SV#	Chr	Chr_coord_5p	Chr_coord_3p	TE	TE_coord_start	TE_coord_end	Reads_collapsed	Chr_Coord_Dist	Symmetry	avg_blat_score	Norm_RefGen_Reads	Coverage_Ratio	classification	comments	insert_code	loci_code	Sym_score	libname
1	chr2L	451254	451339	FB	19	7	6	85	'3-3	61.92	3.9	1.2	intron	crq -	chr2L_6_450001	chr2L_450001	0.50	pool-EU-IT-DF1
2	chr2L	3174648	3174741	Ivk	5368	5314	5	93	'3-2	60.82	4.0	1.0	intergenic	CG15404 +	chr2L_5_3170001	chr2L_3170001	0.60	pool-EU-IT-DF1
3	chr2L	5724297	5724362	1360	10	37	4	65	'2-2	64.94	2.5	1.1	intergenic	sip1 +,CG11030 +	chr2L_4_5720001	chr2L_5720001	0.50	pool-EU-IT-DF1
4	chr2L	7937229	7937325	BS	5081	5085	5	96	'3-2	66.46	2.2	1.6	intron	Snoo -	chr2L_5_7935001	chr2L_7935001	0.60	pool-EU-IT-DF1
5	chr2L	8205169	8205204	P-element	2848	2883	5	35	'4-1	48.36	4.4	0.9	5` UTR	CR44119 +	chr2L_5_8205001	chr2L_8205001	0.80	pool-EU-IT-DF1
6	chr2L	8959907	8959993	Ivk	5097	5367	4	86	'1-3	56.34	2.9	1.0	3` UTR	CG9525 -	chr2L_4_8955001	chr2L_8955001	0.25	pool-EU-IT-DF1
7	chr2L	8965368	8965419	Juan	12	4168	6	51	'2-4	66.38	2.5	1.7	exon	CG32984 +	chr2L_6_8965001	chr2L_8965001	0.33	pool-EU-IT-DF1
8	chr2L	13437049	13437117	Juan	4181	4029	4	68	'1-3	68.21	7.9	0.4	intron,intron	CG42784 +,Tehao +	chr2L_4_13435001	chr2L_13435001	0.25	pool-EU-IT-DF1
9	chr2L	18570499	18570567	FB	6	6	7	68	'3-4	64.69	5.1	1.1	intron	Pde11 -	chr2L_7_18570001	chr2L_18570001	0.43	pool-EU-IT-DF1
10	chr2L	21191337	21191449	297	393	6584	5	112	'2-3	73.76	4.2	1.0	intron	Ret -	chr2L_5_21190001	chr2L_21190001	0.40	pool-EU-IT-DF1
11	chr2L	21403527	21403553	G5	4413	4393	7	26	'4-3	60.30	1.1	3.3	intergenic	not near genes	chr2L_7_21400001	chr2L_21400001	0.57	pool-EU-IT-DF1
12	chr2L	21570229	21570263	Dm88	4404	10	5	34	'3-2	66.70	2.9	1.3	intergenic	not near genes	chr2L_5_21570001	chr2L_21570001	0.60	pool-EU-IT-DF1
13	chr2L	22224549	22224574	Rt1c	5395	5420	5	25	'1-4	53.26	0.8	2.8	intergenic	not near genes	chr2L_5_22220001	chr2L_22220001	0.20	pool-EU-IT-DF1
14	chr2L	23068836	23068934	1360	3387	13	8	98	'5-3	64.66	4.6	1.4	intergenic	CR43242 +,Spf45 -	chr2L_8_23065001	chr2L_23065001	0.62	pool-EU-IT-DF1
15	chr2L	23313649	23313757	S-element	2	1704	4	108	'3-1	74.27	2.5	1.1	intergenic	CG40042 -	chr2L_4_23310001	chr2L_23310001	0.75	pool-EU-IT-DF1
16	chr2R	544785	544814	HMS-Beagle	6805	6834	6	29	'2-4	63.42	4.2	1.2	intron	CG40378 +	chr2R_6_540001	chr2R_540001	0.33	pool-EU-IT-DF1
17	chr2R	969160	969207	mdg1	36	390	4	47	'1-3	69.84	5.5	0.6	intergenic	not near genes	chr2R_4_965001	chr2R_965001	0.25	pool-EU-IT-DF1
18	chr2R	4339498	4339735	G5A	2794	2767	6	237	'5-1	75.33	2.3	1.8	intron	Gprk1 -	chr2R_6_4335001	chr2R_4335001	0.83	pool-EU-IT-DF1
19	chr2R	5674640	5674743	S-element	1706	1707	7	103	'5-2	67.35	3.2	1.7	intergenic	not near genes	chr2R_7_5670001	chr2R_5670001	0.71	pool-EU-IT-DF1
20	chr2R	6565005	6565108	blood	7020	375	12	103	'8-4	63.14	2.6	3.3	intron	jing +	chr2R_12_6565001	chr2R_6565001	0.67	pool-EU-IT-DF1
21	chr2R	6779755	6779849	17.6	491	6942	9	94	'5-4	65.54	4.1	1.8	intron,3` UTR	Epac -,Cyp6a2 -	chr2R_9_6775001	chr2R_6775001	0.56	pool-EU-IT-DF1
22	chr2R	8143683	8143767	FB	8	19	5	84	'3-2	61.57	5.8	0.7	intron	Lpin -	chr2R_5_8140001	chr2R_8140001	0.60	pool-EU-IT-DF1
23	chr2R	9552745	9552783	P-element	46	8	7	38	'3-4	50.85	6.0	1.0	intergenic	CR43651 +	chr2R_7_9550001	chr2R_9550001	0.43	pool-EU-IT-DF1
24	chr2R	9871003	9871069	roo	9025	5	5	66	'1-4	70.37	3.1	1.2	intron	cbx -	chr2R_5_9870001	chr2R_9870001	0.20	pool-EU-IT-DF1
25	chr2R	11394104	11394201	pogo	18	2095	4	97	'1-3	55.02	2.8	1.1	intron	sprt -	chr2R_4_11390001	chr2R_11390001	0.25	pool-EU-IT-DF1
26	chr2R	11659045	11659112	1360	4	3347	4	67	'2-2	71.47	5.1	0.7	intron	Roc2 -	chr2R_4_11655001	chr2R_11655001	0.50	pool-EU-IT-DF1
27	chr2R	12185312	12185422	accord	7381	3	14	110	'9-5	67.81	6.5	1.9	3` UTR,3` UTR	CG13175 +,CG33964 +	chr2R_14_12185001	chr2R_12185001	0.64	pool-EU-IT-DF1
28	chr2R	14921484	14921560	pogo	15	2075	4	76	'2-2	62.68	5.2	0.6	intron	CG10249 -	chr2R_4_14920001	chr2R_14920001	0.50	pool-EU-IT-DF1
29	chr2R	15798144	15798187	roo	8661	8693	4	43	'1-3	71.12	3.6	0.9	intron,intron	Zasp52 -,tun +	chr2R_4_15795001	chr2R_15795001	0.25	pool-EU-IT-DF1
30	chr2R	16891834	16891859	hopper	13	37	5	25	'2-3	61.13	6.5	0.7	intron	CG8910 -	chr2R_5_16890001	chr2R_16890001	0.40	pool-EU-IT-DF1
31	chr2R	22317224	22317290	BS	5018	5082	4	66	'3-1	56.30	4.1	0.8	intergenic	Gp150 +	chr2R_4_22315001	chr2R_22315001	0.75	pool-EU-IT-DF1
32	chr2R	23925042	23925133	1360	3385	18	4	91	'3-1	60.05	3.7	0.9	3` UTR	kcc +	chr2R_4_23925001	chr2R_23925001	0.75	pool-EU-IT-DF1
33	chr3L	3540114	3540223	mdg3	5496	5256	4	109	'1-3	66.30	4.2	0.8	intron	Eip63E +	chr3L_4_3540001	chr3L_3540001	0.25	pool-EU-IT-DF1
34	chr3L	3798570	3798602	1360	10	3372	4	32	'1-3	66.14	7.0	0.5	intron	CG32264 -	chr3L_4_3795001	chr3L_3795001	0.25	pool-EU-IT-DF1
35	chr3L	5438739	5438829	hopper	1401	1406	4	90	'1-3	61.58	2.4	1.2	intron	CG34391 +	chr3L_4_5435001	chr3L_5435001	0.25	pool-EU-IT-DF1
36	chr3L	8270562	8270666	pogo	10	2098	5	104	'1-4	68.20	5.1	0.8	exon	Dscam4 +	chr3L_5_8270001	chr3L_8270001	0.20	pool-EU-IT-DF1
37	chr3L	11661705	11661800	hopper	1403	1405	6	95	'4-2	61.20	2.5	1.7	intron	CG32085 -	chr3L_6_11660001	chr3L_11660001	0.67	pool-EU-IT-DF1
38	chr3L	14049977	14050075	pogo	19	2099	5	98	'1-4	65.27	1.8	1.8	intergenic	blue -	chr3L_5_14045001	chr3L_14045001	0.20	pool-EU-IT-DF1
39	chr3L	15035148	15035205	pogo	2061	15	7	57	'2-5	72.93	4.1	1.4	intron	Sytbeta -	chr3L_7_15035001	chr3L_15035001	0.29	pool-EU-IT-DF1
40	chr3L	15099565	15099639	G4	3811	3803	7	74	'5-2	56.27	2.8	1.8	intron	CTPsyn +	chr3L_7_15095001	chr3L_15095001	0.71	pool-EU-IT-DF1
41	chr3L	18357312	18357370	Juan	4193	4	4	58	'1-3	60.79	4.1	0.8	intergenic	not near genes	chr3L_4_18355001	chr3L_18355001	0.25	pool-EU-IT-DF1
42	chr3L	18643592	18643650	FB	48	4	4	58	'3-1	74.66	5.9	0.6	intron	MYPT-75D +	chr3L_4_18640001	chr3L_18640001	0.75	pool-EU-IT-DF1
43	chr3L	19274817	19274896	transib2	22	2823	7	79	'3-4	68.26	4.3	1.3	intergenic	not near genes	chr3L_7_19270001	chr3L_19270001	0.43	pool-EU-IT-DF1
44	chr3L	19349933	19350002	1360	3380	3214	5	69	'3-2	52.27	2.6	1.4	intron	CG32206 -	chr3L_5_19345001	chr3L_19345001	0.60	pool-EU-IT-DF1
45	chr3L	19396920	19396947	Doc	24	19	4	27	'1-3	62.73	5.5	0.6	intron	CG32206 -	chr3L_4_19395001	chr3L_19395001	0.25	pool-EU-IT-DF1
46	chr3L	19788170	19788205	FB	40	5	5	35	'2-3	67.39	3.5	1.1	intron,intron	CG42637 -,Gyc76C -	chr3L_5_19785001	chr3L_19785001	0.40	pool-EU-IT-DF1
47	chr3L	19951181	19951284	Ivk	1	5378	11	103	'6-5	66.10	3.8	2.3	intron	Ac76E +	chr3L_11_19950001	chr3L_19950001	0.55	pool-EU-IT-DF1
48	chr3L	20490655	20490714	FB	854	37	5	59	'3-2	64.35	7.9	0.6	intron	ZnT77C -	chr3L_5_20490001	chr3L_20490001	0.60	pool-EU-IT-DF1
49	chr3L	22111056	22111144	Burdock	251	24	4	88	'3-1	69.02	4.1	0.8	intergenic	not near genes	chr3L_4_22110001	chr3L_22110001	0.75	pool-EU-IT-DF1
50	chr3L	22635685	22635759	hopper	15	1392	4	74	'2-2	60.65	5.3	0.6	intron	CG14459 -	chr3L_4_22635001	chr3L_22635001	0.50	pool-EU-IT-DF1
51	chr3L	23382500	23382618	roo	408	8661	5	118	'4-1	70.65	3.8	1.0	intergenic	not near genes	chr3L_5_23380001	chr3L_23380001	0.80	pool-EU-IT-DF1
52	chr3R	4774262	4774288	roo	9041	395	4	26	'3-1	66.89	11.6	0.3	intron	atms +	chr3R_4_4770001	chr3R_4770001	0.75	pool-EU-IT-DF1
53	chr3R	5245571	5245654	1360	8	3368	5	83	'3-2	63.85	3.8	1.0	intron	CG12163 -	chr3R_5_5245001	chr3R_5245001	0.60	pool-EU-IT-DF1
54	chr3R	7491777	7491847	invader6	344	17	6	70	'2-4	59.99	5.3	1.0	intron	alpha-Est10 -	chr3R_6_7490001	chr3R_7490001	0.33	pool-EU-IT-DF1
55	chr3R	7492431	7492495	1360	3342	3387	5	64	'1-4	69.90	4.4	0.9	intron	alpha-Est10 -	chr3R_5_7490001	chr3R_7490001	0.20	pool-EU-IT-DF1
56	chr3R	7715322	7715431	roo	8672	411	4	109	'2-2	69.38	4.3	0.8	intergenic	not near genes	chr3R_4_7715001	chr3R_7715001	0.50	pool-EU-IT-DF1
57	chr3R	8007497	8007591	copia	4891	259	4	94	'2-2	63.52	5.2	0.6	exon	CG2767 -	chr3R_4_8005001	chr3R_8005001	0.50	pool-EU-IT-DF1
58	chr3R	8938939	8939004	P-element	6	2861	4	65	'2-2	49.92	3.1	1.0	intron	skap +	chr3R_4_8935001	chr3R_8935001	0.50	pool-EU-IT-DF1
59	chr3R	12719947	12720057	P-element	2860	2880	5	110	'2-3	42.55	2.9	1.3	exon	Men -	chr3R_5_12715001	chr3R_12715001	0.40	pool-EU-IT-DF1
60	chr3R	13167318	13167412	roo	9052	8664	4	94	'1-3	59.73	2.5	1.1	intergenic	not near genes	chr3R_4_13165001	chr3R_13165001	0.25	pool-EU-IT-DF1
61	chr3R	14049330	14049434	transib2	6	2820	8	104	'3-5	68.69	3.0	2.0	intergenic	not near genes	chr3R_8_14045001	chr3R_14045001	0.38	pool-EU-IT-DF1
62	chr3R	22190162	22190235	Juan	4194	4036	5	73	'2-3	60.65	3.8	1.0	intron	SKIP +	chr3R_5_22190001	chr3R_22190001	0.40	pool-EU-IT-DF1
63	chr3R	22979326	22979391	Juan	4077	4179	4	65	'2-2	70.55	3.3	0.9	intergenic	not near genes	chr3R_4_22975001	chr3R_22975001	0.50	pool-EU-IT-DF1
64	chr3R	25552360	25552447	17.6	6948	483	4	87	'2-2	65.67	6.2	0.6	intron	msi +	chr3R_4_25550001	chr3R_25550001	0.50	pool-EU-IT-DF1
65	chr3R	29764798	29764863	pogo	2072	24	5	65	'1-4	61.96	6.7	0.6	intergenic	not near genes	chr3R_5_29760001	chr3R_29760001	0.20	pool-EU-IT-DF1
66	chr3R	29952694	29952795	invader4	2775	3080	6	101	'4-2	59.60	4.5	1.1	intron	TkR99D -	chr3R_6_29950001	chr3R_29950001	0.67	pool-EU-IT-DF1
67	chrX	264033	264057	P-element	2860	2852	4	24	'3-1	41.41	7.4	0.5	intron	CR43906 +	chrX_4_260001	chrX_260001	0.75	pool-EU-IT-DF1
68	chrX	1599398	1599470	hopper	1376	1412	4	72	'2-2	68.45	3.1	1.0	intron,intron	Mur2B -,br +	chrX_4_1595001	chrX_1595001	0.50	pool-EU-IT-DF1
69	chrX	3657129	3657224	Bari1	1701	18	5	95	'4-1	62.74	4.2	1.0	intron	AstA-R1 +	chrX_5_3655001	chrX_3655001	0.80	pool-EU-IT-DF1
70	chrX	3771381	3771482	roo	400	6	4	101	'2-2	69.61	4.2	0.8	intron	tlk +	chrX_4_3770001	chrX_3770001	0.50	pool-EU-IT-DF1
71	chrX	8038772	8038797	297	37	6593	4	25	'1-3	66.05	10.0	0.4	3` UTR	fs(1)h -	chrX_4_8035001	chrX_8035001	0.25	pool-EU-IT-DF1
72	chrX	9514118	9514215	McClintock	2	6417	6	97	'2-4	66.25	3.4	1.4	intron	CG32700 -	chrX_6_9510001	chrX_9510001	0.33	pool-EU-IT-DF1
73	chrX	10119553	10119629	FB	22	23	4	76	'3-1	57.40	3.5	0.9	intron,intron	RhoU +,CR44894 -	chrX_4_10115001	chrX_10115001	0.75	pool-EU-IT-DF1
74	chrX	11221702	11221781	pogo	25	2091	4	79	'2-2	65.18	2.5	1.1	intergenic	not near genes	chrX_4_11220001	chrX_11220001	0.50	pool-EU-IT-DF1
75	chrX	15903168	15903318	INE-1	97	93	6	150	'1-5	58.12	1.8	2.1	intron	shi +	chrX_6_15900001	chrX_15900001	0.17	pool-EU-IT-DF1
76	chrX	17837950	17837986	S-element	4	37	8	36	'1-7	70.92	6.5	1.1	intron	CG6398 +	chrX_8_17835001	chrX_17835001	0.12	pool-EU-IT-DF1
77	chrX	20099912	20099941	S-element	1707	1678	5	29	'2-3	63.91	5.7	0.7	intergenic	not near genes	chrX_5_20095001	chrX_20095001	0.40	pool-EU-IT-DF1
78	chrX	21087584	21087614	mdg3	5272	36	5	30	'4-1	59.47	2.1	1.6	intergenic	not near genes	chrX_5_21085001	chrX_21085001	0.80	pool-EU-IT-DF1
79	chrX	21204980	21205068	1360	3378	20	5	88	'4-1	54.56	2.0	1.7	intergenic	CG32521 -	chrX_5_21200001	chrX_21200001	0.80	pool-EU-IT-DF1
80	chrX	22517548	22517684	1360	3387	3374	9	136	'1-8	56.76	1.7	3.3	intron	CG17600 +	chrX_9_22515001	chrX_22515001	0.11	pool-EU-IT-DF1
81	chrX	23108293	23108335	BS3	1446	1404	14	42	'5-9	61.99	9.1	1.4	3` UTR	ATbp +	chrX_14_23105001	chrX_23105001	0.36	pool-EU-IT-DF1