SV#	Chr_5p	Chr_coord_5p_start	Chr_coord_5p_end	Chr_3p	Chr_coord_3p_start	Chr_coord_3p_end	repName	Reads_collapsed	avg_del_len	RefGen_3prime	Refgen_5prime	RefGen_Avg	Coverage_Ratio	size	Chr_5p	Chr_coord_5p	classification_5p	comment_5p	Chr_mid	Chr_coord_mid	classification_mid	comment_mid	Chr_3p	Chr_coord_3p	classification_3p	comment_3p	depletion_code	loci_code	libname
2	chr2L	2100376	2100378	chr2L	2109549	2109554	roo	4	9175	53.0	58.0	55.5	0.1	9178	chr2L	2100376	intron	dpr3 -	chr2L	2104965	intron	dpr3 -	chr2L	2109554	intron	dpr3 -	chr2L_4_2100001	chr2L_2100001	ISO1-AS-LSg123
3	chr2L	2100379	2100383	chr2L	2109542	2109559	roo	10	9172	48.0	50.0	49.0	0.2	9180	chr2L	2100379	intron	dpr3 -	chr2L	2104969	intron	dpr3 -	chr2L	2109559	intron	dpr3 -	chr2L_10_2100001	chr2L_2100001	ISO1-AS-LSg123
4	chr2L	2100384	2100390	chr2L	2109538	2109566	roo	16	9169	41.5	45.0	43.2	0.4	9182	chr2L	2100384	intron	dpr3 -	chr2L	2104975	intron	dpr3 -	chr2L	2109566	intron	dpr3 -	chr2L_16_2100001	chr2L_2100001	ISO1-AS-LSg123
5	chr2L	2100391	2100408	chr2L	2109528	2109552	roo	23	9158	24.5	32.5	28.5	0.8	9161	chr2L	2100391	intron	dpr3 -	chr2L	2104972	intron	dpr3 -	chr2L	2109552	intron	dpr3 -	chr2L_23_2100001	chr2L_2100001	ISO1-AS-LSg123
6	chr2L	2661177	2661188	chr2L	2663037	2663051	I-element	13	1862	54.5	24.0	39.2	0.3	1874	chr2L	2661177	intergenic	not near genes	chr2L	2662114	intergenic	not near genes	chr2L	2663051	intergenic	not near genes	chr2L_13_2660001	chr2L_2660001	ISO1-AS-LSg123
7	chr2L	2661189	2661229	chr2L	2663031	2663042	I-element	59	1855	28.0	20.5	24.2	2.3	1853	chr2L	2661189	intergenic	not near genes	chr2L	2662116	intergenic	not near genes	chr2L	2663042	intergenic	not near genes	chr2L_59_2660001	chr2L_2660001	ISO1-AS-LSg123
8	chr2L	3514737	3514737	chr2L	10242515	10242516	diver	4	6727779	117.5	133.5	125.5	0.0	6727779	chr2L	3514737	intergenic	CG33123 -,CG17593 +	chr2L	6878626	intron	Nlg2 +	chr2L	10242516	3` UTR	chico -	chr2L_4_6875001	chr2L_6875001	ISO1-AS-LSg123
10	chr2L	6876753	6876809	chr2L	6882969	6883023	diver	95	6213	28.0	28.5	28.2	3.3	6270	chr2L	6876753	intron	Nlg2 +	chr2L	6879888	intron	Nlg2 +	chr2L	6883023	intron	Nlg2 +	chr2L_95_6875001	chr2L_6875001	ISO1-AS-LSg123
11	chr2L	7977057	7977112	chr2L	7984052	7984112	297	78	6997	19.0	28.0	23.5	3.2	7055	chr2L	7977057	intron	Snoo -	chr2L	7980584	intron	Snoo -	chr2L	7984112	intron,5` UTR	Snoo -,CG7231 +	chr2L_78_7980001	chr2L_7980001	ISO1-AS-LSg123
14	chr2L	8723091	8723092	chr2L	8731493	8731494	Tirant	4	8402	99.0	31.5	65.2	0.1	8403	chr2L	8723091	intron	raw -	chr2L	8727292	intron	raw -	chr2L	8731494	intron	raw -	chr2L_4_8725001	chr2L_8725001	ISO1-AS-LSg123
15	chr2L	8723093	8723146	chr2L	8731492	8731517	Tirant	99	8400	32.5	30.5	31.5	3.0	8424	chr2L	8723093	intron	raw -	chr2L	8727305	intron	raw -	chr2L	8731517	intron	raw -	chr2L_99_8725001	chr2L_8725001	ISO1-AS-LSg123
18	chr2L	12861671	12861727	chr2L	12863163	12863219	hobo	60	1490	12.5	16.5	14.5	3.9	1548	chr2L	12861671	intergenic	not near genes	chr2L	12862445	intergenic	not near genes	chr2L	12863219	intergenic	not near genes	chr2L_60_12860001	chr2L_12860001	ISO1-AS-LSg123
19	chr2L	12894002	12894049	chr2L	12895494	12895541	hobo	54	1491	14.0	25.5	19.8	2.6	1539	chr2L	12894002	intergenic	not near genes	chr2L	12894772	intergenic	not near genes	chr2L	12895541	intergenic	not near genes	chr2L_54_12890001	chr2L_12890001	ISO1-AS-LSg123
21	chr2L	15956000	15956051	chr2L	15957492	15957543	hobo	60	1491	25.0	34.5	29.8	1.9	1543	chr2L	15956000	intron	beat-Ib -	chr2L	15956772	intron	beat-Ib -	chr2L	15957543	intron	beat-Ib -	chr2L_60_15955001	chr2L_15955001	ISO1-AS-LSg123
22	chr2L	16071771	16071771	chr2L	16217660	16217660	copia	8	145889	23.0	105.5	64.2	0.1	145889	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217660	intergenic	not near genes	chr2L_8_16140001	chr2L_16140001	ISO1-AS-LSg123
23	chr2L	16071771	16071771	chr2L	16217660	16217660	copia	4	145889	23.0	105.5	64.2	0.1	145889	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217660	intergenic	not near genes	chr2L_4_16140001	chr2L_16140001	ISO1-AS-LSg123
25	chr2L	17199138	17199185	chr2L	17200630	17200677	hobo	26	1492	8.0	12.0	10.0	2.4	1539	chr2L	17199138	intron	beat-IIIc -	chr2L	17199908	intron	beat-IIIc -	chr2L	17200677	intron	beat-IIIc -	chr2L_26_17195001	chr2L_17195001	ISO1-AS-LSg123
26	chr2L	17687494	17687516	chr2L	17692264	17692286	F-element	8	4770	6.0	6.5	6.2	1.1	4792	chr2L	17687494	intron	CadN -	chr2L	17689890	intron	CadN -	chr2L	17692286	intron	CadN -	chr2L_8_17685001	chr2L_17685001	ISO1-AS-LSg123
27	chr2L	17727843	17727879	chr2L	17729335	17729367	hobo	11	1491	4.5	12.0	8.2	1.2	1524	chr2L	17727843	intron	CadN -	chr2L	17728605	intron	CadN -	chr2L	17729367	intron	CadN -	chr2L_11_17725001	chr2L_17725001	ISO1-AS-LSg123
28	chr2L	17951921	17951978	chr2L	17953413	17953470	hobo	74	1491	23.0	24.0	23.5	3.0	1549	chr2L	17951921	intergenic	CR44398 -,CR44397 -	chr2L	17952696	intergenic	not near genes	chr2L	17953470	intergenic	not near genes	chr2L_74_17950001	chr2L_17950001	ISO1-AS-LSg123
33	chr2R	1516580	1516603	chr2R	1521333	1521356	1731	51	4752	158.0	122.0	140.0	0.4	4776	chr2R	1516580	exon	Maf1 -	chr2R	1518968	intron	Maf1 -	chr2R	1521356	5` UTR	Maf1 -	chr2R_51_1515001	chr2R_1515001	ISO1-AS-LSg123
35	chr2R	7209845	7209860	chr2R	7217606	7217633	roo	28	7772	41.0	45.0	43.0	0.6	7788	chr2R	7209845	intron	pk +	chr2R	7213739	intron	pk +	chr2R	7217633	intron	pk +	chr2R_28_7210001	chr2R_7210001	ISO1-AS-LSg123
36	chr2R	7209861	7209867	chr2R	7217601	7217640	roo	17	7770	36.0	41.0	38.5	0.4	7779	chr2R	7209861	intron	pk +	chr2R	7213750	intron	pk +	chr2R	7217640	intron	pk +	chr2R_17_7210001	chr2R_7210001	ISO1-AS-LSg123
37	chr2R	7209869	7209872	chr2R	7217597	7217629	roo	10	7764	33.0	37.5	35.2	0.3	7760	chr2R	7209869	intron	pk +	chr2R	7213749	intron	pk +	chr2R	7217629	intron	pk +	chr2R_10_7210001	chr2R_7210001	ISO1-AS-LSg123
38	chr2R	7608384	7608432	chr2R	7613612	7613660	I-element	101	5227	35.5	40.5	38.0	2.6	5276	chr2R	7608384	intron	CG1358 -	chr2R	7611022	intron	CG1358 -	chr2R	7613660	intron	CG1358 -	chr2R_101_7610001	chr2R_7610001	ISO1-AS-LSg123
39	chr2R	7869167	7869209	chr2R	7873978	7874020	Doc	59	4811	34.0	44.0	39.0	1.5	4853	chr2R	7869167	intron	Dgk -	chr2R	7871594	intron	Dgk -	chr2R	7874020	intron	Dgk -	chr2R_59_7870001	chr2R_7870001	ISO1-AS-LSg123
40	chr2R	7869210	7869216	chr2R	7873966	7874027	Doc	6	4790	32.0	31.5	31.8	0.2	4817	chr2R	7869210	intron	Dgk -	chr2R	7871618	intron	Dgk -	chr2R	7874027	intron	Dgk -	chr2R_6_7870001	chr2R_7870001	ISO1-AS-LSg123
41	chr2R	8398186	8398243	chr2R	8402992	8403003	Doc	79	4805	27.5	28.0	27.8	2.7	4817	chr2R	8398186	intron	CG2121 -	chr2R	8400594	intron	CG2121 -	chr2R	8403003	intron	CG2121 -	chr2R_79_8400001	chr2R_8400001	ISO1-AS-LSg123
43	chr2R	10585573	10585586	chr2R	10594181	10594194	Tirant	18	8608	22.0	70.5	46.2	0.4	8621	chr2R	10585573	intron	psq +	chr2R	10589884	intron	psq +	chr2R	10594194	intron	psq +	chr2R_18_10585001	chr2R_10585001	ISO1-AS-LSg123
45	chr2R	13136819	13136822	chr2R	13141642	13141645	Doc	5	4823	86.0	41.5	63.8	0.1	4826	chr2R	13136819	exon	Cap-G +	chr2R	13139232	intron	Cap-G +	chr2R	13141645	intron	Cap-G +	chr2R_5_13135001	chr2R_13135001	ISO1-AS-LSg123
46	chr2R	13136823	13136854	chr2R	13141641	13141677	Doc	53	4822	52.0	41.5	46.8	1.1	4854	chr2R	13136823	exon	Cap-G +	chr2R	13139250	intron	Cap-G +	chr2R	13141677	intron	Cap-G +	chr2R_53_13135001	chr2R_13135001	ISO1-AS-LSg123
47	chr2R	13136855	13136864	chr2R	13141636	13141687	Doc	12	4816	39.0	37.5	38.2	0.3	4832	chr2R	13136855	exon	Cap-G +	chr2R	13139271	intron	Cap-G +	chr2R	13141687	intron	Cap-G +	chr2R_12_13135001	chr2R_13135001	ISO1-AS-LSg123
48	chr2R	14394209	14394229	chr2R	14399023	14399032	Doc	22	4813	57.5	31.0	44.2	0.5	4823	chr2R	14394209	intergenic	not near genes	chr2R	14396620	intergenic	not near genes	chr2R	14399032	intergenic	not near genes	chr2R_22_14395001	chr2R_14395001	ISO1-AS-LSg123
49	chr2R	15119291	15119349	chr2R	15127797	15127855	Tirant	76	8505	21.0	21.5	21.2	3.4	8564	chr2R	15119291	intron	chn +	chr2R	15123573	intron	chn +	chr2R	15127855	intron	chn +	chr2R_76_15120001	chr2R_15120001	ISO1-AS-LSg123
50	chr2R	17798406	17798409	chr2R	17798902	17798909	297	8	497	54.5	43.5	49.0	0.2	503	chr2R	17798406	intron	Dhit +	chr2R	17798658	intron	Dhit +	chr2R	17798909	intron	Dhit +	chr2R_8_17795001	chr2R_17795001	ISO1-AS-LSg123
54	chr3L	1154106	1154160	chr3L	1163281	1163335	roo	83	9174	28.5	32.5	30.5	2.6	9229	chr3L	1154106	intron	bab2 -	chr3L	1158720	intron	bab2 -	chr3L	1163335	intron	bab2 -	chr3L_83_1155001	chr3L_1155001	ISO1-AS-LSg123
57	chr3L	2927814	2927870	chr3L	2936116	2936172	Tirant	82	8302	24.5	25.0	24.8	3.2	8358	chr3L	2927814	intron	Shab +	chr3L	2931993	intron	Shab +	chr3L	2936172	intron	Shab +	chr3L_82_2930001	chr3L_2930001	ISO1-AS-LSg123
58	chr3L	3281420	3281453	chr3L	3281938	3281974	Doc	57	518	55.5	34.5	45.0	1.2	554	chr3L	3281420	intron	CG12017 +	chr3L	3281697	intron	CG12017 +	chr3L	3281974	intron	CG12017 +	chr3L_57_3280001	chr3L_3280001	ISO1-AS-LSg123
59	chr3L	3281454	3281469	chr3L	3281933	3281990	Doc	44	515	40.5	29.5	35.0	1.2	536	chr3L	3281454	intron	CG12017 +	chr3L	3281722	intron	CG12017 +	chr3L	3281990	intron	CG12017 +	chr3L_44_3280001	chr3L_3280001	ISO1-AS-LSg123
63	chr3L	6855897	6855956	chr3L	6860705	6860711	Doc	66	4803	20.0	36.0	28.0	2.3	4814	chr3L	6855897	intergenic	not near genes	chr3L	6858304	intergenic	not near genes	chr3L	6860711	intergenic	not near genes	chr3L_66_6855001	chr3L_6855001	ISO1-AS-LSg123
64	chr3L	8481745	8481803	chr3L	8490929	8490987	roo	101	9182	22.5	21.0	21.8	4.4	9242	chr3L	8481745	intron	CG43163 -	chr3L	8486366	intron	CG43163 -	chr3L	8490987	intron	CG43163 -	chr3L_101_8485001	chr3L_8485001	ISO1-AS-LSg123
65	chr3L	8791252	8791296	chr3L	8796697	8796741	I-element	82	5445	36.5	44.0	40.2	2.0	5489	chr3L	8791252	exon	Fhos +	chr3L	8793996	intron	Fhos +	chr3L	8796741	intron	Fhos +	chr3L_82_8790001	chr3L_8790001	ISO1-AS-LSg123
66	chr3L	9164671	9164717	chr3L	9166163	9166200	hobo	59	1491	36.0	1.0	18.5	3.0	1529	chr3L	9164671	intron	Rdl -	chr3L	9165436	intron	Rdl -	chr3L	9166200	intron	Rdl -	chr3L_59_9165001	chr3L_9165001	ISO1-AS-LSg123
67	chr3L	9526463	9526469	chr3L	9528168	9528174	Doc	8	1705	65.5	35.5	50.5	0.2	1711	chr3L	9526463	intergenic	not near genes	chr3L	9527318	intergenic	not near genes	chr3L	9528174	intergenic	not near genes	chr3L_8_9525001	chr3L_9525001	ISO1-AS-LSg123
68	chr3L	9526470	9526514	chr3L	9528164	9528218	Doc	74	1704	26.5	32.0	29.2	2.5	1748	chr3L	9526470	intergenic	not near genes	chr3L	9527344	intergenic	not near genes	chr3L	9528218	intergenic	not near genes	chr3L_74_9525001	chr3L_9525001	ISO1-AS-LSg123
75	chr3L	21014890	21014947	chr3L	21023396	21023453	Tirant	90	8505	23.5	25.5	24.5	3.5	8563	chr3L	21014890	intron	skd -	chr3L	21019172	intron	skd -	chr3L	21023453	intron	skd -	chr3L_90_21015001	chr3L_21015001	ISO1-AS-LSg123
77	chr3L	21306124	21306125	chr3L	21315308	21315309	roo	5	9184	79.0	33.0	56.0	0.1	9185	chr3L	21306124	3` UTR	CG7632 +	chr3L	21310716	intron	Pc -	chr3L	21315309	3` UTR	Pc -	chr3L_5_21310001	chr3L_21310001	ISO1-AS-LSg123
78	chr3L	21306126	21306169	chr3L	21315307	21315353	roo	72	9183	40.0	32.5	36.2	1.9	9227	chr3L	21306126	3` UTR	CG7632 +	chr3L	21310740	intron	Pc -	chr3L	21315353	3` UTR	Pc -	chr3L_72_21310001	chr3L_21310001	ISO1-AS-LSg123
79	chr3L	21306170	21306179	chr3L	21315304	21315337	roo	13	9178	31.0	29.0	30.0	0.4	9167	chr3L	21306170	3` UTR,3` UTR	CG7632 +,Pc -	chr3L	21310754	intron	Pc -	chr3L	21315337	3` UTR	Pc -	chr3L_13_21310001	chr3L_21310001	ISO1-AS-LSg123
80	chr3L	22577597	22577617	chr3L	22582410	22582430	Doc	13	4813	41.5	19.0	30.2	0.4	4833	chr3L	22577597	intergenic	not near genes	chr3L	22580014	intergenic	not near genes	chr3L	22582430	3` UTR	CG14459 -	chr3L_13_22580001	chr3L_22580001	ISO1-AS-LSg123
81	chr3L	22577621	22577645	chr3L	22582407	22582458	Doc	29	4810	20.5	17.0	18.8	1.5	4837	chr3L	22577621	intergenic	not near genes	chr3L	22580040	intergenic	not near genes	chr3L	22582458	3` UTR	CG14459 -	chr3L_29_22580001	chr3L_22580001	ISO1-AS-LSg123
82	chr3L	22865962	22865994	chr3L	22867120	22867152	Doc	50	1158	45.0	33.0	39.0	1.2	1190	chr3L	22865962	intron	CG33170 +	chr3L	22866557	intron	CG33170 +	chr3L	22867152	intron	CG33170 +	chr3L_50_22865001	chr3L_22865001	ISO1-AS-LSg123
83	chr3L	22865995	22866014	chr3L	22867118	22867131	Doc	32	1155	27.5	31.0	29.2	1.1	1136	chr3L	22865995	intron	CG33170 +	chr3L	22866563	intron	CG33170 +	chr3L	22867131	intron	CG33170 +	chr3L_32_22865001	chr3L_22865001	ISO1-AS-LSg123
84	chr3L	24791875	24791912	chr3L	24796679	24796716	Doc	7	4804	4.5	6.0	5.2	1.1	4841	chr3L	24791875	intergenic	not near genes	chr3L	24794296	intergenic	not near genes	chr3L	24796716	intergenic	not near genes	chr3L_7_24790001	chr3L_24790001	ISO1-AS-LSg123
88	chr3L	21164093	21164095	chr3L	27176040	27176041	ZAM	4	6011946	116.5	118.5	117.5	0.0	6011948	chr3L	21164093	intron	Ac78C -	chr3L	24170067	intron	Snap25 +	chr3L	27176041	intergenic	not near genes	chr3L_4_24170001	chr3L_24170001	ISO1-AS-LSg123
89	chr3R	5045820	5045829	chr3R	5052947	5052956	HMS-Beagle	15	7127	63.0	28.5	45.8	0.3	7136	chr3R	5045820	3` UTR	CR43635 -	chr3R	5049388	intergenic	not near genes	chr3R	5052956	intergenic	CR45588 -	chr3R_15_5045001	chr3R_5045001	ISO1-AS-LSg123
90	chr3R	5045830	5045876	chr3R	5052946	5053003	HMS-Beagle	86	7126	23.5	27.5	25.5	3.2	7173	chr3R	5045830	intron	CR43635 -	chr3R	5049416	intergenic	not near genes	chr3R	5053003	intergenic	CR45588 -	chr3R_86_5045001	chr3R_5045001	ISO1-AS-LSg123
91	chr3R	6158487	6158490	chr3R	6167095	6167098	Tirant	5	8608	61.5	17.5	39.5	0.1	8611	chr3R	6158487	intergenic	not near genes	chr3R	6162792	intergenic	not near genes	chr3R	6167098	intergenic	CG1077 +	chr3R_5_6160001	chr3R_6160001	ISO1-AS-LSg123
92	chr3R	6158491	6158518	chr3R	6167092	6167126	Tirant	34	8607	44.0	14.0	29.0	1.1	8635	chr3R	6158491	intergenic	not near genes	chr3R	6162808	intergenic	not near genes	chr3R	6167126	intergenic	CG1077 +	chr3R_34_6160001	chr3R_6160001	ISO1-AS-LSg123
93	chr3R	6158520	6158541	chr3R	6167091	6167126	Tirant	41	8601	23.5	14.0	18.8	2.1	8606	chr3R	6158520	intergenic	not near genes	chr3R	6162823	intergenic	not near genes	chr3R	6167126	intergenic	CG1077 +	chr3R_41_6160001	chr3R_6160001	ISO1-AS-LSg123
98	chr3R	16756297	16756302	chr3R	16762513	16762518	diver	4	6216	32.5	10.5	21.5	0.2	6221	chr3R	16756297	intron	bxd -	chr3R	16759408	intron	bxd -	chr3R	16762518	intron	bxd -	chr3R_4_16755001	chr3R_16755001	ISO1-AS-LSg123
99	chr3R	16756303	16756348	chr3R	16762509	16762560	diver	26	6214	18.0	9.0	13.5	1.8	6257	chr3R	16756303	intron	bxd -	chr3R	16759432	intron	bxd -	chr3R	16762560	intron	bxd -	chr3R_26_16755001	chr3R_16755001	ISO1-AS-LSg123
105	chr3R	21141648	21141705	chr3R	21150154	21150211	Tirant	84	8505	24.0	32.0	28.0	2.9	8563	chr3R	21141648	intron	SNF4Agamma +	chr3R	21145930	intron	SNF4Agamma +	chr3R	21150211	intron	SNF4Agamma +	chr3R_84_21145001	chr3R_21145001	ISO1-AS-LSg123
110	chr3R	24076894	24076946	chr3R	24078386	24078398	hobo	73	1490	25.0	32.5	28.8	2.4	1504	chr3R	24076894	intron	4EHP -	chr3R	24077646	intron	4EHP -	chr3R	24078398	intron	4EHP -	chr3R_73_24075001	chr3R_24075001	ISO1-AS-LSg123
113	chr3R	27342770	27342777	chr3R	27351376	27351383	Tirant	10	8606	66.0	26.5	46.2	0.2	8613	chr3R	27342770	intron	CG42534 +	chr3R	27347076	intron	CG42534 +	chr3R	27351383	intron	CG42534 +	chr3R_10_27345001	chr3R_27345001	ISO1-AS-LSg123
114	chr3R	27342778	27342825	chr3R	27351375	27351431	Tirant	70	8605	31.0	25.5	28.2	2.4	8653	chr3R	27342778	intron	CG42534 +	chr3R	27347104	intron	CG42534 +	chr3R	27351431	intron	CG42534 +	chr3R_70_27345001	chr3R_27345001	ISO1-AS-LSg123
117	chr3R	27725547	27725555	chr3R	27731014	27731022	I-element	16	5467	61.0	43.0	52.0	0.3	5475	chr3R	27725547	intergenic	not near genes	chr3R	27728284	intergenic	not near genes	chr3R	27731022	intergenic	not near genes	chr3R_16_27725001	chr3R_27725001	ISO1-AS-LSg123
118	chr3R	27725556	27725592	chr3R	27731012	27731049	I-element	57	5466	32.0	40.5	36.2	1.5	5493	chr3R	27725556	intergenic	not near genes	chr3R	27728302	intergenic	not near genes	chr3R	27731049	intergenic	not near genes	chr3R_57_27725001	chr3R_27725001	ISO1-AS-LSg123
119	chr3R	28068472	28068473	chr3R	28073939	28073940	I-element	4	5467	36.0	16.5	26.2	0.1	5468	chr3R	28068472	intron	CG34362 +	chr3R	28071206	intron	CG34362 +	chr3R	28073940	intron	CG34362 +	chr3R_4_28070001	chr3R_28070001	ISO1-AS-LSg123
120	chr3R	28068477	28068520	chr3R	28073938	28073987	I-element	29	5467	16.5	16.0	16.2	1.7	5510	chr3R	28068477	intron	CG34362 +	chr3R	28071232	intron	CG34362 +	chr3R	28073987	intron	CG34362 +	chr3R_29_28070001	chr3R_28070001	ISO1-AS-LSg123
124	chr3R	29738241	29738297	chr3R	29739733	29739789	hobo	100	1491	37.5	26.0	31.8	3.0	1548	chr3R	29738241	intergenic	CG1969 +,CG7598 +	chr3R	29739015	intron	CG1969 +	chr3R	29739789	5` UTR	CG1969 +	chr3R_100_29735001	chr3R_29735001	ISO1-AS-LSg123
125	chr3R	30084828	30084878	chr3R	30086320	30086370	hobo	74	1492	30.5	41.5	36.0	2.0	1542	chr3R	30084828	intron	sima +	chr3R	30085599	intron	sima +	chr3R	30086370	intron	sima +	chr3R_74_30085001	chr3R_30085001	ISO1-AS-LSg123
126	chr3R	31279352	31279405	chr3R	31285568	31285621	diver	78	6215	35.0	32.0	33.5	2.3	6269	chr3R	31279352	intergenic	not near genes	chr3R	31282486	intergenic	not near genes	chr3R	31285621	intergenic	not near genes	chr3R_78_31280001	chr3R_31280001	ISO1-AS-LSg123
127	chr3R	31691506	31691562	chr3R	31696297	31696353	Doc	84	4790	24.5	27.5	26.0	3.1	4847	chr3R	31691506	intergenic	not near genes	chr3R	31693930	intergenic	not near genes	chr3R	31696353	intergenic	not near genes	chr3R_84_31690001	chr3R_31690001	ISO1-AS-LSg123
128	chr4	671578	671634	chr4	680186	680233	Tirant	88	8608	28.5	30.0	29.2	2.9	8655	chr4	671578	intron	CG11360 +	chr4	675906	intron	CG11360 +	chr4	680233	intron	CG11360 +	chr4_88_675001	chr4_675001	ISO1-AS-LSg123
129	chrX	1627965	1627977	chrX	1635458	1635470	gtwin	16	7493	39.5	44.5	42.0	0.4	7505	chrX	1627965	intron,intron	Mur2B -,br +	chrX	1631718	intron,intron	Mur2B -,br +	chrX	1635470	intron,intron	Mur2B -,br +	chrX_16_1630001	chrX_1630001	ISO1-AS-LSg123
130	chrX	2308818	2308825	chrX	2317426	2317435	Tirant	14	8608	18.5	57.5	38.0	0.4	8617	chrX	2308818	intron	phl +	chrX	2313126	intron	phl +	chrX	2317435	intron	phl +	chrX_14_2310001	chrX_2310001	ISO1-AS-LSg123
132	chrX	6335211	6335243	chrX	6337719	6337778	Tirant	47	2534	2.0	19.0	10.5	4.1	2567	chrX	6335211	intergenic	not near genes	chrX	6336494	intergenic	not near genes	chrX	6337778	5` UTR	CG3842 +	chrX_47_6335001	chrX_6335001	ISO1-AS-LSg123
133	chrX	6562796	6562849	chrX	6571303	6571356	Tirant	82	8506	18.5	27.0	22.8	3.4	8560	chrX	6562796	intron	CG34417 +	chrX	6567076	intron	CG34417 +	chrX	6571356	intron	CG34417 +	chrX_82_6565001	chrX_6565001	ISO1-AS-LSg123
134	chrX	10525051	10525075	chrX	10532129	10532167	297	45	7077	51.5	28.5	40.0	1.1	7116	chrX	10525051	intron	spri -	chrX	10528609	intron	spri -	chrX	10532167	intron	spri -	chrX_45_10525001	chrX_10525001	ISO1-AS-LSg123
135	chrX	10550832	10550882	chrX	10552324	10552374	hobo	65	1491	29.0	25.0	27.0	2.3	1542	chrX	10550832	intron	spri -	chrX	10551603	intron	spri -	chrX	10552374	intron	spri -	chrX_65_10550001	chrX_10550001	ISO1-AS-LSg123
136	chrX	10772650	10772698	chrX	10772758	10772806	Tirant	51	108	27.0	15.0	21.0	2.3	156	chrX	10772650	intron	CG15211 +	chrX	10772728	intron	CG15211 +	chrX	10772806	intron	CG15211 +	chrX_51_10770001	chrX_10770001	ISO1-AS-LSg123
137	chrX	11633391	11633447	chrX	11640470	11640526	297	64	7079	25.5	28.0	26.8	2.3	7135	chrX	11633391	intron	Ptp10D +	chrX	11636958	intron	Ptp10D +	chrX	11640526	intron	Ptp10D +	chrX_64_11635001	chrX_11635001	ISO1-AS-LSg123
138	chrX	13937953	13938005	chrX	13941249	13941288	I-element	77	3295	21.5	20.5	21.0	3.5	3335	chrX	13937953	intron	mamo -	chrX	13939620	intron	mamo -	chrX	13941288	intron	mamo -	chrX_77_13935001	chrX_13935001	ISO1-AS-LSg123
140	chrX	15326708	15326718	chrX	15326931	15326941	I-element	16	223	17.0	19.5	18.2	0.8	233	chrX	15326708	3` UTR	Top1 +	chrX	15326824	3` UTR	Top1 +	chrX	15326941	3` UTR	Top1 +	chrX_16_15325001	chrX_15325001	ISO1-AS-LSg123
143	chrX	20377325	20377325	chrX	20378815	20378817	hobo	4	1492	40.0	51.5	45.8	0.1	1492	chrX	20377325	intergenic	not near genes	chrX	20378071	intergenic	not near genes	chrX	20378817	intergenic	not near genes	chrX_4_20375001	chrX_20375001	ISO1-AS-LSg123
144	chrX	20377326	20377348	chrX	20378797	20378840	hobo	28	1490	28.5	37.5	33.0	0.8	1514	chrX	20377326	intergenic	not near genes	chrX	20378083	intergenic	not near genes	chrX	20378840	intergenic	not near genes	chrX_28_20375001	chrX_20375001	ISO1-AS-LSg123
145	chrX	20940699	20940731	chrX	20942193	20942225	hobo	22	1494	18.0	14.5	16.2	1.3	1526	chrX	20940699	intergenic	not near genes	chrX	20941462	intergenic	not near genes	chrX	20942225	intergenic	not near genes	chrX_22_20940001	chrX_20940001	ISO1-AS-LSg123
146	chrX	20940733	20940739	chrX	20942185	20942233	hobo	7	1487	15.0	8.0	11.5	0.6	1500	chrX	20940733	intergenic	not near genes	chrX	20941483	intergenic	not near genes	chrX	20942233	intergenic	not near genes	chrX_7_20940001	chrX_20940001	ISO1-AS-LSg123
147	chrX	20956968	20957009	chrX	20962435	20962476	I-element	40	5467	28.0	16.0	22.0	1.7	5508	chrX	20956968	intergenic	not near genes	chrX	20959722	intergenic	not near genes	chrX	20962476	intergenic	Ser6 -	chrX_40_20955001	chrX_20955001	ISO1-AS-LSg123