SV#	Chr	Chr_coord_5p	Chr_coord_3p	TE	TE_coord_start	TE_coord_end	Reads_collapsed	Chr_Coord_Dist	Symmetry	avg_blat_score	Norm_RefGen_Reads	Coverage_Ratio	classification	comments	insert_code	loci_code	Sym_score	libname
1	chr2L	137881	138006	HMS-Beagle	240	1	22	125	'14-8	65.15	56.8	0.4	intron	CG11455 +	chr2L_22_135001	chr2L_135001	0.64	ISO1-AS-LSg123
2	chr2L	176696	176823	copia	1	253	53	127	'26-27	66.45	61.9	0.8	intron	spen +	chr2L_53_175001	chr2L_175001	0.49	ISO1-AS-LSg123
3	chr2L	698941	699064	roo	8667	404	95	123	'40-55	65.76	46.6	2.0	intron	ds -	chr2L_95_695001	chr2L_695001	0.42	ISO1-AS-LSg123
4	chr2L	1068654	1068777	FB	1	3	30	123	'14-16	66.66	63.2	0.5	intron	S -	chr2L_30_1065001	chr2L_1065001	0.47	ISO1-AS-LSg123
5	chr2L	1327548	1327678	roo	407	8664	74	130	'44-30	67.64	46.4	1.6	intergenic	not near genes	chr2L_74_1325001	chr2L_1325001	0.59	ISO1-AS-LSg123
6	chr2L	1587551	1587671	copia	4871	248	12	120	'7-5	68.58	65.5	0.2	intron	haf +	chr2L_12_1585001	chr2L_1585001	0.58	ISO1-AS-LSg123
7	chr2L	1678642	1678684	F-element	16	61	9	42	'2-7	65.61	92.0	0.1	intron	chinmo +	chr2L_9_1675001	chr2L_1675001	0.22	ISO1-AS-LSg123
8	chr2L	2014724	2014849	hobo	2938	2	22	125	'10-12	65.40	50.5	0.4	intron	CG4238 +	chr2L_22_2010001	chr2L_2010001	0.45	ISO1-AS-LSg123
9	chr2L	2176862	2176930	FB	22	7	5	68	'3-2	66.26	76.9	0.1	intron	aop -	chr2L_5_2175001	chr2L_2175001	0.60	ISO1-AS-LSg123
10	chr2L	2437560	2437621	copia	26	5081	4	61	'3-1	62.00	74.0	0.1	intron	dpp +	chr2L_4_2435001	chr2L_2435001	0.75	ISO1-AS-LSg123
11	chr2L	2613514	2613563	I-element	5350	5301	81	49	'48-33	64.30	37.5	2.1	intergenic	not near genes	chr2L_81_2610001	chr2L_2610001	0.59	ISO1-AS-LSg123
12	chr2L	2861555	2861637	FB	33	12	13	82	'5-8	64.56	33.9	0.4	intron	CG2991 +	chr2L_13_2860001	chr2L_2860001	0.38	ISO1-AS-LSg123
13	chr2L	4327493	4327601	I-element	3	5350	121	108	'55-66	62.59	42.9	2.8	intron	CG16857 +	chr2L_121_4325001	chr2L_4325001	0.45	ISO1-AS-LSg123
14	chr2L	4327564	4327613	mdg1	7067	7067	16	49	'1-15	74.09	55.0	0.3	intron	CG16857 +	chr2L_16_4325001	chr2L_4325001	0.06	ISO1-AS-LSg123
15	chr2L	5146369	5146470	roo	18	397	6	101	'3-3	66.54	66.6	0.1	intron	Msp300 +	chr2L_6_5145001	chr2L_5145001	0.50	ISO1-AS-LSg123
16	chr2L	5298995	5299120	Tirant	8503	6	31	125	'13-18	67.64	57.4	0.5	intron	vri +	chr2L_31_5295001	chr2L_5295001	0.42	ISO1-AS-LSg123
17	chr2L	5654412	5654518	hobo	2932	15	13	106	'8-5	64.30	55.3	0.2	intron	CG31646 -	chr2L_13_5650001	chr2L_5650001	0.62	ISO1-AS-LSg123
18	chr2L	5931933	5932056	hobo	4	2938	25	123	'14-11	62.11	59.6	0.4	intron	dsf +	chr2L_25_5930001	chr2L_5930001	0.56	ISO1-AS-LSg123
19	chr2L	5999659	5999784	hobo	2	2938	188	125	'85-103	65.71	36.1	5.1	intergenic	lid -	chr2L_188_5995001	chr2L_5995001	0.45	ISO1-AS-LSg123
20	chr2L	6084750	6084871	FB	4	2	33	121	'19-14	65.54	64.4	0.5	intron	Kr-h1 +	chr2L_33_6080001	chr2L_6080001	0.58	ISO1-AS-LSg123
21	chr2L	6400074	6400194	hobo	2933	2	8	120	'1-7	74.88	65.6	0.1	intron	CG42368 -	chr2L_8_6400001	chr2L_6400001	0.12	ISO1-AS-LSg123
22	chr2L	6554772	6554896	hobo	3	2938	160	124	'74-86	65.20	41.8	3.7	intergenic	not near genes	chr2L_160_6550001	chr2L_6550001	0.46	ISO1-AS-LSg123
23	chr2L	6572368	6572496	hobo	2709	2	178	128	'97-81	67.13	39.2	4.4	3` UTR	CG11319 -	chr2L_178_6570001	chr2L_6570001	0.54	ISO1-AS-LSg123
24	chr2L	6594243	6594338	hobo	4	2911	113	95	'73-40	65.82	55.4	2.0	intron	CG11319 -	chr2L_113_6590001	chr2L_6590001	0.65	ISO1-AS-LSg123
25	chr2L	6615096	6615212	copia	247	4875	40	116	'20-20	66.73	60.0	0.7	intron	CG11050 +	chr2L_40_6615001	chr2L_6615001	0.50	ISO1-AS-LSg123
26	chr2L	7366051	7366110	Doc	63	4	96	59	'48-48	65.31	53.4	1.8	intron	Wnt10 +	chr2L_96_7365001	chr2L_7365001	0.50	ISO1-AS-LSg123
27	chr2L	7482808	7482858	F-element	14	64	19	50	'11-8	60.87	79.5	0.2	exon	Ziz -	chr2L_19_7480001	chr2L_7480001	0.58	ISO1-AS-LSg123
28	chr2L	7546050	7546170	Tirant	8	8500	33	120	'16-17	65.49	63.2	0.5	intron	RapGAP1 -	chr2L_33_7545001	chr2L_7545001	0.48	ISO1-AS-LSg123
29	chr2L	7566733	7566855	roo	399	8664	38	122	'20-18	69.11	62.6	0.6	intron	RapGAP1 -	chr2L_38_7565001	chr2L_7565001	0.53	ISO1-AS-LSg123
30	chr2L	7671557	7671683	hobo	1	2938	145	126	'72-73	67.07	44.7	3.2	intron,intron	Slob -,Myo28B1 +	chr2L_145_7670001	chr2L_7670001	0.50	ISO1-AS-LSg123
31	chr2L	8741196	8741338	F-element	4677	17	165	142	'91-74	70.22	40.1	4.0	intergenic	not near genes	chr2L_165_8740001	chr2L_8740001	0.55	ISO1-AS-LSg123
32	chr2L	9485270	9485390	hobo	2932	1	24	120	'8-16	66.44	51.6	0.5	intergenic	not near genes	chr2L_24_9485001	chr2L_9485001	0.33	ISO1-AS-LSg123
33	chr2L	9874639	9874688	hobo	3	52	12	49	'7-5	65.06	79.7	0.1	intron	nAChRalpha6 -	chr2L_12_9870001	chr2L_9870001	0.58	ISO1-AS-LSg123
34	chr2L	10050701	10050838	hobo	1	49	161	137	'74-87	64.92	42.5	3.7	exon	CG33301 +	chr2L_161_10050001	chr2L_10050001	0.46	ISO1-AS-LSg123
35	chr2L	12023117	12023237	roo	8668	403	18	120	'7-11	65.79	62.9	0.3	intergenic	not near genes	chr2L_18_12020001	chr2L_12020001	0.39	ISO1-AS-LSg123
36	chr2L	12137666	12137702	F-element	16	52	16	36	'8-8	56.03	88.1	0.2	intergenic	Gr33a +	chr2L_16_12135001	chr2L_12135001	0.50	ISO1-AS-LSg123
37	chr2L	12143905	12144007	hobo	2937	2	51	102	'5-46	50.36	43.4	1.1	intron	CG31760 +	chr2L_51_12140001	chr2L_12140001	0.10	ISO1-AS-LSg123
38	chr2L	12193185	12193293	copia	25	258	11	108	'5-6	67.45	51.8	0.2	intron	aret +	chr2L_11_12190001	chr2L_12190001	0.45	ISO1-AS-LSg123
39	chr2L	13491336	13491462	hobo	2938	1	160	126	'78-82	65.26	34.8	4.5	intron	CG42784 +	chr2L_160_13490001	chr2L_13490001	0.49	ISO1-AS-LSg123
40	chr2L	13731336	13731463	hobo	2710	2	167	127	'81-86	63.57	36.4	4.5	intergenic	not near genes	chr2L_167_13730001	chr2L_13730001	0.49	ISO1-AS-LSg123
41	chr2L	13734760	13734800	Doc	45	5	6	40	'1-5	70.66	105.1	0.1	intergenic	not near genes	chr2L_6_13730001	chr2L_13730001	0.17	ISO1-AS-LSg123
42	chr2L	14717049	14717097	I-element	5302	5350	54	48	'31-23	65.11	41.1	1.3	intergenic	not near genes	chr2L_54_14715001	chr2L_14715001	0.57	ISO1-AS-LSg123
43	chr2L	15013816	15013935	hobo	7	2937	118	119	'53-65	65.14	36.2	3.2	intergenic	not near genes	chr2L_118_15010001	chr2L_15010001	0.45	ISO1-AS-LSg123
44	chr2L	15811957	15812083	hobo	1	2938	96	126	'53-43	64.58	30.9	3.0	exon	CG42876 -	chr2L_96_15810001	chr2L_15810001	0.55	ISO1-AS-LSg123
45	chr2L	15974023	15974145	hobo	5	2938	68	122	'31-37	64.56	21.8	3.0	intergenic	not near genes	chr2L_68_15970001	chr2L_15970001	0.46	ISO1-AS-LSg123
46	chr2L	17632476	17632597	hobo	2	2934	24	121	'16-8	63.99	8.6	2.5	intergenic	not near genes	chr2L_24_17630001	chr2L_17630001	0.67	ISO1-AS-LSg123
47	chr2L	17729740	17729858	hobo	4	2933	30	118	'10-20	62.12	8.1	3.3	intron	CadN -	chr2L_30_17725001	chr2L_17725001	0.33	ISO1-AS-LSg123
48	chr2L	18341159	18341199	Doc	42	2	18	40	'2-16	66.72	86.3	0.2	intron	Fas3 +	chr2L_18_18340001	chr2L_18340001	0.11	ISO1-AS-LSg123
49	chr2L	18603116	18603239	hobo	2935	1	15	123	'8-7	64.30	64.5	0.2	intron	CG10413 -	chr2L_15_18600001	chr2L_18600001	0.53	ISO1-AS-LSg123
50	chr2L	18665217	18665330	Doc	4639	1	91	113	'2-89	63.55	47.8	1.9	intergenic	not near genes	chr2L_91_18665001	chr2L_18665001	0.02	ISO1-AS-LSg123
51	chr2L	19422045	19422164	Doc	2	4639	103	119	'100-3	58.74	48.6	2.1	intron	Pax -	chr2L_103_19420001	chr2L_19420001	0.97	ISO1-AS-LSg123
52	chr2L	19550255	19550379	HMS-Beagle	241	6799	23	124	'7-16	67.65	61.5	0.4	intron	Tep4 +	chr2L_23_19550001	chr2L_19550001	0.30	ISO1-AS-LSg123
53	chr2L	19702527	19702637	hobo	2925	4	24	110	'13-11	63.72	53.7	0.4	intron	Lar +	chr2L_24_19700001	chr2L_19700001	0.54	ISO1-AS-LSg123
54	chr2L	20545632	20545736	roo	5	387	6	104	'4-2	65.00	57.0	0.1	intergenic	not near genes	chr2L_6_20545001	chr2L_20545001	0.67	ISO1-AS-LSg123
55	chr2L	20858270	20858384	copia	4882	252	20	114	'9-11	62.03	61.5	0.3	intergenic	CG14400 -,CG9336 +	chr2L_20_20855001	chr2L_20855001	0.45	ISO1-AS-LSg123
56	chr2L	21049448	21049563	FB	4	8	26	115	'12-14	61.78	60.6	0.4	intron	CG42238 -	chr2L_26_21045001	chr2L_21045001	0.46	ISO1-AS-LSg123
57	chr2L	21795208	21795322	copia	255	4885	23	114	'16-7	66.97	61.8	0.4	intron	CG31612 -	chr2L_23_21795001	chr2L_21795001	0.70	ISO1-AS-LSg123
58	chr2L	22000368	22000487	roo	9065	8669	73	119	'39-34	67.56	17.0	4.1	intron	CR44916 -	chr2L_73_22000001	chr2L_22000001	0.53	ISO1-AS-LSg123
59	chr2L	22242574	22242623	F-element	60	11	50	49	'29-21	62.06	49.4	1.0	3` UTR	CG3262 +	chr2L_50_22240001	chr2L_22240001	0.58	ISO1-AS-LSg123
60	chr2R	5467815	5467862	F-element	14	61	11	47	'6-5	65.78	61.7	0.2	intergenic	not near genes	chr2R_11_5465001	chr2R_5465001	0.55	ISO1-AS-LSg123
61	chr2R	5485204	5485331	copia	5	257	42	127	'23-19	64.59	40.0	1.0	intron	CG30440 -	chr2R_42_5485001	chr2R_5485001	0.55	ISO1-AS-LSg123
62	chr2R	5609053	5609153	FB	14	13	4	100	'2-2	63.00	69.3	0.1	exon	CG17508 +	chr2R_4_5605001	chr2R_5605001	0.50	ISO1-AS-LSg123
63	chr2R	5677990	5678027	Doc	11	48	5	37	'2-3	63.40	92.7	0.1	exon	scaf -	chr2R_5_5675001	chr2R_5675001	0.40	ISO1-AS-LSg123
64	chr2R	5941902	5941960	Doc	59	3	102	58	'54-48	66.28	43.7	2.3	intergenic	not near genes	chr2R_102_5940001	chr2R_5940001	0.53	ISO1-AS-LSg123
65	chr2R	6187836	6188088	Tirant	8108	3	356	252	'188-168	66.19	25.3	13.5	intron	Ptr -	chr2R_356_6185001	chr2R_6185001	0.53	ISO1-AS-LSg123
66	chr2R	6507075	6507194	FB	5	3	18	119	'7-11	69.36	56.3	0.3	intron	jing +	chr2R_18_6505001	chr2R_6505001	0.39	ISO1-AS-LSg123
67	chr2R	6968450	6968541	FB	18	18	9	91	'5-4	62.56	57.0	0.2	intron,intron	mim -,CheB42c -	chr2R_9_6965001	chr2R_6965001	0.56	ISO1-AS-LSg123
68	chr2R	7131282	7131412	roo	409	1	195	130	'106-89	67.55	41.0	4.6	intron	Cyp9b2 -	chr2R_195_7130001	chr2R_7130001	0.54	ISO1-AS-LSg123
69	chr2R	7487463	7487579	copia	251	4879	25	116	'17-8	66.87	63.5	0.4	intron	wech -	chr2R_25_7485001	chr2R_7485001	0.68	ISO1-AS-LSg123
70	chr2R	7880220	7880330	copia	240	4874	6	110	'3-3	65.33	59.8	0.1	intron	Dgk -	chr2R_6_7880001	chr2R_7880001	0.50	ISO1-AS-LSg123
71	chr2R	7954376	7954501	roo	403	8664	185	125	'90-95	69.09	42.4	4.3	intron	CG14764 -	chr2R_185_7950001	chr2R_7950001	0.49	ISO1-AS-LSg123
72	chr2R	8528852	8528902	mdg1	31	31	4	50	'3-1	75.25	53.2	0.1	intron	mtt -	chr2R_4_8525001	chr2R_8525001	0.75	ISO1-AS-LSg123
73	chr2R	8528860	8528982	I-element	5350	200	160	122	'66-94	66.32	41.9	3.7	intron	mtt -	chr2R_160_8525001	chr2R_8525001	0.41	ISO1-AS-LSg123
74	chr2R	8651981	8652024	F-element	50	14	23	43	'12-11	60.53	76.1	0.3	intron	ptc +	chr2R_23_8650001	chr2R_8650001	0.52	ISO1-AS-LSg123
75	chr2R	8745505	8745548	F-element	64	21	9	43	'7-2	64.07	87.9	0.1	intron	CG8740 +	chr2R_9_8745001	chr2R_8745001	0.78	ISO1-AS-LSg123
76	chr2R	9009410	9009541	roo	8666	410	170	131	'84-86	66.59	37.9	4.4	intron	CG8172 -	chr2R_170_9005001	chr2R_9005001	0.49	ISO1-AS-LSg123
77	chr2R	9016514	9016649	Tirant	401	8108	184	135	'97-87	66.86	36.8	4.9	exon	CG13744 -	chr2R_184_9015001	chr2R_9015001	0.53	ISO1-AS-LSg123
78	chr2R	9789935	9790063	HMS-Beagle	243	6797	22	128	'7-15	67.97	53.1	0.4	intron,5` UTR	CG1688 -,CR44208 +	chr2R_22_9785001	chr2R_9785001	0.32	ISO1-AS-LSg123
79	chr2R	10044679	10044792	FB	9	5	22	113	'13-9	65.12	58.4	0.4	intron,5` UTR	oys -,CR44295 +	chr2R_22_10040001	chr2R_10040001	0.59	ISO1-AS-LSg123
80	chr2R	10355614	10355743	copia	255	1	6	129	'1-5	66.33	57.1	0.1	intron,5` UTR,exon	CG42732 -,CG12902 -,CG43397 -	chr2R_6_10355001	chr2R_10355001	0.17	ISO1-AS-LSg123
81	chr2R	10977570	10977618	F-element	15	63	5	48	'3-2	64.80	81.1	0.1	intergenic	not near genes	chr2R_5_10975001	chr2R_10975001	0.60	ISO1-AS-LSg123
82	chr2R	11159198	11159326	hobo	2708	3	61	128	'35-26	64.73	53.2	1.1	intron,5` UTR	CG13229 -,shn +	chr2R_61_11155001	chr2R_11155001	0.57	ISO1-AS-LSg123
83	chr2R	11223455	11223566	Tirant	10	8494	13	111	'5-8	68.01	63.9	0.2	intron	CG7737 +	chr2R_13_11220001	chr2R_11220001	0.38	ISO1-AS-LSg123
84	chr2R	11523697	11523746	F-element	62	13	83	49	'40-43	62.22	64.4	1.3	intergenic	en -	chr2R_83_11520001	chr2R_11520001	0.48	ISO1-AS-LSg123
85	chr2R	11910851	11910973	roo	407	7	19	122	'12-7	66.47	58.3	0.3	intron	CG13183 -	chr2R_19_11910001	chr2R_11910001	0.63	ISO1-AS-LSg123
86	chr2R	11948378	11948471	297	6957	21	4	93	'3-1	62.75	66.4	0.1	intron	CG13188 +	chr2R_4_11945001	chr2R_11945001	0.75	ISO1-AS-LSg123
87	chr2R	12645271	12645574	copia	4896	1	55	303	'1-54	66.39	52.8	1.0	intron	CG8785 -	chr2R_55_12645001	chr2R_12645001	0.02	ISO1-AS-LSg123
88	chr2R	12778084	12778201	roo	8675	407	17	117	'7-10	65.00	56.7	0.3	5` UTR	CR45266 +	chr2R_17_12775001	chr2R_12775001	0.41	ISO1-AS-LSg123
89	chr2R	13586609	13586661	F-element	9	27	80	52	'40-40	63.69	49.9	1.6	intron,intron	CG6191 -,CG45088 -	chr2R_80_13585001	chr2R_13585001	0.50	ISO1-AS-LSg123
90	chr2R	14013784	14013843	Doc	1	60	103	59	'61-42	66.47	45.9	2.2	intron	mam +	chr2R_103_14010001	chr2R_14010001	0.59	ISO1-AS-LSg123
91	chr2R	14372404	14372529	hobo	2937	1	133	125	'62-71	67.10	40.4	3.2	intron,intron	Obp50b +,Obp50c +	chr2R_133_14370001	chr2R_14370001	0.47	ISO1-AS-LSg123
92	chr2R	14761176	14761208	F-element	64	32	4	32	'3-1	67.25	82.5	0.0	3` UTR	Spred -	chr2R_4_14760001	chr2R_14760001	0.75	ISO1-AS-LSg123
93	chr2R	15475458	15475543	copia	255	42	84	85	'59-25	66.79	39.4	2.1	intron	CG8180 -	chr2R_84_15475001	chr2R_15475001	0.70	ISO1-AS-LSg123
94	chr2R	15809271	15809380	roo	9062	12	5	109	'2-3	60.70	60.2	0.1	intron,intron	Zasp52 -,tun +	chr2R_5_15805001	chr2R_15805001	0.40	ISO1-AS-LSg123
95	chr2R	15917848	15917971	FB	3	1	150	123	'67-83	64.33	48.1	3.1	intron	sli -	chr2R_150_15915001	chr2R_15915001	0.45	ISO1-AS-LSg123
96	chr2R	16127206	16127331	FB	1	1	160	125	'75-85	65.27	42.8	3.7	intron	spin +	chr2R_160_16125001	chr2R_16125001	0.47	ISO1-AS-LSg123
97	chr2R	16373983	16374104	hobo	2937	5	12	121	'9-3	65.80	53.5	0.2	intergenic	not near genes	chr2R_12_16370001	chr2R_16370001	0.75	ISO1-AS-LSg123
98	chr2R	16979653	16979783	HMS-Beagle	245	6797	170	130	'82-88	65.49	41.7	4.0	intron	Cbp53E +	chr2R_170_16975001	chr2R_16975001	0.48	ISO1-AS-LSg123
99	chr2R	17109975	17110096	diver	220	5	38	121	'19-19	62.95	61.1	0.6	exon	CG15611 +	chr2R_38_17105001	chr2R_17105001	0.50	ISO1-AS-LSg123
100	chr2R	17459760	17459884	FB	2	1	151	124	'85-66	64.52	20.7	7.0	intron	CG14478 +	chr2R_151_17455001	chr2R_17455001	0.56	ISO1-AS-LSg123
101	chr2R	17485070	17485110	F-element	22	62	7	40	'2-5	69.49	85.7	0.1	5` UTR,5` UTR	CG43110 -,NT5E-2 +	chr2R_7_17485001	chr2R_17485001	0.29	ISO1-AS-LSg123
102	chr2R	18763883	18764014	diver	5888	225	33	131	'12-21	67.92	61.2	0.5	intron	Mctp +	chr2R_33_18760001	chr2R_18760001	0.36	ISO1-AS-LSg123
103	chr2R	19181733	19181818	FB	12	30	10	85	'4-6	66.05	78.0	0.1	intron	hppy +	chr2R_10_19180001	chr2R_19180001	0.40	ISO1-AS-LSg123
104	chr2R	19257486	19257598	Tirant	393	16	22	112	'13-9	66.19	56.6	0.4	intergenic	not near genes	chr2R_22_19255001	chr2R_19255001	0.59	ISO1-AS-LSg123
105	chr2R	19292736	19292835	diver	196	3	19	99	'9-10	68.81	64.6	0.3	5` UTR	Tab2 +	chr2R_19_19290001	chr2R_19290001	0.47	ISO1-AS-LSg123
106	chr2R	19394592	19394718	copia	4867	249	23	126	'12-11	66.04	56.1	0.4	intron	SdhA -	chr2R_23_19390001	chr2R_19390001	0.52	ISO1-AS-LSg123
107	chr2R	19526896	19527025	hobo	2707	3	21	129	'4-17	67.62	55.5	0.4	3` UTR	sm -	chr2R_21_19525001	chr2R_19525001	0.19	ISO1-AS-LSg123
108	chr2R	19768190	19768311	copia	246	4869	16	121	'7-9	63.36	53.3	0.3	intergenic	not near genes	chr2R_16_19765001	chr2R_19765001	0.44	ISO1-AS-LSg123
109	chr2R	19792367	19792490	Tirant	389	8108	24	123	'15-9	63.93	48.9	0.5	intergenic	not near genes	chr2R_24_19790001	chr2R_19790001	0.62	ISO1-AS-LSg123
110	chr2R	20087367	20087472	FB	3	19	14	105	'10-4	66.50	51.1	0.3	intergenic	not near genes	chr2R_14_20085001	chr2R_20085001	0.71	ISO1-AS-LSg123
111	chr2R	20885366	20885459	copia	241	23	11	93	'4-7	61.34	59.8	0.2	exon	otp -	chr2R_11_20885001	chr2R_20885001	0.36	ISO1-AS-LSg123
112	chr2R	21111993	21112046	Doc	1	54	97	53	'47-50	64.51	50.0	1.9	intron	ktub +	chr2R_97_21110001	chr2R_21110001	0.48	ISO1-AS-LSg123
113	chr2R	21463382	21463504	hobo	2935	2	63	122	'18-45	65.19	47.9	1.3	intron	Sdc -	chr2R_63_21460001	chr2R_21460001	0.29	ISO1-AS-LSg123
114	chr2R	22453355	22453480	hobo	2	2938	157	125	'76-81	66.31	43.1	3.6	intergenic	not near genes	chr2R_157_22450001	chr2R_22450001	0.48	ISO1-AS-LSg123
115	chr2R	22680020	22680098	HMS-Beagle	6995	2	73	78	'18-55	66.42	37.4	1.9	intergenic	not near genes	chr2R_73_22680001	chr2R_22680001	0.25	ISO1-AS-LSg123
116	chr2R	22786249	22786442	hobo	2938	2	159	193	'105-54	65.15	34.3	4.5	intron	CG42260 -	chr2R_159_22785001	chr2R_22785001	0.66	ISO1-AS-LSg123
117	chr2R	23674000	23674114	hobo	3	2928	18	114	'16-2	67.49	54.2	0.3	intron	Pde8 +	chr2R_18_23670001	chr2R_23670001	0.89	ISO1-AS-LSg123
118	chr2R	24339163	24339205	FB	5	47	5	42	'3-2	68.53	79.7	0.1	intergenic	not near genes	chr2R_5_24335001	chr2R_24335001	0.60	ISO1-AS-LSg123
119	chr2R	24340361	24340468	FB	13	7	20	107	'9-11	65.59	54.2	0.4	intergenic	not near genes	chr2R_20_24340001	chr2R_24340001	0.45	ISO1-AS-LSg123
120	chr3L	128156	128274	copia	5	248	126	118	'69-57	65.86	51.9	2.4	intergenic	CR45400 -	chr3L_126_125001	chr3L_125001	0.55	ISO1-AS-LSg123
121	chr3L	538267	538295	FB	24	52	4	28	'2-2	62.00	118.8	0.0	intron	klar -	chr3L_4_535001	chr3L_535001	0.50	ISO1-AS-LSg123
122	chr3L	796736	796831	FB	12	20	11	95	'8-3	67.44	65.3	0.2	intergenic	not near genes	chr3L_11_795001	chr3L_795001	0.73	ISO1-AS-LSg123
123	chr3L	798967	799074	roo	6	9054	10	107	'5-5	70.11	61.1	0.2	intergenic	not near genes	chr3L_10_795001	chr3L_795001	0.50	ISO1-AS-LSg123
124	chr3L	814087	814214	roo	407	2	32	127	'12-20	65.78	56.9	0.6	5` UTR	CR44537 +	chr3L_32_810001	chr3L_810001	0.38	ISO1-AS-LSg123
125	chr3L	969643	969763	hobo	1	2932	133	120	'77-56	66.31	45.7	2.8	intron	Glut1 +	chr3L_133_965001	chr3L_965001	0.58	ISO1-AS-LSg123
126	chr3L	2162699	2162819	I-element	1	5350	148	120	'71-77	65.60	44.1	3.3	intron	CG15822 -	chr3L_148_2160001	chr3L_2160001	0.48	ISO1-AS-LSg123
127	chr3L	2390201	2390310	HMS-Beagle	22	7041	10	109	'3-7	65.58	72.4	0.1	intron,intron,intron	CG45186 +,CG32298 -,CG32299 -	chr3L_10_2390001	chr3L_2390001	0.30	ISO1-AS-LSg123
128	chr3L	2717570	2717702	roo	409	8663	218	132	'119-99	68.01	39.9	5.3	intergenic	Mrtf -	chr3L_218_2715001	chr3L_2715001	0.55	ISO1-AS-LSg123
129	chr3L	3026611	3026701	copia	255	40	26	90	'15-11	72.76	43.0	0.6	intergenic	aly -	chr3L_26_3025001	chr3L_3025001	0.58	ISO1-AS-LSg123
130	chr3L	3616906	3617030	copia	257	4877	8	124	'5-3	69.25	57.7	0.1	intergenic	CG10357 +	chr3L_8_3615001	chr3L_3615001	0.62	ISO1-AS-LSg123
131	chr3L	3739541	3739672	roo	8664	409	188	131	'82-106	68.16	42.9	4.3	intron	CG32264 -	chr3L_188_3735001	chr3L_3735001	0.44	ISO1-AS-LSg123
132	chr3L	4056064	4056195	copia	4869	256	70	131	'40-30	68.00	56.8	1.2	intron	CG1136 +	chr3L_70_4055001	chr3L_4055001	0.57	ISO1-AS-LSg123
133	chr3L	4390335	4390467	roo	8662	408	205	132	'104-101	68.25	44.6	4.5	intron	slow +	chr3L_205_4390001	chr3L_4390001	0.51	ISO1-AS-LSg123
134	chr3L	4577604	4577732	hobo	2	2709	22	128	'7-15	65.05	55.5	0.4	intron	CG42540 +	chr3L_22_4575001	chr3L_4575001	0.32	ISO1-AS-LSg123
135	chr3L	5177384	5177485	FB	12	14	8	101	'3-5	63.93	53.2	0.1	intron	shep -	chr3L_8_5175001	chr3L_5175001	0.38	ISO1-AS-LSg123
136	chr3L	6051843	6051958	hobo	2934	8	14	115	'4-10	68.79	65.7	0.2	intergenic	Jon65Aiii +,Jon65Aii +	chr3L_14_6050001	chr3L_6050001	0.29	ISO1-AS-LSg123
137	chr3L	7262815	7262916	297	6948	4	5	101	'3-2	68.12	63.2	0.1	intron	CG14830 -	chr3L_5_7260001	chr3L_7260001	0.60	ISO1-AS-LSg123
138	chr3L	7394511	7394645	roo	410	8662	142	134	'79-63	67.94	43.4	3.2	intron	CG8563 +	chr3L_142_7390001	chr3L_7390001	0.56	ISO1-AS-LSg123
139	chr3L	7606427	7606474	FB	53	27	5	47	'2-3	63.79	56.0	0.1	intron	CG33275 +	chr3L_5_7605001	chr3L_7605001	0.40	ISO1-AS-LSg123
140	chr3L	7967882	7968002	hobo	6	2937	26	120	'12-14	62.40	57.9	0.4	intergenic	not near genes	chr3L_26_7965001	chr3L_7965001	0.46	ISO1-AS-LSg123
141	chr3L	8052094	8052208	copia	249	10	14	114	'5-9	65.29	66.9	0.2	3` UTR	nmo +	chr3L_14_8050001	chr3L_8050001	0.36	ISO1-AS-LSg123
142	chr3L	9290540	9290664	hobo	1	2938	133	124	'72-61	64.26	29.9	4.3	intergenic	not near genes	chr3L_133_9290001	chr3L_9290001	0.54	ISO1-AS-LSg123
143	chr3L	9571611	9571731	copia	4	249	25	120	'16-9	66.91	60.8	0.4	intron	CG42673 +	chr3L_25_9570001	chr3L_9570001	0.64	ISO1-AS-LSg123
144	chr3L	10055713	10055835	hobo	4	2937	86	122	'47-39	67.07	24.7	3.3	intron	dpr6 +	chr3L_86_10055001	chr3L_10055001	0.55	ISO1-AS-LSg123
145	chr3L	10109601	10109703	copia	252	25	13	102	'6-7	65.86	39.8	0.3	intron	dpr6 +	chr3L_13_10105001	chr3L_10105001	0.46	ISO1-AS-LSg123
146	chr3L	10430779	10430894	roo	14	407	6	115	'1-5	69.17	61.9	0.1	exon	Ir67b -	chr3L_6_10430001	chr3L_10430001	0.17	ISO1-AS-LSg123
147	chr3L	10543314	10543409	FB	3	29	56	95	'37-19	64.77	50.7	1.1	intron	A2bp1 +	chr3L_56_10540001	chr3L_10540001	0.66	ISO1-AS-LSg123
148	chr3L	11620816	11620941	FB	1	1	170	125	'74-96	64.27	44.6	3.7	intron	CG6084 -	chr3L_170_11620001	chr3L_11620001	0.44	ISO1-AS-LSg123
149	chr3L	12035579	12035704	copia	4868	249	20	125	'13-7	67.09	43.5	0.4	intron	rols -	chr3L_20_12035001	chr3L_12035001	0.65	ISO1-AS-LSg123
150	chr3L	12049643	12049759	copia	251	4879	25	116	'17-8	68.22	63.3	0.4	intron	rols -	chr3L_25_12045001	chr3L_12045001	0.68	ISO1-AS-LSg123
151	chr3L	12124218	12124302	Tirant	399	8156	15	84	'14-1	67.08	62.2	0.2	intron	yps -	chr3L_15_12120001	chr3L_12120001	0.93	ISO1-AS-LSg123
152	chr3L	12357744	12357867	roo	404	2	58	123	'33-25	66.27	63.6	0.9	intergenic	not near genes	chr3L_58_12355001	chr3L_12355001	0.57	ISO1-AS-LSg123
153	chr3L	13539668	13539737	hobo	16	2896	5	69	'3-2	71.75	60.9	0.1	intron	bru-3 -	chr3L_5_13535001	chr3L_13535001	0.60	ISO1-AS-LSg123
154	chr3L	13613610	13613675	hobo	2923	47	9	65	'4-5	72.02	27.0	0.3	intron	bru-3 -	chr3L_9_13610001	chr3L_13610001	0.44	ISO1-AS-LSg123
155	chr3L	14597599	14597725	hobo	2938	1	139	126	'71-68	65.61	43.8	3.1	intron	HGTX -	chr3L_139_14595001	chr3L_14595001	0.51	ISO1-AS-LSg123
156	chr3L	15347539	15347665	hobo	1	2938	66	126	'27-39	62.90	15.7	4.0	intergenic	not near genes	chr3L_66_15345001	chr3L_15345001	0.41	ISO1-AS-LSg123
157	chr3L	15713437	15713557	roo	406	8672	26	120	'11-15	63.78	58.0	0.4	intergenic	not near genes	chr3L_26_15710001	chr3L_15710001	0.42	ISO1-AS-LSg123
158	chr3L	16002225	16002350	FB	1	1	184	125	'82-102	65.86	44.7	4.0	intron	CG5830 -	chr3L_184_16000001	chr3L_16000001	0.45	ISO1-AS-LSg123
159	chr3L	16055227	16055352	FB	146	3	29	125	'21-8	65.40	54.3	0.5	intron	Mbs +	chr3L_29_16055001	chr3L_16055001	0.72	ISO1-AS-LSg123
160	chr3L	16055302	16055422	Tirant	1	386	9	120	'2-7	63.78	53.0	0.2	intron	Mbs +	chr3L_9_16055001	chr3L_16055001	0.22	ISO1-AS-LSg123
161	chr3L	17004543	17004666	FB	2	2	103	123	'51-52	65.10	50.8	2.0	intron	CG3764 -	chr3L_103_17000001	chr3L_17000001	0.50	ISO1-AS-LSg123
162	chr3L	17150148	17150275	hobo	2710	2	101	127	'59-42	64.54	32.9	3.0	intron	Rbp6 -	chr3L_101_17150001	chr3L_17150001	0.58	ISO1-AS-LSg123
163	chr3L	17446284	17446409	hobo	2937	3	54	125	'51-3	65.75	48.1	1.1	intron	CG18265 +	chr3L_54_17445001	chr3L_17445001	0.94	ISO1-AS-LSg123
164	chr3L	17605235	17605347	copia	7	244	7	112	'5-2	67.76	58.2	0.1	intron	Eip74EF -	chr3L_7_17605001	chr3L_17605001	0.71	ISO1-AS-LSg123
165	chr3L	18645639	18645737	Doc	58	141	97	98	'87-10	65.82	41.2	2.3	intron	MYPT-75D +	chr3L_97_18645001	chr3L_18645001	0.90	ISO1-AS-LSg123
166	chr3L	18811326	18811454	roo	411	5	25	128	'16-9	67.79	56.2	0.4	intron	CG14073 -	chr3L_25_18810001	chr3L_18810001	0.64	ISO1-AS-LSg123
167	chr3L	19873035	19873083	Doc	4680	4628	20	48	'15-5	66.58	93.5	0.2	intron	CG8334 +	chr3L_20_19870001	chr3L_19870001	0.75	ISO1-AS-LSg123
168	chr3L	19876837	19876959	roo	400	8664	108	122	'40-68	68.71	55.4	1.9	exon	CG8334 +	chr3L_108_19875001	chr3L_19875001	0.37	ISO1-AS-LSg123
169	chr3L	21115989	21116105	I-element	5350	1	173	116	'80-93	62.48	43.6	3.9	intron	ko -	chr3L_173_21115001	chr3L_21115001	0.46	ISO1-AS-LSg123
170	chr3L	21242732	21242776	Doc	45	1	19	44	'9-10	65.84	83.0	0.2	intron	Eip78C +	chr3L_19_21240001	chr3L_21240001	0.47	ISO1-AS-LSg123
171	chr3L	22359653	22359710	Doc	3	60	101	57	'50-51	66.41	47.2	2.1	intron	Ten-m -	chr3L_101_22355001	chr3L_22355001	0.50	ISO1-AS-LSg123
172	chr3L	22508979	22509109	diver	224	5888	123	130	'52-71	65.18	28.9	4.1	intergenic	not near genes	chr3L_123_22505001	chr3L_22505001	0.42	ISO1-AS-LSg123
173	chr3L	22773029	22773155	hobo	1	2938	93	126	'42-51	65.26	49.3	1.8	intron	SPoCk +	chr3L_93_22770001	chr3L_22770001	0.45	ISO1-AS-LSg123
174	chr3L	27716627	27716674	Doc	57	10	24	47	'12-12	56.73	16.3	1.4	intergenic	not near genes	chr3L_24_27715001	chr3L_27715001	0.50	ISO1-AS-LSg123
175	chr3R	1955047	1955081	F-element	16	50	4	34	'1-3	57.75	2.1	1.3	intergenic	not near genes	chr3R_4_1955001	chr3R_1955001	0.25	ISO1-AS-LSg123
176	chr3R	5066591	5066726	Tirant	402	8109	190	135	'114-76	67.68	36.6	5.1	intergenic	not near genes	chr3R_190_5065001	chr3R_5065001	0.60	ISO1-AS-LSg123
177	chr3R	6171760	6171878	I-element	1	5350	146	118	'76-70	63.54	38.7	3.7	intergenic	not near genes	chr3R_146_6170001	chr3R_6170001	0.52	ISO1-AS-LSg123
178	chr3R	6171844	6171886	mdg1	7064	31	4	42	'1-3	77.55	44.3	0.1	intergenic	not near genes	chr3R_4_6170001	chr3R_6170001	0.25	ISO1-AS-LSg123
179	chr3R	6903826	6903956	roo	8666	410	170	130	'72-98	66.29	37.8	4.4	intron,3` UTR	Antp -,CR43252 -	chr3R_170_6900001	chr3R_6900001	0.42	ISO1-AS-LSg123
180	chr3R	6959745	6959859	I-element	5350	3	100	114	'50-50	66.92	32.7	3.0	intron	Antp -	chr3R_100_6955001	chr3R_6955001	0.50	ISO1-AS-LSg123
181	chr3R	7718047	7718175	roo	405	8663	117	128	'61-56	67.74	46.4	2.5	intergenic	not near genes	chr3R_117_7715001	chr3R_7715001	0.52	ISO1-AS-LSg123
182	chr3R	8359010	8359073	FB	36	13	6	63	'4-2	70.54	70.2	0.1	exon	stck +	chr3R_6_8355001	chr3R_8355001	0.67	ISO1-AS-LSg123
183	chr3R	8624317	8624448	roo	8664	409	188	131	'97-91	65.78	43.1	4.3	intron	5-HT2B +	chr3R_188_8620001	chr3R_8620001	0.52	ISO1-AS-LSg123
184	chr3R	9798047	9798099	Doc	2	54	102	52	'43-59	63.31	53.9	1.9	3` UTR	CG9467 -	chr3R_102_9795001	chr3R_9795001	0.42	ISO1-AS-LSg123
185	chr3R	10168989	10169094	copia	3	235	22	105	'16-6	64.11	55.3	0.4	intron	Best1 -	chr3R_22_10165001	chr3R_10165001	0.73	ISO1-AS-LSg123
186	chr3R	10541172	10541264	hobo	2	2905	77	92	'51-26	66.66	27.1	2.7	intron	hth -	chr3R_77_10540001	chr3R_10540001	0.66	ISO1-AS-LSg123
187	chr3R	12230699	12230816	roo	397	8666	20	117	'9-11	68.75	57.4	0.3	intergenic	CG3916 +	chr3R_20_12230001	chr3R_12230001	0.45	ISO1-AS-LSg123
188	chr3R	13104798	13104916	copia	4876	250	13	118	'6-7	70.15	58.6	0.2	intron	timeout +	chr3R_13_13100001	chr3R_13100001	0.46	ISO1-AS-LSg123
189	chr3R	13159800	13159867	copia	203	4880	4	67	'1-3	65.75	73.1	0.1	intron	timeout +	chr3R_4_13155001	chr3R_13155001	0.25	ISO1-AS-LSg123
190	chr3R	13244824	13244935	I-element	8	5349	48	111	'21-27	66.47	58.2	0.8	intron	Ace -	chr3R_48_13240001	chr3R_13240001	0.44	ISO1-AS-LSg123
191	chr3R	13724464	13724585	hobo	2938	1	26	121	'12-14	67.94	59.7	0.4	intron	CG34383 +	chr3R_26_13720001	chr3R_13720001	0.46	ISO1-AS-LSg123
192	chr3R	14720810	14720935	FB	1	1	151	125	'68-83	65.63	38.1	3.9	intron	kibra -	chr3R_151_14720001	chr3R_14720001	0.45	ISO1-AS-LSg123
193	chr3R	15224923	15225032	FB	11	7	22	109	'10-12	67.03	59.1	0.4	exon	CG31344 -	chr3R_22_15220001	chr3R_15220001	0.45	ISO1-AS-LSg123
194	chr3R	15756288	15756413	hobo	2	2938	144	125	'57-87	66.15	35.8	3.9	intergenic	not near genes	chr3R_144_15755001	chr3R_15755001	0.40	ISO1-AS-LSg123
195	chr3R	16133934	16134046	I-element	2	5350	159	112	'79-80	67.60	42.8	3.6	intron	Sb +	chr3R_159_16130001	chr3R_16130001	0.50	ISO1-AS-LSg123
196	chr3R	16231578	16231611	F-element	160	193	59	33	'28-31	59.74	73.9	0.8	intron	tara +	chr3R_59_16230001	chr3R_16230001	0.47	ISO1-AS-LSg123
197	chr3R	16281324	16281400	FB	38	13	7	76	'1-6	62.89	77.2	0.1	intron	gish +	chr3R_7_16280001	chr3R_16280001	0.14	ISO1-AS-LSg123
198	chr3R	18330807	18330921	I-element	354	5350	31	114	'17-14	62.05	51.8	0.6	intergenic	CG15803 -	chr3R_31_18330001	chr3R_18330001	0.55	ISO1-AS-LSg123
199	chr3R	18440682	18440847	FB	7	3	26	165	'15-11	63.58	48.2	0.5	intron	fru -	chr3R_26_18440001	chr3R_18440001	0.58	ISO1-AS-LSg123
200	chr3R	18731422	18731536	hobo	3	2928	24	114	'13-11	66.03	60.7	0.4	3` UTR	Cha +	chr3R_24_18730001	chr3R_18730001	0.54	ISO1-AS-LSg123
201	chr3R	19503187	19503328	hobo	2	2	148	141	'72-76	65.52	40.1	3.6	intron	Dys +	chr3R_148_19500001	chr3R_19500001	0.49	ISO1-AS-LSg123
202	chr3R	19564220	19564333	I-element	2	5350	156	113	'89-67	63.80	45.1	3.4	intron	Dys +	chr3R_156_19560001	chr3R_19560001	0.57	ISO1-AS-LSg123
203	chr3R	19564292	19564340	mdg1	31	7077	7	48	'2-5	73.45	54.1	0.1	intron	Dys +	chr3R_7_19560001	chr3R_19560001	0.29	ISO1-AS-LSg123
204	chr3R	20325948	20326033	FB	5	37	5	85	'4-1	66.40	66.1	0.1	3` UTR	CG4360 -	chr3R_5_20325001	chr3R_20325001	0.80	ISO1-AS-LSg123
205	chr3R	20815066	20815113	Doc	1	48	80	47	'42-38	56.13	50.3	1.6	exon	Fancd2 -	chr3R_80_20815001	chr3R_20815001	0.53	ISO1-AS-LSg123
206	chr3R	21091073	21091138	FB	16	46	6	65	'5-1	63.72	77.3	0.1	intron,intron	RhoGAP93B -,CR44178 +	chr3R_6_21090001	chr3R_21090001	0.83	ISO1-AS-LSg123
207	chr3R	21481698	21481829	hobo	2707	1	162	131	'89-73	67.05	41.6	3.8	intergenic	not near genes	chr3R_162_21480001	chr3R_21480001	0.55	ISO1-AS-LSg123
208	chr3R	21616922	21616975	Tirant	347	400	82	53	'48-34	64.35	54.2	1.5	intron	InR -	chr3R_82_21615001	chr3R_21615001	0.59	ISO1-AS-LSg123
209	chr3R	21629871	21629974	hobo	24	2938	64	103	'25-39	67.07	45.1	1.4	intron	E2f -	chr3R_64_21625001	chr3R_21625001	0.39	ISO1-AS-LSg123
210	chr3R	21809758	21809816	Doc	211	269	89	58	'41-48	62.76	47.7	1.8	intron	CASK -	chr3R_89_21805001	chr3R_21805001	0.46	ISO1-AS-LSg123
211	chr3R	21863135	21863256	copia	5	251	70	121	'33-37	65.86	53.8	1.3	intergenic	not near genes	chr3R_70_21860001	chr3R_21860001	0.47	ISO1-AS-LSg123
212	chr3R	22061466	22061586	FB	3	4	78	120	'45-33	64.77	58.9	1.3	intron	how +	chr3R_78_22060001	chr3R_22060001	0.58	ISO1-AS-LSg123
213	chr3R	22469066	22469193	hobo	3	2709	150	127	'70-80	66.08	40.3	3.6	intergenic	Nrx-1 +	chr3R_150_22465001	chr3R_22465001	0.47	ISO1-AS-LSg123
214	chr3R	22590789	22590822	Doc	34	1	66	33	'32-34	46.45	58.9	1.1	intron	Efa6 +	chr3R_66_22590001	chr3R_22590001	0.48	ISO1-AS-LSg123
215	chr3R	23390846	23390893	mdg1	7076	7075	9	47	'7-2	74.98	51.1	0.2	intergenic	CR43387 +	chr3R_9_23390001	chr3R_23390001	0.78	ISO1-AS-LSg123
216	chr3R	23390852	23390968	I-element	5350	2	133	116	'69-64	67.14	40.1	3.2	intergenic	CR43387 +	chr3R_133_23390001	chr3R_23390001	0.52	ISO1-AS-LSg123
217	chr3R	23601286	23601400	hobo	2928	3	22	114	'13-9	64.74	55.8	0.4	intergenic	not near genes	chr3R_22_23600001	chr3R_23600001	0.59	ISO1-AS-LSg123
218	chr3R	23784896	23785015	copia	256	12	6	119	'4-2	69.33	58.3	0.1	intron	mbc +	chr3R_6_23780001	chr3R_23780001	0.67	ISO1-AS-LSg123
219	chr3R	23887743	23887786	FB	8	51	5	43	'3-2	64.40	82.4	0.1	intron	Pli -	chr3R_5_23885001	chr3R_23885001	0.60	ISO1-AS-LSg123
220	chr3R	24606898	24607022	hobo	2938	3	33	124	'15-18	64.62	56.7	0.6	intron	mld +	chr3R_33_24605001	chr3R_24605001	0.45	ISO1-AS-LSg123
221	chr3R	24684602	24684938	hobo	2938	1	144	336	'70-74	65.87	16.9	8.0	intron	slo +	chr3R_144_24680001	chr3R_24680001	0.49	ISO1-AS-LSg123
222	chr3R	24865966	24866023	Doc	109	59	94	57	'53-41	66.70	44.8	2.1	intron	Ela +	chr3R_94_24865001	chr3R_24865001	0.56	ISO1-AS-LSg123
223	chr3R	25052576	25052691	FB	6	6	28	115	'16-12	64.14	65.9	0.4	exon	CG11791 +	chr3R_28_25050001	chr3R_25050001	0.57	ISO1-AS-LSg123
224	chr3R	25368244	25368369	hobo	2938	2	147	125	'86-61	65.60	46.4	3.1	intron	Fur1 -	chr3R_147_25365001	chr3R_25365001	0.59	ISO1-AS-LSg123
225	chr3R	25508200	25508301	hobo	3	2915	25	101	'16-9	66.85	67.6	0.4	exon	CG5111 +	chr3R_25_25505001	chr3R_25505001	0.64	ISO1-AS-LSg123
226	chr3R	26047206	26047244	Doc	13	51	5	38	'4-1	59.80	88.9	0.1	exon	gro +	chr3R_5_26045001	chr3R_26045001	0.80	ISO1-AS-LSg123
227	chr3R	26080378	26080475	roo	8697	408	119	97	'39-80	67.11	24.0	4.8	intron	dys -	chr3R_119_26080001	chr3R_26080001	0.33	ISO1-AS-LSg123
228	chr3R	26093356	26093395	F-element	22	61	8	39	'4-4	64.70	87.1	0.1	intron,3` UTR	dys -,CR44319 -	chr3R_8_26090001	chr3R_26090001	0.50	ISO1-AS-LSg123
229	chr3R	26196657	26196687	mdg1	7064	7082	4	30	'3-1	78.53	70.9	0.1	intron	CR44320 +	chr3R_4_26195001	chr3R_26195001	0.75	ISO1-AS-LSg123
230	chr3R	26196663	26196778	I-element	5350	3	166	115	'64-102	65.45	46.4	3.5	intron	CR44320 +	chr3R_166_26195001	chr3R_26195001	0.39	ISO1-AS-LSg123
231	chr3R	26629526	26629577	F-element	13	64	12	51	'6-6	68.15	72.4	0.2	intergenic	TwdlJ +	chr3R_12_26625001	chr3R_26625001	0.50	ISO1-AS-LSg123
232	chr3R	26795535	26795659	hobo	1	2936	143	124	'91-52	65.83	38.8	3.6	intergenic	not near genes	chr3R_143_26795001	chr3R_26795001	0.64	ISO1-AS-LSg123
233	chr3R	27684214	27684264	F-element	9	59	10	50	'6-4	64.87	80.8	0.1	intergenic	not near genes	chr3R_10_27680001	chr3R_27680001	0.60	ISO1-AS-LSg123
234	chr3R	27853119	27853232	hobo	2925	1	9	113	'3-6	65.77	51.6	0.2	intron	CG34353 -	chr3R_9_27850001	chr3R_27850001	0.33	ISO1-AS-LSg123
235	chr3R	28216977	28217033	Doc	60	4	8	56	'4-4	71.50	54.2	0.1	intron	CG34354 +	chr3R_8_28215001	chr3R_28215001	0.50	ISO1-AS-LSg123
236	chr3R	29475678	29475803	hobo	1	2937	143	125	'75-68	64.66	41.1	3.4	intron	Ptp99A +	chr3R_143_29475001	chr3R_29475001	0.52	ISO1-AS-LSg123
237	chr3R	29777196	29777247	F-element	60	9	76	51	'33-43	62.18	7.0	9.5	intron	kay +	chr3R_76_29775001	chr3R_29775001	0.43	ISO1-AS-LSg123
238	chr3R	29930207	29930257	Doc	5	55	14	50	'7-7	63.78	83.6	0.2	exon	CG31202 -	chr3R_14_29930001	chr3R_29930001	0.50	ISO1-AS-LSg123
239	chr3R	30022224	30022311	hobo	40	2938	114	87	'45-69	64.68	45.6	2.4	intergenic	Mgat2 -,RpS28a -	chr3R_114_30020001	chr3R_30020001	0.39	ISO1-AS-LSg123
240	chr3R	30156413	30156450	roo	8663	1	10	37	'3-7	66.07	77.7	0.1	5` UTR	CG11498 -	chr3R_10_30155001	chr3R_30155001	0.30	ISO1-AS-LSg123
241	chr3R	30801192	30801314	FB	4	1	159	122	'76-83	64.74	39.0	4.0	intron	wts -	chr3R_159_30800001	chr3R_30800001	0.48	ISO1-AS-LSg123
242	chr3R	31884578	31884704	hobo	2938	1	125	126	'74-51	64.73	41.1	3.0	intron	heph -	chr3R_125_31880001	chr3R_31880001	0.59	ISO1-AS-LSg123
243	chr3R	31887288	31887411	Tirant	6	8501	34	123	'9-25	64.12	49.2	0.7	intron	heph -	chr3R_34_31885001	chr3R_31885001	0.26	ISO1-AS-LSg123
244	chr4	808054	808186	copia	257	4869	125	132	'61-64	67.25	50.5	2.4	intron	Sox102F -	chr4_125_805001	chr4_805001	0.49	ISO1-AS-LSg123
245	chr4	940323	940376	Doc	6	27	82	53	'40-42	66.24	47.6	1.7	exon	mGluR +	chr4_82_940001	chr4_940001	0.49	ISO1-AS-LSg123
246	chr4	966067	966146	copia	240	4905	4	79	'2-2	67.75	72.2	0.1	intron	fuss -	chr4_4_965001	chr4_965001	0.50	ISO1-AS-LSg123
247	chr4	1219302	1219353	copia	253	253	10	51	'4-6	69.55	105.9	0.1	intron	Mitf +	chr4_10_1215001	chr4_1215001	0.40	ISO1-AS-LSg123
248	chrX	597717	597847	copia	258	4872	64	130	'35-29	69.38	38.6	1.6	3` UTR,intron	vnd +,CG13366 -	chrX_64_595001	chrX_595001	0.55	ISO1-AS-LSg123
249	chrX	691378	691501	FB	1	3	132	123	'69-63	63.87	35.9	3.6	intron	sdk +	chrX_132_690001	chrX_690001	0.52	ISO1-AS-LSg123
250	chrX	861778	861829	Doc	56	5	18	51	'10-8	65.94	72.2	0.2	intron	CG43867 -	chrX_18_860001	chrX_860001	0.56	ISO1-AS-LSg123
251	chrX	1123809	1123845	FB	40	4	39	36	'21-18	62.90	65.4	0.6	intron	CG3655 -	chrX_39_1120001	chrX_1120001	0.54	ISO1-AS-LSg123
252	chrX	1579421	1579526	copia	256	4895	105	105	'68-37	66.99	52.2	2.0	intron,intron	Mur2B -,br +	chrX_105_1575001	chrX_1575001	0.65	ISO1-AS-LSg123
253	chrX	1599976	1600026	hobo	2905	2935	7	50	'6-1	65.86	53.2	0.1	intron,intron	Mur2B -,br +	chrX_7_1595001	chrX_1595001	0.86	ISO1-AS-LSg123
254	chrX	1986165	1986243	I-element	21	5329	18	78	'8-10	61.50	63.6	0.3	intron	Hr4 +	chrX_18_1985001	chrX_1985001	0.44	ISO1-AS-LSg123
255	chrX	2295800	2295867	Tirant	8148	8135	5	67	'2-3	62.80	65.3	0.1	5` UTR	phl +	chrX_5_2295001	chrX_2295001	0.40	ISO1-AS-LSg123
256	chrX	2512388	2512516	copia	2	255	52	128	'24-28	66.68	50.2	1.0	intron	trol -	chrX_52_2510001	chrX_2510001	0.46	ISO1-AS-LSg123
257	chrX	2747813	2747929	FB	3	8	15	116	'7-8	64.44	48.3	0.3	intron	kirre +	chrX_15_2745001	chrX_2745001	0.47	ISO1-AS-LSg123
258	chrX	3378287	3378413	Tirant	8107	391	29	126	'13-16	67.51	56.1	0.5	intron,intron	CR44999 +,dm +	chrX_29_3375001	chrX_3375001	0.45	ISO1-AS-LSg123
259	chrX	3424651	3424783	roo	409	8663	138	132	'65-73	66.34	56.3	2.4	intron,intron	CR44999 +,CG12535 -	chrX_138_3420001	chrX_3420001	0.47	ISO1-AS-LSg123
260	chrX	3562790	3562921	diver	5888	225	173	131	'84-89	66.23	40.1	4.2	intron,intron	CG32791 -,ppk8 +	chrX_173_3560001	chrX_3560001	0.49	ISO1-AS-LSg123
261	chrX	3641511	3641681	diver	11	179	18	170	'13-5	63.67	41.2	0.4	intron	AstA-R1 +	chrX_18_3640001	chrX_3640001	0.72	ISO1-AS-LSg123
262	chrX	4133287	4133339	copia	254	202	15	52	'8-7	65.67	68.5	0.2	3` UTR	Fas2 -	chrX_15_4130001	chrX_4130001	0.53	ISO1-AS-LSg123
263	chrX	4986618	4986746	copia	251	4867	176	128	'100-76	65.91	39.1	4.4	intron	CR44833 -	chrX_176_4985001	chrX_4985001	0.57	ISO1-AS-LSg123
264	chrX	5203766	5203882	roo	399	8669	40	116	'23-17	67.35	55.3	0.7	intron,intron	CG15465 +,rg +	chrX_40_5200001	chrX_5200001	0.57	ISO1-AS-LSg123
265	chrX	5616890	5616948	Doc	5	23	12	58	'9-3	66.20	66.4	0.2	3` UTR	RhoGAP5A -	chrX_12_5615001	chrX_5615001	0.75	ISO1-AS-LSg123
266	chrX	5753730	5753761	Doc	4	35	6	31	'2-4	57.00	81.5	0.1	3` UTR,3` UTR	CG15772 +,lin-52 -	chrX_6_5750001	chrX_5750001	0.33	ISO1-AS-LSg123
267	chrX	5885914	5886044	hobo	2708	1	145	130	'68-77	64.40	40.9	3.5	intron	CR45668 -	chrX_145_5885001	chrX_5885001	0.47	ISO1-AS-LSg123
268	chrX	6542905	6543022	I-element	2	5350	131	117	'76-55	65.51	36.3	3.5	intron	CG34417 +	chrX_131_6540001	chrX_6540001	0.58	ISO1-AS-LSg123
269	chrX	7019562	7019675	roo	401	10	6	113	'2-4	64.67	51.6	0.1	intergenic	not near genes	chrX_6_7015001	chrX_7015001	0.33	ISO1-AS-LSg123
270	chrX	7905272	7905326	Doc	57	3	87	54	'40-47	64.89	48.3	1.8	3` UTR	dpr14 -	chrX_87_7905001	chrX_7905001	0.46	ISO1-AS-LSg123
271	chrX	8516761	8516809	F-element	60	12	11	48	'4-7	66.21	76.3	0.1	3` UTR	CG33181 +	chrX_11_8515001	chrX_8515001	0.36	ISO1-AS-LSg123
272	chrX	8947283	8947324	hobo	2930	2889	10	41	'2-8	64.60	61.6	0.2	intron	rdgA +	chrX_10_8945001	chrX_8945001	0.20	ISO1-AS-LSg123
273	chrX	9205051	9205180	roo	8666	409	164	129	'78-86	69.14	38.4	4.2	intergenic	not near genes	chrX_164_9205001	chrX_9205001	0.48	ISO1-AS-LSg123
274	chrX	9389547	9389673	roo	8664	404	5	126	'3-2	70.00	43.4	0.1	intron	mgl -	chrX_5_9385001	chrX_9385001	0.60	ISO1-AS-LSg123
275	chrX	10089286	10089400	hobo	2927	1	17	114	'9-8	63.73	52.7	0.3	intron	RhoU +	chrX_17_10085001	chrX_10085001	0.53	ISO1-AS-LSg123
276	chrX	10391816	10391937	FB	3	3	81	121	'52-29	64.26	54.2	1.5	intron	flw +	chrX_81_10390001	chrX_10390001	0.64	ISO1-AS-LSg123
277	chrX	10515451	10515581	roo	410	2	166	130	'86-80	68.08	41.3	3.9	intron	spri -	chrX_166_10515001	chrX_10515001	0.52	ISO1-AS-LSg123
278	chrX	10556248	10556305	Doc	1	22	73	57	'28-45	66.22	9.5	7.0	intron	spri -	chrX_73_10555001	chrX_10555001	0.38	ISO1-AS-LSg123
279	chrX	10590984	10591096	hobo	2935	12	22	112	'13-9	65.71	33.3	0.6	3` UTR	Hmr -	chrX_22_10590001	chrX_10590001	0.59	ISO1-AS-LSg123
280	chrX	10641325	10641400	FB	38	14	4	75	'1-3	61.38	61.6	0.1	intron	X11Lbeta +	chrX_4_10640001	chrX_10640001	0.25	ISO1-AS-LSg123
281	chrX	10650283	10650496	FB	2	30	92	213	'80-12	65.48	43.0	2.1	intron	X11Lbeta +	chrX_92_10650001	chrX_10650001	0.87	ISO1-AS-LSg123
282	chrX	10757660	10757783	hobo	3	2937	130	123	'62-68	67.64	34.7	3.6	5` UTR	Rph -	chrX_130_10755001	chrX_10755001	0.48	ISO1-AS-LSg123
283	chrX	10782864	10782974	FB	1	16	60	110	'30-30	62.84	51.7	1.1	intron,intron	Ant2 -,sesB -	chrX_60_10780001	chrX_10780001	0.50	ISO1-AS-LSg123
284	chrX	11500825	11500926	FB	12	13	8	101	'4-4	63.41	56.0	0.1	intron	Drak +	chrX_8_11500001	chrX_11500001	0.50	ISO1-AS-LSg123
285	chrX	11955872	11955925	Doc	55	2	11	53	'7-4	67.63	64.5	0.2	intron	cac -	chrX_11_11955001	chrX_11955001	0.64	ISO1-AS-LSg123
286	chrX	12053599	12053711	FB	10	5	13	112	'5-8	68.77	35.9	0.4	intron,intron	CR43960 +,Ten-a +	chrX_13_12050001	chrX_12050001	0.38	ISO1-AS-LSg123
287	chrX	12433862	12433986	copia	4879	259	16	124	'9-7	66.75	47.6	0.3	intron	Pkcdelta +	chrX_16_12430001	chrX_12430001	0.56	ISO1-AS-LSg123
288	chrX	12437340	12437449	hobo	9	2929	17	109	'9-8	63.71	50.5	0.3	intron	Pkcdelta +	chrX_17_12435001	chrX_12435001	0.53	ISO1-AS-LSg123
289	chrX	12502686	12502809	FB	5	1	125	123	'47-78	65.06	27.8	4.3	intron	CG2556 +	chrX_125_12500001	chrX_12500001	0.38	ISO1-AS-LSg123
290	chrX	12724910	12725035	FB	1	1	124	125	'54-70	63.52	41.9	2.9	intron,intron	Smr -,CR43963 -	chrX_124_12720001	chrX_12720001	0.44	ISO1-AS-LSg123
291	chrX	13159548	13159599	Doc	2	52	77	51	'33-44	64.28	44.6	1.7	intergenic	Bap60 -,CG12096 +	chrX_77_13155001	chrX_13155001	0.43	ISO1-AS-LSg123
292	chrX	13277381	13277449	FB	48	11	14	68	'2-12	62.15	65.7	0.2	intron	HDAC4 -	chrX_14_13275001	chrX_13275001	0.14	ISO1-AS-LSg123
293	chrX	13718618	13718747	HMS-Beagle	1	7040	124	129	'63-61	64.45	37.4	3.2	intergenic	CG9941 -,CG9940 -	chrX_124_13715001	chrX_13715001	0.51	ISO1-AS-LSg123
294	chrX	13786807	13786908	FB	22	4	5	101	'2-3	66.20	61.6	0.1	intron	inaE +	chrX_5_13785001	chrX_13785001	0.40	ISO1-AS-LSg123
295	chrX	13793095	13793218	FB	3	1	69	123	'36-33	66.18	48.9	1.4	intron	inaE +	chrX_69_13790001	chrX_13790001	0.52	ISO1-AS-LSg123
296	chrX	13920928	13921050	roo	76	408	5	122	'1-4	72.40	43.6	0.1	intron	mamo -	chrX_5_13920001	chrX_13920001	0.20	ISO1-AS-LSg123
297	chrX	14007802	14007928	copia	4872	254	41	126	'25-16	64.25	47.7	0.8	intergenic	not near genes	chrX_41_14005001	chrX_14005001	0.61	ISO1-AS-LSg123
298	chrX	14375237	14375308	hobo	2	2884	18	71	'16-2	67.52	21.1	0.8	intron	dpr8 +	chrX_18_14375001	chrX_14375001	0.89	ISO1-AS-LSg123
299	chrX	14620294	14620423	copia	256	4871	103	129	'66-37	68.57	47.2	2.1	intron	NetA -	chrX_103_14620001	chrX_14620001	0.64	ISO1-AS-LSg123
300	chrX	14645075	14645188	hobo	14	2938	12	113	'5-7	64.25	57.4	0.2	intron	NetA -	chrX_12_14645001	chrX_14645001	0.42	ISO1-AS-LSg123
301	chrX	14825727	14825844	Tirant	8126	401	144	117	'52-92	65.76	24.3	5.7	intron	rut -	chrX_144_14825001	chrX_14825001	0.36	ISO1-AS-LSg123
302	chrX	14926869	14926971	hobo	2927	14	8	102	'4-4	67.25	52.5	0.1	exon	Flo2 +	chrX_8_14925001	chrX_14925001	0.50	ISO1-AS-LSg123
303	chrX	14989053	14989133	jockey	8	4968	11	80	'8-3	67.15	61.6	0.2	intron	eag +	chrX_11_14985001	chrX_14985001	0.73	ISO1-AS-LSg123
304	chrX	15089033	15089163	HMS-Beagle	244	6796	102	130	'53-49	65.94	36.3	2.7	intergenic	CG5599 +	chrX_102_15085001	chrX_15085001	0.52	ISO1-AS-LSg123
305	chrX	15405168	15405277	hobo	2933	13	18	109	'13-5	64.89	50.9	0.3	intron	Cngl -	chrX_18_15405001	chrX_15405001	0.72	ISO1-AS-LSg123
306	chrX	15816781	15816936	hobo	2938	2	75	155	'30-45	63.84	31.8	2.3	intron	sd +	chrX_75_15815001	chrX_15815001	0.40	ISO1-AS-LSg123
307	chrX	15933166	15933299	roo	8664	411	188	133	'96-92	67.04	37.9	4.8	exon	Ranbp16 -	chrX_188_15930001	chrX_15930001	0.51	ISO1-AS-LSg123
308	chrX	16515278	16515320	roo	9033	49	47	42	'32-15	73.67	44.9	1.0	intron	para -	chrX_47_16515001	chrX_16515001	0.68	ISO1-AS-LSg123
309	chrX	16686756	16686853	roo	390	15	8	97	'6-2	61.62	56.7	0.1	exon	Sep4 -	chrX_8_16685001	chrX_16685001	0.75	ISO1-AS-LSg123
310	chrX	17062764	17062889	hobo	2708	7	50	125	'46-4	67.66	45.3	1.1	intron	CG45002 -	chrX_50_17060001	chrX_17060001	0.92	ISO1-AS-LSg123
311	chrX	17224951	17225036	copia	4904	245	5	85	'4-1	72.60	60.0	0.1	intergenic	CG10598 -	chrX_5_17220001	chrX_17220001	0.80	ISO1-AS-LSg123
312	chrX	17885439	17885716	FB	14	1	130	277	'1-129	66.29	34.7	3.6	intron	mnb -	chrX_130_17885001	chrX_17885001	0.01	ISO1-AS-LSg123
313	chrX	19018651	19018746	copia	4897	248	9	95	'3-6	66.00	26.1	0.3	intron	CG43759 +	chrX_9_19015001	chrX_19015001	0.33	ISO1-AS-LSg123
314	chrX	19097437	19097556	hobo	2933	2	25	119	'9-16	64.67	48.6	0.5	intergenic	not near genes	chrX_25_19095001	chrX_19095001	0.36	ISO1-AS-LSg123
315	chrX	20120345	20120469	roo	4	406	24	124	'11-13	66.20	49.5	0.5	intergenic	not near genes	chrX_24_20120001	chrX_20120001	0.46	ISO1-AS-LSg123
316	chrX	20448393	20448512	I-element	5350	1	143	119	'68-75	63.50	37.7	3.7	intergenic	not near genes	chrX_143_20445001	chrX_20445001	0.48	ISO1-AS-LSg123
317	chrY	1011631	1011679	I-element	5141	5093	5	48	'4-1	70.29	1.7	1.9	intergenic	not near genes	chrY_5_1010001	chrY_1010001	0.80	ISO1-AS-LSg123