SV#	Chr_5p	Chr_coord_5p_start	Chr_coord_5p_end	Chr_3p	Chr_coord_3p_start	Chr_coord_3p_end	repName	Reads_collapsed	avg_del_len	RefGen_3prime	Refgen_5prime	RefGen_Avg	Coverage_Ratio	size	Chr_5p	Chr_coord_5p	classification_5p	comment_5p	Chr_mid	Chr_coord_mid	classification_mid	comment_mid	Chr_3p	Chr_coord_3p	classification_3p	comment_3p	depletion_code	loci_code	libname
1	chr2L	47440	47478	chr2L	52570	52608	jockey	18	5130	14.0	12.0	13.0	1.3	5168	chr2L	47440	intron	Cda5 -	chr2L	50024	intron	Cda5 -	chr2L	52608	intron	Cda5 -	chr2L_18_50001	chr2L_50001	OreR-AS-FC
6	chr2L	347863	347906	chr2L	355388	355431	blood	7	7525	2.5	5.0	3.8	1.5	7568	chr2L	347863	3` UTR	Plc21C +	chr2L	351647	intron	Plc21C +	chr2L	355431	3` UTR	Plc21C +	chr2L_7_350001	chr2L_350001	OreR-AS-FC
15	chr2L	686915	686939	chr2L	695980	696004	roo	7	9065	9.5	2.5	6.0	1.0	9089	chr2L	686915	intron	ds -	chr2L	691460	intron	ds -	chr2L	696004	intron	ds -	chr2L_7_690001	chr2L_690001	OreR-AS-FC
18	chr2L	770443	770492	chr2L	772249	772298	Bari1	35	1806	11.0	15.0	13.0	2.5	1855	chr2L	770443	intergenic	not near genes	chr2L	771370	intergenic	not near genes	chr2L	772298	intergenic	CR44614 +	chr2L_35_770001	chr2L_770001	OreR-AS-FC
25	chr2L	976859	976900	chr2L	984520	984561	roo	9	7661	7.5	6.0	6.8	1.2	7702	chr2L	976859	intergenic	not near genes	chr2L	980710	intergenic	not near genes	chr2L	984561	intergenic	not near genes	chr2L_9_980001	chr2L_980001	OreR-AS-FC
26	chr2L	996711	996744	chr2L	1005820	1005864	roo	7	9118	4.0	4.0	4.0	1.4	9153	chr2L	996711	intergenic	not near genes	chr2L	1001288	intergenic	not near genes	chr2L	1005864	intergenic	not near genes	chr2L_7_1000001	chr2L_1000001	OreR-AS-FC
33	chr2L	1220107	1220160	chr2L	1227598	1227651	blood	20	7491	3.5	1.0	2.2	6.2	7544	chr2L	1220107	intron	CG42329 +	chr2L	1223879	intron	CG42329 +	chr2L	1227651	intron	CG42329 +	chr2L_20_1220001	chr2L_1220001	OreR-AS-FC
36	chr2L	1301750	1301781	chr2L	1302312	1302345	gypsy	4	562	0.0	3.5	1.8	1.4	595	chr2L	1301750	intergenic	not near genes	chr2L	1302048	intergenic	not near genes	chr2L	1302345	intergenic	not near genes	chr2L_4_1300001	chr2L_1300001	OreR-AS-FC
42	chr2L	1570667	1570713	chr2L	1573564	1573610	F-element	12	2897	7.0	9.0	8.0	1.3	2943	chr2L	1570667	intron	haf +	chr2L	1572138	intron	haf +	chr2L	1573610	intron	haf +	chr2L_12_1570001	chr2L_1570001	OreR-AS-FC
46	chr2L	1678946	1678955	chr2L	1686454	1686463	blood	6	7508	6.5	11.5	9.0	0.6	7517	chr2L	1678946	intron	chinmo +	chr2L	1682704	intron	chinmo +	chr2L	1686463	intron	chinmo +	chr2L_6_1680001	chr2L_1680001	OreR-AS-FC
47	chr2L	1678962	1679003	chr2L	1686452	1686493	blood	5	7490	3.0	10.5	6.8	0.6	7531	chr2L	1678962	intron	chinmo +	chr2L	1682728	intron	chinmo +	chr2L	1686493	intron	chinmo +	chr2L_5_1680001	chr2L_1680001	OreR-AS-FC
48	chr2L	1711335	1711387	chr2L	1711684	1711736	mdg3	44	349	14.5	15.5	15.0	2.8	401	chr2L	1711335	3` UTR,3` UTR	mRpL48 +,frtz -	chr2L	1711536	3` UTR	frtz -	chr2L	1711736	3` UTR	frtz -	chr2L_44_1710001	chr2L_1710001	OreR-AS-FC
61	chr2L	2100375	2100405	chr2L	2109551	2109581	roo	12	9176	7.5	20.0	13.8	0.8	9206	chr2L	2100375	intron	dpr3 -	chr2L	2104978	intron	dpr3 -	chr2L	2109581	intron	dpr3 -	chr2L_12_2100001	chr2L_2100001	OreR-AS-FC
62	chr2L	2112088	2112143	chr2L	2119775	2119830	opus	22	7687	4.5	11.0	7.8	2.5	7742	chr2L	2112088	intergenic	not near genes	chr2L	2115959	intergenic	not near genes	chr2L	2119830	intergenic	not near genes	chr2L_22_2115001	chr2L_2115001	OreR-AS-FC
69	chr2L	2294017	2294069	chr2L	2299247	2299299	copia	40	5230	12.0	15.0	13.5	2.8	5282	chr2L	2294017	intergenic	not near genes	chr2L	2296658	intergenic	not near genes	chr2L	2299299	intergenic	not near genes	chr2L_40_2295001	chr2L_2295001	OreR-AS-FC
76	chr2L	2565525	2565562	chr2L	2571618	2571660	297	13	6094	17.5	14.0	15.8	0.8	6135	chr2L	2565525	exon	Cyp309a2 -	chr2L	2568592	intron	Cyp309a2 -	chr2L	2571660	exon	Cyp309a2 -	chr2L_13_2565001	chr2L_2565001	OreR-AS-FC
82	chr2L	2661183	2661228	chr2L	2663046	2663091	I-element	15	1863	4.5	14.5	9.5	1.4	1908	chr2L	2661183	intergenic	not near genes	chr2L	2662137	intergenic	not near genes	chr2L	2663091	intergenic	not near genes	chr2L_15_2660001	chr2L_2660001	OreR-AS-FC
86	chr2L	2772593	2772624	chr2L	2779200	2779233	297	15	6607	10.5	8.0	9.2	1.5	6640	chr2L	2772593	3` UTR	Syt1 -	chr2L	2775913	intron	Syt1 -	chr2L	2779233	3` UTR	Syt1 -	chr2L_15_2775001	chr2L_2775001	OreR-AS-FC
90	chr2L	2933289	2933318	chr2L	2935491	2935520	pogo	4	2202	39.5	26.5	33.0	0.1	2231	chr2L	2933289	intron	lilli +	chr2L	2934404	intron	lilli +	chr2L	2935520	intron	lilli +	chr2L_4_2930001	chr2L_2930001	OreR-AS-FC
94	chr2L	3073014	3073060	chr2L	3078242	3078288	copia	17	5228	10.0	15.5	12.8	1.2	5274	chr2L	3073014	intron	toc -	chr2L	3075651	intron	toc -	chr2L	3078288	intron	toc -	chr2L_17_3075001	chr2L_3075001	OreR-AS-FC
105	chr2L	3202711	3202759	chr2L	3210165	3210213	mdg1	10	7454	3.0	0.5	1.8	3.6	7502	chr2L	3202711	intergenic	not near genes	chr2L	3206462	intergenic	not near genes	chr2L	3210213	intergenic	CR45336 +	chr2L_10_3205001	chr2L_3205001	OreR-AS-FC
109	chr2L	3251471	3251523	chr2L	3259061	3259113	springer	14	7590	4.5	6.5	5.5	2.2	7642	chr2L	3251471	intergenic	not near genes	chr2L	3255292	intergenic	not near genes	chr2L	3259113	intergenic	not near genes	chr2L_14_3255001	chr2L_3255001	OreR-AS-FC
114	chr2L	3388578	3388611	chr2L	3388844	3388877	pogo	8	266	2.0	3.0	2.5	2.3	299	chr2L	3388578	intergenic	CG42460 -	chr2L	3388728	intergenic	CG42460 -	chr2L	3388877	intergenic	CG42460 -,CR44791 +	chr2L_8_3385001	chr2L_3385001	OreR-AS-FC
120	chr2L	3649767	3649801	chr2L	3654994	3655028	copia	6	5227	0.0	2.5	1.2	2.7	5261	chr2L	3649767	intron	for -	chr2L	3652398	intron	for -	chr2L	3655028	intron	for -	chr2L_6_3650001	chr2L_3650001	OreR-AS-FC
133	chr2L	4066021	4066056	chr2L	4068871	4068906	Juan	8	2850	7.0	5.0	6.0	1.1	2885	chr2L	4066021	intron	ed +	chr2L	4067464	intron	ed +	chr2L	4068906	intron	ed +	chr2L_8_4065001	chr2L_4065001	OreR-AS-FC
140	chr2L	4181292	4181302	chr2L	4183949	4183959	Burdock	5	2657	4.5	19.5	12.0	0.4	2667	chr2L	4181292	intergenic	not near genes	chr2L	4182626	intergenic	not near genes	chr2L	4183959	intergenic	not near genes	chr2L_5_4180001	chr2L_4180001	OreR-AS-FC
146	chr2L	4601679	4601731	chr2L	4609145	4609197	mdg1	27	7466	6.5	5.0	5.8	4.0	7518	chr2L	4601679	intron	dp -	chr2L	4605438	intron	dp -	chr2L	4609197	intron	dp -	chr2L_27_4605001	chr2L_4605001	OreR-AS-FC
148	chr2L	4661825	4661855	chr2L	4669430	4669460	opus	10	7605	2.0	17.5	9.8	0.9	7635	chr2L	4661825	intergenic	not near genes	chr2L	4665642	intergenic	not near genes	chr2L	4669460	intergenic	not near genes	chr2L_10_4665001	chr2L_4665001	OreR-AS-FC
155	chr2L	4918151	4918192	chr2L	4923249	4923290	jockey	9	5098	4.0	4.5	4.2	1.7	5139	chr2L	4918151	intron	hoe1 -	chr2L	4920720	intron	hoe1 -	chr2L	4923290	intron	hoe1 -	chr2L_9_4920001	chr2L_4920001	OreR-AS-FC
157	chr2L	4953494	4953510	chr2L	4953760	4953776	pogo	6	266	14.5	0.0	7.2	0.7	282	chr2L	4953494	intergenic	Jon25Bii -	chr2L	4953635	intergenic	Jon25Bii -	chr2L	4953776	intergenic	not near genes	chr2L_6_4950001	chr2L_4950001	OreR-AS-FC
174	chr2L	5827686	5827732	chr2L	5836719	5836765	roo	7	9033	15.5	5.5	10.5	0.6	9079	chr2L	5827686	intron	TrissinR +	chr2L	5832226	intron	TrissinR +	chr2L	5836765	intron	TrissinR +	chr2L_7_5830001	chr2L_5830001	OreR-AS-FC
192	chr2L	6279622	6279654	chr2L	6279726	6279758	INE-1	4	104	2.0	0.5	1.2	1.8	136	chr2L	6279622	intron	Ddr +	chr2L	6279690	intron	Ddr +	chr2L	6279758	intron	Ddr +	chr2L_4_6275001	chr2L_6275001	OreR-AS-FC
197	chr2L	6363125	6363177	chr2L	6366076	6366128	Burdock	21	2949	4.0	8.5	6.2	2.9	3003	chr2L	6363125	intergenic	not near genes	chr2L	6364626	intergenic	not near genes	chr2L	6366128	intergenic	not near genes	chr2L_21_6360001	chr2L_6360001	OreR-AS-FC
198	chr2L	6426832	6426883	chr2L	6445117	6445168	roo	37	18285	11.5	11.5	11.5	3.0	18336	chr2L	6426832	3` UTR	CG9527 -	chr2L	6436000	intron	CG9527 -	chr2L	6445168	exon	CG9527 -	chr2L_37_6435001	chr2L_6435001	OreR-AS-FC
214	chr2L	6876755	6876809	chr2L	6882971	6883025	diver	21	6216	6.0	8.0	7.0	2.6	6270	chr2L	6876755	intron	Nlg2 +	chr2L	6879890	intron	Nlg2 +	chr2L	6883025	intron	Nlg2 +	chr2L_21_6875001	chr2L_6875001	OreR-AS-FC
227	chr2L	7343301	7343352	chr2L	7350442	7350493	roo	30	7141	11.5	12.0	11.8	2.3	7192	chr2L	7343301	intron	Wnt6 +	chr2L	7346897	intron	Wnt6 +	chr2L	7350493	intron	Wnt6 +	chr2L_30_7345001	chr2L_7345001	OreR-AS-FC
233	chr2L	7548091	7548106	chr2L	7550554	7550567	Burdock	5	2463	7.0	10.0	8.5	0.5	2476	chr2L	7548091	intron	RapGAP1 -	chr2L	7549329	intron	RapGAP1 -	chr2L	7550567	intron	RapGAP1 -	chr2L_5_7545001	chr2L_7545001	OreR-AS-FC
240	chr2L	7959019	7959073	chr2L	7960455	7960509	pogo	8	1436	1.0	6.0	3.5	1.8	1490	chr2L	7959019	intron	Snoo -	chr2L	7959764	intron	Snoo -	chr2L	7960509	intron	Snoo -	chr2L_8_7955001	chr2L_7955001	OreR-AS-FC
241	chr2L	7977065	7977113	chr2L	7984066	7984114	297	24	7001	6.0	16.0	11.0	2.0	7049	chr2L	7977065	intron	Snoo -	chr2L	7980590	intron	Snoo -	chr2L	7984114	intron,5` UTR	Snoo -,CG7231 +	chr2L_24_7980001	chr2L_7980001	OreR-AS-FC
243	chr2L	8013593	8013599	chr2L	8018822	8018828	copia	4	5229	12.5	0.0	6.2	0.6	5235	chr2L	8013593	intron	Tg +	chr2L	8016210	intron	Tg +	chr2L	8018828	intron	Tg +	chr2L_4_8015001	chr2L_8015001	OreR-AS-FC
244	chr2L	8018818	8018836	chr2L	8023627	8023645	Doc	6	4809	0.0	5.5	2.8	1.6	4827	chr2L	8018818	intron	Tg +	chr2L	8021232	intron	Tg +	chr2L	8023645	intron	Tg +	chr2L_6_8020001	chr2L_8020001	OreR-AS-FC
257	chr2L	8452405	8452442	chr2L	8461601	8461638	roo	12	9196	5.5	5.0	5.2	1.9	9233	chr2L	8452405	intron	fu12 -	chr2L	8457022	intron	fu12 -	chr2L	8461638	intron	fu12 -	chr2L_12_8455001	chr2L_8455001	OreR-AS-FC
261	chr2L	8594442	8594488	chr2L	8601521	8601567	297	14	7079	17.5	2.0	9.8	1.3	7125	chr2L	8594442	intron,3` UTR	Sema-1a +,CR43855 -	chr2L	8598004	intron	Sema-1a +	chr2L	8601567	intron	Sema-1a +	chr2L_14_8595001	chr2L_8595001	OreR-AS-FC
268	chr2L	8723092	8723141	chr2L	8731494	8731543	Tirant	23	8402	10.5	10.0	10.2	2.1	8451	chr2L	8723092	intron	raw -	chr2L	8727318	intron	raw -	chr2L	8731543	intron	raw -	chr2L_23_8725001	chr2L_8725001	OreR-AS-FC
276	chr2L	9000259	9000306	chr2L	9007794	9007841	roo	25	7535	10.5	2.0	6.2	3.5	7582	chr2L	9000259	intergenic	Try29F +	chr2L	9004050	intergenic	not near genes	chr2L	9007841	intergenic	not near genes	chr2L_25_9000001	chr2L_9000001	OreR-AS-FC
282	chr2L	9217972	9218004	chr2L	9222784	9222824	Doc	4	4814	1.5	0.0	0.8	2.2	4852	chr2L	9217972	intron	tai +	chr2L	9220398	intron	tai +	chr2L	9222824	intron	tai +	chr2L_4_9220001	chr2L_9220001	OreR-AS-FC
294	chr2L	9393472	9393527	chr2L	9396464	9396519	jockey	20	2992	6.5	6.0	6.2	2.8	3047	chr2L	9393472	intron	Shawl -	chr2L	9394996	intron	Shawl -	chr2L	9396519	intron	Shawl -	chr2L_20_9390001	chr2L_9390001	OreR-AS-FC
305	chr2L	9973703	9973757	chr2L	9980847	9980901	HMS-Beagle	44	7144	13.0	14.5	13.8	3.0	7198	chr2L	9973703	intergenic	not near genes	chr2L	9977302	intergenic	not near genes	chr2L	9980901	intergenic	not near genes	chr2L_44_9975001	chr2L_9975001	OreR-AS-FC
312	chr2L	10156306	10156349	chr2L	10163801	10163844	blood	12	7495	4.0	7.0	5.5	1.8	7538	chr2L	10156306	intron,3` UTR	CG44153 -,CG4839 +	chr2L	10160075	intron	CG44153 -	chr2L	10163844	intron	CG44153 -	chr2L_12_10160001	chr2L_10160001	OreR-AS-FC
324	chr2L	10592820	10592872	chr2L	10600506	10600559	opus	13	7687	4.0	4.0	4.0	2.6	7739	chr2L	10592820	intron	Trim9 +	chr2L	10596690	intron	Trim9 +	chr2L	10600559	intron	Trim9 +	chr2L_13_10595001	chr2L_10595001	OreR-AS-FC
330	chr2L	10862825	10862873	chr2L	10864464	10864512	Rt1c	24	1639	7.0	18.5	12.8	1.7	1687	chr2L	10862825	3` UTR	CR43807 -	chr2L	10863668	intron	CR43807 -	chr2L	10864512	3` UTR	CR43807 -	chr2L_24_10860001	chr2L_10860001	OreR-AS-FC
335	chr2L	10946925	10946972	chr2L	10956165	10956212	roo	28	9240	20.5	15.0	17.8	1.5	9287	chr2L	10946925	intron	dpr2 -	chr2L	10951568	intron	dpr2 -	chr2L	10956212	intron	dpr2 -	chr2L_28_10950001	chr2L_10950001	OreR-AS-FC
346	chr2L	11315245	11315268	chr2L	11317674	11317697	G2	7	2429	9.0	5.5	7.2	0.9	2452	chr2L	11315245	intergenic	not near genes	chr2L	11316471	intergenic	not near genes	chr2L	11317697	intergenic	not near genes	chr2L_7_11315001	chr2L_11315001	OreR-AS-FC
357	chr2L	11540569	11540600	chr2L	11547996	11548027	Tabor	6	7427	1.0	3.0	2.0	2.0	7458	chr2L	11540569	intergenic	not near genes	chr2L	11544298	intergenic	not near genes	chr2L	11548027	intergenic	not near genes	chr2L_6_11540001	chr2L_11540001	OreR-AS-FC
360	chr2L	11563621	11563659	chr2L	11568850	11568888	copia	17	5229	8.0	4.5	6.2	2.4	5267	chr2L	11563621	intergenic	not near genes	chr2L	11566254	intergenic	not near genes	chr2L	11568888	intergenic	not near genes	chr2L_17_11565001	chr2L_11565001	OreR-AS-FC
363	chr2L	11614032	11614065	chr2L	11615552	11615585	hopper2	6	1520	4.5	3.0	3.8	1.2	1553	chr2L	11614032	intron	kek2 +	chr2L	11614808	intron	kek2 +	chr2L	11615585	intron	kek2 +	chr2L_6_11610001	chr2L_11610001	OreR-AS-FC
367	chr2L	11713490	11713533	chr2L	11720983	11721026	blood	18	7493	4.5	7.5	6.0	2.6	7536	chr2L	11713490	intergenic	not near genes	chr2L	11717258	intergenic	not near genes	chr2L	11721026	intergenic	CR44143 +	chr2L_18_11715001	chr2L_11715001	OreR-AS-FC
373	chr2L	12067308	12067353	chr2L	12074385	12074430	297	8	7077	2.0	3.0	2.5	2.3	7122	chr2L	12067308	intergenic	not near genes	chr2L	12070869	intergenic	not near genes	chr2L	12074430	intergenic	not near genes	chr2L_8_12070001	chr2L_12070001	OreR-AS-FC
387	chr2L	12558295	12558352	chr2L	12565449	12565506	HMS-Beagle	24	7154	1.0	2.0	1.5	9.6	7211	chr2L	12558295	intergenic	not near genes	chr2L	12561900	intergenic	not near genes	chr2L	12565506	intergenic	not near genes	chr2L_24_12560001	chr2L_12560001	OreR-AS-FC
392	chr2L	12728906	12728949	chr2L	12729171	12729214	pogo	15	265	2.0	15.5	8.8	1.5	308	chr2L	12728906	intron	MRP +	chr2L	12729060	intron	MRP +	chr2L	12729214	exon	MRP +	chr2L_15_12725001	chr2L_12725001	OreR-AS-FC
393	chr2L	12731034	12731088	chr2L	12735826	12735880	F-element	34	4792	8.0	9.5	8.8	3.5	4846	chr2L	12731034	intron	MRP +	chr2L	12733457	intron	MRP +	chr2L	12735880	intron	MRP +	chr2L_34_12730001	chr2L_12730001	OreR-AS-FC
395	chr2L	12739153	12739199	chr2L	12743959	12744005	Doc	26	4806	11.0	12.0	11.5	2.1	4852	chr2L	12739153	exon	MRP +	chr2L	12741579	intron	MRP +	chr2L	12744005	exon	MRP +	chr2L_26_12740001	chr2L_12740001	OreR-AS-FC
400	chr2L	12781777	12781815	chr2L	12789245	12789283	Quasimodo	23	7468	24.0	8.5	16.2	1.3	7506	chr2L	12781777	intergenic	not near genes	chr2L	12785530	intergenic	not near genes	chr2L	12789283	intergenic	not near genes	chr2L_23_12785001	chr2L_12785001	OreR-AS-FC
401	chr2L	12791582	12791595	chr2L	12795282	12795295	F-element	7	3700	3.5	3.0	3.2	1.7	3713	chr2L	12791582	intergenic	not near genes	chr2L	12793438	intergenic	not near genes	chr2L	12795295	intergenic	not near genes	chr2L_7_12790001	chr2L_12790001	OreR-AS-FC
402	chr2L	12861672	12861726	chr2L	12863164	12863218	hobo	30	1492	5.5	8.0	6.8	3.8	1546	chr2L	12861672	intergenic	not near genes	chr2L	12862445	intergenic	not near genes	chr2L	12863218	intergenic	not near genes	chr2L_30_12860001	chr2L_12860001	OreR-AS-FC
403	chr2L	12894005	12894049	chr2L	12895497	12895541	hobo	28	1492	12.0	22.5	17.2	1.5	1536	chr2L	12894005	intergenic	not near genes	chr2L	12894773	intergenic	not near genes	chr2L	12895541	intergenic	not near genes	chr2L_28_12890001	chr2L_12890001	OreR-AS-FC
404	chr2L	12933827	12933882	chr2L	12941319	12941374	blood	31	7492	5.5	11.0	8.2	3.4	7547	chr2L	12933827	intergenic	not near genes	chr2L	12937600	intergenic	not near genes	chr2L	12941374	intergenic	not near genes	chr2L_31_12935001	chr2L_12935001	OreR-AS-FC
412	chr2L	13241940	13241947	chr2L	13244349	13244356	BS	5	2409	33.5	14.5	24.0	0.2	2416	chr2L	13241940	5` UTR	CR45330 +	chr2L	13243148	intron	CR45330 +	chr2L	13244356	5` UTR	CR45330 +	chr2L_5_13240001	chr2L_13240001	OreR-AS-FC
418	chr2L	13405623	13405676	chr2L	13410445	13410498	Doc	85	4822	42.5	24.5	33.5	2.5	4875	chr2L	13405623	exon	CG7110 +	chr2L	13408060	intron	CG7110 +	chr2L	13410498	intron	CG7110 +	chr2L_85_13405001	chr2L_13405001	OreR-AS-FC
419	chr2L	13449442	13449484	chr2L	13456903	13456945	Quasimodo	11	7461	4.0	3.0	3.5	2.4	7503	chr2L	13449442	intron,5` UTR	CG42784 +,Hsp60D -	chr2L	13453194	intron	CG42784 +	chr2L	13456945	intron	CG42784 +	chr2L_11_13450001	chr2L_13450001	OreR-AS-FC
420	chr2L	13481432	13481468	chr2L	13482064	13482100	jockey	22	632	13.0	17.0	15.0	1.4	668	chr2L	13481432	intron	CG42784 +	chr2L	13481766	intron	CG42784 +	chr2L	13482100	intron	CG42784 +	chr2L_22_13480001	chr2L_13480001	OreR-AS-FC
422	chr2L	13522257	13522285	chr2L	13527589	13527617	Transpac	6	5332	5.0	6.5	5.8	0.9	5360	chr2L	13522257	intron	B4 -	chr2L	13524937	intron	B4 -	chr2L	13527617	intron	B4 -	chr2L_6_13520001	chr2L_13520001	OreR-AS-FC
425	chr2L	13560396	13560415	chr2L	13565242	13565261	F-element	8	4846	5.5	6.5	6.0	1.1	4865	chr2L	13560396	intron	kuz +	chr2L	13562828	intron	kuz +	chr2L	13565261	intron	kuz +	chr2L_8_13560001	chr2L_13560001	OreR-AS-FC
428	chr2L	13761779	13761826	chr2L	13762915	13762962	Doc	10	1136	2.0	4.5	3.2	2.4	1183	chr2L	13761779	intron	TM9SF4 +	chr2L	13762370	intron	TM9SF4 +	chr2L	13762962	intron	TM9SF4 +	chr2L_10_13760001	chr2L_13760001	OreR-AS-FC
431	chr2L	13853067	13853085	chr2L	13862242	13862260	roo	5	9175	9.5	3.5	6.5	0.7	9193	chr2L	13853067	intron	CenG1A +	chr2L	13857664	intron	CenG1A +	chr2L	13862260	intron	CenG1A +	chr2L_5_13855001	chr2L_13855001	OreR-AS-FC
432	chr2L	13853087	13853109	chr2L	13862239	13862284	roo	6	9171	7.0	3.5	5.2	1.0	9197	chr2L	13853087	intron	CenG1A +	chr2L	13857686	intron	CenG1A +	chr2L	13862284	intron	CenG1A +	chr2L_6_13855001	chr2L_13855001	OreR-AS-FC
447	chr2L	14465588	14465613	chr2L	14469090	14469115	hopper2	5	3502	2.0	10.0	6.0	0.7	3527	chr2L	14465588	intergenic	not near genes	chr2L	14467352	intergenic	not near genes	chr2L	14469115	intergenic	not near genes	chr2L_5_14465001	chr2L_14465001	OreR-AS-FC
455	chr2L	14642551	14642596	chr2L	14651739	14651784	roo	11	9188	12.0	9.5	10.8	0.9	9233	chr2L	14642551	intron	osp -	chr2L	14647168	intron	osp -	chr2L	14651784	intron	osp -	chr2L_11_14645001	chr2L_14645001	OreR-AS-FC
462	chr2L	14803858	14803909	chr2L	14809086	14809137	copia	8	5228	2.0	4.5	3.2	1.9	5279	chr2L	14803858	intergenic	not near genes	chr2L	14806498	intergenic	not near genes	chr2L	14809137	intergenic	not near genes	chr2L_8_14805001	chr2L_14805001	OreR-AS-FC
464	chr2L	14889932	14889979	chr2L	14890382	14890429	jockey	15	450	6.0	4.5	5.2	2.4	497	chr2L	14889932	intergenic	not near genes	chr2L	14890180	intergenic	not near genes	chr2L	14890429	intergenic	not near genes	chr2L_15_14890001	chr2L_14890001	OreR-AS-FC
467	chr2L	14984361	14984395	chr2L	14991988	14992022	opus	10	7627	7.0	4.5	5.8	1.5	7661	chr2L	14984361	intron	mol -	chr2L	14988192	intron	mol -	chr2L	14992022	intron	mol -	chr2L_10_14985001	chr2L_14985001	OreR-AS-FC
481	chr2L	15446029	15446080	chr2L	15453523	15453574	blood	17	7494	3.5	3.0	3.2	4.0	7545	chr2L	15446029	intergenic	not near genes	chr2L	15449802	intergenic	not near genes	chr2L	15453574	intergenic	not near genes	chr2L_17_15445001	chr2L_15445001	OreR-AS-FC
488	chr2L	15586389	15586439	chr2L	15593466	15593516	297	14	7077	5.5	3.5	4.5	2.5	7127	chr2L	15586389	intergenic	not near genes	chr2L	15589952	intergenic	not near genes	chr2L	15593516	intergenic	not near genes	chr2L_14_15585001	chr2L_15585001	OreR-AS-FC
495	chr2L	15826876	15826892	chr2L	15829295	15829311	Tabor	4	2419	2.0	3.0	2.5	1.1	2435	chr2L	15826876	intergenic	not near genes	chr2L	15828094	intergenic	not near genes	chr2L	15829311	intergenic	not near genes	chr2L_4_15825001	chr2L_15825001	OreR-AS-FC
500	chr2L	15956001	15956043	chr2L	15957493	15957535	hobo	11	1492	11.5	6.5	9.0	1.1	1534	chr2L	15956001	intron	beat-Ib -	chr2L	15956768	intron	beat-Ib -	chr2L	15957535	intron	beat-Ib -	chr2L_11_15955001	chr2L_15955001	OreR-AS-FC
505	chr2L	16071771	16071771	chr2L	16217660	16217661	copia	16	145889	43.0	22.0	32.5	0.5	145890	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217661	intergenic	not near genes	chr2L_16_16140001	chr2L_16140001	OreR-AS-FC
506	chr2L	16153717	16153743	chr2L	16160810	16160836	297	13	7093	14.5	7.5	11.0	1.1	7119	chr2L	16153717	intergenic	not near genes	chr2L	16157276	intergenic	not near genes	chr2L	16160836	intergenic	not near genes	chr2L_13_16155001	chr2L_16155001	OreR-AS-FC
509	chr2L	16071771	16071771	chr2L	16217660	16217660	copia	8	145889	43.0	22.0	32.5	0.2	145889	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217660	intergenic	not near genes	chr2L_8_16140001	chr2L_16140001	OreR-AS-FC
513	chr2L	16280235	16280285	chr2L	16281431	16281481	1360	29	1196	7.5	14.0	10.8	2.5	1246	chr2L	16280235	intron	crp -	chr2L	16280858	intron	crp -	chr2L	16281481	intron	crp -	chr2L_29_16280001	chr2L_16280001	OreR-AS-FC
523	chr2L	16511945	16511980	chr2L	16519084	16519119	HMS-Beagle	5	7139	2.0	1.0	1.5	2.0	7174	chr2L	16511945	intron	CG5953 -	chr2L	16515532	intron	CG5953 -	chr2L	16519119	intron	CG5953 -	chr2L_5_16515001	chr2L_16515001	OreR-AS-FC
535	chr2L	16958085	16958133	chr2L	16962898	16962946	Doc	9	4813	3.0	4.0	3.5	2.0	4861	chr2L	16958085	intergenic	not near genes	chr2L	16960516	intergenic	not near genes	chr2L	16962946	intergenic	not near genes	chr2L_9_16960001	chr2L_16960001	OreR-AS-FC
542	chr2L	17167545	17167595	chr2L	17167811	17167861	pogo	5	266	3.5	1.5	2.5	1.4	316	chr2L	17167545	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167703	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167861	intron,intron	CG34106 +,beat-IIIa +	chr2L_5_17165001	chr2L_17165001	OreR-AS-FC
546	chr2L	17273169	17273221	chr2L	17277977	17278029	F-element	19	4808	4.0	4.5	4.2	3.7	4860	chr2L	17273169	intergenic	not near genes	chr2L	17275599	intergenic	not near genes	chr2L	17278029	intergenic	not near genes	chr2L_19_17275001	chr2L_17275001	OreR-AS-FC
560	chr2L	17687491	17687519	chr2L	17692261	17692289	F-element	10	4770	4.0	3.5	3.8	2.1	4798	chr2L	17687491	intron	CadN -	chr2L	17689890	intron	CadN -	chr2L	17692289	intron	CadN -	chr2L_10_17685001	chr2L_17685001	OreR-AS-FC
562	chr2L	17727843	17727869	chr2L	17729335	17729361	hobo	9	1492	6.0	7.0	6.5	1.2	1518	chr2L	17727843	intron	CadN -	chr2L	17728602	intron	CadN -	chr2L	17729361	intron	CadN -	chr2L_9_17725001	chr2L_17725001	OreR-AS-FC
564	chr2L	17819909	17819947	chr2L	17825137	17825175	copia	7	5228	3.0	4.5	3.8	1.5	5266	chr2L	17819909	intron	CadN2 -	chr2L	17822542	intron	CadN2 -	chr2L	17825175	intron	CadN2 -	chr2L_7_17820001	chr2L_17820001	OreR-AS-FC
565	chr2L	17911937	17911988	chr2L	17914140	17914191	pogo	14	2203	7.5	1.0	4.2	2.7	2254	chr2L	17911937	intergenic	not near genes	chr2L	17913064	intergenic	not near genes	chr2L	17914191	intergenic	CG43271 -	chr2L_14_17910001	chr2L_17910001	OreR-AS-FC
566	chr2L	17951923	17951976	chr2L	17953415	17953468	hobo	27	1492	7.0	10.5	8.8	2.8	1545	chr2L	17951923	intergenic	CR44398 -,CR44397 -	chr2L	17952696	intergenic	not near genes	chr2L	17953468	intergenic	not near genes	chr2L_27_17950001	chr2L_17950001	OreR-AS-FC
571	chr2L	18051852	18051902	chr2L	18061024	18061074	roo	12	9172	6.5	4.5	5.5	1.8	9222	chr2L	18051852	intron	rdo +	chr2L	18056463	intron	rdo +	chr2L	18061074	intron	rdo +	chr2L_12_18055001	chr2L_18055001	OreR-AS-FC
584	chr2L	18408008	18408030	chr2L	18412817	18412839	Doc	7	4809	7.5	0.0	3.8	1.5	4831	chr2L	18408008	intergenic	not near genes	chr2L	18410424	intergenic	not near genes	chr2L	18412839	intergenic	not near genes	chr2L_7_18410001	chr2L_18410001	OreR-AS-FC
605	chr2L	19147344	19147392	chr2L	19154404	19154452	297	14	7060	5.5	4.5	5.0	2.3	7108	chr2L	19147344	intron	brat +	chr2L	19150898	intron	brat +	chr2L	19154452	intron	brat +	chr2L_14_19150001	chr2L_19150001	OreR-AS-FC
612	chr2L	19344993	19345039	chr2L	19357227	19357273	blood	20	12234	3.5	13.0	8.2	2.2	12280	chr2L	19344993	intron	dnt -	chr2L	19351133	intron	dnt -	chr2L	19357273	intron	dnt -	chr2L_20_19350001	chr2L_19350001	OreR-AS-FC
622	chr2L	19620075	19620126	chr2L	19621089	19621140	jockey	34	1014	11.5	8.5	10.0	3.1	1065	chr2L	19620075	intron	Lar +	chr2L	19620608	intron	Lar +	chr2L	19621140	intron	Lar +	chr2L_34_19620001	chr2L_19620001	OreR-AS-FC
624	chr2L	19652544	19652589	chr2L	19674005	19674048	opus	14	21460	8.0	2.0	5.0	2.3	21504	chr2L	19652544	intron	Lar +	chr2L	19663296	intron	Lar +	chr2L	19674048	intron	Lar +	chr2L_14_19660001	chr2L_19660001	OreR-AS-FC
627	chr2L	19703516	19703567	chr2L	19712677	19712728	roo	33	9161	8.0	9.0	8.5	3.5	9212	chr2L	19703516	intron	Lar +	chr2L	19708122	intron	Lar +	chr2L	19712728	intron	Lar +	chr2L_33_19705001	chr2L_19705001	OreR-AS-FC
630	chr2L	19737364	19737378	chr2L	19740858	19740872	1360	5	3494	21.0	19.5	20.2	0.2	3508	chr2L	19737364	intergenic	Nf-YB +	chr2L	19739118	intergenic	not near genes	chr2L	19740872	intergenic	not near genes	chr2L_5_19735001	chr2L_19735001	OreR-AS-FC
631	chr2L	19762782	19762831	chr2L	19763049	19763098	pogo	19	267	15.0	8.0	11.5	1.5	316	chr2L	19762782	exon	fbp -	chr2L	19762940	intron	fbp -	chr2L	19763098	intron	fbp -	chr2L_19_19760001	chr2L_19760001	OreR-AS-FC
640	chr2L	20005850	20005894	chr2L	20010951	20010995	flea	7	5101	3.0	8.0	5.5	1.1	5145	chr2L	20005850	intron	CG43861 -	chr2L	20008422	intron	CG43861 -	chr2L	20010995	intron	CG43861 -	chr2L_7_20005001	chr2L_20005001	OreR-AS-FC
648	chr2L	20303152	20303180	chr2L	20310645	20310673	blood	8	7493	4.0	3.5	3.8	1.7	7521	chr2L	20303152	intergenic	not near genes	chr2L	20306912	intergenic	not near genes	chr2L	20310673	intergenic	not near genes	chr2L_8_20305001	chr2L_20305001	OreR-AS-FC
649	chr2L	20372194	20372224	chr2L	20372469	20372499	pogo	16	275	6.0	13.0	9.5	1.5	305	chr2L	20372194	intergenic	Ugt37a1 -	chr2L	20372346	intergenic	Ugt37a1 -	chr2L	20372499	exon	Ugt37a1 -	chr2L_16_20370001	chr2L_20370001	OreR-AS-FC
656	chr2L	20568637	20568687	chr2L	20569052	20569102	X-element	22	415	4.5	6.0	5.2	3.5	465	chr2L	20568637	intron	CR45347 +	chr2L	20568870	intron	CR45347 +	chr2L	20569102	intron	CR45347 +	chr2L_22_20565001	chr2L_20565001	OreR-AS-FC
658	chr2L	20576192	20576240	chr2L	20583686	20583734	blood	25	7494	4.0	6.0	5.0	4.2	7542	chr2L	20576192	intergenic	CR45347 +	chr2L	20579963	intergenic	not near genes	chr2L	20583734	3` UTR	CR44909 -	chr2L_25_20575001	chr2L_20575001	OreR-AS-FC
661	chr2L	20639476	20639528	chr2L	20639777	20639829	INE-1	15	301	8.5	5.5	7.0	1.9	353	chr2L	20639476	intergenic	not near genes	chr2L	20639652	intergenic	CG31680 +	chr2L	20639829	intergenic	CG31680 +	chr2L_15_20635001	chr2L_20635001	OreR-AS-FC
665	chr2L	20835791	20835822	chr2L	20836533	20836564	Quasimodo	9	742	12.5	5.5	9.0	0.9	773	chr2L	20835791	5` UTR	Oseg5 -	chr2L	20836178	intergenic	Oseg5 -,Spn38F -	chr2L	20836564	intergenic	Spn38F -	chr2L_9_20835001	chr2L_20835001	OreR-AS-FC
666	chr2L	20891509	20891542	chr2L	20896635	20896668	jockey	10	5126	3.5	2.5	3.0	2.5	5159	chr2L	20891509	intron,intron	CG43739 -,sky -	chr2L	20894088	intron,intron	CG43739 -,sky -	chr2L	20896668	intron,intron	CG43739 -,sky -	chr2L_10_20890001	chr2L_20890001	OreR-AS-FC
667	chr2L	20901429	20901478	chr2L	20902618	20902667	1360	10	1189	12.0	9.5	10.8	0.8	1238	chr2L	20901429	intron,intron	CG43739 -,sky -	chr2L	20902048	intron,intron	CG43739 -,sky -	chr2L	20902667	intron,intron	CG43739 -,sky -	chr2L_10_20900001	chr2L_20900001	OreR-AS-FC
670	chr2L	20976630	20976677	chr2L	20981470	20981517	X-element	16	4840	4.0	4.0	4.0	3.2	4887	chr2L	20976630	intron	CG42238 -	chr2L	20979074	intron	CG42238 -	chr2L	20981517	intron	CG42238 -	chr2L_16_20975001	chr2L_20975001	OreR-AS-FC
672	chr2L	21020253	21020306	chr2L	21023955	21024008	NOF	28	3702	8.5	9.5	9.0	2.8	3755	chr2L	21020253	intron	CG42238 -	chr2L	21022130	intron	CG42238 -	chr2L	21024008	intron	CG42238 -	chr2L_28_21020001	chr2L_21020001	OreR-AS-FC
673	chr2L	21041113	21041167	chr2L	21049399	21049430	Tirant	16	8285	3.5	7.5	5.5	2.5	8317	chr2L	21041113	intron	CG42238 -	chr2L	21045272	intron	CG42238 -	chr2L	21049430	intron	CG42238 -	chr2L_16_21045001	chr2L_21045001	OreR-AS-FC
678	chr2L	21347547	21347578	chr2L	21355044	21355074	blood	5	7496	3.0	2.0	2.5	1.4	7527	chr2L	21347547	intron	Tsp39D +	chr2L	21351310	intron	Tsp39D +	chr2L	21355074	intron	Tsp39D +	chr2L_5_21350001	chr2L_21350001	OreR-AS-FC
680	chr2L	21691803	21691825	chr2L	21698298	21698320	Burdock	6	6495	7.0	0.5	3.8	1.2	6517	chr2L	21691803	intron	CG31619 +	chr2L	21695062	intron	CG31619 +	chr2L	21698320	intron	CG31619 +	chr2L_6_21695001	chr2L_21695001	OreR-AS-FC
688	chr2L	21981660	21981712	chr2L	21990850	21990902	roo	32	9190	4.5	7.0	5.8	4.7	9242	chr2L	21981660	exon	CG2528 -	chr2L	21986281	intron	CG2528 -	chr2L	21990902	exon	CG2528 -	chr2L_32_21985001	chr2L_21985001	OreR-AS-FC
690	chr2L	22037360	22037381	chr2L	22037687	22037708	INE-1	4	327	11.0	3.5	7.2	0.5	348	chr2L	22037360	intergenic	CG41434 +	chr2L	22037534	intergenic	CG41434 +	chr2L	22037708	intergenic	CG41434 +	chr2L_4_22035001	chr2L_22035001	OreR-AS-FC
696	chr2L	22258595	22258646	chr2L	22260744	22260795	G6	11	2149	5.5	6.5	6.0	1.6	2200	chr2L	22258595	intergenic	Tif-IA +	chr2L	22259695	intergenic	not near genes	chr2L	22260795	intergenic	not near genes	chr2L_11_22255001	chr2L_22255001	OreR-AS-FC
700	chr2L	22548921	22548941	chr2L	22550171	22550191	1360	6	1250	0.0	9.5	4.8	1.0	1270	chr2L	22548921	intergenic	CG17490 +	chr2L	22549556	intergenic	not near genes	chr2L	22550191	intergenic	CG17493 +	chr2L_6_22545001	chr2L_22545001	OreR-AS-FC
701	chr2L	22581946	22582002	chr2L	22583760	22583816	S-element	12	1814	1.5	4.0	2.8	3.2	1870	chr2L	22581946	intron	CG17494 +	chr2L	22582881	intron	CG17494 +	chr2L	22583816	intron	CG17494 +	chr2L_12_22580001	chr2L_22580001	OreR-AS-FC
705	chr2L	22776396	22776442	chr2L	22778210	22778256	S-element	9	1814	3.0	4.0	3.5	2.0	1860	chr2L	22776396	intergenic	not near genes	chr2L	22777326	intergenic	not near genes	chr2L	22778256	intergenic	not near genes	chr2L_9_22775001	chr2L_22775001	OreR-AS-FC
707	chr2L	23006488	23006531	chr2L	23007189	23007232	Osvaldo	10	701	31.0	44.0	37.5	0.3	744	chr2L	23006488	intron	Cht3 -	chr2L	23006860	intron	Cht3 -	chr2L	23007232	intron	Cht3 -	chr2L_10_23005001	chr2L_23005001	OreR-AS-FC
710	chr2R	529329	529350	chr2R	537979	538000	Max-element	4	8650	0.5	3.0	1.8	1.4	8671	chr2R	529329	intron	CG40378 +	chr2R	533664	intron	CG40378 +	chr2R	538000	intron	CG40378 +	chr2R_4_530001	chr2R_530001	OreR-AS-FC
711	chr2R	552739	552777	chr2R	553982	554020	1360	4	1243	6.0	10.0	8.0	0.4	1281	chr2R	552739	intron	CG40378 +	chr2R	553380	intron	CG40378 +	chr2R	554020	intron	CG40378 +	chr2R_4_550001	chr2R_550001	OreR-AS-FC
712	chr2R	1082366	1082379	chr2R	1087167	1087180	Doc	7	4801	7.5	16.0	11.8	0.5	4814	chr2R	1082366	intron	rl +	chr2R	1084773	intron	rl +	chr2R	1087180	intron	rl +	chr2R_7_1080001	chr2R_1080001	OreR-AS-FC
713	chr2R	1516586	1516603	chr2R	1521339	1521356	1731	4	4753	12.5	21.5	17.0	0.2	4770	chr2R	1516586	exon	Maf1 -	chr2R	1518971	intron	Maf1 -	chr2R	1521356	5` UTR	Maf1 -	chr2R_4_1515001	chr2R_1515001	OreR-AS-FC
714	chr2R	2498960	2499012	chr2R	2508132	2508184	roo	9	9172	4.0	2.0	3.0	2.2	9224	chr2R	2498960	intron	MFS17 -	chr2R	2503572	intron	MFS17 -	chr2R	2508184	intron	MFS17 -	chr2R_9_2500001	chr2R_2500001	OreR-AS-FC
716	chr2R	3144064	3144105	chr2R	3393367	3393408	Doc	5	249303	4.0	7.0	5.5	0.8	249344	chr2R	3144064	intron	CG42596 +	chr2R	3268736	intergenic	not near genes	chr2R	3393408	intergenic	not near genes	chr2R_5_3265001	chr2R_3265001	OreR-AS-FC
721	chr2R	4622928	4622975	chr2R	4624112	4624159	1360	13	1184	9.5	6.0	7.8	1.5	1231	chr2R	4622928	intergenic	CR44101 -	chr2R	4623544	intergenic	not near genes	chr2R	4624159	intergenic	not near genes	chr2R_13_4620001	chr2R_4620001	OreR-AS-FC
722	chr2R	4624625	4624657	chr2R	4626555	4626587	Bica	9	1930	39.5	27.0	33.2	0.3	1962	chr2R	4624625	intergenic	not near genes	chr2R	4625606	intergenic	not near genes	chr2R	4626587	intergenic	not near genes	chr2R_9_4625001	chr2R_4625001	OreR-AS-FC
728	chr2R	4750321	4750367	chr2R	4751503	4751549	1360	8	1182	3.5	2.0	2.8	2.1	1228	chr2R	4750321	intron	conu +	chr2R	4750935	intron	conu +	chr2R	4751549	intron	conu +	chr2R_8_4750001	chr2R_4750001	OreR-AS-FC
733	chr2R	5188682	5188727	chr2R	5189400	5189445	gypsy8	7	718	54.0	22.5	38.2	0.2	763	chr2R	5188682	intron	Nipped-A -	chr2R	5189064	intron	Nipped-A -	chr2R	5189445	intron	Nipped-A -	chr2R_7_5185001	chr2R_5185001	OreR-AS-FC
740	chr2R	5417972	5418013	chr2R	5420629	5420670	Burdock	8	2657	3.5	1.0	2.2	2.5	2698	chr2R	5417972	intron	laccase2 +	chr2R	5419321	intron	laccase2 +	chr2R	5420670	intron	laccase2 +	chr2R_8_5415001	chr2R_5415001	OreR-AS-FC
748	chr2R	5653070	5653099	chr2R	5653263	5653292	INE-1	5	193	10.0	5.0	7.5	0.6	222	chr2R	5653070	intergenic	CG11665 -	chr2R	5653181	intergenic	CG11665 -,CG1344 +	chr2R	5653292	intergenic	CG1344 +,CG11665 -	chr2R_5_5650001	chr2R_5650001	OreR-AS-FC
759	chr2R	5869250	5869302	chr2R	5874351	5874403	flea	21	5101	7.0	7.0	7.0	2.6	5153	chr2R	5869250	intergenic	not near genes	chr2R	5871826	intergenic	not near genes	chr2R	5874403	intergenic	not near genes	chr2R_21_5870001	chr2R_5870001	OreR-AS-FC
762	chr2R	5902136	5902187	chr2R	5909720	5909771	17.6	6	7584	6.0	3.0	4.5	1.1	7635	chr2R	5902136	intron	CG43366 +	chr2R	5905954	intron	CG43366 +	chr2R	5909771	intron	CG43366 +	chr2R_6_5905001	chr2R_5905001	OreR-AS-FC
765	chr2R	6096694	6096743	chr2R	6101917	6101966	BS	37	5223	11.5	16.5	14.0	2.5	5272	chr2R	6096694	intron	EcR -	chr2R	6099330	intron	EcR -	chr2R	6101966	intron	EcR -	chr2R_37_6095001	chr2R_6095001	OreR-AS-FC
768	chr2R	6494511	6494549	chr2R	6499298	6499336	F-element	11	4787	8.0	3.5	5.8	1.6	4825	chr2R	6494511	intergenic	not near genes	chr2R	6496924	intergenic	not near genes	chr2R	6499336	intergenic	not near genes	chr2R_11_6495001	chr2R_6495001	OreR-AS-FC
772	chr2R	6579761	6579799	chr2R	6584872	6584911	flea	10	5111	4.0	6.0	5.0	1.7	5150	chr2R	6579761	intron	jing +	chr2R	6582336	intron	jing +	chr2R	6584911	intron	jing +	chr2R_10_6580001	chr2R_6580001	OreR-AS-FC
777	chr2R	6952147	6952180	chr2R	6959752	6959785	opus	9	7605	8.0	3.0	5.5	1.4	7638	chr2R	6952147	intron,intron,exon	mim -,CheB42c -,ppk25 +	chr2R	6955966	intron,intron	mim -,CheB42c -	chr2R	6959785	intron,intron	mim -,CheB42c -	chr2R_9_6955001	chr2R_6955001	OreR-AS-FC
784	chr2R	7139944	7139951	chr2R	7141461	7141468	hopper2	5	1517	8.0	24.5	16.2	0.3	1524	chr2R	7139944	intergenic	not near genes	chr2R	7140706	intergenic	not near genes	chr2R	7141468	intergenic	not near genes	chr2R_5_7140001	chr2R_7140001	OreR-AS-FC
788	chr2R	7196551	7196591	chr2R	7201351	7201391	F-element	5	4800	2.5	2.0	2.2	1.6	4840	chr2R	7196551	intron	pk +	chr2R	7198971	intron	pk +	chr2R	7201391	intron	pk +	chr2R_5_7195001	chr2R_7195001	OreR-AS-FC
789	chr2R	7209844	7209874	chr2R	7217629	7217660	roo	14	7786	2.5	4.0	3.2	3.3	7816	chr2R	7209844	intron	pk +	chr2R	7213752	intron	pk +	chr2R	7217660	intron	pk +	chr2R_14_7210001	chr2R_7210001	OreR-AS-FC
790	chr2R	7235799	7235847	chr2R	7240916	7240964	jockey	22	5117	5.0	6.5	5.8	3.2	5165	chr2R	7235799	intergenic	not near genes	chr2R	7238382	intergenic	not near genes	chr2R	7240964	intergenic	not near genes	chr2R_22_7235001	chr2R_7235001	OreR-AS-FC
792	chr2R	7262173	7262209	chr2R	7269259	7269295	297	8	7086	9.0	15.5	12.2	0.6	7122	chr2R	7262173	intergenic	not near genes	chr2R	7265734	intergenic	not near genes	chr2R	7269295	intergenic	not near genes	chr2R_8_7265001	chr2R_7265001	OreR-AS-FC
798	chr2R	7434873	7434912	chr2R	7439199	7439238	Juan	6	4326	3.5	8.5	6.0	0.9	4365	chr2R	7434873	intergenic	so +	chr2R	7437056	intergenic	not near genes	chr2R	7439238	intergenic	not near genes	chr2R_6_7435001	chr2R_7435001	OreR-AS-FC
801	chr2R	7608384	7608444	chr2R	7613612	7613671	I-element	10	5228	0.5	0.0	0.2	8.3	5287	chr2R	7608384	intron	CG1358 -	chr2R	7611028	intron	CG1358 -	chr2R	7613671	intron	CG1358 -	chr2R_10_7610001	chr2R_7610001	OreR-AS-FC
813	chr2R	7815646	7815698	chr2R	7822140	7822192	Burdock	20	6494	6.0	8.0	7.0	2.5	6546	chr2R	7815646	intergenic	CG1882 +	chr2R	7818919	intergenic	not near genes	chr2R	7822192	3` UTR	cathD -	chr2R_20_7815001	chr2R_7815001	OreR-AS-FC
815	chr2R	7862240	7862250	chr2R	7867353	7867361	flea	9	5111	31.0	12.5	21.8	0.4	5121	chr2R	7862240	intron	Dgk -	chr2R	7864800	intron	Dgk -	chr2R	7867361	intron	Dgk -	chr2R_9_7860001	chr2R_7860001	OreR-AS-FC
816	chr2R	7869171	7869205	chr2R	7873982	7874016	Doc	13	4811	8.5	7.5	8.0	1.4	4845	chr2R	7869171	intron	Dgk -	chr2R	7871594	intron	Dgk -	chr2R	7874016	intron	Dgk -	chr2R_13_7870001	chr2R_7870001	OreR-AS-FC
828	chr2R	8160909	8160946	chr2R	8161024	8161061	1360	31	115	19.0	23.5	21.2	1.4	152	chr2R	8160909	exon	CG8708 -	chr2R	8160985	intron	CG8708 -	chr2R	8161061	intron	CG8708 -	chr2R_31_8160001	chr2R_8160001	OreR-AS-FC
830	chr2R	8330837	8330888	chr2R	8331348	8331399	roo	25	511	5.5	7.5	6.5	3.3	562	chr2R	8330837	intron	pdm3 +	chr2R	8331118	intron	pdm3 +	chr2R	8331399	intron	pdm3 +	chr2R_25_8330001	chr2R_8330001	OreR-AS-FC
835	chr2R	8398188	8398241	chr2R	8402994	8403047	Doc	57	4806	15.5	13.0	14.2	3.8	4859	chr2R	8398188	intron	CG2121 -	chr2R	8400618	intron	CG2121 -	chr2R	8403047	intron	CG2121 -	chr2R_57_8400001	chr2R_8400001	OreR-AS-FC
844	chr2R	8722738	8722790	chr2R	8723004	8723056	pogo	23	266	5.5	8.0	6.8	2.9	318	chr2R	8722738	intron	CG14767 -	chr2R	8722897	intron	CG14767 -	chr2R	8723056	intron	CG14767 -	chr2R_23_8720001	chr2R_8720001	OreR-AS-FC
847	chr2R	8777901	8777945	chr2R	8784130	8784174	diver	7	6229	2.5	5.5	4.0	1.4	6273	chr2R	8777901	intergenic	not near genes	chr2R	8781038	intergenic	not near genes	chr2R	8784174	intergenic	not near genes	chr2R_7_8780001	chr2R_8780001	OreR-AS-FC
854	chr2R	9151278	9151328	chr2R	9157773	9157823	Burdock	26	6495	10.5	9.0	9.8	2.4	6545	chr2R	9151278	exon	CG30345 +	chr2R	9154550	intergenic	not near genes	chr2R	9157823	intergenic	CG8008 -	chr2R_26_9150001	chr2R_9150001	OreR-AS-FC
855	chr2R	9212672	9212718	chr2R	9213183	9213229	roo	38	511	11.5	25.0	18.2	2.0	557	chr2R	9212672	intergenic	CR45309 +	chr2R	9212950	intergenic	CR45309 +	chr2R	9213229	5` UTR	CR45309 +	chr2R_38_9210001	chr2R_9210001	OreR-AS-FC
861	chr2R	9480064	9480097	chr2R	9490620	9490653	roo	9	10556	4.0	3.0	3.5	2.0	10589	chr2R	9480064	intergenic	not near genes	chr2R	9485358	intergenic	not near genes	chr2R	9490653	intergenic	not near genes	chr2R_9_9485001	chr2R_9485001	OreR-AS-FC
869	chr2R	9726592	9726638	chr2R	9734168	9734214	17.6	7	7576	9.0	4.0	6.5	0.9	7622	chr2R	9726592	intron	sqa -	chr2R	9730403	intron	sqa -	chr2R	9734214	intron	sqa -	chr2R_7_9730001	chr2R_9730001	OreR-AS-FC
870	chr2R	9871028	9871073	chr2R	9871539	9871584	roo	21	511	0.5	10.0	5.2	3.4	556	chr2R	9871028	intron	cbx -	chr2R	9871306	intron	cbx -	chr2R	9871584	intron,5` UTR	cbx -,CG18446 +	chr2R_21_9870001	chr2R_9870001	OreR-AS-FC
872	chr2R	9945421	9945465	chr2R	9945642	9945686	BS	14	221	4.0	9.5	6.8	1.8	265	chr2R	9945421	intron	Mef2 -	chr2R	9945554	intron	Mef2 -	chr2R	9945686	intron	Mef2 -	chr2R_14_9945001	chr2R_9945001	OreR-AS-FC
873	chr2R	10005827	10005879	chr2R	10007017	10007069	1360	26	1190	6.5	12.5	9.5	2.5	1242	chr2R	10005827	intron	Pka-R2 -	chr2R	10006448	intron	Pka-R2 -	chr2R	10007069	intron	Pka-R2 -	chr2R_26_10005001	chr2R_10005001	OreR-AS-FC
880	chr2R	10176860	10176895	chr2R	10186052	10186087	roo	7	9192	4.5	2.5	3.5	1.6	9227	chr2R	10176860	intron	KCNQ -	chr2R	10181474	intron	KCNQ -	chr2R	10186087	intron	KCNQ -	chr2R_7_10180001	chr2R_10180001	OreR-AS-FC
904	chr2R	10585573	10585580	chr2R	10594181	10594188	Tirant	5	8608	14.0	12.0	13.0	0.4	8615	chr2R	10585573	intron	psq +	chr2R	10589880	intron	psq +	chr2R	10594188	intron	psq +	chr2R_5_10585001	chr2R_10585001	OreR-AS-FC
921	chr2R	10948014	10948058	chr2R	10955590	10955634	17.6	38	7576	0.5	7.0	3.8	7.9	7620	chr2R	10948014	intergenic	not near genes	chr2R	10951824	intergenic	not near genes	chr2R	10955634	intergenic	not near genes	chr2R_38_10950001	chr2R_10950001	OreR-AS-FC
923	chr2R	11009807	11009845	chr2R	11019006	11019044	roo	7	9199	2.0	8.5	5.2	1.1	9237	chr2R	11009807	intron	luna -	chr2R	11014426	intron	luna -	chr2R	11019044	intron	luna -	chr2R_7_11010001	chr2R_11010001	OreR-AS-FC
924	chr2R	11019858	11019902	chr2R	11024949	11024993	jockey	16	5091	5.0	8.0	6.5	2.1	5135	chr2R	11019858	intron	luna -	chr2R	11022426	intron	luna -	chr2R	11024993	intron	luna -	chr2R_16_11020001	chr2R_11020001	OreR-AS-FC
932	chr2R	11207796	11207843	chr2R	11208014	11208061	BS	27	218	11.5	10.0	10.8	2.3	265	chr2R	11207796	intron	shn +	chr2R	11207928	intron	shn +	chr2R	11208061	intron	shn +	chr2R_27_11205001	chr2R_11205001	OreR-AS-FC
937	chr2R	11297600	11297642	chr2R	11301946	11301988	flea	24	4346	5.0	6.0	5.5	3.7	4388	chr2R	11297600	intergenic	CG42336 -	chr2R	11299794	intergenic	not near genes	chr2R	11301988	5` UTR	CG7741 +	chr2R_24_11295001	chr2R_11295001	OreR-AS-FC
941	chr2R	11415495	11415550	chr2R	11418669	11418724	opus	23	3174	5.0	6.0	5.5	3.5	3229	chr2R	11415495	intron	Drip -	chr2R	11417110	intron	Drip -	chr2R	11418724	intron	Drip -	chr2R_23_11415001	chr2R_11415001	OreR-AS-FC
942	chr2R	11472626	11472680	chr2R	11473848	11473902	pogo	30	1222	8.5	3.5	6.0	4.3	1276	chr2R	11472626	intergenic	not near genes	chr2R	11473264	intergenic	not near genes	chr2R	11473902	intergenic	not near genes	chr2R_30_11470001	chr2R_11470001	OreR-AS-FC
970	chr2R	12707498	12707548	chr2R	12715889	12715939	roo	20	8391	2.0	4.0	3.0	5.0	8441	chr2R	12707498	intron	CG42663 +	chr2R	12711718	intron	CG42663 +	chr2R	12715939	intron	CG42663 +	chr2R_20_12710001	chr2R_12710001	OreR-AS-FC
971	chr2R	12789270	12789327	chr2R	12797658	12797715	roo	33	8388	3.5	5.0	4.2	6.3	8445	chr2R	12789270	intron,3` UTR	sca +,CR45137 -	chr2R	12793492	intron,intron	sca +,CR45137 -	chr2R	12797715	intron,3` UTR	sca +,CR45137 -	chr2R_33_12790001	chr2R_12790001	OreR-AS-FC
973	chr2R	12819430	12819470	chr2R	12824524	12824564	jockey	12	5094	17.0	27.0	22.0	0.5	5134	chr2R	12819430	intergenic	not near genes	chr2R	12821997	intergenic	not near genes	chr2R	12824564	intergenic	not near genes	chr2R_12_12820001	chr2R_12820001	OreR-AS-FC
979	chr2R	13136820	13136863	chr2R	13141643	13141686	Doc	34	4823	15.0	20.5	17.8	1.8	4866	chr2R	13136820	exon	Cap-G +	chr2R	13139253	intron	Cap-G +	chr2R	13141686	intron	Cap-G +	chr2R_34_13135001	chr2R_13135001	OreR-AS-FC
989	chr2R	13905582	13905629	chr2R	13907589	13907636	Rt1a	33	2007	7.5	17.0	12.2	2.5	2054	chr2R	13905582	intron	shot -	chr2R	13906609	intron	shot -	chr2R	13907636	intron	shot -	chr2R_33_13905001	chr2R_13905001	OreR-AS-FC
1004	chr2R	14467284	14467327	chr2R	14476467	14476510	roo	28	9183	2.0	14.5	8.2	3.0	9226	chr2R	14467284	intergenic	not near genes	chr2R	14471897	intergenic	not near genes	chr2R	14476510	5` UTR	CR44462 +	chr2R_28_14470001	chr2R_14470001	OreR-AS-FC
1005	chr2R	14497364	14497385	chr2R	14498552	14498573	1360	5	1188	2.5	5.5	4.0	1.0	1209	chr2R	14497364	3` UTR	Cpsf160 -	chr2R	14497968	intron	Cpsf160 -	chr2R	14498573	3` UTR	Cpsf160 -	chr2R_5_14495001	chr2R_14495001	OreR-AS-FC
1020	chr2R	14889190	14889212	chr2R	14897823	14897845	Max-element	5	8633	10.0	0.5	5.2	0.8	8655	chr2R	14889190	intergenic	Cyp6a8 -	chr2R	14893518	intergenic	not near genes	chr2R	14897845	intergenic	not near genes	chr2R_5_14890001	chr2R_14890001	OreR-AS-FC
1027	chr2R	15004702	15004752	chr2R	15005056	15005106	jockey	19	354	9.5	6.0	7.8	2.2	404	chr2R	15004702	intergenic	not near genes	chr2R	15004904	intergenic	not near genes	chr2R	15005106	intergenic	not near genes	chr2R_19_15000001	chr2R_15000001	OreR-AS-FC
1030	chr2R	15015433	15015486	chr2R	15022882	15022931	mdg1	13	7447	5.0	6.0	5.5	2.0	7498	chr2R	15015433	intron	hbs +	chr2R	15019182	intron	hbs +	chr2R	15022931	intron	hbs +	chr2R_13_15015001	chr2R_15015001	OreR-AS-FC
1032	chr2R	15084953	15084990	chr2R	15092027	15092064	297	23	7074	15.0	6.0	10.5	2.0	7111	chr2R	15084953	intergenic	not near genes	chr2R	15088508	intergenic	not near genes	chr2R	15092064	5` UTR	CR44457 +	chr2R_23_15085001	chr2R_15085001	OreR-AS-FC
1034	chr2R	15119297	15119349	chr2R	15127803	15127855	Tirant	43	8506	5.5	16.0	10.8	3.6	8558	chr2R	15119297	intron	chn +	chr2R	15123576	intron	chn +	chr2R	15127855	intron	chn +	chr2R_43_15120001	chr2R_15120001	OreR-AS-FC
1057	chr2R	16061699	16061711	chr2R	16064359	16064371	Burdock	7	2660	7.0	5.5	6.2	1.0	2672	chr2R	16061699	intergenic	not near genes	chr2R	16063035	intergenic	not near genes	chr2R	16064371	intergenic	not near genes	chr2R_7_16060001	chr2R_16060001	OreR-AS-FC
1066	chr2R	16539655	16539662	chr2R	16544889	16544896	copia	6	5234	0.0	1.5	0.8	3.3	5241	chr2R	16539655	intergenic	not near genes	chr2R	16542276	intergenic	not near genes	chr2R	16544896	intergenic	not near genes	chr2R_6_16540001	chr2R_16540001	OreR-AS-FC
1076	chr2R	17147220	17147264	chr2R	17152276	17152320	jockey	12	5056	9.0	6.0	7.5	1.4	5100	chr2R	17147220	intergenic	not near genes	chr2R	17149770	intergenic	not near genes	chr2R	17152320	intergenic	not near genes	chr2R_12_17145001	chr2R_17145001	OreR-AS-FC
1079	chr2R	17485896	17485939	chr2R	17490683	17490724	F-element	8	4787	7.5	3.5	5.5	1.2	4828	chr2R	17485896	5` UTR,intron	CG43110 -,NT5E-2 +	chr2R	17488310	intron	NT5E-2 +	chr2R	17490724	intron	NT5E-2 +	chr2R_8_17485001	chr2R_17485001	OreR-AS-FC
1081	chr2R	17784001	17784056	chr2R	17784267	17784322	pogo	49	266	14.0	16.5	15.2	3.0	321	chr2R	17784001	intergenic	mir-31a -	chr2R	17784162	intergenic	mir-31a -	chr2R	17784322	intergenic	mir-31a -	chr2R_49_17780001	chr2R_17780001	OreR-AS-FC
1090	chr2R	18045647	18045697	chr2R	18046024	18046074	jockey	9	377	3.5	1.5	2.5	2.6	427	chr2R	18045647	intergenic	not near genes	chr2R	18045860	intergenic	not near genes	chr2R	18046074	intergenic	CG5767 -	chr2R_9_18045001	chr2R_18045001	OreR-AS-FC
1095	chr2R	18358368	18358415	chr2R	18372605	18372652	roo	16	14237	7.0	4.0	5.5	2.5	14284	chr2R	18358368	intergenic	not near genes	chr2R	18365510	intergenic	not near genes	chr2R	18372652	intergenic	not near genes	chr2R_16_18365001	chr2R_18365001	OreR-AS-FC
1099	chr2R	18487818	18487852	chr2R	18495294	18495346	blood	8	7485	1.0	4.0	2.5	2.3	7528	chr2R	18487818	intron	CG30116 -	chr2R	18491582	intron	CG30116 -	chr2R	18495346	intron	CG30116 -	chr2R_8_18490001	chr2R_18490001	OreR-AS-FC
1102	chr2R	18575772	18575828	chr2R	18581985	18582041	3S18	24	6213	6.0	9.5	7.8	2.7	6269	chr2R	18575772	intron	GEFmeso -	chr2R	18578906	intron	GEFmeso -	chr2R	18582041	intron	GEFmeso -	chr2R_24_18575001	chr2R_18575001	OreR-AS-FC
1103	chr2R	18590842	18590898	chr2R	18600019	18600075	roo	44	9177	9.0	5.5	7.2	5.4	9233	chr2R	18590842	intron	GEFmeso -	chr2R	18595458	intron	GEFmeso -	chr2R	18600075	intron	GEFmeso -	chr2R_44_18595001	chr2R_18595001	OreR-AS-FC
1116	chr2R	19715831	19715857	chr2R	19723325	19723351	blood	23	7494	16.5	12.0	14.2	1.5	7520	chr2R	19715831	intergenic	not near genes	chr2R	19719591	intergenic	not near genes	chr2R	19723351	intergenic	not near genes	chr2R_23_19715001	chr2R_19715001	OreR-AS-FC
1118	chr2R	19776570	19776623	chr2R	19779918	19779971	jockey	23	3348	5.0	3.5	4.2	4.4	3401	chr2R	19776570	intergenic	not near genes	chr2R	19778270	intergenic	not near genes	chr2R	19779971	intergenic	not near genes	chr2R_23_19775001	chr2R_19775001	OreR-AS-FC
1119	chr2R	19914824	19914873	chr2R	19922261	19922310	mdg1	14	7437	4.0	6.0	5.0	2.3	7486	chr2R	19914824	intergenic	not near genes	chr2R	19918567	intergenic	not near genes	chr2R	19922310	intergenic	not near genes	chr2R_14_19915001	chr2R_19915001	OreR-AS-FC
1121	chr2R	19957407	19957459	chr2R	19962634	19962686	copia	17	5227	7.0	6.0	6.5	2.3	5279	chr2R	19957407	intergenic	CG44623 +	chr2R	19960046	intergenic	not near genes	chr2R	19962686	intergenic	not near genes	chr2R_17_19960001	chr2R_19960001	OreR-AS-FC
1123	chr2R	20069209	20069248	chr2R	20071873	20071913	opus	11	2665	0.0	5.5	2.8	2.9	2704	chr2R	20069209	intergenic	not near genes	chr2R	20070561	intergenic	not near genes	chr2R	20071913	intergenic	not near genes	chr2R_11_20070001	chr2R_20070001	OreR-AS-FC
1133	chr2R	20739418	20739473	chr2R	20744211	20744266	F-element	29	4793	12.5	9.5	11.0	2.4	4848	chr2R	20739418	intron	dpr +	chr2R	20741842	intron	dpr +	chr2R	20744266	intron	dpr +	chr2R_29_20740001	chr2R_20740001	OreR-AS-FC
1135	chr2R	20783288	20783330	chr2R	20788085	20788127	F-element	16	4797	7.0	6.5	6.8	2.1	4839	chr2R	20783288	intergenic	not near genes	chr2R	20785708	intergenic	not near genes	chr2R	20788127	intergenic	CG43666 -	chr2R_16_20785001	chr2R_20785001	OreR-AS-FC
1149	chr2R	21151134	21151146	chr2R	21153792	21153804	opus	6	2658	0.0	18.0	9.0	0.6	2670	chr2R	21151134	intron	CG30389 -	chr2R	21152469	intron	CG30389 -	chr2R	21153804	intron	CG30389 -	chr2R_6_21150001	chr2R_21150001	OreR-AS-FC
1166	chr2R	21738261	21738306	chr2R	21747446	21747491	roo	7	9185	3.5	4.0	3.8	1.5	9230	chr2R	21738261	intergenic	not near genes	chr2R	21742876	intergenic	not near genes	chr2R	21747491	intergenic	not near genes	chr2R_7_21740001	chr2R_21740001	OreR-AS-FC
1167	chr2R	21753068	21753114	chr2R	21753578	21753624	roo	10	510	3.0	7.0	5.0	1.7	556	chr2R	21753068	intergenic	not near genes	chr2R	21753346	intergenic	not near genes	chr2R	21753624	intergenic	not near genes	chr2R_10_21750001	chr2R_21750001	OreR-AS-FC
1168	chr2R	21809503	21809541	chr2R	21817768	21817806	roo	12	8265	7.5	9.0	8.2	1.3	8303	chr2R	21809503	intergenic	not near genes	chr2R	21813654	intergenic	not near genes	chr2R	21817806	intergenic	not near genes	chr2R_12_21810001	chr2R_21810001	OreR-AS-FC
1191	chr2R	22349671	22349716	chr2R	22351480	22351525	jockey	27	1809	7.5	4.5	6.0	3.9	1854	chr2R	22349671	intron	Liprin-gamma -	chr2R	22350598	intron	Liprin-gamma -	chr2R	22351525	intron	Liprin-gamma -	chr2R_27_22350001	chr2R_22350001	OreR-AS-FC
1197	chr2R	22525725	22525781	chr2R	22529305	22529361	jockey	30	3580	5.5	14.5	10.0	2.7	3636	chr2R	22525725	intron	px -	chr2R	22527543	intron	px -	chr2R	22529361	intron	px -	chr2R_30_22525001	chr2R_22525001	OreR-AS-FC
1199	chr2R	22580429	22580438	chr2R	22586598	22586607	diver	5	6169	2.5	5.0	3.8	1.0	6178	chr2R	22580429	intron	dnr1 -	chr2R	22583518	intron	dnr1 -	chr2R	22586607	intron	dnr1 -	chr2R_5_22580001	chr2R_22580001	OreR-AS-FC
1205	chr2R	22729434	22729454	chr2R	22729667	22729687	INE-1	26	233	22.5	10.5	16.5	1.5	253	chr2R	22729434	intron	jbug -	chr2R	22729560	intron	jbug -	chr2R	22729687	intron	jbug -	chr2R_26_22725001	chr2R_22725001	OreR-AS-FC
1207	chr2R	22774944	22774993	chr2R	22775388	22775437	jockey	15	444	4.5	4.0	4.2	2.9	493	chr2R	22774944	intron	CG42260 -	chr2R	22775190	intron	CG42260 -	chr2R	22775437	intron	CG42260 -	chr2R_15_22775001	chr2R_22775001	OreR-AS-FC
1209	chr2R	22843026	22843045	chr2R	22845013	22845036	flea	9	1990	7.0	8.0	7.5	1.1	2010	chr2R	22843026	intergenic	CG9826 +	chr2R	22844031	intergenic	not near genes	chr2R	22845036	intergenic	not near genes	chr2R_9_22840001	chr2R_22840001	OreR-AS-FC
1232	chr2R	23529552	23529606	chr2R	23537153	23537207	412	48	7601	16.5	18.0	17.2	2.6	7655	chr2R	23529552	intron	bw -	chr2R	23533380	intron	bw -	chr2R	23537207	exon	bw -	chr2R_48_23530001	chr2R_23530001	OreR-AS-FC
1250	chr2R	23914275	23914332	chr2R	23921924	23921981	412	61	7649	14.0	20.0	17.0	3.4	7706	chr2R	23914275	exon	kcc +	chr2R	23918128	intron	kcc +	chr2R	23921981	exon	kcc +	chr2R_61_23915001	chr2R_23915001	OreR-AS-FC
1256	chr2R	24147041	24147097	chr2R	24154644	24154700	412	34	7603	16.0	11.5	13.8	2.3	7659	chr2R	24147041	intron	Dat +	chr2R	24150870	intron	Dat +	chr2R	24154700	intron	Dat +	chr2R_34_24150001	chr2R_24150001	OreR-AS-FC
1257	chr2R	24177212	24177265	chr2R	24184722	24184775	412	10	7510	3.0	3.0	3.0	2.5	7563	chr2R	24177212	3` UTR	Nop60B +	chr2R	24180994	intron	Nop60B +	chr2R	24184775	3` UTR	Nop60B +	chr2R_10_24180001	chr2R_24180001	OreR-AS-FC
1268	chr2R	24353403	24353429	chr2R	24361790	24361816	roo	11	8387	8.0	11.5	9.8	1.0	8413	chr2R	24353403	intron,intron	bs +,CR44811 -	chr2R	24357610	intron,intron	bs +,CR44811 -	chr2R	24361816	intron,intron	bs +,CR44811 -	chr2R_11_24355001	chr2R_24355001	OreR-AS-FC
1278	chr2R	24647567	24647614	chr2R	24655149	24655196	412	24	7582	11.0	4.0	7.5	2.8	7629	chr2R	24647567	intergenic	not near genes	chr2R	24651382	intergenic	not near genes	chr2R	24655196	intergenic	not near genes	chr2R_24_24650001	chr2R_24650001	OreR-AS-FC
1280	chr2R	24727859	24727915	chr2R	24735392	24735448	mdg1	37	7533	10.5	11.0	10.8	3.1	7589	chr2R	24727859	intron	Mid1 -	chr2R	24731654	intron	Mid1 -	chr2R	24735448	intron	Mid1 -	chr2R_37_24730001	chr2R_24730001	OreR-AS-FC
1281	chr2R	24763585	24763644	chr2R	24765586	24765645	G2	66	2001	22.5	18.0	20.2	3.1	2060	chr2R	24763585	exon	CG3894 +	chr2R	24764615	intron	CG3894 +	chr2R	24765645	exon	CG3894 +	chr2R_66_24760001	chr2R_24760001	OreR-AS-FC
1292	chr2R	25141645	25141682	chr2R	25159360	25159397	roo	5	17715	0.5	7.0	3.8	1.0	17752	chr2R	25141645	intergenic	not near genes	chr2R	25150521	intergenic	not near genes	chr2R	25159397	intergenic	not near genes	chr2R_5_25150001	chr2R_25150001	OreR-AS-FC
1296	chr3L	402663	402718	chr3L	409741	409796	297	82	7078	22.5	13.0	17.8	4.4	7133	chr3L	402663	intergenic	not near genes	chr3L	406230	intergenic	not near genes	chr3L	409796	intergenic	not near genes	chr3L_82_405001	chr3L_405001	OreR-AS-FC
1305	chr3L	789899	789941	chr3L	790409	790451	roo	9	510	6.0	13.5	9.8	0.8	552	chr3L	789899	intergenic	not near genes	chr3L	790175	intergenic	not near genes	chr3L	790451	intergenic	not near genes	chr3L_9_790001	chr3L_790001	OreR-AS-FC
1306	chr3L	857972	858018	chr3L	866478	866524	Tirant	46	8506	12.0	17.0	14.5	3.0	8552	chr3L	857972	intergenic	not near genes	chr3L	862248	intergenic	not near genes	chr3L	866524	5` UTR	CG12502 +	chr3L_46_860001	chr3L_860001	OreR-AS-FC
1310	chr3L	925158	925198	chr3L	932609	932649	mdg1	10	7451	5.0	1.5	3.2	2.4	7491	chr3L	925158	intron	Glut1 +	chr3L	928904	intron	Glut1 +	chr3L	932649	intron	Glut1 +	chr3L_10_925001	chr3L_925001	OreR-AS-FC
1312	chr3L	939751	939797	chr3L	940897	940943	jockey	26	1146	10.0	6.0	8.0	2.9	1192	chr3L	939751	intron	Glut1 +	chr3L	940347	intron	Glut1 +	chr3L	940943	intron	Glut1 +	chr3L_26_940001	chr3L_940001	OreR-AS-FC
1319	chr3L	1047340	1047381	chr3L	1055180	1055218	412	13	7838	6.0	6.5	6.2	1.8	7878	chr3L	1047340	intron	bab1 -	chr3L	1051279	intron	bab1 -	chr3L	1055218	intron	bab1 -	chr3L_13_1050001	chr3L_1050001	OreR-AS-FC
1322	chr3L	1154110	1154161	chr3L	1163285	1163336	roo	18	9175	6.5	6.5	6.5	2.4	9226	chr3L	1154110	intron	bab2 -	chr3L	1158723	intron	bab2 -	chr3L	1163336	intron	bab2 -	chr3L_18_1155001	chr3L_1155001	OreR-AS-FC
1323	chr3L	1219569	1219621	chr3L	1227327	1227379	412	40	7758	9.5	13.5	11.5	3.2	7810	chr3L	1219569	intron	mwh +	chr3L	1223474	intron	mwh +	chr3L	1227379	intron	mwh +	chr3L_40_1220001	chr3L_1220001	OreR-AS-FC
1333	chr3L	1424749	1424771	chr3L	1430024	1430046	Rt1a	19	5273	0.0	19.0	9.5	1.8	5297	chr3L	1424749	intron	Ptp61F -	chr3L	1427398	intron	Ptp61F -	chr3L	1430046	intron	Ptp61F -	chr3L_19_1425001	chr3L_1425001	OreR-AS-FC
1336	chr3L	1485712	1485741	chr3L	1486908	1486937	1360	34	1196	14.5	13.5	14.0	2.3	1225	chr3L	1485712	intron	stet -	chr3L	1486324	intron	stet -	chr3L	1486937	intron	stet -	chr3L_34_1485001	chr3L_1485001	OreR-AS-FC
1338	chr3L	1505976	1506032	chr3L	1513598	1513654	17.6	38	7622	8.5	9.0	8.8	3.9	7678	chr3L	1505976	intron,intron	Psa +,cue -	chr3L	1509815	intron,intron	Psa +,cue -	chr3L	1513654	intron,intron	Psa +,cue -	chr3L_38_1505001	chr3L_1505001	OreR-AS-FC
1342	chr3L	1740849	1740882	chr3L	1741117	1741150	pogo	7	268	4.0	5.5	4.8	1.2	301	chr3L	1740849	intron	Gk +	chr3L	1741000	intron	Gk +	chr3L	1741150	intron	Gk +	chr3L_7_1740001	chr3L_1740001	OreR-AS-FC
1350	chr3L	2108229	2108273	chr3L	2113458	2113502	copia	6	5229	4.0	3.5	3.8	1.2	5273	chr3L	2108229	intron	sls -	chr3L	2110866	intron	sls -	chr3L	2113502	intron	sls -	chr3L_6_2110001	chr3L_2110001	OreR-AS-FC
1361	chr3L	2447481	2447531	chr3L	2456662	2456712	roo	33	9181	6.0	9.5	7.8	3.7	9231	chr3L	2447481	intron	CG45186 +	chr3L	2452096	intron	CG45186 +	chr3L	2456712	intron	CG45186 +	chr3L_33_2450001	chr3L_2450001	OreR-AS-FC
1368	chr3L	2751440	2751457	chr3L	2755760	2755777	F-element	7	4320	9.0	8.5	8.8	0.7	4337	chr3L	2751440	intron	Mrtf -	chr3L	2753608	intron	Mrtf -	chr3L	2755777	intron	Mrtf -	chr3L_7_2750001	chr3L_2750001	OreR-AS-FC
1372	chr3L	2927816	2927863	chr3L	2936118	2936165	Tirant	4	8302	2.0	1.5	1.8	1.4	8349	chr3L	2927816	intron	Shab +	chr3L	2931990	intron	Shab +	chr3L	2936165	intron	Shab +	chr3L_4_2930001	chr3L_2930001	OreR-AS-FC
1374	chr3L	3051718	3051745	chr3L	3051985	3052012	pogo	10	267	18.5	11.0	14.8	0.6	294	chr3L	3051718	3` UTR	CG32485 +	chr3L	3051865	intergenic	CG32485 +	chr3L	3052012	intergenic	CG32485 +	chr3L_10_3050001	chr3L_3050001	OreR-AS-FC
1376	chr3L	3061260	3061315	chr3L	3069868	3069923	Tirant	36	8608	8.0	8.5	8.2	3.9	8663	chr3L	3061260	intron	CG32486 -	chr3L	3065592	intron	CG32486 -	chr3L	3069923	intron	CG32486 -	chr3L_36_3065001	chr3L_3065001	OreR-AS-FC
1382	chr3L	3281412	3281469	chr3L	3281932	3281990	Doc	32	521	5.0	8.5	6.8	4.1	578	chr3L	3281412	intron	CG12017 +	chr3L	3281701	intron	CG12017 +	chr3L	3281990	intron	CG12017 +	chr3L_32_3280001	chr3L_3280001	OreR-AS-FC
1389	chr3L	3475054	3475094	chr3L	3475523	3475563	jockey	22	469	5.5	10.0	7.8	2.5	509	chr3L	3475054	intron	CG42324 +	chr3L	3475308	intron	CG42324 +	chr3L	3475563	intron	CG42324 +	chr3L_22_3475001	chr3L_3475001	OreR-AS-FC
1393	chr3L	3601287	3601330	chr3L	3606623	3606666	copia	8	5336	7.5	7.0	7.2	1.0	5379	chr3L	3601287	intron	Eip63E +	chr3L	3603976	intron	Eip63E +	chr3L	3606666	intron	Eip63E +	chr3L_8_3600001	chr3L_3600001	OreR-AS-FC
1400	chr3L	3833712	3833770	chr3L	3833978	3834036	pogo	8	266	4.5	1.0	2.8	2.1	324	chr3L	3833712	intron	enc +	chr3L	3833874	intron	enc +	chr3L	3834036	intron	enc +	chr3L_8_3830001	chr3L_3830001	OreR-AS-FC
1433	chr3L	4901103	4901156	chr3L	4907318	4907371	diver	7	6215	7.0	5.0	6.0	1.0	6268	chr3L	4901103	intergenic	CG13704 +	chr3L	4904237	intergenic	not near genes	chr3L	4907371	intergenic	not near genes	chr3L_7_4900001	chr3L_4900001	OreR-AS-FC
1437	chr3L	5034133	5034173	chr3L	5043310	5043350	roo	14	9177	9.5	0.5	5.0	2.3	9217	chr3L	5034133	intron	Con -	chr3L	5038742	intron	Con -	chr3L	5043350	intron	Con -	chr3L_14_5035001	chr3L_5035001	OreR-AS-FC
1438	chr3L	5045433	5045475	chr3L	5050239	5050281	Doc	13	4806	6.5	5.0	5.8	1.9	4848	chr3L	5045433	intron	Con -	chr3L	5047857	intron	Con -	chr3L	5050281	intron	Con -	chr3L_13_5045001	chr3L_5045001	OreR-AS-FC
1447	chr3L	5299129	5299179	chr3L	5306590	5306640	Quasimodo	15	7461	3.0	1.5	2.2	4.7	7511	chr3L	5299129	intergenic	not near genes	chr3L	5302884	intergenic	not near genes	chr3L	5306640	intergenic	not near genes	chr3L_15_5300001	chr3L_5300001	OreR-AS-FC
1456	chr3L	5537710	5537729	chr3L	5538077	5538096	jockey	5	367	4.5	2.0	3.2	1.2	386	chr3L	5537710	intergenic	not near genes	chr3L	5537903	intergenic	not near genes	chr3L	5538096	intergenic	CG10625 -	chr3L_5_5535001	chr3L_5535001	OreR-AS-FC
1463	chr3L	5910009	5910055	chr3L	5910275	5910321	pogo	14	266	7.5	6.0	6.8	1.8	312	chr3L	5910009	intron	CG13288 +	chr3L	5910165	intron	CG13288 +	chr3L	5910321	intron	CG13288 +	chr3L_14_5910001	chr3L_5910001	OreR-AS-FC
1464	chr3L	5926294	5926342	chr3L	5926509	5926557	BS	28	215	8.5	15.0	11.8	2.2	263	chr3L	5926294	intron	Vap-33B +	chr3L	5926426	intron	Vap-33B +	chr3L	5926557	intron	Vap-33B +	chr3L_28_5925001	chr3L_5925001	OreR-AS-FC
1467	chr3L	6001667	6001710	chr3L	6004392	6004435	jockey	7	2725	7.0	1.0	4.0	1.4	2768	chr3L	6001667	intron	PVRAP +	chr3L	6003051	intron	PVRAP +	chr3L	6004435	intron	PVRAP +	chr3L_7_6000001	chr3L_6000001	OreR-AS-FC
1472	chr3L	6220889	6220937	chr3L	6230066	6230114	roo	26	9177	13.5	6.0	9.8	2.4	9225	chr3L	6220889	5` UTR	pncr008:3L +	chr3L	6225502	intergenic	not near genes	chr3L	6230114	intergenic	not near genes	chr3L_26_6225001	chr3L_6225001	OreR-AS-FC
1478	chr3L	6334983	6335031	chr3L	6335479	6335527	297	22	496	7.5	5.0	6.2	3.1	544	chr3L	6334983	intron	CG13300 -	chr3L	6335255	intron	CG13300 -	chr3L	6335527	intron	CG13300 -	chr3L_22_6335001	chr3L_6335001	OreR-AS-FC
1479	chr3L	6405640	6405687	chr3L	6432129	6432176	roo	11	26489	4.0	4.5	4.2	2.1	26536	chr3L	6405640	intron	CG42747 +	chr3L	6418908	intron	CG42747 +	chr3L	6432176	intron	CG42747 +	chr3L_11_6415001	chr3L_6415001	OreR-AS-FC
1483	chr3L	6620587	6620604	chr3L	6621052	6621069	Rt1c	13	465	5.5	19.5	12.5	1.0	482	chr3L	6620587	intergenic	not near genes	chr3L	6620828	intergenic	not near genes	chr3L	6621069	intergenic	not near genes	chr3L_13_6620001	chr3L_6620001	OreR-AS-FC
1490	chr3L	6781108	6781152	chr3L	6783146	6783187	Doc	9	2037	3.0	0.0	1.5	3.6	2079	chr3L	6781108	intergenic	not near genes	chr3L	6782148	intergenic	not near genes	chr3L	6783187	intergenic	not near genes	chr3L_9_6780001	chr3L_6780001	OreR-AS-FC
1493	chr3L	6855906	6855949	chr3L	6860715	6860758	Doc	15	4809	4.0	7.5	5.8	2.2	4852	chr3L	6855906	intergenic	not near genes	chr3L	6858332	intergenic	not near genes	chr3L	6860758	intergenic	not near genes	chr3L_15_6855001	chr3L_6855001	OreR-AS-FC
1495	chr3L	6887498	6887537	chr3L	6895015	6895054	roo	19	7517	7.5	3.0	5.2	3.1	7556	chr3L	6887498	intergenic	not near genes	chr3L	6891276	intergenic	not near genes	chr3L	6895054	intergenic	not near genes	chr3L_19_6890001	chr3L_6890001	OreR-AS-FC
1513	chr3L	7377293	7377347	chr3L	7380423	7380477	297	31	3130	1.5	9.0	5.2	5.0	3184	chr3L	7377293	intron	SMSr -	chr3L	7378885	intron	SMSr -	chr3L	7380477	intron	SMSr -	chr3L_31_7375001	chr3L_7375001	OreR-AS-FC
1515	chr3L	7498738	7498774	chr3L	7503541	7503576	F-element	11	4803	8.5	5.0	6.8	1.4	4838	chr3L	7498738	5` UTR	CG8539 -	chr3L	7501157	intergenic	not near genes	chr3L	7503576	intergenic	not near genes	chr3L_11_7500001	chr3L_7500001	OreR-AS-FC
1523	chr3L	7793692	7793734	chr3L	7800769	7800811	297	19	7077	5.0	7.0	6.0	2.7	7119	chr3L	7793692	intron	CG32369 -	chr3L	7797252	intron	CG32369 -	chr3L	7800811	intron	CG32369 -	chr3L_19_7795001	chr3L_7795001	OreR-AS-FC
1529	chr3L	7886489	7886539	chr3L	7889032	7889082	Stalker4	13	2543	4.5	4.0	4.2	2.5	2593	chr3L	7886489	intron	CG32365 +	chr3L	7887786	intron	CG32365 +	chr3L	7889082	intron	CG32365 +	chr3L_13_7885001	chr3L_7885001	OreR-AS-FC
1530	chr3L	7916806	7916856	chr3L	7926002	7926052	roo	5	9196	4.5	1.5	3.0	1.2	9246	chr3L	7916806	3` UTR	syd -	chr3L	7921429	intron	syd -	chr3L	7926052	3` UTR	syd -	chr3L_5_7920001	chr3L_7920001	OreR-AS-FC
1535	chr3L	7985352	7985395	chr3L	7987708	7987749	NOF	5	2354	4.5	7.0	5.8	0.7	2397	chr3L	7985352	intron	nmo +	chr3L	7986550	intron	nmo +	chr3L	7987749	intron	nmo +	chr3L_5_7985001	chr3L_7985001	OreR-AS-FC
1536	chr3L	8019686	8019735	chr3L	8024124	8024173	NOF	6	4438	2.0	1.5	1.8	2.1	4487	chr3L	8019686	intron	nmo +	chr3L	8021930	intron	nmo +	chr3L	8024173	intron	nmo +	chr3L_6_8020001	chr3L_8020001	OreR-AS-FC
1540	chr3L	8233564	8233591	chr3L	8238853	8238880	Rt1a	19	5287	5.5	21.0	13.2	1.3	5316	chr3L	8233564	intron	CG7213 -	chr3L	8236222	intron	CG7213 -	chr3L	8238880	intron,intron	CG7213 -,Dscam4 +	chr3L_19_8235001	chr3L_8235001	OreR-AS-FC
1542	chr3L	8481755	8481801	chr3L	8490939	8490985	roo	17	9184	11.5	9.0	10.2	1.5	9230	chr3L	8481755	intron	CG43163 -	chr3L	8486370	intron	CG43163 -	chr3L	8490985	intron	CG43163 -	chr3L_17_8485001	chr3L_8485001	OreR-AS-FC
1548	chr3L	8791253	8791295	chr3L	8796698	8796740	I-element	21	5445	17.5	12.5	15.0	1.3	5487	chr3L	8791253	exon	Fhos +	chr3L	8793996	intron	Fhos +	chr3L	8796740	intron	Fhos +	chr3L_21_8790001	chr3L_8790001	OreR-AS-FC
1555	chr3L	9076901	9076949	chr3L	9084486	9084534	412	32	7585	11.5	10.0	10.8	2.7	7633	chr3L	9076901	exon	Tequila +	chr3L	9080718	intron	Tequila +	chr3L	9084534	exon	Tequila +	chr3L_32_9080001	chr3L_9080001	OreR-AS-FC
1558	chr3L	9130533	9130578	chr3L	9134319	9134364	412	17	3786	8.0	9.5	8.8	1.7	3831	chr3L	9130533	intergenic	bol -	chr3L	9132448	intergenic	not near genes	chr3L	9134364	intergenic	Dhpr +	chr3L_17_9130001	chr3L_9130001	OreR-AS-FC
1560	chr3L	9164672	9164708	chr3L	9166164	9166200	hobo	15	1492	5.0	0.0	2.5	4.3	1528	chr3L	9164672	intron	Rdl -	chr3L	9165436	intron	Rdl -	chr3L	9166200	intron	Rdl -	chr3L_15_9165001	chr3L_9165001	OreR-AS-FC
1561	chr3L	9219224	9219268	chr3L	9219921	9219965	jockey	41	697	16.5	16.0	16.2	2.4	741	chr3L	9219224	intergenic	not near genes	chr3L	9219594	intergenic	not near genes	chr3L	9219965	intergenic	not near genes	chr3L_41_9215001	chr3L_9215001	OreR-AS-FC
1564	chr3L	9270594	9270648	chr3L	9278374	9278428	roo	14	7780	7.0	3.5	5.2	2.3	7834	chr3L	9270594	intron	GluRIB +	chr3L	9274511	intron	GluRIB +	chr3L	9278428	exon	GluRIB +	chr3L_14_9270001	chr3L_9270001	OreR-AS-FC
1565	chr3L	9392444	9392451	chr3L	9395290	9395297	Doc	10	2846	20.0	6.5	13.2	0.7	2853	chr3L	9392444	intron	CG4080 -	chr3L	9393870	intron	CG4080 -	chr3L	9395297	intron	CG4080 -	chr3L_10_9390001	chr3L_9390001	OreR-AS-FC
1568	chr3L	9501677	9501728	chr3L	9502188	9502239	roo	17	511	3.5	6.0	4.8	2.9	562	chr3L	9501677	intron	path -	chr3L	9501958	intron	path -	chr3L	9502239	intron	path -	chr3L_17_9500001	chr3L_9500001	OreR-AS-FC
1571	chr3L	9533732	9533786	chr3L	9541317	9541371	412	23	7585	6.5	9.5	8.0	2.6	7639	chr3L	9533732	intergenic	not near genes	chr3L	9537552	intergenic	not near genes	chr3L	9541371	intergenic	not near genes	chr3L_23_9535001	chr3L_9535001	OreR-AS-FC
1574	chr3L	9571883	9571921	chr3L	9572256	9572294	jockey	10	373	5.5	5.5	5.5	1.5	411	chr3L	9571883	intron	CG42673 +	chr3L	9572088	intron	CG42673 +	chr3L	9572294	intron	CG42673 +	chr3L_10_9570001	chr3L_9570001	OreR-AS-FC
1575	chr3L	9575883	9575937	chr3L	9580988	9581042	jockey	13	5105	10.0	5.0	7.5	1.5	5159	chr3L	9575883	intron	CG42673 +	chr3L	9578462	intron	CG42673 +	chr3L	9581042	intron	CG42673 +	chr3L_13_9575001	chr3L_9575001	OreR-AS-FC
1585	chr3L	9929645	9929695	chr3L	9938452	9938501	roo	8	8804	2.5	2.0	2.2	2.5	8856	chr3L	9929645	intron	CG34356 +	chr3L	9934073	intron	CG34356 +	chr3L	9938501	intron	CG34356 +	chr3L_8_9930001	chr3L_9930001	OreR-AS-FC
1589	chr3L	10060088	10060112	chr3L	10067692	10067715	17.6	8	7604	11.5	1.0	6.2	1.1	7627	chr3L	10060088	intron	dpr6 +	chr3L	10063902	intron	dpr6 +	chr3L	10067715	intron	dpr6 +	chr3L_8_10060001	chr3L_10060001	OreR-AS-FC
1604	chr3L	10414927	10414969	chr3L	10417324	10417366	Doc	20	2397	4.5	7.0	5.8	2.9	2439	chr3L	10414927	intergenic	CG12362 +	chr3L	10416146	intergenic	not near genes	chr3L	10417366	intergenic	not near genes	chr3L_20_10415001	chr3L_10415001	OreR-AS-FC
1626	chr3L	11087015	11087081	chr3L	11088846	11088895	S-element	10	1819	1.5	5.5	3.5	2.2	1880	chr3L	11087015	intron	JIL-1 -	chr3L	11087955	intron	JIL-1 -	chr3L	11088895	intron	JIL-1 -	chr3L_10_11085001	chr3L_11085001	OreR-AS-FC
1628	chr3L	11105286	11105323	chr3L	11107022	11107059	X-element	11	1736	14.0	20.5	17.2	0.6	1773	chr3L	11105286	intergenic	not near genes	chr3L	11106172	intergenic	not near genes	chr3L	11107059	exon	CG32073 -	chr3L_11_11105001	chr3L_11105001	OreR-AS-FC
1632	chr3L	11264445	11264493	chr3L	11271424	11271470	17.6	27	6977	15.5	10.5	13.0	1.9	7025	chr3L	11264445	intergenic	not near genes	chr3L	11267958	intergenic	not near genes	chr3L	11271470	intergenic	not near genes	chr3L_27_11265001	chr3L_11265001	OreR-AS-FC
1633	chr3L	11277427	11277479	chr3L	11278453	11278499	Rt1a	29	1020	12.0	51.0	31.5	0.9	1072	chr3L	11277427	intergenic	not near genes	chr3L	11277963	intergenic	not near genes	chr3L	11278499	intergenic	not near genes	chr3L_29_11275001	chr3L_11275001	OreR-AS-FC
1638	chr3L	11329672	11329725	chr3L	11332902	11332955	jockey	26	3230	2.5	6.5	4.5	4.7	3283	chr3L	11329672	intergenic	not near genes	chr3L	11331314	intergenic	not near genes	chr3L	11332955	intergenic	not near genes	chr3L_26_11330001	chr3L_11330001	OreR-AS-FC
1647	chr3L	11564758	11564804	chr3L	11572408	11572454	412	11	7650	18.0	19.0	18.5	0.6	7696	chr3L	11564758	exon	CG33267 +	chr3L	11568606	intron	CG33267 +	chr3L	11572454	exon	CG33267 +	chr3L_11_11565001	chr3L_11565001	OreR-AS-FC
1653	chr3L	11723065	11723109	chr3L	11727885	11727929	Doc	13	4820	7.5	4.0	5.8	1.9	4864	chr3L	11723065	3` UTR	Bmcp +	chr3L	11725497	intron	Bmcp +	chr3L	11727929	3` UTR	Bmcp +	chr3L_13_11725001	chr3L_11725001	OreR-AS-FC
1659	chr3L	11864532	11864581	chr3L	11865852	11865901	pogo	6	1320	15.5	19.5	17.5	0.3	1369	chr3L	11864532	intron	CG44837 -	chr3L	11865216	intron	CG44837 -	chr3L	11865901	intron	CG44837 -	chr3L_6_11865001	chr3L_11865001	OreR-AS-FC
1701	chr3L	12874909	12874949	chr3L	12877226	12877266	jockey	7	2317	3.5	4.0	3.8	1.5	2357	chr3L	12874909	intergenic	not near genes	chr3L	12876088	intergenic	not near genes	chr3L	12877266	intergenic	not near genes	chr3L_7_12875001	chr3L_12875001	OreR-AS-FC
1703	chr3L	12919251	12919256	chr3L	12924760	12924765	Rt1c	4	5509	22.0	12.5	17.2	0.2	5514	chr3L	12919251	intergenic	not near genes	chr3L	12922008	intergenic	not near genes	chr3L	12924765	intergenic	not near genes	chr3L_4_12920001	chr3L_12920001	OreR-AS-FC
1704	chr3L	12919257	12919280	chr3L	12924755	12924778	Rt1c	16	5500	17.0	10.5	13.8	1.1	5521	chr3L	12919257	intergenic	not near genes	chr3L	12922018	intergenic	not near genes	chr3L	12924778	intergenic	not near genes	chr3L_16_12920001	chr3L_12920001	OreR-AS-FC
1706	chr3L	12957765	12957809	chr3L	12962272	12962316	copia	9	4507	3.5	6.0	4.8	1.6	4551	chr3L	12957765	intergenic	not near genes	chr3L	12960040	intergenic	not near genes	chr3L	12962316	intergenic	not near genes	chr3L_9_12960001	chr3L_12960001	OreR-AS-FC
1716	chr3L	13525135	13525187	chr3L	13532956	13533008	roo	17	7821	4.5	9.0	6.8	2.2	7873	chr3L	13525135	intergenic	not near genes	chr3L	13529072	intergenic	not near genes	chr3L	13533008	intergenic	not near genes	chr3L_17_13525001	chr3L_13525001	OreR-AS-FC
1718	chr3L	13574605	13574620	chr3L	13580141	13580156	Rt1c	13	5536	24.5	12.5	18.5	0.7	5551	chr3L	13574605	intron	bru-3 -	chr3L	13577380	intron	bru-3 -	chr3L	13580156	intron	bru-3 -	chr3L_13_13575001	chr3L_13575001	OreR-AS-FC
1725	chr3L	13804521	13804569	chr3L	13822832	13822880	roo	13	18311	2.0	2.0	2.0	4.3	18359	chr3L	13804521	intergenic	not near genes	chr3L	13813700	intergenic	not near genes	chr3L	13822880	intergenic	not near genes	chr3L_13_13810001	chr3L_13810001	OreR-AS-FC
1733	chr3L	14245564	14245577	chr3L	14245683	14245696	1360	4	119	39.0	24.5	31.8	0.1	132	chr3L	14245564	3` UTR	CR44561 -	chr3L	14245630	3` UTR	CR44561 -	chr3L	14245696	intergenic	CR44561 -,CR44560 +	chr3L_4_14245001	chr3L_14245001	OreR-AS-FC
1734	chr3L	14267350	14267391	chr3L	14271815	14271856	F-element	9	4465	4.0	2.0	3.0	2.2	4506	chr3L	14267350	intergenic	not near genes	chr3L	14269603	intergenic	not near genes	chr3L	14271856	intergenic	not near genes	chr3L_9_14265001	chr3L_14265001	OreR-AS-FC
1736	chr3L	14295958	14296011	chr3L	14296469	14296522	roo	45	511	15.0	11.0	13.0	3.2	564	chr3L	14295958	intron	fz +	chr3L	14296240	intron	fz +	chr3L	14296522	intron	fz +	chr3L_45_14295001	chr3L_14295001	OreR-AS-FC
1737	chr3L	14311999	14312052	chr3L	14316838	14316891	X-element	26	4839	7.0	7.5	7.2	3.2	4892	chr3L	14311999	exon	fz +	chr3L	14314445	intron	fz +	chr3L	14316891	intron	fz +	chr3L_26_14310001	chr3L_14310001	OreR-AS-FC
1745	chr3L	14468428	14468476	chr3L	14473659	14473707	copia	9	5231	1.5	5.0	3.2	2.1	5279	chr3L	14468428	intron	bbg -	chr3L	14471068	intron	bbg -	chr3L	14473707	intron	bbg -	chr3L_9_14470001	chr3L_14470001	OreR-AS-FC
1752	chr3L	14721161	14721205	chr3L	14723029	14723073	Rt1c	26	1868	13.5	12.0	12.8	1.9	1912	chr3L	14721161	intron	ome +	chr3L	14722117	intron	ome +	chr3L	14723073	intron	ome +	chr3L_26_14720001	chr3L_14720001	OreR-AS-FC
1753	chr3L	14725547	14725596	chr3L	14728585	14728615	Doc	9	3025	2.0	2.0	2.0	3.0	3068	chr3L	14725547	intron	ome +	chr3L	14727081	intron	ome +	chr3L	14728615	intron	ome +	chr3L_9_14725001	chr3L_14725001	OreR-AS-FC
1756	chr3L	14825136	14825155	chr3L	14832888	14832907	Stalker2	6	7752	0.5	12.5	6.5	0.8	7771	chr3L	14825136	intron	CG17839 +	chr3L	14829022	intron	CG17839 +	chr3L	14832907	intron	CG17839 +	chr3L_6_14825001	chr3L_14825001	OreR-AS-FC
1766	chr3L	14954203	14954398	chr3L	14956045	14956092	transib2	4	1768	3.5	8.0	5.8	0.6	1889	chr3L	14954203	intergenic	not near genes	chr3L	14955148	intergenic	not near genes	chr3L	14956092	intergenic	not near genes	chr3L_4_14955001	chr3L_14955001	OreR-AS-FC
1775	chr3L	15085026	15085075	chr3L	15086217	15086266	1360	15	1191	4.0	6.0	5.0	2.5	1240	chr3L	15085026	intron	cp309 -	chr3L	15085646	intron	cp309 -	chr3L	15086266	intron	cp309 -	chr3L_15_15085001	chr3L_15085001	OreR-AS-FC
1782	chr3L	15295746	15295800	chr3L	15298614	15298668	gypsy5	6	2868	0.5	5.5	3.0	1.5	2922	chr3L	15295746	intergenic	not near genes	chr3L	15297207	intergenic	not near genes	chr3L	15298668	intergenic	Best4 +	chr3L_6_15295001	chr3L_15295001	OreR-AS-FC
1787	chr3L	15423742	15423784	chr3L	15426611	15426653	opus	13	2869	6.0	4.0	5.0	2.2	2911	chr3L	15423742	intergenic	not near genes	chr3L	15425198	intergenic	not near genes	chr3L	15426653	intergenic	not near genes	chr3L_13_15425001	chr3L_15425001	OreR-AS-FC
1803	chr3L	15899205	15899253	chr3L	15899797	15899845	jockey	26	592	11.0	10.0	10.5	2.3	640	chr3L	15899205	intergenic	pHCl -	chr3L	15899525	intergenic	pHCl -	chr3L	15899845	intergenic	sff -	chr3L_26_15895001	chr3L_15895001	OreR-AS-FC
1811	chr3L	16184086	16184135	chr3L	16188930	16188979	X-element	14	4844	2.0	7.5	4.8	2.4	4893	chr3L	16184086	intergenic	not near genes	chr3L	16186532	intergenic	not near genes	chr3L	16188979	intergenic	not near genes	chr3L_14_16185001	chr3L_16185001	OreR-AS-FC
1818	chr3L	16443822	16443877	chr3L	16446188	16446242	Doc	13	2365	3.5	10.0	6.8	1.7	2420	chr3L	16443822	intron,intron	CG33158 +,dsx-c73A -	chr3L	16445032	intron,intron	CG33158 +,dsx-c73A -	chr3L	16446242	intron,intron	CG33158 +,dsx-c73A -	chr3L_13_16445001	chr3L_16445001	OreR-AS-FC
1822	chr3L	16493952	16494011	chr3L	16494494	16494552	jockey	21	542	9.0	7.5	8.2	2.3	600	chr3L	16493952	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494252	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494552	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L_21_16490001	chr3L_16490001	OreR-AS-FC
1830	chr3L	16616492	16616541	chr3L	16621845	16621894	297	26	5353	3.5	4.0	3.8	5.4	5402	chr3L	16616492	3` UTR	Abl -	chr3L	16619193	3` UTR	Abl -	chr3L	16621894	3` UTR	Abl -	chr3L_26_16615001	chr3L_16615001	OreR-AS-FC
1833	chr3L	16684014	16684033	chr3L	16689260	16689279	copia	4	5246	1.0	8.0	4.5	0.7	5265	chr3L	16684014	intron,intron	Lasp -,CG43954 -	chr3L	16686646	intron,intron	Lasp -,CG43954 -	chr3L	16689279	intron,intron,5` UTR	Lasp -,CG43954 -,CR45179 +	chr3L_4_16685001	chr3L_16685001	OreR-AS-FC
1846	chr3L	16945703	16945757	chr3L	16954881	16954935	roo	45	9178	18.0	8.0	13.0	3.2	9232	chr3L	16945703	exon	Obp73a +	chr3L	16950319	intergenic	not near genes	chr3L	16954935	5` UTR	Nc73EF +	chr3L_45_16950001	chr3L_16950001	OreR-AS-FC
1848	chr3L	17084981	17085032	chr3L	17094155	17094206	roo	22	9174	9.0	5.0	7.0	2.8	9225	chr3L	17084981	intron	Rbp6 -	chr3L	17089594	intron	Rbp6 -	chr3L	17094206	intron	Rbp6 -	chr3L_22_17085001	chr3L_17085001	OreR-AS-FC
1858	chr3L	17516954	17517001	chr3L	17524537	17524584	412	12	7583	7.0	6.5	6.8	1.5	7630	chr3L	17516954	intron	CG7564 +	chr3L	17520769	intron	CG7564 +	chr3L	17524584	3` UTR	CG7564 +	chr3L_12_17520001	chr3L_17520001	OreR-AS-FC
1866	chr3L	17730826	17730877	chr3L	17738181	17738232	mdg1	17	7355	2.0	6.0	4.0	3.4	7406	chr3L	17730826	intron	Ccn +	chr3L	17734529	intron	Ccn +	chr3L	17738232	intron	Ccn +	chr3L_17_17730001	chr3L_17730001	OreR-AS-FC
1870	chr3L	17799801	17799833	chr3L	17801613	17801645	S-element	8	1812	1.0	3.0	2.0	2.7	1844	chr3L	17799801	intron	NUCB1 -	chr3L	17800723	intron	NUCB1 -	chr3L	17801645	intron	NUCB1 -	chr3L_8_17800001	chr3L_17800001	OreR-AS-FC
1875	chr3L	17918351	17918401	chr3L	17921179	17921229	opus	10	2828	12.5	4.0	8.2	1.1	2878	chr3L	17918351	intergenic	not near genes	chr3L	17919790	intergenic	not near genes	chr3L	17921229	intergenic	not near genes	chr3L_10_17915001	chr3L_17915001	OreR-AS-FC
1881	chr3L	18047693	18047720	chr3L	18056775	18056802	roo	12	9082	1.0	2.0	1.5	4.8	9109	chr3L	18047693	intron	Eip75B -	chr3L	18052248	intron	Eip75B -	chr3L	18056802	intron	Eip75B -	chr3L_12_18050001	chr3L_18050001	OreR-AS-FC
1894	chr3L	18189564	18189584	chr3L	18190190	18190210	S-element	20	626	16.0	12.5	14.2	1.3	646	chr3L	18189564	intergenic	not near genes	chr3L	18189887	intergenic	not near genes	chr3L	18190210	intergenic	not near genes	chr3L_20_18185001	chr3L_18185001	OreR-AS-FC
1900	chr3L	18514888	18514927	chr3L	18520104	18520143	BS	10	5216	8.0	6.5	7.2	1.2	5255	chr3L	18514888	intergenic	not near genes	chr3L	18517516	intergenic	not near genes	chr3L	18520143	intergenic	not near genes	chr3L_10_18515001	chr3L_18515001	OreR-AS-FC
1901	chr3L	18528616	18528649	chr3L	18537802	18537835	roo	12	9186	4.0	2.5	3.2	2.9	9219	chr3L	18528616	intergenic	not near genes	chr3L	18533226	intergenic	not near genes	chr3L	18537835	intergenic	not near genes	chr3L_12_18530001	chr3L_18530001	OreR-AS-FC
1905	chr3L	18593924	18593977	chr3L	18595929	18595985	Doc	13	2005	4.5	0.5	2.5	3.7	2061	chr3L	18593924	intergenic	term -	chr3L	18594954	intergenic	not near genes	chr3L	18595985	intergenic	CR45389 +	chr3L_13_18590001	chr3L_18590001	OreR-AS-FC
1911	chr3L	18710742	18710786	chr3L	18718719	18718763	Stalker2	5	7977	2.5	7.5	5.0	0.8	8021	chr3L	18710742	intergenic	not near genes	chr3L	18714752	intergenic	not near genes	chr3L	18718763	intergenic	not near genes	chr3L_5_18710001	chr3L_18710001	OreR-AS-FC
1915	chr3L	18772386	18772435	chr3L	18781092	18781141	roo	18	8706	2.5	6.0	4.2	3.5	8755	chr3L	18772386	intron	ftz-f1 -	chr3L	18776764	intron	ftz-f1 -	chr3L	18781141	intron	ftz-f1 -	chr3L_18_18775001	chr3L_18775001	OreR-AS-FC
1920	chr3L	18833761	18833806	chr3L	18834950	18834995	1360	10	1189	5.0	2.5	3.8	2.1	1234	chr3L	18833761	intron	Indy -	chr3L	18834378	intron	Indy -	chr3L	18834995	intron	Indy -	chr3L_10_18830001	chr3L_18830001	OreR-AS-FC
1927	chr3L	19008810	19008869	chr3L	19009176	19009232	jockey	13	365	2.5	4.0	3.2	3.1	422	chr3L	19008810	intron	nkd -	chr3L	19009021	intron	nkd -	chr3L	19009232	intron	nkd -	chr3L_13_19005001	chr3L_19005001	OreR-AS-FC
1933	chr3L	19115626	19115672	chr3L	19115829	19115875	BS	15	203	4.5	12.5	8.5	1.6	249	chr3L	19115626	intron	CG14082 -	chr3L	19115750	intron	CG14082 -	chr3L	19115875	intron	CG14082 -	chr3L_15_19115001	chr3L_19115001	OreR-AS-FC
1934	chr3L	19117022	19117072	chr3L	19124494	19124544	mdg1	25	7472	10.5	6.5	8.5	2.6	7522	chr3L	19117022	intron	CG14082 -	chr3L	19120783	intron	CG14082 -	chr3L	19124544	intron	CG14082 -	chr3L_25_19120001	chr3L_19120001	OreR-AS-FC
1938	chr3L	19208036	19208090	chr3L	19209435	19209489	Doc	21	1399	7.5	3.5	5.5	3.2	1453	chr3L	19208036	intron	fz2 -	chr3L	19208762	intron	fz2 -	chr3L	19209489	intron	fz2 -	chr3L_21_19205001	chr3L_19205001	OreR-AS-FC
1944	chr3L	19398916	19398932	chr3L	19403658	19403674	F-element	12	4742	4.5	6.5	5.5	1.8	4758	chr3L	19398916	intron	CG32206 -	chr3L	19401295	intron	CG32206 -	chr3L	19403674	intron	CG32206 -	chr3L_12_19400001	chr3L_19400001	OreR-AS-FC
1955	chr3L	19820274	19820319	chr3L	19827848	19827893	412	9	7574	2.5	2.5	2.5	2.6	7619	chr3L	19820274	intron	Deaf1 +	chr3L	19824084	intron	Deaf1 +	chr3L	19827893	intron	Deaf1 +	chr3L_9_19820001	chr3L_19820001	OreR-AS-FC
1956	chr3L	19848489	19848524	chr3L	19857704	19857739	roo	7	9215	5.5	5.5	5.5	1.1	9250	chr3L	19848489	intron	Papss +	chr3L	19853114	intron	Papss +	chr3L	19857739	intron	Papss +	chr3L_7_19850001	chr3L_19850001	OreR-AS-FC
1957	chr3L	19861802	19861839	chr3L	19863615	19863652	S-element	10	1813	9.0	2.5	5.8	1.5	1850	chr3L	19861802	5` UTR	CR45433 +	chr3L	19862727	intergenic	not near genes	chr3L	19863652	intergenic	not near genes	chr3L_10_19860001	chr3L_19860001	OreR-AS-FC
1963	chr3L	20113637	20113658	chr3L	20122919	20122940	roo	8	9282	7.5	2.0	4.8	1.4	9303	chr3L	20113637	intergenic	not near genes	chr3L	20118288	intergenic	not near genes	chr3L	20122940	intergenic	not near genes	chr3L_8_20115001	chr3L_20115001	OreR-AS-FC
1967	chr3L	20257310	20257360	chr3L	20258455	20258505	pogo	15	1145	1.5	7.5	4.5	2.7	1195	chr3L	20257310	intron	rdgC +	chr3L	20257908	intron	rdgC +	chr3L	20258505	intron	rdgC +	chr3L_15_20255001	chr3L_20255001	OreR-AS-FC
1972	chr3L	20476732	20476778	chr3L	20484356	20484402	springer	16	7624	4.5	5.5	5.0	2.7	7670	chr3L	20476732	3` UTR	isoQC +	chr3L	20480567	intergenic	not near genes	chr3L	20484402	3` UTR	ZnT77C -	chr3L_16_20480001	chr3L_20480001	OreR-AS-FC
1975	chr3L	20590041	20590093	chr3L	20590605	20590657	412	24	564	8.5	9.0	8.8	2.4	616	chr3L	20590041	intergenic	not near genes	chr3L	20590349	intergenic	not near genes	chr3L	20590657	intergenic	not near genes	chr3L_24_20590001	chr3L_20590001	OreR-AS-FC
1980	chr3L	20821275	20821301	chr3L	20824769	20824795	NOF	7	3575	1.0	2.5	1.8	2.5	3520	chr3L	20821275	intron	Pka-R1 +	chr3L	20823035	intron	Pka-R1 +	chr3L	20824795	intron	Pka-R1 +	chr3L_7_20820001	chr3L_20820001	OreR-AS-FC
1986	chr3L	21014888	21014946	chr3L	21023394	21023452	Tirant	49	8506	12.0	14.0	13.0	3.5	8564	chr3L	21014888	intron	skd -	chr3L	21019170	intron	skd -	chr3L	21023452	intron	skd -	chr3L_49_21015001	chr3L_21015001	OreR-AS-FC
1989	chr3L	21151840	21151897	chr3L	21156949	21157006	flea	26	5109	8.0	5.0	6.5	3.5	5166	chr3L	21151840	intron	Ac78C -	chr3L	21154423	intron	Ac78C -	chr3L	21157006	intron	Ac78C -	chr3L_26_21150001	chr3L_21150001	OreR-AS-FC
1993	chr3L	21243723	21243743	chr3L	21251311	21251331	412	10	7588	12.0	12.5	12.2	0.8	7608	chr3L	21243723	intron	Eip78C +	chr3L	21247527	intron	Eip78C +	chr3L	21251331	intron	Eip78C +	chr3L_10_21245001	chr3L_21245001	OreR-AS-FC
1994	chr3L	21306134	21306163	chr3L	21315318	21315347	roo	9	9184	9.5	2.5	6.0	1.3	9213	chr3L	21306134	3` UTR	CG7632 +	chr3L	21310740	intron	Pc -	chr3L	21315347	3` UTR	Pc -	chr3L_9_21310001	chr3L_21310001	OreR-AS-FC
1996	chr3L	21372698	21372753	chr3L	21379231	21379285	McClintock	9	6533	2.5	4.0	3.2	2.1	6587	chr3L	21372698	intergenic	not near genes	chr3L	21375992	intergenic	not near genes	chr3L	21379285	intergenic	not near genes	chr3L_9_21375001	chr3L_21375001	OreR-AS-FC
2000	chr3L	21498827	21498862	chr3L	21500488	21500523	1360	28	1661	9.0	20.0	14.5	1.8	1696	chr3L	21498827	5` UTR,intron	CR43933 +,Glg1 -	chr3L	21499675	intron	Glg1 -	chr3L	21500523	intron	Glg1 -	chr3L_28_21495001	chr3L_21495001	OreR-AS-FC
2003	chr3L	21749295	21749339	chr3L	21754479	21754524	Doc	13	5184	16.5	7.5	12.0	1.0	5229	chr3L	21749295	intron	Syn1 -	chr3L	21751910	intron	Syn1 -	chr3L	21754524	intron	Syn1 -	chr3L_13_21750001	chr3L_21750001	OreR-AS-FC
2021	chr3L	22099654	22099703	chr3L	22105865	22105914	3S18	19	6211	7.0	3.5	5.2	3.1	6260	chr3L	22099654	intergenic	not near genes	chr3L	22102784	intergenic	not near genes	chr3L	22105914	intergenic	not near genes	chr3L_19_22100001	chr3L_22100001	OreR-AS-FC
2039	chr3L	22555745	22555796	chr3L	22563240	22563291	blood	32	7495	7.0	2.0	4.5	5.8	7546	chr3L	22555745	intergenic	not near genes	chr3L	22559518	intergenic	not near genes	chr3L	22563291	intergenic	not near genes	chr3L_32_22555001	chr3L_22555001	OreR-AS-FC
2041	chr3L	22577595	22577645	chr3L	22582408	22582458	Doc	20	4813	11.5	10.5	11.0	1.7	4863	chr3L	22577595	intergenic	not near genes	chr3L	22580026	intergenic	not near genes	chr3L	22582458	3` UTR	CG14459 -	chr3L_20_22580001	chr3L_22580001	OreR-AS-FC
2042	chr3L	22617163	22617214	chr3L	22624640	22624691	blood	24	7477	8.5	4.5	6.5	3.2	7528	chr3L	22617163	intron	CG14459 -	chr3L	22620927	intron	CG14459 -	chr3L	22624691	intron	CG14459 -	chr3L_24_22620001	chr3L_22620001	OreR-AS-FC
2049	chr3L	22761366	22761415	chr3L	22766825	22766874	Ivk	23	5459	4.5	3.0	3.8	4.8	5508	chr3L	22761366	intron	SPoCk +	chr3L	22764120	intron	SPoCk +	chr3L	22766874	intron	SPoCk +	chr3L_23_22760001	chr3L_22760001	OreR-AS-FC
2052	chr3L	22865963	22866010	chr3L	22867121	22867169	Doc	8	1158	5.5	4.5	5.0	1.3	1206	chr3L	22865963	intron	CG33170 +	chr3L	22866566	intron	CG33170 +	chr3L	22867169	intron	CG33170 +	chr3L_8_22865001	chr3L_22865001	OreR-AS-FC
2060	chr3L	22989839	22989892	chr3L	22996838	22996891	297	21	6999	8.0	5.0	6.5	2.8	7052	chr3L	22989839	intergenic	not near genes	chr3L	22993365	intergenic	not near genes	chr3L	22996891	intergenic	not near genes	chr3L_21_22990001	chr3L_22990001	OreR-AS-FC
2062	chr3L	23165889	23165902	chr3L	23173358	23173371	Quasimodo	7	7469	15.0	1.5	8.2	0.8	7482	chr3L	23165889	intergenic	not near genes	chr3L	23169630	intergenic	not near genes	chr3L	23173371	intergenic	not near genes	chr3L_7_23165001	chr3L_23165001	OreR-AS-FC
2069	chr3L	24168764	24168822	chr3L	24176117	24176175	ZAM	36	7353	5.5	5.0	5.2	5.8	7411	chr3L	24168764	intron	Snap25 +	chr3L	24172470	intron	Snap25 +	chr3L	24176175	intron	Snap25 +	chr3L_36_24170001	chr3L_24170001	OreR-AS-FC
2071	chr3L	24791878	24791903	chr3L	24796682	24796707	Doc	4	4804	4.0	2.5	3.2	1.0	4829	chr3L	24791878	intergenic	not near genes	chr3L	24794292	intergenic	not near genes	chr3L	24796707	intergenic	not near genes	chr3L_4_24790001	chr3L_24790001	OreR-AS-FC
2075	chr3L	23311678	23311683	chr3L	26026738	26026743	G6	5	2715060	55.0	70.5	62.8	0.1	2715065	chr3L	23311678	intergenic	not near genes	chr3L	24669210	intergenic	not near genes	chr3L	26026743	intergenic	not near genes	chr3L_5_24665001	chr3L_24665001	OreR-AS-FC
2079	chr3R	4105022	4105055	chr3R	4110251	4110284	copia	7	5229	4.0	3.0	3.5	1.6	5262	chr3R	4105022	intergenic	not near genes	chr3R	4107653	intergenic	not near genes	chr3R	4110284	intergenic	not near genes	chr3R_7_4105001	chr3R_4105001	OreR-AS-FC
2080	chr3R	4206045	4206090	chr3R	4211645	4211690	mdg3	7	5600	3.0	2.5	2.8	1.8	5645	chr3R	4206045	intron	CG14636 -	chr3R	4208868	intron	CG14636 -	chr3R	4211690	intron	CG14636 -	chr3R_7_4205001	chr3R_4205001	OreR-AS-FC
2081	chr3R	4366740	4366781	chr3R	4375148	4375189	roo	8	8408	2.5	3.0	2.8	2.1	8449	chr3R	4366740	3` UTR	CG1090 +	chr3R	4370964	intergenic	not near genes	chr3R	4375189	5` UTR	CR44922 +	chr3R_8_4370001	chr3R_4370001	OreR-AS-FC
2082	chr3R	4408393	4408436	chr3R	4412722	4412765	Juan	20	4329	8.5	9.5	9.0	2.0	4372	chr3R	4408393	intron	CG32944 -	chr3R	4410579	intron	CG32944 -	chr3R	4412765	intron	CG32944 -	chr3R_20_4410001	chr3R_4410001	OreR-AS-FC
2085	chr3R	4753222	4753263	chr3R	4757550	4757591	F-element	30	4328	16.0	23.5	19.8	1.4	4369	chr3R	4753222	intron,intron	atms +,CG44098 -	chr3R	4755406	intron,intron	atms +,CG44098 -	chr3R	4757591	intron,exon	atms +,CG44098 -	chr3R_30_4755001	chr3R_4755001	OreR-AS-FC
2088	chr3R	4887453	4887511	chr3R	4894855	4894913	rover	13	7402	4.5	8.5	6.5	1.7	7460	chr3R	4887453	intergenic	not near genes	chr3R	4891183	intergenic	not near genes	chr3R	4894913	intergenic	not near genes	chr3R_13_4890001	chr3R_4890001	OreR-AS-FC
2094	chr3R	5045820	5045876	chr3R	5052947	5053003	HMS-Beagle	12	7127	7.5	1.5	4.5	2.2	7183	chr3R	5045820	3` UTR	CR43635 -	chr3R	5049412	intergenic	not near genes	chr3R	5053003	intergenic	CR45588 -	chr3R_12_5045001	chr3R_5045001	OreR-AS-FC
2095	chr3R	5067957	5068005	chr3R	5073499	5073547	mdg3	23	5542	5.5	10.0	7.8	2.6	5590	chr3R	5067957	intergenic	not near genes	chr3R	5070752	intergenic	not near genes	chr3R	5073547	intergenic	not near genes	chr3R_23_5070001	chr3R_5070001	OreR-AS-FC
2100	chr3R	5338369	5338422	chr3R	5343571	5343624	Rt1c	43	5202	13.0	15.5	14.2	2.8	5255	chr3R	5338369	intron	mtd -	chr3R	5340996	intron	mtd -	chr3R	5343624	intron	mtd -	chr3R_43_5340001	chr3R_5340001	OreR-AS-FC
2102	chr3R	5445935	5445986	chr3R	5452420	5452471	Burdock	20	6485	5.5	9.5	7.5	2.4	6536	chr3R	5445935	intron	CG14669 +	chr3R	5449203	intron	CG14669 +	chr3R	5452471	intron	CG14669 +	chr3R_20_5445001	chr3R_5445001	OreR-AS-FC
2109	chr3R	5745990	5746046	chr3R	5746256	5746312	pogo	26	266	8.5	8.5	8.5	2.7	322	chr3R	5745990	3` UTR	Madm +	chr3R	5746151	3` UTR	Madm +	chr3R	5746312	3` UTR	Madm +	chr3R_26_5745001	chr3R_5745001	OreR-AS-FC
2110	chr3R	5746995	5747037	chr3R	5753211	5753253	diver	7	6216	1.0	1.0	1.0	3.5	6258	chr3R	5746995	intergenic	Madm +	chr3R	5750124	intergenic	not near genes	chr3R	5753253	intergenic	CG2091 -	chr3R_7_5750001	chr3R_5750001	OreR-AS-FC
2112	chr3R	5809087	5809143	chr3R	5809353	5809409	pogo	22	266	9.5	3.5	6.5	2.9	322	chr3R	5809087	3` UTR	CG11000 +	chr3R	5809248	3` UTR	CG11000 +	chr3R	5809409	3` UTR	CG11000 +	chr3R_22_5805001	chr3R_5805001	OreR-AS-FC
2113	chr3R	5822363	5822406	chr3R	5823555	5823598	1360	4	1192	22.5	34.0	28.2	0.1	1235	chr3R	5822363	3` UTR	CG2023 -	chr3R	5822980	3` UTR	CG2023 -	chr3R	5823598	3` UTR	CG2023 -	chr3R_4_5820001	chr3R_5820001	OreR-AS-FC
2116	chr3R	5927538	5927584	chr3R	5927803	5927849	pogo	14	265	6.0	5.5	5.8	2.1	311	chr3R	5927538	intron	CG34113 -	chr3R	5927694	intron	CG34113 -	chr3R	5927849	intron	CG34113 -	chr3R_14_5925001	chr3R_5925001	OreR-AS-FC
2126	chr3R	6015937	6015995	chr3R	6024443	6024501	Tirant	51	8506	10.5	17.5	14.0	3.4	8564	chr3R	6015937	intergenic	not near genes	chr3R	6020219	intergenic	not near genes	chr3R	6024501	intergenic	not near genes	chr3R_51_6020001	chr3R_6020001	OreR-AS-FC
2128	chr3R	6158506	6158540	chr3R	6167114	6167148	Tirant	16	8608	7.5	10.0	8.8	1.6	8642	chr3R	6158506	intergenic	not near genes	chr3R	6162827	intergenic	not near genes	chr3R	6167148	intergenic	CG1077 +	chr3R_16_6160001	chr3R_6160001	OreR-AS-FC
2129	chr3R	6175157	6175194	chr3R	6182454	6182491	HMS-Beagle2	8	7297	3.0	3.5	3.2	1.9	7334	chr3R	6175157	intergenic	Osi1 +	chr3R	6178824	intron	CR45194 +	chr3R	6182491	intergenic	CR45194 +	chr3R_8_6175001	chr3R_6175001	OreR-AS-FC
2131	chr3R	6206267	6206310	chr3R	6206509	6206552	BS	29	242	7.5	13.0	10.2	2.6	285	chr3R	6206267	exon	Osi24 +	chr3R	6206410	intron	Osi24 +	chr3R	6206552	intron	Osi24 +	chr3R_29_6205001	chr3R_6205001	OreR-AS-FC
2137	chr3R	6510016	6510051	chr3R	6515122	6515157	jockey	5	5106	1.0	0.5	0.8	2.8	5141	chr3R	6510016	intergenic	not near genes	chr3R	6512586	intergenic	not near genes	chr3R	6515157	intergenic	not near genes	chr3R_5_6510001	chr3R_6510001	OreR-AS-FC
2140	chr3R	6737479	6737526	chr3R	6739291	6739338	Doc	23	1812	6.5	3.5	5.0	3.8	1859	chr3R	6737479	intron	pb -	chr3R	6738408	intron	pb -	chr3R	6739338	intron	pb -	chr3R_23_6735001	chr3R_6735001	OreR-AS-FC
2164	chr3R	7694553	7694607	chr3R	7713639	7713693	invader3	11	19086	4.5	5.0	4.8	1.9	19140	chr3R	7694553	3` UTR	Nlg1 +	chr3R	7704123	intergenic	not near genes	chr3R	7713693	intergenic	not near genes	chr3R_11_7700001	chr3R_7700001	OreR-AS-FC
2165	chr3R	7729454	7729491	chr3R	7737417	7737454	Stalker2	14	7963	3.0	6.0	4.5	2.5	8000	chr3R	7729454	intergenic	not near genes	chr3R	7733454	intergenic	not near genes	chr3R	7737454	intergenic	not near genes	chr3R_14_7730001	chr3R_7730001	OreR-AS-FC
2168	chr3R	7849624	7849677	chr3R	7850815	7850869	1360	8	1192	2.0	2.5	2.2	2.5	1245	chr3R	7849624	intron	CG34384 +	chr3R	7850246	intron	CG34384 +	chr3R	7850869	intron	CG34384 +	chr3R_8_7850001	chr3R_7850001	OreR-AS-FC
2170	chr3R	7973299	7973331	chr3R	7974386	7974418	1360	7	1087	3.0	5.5	4.2	1.3	1119	chr3R	7973299	intergenic	not near genes	chr3R	7973858	intergenic	not near genes	chr3R	7974418	3` UTR	CD98hc -	chr3R_7_7970001	chr3R_7970001	OreR-AS-FC
2175	chr3R	8090543	8090567	chr3R	8094045	8094069	297	14	3502	5.0	20.5	12.8	1.0	3526	chr3R	8090543	intergenic	CR44330 +	chr3R	8092306	intergenic	not near genes	chr3R	8094069	intergenic	CG7900 +	chr3R_14_8090001	chr3R_8090001	OreR-AS-FC
2176	chr3R	8094390	8094434	chr3R	8099720	8099764	Transpac	15	5330	7.5	7.0	7.2	1.8	5374	chr3R	8094390	intron	CG7900 +	chr3R	8097077	intron	CG7900 +	chr3R	8099764	intron	CG7900 +	chr3R_15_8095001	chr3R_8095001	OreR-AS-FC
2177	chr3R	8101737	8101788	chr3R	8104846	8104897	G2	33	3109	11.0	6.0	8.5	3.5	3160	chr3R	8101737	exon	CG7900 +	chr3R	8103317	intron	CG7900 +	chr3R	8104897	3` UTR	CG7900 +	chr3R_33_8100001	chr3R_8100001	OreR-AS-FC
2179	chr3R	8207547	8207584	chr3R	8208417	8208454	F-element	13	870	4.0	10.0	7.0	1.6	907	chr3R	8207547	intergenic	not near genes	chr3R	8208000	intergenic	not near genes	chr3R	8208454	intergenic	not near genes	chr3R_13_8205001	chr3R_8205001	OreR-AS-FC
2189	chr3R	8402984	8403037	chr3R	8412175	8412228	roo	45	9191	10.0	14.5	12.2	3.4	9244	chr3R	8402984	intron	CG45263 -	chr3R	8407606	intron	CG45263 -	chr3R	8412228	intron	CG45263 -	chr3R_45_8405001	chr3R_8405001	OreR-AS-FC
2197	chr3R	8570456	8570503	chr3R	8575117	8575162	HMS-Beagle	8	4660	4.0	4.5	4.2	1.5	4706	chr3R	8570456	intergenic	not near genes	chr3R	8572809	intergenic	not near genes	chr3R	8575162	intergenic	not near genes	chr3R_8_8570001	chr3R_8570001	OreR-AS-FC
2199	chr3R	8601751	8601799	chr3R	8610929	8610977	roo	17	9178	5.0	3.5	4.2	3.3	9226	chr3R	8601751	intron	5-HT2B +	chr3R	8606364	intron	5-HT2B +	chr3R	8610977	intron	5-HT2B +	chr3R_17_8605001	chr3R_8605001	OreR-AS-FC
2202	chr3R	8707331	8707381	chr3R	8709797	8709847	jockey	27	2466	10.5	12.0	11.2	2.2	2516	chr3R	8707331	intergenic	not near genes	chr3R	8708589	intergenic	not near genes	chr3R	8709847	intergenic	not near genes	chr3R_27_8705001	chr3R_8705001	OreR-AS-FC
2216	chr3R	9278769	9278806	chr3R	9284054	9284091	Rt1a	9	5285	5.0	22.0	13.5	0.6	5322	chr3R	9278769	intergenic	not near genes	chr3R	9281430	intergenic	not near genes	chr3R	9284091	intergenic	not near genes	chr3R_9_9280001	chr3R_9280001	OreR-AS-FC
2218	chr3R	9319552	9319602	chr3R	9320012	9320062	jockey	20	460	8.0	10.5	9.2	2.0	510	chr3R	9319552	intron	CG8861 -	chr3R	9319807	intron	CG8861 -	chr3R	9320062	intron	CG8861 -	chr3R_20_9315001	chr3R_9315001	OreR-AS-FC
2219	chr3R	9361824	9361830	chr3R	9362090	9362096	pogo	4	266	5.5	6.0	5.8	0.6	272	chr3R	9361824	3` UTR	CG45050 +	chr3R	9361960	3` UTR	CG45050 +	chr3R	9362096	3` UTR	CG45050 +	chr3R_4_9360001	chr3R_9360001	OreR-AS-FC
2230	chr3R	9699958	9700001	chr3R	9700072	9700115	1360	29	114	13.5	13.0	13.2	2.0	157	chr3R	9699958	intron	Unc-115a -	chr3R	9700036	intron	Unc-115a -	chr3R	9700115	intron	Unc-115a -	chr3R_29_9700001	chr3R_9700001	OreR-AS-FC
2243	chr3R	10196923	10196928	chr3R	10202937	10202940	297	5	6012	46.0	9.0	27.5	0.2	6017	chr3R	10196923	intron	Syn +	chr3R	10199932	intron	Syn +	chr3R	10202940	intron	Syn +	chr3R_5_10195001	chr3R_10195001	OreR-AS-FC
2245	chr3R	10231766	10231815	chr3R	10237368	10237417	mdg3	15	5602	3.0	9.0	6.0	2.1	5651	chr3R	10231766	intron	CG42795 +	chr3R	10234592	intron	CG42795 +	chr3R	10237417	intron	CG42795 +	chr3R_15_10230001	chr3R_10230001	OreR-AS-FC
2246	chr3R	10255365	10255387	chr3R	10260830	10260852	I-element	7	5465	6.5	6.5	6.5	0.9	5487	chr3R	10255365	3` UTR	Sirt6 -	chr3R	10258108	intron	Sirt6 -	chr3R	10260852	exon	Sirt6 -	chr3R_7_10255001	chr3R_10255001	OreR-AS-FC
2257	chr3R	10804153	10804200	chr3R	10811710	10811757	17.6	15	7557	3.5	2.0	2.8	3.9	7604	chr3R	10804153	intergenic	CG14692 -	chr3R	10807955	intergenic	not near genes	chr3R	10811757	3` UTR	CG14693 -	chr3R_15_10805001	chr3R_10805001	OreR-AS-FC
2262	chr3R	10957839	10957885	chr3R	10963253	10963299	Rt1c	36	5413	14.5	8.5	11.5	2.9	5460	chr3R	10957839	intergenic	not near genes	chr3R	10960569	intergenic	not near genes	chr3R	10963299	intergenic	not near genes	chr3R_36_10960001	chr3R_10960001	OreR-AS-FC
2273	chr3R	11379219	11379253	chr3R	11388399	11388433	roo	11	9180	7.5	11.0	9.2	1.1	9214	chr3R	11379219	intron	pros +	chr3R	11383826	intron	pros +	chr3R	11388433	intron	pros +	chr3R_11_11380001	chr3R_11380001	OreR-AS-FC
2283	chr3R	11841038	11841091	chr3R	11846254	11846307	BS	19	5216	16.5	7.0	11.8	1.5	5269	chr3R	11841038	intron	CG6959 -	chr3R	11843672	intron	CG6959 -	chr3R	11846307	intron	CG6959 -	chr3R_19_11840001	chr3R_11840001	OreR-AS-FC
2289	chr3R	12022858	12022914	chr3R	12025060	12025116	pogo	15	2202	3.0	2.0	2.5	4.3	2258	chr3R	12022858	intergenic	not near genes	chr3R	12023987	intergenic	not near genes	chr3R	12025116	intergenic	not near genes	chr3R_15_12020001	chr3R_12020001	OreR-AS-FC
2308	chr3R	12780252	12780303	chr3R	12780390	12780441	BS	8	138	10.5	3.5	7.0	1.0	189	chr3R	12780252	intron	beat-Vc -	chr3R	12780346	intron	beat-Vc -	chr3R	12780441	intron	beat-Vc -	chr3R_8_12780001	chr3R_12780001	OreR-AS-FC
2317	chr3R	12920137	12920179	chr3R	12925365	12925407	copia	16	5228	6.5	5.5	6.0	2.3	5270	chr3R	12920137	intron	beat-Vb +	chr3R	12922772	intron	beat-Vb +	chr3R	12925407	intron	beat-Vb +	chr3R_16_12920001	chr3R_12920001	OreR-AS-FC
2328	chr3R	13135805	13135854	chr3R	13138005	13138054	pogo	18	2200	6.0	8.5	7.2	2.2	2249	chr3R	13135805	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13136930	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13138054	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_18_13135001	chr3R_13135001	OreR-AS-FC
2330	chr3R	13143014	13143065	chr3R	13148615	13148666	mdg3	54	5601	7.0	12.0	9.5	5.1	5652	chr3R	13143014	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13145840	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13148666	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_54_13145001	chr3R_13145001	OreR-AS-FC
2339	chr3R	13311585	13311642	chr3R	13318892	13318918	Doc	4	7292	83.5	6.0	44.8	0.1	7333	chr3R	13311585	exon	CG32473 +	chr3R	13315252	intergenic	not near genes	chr3R	13318918	intergenic	CG45080 -	chr3R_4_13315001	chr3R_13315001	OreR-AS-FC
2362	chr3R	14021624	14021680	chr3R	14023466	14023522	S-element	20	1842	8.0	3.5	5.8	2.9	1898	chr3R	14021624	intron	rdx -	chr3R	14022573	intron	rdx -	chr3R	14023522	intron	rdx -	chr3R_20_14020001	chr3R_14020001	OreR-AS-FC
2365	chr3R	14194407	14194457	chr3R	14203581	14203631	roo	7	9174	6.5	2.5	4.5	1.3	9224	chr3R	14194407	intron	Dop1R1 -	chr3R	14199019	intron	Dop1R1 -	chr3R	14203631	intron	Dop1R1 -	chr3R_7_14195001	chr3R_14195001	OreR-AS-FC
2366	chr3R	14246370	14246406	chr3R	14247891	14247927	jockey	6	1521	28.5	6.5	17.5	0.3	1557	chr3R	14246370	intergenic	not near genes	chr3R	14247148	intergenic	not near genes	chr3R	14247927	intergenic	not near genes	chr3R_6_14245001	chr3R_14245001	OreR-AS-FC
2380	chr3R	15041405	15041452	chr3R	15045198	15045245	Doc	10	3793	3.0	4.0	3.5	2.2	3840	chr3R	15041405	intergenic	not near genes	chr3R	15043325	intergenic	not near genes	chr3R	15045245	intergenic	not near genes	chr3R_10_15040001	chr3R_15040001	OreR-AS-FC
2382	chr3R	15059262	15059273	chr3R	15059498	15059509	BS	5	236	1.5	0.0	0.8	2.8	247	chr3R	15059262	intron	dpr9 -	chr3R	15059386	intron	dpr9 -	chr3R	15059509	intron	dpr9 -	chr3R_5_15055001	chr3R_15055001	OreR-AS-FC
2384	chr3R	15079782	15079821	chr3R	15080048	15080087	pogo	9	266	7.0	0.0	3.5	2.0	305	chr3R	15079782	3` UTR	CG6966 -	chr3R	15079934	3` UTR	CG6966 -	chr3R	15080087	3` UTR	CG6966 -	chr3R_9_15075001	chr3R_15075001	OreR-AS-FC
2386	chr3R	15102497	15102526	chr3R	15109778	15109805	412	4	7280	1.5	5.0	3.2	1.0	7308	chr3R	15102497	intron	CG42788 -	chr3R	15106151	intron	CG42788 -	chr3R	15109805	intron	CG42788 -	chr3R_4_15105001	chr3R_15105001	OreR-AS-FC
2388	chr3R	15132042	15132090	chr3R	15135127	15135181	Juan	37	3088	20.0	15.5	17.8	2.0	3139	chr3R	15132042	intergenic	CG42788 -	chr3R	15133612	intergenic	not near genes	chr3R	15135181	3` UTR	CG6912 -	chr3R_37_15130001	chr3R_15130001	OreR-AS-FC
2390	chr3R	15162523	15162541	chr3R	15167316	15167334	F-element	8	4793	7.0	4.0	5.5	1.2	4811	chr3R	15162523	intron	Gyc88E +	chr3R	15164928	intron	Gyc88E +	chr3R	15167334	intron	Gyc88E +	chr3R_8_15160001	chr3R_15160001	OreR-AS-FC
2398	chr3R	15601149	15601195	chr3R	15608696	15608742	412	17	7547	5.0	9.0	7.0	2.1	7593	chr3R	15601149	intergenic	not near genes	chr3R	15604946	intergenic	not near genes	chr3R	15608742	intergenic	not near genes	chr3R_17_15600001	chr3R_15600001	OreR-AS-FC
2399	chr3R	15618709	15618752	chr3R	15626208	15626251	blood	14	7499	2.5	2.5	2.5	4.0	7542	chr3R	15618709	intergenic	not near genes	chr3R	15622480	intergenic	not near genes	chr3R	15626251	intergenic	not near genes	chr3R_14_15620001	chr3R_15620001	OreR-AS-FC
2415	chr3R	16189383	16189430	chr3R	16189811	16189858	invader4	23	428	6.0	3.5	4.8	4.0	475	chr3R	16189383	intron	sra +	chr3R	16189620	intron	sra +	chr3R	16189858	intron	sra +	chr3R_23_16185001	chr3R_16185001	OreR-AS-FC
2428	chr3R	16756297	16756337	chr3R	16762513	16762553	diver	16	6216	12.5	5.5	9.0	1.6	6256	chr3R	16756297	intron	bxd -	chr3R	16759425	intron	bxd -	chr3R	16762553	intron	bxd -	chr3R_16_16755001	chr3R_16755001	OreR-AS-FC
2438	chr3R	17294646	17294692	chr3R	17295099	17295145	BS	10	453	4.0	7.0	5.5	1.5	499	chr3R	17294646	intergenic	not near genes	chr3R	17294896	intergenic	not near genes	chr3R	17295145	intergenic	not near genes	chr3R_10_17290001	chr3R_17290001	OreR-AS-FC
2440	chr3R	17346667	17346713	chr3R	17348255	17348301	F-element	12	1588	2.0	9.0	5.5	1.8	1634	chr3R	17346667	intron	beat-IIa -	chr3R	17347484	intron	beat-IIa -	chr3R	17348301	intron	beat-IIa -	chr3R_12_17345001	chr3R_17345001	OreR-AS-FC
2446	chr3R	17509224	17509251	chr3R	17516804	17516831	412	24	7580	14.0	17.0	15.5	1.5	7607	chr3R	17509224	intergenic	not near genes	chr3R	17513028	intergenic	not near genes	chr3R	17516831	intergenic	not near genes	chr3R_24_17510001	chr3R_17510001	OreR-AS-FC
2450	chr3R	17591268	17591319	chr3R	17591729	17591780	F-element	18	461	9.0	8.5	8.8	1.8	512	chr3R	17591268	intergenic	not near genes	chr3R	17591524	intergenic	not near genes	chr3R	17591780	intergenic	not near genes	chr3R_18_17590001	chr3R_17590001	OreR-AS-FC
2452	chr3R	17657633	17657657	chr3R	17657809	17657833	INE-1	4	176	26.0	24.5	25.2	0.2	200	chr3R	17657633	intron	CG14322 +	chr3R	17657733	intron	CG14322 +	chr3R	17657833	intron	CG14322 +	chr3R_4_17655001	chr3R_17655001	OreR-AS-FC
2458	chr3R	17925832	17925875	chr3R	17927324	17927367	hobo	20	1492	10.0	10.5	10.2	1.8	1535	chr3R	17925832	intron	cpo +	chr3R	17926600	intron	cpo +	chr3R	17927367	intron	cpo +	chr3R_20_17925001	chr3R_17925001	OreR-AS-FC
2460	chr3R	18032799	18032808	chr3R	18040497	18040506	opus	5	7698	0.0	8.0	4.0	1.0	7707	chr3R	18032799	intergenic	not near genes	chr3R	18036652	intergenic	not near genes	chr3R	18040506	intergenic	not near genes	chr3R_5_18035001	chr3R_18035001	OreR-AS-FC
2461	chr3R	18061575	18061611	chr3R	18063168	18063204	F-element	11	1593	0.5	12.0	6.2	1.5	1629	chr3R	18061575	intergenic	not near genes	chr3R	18062390	intergenic	not near genes	chr3R	18063204	intergenic	not near genes	chr3R_11_18060001	chr3R_18060001	OreR-AS-FC
2468	chr3R	18331758	18331763	chr3R	18333277	18333282	hopper2	4	1519	10.0	1.5	5.8	0.6	1524	chr3R	18331758	3` UTR	CG15803 -	chr3R	18332520	intron	CG15803 -	chr3R	18333282	3` UTR	CG15803 -	chr3R_4_18330001	chr3R_18330001	OreR-AS-FC
2477	chr3R	18606492	18606524	chr3R	18610749	18610781	F-element	11	4257	7.5	4.5	6.0	1.6	4289	chr3R	18606492	intron,intron	qin +,CG14304 -	chr3R	18608636	intron,intron	qin +,CG14304 -	chr3R	18610781	intron,intron	qin +,CG14304 -	chr3R_11_18605001	chr3R_18605001	OreR-AS-FC
2516	chr3R	20109537	20109564	chr3R	20114768	20114795	copia	8	5231	3.0	7.0	5.0	1.3	5258	chr3R	20109537	intergenic	not near genes	chr3R	20112166	intergenic	not near genes	chr3R	20114795	intergenic	CG10887 +	chr3R_8_20110001	chr3R_20110001	OreR-AS-FC
2519	chr3R	20156674	20156711	chr3R	20165869	20165906	roo	15	9195	11.0	4.5	7.8	1.7	9232	chr3R	20156674	intergenic	not near genes	chr3R	20161290	intergenic	not near genes	chr3R	20165906	intergenic	not near genes	chr3R_15_20160001	chr3R_20160001	OreR-AS-FC
2524	chr3R	20245274	20245300	chr3R	20248909	20248935	F-element	6	3635	0.0	0.0	0.0	6.0	3661	chr3R	20245274	3` UTR	Nlg4 +	chr3R	20247104	intergenic	not near genes	chr3R	20248935	intergenic	not near genes	chr3R_6_20245001	chr3R_20245001	OreR-AS-FC
2527	chr3R	20266489	20266534	chr3R	20272985	20273030	Burdock	6	6496	3.5	5.0	4.2	1.2	6541	chr3R	20266489	intron	cic +	chr3R	20269760	intron	cic +	chr3R	20273030	intron	cic +	chr3R_6_20265001	chr3R_20265001	OreR-AS-FC
2531	chr3R	20330984	20331009	chr3R	20331495	20331520	roo	4	511	5.0	1.0	3.0	1.0	536	chr3R	20330984	intergenic	Sirt2 +	chr3R	20331252	intergenic	Sirt2 +	chr3R	20331520	intergenic	not near genes	chr3R_4_20330001	chr3R_20330001	OreR-AS-FC
2540	chr3R	20506569	20506611	chr3R	20507397	20507439	BS	14	828	0.0	11.0	5.5	2.2	870	chr3R	20506569	intergenic	Or92a +	chr3R	20507004	intergenic	CG4288 -	chr3R	20507439	3` UTR	CG4288 -	chr3R_14_20505001	chr3R_20505001	OreR-AS-FC
2541	chr3R	20512983	20513030	chr3R	20515711	20515758	opus	7	2728	5.0	1.0	3.0	1.8	2775	chr3R	20512983	intergenic	not near genes	chr3R	20514370	intergenic	not near genes	chr3R	20515758	intergenic	not near genes	chr3R_7_20510001	chr3R_20510001	OreR-AS-FC
2554	chr3R	20854477	20854503	chr3R	20859292	20859318	Doc	6	4815	11.0	10.5	10.8	0.5	4841	chr3R	20854477	intron	Ir93a -	chr3R	20856898	intron	Ir93a -	chr3R	20859318	exon	Ir93a -	chr3R_6_20855001	chr3R_20855001	OreR-AS-FC
2564	chr3R	21141651	21141705	chr3R	21150157	21150210	Tirant	20	8506	11.0	6.0	8.5	2.1	8559	chr3R	21141651	intron	SNF4Agamma +	chr3R	21145930	intron	SNF4Agamma +	chr3R	21150210	intron	SNF4Agamma +	chr3R_20_21145001	chr3R_21145001	OreR-AS-FC
2580	chr3R	21761097	21761155	chr3R	21768514	21768572	mdg1	37	7417	10.0	19.5	14.8	2.3	7475	chr3R	21761097	exon	CG42335 +	chr3R	21764834	intron	CG42335 +	chr3R	21768572	exon	CG42335 +	chr3R_37_21760001	chr3R_21760001	OreR-AS-FC
2592	chr3R	22234669	22234706	chr3R	22236013	22236050	pogo	9	1344	6.0	10.5	8.2	1.0	1381	chr3R	22234669	intron	SKIP +	chr3R	22235360	intron	SKIP +	chr3R	22236050	intron	SKIP +	chr3R_9_22235001	chr3R_22235001	OreR-AS-FC
2593	chr3R	22239471	22239522	chr3R	22248556	22248595	roo	11	9082	7.5	7.0	7.2	1.3	9124	chr3R	22239471	intron	SKIP +	chr3R	22244033	intron	SKIP +	chr3R	22248595	intron	SKIP +	chr3R_11_22240001	chr3R_22240001	OreR-AS-FC
2598	chr3R	22450519	22450575	chr3R	22453184	22453240	NOF	44	2665	10.5	12.5	11.5	3.5	2721	chr3R	22450519	intron	CG34376 +	chr3R	22451880	intron	CG34376 +	chr3R	22453240	intron	CG34376 +	chr3R_44_22450001	chr3R_22450001	OreR-AS-FC
2621	chr3R	22881183	22881222	chr3R	22884914	22884952	Doc	6	3730	2.0	4.0	3.0	1.5	3769	chr3R	22881183	intergenic	not near genes	chr3R	22883068	intergenic	not near genes	chr3R	22884952	intergenic	not near genes	chr3R_6_22880001	chr3R_22880001	OreR-AS-FC
2640	chr3R	23558376	23558429	chr3R	23560182	23560235	Bari1	20	1806	3.5	8.0	5.8	2.9	1859	chr3R	23558376	intron	beat-IV +	chr3R	23559306	intron	beat-IV +	chr3R	23560235	intron	beat-IV +	chr3R_20_23555001	chr3R_23555001	OreR-AS-FC
2647	chr3R	23684670	23684723	chr3R	23685181	23685234	roo	68	511	22.5	17.0	19.8	3.3	564	chr3R	23684670	exon	CG18754 +	chr3R	23684952	intron	CG18754 +	chr3R	23685234	exon	CG18754 +	chr3R_68_23680001	chr3R_23680001	OreR-AS-FC
2650	chr3R	23835383	23835437	chr3R	23844558	23844610	roo	9	9174	9.0	0.0	4.5	1.6	9227	chr3R	23835383	intron	CG34355 +	chr3R	23839996	intron	CG34355 +	chr3R	23844610	intron	CG34355 +	chr3R_9_23835001	chr3R_23835001	OreR-AS-FC
2657	chr3R	24072063	24072114	chr3R	24072526	24072577	jockey	39	463	11.5	12.0	11.8	3.0	514	chr3R	24072063	intron	4EHP -	chr3R	24072320	intron	4EHP -	chr3R	24072577	intron	4EHP -	chr3R_39_24070001	chr3R_24070001	OreR-AS-FC
2658	chr3R	24076892	24076940	chr3R	24078384	24078432	hobo	27	1492	18.0	9.5	13.8	1.8	1540	chr3R	24076892	intron	4EHP -	chr3R	24077662	intron	4EHP -	chr3R	24078432	intron	4EHP -	chr3R_27_24075001	chr3R_24075001	OreR-AS-FC
2663	chr3R	24207194	24207244	chr3R	24212295	24212345	flea	37	5101	17.0	10.5	13.8	2.5	5151	chr3R	24207194	intron	twin -	chr3R	24209770	intron	twin -	chr3R	24212345	intron	twin -	chr3R_37_24205001	chr3R_24205001	OreR-AS-FC
2672	chr3R	24493254	24493304	chr3R	24493508	24493558	BS	20	254	2.0	5.0	3.5	4.4	304	chr3R	24493254	intergenic	not near genes	chr3R	24493406	intergenic	not near genes	chr3R	24493558	intergenic	not near genes	chr3R_20_24490001	chr3R_24490001	OreR-AS-FC
2675	chr3R	24594652	24594668	chr3R	24594917	24594933	pogo	6	265	6.0	9.5	7.8	0.7	281	chr3R	24594652	intron	mld +	chr3R	24594792	intron	mld +	chr3R	24594933	intron	mld +	chr3R_6_24590001	chr3R_24590001	OreR-AS-FC
2680	chr3R	24730064	24730096	chr3R	24732467	24732499	Doc	23	2403	9.0	0.0	4.5	4.2	2435	chr3R	24730064	intron	tok +	chr3R	24731282	intron	tok +	chr3R	24732499	intron	tok +	chr3R_23_24730001	chr3R_24730001	OreR-AS-FC
2683	chr3R	24927106	24927149	chr3R	24931922	24931965	Doc	18	4816	8.5	14.0	11.2	1.5	4859	chr3R	24927106	intergenic	Trf4-2 +	chr3R	24929536	intergenic	not near genes	chr3R	24931965	intergenic	CG11771 +	chr3R_18_24925001	chr3R_24925001	OreR-AS-FC
2702	chr3R	25725814	25725856	chr3R	25734999	25735041	roo	15	9185	2.0	4.5	3.2	3.6	9227	chr3R	25725814	intron	LpR2 -	chr3R	25730428	intron	LpR2 -	chr3R	25735041	intron	LpR2 -	chr3R_15_25730001	chr3R_25730001	OreR-AS-FC
2704	chr3R	25832672	25832719	chr3R	25841879	25841926	roo	27	9207	4.0	13.0	8.5	2.8	9254	chr3R	25832672	exon	alpha4GT2 +	chr3R	25837299	intron	alpha4GT2 +	chr3R	25841926	exon	alpha4GT2 +	chr3R_27_25835001	chr3R_25835001	OreR-AS-FC
2711	chr3R	26108799	26108816	chr3R	26117407	26117424	Tirant	10	8608	18.0	0.0	9.0	1.0	8625	chr3R	26108799	5` UTR	CG31324 +	chr3R	26113112	intron	CG31324 +	chr3R	26117424	intron	CG31324 +	chr3R_10_26110001	chr3R_26110001	OreR-AS-FC
2718	chr3R	26376301	26376341	chr3R	26385486	26385526	roo	22	9185	8.0	0.0	4.0	4.4	9225	chr3R	26376301	intergenic	not near genes	chr3R	26380914	intergenic	not near genes	chr3R	26385526	intergenic	not near genes	chr3R_22_26380001	chr3R_26380001	OreR-AS-FC
2722	chr3R	26510499	26510532	chr3R	26519579	26519612	roo	4	9080	2.5	9.5	6.0	0.6	9113	chr3R	26510499	intron	plum -	chr3R	26515056	intron	plum -	chr3R	26519612	intron,5` UTR	plum -,CR45226 +	chr3R_4_26515001	chr3R_26515001	OreR-AS-FC
2725	chr3R	26558300	26558356	chr3R	26565638	26565693	Stalker4	29	7338	9.5	11.5	10.5	2.5	7393	chr3R	26558300	intron	scrib +	chr3R	26561996	intron	scrib +	chr3R	26565693	intron	scrib +	chr3R_29_26560001	chr3R_26560001	OreR-AS-FC
2728	chr3R	26642708	26642762	chr3R	26643126	26643181	jockey	8	419	3.5	5.5	4.5	1.5	473	chr3R	26642708	intergenic	not near genes	chr3R	26642944	intergenic	not near genes	chr3R	26643181	intergenic	not near genes	chr3R_8_26640001	chr3R_26640001	OreR-AS-FC
2733	chr3R	26810527	26810579	chr3R	26811037	26811089	roo	14	510	4.0	7.5	5.8	2.1	562	chr3R	26810527	intron	Tl +	chr3R	26810808	intron	Tl +	chr3R	26811089	intron	Tl +	chr3R_14_26810001	chr3R_26810001	OreR-AS-FC
2740	chr3R	27007381	27007418	chr3R	27016541	27016578	roo	9	9160	7.0	4.0	5.5	1.4	9197	chr3R	27007381	intron	RYa-R +	chr3R	27011980	intron	RYa-R +	chr3R	27016578	intron	RYa-R +	chr3R_9_27010001	chr3R_27010001	OreR-AS-FC
2743	chr3R	27140491	27140545	chr3R	27148126	27148180	412	26	7635	13.0	6.5	9.8	2.4	7689	chr3R	27140491	intron	CG6051 -	chr3R	27144336	intron	CG6051 -	chr3R	27148180	intron	CG6051 -	chr3R_26_27140001	chr3R_27140001	OreR-AS-FC
2748	chr3R	27342766	27342824	chr3R	27351372	27351430	Tirant	31	8606	7.5	6.0	6.8	4.0	8664	chr3R	27342766	intron	CG42534 +	chr3R	27347098	intron	CG42534 +	chr3R	27351430	intron	CG42534 +	chr3R_31_27345001	chr3R_27345001	OreR-AS-FC
2754	chr3R	27521150	27521179	chr3R	27530384	27530413	roo	4	9234	3.5	3.5	3.5	0.9	9263	chr3R	27521150	intron	CG12885 +	chr3R	27525782	intron	CG12885 +	chr3R	27530413	intron	CG12885 +	chr3R_4_27525001	chr3R_27525001	OreR-AS-FC
2760	chr3R	27725543	27725588	chr3R	27731010	27731055	I-element	15	5468	11.0	0.0	5.5	2.3	5512	chr3R	27725543	intergenic	not near genes	chr3R	27728299	intergenic	not near genes	chr3R	27731055	intergenic	not near genes	chr3R_15_27725001	chr3R_27725001	OreR-AS-FC
2763	chr3R	27791623	27791648	chr3R	27794792	27794817	Rt1c	24	3168	27.0	14.5	20.8	1.1	3194	chr3R	27791623	intron	CG34353 -	chr3R	27793220	intron	CG34353 -	chr3R	27794817	intron	CG34353 -	chr3R_24_27790001	chr3R_27790001	OreR-AS-FC
2767	chr3R	27856740	27856788	chr3R	27858248	27858296	hopper2	12	1508	4.5	3.5	4.0	2.4	1556	chr3R	27856740	intron	CG34353 -	chr3R	27857518	intron	CG34353 -	chr3R	27858296	intron	CG34353 -	chr3R_12_27855001	chr3R_27855001	OreR-AS-FC
2768	chr3R	27862934	27862969	chr3R	27868264	27868299	Transpac	19	5330	4.0	0.5	2.2	5.9	5365	chr3R	27862934	intron	CG34353 -	chr3R	27865616	intron	CG34353 -	chr3R	27868299	intron	CG34353 -	chr3R_19_27865001	chr3R_27865001	OreR-AS-FC
2769	chr3R	27875674	27875729	chr3R	27882754	27882809	297	29	7080	8.0	6.5	7.2	3.5	7135	chr3R	27875674	intron	CG34353 -	chr3R	27879242	intron	CG34353 -	chr3R	27882809	intron	CG34353 -	chr3R_29_27875001	chr3R_27875001	OreR-AS-FC
2773	chr3R	28068482	28068521	chr3R	28073949	28073988	I-element	8	5467	0.0	8.0	4.0	1.6	5506	chr3R	28068482	intron	CG34362 +	chr3R	28071235	intron	CG34362 +	chr3R	28073988	intron	CG34362 +	chr3R_8_28070001	chr3R_28070001	OreR-AS-FC
2776	chr3R	28173650	28173697	chr3R	28181105	28181152	mdg1	12	7455	2.5	1.5	2.0	4.0	7502	chr3R	28173650	intron	CG34354 +	chr3R	28177401	intron	CG34354 +	chr3R	28181152	intron	CG34354 +	chr3R_12_28175001	chr3R_28175001	OreR-AS-FC
2778	chr3R	28253321	28253366	chr3R	28255856	28255901	jockey	13	2535	5.5	5.0	5.2	2.1	2580	chr3R	28253321	intergenic	not near genes	chr3R	28254611	intergenic	not near genes	chr3R	28255901	intergenic	not near genes	chr3R_13_28250001	chr3R_28250001	OreR-AS-FC
2780	chr3R	28302085	28302121	chr3R	28302549	28302585	jockey	13	464	4.5	6.5	5.5	2.0	500	chr3R	28302085	intergenic	not near genes	chr3R	28302335	intergenic	not near genes	chr3R	28302585	intergenic	not near genes	chr3R_13_28300001	chr3R_28300001	OreR-AS-FC
2790	chr3R	28758258	28758277	chr3R	28763900	28763919	roo	5	5642	11.5	0.0	5.8	0.7	5661	chr3R	28758258	intergenic	aqrs -	chr3R	28761088	intergenic	not near genes	chr3R	28763919	intergenic	not near genes	chr3R_5_28760001	chr3R_28760001	OreR-AS-FC
2791	chr3R	28792858	28792898	chr3R	28797978	28798018	jockey	12	5120	0.0	10.0	5.0	2.0	5160	chr3R	28792858	intergenic	not near genes	chr3R	28795438	intergenic	not near genes	chr3R	28798018	intergenic	not near genes	chr3R_12_28795001	chr3R_28795001	OreR-AS-FC
2806	chr3R	29079360	29079404	chr3R	29080757	29080801	NOF	17	1397	8.5	2.0	5.2	2.7	1441	chr3R	29079360	intron	CG11873 +	chr3R	29080080	intron	CG11873 +	chr3R	29080801	intron	CG11873 +	chr3R_17_29080001	chr3R_29080001	OreR-AS-FC
2816	chr3R	29319813	29319850	chr3R	29320157	29320194	jockey	14	344	2.0	4.5	3.2	3.3	381	chr3R	29319813	intergenic	Cnx99A -	chr3R	29320004	intergenic	Cnx99A -	chr3R	29320194	intergenic	not near genes	chr3R_14_29320001	chr3R_29320001	OreR-AS-FC
2819	chr3R	29406609	29406639	chr3R	29407920	29407950	jockey	22	1311	17.0	18.0	17.5	1.2	1341	chr3R	29406609	intron	Ptp99A +	chr3R	29407280	intron	Ptp99A +	chr3R	29407950	intron	Ptp99A +	chr3R_22_29405001	chr3R_29405001	OreR-AS-FC
2833	chr3R	29738242	29738294	chr3R	29739734	29739786	hobo	23	1492	6.5	8.0	7.2	2.8	1544	chr3R	29738242	intergenic	CG1969 +,CG7598 +	chr3R	29739014	intron	CG1969 +	chr3R	29739786	5` UTR	CG1969 +	chr3R_23_29735001	chr3R_29735001	OreR-AS-FC
2837	chr3R	29881997	29882049	chr3R	29891179	29891231	roo	28	9182	6.5	8.5	7.5	3.3	9234	chr3R	29881997	intron	CG31038 +	chr3R	29886614	intron	CG31038 +	chr3R	29891231	intron	CG31038 +	chr3R_28_29885001	chr3R_29885001	OreR-AS-FC
2846	chr3R	30084841	30084878	chr3R	30086333	30086370	hobo	15	1492	3.5	7.0	5.2	2.4	1529	chr3R	30084841	intron	sima +	chr3R	30085606	intron	sima +	chr3R	30086370	intron	sima +	chr3R_15_30085001	chr3R_30085001	OreR-AS-FC
2854	chr3R	30238753	30238793	chr3R	30239942	30239982	1360	9	1189	5.0	4.5	4.8	1.6	1229	chr3R	30238753	intergenic	not near genes	chr3R	30239368	intergenic	not near genes	chr3R	30239982	intergenic	not near genes	chr3R_9_30235001	chr3R_30235001	OreR-AS-FC
2861	chr3R	30317302	30317355	chr3R	30324919	30324972	roo	16	7617	4.0	3.5	3.8	3.3	7670	chr3R	30317302	intron	hdc +	chr3R	30321137	intron	hdc +	chr3R	30324972	intron	hdc +	chr3R_16_30320001	chr3R_30320001	OreR-AS-FC
2865	chr3R	30375532	30375554	chr3R	30383180	30383202	412	5	7648	8.0	9.5	8.8	0.5	7670	chr3R	30375532	intergenic	not near genes	chr3R	30379367	intergenic	not near genes	chr3R	30383202	intergenic	not near genes	chr3R_5_30375001	chr3R_30375001	OreR-AS-FC
2866	chr3R	30396198	30396237	chr3R	30404489	30404528	roo	12	8291	14.5	7.0	10.8	1.0	8330	chr3R	30396198	intergenic	not near genes	chr3R	30400363	intergenic	not near genes	chr3R	30404528	5` UTR	CR45570 +	chr3R_12_30400001	chr3R_30400001	OreR-AS-FC
2872	chr3R	30480455	30480510	chr3R	30482948	30483003	jockey	24	2493	14.0	7.0	10.5	2.1	2548	chr3R	30480455	intron	PH4alphaEFB +	chr3R	30481729	intron	PH4alphaEFB +	chr3R	30483003	intron	PH4alphaEFB +	chr3R_24_30480001	chr3R_30480001	OreR-AS-FC
2882	chr3R	30679494	30679550	chr3R	30686988	30687044	blood	25	7494	5.0	2.5	3.8	5.2	7550	chr3R	30679494	intergenic	not near genes	chr3R	30683269	intergenic	not near genes	chr3R	30687044	intergenic	not near genes	chr3R_25_30680001	chr3R_30680001	OreR-AS-FC
2886	chr3R	30818790	30818837	chr3R	30820380	30820427	1360	13	1590	4.5	3.0	3.8	2.7	1637	chr3R	30818790	intron	cindr +	chr3R	30819608	intron	cindr +	chr3R	30820427	intron	cindr +	chr3R_13_30815001	chr3R_30815001	OreR-AS-FC
2893	chr3R	31074208	31074262	chr3R	31081831	31081892	springer	14	7626	4.5	0.0	2.2	4.4	7684	chr3R	31074208	intron	Sox100B +	chr3R	31078050	intron	Sox100B +	chr3R	31081892	exon	Sox100B +	chr3R_14_31075001	chr3R_31075001	OreR-AS-FC
2898	chr3R	31279355	31279408	chr3R	31285571	31285625	diver	13	6217	4.0	7.0	5.5	2.0	6270	chr3R	31279355	intergenic	not near genes	chr3R	31282490	intergenic	not near genes	chr3R	31285625	intergenic	not near genes	chr3R_13_31280001	chr3R_31280001	OreR-AS-FC
2900	chr3R	31413067	31413118	chr3R	31418292	31418343	copia	22	5225	15.5	12.5	14.0	1.5	5276	chr3R	31413067	intron	Gprk2 +	chr3R	31415705	intron	Gprk2 +	chr3R	31418343	intron	Gprk2 +	chr3R_22_31415001	chr3R_31415001	OreR-AS-FC
2907	chr3R	31691509	31691562	chr3R	31696300	31696353	Doc	38	4791	19.5	18.5	19.0	1.9	4844	chr3R	31691509	intergenic	not near genes	chr3R	31693931	intergenic	not near genes	chr3R	31696353	intergenic	not near genes	chr3R_38_31690001	chr3R_31690001	OreR-AS-FC
2917	chr3R	31997967	31998022	chr3R	32005462	32005517	blood	27	7495	3.5	3.5	3.5	6.0	7550	chr3R	31997967	intron	heph -	chr3R	32001742	intron	heph -	chr3R	32005517	intron	heph -	chr3R_27_32000001	chr3R_32000001	OreR-AS-FC
2918	chr4	76473	76515	chr4	81941	81983	I-element	10	5468	4.0	5.0	4.5	1.8	5510	chr4	76473	intron	pan +	chr4	79228	intron	pan +	chr4	81983	intron	pan +	chr4_10_75001	chr4_75001	OreR-AS-FC
2920	chr4	671588	671628	chr4	680196	680236	Tirant	16	8608	7.0	12.5	9.8	1.5	8648	chr4	671588	intron	CG11360 +	chr4	675912	intron	CG11360 +	chr4	680236	intron	CG11360 +	chr4_16_675001	chr4_675001	OreR-AS-FC
2924	chrX	295842	295881	chrX	303487	303526	412	28	7645	5.5	8.5	7.0	3.5	7684	chrX	295842	intron	CG3777 +	chrX	299684	intron	CG3777 +	chrX	303526	intron	CG3777 +	chrX_28_295001	chrX_295001	OreR-AS-FC
2925	chrX	318448	318497	chrX	323559	323608	flea	26	5111	10.0	15.0	12.5	1.9	5160	chrX	318448	intron,intron	CG3777 +,CG32816 -	chrX	321028	intron,intron	CG3777 +,CG32816 -	chrX	323608	intron,intron	CG3777 +,CG32816 -	chrX_26_320001	chrX_320001	OreR-AS-FC
2926	chrX	428398	428447	chrX	434608	434657	3S18	17	6210	6.5	5.5	6.0	2.4	6259	chrX	428398	intron	CG32816 -	chrX	431528	intron	CG32816 -	chrX	434657	intron	CG32816 -	chrX_17_430001	chrX_430001	OreR-AS-FC
2927	chrX	551401	551454	chrX	558988	559041	412	46	7587	14.0	8.5	11.2	3.8	7640	chrX	551401	intron	Appl +	chrX	555221	intron	Appl +	chrX	559041	intron	Appl +	chrX_46_555001	chrX_555001	OreR-AS-FC
2931	chrX	812247	812296	chrX	817903	817952	297	22	5656	4.0	2.5	3.2	5.2	5705	chrX	812247	intron	CG43867 -	chrX	815100	intron	CG43867 -	chrX	817952	intron	CG43867 -	chrX_22_815001	chrX_815001	OreR-AS-FC
2932	chrX	827581	827625	chrX	835398	835442	roo	17	7817	5.0	4.0	4.5	3.1	7861	chrX	827581	intron	CG43867 -	chrX	831512	intron	CG43867 -	chrX	835442	intron	CG43867 -	chrX_17_830001	chrX_830001	OreR-AS-FC
2933	chrX	906676	906721	chrX	908490	908535	S-element	37	1814	9.5	12.5	11.0	3.1	1859	chrX	906676	intron	CG43867 -	chrX	907606	intron	CG43867 -	chrX	908535	intron	CG43867 -	chrX_37_905001	chrX_905001	OreR-AS-FC
2936	chrX	1063735	1063750	chrX	1072553	1072568	roo	6	8818	15.0	7.5	11.2	0.5	8833	chrX	1063735	intron	CR44779 +	chrX	1068152	intron	CR44779 +	chrX	1072568	intron	CR44779 +	chrX_6_1065001	chrX_1065001	OreR-AS-FC
2941	chrX	1357756	1357806	chrX	1367951	1368001	Doc	22	10195	7.0	10.5	8.8	2.2	10245	chrX	1357756	intergenic	png -	chrX	1362878	intergenic	not near genes	chrX	1368001	intergenic	not near genes	chrX_22_1360001	chrX_1360001	OreR-AS-FC
2943	chrX	1518011	1518064	chrX	1523446	1523499	jockey	24	5435	9.5	7.0	8.2	2.6	5488	chrX	1518011	intergenic	inc +	chrX	1520755	intergenic	not near genes	chrX	1523499	intergenic	not near genes	chrX_24_1520001	chrX_1520001	OreR-AS-FC
2945	chrX	1627964	1627974	chrX	1635457	1635467	gtwin	14	7493	23.5	13.0	18.2	0.7	7503	chrX	1627964	intron,intron	Mur2B -,br +	chrX	1631716	intron,intron	Mur2B -,br +	chrX	1635467	intron,intron	Mur2B -,br +	chrX_14_1630001	chrX_1630001	OreR-AS-FC
2947	chrX	1930530	1930568	chrX	1938126	1938164	opus	11	7596	1.0	2.5	1.8	3.9	7634	chrX	1930530	intergenic	CG11596 +	chrX	1934347	intergenic	not near genes	chrX	1938164	3` UTR	CG3857 -	chrX_11_1930001	chrX_1930001	OreR-AS-FC
2948	chrX	1954862	1954916	chrX	1962827	1962881	Stalker2	53	7965	17.0	18.0	17.5	2.9	8019	chrX	1954862	intron	Hr4 +	chrX	1958872	intron	Hr4 +	chrX	1962881	intron	Hr4 +	chrX_53_1955001	chrX_1955001	OreR-AS-FC
2949	chrX	2308818	2308822	chrX	2317426	2317430	Tirant	6	8608	14.0	33.5	23.8	0.2	8612	chrX	2308818	intron	phl +	chrX	2313124	intron	phl +	chrX	2317430	intron	phl +	chrX_6_2310001	chrX_2310001	OreR-AS-FC
2952	chrX	2399813	2399871	chrX	2408191	2408237	roo	25	8376	13.0	0.0	6.5	3.3	8424	chrX	2399813	intergenic	not near genes	chrX	2404025	intergenic	not near genes	chrX	2408237	intergenic	not near genes	chrX_25_2400001	chrX_2400001	OreR-AS-FC
2957	chrX	2664365	2664412	chrX	2665536	2665583	1360	21	1171	3.5	3.5	3.5	4.7	1218	chrX	2664365	intron	sgg +	chrX	2664974	intron	sgg +	chrX	2665583	intron	sgg +	chrX_21_2660001	chrX_2660001	OreR-AS-FC
2959	chrX	2823770	2823780	chrX	2832343	2832353	roo	7	8573	10.5	4.5	7.5	0.8	8583	chrX	2823770	intron	kirre +	chrX	2828062	intron	kirre +	chrX	2832353	intron	kirre +	chrX_7_2825001	chrX_2825001	OreR-AS-FC
2960	chrX	2844882	2844929	chrX	2852317	2852364	mdg1	15	7435	1.0	4.0	2.5	4.3	7482	chrX	2844882	intron	kirre +	chrX	2848623	intron	kirre +	chrX	2852364	intron	kirre +	chrX_15_2845001	chrX_2845001	OreR-AS-FC
2964	chrX	3058001	3058041	chrX	3058267	3058307	pogo	12	266	3.0	3.0	3.0	3.0	306	chrX	3058001	intron	kirre +	chrX	3058154	intron	kirre +	chrX	3058307	intron	kirre +	chrX_12_3055001	chrX_3055001	OreR-AS-FC
2970	chrX	3218488	3218534	chrX	3227662	3227708	roo	5	9174	2.0	2.5	2.2	1.6	9220	chrX	3218488	intron	dnc +	chrX	3223098	intron	dnc +	chrX	3227708	intron	dnc +	chrX_5_3220001	chrX_3220001	OreR-AS-FC
2980	chrX	3414996	3415049	chrX	3421206	3421259	3S18	10	6210	1.0	6.0	3.5	2.2	6263	chrX	3414996	intron,intron	CR44999 +,CG12535 -	chrX	3418128	intron,intron	CR44999 +,CG12535 -	chrX	3421259	intron,intron	CR44999 +,CG12535 -	chrX_10_3415001	chrX_3415001	OreR-AS-FC
2982	chrX	3493075	3493120	chrX	3502259	3502304	roo	10	9184	5.0	2.5	3.8	2.1	9229	chrX	3493075	intron,intron	CR44999 +,Gas8 -	chrX	3497690	intron,intron	CR44999 +,Gas8 -	chrX	3502304	intron,intron	CR44999 +,Gas8 -	chrX_10_3495001	chrX_3495001	OreR-AS-FC
2983	chrX	3597528	3597581	chrX	3619721	3619776	roo	33	22193	11.5	9.5	10.5	2.9	22248	chrX	3597528	intron	AstA-R1 +	chrX	3608652	intron	AstA-R1 +	chrX	3619776	intron	AstA-R1 +	chrX_33_3605001	chrX_3605001	OreR-AS-FC
2986	chrX	3726743	3726788	chrX	3730165	3730210	NOF	17	3422	8.0	6.5	7.2	2.1	3467	chrX	3726743	intron	tlk +	chrX	3728476	intron	tlk +	chrX	3730210	intron	tlk +	chrX_17_3725001	chrX_3725001	OreR-AS-FC
2987	chrX	3842331	3842352	chrX	3842569	3842590	pogo	7	239	9.0	5.5	7.2	0.9	259	chrX	3842331	intron	ec +	chrX	3842460	intron	ec +	chrX	3842590	intron	ec +	chrX_7_3840001	chrX_3840001	OreR-AS-FC
2993	chrX	3986843	3986893	chrX	3994501	3994551	412	18	7658	8.0	8.0	8.0	2.0	7708	chrX	3986843	intergenic	not near genes	chrX	3990697	intergenic	not near genes	chrX	3994551	intergenic	not near genes	chrX_18_3990001	chrX_3990001	OreR-AS-FC
2996	chrX	4157871	4157923	chrX	4164949	4165001	297	29	7078	5.0	2.0	3.5	6.4	7130	chrX	4157871	intron	Fas2 -	chrX	4161436	intron	Fas2 -	chrX	4165001	intron	Fas2 -	chrX_29_4160001	chrX_4160001	OreR-AS-FC
3004	chrX	4700369	4700423	chrX	4700737	4700791	jockey	17	368	5.0	2.0	3.5	3.8	422	chrX	4700369	3` UTR	ctp +	chrX	4700580	3` UTR	ctp +	chrX	4700791	3` UTR	ctp +	chrX_17_4700001	chrX_4700001	OreR-AS-FC
3006	chrX	4763227	4763277	chrX	4763740	4763790	Stalker4	17	513	7.0	4.0	5.5	2.6	563	chrX	4763227	intergenic	not near genes	chrX	4763508	intergenic	not near genes	chrX	4763790	intergenic	not near genes	chrX_17_4760001	chrX_4760001	OreR-AS-FC
3007	chrX	4792356	4792402	chrX	4792814	4792860	jockey	11	458	5.0	6.5	5.8	1.6	504	chrX	4792356	intergenic	not near genes	chrX	4792608	intergenic	not near genes	chrX	4792860	intergenic	not near genes	chrX_11_4790001	chrX_4790001	OreR-AS-FC
3009	chrX	4827948	4827994	chrX	4835344	4835390	Stalker4	18	7396	8.0	12.5	10.2	1.6	7442	chrX	4827948	intergenic	not near genes	chrX	4831669	intergenic	not near genes	chrX	4835390	intergenic	not near genes	chrX_18_4830001	chrX_4830001	OreR-AS-FC
3012	chrX	4990018	4990072	chrX	4997257	4997311	roo	13	7239	2.0	4.5	3.2	3.1	7293	chrX	4990018	intron	CR44833 -	chrX	4993664	intron	CR44833 -	chrX	4997311	intron	CR44833 -	chrX_13_4990001	chrX_4990001	OreR-AS-FC
3013	chrX	5096251	5096305	chrX	5103841	5103895	springer	32	7590	9.0	5.0	7.0	4.0	7644	chrX	5096251	intron,intron	CG15465 +,rg +	chrX	5100073	intron,intron	CG15465 +,rg +	chrX	5103895	intron,intron	CG15465 +,rg +	chrX_32_5100001	chrX_5100001	OreR-AS-FC
3018	chrX	5338683	5338713	chrX	5339961	5339991	jockey	10	1278	8.5	7.0	7.8	1.1	1308	chrX	5338683	intergenic	not near genes	chrX	5339337	intergenic	not near genes	chrX	5339991	intergenic	SK +	chrX_10_5335001	chrX_5335001	OreR-AS-FC
3020	chrX	5524819	5524853	chrX	5528703	5528741	412	6	3886	8.5	3.0	5.8	0.9	3922	chrX	5524819	intergenic	snoRNA:Psi28S-3342 -	chrX	5526780	intergenic	not near genes	chrX	5528741	intergenic	Vsx2 -	chrX_6_5525001	chrX_5525001	OreR-AS-FC
3024	chrX	5727403	5727411	chrX	5732167	5732175	Doc	5	4764	5.5	5.5	5.5	0.8	4772	chrX	5727403	intron	CG32758 -	chrX	5729789	intron	CG32758 -	chrX	5732175	intron	CG32758 -	chrX_5_5725001	chrX_5725001	OreR-AS-FC
3028	chrX	5883786	5883830	chrX	5884052	5884096	pogo	10	266	4.5	4.0	4.2	1.9	310	chrX	5883786	intron	CR45668 -	chrX	5883941	intron	CR45668 -	chrX	5884096	intron	CR45668 -	chrX_10_5880001	chrX_5880001	OreR-AS-FC
3029	chrX	5884141	5884189	chrX	5884407	5884455	pogo	12	266	5.0	5.5	5.2	1.9	314	chrX	5884141	intron	CR45668 -	chrX	5884298	intron	CR45668 -	chrX	5884455	intron	CR45668 -	chrX_12_5880001	chrX_5880001	OreR-AS-FC
3032	chrX	6171567	6171600	chrX	6179025	6179058	Quasimodo	11	7458	6.5	11.0	8.8	1.1	7491	chrX	6171567	intron	Ca-alpha1T -	chrX	6175312	intron	Ca-alpha1T -	chrX	6179058	intron	Ca-alpha1T -	chrX_11_6175001	chrX_6175001	OreR-AS-FC
3034	chrX	6335190	6335243	chrX	6337726	6337778	Tirant	10	2535	0.0	7.0	3.5	2.2	2588	chrX	6335190	intergenic	not near genes	chrX	6336484	intergenic	not near genes	chrX	6337778	5` UTR	CG3842 +	chrX_10_6335001	chrX_6335001	OreR-AS-FC
3037	chrX	6392850	6392889	chrX	6397640	6397679	Doc	23	4790	11.5	4.5	8.0	2.6	4829	chrX	6392850	intergenic	not near genes	chrX	6395264	intergenic	not near genes	chrX	6397679	intergenic	not near genes	chrX_23_6395001	chrX_6395001	OreR-AS-FC
3040	chrX	6562796	6562848	chrX	6571303	6571355	Tirant	48	8507	8.0	17.5	12.8	3.5	8559	chrX	6562796	intron	CG34417 +	chrX	6567076	intron	CG34417 +	chrX	6571355	intron	CG34417 +	chrX_48_6565001	chrX_6565001	OreR-AS-FC
3049	chrX	7023579	7023630	chrX	7030994	7031045	Tabor	20	7415	5.5	6.0	5.8	2.9	7466	chrX	7023579	intron	CG12541 -	chrX	7027312	intron	CG12541 -	chrX	7031045	intron	CG12541 -	chrX_20_7025001	chrX_7025001	OreR-AS-FC
3053	chrX	7125223	7125271	chrX	7134407	7134455	roo	9	9184	0.5	2.5	1.5	3.6	9232	chrX	7125223	intergenic	not near genes	chrX	7129839	intergenic	not near genes	chrX	7134455	intergenic	not near genes	chrX_9_7125001	chrX_7125001	OreR-AS-FC
3055	chrX	7845699	7845757	chrX	7847215	7847273	hopper2	26	1516	5.5	4.0	4.8	4.5	1574	chrX	7845699	intergenic	not near genes	chrX	7846486	intergenic	not near genes	chrX	7847273	intergenic	not near genes	chrX_26_7845001	chrX_7845001	OreR-AS-FC
3058	chrX	8031404	8031451	chrX	8035738	8035785	Juan	19	4334	13.0	14.5	13.8	1.3	4381	chrX	8031404	intergenic	not near genes	chrX	8033594	intergenic	not near genes	chrX	8035785	3` UTR	CG2233 -	chrX_19_8030001	chrX_8030001	OreR-AS-FC
3061	chrX	8364841	8364870	chrX	8365263	8365292	BS	9	422	2.0	5.5	3.8	1.9	451	chrX	8364841	intron	nAChRalpha3 -	chrX	8365066	intron	nAChRalpha3 -	chrX	8365292	intron	nAChRalpha3 -	chrX_9_8365001	chrX_8365001	OreR-AS-FC
3068	chrX	8922305	8922353	chrX	8922764	8922812	jockey	21	459	11.0	9.0	10.0	1.9	507	chrX	8922305	intron	rdgA +	chrX	8922558	intron	rdgA +	chrX	8922812	intron	rdgA +	chrX_21_8920001	chrX_8920001	OreR-AS-FC
3069	chrX	8948744	8948770	chrX	8956279	8956305	roo	8	7535	3.0	4.0	3.5	1.8	7561	chrX	8948744	intron	rdgA +	chrX	8952524	intron	rdgA +	chrX	8956305	intron	rdgA +	chrX_8_8950001	chrX_8950001	OreR-AS-FC
3077	chrX	9508114	9508158	chrX	9509657	9509701	jockey	20	1543	7.0	12.5	9.8	1.9	1587	chrX	9508114	intron	CG32700 -	chrX	9508908	intron	CG32700 -	chrX	9509701	intron	CG32700 -	chrX_20_9505001	chrX_9505001	OreR-AS-FC
3078	chrX	9575764	9575821	chrX	9576113	9576170	mdg3	40	349	12.5	11.0	11.8	3.1	406	chrX	9575764	intron,exon	CG32699 -,CG42395 -	chrX	9575967	intron,intron	CG32699 -,CG42395 -	chrX	9576170	intron,5` UTR	CG32699 -,CG42395 -	chrX_40_9575001	chrX_9575001	OreR-AS-FC
3087	chrX	10138197	10138247	chrX	10145726	10145776	412	13	7529	4.0	2.5	3.2	3.1	7579	chrX	10138197	intron,intron	RhoU +,CR44894 -	chrX	10141986	intron,intron	RhoU +,CR44894 -	chrX	10145776	intron,intron	RhoU +,CR44894 -	chrX_13_10140001	chrX_10140001	OreR-AS-FC
3094	chrX	10348793	10348824	chrX	10356383	10356414	springer	5	7590	2.5	4.5	3.5	1.1	7621	chrX	10348793	intergenic	snoRNA:U3:9B +	chrX	10352604	intergenic	not near genes	chrX	10356414	intergenic	l(1)G0289 -	chrX_5_10350001	chrX_10350001	OreR-AS-FC
3097	chrX	10550832	10550886	chrX	10552324	10552378	hobo	28	1492	6.5	15.0	10.8	2.4	1546	chrX	10550832	intron	spri -	chrX	10551605	intron	spri -	chrX	10552378	intron	spri -	chrX_28_10550001	chrX_10550001	OreR-AS-FC
3098	chrX	10686027	10686083	chrX	10691189	10691245	roo	11	5162	2.5	3.5	3.0	2.8	5218	chrX	10686027	intron	X11Lbeta +	chrX	10688636	intron	X11Lbeta +	chrX	10691245	intron	X11Lbeta +	chrX_11_10685001	chrX_10685001	OreR-AS-FC
3099	chrX	10772649	10772698	chrX	10772757	10772806	Tirant	41	108	18.0	12.0	15.0	2.6	157	chrX	10772649	intron	CG15211 +	chrX	10772728	intron	CG15211 +	chrX	10772806	intron	CG15211 +	chrX_41_10770001	chrX_10770001	OreR-AS-FC
3102	chrX	11096005	11096021	chrX	11103132	11103148	HMS-Beagle	5	7127	3.5	12.0	7.8	0.6	7143	chrX	11096005	intergenic	not near genes	chrX	11099576	intergenic	not near genes	chrX	11103148	intron	CG42249 +	chrX_5_11095001	chrX_11095001	OreR-AS-FC
3105	chrX	11184225	11184278	chrX	11189326	11189379	flea	17	5101	9.5	7.0	8.2	1.8	5154	chrX	11184225	intergenic	not near genes	chrX	11186802	intergenic	not near genes	chrX	11189379	intergenic	not near genes	chrX_17_11185001	chrX_11185001	OreR-AS-FC
3108	chrX	11312034	11312087	chrX	11319412	11319465	Stalker2	26	7378	3.0	14.0	8.5	2.7	7431	chrX	11312034	intergenic	not near genes	chrX	11315750	intergenic	not near genes	chrX	11319465	intergenic	not near genes	chrX_26_11315001	chrX_11315001	OreR-AS-FC
3111	chrX	11535024	11535046	chrX	11541519	11541541	Burdock	16	6495	10.0	8.0	9.0	1.6	6517	chrX	11535024	intron	Drak +	chrX	11538282	intron	Drak +	chrX	11541541	intron	Drak +	chrX_16_11535001	chrX_11535001	OreR-AS-FC
3112	chrX	11633401	11633446	chrX	11640480	11640525	297	20	7079	8.0	13.0	10.5	1.7	7124	chrX	11633401	intron	Ptp10D +	chrX	11636963	intron	Ptp10D +	chrX	11640525	intron	Ptp10D +	chrX_20_11635001	chrX_11635001	OreR-AS-FC
3121	chrX	12168115	12168152	chrX	12173582	12173619	I-element	11	5467	6.5	2.5	4.5	2.0	5504	chrX	12168115	intron	Ten-a +	chrX	12170867	intron	Ten-a +	chrX	12173619	intron	Ten-a +	chrX_11_12170001	chrX_12170001	OreR-AS-FC
3125	chrX	12381851	12381896	chrX	12385778	12385823	flea	10	3927	2.5	8.5	5.5	1.5	3972	chrX	12381851	intergenic	not near genes	chrX	12383837	intergenic	not near genes	chrX	12385823	intergenic	not near genes	chrX_10_12380001	chrX_12380001	OreR-AS-FC
3132	chrX	12930573	12930601	chrX	12937714	12937742	HMS-Beagle	8	7141	5.0	6.0	5.5	1.2	7169	chrX	12930573	intron	fne +	chrX	12934158	intron	fne +	chrX	12937742	intron	fne +	chrX_8_12930001	chrX_12930001	OreR-AS-FC
3142	chrX	13429456	13429492	chrX	13430630	13430666	jockey	18	1174	1.0	6.5	3.8	3.8	1210	chrX	13429456	intergenic	not near genes	chrX	13430061	intergenic	not near genes	chrX	13430666	intergenic	not near genes	chrX_18_13430001	chrX_13430001	OreR-AS-FC
3144	chrX	13463623	13463676	chrX	13469225	13469278	mdg3	13	5602	0.5	1.5	1.0	6.5	5655	chrX	13463623	intron	Neto +	chrX	13466450	intron	Neto +	chrX	13469278	intron	Neto +	chrX_13_13465001	chrX_13465001	OreR-AS-FC
3150	chrX	13937957	13938000	chrX	13941253	13941296	I-element	11	3296	3.0	2.0	2.5	3.1	3339	chrX	13937957	intron	mamo -	chrX	13939626	intron	mamo -	chrX	13941296	intron	mamo -	chrX_11_13935001	chrX_13935001	OreR-AS-FC
3153	chrX	14104998	14105050	chrX	14114174	14114226	roo	31	9176	6.0	10.5	8.2	3.4	9228	chrX	14104998	intergenic	not near genes	chrX	14109612	intergenic	not near genes	chrX	14114226	5` UTR	CR44657 +	chrX_31_14105001	chrX_14105001	OreR-AS-FC
3155	chrX	14157572	14157586	chrX	14163254	14163268	297	6	5682	8.0	4.5	6.2	0.8	5696	chrX	14157572	intergenic	not near genes	chrX	14160420	intergenic	not near genes	chrX	14163268	intergenic	not near genes	chrX_6_14160001	chrX_14160001	OreR-AS-FC
3161	chrX	14416305	14416332	chrX	14421097	14421124	F-element	4	4792	2.0	1.0	1.5	1.6	4819	chrX	14416305	intron	dpr8 +	chrX	14418714	intron	dpr8 +	chrX	14421124	intron	dpr8 +	chrX_4_14415001	chrX_14415001	OreR-AS-FC
3165	chrX	14636442	14636498	chrX	14641908	14641964	I-element	13	5466	8.5	4.0	6.2	1.8	5522	chrX	14636442	intron	NetA -	chrX	14639203	intron	NetA -	chrX	14641964	intron	NetA -	chrX_13_14635001	chrX_14635001	OreR-AS-FC
3169	chrX	14778021	14778048	chrX	14782843	14782870	Doc	8	4822	3.0	9.5	6.2	1.1	4849	chrX	14778021	intergenic	CG5347 +	chrX	14780446	intergenic	not near genes	chrX	14782870	intergenic	Ag5r2 -	chrX_8_14780001	chrX_14780001	OreR-AS-FC
3171	chrX	14818738	14818795	chrX	14823967	14824024	copia	21	5229	3.0	6.5	4.8	3.6	5286	chrX	14818738	intron	rut -	chrX	14821381	intron	rut -	chrX	14824024	intron	rut -	chrX_21_14820001	chrX_14820001	OreR-AS-FC
3172	chrX	14936839	14936885	chrX	14946121	14946167	roo	14	9282	4.5	5.0	4.8	2.4	9328	chrX	14936839	intron	pdgy -	chrX	14941503	intron	pdgy -	chrX	14946167	intron	pdgy -	chrX_14_14940001	chrX_14940001	OreR-AS-FC
3175	chrX	15034086	15034088	chrX	15041640	15041646	rover	5	7554	32.5	11.5	22.0	0.2	7560	chrX	15034086	intron,3` UTR	hiw -,be +	chrX	15037866	intron,intron	hiw -,be +	chrX	15041646	intron,3` UTR	hiw -,be +	chrX_5_15035001	chrX_15035001	OreR-AS-FC
3182	chrX	15273679	15273731	chrX	15274871	15274923	1360	37	1192	10.0	16.0	13.0	2.6	1244	chrX	15273679	intergenic	not near genes	chrX	15274301	intergenic	not near genes	chrX	15274923	intergenic	not near genes	chrX_37_15270001	chrX_15270001	OreR-AS-FC
3185	chrX	15413030	15413076	chrX	15417357	15417403	Juan	36	4327	13.0	7.0	10.0	3.3	4373	chrX	15413030	intron	Cngl -	chrX	15415216	intron	Cngl -	chrX	15417403	intron	Cngl -	chrX_36_15415001	chrX_15415001	OreR-AS-FC
3186	chrX	15421896	15421948	chrX	15423432	15423484	pogo	10	1536	2.5	3.0	2.8	2.6	1588	chrX	15421896	intron	Cngl -	chrX	15422690	intron	Cngl -	chrX	15423484	intron	Cngl -	chrX_10_15420001	chrX_15420001	OreR-AS-FC
3198	chrX	16492620	16492673	chrX	16498222	16498275	mdg3	21	5602	9.0	6.0	7.5	2.5	5655	chrX	16492620	intron	para -	chrX	16495448	intron	para -	chrX	16498275	exon	para -	chrX_21_16495001	chrX_16495001	OreR-AS-FC
3203	chrX	16936007	16936029	chrX	16936450	16936472	jockey	13	443	5.0	20.0	12.5	1.0	465	chrX	16936007	intron	CG4928 +	chrX	16936240	intron	CG4928 +	chrX	16936472	intron	CG4928 +	chrX_13_16935001	chrX_16935001	OreR-AS-FC
3208	chrX	17195189	17195211	chrX	17200300	17200322	flea	4	5111	5.5	5.0	5.2	0.6	5133	chrX	17195189	3` UTR	baz +	chrX	17197756	3` UTR	baz +	chrX	17200322	3` UTR	baz +	chrX_4_17195001	chrX_17195001	OreR-AS-FC
3217	chrX	17431337	17431341	chrX	17431703	17431707	jockey	4	366	17.5	6.0	11.8	0.3	370	chrX	17431337	intron	CG12994 -	chrX	17431522	intron	CG12994 -	chrX	17431707	intron	CG12994 -	chrX_4_17430001	chrX_17430001	OreR-AS-FC
3222	chrX	17556917	17556934	chrX	17557441	17557458	mdg1	7	524	16.0	9.0	12.5	0.5	541	chrX	17556917	intron	CG43658 -	chrX	17557188	intron	CG43658 -	chrX	17557458	intron	CG43658 -	chrX_7_17555001	chrX_17555001	OreR-AS-FC
3225	chrX	17792928	17792976	chrX	17796251	17796299	flea	11	3323	5.0	6.5	5.8	1.6	3371	chrX	17792928	intron	OdsH +	chrX	17794614	intron	OdsH +	chrX	17796299	intron	OdsH +	chrX_11_17790001	chrX_17790001	OreR-AS-FC
3232	chrX	18194043	18194097	chrX	18194603	18194657	BS	16	560	7.0	6.0	6.5	2.1	614	chrX	18194043	intron	Frq2 +	chrX	18194350	intron	Frq2 +	chrX	18194657	intron	Frq2 +	chrX_16_18190001	chrX_18190001	OreR-AS-FC
3237	chrX	18429478	18429519	chrX	18434814	18434855	Transpac	11	5336	5.5	9.0	7.2	1.3	5377	chrX	18429478	intergenic	not near genes	chrX	18432166	intergenic	not near genes	chrX	18434855	intergenic	not near genes	chrX_11_18430001	chrX_18430001	OreR-AS-FC
3248	chrX	18754312	18754345	chrX	18758004	18758037	297	11	3692	8.5	6.0	7.2	1.3	3725	chrX	18754312	intergenic	not near genes	chrX	18756174	intergenic	not near genes	chrX	18758037	intergenic	not near genes	chrX_11_18755001	chrX_18755001	OreR-AS-FC
3250	chrX	18957044	18957090	chrX	18965732	18965778	roo	4	8688	1.0	3.5	2.2	1.2	8734	chrX	18957044	intron	CG43759 +	chrX	18961411	intron	CG43759 +	chrX	18965778	intron	CG43759 +	chrX_4_18960001	chrX_18960001	OreR-AS-FC
3255	chrX	19060389	19060436	chrX	19065198	19065245	Doc	9	4809	4.5	6.0	5.2	1.5	4856	chrX	19060389	intron	CG14190 +	chrX	19062817	intron	CG14190 +	chrX	19065245	intron	CG14190 +	chrX_9_19060001	chrX_19060001	OreR-AS-FC
3264	chrX	19136528	19136583	chrX	19143475	19143527	412	24	6945	2.5	16.0	9.2	2.4	6999	chrX	19136528	intergenic	not near genes	chrX	19140028	intergenic	not near genes	chrX	19143527	3` UTR	RhoGAP18B -	chrX_24_19140001	chrX_19140001	OreR-AS-FC
3268	chrX	19356975	19357022	chrX	19358441	19358506	NOF	7	1471	8.0	0.0	4.0	1.4	1531	chrX	19356975	intron	kek5 +	chrX	19357740	intron	kek5 +	chrX	19358506	intron	kek5 +	chrX_7_19355001	chrX_19355001	OreR-AS-FC
3269	chrX	19380138	19380176	chrX	19380404	19380442	pogo	10	266	7.5	6.0	6.8	1.3	304	chrX	19380138	intron	kek5 +	chrX	19380290	intron	kek5 +	chrX	19380442	intron	kek5 +	chrX_10_19380001	chrX_19380001	OreR-AS-FC
3272	chrX	19472110	19472157	chrX	19472705	19472751	jockey	9	595	1.5	3.5	2.5	2.6	641	chrX	19472110	intergenic	kek5 +	chrX	19472430	intergenic	not near genes	chrX	19472751	intergenic	not near genes	chrX_9_19470001	chrX_19470001	OreR-AS-FC
3278	chrX	19710060	19710096	chrX	19711871	19711907	S-element	9	1811	26.5	28.0	27.2	0.3	1847	chrX	19710060	intron	meso18E -	chrX	19710984	intron	meso18E -	chrX	19711907	intron	meso18E -	chrX_9_19710001	chrX_19710001	OreR-AS-FC
3280	chrX	19797322	19797340	chrX	19804662	19804678	Stalker4	6	7339	13.5	5.0	9.2	0.6	7356	chrX	19797322	intergenic	not near genes	chrX	19801000	intergenic	not near genes	chrX	19804678	intergenic	not near genes	chrX_6_19800001	chrX_19800001	OreR-AS-FC
3303	chrX	20377328	20377344	chrX	20378820	20378836	hobo	14	1492	8.5	41.0	24.8	0.5	1508	chrX	20377328	intergenic	not near genes	chrX	20378082	intergenic	not near genes	chrX	20378836	intergenic	not near genes	chrX_14_20375001	chrX_20375001	OreR-AS-FC
3308	chrX	20504102	20504152	chrX	20505648	20505698	transib2	24	1546	9.0	10.5	9.8	2.2	1596	chrX	20504102	intron	RhoGAP19D -	chrX	20504900	intron	RhoGAP19D -	chrX	20505698	intron	RhoGAP19D -	chrX_24_20500001	chrX_20500001	OreR-AS-FC
3314	chrX	20836712	20836756	chrX	20844339	20844383	roo	5	7627	1.0	4.5	2.8	1.3	7671	chrX	20836712	intron	shakB -	chrX	20840548	intron	shakB -	chrX	20844383	intron	shakB -	chrX_5_20840001	chrX_20840001	OreR-AS-FC
3317	chrX	20940699	20940742	chrX	20942193	20942234	hobo	24	1494	12.0	5.0	8.5	2.5	1535	chrX	20940699	intergenic	not near genes	chrX	20941466	intergenic	not near genes	chrX	20942234	intergenic	not near genes	chrX_24_20940001	chrX_20940001	OreR-AS-FC
3324	chrX	21061883	21061894	chrX	21062393	21062404	roo	5	510	0.0	4.5	2.2	1.6	521	chrX	21061883	intron	bves +	chrX	21062144	intron	bves +	chrX	21062404	intron,3` UTR	bves +,CG32512 -	chrX_5_21060001	chrX_21060001	OreR-AS-FC
3330	chrX	21086113	21086156	chrX	21087167	21087210	jockey	14	1054	6.0	7.5	6.8	1.8	1097	chrX	21086113	intergenic	not near genes	chrX	21086662	intergenic	not near genes	chrX	21087210	intergenic	not near genes	chrX_14_21085001	chrX_21085001	OreR-AS-FC
3345	chrX	21458668	21458731	chrX	21464129	21464192	Ivk	11	5461	2.5	3.0	2.8	2.9	5524	chrX	21458668	intergenic	not near genes	chrX	21461430	intergenic	not near genes	chrX	21464192	intergenic	not near genes	chrX_11_21460001	chrX_21460001	OreR-AS-FC
3350	chrX	21595550	21595560	chrX	21598648	21598658	micropia	5	3098	9.5	6.5	8.0	0.6	3108	chrX	21595550	intergenic	not near genes	chrX	21597104	intergenic	not near genes	chrX	21598658	intergenic	not near genes	chrX_5_21595001	chrX_21595001	OreR-AS-FC
3355	chrX	22522614	22522636	chrX	22525459	22525481	NOF	6	2845	6.5	3.0	4.8	1.0	2867	chrX	22522614	intron	CG17600 +	chrX	22524048	intron	CG17600 +	chrX	22525481	intron	CG17600 +	chrX_6_22520001	chrX_22520001	OreR-AS-FC
3357	chrX	22564564	22564584	chrX	22575111	22575131	jockey	6	10547	15.5	5.0	10.2	0.5	10567	chrX	22564564	intergenic	not near genes	chrX	22569848	intergenic	not near genes	chrX	22575131	intergenic	not near genes	chrX_6_22565001	chrX_22565001	OreR-AS-FC
3359	chrX	22697477	22697517	chrX	22701799	22701839	Juan	13	4322	6.5	4.0	5.2	2.1	4362	chrX	22697477	intron	CR44997 +	chrX	22699658	intron	CR44997 +	chrX	22701839	intron	CR44997 +	chrX_13_22695001	chrX_22695001	OreR-AS-FC
3363	chrX	22967367	22967378	chrX	23154543	23154554	diver	4	187176	4.5	9.0	6.8	0.5	187187	chrX	22967367	intergenic	not near genes	chrX	23060960	intergenic	not near genes	chrX	23154554	intergenic	not near genes	chrX_4_23060001	chrX_23060001	OreR-AS-FC
3364	chrX	22987081	22987123	chrX	22989765	22989807	Burdock	8	2684	5.0	4.0	4.5	1.5	2726	chrX	22987081	intron,intron	stnA -,stnB -	chrX	22988444	intron,intron	stnA -,stnB -	chrX	22989807	intron,intron	stnA -,stnB -	chrX_8_22985001	chrX_22985001	OreR-AS-FC
3366	chrX	22996289	22996338	chrX	23003546	23003595	roo	17	7257	7.5	6.0	6.8	2.2	7306	chrX	22996289	intron,intron	stnA -,stnB -	chrX	22999942	intron,intron	stnA -,stnB -	chrX	23003595	intron,intron	stnA -,stnB -	chrX_17_22995001	chrX_22995001	OreR-AS-FC
3367	chrX	23036359	23036402	chrX	23037785	23037828	pogo	9	1426	1.0	2.0	1.5	3.6	1469	chrX	23036359	intron	CG12061 +	chrX	23037094	intron	CG12061 +	chrX	23037828	intron	CG12061 +	chrX_9_23035001	chrX_23035001	OreR-AS-FC