SV#	Chr_5p	Chr_coord_5p_start	Chr_coord_5p_end	Chr_3p	Chr_coord_3p_start	Chr_coord_3p_end	repName	Reads_collapsed	avg_del_len	RefGen_3prime	Refgen_5prime	RefGen_Avg	Coverage_Ratio	size	Chr_5p	Chr_coord_5p	classification_5p	comment_5p	Chr_mid	Chr_coord_mid	classification_mid	comment_mid	Chr_3p	Chr_coord_3p	classification_3p	comment_3p	depletion_code	loci_code	libname
3	chr2L	2100381	2100399	chr2L	2109544	2109576	roo	14	9171	18.0	27.0	22.5	0.6	9195	chr2L	2100381	intron	dpr3 -	chr2L	2104978	intron	dpr3 -	chr2L	2109576	intron	dpr3 -	chr2L_14_2100001	chr2L_2100001	ISO1-BL
4	chr2L	2100400	2100407	chr2L	2109543	2109550	roo	7	9146	13.0	27.0	20.0	0.3	9150	chr2L	2100400	intron	dpr3 -	chr2L	2104975	intron	dpr3 -	chr2L	2109550	intron	dpr3 -	chr2L_7_2100001	chr2L_2100001	ISO1-BL
5	chr2L	2661177	2661225	chr2L	2663032	2663089	I-element	42	1856	18.0	13.0	15.5	2.5	1912	chr2L	2661177	intergenic	not near genes	chr2L	2662133	intergenic	not near genes	chr2L	2663089	intergenic	not near genes	chr2L_42_2660001	chr2L_2660001	ISO1-BL
6	chr2L	2661226	2661230	chr2L	2663031	2663078	I-element	5	1834	16.5	12.5	14.5	0.3	1852	chr2L	2661226	intergenic	not near genes	chr2L	2662152	intergenic	not near genes	chr2L	2663078	intergenic	not near genes	chr2L_5_2660001	chr2L_2660001	ISO1-BL
7	chr2L	3514737	3514737	chr2L	10242517	10242517	diver	8	6727780	83.0	72.5	77.8	0.1	6727780	chr2L	3514737	intergenic	CG33123 -,CG17593 +	chr2L	6878627	intron	Nlg2 +	chr2L	10242517	3` UTR	chico -	chr2L_8_6875001	chr2L_6875001	ISO1-BL
9	chr2L	6876752	6876808	chr2L	6882969	6883009	diver	40	6216	11.5	14.0	12.8	2.9	6257	chr2L	6876752	intron	Nlg2 +	chr2L	6879880	intron	Nlg2 +	chr2L	6883009	intron	Nlg2 +	chr2L_40_6875001	chr2L_6875001	ISO1-BL
10	chr2L	7977051	7977084	chr2L	7984053	7984084	297	25	6998	27.5	18.5	23.0	1.0	7033	chr2L	7977051	intron	Snoo -	chr2L	7980568	intron	Snoo -	chr2L	7984084	intron,5` UTR	Snoo -,CG7231 +	chr2L_25_7980001	chr2L_7980001	ISO1-BL
11	chr2L	7977085	7977112	chr2L	7984052	7984111	297	22	6994	15.0	18.5	16.8	1.2	7026	chr2L	7977085	intron	Snoo -	chr2L	7980598	intron	Snoo -	chr2L	7984111	intron,5` UTR	Snoo -,CG7231 +	chr2L_22_7980001	chr2L_7980001	ISO1-BL
13	chr2L	8723090	8723131	chr2L	8731493	8731534	Tirant	41	8403	23.5	15.0	19.2	2.0	8444	chr2L	8723090	intron	raw -	chr2L	8727312	intron	raw -	chr2L	8731534	intron	raw -	chr2L_41_8725001	chr2L_8725001	ISO1-BL
14	chr2L	8723134	8723144	chr2L	8731492	8731547	Tirant	7	8397	14.5	15.0	14.8	0.4	8413	chr2L	8723134	intron	raw -	chr2L	8727340	intron	raw -	chr2L	8731547	intron	raw -	chr2L_7_8725001	chr2L_8725001	ISO1-BL
24	chr2L	12861671	12861728	chr2L	12863163	12863221	hobo	67	1491	18.5	17.5	18.0	3.5	1550	chr2L	12861671	intergenic	not near genes	chr2L	12862446	intergenic	not near genes	chr2L	12863221	intergenic	not near genes	chr2L_67_12860001	chr2L_12860001	ISO1-BL
25	chr2L	12894006	12894049	chr2L	12895491	12895537	hobo	45	1491	14.5	16.5	15.5	2.7	1531	chr2L	12894006	intergenic	not near genes	chr2L	12894772	intergenic	not near genes	chr2L	12895537	intergenic	not near genes	chr2L_45_12890001	chr2L_12890001	ISO1-BL
28	chr2L	15956003	15956052	chr2L	15957492	15957545	hobo	55	1493	14.5	16.5	15.5	3.3	1542	chr2L	15956003	intron	beat-Ib -	chr2L	15956774	intron	beat-Ib -	chr2L	15957545	intron	beat-Ib -	chr2L_55_15955001	chr2L_15955001	ISO1-BL
29	chr2L	16071771	16071771	chr2L	16217660	16217660	copia	25	145889	59.0	64.0	61.5	0.4	145889	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217660	intergenic	not near genes	chr2L_25_16140001	chr2L_16140001	ISO1-BL
32	chr2L	16071771	16071771	chr2L	16217660	16217660	copia	20	145889	59.0	64.0	61.5	0.3	145889	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217660	intergenic	not near genes	chr2L_20_16140001	chr2L_16140001	ISO1-BL
35	chr2L	17199137	17199186	chr2L	17200630	17200679	hobo	46	1492	15.5	15.0	15.2	2.8	1542	chr2L	17199137	intron	beat-IIIc -	chr2L	17199908	intron	beat-IIIc -	chr2L	17200679	intron	beat-IIIc -	chr2L_46_17195001	chr2L_17195001	ISO1-BL
36	chr2L	17687491	17687523	chr2L	17692262	17692294	F-element	26	4771	12.5	10.0	11.2	2.1	4803	chr2L	17687491	intron	CadN -	chr2L	17689892	intron	CadN -	chr2L	17692294	intron	CadN -	chr2L_26_17685001	chr2L_17685001	ISO1-BL
37	chr2L	17727843	17727873	chr2L	17729336	17729352	hobo	21	1490	18.0	24.0	21.0	1.0	1509	chr2L	17727843	intron	CadN -	chr2L	17728598	intron	CadN -	chr2L	17729352	intron	CadN -	chr2L_21_17725001	chr2L_17725001	ISO1-BL
38	chr2L	17951924	17951978	chr2L	17953417	17953471	hobo	56	1492	11.0	18.5	14.8	3.5	1547	chr2L	17951924	intergenic	CR44398 -,CR44397 -	chr2L	17952698	intergenic	not near genes	chr2L	17953471	intergenic	not near genes	chr2L_56_17950001	chr2L_17950001	ISO1-BL
45	chr2L	20119762	20119773	chr2L	22969345	22969348	GATE	4	2849578	86.0	64.5	75.2	0.1	2849586	chr2L	20119762	intergenic	not near genes	chr2L	21544555	intergenic	not near genes	chr2L	22969348	intergenic	not near genes	chr2L_4_21540001	chr2L_21540001	ISO1-BL
48	chr2R	676141	676142	chr2R	4122845	4122846	17.6	5	3446704	41.5	77.5	59.5	0.1	3446705	chr2R	676141	intron	CG43676 +	chr2R	2399494	intergenic	not near genes	chr2R	4122846	intergenic	not near genes	chr2R_5_2395001	chr2R_2395001	ISO1-BL
51	chr2R	1516579	1516603	chr2R	1521333	1521357	1731	47	4754	109.5	79.5	94.5	0.5	4778	chr2R	1516579	exon	Maf1 -	chr2R	1518968	intron	Maf1 -	chr2R	1521357	5` UTR	Maf1 -	chr2R_47_1515001	chr2R_1515001	ISO1-BL
52	chr2R	1873404	1873423	chr2R	2880016	2880033	17.6	13	1006611	52.0	16.5	34.2	0.4	1006629	chr2R	1873404	intron	CG17684 -	chr2R	2376718	intergenic	not near genes	chr2R	2880033	intergenic	not near genes	chr2R_13_2375001	chr2R_2375001	ISO1-BL
53	chr2R	3144063	3144110	chr2R	3393367	3393414	Doc	22	249303	64.0	78.5	71.2	0.3	249351	chr2R	3144063	intron	CG42596 +	chr2R	3268738	intergenic	not near genes	chr2R	3393414	intergenic	not near genes	chr2R_22_3265001	chr2R_3265001	ISO1-BL
59	chr2R	7209844	7209849	chr2R	7217618	7217623	roo	6	7774	30.0	32.0	31.0	0.2	7779	chr2R	7209844	intron	pk +	chr2R	7213734	intron	pk +	chr2R	7217623	intron	pk +	chr2R_6_7210001	chr2R_7210001	ISO1-BL
60	chr2R	7209850	7209869	chr2R	7217617	7217643	roo	18	7774	18.5	31.0	24.8	0.7	7793	chr2R	7209850	intron	pk +	chr2R	7213746	intron	pk +	chr2R	7217643	intron	pk +	chr2R_18_7210001	chr2R_7210001	ISO1-BL
61	chr2R	7608382	7608431	chr2R	7613611	7613660	I-element	59	5229	21.5	22.5	22.0	2.6	5278	chr2R	7608382	intron	CG1358 -	chr2R	7611021	intron	CG1358 -	chr2R	7613660	intron	CG1358 -	chr2R_59_7610001	chr2R_7610001	ISO1-BL
62	chr2R	7869166	7869203	chr2R	7873978	7874015	Doc	40	4812	26.5	19.0	22.8	1.7	4849	chr2R	7869166	intron	Dgk -	chr2R	7871590	intron	Dgk -	chr2R	7874015	intron	Dgk -	chr2R_40_7870001	chr2R_7870001	ISO1-BL
63	chr2R	7869204	7869213	chr2R	7873967	7874018	Doc	7	4801	22.5	12.5	17.5	0.4	4814	chr2R	7869204	intron	Dgk -	chr2R	7871611	intron	Dgk -	chr2R	7874018	intron	Dgk -	chr2R_7_7870001	chr2R_7870001	ISO1-BL
64	chr2R	8398189	8398240	chr2R	8402996	8403047	Doc	56	4806	17.5	17.5	17.5	3.0	4858	chr2R	8398189	intron	CG2121 -	chr2R	8400618	intron	CG2121 -	chr2R	8403047	intron	CG2121 -	chr2R_56_8400001	chr2R_8400001	ISO1-BL
66	chr2R	10585573	10585577	chr2R	10594182	10594186	Tirant	7	8609	25.5	34.5	30.0	0.2	8613	chr2R	10585573	intron	psq +	chr2R	10589880	intron	psq +	chr2R	10594186	intron	psq +	chr2R_7_10585001	chr2R_10585001	ISO1-BL
67	chr2R	10585578	10585590	chr2R	10594180	10594199	Tirant	12	8608	17.5	33.5	25.5	0.5	8621	chr2R	10585578	intron	psq +	chr2R	10589888	intron	psq +	chr2R	10594199	intron	psq +	chr2R_12_10585001	chr2R_10585001	ISO1-BL
69	chr2R	13136819	13136864	chr2R	13141643	13141688	Doc	46	4822	19.0	26.0	22.5	2.0	4869	chr2R	13136819	exon	Cap-G +	chr2R	13139254	intron	Cap-G +	chr2R	13141688	intron	Cap-G +	chr2R_46_13135001	chr2R_13135001	ISO1-BL
70	chr2R	14394210	14394214	chr2R	14399025	14399029	Doc	6	4815	49.5	20.0	34.8	0.2	4819	chr2R	14394210	intergenic	not near genes	chr2R	14396620	intergenic	not near genes	chr2R	14399029	intergenic	not near genes	chr2R_6_14395001	chr2R_14395001	ISO1-BL
71	chr2R	14394215	14394220	chr2R	14399024	14399035	Doc	7	4814	45.0	19.5	32.2	0.2	4820	chr2R	14394215	intergenic	not near genes	chr2R	14396625	intergenic	not near genes	chr2R	14399035	intergenic	not near genes	chr2R_7_14395001	chr2R_14395001	ISO1-BL
72	chr2R	15119292	15119347	chr2R	15127799	15127854	Tirant	47	8506	13.5	14.0	13.8	3.2	8562	chr2R	15119292	intron	chn +	chr2R	15123573	intron	chn +	chr2R	15127854	intron	chn +	chr2R_47_15120001	chr2R_15120001	ISO1-BL
73	chr2R	17798405	17798412	chr2R	17798904	17798909	297	7	498	29.5	28.0	28.8	0.2	504	chr2R	17798405	intron	Dhit +	chr2R	17798657	intron	Dhit +	chr2R	17798909	intron	Dhit +	chr2R_7_17795001	chr2R_17795001	ISO1-BL
78	chr3L	1154106	1154160	chr3L	1163282	1163336	roo	51	9176	21.0	18.0	19.5	2.5	9230	chr3L	1154106	intron	bab2 -	chr3L	1158721	intron	bab2 -	chr3L	1163336	intron	bab2 -	chr3L_51_1155001	chr3L_1155001	ISO1-BL
79	chr3L	2927813	2927871	chr3L	2936116	2936174	Tirant	56	8303	16.5	14.0	15.2	3.5	8361	chr3L	2927813	intron	Shab +	chr3L	2931994	intron	Shab +	chr3L	2936174	intron	Shab +	chr3L_56_2930001	chr3L_2930001	ISO1-BL
80	chr3L	3281418	3281440	chr3L	3281940	3281955	Doc	23	519	24.5	13.0	18.8	1.2	537	chr3L	3281418	intron	CG12017 +	chr3L	3281686	intron	CG12017 +	chr3L	3281955	intron	CG12017 +	chr3L_23_3280001	chr3L_3280001	ISO1-BL
81	chr3L	3281442	3281469	chr3L	3281931	3281991	Doc	27	515	14.0	9.5	11.8	2.1	549	chr3L	3281442	intron	CG12017 +	chr3L	3281716	intron	CG12017 +	chr3L	3281991	intron	CG12017 +	chr3L_27_3280001	chr3L_3280001	ISO1-BL
85	chr3L	6855897	6855927	chr3L	6860706	6860736	Doc	25	4808	30.5	18.5	24.5	1.0	4839	chr3L	6855897	intergenic	not near genes	chr3L	6858316	intergenic	not near genes	chr3L	6860736	intergenic	not near genes	chr3L_25_6855001	chr3L_6855001	ISO1-BL
86	chr3L	6855928	6855956	chr3L	6860704	6860704	Doc	18	4794	19.5	17.0	18.2	0.9	4776	chr3L	6855928	intergenic	not near genes	chr3L	6858316	intergenic	not near genes	chr3L	6860704	intergenic	not near genes	chr3L_18_6855001	chr3L_6855001	ISO1-BL
88	chr3L	8481746	8481802	chr3L	8490931	8490986	roo	53	9184	16.5	13.5	15.0	3.3	9240	chr3L	8481746	intron	CG43163 -	chr3L	8486366	intron	CG43163 -	chr3L	8490986	intron	CG43163 -	chr3L_53_8485001	chr3L_8485001	ISO1-BL
89	chr3L	8791252	8791298	chr3L	8796698	8796744	I-element	40	5446	21.0	22.5	21.8	1.8	5492	chr3L	8791252	exon	Fhos +	chr3L	8793998	intron	Fhos +	chr3L	8796744	intron	Fhos +	chr3L_40_8790001	chr3L_8790001	ISO1-BL
91	chr3L	9164672	9164708	chr3L	9166165	9166201	hobo	32	1492	23.0	1.5	12.2	2.4	1529	chr3L	9164672	intron	Rdl -	chr3L	9165436	intron	Rdl -	chr3L	9166201	intron	Rdl -	chr3L_32_9165001	chr3L_9165001	ISO1-BL
94	chr3L	9526467	9526507	chr3L	9528173	9528213	Doc	42	1706	16.5	26.0	21.2	1.9	1746	chr3L	9526467	intergenic	not near genes	chr3L	9527340	intergenic	not near genes	chr3L	9528213	intergenic	not near genes	chr3L_42_9525001	chr3L_9525001	ISO1-BL
104	chr3L	18428495	18428496	chr3L	20525227	20525229	INE-1	7	2096733	66.0	66.0	66.0	0.1	2096734	chr3L	18428495	intergenic	not near genes	chr3L	19476862	intergenic	CG32213 +,CR32207 -	chr3L	20525229	intron	CG4825 -	chr3L_7_19475001	chr3L_19475001	ISO1-BL
110	chr3L	18428496	18428496	chr3L	20525228	20525228	INE-1	10	2096732	66.0	66.0	66.0	0.1	2096732	chr3L	18428496	intergenic	not near genes	chr3L	19476862	intergenic	CG32213 +,CR32207 -	chr3L	20525228	intron	CG4825 -	chr3L_10_19475001	chr3L_19475001	ISO1-BL
121	chr3L	21014889	21014897	chr3L	21023396	21023404	Tirant	4	8507	41.0	17.5	29.2	0.1	8515	chr3L	21014889	intron	skd -	chr3L	21019146	intron	skd -	chr3L	21023404	intron	skd -	chr3L_4_21015001	chr3L_21015001	ISO1-BL
122	chr3L	21014898	21014947	chr3L	21023394	21023454	Tirant	47	8505	14.5	16.0	15.2	2.9	8556	chr3L	21014898	intron	skd -	chr3L	21019176	intron	skd -	chr3L	21023454	intron	skd -	chr3L_47_21015001	chr3L_21015001	ISO1-BL
124	chr3L	21306121	21306176	chr3L	21315306	21315361	roo	52	9185	20.5	19.5	20.0	2.5	9240	chr3L	21306121	3` UTR	CG7632 +	chr3L	21310741	intron	Pc -	chr3L	21315361	3` UTR	Pc -	chr3L_52_21310001	chr3L_21310001	ISO1-BL
127	chr3L	21448026	21448026	chr3L	25486594	25486596	Cr1a	12	4038570	71.0	49.5	60.2	0.2	4038570	chr3L	21448026	3` UTR	Syx7 +	chr3L	23467311	intergenic	not near genes	chr3L	25486596	intron	CG41343 -	chr3L_12_23465001	chr3L_23465001	ISO1-BL
130	chr3L	22577596	22577645	chr3L	22582410	22582459	Doc	45	4813	16.0	17.5	16.8	2.5	4863	chr3L	22577596	intergenic	not near genes	chr3L	22580028	intergenic	not near genes	chr3L	22582459	3` UTR	CG14459 -	chr3L_45_22580001	chr3L_22580001	ISO1-BL
131	chr3L	22865964	22866008	chr3L	22867120	22867167	Doc	46	1159	20.5	19.5	20.0	2.2	1203	chr3L	22865964	intron	CG33170 +	chr3L	22866566	intron	CG33170 +	chr3L	22867167	intron	CG33170 +	chr3L_46_22865001	chr3L_22865001	ISO1-BL
140	chr3L	23611204	23611209	chr3L	27363494	27363499	Gypsy12A_LTR	7	3752290	73.5	60.5	67.0	0.1	3752295	chr3L	23611204	intron	AGO3 +	chr3L	25487352	intron	CG41343 -	chr3L	27363499	intron	Dbp80 +	chr3L_7_25485001	chr3L_25485001	ISO1-BL
141	chr3L	24791870	24791911	chr3L	24796675	24796716	Doc	37	4805	15.5	9.0	12.2	2.8	4846	chr3L	24791870	intergenic	not near genes	chr3L	24794293	intergenic	not near genes	chr3L	24796716	intergenic	not near genes	chr3L_37_24790001	chr3L_24790001	ISO1-BL
142	chr3L	24811048	24811050	chr3L	24821492	24821494	mdg1	6	10444	59.0	52.5	55.8	0.1	10446	chr3L	24811048	intergenic	not near genes	chr3L	24816271	intergenic	not near genes	chr3L	24821494	intergenic	not near genes	chr3L_6_24815001	chr3L_24815001	ISO1-BL
146	chr3L	24811050	24811050	chr3L	24821492	24821492	mdg1	6	10442	59.0	52.5	55.8	0.1	10442	chr3L	24811050	intergenic	not near genes	chr3L	24816271	intergenic	not near genes	chr3L	24821492	intergenic	not near genes	chr3L_6_24815001	chr3L_24815001	ISO1-BL
151	chr3L	25190059	25190093	chr3L	25191235	25191269	1360	18	1176	80.5	76.5	78.5	0.2	1210	chr3L	25190059	intergenic	not near genes	chr3L	25190664	intergenic	not near genes	chr3L	25191269	intergenic	not near genes	chr3L_18_25190001	chr3L_25190001	ISO1-BL
152	chr3L	24894890	24894900	chr3L	25442548	25442553	Idefix	7	547654	56.0	54.0	55.0	0.1	547663	chr3L	24894890	intergenic	not near genes	chr3L	25168722	intergenic	not near genes	chr3L	25442553	intergenic	not near genes	chr3L_7_25165001	chr3L_25165001	ISO1-BL
153	chr3L	23481453	23481455	chr3L	25442556	25442558	Porto1	12	1961103	60.0	53.5	56.8	0.2	1961105	chr3L	23481453	intergenic	not near genes	chr3L	24462006	intergenic	not near genes	chr3L	25442558	intergenic	not near genes	chr3L_12_24460001	chr3L_24460001	ISO1-BL
154	chr3L	21448026	21448027	chr3L	25486593	25486593	Cr1a	7	4038566	71.0	49.5	60.2	0.1	4038567	chr3L	21448026	3` UTR	Syx7 +	chr3L	23467310	intergenic	not near genes	chr3L	25486593	intron	CG41343 -	chr3L_7_23465001	chr3L_23465001	ISO1-BL
155	chr3L	21448026	21448027	chr3L	25486594	25486594	Cr1a	4	4038567	71.0	49.5	60.2	0.1	4038568	chr3L	21448026	3` UTR	Syx7 +	chr3L	23467310	intergenic	not near genes	chr3L	25486594	intron	CG41343 -	chr3L_4_23465001	chr3L_23465001	ISO1-BL
157	chr3L	23941245	23941247	chr3L	26882298	26882300	1360	7	2941053	63.0	11.0	37.0	0.2	2941055	chr3L	23941245	intron	CG40470 -	chr3L	25411772	intergenic	not near genes	chr3L	26882300	intergenic	not near genes	chr3L_7_25410001	chr3L_25410001	ISO1-BL
159	chr3L	21164093	21164093	chr3L	27176040	27176041	ZAM	10	6011946	72.0	82.5	77.2	0.1	6011948	chr3L	21164093	intron	Ac78C -	chr3L	24170067	intron	Snap25 +	chr3L	27176041	intergenic	not near genes	chr3L_10_24170001	chr3L_24170001	ISO1-BL
163	chr3R	97106	97108	chr3R	98955	98957	1360	5	1849	44.5	27.0	35.8	0.1	1851	chr3R	97106	intergenic	not near genes	chr3R	98032	intergenic	not near genes	chr3R	98957	intergenic	not near genes	chr3R_5_95001	chr3R_95001	ISO1-BL
166	chr3R	1012830	1012837	chr3R	3921597	3921604	F-element	14	2908767	58.0	55.0	56.5	0.2	2908774	chr3R	1012830	intergenic	not near genes	chr3R	2467217	intergenic	not near genes	chr3R	3921604	intergenic	not near genes	chr3R_14_2465001	chr3R_2465001	ISO1-BL
168	chr3R	1252444	1252447	chr3R	1266230	1266232	297	9	13785	46.5	46.5	46.5	0.2	13788	chr3R	1252444	intergenic	not near genes	chr3R	1259338	intergenic	not near genes	chr3R	1266232	intergenic	not near genes	chr3R_9_1255001	chr3R_1255001	ISO1-BL
169	chr3R	1252411	1252452	chr3R	1266233	1266237	297	16	13787	48.5	46.5	47.5	0.3	13826	chr3R	1252411	intergenic	not near genes	chr3R	1259324	intergenic	not near genes	chr3R	1266237	intergenic	not near genes	chr3R_16_1255001	chr3R_1255001	ISO1-BL
170	chr3R	1438133	1438135	chr3R	3026649	3026651	HMS-Beagle2	4	1588516	47.5	51.5	49.5	0.1	1588518	chr3R	1438133	intron	CG40155 +	chr3R	2232392	intergenic	not near genes	chr3R	3026651	intron	CG42618 -	chr3R_4_2230001	chr3R_2230001	ISO1-BL
171	chr3R	1511855	1511860	chr3R	2516748	2516787	297	10	1004898	43.0	122.5	82.8	0.1	1004932	chr3R	1511855	intergenic	not near genes	chr3R	2014321	intergenic	not near genes	chr3R	2516787	intergenic	not near genes	chr3R_10_2010001	chr3R_2010001	ISO1-BL
174	chr3R	2650487	2650487	chr3R	12814917	12814917	Stalker2	7	10164430	53.5	58.5	56.0	0.1	10164430	chr3R	2650487	intron	CG41056 -	chr3R	7732702	intergenic	not near genes	chr3R	12814917	intron	CG31345 -	chr3R_7_7730001	chr3R_7730001	ISO1-BL
177	chr3R	1446701	1446774	chr3R	2999354	2999496	invader2	11	1552659	48.5	48.5	48.5	0.2	1552795	chr3R	1446701	intron	CG40155 +	chr3R	2223098	intergenic	not near genes	chr3R	2999496	intron	CG42618 -	chr3R_11_2220001	chr3R_2220001	ISO1-BL
179	chr3R	758765	758768	chr3R	4012589	4012592	1360	4	3253824	23.0	49.5	36.2	0.1	3253827	chr3R	758765	intergenic	not near genes	chr3R	2385678	intergenic	not near genes	chr3R	4012592	intergenic	not near genes	chr3R_4_2385001	chr3R_2385001	ISO1-BL
180	chr3R	3989296	3989307	chr3R	4068939	4068950	mdg1	21	79643	40.0	56.5	48.2	0.4	79654	chr3R	3989296	intergenic	not near genes	chr3R	4029123	intergenic	not near genes	chr3R	4068950	intergenic	not near genes	chr3R_21_4025001	chr3R_4025001	ISO1-BL
181	chr3R	5045818	5045876	chr3R	5052946	5053003	HMS-Beagle	65	7128	13.5	14.0	13.8	4.4	7185	chr3R	5045818	3` UTR	CR43635 -	chr3R	5049410	intergenic	not near genes	chr3R	5053003	intergenic	CR45588 -	chr3R_65_5045001	chr3R_5045001	ISO1-BL
183	chr3R	6158487	6158533	chr3R	6167096	6167142	Tirant	47	8608	14.0	13.0	13.5	3.2	8655	chr3R	6158487	intergenic	not near genes	chr3R	6162814	intergenic	not near genes	chr3R	6167142	intergenic	CG1077 +	chr3R_47_6160001	chr3R_6160001	ISO1-BL
184	chr3R	6158535	6158540	chr3R	6167091	6167147	Tirant	11	8591	13.0	10.5	11.8	0.9	8612	chr3R	6158535	intergenic	not near genes	chr3R	6162841	intergenic	not near genes	chr3R	6167147	intergenic	CG1077 +	chr3R_11_6160001	chr3R_6160001	ISO1-BL
195	chr3R	16756294	16756346	chr3R	16762510	16762563	diver	51	6216	16.0	10.0	13.0	3.6	6269	chr3R	16756294	intron	bxd -	chr3R	16759428	intron	bxd -	chr3R	16762563	intron	bxd -	chr3R_51_16755001	chr3R_16755001	ISO1-BL
199	chr3R	21141649	21141705	chr3R	21150156	21150212	Tirant	51	8506	24.0	17.5	20.8	2.3	8563	chr3R	21141649	intron	SNF4Agamma +	chr3R	21145930	intron	SNF4Agamma +	chr3R	21150212	intron	SNF4Agamma +	chr3R_51_21145001	chr3R_21145001	ISO1-BL
207	chr3R	24076895	24076942	chr3R	24078388	24078435	hobo	56	1493	23.5	23.0	23.2	2.3	1540	chr3R	24076895	intron	4EHP -	chr3R	24077665	intron	4EHP -	chr3R	24078435	intron	4EHP -	chr3R_56_24075001	chr3R_24075001	ISO1-BL
208	chr3R	24076943	24076944	chr3R	24078381	24078437	hobo	4	1474	21.0	19.5	20.2	0.2	1494	chr3R	24076943	intron	4EHP -	chr3R	24077690	intron	4EHP -	chr3R	24078437	intron	4EHP -	chr3R_4_24075001	chr3R_24075001	ISO1-BL
213	chr3R	27342770	27342826	chr3R	27351377	27351433	Tirant	53	8607	17.5	19.0	18.2	2.8	8663	chr3R	27342770	intron	CG42534 +	chr3R	27347102	intron	CG42534 +	chr3R	27351433	intron	CG42534 +	chr3R_53_27345001	chr3R_27345001	ISO1-BL
215	chr3R	27725548	27725590	chr3R	27731016	27731058	I-element	52	5468	19.0	20.0	19.5	2.5	5510	chr3R	27725548	intergenic	not near genes	chr3R	27728303	intergenic	not near genes	chr3R	27731058	intergenic	not near genes	chr3R_52_27725001	chr3R_27725001	ISO1-BL
216	chr3R	28068471	28068518	chr3R	28073939	28073986	I-element	44	5467	22.0	12.5	17.2	2.4	5515	chr3R	28068471	intron	CG34362 +	chr3R	28071228	intron	CG34362 +	chr3R	28073986	intron	CG34362 +	chr3R_44_28070001	chr3R_28070001	ISO1-BL
221	chr3R	29738241	29738296	chr3R	29739734	29739790	hobo	56	1492	17.0	15.0	16.0	3.3	1549	chr3R	29738241	intergenic	CG1969 +,CG7598 +	chr3R	29739016	intron	CG1969 +	chr3R	29739790	5` UTR	CG1969 +	chr3R_56_29735001	chr3R_29735001	ISO1-BL
222	chr3R	30084831	30084879	chr3R	30086324	30086360	hobo	40	1492	21.0	23.5	22.2	1.7	1529	chr3R	30084831	intron	sima +	chr3R	30085596	intron	sima +	chr3R	30086360	intron	sima +	chr3R_40_30085001	chr3R_30085001	ISO1-BL
223	chr3R	31279353	31279405	chr3R	31285570	31285622	diver	46	6216	16.0	18.5	17.2	2.5	6269	chr3R	31279353	intergenic	not near genes	chr3R	31282488	intergenic	not near genes	chr3R	31285622	intergenic	not near genes	chr3R_46_31280001	chr3R_31280001	ISO1-BL
224	chr3R	31691509	31691562	chr3R	31696301	31696354	Doc	76	4792	15.0	18.5	16.8	4.3	4845	chr3R	31691509	intergenic	not near genes	chr3R	31693932	intergenic	not near genes	chr3R	31696354	intergenic	not near genes	chr3R_76_31690001	chr3R_31690001	ISO1-BL
225	chr4	671579	671629	chr4	680186	680238	Tirant	46	8609	19.0	12.0	15.5	2.8	8659	chr4	671579	intron	CG11360 +	chr4	675908	intron	CG11360 +	chr4	680238	intron	CG11360 +	chr4_46_675001	chr4_675001	ISO1-BL
226	chrX	1627964	1627976	chrX	1635458	1635470	gtwin	8	7494	12.5	14.0	13.2	0.6	7506	chrX	1627964	intron,intron	Mur2B -,br +	chrX	1631717	intron,intron	Mur2B -,br +	chrX	1635470	intron,intron	Mur2B -,br +	chrX_8_1630001	chrX_1630001	ISO1-BL
228	chrX	2308817	2308825	chrX	2317426	2317434	Tirant	9	8609	5.5	18.0	11.8	0.7	8617	chrX	2308817	intron	phl +	chrX	2313126	intron	phl +	chrX	2317434	intron	phl +	chrX_9_2310001	chrX_2310001	ISO1-BL
229	chrX	3752386	3752398	chrX	3764761	3764773	17.6	21	12375	41.0	42.5	41.8	0.5	12387	chrX	3752386	intron	tlk +	chrX	3758580	intron	tlk +	chrX	3764773	intron	tlk +	chrX_21_3755001	chrX_3755001	ISO1-BL
232	chrX	6335185	6335241	chrX	6337722	6337777	Tirant	24	2534	0.0	8.5	4.2	4.6	2592	chrX	6335185	intergenic	not near genes	chrX	6336481	intergenic	not near genes	chrX	6337777	5` UTR	CG3842 +	chrX_24_6335001	chrX_6335001	ISO1-BL
233	chrX	6562798	6562847	chrX	6571306	6571355	Tirant	23	8508	6.5	9.5	8.0	2.6	8557	chrX	6562798	intron	CG34417 +	chrX	6567076	intron	CG34417 +	chrX	6571355	intron	CG34417 +	chrX_23_6565001	chrX_6565001	ISO1-BL
236	chrX	10550833	10550881	chrX	10552326	10552374	hobo	24	1493	7.0	13.5	10.2	2.1	1541	chrX	10550833	intron	spri -	chrX	10551604	intron	spri -	chrX	10552374	intron	spri -	chrX_24_10550001	chrX_10550001	ISO1-BL
237	chrX	10772649	10772698	chrX	10772758	10772807	Tirant	24	108	12.0	8.0	10.0	2.2	158	chrX	10772649	intron	CG15211 +	chrX	10772728	intron	CG15211 +	chrX	10772807	intron	CG15211 +	chrX_24_10770001	chrX_10770001	ISO1-BL
239	chrX	11633392	11633445	chrX	11640472	11640525	297	31	7080	10.0	9.5	9.8	2.9	7133	chrX	11633392	intron	Ptp10D +	chrX	11636958	intron	Ptp10D +	chrX	11640525	intron	Ptp10D +	chrX_31_11635001	chrX_11635001	ISO1-BL
246	chrX	12946234	12946234	chrX	19741473	19741479	roo	12	6795240	35.0	35.5	35.2	0.3	6795245	chrX	12946234	3` UTR	fne +	chrX	16343856	intergenic	not near genes	chrX	19741479	intron,3` UTR	CoVIb -,CG18809 -	chrX_12_16340001	chrX_16340001	ISO1-BL
251	chrX	12946235	12946235	chrX	19741474	19741480	roo	9	6795241	36.0	35.5	35.8	0.2	6795245	chrX	12946235	3` UTR	fne +	chrX	16343858	intergenic	not near genes	chrX	19741480	intron,3` UTR	CoVIb -,CG18809 -	chrX_9_16340001	chrX_16340001	ISO1-BL
253	chrX	13937951	13937999	chrX	13941248	13941296	I-element	30	3296	11.0	9.5	10.2	2.7	3345	chrX	13937951	intron	mamo -	chrX	13939624	intron	mamo -	chrX	13941296	intron	mamo -	chrX_30_13935001	chrX_13935001	ISO1-BL
256	chrX	3391432	3391433	chrX	16211213	16211214	297	4	12819781	32.0	16.5	24.2	0.2	12819782	chrX	3391432	intron,3` UTR,3` UTR	CR44999 +,dm +,CG12535 -	chrX	9801323	intron	CG32698 +	chrX	16211214	3` UTR	disco -	chrX_4_9800001	chrX_9800001	ISO1-BL
260	chrX	12946233	12946235	chrX	19741474	19741476	roo	20	6795241	36.0	35.5	35.8	0.5	6795243	chrX	12946233	3` UTR	fne +	chrX	16343854	intergenic	not near genes	chrX	19741476	intron,3` UTR	CoVIb -,CG18809 -	chrX_20_16340001	chrX_16340001	ISO1-BL
261	chrX	20377329	20377341	chrX	20378819	20378834	hobo	6	1492	12.5	19.0	15.8	0.4	1505	chrX	20377329	intergenic	not near genes	chrX	20378082	intergenic	not near genes	chrX	20378834	intergenic	not near genes	chrX_6_20375001	chrX_20375001	ISO1-BL
262	chrX	20940699	20940755	chrX	20942193	20942226	hobo	20	1494	4.5	5.5	5.0	3.3	1527	chrX	20940699	intergenic	not near genes	chrX	20941462	intergenic	not near genes	chrX	20942226	intergenic	not near genes	chrX_20_20940001	chrX_20940001	ISO1-BL
263	chrX	20956967	20957009	chrX	20962435	20962456	I-element	19	5467	10.0	15.0	12.5	1.4	5489	chrX	20956967	intergenic	not near genes	chrX	20959712	intergenic	not near genes	chrX	20962456	intergenic	Ser6 -	chrX_19_20955001	chrX_20955001	ISO1-BL
265	chrX	22259776	22259786	chrX	22260223	22260229	rover	12	446	216.0	19.5	117.8	0.1	453	chrX	22259776	intergenic	not near genes	chrX	22260002	intergenic	not near genes	chrX	22260229	intergenic	not near genes	chrX_12_22260001	chrX_22260001	ISO1-BL
279	chrY	677347	677350	chrY	975835	975840	Cr1a	4	298488	41.5	1140.0	590.8	0.0	298493	chrY	677347	intergenic	not near genes	chrY	826594	intergenic	not near genes	chrY	975840	intergenic	not near genes	chrY_4_825001	chrY_825001	ISO1-BL
280	chrY	676661	676666	chrY	975997	976002	Doc2-element	4	299336	17.5	892.5	455.0	0.0	299341	chrY	676661	intergenic	not near genes	chrY	826332	intergenic	not near genes	chrY	976002	intergenic	not near genes	chrY_4_825001	chrY_825001	ISO1-BL
285	chrY	1431370	1431373	chrY	1447432	1447435	Doc	6	16062	9.0	45.5	27.2	0.2	16065	chrY	1431370	intergenic	not near genes	chrY	1439402	intergenic	not near genes	chrY	1447435	intergenic	not near genes	chrY_6_1435001	chrY_1435001	ISO1-BL