SV# Chr Chr_coord_5p Chr_coord_3p TE TE_coord_start TE_coord_end Reads_collapsed Chr_Coord_Dist Symmetry avg_blat_score Norm_RefGen_Reads Coverage_Ratio classification comments insert_code loci_code Sym_score libname 1 chr2L 2621552 2621583 BS 5069 5038 6 31 '1-5 66.45 2.5 1.7 intergenic not near genes chr2L_6_2620001 chr2L_2620001 0.17 pool-EU-PO1 2 chr2L 5790907 5790931 FB 33 10 5 24 '3-2 66.25 10.2 0.4 intron CG9171 - chr2L_5_5790001 chr2L_5790001 0.60 pool-EU-PO1 3 chr2L 8965378 8965419 Juan 6 4187 4 41 '3-1 62.52 4.5 0.7 intron CG32984 + chr2L_4_8965001 chr2L_8965001 0.75 pool-EU-PO1 4 chr2L 10265752 10265824 gtwin 468 5 4 72 '3-1 59.54 7.3 0.5 exon Mob3 + chr2L_4_10265001 chr2L_10265001 0.75 pool-EU-PO1 5 chr2L 12324050 12324091 roo 9047 8681 4 41 '1-3 64.47 7.0 0.5 intergenic not near genes chr2L_4_12320001 chr2L_12320001 0.25 pool-EU-PO1 6 chr2L 14476257 14476312 pogo 2082 12 6 55 '2-4 68.82 5.4 0.9 intergenic not near genes chr2L_6_14475001 chr2L_14475001 0.33 pool-EU-PO1 7 chr2L 15142247 15142306 BS 4703 5079 6 59 '3-3 68.85 5.1 1.0 intergenic not near genes chr2L_6_15140001 chr2L_15140001 0.50 pool-EU-PO1 8 chr2L 15622424 15622464 opus 7026 477 4 40 '1-3 71.71 6.7 0.5 exon Or35a - chr2L_4_15620001 chr2L_15620001 0.25 pool-EU-PO1 9 chr2L 17288681 17288736 Transpac 30 311 5 55 '3-2 72.37 4.0 1.0 intergenic not near genes chr2L_5_17285001 chr2L_17285001 0.60 pool-EU-PO1 10 chr2L 19085205 19085263 invader4 3082 22 5 58 '2-3 69.32 5.4 0.8 intron Lim3 - chr2L_5_19085001 chr2L_19085001 0.40 pool-EU-PO1 11 chr2L 20928073 20928092 Chimpo 8 27 4 19 '3-1 59.54 3.9 0.8 intergenic CG9272 - chr2L_4_20925001 chr2L_20925001 0.75 pool-EU-PO1 12 chr2L 21570227 21570252 Dm88 30 5 7 25 '4-3 63.84 3.4 1.6 intergenic not near genes chr2L_7_21570001 chr2L_21570001 0.57 pool-EU-PO1 13 chr2L 22045105 22045140 jockey 4696 4666 4 35 '2-2 71.24 4.9 0.7 intergenic not near genes chr2L_4_22045001 chr2L_22045001 0.50 pool-EU-PO1 14 chr2L 23068853 23068910 1360 3386 21 5 57 '3-2 67.37 4.9 0.8 intergenic CR43242 +,Spf45 - chr2L_5_23065001 chr2L_23065001 0.60 pool-EU-PO1 15 chr2L 23295814 23295864 micropia 5438 5 7 50 '2-5 61.59 4.1 1.4 intergenic not near genes chr2L_7_23295001 chr2L_23295001 0.29 pool-EU-PO1 16 chr2L 23313669 23313694 S-element 1711 1685 4 25 '3-1 67.00 6.6 0.5 intergenic CG40042 - chr2L_4_23310001 chr2L_23310001 0.75 pool-EU-PO1 17 chr2R 544795 544862 HMS-Beagle 6799 7028 5 67 '3-2 60.59 6.2 0.7 intron CG40378 + chr2R_5_540001 chr2R_540001 0.60 pool-EU-PO1 18 chr2R 2949048 2949101 17.6 479 6945 7 53 '3-4 68.80 6.5 0.9 intron Scp1 - chr2R_7_2945001 chr2R_2945001 0.43 pool-EU-PO1 19 chr2R 3919665 3919682 1360 7 25 8 17 '5-3 57.17 7.5 0.9 intron uex - chr2R_8_3915001 chr2R_3915001 0.62 pool-EU-PO1 20 chr2R 5171947 5171978 pogo 34 2 7 31 '4-3 69.51 3.6 1.5 intergenic not near genes chr2R_7_5170001 chr2R_5170001 0.57 pool-EU-PO1 21 chr2R 5179613 5179663 1360 3361 1 8 50 '3-5 69.38 6.8 1.0 intron Nipped-A - chr2R_8_5175001 chr2R_5175001 0.38 pool-EU-PO1 22 chr2R 5485067 5485134 1360 3382 3382 4 67 '3-1 68.42 7.3 0.5 intron CG30440 - chr2R_4_5485001 chr2R_5485001 0.75 pool-EU-PO1 23 chr2R 6779766 6779831 17.6 7417 6943 8 65 '5-3 68.36 6.1 1.1 intron,3` UTR Epac -,Cyp6a2 - chr2R_8_6775001 chr2R_6775001 0.62 pool-EU-PO1 24 chr2R 8087046 8087099 flea 4995 4764 4 53 '1-3 64.10 6.5 0.5 3` UTR sut1 + chr2R_4_8085001 chr2R_8085001 0.25 pool-EU-PO1 25 chr2R 8143696 8143761 FB 5 9 4 65 '3-1 62.17 6.8 0.5 intron Lpin - chr2R_4_8140001 chr2R_8140001 0.75 pool-EU-PO1 26 chr2R 9272884 9272947 FB 8 4 4 63 '1-3 66.91 4.9 0.7 intron Pkn - chr2R_4_9270001 chr2R_9270001 0.25 pool-EU-PO1 27 chr2R 9408173 9408234 FB 1 17 10 61 '4-6 66.95 3.8 2.1 intron wun - chr2R_10_9405001 chr2R_9405001 0.40 pool-EU-PO1 28 chr2R 9785670 9785737 Burdock 10 6384 4 67 '2-2 54.78 7.7 0.5 intron CG1688 - chr2R_4_9785001 chr2R_9785001 0.50 pool-EU-PO1 29 chr2R 9870971 9871058 roo 411 9055 7 87 '3-4 64.61 4.0 1.4 intron cbx - chr2R_7_9870001 chr2R_9870001 0.43 pool-EU-PO1 30 chr2R 10033188 10033239 Tabor 33 486 5 51 '3-2 68.68 4.3 0.9 intergenic CG12129 +,CG1407 - chr2R_5_10030001 chr2R_10030001 0.60 pool-EU-PO1 31 chr2R 11394107 11394179 pogo 6 2089 4 72 '2-2 60.42 7.1 0.5 intron sprt - chr2R_4_11390001 chr2R_11390001 0.50 pool-EU-PO1 32 chr2R 11575034 11575176 INE-1 145 133 4 142 '1-3 62.46 1.1 1.9 intergenic not near genes chr2R_4_11575001 chr2R_11575001 0.25 pool-EU-PO1 33 chr2R 12185328 12185400 accord 7381 9 12 72 '6-6 65.75 11.4 1.0 3` UTR,3` UTR CG13175 +,CG33964 + chr2R_12_12185001 chr2R_12185001 0.50 pool-EU-PO1 34 chr2R 12416866 12416933 pogo 2088 2 6 67 '2-4 62.74 5.2 1.0 exon CG13157 + chr2R_6_12415001 chr2R_12415001 0.33 pool-EU-PO1 35 chr2R 14883260 14883315 X-element 9 4700 7 55 '4-3 60.86 9.0 0.7 intron Cyp6a20 + chr2R_7_14880001 chr2R_14880001 0.57 pool-EU-PO1 36 chr2R 14921496 14921537 pogo 12 2070 4 41 '3-1 64.95 8.0 0.4 intron CG10249 - chr2R_4_14920001 chr2R_14920001 0.75 pool-EU-PO1 37 chr2R 16664379 16664431 pogo 27 2094 4 52 '1-3 68.24 7.8 0.5 intron Picot - chr2R_4_16660001 chr2R_16660001 0.25 pool-EU-PO1 38 chr2R 23878234 23878307 Transpac 5219 4919 6 73 '1-5 63.32 5.0 1.0 5` UTR TM4SF + chr2R_6_23875001 chr2R_23875001 0.17 pool-EU-PO1 39 chr2R 24021572 24021631 pogo 8 2084 9 59 '5-4 68.18 8.2 1.0 intron CG3907 - chr2R_9_24020001 chr2R_24020001 0.56 pool-EU-PO1 40 chr3L 146474 146547 P-element 4 2885 5 73 '2-3 49.91 7.0 0.6 5` UTR CG6845 + chr3L_5_145001 chr3L_145001 0.40 pool-EU-PO1 41 chr3L 2485673 2486038 jockey 6 4664 4 365 '2-2 67.16 2.3 1.2 intron CG45186 + chr3L_4_2485001 chr3L_2485001 0.50 pool-EU-PO1 42 chr3L 3540131 3540212 mdg3 5496 5251 7 81 '2-5 66.79 5.2 1.1 intron Eip63E + chr3L_7_3540001 chr3L_3540001 0.29 pool-EU-PO1 43 chr3L 3798586 3798628 1360 10 29 5 42 '4-1 64.12 5.1 0.8 intron CG32264 - chr3L_5_3795001 chr3L_3795001 0.80 pool-EU-PO1 44 chr3L 6620577 6620605 accord 192 191 4 28 '3-1 58.91 9.4 0.4 intergenic not near genes chr3L_4_6620001 chr3L_6620001 0.75 pool-EU-PO1 45 chr3L 9442913 9442929 TAHRE 10078 10094 8 16 '6-2 66.69 13.1 0.6 intergenic CG33926 + chr3L_8_9440001 chr3L_9440001 0.75 pool-EU-PO1 46 chr3L 10696972 10697027 pogo 18 2088 4 55 '2-2 64.14 4.6 0.7 intergenic NijA - chr3L_4_10695001 chr3L_10695001 0.50 pool-EU-PO1 47 chr3L 12301215 12301261 hopper 30 1409 5 46 '2-3 63.35 6.5 0.7 5` UTR CR44550 + chr3L_5_12300001 chr3L_12300001 0.40 pool-EU-PO1 48 chr3L 12863696 12863736 Transpac 4929 290 4 40 '2-2 74.91 8.6 0.4 intergenic not near genes chr3L_4_12860001 chr3L_12860001 0.50 pool-EU-PO1 49 chr3L 14049978 14050049 pogo 2 2089 5 71 '3-2 61.11 3.5 1.1 intergenic blue - chr3L_5_14045001 chr3L_14045001 0.60 pool-EU-PO1 50 chr3L 15099575 15099621 G4 3817 3805 5 46 '4-1 63.16 2.8 1.3 intron CTPsyn + chr3L_5_15095001 chr3L_15095001 0.80 pool-EU-PO1 51 chr3L 15919060 15919095 Juan 13 4189 4 35 '2-2 61.07 3.4 0.9 intron sff - chr3L_4_15915001 chr3L_15915001 0.50 pool-EU-PO1 52 chr3L 16973424 16973454 S-element 1686 1715 6 30 '1-5 64.96 3.4 1.4 intron Exn + chr3L_6_16970001 chr3L_16970001 0.17 pool-EU-PO1 53 chr3L 19339394 19339427 Tc1 36 3 5 33 '2-3 69.94 3.5 1.1 intergenic not near genes chr3L_5_19335001 chr3L_19335001 0.40 pool-EU-PO1 54 chr3L 20361715 20361775 pogo 2072 2 9 60 '4-5 69.06 5.6 1.4 intergenic Toll-9 -,DNApol-alpha60 - chr3L_9_20360001 chr3L_20360001 0.44 pool-EU-PO1 55 chr3L 22635690 22635735 hopper 1407 1384 5 45 '2-3 65.26 7.7 0.6 intron CG14459 - chr3L_5_22635001 chr3L_22635001 0.40 pool-EU-PO1 56 chr3L 22744681 22744701 FB 34 15 5 20 '2-3 73.63 4.2 1.0 intron CG7369 + chr3L_5_22740001 chr3L_22740001 0.40 pool-EU-PO1 57 chr3L 24272105 24272126 gypsy11 48 4055 5 21 '2-3 71.14 5.1 0.8 intron Snap25 + chr3L_5_24270001 chr3L_24270001 0.40 pool-EU-PO1 58 chr3L 25272542 25272558 1360 3382 23 8 16 '3-5 61.68 4.6 1.4 intron CG40467 - chr3L_8_25270001 chr3L_25270001 0.38 pool-EU-PO1 59 chr3R 1047976 1048050 Stalker2 396 7247 6 74 '1-5 64.45 1.5 2.4 intron CG15831 + chr3R_6_1045001 chr3R_1045001 0.17 pool-EU-PO1 60 chr3R 4553291 4553401 Juan 4192 1 4 110 '1-3 63.96 2.4 1.2 intron CG34357 - chr3R_4_4550001 chr3R_4550001 0.25 pool-EU-PO1 61 chr3R 4773996 4774072 diver 1 219 5 76 '3-2 62.79 2.9 1.3 intron atms + chr3R_5_4770001 chr3R_4770001 0.60 pool-EU-PO1 62 chr3R 5765345 5765407 17.6 7415 6943 4 62 '2-2 67.53 9.7 0.4 intron CG2082 - chr3R_4_5765001 chr3R_5765001 0.50 pool-EU-PO1 63 chr3R 7475062 7475133 Tc3 312 309 5 71 '2-3 59.85 7.5 0.6 intergenic snRNA:7SK - chr3R_5_7475001 chr3R_7475001 0.40 pool-EU-PO1 64 chr3R 8090522 8090564 P-element 9 2859 4 42 '2-2 43.71 6.9 0.5 intergenic CR44330 + chr3R_4_8090001 chr3R_8090001 0.50 pool-EU-PO1 65 chr3R 13202999 13203072 roo 398 8663 6 73 '2-4 69.01 4.5 1.1 intergenic not near genes chr3R_6_13200001 chr3R_13200001 0.33 pool-EU-PO1 66 chr3R 13231163 13231203 Quasimodo 23 7346 4 40 '2-2 72.70 10.0 0.4 intron Ace - chr3R_4_13230001 chr3R_13230001 0.50 pool-EU-PO1 67 chr3R 13375970 13375988 1360 3380 27 5 18 '2-3 67.09 12.1 0.4 intron CG9813 - chr3R_5_13375001 chr3R_13375001 0.40 pool-EU-PO1 68 chr3R 13437213 13437231 hopper 1392 1414 4 18 '3-1 64.52 9.5 0.4 intergenic not near genes chr3R_4_13435001 chr3R_13435001 0.75 pool-EU-PO1 69 chr3R 14049351 14049420 transib2 11 2821 8 69 '2-6 63.49 5.1 1.3 intergenic not near genes chr3R_8_14045001 chr3R_14045001 0.25 pool-EU-PO1 70 chr3R 15157597 15157658 invader3 5192 5447 4 61 '3-1 64.84 6.8 0.5 intron Gyc88E + chr3R_4_15155001 chr3R_15155001 0.75 pool-EU-PO1 71 chr3R 19436013 19436078 roo 17 408 4 65 '1-3 68.75 7.2 0.5 intron CG31221 + chr3R_4_19435001 chr3R_19435001 0.25 pool-EU-PO1 72 chr3R 19675235 19675301 Stalker4 406 12 4 66 '2-2 60.23 7.1 0.5 intron Naam + chr3R_4_19675001 chr3R_19675001 0.50 pool-EU-PO1 73 chr3R 20308172 20308230 invader4 3072 2772 4 58 '3-1 59.24 4.6 0.7 intergenic not near genes chr3R_4_20305001 chr3R_20305001 0.75 pool-EU-PO1 74 chr3R 20845042 20845121 17.6 1 488 4 79 '1-3 70.68 4.0 0.8 intergenic CG15695 + chr3R_4_20845001 chr3R_20845001 0.25 pool-EU-PO1 75 chr3R 22229008 22229071 412 493 20 4 63 '2-2 68.34 5.9 0.6 intron SKIP + chr3R_4_22225001 chr3R_22225001 0.50 pool-EU-PO1 76 chr3R 24117588 24117637 297 17 6962 4 49 '2-2 70.12 7.7 0.5 intron Rootletin + chr3R_4_24115001 chr3R_24115001 0.50 pool-EU-PO1 77 chr3R 27134887 27134934 gypsy5 6947 404 4 47 '3-1 58.56 5.8 0.6 intron CG6051 - chr3R_4_27130001 chr3R_27130001 0.75 pool-EU-PO1 78 chr3R 27301457 27301506 jockey 4685 25 4 49 '1-3 54.64 7.1 0.5 intron CG3339 - chr3R_4_27300001 chr3R_27300001 0.25 pool-EU-PO1 79 chr3R 28778455 28778528 Stalker2 7650 7 4 73 '2-2 68.86 5.9 0.6 intergenic not near genes chr3R_4_28775001 chr3R_28775001 0.50 pool-EU-PO1 80 chr3R 31458083 31458548 jockey 32 30 4 465 '2-2 66.35 5.2 0.6 intergenic Gprk2 +,lox - chr3R_4_31455001 chr3R_31455001 0.50 pool-EU-PO1 81 chr4 311569 311591 1360 23 3387 4 22 '2-2 63.43 7.3 0.5 3` UTR Zip102B - chr4_4_310001 chr4_310001 0.50 pool-EU-PO1 82 chr4 1294980 1294995 TAHRE 10438 10027 12 15 '1-11 66.98 0.0 12.0 intergenic not near genes chr4_12_1290001 chr4_1290001 0.08 pool-EU-PO1 83 chrX 1418422 1418494 pogo 2 2092 5 72 '3-2 63.49 7.3 0.6 intron futsch + chrX_5_1415001 chrX_1415001 0.60 pool-EU-PO1 84 chrX 1523437 1523732 jockey 4529 35 6 295 '2-4 64.08 3.3 1.4 intergenic not near genes chrX_6_1520001 chrX_1520001 0.33 pool-EU-PO1 85 chrX 2781220 2781291 FB 2 5 12 71 '7-5 68.75 3.8 2.5 intron kirre + chrX_12_2780001 chrX_2780001 0.58 pool-EU-PO1 86 chrX 4356721 4356783 roo 397 8673 4 62 '1-3 60.75 4.6 0.7 intron norpA + chrX_4_4355001 chrX_4355001 0.25 pool-EU-PO1 87 chrX 9514141 9514214 McClintock 5959 478 7 73 '4-3 69.78 4.2 1.3 intron CG32700 - chrX_7_9510001 chrX_9510001 0.57 pool-EU-PO1 88 chrX 11221700 11221721 pogo 10 32 5 21 '4-1 60.81 3.1 1.2 intergenic not near genes chrX_5_11220001 chrX_11220001 0.80 pool-EU-PO1 89 chrX 12886876 12886894 FB 32 15 4 18 '3-1 67.36 10.2 0.4 intron Pde9 - chrX_4_12885001 chrX_12885001 0.75 pool-EU-PO1 90 chrX 14343385 14343472 copia 260 4869 5 87 '2-3 67.04 6.1 0.7 intron dpr8 + chrX_5_14340001 chrX_14340001 0.40 pool-EU-PO1 91 chrX 14592918 14592973 pogo 6 2093 4 55 '3-1 68.61 7.9 0.4 intron CG9413 - chrX_4_14590001 chrX_14590001 0.75 pool-EU-PO1 92 chrX 14826119 14826157 P-element 7 32 4 38 '2-2 46.88 5.4 0.6 intergenic rut - chrX_4_14825001 chrX_14825001 0.50 pool-EU-PO1 93 chrX 15012485 15012504 mdg3 248 5481 5 19 '2-3 59.16 4.3 0.9 exon hiw - chrX_5_15010001 chrX_15010001 0.40 pool-EU-PO1 94 chrX 17837965 17838042 S-element 1714 1714 6 77 '2-4 63.97 6.1 0.8 intron CG6398 + chrX_6_17835001 chrX_17835001 0.33 pool-EU-PO1 95 chrX 18193720 18193785 hopper 2 1403 10 65 '6-4 69.03 3.6 2.2 intron Frq2 + chrX_10_18190001 chrX_18190001 0.60 pool-EU-PO1 96 chrX 19162591 19162640 pogo 2099 13 4 49 '2-2 69.97 8.5 0.4 intron RhoGAP18B - chrX_4_19160001 chrX_19160001 0.50 pool-EU-PO1 97 chrX 19670175 19670227 Juan 4192 1 4 52 '1-3 60.53 4.4 0.7 intron Zw + chrX_4_19670001 chrX_19670001 0.25 pool-EU-PO1 98 chrX 21087580 21087633 mdg3 5251 5490 8 53 '4-4 63.42 2.8 2.1 intergenic not near genes chrX_8_21085001 chrX_21085001 0.50 pool-EU-PO1 99 chrX 21183311 21183375 S-element 1705 1705 5 64 '3-2 65.07 5.9 0.7 intergenic not near genes chrX_5_21180001 chrX_21180001 0.60 pool-EU-PO1 100 chrX 21474417 21474432 1731 4324 4338 5 15 '2-3 71.33 9.9 0.5 intergenic not near genes chrX_5_21470001 chrX_21470001 0.40 pool-EU-PO1 101 chrX 21496486 21496554 3S18 330 2 10 68 '4-6 59.73 4.3 1.9 intergenic CR45082 - chrX_10_21495001 chrX_21495001 0.40 pool-EU-PO1 102 chrX 21589433 21589478 1360 1 3354 6 45 '4-2 69.50 7.1 0.7 intergenic not near genes chrX_6_21585001 chrX_21585001 0.67 pool-EU-PO1 103 chrX 21667899 21667930 gypsy2 6520 6494 9 31 '2-7 65.42 10.0 0.8 intergenic not near genes chrX_9_21665001 chrX_21665001 0.22 pool-EU-PO1 104 chrX 22218813 22218838 1731 4309 22 5 25 '2-3 65.56 0.0 5.0 intergenic not near genes chrX_5_22215001 chrX_22215001 0.40 pool-EU-PO1 105 chrX 22517614 22517672 1360 27 3377 4 58 '1-3 60.53 4.6 0.7 intron CG17600 + chrX_4_22515001 chrX_22515001 0.25 pool-EU-PO1 106 chrX 22871828 22871846 pogo 16 33 4 18 '2-2 66.71 7.7 0.5 intron,3` UTR CG42346 +,CR43656 - chrX_4_22870001 chrX_22870001 0.50 pool-EU-PO1 107 chrY 3630464 3630543 flea 4759 5012 4 79 '1-3 70.73 0.0 4.0 intergenic not near genes chrY_4_3630001 chrY_3630001 0.25 pool-EU-PO1