SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 931570 931652 chr2L 931724 931806 23 154 7.5 11.5 9.5 2.2 236 chr2L 931570 intron CG4341 + chr2L 931688 intron CG4341 + chr2L 931806 intron CG4341 + chr2L_23_930001 chr2L_930001 CanS-SH 2 chr2L 936468 936567 chr2L 936671 936770 21 203 6.0 0.0 3.0 5.2 302 chr2L 936468 intron CG4341 + chr2L 936619 intron CG4341 + chr2L 936770 intron CG4341 + chr2L_21_935001 chr2L_935001 CanS-SH 3 chr2L 953429 953521 chr2L 953588 953681 16 160 6.5 4.0 5.2 2.6 252 chr2L 953429 exon CG4341 + chr2L 953555 intron CG4341 + chr2L 953681 intron CG4341 + chr2L_16_950001 chr2L_950001 CanS-SH 4 chr2L 964481 964573 chr2L 964640 964732 50 159 8.5 9.0 8.8 5.1 251 chr2L 964481 intergenic not near genes chr2L 964606 intergenic not near genes chr2L 964732 intergenic not near genes chr2L_50_960001 chr2L_960001 CanS-SH 5 chr2L 976815 976905 chr2L 984526 984616 roo 5 7711 6.5 10.0 8.2 0.5 7801 chr2L 976815 intergenic not near genes chr2L 980716 intergenic not near genes chr2L 984616 intergenic not near genes chr2L_5_980001 chr2L_980001 CanS-SH 6 chr2L 996663 996699 chr2L 1005833 1005869 roo 13 9170 16.0 9.5 12.8 0.9 9206 chr2L 996663 intergenic not near genes chr2L 1001266 intergenic not near genes chr2L 1005869 intergenic not near genes chr2L_13_1000001 chr2L_1000001 CanS-SH 7 chr2L 1025052 1025118 chr2L 1025207 1025273 15 155 8.5 9.5 9.0 1.5 221 chr2L 1025052 intron IA-2 - chr2L 1025162 intron IA-2 - chr2L 1025273 intron IA-2 - chr2L_15_1025001 chr2L_1025001 CanS-SH 8 chr2L 1035516 1035585 chr2L 1035668 1035737 20 152 11.5 12.5 12.0 1.5 221 chr2L 1035516 intron IA-2 - chr2L 1035626 intron IA-2 - chr2L 1035737 intron IA-2 - chr2L_20_1035001 chr2L_1035001 CanS-SH 9 chr2L 1041013 1041100 chr2L 1041237 1041324 20 224 9.5 0.0 4.8 3.4 311 chr2L 1041013 intron IA-2 - chr2L 1041168 intron IA-2 - chr2L 1041324 intron IA-2 - chr2L_20_1040001 chr2L_1040001 CanS-SH 10 chr2L 1042546 1042554 chr2L 1042698 1042706 4 152 2.5 0.0 1.2 1.8 160 chr2L 1042546 intron IA-2 - chr2L 1042626 intron IA-2 - chr2L 1042706 intron IA-2 - chr2L_4_1040001 chr2L_1040001 CanS-SH 11 chr2L 1057413 1057434 chr2L 1057571 1057591 5 158 9.5 6.0 7.8 0.6 178 chr2L 1057413 intron S - chr2L 1057502 intron S - chr2L 1057591 intron S - chr2L_5_1055001 chr2L_1055001 CanS-SH 12 chr2L 1126638 1126697 chr2L 1126789 1126848 11 151 6.5 10.5 8.5 1.2 210 chr2L 1126638 intron Pino - chr2L 1126743 intron Pino - chr2L 1126848 intron Pino - chr2L_11_1125001 chr2L_1125001 CanS-SH 13 chr2L 1156793 1156887 chr2L 1156973 1157067 9 180 6.5 6.5 6.5 1.2 274 chr2L 1156793 intron capt - chr2L 1156930 intron capt - chr2L 1157067 intron capt - chr2L_9_1155001 chr2L_1155001 CanS-SH 14 chr2L 1199797 1199821 chr2L 1199980 1200004 9 183 8.0 10.5 9.2 0.9 207 chr2L 1199797 3` UTR CG43348 + chr2L 1199900 3` UTR CG43348 + chr2L 1200004 intergenic CG43348 +,CG43349 + chr2L_9_1195001 chr2L_1195001 CanS-SH 15 chr2L 1220071 1220105 chr2L 1227612 1227646 blood 18 7541 11.5 9.0 10.2 1.6 7575 chr2L 1220071 intron CG42329 + chr2L 1223858 intron CG42329 + chr2L 1227646 intron CG42329 + chr2L_18_1220001 chr2L_1220001 CanS-SH 16 chr2L 1261057 1261257 chr2L 1261213 1261412 25 164 0.0 0.0 0.0 25.0 355 chr2L 1261057 intron robo3 + chr2L 1261234 intron robo3 + chr2L 1261412 intron robo3 + chr2L_25_1260001 chr2L_1260001 CanS-SH 17 chr2L 1321960 1322044 chr2L 1322124 1322208 21 164 6.5 5.0 5.8 3.1 248 chr2L 1321960 intergenic not near genes chr2L 1322084 intergenic not near genes chr2L 1322208 intergenic not near genes chr2L_21_1320001 chr2L_1320001 CanS-SH 18 chr2L 1464083 1464180 chr2L 1464390 1464487 17 307 6.0 10.0 8.0 1.9 404 chr2L 1464083 intergenic not near genes chr2L 1464285 intergenic not near genes chr2L 1464487 intergenic not near genes chr2L_17_1460001 chr2L_1460001 CanS-SH 19 chr2L 1529035 1529087 chr2L 1529201 1529253 14 166 6.0 9.0 7.5 1.6 218 chr2L 1529035 intergenic not near genes chr2L 1529144 intergenic not near genes chr2L 1529253 intergenic not near genes chr2L_14_1525001 chr2L_1525001 CanS-SH 20 chr2L 1570633 1570653 chr2L 1573580 1573600 F-element 4 2947 17.5 9.0 13.2 0.3 2967 chr2L 1570633 intron haf + chr2L 1572116 intron haf + chr2L 1573600 intron haf + chr2L_4_1570001 chr2L_1570001 CanS-SH 21 chr2L 1618197 1618211 chr2L 1618602 1618616 jockey 4 405 8.5 3.0 5.8 0.6 419 chr2L 1618197 intergenic CR44603 - chr2L 1618406 intergenic CR44603 - chr2L 1618616 intergenic CR44603 - chr2L_4_1615001 chr2L_1615001 CanS-SH 22 chr2L 1625500 1625532 chr2L 1625658 1625690 9 158 0.0 15.5 7.8 1.0 190 chr2L 1625500 3` UTR CR44603 - chr2L 1625595 3` UTR CR44603 - chr2L 1625690 3` UTR CR44603 - chr2L_9_1625001 chr2L_1625001 CanS-SH 23 chr2L 1634694 1634741 chr2L 1634860 1634907 11 166 8.5 7.5 8.0 1.2 213 chr2L 1634694 intergenic not near genes chr2L 1634800 intergenic not near genes chr2L 1634907 intergenic not near genes chr2L_11_1630001 chr2L_1630001 CanS-SH 24 chr2L 1678901 1678938 chr2L 1686459 1686496 blood 6 7558 9.0 7.5 8.2 0.7 7595 chr2L 1678901 intron chinmo + chr2L 1682698 intron chinmo + chr2L 1686496 intron chinmo + chr2L_6_1680001 chr2L_1680001 CanS-SH 25 chr2L 1711304 1711335 chr2L 1711703 1711734 mdg3 13 399 13.5 12.0 12.8 0.9 430 chr2L 1711304 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711519 3` UTR frtz - chr2L 1711734 3` UTR frtz - chr2L_13_1710001 chr2L_1710001 CanS-SH 26 chr2L 1721816 1721839 chr2L 1721975 1721998 12 159 0.0 18.0 9.0 1.2 182 chr2L 1721816 intron Rim2 - chr2L 1721907 intron Rim2 - chr2L 1721998 intron Rim2 - chr2L_12_1720001 chr2L_1720001 CanS-SH 27 chr2L 1883344 1883444 chr2L 1884002 1884099 10 657 4.0 3.0 3.5 2.2 755 chr2L 1883344 intron CG15358 - chr2L 1883722 intron CG15358 - chr2L 1884099 intergenic CG15358 - chr2L_10_1880001 chr2L_1880001 CanS-SH 28 chr2L 1924358 1924452 chr2L 1924515 1924615 18 161 8.5 8.5 8.5 1.9 257 chr2L 1924358 intron CG7337 + chr2L 1924486 intron CG7337 + chr2L 1924615 intron CG7337 + chr2L_18_1920001 chr2L_1920001 CanS-SH 29 chr2L 1987802 1987872 chr2L 1988091 1988161 14 289 6.5 3.5 5.0 2.3 359 chr2L 1987802 intergenic Got2 -,Npc2a + chr2L 1987982 intergenic Got2 -,Npc2a + chr2L 1988161 intergenic Npc2a +,Got2 - chr2L_14_1985001 chr2L_1985001 CanS-SH 30 chr2L 2065219 2065236 chr2L 2065374 2065391 6 155 8.5 11.5 10.0 0.5 172 chr2L 2065219 intron dpr3 - chr2L 2065305 intron dpr3 - chr2L 2065391 intron dpr3 - chr2L_6_2065001 chr2L_2065001 CanS-SH 31 chr2L 2068749 2068767 chr2L 2069008 2069026 9 259 18.5 6.5 12.5 0.7 277 chr2L 2068749 intron dpr3 - chr2L 2068888 intron dpr3 - chr2L 2069026 intron dpr3 - chr2L_9_2065001 chr2L_2065001 CanS-SH 32 chr2L 2073295 2073346 chr2L 2073453 2073504 12 158 13.5 7.5 10.5 1.0 209 chr2L 2073295 intron dpr3 - chr2L 2073400 intron dpr3 - chr2L 2073504 intron dpr3 - chr2L_12_2070001 chr2L_2070001 CanS-SH 33 chr2L 2084342 2084424 chr2L 2085366 2085446 12 1022 5.0 6.0 5.5 1.8 1104 chr2L 2084342 intron,5` UTR dpr3 -,CR44055 + chr2L 2084894 intron dpr3 - chr2L 2085446 intron dpr3 - chr2L_12_2080001 chr2L_2080001 CanS-SH 34 chr2L 2089864 2089909 chr2L 2090248 2090293 16 384 17.0 4.0 10.5 1.4 429 chr2L 2089864 intron dpr3 - chr2L 2090078 intron dpr3 - chr2L 2090293 intron dpr3 - chr2L_16_2090001 chr2L_2090001 CanS-SH 35 chr2L 2100300 2100312 chr2L 2109533 2109545 roo 6 9233 23.0 9.0 16.0 0.4 9245 chr2L 2100300 intron dpr3 - chr2L 2104922 intron dpr3 - chr2L 2109545 intron dpr3 - chr2L_6_2100001 chr2L_2100001 CanS-SH 36 chr2L 2112048 2112086 chr2L 2119785 2119823 opus 13 7737 8.0 8.5 8.2 1.4 7775 chr2L 2112048 intergenic not near genes chr2L 2115936 intergenic not near genes chr2L 2119823 intergenic not near genes chr2L_13_2115001 chr2L_2115001 CanS-SH 37 chr2L 2172704 2172795 chr2L 2172875 2172965 25 171 11.0 7.0 9.0 2.5 261 chr2L 2172704 intron aop - chr2L 2172834 intron aop - chr2L 2172965 intron aop - chr2L_25_2170001 chr2L_2170001 CanS-SH 38 chr2L 2256402 2256478 chr2L 2256557 2256633 23 155 6.5 10.0 8.2 2.5 231 chr2L 2256402 intergenic not near genes chr2L 2256518 intergenic not near genes chr2L 2256633 intergenic not near genes chr2L_23_2255001 chr2L_2255001 CanS-SH 39 chr2L 2260743 2260818 chr2L 2260904 2260979 30 161 10.5 9.0 9.8 2.8 236 chr2L 2260743 intergenic not near genes chr2L 2260861 intergenic not near genes chr2L 2260979 intergenic not near genes chr2L_30_2260001 chr2L_2260001 CanS-SH 40 chr2L 2261622 2261685 chr2L 2261774 2261837 15 152 4.5 6.5 5.5 2.3 215 chr2L 2261622 intergenic not near genes chr2L 2261730 intergenic not near genes chr2L 2261837 intergenic not near genes chr2L_15_2260001 chr2L_2260001 CanS-SH 41 chr2L 2293992 2294063 chr2L 2299272 2299343 copia 10 5280 5.5 2.0 3.8 2.1 5351 chr2L 2293992 intergenic not near genes chr2L 2296668 intergenic not near genes chr2L 2299343 intergenic not near genes chr2L_10_2295001 chr2L_2295001 CanS-SH 42 chr2L 2311008 2311091 chr2L 2311185 2311262 8 176 0.0 6.5 3.2 1.9 254 chr2L 2311008 intron CG9967 - chr2L 2311135 intron CG9967 - chr2L 2311262 intron CG9967 - chr2L_8_2310001 chr2L_2310001 CanS-SH 43 chr2L 2475610 2475685 chr2L 2475770 2475845 23 160 6.5 12.5 9.5 2.2 235 chr2L 2475610 intergenic not near genes chr2L 2475728 intergenic not near genes chr2L 2475845 intergenic not near genes chr2L_23_2475001 chr2L_2475001 CanS-SH 44 chr2L 2497571 2497613 chr2L 2497722 2497764 17 151 10.0 5.0 7.5 2.0 193 chr2L 2497571 3` UTR oaf + chr2L 2497668 3` UTR oaf + chr2L 2497764 3` UTR oaf + chr2L_17_2495001 chr2L_2495001 CanS-SH 45 chr2L 2504151 2504230 chr2L 2504304 2504383 16 153 3.0 9.0 6.0 2.3 232 chr2L 2504151 intergenic not near genes chr2L 2504267 intergenic not near genes chr2L 2504383 intergenic not near genes chr2L_16_2500001 chr2L_2500001 CanS-SH 46 chr2L 2543414 2543505 chr2L 2543597 2543688 16 183 1.5 9.5 5.5 2.5 274 chr2L 2543414 intergenic not near genes chr2L 2543551 intergenic not near genes chr2L 2543688 intergenic not near genes chr2L_16_2540001 chr2L_2540001 CanS-SH 47 chr2L 2565484 2565517 chr2L 2571627 2571660 297 13 6143 10.5 14.5 12.5 1.0 6176 chr2L 2565484 exon Cyp309a2 - chr2L 2568572 intron Cyp309a2 - chr2L 2571660 exon Cyp309a2 - chr2L_13_2565001 chr2L_2565001 CanS-SH 48 chr2L 2661141 2661162 chr2L 2663054 2663075 I-element 4 1913 10.0 6.0 8.0 0.4 1934 chr2L 2661141 intergenic not near genes chr2L 2662108 intergenic not near genes chr2L 2663075 intergenic not near genes chr2L_4_2660001 chr2L_2660001 CanS-SH 49 chr2L 2800535 2800559 chr2L 2800693 2800716 13 158 13.5 0.0 6.8 1.7 181 chr2L 2800535 intergenic not near genes chr2L 2800626 intergenic not near genes chr2L 2800716 intergenic not near genes chr2L_13_2800001 chr2L_2800001 CanS-SH 50 chr2L 2804185 2804248 chr2L 2804349 2804412 15 164 12.0 13.0 12.5 1.1 227 chr2L 2804185 intergenic not near genes chr2L 2804298 intergenic not near genes chr2L 2804412 intergenic not near genes chr2L_15_2800001 chr2L_2800001 CanS-SH 51 chr2L 2826462 2826573 chr2L 2826629 2826733 32 167 2.5 4.5 3.5 7.1 271 chr2L 2826462 intron Duox - chr2L 2826598 intron Duox - chr2L 2826733 intron Duox - chr2L_32_2825001 chr2L_2825001 CanS-SH 52 chr2L 2830358 2830419 chr2L 2830563 2830624 11 205 6.0 4.0 5.0 1.8 266 chr2L 2830358 intergenic Duox - chr2L 2830491 intergenic Duox - chr2L 2830624 intergenic Duox - chr2L_11_2830001 chr2L_2830001 CanS-SH 53 chr2L 2873415 2873463 chr2L 2873568 2873616 9 153 1.0 13.5 7.2 1.1 201 chr2L 2873415 intron CG31694 - chr2L 2873516 intron CG31694 - chr2L 2873616 intron CG31694 - chr2L_9_2870001 chr2L_2870001 CanS-SH 54 chr2L 2937355 2937423 chr2L 2937507 2937575 27 152 11.0 7.5 9.2 2.6 220 chr2L 2937355 intron lilli + chr2L 2937465 intron lilli + chr2L 2937575 intron lilli + chr2L_27_2935001 chr2L_2935001 CanS-SH 55 chr2L 3072971 3073009 chr2L 3078249 3078287 copia 8 5278 22.0 5.5 13.8 0.5 5316 chr2L 3072971 intron toc - chr2L 3075629 intron toc - chr2L 3078287 intron toc - chr2L_8_3075001 chr2L_3075001 CanS-SH 56 chr2L 3108846 3108892 chr2L 3108998 3109044 14 152 12.5 14.0 13.2 1.0 198 chr2L 3108846 exon toc - chr2L 3108945 intron toc - chr2L 3109044 intron toc - chr2L_14_3105001 chr2L_3105001 CanS-SH 57 chr2L 3112407 3112463 chr2L 3112562 3112618 15 155 9.5 1.0 5.2 2.4 211 chr2L 3112407 intron toc - chr2L 3112512 intron toc - chr2L 3112618 intron toc - chr2L_15_3110001 chr2L_3110001 CanS-SH 58 chr2L 3134227 3134278 chr2L 3134378 3134429 18 151 11.0 14.5 12.8 1.3 202 chr2L 3134227 intron toc - chr2L 3134328 intron toc - chr2L 3134429 intron toc - chr2L_18_3130001 chr2L_3130001 CanS-SH 59 chr2L 3134877 3134954 chr2L 3135029 3135106 21 152 9.0 8.0 8.5 2.2 229 chr2L 3134877 intron toc - chr2L 3134992 intron toc - chr2L 3135106 intron toc - chr2L_21_3130001 chr2L_3130001 CanS-SH 60 chr2L 3156502 3156561 chr2L 3156674 3156733 9 172 0.0 11.0 5.5 1.4 231 chr2L 3156502 intron Mad - chr2L 3156618 intron Mad - chr2L 3156733 intron Mad - chr2L_9_3155001 chr2L_3155001 CanS-SH 61 chr2L 3159639 3159698 chr2L 3159790 3159849 8 151 5.5 5.5 5.5 1.2 210 chr2L 3159639 5` UTR Mad - chr2L 3159744 intergenic Mad -,gkt + chr2L 3159849 intergenic gkt +,Mad - chr2L_8_3155001 chr2L_3155001 CanS-SH 62 chr2L 3185027 3185103 chr2L 3185178 3185254 11 151 5.5 0.0 2.8 2.9 227 chr2L 3185027 exon CG34393 - chr2L 3185140 intron CG34393 - chr2L 3185254 intron CG34393 - chr2L_11_3185001 chr2L_3185001 CanS-SH 63 chr2L 3202674 3202772 chr2L 3210178 3210259 mdg1 21 7501 4.0 0.0 2.0 7.0 7585 chr2L 3202674 intergenic not near genes chr2L 3206466 intergenic not near genes chr2L 3210259 intergenic CR45336 + chr2L_21_3205001 chr2L_3205001 CanS-SH 64 chr2L 3232013 3232030 chr2L 3232172 3232189 5 159 11.5 0.0 5.8 0.7 176 chr2L 3232013 intergenic not near genes chr2L 3232101 intergenic not near genes chr2L 3232189 intergenic not near genes chr2L_5_3230001 chr2L_3230001 CanS-SH 65 chr2L 3240546 3240583 chr2L 3240993 3241030 13 447 18.5 12.5 15.5 0.8 484 chr2L 3240546 intergenic not near genes chr2L 3240788 intergenic not near genes chr2L 3241030 intergenic not near genes chr2L_13_3240001 chr2L_3240001 CanS-SH 66 chr2L 3260639 3260716 chr2L 3260854 3260931 17 215 8.5 7.0 7.8 1.9 292 chr2L 3260639 intergenic CR45337 - chr2L 3260785 intergenic CR45337 - chr2L 3260931 intergenic CR45337 - chr2L_17_3260001 chr2L_3260001 CanS-SH 67 chr2L 3261287 3261482 chr2L 3261510 3261649 15 171 5.0 5.0 5.0 2.5 362 chr2L 3261287 intergenic CR45337 -,CR45338 - chr2L 3261468 intergenic CR45338 -,CR45337 - chr2L 3261649 3` UTR CR45338 - chr2L_15_3260001 chr2L_3260001 CanS-SH 68 chr2L 3272905 3272966 chr2L 3273056 3273117 22 151 0.5 12.5 6.5 2.9 212 chr2L 3272905 intergenic not near genes chr2L 3273011 intergenic not near genes chr2L 3273117 intergenic not near genes chr2L_22_3270001 chr2L_3270001 CanS-SH 69 chr2L 3291169 3291256 chr2L 3291324 3291411 24 155 5.0 8.5 6.8 3.1 242 chr2L 3291169 intergenic CG9664 - chr2L 3291290 3` UTR CG9664 - chr2L 3291411 3` UTR CG9664 - chr2L_24_3290001 chr2L_3290001 CanS-SH 70 chr2L 3366509 3366559 chr2L 3366667 3366739 12 167 8.0 0.0 4.0 2.4 230 chr2L 3366509 intron CG34394 - chr2L 3366624 intron CG34394 - chr2L 3366739 intron CG34394 - chr2L_12_3365001 chr2L_3365001 CanS-SH 71 chr2L 3388538 3388580 chr2L 3388854 3388896 pogo 18 316 13.5 9.5 11.5 1.4 358 chr2L 3388538 intergenic CG42460 - chr2L 3388717 intergenic CG42460 - chr2L 3388896 intergenic CG42460 -,CR44791 + chr2L_18_3385001 chr2L_3385001 CanS-SH 72 chr2L 3393721 3393800 chr2L 3393881 3393960 25 160 6.0 4.5 5.2 4.0 239 chr2L 3393721 intergenic not near genes chr2L 3393840 intergenic not near genes chr2L 3393960 intergenic not near genes chr2L_25_3390001 chr2L_3390001 CanS-SH 73 chr2L 3396518 3396612 chr2L 3396790 3396884 16 272 4.5 7.5 6.0 2.3 366 chr2L 3396518 intergenic not near genes chr2L 3396701 intergenic not near genes chr2L 3396884 intergenic CR44792 - chr2L_16_3395001 chr2L_3395001 CanS-SH 74 chr2L 3437071 3437159 chr2L 3437241 3437317 10 166 0.0 6.0 3.0 2.5 246 chr2L 3437071 intergenic not near genes chr2L 3437194 intergenic not near genes chr2L 3437317 intergenic not near genes chr2L_10_3435001 chr2L_3435001 CanS-SH 75 chr2L 3569918 3569963 chr2L 3570100 3570145 10 182 10.5 7.5 9.0 1.0 227 chr2L 3569918 intergenic not near genes chr2L 3570032 intergenic not near genes chr2L 3570145 intergenic not near genes chr2L_10_3570001 chr2L_3570001 CanS-SH 76 chr2L 3582832 3582844 chr2L 3582984 3582996 7 152 3.0 8.5 5.8 1.0 164 chr2L 3582832 intergenic not near genes chr2L 3582914 intergenic not near genes chr2L 3582996 intergenic not near genes chr2L_7_3580001 chr2L_3580001 CanS-SH 77 chr2L 3611450 3611463 chr2L 3611612 3611625 5 162 9.0 5.0 7.0 0.6 175 chr2L 3611450 intergenic not near genes chr2L 3611538 intergenic not near genes chr2L 3611625 intergenic not near genes chr2L_5_3610001 chr2L_3610001 CanS-SH 78 chr2L 3616509 3616587 chr2L 3616661 3616739 18 152 6.0 10.5 8.2 2.0 230 chr2L 3616509 5` UTR CR44310 + chr2L 3616624 5` UTR CR44310 + chr2L 3616739 5` UTR CR44310 + chr2L_18_3615001 chr2L_3615001 CanS-SH 79 chr2L 3643388 3643450 chr2L 3643544 3643606 30 156 10.5 7.0 8.8 3.1 218 chr2L 3643388 intron for - chr2L 3643497 intron for - chr2L 3643606 intron for - chr2L_30_3640001 chr2L_3640001 CanS-SH 80 chr2L 3649719 3649806 chr2L 3654990 3655083 copia 7 5276 5.0 4.5 4.8 1.2 5364 chr2L 3649719 intron for - chr2L 3652401 intron for - chr2L 3655083 intron for - chr2L_7_3650001 chr2L_3650001 CanS-SH 81 chr2L 3685954 3686053 chr2L 3686117 3686216 11 163 3.5 7.5 5.5 1.7 262 chr2L 3685954 intron CG34340 + chr2L 3686085 intron CG34340 + chr2L 3686216 intron CG34340 + chr2L_11_3685001 chr2L_3685001 CanS-SH 82 chr2L 3707501 3707582 chr2L 3707660 3707741 22 159 12.0 8.0 10.0 2.0 240 chr2L 3707501 intron cutlet - chr2L 3707621 intron cutlet - chr2L 3707741 intron cutlet - chr2L_22_3705001 chr2L_3705001 CanS-SH 83 chr2L 3831772 3831861 chr2L 3831928 3832017 19 156 7.0 7.5 7.2 2.3 245 chr2L 3831772 intergenic not near genes chr2L 3831894 intergenic not near genes chr2L 3832017 intergenic not near genes chr2L_19_3830001 chr2L_3830001 CanS-SH 84 chr2L 3898194 3898305 chr2L 3898354 3898457 23 160 6.0 7.0 6.5 3.1 263 chr2L 3898194 intron capu - chr2L 3898326 intron capu - chr2L 3898457 intron capu - chr2L_23_3895001 chr2L_3895001 CanS-SH 85 chr2L 3905976 3906015 chr2L 3906197 3906236 14 221 10.0 11.0 10.5 1.2 260 chr2L 3905976 intron fred - chr2L 3906106 intron fred - chr2L 3906236 intron fred - chr2L_14_3905001 chr2L_3905001 CanS-SH 86 chr2L 3911588 3911675 chr2L 3911741 3911828 18 153 6.0 2.0 4.0 3.6 240 chr2L 3911588 intron fred - chr2L 3911708 intron fred - chr2L 3911828 intron,3` UTR fred -,CG31773 - chr2L_18_3910001 chr2L_3910001 CanS-SH 87 chr2L 3936578 3936653 chr2L 3936734 3936808 19 155 5.5 7.0 6.2 2.6 230 chr2L 3936578 intron fred - chr2L 3936693 intron fred - chr2L 3936808 intron fred - chr2L_19_3935001 chr2L_3935001 CanS-SH 88 chr2L 3943721 3943785 chr2L 3943887 3943951 11 166 8.5 7.0 7.8 1.2 230 chr2L 3943721 intron fred - chr2L 3943836 intron fred - chr2L 3943951 intron fred - chr2L_11_3940001 chr2L_3940001 CanS-SH 89 chr2L 3962062 3962124 chr2L 3962217 3962279 16 155 5.5 6.0 5.8 2.4 217 chr2L 3962062 intron fred - chr2L 3962170 intron fred - chr2L 3962279 intron fred - chr2L_16_3960001 chr2L_3960001 CanS-SH 90 chr2L 4037726 4037807 chr2L 4037888 4037969 27 162 9.5 10.5 10.0 2.5 243 chr2L 4037726 intron ed + chr2L 4037848 intron ed + chr2L 4037969 intron ed + chr2L_27_4035001 chr2L_4035001 CanS-SH 91 chr2L 4048701 4048776 chr2L 4048861 4048928 12 157 3.5 5.5 4.5 2.2 227 chr2L 4048701 intron ed + chr2L 4048814 intron ed + chr2L 4048928 intron ed + chr2L_12_4045001 chr2L_4045001 CanS-SH 92 chr2L 4061080 4061172 chr2L 4061638 4061730 19 558 4.5 8.0 6.2 2.6 650 chr2L 4061080 intron ed + chr2L 4061405 intron ed + chr2L 4061730 intron ed + chr2L_19_4060001 chr2L_4060001 CanS-SH 93 chr2L 4065985 4066012 chr2L 4068885 4068912 Juan 4 2900 11.5 16.0 13.8 0.3 2927 chr2L 4065985 intron ed + chr2L 4067448 intron ed + chr2L 4068912 intron ed + chr2L_4_4065001 chr2L_4065001 CanS-SH 94 chr2L 4109890 4109934 chr2L 4110049 4110093 19 159 14.0 12.0 13.0 1.4 203 chr2L 4109890 intron ed + chr2L 4109992 intron ed + chr2L 4110093 intron ed + chr2L_19_4105001 chr2L_4105001 CanS-SH 95 chr2L 4112661 4112750 chr2L 4112880 4112969 10 219 3.0 6.5 4.8 1.7 308 chr2L 4112661 intron ed + chr2L 4112815 intron ed + chr2L 4112969 intron ed + chr2L_10_4110001 chr2L_4110001 CanS-SH 96 chr2L 4138093 4138154 chr2L 4138249 4138310 20 156 8.0 12.5 10.2 1.8 217 chr2L 4138093 intergenic not near genes chr2L 4138202 intergenic not near genes chr2L 4138310 intergenic not near genes chr2L_20_4135001 chr2L_4135001 CanS-SH 97 chr2L 4143644 4143681 chr2L 4143937 4143974 16 293 3.0 5.5 4.2 3.1 330 chr2L 4143644 intergenic not near genes chr2L 4143809 intergenic not near genes chr2L 4143974 intergenic not near genes chr2L_16_4140001 chr2L_4140001 CanS-SH 98 chr2L 4152983 4153000 chr2L 4153183 4153200 6 200 7.5 0.0 3.8 1.2 217 chr2L 4152983 intergenic not near genes chr2L 4153092 intergenic not near genes chr2L 4153200 intergenic not near genes chr2L_6_4150001 chr2L_4150001 CanS-SH 99 chr2L 4192920 4193005 chr2L 4193076 4193162 26 157 10.0 7.5 8.8 2.7 242 chr2L 4192920 intron CG3714 - chr2L 4193041 intron CG3714 - chr2L 4193162 intron CG3714 - chr2L_26_4190001 chr2L_4190001 CanS-SH 100 chr2L 4256495 4256572 chr2L 4256650 4256727 11 155 0.0 7.0 3.5 2.4 232 chr2L 4256495 3` UTR CR45295 - chr2L 4256611 intergenic CR45295 -,CR45296 - chr2L 4256727 intergenic CR45296 -,CR45295 - chr2L_11_4255001 chr2L_4255001 CanS-SH 101 chr2L 4265585 4265686 chr2L 4265750 4265851 16 165 9.5 5.0 7.2 2.0 266 chr2L 4265585 intergenic not near genes chr2L 4265718 intergenic not near genes chr2L 4265851 intergenic not near genes chr2L_16_4265001 chr2L_4265001 CanS-SH 102 chr2L 4351399 4351468 chr2L 4351550 4351619 19 151 3.5 6.5 5.0 3.2 220 chr2L 4351399 5` UTR CR44700 + chr2L 4351509 intergenic CR44700 + chr2L 4351619 intergenic CR44700 + chr2L_19_4350001 chr2L_4350001 CanS-SH 103 chr2L 4601640 4601678 chr2L 4609156 4609194 mdg1 13 7516 10.0 4.0 7.0 1.6 7554 chr2L 4601640 intron dp - chr2L 4605417 intron dp - chr2L 4609194 intron dp - chr2L_13_4605001 chr2L_4605001 CanS-SH 104 chr2L 4661773 4661797 chr2L 4669428 4669452 opus 11 7655 16.5 9.5 13.0 0.8 7679 chr2L 4661773 intergenic not near genes chr2L 4665612 intergenic not near genes chr2L 4669452 intergenic not near genes chr2L_11_4665001 chr2L_4665001 CanS-SH 105 chr2L 4681227 4681261 chr2L 4681566 4681600 13 339 16.5 7.5 12.0 1.0 373 chr2L 4681227 intergenic not near genes chr2L 4681414 intergenic not near genes chr2L 4681600 intergenic not near genes chr2L_13_4680001 chr2L_4680001 CanS-SH 106 chr2L 4740356 4740401 chr2L 4740742 4740787 19 386 5.0 5.5 5.2 3.1 431 chr2L 4740356 intron CG15630 - chr2L 4740572 intron CG15630 - chr2L 4740787 intron CG15630 - chr2L_19_4740001 chr2L_4740001 CanS-SH 107 chr2L 4757639 4757687 chr2L 4757794 4757842 11 155 11.5 3.0 7.2 1.3 203 chr2L 4757639 intron CG15630 - chr2L 4757740 intron CG15630 - chr2L 4757842 intron CG15630 - chr2L_11_4755001 chr2L_4755001 CanS-SH 108 chr2L 4793273 4793322 chr2L 4793643 4793692 6 370 9.0 12.5 10.8 0.5 419 chr2L 4793273 intron CG15630 - chr2L 4793482 intron CG15630 - chr2L 4793692 5` UTR CG15630 - chr2L_6_4790001 chr2L_4790001 CanS-SH 109 chr2L 4819430 4819519 chr2L 4819628 4819717 11 198 5.0 6.0 5.5 1.7 287 chr2L 4819430 intergenic not near genes chr2L 4819574 intergenic not near genes chr2L 4819717 intergenic not near genes chr2L_11_4815001 chr2L_4815001 CanS-SH 110 chr2L 4918106 4918162 chr2L 4923254 4923348 jockey 8 5172 9.0 0.0 4.5 1.5 5242 chr2L 4918106 intron hoe1 - chr2L 4920727 intron hoe1 - chr2L 4923348 intron hoe1 - chr2L_8_4920001 chr2L_4920001 CanS-SH 111 chr2L 5005394 5005461 chr2L 5005556 5005623 16 162 6.5 7.5 7.0 2.0 229 chr2L 5005394 intron Rtnl1 - chr2L 5005508 intron Rtnl1 - chr2L 5005623 intron Rtnl1 - chr2L_16_5005001 chr2L_5005001 CanS-SH 112 chr2L 5027916 5027971 chr2L 5028075 5028130 14 159 0.0 11.0 5.5 2.2 214 chr2L 5027916 intron vkg - chr2L 5028023 intron vkg - chr2L 5028130 5` UTR vkg - chr2L_14_5025001 chr2L_5025001 CanS-SH 113 chr2L 5084970 5085069 chr2L 5085137 5085223 18 165 1.0 6.5 3.8 3.8 253 chr2L 5084970 intron pgant5 - chr2L 5085096 intron pgant5 - chr2L 5085223 intron pgant5 - chr2L_18_5085001 chr2L_5085001 CanS-SH 114 chr2L 5104486 5104531 chr2L 5104652 5104698 11 167 8.5 0.0 4.2 2.1 212 chr2L 5104486 intron Msp300 + chr2L 5104592 intron Msp300 + chr2L 5104698 intron Msp300 + chr2L_11_5100001 chr2L_5100001 CanS-SH 115 chr2L 5106579 5106665 chr2L 5106964 5107049 13 384 5.0 2.5 3.8 2.7 470 chr2L 5106579 intron Msp300 + chr2L 5106814 intron Msp300 + chr2L 5107049 intron Msp300 + chr2L_13_5105001 chr2L_5105001 CanS-SH 116 chr2L 5117228 5117318 chr2L 5117385 5117475 33 157 5.5 6.0 5.8 4.9 247 chr2L 5117228 intron Msp300 + chr2L 5117352 intron Msp300 + chr2L 5117475 intron Msp300 + chr2L_33_5115001 chr2L_5115001 CanS-SH 117 chr2L 5119036 5119043 chr2L 5119199 5119206 6 163 0.0 11.0 5.5 0.9 170 chr2L 5119036 intron Msp300 + chr2L 5119121 intron Msp300 + chr2L 5119206 intron Msp300 + chr2L_6_5115001 chr2L_5115001 CanS-SH 118 chr2L 5120907 5120999 chr2L 5121076 5121161 23 169 9.0 7.0 8.0 2.6 254 chr2L 5120907 intron Msp300 + chr2L 5121034 intron Msp300 + chr2L 5121161 intron Msp300 + chr2L_23_5120001 chr2L_5120001 CanS-SH 119 chr2L 5342708 5342747 chr2L 5345163 5345202 Doc 12 2455 15.0 10.0 12.5 0.9 2494 chr2L 5342708 intergenic CG12512 - chr2L 5343955 intergenic not near genes chr2L 5345202 intergenic not near genes chr2L_12_5340001 chr2L_5340001 CanS-SH 120 chr2L 5378359 5378445 chr2L 5378513 5378599 32 154 14.5 11.0 12.8 2.3 240 chr2L 5378359 intergenic not near genes chr2L 5378479 intergenic not near genes chr2L 5378599 intergenic CR42850 - chr2L_32_5375001 chr2L_5375001 CanS-SH 121 chr2L 5397970 5398038 chr2L 5398126 5398193 18 155 7.0 12.0 9.5 1.7 223 chr2L 5397970 intergenic not near genes chr2L 5398082 intergenic not near genes chr2L 5398193 intergenic not near genes chr2L_18_5395001 chr2L_5395001 CanS-SH 122 chr2L 5403095 5403127 chr2L 5403263 5403294 9 168 10.5 0.0 5.2 1.5 199 chr2L 5403095 intergenic not near genes chr2L 5403194 intergenic not near genes chr2L 5403294 intergenic not near genes chr2L_9_5400001 chr2L_5400001 CanS-SH 123 chr2L 5459890 5459932 chr2L 5460047 5460089 17 157 7.0 11.0 9.0 1.7 199 chr2L 5459890 intergenic not near genes chr2L 5459990 intergenic not near genes chr2L 5460089 intergenic not near genes chr2L_17_5455001 chr2L_5455001 CanS-SH 124 chr2L 5475082 5475163 chr2L 5475262 5475341 19 180 5.5 9.5 7.5 2.2 259 chr2L 5475082 intergenic not near genes chr2L 5475212 intergenic not near genes chr2L 5475341 intergenic not near genes chr2L_19_5475001 chr2L_5475001 CanS-SH 125 chr2L 5487944 5488031 chr2L 5488099 5488186 21 155 7.5 0.5 4.0 4.2 242 chr2L 5487944 intergenic not near genes chr2L 5488065 intergenic not near genes chr2L 5488186 intergenic not near genes chr2L_21_5485001 chr2L_5485001 CanS-SH 126 chr2L 5599558 5599645 chr2L 5599753 5599840 13 195 2.0 5.0 3.5 2.9 282 chr2L 5599558 intergenic not near genes chr2L 5599699 intergenic not near genes chr2L 5599840 intergenic not near genes chr2L_13_5595001 chr2L_5595001 CanS-SH 127 chr2L 5646620 5646673 chr2L 5646775 5646828 16 155 13.0 11.5 12.2 1.2 208 chr2L 5646620 intron CG31646 - chr2L 5646724 intron CG31646 - chr2L 5646828 intron CG31646 - chr2L_16_5645001 chr2L_5645001 CanS-SH 128 chr2L 5657377 5657388 chr2L 5657580 5657591 6 203 23.5 5.5 14.5 0.4 214 chr2L 5657377 intron CG31646 - chr2L 5657484 intron CG31646 - chr2L 5657591 intron CG31646 - chr2L_6_5655001 chr2L_5655001 CanS-SH 129 chr2L 5666219 5666323 chr2L 5666382 5666488 12 165 5.5 6.5 6.0 1.7 269 chr2L 5666219 intron Hsp60C + chr2L 5666354 intron Hsp60C + chr2L 5666488 intron Hsp60C + chr2L_12_5665001 chr2L_5665001 CanS-SH 130 chr2L 5695798 5695862 chr2L 5695965 5696029 20 167 1.5 7.0 4.2 3.8 231 chr2L 5695798 intergenic not near genes chr2L 5695914 intergenic not near genes chr2L 5696029 intergenic not near genes chr2L_20_5695001 chr2L_5695001 CanS-SH 131 chr2L 5720206 5720276 chr2L 5720368 5720438 26 162 10.0 6.0 8.0 2.9 232 chr2L 5720206 intron CG11149 - chr2L 5720322 intron CG11149 - chr2L 5720438 intron CG11149 - chr2L_26_5720001 chr2L_5720001 CanS-SH 132 chr2L 5805984 5806073 chr2L 5806139 5806228 29 155 7.5 5.0 6.2 4.0 244 chr2L 5805984 intron CG11034 + chr2L 5806106 intron CG11034 + chr2L 5806228 intron CG11034 + chr2L_29_5805001 chr2L_5805001 CanS-SH 133 chr2L 5814623 5814714 chr2L 5814781 5814872 24 158 6.0 7.0 6.5 3.2 249 chr2L 5814623 intergenic not near genes chr2L 5814748 intergenic not near genes chr2L 5814872 intergenic not near genes chr2L_24_5810001 chr2L_5810001 CanS-SH 134 chr2L 5827655 5827684 chr2L 5836738 5836767 roo 12 9083 19.0 8.0 13.5 0.8 9112 chr2L 5827655 intron TrissinR + chr2L 5832211 intron TrissinR + chr2L 5836767 intron TrissinR + chr2L_12_5830001 chr2L_5830001 CanS-SH 135 chr2L 5870491 5870496 chr2L 5870643 5870648 5 152 9.5 24.0 16.8 0.3 157 chr2L 5870491 intron rau - chr2L 5870570 intron rau - chr2L 5870648 intron rau - chr2L_5_5870001 chr2L_5870001 CanS-SH 136 chr2L 5897539 5897611 chr2L 5897697 5897769 30 158 10.5 14.0 12.2 2.3 230 chr2L 5897539 intergenic not near genes chr2L 5897654 intergenic not near genes chr2L 5897769 intergenic not near genes chr2L_30_5895001 chr2L_5895001 CanS-SH 137 chr2L 5904388 5904420 chr2L 5904543 5904575 14 155 10.5 4.5 7.5 1.6 187 chr2L 5904388 exon CG9021 - chr2L 5904482 intron CG9021 - chr2L 5904575 intron CG9021 - chr2L_14_5900001 chr2L_5900001 CanS-SH 138 chr2L 5922736 5922912 chr2L 5922900 5923079 11 165 0.0 0.0 0.0 11.0 343 chr2L 5922736 3` UTR bchs + chr2L 5922908 3` UTR CG9016 - chr2L 5923079 3` UTR CG9016 - chr2L_11_5920001 chr2L_5920001 CanS-SH 139 chr2L 5940967 5940997 chr2L 5941152 5941182 6 185 1.0 23.0 12.0 0.5 215 chr2L 5940967 intergenic not near genes chr2L 5941074 intergenic not near genes chr2L 5941182 intergenic not near genes chr2L_6_5940001 chr2L_5940001 CanS-SH 140 chr2L 5941955 5942050 chr2L 5942122 5942217 36 167 5.0 4.0 4.5 6.5 262 chr2L 5941955 intergenic CR45289 + chr2L 5942086 5` UTR CR45289 + chr2L 5942217 5` UTR CR45289 + chr2L_36_5940001 chr2L_5940001 CanS-SH 141 chr2L 5962214 5962279 chr2L 5962365 5962430 19 151 9.5 9.0 9.2 1.9 216 chr2L 5962214 intergenic not near genes chr2L 5962322 intergenic not near genes chr2L 5962430 intergenic not near genes chr2L_19_5960001 chr2L_5960001 CanS-SH 142 chr2L 5974542 5974625 chr2L 5974815 5974887 10 272 0.0 3.0 1.5 4.0 345 chr2L 5974542 intron chic - chr2L 5974714 intron chic - chr2L 5974887 intron chic - chr2L_10_5970001 chr2L_5970001 CanS-SH 143 chr2L 5988962 5989065 chr2L 5989113 5989224 35 152 7.5 2.5 5.0 5.8 262 chr2L 5988962 intergenic ifc +,lid - chr2L 5989093 intergenic ifc +,lid - chr2L 5989224 intergenic lid -,ifc + chr2L_35_5985001 chr2L_5985001 CanS-SH 144 chr2L 5993264 5993343 chr2L 5993430 5993509 25 166 8.0 8.5 8.2 2.7 245 chr2L 5993264 exon lid - chr2L 5993386 intron lid - chr2L 5993509 exon lid - chr2L_25_5990001 chr2L_5990001 CanS-SH 145 chr2L 6007020 6007123 chr2L 6007171 6007274 14 151 8.5 6.5 7.5 1.6 254 chr2L 6007020 intergenic Gal -,CG9098 - chr2L 6007147 intergenic CG9098 -,Gal - chr2L 6007274 intergenic CG9098 -,Gal - chr2L_14_6005001 chr2L_6005001 CanS-SH 146 chr2L 6050376 6050465 chr2L 6050555 6050644 16 179 5.5 7.0 6.2 2.2 268 chr2L 6050376 3` UTR CG12393 + chr2L 6050510 intergenic CG12393 +,CG9135 + chr2L 6050644 intergenic CG9135 +,CG12393 + chr2L_16_6050001 chr2L_6050001 CanS-SH 147 chr2L 6079436 6079505 chr2L 6079593 6079662 16 157 12.0 0.0 6.0 2.3 226 chr2L 6079436 5` UTR CR9162 + chr2L 6079549 5` UTR CR9162 + chr2L 6079662 5` UTR CR9162 + chr2L_16_6075001 chr2L_6075001 CanS-SH 148 chr2L 6136481 6136575 chr2L 6136653 6136747 19 172 8.5 8.5 8.5 2.0 266 chr2L 6136481 intergenic not near genes chr2L 6136614 intergenic not near genes chr2L 6136747 intergenic not near genes chr2L_19_6135001 chr2L_6135001 CanS-SH 149 chr2L 6138660 6138747 chr2L 6138851 6138934 21 190 6.5 6.5 6.5 2.8 274 chr2L 6138660 intergenic CR44824 - chr2L 6138797 intergenic CR44824 - chr2L 6138934 3` UTR CR44824 - chr2L_21_6135001 chr2L_6135001 CanS-SH 150 chr2L 6154387 6154442 chr2L 6154538 6154593 10 151 9.0 5.0 7.0 1.2 206 chr2L 6154387 intron CG31639 - chr2L 6154490 intron CG31639 - chr2L 6154593 intron CG31639 - chr2L_10_6150001 chr2L_6150001 CanS-SH 151 chr2L 6185857 6185945 chr2L 6186012 6186100 27 155 10.0 9.0 9.5 2.6 243 chr2L 6185857 intron CG34380 + chr2L 6185978 intron CG34380 + chr2L 6186100 intron CG34380 + chr2L_27_6185001 chr2L_6185001 CanS-SH 152 chr2L 6225193 6225269 chr2L 6225356 6225432 21 163 8.5 10.5 9.5 2.0 239 chr2L 6225193 exon Ugt37b1 + chr2L 6225312 exon Ugt37b1 + chr2L 6225432 exon Ugt37b1 + chr2L_21_6225001 chr2L_6225001 CanS-SH 153 chr2L 6242904 6242985 chr2L 6243077 6243158 16 173 4.0 5.0 4.5 2.9 254 chr2L 6242904 intergenic not near genes chr2L 6243031 intergenic not near genes chr2L 6243158 intergenic not near genes chr2L_16_6240001 chr2L_6240001 CanS-SH 154 chr2L 6261521 6261615 chr2L 6261745 6261842 7 226 5.5 5.5 5.5 1.1 321 chr2L 6261521 intron Ddr + chr2L 6261682 intron Ddr + chr2L 6261842 intron Ddr + chr2L_7_6260001 chr2L_6260001 CanS-SH 155 chr2L 6279576 6279643 chr2L 6279730 6279797 INE-1 21 154 12.0 7.0 9.5 2.0 221 chr2L 6279576 intron Ddr + chr2L 6279686 intron Ddr + chr2L 6279797 intron Ddr + chr2L_21_6275001 chr2L_6275001 CanS-SH 156 chr2L 6283894 6283913 chr2L 6284080 6284099 6 186 16.0 0.0 8.0 0.7 205 chr2L 6283894 intron Ddr + chr2L 6283996 intron Ddr + chr2L 6284099 intron Ddr + chr2L_6_6280001 chr2L_6280001 CanS-SH 157 chr2L 6799464 6799563 chr2L 6799627 6799726 15 163 8.0 5.5 6.8 1.9 262 chr2L 6799464 5` UTR CR43610 + chr2L 6799595 5` UTR CR43610 + chr2L 6799726 intergenic CR43610 +,CG17376 - chr2L_15_6795001 chr2L_6795001 CanS-SH 158 chr2L 6818062 6818108 chr2L 6818226 6818272 15 164 10.0 6.0 8.0 1.7 210 chr2L 6818062 intergenic not near genes chr2L 6818167 intergenic not near genes chr2L 6818272 intergenic not near genes chr2L_15_6815001 chr2L_6815001 CanS-SH 159 chr2L 6876718 6876747 chr2L 6882984 6883013 diver 6 6266 13.5 4.0 8.8 0.6 6295 chr2L 6876718 intron Nlg2 + chr2L 6879866 intron Nlg2 + chr2L 6883013 intron Nlg2 + chr2L_6_6875001 chr2L_6875001 CanS-SH 160 chr2L 6887474 6887529 chr2L 6887701 6887756 6 227 6.0 9.0 7.5 0.7 282 chr2L 6887474 intron Nlg2 + chr2L 6887615 intron Nlg2 + chr2L 6887756 intron Nlg2 + chr2L_6_6885001 chr2L_6885001 CanS-SH 161 chr2L 6991371 6991402 chr2L 6998565 6998596 HMS-Beagle 7 7194 24.5 3.0 13.8 0.5 7225 chr2L 6991371 intron uif - chr2L 6994984 intron uif - chr2L 6998596 intron uif - chr2L_7_6990001 chr2L_6990001 CanS-SH 162 chr2L 7005155 7005248 chr2L 7005326 7005419 17 171 8.5 9.0 8.8 1.7 264 chr2L 7005155 intron uif - chr2L 7005287 intron uif - chr2L 7005419 intron uif - chr2L_17_7005001 chr2L_7005001 CanS-SH 163 chr2L 7043465 7043532 chr2L 7043627 7043694 19 162 9.0 12.0 10.5 1.7 229 chr2L 7043465 intron milt + chr2L 7043580 intron milt + chr2L 7043694 intron milt + chr2L_19_7040001 chr2L_7040001 CanS-SH 164 chr2L 7111688 7111788 chr2L 7111849 7111949 24 161 3.5 2.0 2.8 6.3 261 chr2L 7111688 intron Pvf3 - chr2L 7111818 intron Pvf3 - chr2L 7111949 intron Pvf3 - chr2L_24_7110001 chr2L_7110001 CanS-SH 165 chr2L 7114918 7115017 chr2L 7115134 7115221 4 214 0.0 5.0 2.5 1.1 303 chr2L 7114918 intron Pvf3 - chr2L 7115070 intron Pvf3 - chr2L 7115221 intron Pvf3 - chr2L_4_7115001 chr2L_7115001 CanS-SH 166 chr2L 7125730 7125810 chr2L 7125921 7126001 16 191 2.5 6.5 4.5 2.9 271 chr2L 7125730 intron Pvf3 - chr2L 7125866 intron Pvf3 - chr2L 7126001 intron Pvf3 - chr2L_16_7125001 chr2L_7125001 CanS-SH 167 chr2L 7159670 7159722 chr2L 7159845 7159897 7 175 4.5 11.5 8.0 0.8 227 chr2L 7159670 intergenic not near genes chr2L 7159784 intergenic not near genes chr2L 7159897 intergenic not near genes chr2L_7_7155001 chr2L_7155001 CanS-SH 168 chr2L 7254452 7254522 chr2L 7254616 7254674 13 161 7.0 7.5 7.2 1.6 222 chr2L 7254452 intergenic not near genes chr2L 7254563 intergenic not near genes chr2L 7254674 intergenic not near genes chr2L_13_7250001 chr2L_7250001 CanS-SH 169 chr2L 7263601 7263658 chr2L 7263780 7263837 16 179 15.0 6.0 10.5 1.4 236 chr2L 7263601 intron Wnt4 - chr2L 7263719 intron Wnt4 - chr2L 7263837 intron Wnt4 - chr2L_16_7260001 chr2L_7260001 CanS-SH 170 chr2L 7325858 7325918 chr2L 7326018 7326077 20 160 6.0 5.0 5.5 3.1 219 chr2L 7325858 intergenic not near genes chr2L 7325968 intergenic not near genes chr2L 7326077 intergenic not near genes chr2L_20_7325001 chr2L_7325001 CanS-SH 171 chr2L 7343275 7343303 chr2L 7350466 7350494 roo 12 7191 11.5 13.0 12.2 0.9 7219 chr2L 7343275 intron Wnt6 + chr2L 7346884 intron Wnt6 + chr2L 7350494 intron Wnt6 + chr2L_12_7345001 chr2L_7345001 CanS-SH 172 chr2L 7350875 7350879 chr2L 7351027 7351031 4 152 8.5 6.0 7.2 0.5 156 chr2L 7350875 intron Wnt6 + chr2L 7350953 intron Wnt6 + chr2L 7351031 intron Wnt6 + chr2L_4_7350001 chr2L_7350001 CanS-SH 173 chr2L 7432166 7432243 chr2L 7432323 7432400 32 157 7.0 5.0 6.0 4.6 234 chr2L 7432166 intron CG5958 - chr2L 7432283 intron CG5958 - chr2L 7432400 intron CG5958 - chr2L_32_7430001 chr2L_7430001 CanS-SH 174 chr2L 7454230 7454263 chr2L 7454513 7454546 5 283 5.0 9.5 7.2 0.6 316 chr2L 7454230 intergenic Gr28a - chr2L 7454388 intergenic Gr28a -,Gr28b - chr2L 7454546 intergenic Gr28b -,Gr28a - chr2L_5_7450001 chr2L_7450001 CanS-SH 175 chr2L 7454628 7454680 chr2L 7454788 7454841 12 160 7.5 6.5 7.0 1.5 213 chr2L 7454628 intergenic Gr28b -,Gr28a - chr2L 7454734 intergenic Gr28b - chr2L 7454841 3` UTR Gr28b - chr2L_12_7450001 chr2L_7450001 CanS-SH 176 chr2L 7494439 7494447 chr2L 7494590 7494598 6 151 16.5 4.0 10.2 0.5 159 chr2L 7494439 intron Ziz - chr2L 7494518 intron Ziz - chr2L 7494598 intron Ziz - chr2L_6_7490001 chr2L_7490001 CanS-SH 177 chr2L 7502670 7502678 chr2L 7502821 7502829 5 151 14.5 8.5 11.5 0.4 159 chr2L 7502670 intron RapGAP1 - chr2L 7502750 intron RapGAP1 - chr2L 7502829 intron RapGAP1 - chr2L_5_7500001 chr2L_7500001 CanS-SH 178 chr2L 7548041 7548057 chr2L 7550556 7550572 Burdock 6 2515 14.5 11.0 12.8 0.4 2531 chr2L 7548041 intron RapGAP1 - chr2L 7549306 intron RapGAP1 - chr2L 7550572 intron RapGAP1 - chr2L_6_7545001 chr2L_7545001 CanS-SH 179 chr2L 7555191 7555234 chr2L 7555343 7555386 7 152 1.5 18.5 10.0 0.6 195 chr2L 7555191 intron RapGAP1 - chr2L 7555288 intron RapGAP1 - chr2L 7555386 intron RapGAP1 - chr2L_7_7555001 chr2L_7555001 CanS-SH 180 chr2L 7567477 7567506 chr2L 7567629 7567658 15 152 5.5 20.0 12.8 1.1 181 chr2L 7567477 intron RapGAP1 - chr2L 7567568 intron RapGAP1 - chr2L 7567658 intron RapGAP1 - chr2L_15_7565001 chr2L_7565001 CanS-SH 181 chr2L 7581464 7581471 chr2L 7581628 7581635 4 164 8.5 7.0 7.8 0.5 171 chr2L 7581464 intergenic Spn28B + chr2L 7581550 intergenic Spn28B + chr2L 7581635 intergenic Spn28B + chr2L_4_7580001 chr2L_7580001 CanS-SH 182 chr2L 7603019 7603109 chr2L 7603174 7603264 22 155 7.0 8.0 7.5 2.6 245 chr2L 7603019 intergenic not near genes chr2L 7603142 intergenic not near genes chr2L 7603264 intergenic not near genes chr2L_22_7600001 chr2L_7600001 CanS-SH 183 chr2L 7640393 7640422 chr2L 7640556 7640586 6 164 5.0 6.5 5.8 0.9 193 chr2L 7640393 intergenic not near genes chr2L 7640490 intergenic not near genes chr2L 7640586 intergenic not near genes chr2L_6_7640001 chr2L_7640001 CanS-SH 184 chr2L 7717799 7717869 chr2L 7717967 7718037 17 168 10.5 10.0 10.2 1.5 238 chr2L 7717799 intron CG13793 - chr2L 7717918 exon CG13793 - chr2L 7718037 intron CG13793 - chr2L_17_7715001 chr2L_7715001 CanS-SH 185 chr2L 7769545 7769624 chr2L 7769772 7769851 17 227 7.5 9.5 8.5 1.8 306 chr2L 7769545 intron CG7191 + chr2L 7769698 intron CG7191 + chr2L 7769851 intron CG7191 + chr2L_17_7765001 chr2L_7765001 CanS-SH 186 chr2L 7770541 7770642 chr2L 7770822 7770924 6 282 4.0 0.0 2.0 2.0 383 chr2L 7770541 intron CG7191 + chr2L 7770732 intron CG7191 + chr2L 7770924 intron CG7191 + chr2L_6_7770001 chr2L_7770001 CanS-SH 187 chr2L 7781273 7781285 chr2L 7781435 7781447 4 162 0.0 4.5 2.2 1.2 174 chr2L 7781273 3` UTR Uro + chr2L 7781360 3` UTR Uro + chr2L 7781447 intergenic CG7164 +,Uro + chr2L_4_7780001 chr2L_7780001 CanS-SH 188 chr2L 7850924 7850991 chr2L 7851112 7851179 9 188 7.5 13.5 10.5 0.8 255 chr2L 7850924 intron CG14535 - chr2L 7851052 intron CG14535 - chr2L 7851179 intron CG14535 - chr2L_9_7850001 chr2L_7850001 CanS-SH 189 chr2L 7862990 7863075 chr2L 7863817 7863902 25 827 9.5 6.5 8.0 2.8 912 chr2L 7862990 intergenic not near genes chr2L 7863446 intergenic not near genes chr2L 7863902 intergenic not near genes chr2L_25_7860001 chr2L_7860001 CanS-SH 190 chr2L 7867509 7867567 chr2L 7867678 7867736 18 169 12.5 0.0 6.2 2.5 227 chr2L 7867509 intron Proc - chr2L 7867622 intron Proc - chr2L 7867736 intron Proc - chr2L_18_7865001 chr2L_7865001 CanS-SH 191 chr2L 7873046 7873076 chr2L 7873203 7873233 14 157 12.5 6.5 9.5 1.3 187 chr2L 7873046 intergenic spz3 - chr2L 7873140 intergenic spz3 - chr2L 7873233 intergenic spz3 - chr2L_14_7870001 chr2L_7870001 CanS-SH 192 chr2L 7941126 7941196 chr2L 7941280 7941350 16 154 9.5 7.0 8.2 1.7 224 chr2L 7941126 intron Snoo - chr2L 7941238 intron Snoo - chr2L 7941350 intron Snoo - chr2L_16_7940001 chr2L_7940001 CanS-SH 193 chr2L 7958977 7959073 chr2L 7960463 7960561 pogo 15 1487 6.0 4.5 5.2 2.4 1584 chr2L 7958977 intron Snoo - chr2L 7959769 intron Snoo - chr2L 7960561 intron Snoo - chr2L_15_7955001 chr2L_7955001 CanS-SH 194 chr2L 7968386 7968428 chr2L 7968542 7968585 7 157 4.5 4.0 4.2 1.3 199 chr2L 7968386 intron Snoo - chr2L 7968486 intron Snoo - chr2L 7968585 intron Snoo - chr2L_7_7965001 chr2L_7965001 CanS-SH 195 chr2L 7977027 7977065 chr2L 7984078 7984114 297 15 7051 10.5 10.5 10.5 1.3 7087 chr2L 7977027 intron Snoo - chr2L 7980570 intron Snoo - chr2L 7984114 intron,5` UTR Snoo -,CG7231 + chr2L_15_7980001 chr2L_7980001 CanS-SH 196 chr2L 7986855 7986873 chr2L 7987016 7987035 4 162 9.5 10.0 9.8 0.4 180 chr2L 7986855 3` UTR pes - chr2L 7986945 3` UTR pes - chr2L 7987035 3` UTR pes - chr2L_4_7985001 chr2L_7985001 CanS-SH 197 chr2L 7994338 7994382 chr2L 7994656 7994700 20 318 10.0 10.0 10.0 1.8 362 chr2L 7994338 intergenic CG7227 -,pes -,CR44996 + chr2L 7994519 3` UTR CG7227 - chr2L 7994700 3` UTR CG7227 - chr2L_20_7990001 chr2L_7990001 CanS-SH 198 chr2L 8002978 8003049 chr2L 8003135 8003206 15 157 1.5 8.0 4.8 2.6 228 chr2L 8002978 intron Wwox - chr2L 8003092 intron Wwox - chr2L 8003206 intron Wwox - chr2L_15_8000001 chr2L_8000001 CanS-SH 199 chr2L 8013597 8013617 chr2L 8023607 8023627 copia 5 10010 9.0 11.0 10.0 0.5 10030 chr2L 8013597 intron Tg + chr2L 8018612 intron Tg + chr2L 8023627 intron Tg + chr2L_5_8015001 chr2L_8015001 CanS-SH 200 chr2L 8034533 8034585 chr2L 8034709 8034761 13 176 14.0 11.0 12.5 1.0 228 chr2L 8034533 intron,intron CG7367 -,Cka + chr2L 8034647 intron,intron CG7367 -,Cka + chr2L 8034761 intron,intron CG7367 -,Cka + chr2L_13_8030001 chr2L_8030001 CanS-SH 201 chr2L 8167086 8167151 chr2L 8167252 8167317 21 166 11.0 8.0 9.5 2.0 231 chr2L 8167086 intron Piezo + chr2L 8167202 intron Piezo + chr2L 8167317 intron Piezo + chr2L_21_8165001 chr2L_8165001 CanS-SH 202 chr2L 8244685 8244750 chr2L 8244882 8244947 10 197 5.5 9.0 7.2 1.2 262 chr2L 8244685 intron CG8086 - chr2L 8244816 intron CG8086 - chr2L 8244947 intron CG8086 - chr2L_10_8240001 chr2L_8240001 CanS-SH 203 chr2L 8286234 8286308 chr2L 8286396 8286470 19 162 8.0 5.5 6.8 2.4 236 chr2L 8286234 intron Btk29A - chr2L 8286352 intron Btk29A - chr2L 8286470 intron Btk29A - chr2L_19_8285001 chr2L_8285001 CanS-SH 204 chr2L 8288610 8288678 chr2L 8288780 8288849 18 170 11.0 8.0 9.5 1.7 239 chr2L 8288610 intron Btk29A - chr2L 8288730 intron Btk29A - chr2L 8288849 intron Btk29A - chr2L_18_8285001 chr2L_8285001 CanS-SH 205 chr2L 8336859 8336926 chr2L 8337013 8337080 9 154 2.5 7.0 4.8 1.6 221 chr2L 8336859 intergenic not near genes chr2L 8336970 intergenic not near genes chr2L 8337080 intergenic not near genes chr2L_9_8335001 chr2L_8335001 CanS-SH 206 chr2L 8389764 8389807 chr2L 8389916 8389958 12 152 2.5 11.5 7.0 1.5 194 chr2L 8389764 5` UTR snRNA:U6atac:29B + chr2L 8389861 intergenic CG42820 -,snRNA:U6atac:29B + chr2L 8389958 3` UTR CG42820 - chr2L_12_8385001 chr2L_8385001 CanS-SH 207 chr2L 8451771 8451861 chr2L 8451961 8452051 19 190 4.0 5.0 4.5 3.5 280 chr2L 8451771 5` UTR fu12 - chr2L 8451911 intron fu12 - chr2L 8452051 intron fu12 - chr2L_19_8450001 chr2L_8450001 CanS-SH 208 chr2L 8452366 8452390 chr2L 8461612 8461636 roo 10 9246 7.5 14.0 10.8 0.8 9270 chr2L 8452366 intron fu12 - chr2L 8457001 intron fu12 - chr2L 8461636 intron fu12 - chr2L_10_8455001 chr2L_8455001 CanS-SH 209 chr2L 8588488 8588545 chr2L 8588654 8588711 26 166 10.5 10.0 10.2 2.3 223 chr2L 8588488 intron Sema-1a + chr2L 8588600 intron Sema-1a + chr2L 8588711 intron Sema-1a + chr2L_26_8585001 chr2L_8585001 CanS-SH 210 chr2L 8594405 8594436 chr2L 8601534 8601565 297 8 7129 14.0 8.0 11.0 0.7 7160 chr2L 8594405 intron,3` UTR Sema-1a +,CR43855 - chr2L 8597985 intron Sema-1a + chr2L 8601565 intron Sema-1a + chr2L_8_8595001 chr2L_8595001 CanS-SH 211 chr2L 8612782 8612854 chr2L 8612934 8613006 21 152 11.0 11.5 11.2 1.7 224 chr2L 8612782 intron Sema-1a + chr2L 8612894 intron Sema-1a + chr2L 8613006 intron Sema-1a + chr2L_21_8610001 chr2L_8610001 CanS-SH 212 chr2L 8661543 8661626 chr2L 8662066 8662149 13 523 54.5 56.5 55.5 0.2 606 chr2L 8661543 intron Sema-1a + chr2L 8661846 intron Sema-1a + chr2L 8662149 intron Sema-1a + chr2L_13_8660001 chr2L_8660001 CanS-SH 213 chr2L 8723050 8723091 chr2L 8731502 8731543 Tirant 10 8452 12.0 7.5 9.8 0.9 8493 chr2L 8723050 intron raw - chr2L 8727296 intron raw - chr2L 8731543 intron raw - chr2L_10_8725001 chr2L_8725001 CanS-SH 214 chr2L 8736192 8736258 chr2L 8736347 8736413 19 155 0.0 7.5 3.8 4.0 221 chr2L 8736192 intron raw - chr2L 8736302 intron raw - chr2L 8736413 intron raw - chr2L_19_8735001 chr2L_8735001 CanS-SH 215 chr2L 8784643 8784725 chr2L 8784829 8784910 16 186 7.5 6.5 7.0 2.0 267 chr2L 8784643 intergenic not near genes chr2L 8784776 intergenic not near genes chr2L 8784910 intergenic not near genes chr2L_16_8780001 chr2L_8780001 CanS-SH 216 chr2L 8786488 8786572 chr2L 8786639 8786734 19 157 4.5 5.5 5.0 3.2 246 chr2L 8786488 intergenic not near genes chr2L 8786611 intergenic not near genes chr2L 8786734 intergenic not near genes chr2L_19_8785001 chr2L_8785001 CanS-SH 217 chr2L 8788727 8788779 chr2L 8788893 8788945 5 166 6.5 9.5 8.0 0.6 218 chr2L 8788727 intergenic not near genes chr2L 8788836 intergenic not near genes chr2L 8788945 intergenic not near genes chr2L_5_8785001 chr2L_8785001 CanS-SH 218 chr2L 8791254 8791297 chr2L 8791406 8791449 10 152 6.5 7.0 6.8 1.3 195 chr2L 8791254 intergenic not near genes chr2L 8791352 intergenic not near genes chr2L 8791449 intergenic not near genes chr2L_10_8790001 chr2L_8790001 CanS-SH 219 chr2L 8799736 8799787 chr2L 8799927 8799978 10 191 10.0 6.0 8.0 1.1 242 chr2L 8799736 intergenic not near genes chr2L 8799857 intergenic not near genes chr2L 8799978 intergenic not near genes chr2L_10_8795001 chr2L_8795001 CanS-SH 220 chr2L 8885847 8885882 chr2L 8886009 8886044 15 162 6.5 5.5 6.0 2.1 197 chr2L 8885847 intergenic not near genes chr2L 8885946 intergenic not near genes chr2L 8886044 intergenic not near genes chr2L_15_8885001 chr2L_8885001 CanS-SH 221 chr2L 8956207 8956242 chr2L 8956358 8956393 17 151 6.0 12.5 9.2 1.7 186 chr2L 8956207 intron CG31886 - chr2L 8956300 intron CG31886 - chr2L 8956393 intron CG31886 - chr2L_17_8955001 chr2L_8955001 CanS-SH 222 chr2L 8976173 8976245 chr2L 8976324 8976412 15 165 0.0 4.5 2.2 4.7 239 chr2L 8976173 intergenic not near genes chr2L 8976292 intergenic not near genes chr2L 8976412 intergenic not near genes chr2L_15_8975001 chr2L_8975001 CanS-SH 223 chr2L 8980399 8980491 chr2L 8980563 8980656 10 164 7.0 0.0 3.5 2.2 257 chr2L 8980399 intron CG13101 - chr2L 8980528 intron CG13101 - chr2L 8980656 intron CG13101 - chr2L_10_8980001 chr2L_8980001 CanS-SH 224 chr2L 9000251 9000313 chr2L 9007836 9007906 roo 13 7590 8.5 2.0 5.2 2.1 7655 chr2L 9000251 intergenic Try29F + chr2L 9004078 intergenic not near genes chr2L 9007906 intergenic not near genes chr2L_13_9000001 chr2L_9000001 CanS-SH 225 chr2L 9069618 9069673 chr2L 9069784 9069839 8 166 0.0 9.5 4.8 1.4 221 chr2L 9069618 intron CG31708 - chr2L 9069728 intron CG31708 - chr2L 9069839 intron CG31708 - chr2L_8_9065001 chr2L_9065001 CanS-SH 226 chr2L 9073195 9073277 chr2L 9073357 9073438 23 162 8.0 6.0 7.0 2.9 243 chr2L 9073195 intergenic not near genes chr2L 9073316 intergenic not near genes chr2L 9073438 intergenic not near genes chr2L_23_9070001 chr2L_9070001 CanS-SH 227 chr2L 9114036 9114100 chr2L 9114190 9114254 5 154 5.5 8.0 6.8 0.6 218 chr2L 9114036 intergenic not near genes chr2L 9114145 intergenic not near genes chr2L 9114254 intergenic not near genes chr2L_5_9110001 chr2L_9110001 CanS-SH 228 chr2L 9115570 9115608 chr2L 9115726 9115764 11 156 4.5 4.5 4.5 2.0 194 chr2L 9115570 intergenic not near genes chr2L 9115667 intergenic not near genes chr2L 9115764 intergenic not near genes chr2L_11_9115001 chr2L_9115001 CanS-SH 229 chr2L 9119950 9120017 chr2L 9120103 9120170 16 153 9.5 10.0 9.8 1.5 220 chr2L 9119950 5` UTR CR44617 + chr2L 9120060 intergenic CR44617 + chr2L 9120170 intergenic CR44617 + chr2L_16_9120001 chr2L_9120001 CanS-SH 230 chr2L 9154802 9154904 chr2L 9154965 9155062 16 161 0.0 5.5 2.8 4.2 260 chr2L 9154802 intron CG32982 + chr2L 9154932 intron CG32982 + chr2L 9155062 intron CG32982 + chr2L_16_9150001 chr2L_9150001 CanS-SH 231 chr2L 9158723 9158745 chr2L 9158895 9158917 6 172 18.0 0.0 9.0 0.6 194 chr2L 9158723 intron CG32982 + chr2L 9158820 intron CG32982 + chr2L 9158917 intron CG32982 + chr2L_6_9155001 chr2L_9155001 CanS-SH 232 chr2L 9172999 9173082 chr2L 9173151 9173234 19 152 7.0 6.5 6.8 2.4 235 chr2L 9172999 intron tai + chr2L 9173116 intron tai + chr2L 9173234 intron tai + chr2L_19_9170001 chr2L_9170001 CanS-SH 233 chr2L 9190861 9190925 chr2L 9191025 9191081 10 163 1.0 8.0 4.5 1.8 220 chr2L 9190861 intron tai + chr2L 9190971 intron tai + chr2L 9191081 intron tai + chr2L_10_9190001 chr2L_9190001 CanS-SH 234 chr2L 9195799 9195879 chr2L 9195957 9196036 26 158 8.5 11.0 9.8 2.4 237 chr2L 9195799 intron tai + chr2L 9195918 intron tai + chr2L 9196036 intron tai + chr2L_26_9195001 chr2L_9195001 CanS-SH 235 chr2L 9217918 9217953 chr2L 9222780 9222823 Doc 5 4865 15.5 3.0 9.2 0.5 4905 chr2L 9217918 intron tai + chr2L 9220370 intron tai + chr2L 9222823 intron tai + chr2L_5_9220001 chr2L_9220001 CanS-SH 236 chr2L 9227171 9227248 chr2L 9227329 9227405 7 158 5.5 10.5 8.0 0.8 234 chr2L 9227171 intron tai + chr2L 9227288 intron tai + chr2L 9227405 intron tai + chr2L_7_9225001 chr2L_9225001 CanS-SH 237 chr2L 9233436 9233524 chr2L 9233592 9233676 5 155 0.0 8.5 4.2 1.0 240 chr2L 9233436 intron tai + chr2L 9233556 intron tai + chr2L 9233676 intron tai + chr2L_5_9230001 chr2L_9230001 CanS-SH 238 chr2L 9264291 9264324 chr2L 9264466 9264499 9 175 12.0 9.5 10.8 0.8 208 chr2L 9264291 intron Ggamma30A + chr2L 9264395 intron Ggamma30A + chr2L 9264499 intron Ggamma30A + chr2L_9_9260001 chr2L_9260001 CanS-SH 239 chr2L 9270682 9270760 chr2L 9270852 9270930 25 170 7.5 8.5 8.0 2.8 248 chr2L 9270682 intron Ggamma30A + chr2L 9270806 intron Ggamma30A + chr2L 9270930 intron Ggamma30A + chr2L_25_9270001 chr2L_9270001 CanS-SH 240 chr2L 9274130 9274196 chr2L 9274287 9274353 14 157 10.5 7.0 8.8 1.4 223 chr2L 9274130 intron Ggamma30A + chr2L 9274242 intron Ggamma30A + chr2L 9274353 intron Ggamma30A + chr2L_14_9270001 chr2L_9270001 CanS-SH 241 chr2L 9279916 9279980 chr2L 9280085 9280149 19 169 14.0 4.0 9.0 1.9 233 chr2L 9279916 intron Ggamma30A + chr2L 9280032 intron Ggamma30A + chr2L 9280149 intron Ggamma30A + chr2L_19_9280001 chr2L_9280001 CanS-SH 242 chr2L 9284949 9285028 chr2L 9285100 9285179 20 151 9.0 7.5 8.2 2.2 230 chr2L 9284949 intron Ggamma30A + chr2L 9285064 intron Ggamma30A + chr2L 9285179 intron Ggamma30A + chr2L_20_9285001 chr2L_9285001 CanS-SH 243 chr2L 9287265 9287326 chr2L 9287437 9287498 21 172 11.5 7.5 9.5 2.0 233 chr2L 9287265 intron Ggamma30A + chr2L 9287382 intron Ggamma30A + chr2L 9287498 intron Ggamma30A + chr2L_21_9285001 chr2L_9285001 CanS-SH 244 chr2L 9297310 9297394 chr2L 9297462 9297546 30 152 9.0 6.5 7.8 3.4 236 chr2L 9297310 3` UTR Ggamma30A + chr2L 9297428 3` UTR Ggamma30A + chr2L 9297546 3` UTR Ggamma30A + chr2L_30_9295001 chr2L_9295001 CanS-SH 245 chr2L 9300617 9300707 chr2L 9300788 9300878 11 171 4.5 7.0 5.8 1.6 261 chr2L 9300617 3` UTR Ggamma30A + chr2L 9300748 3` UTR Ggamma30A + chr2L 9300878 3` UTR Ggamma30A + chr2L_11_9300001 chr2L_9300001 CanS-SH 246 chr2L 9304283 9304472 chr2L 9304442 9304626 39 157 0.0 0.0 0.0 39.0 343 chr2L 9304283 intergenic CR42844 - chr2L 9304454 3` UTR CR42844 - chr2L 9304626 3` UTR CR42844 - chr2L_39_9300001 chr2L_9300001 CanS-SH 247 chr2L 9335030 9335066 chr2L 9335225 9335261 18 195 17.5 8.0 12.8 1.3 231 chr2L 9335030 intron Eaat1 + chr2L 9335146 intron Eaat1 + chr2L 9335261 intron Eaat1 + chr2L_18_9335001 chr2L_9335001 CanS-SH 248 chr2L 9385053 9385132 chr2L 9385218 9385297 35 165 10.5 8.5 9.5 3.3 244 chr2L 9385053 intron Shawl - chr2L 9385175 intron Shawl - chr2L 9385297 intron Shawl - chr2L_35_9385001 chr2L_9385001 CanS-SH 249 chr2L 9387187 9387271 chr2L 9387360 9387444 14 173 3.0 7.5 5.2 2.3 257 chr2L 9387187 intron Shawl - chr2L 9387316 intron Shawl - chr2L 9387444 intron,5` UTR Shawl -,Aldh + chr2L_14_9385001 chr2L_9385001 CanS-SH 250 chr2L 9391472 9391509 chr2L 9391714 9391751 10 242 18.0 9.5 13.8 0.7 279 chr2L 9391472 intron,3` UTR Shawl -,Aldh + chr2L 9391612 intron Shawl - chr2L 9391751 intron Shawl - chr2L_10_9390001 chr2L_9390001 CanS-SH 251 chr2L 9393437 9393470 chr2L 9396479 9396512 jockey 13 3042 10.5 9.0 9.8 1.2 3075 chr2L 9393437 intron Shawl - chr2L 9394974 intron Shawl - chr2L 9396512 intron Shawl - chr2L_13_9390001 chr2L_9390001 CanS-SH 252 chr2L 9443017 9443088 chr2L 9443206 9443273 7 187 6.0 7.5 6.8 0.9 256 chr2L 9443017 intron numb + chr2L 9443145 intron numb + chr2L 9443273 intron numb + chr2L_7_9440001 chr2L_9440001 CanS-SH 253 chr2L 9450977 9451035 chr2L 9451155 9451213 9 178 2.0 8.0 5.0 1.5 236 chr2L 9450977 intron numb + chr2L 9451095 intron numb + chr2L 9451213 intron numb + chr2L_9_9450001 chr2L_9450001 CanS-SH 254 chr2L 9454913 9455002 chr2L 9455090 9455181 21 178 7.0 4.0 5.5 3.2 268 chr2L 9454913 intron numb + chr2L 9455047 intron numb + chr2L 9455181 intron numb + chr2L_21_9455001 chr2L_9455001 CanS-SH 255 chr2L 9456856 9456954 chr2L 9457012 9457110 23 156 1.5 5.5 3.5 5.1 254 chr2L 9456856 intron numb + chr2L 9456983 intron numb + chr2L 9457110 intron numb + chr2L_23_9455001 chr2L_9455001 CanS-SH 256 chr2L 9464778 9464930 chr2L 9464930 9465088 9 167 0.0 0.0 0.0 9.0 310 chr2L 9464778 intergenic not near genes chr2L 9464933 intergenic not near genes chr2L 9465088 intergenic not near genes chr2L_9_9460001 chr2L_9460001 CanS-SH 257 chr2L 9527255 9527310 chr2L 9527412 9527467 15 157 0.0 8.0 4.0 3.0 212 chr2L 9527255 intron Oatp30B + chr2L 9527361 intron Oatp30B + chr2L 9527467 intron Oatp30B + chr2L_15_9525001 chr2L_9525001 CanS-SH 258 chr2L 9612782 9612790 chr2L 9612936 9612944 5 154 9.0 0.0 4.5 0.9 162 chr2L 9612782 intergenic gcm2 +,Trx-2 + chr2L 9612863 intergenic gcm2 +,Trx-2 + chr2L 9612944 intergenic Trx-2 +,gcm2 + chr2L_5_9610001 chr2L_9610001 CanS-SH 259 chr2L 9671993 9672009 chr2L 9672153 9672169 16 160 17.0 0.0 8.5 1.7 176 chr2L 9671993 intergenic not near genes chr2L 9672081 intergenic not near genes chr2L 9672169 intergenic not near genes chr2L_16_9670001 chr2L_9670001 CanS-SH 260 chr2L 9673784 9673806 chr2L 9674012 9674034 7 228 0.0 9.0 4.5 1.3 250 chr2L 9673784 intergenic not near genes chr2L 9673909 intergenic not near genes chr2L 9674034 intergenic not near genes chr2L_7_9670001 chr2L_9670001 CanS-SH 261 chr2L 9719739 9719778 chr2L 9719897 9719941 8 159 6.0 9.5 7.8 0.9 202 chr2L 9719739 intron Nckx30C - chr2L 9719840 intron Nckx30C - chr2L 9719941 intron Nckx30C - chr2L_8_9715001 chr2L_9715001 CanS-SH 262 chr2L 9730903 9730998 chr2L 9731061 9731156 20 158 3.0 6.5 4.8 3.4 253 chr2L 9730903 intron,3` UTR Nckx30C -,CG13116 + chr2L 9731030 intron Nckx30C - chr2L 9731156 intron Nckx30C - chr2L_20_9730001 chr2L_9730001 CanS-SH 263 chr2L 9748771 9748814 chr2L 9748963 9749006 13 192 16.5 12.5 14.5 0.8 235 chr2L 9748771 exon Cyp4e3 - chr2L 9748888 exon Cyp4e3 - chr2L 9749006 exon Cyp4e3 - chr2L_13_9745001 chr2L_9745001 CanS-SH 264 chr2L 9862339 9862345 chr2L 9862522 9862528 5 183 0.0 15.5 7.8 0.6 189 chr2L 9862339 intron nAChRalpha6 - chr2L 9862434 intron nAChRalpha6 - chr2L 9862528 intron nAChRalpha6 - chr2L_5_9860001 chr2L_9860001 CanS-SH 265 chr2L 9973671 9973705 chr2L 9980865 9980899 HMS-Beagle 9 7194 9.0 11.0 10.0 0.8 7228 chr2L 9973671 intergenic not near genes chr2L 9977285 intergenic not near genes chr2L 9980899 intergenic not near genes chr2L_9_9975001 chr2L_9975001 CanS-SH 266 chr2L 10045342 10045419 chr2L 10045497 10045574 24 155 7.5 9.5 8.5 2.5 232 chr2L 10045342 intergenic not near genes chr2L 10045458 intergenic not near genes chr2L 10045574 intergenic not near genes chr2L_24_10045001 chr2L_10045001 CanS-SH 267 chr2L 10045820 10045917 chr2L 10046032 10046128 17 211 6.5 0.5 3.5 3.8 308 chr2L 10045820 intergenic not near genes chr2L 10045974 intergenic not near genes chr2L 10046128 intergenic not near genes chr2L_17_10045001 chr2L_10045001 CanS-SH 268 chr2L 10051666 10051732 chr2L 10051826 10051892 14 160 7.5 10.0 8.8 1.4 226 chr2L 10051666 5` UTR CR44874 + chr2L 10051779 5` UTR CR44874 + chr2L 10051892 5` UTR CR44874 + chr2L_14_10050001 chr2L_10050001 CanS-SH 269 chr2L 10110097 10110172 chr2L 10110251 10110325 26 154 6.5 8.0 7.2 3.2 228 chr2L 10110097 intron,intron CG44153 -,CG34109 + chr2L 10110211 intron,intron CG44153 -,CG34109 + chr2L 10110325 intron,intron CG44153 -,CG34109 + chr2L_26_10110001 chr2L_10110001 CanS-SH 270 chr2L 10156258 10156297 chr2L 10163803 10163842 blood 10 7545 15.0 7.5 11.2 0.8 7584 chr2L 10156258 intron,3` UTR CG44153 -,CG4839 + chr2L 10160050 intron CG44153 - chr2L 10163842 intron CG44153 - chr2L_10_10160001 chr2L_10160001 CanS-SH 271 chr2L 10177337 10177394 chr2L 10177492 10177549 7 155 3.5 7.0 5.2 1.1 212 chr2L 10177337 intron CG44153 - chr2L 10177443 intron CG44153 - chr2L 10177549 intron CG44153 - chr2L_7_10175001 chr2L_10175001 CanS-SH 272 chr2L 10209790 10209796 chr2L 10209942 10209948 6 152 15.5 8.5 12.0 0.5 158 chr2L 10209790 intergenic CR44845 +,CG5731 -,CG5727 - chr2L 10209869 3` UTR CG5727 - chr2L 10209948 3` UTR CG5727 - chr2L_6_10205001 chr2L_10205001 CanS-SH 273 chr2L 10258421 10258438 chr2L 10258581 10258598 9 160 0.0 21.5 10.8 0.8 177 chr2L 10258421 intron Pten - chr2L 10258510 intron Pten - chr2L 10258598 exon Pten - chr2L_9_10255001 chr2L_10255001 CanS-SH 274 chr2L 10348311 10348344 chr2L 10348469 10348502 11 158 15.0 0.0 7.5 1.3 191 chr2L 10348311 intron CG34367 - chr2L 10348406 intron CG34367 - chr2L 10348502 intron CG34367 - chr2L_11_10345001 chr2L_10345001 CanS-SH 275 chr2L 10421251 10421258 chr2L 10421415 10421422 5 164 18.0 18.5 18.2 0.3 171 chr2L 10421251 exon pie - chr2L 10421336 exon pie - chr2L 10421422 exon pie - chr2L_5_10420001 chr2L_10420001 CanS-SH 276 chr2L 10442217 10442231 chr2L 10442369 10442383 5 152 9.0 0.0 4.5 0.9 166 chr2L 10442217 intergenic CR45375 -,loh + chr2L 10442300 intergenic CR45375 -,loh + chr2L 10442383 intergenic loh +,CR45375 - chr2L_5_10440001 chr2L_10440001 CanS-SH 277 chr2L 10515296 10515360 chr2L 10515464 10515528 26 168 7.5 12.5 10.0 2.4 232 chr2L 10515296 intron,intron CG45083 -,Fatp - chr2L 10515412 intron,intron CG45083 -,Fatp - chr2L 10515528 intron,intron CG45083 -,Fatp - chr2L_26_10515001 chr2L_10515001 CanS-SH 278 chr2L 10560107 10560142 chr2L 10560459 10560494 14 352 7.5 6.5 7.0 1.8 387 chr2L 10560107 intron Trim9 + chr2L 10560300 intron Trim9 + chr2L 10560494 intron Trim9 + chr2L_14_10560001 chr2L_10560001 CanS-SH 279 chr2L 10563845 10563936 chr2L 10564013 10564104 25 168 2.0 10.5 6.2 3.5 259 chr2L 10563845 intron Trim9 + chr2L 10563974 intron Trim9 + chr2L 10564104 intron Trim9 + chr2L_25_10560001 chr2L_10560001 CanS-SH 280 chr2L 10578394 10578429 chr2L 10578775 10578810 12 381 13.0 9.5 11.2 1.0 416 chr2L 10578394 intron Trim9 + chr2L 10578602 intron Trim9 + chr2L 10578810 intron Trim9 + chr2L_12_10575001 chr2L_10575001 CanS-SH 281 chr2L 10580733 10580808 chr2L 10580889 10580964 26 156 6.0 11.5 8.8 2.7 231 chr2L 10580733 intron Trim9 + chr2L 10580848 intron Trim9 + chr2L 10580964 intron,3` UTR Trim9 +,CG34161 - chr2L_26_10580001 chr2L_10580001 CanS-SH 282 chr2L 10592777 10592866 chr2L 10600513 10600603 opus 9 7736 2.5 5.0 3.8 1.9 7826 chr2L 10592777 intron Trim9 + chr2L 10596690 intron Trim9 + chr2L 10600603 intron Trim9 + chr2L_9_10595001 chr2L_10595001 CanS-SH 283 chr2L 10604151 10604190 chr2L 10604328 10604367 13 177 6.5 7.0 6.8 1.7 216 chr2L 10604151 intron Trim9 + chr2L 10604259 intron Trim9 + chr2L 10604367 intron Trim9 + chr2L_13_10600001 chr2L_10600001 CanS-SH 284 chr2L 10656516 10656610 chr2L 10656667 10656761 23 151 10.5 5.5 8.0 2.6 245 chr2L 10656516 intergenic not near genes chr2L 10656638 intergenic not near genes chr2L 10656761 intergenic not near genes chr2L_23_10655001 chr2L_10655001 CanS-SH 285 chr2L 10688471 10688523 chr2L 10688622 10688674 18 151 2.0 5.5 3.8 3.8 203 chr2L 10688471 intergenic CG7294 - chr2L 10688572 intergenic CG7294 - chr2L 10688674 intergenic CG7294 - chr2L_18_10685001 chr2L_10685001 CanS-SH 286 chr2L 10723463 10723553 chr2L 10723632 10723722 15 169 3.0 3.0 3.0 3.8 259 chr2L 10723463 intergenic not near genes chr2L 10723592 intergenic not near genes chr2L 10723722 intergenic CG6431 + chr2L_15_10720001 chr2L_10720001 CanS-SH 287 chr2L 10789030 10789100 chr2L 10789202 10789272 24 172 7.5 13.0 10.2 2.1 242 chr2L 10789030 intron CG31869 - chr2L 10789151 intron CG31869 - chr2L 10789272 intron CG31869 - chr2L_24_10785001 chr2L_10785001 CanS-SH 288 chr2L 10836711 10836777 chr2L 10836864 10836930 16 153 6.5 8.5 7.5 1.9 219 chr2L 10836711 intron Nos - chr2L 10836820 intron Nos - chr2L 10836930 intron Nos - chr2L_16_10835001 chr2L_10835001 CanS-SH 289 chr2L 10862784 10862808 chr2L 10864474 10864498 Rt1c 7 1690 16.0 7.5 11.8 0.5 1714 chr2L 10862784 intron CR43807 - chr2L 10863641 intron CR43807 - chr2L 10864498 3` UTR CR43807 - chr2L_7_10860001 chr2L_10860001 CanS-SH 290 chr2L 10876497 10876530 chr2L 10883632 10883665 297 7 7135 14.0 3.0 8.5 0.7 7168 chr2L 10876497 intergenic not near genes chr2L 10880081 intergenic not near genes chr2L 10883665 intergenic not near genes chr2L_7_10880001 chr2L_10880001 CanS-SH 291 chr2L 10895692 10895769 chr2L 10895853 10895930 24 161 9.0 5.5 7.2 2.9 238 chr2L 10895692 intergenic CR44491 - chr2L 10895811 intergenic CR44491 - chr2L 10895930 intergenic not near genes chr2L_24_10895001 chr2L_10895001 CanS-SH 292 chr2L 10945018 10945089 chr2L 10945169 10945240 12 151 10.5 11.5 11.0 1.0 222 chr2L 10945018 intron dpr2 - chr2L 10945129 intron dpr2 - chr2L 10945240 intron dpr2 - chr2L_12_10945001 chr2L_10945001 CanS-SH 293 chr2L 10946892 10946916 chr2L 10956182 10956206 roo 7 9290 15.0 15.5 15.2 0.4 9314 chr2L 10946892 intron dpr2 - chr2L 10951549 intron dpr2 - chr2L 10956206 intron dpr2 - chr2L_7_10950001 chr2L_10950001 CanS-SH 294 chr2L 11056504 11056577 chr2L 11056661 11056734 30 157 7.5 8.0 7.8 3.4 230 chr2L 11056504 intron Samuel - chr2L 11056619 intron Samuel - chr2L 11056734 intron Samuel - chr2L_30_11055001 chr2L_11055001 CanS-SH 295 chr2L 11174581 11174656 chr2L 11174736 11174808 23 154 8.0 9.5 8.8 2.3 227 chr2L 11174581 intron Ca-beta - chr2L 11174694 intron Ca-beta - chr2L 11174808 intron Ca-beta - chr2L_23_11170001 chr2L_11170001 CanS-SH 296 chr2L 11193502 11193535 chr2L 11193660 11193693 13 158 5.5 6.0 5.8 1.9 191 chr2L 11193502 intron Ca-beta - chr2L 11193598 intron Ca-beta - chr2L 11193693 intron Ca-beta - chr2L_13_11190001 chr2L_11190001 CanS-SH 297 chr2L 11206382 11206436 chr2L 11206567 11206621 15 185 18.5 10.5 14.5 1.0 239 chr2L 11206382 intergenic CR43859 - chr2L 11206502 intergenic CR43859 - chr2L 11206621 intergenic not near genes chr2L_15_11205001 chr2L_11205001 CanS-SH 298 chr2L 11215085 11215101 chr2L 11218750 11218766 Doc 6 3665 11.0 6.5 8.8 0.6 3681 chr2L 11215085 intron ab + chr2L 11216926 intron ab + chr2L 11218766 intron ab + chr2L_6_11215001 chr2L_11215001 CanS-SH 299 chr2L 11223994 11224037 chr2L 11224180 11224223 13 186 19.0 7.0 13.0 0.9 229 chr2L 11223994 intron ab + chr2L 11224108 intron ab + chr2L 11224223 intron ab + chr2L_13_11220001 chr2L_11220001 CanS-SH 300 chr2L 11292316 11292376 chr2L 11292472 11292532 21 156 10.5 7.5 9.0 2.1 216 chr2L 11292316 intergenic not near genes chr2L 11292424 intergenic not near genes chr2L 11292532 intergenic not near genes chr2L_21_11290001 chr2L_11290001 CanS-SH 301 chr2L 11315195 11315271 chr2L 11317674 11317750 G2 20 2479 9.0 9.0 9.0 2.0 2555 chr2L 11315195 intergenic not near genes chr2L 11316472 intergenic not near genes chr2L 11317750 intergenic not near genes chr2L_20_11315001 chr2L_11315001 CanS-SH 302 chr2L 11363057 11363115 chr2L 11363219 11363278 9 162 5.0 8.0 6.5 1.2 221 chr2L 11363057 intron salr + chr2L 11363168 intron salr + chr2L 11363278 intron salr + chr2L_9_11360001 chr2L_11360001 CanS-SH 303 chr2L 12067271 12067308 chr2L 12074398 12074435 297 17 7127 17.5 8.0 12.8 1.2 7164 chr2L 12067271 intergenic CG14946 - chr2L 12070853 intergenic not near genes chr2L 12074435 intergenic not near genes chr2L_17_12070001 chr2L_12070001 CanS-SH 304 chr2L 12123176 12123256 chr2L 12123336 12123416 4 160 8.5 6.0 7.2 0.5 240 chr2L 12123176 intron CG17211 + chr2L 12123296 intron CG17211 + chr2L 12123416 intron CG17211 + chr2L_4_12120001 chr2L_12120001 CanS-SH 305 chr2L 12132645 12132724 chr2L 12132808 12132885 11 162 12.0 4.0 8.0 1.2 240 chr2L 12132645 intron rho-6 - chr2L 12132765 intron rho-6 - chr2L 12132885 intron rho-6 - chr2L_11_12130001 chr2L_12130001 CanS-SH 306 chr2L 12153955 12153993 chr2L 12154505 12154543 14 550 13.5 10.5 12.0 1.1 588 chr2L 12153955 exon CG31760 + chr2L 12154249 intron CG31760 + chr2L 12154543 intron CG31760 + chr2L_14_12150001 chr2L_12150001 CanS-SH 307 chr2L 12192284 12192368 chr2L 12192484 12192568 18 200 6.5 6.0 6.2 2.5 284 chr2L 12192284 intron aret + chr2L 12192426 intron aret + chr2L 12192568 intron aret + chr2L_18_12190001 chr2L_12190001 CanS-SH 308 chr2L 12209971 12210041 chr2L 12210135 12210205 13 164 9.0 8.0 8.5 1.4 234 chr2L 12209971 intron,3` UTR aret +,CG31759 + chr2L 12210088 intron aret + chr2L 12210205 intron aret + chr2L_13_12210001 chr2L_12210001 CanS-SH 309 chr2L 12233975 12234041 chr2L 12234145 12234211 16 170 9.5 6.0 7.8 1.8 236 chr2L 12233975 intron aret + chr2L 12234093 intron aret + chr2L 12234211 intron aret + chr2L_16_12230001 chr2L_12230001 CanS-SH 310 chr2L 12275123 12275163 chr2L 12275285 12275325 7 162 9.5 8.5 9.0 0.7 202 chr2L 12275123 intron aret + chr2L 12275224 intron aret + chr2L 12275325 intron aret + chr2L_7_12275001 chr2L_12275001 CanS-SH 311 chr2L 12315594 12315683 chr2L 12316134 12316222 10 540 9.0 4.5 6.8 1.3 628 chr2L 12315594 intergenic CR45282 - chr2L 12315908 3` UTR CR45282 - chr2L 12316222 intergenic CR45283 -,CR45282 - chr2L_10_12315001 chr2L_12315001 CanS-SH 312 chr2L 12360958 12361041 chr2L 12361185 12361270 13 228 7.0 4.0 5.5 2.0 312 chr2L 12360958 intron bru-2 + chr2L 12361114 intron bru-2 + chr2L 12361270 intron bru-2 + chr2L_13_12360001 chr2L_12360001 CanS-SH 313 chr2L 12418349 12418437 chr2L 12418507 12418595 21 158 1.0 9.0 5.0 3.5 246 chr2L 12418349 intron vir-1 - chr2L 12418472 intron vir-1 - chr2L 12418595 intron vir-1 - chr2L_21_12415001 chr2L_12415001 CanS-SH 314 chr2L 12424348 12424367 chr2L 12424499 12424518 9 151 8.5 16.0 12.2 0.7 170 chr2L 12424348 intergenic not near genes chr2L 12424433 intergenic CG6405 + chr2L 12424518 intergenic CG6405 + chr2L_9_12420001 chr2L_12420001 CanS-SH 315 chr2L 12426064 12426152 chr2L 12426222 12426310 23 158 9.5 12.0 10.8 1.9 246 chr2L 12426064 exon CG6405 + chr2L 12426187 exon CG6405 + chr2L 12426310 exon CG6405 + chr2L_23_12425001 chr2L_12425001 CanS-SH 316 chr2L 12471083 12471132 chr2L 12471234 12471283 10 151 7.5 16.0 11.8 0.8 200 chr2L 12471083 intron bun - chr2L 12471183 intron bun - chr2L 12471283 intron bun - chr2L_10_12470001 chr2L_12470001 CanS-SH 317 chr2L 12498985 12499011 chr2L 12499137 12499163 10 152 0.0 5.5 2.8 2.6 178 chr2L 12498985 intron bun - chr2L 12499074 intron bun - chr2L 12499163 intron bun - chr2L_10_12495001 chr2L_12495001 CanS-SH 318 chr2L 12529165 12529205 chr2L 12529392 12529432 17 227 17.0 8.0 12.5 1.3 267 chr2L 12529165 intron bun - chr2L 12529298 intron bun - chr2L 12529432 intron bun - chr2L_17_12525001 chr2L_12525001 CanS-SH 319 chr2L 12558264 12558296 chr2L 12565468 12565500 HMS-Beagle 9 7204 18.5 9.5 14.0 0.6 7236 chr2L 12558264 intergenic not near genes chr2L 12561882 intergenic not near genes chr2L 12565500 intergenic not near genes chr2L_9_12560001 chr2L_12560001 CanS-SH 320 chr2L 12570284 12570339 chr2L 12570440 12570503 9 163 12.5 0.0 6.2 1.2 219 chr2L 12570284 intergenic CR44598 - chr2L 12570394 intergenic CR44598 - chr2L 12570503 intergenic CR44598 - chr2L_9_12570001 chr2L_12570001 CanS-SH 321 chr2L 12653728 12653805 chr2L 12653920 12653997 9 192 7.5 8.5 8.0 1.0 269 chr2L 12653728 intergenic not near genes chr2L 12653862 intergenic not near genes chr2L 12653997 intergenic not near genes chr2L_9_12650001 chr2L_12650001 CanS-SH 322 chr2L 12717343 12717359 chr2L 12717507 12717523 9 164 12.5 8.5 10.5 0.8 180 chr2L 12717343 intron Pih1D1 - chr2L 12717433 intron Pih1D1 - chr2L 12717523 intron Pih1D1 - chr2L_9_12715001 chr2L_12715001 CanS-SH 323 chr2L 12730997 12731031 chr2L 12735839 12735873 F-element 10 4842 18.5 6.5 12.5 0.7 4876 chr2L 12730997 intron MRP + chr2L 12733435 intron MRP + chr2L 12735873 intron MRP + chr2L_10_12730001 chr2L_12730001 CanS-SH 324 chr2L 12739112 12739144 chr2L 12743968 12744000 Doc 16 4856 19.5 8.0 13.8 1.1 4888 chr2L 12739112 exon MRP + chr2L 12741556 intron MRP + chr2L 12744000 exon MRP + chr2L_16_12740001 chr2L_12740001 CanS-SH 325 chr2L 12751245 12751333 chr2L 12751403 12751491 27 158 7.0 9.5 8.2 2.9 246 chr2L 12751245 intergenic not near genes chr2L 12751368 intergenic not near genes chr2L 12751491 intergenic not near genes chr2L_27_12750001 chr2L_12750001 CanS-SH 326 chr2L 12781751 12781774 chr2L 12789269 12789292 Quasimodo 7 7518 15.0 5.0 10.0 0.6 7541 chr2L 12781751 intergenic not near genes chr2L 12785522 intergenic not near genes chr2L 12789292 intergenic not near genes chr2L_7_12785001 chr2L_12785001 CanS-SH 327 chr2L 12809532 12809606 chr2L 12810221 12810293 9 688 0.5 11.5 6.0 1.3 761 chr2L 12809532 intergenic not near genes chr2L 12809912 intergenic not near genes chr2L 12810293 intergenic not near genes chr2L_9_12805001 chr2L_12805001 CanS-SH 328 chr2L 12835489 12835581 chr2L 12835673 12835765 12 184 6.0 7.5 6.8 1.5 276 chr2L 12835489 intergenic not near genes chr2L 12835627 intergenic not near genes chr2L 12835765 intergenic not near genes chr2L_12_12835001 chr2L_12835001 CanS-SH 329 chr2L 12861638 12861664 chr2L 12863180 12863206 hobo 8 1542 16.0 7.5 11.8 0.6 1568 chr2L 12861638 intergenic not near genes chr2L 12862422 intergenic not near genes chr2L 12863206 intergenic not near genes chr2L_8_12860001 chr2L_12860001 CanS-SH 330 chr2L 12893973 12893994 chr2L 12895515 12895536 hobo 4 1542 21.0 11.0 16.0 0.2 1563 chr2L 12893973 intergenic not near genes chr2L 12894754 intergenic not near genes chr2L 12895536 intergenic not near genes chr2L_4_12890001 chr2L_12890001 CanS-SH 331 chr2L 12933793 12933823 chr2L 12941335 12941364 blood 6 7542 12.5 7.0 9.8 0.6 7571 chr2L 12933793 intergenic not near genes chr2L 12937578 intergenic not near genes chr2L 12941364 intergenic not near genes chr2L_6_12935001 chr2L_12935001 CanS-SH 332 chr2L 12944909 12944965 chr2L 12945132 12945188 13 223 6.0 8.5 7.2 1.6 279 chr2L 12944909 intergenic not near genes chr2L 12945048 intergenic not near genes chr2L 12945188 intergenic not near genes chr2L_13_12945001 chr2L_12945001 CanS-SH 333 chr2L 12946698 12946793 chr2L 12946877 12946960 9 175 0.0 0.0 0.0 9.0 262 chr2L 12946698 intergenic not near genes chr2L 12946829 intergenic not near genes chr2L 12946960 intergenic not near genes chr2L_9_12945001 chr2L_12945001 CanS-SH 334 chr2L 13147674 13147723 chr2L 13147825 13147874 9 151 7.5 8.5 8.0 1.0 200 chr2L 13147674 intergenic not near genes chr2L 13147774 intergenic not near genes chr2L 13147874 intergenic not near genes chr2L_9_13145001 chr2L_13145001 CanS-SH 335 chr2L 13152211 13152252 chr2L 13152368 13152409 14 157 8.5 13.5 11.0 1.2 198 chr2L 13152211 intergenic not near genes chr2L 13152310 intergenic not near genes chr2L 13152409 intergenic not near genes chr2L_14_13150001 chr2L_13150001 CanS-SH 336 chr2L 13156388 13156469 chr2L 13156572 13156654 15 184 10.0 6.5 8.2 1.6 266 chr2L 13156388 intergenic not near genes chr2L 13156521 intergenic not near genes chr2L 13156654 intergenic not near genes chr2L_15_13155001 chr2L_13155001 CanS-SH 337 chr2L 13255210 13255296 chr2L 13255428 13255514 8 218 0.0 4.5 2.2 2.5 304 chr2L 13255210 intron CG31728 + chr2L 13255362 intron CG31728 + chr2L 13255514 exon CG31728 + chr2L_8_13255001 chr2L_13255001 CanS-SH 338 chr2L 13266346 13266403 chr2L 13266509 13266566 18 163 4.5 19.5 12.0 1.4 220 chr2L 13266346 intron CG44085 + chr2L 13266456 intron CG44085 + chr2L 13266566 intron CG44085 + chr2L_18_13265001 chr2L_13265001 CanS-SH 339 chr2L 13341705 13341752 chr2L 13342393 13342440 18 688 10.5 7.0 8.8 1.8 735 chr2L 13341705 intergenic not near genes chr2L 13342072 intergenic not near genes chr2L 13342440 intergenic not near genes chr2L_18_13340001 chr2L_13340001 CanS-SH 340 chr2L 13351754 13351835 chr2L 13351915 13351996 27 161 9.0 8.0 8.5 2.8 242 chr2L 13351754 exon CG9395 - chr2L 13351875 intron CG9395 - chr2L 13351996 exon CG9395 - chr2L_27_13350001 chr2L_13350001 CanS-SH 341 chr2L 13405591 13405626 chr2L 13410463 13410498 Doc 24 4872 19.5 17.0 18.2 1.2 4907 chr2L 13405591 exon CG7110 + chr2L 13408044 intron CG7110 + chr2L 13410498 intron CG7110 + chr2L_24_13405001 chr2L_13405001 CanS-SH 342 chr2L 13449402 13449437 chr2L 13456913 13456948 Quasimodo 9 7511 14.0 8.0 11.0 0.8 7546 chr2L 13449402 intron,intron CG42784 +,Hsp60D - chr2L 13453175 intron CG42784 + chr2L 13456948 intron CG42784 + chr2L_9_13450001 chr2L_13450001 CanS-SH 343 chr2L 13481391 13481422 chr2L 13482073 13482104 jockey 15 682 18.0 10.0 14.0 1.0 713 chr2L 13481391 intron CG42784 + chr2L 13481748 intron CG42784 + chr2L 13482104 intron CG42784 + chr2L_15_13480001 chr2L_13480001 CanS-SH 344 chr2L 13560340 13560377 chr2L 13565236 13565272 F-element 13 4896 22.5 13.0 17.8 0.7 4932 chr2L 13560340 intron kuz + chr2L 13562806 intron kuz + chr2L 13565272 intron kuz + chr2L_13_13560001 chr2L_13560001 CanS-SH 345 chr2L 13684194 13684289 chr2L 13684345 13684440 23 151 5.5 7.0 6.2 3.2 246 chr2L 13684194 intron CG31814 - chr2L 13684317 intron CG31814 - chr2L 13684440 exon CG31814 - chr2L_23_13680001 chr2L_13680001 CanS-SH 346 chr2L 13713498 13713548 chr2L 13713649 13713699 21 151 10.5 12.0 11.2 1.7 201 chr2L 13713498 intron CG31814 - chr2L 13713598 intron CG31814 - chr2L 13713699 intron CG31814 - chr2L_21_13710001 chr2L_13710001 CanS-SH 347 chr2L 13761748 13761772 chr2L 13762934 13762958 Doc 8 1186 16.5 7.5 12.0 0.6 1210 chr2L 13761748 intron TM9SF4 + chr2L 13762353 intron TM9SF4 + chr2L 13762958 intron TM9SF4 + chr2L_8_13760001 chr2L_13760001 CanS-SH 348 chr2L 13853028 13853057 chr2L 13862253 13862282 roo 13 9225 15.0 10.0 12.5 1.0 9254 chr2L 13853028 intron CenG1A + chr2L 13857655 intron CenG1A + chr2L 13862282 intron CenG1A + chr2L_13_13855001 chr2L_13855001 CanS-SH 349 chr2L 13970829 13970893 chr2L 13970986 13971050 21 157 9.5 9.5 9.5 2.0 221 chr2L 13970829 exon NimB5 + chr2L 13970940 intron NimB5 + chr2L 13971050 intron NimB5 + chr2L_21_13970001 chr2L_13970001 CanS-SH 350 chr2L 14014330 14014407 chr2L 14014490 14014567 17 160 7.0 14.0 10.5 1.5 237 chr2L 14014330 intron bgm + chr2L 14014448 intron bgm + chr2L 14014567 intron bgm + chr2L_17_14010001 chr2L_14010001 CanS-SH 351 chr2L 14021274 14021305 chr2L 14021450 14021481 17 176 10.0 5.0 7.5 2.0 207 chr2L 14021274 intergenic CR45352 - chr2L 14021378 intergenic CR45352 - chr2L 14021481 intergenic CR45352 - chr2L_17_14020001 chr2L_14020001 CanS-SH 352 chr2L 14121253 14121285 chr2L 14121411 14121443 8 158 5.5 8.5 7.0 1.0 190 chr2L 14121253 intergenic not near genes chr2L 14121348 intergenic not near genes chr2L 14121443 intergenic not near genes chr2L_8_14120001 chr2L_14120001 CanS-SH 353 chr2L 14222233 14222313 chr2L 14222395 14222475 20 162 11.0 5.0 8.0 2.2 242 chr2L 14222233 intron Dyrk2 - chr2L 14222354 intron Dyrk2 - chr2L 14222475 intron Dyrk2 - chr2L_20_14220001 chr2L_14220001 CanS-SH 354 chr2L 14229580 14229643 chr2L 14229740 14229811 15 164 0.0 8.0 4.0 3.0 231 chr2L 14229580 intron Dyrk2 - chr2L 14229696 intron Dyrk2 - chr2L 14229811 intron Dyrk2 - chr2L_15_14225001 chr2L_14225001 CanS-SH 355 chr2L 14265369 14265402 chr2L 14265702 14265735 4 333 20.5 0.0 10.2 0.4 366 chr2L 14265369 intron wb + chr2L 14265552 intron wb + chr2L 14265735 intron wb + chr2L_4_14265001 chr2L_14265001 CanS-SH 356 chr2L 14268520 14268600 chr2L 14268672 14268752 23 152 7.0 10.0 8.5 2.4 232 chr2L 14268520 intron wb + chr2L 14268636 intron wb + chr2L 14268752 intron wb + chr2L_23_14265001 chr2L_14265001 CanS-SH 357 chr2L 14333836 14333927 chr2L 14334010 14334102 15 174 8.0 2.0 5.0 2.5 266 chr2L 14333836 3` UTR ms(2)34Fe + chr2L 14333969 intergenic ms(2)34Fe +,CG33090 + chr2L 14334102 intergenic CG33090 +,ms(2)34Fe + chr2L_15_14330001 chr2L_14330001 CanS-SH 358 chr2L 14336526 14336560 chr2L 14336777 14336811 15 251 5.0 9.0 7.0 1.9 285 chr2L 14336526 intron CG33090 + chr2L 14336668 intron CG33090 + chr2L 14336811 intron CG33090 + chr2L_15_14335001 chr2L_14335001 CanS-SH 359 chr2L 14345448 14345482 chr2L 14345678 14345712 15 230 55.5 47.0 51.2 0.3 264 chr2L 14345448 3` UTR CG33090 + chr2L 14345580 3` UTR CG33090 + chr2L 14345712 3` UTR CG33090 + chr2L_15_14345001 chr2L_14345001 CanS-SH 360 chr2L 14374705 14374799 chr2L 14374871 14374965 17 166 5.5 7.5 6.5 2.3 260 chr2L 14374705 intergenic not near genes chr2L 14374835 intergenic not near genes chr2L 14374965 intergenic not near genes chr2L_17_14370001 chr2L_14370001 CanS-SH 361 chr2L 14380309 14380334 chr2L 14380523 14380548 7 214 3.5 8.0 5.8 1.0 239 chr2L 14380309 exon ppk - chr2L 14380428 intron ppk - chr2L 14380548 exon ppk - chr2L_7_14380001 chr2L_14380001 CanS-SH 362 chr2L 14409973 14410056 chr2L 14410143 14410226 21 170 6.0 9.5 7.8 2.4 253 chr2L 14409973 5` UTR CR44733 + chr2L 14410100 intergenic CR44733 + chr2L 14410226 intergenic CR44733 + chr2L_21_14410001 chr2L_14410001 CanS-SH 363 chr2L 14429360 14429447 chr2L 14429516 14429603 23 156 8.5 10.0 9.2 2.3 243 chr2L 14429360 3` UTR CR44732 - chr2L 14429482 3` UTR CR44732 - chr2L 14429603 3` UTR CR44732 - chr2L_23_14425001 chr2L_14425001 CanS-SH 364 chr2L 14462659 14462816 chr2L 14462821 14462987 4 166 0.0 0.0 0.0 4.0 328 chr2L 14462659 intergenic not near genes chr2L 14462823 intergenic not near genes chr2L 14462987 intergenic not near genes chr2L_4_14460001 chr2L_14460001 CanS-SH 365 chr2L 14502256 14502358 chr2L 14502437 14502521 21 171 0.0 8.0 4.0 4.2 265 chr2L 14502256 intergenic not near genes chr2L 14502388 intergenic not near genes chr2L 14502521 intergenic not near genes chr2L_21_14500001 chr2L_14500001 CanS-SH 366 chr2L 14503360 14503415 chr2L 14503514 14503569 21 154 8.5 6.0 7.2 2.6 209 chr2L 14503360 intergenic not near genes chr2L 14503464 intergenic not near genes chr2L 14503569 intergenic not near genes chr2L_21_14500001 chr2L_14500001 CanS-SH 367 chr2L 14510396 14510440 chr2L 14510573 14510617 11 177 13.0 5.5 9.2 1.1 221 chr2L 14510396 3` UTR CR45693 - chr2L 14510506 3` UTR CR45693 - chr2L 14510617 3` UTR CR45693 - chr2L_11_14510001 chr2L_14510001 CanS-SH 368 chr2L 14524555 14524591 chr2L 14525127 14525164 10 573 11.0 9.5 10.2 0.9 609 chr2L 14524555 exon CG33648 + chr2L 14524860 intron CG33648 + chr2L 14525164 exon CG33648 + chr2L_10_14520001 chr2L_14520001 CanS-SH 369 chr2L 14570658 14570718 chr2L 14570814 14570874 5 156 3.0 7.0 5.0 0.8 216 chr2L 14570658 intergenic not near genes chr2L 14570766 intergenic not near genes chr2L 14570874 intergenic not near genes chr2L_5_14570001 chr2L_14570001 CanS-SH 370 chr2L 14618844 14618889 chr2L 14619300 14619345 jockey 8 456 8.0 5.5 6.8 1.0 501 chr2L 14618844 intron,3` UTR,3` UTR osp -,Adh +,Adhr + chr2L 14619094 intron osp - chr2L 14619345 intron osp - chr2L_8_14615001 chr2L_14615001 CanS-SH 371 chr2L 14624524 14624562 chr2L 14624678 14624716 9 154 4.0 15.0 9.5 0.9 192 chr2L 14624524 intron osp - chr2L 14624620 intron osp - chr2L 14624716 intron osp - chr2L_9_14620001 chr2L_14620001 CanS-SH 372 chr2L 14642511 14642543 chr2L 14651749 14651781 roo 11 9238 15.5 8.5 12.0 0.8 9270 chr2L 14642511 intron osp - chr2L 14647146 intron osp - chr2L 14651781 intron osp - chr2L_11_14645001 chr2L_14645001 CanS-SH 373 chr2L 14726509 14726564 chr2L 14726663 14726721 11 157 10.0 12.0 11.0 0.9 212 chr2L 14726509 exon CG42685 - chr2L 14726615 intron CG42685 - chr2L 14726721 exon CG42685 - chr2L_11_14725001 chr2L_14725001 CanS-SH 374 chr2L 14778746 14778765 chr2L 14779109 14779128 6 363 16.0 8.0 12.0 0.5 382 chr2L 14778746 intergenic not near genes chr2L 14778937 intergenic not near genes chr2L 14779128 intergenic not near genes chr2L_6_14775001 chr2L_14775001 CanS-SH 375 chr2L 14782425 14782464 chr2L 14782583 14782622 13 158 6.5 2.0 4.2 2.5 197 chr2L 14782425 intergenic not near genes chr2L 14782524 intergenic not near genes chr2L 14782622 intergenic not near genes chr2L_13_14780001 chr2L_14780001 CanS-SH 376 chr2L 14803825 14803855 chr2L 14809103 14809133 copia 10 5278 9.0 7.5 8.2 1.1 5308 chr2L 14803825 intergenic not near genes chr2L 14806479 intergenic not near genes chr2L 14809133 intergenic not near genes chr2L_10_14805001 chr2L_14805001 CanS-SH 377 chr2L 14835129 14835192 chr2L 14835294 14835357 11 165 8.0 1.5 4.8 1.9 228 chr2L 14835129 intergenic not near genes chr2L 14835243 intergenic not near genes chr2L 14835357 intergenic not near genes chr2L_11_14835001 chr2L_14835001 CanS-SH 378 chr2L 14840912 14841004 chr2L 14841075 14841166 10 163 6.5 7.0 6.8 1.3 254 chr2L 14840912 3` UTR CR43805 - chr2L 14841039 3` UTR CR43805 - chr2L 14841166 3` UTR CR43805 - chr2L_10_14840001 chr2L_14840001 CanS-SH 379 chr2L 14854537 14854627 chr2L 14854697 14854787 17 160 5.0 7.0 6.0 2.4 250 chr2L 14854537 intergenic not near genes chr2L 14854662 intergenic not near genes chr2L 14854787 intergenic not near genes chr2L_17_14850001 chr2L_14850001 CanS-SH 380 chr2L 14887617 14887701 chr2L 14887770 14887854 16 153 4.5 5.0 4.8 2.8 237 chr2L 14887617 intergenic not near genes chr2L 14887736 intergenic not near genes chr2L 14887854 intergenic not near genes chr2L_16_14885001 chr2L_14885001 CanS-SH 381 chr2L 14889890 14889925 chr2L 14890390 14890425 jockey 9 500 12.0 8.0 10.0 0.8 535 chr2L 14889890 intergenic not near genes chr2L 14890158 intergenic not near genes chr2L 14890425 intergenic not near genes chr2L_9_14890001 chr2L_14890001 CanS-SH 382 chr2L 14905664 14905754 chr2L 14905836 14905926 15 172 7.5 3.0 5.2 2.4 262 chr2L 14905664 intergenic not near genes chr2L 14905795 intergenic not near genes chr2L 14905926 intergenic not near genes chr2L_15_14905001 chr2L_14905001 CanS-SH 383 chr2L 14975208 14975262 chr2L 14975399 14975453 19 191 5.0 6.5 5.8 2.8 245 chr2L 14975208 intergenic CR45331 + chr2L 14975330 intergenic CR45331 +,mol - chr2L 14975453 intergenic mol -,CR45331 + chr2L_19_14975001 chr2L_14975001 CanS-SH 384 chr2L 14982234 14982275 chr2L 14982406 14982447 6 172 0.0 8.0 4.0 1.2 213 chr2L 14982234 intron mol - chr2L 14982340 intron mol - chr2L 14982447 intron mol - chr2L_6_14980001 chr2L_14980001 CanS-SH 385 chr2L 15003480 15003559 chr2L 15003639 15003718 25 159 10.5 2.0 6.2 3.5 238 chr2L 15003480 intergenic not near genes chr2L 15003599 intergenic not near genes chr2L 15003718 intergenic not near genes chr2L_25_15000001 chr2L_15000001 CanS-SH 386 chr2L 15013086 15013119 chr2L 15013265 15013298 13 179 16.5 6.5 11.5 1.0 212 chr2L 15013086 intergenic CR43856 - chr2L 15013192 intergenic not near genes chr2L 15013298 intergenic not near genes chr2L_13_15010001 chr2L_15010001 CanS-SH 387 chr2L 15025962 15025966 chr2L 15026118 15026122 4 156 24.0 8.0 16.0 0.2 160 chr2L 15025962 exon GABA-B-R1 + chr2L 15026042 exon GABA-B-R1 + chr2L 15026122 intron GABA-B-R1 + chr2L_4_15025001 chr2L_15025001 CanS-SH 388 chr2L 15044641 15044740 chr2L 15044792 15044895 25 153 7.0 1.0 4.0 5.0 254 chr2L 15044641 intergenic ck - chr2L 15044768 intergenic ck - chr2L 15044895 intergenic ck - chr2L_25_15040001 chr2L_15040001 CanS-SH 389 chr2L 15072272 15072284 chr2L 15072439 15072451 4 167 20.5 10.0 15.2 0.2 179 chr2L 15072272 intron vas + chr2L 15072362 exon vas + chr2L 15072451 exon vas + chr2L_4_15070001 chr2L_15070001 CanS-SH 390 chr2L 15078006 15078093 chr2L 15078169 15078256 27 163 7.0 11.0 9.0 2.7 250 chr2L 15078006 intron CG15270 + chr2L 15078131 intron CG15270 + chr2L 15078256 intron CG15270 + chr2L_27_15075001 chr2L_15075001 CanS-SH 391 chr2L 15079836 15079926 chr2L 15080002 15080093 20 167 8.5 6.5 7.5 2.4 257 chr2L 15079836 intron CG15270 + chr2L 15079964 intron CG15270 + chr2L 15080093 intron CG15270 + chr2L_20_15075001 chr2L_15075001 CanS-SH 392 chr2L 15082598 15082668 chr2L 15082767 15082837 23 169 16.0 10.0 13.0 1.6 239 chr2L 15082598 intron CG15270 + chr2L 15082718 intron CG15270 + chr2L 15082837 intron CG15270 + chr2L_23_15080001 chr2L_15080001 CanS-SH 393 chr2L 15093666 15093764 chr2L 15093828 15093916 18 156 6.5 5.0 5.8 2.6 250 chr2L 15093666 exon CG15270 + chr2L 15093791 intron CG15270 + chr2L 15093916 intron CG15270 + chr2L_18_15090001 chr2L_15090001 CanS-SH 394 chr2L 15098467 15098534 chr2L 15098622 15098689 31 155 0.5 0.0 0.2 25.8 222 chr2L 15098467 intergenic not near genes chr2L 15098578 intergenic not near genes chr2L 15098689 intergenic not near genes chr2L_31_15095001 chr2L_15095001 CanS-SH 395 chr2L 15122711 15122795 chr2L 15122866 15122950 36 155 6.5 7.5 7.0 4.5 239 chr2L 15122711 intergenic not near genes chr2L 15122830 intergenic not near genes chr2L 15122950 intergenic not near genes chr2L_36_15120001 chr2L_15120001 CanS-SH 396 chr2L 15128787 15128885 chr2L 15128942 15129058 10 157 5.0 0.5 2.8 2.6 271 chr2L 15128787 intergenic not near genes chr2L 15128922 intergenic not near genes chr2L 15129058 intergenic not near genes chr2L_10_15125001 chr2L_15125001 CanS-SH 397 chr2L 15161178 15161223 chr2L 15161389 15161434 12 211 15.0 6.0 10.5 1.0 256 chr2L 15161178 intergenic CR44770 + chr2L 15161306 intergenic CR44770 + chr2L 15161434 intergenic CR44770 +,CG4168 - chr2L_12_15160001 chr2L_15160001 CanS-SH 398 chr2L 15294041 15294072 chr2L 15294273 15294304 12 232 16.5 7.0 11.8 0.9 263 chr2L 15294041 3` UTR ms(2)35Ci + chr2L 15294172 intergenic ms(2)35Ci + chr2L 15294304 intergenic ms(2)35Ci + chr2L_12_15290001 chr2L_15290001 CanS-SH 399 chr2L 15345959 15346024 chr2L 15346115 15346182 23 156 6.0 9.0 7.5 2.7 223 chr2L 15345959 intergenic not near genes chr2L 15346070 intergenic not near genes chr2L 15346182 intergenic not near genes chr2L_23_15345001 chr2L_15345001 CanS-SH 400 chr2L 15375761 15375790 chr2L 15375948 15375977 7 187 10.0 8.0 9.0 0.7 216 chr2L 15375761 intergenic not near genes chr2L 15375869 intergenic not near genes chr2L 15375977 intergenic not near genes chr2L_7_15375001 chr2L_15375001 CanS-SH 401 chr2L 15403173 15403257 chr2L 15403326 15403411 11 154 7.5 1.5 4.5 2.0 238 chr2L 15403173 intergenic not near genes chr2L 15403292 intergenic not near genes chr2L 15403411 intergenic not near genes chr2L_11_15400001 chr2L_15400001 CanS-SH 402 chr2L 15445986 15446028 chr2L 15453530 15453572 blood 10 7544 10.5 0.0 5.2 1.6 7586 chr2L 15445986 intergenic not near genes chr2L 15449779 intergenic not near genes chr2L 15453572 intergenic not near genes chr2L_10_15445001 chr2L_15445001 CanS-SH 403 chr2L 15458202 15458275 chr2L 15458365 15458439 17 163 0.0 7.5 3.8 3.5 237 chr2L 15458202 intergenic not near genes chr2L 15458320 intergenic not near genes chr2L 15458439 intergenic not near genes chr2L_17_15455001 chr2L_15455001 CanS-SH 404 chr2L 15482547 15482602 chr2L 15482759 15482814 7 212 0.5 11.0 5.8 1.0 267 chr2L 15482547 intergenic not near genes chr2L 15482680 intergenic not near genes chr2L 15482814 intergenic not near genes chr2L_7_15480001 chr2L_15480001 CanS-SH 405 chr2L 15499994 15500054 chr2L 15500148 15500208 22 154 0.0 7.0 3.5 4.9 214 chr2L 15499994 intron lace + chr2L 15500101 intron lace + chr2L 15500208 intron lace + chr2L_22_15500001 chr2L_15500001 CanS-SH 406 chr2L 15510869 15510942 chr2L 15511038 15511111 18 169 9.5 8.0 8.8 1.8 242 chr2L 15510869 intergenic not near genes chr2L 15510990 intergenic not near genes chr2L 15511111 intergenic not near genes chr2L_18_15510001 chr2L_15510001 CanS-SH 407 chr2L 15514260 15514318 chr2L 15514419 15514477 20 159 14.5 14.0 14.2 1.3 217 chr2L 15514260 intergenic not near genes chr2L 15514368 intergenic not near genes chr2L 15514477 intergenic not near genes chr2L_20_15510001 chr2L_15510001 CanS-SH 408 chr2L 15586350 15586386 chr2L 15593477 15593513 297 13 7127 16.0 10.0 13.0 0.9 7163 chr2L 15586350 intergenic not near genes chr2L 15589932 intergenic not near genes chr2L 15593513 intergenic not near genes chr2L_13_15585001 chr2L_15585001 CanS-SH 409 chr2L 15636602 15636683 chr2L 15636753 15636834 17 151 7.5 5.5 6.5 2.3 232 chr2L 15636602 intergenic not near genes chr2L 15636718 intergenic not near genes chr2L 15636834 intergenic not near genes chr2L_17_15635001 chr2L_15635001 CanS-SH 410 chr2L 15641964 15641996 chr2L 15642402 15642434 12 438 23.0 8.5 15.8 0.7 470 chr2L 15641964 intergenic not near genes chr2L 15642199 intergenic not near genes chr2L 15642434 intergenic not near genes chr2L_12_15640001 chr2L_15640001 CanS-SH 411 chr2L 15776098 15776130 chr2L 15776499 15776530 10 400 10.0 7.5 8.8 1.0 432 chr2L 15776098 intergenic CG43760 - chr2L 15776314 intergenic CG43760 - chr2L 15776530 3` UTR CG43760 - chr2L_10_15775001 chr2L_15775001 CanS-SH 412 chr2L 15820980 15821004 chr2L 15821149 15821173 8 169 0.0 0.0 0.0 8.0 193 chr2L 15820980 intergenic not near genes chr2L 15821076 intergenic not near genes chr2L 15821173 intergenic not near genes chr2L_8_15820001 chr2L_15820001 CanS-SH 413 chr2L 15905241 15905309 chr2L 15905399 15905467 31 158 8.0 15.5 11.8 2.4 226 chr2L 15905241 3` UTR beat-Ib - chr2L 15905354 3` UTR beat-Ib - chr2L 15905467 3` UTR beat-Ib - chr2L_31_15905001 chr2L_15905001 CanS-SH 414 chr2L 15906109 15906191 chr2L 15906273 15906355 20 164 11.0 8.0 9.5 1.9 246 chr2L 15906109 intron beat-Ib - chr2L 15906232 intron beat-Ib - chr2L 15906355 exon beat-Ib - chr2L_20_15905001 chr2L_15905001 CanS-SH 415 chr2L 15955963 15956000 chr2L 15957505 15957542 hobo 15 1542 11.0 9.0 10.0 1.4 1579 chr2L 15955963 intron beat-Ib - chr2L 15956752 intron beat-Ib - chr2L 15957542 intron beat-Ib - chr2L_15_15955001 chr2L_15955001 CanS-SH 416 chr2L 16001393 16001466 chr2L 16001553 16001629 10 161 6.5 4.0 5.2 1.6 236 chr2L 16001393 intron beat-Ic + chr2L 16001511 intron beat-Ic + chr2L 16001629 intron beat-Ic + chr2L_10_16000001 chr2L_16000001 CanS-SH 417 chr2L 16005572 16005619 chr2L 16005756 16005803 22 184 0.0 7.0 3.5 4.9 231 chr2L 16005572 intron beat-Ic + chr2L 16005688 intron beat-Ic + chr2L 16005803 intron,3` UTR beat-Ic +,CG31820 - chr2L_22_16005001 chr2L_16005001 CanS-SH 418 chr2L 16007745 16007807 chr2L 16007906 16007968 21 161 12.5 7.5 10.0 1.9 223 chr2L 16007745 intron beat-Ic + chr2L 16007856 intron beat-Ic + chr2L 16007968 intron beat-Ic + chr2L_21_16005001 chr2L_16005001 CanS-SH 419 chr2L 16075282 16075352 chr2L 16075437 16075507 6 155 9.0 5.0 7.0 0.8 225 chr2L 16075282 exon beat-Ia + chr2L 16075394 intron beat-Ia + chr2L 16075507 intron beat-Ia + chr2L_6_16075001 chr2L_16075001 CanS-SH 420 chr2L 16139149 16139191 chr2L 16139340 16139382 14 191 11.5 4.0 7.8 1.6 233 chr2L 16139149 intergenic not near genes chr2L 16139266 intergenic not near genes chr2L 16139382 intergenic not near genes chr2L_14_16135001 chr2L_16135001 CanS-SH 421 chr2L 16141071 16141106 chr2L 16146367 16146402 copia 7 5296 9.0 6.5 7.8 0.8 5331 chr2L 16141071 intergenic not near genes chr2L 16143736 intergenic not near genes chr2L 16146402 intergenic not near genes chr2L_7_16140001 chr2L_16140001 CanS-SH 422 chr2L 16153668 16153756 chr2L 16160811 16160899 297 10 7143 6.0 3.0 4.5 1.8 7231 chr2L 16153668 intergenic not near genes chr2L 16157284 intergenic not near genes chr2L 16160899 intergenic not near genes chr2L_10_16155001 chr2L_16155001 CanS-SH 423 chr2L 16241565 16241647 chr2L 16241724 16241800 15 156 1.0 9.0 5.0 2.5 235 chr2L 16241565 intergenic CG42817 +,CG42818 + chr2L 16241682 intergenic CG42817 +,CG42818 + chr2L 16241800 intergenic CG42818 +,CG42817 + chr2L_15_16240001 chr2L_16240001 CanS-SH 424 chr2L 16241997 16242040 chr2L 16242164 16242207 20 167 15.5 0.0 7.8 2.3 210 chr2L 16241997 5` UTR CG42818 + chr2L 16242102 exon CG42818 + chr2L 16242207 exon CG42818 + chr2L_20_16240001 chr2L_16240001 CanS-SH 425 chr2L 16243620 16243852 chr2L 16243778 16244022 23 165 0.0 0.0 0.0 23.0 402 chr2L 16243620 exon CG42818 + chr2L 16243821 exon CG42818 + chr2L 16244022 exon CG42818 + chr2L_23_16240001 chr2L_16240001 CanS-SH 426 chr2L 16354702 16354786 chr2L 16354868 16354953 14 166 4.0 3.0 3.5 3.1 251 chr2L 16354702 intergenic CG4455 +,CaBP1 - chr2L 16354828 intergenic CaBP1 -,CG4455 + chr2L 16354953 3` UTR CaBP1 - chr2L_14_16350001 chr2L_16350001 CanS-SH 427 chr2L 16363908 16363929 chr2L 16364229 16364250 4 321 0.0 12.0 6.0 0.6 342 chr2L 16363908 intergenic not near genes chr2L 16364079 intergenic not near genes chr2L 16364250 intergenic not near genes chr2L_4_16360001 chr2L_16360001 CanS-SH 428 chr2L 16369057 16369104 chr2L 16369214 16369261 11 157 15.0 2.0 8.5 1.2 204 chr2L 16369057 intergenic not near genes chr2L 16369159 intergenic not near genes chr2L 16369261 intergenic not near genes chr2L_11_16365001 chr2L_16365001 CanS-SH 429 chr2L 16377850 16377867 chr2L 16378004 16378021 8 154 3.5 11.0 7.2 1.0 171 chr2L 16377850 intergenic not near genes chr2L 16377936 intergenic not near genes chr2L 16378021 intergenic not near genes chr2L_8_16375001 chr2L_16375001 CanS-SH 430 chr2L 16434046 16434128 chr2L 16434203 16434285 34 157 9.0 11.5 10.2 3.0 239 chr2L 16434046 intron CG5888 - chr2L 16434166 intron CG5888 - chr2L 16434285 intron CG5888 - chr2L_34_16430001 chr2L_16430001 CanS-SH 431 chr2L 16458753 16458854 chr2L 16459024 16459126 7 271 2.5 3.5 3.0 1.8 373 chr2L 16458753 intergenic not near genes chr2L 16458940 intergenic not near genes chr2L 16459126 intergenic not near genes chr2L_7_16455001 chr2L_16455001 CanS-SH 432 chr2L 16511917 16511996 chr2L 16519119 16519198 HMS-Beagle 8 7202 6.0 6.5 6.2 1.1 7281 chr2L 16511917 intron CG5953 - chr2L 16515558 intron CG5953 - chr2L 16519198 intron CG5953 - chr2L_8_16515001 chr2L_16515001 CanS-SH 433 chr2L 16529667 16529757 chr2L 16533496 16533586 11 3829 50.0 28.5 39.2 0.3 3919 chr2L 16529667 intron CG5953 - chr2L 16531626 intron CG5953 - chr2L 16533586 intergenic CR45354 - chr2L_11_16530001 chr2L_16530001 CanS-SH 434 chr2L 16548417 16548444 chr2L 16548614 16548641 10 197 17.0 1.5 9.2 1.0 224 chr2L 16548417 intron CG42389 + chr2L 16548529 intron CG42389 + chr2L 16548641 intron CG42389 + chr2L_10_16545001 chr2L_16545001 CanS-SH 435 chr2L 16589786 16589813 chr2L 16589951 16589978 10 165 2.0 19.0 10.5 0.9 192 chr2L 16589786 intron CG42389 + chr2L 16589882 intron CG42389 + chr2L 16589978 intron CG42389 + chr2L_10_16585001 chr2L_16585001 CanS-SH 436 chr2L 16629381 16629415 chr2L 16629580 16629614 7 199 7.0 9.5 8.2 0.8 233 chr2L 16629381 intron CG42389 + chr2L 16629498 intron CG42389 + chr2L 16629614 intron CG42389 + chr2L_7_16625001 chr2L_16625001 CanS-SH 437 chr2L 16654643 16654713 chr2L 16654811 16654881 23 168 7.0 10.0 8.5 2.4 238 chr2L 16654643 intron CG42389 + chr2L 16654762 intron CG42389 + chr2L 16654881 intron CG42389 + chr2L_23_16650001 chr2L_16650001 CanS-SH 438 chr2L 16670354 16670418 chr2L 16670506 16670570 21 152 10.5 11.0 10.8 1.8 216 chr2L 16670354 intron Trpgamma - chr2L 16670462 intron Trpgamma - chr2L 16670570 intron Trpgamma - chr2L_21_16670001 chr2L_16670001 CanS-SH 439 chr2L 16796068 16796101 chr2L 16796243 16796277 7 176 0.0 19.0 9.5 0.7 209 chr2L 16796068 intergenic Ugt36Ba + chr2L 16796172 intergenic Ugt36Ba +,Ugt36Bb + chr2L 16796277 intergenic Ugt36Ba +,Ugt36Bb + chr2L_7_16795001 chr2L_16795001 CanS-SH 440 chr2L 16816649 16816733 chr2L 16816882 16816966 20 233 7.0 7.0 7.0 2.5 317 chr2L 16816649 intron CG13280 - chr2L 16816808 intron,intron CG13280 -,mdy + chr2L 16816966 intron,intron CG13280 -,mdy + chr2L_20_16815001 chr2L_16815001 CanS-SH 441 chr2L 16852724 16852798 chr2L 16859940 16860015 Doc4-element 11 7216 41.0 9.0 25.0 0.4 7291 chr2L 16852724 intergenic CG31810 - chr2L 16856370 intron CG31809 - chr2L 16860015 intergenic CG6012 - chr2L_11_16855001 chr2L_16855001 CanS-SH 442 chr2L 16918202 16918240 chr2L 16918362 16918400 13 160 11.0 11.5 11.2 1.1 198 chr2L 16918202 intergenic not near genes chr2L 16918301 intergenic not near genes chr2L 16918400 intergenic not near genes chr2L_13_16915001 chr2L_16915001 CanS-SH 443 chr2L 16952623 16952670 chr2L 16952807 16952854 9 184 10.5 6.0 8.2 1.0 231 chr2L 16952623 intergenic not near genes chr2L 16952738 intergenic not near genes chr2L 16952854 intergenic not near genes chr2L_9_16950001 chr2L_16950001 CanS-SH 444 chr2L 16958044 16958082 chr2L 16962907 16962945 Doc 12 4863 16.5 7.5 12.0 0.9 4901 chr2L 16958044 intergenic not near genes chr2L 16960494 intergenic not near genes chr2L 16962945 intergenic not near genes chr2L_12_16960001 chr2L_16960001 CanS-SH 445 chr2L 17032446 17032523 chr2L 17032606 17032683 17 160 7.0 7.5 7.2 2.1 237 chr2L 17032446 intergenic not near genes chr2L 17032564 intergenic not near genes chr2L 17032683 intergenic not near genes chr2L_17_17030001 chr2L_17030001 CanS-SH 446 chr2L 17033843 17033929 chr2L 17034002 17034089 11 160 3.5 6.5 5.0 1.8 246 chr2L 17033843 intergenic not near genes chr2L 17033966 intergenic not near genes chr2L 17034089 intergenic not near genes chr2L_11_17030001 chr2L_17030001 CanS-SH 447 chr2L 17052343 17052389 chr2L 17052530 17052576 8 187 14.5 4.5 9.5 0.8 233 chr2L 17052343 intergenic not near genes chr2L 17052460 intergenic not near genes chr2L 17052576 intergenic not near genes chr2L_8_17050001 chr2L_17050001 CanS-SH 448 chr2L 17062689 17062764 chr2L 17062846 17062921 10 157 2.0 4.0 3.0 2.5 232 chr2L 17062689 intergenic not near genes chr2L 17062805 intergenic not near genes chr2L 17062921 intergenic not near genes chr2L_10_17060001 chr2L_17060001 CanS-SH 449 chr2L 17070123 17070180 chr2L 17070294 17070351 13 171 11.5 0.0 5.8 1.9 228 chr2L 17070123 intergenic not near genes chr2L 17070237 intergenic not near genes chr2L 17070351 intergenic not near genes chr2L_13_17070001 chr2L_17070001 CanS-SH 450 chr2L 17087314 17087352 chr2L 17087507 17087545 10 193 6.0 9.5 7.8 1.1 231 chr2L 17087314 intergenic CG12620 + chr2L 17087430 intergenic CG12620 + chr2L 17087545 intergenic CG12620 + chr2L_10_17085001 chr2L_17085001 CanS-SH 451 chr2L 17091977 17092000 chr2L 17092201 17092224 7 224 12.5 8.5 10.5 0.6 247 chr2L 17091977 intergenic not near genes chr2L 17092100 intergenic not near genes chr2L 17092224 intergenic not near genes chr2L_7_17090001 chr2L_17090001 CanS-SH 452 chr2L 17101077 17101099 chr2L 17101532 17101554 4 455 34.5 32.0 33.2 0.1 477 chr2L 17101077 intergenic not near genes chr2L 17101316 intergenic not near genes chr2L 17101554 intergenic not near genes chr2L_4_17100001 chr2L_17100001 CanS-SH 453 chr2L 17144267 17144300 chr2L 17152010 17152043 opus 9 7743 10.0 8.0 9.0 0.9 7776 chr2L 17144267 intron,intron CG34106 +,beat-IIIa + chr2L 17148155 intron,intron CG34106 +,beat-IIIa + chr2L 17152043 intron,intron CG34106 +,beat-IIIa + chr2L_9_17145001 chr2L_17145001 CanS-SH 454 chr2L 17167512 17167541 chr2L 17167828 17167857 pogo 4 316 7.0 9.5 8.2 0.4 345 chr2L 17167512 intron,intron CG34106 +,beat-IIIa + chr2L 17167684 intron,intron CG34106 +,beat-IIIa + chr2L 17167857 intron,intron CG34106 +,beat-IIIa + chr2L_4_17165001 chr2L_17165001 CanS-SH 455 chr2L 17199099 17199135 chr2L 17200641 17200677 hobo 9 1542 13.0 3.5 8.2 1.0 1578 chr2L 17199099 intron beat-IIIc - chr2L 17199888 intron beat-IIIc - chr2L 17200677 intron beat-IIIc - chr2L_9_17195001 chr2L_17195001 CanS-SH 456 chr2L 17273129 17273169 chr2L 17277987 17278027 F-element 13 4858 11.5 1.5 6.5 1.7 4898 chr2L 17273129 intergenic not near genes chr2L 17275578 intergenic not near genes chr2L 17278027 intergenic not near genes chr2L_13_17275001 chr2L_17275001 CanS-SH 457 chr2L 17292294 17292386 chr2L 17292449 17292542 10 155 3.0 9.0 6.0 1.4 248 chr2L 17292294 intergenic CG6380 - chr2L 17292418 intergenic CG6380 - chr2L 17292542 intergenic CG6380 - chr2L_10_17290001 chr2L_17290001 CanS-SH 458 chr2L 17310309 17310397 chr2L 17310470 17310566 10 166 0.0 6.5 3.2 2.4 257 chr2L 17310309 intergenic not near genes chr2L 17310438 intergenic not near genes chr2L 17310566 intergenic not near genes chr2L_10_17310001 chr2L_17310001 CanS-SH 459 chr2L 17316764 17316848 chr2L 17316916 17317003 21 155 6.5 6.5 6.5 2.8 239 chr2L 17316764 intergenic not near genes chr2L 17316884 intergenic not near genes chr2L 17317003 intergenic not near genes chr2L_21_17315001 chr2L_17315001 CanS-SH 460 chr2L 17319381 17319402 chr2L 17319555 17319576 7 174 12.5 9.0 10.8 0.6 195 chr2L 17319381 intergenic CR45696 - chr2L 17319478 intergenic CR45696 - chr2L 17319576 intergenic CR45696 - chr2L_7_17315001 chr2L_17315001 CanS-SH 461 chr2L 17327854 17327921 chr2L 17328015 17328082 27 161 8.5 13.0 10.8 2.3 228 chr2L 17327854 intergenic not near genes chr2L 17327968 intergenic not near genes chr2L 17328082 intergenic not near genes chr2L_27_17325001 chr2L_17325001 CanS-SH 462 chr2L 17339044 17339082 chr2L 17339395 17339433 9 351 12.5 4.0 8.2 1.0 389 chr2L 17339044 intergenic not near genes chr2L 17339238 intergenic not near genes chr2L 17339433 intergenic not near genes chr2L_9_17335001 chr2L_17335001 CanS-SH 463 chr2L 17379654 17379702 chr2L 17379814 17379862 16 160 5.5 10.5 8.0 1.8 208 chr2L 17379654 intron Lrch - chr2L 17379758 intron Lrch - chr2L 17379862 intron Lrch - chr2L_16_17375001 chr2L_17375001 CanS-SH 464 chr2L 17425704 17425781 chr2L 17425906 17425983 10 202 8.5 7.0 7.8 1.1 279 chr2L 17425704 intron Dif - chr2L 17425844 intron Dif - chr2L 17425983 intron Dif - chr2L_10_17425001 chr2L_17425001 CanS-SH 465 chr2L 17431944 17432040 chr2L 17432125 17432222 1360 6 182 0.0 9.0 4.5 1.1 278 chr2L 17431944 intron Dif - chr2L 17432083 intron Dif - chr2L 17432222 intron Dif - chr2L_6_17430001 chr2L_17430001 CanS-SH 466 chr2L 17517789 17517876 chr2L 17517947 17518034 23 158 8.0 5.0 6.5 3.1 245 chr2L 17517789 intron Dhc36C + chr2L 17517912 intron Dhc36C + chr2L 17518034 intron Dhc36C + chr2L_23_17515001 chr2L_17515001 CanS-SH 467 chr2L 17571081 17571162 chr2L 17571239 17571320 13 158 0.0 9.0 4.5 2.4 239 chr2L 17571081 intergenic not near genes chr2L 17571200 intergenic not near genes chr2L 17571320 intergenic not near genes chr2L_13_17570001 chr2L_17570001 CanS-SH 468 chr2L 17572058 17572102 chr2L 17572242 17572286 16 184 14.5 12.0 13.2 1.1 228 chr2L 17572058 intergenic not near genes chr2L 17572172 intergenic not near genes chr2L 17572286 intergenic not near genes chr2L_16_17570001 chr2L_17570001 CanS-SH 469 chr2L 17573190 17573259 chr2L 17573358 17573427 21 168 8.0 9.0 8.5 2.2 237 chr2L 17573190 intergenic not near genes chr2L 17573308 intergenic not near genes chr2L 17573427 intergenic not near genes chr2L_21_17570001 chr2L_17570001 CanS-SH 470 chr2L 17605000 17605052 chr2L 17605157 17605209 15 157 6.5 5.0 5.8 2.2 209 chr2L 17605000 intergenic not near genes chr2L 17605104 intergenic not near genes chr2L 17605209 intergenic not near genes chr2L_15_17605001 chr2L_17605001 CanS-SH 471 chr2L 17623606 17623640 chr2L 17623911 17623945 10 305 17.0 0.0 8.5 1.1 339 chr2L 17623606 intergenic not near genes chr2L 17623776 intergenic not near genes chr2L 17623945 intergenic not near genes chr2L_10_17620001 chr2L_17620001 CanS-SH 472 chr2L 17640710 17640789 chr2L 17640867 17640946 22 157 3.0 8.5 5.8 3.2 236 chr2L 17640710 intergenic not near genes chr2L 17640828 intergenic not near genes chr2L 17640946 intergenic not near genes chr2L_22_17640001 chr2L_17640001 CanS-SH 473 chr2L 17687454 17687518 chr2L 17692274 17692338 F-element 11 4820 4.5 9.0 6.8 1.4 4884 chr2L 17687454 intron CadN - chr2L 17689896 intron CadN - chr2L 17692338 intron CadN - chr2L_11_17685001 chr2L_17685001 CanS-SH 474 chr2L 17723713 17723773 chr2L 17723881 17723941 7 168 8.5 6.5 7.5 0.8 228 chr2L 17723713 intron CadN - chr2L 17723827 intron CadN - chr2L 17723941 intron CadN - chr2L_7_17720001 chr2L_17720001 CanS-SH 475 chr2L 17727793 17727818 chr2L 17729335 17729360 hobo 7 1542 10.0 7.0 8.5 0.7 1567 chr2L 17727793 intron CadN - chr2L 17728576 intron CadN - chr2L 17729360 intron CadN - chr2L_7_17725001 chr2L_17725001 CanS-SH 476 chr2L 17784585 17784643 chr2L 17784758 17784816 9 173 14.5 6.5 10.5 0.8 231 chr2L 17784585 intergenic not near genes chr2L 17784700 intergenic not near genes chr2L 17784816 intergenic not near genes chr2L_9_17780001 chr2L_17780001 CanS-SH 477 chr2L 17819860 17819894 chr2L 17825138 17825172 copia 9 5278 16.0 8.0 12.0 0.7 5312 chr2L 17819860 intron CadN2 - chr2L 17822516 intron CadN2 - chr2L 17825172 intron CadN2 - chr2L_9_17820001 chr2L_17820001 CanS-SH 478 chr2L 17859551 17859638 chr2L 17859711 17859799 19 161 11.5 6.5 9.0 1.9 248 chr2L 17859551 intron CadN2 - chr2L 17859675 intron CadN2 - chr2L 17859799 intron CadN2 - chr2L_19_17855001 chr2L_17855001 CanS-SH 479 chr2L 17879968 17880024 chr2L 17880130 17880186 13 162 2.0 5.0 3.5 2.9 218 chr2L 17879968 intergenic not near genes chr2L 17880077 intergenic not near genes chr2L 17880186 intergenic not near genes chr2L_13_17880001 chr2L_17880001 CanS-SH 480 chr2L 17911898 17911932 chr2L 17914151 17914185 pogo 8 2253 13.0 8.0 10.5 0.7 2287 chr2L 17911898 intergenic not near genes chr2L 17913042 intergenic not near genes chr2L 17914185 intergenic CG43271 - chr2L_8_17910001 chr2L_17910001 CanS-SH 481 chr2L 17931321 17931416 chr2L 17931571 17931666 21 250 3.0 7.5 5.2 3.4 345 chr2L 17931321 intergenic not near genes chr2L 17931494 intergenic not near genes chr2L 17931666 intergenic not near genes chr2L_21_17930001 chr2L_17930001 CanS-SH 482 chr2L 17951884 17951918 chr2L 17953426 17953460 hobo 9 1542 14.5 8.0 11.2 0.7 1576 chr2L 17951884 intergenic CR44398 -,CR44397 - chr2L 17952672 intergenic not near genes chr2L 17953460 intergenic not near genes chr2L_9_17950001 chr2L_17950001 CanS-SH 483 chr2L 18040662 18040740 chr2L 18040826 18040904 25 164 7.5 5.0 6.2 3.5 242 chr2L 18040662 intron rdo + chr2L 18040783 intron rdo + chr2L 18040904 intron rdo + chr2L_25_18040001 chr2L_18040001 CanS-SH 484 chr2L 18041370 18041452 chr2L 18041714 18041795 10 344 9.5 8.5 9.0 1.0 425 chr2L 18041370 intron rdo + chr2L 18041582 intron rdo + chr2L 18041795 intron rdo + chr2L_10_18040001 chr2L_18040001 CanS-SH 485 chr2L 18046987 18047032 chr2L 18047144 18047189 9 157 5.0 8.0 6.5 1.2 202 chr2L 18046987 intron rdo + chr2L 18047088 intron rdo + chr2L 18047189 intron rdo + chr2L_9_18045001 chr2L_18045001 CanS-SH 486 chr2L 18051817 18051853 chr2L 18061039 18061075 roo 18 9222 18.0 10.5 14.2 1.2 9258 chr2L 18051817 intron rdo + chr2L 18056446 intron rdo + chr2L 18061075 intron rdo + chr2L_18_18055001 chr2L_18055001 CanS-SH 487 chr2L 18110013 18110106 chr2L 18110188 18110281 16 175 9.0 4.0 6.5 2.1 268 chr2L 18110013 intergenic not near genes chr2L 18110147 intergenic not near genes chr2L 18110281 intergenic not near genes chr2L_16_18110001 chr2L_18110001 CanS-SH 488 chr2L 18111183 18111189 chr2L 18111349 18111355 6 166 19.0 9.5 14.2 0.4 172 chr2L 18111183 intergenic not near genes chr2L 18111269 intergenic not near genes chr2L 18111355 intergenic not near genes chr2L_6_18110001 chr2L_18110001 CanS-SH 489 chr2L 18250509 18250529 chr2L 18250696 18250716 7 187 9.0 8.5 8.8 0.7 207 chr2L 18250509 intron CG42750 - chr2L 18250612 intron CG42750 - chr2L 18250716 intron CG42750 - chr2L_7_18250001 chr2L_18250001 CanS-SH 490 chr2L 18407980 18407999 chr2L 18412838 18412858 Doc 4 4859 13.0 11.5 12.2 0.3 4878 chr2L 18407980 intergenic not near genes chr2L 18410419 intergenic not near genes chr2L 18412858 intergenic not near genes chr2L_4_18410001 chr2L_18410001 CanS-SH 491 chr2L 18442030 18442073 chr2L 18442237 18442280 14 207 14.0 9.5 11.8 1.1 250 chr2L 18442030 3` UTR RpS26 - chr2L 18442155 3` UTR RpS26 - chr2L 18442280 3` UTR RpS26 - chr2L_14_18440001 chr2L_18440001 CanS-SH 492 chr2L 18443791 18443863 chr2L 18443946 18444018 18 155 5.5 0.0 2.8 4.7 227 chr2L 18443791 intergenic not near genes chr2L 18443904 intergenic not near genes chr2L 18444018 intergenic ncm - chr2L_18_18440001 chr2L_18440001 CanS-SH 493 chr2L 18629325 18629387 chr2L 18629485 18629547 21 160 0.0 8.5 4.2 4.0 222 chr2L 18629325 intron MESR3 + chr2L 18629436 intron MESR3 + chr2L 18629547 intron MESR3 + chr2L_21_18625001 chr2L_18625001 CanS-SH 494 chr2L 18766386 18766466 chr2L 18766582 18766658 7 195 7.0 0.5 3.8 1.5 272 chr2L 18766386 intron ham - chr2L 18766522 intron ham - chr2L 18766658 intron ham - chr2L_7_18765001 chr2L_18765001 CanS-SH 495 chr2L 18811360 18811438 chr2L 18811517 18811595 32 157 7.5 7.0 7.2 3.9 235 chr2L 18811360 intergenic CG10570 -,CG42502 - chr2L 18811478 intergenic CG10570 -,CG42502 - chr2L 18811595 intergenic not near genes chr2L_32_18810001 chr2L_18810001 CanS-SH 496 chr2L 18883795 18883869 chr2L 18883952 18884026 17 157 11.0 8.0 9.5 1.6 231 chr2L 18883795 intergenic not near genes chr2L 18883910 intergenic not near genes chr2L 18884026 intergenic not near genes chr2L_17_18880001 chr2L_18880001 CanS-SH 497 chr2L 18900667 18900750 chr2L 18900829 18900911 13 161 5.0 3.5 4.2 2.5 244 chr2L 18900667 intergenic CR44739 - chr2L 18900789 intergenic CR44739 - chr2L 18900911 intergenic CR44739 - chr2L_13_18900001 chr2L_18900001 CanS-SH 498 chr2L 19145123 19145137 chr2L 19145284 19145299 9 162 18.5 8.5 13.5 0.6 176 chr2L 19145123 intron brat + chr2L 19145211 intron brat + chr2L 19145299 intron brat + chr2L_9_19145001 chr2L_19145001 CanS-SH 499 chr2L 19147306 19147340 chr2L 19154416 19154450 297 14 7110 16.5 11.0 13.8 0.9 7144 chr2L 19147306 intron brat + chr2L 19150878 intron brat + chr2L 19154450 intron brat + chr2L_14_19150001 chr2L_19150001 CanS-SH 500 chr2L 19270846 19270914 chr2L 19271011 19271079 8 165 0.0 14.0 7.0 1.0 233 chr2L 19270846 intron CR44190 - chr2L 19270962 intron CR44190 - chr2L 19271079 intron CR44190 - chr2L_8_19270001 chr2L_19270001 CanS-SH 501 chr2L 19272439 19272444 chr2L 19272683 19272688 BS 4 244 13.5 0.0 6.8 0.5 249 chr2L 19272439 intron CR44190 - chr2L 19272564 intron CR44190 - chr2L 19272688 intron CR44190 - chr2L_4_19270001 chr2L_19270001 CanS-SH 502 chr2L 19337941 19338007 chr2L 19338106 19338172 19 165 12.5 9.0 10.8 1.6 231 chr2L 19337941 intergenic not near genes chr2L 19338056 intergenic not near genes chr2L 19338172 intergenic dnt - chr2L_19_19335001 chr2L_19335001 CanS-SH 503 chr2L 19344957 19344988 chr2L 19357241 19357272 blood 12 12284 11.5 8.5 10.0 1.1 12315 chr2L 19344957 intron dnt - chr2L 19351114 intron dnt - chr2L 19357272 intron dnt - chr2L_12_19350001 chr2L_19350001 CanS-SH 504 chr2L 19357485 19357537 chr2L 19357650 19357702 17 165 9.0 13.5 11.2 1.4 217 chr2L 19357485 intron dnt - chr2L 19357594 intron dnt - chr2L 19357702 intron dnt - chr2L_17_19355001 chr2L_19355001 CanS-SH 505 chr2L 19365498 19365565 chr2L 19365649 19365715 6 151 2.0 12.0 7.0 0.8 217 chr2L 19365498 intergenic CG13086 + chr2L 19365606 intergenic CG13086 + chr2L 19365715 intergenic CG13086 + chr2L_6_19365001 chr2L_19365001 CanS-SH 506 chr2L 19380433 19380529 chr2L 19380588 19380684 19 155 6.5 6.5 6.5 2.5 251 chr2L 19380433 intergenic CG17350 + chr2L 19380558 intergenic CG17350 + chr2L 19380684 intergenic CG17350 + chr2L_19_19380001 chr2L_19380001 CanS-SH 507 chr2L 19383932 19383981 chr2L 19384108 19384157 17 176 14.0 9.0 11.5 1.4 225 chr2L 19383932 exon fon - chr2L 19384044 exon fon - chr2L 19384157 exon fon - chr2L_17_19380001 chr2L_19380001 CanS-SH 508 chr2L 19405543 19405603 chr2L 19405707 19405768 10 164 15.0 4.5 9.8 0.9 225 chr2L 19405543 intron Pax - chr2L 19405656 intron Pax - chr2L 19405768 intron Pax - chr2L_10_19405001 chr2L_19405001 CanS-SH 509 chr2L 19407645 19407689 chr2L 19407917 19407961 13 272 13.0 5.5 9.2 1.3 316 chr2L 19407645 intron Pax - chr2L 19407803 intron Pax - chr2L 19407961 intron Pax - chr2L_13_19405001 chr2L_19405001 CanS-SH 510 chr2L 19410619 19410630 chr2L 19410770 19410781 8 151 20.5 9.5 15.0 0.5 162 chr2L 19410619 exon Pax - chr2L 19410700 intron Pax - chr2L 19410781 intron Pax - chr2L_8_19410001 chr2L_19410001 CanS-SH 511 chr2L 19559933 19559979 chr2L 19560261 19560307 13 328 18.0 10.0 14.0 0.9 374 chr2L 19559933 exon Tep5 + chr2L 19560120 exon Tep5 + chr2L 19560307 intron Tep5 + chr2L_13_19560001 chr2L_19560001 CanS-SH 512 chr2L 19608534 19608584 chr2L 19608700 19608750 13 166 9.5 1.0 5.2 2.1 216 chr2L 19608534 intron Lar + chr2L 19608642 intron Lar + chr2L 19608750 intron Lar + chr2L_13_19605001 chr2L_19605001 CanS-SH 513 chr2L 19609581 19609642 chr2L 19609750 19609811 22 169 7.5 9.5 8.5 2.3 230 chr2L 19609581 intron Lar + chr2L 19609696 intron Lar + chr2L 19609811 intron Lar + chr2L_22_19605001 chr2L_19605001 CanS-SH 514 chr2L 19620035 19620069 chr2L 19621099 19621133 jockey 13 1064 19.5 9.0 14.2 0.9 1098 chr2L 19620035 intron Lar + chr2L 19620584 intron Lar + chr2L 19621133 intron Lar + chr2L_13_19620001 chr2L_19620001 CanS-SH 515 chr2L 19652510 19652549 chr2L 19674019 19674058 opus 15 21509 16.0 9.5 12.8 1.1 21548 chr2L 19652510 intron Lar + chr2L 19663284 intron Lar + chr2L 19674058 intron Lar + chr2L_15_19660001 chr2L_19660001 CanS-SH 516 chr2L 19697075 19697146 chr2L 19697243 19697314 14 168 8.5 5.5 7.0 1.8 239 chr2L 19697075 intron Lar + chr2L 19697194 intron Lar + chr2L 19697314 intron Lar + chr2L_14_19695001 chr2L_19695001 CanS-SH 517 chr2L 19703479 19703568 chr2L 19712690 19712810 roo 13 9218 8.5 0.0 4.2 2.5 9331 chr2L 19703479 intron Lar + chr2L 19708144 intron Lar + chr2L 19712810 intron Lar + chr2L_13_19705001 chr2L_19705001 CanS-SH 518 chr2L 19712675 19712706 chr2L 19712834 19712865 15 159 0.0 18.0 9.0 1.5 190 chr2L 19712675 intron Lar + chr2L 19712770 intron Lar + chr2L 19712865 intron Lar + chr2L_15_19710001 chr2L_19710001 CanS-SH 519 chr2L 19737293 19737321 chr2L 19740837 19740865 1360 8 3544 17.5 10.0 13.8 0.5 3572 chr2L 19737293 intergenic Nf-YB + chr2L 19739079 intergenic not near genes chr2L 19740865 intergenic not near genes chr2L_8_19735001 chr2L_19735001 CanS-SH 520 chr2L 19762744 19762782 chr2L 19763061 19763099 pogo 7 317 13.0 8.5 10.8 0.6 355 chr2L 19762744 exon fbp - chr2L 19762922 intron fbp - chr2L 19763099 intron fbp - chr2L_7_19760001 chr2L_19760001 CanS-SH 521 chr2L 19765043 19765066 chr2L 19765253 19765276 5 210 14.0 6.5 10.2 0.4 233 chr2L 19765043 intergenic not near genes chr2L 19765160 intergenic not near genes chr2L 19765276 intergenic bsh - chr2L_5_19765001 chr2L_19765001 CanS-SH 522 chr2L 19773100 19773186 chr2L 19773262 19773348 20 162 9.0 8.5 8.8 2.0 248 chr2L 19773100 intergenic not near genes chr2L 19773224 intergenic not near genes chr2L 19773348 intergenic not near genes chr2L_20_19770001 chr2L_19770001 CanS-SH 523 chr2L 19824344 19824403 chr2L 19824502 19824561 16 158 5.5 12.0 8.8 1.6 217 chr2L 19824344 intron sick + chr2L 19824452 intron sick + chr2L 19824561 intron sick + chr2L_16_19820001 chr2L_19820001 CanS-SH 524 chr2L 19837248 19837291 chr2L 19837403 19837445 12 154 8.5 11.5 10.0 1.1 197 chr2L 19837248 intron sick + chr2L 19837346 intron sick + chr2L 19837445 intron sick + chr2L_12_19835001 chr2L_19835001 CanS-SH 525 chr2L 19846206 19846264 chr2L 19846363 19846420 12 156 1.0 5.5 3.2 2.9 214 chr2L 19846206 intron sick + chr2L 19846313 intron sick + chr2L 19846420 intron sick + chr2L_12_19845001 chr2L_19845001 CanS-SH 526 chr2L 19901425 19901481 chr2L 19901603 19901659 21 178 6.0 12.0 9.0 2.1 234 chr2L 19901425 intron sick + chr2L 19901542 intron sick + chr2L 19901659 intron sick + chr2L_21_19900001 chr2L_19900001 CanS-SH 527 chr2L 19911222 19911295 chr2L 19911385 19911458 33 163 5.5 4.0 4.8 5.7 236 chr2L 19911222 intron,3` UTR sick +,CR43097 - chr2L 19911340 intron,3` UTR sick +,CR43097 - chr2L 19911458 intron,3` UTR sick +,CR43097 - chr2L_33_19910001 chr2L_19910001 CanS-SH 528 chr2L 19950150 19950181 chr2L 19950307 19950338 15 157 10.0 6.5 8.2 1.6 188 chr2L 19950150 intron sick + chr2L 19950244 intron sick + chr2L 19950338 intron sick + chr2L_15_19950001 chr2L_19950001 CanS-SH 529 chr2L 20005816 20005854 chr2L 20010967 20011005 flea 16 5151 15.5 6.5 11.0 1.3 5189 chr2L 20005816 intron CG43861 - chr2L 20008410 intron CG43861 - chr2L 20011005 intron CG43861 - chr2L_16_20005001 chr2L_20005001 CanS-SH 530 chr2L 20045139 20045146 chr2L 20045295 20045302 4 156 17.0 9.5 13.2 0.3 163 chr2L 20045139 intron sNPF + chr2L 20045220 intron sNPF + chr2L 20045302 intron sNPF + chr2L_4_20045001 chr2L_20045001 CanS-SH 531 chr2L 20064159 20064228 chr2L 20064320 20064390 21 161 8.0 8.5 8.2 2.3 231 chr2L 20064159 3` UTR lok + chr2L 20064274 3` UTR,3` UTR lok +,vls - chr2L 20064390 exon vls - chr2L_21_20060001 chr2L_20060001 CanS-SH 532 chr2L 20079454 20079547 chr2L 20079650 20079743 22 196 6.0 8.0 7.0 2.8 289 chr2L 20079454 intron,exon neb +,fok - chr2L 20079598 intron,intron neb +,fok - chr2L 20079743 intron,intron neb +,fok - chr2L_22_20075001 chr2L_20075001 CanS-SH 533 chr2L 20098986 20099021 chr2L 20099138 20099173 11 152 19.5 7.0 13.2 0.8 187 chr2L 20098986 intron Kua + chr2L 20099080 intron Kua + chr2L 20099173 intron Kua + chr2L_11_20095001 chr2L_20095001 CanS-SH 534 chr2L 20124290 20124356 chr2L 20124443 20124509 15 153 4.0 9.0 6.5 2.0 219 chr2L 20124290 intergenic not near genes chr2L 20124400 intergenic not near genes chr2L 20124509 intergenic not near genes chr2L_15_20120001 chr2L_20120001 CanS-SH 535 chr2L 20272063 20272090 chr2L 20282849 20282876 copia 8 10786 14.0 10.5 12.2 0.6 10813 chr2L 20272063 intergenic not near genes chr2L 20277470 intergenic not near genes chr2L 20282876 intergenic not near genes chr2L_8_20275001 chr2L_20275001 CanS-SH 536 chr2L 20296447 20296529 chr2L 20296603 20296685 31 156 1.0 8.5 4.8 5.3 238 chr2L 20296447 intergenic CR43414 - chr2L 20296566 intergenic CR43414 - chr2L 20296685 3` UTR CR43414 - chr2L_31_20295001 chr2L_20295001 CanS-SH 537 chr2L 20303105 20303119 chr2L 20310632 20310646 blood 4 7527 9.5 9.0 9.2 0.4 7541 chr2L 20303105 intergenic not near genes chr2L 20306876 intergenic not near genes chr2L 20310646 intergenic not near genes chr2L_4_20305001 chr2L_20305001 CanS-SH 538 chr2L 20310810 20310883 chr2L 20310964 20311037 13 154 11.5 7.5 9.5 1.2 227 chr2L 20310810 intergenic spir + chr2L 20310924 intergenic spir + chr2L 20311037 intergenic spir + chr2L_13_20310001 chr2L_20310001 CanS-SH 539 chr2L 20315638 20315707 chr2L 20315806 20315875 17 168 9.0 5.5 7.2 2.1 237 chr2L 20315638 intron spir + chr2L 20315756 intron spir + chr2L 20315875 intron spir + chr2L_17_20315001 chr2L_20315001 CanS-SH 540 chr2L 20340765 20340823 chr2L 20340918 20340976 28 153 14.0 13.0 13.5 1.9 211 chr2L 20340765 intron spir + chr2L 20340870 intron spir + chr2L 20340976 intron spir + chr2L_28_20340001 chr2L_20340001 CanS-SH 541 chr2L 20498618 20498675 chr2L 20498792 20498849 21 174 11.5 9.5 10.5 1.8 231 chr2L 20498618 intergenic not near genes chr2L 20498734 intergenic not near genes chr2L 20498849 intergenic not near genes chr2L_21_20495001 chr2L_20495001 CanS-SH 542 chr2L 20568592 20568633 chr2L 20569057 20569098 X-element 16 465 13.0 7.0 10.0 1.5 506 chr2L 20568592 intron CR45347 + chr2L 20568845 intron CR45347 + chr2L 20569098 intron CR45347 + chr2L_16_20565001 chr2L_20565001 CanS-SH 543 chr2L 20576155 20576201 chr2L 20583698 20583744 blood 20 7543 6.5 10.0 8.2 2.2 7589 chr2L 20576155 intergenic CR45347 + chr2L 20579950 intergenic not near genes chr2L 20583744 3` UTR CR44909 - chr2L_20_20575001 chr2L_20575001 CanS-SH 544 chr2L 20611161 20611247 chr2L 20611328 20611411 13 166 5.0 8.5 6.8 1.7 250 chr2L 20611161 intron CR44909 - chr2L 20611286 intron CR44909 - chr2L 20611411 intron CR44909 - chr2L_13_20610001 chr2L_20610001 CanS-SH 545 chr2L 20643272 20643338 chr2L 20643479 20643545 14 207 10.5 9.5 10.0 1.3 273 chr2L 20643272 intergenic CG17470 -,phr6-4 - chr2L 20643408 3` UTR phr6-4 - chr2L 20643545 3` UTR phr6-4 - chr2L_14_20640001 chr2L_20640001 CanS-SH 546 chr2L 20674787 20674844 chr2L 20674941 20674996 9 153 12.0 9.0 10.5 0.8 209 chr2L 20674787 intron CG31678 - chr2L 20674892 intron CG31678 - chr2L 20674996 exon CG31678 - chr2L_9_20670001 chr2L_20670001 CanS-SH 547 chr2L 20695727 20695819 chr2L 20695890 20695982 27 163 10.5 10.0 10.2 2.4 255 chr2L 20695727 intron Hr38 - chr2L 20695854 intron Hr38 - chr2L 20695982 intron Hr38 - chr2L_27_20695001 chr2L_20695001 CanS-SH 548 chr2L 20712322 20712327 chr2L 20712537 20712542 4 215 17.5 17.0 17.2 0.2 220 chr2L 20712322 intron Hr38 - chr2L 20712432 intron Hr38 - chr2L 20712542 intron Hr38 - chr2L_4_20710001 chr2L_20710001 CanS-SH 549 chr2L 20717103 20717108 chr2L 20717352 20717357 4 249 19.5 10.0 14.8 0.3 254 chr2L 20717103 intergenic not near genes chr2L 20717230 intergenic not near genes chr2L 20717357 intergenic not near genes chr2L_4_20715001 chr2L_20715001 CanS-SH 550 chr2L 20819043 20819130 chr2L 20819205 20819289 27 160 11.5 9.5 10.5 2.3 246 chr2L 20819043 intergenic not near genes chr2L 20819166 intergenic not near genes chr2L 20819289 intergenic not near genes chr2L_27_20815001 chr2L_20815001 CanS-SH 551 chr2L 20821439 20821517 chr2L 20821662 20821740 16 223 7.5 5.0 6.2 2.2 301 chr2L 20821439 intergenic not near genes chr2L 20821590 intergenic not near genes chr2L 20821740 intergenic not near genes chr2L_16_20820001 chr2L_20820001 CanS-SH 552 chr2L 20835745 20835783 chr2L 20836536 20836575 Quasimodo 11 792 13.0 7.5 10.2 1.0 830 chr2L 20835745 5` UTR Oseg5 - chr2L 20836160 intergenic Oseg5 -,Spn38F - chr2L 20836575 intergenic Spn38F - chr2L_11_20835001 chr2L_20835001 CanS-SH 553 chr2L 20839961 20839999 chr2L 20840248 20840286 19 287 14.5 12.0 13.2 1.3 325 chr2L 20839961 intergenic not near genes chr2L 20840124 intergenic not near genes chr2L 20840286 intergenic CG31676 + chr2L_19_20840001 chr2L_20840001 CanS-SH 554 chr2L 20891459 20891546 chr2L 20896635 20896722 jockey 21 5176 4.0 8.5 6.2 2.9 5263 chr2L 20891459 intron,intron CG43739 -,sky - chr2L 20894090 intron,intron CG43739 -,sky - chr2L 20896722 intron,intron CG43739 -,sky - chr2L_21_20890001 chr2L_20890001 CanS-SH 555 chr2L 20901388 20901425 chr2L 20902627 20902664 1360 7 1239 12.5 11.5 12.0 0.5 1276 chr2L 20901388 intron,intron CG43739 -,sky - chr2L 20902026 intron,intron CG43739 -,sky - chr2L 20902664 intron,intron CG43739 -,sky - chr2L_7_20900001 chr2L_20900001 CanS-SH 556 chr2L 20928846 20928860 chr2L 20929461 20929475 8 615 16.5 17.5 17.0 0.4 629 chr2L 20928846 intergenic not near genes chr2L 20929160 intergenic CG9270 - chr2L 20929475 3` UTR CG9270 - chr2L_8_20925001 chr2L_20925001 CanS-SH 557 chr2L 20967007 20967108 chr2L 20967168 20967269 30 161 5.0 8.0 6.5 4.0 262 chr2L 20967007 3` UTR CG42238 - chr2L 20967138 3` UTR CG42238 - chr2L 20967269 3` UTR CG42238 - chr2L_30_20965001 chr2L_20965001 CanS-SH 558 chr2L 20976588 20976618 chr2L 20981478 20981508 X-element 12 4890 22.5 6.0 14.2 0.8 4920 chr2L 20976588 intron CG42238 - chr2L 20979048 intron CG42238 - chr2L 20981508 intron CG42238 - chr2L_12_20975001 chr2L_20975001 CanS-SH 559 chr2L 21020217 21020255 chr2L 21023969 21024007 NOF 12 3752 17.5 10.0 13.8 0.8 3790 chr2L 21020217 intron CG42238 - chr2L 21022112 intron CG42238 - chr2L 21024007 intron CG42238 - chr2L_12_21020001 chr2L_21020001 CanS-SH 560 chr2L 21041075 21041113 chr2L 21049411 21049449 Tirant 14 8336 12.5 12.0 12.2 1.1 8374 chr2L 21041075 intron CG42238 - chr2L 21045262 intron CG42238 - chr2L 21049449 intron CG42238 - chr2L_14_21045001 chr2L_21045001 CanS-SH 561 chr2L 21074860 21074942 chr2L 21075026 21075108 14 166 7.0 13.0 10.0 1.3 248 chr2L 21074860 intergenic not near genes chr2L 21074984 intergenic tadr + chr2L 21075108 intergenic tadr + chr2L_14_21070001 chr2L_21070001 CanS-SH 562 chr2L 21109588 21109649 chr2L 21109754 21109815 14 166 14.0 10.0 12.0 1.1 227 chr2L 21109588 intron Nhe2 + chr2L 21109702 intron Nhe2 + chr2L 21109815 intron Nhe2 + chr2L_14_21105001 chr2L_21105001 CanS-SH 563 chr2L 21110590 21110670 chr2L 21110749 21110830 36 160 7.0 9.0 8.0 4.0 240 chr2L 21110590 intron Nhe2 + chr2L 21110710 intron Nhe2 + chr2L 21110830 intron Nhe2 + chr2L_36_21110001 chr2L_21110001 CanS-SH 564 chr2L 21154142 21154175 chr2L 21154294 21154327 12 152 7.0 18.0 12.5 0.9 185 chr2L 21154142 intergenic E2f2 - chr2L 21154234 intergenic E2f2 - chr2L 21154327 3` UTR E2f2 - chr2L_12_21150001 chr2L_21150001 CanS-SH 565 chr2L 21286589 21286623 chr2L 21286743 21286777 13 154 7.5 18.0 12.8 0.9 188 chr2L 21286589 exon Mio - chr2L 21286683 intron Mio - chr2L 21286777 intron Mio - chr2L_13_21285001 chr2L_21285001 CanS-SH 566 chr2L 21337793 21337815 chr2L 21338333 21338355 BS 8 540 17.5 7.5 12.5 0.6 562 chr2L 21337793 intron dimm + chr2L 21338074 intron dimm + chr2L 21338355 intron dimm + chr2L_8_21335001 chr2L_21335001 CanS-SH 567 chr2L 21347501 21347530 chr2L 21355047 21355076 blood 12 7546 15.0 0.5 7.8 1.4 7575 chr2L 21347501 intron Tsp39D + chr2L 21351288 intron Tsp39D + chr2L 21355076 intron Tsp39D + chr2L_12_21350001 chr2L_21350001 CanS-SH 568 chr2L 21596982 21596992 chr2L 21604801 21604811 roo 5 7819 18.0 11.5 14.8 0.3 7829 chr2L 21596982 intergenic not near genes chr2L 21600896 intergenic not near genes chr2L 21604811 intergenic not near genes chr2L_5_21600001 chr2L_21600001 CanS-SH 569 chr2L 21757515 21757574 chr2L 21757671 21757730 19 156 9.0 10.5 9.8 1.8 215 chr2L 21757515 intergenic step -,CG1416 + chr2L 21757622 intergenic step -,CG1416 + chr2L 21757730 intergenic step -,CG1416 + chr2L_19_21755001 chr2L_21755001 CanS-SH 570 chr2L 21806167 21806218 chr2L 21806345 21806396 18 178 13.5 9.0 11.2 1.5 229 chr2L 21806167 intergenic not near genes chr2L 21806282 intergenic not near genes chr2L 21806396 intergenic not near genes chr2L_18_21805001 chr2L_21805001 CanS-SH 571 chr2L 21852307 21852349 chr2L 21852697 21852739 16 390 12.0 10.5 11.2 1.3 432 chr2L 21852307 intergenic not near genes chr2L 21852523 intergenic not near genes chr2L 21852739 intergenic not near genes chr2L_16_21850001 chr2L_21850001 CanS-SH 572 chr2L 21855412 21855487 chr2L 21855573 21855649 14 162 9.5 8.5 9.0 1.4 237 chr2L 21855412 5` UTR CR44917 + chr2L 21855530 intron CR44917 + chr2L 21855649 intron CR44917 + chr2L_14_21855001 chr2L_21855001 CanS-SH 573 chr2L 21859260 21859295 chr2L 21859415 21859450 6 155 16.5 9.0 12.8 0.4 190 chr2L 21859260 intron CR44917 + chr2L 21859355 intron CR44917 + chr2L 21859450 intron CR44917 + chr2L_6_21855001 chr2L_21855001 CanS-SH 574 chr2L 21903233 21903270 chr2L 21903434 21903471 4 201 16.5 5.0 10.8 0.3 238 chr2L 21903233 exon CG1421 + chr2L 21903352 exon CG1421 + chr2L 21903471 exon CG1421 + chr2L_4_21900001 chr2L_21900001 CanS-SH 575 chr2L 21981629 21981658 chr2L 21990869 21990898 roo 12 9240 14.0 8.0 11.0 1.0 9269 chr2L 21981629 exon CG2528 - chr2L 21986264 intron CG2528 - chr2L 21990898 exon CG2528 - chr2L_12_21985001 chr2L_21985001 CanS-SH 576 chr2L 22001590 22001618 chr2L 22001741 22001769 7 151 16.0 9.0 12.5 0.5 179 chr2L 22001590 intergenic not near genes chr2L 22001680 intergenic not near genes chr2L 22001769 intergenic not near genes chr2L_7_22000001 chr2L_22000001 CanS-SH 577 chr2L 22007876 22007951 chr2L 22008033 22008108 15 157 3.0 8.0 5.5 2.3 232 chr2L 22007876 intergenic not near genes chr2L 22007992 intergenic not near genes chr2L 22008108 intergenic not near genes chr2L_15_22005001 chr2L_22005001 CanS-SH 578 chr2L 22047181 22047257 chr2L 22047381 22047457 12 200 5.0 4.0 4.5 2.2 276 chr2L 22047181 intergenic not near genes chr2L 22047319 intergenic not near genes chr2L 22047457 intergenic not near genes chr2L_12_22045001 chr2L_22045001 CanS-SH 579 chr2L 22049567 22049751 chr2L 22049737 22049951 5 194 0.0 0.0 0.0 5.0 384 chr2L 22049567 intergenic not near genes chr2L 22049759 intergenic not near genes chr2L 22049951 intergenic not near genes chr2L_5_22045001 chr2L_22045001 CanS-SH 580 chr2L 22082187 22082211 chr2L 22082408 22082432 INE-1 10 221 9.5 4.0 6.8 1.3 245 chr2L 22082187 intergenic not near genes chr2L 22082310 intergenic not near genes chr2L 22082432 intergenic not near genes chr2L_10_22080001 chr2L_22080001 CanS-SH 581 chr2L 22093269 22093347 chr2L 22093427 22093505 25 158 12.5 8.0 10.2 2.2 236 chr2L 22093269 intergenic not near genes chr2L 22093387 intergenic not near genes chr2L 22093505 intergenic not near genes chr2L_25_22090001 chr2L_22090001 CanS-SH 582 chr2L 22127211 22127264 chr2L 22127565 22127618 6 354 5.5 14.5 10.0 0.5 407 chr2L 22127211 3` UTR CycK - chr2L 22127414 3` UTR CycK - chr2L 22127618 3` UTR CycK - chr2L_6_22125001 chr2L_22125001 CanS-SH 583 chr2L 22150617 22150642 chr2L 22150781 22150806 7 164 9.0 18.0 13.5 0.5 189 chr2L 22150617 intron CG42748 + chr2L 22150712 intron CG42748 + chr2L 22150806 intron CG42748 + chr2L_7_22150001 chr2L_22150001 CanS-SH 584 chr2L 22155352 22155446 chr2L 22155693 22155787 17 341 5.0 10.5 7.8 1.9 435 chr2L 22155352 exon CG42748 + chr2L 22155570 intron CG42748 + chr2L 22155787 intron CG42748 + chr2L_17_22155001 chr2L_22155001 CanS-SH 585 chr2L 22215849 22215921 chr2L 22216010 22216082 15 161 10.0 10.0 10.0 1.4 233 chr2L 22215849 intergenic not near genes chr2L 22215966 intergenic not near genes chr2L 22216082 intergenic not near genes chr2L_15_22215001 chr2L_22215001 CanS-SH 586 chr2L 22258556 22258581 chr2L 22260755 22260780 G6 10 2199 12.0 12.0 12.0 0.8 2224 chr2L 22258556 intergenic Tif-IA + chr2L 22259668 intergenic not near genes chr2L 22260780 intergenic not near genes chr2L_10_22255001 chr2L_22255001 CanS-SH 587 chr2L 22294286 22294367 chr2L 22294449 22294530 31 163 8.5 6.0 7.2 3.8 244 chr2L 22294286 intergenic not near genes chr2L 22294408 intergenic not near genes chr2L 22294530 intergenic not near genes chr2L_31_22290001 chr2L_22290001 CanS-SH 588 chr2L 22515082 22515105 chr2L 22522607 22522630 HMS-Beagle2 9 7525 13.5 0.0 6.8 1.2 7548 chr2L 22515082 intergenic not near genes chr2L 22518856 intergenic not near genes chr2L 22522630 intergenic not near genes chr2L_9_22515001 chr2L_22515001 CanS-SH 589 chr2L 22558328 22558363 chr2L 22558714 22558749 13 386 14.0 14.0 14.0 0.9 421 chr2L 22558328 intergenic not near genes chr2L 22558538 intergenic not near genes chr2L 22558749 intergenic not near genes chr2L_13_22555001 chr2L_22555001 CanS-SH 590 chr2L 22581909 22581935 chr2L 22583773 22583799 S-element 9 1864 20.5 8.0 14.2 0.6 1890 chr2L 22581909 intron CG17494 + chr2L 22582854 intron CG17494 + chr2L 22583799 intron CG17494 + chr2L_9_22580001 chr2L_22580001 CanS-SH 591 chr2L 22776359 22776395 chr2L 22778223 22778259 S-element 17 1864 15.0 10.5 12.8 1.2 1900 chr2L 22776359 intergenic not near genes chr2L 22777309 intergenic not near genes chr2L 22778259 intergenic not near genes chr2L_17_22775001 chr2L_22775001 CanS-SH 592 chr2L 23181337 23181348 chr2L 23181521 23181531 5 184 24.0 11.5 17.8 0.3 194 chr2L 23181337 intergenic not near genes chr2L 23181434 intergenic not near genes chr2L 23181531 intergenic not near genes chr2L_5_23180001 chr2L_23180001 CanS-SH 593 chr2R 1516542 1516585 chr2R 1521345 1521388 1731 36 4803 66.0 55.5 60.8 0.6 4846 chr2R 1516542 exon Maf1 - chr2R 1518965 intron Maf1 - chr2R 1521388 5` UTR Maf1 - chr2R_36_1515001 chr2R_1515001 CanS-SH 594 chr2R 1919636 1919664 chr2R 1920037 1920065 6 401 32.0 26.5 29.2 0.2 429 chr2R 1919636 intron CG17684 - chr2R 1919850 intron CG17684 - chr2R 1920065 intron CG17684 - chr2R_6_1915001 chr2R_1915001 CanS-SH 595 chr2R 2498926 2498962 chr2R 2508148 2508184 roo 17 9222 16.0 11.0 13.5 1.2 9258 chr2R 2498926 intron MFS17 - chr2R 2503555 intron MFS17 - chr2R 2508184 intron MFS17 - chr2R_17_2500001 chr2R_2500001 CanS-SH 596 chr2R 2590026 2590055 chr2R 2590862 2590891 copia 4 836 39.5 38.0 38.8 0.1 865 chr2R 2590026 intergenic not near genes chr2R 2590458 intergenic not near genes chr2R 2590891 intergenic not near genes chr2R_4_2590001 chr2R_2590001 CanS-SH 597 chr2R 2903666 2903700 chr2R 2903852 2903886 7 186 8.0 6.0 7.0 0.9 220 chr2R 2903666 intergenic not near genes chr2R 2903776 intergenic not near genes chr2R 2903886 intergenic not near genes chr2R_7_2900001 chr2R_2900001 CanS-SH 598 chr2R 3144039 3144104 chr2R 3393392 3393457 Doc 10 249353 28.5 23.5 26.0 0.4 249418 chr2R 3144039 intron CG42596 + chr2R 3268748 intergenic not near genes chr2R 3393457 intergenic not near genes chr2R_10_3265001 chr2R_3265001 CanS-SH 599 chr2R 3290441 3290445 chr2R 3290609 3290613 4 168 17.5 20.0 18.8 0.2 172 chr2R 3290441 intergenic not near genes chr2R 3290527 intergenic not near genes chr2R 3290613 intergenic not near genes chr2R_4_3290001 chr2R_3290001 CanS-SH 600 chr2R 3291379 3291386 chr2R 3291790 3291797 4 411 18.5 21.0 19.8 0.2 418 chr2R 3291379 intergenic not near genes chr2R 3291588 intergenic not near genes chr2R 3291797 intergenic not near genes chr2R_4_3290001 chr2R_3290001 CanS-SH 601 chr2R 3532571 3532583 chr2R 3536089 3536101 Doc 8 3518 12.0 6.5 9.2 0.8 3530 chr2R 3532571 intergenic not near genes chr2R 3534336 intergenic not near genes chr2R 3536101 intergenic not near genes chr2R_8_3530001 chr2R_3530001 CanS-SH 602 chr2R 1365714 1365717 chr2R 3915285 3915288 297 4 2549571 27.0 31.0 29.0 0.1 2549574 chr2R 1365714 intron l(2)41Ab + chr2R 2640501 intergenic not near genes chr2R 3915288 intron uex - chr2R_4_2640001 chr2R_2640001 CanS-SH 603 chr2R 4580517 4580561 chr2R 4580798 4580842 12 281 15.5 7.5 11.5 1.0 325 chr2R 4580517 intergenic not near genes chr2R 4580680 intergenic not near genes chr2R 4580842 intergenic not near genes chr2R_12_4580001 chr2R_4580001 CanS-SH 604 chr2R 4694076 4694139 chr2R 4694240 4694303 8 164 8.5 5.5 7.0 1.0 227 chr2R 4694076 intron Nipped-B - chr2R 4694190 intron Nipped-B - chr2R 4694303 intron Nipped-B - chr2R_8_4690001 chr2R_4690001 CanS-SH 605 chr2R 4900465 4900510 chr2R 4900645 4900689 12 179 10.0 5.0 7.5 1.4 224 chr2R 4900465 intron CG44102 - chr2R 4900577 intron CG44102 - chr2R 4900689 intron CG44102 - chr2R_12_4900001 chr2R_4900001 CanS-SH 606 chr2R 4916053 4916121 chr2R 4916212 4916280 15 159 9.5 9.0 9.2 1.5 227 chr2R 4916053 intergenic not near genes chr2R 4916166 intergenic not near genes chr2R 4916280 intergenic not near genes chr2R_15_4915001 chr2R_4915001 CanS-SH 607 chr2R 5019219 5019290 chr2R 5019379 5019451 24 161 10.0 9.5 9.8 2.2 232 chr2R 5019219 intron Ir41a + chr2R 5019335 intron Ir41a + chr2R 5019451 intron Ir41a + chr2R_24_5015001 chr2R_5015001 CanS-SH 608 chr2R 5040753 5040764 chr2R 5041318 5041329 8 565 0.0 15.5 7.8 0.9 576 chr2R 5040753 intergenic not near genes chr2R 5041041 intergenic not near genes chr2R 5041329 intergenic not near genes chr2R_8_5040001 chr2R_5040001 CanS-SH 609 chr2R 5075159 5075171 chr2R 5075362 5075374 9 203 17.5 0.0 8.8 0.9 215 chr2R 5075159 intergenic not near genes chr2R 5075266 intergenic not near genes chr2R 5075374 intergenic not near genes chr2R_9_5075001 chr2R_5075001 CanS-SH 610 chr2R 5075192 5075222 chr2R 5075758 5075788 G5 13 566 11.0 6.0 8.5 1.4 596 chr2R 5075192 intergenic not near genes chr2R 5075490 intergenic not near genes chr2R 5075788 intergenic not near genes chr2R_13_5075001 chr2R_5075001 CanS-SH 611 chr2R 5080753 5080798 chr2R 5080914 5080964 13 161 8.5 16.5 12.5 1.0 211 chr2R 5080753 intergenic not near genes chr2R 5080858 intergenic not near genes chr2R 5080964 intergenic not near genes chr2R_13_5080001 chr2R_5080001 CanS-SH 612 chr2R 5127749 5127768 chr2R 5127920 5127939 INE-1 9 171 9.0 16.5 12.8 0.7 190 chr2R 5127749 intron,intron gus -,CR43256 + chr2R 5127844 intron,intron gus -,CR43256 + chr2R 5127939 intron,intron gus -,CR43256 + chr2R_9_5125001 chr2R_5125001 CanS-SH 613 chr2R 5179893 5179933 chr2R 5180101 5180141 10 208 21.5 11.5 16.5 0.6 248 chr2R 5179893 intron Nipped-A - chr2R 5180017 intron Nipped-A - chr2R 5180141 intron Nipped-A - chr2R_10_5180001 chr2R_5180001 CanS-SH 614 chr2R 5192822 5192903 chr2R 5192995 5193076 20 173 7.5 6.0 6.8 2.6 254 chr2R 5192822 intron Nipped-A - chr2R 5192949 intron Nipped-A - chr2R 5193076 intron Nipped-A - chr2R_20_5190001 chr2R_5190001 CanS-SH 615 chr2R 5237273 5237315 chr2R 5237430 5237472 13 157 14.5 0.0 7.2 1.6 199 chr2R 5237273 intron Nipped-A - chr2R 5237372 intron Nipped-A - chr2R 5237472 intron Nipped-A - chr2R_13_5235001 chr2R_5235001 CanS-SH 616 chr2R 5299543 5299560 chr2R 5299996 5300013 INE-1 9 453 60.5 46.5 53.5 0.2 470 chr2R 5299543 intergenic not near genes chr2R 5299778 intergenic not near genes chr2R 5300013 intergenic not near genes chr2R_9_5295001 chr2R_5295001 CanS-SH 617 chr2R 5342760 5342833 chr2R 5342932 5343005 25 172 13.0 11.0 12.0 1.9 245 chr2R 5342760 intergenic not near genes chr2R 5342882 intergenic not near genes chr2R 5343005 intergenic not near genes chr2R_25_5340001 chr2R_5340001 CanS-SH 618 chr2R 5417935 5417963 chr2R 5420642 5420670 Burdock 12 2707 13.5 11.5 12.5 0.9 2735 chr2R 5417935 intron laccase2 + chr2R 5419302 intron laccase2 + chr2R 5420670 intron laccase2 + chr2R_12_5415001 chr2R_5415001 CanS-SH 619 chr2R 5472376 5472448 chr2R 5472872 5472945 10 496 4.5 10.0 7.2 1.2 569 chr2R 5472376 intron CG30440 - chr2R 5472660 intron CG30440 - chr2R 5472945 intron CG30440 - chr2R_10_5470001 chr2R_5470001 CanS-SH 620 chr2R 5473312 5473372 chr2R 5473482 5473542 18 170 7.0 11.5 9.2 1.8 230 chr2R 5473312 intron CG30440 - chr2R 5473427 intron CG30440 - chr2R 5473542 intron CG30440 - chr2R_18_5470001 chr2R_5470001 CanS-SH 621 chr2R 5475380 5475473 chr2R 5475719 5475812 17 339 4.0 7.5 5.8 2.5 432 chr2R 5475380 intron CG30440 - chr2R 5475596 intron CG30440 - chr2R 5475812 intron CG30440 - chr2R_17_5475001 chr2R_5475001 CanS-SH 622 chr2R 5476283 5476326 chr2R 5476902 5476945 14 619 10.5 5.0 7.8 1.6 662 chr2R 5476283 intron CG30440 - chr2R 5476614 intron CG30440 - chr2R 5476945 intron CG30440 - chr2R_14_5475001 chr2R_5475001 CanS-SH 623 chr2R 5491654 5491685 chr2R 5491870 5491901 13 216 16.0 13.0 14.5 0.8 247 chr2R 5491654 intron CG30440 - chr2R 5491778 intron CG30440 - chr2R 5491901 intron CG30440 - chr2R_13_5490001 chr2R_5490001 CanS-SH 624 chr2R 5509504 5509541 chr2R 5509675 5509712 8 171 11.5 17.0 14.2 0.5 208 chr2R 5509504 intron CG30438 + chr2R 5509608 intron CG30438 + chr2R 5509712 intron CG30438 + chr2R_8_5505001 chr2R_5505001 CanS-SH 625 chr2R 5581562 5581595 chr2R 5627619 5627652 6 46057 21.0 14.5 17.8 0.3 46090 chr2R 5581562 intergenic not near genes chr2R 5604607 exon Fis1 - chr2R 5627652 intergenic not near genes chr2R_6_5600001 chr2R_5600001 CanS-SH 626 chr2R 5724938 5725011 chr2R 5725243 5725316 17 305 8.5 10.0 9.2 1.7 378 chr2R 5724938 intron ap - chr2R 5725127 intron ap - chr2R 5725316 intron ap - chr2R_17_5725001 chr2R_5725001 CanS-SH 627 chr2R 5750390 5750453 chr2R 5750557 5750619 27 167 12.5 14.5 13.5 1.9 229 chr2R 5750390 intergenic not near genes chr2R 5750504 intergenic not near genes chr2R 5750619 intergenic not near genes chr2R_27_5750001 chr2R_5750001 CanS-SH 628 chr2R 5772453 5772549 chr2R 5772622 5772718 31 169 5.5 5.5 5.5 4.8 265 chr2R 5772453 3` UTR Gp210 + chr2R 5772586 3` UTR Gp210 + chr2R 5772718 3` UTR Gp210 + chr2R_31_5770001 chr2R_5770001 CanS-SH 629 chr2R 5772769 5772850 chr2R 5772926 5773007 36 157 5.0 12.5 8.8 3.7 238 chr2R 5772769 3` UTR Gp210 + chr2R 5772888 3` UTR Gp210 + chr2R 5773007 3` UTR Gp210 + chr2R_36_5770001 chr2R_5770001 CanS-SH 630 chr2R 5790403 5790477 chr2R 5790563 5790637 21 160 10.5 8.0 9.2 2.1 234 chr2R 5790403 intergenic not near genes chr2R 5790520 intergenic not near genes chr2R 5790637 intergenic not near genes chr2R_21_5790001 chr2R_5790001 CanS-SH 631 chr2R 5861227 5861262 chr2R 5861423 5861458 12 196 13.0 4.0 8.5 1.3 231 chr2R 5861227 intergenic dpr12 + chr2R 5861342 intergenic not near genes chr2R 5861458 intergenic not near genes chr2R_12_5860001 chr2R_5860001 CanS-SH 632 chr2R 5869206 5869243 chr2R 5874365 5874402 flea 14 5159 18.5 8.0 13.2 1.0 5196 chr2R 5869206 intergenic not near genes chr2R 5871804 intergenic not near genes chr2R 5874402 intergenic not near genes chr2R_14_5870001 chr2R_5870001 CanS-SH 633 chr2R 5878869 5878944 chr2R 5879024 5879099 19 155 7.0 7.5 7.2 2.3 230 chr2R 5878869 intergenic CG44438 - chr2R 5878984 intergenic CG44438 - chr2R 5879099 intergenic CG44438 - chr2R_19_5875001 chr2R_5875001 CanS-SH 634 chr2R 5885292 5885374 chr2R 5885496 5885578 17 204 7.5 6.0 6.8 2.2 286 chr2R 5885292 5` UTR CR44125 + chr2R 5885435 5` UTR CR44125 + chr2R 5885578 5` UTR CR44125 + chr2R_17_5885001 chr2R_5885001 CanS-SH 635 chr2R 6096658 6096694 chr2R 6101931 6101967 BS 11 5273 15.5 5.5 10.5 1.0 5309 chr2R 6096658 intron EcR - chr2R 6099312 intron EcR - chr2R 6101967 intron EcR - chr2R_11_6095001 chr2R_6095001 CanS-SH 636 chr2R 6494470 6494505 chr2R 6499307 6499342 F-element 7 4837 16.5 12.5 14.5 0.5 4872 chr2R 6494470 intergenic not near genes chr2R 6496906 intergenic not near genes chr2R 6499342 intergenic not near genes chr2R_7_6495001 chr2R_6495001 CanS-SH 637 chr2R 6538313 6538401 chr2R 6538466 6538554 30 153 6.0 10.0 8.0 3.3 241 chr2R 6538313 intron jing + chr2R 6538434 intron jing + chr2R 6538554 intron jing + chr2R_30_6535001 chr2R_6535001 CanS-SH 638 chr2R 6539773 6539850 chr2R 6539963 6540040 20 190 6.0 10.5 8.2 2.2 267 chr2R 6539773 intron jing + chr2R 6539906 intron jing + chr2R 6540040 intron jing + chr2R_20_6535001 chr2R_6535001 CanS-SH 639 chr2R 6579733 6579742 chr2R 6584894 6584903 flea 5 5161 17.0 9.0 13.0 0.4 5170 chr2R 6579733 intron jing + chr2R 6582318 intron jing + chr2R 6584903 intron jing + chr2R_5_6580001 chr2R_6580001 CanS-SH 640 chr2R 6594002 6594057 chr2R 6594177 6594268 14 188 0.5 5.5 3.0 3.5 266 chr2R 6594002 intron jing + chr2R 6594135 intron jing + chr2R 6594268 intron jing + chr2R_14_6590001 chr2R_6590001 CanS-SH 641 chr2R 6597810 6597889 chr2R 6597973 6598052 28 163 5.5 11.5 8.5 2.9 242 chr2R 6597810 intron jing + chr2R 6597931 intron jing + chr2R 6598052 intron jing + chr2R_28_6595001 chr2R_6595001 CanS-SH 642 chr2R 6607861 6607945 chr2R 6608038 6608122 19 177 12.5 6.5 9.5 1.8 261 chr2R 6607861 intron jing + chr2R 6607992 intron jing + chr2R 6608122 intron jing + chr2R_19_6605001 chr2R_6605001 CanS-SH 643 chr2R 6685820 6685867 chr2R 6685977 6686024 17 157 12.5 13.0 12.8 1.2 204 chr2R 6685820 intron,intron CG9422 +,Tdc2 - chr2R 6685922 intron,intron CG9422 +,Tdc2 - chr2R 6686024 intron,intron CG9422 +,Tdc2 - chr2R_17_6685001 chr2R_6685001 CanS-SH 644 chr2R 6846247 6846276 chr2R 6846399 6846428 15 152 13.5 15.5 14.5 1.0 181 chr2R 6846247 intergenic not near genes chr2R 6846338 intergenic not near genes chr2R 6846428 intergenic not near genes chr2R_15_6845001 chr2R_6845001 CanS-SH 645 chr2R 6952113 6952134 chr2R 6959769 6959790 opus 6 7656 11.0 12.0 11.5 0.5 7677 chr2R 6952113 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955952 intron,intron mim -,CheB42c - chr2R 6959790 intron,intron mim -,CheB42c - chr2R_6_6955001 chr2R_6955001 CanS-SH 646 chr2R 6964219 6964290 chr2R 6964371 6964442 25 152 10.0 9.0 9.5 2.4 223 chr2R 6964219 intron,intron mim -,CheB42c - chr2R 6964330 intron,intron mim -,CheB42c - chr2R 6964442 intron,intron mim -,CheB42c - chr2R_25_6960001 chr2R_6960001 CanS-SH 647 chr2R 7076326 7076404 chr2R 7076486 7076564 28 160 6.0 10.0 8.0 3.1 238 chr2R 7076326 intergenic not near genes chr2R 7076445 intergenic not near genes chr2R 7076564 intergenic not near genes chr2R_28_7075001 chr2R_7075001 CanS-SH 648 chr2R 7091145 7091229 chr2R 7091302 7091386 29 157 9.0 12.0 10.5 2.5 241 chr2R 7091145 intron esn + chr2R 7091266 intron esn + chr2R 7091386 intron esn + chr2R_29_7090001 chr2R_7090001 CanS-SH 649 chr2R 7139821 7139853 chr2R 7141412 7141444 hopper2 13 1591 10.5 3.5 7.0 1.6 1623 chr2R 7139821 intergenic not near genes chr2R 7140632 intergenic not near genes chr2R 7141444 intergenic not near genes chr2R_13_7140001 chr2R_7140001 CanS-SH 650 chr2R 7164196 7164235 chr2R 7164462 7164500 12 266 15.0 7.0 11.0 1.0 304 chr2R 7164196 intron pk + chr2R 7164348 intron pk + chr2R 7164500 intron pk + chr2R_12_7160001 chr2R_7160001 CanS-SH 651 chr2R 7196509 7196539 chr2R 7201359 7201389 F-element 14 4850 13.0 12.0 12.5 1.0 4880 chr2R 7196509 intron pk + chr2R 7198949 intron pk + chr2R 7201389 intron pk + chr2R_14_7195001 chr2R_7195001 CanS-SH 652 chr2R 7235764 7235790 chr2R 7240931 7240957 jockey 9 5167 20.5 4.5 12.5 0.7 5193 chr2R 7235764 intergenic not near genes chr2R 7238360 intergenic not near genes chr2R 7240957 intergenic not near genes chr2R_9_7235001 chr2R_7235001 CanS-SH 653 chr2R 7434835 7434865 chr2R 7439211 7439241 Juan 14 4376 16.5 9.5 13.0 1.0 4406 chr2R 7434835 3` UTR so + chr2R 7437038 intergenic not near genes chr2R 7439241 intergenic not near genes chr2R_14_7435001 chr2R_7435001 CanS-SH 654 chr2R 7459214 7459228 chr2R 7459377 7459391 5 163 20.5 8.0 14.2 0.3 177 chr2R 7459214 intergenic Inos -,CG11141 - chr2R 7459302 intergenic CG11141 -,Inos - chr2R 7459391 intergenic CG11141 - chr2R_5_7455001 chr2R_7455001 CanS-SH 655 chr2R 7478514 7478610 chr2R 7478674 7478769 16 160 5.5 3.5 4.5 2.9 255 chr2R 7478514 intergenic wech - chr2R 7478642 intergenic wech - chr2R 7478769 intergenic wech - chr2R_16_7475001 chr2R_7475001 CanS-SH 656 chr2R 7608348 7608443 chr2R 7613626 7613698 I-element 18 5272 7.0 0.0 3.5 4.0 5350 chr2R 7608348 intron CG1358 - chr2R 7611023 intron CG1358 - chr2R 7613698 intron CG1358 - chr2R_18_7610001 chr2R_7610001 CanS-SH 657 chr2R 7642794 7642876 chr2R 7642949 7643031 22 155 8.5 6.0 7.2 2.7 237 chr2R 7642794 intron CG43340 + chr2R 7642912 intron CG43340 + chr2R 7643031 intron CG43340 + chr2R_22_7640001 chr2R_7640001 CanS-SH 658 chr2R 7692014 7692036 chr2R 7692170 7692192 7 156 0.5 16.5 8.5 0.7 178 chr2R 7692014 intron CG1399 - chr2R 7692103 intron CG1399 - chr2R 7692192 intron CG1399 - chr2R_7_7690001 chr2R_7690001 CanS-SH 659 chr2R 7694517 7694595 chr2R 7694676 7694754 15 159 9.0 11.0 10.0 1.4 237 chr2R 7694517 intron CG1399 - chr2R 7694636 intron CG1399 - chr2R 7694754 intron CG1399 - chr2R_15_7690001 chr2R_7690001 CanS-SH 660 chr2R 7714066 7714108 chr2R 7714224 7714266 18 158 8.5 18.0 13.2 1.3 200 chr2R 7714066 exon CG1942 + chr2R 7714166 3` UTR CG1942 + chr2R 7714266 intergenic CG1942 + chr2R_18_7710001 chr2R_7710001 CanS-SH 661 chr2R 7760209 7760252 chr2R 7760421 7760464 13 212 19.0 9.0 14.0 0.9 255 chr2R 7760209 intron,intron CG30497 -,CG45093 - chr2R 7760336 intron,intron CG30497 -,CG45093 - chr2R 7760464 intron,intron CG30497 -,CG45093 - chr2R_13_7760001 chr2R_7760001 CanS-SH 662 chr2R 7769676 7769692 chr2R 7769828 7769844 8 152 13.0 8.0 10.5 0.7 168 chr2R 7769676 intron,intron CG30497 -,CG45093 - chr2R 7769760 intron,intron CG30497 -,CG45093 - chr2R 7769844 intron,intron CG30497 -,CG45093 - chr2R_8_7765001 chr2R_7765001 CanS-SH 663 chr2R 7815608 7815650 chr2R 7822152 7822194 Burdock 13 6544 13.0 7.5 10.2 1.2 6586 chr2R 7815608 intergenic CG1882 + chr2R 7818901 intergenic not near genes chr2R 7822194 3` UTR cathD - chr2R_13_7815001 chr2R_7815001 CanS-SH 664 chr2R 7862201 7862240 chr2R 7867360 7867399 flea 16 5159 13.5 15.0 14.2 1.1 5198 chr2R 7862201 intron Dgk - chr2R 7864800 intron Dgk - chr2R 7867399 intron Dgk - chr2R_16_7860001 chr2R_7860001 CanS-SH 665 chr2R 7869127 7869161 chr2R 7873988 7874022 Doc 12 4861 18.0 8.5 13.2 0.8 4895 chr2R 7869127 intron Dgk - chr2R 7871574 intron Dgk - chr2R 7874022 intron Dgk - chr2R_12_7870001 chr2R_7870001 CanS-SH 666 chr2R 7936771 7936851 chr2R 7936929 7937009 31 158 14.5 6.5 10.5 2.7 238 chr2R 7936771 3` UTR drosha + chr2R 7936890 3` UTR CG8728 - chr2R 7937009 exon CG8728 - chr2R_31_7935001 chr2R_7935001 CanS-SH 667 chr2R 7942864 7942953 chr2R 7943196 7943285 19 332 8.5 6.0 7.2 2.3 421 chr2R 7942864 exon CG14764 - chr2R 7943074 intron CG14764 - chr2R 7943285 intron CG14764 - chr2R_19_7940001 chr2R_7940001 CanS-SH 668 chr2R 8015589 8015616 chr2R 8017687 8017714 8 2098 10.5 0.0 5.2 1.3 2125 chr2R 8015589 intergenic mir-4981 + chr2R 8016652 intergenic not near genes chr2R 8017714 intergenic not near genes chr2R_8_8015001 chr2R_8015001 CanS-SH 669 chr2R 8157825 8157906 chr2R 8157988 8158069 12 163 8.0 7.5 7.8 1.4 244 chr2R 8157825 5` UTR CR44068 + chr2R 8157947 5` UTR CR44068 + chr2R 8158069 5` UTR CR44068 + chr2R_12_8155001 chr2R_8155001 CanS-SH 670 chr2R 8188647 8188663 chr2R 8188856 8188872 6 209 20.5 8.0 14.2 0.4 225 chr2R 8188647 intron LRP1 + chr2R 8188760 intron LRP1 + chr2R 8188872 intron LRP1 + chr2R_6_8185001 chr2R_8185001 CanS-SH 671 chr2R 8235968 8236005 chr2R 8236124 8236160 8 155 2.5 10.5 6.5 1.1 192 chr2R 8235968 intergenic not near genes chr2R 8236064 intergenic not near genes chr2R 8236160 intergenic not near genes chr2R_8_8235001 chr2R_8235001 CanS-SH 672 chr2R 3262649 3262652 chr2R 8286274 8286277 4 5023625 4.5 19.5 12.0 0.3 5023628 chr2R 3262649 intergenic not near genes chr2R 5774463 intergenic Gp210 +,ZnT41F - chr2R 8286277 intergenic not near genes chr2R_4_5770001 chr2R_5770001 CanS-SH 673 chr2R 8330799 8330830 chr2R 8331360 8331391 roo 14 561 15.5 9.0 12.2 1.1 592 chr2R 8330799 intron pdm3 + chr2R 8331095 intron pdm3 + chr2R 8331391 intron pdm3 + chr2R_14_8330001 chr2R_8330001 CanS-SH 674 chr2R 8341515 8341590 chr2R 8341683 8341758 13 168 7.0 6.5 6.8 1.7 243 chr2R 8341515 intron pdm3 + chr2R 8341636 intron pdm3 + chr2R 8341758 intron pdm3 + chr2R_13_8340001 chr2R_8340001 CanS-SH 675 chr2R 8379720 8379811 chr2R 8379891 8379982 32 171 7.5 7.0 7.2 3.9 262 chr2R 8379720 intron pdm3 + chr2R 8379851 intron pdm3 + chr2R 8379982 intron pdm3 + chr2R_32_8375001 chr2R_8375001 CanS-SH 676 chr2R 8398150 8398185 chr2R 8403006 8403041 Doc 15 4856 19.5 12.0 15.8 0.9 4891 chr2R 8398150 exon CG2121 - chr2R 8400596 intron CG2121 - chr2R 8403041 intron CG2121 - chr2R_15_8400001 chr2R_8400001 CanS-SH 677 chr2R 8416243 8416322 chr2R 8417142 8417221 I-element 8 899 7.5 8.5 8.0 0.9 978 chr2R 8416243 intergenic not near genes chr2R 8416732 intergenic CG43296 - chr2R 8417221 3` UTR CG43296 - chr2R_8_8415001 chr2R_8415001 CanS-SH 678 chr2R 8489942 8489965 chr2R 8490102 8490126 11 161 0.0 9.5 4.8 1.9 184 chr2R 8489942 intron mtt - chr2R 8490034 intron mtt - chr2R 8490126 intron mtt - chr2R_11_8490001 chr2R_8490001 CanS-SH 679 chr2R 8515688 8515768 chr2R 8515846 8515926 29 158 10.5 10.5 10.5 2.5 238 chr2R 8515688 intron mtt - chr2R 8515807 intron mtt - chr2R 8515926 intron mtt - chr2R_29_8515001 chr2R_8515001 CanS-SH 680 chr2R 8524893 8524921 chr2R 8525107 8525135 14 214 11.5 7.5 9.5 1.3 242 chr2R 8524893 intron mtt - chr2R 8525014 intron mtt - chr2R 8525135 intron mtt - chr2R_14_8525001 chr2R_8525001 CanS-SH 681 chr2R 8529272 8529360 chr2R 8531634 8531723 11 2362 54.5 44.5 49.5 0.2 2451 chr2R 8529272 intron mtt - chr2R 8530498 intron mtt - chr2R 8531723 intron mtt - chr2R_11_8530001 chr2R_8530001 CanS-SH 682 chr2R 8565307 8565404 chr2R 8565461 8565558 21 154 9.0 3.5 6.2 2.9 251 chr2R 8565307 exon Cyp6a14 - chr2R 8565432 exon Cyp6a14 - chr2R 8565558 exon Cyp6a14 - chr2R_21_8565001 chr2R_8565001 CanS-SH 683 chr2R 8565991 8566022 chr2R 8567012 8567043 1360 13 1021 13.0 16.0 14.5 0.8 1052 chr2R 8565991 5` UTR Cyp6a14 - chr2R 8566517 5` UTR Cyp6a14 - chr2R 8567043 5` UTR Cyp6a14 - chr2R_13_8565001 chr2R_8565001 CanS-SH 684 chr2R 8722703 8722740 chr2R 8723019 8723056 pogo 10 316 14.0 4.5 9.2 1.0 353 chr2R 8722703 intron CG14767 - chr2R 8722880 intron CG14767 - chr2R 8723056 intron CG14767 - chr2R_10_8720001 chr2R_8720001 CanS-SH 685 chr2R 8777851 8777944 chr2R 8784130 8784223 diver 17 6279 7.5 10.5 9.0 1.7 6372 chr2R 8777851 intergenic not near genes chr2R 8781037 intergenic not near genes chr2R 8784223 intergenic not near genes chr2R_17_8780001 chr2R_8780001 CanS-SH 686 chr2R 8799001 8799048 chr2R 8799162 8799209 15 161 9.0 12.0 10.5 1.3 208 chr2R 8799001 5` UTR sns + chr2R 8799105 exon sns + chr2R 8799209 exon sns + chr2R_15_8795001 chr2R_8795001 CanS-SH 687 chr2R 8810670 8810742 chr2R 8810831 8810903 24 161 6.0 7.5 6.8 3.1 233 chr2R 8810670 intron sns + chr2R 8810786 intron sns + chr2R 8810903 intron sns + chr2R_24_8810001 chr2R_8810001 CanS-SH 688 chr2R 9047346 9047437 chr2R 9047516 9047607 26 170 8.5 7.5 8.0 2.9 261 chr2R 9047346 intron CG13743 - chr2R 9047476 intron CG13743 - chr2R 9047607 intron CG13743 - chr2R_26_9045001 chr2R_9045001 CanS-SH 689 chr2R 9052643 9052721 chr2R 9052797 9052877 20 155 6.0 10.0 8.0 2.2 234 chr2R 9052643 intron CG13743 - chr2R 9052760 intron CG13743 - chr2R 9052877 intron CG13743 - chr2R_20_9050001 chr2R_9050001 CanS-SH 690 chr2R 9078424 9078498 chr2R 9078577 9078651 27 153 11.0 7.5 9.2 2.6 227 chr2R 9078424 intergenic CG8083 + chr2R 9078538 intergenic CG8083 + chr2R 9078651 intergenic CG8083 + chr2R_27_9075001 chr2R_9075001 CanS-SH 691 chr2R 9212642 9212668 chr2R 9213203 9213229 roo 11 561 18.0 0.0 9.0 1.1 587 chr2R 9212642 intergenic CR45309 + chr2R 9212936 intergenic CR45309 + chr2R 9213229 5` UTR CR45309 + chr2R_11_9210001 chr2R_9210001 CanS-SH 692 chr2R 9216171 9216270 chr2R 9216357 9216452 17 186 2.0 8.5 5.2 2.7 281 chr2R 9216171 intergenic not near genes chr2R 9216312 intergenic not near genes chr2R 9216452 intergenic not near genes chr2R_17_9215001 chr2R_9215001 CanS-SH 693 chr2R 9226189 9226252 chr2R 9226351 9226414 14 162 4.5 7.5 6.0 2.0 225 chr2R 9226189 intergenic not near genes chr2R 9226302 intergenic not near genes chr2R 9226414 intergenic not near genes chr2R_14_9225001 chr2R_9225001 CanS-SH 694 chr2R 9322655 9322698 chr2R 9322811 9322854 13 156 7.0 14.5 10.8 1.1 199 chr2R 9322655 intron,intron CG13739 -,CG13954 - chr2R 9322754 intron,intron CG13739 -,CG13954 - chr2R 9322854 intron,intron CG13739 -,CG13954 - chr2R_13_9320001 chr2R_9320001 CanS-SH 695 chr2R 9325453 9325491 chr2R 9325622 9325660 8 169 0.0 8.5 4.2 1.5 207 chr2R 9325453 intron,intron CG13739 -,CG13954 - chr2R 9325556 intron,intron CG13739 -,CG13954 - chr2R 9325660 intron,intron CG13739 -,CG13954 - chr2R_8_9325001 chr2R_9325001 CanS-SH 696 chr2R 9327109 9327157 chr2R 9327283 9327334 12 176 0.0 10.5 5.2 1.9 225 chr2R 9327109 intron,intron CG13739 -,CG13954 - chr2R 9327222 intron,intron CG13739 -,CG13954 - chr2R 9327334 intron,intron CG13739 -,CG13954 - chr2R_12_9325001 chr2R_9325001 CanS-SH 697 chr2R 9352165 9352172 chr2R 9361389 9361396 roo 5 9224 16.0 7.0 11.5 0.4 9231 chr2R 9352165 intron CG13954 - chr2R 9356780 intron CG13954 - chr2R 9361396 intron CG13954 - chr2R_5_9355001 chr2R_9355001 CanS-SH 698 chr2R 9390830 9390893 chr2R 9390991 9391054 20 161 14.5 7.0 10.8 1.7 224 chr2R 9390830 intron l(2)03659 + chr2R 9390942 intron l(2)03659 + chr2R 9391054 intron l(2)03659 + chr2R_20_9390001 chr2R_9390001 CanS-SH 699 chr2R 9480019 9480045 chr2R 9490625 9490651 roo 14 10606 17.0 13.5 15.2 0.9 10632 chr2R 9480019 intergenic not near genes chr2R 9485335 intergenic not near genes chr2R 9490651 intergenic not near genes chr2R_14_9485001 chr2R_9485001 CanS-SH 700 chr2R 9509365 9509432 chr2R 9509524 9509591 25 159 7.5 7.5 7.5 2.9 226 chr2R 9509365 intron brp + chr2R 9509478 intron brp + chr2R 9509591 intron brp + chr2R_25_9505001 chr2R_9505001 CanS-SH 701 chr2R 9510604 9510693 chr2R 9510795 9510884 9 191 5.5 6.0 5.8 1.3 280 chr2R 9510604 exon brp + chr2R 9510744 intron brp + chr2R 9510884 exon brp + chr2R_9_9510001 chr2R_9510001 CanS-SH 702 chr2R 9561756 9561804 chr2R 9561918 9561966 6 162 12.0 3.5 7.8 0.7 210 chr2R 9561756 3` UTR,exon CR45281 -,CG1809 + chr2R 9561861 3` UTR,intron CR45281 -,CG1809 + chr2R 9561966 3` UTR,intron CR45281 -,CG1809 + chr2R_6_9560001 chr2R_9560001 CanS-SH 703 chr2R 9566654 9566670 chr2R 9566812 9566828 4 158 9.5 5.5 7.5 0.5 174 chr2R 9566654 3` UTR Not1 - chr2R 9566741 3` UTR Not1 - chr2R 9566828 3` UTR Not1 - chr2R_4_9565001 chr2R_9565001 CanS-SH 704 chr2R 9590426 9590520 chr2R 9590643 9590737 10 217 4.5 3.5 4.0 2.0 311 chr2R 9590426 intron,3` UTR clos -,CG1827 + chr2R 9590582 intron clos - chr2R 9590737 intron clos - chr2R_10_9590001 chr2R_9590001 CanS-SH 705 chr2R 9656293 9656334 chr2R 9657053 9657094 16 760 44.0 18.0 31.0 0.5 801 chr2R 9656293 intron Mmp2 - chr2R 9656694 intron Mmp2 - chr2R 9657094 intron Mmp2 - chr2R_16_9655001 chr2R_9655001 CanS-SH 706 chr2R 9699344 9699424 chr2R 9699506 9699586 18 162 7.5 7.0 7.2 2.2 242 chr2R 9699344 intergenic not near genes chr2R 9699465 intergenic not near genes chr2R 9699586 intergenic not near genes chr2R_18_9695001 chr2R_9695001 CanS-SH 707 chr2R 9726556 9726592 chr2R 9734182 9734218 17.6 19 7626 16.5 11.0 13.8 1.3 7662 chr2R 9726556 intron sqa - chr2R 9730387 intron sqa - chr2R 9734218 intron sqa - chr2R_19_9730001 chr2R_9730001 CanS-SH 708 chr2R 9870982 9871020 chr2R 9871543 9871581 roo 17 561 19.0 13.0 16.0 1.0 599 chr2R 9870982 intron cbx - chr2R 9871282 intron cbx - chr2R 9871581 intron,5` UTR cbx -,CG18446 + chr2R_17_9870001 chr2R_9870001 CanS-SH 709 chr2R 9921129 9921142 chr2R 9921334 9921347 7 205 8.5 7.0 7.8 0.8 218 chr2R 9921129 intron Mef2 - chr2R 9921238 intron Mef2 - chr2R 9921347 intron Mef2 - chr2R_7_9920001 chr2R_9920001 CanS-SH 710 chr2R 9927098 9927151 chr2R 9927253 9927306 9 155 10.5 3.5 7.0 1.1 208 chr2R 9927098 intron Mef2 - chr2R 9927202 intron Mef2 - chr2R 9927306 intron Mef2 - chr2R_9_9925001 chr2R_9925001 CanS-SH 711 chr2R 9945377 9945417 chr2R 9945648 9945688 BS 7 271 14.5 8.5 11.5 0.6 311 chr2R 9945377 intron Mef2 - chr2R 9945532 intron Mef2 - chr2R 9945688 intron Mef2 - chr2R_7_9945001 chr2R_9945001 CanS-SH 712 chr2R 9998002 9998092 chr2R 9998171 9998261 13 169 7.0 5.5 6.2 1.8 259 chr2R 9998002 intron Pka-R2 - chr2R 9998132 intron Pka-R2 - chr2R 9998261 intron Pka-R2 - chr2R_13_9995001 chr2R_9995001 CanS-SH 713 chr2R 10005487 10005544 chr2R 10005659 10005716 13 172 11.0 6.5 8.8 1.3 229 chr2R 10005487 intron Pka-R2 - chr2R 10005602 intron Pka-R2 - chr2R 10005716 intron Pka-R2 - chr2R_13_10005001 chr2R_10005001 CanS-SH 714 chr2R 10005788 10005828 chr2R 10007028 10007068 1360 15 1240 12.0 11.0 11.5 1.2 1280 chr2R 10005788 intron Pka-R2 - chr2R 10006428 intron Pka-R2 - chr2R 10007068 intron Pka-R2 - chr2R_15_10005001 chr2R_10005001 CanS-SH 715 chr2R 10008553 10008574 chr2R 10008716 10008737 14 163 0.0 5.5 2.8 3.7 184 chr2R 10008553 intron Pka-R2 - chr2R 10008645 intron Pka-R2 - chr2R 10008737 intron Pka-R2 - chr2R_14_10005001 chr2R_10005001 CanS-SH 716 chr2R 10047758 10048045 chr2R 10047916 10048215 50 164 10.5 12.0 11.2 4.1 457 chr2R 10047758 intron oys - chr2R 10047986 intron oys - chr2R 10048215 intron oys - chr2R_50_10045001 chr2R_10045001 CanS-SH 717 chr2R 10048046 10048066 chr2R 10048216 10048236 5 170 6.5 19.5 13.0 0.4 190 chr2R 10048046 intron oys - chr2R 10048141 intron oys - chr2R 10048236 intron oys - chr2R_5_10045001 chr2R_10045001 CanS-SH 718 chr2R 10053452 10053540 chr2R 10053630 10053718 17 178 4.0 9.0 6.5 2.3 266 chr2R 10053452 intron magu + chr2R 10053585 intron magu + chr2R 10053718 intron magu + chr2R_17_10050001 chr2R_10050001 CanS-SH 719 chr2R 10086852 10086933 chr2R 10087024 10087105 20 172 7.5 6.5 7.0 2.5 253 chr2R 10086852 intron,exon CG2269 +,sut4 - chr2R 10086978 intron,5` UTR CG2269 +,sut4 - chr2R 10087105 intron,5` UTR CG2269 +,sut4 - chr2R_20_10085001 chr2R_10085001 CanS-SH 720 chr2R 10107112 10107204 chr2R 10107276 10107366 24 162 6.0 8.5 7.2 2.9 254 chr2R 10107112 intron 14-3-3zeta + chr2R 10107239 intron 14-3-3zeta + chr2R 10107366 intron 14-3-3zeta + chr2R_24_10105001 chr2R_10105001 CanS-SH 721 chr2R 10122667 10122748 chr2R 10122952 10123033 23 285 8.0 8.0 8.0 2.6 366 chr2R 10122667 intergenic Ccs - chr2R 10122850 intergenic Ccs - chr2R 10123033 intergenic Ccs - chr2R_23_10120001 chr2R_10120001 CanS-SH 722 chr2R 10132114 10132133 chr2R 10132269 10132288 9 155 21.0 11.0 16.0 0.5 174 chr2R 10132114 exon gem + chr2R 10132201 intron gem + chr2R 10132288 intron gem + chr2R_9_10130001 chr2R_10130001 CanS-SH 723 chr2R 10132137 10132183 chr2R 10132292 10132338 12 155 13.0 10.5 11.8 0.9 201 chr2R 10132137 exon gem + chr2R 10132238 intron gem + chr2R 10132338 exon gem + chr2R_12_10130001 chr2R_10130001 CanS-SH 724 chr2R 10171074 10171115 chr2R 10171233 10171274 13 159 0.0 20.0 10.0 1.2 200 chr2R 10171074 intron KCNQ - chr2R 10171174 intron KCNQ - chr2R 10171274 intron KCNQ - chr2R_13_10170001 chr2R_10170001 CanS-SH 725 chr2R 10176818 10176860 chr2R 10186060 10186102 roo 14 9242 9.5 5.0 7.2 1.7 9284 chr2R 10176818 intron KCNQ - chr2R 10181460 intron KCNQ - chr2R 10186102 intron KCNQ - chr2R_14_10180001 chr2R_10180001 CanS-SH 726 chr2R 10189219 10189222 chr2R 10189372 10189375 4 153 8.0 25.0 16.5 0.2 156 chr2R 10189219 intron KCNQ - chr2R 10189297 intron KCNQ - chr2R 10189375 intron KCNQ - chr2R_4_10185001 chr2R_10185001 CanS-SH 727 chr2R 10203573 10203660 chr2R 10203733 10203820 16 160 7.0 5.0 6.0 2.3 247 chr2R 10203573 intergenic not near genes chr2R 10203696 intergenic not near genes chr2R 10203820 intergenic not near genes chr2R_16_10200001 chr2R_10200001 CanS-SH 728 chr2R 10216118 10216165 chr2R 10216271 10216318 15 153 9.5 3.5 6.5 2.0 200 chr2R 10216118 intron,intron CG12912 -,Hr46 - chr2R 10216218 intron,intron CG12912 -,Hr46 - chr2R 10216318 intron,intron CG12912 -,Hr46 - chr2R_15_10215001 chr2R_10215001 CanS-SH 729 chr2R 10222119 10222152 chr2R 10222272 10222305 7 153 7.5 10.0 8.8 0.7 186 chr2R 10222119 intron,intron CG12912 -,Hr46 - chr2R 10222212 intron,intron CG12912 -,Hr46 - chr2R 10222305 intron,intron CG12912 -,Hr46 - chr2R_7_10220001 chr2R_10220001 CanS-SH 730 chr2R 10225657 10225750 chr2R 10225814 10225907 16 157 4.0 4.0 4.0 3.2 250 chr2R 10225657 intron,intron CG12912 -,Hr46 - chr2R 10225782 intron,intron CG12912 -,Hr46 - chr2R 10225907 intron,intron CG12912 -,Hr46 - chr2R_16_10225001 chr2R_10225001 CanS-SH 731 chr2R 10257092 10257189 chr2R 10257258 10257355 35 166 6.0 0.0 3.0 8.8 263 chr2R 10257092 intron CG12911 + chr2R 10257224 intron CG12911 + chr2R 10257355 intron CG12911 + chr2R_35_10255001 chr2R_10255001 CanS-SH 732 chr2R 10266440 10266497 chr2R 10266606 10266663 15 166 9.0 5.0 7.0 1.9 223 chr2R 10266440 intron CG12910 + chr2R 10266552 intron CG12910 + chr2R 10266663 intron CG12910 + chr2R_15_10265001 chr2R_10265001 CanS-SH 733 chr2R 10274746 10274828 chr2R 10274897 10274982 21 152 10.5 1.0 5.8 3.1 236 chr2R 10274746 intron CAP + chr2R 10274864 intron CAP + chr2R 10274982 intron CAP + chr2R_21_10270001 chr2R_10270001 CanS-SH 734 chr2R 10313254 10313321 chr2R 10313415 10313484 17 162 7.0 4.0 5.5 2.6 230 chr2R 10313254 intergenic not near genes chr2R 10313369 intergenic not near genes chr2R 10313484 intergenic Ndg + chr2R_17_10310001 chr2R_10310001 CanS-SH 735 chr2R 10318439 10318525 chr2R 10318605 10318686 21 164 9.5 7.5 8.5 2.2 247 chr2R 10318439 exon Ndg + chr2R 10318562 intron Ndg + chr2R 10318686 intron Ndg + chr2R_21_10315001 chr2R_10315001 CanS-SH 736 chr2R 10319654 10319735 chr2R 10319821 10319902 19 167 8.0 6.5 7.2 2.3 248 chr2R 10319654 exon Ndg + chr2R 10319778 intron Ndg + chr2R 10319902 exon,3` UTR Ndg +,CG34222 - chr2R_19_10315001 chr2R_10315001 CanS-SH 737 chr2R 10322003 10322080 chr2R 10322160 10322237 22 157 6.0 10.5 8.2 2.4 234 chr2R 10322003 3` UTR Ndg + chr2R 10322120 intergenic Ndg + chr2R 10322237 intergenic Ndg + chr2R_22_10320001 chr2R_10320001 CanS-SH 738 chr2R 10352636 10352665 chr2R 10352788 10352817 9 152 9.5 11.5 10.5 0.8 181 chr2R 10352636 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352726 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352817 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_9_10350001 chr2R_10350001 CanS-SH 739 chr2R 10387977 10387996 chr2R 10388149 10388168 4 172 0.0 17.0 8.5 0.4 191 chr2R 10387977 intron CG42732 - chr2R 10388072 intron CG42732 - chr2R 10388168 intron CG42732 - chr2R_4_10385001 chr2R_10385001 CanS-SH 740 chr2R 10409011 10409073 chr2R 10409163 10409224 20 152 0.0 13.5 6.8 2.6 213 chr2R 10409011 intron CG42732 - chr2R 10409118 intron CG42732 - chr2R 10409224 intron,exon CG42732 -,CG33477 - chr2R_20_10405001 chr2R_10405001 CanS-SH 741 chr2R 10460064 10460101 chr2R 10460263 10460300 13 199 7.0 7.0 7.0 1.6 236 chr2R 10460064 intron Galphao + chr2R 10460182 intron Galphao + chr2R 10460300 intron Galphao + chr2R_13_10460001 chr2R_10460001 CanS-SH 742 chr2R 10463475 10463503 chr2R 10465640 10465668 16 2165 64.0 9.5 36.8 0.4 2193 chr2R 10463475 intergenic not near genes chr2R 10464572 intergenic not near genes chr2R 10465668 intergenic Caf1-105 - chr2R_16_10460001 chr2R_10460001 CanS-SH 743 chr2R 10563844 10563860 chr2R 10564114 10564130 7 270 0.0 4.5 2.2 2.2 286 chr2R 10563844 intron psq + chr2R 10563987 intron psq + chr2R 10564130 intron psq + chr2R_7_10560001 chr2R_10560001 CanS-SH 744 chr2R 10574566 10574605 chr2R 10574723 10574762 10 157 14.5 13.5 14.0 0.7 196 chr2R 10574566 intron psq + chr2R 10574664 intron psq + chr2R 10574762 intron psq + chr2R_10_10570001 chr2R_10570001 CanS-SH 745 chr2R 10585498 10585579 chr2R 10594156 10594237 Tirant 5 8658 7.0 8.0 7.5 0.6 8739 chr2R 10585498 intron psq + chr2R 10589868 intron psq + chr2R 10594237 intron psq + chr2R_5_10585001 chr2R_10585001 CanS-SH 746 chr2R 10595720 10595785 chr2R 10595883 10595943 18 158 9.0 7.0 8.0 2.0 223 chr2R 10595720 intron psq + chr2R 10595832 intron psq + chr2R 10595943 intron psq + chr2R_18_10595001 chr2R_10595001 CanS-SH 747 chr2R 10614311 10614380 chr2R 10614468 10614537 6 157 0.0 10.5 5.2 1.0 226 chr2R 10614311 intron psq + chr2R 10614424 intron psq + chr2R 10614537 intron psq + chr2R_6_10610001 chr2R_10610001 CanS-SH 748 chr2R 10653144 10653222 chr2R 10653298 10653376 16 154 10.0 3.0 6.5 2.1 232 chr2R 10653144 intergenic not near genes chr2R 10653260 intergenic not near genes chr2R 10653376 intergenic not near genes chr2R_16_10650001 chr2R_10650001 CanS-SH 749 chr2R 10671219 10671246 chr2R 10671638 10671665 13 419 14.5 8.5 11.5 1.0 446 chr2R 10671219 intergenic not near genes chr2R 10671442 intergenic not near genes chr2R 10671665 intergenic not near genes chr2R_13_10670001 chr2R_10670001 CanS-SH 750 chr2R 10691040 10691127 chr2R 10691195 10691282 27 155 9.5 5.5 7.5 3.2 242 chr2R 10691040 intron stan + chr2R 10691161 intron stan + chr2R 10691282 intron stan + chr2R_27_10690001 chr2R_10690001 CanS-SH 751 chr2R 10790078 10790156 chr2R 10790241 10790319 25 163 10.0 10.0 10.0 2.3 241 chr2R 10790078 intron CG33144 - chr2R 10790198 intron CG33144 - chr2R 10790319 intron CG33144 - chr2R_25_10790001 chr2R_10790001 CanS-SH 752 chr2R 10856664 10856746 chr2R 10856823 10856904 16 159 9.0 1.0 5.0 2.7 240 chr2R 10856664 intron CG30015 - chr2R 10856784 intron CG30015 - chr2R 10856904 intron CG30015 - chr2R_16_10855001 chr2R_10855001 CanS-SH 753 chr2R 10901698 10901701 chr2R 10901851 10901854 4 153 0.0 15.5 7.8 0.5 156 chr2R 10901698 intergenic not near genes chr2R 10901776 intergenic not near genes chr2R 10901854 intergenic not near genes chr2R_4_10900001 chr2R_10900001 CanS-SH 754 chr2R 10959029 10959101 chr2R 10959183 10959255 25 154 2.0 8.0 5.0 4.2 226 chr2R 10959029 intergenic not near genes chr2R 10959142 intergenic not near genes chr2R 10959255 intergenic not near genes chr2R_25_10955001 chr2R_10955001 CanS-SH 755 chr2R 10970500 10970532 chr2R 10970814 10970846 8 314 13.0 8.0 10.5 0.7 346 chr2R 10970500 intergenic not near genes chr2R 10970673 intergenic not near genes chr2R 10970846 intergenic not near genes chr2R_8_10970001 chr2R_10970001 CanS-SH 756 chr2R 10976595 10976683 chr2R 10976973 10977069 16 379 7.0 0.0 3.5 3.6 474 chr2R 10976595 intergenic not near genes chr2R 10976832 intergenic not near genes chr2R 10977069 intergenic not near genes chr2R_16_10975001 chr2R_10975001 CanS-SH 757 chr2R 10979588 10979628 chr2R 10980133 10980171 297 6 545 14.5 6.5 10.5 0.5 583 chr2R 10979588 intergenic not near genes chr2R 10979880 intergenic not near genes chr2R 10980171 intergenic not near genes chr2R_6_10975001 chr2R_10975001 CanS-SH 758 chr2R 10981478 10981493 chr2R 10981634 10981649 5 156 22.0 5.5 13.8 0.3 171 chr2R 10981478 intergenic not near genes chr2R 10981564 intergenic not near genes chr2R 10981649 intergenic not near genes chr2R_5_10980001 chr2R_10980001 CanS-SH 759 chr2R 11009758 11009782 chr2R 11019007 11019031 roo 9 9249 16.0 7.0 11.5 0.7 9273 chr2R 11009758 intron luna - chr2R 11014394 intron luna - chr2R 11019031 intron luna - chr2R_9_11010001 chr2R_11010001 CanS-SH 760 chr2R 11019825 11019853 chr2R 11024966 11024994 jockey 11 5141 16.0 6.5 11.2 0.9 5169 chr2R 11019825 intron luna - chr2R 11022410 intron luna - chr2R 11024994 intron luna - chr2R_11_11020001 chr2R_11020001 CanS-SH 761 chr2R 11118088 11118149 chr2R 11118241 11118301 11 153 4.5 7.0 5.8 1.6 213 chr2R 11118088 3` UTR Cyp12d1-p - chr2R 11118194 3` UTR Cyp12d1-p - chr2R 11118301 3` UTR Cyp12d1-p - chr2R_11_11115001 chr2R_11115001 CanS-SH 762 chr2R 11154150 11154170 chr2R 11154345 11154365 8 195 12.5 8.5 10.5 0.7 215 chr2R 11154150 intron CG13229 - chr2R 11154258 intron CG13229 - chr2R 11154365 intron CG13229 - chr2R_8_11150001 chr2R_11150001 CanS-SH 763 chr2R 11155763 11155838 chr2R 11155942 11156017 18 179 4.5 10.0 7.2 2.2 254 chr2R 11155763 intron CG13229 - chr2R 11155890 intron CG13229 - chr2R 11156017 intron CG13229 - chr2R_18_11155001 chr2R_11155001 CanS-SH 764 chr2R 11161595 11161658 chr2R 11161810 11161873 14 215 4.0 8.5 6.2 1.9 278 chr2R 11161595 intron,intron CG13229 -,shn + chr2R 11161734 intron,intron CG13229 -,shn + chr2R 11161873 intron,intron CG13229 -,shn + chr2R_14_11160001 chr2R_11160001 CanS-SH 765 chr2R 11179204 11179271 chr2R 11179365 11179432 20 161 10.0 9.0 9.5 1.9 228 chr2R 11179204 intron shn + chr2R 11179318 intron shn + chr2R 11179432 intron shn + chr2R_20_11175001 chr2R_11175001 CanS-SH 766 chr2R 11202064 11202123 chr2R 11202233 11202292 21 169 12.0 12.0 12.0 1.6 228 chr2R 11202064 intron shn + chr2R 11202178 intron shn + chr2R 11202292 intron shn + chr2R_21_11200001 chr2R_11200001 CanS-SH 767 chr2R 11207761 11207791 chr2R 11208028 11208059 BS 12 268 13.5 12.5 13.0 0.9 298 chr2R 11207761 intron shn + chr2R 11207910 intron shn + chr2R 11208059 intron shn + chr2R_12_11205001 chr2R_11205001 CanS-SH 768 chr2R 11297558 11297592 chr2R 11301954 11301988 flea 15 4396 14.5 10.5 12.5 1.1 4430 chr2R 11297558 intergenic CG42336 - chr2R 11299773 intergenic not near genes chr2R 11301988 5` UTR CG7741 + chr2R_15_11295001 chr2R_11295001 CanS-SH 769 chr2R 11344073 11344159 chr2R 11344244 11344330 9 171 6.0 2.5 4.2 1.7 257 chr2R 11344073 intergenic alphaTry - chr2R 11344202 intergenic alphaTry - chr2R 11344330 exon alphaTry - chr2R_9_11340001 chr2R_11340001 CanS-SH 770 chr2R 11366098 11366166 chr2R 11366252 11366320 18 154 9.0 9.0 9.0 1.8 222 chr2R 11366098 intergenic not near genes chr2R 11366209 intergenic CG13204 + chr2R 11366320 intergenic CG13204 + chr2R_18_11365001 chr2R_11365001 CanS-SH 771 chr2R 11367964 11368053 chr2R 11368115 11368204 18 151 5.0 5.5 5.2 2.9 240 chr2R 11367964 intron CG13204 + chr2R 11368084 intron CG13204 + chr2R 11368204 intron CG13204 + chr2R_18_11365001 chr2R_11365001 CanS-SH 772 chr2R 11411654 11411746 chr2R 11411836 11411928 16 182 7.5 8.0 7.8 1.8 274 chr2R 11411654 intron Drip - chr2R 11411791 intron Drip - chr2R 11411928 intron Drip - chr2R_16_11410001 chr2R_11410001 CanS-SH 773 chr2R 11415454 11415491 chr2R 11418678 11418715 opus 19 3224 13.5 14.0 13.8 1.3 3261 chr2R 11415454 intron,3` UTR Drip -,CG7763 + chr2R 11417084 intron Drip - chr2R 11418715 intron Drip - chr2R_19_11415001 chr2R_11415001 CanS-SH 774 chr2R 11472587 11472629 chr2R 11473859 11473901 pogo 14 1272 12.5 15.0 13.8 0.9 1314 chr2R 11472587 intergenic not near genes chr2R 11473244 intergenic not near genes chr2R 11473901 intergenic not near genes chr2R_14_11470001 chr2R_11470001 CanS-SH 775 chr2R 11480720 11480793 chr2R 11480895 11480961 20 173 4.5 6.0 5.2 3.2 241 chr2R 11480720 intron inv + chr2R 11480840 intron inv + chr2R 11480961 intron inv + chr2R_20_11480001 chr2R_11480001 CanS-SH 776 chr2R 11540721 11540815 chr2R 11540899 11540982 20 168 0.0 7.5 3.8 4.2 261 chr2R 11540721 intergenic not near genes chr2R 11540852 intergenic not near genes chr2R 11540982 intergenic not near genes chr2R_20_11540001 chr2R_11540001 CanS-SH 777 chr2R 11568643 11568665 chr2R 11568828 11568850 4 185 6.5 7.0 6.8 0.5 207 chr2R 11568643 intergenic not near genes chr2R 11568746 intergenic not near genes chr2R 11568850 intergenic not near genes chr2R_4_11565001 chr2R_11565001 CanS-SH 778 chr2R 11614560 11614790 chr2R 11614723 11614953 44 163 0.0 0.0 0.0 44.0 393 chr2R 11614560 intron tou - chr2R 11614756 intron tou - chr2R 11614953 intron tou - chr2R_44_11610001 chr2R_11610001 CanS-SH 779 chr2R 11625238 11625243 chr2R 11625391 11625396 4 153 13.5 0.0 6.8 0.5 158 chr2R 11625238 5` UTR CG9005 - chr2R 11625317 intron CG9005 - chr2R 11625396 intron CG9005 - chr2R_4_11625001 chr2R_11625001 CanS-SH 780 chr2R 11631300 11631406 chr2R 11631476 11631561 28 166 0.0 7.5 3.8 5.8 261 chr2R 11631300 intron CG9005 - chr2R 11631430 intron CG9005 - chr2R 11631561 intron CG9005 - chr2R_28_11630001 chr2R_11630001 CanS-SH 781 chr2R 11641803 11641858 chr2R 11641972 11642026 16 169 9.0 10.0 9.5 1.5 223 chr2R 11641803 3` UTR CG9003 - chr2R 11641914 3` UTR CG9003 - chr2R 11642026 3` UTR CG9003 - chr2R_16_11640001 chr2R_11640001 CanS-SH 782 chr2R 11677798 11677895 chr2R 11677951 11678048 36 153 7.5 7.0 7.2 4.4 250 chr2R 11677798 intron,exon Roc2 -,Tret1-2 + chr2R 11677923 intron,3` UTR Roc2 -,Tret1-2 + chr2R 11678048 intron Roc2 - chr2R_36_11675001 chr2R_11675001 CanS-SH 783 chr2R 11822924 11822973 chr2R 11823076 11823125 15 152 0.0 6.5 3.2 3.6 201 chr2R 11822924 intergenic not near genes chr2R 11823024 intergenic not near genes chr2R 11823125 intergenic not near genes chr2R_15_11820001 chr2R_11820001 CanS-SH 784 chr2R 11934017 11934093 chr2R 11934174 11934250 34 157 8.5 12.0 10.2 3.0 233 chr2R 11934017 intergenic not near genes chr2R 11934134 intergenic not near genes chr2R 11934250 intergenic not near genes chr2R_34_11930001 chr2R_11930001 CanS-SH 785 chr2R 12097721 12097757 chr2R 12097891 12097927 12 170 6.0 8.5 7.2 1.5 206 chr2R 12097721 intron jeb - chr2R 12097824 intron jeb - chr2R 12097927 intron jeb - chr2R_12_12095001 chr2R_12095001 CanS-SH 786 chr2R 12103207 12103238 chr2R 12103550 12103581 9 343 11.0 12.5 11.8 0.7 374 chr2R 12103207 intron jeb - chr2R 12103394 intron jeb - chr2R 12103581 intron jeb - chr2R_9_12100001 chr2R_12100001 CanS-SH 787 chr2R 12124763 12124839 chr2R 12124922 12124998 21 159 14.5 5.5 10.0 1.9 235 chr2R 12124763 intergenic not near genes chr2R 12124880 intergenic not near genes chr2R 12124998 intergenic not near genes chr2R_21_12120001 chr2R_12120001 CanS-SH 788 chr2R 12217502 12217593 chr2R 12217658 12217749 27 156 10.0 12.0 11.0 2.2 247 chr2R 12217502 intergenic not near genes chr2R 12217626 intergenic not near genes chr2R 12217749 intergenic not near genes chr2R_27_12215001 chr2R_12215001 CanS-SH 789 chr2R 12236135 12236227 chr2R 12236317 12236409 8 182 7.0 4.5 5.8 1.2 274 chr2R 12236135 intergenic not near genes chr2R 12236272 intergenic not near genes chr2R 12236409 intergenic not near genes chr2R_8_12235001 chr2R_12235001 CanS-SH 790 chr2R 12413097 12413099 chr2R 12413248 12413250 4 151 9.0 0.0 4.5 0.7 153 chr2R 12413097 intergenic not near genes chr2R 12413174 intergenic not near genes chr2R 12413250 intergenic not near genes chr2R_4_12410001 chr2R_12410001 CanS-SH 791 chr2R 12439368 12439392 chr2R 12439521 12439545 12 153 2.5 16.0 9.2 1.2 177 chr2R 12439368 intron Dyb + chr2R 12439456 intron Dyb + chr2R 12439545 intron Dyb + chr2R_12_12435001 chr2R_12435001 CanS-SH 792 chr2R 12501633 12501665 chr2R 12503870 12503902 Rt1c 14 2237 8.0 10.0 9.0 1.4 2269 chr2R 12501633 intron fdl - chr2R 12502768 intron fdl - chr2R 12503902 intron fdl - chr2R_14_12500001 chr2R_12500001 CanS-SH 793 chr2R 12524514 12524613 chr2R 12524786 12524877 21 271 3.0 5.0 4.0 4.2 363 chr2R 12524514 intergenic not near genes chr2R 12524696 intergenic not near genes chr2R 12524877 intergenic not near genes chr2R_21_12520001 chr2R_12520001 CanS-SH 794 chr2R 12540410 12540493 chr2R 12540568 12540651 26 158 5.5 7.5 6.5 3.5 241 chr2R 12540410 intron fra + chr2R 12540530 intron fra + chr2R 12540651 intron fra + chr2R_26_12540001 chr2R_12540001 CanS-SH 795 chr2R 12565495 12565560 chr2R 12565950 12565984 12 432 0.0 8.0 4.0 2.4 489 chr2R 12565495 intergenic not near genes chr2R 12565740 intergenic Cyp301a1 + chr2R 12565984 intergenic Cyp301a1 + chr2R_12_12565001 chr2R_12565001 CanS-SH 796 chr2R 12590632 12590670 chr2R 12590927 12590965 20 295 20.0 13.0 16.5 1.1 333 chr2R 12590632 intron,5` UTR Sin3A -,CR30055 + chr2R 12590798 intron,5` UTR Sin3A -,CR30055 + chr2R 12590965 intron,5` UTR Sin3A -,CR30055 + chr2R_20_12590001 chr2R_12590001 CanS-SH 797 chr2R 12607681 12607700 chr2R 12607884 12607903 5 203 7.0 14.5 10.8 0.4 222 chr2R 12607681 exon Amph + chr2R 12607792 intron Amph + chr2R 12607903 intron Amph + chr2R_5_12605001 chr2R_12605001 CanS-SH 798 chr2R 12643723 12643810 chr2R 12643873 12643962 13 151 4.5 1.5 3.0 3.2 239 chr2R 12643723 intron CG8785 - chr2R 12643842 intron CG8785 - chr2R 12643962 exon CG8785 - chr2R_13_12640001 chr2R_12640001 CanS-SH 799 chr2R 12670441 12670505 chr2R 12670608 12670672 9 167 6.0 8.0 7.0 1.1 231 chr2R 12670441 intergenic CG42708 -,nemy - chr2R 12670556 3` UTR CG42708 - chr2R 12670672 3` UTR CG42708 - chr2R_9_12670001 chr2R_12670001 CanS-SH 800 chr2R 12671406 12671415 chr2R 12671588 12671597 6 182 6.0 15.5 10.8 0.5 191 chr2R 12671406 intron CG42708 - chr2R 12671502 intron CG42708 - chr2R 12671597 exon CG42708 - chr2R_6_12670001 chr2R_12670001 CanS-SH 801 chr2R 12707454 12707494 chr2R 12715895 12715935 roo 21 8441 14.0 9.5 11.8 1.6 8481 chr2R 12707454 intron CG42663 + chr2R 12711694 intron CG42663 + chr2R 12715935 intron CG42663 + chr2R_21_12710001 chr2R_12710001 CanS-SH 802 chr2R 12726259 12726334 chr2R 12726426 12726501 22 167 8.0 11.0 9.5 2.1 242 chr2R 12726259 intron CG42663 + chr2R 12726380 intron CG42663 + chr2R 12726501 intron CG42663 + chr2R_22_12725001 chr2R_12725001 CanS-SH 803 chr2R 12728756 12728856 chr2R 12728981 12729079 9 219 0.0 6.5 3.2 2.1 323 chr2R 12728756 intron CG42663 + chr2R 12728918 intron CG42663 + chr2R 12729079 intron CG42663 + chr2R_9_12725001 chr2R_12725001 CanS-SH 804 chr2R 12739074 12739155 chr2R 12739225 12739306 8 151 7.0 10.0 8.5 0.8 232 chr2R 12739074 intron CG42663 + chr2R 12739190 intron CG42663 + chr2R 12739306 intron CG42663 + chr2R_8_12735001 chr2R_12735001 CanS-SH 805 chr2R 12777732 12777749 chr2R 12777912 12777929 5 180 15.5 7.0 11.2 0.4 197 chr2R 12777732 5` UTR CR45266 + chr2R 12777830 5` UTR CR45266 + chr2R 12777929 5` UTR CR45266 + chr2R_5_12775001 chr2R_12775001 CanS-SH 806 chr2R 12789235 12789271 chr2R 12797673 12797709 roo 7 8438 7.5 6.0 6.8 0.9 8474 chr2R 12789235 intron,3` UTR sca +,CR45137 - chr2R 12793472 intron,intron sca +,CR45137 - chr2R 12797709 intron,3` UTR sca +,CR45137 - chr2R_7_12790001 chr2R_12790001 CanS-SH 807 chr2R 12819384 12819427 chr2R 12824528 12824571 jockey 12 5144 12.0 7.5 9.8 1.1 5187 chr2R 12819384 intergenic not near genes chr2R 12821978 intergenic not near genes chr2R 12824571 intergenic not near genes chr2R_12_12820001 chr2R_12820001 CanS-SH 808 chr2R 12836317 12836408 chr2R 12836479 12836570 42 162 7.5 10.0 8.8 4.3 253 chr2R 12836317 intergenic not near genes chr2R 12836444 intergenic not near genes chr2R 12836570 intergenic not near genes chr2R_42_12835001 chr2R_12835001 CanS-SH 809 chr2R 12907548 12907596 chr2R 12907714 12907762 12 166 9.5 8.0 8.8 1.2 214 chr2R 12907548 intergenic CR44461 + chr2R 12907655 intergenic CR44461 + chr2R 12907762 intergenic CR44461 + chr2R_12_12905001 chr2R_12905001 CanS-SH 810 chr2R 12915754 12915835 chr2R 12915924 12916005 15 170 10.5 11.0 10.8 1.3 251 chr2R 12915754 intergenic NAT1 + chr2R 12915880 intergenic NAT1 + chr2R 12916005 5` UTR NAT1 + chr2R_15_12915001 chr2R_12915001 CanS-SH 811 chr2R 13034608 13034688 chr2R 13034792 13034872 13 184 0.0 12.0 6.0 1.9 264 chr2R 13034608 intergenic not near genes chr2R 13034740 intergenic not near genes chr2R 13034872 intergenic not near genes chr2R_13_13030001 chr2R_13030001 CanS-SH 812 chr2R 13042983 13043043 chr2R 13043155 13043215 10 172 8.0 4.0 6.0 1.4 232 chr2R 13042983 intergenic not near genes chr2R 13043099 intergenic not near genes chr2R 13043215 intergenic not near genes chr2R_10_13040001 chr2R_13040001 CanS-SH 813 chr2R 13089684 13089739 chr2R 13089869 13089924 10 185 10.5 1.5 6.0 1.4 240 chr2R 13089684 intergenic not near genes chr2R 13089804 intergenic not near genes chr2R 13089924 intergenic not near genes chr2R_10_13085001 chr2R_13085001 CanS-SH 814 chr2R 13107788 13107800 chr2R 13107952 13107964 6 164 21.5 0.0 10.8 0.5 176 chr2R 13107788 intergenic not near genes chr2R 13107876 intergenic not near genes chr2R 13107964 intergenic not near genes chr2R_6_13105001 chr2R_13105001 CanS-SH 815 chr2R 13136782 13136812 chr2R 13141655 13141685 Doc 13 4873 21.0 7.5 14.2 0.9 4903 chr2R 13136782 exon Cap-G + chr2R 13139234 intron Cap-G + chr2R 13141685 intron Cap-G + chr2R_13_13135001 chr2R_13135001 CanS-SH 816 chr2R 13164814 13164832 chr2R 13164969 13164987 10 155 7.0 9.0 8.0 1.1 173 chr2R 13164814 exon GLaz - chr2R 13164900 intron GLaz - chr2R 13164987 intron GLaz - chr2R_10_13160001 chr2R_13160001 CanS-SH 817 chr2R 13167370 13167462 chr2R 13167539 13167637 17 172 5.5 0.0 2.8 4.5 267 chr2R 13167370 intron GLaz - chr2R 13167504 intron GLaz - chr2R 13167637 intron GLaz - chr2R_17_13165001 chr2R_13165001 CanS-SH 818 chr2R 13194783 13194833 chr2R 13194955 13195004 11 172 11.0 9.5 10.2 1.0 221 chr2R 13194783 intergenic not near genes chr2R 13194894 intergenic not near genes chr2R 13195004 intergenic not near genes chr2R_11_13190001 chr2R_13190001 CanS-SH 819 chr2R 13220465 13220487 chr2R 13220618 13220640 8 153 14.5 3.0 8.8 0.8 175 chr2R 13220465 intron CG17059 + chr2R 13220552 intron CG17059 + chr2R 13220640 intron CG17059 + chr2R_8_13220001 chr2R_13220001 CanS-SH 820 chr2R 13369636 13369766 chr2R 13369832 13369917 4 162 0.0 6.0 3.0 1.0 281 chr2R 13369636 intergenic not near genes chr2R 13369776 intergenic not near genes chr2R 13369917 intergenic not near genes chr2R_4_13365001 chr2R_13365001 CanS-SH 821 chr2R 13376583 13376637 chr2R 13376768 13376822 10 185 3.5 11.0 7.2 1.2 239 chr2R 13376583 intron CG10814 - chr2R 13376702 intron CG10814 - chr2R 13376822 exon CG10814 - chr2R_10_13375001 chr2R_13375001 CanS-SH 822 chr2R 13431444 13431509 chr2R 13431598 13431663 25 154 9.0 9.5 9.2 2.5 219 chr2R 13431444 intron CG42321 - chr2R 13431554 intron CG42321 - chr2R 13431663 intron CG42321 - chr2R_25_13430001 chr2R_13430001 CanS-SH 823 chr2R 13439059 13439135 chr2R 13439272 13439348 14 213 5.5 5.0 5.2 2.3 289 chr2R 13439059 intergenic CG42321 -,cnn - chr2R 13439204 intergenic cnn -,CG42321 - chr2R 13439348 3` UTR cnn - chr2R_14_13435001 chr2R_13435001 CanS-SH 824 chr2R 13544477 13544556 chr2R 13544637 13544707 21 153 0.0 8.0 4.0 4.2 230 chr2R 13544477 intron CG6145 - chr2R 13544592 intron CG6145 - chr2R 13544707 intron CG6145 - chr2R_21_13540001 chr2R_13540001 CanS-SH 825 chr2R 13547011 13547103 chr2R 13547282 13547373 13 271 3.5 8.5 6.0 1.9 362 chr2R 13547011 intron CG6145 - chr2R 13547192 intron CG6145 - chr2R 13547373 intron CG6145 - chr2R_13_13545001 chr2R_13545001 CanS-SH 826 chr2R 13554669 13554754 chr2R 13554827 13554914 6 160 0.0 7.5 3.8 1.2 245 chr2R 13554669 exon Roe1 + chr2R 13554792 intron Roe1 + chr2R 13554914 intron Roe1 + chr2R_6_13550001 chr2R_13550001 CanS-SH 827 chr2R 13568137 13568192 chr2R 13568317 13568372 12 180 5.5 1.5 3.5 2.7 235 chr2R 13568137 intergenic not near genes chr2R 13568254 intergenic not near genes chr2R 13568372 intergenic not near genes chr2R_12_13565001 chr2R_13565001 CanS-SH 828 chr2R 13580432 13580469 chr2R 13580857 13580895 jockey 12 426 17.0 7.0 12.0 0.9 463 chr2R 13580432 3` UTR CG6191 - chr2R 13580664 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580895 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_12_13580001 chr2R_13580001 CanS-SH 829 chr2R 13599553 13599563 chr2R 13599714 13599724 6 161 4.5 3.5 4.0 1.2 171 chr2R 13599553 intergenic not near genes chr2R 13599638 intergenic not near genes chr2R 13599724 intergenic not near genes chr2R_6_13595001 chr2R_13595001 CanS-SH 830 chr2R 13608222 13608277 chr2R 13608381 13608436 22 159 9.0 8.5 8.8 2.2 214 chr2R 13608222 intergenic CG12464 - chr2R 13608329 intergenic CG12464 - chr2R 13608436 intergenic CG12464 - chr2R_22_13605001 chr2R_13605001 CanS-SH 831 chr2R 13622167 13622182 chr2R 13622323 13622338 5 156 0.0 20.5 10.2 0.4 171 chr2R 13622167 intergenic not near genes chr2R 13622252 intergenic not near genes chr2R 13622338 intergenic not near genes chr2R_5_13620001 chr2R_13620001 CanS-SH 832 chr2R 13648417 13648461 chr2R 13648678 13648722 13 261 13.0 9.0 11.0 1.1 305 chr2R 13648417 intron fas + chr2R 13648570 intron fas + chr2R 13648722 intron fas + chr2R_13_13645001 chr2R_13645001 CanS-SH 833 chr2R 13692253 13692334 chr2R 13692412 13692493 13 159 7.5 7.5 7.5 1.5 240 chr2R 13692253 intron,exon fas +,CG6220 - chr2R 13692373 intron,intron fas +,CG6220 - chr2R 13692493 intron,intron fas +,CG6220 - chr2R_13_13690001 chr2R_13690001 CanS-SH 834 chr2R 13694605 13694653 chr2R 13694756 13694805 17 152 8.5 18.5 13.5 1.2 200 chr2R 13694605 intron fas + chr2R 13694705 intron fas + chr2R 13694805 intron fas + chr2R_17_13690001 chr2R_13690001 CanS-SH 835 chr2R 13709775 13709847 chr2R 13709943 13710015 21 168 7.5 9.5 8.5 2.2 240 chr2R 13709775 intron fas + chr2R 13709895 intron fas + chr2R 13710015 intron fas + chr2R_21_13705001 chr2R_13705001 CanS-SH 836 chr2R 13728069 13728109 chr2R 13735801 13735841 opus 14 7732 15.0 9.5 12.2 1.1 7772 chr2R 13728069 intron fas + chr2R 13731955 intron fas + chr2R 13735841 intron fas + chr2R_14_13730001 chr2R_13730001 CanS-SH 837 chr2R 13764438 13764458 chr2R 13764643 13764663 7 205 7.0 0.0 3.5 1.6 225 chr2R 13764438 intergenic not near genes chr2R 13764550 intergenic not near genes chr2R 13764663 intergenic not near genes chr2R_7_13760001 chr2R_13760001 CanS-SH 838 chr2R 13768920 13768979 chr2R 13769094 13769153 15 174 11.5 7.0 9.2 1.5 233 chr2R 13768920 intergenic not near genes chr2R 13769036 intergenic not near genes chr2R 13769153 intergenic not near genes chr2R_15_13765001 chr2R_13765001 CanS-SH 839 chr2R 13770438 13770523 chr2R 13770610 13770688 7 169 0.0 9.0 4.5 1.3 250 chr2R 13770438 intron Cpr50Ca + chr2R 13770563 intron Cpr50Ca + chr2R 13770688 intron Cpr50Ca + chr2R_7_13770001 chr2R_13770001 CanS-SH 840 chr2R 13771388 13771413 chr2R 13771539 13771564 7 151 8.0 0.0 4.0 1.4 176 chr2R 13771388 intron Cpr50Ca + chr2R 13771476 intron Cpr50Ca + chr2R 13771564 intron Cpr50Ca + chr2R_7_13770001 chr2R_13770001 CanS-SH 841 chr2R 13817632 13817669 chr2R 13817791 13817828 7 159 14.5 11.0 12.8 0.5 196 chr2R 13817632 intron stj + chr2R 13817730 intron stj + chr2R 13817828 intron stj + chr2R_7_13815001 chr2R_13815001 CanS-SH 842 chr2R 13905545 13905577 chr2R 13907602 13907634 Rt1a 16 2057 13.0 12.5 12.8 1.2 2089 chr2R 13905545 intron shot - chr2R 13906590 intron shot - chr2R 13907634 intron shot - chr2R_16_13905001 chr2R_13905001 CanS-SH 843 chr2R 13924400 13924449 chr2R 13924592 13924637 5 190 15.5 3.5 9.5 0.5 237 chr2R 13924400 intron shot - chr2R 13924518 intron shot - chr2R 13924637 intron shot - chr2R_5_13920001 chr2R_13920001 CanS-SH 844 chr2R 13925806 13925842 chr2R 13926035 13926071 16 229 19.0 11.0 15.0 1.0 265 chr2R 13925806 intron shot - chr2R 13925938 intron shot - chr2R 13926071 intron shot - chr2R_16_13925001 chr2R_13925001 CanS-SH 845 chr2R 13979601 13979652 chr2R 13979787 13979838 15 186 16.0 10.0 13.0 1.1 237 chr2R 13979601 5` UTR CG6701 - chr2R 13979720 5` UTR CG6701 - chr2R 13979838 5` UTR CG6701 - chr2R_15_13975001 chr2R_13975001 CanS-SH 846 chr2R 14031307 14031332 chr2R 14031473 14031498 13 166 4.5 4.0 4.2 2.5 191 chr2R 14031307 intron mam + chr2R 14031402 intron mam + chr2R 14031498 intron mam + chr2R_13_14030001 chr2R_14030001 CanS-SH 847 chr2R 14036542 14036569 chr2R 14036694 14036721 8 152 9.0 6.5 7.8 0.9 179 chr2R 14036542 intron mam + chr2R 14036632 intron mam + chr2R 14036721 intron mam + chr2R_8_14035001 chr2R_14035001 CanS-SH 848 chr2R 14037189 14037282 chr2R 14037347 14037440 14 158 7.5 9.5 8.5 1.5 251 chr2R 14037189 intron mam + chr2R 14037314 intron mam + chr2R 14037440 intron mam + chr2R_14_14035001 chr2R_14035001 CanS-SH 849 chr2R 14051383 14051410 chr2R 14051536 14051563 11 153 12.5 17.5 15.0 0.7 180 chr2R 14051383 intron mam + chr2R 14051473 intron mam + chr2R 14051563 intron mam + chr2R_11_14050001 chr2R_14050001 CanS-SH 850 chr2R 14077975 14078098 chr2R 14078149 14078254 17 171 1.0 5.0 3.0 4.2 279 chr2R 14077975 intron Prosap - chr2R 14078114 intron Prosap - chr2R 14078254 intron Prosap - chr2R_17_14075001 chr2R_14075001 CanS-SH 851 chr2R 14141894 14141934 chr2R 14142074 14142114 9 180 14.5 15.5 15.0 0.6 220 chr2R 14141894 intergenic not near genes chr2R 14142004 intergenic not near genes chr2R 14142114 intergenic not near genes chr2R_9_14140001 chr2R_14140001 CanS-SH 852 chr2R 14277524 14277599 chr2R 14277681 14277756 23 157 4.0 10.5 7.2 2.8 232 chr2R 14277524 5` UTR Ih + chr2R 14277640 5` UTR Ih + chr2R 14277756 5` UTR Ih + chr2R_23_14275001 chr2R_14275001 CanS-SH 853 chr2R 14284983 14285051 chr2R 14285141 14285209 13 158 13.5 8.5 11.0 1.1 226 chr2R 14284983 intron Ih + chr2R 14285096 intron Ih + chr2R 14285209 intron Ih + chr2R_13_14285001 chr2R_14285001 CanS-SH 854 chr2R 14318510 14318600 chr2R 14318670 14318767 15 165 4.0 0.0 2.0 5.0 257 chr2R 14318510 intron Shroom + chr2R 14318638 intron Shroom + chr2R 14318767 intron Shroom + chr2R_15_14315001 chr2R_14315001 CanS-SH 855 chr2R 14357482 14357570 chr2R 14357647 14357735 26 165 7.5 5.0 6.2 3.6 253 chr2R 14357482 intergenic CG8617 -,Arc1 - chr2R 14357608 intergenic Arc1 -,CG8617 - chr2R 14357735 intergenic Arc1 -,CG8617 - chr2R_26_14355001 chr2R_14355001 CanS-SH 856 chr2R 14393803 14393883 chr2R 14393963 14394043 25 160 9.5 7.0 8.2 2.7 240 chr2R 14393803 intergenic not near genes chr2R 14393923 intergenic not near genes chr2R 14394043 intergenic not near genes chr2R_25_14390001 chr2R_14390001 CanS-SH 857 chr2R 14394186 14394197 chr2R 14399092 14399103 Doc 5 4906 15.0 12.5 13.8 0.3 4917 chr2R 14394186 intergenic not near genes chr2R 14396644 intergenic not near genes chr2R 14399103 intergenic not near genes chr2R_5_14395001 chr2R_14395001 CanS-SH 858 chr2R 14457433 14457445 chr2R 14457584 14457596 4 151 0.0 1.0 0.5 2.7 163 chr2R 14457433 intron Oaz + chr2R 14457514 intron Oaz + chr2R 14457596 intron Oaz + chr2R_4_14455001 chr2R_14455001 CanS-SH 859 chr2R 14467234 14467270 chr2R 14476467 14476503 roo 12 9233 15.0 3.5 9.2 1.2 9269 chr2R 14467234 intergenic not near genes chr2R 14471868 intergenic not near genes chr2R 14476503 5` UTR CR44462 + chr2R_12_14470001 chr2R_14470001 CanS-SH 860 chr2R 14497313 14497386 chr2R 14498551 14498623 1360 13 1238 6.0 8.5 7.2 1.6 1310 chr2R 14497313 intergenic L +,Cpsf160 - chr2R 14497968 intron Cpsf160 - chr2R 14498623 3` UTR Cpsf160 - chr2R_13_14495001 chr2R_14495001 CanS-SH 861 chr2R 14514399 14514459 chr2R 14514586 14514645 12 187 18.0 10.5 14.2 0.8 246 chr2R 14514399 intron,exon Cpr51A -,CG30197 + chr2R 14514522 intron,intron Cpr51A -,CG30197 + chr2R 14514645 intron,intron Cpr51A -,CG30197 + chr2R_12_14510001 chr2R_14510001 CanS-SH 862 chr2R 14556144 14556193 chr2R 14556304 14556353 17 160 13.5 5.0 9.2 1.7 209 chr2R 14556144 intron ttv + chr2R 14556248 intron ttv + chr2R 14556353 intron ttv + chr2R_17_14555001 chr2R_14555001 CanS-SH 863 chr2R 14657475 14657483 chr2R 14657627 14657635 6 152 12.0 2.5 7.2 0.7 160 chr2R 14657475 exon Adgf-E - chr2R 14657555 intron Adgf-E - chr2R 14657635 intron Adgf-E - chr2R_6_14655001 chr2R_14655001 CanS-SH 864 chr2R 14700470 14700487 chr2R 14700691 14700708 6 221 17.5 16.0 16.8 0.3 238 chr2R 14700470 intron mspo - chr2R 14700589 intron mspo - chr2R 14700708 intron mspo - chr2R_6_14700001 chr2R_14700001 CanS-SH 865 chr2R 14722244 14722263 chr2R 14722421 14722442 5 178 22.5 13.0 17.8 0.3 198 chr2R 14722244 intergenic not near genes chr2R 14722343 intergenic not near genes chr2R 14722442 intergenic not near genes chr2R_5_14720001 chr2R_14720001 CanS-SH 866 chr2R 14737555 14737623 chr2R 14737714 14737782 18 159 13.5 11.0 12.2 1.4 227 chr2R 14737555 intergenic CR43428 - chr2R 14737668 3` UTR CR43428 - chr2R 14737782 3` UTR CR43428 - chr2R_18_14735001 chr2R_14735001 CanS-SH 867 chr2R 14803416 14803495 chr2R 14803571 14803650 21 155 10.5 11.0 10.8 1.8 234 chr2R 14803416 intron kn - chr2R 14803533 intron kn - chr2R 14803650 intron kn - chr2R_21_14800001 chr2R_14800001 CanS-SH 868 chr2R 14816042 14816111 chr2R 14816213 14816282 14 171 8.0 4.0 6.0 2.0 240 chr2R 14816042 intergenic not near genes chr2R 14816162 intergenic not near genes chr2R 14816282 intergenic not near genes chr2R_14_14815001 chr2R_14815001 CanS-SH 869 chr2R 14873630 14873663 chr2R 14875223 14875256 10 1593 16.5 0.0 8.2 1.1 1626 chr2R 14873630 intergenic Cyp6a22 +,Cyp6a17 + chr2R 14874443 exon Cyp6a17 + chr2R 14875256 exon Cyp6a17 + chr2R_10_14870001 chr2R_14870001 CanS-SH 870 chr2R 14875205 14875266 chr2R 14875692 14875753 10 487 0.0 18.0 9.0 1.0 548 chr2R 14875205 exon Cyp6a17 + chr2R 14875479 exon Cyp6a17 + chr2R 14875753 intergenic Cyp6a17 +,Cyp6a23 + chr2R_10_14875001 chr2R_14875001 CanS-SH 871 chr2R 14889151 14889200 chr2R 14897834 14897875 Max-element 14 8680 13.5 6.0 9.8 1.3 8724 chr2R 14889151 intergenic Cyp6a8 - chr2R 14893513 intergenic not near genes chr2R 14897875 intergenic not near genes chr2R_14_14890001 chr2R_14890001 CanS-SH 872 chr2R 14911632 14911674 chr2R 14911830 14911871 15 198 18.5 9.5 14.0 1.0 239 chr2R 14911632 intron CG10249 - chr2R 14911752 intron CG10249 - chr2R 14911871 intron CG10249 - chr2R_15_14910001 chr2R_14910001 CanS-SH 873 chr2R 14919113 14919134 chr2R 14919297 14919318 10 184 8.5 0.0 4.2 1.9 205 chr2R 14919113 intron CG10249 - chr2R 14919216 intron CG10249 - chr2R 14919318 intron CG10249 - chr2R_10_14915001 chr2R_14915001 CanS-SH 874 chr2R 14934441 14934485 chr2R 14934608 14934652 12 167 0.0 4.0 2.0 4.0 211 chr2R 14934441 intron CG10253 - chr2R 14934546 intron CG10253 - chr2R 14934652 intron CG10253 - chr2R_12_14930001 chr2R_14930001 CanS-SH 875 chr2R 14957589 14957667 chr2R 14957759 14957839 16 171 5.0 3.5 4.2 3.1 250 chr2R 14957589 intron aPKC - chr2R 14957714 intron aPKC - chr2R 14957839 intron aPKC - chr2R_16_14955001 chr2R_14955001 CanS-SH 876 chr2R 14987321 14987363 chr2R 14987540 14987582 20 219 13.5 10.5 12.0 1.5 261 chr2R 14987321 intron pcs + chr2R 14987452 intron pcs + chr2R 14987582 intron pcs + chr2R_20_14985001 chr2R_14985001 CanS-SH 877 chr2R 14998441 14998506 chr2R 14998656 14998721 10 215 9.0 8.0 8.5 1.1 280 chr2R 14998441 intergenic not near genes chr2R 14998581 intergenic not near genes chr2R 14998721 intergenic not near genes chr2R_10_14995001 chr2R_14995001 CanS-SH 878 chr2R 15004666 15004703 chr2R 15005070 15005107 jockey 17 404 17.0 12.5 14.8 1.1 441 chr2R 15004666 intergenic not near genes chr2R 15004886 intergenic not near genes chr2R 15005107 intergenic not near genes chr2R_17_15000001 chr2R_15000001 CanS-SH 879 chr2R 15015420 15015434 chr2R 15022915 15022929 mdg1 7 7495 16.0 0.0 8.0 0.8 7509 chr2R 15015420 intron hbs + chr2R 15019174 intron hbs + chr2R 15022929 intron hbs + chr2R_7_15015001 chr2R_15015001 CanS-SH 880 chr2R 15058134 15058165 chr2R 15058341 15058371 10 207 14.0 4.5 9.2 1.0 237 chr2R 15058134 intergenic not near genes chr2R 15058252 intergenic not near genes chr2R 15058371 intergenic not near genes chr2R_10_15055001 chr2R_15055001 CanS-SH 881 chr2R 15084918 15084954 chr2R 15092042 15092078 297 9 7124 11.5 11.5 11.5 0.7 7160 chr2R 15084918 intergenic not near genes chr2R 15088498 intergenic not near genes chr2R 15092078 5` UTR CR44457 + chr2R_9_15085001 chr2R_15085001 CanS-SH 882 chr2R 15119264 15119294 chr2R 15127820 15127850 Tirant 11 8556 16.5 11.0 13.8 0.7 8586 chr2R 15119264 intron chn + chr2R 15123557 intron chn + chr2R 15127850 intron chn + chr2R_11_15120001 chr2R_15120001 CanS-SH 883 chr2R 15152163 15152200 chr2R 15152363 15152400 14 200 18.5 7.0 12.8 1.0 237 chr2R 15152163 intergenic not near genes chr2R 15152282 intergenic not near genes chr2R 15152400 intergenic not near genes chr2R_14_15150001 chr2R_15150001 CanS-SH 884 chr2R 15160706 15160768 chr2R 15160886 15160948 14 180 13.0 9.0 11.0 1.2 242 chr2R 15160706 intron igl + chr2R 15160827 intron igl + chr2R 15160948 intron igl + chr2R_14_15160001 chr2R_15160001 CanS-SH 885 chr2R 15181523 15181568 chr2R 15181880 15181924 25 357 10.0 9.5 9.8 2.3 401 chr2R 15181523 intron igl + chr2R 15181724 intron igl + chr2R 15181924 intron igl + chr2R_25_15180001 chr2R_15180001 CanS-SH 886 chr2R 15201163 15201244 chr2R 15201329 15201410 31 166 13.0 6.5 9.8 2.9 247 chr2R 15201163 5` UTR GPHR - chr2R 15201286 5` UTR CG11807 + chr2R 15201410 intron CG11807 + chr2R_31_15200001 chr2R_15200001 CanS-SH 887 chr2R 15295302 15295397 chr2R 15295518 15295557 6 188 0.0 8.0 4.0 1.2 255 chr2R 15295302 intron Trpm - chr2R 15295430 intron Trpm - chr2R 15295557 intron Trpm - chr2R_6_15295001 chr2R_15295001 CanS-SH 888 chr2R 15296085 15296170 chr2R 15296243 15296328 15 158 7.0 6.0 6.5 2.0 243 chr2R 15296085 intron Trpm - chr2R 15296206 intron Trpm - chr2R 15296328 intron Trpm - chr2R_15_15295001 chr2R_15295001 CanS-SH 889 chr2R 15330121 15330183 chr2R 15330338 15330392 7 214 0.0 5.0 2.5 2.0 271 chr2R 15330121 intergenic CR44371 - chr2R 15330256 intergenic CR44371 - chr2R 15330392 intergenic CR44371 - chr2R_7_15330001 chr2R_15330001 CanS-SH 890 chr2R 15340627 15340659 chr2R 15349285 15349317 Tirant 16 8658 15.0 12.5 13.8 1.1 8690 chr2R 15340627 intron unc-5 + chr2R 15344972 intron unc-5 + chr2R 15349317 intron unc-5 + chr2R_16_15340001 chr2R_15340001 CanS-SH 891 chr2R 15372368 15372397 chr2R 15375585 15375614 5 3217 61.5 0.0 30.8 0.2 3246 chr2R 15372368 5` UTR CR44458 + chr2R 15373991 intergenic not near genes chr2R 15375614 intergenic not near genes chr2R_5_15370001 chr2R_15370001 CanS-SH 892 chr2R 15404050 15404092 chr2R 15404222 15404265 10 172 7.0 9.5 8.2 1.1 215 chr2R 15404050 intron CG43729 + chr2R 15404158 intron CG43729 + chr2R 15404265 intron CG43729 + chr2R_10_15400001 chr2R_15400001 CanS-SH 893 chr2R 15497609 15497695 chr2R 15497763 15497849 10 154 3.0 0.0 1.5 4.0 240 chr2R 15497609 intergenic CG12964 - chr2R 15497729 intergenic CG12964 - chr2R 15497849 intergenic not near genes chr2R_10_15495001 chr2R_15495001 CanS-SH 894 chr2R 15645629 15645702 chr2R 15645800 15645872 7 171 0.0 0.0 0.0 7.0 243 chr2R 15645629 intron CG42524 + chr2R 15645750 intron CG42524 + chr2R 15645872 intron CG42524 + chr2R_7_15645001 chr2R_15645001 CanS-SH 895 chr2R 15655988 15656021 chr2R 15656152 15656187 5 165 8.0 9.0 8.5 0.5 199 chr2R 15655988 intron CG42524 + chr2R 15656088 intron CG42524 + chr2R 15656187 intron CG42524 + chr2R_5_15655001 chr2R_15655001 CanS-SH 896 chr2R 15720706 15720786 chr2R 15720877 15720957 12 171 6.5 4.0 5.2 1.9 251 chr2R 15720706 intergenic not near genes chr2R 15720832 intergenic not near genes chr2R 15720957 intergenic not near genes chr2R_12_15720001 chr2R_15720001 CanS-SH 897 chr2R 15794801 15794869 chr2R 15794980 15795034 15 169 0.0 3.5 1.8 5.4 233 chr2R 15794801 intron,5` UTR Zasp52 -,tun + chr2R 15794918 intron,5` UTR Zasp52 -,tun + chr2R 15795034 intron,intron Zasp52 -,tun + chr2R_15_15790001 chr2R_15790001 CanS-SH 898 chr2R 15828075 15828152 chr2R 15828310 15828387 10 235 5.0 4.5 4.8 1.7 312 chr2R 15828075 intron,intron tun +,Poxn - chr2R 15828231 intron,intron tun +,Poxn - chr2R 15828387 intron,intron tun +,Poxn - chr2R_10_15825001 chr2R_15825001 CanS-SH 899 chr2R 15833467 15833538 chr2R 15833629 15833700 25 162 4.0 12.5 8.2 2.7 233 chr2R 15833467 intron,intron tun +,Poxn - chr2R 15833584 intron,intron tun +,Poxn - chr2R 15833700 intron,intron tun +,Poxn - chr2R_25_15830001 chr2R_15830001 CanS-SH 900 chr2R 15885161 15885233 chr2R 15885319 15885391 28 158 10.0 11.5 10.8 2.4 230 chr2R 15885161 intron sli - chr2R 15885276 intron sli - chr2R 15885391 exon sli - chr2R_28_15885001 chr2R_15885001 CanS-SH 901 chr2R 15891744 15891829 chr2R 15891895 15891980 27 151 7.5 8.0 7.8 3.1 236 chr2R 15891744 intron sli - chr2R 15891862 intron sli - chr2R 15891980 intron sli - chr2R_27_15890001 chr2R_15890001 CanS-SH 902 chr2R 15905483 15905556 chr2R 15905638 15905712 24 156 5.5 5.5 5.5 3.7 229 chr2R 15905483 intron sli - chr2R 15905598 intron sli - chr2R 15905712 intron sli - chr2R_24_15905001 chr2R_15905001 CanS-SH 903 chr2R 15922488 15922570 chr2R 15922722 15922798 10 233 6.0 0.0 3.0 2.5 310 chr2R 15922488 intergenic sli - chr2R 15922643 intergenic bdg - chr2R 15922798 intergenic bdg - chr2R_10_15920001 chr2R_15920001 CanS-SH 904 chr2R 15951673 15951683 chr2R 15951841 15951851 5 168 6.0 0.0 3.0 1.2 178 chr2R 15951673 intron Strn-Mlck - chr2R 15951762 intron Strn-Mlck - chr2R 15951851 intron Strn-Mlck - chr2R_5_15950001 chr2R_15950001 CanS-SH 905 chr2R 16054894 16054947 chr2R 16055052 16055105 13 158 6.5 5.5 6.0 1.9 211 chr2R 16054894 intron CG8405 + chr2R 16055000 intron CG8405 + chr2R 16055105 intron CG8405 + chr2R_13_16050001 chr2R_16050001 CanS-SH 906 chr2R 16061655 16061685 chr2R 16064366 16064396 Burdock 6 2711 12.5 5.5 9.0 0.6 2741 chr2R 16061655 intergenic not near genes chr2R 16063026 intergenic not near genes chr2R 16064396 intergenic not near genes chr2R_6_16060001 chr2R_16060001 CanS-SH 907 chr2R 16155125 16155164 chr2R 16155460 16155499 23 335 14.5 3.5 9.0 2.3 374 chr2R 16155125 intron lbk + chr2R 16155312 intron lbk + chr2R 16155499 intron lbk + chr2R_23_16155001 chr2R_16155001 CanS-SH 908 chr2R 16195960 16196036 chr2R 16196123 16196199 23 163 13.5 6.5 10.0 2.1 239 chr2R 16195960 5` UTR calypso - chr2R 16196080 5` UTR calypso - chr2R 16196199 5` UTR calypso - chr2R_23_16195001 chr2R_16195001 CanS-SH 909 chr2R 16220701 16220722 chr2R 16220856 16220877 11 155 6.0 20.0 13.0 0.8 176 chr2R 16220701 intron mrj - chr2R 16220789 intron mrj - chr2R 16220877 intron mrj - chr2R_11_16220001 chr2R_16220001 CanS-SH 910 chr2R 16245563 16245643 chr2R 16245726 16245806 25 163 7.0 7.0 7.0 3.1 243 chr2R 16245563 intron CngA - chr2R 16245684 intron CngA - chr2R 16245806 intron CngA - chr2R_25_16245001 chr2R_16245001 CanS-SH 911 chr2R 16289537 16289624 chr2R 16289706 16289793 14 169 5.0 9.0 7.0 1.8 256 chr2R 16289537 intron,exon CR43730 -,JhI-26 + chr2R 16289665 intron,intron CR43730 -,JhI-26 + chr2R 16289793 3` UTR,intron CR43730 -,JhI-26 + chr2R_14_16285001 chr2R_16285001 CanS-SH 912 chr2R 16351945 16351980 chr2R 16352168 16352203 11 223 11.0 6.5 8.8 1.1 258 chr2R 16351945 intergenic not near genes chr2R 16352074 intergenic not near genes chr2R 16352203 intergenic not near genes chr2R_11_16350001 chr2R_16350001 CanS-SH 913 chr2R 16352796 16352867 chr2R 16352954 16353025 28 158 7.5 0.0 3.8 5.8 229 chr2R 16352796 intergenic not near genes chr2R 16352910 intergenic not near genes chr2R 16353025 intergenic not near genes chr2R_28_16350001 chr2R_16350001 CanS-SH 914 chr2R 16356269 16356296 chr2R 16356420 16356447 11 151 4.5 13.5 9.0 1.1 178 chr2R 16356269 intergenic not near genes chr2R 16356358 intergenic not near genes chr2R 16356447 intergenic not near genes chr2R_11_16355001 chr2R_16355001 CanS-SH 915 chr2R 16389051 16389121 chr2R 16389204 16389274 9 153 0.5 0.0 0.2 7.5 223 chr2R 16389051 intron Sema-2b + chr2R 16389162 intron Sema-2b + chr2R 16389274 intron Sema-2b + chr2R_9_16385001 chr2R_16385001 CanS-SH 916 chr2R 16426172 16426211 chr2R 16426330 16426369 17 158 0.0 18.5 9.2 1.7 197 chr2R 16426172 intron Sema-2b + chr2R 16426270 intron Sema-2b + chr2R 16426369 intron Sema-2b + chr2R_17_16425001 chr2R_16425001 CanS-SH 917 chr2R 16457955 16457961 chr2R 16458110 16458116 4 155 14.0 0.0 7.0 0.5 161 chr2R 16457955 intergenic not near genes chr2R 16458036 intergenic not near genes chr2R 16458116 intergenic not near genes chr2R_4_16455001 chr2R_16455001 CanS-SH 918 chr2R 16465615 16465691 chr2R 16465770 16465846 24 155 13.5 4.5 9.0 2.4 231 chr2R 16465615 intergenic not near genes chr2R 16465730 intergenic not near genes chr2R 16465846 intergenic not near genes chr2R_24_16465001 chr2R_16465001 CanS-SH 919 chr2R 16546926 16546946 chr2R 16547081 16547101 5 155 10.5 0.0 5.2 0.8 175 chr2R 16546926 intergenic not near genes chr2R 16547014 intergenic not near genes chr2R 16547101 intergenic not near genes chr2R_5_16545001 chr2R_16545001 CanS-SH 920 chr2R 16617059 16617085 chr2R 16617214 16617240 11 155 5.0 10.5 7.8 1.2 181 chr2R 16617059 intron CG5065 + chr2R 16617150 intron CG5065 + chr2R 16617240 intron CG5065 + chr2R_11_16615001 chr2R_16615001 CanS-SH 921 chr2R 16652933 16652990 chr2R 16653093 16653146 14 160 0.0 7.0 3.5 3.1 213 chr2R 16652933 intergenic Amyrel -,Nach - chr2R 16653040 intergenic Nach -,Amyrel - chr2R 16653146 intergenic Nach -,Amyrel - chr2R_14_16650001 chr2R_16650001 CanS-SH 922 chr2R 16683082 16683161 chr2R 16683344 16683425 13 262 6.0 2.5 4.2 2.5 343 chr2R 16683082 intron CG30463 - chr2R 16683254 intron CG30463 - chr2R 16683425 intron CG30463 - chr2R_13_16680001 chr2R_16680001 CanS-SH 923 chr2R 16701930 16702004 chr2R 16702092 16702166 25 162 8.0 5.0 6.5 3.3 236 chr2R 16701930 intron CG30463 - chr2R 16702048 intron CG30463 - chr2R 16702166 intron CG30463 - chr2R_25_16700001 chr2R_16700001 CanS-SH 924 chr2R 16713057 16713066 chr2R 16713216 16713225 4 159 0.5 18.0 9.2 0.4 168 chr2R 16713057 intron CG30463 - chr2R 16713141 intron CG30463 - chr2R 16713225 intron CG30463 - chr2R_4_16710001 chr2R_16710001 CanS-SH 925 chr2R 16775582 16775666 chr2R 16775923 16776008 19 342 5.5 6.5 6.0 2.7 426 chr2R 16775582 3` UTR Arp53D + chr2R 16775795 intergenic Arp53D + chr2R 16776008 intergenic Arp53D + chr2R_19_16775001 chr2R_16775001 CanS-SH 926 chr2R 16787405 16787499 chr2R 16787562 16787656 15 157 9.0 11.5 10.2 1.3 251 chr2R 16787405 intron CG5522 + chr2R 16787530 intron CG5522 + chr2R 16787656 intron CG5522 + chr2R_15_16785001 chr2R_16785001 CanS-SH 927 chr2R 16808673 16808707 chr2R 16808897 16808931 16 224 16.0 3.5 9.8 1.5 258 chr2R 16808673 intergenic not near genes chr2R 16808802 intergenic not near genes chr2R 16808931 intergenic not near genes chr2R_16_16805001 chr2R_16805001 CanS-SH 928 chr2R 16880527 16880615 chr2R 16880680 16880767 19 152 9.5 7.0 8.2 2.1 240 chr2R 16880527 intron CG8910 - chr2R 16880647 intron CG8910 - chr2R 16880767 intron,5` UTR CG8910 -,CG6472 + chr2R_19_16880001 chr2R_16880001 CanS-SH 929 chr2R 16892271 16892284 chr2R 16892438 16892451 8 167 1.5 11.5 6.5 1.1 180 chr2R 16892271 intron CG8910 - chr2R 16892361 intron CG8910 - chr2R 16892451 intron CG8910 - chr2R_8_16890001 chr2R_16890001 CanS-SH 930 chr2R 16916489 16916521 chr2R 16916712 16916744 9 223 11.5 15.0 13.2 0.6 255 chr2R 16916489 intergenic not near genes chr2R 16916616 intergenic not near genes chr2R 16916744 intergenic not near genes chr2R_9_16915001 chr2R_16915001 CanS-SH 931 chr2R 16917045 16917123 chr2R 16917205 16917283 23 160 14.5 9.0 11.8 1.8 238 chr2R 16917045 intergenic not near genes chr2R 16917164 intergenic not near genes chr2R 16917283 intergenic not near genes chr2R_23_16915001 chr2R_16915001 CanS-SH 932 chr2R 16924608 16924681 chr2R 16924774 16924848 31 167 11.5 7.0 9.2 3.0 240 chr2R 16924608 intergenic Pkc53E + chr2R 16924728 5` UTR Pkc53E + chr2R 16924848 intron Pkc53E + chr2R_31_16920001 chr2R_16920001 CanS-SH 933 chr2R 16930539 16930628 chr2R 16930704 16930781 8 156 0.0 6.0 3.0 2.0 242 chr2R 16930539 intron Pkc53E + chr2R 16930660 intron Pkc53E + chr2R 16930781 intron Pkc53E + chr2R_8_16930001 chr2R_16930001 CanS-SH 934 chr2R 17075242 17075320 chr2R 17075405 17075483 25 163 12.0 9.5 10.8 2.1 241 chr2R 17075242 intron CG30460 - chr2R 17075362 intron CG30460 - chr2R 17075483 intron CG30460 - chr2R_25_17075001 chr2R_17075001 CanS-SH 935 chr2R 17078989 17079077 chr2R 17079146 17079233 18 157 7.0 5.0 6.0 2.6 244 chr2R 17078989 intron CG30460 - chr2R 17079111 intron CG30460 - chr2R 17079233 intron CG30460 - chr2R_18_17075001 chr2R_17075001 CanS-SH 936 chr2R 17098595 17098650 chr2R 17098759 17098814 25 164 17.0 15.5 16.2 1.5 219 chr2R 17098595 intergenic GstS1 - chr2R 17098704 intergenic GstS1 - chr2R 17098814 intergenic not near genes chr2R_25_17095001 chr2R_17095001 CanS-SH 937 chr2R 17099967 17099994 chr2R 17100128 17100155 8 161 0.0 12.0 6.0 1.1 188 chr2R 17099967 intergenic CG30456 + chr2R 17100061 intergenic CG30456 + chr2R 17100155 intergenic CG30456 + chr2R_8_17100001 chr2R_17100001 CanS-SH 938 chr2R 17132789 17132869 chr2R 17132964 17133044 12 175 5.5 8.0 6.8 1.5 255 chr2R 17132789 intergenic not near genes chr2R 17132916 intergenic not near genes chr2R 17133044 intergenic Acp54A1 + chr2R_12_17130001 chr2R_17130001 CanS-SH 939 chr2R 17147184 17147213 chr2R 17152289 17152319 jockey 14 5106 16.5 14.0 15.2 0.9 5135 chr2R 17147184 intergenic not near genes chr2R 17149752 intergenic not near genes chr2R 17152319 intergenic not near genes chr2R_14_17145001 chr2R_17145001 CanS-SH 940 chr2R 17161104 17161173 chr2R 17161264 17161333 23 160 8.0 6.0 7.0 2.9 229 chr2R 17161104 intergenic CG30457 - chr2R 17161218 intergenic CG30457 - chr2R 17161333 intergenic not near genes chr2R_23_17160001 chr2R_17160001 CanS-SH 941 chr2R 17176262 17176279 chr2R 17182543 17182560 diver 6 6281 5.0 7.0 6.0 0.9 6298 chr2R 17176262 intergenic not near genes chr2R 17179411 intergenic not near genes chr2R 17182560 intergenic not near genes chr2R_6_17175001 chr2R_17175001 CanS-SH 942 chr2R 17183385 17183453 chr2R 17183538 17183621 15 166 8.0 2.0 5.0 2.5 236 chr2R 17183385 intergenic not near genes chr2R 17183503 intergenic not near genes chr2R 17183621 intergenic not near genes chr2R_15_17180001 chr2R_17180001 CanS-SH 943 chr2R 17236444 17236486 chr2R 17241723 17241765 copia 12 5279 11.0 10.0 10.5 1.0 5321 chr2R 17236444 intron mbl + chr2R 17239104 intron mbl + chr2R 17241765 intron mbl + chr2R_12_17235001 chr2R_17235001 CanS-SH 944 chr2R 17268991 17269073 chr2R 17269162 17269244 23 171 8.0 6.0 7.0 2.9 253 chr2R 17268991 intron mbl + chr2R 17269118 intron mbl + chr2R 17269244 intron mbl + chr2R_23_17265001 chr2R_17265001 CanS-SH 945 chr2R 17277161 17277170 chr2R 17277644 17277653 jockey 7 483 20.0 5.5 12.8 0.5 492 chr2R 17277161 intron mbl + chr2R 17277407 intron mbl + chr2R 17277653 intron mbl + chr2R_7_17275001 chr2R_17275001 CanS-SH 946 chr2R 17395225 17395295 chr2R 17395378 17395448 22 153 12.5 10.5 11.5 1.8 223 chr2R 17395225 intron Sip1 + chr2R 17395336 intron Sip1 + chr2R 17395448 intron Sip1 + chr2R_22_17395001 chr2R_17395001 CanS-SH 947 chr2R 17485886 17485946 chr2R 17490729 17490789 F-element 10 4843 5.0 13.5 9.2 1.0 4903 chr2R 17485886 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488338 intron NT5E-2 + chr2R 17490789 intron NT5E-2 + chr2R_10_17485001 chr2R_17485001 CanS-SH 948 chr2R 17500591 17500641 chr2R 17500742 17500792 15 151 13.0 9.5 11.2 1.2 201 chr2R 17500591 intergenic not near genes chr2R 17500692 intergenic not near genes chr2R 17500792 intergenic not near genes chr2R_15_17500001 chr2R_17500001 CanS-SH 949 chr2R 17640042 17640131 chr2R 17640350 17640440 18 309 10.0 10.0 10.0 1.6 398 chr2R 17640042 intergenic not near genes chr2R 17640241 intergenic not near genes chr2R 17640440 intergenic not near genes chr2R_18_17640001 chr2R_17640001 CanS-SH 950 chr2R 17679532 17679601 chr2R 17679735 17679803 8 202 4.0 12.5 8.2 0.9 271 chr2R 17679532 intron Sema-1b - chr2R 17679668 intron Sema-1b - chr2R 17679803 intron Sema-1b - chr2R_8_17675001 chr2R_17675001 CanS-SH 951 chr2R 17709922 17710011 chr2R 17710088 17710202 14 182 5.0 0.0 2.5 4.0 280 chr2R 17709922 intron CG6424 - chr2R 17710062 intron CG6424 - chr2R 17710202 intron CG6424 - chr2R_14_17710001 chr2R_17710001 CanS-SH 952 chr2R 17782300 17782330 chr2R 17783578 17783608 pogo 11 1278 16.0 8.0 12.0 0.8 1308 chr2R 17782300 intergenic CG33981 -,fab1 - chr2R 17782954 intergenic not near genes chr2R 17783608 intergenic mir-31a - chr2R_11_17780001 chr2R_17780001 CanS-SH 953 chr2R 17783969 17783998 chr2R 17784285 17784314 pogo 7 316 15.5 9.0 12.2 0.5 345 chr2R 17783969 intergenic mir-31a - chr2R 17784142 intergenic mir-31a - chr2R 17784314 intergenic mir-31a - chr2R_7_17780001 chr2R_17780001 CanS-SH 954 chr2R 17798352 17798375 chr2R 17798906 17798926 297 8 554 7.5 14.5 11.0 0.7 574 chr2R 17798352 intron Dhit + chr2R 17798639 intron Dhit + chr2R 17798926 intron Dhit + chr2R_8_17795001 chr2R_17795001 CanS-SH 955 chr2R 17817938 17817977 chr2R 17818090 17818129 7 152 8.0 3.0 5.5 1.1 191 chr2R 17817938 intron grh + chr2R 17818034 intron grh + chr2R 17818129 intron grh + chr2R_7_17815001 chr2R_17815001 CanS-SH 956 chr2R 17821668 17821696 chr2R 17821825 17821853 9 157 8.5 6.0 7.2 1.1 185 chr2R 17821668 intron grh + chr2R 17821760 intron grh + chr2R 17821853 intron grh + chr2R_9_17820001 chr2R_17820001 CanS-SH 957 chr2R 17921403 17921458 chr2R 17921560 17921615 13 157 0.0 9.5 4.8 2.2 212 chr2R 17921403 intron Elk + chr2R 17921509 intron Elk + chr2R 17921615 intron Elk + chr2R_13_17920001 chr2R_17920001 CanS-SH 958 chr2R 18023101 18023177 chr2R 18023262 18023337 20 161 10.0 6.0 8.0 2.2 236 chr2R 18023101 intergenic not near genes chr2R 18023219 intergenic not near genes chr2R 18023337 intergenic not near genes chr2R_20_18020001 chr2R_18020001 CanS-SH 959 chr2R 18045608 18045648 chr2R 18046035 18046075 jockey 17 427 12.5 10.5 11.5 1.4 467 chr2R 18045608 intergenic not near genes chr2R 18045842 intergenic not near genes chr2R 18046075 intergenic CG5767 - chr2R_17_18045001 chr2R_18045001 CanS-SH 960 chr2R 18079350 18079357 chr2R 18084884 18084891 4 5534 7.0 5.0 6.0 0.6 5541 chr2R 18079350 intron CG34386 + chr2R 18082120 intron CG34386 + chr2R 18084891 intron CG34386 + chr2R_4_18080001 chr2R_18080001 CanS-SH 961 chr2R 18111630 18111659 chr2R 18115573 18115602 F-element 14 3943 16.0 18.0 17.0 0.8 3972 chr2R 18111630 intergenic not near genes chr2R 18113616 intergenic not near genes chr2R 18115602 intergenic not near genes chr2R_14_18110001 chr2R_18110001 CanS-SH 962 chr2R 18141809 18141860 chr2R 18141972 18142023 18 163 12.0 13.0 12.5 1.3 214 chr2R 18141809 intron pAbp + chr2R 18141916 intron pAbp + chr2R 18142023 intron pAbp + chr2R_18_18140001 chr2R_18140001 CanS-SH 963 chr2R 18190798 18190843 chr2R 18190949 18190994 15 151 11.0 7.5 9.2 1.5 196 chr2R 18190798 intron CG33958 - chr2R 18190896 intron CG33958 - chr2R 18190994 intron CG33958 - chr2R_15_18190001 chr2R_18190001 CanS-SH 964 chr2R 18241752 18241821 chr2R 18241922 18241991 31 170 8.5 6.0 7.2 3.8 239 chr2R 18241752 intergenic not near genes chr2R 18241872 intergenic not near genes chr2R 18241991 intergenic not near genes chr2R_31_18240001 chr2R_18240001 CanS-SH 965 chr2R 18308222 18308311 chr2R 18308403 18308492 21 181 9.0 2.5 5.8 3.1 270 chr2R 18308222 intron sbb - chr2R 18308357 intron sbb - chr2R 18308492 intron sbb - chr2R_21_18305001 chr2R_18305001 CanS-SH 966 chr2R 18318320 18318343 chr2R 18318476 18318499 8 156 5.5 4.0 4.8 1.4 179 chr2R 18318320 intron sbb - chr2R 18318410 intron sbb - chr2R 18318499 intron sbb - chr2R_8_18315001 chr2R_18315001 CanS-SH 967 chr2R 18320005 18320079 chr2R 18320193 18320270 10 190 6.0 0.0 3.0 2.5 265 chr2R 18320005 intron sbb - chr2R 18320138 intron sbb - chr2R 18320270 intron sbb - chr2R_10_18320001 chr2R_18320001 CanS-SH 968 chr2R 18343389 18343460 chr2R 18343547 18343618 26 158 12.0 4.0 8.0 2.9 229 chr2R 18343389 intron sbb - chr2R 18343504 intron sbb - chr2R 18343618 intron sbb - chr2R_26_18340001 chr2R_18340001 CanS-SH 969 chr2R 18358324 18358365 chr2R 18372611 18372652 roo 11 14287 18.5 9.5 14.0 0.7 14328 chr2R 18358324 intergenic not near genes chr2R 18365488 intergenic not near genes chr2R 18372652 intergenic not near genes chr2R_11_18365001 chr2R_18365001 CanS-SH 970 chr2R 18376669 18376740 chr2R 18376834 18376905 23 165 0.0 12.0 6.0 3.3 236 chr2R 18376669 intergenic not near genes chr2R 18376787 intergenic not near genes chr2R 18376905 intergenic not near genes chr2R_23_18375001 chr2R_18375001 CanS-SH 971 chr2R 18390797 18390847 chr2R 18390959 18391009 17 162 16.5 9.5 13.0 1.2 212 chr2R 18390797 intergenic CG15068 - chr2R 18390903 intergenic CG15068 - chr2R 18391009 intergenic CG15068 - chr2R_17_18390001 chr2R_18390001 CanS-SH 972 chr2R 18398677 18398682 chr2R 18402483 18402488 4 3806 29.0 17.5 23.2 0.2 3811 chr2R 18398677 exon GstE1 + chr2R 18400582 intergenic GstE3 +,GstE2 + chr2R 18402488 intergenic not near genes chr2R_4_18400001 chr2R_18400001 CanS-SH 973 chr2R 18405276 18405297 chr2R 18405427 18405448 13 151 13.5 7.5 10.5 1.1 172 chr2R 18405276 exon GstE5 + chr2R 18405362 intergenic GstE5 + chr2R 18405448 intergenic GstE5 + chr2R_13_18405001 chr2R_18405001 CanS-SH 974 chr2R 18405713 18405769 chr2R 18405868 18405924 11 155 3.0 9.5 6.2 1.5 211 chr2R 18405713 intergenic GstE6 +,GstE5 + chr2R 18405818 intergenic GstE6 +,GstE5 + chr2R 18405924 intergenic GstE6 + chr2R_11_18405001 chr2R_18405001 CanS-SH 975 chr2R 18408224 18408259 chr2R 18408420 18408455 10 196 9.5 6.0 7.8 1.1 231 chr2R 18408224 exon GstE8 + chr2R 18408340 exon GstE8 + chr2R 18408455 exon GstE8 + chr2R_10_18405001 chr2R_18405001 CanS-SH 976 chr2R 18463646 18463680 chr2R 18463822 18463856 12 176 11.0 10.0 10.5 1.0 210 chr2R 18463646 intron CG30116 - chr2R 18463751 intron CG30116 - chr2R 18463856 intron CG30116 - chr2R_12_18460001 chr2R_18460001 CanS-SH 977 chr2R 18477650 18477747 chr2R 18477814 18477905 9 163 0.0 6.5 3.2 2.1 255 chr2R 18477650 intron CG30116 - chr2R 18477778 intron CG30116 - chr2R 18477905 intron CG30116 - chr2R_9_18475001 chr2R_18475001 CanS-SH 978 chr2R 18486792 18486823 chr2R 18487129 18487160 12 337 17.5 9.0 13.2 0.8 368 chr2R 18486792 intron CG30116 - chr2R 18486976 intron CG30116 - chr2R 18487160 intron CG30116 - chr2R_12_18485001 chr2R_18485001 CanS-SH 979 chr2R 18487766 18487822 chr2R 18495292 18495348 blood 8 7526 5.5 6.5 6.0 1.1 7582 chr2R 18487766 intron CG30116 - chr2R 18491557 intron CG30116 - chr2R 18495348 intron CG30116 - chr2R_8_18490001 chr2R_18490001 CanS-SH 980 chr2R 18519882 18519970 chr2R 18520034 18520122 31 152 6.5 10.0 8.2 3.4 240 chr2R 18519882 intron CG43066 + chr2R 18520002 intron CG43066 + chr2R 18520122 intron CG43066 + chr2R_31_18520001 chr2R_18520001 CanS-SH 981 chr2R 18550520 18550588 chr2R 18550684 18550752 25 164 10.0 9.0 9.5 2.4 232 chr2R 18550520 intergenic not near genes chr2R 18550636 intergenic not near genes chr2R 18550752 intergenic not near genes chr2R_25_18550001 chr2R_18550001 CanS-SH 982 chr2R 18575726 18575761 chr2R 18581989 18582024 3S18 8 6263 9.0 7.5 8.2 0.9 6298 chr2R 18575726 intron GEFmeso - chr2R 18578875 intron GEFmeso - chr2R 18582024 intron GEFmeso - chr2R_8_18575001 chr2R_18575001 CanS-SH 983 chr2R 18590799 18590840 chr2R 18600026 18600067 roo 10 9227 5.5 9.5 7.5 1.2 9268 chr2R 18590799 intron GEFmeso - chr2R 18595433 intron GEFmeso - chr2R 18600067 intron GEFmeso - chr2R_10_18595001 chr2R_18595001 CanS-SH 984 chr2R 18675159 18675164 chr2R 18675311 18675316 5 152 0.5 14.0 7.2 0.6 157 chr2R 18675159 intergenic not near genes chr2R 18675238 intergenic not near genes chr2R 18675316 intergenic not near genes chr2R_5_18675001 chr2R_18675001 CanS-SH 985 chr2R 18692827 18692917 chr2R 18692989 18693078 20 161 5.5 2.0 3.8 4.2 251 chr2R 18692827 exon Sik3 + chr2R 18692952 intron Sik3 + chr2R 18693078 intron Sik3 + chr2R_20_18690001 chr2R_18690001 CanS-SH 986 chr2R 18732795 18732822 chr2R 18732951 18732978 8 156 7.5 7.0 7.2 1.0 183 chr2R 18732795 intron Hs3st-A + chr2R 18732886 intron Hs3st-A + chr2R 18732978 intron Hs3st-A + chr2R_8_18730001 chr2R_18730001 CanS-SH 987 chr2R 18736713 18736727 chr2R 18736914 18736928 7 201 4.5 9.5 7.0 0.9 215 chr2R 18736713 intron Hs3st-A + chr2R 18736820 intron Hs3st-A + chr2R 18736928 intron Hs3st-A + chr2R_7_18735001 chr2R_18735001 CanS-SH 988 chr2R 18747218 18747259 chr2R 18747927 18747968 10 709 9.5 5.5 7.5 1.2 750 chr2R 18747218 intron Hs3st-A + chr2R 18747593 intron Hs3st-A + chr2R 18747968 intron Hs3st-A + chr2R_10_18745001 chr2R_18745001 CanS-SH 989 chr2R 18769577 18769733 chr2R 18769913 18770015 18 324 0.0 6.5 3.2 4.3 438 chr2R 18769577 exon Mctp + chr2R 18769796 intron Mctp + chr2R 18770015 intron Mctp + chr2R_18_18765001 chr2R_18765001 CanS-SH 990 chr2R 18807993 18808057 chr2R 18808153 18808221 8 162 0.0 0.0 0.0 8.0 228 chr2R 18807993 intergenic CG15096 - chr2R 18808107 intergenic CG15096 - chr2R 18808221 intergenic CG15096 - chr2R_8_18805001 chr2R_18805001 CanS-SH 991 chr2R 18814442 18814496 chr2R 18814595 18814649 15 153 7.0 6.5 6.8 1.9 207 chr2R 18814442 intron CG15096 - chr2R 18814546 intron CG15096 - chr2R 18814649 exon CG15096 - chr2R_15_18810001 chr2R_18810001 CanS-SH 992 chr2R 18828781 18828822 chr2R 18828932 18828973 16 151 0.0 10.0 5.0 2.7 192 chr2R 18828781 intron CG15097 - chr2R 18828877 intron CG15097 - chr2R 18828973 intron CG15097 - chr2R_16_18825001 chr2R_18825001 CanS-SH 993 chr2R 18835828 18835842 chr2R 18835985 18835999 6 157 22.0 6.5 14.2 0.4 171 chr2R 18835828 intron CG15083 + chr2R 18835914 intron CG15083 + chr2R 18835999 intron CG15083 + chr2R_6_18835001 chr2R_18835001 CanS-SH 994 chr2R 18871597 18871673 chr2R 18871757 18871826 21 154 12.0 11.0 11.5 1.7 229 chr2R 18871597 intergenic not near genes chr2R 18871712 intergenic not near genes chr2R 18871826 intergenic not near genes chr2R_21_18870001 chr2R_18870001 CanS-SH 995 chr2R 18926431 18926490 chr2R 18926593 18926652 20 162 14.5 4.5 9.5 1.9 221 chr2R 18926431 intron sano + chr2R 18926542 intron sano + chr2R 18926652 intron sano + chr2R_20_18925001 chr2R_18925001 CanS-SH 996 chr2R 18930389 18930467 chr2R 18930557 18930635 11 168 10.0 5.5 7.8 1.2 246 chr2R 18930389 intron sano + chr2R 18930512 intron sano + chr2R 18930635 intron sano + chr2R_11_18930001 chr2R_18930001 CanS-SH 997 chr2R 18953100 18953173 chr2R 18953262 18953335 26 162 8.0 2.5 5.2 4.2 235 chr2R 18953100 intron sano + chr2R 18953218 intron sano + chr2R 18953335 intron sano + chr2R_26_18950001 chr2R_18950001 CanS-SH 998 chr2R 18988928 18989046 chr2R 18989095 18989198 28 156 1.0 5.0 3.0 7.0 270 chr2R 18988928 intron tn + chr2R 18989063 intron tn + chr2R 18989198 intron tn + chr2R_28_18985001 chr2R_18985001 CanS-SH 999 chr2R 18991949 18992038 chr2R 18992165 18992254 5 216 4.0 8.0 6.0 0.7 305 chr2R 18991949 intron tn + chr2R 18992102 intron tn + chr2R 18992254 intron tn + chr2R_5_18990001 chr2R_18990001 CanS-SH 1000 chr2R 19010679 19010719 chr2R 19010871 19010911 14 192 12.5 8.5 10.5 1.2 232 chr2R 19010679 intergenic not near genes chr2R 19010795 intergenic not near genes chr2R 19010911 intergenic not near genes chr2R_14_19010001 chr2R_19010001 CanS-SH 1001 chr2R 19012874 19012946 chr2R 19013043 19013115 21 169 0.5 7.0 3.8 4.4 241 chr2R 19012874 intergenic not near genes chr2R 19012994 intergenic not near genes chr2R 19013115 intergenic not near genes chr2R_21_19010001 chr2R_19010001 CanS-SH 1002 chr2R 19025977 19026027 chr2R 19026192 19026242 13 215 11.0 9.0 10.0 1.2 265 chr2R 19025977 exon 5-HT1B - chr2R 19026110 intron 5-HT1B - chr2R 19026242 intron 5-HT1B - chr2R_13_19025001 chr2R_19025001 CanS-SH 1003 chr2R 19065740 19065819 chr2R 19065898 19065977 10 158 7.5 7.0 7.2 1.2 237 chr2R 19065740 intergenic not near genes chr2R 19065858 intergenic not near genes chr2R 19065977 intergenic not near genes chr2R_10_19065001 chr2R_19065001 CanS-SH 1004 chr2R 19103364 19103428 chr2R 19103521 19103585 20 157 4.5 3.0 3.8 4.2 221 chr2R 19103364 intron 5-HT1A + chr2R 19103474 intron 5-HT1A + chr2R 19103585 intron 5-HT1A + chr2R_20_19100001 chr2R_19100001 CanS-SH 1005 chr2R 19218906 19218927 chr2R 19227538 19227559 12 8632 51.0 41.5 46.2 0.3 8653 chr2R 19218906 intron hppy + chr2R 19223232 intron hppy + chr2R 19227559 exon CG7137 + chr2R_12_19220001 chr2R_19220001 CanS-SH 1006 chr2R 19233844 19233883 chr2R 19234092 19234131 9 248 11.5 7.5 9.5 0.9 287 chr2R 19233844 intron cora + chr2R 19233988 intron cora + chr2R 19234131 intron cora + chr2R_9_19230001 chr2R_19230001 CanS-SH 1007 chr2R 19244449 19244471 chr2R 19244603 19244625 8 154 0.0 20.0 10.0 0.7 176 chr2R 19244449 intergenic not near genes chr2R 19244537 intergenic not near genes chr2R 19244625 intergenic not near genes chr2R_8_19240001 chr2R_19240001 CanS-SH 1008 chr2R 19295649 19295718 chr2R 19295805 19295874 24 156 11.5 7.5 9.5 2.3 225 chr2R 19295649 intron Tab2 + chr2R 19295762 intron Tab2 + chr2R 19295874 intron Tab2 + chr2R_24_19295001 chr2R_19295001 CanS-SH 1009 chr2R 19300917 19300979 chr2R 19301075 19301137 29 158 0.0 13.0 6.5 3.9 220 chr2R 19300917 intron Tab2 + chr2R 19301027 intron Tab2 + chr2R 19301137 intron Tab2 + chr2R_29_19300001 chr2R_19300001 CanS-SH 1010 chr2R 19362765 19362839 chr2R 19362920 19362994 26 155 9.0 10.0 9.5 2.5 229 chr2R 19362765 intergenic CG11961 + chr2R 19362880 intergenic not near genes chr2R 19362994 intergenic not near genes chr2R_26_19360001 chr2R_19360001 CanS-SH 1011 chr2R 19554949 19555000 chr2R 19555326 19555368 14 369 12.5 9.5 11.0 1.2 419 chr2R 19554949 intron sm - chr2R 19555158 intron sm - chr2R 19555368 intron sm - chr2R_14_19555001 chr2R_19555001 CanS-SH 1012 chr2R 19555529 19555597 chr2R 19555688 19555756 19 159 5.0 14.0 9.5 1.8 227 chr2R 19555529 intron sm - chr2R 19555642 intron sm - chr2R 19555756 intron sm - chr2R_19_19555001 chr2R_19555001 CanS-SH 1013 chr2R 19588686 19588770 chr2R 19588839 19588923 20 153 10.5 6.5 8.5 2.1 237 chr2R 19588686 intron sm - chr2R 19588804 intron sm - chr2R 19588923 intron sm - chr2R_20_19585001 chr2R_19585001 CanS-SH 1014 chr2R 19715798 19715832 chr2R 19723342 19723376 blood 11 7544 15.5 8.0 11.8 0.9 7578 chr2R 19715798 intergenic not near genes chr2R 19719587 intergenic not near genes chr2R 19723376 intergenic not near genes chr2R_11_19715001 chr2R_19715001 CanS-SH 1015 chr2R 19773952 19773998 chr2R 19774140 19774186 18 188 13.0 2.5 7.8 2.0 234 chr2R 19773952 intergenic not near genes chr2R 19774069 intergenic not near genes chr2R 19774186 intergenic not near genes chr2R_18_19770001 chr2R_19770001 CanS-SH 1016 chr2R 19776533 19776566 chr2R 19779930 19779964 jockey 5 3397 11.5 7.5 9.5 0.5 3431 chr2R 19776533 intergenic not near genes chr2R 19778248 intergenic not near genes chr2R 19779964 intergenic not near genes chr2R_5_19775001 chr2R_19775001 CanS-SH 1017 chr2R 19914799 19914814 chr2R 19922286 19922301 mdg1 8 7487 14.0 7.0 10.5 0.7 7502 chr2R 19914799 intergenic not near genes chr2R 19918550 intergenic not near genes chr2R 19922301 intergenic not near genes chr2R_8_19915001 chr2R_19915001 CanS-SH 1018 chr2R 19957368 19957408 chr2R 19962645 19962685 copia 14 5277 11.5 8.0 9.8 1.3 5317 chr2R 19957368 intergenic CG44623 + chr2R 19960026 intergenic not near genes chr2R 19962685 intergenic not near genes chr2R_14_19960001 chr2R_19960001 CanS-SH 1019 chr2R 20069146 20069254 chr2R 20071872 20071966 opus 4 2716 0.0 5.5 2.8 1.1 2820 chr2R 20069146 intergenic not near genes chr2R 20070556 intergenic not near genes chr2R 20071966 intergenic not near genes chr2R_4_20070001 chr2R_20070001 CanS-SH 1020 chr2R 20080599 20080622 chr2R 20080751 20080774 11 152 2.0 23.5 12.8 0.8 175 chr2R 20080599 intergenic not near genes chr2R 20080686 intergenic not near genes chr2R 20080774 intergenic not near genes chr2R_11_20080001 chr2R_20080001 CanS-SH 1021 chr2R 20084507 20084520 chr2R 20084674 20084687 4 167 9.0 6.5 7.8 0.5 180 chr2R 20084507 intergenic CR44632 + chr2R 20084597 intergenic CR44632 + chr2R 20084687 intergenic CR44632 + chr2R_4_20080001 chr2R_20080001 CanS-SH 1022 chr2R 20127132 20127169 chr2R 20127343 20127380 16 211 13.0 7.0 10.0 1.5 248 chr2R 20127132 intergenic not near genes chr2R 20127256 intergenic not near genes chr2R 20127380 intergenic not near genes chr2R_16_20125001 chr2R_20125001 CanS-SH 1023 chr2R 20338694 20338790 chr2R 20338849 20338944 9 155 6.5 0.0 3.2 2.1 250 chr2R 20338694 intergenic not near genes chr2R 20338819 intergenic not near genes chr2R 20338944 intergenic not near genes chr2R_9_20335001 chr2R_20335001 CanS-SH 1024 chr2R 20368455 20368491 chr2R 20377693 20377729 roo 9 9238 14.0 15.5 14.8 0.6 9274 chr2R 20368455 intergenic not near genes chr2R 20373092 intergenic not near genes chr2R 20377729 intergenic not near genes chr2R_9_20370001 chr2R_20370001 CanS-SH 1025 chr2R 20502220 20502306 chr2R 20502406 20502495 7 189 6.0 7.0 6.5 0.9 275 chr2R 20502220 intergenic not near genes chr2R 20502358 intergenic not near genes chr2R 20502495 intergenic not near genes chr2R_7_20500001 chr2R_20500001 CanS-SH 1026 chr2R 20510264 20510360 chr2R 20510663 20510759 16 399 8.5 4.5 6.5 2.1 495 chr2R 20510264 intergenic not near genes chr2R 20510512 intergenic not near genes chr2R 20510759 intergenic CR44648 + chr2R_16_20510001 chr2R_20510001 CanS-SH 1027 chr2R 20522979 20523020 chr2R 20523165 20523206 12 186 14.5 10.0 12.2 0.9 227 chr2R 20522979 intergenic not near genes chr2R 20523092 intergenic not near genes chr2R 20523206 intergenic not near genes chr2R_12_20520001 chr2R_20520001 CanS-SH 1028 chr2R 20555257 20555312 chr2R 20555416 20555471 12 159 12.5 7.5 10.0 1.1 214 chr2R 20555257 intergenic not near genes chr2R 20555364 intergenic not near genes chr2R 20555471 intergenic not near genes chr2R_12_20555001 chr2R_20555001 CanS-SH 1029 chr2R 20572507 20572587 chr2R 20572672 20572752 35 165 6.0 8.0 7.0 4.4 245 chr2R 20572507 intron qsm - chr2R 20572630 intron qsm - chr2R 20572752 intron qsm - chr2R_35_20570001 chr2R_20570001 CanS-SH 1030 chr2R 20590591 20590669 chr2R 20590745 20590823 23 154 9.0 8.0 8.5 2.4 232 chr2R 20590591 intron bl + chr2R 20590707 intron bl + chr2R 20590823 intron bl + chr2R_23_20590001 chr2R_20590001 CanS-SH 1031 chr2R 20667311 20667332 chr2R 20667498 20667519 5 187 13.0 18.5 15.8 0.3 208 chr2R 20667311 intergenic Fem-1 -,exu - chr2R 20667415 intergenic exu -,Fem-1 - chr2R 20667519 3` UTR exu - chr2R_5_20665001 chr2R_20665001 CanS-SH 1032 chr2R 20707321 20707365 chr2R 20707484 20707528 12 163 6.5 10.0 8.2 1.3 207 chr2R 20707321 intron dpr + chr2R 20707424 intron dpr + chr2R 20707528 intron dpr + chr2R_12_20705001 chr2R_20705001 CanS-SH 1033 chr2R 20723597 20723633 chr2R 20723824 20723860 10 227 11.5 7.0 9.2 1.0 263 chr2R 20723597 intron dpr + chr2R 20723728 intron dpr + chr2R 20723860 intron dpr + chr2R_10_20720001 chr2R_20720001 CanS-SH 1034 chr2R 20739378 20739416 chr2R 20744221 20744259 F-element 13 4843 12.5 8.0 10.2 1.2 4881 chr2R 20739378 intron dpr + chr2R 20741818 intron dpr + chr2R 20744259 intron dpr + chr2R_13_20740001 chr2R_20740001 CanS-SH 1035 chr2R 20757411 20757447 chr2R 20757563 20757599 9 152 6.0 11.5 8.8 0.9 188 chr2R 20757411 intergenic not near genes chr2R 20757505 intergenic not near genes chr2R 20757599 intergenic not near genes chr2R_9_20755001 chr2R_20755001 CanS-SH 1036 chr2R 20776484 20776513 chr2R 20776636 20776665 12 152 13.5 0.0 6.8 1.5 181 chr2R 20776484 intergenic CG43709 -,CG43710 - chr2R 20776574 intergenic CG43710 -,CG43709 - chr2R 20776665 intergenic CG43710 -,CG43709 - chr2R_12_20775001 chr2R_20775001 CanS-SH 1037 chr2R 20783239 20783273 chr2R 20788086 20788120 F-element 9 4847 15.0 7.5 11.2 0.7 4881 chr2R 20783239 intergenic not near genes chr2R 20785680 intergenic not near genes chr2R 20788120 intergenic CG43666 - chr2R_9_20785001 chr2R_20785001 CanS-SH 1038 chr2R 20912290 20912355 chr2R 20912450 20912515 12 160 5.0 13.5 9.2 1.2 225 chr2R 20912290 intergenic not near genes chr2R 20912402 intergenic not near genes chr2R 20912515 intergenic not near genes chr2R_12_20910001 chr2R_20910001 CanS-SH 1039 chr2R 20927654 20927745 chr2R 20927808 20927898 21 153 9.0 7.5 8.2 2.3 244 chr2R 20927654 intron Rx + chr2R 20927776 intron Rx + chr2R 20927898 intron Rx + chr2R_21_20925001 chr2R_20925001 CanS-SH 1040 chr2R 20931209 20931268 chr2R 20931385 20931444 28 176 12.0 5.5 8.8 2.9 235 chr2R 20931209 intron Rx + chr2R 20931326 intron Rx + chr2R 20931444 intron Rx + chr2R_28_20930001 chr2R_20930001 CanS-SH 1041 chr2R 20962851 20962899 chr2R 20963024 20963072 22 173 15.5 9.0 12.2 1.7 221 chr2R 20962851 intergenic not near genes chr2R 20962962 intergenic not near genes chr2R 20963072 intergenic not near genes chr2R_22_20960001 chr2R_20960001 CanS-SH 1042 chr2R 20966959 20967029 chr2R 20967111 20967181 13 152 12.0 1.0 6.5 1.7 222 chr2R 20966959 intergenic not near genes chr2R 20967070 intergenic not near genes chr2R 20967181 intergenic not near genes chr2R_13_20965001 chr2R_20965001 CanS-SH 1043 chr2R 21106038 21106050 chr2R 21106196 21106208 8 158 8.5 4.5 6.5 1.1 170 chr2R 21106038 intron ktub + chr2R 21106123 intron ktub + chr2R 21106208 intron ktub + chr2R_8_21105001 chr2R_21105001 CanS-SH 1044 chr2R 21136829 21136917 chr2R 21136988 21137076 18 159 5.0 5.0 5.0 3.0 247 chr2R 21136829 intron Magi - chr2R 21136952 intron Magi - chr2R 21137076 intron Magi - chr2R_18_21135001 chr2R_21135001 CanS-SH 1045 chr2R 21151071 21151145 chr2R 21153758 21153853 opus 5 2695 0.0 8.5 4.2 1.0 2782 chr2R 21151071 exon CG30389 - chr2R 21152462 intron CG30389 - chr2R 21153853 intron CG30389 - chr2R_5_21150001 chr2R_21150001 CanS-SH 1046 chr2R 21193942 21194015 chr2R 21194102 21194175 25 160 1.5 12.0 6.8 3.2 233 chr2R 21193942 intron Lapsyn + chr2R 21194058 intron Lapsyn + chr2R 21194175 intron Lapsyn + chr2R_25_21190001 chr2R_21190001 CanS-SH 1047 chr2R 21247442 21247523 chr2R 21247999 21248079 13 557 5.0 7.0 6.0 1.9 637 chr2R 21247442 intron ASPP - chr2R 21247760 intron ASPP - chr2R 21248079 intron ASPP - chr2R_13_21245001 chr2R_21245001 CanS-SH 1048 chr2R 21251756 21251798 chr2R 21252058 21252100 9 302 13.0 7.5 10.2 0.8 344 chr2R 21251756 intergenic not near genes chr2R 21251928 intergenic not near genes chr2R 21252100 intergenic not near genes chr2R_9_21250001 chr2R_21250001 CanS-SH 1049 chr2R 21322889 21322933 chr2R 21323048 21323092 15 159 13.5 12.5 13.0 1.1 203 chr2R 21322889 5` UTR CG30394 - chr2R 21322990 5` UTR CG30394 - chr2R 21323092 intron CG30394 - chr2R_15_21320001 chr2R_21320001 CanS-SH 1050 chr2R 21352488 21352525 chr2R 21352674 21352711 8 186 13.5 6.5 10.0 0.7 223 chr2R 21352488 intergenic not near genes chr2R 21352600 intergenic not near genes chr2R 21352711 intergenic not near genes chr2R_8_21350001 chr2R_21350001 CanS-SH 1051 chr2R 21363113 21363184 chr2R 21363286 21363348 20 170 0.5 11.5 6.0 2.9 235 chr2R 21363113 intron cv-2 - chr2R 21363230 intron cv-2 - chr2R 21363348 intron cv-2 - chr2R_20_21360001 chr2R_21360001 CanS-SH 1052 chr2R 21365751 21365757 chr2R 21365912 21365918 7 161 16.0 0.0 8.0 0.8 167 chr2R 21365751 intron cv-2 - chr2R 21365834 intron cv-2 - chr2R 21365918 intron cv-2 - chr2R_7_21365001 chr2R_21365001 CanS-SH 1053 chr2R 21380136 21380206 chr2R 21380369 21380440 5 234 7.0 9.5 8.2 0.5 304 chr2R 21380136 intergenic not near genes chr2R 21380288 intergenic not near genes chr2R 21380440 intergenic not near genes chr2R_5_21380001 chr2R_21380001 CanS-SH 1054 chr2R 21433625 21433650 chr2R 21434118 21434143 7 493 21.5 10.5 16.0 0.4 518 chr2R 21433625 intron Sdc - chr2R 21433884 intron Sdc - chr2R 21434143 intron Sdc - chr2R_7_21430001 chr2R_21430001 CanS-SH 1055 chr2R 21470466 21470549 chr2R 21470844 21470927 8 378 15.5 15.5 15.5 0.5 461 chr2R 21470466 intron Sdc - chr2R 21470696 intron Sdc - chr2R 21470927 intron Sdc - chr2R_8_21470001 chr2R_21470001 CanS-SH 1056 chr2R 21490061 21490084 chr2R 21490218 21490241 5 157 22.0 13.5 17.8 0.3 180 chr2R 21490061 intron Fkbp14 - chr2R 21490151 intron Fkbp14 - chr2R 21490241 intron Fkbp14 - chr2R_5_21490001 chr2R_21490001 CanS-SH 1057 chr2R 21505702 21505769 chr2R 21505858 21505925 12 156 31.5 26.0 28.8 0.4 223 chr2R 21505702 intron MESK2 + chr2R 21505814 intron MESK2 + chr2R 21505925 intron MESK2 + chr2R_12_21505001 chr2R_21505001 CanS-SH 1058 chr2R 21578857 21578870 chr2R 21579009 21579022 4 152 22.0 11.5 16.8 0.2 165 chr2R 21578857 intergenic not near genes chr2R 21578940 intergenic not near genes chr2R 21579022 intergenic not near genes chr2R_4_21575001 chr2R_21575001 CanS-SH 1059 chr2R 21591776 21591851 chr2R 21591933 21592008 17 157 10.5 16.0 13.2 1.2 232 chr2R 21591776 intergenic CG33225 + chr2R 21591892 intergenic CG33225 + chr2R 21592008 intergenic CG33225 + chr2R_17_21590001 chr2R_21590001 CanS-SH 1060 chr2R 21592795 21592841 chr2R 21592953 21592999 6 158 8.5 6.0 7.2 0.7 204 chr2R 21592795 intergenic not near genes chr2R 21592897 intergenic not near genes chr2R 21592999 intergenic not near genes chr2R_6_21590001 chr2R_21590001 CanS-SH 1061 chr2R 21598911 21598943 chr2R 21599146 21599178 4 235 21.5 20.0 20.8 0.2 267 chr2R 21598911 intergenic not near genes chr2R 21599044 intergenic not near genes chr2R 21599178 intergenic not near genes chr2R_4_21595001 chr2R_21595001 CanS-SH 1062 chr2R 21660339 21660415 chr2R 21660673 21660749 9 334 12.0 8.5 10.2 0.8 410 chr2R 21660339 intergenic Rae1 - chr2R 21660544 intergenic pirk - chr2R 21660749 intergenic pirk - chr2R_9_21660001 chr2R_21660001 CanS-SH 1063 chr2R 21700093 21700171 chr2R 21700254 21700332 17 161 8.0 12.0 10.0 1.5 239 chr2R 21700093 intron HmgZ - chr2R 21700212 intron HmgZ - chr2R 21700332 intron HmgZ - chr2R_17_21700001 chr2R_21700001 CanS-SH 1064 chr2R 21738215 21738254 chr2R 21747450 21747488 roo 10 9235 8.5 8.0 8.2 1.1 9273 chr2R 21738215 intergenic not near genes chr2R 21742852 intergenic not near genes chr2R 21747488 intergenic not near genes chr2R_10_21740001 chr2R_21740001 CanS-SH 1065 chr2R 21753020 21753059 chr2R 21753580 21753619 roo 16 560 10.5 7.5 9.0 1.6 599 chr2R 21753020 intergenic not near genes chr2R 21753320 intergenic not near genes chr2R 21753619 intergenic not near genes chr2R_16_21750001 chr2R_21750001 CanS-SH 1066 chr2R 21783509 21783565 chr2R 21783661 21783717 10 152 8.5 4.0 6.2 1.4 208 chr2R 21783509 intergenic not near genes chr2R 21783613 intergenic not near genes chr2R 21783717 intergenic not near genes chr2R_10_21780001 chr2R_21780001 CanS-SH 1067 chr2R 21802354 21802448 chr2R 21802520 21802614 7 166 3.5 5.5 4.5 1.3 260 chr2R 21802354 intergenic not near genes chr2R 21802484 intergenic not near genes chr2R 21802614 intergenic not near genes chr2R_7_21800001 chr2R_21800001 CanS-SH 1068 chr2R 21809466 21809502 chr2R 21817781 21817817 roo 10 8315 22.0 14.0 18.0 0.5 8351 chr2R 21809466 intergenic not near genes chr2R 21813642 intergenic not near genes chr2R 21817817 intergenic not near genes chr2R_10_21810001 chr2R_21810001 CanS-SH 1069 chr2R 21842926 21842931 chr2R 21843080 21843085 5 154 13.5 2.5 8.0 0.6 159 chr2R 21842926 intergenic not near genes chr2R 21843006 intergenic not near genes chr2R 21843085 intergenic not near genes chr2R_5_21840001 chr2R_21840001 CanS-SH 1070 chr2R 21844016 21844118 chr2R 21844173 21844273 11 156 8.5 7.0 7.8 1.2 257 chr2R 21844016 intergenic not near genes chr2R 21844144 intergenic not near genes chr2R 21844273 intergenic not near genes chr2R_11_21840001 chr2R_21840001 CanS-SH 1071 chr2R 21857275 21857365 chr2R 21857441 21857531 25 166 5.5 10.5 8.0 2.8 256 chr2R 21857275 intergenic not near genes chr2R 21857403 intergenic not near genes chr2R 21857531 intergenic not near genes chr2R_25_21855001 chr2R_21855001 CanS-SH 1072 chr2R 21858906 21858949 chr2R 21859059 21859102 5 153 28.0 23.5 25.8 0.2 196 chr2R 21858906 intergenic not near genes chr2R 21859004 intergenic not near genes chr2R 21859102 intergenic not near genes chr2R_5_21855001 chr2R_21855001 CanS-SH 1073 chr2R 21870887 21870970 chr2R 21871041 21871124 9 154 1.5 10.0 5.8 1.3 237 chr2R 21870887 intergenic not near genes chr2R 21871006 intergenic not near genes chr2R 21871124 intergenic not near genes chr2R_9_21870001 chr2R_21870001 CanS-SH 1074 chr2R 21886118 21886167 chr2R 21886293 21886342 4 175 21.0 23.5 22.2 0.2 224 chr2R 21886118 intron Fili + chr2R 21886230 intron Fili + chr2R 21886342 intron Fili + chr2R_4_21885001 chr2R_21885001 CanS-SH 1075 chr2R 21888240 21888313 chr2R 21888406 21888485 13 169 5.0 11.0 8.0 1.4 245 chr2R 21888240 intron Fili + chr2R 21888362 intron Fili + chr2R 21888485 intron Fili + chr2R_13_21885001 chr2R_21885001 CanS-SH 1076 chr2R 21889540 21889589 chr2R 21889708 21889757 5 168 5.0 11.5 8.2 0.5 217 chr2R 21889540 intron Fili + chr2R 21889648 intron Fili + chr2R 21889757 intron Fili + chr2R_5_21885001 chr2R_21885001 CanS-SH 1077 chr2R 21906211 21906299 chr2R 21906387 21906475 10 176 7.0 9.5 8.2 1.1 264 chr2R 21906211 intron Fili + chr2R 21906343 intron Fili + chr2R 21906475 intron Fili + chr2R_10_21905001 chr2R_21905001 CanS-SH 1078 chr2R 21911773 21911828 chr2R 21911955 21912010 4 182 25.5 21.0 23.2 0.2 237 chr2R 21911773 intron Fili + chr2R 21911892 intron Fili + chr2R 21912010 intron Fili + chr2R_4_21910001 chr2R_21910001 CanS-SH 1079 chr2R 21963134 21963215 chr2R 21963294 21963375 13 160 5.5 10.0 7.8 1.5 241 chr2R 21963134 intergenic not near genes chr2R 21963254 intergenic not near genes chr2R 21963375 intergenic not near genes chr2R_13_21960001 chr2R_21960001 CanS-SH 1080 chr2R 21985466 21985540 chr2R 21985621 21985702 4 157 18.0 12.5 15.2 0.2 236 chr2R 21985466 intergenic CG30401 - chr2R 21985584 intergenic CG30401 - chr2R 21985702 3` UTR CG30401 - chr2R_4_21985001 chr2R_21985001 CanS-SH 1081 chr2R 22003027 22003085 chr2R 22003188 22003246 22 161 14.0 0.0 7.0 2.8 219 chr2R 22003027 intron CG34370 - chr2R 22003136 intron CG34370 - chr2R 22003246 intron CG34370 - chr2R_22_22000001 chr2R_22000001 CanS-SH 1082 chr2R 22004226 22004319 chr2R 22004395 22004488 5 169 15.5 15.0 15.2 0.3 262 chr2R 22004226 intron CG34370 - chr2R 22004357 intron CG34370 - chr2R 22004488 intron CG34370 - chr2R_5_22000001 chr2R_22000001 CanS-SH 1083 chr2R 22029454 22029532 chr2R 22029606 22029684 21 152 6.0 0.0 3.0 5.2 230 chr2R 22029454 intron CG34370 - chr2R 22029569 intron CG34370 - chr2R 22029684 intron CG34370 - chr2R_21_22025001 chr2R_22025001 CanS-SH 1084 chr2R 22033755 22033833 chr2R 22033915 22033994 22 160 9.0 7.0 8.0 2.4 239 chr2R 22033755 intron CG34370 - chr2R 22033874 intron CG34370 - chr2R 22033994 intron CG34370 - chr2R_22_22030001 chr2R_22030001 CanS-SH 1085 chr2R 22037090 22037117 chr2R 22037258 22037286 9 168 7.0 5.0 6.0 1.3 196 chr2R 22037090 intron CG34370 - chr2R 22037188 intron CG34370 - chr2R 22037286 intron CG34370 - chr2R_9_22035001 chr2R_22035001 CanS-SH 1086 chr2R 22040089 22040172 chr2R 22040245 22040328 22 156 4.0 5.5 4.8 3.8 239 chr2R 22040089 intergenic not near genes chr2R 22040208 intergenic not near genes chr2R 22040328 intergenic not near genes chr2R_22_22040001 chr2R_22040001 CanS-SH 1087 chr2R 22047924 22047962 chr2R 22048127 22048165 17 203 13.5 9.0 11.2 1.4 241 chr2R 22047924 intergenic not near genes chr2R 22048044 intergenic not near genes chr2R 22048165 intergenic not near genes chr2R_17_22045001 chr2R_22045001 CanS-SH 1088 chr2R 22091806 22091869 chr2R 22091964 22092027 22 158 8.0 8.0 8.0 2.4 221 chr2R 22091806 exon CG11073 - chr2R 22091916 exon CG11073 - chr2R 22092027 exon CG11073 - chr2R_22_22090001 chr2R_22090001 CanS-SH 1089 chr2R 22099818 22099880 chr2R 22099974 22100036 16 156 0.0 8.5 4.2 3.1 218 chr2R 22099818 intergenic CG11073 - chr2R 22099927 intergenic CG11073 - chr2R 22100036 intergenic not near genes chr2R_16_22095001 chr2R_22095001 CanS-SH 1090 chr2R 22102049 22102138 chr2R 22102212 22102301 23 163 7.0 10.0 8.5 2.4 252 chr2R 22102049 intergenic not near genes chr2R 22102175 intergenic not near genes chr2R 22102301 intergenic not near genes chr2R_23_22100001 chr2R_22100001 CanS-SH 1091 chr2R 22182836 22182935 chr2R 22182995 22183094 28 159 5.0 6.0 5.5 4.3 258 chr2R 22182836 5` UTR CG11170 - chr2R 22182965 intergenic CG11170 -,MED16 +,CG11275 + chr2R 22183094 intergenic MED16 +,CG11170 -,CG11275 + chr2R_28_22180001 chr2R_22180001 CanS-SH 1092 chr2R 22205792 22205880 chr2R 22205959 22206047 20 167 6.0 7.5 6.8 2.6 255 chr2R 22205792 intergenic CG3292 -,CG3290 - chr2R 22205920 intergenic CG3290 -,CG3292 - chr2R 22206047 3` UTR CG3290 - chr2R_20_22205001 chr2R_22205001 CanS-SH 1093 chr2R 22297706 22297724 chr2R 22297857 22297874 10 151 0.0 17.0 8.5 1.1 168 chr2R 22297706 intergenic not near genes chr2R 22297790 intergenic wdp - chr2R 22297874 intergenic wdp - chr2R_10_22295001 chr2R_22295001 CanS-SH 1094 chr2R 22349630 22349669 chr2R 22351489 22351528 jockey 9 1859 12.0 13.5 12.8 0.7 1898 chr2R 22349630 intron Liprin-gamma - chr2R 22350579 intron Liprin-gamma - chr2R 22351528 intron Liprin-gamma - chr2R_9_22350001 chr2R_22350001 CanS-SH 1095 chr2R 22374562 22374637 chr2R 22374724 22374799 15 162 10.5 10.0 10.2 1.3 237 chr2R 22374562 3` UTR CR44759 - chr2R 22374680 3` UTR CR44759 - chr2R 22374799 3` UTR CR44759 - chr2R_15_22370001 chr2R_22370001 CanS-SH 1096 chr2R 22377745 22377814 chr2R 22377906 22377973 13 160 10.5 7.5 9.0 1.3 228 chr2R 22377745 exon Rtf1 + chr2R 22377859 3` UTR Rtf1 + chr2R 22377973 3` UTR Rtf1 + chr2R_13_22375001 chr2R_22375001 CanS-SH 1097 chr2R 22380326 22380355 chr2R 22380492 22380521 4 166 25.5 20.0 22.8 0.2 195 chr2R 22380326 intron wrapper + chr2R 22380424 intron wrapper + chr2R 22380521 intron wrapper + chr2R_4_22380001 chr2R_22380001 CanS-SH 1098 chr2R 22453157 22453214 chr2R 22453315 22453392 5 166 0.0 8.5 4.2 1.0 235 chr2R 22453157 intergenic not near genes chr2R 22453274 intergenic not near genes chr2R 22453392 intergenic not near genes chr2R_5_22450001 chr2R_22450001 CanS-SH 1099 chr2R 22460306 22460392 chr2R 22460460 22460546 14 154 17.5 21.0 19.2 0.7 240 chr2R 22460306 intron CG10384 + chr2R 22460426 intron CG10384 + chr2R 22460546 intron CG10384 + chr2R_14_22460001 chr2R_22460001 CanS-SH 1100 chr2R 22465258 22465276 chr2R 22465526 22465544 BS 4 268 27.0 10.5 18.8 0.2 286 chr2R 22465258 intron CG10384 + chr2R 22465401 intron CG10384 + chr2R 22465544 intron CG10384 + chr2R_4_22465001 chr2R_22465001 CanS-SH 1101 chr2R 22477515 22477557 chr2R 22477695 22477737 6 180 30.0 25.5 27.8 0.2 222 chr2R 22477515 intergenic CG45063 - chr2R 22477626 intergenic CG45063 - chr2R 22477737 intergenic CG45063 - chr2R_6_22475001 chr2R_22475001 CanS-SH 1102 chr2R 22503805 22503863 chr2R 22503975 22504033 7 170 20.0 20.5 20.2 0.3 228 chr2R 22503805 intron px - chr2R 22503919 intron px - chr2R 22504033 intron px - chr2R_7_22500001 chr2R_22500001 CanS-SH 1103 chr2R 22525691 22525717 chr2R 22529321 22529347 jockey 7 3630 15.0 5.0 10.0 0.6 3656 chr2R 22525691 intron px - chr2R 22527519 intron px - chr2R 22529347 intron px - chr2R_7_22525001 chr2R_22525001 CanS-SH 1104 chr2R 22572496 22572534 chr2R 22572744 22572780 8 248 14.5 18.5 16.5 0.5 284 chr2R 22572496 intron dnr1 - chr2R 22572638 intron dnr1 - chr2R 22572780 intron dnr1 - chr2R_8_22570001 chr2R_22570001 CanS-SH 1105 chr2R 22580362 22580442 chr2R 22586581 22586661 diver 22 6219 7.0 5.5 6.2 3.1 6299 chr2R 22580362 intron dnr1 - chr2R 22583512 intron dnr1 - chr2R 22586661 intron dnr1 - chr2R_22_22580001 chr2R_22580001 CanS-SH 1106 chr2R 22588096 22588144 chr2R 22588266 22588314 17 170 5.0 16.5 10.8 1.4 218 chr2R 22588096 intron dnr1 - chr2R 22588205 intron dnr1 - chr2R 22588314 intron dnr1 - chr2R_17_22585001 chr2R_22585001 CanS-SH 1107 chr2R 22620759 22620846 chr2R 22620934 22621021 15 175 15.0 16.5 15.8 0.9 262 chr2R 22620759 5` UTR CG33143 + chr2R 22620890 5` UTR CG33143 + chr2R 22621021 5` UTR CG33143 + chr2R_15_22620001 chr2R_22620001 CanS-SH 1108 chr2R 22623403 22623410 chr2R 22623618 22623625 4 215 3.0 21.0 12.0 0.3 222 chr2R 22623403 intron CG33143 + chr2R 22623514 intron CG33143 + chr2R 22623625 intron CG33143 + chr2R_4_22620001 chr2R_22620001 CanS-SH 1109 chr2R 22623733 22623807 chr2R 22623903 22623977 13 170 13.5 8.0 10.8 1.1 244 chr2R 22623733 intron CG33143 + chr2R 22623855 intron CG33143 + chr2R 22623977 intron CG33143 + chr2R_13_22620001 chr2R_22620001 CanS-SH 1110 chr2R 22662189 22662266 chr2R 22662365 22662442 9 176 16.5 15.0 15.8 0.5 253 chr2R 22662189 intron CG42566 + chr2R 22662316 intron CG42566 + chr2R 22662442 intron CG42566 + chr2R_9_22660001 chr2R_22660001 CanS-SH 1111 chr2R 22729387 22729468 chr2R 22729670 22729751 INE-1 17 283 6.0 7.0 6.5 2.3 364 chr2R 22729387 intron jbug - chr2R 22729569 intron jbug - chr2R 22729751 intron jbug - chr2R_17_22725001 chr2R_22725001 CanS-SH 1112 chr2R 22774900 22774942 chr2R 22775394 22775436 jockey 22 494 17.5 8.5 13.0 1.6 536 chr2R 22774900 intron CG42260 - chr2R 22775168 intron CG42260 - chr2R 22775436 intron CG42260 - chr2R_22_22775001 chr2R_22775001 CanS-SH 1113 chr2R 22780581 22780669 chr2R 22780762 22780850 25 181 12.5 7.0 9.8 2.3 269 chr2R 22780581 intron CG42260 - chr2R 22780716 intron CG42260 - chr2R 22780850 intron CG42260 - chr2R_25_22780001 chr2R_22780001 CanS-SH 1114 chr2R 22787526 22787589 chr2R 22787732 22787797 10 208 5.0 6.0 5.5 1.5 271 chr2R 22787526 intron CG42260 - chr2R 22787662 intron CG42260 - chr2R 22787797 intron CG42260 - chr2R_10_22785001 chr2R_22785001 CanS-SH 1115 chr2R 22789054 22789074 chr2R 22789250 22789270 5 196 20.0 24.0 22.0 0.2 216 chr2R 22789054 intron CG42260 - chr2R 22789162 intron CG42260 - chr2R 22789270 intron CG42260 - chr2R_5_22785001 chr2R_22785001 CanS-SH 1116 chr2R 22833224 22833252 chr2R 22833532 22833560 4 308 24.0 17.0 20.5 0.2 336 chr2R 22833224 exon CG30265 + chr2R 22833392 exon CG30265 + chr2R 22833560 exon CG30265 + chr2R_4_22830001 chr2R_22830001 CanS-SH 1117 chr2R 22834719 22834750 chr2R 22834907 22834938 4 188 17.0 10.5 13.8 0.3 219 chr2R 22834719 exon CG12490 + chr2R 22834828 intron CG12490 + chr2R 22834938 intron CG12490 + chr2R_4_22830001 chr2R_22830001 CanS-SH 1118 chr2R 22842969 22843003 chr2R 22845006 22845040 flea 13 2037 16.0 13.0 14.5 0.8 2071 chr2R 22842969 3` UTR CG9826 + chr2R 22844004 intergenic not near genes chr2R 22845040 intergenic not near genes chr2R_13_22840001 chr2R_22840001 CanS-SH 1119 chr2R 22868192 22868234 chr2R 22868380 22868422 6 188 29.5 20.0 24.8 0.2 230 chr2R 22868192 5` UTR fd59A + chr2R 22868307 5` UTR fd59A + chr2R 22868422 5` UTR fd59A + chr2R_6_22865001 chr2R_22865001 CanS-SH 1120 chr2R 22908358 22908378 chr2R 22908553 22908573 6 195 12.0 11.0 11.5 0.5 215 chr2R 22908358 intron nahoda + chr2R 22908466 intron nahoda + chr2R 22908573 intron nahoda + chr2R_6_22905001 chr2R_22905001 CanS-SH 1121 chr2R 22944992 22945040 chr2R 22945181 22945229 13 189 22.5 23.5 23.0 0.5 237 chr2R 22944992 exon CG42694 + chr2R 22945110 3` UTR CG42694 + chr2R 22945229 intergenic CG42694 + chr2R_13_22945001 chr2R_22945001 CanS-SH 1122 chr2R 22956978 22957047 chr2R 22957132 22957201 20 154 23.0 20.0 21.5 0.9 223 chr2R 22956978 intergenic CR44780 - chr2R 22957090 intergenic CR44780 - chr2R 22957201 3` UTR CR44780 - chr2R_20_22955001 chr2R_22955001 CanS-SH 1123 chr2R 22958729 22958762 chr2R 22963891 22963924 flea 9 5162 10.5 6.5 8.5 0.9 5195 chr2R 22958729 intergenic not near genes chr2R 22961326 intergenic not near genes chr2R 22963924 intergenic not near genes chr2R_9_22960001 chr2R_22960001 CanS-SH 1124 chr2R 22988240 22988307 chr2R 22988396 22988463 14 156 18.5 16.5 17.5 0.8 223 chr2R 22988240 intron twi + chr2R 22988352 intron twi + chr2R 22988463 intron twi + chr2R_14_22985001 chr2R_22985001 CanS-SH 1125 chr2R 22991564 22991652 chr2R 22991731 22991820 12 167 23.5 19.5 21.5 0.5 256 chr2R 22991564 intron twi + chr2R 22991692 intron twi + chr2R 22991820 intron twi + chr2R_12_22990001 chr2R_22990001 CanS-SH 1126 chr2R 23045278 23045310 chr2R 23045567 23045599 4 289 19.0 10.0 14.5 0.3 321 chr2R 23045278 intron twi + chr2R 23045438 intron twi + chr2R 23045599 intron twi + chr2R_4_23045001 chr2R_23045001 CanS-SH 1127 chr2R 23061663 23061711 chr2R 23061870 23061903 8 194 11.5 8.5 10.0 0.7 240 chr2R 23061663 intron l(2)06496 - chr2R 23061783 3` UTR l(2)06496 - chr2R 23061903 3` UTR l(2)06496 - chr2R_8_23060001 chr2R_23060001 CanS-SH 1128 chr2R 23065043 23065109 chr2R 23065510 23065576 5 467 25.5 19.0 22.2 0.2 533 chr2R 23065043 exon PPO3 + chr2R 23065310 exon PPO3 + chr2R 23065576 exon PPO3 + chr2R_5_23065001 chr2R_23065001 CanS-SH 1129 chr2R 23070351 23070414 chr2R 23070521 23070585 10 171 19.0 14.0 16.5 0.6 234 chr2R 23070351 intron l(2)k09913 + chr2R 23070468 intron l(2)k09913 + chr2R 23070585 intron l(2)k09913 + chr2R_10_23070001 chr2R_23070001 CanS-SH 1130 chr2R 23098455 23098489 chr2R 23098707 23098741 6 252 19.0 22.0 20.5 0.3 286 chr2R 23098455 intergenic not near genes chr2R 23098598 intergenic not near genes chr2R 23098741 intergenic not near genes chr2R_6_23095001 chr2R_23095001 CanS-SH 1131 chr2R 23108893 23108933 chr2R 23109050 23109090 5 157 19.5 27.0 23.2 0.2 197 chr2R 23108893 intergenic not near genes chr2R 23108992 intergenic not near genes chr2R 23109090 intergenic not near genes chr2R_5_23105001 chr2R_23105001 CanS-SH 1132 chr2R 23186548 23186596 chr2R 23186701 23186757 7 159 17.0 19.5 18.2 0.4 209 chr2R 23186548 intron CG34371 - chr2R 23186652 intron CG34371 - chr2R 23186757 intron CG34371 - chr2R_7_23185001 chr2R_23185001 CanS-SH 1133 chr2R 23189959 23189976 chr2R 23190114 23190131 6 155 5.0 2.5 3.8 1.2 172 chr2R 23189959 intron CG34371 - chr2R 23190045 intron CG34371 - chr2R 23190131 intron CG34371 - chr2R_6_23190001 chr2R_23190001 CanS-SH 1134 chr2R 23194894 23194995 chr2R 23195045 23195261 18 202 7.5 9.0 8.2 2.0 367 chr2R 23194894 intron CG34371 - chr2R 23195078 intron CG34371 - chr2R 23195261 intron CG34371 - chr2R_18_23195001 chr2R_23195001 CanS-SH 1135 chr2R 23236743 23236853 chr2R 23236916 23237022 15 173 7.5 5.0 6.2 2.1 279 chr2R 23236743 intergenic not near genes chr2R 23236882 intergenic not near genes chr2R 23237022 intergenic not near genes chr2R_15_23235001 chr2R_23235001 CanS-SH 1136 chr2R 23240785 23240819 chr2R 23241052 23241086 7 267 21.5 20.5 21.0 0.3 301 chr2R 23240785 intergenic not near genes chr2R 23240936 intergenic not near genes chr2R 23241086 intergenic not near genes chr2R_7_23240001 chr2R_23240001 CanS-SH 1137 chr2R 23295344 23295397 chr2R 23295526 23295579 10 182 21.5 19.5 20.5 0.5 235 chr2R 23295344 intergenic not near genes chr2R 23295462 intergenic not near genes chr2R 23295579 intergenic not near genes chr2R_10_23295001 chr2R_23295001 CanS-SH 1138 chr2R 23303782 23303823 chr2R 23304088 23304129 11 306 12.0 6.5 9.2 1.1 347 chr2R 23303782 intergenic not near genes chr2R 23303956 intergenic not near genes chr2R 23304129 intergenic not near genes chr2R_11_23300001 chr2R_23300001 CanS-SH 1139 chr2R 23402575 23402603 chr2R 23407697 23407725 flea 9 5135 11.5 8.0 9.8 0.8 5150 chr2R 23402575 intergenic CG3520 - chr2R 23405150 intergenic not near genes chr2R 23407725 intergenic not near genes chr2R_9_23405001 chr2R_23405001 CanS-SH 1140 chr2R 23407907 23407936 chr2R 23408237 23408266 6 330 23.0 13.0 18.0 0.3 359 chr2R 23407907 intergenic not near genes chr2R 23408086 intergenic not near genes chr2R 23408266 intergenic not near genes chr2R_6_23405001 chr2R_23405001 CanS-SH 1141 chr2R 23421306 23421363 chr2R 23421471 23421528 10 165 14.0 12.0 13.0 0.7 222 chr2R 23421306 intergenic CG9815 - chr2R 23421417 intergenic CG9815 - chr2R 23421528 3` UTR CG9815 - chr2R_10_23420001 chr2R_23420001 CanS-SH 1142 chr2R 23423672 23423702 chr2R 23423905 23423935 6 233 23.5 26.0 24.8 0.2 263 chr2R 23423672 intron CG9815 - chr2R 23423804 intron CG9815 - chr2R 23423935 intron CG9815 - chr2R_6_23420001 chr2R_23420001 CanS-SH 1143 chr2R 23437167 23437199 chr2R 23437319 23437351 6 152 18.0 21.5 19.8 0.3 184 chr2R 23437167 intergenic not near genes chr2R 23437259 intergenic not near genes chr2R 23437351 intergenic not near genes chr2R_6_23435001 chr2R_23435001 CanS-SH 1144 chr2R 23467500 23467581 chr2R 23467705 23467786 9 205 4.5 6.0 5.2 1.5 286 chr2R 23467500 intron CG43795 + chr2R 23467643 intron CG43795 + chr2R 23467786 intron CG43795 + chr2R_9_23465001 chr2R_23465001 CanS-SH 1145 chr2R 23475643 23475665 chr2R 23475797 23475819 6 154 9.0 14.0 11.5 0.5 176 chr2R 23475643 intron CG43795 + chr2R 23475731 intron,3` UTR CG43795 +,CG13557 - chr2R 23475819 intron,exon CG43795 +,CG13557 - chr2R_6_23475001 chr2R_23475001 CanS-SH 1146 chr2R 23482468 23482551 chr2R 23482621 23482720 10 158 18.0 13.5 15.8 0.6 252 chr2R 23482468 exon CG43795 + chr2R 23482594 intron CG43795 + chr2R 23482720 intron CG43795 + chr2R_10_23480001 chr2R_23480001 CanS-SH 1147 chr2R 23493608 23493680 chr2R 23493769 23493841 24 161 9.0 7.5 8.2 2.6 233 chr2R 23493608 intergenic not near genes chr2R 23493724 intergenic not near genes chr2R 23493841 intergenic not near genes chr2R_24_23490001 chr2R_23490001 CanS-SH 1148 chr2R 23508845 23508939 chr2R 23509037 23509131 19 192 5.5 4.0 4.8 3.3 286 chr2R 23508845 intergenic not near genes chr2R 23508988 intergenic not near genes chr2R 23509131 intergenic not near genes chr2R_19_23505001 chr2R_23505001 CanS-SH 1149 chr2R 23529513 23529541 chr2R 23537164 23537192 412 9 7651 13.5 10.0 11.8 0.7 7679 chr2R 23529513 exon bw - chr2R 23533352 intron bw - chr2R 23537192 exon bw - chr2R_9_23530001 chr2R_23530001 CanS-SH 1150 chr2R 23588020 23588064 chr2R 23588173 23588217 18 153 7.0 15.5 11.2 1.5 197 chr2R 23588020 intron apt + chr2R 23588118 intron apt + chr2R 23588217 intron apt + chr2R_18_23585001 chr2R_23585001 CanS-SH 1151 chr2R 23606977 23607170 chr2R 23607133 23607338 24 165 4.5 8.5 6.5 3.2 361 chr2R 23606977 intron CG17664 - chr2R 23607158 intron CG17664 - chr2R 23607338 intron CG17664 - chr2R_24_23605001 chr2R_23605001 CanS-SH 1152 chr2R 23680175 23680253 chr2R 23680329 23680407 24 154 10.0 6.0 8.0 2.7 232 chr2R 23680175 3` UTR Pde8 + chr2R 23680291 3` UTR Pde8 + chr2R 23680407 3` UTR Pde8 + chr2R_24_23680001 chr2R_23680001 CanS-SH 1153 chr2R 23763524 23763554 chr2R 23763692 23763722 4 168 25.0 24.5 24.8 0.2 198 chr2R 23763524 intron CG9850 - chr2R 23763623 intron CG9850 - chr2R 23763722 intron CG9850 - chr2R_4_23760001 chr2R_23760001 CanS-SH 1154 chr2R 23771236 23771302 chr2R 23771389 23771459 10 155 7.0 9.0 8.0 1.1 223 chr2R 23771236 intron CG9850 - chr2R 23771348 intron CG9850 - chr2R 23771459 intron CG9850 - chr2R_10_23770001 chr2R_23770001 CanS-SH 1155 chr2R 23802211 23802266 chr2R 23802389 23802444 16 178 21.5 19.0 20.2 0.8 233 chr2R 23802211 exon CG30177 + chr2R 23802328 3` UTR CG30177 + chr2R 23802444 3` UTR CG30177 + chr2R_16_23800001 chr2R_23800001 CanS-SH 1156 chr2R 23819073 23819120 chr2R 23819243 23819290 9 170 21.5 15.0 18.2 0.5 217 chr2R 23819073 intergenic not near genes chr2R 23819182 intergenic not near genes chr2R 23819290 intergenic not near genes chr2R_9_23815001 chr2R_23815001 CanS-SH 1157 chr2R 23843479 23843571 chr2R 23843631 23843723 20 152 23.5 25.5 24.5 0.8 244 chr2R 23843479 intergenic Snap29 -,shu - chr2R 23843601 3` UTR Snap29 - chr2R 23843723 exon Snap29 - chr2R_20_23840001 chr2R_23840001 CanS-SH 1158 chr2R 23914235 23914276 chr2R 23921934 23921975 412 16 7699 13.0 11.0 12.0 1.2 7740 chr2R 23914235 exon kcc + chr2R 23918105 intron kcc + chr2R 23921975 exon kcc + chr2R_16_23915001 chr2R_23915001 CanS-SH 1159 chr2R 24031319 24031390 chr2R 24031478 24031549 26 159 10.5 6.0 8.2 2.8 230 chr2R 24031319 5` UTR CG30172 - chr2R 24031434 intergenic CG30172 -,Chi - chr2R 24031549 3` UTR Chi - chr2R_26_24030001 chr2R_24030001 CanS-SH 1160 chr2R 24177169 24177214 chr2R 24184729 24184774 412 20 7560 28.0 8.5 18.2 1.0 7605 chr2R 24177169 3` UTR Nop60B + chr2R 24180972 intron Nop60B + chr2R 24184774 3` UTR Nop60B + chr2R_20_24180001 chr2R_24180001 CanS-SH 1161 chr2R 24228324 24228403 chr2R 24228480 24228559 14 156 8.0 9.0 8.5 1.5 235 chr2R 24228324 intron CG30419 - chr2R 24228442 intron CG30419 - chr2R 24228559 intron CG30419 - chr2R_14_24225001 chr2R_24225001 CanS-SH 1162 chr2R 24283580 24283611 chr2R 24283796 24283827 7 216 9.5 13.0 11.2 0.6 247 chr2R 24283580 intron nvy + chr2R 24283704 intron nvy + chr2R 24283827 intron nvy + chr2R_7_24280001 chr2R_24280001 CanS-SH 1163 chr2R 24303512 24303538 chr2R 24303666 24303692 7 154 8.0 15.5 11.8 0.5 180 chr2R 24303512 intergenic not near genes chr2R 24303602 intergenic not near genes chr2R 24303692 intergenic not near genes chr2R_7_24300001 chr2R_24300001 CanS-SH 1164 chr2R 24320114 24320202 chr2R 24320266 24320354 20 152 6.0 8.0 7.0 2.5 240 chr2R 24320114 intergenic not near genes chr2R 24320234 intergenic not near genes chr2R 24320354 intergenic not near genes chr2R_20_24320001 chr2R_24320001 CanS-SH 1165 chr2R 24340316 24340389 chr2R 24340479 24340559 11 166 22.5 11.5 17.0 0.6 243 chr2R 24340316 intergenic not near genes chr2R 24340438 intergenic not near genes chr2R 24340559 intergenic not near genes chr2R_11_24340001 chr2R_24340001 CanS-SH 1166 chr2R 24353365 24353391 chr2R 24361802 24361828 roo 9 8437 16.0 8.5 12.2 0.7 8463 chr2R 24353365 intron,intron bs +,CR44811 - chr2R 24357596 intron,intron bs +,CR44811 - chr2R 24361828 intron,intron bs +,CR44811 - chr2R_9_24355001 chr2R_24355001 CanS-SH 1167 chr2R 24430841 24430927 chr2R 24431003 24431090 11 163 0.0 7.0 3.5 2.4 249 chr2R 24430841 intergenic CG15873 - chr2R 24430966 intergenic CG15873 -,Pgam5-2 - chr2R 24431090 intergenic Pgam5-2 -,CG15873 - chr2R_11_24430001 chr2R_24430001 CanS-SH 1168 chr2R 24448319 24448405 chr2R 24448636 24448722 7 317 18.5 18.5 18.5 0.4 403 chr2R 24448319 intergenic not near genes chr2R 24448520 intergenic not near genes chr2R 24448722 intergenic not near genes chr2R_7_24445001 chr2R_24445001 CanS-SH 1169 chr2R 24493012 24493071 chr2R 24493176 24493235 24 164 14.0 4.5 9.2 2.4 223 chr2R 24493012 intergenic CG13589 -,CG13590 - chr2R 24493124 intergenic CG13590 -,CG13589 - chr2R 24493235 intergenic CG13590 -,CG13589 - chr2R_24_24490001 chr2R_24490001 CanS-SH 1170 chr2R 24590050 24590124 chr2R 24590217 24590291 23 167 9.5 9.5 9.5 2.2 241 chr2R 24590050 intron pio + chr2R 24590170 intron pio + chr2R 24590291 intron pio + chr2R_23_24590001 chr2R_24590001 CanS-SH 1171 chr2R 24591515 24591543 chr2R 24591670 24591698 5 155 19.5 30.0 24.8 0.2 183 chr2R 24591515 intron pio + chr2R 24591606 intron pio + chr2R 24591698 intron pio + chr2R_5_24590001 chr2R_24590001 CanS-SH 1172 chr2R 24636836 24636856 chr2R 24636997 24637017 4 161 32.0 19.5 25.8 0.1 181 chr2R 24636836 intron CG13594 - chr2R 24636926 intron CG13594 - chr2R 24637017 intron CG13594 - chr2R_4_24635001 chr2R_24635001 CanS-SH 1173 chr2R 24642310 24642385 chr2R 24642467 24642542 11 157 18.0 17.0 17.5 0.6 232 chr2R 24642310 intergenic CG4781 - chr2R 24642426 intergenic CG4781 - chr2R 24642542 intergenic CG4781 - chr2R_11_24640001 chr2R_24640001 CanS-SH 1174 chr2R 24647498 24647557 chr2R 24655144 24655189 412 11 7642 10.5 5.5 8.0 1.2 7691 chr2R 24647498 intergenic not near genes chr2R 24651344 intergenic not near genes chr2R 24655189 intergenic not near genes chr2R_11_24650001 chr2R_24650001 CanS-SH 1175 chr2R 24727819 24727858 chr2R 24735402 24735441 mdg1 10 7583 15.5 5.5 10.5 0.9 7622 chr2R 24727819 intron Mid1 - chr2R 24731630 intron Mid1 - chr2R 24735441 intron Mid1 - chr2R_10_24730001 chr2R_24730001 CanS-SH 1176 chr2R 24763545 24763589 chr2R 24765596 24765640 G2 13 2051 8.5 5.5 7.0 1.6 2095 chr2R 24763545 exon CG3894 + chr2R 24764592 intron CG3894 + chr2R 24765640 exon CG3894 + chr2R_13_24760001 chr2R_24760001 CanS-SH 1177 chr2R 24859774 24859851 chr2R 24859935 24860012 29 161 10.5 0.0 5.2 4.7 238 chr2R 24859774 5` UTR CR44829 + chr2R 24859893 5` UTR CR44829 + chr2R 24860012 5` UTR CR44829 + chr2R_29_24855001 chr2R_24855001 CanS-SH 1178 chr2R 24883983 24884060 chr2R 24884140 24884217 35 157 10.0 10.5 10.2 3.1 234 chr2R 24883983 intron NKAIN + chr2R 24884100 intron NKAIN + chr2R 24884217 intron NKAIN + chr2R_35_24880001 chr2R_24880001 CanS-SH 1179 chr2R 24926291 24926373 chr2R 24926489 24926571 5 198 18.0 23.0 20.5 0.2 280 chr2R 24926291 intron pain - chr2R 24926431 intron pain - chr2R 24926571 intron pain - chr2R_5_24925001 chr2R_24925001 CanS-SH 1180 chr2R 25018285 25018329 chr2R 25018461 25018505 6 176 24.0 24.5 24.2 0.2 220 chr2R 25018285 intron uzip + chr2R 25018395 intron uzip + chr2R 25018505 intron uzip + chr2R_6_25015001 chr2R_25015001 CanS-SH 1181 chr2R 25022574 25022654 chr2R 25022733 25022813 11 159 26.0 27.0 26.5 0.4 239 chr2R 25022574 intron uzip + chr2R 25022694 intron uzip + chr2R 25022813 intron uzip + chr2R_11_25020001 chr2R_25020001 CanS-SH 1182 chr2R 25081549 25081578 chr2R 25082720 25082749 7 1171 24.5 25.5 25.0 0.3 1200 chr2R 25081549 intron gol - chr2R 25082149 intron gol - chr2R 25082749 intron gol - chr2R_7_25080001 chr2R_25080001 CanS-SH 1183 chr2R 25101210 25101273 chr2R 25101387 25101450 11 177 31.0 19.0 25.0 0.4 240 chr2R 25101210 intron lov - chr2R 25101330 intron lov - chr2R 25101450 intron lov - chr2R_11_25100001 chr2R_25100001 CanS-SH 1184 chr2R 25104732 25104776 chr2R 25104902 25104946 7 174 7.0 6.0 6.5 0.9 214 chr2R 25104732 intron lov - chr2R 25104839 intron lov - chr2R 25104946 intron lov - chr2R_7_25100001 chr2R_25100001 CanS-SH 1185 chr2R 25124410 25124482 chr2R 25124576 25124647 4 166 15.5 20.0 17.8 0.2 237 chr2R 25124410 intron lov - chr2R 25124528 intron lov - chr2R 25124647 intron lov - chr2R_4_25120001 chr2R_25120001 CanS-SH 1186 chr2R 25134323 25134384 chr2R 25134481 25134542 8 158 22.0 19.5 20.8 0.4 219 chr2R 25134323 intron lov - chr2R 25134432 intron lov - chr2R 25134542 intron lov - chr2R_8_25130001 chr2R_25130001 CanS-SH 1187 chr2R 25141600 25141629 chr2R 25159365 25159394 roo 8 17765 13.5 10.5 12.0 0.6 17794 chr2R 25141600 intergenic not near genes chr2R 25150497 intergenic not near genes chr2R 25159394 intergenic not near genes chr2R_8_25150001 chr2R_25150001 CanS-SH 1188 chr2R 25166705 25166793 chr2R 25166896 25166984 8 191 17.0 21.0 19.0 0.4 279 chr2R 25166705 intergenic not near genes chr2R 25166844 intergenic not near genes chr2R 25166984 intergenic not near genes chr2R_8_25165001 chr2R_25165001 CanS-SH 1189 chr2R 25193274 25193367 chr2R 25193491 25193586 11 218 11.0 15.0 13.0 0.8 312 chr2R 25193274 intron CG9380 - chr2R 25193430 intron CG9380 - chr2R 25193586 intron CG9380 - chr2R_11_25190001 chr2R_25190001 CanS-SH 1190 chr2R 25201169 25201207 chr2R 25201370 25201408 6 201 14.5 16.0 15.2 0.4 239 chr2R 25201169 intron CG9380 - chr2R 25201288 intron CG9380 - chr2R 25201408 intron CG9380 - chr2R_6_25200001 chr2R_25200001 CanS-SH 1191 chr2R 25202189 25202239 chr2R 25202371 25202421 6 182 15.0 9.5 12.2 0.5 232 chr2R 25202189 intron CG9380 - chr2R 25202305 intron CG9380 - chr2R 25202421 intron CG9380 - chr2R_6_25200001 chr2R_25200001 CanS-SH 1192 chr3L 68923 68998 chr3L 69085 69160 35 162 10.5 12.5 11.5 2.8 237 chr3L 68923 3` UTR Lsp1gamma + chr3L 69042 intergenic Lsp1gamma +,CR44510 + chr3L 69160 5` UTR CR44510 + chr3L_35_65001 chr3L_65001 CanS-SH 1193 chr3L 88679 88719 chr3L 90674 90714 11 1995 12.5 10.5 11.5 0.9 2035 chr3L 88679 intergenic not near genes chr3L 89696 intergenic not near genes chr3L 90714 intergenic not near genes chr3L_11_85001 chr3L_85001 CanS-SH 1194 chr3L 110151 110188 chr3L 119393 119430 roo 8 9242 14.5 9.0 11.8 0.6 9279 chr3L 110151 intergenic not near genes chr3L 114790 intergenic not near genes chr3L 119430 intergenic not near genes chr3L_8_110001 chr3L_110001 CanS-SH 1195 chr3L 295994 296030 chr3L 296388 296424 13 394 19.5 6.5 13.0 0.9 430 chr3L 295994 intron RhoGEF3 + chr3L 296209 intron RhoGEF3 + chr3L 296424 intron RhoGEF3 + chr3L_13_295001 chr3L_295001 CanS-SH 1196 chr3L 343128 343171 chr3L 343326 343369 16 198 11.0 15.0 13.0 1.1 241 chr3L 343128 intron Ptpmeg + chr3L 343248 intron Ptpmeg + chr3L 343369 intron Ptpmeg + chr3L_16_340001 chr3L_340001 CanS-SH 1197 chr3L 402655 402660 chr3L 409783 409788 297 4 7128 15.0 16.0 15.5 0.2 7133 chr3L 402655 intergenic not near genes chr3L 406222 intergenic not near genes chr3L 409788 intergenic not near genes chr3L_4_405001 chr3L_405001 CanS-SH 1198 chr3L 445507 445577 chr3L 445658 445731 15 153 6.5 12.0 9.2 1.5 224 chr3L 445507 exon klar - chr3L 445619 intron klar - chr3L 445731 exon klar - chr3L_15_445001 chr3L_445001 CanS-SH 1199 chr3L 565795 565799 chr3L 566485 566489 5 690 0.0 22.0 11.0 0.4 694 chr3L 565795 intron hipk + chr3L 566142 intron hipk + chr3L 566489 intron hipk + chr3L_5_565001 chr3L_565001 CanS-SH 1200 chr3L 567035 567126 chr3L 567281 567373 13 246 7.5 8.0 7.8 1.5 338 chr3L 567035 intron hipk + chr3L 567204 intron hipk + chr3L 567373 intron hipk + chr3L_13_565001 chr3L_565001 CanS-SH 1201 chr3L 592890 592940 chr3L 593041 593091 20 151 11.5 6.0 8.8 2.0 201 chr3L 592890 intergenic MED14 + chr3L 592990 intergenic MED14 + chr3L 593091 intergenic MED14 + chr3L_20_590001 chr3L_590001 CanS-SH 1202 chr3L 606844 606908 chr3L 606998 607062 17 154 7.0 0.0 3.5 3.8 218 chr3L 606844 intergenic Reg-2 - chr3L 606953 intergenic Reg-2 - chr3L 607062 intergenic Reg-2 - chr3L_17_605001 chr3L_605001 CanS-SH 1203 chr3L 642436 642479 chr3L 642602 642645 22 166 10.0 14.0 12.0 1.7 209 chr3L 642436 5` UTR CR43334 + chr3L 642540 5` UTR CR43334 + chr3L 642645 5` UTR CR43334 + chr3L_22_640001 chr3L_640001 CanS-SH 1204 chr3L 651328 651409 chr3L 651491 651572 28 163 9.0 12.0 10.5 2.4 244 chr3L 651328 intergenic Gale +,CG3402 - chr3L 651450 intergenic CG3402 -,Gale + chr3L 651572 3` UTR CG3402 - chr3L_28_650001 chr3L_650001 CanS-SH 1205 chr3L 704248 704278 chr3L 704411 704439 8 162 5.0 7.5 6.2 1.1 191 chr3L 704248 intergenic not near genes chr3L 704344 intergenic not near genes chr3L 704439 intergenic not near genes chr3L_8_700001 chr3L_700001 CanS-SH 1206 chr3L 738245 738311 chr3L 738398 738464 21 153 8.0 9.0 8.5 2.2 219 chr3L 738245 exon hng3 - chr3L 738354 exon hng3 - chr3L 738464 exon hng3 - chr3L_21_735001 chr3L_735001 CanS-SH 1207 chr3L 743787 743793 chr3L 743939 743945 5 152 6.5 6.5 6.5 0.7 158 chr3L 743787 intron hng3 - chr3L 743866 intron hng3 - chr3L 743945 intron hng3 - chr3L_5_740001 chr3L_740001 CanS-SH 1208 chr3L 746434 746505 chr3L 746594 746665 23 160 10.5 11.5 11.0 1.9 231 chr3L 746434 intron hng3 - chr3L 746550 intron hng3 - chr3L 746665 intron hng3 - chr3L_23_745001 chr3L_745001 CanS-SH 1209 chr3L 789853 789892 chr3L 790413 790452 roo 11 560 17.0 9.5 13.2 0.8 599 chr3L 789853 intergenic not near genes chr3L 790152 intergenic not near genes chr3L 790452 intergenic not near genes chr3L_11_790001 chr3L_790001 CanS-SH 1210 chr3L 823973 824043 chr3L 824130 824195 16 154 8.5 7.5 8.0 1.8 222 chr3L 823973 intergenic not near genes chr3L 824084 intergenic not near genes chr3L 824195 intergenic not near genes chr3L_16_820001 chr3L_820001 CanS-SH 1211 chr3L 843658 843692 chr3L 843814 843849 8 157 14.0 1.0 7.5 0.9 191 chr3L 843658 3` UTR Gr61a + chr3L 843754 intergenic Gr61a +,CG13889 + chr3L 843849 intergenic CG13889 +,Gr61a + chr3L_8_840001 chr3L_840001 CanS-SH 1212 chr3L 857935 857968 chr3L 866491 866524 Tirant 7 8556 17.0 7.5 12.2 0.5 8589 chr3L 857935 intergenic not near genes chr3L 862230 intergenic not near genes chr3L 866524 5` UTR CG12502 + chr3L_7_860001 chr3L_860001 CanS-SH 1213 chr3L 875593 875669 chr3L 875755 875831 28 162 13.0 9.5 11.2 2.3 238 chr3L 875593 intron CG32479 + chr3L 875712 intron CG32479 + chr3L 875831 intron CG32479 + chr3L_28_875001 chr3L_875001 CanS-SH 1214 chr3L 904998 905094 chr3L 905155 905253 14 158 3.5 2.5 3.0 3.5 255 chr3L 904998 intergenic not near genes chr3L 905126 intergenic not near genes chr3L 905253 intergenic not near genes chr3L_14_905001 chr3L_905001 CanS-SH 1215 chr3L 925113 925148 chr3L 932614 932649 mdg1 10 7501 14.0 9.0 11.5 0.8 7536 chr3L 925113 intron Glut1 + chr3L 928881 intron Glut1 + chr3L 932649 intron Glut1 + chr3L_10_925001 chr3L_925001 CanS-SH 1216 chr3L 933836 933906 chr3L 934015 934084 18 179 11.0 5.0 8.0 2.0 248 chr3L 933836 intron Glut1 + chr3L 933960 intron Glut1 + chr3L 934084 intron Glut1 + chr3L_18_930001 chr3L_930001 CanS-SH 1217 chr3L 939715 939743 chr3L 940911 940939 jockey 7 1196 22.0 4.5 13.2 0.5 1224 chr3L 939715 intron Glut1 + chr3L 940327 intron Glut1 + chr3L 940939 intron Glut1 + chr3L_7_940001 chr3L_940001 CanS-SH 1218 chr3L 960944 961018 chr3L 961112 961186 25 168 10.0 10.5 10.2 2.2 242 chr3L 960944 intron Glut1 + chr3L 961065 intron Glut1 + chr3L 961186 intron Glut1 + chr3L_25_960001 chr3L_960001 CanS-SH 1219 chr3L 1015131 1015143 chr3L 1015294 1015306 4 163 0.0 5.5 2.8 1.1 175 chr3L 1015131 intron trio - chr3L 1015218 intron trio - chr3L 1015306 intron trio - chr3L_4_1015001 chr3L_1015001 CanS-SH 1220 chr3L 1021812 1021817 chr3L 1021980 1021985 4 168 17.0 0.0 8.5 0.4 173 chr3L 1021812 intron trio - chr3L 1021898 intron trio - chr3L 1021985 intron trio - chr3L_4_1020001 chr3L_1020001 CanS-SH 1221 chr3L 1031564 1031577 chr3L 1031715 1031728 4 151 10.0 13.0 11.5 0.3 164 chr3L 1031564 intron trio - chr3L 1031646 intron trio - chr3L 1031728 intron trio - chr3L_4_1030001 chr3L_1030001 CanS-SH 1222 chr3L 1033287 1033323 chr3L 1033438 1033500 6 160 2.5 0.0 1.2 2.7 213 chr3L 1033287 intron trio - chr3L 1033394 intron trio - chr3L 1033500 intron trio - chr3L_6_1030001 chr3L_1030001 CanS-SH 1223 chr3L 1040489 1040580 chr3L 1040648 1040739 28 159 8.0 0.0 4.0 5.6 250 chr3L 1040489 intron bab1 - chr3L 1040614 intron bab1 - chr3L 1040739 intron bab1 - chr3L_28_1040001 chr3L_1040001 CanS-SH 1224 chr3L 1042929 1042981 chr3L 1043082 1043133 4 152 11.0 11.5 11.2 0.3 204 chr3L 1042929 intron bab1 - chr3L 1043031 intron bab1 - chr3L 1043133 intron bab1 - chr3L_4_1040001 chr3L_1040001 CanS-SH 1225 chr3L 1047287 1047325 chr3L 1055173 1055212 412 7 7887 11.0 3.5 7.2 0.9 7925 chr3L 1047287 intron bab1 - chr3L 1051250 intron bab1 - chr3L 1055212 intron bab1 - chr3L_7_1050001 chr3L_1050001 CanS-SH 1226 chr3L 1077697 1077782 chr3L 1078048 1078133 14 351 6.5 5.0 5.8 2.1 436 chr3L 1077697 intron bab1 - chr3L 1077915 intron bab1 - chr3L 1078133 intron bab1 - chr3L_14_1075001 chr3L_1075001 CanS-SH 1227 chr3L 1090977 1090999 chr3L 1091139 1091161 12 162 17.0 17.0 17.0 0.7 184 chr3L 1090977 intron bab1 - chr3L 1091069 intron bab1 - chr3L 1091161 intron bab1 - chr3L_12_1090001 chr3L_1090001 CanS-SH 1228 chr3L 1109570 1109655 chr3L 1109733 1109818 28 163 11.0 7.0 9.0 2.8 248 chr3L 1109570 intergenic not near genes chr3L 1109694 intergenic not near genes chr3L 1109818 intergenic not near genes chr3L_28_1105001 chr3L_1105001 CanS-SH 1229 chr3L 1154060 1154153 chr3L 1163288 1163378 roo 17 9228 4.5 4.0 4.2 3.3 9318 chr3L 1154060 intron bab2 - chr3L 1158719 intron bab2 - chr3L 1163378 intron bab2 - chr3L_17_1155001 chr3L_1155001 CanS-SH 1230 chr3L 1166948 1166983 chr3L 1167100 1167135 10 152 6.5 5.5 6.0 1.4 187 chr3L 1166948 intron bab2 - chr3L 1167042 intron bab2 - chr3L 1167135 intron bab2 - chr3L_10_1165001 chr3L_1165001 CanS-SH 1231 chr3L 1182783 1182794 chr3L 1182958 1182969 6 175 7.5 0.0 3.8 1.2 186 chr3L 1182783 intergenic not near genes chr3L 1182876 intergenic not near genes chr3L 1182969 intergenic not near genes chr3L_6_1180001 chr3L_1180001 CanS-SH 1232 chr3L 1219527 1219571 chr3L 1227334 1227379 412 17 7808 16.5 7.5 12.0 1.3 7852 chr3L 1219527 intron mwh + chr3L 1223453 intron mwh + chr3L 1227379 intron mwh + chr3L_17_1220001 chr3L_1220001 CanS-SH 1233 chr3L 1251745 1251851 chr3L 1251904 1252007 16 158 1.0 1.5 1.2 7.3 262 chr3L 1251745 3` UTR CG9129 + chr3L 1251876 intergenic CG9129 +,CG9130 +,CG9133 + chr3L 1252007 intergenic CG9130 +,CG9133 +,CG9129 + chr3L_16_1250001 chr3L_1250001 CanS-SH 1234 chr3L 1257620 1257649 chr3L 1257775 1257804 11 155 0.5 19.0 9.8 1.0 184 chr3L 1257620 intron CG9134 + chr3L 1257712 intron CG9134 + chr3L 1257804 intron CG9134 + chr3L_11_1255001 chr3L_1255001 CanS-SH 1235 chr3L 1311039 1311081 chr3L 1315824 1315866 11 4785 52.0 56.5 54.2 0.2 4827 chr3L 1311039 exon CG2469 + chr3L 1313452 intergenic CG9186 -,CG9153 + chr3L 1315866 exon CG9153 + chr3L_11_1310001 chr3L_1310001 CanS-SH 1236 chr3L 1321488 1321589 chr3L 1321763 1321864 19 275 5.5 6.0 5.8 2.8 376 chr3L 1321488 intron Myo61F + chr3L 1321676 intron Myo61F + chr3L 1321864 intron,3` UTR Myo61F +,CG9184 - chr3L_19_1320001 chr3L_1320001 CanS-SH 1237 chr3L 1396682 1396759 chr3L 1396837 1396914 27 155 10.5 11.0 10.8 2.3 232 chr3L 1396682 intron Ptp61F - chr3L 1396798 intron Ptp61F - chr3L 1396914 intron Ptp61F - chr3L_27_1395001 chr3L_1395001 CanS-SH 1238 chr3L 1463369 1463434 chr3L 1463525 1463590 12 156 0.0 12.5 6.2 1.7 221 chr3L 1463369 intron Ptp61F - chr3L 1463480 intron Ptp61F - chr3L 1463590 intron Ptp61F - chr3L_12_1460001 chr3L_1460001 CanS-SH 1239 chr3L 1477336 1477398 chr3L 1477501 1477555 7 163 0.0 0.0 0.0 7.0 219 chr3L 1477336 intron stet - chr3L 1477446 intron stet - chr3L 1477555 intron stet - chr3L_7_1475001 chr3L_1475001 CanS-SH 1240 chr3L 1485662 1485688 chr3L 1486908 1486934 1360 14 1246 13.0 10.0 11.5 1.1 1272 chr3L 1485662 intron stet - chr3L 1486298 intron stet - chr3L 1486934 intron stet - chr3L_14_1485001 chr3L_1485001 CanS-SH 1241 chr3L 1501919 1502021 chr3L 1502077 1502177 31 156 1.0 4.0 2.5 8.9 258 chr3L 1501919 intron pUf68 - chr3L 1502048 intron pUf68 - chr3L 1502177 intron pUf68 - chr3L_31_1500001 chr3L_1500001 CanS-SH 1242 chr3L 1505939 1505979 chr3L 1513611 1513651 17.6 15 7672 23.0 9.5 16.2 0.9 7712 chr3L 1505939 intron,intron Psa +,cue - chr3L 1509795 intron,intron Psa +,cue - chr3L 1513651 intron,intron Psa +,cue - chr3L_15_1505001 chr3L_1505001 CanS-SH 1243 chr3L 1536812 1536885 chr3L 1536971 1537044 17 159 2.5 16.0 9.2 1.7 232 chr3L 1536812 5` UTR CG12091 - chr3L 1536928 intergenic CG12091 -,CG7852 + chr3L 1537044 intergenic CG7852 +,CG12091 - chr3L_17_1535001 chr3L_1535001 CanS-SH 1244 chr3L 1585858 1585938 chr3L 1586014 1586094 20 156 9.0 7.5 8.2 2.2 236 chr3L 1585858 intron CG13917 + chr3L 1585976 intron CG13917 + chr3L 1586094 intron CG13917 + chr3L_20_1585001 chr3L_1585001 CanS-SH 1245 chr3L 1639147 1639232 chr3L 1639403 1639488 14 256 2.0 5.5 3.8 2.9 341 chr3L 1639147 5` UTR metl - chr3L 1639318 intergenic metl -,Bgb + chr3L 1639488 intergenic Bgb +,metl - chr3L_14_1635001 chr3L_1635001 CanS-SH 1246 chr3L 1683962 1684028 chr3L 1684115 1684181 16 153 5.5 1.5 3.5 3.6 219 chr3L 1683962 intron CG7991 + chr3L 1684072 intron CG7991 + chr3L 1684181 intron CG7991 + chr3L_16_1680001 chr3L_1680001 CanS-SH 1247 chr3L 1688175 1688263 chr3L 1688378 1688467 5 203 4.5 4.0 4.2 1.0 292 chr3L 1688175 intron CG7991 + chr3L 1688321 intron CG7991 + chr3L 1688467 intron CG7991 + chr3L_5_1685001 chr3L_1685001 CanS-SH 1248 chr3L 1740795 1740827 chr3L 1741113 1741145 pogo 11 318 19.0 11.0 15.0 0.7 350 chr3L 1740795 intron Gk + chr3L 1740970 intron Gk + chr3L 1741145 intron Gk + chr3L_11_1740001 chr3L_1740001 CanS-SH 1249 chr3L 1746563 1746584 chr3L 1746736 1746757 9 173 11.5 13.5 12.5 0.7 194 chr3L 1746563 intergenic CG13921 + chr3L 1746660 intergenic CG13921 + chr3L 1746757 intergenic CG13921 + chr3L_9_1745001 chr3L_1745001 CanS-SH 1250 chr3L 1805655 1805711 chr3L 1805904 1805960 12 249 5.5 11.5 8.5 1.3 305 chr3L 1805655 exon CG42676 + chr3L 1805808 intron CG42676 + chr3L 1805960 intron CG42676 + chr3L_12_1805001 chr3L_1805001 CanS-SH 1251 chr3L 1848575 1848663 chr3L 1848728 1848816 19 153 5.5 7.5 6.5 2.5 241 chr3L 1848575 intergenic not near genes chr3L 1848696 intergenic not near genes chr3L 1848816 intergenic not near genes chr3L_19_1845001 chr3L_1845001 CanS-SH 1252 chr3L 1882289 1882379 chr3L 1882460 1882549 17 170 11.5 5.0 8.2 1.8 260 chr3L 1882289 intron CG13937 - chr3L 1882419 intron CG13937 - chr3L 1882549 intron CG13937 - chr3L_17_1880001 chr3L_1880001 CanS-SH 1253 chr3L 1922381 1922428 chr3L 1922536 1922583 16 155 8.0 12.5 10.2 1.4 202 chr3L 1922381 intron Dbx + chr3L 1922482 intron Dbx + chr3L 1922583 intron Dbx + chr3L_16_1920001 chr3L_1920001 CanS-SH 1254 chr3L 2006393 2006485 chr3L 2006548 2006640 21 155 8.0 6.0 7.0 2.6 247 chr3L 2006393 intergenic not near genes chr3L 2006516 intergenic not near genes chr3L 2006640 intergenic not near genes chr3L_21_2005001 chr3L_2005001 CanS-SH 1255 chr3L 2015703 2015773 chr3L 2015856 2015926 6 153 6.5 1.0 3.8 1.2 223 chr3L 2015703 intergenic not near genes chr3L 2015814 intergenic not near genes chr3L 2015926 intergenic not near genes chr3L_6_2015001 chr3L_2015001 CanS-SH 1256 chr3L 2108180 2108219 chr3L 2113459 2113498 copia 10 5279 13.5 5.5 9.5 1.0 5318 chr3L 2108180 intron sls - chr3L 2110839 intron sls - chr3L 2113498 intron sls - chr3L_10_2110001 chr3L_2110001 CanS-SH 1257 chr3L 2139147 2139226 chr3L 2139303 2139382 29 156 11.5 10.0 10.8 2.5 235 chr3L 2139147 intron zormin - chr3L 2139264 intron zormin - chr3L 2139382 intron zormin - chr3L_29_2135001 chr3L_2135001 CanS-SH 1258 chr3L 2168717 2168779 chr3L 2168883 2168945 24 166 7.5 8.0 7.8 2.7 228 chr3L 2168717 exon CG15879 - chr3L 2168831 intron CG15879 - chr3L 2168945 intron CG15879 - chr3L_24_2165001 chr3L_2165001 CanS-SH 1259 chr3L 2180847 2181141 chr3L 2181113 2181295 23 208 0.0 0.0 0.0 23.0 448 chr3L 2180847 intergenic not near genes chr3L 2181071 intergenic not near genes chr3L 2181295 intergenic not near genes chr3L_23_2180001 chr3L_2180001 CanS-SH 1260 chr3L 2181148 2181196 chr3L 2181302 2181350 11 154 0.0 10.5 5.2 1.8 202 chr3L 2181148 intergenic not near genes chr3L 2181249 intergenic not near genes chr3L 2181350 intergenic not near genes chr3L_11_2180001 chr3L_2180001 CanS-SH 1261 chr3L 2199734 2199821 chr3L 2199885 2199972 18 151 6.0 7.5 6.8 2.3 238 chr3L 2199734 intergenic not near genes chr3L 2199853 intergenic not near genes chr3L 2199972 intergenic not near genes chr3L_18_2195001 chr3L_2195001 CanS-SH 1262 chr3L 2277913 2278003 chr3L 2278184 2278274 20 271 6.5 9.5 8.0 2.2 361 chr3L 2277913 3` UTR yellow-g2 + chr3L 2278094 intergenic yellow-g2 + chr3L 2278274 intergenic yellow-g2 + chr3L_20_2275001 chr3L_2275001 CanS-SH 1263 chr3L 2307936 2307996 chr3L 2308117 2308177 16 181 14.0 3.0 8.5 1.7 241 chr3L 2307936 intergenic not near genes chr3L 2308056 intergenic not near genes chr3L 2308177 intergenic not near genes chr3L_16_2305001 chr3L_2305001 CanS-SH 1264 chr3L 2310089 2310131 chr3L 2310907 2310949 21 818 11.5 8.0 9.8 1.9 860 chr3L 2310089 intergenic not near genes chr3L 2310519 intergenic not near genes chr3L 2310949 intergenic not near genes chr3L_21_2310001 chr3L_2310001 CanS-SH 1265 chr3L 2316640 2316698 chr3L 2316799 2316857 11 159 6.0 8.0 7.0 1.4 217 chr3L 2316640 intergenic CR45427 - chr3L 2316748 intergenic CR45427 - chr3L 2316857 intergenic CR45427 - chr3L_11_2315001 chr3L_2315001 CanS-SH 1266 chr3L 2355376 2355415 chr3L 2355639 2355678 8 263 13.5 0.0 6.8 1.0 302 chr3L 2355376 intergenic not near genes chr3L 2355527 intergenic not near genes chr3L 2355678 intergenic not near genes chr3L_8_2355001 chr3L_2355001 CanS-SH 1267 chr3L 2356001 2356079 chr3L 2356164 2356242 30 163 13.0 6.5 9.8 2.8 241 chr3L 2356001 intergenic not near genes chr3L 2356122 intergenic not near genes chr3L 2356242 intergenic not near genes chr3L_30_2355001 chr3L_2355001 CanS-SH 1268 chr3L 2411260 2411341 chr3L 2411415 2411496 10 155 3.0 3.5 3.2 2.4 236 chr3L 2411260 intron CG45186 + chr3L 2411378 intron CG45186 + chr3L 2411496 intron CG45186 + chr3L_10_2410001 chr3L_2410001 CanS-SH 1269 chr3L 2429014 2429072 chr3L 2429182 2429240 10 168 7.0 4.5 5.8 1.5 226 chr3L 2429014 intron CG45186 + chr3L 2429127 intron CG45186 + chr3L 2429240 intron CG45186 + chr3L_10_2425001 chr3L_2425001 CanS-SH 1270 chr3L 2433433 2433521 chr3L 2433591 2433679 33 158 2.0 7.5 4.8 5.7 246 chr3L 2433433 intron CG45186 + chr3L 2433556 intron CG45186 + chr3L 2433679 intron CG45186 + chr3L_33_2430001 chr3L_2430001 CanS-SH 1271 chr3L 2447440 2447485 chr3L 2456671 2456716 roo 15 9231 10.0 5.0 7.5 1.8 9276 chr3L 2447440 intron CG45186 + chr3L 2452078 intron CG45186 + chr3L 2456716 intron CG45186 + chr3L_15_2450001 chr3L_2450001 CanS-SH 1272 chr3L 2467420 2467438 chr3L 2467592 2467610 7 172 16.5 12.5 14.5 0.5 190 chr3L 2467420 intron CG45186 + chr3L 2467515 intron CG45186 + chr3L 2467610 intron CG45186 + chr3L_7_2465001 chr3L_2465001 CanS-SH 1273 chr3L 2515357 2515429 chr3L 2515514 2515586 19 157 1.0 10.0 5.5 2.9 229 chr3L 2515357 intron Spn - chr3L 2515472 intron Spn - chr3L 2515586 intron Spn - chr3L_19_2515001 chr3L_2515001 CanS-SH 1274 chr3L 2520590 2520644 chr3L 2520761 2520815 15 171 6.0 9.0 7.5 1.8 225 chr3L 2520590 intron Spn - chr3L 2520702 intron Spn - chr3L 2520815 intron Spn - chr3L_15_2520001 chr3L_2520001 CanS-SH 1275 chr3L 2533609 2533666 chr3L 2533766 2533823 16 157 11.0 4.0 7.5 1.9 214 chr3L 2533609 intron Spn - chr3L 2533716 intron Spn - chr3L 2533823 intron Spn - chr3L_16_2530001 chr3L_2530001 CanS-SH 1276 chr3L 2548197 2548267 chr3L 2548361 2548431 15 164 11.5 6.5 9.0 1.5 234 chr3L 2548197 intron Spn - chr3L 2548314 intron Spn - chr3L 2548431 intron Spn - chr3L_15_2545001 chr3L_2545001 CanS-SH 1277 chr3L 2551816 2551840 chr3L 2553590 2553614 9 1774 51.0 36.0 43.5 0.2 1798 chr3L 2551816 intron Spn - chr3L 2552715 intron Spn - chr3L 2553614 intron Spn - chr3L_9_2550001 chr3L_2550001 CanS-SH 1278 chr3L 2578391 2578434 chr3L 2578551 2578594 9 160 13.5 2.5 8.0 1.0 203 chr3L 2578391 intron msn - chr3L 2578492 intron msn - chr3L 2578594 intron msn - chr3L_9_2575001 chr3L_2575001 CanS-SH 1279 chr3L 2927778 2927817 chr3L 2936130 2936169 Tirant 18 8352 14.0 9.5 11.8 1.4 8391 chr3L 2927778 intron Shab + chr3L 2931974 intron Shab + chr3L 2936169 intron Shab + chr3L_18_2930001 chr3L_2930001 CanS-SH 1280 chr3L 3028931 3029018 chr3L 3029092 3029179 21 161 6.5 11.0 8.8 2.1 248 chr3L 3028931 intergenic not near genes chr3L 3029055 intergenic not near genes chr3L 3029179 intergenic not near genes chr3L_21_3025001 chr3L_3025001 CanS-SH 1281 chr3L 3030901 3030964 chr3L 3031056 3031119 8 155 2.0 8.5 5.2 1.3 218 chr3L 3030901 intergenic not near genes chr3L 3031010 intergenic not near genes chr3L 3031119 intergenic not near genes chr3L_8_3030001 chr3L_3030001 CanS-SH 1282 chr3L 3040258 3040288 chr3L 3042122 3042152 S-element 8 1864 17.0 6.5 11.8 0.6 1894 chr3L 3040258 3` UTR CG2162 + chr3L 3041205 intergenic not near genes chr3L 3042152 intergenic Jafrac2 + chr3L_8_3040001 chr3L_3040001 CanS-SH 1283 chr3L 3051679 3051722 chr3L 3051996 3052042 pogo 6 318 12.0 6.0 9.0 0.6 363 chr3L 3051679 3` UTR CG32485 + chr3L 3051860 intergenic CG32485 + chr3L 3052042 intergenic CG32485 +,CG1271 + chr3L_6_3050001 chr3L_3050001 CanS-SH 1284 chr3L 3057182 3057269 chr3L 3057401 3057488 20 219 6.5 8.5 7.5 2.4 306 chr3L 3057182 exon CG32486 - chr3L 3057335 intron CG32486 - chr3L 3057488 exon CG32486 - chr3L_20_3055001 chr3L_3055001 CanS-SH 1285 chr3L 3058244 3058280 chr3L 3058433 3058469 5 189 10.0 7.0 8.5 0.5 225 chr3L 3058244 intron CG32486 - chr3L 3058356 intron CG32486 - chr3L 3058469 intron CG32486 - chr3L_5_3055001 chr3L_3055001 CanS-SH 1286 chr3L 3061219 3061256 chr3L 3069877 3069914 Tirant 18 8658 9.5 10.0 9.8 1.7 8695 chr3L 3061219 intron CG32486 - chr3L 3065566 intron CG32486 - chr3L 3069914 intron CG32486 - chr3L_18_3065001 chr3L_3065001 CanS-SH 1287 chr3L 3269027 3269128 chr3L 3269193 3269294 15 166 0.0 5.0 2.5 4.3 267 chr3L 3269027 intergenic CG34265 + chr3L 3269160 intergenic CG34265 + chr3L 3269294 intergenic CG34265 + chr3L_15_3265001 chr3L_3265001 CanS-SH 1288 chr3L 3281378 3281420 chr3L 3281949 3281991 Doc 16 571 10.5 9.0 9.8 1.5 613 chr3L 3281378 intron CG12017 + chr3L 3281684 intron CG12017 + chr3L 3281991 intron CG12017 + chr3L_16_3280001 chr3L_3280001 CanS-SH 1289 chr3L 3310274 3310304 chr3L 3310428 3310458 9 154 7.0 9.5 8.2 1.0 184 chr3L 3310274 intron ZnT63C + chr3L 3310366 intron ZnT63C + chr3L 3310458 intron ZnT63C + chr3L_9_3310001 chr3L_3310001 CanS-SH 1290 chr3L 3314110 3314162 chr3L 3314294 3314346 13 184 12.0 11.0 11.5 1.0 236 chr3L 3314110 intergenic ZnT63C +,Drsl2 + chr3L 3314228 intergenic Drsl2 +,ZnT63C + chr3L 3314346 intergenic Drsl2 +,ZnT63C + chr3L_13_3310001 chr3L_3310001 CanS-SH 1291 chr3L 3317510 3317554 chr3L 3317664 3317708 16 154 0.5 16.5 8.5 1.7 198 chr3L 3317510 intergenic Drsl5 + chr3L 3317609 intergenic PIG-C -,Drsl5 + chr3L 3317708 intergenic PIG-C - chr3L_16_3315001 chr3L_3315001 CanS-SH 1292 chr3L 3436220 3436312 chr3L 3436374 3436466 31 154 7.0 9.0 8.0 3.4 246 chr3L 3436220 intron eIF5B - chr3L 3436343 intron eIF5B - chr3L 3436466 intron eIF5B - chr3L_31_3435001 chr3L_3435001 CanS-SH 1293 chr3L 3449196 3449232 chr3L 3449349 3449385 16 153 10.0 5.5 7.8 1.8 189 chr3L 3449196 intron eIF5B - chr3L 3449290 intron eIF5B - chr3L 3449385 intron eIF5B - chr3L_16_3445001 chr3L_3445001 CanS-SH 1294 chr3L 3470076 3470160 chr3L 3470232 3470311 17 153 4.5 8.0 6.2 2.4 235 chr3L 3470076 intron CG14971 - chr3L 3470194 intron CG14971 - chr3L 3470311 intron CG14971 - chr3L_17_3470001 chr3L_3470001 CanS-SH 1295 chr3L 3475022 3475044 chr3L 3475541 3475563 jockey 5 519 17.0 10.0 13.5 0.3 541 chr3L 3475022 intron CG42324 + chr3L 3475292 intron CG42324 + chr3L 3475563 intron CG42324 + chr3L_5_3475001 chr3L_3475001 CanS-SH 1296 chr3L 3500083 3500141 chr3L 3500247 3500305 18 164 12.0 4.5 8.2 2.0 222 chr3L 3500083 intron CG42324 + chr3L 3500194 intron CG42324 + chr3L 3500305 intron CG42324 + chr3L_18_3500001 chr3L_3500001 CanS-SH 1297 chr3L 3517932 3517973 chr3L 3518089 3518130 8 157 11.5 8.5 10.0 0.7 198 chr3L 3517932 intron Eip63E + chr3L 3518031 intron Eip63E + chr3L 3518130 intron Eip63E + chr3L_8_3515001 chr3L_3515001 CanS-SH 1298 chr3L 3548652 3548685 chr3L 3548849 3548882 11 197 11.5 9.5 10.5 1.0 230 chr3L 3548652 intron Eip63E + chr3L 3548767 intron Eip63E + chr3L 3548882 intron Eip63E + chr3L_11_3545001 chr3L_3545001 CanS-SH 1299 chr3L 3566330 3566416 chr3L 3566488 3566574 23 158 11.5 10.5 11.0 1.9 244 chr3L 3566330 intron Eip63E + chr3L 3566452 intron Eip63E + chr3L 3566574 intron Eip63E + chr3L_23_3565001 chr3L_3565001 CanS-SH 1300 chr3L 3601232 3601274 chr3L 3606618 3606660 copia 9 5386 9.5 7.0 8.2 1.0 5428 chr3L 3601232 intron Eip63E + chr3L 3603946 intron Eip63E + chr3L 3606660 intron Eip63E + chr3L_9_3600001 chr3L_3600001 CanS-SH 1301 chr3L 3620725 3620787 chr3L 3620890 3620952 24 165 8.5 11.5 10.0 2.2 227 chr3L 3620725 intron CG14974 - chr3L 3620838 intron CG14974 - chr3L 3620952 exon CG14974 - chr3L_24_3620001 chr3L_3620001 CanS-SH 1302 chr3L 3638487 3638528 chr3L 3638684 3638725 18 197 15.0 0.0 7.5 2.1 238 chr3L 3638487 intron dar1 + chr3L 3638606 intron dar1 + chr3L 3638725 intron dar1 + chr3L_18_3635001 chr3L_3635001 CanS-SH 1303 chr3L 3709383 3709449 chr3L 3709540 3709606 9 157 0.0 5.0 2.5 2.6 223 chr3L 3709383 intergenic CR45675 + chr3L 3709494 intergenic CR45675 + chr3L 3709606 intergenic not near genes chr3L_9_3705001 chr3L_3705001 CanS-SH 1304 chr3L 3753206 3753269 chr3L 3753373 3753437 18 168 9.0 11.0 10.0 1.6 231 chr3L 3753206 intron CG32264 - chr3L 3753322 intron CG32264 - chr3L 3753437 intron CG32264 - chr3L_18_3750001 chr3L_3750001 CanS-SH 1305 chr3L 3763686 3763699 chr3L 3763842 3763855 5 156 11.5 1.5 6.5 0.7 169 chr3L 3763686 intron CG32264 - chr3L 3763770 intron CG32264 - chr3L 3763855 intron CG32264 - chr3L_5_3760001 chr3L_3760001 CanS-SH 1306 chr3L 3766662 3766693 chr3L 3766823 3766854 14 161 15.5 0.0 7.8 1.6 192 chr3L 3766662 intron CG32264 - chr3L 3766758 intron CG32264 - chr3L 3766854 intron CG32264 - chr3L_14_3765001 chr3L_3765001 CanS-SH 1307 chr3L 3783210 3783278 chr3L 3783361 3783429 13 151 4.5 9.0 6.8 1.7 219 chr3L 3783210 intron CG32264 - chr3L 3783320 intron CG32264 - chr3L 3783429 intron CG32264 - chr3L_13_3780001 chr3L_3780001 CanS-SH 1308 chr3L 3797971 3798056 chr3L 3798126 3798211 17 155 7.5 9.0 8.2 1.8 240 chr3L 3797971 intron CG32264 - chr3L 3798091 intron CG32264 - chr3L 3798211 intron CG32264 - chr3L_17_3795001 chr3L_3795001 CanS-SH 1309 chr3L 3814980 3815076 chr3L 3815136 3815232 20 156 0.0 5.0 2.5 5.7 252 chr3L 3814980 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815106 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815232 intron,3` UTR Scsalpha +,CR43932 - chr3L_20_3815001 chr3L_3815001 CanS-SH 1310 chr3L 3833676 3833762 chr3L 3833992 3834078 pogo 6 316 7.0 3.0 5.0 1.0 402 chr3L 3833676 intron enc + chr3L 3833877 intron enc + chr3L 3834078 intron enc + chr3L_6_3830001 chr3L_3830001 CanS-SH 1311 chr3L 4015668 4015762 chr3L 4015826 4015918 16 157 4.5 0.5 2.5 4.6 250 chr3L 4015668 intergenic not near genes chr3L 4015793 intergenic not near genes chr3L 4015918 intergenic not near genes chr3L_16_4015001 chr3L_4015001 CanS-SH 1312 chr3L 4146772 4146832 chr3L 4146924 4146989 16 156 0.5 8.5 4.5 2.9 217 chr3L 4146772 intergenic not near genes chr3L 4146880 intergenic not near genes chr3L 4146989 intergenic not near genes chr3L_16_4145001 chr3L_4145001 CanS-SH 1313 chr3L 4154179 4154225 chr3L 4154335 4154381 10 156 14.0 5.5 9.8 0.9 202 chr3L 4154179 exon nab - chr3L 4154280 intron nab - chr3L 4154381 exon nab - chr3L_10_4150001 chr3L_4150001 CanS-SH 1314 chr3L 4170080 4170167 chr3L 4170232 4170320 13 152 2.0 8.5 5.2 2.1 240 chr3L 4170080 intergenic Ero1L + chr3L 4170200 intergenic Ero1L + chr3L 4170320 intergenic Ero1L + chr3L_13_4170001 chr3L_4170001 CanS-SH 1315 chr3L 4229675 4229739 chr3L 4229845 4229909 29 170 15.0 10.5 12.8 2.1 234 chr3L 4229675 intron ImpL2 - chr3L 4229792 intron ImpL2 - chr3L 4229909 intron ImpL2 - chr3L_29_4225001 chr3L_4225001 CanS-SH 1316 chr3L 4675961 4676046 chr3L 4676117 4676202 13 156 7.5 6.5 7.0 1.6 241 chr3L 4675961 intron axo - chr3L 4676082 intron axo - chr3L 4676202 intron axo - chr3L_13_4675001 chr3L_4675001 CanS-SH 1317 chr3L 4754681 4754773 chr3L 4754832 4754924 21 151 9.5 8.0 8.8 2.1 243 chr3L 4754681 intron RhoGEF64C + chr3L 4754802 intron RhoGEF64C + chr3L 4754924 intron RhoGEF64C + chr3L_21_4750001 chr3L_4750001 CanS-SH 1318 chr3L 4774866 4774909 chr3L 4775040 4775082 15 174 8.0 8.5 8.2 1.6 216 chr3L 4774866 intron RhoGEF64C + chr3L 4774974 intron RhoGEF64C + chr3L 4775082 intron RhoGEF64C + chr3L_15_4770001 chr3L_4770001 CanS-SH 1319 chr3L 4858249 4858315 chr3L 4858414 4858480 12 165 9.0 9.5 9.2 1.2 231 chr3L 4858249 intergenic not near genes chr3L 4858364 intergenic not near genes chr3L 4858480 intergenic not near genes chr3L_12_4855001 chr3L_4855001 CanS-SH 1320 chr3L 4901059 4901105 chr3L 4907324 4907370 diver 13 6265 1.5 3.0 2.2 4.1 6311 chr3L 4901059 intergenic CG13704 + chr3L 4904214 intergenic not near genes chr3L 4907370 intergenic not near genes chr3L_13_4900001 chr3L_4900001 CanS-SH 1321 chr3L 5045395 5045431 chr3L 5050251 5050287 Doc 7 4856 11.5 9.5 10.5 0.6 4892 chr3L 5045395 5` UTR Con - chr3L 5047841 intron Con - chr3L 5050287 intron Con - chr3L_7_5045001 chr3L_5045001 CanS-SH 1322 chr3L 5103542 5103636 chr3L 5103697 5103793 10 155 4.0 0.0 2.0 3.3 251 chr3L 5103542 intergenic not near genes chr3L 5103668 intergenic not near genes chr3L 5103793 intergenic not near genes chr3L_10_5100001 chr3L_5100001 CanS-SH 1323 chr3L 5104418 5104457 chr3L 5124627 5124666 14 20209 15.5 5.5 10.5 1.2 20248 chr3L 5104418 intergenic not near genes chr3L 5114542 intergenic not near genes chr3L 5124666 intergenic not near genes chr3L_14_5110001 chr3L_5110001 CanS-SH 1324 chr3L 5127414 5127425 chr3L 5127571 5127581 6 157 6.5 5.5 6.0 0.9 167 chr3L 5127414 intergenic not near genes chr3L 5127498 intergenic not near genes chr3L 5127581 intergenic not near genes chr3L_6_5125001 chr3L_5125001 CanS-SH 1325 chr3L 5177590 5177647 chr3L 5177762 5177819 18 172 12.5 9.0 10.8 1.5 229 chr3L 5177590 intron shep - chr3L 5177704 intron shep - chr3L 5177819 intron shep - chr3L_18_5175001 chr3L_5175001 CanS-SH 1326 chr3L 5299098 5299172 chr3L 5306599 5306673 Quasimodo 12 7501 11.5 0.0 5.8 1.8 7575 chr3L 5299098 intergenic not near genes chr3L 5302886 intergenic not near genes chr3L 5306673 intergenic not near genes chr3L_12_5300001 chr3L_5300001 CanS-SH 1327 chr3L 5306603 5306675 chr3L 5306768 5306839 18 164 0.5 0.5 0.5 12.0 236 chr3L 5306603 intergenic not near genes chr3L 5306721 intergenic not near genes chr3L 5306839 intergenic not near genes chr3L_18_5305001 chr3L_5305001 CanS-SH 1328 chr3L 5312087 5312157 chr3L 5312240 5312313 14 156 4.5 7.5 6.0 2.0 226 chr3L 5312087 intergenic not near genes chr3L 5312200 intergenic not near genes chr3L 5312313 intergenic not near genes chr3L_14_5310001 chr3L_5310001 CanS-SH 1329 chr3L 5356326 5356406 chr3L 5356481 5356558 7 153 6.0 0.0 3.0 1.8 232 chr3L 5356326 intergenic lama - chr3L 5356442 intergenic Klp64D - chr3L 5356558 intergenic Klp64D - chr3L_7_5355001 chr3L_5355001 CanS-SH 1330 chr3L 5396417 5396496 chr3L 5396578 5396656 12 161 0.0 0.0 0.0 12.0 239 chr3L 5396417 intergenic not near genes chr3L 5396536 intergenic not near genes chr3L 5396656 intergenic not near genes chr3L_12_5395001 chr3L_5395001 CanS-SH 1331 chr3L 5399524 5399567 chr3L 5399686 5399729 8 162 3.5 0.0 1.8 2.9 205 chr3L 5399524 intergenic not near genes chr3L 5399626 intergenic not near genes chr3L 5399729 intergenic not near genes chr3L_8_5395001 chr3L_5395001 CanS-SH 1332 chr3L 5447652 5447691 chr3L 5447812 5447851 9 160 7.0 15.5 11.2 0.7 199 chr3L 5447652 intergenic not near genes chr3L 5447752 intergenic not near genes chr3L 5447851 intergenic not near genes chr3L_9_5445001 chr3L_5445001 CanS-SH 1333 chr3L 5485181 5485277 chr3L 5485563 5485659 17 382 9.0 5.0 7.0 2.1 478 chr3L 5485181 intergenic not near genes chr3L 5485420 intergenic not near genes chr3L 5485659 intergenic not near genes chr3L_17_5485001 chr3L_5485001 CanS-SH 1334 chr3L 5498317 5498385 chr3L 5498475 5498549 23 160 6.5 7.0 6.8 2.9 232 chr3L 5498317 exon blanks - chr3L 5498433 exon blanks - chr3L 5498549 exon blanks - chr3L_23_5495001 chr3L_5495001 CanS-SH 1335 chr3L 5537652 5537685 chr3L 5538069 5538102 jockey 15 417 20.0 9.0 14.5 1.0 450 chr3L 5537652 intergenic not near genes chr3L 5537877 intergenic not near genes chr3L 5538102 intergenic CG10625 - chr3L_15_5535001 chr3L_5535001 CanS-SH 1336 chr3L 5581408 5581481 chr3L 5581569 5581642 24 161 6.0 8.0 7.0 3.0 234 chr3L 5581408 intergenic not near genes chr3L 5581525 intergenic not near genes chr3L 5581642 intergenic not near genes chr3L_24_5580001 chr3L_5580001 CanS-SH 1337 chr3L 5613422 5613497 chr3L 5613624 5613699 19 202 6.5 8.5 7.5 2.2 277 chr3L 5613422 intergenic not near genes chr3L 5613560 intergenic not near genes chr3L 5613699 intergenic not near genes chr3L_19_5610001 chr3L_5610001 CanS-SH 1338 chr3L 5666266 5666317 chr3L 5666425 5666476 8 159 0.0 13.5 6.8 1.0 210 chr3L 5666266 intron sif + chr3L 5666371 intron sif + chr3L 5666476 intron sif + chr3L_8_5665001 chr3L_5665001 CanS-SH 1339 chr3L 5677148 5677197 chr3L 5677299 5677348 12 151 2.0 12.5 7.2 1.5 200 chr3L 5677148 intron sif + chr3L 5677248 intron sif + chr3L 5677348 intron sif + chr3L_12_5675001 chr3L_5675001 CanS-SH 1340 chr3L 5908009 5908103 chr3L 5908166 5908258 18 156 0.0 7.5 3.8 3.8 249 chr3L 5908009 intron CG13288 + chr3L 5908134 intron CG13288 + chr3L 5908258 intron CG13288 + chr3L_18_5905001 chr3L_5905001 CanS-SH 1341 chr3L 5909970 5910009 chr3L 5910286 5910325 pogo 14 316 19.5 13.0 16.2 0.8 355 chr3L 5909970 intron CG13288 + chr3L 5910148 intron CG13288 + chr3L 5910325 intron CG13288 + chr3L_14_5910001 chr3L_5910001 CanS-SH 1342 chr3L 5926255 5926291 chr3L 5926520 5926556 9 265 13.5 9.5 11.5 0.7 301 chr3L 5926255 intron Vap-33B + chr3L 5926406 intron Vap-33B + chr3L 5926556 intron Vap-33B + chr3L_9_5925001 chr3L_5925001 CanS-SH 1343 chr3L 5937157 5937198 chr3L 5937339 5937380 12 182 10.5 6.5 8.5 1.3 223 chr3L 5937157 intron CG33993 - chr3L 5937268 intron CG33993 - chr3L 5937380 intron CG33993 - chr3L_12_5935001 chr3L_5935001 CanS-SH 1344 chr3L 5983791 5983819 chr3L 5983987 5984015 11 196 9.5 0.0 4.8 1.9 224 chr3L 5983791 3` UTR CR45439 - chr3L 5983903 intergenic CR45439 -,CR45440 - chr3L 5984015 intergenic CR45440 -,CR45439 - chr3L_11_5980001 chr3L_5980001 CanS-SH 1345 chr3L 6001619 6001662 chr3L 6004394 6004437 jockey 12 2775 3.5 7.5 5.5 1.8 2818 chr3L 6001619 intron PVRAP + chr3L 6003028 intron PVRAP + chr3L 6004437 intron PVRAP + chr3L_12_6000001 chr3L_6000001 CanS-SH 1346 chr3L 6040196 6040239 chr3L 6040351 6040394 6 155 14.0 1.5 7.8 0.7 198 chr3L 6040196 intergenic Jon65Aiv + chr3L 6040295 intergenic Jon65Aiv + chr3L 6040394 intergenic Jon65Aiv + chr3L_6_6040001 chr3L_6040001 CanS-SH 1347 chr3L 6040263 6040301 chr3L 6042721 6042759 Doc 13 2458 6.0 7.0 6.5 1.7 2496 chr3L 6040263 intergenic Jon65Aiv + chr3L 6041511 intergenic not near genes chr3L 6042759 intergenic not near genes chr3L_13_6040001 chr3L_6040001 CanS-SH 1348 chr3L 6052062 6052137 chr3L 6052223 6052298 8 161 6.5 4.5 5.5 1.2 236 chr3L 6052062 intergenic Jon65Aii +,Jon65Aiii + chr3L 6052180 intergenic Jon65Aii +,Jon65Aiii + chr3L 6052298 intergenic Jon65Aii + chr3L_8_6050001 chr3L_6050001 CanS-SH 1349 chr3L 6052598 6052648 chr3L 6052758 6052808 7 160 7.0 12.0 9.5 0.7 210 chr3L 6052598 exon Jon65Aii + chr3L 6052703 intron Jon65Aii + chr3L 6052808 exon Jon65Aii + chr3L_7_6050001 chr3L_6050001 CanS-SH 1350 chr3L 6064942 6065045 chr3L 6065094 6065201 14 153 6.0 5.0 5.5 2.2 259 chr3L 6064942 intergenic not near genes chr3L 6065072 intergenic not near genes chr3L 6065201 intergenic not near genes chr3L_14_6065001 chr3L_6065001 CanS-SH 1351 chr3L 6119081 6119163 chr3L 6119245 6119327 21 164 6.0 9.5 7.8 2.4 246 chr3L 6119081 exon Ets65A + chr3L 6119204 intron Ets65A + chr3L 6119327 intron Ets65A + chr3L_21_6115001 chr3L_6115001 CanS-SH 1352 chr3L 6155645 6155708 chr3L 6155806 6155869 27 161 12.5 4.0 8.2 2.9 224 chr3L 6155645 intergenic CR45421 - chr3L 6155757 intergenic not near genes chr3L 6155869 intergenic not near genes chr3L_27_6155001 chr3L_6155001 CanS-SH 1353 chr3L 6220856 6220889 chr3L 6230083 6230116 roo 11 9227 17.0 8.5 12.8 0.8 9260 chr3L 6220856 5` UTR pncr008:3L + chr3L 6225486 intergenic not near genes chr3L 6230116 intergenic not near genes chr3L_11_6225001 chr3L_6225001 CanS-SH 1354 chr3L 6334946 6334975 chr3L 6335492 6335521 297 6 546 11.0 12.0 11.5 0.5 575 chr3L 6334946 intron CG13300 - chr3L 6335234 intron CG13300 - chr3L 6335521 intron CG13300 - chr3L_6_6335001 chr3L_6335001 CanS-SH 1355 chr3L 6353334 6353393 chr3L 6353489 6353548 13 155 7.5 8.0 7.8 1.5 214 chr3L 6353334 intergenic not near genes chr3L 6353441 intergenic not near genes chr3L 6353548 intergenic not near genes chr3L_13_6350001 chr3L_6350001 CanS-SH 1356 chr3L 6369692 6369737 chr3L 6369871 6369916 12 179 14.5 4.5 9.5 1.1 224 chr3L 6369692 intergenic CR45419 - chr3L 6369804 intergenic CR45419 - chr3L 6369916 intergenic CR45419 - chr3L_12_6365001 chr3L_6365001 CanS-SH 1357 chr3L 6503342 6503435 chr3L 6503510 6503603 12 168 6.0 8.5 7.2 1.5 261 chr3L 6503342 intron sfl + chr3L 6503472 intron sfl + chr3L 6503603 intron sfl + chr3L_12_6500001 chr3L_6500001 CanS-SH 1358 chr3L 6573589 6573679 chr3L 6573767 6573857 22 178 5.5 5.5 5.5 3.4 268 chr3L 6573589 intron,intron CG18769 +,jv - chr3L 6573723 intron,intron CG18769 +,jv - chr3L 6573857 intron,intron CG18769 +,jv - chr3L_22_6570001 chr3L_6570001 CanS-SH 1359 chr3L 6620537 6620556 chr3L 6621052 6621071 Rt1c 7 515 23.0 12.0 17.5 0.4 534 chr3L 6620537 intergenic not near genes chr3L 6620804 intergenic not near genes chr3L 6621071 intergenic not near genes chr3L_7_6620001 chr3L_6620001 CanS-SH 1360 chr3L 6642899 6642902 chr3L 6643056 6643059 4 157 0.0 9.0 4.5 0.7 160 chr3L 6642899 intergenic CR45239 + chr3L 6642979 intergenic CR45239 + chr3L 6643059 intergenic CR45239 + chr3L_4_6640001 chr3L_6640001 CanS-SH 1361 chr3L 6706383 6706443 chr3L 6706537 6706597 20 154 3.5 8.5 6.0 2.9 214 chr3L 6706383 intron CG8519 + chr3L 6706490 intron CG8519 + chr3L 6706597 intron CG8519 + chr3L_20_6705001 chr3L_6705001 CanS-SH 1362 chr3L 6726787 6726824 chr3L 6726938 6726975 8 151 0.0 12.0 6.0 1.1 188 chr3L 6726787 intergenic not near genes chr3L 6726881 intergenic not near genes chr3L 6726975 intergenic not near genes chr3L_8_6725001 chr3L_6725001 CanS-SH 1363 chr3L 6781049 6781154 chr3L 6783138 6783239 Doc 14 2086 4.5 0.5 2.5 4.0 2190 chr3L 6781049 intergenic not near genes chr3L 6782144 intergenic not near genes chr3L 6783239 intergenic not near genes chr3L_14_6780001 chr3L_6780001 CanS-SH 1364 chr3L 6820596 6820629 chr3L 6820754 6820787 16 158 7.0 15.5 11.2 1.3 191 chr3L 6820596 intergenic not near genes chr3L 6820692 intergenic not near genes chr3L 6820787 intergenic not near genes chr3L_16_6820001 chr3L_6820001 CanS-SH 1365 chr3L 6835867 6835924 chr3L 6836020 6836077 15 153 8.5 11.0 9.8 1.4 210 chr3L 6835867 intergenic not near genes chr3L 6835972 intergenic not near genes chr3L 6836077 intergenic not near genes chr3L_15_6835001 chr3L_6835001 CanS-SH 1366 chr3L 6847441 6847512 chr3L 6847596 6847667 5 155 4.0 2.0 3.0 1.2 226 chr3L 6847441 intergenic not near genes chr3L 6847554 intergenic not near genes chr3L 6847667 intergenic not near genes chr3L_5_6845001 chr3L_6845001 CanS-SH 1367 chr3L 6855873 6855904 chr3L 6860732 6860763 Doc 7 4859 6.5 7.5 7.0 0.9 4890 chr3L 6855873 intergenic not near genes chr3L 6858318 intergenic not near genes chr3L 6860763 intergenic not near genes chr3L_7_6855001 chr3L_6855001 CanS-SH 1368 chr3L 6865430 6865445 chr3L 6865586 6865601 6 156 7.0 8.0 7.5 0.7 171 chr3L 6865430 intergenic CR45115 - chr3L 6865516 3` UTR CR45115 - chr3L 6865601 3` UTR CR45115 - chr3L_6_6865001 chr3L_6865001 CanS-SH 1369 chr3L 6868641 6868741 chr3L 6868796 6868894 31 153 1.5 6.5 4.0 6.2 253 chr3L 6868641 intergenic not near genes chr3L 6868768 intergenic not near genes chr3L 6868894 intergenic not near genes chr3L_31_6865001 chr3L_6865001 CanS-SH 1370 chr3L 6887465 6887495 chr3L 6895032 6895062 roo 9 7567 17.0 13.0 15.0 0.6 7597 chr3L 6887465 intergenic not near genes chr3L 6891264 intergenic not near genes chr3L 6895062 intergenic not near genes chr3L_9_6890001 chr3L_6890001 CanS-SH 1371 chr3L 6934281 6934314 chr3L 6934467 6934500 9 186 15.5 7.5 11.5 0.7 219 chr3L 6934281 exon CG14820 + chr3L 6934390 intron CG14820 + chr3L 6934500 exon CG14820 + chr3L_9_6930001 chr3L_6930001 CanS-SH 1372 chr3L 6981912 6981937 chr3L 6982141 6982166 8 229 6.0 10.5 8.2 0.9 254 chr3L 6981912 intergenic not near genes chr3L 6982039 intergenic not near genes chr3L 6982166 intergenic not near genes chr3L_8_6980001 chr3L_6980001 CanS-SH 1373 chr3L 7001916 7001975 chr3L 7002112 7002171 8 196 10.5 8.5 9.5 0.8 255 chr3L 7001916 intron Mp + chr3L 7002044 intron Mp + chr3L 7002171 intron Mp + chr3L_8_7000001 chr3L_7000001 CanS-SH 1374 chr3L 7033104 7033178 chr3L 7033259 7033334 12 156 12.0 8.5 10.2 1.1 230 chr3L 7033104 intron Mp + chr3L 7033219 intron Mp + chr3L 7033334 intron Mp + chr3L_12_7030001 chr3L_7030001 CanS-SH 1375 chr3L 7041850 7041923 chr3L 7042003 7042076 12 153 2.5 6.5 4.5 2.2 226 chr3L 7041850 intron Mp + chr3L 7041963 intron Mp + chr3L 7042076 intron Mp + chr3L_12_7040001 chr3L_7040001 CanS-SH 1376 chr3L 7085104 7085183 chr3L 7085263 7085342 30 159 7.5 6.0 6.8 3.8 238 chr3L 7085104 intergenic not near genes chr3L 7085223 intergenic not near genes chr3L 7085342 intergenic not near genes chr3L_30_7085001 chr3L_7085001 CanS-SH 1377 chr3L 7086765 7086854 chr3L 7086919 7087009 14 155 3.5 4.5 4.0 2.8 244 chr3L 7086765 intergenic Cpr65Ea - chr3L 7086887 intergenic Cpr65Ea - chr3L 7087009 intergenic Cpr65Ea - chr3L_14_7085001 chr3L_7085001 CanS-SH 1378 chr3L 7164490 7164571 chr3L 7164646 7164727 20 156 4.0 4.5 4.2 3.8 237 chr3L 7164490 exon Dscam2 - chr3L 7164608 intron Dscam2 - chr3L 7164727 intron Dscam2 - chr3L_20_7160001 chr3L_7160001 CanS-SH 1379 chr3L 7173959 7174049 chr3L 7174127 7174214 16 167 10.0 0.5 5.2 2.6 255 chr3L 7173959 intron Dscam2 - chr3L 7174086 intron Dscam2 - chr3L 7174214 intron Dscam2 - chr3L_16_7170001 chr3L_7170001 CanS-SH 1380 chr3L 7185147 7185190 chr3L 7185313 7185356 8 166 15.0 8.0 11.5 0.6 209 chr3L 7185147 intron Dscam2 - chr3L 7185252 intron Dscam2 - chr3L 7185356 intron Dscam2 - chr3L_8_7185001 chr3L_7185001 CanS-SH 1381 chr3L 7233315 7233349 chr3L 7233471 7233505 15 156 0.0 12.5 6.2 2.1 190 chr3L 7233315 intergenic not near genes chr3L 7233410 intergenic not near genes chr3L 7233505 intergenic not near genes chr3L_15_7230001 chr3L_7230001 CanS-SH 1382 chr3L 7236558 7236584 chr3L 7236809 7236835 8 251 15.5 5.0 10.2 0.7 277 chr3L 7236558 intergenic CG14829 - chr3L 7236696 intergenic CG14829 - chr3L 7236835 3` UTR CG14829 - chr3L_8_7235001 chr3L_7235001 CanS-SH 1383 chr3L 7274655 7274738 chr3L 7274834 7274917 14 179 5.0 11.0 8.0 1.6 262 chr3L 7274655 exon unc-13-4A - chr3L 7274786 intron unc-13-4A - chr3L 7274917 intron unc-13-4A - chr3L_14_7270001 chr3L_7270001 CanS-SH 1384 chr3L 7276085 7276169 chr3L 7276239 7276321 14 154 7.0 7.0 7.0 1.8 236 chr3L 7276085 intron unc-13-4A - chr3L 7276203 intron unc-13-4A - chr3L 7276321 intron unc-13-4A - chr3L_14_7275001 chr3L_7275001 CanS-SH 1385 chr3L 7285383 7285469 chr3L 7285536 7285622 15 153 0.0 2.0 1.0 7.5 239 chr3L 7285383 intron unc-13-4A - chr3L 7285502 intron unc-13-4A - chr3L 7285622 intron unc-13-4A - chr3L_15_7285001 chr3L_7285001 CanS-SH 1386 chr3L 7292029 7292079 chr3L 7292184 7292234 20 155 10.5 5.0 7.8 2.3 205 chr3L 7292029 intron unc-13-4A - chr3L 7292132 intron unc-13-4A - chr3L 7292234 intron unc-13-4A - chr3L_20_7290001 chr3L_7290001 CanS-SH 1387 chr3L 7355779 7355816 chr3L 7363611 7363648 14 7832 51.0 38.5 44.8 0.3 7869 chr3L 7355779 exon CTCF - chr3L 7359714 exon pst - chr3L 7363648 exon Sec63 + chr3L_14_7355001 chr3L_7355001 CanS-SH 1388 chr3L 7377249 7377345 chr3L 7380429 7380519 297 14 3179 6.5 5.5 6.0 2.0 3270 chr3L 7377249 intron SMSr - chr3L 7378884 intron SMSr - chr3L 7380519 intron SMSr - chr3L_14_7375001 chr3L_7375001 CanS-SH 1389 chr3L 7447882 7447942 chr3L 7448061 7448121 15 179 7.5 7.0 7.2 1.8 239 chr3L 7447882 intron CG42458 + chr3L 7448002 intron CG42458 + chr3L 7448121 exon CG42458 + chr3L_15_7445001 chr3L_7445001 CanS-SH 1390 chr3L 7498696 7498729 chr3L 7503548 7503581 F-element 9 4852 15.5 10.0 12.8 0.7 4885 chr3L 7498696 5` UTR CG8539 - chr3L 7501138 intergenic not near genes chr3L 7503581 intergenic not near genes chr3L_9_7500001 chr3L_7500001 CanS-SH 1391 chr3L 7505382 7505442 chr3L 7505534 7505594 12 152 4.5 8.0 6.2 1.7 212 chr3L 7505382 intergenic CG7548 - chr3L 7505488 intergenic CG7548 - chr3L 7505594 3` UTR CG7548 - chr3L_12_7505001 chr3L_7505001 CanS-SH 1392 chr3L 7508604 7508674 chr3L 7508763 7508833 26 159 13.0 0.0 6.5 3.5 229 chr3L 7508604 intergenic not near genes chr3L 7508718 intergenic not near genes chr3L 7508833 intergenic not near genes chr3L_26_7505001 chr3L_7505001 CanS-SH 1393 chr3L 7532848 7532877 chr3L 7533003 7533030 6 154 2.0 8.0 5.0 1.0 182 chr3L 7532848 intron lqf + chr3L 7532939 intron lqf + chr3L 7533030 intron lqf + chr3L_6_7530001 chr3L_7530001 CanS-SH 1394 chr3L 7572216 7572244 chr3L 7572378 7572406 6 162 13.5 7.0 10.2 0.5 190 chr3L 7572216 intergenic not near genes chr3L 7572311 intergenic not near genes chr3L 7572406 intergenic not near genes chr3L_6_7570001 chr3L_7570001 CanS-SH 1395 chr3L 7591085 7591153 chr3L 7591251 7591319 21 166 14.5 9.5 12.0 1.6 234 chr3L 7591085 intergenic CG7716 - chr3L 7591202 intergenic CG7716 - chr3L 7591319 intergenic CG7716 - chr3L_21_7590001 chr3L_7590001 CanS-SH 1396 chr3L 7617626 7617705 chr3L 7617810 7617890 7 184 4.0 7.5 5.8 1.0 264 chr3L 7617626 intron CG33275 + chr3L 7617758 intron CG33275 + chr3L 7617890 intron CG33275 + chr3L_7_7615001 chr3L_7615001 CanS-SH 1397 chr3L 7752482 7752509 chr3L 7752916 7752943 15 434 14.5 12.0 13.2 1.1 461 chr3L 7752482 intron CG32373 + chr3L 7752712 intron CG32373 + chr3L 7752943 intron CG32373 + chr3L_15_7750001 chr3L_7750001 CanS-SH 1398 chr3L 7775444 7775505 chr3L 7775619 7775680 6 175 10.5 5.5 8.0 0.7 236 chr3L 7775444 intron Clk - chr3L 7775562 5` UTR Clk - chr3L 7775680 intergenic Clk - chr3L_6_7775001 chr3L_7775001 CanS-SH 1399 chr3L 7793651 7793690 chr3L 7800778 7800817 297 13 7127 20.0 12.0 16.0 0.8 7166 chr3L 7793651 intron CG32369 - chr3L 7797234 intron CG32369 - chr3L 7800817 intron CG32369 - chr3L_13_7795001 chr3L_7795001 CanS-SH 1400 chr3L 7801480 7801550 chr3L 7801636 7801706 14 156 6.0 6.5 6.2 1.9 226 chr3L 7801480 intron CG32369 - chr3L 7801593 intron CG32369 - chr3L 7801706 intron CG32369 - chr3L_14_7800001 chr3L_7800001 CanS-SH 1401 chr3L 7814642 7814702 chr3L 7814802 7814862 17 160 11.0 12.0 11.5 1.4 220 chr3L 7814642 3` UTR Pdp1 - chr3L 7814752 3` UTR Pdp1 - chr3L 7814862 3` UTR Pdp1 - chr3L_17_7810001 chr3L_7810001 CanS-SH 1402 chr3L 7867741 7867800 chr3L 7867894 7867953 16 153 10.0 18.5 14.2 1.1 212 chr3L 7867741 intergenic Pdp1 - chr3L 7867847 intergenic Pdp1 - chr3L 7867953 intergenic not near genes chr3L_16_7865001 chr3L_7865001 CanS-SH 1403 chr3L 7869653 7869670 chr3L 7869814 7869831 8 161 11.0 13.0 12.0 0.6 178 chr3L 7869653 exon CG32365 + chr3L 7869742 exon CG32365 + chr3L 7869831 exon CG32365 + chr3L_8_7865001 chr3L_7865001 CanS-SH 1404 chr3L 7876028 7876100 chr3L 7876180 7876254 5 152 5.0 0.0 2.5 1.4 226 chr3L 7876028 intron CG32365 + chr3L 7876141 intron CG32365 + chr3L 7876254 intron CG32365 + chr3L_5_7875001 chr3L_7875001 CanS-SH 1405 chr3L 7885075 7885083 chr3L 7885241 7885249 5 166 20.5 0.0 10.2 0.4 174 chr3L 7885075 intron CG32365 + chr3L 7885162 intron CG32365 + chr3L 7885249 intron CG32365 + chr3L_5_7885001 chr3L_7885001 CanS-SH 1406 chr3L 7916773 7916806 chr3L 7926019 7926052 roo 12 9246 16.5 9.0 12.8 0.9 9279 chr3L 7916773 3` UTR syd - chr3L 7921412 intron syd - chr3L 7926052 3` UTR syd - chr3L_12_7920001 chr3L_7920001 CanS-SH 1407 chr3L 7964624 7964717 chr3L 7964832 7964925 15 208 7.5 4.0 5.8 2.2 301 chr3L 7964624 intergenic not near genes chr3L 7964774 intergenic not near genes chr3L 7964925 intergenic not near genes chr3L_15_7960001 chr3L_7960001 CanS-SH 1408 chr3L 7985303 7985343 chr3L 7987706 7987746 NOF 14 2403 19.5 8.0 13.8 0.9 2443 chr3L 7985303 intron nmo + chr3L 7986524 intron nmo + chr3L 7987746 intron nmo + chr3L_14_7985001 chr3L_7985001 CanS-SH 1409 chr3L 8026419 8026512 chr3L 8026655 8026749 20 237 9.0 6.0 7.5 2.4 330 chr3L 8026419 intron nmo + chr3L 8026584 intron nmo + chr3L 8026749 intron nmo + chr3L_20_8025001 chr3L_8025001 CanS-SH 1410 chr3L 8062772 8062846 chr3L 8062926 8063000 19 154 13.0 10.0 11.5 1.5 228 chr3L 8062772 intergenic not near genes chr3L 8062886 intergenic not near genes chr3L 8063000 intergenic not near genes chr3L_19_8060001 chr3L_8060001 CanS-SH 1411 chr3L 8064602 8064671 chr3L 8064813 8064884 10 212 9.5 12.0 10.8 0.8 282 chr3L 8064602 intron Ect4 + chr3L 8064743 intron Ect4 + chr3L 8064884 intron Ect4 + chr3L_10_8060001 chr3L_8060001 CanS-SH 1412 chr3L 8081352 8081441 chr3L 8081510 8081599 18 158 10.0 6.0 8.0 2.0 247 chr3L 8081352 intron Ect4 + chr3L 8081476 intron Ect4 + chr3L 8081599 intron Ect4 + chr3L_18_8080001 chr3L_8080001 CanS-SH 1413 chr3L 8149690 8149775 chr3L 8149871 8149956 22 181 6.0 9.5 7.8 2.5 266 chr3L 8149690 intron CG13676 - chr3L 8149823 intron CG13676 - chr3L 8149956 intron CG13676 - chr3L_22_8145001 chr3L_8145001 CanS-SH 1414 chr3L 8208061 8208100 chr3L 8208268 8208307 15 207 14.0 3.5 8.8 1.5 246 chr3L 8208061 intergenic not near genes chr3L 8208184 intergenic not near genes chr3L 8208307 intergenic not near genes chr3L_15_8205001 chr3L_8205001 CanS-SH 1415 chr3L 8233517 8233535 chr3L 8238854 8238872 Rt1a 7 5337 14.5 14.0 14.2 0.5 5355 chr3L 8233517 intron CG7213 - chr3L 8236194 intron CG7213 - chr3L 8238872 intron,intron CG7213 -,Dscam4 + chr3L_7_8235001 chr3L_8235001 CanS-SH 1416 chr3L 8295733 8295761 chr3L 8295966 8295994 16 233 14.5 8.0 11.2 1.3 261 chr3L 8295733 intergenic CG7201 - chr3L 8295864 intergenic not near genes chr3L 8295994 intergenic not near genes chr3L_16_8295001 chr3L_8295001 CanS-SH 1417 chr3L 8376583 8376677 chr3L 8376756 8376850 16 173 0.0 9.5 4.8 2.8 267 chr3L 8376583 intron ImpE1 + chr3L 8376716 intron ImpE1 + chr3L 8376850 intron ImpE1 + chr3L_16_8375001 chr3L_8375001 CanS-SH 1418 chr3L 8383916 8383999 chr3L 8384072 8384155 11 156 7.5 13.0 10.2 1.0 239 chr3L 8383916 intron ImpE1 + chr3L 8384036 intron ImpE1 + chr3L 8384155 intron ImpE1 + chr3L_11_8380001 chr3L_8380001 CanS-SH 1419 chr3L 8413791 8413867 chr3L 8413945 8414029 21 155 7.5 1.0 4.2 4.0 238 chr3L 8413791 intron,3` UTR Exo70 +,mtrm + chr3L 8413910 intron,3` UTR Exo70 +,mtrm + chr3L 8414029 intron,3` UTR Exo70 +,mtrm + chr3L_21_8410001 chr3L_8410001 CanS-SH 1420 chr3L 8442897 8442906 chr3L 8443048 8443057 5 151 2.5 24.0 13.2 0.4 160 chr3L 8442897 intergenic CG6983 - chr3L 8442977 intergenic CG6983 - chr3L 8443057 3` UTR CG6983 - chr3L_5_8440001 chr3L_8440001 CanS-SH 1421 chr3L 8443518 8443583 chr3L 8443675 8443740 24 157 7.0 10.5 8.8 2.4 222 chr3L 8443518 3` UTR CG6983 - chr3L 8443629 3` UTR CG6983 - chr3L 8443740 3` UTR CG6983 - chr3L_24_8440001 chr3L_8440001 CanS-SH 1422 chr3L 8456407 8456461 chr3L 8456573 8456627 14 166 14.0 10.5 12.2 1.1 220 chr3L 8456407 intron Gug + chr3L 8456517 intron Gug + chr3L 8456627 intron Gug + chr3L_14_8455001 chr3L_8455001 CanS-SH 1423 chr3L 8481708 8481746 chr3L 8490942 8490980 roo 15 9234 12.5 7.5 10.0 1.4 9272 chr3L 8481708 intron CG43163 - chr3L 8486344 intron CG43163 - chr3L 8490980 intron CG43163 - chr3L_15_8485001 chr3L_8485001 CanS-SH 1424 chr3L 8497827 8497917 chr3L 8498008 8498098 23 181 6.5 0.0 3.2 5.5 271 chr3L 8497827 intron CG43163 - chr3L 8497962 intron CG43163 - chr3L 8498098 intron CG43163 - chr3L_23_8495001 chr3L_8495001 CanS-SH 1425 chr3L 8498223 8498259 chr3L 8505762 8505798 blood 13 7539 0.0 8.0 4.0 2.6 7575 chr3L 8498223 intron CG43163 - chr3L 8502010 intron CG43163 - chr3L 8505798 intron CG43163 - chr3L_13_8500001 chr3L_8500001 CanS-SH 1426 chr3L 8576199 8576281 chr3L 8576368 8576450 10 169 0.0 4.0 2.0 3.3 251 chr3L 8576199 intergenic CG6638 - chr3L 8576324 intergenic CG6638 -,CG43078 + chr3L 8576450 intergenic CG43078 +,CG6638 - chr3L_10_8575001 chr3L_8575001 CanS-SH 1427 chr3L 8791214 8791247 chr3L 8796709 8796742 I-element 17 5495 16.0 13.5 14.8 1.1 5528 chr3L 8791214 exon Fhos + chr3L 8793978 intron Fhos + chr3L 8796742 intron Fhos + chr3L_17_8790001 chr3L_8790001 CanS-SH 1428 chr3L 9047070 9047111 chr3L 9047232 9047273 10 162 0.0 14.5 7.2 1.2 203 chr3L 9047070 intergenic CG5144 + chr3L 9047172 intergenic CG5144 + chr3L 9047273 intergenic CG5144 + chr3L_10_9045001 chr3L_9045001 CanS-SH 1429 chr3L 9068404 9068495 chr3L 9068561 9068652 23 157 9.0 10.5 9.8 2.1 248 chr3L 9068404 3` UTR CG4911 - chr3L 9068528 3` UTR CG4911 - chr3L 9068652 3` UTR CG4911 - chr3L_23_9065001 chr3L_9065001 CanS-SH 1430 chr3L 9076861 9076904 chr3L 9084496 9084539 412 12 7635 11.5 7.0 9.2 1.2 7678 chr3L 9076861 exon Tequila + chr3L 9080700 intron Tequila + chr3L 9084539 exon Tequila + chr3L_12_9080001 chr3L_9080001 CanS-SH 1431 chr3L 9128136 9128191 chr3L 9128296 9128351 20 160 13.5 12.0 12.8 1.4 215 chr3L 9128136 intron bol - chr3L 9128244 intron bol - chr3L 9128351 intron bol - chr3L_20_9125001 chr3L_9125001 CanS-SH 1432 chr3L 9130493 9130534 chr3L 9134329 9134370 412 10 3836 13.0 7.0 10.0 0.9 3877 chr3L 9130493 intergenic bol - chr3L 9132432 intergenic not near genes chr3L 9134370 intergenic Dhpr + chr3L_10_9130001 chr3L_9130001 CanS-SH 1433 chr3L 9164637 9164659 chr3L 9166179 9166201 hobo 12 1542 23.5 0.0 11.8 0.9 1564 chr3L 9164637 intron Rdl - chr3L 9165419 intron Rdl - chr3L 9166201 intron Rdl - chr3L_12_9165001 chr3L_9165001 CanS-SH 1434 chr3L 9215106 9215202 chr3L 9215279 9215378 16 173 8.0 4.5 6.2 2.2 272 chr3L 9215106 3` UTR CG4476 + chr3L 9215242 3` UTR CG4476 + chr3L 9215378 intergenic CG4476 + chr3L_16_9215001 chr3L_9215001 CanS-SH 1435 chr3L 9219189 9219216 chr3L 9219935 9219963 jockey 7 747 12.5 8.5 10.5 0.6 774 chr3L 9219189 intergenic not near genes chr3L 9219576 intergenic not near genes chr3L 9219963 intergenic not near genes chr3L_7_9215001 chr3L_9215001 CanS-SH 1436 chr3L 9221281 9221346 chr3L 9221445 9221510 25 164 3.5 5.0 4.2 4.8 229 chr3L 9221281 intergenic not near genes chr3L 9221396 intergenic not near genes chr3L 9221510 intergenic not near genes chr3L_25_9220001 chr3L_9220001 CanS-SH 1437 chr3L 9270555 9270647 chr3L 9278381 9278473 roo 17 7826 6.5 4.5 5.5 2.6 7918 chr3L 9270555 intron GluRIB + chr3L 9274514 intron GluRIB + chr3L 9278473 exon GluRIB + chr3L_17_9270001 chr3L_9270001 CanS-SH 1438 chr3L 9302408 9302483 chr3L 9302568 9302643 8 160 5.5 6.0 5.8 1.2 235 chr3L 9302408 intergenic not near genes chr3L 9302526 intergenic not near genes chr3L 9302643 intergenic not near genes chr3L_8_9300001 chr3L_9300001 CanS-SH 1439 chr3L 9312655 9312732 chr3L 9312808 9312885 22 153 8.5 9.0 8.8 2.2 230 chr3L 9312655 intergenic not near genes chr3L 9312770 intergenic not near genes chr3L 9312885 intergenic not near genes chr3L_22_9310001 chr3L_9310001 CanS-SH 1440 chr3L 9348392 9348488 chr3L 9348969 9349058 10 574 2.0 0.0 1.0 5.0 666 chr3L 9348392 intergenic PGRP-LC + chr3L 9348725 intergenic PGRP-LC + chr3L 9349058 intergenic not near genes chr3L_10_9345001 chr3L_9345001 CanS-SH 1441 chr3L 9359524 9359601 chr3L 9359690 9359766 19 166 12.0 7.0 9.5 1.8 242 chr3L 9359524 3` UTR CG32039 + chr3L 9359645 3` UTR CG32039 + chr3L 9359766 3` UTR CG32039 + chr3L_19_9355001 chr3L_9355001 CanS-SH 1442 chr3L 9369264 9369351 chr3L 9369455 9369539 28 190 8.5 4.5 6.5 3.7 275 chr3L 9369264 3` UTR CG4452 + chr3L 9369402 intron CG4452 + chr3L 9369539 intron CG4452 + chr3L_28_9365001 chr3L_9365001 CanS-SH 1443 chr3L 9443501 9443532 chr3L 9445352 9445383 S-element 6 1851 5.0 6.0 5.5 0.9 1882 chr3L 9443501 intron CG33926 + chr3L 9444442 intron CG33926 + chr3L 9445383 intron CG33926 + chr3L_6_9440001 chr3L_9440001 CanS-SH 1444 chr3L 9501639 9501732 chr3L 9502200 9502270 roo 7 555 5.5 0.0 2.8 1.8 631 chr3L 9501639 intron path - chr3L 9501954 intron path - chr3L 9502270 intron path - chr3L_7_9500001 chr3L_9500001 CanS-SH 1445 chr3L 9506645 9506688 chr3L 9506803 9506847 19 159 6.5 14.5 10.5 1.7 202 chr3L 9506645 intergenic CG3408 - chr3L 9506746 intergenic CG3408 - chr3L 9506847 3` UTR CG3408 - chr3L_19_9505001 chr3L_9505001 CanS-SH 1446 chr3L 9510836 9510943 chr3L 9511004 9511097 20 167 2.5 4.0 3.2 4.8 261 chr3L 9510836 intron RpS9 - chr3L 9510966 intron RpS9 - chr3L 9511097 exon RpS9 - chr3L_20_9510001 chr3L_9510001 CanS-SH 1447 chr3L 9513396 9513457 chr3L 9513558 9513619 16 162 4.0 10.5 7.2 2.0 223 chr3L 9513396 exon CG33702 - chr3L 9513508 intergenic CG33702 - chr3L 9513619 intergenic CG33702 -,CG33700 - chr3L_16_9510001 chr3L_9510001 CanS-SH 1448 chr3L 9526430 9526458 chr3L 9528185 9528213 Doc 15 1755 14.0 8.5 11.2 1.2 1783 chr3L 9526430 intergenic not near genes chr3L 9527322 intergenic not near genes chr3L 9528213 intergenic not near genes chr3L_15_9525001 chr3L_9525001 CanS-SH 1449 chr3L 9532477 9532489 chr3L 9532648 9532660 6 171 0.0 14.5 7.2 0.7 183 chr3L 9532477 intergenic not near genes chr3L 9532568 intergenic not near genes chr3L 9532660 intergenic not near genes chr3L_6_9530001 chr3L_9530001 CanS-SH 1450 chr3L 9533698 9533767 chr3L 9541333 9541402 412 5 7635 9.5 11.5 10.5 0.4 7704 chr3L 9533698 intergenic not near genes chr3L 9537550 intergenic not near genes chr3L 9541402 intergenic not near genes chr3L_5_9535001 chr3L_9535001 CanS-SH 1451 chr3L 9571845 9571881 chr3L 9572268 9572304 jockey 10 423 14.5 9.5 12.0 0.8 459 chr3L 9571845 intron CG42673 + chr3L 9572074 intron CG42673 + chr3L 9572304 intron CG42673 + chr3L_10_9570001 chr3L_9570001 CanS-SH 1452 chr3L 9575848 9575891 chr3L 9581001 9581045 jockey 11 5153 5.5 8.0 6.8 1.4 5197 chr3L 9575848 intron CG42673 + chr3L 9578446 intron CG42673 + chr3L 9581045 intron CG42673 + chr3L_11_9575001 chr3L_9575001 CanS-SH 1453 chr3L 9637795 9637876 chr3L 9637952 9638033 16 157 6.0 8.5 7.2 2.0 238 chr3L 9637795 exon fry - chr3L 9637914 intron fry - chr3L 9638033 intron fry - chr3L_16_9635001 chr3L_9635001 CanS-SH 1454 chr3L 9638972 9639041 chr3L 9639136 9639201 7 162 0.0 16.0 8.0 0.8 229 chr3L 9638972 intron,3` UTR fry -,CG8329 + chr3L 9639086 intron fry - chr3L 9639201 intron fry - chr3L_7_9635001 chr3L_9635001 CanS-SH 1455 chr3L 9665767 9665853 chr3L 9666058 9666144 17 291 11.0 10.0 10.5 1.5 377 chr3L 9665767 intron fry - chr3L 9665956 intron fry - chr3L 9666144 intron fry - chr3L_17_9665001 chr3L_9665001 CanS-SH 1456 chr3L 9754638 9754683 chr3L 9754797 9754842 4 159 10.0 0.0 5.0 0.7 204 chr3L 9754638 intron CG42268 - chr3L 9754740 intron CG42268 - chr3L 9754842 intron CG42268 - chr3L_4_9750001 chr3L_9750001 CanS-SH 1457 chr3L 9775293 9775391 chr3L 9775727 9775826 10 434 8.5 10.5 9.5 1.0 533 chr3L 9775293 intron CG8177 + chr3L 9775560 intron CG8177 + chr3L 9775826 intron CG8177 + chr3L_10_9775001 chr3L_9775001 CanS-SH 1458 chr3L 9831644 9831714 chr3L 9831799 9831870 16 156 6.0 9.0 7.5 1.9 226 chr3L 9831644 intron CG43897 + chr3L 9831757 intron CG43897 + chr3L 9831870 intron CG43897 + chr3L_16_9830001 chr3L_9830001 CanS-SH 1459 chr3L 9834680 9834757 chr3L 9834847 9834924 30 167 11.5 6.0 8.8 3.1 244 chr3L 9834680 3` UTR I-2 - chr3L 9834802 3` UTR I-2 - chr3L 9834924 3` UTR I-2 - chr3L_30_9830001 chr3L_9830001 CanS-SH 1460 chr3L 9846366 9846379 chr3L 9846532 9846545 5 166 11.5 17.0 14.2 0.3 179 chr3L 9846366 intron RasGAP1 - chr3L 9846456 intron RasGAP1 - chr3L 9846545 intron RasGAP1 - chr3L_5_9845001 chr3L_9845001 CanS-SH 1461 chr3L 3155571 3155574 chr3L 9873117 9873120 5 6717546 38.0 10.5 24.2 0.2 6717549 chr3L 3155571 intron BtbVII + chr3L 6514346 intron sfl + chr3L 9873120 intergenic not near genes chr3L_5_6510001 chr3L_6510001 CanS-SH 1462 chr3L 9892066 9892090 chr3L 9893403 9893427 6 1337 32.0 50.5 41.2 0.1 1361 chr3L 9892066 exon CalpB + chr3L 9892746 3` UTR CalpB + chr3L 9893427 3` UTR,exon CG14164 -,CG6709 - chr3L_6_9890001 chr3L_9890001 CanS-SH 1463 chr3L 9918818 9918901 chr3L 9918988 9919071 19 170 7.0 10.5 8.8 1.9 253 chr3L 9918818 intron CG34356 + chr3L 9918944 intron CG34356 + chr3L 9919071 intron CG34356 + chr3L_19_9915001 chr3L_9915001 CanS-SH 1464 chr3L 9929597 9929638 chr3L 9938454 9938495 roo 16 8857 20.0 7.5 13.8 1.1 8898 chr3L 9929597 intron CG34356 + chr3L 9934046 intron CG34356 + chr3L 9938495 intron CG34356 + chr3L_16_9930001 chr3L_9930001 CanS-SH 1465 chr3L 9945613 9945628 chr3L 9945770 9945785 5 157 12.0 3.5 7.8 0.6 172 chr3L 9945613 intron CG34356 + chr3L 9945699 intron CG34356 + chr3L 9945785 intron CG34356 + chr3L_5_9945001 chr3L_9945001 CanS-SH 1466 chr3L 9992605 9992690 chr3L 9992972 9993057 15 367 6.0 7.0 6.5 2.0 452 chr3L 9992605 intron dpr6 + chr3L 9992831 intron dpr6 + chr3L 9993057 intron dpr6 + chr3L_15_9990001 chr3L_9990001 CanS-SH 1467 chr3L 10003084 10003146 chr3L 10003256 10003318 30 172 5.0 4.5 4.8 5.2 234 chr3L 10003084 intron dpr6 + chr3L 10003201 intron dpr6 + chr3L 10003318 intron dpr6 + chr3L_30_10000001 chr3L_10000001 CanS-SH 1468 chr3L 10007117 10007198 chr3L 10007294 10007376 17 177 3.5 7.0 5.2 2.7 259 chr3L 10007117 intron dpr6 + chr3L 10007246 intron dpr6 + chr3L 10007376 intron dpr6 + chr3L_17_10005001 chr3L_10005001 CanS-SH 1469 chr3L 10032642 10032670 chr3L 10032806 10032834 11 164 0.0 4.0 2.0 3.7 192 chr3L 10032642 intron dpr6 + chr3L 10032738 intron dpr6 + chr3L 10032834 intron dpr6 + chr3L_11_10030001 chr3L_10030001 CanS-SH 1470 chr3L 10035832 10035899 chr3L 10036000 10036067 23 168 14.5 12.5 13.5 1.6 235 chr3L 10035832 intron dpr6 + chr3L 10035950 intron dpr6 + chr3L 10036067 intron dpr6 + chr3L_23_10035001 chr3L_10035001 CanS-SH 1471 chr3L 10191220 10191276 chr3L 10191406 10191462 17 186 10.0 10.5 10.2 1.5 242 chr3L 10191220 exon ect - chr3L 10191341 intron ect - chr3L 10191462 intron ect - chr3L_17_10190001 chr3L_10190001 CanS-SH 1472 chr3L 10214730 10214829 chr3L 10214923 10215006 10 191 0.0 2.0 1.0 5.0 276 chr3L 10214730 intergenic not near genes chr3L 10214868 intergenic not near genes chr3L 10215006 intergenic not near genes chr3L_10_10210001 chr3L_10210001 CanS-SH 1473 chr3L 10222692 10222769 chr3L 10222847 10222924 29 155 2.0 14.5 8.2 3.2 232 chr3L 10222692 intron scramb1 - chr3L 10222808 intron scramb1 - chr3L 10222924 intron scramb1 - chr3L_29_10220001 chr3L_10220001 CanS-SH 1474 chr3L 10246028 10246068 chr3L 10246206 10246246 6 178 0.0 14.0 7.0 0.8 218 chr3L 10246028 intergenic not near genes chr3L 10246137 intergenic not near genes chr3L 10246246 intergenic not near genes chr3L_6_10245001 chr3L_10245001 CanS-SH 1475 chr3L 10247625 10247694 chr3L 10247779 10247865 5 168 6.0 0.0 3.0 1.2 240 chr3L 10247625 5` UTR CR44539 + chr3L 10247745 5` UTR CR44539 + chr3L 10247865 3` UTR CR44540 - chr3L_5_10245001 chr3L_10245001 CanS-SH 1476 chr3L 10298607 10298668 chr3L 10298764 10298830 15 159 0.0 7.5 3.8 3.1 223 chr3L 10298607 intergenic not near genes chr3L 10298718 intergenic not near genes chr3L 10298830 intergenic not near genes chr3L_15_10295001 chr3L_10295001 CanS-SH 1477 chr3L 10299981 10300049 chr3L 10300148 10300216 11 167 5.5 6.0 5.8 1.6 235 chr3L 10299981 intergenic not near genes chr3L 10300098 intergenic not near genes chr3L 10300216 intergenic not near genes chr3L_11_10300001 chr3L_10300001 CanS-SH 1478 chr3L 10328043 10328082 chr3L 10328230 10328269 16 187 7.5 12.5 10.0 1.5 226 chr3L 10328043 intergenic not near genes chr3L 10328156 intergenic not near genes chr3L 10328269 intergenic not near genes chr3L_16_10325001 chr3L_10325001 CanS-SH 1479 chr3L 10365575 10365667 chr3L 10366288 10366379 15 713 5.5 6.0 5.8 2.2 804 chr3L 10365575 5` UTR CR44327 + chr3L 10365977 5` UTR CR44327 + chr3L 10366379 5` UTR CR44327 + chr3L_15_10365001 chr3L_10365001 CanS-SH 1480 chr3L 10373575 10373578 chr3L 10373736 10373739 5 161 10.5 12.0 11.2 0.4 164 chr3L 10373575 intergenic not near genes chr3L 10373657 intergenic not near genes chr3L 10373739 intergenic not near genes chr3L_5_10370001 chr3L_10370001 CanS-SH 1481 chr3L 10406389 10406431 chr3L 10406893 10406935 16 504 1.5 0.0 0.8 8.9 546 chr3L 10406389 intergenic not near genes chr3L 10406662 intergenic not near genes chr3L 10406935 intergenic not near genes chr3L_16_10405001 chr3L_10405001 CanS-SH 1482 chr3L 10414870 10414900 chr3L 10417315 10417345 Doc 7 2445 10.5 7.0 8.8 0.7 2475 chr3L 10414870 intergenic CG12362 + chr3L 10416108 intergenic not near genes chr3L 10417345 intergenic not near genes chr3L_7_10415001 chr3L_10415001 CanS-SH 1483 chr3L 10420411 10420502 chr3L 10420618 10420708 12 206 5.5 0.0 2.8 3.2 297 chr3L 10420411 intergenic not near genes chr3L 10420560 intergenic not near genes chr3L 10420708 intergenic not near genes chr3L_12_10420001 chr3L_10420001 CanS-SH 1484 chr3L 10468495 10468528 chr3L 10468919 10468952 8 424 16.0 6.0 11.0 0.7 457 chr3L 10468495 intergenic S-Lap3 + chr3L 10468724 intergenic S-Lap3 + chr3L 10468952 intergenic S-Lap3 + chr3L_8_10465001 chr3L_10465001 CanS-SH 1485 chr3L 10503344 10503379 chr3L 10503539 10503574 19 195 12.5 10.0 11.2 1.6 230 chr3L 10503344 intron A2bp1 + chr3L 10503459 intron A2bp1 + chr3L 10503574 intron A2bp1 + chr3L_19_10500001 chr3L_10500001 CanS-SH 1486 chr3L 10537179 10537219 chr3L 10537330 10537370 6 151 0.0 11.0 5.5 0.9 191 chr3L 10537179 intron A2bp1 + chr3L 10537274 intron A2bp1 + chr3L 10537370 intron A2bp1 + chr3L_6_10535001 chr3L_10535001 CanS-SH 1487 chr3L 10571208 10571232 chr3L 10571364 10571388 8 156 11.5 16.0 13.8 0.5 180 chr3L 10571208 exon A2bp1 + chr3L 10571298 intron A2bp1 + chr3L 10571388 intron A2bp1 + chr3L_8_10570001 chr3L_10570001 CanS-SH 1488 chr3L 10600381 10600449 chr3L 10600538 10600606 14 157 9.5 3.5 6.5 1.9 225 chr3L 10600381 intergenic not near genes chr3L 10600494 intergenic not near genes chr3L 10600606 intergenic not near genes chr3L_14_10600001 chr3L_10600001 CanS-SH 1489 chr3L 10614740 10614785 chr3L 10614902 10614939 8 160 0.0 13.0 6.5 1.1 199 chr3L 10614740 intergenic not near genes chr3L 10614840 intergenic not near genes chr3L 10614939 intergenic not near genes chr3L_8_10610001 chr3L_10610001 CanS-SH 1490 chr3L 10621780 10621876 chr3L 10621942 10622038 15 162 0.0 8.0 4.0 3.0 258 chr3L 10621780 intergenic not near genes chr3L 10621909 intergenic not near genes chr3L 10622038 intergenic not near genes chr3L_15_10620001 chr3L_10620001 CanS-SH 1491 chr3L 10654055 10654148 chr3L 10654217 10654311 22 162 10.0 8.5 9.2 2.2 256 chr3L 10654055 intron CG32066 - chr3L 10654183 intron CG32066 - chr3L 10654311 intron CG32066 - chr3L_22_10650001 chr3L_10650001 CanS-SH 1492 chr3L 10658004 10658203 chr3L 10658156 10658405 19 194 0.0 0.0 0.0 19.0 401 chr3L 10658004 intron CG32066 - chr3L 10658204 intron CG32066 - chr3L 10658405 intron CG32066 - chr3L_19_10655001 chr3L_10655001 CanS-SH 1493 chr3L 10694904 10694912 chr3L 10695079 10695087 5 175 0.0 20.5 10.2 0.4 183 chr3L 10694904 intron NijA - chr3L 10694996 intron NijA - chr3L 10695087 exon NijA - chr3L_5_10690001 chr3L_10690001 CanS-SH 1494 chr3L 10735764 10735784 chr3L 10735926 10735946 5 162 8.5 0.0 4.2 1.0 182 chr3L 10735764 intergenic not near genes chr3L 10735855 intergenic not near genes chr3L 10735946 intergenic not near genes chr3L_5_10735001 chr3L_10735001 CanS-SH 1495 chr3L 10739740 10739752 chr3L 10739899 10739911 7 159 10.5 0.0 5.2 1.1 171 chr3L 10739740 intergenic not near genes chr3L 10739826 intergenic not near genes chr3L 10739911 intergenic not near genes chr3L_7_10735001 chr3L_10735001 CanS-SH 1496 chr3L 10745075 10745116 chr3L 10745276 10745317 6 201 10.5 10.0 10.2 0.5 242 chr3L 10745075 intergenic not near genes chr3L 10745196 intergenic not near genes chr3L 10745317 intergenic not near genes chr3L_6_10745001 chr3L_10745001 CanS-SH 1497 chr3L 10762789 10762844 chr3L 10762948 10763003 17 159 10.5 9.5 10.0 1.5 214 chr3L 10762789 intergenic not near genes chr3L 10762896 intergenic not near genes chr3L 10763003 intergenic not near genes chr3L_17_10760001 chr3L_10760001 CanS-SH 1498 chr3L 10778739 10778823 chr3L 10778890 10778974 6 151 1.5 2.5 2.0 2.0 235 chr3L 10778739 intergenic not near genes chr3L 10778856 intergenic not near genes chr3L 10778974 intergenic not near genes chr3L_6_10775001 chr3L_10775001 CanS-SH 1499 chr3L 10820355 10820524 chr3L 10820521 10820748 7 230 0.0 0.0 0.0 7.0 393 chr3L 10820355 intergenic not near genes chr3L 10820552 intergenic not near genes chr3L 10820748 intergenic not near genes chr3L_7_10820001 chr3L_10820001 CanS-SH 1500 chr3L 10842361 10842367 chr3L 10842516 10842522 4 155 14.0 0.0 7.0 0.5 161 chr3L 10842361 intergenic not near genes chr3L 10842442 intergenic not near genes chr3L 10842522 intergenic not near genes chr3L_4_10840001 chr3L_10840001 CanS-SH 1501 chr3L 10941986 10942062 chr3L 10942144 10942220 24 158 11.5 13.5 12.5 1.8 234 chr3L 10941986 intergenic not near genes chr3L 10942103 intergenic not near genes chr3L 10942220 intergenic not near genes chr3L_24_10940001 chr3L_10940001 CanS-SH 1502 chr3L 10956375 10956463 chr3L 10956568 10956656 16 193 9.5 7.5 8.5 1.7 281 chr3L 10956375 intergenic not near genes chr3L 10956516 intergenic not near genes chr3L 10956656 intergenic not near genes chr3L_16_10955001 chr3L_10955001 CanS-SH 1503 chr3L 11018493 11018534 chr3L 11018651 11018692 10 158 7.0 5.0 6.0 1.4 199 chr3L 11018493 intergenic not near genes chr3L 11018592 intergenic not near genes chr3L 11018692 intergenic not near genes chr3L_10_11015001 chr3L_11015001 CanS-SH 1504 chr3L 11052277 11052344 chr3L 11052430 11052497 15 153 1.0 9.5 5.2 2.4 220 chr3L 11052277 intergenic not near genes chr3L 11052387 intergenic not near genes chr3L 11052497 intergenic not near genes chr3L_15_11050001 chr3L_11050001 CanS-SH 1505 chr3L 11053605 11053646 chr3L 11053770 11053811 11 165 8.5 0.0 4.2 2.1 206 chr3L 11053605 intergenic CG7888 + chr3L 11053708 intergenic CG7888 + chr3L 11053811 intergenic CG7888 + chr3L_11_11050001 chr3L_11050001 CanS-SH 1506 chr3L 11054164 11054203 chr3L 11054317 11054356 8 153 5.0 13.5 9.2 0.8 192 chr3L 11054164 5` UTR CG7888 + chr3L 11054260 5` UTR CG7888 + chr3L 11054356 5` UTR CG7888 + chr3L_8_11050001 chr3L_11050001 CanS-SH 1507 chr3L 11086988 11087023 chr3L 11088851 11088886 S-element 11 1863 18.0 6.5 12.2 0.8 1898 chr3L 11086988 intron JIL-1 - chr3L 11087937 intron JIL-1 - chr3L 11088886 intron JIL-1 - chr3L_11_11085001 chr3L_11085001 CanS-SH 1508 chr3L 11127864 11127913 chr3L 11128042 11128091 14 178 8.0 8.0 8.0 1.6 227 chr3L 11127864 intron CG42575 + chr3L 11127978 intron CG42575 + chr3L 11128091 intron CG42575 + chr3L_14_11125001 chr3L_11125001 CanS-SH 1509 chr3L 11135454 11135532 chr3L 11135759 11135869 22 314 4.0 0.0 2.0 7.3 415 chr3L 11135454 3` UTR CG14143 + chr3L 11135662 intergenic CG14143 +,CG32082 + chr3L 11135869 intergenic CG32082 +,CG14143 + chr3L_22_11135001 chr3L_11135001 CanS-SH 1510 chr3L 11135776 11135796 chr3L 11135936 11135956 6 160 0.0 13.5 6.8 0.8 180 chr3L 11135776 intergenic CG32082 +,CG14143 + chr3L 11135866 intergenic CG32082 +,CG14143 + chr3L 11135956 intergenic CG32082 +,CG14143 + chr3L_6_11135001 chr3L_11135001 CanS-SH 1511 chr3L 11180585 11180604 chr3L 11180768 11180787 9 183 13.5 11.5 12.5 0.7 202 chr3L 11180585 intron GlcAT-P - chr3L 11180686 intron GlcAT-P - chr3L 11180787 intron GlcAT-P - chr3L_9_11180001 chr3L_11180001 CanS-SH 1512 chr3L 11187671 11187728 chr3L 11187830 11187884 13 156 0.0 12.0 6.0 1.9 213 chr3L 11187671 intron GlcAT-P - chr3L 11187778 intron GlcAT-P - chr3L 11187884 intron GlcAT-P - chr3L_13_11185001 chr3L_11185001 CanS-SH 1513 chr3L 11200893 11200940 chr3L 11201044 11201091 16 151 0.0 5.0 2.5 4.6 198 chr3L 11200893 intron Plod - chr3L 11200992 intron Plod - chr3L 11201091 intron Plod - chr3L_16_11200001 chr3L_11200001 CanS-SH 1514 chr3L 11241702 11241748 chr3L 11241862 11241905 7 157 16.5 6.0 11.2 0.6 203 chr3L 11241702 intergenic not near genes chr3L 11241804 intergenic not near genes chr3L 11241905 intergenic not near genes chr3L_7_11240001 chr3L_11240001 CanS-SH 1515 chr3L 11264410 11264437 chr3L 11271437 11271464 17.6 7 7027 16.0 13.0 14.5 0.5 7054 chr3L 11264410 intergenic not near genes chr3L 11267937 intergenic not near genes chr3L 11271464 intergenic not near genes chr3L_7_11265001 chr3L_11265001 CanS-SH 1516 chr3L 11277395 11277412 chr3L 11278471 11278488 Rt1a 8 1076 1.5 12.0 6.8 1.0 1093 chr3L 11277395 intergenic not near genes chr3L 11277942 intergenic not near genes chr3L 11278488 intergenic not near genes chr3L_8_11275001 chr3L_11275001 CanS-SH 1517 chr3L 11285138 11285232 chr3L 11285364 11285459 12 227 6.5 0.0 3.2 2.9 321 chr3L 11285138 5` UTR CR45404 + chr3L 11285298 intergenic CR45404 + chr3L 11285459 intergenic CR45404 + chr3L_12_11285001 chr3L_11285001 CanS-SH 1518 chr3L 11302973 11303053 chr3L 11303134 11303214 9 161 4.5 0.0 2.2 2.8 241 chr3L 11302973 intergenic not near genes chr3L 11303094 intergenic not near genes chr3L 11303214 intergenic not near genes chr3L_9_11300001 chr3L_11300001 CanS-SH 1519 chr3L 11329633 11329669 chr3L 11332913 11332949 jockey 15 3280 4.5 14.5 9.5 1.4 3316 chr3L 11329633 intergenic not near genes chr3L 11331291 intergenic not near genes chr3L 11332949 intergenic not near genes chr3L_15_11330001 chr3L_11330001 CanS-SH 1520 chr3L 11345627 11345658 chr3L 11345910 11345941 12 283 11.0 8.0 9.5 1.1 314 chr3L 11345627 intergenic not near genes chr3L 11345784 intergenic not near genes chr3L 11345941 intergenic not near genes chr3L_12_11345001 chr3L_11345001 CanS-SH 1521 chr3L 11383905 11383927 chr3L 11384059 11384081 9 154 16.0 0.0 8.0 1.0 176 chr3L 11383905 intron CR42755 - chr3L 11383993 3` UTR CR42755 - chr3L 11384081 3` UTR CR42755 - chr3L_9_11380001 chr3L_11380001 CanS-SH 1522 chr3L 11418314 11418347 chr3L 11418545 11418578 12 231 1.5 9.5 5.5 1.8 264 chr3L 11418314 intergenic not near genes chr3L 11418446 intergenic not near genes chr3L 11418578 intergenic not near genes chr3L_12_11415001 chr3L_11415001 CanS-SH 1523 chr3L 11419034 11419049 chr3L 11419198 11419213 8 164 8.0 5.5 6.8 1.0 179 chr3L 11419034 intergenic not near genes chr3L 11419124 intergenic not near genes chr3L 11419213 intergenic not near genes chr3L_8_11415001 chr3L_11415001 CanS-SH 1524 chr3L 11441320 11441381 chr3L 11441473 11441535 10 153 0.0 9.0 4.5 1.8 215 chr3L 11441320 intergenic not near genes chr3L 11441428 intergenic not near genes chr3L 11441535 intergenic not near genes chr3L_10_11440001 chr3L_11440001 CanS-SH 1525 chr3L 11456847 11456904 chr3L 11457021 11457078 17 174 5.5 3.5 4.5 3.1 231 chr3L 11456847 intergenic CG12289 - chr3L 11456962 intergenic CG12289 - chr3L 11457078 3` UTR CG12289 - chr3L_17_11455001 chr3L_11455001 CanS-SH 1526 chr3L 11476623 11476706 chr3L 11477210 11477293 8 587 7.5 6.5 7.0 1.0 670 chr3L 11476623 intergenic not near genes chr3L 11476958 intergenic not near genes chr3L 11477293 intergenic not near genes chr3L_8_11475001 chr3L_11475001 CanS-SH 1527 chr3L 11488826 11488874 chr3L 11489013 11489063 10 189 12.5 6.5 9.5 1.0 237 chr3L 11488826 intron chrb + chr3L 11488944 intron chrb + chr3L 11489063 intron chrb + chr3L_10_11485001 chr3L_11485001 CanS-SH 1528 chr3L 11564714 11564725 chr3L 11572413 11572425 412 6 7700 17.5 3.0 10.2 0.5 7711 chr3L 11564714 5` UTR CG33267 + chr3L 11568570 intron CG33267 + chr3L 11572425 exon CG33267 + chr3L_6_11565001 chr3L_11565001 CanS-SH 1529 chr3L 11579491 11579579 chr3L 11579672 11579760 33 181 6.5 6.0 6.2 4.6 269 chr3L 11579491 intergenic CG43390 - chr3L 11579626 intergenic CG43390 - chr3L 11579760 3` UTR CG43390 - chr3L_33_11575001 chr3L_11575001 CanS-SH 1530 chr3L 11580613 11580661 chr3L 11580776 11580825 6 164 0.0 19.0 9.5 0.6 212 chr3L 11580613 intergenic CG43391 - chr3L 11580719 intergenic CG43391 - chr3L 11580825 intergenic CG43391 - chr3L_6_11580001 chr3L_11580001 CanS-SH 1531 chr3L 11663062 11663147 chr3L 11663314 11663390 10 251 7.0 0.0 3.5 2.2 328 chr3L 11663062 intron CG32085 - chr3L 11663226 intron CG32085 - chr3L 11663390 intron CG32085 - chr3L_10_11660001 chr3L_11660001 CanS-SH 1532 chr3L 11678032 11678114 chr3L 11678194 11678276 22 162 5.0 7.5 6.2 3.1 244 chr3L 11678032 intron CG32085 - chr3L 11678154 intron CG32085 - chr3L 11678276 intron CG32085 - chr3L_22_11675001 chr3L_11675001 CanS-SH 1533 chr3L 11708674 11708781 chr3L 11708868 11708937 11 191 0.0 7.0 3.5 2.4 263 chr3L 11708674 intergenic CG11658 -,Ccdc56 +,mtTFB1 + chr3L 11708806 intergenic Ccdc56 +,mtTFB1 +,CG11658 - chr3L 11708937 intergenic Ccdc56 +,mtTFB1 +,CG11658 - chr3L_11_11705001 chr3L_11705001 CanS-SH 1534 chr3L 11723026 11723058 chr3L 11727896 11727928 Doc 10 4870 17.0 13.5 15.2 0.6 4902 chr3L 11723026 3` UTR Bmcp + chr3L 11725477 intron Bmcp + chr3L 11727928 3` UTR Bmcp + chr3L_10_11725001 chr3L_11725001 CanS-SH 1535 chr3L 11743957 11744040 chr3L 11744140 11744223 9 183 7.5 4.0 5.8 1.3 266 chr3L 11743957 exon CG6024 - chr3L 11744090 intron CG6024 - chr3L 11744223 intron CG6024 - chr3L_9_11740001 chr3L_11740001 CanS-SH 1536 chr3L 11822253 11822277 chr3L 11822411 11822435 9 158 1.0 0.0 0.5 6.0 182 chr3L 11822253 5` UTR,5` UTR CG5946 -,CG11597 - chr3L 11822344 intergenic CG5946 -,CG11597 - chr3L 11822435 intergenic CG5946 -,CG11597 -,RpL10Ab + chr3L_9_11820001 chr3L_11820001 CanS-SH 1537 chr3L 11826508 11826543 chr3L 11826691 11826726 12 183 13.5 10.5 12.0 0.9 218 chr3L 11826508 intergenic CycA - chr3L 11826617 intergenic CycA - chr3L 11826726 3` UTR CycA - chr3L_12_11825001 chr3L_11825001 CanS-SH 1538 chr3L 11887189 11887233 chr3L 11887361 11887409 9 173 11.0 0.0 5.5 1.4 220 chr3L 11887189 intron CG44837 - chr3L 11887299 intron,3` UTR CG44837 -,CG5897 - chr3L 11887409 intron,3` UTR CG44837 -,CG5897 - chr3L_9_11885001 chr3L_11885001 CanS-SH 1539 chr3L 11943429 11943469 chr3L 11943605 11943645 17 176 13.5 6.0 9.8 1.6 216 chr3L 11943429 3` UTR Rpt4R + chr3L 11943537 intergenic Rpt4R +,CG5883 - chr3L 11943645 3` UTR CG5883 - chr3L_17_11940001 chr3L_11940001 CanS-SH 1540 chr3L 11961139 11961177 chr3L 11961318 11961356 14 179 16.0 10.0 13.0 1.0 217 chr3L 11961139 exon prc - chr3L 11961248 exon prc - chr3L 11961356 exon prc - chr3L_14_11960001 chr3L_11960001 CanS-SH 1541 chr3L 11998308 11998343 chr3L 11998467 11998502 9 159 0.0 16.0 8.0 1.0 194 chr3L 11998308 intergenic Pop2 -,Grip163 - chr3L 11998405 3` UTR Pop2 - chr3L 11998502 3` UTR Pop2 - chr3L_9_11995001 chr3L_11995001 CanS-SH 1542 chr3L 12013843 12013937 chr3L 12014009 12014103 23 166 7.0 4.5 5.8 3.4 260 chr3L 12013843 intron rols - chr3L 12013973 intron rols - chr3L 12014103 intron rols - chr3L_23_12010001 chr3L_12010001 CanS-SH 1543 chr3L 12089009 12089103 chr3L 12089164 12089258 33 155 8.0 5.5 6.8 4.2 249 chr3L 12089009 exon CG17154 + chr3L 12089134 3` UTR CG17154 + chr3L 12089258 intergenic CG17154 + chr3L_33_12085001 chr3L_12085001 CanS-SH 1544 chr3L 12108433 12108483 chr3L 12108594 12108644 6 161 9.0 0.0 4.5 1.1 211 chr3L 12108433 intergenic not near genes chr3L 12108538 intergenic not near genes chr3L 12108644 intergenic not near genes chr3L_6_12105001 chr3L_12105001 CanS-SH 1545 chr3L 12170724 12170793 chr3L 12170881 12170950 24 157 14.0 7.0 10.5 2.1 226 chr3L 12170724 intron Rh7 - chr3L 12170837 intron Rh7 - chr3L 12170950 intron Rh7 - chr3L_24_12170001 chr3L_12170001 CanS-SH 1546 chr3L 12186339 12186397 chr3L 12186530 12186588 16 191 5.0 8.5 6.8 2.1 249 chr3L 12186339 intron CG6910 + chr3L 12186464 intron CG6910 + chr3L 12186588 exon CG6910 + chr3L_16_12185001 chr3L_12185001 CanS-SH 1547 chr3L 12197320 12197414 chr3L 12197477 12197571 20 157 2.5 9.0 5.8 2.9 251 chr3L 12197320 intergenic CG11529 + chr3L 12197446 intergenic CG11529 + chr3L 12197571 intergenic CG11529 + chr3L_20_12195001 chr3L_12195001 CanS-SH 1548 chr3L 12249540 12249576 chr3L 12249723 12249759 5 183 13.0 5.5 9.2 0.5 219 chr3L 12249540 intron app - chr3L 12249650 intron app - chr3L 12249759 intron app - chr3L_5_12245001 chr3L_12245001 CanS-SH 1549 chr3L 12297431 12297452 chr3L 12297666 12297687 13 235 9.0 0.0 4.5 2.4 256 chr3L 12297431 intergenic not near genes chr3L 12297559 intergenic not near genes chr3L 12297687 intergenic not near genes chr3L_13_12295001 chr3L_12295001 CanS-SH 1550 chr3L 12300783 12300819 chr3L 12300997 12301033 15 214 7.5 9.0 8.2 1.6 250 chr3L 12300783 intergenic CR44550 + chr3L 12300908 intergenic CR44550 + chr3L 12301033 5` UTR CR44550 + chr3L_15_12300001 chr3L_12300001 CanS-SH 1551 chr3L 12353859 12353925 chr3L 12354023 12354089 24 164 8.0 8.5 8.2 2.6 230 chr3L 12353859 intergenic not near genes chr3L 12353974 intergenic not near genes chr3L 12354089 intergenic not near genes chr3L_24_12350001 chr3L_12350001 CanS-SH 1552 chr3L 12371024 12371035 chr3L 12371198 12371209 6 174 22.0 0.0 11.0 0.5 185 chr3L 12371024 intron Ncc69 - chr3L 12371116 intron Ncc69 - chr3L 12371209 intron Ncc69 - chr3L_6_12370001 chr3L_12370001 CanS-SH 1553 chr3L 12381468 12381551 chr3L 12381621 12381704 15 153 6.5 8.0 7.2 1.8 236 chr3L 12381468 intron Ncc69 - chr3L 12381586 intron Ncc69 - chr3L 12381704 intron Ncc69 - chr3L_15_12380001 chr3L_12380001 CanS-SH 1554 chr3L 12446195 12446289 chr3L 12446348 12446441 18 153 8.0 5.0 6.5 2.4 246 chr3L 12446195 intergenic not near genes chr3L 12446318 intergenic not near genes chr3L 12446441 intergenic not near genes chr3L_18_12445001 chr3L_12445001 CanS-SH 1555 chr3L 12453548 12453608 chr3L 12453724 12453784 4 176 5.0 5.0 5.0 0.7 236 chr3L 12453548 intergenic not near genes chr3L 12453666 intergenic not near genes chr3L 12453784 intergenic not near genes chr3L_4_12450001 chr3L_12450001 CanS-SH 1556 chr3L 12458409 12458503 chr3L 12458581 12458677 6 173 6.5 7.0 6.8 0.8 268 chr3L 12458409 intergenic not near genes chr3L 12458543 intergenic not near genes chr3L 12458677 intergenic not near genes chr3L_6_12455001 chr3L_12455001 CanS-SH 1557 chr3L 12467178 12467272 chr3L 12467338 12467432 20 160 1.5 6.0 3.8 4.2 254 chr3L 12467178 intron eyg - chr3L 12467305 intron eyg - chr3L 12467432 intron eyg - chr3L_20_12465001 chr3L_12465001 CanS-SH 1558 chr3L 12485404 12485407 chr3L 12485560 12485563 4 156 2.5 26.0 14.2 0.3 159 chr3L 12485404 intron CG33725 + chr3L 12485484 intron CG33725 + chr3L 12485563 intron CG33725 + chr3L_4_12485001 chr3L_12485001 CanS-SH 1559 chr3L 12577984 12578017 chr3L 12578146 12578180 8 163 11.5 0.0 5.8 1.2 196 chr3L 12577984 intergenic not near genes chr3L 12578082 intergenic not near genes chr3L 12578180 intergenic not near genes chr3L_8_12575001 chr3L_12575001 CanS-SH 1560 chr3L 12610957 12610969 chr3L 12611278 12611290 4 321 0.0 13.5 6.8 0.5 333 chr3L 12610957 intron caup + chr3L 12611124 intron caup + chr3L 12611290 intron caup + chr3L_4_12610001 chr3L_12610001 CanS-SH 1561 chr3L 12614555 12614593 chr3L 12614768 12614806 5 213 0.0 10.5 5.2 0.8 251 chr3L 12614555 intron caup + chr3L 12614680 intron caup + chr3L 12614806 intron caup + chr3L_5_12610001 chr3L_12610001 CanS-SH 1562 chr3L 12626096 12626143 chr3L 12626280 12626327 12 184 15.5 3.0 9.2 1.2 231 chr3L 12626096 intergenic not near genes chr3L 12626212 intergenic not near genes chr3L 12626327 intergenic not near genes chr3L_12_12625001 chr3L_12625001 CanS-SH 1563 chr3L 12647936 12647966 chr3L 12648087 12648117 5 151 6.5 0.0 3.2 1.2 181 chr3L 12647936 5` UTR CR32111 + chr3L 12648026 5` UTR CR32111 + chr3L 12648117 5` UTR CR32111 + chr3L_5_12645001 chr3L_12645001 CanS-SH 1564 chr3L 12668004 12668082 chr3L 12668164 12668242 22 160 7.0 5.5 6.2 3.1 238 chr3L 12668004 intergenic not near genes chr3L 12668123 intergenic not near genes chr3L 12668242 intergenic not near genes chr3L_22_12665001 chr3L_12665001 CanS-SH 1565 chr3L 12706576 12706648 chr3L 12706777 12706850 13 202 11.0 6.5 8.8 1.3 274 chr3L 12706576 intron mirr + chr3L 12706713 intron mirr + chr3L 12706850 intron mirr + chr3L_13_12705001 chr3L_12705001 CanS-SH 1566 chr3L 12722228 12722273 chr3L 12722385 12722430 12 157 11.0 8.0 9.5 1.1 202 chr3L 12722228 intergenic not near genes chr3L 12722329 intergenic not near genes chr3L 12722430 intergenic not near genes chr3L_12_12720001 chr3L_12720001 CanS-SH 1567 chr3L 12727960 12728034 chr3L 12728119 12728193 35 159 8.0 10.0 9.0 3.5 233 chr3L 12727960 intergenic not near genes chr3L 12728076 intergenic not near genes chr3L 12728193 intergenic not near genes chr3L_35_12725001 chr3L_12725001 CanS-SH 1568 chr3L 12799785 12799822 chr3L 12799967 12800005 12 183 13.0 18.5 15.8 0.7 220 chr3L 12799785 intron Atg1 - chr3L 12799895 intron Atg1 - chr3L 12800005 intron Atg1 - chr3L_12_12795001 chr3L_12795001 CanS-SH 1569 chr3L 12857929 12857964 chr3L 12858099 12858134 16 170 14.5 7.0 10.8 1.4 205 chr3L 12857929 3` UTR CG32107 - chr3L 12858032 3` UTR CG32107 - chr3L 12858134 3` UTR CG32107 - chr3L_16_12855001 chr3L_12855001 CanS-SH 1570 chr3L 12874858 12874906 chr3L 12877225 12877273 jockey 17 2367 11.5 8.0 9.8 1.6 2415 chr3L 12874858 intergenic not near genes chr3L 12876066 intergenic not near genes chr3L 12877273 intergenic not near genes chr3L_17_12875001 chr3L_12875001 CanS-SH 1571 chr3L 12879146 12879231 chr3L 12879304 12879389 19 158 5.0 7.5 6.2 2.6 243 chr3L 12879146 intergenic not near genes chr3L 12879268 intergenic not near genes chr3L 12879389 intergenic not near genes chr3L_19_12875001 chr3L_12875001 CanS-SH 1572 chr3L 12929657 12929668 chr3L 12930048 12930059 INE-1 6 391 0.0 3.5 1.8 2.1 402 chr3L 12929657 intergenic not near genes chr3L 12929858 intergenic not near genes chr3L 12930059 intergenic not near genes chr3L_6_12925001 chr3L_12925001 CanS-SH 1573 chr3L 12957728 12957764 chr3L 12962285 12962321 copia 9 4557 9.5 10.5 10.0 0.8 4593 chr3L 12957728 intergenic not near genes chr3L 12960024 intergenic not near genes chr3L 12962321 intergenic not near genes chr3L_9_12960001 chr3L_12960001 CanS-SH 1574 chr3L 12962666 12962705 chr3L 12963048 12963087 9 382 15.0 7.5 11.2 0.7 421 chr3L 12962666 intergenic not near genes chr3L 12962876 intergenic not near genes chr3L 12963087 intergenic not near genes chr3L_9_12960001 chr3L_12960001 CanS-SH 1575 chr3L 12978697 12978792 chr3L 12978851 12978946 13 154 4.5 0.5 2.5 3.7 249 chr3L 12978697 intergenic not near genes chr3L 12978822 intergenic not near genes chr3L 12978946 intergenic not near genes chr3L_13_12975001 chr3L_12975001 CanS-SH 1576 chr3L 13017857 13017909 chr3L 13018014 13018066 20 157 10.0 13.5 11.8 1.6 209 chr3L 13017857 5` UTR mRpL20 - chr3L 13017962 intergenic mRpL20 -,ste14 +,CR45445 - chr3L 13018066 intergenic mRpL20 -,ste14 +,CR45445 - chr3L_20_13015001 chr3L_13015001 CanS-SH 1577 chr3L 13067468 13067570 chr3L 13067619 13067721 17 151 3.0 1.5 2.2 5.3 253 chr3L 13067468 intergenic not near genes chr3L 13067594 intergenic not near genes chr3L 13067721 intergenic not near genes chr3L_17_13065001 chr3L_13065001 CanS-SH 1578 chr3L 13130586 13130614 chr3L 13130746 13130774 8 160 18.5 8.0 13.2 0.6 188 chr3L 13130586 intergenic not near genes chr3L 13130680 intergenic not near genes chr3L 13130774 intergenic not near genes chr3L_8_13130001 chr3L_13130001 CanS-SH 1579 chr3L 13150817 13150878 chr3L 13150980 13151056 14 175 0.0 3.0 1.5 5.6 239 chr3L 13150817 intergenic not near genes chr3L 13150936 intergenic not near genes chr3L 13151056 intergenic not near genes chr3L_14_13150001 chr3L_13150001 CanS-SH 1580 chr3L 13159215 13159296 chr3L 13159369 13159450 13 154 6.0 2.0 4.0 2.6 235 chr3L 13159215 intergenic not near genes chr3L 13159332 intergenic not near genes chr3L 13159450 intergenic not near genes chr3L_13_13155001 chr3L_13155001 CanS-SH 1581 chr3L 13159742 13159783 chr3L 13160050 13160091 10 308 13.0 6.0 9.5 1.0 349 chr3L 13159742 intergenic not near genes chr3L 13159916 intergenic not near genes chr3L 13160091 intergenic not near genes chr3L_10_13155001 chr3L_13155001 CanS-SH 1582 chr3L 13194075 13194089 chr3L 13194229 13194243 9 154 9.5 18.0 13.8 0.6 168 chr3L 13194075 intergenic not near genes chr3L 13194159 intergenic not near genes chr3L 13194243 intergenic not near genes chr3L_9_13190001 chr3L_13190001 CanS-SH 1583 chr3L 13261745 13261837 chr3L 13261910 13262002 25 165 4.5 7.5 6.0 3.6 257 chr3L 13261745 intron caps + chr3L 13261874 intron caps + chr3L 13262002 intron caps + chr3L_25_13260001 chr3L_13260001 CanS-SH 1584 chr3L 13267243 13267316 chr3L 13267431 13267517 13 194 3.0 0.0 1.5 5.2 274 chr3L 13267243 intron caps + chr3L 13267380 intron caps + chr3L 13267517 intron caps + chr3L_13_13265001 chr3L_13265001 CanS-SH 1585 chr3L 13295856 13295899 chr3L 13296013 13296056 12 157 0.0 15.0 7.5 1.4 200 chr3L 13295856 intergenic not near genes chr3L 13295956 intergenic not near genes chr3L 13296056 intergenic Sfp70A4 - chr3L_12_13295001 chr3L_13295001 CanS-SH 1586 chr3L 13301190 13301278 chr3L 13301359 13301435 11 158 0.0 13.5 6.8 1.4 245 chr3L 13301190 intergenic SP + chr3L 13301312 intergenic SP + chr3L 13301435 intergenic SP + chr3L_11_13300001 chr3L_13300001 CanS-SH 1587 chr3L 13315848 13315946 chr3L 13316187 13316285 9 339 0.0 4.5 2.2 2.8 437 chr3L 13315848 intergenic not near genes chr3L 13316066 intergenic not near genes chr3L 13316285 intergenic not near genes chr3L_9_13315001 chr3L_13315001 CanS-SH 1588 chr3L 13337099 13337114 chr3L 13337265 13337280 5 166 12.0 10.0 11.0 0.4 181 chr3L 13337099 intergenic not near genes chr3L 13337190 intergenic not near genes chr3L 13337280 intergenic not near genes chr3L_5_13335001 chr3L_13335001 CanS-SH 1589 chr3L 13432227 13432285 chr3L 13432401 13432459 18 174 8.0 9.5 8.8 1.8 232 chr3L 13432227 intron CG10713 - chr3L 13432343 intron CG10713 - chr3L 13432459 intron CG10713 - chr3L_18_13430001 chr3L_13430001 CanS-SH 1590 chr3L 13477007 13477036 chr3L 13477159 13477188 12 152 3.0 14.5 8.8 1.2 181 chr3L 13477007 intergenic not near genes chr3L 13477098 intergenic stv + chr3L 13477188 intergenic stv + chr3L_12_13475001 chr3L_13475001 CanS-SH 1591 chr3L 13525092 13525118 chr3L 13532963 13532989 roo 15 7871 16.5 8.0 12.2 1.1 7897 chr3L 13525092 intergenic not near genes chr3L 13529040 intergenic not near genes chr3L 13532989 intergenic not near genes chr3L_15_13525001 chr3L_13525001 CanS-SH 1592 chr3L 13560458 13560533 chr3L 13560616 13560692 8 158 7.0 0.0 3.5 1.8 234 chr3L 13560458 intron bru-3 - chr3L 13560575 intron bru-3 - chr3L 13560692 intron bru-3 - chr3L_8_13560001 chr3L_13560001 CanS-SH 1593 chr3L 13574572 13574589 chr3L 13580157 13580174 Rt1c 5 5585 11.0 9.5 10.2 0.4 5602 chr3L 13574572 intron bru-3 - chr3L 13577373 intron bru-3 - chr3L 13580174 intron bru-3 - chr3L_5_13575001 chr3L_13575001 CanS-SH 1594 chr3L 13629459 13629496 chr3L 13629643 13629680 7 184 14.5 12.0 13.2 0.5 221 chr3L 13629459 intron bru-3 - chr3L 13629570 intron bru-3 - chr3L 13629680 intron bru-3 - chr3L_7_13625001 chr3L_13625001 CanS-SH 1595 chr3L 13677464 13677510 chr3L 13677616 13677662 9 152 9.5 5.0 7.2 1.1 198 chr3L 13677464 intron bru-3 - chr3L 13677563 intron bru-3 - chr3L 13677662 intron bru-3 - chr3L_9_13675001 chr3L_13675001 CanS-SH 1596 chr3L 13739968 13740046 chr3L 13740135 13740212 11 167 7.5 4.5 6.0 1.6 244 chr3L 13739968 intron bru-3 - chr3L 13740090 intron bru-3 - chr3L 13740212 intron bru-3 - chr3L_11_13740001 chr3L_13740001 CanS-SH 1597 chr3L 13768970 13769024 chr3L 13769134 13769188 7 164 0.0 13.5 6.8 0.9 218 chr3L 13768970 intron bru-3 - chr3L 13769079 intron bru-3 - chr3L 13769188 intron bru-3 - chr3L_7_13765001 chr3L_13765001 CanS-SH 1598 chr3L 13796286 13796327 chr3L 13796632 13796673 13 346 11.0 4.0 7.5 1.5 387 chr3L 13796286 intron bru-3 - chr3L 13796480 intron bru-3 - chr3L 13796673 intron bru-3 - chr3L_13_13795001 chr3L_13795001 CanS-SH 1599 chr3L 13804482 13804517 chr3L 13822843 13822878 roo 12 18361 15.5 10.0 12.8 0.9 18396 chr3L 13804482 intergenic not near genes chr3L 13813680 intergenic not near genes chr3L 13822878 intergenic not near genes chr3L_12_13810001 chr3L_13810001 CanS-SH 1600 chr3L 13878421 13878427 chr3L 13878577 13878583 4 156 7.5 1.0 4.2 0.8 162 chr3L 13878421 intron dysc - chr3L 13878502 intron dysc - chr3L 13878583 intron dysc - chr3L_4_13875001 chr3L_13875001 CanS-SH 1601 chr3L 13884308 13884367 chr3L 13884474 13884533 23 166 9.0 12.5 10.8 1.9 225 chr3L 13884308 intron dysc - chr3L 13884420 intron dysc - chr3L 13884533 intron dysc - chr3L_23_13880001 chr3L_13880001 CanS-SH 1602 chr3L 13891047 13891066 chr3L 13891218 13891237 6 171 1.5 0.0 0.8 3.3 190 chr3L 13891047 intron dysc - chr3L 13891142 intron dysc - chr3L 13891237 intron dysc - chr3L_6_13890001 chr3L_13890001 CanS-SH 1603 chr3L 13928993 13929010 chr3L 13929144 13929161 6 151 11.5 7.0 9.2 0.6 168 chr3L 13928993 5` UTR CG8833 - chr3L 13929077 intergenic CG8833 -,Gl + chr3L 13929161 intergenic CG8833 -,Gl + chr3L_6_13925001 chr3L_13925001 CanS-SH 1604 chr3L 13931268 13931370 chr3L 13931448 13931550 4 180 5.0 7.5 6.2 0.6 282 chr3L 13931268 intron Gl + chr3L 13931409 intron Gl + chr3L 13931550 intron Gl + chr3L_4_13930001 chr3L_13930001 CanS-SH 1605 chr3L 13936380 13936612 chr3L 13936554 13936822 9 177 0.5 0.5 0.5 6.0 442 chr3L 13936380 intergenic not near genes chr3L 13936601 intergenic not near genes chr3L 13936822 intergenic not near genes chr3L_9_13935001 chr3L_13935001 CanS-SH 1606 chr3L 13938736 13938910 chr3L 13938907 13939081 24 194 0.0 0.0 0.0 24.0 345 chr3L 13938736 intergenic not near genes chr3L 13938908 intergenic CG32137 + chr3L 13939081 intergenic CG32137 + chr3L_24_13935001 chr3L_13935001 CanS-SH 1607 chr3L 13993935 13994010 chr3L 13994090 13994166 9 155 0.0 4.0 2.0 3.0 231 chr3L 13993935 intergenic 26-29-p + chr3L 13994050 intergenic 26-29-p + chr3L 13994166 intergenic 26-29-p + chr3L_9_13990001 chr3L_13990001 CanS-SH 1608 chr3L 14076006 14076093 chr3L 14076160 14076247 29 154 12.0 0.0 6.0 4.1 241 chr3L 14076006 3` UTR,5` UTR Pex1 +,btl + chr3L 14076126 intron btl + chr3L 14076247 intron btl + chr3L_29_14075001 chr3L_14075001 CanS-SH 1609 chr3L 14089425 14089474 chr3L 14089597 14089646 12 172 10.5 0.5 5.5 1.8 221 chr3L 14089425 intergenic not near genes chr3L 14089536 intergenic not near genes chr3L 14089646 intergenic not near genes chr3L_12_14085001 chr3L_14085001 CanS-SH 1610 chr3L 14141398 14141413 chr3L 14141554 14141569 4 156 5.5 4.0 4.8 0.7 171 chr3L 14141398 intergenic not near genes chr3L 14141484 intergenic not near genes chr3L 14141569 intergenic not near genes chr3L_4_14140001 chr3L_14140001 CanS-SH 1611 chr3L 14180678 14180710 chr3L 14180829 14180861 12 151 16.5 5.0 10.8 1.0 183 chr3L 14180678 intergenic not near genes chr3L 14180770 intergenic not near genes chr3L 14180861 intergenic not near genes chr3L_12_14180001 chr3L_14180001 CanS-SH 1612 chr3L 14228061 14228098 chr3L 14228215 14228253 14 155 12.5 1.5 7.0 1.8 192 chr3L 14228061 intron nuf + chr3L 14228157 intron nuf + chr3L 14228253 intron nuf + chr3L_14_14225001 chr3L_14225001 CanS-SH 1613 chr3L 14235985 14236011 chr3L 14236197 14236223 6 212 19.5 9.5 14.5 0.4 238 chr3L 14235985 intergenic CG34244 - chr3L 14236104 intergenic CG34244 - chr3L 14236223 intergenic CG34244 -,CG7906 + chr3L_6_14235001 chr3L_14235001 CanS-SH 1614 chr3L 14236697 14236776 chr3L 14236859 14236932 5 158 7.5 0.0 3.8 1.0 235 chr3L 14236697 5` UTR CG7906 + chr3L 14236814 intron CG7906 + chr3L 14236932 intron CG7906 + chr3L_5_14235001 chr3L_14235001 CanS-SH 1615 chr3L 14239919 14240006 chr3L 14240091 14240178 28 172 5.5 5.0 5.2 4.5 259 chr3L 14239919 intergenic CR45399 - chr3L 14240048 intergenic not near genes chr3L 14240178 intergenic not near genes chr3L_28_14240001 chr3L_14240001 CanS-SH 1616 chr3L 14245512 14245574 chr3L 14245681 14245743 1360 18 169 8.5 10.0 9.2 1.8 231 chr3L 14245512 3` UTR CR44561 - chr3L 14245628 3` UTR CR44561 - chr3L 14245743 intergenic CR44561 -,CR44560 + chr3L_18_14245001 chr3L_14245001 CanS-SH 1617 chr3L 14267334 14267374 chr3L 14271821 14271861 F-element 15 4487 8.0 0.0 4.0 3.0 4527 chr3L 14267334 intergenic not near genes chr3L 14269598 intergenic not near genes chr3L 14271861 intergenic not near genes chr3L_15_14265001 chr3L_14265001 CanS-SH 1618 chr3L 14282522 14282591 chr3L 14282677 14282746 25 155 7.0 12.5 9.8 2.3 224 chr3L 14282522 intron fz + chr3L 14282634 intron fz + chr3L 14282746 intron fz + chr3L_25_14280001 chr3L_14280001 CanS-SH 1619 chr3L 14295915 14295956 chr3L 14296476 14296517 roo 13 561 16.5 8.0 12.2 1.0 602 chr3L 14295915 intron fz + chr3L 14296216 intron fz + chr3L 14296517 intron fz + chr3L_13_14295001 chr3L_14295001 CanS-SH 1620 chr3L 14311970 14311990 chr3L 14316859 14316879 X-element 5 4889 9.0 10.0 9.5 0.5 4909 chr3L 14311970 exon fz + chr3L 14314424 intron fz + chr3L 14316879 intron fz + chr3L_5_14310001 chr3L_14310001 CanS-SH 1621 chr3L 14338219 14338300 chr3L 14338395 14338468 13 172 5.5 8.5 7.0 1.6 249 chr3L 14338219 intron fz + chr3L 14338344 intron fz + chr3L 14338468 intron fz + chr3L_13_14335001 chr3L_14335001 CanS-SH 1622 chr3L 14356452 14356540 chr3L 14356607 14356695 19 155 10.0 3.5 6.8 2.4 243 chr3L 14356452 intron fz + chr3L 14356574 intron fz + chr3L 14356695 intron fz + chr3L_19_14355001 chr3L_14355001 CanS-SH 1623 chr3L 14385015 14385108 chr3L 14385178 14385271 19 163 4.5 7.0 5.8 2.8 256 chr3L 14385015 intergenic not near genes chr3L 14385143 intergenic not near genes chr3L 14385271 intergenic not near genes chr3L_19_14385001 chr3L_14385001 CanS-SH 1624 chr3L 14399102 14399118 chr3L 14399266 14399282 7 164 12.5 0.0 6.2 1.0 180 chr3L 14399102 intergenic not near genes chr3L 14399192 intergenic not near genes chr3L 14399282 intergenic not near genes chr3L_7_14395001 chr3L_14395001 CanS-SH 1625 chr3L 14411803 14411877 chr3L 14411957 14412031 24 154 10.5 7.5 9.0 2.4 228 chr3L 14411803 exon CG3919 + chr3L 14411917 intron CG3919 + chr3L 14412031 intron CG3919 + chr3L_24_14410001 chr3L_14410001 CanS-SH 1626 chr3L 14439150 14439184 chr3L 14439388 14439422 17 238 14.0 6.0 10.0 1.5 272 chr3L 14439150 intron bbg - chr3L 14439286 intron bbg - chr3L 14439422 intron bbg - chr3L_17_14435001 chr3L_14435001 CanS-SH 1627 chr3L 14468391 14468416 chr3L 14473672 14473697 copia 5 5281 21.0 7.0 14.0 0.3 5306 chr3L 14468391 intron bbg - chr3L 14471044 intron bbg - chr3L 14473697 intron bbg - chr3L_5_14470001 chr3L_14470001 CanS-SH 1628 chr3L 14485949 14486049 chr3L 14486105 14486205 19 156 8.0 6.5 7.2 2.3 256 chr3L 14485949 intron bbg - chr3L 14486077 intron bbg - chr3L 14486205 intron bbg - chr3L_19_14485001 chr3L_14485001 CanS-SH 1629 chr3L 14524293 14524353 chr3L 14529133 14529193 F-element 16 4840 7.0 6.5 6.8 2.1 4900 chr3L 14524293 intron bbg - chr3L 14526743 intron bbg - chr3L 14529193 intron bbg - chr3L_16_14525001 chr3L_14525001 CanS-SH 1630 chr3L 14531237 14531241 chr3L 14531425 14531429 4 188 4.0 23.5 13.8 0.3 192 chr3L 14531237 intron bbg - chr3L 14531333 intron bbg - chr3L 14531429 intron bbg - chr3L_4_14530001 chr3L_14530001 CanS-SH 1631 chr3L 14541652 14541719 chr3L 14541817 14541884 18 165 8.5 7.5 8.0 2.0 232 chr3L 14541652 3` UTR CG9238 - chr3L 14541768 3` UTR CG9238 - chr3L 14541884 3` UTR CG9238 - chr3L_18_14540001 chr3L_14540001 CanS-SH 1632 chr3L 14546745 14546816 chr3L 14546921 14546992 15 176 0.0 4.5 2.2 4.7 247 chr3L 14546745 intron CG9238 - chr3L 14546868 intron CG9238 - chr3L 14546992 intron CG9238 - chr3L_15_14545001 chr3L_14545001 CanS-SH 1633 chr3L 14596037 14596072 chr3L 14596192 14596227 16 155 8.5 1.0 4.8 2.8 190 chr3L 14596037 exon HGTX - chr3L 14596132 intron HGTX - chr3L 14596227 intron HGTX - chr3L_16_14595001 chr3L_14595001 CanS-SH 1634 chr3L 14633724 14633793 chr3L 14633895 14633964 22 171 7.5 10.0 8.8 2.2 240 chr3L 14633724 intron dlp + chr3L 14633844 intron dlp + chr3L 14633964 intron dlp + chr3L_22_14630001 chr3L_14630001 CanS-SH 1635 chr3L 14721124 14721160 chr3L 14723042 14723078 Rt1c 12 1918 12.5 8.0 10.2 1.1 1954 chr3L 14721124 intron ome + chr3L 14722101 intron ome + chr3L 14723078 intron ome + chr3L_12_14720001 chr3L_14720001 CanS-SH 1636 chr3L 14725506 14725536 chr3L 14728594 14728624 Doc 6 3088 13.0 7.5 10.2 0.5 3118 chr3L 14725506 intron ome + chr3L 14727065 intron ome + chr3L 14728624 intron ome + chr3L_6_14725001 chr3L_14725001 CanS-SH 1637 chr3L 14792408 14792432 chr3L 14792575 14792599 10 167 10.0 0.0 5.0 1.7 191 chr3L 14792408 exon CG9425 + chr3L 14792504 intron CG9425 + chr3L 14792599 intron CG9425 + chr3L_10_14790001 chr3L_14790001 CanS-SH 1638 chr3L 14809347 14809386 chr3L 14809667 14809706 12 320 13.5 9.0 11.2 1.0 359 chr3L 14809347 intron CG17839 + chr3L 14809526 intron CG17839 + chr3L 14809706 intron CG17839 + chr3L_12_14805001 chr3L_14805001 CanS-SH 1639 chr3L 14813087 14813106 chr3L 14813239 14813258 8 152 7.5 7.5 7.5 0.9 171 chr3L 14813087 intron CG17839 + chr3L 14813172 intron CG17839 + chr3L 14813258 intron CG17839 + chr3L_8_14810001 chr3L_14810001 CanS-SH 1640 chr3L 14817462 14817537 chr3L 14817633 14817708 24 171 11.5 8.0 9.8 2.2 246 chr3L 14817462 intron CG17839 + chr3L 14817585 intron CG17839 + chr3L 14817708 intron CG17839 + chr3L_24_14815001 chr3L_14815001 CanS-SH 1641 chr3L 14825088 14825155 chr3L 14832890 14832957 Stalker2 6 7802 5.5 13.5 9.5 0.6 7869 chr3L 14825088 intron CG17839 + chr3L 14829022 intron CG17839 + chr3L 14832957 intron CG17839 + chr3L_6_14825001 chr3L_14825001 CanS-SH 1642 chr3L 14843232 14843291 chr3L 14843414 14843473 18 182 16.5 7.0 11.8 1.4 241 chr3L 14843232 intron CG17839 + chr3L 14843352 intron CG17839 + chr3L 14843473 intron CG17839 + chr3L_18_14840001 chr3L_14840001 CanS-SH 1643 chr3L 14844192 14844284 chr3L 14844358 14844454 26 168 7.0 5.5 6.2 3.6 262 chr3L 14844192 intron CG17839 + chr3L 14844323 intron CG17839 + chr3L 14844454 intron CG17839 + chr3L_26_14840001 chr3L_14840001 CanS-SH 1644 chr3L 14866755 14866836 chr3L 14866921 14867001 15 166 4.0 12.0 8.0 1.7 246 chr3L 14866755 exon CG17839 + chr3L 14866878 intron CG17839 + chr3L 14867001 intron CG17839 + chr3L_15_14865001 chr3L_14865001 CanS-SH 1645 chr3L 14906074 14906134 chr3L 14906234 14906294 15 160 6.5 5.0 5.8 2.2 220 chr3L 14906074 intron DCX-EMAP + chr3L 14906184 intron DCX-EMAP + chr3L 14906294 intron DCX-EMAP + chr3L_15_14905001 chr3L_14905001 CanS-SH 1646 chr3L 14914015 14914053 chr3L 14914236 14914274 12 221 17.0 8.0 12.5 0.9 259 chr3L 14914015 intron DCX-EMAP + chr3L 14914144 intron DCX-EMAP + chr3L 14914274 intron DCX-EMAP + chr3L_12_14910001 chr3L_14910001 CanS-SH 1647 chr3L 14933370 14933437 chr3L 14933527 14933594 18 157 7.0 8.5 7.8 2.0 224 chr3L 14933370 intron DCX-EMAP + chr3L 14933482 intron DCX-EMAP + chr3L 14933594 intron DCX-EMAP + chr3L_18_14930001 chr3L_14930001 CanS-SH 1648 chr3L 14961813 14961856 chr3L 14962238 14962281 12 425 16.0 11.0 13.5 0.8 468 chr3L 14961813 intergenic not near genes chr3L 14962047 intergenic not near genes chr3L 14962281 intergenic not near genes chr3L_12_14960001 chr3L_14960001 CanS-SH 1649 chr3L 15048161 15048207 chr3L 15048450 15048496 17 289 54.0 53.5 53.8 0.3 335 chr3L 15048161 intron Sytbeta - chr3L 15048328 intron Sytbeta - chr3L 15048496 intron Sytbeta - chr3L_17_15045001 chr3L_15045001 CanS-SH 1650 chr3L 15084706 15084739 chr3L 15084861 15084894 7 155 8.5 14.5 11.5 0.6 188 chr3L 15084706 intron cp309 - chr3L 15084800 intron cp309 - chr3L 15084894 intron cp309 - chr3L_7_15080001 chr3L_15080001 CanS-SH 1651 chr3L 15084985 15085023 chr3L 15086226 15086264 1360 8 1241 13.0 7.0 10.0 0.7 1279 chr3L 15084985 intron cp309 - chr3L 15085624 intron cp309 - chr3L 15086264 intron cp309 - chr3L_8_15085001 chr3L_15085001 CanS-SH 1652 chr3L 15094899 15094953 chr3L 15095070 15095124 17 171 11.5 13.5 12.5 1.3 225 chr3L 15094899 intergenic cp309 -,CG6945 -,Aats-gly + chr3L 15095012 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095124 intergenic Aats-gly +,cp309 -,CG6945 - chr3L_17_15095001 chr3L_15095001 CanS-SH 1653 chr3L 15146097 15146173 chr3L 15146249 15146337 14 153 0.0 8.5 4.2 2.7 240 chr3L 15146097 3` UTR Pex3 + chr3L 15146217 3` UTR Pex3 + chr3L 15146337 3` UTR Pex3 + chr3L_14_15145001 chr3L_15145001 CanS-SH 1654 chr3L 15151158 15151185 chr3L 15151417 15151444 8 259 16.5 7.5 12.0 0.6 286 chr3L 15151158 intron FucTA + chr3L 15151301 intron FucTA + chr3L 15151444 intron FucTA + chr3L_8_15150001 chr3L_15150001 CanS-SH 1655 chr3L 15164949 15164993 chr3L 15165122 15165166 11 173 11.0 6.0 8.5 1.2 217 chr3L 15164949 intergenic not near genes chr3L 15165058 intergenic not near genes chr3L 15165166 intergenic not near genes chr3L_11_15165001 chr3L_15165001 CanS-SH 1656 chr3L 15219639 15219678 chr3L 15219935 15219974 9 296 11.0 9.5 10.2 0.8 335 chr3L 15219639 intergenic not near genes chr3L 15219806 intergenic not near genes chr3L 15219974 intergenic not near genes chr3L_9_15215001 chr3L_15215001 CanS-SH 1657 chr3L 15232454 15232525 chr3L 15232610 15232694 6 167 4.0 3.0 3.5 1.3 240 chr3L 15232454 intergenic not near genes chr3L 15232574 intergenic not near genes chr3L 15232694 intergenic not near genes chr3L_6_15230001 chr3L_15230001 CanS-SH 1658 chr3L 15233496 15233554 chr3L 15233652 15233710 16 156 11.0 7.5 9.2 1.6 214 chr3L 15233496 intergenic not near genes chr3L 15233603 intergenic not near genes chr3L 15233710 intergenic not near genes chr3L_16_15230001 chr3L_15230001 CanS-SH 1659 chr3L 15257358 15257427 chr3L 15257646 15257715 17 288 8.0 7.5 7.8 1.9 357 chr3L 15257358 intergenic not near genes chr3L 15257536 intergenic not near genes chr3L 15257715 intergenic not near genes chr3L_17_15255001 chr3L_15255001 CanS-SH 1660 chr3L 15267884 15267905 chr3L 15268043 15268064 11 159 7.0 0.0 3.5 2.4 180 chr3L 15267884 intergenic not near genes chr3L 15267974 intergenic not near genes chr3L 15268064 intergenic not near genes chr3L_11_15265001 chr3L_15265001 CanS-SH 1661 chr3L 15280707 15280744 chr3L 15280890 15280927 12 183 0.5 10.5 5.5 1.8 220 chr3L 15280707 intergenic not near genes chr3L 15280817 intergenic not near genes chr3L 15280927 intergenic not near genes chr3L_12_15280001 chr3L_15280001 CanS-SH 1662 chr3L 15295707 15295739 chr3L 15298625 15298656 gypsy5 12 2918 21.0 9.0 15.0 0.8 2949 chr3L 15295707 intergenic not near genes chr3L 15297182 intergenic not near genes chr3L 15298656 intergenic Best4 + chr3L_12_15295001 chr3L_15295001 CanS-SH 1663 chr3L 15321980 15321998 chr3L 15322135 15322153 7 155 3.0 6.0 4.5 1.3 173 chr3L 15321980 intergenic not near genes chr3L 15322066 intergenic not near genes chr3L 15322153 intergenic not near genes chr3L_7_15320001 chr3L_15320001 CanS-SH 1664 chr3L 15333074 15333149 chr3L 15333231 15333304 12 156 6.0 3.5 4.8 2.1 230 chr3L 15333074 intergenic CR43247 + chr3L 15333189 intergenic CR43247 + chr3L 15333304 intergenic CR43247 + chr3L_12_15330001 chr3L_15330001 CanS-SH 1665 chr3L 15348042 15348078 chr3L 15348275 15348311 17 233 12.5 6.5 9.5 1.6 269 chr3L 15348042 intergenic not near genes chr3L 15348176 intergenic not near genes chr3L 15348311 intergenic not near genes chr3L_17_15345001 chr3L_15345001 CanS-SH 1666 chr3L 15358312 15358340 chr3L 15358518 15358546 5 206 15.5 0.0 7.8 0.6 234 chr3L 15358312 intergenic not near genes chr3L 15358429 intergenic not near genes chr3L 15358546 intergenic not near genes chr3L_5_15355001 chr3L_15355001 CanS-SH 1667 chr3L 15405959 15406015 chr3L 15406116 15406172 14 157 12.5 5.0 8.8 1.4 213 chr3L 15405959 intergenic not near genes chr3L 15406066 intergenic not near genes chr3L 15406172 intergenic not near genes chr3L_14_15405001 chr3L_15405001 CanS-SH 1668 chr3L 15416982 15417041 chr3L 15417227 15417286 4 245 0.0 9.5 4.8 0.7 304 chr3L 15416982 intergenic not near genes chr3L 15417134 intergenic not near genes chr3L 15417286 intergenic not near genes chr3L_4_15415001 chr3L_15415001 CanS-SH 1669 chr3L 15423694 15423740 chr3L 15426613 15426659 opus 14 2919 10.5 7.0 8.8 1.4 2965 chr3L 15423694 intergenic not near genes chr3L 15425176 intergenic not near genes chr3L 15426659 intergenic not near genes chr3L_14_15425001 chr3L_15425001 CanS-SH 1670 chr3L 15444599 15444659 chr3L 15444768 15444828 12 169 10.0 9.5 9.8 1.1 229 chr3L 15444599 intergenic not near genes chr3L 15444714 intergenic not near genes chr3L 15444828 intergenic not near genes chr3L_12_15440001 chr3L_15440001 CanS-SH 1671 chr3L 15453010 15453110 chr3L 15453256 15453352 11 245 0.0 5.0 2.5 3.1 342 chr3L 15453010 intergenic not near genes chr3L 15453181 intergenic not near genes chr3L 15453352 intergenic not near genes chr3L_11_15450001 chr3L_15450001 CanS-SH 1672 chr3L 15465965 15466133 chr3L 15466122 15466304 23 177 0.0 1.5 0.8 12.8 339 chr3L 15465965 intergenic not near genes chr3L 15466134 intergenic not near genes chr3L 15466304 intergenic not near genes chr3L_23_15465001 chr3L_15465001 CanS-SH 1673 chr3L 15466462 15466532 chr3L 15466621 15466691 31 159 0.0 10.0 5.0 5.2 229 chr3L 15466462 intergenic not near genes chr3L 15466576 intergenic not near genes chr3L 15466691 intergenic not near genes chr3L_31_15465001 chr3L_15465001 CanS-SH 1674 chr3L 15493242 15493344 chr3L 15493412 15493514 18 170 5.0 3.0 4.0 3.6 272 chr3L 15493242 exon CG12355 - chr3L 15493378 intron CG12355 - chr3L 15493514 5` UTR CG12355 - chr3L_18_15490001 chr3L_15490001 CanS-SH 1675 chr3L 15566121 15566159 chr3L 15567723 15567761 14 1602 52.5 52.0 52.2 0.3 1640 chr3L 15566121 5` UTR CG6498 + chr3L 15566941 intron CG6498 + chr3L 15567761 intron CG6498 + chr3L_14_15565001 chr3L_15565001 CanS-SH 1676 chr3L 15600128 15600196 chr3L 15600304 15600372 14 176 3.5 6.5 5.0 2.3 244 chr3L 15600128 intron RhoGAP71E + chr3L 15600250 intron RhoGAP71E + chr3L 15600372 intron RhoGAP71E + chr3L_14_15600001 chr3L_15600001 CanS-SH 1677 chr3L 15641732 15641808 chr3L 15641892 15641968 7 160 0.0 5.5 2.8 1.8 236 chr3L 15641732 intron comm3 - chr3L 15641850 intron comm3 - chr3L 15641968 intron comm3 - chr3L_7_15640001 chr3L_15640001 CanS-SH 1678 chr3L 15737306 15737344 chr3L 15737471 15737509 14 165 18.5 4.0 11.2 1.1 203 chr3L 15737306 intergenic not near genes chr3L 15737408 intergenic not near genes chr3L 15737509 intergenic not near genes chr3L_14_15735001 chr3L_15735001 CanS-SH 1679 chr3L 15769011 15769124 chr3L 15769235 15769290 4 195 0.0 13.5 6.8 0.5 279 chr3L 15769011 intergenic not near genes chr3L 15769150 intergenic not near genes chr3L 15769290 intergenic not near genes chr3L_4_15765001 chr3L_15765001 CanS-SH 1680 chr3L 15781678 15781686 chr3L 15781902 15781910 5 224 6.0 12.5 9.2 0.5 232 chr3L 15781678 intergenic not near genes chr3L 15781794 intergenic not near genes chr3L 15781910 intergenic not near genes chr3L_5_15780001 chr3L_15780001 CanS-SH 1681 chr3L 15832197 15832268 chr3L 15832353 15832424 21 156 10.5 12.0 11.2 1.7 227 chr3L 15832197 intergenic dbo +,CG12713 + chr3L 15832310 intergenic CG12713 +,dbo + chr3L 15832424 intergenic CG12713 +,dbo + chr3L_21_15830001 chr3L_15830001 CanS-SH 1682 chr3L 15840361 15840429 chr3L 15840524 15840592 15 163 10.0 2.5 6.2 2.1 231 chr3L 15840361 intron CG32150 - chr3L 15840476 intron CG32150 - chr3L 15840592 intron CG32150 - chr3L_15_15840001 chr3L_15840001 CanS-SH 1683 chr3L 15899175 15899198 chr3L 15899817 15899840 jockey 9 642 12.0 9.5 10.8 0.8 665 chr3L 15899175 intergenic pHCl - chr3L 15899508 intergenic pHCl - chr3L 15899840 intergenic sff - chr3L_9_15895001 chr3L_15895001 CanS-SH 1684 chr3L 15929178 15929227 chr3L 15938400 15938449 roo 4 9222 5.5 11.0 8.2 0.4 9271 chr3L 15929178 intron Pka-C3 - chr3L 15933814 intron Pka-C3 - chr3L 15938449 intron Pka-C3 - chr3L_4_15930001 chr3L_15930001 CanS-SH 1685 chr3L 15989160 15989223 chr3L 15989318 15989381 25 158 9.0 5.0 7.0 3.1 221 chr3L 15989160 exon Hip14 + chr3L 15989270 intron Hip14 + chr3L 15989381 intron Hip14 + chr3L_25_15985001 chr3L_15985001 CanS-SH 1686 chr3L 15991440 15991504 chr3L 15991609 15991673 29 169 9.5 11.5 10.5 2.5 233 chr3L 15991440 3` UTR Hip14 + chr3L 15991556 3` UTR Hip14 + chr3L 15991673 3` UTR Hip14 + chr3L_29_15990001 chr3L_15990001 CanS-SH 1687 chr3L 16047733 16047761 chr3L 16047887 16047915 6 154 0.0 11.5 5.8 0.9 182 chr3L 16047733 intron th - chr3L 16047824 intron th - chr3L 16047915 intron th - chr3L_6_16045001 chr3L_16045001 CanS-SH 1688 chr3L 16070668 16070762 chr3L 16070820 16070914 26 152 11.0 8.0 9.5 2.5 246 chr3L 16070668 intron Mbs + chr3L 16070791 intron Mbs + chr3L 16070914 exon Mbs + chr3L_26_16070001 chr3L_16070001 CanS-SH 1689 chr3L 16072253 16072285 chr3L 16072410 16072442 9 157 17.5 11.5 14.5 0.6 189 chr3L 16072253 intron Mbs + chr3L 16072348 intron Mbs + chr3L 16072442 intron Mbs + chr3L_9_16070001 chr3L_16070001 CanS-SH 1690 chr3L 16072291 16072345 chr3L 16072448 16072502 15 157 11.0 15.0 13.0 1.1 211 chr3L 16072291 intron Mbs + chr3L 16072396 intron Mbs + chr3L 16072502 intron Mbs + chr3L_15_16070001 chr3L_16070001 CanS-SH 1691 chr3L 16158731 16158818 chr3L 16158890 16158978 19 159 6.0 6.0 6.0 2.7 247 chr3L 16158731 intron CG5151 - chr3L 16158854 intron CG5151 - chr3L 16158978 intron CG5151 - chr3L_19_16155001 chr3L_16155001 CanS-SH 1692 chr3L 16180275 16180368 chr3L 16180452 16180545 19 177 8.0 9.0 8.5 2.0 270 chr3L 16180275 intergenic not near genes chr3L 16180410 intergenic not near genes chr3L 16180545 intergenic not near genes chr3L_19_16180001 chr3L_16180001 CanS-SH 1693 chr3L 16184053 16184083 chr3L 16188947 16188977 X-element 13 4894 16.5 12.0 14.2 0.9 4924 chr3L 16184053 intergenic not near genes chr3L 16186515 intergenic not near genes chr3L 16188977 intergenic not near genes chr3L_13_16185001 chr3L_16185001 CanS-SH 1694 chr3L 16206717 16206736 chr3L 16206870 16206889 6 153 13.5 0.0 6.8 0.8 172 chr3L 16206717 intergenic not near genes chr3L 16206803 intergenic not near genes chr3L 16206889 intergenic not near genes chr3L_6_16205001 chr3L_16205001 CanS-SH 1695 chr3L 16212750 16212844 chr3L 16212916 16213019 24 167 7.5 0.0 3.8 5.0 269 chr3L 16212750 intergenic CG13073 - chr3L 16212884 intergenic CG13073 - chr3L 16213019 intergenic CG13073 - chr3L_24_16210001 chr3L_16210001 CanS-SH 1696 chr3L 16260380 16260457 chr3L 16260539 16260615 6 158 0.0 7.5 3.8 1.2 235 chr3L 16260380 intergenic not near genes chr3L 16260498 intergenic not near genes chr3L 16260615 intergenic not near genes chr3L_6_16260001 chr3L_16260001 CanS-SH 1697 chr3L 16336222 16336253 chr3L 16336436 16336467 13 214 21.0 6.0 13.5 0.9 245 chr3L 16336222 intergenic not near genes chr3L 16336344 intergenic not near genes chr3L 16336467 intergenic not near genes chr3L_13_16335001 chr3L_16335001 CanS-SH 1698 chr3L 16359881 16360004 chr3L 16360226 16360330 11 343 0.0 4.5 2.2 3.4 449 chr3L 16359881 intron CG45057 - chr3L 16360106 intron CG45057 - chr3L 16360330 intron CG45057 - chr3L_11_16360001 chr3L_16360001 CanS-SH 1699 chr3L 16437016 16437096 chr3L 16437177 16437257 28 161 4.5 8.0 6.2 3.9 241 chr3L 16437016 intron,intron CG33158 +,dsx-c73A - chr3L 16437136 intron,intron CG33158 +,dsx-c73A - chr3L 16437257 intron,intron CG33158 +,dsx-c73A - chr3L_28_16435001 chr3L_16435001 CanS-SH 1700 chr3L 16443776 16443824 chr3L 16446191 16446239 Doc 20 2415 18.0 6.0 12.0 1.5 2463 chr3L 16443776 intron,intron CG33158 +,dsx-c73A - chr3L 16445008 intron,intron CG33158 +,dsx-c73A - chr3L 16446239 intron,intron CG33158 +,dsx-c73A - chr3L_20_16445001 chr3L_16445001 CanS-SH 1701 chr3L 16450000 16450037 chr3L 16450160 16450197 13 160 8.5 12.0 10.2 1.2 197 chr3L 16450000 intron,intron CG33158 +,dsx-c73A - chr3L 16450098 intron,intron CG33158 +,dsx-c73A - chr3L 16450197 intron,exon CG33158 +,dsx-c73A - chr3L_13_16450001 chr3L_16450001 CanS-SH 1702 chr3L 16457461 16457552 chr3L 16457631 16457722 31 170 10.5 8.0 9.2 3.0 261 chr3L 16457461 intron CG33158 + chr3L 16457592 intron CG33158 + chr3L 16457722 intron CG33158 + chr3L_31_16455001 chr3L_16455001 CanS-SH 1703 chr3L 16487397 16487454 chr3L 16487550 16487607 19 153 10.0 8.0 9.0 1.9 210 chr3L 16487397 intron CG33158 + chr3L 16487502 intron CG33158 + chr3L 16487607 intron CG33158 + chr3L_19_16485001 chr3L_16485001 CanS-SH 1704 chr3L 16493913 16493955 chr3L 16494505 16494546 jockey 12 591 12.0 5.0 8.5 1.3 633 chr3L 16493913 intron,exon,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494230 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494546 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_12_16490001 chr3L_16490001 CanS-SH 1705 chr3L 16503576 16503650 chr3L 16503728 16503802 19 152 5.0 9.0 7.0 2.4 226 chr3L 16503576 intron CG43373 - chr3L 16503689 intron CG43373 - chr3L 16503802 intron CG43373 - chr3L_19_16500001 chr3L_16500001 CanS-SH 1706 chr3L 16533503 16533580 chr3L 16533689 16533766 8 186 0.0 6.5 3.2 1.9 263 chr3L 16533503 intron CG43373 - chr3L 16533634 intron CG43373 - chr3L 16533766 intron CG43373 - chr3L_8_16530001 chr3L_16530001 CanS-SH 1707 chr3L 16539991 16540063 chr3L 16540154 16540226 30 163 10.5 9.0 9.8 2.8 235 chr3L 16539991 intron CG43373 - chr3L 16540108 intron CG43373 - chr3L 16540226 intron CG43373 - chr3L_30_16540001 chr3L_16540001 CanS-SH 1708 chr3L 16563161 16563330 chr3L 16563317 16563493 12 159 0.0 0.0 0.0 12.0 332 chr3L 16563161 intergenic Mipp1 - chr3L 16563327 intergenic Mipp1 - chr3L 16563493 intergenic Mipp1 - chr3L_12_16560001 chr3L_16560001 CanS-SH 1709 chr3L 16610621 16610698 chr3L 16610780 16610858 34 160 10.0 6.0 8.0 3.8 237 chr3L 16610621 intergenic Su(P) -,Prosbeta6 - chr3L 16610740 exon Su(P) - chr3L 16610858 intron Su(P) - chr3L_34_16610001 chr3L_16610001 CanS-SH 1710 chr3L 16616448 16616488 chr3L 16621851 16621891 297 18 5403 18.5 8.0 13.2 1.3 5443 chr3L 16616448 3` UTR Abl - chr3L 16619170 3` UTR Abl - chr3L 16621891 3` UTR Abl - chr3L_18_16615001 chr3L_16615001 CanS-SH 1711 chr3L 16632162 16632256 chr3L 16632423 16632525 8 265 2.5 3.0 2.8 2.1 363 chr3L 16632162 intron Abl - chr3L 16632344 intron Abl - chr3L 16632525 intron Abl - chr3L_8_16630001 chr3L_16630001 CanS-SH 1712 chr3L 16659497 16659533 chr3L 16659653 16659689 16 156 10.5 0.0 5.2 2.6 192 chr3L 16659497 intron Baldspot - chr3L 16659593 intron Baldspot - chr3L 16659689 intron Baldspot - chr3L_16_16655001 chr3L_16655001 CanS-SH 1713 chr3L 16683965 16683996 chr3L 16689261 16689292 copia 7 5296 23.5 8.0 15.8 0.4 5327 chr3L 16683965 intron,intron Lasp -,CG43954 - chr3L 16686628 intron,intron Lasp -,CG43954 - chr3L 16689292 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_7_16685001 chr3L_16685001 CanS-SH 1714 chr3L 16714774 16714850 chr3L 16714933 16715009 19 159 4.5 13.0 8.8 1.9 235 chr3L 16714774 intron Dab + chr3L 16714892 intron Dab + chr3L 16715009 intron Dab + chr3L_19_16710001 chr3L_16710001 CanS-SH 1715 chr3L 16760776 16760815 chr3L 16760991 16761030 13 215 19.0 6.5 12.8 0.9 254 chr3L 16760776 intergenic not near genes chr3L 16760903 intergenic not near genes chr3L 16761030 intergenic not near genes chr3L_13_16760001 chr3L_16760001 CanS-SH 1716 chr3L 16807994 16808073 chr3L 16808145 16808227 19 154 8.0 6.5 7.2 2.3 233 chr3L 16807994 intron nudC + chr3L 16808110 intron nudC + chr3L 16808227 intron nudC + chr3L_19_16805001 chr3L_16805001 CanS-SH 1717 chr3L 16815785 16815862 chr3L 16815946 16816023 21 161 8.0 9.0 8.5 2.2 238 chr3L 16815785 intron,intron nudC +,CG13024 - chr3L 16815904 intron,intron nudC +,CG13024 - chr3L 16816023 intron,intron nudC +,CG13024 - chr3L_21_16815001 chr3L_16815001 CanS-SH 1718 chr3L 16831012 16831090 chr3L 16831175 16831253 26 163 5.5 2.5 4.0 5.2 241 chr3L 16831012 intergenic not near genes chr3L 16831132 intergenic not near genes chr3L 16831253 intergenic not near genes chr3L_26_16830001 chr3L_16830001 CanS-SH 1719 chr3L 16844956 16845002 chr3L 16845144 16845190 15 188 15.5 8.5 12.0 1.2 234 chr3L 16844956 5` UTR CG9669 - chr3L 16845073 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845190 intergenic CG9715 +,CG9669 - chr3L_15_16845001 chr3L_16845001 CanS-SH 1720 chr3L 16870793 16870849 chr3L 16870960 16871016 15 167 13.5 0.0 6.8 1.9 223 chr3L 16870793 intron Lmpt + chr3L 16870904 intron Lmpt + chr3L 16871016 intron Lmpt + chr3L_15_16870001 chr3L_16870001 CanS-SH 1721 chr3L 16873279 16873332 chr3L 16873459 16873512 13 180 13.5 11.5 12.5 1.0 233 chr3L 16873279 intron Lmpt + chr3L 16873396 intron Lmpt + chr3L 16873512 intron Lmpt + chr3L_13_16870001 chr3L_16870001 CanS-SH 1722 chr3L 16894717 16894810 chr3L 16894870 16894970 10 158 5.5 0.0 2.8 2.6 253 chr3L 16894717 intron Lmpt + chr3L 16894844 intron Lmpt + chr3L 16894970 intron Lmpt + chr3L_10_16890001 chr3L_16890001 CanS-SH 1723 chr3L 16941330 16941431 chr3L 16941506 16941607 21 176 4.0 9.5 6.8 2.7 277 chr3L 16941330 intron Cpr73D - chr3L 16941468 intron Cpr73D - chr3L 16941607 exon Cpr73D - chr3L_21_16940001 chr3L_16940001 CanS-SH 1724 chr3L 16945672 16945705 chr3L 16954900 16954933 roo 16 9228 12.5 9.5 11.0 1.3 9261 chr3L 16945672 exon Obp73a + chr3L 16950302 intergenic not near genes chr3L 16954933 5` UTR Nc73EF + chr3L_16_16950001 chr3L_16950001 CanS-SH 1725 chr3L 17026723 17026815 chr3L 17026879 17026971 14 156 9.5 8.0 8.8 1.4 248 chr3L 17026723 exon Fit2 + chr3L 17026847 3` UTR Fit2 + chr3L 17026971 3` UTR Fit2 + chr3L_14_17025001 chr3L_17025001 CanS-SH 1726 chr3L 17027091 17027128 chr3L 17027257 17027295 7 166 20.0 7.0 13.5 0.5 204 chr3L 17027091 3` UTR Fit2 + chr3L 17027193 intergenic Fit2 +,CG7730 + chr3L 17027295 intergenic Fit2 +,CG7730 + chr3L_7_17025001 chr3L_17025001 CanS-SH 1727 chr3L 17034872 17034913 chr3L 17035130 17035176 G2 8 260 10.0 6.0 8.0 0.9 304 chr3L 17034872 intergenic not near genes chr3L 17035024 intergenic not near genes chr3L 17035176 intergenic beg + chr3L_8_17035001 chr3L_17035001 CanS-SH 1728 chr3L 17084939 17084979 chr3L 17094163 17094203 roo 15 9224 21.0 13.0 17.0 0.8 9264 chr3L 17084939 intron Rbp6 - chr3L 17089571 intron Rbp6 - chr3L 17094203 intron Rbp6 - chr3L_15_17085001 chr3L_17085001 CanS-SH 1729 chr3L 17165526 17165585 chr3L 17165694 17165753 19 168 12.0 9.5 10.8 1.6 227 chr3L 17165526 intron Rbp6 - chr3L 17165640 intron Rbp6 - chr3L 17165753 intron Rbp6 - chr3L_19_17165001 chr3L_17165001 CanS-SH 1730 chr3L 17222400 17222470 chr3L 17222648 17222722 9 250 10.5 6.5 8.5 0.9 322 chr3L 17222400 intron Rbp6 - chr3L 17222561 intron Rbp6 - chr3L 17222722 intron Rbp6 - chr3L_9_17220001 chr3L_17220001 CanS-SH 1731 chr3L 17233171 17233201 chr3L 17233358 17233388 12 187 0.0 5.5 2.8 3.2 217 chr3L 17233171 intron Rbp6 - chr3L 17233280 intron Rbp6 - chr3L 17233388 intron Rbp6 - chr3L_12_17230001 chr3L_17230001 CanS-SH 1732 chr3L 17272170 17272262 chr3L 17272378 17272470 9 208 5.0 8.5 6.8 1.2 300 chr3L 17272170 intergenic not near genes chr3L 17272320 intergenic not near genes chr3L 17272470 intergenic not near genes chr3L_9_17270001 chr3L_17270001 CanS-SH 1733 chr3L 17367367 17367457 chr3L 17367536 17367626 20 169 2.5 3.0 2.8 5.3 259 chr3L 17367367 intergenic CR45688 +,Cad74A - chr3L 17367496 intergenic CR45688 +,Cad74A - chr3L 17367626 intergenic Cad74A -,CR45688 + chr3L_20_17365001 chr3L_17365001 CanS-SH 1734 chr3L 17461956 17461994 chr3L 17462176 17462214 11 220 5.0 8.0 6.5 1.5 258 chr3L 17461956 intergenic not near genes chr3L 17462085 intergenic not near genes chr3L 17462214 intergenic not near genes chr3L_11_17460001 chr3L_17460001 CanS-SH 1735 chr3L 17516919 17516943 chr3L 17524552 17524576 412 10 7633 17.5 8.5 13.0 0.7 7657 chr3L 17516919 intron CG7564 + chr3L 17520748 intron CG7564 + chr3L 17524576 3` UTR CG7564 + chr3L_10_17520001 chr3L_17520001 CanS-SH 1736 chr3L 17585374 17585387 chr3L 17585625 17585638 7 251 42.5 59.5 51.0 0.1 264 chr3L 17585374 intron Eip74EF - chr3L 17585506 intron Eip74EF - chr3L 17585638 intron Eip74EF - chr3L_7_17585001 chr3L_17585001 CanS-SH 1737 chr3L 17586914 17586944 chr3L 17587122 17587152 10 208 14.5 9.0 11.8 0.8 238 chr3L 17586914 intron Eip74EF - chr3L 17587033 intron Eip74EF - chr3L 17587152 intron Eip74EF - chr3L_10_17585001 chr3L_17585001 CanS-SH 1738 chr3L 17646786 17646794 chr3L 17646938 17646946 5 152 21.0 10.5 15.8 0.3 160 chr3L 17646786 intergenic CG43085 - chr3L 17646866 intergenic CG43085 - chr3L 17646946 intergenic CG43085 -,Ndfip - chr3L_5_17645001 chr3L_17645001 CanS-SH 1739 chr3L 17678825 17678860 chr3L 17678984 17679019 12 159 11.5 0.0 5.8 1.8 194 chr3L 17678825 intron CG34251 + chr3L 17678922 intron CG34251 + chr3L 17679019 intron CG34251 + chr3L_12_17675001 chr3L_17675001 CanS-SH 1740 chr3L 17730790 17730829 chr3L 17738195 17738234 mdg1 10 7405 14.5 13.5 14.0 0.7 7444 chr3L 17730790 intron Ccn + chr3L 17734512 intron Ccn + chr3L 17738234 intron Ccn + chr3L_10_17730001 chr3L_17730001 CanS-SH 1741 chr3L 17781854 17781924 chr3L 17782019 17782089 30 165 13.0 10.5 11.8 2.3 235 chr3L 17781854 intergenic not near genes chr3L 17781972 intergenic not near genes chr3L 17782089 intergenic not near genes chr3L_30_17780001 chr3L_17780001 CanS-SH 1742 chr3L 17790545 17790631 chr3L 17790885 17790971 20 340 6.5 6.0 6.2 2.8 426 chr3L 17790545 intergenic not near genes chr3L 17790758 intergenic CG42815 - chr3L 17790971 intergenic CG42815 - chr3L_20_17790001 chr3L_17790001 CanS-SH 1743 chr3L 17791860 17791914 chr3L 17792019 17792065 9 158 3.0 3.5 3.2 2.1 205 chr3L 17791860 intergenic CG42816 -,CG42815 - chr3L 17791962 intergenic CG42816 -,CG42815 - chr3L 17792065 intergenic CG42816 - chr3L_9_17790001 chr3L_17790001 CanS-SH 1744 chr3L 17799749 17799788 chr3L 17801611 17801650 S-element 14 1862 18.0 7.5 12.8 1.0 1901 chr3L 17799749 intron NUCB1 - chr3L 17800700 intron NUCB1 - chr3L 17801650 intron NUCB1 - chr3L_14_17800001 chr3L_17800001 CanS-SH 1745 chr3L 17837564 17837650 chr3L 17837726 17837813 24 163 7.0 7.5 7.2 2.9 249 chr3L 17837564 exon Grd + chr3L 17837688 intron Grd + chr3L 17837813 exon Grd + chr3L_24_17835001 chr3L_17835001 CanS-SH 1746 chr3L 17884619 17884703 chr3L 17884794 17884877 17 175 8.0 8.5 8.2 1.8 258 chr3L 17884619 intergenic CG5506 - chr3L 17884748 intergenic CG5506 - chr3L 17884877 intergenic not near genes chr3L_17_17880001 chr3L_17880001 CanS-SH 1747 chr3L 17918310 17918347 chr3L 17921188 17921225 opus 8 2878 18.5 10.5 14.5 0.5 2915 chr3L 17918310 intergenic not near genes chr3L 17919768 intergenic not near genes chr3L 17921225 intergenic not near genes chr3L_8_17915001 chr3L_17915001 CanS-SH 1748 chr3L 17921804 17921857 chr3L 17921966 17922019 22 162 11.5 10.0 10.8 1.9 215 chr3L 17921804 intergenic not near genes chr3L 17921912 intergenic not near genes chr3L 17922019 intergenic not near genes chr3L_22_17920001 chr3L_17920001 CanS-SH 1749 chr3L 17991514 17991558 chr3L 17991667 17991711 15 153 16.5 8.5 12.5 1.1 197 chr3L 17991514 intron Eip75B - chr3L 17991612 intron Eip75B - chr3L 17991711 intron Eip75B - chr3L_15_17990001 chr3L_17990001 CanS-SH 1750 chr3L 18013903 18013919 chr3L 18014067 18014083 6 164 16.5 1.0 8.8 0.6 180 chr3L 18013903 intron Eip75B - chr3L 18013993 intron Eip75B - chr3L 18014083 intron Eip75B - chr3L_6_18010001 chr3L_18010001 CanS-SH 1751 chr3L 18027021 18027057 chr3L 18027179 18027215 7 158 6.5 9.5 8.0 0.8 194 chr3L 18027021 intron Eip75B - chr3L 18027118 intron Eip75B - chr3L 18027215 intron Eip75B - chr3L_7_18025001 chr3L_18025001 CanS-SH 1752 chr3L 18029883 18029979 chr3L 18030035 18030131 15 152 3.5 0.5 2.0 5.0 248 chr3L 18029883 intron Eip75B - chr3L 18030007 intron Eip75B - chr3L 18030131 intron Eip75B - chr3L_15_18030001 chr3L_18030001 CanS-SH 1753 chr3L 18041227 18041292 chr3L 18041397 18041462 20 170 12.0 8.5 10.2 1.8 235 chr3L 18041227 intron,3` UTR Eip75B -,CG32192 + chr3L 18041344 intron,intron Eip75B -,CG32192 + chr3L 18041462 intron,intron Eip75B -,CG32192 + chr3L_20_18040001 chr3L_18040001 CanS-SH 1754 chr3L 18041898 18042163 chr3L 18042064 18042318 5 159 0.0 0.0 0.0 5.0 420 chr3L 18041898 intron Eip75B - chr3L 18042108 intron Eip75B - chr3L 18042318 intron Eip75B - chr3L_5_18040001 chr3L_18040001 CanS-SH 1755 chr3L 18047641 18047688 chr3L 18056773 18056820 roo 19 9132 0.0 5.0 2.5 5.4 9179 chr3L 18047641 intron Eip75B - chr3L 18052230 intron Eip75B - chr3L 18056820 intron Eip75B - chr3L_19_18050001 chr3L_18050001 CanS-SH 1756 chr3L 18063997 18064077 chr3L 18064157 18064237 9 160 4.5 8.5 6.5 1.2 240 chr3L 18063997 intron Eip75B - chr3L 18064117 intron Eip75B - chr3L 18064237 intron Eip75B - chr3L_9_18060001 chr3L_18060001 CanS-SH 1757 chr3L 18092710 18092735 chr3L 18092900 18092925 11 190 17.0 0.0 8.5 1.2 215 chr3L 18092710 intron CG13698 - chr3L 18092818 intron CG13698 - chr3L 18092925 intron CG13698 - chr3L_11_18090001 chr3L_18090001 CanS-SH 1758 chr3L 18119556 18119614 chr3L 18119743 18119801 12 187 5.0 7.0 6.0 1.7 245 chr3L 18119556 intron CG7341 + chr3L 18119678 intron CG7341 + chr3L 18119801 5` UTR CG7341 + chr3L_12_18115001 chr3L_18115001 CanS-SH 1759 chr3L 18124340 18124429 chr3L 18124499 18124588 33 159 0.0 4.5 2.2 10.3 248 chr3L 18124340 intergenic not near genes chr3L 18124464 intergenic not near genes chr3L 18124588 intergenic not near genes chr3L_33_18120001 chr3L_18120001 CanS-SH 1760 chr3L 18145884 18145888 chr3L 18146035 18146039 4 151 0.0 4.0 2.0 1.3 155 chr3L 18145884 intergenic gk + chr3L 18145962 intergenic not near genes chr3L 18146039 intergenic not near genes chr3L_4_18145001 chr3L_18145001 CanS-SH 1761 chr3L 18157723 18157730 chr3L 18157910 18157917 4 187 6.5 12.5 9.5 0.4 194 chr3L 18157723 intron CG13699 - chr3L 18157820 intron CG13699 - chr3L 18157917 intron CG13699 - chr3L_4_18155001 chr3L_18155001 CanS-SH 1762 chr3L 18172675 18172704 chr3L 18172826 18172855 11 151 8.0 19.0 13.5 0.8 180 chr3L 18172675 intron W - chr3L 18172765 intron W - chr3L 18172855 intron W - chr3L_11_18170001 chr3L_18170001 CanS-SH 1763 chr3L 18180884 18180953 chr3L 18181042 18181111 13 158 13.5 5.0 9.2 1.3 227 chr3L 18180884 intron W - chr3L 18180998 intron W - chr3L 18181111 intron W - chr3L_13_18180001 chr3L_18180001 CanS-SH 1764 chr3L 18207840 18207922 chr3L 18208000 18208105 14 162 4.5 0.0 2.2 4.4 265 chr3L 18207840 intergenic not near genes chr3L 18207972 intergenic not near genes chr3L 18208105 intergenic not near genes chr3L_14_18205001 chr3L_18205001 CanS-SH 1765 chr3L 18226025 18226099 chr3L 18226185 18226259 4 160 0.0 6.5 3.2 1.0 234 chr3L 18226025 intergenic not near genes chr3L 18226142 intergenic not near genes chr3L 18226259 intergenic not near genes chr3L_4_18225001 chr3L_18225001 CanS-SH 1766 chr3L 18251687 18251776 chr3L 18251855 18251944 19 168 4.0 8.0 6.0 2.7 257 chr3L 18251687 intergenic CheA75a + chr3L 18251816 intergenic CheA75a + chr3L 18251944 intergenic CheA75a + chr3L_19_18250001 chr3L_18250001 CanS-SH 1767 chr3L 18253647 18253713 chr3L 18253931 18253998 9 284 4.5 10.5 7.5 1.1 351 chr3L 18253647 intergenic not near genes chr3L 18253822 intergenic not near genes chr3L 18253998 intergenic not near genes chr3L_9_18250001 chr3L_18250001 CanS-SH 1768 chr3L 18257719 18257790 chr3L 18258060 18258130 7 341 0.0 11.5 5.8 1.0 411 chr3L 18257719 intergenic not near genes chr3L 18257924 intergenic not near genes chr3L 18258130 intergenic not near genes chr3L_7_18255001 chr3L_18255001 CanS-SH 1769 chr3L 18262399 18262487 chr3L 18262557 18262651 29 159 7.0 3.5 5.2 4.7 252 chr3L 18262399 intergenic not near genes chr3L 18262525 intergenic not near genes chr3L 18262651 intergenic not near genes chr3L_29_18260001 chr3L_18260001 CanS-SH 1770 chr3L 18321004 18321089 chr3L 18321165 18321250 16 161 2.5 6.5 4.5 2.9 246 chr3L 18321004 intergenic not near genes chr3L 18321127 intergenic not near genes chr3L 18321250 intergenic not near genes chr3L_16_18320001 chr3L_18320001 CanS-SH 1771 chr3L 18347745 18347836 chr3L 18347905 18347998 16 161 10.5 5.5 8.0 1.8 253 chr3L 18347745 intergenic not near genes chr3L 18347872 intergenic not near genes chr3L 18347998 intergenic not near genes chr3L_16_18345001 chr3L_18345001 CanS-SH 1772 chr3L 18395650 18395675 chr3L 18395803 18395828 7 153 7.5 7.5 7.5 0.8 178 chr3L 18395650 intergenic not near genes chr3L 18395739 intergenic not near genes chr3L 18395828 intergenic not near genes chr3L_7_18395001 chr3L_18395001 CanS-SH 1773 chr3L 18406058 18406147 chr3L 18406209 18406298 15 151 4.0 7.5 5.8 2.2 240 chr3L 18406058 intergenic not near genes chr3L 18406178 intergenic not near genes chr3L 18406298 intergenic not near genes chr3L_15_18405001 chr3L_18405001 CanS-SH 1774 chr3L 18408675 18408755 chr3L 18408836 18408916 17 161 7.5 7.0 7.2 2.1 241 chr3L 18408675 intergenic not near genes chr3L 18408796 intergenic not near genes chr3L 18408916 intergenic not near genes chr3L_17_18405001 chr3L_18405001 CanS-SH 1775 chr3L 18479197 18479262 chr3L 18479350 18479414 19 152 10.0 7.0 8.5 2.0 217 chr3L 18479197 5` UTR CR44673 + chr3L 18479306 intergenic CR44673 + chr3L 18479414 intergenic CR44673 + chr3L_19_18475001 chr3L_18475001 CanS-SH 1776 chr3L 18506085 18506100 chr3L 18509623 18509638 F-element 8 3538 16.5 12.0 14.2 0.5 3553 chr3L 18506085 intergenic not near genes chr3L 18507862 intergenic not near genes chr3L 18509638 intergenic not near genes chr3L_8_18505001 chr3L_18505001 CanS-SH 1777 chr3L 18528569 18528605 chr3L 18537805 18537841 roo 12 9236 18.0 9.0 13.5 0.8 9272 chr3L 18528569 intergenic not near genes chr3L 18533205 intergenic not near genes chr3L 18537841 intergenic not near genes chr3L_12_18530001 chr3L_18530001 CanS-SH 1778 chr3L 18538559 18538602 chr3L 18539127 18539170 15 568 13.0 8.5 10.8 1.3 611 chr3L 18538559 intergenic not near genes chr3L 18538864 intergenic not near genes chr3L 18539170 intergenic not near genes chr3L_15_18535001 chr3L_18535001 CanS-SH 1779 chr3L 18566957 18567050 chr3L 18567118 18567211 21 161 7.0 3.0 5.0 3.5 254 chr3L 18566957 intron AstC-R1 + chr3L 18567084 intron AstC-R1 + chr3L 18567211 intron AstC-R1 + chr3L_21_18565001 chr3L_18565001 CanS-SH 1780 chr3L 18585497 18585554 chr3L 18585648 18585705 17 151 13.5 11.0 12.2 1.3 208 chr3L 18585497 intergenic not near genes chr3L 18585601 intergenic not near genes chr3L 18585705 intergenic not near genes chr3L_17_18585001 chr3L_18585001 CanS-SH 1781 chr3L 18590194 18590272 chr3L 18590351 18590429 17 157 7.5 9.0 8.2 1.8 235 chr3L 18590194 intergenic CG7271 + chr3L 18590312 intergenic CG7271 + chr3L 18590429 intergenic CG7271 + chr3L_17_18590001 chr3L_18590001 CanS-SH 1782 chr3L 18593884 18593981 chr3L 18595939 18596034 Doc 8 2055 5.5 0.0 2.8 2.1 2150 chr3L 18593884 intergenic term - chr3L 18594959 intergenic not near genes chr3L 18596034 intergenic CR45389 + chr3L_8_18590001 chr3L_18590001 CanS-SH 1783 chr3L 18603077 18603137 chr3L 18603231 18603291 4 154 0.0 5.0 2.5 1.1 214 chr3L 18603077 intron,intron CG13380 -,CG4174 - chr3L 18603184 intron,intron CG13380 -,CG4174 - chr3L 18603291 intron,intron CG13380 -,CG4174 - chr3L_4_18600001 chr3L_18600001 CanS-SH 1784 chr3L 18649569 18649653 chr3L 18650007 18650091 19 438 9.5 11.5 10.5 1.7 522 chr3L 18649569 intron MYPT-75D + chr3L 18649830 intron MYPT-75D + chr3L 18650091 intron MYPT-75D + chr3L_19_18645001 chr3L_18645001 CanS-SH 1785 chr3L 18710696 18710737 chr3L 18718723 18718764 Stalker2 13 8027 21.5 8.5 15.0 0.8 8068 chr3L 18710696 intergenic not near genes chr3L 18714730 intergenic not near genes chr3L 18718764 intergenic not near genes chr3L_13_18710001 chr3L_18710001 CanS-SH 1786 chr3L 18741925 18741971 chr3L 18742086 18742132 20 161 17.5 10.0 13.8 1.4 207 chr3L 18741925 intergenic not near genes chr3L 18742028 intergenic not near genes chr3L 18742132 intergenic not near genes chr3L_20_18740001 chr3L_18740001 CanS-SH 1787 chr3L 18743461 18743477 chr3L 18743644 18743660 5 183 8.5 15.5 12.0 0.4 199 chr3L 18743461 intergenic not near genes chr3L 18743560 intergenic not near genes chr3L 18743660 intergenic not near genes chr3L_5_18740001 chr3L_18740001 CanS-SH 1788 chr3L 18772353 18772382 chr3L 18781109 18781138 roo 7 8756 12.5 8.5 10.5 0.6 8785 chr3L 18772353 intron ftz-f1 - chr3L 18776746 intron ftz-f1 - chr3L 18781138 intron ftz-f1 - chr3L_7_18775001 chr3L_18775001 CanS-SH 1789 chr3L 18784324 18784404 chr3L 18784488 18784568 25 164 7.0 8.0 7.5 2.9 244 chr3L 18784324 intron ftz-f1 - chr3L 18784446 intron ftz-f1 - chr3L 18784568 intron ftz-f1 - chr3L_25_18780001 chr3L_18780001 CanS-SH 1790 chr3L 18792510 18792591 chr3L 18792667 18792748 28 157 6.0 13.5 9.8 2.6 238 chr3L 18792510 intron ftz-f1 - chr3L 18792629 intron ftz-f1 - chr3L 18792748 intron ftz-f1 - chr3L_28_18790001 chr3L_18790001 CanS-SH 1791 chr3L 18797278 18797328 chr3L 18797437 18797487 14 159 9.0 10.0 9.5 1.3 209 chr3L 18797278 intron ftz-f1 - chr3L 18797382 intron ftz-f1 - chr3L 18797487 intron ftz-f1 - chr3L_14_18795001 chr3L_18795001 CanS-SH 1792 chr3L 18831621 18831636 chr3L 18831850 18831865 8 229 9.5 5.5 7.5 0.9 244 chr3L 18831621 exon Indy - chr3L 18831743 intron Indy - chr3L 18831865 intron Indy - chr3L_8_18830001 chr3L_18830001 CanS-SH 1793 chr3L 18833719 18833756 chr3L 18834958 18834995 1360 20 1239 19.0 7.0 13.0 1.4 1276 chr3L 18833719 intron Indy - chr3L 18834357 intron Indy - chr3L 18834995 intron Indy - chr3L_20_18830001 chr3L_18830001 CanS-SH 1794 chr3L 18843806 18843885 chr3L 18843979 18844058 8 173 10.5 9.5 10.0 0.7 252 chr3L 18843806 intron Indy - chr3L 18843932 intron Indy - chr3L 18844058 intron Indy - chr3L_8_18840001 chr3L_18840001 CanS-SH 1795 chr3L 18853950 18854023 chr3L 18854126 18854199 15 176 4.5 8.0 6.2 2.1 249 chr3L 18853950 intergenic CR45387 + chr3L 18854074 intergenic CR45387 + chr3L 18854199 intergenic CR45387 + chr3L_15_18850001 chr3L_18850001 CanS-SH 1796 chr3L 18868894 18868937 chr3L 18869050 18869093 4 156 14.0 10.5 12.2 0.3 199 chr3L 18868894 3` UTR Dysb + chr3L 18868994 3` UTR Dysb + chr3L 18869093 3` UTR Dysb + chr3L_4_18865001 chr3L_18865001 CanS-SH 1797 chr3L 18885967 18885992 chr3L 18886118 18886143 14 151 7.5 17.0 12.2 1.1 176 chr3L 18885967 intron CG3961 - chr3L 18886055 intron CG3961 - chr3L 18886143 intron CG3961 - chr3L_14_18885001 chr3L_18885001 CanS-SH 1798 chr3L 18933560 18933653 chr3L 18933729 18933821 19 168 6.5 7.5 7.0 2.4 261 chr3L 18933560 intron CG32204 - chr3L 18933690 intron CG32204 - chr3L 18933821 intron CG32204 - chr3L_19_18930001 chr3L_18930001 CanS-SH 1799 chr3L 18959933 18959997 chr3L 18960089 18960153 26 156 10.5 7.5 9.0 2.6 220 chr3L 18959933 intergenic not near genes chr3L 18960043 intergenic not near genes chr3L 18960153 intergenic not near genes chr3L_26_18960001 chr3L_18960001 CanS-SH 1800 chr3L 18962583 18962620 chr3L 18962738 18962775 17 155 8.5 19.0 13.8 1.1 192 chr3L 18962583 intergenic not near genes chr3L 18962679 intergenic not near genes chr3L 18962775 intergenic not near genes chr3L_17_18960001 chr3L_18960001 CanS-SH 1801 chr3L 18969479 18969553 chr3L 18969630 18969704 20 151 9.0 6.0 7.5 2.4 225 chr3L 18969479 intergenic not near genes chr3L 18969592 intergenic not near genes chr3L 18969704 intergenic not near genes chr3L_20_18965001 chr3L_18965001 CanS-SH 1802 chr3L 19008786 19008819 chr3L 19009199 19009232 jockey 11 413 11.0 12.0 11.5 0.9 446 chr3L 19008786 intron nkd - chr3L 19009009 intron nkd - chr3L 19009232 intron nkd - chr3L_11_19005001 chr3L_19005001 CanS-SH 1803 chr3L 19015112 19015214 chr3L 19015271 19015368 22 158 7.5 6.5 7.0 2.8 256 chr3L 19015112 intron nkd - chr3L 19015240 intron nkd - chr3L 19015368 intron nkd - chr3L_22_19015001 chr3L_19015001 CanS-SH 1804 chr3L 19111343 19111403 chr3L 19111503 19111563 27 160 7.0 7.0 7.0 3.4 220 chr3L 19111343 intron CG14082 - chr3L 19111453 intron CG14082 - chr3L 19111563 intron CG14082 - chr3L_27_19110001 chr3L_19110001 CanS-SH 1805 chr3L 19115578 19115612 chr3L 19115833 19115867 BS 14 255 15.0 6.5 10.8 1.2 289 chr3L 19115578 intron CG14082 - chr3L 19115722 intron CG14082 - chr3L 19115867 intron CG14082 - chr3L_14_19115001 chr3L_19115001 CanS-SH 1806 chr3L 19116980 19117015 chr3L 19124502 19124537 mdg1 14 7522 18.5 9.0 13.8 0.9 7557 chr3L 19116980 intron CG14082 - chr3L 19120758 intron CG14082 - chr3L 19124537 intron CG14082 - chr3L_14_19120001 chr3L_19120001 CanS-SH 1807 chr3L 19135029 19135071 chr3L 19135256 19135298 8 227 15.0 10.0 12.5 0.6 269 chr3L 19135029 intron CG14082 - chr3L 19135164 intron CG14082 - chr3L 19135298 intron CG14082 - chr3L_8_19135001 chr3L_19135001 CanS-SH 1808 chr3L 19186371 19186425 chr3L 19186538 19186592 10 167 6.0 8.0 7.0 1.2 221 chr3L 19186371 intron fz2 - chr3L 19186482 intron fz2 - chr3L 19186592 intron fz2 - chr3L_10_19185001 chr3L_19185001 CanS-SH 1809 chr3L 19207996 19208037 chr3L 19209445 19209486 Doc 18 1449 5.0 6.5 5.8 2.6 1490 chr3L 19207996 intron fz2 - chr3L 19208741 intron fz2 - chr3L 19209486 intron fz2 - chr3L_18_19205001 chr3L_19205001 CanS-SH 1810 chr3L 19214704 19214788 chr3L 19214871 19214955 12 167 5.5 4.5 5.0 2.0 251 chr3L 19214704 intron fz2 - chr3L 19214830 intron fz2 - chr3L 19214955 intron fz2 - chr3L_12_19210001 chr3L_19210001 CanS-SH 1811 chr3L 19218429 19218500 chr3L 19218584 19218655 27 155 11.5 8.0 9.8 2.5 226 chr3L 19218429 intron fz2 - chr3L 19218542 intron fz2 - chr3L 19218655 intron fz2 - chr3L_27_19215001 chr3L_19215001 CanS-SH 1812 chr3L 19282201 19282270 chr3L 19282372 19282441 23 171 6.5 10.0 8.2 2.5 240 chr3L 19282201 3` UTR Gbs-76A - chr3L 19282321 3` UTR Gbs-76A - chr3L 19282441 3` UTR Gbs-76A - chr3L_23_19280001 chr3L_19280001 CanS-SH 1813 chr3L 19342686 19342777 chr3L 19342852 19342943 14 166 6.0 6.5 6.2 1.9 257 chr3L 19342686 3` UTR CG32206 - chr3L 19342814 3` UTR CG32206 - chr3L 19342943 3` UTR CG32206 - chr3L_14_19340001 chr3L_19340001 CanS-SH 1814 chr3L 19346795 19346845 chr3L 19346956 19347006 23 161 6.5 11.5 9.0 2.3 211 chr3L 19346795 intron CG32206 - chr3L 19346900 intron CG32206 - chr3L 19347006 intron CG32206 - chr3L_23_19345001 chr3L_19345001 CanS-SH 1815 chr3L 19398863 19398924 chr3L 19403655 19403716 F-element 18 4792 5.5 4.5 5.0 3.0 4853 chr3L 19398863 intron CG32206 - chr3L 19401290 intron CG32206 - chr3L 19403716 intron CG32206 - chr3L_18_19400001 chr3L_19400001 CanS-SH 1816 chr3L 19417747 19417779 chr3L 19417902 19417934 4 155 14.5 8.0 11.2 0.3 187 chr3L 19417747 intergenic not near genes chr3L 19417840 intergenic not near genes chr3L 19417934 intergenic not near genes chr3L_4_19415001 chr3L_19415001 CanS-SH 1817 chr3L 19426685 19426717 chr3L 19426838 19426870 10 153 15.0 7.5 11.2 0.8 185 chr3L 19426685 intergenic not near genes chr3L 19426778 intergenic not near genes chr3L 19426870 intergenic not near genes chr3L_10_19425001 chr3L_19425001 CanS-SH 1818 chr3L 19434753 19434786 chr3L 19434907 19434940 7 154 1.0 12.0 6.5 0.9 187 chr3L 19434753 intergenic not near genes chr3L 19434846 intergenic not near genes chr3L 19434940 intergenic not near genes chr3L_7_19430001 chr3L_19430001 CanS-SH 1819 chr3L 19439111 19439146 chr3L 19439265 19439300 5 154 11.5 7.5 9.5 0.5 189 chr3L 19439111 intergenic not near genes chr3L 19439206 intergenic not near genes chr3L 19439300 intergenic not near genes chr3L_5_19435001 chr3L_19435001 CanS-SH 1820 chr3L 19463888 19463890 chr3L 19467764 19467766 INE-1 5 3876 50.5 38.5 44.5 0.1 3878 chr3L 19463888 intergenic CG14095 - chr3L 19465827 intergenic not near genes chr3L 19467766 exon CG32214 + chr3L_5_19465001 chr3L_19465001 CanS-SH 1821 chr3L 19488481 19488491 chr3L 19488638 19488648 5 157 5.5 18.0 11.8 0.4 167 chr3L 19488481 intergenic pncr009:3L -,CG32212 + chr3L 19488564 intergenic pncr009:3L -,CG32212 + chr3L 19488648 intergenic pncr009:3L -,CG32212 + chr3L_5_19485001 chr3L_19485001 CanS-SH 1822 chr3L 19562346 19562425 chr3L 19562506 19562585 20 160 14.5 7.0 10.8 1.7 239 chr3L 19562346 intergenic not near genes chr3L 19562466 intergenic not near genes chr3L 19562585 intergenic not near genes chr3L_20_19560001 chr3L_19560001 CanS-SH 1823 chr3L 19576303 19576379 chr3L 19576455 19576531 10 152 9.5 6.5 8.0 1.1 228 chr3L 19576303 intron Shal - chr3L 19576417 intron Shal - chr3L 19576531 intron Shal - chr3L_10_19575001 chr3L_19575001 CanS-SH 1824 chr3L 19605485 19605498 chr3L 19605648 19605661 5 163 18.0 13.0 15.5 0.3 176 chr3L 19605485 intron lush - chr3L 19605573 intron lush - chr3L 19605661 intron lush - chr3L_5_19605001 chr3L_19605001 CanS-SH 1825 chr3L 19657560 19657607 chr3L 19657714 19657761 17 154 6.5 5.5 6.0 2.4 201 chr3L 19657560 intron tey - chr3L 19657660 intron tey - chr3L 19657761 intron tey - chr3L_17_19655001 chr3L_19655001 CanS-SH 1826 chr3L 19661027 19661051 chr3L 19661185 19661208 10 158 9.0 17.0 13.0 0.7 181 chr3L 19661027 intron tey - chr3L 19661118 intron tey - chr3L 19661208 intron tey - chr3L_10_19660001 chr3L_19660001 CanS-SH 1827 chr3L 19792305 19792359 chr3L 19792475 19792529 19 170 9.0 18.5 13.8 1.3 224 chr3L 19792305 intron,intron CG42637 -,Gyc76C - chr3L 19792417 intron,intron CG42637 -,Gyc76C - chr3L 19792529 intron,intron CG42637 -,Gyc76C - chr3L_19_19790001 chr3L_19790001 CanS-SH 1828 chr3L 19820223 19820316 chr3L 19827847 19827940 412 17 7624 4.5 3.5 4.0 3.4 7717 chr3L 19820223 intron Deaf1 + chr3L 19824082 intron Deaf1 + chr3L 19827940 intron Deaf1 + chr3L_17_19820001 chr3L_19820001 CanS-SH 1829 chr3L 19848454 19848488 chr3L 19857720 19857754 roo 18 9266 11.0 15.0 13.0 1.3 9300 chr3L 19848454 intron Papss + chr3L 19853104 intron Papss + chr3L 19857754 intron Papss + chr3L_18_19850001 chr3L_19850001 CanS-SH 1830 chr3L 19861760 19861798 chr3L 19863623 19863661 S-element 17 1863 21.5 8.0 14.8 1.1 1901 chr3L 19861760 5` UTR CR45433 + chr3L 19862710 intergenic not near genes chr3L 19863661 intergenic not near genes chr3L_17_19860001 chr3L_19860001 CanS-SH 1831 chr3L 19872547 19872578 chr3L 19872766 19872797 5 219 10.5 8.5 9.5 0.5 250 chr3L 19872547 intron CG8334 + chr3L 19872672 intron CG8334 + chr3L 19872797 intron CG8334 + chr3L_5_19870001 chr3L_19870001 CanS-SH 1832 chr3L 19933465 19933559 chr3L 19934362 19934456 16 897 6.5 5.0 5.8 2.4 991 chr3L 19933465 intergenic CR45678 + chr3L 19933960 5` UTR CR45678 + chr3L 19934456 intergenic CR45678 + chr3L_16_19930001 chr3L_19930001 CanS-SH 1833 chr3L 19981143 19981223 chr3L 19981298 19981378 25 155 8.5 9.0 8.8 2.6 235 chr3L 19981143 intergenic not near genes chr3L 19981260 intergenic CG17732 + chr3L 19981378 intergenic CG17732 + chr3L_25_19980001 chr3L_19980001 CanS-SH 1834 chr3L 20097646 20097666 chr3L 20097838 20097858 8 192 17.5 9.5 13.5 0.6 212 chr3L 20097646 intergenic CG14186 - chr3L 20097752 intergenic CG14186 - chr3L 20097858 intergenic CG14186 - chr3L_8_20095001 chr3L_20095001 CanS-SH 1835 chr3L 20113594 20113632 chr3L 20122926 20122964 roo 11 9332 16.5 8.0 12.2 0.8 9370 chr3L 20113594 intergenic not near genes chr3L 20118279 intergenic not near genes chr3L 20122964 intergenic not near genes chr3L_11_20115001 chr3L_20115001 CanS-SH 1836 chr3L 20148223 20148297 chr3L 20148388 20148462 13 165 7.5 9.0 8.2 1.4 239 chr3L 20148223 intergenic not near genes chr3L 20148342 intergenic not near genes chr3L 20148462 intergenic not near genes chr3L_13_20145001 chr3L_20145001 CanS-SH 1837 chr3L 20156101 20156138 chr3L 20156298 20156335 13 197 16.0 4.0 10.0 1.2 234 chr3L 20156101 intron CG42674 - chr3L 20156218 intron CG42674 - chr3L 20156335 intron CG42674 - chr3L_13_20155001 chr3L_20155001 CanS-SH 1838 chr3L 20212545 20212576 chr3L 20218197 20218227 mdg3 13 5652 23.0 11.0 17.0 0.7 5682 chr3L 20212545 intergenic CG7017 - chr3L 20215386 intergenic not near genes chr3L 20218227 intergenic CG6933 - chr3L_13_20215001 chr3L_20215001 CanS-SH 1839 chr3L 20257268 20257308 chr3L 20258463 20258503 pogo 13 1195 12.5 9.5 11.0 1.1 1235 chr3L 20257268 intron rdgC + chr3L 20257886 intron rdgC + chr3L 20258503 intron rdgC + chr3L_13_20255001 chr3L_20255001 CanS-SH 1840 chr3L 20283323 20283400 chr3L 20283478 20283555 13 155 8.0 5.5 6.8 1.7 232 chr3L 20283323 intron gogo - chr3L 20283439 intron gogo - chr3L 20283555 intron gogo - chr3L_13_20280001 chr3L_20280001 CanS-SH 1841 chr3L 20386872 20386932 chr3L 20387049 20387109 20 177 13.0 5.0 9.0 2.0 237 chr3L 20386872 intron fbl + chr3L 20386990 intron fbl + chr3L 20387109 intron fbl + chr3L_20_20385001 chr3L_20385001 CanS-SH 1842 chr3L 20462513 20462597 chr3L 20462669 20462753 28 156 5.5 10.0 7.8 3.2 240 chr3L 20462513 intron atk - chr3L 20462633 intron atk - chr3L 20462753 intron atk - chr3L_28_20460001 chr3L_20460001 CanS-SH 1843 chr3L 20476697 20476729 chr3L 20484371 20484403 springer 8 7674 17.5 12.5 15.0 0.5 7706 chr3L 20476697 3` UTR isoQC + chr3L 20480550 intergenic not near genes chr3L 20484403 3` UTR ZnT77C - chr3L_8_20480001 chr3L_20480001 CanS-SH 1844 chr3L 20487603 20487633 chr3L 20488129 20488159 INE-1 8 526 21.0 7.0 14.0 0.5 556 chr3L 20487603 intron ZnT77C - chr3L 20487881 intron ZnT77C - chr3L 20488159 exon ZnT77C - chr3L_8_20485001 chr3L_20485001 CanS-SH 1845 chr3L 20525228 20525228 chr3L 24821492 24821494 7 4296265 29.0 25.0 27.0 0.2 4296266 chr3L 20525228 intron CG4825 - chr3L 22673361 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_7_22670001 chr3L_22670001 CanS-SH 1846 chr3L 20525229 20525229 chr3L 24821492 24821494 7 4296264 29.0 25.0 27.0 0.2 4296265 chr3L 20525229 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_7_22670001 chr3L_22670001 CanS-SH 1847 chr3L 20590008 20590041 chr3L 20590622 20590655 412 11 614 10.0 7.5 8.8 1.1 647 chr3L 20590008 intergenic not near genes chr3L 20590332 intergenic not near genes chr3L 20590655 intergenic not near genes chr3L_11_20590001 chr3L_20590001 CanS-SH 1848 chr3L 20752050 20752062 chr3L 20752203 20752215 4 153 22.0 4.0 13.0 0.3 165 chr3L 20752050 intergenic not near genes chr3L 20752132 intergenic not near genes chr3L 20752215 intergenic not near genes chr3L_4_20750001 chr3L_20750001 CanS-SH 1849 chr3L 20858007 20858075 chr3L 20858181 20858249 25 174 10.0 9.5 9.8 2.3 242 chr3L 20858007 intron CG32432 - chr3L 20858128 intron CG32432 - chr3L 20858249 intron CG32432 - chr3L_25_20855001 chr3L_20855001 CanS-SH 1850 chr3L 20902634 20902714 chr3L 20902791 20902871 20 157 8.0 9.0 8.5 2.1 237 chr3L 20902634 intergenic CR45383 + chr3L 20902752 intergenic CR45383 + chr3L 20902871 intergenic CR45383 + chr3L_20_20900001 chr3L_20900001 CanS-SH 1851 chr3L 20919361 20919452 chr3L 20921214 20921305 19 1853 47.0 59.5 53.2 0.4 1944 chr3L 20919361 intergenic not near genes chr3L 20920333 intergenic CR45734 + chr3L 20921305 3` UTR CR43929 - chr3L_19_20920001 chr3L_20920001 CanS-SH 1852 chr3L 21014853 21014888 chr3L 21023409 21023444 Tirant 6 8556 12.5 10.0 11.2 0.5 8591 chr3L 21014853 intron skd - chr3L 21019148 intron skd - chr3L 21023444 intron skd - chr3L_6_21015001 chr3L_21015001 CanS-SH 1853 chr3L 21067887 21067964 chr3L 21068042 21068119 29 155 12.0 5.0 8.5 3.1 232 chr3L 21067887 intron siz + chr3L 21068003 intron siz + chr3L 21068119 intron siz + chr3L_29_21065001 chr3L_21065001 CanS-SH 1854 chr3L 21151801 21151838 chr3L 21156960 21156997 flea 17 5159 12.5 5.5 9.0 1.7 5196 chr3L 21151801 intron Ac78C - chr3L 21154399 intron Ac78C - chr3L 21156997 intron Ac78C - chr3L_17_21150001 chr3L_21150001 CanS-SH 1855 chr3L 21172782 21172839 chr3L 21172960 21173017 24 178 12.5 10.0 11.2 2.0 235 chr3L 21172782 intergenic chb +,asparagine-synthetase + chr3L 21172900 5` UTR chb + chr3L 21173017 5` UTR chb + chr3L_24_21170001 chr3L_21170001 CanS-SH 1856 chr3L 21243680 21243692 chr3L 21251318 21251330 412 6 7638 0.0 10.5 5.2 1.0 7650 chr3L 21243680 intron Eip78C + chr3L 21247505 intron Eip78C + chr3L 21251330 intron Eip78C + chr3L_6_21245001 chr3L_21245001 CanS-SH 1857 chr3L 21306084 21306124 chr3L 21315318 21315358 roo 13 9234 13.5 10.5 12.0 1.0 9274 chr3L 21306084 3` UTR CG7632 + chr3L 21310721 intron Pc - chr3L 21315358 3` UTR Pc - chr3L_13_21310001 chr3L_21310001 CanS-SH 1858 chr3L 21319462 21319540 chr3L 21319627 21319705 35 165 9.5 10.0 9.8 3.2 243 chr3L 21319462 5` UTR Rab26 + chr3L 21319584 5` UTR Rab26 + chr3L 21319705 5` UTR Rab26 + chr3L_35_21315001 chr3L_21315001 CanS-SH 1859 chr3L 21372656 21372705 chr3L 21379239 21379287 McClintock 7 6583 14.0 8.0 11.0 0.6 6631 chr3L 21372656 intergenic not near genes chr3L 21375972 intergenic not near genes chr3L 21379287 intergenic not near genes chr3L_7_21375001 chr3L_21375001 CanS-SH 1860 chr3L 21501125 21501144 chr3L 21501294 21501313 1360 8 169 12.0 13.0 12.5 0.6 188 chr3L 21501125 intron Glg1 - chr3L 21501219 intron Glg1 - chr3L 21501313 intron Glg1 - chr3L_8_21500001 chr3L_21500001 CanS-SH 1861 chr3L 21639136 21639211 chr3L 21639290 21639365 18 154 12.0 7.5 9.8 1.7 229 chr3L 21639136 intergenic CG32444 +,CG32445 + chr3L 21639250 intergenic CG32445 +,CG32444 + chr3L 21639365 5` UTR CG32445 + chr3L_18_21635001 chr3L_21635001 CanS-SH 1862 chr3L 21656928 21657005 chr3L 21657096 21657173 32 168 10.5 6.5 8.5 3.4 245 chr3L 21656928 intron CG43980 + chr3L 21657050 intron CG43980 + chr3L 21657173 intron CG43980 + chr3L_32_21655001 chr3L_21655001 CanS-SH 1863 chr3L 21709226 21709240 chr3L 21709647 21709661 4 421 21.0 14.5 17.8 0.2 435 chr3L 21709226 intergenic not near genes chr3L 21709444 intergenic not near genes chr3L 21709661 intergenic not near genes chr3L_4_21705001 chr3L_21705001 CanS-SH 1864 chr3L 21749257 21749291 chr3L 21754492 21754526 Doc 10 5235 14.0 10.5 12.2 0.8 5269 chr3L 21749257 intron Syn1 - chr3L 21751892 intron Syn1 - chr3L 21754526 intron Syn1 - chr3L_10_21750001 chr3L_21750001 CanS-SH 1865 chr3L 21768987 21769070 chr3L 21769149 21769232 28 162 9.0 8.5 8.8 2.9 245 chr3L 21768987 intron,intron Syn1 -,CG42689 + chr3L 21769110 intron,intron Syn1 -,CG42689 + chr3L 21769232 intron,intron Syn1 -,CG42689 + chr3L_28_21765001 chr3L_21765001 CanS-SH 1866 chr3L 21769969 21770027 chr3L 21770131 21770188 16 162 9.5 11.0 10.2 1.4 219 chr3L 21769969 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770078 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770188 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L_16_21770001 chr3L_21770001 CanS-SH 1867 chr3L 21824382 21824453 chr3L 21824545 21824616 25 163 7.5 8.0 7.8 2.8 234 chr3L 21824382 3` UTR CG7407 + chr3L 21824499 3` UTR CG7407 + chr3L 21824616 intergenic CG7407 +,CG7414 + chr3L_25_21820001 chr3L_21820001 CanS-SH 1868 chr3L 21828263 21828300 chr3L 21828541 21828578 17 278 10.0 10.5 10.2 1.5 315 chr3L 21828263 5` UTR CG32448 - chr3L 21828420 intron CG32448 - chr3L 21828578 intergenic CG32448 - chr3L_17_21825001 chr3L_21825001 CanS-SH 1869 chr3L 21836664 21836744 chr3L 21836825 21836905 29 161 10.0 12.0 11.0 2.4 241 chr3L 21836664 3` UTR,3` UTR Nopp140 +,P5CDh1 - chr3L 21836784 3` UTR P5CDh1 - chr3L 21836905 3` UTR P5CDh1 - chr3L_29_21835001 chr3L_21835001 CanS-SH 1870 chr3L 21845147 21845174 chr3L 21845362 21845390 10 216 0.5 9.5 5.0 1.7 243 chr3L 21845147 5` UTR mub + chr3L 21845268 intron mub + chr3L 21845390 intron mub + chr3L_10_21845001 chr3L_21845001 CanS-SH 1871 chr3L 21868527 21868589 chr3L 21868692 21868754 11 165 7.5 15.5 11.5 0.9 227 chr3L 21868527 intron mub + chr3L 21868640 intron mub + chr3L 21868754 intron mub + chr3L_11_21865001 chr3L_21865001 CanS-SH 1872 chr3L 21872373 21872446 chr3L 21872527 21872600 5 154 10.5 4.5 7.5 0.6 227 chr3L 21872373 intron mub + chr3L 21872486 intron mub + chr3L 21872600 intron mub + chr3L_5_21870001 chr3L_21870001 CanS-SH 1873 chr3L 21882573 21882647 chr3L 21883825 21883899 20 1252 18.0 13.5 15.8 1.2 1326 chr3L 21882573 intron mub + chr3L 21883236 intron mub + chr3L 21883899 intron mub + chr3L_20_21880001 chr3L_21880001 CanS-SH 1874 chr3L 21881665 21881703 chr3L 21885019 21885057 14 3354 54.0 41.5 47.8 0.3 3392 chr3L 21881665 intron mub + chr3L 21883361 intron mub + chr3L 21885057 intron,intron mub +,CR43878 - chr3L_14_21880001 chr3L_21880001 CanS-SH 1875 chr3L 21889961 21889995 chr3L 21890533 21890567 12 572 12.0 12.0 12.0 0.9 606 chr3L 21889961 intron mub + chr3L 21890264 intron mub + chr3L 21890567 intron mub + chr3L_12_21890001 chr3L_21890001 CanS-SH 1876 chr3L 21900964 21901023 chr3L 21901132 21901191 19 168 14.0 10.5 12.2 1.4 227 chr3L 21900964 intron mub + chr3L 21901078 intron mub + chr3L 21901191 intron mub + chr3L_19_21900001 chr3L_21900001 CanS-SH 1877 chr3L 22034541 22034579 chr3L 22034718 22034756 16 177 14.5 9.0 11.8 1.2 215 chr3L 22034541 intergenic Oct-TyrR + chr3L 22034648 intergenic Oct-TyrR + chr3L 22034756 intergenic Oct-TyrR + chr3L_16_22030001 chr3L_22030001 CanS-SH 1878 chr3L 22099626 22099643 chr3L 22105887 22105904 3S18 7 6261 18.0 14.0 16.0 0.4 6278 chr3L 22099626 intergenic not near genes chr3L 22102765 intergenic not near genes chr3L 22105904 intergenic not near genes chr3L_7_22100001 chr3L_22100001 CanS-SH 1879 chr3L 22122116 22122137 chr3L 22122534 22122556 7 419 16.0 7.0 11.5 0.6 440 chr3L 22122116 5` UTR CR45236 + chr3L 22122336 intergenic CR45236 +,CR45235 + chr3L 22122556 intergenic CR45235 +,CR45236 + chr3L_7_22120001 chr3L_22120001 CanS-SH 1880 chr3L 22130425 22130514 chr3L 22130646 22130735 15 221 7.0 7.0 7.0 1.9 310 chr3L 22130425 intergenic not near genes chr3L 22130580 intergenic not near genes chr3L 22130735 intergenic not near genes chr3L_15_22130001 chr3L_22130001 CanS-SH 1881 chr3L 22241224 22241306 chr3L 22241381 22241463 31 157 7.0 7.0 7.0 3.9 239 chr3L 22241224 intron olf413 + chr3L 22241344 intron olf413 + chr3L 22241463 intron olf413 + chr3L_31_22240001 chr3L_22240001 CanS-SH 1882 chr3L 22250931 22251001 chr3L 22251101 22251170 28 170 9.0 2.5 5.8 4.1 239 chr3L 22250931 intergenic not near genes chr3L 22251050 intergenic not near genes chr3L 22251170 intergenic not near genes chr3L_28_22250001 chr3L_22250001 CanS-SH 1883 chr3L 22331198 22331214 chr3L 22331352 22331368 10 154 16.0 13.5 14.8 0.6 170 chr3L 22331198 intron Ten-m - chr3L 22331283 intron Ten-m - chr3L 22331368 intron Ten-m - chr3L_10_22330001 chr3L_22330001 CanS-SH 1884 chr3L 22335427 22335463 chr3L 22335628 22335664 16 201 20.0 10.0 15.0 1.0 237 chr3L 22335427 intron Ten-m - chr3L 22335546 intron Ten-m - chr3L 22335664 intron Ten-m - chr3L_16_22335001 chr3L_22335001 CanS-SH 1885 chr3L 22428216 22428286 chr3L 22428375 22428445 18 159 10.0 9.0 9.5 1.7 229 chr3L 22428216 intergenic not near genes chr3L 22428330 intergenic not near genes chr3L 22428445 intergenic not near genes chr3L_18_22425001 chr3L_22425001 CanS-SH 1886 chr3L 22492400 22492479 chr3L 22492563 22492642 25 163 11.0 12.0 11.5 2.0 242 chr3L 22492400 intergenic not near genes chr3L 22492521 intergenic not near genes chr3L 22492642 intergenic not near genes chr3L_25_22490001 chr3L_22490001 CanS-SH 1887 chr3L 22502031 22502127 chr3L 22502339 22502434 16 308 6.0 7.0 6.5 2.1 403 chr3L 22502031 exon CG43312 + chr3L 22502232 exon CG43312 + chr3L 22502434 intergenic CG43312 + chr3L_16_22500001 chr3L_22500001 CanS-SH 1888 chr3L 22531867 22531897 chr3L 22532254 22532284 11 387 19.5 5.0 12.2 0.8 417 chr3L 22531867 intergenic not near genes chr3L 22532076 intergenic not near genes chr3L 22532284 intergenic not near genes chr3L_11_22530001 chr3L_22530001 CanS-SH 1889 chr3L 22555708 22555742 chr3L 22563252 22563287 blood 10 7545 14.5 3.5 9.0 1.0 7579 chr3L 22555708 intergenic not near genes chr3L 22559498 intergenic not near genes chr3L 22563287 intergenic not near genes chr3L_10_22555001 chr3L_22555001 CanS-SH 1890 chr3L 22570360 22570404 chr3L 22570579 22570623 16 219 13.5 8.0 10.8 1.4 263 chr3L 22570360 intergenic not near genes chr3L 22570492 intergenic not near genes chr3L 22570623 intergenic not near genes chr3L_16_22570001 chr3L_22570001 CanS-SH 1891 chr3L 22577562 22577594 chr3L 22582425 22582457 Doc 13 4863 13.5 7.5 10.5 1.1 4895 chr3L 22577562 intergenic not near genes chr3L 22580010 intergenic not near genes chr3L 22582457 3` UTR CG14459 - chr3L_13_22580001 chr3L_22580001 CanS-SH 1892 chr3L 22617120 22617210 chr3L 22624647 22624737 blood 11 7527 3.5 7.5 5.5 1.7 7617 chr3L 22617120 intron CG14459 - chr3L 22620928 intron CG14459 - chr3L 22624737 intron CG14459 - chr3L_11_22620001 chr3L_22620001 CanS-SH 1893 chr3L 22660013 22660068 chr3L 22660196 22660251 18 183 11.5 2.5 7.0 2.2 238 chr3L 22660013 intergenic not near genes chr3L 22660132 intergenic not near genes chr3L 22660251 intergenic not near genes chr3L_18_22660001 chr3L_22660001 CanS-SH 1894 chr3L 22669907 22669978 chr3L 22670075 22670145 13 168 10.5 10.0 10.2 1.2 238 chr3L 22669907 intergenic CG14457 +,CR43270 - chr3L 22670026 5` UTR CG14457 + chr3L 22670145 intron CG14457 + chr3L_13_22670001 chr3L_22670001 CanS-SH 1895 chr3L 22682150 22682210 chr3L 22682325 22682385 10 175 4.5 9.0 6.8 1.3 235 chr3L 22682150 intergenic not near genes chr3L 22682268 intergenic not near genes chr3L 22682385 intergenic not near genes chr3L_10_22680001 chr3L_22680001 CanS-SH 1896 chr3L 22726168 22726439 chr3L 22726327 22726600 48 160 7.0 7.0 7.0 6.0 432 chr3L 22726168 3` UTR mael + chr3L 22726384 3` UTR CG14450 - chr3L 22726600 3` UTR CG14450 - chr3L_48_22725001 chr3L_22725001 CanS-SH 1897 chr3L 22752441 22752476 chr3L 22752823 22752858 10 382 6.0 5.5 5.8 1.5 417 chr3L 22752441 intron SPoCk + chr3L 22752650 intron SPoCk + chr3L 22752858 intron SPoCk + chr3L_10_22750001 chr3L_22750001 CanS-SH 1898 chr3L 22761326 22761361 chr3L 22766835 22766870 Ivk 15 5509 19.5 3.5 11.5 1.2 5544 chr3L 22761326 intron SPoCk + chr3L 22764098 intron SPoCk + chr3L 22766870 intron SPoCk + chr3L_15_22760001 chr3L_22760001 CanS-SH 1899 chr3L 22771762 22771842 chr3L 22771920 22772000 31 158 10.0 11.5 10.8 2.6 238 chr3L 22771762 intron SPoCk + chr3L 22771881 intron SPoCk + chr3L 22772000 intron SPoCk + chr3L_31_22770001 chr3L_22770001 CanS-SH 1900 chr3L 22849382 22849426 chr3L 22849542 22849586 21 160 14.0 16.5 15.2 1.3 204 chr3L 22849382 intergenic not near genes chr3L 22849484 intergenic not near genes chr3L 22849586 intergenic not near genes chr3L_21_22845001 chr3L_22845001 CanS-SH 1901 chr3L 22865918 22865960 chr3L 22867126 22867169 Doc 8 1208 17.0 10.5 13.8 0.5 1251 chr3L 22865918 exon CG33170 + chr3L 22866544 intron CG33170 + chr3L 22867169 intron CG33170 + chr3L_8_22865001 chr3L_22865001 CanS-SH 1902 chr3L 20525228 20525230 chr3L 22908067 22908067 8 2382837 28.5 43.5 36.0 0.2 2382839 chr3L 20525228 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_8_21715001 chr3L_21715001 CanS-SH 1903 chr3L 22916310 22916347 chr3L 22916475 22916512 21 165 12.0 11.5 11.8 1.6 202 chr3L 22916310 intron CG12768 + chr3L 22916411 intron CG12768 + chr3L 22916512 intron CG12768 + chr3L_21_22915001 chr3L_22915001 CanS-SH 1904 chr3L 22924897 22924974 chr3L 22925050 22925127 20 153 4.5 7.5 6.0 2.9 230 chr3L 22924897 intergenic not near genes chr3L 22925012 intergenic not near genes chr3L 22925127 intergenic not near genes chr3L_20_22925001 chr3L_22925001 CanS-SH 1905 chr3L 22961016 22961093 chr3L 22961175 22961252 24 159 9.0 10.0 9.5 2.3 236 chr3L 22961016 5` UTR CR45758 + chr3L 22961134 5` UTR CR45758 + chr3L 22961252 5` UTR CR45758 + chr3L_24_22960001 chr3L_22960001 CanS-SH 1906 chr3L 22989802 22989842 chr3L 22996851 22996891 297 12 7049 15.5 11.5 13.5 0.8 7089 chr3L 22989802 intergenic not near genes chr3L 22993346 intergenic not near genes chr3L 22996891 intergenic not near genes chr3L_12_22990001 chr3L_22990001 CanS-SH 1907 chr3L 23004841 23004865 chr3L 23005241 23005265 8 400 16.5 7.0 11.8 0.6 424 chr3L 23004841 intron nrm + chr3L 23005053 intron nrm + chr3L 23005265 intron nrm + chr3L_8_23005001 chr3L_23005001 CanS-SH 1908 chr3L 23165875 23165887 chr3L 23173394 23173406 Quasimodo 5 7519 11.5 10.5 11.0 0.4 7531 chr3L 23165875 intergenic not near genes chr3L 23169640 intergenic not near genes chr3L 23173406 intergenic not near genes chr3L_5_23165001 chr3L_23165001 CanS-SH 1909 chr3L 23182200 23182250 chr3L 23182389 23182439 18 189 16.5 5.5 11.0 1.5 239 chr3L 23182200 intron CG34031 + chr3L 23182320 intron CG34031 + chr3L 23182439 intron CG34031 + chr3L_18_23180001 chr3L_23180001 CanS-SH 1910 chr3L 23205386 23205420 chr3L 23205691 23205725 19 305 18.0 7.0 12.5 1.4 339 chr3L 23205386 intergenic not near genes chr3L 23205556 intergenic not near genes chr3L 23205725 intergenic not near genes chr3L_19_23205001 chr3L_23205001 CanS-SH 1911 chr3L 23445402 23445419 chr3L 23445601 23445618 Idefix 7 199 12.5 7.0 9.8 0.6 216 chr3L 23445402 intergenic not near genes chr3L 23445510 intergenic not near genes chr3L 23445618 intergenic not near genes chr3L_7_23445001 chr3L_23445001 CanS-SH 1912 chr3L 23570343 23570378 chr3L 23571032 23571067 mariner2 13 689 12.5 5.5 9.0 1.3 724 chr3L 23570343 intron AGO3 + chr3L 23570705 intron AGO3 + chr3L 23571067 intron AGO3 + chr3L_13_23570001 chr3L_23570001 CanS-SH 1913 chr3L 23665460 23665504 chr3L 23665625 23665669 gypsy8 19 165 36.0 33.5 34.8 0.5 209 chr3L 23665460 intron AGO3 + chr3L 23665564 intron AGO3 + chr3L 23665669 intron AGO3 + chr3L_19_23665001 chr3L_23665001 CanS-SH 1914 chr3L 23703987 23704028 chr3L 23704147 23704188 14 160 10.5 17.0 13.8 0.9 201 chr3L 23703987 intergenic not near genes chr3L 23704088 intergenic not near genes chr3L 23704188 intergenic not near genes chr3L_14_23700001 chr3L_23700001 CanS-SH 1915 chr3L 23847994 23848070 chr3L 23848151 23848227 4 157 5.0 3.5 4.2 0.8 233 chr3L 23847994 intron CG40470 - chr3L 23848110 intron CG40470 - chr3L 23848227 intron CG40470 - chr3L_4_23845001 chr3L_23845001 CanS-SH 1916 chr3L 23848778 23848808 chr3L 23849677 23849707 R1A1-element 7 899 3.5 7.5 5.5 1.1 929 chr3L 23848778 intron CG40470 - chr3L 23849242 intron CG40470 - chr3L 23849707 intron CG40470 - chr3L_7_23845001 chr3L_23845001 CanS-SH 1917 chr3L 23854224 23854317 chr3L 23854397 23854490 10 173 4.0 5.0 4.5 1.8 266 chr3L 23854224 intron CG40470 - chr3L 23854357 intron CG40470 - chr3L 23854490 intron CG40470 - chr3L_10_23850001 chr3L_23850001 CanS-SH 1918 chr3L 23940799 23940874 chr3L 23940954 23941029 17 155 5.0 4.5 4.8 2.9 230 chr3L 23940799 intron CG40470 - chr3L 23940914 intron CG40470 - chr3L 23941029 intron CG40470 - chr3L_17_23940001 chr3L_23940001 CanS-SH 1919 chr3L 24009600 24009643 chr3L 24009857 24009900 17 257 14.5 5.5 10.0 1.5 300 chr3L 24009600 intergenic CR40053 - chr3L 24009750 intergenic CR40053 - chr3L 24009900 intergenic CR40053 - chr3L_17_24005001 chr3L_24005001 CanS-SH 1920 chr3L 24012344 24012376 chr3L 24020760 24020792 roo 10 8416 13.5 9.0 11.2 0.8 8448 chr3L 24012344 intergenic not near genes chr3L 24016568 intergenic not near genes chr3L 24020792 intergenic not near genes chr3L_10_24015001 chr3L_24015001 CanS-SH 1921 chr3L 24021225 24021247 chr3L 24022457 24022479 1360 6 1232 18.0 6.5 12.2 0.5 1254 chr3L 24021225 intergenic not near genes chr3L 24021852 intergenic not near genes chr3L 24022479 intergenic not near genes chr3L_6_24020001 chr3L_24020001 CanS-SH 1922 chr3L 24084463 24084501 chr3L 24084626 24084664 11 163 6.0 7.5 6.8 1.4 201 chr3L 24084463 intron Snap25 + chr3L 24084564 intron Snap25 + chr3L 24084664 intron Snap25 + chr3L_11_24080001 chr3L_24080001 CanS-SH 1923 chr3L 24168725 24168758 chr3L 24176128 24176161 ZAM 6 7403 5.5 9.5 7.5 0.7 7436 chr3L 24168725 intron Snap25 + chr3L 24172443 intron Snap25 + chr3L 24176161 intron Snap25 + chr3L_6_24170001 chr3L_24170001 CanS-SH 1924 chr3L 24204220 24204223 chr3L 24226233 24226236 invader2 4 22013 28.5 15.5 22.0 0.2 22016 chr3L 24204220 intron Snap25 + chr3L 24215228 intron Snap25 + chr3L 24226236 intron Snap25 + chr3L_4_24215001 chr3L_24215001 CanS-SH 1925 chr3L 24301220 24301255 chr3L 24301630 24301665 6 410 8.0 0.5 4.2 1.2 445 chr3L 24301220 intergenic not near genes chr3L 24301442 intergenic not near genes chr3L 24301665 intergenic not near genes chr3L_6_24300001 chr3L_24300001 CanS-SH 1926 chr3L 24312068 24312109 chr3L 24312272 24312313 16 204 12.0 8.0 10.0 1.5 245 chr3L 24312068 intergenic not near genes chr3L 24312190 intergenic not near genes chr3L 24312313 intergenic not near genes chr3L_16_24310001 chr3L_24310001 CanS-SH 1927 chr3L 24324230 24324316 chr3L 24324400 24324486 12 170 3.5 6.5 5.0 2.0 256 chr3L 24324230 intergenic not near genes chr3L 24324358 intergenic not near genes chr3L 24324486 intergenic nvd + chr3L_12_24320001 chr3L_24320001 CanS-SH 1928 chr3L 24791837 24791858 chr3L 24796691 24796712 Doc 7 4854 12.0 6.0 9.0 0.7 4875 chr3L 24791837 intergenic not near genes chr3L 24794274 intergenic not near genes chr3L 24796712 intergenic not near genes chr3L_7_24790001 chr3L_24790001 CanS-SH 1929 chr3L 20525228 20525230 chr3L 24821492 24821492 9 4296263 28.5 25.0 26.8 0.3 4296264 chr3L 20525228 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821492 intergenic not near genes chr3L_9_22670001 chr3L_22670001 CanS-SH 1930 chr3L 20525227 20525229 chr3L 24821494 24821494 5 4296265 29.0 25.0 27.0 0.2 4296267 chr3L 20525227 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_5_22670001 chr3L_22670001 CanS-SH 1931 chr3L 25061719 25061768 chr3L 25061887 25061936 8 168 8.0 11.0 9.5 0.8 217 chr3L 25061719 intergenic not near genes chr3L 25061828 intergenic not near genes chr3L 25061936 intergenic not near genes chr3L_8_25060001 chr3L_25060001 CanS-SH 1932 chr3L 25331562 25331625 chr3L 25331728 25331791 8 166 10.5 3.0 6.8 1.0 229 chr3L 25331562 intergenic not near genes chr3L 25331676 intergenic not near genes chr3L 25331791 intergenic not near genes chr3L_8_25330001 chr3L_25330001 CanS-SH 1933 chr3L 25463960 25464035 chr3L 25464122 25464197 18 162 8.5 5.0 6.8 2.3 237 chr3L 25463960 intergenic not near genes chr3L 25464078 intergenic not near genes chr3L 25464197 intergenic not near genes chr3L_18_25460001 chr3L_25460001 CanS-SH 1934 chr3L 25628439 25628460 chr3L 25633285 25633306 F-element 10 4846 21.5 6.5 14.0 0.7 4867 chr3L 25628439 intron CG41343 - chr3L 25630872 intron CG41343 - chr3L 25633306 intron CG41343 - chr3L_10_25630001 chr3L_25630001 CanS-SH 1935 chr3L 25842412 25842428 chr3L 25842573 25842589 11 161 6.5 7.5 7.0 1.4 177 chr3L 25842412 intron CG40178 - chr3L 25842500 intron CG40178 - chr3L 25842589 intron CG40178 - chr3L_11_25840001 chr3L_25840001 CanS-SH 1936 chr3L 26009357 26009390 chr3L 26009523 26009556 13 166 15.0 7.0 11.0 1.1 199 chr3L 26009357 intron CG40178 - chr3L 26009456 intron CG40178 - chr3L 26009556 intron CG40178 - chr3L_13_26005001 chr3L_26005001 CanS-SH 1937 chr3L 26376775 26376813 chr3L 26377893 26377931 16 1118 29.5 31.0 30.2 0.5 1156 chr3L 26376775 intergenic not near genes chr3L 26377353 intergenic not near genes chr3L 26377931 intergenic not near genes chr3L_16_26375001 chr3L_26375001 CanS-SH 1938 chr3L 26704466 26704501 chr3L 26709846 26709881 Transpac 5 5380 8.0 6.5 7.2 0.6 5415 chr3L 26704466 intergenic not near genes chr3L 26707174 intergenic not near genes chr3L 26709881 intergenic not near genes chr3L_5_26705001 chr3L_26705001 CanS-SH 1939 chr3L 27356040 27356070 chr3L 27357314 27357344 1360 5 1274 12.5 0.0 6.2 0.7 1304 chr3L 27356040 intron Dbp80 + chr3L 27356692 intron Dbp80 + chr3L 27357344 intron Dbp80 + chr3L_5_27355001 chr3L_27355001 CanS-SH 1940 chr3L 27368818 27368843 chr3L 27369438 27369463 11 620 13.5 7.5 10.5 1.0 645 chr3L 27368818 intron Dbp80 + chr3L 27369140 intron Dbp80 + chr3L 27369463 intron Dbp80 + chr3L_11_27365001 chr3L_27365001 CanS-SH 1941 chr3L 27390460 27390697 chr3L 27390782 27390851 5 221 37.5 39.0 38.2 0.1 391 chr3L 27390460 intron Dbp80 + chr3L 27390656 intron Dbp80 + chr3L 27390851 intron Dbp80 + chr3L_5_27390001 chr3L_27390001 CanS-SH 1942 chr3L 27728748 27728811 chr3L 27728963 27729026 5 215 0.0 11.0 5.5 0.8 278 chr3L 27728748 intergenic not near genes chr3L 27728887 intergenic not near genes chr3L 27729026 intergenic not near genes chr3L_5_27725001 chr3L_27725001 CanS-SH 1943 chr3L 27980626 27980664 chr3L 27985499 27985537 Doc 20 4873 13.0 4.5 8.8 2.0 4911 chr3L 27980626 intron CG17514 - chr3L 27983082 intron CG17514 - chr3L 27985537 intron CG17514 - chr3L_20_27980001 chr3L_27980001 CanS-SH 1944 chr3R 1062322 1062362 chr3R 1062555 1062595 5 233 10.0 2.5 6.2 0.7 273 chr3R 1062322 intron CG15831 + chr3R 1062458 intron CG15831 + chr3R 1062595 intron CG15831 + chr3R_5_1060001 chr3R_1060001 CanS-SH 1945 chr3R 1443416 1443454 chr3R 1443571 1443609 6 155 3.0 9.5 6.2 0.8 193 chr3R 1443416 intron CG40155 + chr3R 1443512 intron CG40155 + chr3R 1443609 intron CG40155 + chr3R_6_1440001 chr3R_1440001 CanS-SH 1946 chr3R 1867040 1867066 chr3R 1954897 1954923 Doc3-element 5 87857 14.5 7.5 11.0 0.4 87883 chr3R 1867040 intron CG42623 + chr3R 1910982 intron CG42623 + chr3R 1954923 intergenic not near genes chr3R_5_1910001 chr3R_1910001 CanS-SH 1947 chr3R 1938989 1939058 chr3R 1939158 1939227 7 169 4.0 6.0 5.0 1.2 238 chr3R 1938989 intergenic not near genes chr3R 1939108 intergenic not near genes chr3R 1939227 intergenic not near genes chr3R_7_1935001 chr3R_1935001 CanS-SH 1948 chr3R 2534077 2534098 chr3R 2541721 2541742 7 7644 20.0 12.0 16.0 0.4 7665 chr3R 2534077 intergenic not near genes chr3R 2537910 intergenic not near genes chr3R 2541742 intergenic not near genes chr3R_7_2535001 chr3R_2535001 CanS-SH 1949 chr3R 3522571 3522603 chr3R 3525463 3525495 10 2892 34.0 31.5 32.8 0.3 2924 chr3R 3522571 intron Parp - chr3R 3524033 intron Parp - chr3R 3525495 intron Parp - chr3R_10_3520001 chr3R_3520001 CanS-SH 1950 chr3R 3522526 3522613 chr3R 3526050 3526137 18 3524 34.5 49.5 42.0 0.4 3611 chr3R 3522526 intron Parp - chr3R 3524332 intron Parp - chr3R 3526137 intron Parp - chr3R_18_3520001 chr3R_3520001 CanS-SH 1951 chr3R 3626772 3626815 chr3R 3626959 3627002 12 187 34.5 58.5 46.5 0.3 230 chr3R 3626772 intron Alg-2 + chr3R 3626887 intron Alg-2 + chr3R 3627002 exon Alg-2 + chr3R_12_3625001 chr3R_3625001 CanS-SH 1952 chr3R 3752683 3752746 chr3R 3752841 3752904 13 158 11.0 11.5 11.2 1.1 221 chr3R 3752683 intergenic CG41128 + chr3R 3752794 intergenic CG41128 + chr3R 3752904 intergenic not near genes chr3R_13_3750001 chr3R_3750001 CanS-SH 1953 chr3R 3848035 3848050 chr3R 3848211 3848226 6 176 15.0 15.0 15.0 0.4 191 chr3R 3848035 intron CG41099 + chr3R 3848130 intron CG41099 + chr3R 3848226 intron CG41099 + chr3R_6_3845001 chr3R_3845001 CanS-SH 1954 chr3R 4012440 4012510 chr3R 4012604 4012674 22 164 5.5 7.5 6.5 2.9 234 chr3R 4012440 intergenic not near genes chr3R 4012557 intergenic not near genes chr3R 4012674 intergenic not near genes chr3R_22_4010001 chr3R_4010001 CanS-SH 1955 chr3R 4078225 4078228 chr3R 4079875 4079878 INE-1 4 1650 29.0 40.5 34.8 0.1 1653 chr3R 4078225 5` UTR CG42402 + chr3R 4079052 intron CG42402 + chr3R 4079878 intron CG42402 + chr3R_4_4075001 chr3R_4075001 CanS-SH 1956 chr3R 4104979 4105014 chr3R 4110258 4110293 copia 8 5279 10.0 8.0 9.0 0.8 5314 chr3R 4104979 intergenic not near genes chr3R 4107636 intergenic not near genes chr3R 4110293 intergenic not near genes chr3R_8_4105001 chr3R_4105001 CanS-SH 1957 chr3R 4206008 4206049 chr3R 4211658 4211699 mdg3 12 5650 8.0 6.0 7.0 1.5 5691 chr3R 4206008 intron CG14636 - chr3R 4208854 intron CG14636 - chr3R 4211699 intron CG14636 - chr3R_12_4205001 chr3R_4205001 CanS-SH 1958 chr3R 4366700 4366735 chr3R 4375158 4375193 roo 14 8458 16.0 8.5 12.2 1.1 8493 chr3R 4366700 3` UTR CG1090 + chr3R 4370946 intergenic not near genes chr3R 4375193 5` UTR CR44922 + chr3R_14_4370001 chr3R_4370001 CanS-SH 1959 chr3R 4376489 4376576 chr3R 4377013 4377100 21 524 8.5 6.0 7.2 2.6 611 chr3R 4376489 5` UTR CR44922 + chr3R 4376794 5` UTR CR44922 + chr3R 4377100 5` UTR CR44922 + chr3R_21_4375001 chr3R_4375001 CanS-SH 1960 chr3R 4408351 4408388 chr3R 4412730 4412767 Juan 14 4379 17.0 16.0 16.5 0.8 4416 chr3R 4408351 intron CG32944 - chr3R 4410559 intron CG32944 - chr3R 4412767 intron CG32944 - chr3R_14_4410001 chr3R_4410001 CanS-SH 1961 chr3R 4413868 4413895 chr3R 4414434 4414461 INE-1 12 566 16.0 15.0 15.5 0.7 593 chr3R 4413868 intron CG32944 - chr3R 4414164 intron CG32944 - chr3R 4414461 intron CG32944 - chr3R_12_4410001 chr3R_4410001 CanS-SH 1962 chr3R 4475141 4475183 chr3R 4477488 4477530 15 2347 56.0 42.5 49.2 0.3 2389 chr3R 4475141 intron CG31523 - chr3R 4476336 intron CG31523 - chr3R 4477530 intron CG31523 - chr3R_15_4475001 chr3R_4475001 CanS-SH 1963 chr3R 4538811 4538829 chr3R 4540146 4540163 1360 7 1335 13.5 9.5 11.5 0.6 1352 chr3R 4538811 intron CG34357 - chr3R 4539487 intron CG34357 - chr3R 4540163 intron CG34357 - chr3R_7_4535001 chr3R_4535001 CanS-SH 1964 chr3R 4609490 4609526 chr3R 4610729 4610765 1360 14 1239 12.0 12.0 12.0 1.1 1275 chr3R 4609490 intergenic not near genes chr3R 4610128 intergenic not near genes chr3R 4610765 intergenic not near genes chr3R_14_4610001 chr3R_4610001 CanS-SH 1965 chr3R 4657205 4657220 chr3R 4657584 4657600 6 379 20.5 12.0 16.2 0.3 395 chr3R 4657205 exon spartin + chr3R 4657402 intron spartin + chr3R 4657600 exon spartin + chr3R_6_4655001 chr3R_4655001 CanS-SH 1966 chr3R 4657769 4657809 chr3R 4657927 4657967 9 158 17.0 16.5 16.8 0.5 198 chr3R 4657769 exon spartin + chr3R 4657868 3` UTR spartin + chr3R 4657967 3` UTR spartin + chr3R_9_4655001 chr3R_4655001 CanS-SH 1967 chr3R 4733611 4733654 chr3R 4733810 4733853 14 199 15.0 6.0 10.5 1.2 242 chr3R 4733611 intergenic not near genes chr3R 4733732 intergenic not near genes chr3R 4733853 intergenic not near genes chr3R_14_4730001 chr3R_4730001 CanS-SH 1968 chr3R 4753185 4753213 chr3R 4757563 4757591 F-element 7 4378 20.0 12.0 16.0 0.4 4406 chr3R 4753185 intron,exon atms +,CG44098 - chr3R 4755388 intron,intron atms +,CG44098 - chr3R 4757591 intron,exon atms +,CG44098 - chr3R_7_4755001 chr3R_4755001 CanS-SH 1969 chr3R 4796052 4796087 chr3R 4796250 4796285 17 198 17.0 11.5 14.2 1.1 233 chr3R 4796052 intron ctrip - chr3R 4796168 intron ctrip - chr3R 4796285 intron ctrip - chr3R_17_4795001 chr3R_4795001 CanS-SH 1970 chr3R 4887412 4887453 chr3R 4894864 4894906 rover 11 7452 9.0 5.5 7.2 1.3 7494 chr3R 4887412 intergenic not near genes chr3R 4891159 intergenic not near genes chr3R 4894906 intergenic not near genes chr3R_11_4890001 chr3R_4890001 CanS-SH 1971 chr3R 4922271 4922358 chr3R 4922425 4922512 20 154 7.0 8.5 7.8 2.3 241 chr3R 4922271 intron Cdep + chr3R 4922392 intron Cdep + chr3R 4922512 intron Cdep + chr3R_20_4920001 chr3R_4920001 CanS-SH 1972 chr3R 4943554 4943622 chr3R 4943734 4943802 7 180 15.0 6.5 10.8 0.6 248 chr3R 4943554 intron Cdep + chr3R 4943678 intron Cdep + chr3R 4943802 intron Cdep + chr3R_7_4940001 chr3R_4940001 CanS-SH 1973 chr3R 4998334 4998374 chr3R 4998511 4998551 18 177 12.5 15.0 13.8 1.2 217 chr3R 4998334 intron CG2022 - chr3R 4998442 intron CG2022 - chr3R 4998551 intron CG2022 - chr3R_18_4995001 chr3R_4995001 CanS-SH 1974 chr3R 5045788 5045828 chr3R 5052965 5053005 HMS-Beagle 13 7177 11.5 5.5 8.5 1.4 7217 chr3R 5045788 3` UTR CR43635 - chr3R 5049396 intergenic not near genes chr3R 5053005 intergenic CR45588 - chr3R_13_5045001 chr3R_5045001 CanS-SH 1975 chr3R 5067921 5067961 chr3R 5073513 5073552 mdg3 15 5592 17.5 9.5 13.5 1.0 5631 chr3R 5067921 intergenic not near genes chr3R 5070736 intergenic not near genes chr3R 5073552 intergenic not near genes chr3R_15_5070001 chr3R_5070001 CanS-SH 1976 chr3R 5105485 5105565 chr3R 5105643 5105723 23 158 9.0 9.0 9.0 2.3 238 chr3R 5105485 intergenic not near genes chr3R 5105604 intergenic not near genes chr3R 5105723 intergenic not near genes chr3R_23_5105001 chr3R_5105001 CanS-SH 1977 chr3R 5236151 5236191 chr3R 5236354 5236394 14 203 15.0 9.0 12.0 1.1 243 chr3R 5236151 3` UTR,3` UTR Mms19 +,rtp - chr3R 5236272 3` UTR,3` UTR Mms19 +,rtp - chr3R 5236394 3` UTR rtp - chr3R_14_5235001 chr3R_5235001 CanS-SH 1978 chr3R 5250838 5250906 chr3R 5251023 5251091 9 185 7.0 13.5 10.2 0.8 253 chr3R 5250838 intron CG12163 - chr3R 5250964 intron CG12163 - chr3R 5251091 intron CG12163 - chr3R_9_5250001 chr3R_5250001 CanS-SH 1979 chr3R 5311940 5311968 chr3R 5312124 5312152 12 184 11.5 9.0 10.2 1.1 212 chr3R 5311940 intron mtd - chr3R 5312046 intron mtd - chr3R 5312152 intron mtd - chr3R_12_5310001 chr3R_5310001 CanS-SH 1980 chr3R 5338341 5338368 chr3R 5343593 5343620 Rt1c 8 5252 12.5 8.0 10.2 0.7 5279 chr3R 5338341 intron mtd - chr3R 5340980 intron mtd - chr3R 5343620 intron mtd - chr3R_8_5340001 chr3R_5340001 CanS-SH 1981 chr3R 5445898 5445936 chr3R 5452433 5452471 Burdock 18 6535 14.0 7.0 10.5 1.6 6573 chr3R 5445898 intron CG14669 + chr3R 5449184 intron CG14669 + chr3R 5452471 intron CG14669 + chr3R_18_5445001 chr3R_5445001 CanS-SH 1982 chr3R 5525858 5525877 chr3R 5526074 5526094 10 217 20.0 8.0 14.0 0.7 236 chr3R 5525858 intron Itp-r83A + chr3R 5525976 intron Itp-r83A + chr3R 5526094 intron Itp-r83A + chr3R_10_5525001 chr3R_5525001 CanS-SH 1983 chr3R 5565608 5565698 chr3R 5565873 5565963 18 265 8.5 11.0 9.8 1.7 355 chr3R 5565608 intron CG12746 + chr3R 5565786 intron CG12746 + chr3R 5565963 intron CG12746 + chr3R_18_5565001 chr3R_5565001 CanS-SH 1984 chr3R 5627088 5627125 chr3R 5627574 5627610 11 486 15.5 8.0 11.8 0.9 522 chr3R 5627088 intergenic not near genes chr3R 5627349 intergenic not near genes chr3R 5627610 intergenic CG31551 + chr3R_11_5625001 chr3R_5625001 CanS-SH 1985 chr3R 5726034 5726068 chr3R 5726271 5726305 11 237 12.0 8.5 10.2 1.0 271 chr3R 5726034 intergenic not near genes chr3R 5726170 intergenic not near genes chr3R 5726305 intergenic not near genes chr3R_11_5725001 chr3R_5725001 CanS-SH 1986 chr3R 5745952 5745994 chr3R 5746268 5746310 pogo 8 316 16.0 6.5 11.2 0.7 358 chr3R 5745952 3` UTR Madm + chr3R 5746131 3` UTR Madm + chr3R 5746310 3` UTR Madm + chr3R_8_5745001 chr3R_5745001 CanS-SH 1987 chr3R 5746953 5746993 chr3R 5753219 5753259 diver 13 6266 15.0 8.5 11.8 1.0 6306 chr3R 5746953 intergenic Madm + chr3R 5750106 intergenic not near genes chr3R 5753259 intergenic CG2091 - chr3R_13_5750001 chr3R_5750001 CanS-SH 1988 chr3R 5767198 5767239 chr3R 5767683 5767724 10 485 17.0 9.0 13.0 0.7 526 chr3R 5767198 intron CG2082 - chr3R 5767461 intron CG2082 - chr3R 5767724 intron CG2082 - chr3R_10_5765001 chr3R_5765001 CanS-SH 1989 chr3R 5809048 5809091 chr3R 5809364 5809407 pogo 15 316 11.0 11.0 11.0 1.2 359 chr3R 5809048 3` UTR CG11000 + chr3R 5809228 3` UTR CG11000 + chr3R 5809407 3` UTR CG11000 + chr3R_15_5805001 chr3R_5805001 CanS-SH 1990 chr3R 5822305 5822397 chr3R 5823552 5823644 1360 16 1247 8.0 6.0 7.0 2.0 1339 chr3R 5822305 3` UTR CG2023 - chr3R 5822974 3` UTR CG2023 - chr3R 5823644 3` UTR CG2023 - chr3R_16_5820001 chr3R_5820001 CanS-SH 1991 chr3R 5836139 5836169 chr3R 5836318 5836348 12 179 17.0 17.5 17.2 0.7 209 chr3R 5836139 exon,3` UTR CG1208 +,CR45192 - chr3R 5836244 intron CG1208 + chr3R 5836348 intron CG1208 + chr3R_12_5835001 chr3R_5835001 CanS-SH 1992 chr3R 5860493 5860514 chr3R 5860671 5860692 6 178 17.5 10.0 13.8 0.4 199 chr3R 5860493 intron CG2017 - chr3R 5860592 intron CG2017 - chr3R 5860692 intron CG2017 - chr3R_6_5860001 chr3R_5860001 CanS-SH 1993 chr3R 5896906 5896949 chr3R 5897340 5897383 14 434 11.0 5.0 8.0 1.6 477 chr3R 5896906 intron CG34113 - chr3R 5897144 intron CG34113 - chr3R 5897383 intron CG34113 - chr3R_14_5895001 chr3R_5895001 CanS-SH 1994 chr3R 5927502 5927538 chr3R 5927817 5927852 pogo 16 315 14.5 12.5 13.5 1.1 350 chr3R 5927502 intron CG34113 - chr3R 5927677 intron CG34113 - chr3R 5927852 intron CG34113 - chr3R_16_5925001 chr3R_5925001 CanS-SH 1995 chr3R 5988848 5988877 chr3R 5989124 5989153 10 276 13.5 14.5 14.0 0.7 305 chr3R 5988848 intergenic CR44927 + chr3R 5989000 intergenic CR44927 + chr3R 5989153 intergenic CR44927 + chr3R_10_5985001 chr3R_5985001 CanS-SH 1996 chr3R 6015903 6015989 chr3R 6024459 6024545 Tirant 7 8556 5.0 8.5 6.8 0.9 8642 chr3R 6015903 intergenic not near genes chr3R 6020224 intergenic not near genes chr3R 6024545 intergenic not near genes chr3R_7_6020001 chr3R_6020001 CanS-SH 1997 chr3R 6029889 6029977 chr3R 6030164 6030253 8 276 5.5 5.0 5.2 1.3 364 chr3R 6029889 intergenic not near genes chr3R 6030071 intergenic not near genes chr3R 6030253 intergenic not near genes chr3R_8_6030001 chr3R_6030001 CanS-SH 1998 chr3R 6121109 6121122 chr3R 6121369 6121382 BS 5 260 10.5 7.5 9.0 0.5 273 chr3R 6121109 intergenic not near genes chr3R 6121246 intergenic not near genes chr3R 6121382 intergenic not near genes chr3R_5_6120001 chr3R_6120001 CanS-SH 1999 chr3R 6158449 6158479 chr3R 6167107 6167137 Tirant 6 8658 15.5 4.5 10.0 0.5 8688 chr3R 6158449 intergenic not near genes chr3R 6162793 intergenic not near genes chr3R 6167137 intergenic CG1077 + chr3R_6_6160001 chr3R_6160001 CanS-SH 2000 chr3R 6169689 6169768 chr3R 6169853 6169932 19 164 11.5 11.0 11.2 1.6 243 chr3R 6169689 exon CG1077 + chr3R 6169810 exon CG1077 + chr3R 6169932 exon CG1077 + chr3R_19_6165001 chr3R_6165001 CanS-SH 2001 chr3R 6175118 6175147 chr3R 6182465 6182494 HMS-Beagle2 7 7347 11.0 7.5 9.2 0.7 7376 chr3R 6175118 intergenic Osi1 + chr3R 6178806 intron CR45194 + chr3R 6182494 intergenic CR45194 + chr3R_7_6175001 chr3R_6175001 CanS-SH 2002 chr3R 6191106 6191190 chr3R 6191261 6191345 18 155 6.5 5.5 6.0 2.6 239 chr3R 6191106 intron NPFR + chr3R 6191226 intron NPFR + chr3R 6191345 intron NPFR + chr3R_18_6190001 chr3R_6190001 CanS-SH 2003 chr3R 6192913 6192986 chr3R 6193129 6193202 17 216 9.5 7.0 8.2 1.8 289 chr3R 6192913 intron NPFR + chr3R 6193058 intron NPFR + chr3R 6193202 intron NPFR + chr3R_17_6190001 chr3R_6190001 CanS-SH 2004 chr3R 6206229 6206257 chr3R 6206521 6206549 BS 8 292 15.5 11.0 13.2 0.6 320 chr3R 6206229 exon Osi24 + chr3R 6206389 intron Osi24 + chr3R 6206549 intron Osi24 + chr3R_8_6205001 chr3R_6205001 CanS-SH 2005 chr3R 6428751 6428810 chr3R 6428928 6428987 26 177 5.0 9.0 7.0 3.2 236 chr3R 6428751 intron gpp + chr3R 6428869 intron gpp + chr3R 6428987 intron gpp + chr3R_26_6425001 chr3R_6425001 CanS-SH 2006 chr3R 6461521 6461574 chr3R 6461676 6461729 26 155 11.0 5.5 8.2 2.8 208 chr3R 6461521 intergenic not near genes chr3R 6461625 intergenic not near genes chr3R 6461729 intergenic not near genes chr3R_26_6460001 chr3R_6460001 CanS-SH 2007 chr3R 6509961 6510001 chr3R 6515117 6515157 jockey 16 5156 16.0 10.0 13.0 1.1 5196 chr3R 6509961 intergenic not near genes chr3R 6512559 intergenic not near genes chr3R 6515157 intergenic not near genes chr3R_16_6510001 chr3R_6510001 CanS-SH 2008 chr3R 6515907 6515945 chr3R 6516171 6516209 9 264 13.0 9.5 11.2 0.7 302 chr3R 6515907 intergenic not near genes chr3R 6516058 intergenic not near genes chr3R 6516209 intergenic not near genes chr3R_9_6515001 chr3R_6515001 CanS-SH 2009 chr3R 6530048 6530082 chr3R 6530211 6530245 8 163 13.0 10.0 11.5 0.6 197 chr3R 6530048 3` UTR dpr11 - chr3R 6530146 3` UTR dpr11 - chr3R 6530245 3` UTR dpr11 - chr3R_8_6530001 chr3R_6530001 CanS-SH 2010 chr3R 6737438 6737476 chr3R 6739300 6739338 Doc 8 1862 10.5 9.0 9.8 0.7 1900 chr3R 6737438 intron pb - chr3R 6738388 intron pb - chr3R 6739338 intron pb - chr3R_8_6735001 chr3R_6735001 CanS-SH 2011 chr3R 6752497 6752527 chr3R 6755743 6755773 10 3246 31.0 29.5 30.2 0.3 3276 chr3R 6752497 intergenic zen - chr3R 6754135 exon zen - chr3R 6755773 intergenic bcd - chr3R_10_6750001 chr3R_6750001 CanS-SH 2012 chr3R 6769689 6769720 chr3R 6769857 6769888 13 168 13.0 19.5 16.2 0.8 199 chr3R 6769689 intron CR42721 + chr3R 6769788 intron CR42721 + chr3R 6769888 intron CR42721 + chr3R_13_6765001 chr3R_6765001 CanS-SH 2013 chr3R 6856308 6856400 chr3R 6856500 6856592 21 192 6.0 3.0 4.5 3.8 284 chr3R 6856308 intergenic not near genes chr3R 6856450 intergenic not near genes chr3R 6856592 intergenic not near genes chr3R_21_6855001 chr3R_6855001 CanS-SH 2014 chr3R 6862164 6862230 chr3R 6862326 6862392 19 162 9.0 8.5 8.8 1.9 228 chr3R 6862164 intergenic not near genes chr3R 6862278 intergenic not near genes chr3R 6862392 intergenic not near genes chr3R_19_6860001 chr3R_6860001 CanS-SH 2015 chr3R 6982402 6982439 chr3R 6982877 6982914 18 475 10.5 8.0 9.2 1.8 512 chr3R 6982402 intron Antp - chr3R 6982658 intron Antp - chr3R 6982914 intron Antp - chr3R_18_6980001 chr3R_6980001 CanS-SH 2016 chr3R 7103217 7103238 chr3R 7103368 7103389 8 151 13.0 11.0 12.0 0.6 172 chr3R 7103217 intron Alh - chr3R 7103303 intron Alh - chr3R 7103389 intron Alh - chr3R_8_7100001 chr3R_7100001 CanS-SH 2017 chr3R 7126469 7126499 chr3R 7126639 7126669 8 170 11.5 11.0 11.2 0.7 200 chr3R 7126469 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126569 3` UTR CG10068 - chr3R 7126669 3` UTR CG10068 - chr3R_8_7125001 chr3R_7125001 CanS-SH 2018 chr3R 7173616 7173688 chr3R 7173771 7173843 24 155 14.5 8.5 11.5 1.9 227 chr3R 7173616 intron sas + chr3R 7173730 intron sas + chr3R 7173843 intron sas + chr3R_24_7170001 chr3R_7170001 CanS-SH 2019 chr3R 7210519 7210607 chr3R 7210671 7210768 11 153 1.0 10.5 5.8 1.6 249 chr3R 7210519 intergenic not near genes chr3R 7210644 intergenic not near genes chr3R 7210768 intergenic not near genes chr3R_11_7210001 chr3R_7210001 CanS-SH 2020 chr3R 7217393 7217424 chr3R 7217689 7217720 9 296 14.0 7.0 10.5 0.8 327 chr3R 7217393 intergenic CG14605 -,CG14606 - chr3R 7217556 intergenic CG14605 -,CG14606 - chr3R 7217720 3` UTR CG14605 - chr3R_9_7215001 chr3R_7215001 CanS-SH 2021 chr3R 7258539 7258580 chr3R 7258701 7258742 18 162 14.0 10.0 12.0 1.4 203 chr3R 7258539 intron Gld - chr3R 7258640 intron Gld - chr3R 7258742 intron Gld - chr3R_18_7255001 chr3R_7255001 CanS-SH 2022 chr3R 7302232 7302300 chr3R 7302399 7302467 14 167 5.0 9.0 7.0 1.8 235 chr3R 7302232 intron rn - chr3R 7302350 intron rn - chr3R 7302467 intron rn - chr3R_14_7300001 chr3R_7300001 CanS-SH 2023 chr3R 7402114 7402165 chr3R 7402295 7402345 17 181 9.0 6.5 7.8 1.9 231 chr3R 7402114 intergenic not near genes chr3R 7402230 intergenic not near genes chr3R 7402345 intergenic not near genes chr3R_17_7400001 chr3R_7400001 CanS-SH 2024 chr3R 7416546 7416623 chr3R 7416706 7416783 22 160 6.5 10.0 8.2 2.4 237 chr3R 7416546 intergenic not near genes chr3R 7416664 intergenic not near genes chr3R 7416783 intergenic not near genes chr3R_22_7415001 chr3R_7415001 CanS-SH 2025 chr3R 7441892 7441960 chr3R 7442054 7442122 16 162 7.5 6.0 6.8 2.1 230 chr3R 7441892 3` UTR CG14598 + chr3R 7442007 intergenic CG14598 + chr3R 7442122 intergenic CG14598 + chr3R_16_7440001 chr3R_7440001 CanS-SH 2026 chr3R 7447948 7448003 chr3R 7448101 7448156 10 153 8.5 12.5 10.5 0.9 208 chr3R 7447948 intergenic not near genes chr3R 7448052 intergenic not near genes chr3R 7448156 intergenic not near genes chr3R_10_7445001 chr3R_7445001 CanS-SH 2027 chr3R 7554085 7554116 chr3R 7554583 7554614 10 498 13.5 8.0 10.8 0.8 529 chr3R 7554085 intergenic not near genes chr3R 7554350 intergenic not near genes chr3R 7554614 intergenic not near genes chr3R_10_7550001 chr3R_7550001 CanS-SH 2028 chr3R 7558537 7558554 chr3R 7563276 7563293 Doc 5 4739 7.0 10.5 8.8 0.5 4756 chr3R 7558537 intergenic not near genes chr3R 7560915 intergenic not near genes chr3R 7563293 intergenic not near genes chr3R_5_7560001 chr3R_7560001 CanS-SH 2029 chr3R 7621471 7621530 chr3R 7621636 7621696 16 165 0.0 5.0 2.5 4.6 225 chr3R 7621471 intron CG34127 - chr3R 7621584 intron CG34127 - chr3R 7621696 intron CG34127 - chr3R_16_7620001 chr3R_7620001 CanS-SH 2030 chr3R 7632693 7632735 chr3R 7632875 7632917 11 182 17.5 6.5 12.0 0.8 224 chr3R 7632693 intron CG34127 - chr3R 7632805 intron CG34127 - chr3R 7632917 intron CG34127 - chr3R_11_7630001 chr3R_7630001 CanS-SH 2031 chr3R 7652417 7652442 chr3R 7652606 7652631 7 189 14.0 10.0 12.0 0.5 214 chr3R 7652417 intergenic not near genes chr3R 7652524 intergenic not near genes chr3R 7652631 intergenic not near genes chr3R_7_7650001 chr3R_7650001 CanS-SH 2032 chr3R 7690282 7690365 chr3R 7690437 7690520 22 155 5.0 9.0 7.0 2.8 238 chr3R 7690282 intron Nlg1 + chr3R 7690401 intron Nlg1 + chr3R 7690520 intron Nlg1 + chr3R_22_7690001 chr3R_7690001 CanS-SH 2033 chr3R 7694520 7694552 chr3R 7713656 7713688 invader3 14 19136 10.0 7.0 8.5 1.5 19168 chr3R 7694520 3` UTR Nlg1 + chr3R 7704104 intergenic not near genes chr3R 7713688 intergenic not near genes chr3R_14_7700001 chr3R_7700001 CanS-SH 2034 chr3R 7729404 7729433 chr3R 7737417 7737446 Stalker2 13 8013 18.5 10.0 14.2 0.9 8042 chr3R 7729404 intergenic not near genes chr3R 7733425 intergenic not near genes chr3R 7737446 intergenic not near genes chr3R_13_7730001 chr3R_7730001 CanS-SH 2035 chr3R 7760195 7760233 chr3R 7760779 7760817 12 584 16.0 14.0 15.0 0.8 622 chr3R 7760195 intron Sp7 + chr3R 7760506 intron Sp7 + chr3R 7760817 5` UTR Sp7 + chr3R_12_7760001 chr3R_7760001 CanS-SH 2036 chr3R 7934533 7934601 chr3R 7934698 7934766 15 165 10.5 6.5 8.5 1.6 233 chr3R 7934533 intron dsx - chr3R 7934650 intron dsx - chr3R 7934766 intron dsx - chr3R_15_7930001 chr3R_7930001 CanS-SH 2037 chr3R 7938198 7938253 chr3R 7938383 7938438 21 185 12.5 9.5 11.0 1.8 240 chr3R 7938198 intron dsx - chr3R 7938318 intron dsx - chr3R 7938438 intron dsx - chr3R_21_7935001 chr3R_7935001 CanS-SH 2038 chr3R 7973260 7973292 chr3R 7974397 7974429 1360 13 1137 16.5 13.0 14.8 0.8 1169 chr3R 7973260 intergenic not near genes chr3R 7973844 intergenic not near genes chr3R 7974429 3` UTR CD98hc - chr3R_13_7970001 chr3R_7970001 CanS-SH 2039 chr3R 8038276 8038301 chr3R 8038434 8038459 10 158 7.5 6.5 7.0 1.2 183 chr3R 8038276 5` UTR CR44936 + chr3R 8038368 5` UTR CR44936 + chr3R 8038459 5` UTR CR44936 + chr3R_10_8035001 chr3R_8035001 CanS-SH 2040 chr3R 8041197 8041202 chr3R 8041377 8041382 4 180 39.0 31.0 35.0 0.1 185 chr3R 8041197 intergenic CG43060 + chr3R 8041290 intron CG43060 + chr3R 8041382 exon CG43060 + chr3R_4_8040001 chr3R_8040001 CanS-SH 2041 chr3R 8054774 8054803 chr3R 8055212 8055241 8 438 15.0 5.5 10.2 0.7 467 chr3R 8054774 intron CG43060 + chr3R 8055008 intron CG43060 + chr3R 8055241 intron CG43060 + chr3R_8_8055001 chr3R_8055001 CanS-SH 2042 chr3R 8090204 8090293 chr3R 8090456 8090545 17 252 9.0 7.0 8.0 1.9 341 chr3R 8090204 5` UTR CR44330 + chr3R 8090374 intergenic CR44330 + chr3R 8090545 intergenic CR44330 + chr3R_17_8090001 chr3R_8090001 CanS-SH 2043 chr3R 8090490 8090512 chr3R 8094042 8094064 297 13 3552 7.0 12.0 9.5 1.2 3574 chr3R 8090490 intergenic CR44330 + chr3R 8092277 intergenic not near genes chr3R 8094064 intergenic CG7900 + chr3R_13_8090001 chr3R_8090001 CanS-SH 2044 chr3R 8094349 8094381 chr3R 8099729 8099761 Transpac 13 5380 17.0 11.0 14.0 0.9 5412 chr3R 8094349 intron CG7900 + chr3R 8097055 intron CG7900 + chr3R 8099761 intron CG7900 + chr3R_13_8095001 chr3R_8095001 CanS-SH 2045 chr3R 8101697 8101737 chr3R 8104856 8104896 G2 13 3159 10.0 11.5 10.8 1.1 3199 chr3R 8101697 exon CG7900 + chr3R 8103296 intron CG7900 + chr3R 8104896 3` UTR CG7900 + chr3R_13_8100001 chr3R_8100001 CanS-SH 2046 chr3R 8107325 8107367 chr3R 8107533 8107576 17 209 18.5 12.5 15.5 1.0 251 chr3R 8107325 intron puc + chr3R 8107450 intron puc + chr3R 8107576 intron puc + chr3R_17_8105001 chr3R_8105001 CanS-SH 2047 chr3R 8154220 8154306 chr3R 8154380 8154466 7 160 9.5 6.5 8.0 0.8 246 chr3R 8154220 intron grn - chr3R 8154343 intron grn - chr3R 8154466 intron grn - chr3R_7_8150001 chr3R_8150001 CanS-SH 2048 chr3R 8207502 8207577 chr3R 8208423 8208497 F-element 5 921 9.5 7.5 8.5 0.5 995 chr3R 8207502 intergenic not near genes chr3R 8208000 intergenic not near genes chr3R 8208497 intergenic not near genes chr3R_5_8205001 chr3R_8205001 CanS-SH 2049 chr3R 8247839 8247913 chr3R 8247996 8248070 23 157 10.5 9.0 9.8 2.1 231 chr3R 8247839 3` UTR,3` UTR CG18749 +,CG33722 + chr3R 8247954 3` UTR,3` UTR CG18749 +,CG33722 + chr3R 8248070 intergenic CG18749 +,CG33722 +,CG15864 + chr3R_23_8245001 chr3R_8245001 CanS-SH 2050 chr3R 8288010 8288051 chr3R 8288609 8288650 20 599 17.5 8.0 12.8 1.4 640 chr3R 8288010 5` UTR CG11671 + chr3R 8288330 exon CG11671 + chr3R 8288650 intergenic CG11671 + chr3R_20_8285001 chr3R_8285001 CanS-SH 2051 chr3R 8393512 8393598 chr3R 8393671 8393757 22 159 6.0 11.5 8.8 2.2 245 chr3R 8393512 intron CG45263 - chr3R 8393634 intron CG45263 - chr3R 8393757 intron CG45263 - chr3R_22_8390001 chr3R_8390001 CanS-SH 2052 chr3R 8402959 8402983 chr3R 8412200 8412224 roo 12 9241 12.5 8.0 10.2 1.1 9265 chr3R 8402959 intron CG45263 - chr3R 8407592 intron CG45263 - chr3R 8412224 intron CG45263 - chr3R_12_8405001 chr3R_8405001 CanS-SH 2053 chr3R 8478009 8478094 chr3R 8478164 8478249 22 155 5.5 11.0 8.2 2.4 240 chr3R 8478009 intergenic CG45263 - chr3R 8478129 intergenic not near genes chr3R 8478249 intergenic not near genes chr3R_22_8475001 chr3R_8475001 CanS-SH 2054 chr3R 8538271 8538352 chr3R 8538429 8538510 25 158 8.0 5.0 6.5 3.3 239 chr3R 8538271 intergenic not near genes chr3R 8538390 intergenic not near genes chr3R 8538510 intergenic not near genes chr3R_25_8535001 chr3R_8535001 CanS-SH 2055 chr3R 8570416 8570452 chr3R 8575125 8575163 HMS-Beagle 6 4710 10.5 6.5 8.5 0.6 4747 chr3R 8570416 intergenic not near genes chr3R 8572790 intergenic not near genes chr3R 8575163 intergenic not near genes chr3R_6_8570001 chr3R_8570001 CanS-SH 2056 chr3R 8601719 8601745 chr3R 8610947 8610973 roo 15 9228 17.0 14.5 15.8 0.9 9254 chr3R 8601719 intron 5-HT2B + chr3R 8606346 intron 5-HT2B + chr3R 8610973 intron 5-HT2B + chr3R_15_8605001 chr3R_8605001 CanS-SH 2057 chr3R 8685224 8685262 chr3R 8685399 8685437 18 175 14.0 8.5 11.2 1.5 213 chr3R 8685224 intron CR44937 - chr3R 8685330 intron CR44937 - chr3R 8685437 intron CR44937 - chr3R_18_8685001 chr3R_8685001 CanS-SH 2058 chr3R 8707252 8707332 chr3R 8709790 8709848 jockey 20 2532 0.0 7.0 3.5 4.4 2596 chr3R 8707252 intergenic not near genes chr3R 8708550 intergenic not near genes chr3R 8709848 intergenic not near genes chr3R_20_8705001 chr3R_8705001 CanS-SH 2059 chr3R 8798582 8798670 chr3R 8798741 8798828 27 158 0.0 9.5 4.8 4.7 246 chr3R 8798582 intron,intron Pif1A -,Pif1B - chr3R 8798705 intron,intron Pif1A -,Pif1B - chr3R 8798828 intron,intron Pif1A -,Pif1B - chr3R_27_8795001 chr3R_8795001 CanS-SH 2060 chr3R 8868748 8868764 chr3R 8872665 8872681 297 5 3917 17.0 10.5 13.8 0.3 3933 chr3R 8868748 intron pyd - chr3R 8870714 intron pyd - chr3R 8872681 intron pyd - chr3R_5_8870001 chr3R_8870001 CanS-SH 2061 chr3R 8898159 8898198 chr3R 8913814 8913853 297 10 15655 16.0 7.5 11.8 0.8 15694 chr3R 8898159 intron pyd - chr3R 8906006 intron pyd - chr3R 8913853 intron pyd - chr3R_10_8905001 chr3R_8905001 CanS-SH 2062 chr3R 8917813 8917908 chr3R 8917969 8918063 28 155 11.0 6.5 8.8 2.9 250 chr3R 8917813 intron pyd - chr3R 8917938 intron pyd - chr3R 8918063 intron pyd - chr3R_28_8915001 chr3R_8915001 CanS-SH 2063 chr3R 9379097 9379156 chr3R 9379254 9379313 5 157 0.0 8.5 4.2 1.0 216 chr3R 9379097 intron FER - chr3R 9379205 intron FER - chr3R 9379313 intron FER - chr3R_5_9375001 chr3R_9375001 CanS-SH 2064 chr3R 9381311 9381326 chr3R 9381464 9381479 7 153 16.5 6.0 11.2 0.6 168 chr3R 9381311 intron FER - chr3R 9381395 intron FER - chr3R 9381479 intron FER - chr3R_7_9380001 chr3R_9380001 CanS-SH 2065 chr3R 9382748 9382784 chr3R 9382948 9382984 11 200 17.0 6.5 11.8 0.9 236 chr3R 9382748 intron FER - chr3R 9382866 intron FER - chr3R 9382984 intron FER - chr3R_11_9380001 chr3R_9380001 CanS-SH 2066 chr3R 9427873 9427923 chr3R 9428041 9428091 8 168 13.5 14.5 14.0 0.5 218 chr3R 9427873 intron ps + chr3R 9427982 intron ps + chr3R 9428091 intron ps + chr3R_8_9425001 chr3R_9425001 CanS-SH 2067 chr3R 9601396 9601447 chr3R 9601589 9601640 6 193 13.0 9.5 11.2 0.5 244 chr3R 9601396 intron CG8312 + chr3R 9601518 intron CG8312 + chr3R 9601640 intron CG8312 + chr3R_6_9600001 chr3R_9600001 CanS-SH 2068 chr3R 9647442 9647531 chr3R 9647763 9647852 18 321 7.0 13.0 10.0 1.6 410 chr3R 9647442 intron Dh44 + chr3R 9647647 intron Dh44 + chr3R 9647852 intron Dh44 + chr3R_18_9645001 chr3R_9645001 CanS-SH 2069 chr3R 9663562 9663594 chr3R 9663764 9663796 9 202 11.0 9.0 10.0 0.8 234 chr3R 9663562 intron CG9492 - chr3R 9663679 intron CG9492 - chr3R 9663796 intron CG9492 - chr3R_9_9660001 chr3R_9660001 CanS-SH 2070 chr3R 10255322 10255355 chr3R 10260837 10260870 I-element 10 5515 19.5 10.0 14.8 0.6 5548 chr3R 10255322 intergenic Sirt6 -,CG3999 + chr3R 10258096 intron Sirt6 - chr3R 10260870 exon Sirt6 - chr3R_10_10255001 chr3R_10255001 CanS-SH 2071 chr3R 10572367 10572387 chr3R 10572522 10572542 8 155 14.5 8.5 11.5 0.6 175 chr3R 10572367 intron hth - chr3R 10572454 intron hth - chr3R 10572542 intron hth - chr3R_8_10570001 chr3R_10570001 CanS-SH 2072 chr3R 11048517 11048589 chr3R 11048676 11048748 19 159 6.5 9.5 8.0 2.1 231 chr3R 11048517 3` UTR CG34114 + chr3R 11048632 3` UTR CG34114 + chr3R 11048748 3` UTR CG34114 + chr3R_19_11045001 chr3R_11045001 CanS-SH 2073 chr3R 11056833 11056902 chr3R 11056986 11057069 6 160 7.0 0.0 3.5 1.3 236 chr3R 11056833 intergenic not near genes chr3R 11056951 intergenic not near genes chr3R 11057069 intergenic not near genes chr3R_6_11055001 chr3R_11055001 CanS-SH 2074 chr3R 11065533 11065612 chr3R 11071260 11071339 297 11 5727 6.5 7.5 7.0 1.4 5806 chr3R 11065533 intergenic not near genes chr3R 11068436 intergenic not near genes chr3R 11071339 intergenic not near genes chr3R_11_11065001 chr3R_11065001 CanS-SH 2075 chr3R 11085386 11085485 chr3R 11085538 11085637 35 152 4.5 7.5 6.0 5.0 251 chr3R 11085386 3` UTR CR44940 - chr3R 11085512 intergenic CR44940 - chr3R 11085637 intergenic CR44940 - chr3R_35_11085001 chr3R_11085001 CanS-SH 2076 chr3R 11102261 11102286 chr3R 11102417 11102442 10 156 16.5 8.0 12.2 0.8 181 chr3R 11102261 intergenic not near genes chr3R 11102352 intergenic not near genes chr3R 11102442 intergenic not near genes chr3R_10_11100001 chr3R_11100001 CanS-SH 2077 chr3R 11148863 11148879 chr3R 11149014 11149030 10 151 15.0 9.0 12.0 0.8 167 chr3R 11148863 intergenic not near genes chr3R 11148946 intergenic not near genes chr3R 11149030 intergenic not near genes chr3R_10_11145001 chr3R_11145001 CanS-SH 2078 chr3R 11174524 11174611 chr3R 11175313 11175400 9 789 31.0 44.0 37.5 0.2 876 chr3R 11174524 exon Ugt86Dj - chr3R 11174962 intron Ugt86Dj - chr3R 11175400 5` UTR Ugt86Dj - chr3R_9_11170001 chr3R_11170001 CanS-SH 2079 chr3R 11197921 11197967 chr3R 11198095 11198141 10 174 11.5 2.5 7.0 1.2 220 chr3R 11197921 intron cu + chr3R 11198031 intron cu + chr3R 11198141 intron cu + chr3R_10_11195001 chr3R_11195001 CanS-SH 2080 chr3R 11269380 11269466 chr3R 11269580 11269666 13 200 6.5 6.5 6.5 1.7 286 chr3R 11269380 intergenic CR31386 - chr3R 11269523 3` UTR CR31386 - chr3R 11269666 3` UTR CR31386 - chr3R_13_11265001 chr3R_11265001 CanS-SH 2081 chr3R 11307129 11307202 chr3R 11307291 11307364 19 162 7.5 10.5 9.0 1.9 235 chr3R 11307129 intergenic not near genes chr3R 11307246 intergenic not near genes chr3R 11307364 intergenic not near genes chr3R_19_11305001 chr3R_11305001 CanS-SH 2082 chr3R 11325280 11325341 chr3R 11325450 11325511 20 170 0.0 8.0 4.0 4.0 231 chr3R 11325280 intergenic not near genes chr3R 11325396 intergenic not near genes chr3R 11325511 intergenic not near genes chr3R_20_11325001 chr3R_11325001 CanS-SH 2083 chr3R 11342484 11342570 chr3R 11342635 11342721 24 151 8.0 14.5 11.2 2.0 237 chr3R 11342484 intron pros + chr3R 11342602 intron pros + chr3R 11342721 intron pros + chr3R_24_11340001 chr3R_11340001 CanS-SH 2084 chr3R 11379173 11379200 chr3R 11388403 11388430 roo 7 9230 0.5 8.0 4.2 1.3 9257 chr3R 11379173 intron pros + chr3R 11383802 intron pros + chr3R 11388430 intron pros + chr3R_7_11380001 chr3R_11380001 CanS-SH 2085 chr3R 11491544 11491625 chr3R 11491695 11491776 22 151 7.0 7.5 7.2 2.7 232 chr3R 11491544 intergenic not near genes chr3R 11491660 intergenic not near genes chr3R 11491776 intergenic not near genes chr3R_22_11490001 chr3R_11490001 CanS-SH 2086 chr3R 11518751 11518818 chr3R 11518917 11518984 15 166 8.0 7.0 7.5 1.8 233 chr3R 11518751 intergenic not near genes chr3R 11518868 intergenic not near genes chr3R 11518984 intergenic not near genes chr3R_15_11515001 chr3R_11515001 CanS-SH 2087 chr3R 11538140 11538208 chr3R 11538300 11538368 14 160 10.5 4.0 7.2 1.7 228 chr3R 11538140 intron dpr4 - chr3R 11538254 intron dpr4 - chr3R 11538368 intron dpr4 - chr3R_14_11535001 chr3R_11535001 CanS-SH 2088 chr3R 11594177 11594210 chr3R 11594330 11594363 11 153 5.5 13.5 9.5 1.0 186 chr3R 11594177 intron Jupiter - chr3R 11594270 intron Jupiter - chr3R 11594363 intron Jupiter - chr3R_11_11590001 chr3R_11590001 CanS-SH 2089 chr3R 11639162 11639245 chr3R 11639382 11639465 22 220 7.0 9.5 8.2 2.4 303 chr3R 11639162 intron Csk - chr3R 11639314 intron Csk - chr3R 11639465 intron Csk - chr3R_22_11635001 chr3R_11635001 CanS-SH 2090 chr3R 11694655 11694732 chr3R 11694824 11694900 28 168 10.0 8.0 9.0 2.8 245 chr3R 11694655 intergenic Fer3 - chr3R 11694778 intergenic Fer3 - chr3R 11694900 intergenic not near genes chr3R_28_11690001 chr3R_11690001 CanS-SH 2091 chr3R 11695669 11695762 chr3R 11695825 11695918 34 156 10.0 8.0 9.0 3.4 249 chr3R 11695669 intergenic not near genes chr3R 11695794 intergenic not near genes chr3R 11695918 intergenic not near genes chr3R_34_11695001 chr3R_11695001 CanS-SH 2092 chr3R 11708650 11708715 chr3R 11708801 11708867 15 151 8.5 0.0 4.2 2.9 217 chr3R 11708650 intergenic not near genes chr3R 11708758 intergenic not near genes chr3R 11708867 intergenic not near genes chr3R_15_11705001 chr3R_11705001 CanS-SH 2093 chr3R 11738341 11738430 chr3R 11742019 11742115 13 3682 54.0 47.5 50.8 0.3 3774 chr3R 11738341 exon Blm - chr3R 11740228 exon Blm - chr3R 11742115 5` UTR CG14722 + chr3R_13_11740001 chr3R_11740001 CanS-SH 2094 chr3R 11840998 11841036 chr3R 11846264 11846302 BS 14 5266 12.0 5.5 8.8 1.4 5304 chr3R 11840998 intron CG6959 - chr3R 11843650 intron CG6959 - chr3R 11846302 intron CG6959 - chr3R_14_11840001 chr3R_11840001 CanS-SH 2095 chr3R 11914301 11914388 chr3R 11914461 11914548 37 160 9.0 12.5 10.8 3.1 247 chr3R 11914301 intron Cad87A - chr3R 11914424 intron Cad87A - chr3R 11914548 intron Cad87A - chr3R_37_11910001 chr3R_11910001 CanS-SH 2096 chr3R 11919255 11919314 chr3R 11919418 11919477 12 163 2.0 10.0 6.0 1.7 222 chr3R 11919255 intron Cad87A - chr3R 11919366 intron Cad87A - chr3R 11919477 intron Cad87A - chr3R_12_11915001 chr3R_11915001 CanS-SH 2097 chr3R 11930171 11930249 chr3R 11930330 11930408 28 159 13.0 11.0 12.0 2.2 237 chr3R 11930171 intron Cad87A - chr3R 11930290 intron Cad87A - chr3R 11930408 intron Cad87A - chr3R_28_11930001 chr3R_11930001 CanS-SH 2098 chr3R 11943119 11943220 chr3R 11943546 11943647 11 427 3.5 3.5 3.5 2.4 528 chr3R 11943119 intron Cad87A - chr3R 11943383 intron Cad87A - chr3R 11943647 intron Cad87A - chr3R_11_11940001 chr3R_11940001 CanS-SH 2099 chr3R 11945322 11945405 chr3R 11945495 11945578 18 173 5.0 9.5 7.2 2.2 256 chr3R 11945322 intron Cad87A - chr3R 11945450 intron Cad87A - chr3R 11945578 intron Cad87A - chr3R_18_11945001 chr3R_11945001 CanS-SH 2100 chr3R 11957783 11957818 chr3R 11958141 11958176 S-element 14 358 16.0 5.5 10.8 1.2 393 chr3R 11957783 intergenic not near genes chr3R 11957980 intergenic not near genes chr3R 11958176 intergenic not near genes chr3R_14_11955001 chr3R_11955001 CanS-SH 2101 chr3R 12022825 12022854 chr3R 12025077 12025106 pogo 9 2252 10.0 6.5 8.2 1.0 2281 chr3R 12022825 intergenic not near genes chr3R 12023966 intergenic not near genes chr3R 12025106 intergenic not near genes chr3R_9_12020001 chr3R_12020001 CanS-SH 2102 chr3R 12052492 12052523 chr3R 12052682 12052713 9 190 4.5 10.0 7.2 1.1 221 chr3R 12052492 intergenic not near genes chr3R 12052602 intergenic not near genes chr3R 12052713 intergenic not near genes chr3R_9_12050001 chr3R_12050001 CanS-SH 2103 chr3R 12058610 12058648 chr3R 12059133 12059171 19 523 12.5 9.5 11.0 1.6 561 chr3R 12058610 intergenic not near genes chr3R 12058890 intergenic not near genes chr3R 12059171 intergenic not near genes chr3R_19_12055001 chr3R_12055001 CanS-SH 2104 chr3R 12102807 12102863 chr3R 12102983 12103039 17 176 10.5 9.5 10.0 1.5 232 chr3R 12102807 intron dpr17 + chr3R 12102923 intron dpr17 + chr3R 12103039 intron dpr17 + chr3R_17_12100001 chr3R_12100001 CanS-SH 2105 chr3R 12170186 12170224 chr3R 12170405 12170443 13 219 12.5 9.5 11.0 1.1 257 chr3R 12170186 intergenic not near genes chr3R 12170314 intergenic not near genes chr3R 12170443 intergenic not near genes chr3R_13_12170001 chr3R_12170001 CanS-SH 2106 chr3R 12214277 12214351 chr3R 12214443 12214517 5 166 7.5 7.0 7.2 0.6 240 chr3R 12214277 3` UTR CG4848 - chr3R 12214397 3` UTR CG4848 - chr3R 12214517 3` UTR,5` UTR CG4848 -,CG14742 + chr3R_5_12210001 chr3R_12210001 CanS-SH 2107 chr3R 12246697 12246773 chr3R 12246856 12246932 35 159 9.5 5.5 7.5 4.1 235 chr3R 12246697 intergenic not near genes chr3R 12246814 intergenic not near genes chr3R 12246932 intergenic not near genes chr3R_35_12245001 chr3R_12245001 CanS-SH 2108 chr3R 12369430 12369464 chr3R 12371860 12371894 14 2430 18.5 48.0 33.2 0.4 2464 chr3R 12369430 intergenic GstD1 - chr3R 12370662 intergenic not near genes chr3R 12371894 intergenic GstD2 + chr3R_14_12370001 chr3R_12370001 CanS-SH 2109 chr3R 12392817 12392867 chr3R 12392992 12393042 20 175 12.5 7.5 10.0 1.8 225 chr3R 12392817 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12392930 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393042 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_20_12390001 chr3R_12390001 CanS-SH 2110 chr3R 12429309 12429387 chr3R 12429469 12429547 35 160 10.0 9.5 9.8 3.2 238 chr3R 12429309 intergenic CG5641 -,CG5245 + chr3R 12429428 intergenic CG5245 +,CG5641 - chr3R 12429547 intergenic CG5245 +,CG5641 - chr3R_35_12425001 chr3R_12425001 CanS-SH 2111 chr3R 12436163 12436231 chr3R 12436315 12436383 15 152 8.0 10.0 9.0 1.5 220 chr3R 12436163 intergenic Desat2 + chr3R 12436273 5` UTR Desat2 + chr3R 12436383 5` UTR Desat2 + chr3R_15_12435001 chr3R_12435001 CanS-SH 2112 chr3R 12445405 12445424 chr3R 12445602 12445621 10 197 27.0 24.5 25.8 0.4 216 chr3R 12445405 intron Desat1 + chr3R 12445513 intron Desat1 + chr3R 12445621 intron Desat1 + chr3R_10_12445001 chr3R_12445001 CanS-SH 2113 chr3R 12538106 12538203 chr3R 12538260 12538356 22 154 4.5 4.5 4.5 4.0 250 chr3R 12538106 intron Octbeta3R - chr3R 12538231 intron Octbeta3R - chr3R 12538356 intron Octbeta3R - chr3R_22_12535001 chr3R_12535001 CanS-SH 2114 chr3R 12568429 12568516 chr3R 12568584 12568671 19 155 8.0 10.0 9.0 1.9 242 chr3R 12568429 intron Octbeta2R - chr3R 12568550 intron Octbeta2R - chr3R 12568671 intron Octbeta2R - chr3R_19_12565001 chr3R_12565001 CanS-SH 2115 chr3R 12599312 12599397 chr3R 12599470 12599555 30 158 9.0 10.0 9.5 2.9 243 chr3R 12599312 intergenic not near genes chr3R 12599434 intergenic not near genes chr3R 12599555 intergenic not near genes chr3R_30_12595001 chr3R_12595001 CanS-SH 2116 chr3R 12628553 12628615 chr3R 12628710 12628773 19 158 11.0 10.5 10.8 1.6 220 chr3R 12628553 intron Snx3 + chr3R 12628663 intron Snx3 + chr3R 12628773 intron Snx3 + chr3R_19_12625001 chr3R_12625001 CanS-SH 2117 chr3R 12725874 12725926 chr3R 12726054 12726106 18 180 10.5 7.5 9.0 1.8 232 chr3R 12725874 intergenic not near genes chr3R 12725990 intergenic not near genes chr3R 12726106 intergenic not near genes chr3R_18_12725001 chr3R_12725001 CanS-SH 2118 chr3R 12763037 12763085 chr3R 12763200 12763248 22 163 6.0 6.0 6.0 3.1 211 chr3R 12763037 intron beat-Vc - chr3R 12763142 intron beat-Vc - chr3R 12763248 intron beat-Vc - chr3R_22_12760001 chr3R_12760001 CanS-SH 2119 chr3R 12766016 12766044 chr3R 12766215 12766243 13 199 19.0 8.5 13.8 0.9 227 chr3R 12766016 intron beat-Vc - chr3R 12766130 intron beat-Vc - chr3R 12766243 intron beat-Vc - chr3R_13_12765001 chr3R_12765001 CanS-SH 2120 chr3R 12780206 12780291 chr3R 12780394 12780480 BS 18 188 7.5 7.5 7.5 2.1 274 chr3R 12780206 intron beat-Vc - chr3R 12780343 intron beat-Vc - chr3R 12780480 intron beat-Vc - chr3R_18_12780001 chr3R_12780001 CanS-SH 2121 chr3R 12786383 12786423 chr3R 12786818 12786858 12 435 9.5 5.0 7.2 1.5 475 chr3R 12786383 intergenic not near genes chr3R 12786620 intergenic not near genes chr3R 12786858 intergenic not near genes chr3R_12_12785001 chr3R_12785001 CanS-SH 2122 chr3R 12818959 12819049 chr3R 12819117 12819208 16 158 10.0 9.0 9.5 1.5 249 chr3R 12818959 intergenic not near genes chr3R 12819084 intergenic not near genes chr3R 12819208 intergenic not near genes chr3R_16_12815001 chr3R_12815001 CanS-SH 2123 chr3R 12850223 12850268 chr3R 12850415 12850460 13 192 16.0 4.0 10.0 1.2 237 chr3R 12850223 intergenic CR44234 - chr3R 12850342 intergenic CR44234 - chr3R 12850460 3` UTR CR44234 - chr3R_13_12850001 chr3R_12850001 CanS-SH 2124 chr3R 12858680 12858755 chr3R 12858836 12858911 21 156 0.0 4.0 2.0 7.0 231 chr3R 12858680 intron CG10126 - chr3R 12858796 intron CG10126 - chr3R 12858911 intron CG10126 - chr3R_21_12855001 chr3R_12855001 CanS-SH 2125 chr3R 12864482 12864559 chr3R 12865059 12865136 roo 5 577 6.0 6.5 6.2 0.7 654 chr3R 12864482 intergenic not near genes chr3R 12864809 intergenic not near genes chr3R 12865136 intergenic not near genes chr3R_5_12860001 chr3R_12860001 CanS-SH 2126 chr3R 12866421 12866460 chr3R 12866647 12866686 11 226 18.0 5.0 11.5 0.9 265 chr3R 12866421 intergenic not near genes chr3R 12866554 intergenic not near genes chr3R 12866686 intergenic not near genes chr3R_11_12865001 chr3R_12865001 CanS-SH 2127 chr3R 12876896 12876971 chr3R 12877054 12877129 27 158 9.0 8.0 8.5 2.8 233 chr3R 12876896 intergenic not near genes chr3R 12877012 intergenic not near genes chr3R 12877129 intergenic not near genes chr3R_27_12875001 chr3R_12875001 CanS-SH 2128 chr3R 12881483 12881503 chr3R 12882034 12882054 9 551 7.0 7.5 7.2 1.1 571 chr3R 12881483 intergenic not near genes chr3R 12881768 intergenic not near genes chr3R 12882054 intergenic not near genes chr3R_9_12880001 chr3R_12880001 CanS-SH 2129 chr3R 12920096 12920124 chr3R 12925374 12925402 copia 8 5278 13.0 10.5 11.8 0.6 5306 chr3R 12920096 intron beat-Vb + chr3R 12922749 intron beat-Vb + chr3R 12925402 intron beat-Vb + chr3R_8_12920001 chr3R_12920001 CanS-SH 2130 chr3R 12931211 12931242 chr3R 12931363 12931394 8 152 6.0 28.0 17.0 0.4 183 chr3R 12931211 intron,3` UTR beat-Vb +,CR44236 - chr3R 12931302 intron,3` UTR beat-Vb +,CR44236 - chr3R 12931394 intron beat-Vb + chr3R_8_12930001 chr3R_12930001 CanS-SH 2131 chr3R 13075300 13075386 chr3R 13075456 13075542 21 156 9.5 6.5 8.0 2.3 242 chr3R 13075300 intron sim + chr3R 13075421 intron sim + chr3R 13075542 intron sim + chr3R_21_13075001 chr3R_13075001 CanS-SH 2132 chr3R 13120754 13120796 chr3R 13120906 13120948 21 152 7.5 13.0 10.2 1.9 194 chr3R 13120754 intron timeout + chr3R 13120851 intron timeout + chr3R 13120948 intron timeout + chr3R_21_13120001 chr3R_13120001 CanS-SH 2133 chr3R 13135761 13135850 chr3R 13138001 13138090 pogo 18 2240 5.5 7.5 6.5 2.4 2329 chr3R 13135761 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136926 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138090 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_18_13135001 chr3R_13135001 CanS-SH 2134 chr3R 13142967 13143010 chr3R 13148618 13148661 mdg3 16 5651 12.0 6.5 9.2 1.6 5694 chr3R 13142967 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145814 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148661 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_16_13145001 chr3R_13145001 CanS-SH 2135 chr3R 13177321 13177353 chr3R 13177646 13177678 5 325 13.5 9.5 11.5 0.4 357 chr3R 13177321 intergenic not near genes chr3R 13177500 intergenic not near genes chr3R 13177678 intergenic not near genes chr3R_5_13175001 chr3R_13175001 CanS-SH 2136 chr3R 13195888 13195972 chr3R 13196058 13196142 18 170 12.5 10.0 11.2 1.5 254 chr3R 13195888 intergenic not near genes chr3R 13196015 intergenic not near genes chr3R 13196142 intergenic not near genes chr3R_18_13195001 chr3R_13195001 CanS-SH 2137 chr3R 13205343 13205421 chr3R 13205499 13205577 17 156 6.5 12.0 9.2 1.7 234 chr3R 13205343 intergenic not near genes chr3R 13205460 intergenic not near genes chr3R 13205577 intergenic not near genes chr3R_17_13205001 chr3R_13205001 CanS-SH 2138 chr3R 13249538 13249562 chr3R 13249726 13249751 7 189 15.5 0.0 7.8 0.8 213 chr3R 13249538 intron Ace - chr3R 13249644 intron Ace - chr3R 13249751 intron Ace - chr3R_7_13245001 chr3R_13245001 CanS-SH 2139 chr3R 13314042 13314066 chr3R 13318906 13318930 Doc 14 4864 11.5 7.5 9.5 1.3 4888 chr3R 13314042 intergenic not near genes chr3R 13316486 intergenic not near genes chr3R 13318930 intergenic CG45080 - chr3R_14_13315001 chr3R_13315001 CanS-SH 2140 chr3R 13356024 13356101 chr3R 13356184 13356261 25 160 11.5 11.0 11.2 2.0 237 chr3R 13356024 intergenic not near genes chr3R 13356142 intergenic not near genes chr3R 13356261 intergenic not near genes chr3R_25_13355001 chr3R_13355001 CanS-SH 2141 chr3R 13364568 13364649 chr3R 13364727 13364817 12 161 7.0 0.0 3.5 2.7 249 chr3R 13364568 intron poly - chr3R 13364692 intron poly - chr3R 13364817 intron poly - chr3R_12_13360001 chr3R_13360001 CanS-SH 2142 chr3R 13391845 13391940 chr3R 13392046 13392141 15 201 7.5 8.5 8.0 1.7 296 chr3R 13391845 intron CCHa2 - chr3R 13391993 intron CCHa2 - chr3R 13392141 intron CCHa2 - chr3R_15_13390001 chr3R_13390001 CanS-SH 2143 chr3R 13450989 13451087 chr3R 13451156 13451254 22 167 4.5 10.0 7.2 2.7 265 chr3R 13450989 intron CG14372 + chr3R 13451122 intron CG14372 + chr3R 13451254 intron CG14372 + chr3R_22_13450001 chr3R_13450001 CanS-SH 2144 chr3R 13477111 13477195 chr3R 13477344 13477428 10 233 9.0 4.0 6.5 1.3 317 chr3R 13477111 intergenic not near genes chr3R 13477270 intergenic not near genes chr3R 13477428 intergenic not near genes chr3R_10_13475001 chr3R_13475001 CanS-SH 2145 chr3R 13496590 13496662 chr3R 13496744 13496816 23 154 9.0 9.5 9.2 2.3 226 chr3R 13496590 intergenic not near genes chr3R 13496703 intergenic not near genes chr3R 13496816 intergenic not near genes chr3R_23_13495001 chr3R_13495001 CanS-SH 2146 chr3R 13557973 13558039 chr3R 13558135 13558201 22 162 8.5 10.0 9.2 2.2 228 chr3R 13557973 intergenic not near genes chr3R 13558087 intergenic not near genes chr3R 13558201 intergenic not near genes chr3R_22_13555001 chr3R_13555001 CanS-SH 2147 chr3R 13598987 13599064 chr3R 13599142 13599219 27 155 8.0 4.5 6.2 3.8 232 chr3R 13598987 intergenic not near genes chr3R 13599103 intergenic not near genes chr3R 13599219 intergenic not near genes chr3R_27_13595001 chr3R_13595001 CanS-SH 2148 chr3R 13602985 13603074 chr3R 13603151 13603240 14 166 5.5 6.5 6.0 2.0 255 chr3R 13602985 intergenic not near genes chr3R 13603112 intergenic not near genes chr3R 13603240 intergenic not near genes chr3R_14_13600001 chr3R_13600001 CanS-SH 2149 chr3R 13606654 13606672 chr3R 13606876 13606894 5 222 14.5 11.5 13.0 0.4 240 chr3R 13606654 intergenic CG9759 - chr3R 13606774 intergenic CG9759 - chr3R 13606894 intergenic CG9759 - chr3R_5_13605001 chr3R_13605001 CanS-SH 2150 chr3R 13625982 13626072 chr3R 13626153 13626243 26 171 7.5 3.5 5.5 4.0 261 chr3R 13625982 intergenic not near genes chr3R 13626112 intergenic not near genes chr3R 13626243 intergenic not near genes chr3R_26_13625001 chr3R_13625001 CanS-SH 2151 chr3R 13627945 13628037 chr3R 13628104 13628199 15 160 8.0 8.5 8.2 1.6 254 chr3R 13627945 intergenic not near genes chr3R 13628072 intergenic not near genes chr3R 13628199 intergenic not near genes chr3R_15_13625001 chr3R_13625001 CanS-SH 2152 chr3R 13659712 13659846 chr3R 13659929 13660009 4 204 0.0 0.0 0.0 4.0 297 chr3R 13659712 intron Hrb87F - chr3R 13659860 intron Hrb87F - chr3R 13660009 intron Hrb87F - chr3R_4_13655001 chr3R_13655001 CanS-SH 2153 chr3R 13692107 13692117 chr3R 13692293 13692303 4 186 13.0 11.5 12.2 0.3 196 chr3R 13692107 3` UTR flfl + chr3R 13692205 3` UTR flfl + chr3R 13692303 3` UTR flfl + chr3R_4_13690001 chr3R_13690001 CanS-SH 2154 chr3R 13719764 13719791 chr3R 13720156 13720183 13 392 12.0 10.0 11.0 1.1 419 chr3R 13719764 intron CG34383 + chr3R 13719974 intron CG34383 + chr3R 13720183 intron CG34383 + chr3R_13_13715001 chr3R_13715001 CanS-SH 2155 chr3R 13790174 13790191 chr3R 13790326 13790343 5 152 13.5 6.0 9.8 0.5 169 chr3R 13790174 intergenic not near genes chr3R 13790258 intergenic not near genes chr3R 13790343 intergenic not near genes chr3R_5_13790001 chr3R_13790001 CanS-SH 2156 chr3R 13803828 13804122 chr3R 13804117 13804275 6 244 0.0 0.0 0.0 6.0 447 chr3R 13803828 intergenic not near genes chr3R 13804052 intergenic not near genes chr3R 13804275 intergenic not near genes chr3R_6_13800001 chr3R_13800001 CanS-SH 2157 chr3R 13828777 13828870 chr3R 13828938 13829031 26 161 9.0 6.0 7.5 3.1 254 chr3R 13828777 intergenic CR43300 + chr3R 13828904 intergenic CR43300 + chr3R 13829031 intergenic not near genes chr3R_26_13825001 chr3R_13825001 CanS-SH 2158 chr3R 13850929 13850951 chr3R 13851081 13851103 9 152 13.5 8.5 11.0 0.8 174 chr3R 13850929 intergenic not near genes chr3R 13851016 intergenic not near genes chr3R 13851103 intergenic not near genes chr3R_9_13850001 chr3R_13850001 CanS-SH 2159 chr3R 13863621 13863693 chr3R 13863784 13863856 24 163 13.0 7.5 10.2 2.1 235 chr3R 13863621 intergenic not near genes chr3R 13863738 intergenic not near genes chr3R 13863856 intergenic not near genes chr3R_24_13860001 chr3R_13860001 CanS-SH 2160 chr3R 7615601 7615601 chr3R 13957372 13957372 6 6341771 31.5 29.5 30.5 0.2 6341771 chr3R 7615601 intron CG34127 - chr3R 10786486 3` UTR Art1 - chr3R 13957372 intergenic not near genes chr3R_6_10785001 chr3R_10785001 CanS-SH 2161 chr3R 14194367 14194406 chr3R 14203591 14203630 roo 10 9224 9.5 6.0 7.8 1.1 9263 chr3R 14194367 intron Dop1R1 - chr3R 14198998 intron Dop1R1 - chr3R 14203630 intron Dop1R1 - chr3R_10_14195001 chr3R_14195001 CanS-SH 2162 chr3R 14522949 14522975 chr3R 14523105 14523131 11 156 12.0 17.5 14.8 0.7 182 chr3R 14522949 intron,exon Pde6 -,Cyp313a1 + chr3R 14523040 intron,3` UTR Pde6 -,Cyp313a1 + chr3R 14523131 intron Pde6 - chr3R_11_14520001 chr3R_14520001 CanS-SH 2163 chr3R 14527331 14527414 chr3R 14527483 14527566 32 152 12.5 12.5 12.5 2.4 235 chr3R 14527331 intron Pde6 - chr3R 14527448 intron Pde6 - chr3R 14527566 intron Pde6 - chr3R_32_14525001 chr3R_14525001 CanS-SH 2164 chr3R 14545994 14546066 chr3R 14546146 14546221 19 153 8.5 8.0 8.2 2.1 227 chr3R 14545994 intron Pde6 - chr3R 14546108 intron Pde6 - chr3R 14546221 intron Pde6 - chr3R_19_14545001 chr3R_14545001 CanS-SH 2165 chr3R 14631988 14632071 chr3R 14632141 14632224 17 153 2.0 7.0 4.5 3.1 236 chr3R 14631988 intron,intron CG7886 -,Cad88C + chr3R 14632106 intron,intron CG7886 -,Cad88C + chr3R 14632224 intron,intron CG7886 -,Cad88C + chr3R_17_14630001 chr3R_14630001 CanS-SH 2166 chr3R 14632617 14632696 chr3R 14632800 14632869 11 182 2.5 4.5 3.5 2.4 252 chr3R 14632617 intron,intron CG7886 -,Cad88C + chr3R 14632743 intron,intron CG7886 -,Cad88C + chr3R 14632869 intron,intron CG7886 -,Cad88C + chr3R_11_14630001 chr3R_14630001 CanS-SH 2167 chr3R 14764524 14764558 chr3R 14764684 14764718 9 160 19.0 8.0 13.5 0.6 194 chr3R 14764524 intron jvl + chr3R 14764621 intron jvl + chr3R 14764718 intron jvl + chr3R_9_14760001 chr3R_14760001 CanS-SH 2168 chr3R 14787057 14787110 chr3R 14787546 14787599 12 489 20.0 4.0 12.0 0.9 542 chr3R 14787057 intron jvl + chr3R 14787328 intron jvl + chr3R 14787599 intron jvl + chr3R_12_14785001 chr3R_14785001 CanS-SH 2169 chr3R 14810444 14810454 chr3R 14810596 14810606 6 152 11.0 7.0 9.0 0.6 162 chr3R 14810444 intron btsz - chr3R 14810525 intron btsz - chr3R 14810606 intron btsz - chr3R_6_14810001 chr3R_14810001 CanS-SH 2170 chr3R 14821556 14821589 chr3R 14821780 14821813 14 224 11.0 11.0 11.0 1.2 257 chr3R 14821556 intron btsz - chr3R 14821684 intron btsz - chr3R 14821813 intron btsz - chr3R_14_14820001 chr3R_14820001 CanS-SH 2171 chr3R 14839742 14839781 chr3R 14840681 14840720 11 939 13.0 4.5 8.8 1.1 978 chr3R 14839742 intron btsz - chr3R 14840231 intron btsz - chr3R 14840720 intron btsz - chr3R_11_14840001 chr3R_14840001 CanS-SH 2172 chr3R 14853298 14853336 chr3R 14853450 14853488 6 152 8.0 4.5 6.2 0.8 190 chr3R 14853298 intron btsz - chr3R 14853393 intron btsz - chr3R 14853488 intron btsz - chr3R_6_14850001 chr3R_14850001 CanS-SH 2173 chr3R 14882458 14882525 chr3R 14882621 14882688 21 163 12.5 9.0 10.8 1.8 230 chr3R 14882458 3` UTR CG3631 + chr3R 14882573 3` UTR,3` UTR CG3631 +,Rrp6 - chr3R 14882688 3` UTR Rrp6 - chr3R_21_14880001 chr3R_14880001 CanS-SH 2174 chr3R 14923661 14923709 chr3R 14923812 14923860 20 151 7.5 14.5 11.0 1.7 199 chr3R 14923661 3` UTR CR45598 - chr3R 14923760 3` UTR CR45598 - chr3R 14923860 intergenic CR45598 - chr3R_20_14920001 chr3R_14920001 CanS-SH 2175 chr3R 14944839 14944871 chr3R 14944995 14945027 7 156 13.5 5.0 9.2 0.7 188 chr3R 14944839 intergenic not near genes chr3R 14944933 intergenic not near genes chr3R 14945027 intergenic not near genes chr3R_7_14940001 chr3R_14940001 CanS-SH 2176 chr3R 15026258 15026324 chr3R 15026419 15026485 22 161 10.5 9.0 9.8 2.0 227 chr3R 15026258 intergenic not near genes chr3R 15026372 intergenic not near genes chr3R 15026485 intergenic not near genes chr3R_22_15025001 chr3R_15025001 CanS-SH 2177 chr3R 15032405 15032463 chr3R 15032568 15032625 4 162 0.0 6.0 3.0 1.0 220 chr3R 15032405 intergenic not near genes chr3R 15032515 intergenic not near genes chr3R 15032625 intergenic not near genes chr3R_4_15030001 chr3R_15030001 CanS-SH 2178 chr3R 15041373 15041399 chr3R 15045216 15045242 Doc 7 3843 12.0 14.5 13.2 0.5 3869 chr3R 15041373 intergenic not near genes chr3R 15043308 intergenic not near genes chr3R 15045242 intergenic not near genes chr3R_7_15040001 chr3R_15040001 CanS-SH 2179 chr3R 15076612 15076670 chr3R 15076771 15076829 20 159 7.5 9.5 8.5 2.1 217 chr3R 15076612 intron dpr9 - chr3R 15076720 intron dpr9 - chr3R 15076829 intron dpr9 - chr3R_20_15075001 chr3R_15075001 CanS-SH 2180 chr3R 15079746 15079786 chr3R 15080062 15080102 pogo 16 316 18.5 9.0 13.8 1.1 356 chr3R 15079746 3` UTR CG6966 - chr3R 15079924 3` UTR CG6966 - chr3R 15080102 3` UTR CG6966 - chr3R_16_15075001 chr3R_15075001 CanS-SH 2181 chr3R 15084080 15084164 chr3R 15084287 15084371 15 207 2.5 5.0 3.8 3.1 291 chr3R 15084080 intron CG6966 - chr3R 15084226 intron CG6966 - chr3R 15084371 intron CG6966 - chr3R_15_15080001 chr3R_15080001 CanS-SH 2182 chr3R 15102430 15102466 chr3R 15109762 15109798 412 17 7332 13.5 8.5 11.0 1.4 7368 chr3R 15102430 intron CG42788 - chr3R 15106114 intron CG42788 - chr3R 15109798 intron CG42788 - chr3R_17_15105001 chr3R_15105001 CanS-SH 2183 chr3R 15132012 15132035 chr3R 15135147 15135170 Juan 7 3135 14.0 13.5 13.8 0.5 3158 chr3R 15132012 intergenic CG42788 - chr3R 15133591 intergenic not near genes chr3R 15135170 3` UTR CG6912 - chr3R_7_15130001 chr3R_15130001 CanS-SH 2184 chr3R 15162482 15162526 chr3R 15167325 15167369 F-element 5 4843 16.0 8.0 12.0 0.4 4887 chr3R 15162482 intron Gyc88E + chr3R 15164926 intron Gyc88E + chr3R 15167369 intron Gyc88E + chr3R_5_15160001 chr3R_15160001 CanS-SH 2185 chr3R 15759215 15759220 chr3R 15759369 15759374 4 154 9.5 6.5 8.0 0.4 159 chr3R 15759215 intergenic not near genes chr3R 15759294 intergenic not near genes chr3R 15759374 intergenic not near genes chr3R_4_15755001 chr3R_15755001 CanS-SH 2186 chr3R 15867457 15867551 chr3R 15867628 15867711 9 161 7.0 0.0 3.5 2.0 254 chr3R 15867457 intron CG31183 - chr3R 15867584 intron CG31183 - chr3R 15867711 intron CG31183 - chr3R_9_15865001 chr3R_15865001 CanS-SH 2187 chr3R 15878024 15878096 chr3R 15878187 15878259 13 163 5.0 7.0 6.0 1.9 235 chr3R 15878024 intergenic not near genes chr3R 15878142 intergenic not near genes chr3R 15878259 intergenic not near genes chr3R_13_15875001 chr3R_15875001 CanS-SH 2188 chr3R 15912477 15912502 chr3R 15912665 15912690 4 188 21.0 6.5 13.8 0.3 213 chr3R 15912477 intron CG45105 - chr3R 15912584 intron CG45105 - chr3R 15912690 3` UTR CG45105 - chr3R_4_15910001 chr3R_15910001 CanS-SH 2189 chr3R 16013063 16013140 chr3R 16013226 16013303 26 163 10.5 10.0 10.2 2.3 240 chr3R 16013063 intron GATAe + chr3R 16013183 intron GATAe + chr3R 16013303 intron GATAe + chr3R_26_16010001 chr3R_16010001 CanS-SH 2190 chr3R 16033352 16033429 chr3R 16033508 16033585 18 156 5.0 6.0 5.5 2.8 233 chr3R 16033352 intron pnr + chr3R 16033468 intron pnr + chr3R 16033585 intron pnr + chr3R_18_16030001 chr3R_16030001 CanS-SH 2191 chr3R 16246453 16246545 chr3R 16246604 16246696 19 151 7.5 6.0 6.8 2.4 243 chr3R 16246453 intron tara + chr3R 16246574 intron tara + chr3R 16246696 intron tara + chr3R_19_16245001 chr3R_16245001 CanS-SH 2192 chr3R 16364612 16364623 chr3R 16364764 16364775 7 152 18.5 1.0 9.8 0.6 163 chr3R 16364612 intron CG14880 - chr3R 16364694 intron CG14880 - chr3R 16364775 intron CG14880 - chr3R_7_16360001 chr3R_16360001 CanS-SH 2193 chr3R 16374236 16374282 chr3R 16374428 16374474 14 192 19.5 12.5 16.0 0.8 238 chr3R 16374236 intergenic ss - chr3R 16374355 intergenic ss - chr3R 16374474 3` UTR ss - chr3R_14_16370001 chr3R_16370001 CanS-SH 2194 chr3R 16499472 16499513 chr3R 16499628 16499669 12 156 5.5 7.5 6.5 1.6 197 chr3R 16499472 intron decay - chr3R 16499570 intron decay - chr3R 16499669 intron decay - chr3R_12_16495001 chr3R_16495001 CanS-SH 2195 chr3R 16534388 16534454 chr3R 16534551 16534617 20 163 7.0 6.5 6.8 2.6 229 chr3R 16534388 intron CG42342 + chr3R 16534502 intron CG42342 + chr3R 16534617 intron CG42342 + chr3R_20_16530001 chr3R_16530001 CanS-SH 2196 chr3R 16633631 16633673 chr3R 16633805 16633848 10 174 18.5 19.0 18.8 0.5 217 chr3R 16633631 intron Fas1 + chr3R 16633740 intron Fas1 + chr3R 16633848 intron Fas1 + chr3R_10_16630001 chr3R_16630001 CanS-SH 2197 chr3R 16731860 16731945 chr3R 16732016 16732100 17 156 4.5 4.5 4.5 3.1 240 chr3R 16731860 intron Ubx - chr3R 16731980 intron Ubx - chr3R 16732100 intron Ubx - chr3R_17_16730001 chr3R_16730001 CanS-SH 2198 chr3R 16756257 16756299 chr3R 16762523 16762565 diver 15 6266 15.0 4.5 9.8 1.4 6308 chr3R 16756257 intron bxd - chr3R 16759411 intron bxd - chr3R 16762565 intron bxd - chr3R_15_16755001 chr3R_16755001 CanS-SH 2199 chr3R 16774135 16774185 chr3R 16774316 16774366 24 181 14.5 6.5 10.5 2.1 231 chr3R 16774135 intergenic not near genes chr3R 16774250 intergenic not near genes chr3R 16774366 intergenic not near genes chr3R_24_16770001 chr3R_16770001 CanS-SH 2200 chr3R 16845091 16845098 chr3R 16845254 16845261 5 163 17.5 4.5 11.0 0.4 170 chr3R 16845091 intron iab-8 - chr3R 16845176 intron iab-8 - chr3R 16845261 intron iab-8 - chr3R_5_16845001 chr3R_16845001 CanS-SH 2201 chr3R 9313882 9313884 chr3R 16845152 16845153 4 7531269 39.0 13.5 26.2 0.1 7531271 chr3R 9313882 intron CG8861 - chr3R 13079518 intergenic not near genes chr3R 16845153 intron iab-8 - chr3R_4_13075001 chr3R_13075001 CanS-SH 2202 chr3R 16849651 16849705 chr3R 16849829 16849883 21 178 9.5 9.0 9.2 2.1 232 chr3R 16849651 intron iab-8 - chr3R 16849767 intron iab-8 - chr3R 16849883 intron iab-8 - chr3R_21_16845001 chr3R_16845001 CanS-SH 2203 chr3R 16860268 16860360 chr3R 16860421 16860511 16 153 5.5 0.0 2.8 4.2 243 chr3R 16860268 intron iab-8 - chr3R 16860390 intron iab-8 - chr3R 16860511 intron iab-8 - chr3R_16_16860001 chr3R_16860001 CanS-SH 2204 chr3R 16889894 16889930 chr3R 16890046 16890082 10 152 11.5 9.0 10.2 0.9 188 chr3R 16889894 intron iab-8 - chr3R 16889988 intron iab-8 - chr3R 16890082 3` UTR iab-8 - chr3R_10_16885001 chr3R_16885001 CanS-SH 2205 chr3R 16907043 16907119 chr3R 16907207 16907283 20 164 9.5 9.5 9.5 1.9 240 chr3R 16907043 intron iab-8 - chr3R 16907163 intron iab-8 - chr3R 16907283 intron iab-8 - chr3R_20_16905001 chr3R_16905001 CanS-SH 2206 chr3R 16957283 16957308 chr3R 16957443 16957467 7 160 12.0 13.0 12.5 0.5 184 chr3R 16957283 intron Abd-B - chr3R 16957375 intron Abd-B - chr3R 16957467 intron Abd-B - chr3R_7_16955001 chr3R_16955001 CanS-SH 2207 chr3R 17003623 17003654 chr3R 17003936 17003967 14 313 11.5 9.0 10.2 1.2 344 chr3R 17003623 intron Irc + chr3R 17003795 intron Irc + chr3R 17003967 intron Irc + chr3R_14_17000001 chr3R_17000001 CanS-SH 2208 chr3R 17023938 17023946 chr3R 17024166 17024174 4 228 11.0 0.0 5.5 0.6 236 chr3R 17023938 intron Pxd + chr3R 17024056 intron Pxd + chr3R 17024174 intron Pxd + chr3R_4_17020001 chr3R_17020001 CanS-SH 2209 chr3R 17027657 17027689 chr3R 17030932 17030964 9 3275 42.5 43.0 42.8 0.2 3307 chr3R 17027657 exon Pxd + chr3R 17029310 exon CG5225 + chr3R 17030964 intergenic CG5225 + chr3R_9_17025001 chr3R_17025001 CanS-SH 2210 chr3R 17101068 17101188 chr3R 17101223 17101341 14 155 0.0 0.0 0.0 14.0 273 chr3R 17101068 exon cher - chr3R 17101204 intron cher - chr3R 17101341 intron cher - chr3R_14_17100001 chr3R_17100001 CanS-SH 2211 chr3R 17147871 17147965 chr3R 17148026 17148120 11 155 5.0 3.0 4.0 2.2 249 chr3R 17147871 intron m-cup - chr3R 17147996 intron m-cup - chr3R 17148120 intron m-cup - chr3R_11_17145001 chr3R_17145001 CanS-SH 2212 chr3R 17176214 17176223 chr3R 17176375 17176384 5 161 22.5 7.0 14.8 0.3 170 chr3R 17176214 intron Mur89F - chr3R 17176299 intron Mur89F - chr3R 17176384 intron Mur89F - chr3R_5_17175001 chr3R_17175001 CanS-SH 2213 chr3R 17184520 17184701 chr3R 17184693 17184852 18 172 0.0 0.0 0.0 18.0 332 chr3R 17184520 intron Mur89F - chr3R 17184686 intron Mur89F - chr3R 17184852 intron Mur89F - chr3R_18_17180001 chr3R_17180001 CanS-SH 2214 chr3R 17209645 17209695 chr3R 17209808 17209858 16 163 14.0 18.0 16.0 0.9 213 chr3R 17209645 intergenic not near genes chr3R 17209752 intergenic not near genes chr3R 17209858 intergenic not near genes chr3R_16_17205001 chr3R_17205001 CanS-SH 2215 chr3R 17260627 17260659 chr3R 17260778 17260810 11 151 5.5 6.0 5.8 1.6 183 chr3R 17260627 intron beat-IIb - chr3R 17260718 intron beat-IIb - chr3R 17260810 intron beat-IIb - chr3R_11_17260001 chr3R_17260001 CanS-SH 2216 chr3R 17283129 17283142 chr3R 17283309 17283322 4 180 13.0 8.0 10.5 0.3 193 chr3R 17283129 intergenic not near genes chr3R 17283226 intergenic not near genes chr3R 17283322 intergenic CG31418 + chr3R_4_17280001 chr3R_17280001 CanS-SH 2217 chr3R 17294609 17294642 chr3R 17295112 17295145 BS 10 503 15.0 10.0 12.5 0.7 536 chr3R 17294609 intergenic not near genes chr3R 17294877 intergenic not near genes chr3R 17295145 intergenic not near genes chr3R_10_17290001 chr3R_17290001 CanS-SH 2218 chr3R 17452489 17452520 chr3R 17452764 17452795 10 275 14.0 7.0 10.5 0.9 306 chr3R 17452489 intergenic not near genes chr3R 17452642 intergenic not near genes chr3R 17452795 intergenic not near genes chr3R_10_17450001 chr3R_17450001 CanS-SH 2219 chr3R 17461137 17461213 chr3R 17461294 17461370 24 157 12.5 8.0 10.2 2.1 233 chr3R 17461137 intergenic not near genes chr3R 17461254 intergenic not near genes chr3R 17461370 intergenic not near genes chr3R_24_17460001 chr3R_17460001 CanS-SH 2220 chr3R 17467538 17467622 chr3R 17467724 17467808 14 186 3.5 6.5 5.0 2.3 270 chr3R 17467538 intergenic not near genes chr3R 17467673 intergenic not near genes chr3R 17467808 intergenic not near genes chr3R_14_17465001 chr3R_17465001 CanS-SH 2221 chr3R 17586652 17586738 chr3R 17586832 17586918 14 180 6.0 10.5 8.2 1.5 266 chr3R 17586652 intergenic not near genes chr3R 17586785 intergenic not near genes chr3R 17586918 intergenic not near genes chr3R_14_17585001 chr3R_17585001 CanS-SH 2222 chr3R 17591230 17591264 chr3R 17591741 17591774 F-element 15 511 15.5 10.5 13.0 1.1 544 chr3R 17591230 intergenic not near genes chr3R 17591502 intergenic not near genes chr3R 17591774 intergenic not near genes chr3R_15_17590001 chr3R_17590001 CanS-SH 2223 chr3R 17653019 17653111 chr3R 17653184 17653275 24 165 2.5 0.0 1.2 10.9 256 chr3R 17653019 intron,intron CG14322 +,CR45223 - chr3R 17653147 intron,intron CG14322 +,CR45223 - chr3R 17653275 intron,intron CG14322 +,CR45223 - chr3R_24_17650001 chr3R_17650001 CanS-SH 2224 chr3R 17725000 17725009 chr3R 17725169 17725178 4 169 19.5 0.0 9.8 0.4 178 chr3R 17725000 5` UTR Atg8b - chr3R 17725089 intergenic Atg8b - chr3R 17725178 intergenic Atg8b - chr3R_4_17725001 chr3R_17725001 CanS-SH 2225 chr3R 17734050 17734129 chr3R 17734214 17734293 25 164 4.5 8.5 6.5 3.3 243 chr3R 17734050 exon CG14321 + chr3R 17734172 3` UTR CG14321 + chr3R 17734293 3` UTR CG14321 + chr3R_25_17730001 chr3R_17730001 CanS-SH 2226 chr3R 17734787 17734816 chr3R 17734976 17735005 5 189 0.0 0.0 0.0 5.0 218 chr3R 17734787 intergenic CG14321 + chr3R 17734896 intergenic not near genes chr3R 17735005 intergenic not near genes chr3R_5_17730001 chr3R_17730001 CanS-SH 2227 chr3R 17758157 17758241 chr3R 17758316 17758400 21 159 13.0 8.5 10.8 1.8 243 chr3R 17758157 intron TyrR - chr3R 17758278 intron TyrR - chr3R 17758400 intron TyrR - chr3R_21_17755001 chr3R_17755001 CanS-SH 2228 chr3R 17925799 17925824 chr3R 17927341 17927366 hobo 4 1542 7.0 7.0 7.0 0.5 1567 chr3R 17925799 intron cpo + chr3R 17926582 intron cpo + chr3R 17927366 intron cpo + chr3R_4_17925001 chr3R_17925001 CanS-SH 2229 chr3R 18032705 18032804 chr3R 18040453 18040552 opus 16 7748 3.0 6.0 4.5 2.9 7847 chr3R 18032705 intergenic not near genes chr3R 18036628 intergenic not near genes chr3R 18040552 intergenic not near genes chr3R_16_18035001 chr3R_18035001 CanS-SH 2230 chr3R 18041680 18041777 chr3R 18041832 18041936 17 155 0.5 2.5 1.5 6.8 256 chr3R 18041680 intergenic not near genes chr3R 18041808 intergenic not near genes chr3R 18041936 intergenic not near genes chr3R_17_18040001 chr3R_18040001 CanS-SH 2231 chr3R 18061528 18061557 chr3R 18063171 18063200 F-element 5 1643 14.0 14.5 14.2 0.3 1672 chr3R 18061528 intergenic not near genes chr3R 18062364 intergenic not near genes chr3R 18063200 intergenic not near genes chr3R_5_18060001 chr3R_18060001 CanS-SH 2232 chr3R 18067903 18068014 chr3R 18068074 18068171 23 165 0.0 5.5 2.8 6.1 268 chr3R 18067903 intergenic not near genes chr3R 18068037 intergenic not near genes chr3R 18068171 intergenic not near genes chr3R_23_18065001 chr3R_18065001 CanS-SH 2233 chr3R 18098278 18098288 chr3R 18098430 18098440 4 152 8.0 19.0 13.5 0.3 162 chr3R 18098278 intron sr + chr3R 18098359 intron sr + chr3R 18098440 intron sr + chr3R_4_18095001 chr3R_18095001 CanS-SH 2234 chr3R 18119670 18119744 chr3R 18119822 18119896 18 152 0.0 4.0 2.0 6.0 226 chr3R 18119670 intron sr + chr3R 18119783 intron sr + chr3R 18119896 intron sr + chr3R_18_18115001 chr3R_18115001 CanS-SH 2235 chr3R 18299272 18299357 chr3R 18302565 18302650 9 3293 37.0 53.5 45.2 0.2 3378 chr3R 18299272 5` UTR Dlc90F + chr3R 18300961 exon CG18600 - chr3R 18302650 exon CG7126 - chr3R_9_18300001 chr3R_18300001 CanS-SH 2236 chr3R 18320986 18321001 chr3R 18321248 18321263 7 262 5.0 16.5 10.8 0.6 277 chr3R 18320986 intron CG31235 - chr3R 18321124 intron CG31235 - chr3R 18321263 intron CG31235 - chr3R_7_18320001 chr3R_18320001 CanS-SH 2237 chr3R 18346324 18346390 chr3R 18346519 18346595 7 196 4.0 1.5 2.8 1.8 271 chr3R 18346324 intron CG15803 - chr3R 18346460 intron CG15803 - chr3R 18346595 intron CG15803 - chr3R_7_18345001 chr3R_18345001 CanS-SH 2238 chr3R 18373684 18373773 chr3R 18373941 18374031 11 257 7.5 6.0 6.8 1.4 347 chr3R 18373684 intergenic CG14310 + chr3R 18373858 intergenic not near genes chr3R 18374031 intergenic not near genes chr3R_11_18370001 chr3R_18370001 CanS-SH 2239 chr3R 18419459 18419516 chr3R 18419623 18419680 21 164 10.0 13.0 11.5 1.7 221 chr3R 18419459 intron fru - chr3R 18419570 intron fru - chr3R 18419680 intron fru - chr3R_21_18415001 chr3R_18415001 CanS-SH 2240 chr3R 18472208 18472290 chr3R 18472385 18472466 29 176 5.0 5.0 5.0 4.8 258 chr3R 18472208 intron fru - chr3R 18472337 intron fru - chr3R 18472466 intron fru - chr3R_29_18470001 chr3R_18470001 CanS-SH 2241 chr3R 18473160 18473258 chr3R 18473322 18473420 15 162 5.5 5.0 5.2 2.4 260 chr3R 18473160 intron fru - chr3R 18473290 intron fru - chr3R 18473420 intron fru - chr3R_15_18470001 chr3R_18470001 CanS-SH 2242 chr3R 18481133 18481210 chr3R 18481297 18481369 9 163 0.0 4.5 2.2 2.8 236 chr3R 18481133 intron fru - chr3R 18481251 intron fru - chr3R 18481369 intron fru - chr3R_9_18480001 chr3R_18480001 CanS-SH 2243 chr3R 18485255 18485351 chr3R 18485430 18485526 12 175 6.0 6.5 6.2 1.7 271 chr3R 18485255 intron fru - chr3R 18485390 intron fru - chr3R 18485526 intron fru - chr3R_12_18485001 chr3R_18485001 CanS-SH 2244 chr3R 18501538 18501610 chr3R 18501694 18501766 20 156 5.0 10.0 7.5 2.4 228 chr3R 18501538 intron fru - chr3R 18501652 intron fru - chr3R 18501766 intron fru - chr3R_20_18500001 chr3R_18500001 CanS-SH 2245 chr3R 18567526 18567593 chr3R 18567693 18567760 18 167 8.0 4.5 6.2 2.5 234 chr3R 18567526 intergenic not near genes chr3R 18567643 intergenic not near genes chr3R 18567760 intergenic not near genes chr3R_18_18565001 chr3R_18565001 CanS-SH 2246 chr3R 18606441 18606479 chr3R 18610748 18610786 F-element 16 4307 10.5 10.5 10.5 1.4 4345 chr3R 18606441 intron,intron qin +,CG14304 - chr3R 18608614 intron,intron qin +,CG14304 - chr3R 18610786 intron,intron qin +,CG14304 - chr3R_16_18605001 chr3R_18605001 CanS-SH 2247 chr3R 18617646 18617724 chr3R 18617801 18617879 14 155 9.0 8.5 8.8 1.4 233 chr3R 18617646 intron,intron qin +,CG14304 - chr3R 18617762 intron,intron qin +,CG14304 - chr3R 18617879 intron,intron qin +,CG14304 - chr3R_14_18615001 chr3R_18615001 CanS-SH 2248 chr3R 18649875 18649939 chr3R 18650031 18650095 19 156 11.0 8.5 9.8 1.8 220 chr3R 18649875 3` UTR qin + chr3R 18649985 3` UTR qin + chr3R 18650095 3` UTR qin + chr3R_19_18645001 chr3R_18645001 CanS-SH 2249 chr3R 18670323 18670403 chr3R 18670491 18670572 25 168 4.5 9.0 6.8 3.2 249 chr3R 18670323 intron CG7702 + chr3R 18670448 intron CG7702 + chr3R 18670572 intron CG7702 + chr3R_25_18670001 chr3R_18670001 CanS-SH 2250 chr3R 18729966 18730030 chr3R 18730117 18730181 16 151 8.0 11.5 9.8 1.5 215 chr3R 18729966 exon Cha + chr3R 18730074 intron Cha + chr3R 18730181 exon Cha + chr3R_16_18730001 chr3R_18730001 CanS-SH 2251 chr3R 18781627 18781673 chr3R 18781778 18781824 9 151 13.0 0.5 6.8 1.2 197 chr3R 18781627 intron CG7720 - chr3R 18781726 intron CG7720 - chr3R 18781824 intron CG7720 - chr3R_9_18780001 chr3R_18780001 CanS-SH 2252 chr3R 18792731 18792822 chr3R 18792888 18792980 15 157 7.0 0.0 3.5 3.3 249 chr3R 18792731 intron CG7720 - chr3R 18792856 intron CG7720 - chr3R 18792980 intron CG7720 - chr3R_15_18790001 chr3R_18790001 CanS-SH 2253 chr3R 18812003 18812038 chr3R 18812156 18812191 10 153 12.0 8.0 10.0 0.9 188 chr3R 18812003 intron CG18208 - chr3R 18812097 intron CG18208 - chr3R 18812191 intron CG18208 - chr3R_10_18810001 chr3R_18810001 CanS-SH 2254 chr3R 18863088 18863158 chr3R 18863250 18863319 10 162 7.5 7.0 7.2 1.2 231 chr3R 18863088 intergenic not near genes chr3R 18863204 intergenic not near genes chr3R 18863319 intergenic not near genes chr3R_10_18860001 chr3R_18860001 CanS-SH 2255 chr3R 18876079 18876108 chr3R 18876415 18876444 9 336 11.0 0.0 5.5 1.4 365 chr3R 18876079 intron CG14298 + chr3R 18876262 intron CG14298 + chr3R 18876444 intron CG14298 + chr3R_9_18875001 chr3R_18875001 CanS-SH 2256 chr3R 18932489 18932528 chr3R 18932739 18932778 11 250 14.5 6.5 10.5 1.0 289 chr3R 18932489 intron CG42613 + chr3R 18932634 intron CG42613 + chr3R 18932778 intron CG42613 + chr3R_11_18930001 chr3R_18930001 CanS-SH 2257 chr3R 18933736 18933802 chr3R 18933891 18933957 21 155 10.0 7.5 8.8 2.1 221 chr3R 18933736 intron CG42613 + chr3R 18933846 intron CG42613 + chr3R 18933957 intron CG42613 + chr3R_21_18930001 chr3R_18930001 CanS-SH 2258 chr3R 18941583 18941663 chr3R 18941794 18941874 15 211 6.5 6.5 6.5 2.0 291 chr3R 18941583 intron CG42613 + chr3R 18941728 intron CG42613 + chr3R 18941874 intron CG42613 + chr3R_15_18940001 chr3R_18940001 CanS-SH 2259 chr3R 19053588 19053600 chr3R 19053757 19053769 6 169 18.5 5.0 11.8 0.5 181 chr3R 19053588 intron cdi - chr3R 19053678 intron cdi - chr3R 19053769 intron cdi - chr3R_6_19050001 chr3R_19050001 CanS-SH 2260 chr3R 19128827 19128832 chr3R 19129019 19129024 5 192 0.0 9.5 4.8 0.9 197 chr3R 19128827 intron CG6040 + chr3R 19128926 intron CG6040 + chr3R 19129024 intron CG6040 + chr3R_5_19125001 chr3R_19125001 CanS-SH 2261 chr3R 19208623 19208662 chr3R 19208785 19208824 15 162 5.0 0.0 2.5 4.3 201 chr3R 19208623 intergenic not near genes chr3R 19208724 intergenic not near genes chr3R 19208824 intergenic not near genes chr3R_15_19205001 chr3R_19205001 CanS-SH 2262 chr3R 19271347 19271438 chr3R 19271507 19271598 21 160 7.0 7.0 7.0 2.6 251 chr3R 19271347 intergenic not near genes chr3R 19271472 intergenic not near genes chr3R 19271598 intergenic not near genes chr3R_21_19270001 chr3R_19270001 CanS-SH 2263 chr3R 19337135 19337176 chr3R 19337296 19337337 13 161 5.5 8.0 6.8 1.7 202 chr3R 19337135 intergenic not near genes chr3R 19337236 intergenic not near genes chr3R 19337337 intergenic not near genes chr3R_13_19335001 chr3R_19335001 CanS-SH 2264 chr3R 19344601 19344698 chr3R 19344811 19344908 14 210 7.0 4.0 5.5 2.2 307 chr3R 19344601 intergenic not near genes chr3R 19344754 intergenic not near genes chr3R 19344908 intergenic not near genes chr3R_14_19340001 chr3R_19340001 CanS-SH 2265 chr3R 19364360 19364450 chr3R 19364585 19364675 19 225 4.0 8.0 6.0 2.7 315 chr3R 19364360 intergenic not near genes chr3R 19364518 intergenic not near genes chr3R 19364675 intergenic not near genes chr3R_19_19360001 chr3R_19360001 CanS-SH 2266 chr3R 19418350 19418437 chr3R 19418517 19418615 26 169 8.5 0.0 4.2 5.0 265 chr3R 19418350 intron CG31221 + chr3R 19418482 intron CG31221 + chr3R 19418615 intron CG31221 + chr3R_26_19415001 chr3R_19415001 CanS-SH 2267 chr3R 19429672 19429738 chr3R 19429836 19429902 16 164 6.5 7.0 6.8 2.1 230 chr3R 19429672 intron CG31221 + chr3R 19429787 intron CG31221 + chr3R 19429902 intron CG31221 + chr3R_16_19425001 chr3R_19425001 CanS-SH 2268 chr3R 19431426 19431498 chr3R 19431587 19431657 17 161 7.5 3.5 5.5 2.6 231 chr3R 19431426 intron CG31221 + chr3R 19431542 intron CG31221 + chr3R 19431657 intron CG31221 + chr3R_17_19430001 chr3R_19430001 CanS-SH 2269 chr3R 19524592 19524629 chr3R 19524747 19524784 19 155 12.5 13.0 12.8 1.4 192 chr3R 19524592 intron Dys + chr3R 19524688 intron Dys + chr3R 19524784 intron Dys + chr3R_19_19520001 chr3R_19520001 CanS-SH 2270 chr3R 19595825 19595894 chr3R 19595987 19596056 21 162 8.5 8.5 8.5 2.2 231 chr3R 19595825 3` UTR Dys + chr3R 19595940 3` UTR Dys + chr3R 19596056 3` UTR Dys + chr3R_21_19595001 chr3R_19595001 CanS-SH 2271 chr3R 19600224 19600259 chr3R 19600378 19600413 10 154 5.5 20.0 12.8 0.7 189 chr3R 19600224 intergenic CG7333 + chr3R 19600318 intergenic CG7333 + chr3R 19600413 intergenic CG7333 + chr3R_10_19600001 chr3R_19600001 CanS-SH 2272 chr3R 19602685 19602787 chr3R 19602838 19602940 14 153 7.0 7.0 7.0 1.8 255 chr3R 19602685 intergenic CG7333 + chr3R 19602812 intergenic CG7333 + chr3R 19602940 intergenic CG7333 +,CG7342 + chr3R_14_19600001 chr3R_19600001 CanS-SH 2273 chr3R 19622918 19622944 chr3R 19623095 19623121 7 177 9.0 10.0 9.5 0.7 203 chr3R 19622918 intron CG6231 - chr3R 19623020 intron CG6231 - chr3R 19623121 intron CG6231 - chr3R_7_19620001 chr3R_19620001 CanS-SH 2274 chr3R 19633266 19633317 chr3R 19633423 19633474 14 157 0.5 16.5 8.5 1.5 208 chr3R 19633266 intergenic subdued - chr3R 19633370 intergenic subdued - chr3R 19633474 3` UTR subdued - chr3R_14_19630001 chr3R_19630001 CanS-SH 2275 chr3R 19702262 19702336 chr3R 19702419 19702493 26 157 11.5 8.5 10.0 2.4 231 chr3R 19702262 intergenic not near genes chr3R 19702378 intergenic not near genes chr3R 19702493 intergenic not near genes chr3R_26_19700001 chr3R_19700001 CanS-SH 2276 chr3R 19744182 19744204 chr3R 19749503 19749524 Rt1a 7 5321 9.5 13.0 11.2 0.6 5342 chr3R 19744182 intron,intron GluClalpha +,CR43488 - chr3R 19746853 intron GluClalpha + chr3R 19749524 intron GluClalpha + chr3R_7_19745001 chr3R_19745001 CanS-SH 2277 chr3R 19830814 19830883 chr3R 19830966 19831035 10 152 2.5 9.0 5.8 1.5 221 chr3R 19830814 intron bnl - chr3R 19830924 intron bnl - chr3R 19831035 intron bnl - chr3R_10_19830001 chr3R_19830001 CanS-SH 2278 chr3R 19839467 19839504 chr3R 19839774 19839811 11 307 13.0 9.0 11.0 0.9 344 chr3R 19839467 intergenic not near genes chr3R 19839639 intergenic not near genes chr3R 19839811 intergenic not near genes chr3R_11_19835001 chr3R_19835001 CanS-SH 2279 chr3R 19846898 19846992 chr3R 19847133 19847228 9 235 6.0 7.5 6.8 1.2 330 chr3R 19846898 intergenic CG4662 + chr3R 19847063 intergenic CG4662 + chr3R 19847228 intergenic CG4662 + chr3R_9_19845001 chr3R_19845001 CanS-SH 2280 chr3R 19945902 19946000 chr3R 19946080 19946179 19 178 3.5 11.0 7.2 2.3 277 chr3R 19945902 intron Hs6st - chr3R 19946040 intron Hs6st - chr3R 19946179 intron Hs6st - chr3R_19_19945001 chr3R_19945001 CanS-SH 2281 chr3R 19955315 19955371 chr3R 19955491 19955547 9 176 0.0 13.0 6.5 1.2 232 chr3R 19955315 intron Hs6st - chr3R 19955431 intron Hs6st - chr3R 19955547 intron Hs6st - chr3R_9_19955001 chr3R_19955001 CanS-SH 2282 chr3R 20060572 20060643 chr3R 20060730 20060801 29 158 10.5 7.0 8.8 3.0 229 chr3R 20060572 intergenic not near genes chr3R 20060686 intergenic not near genes chr3R 20060801 intergenic not near genes chr3R_29_20060001 chr3R_20060001 CanS-SH 2283 chr3R 20065427 20065502 chr3R 20065587 20065662 17 160 8.5 5.0 6.8 2.2 235 chr3R 20065427 intergenic not near genes chr3R 20065544 intergenic not near genes chr3R 20065662 intergenic not near genes chr3R_17_20065001 chr3R_20065001 CanS-SH 2284 chr3R 20076973 20077049 chr3R 20077134 20077210 29 161 7.5 11.5 9.5 2.8 237 chr3R 20076973 intergenic not near genes chr3R 20077092 intergenic not near genes chr3R 20077210 intergenic not near genes chr3R_29_20075001 chr3R_20075001 CanS-SH 2285 chr3R 20102734 20102773 chr3R 20102955 20102994 6 221 11.5 12.0 11.8 0.5 260 chr3R 20102734 intergenic not near genes chr3R 20102864 intergenic not near genes chr3R 20102994 intergenic not near genes chr3R_6_20100001 chr3R_20100001 CanS-SH 2286 chr3R 20109484 20109512 chr3R 20114765 20114793 copia 10 5281 14.5 14.0 14.2 0.7 5309 chr3R 20109484 intergenic not near genes chr3R 20112138 intergenic not near genes chr3R 20114793 intergenic CG10887 + chr3R_10_20110001 chr3R_20110001 CanS-SH 2287 chr3R 20140122 20140182 chr3R 20140291 20140351 16 169 11.0 8.0 9.5 1.5 229 chr3R 20140122 intergenic CR42836 - chr3R 20140236 intergenic CR42836 - chr3R 20140351 intergenic CR42836 - chr3R_16_20140001 chr3R_20140001 CanS-SH 2288 chr3R 20156636 20156666 chr3R 20165881 20165911 roo 11 9245 14.0 7.0 10.5 1.0 9275 chr3R 20156636 intergenic not near genes chr3R 20161274 intergenic not near genes chr3R 20165911 intergenic not near genes chr3R_11_20160001 chr3R_20160001 CanS-SH 2289 chr3R 20194781 20194803 chr3R 20196944 20196966 8 2163 16.0 32.0 24.0 0.3 2185 chr3R 20194781 intergenic not near genes chr3R 20195874 intergenic not near genes chr3R 20196966 intergenic not near genes chr3R_8_20195001 chr3R_20195001 CanS-SH 2290 chr3R 20195168 20195239 chr3R 20195329 20195396 7 159 9.5 11.5 10.5 0.6 228 chr3R 20195168 intergenic not near genes chr3R 20195282 intergenic not near genes chr3R 20195396 intergenic not near genes chr3R_7_20195001 chr3R_20195001 CanS-SH 2291 chr3R 20194571 20194576 chr3R 20197779 20197784 5 3208 19.5 47.0 33.2 0.1 3213 chr3R 20194571 intergenic not near genes chr3R 20196178 intergenic not near genes chr3R 20197784 intergenic not near genes chr3R_5_20195001 chr3R_20195001 CanS-SH 2292 chr3R 20205506 20205589 chr3R 20205703 20205786 19 197 9.5 10.5 10.0 1.7 280 chr3R 20205506 intron Nlg4 + chr3R 20205646 intron Nlg4 + chr3R 20205786 intron Nlg4 + chr3R_19_20205001 chr3R_20205001 CanS-SH 2293 chr3R 20205862 20205937 chr3R 20206021 20206101 5 160 2.0 6.5 4.2 1.0 239 chr3R 20205862 intron Nlg4 + chr3R 20205982 intron Nlg4 + chr3R 20206101 intron Nlg4 + chr3R_5_20205001 chr3R_20205001 CanS-SH 2294 chr3R 20209742 20209765 chr3R 20209903 20209926 11 161 15.0 11.5 13.2 0.8 184 chr3R 20209742 intron,5` UTR Nlg4 +,CG17199 - chr3R 20209834 intron Nlg4 + chr3R 20209926 intron Nlg4 + chr3R_11_20205001 chr3R_20205001 CanS-SH 2295 chr3R 20209767 20209815 chr3R 20209928 20209976 17 161 8.0 17.0 12.5 1.3 209 chr3R 20209767 intron,5` UTR Nlg4 +,CG17199 - chr3R 20209872 intron Nlg4 + chr3R 20209976 intron Nlg4 + chr3R_17_20205001 chr3R_20205001 CanS-SH 2296 chr3R 20252143 20252248 chr3R 20252296 20252401 26 153 0.0 0.0 0.0 26.0 258 chr3R 20252143 intergenic not near genes chr3R 20252272 intergenic cic + chr3R 20252401 intergenic cic + chr3R_26_20250001 chr3R_20250001 CanS-SH 2297 chr3R 20256765 20256816 chr3R 20256916 20256967 18 151 8.0 9.0 8.5 1.9 202 chr3R 20256765 intron cic + chr3R 20256866 intron cic + chr3R 20256967 intron cic + chr3R_18_20255001 chr3R_20255001 CanS-SH 2298 chr3R 20282202 20282293 chr3R 20282353 20282444 23 151 1.5 6.0 3.8 4.8 242 chr3R 20282202 intron cic + chr3R 20282323 intron cic + chr3R 20282444 intron cic + chr3R_23_20280001 chr3R_20280001 CanS-SH 2299 chr3R 20285378 20285384 chr3R 20285531 20285537 5 153 11.0 5.5 8.2 0.5 159 chr3R 20285378 intron cic + chr3R 20285458 intron cic + chr3R 20285537 intron cic + chr3R_5_20285001 chr3R_20285001 CanS-SH 2300 chr3R 20330939 20330968 chr3R 20331500 20331528 roo 10 561 20.0 12.5 16.2 0.6 589 chr3R 20330939 intergenic Sirt2 + chr3R 20331234 intergenic Sirt2 + chr3R 20331528 intergenic not near genes chr3R_10_20330001 chr3R_20330001 CanS-SH 2301 chr3R 20377707 20377744 chr3R 20377863 20377900 14 156 8.5 8.0 8.2 1.5 193 chr3R 20377707 intergenic not near genes chr3R 20377804 intergenic not near genes chr3R 20377900 intergenic not near genes chr3R_14_20375001 chr3R_20375001 CanS-SH 2302 chr3R 20406417 20406516 chr3R 20406592 20406691 11 175 5.0 6.0 5.5 1.7 274 chr3R 20406417 intron Gfrl - chr3R 20406554 intron Gfrl - chr3R 20406691 intron,exon Gfrl -,CG4335 - chr3R_11_20405001 chr3R_20405001 CanS-SH 2303 chr3R 20430826 20430874 chr3R 20430982 20431030 22 156 10.5 12.5 11.5 1.8 204 chr3R 20430826 intron Gfrl - chr3R 20430928 intron Gfrl - chr3R 20431030 intron Gfrl - chr3R_22_20430001 chr3R_20430001 CanS-SH 2304 chr3R 20438593 20438684 chr3R 20438830 20438921 18 237 5.5 5.5 5.5 2.8 328 chr3R 20438593 intron Gfrl - chr3R 20438757 intron Gfrl - chr3R 20438921 intron Gfrl - chr3R_18_20435001 chr3R_20435001 CanS-SH 2305 chr3R 20453572 20453629 chr3R 20453751 20453808 16 179 8.5 8.0 8.2 1.7 236 chr3R 20453572 intron Gfrl - chr3R 20453690 intron Gfrl - chr3R 20453808 intron Gfrl - chr3R_16_20450001 chr3R_20450001 CanS-SH 2306 chr3R 20468733 20468786 chr3R 20468893 20468946 13 160 9.0 3.0 6.0 1.9 213 chr3R 20468733 intron Gfrl - chr3R 20468840 intron Gfrl - chr3R 20468946 intron Gfrl - chr3R_13_20465001 chr3R_20465001 CanS-SH 2307 chr3R 20469217 20469435 chr3R 20469389 20469597 12 170 0.0 0.0 0.0 12.0 380 chr3R 20469217 intron Gfrl - chr3R 20469407 intron Gfrl - chr3R 20469597 intron Gfrl - chr3R_12_20465001 chr3R_20465001 CanS-SH 2308 chr3R 20483253 20483288 chr3R 20483413 20483448 10 160 3.5 7.5 5.5 1.5 195 chr3R 20483253 intron Gfrl - chr3R 20483350 intron Gfrl - chr3R 20483448 intron Gfrl - chr3R_10_20480001 chr3R_20480001 CanS-SH 2309 chr3R 20503782 20503827 chr3R 20503965 20504010 13 183 12.5 7.5 10.0 1.2 228 chr3R 20503782 intergenic MtnB - chr3R 20503896 intergenic MtnB - chr3R 20504010 intergenic MtnB - chr3R_13_20500001 chr3R_20500001 CanS-SH 2310 chr3R 20512279 20512354 chr3R 20512437 20512512 29 158 7.5 9.5 8.5 3.1 233 chr3R 20512279 intron CG4288 - chr3R 20512396 5` UTR CG4288 - chr3R 20512512 intergenic CG4288 - chr3R_29_20510001 chr3R_20510001 CanS-SH 2311 chr3R 20512939 20513037 chr3R 20515717 20515808 opus 10 2777 8.0 0.0 4.0 2.0 2869 chr3R 20512939 intergenic CG4288 - chr3R 20514374 intergenic not near genes chr3R 20515808 intergenic not near genes chr3R_10_20510001 chr3R_20510001 CanS-SH 2312 chr3R 20575752 20575757 chr3R 20575903 20575908 5 151 19.0 0.0 9.5 0.5 156 chr3R 20575752 intron TFAM - chr3R 20575830 intron TFAM - chr3R 20575908 intron TFAM - chr3R_5_20575001 chr3R_20575001 CanS-SH 2313 chr3R 20594416 20594512 chr3R 20594581 20594682 19 167 3.5 0.0 1.8 6.8 266 chr3R 20594416 intron bon + chr3R 20594549 intron bon + chr3R 20594682 intron bon + chr3R_19_20590001 chr3R_20590001 CanS-SH 2314 chr3R 20613111 20613148 chr3R 20613269 20613306 INE-1 14 158 17.5 8.5 13.0 1.0 195 chr3R 20613111 intron CG15923 - chr3R 20613208 intron CG15923 - chr3R 20613306 intron CG15923 - chr3R_14_20610001 chr3R_20610001 CanS-SH 2315 chr3R 20617437 20617464 chr3R 20617782 20617809 7 345 6.5 10.0 8.2 0.8 372 chr3R 20617437 intergenic CG5466 + chr3R 20617623 intergenic CG5466 + chr3R 20617809 intergenic CG5466 + chr3R_7_20615001 chr3R_20615001 CanS-SH 2316 chr3R 20663644 20663699 chr3R 20663823 20663878 22 179 13.0 7.5 10.2 2.0 234 chr3R 20663644 intergenic not near genes chr3R 20663761 intergenic not near genes chr3R 20663878 intergenic not near genes chr3R_22_20660001 chr3R_20660001 CanS-SH 2317 chr3R 20703420 20703458 chr3R 20703888 20703927 14 469 18.5 10.0 14.2 0.9 507 chr3R 20703420 intron Oamb - chr3R 20703674 intron Oamb - chr3R 20703927 intron Oamb - chr3R_14_20700001 chr3R_20700001 CanS-SH 2318 chr3R 20730873 20730957 chr3R 20731039 20731140 14 173 7.0 0.0 3.5 3.1 267 chr3R 20730873 intergenic not near genes chr3R 20731006 intergenic not near genes chr3R 20731140 intergenic CG31205 + chr3R_14_20730001 chr3R_20730001 CanS-SH 2319 chr3R 20771703 20771707 chr3R 20771859 20771863 4 156 1.5 19.5 10.5 0.3 160 chr3R 20771703 intron,intron Syp +,Takl1 - chr3R 20771783 intron,intron Syp +,Takl1 - chr3R 20771863 intron,exon Syp +,Takl1 - chr3R_4_20770001 chr3R_20770001 CanS-SH 2320 chr3R 20787373 20787452 chr3R 20787539 20787618 15 166 6.5 9.5 8.0 1.7 245 chr3R 20787373 intron Syp + chr3R 20787496 intron Syp + chr3R 20787618 intron Syp + chr3R_15_20785001 chr3R_20785001 CanS-SH 2321 chr3R 20848275 20848357 chr3R 20848440 20848522 18 165 2.5 8.5 5.5 2.8 247 chr3R 20848275 intergenic not near genes chr3R 20848398 intergenic not near genes chr3R 20848522 intergenic not near genes chr3R_18_20845001 chr3R_20845001 CanS-SH 2322 chr3R 20850046 20850107 chr3R 20850206 20850267 15 160 0.0 10.5 5.2 2.4 221 chr3R 20850046 intergenic RpS30 + chr3R 20850156 intergenic RpS30 + chr3R 20850267 intergenic RpS30 + chr3R_15_20850001 chr3R_20850001 CanS-SH 2323 chr3R 20854410 20854439 chr3R 20859280 20859309 Doc 12 4870 13.0 6.5 9.8 1.1 4899 chr3R 20854410 exon Ir93a - chr3R 20856860 intron Ir93a - chr3R 20859309 exon Ir93a - chr3R_12_20855001 chr3R_20855001 CanS-SH 2324 chr3R 20870178 20870263 chr3R 20870339 20870423 24 160 7.5 6.5 7.0 3.0 245 chr3R 20870178 intergenic not near genes chr3R 20870300 intergenic not near genes chr3R 20870423 intergenic not near genes chr3R_24_20870001 chr3R_20870001 CanS-SH 2325 chr3R 20878475 20878523 chr3R 20878631 20878681 4 157 4.0 15.5 9.8 0.4 206 chr3R 20878475 3` UTR CR44048 - chr3R 20878578 3` UTR CR44048 - chr3R 20878681 3` UTR CR44048 - chr3R_4_20875001 chr3R_20875001 CanS-SH 2326 chr3R 20889807 20889853 chr3R 20890377 20890423 12 570 14.5 6.0 10.2 1.1 616 chr3R 20889807 intergenic not near genes chr3R 20890115 intergenic not near genes chr3R 20890423 intergenic not near genes chr3R_12_20890001 chr3R_20890001 CanS-SH 2327 chr3R 20901588 20901642 chr3R 20901766 20901820 16 178 12.0 7.0 9.5 1.5 232 chr3R 20901588 intergenic CG5621 + chr3R 20901704 intergenic CG5621 + chr3R 20901820 intergenic CG5621 + chr3R_16_20900001 chr3R_20900001 CanS-SH 2328 chr3R 20933583 20933608 chr3R 20935635 20935660 7 2052 17.0 9.5 13.2 0.5 2077 chr3R 20933583 intron CG31191 - chr3R 20934622 intron CG31191 - chr3R 20935660 intron CG31191 - chr3R_7_20930001 chr3R_20930001 CanS-SH 2329 chr3R 20936016 20936103 chr3R 20936168 20936255 19 152 5.5 8.5 7.0 2.4 239 chr3R 20936016 intron CG31191 - chr3R 20936136 intron CG31191 - chr3R 20936255 intron CG31191 - chr3R_19_20935001 chr3R_20935001 CanS-SH 2330 chr3R 20966054 20966153 chr3R 20966212 20966311 24 158 5.0 4.5 4.8 4.1 257 chr3R 20966054 intron Atpalpha + chr3R 20966182 intron Atpalpha + chr3R 20966311 intron Atpalpha + chr3R_24_20965001 chr3R_20965001 CanS-SH 2331 chr3R 21041030 21041069 chr3R 21041258 21041296 11 228 16.5 8.5 12.5 0.8 266 chr3R 21041030 exon Dhc93AB - chr3R 21041163 intron Dhc93AB - chr3R 21041296 intron Dhc93AB - chr3R_11_21040001 chr3R_21040001 CanS-SH 2332 chr3R 21107964 21108064 chr3R 21108300 21108400 12 336 6.5 9.0 7.8 1.4 436 chr3R 21107964 5` UTR Sec15 - chr3R 21108182 intergenic Sec15 -,rtet + chr3R 21108400 intergenic rtet +,Sec15 - chr3R_12_21105001 chr3R_21105001 CanS-SH 2333 chr3R 21132561 21132608 chr3R 21132719 21132766 16 158 14.5 0.0 7.2 2.0 205 chr3R 21132561 3` UTR Ice2 + chr3R 21132664 3` UTR Ice2 + chr3R 21132766 exon CG7009 - chr3R_16_21130001 chr3R_21130001 CanS-SH 2334 chr3R 21141613 21141701 chr3R 21150169 21150256 Tirant 10 8555 10.0 6.0 8.0 1.1 8643 chr3R 21141613 intron SNF4Agamma + chr3R 21145934 intron SNF4Agamma + chr3R 21150256 intron SNF4Agamma + chr3R_10_21145001 chr3R_21145001 CanS-SH 2335 chr3R 21154504 21154577 chr3R 21154794 21154867 11 290 5.5 7.0 6.2 1.5 363 chr3R 21154504 intron SNF4Agamma + chr3R 21154686 intron SNF4Agamma + chr3R 21154867 intron SNF4Agamma + chr3R_11_21150001 chr3R_21150001 CanS-SH 2336 chr3R 21187987 21188086 chr3R 21188172 21188270 11 184 2.0 0.0 1.0 5.5 283 chr3R 21187987 intron SNF4Agamma + chr3R 21188128 intron SNF4Agamma + chr3R 21188270 intron SNF4Agamma + chr3R_11_21185001 chr3R_21185001 CanS-SH 2337 chr3R 21189624 21189714 chr3R 21189776 21189867 16 152 6.5 8.5 7.5 1.9 243 chr3R 21189624 intron SNF4Agamma + chr3R 21189746 intron SNF4Agamma + chr3R 21189867 intron SNF4Agamma + chr3R_16_21185001 chr3R_21185001 CanS-SH 2338 chr3R 21240391 21240455 chr3R 21240558 21240622 19 167 9.0 9.0 9.0 1.9 231 chr3R 21240391 intergenic not near genes chr3R 21240506 intergenic not near genes chr3R 21240622 intergenic not near genes chr3R_19_21240001 chr3R_21240001 CanS-SH 2339 chr3R 21464343 21464428 chr3R 21464504 21464587 19 159 4.0 9.0 6.5 2.5 244 chr3R 21464343 intergenic not near genes chr3R 21464465 intergenic not near genes chr3R 21464587 intergenic not near genes chr3R_19_21460001 chr3R_21460001 CanS-SH 2340 chr3R 21471955 21472015 chr3R 21472111 21472171 24 156 12.0 11.0 11.5 1.9 216 chr3R 21471955 intergenic not near genes chr3R 21472063 intergenic not near genes chr3R 21472171 intergenic not near genes chr3R_24_21470001 chr3R_21470001 CanS-SH 2341 chr3R 21506805 21506901 chr3R 21506966 21507056 26 161 8.0 12.0 10.0 2.4 251 chr3R 21506805 intron C15 + chr3R 21506930 intron C15 + chr3R 21507056 intron C15 + chr3R_26_21505001 chr3R_21505001 CanS-SH 2342 chr3R 21517943 21518198 chr3R 21518147 21518353 17 190 0.0 0.0 0.0 17.0 410 chr3R 21517943 intergenic not near genes chr3R 21518148 intergenic not near genes chr3R 21518353 intergenic not near genes chr3R_17_21515001 chr3R_21515001 CanS-SH 2343 chr3R 21519920 21520125 chr3R 21520096 21520294 31 177 0.0 0.0 0.0 31.0 374 chr3R 21519920 intergenic not near genes chr3R 21520107 intergenic not near genes chr3R 21520294 intergenic not near genes chr3R_31_21520001 chr3R_21520001 CanS-SH 2344 chr3R 21527703 21527809 chr3R 21527871 21527961 13 156 4.5 1.0 2.8 3.4 258 chr3R 21527703 3` UTR CG7956 + chr3R 21527832 3` UTR CG7956 + chr3R 21527961 3` UTR CG7956 + chr3R_13_21525001 chr3R_21525001 CanS-SH 2345 chr3R 21587234 21587265 chr3R 21587881 21587912 8 647 12.0 9.0 10.5 0.7 678 chr3R 21587234 intron InR - chr3R 21587573 intron InR - chr3R 21587912 intron InR - chr3R_8_21585001 chr3R_21585001 CanS-SH 2346 chr3R 21651178 21651263 chr3R 21651331 21651416 35 153 8.0 8.5 8.2 3.8 238 chr3R 21651178 intron E2f - chr3R 21651297 intron E2f - chr3R 21651416 intron E2f - chr3R_35_21650001 chr3R_21650001 CanS-SH 2347 chr3R 21731771 21731833 chr3R 21731954 21732015 8 183 6.0 1.5 3.8 1.7 244 chr3R 21731771 intergenic not near genes chr3R 21731893 intergenic not near genes chr3R 21732015 intergenic not near genes chr3R_8_21730001 chr3R_21730001 CanS-SH 2348 chr3R 21733948 21733984 chr3R 21734126 21734162 6 178 13.0 13.5 13.2 0.4 214 chr3R 21733948 intergenic not near genes chr3R 21734055 intergenic not near genes chr3R 21734162 intergenic not near genes chr3R_6_21730001 chr3R_21730001 CanS-SH 2349 chr3R 21761065 21761094 chr3R 21768532 21768561 mdg1 12 7467 13.5 8.5 11.0 1.0 7496 chr3R 21761065 exon CG42335 + chr3R 21764813 intron CG42335 + chr3R 21768561 exon CG42335 + chr3R_12_21760001 chr3R_21760001 CanS-SH 2350 chr3R 21784789 21784888 chr3R 21784962 21785061 9 173 4.5 9.0 6.8 1.2 272 chr3R 21784789 3` UTR,3` UTR CASK -,CRG - chr3R 21784925 3` UTR,3` UTR CASK -,CRG - chr3R 21785061 3` UTR,3` UTR CASK -,CRG - chr3R_9_21780001 chr3R_21780001 CanS-SH 2351 chr3R 21785909 21786001 chr3R 21786066 21786158 20 157 8.5 6.0 7.2 2.4 249 chr3R 21785909 3` UTR,3` UTR CASK -,CRG - chr3R 21786034 3` UTR,3` UTR CASK -,CRG - chr3R 21786158 3` UTR,3` UTR CASK -,CRG - chr3R_20_21785001 chr3R_21785001 CanS-SH 2352 chr3R 21875974 21875985 chr3R 21876125 21876136 11 151 0.0 0.0 0.0 11.0 162 chr3R 21875974 intron CG6656 + chr3R 21876055 intron CG6656 + chr3R 21876136 intron CG6656 + chr3R_11_21875001 chr3R_21875001 CanS-SH 2353 chr3R 21883904 21883994 chr3R 21884056 21884146 13 152 6.5 9.0 7.8 1.5 242 chr3R 21883904 intron,3` UTR CR45046 -,CG31465 + chr3R 21884025 intron,3` UTR CR45046 -,fit - chr3R 21884146 exon fit - chr3R_13_21880001 chr3R_21880001 CanS-SH 2354 chr3R 21903458 21903633 chr3R 21903613 21903805 14 169 0.0 0.0 0.0 14.0 347 chr3R 21903458 intron CG6678 + chr3R 21903632 intron CG6678 + chr3R 21903805 intron CG6678 + chr3R_14_21900001 chr3R_21900001 CanS-SH 2355 chr3R 21937986 21938026 chr3R 21938219 21938259 16 233 8.5 5.5 7.0 2.0 273 chr3R 21937986 intergenic not near genes chr3R 21938122 intergenic not near genes chr3R 21938259 intergenic not near genes chr3R_16_21935001 chr3R_21935001 CanS-SH 2356 chr3R 21939636 21939686 chr3R 21939819 21939869 23 183 12.5 4.0 8.2 2.5 233 chr3R 21939636 intergenic not near genes chr3R 21939752 intergenic not near genes chr3R 21939869 intergenic not near genes chr3R_23_21935001 chr3R_21935001 CanS-SH 2357 chr3R 21989049 21989098 chr3R 21989248 21989297 6 199 14.5 0.0 7.2 0.7 248 chr3R 21989049 intron Eip93F + chr3R 21989173 intron Eip93F + chr3R 21989297 intron Eip93F + chr3R_6_21985001 chr3R_21985001 CanS-SH 2358 chr3R 22055483 22055532 chr3R 22055747 22055796 12 264 13.0 9.5 11.2 1.0 313 chr3R 22055483 intron how + chr3R 22055640 intron how + chr3R 22055796 intron how + chr3R_12_22055001 chr3R_22055001 CanS-SH 2359 chr3R 22069761 22069848 chr3R 22069931 22070018 23 170 7.0 0.0 3.5 5.1 257 chr3R 22069761 intron how + chr3R 22069890 intron how + chr3R 22070018 intron how + chr3R_23_22065001 chr3R_22065001 CanS-SH 2360 chr3R 22084545 22084626 chr3R 22084709 22084790 18 164 7.0 6.5 6.8 2.3 245 chr3R 22084545 intergenic not near genes chr3R 22084668 intergenic not near genes chr3R 22084790 intergenic not near genes chr3R_18_22080001 chr3R_22080001 CanS-SH 2361 chr3R 22234619 22234659 chr3R 22236013 22236053 pogo 21 1394 20.0 8.0 14.0 1.4 1434 chr3R 22234619 intron SKIP + chr3R 22235336 intron SKIP + chr3R 22236053 intron SKIP + chr3R_21_22235001 chr3R_22235001 CanS-SH 2362 chr3R 22239436 22239457 chr3R 22248571 22248592 roo 9 9135 17.5 10.5 14.0 0.6 9156 chr3R 22239436 intron SKIP + chr3R 22244014 intron SKIP + chr3R 22248592 intron SKIP + chr3R_9_22240001 chr3R_22240001 CanS-SH 2363 chr3R 22356078 22356151 chr3R 22356248 22356320 16 170 7.5 8.5 8.0 1.8 242 chr3R 22356078 exon rdhB + chr3R 22356199 3` UTR rdhB + chr3R 22356320 intergenic rdhB +,Sar1 + chr3R_16_22355001 chr3R_22355001 CanS-SH 2364 chr3R 22433032 22433085 chr3R 22433207 22433260 16 175 4.0 17.0 10.5 1.4 228 chr3R 22433032 intron CG13847 - chr3R 22433146 intron CG13847 - chr3R 22433260 intron CG13847 - chr3R_16_22430001 chr3R_22430001 CanS-SH 2365 chr3R 22437718 22437799 chr3R 22437883 22437964 23 165 1.5 4.5 3.0 5.8 246 chr3R 22437718 intergenic not near genes chr3R 22437841 intergenic not near genes chr3R 22437964 intergenic not near genes chr3R_23_22435001 chr3R_22435001 CanS-SH 2366 chr3R 22450482 22450517 chr3R 22453197 22453232 NOF 11 2715 16.5 8.5 12.5 0.8 2750 chr3R 22450482 intron CG34376 + chr3R 22451857 intron CG34376 + chr3R 22453232 intron CG34376 + chr3R_11_22450001 chr3R_22450001 CanS-SH 2367 chr3R 22538376 22538468 chr3R 22538536 22538628 28 160 5.5 5.0 5.2 4.5 252 chr3R 22538376 intron CG5326 - chr3R 22538502 intron CG5326 - chr3R 22538628 intron CG5326 - chr3R_28_22535001 chr3R_22535001 CanS-SH 2368 chr3R 22597307 22597401 chr3R 22597459 22597554 8 152 8.0 6.0 7.0 1.0 247 chr3R 22597307 intron Efa6 + chr3R 22597430 intron Efa6 + chr3R 22597554 intron Efa6 + chr3R_8_22595001 chr3R_22595001 CanS-SH 2369 chr3R 22640644 22640690 chr3R 22640834 22640880 22 190 14.0 10.0 12.0 1.7 236 chr3R 22640644 intron wake + chr3R 22640762 intron wake + chr3R 22640880 intron wake + chr3R_22_22640001 chr3R_22640001 CanS-SH 2370 chr3R 22657614 22657674 chr3R 22657769 22657827 14 154 8.5 12.0 10.2 1.2 213 chr3R 22657614 intron wake + chr3R 22657720 intron wake + chr3R 22657827 intron wake + chr3R_14_22655001 chr3R_22655001 CanS-SH 2371 chr3R 22672227 22672324 chr3R 22672395 22672492 23 168 1.5 9.5 5.5 3.5 265 chr3R 22672227 intron wake + chr3R 22672360 intron wake + chr3R 22672492 intron wake + chr3R_23_22670001 chr3R_22670001 CanS-SH 2372 chr3R 18094455 18094458 chr3R 22687489 22687492 4 4593034 17.5 11.0 14.2 0.3 4593037 chr3R 18094455 intron sr + chr3R 20390974 intron Gfrl - chr3R 22687492 intergenic wfs1 -,CG17625 + chr3R_4_20390001 chr3R_20390001 CanS-SH 2373 chr3R 22769022 22769118 chr3R 22769174 22769270 9 152 6.5 10.0 8.2 1.0 248 chr3R 22769022 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769146 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769270 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_9_22765001 chr3R_22765001 CanS-SH 2374 chr3R 22846728 22846751 chr3R 22847024 22847047 9 296 17.0 5.0 11.0 0.8 319 chr3R 22846728 intergenic CG4704 - chr3R 22846888 intergenic not near genes chr3R 22847047 intergenic not near genes chr3R_9_22845001 chr3R_22845001 CanS-SH 2375 chr3R 22880867 22880904 chr3R 22881080 22881117 10 213 5.0 6.5 5.8 1.5 250 chr3R 22880867 intergenic not near genes chr3R 22880992 intergenic not near genes chr3R 22881117 intergenic not near genes chr3R_10_22880001 chr3R_22880001 CanS-SH 2376 chr3R 23318328 23318369 chr3R 23318489 23318530 12 161 6.5 4.0 5.2 1.9 202 chr3R 23318328 intron pnt - chr3R 23318429 intron pnt - chr3R 23318530 intron pnt - chr3R_12_23315001 chr3R_23315001 CanS-SH 2377 chr3R 23319665 23319676 chr3R 23319818 23319829 7 153 0.5 20.0 10.2 0.6 164 chr3R 23319665 intron pnt - chr3R 23319747 intron pnt - chr3R 23319829 intron pnt - chr3R_7_23315001 chr3R_23315001 CanS-SH 2378 chr3R 23356940 23357007 chr3R 23357101 23357168 18 161 6.5 3.0 4.8 3.1 228 chr3R 23356940 exon Sec13 + chr3R 23357054 intron Sec13 + chr3R 23357168 intron Sec13 + chr3R_18_23355001 chr3R_23355001 CanS-SH 2379 chr3R 23385519 23385569 chr3R 23385716 23385767 21 197 13.5 11.0 12.2 1.6 248 chr3R 23385519 intergenic not near genes chr3R 23385643 intergenic not near genes chr3R 23385767 intergenic not near genes chr3R_21_23385001 chr3R_23385001 CanS-SH 2380 chr3R 23390890 23390955 chr3R 23391047 23391107 9 155 6.0 10.5 8.2 1.0 217 chr3R 23390890 intergenic CR43387 + chr3R 23390998 intergenic CR43387 + chr3R 23391107 intergenic not near genes chr3R_9_23390001 chr3R_23390001 CanS-SH 2381 chr3R 23515503 23515522 chr3R 23516739 23516758 1360 4 1236 7.0 2.5 4.8 0.7 1255 chr3R 23515503 intron Irk2 - chr3R 23516130 intron Irk2 - chr3R 23516758 intron Irk2 - chr3R_4_23515001 chr3R_23515001 CanS-SH 2382 chr3R 23558335 23558418 chr3R 23560191 23560274 Bari1 12 1856 6.5 7.0 6.8 1.5 1939 chr3R 23558335 intron beat-IV + chr3R 23559304 intron beat-IV + chr3R 23560274 intron beat-IV + chr3R_12_23555001 chr3R_23555001 CanS-SH 2383 chr3R 23564373 23564413 chr3R 23564592 23564632 14 219 20.0 8.0 14.0 0.9 259 chr3R 23564373 intron beat-IV + chr3R 23564502 intron beat-IV + chr3R 23564632 intron beat-IV + chr3R_14_23560001 chr3R_23560001 CanS-SH 2384 chr3R 23643896 23643952 chr3R 23644051 23644106 10 154 10.5 9.0 9.8 0.9 210 chr3R 23643896 intron CG31145 - chr3R 23644001 intron CG31145 - chr3R 23644106 intron CG31145 - chr3R_10_23640001 chr3R_23640001 CanS-SH 2385 chr3R 23650185 23650274 chr3R 23650375 23650486 6 205 1.5 0.0 0.8 3.3 301 chr3R 23650185 intron CG31145 - chr3R 23650336 intron CG31145 - chr3R 23650486 intron CG31145 - chr3R_6_23650001 chr3R_23650001 CanS-SH 2386 chr3R 23684629 23684670 chr3R 23685190 23685231 roo 15 561 11.5 2.5 7.0 1.9 602 chr3R 23684629 exon CG18754 + chr3R 23684930 intron CG18754 + chr3R 23685231 exon CG18754 + chr3R_15_23680001 chr3R_23680001 CanS-SH 2387 chr3R 23688406 23688506 chr3R 23688572 23688685 16 168 6.0 0.0 3.0 4.0 279 chr3R 23688406 intergenic SPE + chr3R 23688546 intergenic SPE +,CG10254 - chr3R 23688685 intergenic CG10254 - chr3R_16_23685001 chr3R_23685001 CanS-SH 2388 chr3R 23820575 23820655 chr3R 23820734 23820814 29 159 6.5 8.5 7.5 3.4 239 chr3R 23820575 5` UTR CG34355 + chr3R 23820694 5` UTR CG34355 + chr3R 23820814 5` UTR CG34355 + chr3R_29_23820001 chr3R_23820001 CanS-SH 2389 chr3R 23835344 23835403 chr3R 23844569 23844626 roo 11 9224 14.0 0.0 7.0 1.4 9282 chr3R 23835344 intron CG34355 + chr3R 23839985 intron CG34355 + chr3R 23844626 intron CG34355 + chr3R_11_23835001 chr3R_23835001 CanS-SH 2390 chr3R 23851017 23851034 chr3R 23858759 23858776 opus 12 7742 13.5 14.5 14.0 0.8 7759 chr3R 23851017 3` UTR CG34355 + chr3R 23854896 intergenic not near genes chr3R 23858776 intergenic not near genes chr3R_12_23850001 chr3R_23850001 CanS-SH 2391 chr3R 23864966 23865039 chr3R 23865130 23865203 25 164 11.5 8.5 10.0 2.3 237 chr3R 23864966 intron Pli - chr3R 23865084 intron Pli - chr3R 23865203 intron Pli - chr3R_25_23865001 chr3R_23865001 CanS-SH 2392 chr3R 23873908 23873959 chr3R 23874066 23874117 20 158 18.5 14.5 16.5 1.1 209 chr3R 23873908 intron Pli - chr3R 23874012 intron Pli - chr3R 23874117 intron Pli - chr3R_20_23870001 chr3R_23870001 CanS-SH 2393 chr3R 23944831 23944922 chr3R 23944991 23945082 28 160 8.5 6.0 7.2 3.4 251 chr3R 23944831 intron CG12268 - chr3R 23944956 intron CG12268 - chr3R 23945082 exon CG12268 - chr3R_28_23940001 chr3R_23940001 CanS-SH 2394 chr3R 23948973 23949066 chr3R 23949125 23949218 35 152 9.5 11.0 10.2 3.1 245 chr3R 23948973 intergenic not near genes chr3R 23949096 intergenic not near genes chr3R 23949218 intergenic not near genes chr3R_35_23945001 chr3R_23945001 CanS-SH 2395 chr3R 24011659 24011679 chr3R 24011817 24011837 10 158 4.5 11.5 8.0 1.1 178 chr3R 24011659 intron KrT95D - chr3R 24011748 intron KrT95D - chr3R 24011837 intron KrT95D - chr3R_10_24010001 chr3R_24010001 CanS-SH 2396 chr3R 24021557 24021642 chr3R 24021722 24021806 20 165 6.5 8.0 7.2 2.4 249 chr3R 24021557 intron KrT95D - chr3R 24021682 intron KrT95D - chr3R 24021806 intron KrT95D - chr3R_20_24020001 chr3R_24020001 CanS-SH 2397 chr3R 24069514 24069554 chr3R 24069679 24069717 7 164 6.5 14.5 10.5 0.6 203 chr3R 24069514 intron 4EHP - chr3R 24069616 intron 4EHP - chr3R 24069717 intron 4EHP - chr3R_7_24065001 chr3R_24065001 CanS-SH 2398 chr3R 24072060 24072082 chr3R 24072571 24072593 jockey 9 511 11.0 0.0 5.5 1.4 533 chr3R 24072060 intron 4EHP - chr3R 24072326 intron 4EHP - chr3R 24072593 intron 4EHP - chr3R_9_24070001 chr3R_24070001 CanS-SH 2399 chr3R 24076862 24076893 chr3R 24078404 24078435 hobo 10 1542 15.5 12.0 13.8 0.7 1573 chr3R 24076862 intron 4EHP - chr3R 24077648 intron 4EHP - chr3R 24078435 intron 4EHP - chr3R_10_24075001 chr3R_24075001 CanS-SH 2400 chr3R 24605498 24605552 chr3R 24605661 24605715 17 163 10.0 13.5 11.8 1.3 217 chr3R 24605498 intron mld + chr3R 24605606 intron mld + chr3R 24605715 intron mld + chr3R_17_24605001 chr3R_24605001 CanS-SH 2401 chr3R 24624301 24624379 chr3R 24624465 24624543 16 164 0.0 7.5 3.8 3.3 242 chr3R 24624301 intron Syx18 - chr3R 24624422 intron Syx18 - chr3R 24624543 exon Syx18 - chr3R_16_24620001 chr3R_24620001 CanS-SH 2402 chr3R 24667541 24667567 chr3R 24667693 24667719 11 152 17.0 0.0 8.5 1.2 178 chr3R 24667541 intron slo + chr3R 24667630 intron slo + chr3R 24667719 intron slo + chr3R_11_24665001 chr3R_24665001 CanS-SH 2403 chr3R 24671154 24671248 chr3R 24671306 24671400 14 152 8.5 5.5 7.0 1.8 246 chr3R 24671154 intron slo + chr3R 24671277 intron slo + chr3R 24671400 intron slo + chr3R_14_24670001 chr3R_24670001 CanS-SH 2404 chr3R 24730034 24730046 chr3R 24732487 24732499 Doc 7 2453 16.5 3.5 10.0 0.6 2465 chr3R 24730034 intron tok + chr3R 24731266 intron tok + chr3R 24732499 intron tok + chr3R_7_24730001 chr3R_24730001 CanS-SH 2405 chr3R 24742965 24743027 chr3R 24743125 24743187 23 160 13.0 6.5 9.8 2.1 222 chr3R 24742965 intron tok + chr3R 24743076 intron tok + chr3R 24743187 exon tok + chr3R_23_24740001 chr3R_24740001 CanS-SH 2406 chr3R 24789912 24790005 chr3R 24790132 24790225 14 220 5.0 6.0 5.5 2.2 313 chr3R 24789912 intron,5` UTR Ets96B +,CG13634 - chr3R 24790068 intron,5` UTR Ets96B +,CG13634 - chr3R 24790225 intron Ets96B + chr3R_14_24790001 chr3R_24790001 CanS-SH 2407 chr3R 24854821 24854906 chr3R 24854978 24855063 26 157 6.0 7.0 6.5 3.5 242 chr3R 24854821 3` UTR,3` UTR nct +,HdacX - chr3R 24854942 3` UTR HdacX - chr3R 24855063 3` UTR HdacX - chr3R_26_24850001 chr3R_24850001 CanS-SH 2408 chr3R 24908109 24908170 chr3R 24908287 24908348 23 178 10.0 3.5 6.8 2.9 239 chr3R 24908109 intergenic not near genes chr3R 24908228 intergenic not near genes chr3R 24908348 intergenic not near genes chr3R_23_24905001 chr3R_24905001 CanS-SH 2409 chr3R 24912420 24912494 chr3R 24912577 24912651 18 157 9.0 0.0 4.5 3.3 231 chr3R 24912420 intergenic not near genes chr3R 24912536 intergenic CR44267 + chr3R 24912651 intergenic CR44267 + chr3R_18_24910001 chr3R_24910001 CanS-SH 2410 chr3R 24927068 24927102 chr3R 24931934 24931968 Doc 18 4866 17.5 10.5 14.0 1.2 4900 chr3R 24927068 3` UTR Trf4-2 + chr3R 24929518 intergenic not near genes chr3R 24931968 intergenic CG11771 + chr3R_18_24925001 chr3R_24925001 CanS-SH 2411 chr3R 25004834 25004913 chr3R 25004992 25005071 12 158 11.5 10.5 11.0 1.0 237 chr3R 25004834 intron tnc + chr3R 25004952 intron tnc + chr3R 25005071 intron tnc + chr3R_12_25000001 chr3R_25000001 CanS-SH 2412 chr3R 25053041 25053157 chr3R 25053215 25053318 24 173 0.0 5.5 2.8 6.3 277 chr3R 25053041 3` UTR CG11791 + chr3R 25053180 intergenic CG11791 +,CG31109 - chr3R 25053318 intergenic CG31109 -,CG11791 + chr3R_24_25050001 chr3R_25050001 CanS-SH 2413 chr3R 25136337 25136410 chr3R 25136492 25136565 21 155 8.0 6.5 7.2 2.6 228 chr3R 25136337 3` UTR Bili + chr3R 25136451 3` UTR Bili + chr3R 25136565 3` UTR Bili + chr3R_21_25135001 chr3R_25135001 CanS-SH 2414 chr3R 25207570 25207625 chr3R 25207738 25207793 18 168 12.0 5.5 8.8 1.8 223 chr3R 25207570 intron,intron Cad96Ca -,CG13654 + chr3R 25207682 intron,intron Cad96Ca -,CG13654 + chr3R 25207793 intron,intron Cad96Ca -,CG13654 + chr3R_18_25205001 chr3R_25205001 CanS-SH 2415 chr3R 25209537 25209625 chr3R 25209723 25209815 10 188 7.5 8.0 7.8 1.1 278 chr3R 25209537 intron CG13654 + chr3R 25209676 intron CG13654 + chr3R 25209815 intron CG13654 + chr3R_10_25205001 chr3R_25205001 CanS-SH 2416 chr3R 25235756 25235826 chr3R 25235911 25235981 10 155 12.0 11.5 11.8 0.8 225 chr3R 25235756 intergenic CG10420 - chr3R 25235868 intergenic CG10420 - chr3R 25235981 intergenic CG10420 - chr3R_10_25235001 chr3R_25235001 CanS-SH 2417 chr3R 25267709 25267725 chr3R 25267860 25267876 6 151 11.0 0.0 5.5 0.9 167 chr3R 25267709 3` UTR,intron RIOK2 +,CR45214 - chr3R 25267792 intron CR45214 - chr3R 25267876 intron CR45214 - chr3R_6_25265001 chr3R_25265001 CanS-SH 2418 chr3R 25368414 25368465 chr3R 25368607 25368662 11 195 9.0 0.0 4.5 2.0 248 chr3R 25368414 intron Fur1 - chr3R 25368538 intron Fur1 - chr3R 25368662 intron Fur1 - chr3R_11_25365001 chr3R_25365001 CanS-SH 2419 chr3R 25411706 25411794 chr3R 25411877 25411972 13 172 6.5 4.5 5.5 2.0 266 chr3R 25411706 intron Fur1 - chr3R 25411839 intron Fur1 - chr3R 25411972 intron Fur1 - chr3R_13_25410001 chr3R_25410001 CanS-SH 2420 chr3R 25514398 25514450 chr3R 25514554 25514606 14 156 0.0 10.0 5.0 2.3 208 chr3R 25514398 intergenic not near genes chr3R 25514502 intergenic not near genes chr3R 25514606 intergenic not near genes chr3R_14_25510001 chr3R_25510001 CanS-SH 2421 chr3R 25520932 25520978 chr3R 25521106 25521152 14 174 13.0 15.5 14.2 0.9 220 chr3R 25520932 intron msi + chr3R 25521042 intron msi + chr3R 25521152 intron msi + chr3R_14_25520001 chr3R_25520001 CanS-SH 2422 chr3R 25534934 25535011 chr3R 25535099 25535176 22 165 9.5 9.0 9.2 2.2 242 chr3R 25534934 intron msi + chr3R 25535055 intron msi + chr3R 25535176 intron msi + chr3R_22_25535001 chr3R_25535001 CanS-SH 2423 chr3R 25559463 25559484 chr3R 25559633 25559654 4 170 10.0 11.5 10.8 0.3 191 chr3R 25559463 intron msi + chr3R 25559558 intron msi + chr3R 25559654 intron msi + chr3R_4_25555001 chr3R_25555001 CanS-SH 2424 chr3R 25576780 25576808 chr3R 25576954 25576982 5 174 16.0 5.0 10.5 0.4 202 chr3R 25576780 intron msi + chr3R 25576881 intron msi + chr3R 25576982 intron msi + chr3R_5_25575001 chr3R_25575001 CanS-SH 2425 chr3R 25591361 25591421 chr3R 25591514 25591573 14 153 12.5 0.0 6.2 1.9 212 chr3R 25591361 intron msi + chr3R 25591467 intron msi + chr3R 25591573 intron,3` UTR msi +,ymp - chr3R_14_25590001 chr3R_25590001 CanS-SH 2426 chr3R 25689068 25689119 chr3R 25689251 25689302 20 183 12.0 11.0 11.5 1.6 234 chr3R 25689068 intergenic not near genes chr3R 25689185 intergenic not near genes chr3R 25689302 intergenic not near genes chr3R_20_25685001 chr3R_25685001 CanS-SH 2427 chr3R 25725768 25725806 chr3R 25735003 25735041 roo 15 9235 19.0 11.0 15.0 0.9 9273 chr3R 25725768 intron LpR2 - chr3R 25730404 intron LpR2 - chr3R 25735041 intron LpR2 - chr3R_15_25730001 chr3R_25730001 CanS-SH 2428 chr3R 25832637 25832667 chr3R 25841894 25841924 roo 11 9257 15.0 11.5 13.2 0.8 9287 chr3R 25832637 exon alpha4GT2 + chr3R 25837280 intron alpha4GT2 + chr3R 25841924 exon alpha4GT2 + chr3R_11_25835001 chr3R_25835001 CanS-SH 2429 chr3R 25843588 25843608 chr3R 25843793 25843813 11 205 14.0 12.0 13.0 0.8 225 chr3R 25843588 intergenic CR45653 + chr3R 25843700 intergenic CR45653 + chr3R 25843813 intergenic CR45653 + chr3R_11_25840001 chr3R_25840001 CanS-SH 2430 chr3R 25920791 25920880 chr3R 25920947 25921038 18 157 8.0 0.5 4.2 3.5 247 chr3R 25920791 exon CG42235 + chr3R 25920914 3` UTR CG42235 + chr3R 25921038 3` UTR CG42235 + chr3R_18_25920001 chr3R_25920001 CanS-SH 2431 chr3R 25927440 25927537 chr3R 25927597 25927692 24 156 6.0 7.5 6.8 3.1 252 chr3R 25927440 intron CCAP-R - chr3R 25927566 intron CCAP-R - chr3R 25927692 intron CCAP-R - chr3R_24_25925001 chr3R_25925001 CanS-SH 2432 chr3R 26126478 26126565 chr3R 26126639 26126726 23 161 6.5 10.0 8.2 2.5 248 chr3R 26126478 intron CG31324 + chr3R 26126602 intron CG31324 + chr3R 26126726 intron,5` UTR CG31324 +,CG14556 + chr3R_23_26125001 chr3R_26125001 CanS-SH 2433 chr3R 26227824 26227846 chr3R 26227980 26228002 7 156 5.0 6.5 5.8 1.0 178 chr3R 26227824 intergenic not near genes chr3R 26227913 intergenic not near genes chr3R 26228002 intergenic not near genes chr3R_7_26225001 chr3R_26225001 CanS-SH 2434 chr3R 26326619 26326679 chr3R 26326777 26326838 25 158 8.5 5.5 7.0 3.1 219 chr3R 26326619 intron CG33970 + chr3R 26326728 intron CG33970 + chr3R 26326838 intron CG33970 + chr3R_25_26325001 chr3R_26325001 CanS-SH 2435 chr3R 26342952 26343044 chr3R 26343543 26343635 15 591 6.5 6.0 6.2 2.1 683 chr3R 26342952 intron CG33970 + chr3R 26343294 intron CG33970 + chr3R 26343635 intron CG33970 + chr3R_15_26340001 chr3R_26340001 CanS-SH 2436 chr3R 26376263 26376352 chr3R 26385498 26385601 roo 13 9236 8.0 0.0 4.0 2.6 9338 chr3R 26376263 intergenic not near genes chr3R 26380932 intergenic not near genes chr3R 26385601 intergenic not near genes chr3R_13_26380001 chr3R_26380001 CanS-SH 2437 chr3R 26510446 26510489 chr3R 26519576 26519619 roo 12 9130 11.5 9.0 10.2 1.1 9173 chr3R 26510446 intron plum - chr3R 26515032 intron plum - chr3R 26519619 intron,5` UTR plum -,CR45226 + chr3R_12_26515001 chr3R_26515001 CanS-SH 2438 chr3R 26540932 26541022 chr3R 26541087 26541176 29 155 4.5 6.5 5.5 4.5 244 chr3R 26540932 intron scrib + chr3R 26541054 intron scrib + chr3R 26541176 intron scrib + chr3R_29_26540001 chr3R_26540001 CanS-SH 2439 chr3R 26541978 26542068 chr3R 26542143 26542234 22 166 5.0 6.5 5.8 3.2 256 chr3R 26541978 intron scrib + chr3R 26542106 intron scrib + chr3R 26542234 intron scrib + chr3R_22_26540001 chr3R_26540001 CanS-SH 2440 chr3R 26558263 26558293 chr3R 26565651 26565681 Stalker4 8 7388 14.5 8.0 11.2 0.7 7418 chr3R 26558263 intron scrib + chr3R 26561972 intron scrib + chr3R 26565681 intron scrib + chr3R_8_26560001 chr3R_26560001 CanS-SH 2441 chr3R 26641567 26641659 chr3R 26641729 26641821 41 162 8.5 9.5 9.0 4.1 254 chr3R 26641567 intergenic not near genes chr3R 26641694 intergenic not near genes chr3R 26641821 intergenic not near genes chr3R_41_26640001 chr3R_26640001 CanS-SH 2442 chr3R 26642679 26642709 chr3R 26643148 26643178 jockey 9 469 16.5 3.0 9.8 0.8 499 chr3R 26642679 intergenic not near genes chr3R 26642928 intergenic not near genes chr3R 26643178 intergenic not near genes chr3R_9_26640001 chr3R_26640001 CanS-SH 2443 chr3R 26669608 26669672 chr3R 26669765 26669829 21 157 10.5 5.5 8.0 2.3 221 chr3R 26669608 intron beat-VII - chr3R 26669718 intron beat-VII - chr3R 26669829 intron beat-VII - chr3R_21_26665001 chr3R_26665001 CanS-SH 2444 chr3R 26692095 26692131 chr3R 26692336 26692372 11 241 18.0 8.5 13.2 0.8 277 chr3R 26692095 intergenic TwdlQ - chr3R 26692234 intergenic TwdlQ - chr3R 26692372 intergenic TwdlQ - chr3R_11_26690001 chr3R_26690001 CanS-SH 2445 chr3R 26810494 26810525 chr3R 26811054 26811085 roo 12 560 18.0 9.0 13.5 0.8 591 chr3R 26810494 intron Tl + chr3R 26810790 intron Tl + chr3R 26811085 intron Tl + chr3R_12_26810001 chr3R_26810001 CanS-SH 2446 chr3R 26925201 26925279 chr3R 26925689 26925767 15 488 9.0 2.0 5.5 2.3 566 chr3R 26925201 5` UTR sda + chr3R 26925484 intron sda + chr3R 26925767 intron sda + chr3R_15_26925001 chr3R_26925001 CanS-SH 2447 chr3R 27007336 27007371 chr3R 27016546 27016581 roo 16 9210 14.5 7.0 10.8 1.4 9245 chr3R 27007336 intron RYa-R + chr3R 27011958 intron RYa-R + chr3R 27016581 intron RYa-R + chr3R_16_27010001 chr3R_27010001 CanS-SH 2448 chr3R 27027611 27027704 chr3R 27027770 27027861 18 159 8.5 5.5 7.0 2.2 250 chr3R 27027611 intron RYa-R + chr3R 27027736 intron RYa-R + chr3R 27027861 intron RYa-R + chr3R_18_27025001 chr3R_27025001 CanS-SH 2449 chr3R 27028659 27028750 chr3R 27028813 27028904 36 154 7.5 8.0 7.8 4.1 245 chr3R 27028659 exon RYa-R + chr3R 27028782 intron RYa-R + chr3R 27028904 intron RYa-R + chr3R_36_27025001 chr3R_27025001 CanS-SH 2450 chr3R 27043246 27043337 chr3R 27043411 27043502 23 165 6.5 7.0 6.8 2.9 256 chr3R 27043246 intron RYa-R + chr3R 27043374 intron RYa-R + chr3R 27043502 intron RYa-R + chr3R_23_27040001 chr3R_27040001 CanS-SH 2451 chr3R 27091493 27091590 chr3R 27091647 27091742 7 154 5.5 0.5 3.0 1.8 249 chr3R 27091493 intergenic Cpr97Eb - chr3R 27091618 intergenic Cpr97Eb - chr3R 27091742 intergenic not near genes chr3R_7_27090001 chr3R_27090001 CanS-SH 2452 chr3R 27140468 27140492 chr3R 27148153 27148177 412 8 7685 15.0 11.5 13.2 0.6 7709 chr3R 27140468 intron CG6051 - chr3R 27144322 intron CG6051 - chr3R 27148177 intron CG6051 - chr3R_8_27140001 chr3R_27140001 CanS-SH 2453 chr3R 27221176 27221258 chr3R 27221339 27221423 19 164 7.0 5.0 6.0 2.7 247 chr3R 27221176 intergenic not near genes chr3R 27221300 intergenic not near genes chr3R 27221423 intergenic not near genes chr3R_19_27220001 chr3R_27220001 CanS-SH 2454 chr3R 27292210 27292264 chr3R 27292397 27292451 19 187 12.0 2.5 7.2 2.3 241 chr3R 27292210 intergenic CG3348 - chr3R 27292330 intergenic CG3348 - chr3R 27292451 intergenic CG3348 - chr3R_19_27290001 chr3R_27290001 CanS-SH 2455 chr3R 27315923 27315997 chr3R 27316074 27316148 23 151 13.0 2.5 7.8 2.6 225 chr3R 27315923 intron CG3339 - chr3R 27316036 intron CG3339 - chr3R 27316148 exon CG3339 - chr3R_23_27315001 chr3R_27315001 CanS-SH 2456 chr3R 27335874 27335901 chr3R 27336029 27336057 7 156 13.5 0.0 6.8 0.9 183 chr3R 27335874 intergenic not near genes chr3R 27335966 intergenic not near genes chr3R 27336057 intergenic not near genes chr3R_7_27335001 chr3R_27335001 CanS-SH 2457 chr3R 27342735 27342770 chr3R 27351389 27351426 Tirant 13 8656 11.5 6.0 8.8 1.3 8691 chr3R 27342735 intron CG42534 + chr3R 27347080 intron CG42534 + chr3R 27351426 intron CG42534 + chr3R_13_27345001 chr3R_27345001 CanS-SH 2458 chr3R 27377406 27377484 chr3R 27377569 27377647 20 163 5.0 3.0 4.0 4.0 241 chr3R 27377406 3` UTR side - chr3R 27377526 3` UTR side - chr3R 27377647 3` UTR side - chr3R_20_27375001 chr3R_27375001 CanS-SH 2459 chr3R 27496530 27496568 chr3R 27496710 27496748 15 180 11.5 8.0 9.8 1.4 218 chr3R 27496530 intergenic not near genes chr3R 27496639 intergenic not near genes chr3R 27496748 intergenic not near genes chr3R_15_27495001 chr3R_27495001 CanS-SH 2460 chr3R 27521099 27521131 chr3R 27530383 27530415 roo 12 9284 14.0 6.5 10.2 1.1 9316 chr3R 27521099 intron CG12885 + chr3R 27525757 intron CG12885 + chr3R 27530415 intron CG12885 + chr3R_12_27525001 chr3R_27525001 CanS-SH 2461 chr3R 27555054 27555143 chr3R 27555306 27555395 20 252 11.5 5.5 8.5 2.1 341 chr3R 27555054 intron Klp98A - chr3R 27555224 intron Klp98A - chr3R 27555395 exon Klp98A - chr3R_20_27555001 chr3R_27555001 CanS-SH 2462 chr3R 27578418 27578495 chr3R 27578583 27578660 31 165 10.0 5.0 7.5 3.6 242 chr3R 27578418 intron wdb - chr3R 27578539 intron wdb - chr3R 27578660 intron wdb - chr3R_31_27575001 chr3R_27575001 CanS-SH 2463 chr3R 27585497 27585576 chr3R 27585656 27585735 34 159 11.0 11.0 11.0 2.8 238 chr3R 27585497 3` UTR raps + chr3R 27585616 3` UTR raps + chr3R 27585735 3` UTR raps + chr3R_34_27585001 chr3R_27585001 CanS-SH 2464 chr3R 27585848 27585922 chr3R 27586014 27586083 21 165 9.5 14.0 11.8 1.6 235 chr3R 27585848 3` UTR raps + chr3R 27585966 3` UTR raps + chr3R 27586083 3` UTR raps + chr3R_21_27585001 chr3R_27585001 CanS-SH 2465 chr3R 27622164 27622227 chr3R 27622334 27622397 17 170 17.5 10.0 13.8 1.1 233 chr3R 27622164 intron Tusp + chr3R 27622280 intron Tusp + chr3R 27622397 intron Tusp + chr3R_17_27620001 chr3R_27620001 CanS-SH 2466 chr3R 27700379 27700408 chr3R 27700539 27700568 8 160 13.5 6.5 10.0 0.7 189 chr3R 27700379 5` UTR btz + chr3R 27700474 5` UTR btz + chr3R 27700568 intron btz + chr3R_8_27700001 chr3R_27700001 CanS-SH 2467 chr3R 27725509 27725539 chr3R 27731026 27731056 I-element 13 5517 17.0 10.0 13.5 0.9 5547 chr3R 27725509 intergenic not near genes chr3R 27728282 intergenic not near genes chr3R 27731056 intergenic not near genes chr3R_13_27725001 chr3R_27725001 CanS-SH 2468 chr3R 27731134 27731222 chr3R 27731290 27731378 26 156 5.5 13.0 9.2 2.5 244 chr3R 27731134 intergenic not near genes chr3R 27731256 intergenic not near genes chr3R 27731378 intergenic not near genes chr3R_26_27730001 chr3R_27730001 CanS-SH 2469 chr3R 27779225 27779267 chr3R 27779380 27779422 13 155 0.0 12.5 6.2 1.8 197 chr3R 27779225 exon CG34353 - chr3R 27779324 intron CG34353 - chr3R 27779422 intron CG34353 - chr3R_13_27775001 chr3R_27775001 CanS-SH 2470 chr3R 27799865 27799963 chr3R 27800022 27800120 19 157 5.5 5.0 5.2 3.1 255 chr3R 27799865 intron CG34353 - chr3R 27799992 intron CG34353 - chr3R 27800120 intron CG34353 - chr3R_19_27795001 chr3R_27795001 CanS-SH 2471 chr3R 27840169 27840259 chr3R 27840366 27840467 11 205 9.0 0.0 4.5 2.0 298 chr3R 27840169 intron CG34353 - chr3R 27840318 intron CG34353 - chr3R 27840467 intron CG34353 - chr3R_11_27840001 chr3R_27840001 CanS-SH 2472 chr3R 27856697 27856736 chr3R 27858255 27858294 hopper2 6 1558 9.5 4.0 6.8 0.8 1597 chr3R 27856697 intron CG34353 - chr3R 27857496 intron CG34353 - chr3R 27858294 intron CG34353 - chr3R_6_27855001 chr3R_27855001 CanS-SH 2473 chr3R 27862893 27862929 chr3R 27868273 27868309 Transpac 11 5380 13.5 11.5 12.5 0.8 5416 chr3R 27862893 intron CG34353 - chr3R 27865601 intron CG34353 - chr3R 27868309 intron CG34353 - chr3R_11_27865001 chr3R_27865001 CanS-SH 2474 chr3R 27870993 27871044 chr3R 27871169 27871220 19 176 11.0 4.5 7.8 2.2 227 chr3R 27870993 intron CG34353 - chr3R 27871106 intron CG34353 - chr3R 27871220 intron CG34353 - chr3R_19_27870001 chr3R_27870001 CanS-SH 2475 chr3R 27875641 27875675 chr3R 27882771 27882805 297 12 7130 16.0 14.0 15.0 0.8 7164 chr3R 27875641 intron CG34353 - chr3R 27879223 intron CG34353 - chr3R 27882805 intron CG34353 - chr3R_12_27875001 chr3R_27875001 CanS-SH 2476 chr3R 27941595 27941686 chr3R 27941768 27941859 16 173 6.0 4.5 5.2 2.6 264 chr3R 27941595 exon CG5514 + chr3R 27941727 exon CG5514 + chr3R 27941859 exon CG5514 + chr3R_16_27940001 chr3R_27940001 CanS-SH 2477 chr3R 27970770 27970865 chr3R 27970934 27971031 5 165 8.0 5.5 6.8 0.6 261 chr3R 27970770 intron betaTub97EF - chr3R 27970900 intron betaTub97EF - chr3R 27971031 intron betaTub97EF - chr3R_5_27970001 chr3R_27970001 CanS-SH 2478 chr3R 27973787 27973876 chr3R 27973943 27974032 26 156 5.0 7.0 6.0 3.7 245 chr3R 27973787 intron betaTub97EF - chr3R 27973910 intron betaTub97EF - chr3R 27974032 intron betaTub97EF - chr3R_26_27970001 chr3R_27970001 CanS-SH 2479 chr3R 28019522 28019562 chr3R 28019692 28019732 5 170 3.5 4.5 4.0 1.0 210 chr3R 28019522 intergenic not near genes chr3R 28019627 intergenic not near genes chr3R 28019732 intergenic not near genes chr3R_5_28015001 chr3R_28015001 CanS-SH 2480 chr3R 28068421 28068436 chr3R 28073938 28073953 I-element 4 5517 0.0 3.5 1.8 1.4 5532 chr3R 28068421 intron CG34362 + chr3R 28071187 intron CG34362 + chr3R 28073953 intron CG34362 + chr3R_4_28070001 chr3R_28070001 CanS-SH 2481 chr3R 28164815 28164907 chr3R 28164968 28165060 9 153 8.5 2.0 5.2 1.5 245 chr3R 28164815 intron CG34354 + chr3R 28164938 intron CG34354 + chr3R 28165060 intron CG34354 + chr3R_9_28160001 chr3R_28160001 CanS-SH 2482 chr3R 28173598 28173622 chr3R 28181103 28181127 mdg1 7 7505 3.5 4.0 3.8 1.5 7529 chr3R 28173598 intron CG34354 + chr3R 28177362 intron CG34354 + chr3R 28181127 intron CG34354 + chr3R_7_28175001 chr3R_28175001 CanS-SH 2483 chr3R 28253286 28253305 chr3R 28255871 28255890 jockey 8 2585 15.5 10.0 12.8 0.6 2604 chr3R 28253286 intergenic not near genes chr3R 28254588 intergenic not near genes chr3R 28255890 intergenic not near genes chr3R_8_28250001 chr3R_28250001 CanS-SH 2484 chr3R 28262632 28262670 chr3R 28262783 28262821 17 151 12.0 12.0 12.0 1.3 189 chr3R 28262632 intergenic CG43125 - chr3R 28262726 intergenic CG43125 - chr3R 28262821 exon CG43125 - chr3R_17_28260001 chr3R_28260001 CanS-SH 2485 chr3R 28302029 28302112 chr3R 28302546 28302629 jockey 19 517 5.5 8.5 7.0 2.4 600 chr3R 28302029 intergenic not near genes chr3R 28302329 intergenic not near genes chr3R 28302629 intergenic not near genes chr3R_19_28300001 chr3R_28300001 CanS-SH 2486 chr3R 28345612 28345669 chr3R 28345763 28345820 18 151 10.0 11.0 10.5 1.6 208 chr3R 28345612 intergenic Moca-cyp + chr3R 28345716 intergenic not near genes chr3R 28345820 intergenic not near genes chr3R_18_28345001 chr3R_28345001 CanS-SH 2487 chr3R 28352450 28352489 chr3R 28352865 28352904 12 415 17.5 7.0 12.2 0.9 454 chr3R 28352450 exon Or98b + chr3R 28352677 exon Or98b + chr3R 28352904 exon Or98b + chr3R_12_28350001 chr3R_28350001 CanS-SH 2488 chr3R 28380737 28380771 chr3R 28381046 28381080 14 309 15.0 8.5 11.8 1.1 343 chr3R 28380737 intergenic not near genes chr3R 28380908 intergenic not near genes chr3R 28381080 intergenic not near genes chr3R_14_28380001 chr3R_28380001 CanS-SH 2489 chr3R 28407647 28407721 chr3R 28407808 28407882 25 161 8.0 8.0 8.0 2.8 235 chr3R 28407647 intergenic not near genes chr3R 28407764 intergenic not near genes chr3R 28407882 intergenic not near genes chr3R_25_28405001 chr3R_28405001 CanS-SH 2490 chr3R 28425176 28425204 chr3R 28425330 28425358 8 154 11.5 7.5 9.5 0.8 182 chr3R 28425176 intron beat-VI + chr3R 28425267 intron beat-VI + chr3R 28425358 intron beat-VI + chr3R_8_28425001 chr3R_28425001 CanS-SH 2491 chr3R 28478370 28478432 chr3R 28478526 28478588 5 156 6.0 12.5 9.2 0.5 218 chr3R 28478370 intergenic not near genes chr3R 28478479 intergenic not near genes chr3R 28478588 intergenic not near genes chr3R_5_28475001 chr3R_28475001 CanS-SH 2492 chr3R 28479080 28479165 chr3R 28479238 28479323 15 158 7.0 10.0 8.5 1.6 243 chr3R 28479080 intergenic not near genes chr3R 28479202 intergenic not near genes chr3R 28479323 intergenic not near genes chr3R_15_28475001 chr3R_28475001 CanS-SH 2493 chr3R 28480256 28480324 chr3R 28480411 28480480 18 156 7.5 9.5 8.5 1.9 224 chr3R 28480256 intergenic not near genes chr3R 28480368 intergenic not near genes chr3R 28480480 intergenic not near genes chr3R_18_28480001 chr3R_28480001 CanS-SH 2494 chr3R 28484353 28484432 chr3R 28486195 28486274 46 1842 124.5 116.0 120.2 0.4 1921 chr3R 28484353 intergenic CG1894 + chr3R 28485314 exon CG1894 + chr3R 28486274 intergenic CG1894 + chr3R_46_28485001 chr3R_28485001 CanS-SH 2495 chr3R 28518141 28518209 chr3R 28518297 28518365 29 156 10.0 8.5 9.2 2.8 224 chr3R 28518141 exon Dhc98D + chr3R 28518253 intron Dhc98D + chr3R 28518365 intron Dhc98D + chr3R_29_28515001 chr3R_28515001 CanS-SH 2496 chr3R 28551757 28551777 chr3R 28551915 28551934 6 158 14.0 6.0 10.0 0.5 177 chr3R 28551757 intergenic not near genes chr3R 28551846 intergenic not near genes chr3R 28551934 intergenic not near genes chr3R_6_28550001 chr3R_28550001 CanS-SH 2497 chr3R 28594068 28594102 chr3R 28594222 28594256 6 154 6.5 18.0 12.2 0.5 188 chr3R 28594068 5` UTR CR43440 + chr3R 28594162 5` UTR CR43440 + chr3R 28594256 5` UTR CR43440 + chr3R_6_28590001 chr3R_28590001 CanS-SH 2498 chr3R 28626125 28626191 chr3R 28626300 28626366 14 175 9.5 5.5 7.5 1.6 241 chr3R 28626125 intron CG10011 - chr3R 28626246 intron CG10011 - chr3R 28626366 intron CG10011 - chr3R_14_28625001 chr3R_28625001 CanS-SH 2499 chr3R 28758221 28758226 chr3R 28763913 28763918 roo 6 5692 30.0 0.0 15.0 0.4 5697 chr3R 28758221 exon aqrs - chr3R 28761070 intergenic not near genes chr3R 28763918 intergenic not near genes chr3R_6_28760001 chr3R_28760001 CanS-SH 2500 chr3R 28758249 28758319 chr3R 28771331 28771401 Stalker4 12 13082 6.5 7.0 6.8 1.5 13152 chr3R 28758249 intergenic aqrs - chr3R 28764825 intergenic not near genes chr3R 28771401 intergenic not near genes chr3R_12_28760001 chr3R_28760001 CanS-SH 2501 chr3R 28763902 28763913 chr3R 28771420 28771431 Stalker4 9 7518 0.0 19.5 9.8 0.8 7529 chr3R 28763902 intergenic not near genes chr3R 28767666 intergenic not near genes chr3R 28771431 intergenic not near genes chr3R_9_28765001 chr3R_28765001 CanS-SH 2502 chr3R 28792784 28792817 chr3R 28797965 28797998 jockey 10 5181 8.0 7.5 7.8 1.1 5214 chr3R 28792784 intergenic not near genes chr3R 28795391 intergenic not near genes chr3R 28797998 intergenic not near genes chr3R_10_28795001 chr3R_28795001 CanS-SH 2503 chr3R 28807712 28807720 chr3R 28807869 28807877 5 157 5.5 9.5 7.5 0.6 165 chr3R 28807712 intergenic CheB98a +,wdn - chr3R 28807794 intergenic wdn -,CheB98a + chr3R 28807877 intergenic wdn -,CheB98a + chr3R_5_28805001 chr3R_28805001 CanS-SH 2504 chr3R 28811626 28811633 chr3R 28811784 28811791 4 158 11.0 0.5 5.8 0.6 165 chr3R 28811626 intergenic wdn -,CG1646 + chr3R 28811708 intergenic wdn -,CG1646 + chr3R 28811791 intergenic CG1646 +,wdn - chr3R_4_28810001 chr3R_28810001 CanS-SH 2505 chr3R 28926315 28926343 chr3R 28926562 28926590 8 247 10.0 14.5 12.2 0.6 275 chr3R 28926315 exon CG14521 - chr3R 28926452 intron CG14521 - chr3R 28926590 intron CG14521 - chr3R_8_28925001 chr3R_28925001 CanS-SH 2506 chr3R 28971104 28971178 chr3R 28971260 28971333 24 156 8.0 9.5 8.8 2.4 229 chr3R 28971104 5` UTR CR45669 + chr3R 28971218 5` UTR CR45669 + chr3R 28971333 5` UTR CR45669 + chr3R_24_28970001 chr3R_28970001 CanS-SH 2507 chr3R 29023172 29023233 chr3R 29023351 29023412 24 179 11.0 12.0 11.5 1.9 240 chr3R 29023172 5` UTR CR45567 + chr3R 29023292 5` UTR CR45567 + chr3R 29023412 5` UTR CR45567 + chr3R_24_29020001 chr3R_29020001 CanS-SH 2508 chr3R 29048366 29048400 chr3R 29048587 29048621 9 221 18.0 6.5 12.2 0.7 255 chr3R 29048366 3` UTR Pkc98E + chr3R 29048494 3` UTR Pkc98E + chr3R 29048621 3` UTR Pkc98E + chr3R_9_29045001 chr3R_29045001 CanS-SH 2509 chr3R 29067559 29067642 chr3R 29067782 29067868 11 224 6.5 10.0 8.2 1.2 309 chr3R 29067559 intron CG11873 + chr3R 29067714 intron CG11873 + chr3R 29067868 intron CG11873 + chr3R_11_29065001 chr3R_29065001 CanS-SH 2510 chr3R 29079312 29079344 chr3R 29080759 29080791 NOF 9 1447 9.5 5.0 7.2 1.1 1479 chr3R 29079312 intron CG11873 + chr3R 29080052 intron CG11873 + chr3R 29080791 intron CG11873 + chr3R_9_29080001 chr3R_29080001 CanS-SH 2511 chr3R 29081438 29081480 chr3R 29081601 29081644 13 164 8.0 10.0 9.0 1.3 206 chr3R 29081438 intron CG11873 + chr3R 29081541 intron CG11873 + chr3R 29081644 intron CG11873 + chr3R_13_29080001 chr3R_29080001 CanS-SH 2512 chr3R 29083091 29083133 chr3R 29083634 29083676 17 543 14.0 10.0 12.0 1.3 585 chr3R 29083091 intron CG11873 + chr3R 29083384 intron CG11873 + chr3R 29083676 intron CG11873 + chr3R_17_29080001 chr3R_29080001 CanS-SH 2513 chr3R 29193330 29193367 chr3R 29193530 29193567 13 200 11.5 12.0 11.8 1.0 237 chr3R 29193330 intron CG14509 - chr3R 29193448 intron CG14509 - chr3R 29193567 intron CG14509 - chr3R_13_29190001 chr3R_29190001 CanS-SH 2514 chr3R 29213004 29213079 chr3R 29213162 29213237 23 158 8.0 10.5 9.2 2.3 233 chr3R 29213004 intergenic not near genes chr3R 29213120 intergenic not near genes chr3R 29213237 intergenic not near genes chr3R_23_29210001 chr3R_29210001 CanS-SH 2515 chr3R 29237224 29237272 chr3R 29239320 29239368 5 2096 39.5 10.0 24.8 0.2 2144 chr3R 29237224 exon CG11951 - chr3R 29238296 intron CG11951 - chr3R 29239368 intron CG31427 - chr3R_5_29235001 chr3R_29235001 CanS-SH 2516 chr3R 29239195 29239203 chr3R 29245561 29245569 5 6366 0.0 44.0 22.0 0.2 6374 chr3R 29239195 exon CG31427 - chr3R 29242382 exon CG31445 - chr3R 29245569 exon SP1029 - chr3R_5_29240001 chr3R_29240001 CanS-SH 2517 chr3R 29237523 29237536 chr3R 29239356 29239369 7 1833 32.0 10.0 21.0 0.3 1846 chr3R 29237523 exon CG11951 - chr3R 29238446 intron CG11951 - chr3R 29239369 intron CG31427 - chr3R_7_29235001 chr3R_29235001 CanS-SH 2518 chr3R 29236581 29236583 chr3R 29246652 29246654 4 10071 19.5 14.5 17.0 0.2 10073 chr3R 29236581 exon CG11951 - chr3R 29241618 intron CG31445 - chr3R 29246654 exon SP1029 - chr3R_4_29240001 chr3R_29240001 CanS-SH 2519 chr3R 29249844 29249905 chr3R 29250009 29250070 24 165 9.0 17.0 13.0 1.7 226 chr3R 29249844 intron SP1029 - chr3R 29249957 intron SP1029 - chr3R 29250070 intron SP1029 - chr3R_24_29245001 chr3R_29245001 CanS-SH 2520 chr3R 29264117 29264213 chr3R 29264294 29264390 9 177 0.0 8.0 4.0 1.8 273 chr3R 29264117 intergenic not near genes chr3R 29264254 intergenic not near genes chr3R 29264390 intergenic not near genes chr3R_9_29260001 chr3R_29260001 CanS-SH 2521 chr3R 29319755 29319777 chr3R 29320149 29320171 jockey 10 394 18.5 7.0 12.8 0.7 416 chr3R 29319755 intergenic Cnx99A - chr3R 29319963 intergenic Cnx99A - chr3R 29320171 intergenic not near genes chr3R_10_29315001 chr3R_29315001 CanS-SH 2522 chr3R 29330860 29330873 chr3R 29331011 29331023 6 151 7.5 0.0 3.8 1.2 163 chr3R 29330860 intergenic not near genes chr3R 29330942 intergenic not near genes chr3R 29331023 intergenic not near genes chr3R_6_29330001 chr3R_29330001 CanS-SH 2523 chr3R 29389340 29389366 chr3R 29389504 29389530 4 164 3.5 23.5 13.5 0.3 190 chr3R 29389340 intron Ptp99A + chr3R 29389435 intron Ptp99A + chr3R 29389530 intron Ptp99A + chr3R_4_29385001 chr3R_29385001 CanS-SH 2524 chr3R 29406554 29406585 chr3R 29407915 29407946 jockey 10 1361 16.0 10.5 13.2 0.7 1392 chr3R 29406554 intron Ptp99A + chr3R 29407250 intron Ptp99A + chr3R 29407946 intron Ptp99A + chr3R_10_29405001 chr3R_29405001 CanS-SH 2525 chr3R 29471942 29472030 chr3R 29472109 29472198 25 168 3.0 6.5 4.8 4.3 256 chr3R 29471942 intron Ptp99A + chr3R 29472070 intron Ptp99A + chr3R 29472198 intron Ptp99A + chr3R_25_29470001 chr3R_29470001 CanS-SH 2526 chr3R 29539380 29539384 chr3R 29539531 29539535 5 151 14.0 0.0 7.0 0.6 155 chr3R 29539380 intergenic not near genes chr3R 29539458 intergenic not near genes chr3R 29539535 intergenic not near genes chr3R_5_29535001 chr3R_29535001 CanS-SH 2527 chr3R 29550186 29550196 chr3R 29550342 29550352 5 156 0.0 4.5 2.2 1.6 166 chr3R 29550186 intergenic not near genes chr3R 29550269 intergenic not near genes chr3R 29550352 intergenic not near genes chr3R_5_29550001 chr3R_29550001 CanS-SH 2528 chr3R 29550249 29550283 chr3R 29550405 29550439 4 156 1.5 9.5 5.5 0.6 190 chr3R 29550249 intergenic not near genes chr3R 29550344 intergenic not near genes chr3R 29550439 intergenic not near genes chr3R_4_29550001 chr3R_29550001 CanS-SH 2529 chr3R 29565705 29565755 chr3R 29565858 29565908 21 153 18.0 7.5 12.8 1.5 203 chr3R 29565705 intergenic Dr + chr3R 29565806 intergenic not near genes chr3R 29565908 intergenic not near genes chr3R_21_29565001 chr3R_29565001 CanS-SH 2530 chr3R 29576699 29576997 chr3R 29576875 29577153 31 159 6.5 6.5 6.5 4.1 454 chr3R 29576699 intergenic not near genes chr3R 29576926 intergenic not near genes chr3R 29577153 intergenic not near genes chr3R_31_29575001 chr3R_29575001 CanS-SH 2531 chr3R 29647096 29647167 chr3R 29647255 29647326 29 159 5.5 12.5 9.0 2.9 230 chr3R 29647096 intron Dop1R2 - chr3R 29647211 intron Dop1R2 - chr3R 29647326 intron Dop1R2 - chr3R_29_29645001 chr3R_29645001 CanS-SH 2532 chr3R 29738201 29738242 chr3R 29739743 29739784 hobo 15 1542 17.5 7.5 12.5 1.1 1583 chr3R 29738201 intergenic CG1969 +,CG7598 + chr3R 29738992 intron CG1969 + chr3R 29739784 5` UTR CG1969 + chr3R_15_29735001 chr3R_29735001 CanS-SH 2533 chr3R 29760299 29760344 chr3R 29761575 29761619 pogo 22 1276 20.0 0.0 10.0 2.0 1320 chr3R 29760299 intergenic not near genes chr3R 29760959 intergenic not near genes chr3R 29761619 intergenic not near genes chr3R_22_29760001 chr3R_29760001 CanS-SH 2534 chr3R 29881955 29881994 chr3R 29891187 29891226 roo 16 9232 15.5 9.5 12.5 1.2 9271 chr3R 29881955 intron CG31038 + chr3R 29886590 intron CG31038 + chr3R 29891226 intron CG31038 + chr3R_16_29885001 chr3R_29885001 CanS-SH 2535 chr3R 29963414 29963467 chr3R 29963591 29963644 12 177 10.5 0.0 5.2 1.9 230 chr3R 29963414 intron TkR99D - chr3R 29963529 intron TkR99D - chr3R 29963644 intron TkR99D - chr3R_12_29960001 chr3R_29960001 CanS-SH 2536 chr3R 29965986 29966036 chr3R 29966141 29966191 13 155 13.0 11.0 12.0 1.0 205 chr3R 29965986 intron TkR99D - chr3R 29966088 intron TkR99D - chr3R 29966191 intron TkR99D - chr3R_13_29965001 chr3R_29965001 CanS-SH 2537 chr3R 30028160 30028209 chr3R 30028330 30028379 10 170 17.5 5.0 11.2 0.8 219 chr3R 30028160 intron Axn + chr3R 30028270 intron Axn + chr3R 30028379 intron Axn + chr3R_10_30025001 chr3R_30025001 CanS-SH 2538 chr3R 30051226 30051303 chr3R 30051381 30051457 17 155 7.0 10.5 8.8 1.7 231 chr3R 30051226 intron,intron CG15528 -,CR44046 + chr3R 30051342 intron,intron CG15528 -,CR44046 + chr3R 30051457 intron,intron CG15528 -,CR44046 + chr3R_17_30050001 chr3R_30050001 CanS-SH 2539 chr3R 30075500 30075540 chr3R 30075664 30075704 9 164 9.0 8.0 8.5 0.9 204 chr3R 30075500 intron sima + chr3R 30075602 intron sima + chr3R 30075704 intron sima + chr3R_9_30075001 chr3R_30075001 CanS-SH 2540 chr3R 30081788 30081877 chr3R 30081940 30082029 14 152 6.0 8.0 7.0 1.8 241 chr3R 30081788 intron sima + chr3R 30081908 intron sima + chr3R 30082029 intron sima + chr3R_14_30080001 chr3R_30080001 CanS-SH 2541 chr3R 30082926 30083008 chr3R 30083077 30083159 15 151 5.0 6.5 5.8 2.2 233 chr3R 30082926 intron sima + chr3R 30083042 intron sima + chr3R 30083159 intron sima + chr3R_15_30080001 chr3R_30080001 CanS-SH 2542 chr3R 30084782 30084813 chr3R 30086326 30086357 hobo 14 1544 12.0 5.5 8.8 1.4 1575 chr3R 30084782 intron sima + chr3R 30085570 intron sima + chr3R 30086357 intron sima + chr3R_14_30085001 chr3R_30085001 CanS-SH 2543 chr3R 30097414 30097602 chr3R 30097570 30097816 42 178 0.0 0.0 0.0 42.0 402 chr3R 30097414 intron sima + chr3R 30097615 intron sima + chr3R 30097816 intron sima + chr3R_42_30095001 chr3R_30095001 CanS-SH 2544 chr3R 30238701 30238737 chr3R 30239940 30239976 1360 19 1239 14.0 8.5 11.2 1.6 1275 chr3R 30238701 intergenic not near genes chr3R 30239338 intergenic not near genes chr3R 30239976 intergenic not near genes chr3R_19_30235001 chr3R_30235001 CanS-SH 2545 chr3R 30266243 30266275 chr3R 30266903 30266935 16 660 14.5 8.0 11.2 1.3 692 chr3R 30266243 intergenic not near genes chr3R 30266589 intergenic not near genes chr3R 30266935 intergenic not near genes chr3R_16_30265001 chr3R_30265001 CanS-SH 2546 chr3R 30268180 30268268 chr3R 30268334 30268421 36 153 6.0 11.5 8.8 3.7 241 chr3R 30268180 intergenic not near genes chr3R 30268300 intergenic not near genes chr3R 30268421 intergenic not near genes chr3R_36_30265001 chr3R_30265001 CanS-SH 2547 chr3R 30315563 30315617 chr3R 30315718 30315772 22 155 11.0 13.0 12.0 1.7 209 chr3R 30315563 intron hdc + chr3R 30315668 intron hdc + chr3R 30315772 intron hdc + chr3R_22_30315001 chr3R_30315001 CanS-SH 2548 chr3R 30317328 30317346 chr3R 30324995 30325013 roo 6 7667 0.0 17.5 8.8 0.6 7685 chr3R 30317328 intron hdc + chr3R 30321170 intron hdc + chr3R 30325013 intron hdc + chr3R_6_30320001 chr3R_30320001 CanS-SH 2549 chr3R 30375477 30375568 chr3R 30383175 30383266 412 6 7698 7.0 11.0 9.0 0.6 7789 chr3R 30375477 intergenic not near genes chr3R 30379372 intergenic not near genes chr3R 30383266 intergenic not near genes chr3R_6_30375001 chr3R_30375001 CanS-SH 2550 chr3R 30396144 30396190 chr3R 30404486 30404531 roo 5 8342 20.5 7.0 13.8 0.3 8387 chr3R 30396144 intergenic not near genes chr3R 30400338 intergenic not near genes chr3R 30404531 5` UTR CR45570 + chr3R_5_30400001 chr3R_30400001 CanS-SH 2551 chr3R 30456329 30456411 chr3R 30456484 30456566 23 155 8.5 4.5 6.5 3.1 237 chr3R 30456329 intergenic CG2224 -,aralar1 - chr3R 30456448 3` UTR CG2224 - chr3R 30456566 3` UTR CG2224 - chr3R_23_30455001 chr3R_30455001 CanS-SH 2552 chr3R 30480409 30480447 chr3R 30482952 30482990 jockey 11 2543 12.5 8.5 10.5 1.0 2581 chr3R 30480409 intron PH4alphaEFB + chr3R 30481700 intron PH4alphaEFB + chr3R 30482990 intron PH4alphaEFB + chr3R_11_30480001 chr3R_30480001 CanS-SH 2553 chr3R 30517087 30517179 chr3R 30517251 30517343 7 164 10.5 8.5 9.5 0.7 256 chr3R 30517087 3` UTR jdp - chr3R 30517215 3` UTR jdp - chr3R 30517343 3` UTR jdp - chr3R_7_30515001 chr3R_30515001 CanS-SH 2554 chr3R 30527913 30528005 chr3R 30528107 30528200 18 195 7.5 9.0 8.2 2.0 287 chr3R 30527913 intergenic CR45552 - chr3R 30528056 intergenic CR45552 - chr3R 30528200 intergenic CR45552 - chr3R_18_30525001 chr3R_30525001 CanS-SH 2555 chr3R 30544671 30544736 chr3R 30544838 30544903 16 167 13.0 11.0 12.0 1.2 232 chr3R 30544671 intron tmod + chr3R 30544787 intron tmod + chr3R 30544903 intron tmod + chr3R_16_30540001 chr3R_30540001 CanS-SH 2556 chr3R 30559220 30559237 chr3R 30559377 30559394 4 157 5.5 15.0 10.2 0.4 174 chr3R 30559220 intron,intron tmod +,CG34155 - chr3R 30559307 intron,intron tmod +,CG34155 - chr3R 30559394 intron,intron tmod +,CG34155 - chr3R_4_30555001 chr3R_30555001 CanS-SH 2557 chr3R 30562920 30563003 chr3R 30563080 30563163 21 160 11.0 6.5 8.8 2.1 243 chr3R 30562920 intron tmod + chr3R 30563042 intron tmod + chr3R 30563163 intron tmod + chr3R_21_30560001 chr3R_30560001 CanS-SH 2558 chr3R 30571631 30571713 chr3R 30571784 30571868 12 155 6.0 3.5 4.8 2.1 237 chr3R 30571631 intron tmod + chr3R 30571750 intron tmod + chr3R 30571868 exon tmod + chr3R_12_30570001 chr3R_30570001 CanS-SH 2559 chr3R 30641630 30641715 chr3R 30641784 30641869 17 154 8.0 5.5 6.8 2.2 239 chr3R 30641630 intergenic not near genes chr3R 30641750 intergenic not near genes chr3R 30641869 intergenic not near genes chr3R_17_30640001 chr3R_30640001 CanS-SH 2560 chr3R 30664719 30664806 chr3R 30664889 30664957 10 160 6.5 0.0 3.2 2.4 238 chr3R 30664719 intergenic CR45191 + chr3R 30664838 5` UTR CR45191 + chr3R 30664957 5` UTR CR45191 + chr3R_10_30660001 chr3R_30660001 CanS-SH 2561 chr3R 30679474 30679499 chr3R 30687018 30687043 blood 12 7544 16.0 9.0 12.5 0.9 7569 chr3R 30679474 intergenic not near genes chr3R 30683258 intergenic not near genes chr3R 30687043 intergenic not near genes chr3R_12_30680001 chr3R_30680001 CanS-SH 2562 chr3R 30689441 30689485 chr3R 30689605 30689649 13 164 5.5 8.0 6.8 1.7 208 chr3R 30689441 intergenic not near genes chr3R 30689545 intergenic not near genes chr3R 30689649 intergenic not near genes chr3R_13_30685001 chr3R_30685001 CanS-SH 2563 chr3R 30700796 30700879 chr3R 30700994 30701086 12 201 5.0 0.5 2.8 3.2 290 chr3R 30700796 intergenic not near genes chr3R 30700941 intergenic not near genes chr3R 30701086 intergenic not near genes chr3R_12_30700001 chr3R_30700001 CanS-SH 2564 chr3R 30736606 30736643 chr3R 30736917 30736954 12 311 11.0 6.5 8.8 1.2 348 chr3R 30736606 intergenic not near genes chr3R 30736780 intergenic not near genes chr3R 30736954 intergenic not near genes chr3R_12_30735001 chr3R_30735001 CanS-SH 2565 chr3R 30818749 30818785 chr3R 30820389 30820425 1360 15 1640 18.0 10.0 14.0 1.0 1676 chr3R 30818749 intron cindr + chr3R 30819587 intron cindr + chr3R 30820425 intron cindr + chr3R_15_30815001 chr3R_30815001 CanS-SH 2566 chr3R 30821333 30821418 chr3R 30821496 30821573 9 158 6.0 6.0 6.0 1.3 240 chr3R 30821333 intron cindr + chr3R 30821453 intron cindr + chr3R 30821573 intron cindr + chr3R_9_30820001 chr3R_30820001 CanS-SH 2567 chr3R 30823338 30823413 chr3R 30823509 30823584 13 171 6.0 6.0 6.0 1.9 246 chr3R 30823338 intron cindr + chr3R 30823461 intron cindr + chr3R 30823584 intron cindr + chr3R_13_30820001 chr3R_30820001 CanS-SH 2568 chr3R 30831643 30831687 chr3R 30831794 30831838 14 151 5.0 18.0 11.5 1.1 195 chr3R 30831643 intron CG15544 + chr3R 30831740 intron CG15544 + chr3R 30831838 intron CG15544 + chr3R_14_30830001 chr3R_30830001 CanS-SH 2569 chr3R 30855781 30855802 chr3R 30855933 30855954 9 152 0.0 15.0 7.5 1.1 173 chr3R 30855781 intergenic not near genes chr3R 30855868 intergenic not near genes chr3R 30855954 intergenic not near genes chr3R_9_30855001 chr3R_30855001 CanS-SH 2570 chr3R 30859331 30859425 chr3R 30859484 30859578 31 153 8.0 7.5 7.8 3.5 247 chr3R 30859331 intergenic not near genes chr3R 30859454 intergenic not near genes chr3R 30859578 intergenic not near genes chr3R_31_30855001 chr3R_30855001 CanS-SH 2571 chr3R 30927750 30927771 chr3R 30927908 30927928 9 158 9.0 12.5 10.8 0.8 178 chr3R 30927750 intron Ptx1 + chr3R 30927839 intron Ptx1 + chr3R 30927928 intron Ptx1 + chr3R_9_30925001 chr3R_30925001 CanS-SH 2572 chr3R 30948015 30948051 chr3R 30948281 30948317 10 266 15.0 9.5 12.2 0.8 302 chr3R 30948015 intergenic not near genes chr3R 30948166 intergenic not near genes chr3R 30948317 intergenic not near genes chr3R_10_30945001 chr3R_30945001 CanS-SH 2573 chr3R 30980776 30980822 chr3R 30980927 30980973 9 151 6.5 8.0 7.2 1.1 197 chr3R 30980776 intron 5-HT7 - chr3R 30980874 intron 5-HT7 - chr3R 30980973 intron 5-HT7 - chr3R_9_30980001 chr3R_30980001 CanS-SH 2574 chr3R 30982531 30982607 chr3R 30982698 30982774 19 167 7.0 11.0 9.0 1.9 243 chr3R 30982531 intron 5-HT7 - chr3R 30982652 intron 5-HT7 - chr3R 30982774 intron 5-HT7 - chr3R_19_30980001 chr3R_30980001 CanS-SH 2575 chr3R 31042051 31042125 chr3R 31042213 31042287 26 162 8.5 7.0 7.8 3.0 236 chr3R 31042051 exon CanA1 + chr3R 31042169 intron CanA1 + chr3R 31042287 exon CanA1 + chr3R_26_31040001 chr3R_31040001 CanS-SH 2576 chr3R 31055447 31055517 chr3R 31055625 31055695 10 178 7.5 11.5 9.5 1.0 248 chr3R 31055447 3` UTR dco - chr3R 31055571 3` UTR dco - chr3R 31055695 3` UTR dco - chr3R_10_31055001 chr3R_31055001 CanS-SH 2577 chr3R 31074167 31074261 chr3R 31081840 31081941 springer 15 7676 6.0 5.5 5.8 2.2 7774 chr3R 31074167 intron Sox100B + chr3R 31078054 intron Sox100B + chr3R 31081941 exon Sox100B + chr3R_15_31075001 chr3R_31075001 CanS-SH 2578 chr3R 31137079 31137173 chr3R 31137237 31137328 39 156 10.0 6.0 8.0 4.3 249 chr3R 31137079 intron Gycbeta100B + chr3R 31137204 intron Gycbeta100B + chr3R 31137328 intron Gycbeta100B + chr3R_39_31135001 chr3R_31135001 CanS-SH 2579 chr3R 31279310 31279394 chr3R 31285576 31285659 diver 13 6266 11.0 7.0 9.0 1.3 6349 chr3R 31279310 intergenic not near genes chr3R 31282484 intergenic not near genes chr3R 31285659 intergenic not near genes chr3R_13_31280001 chr3R_31280001 CanS-SH 2580 chr3R 31330346 31330385 chr3R 31335636 31335674 copia 8 5290 11.0 3.0 7.0 1.0 5328 chr3R 31330346 intron CG34347 + chr3R 31333010 intron CG34347 + chr3R 31335674 intron CG34347 + chr3R_8_31330001 chr3R_31330001 CanS-SH 2581 chr3R 31426830 31426892 chr3R 31426997 31427059 26 167 9.0 12.0 10.5 2.3 229 chr3R 31426830 intron Gprk2 + chr3R 31426944 intron Gprk2 + chr3R 31427059 intron Gprk2 + chr3R_26_31425001 chr3R_31425001 CanS-SH 2582 chr3R 31435292 31435385 chr3R 31435519 31435612 21 227 7.5 5.0 6.2 2.9 320 chr3R 31435292 intron Gprk2 + chr3R 31435452 intron Gprk2 + chr3R 31435612 intron Gprk2 + chr3R_21_31435001 chr3R_31435001 CanS-SH 2583 chr3R 31437563 31437635 chr3R 31437832 31437904 7 269 6.0 6.5 6.2 1.0 341 chr3R 31437563 intron Gprk2 + chr3R 31437734 intron Gprk2 + chr3R 31437904 intron Gprk2 + chr3R_7_31435001 chr3R_31435001 CanS-SH 2584 chr3R 31452725 31452784 chr3R 31452886 31452945 21 161 9.0 5.0 7.0 2.6 220 chr3R 31452725 intron Gprk2 + chr3R 31452835 intron Gprk2 + chr3R 31452945 intron Gprk2 + chr3R_21_31450001 chr3R_31450001 CanS-SH 2585 chr3R 31496845 31496854 chr3R 31497012 31497021 4 167 29.5 28.5 29.0 0.1 176 chr3R 31496845 intergenic not near genes chr3R 31496933 intergenic not near genes chr3R 31497021 intergenic not near genes chr3R_4_31495001 chr3R_31495001 CanS-SH 2586 chr3R 31561719 31561790 chr3R 31561884 31561957 19 166 10.0 9.0 9.5 1.8 238 chr3R 31561719 exon nyo + chr3R 31561838 intron nyo + chr3R 31561957 exon nyo + chr3R_19_31560001 chr3R_31560001 CanS-SH 2587 chr3R 31627827 31627882 chr3R 31628050 31628105 14 223 7.5 9.0 8.2 1.5 278 chr3R 31627827 intron kek6 + chr3R 31627966 intron kek6 + chr3R 31628105 intron kek6 + chr3R_14_31625001 chr3R_31625001 CanS-SH 2588 chr3R 31630006 31630083 chr3R 31630186 31630263 14 180 5.5 12.0 8.8 1.4 257 chr3R 31630006 intron kek6 + chr3R 31630134 intron kek6 + chr3R 31630263 intron kek6 + chr3R_14_31630001 chr3R_31630001 CanS-SH 2589 chr3R 31691490 31691505 chr3R 31696331 31696346 Doc 6 4841 13.0 13.0 13.0 0.4 4856 chr3R 31691490 intergenic not near genes chr3R 31693918 intergenic not near genes chr3R 31696346 intergenic not near genes chr3R_6_31690001 chr3R_31690001 CanS-SH 2590 chr3R 31858102 31858199 chr3R 31858277 31858377 13 175 0.5 8.0 4.2 2.5 275 chr3R 31858102 intron heph - chr3R 31858240 intron heph - chr3R 31858377 intron heph - chr3R_13_31855001 chr3R_31855001 CanS-SH 2591 chr3R 31961279 31961348 chr3R 31961436 31961506 14 158 8.0 1.5 4.8 2.4 227 chr3R 31961279 intron heph - chr3R 31961392 intron heph - chr3R 31961506 intron heph - chr3R_14_31960001 chr3R_31960001 CanS-SH 2592 chr3R 31976515 31976521 chr3R 31976837 31976843 4 322 8.0 5.5 6.8 0.5 328 chr3R 31976515 intron heph - chr3R 31976679 intron heph - chr3R 31976843 intron heph - chr3R_4_31975001 chr3R_31975001 CanS-SH 2593 chr3R 31997933 31997970 chr3R 32005478 32005515 blood 11 7545 12.0 9.5 10.8 0.9 7582 chr3R 31997933 intron heph - chr3R 32001724 intron heph - chr3R 32005515 intron heph - chr3R_11_32000001 chr3R_32000001 CanS-SH 2594 chr4 76441 76470 chr4 81959 81988 I-element 7 5518 13.5 7.5 10.5 0.6 5547 chr4 76441 intron pan + chr4 79214 intron pan + chr4 81988 intron pan + chr4_7_75001 chr4_75001 CanS-SH 2595 chr4 280739 280766 chr4 281444 281471 7 705 25.5 27.5 26.5 0.3 732 chr4 280739 intron Syt7 - chr4 281105 intron Syt7 - chr4 281471 intron Syt7 - chr4_7_280001 chr4_280001 CanS-SH 2596 chr4 314446 314509 chr4 314599 314662 10 153 25.5 21.0 23.2 0.4 216 chr4 314446 intergenic Zip102B -,CG32850 + chr4 314554 intergenic CG32850 +,Zip102B - chr4 314662 intergenic CG32850 + chr4_10_310001 chr4_310001 CanS-SH 2597 chr4 319943 319964 chr4 328194 328215 Stalker2 7 8251 14.5 9.0 11.8 0.5 8272 chr4 319943 3` UTR CG32850 + chr4 324079 intron CG32850 + chr4 328215 3` UTR,3` UTR CG32850 +,PMCA - chr4_7_320001 chr4_320001 CanS-SH 2598 chr4 368630 368662 chr4 368837 368869 6 207 26.5 19.0 22.8 0.3 239 chr4 368630 intron Hcf + chr4 368750 intron Hcf + chr4 368869 intron Hcf + chr4_6_365001 chr4_365001 CanS-SH 2599 chr4 419525 419565 chr4 419681 419721 6 156 44.5 36.5 40.5 0.1 196 chr4 419525 intergenic not near genes chr4 419623 intergenic not near genes chr4 419721 intergenic not near genes chr4_6_415001 chr4_415001 CanS-SH 2600 chr4 671550 671580 chr4 680208 680238 Tirant 15 8658 17.5 13.0 15.2 0.9 8688 chr4 671550 intron CG11360 + chr4 675894 intron CG11360 + chr4 680238 intron CG11360 + chr4_15_675001 chr4_675001 CanS-SH 2601 chr4 959559 959600 chr4 959813 959854 12 254 17.0 5.0 11.0 1.0 295 chr4 959559 intergenic CR44030 +,CR45201 - chr4 959706 5` UTR CR44030 + chr4 959854 5` UTR CR44030 + chr4_12_955001 chr4_955001 CanS-SH 2602 chr4 972439 972514 chr4 972596 972671 19 157 11.0 14.5 12.8 1.4 232 chr4 972439 intron fuss - chr4 972555 intron fuss - chr4 972671 intron fuss - chr4_19_970001 chr4_970001 CanS-SH 2603 chrX 295791 295830 chrX 303486 303525 412 12 7695 10.0 7.0 8.5 1.3 7734 chrX 295791 intron CG3777 + chrX 299658 intron CG3777 + chrX 303525 intron CG3777 + chrX_12_295001 chrX_295001 CanS-SH 2604 chrX 318417 318443 chrX 323578 323604 flea 11 5161 13.0 10.5 11.8 0.9 5187 chrX 318417 intron,intron CG3777 +,CG32816 - chrX 321010 intron,intron CG3777 +,CG32816 - chrX 323604 intron,intron CG3777 +,CG32816 - chrX_11_320001 chrX_320001 CanS-SH 2605 chrX 380913 380977 chrX 381072 381136 20 159 6.0 4.5 5.2 3.2 223 chrX 380913 intron CG32816 - chrX 381024 intron CG32816 - chrX 381136 intron CG32816 - chrX_20_380001 chrX_380001 CanS-SH 2606 chrX 428362 428393 chrX 434621 434653 3S18 10 6260 19.0 7.5 13.2 0.7 6291 chrX 428362 intron CG32816 - chrX 431508 intron CG32816 - chrX 434653 intron CG32816 - chrX_10_430001 chrX_430001 CanS-SH 2607 chrX 551369 551392 chrX 559006 559029 412 9 7637 12.0 7.0 9.5 0.9 7660 chrX 551369 intron Appl + chrX 555199 intron Appl + chrX 559029 intron Appl + chrX_9_555001 chrX_555001 CanS-SH 2608 chrX 706715 706759 chrX 707162 707206 12 447 5.5 3.5 4.5 2.2 491 chrX 706715 intron sdk + chrX 706960 intron sdk + chrX 707206 intron sdk + chrX_12_705001 chrX_705001 CanS-SH 2609 chrX 732274 732346 chrX 732431 732503 23 157 4.0 7.5 5.8 3.4 229 chrX 732274 intron sdk + chrX 732388 intron sdk + chrX 732503 intron sdk + chrX_23_730001 chrX_730001 CanS-SH 2610 chrX 812208 812244 chrX 817914 817950 297 10 5706 10.5 9.5 10.0 0.9 5742 chrX 812208 intron CG43867 - chrX 815079 intron CG43867 - chrX 817950 intron CG43867 - chrX_10_815001 chrX_815001 CanS-SH 2611 chrX 906627 906720 chrX 908491 908584 S-element 17 1864 4.0 5.0 4.5 3.1 1957 chrX 906627 intron CG43867 - chrX 907606 intron CG43867 - chrX 908584 intron CG43867 - chrX_17_905001 chrX_905001 CanS-SH 2612 chrX 918308 918392 chrX 918467 918551 23 159 9.5 5.0 7.2 2.8 243 chrX 918308 intron CG43867 - chrX 918430 intron CG43867 - chrX 918551 intron CG43867 - chrX_23_915001 chrX_915001 CanS-SH 2613 chrX 1033288 1033322 chrX 1040996 1041030 412 4 7708 11.0 4.0 7.5 0.5 7742 chrX 1033288 intron su(w[a]) + chrX 1037159 intron su(w[a]) + chrX 1041030 intron su(w[a]) + chrX_4_1035001 chrX_1035001 CanS-SH 2614 chrX 1051035 1051070 chrX 1051188 1051223 9 153 12.5 14.0 13.2 0.6 188 chrX 1051035 intron CR44779 + chrX 1051129 intron CR44779 + chrX 1051223 intron CR44779 + chrX_9_1050001 chrX_1050001 CanS-SH 2615 chrX 1063698 1063733 chrX 1072566 1072601 roo 10 8868 16.0 6.5 11.2 0.8 8903 chrX 1063698 intron CR44779 + chrX 1068150 intron CR44779 + chrX 1072601 intron CR44779 + chrX_10_1065001 chrX_1065001 CanS-SH 2616 chrX 1357713 1357752 chrX 1367958 1367997 Doc 10 10245 18.0 11.0 14.5 0.6 10284 chrX 1357713 intergenic png - chrX 1362855 intergenic not near genes chrX 1367997 intergenic not near genes chrX_10_1360001 chrX_1360001 CanS-SH 2617 chrX 1419900 1419963 chrX 1420064 1420127 11 164 5.5 10.0 7.8 1.2 227 chrX 1419900 intron futsch + chrX 1420014 intron futsch + chrX 1420127 intron futsch + chrX_11_1420001 chrX_1420001 CanS-SH 2618 chrX 1517982 1518016 chrX 1523459 1523493 jockey 8 5477 9.0 8.0 8.5 0.8 5511 chrX 1517982 intergenic inc + chrX 1520738 intergenic not near genes chrX 1523493 intergenic not near genes chrX_8_1520001 chrX_1520001 CanS-SH 2619 chrX 1712189 1712259 chrX 1712347 1712417 26 158 12.0 7.0 9.5 2.5 228 chrX 1712189 intergenic not near genes chrX 1712303 intergenic not near genes chrX 1712417 intergenic not near genes chrX_26_1710001 chrX_1710001 CanS-SH 2620 chrX 1930474 1930505 chrX 1938120 1938151 opus 12 7646 16.5 11.5 14.0 0.8 7677 chrX 1930474 3` UTR CG11596 + chrX 1934312 intergenic not near genes chrX 1938151 3` UTR CG3857 - chrX_12_1930001 chrX_1930001 CanS-SH 2621 chrX 1954839 1954863 chrX 1962854 1962878 Stalker2 5 8015 8.0 8.5 8.2 0.5 8039 chrX 1954839 intron Hr4 + chrX 1958858 intron Hr4 + chrX 1962878 intron Hr4 + chrX_5_1955001 chrX_1955001 CanS-SH 2622 chrX 1974196 1974255 chrX 1974362 1974421 19 166 13.5 10.0 11.8 1.5 225 chrX 1974196 intron Hr4 + chrX 1974308 intron Hr4 + chrX 1974421 intron Hr4 + chrX_19_1970001 chrX_1970001 CanS-SH 2623 chrX 2146594 2146655 chrX 2146761 2146822 18 167 8.0 7.5 7.8 2.0 228 chrX 2146594 intron Pgd + chrX 2146708 intron Pgd + chrX 2146822 intron Pgd + chrX_18_2145001 chrX_2145001 CanS-SH 2624 chrX 2399777 2399814 chrX 2408205 2408242 roo 20 8428 10.0 11.0 10.5 1.7 8465 chrX 2399777 intergenic not near genes chrX 2404010 intergenic not near genes chrX 2408242 intergenic not near genes chrX_20_2400001 chrX_2400001 CanS-SH 2625 chrX 2429578 2429668 chrX 2429734 2429824 11 156 0.0 5.0 2.5 3.1 246 chrX 2429578 intergenic not near genes chrX 2429701 intergenic not near genes chrX 2429824 intergenic not near genes chrX_11_2425001 chrX_2425001 CanS-SH 2626 chrX 2460981 2461032 chrX 2461145 2461196 15 164 13.0 5.5 9.2 1.5 215 chrX 2460981 intron boi - chrX 2461088 intron boi - chrX 2461196 intron boi - chrX_15_2460001 chrX_2460001 CanS-SH 2627 chrX 2577564 2577571 chrX 2577732 2577739 4 168 15.5 13.0 14.2 0.3 175 chrX 2577564 intron Pdfr + chrX 2577652 exon Pdfr + chrX 2577739 exon Pdfr + chrX_4_2575001 chrX_2575001 CanS-SH 2628 chrX 2578748 2578790 chrX 2578915 2578957 7 167 0.5 7.5 4.0 1.4 209 chrX 2578748 intergenic Pdfr +,Vha36-3 - chrX 2578852 intergenic Pdfr +,Vha36-3 - chrX 2578957 intergenic Vha36-3 -,Pdfr + chrX_7_2575001 chrX_2575001 CanS-SH 2629 chrX 2581169 2581212 chrX 2581492 2581535 8 323 50.5 9.0 29.8 0.3 366 chrX 2581169 intron CG13759 + chrX 2581352 intron CG13759 + chrX 2581535 intron CG13759 + chrX_8_2580001 chrX_2580001 CanS-SH 2630 chrX 2610321 2610362 chrX 2617513 2617554 HMS-Beagle 4 7192 11.0 8.0 9.5 0.4 7233 chrX 2610321 5` UTR CG8636 - chrX 2613938 intergenic not near genes chrX 2617554 intergenic Tsp3A - chrX_4_2610001 chrX_2610001 CanS-SH 2631 chrX 2664325 2664360 chrX 2665546 2665581 1360 8 1221 11.5 6.5 9.0 0.8 1256 chrX 2664325 intron sgg + chrX 2664953 intron sgg + chrX 2665581 intron sgg + chrX_8_2660001 chrX_2660001 CanS-SH 2632 chrX 2793150 2793224 chrX 2795985 2796059 10 2835 29.0 34.5 31.8 0.3 2909 chrX 2793150 intron,intron kirre +,w - chrX 2794604 intron,intron kirre +,w - chrX 2796059 intron,intron kirre +,w - chrX_10_2790001 chrX_2790001 CanS-SH 2633 chrX 2808871 2808917 chrX 2809026 2809072 8 155 6.0 11.5 8.8 0.8 201 chrX 2808871 intron kirre + chrX 2808972 intron kirre + chrX 2809072 intron kirre + chrX_8_2805001 chrX_2805001 CanS-SH 2634 chrX 2844841 2844875 chrX 2852326 2852360 mdg1 10 7485 12.0 8.0 10.0 0.9 7519 chrX 2844841 intron kirre + chrX 2848600 intron kirre + chrX 2852360 intron kirre + chrX_10_2845001 chrX_2845001 CanS-SH 2635 chrX 2888059 2888132 chrX 2888213 2888284 18 153 4.0 10.5 7.2 2.2 225 chrX 2888059 intron kirre + chrX 2888172 intron kirre + chrX 2888284 intron kirre + chrX_18_2885001 chrX_2885001 CanS-SH 2636 chrX 2917065 2917121 chrX 2917220 2917280 10 157 7.0 10.5 8.8 1.0 215 chrX 2917065 intron kirre + chrX 2917172 intron kirre + chrX 2917280 intron kirre + chrX_10_2915001 chrX_2915001 CanS-SH 2637 chrX 2971963 2971995 chrX 2972178 2972210 6 215 6.5 11.5 9.0 0.6 247 chrX 2971963 intron,intron kirre +,rst - chrX 2972086 intron,intron kirre +,rst - chrX 2972210 intron,intron kirre +,rst - chrX_6_2970001 chrX_2970001 CanS-SH 2638 chrX 2986688 2986767 chrX 2986844 2986924 11 156 6.5 7.0 6.8 1.4 236 chrX 2986688 intron kirre + chrX 2986806 intron kirre + chrX 2986924 intron kirre + chrX_11_2985001 chrX_2985001 CanS-SH 2639 chrX 3008787 3008802 chrX 3010090 3010105 7 1303 16.5 26.5 21.5 0.3 1318 chrX 3008787 intron kirre + chrX 3009446 intron kirre + chrX 3010105 intron kirre + chrX_7_3005001 chrX_3005001 CanS-SH 2640 chrX 3009000 3009004 chrX 3010088 3010092 4 1088 19.5 27.0 23.2 0.2 1092 chrX 3009000 intron kirre + chrX 3009546 intron kirre + chrX 3010092 intron kirre + chrX_4_3005001 chrX_3005001 CanS-SH 2641 chrX 3031103 3031172 chrX 3031261 3031330 18 158 7.0 10.5 8.8 1.8 227 chrX 3031103 intron kirre + chrX 3031216 intron kirre + chrX 3031330 intron kirre + chrX_18_3030001 chrX_3030001 CanS-SH 2642 chrX 3057960 3057988 chrX 3058276 3058304 pogo 10 316 16.0 7.0 11.5 0.8 344 chrX 3057960 intron kirre + chrX 3058132 intron kirre + chrX 3058304 intron kirre + chrX_10_3055001 chrX_3055001 CanS-SH 2643 chrX 3103459 3103476 chrX 3103620 3103637 8 161 9.0 0.0 4.5 1.5 178 chrX 3103459 intron kirre + chrX 3103548 intron kirre + chrX 3103637 intron kirre + chrX_8_3100001 chrX_3100001 CanS-SH 2644 chrX 3109402 3109467 chrX 3109554 3109619 14 152 6.0 10.5 8.2 1.5 217 chrX 3109402 intron kirre + chrX 3109510 intron kirre + chrX 3109619 intron kirre + chrX_14_3105001 chrX_3105001 CanS-SH 2645 chrX 3178435 3178444 chrX 3186173 3186182 opus 4 7738 11.0 9.5 10.2 0.4 7747 chrX 3178435 intron dnc + chrX 3182308 intron dnc + chrX 3186182 intron dnc + chrX_4_3180001 chrX_3180001 CanS-SH 2646 chrX 3212564 3212591 chrX 3212724 3212751 5 160 3.5 12.5 8.0 0.6 187 chrX 3212564 intron dnc + chrX 3212658 intron dnc + chrX 3212751 intron dnc + chrX_5_3210001 chrX_3210001 CanS-SH 2647 chrX 3243602 3243644 chrX 3243767 3243809 14 165 13.0 8.5 10.8 1.2 207 chrX 3243602 intron dnc + chrX 3243706 intron dnc + chrX 3243809 intron dnc + chrX_14_3240001 chrX_3240001 CanS-SH 2648 chrX 3260290 3260312 chrX 3260449 3260471 9 159 3.0 3.5 3.2 2.1 181 chrX 3260290 intron dnc + chrX 3260380 intron dnc + chrX 3260471 intron dnc + chrX_9_3260001 chrX_3260001 CanS-SH 2649 chrX 3351759 3351783 chrX 3351920 3351944 6 161 6.0 8.5 7.2 0.7 185 chrX 3351759 intergenic not near genes chrX 3351852 intergenic not near genes chrX 3351944 intergenic not near genes chrX_6_3350001 chrX_3350001 CanS-SH 2650 chrX 3352687 3352739 chrX 3352851 3352903 24 164 11.0 17.5 14.2 1.6 216 chrX 3352687 intergenic not near genes chrX 3352795 intergenic not near genes chrX 3352903 intergenic not near genes chrX_24_3350001 chrX_3350001 CanS-SH 2651 chrX 3374147 3374164 chrX 3374303 3374320 5 156 3.0 12.0 7.5 0.6 173 chrX 3374147 intron,intron CR44999 +,dm + chrX 3374234 intron,intron CR44999 +,dm + chrX 3374320 intron,intron CR44999 +,dm + chrX_5_3370001 chrX_3370001 CanS-SH 2652 chrX 3398272 3398367 chrX 3398423 3398520 13 152 5.0 8.0 6.5 1.7 248 chrX 3398272 intron,intron CR44999 +,CG12535 - chrX 3398396 intron,intron CR44999 +,CG12535 - chrX 3398520 intron,intron CR44999 +,CG12535 - chrX_13_3395001 chrX_3395001 CanS-SH 2653 chrX 3408916 3408945 chrX 3409067 3409096 11 151 8.0 5.5 6.8 1.4 180 chrX 3408916 intron,intron CR44999 +,CG12535 - chrX 3409006 intron,intron CR44999 +,CG12535 - chrX 3409096 intron,intron CR44999 +,CG12535 - chrX_11_3405001 chrX_3405001 CanS-SH 2654 chrX 3414279 3414310 chrX 3414481 3414512 10 202 3.0 0.0 1.5 4.0 233 chrX 3414279 intron,intron CR44999 +,CG12535 - chrX 3414396 intron,intron CR44999 +,CG12535 - chrX 3414512 intron,intron CR44999 +,CG12535 - chrX_10_3410001 chrX_3410001 CanS-SH 2655 chrX 3465743 3465770 chrX 3465902 3465929 10 159 6.5 0.0 3.2 2.4 186 chrX 3465743 intron,3` UTR CR44999 +,CG12206 - chrX 3465836 intron,3` UTR CR44999 +,CG12206 - chrX 3465929 intron,3` UTR CR44999 +,CG12206 - chrX_10_3465001 chrX_3465001 CanS-SH 2656 chrX 3493030 3493066 chrX 3502264 3502300 roo 9 9234 11.0 3.0 7.0 1.1 9270 chrX 3493030 intron,exon CR44999 +,Gas8 - chrX 3497665 intron,intron CR44999 +,Gas8 - chrX 3502300 intron,intron CR44999 +,Gas8 - chrX_9_3495001 chrX_3495001 CanS-SH 2657 chrX 3582655 3582712 chrX 3582813 3582870 17 158 8.0 0.0 4.0 3.4 215 chrX 3582655 intron AstA-R1 + chrX 3582762 intron AstA-R1 + chrX 3582870 intron AstA-R1 + chrX_17_3580001 chrX_3580001 CanS-SH 2658 chrX 3589446 3589502 chrX 3589609 3589664 11 163 3.5 18.0 10.8 0.9 218 chrX 3589446 intron AstA-R1 + chrX 3589555 intron AstA-R1 + chrX 3589664 intron AstA-R1 + chrX_11_3585001 chrX_3585001 CanS-SH 2659 chrX 3597488 3597528 chrX 3619731 3619771 roo 12 22243 17.5 9.0 13.2 0.8 22283 chrX 3597488 intron AstA-R1 + chrX 3608630 intron AstA-R1 + chrX 3619771 intron AstA-R1 + chrX_12_3605001 chrX_3605001 CanS-SH 2660 chrX 3646386 3646419 chrX 3646546 3646580 6 161 4.0 7.5 5.8 0.9 194 chrX 3646386 intron AstA-R1 + chrX 3646483 intron AstA-R1 + chrX 3646580 intron AstA-R1 + chrX_6_3645001 chrX_3645001 CanS-SH 2661 chrX 3713051 3713092 chrX 3713235 3713276 14 184 9.0 7.0 8.0 1.6 225 chrX 3713051 intron Rala - chrX 3713164 intron Rala - chrX 3713276 intron Rala - chrX_14_3710001 chrX_3710001 CanS-SH 2662 chrX 3726705 3726741 chrX 3730177 3730213 NOF 16 3472 0.0 3.0 1.5 6.4 3508 chrX 3726705 intron tlk + chrX 3728459 intron tlk + chrX 3730213 intron tlk + chrX_16_3725001 chrX_3725001 CanS-SH 2663 chrX 3765139 3765147 chrX 4343830 4343838 5 578691 28.5 17.5 23.0 0.2 578699 chrX 3765139 intron tlk + chrX 4054488 intergenic not near genes chrX 4343838 intron norpA + chrX_5_4050001 chrX_4050001 CanS-SH 2664 chrX 3842263 3842295 chrX 3842579 3842611 pogo 14 316 9.0 10.0 9.5 1.3 348 chrX 3842263 intron ec + chrX 3842437 intron ec + chrX 3842611 intron ec + chrX_14_3840001 chrX_3840001 CanS-SH 2665 chrX 3916367 3916458 chrX 3916527 3916618 29 160 8.0 7.5 7.8 3.3 251 chrX 3916367 intron CG42541 - chrX 3916492 intron CG42541 - chrX 3916618 intron CG42541 - chrX_29_3915001 chrX_3915001 CanS-SH 2666 chrX 3976435 3976439 chrX 3976615 3976619 4 180 4.5 15.5 10.0 0.4 184 chrX 3976435 intergenic not near genes chrX 3976527 intergenic not near genes chrX 3976619 intergenic not near genes chrX_4_3975001 chrX_3975001 CanS-SH 2667 chrX 3985462 3985488 chrX 3985613 3985639 9 151 9.0 11.0 10.0 0.8 177 chrX 3985462 intergenic not near genes chrX 3985550 intergenic not near genes chrX 3985639 intergenic not near genes chrX_9_3985001 chrX_3985001 CanS-SH 2668 chrX 4008535 4008576 chrX 4008709 4008750 9 174 9.0 14.5 11.8 0.7 215 chrX 4008535 intergenic not near genes chrX 4008642 intergenic not near genes chrX 4008750 intergenic not near genes chrX_9_4005001 chrX_4005001 CanS-SH 2669 chrX 4021108 4021166 chrX 4021281 4021339 14 173 8.5 5.0 6.8 1.8 231 chrX 4021108 intergenic not near genes chrX 4021224 intergenic not near genes chrX 4021339 intergenic not near genes chrX_14_4020001 chrX_4020001 CanS-SH 2670 chrX 4047409 4047459 chrX 4047597 4047646 12 188 12.5 7.5 10.0 1.1 237 chrX 4047409 intergenic CR45482 - chrX 4047528 intergenic CR45482 - chrX 4047646 3` UTR CR45482 - chrX_12_4045001 chrX_4045001 CanS-SH 2671 chrX 4132602 4132638 chrX 4132845 4132881 10 243 14.0 11.0 12.5 0.7 279 chrX 4132602 3` UTR GlcAT-I + chrX 4132742 3` UTR GlcAT-I + chrX 4132881 intergenic Fas2 -,GlcAT-I + chrX_10_4130001 chrX_4130001 CanS-SH 2672 chrX 4157833 4157869 chrX 4164943 4164979 297 10 7110 9.0 5.0 7.0 1.2 7146 chrX 4157833 intron Fas2 - chrX 4161406 intron Fas2 - chrX 4164979 intron Fas2 - chrX_10_4160001 chrX_4160001 CanS-SH 2673 chrX 4209854 4209907 chrX 4210020 4210072 11 165 0.0 2.5 1.2 5.0 218 chrX 4209854 intergenic not near genes chrX 4209963 intergenic not near genes chrX 4210072 intergenic not near genes chrX_11_4205001 chrX_4205001 CanS-SH 2674 chrX 4212643 4212680 chrX 4212807 4212844 10 164 4.5 3.0 3.8 2.1 201 chrX 4212643 intergenic CG43288 + chrX 4212744 intergenic CG43288 + chrX 4212844 intergenic CG43288 + chrX_10_4210001 chrX_4210001 CanS-SH 2675 chrX 4216267 4216322 chrX 4216421 4216476 19 154 7.0 10.5 8.8 1.9 209 chrX 4216267 intergenic not near genes chrX 4216372 intergenic CG15571 - chrX 4216476 intergenic CG15571 - chrX_19_4215001 chrX_4215001 CanS-SH 2676 chrX 4234241 4234250 chrX 4234402 4234411 6 161 10.5 7.5 9.0 0.6 170 chrX 4234241 intergenic not near genes chrX 4234326 intergenic not near genes chrX 4234411 intergenic not near genes chrX_6_4230001 chrX_4230001 CanS-SH 2677 chrX 4235671 4235702 chrX 4235873 4235904 11 202 14.5 7.0 10.8 0.9 233 chrX 4235671 intergenic not near genes chrX 4235788 intergenic not near genes chrX 4235904 intergenic not near genes chrX_11_4235001 chrX_4235001 CanS-SH 2678 chrX 4324316 4324392 chrX 4324468 4324544 24 152 10.0 6.5 8.2 2.6 228 chrX 4324316 intron norpA + chrX 4324430 intron norpA + chrX 4324544 intron norpA + chrX_24_4320001 chrX_4320001 CanS-SH 2679 chrX 4337861 4337901 chrX 4338059 4338099 15 198 11.5 6.5 9.0 1.5 238 chrX 4337861 intron norpA + chrX 4337980 intron norpA + chrX 4338099 intron norpA + chrX_15_4335001 chrX_4335001 CanS-SH 2680 chrX 4365455 4365463 chrX 4365681 4365689 5 226 6.0 17.0 11.5 0.4 234 chrX 4365455 intergenic norpA +,mir-982 - chrX 4365572 intergenic norpA +,mir-982 - chrX 4365689 intergenic mir-982 -,norpA +,mir-303 - chrX_5_4365001 chrX_4365001 CanS-SH 2681 chrX 4436438 4436483 chrX 4436596 4436641 9 158 6.0 14.0 10.0 0.8 203 chrX 4436438 intron,intron CR32773 -,bi + chrX 4436540 intron,intron CR32773 -,bi + chrX 4436641 intron,intron CR32773 -,bi + chrX_9_4435001 chrX_4435001 CanS-SH 2682 chrX 4574832 4574913 chrX 4574998 4575079 23 166 8.5 7.5 8.0 2.6 247 chrX 4574832 intron CR32773 - chrX 4574956 intron CR32773 - chrX 4575079 intron CR32773 - chrX_23_4570001 chrX_4570001 CanS-SH 2683 chrX 4575552 4575634 chrX 4575716 4575798 20 164 1.5 9.0 5.2 3.2 246 chrX 4575552 intron CR32773 - chrX 4575675 intron CR32773 - chrX 4575798 intron CR32773 - chrX_20_4575001 chrX_4575001 CanS-SH 2684 chrX 4660752 4660849 chrX 4660926 4661016 9 172 6.0 0.0 3.0 2.2 264 chrX 4660752 intron CG3009 - chrX 4660884 intron CG3009 - chrX 4661016 intron CG3009 - chrX_9_4660001 chrX_4660001 CanS-SH 2685 chrX 4700327 4700368 chrX 4700745 4700786 jockey 16 418 10.5 6.5 8.5 1.7 459 chrX 4700327 3` UTR ctp + chrX 4700556 3` UTR ctp + chrX 4700786 3` UTR ctp + chrX_16_4700001 chrX_4700001 CanS-SH 2686 chrX 4742119 4742133 chrX 4742482 4742494 6 363 10.5 0.0 5.2 1.0 375 chrX 4742119 intergenic not near genes chrX 4742306 intergenic not near genes chrX 4742494 intergenic not near genes chrX_6_4740001 chrX_4740001 CanS-SH 2687 chrX 4763193 4763220 chrX 4763756 4763783 Stalker4 7 563 11.5 3.0 7.2 0.9 590 chrX 4763193 intergenic not near genes chrX 4763488 intergenic not near genes chrX 4763783 intergenic not near genes chrX_7_4760001 chrX_4760001 CanS-SH 2688 chrX 4792326 4792350 chrX 4792834 4792858 jockey 7 508 8.0 6.5 7.2 0.9 532 chrX 4792326 intergenic not near genes chrX 4792592 intergenic not near genes chrX 4792858 intergenic not near genes chrX_7_4790001 chrX_4790001 CanS-SH 2689 chrX 4827915 4827940 chrX 4835361 4835386 Stalker4 5 7446 16.0 7.0 11.5 0.4 7471 chrX 4827915 intergenic not near genes chrX 4831650 intergenic not near genes chrX 4835386 intergenic not near genes chrX_5_4830001 chrX_4830001 CanS-SH 2690 chrX 4869641 4869696 chrX 4869813 4869868 13 172 7.5 8.0 7.8 1.5 227 chrX 4869641 intron CG42594 + chrX 4869754 intron CG42594 + chrX 4869868 intron CG42594 + chrX_13_4865001 chrX_4865001 CanS-SH 2691 chrX 4885711 4885782 chrX 4885879 4885950 14 168 6.5 7.5 7.0 1.8 239 chrX 4885711 intron CG42594 + chrX 4885830 intron CG42594 + chrX 4885950 intron CG42594 + chrX_14_4885001 chrX_4885001 CanS-SH 2692 chrX 5049515 5049574 chrX 5049678 5049737 16 163 11.0 0.0 5.5 2.5 222 chrX 5049515 intron,exon CR44833 -,ovo + chrX 5049626 intron,intron CR44833 -,ovo + chrX 5049737 intron,intron CR44833 -,ovo + chrX_16_5045001 chrX_5045001 CanS-SH 2693 chrX 5096224 5096248 chrX 5103864 5103888 springer 7 7640 1.5 9.5 5.5 1.1 7664 chrX 5096224 intron,intron CG15465 +,rg + chrX 5100056 intron,intron CG15465 +,rg + chrX 5103888 intron,intron CG15465 +,rg + chrX_7_5100001 chrX_5100001 CanS-SH 2694 chrX 5105404 5105434 chrX 5105574 5105602 4 168 10.0 11.0 10.5 0.3 198 chrX 5105404 intron,intron CG15465 +,rg + chrX 5105503 intron,intron CG15465 +,rg + chrX 5105602 intron,intron CG15465 +,rg + chrX_4_5105001 chrX_5105001 CanS-SH 2695 chrX 5122749 5122845 chrX 5123053 5123148 12 304 5.0 2.5 3.8 2.5 399 chrX 5122749 intron,intron CG15465 +,rg + chrX 5122948 intron,intron CG15465 +,rg + chrX 5123148 intron,intron CG15465 +,rg + chrX_12_5120001 chrX_5120001 CanS-SH 2696 chrX 5220314 5220329 chrX 5220630 5220645 5 316 20.5 2.0 11.2 0.4 331 chrX 5220314 intron,intron CG15465 +,rg + chrX 5220480 intron,intron CG15465 +,rg + chrX 5220645 intron,intron CG15465 +,rg + chrX_5_5220001 chrX_5220001 CanS-SH 2697 chrX 5241638 5241661 chrX 5241910 5241933 5 272 20.5 9.5 15.0 0.3 295 chrX 5241638 intron,intron CG15465 +,rg + chrX 5241786 intron,intron CG15465 +,rg + chrX 5241933 intron,intron CG15465 +,rg + chrX_5_5240001 chrX_5240001 CanS-SH 2698 chrX 5291441 5291707 chrX 5291599 5291858 24 156 13.0 11.0 12.0 1.8 417 chrX 5291441 intergenic not near genes chrX 5291650 intergenic not near genes chrX 5291858 intergenic not near genes chrX_24_5290001 chrX_5290001 CanS-SH 2699 chrX 5338647 5338677 chrX 5339975 5340005 jockey 10 1328 8.5 1.5 5.0 1.7 1358 chrX 5338647 intergenic not near genes chrX 5339326 intergenic not near genes chrX 5340005 intergenic SK + chrX_10_5335001 chrX_5335001 CanS-SH 2700 chrX 5345368 5345420 chrX 5345554 5345606 9 186 0.0 13.0 6.5 1.2 238 chrX 5345368 intron SK + chrX 5345487 intron SK + chrX 5345606 intron SK + chrX_9_5345001 chrX_5345001 CanS-SH 2701 chrX 5349251 5349300 chrX 5349403 5349452 9 152 6.0 13.5 9.8 0.8 201 chrX 5349251 intron SK + chrX 5349352 intron SK + chrX 5349452 intron SK + chrX_9_5345001 chrX_5345001 CanS-SH 2702 chrX 5368554 5368637 chrX 5368913 5368996 5 359 9.0 4.5 6.8 0.6 442 chrX 5368554 intron SK + chrX 5368775 intron SK + chrX 5368996 intron SK + chrX_5_5365001 chrX_5365001 CanS-SH 2703 chrX 5478332 5478404 chrX 5478495 5478567 27 163 10.5 5.0 7.8 3.1 235 chrX 5478332 intron SPR + chrX 5478450 intron SPR + chrX 5478567 intron SPR + chrX_27_5475001 chrX_5475001 CanS-SH 2704 chrX 5498439 5498505 chrX 5498592 5498661 17 153 3.0 3.5 3.2 4.0 222 chrX 5498439 intergenic not near genes chrX 5498550 intergenic not near genes chrX 5498661 intergenic not near genes chrX_17_5495001 chrX_5495001 CanS-SH 2705 chrX 5507139 5507198 chrX 5507295 5507354 14 156 0.0 3.0 1.5 5.6 215 chrX 5507139 5` UTR CR45519 + chrX 5507246 5` UTR CR45519 + chrX 5507354 intergenic CR45519 + chrX_14_5505001 chrX_5505001 CanS-SH 2706 chrX 5509033 5509082 chrX 5509200 5509249 15 167 10.5 4.0 7.2 1.8 216 chrX 5509033 intergenic not near genes chrX 5509141 intergenic not near genes chrX 5509249 intergenic not near genes chrX_15_5505001 chrX_5505001 CanS-SH 2707 chrX 5524784 5524807 chrX 5528718 5528741 412 6 3934 16.0 6.5 11.2 0.5 3957 chrX 5524784 intergenic snoRNA:Psi28S-3342 - chrX 5526762 intergenic not near genes chrX 5528741 intergenic Vsx2 - chrX_6_5525001 chrX_5525001 CanS-SH 2708 chrX 5537643 5537682 chrX 5537801 5537840 roo 8 158 12.0 5.5 8.8 0.8 197 chrX 5537643 intron Vsx2 - chrX 5537742 intron Vsx2 - chrX 5537840 intron Vsx2 - chrX_8_5535001 chrX_5535001 CanS-SH 2709 chrX 5539054 5539139 chrX 5539207 5539292 22 153 9.5 8.5 9.0 2.2 238 chrX 5539054 intron Vsx2 - chrX 5539173 intron Vsx2 - chrX 5539292 intron Vsx2 - chrX_22_5535001 chrX_5535001 CanS-SH 2710 chrX 5726180 5726217 chrX 5726599 5726636 13 419 10.5 0.0 5.2 2.1 456 chrX 5726180 intron CG32758 - chrX 5726408 intron CG32758 - chrX 5726636 intron CG32758 - chrX_13_5725001 chrX_5725001 CanS-SH 2711 chrX 5727349 5727415 chrX 5732163 5732229 Doc 11 4814 3.5 8.0 5.8 1.6 4880 chrX 5727349 intron CG32758 - chrX 5729789 intron CG32758 - chrX 5732229 intron CG32758 - chrX_11_5725001 chrX_5725001 CanS-SH 2712 chrX 5883745 5883783 chrX 5884061 5884099 pogo 8 316 18.0 2.5 10.2 0.7 354 chrX 5883745 intron CR45668 - chrX 5883922 intron CR45668 - chrX 5884099 intron CR45668 - chrX_8_5880001 chrX_5880001 CanS-SH 2713 chrX 5884104 5884135 chrX 5884420 5884451 pogo 8 316 2.5 8.5 5.5 1.2 347 chrX 5884104 intron CR45668 - chrX 5884278 intron CR45668 - chrX 5884451 intron CR45668 - chrX_8_5880001 chrX_5880001 CanS-SH 2714 chrX 6080767 6080824 chrX 6080926 6080983 16 159 9.0 6.0 7.5 1.9 216 chrX 6080767 intron CG4660 - chrX 6080875 intron CG4660 - chrX 6080983 intron CG4660 - chrX_16_6080001 chrX_6080001 CanS-SH 2715 chrX 6135144 6135178 chrX 6135304 6135338 9 160 0.0 3.5 1.8 3.2 194 chrX 6135144 intron Ca-alpha1T - chrX 6135241 intron Ca-alpha1T - chrX 6135338 intron Ca-alpha1T - chrX_9_6135001 chrX_6135001 CanS-SH 2716 chrX 6171522 6171559 chrX 6179030 6179067 Quasimodo 6 7508 16.5 9.5 13.0 0.4 7545 chrX 6171522 intron Ca-alpha1T - chrX 6175294 intron Ca-alpha1T - chrX 6179067 intron Ca-alpha1T - chrX_6_6175001 chrX_6175001 CanS-SH 2717 chrX 6197815 6197839 chrX 6201850 6201874 7 4035 10.0 26.0 18.0 0.4 4059 chrX 6197815 intron CG32751 - chrX 6199844 5` UTR CG43090 - chrX 6201874 exon vanin-like - chrX_7_6195001 chrX_6195001 CanS-SH 2718 chrX 6215456 6215515 chrX 6215612 6215671 11 156 14.5 9.5 12.0 0.8 215 chrX 6215456 intergenic not near genes chrX 6215564 intergenic not near genes chrX 6215671 intergenic not near genes chrX_11_6215001 chrX_6215001 CanS-SH 2719 chrX 6315114 6315189 chrX 6315267 6315342 19 153 5.5 7.0 6.2 2.6 228 chrX 6315114 intron CG15894 + chrX 6315228 intron CG15894 + chrX 6315342 intron CG15894 + chrX_19_6315001 chrX_6315001 CanS-SH 2720 chrX 6375170 6375206 chrX 6375451 6375487 11 281 11.5 9.0 10.2 1.0 317 chrX 6375170 intergenic not near genes chrX 6375328 intergenic not near genes chrX 6375487 intergenic not near genes chrX_11_6375001 chrX_6375001 CanS-SH 2721 chrX 6388598 6388690 chrX 6388749 6388841 30 151 6.5 8.5 7.5 3.5 243 chrX 6388598 intergenic not near genes chrX 6388720 intergenic not near genes chrX 6388841 intergenic not near genes chrX_30_6385001 chrX_6385001 CanS-SH 2722 chrX 6392817 6392846 chrX 6397657 6397686 Doc 8 4840 9.0 7.5 8.2 0.9 4869 chrX 6392817 intergenic not near genes chrX 6395252 intergenic not near genes chrX 6397686 intergenic not near genes chrX_8_6395001 chrX_6395001 CanS-SH 2723 chrX 6445245 6445273 chrX 6451078 6451106 297 10 5833 10.5 7.5 9.0 1.0 5861 chrX 6445245 intron CG42340 - chrX 6448176 intron CG42340 - chrX 6451106 intron CG42340 - chrX_10_6445001 chrX_6445001 CanS-SH 2724 chrX 6487909 6487981 chrX 6488066 6488138 18 157 6.0 13.0 9.5 1.7 229 chrX 6487909 intron CG42340 - chrX 6488024 intron CG42340 - chrX 6488138 intron CG42340 - chrX_18_6485001 chrX_6485001 CanS-SH 2725 chrX 6562776 6562793 chrX 6571332 6571350 Tirant 6 8557 12.0 6.0 9.0 0.6 8574 chrX 6562776 intron CG34417 + chrX 6567063 intron CG34417 + chrX 6571350 intron CG34417 + chrX_6_6565001 chrX_6565001 CanS-SH 2726 chrX 6571539 6571624 chrX 6571697 6571782 23 158 9.5 5.5 7.5 2.7 243 chrX 6571539 intron CG34417 + chrX 6571660 intron CG34417 + chrX 6571782 intron CG34417 + chrX_23_6570001 chrX_6570001 CanS-SH 2727 chrX 6591784 6591874 chrX 6591944 6592025 20 159 4.5 0.0 2.2 6.2 241 chrX 6591784 intron Pat1 + chrX 6591904 intron Pat1 + chrX 6592025 intron Pat1 + chrX_20_6590001 chrX_6590001 CanS-SH 2728 chrX 6605423 6605454 chrX 6608520 6608551 Burdock 8 3097 10.0 12.0 11.0 0.7 3128 chrX 6605423 intron pigs + chrX 6606987 intron pigs + chrX 6608551 intron pigs + chrX_8_6605001 chrX_6605001 CanS-SH 2729 chrX 6730913 6730946 chrX 6731366 6731399 8 453 10.0 8.0 9.0 0.8 486 chrX 6730913 intron CG3168 - chrX 6731156 intron CG3168 - chrX 6731399 intron CG3168 - chrX_8_6730001 chrX_6730001 CanS-SH 2730 chrX 6733374 6733666 chrX 6733538 6733826 33 163 14.0 11.5 12.8 2.4 452 chrX 6733374 intron,intron CG3168 -,CR43461 + chrX 6733600 intron,intron CG3168 -,CR43461 + chrX 6733826 intron,intron CG3168 -,CR43461 + chrX_33_6730001 chrX_6730001 CanS-SH 2731 chrX 6737460 6737548 chrX 6737617 6737704 15 156 7.5 7.0 7.2 1.8 244 chrX 6737460 intron CG3168 - chrX 6737582 intron CG3168 - chrX 6737704 intron CG3168 - chrX_15_6735001 chrX_6735001 CanS-SH 2732 chrX 6792020 6792092 chrX 6792181 6792253 21 161 6.0 8.5 7.2 2.6 233 chrX 6792020 intron C3G - chrX 6792136 intron C3G - chrX 6792253 intron C3G - chrX_21_6790001 chrX_6790001 CanS-SH 2733 chrX 6794935 6794982 chrX 6795096 6795143 13 161 12.0 5.5 8.8 1.3 208 chrX 6794935 intron C3G - chrX 6795039 intron C3G - chrX 6795143 intron C3G - chrX_13_6795001 chrX_6795001 CanS-SH 2734 chrX 6814204 6814271 chrX 6814366 6814432 7 162 5.5 4.5 5.0 1.2 228 chrX 6814204 exon iav + chrX 6814318 intron iav + chrX 6814432 intron iav + chrX_7_6810001 chrX_6810001 CanS-SH 2735 chrX 6865716 6865789 chrX 6865872 6865948 12 158 10.0 5.0 7.5 1.4 232 chrX 6865716 intron CG14434 - chrX 6865832 intron CG14434 - chrX 6865948 intron CG14434 - chrX_12_6865001 chrX_6865001 CanS-SH 2736 chrX 6897278 6897294 chrX 6897653 6897669 5 375 4.5 0.0 2.2 1.6 391 chrX 6897278 intergenic not near genes chrX 6897474 intergenic not near genes chrX 6897669 intergenic not near genes chrX_5_6895001 chrX_6895001 CanS-SH 2737 chrX 6897572 6897584 chrX 7243843 7243855 6 346271 1.0 13.0 7.0 0.8 346283 chrX 6897572 intergenic not near genes chrX 7070714 exon CG4607 + chrX 7243855 intron CR44357 - chrX_6_7070001 chrX_7070001 CanS-SH 2738 chrX 6897626 6897704 chrX 6897811 6897889 10 185 0.0 3.5 1.8 3.6 263 chrX 6897626 intergenic not near genes chrX 6897758 intergenic not near genes chrX 6897889 intergenic not near genes chrX_10_6895001 chrX_6895001 CanS-SH 2739 chrX 6901310 6901333 chrX 6901461 6901484 5 151 12.5 4.0 8.2 0.5 174 chrX 6901310 intergenic not near genes chrX 6901397 intergenic not near genes chrX 6901484 intergenic not near genes chrX_5_6900001 chrX_6900001 CanS-SH 2740 chrX 6984594 6984650 chrX 6984746 6984802 18 152 3.5 11.5 7.5 2.1 208 chrX 6984594 intron ogre - chrX 6984698 intron ogre - chrX 6984802 intron ogre - chrX_18_6980001 chrX_6980001 CanS-SH 2741 chrX 6988473 6988523 chrX 6988633 6988683 13 160 11.0 6.0 8.5 1.4 210 chrX 6988473 intron ogre - chrX 6988578 intron ogre - chrX 6988683 intron ogre - chrX_13_6985001 chrX_6985001 CanS-SH 2742 chrX 6989435 6989528 chrX 6989597 6989690 24 162 4.0 5.0 4.5 4.4 255 chrX 6989435 intron ogre - chrX 6989562 intron ogre - chrX 6989690 intron ogre - chrX_24_6985001 chrX_6985001 CanS-SH 2743 chrX 7023543 7023579 chrX 7031008 7031044 Tabor 6 7465 17.0 11.0 14.0 0.4 7501 chrX 7023543 intron CG12541 - chrX 7027294 intron CG12541 - chrX 7031044 intron CG12541 - chrX_6_7025001 chrX_7025001 CanS-SH 2744 chrX 7036635 7036661 chrX 7036787 7036813 7 152 6.0 6.5 6.2 1.0 178 chrX 7036635 intron CG12541 - chrX 7036724 intron CG12541 - chrX 7036813 intron CG12541 - chrX_7_7035001 chrX_7035001 CanS-SH 2745 chrX 7118514 7118537 chrX 7118668 7118691 9 154 14.5 7.0 10.8 0.8 177 chrX 7118514 intergenic not near genes chrX 7118602 intergenic not near genes chrX 7118691 intergenic not near genes chrX_9_7115001 chrX_7115001 CanS-SH 2746 chrX 7470152 7470218 chrX 7470315 7470381 8 163 6.0 6.0 6.0 1.1 229 chrX 7470152 intergenic not near genes chrX 7470266 intergenic not near genes chrX 7470381 intergenic not near genes chrX_8_7470001 chrX_7470001 CanS-SH 2747 chrX 7570571 7570664 chrX 7570780 7570873 10 209 7.0 6.0 6.5 1.3 302 chrX 7570571 intergenic not near genes chrX 7570722 intergenic not near genes chrX 7570873 intergenic not near genes chrX_10_7570001 chrX_7570001 CanS-SH 2748 chrX 7702843 7702874 chrX 7703357 7703388 jockey 9 514 16.5 5.5 11.0 0.8 545 chrX 7702843 intron CHES-1-like - chrX 7703116 intron CHES-1-like - chrX 7703388 intron CHES-1-like - chrX_9_7700001 chrX_7700001 CanS-SH 2749 chrX 7832383 7832439 chrX 7832547 7832603 23 164 9.0 11.5 10.2 2.1 220 chrX 7832383 intron CG1402 + chrX 7832493 intron CG1402 + chrX 7832603 intron CG1402 + chrX_23_7830001 chrX_7830001 CanS-SH 2750 chrX 7845660 7845704 chrX 7847226 7847270 hopper2 5 1566 10.5 5.5 8.0 0.6 1610 chrX 7845660 intergenic not near genes chrX 7846465 intergenic not near genes chrX 7847270 intergenic not near genes chrX_5_7845001 chrX_7845001 CanS-SH 2751 chrX 7873497 7873524 chrX 7873654 7873681 5 157 4.5 9.5 7.0 0.6 184 chrX 7873497 5` UTR CR43615 + chrX 7873589 5` UTR CR43615 + chrX 7873681 intergenic CR43615 +,dec-1 - chrX_5_7870001 chrX_7870001 CanS-SH 2752 chrX 7960820 7960879 chrX 7960984 7961043 15 164 11.5 10.0 10.8 1.3 223 chrX 7960820 intron,5` UTR sws -,CR45620 + chrX 7960932 intron sws - chrX 7961043 intron sws - chrX_15_7960001 chrX_7960001 CanS-SH 2753 chrX 7968456 7968469 chrX 7968649 7968663 5 193 6.5 8.5 7.5 0.6 207 chrX 7968456 intron sn + chrX 7968560 intron sn + chrX 7968663 intron sn + chrX_5_7965001 chrX_7965001 CanS-SH 2754 chrX 7981193 7981226 chrX 7981348 7981381 4 155 8.0 5.0 6.5 0.5 188 chrX 7981193 intron sn + chrX 7981287 intron sn + chrX 7981381 intron sn + chrX_4_7980001 chrX_7980001 CanS-SH 2755 chrX 8031371 8031401 chrX 8035755 8035785 Juan 11 4384 0.0 5.5 2.8 2.9 4414 chrX 8031371 intergenic not near genes chrX 8033578 intergenic not near genes chrX 8035785 3` UTR CG2233 - chrX_11_8030001 chrX_8030001 CanS-SH 2756 chrX 8085511 8085578 chrX 8085672 8085739 20 161 6.0 4.0 5.0 3.3 228 chrX 8085511 intron,5` UTR CG2256 -,CR45535 + chrX 8085625 intron,5` UTR CG2256 -,CR45535 + chrX 8085739 intron,5` UTR CG2256 -,CR45535 + chrX_20_8085001 chrX_8085001 CanS-SH 2757 chrX 8288063 8288129 chrX 8288220 8288285 5 156 4.0 5.5 4.8 0.9 222 chrX 8288063 intron nAChRalpha3 - chrX 8288174 intron nAChRalpha3 - chrX 8288285 intron nAChRalpha3 - chrX_5_8285001 chrX_8285001 CanS-SH 2758 chrX 8331875 8331967 chrX 8332070 8332162 10 195 0.5 3.5 2.0 3.3 287 chrX 8331875 intron nAChRalpha3 - chrX 8332018 intron nAChRalpha3 - chrX 8332162 intron nAChRalpha3 - chrX_10_8330001 chrX_8330001 CanS-SH 2759 chrX 8649396 8649433 chrX 8649591 8649628 11 195 8.5 11.0 9.8 1.0 232 chrX 8649396 intron oc - chrX 8649512 intron oc - chrX 8649628 intron oc - chrX_11_8645001 chrX_8645001 CanS-SH 2760 chrX 8795284 8795318 chrX 8795455 8795488 5 171 8.0 6.5 7.2 0.6 204 chrX 8795284 intron Lim1 - chrX 8795386 intron Lim1 - chrX 8795488 intron Lim1 - chrX_5_8795001 chrX_8795001 CanS-SH 2761 chrX 8832208 8832278 chrX 8832359 8832429 11 151 3.0 6.5 4.8 1.9 221 chrX 8832208 intergenic not near genes chrX 8832318 intergenic not near genes chrX 8832429 intergenic not near genes chrX_11_8830001 chrX_8830001 CanS-SH 2762 chrX 8860773 8860786 chrX 8860932 8860945 6 159 0.0 4.0 2.0 2.0 172 chrX 8860773 intron CG12075 + chrX 8860859 intron CG12075 + chrX 8860945 intron CG12075 + chrX_6_8860001 chrX_8860001 CanS-SH 2763 chrX 8922266 8922306 chrX 8922775 8922815 jockey 8 509 14.0 7.5 10.8 0.7 549 chrX 8922266 intron rdgA + chrX 8922540 intron rdgA + chrX 8922815 intron rdgA + chrX_8_8920001 chrX_8920001 CanS-SH 2764 chrX 8927526 8927542 chrX 8929871 8929887 7 2345 14.0 13.5 13.8 0.5 2361 chrX 8927526 intron rdgA + chrX 8928706 intron rdgA + chrX 8929887 intron rdgA + chrX_7_8925001 chrX_8925001 CanS-SH 2765 chrX 8948714 8948736 chrX 8956299 8956321 roo 4 7585 0.0 11.0 5.5 0.6 7607 chrX 8948714 intron rdgA + chrX 8952518 intron rdgA + chrX 8956321 intron rdgA + chrX_4_8950001 chrX_8950001 CanS-SH 2766 chrX 8961596 8961680 chrX 8961754 8961838 24 158 3.5 5.5 4.5 4.4 242 chrX 8961596 intron rdgA + chrX 8961717 intron rdgA + chrX 8961838 intron rdgA + chrX_24_8960001 chrX_8960001 CanS-SH 2767 chrX 9010985 9011059 chrX 9011142 9011216 30 157 7.0 4.5 5.8 4.4 231 chrX 9010985 intron,intron rdgA +,CR43836 - chrX 9011100 intron,intron rdgA +,CR43836 - chrX 9011216 intron,intron rdgA +,CR43836 - chrX_30_9010001 chrX_9010001 CanS-SH 2768 chrX 9041956 9041977 chrX 9042138 9042159 4 182 0.0 7.0 3.5 0.9 203 chrX 9041956 intron,intron CR43836 -,CG42388 + chrX 9042058 intron,intron CR43836 -,CG42388 + chrX 9042159 intron,intron CR43836 -,CG42388 + chrX_4_9040001 chrX_9040001 CanS-SH 2769 chrX 9126679 9126716 chrX 9126899 9126936 12 220 10.0 8.5 9.2 1.2 257 chrX 9126679 intron fend - chrX 9126808 intron fend - chrX 9126936 intron fend - chrX_12_9125001 chrX_9125001 CanS-SH 2770 chrX 9210869 9210877 chrX 9211020 9211028 5 151 6.0 23.0 14.5 0.3 159 chrX 9210869 5` UTR CG12119 - chrX 9210948 intergenic CG12119 - chrX 9211028 intergenic CG12119 - chrX_5_9210001 chrX_9210001 CanS-SH 2771 chrX 9272944 9273018 chrX 9273099 9273174 13 156 10.0 2.0 6.0 1.9 230 chrX 9272944 5` UTR Cfp1 - chrX 9273059 intergenic Cfp1 -,CG16892 + chrX 9273174 intergenic Cfp1 -,CG16892 + chrX_13_9270001 chrX_9270001 CanS-SH 2772 chrX 9289640 9289708 chrX 9289798 9289866 11 158 7.5 7.5 7.5 1.3 226 chrX 9289640 intron lz + chrX 9289753 intron lz + chrX 9289866 intron lz + chrX_11_9285001 chrX_9285001 CanS-SH 2773 chrX 9337883 9337922 chrX 9338050 9338089 7 167 9.0 5.0 7.0 0.9 206 chrX 9337883 exon CG34449 - chrX 9337986 intron CG34449 - chrX 9338089 exon CG34449 - chrX_7_9335001 chrX_9335001 CanS-SH 2774 chrX 9534533 9534537 chrX 13057300 13057304 5 3522767 21.5 20.5 21.0 0.2 3522771 chrX 9534533 intron,3` UTR CG32700 -,CG34026 + chrX 11295918 intron CG44422 - chrX 13057304 intron rad + chrX_5_11295001 chrX_11295001 CanS-SH 2775 chrX 9575738 9575769 chrX 9576137 9576168 mdg3 6 399 12.5 11.0 11.8 0.5 430 chrX 9575738 intron,exon CG32699 -,CG42395 - chrX 9575953 intron,intron CG32699 -,CG42395 - chrX 9576168 intron,5` UTR CG32699 -,CG42395 - chrX_6_9575001 chrX_9575001 CanS-SH 2776 chrX 9798481 9798490 chrX 9805606 9805617 297 4 7126 15.0 1.5 8.2 0.4 7136 chrX 9798481 intron CG32698 + chrX 9802049 intron CG32698 + chrX 9805617 intron CG32698 + chrX_4_9800001 chrX_9800001 CanS-SH 2777 chrX 9834910 9834955 chrX 9835074 9835119 5 162 6.5 10.0 8.2 0.5 209 chrX 9834910 intron CG32698 + chrX 9835014 intron CG32698 + chrX 9835119 intron CG32698 + chrX_5_9835001 chrX_9835001 CanS-SH 2778 chrX 9839282 9839317 chrX 9839440 9839475 9 158 13.5 9.0 11.2 0.7 193 chrX 9839282 intron CG32698 + chrX 9839378 intron CG32698 + chrX 9839475 intron CG32698 + chrX_9_9835001 chrX_9835001 CanS-SH 2779 chrX 9923358 9923401 chrX 9923523 9923567 9 166 10.5 14.0 12.2 0.7 209 chrX 9923358 intergenic not near genes chrX 9923462 intergenic not near genes chrX 9923567 intergenic not near genes chrX_9_9920001 chrX_9920001 CanS-SH 2780 chrX 9995291 9995345 chrX 9995465 9995519 14 174 12.0 4.0 8.0 1.6 228 chrX 9995291 intron CG32694 + chrX 9995405 intron CG32694 + chrX 9995519 intron CG32694 + chrX_14_9995001 chrX_9995001 CanS-SH 2781 chrX 10035362 10035447 chrX 10035523 10035608 16 161 8.5 7.5 8.0 1.8 246 chrX 10035362 exon Cht6 + chrX 10035485 exon Cht6 + chrX 10035608 exon Cht6 + chrX_16_10035001 chrX_10035001 CanS-SH 2782 chrX 10133560 10133612 chrX 10133722 10133774 13 162 7.5 10.5 9.0 1.3 214 chrX 10133560 intron,intron RhoU +,CR44894 - chrX 10133667 intron,intron RhoU +,CR44894 - chrX 10133774 intron,intron RhoU +,CR44894 - chrX_13_10130001 chrX_10130001 CanS-SH 2783 chrX 10138152 10138188 chrX 10145731 10145767 412 14 7579 14.0 7.5 10.8 1.2 7615 chrX 10138152 intron,intron RhoU +,CR44894 - chrX 10141960 intron,intron RhoU +,CR44894 - chrX 10145767 intron,intron RhoU +,CR44894 - chrX_14_10140001 chrX_10140001 CanS-SH 2784 chrX 10317527 10317565 chrX 10317680 10317718 16 153 0.0 10.0 5.0 2.7 191 chrX 10317527 intron alpha-Man-I - chrX 10317622 intron alpha-Man-I - chrX 10317718 intron alpha-Man-I - chrX_16_10315001 chrX_10315001 CanS-SH 2785 chrX 10348736 10348776 chrX 10356376 10356415 springer 12 7640 5.5 6.0 5.8 1.8 7679 chrX 10348736 intergenic snoRNA:U3:9B + chrX 10352576 intergenic not near genes chrX 10356415 intergenic l(1)G0289 - chrX_12_10350001 chrX_10350001 CanS-SH 2786 chrX 10404953 10404988 chrX 10405164 10405199 6 211 11.5 5.0 8.2 0.7 246 chrX 10404953 intron flw + chrX 10405076 intron flw + chrX 10405199 intron flw + chrX_6_10405001 chrX_10405001 CanS-SH 2787 chrX 10430560 10430603 chrX 10431879 10431921 8 1319 13.0 8.5 10.8 0.7 1361 chrX 10430560 intron CG32683 - chrX 10431240 intron CG32683 - chrX 10431921 intron CG32683 - chrX_8_10430001 chrX_10430001 CanS-SH 2788 chrX 10539180 10539246 chrX 10539338 10539404 23 158 7.0 7.0 7.0 2.9 224 chrX 10539180 intron spri - chrX 10539292 intron spri - chrX 10539404 intron spri - chrX_23_10535001 chrX_10535001 CanS-SH 2789 chrX 10550267 10550357 chrX 10550420 10550510 34 153 7.5 5.0 6.2 4.7 243 chrX 10550267 intron spri - chrX 10550388 intron spri - chrX 10550510 intron spri - chrX_34_10550001 chrX_10550001 CanS-SH 2790 chrX 10550795 10550834 chrX 10552337 10552376 hobo 13 1542 9.5 7.5 8.5 1.4 1581 chrX 10550795 intron spri - chrX 10551586 intron spri - chrX 10552376 intron spri - chrX_13_10550001 chrX_10550001 CanS-SH 2791 chrX 10648141 10648194 chrX 10648324 10648377 8 183 6.0 6.0 6.0 1.1 236 chrX 10648141 intron X11Lbeta + chrX 10648259 intron X11Lbeta + chrX 10648377 intron X11Lbeta + chrX_8_10645001 chrX_10645001 CanS-SH 2792 chrX 10685991 10686028 chrX 10691203 10691240 roo 8 5212 12.5 5.5 9.0 0.8 5249 chrX 10685991 intron X11Lbeta + chrX 10688616 intron X11Lbeta + chrX 10691240 intron X11Lbeta + chrX_8_10685001 chrX_10685001 CanS-SH 2793 chrX 10700344 10700383 chrX 10700502 10700541 9 158 4.5 10.0 7.2 1.1 197 chrX 10700344 exon X11Lbeta + chrX 10700442 exon X11Lbeta + chrX 10700541 exon X11Lbeta + chrX_9_10700001 chrX_10700001 CanS-SH 2794 chrX 10772609 10772695 chrX 10772767 10772853 Tirant 22 158 7.5 7.0 7.2 2.7 244 chrX 10772609 5` UTR CG15211 + chrX 10772731 intron CG15211 + chrX 10772853 intron CG15211 + chrX_22_10770001 chrX_10770001 CanS-SH 2795 chrX 10802969 10803031 chrX 10803129 10803191 12 160 6.5 9.5 8.0 1.3 222 chrX 10802969 intron Imp - chrX 10803080 intron Imp - chrX 10803191 intron Imp - chrX_12_10800001 chrX_10800001 CanS-SH 2796 chrX 11095945 11095966 chrX 11103122 11103143 HMS-Beagle 8 7177 9.0 9.5 9.2 0.8 7198 chrX 11095945 intergenic not near genes chrX 11099544 intergenic not near genes chrX 11103143 intron CG42249 + chrX_8_11095001 chrX_11095001 CanS-SH 2797 chrX 11184189 11184220 chrX 11189340 11189371 flea 6 5151 9.5 8.0 8.8 0.6 5182 chrX 11184189 intergenic not near genes chrX 11186780 intergenic not near genes chrX 11189371 intergenic not near genes chrX_6_11185001 chrX_11185001 CanS-SH 2798 chrX 11194370 11194381 chrX 11201866 11201877 gypsy5 6 7496 9.5 10.0 9.8 0.6 7507 chrX 11194370 intergenic not near genes chrX 11198124 intergenic not near genes chrX 11201877 intergenic CG11106 + chrX_6_11195001 chrX_11195001 CanS-SH 2799 chrX 11311998 11312036 chrX 11319426 11319464 Stalker2 9 7428 12.5 5.5 9.0 0.9 7466 chrX 11311998 intergenic not near genes chrX 11315731 intergenic not near genes chrX 11319464 intergenic not near genes chrX_9_11315001 chrX_11315001 CanS-SH 2800 chrX 11319898 11319914 chrX 11320082 11320098 5 184 16.5 6.0 11.2 0.4 200 chrX 11319898 intergenic not near genes chrX 11319998 intergenic not near genes chrX 11320098 intergenic not near genes chrX_5_11315001 chrX_11315001 CanS-SH 2801 chrX 11384508 11384529 chrX 11384822 11384843 4 314 13.5 4.5 9.0 0.4 335 chrX 11384508 intron dlg1 + chrX 11384676 intron dlg1 + chrX 11384843 intron dlg1 + chrX_4_11380001 chrX_11380001 CanS-SH 2802 chrX 11534975 11535013 chrX 11541520 11541558 Burdock 13 6545 19.0 8.5 13.8 0.9 6583 chrX 11534975 intron Drak + chrX 11538266 intron Drak + chrX 11541558 intron Drak + chrX_13_11535001 chrX_11535001 CanS-SH 2803 chrX 11633357 11633392 chrX 11640486 11640521 297 11 7129 13.5 9.0 11.2 0.9 7164 chrX 11633357 intron Ptp10D + chrX 11636939 intron Ptp10D + chrX 11640521 intron Ptp10D + chrX_11_11635001 chrX_11635001 CanS-SH 2804 chrX 11645049 11645079 chrX 11648293 11648323 NOF 6 3244 9.5 9.5 9.5 0.6 3274 chrX 11645049 intron Ptp10D + chrX 11646686 intron Ptp10D + chrX 11648323 intron Ptp10D + chrX_6_11645001 chrX_11645001 CanS-SH 2805 chrX 11761932 11761975 chrX 11762086 11762129 9 154 7.5 2.5 5.0 1.5 197 chrX 11761932 intron m + chrX 11762030 intron m + chrX 11762129 intron m + chrX_9_11760001 chrX_11760001 CanS-SH 2806 chrX 11804603 11804690 chrX 11804782 11804869 9 179 5.0 9.0 7.0 1.1 266 chrX 11804603 intron Hsc70-3 - chrX 11804736 intron Hsc70-3 - chrX 11804869 intron Hsc70-3 - chrX_9_11800001 chrX_11800001 CanS-SH 2807 chrX 11822150 11822159 chrX 11822364 11822373 4 214 15.5 12.0 13.8 0.3 223 chrX 11822150 intron rudhira + chrX 11822262 intron rudhira + chrX 11822373 intron rudhira + chrX_4_11820001 chrX_11820001 CanS-SH 2808 chrX 11922292 11922374 chrX 11922500 11922582 17 208 7.0 7.0 7.0 2.1 290 chrX 11922292 exon Sclp - chrX 11922437 intron Sclp - chrX 11922582 intron Sclp - chrX_17_11920001 chrX_11920001 CanS-SH 2809 chrX 11936506 11936583 chrX 11936680 11936757 8 174 2.0 6.5 4.2 1.5 251 chrX 11936506 intron cac - chrX 11936632 intron cac - chrX 11936757 exon cac - chrX_8_11935001 chrX_11935001 CanS-SH 2810 chrX 12109630 12109695 chrX 12109793 12109859 17 164 11.0 4.5 7.8 1.9 229 chrX 12109630 intron,intron,exon CR43960 +,Ten-a +,CG2750 + chrX 12109744 intron,intron,exon CR43960 +,Ten-a +,CG2750 + chrX 12109859 intron,intron,exon CR43960 +,Ten-a +,CG2750 + chrX_17_12105001 chrX_12105001 CanS-SH 2811 chrX 12156777 12156848 chrX 12156950 12157020 13 172 3.0 3.5 3.2 3.1 243 chrX 12156777 intron Ten-a + chrX 12156898 intron Ten-a + chrX 12157020 intron Ten-a + chrX_13_12155001 chrX_12155001 CanS-SH 2812 chrX 12168077 12168111 chrX 12173594 12173628 I-element 9 5517 8.0 0.0 4.0 1.8 5551 chrX 12168077 intron Ten-a + chrX 12170852 intron Ten-a + chrX 12173628 intron Ten-a + chrX_9_12170001 chrX_12170001 CanS-SH 2813 chrX 12191522 12191579 chrX 12191685 12191742 8 163 3.0 4.0 3.5 1.8 220 chrX 12191522 intron Ten-a + chrX 12191632 intron Ten-a + chrX 12191742 intron Ten-a + chrX_8_12190001 chrX_12190001 CanS-SH 2814 chrX 12202716 12202782 chrX 12202875 12202941 12 159 7.0 6.5 6.8 1.5 225 chrX 12202716 intron Ten-a + chrX 12202828 intron Ten-a + chrX 12202941 intron Ten-a + chrX_12_12200001 chrX_12200001 CanS-SH 2815 chrX 12246897 12246939 chrX 12247060 12247102 11 163 8.5 3.0 5.8 1.6 205 chrX 12246897 intron Ten-a + chrX 12247000 intron Ten-a + chrX 12247102 intron Ten-a + chrX_11_12245001 chrX_12245001 CanS-SH 2816 chrX 12350718 12350733 chrX 12350874 12350889 4 156 14.0 0.0 7.0 0.5 171 chrX 12350718 intergenic not near genes chrX 12350804 intergenic not near genes chrX 12350889 intergenic not near genes chrX_4_12350001 chrX_12350001 CanS-SH 2817 chrX 12357223 12357261 chrX 12357386 12357424 6 163 1.0 2.0 1.5 2.4 201 chrX 12357223 intergenic not near genes chrX 12357324 intergenic not near genes chrX 12357424 intergenic not near genes chrX_6_12355001 chrX_12355001 CanS-SH 2818 chrX 12381822 12381840 chrX 12385799 12385817 flea 5 3977 16.5 3.5 10.0 0.5 3995 chrX 12381822 intergenic not near genes chrX 12383820 intergenic not near genes chrX 12385817 intergenic not near genes chrX_5_12380001 chrX_12380001 CanS-SH 2819 chrX 12533769 12533779 chrX 12533921 12533931 5 152 0.5 6.0 3.2 1.2 162 chrX 12533769 intron CG43921 - chrX 12533850 intron CG43921 - chrX 12533931 intron CG43921 - chrX_5_12530001 chrX_12530001 CanS-SH 2820 chrX 12557396 12557577 chrX 12557552 12557752 10 162 0.0 0.0 0.0 10.0 356 chrX 12557396 intron CG43921 - chrX 12557574 intron CG43921 - chrX 12557752 intron CG43921 - chrX_10_12555001 chrX_12555001 CanS-SH 2821 chrX 12562109 12562162 chrX 12562311 12562364 7 202 6.0 13.0 9.5 0.7 255 chrX 12562109 intron CG43921 - chrX 12562236 intron CG43921 - chrX 12562364 intron CG43921 - chrX_7_12560001 chrX_12560001 CanS-SH 2822 chrX 12635378 12635429 chrX 12635538 12635589 9 160 4.0 9.5 6.8 1.2 211 chrX 12635378 intron Tomosyn + chrX 12635484 intron Tomosyn + chrX 12635589 intron Tomosyn + chrX_9_12635001 chrX_12635001 CanS-SH 2823 chrX 12742736 12742856 chrX 12742900 12743017 18 162 0.0 0.0 0.0 18.0 281 chrX 12742736 5` UTR CR45623 + chrX 12742876 5` UTR CR45623 + chrX 12743017 intergenic CR45623 + chrX_18_12740001 chrX_12740001 CanS-SH 2824 chrX 12754630 12754638 chrX 12754893 12754901 4 263 9.5 11.0 10.2 0.4 271 chrX 12754630 intergenic CR44619 + chrX 12754766 intergenic CR44619 + chrX 12754901 intergenic CR44619 + chrX_4_12750001 chrX_12750001 CanS-SH 2825 chrX 12781214 12781223 chrX 12781373 12781382 4 159 6.0 15.0 10.5 0.3 168 chrX 12781214 intron CG32647 - chrX 12781298 intron CG32647 - chrX 12781382 intron CG32647 - chrX_4_12780001 chrX_12780001 CanS-SH 2826 chrX 12785377 12785442 chrX 12785529 12785594 21 152 12.0 7.0 9.5 2.0 217 chrX 12785377 intergenic Pde9 -,CG32647 - chrX 12785486 intergenic Pde9 - chrX 12785594 3` UTR Pde9 - chrX_21_12785001 chrX_12785001 CanS-SH 2827 chrX 12790357 12790398 chrX 12790512 12790553 9 155 10.0 10.5 10.2 0.8 196 chrX 12790357 3` UTR Pde9 - chrX 12790455 3` UTR Pde9 - chrX 12790553 3` UTR Pde9 - chrX_9_12790001 chrX_12790001 CanS-SH 2828 chrX 12912570 12912589 chrX 12912744 12912763 7 174 6.5 6.0 6.2 1.0 193 chrX 12912570 5` UTR CR45625 + chrX 12912666 5` UTR CR45625 + chrX 12912763 5` UTR CR45625 + chrX_7_12910001 chrX_12910001 CanS-SH 2829 chrX 12930525 12930553 chrX 12937716 12937744 HMS-Beagle 5 7191 13.5 11.5 12.5 0.4 7219 chrX 12930525 intron fne + chrX 12934134 intron fne + chrX 12937744 intron fne + chrX_5_12930001 chrX_12930001 CanS-SH 2830 chrX 12953822 12953850 chrX 12954035 12954063 7 213 15.5 3.5 9.5 0.7 241 chrX 12953822 exon hec - chrX 12953942 intron hec - chrX 12954063 intron hec - chrX_7_12950001 chrX_12950001 CanS-SH 2831 chrX 12976995 12977042 chrX 12977146 12977193 9 151 4.0 10.5 7.2 1.1 198 chrX 12976995 intergenic not near genes chrX 12977094 intergenic not near genes chrX 12977193 intergenic not near genes chrX_9_12975001 chrX_12975001 CanS-SH 2832 chrX 13146553 13146605 chrX 13146716 13146768 17 163 7.0 8.5 7.8 1.9 215 chrX 13146553 intron CG32645 + chrX 13146660 intron CG32645 + chrX 13146768 intron CG32645 + chrX_17_13145001 chrX_13145001 CanS-SH 2833 chrX 13236804 13236897 chrX 13236961 13237057 15 158 5.0 6.0 5.5 2.3 253 chrX 13236804 intron mew - chrX 13236930 intron mew - chrX 13237057 intron mew - chrX_15_13235001 chrX_13235001 CanS-SH 2834 chrX 13278101 13278181 chrX 13278259 13278339 13 158 7.5 4.5 6.0 1.9 238 chrX 13278101 intron HDAC4 - chrX 13278220 intron HDAC4 - chrX 13278339 intron HDAC4 - chrX_13_13275001 chrX_13275001 CanS-SH 2835 chrX 13329240 13329315 chrX 13329413 13329485 9 172 6.0 0.5 3.2 2.1 245 chrX 13329240 3` UTR IP3K2 + chrX 13329362 intergenic IP3K2 +,Jafrac1 + chrX 13329485 intergenic IP3K2 +,Jafrac1 + chrX_9_13325001 chrX_13325001 CanS-SH 2836 chrX 13374813 13374859 chrX 13374968 13375013 8 154 6.0 11.0 8.5 0.8 200 chrX 13374813 intron CG1640 + chrX 13374913 intron CG1640 + chrX 13375013 intron CG1640 + chrX_8_13370001 chrX_13370001 CanS-SH 2837 chrX 13401416 13401461 chrX 13401843 13401888 jockey 8 427 2.5 5.0 3.8 1.7 472 chrX 13401416 intergenic CG1673 +,CG12725 - chrX 13401652 intergenic CG12725 -,CG1673 + chrX 13401888 3` UTR CG12725 - chrX_8_13400001 chrX_13400001 CanS-SH 2838 chrX 13429388 13429420 chrX 13430612 13430644 jockey 15 1224 7.0 6.0 6.5 2.0 1256 chrX 13429388 intergenic not near genes chrX 13430016 intergenic not near genes chrX 13430644 intergenic not near genes chrX_15_13430001 chrX_13430001 CanS-SH 2839 chrX 13442048 13442147 chrX 13442230 13442313 10 168 0.0 5.0 2.5 2.9 265 chrX 13442048 intergenic not near genes chrX 13442180 intergenic not near genes chrX 13442313 intergenic not near genes chrX_10_13440001 chrX_13440001 CanS-SH 2840 chrX 13463587 13463621 chrX 13469239 13469273 mdg3 7 5652 3.5 8.5 6.0 1.0 5686 chrX 13463587 intron Neto + chrX 13466430 intron Neto + chrX 13469273 intron Neto + chrX_7_13465001 chrX_13465001 CanS-SH 2841 chrX 13471345 13471387 chrX 13471503 13471545 14 158 8.5 13.0 10.8 1.2 200 chrX 13471345 intron Neto + chrX 13471445 intron Neto + chrX 13471545 intron Neto + chrX_14_13470001 chrX_13470001 CanS-SH 2842 chrX 13734020 13734103 chrX 13734191 13734274 19 171 6.5 4.0 5.2 3.1 254 chrX 13734020 intron g - chrX 13734147 intron g - chrX 13734274 intron g - chrX_19_13730001 chrX_13730001 CanS-SH 2843 chrX 13937915 13937946 chrX 13941261 13941292 I-element 14 3346 12.5 4.0 8.2 1.5 3377 chrX 13937915 intron mamo - chrX 13939604 intron mamo - chrX 13941292 intron mamo - chrX_14_13935001 chrX_13935001 CanS-SH 2844 chrX 14023053 14023077 chrX 14023221 14023245 9 168 7.5 7.5 7.5 1.1 192 chrX 14023053 intergenic not near genes chrX 14023149 intergenic not near genes chrX 14023245 intergenic not near genes chrX_9_14020001 chrX_14020001 CanS-SH 2845 chrX 14030680 14030717 chrX 14035341 14035378 copia 10 4661 16.0 4.5 10.2 0.9 4698 chrX 14030680 intergenic not near genes chrX 14033029 intergenic not near genes chrX 14035378 intergenic not near genes chrX_10_14030001 chrX_14030001 CanS-SH 2846 chrX 14064073 14064166 chrX 14064245 14064338 6 172 0.0 1.5 0.8 3.3 265 chrX 14064073 intergenic not near genes chrX 14064206 intergenic not near genes chrX 14064338 intergenic not near genes chrX_6_14060001 chrX_14060001 CanS-SH 2847 chrX 14104962 14104997 chrX 14114188 14114223 roo 10 9226 13.5 5.5 9.5 1.0 9261 chrX 14104962 intergenic not near genes chrX 14109592 intergenic not near genes chrX 14114223 5` UTR CR44657 + chrX_10_14105001 chrX_14105001 CanS-SH 2848 chrX 14122550 14122623 chrX 14122701 14122774 20 151 6.0 7.5 6.8 2.6 224 chrX 14122550 intergenic not near genes chrX 14122662 intergenic not near genes chrX 14122774 intergenic not near genes chrX_20_14120001 chrX_14120001 CanS-SH 2849 chrX 14131406 14131493 chrX 14131569 14131649 14 162 6.0 4.0 5.0 2.3 243 chrX 14131406 intergenic not near genes chrX 14131528 intergenic not near genes chrX 14131649 intergenic not near genes chrX_14_14130001 chrX_14130001 CanS-SH 2850 chrX 14157528 14157542 chrX 14163260 14163273 297 5 5732 17.0 7.0 12.0 0.4 5745 chrX 14157528 intergenic not near genes chrX 14160400 intergenic not near genes chrX 14163273 intergenic not near genes chrX_5_14160001 chrX_14160001 CanS-SH 2851 chrX 14209395 14209477 chrX 14209561 14209643 23 166 6.5 6.5 6.5 3.1 248 chrX 14209395 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209519 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209643 intron,intron l(1)G0007 +,l(1)G0469 - chrX_23_14205001 chrX_14205001 CanS-SH 2852 chrX 14216728 14216774 chrX 14216888 14216934 15 160 10.0 4.5 7.2 1.8 206 chrX 14216728 intron l(1)G0007 + chrX 14216831 intron l(1)G0007 + chrX 14216934 intron l(1)G0007 + chrX_15_14215001 chrX_14215001 CanS-SH 2853 chrX 14366463 14366525 chrX 14366618 14366680 22 155 4.0 4.0 4.0 4.4 217 chrX 14366463 intron dpr8 + chrX 14366572 intron dpr8 + chrX 14366680 intron dpr8 + chrX_22_14365001 chrX_14365001 CanS-SH 2854 chrX 14381346 14381412 chrX 14381575 14381641 6 229 3.5 3.0 3.2 1.4 295 chrX 14381346 intron,3` UTR dpr8 +,betaNACtes4 + chrX 14381494 intron dpr8 + chrX 14381641 intron dpr8 + chrX_6_14380001 chrX_14380001 CanS-SH 2855 chrX 14383892 14383940 chrX 14384051 14384099 10 159 6.5 10.5 8.5 1.1 207 chrX 14383892 intron dpr8 + chrX 14383996 intron dpr8 + chrX 14384099 intron dpr8 + chrX_10_14380001 chrX_14380001 CanS-SH 2856 chrX 14404950 14405017 chrX 14405103 14405170 19 153 3.5 6.0 4.8 3.3 220 chrX 14404950 intron dpr8 + chrX 14405060 intron dpr8 + chrX 14405170 intron dpr8 + chrX_19_14405001 chrX_14405001 CanS-SH 2857 chrX 14411958 14411985 chrX 14412114 14412141 6 156 9.0 12.5 10.8 0.5 183 chrX 14411958 intron dpr8 + chrX 14412050 intron dpr8 + chrX 14412141 intron dpr8 + chrX_6_14410001 chrX_14410001 CanS-SH 2858 chrX 14414154 14414245 chrX 14414306 14414397 19 152 4.0 5.0 4.5 3.5 243 chrX 14414154 intron dpr8 + chrX 14414276 intron dpr8 + chrX 14414397 intron dpr8 + chrX_19_14410001 chrX_14410001 CanS-SH 2859 chrX 14416254 14416277 chrX 14421096 14421119 F-element 7 4842 9.0 4.0 6.5 0.9 4865 chrX 14416254 intron dpr8 + chrX 14418686 intron dpr8 + chrX 14421119 intron dpr8 + chrX_7_14415001 chrX_14415001 CanS-SH 2860 chrX 14559603 14559668 chrX 14559774 14559839 18 171 6.5 7.5 7.0 2.2 236 chrX 14559603 intergenic not near genes chrX 14559721 intergenic not near genes chrX 14559839 intergenic not near genes chrX_18_14555001 chrX_14555001 CanS-SH 2861 chrX 14561710 14561792 chrX 14562120 14562202 9 410 3.5 4.5 4.0 1.8 492 chrX 14561710 intergenic not near genes chrX 14561956 intergenic not near genes chrX 14562202 intergenic not near genes chrX_9_14560001 chrX_14560001 CanS-SH 2862 chrX 14597668 14597746 chrX 14597820 14597898 16 152 6.5 10.0 8.2 1.7 230 chrX 14597668 intron CG9413 - chrX 14597783 intron CG9413 - chrX 14597898 intron CG9413 - chrX_16_14595001 chrX_14595001 CanS-SH 2863 chrX 14636403 14636436 chrX 14641919 14641952 I-element 10 5516 11.0 7.5 9.2 1.0 5549 chrX 14636403 intron NetA - chrX 14639178 intron NetA - chrX 14641952 intron NetA - chrX_10_14635001 chrX_14635001 CanS-SH 2864 chrX 14649293 14649296 chrX 14649444 14649447 4 151 6.0 12.0 9.0 0.4 154 chrX 14649293 intron NetA - chrX 14649370 intron NetA - chrX 14649447 intron NetA - chrX_4_14645001 chrX_14645001 CanS-SH 2865 chrX 14713969 14714065 chrX 14714126 14714222 26 157 4.5 4.5 4.5 4.7 253 chrX 14713969 intron NetB - chrX 14714096 intron NetB - chrX 14714222 intron NetB - chrX_26_14710001 chrX_14710001 CanS-SH 2866 chrX 14767881 14767927 chrX 14768036 14768082 16 155 8.0 0.0 4.0 3.2 201 chrX 14767881 intergenic not near genes chrX 14767982 intergenic not near genes chrX 14768082 intergenic not near genes chrX_16_14765001 chrX_14765001 CanS-SH 2867 chrX 14771435 14771454 chrX 14771634 14771653 6 199 11.0 8.0 9.5 0.6 218 chrX 14771435 intergenic not near genes chrX 14771544 intergenic not near genes chrX 14771653 intergenic not near genes chrX_6_14770001 chrX_14770001 CanS-SH 2868 chrX 14777984 14778002 chrX 14782856 14782874 Doc 9 4872 13.5 8.5 11.0 0.8 4890 chrX 14777984 intergenic CG5347 + chrX 14780429 intergenic not near genes chrX 14782874 intergenic Ag5r2 - chrX_9_14780001 chrX_14780001 CanS-SH 2869 chrX 14813675 14813757 chrX 14813828 14813910 18 153 6.0 8.0 7.0 2.2 235 chrX 14813675 intron rut - chrX 14813792 intron rut - chrX 14813910 intron rut - chrX_18_14810001 chrX_14810001 CanS-SH 2870 chrX 14818700 14818742 chrX 14823979 14824021 copia 16 5279 15.5 13.5 14.5 1.0 5321 chrX 14818700 intron rut - chrX 14821360 intron rut - chrX 14824021 intron rut - chrX_16_14820001 chrX_14820001 CanS-SH 2871 chrX 14936797 14936836 chrX 14946129 14946168 roo 12 9332 14.0 7.5 10.8 1.0 9371 chrX 14936797 intron pdgy - chrX 14941482 intron pdgy - chrX 14946168 intron pdgy - chrX_12_14940001 chrX_14940001 CanS-SH 2872 chrX 14950079 14950085 chrX 14950231 14950237 5 152 9.5 7.5 8.5 0.5 158 chrX 14950079 intron pdgy - chrX 14950158 intron pdgy - chrX 14950237 intron pdgy - chrX_5_14950001 chrX_14950001 CanS-SH 2873 chrX 14968030 14968083 chrX 14968184 14968237 11 154 3.0 8.0 5.5 1.7 207 chrX 14968030 intron eag + chrX 14968134 intron eag + chrX 14968237 intron eag + chrX_11_14965001 chrX_14965001 CanS-SH 2874 chrX 14976478 14976499 chrX 14976995 14977016 5 517 6.0 8.0 7.0 0.6 538 chrX 14976478 intron eag + chrX 14976747 intron eag + chrX 14977016 intron eag + chrX_5_14975001 chrX_14975001 CanS-SH 2875 chrX 14981656 14981734 chrX 14981810 14981888 16 154 5.0 4.5 4.8 2.8 232 chrX 14981656 intron eag + chrX 14981772 intron eag + chrX 14981888 intron eag + chrX_16_14980001 chrX_14980001 CanS-SH 2876 chrX 15034042 15034065 chrX 15041644 15041667 rover 10 7603 8.5 6.5 7.5 1.2 7625 chrX 15034042 intron,3` UTR hiw -,be + chrX 15037854 intron,intron hiw -,be + chrX 15041667 intron,3` UTR hiw -,be + chrX_10_15035001 chrX_15035001 CanS-SH 2877 chrX 15059105 15059146 chrX 15059286 15059327 14 181 12.0 5.0 8.5 1.5 222 chrX 15059105 exon hiw - chrX 15059216 intron hiw - chrX 15059327 intron hiw - chrX_14_15055001 chrX_15055001 CanS-SH 2878 chrX 15068609 15068698 chrX 15068863 15068953 15 255 9.5 7.0 8.2 1.6 344 chrX 15068609 exon dob + chrX 15068781 exon dob + chrX 15068953 3` UTR dob + chrX_15_15065001 chrX_15065001 CanS-SH 2879 chrX 15126447 15126510 chrX 15126616 15126679 17 169 10.5 6.5 8.5 1.8 232 chrX 15126447 intron drd + chrX 15126563 intron drd + chrX 15126679 intron drd + chrX_17_15125001 chrX_15125001 CanS-SH 2880 chrX 15195806 15195897 chrX 15195976 15196073 5 174 6.0 6.0 6.0 0.7 267 chrX 15195806 intergenic not near genes chrX 15195940 intergenic not near genes chrX 15196073 intergenic not near genes chrX_5_15195001 chrX_15195001 CanS-SH 2881 chrX 15200596 15200636 chrX 15200747 15200787 13 151 11.5 8.0 9.8 1.2 191 chrX 15200596 intergenic not near genes chrX 15200692 intergenic not near genes chrX 15200787 intergenic not near genes chrX_13_15200001 chrX_15200001 CanS-SH 2882 chrX 15217219 15217282 chrX 15217378 15217441 8 159 5.0 4.5 4.8 1.4 222 chrX 15217219 intergenic not near genes chrX 15217330 intergenic not near genes chrX 15217441 intergenic not near genes chrX_8_15215001 chrX_15215001 CanS-SH 2883 chrX 15260062 15260150 chrX 15260216 15260302 10 154 0.0 0.0 0.0 10.0 240 chrX 15260062 intergenic not near genes chrX 15260182 intergenic not near genes chrX 15260302 intergenic not near genes chrX_10_15260001 chrX_15260001 CanS-SH 2884 chrX 15268821 15268864 chrX 15268976 15269019 5 155 7.0 9.5 8.2 0.5 198 chrX 15268821 intergenic not near genes chrX 15268920 intergenic not near genes chrX 15269019 intergenic not near genes chrX_5_15265001 chrX_15265001 CanS-SH 2885 chrX 15273656 15273685 chrX 15274898 15274927 1360 16 1242 14.5 8.5 11.5 1.3 1271 chrX 15273656 intergenic not near genes chrX 15274292 intergenic not near genes chrX 15274927 intergenic not near genes chrX_16_15270001 chrX_15270001 CanS-SH 2886 chrX 15292042 15292111 chrX 15292205 15292274 18 163 12.5 3.5 8.0 2.0 232 chrX 15292042 intergenic not near genes chrX 15292158 intergenic not near genes chrX 15292274 intergenic not near genes chrX_18_15290001 chrX_15290001 CanS-SH 2887 chrX 15326674 15326714 chrX 15326947 15326987 I-element 6 273 2.5 5.5 4.0 1.2 313 chrX 15326674 3` UTR Top1 + chrX 15326830 3` UTR Top1 + chrX 15326987 3` UTR Top1 + chrX_6_15325001 chrX_15325001 CanS-SH 2888 chrX 15369768 15369826 chrX 15369926 15369984 19 158 11.0 7.0 9.0 1.9 216 chrX 15369768 intron acj6 - chrX 15369876 intron acj6 - chrX 15369984 intron acj6 - chrX_19_15365001 chrX_15365001 CanS-SH 2889 chrX 15412990 15413025 chrX 15417367 15417401 Juan 10 4377 14.5 0.0 7.2 1.2 4411 chrX 15412990 intron Cngl - chrX 15415196 intron Cngl - chrX 15417401 intron Cngl - chrX_10_15415001 chrX_15415001 CanS-SH 2890 chrX 15435609 15435626 chrX 15436119 15436134 rover 8 508 12.0 6.5 9.2 0.8 525 chrX 15435609 intron Cngl - chrX 15435872 intron Cngl - chrX 15436134 intron Cngl - chrX_8_15435001 chrX_15435001 CanS-SH 2891 chrX 15525867 15525938 chrX 15526020 15526091 19 153 10.5 10.5 10.5 1.7 224 chrX 15525867 intron Ac13E - chrX 15525979 intron Ac13E - chrX 15526091 intron Ac13E - chrX_19_15525001 chrX_15525001 CanS-SH 2892 chrX 15565563 15565662 chrX 15565724 15565825 12 161 3.5 5.5 4.5 2.2 262 chrX 15565563 intergenic not near genes chrX 15565694 intergenic not near genes chrX 15565825 intergenic not near genes chrX_12_15565001 chrX_15565001 CanS-SH 2893 chrX 8848905 8848906 chrX 15627327 15627327 7 6778421 32.5 20.5 26.5 0.3 6778422 chrX 8848905 intron CG12075 + chrX 12238116 intron Ten-a + chrX 15627327 intron sog - chrX_7_12235001 chrX_12235001 CanS-SH 2894 chrX 15671329 15671411 chrX 15671491 15671572 21 162 8.0 6.5 7.2 2.6 243 chrX 15671329 intergenic CG15646 - chrX 15671450 intergenic CG15646 - chrX 15671572 intergenic not near genes chrX_21_15670001 chrX_15670001 CanS-SH 2895 chrX 15677965 15677992 chrX 15678118 15678145 10 153 11.5 6.0 8.8 1.0 180 chrX 15677965 intergenic CG12708 + chrX 15678055 intergenic CG12708 + chrX 15678145 intergenic CG12708 + chrX_10_15675001 chrX_15675001 CanS-SH 2896 chrX 15681336 15681421 chrX 15681493 15681578 20 157 7.5 5.0 6.2 2.8 242 chrX 15681336 intergenic not near genes chrX 15681457 intergenic not near genes chrX 15681578 intergenic not near genes chrX_20_15680001 chrX_15680001 CanS-SH 2897 chrX 15749577 15749620 chrX 15749759 15749802 13 182 7.5 6.0 6.8 1.7 225 chrX 15749577 intron CG8239 + chrX 15749690 intron CG8239 + chrX 15749802 intron CG8239 + chrX_13_15745001 chrX_15745001 CanS-SH 2898 chrX 16074102 16074162 chrX 16074513 16074573 8 411 0.0 12.0 6.0 1.1 471 chrX 16074102 intergenic not near genes chrX 16074338 intergenic Tob - chrX 16074573 intergenic Tob - chrX_8_16070001 chrX_16070001 CanS-SH 2899 chrX 16109687 16109700 chrX 16109846 16109859 7 159 6.0 0.0 3.0 1.8 172 chrX 16109687 intergenic not near genes chrX 16109773 intergenic not near genes chrX 16109859 intergenic not near genes chrX_7_16105001 chrX_16105001 CanS-SH 2900 chrX 16221063 16221083 chrX 16221222 16221242 8 159 15.0 6.0 10.5 0.7 179 chrX 16221063 intergenic not near genes chrX 16221152 intergenic not near genes chrX 16221242 intergenic not near genes chrX_8_16220001 chrX_16220001 CanS-SH 2901 chrX 16222741 16222799 chrX 16231166 16231224 roo 7 8425 0.0 13.0 6.5 0.9 8483 chrX 16222741 intergenic not near genes chrX 16226982 intergenic not near genes chrX 16231224 intergenic not near genes chrX_7_16225001 chrX_16225001 CanS-SH 2902 chrX 16234988 16235069 chrX 16235150 16235231 8 162 3.0 6.0 4.5 1.5 243 chrX 16234988 intergenic not near genes chrX 16235110 intergenic not near genes chrX 16235231 intergenic not near genes chrX_8_16235001 chrX_16235001 CanS-SH 2903 chrX 16245878 16245925 chrX 16246060 16246107 INE-1 24 182 13.0 5.0 9.0 2.4 229 chrX 16245878 intergenic not near genes chrX 16245992 intergenic not near genes chrX 16246107 intergenic not near genes chrX_24_16245001 chrX_16245001 CanS-SH 2904 chrX 16295463 16295550 chrX 16295622 16295703 11 155 4.5 0.0 2.2 3.4 240 chrX 16295463 intron CG9911 - chrX 16295583 intron CG9911 - chrX 16295703 intron CG9911 - chrX_11_16295001 chrX_16295001 CanS-SH 2905 chrX 16329359 16329400 chrX 16329513 16329554 18 154 7.5 6.5 7.0 2.2 195 chrX 16329359 exon CG9919 - chrX 16329456 intron CG9919 - chrX 16329554 exon CG9919 - chrX_18_16325001 chrX_16325001 CanS-SH 2906 chrX 16339388 16339467 chrX 16339544 16339623 23 156 11.0 6.5 8.8 2.3 235 chrX 16339388 3` UTR Dsp1 + chrX 16339506 3` UTR Dsp1 + chrX 16339623 3` UTR Dsp1 + chrX_23_16335001 chrX_16335001 CanS-SH 2907 chrX 16340593 16340625 chrX 16349823 16349855 roo 13 9230 16.5 6.0 11.2 1.1 9262 chrX 16340593 3` UTR Dsp1 + chrX 16345224 intergenic not near genes chrX 16349855 intergenic sl + chrX_13_16345001 chrX_16345001 CanS-SH 2908 chrX 16356453 16356545 chrX 16356646 16356738 12 193 8.0 5.0 6.5 1.6 285 chrX 16356453 3` UTR sl + chrX 16356596 intergenic U2af50 -,sl + chrX 16356738 3` UTR U2af50 - chrX_12_16355001 chrX_16355001 CanS-SH 2909 chrX 16492586 16492624 chrX 16498238 16498276 mdg3 9 5652 8.0 9.5 8.8 0.9 5690 chrX 16492586 intron para - chrX 16495431 intron para - chrX 16498276 exon para - chrX_9_16495001 chrX_16495001 CanS-SH 2910 chrX 16525203 16525279 chrX 16525363 16525439 20 160 6.5 7.5 7.0 2.5 236 chrX 16525203 intron,exon para -,Cnx14D - chrX 16525321 intron,5` UTR para -,Cnx14D - chrX 16525439 intron para - chrX_20_16525001 chrX_16525001 CanS-SH 2911 chrX 16569640 16569678 chrX 16569796 16569834 6 156 6.0 7.5 6.8 0.8 194 chrX 16569640 intron CanA-14F - chrX 16569737 intron CanA-14F - chrX 16569834 intron CanA-14F - chrX_6_16565001 chrX_16565001 CanS-SH 2912 chrX 16583985 16584036 chrX 16584170 16584221 15 185 15.0 5.5 10.2 1.3 236 chrX 16583985 intron CanA-14F - chrX 16584103 intron CanA-14F - chrX 16584221 intron CanA-14F - chrX_15_16580001 chrX_16580001 CanS-SH 2913 chrX 16670607 16670809 chrX 16670762 16670978 5 163 1.5 1.5 1.5 2.0 371 chrX 16670607 intron CG13012 - chrX 16670792 intron CG13012 - chrX 16670978 intron CG13012 - chrX_5_16670001 chrX_16670001 CanS-SH 2914 chrX 16687503 16687523 chrX 16687659 16687679 6 156 7.0 10.5 8.8 0.6 176 chrX 16687503 intron Sep4 - chrX 16687591 intron Sep4 - chrX 16687679 intron Sep4 - chrX_6_16685001 chrX_16685001 CanS-SH 2915 chrX 16689554 16689641 chrX 16689715 16689802 21 161 3.0 4.0 3.5 4.7 248 chrX 16689554 intron Sep4 - chrX 16689678 intron Sep4 - chrX 16689802 intron Sep4 - chrX_21_16685001 chrX_16685001 CanS-SH 2916 chrX 16707064 16707153 chrX 16707253 16707338 10 189 1.0 6.0 3.5 2.2 274 chrX 16707064 intron CG4678 + chrX 16707201 intron CG4678 + chrX 16707338 intron CG4678 + chrX_10_16705001 chrX_16705001 CanS-SH 2917 chrX 16707923 16707976 chrX 16708132 16708185 6 209 2.5 6.0 4.2 1.2 262 chrX 16707923 exon CG4678 + chrX 16708054 intron CG4678 + chrX 16708185 exon CG4678 + chrX_6_16705001 chrX_16705001 CanS-SH 2918 chrX 16714603 16714616 chrX 16714758 16714771 6 155 9.0 10.0 9.5 0.6 168 chrX 16714603 3` UTR CG34325 - chrX 16714687 3` UTR CG34325 - chrX 16714771 3` UTR CG34325 - chrX_6_16710001 chrX_16710001 CanS-SH 2919 chrX 16762517 16762593 chrX 16762730 16762817 11 223 6.5 1.0 3.8 2.3 300 chrX 16762517 intron if - chrX 16762667 intron if - chrX 16762817 intron if - chrX_11_16760001 chrX_16760001 CanS-SH 2920 chrX 16821199 16821234 chrX 16821355 16821389 4 156 7.5 1.5 4.5 0.7 190 chrX 16821199 intron CG4829 + chrX 16821294 intron CG4829 + chrX 16821389 intron CG4829 + chrX_4_16820001 chrX_16820001 CanS-SH 2921 chrX 16853791 16853863 chrX 16853949 16854021 7 158 9.5 8.0 8.8 0.7 230 chrX 16853791 intron CG13003 - chrX 16853906 intron CG13003 - chrX 16854021 intron CG13003 - chrX_7_16850001 chrX_16850001 CanS-SH 2922 chrX 16867726 16867772 chrX 16867879 16867925 14 153 5.5 5.0 5.2 2.3 199 chrX 16867726 intron CG13003 - chrX 16867826 intron CG13003 - chrX 16867925 intron CG13003 - chrX_14_16865001 chrX_16865001 CanS-SH 2923 chrX 16869623 16869664 chrX 16869781 16869822 11 158 8.0 10.5 9.2 1.1 199 chrX 16869623 intron CG13003 - chrX 16869722 intron CG13003 - chrX 16869822 intron CG13003 - chrX_11_16865001 chrX_16865001 CanS-SH 2924 chrX 16870011 16870095 chrX 16870168 16870253 20 157 6.0 7.0 6.5 2.7 242 chrX 16870011 intron CG13003 - chrX 16870132 intron CG13003 - chrX 16870253 intron CG13003 - chrX_20_16870001 chrX_16870001 CanS-SH 2925 chrX 16915872 16915904 chrX 16916031 16916063 6 159 0.0 8.0 4.0 1.2 191 chrX 16915872 intron CG4928 + chrX 16915968 intron CG4928 + chrX 16916063 intron CG4928 + chrX_6_16915001 chrX_16915001 CanS-SH 2926 chrX 16935935 16935968 chrX 16936428 16936461 jockey 4 493 11.5 3.0 7.2 0.5 526 chrX 16935935 intron CG4928 + chrX 16936198 intron CG4928 + chrX 16936461 intron CG4928 + chrX_4_16935001 chrX_16935001 CanS-SH 2927 chrX 16944079 16944166 chrX 16944281 16944368 13 202 51.5 42.5 47.0 0.3 289 chrX 16944079 intron RhoGAP15B + chrX 16944224 intron RhoGAP15B + chrX 16944368 intron RhoGAP15B + chrX_13_16940001 chrX_16940001 CanS-SH 2928 chrX 16951255 16951341 chrX 16951410 16951496 21 155 7.5 4.0 5.8 3.1 241 chrX 16951255 exon RhoGAP15B + chrX 16951376 exon RhoGAP15B + chrX 16951496 exon RhoGAP15B + chrX_21_16950001 chrX_16950001 CanS-SH 2929 chrX 17011899 17011987 chrX 17012057 17012144 20 158 9.0 6.0 7.5 2.4 245 chrX 17011899 intron CG45002 - chrX 17012022 intron CG45002 - chrX 17012144 intron CG45002 - chrX_20_17010001 chrX_17010001 CanS-SH 2930 chrX 17014406 17014484 chrX 17014598 17014676 5 192 7.5 8.5 8.0 0.6 270 chrX 17014406 intron CG45002 - chrX 17014541 intron CG45002 - chrX 17014676 intron CG45002 - chrX_5_17010001 chrX_17010001 CanS-SH 2931 chrX 17046753 17046798 chrX 17046921 17046966 9 168 18.5 6.0 12.2 0.7 213 chrX 17046753 intron CG45002 - chrX 17046860 intron CG45002 - chrX 17046966 intron CG45002 - chrX_9_17045001 chrX_17045001 CanS-SH 2932 chrX 17057887 17057914 chrX 17058203 17058230 pogo 11 316 1.5 6.0 3.8 2.3 343 chrX 17057887 intron CG45002 - chrX 17058058 intron CG45002 - chrX 17058230 intron CG45002 - chrX_11_17055001 chrX_17055001 CanS-SH 2933 chrX 17111161 17111253 chrX 17111357 17111450 13 196 7.0 6.0 6.5 1.7 289 chrX 17111161 intron CG5004 + chrX 17111306 intron CG5004 + chrX 17111450 intron CG5004 + chrX_13_17110001 chrX_17110001 CanS-SH 2934 chrX 17119714 17119731 chrX 17119883 17119900 7 169 0.0 10.0 5.0 1.2 186 chrX 17119714 intron CG5004 + chrX 17119807 intron CG5004 + chrX 17119900 intron CG5004 + chrX_7_17115001 chrX_17115001 CanS-SH 2935 chrX 17195146 17195176 chrX 17200307 17200337 flea 9 5161 15.5 7.5 11.5 0.7 5191 chrX 17195146 3` UTR baz + chrX 17197742 3` UTR baz + chrX 17200337 3` UTR baz + chrX_9_17195001 chrX_17195001 CanS-SH 2936 chrX 17205774 17205855 chrX 17205939 17206020 22 165 7.5 7.0 7.2 2.7 246 chrX 17205774 intergenic not near genes chrX 17205897 intergenic not near genes chrX 17206020 intergenic CG32564 + chrX_22_17205001 chrX_17205001 CanS-SH 2937 chrX 17229881 17229965 chrX 17230059 17230143 19 178 7.0 3.5 5.2 3.1 262 chrX 17229881 intergenic CG10597 - chrX 17230012 intergenic CG10597 - chrX 17230143 intergenic CG10597 - chrX_19_17230001 chrX_17230001 CanS-SH 2938 chrX 17234199 17234293 chrX 17234367 17234465 10 171 3.0 0.0 1.5 4.0 266 chrX 17234199 intron f + chrX 17234332 intron f + chrX 17234465 intron f + chrX_10_17230001 chrX_17230001 CanS-SH 2939 chrX 17237462 17237536 chrX 17237621 17237695 11 159 4.0 5.5 4.8 1.9 233 chrX 17237462 intron f + chrX 17237578 intron f + chrX 17237695 intron f + chrX_11_17235001 chrX_17235001 CanS-SH 2940 chrX 17343303 17343378 chrX 17343467 17343538 8 162 0.0 5.0 2.5 2.3 235 chrX 17343303 intergenic not near genes chrX 17343420 intergenic not near genes chrX 17343538 intergenic not near genes chrX_8_17340001 chrX_17340001 CanS-SH 2941 chrX 17352528 17352569 chrX 17352697 17352737 15 169 10.5 6.0 8.2 1.6 209 chrX 17352528 intergenic not near genes chrX 17352632 intergenic not near genes chrX 17352737 intergenic not near genes chrX_15_17350001 chrX_17350001 CanS-SH 2942 chrX 17357477 17357500 chrX 17357646 17357669 6 169 8.0 0.0 4.0 1.2 192 chrX 17357477 intergenic not near genes chrX 17357573 intergenic not near genes chrX 17357669 intergenic not near genes chrX_6_17355001 chrX_17355001 CanS-SH 2943 chrX 17431291 17431331 chrX 17431707 17431747 jockey 10 416 13.5 2.0 7.8 1.1 456 chrX 17431291 intron CG12994 - chrX 17431519 intron CG12994 - chrX 17431747 intron CG12994 - chrX_10_17430001 chrX_17430001 CanS-SH 2944 chrX 17443052 17443088 chrX 17443251 17443287 7 199 7.0 5.0 6.0 1.0 235 chrX 17443052 intron CG12994 - chrX 17443170 intron CG12994 - chrX 17443287 intron CG12994 - chrX_7_17440001 chrX_17440001 CanS-SH 2945 chrX 17544944 17545022 chrX 17545101 17545179 30 157 10.0 10.5 10.2 2.7 235 chrX 17544944 intron CG43658 - chrX 17545062 intron CG43658 - chrX 17545179 intron CG43658 - chrX_30_17545001 chrX_17545001 CanS-SH 2946 chrX 17546029 17546088 chrX 17546757 17546816 9 729 1.0 0.0 0.5 6.0 787 chrX 17546029 intron CG43658 - chrX 17546422 intron CG43658 - chrX 17546816 intron CG43658 - chrX_9_17545001 chrX_17545001 CanS-SH 2947 chrX 17546902 17546992 chrX 17547110 17547200 9 208 0.0 8.0 4.0 1.8 298 chrX 17546902 intron CG43658 - chrX 17547051 intron CG43658 - chrX 17547200 intron CG43658 - chrX_9_17545001 chrX_17545001 CanS-SH 2948 chrX 17685382 17685461 chrX 17685541 17685619 7 158 0.5 4.0 2.2 2.2 237 chrX 17685382 intron chas - chrX 17685500 intron chas - chrX 17685619 intron chas - chrX_7_17685001 chrX_17685001 CanS-SH 2949 chrX 17695807 17695848 chrX 17695959 17696000 9 152 5.0 13.0 9.0 0.9 193 chrX 17695807 intron chas - chrX 17695904 intron chas - chrX 17696000 intron chas - chrX_9_17695001 chrX_17695001 CanS-SH 2950 chrX 17784428 17784486 chrX 17784579 17784637 17 151 2.0 9.0 5.5 2.6 209 chrX 17784428 intergenic not near genes chrX 17784532 intergenic not near genes chrX 17784637 intergenic not near genes chrX_17_17780001 chrX_17780001 CanS-SH 2951 chrX 17812319 17812371 chrX 17812476 17812531 11 160 7.5 5.5 6.5 1.5 212 chrX 17812319 intron OdsH + chrX 17812425 intron OdsH + chrX 17812531 intron OdsH + chrX_11_17810001 chrX_17810001 CanS-SH 2952 chrX 17911781 17911853 chrX 17911942 17912016 12 163 4.5 4.0 4.2 2.3 235 chrX 17911781 intron CG6847 + chrX 17911898 intron CG6847 + chrX 17912016 intron CG6847 + chrX_12_17910001 chrX_17910001 CanS-SH 2953 chrX 17968832 17968867 chrX 17969026 17969061 9 194 13.5 3.5 8.5 0.9 229 chrX 17968832 intron Sh - chrX 17968946 intron Sh - chrX 17969061 intron Sh - chrX_9_17965001 chrX_17965001 CanS-SH 2954 chrX 18142320 18142346 chrX 18142474 18142500 8 154 11.0 12.0 11.5 0.6 180 chrX 18142320 intergenic not near genes chrX 18142410 intergenic not near genes chrX 18142500 intergenic not near genes chrX_8_18140001 chrX_18140001 CanS-SH 2955 chrX 18148566 18148592 chrX 18148743 18148770 11 178 0.0 4.5 2.2 3.4 204 chrX 18148566 intergenic not near genes chrX 18148668 intergenic not near genes chrX 18148770 intergenic not near genes chrX_11_18145001 chrX_18145001 CanS-SH 2956 chrX 18175453 18175468 chrX 18175613 18175627 5 160 0.0 7.5 3.8 1.0 174 chrX 18175453 intergenic not near genes chrX 18175540 intergenic not near genes chrX 18175627 intergenic not near genes chrX_5_18175001 chrX_18175001 CanS-SH 2957 chrX 18176957 18176993 chrX 18177125 18177161 5 168 11.0 2.0 6.5 0.7 204 chrX 18176957 intergenic not near genes chrX 18177059 intergenic not near genes chrX 18177161 intergenic Frq2 + chrX_5_18175001 chrX_18175001 CanS-SH 2958 chrX 18194006 18194047 chrX 18194616 18194657 BS 9 610 11.0 6.5 8.8 0.9 651 chrX 18194006 intron Frq2 + chrX 18194332 intron Frq2 + chrX 18194657 intron Frq2 + chrX_9_18190001 chrX_18190001 CanS-SH 2959 chrX 18256965 18257029 chrX 18257135 18257199 21 170 9.0 8.5 8.8 2.1 234 chrX 18256965 3` UTR CR45613 - chrX 18257082 3` UTR CR45613 - chrX 18257199 3` UTR CR45613 - chrX_21_18255001 chrX_18255001 CanS-SH 2960 chrX 18320340 18320499 chrX 18320492 18320706 7 189 0.0 0.0 0.0 7.0 366 chrX 18320340 intron CG6023 - chrX 18320523 intron CG6023 - chrX 18320706 intron CG6023 - chrX_7_18320001 chrX_18320001 CanS-SH 2961 chrX 18427314 18427399 chrX 18427800 18427885 7 486 3.0 5.0 4.0 1.4 571 chrX 18427314 intergenic CG42323 + chrX 18427600 intergenic not near genes chrX 18427885 intergenic not near genes chrX_7_18425001 chrX_18425001 CanS-SH 2962 chrX 18429432 18429469 chrX 18434817 18434855 Transpac 11 5386 8.5 9.5 9.0 1.1 5423 chrX 18429432 intergenic not near genes chrX 18432144 intergenic not near genes chrX 18434855 intergenic not near genes chrX_11_18430001 chrX_18430001 CanS-SH 2963 chrX 18453512 18453563 chrX 18453934 18453985 4 422 4.5 11.5 8.0 0.4 473 chrX 18453512 intron CG32547 - chrX 18453748 intron CG32547 - chrX 18453985 intron CG32547 - chrX_4_18450001 chrX_18450001 CanS-SH 2964 chrX 18489971 18490011 chrX 18490201 18490241 20 230 15.0 0.0 7.5 2.4 270 chrX 18489971 intergenic CG15046 - chrX 18490106 intergenic CG15046 - chrX 18490241 intergenic not near genes chrX_20_18490001 chrX_18490001 CanS-SH 2965 chrX 18524279 18524357 chrX 18524433 18524511 16 154 6.0 4.5 5.2 2.6 232 chrX 18524279 intron Bx + chrX 18524395 intron Bx + chrX 18524511 intron Bx + chrX_16_18520001 chrX_18520001 CanS-SH 2966 chrX 18576079 18576100 chrX 18576232 18576253 6 153 2.0 0.0 1.0 3.0 174 chrX 18576079 intergenic not near genes chrX 18576166 intergenic not near genes chrX 18576253 intergenic not near genes chrX_6_18575001 chrX_18575001 CanS-SH 2967 chrX 18644954 18645007 chrX 18645127 18645180 8 173 10.5 8.5 9.5 0.8 226 chrX 18644954 intron Rip11 - chrX 18645067 intron Rip11 - chrX 18645180 intron Rip11 - chrX_8_18645001 chrX_18645001 CanS-SH 2968 chrX 18671147 18671243 chrX 18671304 18671400 12 157 6.5 5.0 5.8 1.8 253 chrX 18671147 intergenic not near genes chrX 18671274 intergenic not near genes chrX 18671400 intergenic not near genes chrX_12_18670001 chrX_18670001 CanS-SH 2969 chrX 18698778 18698876 chrX 18698970 18699068 13 192 3.0 7.5 5.2 2.1 290 chrX 18698778 intergenic not near genes chrX 18698923 intergenic not near genes chrX 18699068 intergenic not near genes chrX_13_18695001 chrX_18695001 CanS-SH 2970 chrX 18749807 18749891 chrX 18749966 18750050 19 159 6.5 5.5 6.0 2.7 243 chrX 18749807 intergenic not near genes chrX 18749928 intergenic not near genes chrX 18750050 intergenic not near genes chrX_19_18745001 chrX_18745001 CanS-SH 2971 chrX 18754273 18754305 chrX 18758015 18758047 297 6 3742 7.0 7.5 7.2 0.7 3774 chrX 18754273 intergenic not near genes chrX 18756160 intergenic not near genes chrX 18758047 intergenic not near genes chrX_6_18755001 chrX_18755001 CanS-SH 2972 chrX 18896452 18896541 chrX 18896638 18896727 9 186 10.5 2.5 6.5 1.2 275 chrX 18896452 3` UTR CG7349 + chrX 18896590 intergenic CG7349 + chrX 18896727 intergenic CG7349 + chrX_9_18895001 chrX_18895001 CanS-SH 2973 chrX 18906558 18906575 chrX 18906710 18906727 7 152 11.0 0.0 5.5 1.1 169 chrX 18906558 intron CG7378 + chrX 18906642 intron CG7378 + chrX 18906727 intron CG7378 + chrX_7_18905001 chrX_18905001 CanS-SH 2974 chrX 18957008 18957040 chrX 18965745 18965778 roo 14 8738 3.5 7.5 5.5 2.2 8770 chrX 18957008 intron CG43759 + chrX 18961393 intron CG43759 + chrX 18965778 intron CG43759 + chrX_14_18960001 chrX_18960001 CanS-SH 2975 chrX 18988284 18988521 chrX 18988517 18988685 12 199 0.0 0.0 0.0 12.0 401 chrX 18988284 intron CG43759 + chrX 18988484 intron CG43759 + chrX 18988685 intron CG43759 + chrX_12_18985001 chrX_18985001 CanS-SH 2976 chrX 19060349 19060384 chrX 19065208 19065243 Doc 12 4859 13.0 8.0 10.5 1.0 4894 chrX 19060349 intron CG14190 + chrX 19062796 intron CG14190 + chrX 19065243 intron CG14190 + chrX_12_19060001 chrX_19060001 CanS-SH 2977 chrX 19073619 19073684 chrX 19073781 19073846 17 162 6.5 5.0 5.8 2.5 227 chrX 19073619 intergenic not near genes chrX 19073732 intergenic not near genes chrX 19073846 intergenic not near genes chrX_17_19070001 chrX_19070001 CanS-SH 2978 chrX 19080277 19080316 chrX 19080458 19080497 15 181 12.0 10.0 11.0 1.2 220 chrX 19080277 intergenic not near genes chrX 19080387 intergenic not near genes chrX 19080497 intergenic not near genes chrX_15_19080001 chrX_19080001 CanS-SH 2979 chrX 19084018 19084120 chrX 19084213 19084315 17 195 4.5 3.5 4.0 3.4 297 chrX 19084018 intergenic CR45503 + chrX 19084166 intergenic CR45503 + chrX 19084315 intergenic CR45503 + chrX_17_19080001 chrX_19080001 CanS-SH 2980 chrX 19098703 19098755 chrX 19098856 19098908 16 153 0.0 5.5 2.8 4.2 205 chrX 19098703 intergenic not near genes chrX 19098806 intergenic not near genes chrX 19098908 intergenic not near genes chrX_16_19095001 chrX_19095001 CanS-SH 2981 chrX 19101140 19101146 chrX 19101330 19101336 4 190 10.0 0.0 5.0 0.7 196 chrX 19101140 intergenic not near genes chrX 19101238 intergenic not near genes chrX 19101336 intergenic not near genes chrX_4_19100001 chrX_19100001 CanS-SH 2982 chrX 19125611 19125673 chrX 19125770 19125832 7 159 10.5 6.0 8.2 0.8 221 chrX 19125611 exon tgy - chrX 19125722 intron tgy - chrX 19125832 intron tgy - chrX_7_19125001 chrX_19125001 CanS-SH 2983 chrX 19136486 19136520 chrX 19143481 19143515 412 10 6995 9.0 10.0 9.5 1.0 7029 chrX 19136486 intergenic not near genes chrX 19140000 intergenic not near genes chrX 19143515 3` UTR RhoGAP18B - chrX_10_19140001 chrX_19140001 CanS-SH 2984 chrX 19185474 19185514 chrX 19185635 19185685 5 169 1.0 7.0 4.0 1.0 211 chrX 19185474 intron CG33253 + chrX 19185580 intron CG33253 + chrX 19185685 intron CG33253 + chrX_5_19185001 chrX_19185001 CanS-SH 2985 chrX 19249292 19249354 chrX 19249449 19249516 8 162 6.0 4.0 5.0 1.3 224 chrX 19249292 exon Hs3st-B + chrX 19249404 intron Hs3st-B + chrX 19249516 intron Hs3st-B + chrX_8_19245001 chrX_19245001 CanS-SH 2986 chrX 19356932 19357020 chrX 19358448 19358554 NOF 13 1530 6.0 0.0 3.0 3.2 1622 chrX 19356932 intron kek5 + chrX 19357743 intron kek5 + chrX 19358554 intron kek5 + chrX_13_19355001 chrX_19355001 CanS-SH 2987 chrX 19380093 19380133 chrX 19380409 19380449 pogo 11 316 12.0 5.5 8.8 1.1 356 chrX 19380093 intron kek5 + chrX 19380271 intron kek5 + chrX 19380449 intron kek5 + chrX_11_19380001 chrX_19380001 CanS-SH 2988 chrX 19404328 19404367 chrX 19404874 19404913 12 546 11.5 7.5 9.5 1.1 585 chrX 19404328 intron kek5 + chrX 19404620 intron kek5 + chrX 19404913 intron kek5 + chrX_12_19400001 chrX_19400001 CanS-SH 2989 chrX 19437220 19437245 chrX 19444814 19444839 Idefix 6 7594 10.0 6.5 8.2 0.7 7619 chrX 19437220 intron kek5 + chrX 19441030 intron kek5 + chrX 19444839 intron kek5 + chrX_6_19440001 chrX_19440001 CanS-SH 2990 chrX 19460019 19460107 chrX 19460210 19460298 19 191 6.0 4.5 5.2 3.1 279 chrX 19460019 intron kek5 + chrX 19460158 intron kek5 + chrX 19460298 intron kek5 + chrX_19_19460001 chrX_19460001 CanS-SH 2991 chrX 19472061 19472104 chrX 19472705 19472748 jockey 6 644 10.0 6.5 8.2 0.7 687 chrX 19472061 intergenic kek5 + chrX 19472404 intergenic kek5 + chrX 19472748 intergenic not near genes chrX_6_19470001 chrX_19470001 CanS-SH 2992 chrX 19541364 19541446 chrX 19541519 19541601 32 155 5.0 7.0 6.0 4.6 237 chrX 19541364 intron CG32532 - chrX 19541482 intron CG32532 - chrX 19541601 intron CG32532 - chrX_32_19540001 chrX_19540001 CanS-SH 2993 chrX 19542065 19542161 chrX 19542238 19542337 24 173 2.5 2.5 2.5 6.9 272 chrX 19542065 intron CG32532 - chrX 19542201 intron CG32532 - chrX 19542337 intron CG32532 - chrX_24_19540001 chrX_19540001 CanS-SH 2994 chrX 19607014 19607081 chrX 19607176 19607243 16 162 5.5 4.0 4.8 2.8 229 chrX 19607014 intron CG14207 + chrX 19607128 intron CG14207 + chrX 19607243 intron CG14207 + chrX_16_19605001 chrX_19605001 CanS-SH 2995 chrX 19669795 19669876 chrX 19670134 19670216 6 339 5.0 6.5 5.8 0.9 421 chrX 19669795 intron Zw + chrX 19670006 intron Zw + chrX 19670216 intron Zw + chrX_6_19670001 chrX_19670001 CanS-SH 2996 chrX 19710013 19710089 chrX 19711874 19711950 S-element 10 1861 10.0 10.5 10.2 0.9 1937 chrX 19710013 intron meso18E - chrX 19710982 intron meso18E - chrX 19711950 5` UTR meso18E - chrX_10_19710001 chrX_19710001 CanS-SH 2997 chrX 19756058 19756089 chrX 19756219 19756250 9 161 15.0 6.0 10.5 0.8 192 chrX 19756058 intron Pmp70 + chrX 19756154 intron Pmp70 + chrX 19756250 intron Pmp70 + chrX_9_19755001 chrX_19755001 CanS-SH 2998 chrX 19767629 19767700 chrX 19767796 19767867 13 167 10.0 7.5 8.8 1.3 238 chrX 19767629 3` UTR vfl - chrX 19767748 3` UTR vfl - chrX 19767867 3` UTR vfl - chrX_13_19765001 chrX_19765001 CanS-SH 2999 chrX 19797286 19797325 chrX 19804674 19804713 Stalker4 6 7388 16.0 6.5 11.2 0.5 7427 chrX 19797286 intergenic not near genes chrX 19801000 intergenic not near genes chrX 19804713 intergenic not near genes chrX_6_19800001 chrX_19800001 CanS-SH 3000 chrX 19881393 19881467 chrX 19881549 19881623 27 156 6.0 3.5 4.8 4.7 230 chrX 19881393 intron Hers + chrX 19881508 intron Hers + chrX 19881623 intron Hers + chrX_27_19880001 chrX_19880001 CanS-SH 3001 chrX 19883451 19883457 chrX 19883606 19883612 5 155 3.0 3.5 3.2 1.2 161 chrX 19883451 intron Hers + chrX 19883532 intron Hers + chrX 19883612 intron Hers + chrX_5_19880001 chrX_19880001 CanS-SH 3002 chrX 19897343 19897398 chrX 19897495 19897550 14 152 5.5 9.5 7.5 1.6 207 chrX 19897343 intron Hers + chrX 19897446 intron Hers + chrX 19897550 intron Hers + chrX_14_19895001 chrX_19895001 CanS-SH 3003 chrX 19983804 19983847 chrX 19983959 19984002 15 155 7.5 0.0 3.8 3.1 198 chrX 19983804 intergenic not near genes chrX 19983903 intergenic not near genes chrX 19984002 intergenic not near genes chrX_15_19980001 chrX_19980001 CanS-SH 3004 chrX 19984315 19984412 chrX 19984672 19984767 9 357 1.5 5.0 3.2 2.1 452 chrX 19984315 intergenic not near genes chrX 19984541 intergenic not near genes chrX 19984767 intergenic not near genes chrX_9_19980001 chrX_19980001 CanS-SH 3005 chrX 20041468 20041552 chrX 20041623 20041706 24 155 9.0 8.5 8.8 2.4 238 chrX 20041468 intron Dop2R - chrX 20041587 intron Dop2R - chrX 20041706 intron Dop2R - chrX_24_20040001 chrX_20040001 CanS-SH 3006 chrX 20124012 20124099 chrX 20124226 20124313 9 214 6.5 6.0 6.2 1.2 301 chrX 20124012 intron CG34331 + chrX 20124162 intron CG34331 + chrX 20124313 intron CG34331 + chrX_9_20120001 chrX_20120001 CanS-SH 3007 chrX 20132229 20132288 chrX 20132387 20132446 20 158 8.5 7.0 7.8 2.3 217 chrX 20132229 intergenic not near genes chrX 20132338 intergenic not near genes chrX 20132446 intergenic not near genes chrX_20_20130001 chrX_20130001 CanS-SH 3008 chrX 20144274 20144312 chrX 20144429 20144467 12 155 5.0 5.5 5.2 1.9 193 chrX 20144274 intergenic not near genes chrX 20144370 intergenic not near genes chrX 20144467 intergenic not near genes chrX_12_20140001 chrX_20140001 CanS-SH 3009 chrX 20144795 20144823 chrX 20145040 20145068 10 245 13.5 9.0 11.2 0.8 273 chrX 20144795 intergenic not near genes chrX 20144932 intergenic not near genes chrX 20145068 intergenic not near genes chrX_10_20140001 chrX_20140001 CanS-SH 3010 chrX 20263363 20263434 chrX 20263528 20263599 15 165 6.0 2.0 4.0 3.0 236 chrX 20263363 intergenic not near genes chrX 20263481 intergenic not near genes chrX 20263599 intergenic not near genes chrX_15_20260001 chrX_20260001 CanS-SH 3011 chrX 20269861 20269954 chrX 20270018 20270111 16 157 5.0 4.5 4.8 2.8 250 chrX 20269861 intergenic Inx6 - chrX 20269986 intergenic Inx6 - chrX 20270111 intergenic Inx6 - chrX_16_20265001 chrX_20265001 CanS-SH 3012 chrX 20271429 20271470 chrX 20271596 20271637 9 167 11.5 0.0 5.8 1.3 208 chrX 20271429 intergenic not near genes chrX 20271533 intergenic not near genes chrX 20271637 intergenic not near genes chrX_9_20270001 chrX_20270001 CanS-SH 3013 chrX 20279683 20279767 chrX 20279839 20279923 21 156 5.0 8.0 6.5 2.8 240 chrX 20279683 intergenic not near genes chrX 20279803 intergenic not near genes chrX 20279923 intergenic not near genes chrX_21_20275001 chrX_20275001 CanS-SH 3014 chrX 20312853 20312903 chrX 20313006 20313055 14 153 1.5 14.5 8.0 1.6 202 chrX 20312853 intron CG1504 - chrX 20312954 intron CG1504 - chrX 20313055 intron CG1504 - chrX_14_20310001 chrX_20310001 CanS-SH 3015 chrX 20314198 20314250 chrX 20314355 20314407 17 157 6.0 8.5 7.2 2.1 209 chrX 20314198 intron CG1504 - chrX 20314302 intron CG1504 - chrX 20314407 intron CG1504 - chrX_17_20310001 chrX_20310001 CanS-SH 3016 chrX 20320234 20320301 chrX 20320386 20320453 9 152 4.0 0.0 2.0 3.0 219 chrX 20320234 intron CG1504 - chrX 20320344 intron CG1504 - chrX 20320453 intron CG1504 - chrX_9_20320001 chrX_20320001 CanS-SH 3017 chrX 20362090 20362167 chrX 20362505 20362582 12 415 2.5 0.5 1.5 4.8 492 chrX 20362090 intergenic not near genes chrX 20362336 intergenic not near genes chrX 20362582 intergenic not near genes chrX_12_20360001 chrX_20360001 CanS-SH 3018 chrX 20377255 20377278 chrX 20378797 20378820 hobo 7 1542 15.0 7.0 11.0 0.6 1565 chrX 20377255 intergenic not near genes chrX 20378038 intergenic not near genes chrX 20378820 intergenic not near genes chrX_7_20375001 chrX_20375001 CanS-SH 3019 chrX 20415001 20415078 chrX 20415152 20415229 14 151 9.5 0.0 4.8 2.4 228 chrX 20415001 intergenic not near genes chrX 20415115 intergenic not near genes chrX 20415229 intergenic not near genes chrX_14_20415001 chrX_20415001 CanS-SH 3020 chrX 20437317 20437343 chrX 20437967 20437993 7 650 9.5 9.5 9.5 0.7 676 chrX 20437317 intron CG1695 + chrX 20437655 intron CG1695 + chrX 20437993 intron CG1695 + chrX_7_20435001 chrX_20435001 CanS-SH 3021 chrX 20443161 20443195 chrX 20443311 20443346 14 151 10.0 10.5 10.2 1.2 185 chrX 20443161 exon CG1695 + chrX 20443254 intron CG1695 + chrX 20443346 intron CG1695 + chrX_14_20440001 chrX_20440001 CanS-SH 3022 chrX 20456603 20456676 chrX 20456780 20456853 11 177 5.5 8.0 6.8 1.4 250 chrX 20456603 intron CG32506 + chrX 20456728 intron CG32506 + chrX 20456853 intron CG32506 + chrX_11_20455001 chrX_20455001 CanS-SH 3023 chrX 20464175 20464212 chrX 20467670 20467706 20 3494 41.5 38.0 39.8 0.5 3531 chrX 20464175 exon CG32506 + chrX 20465940 3` UTR CG32506 + chrX 20467706 5` UTR GstT3 + chrX_20_20465001 chrX_20465001 CanS-SH 3024 chrX 20467951 20468039 chrX 20468115 20468196 15 161 3.5 6.0 4.8 2.6 245 chrX 20467951 intron GstT3 + chrX 20468074 intron GstT3 + chrX 20468196 intron GstT3 + chrX_15_20465001 chrX_20465001 CanS-SH 3025 chrX 20493923 20493928 chrX 20494159 20494164 4 236 0.0 22.0 11.0 0.3 241 chrX 20493923 intron RhoGAP19D - chrX 20494044 intron RhoGAP19D - chrX 20494164 intron RhoGAP19D - chrX_4_20490001 chrX_20490001 CanS-SH 3026 chrX 20504071 20504098 chrX 20505667 20505694 transib2 11 1596 17.5 8.0 12.8 0.8 1623 chrX 20504071 intron RhoGAP19D - chrX 20504882 intron RhoGAP19D - chrX 20505694 intron RhoGAP19D - chrX_11_20500001 chrX_20500001 CanS-SH 3027 chrX 20528535 20528578 chrX 20528958 20529001 19 423 14.0 6.5 10.2 1.7 466 chrX 20528535 intergenic CG42579 + chrX 20528768 intergenic not near genes chrX 20529001 intergenic not near genes chrX_19_20525001 chrX_20525001 CanS-SH 3028 chrX 20531679 20531755 chrX 20531862 20531929 14 176 0.0 1.5 0.8 7.8 250 chrX 20531679 intergenic not near genes chrX 20531804 intergenic not near genes chrX 20531929 intergenic not near genes chrX_14_20530001 chrX_20530001 CanS-SH 3029 chrX 20546477 20546563 chrX 20546718 20546804 19 241 5.0 6.0 5.5 2.9 327 chrX 20546477 intron RunxB + chrX 20546640 intron RunxB + chrX 20546804 intron RunxB + chrX_19_20545001 chrX_20545001 CanS-SH 3030 chrX 20635358 20635444 chrX 20635599 20635685 18 241 0.0 7.5 3.8 3.8 327 chrX 20635358 intergenic not near genes chrX 20635522 intergenic not near genes chrX 20635685 intergenic not near genes chrX_18_20635001 chrX_20635001 CanS-SH 3031 chrX 20713843 20713893 chrX 20714001 20714051 11 158 7.5 4.0 5.8 1.6 208 chrX 20713843 intergenic not near genes chrX 20713947 intergenic not near genes chrX 20714051 intergenic not near genes chrX_11_20710001 chrX_20710001 CanS-SH 3032 chrX 20741115 20741132 chrX 20741272 20741289 5 157 0.0 7.0 3.5 1.1 174 chrX 20741115 intergenic not near genes chrX 20741202 intergenic not near genes chrX 20741289 intergenic not near genes chrX_5_20740001 chrX_20740001 CanS-SH 3033 chrX 20836677 20836693 chrX 20844354 20844370 roo 6 7677 3.5 4.0 3.8 1.2 7693 chrX 20836677 intron shakB - chrX 20840524 intron shakB - chrX 20844370 intron shakB - chrX_6_20840001 chrX_20840001 CanS-SH 3034 chrX 20897872 20897880 chrX 20898037 20898045 4 165 16.0 0.0 8.0 0.4 173 chrX 20897872 intron shakB - chrX 20897958 intron shakB - chrX 20898045 intron shakB - chrX_4_20895001 chrX_20895001 CanS-SH 3035 chrX 20940662 20940687 chrX 20942206 20942231 hobo 5 1544 12.0 4.0 8.0 0.6 1569 chrX 20940662 intergenic not near genes chrX 20941446 intergenic not near genes chrX 20942231 intergenic not near genes chrX_5_20940001 chrX_20940001 CanS-SH 3036 chrX 20956899 20956947 chrX 20962418 20962466 I-element 6 5519 7.0 3.5 5.2 1.0 5567 chrX 20956899 intergenic not near genes chrX 20959682 intergenic not near genes chrX 20962466 intergenic Ser6 - chrX_6_20955001 chrX_20955001 CanS-SH 3037 chrX 20974126 20974207 chrX 20974385 20974466 11 259 5.0 2.5 3.8 2.3 340 chrX 20974126 intergenic not near genes chrX 20974296 intergenic not near genes chrX 20974466 intergenic not near genes chrX_11_20970001 chrX_20970001 CanS-SH 3038 chrX 20980971 20981024 chrX 20981149 20981202 9 178 7.0 4.0 5.5 1.4 231 chrX 20980971 intergenic not near genes chrX 20981086 intergenic not near genes chrX 20981202 intergenic not near genes chrX_9_20980001 chrX_20980001 CanS-SH 3039 chrX 20991089 20991122 chrX 20991244 20991277 7 155 15.5 1.0 8.2 0.8 188 chrX 20991089 intergenic not near genes chrX 20991183 intergenic not near genes chrX 20991277 intergenic not near genes chrX_7_20990001 chrX_20990001 CanS-SH 3040 chrY 864716 864727 chrY 864867 864878 4 151 12.5 9.5 11.0 0.3 162 chrY 864716 intergenic not near genes chrY 864797 intergenic not near genes chrY 864878 intergenic not near genes chrY_4_860001 chrY_860001 CanS-SH 3041 chrY 975714 975724 chrY 975954 975964 5 240 121.5 96.5 109.0 0.0 250 chrY 975714 intergenic not near genes chrY 975839 intergenic not near genes chrY 975964 intergenic not near genes chrY_5_975001 chrY_975001 CanS-SH 3042 chrY 975726 975809 chrY 975881 975964 14 161 125.0 117.0 121.0 0.1 238 chrY 975726 intergenic not near genes chrY 975845 intergenic not near genes chrY 975964 intergenic not near genes chrY_14_975001 chrY_975001 CanS-SH 3043 chrY 1419835 1419860 chrY 1420164 1420189 5 329 5.5 4.5 5.0 0.8 354 chrY 1419835 intergenic not near genes chrY 1420012 intergenic not near genes chrY 1420189 intergenic not near genes chrY_5_1420001 chrY_1420001 CanS-SH 3044 chrY 1420567 1420641 chrY 1420751 1420792 7 179 0.0 0.5 0.2 5.8 225 chrY 1420567 intergenic not near genes chrY 1420680 intergenic not near genes chrY 1420792 intergenic not near genes chrY_7_1420001 chrY_1420001 CanS-SH 3045 chrY 1420937 1420944 chrY 1421891 1421898 4 954 1.5 0.0 0.8 2.2 961 chrY 1420937 intergenic not near genes chrY 1421418 intergenic not near genes chrY 1421898 intergenic not near genes chrY_4_1420001 chrY_1420001 CanS-SH 3046 chrY 1445411 1445437 chrY 1447416 1447540 5 2045 15.0 6.5 10.8 0.4 2129 chrY 1445411 intergenic not near genes chrY 1446476 intergenic not near genes chrY 1447540 intergenic not near genes chrY_5_1445001 chrY_1445001 CanS-SH 3047 chrY 3561948 3561991 chrY 3562106 3562149 5 158 5.0 2.5 3.8 1.0 201 chrY 3561948 intergenic not near genes chrY 3562048 intergenic not near genes chrY 3562149 intergenic not near genes chrY_5_3560001 chrY_3560001 CanS-SH 3048 chrY 3664543 3664598 chrY 3664721 3664776 4 178 0.0 0.5 0.2 3.3 233 chrY 3664543 exon CG40948 + chrY 3664660 intergenic CG40948 + chrY 3664776 intergenic CG40948 + chrY_4_3660001 chrY_3660001 CanS-SH 3049 chrY 3664921 3664970 chrY 3665100 3665149 6 179 0.5 0.0 0.2 5.0 228 chrY 3664921 intergenic CG40948 + chrY 3665035 intergenic CG40948 + chrY 3665149 intergenic not near genes chrY_6_3665001 chrY_3665001 CanS-SH 3050 chrY 3666357 3666389 chrY 3666585 3666617 4 228 1.5 0.5 1.0 2.0 260 chrY 3666357 intergenic not near genes chrY 3666487 intergenic not near genes chrY 3666617 intergenic not near genes chrY_4_3665001 chrY_3665001 CanS-SH