SV# Chr Chr_coord_5p Chr_coord_3p TE TE_coord_start TE_coord_end Reads_collapsed Chr_Coord_Dist Symmetry avg_blat_score Norm_RefGen_Reads Coverage_Ratio classification comments insert_code loci_code Sym_score libname 1 chr2L 1327570 1327638 roo 411 14 11 68 '10-1 68.37 3.6 2.4 intergenic not near genes chr2L_11_1325001 chr2L_1325001 0.91 ISO1-CL1 2 chr2L 2637214 2637275 copia 249 4878 4 61 '1-3 61.91 6.2 0.6 intergenic not near genes chr2L_4_2635001 chr2L_2635001 0.25 ISO1-CL1 3 chr2L 5999691 5999741 hobo 8 2937 7 50 '5-2 58.23 4.9 1.2 intergenic lid - chr2L_7_5995001 chr2L_5995001 0.71 ISO1-CL1 4 chr2L 6554817 6554875 hobo 4 2709 10 58 '9-1 66.65 4.3 1.9 intergenic not near genes chr2L_10_6550001 chr2L_6550001 0.90 ISO1-CL1 5 chr2L 6572393 6572467 hobo 2710 7 7 74 '2-5 68.19 4.0 1.4 3` UTR CG11319 - chr2L_7_6570001 chr2L_6570001 0.29 ISO1-CL1 6 chr2L 6594266 6594337 hobo 2 2709 16 71 '14-2 65.70 9.1 1.6 intron CG11319 - chr2L_16_6590001 chr2L_6590001 0.88 ISO1-CL1 7 chr2L 7366054 7366086 Doc 19 4 14 32 '8-6 63.36 9.8 1.3 intron Wnt10 + chr2L_14_7365001 chr2L_7365001 0.57 ISO1-CL1 8 chr2L 8741232 8741316 F-element 4665 15 6 84 '2-4 67.08 2.5 1.7 intergenic not near genes chr2L_6_8740001 chr2L_8740001 0.33 ISO1-CL1 9 chr2L 10649748 10649819 roo 404 8667 5 71 '2-3 62.92 7.7 0.6 exon CG17097 + chr2L_5_10645001 chr2L_10645001 0.40 ISO1-CL1 10 chr2L 13731392 13731438 hobo 2908 3 12 46 '4-8 61.51 7.0 1.5 intergenic not near genes chr2L_12_13730001 chr2L_13730001 0.33 ISO1-CL1 11 chr2L 14016045 14016071 FB 12 6 7 26 '5-2 63.53 7.7 0.8 intron bgm + chr2L_7_14015001 chr2L_14015001 0.71 ISO1-CL1 12 chr2L 14717052 14717067 I-element 5329 5344 4 15 '1-3 57.89 4.3 0.8 intergenic not near genes chr2L_4_14715001 chr2L_14715001 0.25 ISO1-CL1 13 chr2L 15013842 15013897 hobo 5 2923 8 55 '5-3 65.28 6.5 1.1 intergenic not near genes chr2L_8_15010001 chr2L_15010001 0.62 ISO1-CL1 14 chr2L 15746842 15746909 hobo 2937 11 4 67 '1-3 62.17 4.5 0.7 intron,5` UTR CycE -,CR44974 + chr2L_4_15745001 chr2L_15745001 0.25 ISO1-CL1 15 chr2L 15811989 15812056 hobo 9 2935 4 67 '2-2 57.95 5.3 0.6 exon CG42876 - chr2L_4_15810001 chr2L_15810001 0.50 ISO1-CL1 16 chr2L 15974044 15974104 hobo 2 2923 13 60 '10-3 67.73 5.1 2.1 intergenic not near genes chr2L_13_15970001 chr2L_15970001 0.77 ISO1-CL1 17 chr2L 16021232 16021305 hobo 2934 1 5 73 '2-3 63.12 4.8 0.9 intron beat-Ic + chr2L_5_16020001 chr2L_16020001 0.40 ISO1-CL1 18 chr2L 16076340 16076671 hobo 23 1 12 331 '1-11 69.78 2.1 3.9 intron beat-Ia + chr2L_12_16075001 chr2L_16075001 0.08 ISO1-CL1 19 chr2L 17729575 17729829 hobo 14 2709 11 254 '1-10 64.98 4.0 2.2 intron CadN - chr2L_11_17725001 chr2L_17725001 0.09 ISO1-CL1 20 chr2L 18665275 18665303 Doc 31 4 9 28 '3-6 63.15 4.4 1.7 intergenic not near genes chr2L_9_18665001 chr2L_18665001 0.33 ISO1-CL1 21 chr2L 19422077 19422093 Doc 6 26 4 16 '2-2 56.87 9.2 0.4 intron Pax - chr2L_4_19420001 chr2L_19420001 0.50 ISO1-CL1 22 chr2L 19469546 19469616 roo 8663 398 8 70 '4-4 66.19 7.6 0.9 5` UTR CR45722 + chr2L_8_19465001 chr2L_19465001 0.50 ISO1-CL1 23 chr2R 5941900 5941923 Doc 30 14 9 23 '4-5 61.26 3.3 2.1 intergenic not near genes chr2R_9_5940001 chr2R_5940001 0.44 ISO1-CL1 24 chr2R 6187872 6188051 Tirant 8114 14 17 179 '11-6 66.21 3.0 4.2 intron Ptr - chr2R_17_6185001 chr2R_6185001 0.65 ISO1-CL1 25 chr2R 7131308 7131390 roo 407 8663 29 82 '16-13 66.42 7.1 3.6 intron Cyp9b2 - chr2R_29_7130001 chr2R_7130001 0.55 ISO1-CL1 26 chr2R 7954394 7954460 roo 409 17 16 66 '11-5 74.57 4.9 2.7 intron CG14764 - chr2R_16_7950001 chr2R_7950001 0.69 ISO1-CL1 27 chr2R 8366243 8366302 roo 8671 400 7 59 '5-2 57.95 9.5 0.7 intron,exon pdm3 +,boly - chr2R_7_8365001 chr2R_8365001 0.71 ISO1-CL1 28 chr2R 8528900 8528957 I-element 5334 201 15 57 '5-10 64.05 6.2 2.1 intron mtt - chr2R_15_8525001 chr2R_8525001 0.33 ISO1-CL1 29 chr2R 9016536 9016625 Tirant 403 8108 25 89 '14-11 62.81 4.7 4.4 exon CG13744 - chr2R_25_9015001 chr2R_9015001 0.56 ISO1-CL1 30 chr2R 13365627 13365648 hobo 8 1 5 21 '2-3 62.98 9.2 0.5 intergenic not near genes chr2R_5_13365001 chr2R_13365001 0.40 ISO1-CL1 31 chr2R 14013817 14013838 Doc 10 31 5 21 '3-2 63.93 7.2 0.6 intron mam + chr2R_5_14010001 chr2R_14010001 0.60 ISO1-CL1 32 chr2R 16127231 16127302 FB 2 6 20 71 '12-8 65.62 4.8 3.4 intron spin + chr2R_20_16125001 chr2R_16125001 0.60 ISO1-CL1 33 chr2R 16979676 16979745 HMS-Beagle 246 15 14 69 '11-3 63.29 2.6 3.9 intron Cbp53E + chr2R_14_16975001 chr2R_16975001 0.79 ISO1-CL1 34 chr2R 17459792 17459855 FB 10 6 12 63 '5-7 64.23 2.6 3.3 intron CG14478 + chr2R_12_17455001 chr2R_17455001 0.42 ISO1-CL1 35 chr2R 17491588 17491659 roo 409 8676 22 71 '16-6 65.63 7.2 2.7 exon NT5E-2 + chr2R_22_17490001 chr2R_17490001 0.73 ISO1-CL1 36 chr2R 18196729 18196790 Tirant 22 396 5 61 '2-3 62.76 3.9 1.0 intergenic not near genes chr2R_5_18195001 chr2R_18195001 0.40 ISO1-CL1 37 chr2R 21112018 21112046 Doc 2 25 12 28 '9-3 59.43 6.5 1.6 intron ktub + chr2R_12_21110001 chr2R_21110001 0.75 ISO1-CL1 38 chr2R 22786291 22786345 hobo 2920 1 17 54 '6-11 59.78 4.5 3.1 intron CG42260 - chr2R_17_22785001 chr2R_22785001 0.35 ISO1-CL1 39 chr3L 969667 969742 hobo 1 2935 21 75 '14-7 65.19 5.5 3.2 intron Glut1 + chr3L_21_965001 chr3L_965001 0.67 ISO1-CL1 40 chr3L 2162727 2162795 I-element 4 5350 13 68 '11-2 61.07 5.1 2.1 intron CG15822 - chr3L_13_2160001 chr3L_2160001 0.85 ISO1-CL1 41 chr3L 2717626 2717679 roo 9042 8662 13 53 '6-7 65.89 4.3 2.5 3` UTR Mrtf - chr3L_13_2715001 chr3L_2715001 0.46 ISO1-CL1 42 chr3L 4390359 4390438 roo 8662 403 29 79 '12-17 66.93 6.8 3.7 intron slow + chr3L_29_4390001 chr3L_4390001 0.41 ISO1-CL1 43 chr3L 7394539 7394618 roo 410 8664 8 79 '5-3 68.88 4.0 1.6 intron CG8563 + chr3L_8_7390001 chr3L_7390001 0.62 ISO1-CL1 44 chr3L 10055741 10055810 hobo 8 2936 14 69 '7-7 64.60 4.6 2.5 intron dpr6 + chr3L_14_10055001 chr3L_10055001 0.50 ISO1-CL1 45 chr3L 10278441 10278471 Doc 2 24 9 30 '5-4 58.68 4.2 1.7 intergenic not near genes chr3L_9_10275001 chr3L_10275001 0.56 ISO1-CL1 46 chr3L 14597639 14597700 hobo 2922 2 5 61 '1-4 65.70 2.5 1.4 intron HGTX - chr3L_5_14595001 chr3L_14595001 0.20 ISO1-CL1 47 chr3L 16002253 16002315 FB 5 10 16 62 '5-11 64.31 4.1 3.1 intron CG5830 - chr3L_16_16000001 chr3L_16000001 0.31 ISO1-CL1 48 chr3L 18645637 18645655 Doc 23 9 15 18 '10-5 61.19 2.6 4.2 intron MYPT-75D + chr3L_15_18645001 chr3L_18645001 0.67 ISO1-CL1 49 chr3L 21116014 21116072 I-element 5349 9 7 58 '4-3 63.66 3.9 1.4 intron ko - chr3L_7_21115001 chr3L_21115001 0.57 ISO1-CL1 50 chr3L 22509008 22509079 diver 219 6 22 71 '9-13 62.37 4.8 3.8 intergenic not near genes chr3L_22_22505001 chr3L_22505001 0.41 ISO1-CL1 51 chr3L 25442467 25442525 Chimpo 182 3 4 58 '1-3 58.98 4.8 0.7 intergenic not near genes chr3L_4_25440001 chr3L_25440001 0.25 ISO1-CL1 52 chr3L 25935000 25935020 Doc 33 11 4 20 '2-2 66.28 2.8 1.1 intron CG40178 - chr3L_4_25935001 chr3L_25935001 0.50 ISO1-CL1 53 chr3R 2533852 2533928 gypsy8 250 4902 5 76 '3-2 65.12 7.9 0.6 intergenic not near genes chr3R_5_2530001 chr3R_2530001 0.60 ISO1-CL1 54 chr3R 4992646 4992711 roo 406 8672 14 65 '6-8 67.79 6.3 1.9 intron CG2022 - chr3R_14_4990001 chr3R_4990001 0.43 ISO1-CL1 55 chr3R 6171785 6171806 I-element 2 22 7 21 '3-4 58.69 4.1 1.4 intergenic not near genes chr3R_7_6170001 chr3R_6170001 0.43 ISO1-CL1 56 chr3R 6903866 6903921 roo 8682 399 13 55 '8-5 67.77 5.2 2.1 intron,3` UTR Antp -,CR43252 - chr3R_13_6900001 chr3R_6900001 0.62 ISO1-CL1 57 chr3R 8922902 8922948 FB 29 2 8 46 '4-4 68.45 3.3 1.9 intron pyd - chr3R_8_8920001 chr3R_8920001 0.50 ISO1-CL1 58 chr3R 9798071 9798092 Doc 2 23 6 21 '3-3 58.37 8.9 0.6 3` UTR CG9467 - chr3R_6_9795001 chr3R_9795001 0.50 ISO1-CL1 59 chr3R 10541202 10541257 hobo 1 2922 12 55 '11-1 59.09 7.3 1.4 intron hth - chr3R_12_10540001 chr3R_10540001 0.92 ISO1-CL1 60 chr3R 11515198 11515262 hobo 2708 11 5 64 '1-4 65.21 8.4 0.5 intergenic not near genes chr3R_5_11515001 chr3R_11515001 0.20 ISO1-CL1 61 chr3R 15756311 15756346 hobo 1 29 14 35 '5-9 65.70 7.8 1.6 intergenic not near genes chr3R_14_15755001 chr3R_15755001 0.36 ISO1-CL1 62 chr3R 16133964 16134007 I-element 8 5343 4 43 '3-1 65.83 5.5 0.6 intron Sb + chr3R_4_16130001 chr3R_16130001 0.75 ISO1-CL1 63 chr3R 19503237 19503298 hobo 2928 8 10 61 '2-8 63.69 4.3 1.9 intron Dys + chr3R_10_19500001 chr3R_19500001 0.20 ISO1-CL1 64 chr3R 19564252 19564290 I-element 10 5331 8 38 '4-4 62.50 4.7 1.4 intron Dys + chr3R_8_19560001 chr3R_19560001 0.50 ISO1-CL1 65 chr3R 21616916 21616941 Tirant 8484 390 7 25 '2-5 61.86 4.4 1.3 intron InR - chr3R_7_21615001 chr3R_21615001 0.29 ISO1-CL1 66 chr3R 21809788 21809810 Doc 218 237 8 22 '4-4 54.97 7.3 1.0 intron CASK - chr3R_8_21805001 chr3R_21805001 0.50 ISO1-CL1 67 chr3R 22469093 22469160 hobo 6 2935 14 67 '12-2 65.65 6.2 1.9 intergenic Nrx-1 + chr3R_14_22465001 chr3R_22465001 0.86 ISO1-CL1 68 chr3R 23390890 23390937 I-element 5339 9 10 47 '3-7 66.76 3.6 2.2 intergenic CR43387 + chr3R_10_23390001 chr3R_23390001 0.30 ISO1-CL1 69 chr3R 23601300 23601376 hobo 2938 3 6 76 '4-2 65.84 2.1 1.9 intergenic not near genes chr3R_6_23600001 chr3R_23600001 0.67 ISO1-CL1 70 chr3R 24684623 24684914 hobo 2708 1 17 291 '8-9 64.63 2.1 5.5 intron slo + chr3R_17_24680001 chr3R_24680001 0.47 ISO1-CL1 71 chr3R 24865963 24866002 Doc 93 56 8 39 '4-4 63.87 5.3 1.3 intron Ela + chr3R_8_24865001 chr3R_24865001 0.50 ISO1-CL1 72 chr3R 25532622 25532703 roo 8663 406 11 81 '2-9 70.31 1.9 3.8 intron msi + chr3R_11_25530001 chr3R_25530001 0.18 ISO1-CL1 73 chr3R 25559465 25559488 hobo 27 10 8 23 '4-4 63.80 5.5 1.2 intron msi + chr3R_8_25555001 chr3R_25555001 0.50 ISO1-CL1 74 chr3R 26196689 26196755 I-element 5348 2 18 66 '7-11 66.45 7.4 2.1 intron CR44320 + chr3R_18_26195001 chr3R_26195001 0.39 ISO1-CL1 75 chr3R 26795563 26795626 hobo 5 2930 18 63 '14-4 60.56 6.8 2.3 intergenic not near genes chr3R_18_26795001 chr3R_26795001 0.78 ISO1-CL1 76 chr3R 30801219 30801264 FB 7 25 7 45 '2-5 68.41 6.4 0.9 intron wts - chr3R_7_30800001 chr3R_30800001 0.29 ISO1-CL1 77 chr3R 31884604 31884677 hobo 2936 2 17 73 '6-11 63.63 8.1 1.9 intron heph - chr3R_17_31880001 chr3R_31880001 0.35 ISO1-CL1 78 chr4 940353 940377 Doc 9 34 6 24 '3-3 64.39 2.9 1.5 exon mGluR + chr4_6_940001 chr4_940001 0.50 ISO1-CL1 79 chrX 691412 691461 FB 7 3 4 49 '1-3 63.89 5.2 0.6 intron sdk + chrX_4_690001 chrX_690001 0.25 ISO1-CL1 80 chrX 3562818 3562897 diver 5892 225 24 79 '8-16 65.06 4.9 4.1 intron,intron CG32791 -,ppk8 + chrX_24_3560001 chrX_3560001 0.33 ISO1-CL1 81 chrX 4986688 4986719 copia 4898 4869 4 31 '2-2 66.53 5.6 0.6 intron CR44833 - chrX_4_4985001 chrX_4985001 0.50 ISO1-CL1 82 chrX 6542938 6542992 I-element 11 5344 10 54 '8-2 63.56 6.8 1.3 intron CG34417 + chrX_10_6540001 chrX_6540001 0.80 ISO1-CL1 83 chrX 7905269 7905303 Doc 32 2 11 34 '7-4 65.09 4.7 1.9 3` UTR dpr14 - chrX_11_7905001 chrX_7905001 0.64 ISO1-CL1 84 chrX 9205085 9205159 roo 8663 413 10 74 '5-5 63.83 4.9 1.7 intergenic not near genes chrX_10_9205001 chrX_9205001 0.50 ISO1-CL1 85 chrX 10556273 10556297 Doc 2 23 5 24 '1-4 62.16 1.9 1.7 intron spri - chrX_5_10555001 chrX_10555001 0.20 ISO1-CL1 86 chrX 10757703 10757747 hobo 9 2933 7 44 '2-5 66.81 5.4 1.1 intergenic Rph - chrX_7_10755001 chrX_10755001 0.29 ISO1-CL1 87 chrX 12724941 12725001 FB 3 6 6 60 '3-3 62.92 2.0 2.0 intron,intron Smr -,CR43963 - chrX_6_12720001 chrX_12720001 0.50 ISO1-CL1 88 chrX 13718643 13718713 HMS-Beagle 6796 240 5 70 '2-3 67.80 2.6 1.4 intergenic CG9941 -,CG9940 - chrX_5_13715001 chrX_13715001 0.40 ISO1-CL1 89 chrX 14825769 14825820 Tirant 18 403 5 51 '1-4 69.16 1.4 2.1 intron rut - chrX_5_14825001 chrX_14825001 0.20 ISO1-CL1 90 chrX 15933213 15933271 roo 8661 407 9 58 '6-3 65.92 5.0 1.5 exon Ranbp16 - chrX_9_15930001 chrX_15930001 0.67 ISO1-CL1 91 chrX 20448427 20448486 I-element 5342 3 9 59 '5-4 60.08 3.1 2.2 intergenic not near genes chrX_9_20445001 chrX_20445001 0.56 ISO1-CL1