SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 686915 686945 chr2L 695981 696011 roo 13 9066 6.5 9.5 8.0 1.4 9096 chr2L 686915 intron ds - chr2L 691463 intron ds - chr2L 696011 intron ds - chr2L_13_690001 chr2L_690001 CanS-JC 2 chr2L 1301732 1301780 chr2L 1302297 1302345 gypsy 17 565 6.5 6.0 6.2 2.4 613 chr2L 1301732 intergenic not near genes chr2L 1302038 intergenic not near genes chr2L 1302345 intergenic not near genes chr2L_17_1300001 chr2L_1300001 CanS-JC 3 chr2L 1634746 1634763 chr2L 1634863 1634865 4 113 11.0 9.5 10.2 0.4 119 chr2L 1634746 intergenic not near genes chr2L 1634806 intergenic not near genes chr2L 1634865 intergenic not near genes chr2L_4_1630001 chr2L_1630001 CanS-JC 4 chr2L 1662003 1662034 chr2L 1662114 1662153 4 113 4.0 0.5 2.2 1.2 150 chr2L 1662003 intron chinmo + chr2L 1662078 intron chinmo + chr2L 1662153 intron chinmo + chr2L_4_1660001 chr2L_1660001 CanS-JC 5 chr2L 1678935 1679003 chr2L 1686444 1686494 blood 5 7505 0.0 3.5 1.8 1.8 7559 chr2L 1678935 intron chinmo + chr2L 1682714 intron chinmo + chr2L 1686494 intron chinmo + chr2L_5_1680001 chr2L_1680001 CanS-JC 6 chr2L 1711335 1711386 chr2L 1711685 1711736 mdg3 20 350 3.0 5.0 4.0 4.0 401 chr2L 1711335 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711536 3` UTR frtz - chr2L 1711736 3` UTR frtz - chr2L_20_1710001 chr2L_1710001 CanS-JC 7 chr2L 1721824 1721856 chr2L 1721934 1721966 17 109 0.5 9.5 5.0 2.8 142 chr2L 1721824 intron Rim2 - chr2L 1721895 intron Rim2 - chr2L 1721966 intron Rim2 - chr2L_17_1720001 chr2L_1720001 CanS-JC 8 chr2L 2100375 2100395 chr2L 2109552 2109572 roo 9 9174 6.5 10.0 8.2 1.0 9197 chr2L 2100375 intron dpr3 - chr2L 2104974 intron dpr3 - chr2L 2109572 intron dpr3 - chr2L_9_2100001 chr2L_2100001 CanS-JC 9 chr2L 2317096 2317129 chr2L 2317293 2317326 5 197 30.0 22.0 26.0 0.2 230 chr2L 2317096 intron,intron CG9967 -,eys + chr2L 2317211 intron,intron CG9967 -,eys + chr2L 2317326 intron,intron CG9967 -,eys + chr2L_5_2315001 chr2L_2315001 CanS-JC 10 chr2L 2661189 2661223 chr2L 2663035 2663087 I-element 7 1859 9.0 7.0 8.0 0.8 1898 chr2L 2661189 intergenic not near genes chr2L 2662138 intergenic not near genes chr2L 2663087 intergenic not near genes chr2L_7_2660001 chr2L_2660001 CanS-JC 11 chr2L 2826511 2826545 chr2L 2826629 2826663 14 118 4.0 7.0 5.5 2.2 152 chr2L 2826511 intron Duox - chr2L 2826587 intron Duox - chr2L 2826663 intron Duox - chr2L_14_2825001 chr2L_2825001 CanS-JC 12 chr2L 2873413 2873469 chr2L 2873517 2873573 5 102 0.0 3.0 1.5 2.0 160 chr2L 2873413 intron CG31694 - chr2L 2873493 intron CG31694 - chr2L 2873573 intron CG31694 - chr2L_5_2870001 chr2L_2870001 CanS-JC 13 chr2L 3008883 3008936 chr2L 3009018 3009071 13 135 6.0 6.5 6.2 1.8 188 chr2L 3008883 intron CG17265 + chr2L 3008977 intron CG17265 + chr2L 3009071 intron CG17265 + chr2L_13_3005001 chr2L_3005001 CanS-JC 14 chr2L 3073007 3073044 chr2L 3078236 3078270 copia 13 5229 7.5 6.0 6.8 1.7 5263 chr2L 3073007 intron toc - chr2L 3075638 intron toc - chr2L 3078270 intron toc - chr2L_13_3075001 chr2L_3075001 CanS-JC 15 chr2L 3108839 3108899 chr2L 3108942 3109002 18 102 3.0 2.5 2.8 4.7 163 chr2L 3108839 exon toc - chr2L 3108920 intron toc - chr2L 3109002 intron toc - chr2L_18_3105001 chr2L_3105001 CanS-JC 16 chr2L 3156527 3156564 chr2L 3156650 3156687 13 122 0.0 6.5 3.2 3.1 160 chr2L 3156527 intron Mad - chr2L 3156607 intron Mad - chr2L 3156687 intron Mad - chr2L_13_3155001 chr2L_3155001 CanS-JC 17 chr2L 3192182 3192229 chr2L 3192319 3192366 16 137 2.0 8.5 5.2 2.6 184 chr2L 3192182 exon CG34393 - chr2L 3192274 intron CG34393 - chr2L 3192366 intron CG34393 - chr2L_16_3190001 chr2L_3190001 CanS-JC 18 chr2L 3202722 3202766 chr2L 3210177 3210221 mdg1 17 7455 3.5 7.0 5.2 2.7 7499 chr2L 3202722 intergenic not near genes chr2L 3206472 intergenic not near genes chr2L 3210221 intergenic CR45336 + chr2L_17_3205001 chr2L_3205001 CanS-JC 19 chr2L 3251468 3251522 chr2L 3259059 3259113 springer 8 7591 6.0 7.5 6.8 1.0 7645 chr2L 3251468 intergenic not near genes chr2L 3255290 intergenic not near genes chr2L 3259113 intergenic not near genes chr2L_8_3255001 chr2L_3255001 CanS-JC 20 chr2L 3601061 3601120 chr2L 3601172 3601226 14 107 3.0 3.5 3.2 3.3 165 chr2L 3601061 intergenic not near genes chr2L 3601144 intergenic not near genes chr2L 3601226 intergenic not near genes chr2L_14_3600001 chr2L_3600001 CanS-JC 21 chr2L 3631023 3631078 chr2L 3631177 3631231 23 153 4.0 6.5 5.2 3.7 208 chr2L 3631023 intron for - chr2L 3631127 intron for - chr2L 3631231 intron for - chr2L_23_3630001 chr2L_3630001 CanS-JC 22 chr2L 3632240 3632277 chr2L 3632343 3632380 9 103 0.5 0.5 0.5 6.0 140 chr2L 3632240 intron for - chr2L 3632310 intron for - chr2L 3632380 intron for - chr2L_9_3630001 chr2L_3630001 CanS-JC 23 chr2L 3649769 3649814 chr2L 3654998 3655043 copia 13 5229 0.5 6.0 3.2 3.1 5274 chr2L 3649769 intron for - chr2L 3652406 intron for - chr2L 3655043 intron for - chr2L_13_3650001 chr2L_3650001 CanS-JC 24 chr2L 3668051 3668065 chr2L 3668153 3668167 6 102 0.0 5.5 2.8 1.6 116 chr2L 3668051 intron,3` UTR CG34340 +,Sfp24Ba - chr2L 3668109 intron,3` UTR CG34340 +,Sfp24Ba - chr2L 3668167 intron,exon CG34340 +,Sfp24Ba - chr2L_6_3665001 chr2L_3665001 CanS-JC 25 chr2L 4045529 4045529 chr2L 9499850 9499858 4 5454327 3.5 2.0 2.8 1.1 5454329 chr2L 4045529 intron ed + chr2L 6772694 5` UTR CG11321 - chr2L 9499858 intron CG33298 + chr2L_4_6770001 chr2L_6770001 CanS-JC 26 chr2L 4320017 4320064 chr2L 4320132 4320179 17 115 6.5 4.5 5.5 2.6 162 chr2L 4320017 3` UTR tutl + chr2L 4320098 3` UTR tutl + chr2L 4320179 3` UTR tutl + chr2L_17_4320001 chr2L_4320001 CanS-JC 27 chr2L 4351446 4351499 chr2L 4351548 4351613 17 102 2.5 0.0 1.2 7.7 167 chr2L 4351446 5` UTR CR44700 + chr2L 4351530 intergenic CR44700 + chr2L 4351613 intergenic CR44700 + chr2L_17_4350001 chr2L_4350001 CanS-JC 28 chr2L 4601683 4601728 chr2L 4609150 4609195 mdg1 12 7467 3.5 6.5 5.0 2.0 7512 chr2L 4601683 intron dp - chr2L 4605439 intron dp - chr2L 4609195 intron dp - chr2L_12_4605001 chr2L_4605001 CanS-JC 29 chr2L 4661827 4661842 chr2L 4669433 4669448 opus 4 7606 5.5 7.5 6.5 0.5 7621 chr2L 4661827 intergenic not near genes chr2L 4665638 intergenic not near genes chr2L 4669448 intergenic not near genes chr2L_4_4665001 chr2L_4665001 CanS-JC 30 chr2L 4681598 4681652 chr2L 4681933 4681982 16 334 4.5 3.0 3.8 3.3 384 chr2L 4681598 intergenic not near genes chr2L 4681790 intergenic not near genes chr2L 4681982 intergenic not near genes chr2L_16_4680001 chr2L_4680001 CanS-JC 31 chr2L 4793282 4793315 chr2L 4793603 4793636 5 321 3.5 3.5 3.5 1.1 354 chr2L 4793282 intron CG15630 - chr2L 4793459 intron CG15630 - chr2L 4793636 intron CG15630 - chr2L_5_4790001 chr2L_4790001 CanS-JC 32 chr2L 4819468 4819513 chr2L 4819617 4819662 13 149 3.0 1.0 2.0 4.3 194 chr2L 4819468 intergenic not near genes chr2L 4819565 intergenic not near genes chr2L 4819662 intergenic not near genes chr2L_13_4815001 chr2L_4815001 CanS-JC 33 chr2L 4841050 4841100 chr2L 4841152 4841202 21 102 8.0 7.5 7.8 2.4 152 chr2L 4841050 intron CG12194 + chr2L 4841126 intron CG12194 + chr2L 4841202 3` UTR CG12194 + chr2L_21_4840001 chr2L_4840001 CanS-JC 34 chr2L 4858452 4858477 chr2L 4858566 4858591 8 114 6.0 0.0 3.0 2.0 139 chr2L 4858452 intron pog + chr2L 4858522 intron pog + chr2L 4858591 intron pog + chr2L_8_4855001 chr2L_4855001 CanS-JC 35 chr2L 4862260 4862305 chr2L 4862362 4862407 12 102 8.5 4.5 6.5 1.6 147 chr2L 4862260 intron pog + chr2L 4862334 intron pog + chr2L 4862407 intron pog + chr2L_12_4860001 chr2L_4860001 CanS-JC 36 chr2L 4896421 4896472 chr2L 4896539 4896590 7 118 6.0 5.5 5.8 1.0 169 chr2L 4896421 intron CG3036 + chr2L 4896506 intron CG3036 + chr2L 4896590 intron CG3036 + chr2L_7_4895001 chr2L_4895001 CanS-JC 37 chr2L 4918152 4918187 chr2L 4923251 4923286 jockey 9 5099 5.0 7.0 6.0 1.3 5134 chr2L 4918152 intron hoe1 - chr2L 4920719 intron hoe1 - chr2L 4923286 intron hoe1 - chr2L_9_4920001 chr2L_4920001 CanS-JC 38 chr2L 5092387 5092441 chr2L 5092499 5092554 8 113 4.0 3.5 3.8 1.7 167 chr2L 5092387 intron pgant5 - chr2L 5092470 intron pgant5 - chr2L 5092554 intron pgant5 - chr2L_8_5090001 chr2L_5090001 CanS-JC 39 chr2L 5117271 5117323 chr2L 5117379 5117431 19 108 6.5 5.5 6.0 2.7 160 chr2L 5117271 intron Msp300 + chr2L 5117351 intron Msp300 + chr2L 5117431 intron Msp300 + chr2L_19_5115001 chr2L_5115001 CanS-JC 40 chr2L 5207791 5207837 chr2L 5213775 5213821 12 5984 27.5 26.0 26.8 0.4 6030 chr2L 5207791 exon Cyp28d2 + chr2L 5210806 exon Cyp28d1 + chr2L 5213821 intron CG7742 - chr2L_12_5210001 chr2L_5210001 CanS-JC 41 chr2L 5262505 5262542 chr2L 5262608 5262645 13 103 4.5 11.0 7.8 1.5 140 chr2L 5262505 intron tkv - chr2L 5262575 intron tkv - chr2L 5262645 intron tkv - chr2L_13_5260001 chr2L_5260001 CanS-JC 42 chr2L 5342745 5342771 chr2L 5345151 5345177 Doc 6 2406 5.5 1.5 3.5 1.3 2432 chr2L 5342745 intergenic not near genes chr2L 5343961 intergenic not near genes chr2L 5345177 intergenic not near genes chr2L_6_5340001 chr2L_5340001 CanS-JC 43 chr2L 5378417 5378453 chr2L 5378522 5378558 6 105 1.5 4.0 2.8 1.6 141 chr2L 5378417 intergenic not near genes chr2L 5378488 intergenic not near genes chr2L 5378558 intergenic not near genes chr2L_6_5375001 chr2L_5375001 CanS-JC 44 chr2L 5397992 5398043 chr2L 5398097 5398149 23 101 1.5 6.0 3.8 4.8 157 chr2L 5397992 intergenic not near genes chr2L 5398070 intergenic not near genes chr2L 5398149 intergenic not near genes chr2L_23_5395001 chr2L_5395001 CanS-JC 45 chr2L 5403113 5403159 chr2L 5403232 5403278 4 119 3.0 0.0 1.5 1.6 165 chr2L 5403113 intergenic not near genes chr2L 5403196 intergenic not near genes chr2L 5403278 intergenic not near genes chr2L_4_5400001 chr2L_5400001 CanS-JC 46 chr2L 5475134 5475159 chr2L 5475265 5475290 9 131 2.0 5.5 3.8 1.9 156 chr2L 5475134 intergenic not near genes chr2L 5475212 intergenic not near genes chr2L 5475290 intergenic not near genes chr2L_9_5475001 chr2L_5475001 CanS-JC 47 chr2L 5487991 5488028 chr2L 5488097 5488134 13 106 5.5 3.0 4.2 2.5 143 chr2L 5487991 intergenic not near genes chr2L 5488062 intergenic not near genes chr2L 5488134 intergenic not near genes chr2L_13_5485001 chr2L_5485001 CanS-JC 48 chr2L 5646670 5646677 chr2L 5646776 5646783 7 106 10.5 10.5 10.5 0.6 113 chr2L 5646670 intron CG31646 - chr2L 5646726 intron CG31646 - chr2L 5646783 intron CG31646 - chr2L_7_5645001 chr2L_5645001 CanS-JC 49 chr2L 5672162 5672197 chr2L 5672269 5672304 7 107 5.5 2.0 3.8 1.5 142 chr2L 5672162 intergenic not near genes chr2L 5672233 intergenic not near genes chr2L 5672304 intergenic not near genes chr2L_7_5670001 chr2L_5670001 CanS-JC 50 chr2L 5686350 5686389 chr2L 5686479 5686518 17 129 5.0 1.0 3.0 4.2 168 chr2L 5686350 intergenic not near genes chr2L 5686434 intergenic not near genes chr2L 5686518 intergenic not near genes chr2L_17_5685001 chr2L_5685001 CanS-JC 51 chr2L 5689298 5689338 chr2L 5689507 5689547 12 209 6.0 4.5 5.2 1.9 249 chr2L 5689298 intergenic not near genes chr2L 5689422 intergenic not near genes chr2L 5689547 intergenic not near genes chr2L_12_5685001 chr2L_5685001 CanS-JC 52 chr2L 5695839 5695891 chr2L 5695957 5695992 11 116 3.0 3.0 3.0 2.8 153 chr2L 5695839 intergenic not near genes chr2L 5695916 intergenic not near genes chr2L 5695992 intergenic not near genes chr2L_11_5695001 chr2L_5695001 CanS-JC 53 chr2L 5827691 5827736 chr2L 5836725 5836770 roo 17 9034 4.0 3.0 3.5 3.8 9079 chr2L 5827691 intron TrissinR + chr2L 5832230 intron TrissinR + chr2L 5836770 intron TrissinR + chr2L_17_5830001 chr2L_5830001 CanS-JC 54 chr2L 5839149 5839189 chr2L 5839260 5839304 11 110 4.5 9.0 6.8 1.4 155 chr2L 5839149 intron TrissinR + chr2L 5839226 intron TrissinR + chr2L 5839304 intron TrissinR + chr2L_11_5835001 chr2L_5835001 CanS-JC 55 chr2L 5897575 5897620 chr2L 5897684 5897729 12 109 8.5 12.0 10.2 1.1 154 chr2L 5897575 intergenic not near genes chr2L 5897652 intergenic not near genes chr2L 5897729 intergenic not near genes chr2L_12_5895001 chr2L_5895001 CanS-JC 56 chr2L 5904437 5904473 chr2L 5904543 5904579 18 106 5.5 0.0 2.8 4.7 142 chr2L 5904437 exon CG9021 - chr2L 5904508 intron CG9021 - chr2L 5904579 intron CG9021 - chr2L_18_5900001 chr2L_5900001 CanS-JC 57 chr2L 5926307 5926601 chr2L 5926459 5926706 6 136 6.5 0.0 3.2 1.4 399 chr2L 5926307 intron dsf + chr2L 5926506 intron dsf + chr2L 5926706 intron dsf + chr2L_6_5925001 chr2L_5925001 CanS-JC 58 chr2L 5931294 5931321 chr2L 5931432 5931459 10 138 2.0 5.0 3.5 2.2 165 chr2L 5931294 intron dsf + chr2L 5931376 intron dsf + chr2L 5931459 intron dsf + chr2L_10_5930001 chr2L_5930001 CanS-JC 59 chr2L 5989007 5989060 chr2L 5989109 5989162 14 102 4.5 0.5 2.5 4.0 155 chr2L 5989007 intergenic ifc +,lid - chr2L 5989084 intergenic ifc +,lid - chr2L 5989162 intergenic lid -,ifc + chr2L_14_5985001 chr2L_5985001 CanS-JC 60 chr2L 6015538 6015579 chr2L 6015642 6015683 8 104 4.5 5.5 5.0 1.3 145 chr2L 6015538 intron H2.0 - chr2L 6015610 intron H2.0 - chr2L 6015683 intron H2.0 - chr2L_8_6015001 chr2L_6015001 CanS-JC 61 chr2L 6050416 6050467 chr2L 6050546 6050597 20 129 2.0 3.5 2.8 5.3 181 chr2L 6050416 3` UTR CG12393 + chr2L 6050506 intergenic CG12393 +,CG9135 + chr2L 6050597 intergenic CG12393 +,CG9135 + chr2L_20_6050001 chr2L_6050001 CanS-JC 62 chr2L 6121448 6121506 chr2L 6121575 6121633 26 127 6.0 5.0 5.5 4.0 185 chr2L 6121448 intron stai + chr2L 6121540 intron stai + chr2L 6121633 intron stai + chr2L_26_6120001 chr2L_6120001 CanS-JC 63 chr2L 6130742 6130788 chr2L 6130853 6130898 8 109 3.5 0.0 1.8 2.9 156 chr2L 6130742 intergenic CG42730 -,tectonic -,CG9222 + chr2L 6130820 intergenic CG42730 -,tectonic -,CG9222 + chr2L 6130898 intergenic CG9222 +,CG42730 -,tectonic - chr2L_8_6130001 chr2L_6130001 CanS-JC 64 chr2L 6136527 6136582 chr2L 6136650 6136705 13 123 3.5 3.0 3.2 3.1 178 chr2L 6136527 intergenic not near genes chr2L 6136616 intergenic not near genes chr2L 6136705 intergenic not near genes chr2L_13_6135001 chr2L_6135001 CanS-JC 65 chr2L 6253593 6253635 chr2L 6253695 6253737 8 102 3.5 5.0 4.2 1.5 144 chr2L 6253593 intron Ddr + chr2L 6253665 intron Ddr + chr2L 6253737 intron Ddr + chr2L_8_6250001 chr2L_6250001 CanS-JC 66 chr2L 6255293 6255345 chr2L 6255396 6255448 14 103 3.0 7.0 5.0 2.3 155 chr2L 6255293 intron Ddr + chr2L 6255370 intron Ddr + chr2L 6255448 intron Ddr + chr2L_14_6255001 chr2L_6255001 CanS-JC 67 chr2L 6283919 6283945 chr2L 6284055 6284081 4 136 4.5 0.0 2.2 1.2 162 chr2L 6283919 intron Ddr + chr2L 6284000 intron Ddr + chr2L 6284081 intron Ddr + chr2L_4_6280001 chr2L_6280001 CanS-JC 68 chr2L 6300542 6300580 chr2L 6300654 6300692 7 112 6.0 5.0 5.5 1.1 150 chr2L 6300542 intron Ddr + chr2L 6300617 intron Ddr + chr2L 6300692 intron Ddr + chr2L_7_6300001 chr2L_6300001 CanS-JC 69 chr2L 6349058 6349074 chr2L 6349162 6349178 12 104 2.5 6.5 4.5 2.2 120 chr2L 6349058 intergenic CG9498 - chr2L 6349118 intergenic CG9498 - chr2L 6349178 intergenic CG9498 - chr2L_12_6345001 chr2L_6345001 CanS-JC 70 chr2L 6358215 6358260 chr2L 6358601 6358646 6 386 0.0 4.5 2.2 1.9 431 chr2L 6358215 intron CG9500 - chr2L 6358430 3` UTR CR44777 - chr2L 6358646 3` UTR CR44777 - chr2L_6_6355001 chr2L_6355001 CanS-JC 71 chr2L 6363130 6363181 chr2L 6366076 6366129 Burdock 11 2946 5.5 5.0 5.2 1.8 2999 chr2L 6363130 intergenic not near genes chr2L 6364630 intergenic not near genes chr2L 6366129 intergenic not near genes chr2L_11_6360001 chr2L_6360001 CanS-JC 72 chr2L 6426833 6426884 chr2L 6445119 6445170 roo 19 18286 8.5 4.5 6.5 2.5 18337 chr2L 6426833 3` UTR CG9527 - chr2L 6436002 intron CG9527 - chr2L 6445170 exon CG9527 - chr2L_19_6435001 chr2L_6435001 CanS-JC 73 chr2L 6483599 6483774 chr2L 6483735 6483898 7 130 0.0 0.0 0.0 7.0 299 chr2L 6483599 exon DLP + chr2L 6483748 exon DLP + chr2L 6483898 exon DLP + chr2L_7_6480001 chr2L_6480001 CanS-JC 74 chr2L 6544362 6544385 chr2L 6544480 6544503 10 118 0.0 5.0 2.5 2.9 141 chr2L 6544362 intron eya - chr2L 6544432 intron eya - chr2L 6544503 intron eya - chr2L_10_6540001 chr2L_6540001 CanS-JC 75 chr2L 6564821 6564881 chr2L 6564940 6564999 13 119 0.5 4.5 2.5 3.7 178 chr2L 6564821 3` UTR CG13766 - chr2L 6564910 3` UTR CG13766 - chr2L 6564999 3` UTR CG13766 - chr2L_13_6560001 chr2L_6560001 CanS-JC 76 chr2L 6590075 6590118 chr2L 6590179 6590222 18 103 6.0 1.5 3.8 3.8 147 chr2L 6590075 intron CG11319 - chr2L 6590148 intron CG11319 - chr2L 6590222 intron CG11319 - chr2L_18_6590001 chr2L_6590001 CanS-JC 77 chr2L 6600419 6600446 chr2L 6600525 6600552 8 106 8.0 1.5 4.8 1.4 133 chr2L 6600419 intron CG11319 - chr2L 6600486 intron CG11319 - chr2L 6600552 intron CG11319 - chr2L_8_6600001 chr2L_6600001 CanS-JC 78 chr2L 6771970 6772021 chr2L 6772076 6772134 11 109 2.5 5.0 3.8 2.3 164 chr2L 6771970 intron CG11321 - chr2L 6772052 intron CG11321 - chr2L 6772134 intron CG11321 - chr2L_11_6770001 chr2L_6770001 CanS-JC 79 chr2L 6799512 6799567 chr2L 6799626 6799681 10 114 1.0 5.0 3.0 2.5 169 chr2L 6799512 5` UTR CR43610 + chr2L 6799596 5` UTR CR43610 + chr2L 6799681 intergenic CR43610 +,CG17376 - chr2L_10_6795001 chr2L_6795001 CanS-JC 80 chr2L 6818102 6818141 chr2L 6818217 6818254 9 114 1.0 1.5 1.2 4.1 152 chr2L 6818102 intergenic not near genes chr2L 6818178 intergenic not near genes chr2L 6818254 intergenic not near genes chr2L_9_6815001 chr2L_6815001 CanS-JC 81 chr2L 6876752 6876758 chr2L 6882969 6882975 diver 6 6217 12.0 8.0 10.0 0.5 6223 chr2L 6876752 intron Nlg2 + chr2L 6879864 intron Nlg2 + chr2L 6882975 intron Nlg2 + chr2L_6_6875001 chr2L_6875001 CanS-JC 82 chr2L 6876763 6876809 chr2L 6882968 6883026 diver 14 6216 2.5 7.5 5.0 2.3 6263 chr2L 6876763 intron Nlg2 + chr2L 6879894 intron Nlg2 + chr2L 6883026 intron Nlg2 + chr2L_14_6875001 chr2L_6875001 CanS-JC 83 chr2L 6887475 6887525 chr2L 6887651 6887703 6 177 5.5 0.0 2.8 1.6 228 chr2L 6887475 intron Nlg2 + chr2L 6887589 intron Nlg2 + chr2L 6887703 intron Nlg2 + chr2L_6_6885001 chr2L_6885001 CanS-JC 84 chr2L 7005220 7005254 chr2L 7005342 7005376 9 122 1.5 3.0 2.2 2.8 156 chr2L 7005220 intron uif - chr2L 7005298 intron uif - chr2L 7005376 intron uif - chr2L_9_7005001 chr2L_7005001 CanS-JC 85 chr2L 7019540 7019585 chr2L 7019642 7019687 13 101 3.0 4.0 3.5 2.9 147 chr2L 7019540 intron ade3 - chr2L 7019614 intron ade3 - chr2L 7019687 intron ade3 - chr2L_13_7015001 chr2L_7015001 CanS-JC 86 chr2L 7043485 7043518 chr2L 7043598 7043631 6 113 6.0 4.5 5.2 1.0 146 chr2L 7043485 intron milt + chr2L 7043558 intron milt + chr2L 7043631 intron milt + chr2L_6_7040001 chr2L_7040001 CanS-JC 87 chr2L 7125763 7125802 chr2L 7125905 7125944 9 142 2.5 4.5 3.5 2.0 181 chr2L 7125763 intron Pvf3 - chr2L 7125854 intron Pvf3 - chr2L 7125944 intron Pvf3 - chr2L_9_7125001 chr2L_7125001 CanS-JC 88 chr2L 7126835 7126869 chr2L 7126940 7126974 11 105 2.0 0.0 1.0 5.5 139 chr2L 7126835 intron Pvf3 - chr2L 7126904 intron Pvf3 - chr2L 7126974 intron Pvf3 - chr2L_11_7125001 chr2L_7125001 CanS-JC 89 chr2L 7254525 7254543 chr2L 7254629 7254647 4 104 0.0 3.5 1.8 1.4 122 chr2L 7254525 intergenic not near genes chr2L 7254586 intergenic not near genes chr2L 7254647 intergenic not near genes chr2L_4_7250001 chr2L_7250001 CanS-JC 90 chr2L 7263643 7263684 chr2L 7263773 7263814 11 130 7.5 8.0 7.8 1.2 171 chr2L 7263643 intron Wnt4 - chr2L 7263728 intron Wnt4 - chr2L 7263814 intron Wnt4 - chr2L_11_7260001 chr2L_7260001 CanS-JC 91 chr2L 7325890 7325941 chr2L 7326001 7326052 13 111 4.5 7.5 6.0 1.9 162 chr2L 7325890 intergenic not near genes chr2L 7325971 intergenic not near genes chr2L 7326052 intergenic not near genes chr2L_13_7325001 chr2L_7325001 CanS-JC 92 chr2L 7343306 7343354 chr2L 7350439 7350496 roo 24 7141 3.5 1.5 2.5 6.9 7190 chr2L 7343306 intron Wnt6 + chr2L 7346901 intron Wnt6 + chr2L 7350496 intron Wnt6 + chr2L_24_7345001 chr2L_7345001 CanS-JC 93 chr2L 7350880 7350909 chr2L 7350983 7351012 5 103 3.0 5.5 4.2 1.0 132 chr2L 7350880 intron Wnt6 + chr2L 7350946 intron Wnt6 + chr2L 7351012 intron Wnt6 + chr2L_5_7350001 chr2L_7350001 CanS-JC 94 chr2L 7410603 7410648 chr2L 7410865 7410910 11 262 5.5 6.5 6.0 1.6 307 chr2L 7410603 intergenic CG15818 + chr2L 7410756 intergenic CG15818 + chr2L 7410910 5` UTR CG15818 + chr2L_11_7410001 chr2L_7410001 CanS-JC 95 chr2L 7432204 7432247 chr2L 7432312 7432355 22 108 1.5 7.0 4.2 4.2 151 chr2L 7432204 intron CG5958 - chr2L 7432280 intron CG5958 - chr2L 7432355 intron CG5958 - chr2L_22_7430001 chr2L_7430001 CanS-JC 96 chr2L 7502709 7502762 chr2L 7502811 7502864 15 102 3.5 7.5 5.5 2.3 155 chr2L 7502709 intron RapGAP1 - chr2L 7502786 intron RapGAP1 - chr2L 7502864 intron RapGAP1 - chr2L_15_7500001 chr2L_7500001 CanS-JC 97 chr2L 7555198 7555230 chr2L 7555301 7555333 9 103 0.0 5.0 2.5 2.6 135 chr2L 7555198 intron RapGAP1 - chr2L 7555266 intron RapGAP1 - chr2L 7555333 intron RapGAP1 - chr2L_9_7555001 chr2L_7555001 CanS-JC 98 chr2L 7567472 7567507 chr2L 7567575 7567610 13 103 5.0 6.0 5.5 2.0 138 chr2L 7567472 intron RapGAP1 - chr2L 7567541 intron RapGAP1 - chr2L 7567610 intron RapGAP1 - chr2L_13_7565001 chr2L_7565001 CanS-JC 99 chr2L 7603067 7603118 chr2L 7603173 7603223 11 106 2.5 3.5 3.0 2.8 156 chr2L 7603067 intergenic not near genes chr2L 7603145 intergenic not near genes chr2L 7603223 intergenic not near genes chr2L_11_7600001 chr2L_7600001 CanS-JC 100 chr2L 7640403 7640415 chr2L 7640518 7640530 5 115 10.5 1.0 5.8 0.7 127 chr2L 7640403 intergenic not near genes chr2L 7640466 intergenic not near genes chr2L 7640530 intergenic not near genes chr2L_5_7640001 chr2L_7640001 CanS-JC 101 chr2L 7717844 7717890 chr2L 7717963 7718009 13 119 5.0 6.0 5.5 2.0 165 chr2L 7717844 intron CG13793 - chr2L 7717926 exon CG13793 - chr2L 7718009 intron CG13793 - chr2L_13_7715001 chr2L_7715001 CanS-JC 102 chr2L 7770585 7770645 chr2L 7770818 7770878 10 233 0.0 0.0 0.0 10.0 293 chr2L 7770585 intron CG7191 + chr2L 7770732 intron CG7191 + chr2L 7770878 intron CG7191 + chr2L_10_7770001 chr2L_7770001 CanS-JC 103 chr2L 7850965 7850979 chr2L 7851104 7851118 5 139 3.0 3.0 3.0 1.2 153 chr2L 7850965 intron CG14535 - chr2L 7851042 intron CG14535 - chr2L 7851118 intron CG14535 - chr2L_5_7850001 chr2L_7850001 CanS-JC 104 chr2L 7863033 7863067 chr2L 7863812 7863845 13 778 4.0 4.0 4.0 2.6 812 chr2L 7863033 intergenic not near genes chr2L 7863439 intergenic not near genes chr2L 7863845 intergenic not near genes chr2L_13_7860001 chr2L_7860001 CanS-JC 105 chr2L 7867571 7867598 chr2L 7867691 7867718 8 120 5.0 2.5 3.8 1.7 147 chr2L 7867571 intron Proc - chr2L 7867644 intron Proc - chr2L 7867718 intron Proc - chr2L_8_7865001 chr2L_7865001 CanS-JC 106 chr2L 7941176 7941191 chr2L 7941281 7941296 7 105 9.5 8.5 9.0 0.7 120 chr2L 7941176 intron Snoo - chr2L 7941236 intron Snoo - chr2L 7941296 intron Snoo - chr2L_7_7940001 chr2L_7940001 CanS-JC 107 chr2L 7959016 7959064 chr2L 7960453 7960503 pogo 8 1437 5.5 0.0 2.8 2.1 1487 chr2L 7959016 intron Snoo - chr2L 7959760 intron Snoo - chr2L 7960503 intron Snoo - chr2L_8_7955001 chr2L_7955001 CanS-JC 108 chr2L 7994379 7994435 chr2L 7994648 7994704 25 269 4.0 4.0 4.0 5.0 325 chr2L 7994379 intergenic CG7227 -,pes -,CR44996 + chr2L 7994542 3` UTR CG7227 - chr2L 7994704 3` UTR CG7227 - chr2L_25_7990001 chr2L_7990001 CanS-JC 109 chr2L 8003008 8003057 chr2L 8003116 8003165 9 108 2.0 2.0 2.0 3.0 157 chr2L 8003008 intron Wwox - chr2L 8003086 intron Wwox - chr2L 8003165 intron Wwox - chr2L_9_8000001 chr2L_8000001 CanS-JC 110 chr2L 8013595 8013601 chr2L 8018825 8018831 copia 6 5230 10.5 0.0 5.2 1.0 5236 chr2L 8013595 intron Tg + chr2L 8016213 intron Tg + chr2L 8018831 intron Tg + chr2L_6_8015001 chr2L_8015001 CanS-JC 111 chr2L 8018816 8018836 chr2L 8023626 8023646 Doc 4 4810 0.0 10.5 5.2 0.6 4830 chr2L 8018816 intron Tg + chr2L 8021231 intron Tg + chr2L 8023646 intron Tg + chr2L_4_8020001 chr2L_8020001 CanS-JC 112 chr2L 8089658 8089691 chr2L 8105692 8105725 6 16034 27.0 29.0 28.0 0.2 16067 chr2L 8089658 5` UTR Bsg + chr2L 8097692 intron Bsg + chr2L 8105725 exon Bsg + chr2L_6_8095001 chr2L_8095001 CanS-JC 113 chr2L 8105734 8105777 chr2L 8106843 8106886 13 1109 25.5 23.0 24.2 0.5 1152 chr2L 8105734 exon Bsg + chr2L 8106310 intron Bsg + chr2L 8106886 exon Bsg + chr2L_13_8105001 chr2L_8105001 CanS-JC 114 chr2L 8106933 8107137 chr2L 8107077 8107280 16 143 27.0 24.5 25.8 0.6 347 chr2L 8106933 exon Bsg + chr2L 8107106 exon Bsg + chr2L 8107280 exon Bsg + chr2L_16_8105001 chr2L_8105001 CanS-JC 115 chr2L 8107365 8107416 chr2L 8107753 8107804 5 388 16.5 18.0 17.2 0.3 439 chr2L 8107365 exon Bsg + chr2L 8107584 intron Bsg + chr2L 8107804 exon Bsg + chr2L_5_8105001 chr2L_8105001 CanS-JC 116 chr2L 8167121 8167175 chr2L 8167238 8167292 15 117 5.5 4.0 4.8 2.6 171 chr2L 8167121 intron Piezo + chr2L 8167206 intron Piezo + chr2L 8167292 intron Piezo + chr2L_15_8165001 chr2L_8165001 CanS-JC 117 chr2L 8244706 8244743 chr2L 8244854 8244891 9 148 4.0 6.0 5.0 1.5 185 chr2L 8244706 intron CG8086 - chr2L 8244798 intron CG8086 - chr2L 8244891 intron CG8086 - chr2L_9_8240001 chr2L_8240001 CanS-JC 118 chr2L 8286271 8286327 chr2L 8286384 8286440 9 111 7.5 8.5 8.0 1.0 169 chr2L 8286271 intron Btk29A - chr2L 8286356 intron Btk29A - chr2L 8286440 intron Btk29A - chr2L_9_8285001 chr2L_8285001 CanS-JC 119 chr2L 8288647 8288704 chr2L 8288768 8288823 24 120 2.5 4.0 3.2 5.7 176 chr2L 8288647 intron Btk29A - chr2L 8288735 intron Btk29A - chr2L 8288823 intron Btk29A - chr2L_24_8285001 chr2L_8285001 CanS-JC 120 chr2L 8336931 8336963 chr2L 8337036 8337068 8 105 0.0 6.0 3.0 2.0 137 chr2L 8336931 intergenic not near genes chr2L 8337000 intergenic not near genes chr2L 8337068 intergenic not near genes chr2L_8_8335001 chr2L_8335001 CanS-JC 121 chr2L 8452403 8452446 chr2L 8461600 8461643 roo 11 9197 6.5 5.0 5.8 1.6 9240 chr2L 8452403 intron fu12 - chr2L 8457023 intron fu12 - chr2L 8461643 intron fu12 - chr2L_11_8455001 chr2L_8455001 CanS-JC 122 chr2L 8588529 8588570 chr2L 8588646 8588687 14 117 5.5 5.5 5.5 2.2 158 chr2L 8588529 intron Sema-1a + chr2L 8588608 intron Sema-1a + chr2L 8588687 intron Sema-1a + chr2L_14_8585001 chr2L_8585001 CanS-JC 123 chr2L 8612829 8612869 chr2L 8612932 8612972 18 103 3.5 5.5 4.5 3.3 143 chr2L 8612829 intron Sema-1a + chr2L 8612900 intron Sema-1a + chr2L 8612972 intron Sema-1a + chr2L_18_8610001 chr2L_8610001 CanS-JC 124 chr2L 8661542 8661584 chr2L 8662114 8662156 9 572 39.0 18.5 28.8 0.3 614 chr2L 8661542 intron Sema-1a + chr2L 8661849 intron Sema-1a + chr2L 8662156 intron Sema-1a + chr2L_9_8660001 chr2L_8660001 CanS-JC 125 chr2L 8723093 8723140 chr2L 8731496 8731543 Tirant 14 8403 4.5 5.5 5.0 2.3 8450 chr2L 8723093 intron raw - chr2L 8727318 intron raw - chr2L 8731543 intron raw - chr2L_14_8725001 chr2L_8725001 CanS-JC 126 chr2L 8784680 8784724 chr2L 8784817 8784861 14 136 2.5 5.0 3.8 2.9 181 chr2L 8784680 intergenic not near genes chr2L 8784770 intergenic not near genes chr2L 8784861 intergenic not near genes chr2L_14_8780001 chr2L_8780001 CanS-JC 127 chr2L 8786539 8786578 chr2L 8786652 8786691 16 113 0.0 6.0 3.0 4.0 152 chr2L 8786539 intergenic not near genes chr2L 8786615 intergenic not near genes chr2L 8786691 intergenic not near genes chr2L_16_8785001 chr2L_8785001 CanS-JC 128 chr2L 8788736 8788779 chr2L 8788853 8788896 15 117 1.0 2.5 1.8 5.4 160 chr2L 8788736 intergenic not near genes chr2L 8788816 intergenic not near genes chr2L 8788896 intergenic not near genes chr2L_15_8785001 chr2L_8785001 CanS-JC 129 chr2L 8799776 8799829 chr2L 8799918 8799971 20 142 3.0 4.5 3.8 4.2 195 chr2L 8799776 intergenic not near genes chr2L 8799874 intergenic not near genes chr2L 8799971 intergenic not near genes chr2L_20_8795001 chr2L_8795001 CanS-JC 130 chr2L 8877649 8877666 chr2L 8877753 8877770 13 104 5.5 5.0 5.2 2.1 121 chr2L 8877649 intergenic not near genes chr2L 8877710 intergenic not near genes chr2L 8877770 intergenic not near genes chr2L_13_8875001 chr2L_8875001 CanS-JC 131 chr2L 8976224 8976253 chr2L 8976329 8976369 10 116 0.0 2.5 1.2 4.5 145 chr2L 8976224 intergenic not near genes chr2L 8976296 intergenic not near genes chr2L 8976369 intergenic not near genes chr2L_10_8975001 chr2L_8975001 CanS-JC 132 chr2L 9000257 9000308 chr2L 9007793 9007844 roo 9 7536 6.0 0.0 3.0 2.2 7587 chr2L 9000257 intergenic Try29F + chr2L 9004050 intergenic not near genes chr2L 9007844 intergenic not near genes chr2L_9_9000001 chr2L_9000001 CanS-JC 133 chr2L 9069658 9069677 chr2L 9069775 9069794 5 117 0.0 3.0 1.5 2.0 136 chr2L 9069658 intron CG31708 - chr2L 9069726 intron CG31708 - chr2L 9069794 intron CG31708 - chr2L_5_9065001 chr2L_9065001 CanS-JC 134 chr2L 9073264 9073297 chr2L 9073376 9073409 15 112 2.5 10.0 6.2 2.1 145 chr2L 9073264 intergenic not near genes chr2L 9073336 intergenic not near genes chr2L 9073409 intergenic not near genes chr2L_15_9070001 chr2L_9070001 CanS-JC 135 chr2L 9114073 9114122 chr2L 9114178 9114227 15 103 3.5 9.0 6.2 2.1 154 chr2L 9114073 intergenic not near genes chr2L 9114150 intergenic not near genes chr2L 9114227 intergenic not near genes chr2L_15_9110001 chr2L_9110001 CanS-JC 136 chr2L 9119998 9120029 chr2L 9120102 9120133 5 104 2.0 3.5 2.8 1.3 135 chr2L 9119998 5` UTR CR44617 + chr2L 9120066 intergenic CR44617 + chr2L 9120133 intergenic CR44617 + chr2L_5_9120001 chr2L_9120001 CanS-JC 137 chr2L 9152121 9152160 chr2L 9152267 9152313 10 150 0.0 3.0 1.5 4.0 192 chr2L 9152121 intron CG32982 + chr2L 9152217 intron CG32982 + chr2L 9152313 intron CG32982 + chr2L_10_9150001 chr2L_9150001 CanS-JC 138 chr2L 9154872 9154899 chr2L 9154981 9155008 5 109 0.0 5.0 2.5 1.4 136 chr2L 9154872 intron CG32982 + chr2L 9154940 intron CG32982 + chr2L 9155008 intron CG32982 + chr2L_5_9150001 chr2L_9150001 CanS-JC 139 chr2L 9158772 9158791 chr2L 9158895 9158914 8 123 7.0 0.0 3.5 1.8 142 chr2L 9158772 intron CG32982 + chr2L 9158843 intron CG32982 + chr2L 9158914 intron CG32982 + chr2L_8_9155001 chr2L_9155001 CanS-JC 140 chr2L 9173059 9173093 chr2L 9173162 9173196 11 103 4.5 9.5 7.0 1.4 137 chr2L 9173059 intron tai + chr2L 9173128 intron tai + chr2L 9173196 intron tai + chr2L_11_9170001 chr2L_9170001 CanS-JC 141 chr2L 9190925 9190958 chr2L 9191032 9191065 6 107 0.0 5.5 2.8 1.6 140 chr2L 9190925 intron tai + chr2L 9190995 intron tai + chr2L 9191065 intron tai + chr2L_6_9190001 chr2L_9190001 CanS-JC 142 chr2L 9195851 9195878 chr2L 9195960 9195987 10 109 2.0 6.0 4.0 2.0 136 chr2L 9195851 intron tai + chr2L 9195919 intron tai + chr2L 9195987 intron tai + chr2L_10_9195001 chr2L_9195001 CanS-JC 143 chr2L 9264324 9264367 chr2L 9264450 9264493 15 125 1.5 4.0 2.8 3.9 169 chr2L 9264324 intron Ggamma30A + chr2L 9264408 intron Ggamma30A + chr2L 9264493 intron Ggamma30A + chr2L_15_9260001 chr2L_9260001 CanS-JC 144 chr2L 9270718 9270765 chr2L 9270839 9270886 12 121 4.0 2.0 3.0 3.0 168 chr2L 9270718 intron Ggamma30A + chr2L 9270802 intron Ggamma30A + chr2L 9270886 intron Ggamma30A + chr2L_12_9270001 chr2L_9270001 CanS-JC 145 chr2L 9274170 9274222 chr2L 9274278 9274318 9 107 6.5 6.5 6.5 1.2 148 chr2L 9274170 intron Ggamma30A + chr2L 9274244 intron Ggamma30A + chr2L 9274318 intron Ggamma30A + chr2L_9_9270001 chr2L_9270001 CanS-JC 146 chr2L 9279973 9280006 chr2L 9280092 9280126 4 120 6.5 2.5 4.5 0.7 153 chr2L 9279973 intron Ggamma30A + chr2L 9280050 intron Ggamma30A + chr2L 9280126 intron Ggamma30A + chr2L_4_9280001 chr2L_9280001 CanS-JC 147 chr2L 9285014 9285045 chr2L 9285116 9285147 13 102 5.0 8.0 6.5 1.7 133 chr2L 9285014 intron Ggamma30A + chr2L 9285080 intron Ggamma30A + chr2L 9285147 intron Ggamma30A + chr2L_13_9285001 chr2L_9285001 CanS-JC 148 chr2L 9287296 9287353 chr2L 9287419 9287476 16 123 4.0 1.0 2.5 4.6 180 chr2L 9287296 intron Ggamma30A + chr2L 9287386 intron Ggamma30A + chr2L 9287476 intron Ggamma30A + chr2L_16_9285001 chr2L_9285001 CanS-JC 149 chr2L 9297355 9297403 chr2L 9297458 9297506 14 103 4.5 4.0 4.2 2.7 151 chr2L 9297355 3` UTR Ggamma30A + chr2L 9297430 3` UTR Ggamma30A + chr2L 9297506 3` UTR Ggamma30A + chr2L_14_9295001 chr2L_9295001 CanS-JC 150 chr2L 9300665 9300676 chr2L 9300787 9300798 6 122 5.5 1.5 3.5 1.3 133 chr2L 9300665 3` UTR Ggamma30A + chr2L 9300732 3` UTR Ggamma30A + chr2L 9300798 3` UTR Ggamma30A + chr2L_6_9300001 chr2L_9300001 CanS-JC 151 chr2L 9304330 9304504 chr2L 9304440 9304609 14 106 2.0 2.0 2.0 4.7 279 chr2L 9304330 intergenic CR42844 - chr2L 9304470 3` UTR CR42844 - chr2L 9304609 3` UTR CR42844 - chr2L_14_9300001 chr2L_9300001 CanS-JC 152 chr2L 9335078 9335103 chr2L 9335224 9335249 7 146 1.0 4.0 2.5 2.0 171 chr2L 9335078 intron Eaat1 + chr2L 9335164 intron Eaat1 + chr2L 9335249 intron Eaat1 + chr2L_7_9335001 chr2L_9335001 CanS-JC 153 chr2L 9385095 9385148 chr2L 9385211 9385264 12 116 3.0 4.0 3.5 2.7 169 chr2L 9385095 intron Shawl - chr2L 9385180 intron Shawl - chr2L 9385264 intron Shawl - chr2L_12_9385001 chr2L_9385001 CanS-JC 154 chr2L 9387223 9387276 chr2L 9387347 9387400 11 124 3.0 2.0 2.5 3.1 177 chr2L 9387223 intron Shawl - chr2L 9387312 intron Shawl - chr2L 9387400 intron,5` UTR Shawl -,Aldh + chr2L_11_9385001 chr2L_9385001 CanS-JC 155 chr2L 9391515 9391564 chr2L 9391708 9391757 16 193 4.0 5.0 4.5 2.9 242 chr2L 9391515 intron,3` UTR Shawl -,Aldh + chr2L 9391636 intron Shawl - chr2L 9391757 intron Shawl - chr2L_16_9390001 chr2L_9390001 CanS-JC 156 chr2L 9393487 9393525 chr2L 9396479 9396518 jockey 15 2993 11.5 6.0 8.8 1.5 3031 chr2L 9393487 intron Shawl - chr2L 9395002 intron Shawl - chr2L 9396518 intron Shawl - chr2L_15_9395001 chr2L_9395001 CanS-JC 157 chr2L 9443043 9443093 chr2L 9443175 9443233 14 139 4.5 5.5 5.0 2.3 190 chr2L 9443043 intron numb + chr2L 9443138 intron numb + chr2L 9443233 intron numb + chr2L_14_9440001 chr2L_9440001 CanS-JC 158 chr2L 9451029 9451066 chr2L 9451158 9451186 6 126 0.0 2.5 1.2 2.7 157 chr2L 9451029 intron numb + chr2L 9451108 intron numb + chr2L 9451186 intron numb + chr2L_6_9450001 chr2L_9450001 CanS-JC 159 chr2L 9454951 9455003 chr2L 9455079 9455133 10 129 5.5 3.0 4.2 1.9 182 chr2L 9454951 intron numb + chr2L 9455042 intron numb + chr2L 9455133 intron numb + chr2L_10_9455001 chr2L_9455001 CanS-JC 160 chr2L 9456906 9456941 chr2L 9457013 9457048 12 107 3.0 4.5 3.8 2.5 142 chr2L 9456906 intron numb + chr2L 9456977 intron numb + chr2L 9457048 intron numb + chr2L_12_9455001 chr2L_9455001 CanS-JC 161 chr2L 9527296 9527307 chr2L 9527404 9527415 5 108 2.0 3.5 2.8 1.3 119 chr2L 9527296 intron Oatp30B + chr2L 9527356 intron Oatp30B + chr2L 9527415 intron Oatp30B + chr2L_5_9525001 chr2L_9525001 CanS-JC 162 chr2L 9672041 9672059 chr2L 9672152 9672170 4 111 8.0 0.0 4.0 0.8 129 chr2L 9672041 intergenic not near genes chr2L 9672106 intergenic not near genes chr2L 9672170 intergenic not near genes chr2L_4_9670001 chr2L_9670001 CanS-JC 163 chr2L 9673827 9673859 chr2L 9674006 9674038 8 179 1.5 1.0 1.2 3.6 211 chr2L 9673827 intergenic not near genes chr2L 9673932 intergenic not near genes chr2L 9674038 intergenic not near genes chr2L_8_9670001 chr2L_9670001 CanS-JC 164 chr2L 9719750 9719768 chr2L 9719858 9719877 4 108 0.5 0.5 0.5 2.7 127 chr2L 9719750 intron Nckx30C - chr2L 9719814 intron Nckx30C - chr2L 9719877 intron Nckx30C - chr2L_4_9715001 chr2L_9715001 CanS-JC 165 chr2L 9730953 9731004 chr2L 9731062 9731113 11 109 3.0 2.5 2.8 2.9 160 chr2L 9730953 intron Nckx30C - chr2L 9731033 intron Nckx30C - chr2L 9731113 intron Nckx30C - chr2L_11_9730001 chr2L_9730001 CanS-JC 166 chr2L 9748820 9748866 chr2L 9748962 9749009 15 143 3.5 5.0 4.2 2.9 189 chr2L 9748820 exon Cyp4e3 - chr2L 9748914 exon Cyp4e3 - chr2L 9749009 exon Cyp4e3 - chr2L_15_9745001 chr2L_9745001 CanS-JC 167 chr2L 9862339 9862358 chr2L 9862473 9862492 5 134 0.0 7.5 3.8 1.0 153 chr2L 9862339 intron nAChRalpha6 - chr2L 9862416 intron nAChRalpha6 - chr2L 9862492 intron nAChRalpha6 - chr2L_5_9860001 chr2L_9860001 CanS-JC 168 chr2L 9880986 9881030 chr2L 9881090 9881134 17 104 7.5 3.5 5.5 2.6 148 chr2L 9880986 intron nAChRalpha6 - chr2L 9881060 intron nAChRalpha6 - chr2L 9881134 intron nAChRalpha6 - chr2L_17_9880001 chr2L_9880001 CanS-JC 169 chr2L 9973714 9973758 chr2L 9980859 9980900 HMS-Beagle 13 7143 4.5 3.5 4.0 2.6 7186 chr2L 9973714 intergenic not near genes chr2L 9977307 intergenic not near genes chr2L 9980900 intergenic not near genes chr2L_13_9975001 chr2L_9975001 CanS-JC 170 chr2L 10045390 10045422 chr2L 10045496 10045528 11 106 2.5 9.0 5.8 1.6 138 chr2L 10045390 intergenic not near genes chr2L 10045459 intergenic not near genes chr2L 10045528 intergenic not near genes chr2L_11_10045001 chr2L_10045001 CanS-JC 171 chr2L 10051712 10051752 chr2L 10051823 10051862 7 111 5.5 5.5 5.5 1.1 150 chr2L 10051712 5` UTR CR44874 + chr2L 10051787 5` UTR CR44874 + chr2L 10051862 5` UTR CR44874 + chr2L_7_10050001 chr2L_10050001 CanS-JC 172 chr2L 10110147 10110175 chr2L 10110252 10110280 9 105 2.5 3.5 3.0 2.2 133 chr2L 10110147 intron,intron CG44153 -,CG34109 + chr2L 10110214 intron,intron CG44153 -,CG34109 + chr2L 10110280 intron,intron CG44153 -,CG34109 + chr2L_9_10110001 chr2L_10110001 CanS-JC 173 chr2L 10138171 10138185 chr2L 10143441 10143455 Rt1c 4 5269 7.5 14.5 11.0 0.3 5284 chr2L 10138171 intron CG44153 - chr2L 10140813 intron CG44153 - chr2L 10143455 intron CG44153 - chr2L_4_10140001 chr2L_10140001 CanS-JC 174 chr2L 10153181 10153228 chr2L 10153286 10153333 18 103 3.5 4.0 3.8 3.8 152 chr2L 10153181 intron,exon CG44153 -,CG4839 + chr2L 10153257 intron,intron CG44153 -,CG4839 + chr2L 10153333 intron,exon CG44153 -,CG4839 + chr2L_18_10150001 chr2L_10150001 CanS-JC 175 chr2L 10156299 10156352 chr2L 10163795 10163848 blood 20 7495 6.5 3.5 5.0 3.3 7549 chr2L 10156299 intron,3` UTR CG44153 -,CG4839 + chr2L 10160074 intron CG44153 - chr2L 10163848 intron CG44153 - chr2L_20_10160001 chr2L_10160001 CanS-JC 176 chr2L 10176023 10176024 chr2L 16071771 16071771 4 5895748 20.5 18.5 19.5 0.2 5895748 chr2L 10176023 intron CG44153 - chr2L 13123897 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_4_13120001 chr2L_13120001 CanS-JC 177 chr2L 10227311 10227368 chr2L 10227488 10227546 15 177 2.5 2.5 2.5 4.3 235 chr2L 10227311 intergenic CG5694 - chr2L 10227428 intergenic CG5694 - chr2L 10227546 intergenic CG5694 - chr2L_15_10225001 chr2L_10225001 CanS-JC 178 chr2L 10232906 10232944 chr2L 10233010 10233048 12 104 2.5 4.0 3.2 2.9 142 chr2L 10232906 intron eEF1delta + chr2L 10232977 intron eEF1delta + chr2L 10233048 intron eEF1delta + chr2L_12_10230001 chr2L_10230001 CanS-JC 179 chr2L 10294655 10294679 chr2L 10294767 10294791 9 112 4.5 3.0 3.8 1.9 136 chr2L 10294655 intron Hand - chr2L 10294723 intron Hand - chr2L 10294791 intron Hand - chr2L_9_10290001 chr2L_10290001 CanS-JC 180 chr2L 10336805 10337049 chr2L 10336945 10337196 40 142 36.5 33.5 35.0 1.1 391 chr2L 10336805 exon GATAd + chr2L 10337000 exon GATAd + chr2L 10337196 exon GATAd + chr2L_40_10335001 chr2L_10335001 CanS-JC 181 chr2L 10337213 10337273 chr2L 10337366 10337426 29 152 25.0 29.0 27.0 1.0 213 chr2L 10337213 exon GATAd + chr2L 10337320 intron GATAd + chr2L 10337426 exon GATAd + chr2L_29_10335001 chr2L_10335001 CanS-JC 182 chr2L 10337517 10337575 chr2L 10338018 10338076 35 500 23.0 15.0 19.0 1.8 559 chr2L 10337517 exon GATAd + chr2L 10337796 intron GATAd + chr2L 10338076 exon GATAd + chr2L_35_10335001 chr2L_10335001 CanS-JC 183 chr2L 10338038 10338092 chr2L 10338232 10338286 28 194 13.5 24.0 18.8 1.4 248 chr2L 10338038 exon GATAd + chr2L 10338162 intron GATAd + chr2L 10338286 exon GATAd + chr2L_28_10335001 chr2L_10335001 CanS-JC 184 chr2L 10395455 10395499 chr2L 10395561 10395605 11 106 7.0 5.0 6.0 1.6 150 chr2L 10395455 intron Mdh1 - chr2L 10395530 intron Mdh1 - chr2L 10395605 intron Mdh1 - chr2L_11_10395001 chr2L_10395001 CanS-JC 185 chr2L 10421286 10421298 chr2L 10421400 10421413 6 115 11.0 8.5 9.8 0.6 127 chr2L 10421286 exon pie - chr2L 10421350 exon pie - chr2L 10421413 exon pie - chr2L_6_10420001 chr2L_10420001 CanS-JC 186 chr2L 10458092 10458102 chr2L 10458379 10458389 4 287 2.5 2.5 2.5 1.1 297 chr2L 10458092 intron LM408 + chr2L 10458240 intron LM408 + chr2L 10458389 intron LM408 + chr2L_4_10455001 chr2L_10455001 CanS-JC 187 chr2L 10495284 10495321 chr2L 10495387 10495403 11 101 9.5 7.5 8.5 1.2 119 chr2L 10495284 intron Myo31DF - chr2L 10495344 intron Myo31DF - chr2L 10495403 intron Myo31DF - chr2L_11_10495001 chr2L_10495001 CanS-JC 188 chr2L 10515337 10515389 chr2L 10515456 10515508 19 119 5.5 2.5 4.0 3.8 171 chr2L 10515337 intron,intron CG45083 -,Fatp - chr2L 10515422 intron,intron CG45083 -,Fatp - chr2L 10515508 intron,intron CG45083 -,Fatp - chr2L_19_10515001 chr2L_10515001 CanS-JC 189 chr2L 10531591 10531628 chr2L 10531709 10531746 8 118 0.0 3.5 1.8 2.9 155 chr2L 10531591 3` UTR Lip4 + chr2L 10531668 3` UTR Lip4 + chr2L 10531746 3` UTR Lip4 + chr2L_8_10530001 chr2L_10530001 CanS-JC 190 chr2L 10563887 10563945 chr2L 10564006 10564064 16 119 6.0 0.0 3.0 4.0 177 chr2L 10563887 intron Trim9 + chr2L 10563976 intron Trim9 + chr2L 10564064 intron Trim9 + chr2L_16_10560001 chr2L_10560001 CanS-JC 191 chr2L 10580767 10580824 chr2L 10580874 10580931 13 107 2.0 6.0 4.0 2.6 164 chr2L 10580767 intron Trim9 + chr2L 10580849 intron Trim9 + chr2L 10580931 intron Trim9 + chr2L_13_10580001 chr2L_10580001 CanS-JC 192 chr2L 10592819 10592874 chr2L 10600507 10600510 opus 16 7685 3.5 4.5 4.0 3.2 7691 chr2L 10592819 intron Trim9 + chr2L 10596664 intron Trim9 + chr2L 10600510 intron Trim9 + chr2L_16_10595001 chr2L_10595001 CanS-JC 193 chr2L 10604189 10604220 chr2L 10604297 10604328 7 107 3.0 3.0 3.0 1.8 139 chr2L 10604189 intron Trim9 + chr2L 10604258 intron Trim9 + chr2L 10604328 intron Trim9 + chr2L_7_10600001 chr2L_10600001 CanS-JC 194 chr2L 10633331 10633375 chr2L 10633444 10633488 17 112 7.0 4.0 5.5 2.6 157 chr2L 10633331 intron CG7329 - chr2L 10633410 intron CG7329 - chr2L 10633488 intron CG7329 - chr2L_17_10630001 chr2L_10630001 CanS-JC 195 chr2L 10634726 10634788 chr2L 10634832 10634894 17 106 2.5 0.0 1.2 7.7 168 chr2L 10634726 intron CG7329 - chr2L 10634810 intron CG7329 - chr2L 10634894 intron CG7329 - chr2L_17_10630001 chr2L_10630001 CanS-JC 196 chr2L 10686157 10686169 chr2L 10686268 10686280 7 111 3.0 0.0 1.5 2.8 123 chr2L 10686157 3` UTR CG7296 - chr2L 10686218 3` UTR CG7296 - chr2L 10686280 3` UTR CG7296 - chr2L_7_10685001 chr2L_10685001 CanS-JC 197 chr2L 10688519 10688566 chr2L 10688621 10688668 8 102 2.5 2.5 2.5 2.3 149 chr2L 10688519 intergenic CG7294 - chr2L 10688594 intergenic CG7294 - chr2L 10688668 intergenic CG7294 - chr2L_8_10685001 chr2L_10685001 CanS-JC 198 chr2L 10690400 10690438 chr2L 10690992 10691024 5 587 0.0 6.0 3.0 1.2 624 chr2L 10690400 intergenic not near genes chr2L 10690712 intergenic not near genes chr2L 10691024 intergenic not near genes chr2L_5_10690001 chr2L_10690001 CanS-JC 199 chr2L 10701689 10701738 chr2L 10701795 10701844 12 106 4.0 0.0 2.0 4.0 155 chr2L 10701689 intergenic Lip1 -,Lip2 - chr2L 10701766 intergenic Lip2 -,Lip1 - chr2L 10701844 intergenic Lip2 -,Lip1 - chr2L_12_10700001 chr2L_10700001 CanS-JC 200 chr2L 10723517 10723540 chr2L 10723637 10723660 7 120 5.0 0.5 2.8 1.8 143 chr2L 10723517 intergenic not near genes chr2L 10723588 intergenic not near genes chr2L 10723660 intergenic not near genes chr2L_7_10720001 chr2L_10720001 CanS-JC 201 chr2L 10862834 10862863 chr2L 10864474 10864502 Rt1c 12 1640 5.5 9.0 7.2 1.5 1668 chr2L 10862834 3` UTR CR43807 - chr2L 10863668 intron CR43807 - chr2L 10864502 3` UTR CR43807 - chr2L_12_10860001 chr2L_10860001 CanS-JC 202 chr2L 10873027 10873083 chr2L 10873133 10873189 22 106 1.5 3.0 2.2 6.9 162 chr2L 10873027 intergenic not near genes chr2L 10873108 intergenic not near genes chr2L 10873189 intergenic not near genes chr2L_22_10870001 chr2L_10870001 CanS-JC 203 chr2L 10912963 10912994 chr2L 10913068 10913070 10 102 7.0 7.0 7.0 1.2 107 chr2L 10912963 intergenic not near genes chr2L 10913016 intergenic not near genes chr2L 10913070 intergenic not near genes chr2L_10_10910001 chr2L_10910001 CanS-JC 204 chr2L 10919786 10919811 chr2L 10919889 10919926 13 114 6.0 3.5 4.8 2.2 140 chr2L 10919786 intron dpr2 - chr2L 10919856 intron dpr2 - chr2L 10919926 intron dpr2 - chr2L_13_10915001 chr2L_10915001 CanS-JC 205 chr2L 10946925 10946976 chr2L 10956166 10956217 roo 10 9241 7.5 6.5 7.0 1.2 9292 chr2L 10946925 intron dpr2 - chr2L 10951571 intron dpr2 - chr2L 10956217 intron dpr2 - chr2L_10_10950001 chr2L_10950001 CanS-JC 206 chr2L 11055042 11055073 chr2L 11055153 11055184 5 111 4.0 6.5 5.2 0.8 142 chr2L 11055042 intron Samuel - chr2L 11055113 intron Samuel - chr2L 11055184 intron Samuel - chr2L_5_11055001 chr2L_11055001 CanS-JC 207 chr2L 11076563 11076588 chr2L 11076666 11076691 11 103 1.0 4.5 2.8 2.9 128 chr2L 11076563 3` UTR AstC - chr2L 11076627 3` UTR AstC - chr2L 11076691 3` UTR AstC - chr2L_11_11075001 chr2L_11075001 CanS-JC 208 chr2L 11190447 11190458 chr2L 11190890 11190901 9 442 15.0 3.0 9.0 0.9 454 chr2L 11190447 intron Ca-beta - chr2L 11190674 intron Ca-beta - chr2L 11190901 intron Ca-beta - chr2L_9_11190001 chr2L_11190001 CanS-JC 209 chr2L 11190460 11190498 chr2L 11190887 11190941 17 442 9.5 3.0 6.2 2.4 481 chr2L 11190460 intron Ca-beta - chr2L 11190700 intron Ca-beta - chr2L 11190941 intron Ca-beta - chr2L_17_11190001 chr2L_11190001 CanS-JC 210 chr2L 12067315 12067346 chr2L 12074393 12074424 297 5 7078 5.5 4.5 5.0 0.8 7109 chr2L 12067315 intergenic not near genes chr2L 12070870 intergenic not near genes chr2L 12074424 intergenic not near genes chr2L_5_12070001 chr2L_12070001 CanS-JC 211 chr2L 12123272 12123274 chr2L 12123383 12123385 4 111 4.5 7.0 5.8 0.6 113 chr2L 12123272 intron CG17211 + chr2L 12123328 intron CG17211 + chr2L 12123385 intron CG17211 + chr2L_4_12120001 chr2L_12120001 CanS-JC 212 chr2L 12132696 12132747 chr2L 12132808 12132859 12 112 0.0 3.0 1.5 4.8 163 chr2L 12132696 intron rho-6 - chr2L 12132778 intron rho-6 - chr2L 12132859 intron rho-6 - chr2L_12_12130001 chr2L_12130001 CanS-JC 213 chr2L 12315631 12315687 chr2L 12316122 12316177 7 490 3.0 0.5 1.8 2.5 546 chr2L 12315631 intergenic CR45282 - chr2L 12315904 3` UTR CR45282 - chr2L 12316177 intergenic CR45282 -,CR45283 - chr2L_7_12315001 chr2L_12315001 CanS-JC 214 chr2L 12322752 12322798 chr2L 12322851 12322895 7 101 7.5 3.0 5.2 1.1 143 chr2L 12322752 intergenic not near genes chr2L 12322824 intergenic not near genes chr2L 12322895 intergenic not near genes chr2L_7_12320001 chr2L_12320001 CanS-JC 215 chr2L 12345382 12345421 chr2L 12345486 12345499 14 102 6.0 6.5 6.2 1.9 117 chr2L 12345382 intron bru-2 + chr2L 12345440 intron bru-2 + chr2L 12345499 intron bru-2 + chr2L_14_12345001 chr2L_12345001 CanS-JC 216 chr2L 12361011 12361040 chr2L 12361190 12361219 12 178 2.5 4.5 3.5 2.7 208 chr2L 12361011 intron bru-2 + chr2L 12361115 intron bru-2 + chr2L 12361219 intron bru-2 + chr2L_12_12360001 chr2L_12360001 CanS-JC 217 chr2L 12418403 12418438 chr2L 12418512 12418547 6 109 3.5 9.5 6.5 0.8 144 chr2L 12418403 intron vir-1 - chr2L 12418475 intron vir-1 - chr2L 12418547 intron vir-1 - chr2L_6_12415001 chr2L_12415001 CanS-JC 218 chr2L 12424344 12424380 chr2L 12424446 12424482 7 102 0.0 1.0 0.5 4.7 138 chr2L 12424344 intergenic not near genes chr2L 12424413 intergenic CG6405 + chr2L 12424482 intergenic CG6405 + chr2L_7_12420001 chr2L_12420001 CanS-JC 219 chr2L 12426107 12426164 chr2L 12426216 12426273 19 108 6.5 7.0 6.8 2.4 166 chr2L 12426107 exon CG6405 + chr2L 12426190 exon CG6405 + chr2L 12426273 exon CG6405 + chr2L_19_12425001 chr2L_12425001 CanS-JC 220 chr2L 12471108 12471141 chr2L 12471210 12471243 6 102 4.0 9.0 6.5 0.8 135 chr2L 12471108 intron bun - chr2L 12471176 intron bun - chr2L 12471243 intron bun - chr2L_6_12470001 chr2L_12470001 CanS-JC 221 chr2L 12487880 12487913 chr2L 12487987 12488020 6 107 7.0 6.0 6.5 0.8 140 chr2L 12487880 intron bun - chr2L 12487950 intron bun - chr2L 12488020 intron bun - chr2L_6_12485001 chr2L_12485001 CanS-JC 222 chr2L 12521260 12521280 chr2L 12521501 12521521 8 241 3.5 8.0 5.8 1.2 261 chr2L 12521260 intron bun - chr2L 12521390 intron bun - chr2L 12521521 intron bun - chr2L_8_12520001 chr2L_12520001 CanS-JC 223 chr2L 12558294 12558352 chr2L 12565449 12565507 HMS-Beagle 19 7155 2.0 4.0 3.0 4.8 7213 chr2L 12558294 intergenic not near genes chr2L 12561900 intergenic not near genes chr2L 12565507 intergenic not near genes chr2L_19_12560001 chr2L_12560001 CanS-JC 224 chr2L 12567447 12567462 chr2L 12567572 12567587 5 125 8.5 8.5 8.5 0.5 140 chr2L 12567447 intergenic not near genes chr2L 12567517 intergenic not near genes chr2L 12567587 intergenic not near genes chr2L_5_12565001 chr2L_12565001 CanS-JC 225 chr2L 12619880 12619900 chr2L 12619982 12620002 10 102 5.0 4.0 4.5 1.8 122 chr2L 12619880 intron,intron nub +,Ref2 - chr2L 12619941 intron,intron nub +,Ref2 - chr2L 12620002 intron,intron nub +,Ref2 - chr2L_10_12615001 chr2L_12615001 CanS-JC 226 chr2L 12728902 12728945 chr2L 12729168 12729211 pogo 13 266 6.0 2.5 4.2 2.5 309 chr2L 12728902 intron MRP + chr2L 12729056 intron MRP + chr2L 12729211 exon MRP + chr2L_13_12725001 chr2L_12725001 CanS-JC 227 chr2L 12731034 12731084 chr2L 12735827 12735877 F-element 16 4793 2.0 2.5 2.2 5.0 4843 chr2L 12731034 intron MRP + chr2L 12733456 intron MRP + chr2L 12735877 intron MRP + chr2L_16_12730001 chr2L_12730001 CanS-JC 228 chr2L 12736647 12736702 chr2L 12736749 12736804 10 101 4.5 4.5 4.5 1.8 157 chr2L 12736647 intron MRP + chr2L 12736726 intron MRP + chr2L 12736804 intron MRP + chr2L_10_12735001 chr2L_12735001 CanS-JC 229 chr2L 12739151 12739195 chr2L 12743958 12744002 Doc 10 4807 7.5 3.5 5.5 1.5 4851 chr2L 12739151 exon MRP + chr2L 12741576 intron MRP + chr2L 12744002 exon MRP + chr2L_10_12740001 chr2L_12740001 CanS-JC 230 chr2L 12751288 12751336 chr2L 12751397 12751445 19 106 6.0 4.5 5.2 3.1 157 chr2L 12751288 intergenic not near genes chr2L 12751366 intergenic not near genes chr2L 12751445 intergenic not near genes chr2L_19_12750001 chr2L_12750001 CanS-JC 231 chr2L 12781783 12781808 chr2L 12789252 12789277 Quasimodo 7 7469 3.0 5.5 4.2 1.3 7494 chr2L 12781783 intergenic not near genes chr2L 12785530 intergenic not near genes chr2L 12789277 intergenic not near genes chr2L_7_12785001 chr2L_12785001 CanS-JC 232 chr2L 12791582 12791628 chr2L 12795283 12795329 F-element 18 3701 5.5 7.5 6.5 2.4 3747 chr2L 12791582 intergenic not near genes chr2L 12793456 intergenic not near genes chr2L 12795329 intergenic not near genes chr2L_18_12790001 chr2L_12790001 CanS-JC 233 chr2L 12809552 12809586 chr2L 12810192 12810226 11 640 4.0 2.5 3.2 2.6 674 chr2L 12809552 intergenic not near genes chr2L 12809889 intergenic not near genes chr2L 12810226 intergenic not near genes chr2L_11_12805001 chr2L_12805001 CanS-JC 234 chr2L 12811461 12811473 chr2L 12811582 12811598 5 124 0.0 10.0 5.0 0.8 137 chr2L 12811461 intergenic not near genes chr2L 12811530 intergenic not near genes chr2L 12811598 intergenic not near genes chr2L_5_12810001 chr2L_12810001 CanS-JC 235 chr2L 12894010 12894048 chr2L 12895503 12895510 hobo 9 1490 5.0 9.0 7.0 1.1 1500 chr2L 12894010 intergenic not near genes chr2L 12894760 intergenic not near genes chr2L 12895510 intergenic not near genes chr2L_9_12890001 chr2L_12890001 CanS-JC 236 chr2L 12897583 12897637 chr2L 12897836 12897890 19 253 5.0 4.5 4.8 3.3 307 chr2L 12897583 intergenic not near genes chr2L 12897736 intergenic not near genes chr2L 12897890 intergenic not near genes chr2L_19_12895001 chr2L_12895001 CanS-JC 237 chr2L 12905449 12905501 chr2L 12905559 12905598 13 109 4.0 2.0 3.0 3.2 149 chr2L 12905449 intergenic not near genes chr2L 12905524 intergenic not near genes chr2L 12905598 intergenic not near genes chr2L_13_12905001 chr2L_12905001 CanS-JC 238 chr2L 12933828 12933879 chr2L 12941321 12941371 blood 20 7493 3.5 9.0 6.2 2.8 7543 chr2L 12933828 intergenic not near genes chr2L 12937600 intergenic not near genes chr2L 12941371 intergenic not near genes chr2L_20_12935001 chr2L_12935001 CanS-JC 239 chr2L 12949226 12949284 chr2L 12949345 12949403 17 119 9.5 2.5 6.0 2.4 177 chr2L 12949226 intergenic not near genes chr2L 12949314 intergenic not near genes chr2L 12949403 intergenic not near genes chr2L_17_12945001 chr2L_12945001 CanS-JC 240 chr2L 12955848 12955895 chr2L 12956074 12956119 14 226 5.0 7.5 6.2 1.9 271 chr2L 12955848 intergenic not near genes chr2L 12955984 intergenic not near genes chr2L 12956119 intergenic not near genes chr2L_14_12955001 chr2L_12955001 CanS-JC 241 chr2L 13043378 13043425 chr2L 13043483 13043529 7 105 5.0 2.5 3.8 1.5 151 chr2L 13043378 intron CG9932 - chr2L 13043454 intron CG9932 - chr2L 13043529 intron CG9932 - chr2L_7_13040001 chr2L_13040001 CanS-JC 242 chr2L 13109430 13109476 chr2L 13109584 13109630 4 154 5.0 4.5 4.8 0.7 200 chr2L 13109430 3` UTR CG5142 + chr2L 13109530 intergenic CG5142 + chr2L 13109630 intergenic CG5142 + chr2L_4_13105001 chr2L_13105001 CanS-JC 243 chr2L 13152218 13152230 chr2L 13152322 13152334 11 104 13.5 4.5 9.0 1.1 116 chr2L 13152218 intergenic not near genes chr2L 13152276 intergenic not near genes chr2L 13152334 intergenic not near genes chr2L_11_13150001 chr2L_13150001 CanS-JC 244 chr2L 13215365 13215396 chr2L 13215666 13215697 8 301 3.0 3.5 3.2 1.9 332 chr2L 13215365 intergenic kek4 -,snRNA:U2:34ABb +,snRNA:U2:34ABc + chr2L 13215531 intergenic kek4 -,snRNA:U2:34ABb +,snRNA:U2:34ABc + chr2L 13215697 intergenic snRNA:U2:34ABb +,snRNA:U2:34ABc +,kek4 - chr2L_8_13215001 chr2L_13215001 CanS-JC 245 chr2L 13405623 13405673 chr2L 13410446 13410496 Doc 28 4823 5.0 6.0 5.5 4.3 4873 chr2L 13405623 exon CG7110 + chr2L 13408060 intron CG7110 + chr2L 13410496 intron CG7110 + chr2L_28_13405001 chr2L_13405001 CanS-JC 246 chr2L 13422422 13422492 chr2L 13422549 13422597 6 109 0.0 8.0 4.0 1.2 175 chr2L 13422422 intron CG42784 + chr2L 13422510 intron CG42784 + chr2L 13422597 intron CG42784 + chr2L_6_13420001 chr2L_13420001 CanS-JC 247 chr2L 13481431 13481463 chr2L 13482064 13482096 jockey 12 633 8.5 8.5 8.5 1.3 665 chr2L 13481431 intron CG42784 + chr2L 13481764 intron CG42784 + chr2L 13482096 intron CG42784 + chr2L_12_13480001 chr2L_13480001 CanS-JC 248 chr2L 13560376 13560420 chr2L 13565223 13565267 F-element 11 4846 3.5 0.5 2.0 3.7 4891 chr2L 13560376 intron kuz + chr2L 13562822 intron kuz + chr2L 13565267 intron kuz + chr2L_11_13560001 chr2L_13560001 CanS-JC 249 chr2L 13577381 13577392 chr2L 13577485 13577496 4 104 2.0 10.5 6.2 0.6 115 chr2L 13577381 intron kuz + chr2L 13577438 intron kuz + chr2L 13577496 intron kuz + chr2L_4_13575001 chr2L_13575001 CanS-JC 250 chr2L 13684273 13684289 chr2L 13684375 13684380 6 100 3.0 6.0 4.5 1.1 107 chr2L 13684273 intron CG31814 - chr2L 13684326 intron CG31814 - chr2L 13684380 intron CG31814 - chr2L_6_13680001 chr2L_13680001 CanS-JC 251 chr2L 13713542 13713567 chr2L 13713644 13713669 8 102 0.0 1.5 0.8 4.4 127 chr2L 13713542 intron CG31814 - chr2L 13713606 intron CG31814 - chr2L 13713669 intron CG31814 - chr2L_8_13710001 chr2L_13710001 CanS-JC 252 chr2L 13714840 13714876 chr2L 13715011 13715047 6 171 0.0 6.5 3.2 1.4 207 chr2L 13714840 intron CG31814 - chr2L 13714944 intron CG31814 - chr2L 13715047 intron CG31814 - chr2L_6_13710001 chr2L_13710001 CanS-JC 253 chr2L 13733747 13733788 chr2L 13733892 13733933 12 145 1.5 3.5 2.5 3.4 186 chr2L 13733747 intergenic not near genes chr2L 13733840 intergenic not near genes chr2L 13733933 intergenic not near genes chr2L_12_13730001 chr2L_13730001 CanS-JC 254 chr2L 13761789 13761827 chr2L 13762926 13762964 Doc 10 1137 6.5 7.0 6.8 1.3 1175 chr2L 13761789 intron TM9SF4 + chr2L 13762376 intron TM9SF4 + chr2L 13762964 intron TM9SF4 + chr2L_10_13760001 chr2L_13760001 CanS-JC 255 chr2L 13800166 13800204 chr2L 13800296 13800334 11 128 1.5 5.0 3.2 2.6 168 chr2L 13800166 intergenic Sec71 + chr2L 13800250 intergenic not near genes chr2L 13800334 intergenic not near genes chr2L_11_13800001 chr2L_13800001 CanS-JC 256 chr2L 13804674 13804729 chr2L 13804786 13804841 11 112 3.0 2.0 2.5 3.1 167 chr2L 13804674 intron CAH1 + chr2L 13804758 intron CAH1 + chr2L 13804841 intron CAH1 + chr2L_11_13800001 chr2L_13800001 CanS-JC 257 chr2L 13842104 13842163 chr2L 13842214 13842273 13 110 1.5 2.0 1.8 4.6 169 chr2L 13842104 intron CenG1A + chr2L 13842188 intron CenG1A + chr2L 13842273 intron CenG1A + chr2L_13_13840001 chr2L_13840001 CanS-JC 258 chr2L 13853066 13853111 chr2L 13862242 13862287 roo 12 9175 6.5 6.0 6.2 1.7 9221 chr2L 13853066 intron CenG1A + chr2L 13857676 intron CenG1A + chr2L 13862287 intron CenG1A + chr2L_12_13855001 chr2L_13855001 CanS-JC 259 chr2L 13981497 13981549 chr2L 13981614 13981666 10 117 6.5 5.5 6.0 1.4 169 chr2L 13981497 exon NimC2 + chr2L 13981582 intron NimC2 + chr2L 13981666 intron NimC2 + chr2L_10_13980001 chr2L_13980001 CanS-JC 260 chr2L 13988265 13988302 chr2L 13988378 13988415 9 113 2.0 5.5 3.8 1.9 150 chr2L 13988265 intron rk - chr2L 13988340 intron rk - chr2L 13988415 intron rk - chr2L_9_13985001 chr2L_13985001 CanS-JC 261 chr2L 14246261 14246301 chr2L 14246364 14246397 7 103 0.0 0.0 0.0 7.0 136 chr2L 14246261 intergenic not near genes chr2L 14246329 intergenic not near genes chr2L 14246397 intergenic not near genes chr2L_7_14245001 chr2L_14245001 CanS-JC 262 chr2L 14314610 14314652 chr2L 14314701 14314727 13 104 4.5 4.5 4.5 2.4 117 chr2L 14314610 intron wb + chr2L 14314668 intron wb + chr2L 14314727 intron wb + chr2L_13_14310001 chr2L_14310001 CanS-JC 263 chr2L 14367840 14367889 chr2L 14367946 14367993 13 106 3.5 3.5 3.5 2.9 153 chr2L 14367840 intergenic not near genes chr2L 14367916 intergenic not near genes chr2L 14367993 intergenic not near genes chr2L_13_14365001 chr2L_14365001 CanS-JC 264 chr2L 14374755 14374799 chr2L 14374872 14374916 12 117 5.0 5.5 5.2 1.9 161 chr2L 14374755 intergenic not near genes chr2L 14374836 intergenic not near genes chr2L 14374916 intergenic not near genes chr2L_12_14370001 chr2L_14370001 CanS-JC 265 chr2L 14385506 14385562 chr2L 14385609 14385665 21 102 4.0 3.0 3.5 4.7 159 chr2L 14385506 intergenic not near genes chr2L 14385586 intergenic not near genes chr2L 14385665 intergenic not near genes chr2L_21_14385001 chr2L_14385001 CanS-JC 266 chr2L 14516397 14516448 chr2L 14516601 14516652 18 204 1.0 1.0 1.0 9.0 255 chr2L 14516397 intergenic not near genes chr2L 14516524 intergenic not near genes chr2L 14516652 intergenic not near genes chr2L_18_14515001 chr2L_14515001 CanS-JC 267 chr2L 14564173 14564227 chr2L 14564275 14564329 20 102 3.5 8.0 5.8 2.9 156 chr2L 14564173 intergenic CG3473 - chr2L 14564251 intergenic not near genes chr2L 14564329 intergenic not near genes chr2L_20_14560001 chr2L_14560001 CanS-JC 268 chr2L 14570708 14570721 chr2L 14570815 14570828 4 107 0.0 5.5 2.8 1.1 120 chr2L 14570708 intergenic not near genes chr2L 14570768 intergenic not near genes chr2L 14570828 intergenic not near genes chr2L_4_14570001 chr2L_14570001 CanS-JC 269 chr2L 14624527 14624560 chr2L 14624632 14624665 8 105 0.5 2.0 1.2 3.6 138 chr2L 14624527 intron osp - chr2L 14624596 intron osp - chr2L 14624665 intron osp - chr2L_8_14620001 chr2L_14620001 CanS-JC 270 chr2L 14642554 14642601 chr2L 14651743 14651790 roo 7 9189 4.5 6.0 5.2 1.1 9236 chr2L 14642554 intron osp - chr2L 14647172 intron osp - chr2L 14651790 intron osp - chr2L_7_14645001 chr2L_14645001 CanS-JC 271 chr2L 14658896 14658946 chr2L 14659005 14659055 6 109 4.5 5.5 5.0 1.0 159 chr2L 14658896 intron osp - chr2L 14658976 intron osp - chr2L 14659055 intron osp - chr2L_6_14655001 chr2L_14655001 CanS-JC 272 chr2L 14778782 14778837 chr2L 14779095 14779151 12 313 6.5 4.0 5.2 1.9 369 chr2L 14778782 intergenic not near genes chr2L 14778966 intergenic not near genes chr2L 14779151 intergenic not near genes chr2L_12_14775001 chr2L_14775001 CanS-JC 273 chr2L 14803887 14803908 chr2L 14809116 14809137 copia 7 5229 0.0 10.0 5.0 1.2 5250 chr2L 14803887 intergenic not near genes chr2L 14806512 intergenic not near genes chr2L 14809137 intergenic not near genes chr2L_7_14805001 chr2L_14805001 CanS-JC 274 chr2L 14833768 14833823 chr2L 14833898 14833953 13 130 1.0 4.0 2.5 3.7 185 chr2L 14833768 intergenic not near genes chr2L 14833860 intergenic not near genes chr2L 14833953 intergenic not near genes chr2L_13_14830001 chr2L_14830001 CanS-JC 275 chr2L 14840956 14841006 chr2L 14841070 14841119 9 113 5.0 7.0 6.0 1.3 163 chr2L 14840956 3` UTR CR43805 - chr2L 14841038 3` UTR CR43805 - chr2L 14841119 3` UTR CR43805 - chr2L_9_14840001 chr2L_14840001 CanS-JC 276 chr2L 14843480 14843497 chr2L 14843811 14843828 7 331 4.0 7.5 5.8 1.0 348 chr2L 14843480 intergenic CG42682 + chr2L 14843654 intergenic not near genes chr2L 14843828 intergenic not near genes chr2L_7_14840001 chr2L_14840001 CanS-JC 277 chr2L 14856959 14857016 chr2L 14857074 14857131 12 115 4.0 1.5 2.8 3.2 172 chr2L 14856959 intergenic not near genes chr2L 14857045 intergenic not near genes chr2L 14857131 intergenic not near genes chr2L_12_14855001 chr2L_14855001 CanS-JC 278 chr2L 14889931 14889978 chr2L 14890382 14890429 jockey 11 451 4.5 5.0 4.8 1.9 498 chr2L 14889931 intergenic not near genes chr2L 14890180 intergenic not near genes chr2L 14890429 intergenic not near genes chr2L_11_14890001 chr2L_14890001 CanS-JC 279 chr2L 14982116 14982289 chr2L 14982249 14982401 11 118 0.0 0.0 0.0 11.0 285 chr2L 14982116 intron mol - chr2L 14982258 intron mol - chr2L 14982401 intron mol - chr2L_11_14980001 chr2L_14980001 CanS-JC 280 chr2L 14992035 14992084 chr2L 14992152 14992201 12 117 2.0 4.0 3.0 3.0 166 chr2L 14992035 intron mol - chr2L 14992118 intron mol - chr2L 14992201 intron mol - chr2L_12_14990001 chr2L_14990001 CanS-JC 281 chr2L 15044681 15044728 chr2L 15044783 15044825 14 102 3.0 0.5 1.8 5.0 144 chr2L 15044681 intergenic ck - chr2L 15044753 intergenic ck - chr2L 15044825 intergenic ck - chr2L_14_15040001 chr2L_15040001 CanS-JC 282 chr2L 15077865 15078101 chr2L 15077979 15078215 27 114 2.0 2.5 2.2 8.4 350 chr2L 15077865 intron CG15270 + chr2L 15078040 intron CG15270 + chr2L 15078215 intron CG15270 + chr2L_27_15075001 chr2L_15075001 CanS-JC 283 chr2L 15098518 15098541 chr2L 15098624 15098647 6 106 5.0 2.5 3.8 1.2 129 chr2L 15098518 intergenic not near genes chr2L 15098582 intergenic not near genes chr2L 15098647 intergenic not near genes chr2L_6_15095001 chr2L_15095001 CanS-JC 284 chr2L 15111913 15111956 chr2L 15112048 15112091 11 135 2.5 2.0 2.2 3.4 178 chr2L 15111913 intron CG15269 + chr2L 15112002 intron CG15269 + chr2L 15112091 intron CG15269 + chr2L_11_15110001 chr2L_15110001 CanS-JC 285 chr2L 15163918 15163931 chr2L 15164021 15164034 4 103 4.0 3.0 3.5 0.9 116 chr2L 15163918 intron CG4168 - chr2L 15163976 intron CG4168 - chr2L 15164034 intron CG4168 - chr2L_4_15160001 chr2L_15160001 CanS-JC 286 chr2L 15204281 15204310 chr2L 15204585 15204617 7 307 0.0 5.5 2.8 1.8 336 chr2L 15204281 intergenic CR43357 + chr2L 15204449 intergenic CR43357 + chr2L 15204617 intergenic not near genes chr2L_7_15200001 chr2L_15200001 CanS-JC 287 chr2L 15226346 15226395 chr2L 15226448 15226497 16 102 4.0 2.5 3.2 3.8 151 chr2L 15226346 intergenic not near genes chr2L 15226422 intergenic not near genes chr2L 15226497 intergenic not near genes chr2L_16_15225001 chr2L_15225001 CanS-JC 288 chr2L 15238775 15238809 chr2L 15238883 15238917 13 107 7.0 8.0 7.5 1.5 142 chr2L 15238775 intron ZnT35C - chr2L 15238846 intron ZnT35C - chr2L 15238917 intron ZnT35C - chr2L_13_15235001 chr2L_15235001 CanS-JC 289 chr2L 15240197 15240247 chr2L 15240334 15240384 12 137 4.5 8.5 6.5 1.6 187 chr2L 15240197 intron ZnT35C - chr2L 15240290 intron ZnT35C - chr2L 15240384 intron ZnT35C - chr2L_12_15240001 chr2L_15240001 CanS-JC 290 chr2L 15346001 15346031 chr2L 15346108 15346138 15 106 4.5 3.5 4.0 3.0 137 chr2L 15346001 intergenic not near genes chr2L 15346070 intergenic not near genes chr2L 15346138 intergenic not near genes chr2L_15_15345001 chr2L_15345001 CanS-JC 291 chr2L 15351433 15351481 chr2L 15351537 15351585 14 103 5.0 7.0 6.0 2.0 152 chr2L 15351433 intergenic not near genes chr2L 15351509 intergenic not near genes chr2L 15351585 intergenic not near genes chr2L_14_15350001 chr2L_15350001 CanS-JC 292 chr2L 15384793 15384844 chr2L 15385181 15385232 13 388 2.5 5.0 3.8 2.7 439 chr2L 15384793 intergenic not near genes chr2L 15385012 intergenic not near genes chr2L 15385232 intergenic not near genes chr2L_13_15385001 chr2L_15385001 CanS-JC 293 chr2L 15446023 15446077 chr2L 15453518 15453572 blood 10 7495 4.0 3.0 3.5 2.2 7549 chr2L 15446023 intergenic not near genes chr2L 15449798 intergenic not near genes chr2L 15453572 intergenic not near genes chr2L_10_15445001 chr2L_15445001 CanS-JC 294 chr2L 15499885 15499939 chr2L 15499999 15500052 8 114 1.0 3.5 2.2 2.5 167 chr2L 15499885 intron lace + chr2L 15499968 intron lace + chr2L 15500052 intron lace + chr2L_8_15495001 chr2L_15495001 CanS-JC 295 chr2L 15510922 15510966 chr2L 15511042 15511086 19 120 4.0 3.5 3.8 4.0 164 chr2L 15510922 intergenic not near genes chr2L 15511004 intergenic not near genes chr2L 15511086 intergenic not near genes chr2L_19_15510001 chr2L_15510001 CanS-JC 296 chr2L 15538456 15538510 chr2L 15538573 15538627 17 117 1.5 0.0 0.8 9.4 171 chr2L 15538456 intergenic not near genes chr2L 15538542 intergenic not near genes chr2L 15538627 intergenic not near genes chr2L_17_15535001 chr2L_15535001 CanS-JC 297 chr2L 15544358 15544414 chr2L 15544459 15544519 14 102 6.5 2.0 4.2 2.7 161 chr2L 15544358 intergenic not near genes chr2L 15544438 intergenic not near genes chr2L 15544519 intergenic not near genes chr2L_14_15540001 chr2L_15540001 CanS-JC 298 chr2L 15586396 15586432 chr2L 15593472 15593510 297 10 7078 3.0 10.0 6.5 1.3 7114 chr2L 15586396 intergenic not near genes chr2L 15589953 intergenic not near genes chr2L 15593510 intergenic not near genes chr2L_10_15585001 chr2L_15585001 CanS-JC 299 chr2L 15598770 15598788 chr2L 15598875 15598880 7 103 3.0 2.0 2.5 2.0 110 chr2L 15598770 intergenic not near genes chr2L 15598825 intergenic not near genes chr2L 15598880 intergenic not near genes chr2L_7_15595001 chr2L_15595001 CanS-JC 300 chr2L 15732484 15732525 chr2L 15732605 15732646 7 121 7.0 1.0 4.0 1.4 162 chr2L 15732484 intron CycE - chr2L 15732565 intron CycE - chr2L 15732646 intron CycE - chr2L_7_15730001 chr2L_15730001 CanS-JC 301 chr2L 15819292 15819341 chr2L 15819394 15819443 11 101 2.0 3.5 2.8 2.9 151 chr2L 15819292 intergenic not near genes chr2L 15819368 intergenic not near genes chr2L 15819443 intergenic not near genes chr2L_11_15815001 chr2L_15815001 CanS-JC 302 chr2L 15843188 15843241 chr2L 15845874 15845927 17 2686 22.0 21.0 21.5 0.8 2739 chr2L 15843188 intergenic not near genes chr2L 15844558 intergenic not near genes chr2L 15845927 intergenic not near genes chr2L_17_15840001 chr2L_15840001 CanS-JC 303 chr2L 15935166 15935220 chr2L 15935281 15935336 16 115 0.0 0.0 0.0 16.0 170 chr2L 15935166 intron beat-Ib - chr2L 15935251 intron beat-Ib - chr2L 15935336 intron beat-Ib - chr2L_16_15935001 chr2L_15935001 CanS-JC 304 chr2L 15945452 15945484 chr2L 15945619 15945651 12 167 4.5 4.0 4.2 2.3 199 chr2L 15945452 intron beat-Ib - chr2L 15945552 intron beat-Ib - chr2L 15945651 intron beat-Ib - chr2L_12_15945001 chr2L_15945001 CanS-JC 305 chr2L 15956000 15956048 chr2L 15957493 15957541 hobo 18 1493 6.5 1.5 4.0 3.6 1541 chr2L 15956000 intron beat-Ib - chr2L 15956770 intron beat-Ib - chr2L 15957541 intron beat-Ib - chr2L_18_15955001 chr2L_15955001 CanS-JC 306 chr2L 16008665 16008721 chr2L 16008769 16008825 8 104 5.0 0.5 2.8 2.1 160 chr2L 16008665 intron beat-Ic + chr2L 16008745 intron beat-Ic + chr2L 16008825 intron beat-Ic + chr2L_8_16005001 chr2L_16005001 CanS-JC 307 chr2L 16058103 16058142 chr2L 16058270 16058309 6 167 4.0 1.0 2.5 1.7 206 chr2L 16058103 intron beat-Ia + chr2L 16058206 intron beat-Ia + chr2L 16058309 intron beat-Ia + chr2L_6_16055001 chr2L_16055001 CanS-JC 308 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 7 145889 22.0 25.5 23.8 0.3 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_7_16140001 chr2L_16140001 CanS-JC 309 chr2L 16141174 16141188 chr2L 16146407 16146421 copia 4 5233 0.0 7.0 3.5 0.9 5247 chr2L 16141174 intergenic not near genes chr2L 16143798 intergenic not near genes chr2L 16146421 intergenic not near genes chr2L_4_16140001 chr2L_16140001 CanS-JC 310 chr2L 16153712 16153748 chr2L 16160792 16160828 297 4 7080 7.0 4.0 5.5 0.6 7116 chr2L 16153712 intergenic not near genes chr2L 16157270 intergenic not near genes chr2L 16160828 intergenic not near genes chr2L_4_16155001 chr2L_16155001 CanS-JC 311 chr2L 16161434 16161480 chr2L 16161558 16161604 11 124 4.5 6.5 5.5 1.7 170 chr2L 16161434 intergenic not near genes chr2L 16161519 intergenic not near genes chr2L 16161604 intergenic not near genes chr2L_11_16160001 chr2L_16160001 CanS-JC 312 chr2L 16174586 16174596 chr2L 16174688 16174698 5 102 13.5 0.0 6.8 0.6 112 chr2L 16174586 intron Ca-alpha1D + chr2L 16174642 intron Ca-alpha1D + chr2L 16174698 intron Ca-alpha1D + chr2L_5_16170001 chr2L_16170001 CanS-JC 313 chr2L 16280247 16280283 chr2L 16281444 16281480 1360 12 1196 7.0 5.5 6.2 1.7 1233 chr2L 16280247 intron crp - chr2L 16280864 intron crp - chr2L 16281480 intron crp - chr2L_12_16280001 chr2L_16280001 CanS-JC 314 chr2L 16354760 16354784 chr2L 16354878 16354902 7 118 2.0 5.0 3.5 1.6 142 chr2L 16354760 intergenic CaBP1 -,CG4455 + chr2L 16354831 intergenic CaBP1 -,CG4455 + chr2L 16354902 3` UTR CaBP1 - chr2L_7_16350001 chr2L_16350001 CanS-JC 315 chr2L 16363915 16363960 chr2L 16364187 16364232 12 272 2.0 2.5 2.2 3.8 317 chr2L 16363915 intergenic not near genes chr2L 16364074 intergenic not near genes chr2L 16364232 intergenic not near genes chr2L_12_16360001 chr2L_16360001 CanS-JC 316 chr2L 16458803 16458816 chr2L 16459025 16459038 5 222 4.0 1.5 2.8 1.3 235 chr2L 16458803 intergenic not near genes chr2L 16458920 intergenic not near genes chr2L 16459038 intergenic not near genes chr2L_5_16455001 chr2L_16455001 CanS-JC 317 chr2L 16504981 16505014 chr2L 16505117 16505150 5 136 0.0 8.0 4.0 1.0 169 chr2L 16504981 intron Tpr2 + chr2L 16505066 intron Tpr2 + chr2L 16505150 intron Tpr2 + chr2L_5_16505001 chr2L_16505001 CanS-JC 318 chr2L 16507946 16507967 chr2L 16508060 16508081 10 114 0.0 5.5 2.8 2.6 135 chr2L 16507946 intergenic CG5953 -,Tpr2 + chr2L 16508014 intergenic CG5953 -,Tpr2 + chr2L 16508081 3` UTR CG5953 - chr2L_10_16505001 chr2L_16505001 CanS-JC 319 chr2L 16511961 16511981 chr2L 16519114 16519134 HMS-Beagle 4 7153 2.5 2.5 2.5 1.1 7173 chr2L 16511961 intron CG5953 - chr2L 16515548 intron CG5953 - chr2L 16519134 intron CG5953 - chr2L_4_16515001 chr2L_16515001 CanS-JC 320 chr2L 16548482 16548487 chr2L 16548629 16548630 4 146 2.0 0.0 1.0 2.0 148 chr2L 16548482 intron CG42389 + chr2L 16548556 intron CG42389 + chr2L 16548630 intron CG42389 + chr2L_4_16545001 chr2L_16545001 CanS-JC 321 chr2L 16570826 16570861 chr2L 16570928 16570963 9 102 0.0 1.5 0.8 5.0 137 chr2L 16570826 intron CG42389 + chr2L 16570894 intron CG42389 + chr2L 16570963 intron CG42389 + chr2L_9_16570001 chr2L_16570001 CanS-JC 322 chr2L 16573218 16573262 chr2L 16573327 16573371 17 109 10.5 5.5 8.0 1.9 153 chr2L 16573218 intron CG42389 + chr2L 16573294 intron CG42389 + chr2L 16573371 intron CG42389 + chr2L_17_16570001 chr2L_16570001 CanS-JC 323 chr2L 16582688 16582737 chr2L 16583076 16583125 12 388 2.0 5.5 3.8 2.5 437 chr2L 16582688 intron CG42389 + chr2L 16582906 intron CG42389 + chr2L 16583125 intron CG42389 + chr2L_12_16580001 chr2L_16580001 CanS-JC 324 chr2L 16653192 16653194 chr2L 16653585 16653587 4 393 17.0 4.5 10.8 0.3 395 chr2L 16653192 intron CG42389 + chr2L 16653390 intron CG42389 + chr2L 16653587 intron CG42389 + chr2L_4_16650001 chr2L_16650001 CanS-JC 325 chr2L 16696880 16696903 chr2L 16697223 16697246 4 343 2.5 1.5 2.0 1.3 366 chr2L 16696880 intron grp + chr2L 16697063 intron grp + chr2L 16697246 intron grp + chr2L_4_16695001 chr2L_16695001 CanS-JC 326 chr2L 16709055 16709104 chr2L 16709165 16709214 12 110 3.5 4.0 3.8 2.5 159 chr2L 16709055 intron CG31808 - chr2L 16709134 intron CG31808 - chr2L 16709214 intron CG31808 - chr2L_12_16705001 chr2L_16705001 CanS-JC 327 chr2L 16716921 16716981 chr2L 16717064 16717124 16 142 4.5 2.0 3.2 3.8 203 chr2L 16716921 intron Cyt-c-d + chr2L 16717022 intron Cyt-c-d + chr2L 16717124 intron Cyt-c-d + chr2L_16_16715001 chr2L_16715001 CanS-JC 328 chr2L 16764945 16764992 chr2L 16765051 16765098 7 106 6.0 2.5 4.2 1.3 153 chr2L 16764945 intergenic not near genes chr2L 16765022 intergenic not near genes chr2L 16765098 intergenic not near genes chr2L_7_16765001 chr2L_16765001 CanS-JC 329 chr2L 16870096 16870142 chr2L 16870521 16870567 16 425 3.5 5.5 4.5 2.9 471 chr2L 16870096 5` UTR CR31781 + chr2L 16870332 5` UTR CR31781 + chr2L 16870567 5` UTR CR31781 + chr2L_16_16870001 chr2L_16870001 CanS-JC 330 chr2L 16939536 16939568 chr2L 16939700 16939731 14 163 6.0 3.0 4.5 2.5 195 chr2L 16939536 intergenic not near genes chr2L 16939634 intergenic not near genes chr2L 16939731 intergenic not near genes chr2L_14_16935001 chr2L_16935001 CanS-JC 331 chr2L 16958083 16958133 chr2L 16962897 16962947 Doc 16 4814 1.0 6.0 3.5 3.6 4864 chr2L 16958083 intergenic not near genes chr2L 16960515 intergenic not near genes chr2L 16962947 intergenic not near genes chr2L_16_16960001 chr2L_16960001 CanS-JC 332 chr2L 17000098 17000148 chr2L 17000246 17000296 10 148 2.5 5.0 3.8 2.1 198 chr2L 17000098 intergenic not near genes chr2L 17000197 intergenic not near genes chr2L 17000296 intergenic not near genes chr2L_10_17000001 chr2L_17000001 CanS-JC 333 chr2L 17050009 17050029 chr2L 17050122 17050142 7 113 4.0 3.5 3.8 1.5 133 chr2L 17050009 intergenic not near genes chr2L 17050076 intergenic not near genes chr2L 17050142 intergenic not near genes chr2L_7_17050001 chr2L_17050001 CanS-JC 334 chr2L 17050037 17050049 chr2L 17050121 17050162 6 108 4.0 3.5 3.8 1.2 125 chr2L 17050037 intergenic not near genes chr2L 17050100 intergenic not near genes chr2L 17050162 intergenic not near genes chr2L_6_17050001 chr2L_17050001 CanS-JC 335 chr2L 17052390 17052441 chr2L 17052528 17052579 4 138 0.5 0.5 0.5 2.7 189 chr2L 17052390 intergenic not near genes chr2L 17052484 intergenic not near genes chr2L 17052579 intergenic not near genes chr2L_4_17050001 chr2L_17050001 CanS-JC 336 chr2L 17053253 17053310 chr2L 17053689 17053746 12 436 4.5 2.0 3.2 2.9 493 chr2L 17053253 intergenic not near genes chr2L 17053500 intergenic not near genes chr2L 17053746 intergenic not near genes chr2L_12_17050001 chr2L_17050001 CanS-JC 337 chr2L 17102981 17103037 chr2L 17103095 17103151 15 114 2.5 2.0 2.2 4.7 170 chr2L 17102981 intergenic not near genes chr2L 17103066 intergenic not near genes chr2L 17103151 intergenic not near genes chr2L_15_17100001 chr2L_17100001 CanS-JC 338 chr2L 17158702 17158755 chr2L 17158831 17158884 12 129 2.0 0.5 1.2 5.5 182 chr2L 17158702 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158793 intron,intron CG34106 +,beat-IIIa + chr2L 17158884 intron,intron CG34106 +,beat-IIIa + chr2L_12_17155001 chr2L_17155001 CanS-JC 339 chr2L 17167546 17167592 chr2L 17167813 17167859 pogo 9 267 3.5 4.0 3.8 1.9 313 chr2L 17167546 intron,intron CG34106 +,beat-IIIa + chr2L 17167702 intron,intron CG34106 +,beat-IIIa + chr2L 17167859 intron,intron CG34106 +,beat-IIIa + chr2L_9_17165001 chr2L_17165001 CanS-JC 340 chr2L 17199149 17199180 chr2L 17200642 17200673 hobo 4 1493 6.5 5.0 5.8 0.6 1524 chr2L 17199149 intron beat-IIIc - chr2L 17199911 intron beat-IIIc - chr2L 17200673 intron beat-IIIc - chr2L_4_17195001 chr2L_17195001 CanS-JC 341 chr2L 17273170 17273220 chr2L 17277979 17278029 F-element 20 4808 4.0 3.0 3.5 4.4 4859 chr2L 17273170 intergenic not near genes chr2L 17275600 intergenic not near genes chr2L 17278029 intergenic not near genes chr2L_20_17275001 chr2L_17275001 CanS-JC 342 chr2L 17303415 17303462 chr2L 17303619 17303666 11 203 3.0 2.0 2.5 3.1 251 chr2L 17303415 intergenic not near genes chr2L 17303540 intergenic not near genes chr2L 17303666 intergenic not near genes chr2L_11_17300001 chr2L_17300001 CanS-JC 343 chr2L 17327888 17327925 chr2L 17328000 17328037 11 112 6.0 6.0 6.0 1.6 149 chr2L 17327888 intergenic not near genes chr2L 17327962 intergenic not near genes chr2L 17328037 intergenic not near genes chr2L_11_17325001 chr2L_17325001 CanS-JC 344 chr2L 17328452 17328492 chr2L 17328578 17328618 10 125 0.0 3.0 1.5 4.0 166 chr2L 17328452 intergenic not near genes chr2L 17328535 intergenic not near genes chr2L 17328618 intergenic not near genes chr2L_10_17325001 chr2L_17325001 CanS-JC 345 chr2L 17378651 17378711 chr2L 17378871 17378931 17 219 2.0 3.5 2.8 4.5 280 chr2L 17378651 intron Lrch - chr2L 17378791 intron Lrch - chr2L 17378931 intron Lrch - chr2L_17_17375001 chr2L_17375001 CanS-JC 346 chr2L 17385988 17386036 chr2L 17386095 17386143 20 107 5.5 2.5 4.0 4.0 155 chr2L 17385988 intron CLIP-190 + chr2L 17386066 intron CLIP-190 + chr2L 17386143 intron CLIP-190 + chr2L_20_17385001 chr2L_17385001 CanS-JC 347 chr2L 17397994 17398027 chr2L 17398110 17398143 10 116 0.0 8.5 4.2 1.9 149 chr2L 17397994 intron CLIP-190 + chr2L 17398068 intron CLIP-190 + chr2L 17398143 intron CLIP-190 + chr2L_10_17395001 chr2L_17395001 CanS-JC 348 chr2L 17399311 17399350 chr2L 17399426 17399478 10 127 4.5 0.0 2.2 3.1 167 chr2L 17399311 intron CLIP-190 + chr2L 17399394 intron CLIP-190 + chr2L 17399478 intron CLIP-190 + chr2L_10_17395001 chr2L_17395001 CanS-JC 349 chr2L 17425747 17425796 chr2L 17425900 17425949 11 153 4.0 4.5 4.2 2.1 202 chr2L 17425747 intron Dif - chr2L 17425848 intron Dif - chr2L 17425949 intron Dif - chr2L_11_17425001 chr2L_17425001 CanS-JC 350 chr2L 17517830 17517879 chr2L 17517939 17517988 21 109 7.0 4.5 5.8 3.1 158 chr2L 17517830 intron Dhc36C + chr2L 17517909 intron Dhc36C + chr2L 17517988 intron Dhc36C + chr2L_21_17515001 chr2L_17515001 CanS-JC 351 chr2L 17529875 17529920 chr2L 17529986 17530031 9 111 5.0 4.5 4.8 1.6 156 chr2L 17529875 exon CG15145 - chr2L 17529953 exon CG15145 - chr2L 17530031 exon CG15145 - chr2L_9_17525001 chr2L_17525001 CanS-JC 352 chr2L 17572097 17572150 chr2L 17572232 17572285 8 135 1.0 7.5 4.2 1.5 188 chr2L 17572097 intergenic not near genes chr2L 17572191 intergenic not near genes chr2L 17572285 intergenic not near genes chr2L_8_17570001 chr2L_17570001 CanS-JC 353 chr2L 17573231 17573285 chr2L 17573350 17573404 12 119 4.0 5.5 4.8 2.1 173 chr2L 17573231 intergenic not near genes chr2L 17573318 intergenic not near genes chr2L 17573404 intergenic not near genes chr2L_12_17570001 chr2L_17570001 CanS-JC 354 chr2L 17623653 17623697 chr2L 17623909 17623953 7 256 4.5 3.5 4.0 1.4 300 chr2L 17623653 intergenic not near genes chr2L 17623803 intergenic not near genes chr2L 17623953 intergenic not near genes chr2L_7_17620001 chr2L_17620001 CanS-JC 355 chr2L 17640751 17640801 chr2L 17640852 17640909 14 107 4.5 2.0 3.2 3.3 158 chr2L 17640751 intergenic not near genes chr2L 17640830 intergenic not near genes chr2L 17640909 intergenic not near genes chr2L_14_17640001 chr2L_17640001 CanS-JC 356 chr2L 17687492 17687522 chr2L 17692263 17692293 F-element 12 4771 2.0 4.0 3.0 3.0 4801 chr2L 17687492 intron CadN - chr2L 17689892 intron CadN - chr2L 17692293 intron CadN - chr2L_12_17685001 chr2L_17685001 CanS-JC 357 chr2L 17723764 17723794 chr2L 17723883 17723913 11 119 2.5 0.5 1.5 4.4 149 chr2L 17723764 intron CadN - chr2L 17723838 intron CadN - chr2L 17723913 intron CadN - chr2L_11_17720001 chr2L_17720001 CanS-JC 358 chr2L 17727845 17727870 chr2L 17729338 17729363 hobo 6 1493 7.5 9.0 8.2 0.7 1518 chr2L 17727845 intron CadN - chr2L 17728604 intron CadN - chr2L 17729363 intron CadN - chr2L_6_17725001 chr2L_17725001 CanS-JC 359 chr2L 17784621 17784673 chr2L 17784745 17784797 6 124 1.5 3.0 2.2 1.9 176 chr2L 17784621 intergenic not near genes chr2L 17784709 intergenic not near genes chr2L 17784797 intergenic not near genes chr2L_6_17780001 chr2L_17780001 CanS-JC 360 chr2L 17819898 17819950 chr2L 17825127 17825179 copia 15 5229 1.0 3.5 2.2 4.7 5281 chr2L 17819898 intron CadN2 - chr2L 17822538 intron CadN2 - chr2L 17825179 intron CadN2 - chr2L_15_17820001 chr2L_17820001 CanS-JC 361 chr2L 17859587 17859638 chr2L 17859699 17859750 11 112 3.5 7.0 5.2 1.8 163 chr2L 17859587 intron CadN2 - chr2L 17859668 intron CadN2 - chr2L 17859750 intron CadN2 - chr2L_11_17855001 chr2L_17855001 CanS-JC 362 chr2L 17879978 17880029 chr2L 17880091 17880142 19 113 4.5 2.5 3.5 4.2 164 chr2L 17879978 intergenic not near genes chr2L 17880060 intergenic not near genes chr2L 17880142 intergenic not near genes chr2L_19_17880001 chr2L_17880001 CanS-JC 363 chr2L 17931363 17931410 chr2L 17931564 17931611 9 201 4.5 3.0 3.8 1.9 248 chr2L 17931363 intergenic not near genes chr2L 17931487 intergenic not near genes chr2L 17931611 intergenic not near genes chr2L_9_17930001 chr2L_17930001 CanS-JC 364 chr2L 17951927 17951978 chr2L 17953420 17953471 hobo 16 1493 6.0 9.0 7.5 1.9 1544 chr2L 17951927 intergenic CR44398 -,CR44397 - chr2L 17952699 intergenic not near genes chr2L 17953471 intergenic not near genes chr2L_16_17950001 chr2L_17950001 CanS-JC 365 chr2L 17989972 17990000 chr2L 17990074 17990101 23 101 10.5 7.0 8.8 2.3 129 chr2L 17989972 intergenic Prosbeta5R2 + chr2L 17990036 intergenic Prosbeta5R2 + chr2L 17990101 intergenic Prosbeta5R2 + chr2L_23_17990001 chr2L_17990001 CanS-JC 366 chr2L 17990001 17990021 chr2L 17990066 17990123 10 97 7.0 3.5 5.2 1.6 122 chr2L 17990001 intergenic Prosbeta5R2 + chr2L 17990062 intergenic Prosbeta5R2 + chr2L 17990123 intergenic Prosbeta5R2 + chr2L_10_17990001 chr2L_17990001 CanS-JC 367 chr2L 17986755 17986810 chr2L 17991457 17991512 19 4702 35.0 28.0 31.5 0.6 4757 chr2L 17986755 exon CG5681 + chr2L 17989134 intergenic not near genes chr2L 17991512 3` UTR Prosbeta5R2 + chr2L_19_17985001 chr2L_17985001 CanS-JC 368 chr2L 18026958 18027006 chr2L 18027324 18027372 20 366 5.0 1.0 3.0 5.0 414 chr2L 18026958 5` UTR rdo + chr2L 18027165 intron rdo + chr2L 18027372 intron rdo + chr2L_20_18025001 chr2L_18025001 CanS-JC 369 chr2L 18040727 18040757 chr2L 18040840 18040872 10 115 0.0 6.0 3.0 2.5 145 chr2L 18040727 intron rdo + chr2L 18040800 intron rdo + chr2L 18040872 intron rdo + chr2L_10_18040001 chr2L_18040001 CanS-JC 370 chr2L 18041419 18041464 chr2L 18041714 18041759 13 295 1.5 3.5 2.5 3.7 340 chr2L 18041419 intron rdo + chr2L 18041589 intron rdo + chr2L 18041759 intron rdo + chr2L_13_18040001 chr2L_18040001 CanS-JC 371 chr2L 18047010 18047058 chr2L 18047118 18047166 4 108 6.0 6.5 6.2 0.6 156 chr2L 18047010 intron rdo + chr2L 18047088 intron rdo + chr2L 18047166 intron rdo + chr2L_4_18045001 chr2L_18045001 CanS-JC 372 chr2L 18051854 18051904 chr2L 18061027 18061074 roo 7 9173 6.5 6.5 6.5 0.9 9220 chr2L 18051854 intron rdo + chr2L 18056464 intron rdo + chr2L 18061074 intron rdo + chr2L_7_18055001 chr2L_18055001 CanS-JC 373 chr2L 18066359 18066382 chr2L 18066464 18066487 6 105 1.5 3.0 2.2 1.9 128 chr2L 18066359 intron rdo + chr2L 18066423 intron rdo + chr2L 18066487 intron rdo + chr2L_6_18065001 chr2L_18065001 CanS-JC 374 chr2L 18106007 18106049 chr2L 18106155 18106197 10 148 5.0 5.0 5.0 1.7 190 chr2L 18106007 intergenic not near genes chr2L 18106102 intergenic not near genes chr2L 18106197 intergenic not near genes chr2L_10_18105001 chr2L_18105001 CanS-JC 375 chr2L 18110084 18110091 chr2L 18110210 18110217 4 126 7.0 5.5 6.2 0.6 133 chr2L 18110084 intergenic not near genes chr2L 18110150 intergenic not near genes chr2L 18110217 intergenic not near genes chr2L_4_18110001 chr2L_18110001 CanS-JC 376 chr2L 18154302 18154347 chr2L 18154405 18154460 15 112 4.5 5.0 4.8 2.6 158 chr2L 18154302 exon CG17681 + chr2L 18154381 exon CG17681 + chr2L 18154460 3` UTR CG17681 + chr2L_15_18150001 chr2L_18150001 CanS-JC 377 chr2L 18184984 18185024 chr2L 18185124 18185165 4 141 2.0 3.0 2.5 1.1 181 chr2L 18184984 intron,5` UTR CG42750 -,CG7180 - chr2L 18185074 intron CG42750 - chr2L 18185165 intron,3` UTR CG42750 -,CR44900 - chr2L_4_18185001 chr2L_18185001 CanS-JC 378 chr2L 18257107 18257154 chr2L 18257213 18257260 15 106 2.5 6.0 4.2 2.9 153 chr2L 18257107 intron,5` UTR CG42750 -,CR43408 + chr2L 18257184 intron CG42750 - chr2L 18257260 intron CG42750 - chr2L_15_18255001 chr2L_18255001 CanS-JC 379 chr2L 18298911 18298959 chr2L 18299014 18299062 21 101 5.5 6.0 5.8 3.1 151 chr2L 18298911 intergenic not near genes chr2L 18298986 intergenic not near genes chr2L 18299062 intergenic not near genes chr2L_21_18295001 chr2L_18295001 CanS-JC 380 chr2L 18309960 18309972 chr2L 18310078 18310090 4 118 5.5 9.5 7.5 0.5 130 chr2L 18309960 5` UTR CR44694 + chr2L 18310025 intergenic CR44694 +,CR44695 + chr2L 18310090 intergenic CR44695 +,CR44694 + chr2L_4_18310001 chr2L_18310001 CanS-JC 381 chr2L 18364240 18364292 chr2L 18364366 18364418 12 126 4.0 3.0 3.5 2.7 178 chr2L 18364240 intron Fas3 + chr2L 18364329 intron Fas3 + chr2L 18364418 intron Fas3 + chr2L_12_18360001 chr2L_18360001 CanS-JC 382 chr2L 18370764 18370807 chr2L 18370951 18370994 9 185 5.0 6.5 5.8 1.3 230 chr2L 18370764 intron Fas3 + chr2L 18370879 intron Fas3 + chr2L 18370994 intron Fas3 + chr2L_9_18370001 chr2L_18370001 CanS-JC 383 chr2L 18408009 18408050 chr2L 18412819 18412860 Doc 13 4810 4.5 4.5 4.5 2.4 4851 chr2L 18408009 intergenic not near genes chr2L 18410434 intergenic not near genes chr2L 18412860 intergenic not near genes chr2L_13_18410001 chr2L_18410001 CanS-JC 384 chr2L 18442074 18442126 chr2L 18442232 18442284 16 158 4.0 6.0 5.0 2.7 210 chr2L 18442074 3` UTR RpS26 - chr2L 18442179 3` UTR RpS26 - chr2L 18442284 3` UTR RpS26 - chr2L_16_18440001 chr2L_18440001 CanS-JC 385 chr2L 18811393 18811430 chr2L 18811501 18811538 5 108 4.0 0.5 2.2 1.6 145 chr2L 18811393 intergenic CG10570 -,CG42502 - chr2L 18811466 intergenic CG10570 -,CG42502 - chr2L 18811538 intergenic not near genes chr2L_5_18810001 chr2L_18810001 CanS-JC 386 chr2L 18812533 18812587 chr2L 18812822 18812876 13 289 1.0 3.0 2.0 4.3 343 chr2L 18812533 intergenic CG17325 +,CG42305 + chr2L 18812704 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812876 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_13_18810001 chr2L_18810001 CanS-JC 387 chr2L 18898378 18898425 chr2L 18898486 18898533 15 108 7.0 0.0 3.5 3.3 155 chr2L 18898378 intergenic not near genes chr2L 18898456 intergenic not near genes chr2L 18898533 intergenic not near genes chr2L_15_18895001 chr2L_18895001 CanS-JC 388 chr2L 18983333 18983385 chr2L 18983456 18983508 8 123 2.0 2.0 2.0 2.7 175 chr2L 18983333 intron Swip-1 - chr2L 18983420 intron Swip-1 - chr2L 18983508 intron Swip-1 - chr2L_8_18980001 chr2L_18980001 CanS-JC 389 chr2L 19077271 19077323 chr2L 19078738 19078789 11 1467 3.5 1.5 2.5 3.1 1518 chr2L 19077271 intergenic CG10700 - chr2L 19078030 exon CG10700 - chr2L 19078789 exon CG10700 - chr2L_11_19075001 chr2L_19075001 CanS-JC 390 chr2L 19121021 19121062 chr2L 19121125 19121166 12 104 5.0 2.5 3.8 2.5 145 chr2L 19121021 intergenic l(2)37Cc - chr2L 19121094 intergenic l(2)37Cc - chr2L 19121166 intergenic l(2)37Cc - chr2L_12_19120001 chr2L_19120001 CanS-JC 391 chr2L 19121527 19121566 chr2L 19121634 19121673 12 107 3.0 5.5 4.2 2.3 146 chr2L 19121527 3` UTR l(2)37Cc - chr2L 19121600 3` UTR l(2)37Cc - chr2L 19121673 3` UTR l(2)37Cc - chr2L_12_19120001 chr2L_19120001 CanS-JC 392 chr2L 19145159 19145192 chr2L 19145270 19145297 5 110 6.0 8.0 7.0 0.6 138 chr2L 19145159 intron brat + chr2L 19145228 intron brat + chr2L 19145297 intron brat + chr2L_5_19145001 chr2L_19145001 CanS-JC 393 chr2L 19147243 19147260 chr2L 19147384 19147401 5 141 8.5 0.0 4.2 1.0 158 chr2L 19147243 intron brat + chr2L 19147322 intron brat + chr2L 19147401 intron brat + chr2L_5_19145001 chr2L_19145001 CanS-JC 394 chr2L 19147286 19147392 chr2L 19154409 19154453 297 9 7102 0.0 8.5 4.2 1.7 7167 chr2L 19147286 intron brat + chr2L 19150870 intron brat + chr2L 19154453 intron brat + chr2L_9_19150001 chr2L_19150001 CanS-JC 395 chr2L 19189960 19189972 chr2L 19190125 19190152 5 177 4.5 5.5 5.0 0.8 192 chr2L 19189960 intergenic pigeon +,drl + chr2L 19190056 intergenic pigeon +,drl + chr2L 19190152 intergenic drl +,pigeon + chr2L_5_19190001 chr2L_19190001 CanS-JC 396 chr2L 19246799 19246847 chr2L 19246906 19246954 17 107 4.0 3.0 3.5 3.8 155 chr2L 19246799 intergenic not near genes chr2L 19246876 intergenic not near genes chr2L 19246954 intergenic not near genes chr2L_17_19245001 chr2L_19245001 CanS-JC 397 chr2L 19337540 19337596 chr2L 19338133 19338189 24 593 4.5 4.5 4.5 4.4 649 chr2L 19337540 intergenic not near genes chr2L 19337864 intergenic not near genes chr2L 19338189 intergenic dnt - chr2L_24_19335001 chr2L_19335001 CanS-JC 398 chr2L 19345018 19345039 chr2L 19357253 19357274 blood 9 12235 4.5 11.5 8.0 1.0 12256 chr2L 19345018 intron dnt - chr2L 19351146 intron dnt - chr2L 19357274 intron dnt - chr2L_9_19350001 chr2L_19350001 CanS-JC 399 chr2L 19357521 19357562 chr2L 19357637 19357678 7 116 2.5 7.0 4.8 1.2 157 chr2L 19357521 intron dnt - chr2L 19357600 intron dnt - chr2L 19357678 intron dnt - chr2L_7_19355001 chr2L_19355001 CanS-JC 400 chr2L 19378320 19378359 chr2L 19378429 19378468 7 109 8.5 9.0 8.8 0.7 148 chr2L 19378320 intergenic not near genes chr2L 19378394 intergenic not near genes chr2L 19378468 intergenic not near genes chr2L_7_19375001 chr2L_19375001 CanS-JC 401 chr2L 19380493 19380526 chr2L 19380599 19380632 13 105 1.5 3.0 2.2 4.1 139 chr2L 19380493 intergenic CG17350 + chr2L 19380562 intergenic CG17350 + chr2L 19380632 intergenic CG17350 + chr2L_13_19380001 chr2L_19380001 CanS-JC 402 chr2L 19405595 19405628 chr2L 19405711 19405744 13 116 2.5 2.0 2.2 4.1 149 chr2L 19405595 intron Pax - chr2L 19405670 intron Pax - chr2L 19405744 intron Pax - chr2L_13_19405001 chr2L_19405001 CanS-JC 403 chr2L 19407691 19407740 chr2L 19407914 19407963 15 223 4.5 4.0 4.2 2.9 272 chr2L 19407691 intron Pax - chr2L 19407827 intron Pax - chr2L 19407963 intron Pax - chr2L_15_19405001 chr2L_19405001 CanS-JC 404 chr2L 19437504 19437532 chr2L 19437622 19437650 8 118 5.0 2.5 3.8 1.7 146 chr2L 19437504 intron CG10237 - chr2L 19437577 intron CG10237 - chr2L 19437650 intron CG10237 - chr2L_8_19435001 chr2L_19435001 CanS-JC 405 chr2L 19478522 19478570 chr2L 19478642 19478690 20 120 4.5 6.0 5.2 3.2 168 chr2L 19478522 intergenic not near genes chr2L 19478606 intergenic not near genes chr2L 19478690 intergenic not near genes chr2L_20_19475001 chr2L_19475001 CanS-JC 406 chr2L 19544572 19544618 chr2L 19544675 19544721 16 102 8.0 5.0 6.5 2.1 149 chr2L 19544572 exon ref(2)P + chr2L 19544646 exon ref(2)P + chr2L 19544721 exon ref(2)P + chr2L_16_19540001 chr2L_19540001 CanS-JC 407 chr2L 19557801 19557984 chr2L 19557919 19558090 9 116 0.5 0.5 0.5 6.0 289 chr2L 19557801 intergenic Tep5 + chr2L 19557946 intergenic Tep5 + chr2L 19558090 exon Tep5 + chr2L_9_19555001 chr2L_19555001 CanS-JC 408 chr2L 19558494 19558545 chr2L 19558624 19558675 17 130 0.5 3.0 1.8 6.1 181 chr2L 19558494 intron Tep5 + chr2L 19558584 intron Tep5 + chr2L 19558675 intron Tep5 + chr2L_17_19555001 chr2L_19555001 CanS-JC 409 chr2L 19559978 19560028 chr2L 19560257 19560306 12 279 3.0 3.0 3.0 3.0 328 chr2L 19559978 exon Tep5 + chr2L 19560142 exon Tep5 + chr2L 19560306 intron Tep5 + chr2L_12_19560001 chr2L_19560001 CanS-JC 410 chr2L 19560818 19560844 chr2L 19560924 19560950 5 106 6.5 0.0 3.2 1.2 132 chr2L 19560818 exon Tep5 + chr2L 19560884 exon Tep5 + chr2L 19560950 exon Tep5 + chr2L_5_19560001 chr2L_19560001 CanS-JC 411 chr2L 19561315 19561368 chr2L 19561484 19561535 17 167 3.5 3.5 3.5 3.8 220 chr2L 19561315 exon Tep5 + chr2L 19561425 exon Tep5 + chr2L 19561535 exon Tep5 + chr2L_17_19560001 chr2L_19560001 CanS-JC 412 chr2L 19620070 19620127 chr2L 19621085 19621142 jockey 12 1015 6.0 8.5 7.2 1.5 1072 chr2L 19620070 intron Lar + chr2L 19620606 intron Lar + chr2L 19621142 intron Lar + chr2L_12_19620001 chr2L_19620001 CanS-JC 413 chr2L 19652556 19652599 chr2L 19674018 19674061 opus 14 21461 4.0 6.5 5.2 2.3 21505 chr2L 19652556 intron Lar + chr2L 19663308 intron Lar + chr2L 19674061 intron Lar + chr2L_14_19660001 chr2L_19660001 CanS-JC 414 chr2L 19703521 19703562 chr2L 19712677 19712724 roo 18 9162 6.0 5.5 5.8 2.6 9203 chr2L 19703521 intron Lar + chr2L 19708122 intron Lar + chr2L 19712724 intron Lar + chr2L_18_19705001 chr2L_19705001 CanS-JC 415 chr2L 19762790 19762834 chr2L 19763058 19763102 pogo 9 268 3.5 4.0 3.8 1.9 312 chr2L 19762790 5` UTR fbp - chr2L 19762946 intron fbp - chr2L 19763102 intron fbp - chr2L_9_19760001 chr2L_19760001 CanS-JC 416 chr2L 19773146 19773185 chr2L 19773259 19773289 12 112 3.0 3.5 3.2 2.9 143 chr2L 19773146 intergenic not near genes chr2L 19773218 intergenic not near genes chr2L 19773289 intergenic not near genes chr2L_12_19770001 chr2L_19770001 CanS-JC 417 chr2L 19776643 19776659 chr2L 19776749 19776765 5 106 13.0 8.0 10.5 0.4 122 chr2L 19776643 3` UTR CdGAPr - chr2L 19776704 3` UTR CdGAPr - chr2L 19776765 3` UTR CdGAPr - chr2L_5_19775001 chr2L_19775001 CanS-JC 418 chr2L 19823262 19823298 chr2L 19823379 19823415 10 116 5.5 2.0 3.8 2.1 153 chr2L 19823262 intron sick + chr2L 19823338 intron sick + chr2L 19823415 intron sick + chr2L_10_19820001 chr2L_19820001 CanS-JC 419 chr2L 19911271 19911320 chr2L 19911385 19911434 17 114 3.5 1.5 2.5 4.9 163 chr2L 19911271 intron,3` UTR sick +,CR43097 - chr2L 19911352 intron,3` UTR sick +,CR43097 - chr2L 19911434 intron,3` UTR sick +,CR43097 - chr2L_17_19910001 chr2L_19910001 CanS-JC 420 chr2L 19913039 19913082 chr2L 19913511 19913554 11 472 2.5 0.0 1.2 5.0 515 chr2L 19913039 intron,3` UTR sick +,Victoria - chr2L 19913296 intron,exon sick +,Victoria - chr2L 19913554 intron sick + chr2L_11_19910001 chr2L_19910001 CanS-JC 421 chr2L 19950183 19950200 chr2L 19950291 19950308 8 108 3.5 1.5 2.5 2.3 125 chr2L 19950183 intron sick + chr2L 19950246 intron sick + chr2L 19950308 intron sick + chr2L_8_19950001 chr2L_19950001 CanS-JC 422 chr2L 20005847 20005901 chr2L 20010949 20011003 flea 17 5102 6.5 5.0 5.8 2.5 5156 chr2L 20005847 intron CG43861 - chr2L 20008425 intron CG43861 - chr2L 20011003 intron CG43861 - chr2L_17_20005001 chr2L_20005001 CanS-JC 423 chr2L 20041404 20041459 chr2L 20041515 20041570 16 111 2.5 6.0 4.2 3.1 166 chr2L 20041404 intron sNPF + chr2L 20041487 intron sNPF + chr2L 20041570 intron sNPF + chr2L_16_20040001 chr2L_20040001 CanS-JC 424 chr2L 20079499 20079539 chr2L 20079646 20079686 9 146 5.5 4.0 4.8 1.6 187 chr2L 20079499 intron,intron neb +,fok - chr2L 20079592 intron,intron neb +,fok - chr2L 20079686 intron,intron neb +,fok - chr2L_9_20075001 chr2L_20075001 CanS-JC 425 chr2L 20272088 20272136 chr2L 20282825 20282873 copia 10 10737 8.0 7.0 7.5 1.2 10785 chr2L 20272088 intergenic not near genes chr2L 20277480 intergenic not near genes chr2L 20282873 intergenic not near genes chr2L_10_20275001 chr2L_20275001 CanS-JC 426 chr2L 20294275 20294320 chr2L 20294390 20294435 10 115 2.5 5.5 4.0 2.0 160 chr2L 20294275 intergenic CG12617 + chr2L 20294355 intergenic CG12617 + chr2L 20294435 intergenic CG12617 + chr2L_10_20290001 chr2L_20290001 CanS-JC 427 chr2L 20296483 20296541 chr2L 20296590 20296648 7 107 3.5 5.5 4.5 1.3 165 chr2L 20296483 intergenic CR43414 - chr2L 20296566 intergenic CR43414 - chr2L 20296648 3` UTR CR43414 - chr2L_7_20295001 chr2L_20295001 CanS-JC 428 chr2L 20299978 20300017 chr2L 20300092 20300131 7 113 8.0 6.0 7.0 0.9 153 chr2L 20299978 intergenic not near genes chr2L 20300054 intergenic not near genes chr2L 20300131 intergenic not near genes chr2L_7_20300001 chr2L_20300001 CanS-JC 429 chr2L 20303161 20303183 chr2L 20310655 20310677 blood 4 7494 3.5 6.5 5.0 0.7 7516 chr2L 20303161 intergenic not near genes chr2L 20306919 intergenic not near genes chr2L 20310677 intergenic not near genes chr2L_4_20305001 chr2L_20305001 CanS-JC 430 chr2L 20320016 20320058 chr2L 20320146 20320203 6 140 5.0 0.0 2.5 1.7 187 chr2L 20320016 intron spir + chr2L 20320110 intron spir + chr2L 20320203 intron spir + chr2L_6_20320001 chr2L_20320001 CanS-JC 431 chr2L 20372202 20372225 chr2L 20372469 20372492 pogo 6 267 2.5 8.0 5.2 1.0 290 chr2L 20372202 intergenic Ugt37a1 - chr2L 20372347 intergenic Ugt37a1 - chr2L 20372492 exon Ugt37a1 - chr2L_6_20370001 chr2L_20370001 CanS-JC 432 chr2L 20498667 20498708 chr2L 20498792 20498833 17 123 4.0 4.0 4.0 3.4 166 chr2L 20498667 intergenic not near genes chr2L 20498750 intergenic not near genes chr2L 20498833 intergenic not near genes chr2L_17_20495001 chr2L_20495001 CanS-JC 433 chr2L 20568634 20568687 chr2L 20569050 20569103 X-element 10 416 3.0 2.0 2.5 2.9 469 chr2L 20568634 intron CR45347 + chr2L 20568868 intron CR45347 + chr2L 20569103 intron CR45347 + chr2L_10_20565001 chr2L_20565001 CanS-JC 434 chr2L 20576193 20576246 chr2L 20583687 20583739 blood 19 7494 5.0 3.0 4.0 3.8 7546 chr2L 20576193 intergenic CR45347 + chr2L 20579966 intergenic not near genes chr2L 20583739 3` UTR CR44909 - chr2L_19_20575001 chr2L_20575001 CanS-JC 435 chr2L 20623893 20623943 chr2L 20623997 20624048 20 105 2.5 1.5 2.0 6.7 155 chr2L 20623893 intron CR44909 - chr2L 20623970 intron CR44909 - chr2L 20624048 intron CR44909 - chr2L_20_20620001 chr2L_20620001 CanS-JC 436 chr2L 20674808 20674863 chr2L 20674919 20674967 8 107 4.5 0.5 2.5 2.3 159 chr2L 20674808 intron CG31678 - chr2L 20674888 intron CG31678 - chr2L 20674967 intron CG31678 - chr2L_8_20670001 chr2L_20670001 CanS-JC 437 chr2L 20711665 20711715 chr2L 20711781 20711831 17 116 3.5 3.5 3.5 3.8 166 chr2L 20711665 intron,5` UTR Hr38 -,CR44188 + chr2L 20711748 intron,5` UTR Hr38 -,CR44188 + chr2L 20711831 intron,5` UTR Hr38 -,CR44188 + chr2L_17_20710001 chr2L_20710001 CanS-JC 438 chr2L 20819100 20819145 chr2L 20819210 20819255 13 110 4.0 3.5 3.8 2.7 155 chr2L 20819100 intergenic not near genes chr2L 20819178 intergenic not near genes chr2L 20819255 intergenic not near genes chr2L_13_20815001 chr2L_20815001 CanS-JC 439 chr2L 20821476 20821516 chr2L 20821650 20821695 9 176 8.0 3.0 5.5 1.4 219 chr2L 20821476 intergenic not near genes chr2L 20821586 intergenic not near genes chr2L 20821695 intergenic not near genes chr2L_9_20820001 chr2L_20820001 CanS-JC 440 chr2L 20840000 20840057 chr2L 20840238 20840295 15 238 2.0 4.5 3.2 3.6 295 chr2L 20840000 intergenic not near genes chr2L 20840148 intergenic not near genes chr2L 20840295 intergenic CG31676 + chr2L_15_20840001 chr2L_20840001 CanS-JC 441 chr2L 20891512 20891541 chr2L 20896639 20896668 jockey 10 5127 5.0 4.0 4.5 1.8 5156 chr2L 20891512 intron,intron CG43739 -,sky - chr2L 20894090 intron,intron CG43739 -,sky - chr2L 20896668 intron,intron CG43739 -,sky - chr2L_10_20890001 chr2L_20890001 CanS-JC 442 chr2L 20901435 20901475 chr2L 20902625 20902665 1360 6 1190 5.5 0.0 2.8 1.6 1230 chr2L 20901435 intron,intron CG43739 -,sky - chr2L 20902050 intron,intron CG43739 -,sky - chr2L 20902665 intron,intron CG43739 -,sky - chr2L_6_20900001 chr2L_20900001 CanS-JC 443 chr2L 20934575 20934630 chr2L 20934796 20934851 15 221 2.5 5.0 3.8 3.1 276 chr2L 20934575 intergenic CG9270 - chr2L 20934713 intergenic not near genes chr2L 20934851 intergenic not near genes chr2L_15_20930001 chr2L_20930001 CanS-JC 444 chr2L 20946918 20946959 chr2L 20947031 20947072 15 110 2.5 2.5 2.5 4.3 154 chr2L 20946918 intergenic CR44606 - chr2L 20946995 intergenic CR44606 - chr2L 20947072 intergenic CR44606 - chr2L_15_20945001 chr2L_20945001 CanS-JC 445 chr2L 20967058 20967105 chr2L 20967170 20967217 16 112 2.5 3.0 2.8 4.2 159 chr2L 20967058 3` UTR CG42238 - chr2L 20967138 3` UTR CG42238 - chr2L 20967217 3` UTR CG42238 - chr2L_16_20965001 chr2L_20965001 CanS-JC 446 chr2L 20976637 20976658 chr2L 20981478 20981498 X-element 10 4839 8.0 10.5 9.2 1.0 4861 chr2L 20976637 intron CG42238 - chr2L 20979068 intron CG42238 - chr2L 20981498 intron CG42238 - chr2L_10_20975001 chr2L_20975001 CanS-JC 447 chr2L 20984396 20984417 chr2L 20984708 20984729 13 312 0.0 6.0 3.0 3.2 333 chr2L 20984396 intron CG42238 - chr2L 20984562 intron CG42238 - chr2L 20984729 intron CG42238 - chr2L_13_20980001 chr2L_20980001 CanS-JC 448 chr2L 20991013 20991067 chr2L 20991117 20991159 20 103 7.0 4.0 5.5 3.1 146 chr2L 20991013 intron CG42238 - chr2L 20991086 intron CG42238 - chr2L 20991159 intron CG42238 - chr2L_20_20990001 chr2L_20990001 CanS-JC 449 chr2L 21020254 21020300 chr2L 21023957 21024003 NOF 8 3703 4.5 7.5 6.0 1.1 3749 chr2L 21020254 intron CG42238 - chr2L 21022128 intron CG42238 - chr2L 21024003 intron CG42238 - chr2L_8_21020001 chr2L_21020001 CanS-JC 450 chr2L 21041114 21041163 chr2L 21049401 21049450 Tirant 14 8287 3.0 4.5 3.8 2.9 8336 chr2L 21041114 intron CG42238 - chr2L 21045282 intron CG42238 - chr2L 21049450 intron CG42238 - chr2L_14_21045001 chr2L_21045001 CanS-JC 451 chr2L 21074896 21074941 chr2L 21075013 21075058 8 117 2.5 3.0 2.8 2.1 162 chr2L 21074896 intergenic not near genes chr2L 21074977 intergenic tadr + chr2L 21075058 intergenic tadr + chr2L_8_21070001 chr2L_21070001 CanS-JC 452 chr2L 21086417 21086452 chr2L 21086558 21086593 10 141 3.5 4.0 3.8 2.1 176 chr2L 21086417 5` UTR CG33509 - chr2L 21086505 5` UTR CG33509 - chr2L 21086593 intergenic CG33509 -,ppk13 - chr2L_10_21085001 chr2L_21085001 CanS-JC 453 chr2L 21088902 21088931 chr2L 21089010 21089040 12 109 4.0 2.5 3.2 2.9 138 chr2L 21088902 intergenic ppk13 -,CG9259 + chr2L 21088971 intergenic ppk13 -,CG9259 + chr2L 21089040 intergenic ppk13 -,CG9259 + chr2L_12_21085001 chr2L_21085001 CanS-JC 454 chr2L 21179194 21179238 chr2L 21179301 21179345 14 107 2.0 8.5 5.2 2.3 151 chr2L 21179194 intron,5` UTR bur -,CR44911 + chr2L 21179270 intron,5` UTR bur -,CR44911 + chr2L 21179345 5` UTR,5` UTR bur -,CR44911 + chr2L_14_21175001 chr2L_21175001 CanS-JC 455 chr2L 21286581 21286610 chr2L 21286685 21286714 14 104 7.0 3.0 5.0 2.3 133 chr2L 21286581 exon Mio - chr2L 21286648 intron Mio - chr2L 21286714 intron Mio - chr2L_14_21285001 chr2L_21285001 CanS-JC 456 chr2L 21347549 21347574 chr2L 21355046 21355068 blood 10 7496 5.0 2.5 3.8 2.1 7519 chr2L 21347549 intron Tsp39D + chr2L 21351308 intron Tsp39D + chr2L 21355068 intron Tsp39D + chr2L_10_21350001 chr2L_21350001 CanS-JC 457 chr2L 21597036 21597051 chr2L 21604806 21604821 roo 6 7770 0.0 7.0 3.5 1.3 7785 chr2L 21597036 intergenic not near genes chr2L 21600928 intergenic not near genes chr2L 21604821 intergenic not near genes chr2L_6_21600001 chr2L_21600001 CanS-JC 458 chr2L 21627685 21627695 chr2L 21627848 21627857 4 163 31.5 14.0 22.8 0.2 172 chr2L 21627685 exon Df31 - chr2L 21627771 intron Df31 - chr2L 21627857 exon Df31 - chr2L_4_21625001 chr2L_21625001 CanS-JC 459 chr2L 21627698 21627737 chr2L 21627847 21627900 10 158 21.0 14.0 17.5 0.5 202 chr2L 21627698 exon Df31 - chr2L 21627799 intron Df31 - chr2L 21627900 exon Df31 - chr2L_10_21625001 chr2L_21625001 CanS-JC 460 chr2L 21691802 21691833 chr2L 21698298 21698329 Burdock 4 6496 5.0 2.0 3.5 0.9 6527 chr2L 21691802 intron CG31619 + chr2L 21695066 intron CG31619 + chr2L 21698329 intron CG31619 + chr2L_4_21695001 chr2L_21695001 CanS-JC 461 chr2L 21754640 21754687 chr2L 21754747 21754794 5 107 3.0 4.5 3.8 1.0 154 chr2L 21754640 intron step - chr2L 21754717 intron step - chr2L 21754794 intron step - chr2L_5_21750001 chr2L_21750001 CanS-JC 462 chr2L 21755468 21755522 chr2L 21755618 21755672 18 150 4.5 4.5 4.5 3.3 204 chr2L 21755468 intron step - chr2L 21755570 intron step - chr2L 21755672 intron step - chr2L_18_21755001 chr2L_21755001 CanS-JC 463 chr2L 21757548 21757596 chr2L 21757655 21757703 10 106 7.5 7.0 7.2 1.2 155 chr2L 21757548 intergenic step -,CG1416 + chr2L 21757626 intergenic step -,CG1416 + chr2L 21757703 intergenic step -,CG1416 + chr2L_10_21755001 chr2L_21755001 CanS-JC 464 chr2L 21855453 21855511 chr2L 21855565 21855624 16 112 3.0 0.5 1.8 5.7 171 chr2L 21855453 intron CR44917 + chr2L 21855538 intron CR44917 + chr2L 21855624 intron CR44917 + chr2L_16_21855001 chr2L_21855001 CanS-JC 465 chr2L 21933895 21933920 chr2L 21934002 21934027 18 106 7.0 7.5 7.2 2.2 132 chr2L 21933895 intergenic not near genes chr2L 21933961 intergenic not near genes chr2L 21934027 intergenic not near genes chr2L_18_21930001 chr2L_21930001 CanS-JC 466 chr2L 21981662 21981707 chr2L 21990853 21990898 roo 16 9191 6.5 6.0 6.2 2.2 9236 chr2L 21981662 exon CG2528 - chr2L 21986280 intron CG2528 - chr2L 21990898 exon CG2528 - chr2L_16_21985001 chr2L_21985001 CanS-JC 467 chr2L 22005742 22005793 chr2L 22005858 22005909 14 116 1.5 0.0 0.8 7.8 167 chr2L 22005742 intergenic not near genes chr2L 22005826 intergenic not near genes chr2L 22005909 intergenic not near genes chr2L_14_22005001 chr2L_22005001 CanS-JC 468 chr2L 22037349 22037398 chr2L 22037677 22037726 INE-1 8 328 1.5 2.5 2.0 2.7 377 chr2L 22037349 intergenic not near genes chr2L 22037538 intergenic CG41434 + chr2L 22037726 intergenic CG41434 + chr2L_8_22035001 chr2L_22035001 CanS-JC 469 chr2L 22047235 22047257 chr2L 22047386 22047408 10 151 5.0 7.0 6.0 1.4 173 chr2L 22047235 intergenic not near genes chr2L 22047322 intergenic not near genes chr2L 22047408 intergenic not near genes chr2L_10_22045001 chr2L_22045001 CanS-JC 470 chr2L 22107353 22107372 chr2L 22107506 22107525 11 153 6.5 1.0 3.8 2.3 172 chr2L 22107353 intergenic CG10834 - chr2L 22107439 intergenic CG10834 - chr2L 22107525 intergenic CG10834 - chr2L_11_22105001 chr2L_22105001 CanS-JC 471 chr2L 22305731 22305780 chr2L 22305835 22305884 8 104 1.5 2.5 2.0 2.7 153 chr2L 22305731 intergenic not near genes chr2L 22305808 intergenic not near genes chr2L 22305884 intergenic not near genes chr2L_8_22305001 chr2L_22305001 CanS-JC 472 chr2L 22581945 22582001 chr2L 22583759 22583816 S-element 10 1815 6.5 6.5 6.5 1.3 1871 chr2L 22581945 intron CG17494 + chr2L 22582880 intron CG17494 + chr2L 22583816 intron CG17494 + chr2L_10_22580001 chr2L_22580001 CanS-JC 473 chr2L 22776397 22776443 chr2L 22778211 22778258 S-element 10 1815 6.0 2.0 4.0 2.0 1861 chr2L 22776397 intergenic not near genes chr2L 22777328 intergenic not near genes chr2L 22778258 intergenic not near genes chr2L_10_22775001 chr2L_22775001 CanS-JC 474 chr2L 23168866 23168877 chr2L 23168968 23168979 5 102 6.0 10.0 8.0 0.6 113 chr2L 23168866 intron,5` UTR CG12567 -,mir-2490 + chr2L 23168922 intron CG12567 - chr2L 23168979 intron CG12567 - chr2L_5_23165001 chr2L_23165001 CanS-JC 475 chr2L 23233919 23233925 chr2L 23234024 23234029 4 105 21.5 14.0 17.8 0.2 110 chr2L 23233919 intergenic not near genes chr2L 23233974 intergenic not near genes chr2L 23234029 intergenic not near genes chr2L_4_23230001 chr2L_23230001 CanS-JC 476 chr2R 469944 469972 chr2R 473211 473239 F-element 7 3267 4.0 3.0 3.5 1.6 3295 chr2R 469944 intergenic not near genes chr2R 471592 intergenic not near genes chr2R 473239 intergenic not near genes chr2R_7_470001 chr2R_470001 CanS-JC 477 chr2R 529319 529352 chr2R 537970 538003 Max-element 14 8650 4.0 7.5 5.8 2.1 8684 chr2R 529319 intron CG40378 + chr2R 533661 intron CG40378 + chr2R 538003 intron CG40378 + chr2R_14_530001 chr2R_530001 CanS-JC 478 chr2R 1516582 1516603 chr2R 1521336 1521357 1731 14 4754 25.0 25.5 25.2 0.5 4775 chr2R 1516582 exon Maf1 - chr2R 1518970 intron Maf1 - chr2R 1521357 5` UTR Maf1 - chr2R_14_1515001 chr2R_1515001 CanS-JC 479 chr2R 2498963 2499010 chr2R 2508136 2508183 roo 15 9173 5.5 6.5 6.0 2.1 9220 chr2R 2498963 intron MFS17 - chr2R 2503573 intron MFS17 - chr2R 2508183 intron MFS17 - chr2R_15_2500001 chr2R_2500001 CanS-JC 480 chr2R 2525255 2525298 chr2R 2525980 2526023 7 725 5.0 3.0 4.0 1.4 768 chr2R 2525255 intron MFS17 - chr2R 2525639 intron MFS17 - chr2R 2526023 intron MFS17 - chr2R_7_2525001 chr2R_2525001 CanS-JC 481 chr2R 1373049 1373066 chr2R 2589321 2589341 Cr1a 5 1216273 13.5 14.0 13.8 0.3 1216292 chr2R 1373049 intron l(2)41Ab + chr2R 1981195 intron CG17684 - chr2R 2589341 intergenic not near genes chr2R_5_1980001 chr2R_1980001 CanS-JC 482 chr2R 3144063 3144109 chr2R 3393366 3393413 Doc 5 249304 13.5 12.0 12.8 0.4 249350 chr2R 3144063 intron CG42596 + chr2R 3268738 intergenic not near genes chr2R 3393413 intergenic not near genes chr2R_5_3265001 chr2R_3265001 CanS-JC 483 chr2R 3291828 3292100 chr2R 3915028 3915287 5 623194 18.0 27.0 22.5 0.2 623459 chr2R 3291828 intergenic not near genes chr2R 3603558 intergenic not near genes chr2R 3915287 intron uex - chr2R_5_3600001 chr2R_3600001 CanS-JC 484 chr2R 3293718 3293742 chr2R 3293821 3293846 4 104 4.5 2.0 3.2 1.0 128 chr2R 3293718 intergenic not near genes chr2R 3293782 intergenic not near genes chr2R 3293846 intergenic not near genes chr2R_4_3290001 chr2R_3290001 CanS-JC 485 chr2R 3532596 3532635 chr2R 3536065 3536104 Doc 4 3469 1.5 3.0 2.2 1.2 3508 chr2R 3532596 intergenic not near genes chr2R 3534350 intergenic not near genes chr2R 3536104 intergenic not near genes chr2R_4_3530001 chr2R_3530001 CanS-JC 486 chr2R 4622938 4622978 chr2R 4624123 4624163 1360 7 1185 7.5 10.0 8.8 0.7 1225 chr2R 4622938 intergenic CR44101 - chr2R 4623550 intergenic not near genes chr2R 4624163 intergenic not near genes chr2R_7_4620001 chr2R_4620001 CanS-JC 487 chr2R 4634155 4634184 chr2R 4634260 4634289 10 105 5.5 4.5 5.0 1.7 134 chr2R 4634155 intergenic not near genes chr2R 4634222 intergenic not near genes chr2R 4634289 intergenic not near genes chr2R_10_4630001 chr2R_4630001 CanS-JC 488 chr2R 4656764 4656810 chr2R 4656888 4656940 18 128 24.0 25.5 24.8 0.7 176 chr2R 4656764 intergenic not near genes chr2R 4656852 intergenic not near genes chr2R 4656940 intergenic not near genes chr2R_18_4655001 chr2R_4655001 CanS-JC 489 chr2R 4702471 4702502 chr2R 4702635 4702666 9 163 6.5 6.0 6.2 1.2 195 chr2R 4702471 intron Nipped-B - chr2R 4702568 intron Nipped-B - chr2R 4702666 intron Nipped-B - chr2R_9_4700001 chr2R_4700001 CanS-JC 490 chr2R 5008968 5009020 chr2R 5009303 5009355 13 335 3.5 4.0 3.8 2.7 387 chr2R 5008968 intron Ir41a + chr2R 5009162 intron Ir41a + chr2R 5009355 intron Ir41a + chr2R_13_5005001 chr2R_5005001 CanS-JC 491 chr2R 5075197 5075219 chr2R 5075351 5075373 8 154 10.5 0.0 5.2 1.3 176 chr2R 5075197 intergenic not near genes chr2R 5075285 intergenic not near genes chr2R 5075373 intergenic not near genes chr2R_8_5075001 chr2R_5075001 CanS-JC 492 chr2R 5075242 5075372 chr2R 5075759 5075814 8 489 0.0 4.5 2.2 2.5 572 chr2R 5075242 intergenic not near genes chr2R 5075528 intergenic not near genes chr2R 5075814 intergenic not near genes chr2R_8_5075001 chr2R_5075001 CanS-JC 493 chr2R 5080770 5080818 chr2R 5080882 5080935 12 116 1.5 3.0 2.2 3.8 165 chr2R 5080770 intergenic not near genes chr2R 5080852 intergenic not near genes chr2R 5080935 intergenic not near genes chr2R_12_5080001 chr2R_5080001 CanS-JC 494 chr2R 5125223 5125270 chr2R 5125567 5125614 11 341 2.0 4.0 3.0 2.8 391 chr2R 5125223 intron gus - chr2R 5125418 intron gus - chr2R 5125614 intron gus - chr2R_11_5125001 chr2R_5125001 CanS-JC 495 chr2R 5303468 5303518 chr2R 5303582 5303632 21 114 3.5 3.0 3.2 5.0 164 chr2R 5303468 intergenic not near genes chr2R 5303550 intergenic not near genes chr2R 5303632 intergenic not near genes chr2R_21_5300001 chr2R_5300001 CanS-JC 496 chr2R 5363468 5363516 chr2R 5363572 5363620 8 104 9.0 8.0 8.5 0.8 152 chr2R 5363468 5` UTR CR42646 + chr2R 5363544 intron CR42646 + chr2R 5363620 intron CR42646 + chr2R_8_5360001 chr2R_5360001 CanS-JC 497 chr2R 5417976 5418022 chr2R 5420634 5420680 Burdock 10 2658 10.0 7.0 8.5 1.1 2704 chr2R 5417976 intron laccase2 + chr2R 5419328 intron laccase2 + chr2R 5420680 intron laccase2 + chr2R_10_5415001 chr2R_5415001 CanS-JC 498 chr2R 5472423 5472454 chr2R 5472871 5472902 11 448 3.0 4.5 3.8 2.3 479 chr2R 5472423 intron CG30440 - chr2R 5472662 intron CG30440 - chr2R 5472902 intron CG30440 - chr2R_11_5470001 chr2R_5470001 CanS-JC 499 chr2R 5473340 5473381 chr2R 5473461 5473502 14 120 7.0 1.5 4.2 2.7 162 chr2R 5473340 intron CG30440 - chr2R 5473421 intron CG30440 - chr2R 5473502 intron CG30440 - chr2R_14_5470001 chr2R_5470001 CanS-JC 500 chr2R 5475432 5475472 chr2R 5475722 5475762 9 290 3.5 0.5 2.0 3.0 330 chr2R 5475432 intron CG30440 - chr2R 5475597 intron CG30440 - chr2R 5475762 intron CG30440 - chr2R_9_5475001 chr2R_5475001 CanS-JC 501 chr2R 5476331 5476385 chr2R 5476901 5476955 9 570 1.5 5.0 3.2 2.1 624 chr2R 5476331 intron CG30440 - chr2R 5476643 intron CG30440 - chr2R 5476955 intron CG30440 - chr2R_9_5475001 chr2R_5475001 CanS-JC 502 chr2R 5491690 5491733 chr2R 5491857 5491900 12 166 8.0 6.5 7.2 1.5 210 chr2R 5491690 intron CG30440 - chr2R 5491795 intron CG30440 - chr2R 5491900 intron CG30440 - chr2R_12_5490001 chr2R_5490001 CanS-JC 503 chr2R 5509506 5509544 chr2R 5509620 5509666 11 121 2.0 1.5 1.8 3.9 160 chr2R 5509506 intron CG30438 + chr2R 5509586 intron CG30438 + chr2R 5509666 intron CG30438 + chr2R_11_5505001 chr2R_5505001 CanS-JC 504 chr2R 5543198 5543217 chr2R 5547308 5547327 invader1 7 4110 0.0 7.0 3.5 1.6 4129 chr2R 5543198 intron CG30438 + chr2R 5545262 intron CG30438 + chr2R 5547327 intron CG30438 + chr2R_7_5545001 chr2R_5545001 CanS-JC 505 chr2R 5581399 5581414 chr2R 5627634 5627649 8 46235 4.5 8.0 6.2 1.1 46250 chr2R 5581399 intergenic not near genes chr2R 5604524 intron Fis1 - chr2R 5627649 intergenic not near genes chr2R_8_5600001 chr2R_5600001 CanS-JC 506 chr2R 5772504 5772544 chr2R 5772624 5772664 14 120 1.5 0.5 1.0 7.0 160 chr2R 5772504 3` UTR Gp210 + chr2R 5772584 3` UTR Gp210 + chr2R 5772664 3` UTR Gp210 + chr2R_14_5770001 chr2R_5770001 CanS-JC 507 chr2R 5772818 5772858 chr2R 5772926 5772966 11 108 6.5 4.0 5.2 1.8 148 chr2R 5772818 3` UTR Gp210 + chr2R 5772892 3` UTR Gp210 + chr2R 5772966 3` UTR Gp210 + chr2R_11_5770001 chr2R_5770001 CanS-JC 508 chr2R 5790439 5790467 chr2R 5790550 5790578 13 111 6.5 4.0 5.2 2.1 139 chr2R 5790439 intergenic not near genes chr2R 5790508 intergenic not near genes chr2R 5790578 intergenic not near genes chr2R_13_5790001 chr2R_5790001 CanS-JC 509 chr2R 5812138 5812174 chr2R 5812241 5812277 11 103 7.0 7.5 7.2 1.3 139 chr2R 5812138 intron dpr12 + chr2R 5812208 intron dpr12 + chr2R 5812277 intron dpr12 + chr2R_11_5810001 chr2R_5810001 CanS-JC 510 chr2R 5861265 5861319 chr2R 5861411 5861466 20 147 5.0 4.0 4.5 3.6 201 chr2R 5861265 intergenic dpr12 + chr2R 5861366 intergenic not near genes chr2R 5861466 intergenic not near genes chr2R_20_5860001 chr2R_5860001 CanS-JC 511 chr2R 5869244 5869296 chr2R 5874354 5874406 flea 19 5110 5.0 4.5 4.8 3.3 5162 chr2R 5869244 intergenic not near genes chr2R 5871825 intergenic not near genes chr2R 5874406 intergenic not near genes chr2R_19_5870001 chr2R_5870001 CanS-JC 512 chr2R 5878899 5878954 chr2R 5879005 5879060 12 105 4.0 3.5 3.8 2.5 161 chr2R 5878899 intergenic CG44438 - chr2R 5878980 intergenic CG44438 - chr2R 5879060 intergenic CG44438 - chr2R_12_5875001 chr2R_5875001 CanS-JC 513 chr2R 5885341 5885376 chr2R 5885496 5885531 9 155 3.0 6.0 4.5 1.6 190 chr2R 5885341 5` UTR CR44125 + chr2R 5885436 5` UTR CR44125 + chr2R 5885531 5` UTR CR44125 + chr2R_9_5885001 chr2R_5885001 CanS-JC 514 chr2R 5902146 5902183 chr2R 5909731 5909768 17.6 5 7585 6.0 7.5 6.8 0.6 7622 chr2R 5902146 intron CG43366 + chr2R 5905957 intron CG43366 + chr2R 5909768 intron CG43366 + chr2R_5_5905001 chr2R_5905001 CanS-JC 515 chr2R 6096707 6096733 chr2R 6101931 6101957 BS 10 5224 10.5 6.5 8.5 1.1 5250 chr2R 6096707 intron EcR - chr2R 6099332 intron EcR - chr2R 6101957 intron EcR - chr2R_10_6095001 chr2R_6095001 CanS-JC 516 chr2R 6161284 6161342 chr2R 6161388 6161447 28 104 3.5 6.5 5.0 4.7 163 chr2R 6161284 intron EcR - chr2R 6161366 intron EcR - chr2R 6161447 intron EcR - chr2R_28_6160001 chr2R_6160001 CanS-JC 517 chr2R 6178102 6178144 chr2R 6178254 6178296 9 152 1.5 6.5 4.0 1.8 194 chr2R 6178102 intergenic not near genes chr2R 6178199 intergenic not near genes chr2R 6178296 intergenic not near genes chr2R_9_6175001 chr2R_6175001 CanS-JC 518 chr2R 6240263 6240303 chr2R 6240374 6240414 12 111 3.5 4.5 4.0 2.4 151 chr2R 6240263 intergenic bin3 + chr2R 6240338 intergenic not near genes chr2R 6240414 intergenic not near genes chr2R_12_6240001 chr2R_6240001 CanS-JC 519 chr2R 6494511 6494547 chr2R 6499299 6499335 F-element 9 4788 6.5 1.0 3.8 1.9 4824 chr2R 6494511 intergenic not near genes chr2R 6496923 intergenic not near genes chr2R 6499335 intergenic not near genes chr2R_9_6495001 chr2R_6495001 CanS-JC 520 chr2R 6579772 6579803 chr2R 6584884 6584915 flea 9 5112 2.5 4.5 3.5 2.0 5143 chr2R 6579772 intron jing + chr2R 6582344 intron jing + chr2R 6584915 intron jing + chr2R_9_6580001 chr2R_6580001 CanS-JC 521 chr2R 6597846 6597883 chr2R 6597959 6597997 9 114 7.5 7.0 7.2 1.1 151 chr2R 6597846 intron jing + chr2R 6597922 intron jing + chr2R 6597997 intron jing + chr2R_9_6595001 chr2R_6595001 CanS-JC 522 chr2R 6607905 6607955 chr2R 6608033 6608083 18 128 3.0 4.5 3.8 3.8 178 chr2R 6607905 intron jing + chr2R 6607994 intron jing + chr2R 6608083 intron jing + chr2R_18_6605001 chr2R_6605001 CanS-JC 523 chr2R 6631322 6631342 chr2R 6631453 6631473 11 131 9.0 4.0 6.5 1.5 151 chr2R 6631322 intron Vha16-1 - chr2R 6631398 intron Vha16-1 - chr2R 6631473 intron Vha16-1 - chr2R_11_6630001 chr2R_6630001 CanS-JC 524 chr2R 6631343 6631360 chr2R 6631451 6631491 7 128 5.0 3.5 4.2 1.3 148 chr2R 6631343 intron Vha16-1 - chr2R 6631417 intron Vha16-1 - chr2R 6631491 intron Vha16-1 - chr2R_7_6630001 chr2R_6630001 CanS-JC 525 chr2R 6699566 6699621 chr2R 6699677 6699732 10 111 4.5 4.5 4.5 1.8 166 chr2R 6699566 intergenic Rab2 + chr2R 6699649 intergenic Rab2 + chr2R 6699732 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_10_6695001 chr2R_6695001 CanS-JC 526 chr2R 6759593 6759646 chr2R 6765914 6765967 20 6321 26.0 28.5 27.2 0.7 6374 chr2R 6759593 intergenic Epac - chr2R 6762780 intron Epac - chr2R 6765967 exon Epac - chr2R_20_6760001 chr2R_6760001 CanS-JC 527 chr2R 6897442 6897490 chr2R 6897558 6897606 11 116 4.5 4.5 4.5 2.0 164 chr2R 6897442 intron CG30158 + chr2R 6897524 intron CG30158 + chr2R 6897606 intron CG30158 + chr2R_11_6895001 chr2R_6895001 CanS-JC 528 chr2R 6948070 6948082 chr2R 6948172 6948184 5 102 16.0 9.5 12.8 0.4 114 chr2R 6948070 intron,intron mim -,CheB42c - chr2R 6948127 intron,intron mim -,CheB42c - chr2R 6948184 intron,intron mim -,CheB42c - chr2R_5_6945001 chr2R_6945001 CanS-JC 529 chr2R 6952148 6952174 chr2R 6959754 6959780 opus 4 7606 8.5 8.0 8.2 0.4 7632 chr2R 6952148 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955964 intron,intron mim -,CheB42c - chr2R 6959780 intron,intron mim -,CheB42c - chr2R_4_6955001 chr2R_6955001 CanS-JC 530 chr2R 6978835 6978858 chr2R 6979129 6979152 7 294 11.5 22.0 16.8 0.4 317 chr2R 6978835 intron vimar - chr2R 6978994 intron vimar - chr2R 6979152 intron vimar - chr2R_7_6975001 chr2R_6975001 CanS-JC 531 chr2R 7039169 7039224 chr2R 7039479 7039534 10 309 5.0 8.5 6.8 1.3 365 chr2R 7039169 intergenic CG33914 - chr2R 7039352 intergenic CG33914 - chr2R 7039534 intergenic CG33914 - chr2R_10_7035001 chr2R_7035001 CanS-JC 532 chr2R 7091198 7091226 chr2R 7091306 7091334 9 108 10.5 9.5 10.0 0.8 136 chr2R 7091198 intron esn + chr2R 7091266 intron esn + chr2R 7091334 intron esn + chr2R_9_7090001 chr2R_7090001 CanS-JC 533 chr2R 7099677 7099712 chr2R 7099779 7099814 8 102 7.0 4.5 5.8 1.2 137 chr2R 7099677 intron esn + chr2R 7099746 intron esn + chr2R 7099814 intron esn + chr2R_8_7095001 chr2R_7095001 CanS-JC 534 chr2R 7105066 7105099 chr2R 7105176 7105209 4 110 17.5 21.0 19.2 0.2 143 chr2R 7105066 intron esn + chr2R 7105138 intron esn + chr2R 7105209 intron esn + chr2R_4_7105001 chr2R_7105001 CanS-JC 535 chr2R 7120094 7120151 chr2R 7120235 7120276 7 127 4.5 2.5 3.5 1.6 182 chr2R 7120094 intron esn + chr2R 7120185 intron esn + chr2R 7120276 intron esn + chr2R_7_7120001 chr2R_7120001 CanS-JC 536 chr2R 7160535 7160575 chr2R 7160638 7160679 6 135 0.5 1.0 0.8 3.3 144 chr2R 7160535 intron pk + chr2R 7160607 intron pk + chr2R 7160679 intron pk + chr2R_6_7160001 chr2R_7160001 CanS-JC 537 chr2R 7162306 7162352 chr2R 7162420 7162466 5 114 17.0 18.5 17.8 0.3 160 chr2R 7162306 intron pk + chr2R 7162386 intron pk + chr2R 7162466 intron pk + chr2R_5_7160001 chr2R_7160001 CanS-JC 538 chr2R 7171244 7171282 chr2R 7171356 7171394 15 112 11.0 12.0 11.5 1.2 150 chr2R 7171244 intron pk + chr2R 7171319 intron pk + chr2R 7171394 intron pk + chr2R_15_7170001 chr2R_7170001 CanS-JC 539 chr2R 7196552 7196588 chr2R 7201353 7201389 F-element 11 4801 8.5 5.5 7.0 1.4 4837 chr2R 7196552 intron pk + chr2R 7198970 intron pk + chr2R 7201389 intron pk + chr2R_11_7195001 chr2R_7195001 CanS-JC 540 chr2R 7207835 7207865 chr2R 7207947 7207977 6 112 18.0 19.5 18.8 0.3 142 chr2R 7207835 intron pk + chr2R 7207906 intron pk + chr2R 7207977 intron pk + chr2R_6_7205001 chr2R_7205001 CanS-JC 541 chr2R 7235799 7235846 chr2R 7240917 7240964 jockey 22 5118 4.5 11.0 7.8 2.5 5165 chr2R 7235799 intergenic not near genes chr2R 7238382 intergenic not near genes chr2R 7240964 intergenic not near genes chr2R_22_7235001 chr2R_7235001 CanS-JC 542 chr2R 7235252 7235268 chr2R 7247709 7247725 5 12457 21.5 24.0 22.8 0.2 12473 chr2R 7235252 intergenic Or43a - chr2R 7241488 intergenic not near genes chr2R 7247725 intergenic not near genes chr2R_5_7240001 chr2R_7240001 CanS-JC 543 chr2R 7241279 7241295 chr2R 7249809 7249825 4 8530 27.5 36.0 31.8 0.1 8546 chr2R 7241279 intergenic not near genes chr2R 7245552 5` UTR Ady43A - chr2R 7249825 exon Gadd45 + chr2R_4_7245001 chr2R_7245001 CanS-JC 544 chr2R 7248725 7248780 chr2R 7250286 7250341 10 1562 33.0 29.0 31.0 0.3 1616 chr2R 7248725 intergenic Gadd45 + chr2R 7249533 exon Gadd45 + chr2R 7250341 3` UTR Gadd45 + chr2R_10_7245001 chr2R_7245001 CanS-JC 545 chr2R 7253521 7253559 chr2R 7253862 7253900 15 341 10.5 12.0 11.2 1.2 379 chr2R 7253521 intergenic not near genes chr2R 7253710 intergenic not near genes chr2R 7253900 intergenic not near genes chr2R_15_7250001 chr2R_7250001 CanS-JC 546 chr2R 7269846 7269888 chr2R 7273928 7273970 10 4082 37.0 41.0 39.0 0.2 4124 chr2R 7269846 intergenic not near genes chr2R 7271908 intergenic Br140 - chr2R 7273970 exon Br140 - chr2R_10_7270001 chr2R_7270001 CanS-JC 547 chr2R 7328103 7328149 chr2R 7328240 7328286 11 137 5.0 2.5 3.8 2.3 183 chr2R 7328103 intron,intron Dscam1 -,CR45129 + chr2R 7328194 intron,intron Dscam1 -,CR45129 + chr2R 7328286 intron,intron Dscam1 -,CR45129 + chr2R_11_7325001 chr2R_7325001 CanS-JC 548 chr2R 7340080 7340117 chr2R 7346915 7346952 6 6835 20.0 18.5 19.2 0.3 6872 chr2R 7340080 intron Dscam1 - chr2R 7343516 intron,5` UTR Dscam1 -,CR44071 + chr2R 7346952 intron Dscam1 - chr2R_6_7340001 chr2R_7340001 CanS-JC 549 chr2R 7405362 7405422 chr2R 7405659 7405719 16 297 9.5 7.5 8.5 1.7 357 chr2R 7405362 intron Eaf - chr2R 7405540 intron Eaf - chr2R 7405719 intron Eaf - chr2R_16_7405001 chr2R_7405001 CanS-JC 550 chr2R 7417903 7418169 chr2R 7418005 7418274 17 104 14.5 12.0 13.2 1.2 371 chr2R 7417903 intergenic not near genes chr2R 7418088 intergenic not near genes chr2R 7418274 intergenic not near genes chr2R_17_7415001 chr2R_7415001 CanS-JC 551 chr2R 7434876 7434906 chr2R 7439202 7439233 Juan 8 4327 6.5 7.0 6.8 1.0 4357 chr2R 7434876 intergenic so + chr2R 7437054 intergenic not near genes chr2R 7439233 intergenic not near genes chr2R_8_7435001 chr2R_7435001 CanS-JC 552 chr2R 7459259 7459270 chr2R 7459369 7459384 5 113 7.0 1.5 4.2 1.0 125 chr2R 7459259 intergenic Inos -,CG11141 - chr2R 7459322 intergenic CG11141 -,Inos - chr2R 7459384 intergenic CG11141 - chr2R_5_7455001 chr2R_7455001 CanS-JC 553 chr2R 7590642 7590671 chr2R 7590741 7590774 7 102 19.0 20.0 19.5 0.3 132 chr2R 7590642 exon scra + chr2R 7590708 exon scra + chr2R 7590774 exon scra + chr2R_7_7590001 chr2R_7590001 CanS-JC 554 chr2R 7608387 7608426 chr2R 7613616 7613655 I-element 10 5229 7.0 7.0 7.0 1.2 5268 chr2R 7608387 intron CG1358 - chr2R 7611021 intron CG1358 - chr2R 7613655 intron CG1358 - chr2R_10_7610001 chr2R_7610001 CanS-JC 555 chr2R 7742600 7742627 chr2R 7742881 7742908 4 281 4.0 2.5 3.2 1.0 308 chr2R 7742600 intron,intron CG30497 -,CG45093 - chr2R 7742754 intron,intron CG30497 -,CG45093 - chr2R 7742908 intron,intron CG30497 -,CG45093 - chr2R_4_7740001 chr2R_7740001 CanS-JC 556 chr2R 7769717 7769767 chr2R 7769820 7769870 11 103 10.5 12.0 11.2 0.9 153 chr2R 7769717 intron,intron CG30497 -,CG45093 - chr2R 7769794 intron,intron CG30497 -,CG45093 - chr2R 7769870 intron,intron CG30497 -,CG45093 - chr2R_11_7765001 chr2R_7765001 CanS-JC 557 chr2R 7815653 7815697 chr2R 7822148 7822192 Burdock 9 6494 8.0 6.0 7.0 1.1 6539 chr2R 7815653 intergenic CG1882 + chr2R 7818922 intergenic not near genes chr2R 7822192 3` UTR cathD - chr2R_9_7815001 chr2R_7815001 CanS-JC 558 chr2R 7869170 7869205 chr2R 7873982 7874017 Doc 13 4812 6.5 4.0 5.2 2.1 4847 chr2R 7869170 intron Dgk - chr2R 7871594 intron Dgk - chr2R 7874017 intron Dgk - chr2R_13_7870001 chr2R_7870001 CanS-JC 559 chr2R 7901672 7901713 chr2R 7901867 7901909 6 196 16.5 17.5 17.0 0.3 237 chr2R 7901672 intron CG30377 + chr2R 7901790 intron CG30377 + chr2R 7901909 intron CG30377 + chr2R_6_7900001 chr2R_7900001 CanS-JC 560 chr2R 8015636 8015667 chr2R 8017685 8017716 12 2048 13.0 7.0 10.0 1.1 2080 chr2R 8015636 intergenic mir-4981 + chr2R 8016676 intergenic not near genes chr2R 8017716 intergenic not near genes chr2R_12_8015001 chr2R_8015001 CanS-JC 561 chr2R 8089243 8089287 chr2R 8089355 8089397 11 112 1.0 5.0 3.0 2.8 154 chr2R 8089243 3` UTR sut2 + chr2R 8089320 intergenic sut2 +,sut3 + chr2R 8089397 intergenic sut3 +,sut2 + chr2R_11_8085001 chr2R_8085001 CanS-JC 562 chr2R 8203753 8203772 chr2R 8203871 8203890 4 118 14.0 8.0 11.0 0.3 137 chr2R 8203753 intron LRP1 + chr2R 8203822 intron LRP1 + chr2R 8203890 intron LRP1 + chr2R_4_8200001 chr2R_8200001 CanS-JC 563 chr2R 8209583 8209628 chr2R 8209686 8209731 11 102 15.0 15.0 15.0 0.7 148 chr2R 8209583 exon LRP1 + chr2R 8209657 intron LRP1 + chr2R 8209731 exon LRP1 + chr2R_11_8205001 chr2R_8205001 CanS-JC 564 chr2R 8236032 8236054 chr2R 8236130 8236160 5 104 3.0 3.0 3.0 1.2 128 chr2R 8236032 intergenic not near genes chr2R 8236096 intergenic not near genes chr2R 8236160 intergenic not near genes chr2R_5_8235001 chr2R_8235001 CanS-JC 565 chr2R 8243385 8243432 chr2R 8243516 8243563 7 131 13.0 5.5 9.2 0.7 178 chr2R 8243385 3` UTR CR44445 - chr2R 8243474 3` UTR CR44445 - chr2R 8243563 intergenic CR44445 - chr2R_7_8240001 chr2R_8240001 CanS-JC 566 chr2R 8254018 8254072 chr2R 8254134 8254188 11 116 12.5 15.0 13.8 0.7 170 chr2R 8254018 intergenic CG14760 + chr2R 8254103 intergenic CG14760 + chr2R 8254188 intergenic CG14760 + chr2R_11_8250001 chr2R_8250001 CanS-JC 567 chr2R 8294743 8294799 chr2R 8295112 8295168 13 369 7.5 13.5 10.5 1.1 425 chr2R 8294743 intergenic not near genes chr2R 8294956 intergenic not near genes chr2R 8295168 intergenic not near genes chr2R_13_8290001 chr2R_8290001 CanS-JC 568 chr2R 8330843 8330880 chr2R 8331355 8331392 roo 10 512 7.5 7.0 7.2 1.2 549 chr2R 8330843 intron pdm3 + chr2R 8331118 intron pdm3 + chr2R 8331392 intron pdm3 + chr2R_10_8330001 chr2R_8330001 CanS-JC 569 chr2R 8334270 8334317 chr2R 8334381 8334428 14 111 9.5 12.5 11.0 1.2 158 chr2R 8334270 intron pdm3 + chr2R 8334349 intron pdm3 + chr2R 8334428 intron pdm3 + chr2R_14_8330001 chr2R_8330001 CanS-JC 570 chr2R 8338620 8338668 chr2R 8338728 8338776 11 108 5.5 7.5 6.5 1.5 156 chr2R 8338620 intron pdm3 + chr2R 8338698 intron pdm3 + chr2R 8338776 intron pdm3 + chr2R_11_8335001 chr2R_8335001 CanS-JC 571 chr2R 8339729 8339767 chr2R 8339836 8339874 6 107 12.0 17.0 14.5 0.4 145 chr2R 8339729 intron pdm3 + chr2R 8339802 intron pdm3 + chr2R 8339874 intron pdm3 + chr2R_6_8335001 chr2R_8335001 CanS-JC 572 chr2R 8368163 8368218 chr2R 8368269 8368322 16 105 3.0 6.5 4.8 2.8 159 chr2R 8368163 intron pdm3 + chr2R 8368242 intron pdm3 + chr2R 8368322 intron pdm3 + chr2R_16_8365001 chr2R_8365001 CanS-JC 573 chr2R 8379763 8379818 chr2R 8379885 8379940 9 122 9.5 7.5 8.5 0.9 177 chr2R 8379763 intron pdm3 + chr2R 8379852 intron pdm3 + chr2R 8379940 intron pdm3 + chr2R_9_8375001 chr2R_8375001 CanS-JC 574 chr2R 8398196 8398241 chr2R 8403003 8403048 Doc 15 4807 4.0 6.5 5.2 2.4 4852 chr2R 8398196 intron CG2121 - chr2R 8400622 intron CG2121 - chr2R 8403048 intron CG2121 - chr2R_15_8400001 chr2R_8400001 CanS-JC 575 chr2R 8416230 8416282 chr2R 8416339 8416391 10 109 7.5 6.5 7.0 1.2 161 chr2R 8416230 intergenic not near genes chr2R 8416310 intergenic not near genes chr2R 8416391 intergenic not near genes chr2R_10_8415001 chr2R_8415001 CanS-JC 576 chr2R 8419344 8419393 chr2R 8419453 8419502 6 106 17.0 22.0 19.5 0.3 158 chr2R 8419344 intergenic not near genes chr2R 8419423 intergenic not near genes chr2R 8419502 intergenic not near genes chr2R_6_8415001 chr2R_8415001 CanS-JC 577 chr2R 8452010 8452065 chr2R 8452119 8452174 18 109 16.5 10.5 13.5 1.2 164 chr2R 8452010 intergenic Mal-A1 - chr2R 8452092 intergenic Mal-A1 - chr2R 8452174 intergenic Mal-A1 - chr2R_18_8450001 chr2R_8450001 CanS-JC 578 chr2R 8483939 8483982 chr2R 8484041 8484084 8 102 16.5 22.5 19.5 0.4 145 chr2R 8483939 intron mtt - chr2R 8484012 intron mtt - chr2R 8484084 intron mtt - chr2R_8_8480001 chr2R_8480001 CanS-JC 579 chr2R 8505086 8505090 chr2R 8505188 8505192 6 102 1.5 6.5 4.0 1.2 106 chr2R 8505086 intron mtt - chr2R 8505139 intron mtt - chr2R 8505192 intron mtt - chr2R_6_8505001 chr2R_8505001 CanS-JC 580 chr2R 8518153 8518182 chr2R 8518257 8518286 5 104 12.0 18.0 15.0 0.3 133 chr2R 8518153 intron mtt - chr2R 8518220 intron mtt - chr2R 8518286 intron mtt - chr2R_5_8515001 chr2R_8515001 CanS-JC 581 chr2R 8518772 8518788 chr2R 12066267 12066283 4 3547495 15.0 0.0 7.5 0.5 3547511 chr2R 8518772 intron mtt - chr2R 10292528 intron CAP + chr2R 12066283 intron CG8888 - chr2R_4_10290001 chr2R_10290001 CanS-JC 582 chr2R 8545670 8545708 chr2R 8545779 8545817 6 109 13.0 12.5 12.8 0.4 147 chr2R 8545670 intergenic not near genes chr2R 8545744 intergenic not near genes chr2R 8545817 intergenic not near genes chr2R_6_8545001 chr2R_8545001 CanS-JC 583 chr2R 8658218 8658250 chr2R 8658320 8658352 15 102 0.0 8.5 4.2 2.9 134 chr2R 8658218 intron ptc + chr2R 8658285 intron ptc + chr2R 8658352 intron ptc + chr2R_15_8655001 chr2R_8655001 CanS-JC 584 chr2R 8722739 8722791 chr2R 8723005 8723058 pogo 12 267 4.5 4.5 4.5 2.2 319 chr2R 8722739 intron CG14767 - chr2R 8722898 intron CG14767 - chr2R 8723058 intron CG14767 - chr2R_12_8720001 chr2R_8720001 CanS-JC 585 chr2R 8777927 8777946 chr2R 8784157 8784176 diver 6 6230 2.5 9.5 6.0 0.9 6249 chr2R 8777927 intergenic not near genes chr2R 8781052 intergenic not near genes chr2R 8784176 intergenic not near genes chr2R_6_8780001 chr2R_8780001 CanS-JC 586 chr2R 8849213 8849225 chr2R 8849317 8849329 5 104 8.5 4.5 6.5 0.7 116 chr2R 8849213 intron sns + chr2R 8849271 intron sns + chr2R 8849329 intron sns + chr2R_5_8845001 chr2R_8845001 CanS-JC 587 chr2R 8849231 8849262 chr2R 8849315 8849366 7 101 3.5 4.5 4.0 1.4 135 chr2R 8849231 intron sns + chr2R 8849298 intron sns + chr2R 8849366 intron sns + chr2R_7_8845001 chr2R_8845001 CanS-JC 588 chr2R 8964835 8964873 chr2R 8964943 8964981 8 106 2.5 1.5 2.0 2.7 146 chr2R 8964835 intron CG8216 - chr2R 8964908 intron CG8216 - chr2R 8964981 intron CG8216 - chr2R_8_8960001 chr2R_8960001 CanS-JC 589 chr2R 9043925 9043963 chr2R 9047247 9047285 8 3322 37.5 32.5 35.0 0.2 3360 chr2R 9043925 exon PPO2 - chr2R 9045605 3` UTR CG13743 - chr2R 9047285 intron CG13743 - chr2R_8_9045001 chr2R_9045001 CanS-JC 590 chr2R 9047401 9047437 chr2R 9047522 9047558 14 121 4.0 6.0 5.0 2.3 157 chr2R 9047401 intron CG13743 - chr2R 9047480 intron CG13743 - chr2R 9047558 intron CG13743 - chr2R_14_9045001 chr2R_9045001 CanS-JC 591 chr2R 9052679 9052734 chr2R 9052784 9052841 11 106 2.0 5.5 3.8 2.3 162 chr2R 9052679 intron CG13743 - chr2R 9052760 intron CG13743 - chr2R 9052841 intron CG13743 - chr2R_11_9050001 chr2R_9050001 CanS-JC 592 chr2R 9063101 9063160 chr2R 9063411 9063470 13 310 3.0 4.5 3.8 2.7 369 chr2R 9063101 intron ana + chr2R 9063286 intron ana + chr2R 9063470 intron ana + chr2R_13_9060001 chr2R_9060001 CanS-JC 593 chr2R 9075876 9075931 chr2R 9076037 9076092 16 161 1.5 3.0 2.2 5.0 216 chr2R 9075876 exon ana + chr2R 9075984 intron ana + chr2R 9076092 intron ana + chr2R_16_9075001 chr2R_9075001 CanS-JC 594 chr2R 9078456 9078512 chr2R 9078560 9078616 18 104 4.0 6.0 5.0 3.0 160 chr2R 9078456 intergenic CG8083 + chr2R 9078536 intergenic CG8083 + chr2R 9078616 intergenic CG8083 + chr2R_18_9075001 chr2R_9075001 CanS-JC 595 chr2R 9151278 9151332 chr2R 9157774 9157828 Burdock 9 6496 3.5 3.0 3.2 2.1 6550 chr2R 9151278 exon CG30345 + chr2R 9154553 intergenic not near genes chr2R 9157828 intergenic CG8008 - chr2R_9_9150001 chr2R_9150001 CanS-JC 596 chr2R 9212670 9212719 chr2R 9213182 9213231 roo 23 512 4.0 10.0 7.0 2.9 561 chr2R 9212670 intergenic CR45309 + chr2R 9212950 intergenic CR45309 + chr2R 9213231 5` UTR CR45309 + chr2R_23_9210001 chr2R_9210001 CanS-JC 597 chr2R 9216227 9216277 chr2R 9216364 9216410 7 133 0.0 4.5 2.2 2.2 183 chr2R 9216227 intergenic not near genes chr2R 9216318 intergenic not near genes chr2R 9216410 intergenic not near genes chr2R_7_9215001 chr2R_9215001 CanS-JC 598 chr2R 9237196 9237234 chr2R 9237587 9237625 15 390 6.0 7.0 6.5 2.0 429 chr2R 9237196 intron hig - chr2R 9237410 intron hig - chr2R 9237625 intron,exon hig -,Cyp4p2 + chr2R_15_9235001 chr2R_9235001 CanS-JC 599 chr2R 9271389 9271436 chr2R 9271615 9271664 17 231 2.5 4.0 3.2 4.0 275 chr2R 9271389 intron Pkn - chr2R 9271526 intron Pkn - chr2R 9271664 intron Pkn - chr2R_17_9270001 chr2R_9270001 CanS-JC 600 chr2R 9368100 9368137 chr2R 9368202 9368239 14 102 8.5 0.0 4.2 2.7 139 chr2R 9368100 intron CG13954 - chr2R 9368170 intron CG13954 - chr2R 9368239 intron CG13954 - chr2R_14_9365001 chr2R_9365001 CanS-JC 601 chr2R 9391058 9391083 chr2R 9391645 9391670 4 587 1.0 10.0 5.5 0.6 612 chr2R 9391058 intron l(2)03659 + chr2R 9391364 exon l(2)03659 + chr2R 9391670 exon l(2)03659 + chr2R_4_9390001 chr2R_9390001 CanS-JC 602 chr2R 9466651 9466685 chr2R 9466758 9466792 12 107 7.0 3.0 5.0 2.0 141 chr2R 9466651 intron Camta + chr2R 9466722 intron Camta + chr2R 9466792 intron Camta + chr2R_12_9465001 chr2R_9465001 CanS-JC 603 chr2R 9480067 9480096 chr2R 9490624 9490653 roo 8 10557 5.5 2.0 3.8 1.7 10586 chr2R 9480067 intergenic not near genes chr2R 9485360 intergenic not near genes chr2R 9490653 intergenic not near genes chr2R_8_9485001 chr2R_9485001 CanS-JC 604 chr2R 9561800 9561850 chr2R 9561913 9561964 6 114 0.0 3.5 1.8 2.1 164 chr2R 9561800 3` UTR,intron CR45281 -,CG1809 + chr2R 9561882 3` UTR,intron CR45281 -,CG1809 + chr2R 9561964 3` UTR,intron CR45281 -,CG1809 + chr2R_6_9560001 chr2R_9560001 CanS-JC 605 chr2R 9590468 9590517 chr2R 9590636 9590685 9 168 6.0 0.5 3.2 2.1 217 chr2R 9590468 intron clos - chr2R 9590576 intron clos - chr2R 9590685 intron clos - chr2R_9_9590001 chr2R_9590001 CanS-JC 606 chr2R 9620077 9620080 chr2R 19076523 19076526 4 9456446 5.5 17.0 11.2 0.3 9456449 chr2R 9620077 intron Mmp2 - chr2R 14348302 intron Shroom + chr2R 19076526 intron 5-HT1A + chr2R_4_14345001 chr2R_14345001 CanS-JC 607 chr2R 9656244 9656295 chr2R 9657053 9657104 12 809 23.0 14.0 18.5 0.6 860 chr2R 9656244 intron Mmp2 - chr2R 9656674 intron Mmp2 - chr2R 9657104 intron Mmp2 - chr2R_12_9655001 chr2R_9655001 CanS-JC 608 chr2R 9699382 9699440 chr2R 9699495 9699553 24 112 2.5 3.5 3.0 6.0 171 chr2R 9699382 intergenic not near genes chr2R 9699468 intergenic not near genes chr2R 9699553 intergenic not near genes chr2R_24_9695001 chr2R_9695001 CanS-JC 609 chr2R 9726608 9726640 chr2R 9734174 9734217 17.6 8 7574 2.0 8.5 5.2 1.3 7609 chr2R 9726608 intron sqa - chr2R 9730412 intron sqa - chr2R 9734217 intron sqa - chr2R_8_9730001 chr2R_9730001 CanS-JC 610 chr2R 9790060 9790107 chr2R 9790163 9790210 17 103 8.5 6.0 7.2 2.1 150 chr2R 9790060 intron,5` UTR CG1688 -,CR44208 + chr2R 9790135 intron,5` UTR CG1688 -,CR44208 + chr2R 9790210 intron,5` UTR CG1688 -,CR44208 + chr2R_17_9790001 chr2R_9790001 CanS-JC 611 chr2R 9871019 9871073 chr2R 9871531 9871585 roo 15 510 4.0 6.5 5.2 2.4 566 chr2R 9871019 intron cbx - chr2R 9871302 intron cbx - chr2R 9871585 intron,5` UTR cbx -,CG18446 + chr2R_15_9870001 chr2R_9870001 CanS-JC 612 chr2R 9935008 9935055 chr2R 9935116 9935163 11 108 2.5 2.5 2.5 3.1 155 chr2R 9935008 intron Mef2 - chr2R 9935086 intron Mef2 - chr2R 9935163 intron Mef2 - chr2R_11_9935001 chr2R_9935001 CanS-JC 613 chr2R 9945420 9945463 chr2R 9945631 9945685 BS 12 221 4.0 5.5 4.8 2.1 265 chr2R 9945420 intron Mef2 - chr2R 9945552 intron Mef2 - chr2R 9945685 intron Mef2 - chr2R_12_9945001 chr2R_9945001 CanS-JC 614 chr2R 9948353 9948412 chr2R 9948455 9948514 15 102 5.5 5.0 5.2 2.4 161 chr2R 9948353 intron Mef2 - chr2R 9948434 intron Mef2 - chr2R 9948514 intron Mef2 - chr2R_15_9945001 chr2R_9945001 CanS-JC 615 chr2R 9956046 9956091 chr2R 9956149 9956183 19 102 3.0 4.0 3.5 4.2 137 chr2R 9956046 intron Mef2 - chr2R 9956114 intron Mef2 - chr2R 9956183 intron Mef2 - chr2R_19_9955001 chr2R_9955001 CanS-JC 616 chr2R 9998052 9998080 chr2R 9998172 9998200 4 120 4.0 3.5 3.8 0.8 148 chr2R 9998052 intron Pka-R2 - chr2R 9998126 intron Pka-R2 - chr2R 9998200 intron Pka-R2 - chr2R_4_9995001 chr2R_9995001 CanS-JC 617 chr2R 10005532 10005574 chr2R 10005655 10005697 14 123 3.0 2.0 2.5 4.0 165 chr2R 10005532 intron Pka-R2 - chr2R 10005614 intron Pka-R2 - chr2R 10005697 intron Pka-R2 - chr2R_14_10005001 chr2R_10005001 CanS-JC 618 chr2R 10005825 10005875 chr2R 10007016 10007066 1360 19 1190 3.5 5.0 4.2 3.7 1241 chr2R 10005825 intron Pka-R2 - chr2R 10006446 intron Pka-R2 - chr2R 10007066 intron Pka-R2 - chr2R_19_10005001 chr2R_10005001 CanS-JC 619 chr2R 10008554 10008587 chr2R 10008658 10008700 12 110 0.0 0.0 0.0 12.0 146 chr2R 10008554 intron Pka-R2 - chr2R 10008627 intron Pka-R2 - chr2R 10008700 intron Pka-R2 - chr2R_12_10005001 chr2R_10005001 CanS-JC 620 chr2R 10047799 10047828 chr2R 10047908 10047937 8 109 3.5 2.5 3.0 2.0 138 chr2R 10047799 intron oys - chr2R 10047868 intron oys - chr2R 10047937 intron oys - chr2R_8_10045001 chr2R_10045001 CanS-JC 621 chr2R 10132163 10132210 chr2R 10132269 10132316 7 106 3.0 6.0 4.5 1.3 153 chr2R 10132163 intron gem + chr2R 10132240 intron gem + chr2R 10132316 exon gem + chr2R_7_10130001 chr2R_10130001 CanS-JC 622 chr2R 10168329 10168362 chr2R 10168433 10168465 7 104 5.0 5.5 5.2 1.1 136 chr2R 10168329 intron KCNQ - chr2R 10168397 intron KCNQ - chr2R 10168465 intron KCNQ - chr2R_7_10165001 chr2R_10165001 CanS-JC 623 chr2R 10176864 10176905 chr2R 10186060 10186101 roo 9 9196 4.0 4.5 4.2 1.7 9237 chr2R 10176864 intron KCNQ - chr2R 10181482 intron KCNQ - chr2R 10186101 intron KCNQ - chr2R_9_10180001 chr2R_10180001 CanS-JC 624 chr2R 10189184 10189215 chr2R 10189288 10189318 5 104 2.5 7.5 5.0 0.8 134 chr2R 10189184 intron KCNQ - chr2R 10189251 intron KCNQ - chr2R 10189318 intron KCNQ - chr2R_5_10185001 chr2R_10185001 CanS-JC 625 chr2R 10203616 10203661 chr2R 10203727 10203772 14 111 7.5 5.0 6.2 1.9 156 chr2R 10203616 intergenic not near genes chr2R 10203694 intergenic not near genes chr2R 10203772 intergenic not near genes chr2R_14_10200001 chr2R_10200001 CanS-JC 626 chr2R 10216168 10216218 chr2R 10216272 10216281 10 99 3.0 5.5 4.2 1.9 113 chr2R 10216168 intron,intron CG12912 -,Hr46 - chr2R 10216224 intron,intron CG12912 -,Hr46 - chr2R 10216281 intron,intron CG12912 -,Hr46 - chr2R_10_10215001 chr2R_10215001 CanS-JC 627 chr2R 10225705 10225752 chr2R 10225813 10225860 10 108 2.0 2.0 2.0 3.3 155 chr2R 10225705 intron,intron CG12912 -,Hr46 - chr2R 10225782 intron,intron CG12912 -,Hr46 - chr2R 10225860 intron,intron CG12912 -,Hr46 - chr2R_10_10225001 chr2R_10225001 CanS-JC 628 chr2R 10257132 10257185 chr2R 10257249 10257302 6 117 3.0 0.5 1.8 2.1 170 chr2R 10257132 intron CG12911 + chr2R 10257217 intron CG12911 + chr2R 10257302 intron CG12911 + chr2R_6_10255001 chr2R_10255001 CanS-JC 629 chr2R 10266477 10266530 chr2R 10266594 10266647 15 116 4.0 3.0 3.5 3.3 170 chr2R 10266477 intron CG12910 + chr2R 10266562 intron CG12910 + chr2R 10266647 intron CG12910 + chr2R_15_10265001 chr2R_10265001 CanS-JC 630 chr2R 10274795 10274820 chr2R 10274897 10274922 6 102 9.0 0.0 4.5 1.1 127 chr2R 10274795 intron CAP + chr2R 10274858 intron CAP + chr2R 10274922 intron CAP + chr2R_6_10270001 chr2R_10270001 CanS-JC 631 chr2R 10290090 10290140 chr2R 10290197 10290247 8 107 10.0 4.0 7.0 1.0 157 chr2R 10290090 intron CAP + chr2R 10290168 intron CAP + chr2R 10290247 intron CAP + chr2R_8_10290001 chr2R_10290001 CanS-JC 632 chr2R 10313297 10313342 chr2R 10313411 10313456 16 114 2.5 3.5 3.0 4.0 159 chr2R 10313297 intergenic not near genes chr2R 10313376 intergenic not near genes chr2R 10313456 intergenic Ndg + chr2R_16_10310001 chr2R_10310001 CanS-JC 633 chr2R 10318497 10318531 chr2R 10318609 10318643 8 112 0.5 3.5 2.0 2.7 146 chr2R 10318497 intron Ndg + chr2R 10318570 intron Ndg + chr2R 10318643 intron Ndg + chr2R_8_10315001 chr2R_10315001 CanS-JC 634 chr2R 10319726 10319738 chr2R 10319844 10319856 4 118 8.0 6.5 7.2 0.5 130 chr2R 10319726 intron Ndg + chr2R 10319791 intron Ndg + chr2R 10319856 intron,3` UTR Ndg +,CG34222 - chr2R_4_10315001 chr2R_10315001 CanS-JC 635 chr2R 10322050 10322078 chr2R 10322158 10322186 7 108 3.5 7.0 5.2 1.1 136 chr2R 10322050 3` UTR Ndg + chr2R 10322118 intergenic Ndg + chr2R 10322186 intergenic Ndg + chr2R_7_10320001 chr2R_10320001 CanS-JC 636 chr2R 10352645 10352705 chr2R 10352748 10352808 19 103 3.5 7.0 5.2 3.1 163 chr2R 10352645 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352726 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352808 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_19_10350001 chr2R_10350001 CanS-JC 637 chr2R 10409035 10409080 chr2R 10409138 10409182 8 101 0.0 3.5 1.8 2.9 147 chr2R 10409035 intron CG42732 - chr2R 10409108 intron CG42732 - chr2R 10409182 intron,exon CG42732 -,CG33477 - chr2R_8_10405001 chr2R_10405001 CanS-JC 638 chr2R 10454072 10454129 chr2R 10454175 10454226 29 102 4.0 4.5 4.2 5.6 154 chr2R 10454072 intron,intron Galphao +,Cyp49a1 - chr2R 10454149 intron,intron Galphao +,Cyp49a1 - chr2R 10454226 intron,intron Galphao +,Cyp49a1 - chr2R_29_10450001 chr2R_10450001 CanS-JC 639 chr2R 10468998 10469055 chr2R 10469150 10469207 21 151 3.0 3.0 3.0 5.2 209 chr2R 10468998 intron CG11777 + chr2R 10469102 intron CG11777 + chr2R 10469207 exon CG11777 + chr2R_21_10465001 chr2R_10465001 CanS-JC 640 chr2R 10548106 10548136 chr2R 10548208 10548238 12 102 5.0 7.5 6.2 1.7 132 chr2R 10548106 intergenic not near genes chr2R 10548172 intergenic not near genes chr2R 10548238 intergenic not near genes chr2R_12_10545001 chr2R_10545001 CanS-JC 641 chr2R 10558220 10558244 chr2R 10558322 10558345 10 102 4.5 9.5 7.0 1.2 125 chr2R 10558220 5` UTR psq + chr2R 10558282 5` UTR psq + chr2R 10558345 5` UTR psq + chr2R_10_10555001 chr2R_10555001 CanS-JC 642 chr2R 10561121 10561173 chr2R 10561274 10561326 10 153 1.0 3.0 2.0 3.3 205 chr2R 10561121 intron psq + chr2R 10561224 intron psq + chr2R 10561326 intron psq + chr2R_10_10560001 chr2R_10560001 CanS-JC 643 chr2R 10563907 10563915 chr2R 10564124 10564132 4 217 0.0 6.0 3.0 1.0 225 chr2R 10563907 intron psq + chr2R 10564020 intron psq + chr2R 10564132 intron psq + chr2R_4_10560001 chr2R_10560001 CanS-JC 644 chr2R 10644046 10644074 chr2R 10644150 10644178 9 104 3.5 0.0 1.8 3.2 132 chr2R 10644046 intron Git - chr2R 10644112 intron Git - chr2R 10644178 intron Git - chr2R_9_10640001 chr2R_10640001 CanS-JC 645 chr2R 10653175 10653237 chr2R 10653282 10653341 12 105 6.5 4.0 5.2 1.9 166 chr2R 10653175 intergenic not near genes chr2R 10653258 intergenic not near genes chr2R 10653341 intergenic not near genes chr2R_12_10650001 chr2R_10650001 CanS-JC 646 chr2R 10790122 10790172 chr2R 10790236 10790286 11 114 1.5 8.5 5.0 1.8 164 chr2R 10790122 intron CG33144 - chr2R 10790204 intron CG33144 - chr2R 10790286 intron CG33144 - chr2R_11_10790001 chr2R_10790001 CanS-JC 647 chr2R 10794899 10794937 chr2R 10795003 10795041 9 102 6.0 4.5 5.2 1.5 142 chr2R 10794899 intron CG33144 - chr2R 10794970 intron CG33144 - chr2R 10795041 intron CG33144 - chr2R_9_10790001 chr2R_10790001 CanS-JC 648 chr2R 10796682 10796717 chr2R 10796806 10796842 5 125 5.5 4.0 4.8 0.9 160 chr2R 10796682 intron CG33144 - chr2R 10796762 intron CG33144 - chr2R 10796842 intron CG33144 - chr2R_5_10795001 chr2R_10795001 CanS-JC 649 chr2R 10827312 10827354 chr2R 10827426 10827468 9 114 3.5 4.5 4.0 1.8 156 chr2R 10827312 exon CG12325 + chr2R 10827390 3` UTR CG12325 + chr2R 10827468 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_9_10825001 chr2R_10825001 CanS-JC 650 chr2R 10860461 10860495 chr2R 10860569 10860603 9 108 9.5 3.5 6.5 1.2 142 chr2R 10860461 intron CG30015 - chr2R 10860532 intron CG30015 - chr2R 10860603 intron CG30015 - chr2R_9_10860001 chr2R_10860001 CanS-JC 651 chr2R 10871630 10871675 chr2R 10871735 10871785 11 107 3.0 6.5 4.8 1.9 155 chr2R 10871630 intron CG30015 - chr2R 10871708 intron CG30015 - chr2R 10871785 intron CG30015 - chr2R_11_10870001 chr2R_10870001 CanS-JC 652 chr2R 10872733 10872790 chr2R 10872835 10872892 8 102 2.0 6.0 4.0 1.6 159 chr2R 10872733 intron CG30015 - chr2R 10872812 intron CG30015 - chr2R 10872892 intron CG30015 - chr2R_8_10870001 chr2R_10870001 CanS-JC 653 chr2R 10959073 10959091 chr2R 10959178 10959196 7 105 2.0 4.5 3.2 1.7 123 chr2R 10959073 intergenic not near genes chr2R 10959134 intergenic not near genes chr2R 10959196 intergenic not near genes chr2R_7_10955001 chr2R_10955001 CanS-JC 654 chr2R 10992922 10992980 chr2R 10993034 10993092 10 112 5.0 5.5 5.2 1.6 170 chr2R 10992922 intron luna - chr2R 10993007 intron luna - chr2R 10993092 intron luna - chr2R_10_10990001 chr2R_10990001 CanS-JC 655 chr2R 11009793 11009795 chr2R 11018993 11018995 roo 5 9200 11.0 7.0 9.0 0.5 9202 chr2R 11009793 intron luna - chr2R 11014394 intron luna - chr2R 11018995 intron luna - chr2R_5_11010001 chr2R_11010001 CanS-JC 656 chr2R 11009799 11009843 chr2R 11018988 11019042 roo 21 9198 4.5 5.0 4.8 3.6 9243 chr2R 11009799 intron luna - chr2R 11014420 intron luna - chr2R 11019042 intron luna - chr2R_21_11010001 chr2R_11010001 CanS-JC 657 chr2R 11019857 11019896 chr2R 11024949 11024988 jockey 16 5092 5.0 4.0 4.5 2.9 5131 chr2R 11019857 intron luna - chr2R 11022422 intron luna - chr2R 11024988 intron luna - chr2R_16_11020001 chr2R_11020001 CanS-JC 658 chr2R 11118141 11118180 chr2R 11118244 11118283 6 103 0.0 3.5 1.8 2.1 142 chr2R 11118141 3` UTR Cyp12d1-p - chr2R 11118212 3` UTR Cyp12d1-p - chr2R 11118283 3` UTR Cyp12d1-p - chr2R_6_11115001 chr2R_11115001 CanS-JC 659 chr2R 11179254 11179281 chr2R 11179366 11179393 12 112 6.5 10.0 8.2 1.3 139 chr2R 11179254 intron shn + chr2R 11179324 intron shn + chr2R 11179393 intron shn + chr2R_12_11175001 chr2R_11175001 CanS-JC 660 chr2R 11202101 11202149 chr2R 11202221 11202269 12 120 5.5 6.5 6.0 1.7 168 chr2R 11202101 intron shn + chr2R 11202185 intron shn + chr2R 11202269 intron shn + chr2R_12_11200001 chr2R_11200001 CanS-JC 661 chr2R 11207810 11207836 chr2R 11208029 11208055 BS 6 219 10.0 13.0 11.5 0.5 245 chr2R 11207810 intron shn + chr2R 11207932 intron shn + chr2R 11208055 intron shn + chr2R_6_11205001 chr2R_11205001 CanS-JC 662 chr2R 11263456 11263465 chr2R 11263562 11263571 5 106 6.0 0.5 3.2 1.2 115 chr2R 11263456 intergenic not near genes chr2R 11263514 intergenic not near genes chr2R 11263571 intergenic not near genes chr2R_5_11260001 chr2R_11260001 CanS-JC 663 chr2R 11263830 11263842 chr2R 11263972 11263984 6 142 0.0 9.0 4.5 1.1 154 chr2R 11263830 intergenic not near genes chr2R 11263907 intergenic not near genes chr2R 11263984 intergenic not near genes chr2R_6_11260001 chr2R_11260001 CanS-JC 664 chr2R 11265698 11265714 chr2R 11265806 11265822 9 108 10.5 0.0 5.2 1.5 124 chr2R 11265698 exon Cpr47Ee + chr2R 11265760 exon Cpr47Ee + chr2R 11265822 intron Cpr47Ee + chr2R_9_11265001 chr2R_11265001 CanS-JC 665 chr2R 11344118 11344157 chr2R 11344240 11344279 6 122 0.0 5.0 2.5 1.7 161 chr2R 11344118 intergenic alphaTry - chr2R 11344198 intergenic alphaTry - chr2R 11344279 3` UTR alphaTry - chr2R_6_11340001 chr2R_11340001 CanS-JC 666 chr2R 11366140 11366177 chr2R 11366245 11366282 6 105 12.0 6.5 9.2 0.6 142 chr2R 11366140 intergenic not near genes chr2R 11366211 intergenic CG13204 + chr2R 11366282 intergenic CG13204 + chr2R_6_11365001 chr2R_11365001 CanS-JC 667 chr2R 11368004 11368049 chr2R 11368106 11368151 11 102 1.0 2.5 1.8 3.9 147 chr2R 11368004 intron CG13204 + chr2R 11368078 intron CG13204 + chr2R 11368151 intron CG13204 + chr2R_11_11365001 chr2R_11365001 CanS-JC 668 chr2R 11411702 11411752 chr2R 11411835 11411885 16 133 3.5 2.0 2.8 4.2 183 chr2R 11411702 intron Drip - chr2R 11411794 intron Drip - chr2R 11411885 intron Drip - chr2R_16_11410001 chr2R_11410001 CanS-JC 669 chr2R 11415497 11415549 chr2R 11418672 11418724 opus 11 3174 6.0 7.5 6.8 1.4 3227 chr2R 11415497 intron Drip - chr2R 11417110 intron Drip - chr2R 11418724 intron Drip - chr2R_11_11415001 chr2R_11415001 CanS-JC 670 chr2R 11472625 11472678 chr2R 11473848 11473901 pogo 11 1222 8.5 7.0 7.8 1.2 1276 chr2R 11472625 intergenic not near genes chr2R 11473263 intergenic not near genes chr2R 11473901 intergenic not near genes chr2R_11_11470001 chr2R_11470001 CanS-JC 671 chr2R 11480780 11480793 chr2R 11480899 11480912 4 119 0.0 1.0 0.5 2.7 132 chr2R 11480780 intron inv + chr2R 11480846 intron inv + chr2R 11480912 intron inv + chr2R_4_11480001 chr2R_11480001 CanS-JC 672 chr2R 11540789 11540835 chr2R 11540907 11540953 7 114 0.5 4.0 2.2 2.2 164 chr2R 11540789 intergenic not near genes chr2R 11540871 intergenic not near genes chr2R 11540953 intergenic not near genes chr2R_7_11540001 chr2R_11540001 CanS-JC 673 chr2R 11568677 11568727 chr2R 11568813 11568863 16 136 1.5 3.5 2.5 4.6 186 chr2R 11568677 intergenic not near genes chr2R 11568770 intergenic not near genes chr2R 11568863 intergenic not near genes chr2R_16_11565001 chr2R_11565001 CanS-JC 674 chr2R 11614604 11614780 chr2R 11614718 11614894 19 114 3.0 2.5 2.8 5.0 290 chr2R 11614604 intron tou - chr2R 11614749 intron tou - chr2R 11614894 intron tou - chr2R_19_11610001 chr2R_11610001 CanS-JC 675 chr2R 11631377 11631410 chr2R 11631483 11631516 8 106 0.0 4.5 2.2 2.5 139 chr2R 11631377 intron CG9005 - chr2R 11631446 intron CG9005 - chr2R 11631516 intron CG9005 - chr2R_8_11630001 chr2R_11630001 CanS-JC 676 chr2R 11641838 11641882 chr2R 11641958 11642001 14 120 3.0 4.0 3.5 3.1 163 chr2R 11641838 3` UTR CG9003 - chr2R 11641920 3` UTR CG9003 - chr2R 11642001 3` UTR CG9003 - chr2R_14_11640001 chr2R_11640001 CanS-JC 677 chr2R 11672703 11672718 chr2R 11676125 11676157 4 3426 25.5 14.5 20.0 0.2 3454 chr2R 11672703 intron,intron Roc2 -,Tret1-1 + chr2R 11674430 intron,exon Roc2 -,Tret1-1 + chr2R 11676157 intron,intron Roc2 -,Tret1-2 + chr2R_4_11670001 chr2R_11670001 CanS-JC 678 chr2R 11810058 11810085 chr2R 11810161 11810188 7 103 12.5 9.0 10.8 0.6 130 chr2R 11810058 exon ths + chr2R 11810123 exon ths + chr2R 11810188 exon ths + chr2R_7_11810001 chr2R_11810001 CanS-JC 679 chr2R 11822954 11822995 chr2R 11823057 11823098 10 103 0.0 3.0 1.5 4.0 144 chr2R 11822954 intergenic not near genes chr2R 11823026 intergenic not near genes chr2R 11823098 intergenic not near genes chr2R_10_11820001 chr2R_11820001 CanS-JC 680 chr2R 11934060 11934111 chr2R 11934168 11934219 14 107 6.0 5.0 5.5 2.2 159 chr2R 11934060 intergenic not near genes chr2R 11934140 intergenic not near genes chr2R 11934219 intergenic not near genes chr2R_14_11930001 chr2R_11930001 CanS-JC 681 chr2R 12097741 12097762 chr2R 12097862 12097883 8 121 12.0 3.0 7.5 0.9 142 chr2R 12097741 intron jeb - chr2R 12097812 intron jeb - chr2R 12097883 intron jeb - chr2R_8_12095001 chr2R_12095001 CanS-JC 682 chr2R 12103239 12103288 chr2R 12103529 12103582 21 294 8.0 2.0 5.0 3.5 343 chr2R 12103239 intron jeb - chr2R 12103410 intron jeb - chr2R 12103582 intron jeb - chr2R_21_12100001 chr2R_12100001 CanS-JC 683 chr2R 12124806 12124860 chr2R 12124916 12124970 16 110 3.5 4.0 3.8 3.3 164 chr2R 12124806 intergenic not near genes chr2R 12124888 intergenic not near genes chr2R 12124970 intergenic not near genes chr2R_16_12120001 chr2R_12120001 CanS-JC 684 chr2R 12217557 12217599 chr2R 12217664 12217706 18 106 3.0 5.0 4.0 3.6 149 chr2R 12217557 intergenic not near genes chr2R 12217632 intergenic not near genes chr2R 12217706 intergenic not near genes chr2R_18_12215001 chr2R_12215001 CanS-JC 685 chr2R 12481139 12481160 chr2R 12482969 12482990 roo 10 1830 3.5 12.0 7.8 1.1 1851 chr2R 12481139 exon Dh44-R2 + chr2R 12482064 intron Dh44-R2 + chr2R 12482990 intron Dh44-R2 + chr2R_10_12480001 chr2R_12480001 CanS-JC 686 chr2R 12501672 12501721 chr2R 12503860 12503909 Rt1c 21 2186 4.0 4.0 4.0 4.2 2237 chr2R 12501672 intron fdl - chr2R 12502790 intron fdl - chr2R 12503909 intron fdl - chr2R_21_12500001 chr2R_12500001 CanS-JC 687 chr2R 12524569 12524612 chr2R 12524792 12524827 7 218 3.5 4.0 3.8 1.5 258 chr2R 12524569 intergenic not near genes chr2R 12524698 intergenic not near genes chr2R 12524827 intergenic not near genes chr2R_7_12520001 chr2R_12520001 CanS-JC 688 chr2R 12540452 12540497 chr2R 12540561 12540606 16 109 8.0 4.0 6.0 2.3 154 chr2R 12540452 intron fra + chr2R 12540529 intron fra + chr2R 12540606 intron fra + chr2R_16_12540001 chr2R_12540001 CanS-JC 689 chr2R 12565581 12565592 chr2R 12565956 12565967 6 375 0.0 4.5 2.2 1.9 386 chr2R 12565581 intergenic not near genes chr2R 12565774 intergenic Cyp301a1 + chr2R 12565967 intergenic Cyp301a1 + chr2R_6_12565001 chr2R_12565001 CanS-JC 690 chr2R 12590668 12590717 chr2R 12590914 12590963 20 246 1.5 3.0 2.2 6.2 295 chr2R 12590668 intron,5` UTR Sin3A -,CR30055 + chr2R 12590816 intron,5` UTR Sin3A -,CR30055 + chr2R 12590963 intron,5` UTR Sin3A -,CR30055 + chr2R_20_12590001 chr2R_12590001 CanS-JC 691 chr2R 12643773 12643798 chr2R 12643875 12643897 7 101 2.0 5.5 3.8 1.5 124 chr2R 12643773 intron CG8785 - chr2R 12643835 intron CG8785 - chr2R 12643897 exon CG8785 - chr2R_7_12640001 chr2R_12640001 CanS-JC 692 chr2R 12707135 12707169 chr2R 12707239 12707273 8 102 1.0 6.0 3.5 1.8 138 chr2R 12707135 intron CG42663 + chr2R 12707204 intron CG42663 + chr2R 12707273 intron CG42663 + chr2R_8_12705001 chr2R_12705001 CanS-JC 693 chr2R 12707495 12707545 chr2R 12715887 12715937 roo 15 8392 2.5 4.0 3.2 3.6 8442 chr2R 12707495 intron CG42663 + chr2R 12711716 intron CG42663 + chr2R 12715937 intron CG42663 + chr2R_15_12710001 chr2R_12710001 CanS-JC 694 chr2R 12726299 12726352 chr2R 12726417 12726470 17 118 4.5 6.5 5.5 2.6 171 chr2R 12726299 intron CG42663 + chr2R 12726384 intron CG42663 + chr2R 12726470 intron CG42663 + chr2R_17_12725001 chr2R_12725001 CanS-JC 695 chr2R 12728812 12728858 chr2R 12728976 12729032 4 169 0.0 2.5 1.2 1.8 220 chr2R 12728812 intron CG42663 + chr2R 12728922 intron CG42663 + chr2R 12729032 intron CG42663 + chr2R_4_12725001 chr2R_12725001 CanS-JC 696 chr2R 12789275 12789322 chr2R 12797664 12797711 roo 19 8389 2.0 4.5 3.2 4.5 8436 chr2R 12789275 intron,3` UTR sca +,CR45137 - chr2R 12793493 intron,intron sca +,CR45137 - chr2R 12797711 intron,3` UTR sca +,CR45137 - chr2R_19_12790001 chr2R_12790001 CanS-JC 697 chr2R 12819430 12819473 chr2R 12824525 12824568 jockey 15 5095 9.0 11.0 10.0 1.4 5138 chr2R 12819430 intergenic not near genes chr2R 12821999 intergenic not near genes chr2R 12824568 intergenic not near genes chr2R_15_12820001 chr2R_12820001 CanS-JC 698 chr2R 12836359 12836416 chr2R 12836472 12836529 9 113 6.5 6.5 6.5 1.2 170 chr2R 12836359 intergenic not near genes chr2R 12836444 intergenic not near genes chr2R 12836529 intergenic not near genes chr2R_9_12835001 chr2R_12835001 CanS-JC 699 chr2R 12895554 12895564 chr2R 12895706 12895716 5 151 2.5 11.0 6.8 0.6 162 chr2R 12895554 intron vg + chr2R 12895635 intron vg + chr2R 12895716 intron vg + chr2R_5_12895001 chr2R_12895001 CanS-JC 700 chr2R 12915794 12915839 chr2R 12915915 12915960 19 120 2.0 5.0 3.5 4.2 166 chr2R 12915794 intergenic NAT1 + chr2R 12915877 intergenic NAT1 + chr2R 12915960 intergenic NAT1 + chr2R_19_12915001 chr2R_12915001 CanS-JC 701 chr2R 13043023 13043063 chr2R 13043146 13043186 8 123 4.0 0.0 2.0 2.7 163 chr2R 13043023 intergenic not near genes chr2R 13043104 intergenic not near genes chr2R 13043186 intergenic not near genes chr2R_8_13040001 chr2R_13040001 CanS-JC 702 chr2R 13089729 13089783 chr2R 13089865 13089919 19 136 4.0 3.5 3.8 4.0 190 chr2R 13089729 intergenic not near genes chr2R 13089824 intergenic not near genes chr2R 13089919 intergenic not near genes chr2R_19_13085001 chr2R_13085001 CanS-JC 703 chr2R 13136827 13136864 chr2R 13141651 13141688 Doc 16 4824 8.0 10.0 9.0 1.6 4861 chr2R 13136827 exon Cap-G + chr2R 13139258 intron Cap-G + chr2R 13141688 intron Cap-G + chr2R_16_13135001 chr2R_13135001 CanS-JC 704 chr2R 13167417 13167437 chr2R 13167537 13167557 4 120 8.0 0.0 4.0 0.8 140 chr2R 13167417 intron GLaz - chr2R 13167487 intron GLaz - chr2R 13167557 intron GLaz - chr2R_4_13165001 chr2R_13165001 CanS-JC 705 chr2R 13194830 13194852 chr2R 13194949 13194975 12 122 5.0 9.5 7.2 1.5 145 chr2R 13194830 intergenic not near genes chr2R 13194902 intergenic not near genes chr2R 13194975 intergenic not near genes chr2R_12_13190001 chr2R_13190001 CanS-JC 706 chr2R 13220514 13220553 chr2R 13220618 13220678 6 113 0.0 2.5 1.2 2.7 164 chr2R 13220514 intron CG17059 + chr2R 13220596 intron CG17059 + chr2R 13220678 intron CG17059 + chr2R_6_13220001 chr2R_13220001 CanS-JC 707 chr2R 13376628 13376631 chr2R 13376764 13376767 4 136 4.5 9.0 6.8 0.5 139 chr2R 13376628 intron CG10814 - chr2R 13376698 intron CG10814 - chr2R 13376767 intron CG10814 - chr2R_4_13375001 chr2R_13375001 CanS-JC 708 chr2R 13431469 13431520 chr2R 13431574 13431625 18 105 3.0 6.5 4.8 3.1 156 chr2R 13431469 intron CG42321 - chr2R 13431547 intron CG42321 - chr2R 13431625 intron CG42321 - chr2R_18_13430001 chr2R_13430001 CanS-JC 709 chr2R 13439085 13439226 chr2R 13439226 13439328 14 153 1.5 0.0 0.8 7.8 243 chr2R 13439085 intergenic CG42321 -,cnn - chr2R 13439206 intergenic cnn -,CG42321 - chr2R 13439328 3` UTR cnn - chr2R_14_13435001 chr2R_13435001 CanS-JC 710 chr2R 13544553 13544585 chr2R 13544654 13544687 4 102 0.0 8.0 4.0 0.8 134 chr2R 13544553 intron CG6145 - chr2R 13544620 intron CG6145 - chr2R 13544687 intron CG6145 - chr2R_4_13540001 chr2R_13540001 CanS-JC 711 chr2R 13547059 13547108 chr2R 13547280 13547329 13 221 2.5 3.0 2.8 3.4 270 chr2R 13547059 intron CG6145 - chr2R 13547194 intron CG6145 - chr2R 13547329 intron CG6145 - chr2R_13_13545001 chr2R_13545001 CanS-JC 712 chr2R 13554740 13554774 chr2R 13554841 13554885 13 110 0.0 3.0 1.5 5.2 145 chr2R 13554740 intron Roe1 + chr2R 13554812 intron Roe1 + chr2R 13554885 intron Roe1 + chr2R_13_13550001 chr2R_13550001 CanS-JC 713 chr2R 13568190 13568270 chr2R 13568321 13568379 7 114 0.5 6.5 3.5 1.6 189 chr2R 13568190 intergenic not near genes chr2R 13568284 intergenic not near genes chr2R 13568379 intergenic not near genes chr2R_7_13565001 chr2R_13565001 CanS-JC 714 chr2R 13580487 13580527 chr2R 13580863 13580903 jockey 9 376 7.5 6.5 7.0 1.1 416 chr2R 13580487 3` UTR CG6191 - chr2R 13580695 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580903 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_9_13580001 chr2R_13580001 CanS-JC 715 chr2R 13599978 13599993 chr2R 13600105 13600120 5 127 10.0 1.0 5.5 0.8 142 chr2R 13599978 intergenic not near genes chr2R 13600049 intergenic not near genes chr2R 13600120 intergenic not near genes chr2R_5_13600001 chr2R_13600001 CanS-JC 716 chr2R 13632294 13632313 chr2R 13632408 13632427 5 114 9.0 6.0 7.5 0.6 133 chr2R 13632294 intron fas + chr2R 13632360 intron fas + chr2R 13632427 intron fas + chr2R_5_13630001 chr2R_13630001 CanS-JC 717 chr2R 13709823 13709854 chr2R 13709942 13709970 7 119 2.5 5.5 4.0 1.4 147 chr2R 13709823 intron fas + chr2R 13709896 intron fas + chr2R 13709970 intron fas + chr2R_7_13705001 chr2R_13705001 CanS-JC 718 chr2R 13721182 13721227 chr2R 13721291 13721336 9 109 5.0 8.5 6.8 1.2 154 chr2R 13721182 intron fas + chr2R 13721259 intron fas + chr2R 13721336 intron fas + chr2R_9_13720001 chr2R_13720001 CanS-JC 719 chr2R 13728108 13728160 chr2R 13735791 13735843 opus 6 7683 5.0 3.5 4.2 1.2 7735 chr2R 13728108 intron fas + chr2R 13731976 intron fas + chr2R 13735843 intron fas + chr2R_6_13730001 chr2R_13730001 CanS-JC 720 chr2R 13768966 13769006 chr2R 13769091 13769131 16 125 4.0 6.0 5.0 2.7 165 chr2R 13768966 intergenic not near genes chr2R 13769048 intergenic not near genes chr2R 13769131 intergenic not near genes chr2R_16_13765001 chr2R_13765001 CanS-JC 721 chr2R 13771387 13771446 chr2R 13771489 13771548 15 102 1.0 1.0 1.0 7.5 161 chr2R 13771387 intron Cpr50Ca + chr2R 13771468 intron Cpr50Ca + chr2R 13771548 intron Cpr50Ca + chr2R_15_13770001 chr2R_13770001 CanS-JC 722 chr2R 13793125 13793158 chr2R 13793227 13793259 6 102 6.5 4.5 5.5 0.9 134 chr2R 13793125 intergenic not near genes chr2R 13793192 intergenic not near genes chr2R 13793259 intergenic not near genes chr2R_6_13790001 chr2R_13790001 CanS-JC 723 chr2R 13817675 13817701 chr2R 13817785 13817811 9 110 5.5 3.5 4.5 1.6 136 chr2R 13817675 intron stj + chr2R 13817743 intron stj + chr2R 13817811 intron stj + chr2R_9_13815001 chr2R_13815001 CanS-JC 724 chr2R 13905582 13905630 chr2R 13907590 13907638 Rt1a 15 2008 4.0 5.5 4.8 2.6 2056 chr2R 13905582 intron shot - chr2R 13906610 intron shot - chr2R 13907638 intron shot - chr2R_15_13905001 chr2R_13905001 CanS-JC 725 chr2R 13925844 13925892 chr2R 13926024 13926072 18 180 5.5 5.5 5.5 2.8 228 chr2R 13925844 intron shot - chr2R 13925958 intron shot - chr2R 13926072 intron shot - chr2R_18_13925001 chr2R_13925001 CanS-JC 726 chr2R 13979639 13979698 chr2R 13979776 13979835 17 137 3.5 1.5 2.5 4.9 196 chr2R 13979639 5` UTR CG6701 - chr2R 13979737 5` UTR CG6701 - chr2R 13979835 5` UTR CG6701 - chr2R_17_13975001 chr2R_13975001 CanS-JC 727 chr2R 14037236 14037290 chr2R 14037345 14037399 7 109 0.0 3.0 1.5 2.8 163 chr2R 14037236 intron mam + chr2R 14037318 intron mam + chr2R 14037399 intron mam + chr2R_7_14035001 chr2R_14035001 CanS-JC 728 chr2R 14078025 14078098 chr2R 14078150 14078205 4 120 0.0 2.5 1.2 1.8 180 chr2R 14078025 intron Prosap - chr2R 14078115 intron Prosap - chr2R 14078205 intron Prosap - chr2R_4_14075001 chr2R_14075001 CanS-JC 729 chr2R 14093409 14093421 chr2R 14109586 14109598 4 16177 9.5 0.0 4.8 0.7 16189 chr2R 14093409 intron Prosap - chr2R 14101504 intron Prosap - chr2R 14109598 intron Prosap - chr2R_4_14100001 chr2R_14100001 CanS-JC 730 chr2R 14141933 14141951 chr2R 14142062 14142082 10 131 6.5 6.0 6.2 1.4 149 chr2R 14141933 intergenic not near genes chr2R 14142008 intergenic not near genes chr2R 14142082 intergenic not near genes chr2R_10_14140001 chr2R_14140001 CanS-JC 731 chr2R 14277557 14277609 chr2R 14277665 14277717 9 108 5.5 6.0 5.8 1.3 160 chr2R 14277557 5` UTR Ih + chr2R 14277637 5` UTR Ih + chr2R 14277717 5` UTR Ih + chr2R_9_14275001 chr2R_14275001 CanS-JC 732 chr2R 14285032 14285051 chr2R 14285141 14285160 7 109 5.5 1.5 3.5 1.6 128 chr2R 14285032 intron Ih + chr2R 14285096 intron Ih + chr2R 14285160 intron Ih + chr2R_7_14285001 chr2R_14285001 CanS-JC 733 chr2R 14318555 14318602 chr2R 14318666 14318713 9 110 4.0 0.0 2.0 3.0 158 chr2R 14318555 intron Shroom + chr2R 14318634 intron Shroom + chr2R 14318713 intron Shroom + chr2R_9_14315001 chr2R_14315001 CanS-JC 734 chr2R 14357531 14357577 chr2R 14357647 14357693 14 116 2.5 3.5 3.0 3.5 162 chr2R 14357531 intergenic CG8617 -,Arc1 - chr2R 14357612 intergenic Arc1 -,CG8617 - chr2R 14357693 intergenic Arc1 -,CG8617 - chr2R_14_14355001 chr2R_14355001 CanS-JC 735 chr2R 14393841 14393897 chr2R 14393952 14394008 22 110 3.0 2.5 2.8 5.8 167 chr2R 14393841 intergenic not near genes chr2R 14393924 intergenic not near genes chr2R 14394008 intergenic not near genes chr2R_22_14390001 chr2R_14390001 CanS-JC 736 chr2R 14467285 14467324 chr2R 14476469 14476508 roo 13 9184 3.5 5.0 4.2 2.5 9223 chr2R 14467285 intergenic not near genes chr2R 14471896 intergenic not near genes chr2R 14476508 5` UTR CR44462 + chr2R_13_14470001 chr2R_14470001 CanS-JC 737 chr2R 14497388 14497418 chr2R 14498591 14498621 1360 10 1202 0.5 2.0 1.2 4.5 1233 chr2R 14497388 3` UTR Cpsf160 - chr2R 14498004 intron Cpsf160 - chr2R 14498621 3` UTR Cpsf160 - chr2R_10_14495001 chr2R_14495001 CanS-JC 738 chr2R 14538932 14538982 chr2R 14539034 14539084 19 102 3.0 5.5 4.2 3.7 152 chr2R 14538932 intron ttv + chr2R 14539008 intron ttv + chr2R 14539084 intron ttv + chr2R_19_14535001 chr2R_14535001 CanS-JC 739 chr2R 14542736 14542791 chr2R 14542856 14542914 14 123 3.0 4.0 3.5 3.1 178 chr2R 14542736 intron ttv + chr2R 14542825 intron ttv + chr2R 14542914 intron ttv + chr2R_14_14540001 chr2R_14540001 CanS-JC 740 chr2R 14548356 14548398 chr2R 14548461 14548503 17 105 2.5 6.5 4.5 3.1 147 chr2R 14548356 intron ttv + chr2R 14548430 intron ttv + chr2R 14548503 intron ttv + chr2R_17_14545001 chr2R_14545001 CanS-JC 741 chr2R 14565535 14565584 chr2R 14565638 14565687 10 103 3.5 4.5 4.0 2.0 152 chr2R 14565535 intron ttv + chr2R 14565611 intron ttv + chr2R 14565687 intron ttv + chr2R_10_14565001 chr2R_14565001 CanS-JC 742 chr2R 14566421 14566470 chr2R 14566534 14566561 16 112 5.5 4.0 4.8 2.8 140 chr2R 14566421 intron ttv + chr2R 14566491 intron ttv + chr2R 14566561 intron ttv + chr2R_16_14565001 chr2R_14565001 CanS-JC 743 chr2R 14667800 14667851 chr2R 14671618 14671669 14 3818 40.0 24.5 32.2 0.4 3869 chr2R 14667800 intergenic not near genes chr2R 14669734 exon CG12866 + chr2R 14671669 3` UTR,3` UTR CG12866 +,mspo - chr2R_14_14665001 chr2R_14665001 CanS-JC 744 chr2R 14698304 14698346 chr2R 14698407 14698449 16 103 7.0 0.5 3.8 3.3 145 chr2R 14698304 intron mspo - chr2R 14698376 intron mspo - chr2R 14698449 intron mspo - chr2R_16_14695001 chr2R_14695001 CanS-JC 745 chr2R 14702309 14702362 chr2R 14702417 14702469 9 107 2.5 6.5 4.5 1.6 160 chr2R 14702309 intron mspo - chr2R 14702389 intron mspo - chr2R 14702469 intron mspo - chr2R_9_14700001 chr2R_14700001 CanS-JC 746 chr2R 14715677 14715719 chr2R 14715780 14715822 11 102 4.5 2.5 3.5 2.4 145 chr2R 14715677 intergenic not near genes chr2R 14715750 intergenic not near genes chr2R 14715822 intergenic not near genes chr2R_11_14715001 chr2R_14715001 CanS-JC 747 chr2R 14722287 14722299 chr2R 14722417 14722429 8 130 9.0 11.5 10.2 0.7 142 chr2R 14722287 intergenic not near genes chr2R 14722358 intergenic not near genes chr2R 14722429 intergenic not near genes chr2R_8_14720001 chr2R_14720001 CanS-JC 748 chr2R 14737606 14737637 chr2R 14737716 14737747 5 110 7.0 10.0 8.5 0.5 141 chr2R 14737606 3` UTR CR43428 - chr2R 14737676 3` UTR CR43428 - chr2R 14737747 3` UTR CR43428 - chr2R_5_14735001 chr2R_14735001 CanS-JC 749 chr2R 14796315 14796360 chr2R 14796438 14796483 4 123 2.5 7.5 5.0 0.7 168 chr2R 14796315 intron kn - chr2R 14796399 intron kn - chr2R 14796483 intron kn - chr2R_4_14795001 chr2R_14795001 CanS-JC 750 chr2R 14803451 14803466 chr2R 14803557 14803572 5 106 0.0 3.0 1.5 2.0 121 chr2R 14803451 intron kn - chr2R 14803512 intron kn - chr2R 14803572 intron kn - chr2R_5_14800001 chr2R_14800001 CanS-JC 751 chr2R 14842361 14842383 chr2R 14842483 14842505 10 122 3.0 1.0 2.0 3.3 144 chr2R 14842361 intergenic NaPi-T - chr2R 14842433 intergenic NaPi-T - chr2R 14842505 intergenic NaPi-T - chr2R_10_14840001 chr2R_14840001 CanS-JC 752 chr2R 14855004 14855039 chr2R 14855122 14855157 11 118 7.5 0.0 3.8 2.3 153 chr2R 14855004 5` UTR Ciao1 - chr2R 14855080 intergenic Ciao1 -,HPS1 + chr2R 14855157 intergenic Ciao1 -,HPS1 + chr2R_11_14855001 chr2R_14855001 CanS-JC 753 chr2R 14873666 14873722 chr2R 14875210 14875266 18 1544 4.0 0.0 2.0 6.0 1600 chr2R 14873666 intergenic Cyp6a22 +,Cyp6a17 + chr2R 14874466 exon Cyp6a17 + chr2R 14875266 exon Cyp6a17 + chr2R_18_14870001 chr2R_14870001 CanS-JC 754 chr2R 14875220 14875265 chr2R 14875658 14875703 8 438 0.0 3.0 1.5 3.2 483 chr2R 14875220 exon Cyp6a17 + chr2R 14875462 exon Cyp6a17 + chr2R 14875703 3` UTR Cyp6a17 + chr2R_8_14875001 chr2R_14875001 CanS-JC 755 chr2R 14889188 14889209 chr2R 14897822 14897843 Max-element 9 8634 7.5 0.0 3.8 1.9 8655 chr2R 14889188 intergenic Cyp6a8 - chr2R 14893516 intergenic not near genes chr2R 14897843 intergenic not near genes chr2R_9_14890001 chr2R_14890001 CanS-JC 756 chr2R 14906462 14906507 chr2R 14906598 14906643 10 136 6.5 3.5 5.0 1.7 181 chr2R 14906462 intron CG10249 - chr2R 14906552 intron CG10249 - chr2R 14906643 intron CG10249 - chr2R_10_14905001 chr2R_14905001 CanS-JC 757 chr2R 14911675 14911727 chr2R 14911824 14911876 19 149 4.0 2.5 3.2 4.5 201 chr2R 14911675 intron CG10249 - chr2R 14911776 intron CG10249 - chr2R 14911876 intron CG10249 - chr2R_19_14910001 chr2R_14910001 CanS-JC 758 chr2R 14916532 14916558 chr2R 14916638 14916664 6 106 4.5 1.5 3.0 1.5 132 chr2R 14916532 intron CG10249 - chr2R 14916598 intron CG10249 - chr2R 14916664 intron CG10249 - chr2R_6_14915001 chr2R_14915001 CanS-JC 759 chr2R 14919021 14919175 chr2R 14919127 14919310 18 117 0.0 0.0 0.0 18.0 289 chr2R 14919021 intron CG10249 - chr2R 14919166 intron CG10249 - chr2R 14919310 intron CG10249 - chr2R_18_14915001 chr2R_14915001 CanS-JC 760 chr2R 14922118 14922169 chr2R 14922220 14922271 9 102 5.5 2.5 4.0 1.8 153 chr2R 14922118 intron CG10249 - chr2R 14922194 intron CG10249 - chr2R 14922271 intron CG10249 - chr2R_9_14920001 chr2R_14920001 CanS-JC 761 chr2R 14987358 14987413 chr2R 14987528 14987583 19 170 2.0 1.5 1.8 6.8 225 chr2R 14987358 intron pcs + chr2R 14987470 intron pcs + chr2R 14987583 intron pcs + chr2R_19_14985001 chr2R_14985001 CanS-JC 762 chr2R 14998497 14998505 chr2R 14998663 14998671 4 166 6.5 6.5 6.5 0.5 174 chr2R 14998497 intergenic not near genes chr2R 14998584 intergenic not near genes chr2R 14998671 intergenic not near genes chr2R_4_14995001 chr2R_14995001 CanS-JC 763 chr2R 15004706 15004744 chr2R 15005061 15005099 jockey 13 355 10.0 3.0 6.5 1.7 393 chr2R 15004706 intergenic not near genes chr2R 15004902 intergenic not near genes chr2R 15005099 intergenic not near genes chr2R_13_15000001 chr2R_15000001 CanS-JC 764 chr2R 15015438 15015488 chr2R 15022888 15022925 mdg1 9 7446 3.5 0.0 1.8 3.2 7487 chr2R 15015438 intron hbs + chr2R 15019182 intron hbs + chr2R 15022925 intron hbs + chr2R_9_15015001 chr2R_15015001 CanS-JC 765 chr2R 15058171 15058222 chr2R 15058329 15058380 17 158 2.5 6.5 4.5 3.1 209 chr2R 15058171 intergenic not near genes chr2R 15058276 intergenic not near genes chr2R 15058380 intergenic not near genes chr2R_17_15055001 chr2R_15055001 CanS-JC 766 chr2R 15084953 15084992 chr2R 15092028 15092066 297 4 7075 9.5 7.0 8.2 0.4 7113 chr2R 15084953 intergenic not near genes chr2R 15088510 intergenic not near genes chr2R 15092066 5` UTR CR44457 + chr2R_4_15085001 chr2R_15085001 CanS-JC 767 chr2R 15092183 15092193 chr2R 15092286 15092296 5 103 2.5 10.5 6.5 0.7 113 chr2R 15092183 intron CR44457 + chr2R 15092240 5` UTR CR44457 + chr2R 15092296 5` UTR CR44457 + chr2R_5_15090001 chr2R_15090001 CanS-JC 768 chr2R 15119299 15119346 chr2R 15127806 15127853 Tirant 8 8507 4.0 5.5 4.8 1.4 8554 chr2R 15119299 intron chn + chr2R 15123576 intron chn + chr2R 15127853 intron chn + chr2R_8_15120001 chr2R_15120001 CanS-JC 769 chr2R 15152209 15152246 chr2R 15152360 15152397 14 151 3.5 4.5 4.0 2.8 188 chr2R 15152209 intergenic not near genes chr2R 15152303 intergenic not near genes chr2R 15152397 intergenic not near genes chr2R_14_15150001 chr2R_15150001 CanS-JC 770 chr2R 15160743 15160802 chr2R 15160874 15160933 17 131 2.5 2.5 2.5 4.9 190 chr2R 15160743 intron igl + chr2R 15160838 intron igl + chr2R 15160933 intron igl + chr2R_17_15160001 chr2R_15160001 CanS-JC 771 chr2R 15181580 15181610 chr2R 15181888 15181918 6 308 2.0 4.0 3.0 1.5 338 chr2R 15181580 intron igl + chr2R 15181749 intron igl + chr2R 15181918 intron igl + chr2R_6_15180001 chr2R_15180001 CanS-JC 772 chr2R 15201210 15201258 chr2R 15201327 15201375 10 117 2.5 2.5 2.5 2.9 165 chr2R 15201210 intergenic GPHR -,CG11807 + chr2R 15201292 5` UTR CG11807 + chr2R 15201375 intron CG11807 + chr2R_10_15200001 chr2R_15200001 CanS-JC 773 chr2R 15296133 15296157 chr2R 15296242 15296266 10 109 4.5 3.5 4.0 2.0 133 chr2R 15296133 intron Trpm - chr2R 15296200 intron Trpm - chr2R 15296266 intron Trpm - chr2R_10_15295001 chr2R_15295001 CanS-JC 774 chr2R 15330195 15330221 chr2R 15330355 15330381 8 160 3.0 3.5 3.2 1.9 186 chr2R 15330195 intergenic CR44371 - chr2R 15330288 intergenic CR44371 - chr2R 15330381 intergenic CR44371 - chr2R_8_15330001 chr2R_15330001 CanS-JC 775 chr2R 15374789 15375058 chr2R 15374898 15375194 6 118 2.5 2.0 2.2 1.9 405 chr2R 15374789 intergenic not near genes chr2R 15374992 intergenic not near genes chr2R 15375194 intergenic not near genes chr2R_6_15370001 chr2R_15370001 CanS-JC 776 chr2R 15404091 15404130 chr2R 15404214 15404254 16 123 5.5 2.5 4.0 3.2 163 chr2R 15404091 intron CG43729 + chr2R 15404172 intron CG43729 + chr2R 15404254 intron CG43729 + chr2R_16_15400001 chr2R_15400001 CanS-JC 777 chr2R 15425270 15425285 chr2R 15425375 15425390 8 105 12.5 10.5 11.5 0.6 120 chr2R 15425270 intron CG43729 + chr2R 15425330 intron CG43729 + chr2R 15425390 intron CG43729 + chr2R_8_15425001 chr2R_15425001 CanS-JC 778 chr2R 15497643 15497695 chr2R 15497748 15497799 9 104 1.5 3.5 2.5 2.6 156 chr2R 15497643 intergenic CG12964 - chr2R 15497721 intergenic CG12964 - chr2R 15497799 intergenic not near genes chr2R_9_15495001 chr2R_15495001 CanS-JC 779 chr2R 15645658 15645690 chr2R 15645780 15645790 7 119 10.0 0.0 5.0 1.2 132 chr2R 15645658 intron CG42524 + chr2R 15645724 intron CG42524 + chr2R 15645790 intron CG42524 + chr2R_7_15645001 chr2R_15645001 CanS-JC 780 chr2R 15720741 15720796 chr2R 15720863 15720918 7 122 4.0 2.0 3.0 1.8 177 chr2R 15720741 intergenic not near genes chr2R 15720830 intergenic not near genes chr2R 15720918 intergenic not near genes chr2R_7_15720001 chr2R_15720001 CanS-JC 781 chr2R 15828125 15828136 chr2R 15828311 15828322 4 186 2.0 1.0 1.5 1.6 197 chr2R 15828125 intron,intron tun +,Poxn - chr2R 15828224 intron,intron tun +,Poxn - chr2R 15828322 intron,intron tun +,Poxn - chr2R_4_15825001 chr2R_15825001 CanS-JC 782 chr2R 15833504 15833548 chr2R 15833617 15833661 9 113 7.0 5.5 6.2 1.2 157 chr2R 15833504 intron,intron tun +,Poxn - chr2R 15833582 intron,intron tun +,Poxn - chr2R 15833661 intron,intron tun +,Poxn - chr2R_9_15830001 chr2R_15830001 CanS-JC 783 chr2R 15885197 15885245 chr2R 15885306 15885354 12 109 6.5 2.5 4.5 2.2 157 chr2R 15885197 intron sli - chr2R 15885276 intron sli - chr2R 15885354 exon sli - chr2R_12_15885001 chr2R_15885001 CanS-JC 784 chr2R 15891792 15891835 chr2R 15891894 15891937 12 102 1.0 5.0 3.0 3.0 145 chr2R 15891792 intron sli - chr2R 15891864 intron sli - chr2R 15891937 intron sli - chr2R_12_15890001 chr2R_15890001 CanS-JC 785 chr2R 15892408 15892457 chr2R 15892511 15892560 17 103 3.5 4.5 4.0 3.4 152 chr2R 15892408 intron sli - chr2R 15892484 intron sli - chr2R 15892560 intron sli - chr2R_17_15890001 chr2R_15890001 CanS-JC 786 chr2R 15905519 15905572 chr2R 15905625 15905679 13 105 3.5 4.0 3.8 2.7 160 chr2R 15905519 intron sli - chr2R 15905599 intron sli - chr2R 15905679 intron sli - chr2R_13_15905001 chr2R_15905001 CanS-JC 787 chr2R 15922529 15922570 chr2R 15922714 15922754 11 185 2.0 0.0 1.0 5.5 225 chr2R 15922529 intergenic sli - chr2R 15922642 intergenic bdg - chr2R 15922754 intergenic bdg - chr2R_11_15920001 chr2R_15920001 CanS-JC 788 chr2R 15951839 15951851 chr2R 15951924 15951953 5 98 0.0 4.0 2.0 1.7 114 chr2R 15951839 intron Strn-Mlck - chr2R 15951896 intron Strn-Mlck - chr2R 15951953 intron Strn-Mlck - chr2R_5_15950001 chr2R_15950001 CanS-JC 789 chr2R 16037206 16037227 chr2R 16037309 16037330 4 103 8.0 10.0 9.0 0.4 124 chr2R 16037206 intron SP2353 + chr2R 16037268 intron SP2353 + chr2R 16037330 intron SP2353 + chr2R_4_16035001 chr2R_16035001 CanS-JC 790 chr2R 16054926 16054959 chr2R 16055035 16055068 6 109 4.0 12.5 8.2 0.7 142 chr2R 16054926 intron CG8405 + chr2R 16054997 intron CG8405 + chr2R 16055068 intron CG8405 + chr2R_6_16050001 chr2R_16050001 CanS-JC 791 chr2R 16155175 16155200 chr2R 16155461 16155486 5 286 8.5 7.5 8.0 0.6 311 chr2R 16155175 intron lbk + chr2R 16155330 intron lbk + chr2R 16155486 intron lbk + chr2R_5_16155001 chr2R_16155001 CanS-JC 792 chr2R 16196001 16196054 chr2R 16196115 16196162 12 113 5.5 7.5 6.5 1.6 161 chr2R 16196001 intron calypso - chr2R 16196082 5` UTR calypso - chr2R 16196162 5` UTR calypso - chr2R_12_16195001 chr2R_16195001 CanS-JC 793 chr2R 16245612 16245660 chr2R 16245726 16245774 17 114 3.5 4.0 3.8 3.5 162 chr2R 16245612 intron CngA - chr2R 16245693 intron CngA - chr2R 16245774 intron CngA - chr2R_17_16245001 chr2R_16245001 CanS-JC 794 chr2R 16352840 16352866 chr2R 16352949 16352975 11 108 2.5 3.5 3.0 2.8 135 chr2R 16352840 intergenic not near genes chr2R 16352908 intergenic not near genes chr2R 16352975 intergenic not near genes chr2R_11_16350001 chr2R_16350001 CanS-JC 795 chr2R 16387486 16387541 chr2R 16387993 16388048 9 507 2.5 1.0 1.8 3.2 562 chr2R 16387486 intron Sema-2b + chr2R 16387767 intron Sema-2b + chr2R 16388048 intron Sema-2b + chr2R_9_16385001 chr2R_16385001 CanS-JC 796 chr2R 16406696 16406749 chr2R 16406800 16406853 12 104 4.5 3.5 4.0 2.4 157 chr2R 16406696 intron Sema-2b + chr2R 16406774 intron Sema-2b + chr2R 16406853 intron Sema-2b + chr2R_12_16405001 chr2R_16405001 CanS-JC 797 chr2R 16458005 16458029 chr2R 16458111 16458116 7 103 6.0 0.0 3.0 1.8 111 chr2R 16458005 intergenic not near genes chr2R 16458060 intergenic not near genes chr2R 16458116 intergenic not near genes chr2R_7_16455001 chr2R_16455001 CanS-JC 798 chr2R 16463155 16463164 chr2R 16463257 16463266 5 102 8.5 4.0 6.2 0.7 111 chr2R 16463155 intergenic not near genes chr2R 16463210 intergenic not near genes chr2R 16463266 intergenic not near genes chr2R_5_16460001 chr2R_16460001 CanS-JC 799 chr2R 16480724 16480779 chr2R 16480826 16480881 22 102 8.0 5.5 6.8 2.8 157 chr2R 16480724 intergenic not near genes chr2R 16480802 intergenic not near genes chr2R 16480881 intergenic not near genes chr2R_22_16480001 chr2R_16480001 CanS-JC 800 chr2R 16496331 16496345 chr2R 16496438 16496452 4 107 0.0 0.0 0.0 4.0 121 chr2R 16496331 intergenic not near genes chr2R 16496392 intergenic CG7813 - chr2R 16496452 intergenic CG7813 - chr2R_4_16495001 chr2R_16495001 CanS-JC 801 chr2R 16503846 16503903 chr2R 16503962 16504019 8 116 4.5 3.0 3.8 1.7 173 chr2R 16503846 intron Sema-2a + chr2R 16503932 intron Sema-2a + chr2R 16504019 intron Sema-2a + chr2R_8_16500001 chr2R_16500001 CanS-JC 802 chr2R 16518020 16518066 chr2R 16518122 16518168 6 102 3.5 4.0 3.8 1.2 148 chr2R 16518020 intron Sema-2a + chr2R 16518094 intron Sema-2a + chr2R 16518168 intron Sema-2a + chr2R_6_16515001 chr2R_16515001 CanS-JC 803 chr2R 16539629 16539670 chr2R 16544864 16544905 copia 8 5235 5.5 5.0 5.2 1.3 5276 chr2R 16539629 intergenic not near genes chr2R 16542267 intergenic not near genes chr2R 16544905 intergenic not near genes chr2R_8_16540001 chr2R_16540001 CanS-JC 804 chr2R 16546979 16546986 chr2R 16547085 16547092 5 106 0.0 0.0 0.0 5.0 113 chr2R 16546979 intergenic not near genes chr2R 16547036 intergenic not near genes chr2R 16547092 intergenic not near genes chr2R_5_16545001 chr2R_16545001 CanS-JC 805 chr2R 16578114 16578139 chr2R 16578224 16578249 7 110 3.0 1.5 2.2 2.2 135 chr2R 16578114 intergenic not near genes chr2R 16578182 intergenic not near genes chr2R 16578249 intergenic not near genes chr2R_7_16575001 chr2R_16575001 CanS-JC 806 chr2R 16617059 16617089 chr2R 16617164 16617195 4 105 2.5 11.5 7.0 0.5 136 chr2R 16617059 intron CG5065 + chr2R 16617127 intron CG5065 + chr2R 16617195 intron CG5065 + chr2R_4_16615001 chr2R_16615001 CanS-JC 807 chr2R 16713053 16713065 chr2R 16713163 16713175 5 110 0.0 10.0 5.0 0.8 122 chr2R 16713053 intron CG30463 - chr2R 16713114 intron CG30463 - chr2R 16713175 intron CG30463 - chr2R_5_16710001 chr2R_16710001 CanS-JC 808 chr2R 16723900 16723947 chr2R 16724006 16724053 10 105 2.5 3.5 3.0 2.5 153 chr2R 16723900 intron CG30463 - chr2R 16723976 intron CG30463 - chr2R 16724053 intron CG30463 - chr2R_10_16720001 chr2R_16720001 CanS-JC 809 chr2R 17079042 17079085 chr2R 17079150 17079192 10 108 0.5 4.0 2.2 3.1 150 chr2R 17079042 intron CG30460 - chr2R 17079117 intron CG30460 - chr2R 17079192 intron CG30460 - chr2R_10_17075001 chr2R_17075001 CanS-JC 810 chr2R 17087444 17087498 chr2R 17087547 17087594 11 102 3.0 8.5 5.8 1.6 150 chr2R 17087444 5` UTR CG30460 - chr2R 17087519 5` UTR CG30460 - chr2R 17087594 5` UTR CG30460 - chr2R_11_17085001 chr2R_17085001 CanS-JC 811 chr2R 17097511 17097524 chr2R 17097614 17097627 6 103 11.0 8.5 9.8 0.6 116 chr2R 17097511 5` UTR GstS1 - chr2R 17097569 intron GstS1 - chr2R 17097627 intron GstS1 - chr2R_6_17095001 chr2R_17095001 CanS-JC 812 chr2R 17097535 17097544 chr2R 17097613 17097647 5 98 9.0 8.5 8.8 0.5 112 chr2R 17097535 5` UTR GstS1 - chr2R 17097591 intron GstS1 - chr2R 17097647 intron GstS1 - chr2R_5_17095001 chr2R_17095001 CanS-JC 813 chr2R 17098644 17098656 chr2R 17098759 17098771 5 115 6.0 9.0 7.5 0.6 127 chr2R 17098644 intergenic GstS1 - chr2R 17098708 intergenic GstS1 - chr2R 17098771 intergenic GstS1 - chr2R_5_17095001 chr2R_17095001 CanS-JC 814 chr2R 17139394 17139406 chr2R 17139560 17139572 4 166 1.5 5.5 3.5 0.9 178 chr2R 17139394 3` UTR CG11395 + chr2R 17139483 3` UTR,3` UTR CG11395 +,CG43103 - chr2R 17139572 3` UTR,3` UTR CG11395 +,CG43103 - chr2R_4_17135001 chr2R_17135001 CanS-JC 815 chr2R 17147219 17147268 chr2R 17152276 17152302 jockey 17 5056 4.0 4.0 4.0 3.4 5083 chr2R 17147219 intergenic not near genes chr2R 17149760 intergenic not near genes chr2R 17152302 intergenic not near genes chr2R_17_17145001 chr2R_17145001 CanS-JC 816 chr2R 17161328 17161341 chr2R 17161561 17161574 6 233 7.5 0.0 3.8 1.2 246 chr2R 17161328 intergenic CG30457 - chr2R 17161451 intergenic not near genes chr2R 17161574 intergenic not near genes chr2R_6_17160001 chr2R_17160001 CanS-JC 817 chr2R 17176360 17176382 chr2R 17182576 17182598 diver 8 6216 0.0 7.0 3.5 1.8 6238 chr2R 17176360 intergenic not near genes chr2R 17179479 intergenic not near genes chr2R 17182598 intergenic not near genes chr2R_8_17175001 chr2R_17175001 CanS-JC 818 chr2R 17236488 17236532 chr2R 17241718 17241762 copia 15 5230 3.0 5.5 4.2 2.9 5274 chr2R 17236488 intron mbl + chr2R 17239125 intron mbl + chr2R 17241762 intron mbl + chr2R_15_17235001 chr2R_17235001 CanS-JC 819 chr2R 17443784 17443802 chr2R 17443886 17443904 7 102 1.0 8.0 4.5 1.3 120 chr2R 17443784 intron EDTP - chr2R 17443844 intron EDTP - chr2R 17443904 intron EDTP - chr2R_7_17440001 chr2R_17440001 CanS-JC 820 chr2R 17458981 17459023 chr2R 17459092 17459134 8 111 6.0 7.0 6.5 1.1 153 chr2R 17458981 intron CG14478 + chr2R 17459058 intron CG14478 + chr2R 17459134 intron CG14478 + chr2R_8_17455001 chr2R_17455001 CanS-JC 821 chr2R 17470333 17470348 chr2R 17470443 17470458 4 110 1.5 2.0 1.8 1.4 125 chr2R 17470333 intron qkr54B + chr2R 17470396 intron qkr54B + chr2R 17470458 intron qkr54B + chr2R_4_17470001 chr2R_17470001 CanS-JC 822 chr2R 17485891 17485940 chr2R 17490679 17490728 F-element 7 4788 11.0 8.0 9.5 0.7 4837 chr2R 17485891 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488310 intron NT5E-2 + chr2R 17490728 intron NT5E-2 + chr2R_7_17485001 chr2R_17485001 CanS-JC 823 chr2R 17499051 17499092 chr2R 17499176 17499217 12 125 3.5 2.5 3.0 3.0 166 chr2R 17499051 intergenic not near genes chr2R 17499134 intergenic not near genes chr2R 17499217 intergenic not near genes chr2R_12_17495001 chr2R_17495001 CanS-JC 824 chr2R 17594859 17594911 chr2R 17596623 17596673 15 1764 16.0 21.5 18.8 0.8 1814 chr2R 17594859 intron lack + chr2R 17595766 intron,exon lack +,CG11423 + chr2R 17596673 intron,exon lack +,CG11423 + chr2R_15_17595001 chr2R_17595001 CanS-JC 825 chr2R 17594452 17594510 chr2R 17597070 17597128 14 2618 31.5 36.5 34.0 0.4 2676 chr2R 17594452 intron lack + chr2R 17595790 intron,exon lack +,CG11423 + chr2R 17597128 intron,exon lack +,CG11423 + chr2R_14_17595001 chr2R_17595001 CanS-JC 826 chr2R 17655178 17655234 chr2R 17655281 17655337 16 103 5.5 2.0 3.8 3.3 159 chr2R 17655178 intron CCHa1-R - chr2R 17655258 intron CCHa1-R - chr2R 17655337 intron CCHa1-R - chr2R_16_17655001 chr2R_17655001 CanS-JC 827 chr2R 17679575 17679598 chr2R 17679728 17679751 5 153 0.0 1.5 0.8 2.8 176 chr2R 17679575 intron Sema-1b - chr2R 17679663 intron Sema-1b - chr2R 17679751 intron Sema-1b - chr2R_5_17675001 chr2R_17675001 CanS-JC 828 chr2R 17709958 17710111 chr2R 17710075 17710215 12 114 0.0 0.0 0.0 12.0 257 chr2R 17709958 intron CG6424 - chr2R 17710086 intron CG6424 - chr2R 17710215 intron CG6424 - chr2R_12_17710001 chr2R_17710001 CanS-JC 829 chr2R 17782346 17782388 chr2R 17783575 17783617 pogo 8 1229 3.0 5.0 4.0 1.6 1271 chr2R 17782346 intergenic CG33981 -,fab1 - chr2R 17782982 intergenic not near genes chr2R 17783617 intergenic mir-31a - chr2R_8_17780001 chr2R_17780001 CanS-JC 830 chr2R 17784001 17784054 chr2R 17784268 17784320 pogo 8 266 10.5 5.5 8.0 0.9 319 chr2R 17784001 intergenic mir-31a - chr2R 17784160 intergenic mir-31a - chr2R 17784320 intergenic mir-31a - chr2R_8_17780001 chr2R_17780001 CanS-JC 831 chr2R 17918146 17918163 chr2R 17918249 17918266 6 103 13.0 0.0 6.5 0.8 120 chr2R 17918146 intron Elk + chr2R 17918206 intron Elk + chr2R 17918266 intron Elk + chr2R_6_17915001 chr2R_17915001 CanS-JC 832 chr2R 17921435 17921460 chr2R 17921543 17921568 8 108 2.0 5.5 3.8 1.7 133 chr2R 17921435 intron Elk + chr2R 17921502 intron Elk + chr2R 17921568 intron Elk + chr2R_8_17920001 chr2R_17920001 CanS-JC 833 chr2R 18023140 18023197 chr2R 18023252 18023309 29 112 2.0 3.5 2.8 7.6 169 chr2R 18023140 intergenic not near genes chr2R 18023224 intergenic not near genes chr2R 18023309 intergenic not near genes chr2R_29_18020001 chr2R_18020001 CanS-JC 834 chr2R 18045649 18045690 chr2R 18046027 18046068 jockey 5 378 4.0 4.0 4.0 1.0 419 chr2R 18045649 intergenic not near genes chr2R 18045858 intergenic not near genes chr2R 18046068 intergenic CG5767 - chr2R_5_18045001 chr2R_18045001 CanS-JC 835 chr2R 18111665 18111714 chr2R 18115559 18115601 F-element 18 3893 4.0 2.5 3.2 4.3 3936 chr2R 18111665 intergenic not near genes chr2R 18113633 intergenic not near genes chr2R 18115601 intergenic not near genes chr2R_18_18110001 chr2R_18110001 CanS-JC 836 chr2R 18127367 18127371 chr2R 18127508 18127510 4 140 0.0 8.5 4.2 0.8 143 chr2R 18127367 intron Spn55B + chr2R 18127438 intron Spn55B + chr2R 18127510 intron Spn55B + chr2R_4_18125001 chr2R_18125001 CanS-JC 837 chr2R 18308257 18308318 chr2R 18308389 18308450 20 132 3.5 3.5 3.5 4.4 193 chr2R 18308257 intron sbb - chr2R 18308354 intron sbb - chr2R 18308450 intron sbb - chr2R_20_18305001 chr2R_18305001 CanS-JC 838 chr2R 18320054 18320065 chr2R 18320193 18320204 6 139 6.0 0.0 3.0 1.5 150 chr2R 18320054 intron sbb - chr2R 18320129 intron sbb - chr2R 18320204 intron sbb - chr2R_6_18320001 chr2R_18320001 CanS-JC 839 chr2R 18358377 18358415 chr2R 18372615 18372653 roo 9 14238 3.5 8.5 6.0 1.3 14276 chr2R 18358377 intergenic not near genes chr2R 18365515 intergenic not near genes chr2R 18372653 intergenic not near genes chr2R_9_18365001 chr2R_18365001 CanS-JC 840 chr2R 18376719 18376749 chr2R 18376835 18376865 9 116 2.5 7.0 4.8 1.6 146 chr2R 18376719 intergenic not near genes chr2R 18376792 intergenic not near genes chr2R 18376865 intergenic not near genes chr2R_9_18375001 chr2R_18375001 CanS-JC 841 chr2R 18390853 18390896 chr2R 18390966 18391009 5 113 4.5 7.0 5.8 0.7 156 chr2R 18390853 intergenic CG15068 - chr2R 18390931 intergenic CG15068 - chr2R 18391009 intergenic CG15068 - chr2R_5_18390001 chr2R_18390001 CanS-JC 842 chr2R 18405727 18405778 chr2R 18405834 18405884 9 106 0.5 0.0 0.2 7.5 157 chr2R 18405727 intergenic GstE6 +,GstE5 + chr2R 18405806 intergenic GstE6 +,GstE5 + chr2R 18405884 intergenic GstE6 + chr2R_9_18405001 chr2R_18405001 CanS-JC 843 chr2R 18408263 18408305 chr2R 18408410 18408452 13 147 7.5 3.5 5.5 2.0 189 chr2R 18408263 exon GstE8 + chr2R 18408358 exon GstE8 + chr2R 18408452 exon GstE8 + chr2R_13_18405001 chr2R_18405001 CanS-JC 844 chr2R 18463682 18463691 chr2R 18463809 18463818 4 127 9.0 4.0 6.5 0.5 136 chr2R 18463682 intron CG30116 - chr2R 18463750 intron CG30116 - chr2R 18463818 intron CG30116 - chr2R_4_18460001 chr2R_18460001 CanS-JC 845 chr2R 18477740 18477763 chr2R 18477821 18477872 8 105 0.0 4.0 2.0 2.7 132 chr2R 18477740 intron CG30116 - chr2R 18477806 intron CG30116 - chr2R 18477872 intron CG30116 - chr2R_8_18475001 chr2R_18475001 CanS-JC 846 chr2R 18486830 18486878 chr2R 18487118 18487164 10 288 4.0 7.0 5.5 1.5 334 chr2R 18486830 intron CG30116 - chr2R 18486997 intron CG30116 - chr2R 18487164 intron CG30116 - chr2R_10_18485001 chr2R_18485001 CanS-JC 847 chr2R 18519920 18519974 chr2R 18520023 18520077 14 103 8.5 4.0 6.2 1.9 157 chr2R 18519920 intron CG43066 + chr2R 18519998 intron CG43066 + chr2R 18520077 intron CG43066 + chr2R_14_18515001 chr2R_18515001 CanS-JC 848 chr2R 18550552 18550609 chr2R 18550667 18550724 22 115 4.0 3.0 3.5 4.9 172 chr2R 18550552 intergenic not near genes chr2R 18550638 intergenic not near genes chr2R 18550724 intergenic not near genes chr2R_22_18550001 chr2R_18550001 CanS-JC 849 chr2R 18575124 18575153 chr2R 18575367 18575396 9 243 3.5 3.0 3.2 2.1 272 chr2R 18575124 intron GEFmeso - chr2R 18575260 intron GEFmeso - chr2R 18575396 intron GEFmeso - chr2R_9_18575001 chr2R_18575001 CanS-JC 850 chr2R 18575770 18575826 chr2R 18581984 18582040 3S18 14 6200 6.0 7.5 6.8 1.8 6270 chr2R 18575770 intron GEFmeso - chr2R 18578905 intron GEFmeso - chr2R 18582040 intron GEFmeso - chr2R_14_18575001 chr2R_18575001 CanS-JC 851 chr2R 18590842 18590898 chr2R 18600020 18600076 roo 14 9178 4.5 6.5 5.5 2.2 9234 chr2R 18590842 intron GEFmeso - chr2R 18595459 intron GEFmeso - chr2R 18600076 intron GEFmeso - chr2R_14_18595001 chr2R_18595001 CanS-JC 852 chr2R 18692878 18692906 chr2R 18692991 18693019 8 113 5.0 1.0 3.0 2.0 141 chr2R 18692878 intron Sik3 + chr2R 18692948 intron Sik3 + chr2R 18693019 intron Sik3 + chr2R_8_18690001 chr2R_18690001 CanS-JC 853 chr2R 18738200 18738234 chr2R 18738302 18738336 11 101 0.0 4.0 2.0 3.7 136 chr2R 18738200 intron Hs3st-A + chr2R 18738268 intron Hs3st-A + chr2R 18738336 intron Hs3st-A + chr2R_11_18735001 chr2R_18735001 CanS-JC 854 chr2R 18747256 18747317 chr2R 18747916 18747977 18 660 5.5 6.5 6.0 2.6 721 chr2R 18747256 intron Hs3st-A + chr2R 18747616 intron Hs3st-A + chr2R 18747977 intron Hs3st-A + chr2R_18_18745001 chr2R_18745001 CanS-JC 855 chr2R 18768912 18768954 chr2R 18769060 18769102 15 148 2.0 3.5 2.8 3.9 190 chr2R 18768912 exon Mctp + chr2R 18769007 intron Mctp + chr2R 18769102 intron Mctp + chr2R_15_18765001 chr2R_18765001 CanS-JC 856 chr2R 18800778 18800832 chr2R 18800892 18800946 19 112 3.0 3.0 3.0 4.8 168 chr2R 18800778 intron l(2)08717 - chr2R 18800862 intron l(2)08717 - chr2R 18800946 intron l(2)08717 - chr2R_19_18800001 chr2R_18800001 CanS-JC 857 chr2R 18808132 18808187 chr2R 18808234 18808289 15 102 1.5 2.0 1.8 5.4 157 chr2R 18808132 intergenic CG15096 - chr2R 18808210 intergenic CG15096 - chr2R 18808289 intergenic CG15096 - chr2R_15_18805001 chr2R_18805001 CanS-JC 858 chr2R 18828809 18828824 chr2R 18828911 18828926 10 102 0.0 6.0 3.0 2.5 117 chr2R 18828809 intron CG15097 - chr2R 18828868 intron CG15097 - chr2R 18828926 intron CG15097 - chr2R_10_18825001 chr2R_18825001 CanS-JC 859 chr2R 18835876 18835912 chr2R 18835984 18836017 7 107 7.0 0.0 3.5 1.6 141 chr2R 18835876 intron CG15083 + chr2R 18835946 intron CG15083 + chr2R 18836017 intron CG15083 + chr2R_7_18835001 chr2R_18835001 CanS-JC 860 chr2R 18871620 18871679 chr2R 18871731 18871783 13 108 1.5 1.5 1.5 5.2 163 chr2R 18871620 intergenic not near genes chr2R 18871702 intergenic not near genes chr2R 18871783 intergenic not near genes chr2R_13_18870001 chr2R_18870001 CanS-JC 861 chr2R 18926483 18926530 chr2R 18926596 18926643 9 113 2.0 0.0 1.0 4.5 160 chr2R 18926483 intron sano + chr2R 18926563 intron sano + chr2R 18926643 intron sano + chr2R_9_18925001 chr2R_18925001 CanS-JC 862 chr2R 18930434 18930483 chr2R 18930553 18930602 12 119 4.0 5.5 4.8 2.1 168 chr2R 18930434 intron sano + chr2R 18930518 intron sano + chr2R 18930602 intron sano + chr2R_12_18930001 chr2R_18930001 CanS-JC 863 chr2R 18953162 18953181 chr2R 18953275 18953294 10 113 5.0 3.5 4.2 1.9 132 chr2R 18953162 intron sano + chr2R 18953228 intron sano + chr2R 18953294 intron sano + chr2R_10_18950001 chr2R_18950001 CanS-JC 864 chr2R 18988993 18989046 chr2R 18989097 18989150 13 104 0.0 4.5 2.2 4.1 157 chr2R 18988993 intron tn + chr2R 18989072 intron tn + chr2R 18989150 intron tn + chr2R_13_18985001 chr2R_18985001 CanS-JC 865 chr2R 18991994 18992048 chr2R 18992161 18992211 18 167 3.5 9.0 6.2 2.5 217 chr2R 18991994 intron tn + chr2R 18992102 intron tn + chr2R 18992211 intron tn + chr2R_18_18990001 chr2R_18990001 CanS-JC 866 chr2R 19010718 19010774 chr2R 19010861 19010917 14 143 4.0 3.5 3.8 2.9 199 chr2R 19010718 intergenic not near genes chr2R 19010818 intergenic not near genes chr2R 19010917 intergenic not near genes chr2R_14_19010001 chr2R_19010001 CanS-JC 867 chr2R 19012917 19012956 chr2R 19013037 19013076 12 120 5.5 7.0 6.2 1.7 159 chr2R 19012917 intergenic not near genes chr2R 19012996 intergenic not near genes chr2R 19013076 intergenic not near genes chr2R_12_19010001 chr2R_19010001 CanS-JC 868 chr2R 19026025 19026051 chr2R 19026191 19026217 9 166 6.0 4.0 5.0 1.5 192 chr2R 19026025 intron 5-HT1B - chr2R 19026121 intron 5-HT1B - chr2R 19026217 intron 5-HT1B - chr2R_9_19025001 chr2R_19025001 CanS-JC 869 chr2R 19128456 19128509 chr2R 19128572 19128624 4 116 0.0 0.0 0.0 4.0 168 chr2R 19128456 intron CG15117 - chr2R 19128540 intron CG15117 - chr2R 19128624 intron CG15117 - chr2R_4_19125001 chr2R_19125001 CanS-JC 870 chr2R 19218856 19218884 chr2R 19227537 19227565 7 8681 36.5 23.5 30.0 0.2 8709 chr2R 19218856 intron hppy + chr2R 19223210 intron hppy + chr2R 19227565 exon CG7137 + chr2R_7_19220001 chr2R_19220001 CanS-JC 871 chr2R 19233886 19233918 chr2R 19234085 19234117 9 198 6.5 6.5 6.5 1.2 231 chr2R 19233886 intron cora + chr2R 19234002 intron cora + chr2R 19234117 intron cora + chr2R_9_19230001 chr2R_19230001 CanS-JC 872 chr2R 19295693 19295737 chr2R 19295800 19295844 10 107 4.0 5.0 4.5 1.8 151 chr2R 19295693 intron Tab2 + chr2R 19295768 intron Tab2 + chr2R 19295844 intron Tab2 + chr2R_10_19295001 chr2R_19295001 CanS-JC 873 chr2R 19300942 19300989 chr2R 19301051 19301098 15 109 2.5 7.0 4.8 2.6 156 chr2R 19300942 intron Tab2 + chr2R 19301020 intron Tab2 + chr2R 19301098 intron Tab2 + chr2R_15_19300001 chr2R_19300001 CanS-JC 874 chr2R 19362814 19362855 chr2R 19362920 19362961 19 106 5.5 1.0 3.2 4.5 147 chr2R 19362814 intergenic CG11961 + chr2R 19362888 intergenic not near genes chr2R 19362961 intergenic not near genes chr2R_19_19360001 chr2R_19360001 CanS-JC 875 chr2R 19555002 19555053 chr2R 19555321 19555372 10 319 1.0 4.0 2.5 2.9 370 chr2R 19555002 intron sm - chr2R 19555187 intron sm - chr2R 19555372 intron sm - chr2R_10_19555001 chr2R_19555001 CanS-JC 876 chr2R 19555553 19555612 chr2R 19555663 19555722 26 108 2.0 4.0 3.0 6.5 169 chr2R 19555553 intron sm - chr2R 19555638 intron sm - chr2R 19555722 intron sm - chr2R_26_19555001 chr2R_19555001 CanS-JC 877 chr2R 19588728 19588781 chr2R 19588832 19588885 15 103 2.0 2.0 2.0 5.0 157 chr2R 19588728 intron sm - chr2R 19588806 intron sm - chr2R 19588885 intron sm - chr2R_15_19585001 chr2R_19585001 CanS-JC 878 chr2R 19715834 19715853 chr2R 19723329 19723348 blood 5 7495 10.0 8.0 9.0 0.5 7514 chr2R 19715834 intergenic not near genes chr2R 19719591 intergenic not near genes chr2R 19723348 intergenic not near genes chr2R_5_19715001 chr2R_19715001 CanS-JC 879 chr2R 19774006 19774027 chr2R 19774145 19774166 5 139 6.5 4.5 5.5 0.8 160 chr2R 19774006 intergenic not near genes chr2R 19774086 intergenic not near genes chr2R 19774166 intergenic not near genes chr2R_5_19770001 chr2R_19770001 CanS-JC 880 chr2R 19776569 19776623 chr2R 19779918 19779972 jockey 16 3349 3.0 3.5 3.2 3.8 3403 chr2R 19776569 intergenic not near genes chr2R 19778270 intergenic not near genes chr2R 19779972 intergenic not near genes chr2R_16_19775001 chr2R_19775001 CanS-JC 881 chr2R 19914823 19914872 chr2R 19922261 19922310 mdg1 11 7438 6.0 3.5 4.8 1.9 7487 chr2R 19914823 intergenic not near genes chr2R 19918566 intergenic not near genes chr2R 19922310 intergenic not near genes chr2R_11_19915001 chr2R_19915001 CanS-JC 882 chr2R 19957406 19957459 chr2R 19962633 19962687 copia 12 5227 4.5 6.5 5.5 1.8 5281 chr2R 19957406 intergenic CG44623 + chr2R 19960046 intergenic not near genes chr2R 19962687 intergenic not near genes chr2R_12_19960001 chr2R_19960001 CanS-JC 883 chr2R 20069225 20069258 chr2R 20071889 20071914 opus 11 2662 0.0 2.5 1.2 5.0 2689 chr2R 20069225 intergenic not near genes chr2R 20070570 intergenic not near genes chr2R 20071914 intergenic not near genes chr2R_11_20070001 chr2R_20070001 CanS-JC 884 chr2R 20080601 20080617 chr2R 20080704 20080720 5 103 0.0 9.5 4.8 0.9 119 chr2R 20080601 intergenic not near genes chr2R 20080660 intergenic not near genes chr2R 20080720 intergenic not near genes chr2R_5_20080001 chr2R_20080001 CanS-JC 885 chr2R 20127173 20127224 chr2R 20127335 20127386 9 162 4.5 6.0 5.2 1.5 213 chr2R 20127173 intergenic not near genes chr2R 20127280 intergenic not near genes chr2R 20127386 intergenic not near genes chr2R_9_20125001 chr2R_20125001 CanS-JC 886 chr2R 20338735 20338754 chr2R 20338841 20338860 7 106 1.0 0.0 0.5 4.7 125 chr2R 20338735 intergenic not near genes chr2R 20338798 intergenic not near genes chr2R 20338860 intergenic not near genes chr2R_7_20335001 chr2R_20335001 CanS-JC 887 chr2R 20502260 20502310 chr2R 20502400 20502450 24 140 1.5 5.5 3.5 5.3 190 chr2R 20502260 intergenic not near genes chr2R 20502355 intergenic not near genes chr2R 20502450 intergenic not near genes chr2R_24_20500001 chr2R_20500001 CanS-JC 888 chr2R 20510323 20510363 chr2R 20510673 20510713 11 350 2.5 8.0 5.2 1.8 390 chr2R 20510323 intergenic not near genes chr2R 20510518 intergenic not near genes chr2R 20510713 intergenic CR44648 + chr2R_11_20510001 chr2R_20510001 CanS-JC 889 chr2R 20523017 20523069 chr2R 20523154 20523206 13 137 5.0 6.5 5.8 1.9 189 chr2R 20523017 intergenic not near genes chr2R 20523112 intergenic not near genes chr2R 20523206 intergenic not near genes chr2R_13_20520001 chr2R_20520001 CanS-JC 890 chr2R 20555308 20555315 chr2R 20555418 20555425 4 110 4.5 2.5 3.5 0.9 117 chr2R 20555308 intergenic not near genes chr2R 20555366 intergenic not near genes chr2R 20555425 intergenic not near genes chr2R_4_20555001 chr2R_20555001 CanS-JC 891 chr2R 20572553 20572583 chr2R 20572669 20572699 9 116 10.5 4.0 7.2 1.1 146 chr2R 20572553 intron qsm - chr2R 20572626 intron qsm - chr2R 20572699 intron qsm - chr2R_9_20570001 chr2R_20570001 CanS-JC 892 chr2R 20702651 20702700 chr2R 20702753 20702802 10 102 3.0 4.5 3.8 2.1 151 chr2R 20702651 intron dpr + chr2R 20702726 intron dpr + chr2R 20702802 intron dpr + chr2R_10_20700001 chr2R_20700001 CanS-JC 893 chr2R 20723639 20723689 chr2R 20723817 20723867 8 178 6.5 7.0 6.8 1.0 228 chr2R 20723639 intron dpr + chr2R 20723753 intron dpr + chr2R 20723867 intron dpr + chr2R_8_20720001 chr2R_20720001 CanS-JC 894 chr2R 20739417 20739476 chr2R 20744211 20744255 F-element 17 4793 6.0 6.5 6.2 2.4 4838 chr2R 20739417 intron dpr + chr2R 20741836 intron dpr + chr2R 20744255 intron dpr + chr2R_17_20740001 chr2R_20740001 CanS-JC 895 chr2R 20757445 20757458 chr2R 20757548 20757561 7 103 6.5 9.0 7.8 0.8 116 chr2R 20757445 intergenic not near genes chr2R 20757503 intergenic not near genes chr2R 20757561 intergenic not near genes chr2R_7_20755001 chr2R_20755001 CanS-JC 896 chr2R 20776508 20776556 chr2R 20776612 20776659 5 103 4.0 0.5 2.2 1.6 151 chr2R 20776508 intergenic CG43709 -,CG43710 - chr2R 20776584 intergenic CG43710 -,CG43709 - chr2R 20776659 intergenic CG43710 -,CG43709 - chr2R_5_20775001 chr2R_20775001 CanS-JC 897 chr2R 20783285 20783325 chr2R 20788083 20788118 F-element 15 4798 4.5 5.5 5.0 2.5 4833 chr2R 20783285 intergenic not near genes chr2R 20785702 intergenic not near genes chr2R 20788118 intergenic CG43666 - chr2R_15_20785001 chr2R_20785001 CanS-JC 898 chr2R 20912333 20912356 chr2R 20912444 20912467 12 111 2.5 6.0 4.2 2.3 134 chr2R 20912333 intergenic not near genes chr2R 20912400 intergenic not near genes chr2R 20912467 intergenic not near genes chr2R_12_20910001 chr2R_20910001 CanS-JC 899 chr2R 20927701 20927743 chr2R 20927805 20927847 18 103 2.5 4.0 3.2 4.3 146 chr2R 20927701 intron Rx + chr2R 20927774 intron Rx + chr2R 20927847 intron Rx + chr2R_18_20925001 chr2R_20925001 CanS-JC 900 chr2R 20931251 20931269 chr2R 20931378 20931396 11 127 5.5 5.5 5.5 1.7 145 chr2R 20931251 intron Rx + chr2R 20931324 intron Rx + chr2R 20931396 intron Rx + chr2R_11_20930001 chr2R_20930001 CanS-JC 901 chr2R 20962881 20962935 chr2R 20963005 20963059 20 123 4.0 5.5 4.8 3.4 178 chr2R 20962881 intergenic not near genes chr2R 20962970 intergenic not near genes chr2R 20963059 intergenic not near genes chr2R_20_20960001 chr2R_20960001 CanS-JC 902 chr2R 20967000 20967041 chr2R 20967103 20967144 11 103 9.0 0.5 4.8 1.9 144 chr2R 20967000 intergenic not near genes chr2R 20967072 intergenic not near genes chr2R 20967144 intergenic not near genes chr2R_11_20965001 chr2R_20965001 CanS-JC 903 chr2R 21136873 21136911 chr2R 21136983 21137021 10 110 9.0 2.5 5.8 1.5 148 chr2R 21136873 intron Magi - chr2R 21136947 intron Magi - chr2R 21137021 intron Magi - chr2R_10_21135001 chr2R_21135001 CanS-JC 904 chr2R 21151136 21151145 chr2R 21153795 21153804 opus 4 2659 0.0 10.0 5.0 0.7 2668 chr2R 21151136 intron CG30389 - chr2R 21152470 intron CG30389 - chr2R 21153804 intron CG30389 - chr2R_4_21150001 chr2R_21150001 CanS-JC 905 chr2R 21193981 21194033 chr2R 21194090 21194144 17 111 3.0 6.0 4.5 3.1 163 chr2R 21193981 intron Lapsyn + chr2R 21194062 intron Lapsyn + chr2R 21194144 intron Lapsyn + chr2R_17_21190001 chr2R_21190001 CanS-JC 906 chr2R 21232619 21232660 chr2R 21232815 21232856 7 196 6.0 0.0 3.0 1.8 237 chr2R 21232619 intron ASPP - chr2R 21232738 intron ASPP - chr2R 21232856 intron ASPP - chr2R_7_21230001 chr2R_21230001 CanS-JC 907 chr2R 21247488 21247521 chr2R 21247996 21248029 8 508 8.0 4.0 6.0 1.1 541 chr2R 21247488 intron ASPP - chr2R 21247758 intron ASPP - chr2R 21248029 intron ASPP - chr2R_8_21245001 chr2R_21245001 CanS-JC 908 chr2R 21251797 21251850 chr2R 21252049 21252103 15 253 4.0 3.5 3.8 3.1 306 chr2R 21251797 intergenic not near genes chr2R 21251950 intergenic not near genes chr2R 21252103 intergenic not near genes chr2R_15_21250001 chr2R_21250001 CanS-JC 909 chr2R 21259639 21259663 chr2R 21259744 21259768 4 105 11.0 17.5 14.2 0.3 129 chr2R 21259639 intron Rgk3 + chr2R 21259704 intron Rgk3 + chr2R 21259768 intron Rgk3 + chr2R_4_21255001 chr2R_21255001 CanS-JC 910 chr2R 21285416 21285428 chr2R 21285519 21285531 9 102 6.0 12.5 9.2 0.9 115 chr2R 21285416 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285474 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285531 3` UTR,3` UTR MFS16 +,CG10505 - chr2R_9_21285001 chr2R_21285001 CanS-JC 911 chr2R 21322917 21322966 chr2R 21323027 21323076 11 110 9.0 7.0 8.0 1.2 159 chr2R 21322917 5` UTR CG30394 - chr2R 21322996 5` UTR CG30394 - chr2R 21323076 intron CG30394 - chr2R_11_21320001 chr2R_21320001 CanS-JC 912 chr2R 21363113 21363184 chr2R 21363237 21363299 8 118 0.0 0.0 0.0 8.0 186 chr2R 21363113 intron cv-2 - chr2R 21363206 intron cv-2 - chr2R 21363299 intron cv-2 - chr2R_8_21360001 chr2R_21360001 CanS-JC 913 chr2R 21380171 21380208 chr2R 21380347 21380393 19 182 4.5 3.0 3.8 4.0 222 chr2R 21380171 intergenic not near genes chr2R 21380282 intergenic not near genes chr2R 21380393 intergenic not near genes chr2R_19_21380001 chr2R_21380001 CanS-JC 914 chr2R 21490106 21490153 chr2R 21490214 21490261 13 108 2.0 0.5 1.2 5.9 155 chr2R 21490106 intron Fkbp14 - chr2R 21490184 intron Fkbp14 - chr2R 21490261 intron Fkbp14 - chr2R_13_21490001 chr2R_21490001 CanS-JC 915 chr2R 21505739 21505794 chr2R 21505846 21505901 21 107 1.5 5.5 3.5 4.7 162 chr2R 21505739 intron MESK2 + chr2R 21505820 intron MESK2 + chr2R 21505901 intron MESK2 + chr2R_21_21505001 chr2R_21505001 CanS-JC 916 chr2R 21585202 21585248 chr2R 21585307 21585353 8 105 1.5 5.0 3.2 1.9 151 chr2R 21585202 3` UTR CG30222 + chr2R 21585278 3` UTR CG30222 + chr2R 21585353 3` UTR CG30222 + chr2R_8_21585001 chr2R_21585001 CanS-JC 917 chr2R 21592819 21592849 chr2R 21592928 21592958 6 109 9.5 9.0 9.2 0.6 139 chr2R 21592819 intergenic not near genes chr2R 21592888 intergenic not near genes chr2R 21592958 intergenic not near genes chr2R_6_21590001 chr2R_21590001 CanS-JC 918 chr2R 21721554 21721611 chr2R 21721668 21721725 17 114 4.5 5.0 4.8 2.9 171 chr2R 21721554 intron LBR + chr2R 21721640 intron LBR + chr2R 21721725 intron LBR + chr2R_17_21720001 chr2R_21720001 CanS-JC 919 chr2R 21725204 21725220 chr2R 21725307 21725323 6 102 0.0 3.0 1.5 2.4 119 chr2R 21725204 intergenic not near genes chr2R 21725264 intergenic not near genes chr2R 21725323 intergenic not near genes chr2R_6_21725001 chr2R_21725001 CanS-JC 920 chr2R 21738253 21738310 chr2R 21747439 21747445 roo 10 9181 3.0 2.5 2.8 2.6 9192 chr2R 21738253 intergenic not near genes chr2R 21742849 intergenic not near genes chr2R 21747445 intergenic not near genes chr2R_10_21740001 chr2R_21740001 CanS-JC 921 chr2R 21753061 21753115 chr2R 21753572 21753626 roo 22 511 4.5 5.0 4.8 3.8 565 chr2R 21753061 intergenic not near genes chr2R 21753344 intergenic not near genes chr2R 21753626 intergenic not near genes chr2R_22_21750001 chr2R_21750001 CanS-JC 922 chr2R 21766360 21766368 chr2R 21766813 21766821 6 453 0.0 9.0 4.5 1.1 461 chr2R 21766360 intron CG30395 + chr2R 21766590 intron CG30395 + chr2R 21766821 intron CG30395 + chr2R_6_21765001 chr2R_21765001 CanS-JC 923 chr2R 21785521 21785550 chr2R 21785625 21785654 12 104 0.0 8.0 4.0 2.4 133 chr2R 21785521 intergenic not near genes chr2R 21785588 intergenic not near genes chr2R 21785654 intergenic not near genes chr2R_12_21785001 chr2R_21785001 CanS-JC 924 chr2R 21796433 21796482 chr2R 21796543 21796593 15 110 3.0 4.5 3.8 3.1 160 chr2R 21796433 5` UTR CG34204 + chr2R 21796513 5` UTR CG34204 + chr2R 21796593 exon CG34204 + chr2R_15_21795001 chr2R_21795001 CanS-JC 925 chr2R 21809504 21809554 chr2R 21817770 21817817 roo 18 8266 5.5 2.5 4.0 3.6 8313 chr2R 21809504 intergenic not near genes chr2R 21813660 intergenic not near genes chr2R 21817817 intergenic not near genes chr2R_18_21810001 chr2R_21810001 CanS-JC 926 chr2R 21857322 21857371 chr2R 21857439 21857488 8 117 7.5 2.0 4.8 1.4 166 chr2R 21857322 intergenic not near genes chr2R 21857405 intergenic not near genes chr2R 21857488 intergenic not near genes chr2R_8_21855001 chr2R_21855001 CanS-JC 927 chr2R 21889273 21889310 chr2R 21889521 21889559 6 249 6.5 0.0 3.2 1.4 286 chr2R 21889273 intron Fili + chr2R 21889416 intron Fili + chr2R 21889559 intron Fili + chr2R_6_21885001 chr2R_21885001 CanS-JC 928 chr2R 21906244 21906299 chr2R 21906372 21906426 13 127 5.0 2.0 3.5 2.9 182 chr2R 21906244 intron Fili + chr2R 21906335 intron Fili + chr2R 21906426 intron Fili + chr2R_13_21905001 chr2R_21905001 CanS-JC 929 chr2R 21911818 21911868 chr2R 21911951 21912001 23 133 5.0 5.5 5.2 3.7 183 chr2R 21911818 intron Fili + chr2R 21911910 intron Fili + chr2R 21912001 intron Fili + chr2R_23_21910001 chr2R_21910001 CanS-JC 930 chr2R 21963177 21963218 chr2R 21963288 21963329 5 111 3.5 6.5 5.0 0.8 152 chr2R 21963177 intergenic not near genes chr2R 21963253 intergenic not near genes chr2R 21963329 intergenic not near genes chr2R_5_21960001 chr2R_21960001 CanS-JC 931 chr2R 22003069 22003112 chr2R 22003179 22003224 19 112 3.5 5.0 4.2 3.7 155 chr2R 22003069 intron CG34370 - chr2R 22003146 intron CG34370 - chr2R 22003224 intron CG34370 - chr2R_19_22000001 chr2R_22000001 CanS-JC 932 chr2R 22017386 22017412 chr2R 22018742 22018768 7 1356 24.5 8.0 16.2 0.4 1382 chr2R 22017386 intron CG34370 - chr2R 22018077 intron CG34370 - chr2R 22018768 intron CG34370 - chr2R_7_22015001 chr2R_22015001 CanS-JC 933 chr2R 22017250 22017300 chr2R 22018643 22018693 12 1393 38.5 14.5 26.5 0.4 1443 chr2R 22017250 intron CG34370 - chr2R 22017972 intron CG34370 - chr2R 22018693 intron CG34370 - chr2R_12_22015001 chr2R_22015001 CanS-JC 934 chr2R 22029455 22029492 chr2R 22029618 22029656 6 163 5.5 2.5 4.0 1.2 201 chr2R 22029455 intron CG34370 - chr2R 22029556 intron CG34370 - chr2R 22029656 intron CG34370 - chr2R_6_22025001 chr2R_22025001 CanS-JC 935 chr2R 22040127 22040185 chr2R 22040234 22040292 14 104 7.5 7.0 7.2 1.7 165 chr2R 22040127 intergenic not near genes chr2R 22040210 intergenic not near genes chr2R 22040292 intergenic not near genes chr2R_14_22040001 chr2R_22040001 CanS-JC 936 chr2R 22072682 22072710 chr2R 22072793 22072821 7 111 1.0 3.0 2.0 2.3 139 chr2R 22072682 intron CG11474 - chr2R 22072752 intron CG11474 - chr2R 22072821 exon CG11474 - chr2R_7_22070001 chr2R_22070001 CanS-JC 937 chr2R 22099851 22099882 chr2R 22099958 22099989 9 107 2.5 4.0 3.2 2.1 138 chr2R 22099851 intergenic CG11073 - chr2R 22099920 intergenic CG11073 - chr2R 22099989 intergenic CG11073 - chr2R_9_22095001 chr2R_22095001 CanS-JC 938 chr2R 22178737 22178743 chr2R 22178850 22178856 4 113 2.5 5.0 3.8 0.8 119 chr2R 22178737 intron CG11170 - chr2R 22178796 intron CG11170 - chr2R 22178856 intron CG11170 - chr2R_4_22175001 chr2R_22175001 CanS-JC 939 chr2R 22208574 22208621 chr2R 22208961 22209008 22 387 4.0 6.5 5.2 3.5 434 chr2R 22208574 3` UTR CG3264 - chr2R 22208791 3` UTR CG3264 - chr2R 22209008 exon CG3264 - chr2R_22_22205001 chr2R_22205001 CanS-JC 940 chr2R 22290056 22290076 chr2R 22290166 22290186 6 110 8.0 1.0 4.5 1.1 130 chr2R 22290056 intergenic not near genes chr2R 22290121 intergenic not near genes chr2R 22290186 intergenic not near genes chr2R_6_22290001 chr2R_22290001 CanS-JC 941 chr2R 22349671 22349717 chr2R 22351481 22351527 jockey 14 1809 7.5 8.0 7.8 1.6 1856 chr2R 22349671 intron Liprin-gamma - chr2R 22350599 intron Liprin-gamma - chr2R 22351527 intron Liprin-gamma - chr2R_14_22350001 chr2R_22350001 CanS-JC 942 chr2R 22374612 22374634 chr2R 22374725 22374747 9 113 1.5 3.0 2.2 2.8 135 chr2R 22374612 3` UTR CR44759 - chr2R 22374680 3` UTR CR44759 - chr2R 22374747 3` UTR CR44759 - chr2R_9_22370001 chr2R_22370001 CanS-JC 943 chr2R 22377784 22377835 chr2R 22377896 22377944 9 111 1.5 3.0 2.2 2.8 160 chr2R 22377784 3` UTR Rtf1 + chr2R 22377864 3` UTR Rtf1 + chr2R 22377944 3` UTR Rtf1 + chr2R_9_22375001 chr2R_22375001 CanS-JC 944 chr2R 22465294 22465347 chr2R 22465513 22465571 BS 5 220 5.5 4.0 4.8 0.9 277 chr2R 22465294 intron CG10384 + chr2R 22465432 intron CG10384 + chr2R 22465571 intron CG10384 + chr2R_5_22465001 chr2R_22465001 CanS-JC 945 chr2R 22525726 22525782 chr2R 22529307 22529337 jockey 10 3578 4.0 8.5 6.2 1.4 3611 chr2R 22525726 intron px - chr2R 22527532 intron px - chr2R 22529337 intron px - chr2R_10_22525001 chr2R_22525001 CanS-JC 946 chr2R 22580416 22580445 chr2R 22586586 22586615 diver 8 6170 5.0 3.5 4.2 1.5 6199 chr2R 22580416 intron dnr1 - chr2R 22583516 intron dnr1 - chr2R 22586615 intron dnr1 - chr2R_8_22580001 chr2R_22580001 CanS-JC 947 chr2R 22588123 22588148 chr2R 22588244 22588269 7 121 12.0 8.5 10.2 0.6 146 chr2R 22588123 intron dnr1 - chr2R 22588196 intron dnr1 - chr2R 22588269 intron dnr1 - chr2R_7_22585001 chr2R_22585001 CanS-JC 948 chr2R 22620802 22620858 chr2R 22620928 22620983 17 126 2.5 4.0 3.2 4.0 181 chr2R 22620802 5` UTR CG33143 + chr2R 22620892 5` UTR CG33143 + chr2R 22620983 5` UTR CG33143 + chr2R_17_22620001 chr2R_22620001 CanS-JC 949 chr2R 22623430 22623471 chr2R 22623596 22623637 8 166 5.5 11.5 8.5 0.8 207 chr2R 22623430 intron CG33143 + chr2R 22623534 intron CG33143 + chr2R 22623637 intron CG33143 + chr2R_8_22620001 chr2R_22620001 CanS-JC 950 chr2R 22662238 22662274 chr2R 22662365 22662401 10 125 6.0 3.5 4.8 1.7 163 chr2R 22662238 intron CG42566 + chr2R 22662320 intron CG42566 + chr2R 22662401 intron CG42566 + chr2R_10_22660001 chr2R_22660001 CanS-JC 951 chr2R 22729434 22729452 chr2R 22729668 22729686 INE-1 4 233 10.0 4.0 7.0 0.5 252 chr2R 22729434 intron jbug - chr2R 22729560 intron jbug - chr2R 22729686 intron jbug - chr2R_4_22725001 chr2R_22725001 CanS-JC 952 chr2R 22756528 22756582 chr2R 22756631 22756671 15 102 7.0 4.5 5.8 2.2 143 chr2R 22756528 intron,intron CG42260 -,CR30267 + chr2R 22756600 intron,intron CG42260 -,CR30267 + chr2R 22756671 intron,intron CG42260 -,CR30267 + chr2R_15_22755001 chr2R_22755001 CanS-JC 953 chr2R 22774942 22774993 chr2R 22775387 22775438 jockey 14 445 6.5 5.0 5.8 2.1 496 chr2R 22774942 intron CG42260 - chr2R 22775190 intron CG42260 - chr2R 22775438 intron CG42260 - chr2R_14_22775001 chr2R_22775001 CanS-JC 954 chr2R 22780630 22780677 chr2R 22780762 22780809 6 132 5.5 5.0 5.2 1.0 179 chr2R 22780630 intron CG42260 - chr2R 22780720 intron CG42260 - chr2R 22780809 intron CG42260 - chr2R_6_22780001 chr2R_22780001 CanS-JC 955 chr2R 22787579 22787582 chr2R 22787738 22787741 4 158 3.0 3.0 3.0 1.0 162 chr2R 22787579 intron CG42260 - chr2R 22787660 intron CG42260 - chr2R 22787741 intron CG42260 - chr2R_4_22785001 chr2R_22785001 CanS-JC 956 chr2R 22834768 22834794 chr2R 22834907 22834933 4 139 2.0 0.5 1.2 1.8 165 chr2R 22834768 intron CG12490 + chr2R 22834850 intron CG12490 + chr2R 22834933 intron CG12490 + chr2R_4_22830001 chr2R_22830001 CanS-JC 957 chr2R 22834919 22834923 chr2R 22837516 22837520 5 2597 0.0 20.5 10.2 0.4 2601 chr2R 22834919 intron CG12490 + chr2R 22836220 exon CG12490 + chr2R 22837520 intron CG9825 + chr2R_5_22835001 chr2R_22835001 CanS-JC 958 chr2R 22843024 22843044 chr2R 22844987 22845032 flea 8 1985 6.5 4.5 5.5 1.2 2008 chr2R 22843024 intergenic CG9826 + chr2R 22844028 intergenic not near genes chr2R 22845032 intergenic not near genes chr2R_8_22840001 chr2R_22840001 CanS-JC 959 chr2R 22945032 22945080 chr2R 22945172 22945220 23 140 5.5 7.0 6.2 3.2 188 chr2R 22945032 exon CG42694 + chr2R 22945126 3` UTR CG42694 + chr2R 22945220 intergenic CG42694 + chr2R_23_22945001 chr2R_22945001 CanS-JC 960 chr2R 22988295 22988323 chr2R 22988402 22988430 6 105 8.5 11.5 10.0 0.5 135 chr2R 22988295 intron twi + chr2R 22988362 intron twi + chr2R 22988430 intron twi + chr2R_6_22985001 chr2R_22985001 CanS-JC 961 chr2R 23031658 23031686 chr2R 23031768 23031796 11 109 4.0 7.0 5.5 1.7 138 chr2R 23031658 intron,intron twi +,CG42741 - chr2R 23031727 intron,intron twi +,CG42741 - chr2R 23031796 intron,intron twi +,CG42741 - chr2R_11_23030001 chr2R_23030001 CanS-JC 962 chr2R 23045326 23045361 chr2R 23045566 23045601 11 239 3.0 4.0 3.5 2.4 275 chr2R 23045326 intron twi + chr2R 23045464 intron twi + chr2R 23045601 intron twi + chr2R_11_23045001 chr2R_23045001 CanS-JC 963 chr2R 23052627 23052688 chr2R 23052729 23052789 16 102 6.0 6.5 6.2 2.2 162 chr2R 23052627 intergenic not near genes chr2R 23052708 intergenic not near genes chr2R 23052789 intergenic not near genes chr2R_16_23050001 chr2R_23050001 CanS-JC 964 chr2R 23061729 23061756 chr2R 23061872 23061897 8 143 2.0 9.5 5.8 1.2 168 chr2R 23061729 3` UTR l(2)06496 - chr2R 23061813 3` UTR l(2)06496 - chr2R 23061897 3` UTR l(2)06496 - chr2R_8_23060001 chr2R_23060001 CanS-JC 965 chr2R 23134819 23134840 chr2R 23134928 23134949 4 109 0.0 12.0 6.0 0.6 130 chr2R 23134819 intergenic not near genes chr2R 23134884 intergenic not near genes chr2R 23134949 intergenic not near genes chr2R_4_23130001 chr2R_23130001 CanS-JC 966 chr2R 23141670 23141700 chr2R 23141875 23141905 12 204 7.0 3.5 5.2 1.9 235 chr2R 23141670 intergenic Klp59D + chr2R 23141788 intergenic Klp59D + chr2R 23141905 intergenic Klp59D + chr2R_12_23140001 chr2R_23140001 CanS-JC 967 chr2R 23175020 23175064 chr2R 23175123 23175167 14 103 3.0 5.5 4.2 2.7 147 chr2R 23175020 intron CG34371 - chr2R 23175094 intron CG34371 - chr2R 23175167 intron CG34371 - chr2R_14_23175001 chr2R_23175001 CanS-JC 968 chr2R 23186067 23186114 chr2R 23186238 23186285 12 170 5.0 5.5 5.2 1.9 218 chr2R 23186067 intron CG34371 - chr2R 23186176 intron CG34371 - chr2R 23186285 intron CG34371 - chr2R_12_23185001 chr2R_23185001 CanS-JC 969 chr2R 23207830 23207853 chr2R 23207935 23207958 8 105 10.5 7.5 9.0 0.8 128 chr2R 23207830 intergenic not near genes chr2R 23207894 intergenic not near genes chr2R 23207958 intergenic not near genes chr2R_8_23205001 chr2R_23205001 CanS-JC 970 chr2R 23218989 23219003 chr2R 23219254 23219268 5 265 7.5 0.0 3.8 1.0 279 chr2R 23218989 intergenic not near genes chr2R 23219128 intergenic not near genes chr2R 23219268 intergenic not near genes chr2R_5_23215001 chr2R_23215001 CanS-JC 971 chr2R 23303826 23303875 chr2R 23304082 23304132 15 257 3.5 4.5 4.0 3.0 306 chr2R 23303826 intergenic not near genes chr2R 23303979 intergenic not near genes chr2R 23304132 intergenic not near genes chr2R_15_23300001 chr2R_23300001 CanS-JC 972 chr2R 23402585 23402638 chr2R 23407687 23407740 flea 15 5099 2.0 3.5 2.8 3.9 5155 chr2R 23402585 intergenic CG3520 - chr2R 23405162 intergenic not near genes chr2R 23407740 intergenic not near genes chr2R_15_23405001 chr2R_23405001 CanS-JC 973 chr2R 23407946 23407995 chr2R 23408227 23408276 17 281 5.5 4.0 4.8 2.9 330 chr2R 23407946 intergenic not near genes chr2R 23408111 intergenic not near genes chr2R 23408276 intergenic not near genes chr2R_17_23405001 chr2R_23405001 CanS-JC 974 chr2R 23421336 23421379 chr2R 23421452 23421495 10 116 2.5 2.5 2.5 2.9 159 chr2R 23421336 intergenic CG9815 - chr2R 23421416 intergenic CG9815 - chr2R 23421495 intergenic CG9815 - chr2R_10_23420001 chr2R_23420001 CanS-JC 975 chr2R 23461123 23461133 chr2R 23461226 23461236 5 103 11.0 11.5 11.2 0.4 113 chr2R 23461123 intron CG43795 + chr2R 23461180 intron CG43795 + chr2R 23461236 intron CG43795 + chr2R_5_23460001 chr2R_23460001 CanS-JC 976 chr2R 23463362 23463407 chr2R 23463467 23463512 25 104 5.0 5.0 5.0 4.2 150 chr2R 23463362 intron CG43795 + chr2R 23463437 intron CG43795 + chr2R 23463512 intron CG43795 + chr2R_25_23460001 chr2R_23460001 CanS-JC 977 chr2R 23467552 23467584 chr2R 23467707 23467737 9 155 4.0 7.5 5.8 1.3 185 chr2R 23467552 intron CG43795 + chr2R 23467644 intron CG43795 + chr2R 23467737 intron CG43795 + chr2R_9_23465001 chr2R_23465001 CanS-JC 978 chr2R 23493662 23493696 chr2R 23493753 23493808 8 109 4.5 9.0 6.8 1.0 146 chr2R 23493662 intergenic not near genes chr2R 23493735 intergenic not near genes chr2R 23493808 intergenic not near genes chr2R_8_23490001 chr2R_23490001 CanS-JC 979 chr2R 23508899 23508942 chr2R 23509042 23509085 14 143 4.0 3.0 3.5 3.1 186 chr2R 23508899 intergenic not near genes chr2R 23508992 intergenic not near genes chr2R 23509085 intergenic not near genes chr2R_14_23505001 chr2R_23505001 CanS-JC 980 chr2R 23529550 23529595 chr2R 23537152 23537197 412 15 7600 5.0 5.0 5.0 2.5 7647 chr2R 23529550 intron bw - chr2R 23533374 intron bw - chr2R 23537197 exon bw - chr2R_15_23530001 chr2R_23530001 CanS-JC 981 chr2R 23607156 23607188 chr2R 23607275 23607307 15 119 1.5 4.0 2.8 3.9 151 chr2R 23607156 intron CG17664 - chr2R 23607232 intron CG17664 - chr2R 23607307 intron CG17664 - chr2R_15_23605001 chr2R_23605001 CanS-JC 982 chr2R 23680221 23680254 chr2R 23680326 23680359 8 105 2.0 3.5 2.8 2.1 138 chr2R 23680221 3` UTR Pde8 + chr2R 23680290 3` UTR Pde8 + chr2R 23680359 3` UTR Pde8 + chr2R_8_23680001 chr2R_23680001 CanS-JC 983 chr2R 23721779 23721786 chr2R 23721888 23721896 6 110 7.5 14.0 10.8 0.5 117 chr2R 23721779 intron Sesn + chr2R 23721838 intron Sesn + chr2R 23721896 intron Sesn + chr2R_6_23720001 chr2R_23720001 CanS-JC 984 chr2R 23763570 23763584 chr2R 23763689 23763703 6 119 3.5 4.0 3.8 1.2 133 chr2R 23763570 intron CG9850 - chr2R 23763636 intron CG9850 - chr2R 23763703 intron CG9850 - chr2R_6_23760001 chr2R_23760001 CanS-JC 985 chr2R 23771251 23771304 chr2R 23771357 23771408 11 104 1.5 0.0 0.8 6.1 157 chr2R 23771251 intron CG9850 - chr2R 23771330 intron CG9850 - chr2R 23771408 intron CG9850 - chr2R_11_23770001 chr2R_23770001 CanS-JC 986 chr2R 23784451 23784507 chr2R 23784555 23784609 13 104 6.0 3.0 4.5 2.4 158 chr2R 23784451 intron CG9850 - chr2R 23784530 intron CG9850 - chr2R 23784609 intron CG9850 - chr2R_13_23780001 chr2R_23780001 CanS-JC 987 chr2R 23802261 23802312 chr2R 23802390 23802441 15 128 3.0 5.0 4.0 3.0 180 chr2R 23802261 exon CG30177 + chr2R 23802351 3` UTR CG30177 + chr2R 23802441 3` UTR CG30177 + chr2R_15_23800001 chr2R_23800001 CanS-JC 988 chr2R 23914272 23914328 chr2R 23921922 23921978 412 20 7649 7.0 9.5 8.2 2.2 7706 chr2R 23914272 exon kcc + chr2R 23918125 intron kcc + chr2R 23921978 exon kcc + chr2R_20_23915001 chr2R_23915001 CanS-JC 989 chr2R 24031356 24031410 chr2R 24031466 24031520 14 110 5.0 5.5 5.2 2.3 164 chr2R 24031356 5` UTR CG30172 - chr2R 24031438 intergenic CG30172 -,Chi - chr2R 24031520 intergenic Chi -,CG30172 - chr2R_14_24030001 chr2R_24030001 CanS-JC 990 chr2R 24147044 24147094 chr2R 24154648 24154698 412 11 7604 5.0 5.0 5.0 1.8 7654 chr2R 24147044 intron Dat + chr2R 24150871 intron Dat + chr2R 24154698 intron Dat + chr2R_11_24150001 chr2R_24150001 CanS-JC 991 chr2R 24177210 24177264 chr2R 24184721 24184775 412 12 7511 5.5 5.0 5.2 1.9 7565 chr2R 24177210 3` UTR Nop60B + chr2R 24180992 intron Nop60B + chr2R 24184775 3` UTR Nop60B + chr2R_12_24180001 chr2R_24180001 CanS-JC 992 chr2R 24228366 24228423 chr2R 24228474 24228519 14 102 5.0 7.5 6.2 1.9 153 chr2R 24228366 intron CG30419 - chr2R 24228442 intron CG30419 - chr2R 24228519 intron CG30419 - chr2R_14_24225001 chr2R_24225001 CanS-JC 993 chr2R 24283618 24283668 chr2R 24283785 24283829 13 167 5.5 3.5 4.5 2.4 211 chr2R 24283618 intron nvy + chr2R 24283724 intron nvy + chr2R 24283829 intron nvy + chr2R_13_24280001 chr2R_24280001 CanS-JC 994 chr2R 24303505 24303532 chr2R 24303610 24303637 8 105 12.0 6.5 9.2 0.8 132 chr2R 24303505 intergenic not near genes chr2R 24303571 intergenic not near genes chr2R 24303637 intergenic not near genes chr2R_8_24300001 chr2R_24300001 CanS-JC 995 chr2R 24353432 24353440 chr2R 24361820 24361828 roo 5 8388 5.0 7.0 6.0 0.7 8396 chr2R 24353432 intron,intron bs +,CR44811 - chr2R 24357630 intron,intron bs +,CR44811 - chr2R 24361828 intron,intron bs +,CR44811 - chr2R_5_24355001 chr2R_24355001 CanS-JC 996 chr2R 24430922 24430945 chr2R 24431036 24431059 7 114 0.0 4.0 2.0 2.3 137 chr2R 24430922 intergenic CG15873 -,Pgam5-2 - chr2R 24430990 intergenic CG15873 -,Pgam5-2 - chr2R 24431059 intergenic Pgam5-2 -,CG15873 - chr2R_7_24430001 chr2R_24430001 CanS-JC 997 chr2R 24448361 24448416 chr2R 24448629 24448684 10 264 2.5 4.0 3.2 2.4 323 chr2R 24448361 intergenic not near genes chr2R 24448522 intergenic not near genes chr2R 24448684 intergenic not near genes chr2R_10_24445001 chr2R_24445001 CanS-JC 998 chr2R 24493061 24493088 chr2R 24493176 24493203 9 115 4.0 4.5 4.2 1.7 142 chr2R 24493061 intergenic CG13590 -,CG13589 - chr2R 24493132 intergenic CG13590 -,CG13589 - chr2R 24493203 intergenic CG13590 -,CG13589 - chr2R_9_24490001 chr2R_24490001 CanS-JC 999 chr2R 24590091 24590144 chr2R 24590209 24590262 16 116 4.0 5.5 4.8 2.8 171 chr2R 24590091 intron pio + chr2R 24590176 intron pio + chr2R 24590262 intron pio + chr2R_16_24590001 chr2R_24590001 CanS-JC 1000 chr2R 24636877 24636907 chr2R 24636989 24637019 9 112 9.0 0.0 4.5 1.6 142 chr2R 24636877 intron CG13594 - chr2R 24636948 intron CG13594 - chr2R 24637019 intron CG13594 - chr2R_9_24635001 chr2R_24635001 CanS-JC 1001 chr2R 24642350 24642407 chr2R 24642458 24642515 25 107 1.5 8.5 5.0 4.2 165 chr2R 24642350 intergenic CG4781 - chr2R 24642432 intergenic CG4781 - chr2R 24642515 intergenic CG4781 - chr2R_25_24640001 chr2R_24640001 CanS-JC 1002 chr2R 24647556 24647615 chr2R 24655153 24655198 412 10 7586 0.0 4.0 2.0 3.3 7642 chr2R 24647556 intergenic not near genes chr2R 24651377 intergenic not near genes chr2R 24655198 intergenic not near genes chr2R_10_24650001 chr2R_24650001 CanS-JC 1003 chr2R 24656747 24656799 chr2R 24657034 24657087 15 287 3.0 4.5 3.8 3.1 340 chr2R 24656747 intergenic not near genes chr2R 24656917 intergenic not near genes chr2R 24657087 intergenic not near genes chr2R_15_24655001 chr2R_24655001 CanS-JC 1004 chr2R 24719796 24719825 chr2R 24719934 24719963 5 137 3.5 8.0 5.8 0.7 167 chr2R 24719796 intron Mid1 - chr2R 24719880 intron Mid1 - chr2R 24719963 intron Mid1 - chr2R_5_24715001 chr2R_24715001 CanS-JC 1005 chr2R 24727858 24727908 chr2R 24735392 24735427 mdg1 23 7533 6.5 4.5 5.5 3.5 7569 chr2R 24727858 intron Mid1 - chr2R 24731642 intron Mid1 - chr2R 24735427 intron Mid1 - chr2R_23_24730001 chr2R_24730001 CanS-JC 1006 chr2R 24763585 24763643 chr2R 24765587 24765645 G2 20 2002 7.5 4.5 6.0 2.9 2060 chr2R 24763585 exon CG3894 + chr2R 24764615 intron CG3894 + chr2R 24765645 exon CG3894 + chr2R_20_24760001 chr2R_24760001 CanS-JC 1007 chr2R 24859814 24859870 chr2R 24859926 24859982 26 112 2.0 3.5 2.8 6.8 168 chr2R 24859814 5` UTR CR44829 + chr2R 24859898 5` UTR CR44829 + chr2R 24859982 5` UTR CR44829 + chr2R_26_24855001 chr2R_24855001 CanS-JC 1008 chr2R 24884027 24884079 chr2R 24884135 24884187 15 108 2.0 2.5 2.2 4.7 160 chr2R 24884027 intron NKAIN + chr2R 24884107 intron NKAIN + chr2R 24884187 intron NKAIN + chr2R_15_24880001 chr2R_24880001 CanS-JC 1009 chr2R 24956239 24956293 chr2R 24956341 24956387 20 101 6.5 5.0 5.8 2.9 148 chr2R 24956239 3` UTR CR44830 - chr2R 24956313 3` UTR CR44830 - chr2R 24956387 3` UTR CR44830 - chr2R_20_24955001 chr2R_24955001 CanS-JC 1010 chr2R 25004868 25004917 chr2R 25004972 25005021 15 104 6.5 5.0 5.8 2.2 153 chr2R 25004868 intron zip - chr2R 25004944 intron zip - chr2R 25005021 intron zip - chr2R_15_25000001 chr2R_25000001 CanS-JC 1011 chr2R 25014519 25014560 chr2R 25014621 25014662 9 102 5.5 4.5 5.0 1.5 143 chr2R 25014519 intron uzip + chr2R 25014590 intron uzip + chr2R 25014662 intron uzip + chr2R_9_25010001 chr2R_25010001 CanS-JC 1012 chr2R 25104779 25104810 chr2R 25104900 25104931 8 121 5.0 4.5 4.8 1.4 152 chr2R 25104779 intron lov - chr2R 25104855 intron lov - chr2R 25104931 intron lov - chr2R_8_25100001 chr2R_25100001 CanS-JC 1013 chr2R 25116335 25116357 chr2R 25116460 25116465 6 122 6.0 0.0 3.0 1.5 130 chr2R 25116335 intron lov - chr2R 25116400 intron lov - chr2R 25116465 intron lov - chr2R_6_25115001 chr2R_25115001 CanS-JC 1014 chr2R 25124434 25124477 chr2R 25124551 25124594 16 117 3.5 0.0 1.8 5.7 160 chr2R 25124434 intron lov - chr2R 25124514 intron lov - chr2R 25124594 intron lov - chr2R_16_25120001 chr2R_25120001 CanS-JC 1015 chr2R 25141631 25141672 chr2R 25159347 25159388 roo 12 17716 2.0 6.5 4.2 2.3 17757 chr2R 25141631 intergenic not near genes chr2R 25150510 intergenic not near genes chr2R 25159388 intergenic not near genes chr2R_12_25150001 chr2R_25150001 CanS-JC 1016 chr2R 25193315 25193363 chr2R 25193483 25193533 7 169 6.0 2.0 4.0 1.4 218 chr2R 25193315 intron CG9380 - chr2R 25193424 intron CG9380 - chr2R 25193533 intron CG9380 - chr2R_7_25190001 chr2R_25190001 CanS-JC 1017 chr2R 25202225 25202273 chr2R 25202358 25202406 14 133 4.5 3.0 3.8 2.9 181 chr2R 25202225 intron CG9380 - chr2R 25202316 intron CG9380 - chr2R 25202406 intron CG9380 - chr2R_14_25200001 chr2R_25200001 CanS-JC 1018 chr2R 25253423 25253476 chr2R 25253525 25253579 13 102 4.5 2.0 3.2 3.1 156 chr2R 25253423 intron,intron CG9380 -,CG30428 + chr2R 25253501 intron,intron CG9380 -,CG30428 + chr2R 25253579 intron,intron CG9380 -,CG30428 + chr2R_13_25250001 chr2R_25250001 CanS-JC 1019 chr3L 68975 69015 chr3L 69088 69128 12 113 2.0 8.5 5.2 1.9 153 chr3L 68975 3` UTR Lsp1gamma + chr3L 69052 intergenic Lsp1gamma +,CR44510 + chr3L 69128 intergenic CR44510 +,Lsp1gamma + chr3L_12_65001 chr3L_65001 CanS-JC 1020 chr3L 88731 88774 chr3L 90677 90720 13 1944 2.5 4.0 3.2 3.1 1989 chr3L 88731 intergenic not near genes chr3L 89726 intergenic not near genes chr3L 90720 intergenic not near genes chr3L_13_85001 chr3L_85001 CanS-JC 1021 chr3L 110190 110239 chr3L 119383 119432 roo 21 9193 3.0 3.5 3.2 5.0 9242 chr3L 110190 intergenic not near genes chr3L 114811 intergenic not near genes chr3L 119432 intergenic not near genes chr3L_21_110001 chr3L_110001 CanS-JC 1022 chr3L 296042 296077 chr3L 296387 296422 13 345 3.0 7.5 5.2 2.1 380 chr3L 296042 intron RhoGEF3 + chr3L 296232 intron RhoGEF3 + chr3L 296422 intron RhoGEF3 + chr3L_13_295001 chr3L_295001 CanS-JC 1023 chr3L 383859 383895 chr3L 383964 384000 20 105 7.5 4.5 6.0 2.9 141 chr3L 383859 intron trh - chr3L 383930 intron trh - chr3L 384000 intron trh - chr3L_20_380001 chr3L_380001 CanS-JC 1024 chr3L 402666 402712 chr3L 409745 409791 297 8 7078 5.5 1.5 3.5 1.8 7125 chr3L 402666 intergenic not near genes chr3L 406228 intergenic not near genes chr3L 409791 intergenic not near genes chr3L_8_405001 chr3L_405001 CanS-JC 1025 chr3L 445523 445576 chr3L 445625 445681 9 102 3.0 1.5 2.2 2.8 158 chr3L 445523 exon klar - chr3L 445602 intron klar - chr3L 445681 intron klar - chr3L_9_445001 chr3L_445001 CanS-JC 1026 chr3L 481091 481138 chr3L 481193 481240 13 102 9.5 7.5 8.5 1.4 149 chr3L 481091 intron klar - chr3L 481166 intron klar - chr3L 481240 intron klar - chr3L_13_480001 chr3L_480001 CanS-JC 1027 chr3L 514258 514306 chr3L 514360 514409 13 103 5.5 4.5 5.0 2.2 151 chr3L 514258 intron klar - chr3L 514334 intron klar - chr3L 514409 intron klar - chr3L_13_510001 chr3L_510001 CanS-JC 1028 chr3L 567086 567125 chr3L 567283 567323 8 197 3.5 4.0 3.8 1.7 237 chr3L 567086 intron hipk + chr3L 567204 intron hipk + chr3L 567323 intron hipk + chr3L_8_565001 chr3L_565001 CanS-JC 1029 chr3L 592944 592969 chr3L 593046 593071 7 102 0.5 5.0 2.8 1.8 127 chr3L 592944 intergenic MED14 + chr3L 593008 intergenic MED14 + chr3L 593071 intergenic MED14 + chr3L_7_590001 chr3L_590001 CanS-JC 1030 chr3L 606902 606922 chr3L 607007 607027 5 105 8.0 0.0 4.0 1.0 125 chr3L 606902 intergenic Reg-2 - chr3L 606964 intergenic Reg-2 - chr3L 607027 intergenic Reg-2 - chr3L_5_605001 chr3L_605001 CanS-JC 1031 chr3L 642449 642494 chr3L 642566 642611 11 117 4.0 2.0 3.0 2.8 162 chr3L 642449 5` UTR CR43334 + chr3L 642530 5` UTR CR43334 + chr3L 642611 5` UTR CR43334 + chr3L_11_640001 chr3L_640001 CanS-JC 1032 chr3L 651363 651419 chr3L 651477 651533 17 114 3.5 4.0 3.8 3.5 170 chr3L 651363 intergenic Gale +,CG3402 - chr3L 651448 intergenic CG3402 -,Gale + chr3L 651533 intergenic CG3402 -,Gale + chr3L_17_650001 chr3L_650001 CanS-JC 1033 chr3L 670030 670054 chr3L 670134 670159 12 104 3.0 4.0 3.5 2.7 129 chr3L 670030 intergenic not near genes chr3L 670094 intergenic not near genes chr3L 670159 intergenic not near genes chr3L_12_670001 chr3L_670001 CanS-JC 1034 chr3L 738279 738311 chr3L 738383 738415 11 104 5.0 4.0 4.5 2.0 136 chr3L 738279 exon hng3 - chr3L 738347 exon hng3 - chr3L 738415 exon hng3 - chr3L_11_735001 chr3L_735001 CanS-JC 1035 chr3L 746471 746517 chr3L 746582 746628 5 111 7.0 6.5 6.8 0.6 157 chr3L 746471 intron hng3 - chr3L 746550 intron hng3 - chr3L 746628 intron hng3 - chr3L_5_745001 chr3L_745001 CanS-JC 1036 chr3L 789894 789943 chr3L 790399 790454 roo 16 510 4.0 5.5 4.8 2.8 560 chr3L 789894 intergenic not near genes chr3L 790174 intergenic not near genes chr3L 790454 intergenic not near genes chr3L_16_790001 chr3L_790001 CanS-JC 1037 chr3L 843699 843739 chr3L 843806 843847 9 107 6.5 0.0 3.2 2.1 148 chr3L 843699 3` UTR Gr61a + chr3L 843773 intergenic Gr61a +,CG13889 + chr3L 843847 intergenic CG13889 +,Gr61a + chr3L_9_840001 chr3L_840001 CanS-JC 1038 chr3L 857977 858005 chr3L 866484 866512 Tirant 16 8506 10.0 3.5 6.8 2.1 8535 chr3L 857977 intergenic not near genes chr3L 862244 intergenic not near genes chr3L 866512 5` UTR CG12502 + chr3L_16_860001 chr3L_860001 CanS-JC 1039 chr3L 875636 875682 chr3L 875749 875795 13 113 6.5 8.0 7.2 1.6 159 chr3L 875636 intron CG32479 + chr3L 875716 intron CG32479 + chr3L 875795 intron CG32479 + chr3L_13_875001 chr3L_875001 CanS-JC 1040 chr3L 905074 905094 chr3L 905184 905204 5 110 0.0 5.5 2.8 1.3 130 chr3L 905074 intergenic not near genes chr3L 905139 intergenic not near genes chr3L 905204 intergenic not near genes chr3L_5_905001 chr3L_905001 CanS-JC 1041 chr3L 925155 925201 chr3L 932607 932653 mdg1 10 7452 3.5 2.5 3.0 2.5 7498 chr3L 925155 intron Glut1 + chr3L 928904 intron Glut1 + chr3L 932653 intron Glut1 + chr3L_10_925001 chr3L_925001 CanS-JC 1042 chr3L 933882 933940 chr3L 934012 934069 13 129 6.0 8.0 7.0 1.6 187 chr3L 933882 intron Glut1 + chr3L 933976 intron Glut1 + chr3L 934069 intron Glut1 + chr3L_13_930001 chr3L_930001 CanS-JC 1043 chr3L 939755 939787 chr3L 940902 940934 jockey 17 1147 8.0 5.0 6.5 2.3 1179 chr3L 939755 intron Glut1 + chr3L 940344 intron Glut1 + chr3L 940934 intron Glut1 + chr3L_17_940001 chr3L_940001 CanS-JC 1044 chr3L 960992 961044 chr3L 961111 961163 10 119 3.0 4.0 3.5 2.2 171 chr3L 960992 intron Glut1 + chr3L 961078 intron Glut1 + chr3L 961163 intron Glut1 + chr3L_10_960001 chr3L_960001 CanS-JC 1045 chr3L 1015108 1015159 chr3L 1015224 1015259 16 112 0.0 1.5 0.8 8.9 151 chr3L 1015108 intron trio - chr3L 1015184 intron trio - chr3L 1015259 intron trio - chr3L_16_1015001 chr3L_1015001 CanS-JC 1046 chr3L 1031554 1031606 chr3L 1031656 1031708 15 101 6.0 4.5 5.2 2.4 154 chr3L 1031554 intron trio - chr3L 1031631 intron trio - chr3L 1031708 intron trio - chr3L_15_1030001 chr3L_1030001 CanS-JC 1047 chr3L 1040528 1040581 chr3L 1040638 1040691 15 110 5.0 6.0 5.5 2.3 163 chr3L 1040528 intron bab1 - chr3L 1040610 intron bab1 - chr3L 1040691 intron bab1 - chr3L_15_1040001 chr3L_1040001 CanS-JC 1048 chr3L 1042940 1042993 chr3L 1043044 1043091 13 104 2.0 3.0 2.5 3.7 151 chr3L 1042940 intron bab1 - chr3L 1043016 intron bab1 - chr3L 1043091 intron bab1 - chr3L_13_1040001 chr3L_1040001 CanS-JC 1049 chr3L 1047328 1047384 chr3L 1055165 1055200 412 16 7834 2.5 2.5 2.5 4.6 7872 chr3L 1047328 intron bab1 - chr3L 1051264 intron bab1 - chr3L 1055200 intron bab1 - chr3L_16_1050001 chr3L_1050001 CanS-JC 1050 chr3L 1077734 1077787 chr3L 1078036 1078089 16 302 5.5 3.5 4.5 2.9 355 chr3L 1077734 intron bab1 - chr3L 1077912 intron bab1 - chr3L 1078089 intron bab1 - chr3L_16_1075001 chr3L_1075001 CanS-JC 1051 chr3L 1090980 1091000 chr3L 1091093 1091113 8 113 9.0 3.5 6.2 1.1 133 chr3L 1090980 intron bab1 - chr3L 1091046 intron bab1 - chr3L 1091113 intron bab1 - chr3L_8_1090001 chr3L_1090001 CanS-JC 1052 chr3L 1109631 1109667 chr3L 1109723 1109781 21 112 1.5 5.0 3.2 5.0 150 chr3L 1109631 intergenic not near genes chr3L 1109706 intergenic not near genes chr3L 1109781 intergenic not near genes chr3L_21_1105001 chr3L_1105001 CanS-JC 1053 chr3L 1154123 1154160 chr3L 1163299 1163336 roo 10 9176 5.5 11.0 8.2 1.1 9213 chr3L 1154123 intron bab2 - chr3L 1158730 intron bab2 - chr3L 1163336 intron bab2 - chr3L_10_1155001 chr3L_1155001 CanS-JC 1054 chr3L 1219574 1219604 chr3L 1227333 1227363 412 10 7759 5.0 5.5 5.2 1.6 7789 chr3L 1219574 intron mwh + chr3L 1223468 intron mwh + chr3L 1227363 intron mwh + chr3L_10_1220001 chr3L_1220001 CanS-JC 1055 chr3L 1257620 1257651 chr3L 1257726 1257757 5 106 0.0 8.0 4.0 1.0 137 chr3L 1257620 intron CG9134 + chr3L 1257688 intron CG9134 + chr3L 1257757 intron CG9134 + chr3L_5_1255001 chr3L_1255001 CanS-JC 1056 chr3L 1310982 1311040 chr3L 1315816 1315874 17 4839 37.5 32.5 35.0 0.5 4892 chr3L 1310982 exon CG2469 + chr3L 1313428 intergenic CG9186 -,CG9153 + chr3L 1315874 exon CG9153 + chr3L_17_1310001 chr3L_1310001 CanS-JC 1057 chr3L 1321534 1321579 chr3L 1321760 1321805 14 226 5.5 5.5 5.5 2.2 271 chr3L 1321534 intron Myo61F + chr3L 1321670 intron Myo61F + chr3L 1321805 intron,3` UTR Myo61F +,CG9184 - chr3L_14_1320001 chr3L_1320001 CanS-JC 1058 chr3L 1356997 1357003 chr3L 1357100 1357106 4 103 15.5 12.5 14.0 0.3 109 chr3L 1356997 intron Ptp61F - chr3L 1357052 intron Ptp61F - chr3L 1357106 intron Ptp61F - chr3L_4_1355001 chr3L_1355001 CanS-JC 1059 chr3L 1396712 1396749 chr3L 1396822 1396855 4 107 5.5 5.0 5.2 0.6 143 chr3L 1396712 intron Ptp61F - chr3L 1396784 intron Ptp61F - chr3L 1396855 intron Ptp61F - chr3L_4_1395001 chr3L_1395001 CanS-JC 1060 chr3L 1424753 1424773 chr3L 1430021 1430039 Rt1a 6 5268 1.0 5.5 3.2 1.4 5286 chr3L 1424753 intron Ptp61F - chr3L 1427396 intron Ptp61F - chr3L 1430039 intron Ptp61F - chr3L_6_1425001 chr3L_1425001 CanS-JC 1061 chr3L 1477363 1477378 chr3L 1477479 1477494 6 116 6.0 0.0 3.0 1.5 131 chr3L 1477363 intron stet - chr3L 1477428 intron stet - chr3L 1477494 intron stet - chr3L_6_1475001 chr3L_1475001 CanS-JC 1062 chr3L 1485712 1485739 chr3L 1486909 1486936 1360 5 1197 3.0 13.0 8.0 0.6 1224 chr3L 1485712 intron stet - chr3L 1486324 intron stet - chr3L 1486936 intron stet - chr3L_5_1485001 chr3L_1485001 CanS-JC 1063 chr3L 1501973 1502020 chr3L 1502080 1502127 25 107 0.0 3.5 1.8 8.9 154 chr3L 1501973 intron pUf68 - chr3L 1502050 intron pUf68 - chr3L 1502127 intron pUf68 - chr3L_25_1500001 chr3L_1500001 CanS-JC 1064 chr3L 1505981 1506018 chr3L 1513604 1513641 17.6 5 7623 8.5 9.0 8.8 0.5 7660 chr3L 1505981 intron,intron Psa +,cue - chr3L 1509811 intron,intron Psa +,cue - chr3L 1513641 intron,intron Psa +,cue - chr3L_5_1505001 chr3L_1505001 CanS-JC 1065 chr3L 1536833 1536884 chr3L 1536943 1536994 6 110 4.0 4.5 4.2 1.2 161 chr3L 1536833 5` UTR CG12091 - chr3L 1536914 intergenic CG12091 -,CG7852 + chr3L 1536994 intergenic CG7852 +,CG12091 - chr3L_6_1535001 chr3L_1535001 CanS-JC 1066 chr3L 1585914 1585936 chr3L 1586021 1586043 5 107 6.5 6.5 6.5 0.7 129 chr3L 1585914 intron CG13917 + chr3L 1585978 intron CG13917 + chr3L 1586043 intron CG13917 + chr3L_5_1585001 chr3L_1585001 CanS-JC 1067 chr3L 1639208 1639242 chr3L 1639415 1639449 16 207 2.0 3.0 2.5 4.6 241 chr3L 1639208 5` UTR metl - chr3L 1639328 intergenic metl -,Bgb + chr3L 1639449 intergenic metl -,Bgb + chr3L_16_1635001 chr3L_1635001 CanS-JC 1068 chr3L 1684004 1684032 chr3L 1684103 1684136 9 102 4.5 2.5 3.5 2.0 132 chr3L 1684004 intron CG7991 + chr3L 1684070 intron CG7991 + chr3L 1684136 intron CG7991 + chr3L_9_1680001 chr3L_1680001 CanS-JC 1069 chr3L 1746569 1746618 chr3L 1746693 1746744 19 122 0.5 2.5 1.5 7.6 175 chr3L 1746569 intergenic CG13921 + chr3L 1746656 intergenic CG13921 + chr3L 1746744 intergenic CG13921 + chr3L_19_1745001 chr3L_1745001 CanS-JC 1070 chr3L 1805675 1805712 chr3L 1805875 1805912 7 200 0.5 2.0 1.2 3.2 237 chr3L 1805675 exon CG42676 + chr3L 1805794 intron CG42676 + chr3L 1805912 intron CG42676 + chr3L_7_1805001 chr3L_1805001 CanS-JC 1071 chr3L 1848619 1848670 chr3L 1848723 1848774 16 104 1.0 3.5 2.2 5.0 155 chr3L 1848619 intergenic not near genes chr3L 1848696 intergenic not near genes chr3L 1848774 intergenic not near genes chr3L_16_1845001 chr3L_1845001 CanS-JC 1072 chr3L 1882339 1882376 chr3L 1882461 1882493 8 120 6.5 2.0 4.2 1.5 154 chr3L 1882339 intron CG13937 - chr3L 1882416 intron CG13937 - chr3L 1882493 intron CG13937 - chr3L_8_1880001 chr3L_1880001 CanS-JC 1073 chr3L 1922420 1922441 chr3L 1922526 1922547 6 106 4.5 6.0 5.2 1.0 127 chr3L 1922420 intron Dbx + chr3L 1922484 intron Dbx + chr3L 1922547 intron Dbx + chr3L_6_1920001 chr3L_1920001 CanS-JC 1074 chr3L 1978704 1978745 chr3L 1978900 1978941 7 196 28.5 26.5 27.5 0.2 237 chr3L 1978704 intergenic not near genes chr3L 1978822 intergenic not near genes chr3L 1978941 intergenic not near genes chr3L_7_1975001 chr3L_1975001 CanS-JC 1075 chr3L 2006442 2006499 chr3L 2006548 2006605 10 106 5.0 5.0 5.0 1.7 163 chr3L 2006442 intergenic not near genes chr3L 2006524 intergenic not near genes chr3L 2006605 intergenic not near genes chr3L_10_2005001 chr3L_2005001 CanS-JC 1076 chr3L 2108226 2108278 chr3L 2113456 2113508 copia 12 5230 1.5 2.5 2.0 4.0 5282 chr3L 2108226 intron sls - chr3L 2110867 intron sls - chr3L 2113508 intron sls - chr3L_12_2110001 chr3L_2110001 CanS-JC 1077 chr3L 2139181 2139226 chr3L 2139288 2139333 8 107 6.5 4.5 5.5 1.2 152 chr3L 2139181 intron zormin - chr3L 2139257 intron zormin - chr3L 2139333 intron zormin - chr3L_8_2135001 chr3L_2135001 CanS-JC 1078 chr3L 2168752 2168800 chr3L 2168869 2168917 11 117 3.5 3.0 3.2 2.6 165 chr3L 2168752 exon CG15879 - chr3L 2168834 intron CG15879 - chr3L 2168917 intron CG15879 - chr3L_11_2165001 chr3L_2165001 CanS-JC 1079 chr3L 2181153 2181201 chr3L 2181258 2181306 13 105 4.0 4.0 4.0 2.6 153 chr3L 2181153 intergenic not near genes chr3L 2181230 intergenic not near genes chr3L 2181306 intergenic not near genes chr3L_13_2180001 chr3L_2180001 CanS-JC 1080 chr3L 2199787 2199818 chr3L 2199889 2199920 10 101 0.0 6.5 3.2 2.4 133 chr3L 2199787 intergenic not near genes chr3L 2199854 intergenic not near genes chr3L 2199920 intergenic not near genes chr3L_10_2195001 chr3L_2195001 CanS-JC 1081 chr3L 2277952 2278009 chr3L 2278174 2278231 20 222 3.0 5.5 4.2 3.8 279 chr3L 2277952 3` UTR yellow-g2 + chr3L 2278092 intergenic yellow-g2 + chr3L 2278231 intergenic yellow-g2 + chr3L_20_2275001 chr3L_2275001 CanS-JC 1082 chr3L 2307976 2308031 chr3L 2308108 2308163 13 132 7.5 5.0 6.2 1.8 187 chr3L 2307976 intergenic not near genes chr3L 2308070 intergenic not near genes chr3L 2308163 intergenic not near genes chr3L_13_2305001 chr3L_2305001 CanS-JC 1083 chr3L 2310125 2310176 chr3L 2310894 2310945 29 769 2.0 5.0 3.5 6.4 820 chr3L 2310125 intergenic not near genes chr3L 2310535 intergenic not near genes chr3L 2310945 intergenic not near genes chr3L_29_2310001 chr3L_2310001 CanS-JC 1084 chr3L 2316665 2316702 chr3L 2316776 2316812 6 110 7.5 4.5 6.0 0.9 147 chr3L 2316665 intergenic CR45427 - chr3L 2316738 intergenic CR45427 - chr3L 2316812 intergenic CR45427 - chr3L_6_2315001 chr3L_2315001 CanS-JC 1085 chr3L 2331559 2331614 chr3L 2331662 2331717 8 103 4.5 5.0 4.8 1.4 158 chr3L 2331559 intron MsR1 + chr3L 2331638 intron MsR1 + chr3L 2331717 intron MsR1 + chr3L_8_2330001 chr3L_2330001 CanS-JC 1086 chr3L 2355421 2355463 chr3L 2355635 2355677 7 214 3.0 0.0 1.5 2.8 256 chr3L 2355421 intergenic not near genes chr3L 2355549 intergenic not near genes chr3L 2355677 intergenic not near genes chr3L_7_2355001 chr3L_2355001 CanS-JC 1087 chr3L 2356044 2356094 chr3L 2356158 2356208 21 114 1.5 2.0 1.8 7.5 164 chr3L 2356044 intergenic not near genes chr3L 2356126 intergenic not near genes chr3L 2356208 intergenic not near genes chr3L_21_2355001 chr3L_2355001 CanS-JC 1088 chr3L 2411312 2411343 chr3L 2411418 2411449 14 106 1.5 7.0 4.2 2.7 137 chr3L 2411312 intron CG45186 + chr3L 2411380 intron CG45186 + chr3L 2411449 intron CG45186 + chr3L_14_2410001 chr3L_2410001 CanS-JC 1089 chr3L 2429037 2429077 chr3L 2429156 2429196 15 118 6.0 5.5 5.8 2.2 159 chr3L 2429037 intron CG45186 + chr3L 2429116 intron CG45186 + chr3L 2429196 intron CG45186 + chr3L_15_2425001 chr3L_2425001 CanS-JC 1090 chr3L 2433470 2433512 chr3L 2433579 2433621 9 109 4.0 6.0 5.0 1.5 151 chr3L 2433470 intron CG45186 + chr3L 2433546 intron CG45186 + chr3L 2433621 intron CG45186 + chr3L_9_2430001 chr3L_2430001 CanS-JC 1091 chr3L 2447483 2447532 chr3L 2456665 2456714 roo 14 9182 8.5 4.5 6.5 1.9 9231 chr3L 2447483 intron CG45186 + chr3L 2452098 intron CG45186 + chr3L 2456714 intron CG45186 + chr3L_14_2450001 chr3L_2450001 CanS-JC 1092 chr3L 2467429 2467482 chr3L 2467552 2467605 6 123 2.5 2.0 2.2 1.9 176 chr3L 2467429 intron CG45186 + chr3L 2467517 intron CG45186 + chr3L 2467605 intron CG45186 + chr3L_6_2465001 chr3L_2465001 CanS-JC 1093 chr3L 2515417 2515430 chr3L 2515525 2515538 6 108 1.0 9.0 5.0 1.0 121 chr3L 2515417 intron Spn - chr3L 2515478 intron Spn - chr3L 2515538 intron Spn - chr3L_6_2515001 chr3L_2515001 CanS-JC 1094 chr3L 2520634 2520675 chr3L 2520756 2520797 15 122 1.5 8.0 4.8 2.6 163 chr3L 2520634 intron Spn - chr3L 2520716 intron Spn - chr3L 2520797 intron Spn - chr3L_15_2520001 chr3L_2520001 CanS-JC 1095 chr3L 2533633 2533648 chr3L 2533741 2533756 4 108 12.0 6.0 9.0 0.4 123 chr3L 2533633 intron Spn - chr3L 2533694 intron Spn - chr3L 2533756 intron Spn - chr3L_4_2530001 chr3L_2530001 CanS-JC 1096 chr3L 2533649 2533679 chr3L 2533733 2533742 9 98 5.5 4.5 5.0 1.5 93 chr3L 2533649 intron Spn - chr3L 2533696 intron Spn - chr3L 2533742 intron Spn - chr3L_9_2530001 chr3L_2530001 CanS-JC 1097 chr3L 2548231 2548285 chr3L 2548346 2548400 21 115 5.0 2.0 3.5 4.7 169 chr3L 2548231 intron Spn - chr3L 2548316 intron Spn - chr3L 2548400 intron Spn - chr3L_21_2545001 chr3L_2545001 CanS-JC 1098 chr3L 2551745 2551787 chr3L 2553568 2553610 6 1823 24.0 28.0 26.0 0.2 1865 chr3L 2551745 intron Spn - chr3L 2552678 intron Spn - chr3L 2553610 intron Spn - chr3L_6_2550001 chr3L_2550001 CanS-JC 1099 chr3L 2561501 2561559 chr3L 2561604 2561661 16 102 7.0 7.0 7.0 2.0 160 chr3L 2561501 intron msn - chr3L 2561581 intron msn - chr3L 2561661 intron msn - chr3L_16_2560001 chr3L_2560001 CanS-JC 1100 chr3L 2626072 2626082 chr3L 2626199 2626209 4 127 8.0 8.0 8.0 0.4 137 chr3L 2626072 intron Pxn - chr3L 2626140 intron Pxn - chr3L 2626209 intron Pxn - chr3L_4_2625001 chr3L_2625001 CanS-JC 1101 chr3L 2927814 2927867 chr3L 2936117 2936170 Tirant 8 8303 3.5 2.5 3.0 2.0 8356 chr3L 2927814 intron Shab + chr3L 2931992 intron Shab + chr3L 2936170 intron Shab + chr3L_8_2930001 chr3L_2930001 CanS-JC 1102 chr3L 3061267 3061316 chr3L 3069876 3069925 Tirant 13 8609 4.5 9.0 6.8 1.7 8658 chr3L 3061267 intron CG32486 - chr3L 3065596 intron CG32486 - chr3L 3069925 intron CG32486 - chr3L_13_3065001 chr3L_3065001 CanS-JC 1103 chr3L 3254065 3254108 chr3L 3254182 3254225 10 117 5.5 3.0 4.2 1.9 160 chr3L 3254065 5` UTR CR43626 + chr3L 3254145 5` UTR CR43626 + chr3L 3254225 5` UTR CR43626 + chr3L_10_3250001 chr3L_3250001 CanS-JC 1104 chr3L 3259811 3259831 chr3L 3259937 3259957 6 126 1.5 6.0 3.8 1.2 146 chr3L 3259811 intron ckd + chr3L 3259884 intron ckd + chr3L 3259957 intron ckd + chr3L_6_3255001 chr3L_3255001 CanS-JC 1105 chr3L 3281432 3281437 chr3L 3281954 3281959 Doc 4 522 13.0 10.0 11.5 0.3 527 chr3L 3281432 intron CG12017 + chr3L 3281696 intron CG12017 + chr3L 3281959 intron CG12017 + chr3L_4_3280001 chr3L_3280001 CanS-JC 1106 chr3L 3281441 3281467 chr3L 3281953 3281989 Doc 9 518 6.5 10.0 8.2 1.0 548 chr3L 3281441 intron CG12017 + chr3L 3281715 intron CG12017 + chr3L 3281989 intron CG12017 + chr3L_9_3280001 chr3L_3280001 CanS-JC 1107 chr3L 3310269 3310324 chr3L 3310374 3310429 11 105 7.0 8.5 7.8 1.2 160 chr3L 3310269 intron ZnT63C + chr3L 3310349 intron ZnT63C + chr3L 3310429 intron ZnT63C + chr3L_11_3310001 chr3L_3310001 CanS-JC 1108 chr3L 3317520 3317563 chr3L 3317625 3317668 14 105 0.5 3.0 1.8 5.0 148 chr3L 3317520 intergenic Drsl5 + chr3L 3317594 intergenic PIG-C -,Drsl5 + chr3L 3317668 intergenic PIG-C - chr3L_14_3315001 chr3L_3315001 CanS-JC 1109 chr3L 3436266 3436316 chr3L 3436371 3436421 13 105 2.0 4.0 3.0 3.2 155 chr3L 3436266 intron eIF5B - chr3L 3436344 intron eIF5B - chr3L 3436421 intron eIF5B - chr3L_13_3435001 chr3L_3435001 CanS-JC 1110 chr3L 3475047 3475094 chr3L 3475518 3475564 jockey 18 469 3.5 5.5 4.5 3.3 517 chr3L 3475047 intron CG42324 + chr3L 3475306 intron CG42324 + chr3L 3475564 intron CG42324 + chr3L_18_3475001 chr3L_3475001 CanS-JC 1111 chr3L 3494172 3494205 chr3L 3494275 3494308 6 103 0.0 4.5 2.2 1.9 136 chr3L 3494172 intron CG42324 + chr3L 3494240 intron CG42324 + chr3L 3494308 intron CG42324 + chr3L_6_3490001 chr3L_3490001 CanS-JC 1112 chr3L 3533607 3533657 chr3L 3533733 3533803 4 136 1.5 0.0 0.8 2.2 196 chr3L 3533607 intron Eip63E + chr3L 3533705 intron Eip63E + chr3L 3533803 intron Eip63E + chr3L_4_3530001 chr3L_3530001 CanS-JC 1113 chr3L 3601283 3601324 chr3L 3606620 3606661 copia 6 5337 4.0 8.0 6.0 0.9 5378 chr3L 3601283 intron Eip63E + chr3L 3603972 intron Eip63E + chr3L 3606661 intron Eip63E + chr3L_6_3600001 chr3L_3600001 CanS-JC 1114 chr3L 3620735 3620793 chr3L 3620851 3620909 18 113 4.5 1.5 3.0 4.5 174 chr3L 3620735 intron CG14974 - chr3L 3620822 intron CG14974 - chr3L 3620909 exon CG14974 - chr3L_18_3620001 chr3L_3620001 CanS-JC 1115 chr3L 3638536 3638586 chr3L 3638684 3638735 5 149 3.5 0.0 1.8 1.8 199 chr3L 3638536 intron dar1 + chr3L 3638636 intron dar1 + chr3L 3638735 intron dar1 + chr3L_5_3635001 chr3L_3635001 CanS-JC 1116 chr3L 3709438 3709448 chr3L 3709546 3709556 5 108 4.5 2.5 3.5 1.1 118 chr3L 3709438 intergenic CR45675 + chr3L 3709497 intergenic CR45675 + chr3L 3709556 intergenic not near genes chr3L_5_3705001 chr3L_3705001 CanS-JC 1117 chr3L 3766712 3766739 chr3L 3766824 3766851 11 112 3.5 0.0 1.8 3.9 139 chr3L 3766712 intron CG32264 - chr3L 3766782 intron CG32264 - chr3L 3766851 intron CG32264 - chr3L_11_3765001 chr3L_3765001 CanS-JC 1118 chr3L 3783245 3783259 chr3L 3783347 3783361 4 102 0.5 4.5 2.5 1.1 116 chr3L 3783245 intron CG32264 - chr3L 3783303 intron CG32264 - chr3L 3783361 intron CG32264 - chr3L_4_3780001 chr3L_3780001 CanS-JC 1119 chr3L 3797363 3797422 chr3L 3797528 3797587 17 165 3.5 7.0 5.2 2.7 224 chr3L 3797363 intron CG32264 - chr3L 3797475 intron CG32264 - chr3L 3797587 intron CG32264 - chr3L_17_3795001 chr3L_3795001 CanS-JC 1120 chr3L 3798012 3798070 chr3L 3798118 3798176 17 106 4.0 2.0 3.0 4.2 164 chr3L 3798012 intron CG32264 - chr3L 3798094 intron CG32264 - chr3L 3798176 intron CG32264 - chr3L_17_3795001 chr3L_3795001 CanS-JC 1121 chr3L 3833712 3833767 chr3L 3833979 3834034 pogo 7 267 3.5 2.0 2.8 1.8 322 chr3L 3833712 intron enc + chr3L 3833873 intron enc + chr3L 3834034 intron enc + chr3L_7_3830001 chr3L_3830001 CanS-JC 1122 chr3L 4015713 4015763 chr3L 4015822 4015872 8 106 4.5 3.0 3.8 1.7 159 chr3L 4015713 intergenic not near genes chr3L 4015792 intergenic not near genes chr3L 4015872 intergenic not near genes chr3L_8_4015001 chr3L_4015001 CanS-JC 1123 chr3L 4146803 4146823 chr3L 4146911 4146931 5 108 0.0 4.5 2.2 1.6 128 chr3L 4146803 intergenic not near genes chr3L 4146867 intergenic not near genes chr3L 4146931 intergenic not near genes chr3L_5_4145001 chr3L_4145001 CanS-JC 1124 chr3L 4170133 4170159 chr3L 4170235 4170263 5 103 2.5 2.5 2.5 1.4 130 chr3L 4170133 intergenic Ero1L + chr3L 4170198 intergenic Ero1L + chr3L 4170263 intergenic Ero1L + chr3L_5_4170001 chr3L_4170001 CanS-JC 1125 chr3L 4229712 4229726 chr3L 4229832 4229847 7 119 13.0 6.0 9.5 0.7 135 chr3L 4229712 intron ImpL2 - chr3L 4229780 intron ImpL2 - chr3L 4229847 intron ImpL2 - chr3L_7_4225001 chr3L_4225001 CanS-JC 1126 chr3L 4229731 4229756 chr3L 4229824 4229877 11 118 4.5 5.0 4.8 1.9 146 chr3L 4229731 intron ImpL2 - chr3L 4229804 intron ImpL2 - chr3L 4229877 intron ImpL2 - chr3L_11_4225001 chr3L_4225001 CanS-JC 1127 chr3L 4277205 4277267 chr3L 4277325 4277355 12 120 0.0 0.0 0.0 12.0 150 chr3L 4277205 exon CG1273 + chr3L 4277280 exon CG1273 + chr3L 4277355 exon CG1273 + chr3L_12_4275001 chr3L_4275001 CanS-JC 1128 chr3L 4440752 4440767 chr3L 4440859 4440874 4 107 0.5 1.5 1.0 2.0 122 chr3L 4440752 intergenic not near genes chr3L 4440813 intergenic not near genes chr3L 4440874 intergenic not near genes chr3L_4_4440001 chr3L_4440001 CanS-JC 1129 chr3L 4536332 4536385 chr3L 4536459 4536496 15 126 4.0 2.5 3.2 3.6 164 chr3L 4536332 exon CG11353 + chr3L 4536414 intron CG11353 + chr3L 4536496 intron CG11353 + chr3L_15_4535001 chr3L_4535001 CanS-JC 1130 chr3L 4638872 4638910 chr3L 4638993 4639031 12 121 7.0 0.5 3.8 2.5 159 chr3L 4638872 intron axo - chr3L 4638952 intron axo - chr3L 4639031 intron axo - chr3L_12_4635001 chr3L_4635001 CanS-JC 1131 chr3L 4676013 4676045 chr3L 4676120 4676152 4 107 1.5 4.5 3.0 1.0 139 chr3L 4676013 intron axo - chr3L 4676082 intron axo - chr3L 4676152 intron axo - chr3L_4_4675001 chr3L_4675001 CanS-JC 1132 chr3L 4754736 4754769 chr3L 4754838 4754871 6 102 2.5 3.5 3.0 1.5 135 chr3L 4754736 intron RhoGEF64C + chr3L 4754804 intron RhoGEF64C + chr3L 4754871 intron RhoGEF64C + chr3L_6_4750001 chr3L_4750001 CanS-JC 1133 chr3L 4837864 4837901 chr3L 4837968 4838006 7 105 6.0 4.5 5.2 1.1 142 chr3L 4837864 3` UTR CG13707 - chr3L 4837935 3` UTR CG13707 - chr3L 4838006 3` UTR CG13707 - chr3L_7_4835001 chr3L_4835001 CanS-JC 1134 chr3L 4840378 4840422 chr3L 4840512 4840557 9 135 0.5 6.0 3.2 2.1 179 chr3L 4840378 intergenic CG13707 - chr3L 4840468 intergenic CG13707 - chr3L 4840557 intergenic CG13707 - chr3L_9_4840001 chr3L_4840001 CanS-JC 1135 chr3L 4858282 4858334 chr3L 4858398 4858450 16 116 3.5 4.0 3.8 3.3 168 chr3L 4858282 intergenic not near genes chr3L 4858366 intergenic not near genes chr3L 4858450 intergenic not near genes chr3L_16_4855001 chr3L_4855001 CanS-JC 1136 chr3L 4901111 4901155 chr3L 4907327 4907371 diver 9 6216 4.5 7.5 6.0 1.3 6260 chr3L 4901111 intergenic CG13704 + chr3L 4904241 intergenic not near genes chr3L 4907371 intergenic not near genes chr3L_9_4900001 chr3L_4900001 CanS-JC 1137 chr3L 4941817 4941855 chr3L 4942126 4942164 7 309 5.0 4.0 4.5 1.3 347 chr3L 4941817 intron Con - chr3L 4941990 intron Con - chr3L 4942164 intron Con - chr3L_7_4940001 chr3L_4940001 CanS-JC 1138 chr3L 4942705 4942757 chr3L 4942811 4942863 20 106 5.5 4.0 4.8 3.4 158 chr3L 4942705 intron Con - chr3L 4942784 intron Con - chr3L 4942863 intron Con - chr3L_20_4940001 chr3L_4940001 CanS-JC 1139 chr3L 5045437 5045475 chr3L 5050244 5050282 Doc 7 4804 5.0 3.0 4.0 1.4 4845 chr3L 5045437 intron Con - chr3L 5047860 intron Con - chr3L 5050282 intron Con - chr3L_7_5045001 chr3L_5045001 CanS-JC 1140 chr3L 5054920 5054973 chr3L 5055026 5055077 22 105 1.5 4.0 2.8 5.8 157 chr3L 5054920 intron Con - chr3L 5054998 intron Con - chr3L 5055077 intron Con - chr3L_22_5050001 chr3L_5050001 CanS-JC 1141 chr3L 5081831 5081877 chr3L 5081936 5081982 18 105 5.0 6.0 5.5 2.8 151 chr3L 5081831 intergenic not near genes chr3L 5081906 intergenic not near genes chr3L 5081982 intergenic not near genes chr3L_18_5080001 chr3L_5080001 CanS-JC 1142 chr3L 5104459 5104512 chr3L 5124618 5124672 24 20160 3.0 3.0 3.0 6.0 20213 chr3L 5104459 intergenic not near genes chr3L 5114566 intergenic not near genes chr3L 5124672 intergenic not near genes chr3L_24_5110001 chr3L_5110001 CanS-JC 1143 chr3L 5164610 5164670 chr3L 5164712 5164772 17 102 5.0 3.5 4.2 3.3 162 chr3L 5164610 intron shep - chr3L 5164691 intron shep - chr3L 5164772 intron shep - chr3L_17_5160001 chr3L_5160001 CanS-JC 1144 chr3L 5177637 5177672 chr3L 5177760 5177795 16 123 6.0 5.0 5.5 2.5 158 chr3L 5177637 intron shep - chr3L 5177716 intron shep - chr3L 5177795 intron shep - chr3L_16_5175001 chr3L_5175001 CanS-JC 1145 chr3L 5458086 5458091 chr3L 5466714 5466714 Max-element 4 8627 5.0 9.0 7.0 0.5 8628 chr3L 5458086 intergenic not near genes chr3L 5462400 intergenic not near genes chr3L 5466714 intergenic not near genes chr3L_4_5460001 chr3L_5460001 CanS-JC 1146 chr3L 5485236 5485271 chr3L 5485569 5485604 7 333 6.5 2.0 4.2 1.3 368 chr3L 5485236 intergenic not near genes chr3L 5485420 intergenic not near genes chr3L 5485604 intergenic not near genes chr3L_7_5485001 chr3L_5485001 CanS-JC 1147 chr3L 5498369 5498428 chr3L 5498484 5498531 9 110 0.5 5.0 2.8 2.4 162 chr3L 5498369 exon blanks - chr3L 5498450 exon blanks - chr3L 5498531 exon blanks - chr3L_9_5495001 chr3L_5495001 CanS-JC 1148 chr3L 5527605 5527647 chr3L 5527731 5527773 16 126 33.0 33.0 33.0 0.5 168 chr3L 5527605 intron Lkr - chr3L 5527689 intron Lkr - chr3L 5527773 intron Lkr - chr3L_16_5525001 chr3L_5525001 CanS-JC 1149 chr3L 5537695 5537728 chr3L 5538063 5538096 jockey 14 368 8.0 5.5 6.8 1.8 401 chr3L 5537695 intergenic not near genes chr3L 5537896 intergenic not near genes chr3L 5538096 intergenic CG10625 - chr3L_14_5535001 chr3L_5535001 CanS-JC 1150 chr3L 5581451 5581498 chr3L 5581563 5581610 19 112 2.5 3.5 3.0 4.8 159 chr3L 5581451 intergenic not near genes chr3L 5581530 intergenic not near genes chr3L 5581610 intergenic not near genes chr3L_19_5580001 chr3L_5580001 CanS-JC 1151 chr3L 5677162 5677197 chr3L 5677263 5677299 8 102 0.0 8.5 4.2 1.5 137 chr3L 5677162 intron sif + chr3L 5677230 intron sif + chr3L 5677299 intron sif + chr3L_8_5675001 chr3L_5675001 CanS-JC 1152 chr3L 5908054 5908069 chr3L 5908160 5908175 9 106 0.5 4.0 2.2 2.8 121 chr3L 5908054 intron CG13288 + chr3L 5908114 intron CG13288 + chr3L 5908175 intron CG13288 + chr3L_9_5905001 chr3L_5905001 CanS-JC 1153 chr3L 5908073 5908103 chr3L 5908157 5908208 5 101 0.5 3.0 1.8 1.8 135 chr3L 5908073 intron CG13288 + chr3L 5908140 intron CG13288 + chr3L 5908208 intron CG13288 + chr3L_5_5905001 chr3L_5905001 CanS-JC 1154 chr3L 5910005 5910051 chr3L 5910272 5910318 pogo 11 267 9.0 2.0 5.5 1.7 313 chr3L 5910005 intron CG13288 + chr3L 5910162 intron CG13288 + chr3L 5910318 intron CG13288 + chr3L_11_5910001 chr3L_5910001 CanS-JC 1155 chr3L 5926293 5926340 chr3L 5926509 5926556 BS 18 216 5.5 5.0 5.2 2.9 263 chr3L 5926293 intron Vap-33B + chr3L 5926424 intron Vap-33B + chr3L 5926556 intron Vap-33B + chr3L_18_5925001 chr3L_5925001 CanS-JC 1156 chr3L 5937201 5937245 chr3L 5937334 5937378 10 130 8.5 6.5 7.5 1.2 177 chr3L 5937201 intron CG33993 - chr3L 5937290 intron CG33993 - chr3L 5937378 intron CG33993 - chr3L_10_5935001 chr3L_5935001 CanS-JC 1157 chr3L 5983806 5983844 chr3L 5983953 5983991 4 147 7.0 0.0 3.5 0.9 185 chr3L 5983806 3` UTR CR45439 - chr3L 5983898 intergenic CR45439 -,CR45440 - chr3L 5983991 intergenic CR45439 -,CR45440 - chr3L_4_5980001 chr3L_5980001 CanS-JC 1158 chr3L 6001671 6001709 chr3L 6004397 6004435 jockey 7 2726 6.5 2.0 4.2 1.3 2764 chr3L 6001671 intron PVRAP + chr3L 6003053 intron PVRAP + chr3L 6004435 intron PVRAP + chr3L_7_6000001 chr3L_6000001 CanS-JC 1159 chr3L 6040251 6040288 chr3L 6040357 6040394 14 106 4.0 0.5 2.2 4.4 143 chr3L 6040251 intergenic Jon65Aiv + chr3L 6040322 intergenic Jon65Aiv + chr3L 6040394 intergenic Jon65Aiv + chr3L_14_6040001 chr3L_6040001 CanS-JC 1160 chr3L 6040352 6040391 chr3L 6042734 6042773 Doc 12 2382 0.5 8.0 4.2 2.3 2421 chr3L 6040352 intergenic Jon65Aiv + chr3L 6041562 intergenic not near genes chr3L 6042773 intergenic not near genes chr3L_12_6040001 chr3L_6040001 CanS-JC 1161 chr3L 6052632 6052661 chr3L 6052743 6052772 10 110 6.5 6.5 6.5 1.3 140 chr3L 6052632 exon Jon65Aii + chr3L 6052702 intron Jon65Aii + chr3L 6052772 exon Jon65Aii + chr3L_10_6050001 chr3L_6050001 CanS-JC 1162 chr3L 6064997 6065044 chr3L 6065100 6065147 8 103 2.0 3.0 2.5 2.3 150 chr3L 6064997 intergenic not near genes chr3L 6065072 intergenic not near genes chr3L 6065147 intergenic not near genes chr3L_8_6065001 chr3L_6065001 CanS-JC 1163 chr3L 6119128 6119153 chr3L 6119243 6119268 4 115 3.5 4.5 4.0 0.8 140 chr3L 6119128 exon Ets65A + chr3L 6119198 intron Ets65A + chr3L 6119268 intron Ets65A + chr3L_4_6115001 chr3L_6115001 CanS-JC 1164 chr3L 6155672 6155709 chr3L 6155784 6155821 8 112 3.0 4.5 3.8 1.7 149 chr3L 6155672 intergenic CR45421 - chr3L 6155746 intergenic not near genes chr3L 6155821 intergenic not near genes chr3L_8_6155001 chr3L_6155001 CanS-JC 1165 chr3L 6220897 6220945 chr3L 6230074 6230123 roo 10 9178 5.0 6.5 5.8 1.5 9226 chr3L 6220897 5` UTR pncr008:3L + chr3L 6225510 intergenic not near genes chr3L 6230123 intergenic not near genes chr3L_10_6225001 chr3L_6225001 CanS-JC 1166 chr3L 6334998 6335035 chr3L 6335495 6335532 297 22 494 8.5 9.0 8.8 2.2 534 chr3L 6334998 intron CG13300 - chr3L 6335265 intron CG13300 - chr3L 6335532 intron CG13300 - chr3L_22_6335001 chr3L_6335001 CanS-JC 1167 chr3L 6353356 6353407 chr3L 6353462 6353513 13 103 3.5 5.0 4.2 2.5 157 chr3L 6353356 intergenic not near genes chr3L 6353434 intergenic not near genes chr3L 6353513 intergenic not near genes chr3L_13_6350001 chr3L_6350001 CanS-JC 1168 chr3L 6405643 6405677 chr3L 6432133 6432167 roo 8 26490 4.0 6.5 5.2 1.3 26524 chr3L 6405643 intron CG42747 + chr3L 6418905 intron CG42747 + chr3L 6432167 intron CG42747 + chr3L_8_6415001 chr3L_6415001 CanS-JC 1169 chr3L 6573629 6573679 chr3L 6573758 6573808 16 127 8.0 4.5 6.2 2.2 179 chr3L 6573629 intron,intron CG18769 +,jv - chr3L 6573718 intron,intron CG18769 +,jv - chr3L 6573808 intron,intron CG18769 +,jv - chr3L_16_6570001 chr3L_6570001 CanS-JC 1170 chr3L 6604288 6604293 chr3L 6604391 6604396 4 103 0.0 7.5 3.8 0.8 108 chr3L 6604288 intron CG8368 + chr3L 6604342 intron CG8368 + chr3L 6604396 intron,3` UTR CG8368 +,zpg - chr3L_4_6600001 chr3L_6600001 CanS-JC 1171 chr3L 6668948 6668986 chr3L 6669055 6669093 12 107 5.0 0.0 2.5 3.4 145 chr3L 6668948 intergenic not near genes chr3L 6669020 intergenic not near genes chr3L 6669093 intergenic not near genes chr3L_12_6665001 chr3L_6665001 CanS-JC 1172 chr3L 6705607 6705649 chr3L 6706045 6706087 16 438 24.0 6.0 15.0 1.0 480 chr3L 6705607 intron CG8519 + chr3L 6705847 intron CG8519 + chr3L 6706087 intron CG8519 + chr3L_16_6705001 chr3L_6705001 CanS-JC 1173 chr3L 6705606 6705648 chr3L 6705953 6705995 16 347 24.0 21.0 22.5 0.7 389 chr3L 6705606 intron CG8519 + chr3L 6705800 intron CG8519 + chr3L 6705995 intron CG8519 + chr3L_16_6705001 chr3L_6705001 CanS-JC 1174 chr3L 6781098 6781153 chr3L 6783137 6783189 Doc 9 2038 2.0 0.0 1.0 4.5 2091 chr3L 6781098 intergenic not near genes chr3L 6782144 intergenic not near genes chr3L 6783189 intergenic not near genes chr3L_9_6780001 chr3L_6780001 CanS-JC 1175 chr3L 6798627 6798680 chr3L 6798927 6798980 17 300 1.5 3.5 2.5 4.9 353 chr3L 6798627 intergenic not near genes chr3L 6798804 intergenic not near genes chr3L 6798980 intergenic not near genes chr3L_17_6795001 chr3L_6795001 CanS-JC 1176 chr3L 6844342 6844382 chr3L 6844514 6844554 8 172 10.0 5.5 7.8 0.9 212 chr3L 6844342 intergenic not near genes chr3L 6844448 intergenic not near genes chr3L 6844554 intergenic not near genes chr3L_8_6840001 chr3L_6840001 CanS-JC 1177 chr3L 6855909 6855946 chr3L 6860718 6860756 Doc 16 4809 4.5 5.0 4.8 2.8 4847 chr3L 6855909 intergenic not near genes chr3L 6858332 intergenic not near genes chr3L 6860756 intergenic not near genes chr3L_16_6855001 chr3L_6855001 CanS-JC 1178 chr3L 6887508 6887541 chr3L 6895026 6895059 roo 4 7518 7.5 0.0 3.8 0.8 7551 chr3L 6887508 intergenic not near genes chr3L 6891284 intergenic not near genes chr3L 6895059 intergenic not near genes chr3L_4_6890001 chr3L_6890001 CanS-JC 1179 chr3L 6900896 6900929 chr3L 6901184 6901217 9 288 0.5 2.5 1.5 3.6 321 chr3L 6900896 intergenic not near genes chr3L 6901056 intergenic not near genes chr3L 6901217 intergenic not near genes chr3L_9_6900001 chr3L_6900001 CanS-JC 1180 chr3L 6934325 6934361 chr3L 6934462 6934498 11 136 1.5 3.0 2.2 3.4 173 chr3L 6934325 exon CG14820 + chr3L 6934412 intron CG14820 + chr3L 6934498 exon CG14820 + chr3L_11_6930001 chr3L_6930001 CanS-JC 1181 chr3L 6981922 6981938 chr3L 6982102 6982118 5 180 0.0 3.5 1.8 1.8 196 chr3L 6981922 intergenic not near genes chr3L 6982020 intergenic not near genes chr3L 6982118 intergenic not near genes chr3L_5_6980001 chr3L_6980001 CanS-JC 1182 chr3L 6994890 6994914 chr3L 6995527 6995551 BS 9 637 0.0 4.5 2.2 2.8 661 chr3L 6994890 intergenic bin + chr3L 6995220 intergenic not near genes chr3L 6995551 intergenic not near genes chr3L_9_6995001 chr3L_6995001 CanS-JC 1183 chr3L 7001969 7001975 chr3L 7002116 7002121 7 146 2.5 4.5 3.5 1.6 152 chr3L 7001969 intron Mp + chr3L 7002045 intron Mp + chr3L 7002121 intron Mp + chr3L_7_7000001 chr3L_7000001 CanS-JC 1184 chr3L 7014464 7014510 chr3L 7018918 7018964 12 4453 16.5 11.0 13.8 0.8 4500 chr3L 7014464 intron Mp + chr3L 7016714 intron Mp + chr3L 7018964 intron Mp + chr3L_12_7015001 chr3L_7015001 CanS-JC 1185 chr3L 7033155 7033205 chr3L 7033261 7033313 12 106 2.5 4.0 3.2 2.9 158 chr3L 7033155 intron Mp + chr3L 7033234 intron Mp + chr3L 7033313 intron Mp + chr3L_12_7030001 chr3L_7030001 CanS-JC 1186 chr3L 7041899 7041924 chr3L 7042003 7042028 13 104 1.5 5.0 3.2 3.1 129 chr3L 7041899 intron Mp + chr3L 7041964 intron Mp + chr3L 7042028 intron Mp + chr3L_13_7040001 chr3L_7040001 CanS-JC 1187 chr3L 7085142 7085191 chr3L 7085252 7085301 21 110 4.0 5.0 4.5 3.8 159 chr3L 7085142 intergenic not near genes chr3L 7085222 intergenic not near genes chr3L 7085301 intergenic not near genes chr3L_21_7085001 chr3L_7085001 CanS-JC 1188 chr3L 7100152 7100175 chr3L 7100254 7100277 4 102 7.5 4.5 6.0 0.6 125 chr3L 7100152 intron form3 + chr3L 7100214 intron form3 + chr3L 7100277 intron form3 + chr3L_4_7100001 chr3L_7100001 CanS-JC 1189 chr3L 7164535 7164561 chr3L 7164642 7164668 10 107 6.5 3.5 5.0 1.7 133 chr3L 7164535 intron Dscam2 - chr3L 7164602 intron Dscam2 - chr3L 7164668 intron Dscam2 - chr3L_10_7160001 chr3L_7160001 CanS-JC 1190 chr3L 7174000 7174057 chr3L 7174119 7174173 17 117 5.0 1.5 3.2 4.0 173 chr3L 7174000 intron Dscam2 - chr3L 7174086 intron Dscam2 - chr3L 7174173 intron Dscam2 - chr3L_17_7170001 chr3L_7170001 CanS-JC 1191 chr3L 7185195 7185212 chr3L 7185312 7185329 7 117 4.5 4.0 4.2 1.3 134 chr3L 7185195 intron Dscam2 - chr3L 7185262 intron Dscam2 - chr3L 7185329 intron Dscam2 - chr3L_7_7185001 chr3L_7185001 CanS-JC 1192 chr3L 7187383 7187415 chr3L 7187491 7187522 8 108 0.0 0.0 0.0 8.0 139 chr3L 7187383 intron Dscam2 - chr3L 7187452 intron Dscam2 - chr3L 7187522 intron Dscam2 - chr3L_8_7185001 chr3L_7185001 CanS-JC 1193 chr3L 7233322 7233352 chr3L 7233429 7233459 6 107 0.5 3.5 2.0 2.0 137 chr3L 7233322 intergenic not near genes chr3L 7233390 intergenic not near genes chr3L 7233459 intergenic not near genes chr3L_6_7230001 chr3L_7230001 CanS-JC 1194 chr3L 7236604 7236623 chr3L 7236806 7236825 7 202 1.5 4.5 3.0 1.8 221 chr3L 7236604 intergenic CG14829 - chr3L 7236714 intergenic CG14829 - chr3L 7236825 3` UTR CG14829 - chr3L_7_7235001 chr3L_7235001 CanS-JC 1195 chr3L 7274701 7274736 chr3L 7274831 7274866 5 130 4.0 3.0 3.5 1.1 165 chr3L 7274701 intron unc-13-4A - chr3L 7274784 intron unc-13-4A - chr3L 7274866 intron unc-13-4A - chr3L_5_7270001 chr3L_7270001 CanS-JC 1196 chr3L 7276108 7276167 chr3L 7276213 7276270 4 104 3.0 1.5 2.2 1.2 162 chr3L 7276108 intron unc-13-4A - chr3L 7276189 intron unc-13-4A - chr3L 7276270 intron unc-13-4A - chr3L_4_7275001 chr3L_7275001 CanS-JC 1197 chr3L 7285422 7285478 chr3L 7285526 7285580 6 104 2.5 5.0 3.8 1.2 158 chr3L 7285422 intron unc-13-4A - chr3L 7285501 intron unc-13-4A - chr3L 7285580 intron unc-13-4A - chr3L_6_7285001 chr3L_7285001 CanS-JC 1198 chr3L 7292083 7292120 chr3L 7292189 7292226 5 106 1.5 3.0 2.2 1.6 143 chr3L 7292083 intron unc-13-4A - chr3L 7292154 intron unc-13-4A - chr3L 7292226 intron unc-13-4A - chr3L_5_7290001 chr3L_7290001 CanS-JC 1199 chr3L 7355726 7355773 chr3L 7363607 7363654 14 7881 37.0 29.5 33.2 0.4 7928 chr3L 7355726 exon CTCF - chr3L 7359690 exon pst - chr3L 7363654 exon Sec63 + chr3L_14_7355001 chr3L_7355001 CanS-JC 1200 chr3L 7377292 7377300 chr3L 7380423 7380431 297 6 3131 5.5 0.0 2.8 1.6 3139 chr3L 7377292 intron SMSr - chr3L 7378862 intron SMSr - chr3L 7380431 intron SMSr - chr3L_6_7375001 chr3L_7375001 CanS-JC 1201 chr3L 7447921 7447965 chr3L 7448051 7448084 14 129 4.5 5.0 4.8 2.4 163 chr3L 7447921 intron CG42458 + chr3L 7448002 intron CG42458 + chr3L 7448084 exon CG42458 + chr3L_14_7445001 chr3L_7445001 CanS-JC 1202 chr3L 7498745 7498760 chr3L 7503548 7503563 F-element 5 4803 6.0 5.0 5.5 0.8 4818 chr3L 7498745 5` UTR CG8539 - chr3L 7501154 intergenic not near genes chr3L 7503563 intergenic not near genes chr3L_5_7500001 chr3L_7500001 CanS-JC 1203 chr3L 7508654 7508699 chr3L 7508764 7508809 10 110 2.5 1.0 1.8 3.6 155 chr3L 7508654 intergenic not near genes chr3L 7508732 intergenic not near genes chr3L 7508809 intergenic not near genes chr3L_10_7505001 chr3L_7505001 CanS-JC 1204 chr3L 7532892 7532942 chr3L 7532996 7533045 18 104 3.5 5.0 4.2 3.5 153 chr3L 7532892 intron lqf + chr3L 7532968 intron lqf + chr3L 7533045 intron lqf + chr3L_18_7530001 chr3L_7530001 CanS-JC 1205 chr3L 7572260 7572297 chr3L 7572373 7572405 6 112 10.5 7.0 8.8 0.6 145 chr3L 7572260 intergenic not near genes chr3L 7572332 intergenic not near genes chr3L 7572405 intergenic not near genes chr3L_6_7570001 chr3L_7570001 CanS-JC 1206 chr3L 7591123 7591180 chr3L 7591240 7591297 18 117 5.5 1.5 3.5 4.0 174 chr3L 7591123 intergenic CG7716 - chr3L 7591210 intergenic CG7716 - chr3L 7591297 intergenic CG7716 - chr3L_18_7590001 chr3L_7590001 CanS-JC 1207 chr3L 7752535 7752563 chr3L 7752920 7752948 7 385 4.5 2.5 3.5 1.6 413 chr3L 7752535 intron CG32373 + chr3L 7752742 intron CG32373 + chr3L 7752948 intron CG32373 + chr3L_7_7750001 chr3L_7750001 CanS-JC 1208 chr3L 7775483 7775533 chr3L 7775608 7775658 13 123 7.0 2.5 4.8 2.2 175 chr3L 7775483 intron Clk - chr3L 7775570 5` UTR Clk - chr3L 7775658 intergenic Clk - chr3L_13_7775001 chr3L_7775001 CanS-JC 1209 chr3L 7793693 7793735 chr3L 7800771 7800813 297 10 7078 5.0 7.5 6.2 1.4 7120 chr3L 7793693 intron CG32369 - chr3L 7797253 intron CG32369 - chr3L 7800813 intron CG32369 - chr3L_10_7795001 chr3L_7795001 CanS-JC 1210 chr3L 7801527 7801550 chr3L 7801634 7801657 6 107 6.0 3.0 4.5 1.1 130 chr3L 7801527 intron CG32369 - chr3L 7801592 intron CG32369 - chr3L 7801657 intron CG32369 - chr3L_6_7800001 chr3L_7800001 CanS-JC 1211 chr3L 7814678 7814721 chr3L 7814789 7814832 15 110 3.0 2.5 2.8 3.9 154 chr3L 7814678 3` UTR Pdp1 - chr3L 7814755 3` UTR Pdp1 - chr3L 7814832 3` UTR Pdp1 - chr3L_15_7810001 chr3L_7810001 CanS-JC 1212 chr3L 7869639 7869649 chr3L 7869745 7869755 4 106 9.0 9.5 9.2 0.4 116 chr3L 7869639 exon CG32365 + chr3L 7869697 exon CG32365 + chr3L 7869755 exon CG32365 + chr3L_4_7865001 chr3L_7865001 CanS-JC 1213 chr3L 7876086 7876109 chr3L 7876191 7876214 4 105 0.0 0.0 0.0 4.0 128 chr3L 7876086 intron CG32365 + chr3L 7876150 intron CG32365 + chr3L 7876214 intron CG32365 + chr3L_4_7875001 chr3L_7875001 CanS-JC 1214 chr3L 7885121 7885131 chr3L 7885238 7885248 4 117 9.0 0.0 4.5 0.7 127 chr3L 7885121 intron CG32365 + chr3L 7885184 intron CG32365 + chr3L 7885248 intron CG32365 + chr3L_4_7885001 chr3L_7885001 CanS-JC 1215 chr3L 7916807 7916841 chr3L 7926004 7926038 roo 7 9197 4.0 2.0 3.0 1.8 9231 chr3L 7916807 3` UTR syd - chr3L 7921422 intron syd - chr3L 7926038 3` UTR syd - chr3L_7_7920001 chr3L_7920001 CanS-JC 1216 chr3L 7964669 7964706 chr3L 7964828 7964865 8 159 6.5 4.0 5.2 1.3 196 chr3L 7964669 intergenic not near genes chr3L 7964767 intergenic not near genes chr3L 7964865 intergenic not near genes chr3L_8_7960001 chr3L_7960001 CanS-JC 1217 chr3L 7985347 7985390 chr3L 7987698 7987744 NOF 14 2354 4.0 5.0 4.5 2.5 2397 chr3L 7985347 intron nmo + chr3L 7986546 intron nmo + chr3L 7987744 intron nmo + chr3L_14_7985001 chr3L_7985001 CanS-JC 1218 chr3L 8026467 8026514 chr3L 8026655 8026702 11 188 2.5 3.0 2.8 2.9 235 chr3L 8026467 intron nmo + chr3L 8026584 intron nmo + chr3L 8026702 intron nmo + chr3L_11_8025001 chr3L_8025001 CanS-JC 1219 chr3L 8062821 8062852 chr3L 8062926 8062957 10 105 6.0 7.0 6.5 1.3 136 chr3L 8062821 intergenic not near genes chr3L 8062889 intergenic not near genes chr3L 8062957 intergenic not near genes chr3L_10_8060001 chr3L_8060001 CanS-JC 1220 chr3L 8064639 8064664 chr3L 8064801 8064826 9 162 6.0 3.5 4.8 1.6 187 chr3L 8064639 intron Ect4 + chr3L 8064732 intron Ect4 + chr3L 8064826 intron Ect4 + chr3L_9_8060001 chr3L_8060001 CanS-JC 1221 chr3L 8081406 8081441 chr3L 8081515 8081550 11 109 1.5 6.5 4.0 2.2 144 chr3L 8081406 intron Ect4 + chr3L 8081478 intron Ect4 + chr3L 8081550 intron Ect4 + chr3L_11_8080001 chr3L_8080001 CanS-JC 1222 chr3L 8149754 8149794 chr3L 8149886 8149925 6 132 1.5 4.5 3.0 1.5 171 chr3L 8149754 intron CG13676 - chr3L 8149840 intron CG13676 - chr3L 8149925 intron CG13676 - chr3L_6_8145001 chr3L_8145001 CanS-JC 1223 chr3L 8208102 8208151 chr3L 8208260 8208309 14 157 5.0 3.0 4.0 2.8 207 chr3L 8208102 intergenic not near genes chr3L 8208206 intergenic not near genes chr3L 8208309 intergenic not near genes chr3L_14_8205001 chr3L_8205001 CanS-JC 1224 chr3L 8231405 8231413 chr3L 8231507 8231515 4 102 4.0 3.5 3.8 0.8 110 chr3L 8231405 5` UTR CR43953 + chr3L 8231460 5` UTR CR43953 + chr3L 8231515 5` UTR CR43953 + chr3L_4_8230001 chr3L_8230001 CanS-JC 1225 chr3L 8295779 8295824 chr3L 8295963 8296008 6 184 4.0 5.0 4.5 1.1 229 chr3L 8295779 intergenic CG7201 - chr3L 8295894 intergenic not near genes chr3L 8296008 intergenic not near genes chr3L_6_8295001 chr3L_8295001 CanS-JC 1226 chr3L 8413813 8413871 chr3L 8413918 8413976 8 105 1.0 0.0 0.5 5.3 163 chr3L 8413813 intron,3` UTR Exo70 +,mtrm + chr3L 8413894 intron,3` UTR Exo70 +,mtrm + chr3L 8413976 intron,3` UTR Exo70 +,mtrm + chr3L_8_8410001 chr3L_8410001 CanS-JC 1227 chr3L 8443543 8443580 chr3L 8443650 8443688 10 108 3.5 4.0 3.8 2.1 145 chr3L 8443543 3` UTR CG6983 - chr3L 8443616 3` UTR CG6983 - chr3L 8443688 3` UTR CG6983 - chr3L_10_8440001 chr3L_8440001 CanS-JC 1228 chr3L 8456451 8456484 chr3L 8456568 8456601 5 117 15.5 7.5 11.5 0.4 150 chr3L 8456451 intron Gug + chr3L 8456526 intron Gug + chr3L 8456601 intron Gug + chr3L_5_8455001 chr3L_8455001 CanS-JC 1229 chr3L 8481750 8481800 chr3L 8490935 8490985 roo 16 9184 8.5 5.5 7.0 2.0 9235 chr3L 8481750 intron CG43163 - chr3L 8486368 intron CG43163 - chr3L 8490985 intron CG43163 - chr3L_16_8485001 chr3L_8485001 CanS-JC 1230 chr3L 8497870 8497917 chr3L 8498002 8498049 14 132 2.0 3.0 2.5 4.0 179 chr3L 8497870 intron CG43163 - chr3L 8497960 intron CG43163 - chr3L 8498049 intron CG43163 - chr3L_14_8495001 chr3L_8495001 CanS-JC 1231 chr3L 8498294 8498319 chr3L 8505786 8505812 blood 15 7493 0.0 6.0 3.0 3.8 7518 chr3L 8498294 intron CG43163 - chr3L 8502053 intron CG43163 - chr3L 8505812 intron CG43163 - chr3L_15_8500001 chr3L_8500001 CanS-JC 1232 chr3L 8576248 8576278 chr3L 8576368 8576398 7 118 0.5 4.5 2.5 2.0 150 chr3L 8576248 intergenic CG6638 - chr3L 8576323 intergenic CG6638 -,CG43078 + chr3L 8576398 intergenic CG6638 -,CG43078 + chr3L_7_8575001 chr3L_8575001 CanS-JC 1233 chr3L 8791252 8791295 chr3L 8796698 8796741 I-element 14 5446 9.5 4.5 7.0 1.8 5489 chr3L 8791252 exon Fhos + chr3L 8793996 intron Fhos + chr3L 8796741 intron Fhos + chr3L_14_8790001 chr3L_8790001 CanS-JC 1234 chr3L 9013690 9013695 chr3L 18417066 18417066 5 9403375 22.5 19.5 21.0 0.2 9403376 chr3L 9013690 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_5_13715001 chr3L_13715001 CanS-JC 1235 chr3L 9164675 9164692 chr3L 9166168 9166185 hobo 6 1492 8.5 0.0 4.2 1.2 1510 chr3L 9164675 intron Rdl - chr3L 9165430 intron Rdl - chr3L 9166185 intron Rdl - chr3L_6_9165001 chr3L_9165001 CanS-JC 1236 chr3L 9215171 9215207 chr3L 9215295 9215331 9 124 1.0 6.0 3.5 2.0 160 chr3L 9215171 3` UTR CG4476 + chr3L 9215251 3` UTR CG4476 + chr3L 9215331 intergenic CG4476 + chr3L_9_9215001 chr3L_9215001 CanS-JC 1237 chr3L 9219224 9219268 chr3L 9219917 9219966 jockey 20 698 10.5 7.5 9.0 2.0 742 chr3L 9219224 intergenic not near genes chr3L 9219595 intergenic not near genes chr3L 9219966 intergenic not near genes chr3L_20_9215001 chr3L_9215001 CanS-JC 1238 chr3L 9221324 9221380 chr3L 9221439 9221495 11 112 5.0 3.5 4.2 2.1 171 chr3L 9221324 intergenic not near genes chr3L 9221410 intergenic not near genes chr3L 9221495 intergenic not near genes chr3L_11_9220001 chr3L_9220001 CanS-JC 1239 chr3L 9270617 9270647 chr3L 9278394 9278424 roo 4 7777 5.0 8.5 6.8 0.5 7807 chr3L 9270617 intron GluRIB + chr3L 9274520 intron GluRIB + chr3L 9278424 exon GluRIB + chr3L_4_9270001 chr3L_9270001 CanS-JC 1240 chr3L 9302453 9302482 chr3L 9302564 9302593 7 111 4.5 3.5 4.0 1.4 140 chr3L 9302453 intergenic not near genes chr3L 9302523 intergenic not near genes chr3L 9302593 intergenic not near genes chr3L_7_9300001 chr3L_9300001 CanS-JC 1241 chr3L 9312699 9312731 chr3L 9312803 9312835 10 104 4.5 1.0 2.8 2.6 136 chr3L 9312699 intergenic not near genes chr3L 9312767 intergenic not near genes chr3L 9312835 intergenic not near genes chr3L_10_9310001 chr3L_9310001 CanS-JC 1242 chr3L 9348440 9348704 chr3L 9348968 9349090 16 510 0.0 0.0 0.0 16.0 650 chr3L 9348440 intergenic PGRP-LC + chr3L 9348765 intergenic PGRP-LC + chr3L 9349090 intergenic not near genes chr3L_16_9345001 chr3L_9345001 CanS-JC 1243 chr3L 9359570 9359616 chr3L 9359687 9359733 17 117 2.5 4.5 3.5 3.8 163 chr3L 9359570 3` UTR CG32039 + chr3L 9359652 3` UTR CG32039 + chr3L 9359733 3` UTR CG32039 + chr3L_17_9355001 chr3L_9355001 CanS-JC 1244 chr3L 9369307 9369351 chr3L 9369449 9369493 14 142 7.0 6.0 6.5 1.9 186 chr3L 9369307 3` UTR CG4452 + chr3L 9369400 intron CG4452 + chr3L 9369493 intron CG4452 + chr3L_14_9365001 chr3L_9365001 CanS-JC 1245 chr3L 9443494 9443537 chr3L 9445311 9445354 S-element 8 1815 2.5 4.5 3.5 1.8 1860 chr3L 9443494 intron CG33926 + chr3L 9444424 intron CG33926 + chr3L 9445354 intron CG33926 + chr3L_8_9440001 chr3L_9440001 CanS-JC 1246 chr3L 9494485 9494539 chr3L 9494699 9494753 12 214 4.0 4.0 4.0 2.4 268 chr3L 9494485 intergenic path - chr3L 9494619 3` UTR path - chr3L 9494753 3` UTR path - chr3L_12_9490001 chr3L_9490001 CanS-JC 1247 chr3L 9498177 9498229 chr3L 9498280 9498332 14 103 6.0 2.0 4.0 2.8 155 chr3L 9498177 intron path - chr3L 9498254 intron path - chr3L 9498332 intron path - chr3L_14_9495001 chr3L_9495001 CanS-JC 1248 chr3L 9501683 9501729 chr3L 9502195 9502241 roo 11 512 2.5 7.0 4.8 1.9 558 chr3L 9501683 intron path - chr3L 9501962 intron path - chr3L 9502241 intron path - chr3L_11_9500001 chr3L_9500001 CanS-JC 1249 chr3L 9502589 9502639 chr3L 9502695 9502745 12 106 4.5 3.0 3.8 2.5 156 chr3L 9502589 intron path - chr3L 9502667 intron path - chr3L 9502745 intron path - chr3L_12_9500001 chr3L_9500001 CanS-JC 1250 chr3L 9503438 9503455 chr3L 9503553 9503570 4 115 6.0 13.5 9.8 0.4 132 chr3L 9503438 intron path - chr3L 9503504 intron path - chr3L 9503570 intron path - chr3L_4_9500001 chr3L_9500001 CanS-JC 1251 chr3L 9513426 9513467 chr3L 9513539 9513565 11 112 5.0 3.5 4.2 2.1 139 chr3L 9513426 intergenic CG33702 - chr3L 9513496 intergenic CG33702 - chr3L 9513565 intergenic CG33702 - chr3L_11_9510001 chr3L_9510001 CanS-JC 1252 chr3L 9533732 9533786 chr3L 9541318 9541372 412 19 7586 3.0 6.5 4.8 3.3 7640 chr3L 9533732 intergenic not near genes chr3L 9537552 intergenic not near genes chr3L 9541372 intergenic not near genes chr3L_19_9535001 chr3L_9535001 CanS-JC 1253 chr3L 9571884 9571899 chr3L 9572258 9572273 jockey 4 373 7.0 0.0 3.5 0.9 389 chr3L 9571884 intron CG42673 + chr3L 9572078 intron CG42673 + chr3L 9572273 intron CG42673 + chr3L_4_9570001 chr3L_9570001 CanS-JC 1254 chr3L 9600316 9600375 chr3L 9600441 9600505 5 127 4.5 0.0 2.2 1.6 189 chr3L 9600316 3` UTR CG3222 + chr3L 9600410 intergenic CG3222 +,CG3088 - chr3L 9600505 3` UTR CG3088 - chr3L_5_9600001 chr3L_9600001 CanS-JC 1255 chr3L 9629738 9629760 chr3L 9629840 9629862 9 102 5.0 4.0 4.5 1.6 124 chr3L 9629738 intron CG8336 + chr3L 9629800 intron CG8336 + chr3L 9629862 intron CG8336 + chr3L_9_9625001 chr3L_9625001 CanS-JC 1256 chr3L 9715574 9715622 chr3L 9715676 9715725 8 102 6.0 8.0 7.0 1.0 151 chr3L 9715574 intron vsg + chr3L 9715650 intron vsg + chr3L 9715725 intron vsg + chr3L_8_9715001 chr3L_9715001 CanS-JC 1257 chr3L 9809083 9809121 chr3L 9809185 9809223 4 102 6.0 4.5 5.2 0.6 140 chr3L 9809083 intergenic CG32052 + chr3L 9809153 intergenic CG32052 + chr3L 9809223 intergenic not near genes chr3L_4_9805001 chr3L_9805001 CanS-JC 1258 chr3L 9809713 9809735 chr3L 9809816 9809838 9 103 9.0 10.0 9.5 0.9 125 chr3L 9809713 intergenic not near genes chr3L 9809776 intergenic not near genes chr3L 9809838 intergenic not near genes chr3L_9_9805001 chr3L_9805001 CanS-JC 1259 chr3L 9824134 9824154 chr3L 9824238 9824260 14 106 2.5 0.0 1.2 6.4 126 chr3L 9824134 intron CG43897 + chr3L 9824197 intron CG43897 + chr3L 9824260 intron CG43897 + chr3L_14_9820001 chr3L_9820001 CanS-JC 1260 chr3L 9831681 9831723 chr3L 9831788 9831830 12 107 4.0 2.5 3.2 2.9 149 chr3L 9831681 intron CG43897 + chr3L 9831756 intron CG43897 + chr3L 9831830 intron CG43897 + chr3L_12_9830001 chr3L_9830001 CanS-JC 1261 chr3L 9835413 9835457 chr3L 9835529 9835573 7 116 3.5 3.0 3.2 1.7 160 chr3L 9835413 exon I-2 - chr3L 9835493 intron I-2 - chr3L 9835573 intron I-2 - chr3L_7_9835001 chr3L_9835001 CanS-JC 1262 chr3L 9918783 9918820 chr3L 9919008 9919057 6 236 9.5 6.5 8.0 0.7 274 chr3L 9918783 intron CG34356 + chr3L 9918920 intron CG34356 + chr3L 9919057 intron CG34356 + chr3L_6_9915001 chr3L_9915001 CanS-JC 1263 chr3L 9929648 9929701 chr3L 9938455 9938504 roo 16 8807 3.0 4.5 3.8 3.3 8856 chr3L 9929648 intron CG34356 + chr3L 9934076 intron CG34356 + chr3L 9938504 intron CG34356 + chr3L_16_9930001 chr3L_9930001 CanS-JC 1264 chr3L 10002919 10002945 chr3L 10003040 10003066 10 121 2.0 0.0 1.0 5.0 147 chr3L 10002919 intron dpr6 + chr3L 10002992 intron dpr6 + chr3L 10003066 intron dpr6 + chr3L_10_10000001 chr3L_10000001 CanS-JC 1265 chr3L 10155104 10155146 chr3L 10155419 10155461 10 314 4.0 5.5 4.8 1.7 357 chr3L 10155104 intron dpr10 - chr3L 10155282 intron dpr10 - chr3L 10155461 intron dpr10 - chr3L_10_10155001 chr3L_10155001 CanS-JC 1266 chr3L 10182230 10182281 chr3L 10182342 10182394 15 113 4.5 4.5 4.5 2.7 164 chr3L 10182230 intron dpr10 - chr3L 10182312 5` UTR dpr10 - chr3L 10182394 5` UTR dpr10 - chr3L_15_10180001 chr3L_10180001 CanS-JC 1267 chr3L 10214709 10214829 chr3L 10214822 10214957 11 130 0.0 0.0 0.0 11.0 248 chr3L 10214709 intergenic not near genes chr3L 10214833 intergenic not near genes chr3L 10214957 intergenic not near genes chr3L_11_10210001 chr3L_10210001 CanS-JC 1268 chr3L 10222739 10222771 chr3L 10222845 10222877 10 106 3.5 7.5 5.5 1.5 138 chr3L 10222739 intron scramb1 - chr3L 10222808 intron scramb1 - chr3L 10222877 intron scramb1 - chr3L_10_10220001 chr3L_10220001 CanS-JC 1269 chr3L 10300031 10300076 chr3L 10300149 10300194 5 118 1.5 4.5 3.0 1.2 163 chr3L 10300031 intergenic not near genes chr3L 10300112 intergenic not near genes chr3L 10300194 intergenic not near genes chr3L_5_10300001 chr3L_10300001 CanS-JC 1270 chr3L 10308726 10308766 chr3L 10308829 10308869 20 102 1.5 6.5 4.0 4.0 143 chr3L 10308726 intergenic not near genes chr3L 10308798 intergenic not near genes chr3L 10308869 intergenic not near genes chr3L_20_10305001 chr3L_10305001 CanS-JC 1271 chr3L 10314114 10314155 chr3L 10314226 10314267 10 112 7.0 7.5 7.2 1.2 153 chr3L 10314114 intergenic not near genes chr3L 10314190 intergenic not near genes chr3L 10314267 intergenic not near genes chr3L_10_10310001 chr3L_10310001 CanS-JC 1272 chr3L 10314454 10314507 chr3L 10314560 10314613 14 106 2.5 4.0 3.2 3.3 159 chr3L 10314454 intergenic not near genes chr3L 10314534 intergenic not near genes chr3L 10314613 intergenic not near genes chr3L_14_10310001 chr3L_10310001 CanS-JC 1273 chr3L 10328488 10328499 chr3L 10328851 10328862 4 363 9.5 5.0 7.2 0.5 374 chr3L 10328488 intergenic not near genes chr3L 10328675 intergenic not near genes chr3L 10328862 intergenic not near genes chr3L_4_10325001 chr3L_10325001 CanS-JC 1274 chr3L 10414940 10414967 chr3L 10417338 10417365 Doc 7 2398 3.0 7.0 5.0 1.2 2425 chr3L 10414940 intergenic CG12362 + chr3L 10416152 intergenic not near genes chr3L 10417365 intergenic not near genes chr3L_7_10415001 chr3L_10415001 CanS-JC 1275 chr3L 10417551 10417604 chr3L 10417654 10417707 12 102 9.5 5.0 7.2 1.5 156 chr3L 10417551 intergenic not near genes chr3L 10417629 intergenic not near genes chr3L 10417707 intergenic not near genes chr3L_12_10415001 chr3L_10415001 CanS-JC 1276 chr3L 10446134 10446186 chr3L 10446246 10446298 13 112 2.5 7.0 4.8 2.2 164 chr3L 10446134 intergenic not near genes chr3L 10446216 intergenic not near genes chr3L 10446298 intergenic not near genes chr3L_13_10445001 chr3L_10445001 CanS-JC 1277 chr3L 10469914 10469963 chr3L 10470016 10470065 13 101 3.0 0.5 1.8 4.6 151 chr3L 10469914 intergenic not near genes chr3L 10469990 intergenic not near genes chr3L 10470065 intergenic not near genes chr3L_13_10465001 chr3L_10465001 CanS-JC 1278 chr3L 10514372 10514412 chr3L 10514479 10514519 10 107 2.0 3.5 2.8 2.6 147 chr3L 10514372 intron A2bp1 + chr3L 10514446 intron A2bp1 + chr3L 10514519 intron A2bp1 + chr3L_10_10510001 chr3L_10510001 CanS-JC 1279 chr3L 10520510 10520568 chr3L 10520617 10520672 4 106 0.0 6.0 3.0 1.0 162 chr3L 10520510 intron A2bp1 + chr3L 10520591 intron A2bp1 + chr3L 10520672 intron A2bp1 + chr3L_4_10520001 chr3L_10520001 CanS-JC 1280 chr3L 10538667 10538722 chr3L 10538772 10538827 11 105 2.0 2.0 2.0 3.7 160 chr3L 10538667 intron A2bp1 + chr3L 10538747 intron A2bp1 + chr3L 10538827 intron A2bp1 + chr3L_11_10535001 chr3L_10535001 CanS-JC 1281 chr3L 10551469 10551491 chr3L 10551573 10551604 8 112 0.0 5.0 2.5 2.3 135 chr3L 10551469 intron A2bp1 + chr3L 10551536 intron A2bp1 + chr3L 10551604 intron A2bp1 + chr3L_8_10550001 chr3L_10550001 CanS-JC 1282 chr3L 10598802 10598816 chr3L 10598905 10598919 5 103 6.0 0.5 3.2 1.2 117 chr3L 10598802 intergenic not near genes chr3L 10598860 intergenic not near genes chr3L 10598919 intergenic not near genes chr3L_5_10595001 chr3L_10595001 CanS-JC 1283 chr3L 10600434 10600442 chr3L 10600539 10600550 4 107 8.0 0.0 4.0 0.8 116 chr3L 10600434 intergenic not near genes chr3L 10600492 intergenic not near genes chr3L 10600550 intergenic not near genes chr3L_4_10600001 chr3L_10600001 CanS-JC 1284 chr3L 10621829 10621866 chr3L 10621942 10621974 8 112 1.0 4.0 2.5 2.3 145 chr3L 10621829 intergenic not near genes chr3L 10621902 intergenic not near genes chr3L 10621974 intergenic not near genes chr3L_8_10620001 chr3L_10620001 CanS-JC 1285 chr3L 10625839 10625865 chr3L 10629222 10629248 9 3383 15.5 32.5 24.0 0.4 3409 chr3L 10625839 intergenic CG43127 - chr3L 10627544 intergenic CG34238 +,CG14151 - chr3L 10629248 exon CG42536 - chr3L_9_10625001 chr3L_10625001 CanS-JC 1286 chr3L 10625872 10625897 chr3L 10629255 10629280 6 3383 20.0 28.5 24.2 0.2 3408 chr3L 10625872 intergenic CG43127 - chr3L 10627576 intergenic CG14151 -,CG34238 + chr3L 10629280 exon CG42536 - chr3L_6_10625001 chr3L_10625001 CanS-JC 1287 chr3L 10658057 10658106 chr3L 10658160 10658209 16 103 1.5 3.5 2.5 4.6 152 chr3L 10658057 intron CG32066 - chr3L 10658133 intron CG32066 - chr3L 10658209 intron CG32066 - chr3L_16_10655001 chr3L_10655001 CanS-JC 1288 chr3L 10714483 10714529 chr3L 10715725 10715771 5 1242 2.0 18.5 10.2 0.4 1288 chr3L 10714483 intergenic not near genes chr3L 10715127 intergenic not near genes chr3L 10715771 intergenic not near genes chr3L_5_10715001 chr3L_10715001 CanS-JC 1289 chr3L 10721975 10722002 chr3L 10722083 10722110 4 108 0.0 0.0 0.0 4.0 135 chr3L 10721975 intergenic not near genes chr3L 10722042 intergenic not near genes chr3L 10722110 intergenic not near genes chr3L_4_10720001 chr3L_10720001 CanS-JC 1290 chr3L 10743495 10743504 chr3L 10743600 10743609 4 105 0.0 3.5 1.8 1.4 114 chr3L 10743495 intergenic not near genes chr3L 10743552 intergenic not near genes chr3L 10743609 intergenic not near genes chr3L_4_10740001 chr3L_10740001 CanS-JC 1291 chr3L 10800742 10800769 chr3L 10800864 10800891 5 122 6.0 2.0 4.0 1.0 149 chr3L 10800742 intergenic CG12523 + chr3L 10800816 intergenic CG12523 + chr3L 10800891 intergenic CG12523 + chr3L_5_10800001 chr3L_10800001 CanS-JC 1292 chr3L 11032322 11032374 chr3L 11032565 11032617 23 243 4.5 4.0 4.2 4.4 295 chr3L 11032322 intergenic not near genes chr3L 11032470 intergenic not near genes chr3L 11032617 intergenic not near genes chr3L_23_11030001 chr3L_11030001 CanS-JC 1293 chr3L 11052314 11052361 chr3L 11052418 11052465 10 104 2.5 3.0 2.8 2.6 151 chr3L 11052314 intergenic not near genes chr3L 11052390 intergenic not near genes chr3L 11052465 intergenic not near genes chr3L_10_11050001 chr3L_11050001 CanS-JC 1294 chr3L 11071393 11071448 chr3L 11071505 11071562 8 114 0.0 0.0 0.0 8.0 169 chr3L 11071393 intron Mocs1 + chr3L 11071478 intron Mocs1 + chr3L 11071562 exon Mocs1 + chr3L_8_11070001 chr3L_11070001 CanS-JC 1295 chr3L 11087045 11087088 chr3L 11088859 11088903 S-element 11 1814 3.5 2.0 2.8 2.9 1858 chr3L 11087045 intron JIL-1 - chr3L 11087974 intron JIL-1 - chr3L 11088903 intron JIL-1 - chr3L_11_11085001 chr3L_11085001 CanS-JC 1296 chr3L 11135507 11135532 chr3L 11135763 11135788 8 256 0.5 0.0 0.2 6.7 281 chr3L 11135507 intergenic CG14143 + chr3L 11135648 intergenic CG14143 +,CG32082 + chr3L 11135788 intergenic CG32082 +,CG14143 + chr3L_8_11135001 chr3L_11135001 CanS-JC 1297 chr3L 11180632 11180658 chr3L 11180766 11180792 16 134 2.0 7.0 4.5 2.9 160 chr3L 11180632 intron GlcAT-P - chr3L 11180712 intron GlcAT-P - chr3L 11180792 intron GlcAT-P - chr3L_16_11180001 chr3L_11180001 CanS-JC 1298 chr3L 11187717 11187742 chr3L 11187824 11187849 4 107 0.0 9.0 4.5 0.7 132 chr3L 11187717 intron GlcAT-P - chr3L 11187783 intron GlcAT-P - chr3L 11187849 intron GlcAT-P - chr3L_4_11185001 chr3L_11185001 CanS-JC 1299 chr3L 11241770 11241790 chr3L 11241867 11241898 6 106 1.0 1.5 1.2 2.7 128 chr3L 11241770 intergenic not near genes chr3L 11241834 intergenic not near genes chr3L 11241898 intergenic not near genes chr3L_6_11240001 chr3L_11240001 CanS-JC 1300 chr3L 11277425 11277471 chr3L 11278451 11278491 Rt1a 8 1021 0.0 4.5 2.2 2.5 1066 chr3L 11277425 intergenic not near genes chr3L 11277958 intergenic not near genes chr3L 11278491 intergenic not near genes chr3L_8_11275001 chr3L_11275001 CanS-JC 1301 chr3L 11285177 11285233 chr3L 11285354 11285410 5 177 2.5 0.0 1.2 2.3 233 chr3L 11285177 5` UTR CR45404 + chr3L 11285294 intergenic CR45404 + chr3L 11285410 intergenic CR45404 + chr3L_5_11285001 chr3L_11285001 CanS-JC 1302 chr3L 11303028 11303038 chr3L 11303140 11303147 8 112 1.5 0.0 0.8 4.4 119 chr3L 11303028 intergenic not near genes chr3L 11303088 intergenic not near genes chr3L 11303147 intergenic not near genes chr3L_8_11300001 chr3L_11300001 CanS-JC 1303 chr3L 11304816 11304818 chr3L 11304939 11304941 4 123 0.0 0.0 0.0 4.0 125 chr3L 11304816 intergenic not near genes chr3L 11304878 intergenic not near genes chr3L 11304941 intergenic not near genes chr3L_4_11300001 chr3L_11300001 CanS-JC 1304 chr3L 11329683 11329725 chr3L 11332914 11332956 jockey 13 3231 2.0 10.0 6.0 1.9 3273 chr3L 11329683 intergenic not near genes chr3L 11331320 intergenic not near genes chr3L 11332956 intergenic not near genes chr3L_13_11330001 chr3L_11330001 CanS-JC 1305 chr3L 11345655 11345704 chr3L 11345889 11345938 11 234 3.0 3.0 3.0 2.8 283 chr3L 11345655 intergenic not near genes chr3L 11345796 intergenic not near genes chr3L 11345938 intergenic not near genes chr3L_11_11345001 chr3L_11345001 CanS-JC 1306 chr3L 11383939 11383963 chr3L 11384044 11384062 9 104 9.5 3.5 6.5 1.2 123 chr3L 11383939 intron CR42755 - chr3L 11384000 3` UTR CR42755 - chr3L 11384062 3` UTR CR42755 - chr3L_9_11380001 chr3L_11380001 CanS-JC 1307 chr3L 11441360 11441381 chr3L 11441465 11441486 4 105 0.0 1.5 0.8 2.2 126 chr3L 11441360 intergenic not near genes chr3L 11441423 intergenic not near genes chr3L 11441486 intergenic not near genes chr3L_4_11440001 chr3L_11440001 CanS-JC 1308 chr3L 11456887 11456905 chr3L 11457012 11457030 6 125 1.0 2.5 1.8 2.1 143 chr3L 11456887 intergenic CG12289 - chr3L 11456958 intergenic CG12289 - chr3L 11457030 intergenic CG12289 - chr3L_6_11455001 chr3L_11455001 CanS-JC 1309 chr3L 11476664 11476696 chr3L 11477202 11477234 11 538 1.5 5.0 3.2 2.6 570 chr3L 11476664 intergenic not near genes chr3L 11476949 intergenic not near genes chr3L 11477234 intergenic not near genes chr3L_11_11475001 chr3L_11475001 CanS-JC 1310 chr3L 11488878 11488903 chr3L 11489018 11489043 7 140 1.5 6.0 3.8 1.5 165 chr3L 11488878 intron chrb + chr3L 11488960 intron chrb + chr3L 11489043 intron chrb + chr3L_7_11485001 chr3L_11485001 CanS-JC 1311 chr3L 11488906 11488921 chr3L 11489012 11489061 4 132 0.5 5.5 3.0 1.0 155 chr3L 11488906 intron chrb + chr3L 11488984 intron chrb + chr3L 11489061 intron chrb + chr3L_4_11485001 chr3L_11485001 CanS-JC 1312 chr3L 11579552 11579583 chr3L 11579684 11579715 8 132 3.0 4.0 3.5 1.8 163 chr3L 11579552 intergenic CG43390 - chr3L 11579634 intergenic CG43390 - chr3L 11579715 intergenic CG43390 - chr3L_8_11575001 chr3L_11575001 CanS-JC 1313 chr3L 11580630 11580661 chr3L 11580744 11580775 7 114 0.0 4.5 2.2 2.2 145 chr3L 11580630 intergenic CG43391 - chr3L 11580702 intergenic CG43391 - chr3L 11580775 intergenic CG43391 - chr3L_7_11580001 chr3L_11580001 CanS-JC 1314 chr3L 11663088 11663138 chr3L 11663291 11663341 14 203 4.0 0.0 2.0 4.7 253 chr3L 11663088 intron CG32085 - chr3L 11663214 intron CG32085 - chr3L 11663341 intron CG32085 - chr3L_14_11660001 chr3L_11660001 CanS-JC 1315 chr3L 11678085 11678117 chr3L 11678198 11678230 11 113 2.5 2.5 2.5 3.1 145 chr3L 11678085 intron CG32085 - chr3L 11678158 intron CG32085 - chr3L 11678230 intron CG32085 - chr3L_11_11675001 chr3L_11675001 CanS-JC 1316 chr3L 11723061 11723105 chr3L 11727882 11727926 Doc 11 4821 2.5 4.0 3.2 2.6 4865 chr3L 11723061 3` UTR Bmcp + chr3L 11725494 intron Bmcp + chr3L 11727926 3` UTR Bmcp + chr3L_11_11725001 chr3L_11725001 CanS-JC 1317 chr3L 11743993 11744046 chr3L 11744127 11744180 7 134 4.5 1.5 3.0 1.8 187 chr3L 11743993 exon CG6024 - chr3L 11744086 intron CG6024 - chr3L 11744180 intron CG6024 - chr3L_7_11740001 chr3L_11740001 CanS-JC 1318 chr3L 11757903 11757930 chr3L 11758026 11758053 4 123 5.5 0.0 2.8 1.1 150 chr3L 11757903 intron CG6024 - chr3L 11757978 intron CG6024 - chr3L 11758053 intron CG6024 - chr3L_4_11755001 chr3L_11755001 CanS-JC 1319 chr3L 9313027 9313027 chr3L 11777678 11777678 4 2464651 19.0 20.0 19.5 0.2 2464651 chr3L 9313027 intergenic not near genes chr3L 10545352 intron A2bp1 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_4_10545001 chr3L_10545001 CanS-JC 1320 chr3L 11826536 11826587 chr3L 11826670 11826721 19 133 3.5 5.0 4.2 3.7 185 chr3L 11826536 intergenic CycA - chr3L 11826628 intergenic CycA - chr3L 11826721 3` UTR CycA - chr3L_19_11825001 chr3L_11825001 CanS-JC 1321 chr3L 11887232 11887286 chr3L 11887355 11887418 5 125 3.0 0.0 1.5 2.0 186 chr3L 11887232 intron CG44837 - chr3L 11887325 intron,3` UTR CG44837 -,CG5897 - chr3L 11887418 intron,3` UTR CG44837 -,CG5897 - chr3L_5_11885001 chr3L_11885001 CanS-JC 1322 chr3L 11943481 11943520 chr3L 11943608 11943647 8 127 3.5 9.5 6.5 1.1 166 chr3L 11943481 3` UTR Rpt4R + chr3L 11943564 intergenic CG5883 -,Rpt4R + chr3L 11943647 3` UTR CG5883 - chr3L_8_11940001 chr3L_11940001 CanS-JC 1323 chr3L 11961178 11961220 chr3L 11961308 11961319 13 128 8.5 7.0 7.8 1.5 141 chr3L 11961178 exon prc - chr3L 11961248 exon prc - chr3L 11961319 exon prc - chr3L_13_11960001 chr3L_11960001 CanS-JC 1324 chr3L 11961961 11961964 chr3L 11964347 11964358 5 2392 16.0 10.5 13.2 0.4 2397 chr3L 11961961 exon prc - chr3L 11963160 exon prc - chr3L 11964358 intron prc - chr3L_5_11960001 chr3L_11960001 CanS-JC 1325 chr3L 11998312 11998341 chr3L 11998422 11998451 15 110 0.5 6.5 3.5 3.3 139 chr3L 11998312 intergenic Pop2 -,Grip163 - chr3L 11998382 intergenic Pop2 -,Grip163 - chr3L 11998451 3` UTR Pop2 - chr3L_15_11995001 chr3L_11995001 CanS-JC 1326 chr3L 12013886 12013935 chr3L 12014003 12014049 18 117 4.0 6.5 5.2 2.9 163 chr3L 12013886 intron rols - chr3L 12013968 intron rols - chr3L 12014049 intron rols - chr3L_18_12010001 chr3L_12010001 CanS-JC 1327 chr3L 12060475 12060520 chr3L 12060589 12060634 22 114 4.0 3.5 3.8 4.6 159 chr3L 12060475 intron rols - chr3L 12060554 intron rols - chr3L 12060634 intron rols - chr3L_22_12060001 chr3L_12060001 CanS-JC 1328 chr3L 12067075 12067077 chr3L 12067138 12067182 4 94 0.0 0.0 0.0 4.0 107 chr3L 12067075 intergenic Sema-5c - chr3L 12067128 intergenic Sema-5c - chr3L 12067182 intergenic Sema-5c - chr3L_4_12065001 chr3L_12065001 CanS-JC 1329 chr3L 12075402 12075417 chr3L 12075517 12075532 7 114 9.0 0.0 4.5 1.3 130 chr3L 12075402 intron Sema-5c - chr3L 12075467 intron Sema-5c - chr3L 12075532 intron Sema-5c - chr3L_7_12075001 chr3L_12075001 CanS-JC 1330 chr3L 12089073 12089110 chr3L 12089179 12089216 10 106 4.0 7.5 5.8 1.5 143 chr3L 12089073 3` UTR CG17154 + chr3L 12089144 3` UTR CG17154 + chr3L 12089216 3` UTR CG17154 + chr3L_10_12085001 chr3L_12085001 CanS-JC 1331 chr3L 12092393 12092421 chr3L 12092496 12092524 4 103 2.0 8.5 5.2 0.6 131 chr3L 12092393 intergenic not near genes chr3L 12092458 intergenic not near genes chr3L 12092524 intergenic not near genes chr3L_4_12090001 chr3L_12090001 CanS-JC 1332 chr3L 12170766 12170817 chr3L 12170874 12170925 17 107 0.0 5.0 2.5 4.9 159 chr3L 12170766 intron Rh7 - chr3L 12170846 intron Rh7 - chr3L 12170925 intron Rh7 - chr3L_17_12170001 chr3L_12170001 CanS-JC 1333 chr3L 12208219 12208249 chr3L 12208323 12208353 6 104 6.5 2.5 4.5 1.1 134 chr3L 12208219 intron app - chr3L 12208286 intron app - chr3L 12208353 intron app - chr3L_6_12205001 chr3L_12205001 CanS-JC 1334 chr3L 12297464 12297467 chr3L 12297650 12297653 4 186 3.0 0.0 1.5 1.6 189 chr3L 12297464 intergenic not near genes chr3L 12297558 intergenic not near genes chr3L 12297653 intergenic not near genes chr3L_4_12295001 chr3L_12295001 CanS-JC 1335 chr3L 12300821 12300878 chr3L 12300986 12301043 12 165 7.5 2.5 5.0 2.0 222 chr3L 12300821 intergenic CR44550 + chr3L 12300932 intergenic CR44550 + chr3L 12301043 5` UTR CR44550 + chr3L_12_12300001 chr3L_12300001 CanS-JC 1336 chr3L 12304066 12304117 chr3L 12304168 12304219 16 102 2.0 4.0 3.0 4.0 153 chr3L 12304066 intergenic not near genes chr3L 12304142 intergenic not near genes chr3L 12304219 intergenic not near genes chr3L_16_12300001 chr3L_12300001 CanS-JC 1337 chr3L 12349802 12349858 chr3L 12350035 12350093 20 235 2.5 2.5 2.5 5.7 291 chr3L 12349802 intron CrzR - chr3L 12349948 intron CrzR - chr3L 12350093 intron CrzR - chr3L_20_12345001 chr3L_12345001 CanS-JC 1338 chr3L 12362578 12362627 chr3L 12362734 12362783 18 155 5.0 5.5 5.2 2.9 205 chr3L 12362578 intergenic not near genes chr3L 12362680 intergenic not near genes chr3L 12362783 intergenic not near genes chr3L_18_12360001 chr3L_12360001 CanS-JC 1339 chr3L 12369511 12369564 chr3L 12369627 12369680 9 116 4.0 2.5 3.2 2.1 169 chr3L 12369511 intron Ncc69 - chr3L 12369596 intron Ncc69 - chr3L 12369680 intron Ncc69 - chr3L_9_12365001 chr3L_12365001 CanS-JC 1340 chr3L 12446243 12446298 chr3L 12446347 12446382 12 100 5.5 5.5 5.5 1.8 139 chr3L 12446243 intergenic not near genes chr3L 12446312 intergenic not near genes chr3L 12446382 intergenic not near genes chr3L_12_12445001 chr3L_12445001 CanS-JC 1341 chr3L 12467234 12467281 chr3L 12467345 12467392 9 111 0.0 5.0 2.5 2.6 158 chr3L 12467234 intron eyg - chr3L 12467313 intron eyg - chr3L 12467392 intron eyg - chr3L_9_12465001 chr3L_12465001 CanS-JC 1342 chr3L 12555598 12555655 chr3L 12555718 12555775 15 119 2.0 2.5 2.2 4.7 177 chr3L 12555598 intron sowah - chr3L 12555686 intron sowah - chr3L 12555775 intron sowah - chr3L_15_12555001 chr3L_12555001 CanS-JC 1343 chr3L 12605727 12605746 chr3L 12605833 12605852 5 106 3.0 9.5 6.2 0.7 125 chr3L 12605727 intergenic not near genes chr3L 12605790 intergenic not near genes chr3L 12605852 intergenic not near genes chr3L_5_12605001 chr3L_12605001 CanS-JC 1344 chr3L 12620948 12620973 chr3L 12621072 12621097 9 124 10.0 8.0 9.0 0.9 149 chr3L 12620948 3` UTR caup + chr3L 12621022 3` UTR caup + chr3L 12621097 3` UTR caup + chr3L_9_12620001 chr3L_12620001 CanS-JC 1345 chr3L 12626149 12626188 chr3L 12626284 12626323 13 135 5.5 3.0 4.2 2.5 174 chr3L 12626149 intergenic not near genes chr3L 12626236 intergenic not near genes chr3L 12626323 intergenic not near genes chr3L_13_12625001 chr3L_12625001 CanS-JC 1346 chr3L 12799821 12799831 chr3L 12799955 12799965 5 134 5.5 8.0 6.8 0.6 144 chr3L 12799821 intron Atg1 - chr3L 12799893 intron Atg1 - chr3L 12799965 intron Atg1 - chr3L_5_12795001 chr3L_12795001 CanS-JC 1347 chr3L 12857988 12858001 chr3L 12858108 12858121 4 120 1.0 2.5 1.8 1.4 133 chr3L 12857988 3` UTR CG32107 - chr3L 12858054 3` UTR CG32107 - chr3L 12858121 3` UTR CG32107 - chr3L_4_12855001 chr3L_12855001 CanS-JC 1348 chr3L 12868005 12868058 chr3L 12868117 12868170 19 112 5.0 3.0 4.0 3.8 165 chr3L 12868005 intergenic not near genes chr3L 12868088 intergenic not near genes chr3L 12868170 intergenic not near genes chr3L_19_12865001 chr3L_12865001 CanS-JC 1349 chr3L 12874917 12874951 chr3L 12877235 12877269 jockey 5 2318 9.0 5.0 7.0 0.6 2352 chr3L 12874917 intergenic not near genes chr3L 12876093 intergenic not near genes chr3L 12877269 intergenic not near genes chr3L_5_12875001 chr3L_12875001 CanS-JC 1350 chr3L 12892897 12892907 chr3L 12893029 12893038 6 132 4.5 1.0 2.8 1.6 141 chr3L 12892897 intron CG14118 + chr3L 12892968 intron CG14118 + chr3L 12893038 intron CG14118 + chr3L_6_12890001 chr3L_12890001 CanS-JC 1351 chr3L 12894788 12894808 chr3L 12894892 12894912 7 104 6.0 6.5 6.2 1.0 124 chr3L 12894788 intergenic CG14118 + chr3L 12894850 intergenic CG14118 + chr3L 12894912 intergenic CG14118 + chr3L_7_12890001 chr3L_12890001 CanS-JC 1352 chr3L 12919256 12919273 chr3L 12924755 12924772 Rt1c 6 5499 8.5 1.5 5.0 1.0 5516 chr3L 12919256 intergenic not near genes chr3L 12922014 intergenic not near genes chr3L 12924772 intergenic not near genes chr3L_6_12920001 chr3L_12920001 CanS-JC 1353 chr3L 12936654 12936706 chr3L 12936766 12936818 17 112 5.0 4.0 4.5 3.1 164 chr3L 12936654 intergenic not near genes chr3L 12936736 intergenic not near genes chr3L 12936818 intergenic not near genes chr3L_17_12935001 chr3L_12935001 CanS-JC 1354 chr3L 12955103 12955156 chr3L 12955205 12955258 11 102 6.5 5.5 6.0 1.6 155 chr3L 12955103 intergenic CG10752 - chr3L 12955180 intergenic not near genes chr3L 12955258 intergenic not near genes chr3L_11_12955001 chr3L_12955001 CanS-JC 1355 chr3L 12957780 12957814 chr3L 12962288 12962322 copia 9 4508 6.5 4.0 5.2 1.5 4542 chr3L 12957780 intergenic not near genes chr3L 12960051 intergenic not near genes chr3L 12962322 intergenic not near genes chr3L_9_12960001 chr3L_12960001 CanS-JC 1356 chr3L 13001739 13001755 chr3L 13002747 13002769 5 1013 0.5 12.0 6.2 0.7 1030 chr3L 13001739 intergenic not near genes chr3L 13002254 intergenic not near genes chr3L 13002769 intergenic not near genes chr3L_5_13000001 chr3L_13000001 CanS-JC 1357 chr3L 13056459 13056730 chr3L 13056642 13056841 14 116 0.0 0.0 0.0 14.0 382 chr3L 13056459 intergenic not near genes chr3L 13056650 intergenic not near genes chr3L 13056841 intergenic not near genes chr3L_14_13055001 chr3L_13055001 CanS-JC 1358 chr3L 13069534 13069587 chr3L 13069639 13069692 10 105 2.5 4.0 3.2 2.4 158 chr3L 13069534 intergenic not near genes chr3L 13069613 intergenic not near genes chr3L 13069692 intergenic not near genes chr3L_10_13065001 chr3L_13065001 CanS-JC 1359 chr3L 13091252 13091299 chr3L 13091354 13091403 8 102 4.5 7.0 5.8 1.2 151 chr3L 13091252 intergenic not near genes chr3L 13091328 intergenic not near genes chr3L 13091403 intergenic not near genes chr3L_8_13090001 chr3L_13090001 CanS-JC 1360 chr3L 13095789 13095825 chr3L 13095903 13095939 9 114 2.5 0.0 1.2 4.1 150 chr3L 13095789 intergenic not near genes chr3L 13095864 intergenic not near genes chr3L 13095939 intergenic not near genes chr3L_9_13095001 chr3L_13095001 CanS-JC 1361 chr3L 13159274 13159294 chr3L 13159379 13159399 6 105 3.5 6.0 4.8 1.0 125 chr3L 13159274 intergenic not near genes chr3L 13159336 intergenic not near genes chr3L 13159399 intergenic not near genes chr3L_6_13155001 chr3L_13155001 CanS-JC 1362 chr3L 13206209 13206265 chr3L 13206317 13206373 21 108 1.0 4.0 2.5 6.0 164 chr3L 13206209 intergenic not near genes chr3L 13206291 intergenic not near genes chr3L 13206373 intergenic not near genes chr3L_21_13205001 chr3L_13205001 CanS-JC 1363 chr3L 13235740 13235772 chr3L 13235845 13235882 10 109 5.5 10.0 7.8 1.1 142 chr3L 13235740 intron caps + chr3L 13235811 intron caps + chr3L 13235882 intron caps + chr3L_10_13235001 chr3L_13235001 CanS-JC 1364 chr3L 13337147 13337157 chr3L 13337268 13337278 6 121 0.0 3.5 1.8 2.1 131 chr3L 13337147 intergenic not near genes chr3L 13337212 intergenic not near genes chr3L 13337278 intergenic not near genes chr3L_6_13335001 chr3L_13335001 CanS-JC 1365 chr3L 13338270 13338301 chr3L 13338392 13338423 7 122 7.0 8.0 7.5 0.8 153 chr3L 13338270 intergenic not near genes chr3L 13338346 intergenic not near genes chr3L 13338423 intergenic not near genes chr3L_7_13335001 chr3L_13335001 CanS-JC 1366 chr3L 13392739 13392759 chr3L 13392848 13392868 8 109 6.5 0.0 3.2 1.9 129 chr3L 13392739 intergenic not near genes chr3L 13392804 intergenic not near genes chr3L 13392868 intergenic not near genes chr3L_8_13390001 chr3L_13390001 CanS-JC 1367 chr3L 13397574 13397627 chr3L 13397688 13397741 10 114 3.0 2.5 2.8 2.6 167 chr3L 13397574 intron sens - chr3L 13397658 intron sens - chr3L 13397741 intron sens - chr3L_10_13395001 chr3L_13395001 CanS-JC 1368 chr3L 13400515 13400544 chr3L 13400617 13400646 17 102 0.0 4.0 2.0 5.7 131 chr3L 13400515 intron sens - chr3L 13400580 intron sens - chr3L 13400646 intron sens - chr3L_17_13400001 chr3L_13400001 CanS-JC 1369 chr3L 13525134 13525183 chr3L 13532956 13533005 roo 9 7822 8.5 4.0 6.2 1.2 7871 chr3L 13525134 intergenic not near genes chr3L 13529070 intergenic not near genes chr3L 13533005 intergenic not near genes chr3L_9_13525001 chr3L_13525001 CanS-JC 1370 chr3L 13573264 13573318 chr3L 13573366 13573420 9 100 4.5 6.5 5.5 1.4 156 chr3L 13573264 intron bru-3 - chr3L 13573342 intron bru-3 - chr3L 13573420 intron bru-3 - chr3L_9_13570001 chr3L_13570001 CanS-JC 1371 chr3L 13644089 13644134 chr3L 13644525 13644570 11 436 3.5 5.5 4.5 2.0 481 chr3L 13644089 intron bru-3 - chr3L 13644330 intron bru-3 - chr3L 13644570 intron bru-3 - chr3L_11_13640001 chr3L_13640001 CanS-JC 1372 chr3L 13670573 13670616 chr3L 13670976 13671021 12 404 2.5 6.5 4.5 2.2 448 chr3L 13670573 intron bru-3 - chr3L 13670797 intron bru-3 - chr3L 13671021 intron bru-3 - chr3L_12_13670001 chr3L_13670001 CanS-JC 1373 chr3L 13671736 13671797 chr3L 13671906 13671967 8 170 5.5 2.5 4.0 1.6 231 chr3L 13671736 intron bru-3 - chr3L 13671852 intron bru-3 - chr3L 13671967 intron bru-3 - chr3L_8_13670001 chr3L_13670001 CanS-JC 1374 chr3L 13740006 13740048 chr3L 13740124 13740166 7 118 1.0 2.0 1.5 2.8 160 chr3L 13740006 intron bru-3 - chr3L 13740086 intron bru-3 - chr3L 13740166 intron bru-3 - chr3L_7_13740001 chr3L_13740001 CanS-JC 1375 chr3L 13751343 13751388 chr3L 13751446 13751491 11 103 1.0 1.5 1.2 5.0 148 chr3L 13751343 intron bru-3 - chr3L 13751417 intron bru-3 - chr3L 13751491 intron bru-3 - chr3L_11_13750001 chr3L_13750001 CanS-JC 1376 chr3L 13763480 13763532 chr3L 13763841 13763893 7 361 1.5 1.5 1.5 2.8 413 chr3L 13763480 intron bru-3 - chr3L 13763686 intron bru-3 - chr3L 13763893 intron bru-3 - chr3L_7_13760001 chr3L_13760001 CanS-JC 1377 chr3L 13766881 13766910 chr3L 13767005 13767034 7 124 7.5 6.5 7.0 0.9 153 chr3L 13766881 intron bru-3 - chr3L 13766958 intron bru-3 - chr3L 13767034 intron bru-3 - chr3L_7_13765001 chr3L_13765001 CanS-JC 1378 chr3L 13804529 13804571 chr3L 13822841 13822883 roo 17 18312 2.0 5.0 3.5 3.8 18354 chr3L 13804529 intergenic not near genes chr3L 13813706 intergenic not near genes chr3L 13822883 intergenic not near genes chr3L_17_13810001 chr3L_13810001 CanS-JC 1379 chr3L 13841131 13841161 chr3L 13841244 13841274 5 113 3.0 1.5 2.2 1.6 143 chr3L 13841131 3` UTR CG8757 - chr3L 13841202 3` UTR CG8757 - chr3L 13841274 exon CG8757 - chr3L_5_13840001 chr3L_13840001 CanS-JC 1380 chr3L 13901548 13901592 chr3L 13901651 13901695 9 103 8.0 8.0 8.0 1.0 147 chr3L 13901548 intron dysc - chr3L 13901622 intron dysc - chr3L 13901695 5` UTR dysc - chr3L_9_13900001 chr3L_13900001 CanS-JC 1381 chr3L 13920407 13920418 chr3L 13920513 13920524 8 106 4.5 3.0 3.8 1.7 117 chr3L 13920407 intron Rgl - chr3L 13920466 intron Rgl - chr3L 13920524 intron Rgl - chr3L_8_13920001 chr3L_13920001 CanS-JC 1382 chr3L 13931309 13931371 chr3L 13931440 13931502 6 131 2.0 0.0 1.0 3.0 193 chr3L 13931309 intron Gl + chr3L 13931406 intron Gl + chr3L 13931502 intron Gl + chr3L_6_13930001 chr3L_13930001 CanS-JC 1383 chr3L 13936468 13936642 chr3L 13936573 13936802 11 115 0.5 0.5 0.5 7.3 334 chr3L 13936468 intergenic not near genes chr3L 13936635 intergenic not near genes chr3L 13936802 intergenic not near genes chr3L_11_13935001 chr3L_13935001 CanS-JC 1384 chr3L 13957867 13957903 chr3L 13958086 13958111 14 218 4.0 7.0 5.5 2.2 244 chr3L 13957867 intron CG32137 + chr3L 13957989 intron CG32137 + chr3L 13958111 intron CG32137 + chr3L_14_13955001 chr3L_13955001 CanS-JC 1385 chr3L 14099413 14099441 chr3L 14099529 14099557 10 116 0.5 8.0 4.2 1.9 144 chr3L 14099413 intergenic not near genes chr3L 14099485 intergenic not near genes chr3L 14099557 intergenic not near genes chr3L_10_14095001 chr3L_14095001 CanS-JC 1386 chr3L 14169234 14169287 chr3L 14169350 14169414 15 120 6.5 0.5 3.5 3.3 180 chr3L 14169234 intergenic not near genes chr3L 14169324 intergenic not near genes chr3L 14169414 intergenic not near genes chr3L_15_14165001 chr3L_14165001 CanS-JC 1387 chr3L 14194696 14194741 chr3L 14194798 14194843 10 102 4.5 2.5 3.5 2.2 147 chr3L 14194696 intron nuf + chr3L 14194770 intron nuf + chr3L 14194843 intron nuf + chr3L_10_14190001 chr3L_14190001 CanS-JC 1388 chr3L 14208324 14208359 chr3L 14208534 14208569 7 210 3.0 4.5 3.8 1.5 245 chr3L 14208324 intron nuf + chr3L 14208446 intron nuf + chr3L 14208569 intron nuf + chr3L_7_14205001 chr3L_14205001 CanS-JC 1389 chr3L 14239972 14240006 chr3L 14240095 14240129 14 123 2.0 5.0 3.5 3.1 157 chr3L 14239972 intergenic not near genes chr3L 14240050 intergenic not near genes chr3L 14240129 intergenic not near genes chr3L_14_14240001 chr3L_14240001 CanS-JC 1390 chr3L 14245545 14245590 chr3L 14245665 14245710 1360 14 120 7.5 5.0 6.2 1.9 165 chr3L 14245545 3` UTR CR44561 - chr3L 14245628 3` UTR CR44561 - chr3L 14245710 intergenic CR44561 -,CR44560 + chr3L_14_14245001 chr3L_14245001 CanS-JC 1391 chr3L 14295964 14296012 chr3L 14296476 14296502 roo 8 509 4.5 5.0 4.8 1.4 538 chr3L 14295964 intron fz + chr3L 14296233 intron fz + chr3L 14296502 intron fz + chr3L_8_14295001 chr3L_14295001 CanS-JC 1392 chr3L 14312016 14312051 chr3L 14316856 14316890 X-element 9 4840 8.0 6.0 7.0 1.1 4874 chr3L 14312016 exon fz + chr3L 14314453 intron fz + chr3L 14316890 intron fz + chr3L_9_14310001 chr3L_14310001 CanS-JC 1393 chr3L 14395633 14395663 chr3L 14395763 14395793 6 130 10.5 5.0 7.8 0.7 160 chr3L 14395633 intergenic not near genes chr3L 14395713 intergenic not near genes chr3L 14395793 intergenic not near genes chr3L_6_14395001 chr3L_14395001 CanS-JC 1394 chr3L 14462878 14462903 chr3L 14462992 14463013 6 113 1.0 6.0 3.5 1.3 135 chr3L 14462878 intron bbg - chr3L 14462946 intron bbg - chr3L 14463013 intron bbg - chr3L_6_14460001 chr3L_14460001 CanS-JC 1395 chr3L 14468434 14468474 chr3L 14473666 14473706 copia 13 5232 3.5 2.5 3.0 3.2 5272 chr3L 14468434 intron bbg - chr3L 14471070 intron bbg - chr3L 14473706 intron bbg - chr3L_13_14470001 chr3L_14470001 CanS-JC 1396 chr3L 14485993 14486029 chr3L 14486100 14486136 12 107 5.0 1.5 3.2 2.9 143 chr3L 14485993 intron bbg - chr3L 14486064 intron bbg - chr3L 14486136 intron bbg - chr3L_12_14485001 chr3L_14485001 CanS-JC 1397 chr3L 14522075 14522123 chr3L 14522200 14522248 11 125 3.5 3.5 3.5 2.4 173 chr3L 14522075 intron bbg - chr3L 14522162 intron bbg - chr3L 14522248 intron bbg - chr3L_11_14520001 chr3L_14520001 CanS-JC 1398 chr3L 14546804 14546816 chr3L 14546931 14546943 11 127 0.0 5.5 2.8 2.9 139 chr3L 14546804 intron CG9238 - chr3L 14546874 intron CG9238 - chr3L 14546943 intron CG9238 - chr3L_11_14545001 chr3L_14545001 CanS-JC 1399 chr3L 14565719 14565775 chr3L 14565836 14565892 23 117 2.0 0.5 1.2 10.5 173 chr3L 14565719 intergenic not near genes chr3L 14565806 intergenic not near genes chr3L 14565892 intergenic not near genes chr3L_23_14565001 chr3L_14565001 CanS-JC 1400 chr3L 14575461 14575501 chr3L 14575576 14575616 9 115 3.0 2.5 2.8 2.4 155 chr3L 14575461 intergenic not near genes chr3L 14575538 intergenic not near genes chr3L 14575616 intergenic not near genes chr3L_9_14575001 chr3L_14575001 CanS-JC 1401 chr3L 14627212 14627215 chr3L 14627320 14627328 5 111 4.5 5.5 5.0 0.8 116 chr3L 14627212 intron CG9628 + chr3L 14627270 intron CG9628 + chr3L 14627328 intron CG9628 + chr3L_5_14625001 chr3L_14625001 CanS-JC 1402 chr3L 14633760 14633817 chr3L 14633882 14633939 15 122 0.0 6.0 3.0 3.8 179 chr3L 14633760 intron dlp + chr3L 14633850 intron dlp + chr3L 14633939 intron dlp + chr3L_15_14630001 chr3L_14630001 CanS-JC 1403 chr3L 14702007 14702019 chr3L 14702112 14702124 5 105 0.0 3.5 1.8 1.8 117 chr3L 14702007 intron ome + chr3L 14702066 intron ome + chr3L 14702124 intron ome + chr3L_5_14700001 chr3L_14700001 CanS-JC 1404 chr3L 14721168 14721194 chr3L 14723037 14723063 Rt1c 11 1869 8.0 8.0 8.0 1.2 1895 chr3L 14721168 intron ome + chr3L 14722116 intron ome + chr3L 14723063 intron ome + chr3L_11_14720001 chr3L_14720001 CanS-JC 1405 chr3L 14839022 14839051 chr3L 14839137 14839166 4 114 2.5 1.5 2.0 1.3 144 chr3L 14839022 intron CG17839 + chr3L 14839094 intron CG17839 + chr3L 14839166 intron CG17839 + chr3L_4_14835001 chr3L_14835001 CanS-JC 1406 chr3L 14844238 14844280 chr3L 14844355 14844397 11 117 4.0 1.0 2.5 3.1 159 chr3L 14844238 intron CG17839 + chr3L 14844318 intron CG17839 + chr3L 14844397 intron CG17839 + chr3L_11_14840001 chr3L_14840001 CanS-JC 1407 chr3L 14922080 14922135 chr3L 14922214 14922269 11 134 2.5 3.0 2.8 2.9 189 chr3L 14922080 intron DCX-EMAP + chr3L 14922174 intron DCX-EMAP + chr3L 14922269 intron DCX-EMAP + chr3L_11_14920001 chr3L_14920001 CanS-JC 1408 chr3L 14954190 14954235 chr3L 14956033 14956078 transib2 10 1842 1.5 0.5 1.0 5.0 1888 chr3L 14954190 intergenic not near genes chr3L 14955134 intergenic not near genes chr3L 14956078 intergenic not near genes chr3L_10_14955001 chr3L_14955001 CanS-JC 1409 chr3L 14991248 14991295 chr3L 14991375 14991422 18 127 2.0 4.0 3.0 4.5 174 chr3L 14991248 3` UTR mnd + chr3L 14991335 3` UTR mnd + chr3L 14991422 3` UTR mnd + chr3L_18_14990001 chr3L_14990001 CanS-JC 1410 chr3L 15054601 15054643 chr3L 15054716 15054759 5 116 4.5 6.0 5.2 0.8 158 chr3L 15054601 intron Sytbeta - chr3L 15054680 intron Sytbeta - chr3L 15054759 intron Sytbeta - chr3L_5_15050001 chr3L_15050001 CanS-JC 1411 chr3L 15085028 15085079 chr3L 15086220 15086271 1360 16 1192 4.0 5.0 4.5 2.9 1243 chr3L 15085028 intron cp309 - chr3L 15085650 intron cp309 - chr3L 15086271 intron cp309 - chr3L_16_15085001 chr3L_15085001 CanS-JC 1412 chr3L 15094945 15094963 chr3L 15095067 15095085 6 122 3.5 4.0 3.8 1.2 140 chr3L 15094945 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095015 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095085 intergenic Aats-gly +,cp309 -,CG6945 - chr3L_6_15095001 chr3L_15095001 CanS-JC 1413 chr3L 15104109 15104139 chr3L 15104245 15104275 9 136 3.5 2.5 3.0 2.2 166 chr3L 15104109 intron CTPsyn + chr3L 15104192 intron CTPsyn + chr3L 15104275 intron CTPsyn + chr3L_9_15100001 chr3L_15100001 CanS-JC 1414 chr3L 15168057 15168107 chr3L 15168266 15168316 21 209 4.0 2.5 3.2 5.0 259 chr3L 15168057 intergenic not near genes chr3L 15168186 intergenic not near genes chr3L 15168316 intergenic not near genes chr3L_21_15165001 chr3L_15165001 CanS-JC 1415 chr3L 15193668 15193719 chr3L 15193863 15193914 16 195 0.5 3.0 1.8 5.7 246 chr3L 15193668 intergenic not near genes chr3L 15193791 intergenic not near genes chr3L 15193914 intergenic not near genes chr3L_16_15190001 chr3L_15190001 CanS-JC 1416 chr3L 15219720 15219773 chr3L 15219828 15219881 9 107 3.5 2.0 2.8 2.4 161 chr3L 15219720 intergenic not near genes chr3L 15219800 intergenic not near genes chr3L 15219881 intergenic not near genes chr3L_9_15215001 chr3L_15215001 CanS-JC 1417 chr3L 15257422 15257440 chr3L 15257661 15257679 6 239 5.5 2.5 4.0 1.2 257 chr3L 15257422 intergenic not near genes chr3L 15257550 intergenic not near genes chr3L 15257679 intergenic not near genes chr3L_6_15255001 chr3L_15255001 CanS-JC 1418 chr3L 15286502 15286554 chr3L 15286661 15286708 12 156 5.0 0.5 2.8 3.2 206 chr3L 15286502 intergenic not near genes chr3L 15286605 intergenic not near genes chr3L 15286708 intergenic not near genes chr3L_12_15285001 chr3L_15285001 CanS-JC 1419 chr3L 15295746 15295800 chr3L 15298615 15298669 gypsy5 10 2869 4.0 6.0 5.0 1.7 2923 chr3L 15295746 intergenic not near genes chr3L 15297208 intergenic not near genes chr3L 15298669 intergenic Best4 + chr3L_10_15295001 chr3L_15295001 CanS-JC 1420 chr3L 15322765 15322817 chr3L 15322898 15322950 12 133 5.5 3.0 4.2 2.3 185 chr3L 15322765 intergenic not near genes chr3L 15322858 intergenic not near genes chr3L 15322950 intergenic not near genes chr3L_12_15320001 chr3L_15320001 CanS-JC 1421 chr3L 15333120 15333147 chr3L 15333226 15333253 11 106 2.0 3.0 2.5 3.1 133 chr3L 15333120 intergenic CR43247 + chr3L 15333186 intergenic CR43247 + chr3L 15333253 intergenic CR43247 + chr3L_11_15330001 chr3L_15330001 CanS-JC 1422 chr3L 15348085 15348143 chr3L 15348269 15348327 13 184 3.0 2.5 2.8 3.4 242 chr3L 15348085 intergenic not near genes chr3L 15348206 intergenic not near genes chr3L 15348327 intergenic not near genes chr3L_13_15345001 chr3L_15345001 CanS-JC 1423 chr3L 15405993 15406021 chr3L 15406101 15406129 8 108 4.5 4.0 4.2 1.5 136 chr3L 15405993 intergenic not near genes chr3L 15406061 intergenic not near genes chr3L 15406129 intergenic not near genes chr3L_8_15405001 chr3L_15405001 CanS-JC 1424 chr3L 15423761 15423779 chr3L 15426631 15426649 opus 5 2870 5.0 2.5 3.8 1.0 2888 chr3L 15423761 intergenic not near genes chr3L 15425205 intergenic not near genes chr3L 15426649 intergenic not near genes chr3L_5_15425001 chr3L_15425001 CanS-JC 1425 chr3L 15444631 15444642 chr3L 15444751 15444762 8 120 10.0 7.0 8.5 0.8 131 chr3L 15444631 intergenic not near genes chr3L 15444696 intergenic not near genes chr3L 15444762 intergenic not near genes chr3L_8_15440001 chr3L_15440001 CanS-JC 1426 chr3L 15444643 15444685 chr3L 15444748 15444805 9 118 2.5 7.0 4.8 1.6 162 chr3L 15444643 intergenic not near genes chr3L 15444724 intergenic not near genes chr3L 15444805 intergenic not near genes chr3L_9_15440001 chr3L_15440001 CanS-JC 1427 chr3L 15449684 15449725 chr3L 15449854 15449895 15 170 2.5 3.5 3.0 3.8 211 chr3L 15449684 intergenic not near genes chr3L 15449790 intergenic not near genes chr3L 15449895 intergenic not near genes chr3L_15_15445001 chr3L_15445001 CanS-JC 1428 chr3L 15450316 15450322 chr3L 15450430 15450436 4 114 5.5 0.0 2.8 1.1 120 chr3L 15450316 intergenic not near genes chr3L 15450376 intergenic not near genes chr3L 15450436 intergenic not near genes chr3L_4_15450001 chr3L_15450001 CanS-JC 1429 chr3L 15466011 15466137 chr3L 15466119 15466259 10 118 0.0 0.0 0.0 10.0 248 chr3L 15466011 intergenic not near genes chr3L 15466135 intergenic not near genes chr3L 15466259 intergenic not near genes chr3L_10_15465001 chr3L_15465001 CanS-JC 1430 chr3L 15466492 15466547 chr3L 15466602 15466657 11 110 6.0 2.5 4.2 2.1 165 chr3L 15466492 intergenic not near genes chr3L 15466574 intergenic not near genes chr3L 15466657 intergenic not near genes chr3L_11_15465001 chr3L_15465001 CanS-JC 1431 chr3L 15474666 15474687 chr3L 15474831 15474852 7 165 2.0 3.5 2.8 1.8 186 chr3L 15474666 intergenic not near genes chr3L 15474759 intergenic not near genes chr3L 15474852 intergenic not near genes chr3L_7_15470001 chr3L_15470001 CanS-JC 1432 chr3L 15533126 15533150 chr3L 15533234 15533258 5 108 0.0 4.0 2.0 1.7 132 chr3L 15533126 intergenic not near genes chr3L 15533192 intergenic not near genes chr3L 15533258 intergenic not near genes chr3L_5_15530001 chr3L_15530001 CanS-JC 1433 chr3L 15541851 15541908 chr3L 15541975 15542032 13 124 4.5 2.5 3.5 2.9 181 chr3L 15541851 intron CrebA + chr3L 15541942 intron CrebA + chr3L 15542032 intron CrebA + chr3L_13_15540001 chr3L_15540001 CanS-JC 1434 chr3L 15598881 15598916 chr3L 15598988 15599013 9 106 2.5 4.5 3.5 2.0 132 chr3L 15598881 intron RhoGAP71E + chr3L 15598947 intron RhoGAP71E + chr3L 15599013 intron RhoGAP71E + chr3L_9_15595001 chr3L_15595001 CanS-JC 1435 chr3L 15601555 15601609 chr3L 15601689 15601743 16 132 13.0 12.0 12.5 1.2 188 chr3L 15601555 intron RhoGAP71E + chr3L 15601649 exon RhoGAP71E + chr3L 15601743 exon RhoGAP71E + chr3L_16_15600001 chr3L_15600001 CanS-JC 1436 chr3L 15633160 15633190 chr3L 15633266 15633296 5 106 3.5 0.0 1.8 1.8 136 chr3L 15633160 intron comm3 - chr3L 15633228 intron comm3 - chr3L 15633296 intron comm3 - chr3L_5_15630001 chr3L_15630001 CanS-JC 1437 chr3L 15641784 15641808 chr3L 15641895 15641919 6 111 0.0 6.0 3.0 1.5 135 chr3L 15641784 intron comm3 - chr3L 15641852 intron comm3 - chr3L 15641919 intron comm3 - chr3L_6_15640001 chr3L_15640001 CanS-JC 1438 chr3L 15707211 15707250 chr3L 15707648 15707687 19 435 0.5 5.0 2.8 5.0 476 chr3L 15707211 intergenic not near genes chr3L 15707449 intergenic not near genes chr3L 15707687 intergenic not near genes chr3L_19_15705001 chr3L_15705001 CanS-JC 1439 chr3L 15756855 15756883 chr3L 15756962 15756992 14 109 8.0 0.0 4.0 2.8 137 chr3L 15756855 intergenic not near genes chr3L 15756924 intergenic not near genes chr3L 15756992 intergenic not near genes chr3L_14_15755001 chr3L_15755001 CanS-JC 1440 chr3L 15763983 15764028 chr3L 15764132 15764177 16 149 3.5 2.5 3.0 4.0 194 chr3L 15763983 intergenic not near genes chr3L 15764080 intergenic not near genes chr3L 15764177 intergenic not near genes chr3L_16_15760001 chr3L_15760001 CanS-JC 1441 chr3L 15809142 15809195 chr3L 15809252 15809305 16 110 1.0 8.0 4.5 2.9 163 chr3L 15809142 intergenic CG6244 +,CG13445 + chr3L 15809224 intergenic CG13445 +,CG6244 + chr3L 15809305 intergenic CG13445 +,CG6244 + chr3L_16_15805001 chr3L_15805001 CanS-JC 1442 chr3L 15832234 15832281 chr3L 15832341 15832388 23 106 1.5 3.0 2.2 7.2 154 chr3L 15832234 intergenic CG12713 +,dbo + chr3L 15832311 intergenic CG12713 +,dbo + chr3L 15832388 intergenic CG12713 +,dbo + chr3L_23_15830001 chr3L_15830001 CanS-JC 1443 chr3L 15834986 15835009 chr3L 15835152 15835190 10 180 5.0 5.5 5.2 1.6 204 chr3L 15834986 intron CG18081 - chr3L 15835088 intron CG18081 - chr3L 15835190 intron CG18081 - chr3L_10_15835001 chr3L_15835001 CanS-JC 1444 chr3L 15883172 15883223 chr3L 15883491 15883542 15 319 5.0 4.5 4.8 2.6 370 chr3L 15883172 intron pHCl - chr3L 15883357 intron pHCl - chr3L 15883542 intron pHCl - chr3L_15_15880001 chr3L_15880001 CanS-JC 1445 chr3L 15899202 15899252 chr3L 15899792 15899845 jockey 15 592 2.0 3.0 2.5 4.3 643 chr3L 15899202 intergenic pHCl - chr3L 15899524 intergenic pHCl - chr3L 15899845 intergenic sff - chr3L_15_15895001 chr3L_15895001 CanS-JC 1446 chr3L 15929173 15929223 chr3L 15938346 15938393 roo 13 9171 3.0 4.0 3.5 2.9 9220 chr3L 15929173 intron Pka-C3 - chr3L 15933783 intron Pka-C3 - chr3L 15938393 intron Pka-C3 - chr3L_13_15930001 chr3L_15930001 CanS-JC 1447 chr3L 15946481 15946490 chr3L 15946593 15946602 6 112 10.0 0.0 5.0 1.0 121 chr3L 15946481 intron Pka-C3 - chr3L 15946542 intron Pka-C3 - chr3L 15946602 intron Pka-C3 - chr3L_6_15945001 chr3L_15945001 CanS-JC 1448 chr3L 15989211 15989223 chr3L 15989320 15989332 7 109 7.0 2.0 4.5 1.3 121 chr3L 15989211 intron Hip14 + chr3L 15989272 intron Hip14 + chr3L 15989332 intron Hip14 + chr3L_7_15985001 chr3L_15985001 CanS-JC 1449 chr3L 16047725 16047751 chr3L 16047828 16047854 10 103 0.0 0.0 0.0 10.0 129 chr3L 16047725 intron th - chr3L 16047790 intron th - chr3L 16047854 intron th - chr3L_10_16045001 chr3L_16045001 CanS-JC 1450 chr3L 16051176 16051230 chr3L 16051567 16051621 12 391 3.0 2.0 2.5 3.4 445 chr3L 16051176 intergenic th - chr3L 16051398 intergenic th - chr3L 16051621 intergenic Mbs + chr3L_12_16050001 chr3L_16050001 CanS-JC 1451 chr3L 16162590 16162625 chr3L 16162700 16162735 11 110 5.5 10.0 7.8 1.2 145 chr3L 16162590 intron CG5151 - chr3L 16162662 intron CG5151 - chr3L 16162735 intron CG5151 - chr3L_11_16160001 chr3L_16160001 CanS-JC 1452 chr3L 16182055 16182095 chr3L 16182201 16182241 15 146 0.0 7.5 3.8 3.1 186 chr3L 16182055 intergenic not near genes chr3L 16182148 intergenic not near genes chr3L 16182241 intergenic not near genes chr3L_15_16180001 chr3L_16180001 CanS-JC 1453 chr3L 16184083 16184129 chr3L 16188928 16188974 X-element 12 4844 2.5 5.0 3.8 2.5 4891 chr3L 16184083 intergenic not near genes chr3L 16186528 intergenic not near genes chr3L 16188974 intergenic not near genes chr3L_12_16185001 chr3L_16185001 CanS-JC 1454 chr3L 16293008 16293047 chr3L 16293269 16293308 13 261 4.5 3.5 4.0 2.6 300 chr3L 16293008 intergenic not near genes chr3L 16293158 intergenic not near genes chr3L 16293308 intergenic not near genes chr3L_13_16290001 chr3L_16290001 CanS-JC 1455 chr3L 16366747 16366798 chr3L 16366916 16366967 20 169 3.5 6.5 5.0 3.3 220 chr3L 16366747 exon Cpr72Ec - chr3L 16366857 exon Cpr72Ec - chr3L 16366967 exon Cpr72Ec - chr3L_20_16365001 chr3L_16365001 CanS-JC 1456 chr3L 16443822 16443879 chr3L 16446188 16446245 Doc 25 2365 5.0 1.0 3.0 6.2 2423 chr3L 16443822 intron,intron CG33158 +,dsx-c73A - chr3L 16445034 intron,intron CG33158 +,dsx-c73A - chr3L 16446245 intron,intron CG33158 +,dsx-c73A - chr3L_25_16445001 chr3L_16445001 CanS-JC 1457 chr3L 16457502 16457558 chr3L 16457624 16457679 7 121 3.5 3.5 3.5 1.6 177 chr3L 16457502 intron CG33158 + chr3L 16457590 intron CG33158 + chr3L 16457679 intron CG33158 + chr3L_7_16455001 chr3L_16455001 CanS-JC 1458 chr3L 16474904 16474961 chr3L 16475213 16475266 23 308 3.5 4.0 3.8 4.8 362 chr3L 16474904 intron,intron CG33158 +,aos - chr3L 16475085 intron,intron CG33158 +,aos - chr3L 16475266 intron,intron CG33158 +,aos - chr3L_23_16475001 chr3L_16475001 CanS-JC 1459 chr3L 16487431 16487484 chr3L 16487535 16487586 14 104 4.5 4.0 4.2 2.7 155 chr3L 16487431 intron CG33158 + chr3L 16487508 intron CG33158 + chr3L 16487586 intron CG33158 + chr3L_14_16485001 chr3L_16485001 CanS-JC 1460 chr3L 16493964 16494005 chr3L 16494507 16494547 jockey 4 542 3.5 5.5 4.5 0.7 583 chr3L 16493964 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494256 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494547 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_4_16490001 chr3L_16490001 CanS-JC 1461 chr3L 16503618 16503657 chr3L 16503721 16503760 5 103 6.0 4.0 5.0 0.8 142 chr3L 16503618 intron CG43373 - chr3L 16503689 intron CG43373 - chr3L 16503760 intron CG43373 - chr3L_5_16500001 chr3L_16500001 CanS-JC 1462 chr3L 16533539 16533580 chr3L 16533676 16533717 4 137 3.0 3.5 3.2 1.0 178 chr3L 16533539 intron CG43373 - chr3L 16533628 intron CG43373 - chr3L 16533717 intron CG43373 - chr3L_4_16530001 chr3L_16530001 CanS-JC 1463 chr3L 16540030 16540081 chr3L 16540144 16540195 13 114 5.5 5.5 5.5 2.0 165 chr3L 16540030 intron CG43373 - chr3L 16540112 intron CG43373 - chr3L 16540195 intron CG43373 - chr3L_13_16540001 chr3L_16540001 CanS-JC 1464 chr3L 16563221 16563231 chr3L 16563328 16563338 5 107 5.5 0.0 2.8 1.3 117 chr3L 16563221 intergenic Mipp1 - chr3L 16563280 intergenic Mipp1 - chr3L 16563338 intergenic Mipp1 - chr3L_5_16560001 chr3L_16560001 CanS-JC 1465 chr3L 16610658 16610713 chr3L 16610769 16610824 20 111 3.5 2.0 2.8 5.3 166 chr3L 16610658 intergenic Su(P) -,Prosbeta6 - chr3L 16610741 exon Su(P) - chr3L 16610824 exon Su(P) - chr3L_20_16610001 chr3L_16610001 CanS-JC 1466 chr3L 16616511 16616539 chr3L 16621865 16621893 297 7 5354 2.0 8.5 5.2 1.1 5382 chr3L 16616511 3` UTR Abl - chr3L 16619202 3` UTR Abl - chr3L 16621893 3` UTR Abl - chr3L_7_16615001 chr3L_16615001 CanS-JC 1467 chr3L 16632215 16632256 chr3L 16632413 16632476 8 212 5.0 3.0 4.0 1.6 261 chr3L 16632215 intron Abl - chr3L 16632346 intron Abl - chr3L 16632476 intron Abl - chr3L_8_16630001 chr3L_16630001 CanS-JC 1468 chr3L 16684002 16684043 chr3L 16689249 16689290 copia 6 5247 0.0 3.0 1.5 2.4 5288 chr3L 16684002 intron,intron Lasp -,CG43954 - chr3L 16686646 intron,intron Lasp -,CG43954 - chr3L 16689290 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_6_16685001 chr3L_16685001 CanS-JC 1469 chr3L 16714819 16714865 chr3L 16714929 16714973 8 110 3.5 4.0 3.8 1.7 154 chr3L 16714819 intron Dab + chr3L 16714896 intron Dab + chr3L 16714973 intron Dab + chr3L_8_16710001 chr3L_16710001 CanS-JC 1470 chr3L 16779633 16779688 chr3L 16779744 16779799 15 111 3.0 1.0 2.0 5.0 166 chr3L 16779633 5` UTR CG13025 - chr3L 16779716 5` UTR CG13025 - chr3L 16779799 intergenic CG13025 -,CG9705 + chr3L_15_16775001 chr3L_16775001 CanS-JC 1471 chr3L 16808017 16808073 chr3L 16808119 16808178 10 103 4.5 0.0 2.2 3.1 161 chr3L 16808017 intron nudC + chr3L 16808098 intron nudC + chr3L 16808178 intron nudC + chr3L_10_16805001 chr3L_16805001 CanS-JC 1472 chr3L 16818722 16818779 chr3L 16818824 16818881 20 102 3.5 5.5 4.5 3.6 159 chr3L 16818722 intron,intron nudC +,CG13024 - chr3L 16818802 intron,intron nudC +,CG13024 - chr3L 16818881 intron,intron nudC +,CG13024 - chr3L_20_16815001 chr3L_16815001 CanS-JC 1473 chr3L 16836290 16836335 chr3L 16836408 16836453 8 118 6.5 0.0 3.2 1.9 163 chr3L 16836290 intergenic not near genes chr3L 16836372 intergenic not near genes chr3L 16836453 intergenic not near genes chr3L_8_16835001 chr3L_16835001 CanS-JC 1474 chr3L 16845000 16845041 chr3L 16845139 16845180 11 139 3.0 4.5 3.8 2.3 180 chr3L 16845000 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845090 intergenic CG9669 -,CG9715 + chr3L 16845180 intergenic CG9669 -,CG9715 + chr3L_11_16845001 chr3L_16845001 CanS-JC 1475 chr3L 16869554 16869604 chr3L 16869663 16869713 17 109 3.5 2.0 2.8 4.5 159 chr3L 16869554 intron Lmpt + chr3L 16869634 intron Lmpt + chr3L 16869713 intron Lmpt + chr3L_17_16865001 chr3L_16865001 CanS-JC 1476 chr3L 16870838 16870897 chr3L 16870956 16871014 15 118 1.0 0.0 0.5 10.0 176 chr3L 16870838 intron Lmpt + chr3L 16870926 intron Lmpt + chr3L 16871014 intron Lmpt + chr3L_15_16870001 chr3L_16870001 CanS-JC 1477 chr3L 16886869 16886878 chr3L 16886971 16886980 4 102 5.0 0.0 2.5 1.1 111 chr3L 16886869 intron Lmpt + chr3L 16886924 intron Lmpt + chr3L 16886980 intron Lmpt + chr3L_4_16885001 chr3L_16885001 CanS-JC 1478 chr3L 16945719 16945756 chr3L 16954898 16954934 roo 9 9179 4.0 4.5 4.2 1.7 9215 chr3L 16945719 exon Obp73a + chr3L 16950326 intergenic not near genes chr3L 16954934 5` UTR Nc73EF + chr3L_9_16950001 chr3L_16950001 CanS-JC 1479 chr3L 17026768 17026797 chr3L 17026875 17026904 7 106 10.0 3.5 6.8 0.9 136 chr3L 17026768 exon Fit2 + chr3L 17026836 3` UTR Fit2 + chr3L 17026904 3` UTR Fit2 + chr3L_7_17025001 chr3L_17025001 CanS-JC 1480 chr3L 17026800 17026822 chr3L 17026870 17026929 8 102 7.0 3.0 5.0 1.3 129 chr3L 17026800 exon Fit2 + chr3L 17026864 3` UTR Fit2 + chr3L 17026929 3` UTR Fit2 + chr3L_8_17025001 chr3L_17025001 CanS-JC 1481 chr3L 17027148 17027168 chr3L 17027266 17027286 6 118 4.0 2.5 3.2 1.4 138 chr3L 17027148 intergenic Fit2 +,CG7730 + chr3L 17027217 intergenic Fit2 +,CG7730 + chr3L 17027286 intergenic Fit2 +,CG7730 + chr3L_6_17025001 chr3L_17025001 CanS-JC 1482 chr3L 17034914 17034957 chr3L 17035128 17035171 G2 13 214 1.0 4.0 2.5 3.7 257 chr3L 17034914 intergenic not near genes chr3L 17035042 intergenic not near genes chr3L 17035171 intergenic beg + chr3L_13_17035001 chr3L_17035001 CanS-JC 1483 chr3L 17084979 17085031 chr3L 17094154 17094205 roo 15 9175 6.0 6.5 6.2 2.1 9226 chr3L 17084979 intron Rbp6 - chr3L 17089592 intron Rbp6 - chr3L 17094205 intron Rbp6 - chr3L_15_17085001 chr3L_17085001 CanS-JC 1484 chr3L 17107336 17107365 chr3L 17107439 17107480 10 113 8.5 7.0 7.8 1.1 144 chr3L 17107336 intron Rbp6 - chr3L 17107408 intron Rbp6 - chr3L 17107480 intron Rbp6 - chr3L_10_17105001 chr3L_17105001 CanS-JC 1485 chr3L 17157610 17157624 chr3L 17157769 17157783 4 159 7.0 8.0 7.5 0.5 173 chr3L 17157610 intron Rbp6 - chr3L 17157696 intron Rbp6 - chr3L 17157783 intron Rbp6 - chr3L_4_17155001 chr3L_17155001 CanS-JC 1486 chr3L 17217235 17217283 chr3L 17217341 17217389 11 106 5.0 7.0 6.0 1.6 154 chr3L 17217235 intron Rbp6 - chr3L 17217312 intron Rbp6 - chr3L 17217389 intron Rbp6 - chr3L_11_17215001 chr3L_17215001 CanS-JC 1487 chr3L 17272218 17272266 chr3L 17272377 17272425 14 159 4.0 4.0 4.0 2.8 207 chr3L 17272218 intergenic not near genes chr3L 17272322 intergenic not near genes chr3L 17272425 intergenic not near genes chr3L_14_17270001 chr3L_17270001 CanS-JC 1488 chr3L 17310051 17310070 chr3L 17310166 17310185 4 115 0.0 3.0 1.5 1.6 134 chr3L 17310051 intergenic not near genes chr3L 17310118 intergenic not near genes chr3L 17310185 intergenic not near genes chr3L_4_17310001 chr3L_17310001 CanS-JC 1489 chr3L 17331061 17331087 chr3L 17331177 17331203 5 116 7.0 4.0 5.5 0.8 142 chr3L 17331061 intergenic not near genes chr3L 17331132 intergenic not near genes chr3L 17331203 intergenic not near genes chr3L_5_17330001 chr3L_17330001 CanS-JC 1490 chr3L 17344605 17344648 chr3L 17344714 17344757 11 109 5.5 0.0 2.8 2.9 152 chr3L 17344605 exon brv2 - chr3L 17344681 5` UTR brv2 - chr3L 17344757 intergenic brv2 -,Mip - chr3L_11_17340001 chr3L_17340001 CanS-JC 1491 chr3L 17495216 17495259 chr3L 17495357 17495400 15 141 2.5 7.0 4.8 2.6 184 chr3L 17495216 intron,exon Oatp74D +,edin + chr3L 17495308 intron Oatp74D + chr3L 17495400 intron Oatp74D + chr3L_15_17495001 chr3L_17495001 CanS-JC 1492 chr3L 17498076 17498137 chr3L 17498179 17498240 15 103 1.0 3.5 2.2 4.7 164 chr3L 17498076 intron Oatp74D + chr3L 17498158 intron Oatp74D + chr3L 17498240 intron Oatp74D + chr3L_15_17495001 chr3L_17495001 CanS-JC 1493 chr3L 17510719 17510757 chr3L 17510829 17510867 8 110 6.0 8.0 7.0 1.0 148 chr3L 17510719 exon Oatp74D + chr3L 17510793 intron Oatp74D + chr3L 17510867 intron Oatp74D + chr3L_8_17510001 chr3L_17510001 CanS-JC 1494 chr3L 17516961 17517001 chr3L 17524545 17524585 412 16 7583 5.0 2.0 3.5 3.6 7624 chr3L 17516961 intron CG7564 + chr3L 17520773 intron CG7564 + chr3L 17524585 3` UTR CG7564 + chr3L_16_17520001 chr3L_17520001 CanS-JC 1495 chr3L 17535794 17535834 chr3L 17535934 17535974 12 140 3.5 4.0 3.8 2.5 180 chr3L 17535794 intron Nedd4 + chr3L 17535884 intron Nedd4 + chr3L 17535974 intron Nedd4 + chr3L_12_17535001 chr3L_17535001 CanS-JC 1496 chr3L 17580559 17580591 chr3L 17580761 17580793 11 202 6.5 0.0 3.2 2.6 234 chr3L 17580559 intron Eip74EF - chr3L 17580676 intron Eip74EF - chr3L 17580793 intron Eip74EF - chr3L_11_17580001 chr3L_17580001 CanS-JC 1497 chr3L 17659697 17659755 chr3L 17659800 17659858 11 103 3.5 1.5 2.5 3.1 161 chr3L 17659697 intergenic Crtc - chr3L 17659778 intergenic Crtc - chr3L 17659858 3` UTR Crtc - chr3L_11_17655001 chr3L_17655001 CanS-JC 1498 chr3L 17730838 17730873 chr3L 17738194 17738229 mdg1 5 7356 4.0 7.5 5.8 0.7 7391 chr3L 17730838 intron Ccn + chr3L 17734534 intron Ccn + chr3L 17738229 intron Ccn + chr3L_5_17730001 chr3L_17730001 CanS-JC 1499 chr3L 17753328 17753352 chr3L 17753440 17753464 8 112 3.5 8.0 5.8 1.2 136 chr3L 17753328 intron Adgf-A - chr3L 17753396 intron Adgf-A - chr3L 17753464 intron Adgf-A - chr3L_8_17750001 chr3L_17750001 CanS-JC 1500 chr3L 17776045 17776101 chr3L 17776156 17776212 13 111 4.5 4.5 4.5 2.4 167 chr3L 17776045 intergenic not near genes chr3L 17776128 intergenic not near genes chr3L 17776212 intergenic not near genes chr3L_13_17775001 chr3L_17775001 CanS-JC 1501 chr3L 17790577 17790635 chr3L 17790868 17790926 12 291 5.0 1.0 3.0 3.0 349 chr3L 17790577 intergenic not near genes chr3L 17790752 intergenic CG42815 - chr3L 17790926 intergenic CG42815 - chr3L_12_17790001 chr3L_17790001 CanS-JC 1502 chr3L 17799789 17799841 chr3L 17801602 17801654 S-element 15 1813 8.5 5.5 7.0 1.9 1865 chr3L 17799789 intron NUCB1 - chr3L 17800722 intron NUCB1 - chr3L 17801654 intron NUCB1 - chr3L_15_17800001 chr3L_17800001 CanS-JC 1503 chr3L 17834298 17834354 chr3L 17834488 17834544 13 190 0.5 4.0 2.2 4.1 246 chr3L 17834298 intron Grd + chr3L 17834421 intron Grd + chr3L 17834544 intron Grd + chr3L_13_17830001 chr3L_17830001 CanS-JC 1504 chr3L 17837604 17837648 chr3L 17837717 17837762 15 113 3.5 5.5 4.5 2.7 158 chr3L 17837604 exon Grd + chr3L 17837683 intron Grd + chr3L 17837762 exon Grd + chr3L_15_17835001 chr3L_17835001 CanS-JC 1505 chr3L 17884685 17884708 chr3L 17884811 17884834 7 126 0.5 2.0 1.2 3.2 149 chr3L 17884685 intergenic CG5506 - chr3L 17884760 intergenic CG5506 - chr3L 17884834 intergenic CG5506 - chr3L_7_17880001 chr3L_17880001 CanS-JC 1506 chr3L 17968113 17968164 chr3L 17968220 17968271 12 107 4.5 4.0 4.2 2.3 158 chr3L 17968113 intron Eip75B - chr3L 17968192 intron Eip75B - chr3L 17968271 intron Eip75B - chr3L_12_17965001 chr3L_17965001 CanS-JC 1507 chr3L 17991579 17991589 chr3L 17991683 17991693 5 104 6.5 10.0 8.2 0.5 114 chr3L 17991579 intron Eip75B - chr3L 17991636 intron Eip75B - chr3L 17991693 intron Eip75B - chr3L_5_17990001 chr3L_17990001 CanS-JC 1508 chr3L 18000646 18000697 chr3L 18000749 18000800 16 102 3.0 4.5 3.8 3.3 154 chr3L 18000646 intron Eip75B - chr3L 18000723 intron Eip75B - chr3L 18000800 intron Eip75B - chr3L_16_18000001 chr3L_18000001 CanS-JC 1509 chr3L 18006201 18006229 chr3L 18006351 18006379 6 150 3.5 5.5 4.5 1.1 178 chr3L 18006201 intron Eip75B - chr3L 18006290 intron Eip75B - chr3L 18006379 intron Eip75B - chr3L_6_18005001 chr3L_18005001 CanS-JC 1510 chr3L 18013944 18013956 chr3L 18014059 18014071 4 115 5.5 0.0 2.8 1.1 127 chr3L 18013944 intron Eip75B - chr3L 18014008 intron Eip75B - chr3L 18014071 intron Eip75B - chr3L_4_18010001 chr3L_18010001 CanS-JC 1511 chr3L 18029936 18029962 chr3L 18030039 18030065 4 103 4.0 0.0 2.0 1.3 129 chr3L 18029936 intron Eip75B - chr3L 18030000 intron Eip75B - chr3L 18030065 intron Eip75B - chr3L_4_18030001 chr3L_18030001 CanS-JC 1512 chr3L 18047682 18047729 chr3L 18056765 18056812 roo 11 9083 4.5 5.0 4.8 1.9 9130 chr3L 18047682 intron Eip75B - chr3L 18052247 intron Eip75B - chr3L 18056812 intron Eip75B - chr3L_11_18050001 chr3L_18050001 CanS-JC 1513 chr3L 18118185 18118240 chr3L 18118289 18118344 17 104 4.0 4.5 4.2 3.3 159 chr3L 18118185 3` UTR,intron CG32195 +,CG7341 + chr3L 18118264 3` UTR,intron CG32195 +,CG7341 + chr3L 18118344 3` UTR,intron CG32195 +,CG7341 + chr3L_17_18115001 chr3L_18115001 CanS-JC 1514 chr3L 18152713 18152752 chr3L 18152850 18152888 4 136 2.5 3.0 2.8 1.1 175 chr3L 18152713 intron CG7330 + chr3L 18152800 intron CG7330 + chr3L 18152888 intron CG7330 + chr3L_4_18150001 chr3L_18150001 CanS-JC 1515 chr3L 18172665 18172699 chr3L 18172767 18172801 6 102 7.5 2.0 4.8 1.0 136 chr3L 18172665 intron W - chr3L 18172733 intron W - chr3L 18172801 intron W - chr3L_6_18170001 chr3L_18170001 CanS-JC 1516 chr3L 18195006 18195041 chr3L 18195116 18195151 9 110 15.5 14.5 15.0 0.6 145 chr3L 18195006 intergenic not near genes chr3L 18195078 intergenic not near genes chr3L 18195151 intergenic not near genes chr3L_9_18195001 chr3L_18195001 CanS-JC 1517 chr3L 18210716 18210748 chr3L 18210818 18210859 6 110 1.5 0.0 0.8 3.3 143 chr3L 18210716 intergenic not near genes chr3L 18210788 intergenic not near genes chr3L 18210859 intergenic not near genes chr3L_6_18210001 chr3L_18210001 CanS-JC 1518 chr3L 18220216 18220228 chr3L 18220636 18220649 5 421 3.5 7.5 5.5 0.8 433 chr3L 18220216 intergenic not near genes chr3L 18220432 intergenic not near genes chr3L 18220649 intergenic not near genes chr3L_5_18220001 chr3L_18220001 CanS-JC 1519 chr3L 18223139 18223188 chr3L 18223248 18223309 5 116 2.0 0.0 1.0 2.5 170 chr3L 18223139 intergenic not near genes chr3L 18223224 intergenic not near genes chr3L 18223309 intergenic not near genes chr3L_5_18220001 chr3L_18220001 CanS-JC 1520 chr3L 18258834 18258879 chr3L 18258985 18259031 11 152 4.5 4.0 4.2 2.1 197 chr3L 18258834 intergenic not near genes chr3L 18258932 intergenic not near genes chr3L 18259031 intergenic not near genes chr3L_11_18255001 chr3L_18255001 CanS-JC 1521 chr3L 18262445 18262466 chr3L 18262554 18262575 5 109 5.0 3.5 4.2 1.0 130 chr3L 18262445 intergenic not near genes chr3L 18262510 intergenic not near genes chr3L 18262575 intergenic not near genes chr3L_5_18260001 chr3L_18260001 CanS-JC 1522 chr3L 18301328 18301380 chr3L 18301443 18301495 4 115 0.0 4.0 2.0 1.3 167 chr3L 18301328 intergenic CG13700 - chr3L 18301412 intergenic CG13700 - chr3L 18301495 intergenic CG13700 - chr3L_4_18300001 chr3L_18300001 CanS-JC 1523 chr3L 18321055 18321097 chr3L 18321168 18321209 10 110 4.5 3.5 4.0 2.0 154 chr3L 18321055 intergenic not near genes chr3L 18321132 intergenic not near genes chr3L 18321209 intergenic not near genes chr3L_10_18320001 chr3L_18320001 CanS-JC 1524 chr3L 18326139 18326168 chr3L 18326417 18326446 6 278 8.0 4.0 6.0 0.9 307 chr3L 18326139 intergenic not near genes chr3L 18326292 intergenic not near genes chr3L 18326446 intergenic not near genes chr3L_6_18325001 chr3L_18325001 CanS-JC 1525 chr3L 18347816 18347844 chr3L 18347927 18347957 7 113 0.0 5.0 2.5 2.0 141 chr3L 18347816 intergenic not near genes chr3L 18347886 intergenic not near genes chr3L 18347957 intergenic not near genes chr3L_7_18345001 chr3L_18345001 CanS-JC 1526 chr3L 18406107 18406126 chr3L 18406209 18406228 5 102 6.5 5.0 5.8 0.7 121 chr3L 18406107 intergenic not near genes chr3L 18406168 intergenic not near genes chr3L 18406228 intergenic not near genes chr3L_5_18405001 chr3L_18405001 CanS-JC 1527 chr3L 18408712 18408756 chr3L 18408824 18408846 14 110 1.5 1.5 1.5 5.6 134 chr3L 18408712 intergenic not near genes chr3L 18408779 intergenic not near genes chr3L 18408846 intergenic not near genes chr3L_14_18405001 chr3L_18405001 CanS-JC 1528 chr3L 18436039 18436088 chr3L 18436163 18436212 9 124 5.5 3.0 4.2 1.7 173 chr3L 18436039 intergenic not near genes chr3L 18436126 intergenic not near genes chr3L 18436212 intergenic not near genes chr3L_9_18435001 chr3L_18435001 CanS-JC 1529 chr3L 18456247 18456297 chr3L 18456361 18456411 17 114 4.5 1.5 3.0 4.2 164 chr3L 18456247 intergenic CR44670 - chr3L 18456329 intergenic CR44670 - chr3L 18456411 3` UTR CR44670 - chr3L_17_18455001 chr3L_18455001 CanS-JC 1530 chr3L 18506113 18506158 chr3L 18509602 18509647 F-element 9 3489 5.5 4.5 5.0 1.5 3534 chr3L 18506113 intergenic not near genes chr3L 18507880 intergenic not near genes chr3L 18509647 intergenic not near genes chr3L_9_18505001 chr3L_18505001 CanS-JC 1531 chr3L 18514890 18514917 chr3L 18520107 18520134 BS 14 5216 11.0 4.0 7.5 1.6 5244 chr3L 18514890 intergenic not near genes chr3L 18517512 intergenic not near genes chr3L 18520134 intergenic not near genes chr3L_14_18515001 chr3L_18515001 CanS-JC 1532 chr3L 18514918 18514929 chr3L 18520104 18520146 BS 6 5212 8.0 4.0 6.0 0.9 5228 chr3L 18514918 intergenic not near genes chr3L 18517532 intergenic not near genes chr3L 18520146 intergenic not near genes chr3L_6_18515001 chr3L_18515001 CanS-JC 1533 chr3L 18528604 18528657 chr3L 18537791 18537844 roo 13 9187 3.0 0.5 1.8 4.6 9240 chr3L 18528604 intergenic not near genes chr3L 18533224 intergenic not near genes chr3L 18537844 intergenic not near genes chr3L_13_18530001 chr3L_18530001 CanS-JC 1534 chr3L 18562072 18562119 chr3L 18562188 18562235 7 116 3.5 4.0 3.8 1.5 163 chr3L 18562072 intron AstC-R1 + chr3L 18562154 intron AstC-R1 + chr3L 18562235 intron AstC-R1 + chr3L_7_18560001 chr3L_18560001 CanS-JC 1535 chr3L 18585525 18585555 chr3L 18585627 18585657 13 100 5.5 4.5 5.0 2.2 132 chr3L 18585525 intergenic not near genes chr3L 18585591 intergenic not near genes chr3L 18585657 intergenic not near genes chr3L_13_18585001 chr3L_18585001 CanS-JC 1536 chr3L 18593929 18593981 chr3L 18595935 18595990 Doc 9 2007 1.5 2.5 2.0 3.0 2061 chr3L 18593929 intergenic term - chr3L 18594960 intergenic not near genes chr3L 18595990 intergenic CR45389 + chr3L_9_18590001 chr3L_18590001 CanS-JC 1537 chr3L 18721746 18721799 chr3L 18721863 18721916 15 116 6.0 4.0 5.0 2.5 170 chr3L 18721746 intergenic CG12477 - chr3L 18721831 intergenic CG12477 - chr3L 18721916 3` UTR CG12477 - chr3L_15_18720001 chr3L_18720001 CanS-JC 1538 chr3L 18772389 18772436 chr3L 18781090 18781143 roo 9 8704 5.5 5.0 5.2 1.5 8754 chr3L 18772389 intron ftz-f1 - chr3L 18776766 intron ftz-f1 - chr3L 18781143 intron ftz-f1 - chr3L_9_18775001 chr3L_18775001 CanS-JC 1539 chr3L 18784367 18784402 chr3L 18784482 18784517 12 115 3.5 1.5 2.5 3.4 150 chr3L 18784367 intron ftz-f1 - chr3L 18784442 intron ftz-f1 - chr3L 18784517 intron ftz-f1 - chr3L_12_18780001 chr3L_18780001 CanS-JC 1540 chr3L 18797285 18797338 chr3L 18797395 18797448 13 110 2.0 4.0 3.0 3.2 163 chr3L 18797285 intron ftz-f1 - chr3L 18797366 intron ftz-f1 - chr3L 18797448 intron ftz-f1 - chr3L_13_18795001 chr3L_18795001 CanS-JC 1541 chr3L 18924454 18924498 chr3L 18924556 18924600 6 102 3.0 4.0 3.5 1.3 146 chr3L 18924454 intron CG32204 - chr3L 18924527 intron CG32204 - chr3L 18924600 intron CG32204 - chr3L_6_18920001 chr3L_18920001 CanS-JC 1542 chr3L 18933067 18933115 chr3L 18933178 18933226 15 109 5.5 6.5 6.0 2.1 159 chr3L 18933067 intron CG32204 - chr3L 18933146 intron CG32204 - chr3L 18933226 intron CG32204 - chr3L_15_18930001 chr3L_18930001 CanS-JC 1543 chr3L 18950995 18951048 chr3L 18951098 18951151 17 103 4.5 3.5 4.0 3.4 156 chr3L 18950995 intron CG6836 + chr3L 18951073 intron CG6836 + chr3L 18951151 intron CG6836 + chr3L_17_18950001 chr3L_18950001 CanS-JC 1544 chr3L 18959984 18959995 chr3L 18960091 18960102 5 107 4.5 6.0 5.2 0.8 118 chr3L 18959984 intergenic not near genes chr3L 18960043 intergenic not near genes chr3L 18960102 intergenic not near genes chr3L_5_18960001 chr3L_18960001 CanS-JC 1545 chr3L 18969527 18969568 chr3L 18969629 18969670 14 102 6.0 5.0 5.5 2.2 143 chr3L 18969527 intergenic not near genes chr3L 18969598 intergenic not near genes chr3L 18969670 intergenic not near genes chr3L_14_18965001 chr3L_18965001 CanS-JC 1546 chr3L 19008830 19008871 chr3L 19009187 19009200 jockey 11 360 1.0 5.0 3.0 2.8 370 chr3L 19008830 intron nkd - chr3L 19009015 intron nkd - chr3L 19009200 intron nkd - chr3L_11_19005001 chr3L_19005001 CanS-JC 1547 chr3L 19025917 19025962 chr3L 19026027 19026069 9 109 4.0 0.0 2.0 3.0 152 chr3L 19025917 intron nkd - chr3L 19025993 intron nkd - chr3L 19026069 intron nkd - chr3L_9_19025001 chr3L_19025001 CanS-JC 1548 chr3L 19111378 19111407 chr3L 19111489 19111518 12 111 10.0 5.5 7.8 1.4 140 chr3L 19111378 intron CG14082 - chr3L 19111448 intron CG14082 - chr3L 19111518 intron CG14082 - chr3L_12_19110001 chr3L_19110001 CanS-JC 1549 chr3L 19115622 19115667 chr3L 19115826 19115871 BS 25 203 6.5 4.5 5.5 3.8 249 chr3L 19115622 intron CG14082 - chr3L 19115746 intron CG14082 - chr3L 19115871 intron CG14082 - chr3L_25_19115001 chr3L_19115001 CanS-JC 1550 chr3L 19117019 19117076 chr3L 19124492 19124549 mdg1 14 7473 3.5 5.0 4.2 2.7 7530 chr3L 19117019 intron CG14082 - chr3L 19120784 intron CG14082 - chr3L 19124549 intron CG14082 - chr3L_14_19120001 chr3L_19120001 CanS-JC 1551 chr3L 19138532 19138582 chr3L 19138639 19138689 15 105 3.5 2.0 2.8 3.9 157 chr3L 19138532 intron CG14082 - chr3L 19138610 intron CG14082 - chr3L 19138689 intron CG14082 - chr3L_15_19135001 chr3L_19135001 CanS-JC 1552 chr3L 19182362 19182376 chr3L 19182469 19182483 6 107 8.0 8.0 8.0 0.7 121 chr3L 19182362 intron fz2 - chr3L 19182422 intron fz2 - chr3L 19182483 intron fz2 - chr3L_6_19180001 chr3L_19180001 CanS-JC 1553 chr3L 19182381 19182413 chr3L 19182465 19182520 6 103 4.0 8.0 6.0 0.9 139 chr3L 19182381 intron fz2 - chr3L 19182450 intron fz2 - chr3L 19182520 intron fz2 - chr3L_6_19180001 chr3L_19180001 CanS-JC 1554 chr3L 19186224 19186281 chr3L 19186366 19186423 18 142 3.0 6.5 4.8 3.1 199 chr3L 19186224 intron fz2 - chr3L 19186324 intron fz2 - chr3L 19186423 intron fz2 - chr3L_18_19185001 chr3L_19185001 CanS-JC 1555 chr3L 19208037 19208090 chr3L 19209437 19209489 Doc 24 1399 5.5 3.5 4.5 4.4 1452 chr3L 19208037 intron fz2 - chr3L 19208763 intron fz2 - chr3L 19209489 intron fz2 - chr3L_24_19205001 chr3L_19205001 CanS-JC 1556 chr3L 19210124 19210140 chr3L 19210246 19210262 5 122 1.0 8.5 4.8 0.9 138 chr3L 19210124 intron fz2 - chr3L 19210193 intron fz2 - chr3L 19210262 intron fz2 - chr3L_5_19210001 chr3L_19210001 CanS-JC 1557 chr3L 19220636 19220637 chr3L 22908066 22908067 10 3687430 21.0 21.0 21.0 0.5 3687431 chr3L 19220636 intron fz2 - chr3L 21064352 intron siz + chr3L 22908067 intergenic not near genes chr3L_10_21060001 chr3L_21060001 CanS-JC 1558 chr3L 19282238 19282293 chr3L 19282360 19282415 23 122 6.0 7.0 6.5 3.1 177 chr3L 19282238 3` UTR Gbs-76A - chr3L 19282326 3` UTR Gbs-76A - chr3L 19282415 3` UTR Gbs-76A - chr3L_23_19280001 chr3L_19280001 CanS-JC 1559 chr3L 19398915 19398930 chr3L 19403658 19403673 F-element 5 4743 3.0 2.0 2.5 1.4 4758 chr3L 19398915 intron CG32206 - chr3L 19401294 intron CG32206 - chr3L 19403673 intron CG32206 - chr3L_5_19400001 chr3L_19400001 CanS-JC 1560 chr3L 19404956 19405005 chr3L 19405059 19405108 17 103 5.0 6.0 5.5 2.6 152 chr3L 19404956 intron CG32206 - chr3L 19405032 intron CG32206 - chr3L 19405108 intron CG32206 - chr3L_17_19405001 chr3L_19405001 CanS-JC 1561 chr3L 19430401 19430427 chr3L 19430505 19430531 11 104 3.0 7.5 5.2 1.8 130 chr3L 19430401 intergenic not near genes chr3L 19430466 intergenic not near genes chr3L 19430531 intergenic not near genes chr3L_11_19430001 chr3L_19430001 CanS-JC 1562 chr3L 19439151 19439188 chr3L 19439256 19439293 9 105 7.5 4.0 5.8 1.3 142 chr3L 19439151 intergenic not near genes chr3L 19439222 intergenic not near genes chr3L 19439293 intergenic not near genes chr3L_9_19435001 chr3L_19435001 CanS-JC 1563 chr3L 19488108 19488142 chr3L 19488222 19488256 12 113 1.5 6.5 4.0 2.4 148 chr3L 19488108 3` UTR,exon pncr009:3L -,CG32212 + chr3L 19488182 3` UTR,exon pncr009:3L -,CG32212 + chr3L 19488256 3` UTR,exon pncr009:3L -,CG32212 + chr3L_12_19485001 chr3L_19485001 CanS-JC 1564 chr3L 19488481 19488499 chr3L 19488589 19488607 6 108 9.0 4.5 6.8 0.8 126 chr3L 19488481 intergenic pncr009:3L -,CG32212 + chr3L 19488544 intergenic pncr009:3L -,CG32212 + chr3L 19488607 intergenic pncr009:3L -,CG32212 + chr3L_6_19485001 chr3L_19485001 CanS-JC 1565 chr3L 19527929 19527950 chr3L 19528010 19528055 9 102 10.0 7.0 8.5 0.9 126 chr3L 19527929 intergenic not near genes chr3L 19527992 intergenic not near genes chr3L 19528055 intergenic not near genes chr3L_9_19525001 chr3L_19525001 CanS-JC 1566 chr3L 19544210 19544254 chr3L 19544312 19544356 10 102 5.5 5.5 5.5 1.5 146 chr3L 19544210 intergenic CG9279 -,l(3)76BDr - chr3L 19544283 intergenic l(3)76BDr -,CG9279 - chr3L 19544356 3` UTR l(3)76BDr - chr3L_10_19540001 chr3L_19540001 CanS-JC 1567 chr3L 19660475 19660523 chr3L 19660616 19660664 16 141 3.0 4.0 3.5 3.6 189 chr3L 19660475 intron tey - chr3L 19660570 intron tey - chr3L 19660664 intron tey - chr3L_16_19660001 chr3L_19660001 CanS-JC 1568 chr3L 19820284 19820313 chr3L 19827859 19827888 412 15 7575 4.5 3.5 4.0 3.0 7604 chr3L 19820284 intron Deaf1 + chr3L 19824086 intron Deaf1 + chr3L 19827888 intron Deaf1 + chr3L_15_19820001 chr3L_19820001 CanS-JC 1569 chr3L 19846580 19846631 chr3L 19846704 19846755 8 124 3.0 4.5 3.8 1.7 175 chr3L 19846580 intron Papss + chr3L 19846668 intron Papss + chr3L 19846755 intron Papss + chr3L_8_19845001 chr3L_19845001 CanS-JC 1570 chr3L 19848485 19848525 chr3L 19857701 19857721 roo 12 9214 5.0 5.5 5.2 1.9 9236 chr3L 19848485 intron Papss + chr3L 19853103 intron Papss + chr3L 19857721 intron Papss + chr3L_12_19850001 chr3L_19850001 CanS-JC 1571 chr3L 19861799 19861852 chr3L 19863613 19863660 S-element 14 1814 1.5 4.5 3.0 3.5 1861 chr3L 19861799 5` UTR CR45433 + chr3L 19862730 intergenic not near genes chr3L 19863660 intergenic not near genes chr3L_14_19860001 chr3L_19860001 CanS-JC 1572 chr3L 19981183 19981236 chr3L 19981289 19981342 11 106 3.0 3.0 3.0 2.8 159 chr3L 19981183 intergenic not near genes chr3L 19981262 intergenic CG17732 + chr3L 19981342 intergenic CG17732 + chr3L_11_19980001 chr3L_19980001 CanS-JC 1573 chr3L 19986365 19986415 chr3L 19986471 19986519 14 106 5.0 4.5 4.8 2.4 154 chr3L 19986365 exon schuy + chr3L 19986442 exon schuy + chr3L 19986519 exon schuy + chr3L_14_19985001 chr3L_19985001 CanS-JC 1574 chr3L 20086765 20086799 chr3L 20086869 20086903 7 104 6.0 0.0 3.0 1.8 138 chr3L 20086765 intron sNPF-R - chr3L 20086834 intron sNPF-R - chr3L 20086903 intron sNPF-R - chr3L_7_20085001 chr3L_20085001 CanS-JC 1575 chr3L 20088110 20088147 chr3L 20088214 20088251 10 104 9.0 7.0 8.0 1.1 141 chr3L 20088110 intron sNPF-R - chr3L 20088180 intron sNPF-R - chr3L 20088251 intron sNPF-R - chr3L_10_20085001 chr3L_20085001 CanS-JC 1576 chr3L 20113643 20113681 chr3L 20122926 20122964 roo 6 9283 2.5 4.5 3.5 1.3 9321 chr3L 20113643 intergenic not near genes chr3L 20118304 intergenic not near genes chr3L 20122964 intergenic not near genes chr3L_6_20115001 chr3L_20115001 CanS-JC 1577 chr3L 20157945 20157997 chr3L 20158069 20158119 12 124 4.0 3.0 3.5 2.7 174 chr3L 20157945 intron CG42674 - chr3L 20158032 intron CG42674 - chr3L 20158119 intron CG42674 - chr3L_12_20155001 chr3L_20155001 CanS-JC 1578 chr3L 20386919 20386971 chr3L 20387047 20387099 15 128 7.5 3.0 5.2 2.4 180 chr3L 20386919 intron fbl + chr3L 20387009 intron fbl + chr3L 20387099 intron fbl + chr3L_15_20385001 chr3L_20385001 CanS-JC 1579 chr3L 20394502 20394543 chr3L 20394612 20394653 16 110 4.0 5.0 4.5 2.9 151 chr3L 20394502 intergenic not near genes chr3L 20394578 intergenic not near genes chr3L 20394653 intergenic not near genes chr3L_16_20390001 chr3L_20390001 CanS-JC 1580 chr3L 20402171 20402226 chr3L 20402278 20402333 11 107 2.0 2.0 2.0 3.7 162 chr3L 20402171 intergenic not near genes chr3L 20402252 intergenic not near genes chr3L 20402333 intergenic not near genes chr3L_11_20400001 chr3L_20400001 CanS-JC 1581 chr3L 20403549 20403604 chr3L 20403670 20403725 17 121 3.5 4.5 4.0 3.4 176 chr3L 20403549 intergenic not near genes chr3L 20403637 intergenic not near genes chr3L 20403725 intergenic not near genes chr3L_17_20400001 chr3L_20400001 CanS-JC 1582 chr3L 20451247 20451301 chr3L 20451514 20451568 19 267 3.5 1.5 2.5 5.4 321 chr3L 20451247 exon CG5199 - chr3L 20451408 intron CG5199 - chr3L 20451568 intron CG5199 - chr3L_19_20450001 chr3L_20450001 CanS-JC 1583 chr3L 20462563 20462585 chr3L 20462670 20462692 9 107 7.5 0.0 3.8 1.9 129 chr3L 20462563 intron atk - chr3L 20462628 intron atk - chr3L 20462692 intron atk - chr3L_9_20460001 chr3L_20460001 CanS-JC 1584 chr3L 20476728 20476780 chr3L 20484353 20484405 springer 12 7625 5.5 7.5 6.5 1.6 7677 chr3L 20476728 3` UTR isoQC + chr3L 20480566 intergenic not near genes chr3L 20484405 3` UTR ZnT77C - chr3L_12_20480001 chr3L_20480001 CanS-JC 1585 chr3L 20590043 20590094 chr3L 20590608 20590659 412 17 565 3.0 3.0 3.0 4.2 616 chr3L 20590043 intergenic not near genes chr3L 20590351 intergenic not near genes chr3L 20590659 intergenic not near genes chr3L_17_20590001 chr3L_20590001 CanS-JC 1586 chr3L 20710742 20710792 chr3L 20710845 20710895 10 103 1.0 3.5 2.2 3.1 153 chr3L 20710742 intergenic not near genes chr3L 20710818 intergenic not near genes chr3L 20710895 intergenic not near genes chr3L_10_20710001 chr3L_20710001 CanS-JC 1587 chr3L 20723283 20723321 chr3L 20723393 20723431 14 110 7.5 0.0 3.8 2.9 148 chr3L 20723283 intergenic not near genes chr3L 20723357 intergenic not near genes chr3L 20723431 intergenic not near genes chr3L_14_20720001 chr3L_20720001 CanS-JC 1588 chr3L 20795282 20795309 chr3L 20795393 20795420 10 111 7.0 4.5 5.8 1.5 138 chr3L 20795282 3` UTR CR43705 - chr3L 20795351 3` UTR CR43705 - chr3L 20795420 intron CR43705 - chr3L_10_20795001 chr3L_20795001 CanS-JC 1589 chr3L 20795311 20795336 chr3L 20795389 20795447 12 107 4.5 3.5 4.0 2.4 136 chr3L 20795311 3` UTR CR43705 - chr3L 20795379 intron CR43705 - chr3L 20795447 intron CR43705 - chr3L_12_20795001 chr3L_20795001 CanS-JC 1590 chr3L 20821274 20821308 chr3L 20824769 20824803 NOF 5 3495 2.5 12.0 7.2 0.6 3529 chr3L 20821274 intron Pka-R1 + chr3L 20823038 intron Pka-R1 + chr3L 20824803 intron Pka-R1 + chr3L_5_20820001 chr3L_20820001 CanS-JC 1591 chr3L 20858045 20858096 chr3L 20858170 20858221 9 125 2.5 4.0 3.2 2.1 176 chr3L 20858045 intron CG32432 - chr3L 20858133 intron CG32432 - chr3L 20858221 intron CG32432 - chr3L_9_20855001 chr3L_20855001 CanS-JC 1592 chr3L 20902671 20902715 chr3L 20902779 20902822 11 108 3.5 4.5 4.0 2.2 151 chr3L 20902671 intergenic CR45383 + chr3L 20902746 intergenic CR45383 + chr3L 20902822 intergenic CR45383 + chr3L_11_20900001 chr3L_20900001 CanS-JC 1593 chr3L 20917081 20917112 chr3L 20917184 20917215 12 103 4.0 4.5 4.2 2.3 134 chr3L 20917081 intergenic not near genes chr3L 20917148 intergenic not near genes chr3L 20917215 intergenic not near genes chr3L_12_20915001 chr3L_20915001 CanS-JC 1594 chr3L 20919365 20919412 chr3L 20921273 20921314 12 1903 35.5 30.5 33.0 0.4 1949 chr3L 20919365 intergenic not near genes chr3L 20920340 intergenic CR45734 + chr3L 20921314 3` UTR CR43929 - chr3L_12_20920001 chr3L_20920001 CanS-JC 1595 chr3L 21014888 21014947 chr3L 21023395 21023454 Tirant 25 8507 2.5 5.5 4.0 5.0 8566 chr3L 21014888 intron skd - chr3L 21019171 intron skd - chr3L 21023454 intron skd - chr3L_25_21015001 chr3L_21015001 CanS-JC 1596 chr3L 21118011 21118061 chr3L 21118121 21118171 18 110 2.0 6.0 4.0 3.6 160 chr3L 21118011 intron ko - chr3L 21118091 intron ko - chr3L 21118171 intron ko - chr3L_18_21115001 chr3L_21115001 CanS-JC 1597 chr3L 21151844 21151894 chr3L 21156954 21157004 flea 17 5109 4.5 3.5 4.0 3.4 5160 chr3L 21151844 intron Ac78C - chr3L 21154424 intron Ac78C - chr3L 21157004 intron Ac78C - chr3L_17_21150001 chr3L_21150001 CanS-JC 1598 chr3L 21243729 21243742 chr3L 21251309 21251331 412 8 7586 2.0 6.5 4.2 1.5 7602 chr3L 21243729 intron Eip78C + chr3L 21247530 intron Eip78C + chr3L 21251331 intron Eip78C + chr3L_8_21245001 chr3L_21245001 CanS-JC 1599 chr3L 21306124 21306168 chr3L 21315309 21315353 roo 7 9185 4.0 8.5 6.2 1.0 9229 chr3L 21306124 3` UTR CG7632 + chr3L 21310738 intron Pc - chr3L 21315353 3` UTR Pc - chr3L_7_21310001 chr3L_21310001 CanS-JC 1600 chr3L 21324675 21324730 chr3L 21324799 21324854 17 123 3.0 2.5 2.8 4.5 179 chr3L 21324675 intron Rab26 + chr3L 21324764 intron Rab26 + chr3L 21324854 intron Rab26 + chr3L_17_21320001 chr3L_21320001 CanS-JC 1601 chr3L 21372699 21372730 chr3L 21379233 21379264 McClintock 6 6534 5.5 7.0 6.2 0.8 6565 chr3L 21372699 intergenic not near genes chr3L 21375982 intergenic not near genes chr3L 21379264 intergenic not near genes chr3L_6_21375001 chr3L_21375001 CanS-JC 1602 chr3L 21399431 21399448 chr3L 21399540 21399557 9 109 8.0 13.0 10.5 0.8 126 chr3L 21399431 intron rgn + chr3L 21399494 intron rgn + chr3L 21399557 intron rgn + chr3L_9_21395001 chr3L_21395001 CanS-JC 1603 chr3L 21406970 21407025 chr3L 21407075 21407130 17 105 6.0 1.5 3.8 3.5 160 chr3L 21406970 intron rgn + chr3L 21407050 intron rgn + chr3L 21407130 intron rgn + chr3L_17_21405001 chr3L_21405001 CanS-JC 1604 chr3L 21431203 21431258 chr3L 21431336 21431391 23 133 4.0 4.0 4.0 4.6 188 chr3L 21431203 intron,exon barc -,CG33288 + chr3L 21431297 intron,exon barc -,CG33288 + chr3L 21431391 intron,exon barc -,CG33288 + chr3L_23_21430001 chr3L_21430001 CanS-JC 1605 chr3L 21463236 21463271 chr3L 21463339 21463373 10 102 4.0 6.0 5.0 1.7 137 chr3L 21463236 intergenic not near genes chr3L 21463304 intergenic not near genes chr3L 21463373 intergenic not near genes chr3L_10_21460001 chr3L_21460001 CanS-JC 1606 chr3L 21498826 21498854 chr3L 21500486 21500514 1360 7 1659 8.0 5.5 6.8 0.9 1688 chr3L 21498826 5` UTR,intron CR43933 +,Glg1 - chr3L 21499670 intron Glg1 - chr3L 21500514 intron Glg1 - chr3L_7_21495001 chr3L_21495001 CanS-JC 1607 chr3L 21575761 21575803 chr3L 21575863 21575905 10 100 2.0 0.0 1.0 5.0 144 chr3L 21575761 3` UTR CG32441 + chr3L 21575833 3` UTR CG32441 + chr3L 21575905 intergenic CG32441 +,CR43939 - chr3L_10_21575001 chr3L_21575001 CanS-JC 1608 chr3L 21585100 21585123 chr3L 21585408 21585431 6 308 5.5 4.5 5.0 1.0 331 chr3L 21585100 intergenic not near genes chr3L 21585266 intergenic not near genes chr3L 21585431 intergenic not near genes chr3L_6_21585001 chr3L_21585001 CanS-JC 1609 chr3L 21655869 21655899 chr3L 21655971 21656001 4 102 7.0 10.5 8.8 0.4 132 chr3L 21655869 intron CG43980 + chr3L 21655935 intron CG43980 + chr3L 21656001 intron CG43980 + chr3L_4_21655001 chr3L_21655001 CanS-JC 1610 chr3L 21736306 21736377 chr3L 21736548 21736604 15 228 0.0 2.5 1.2 6.8 298 chr3L 21736306 intergenic CR43888 + chr3L 21736455 intergenic CR43888 + chr3L 21736604 intergenic CR43888 + chr3L_15_21735001 chr3L_21735001 CanS-JC 1611 chr3L 21749296 21749344 chr3L 21754482 21754482 Doc 11 5182 8.5 4.5 6.5 1.5 5186 chr3L 21749296 intron Syn1 - chr3L 21751889 intron Syn1 - chr3L 21754482 intron Syn1 - chr3L_11_21750001 chr3L_21750001 CanS-JC 1612 chr3L 21758500 21758520 chr3L 21758871 21758891 9 371 28.5 19.5 24.0 0.4 391 chr3L 21758500 intron Syn1 - chr3L 21758696 intron Syn1 - chr3L 21758891 intron Syn1 - chr3L_9_21755001 chr3L_21755001 CanS-JC 1613 chr3L 21769056 21769083 chr3L 21769158 21769196 7 111 2.5 5.5 4.0 1.4 140 chr3L 21769056 intron,intron Syn1 -,CG42689 + chr3L 21769126 intron,intron Syn1 -,CG42689 + chr3L 21769196 intron,intron Syn1 -,CG42689 + chr3L_7_21765001 chr3L_21765001 CanS-JC 1614 chr3L 21770017 21770021 chr3L 21770130 21770134 4 113 2.5 9.5 6.0 0.6 117 chr3L 21770017 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770076 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770134 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L_4_21770001 chr3L_21770001 CanS-JC 1615 chr3L 21770029 21770040 chr3L 21770127 21770153 7 111 1.5 9.0 5.2 1.1 124 chr3L 21770029 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770091 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770153 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L_7_21770001 chr3L_21770001 CanS-JC 1616 chr3L 21776665 21776698 chr3L 21776778 21776811 8 113 5.0 5.5 5.2 1.3 146 chr3L 21776665 intron,intron CG42689 +,CG42552 + chr3L 21776738 intron,intron CG42689 +,CG42552 + chr3L 21776811 intron,intron CG42689 +,CG42552 + chr3L_8_21775001 chr3L_21775001 CanS-JC 1617 chr3L 21798739 21798793 chr3L 21798854 21798908 15 115 5.5 7.5 6.5 2.0 169 chr3L 21798739 intergenic not near genes chr3L 21798824 intergenic not near genes chr3L 21798908 intergenic not near genes chr3L_15_21795001 chr3L_21795001 CanS-JC 1618 chr3L 21799849 21799862 chr3L 21799963 21799976 13 114 3.5 8.0 5.8 1.9 127 chr3L 21799849 intergenic not near genes chr3L 21799912 intergenic not near genes chr3L 21799976 intergenic not near genes chr3L_13_21795001 chr3L_21795001 CanS-JC 1619 chr3L 21809964 21809970 chr3L 21810078 21810084 6 114 12.0 16.0 14.0 0.4 120 chr3L 21809964 intron eg + chr3L 21810024 intron eg + chr3L 21810084 intron eg + chr3L_6_21810001 chr3L_21810001 CanS-JC 1620 chr3L 21889990 21890048 chr3L 21890513 21890571 15 523 3.0 2.5 2.8 3.9 581 chr3L 21889990 intron mub + chr3L 21890280 intron mub + chr3L 21890571 intron mub + chr3L_15_21890001 chr3L_21890001 CanS-JC 1621 chr3L 21900998 21901043 chr3L 21901117 21901162 11 119 5.0 7.5 6.2 1.5 164 chr3L 21900998 intron mub + chr3L 21901080 intron mub + chr3L 21901162 intron mub + chr3L_11_21900001 chr3L_21900001 CanS-JC 1622 chr3L 22017509 22017558 chr3L 22017773 22017822 12 264 6.0 2.5 4.2 2.3 313 chr3L 22017509 intergenic not near genes chr3L 22017666 intergenic not near genes chr3L 22017822 intergenic not near genes chr3L_12_22015001 chr3L_22015001 CanS-JC 1623 chr3L 22099653 22099704 chr3L 22105865 22105916 3S18 14 6212 6.5 4.0 5.2 2.3 6263 chr3L 22099653 intergenic not near genes chr3L 22102784 intergenic not near genes chr3L 22105916 intergenic not near genes chr3L_14_22100001 chr3L_22100001 CanS-JC 1624 chr3L 22122145 22122195 chr3L 22122513 22122565 16 370 7.0 5.0 6.0 2.3 420 chr3L 22122145 5` UTR CR45236 + chr3L 22122355 intergenic CR45236 +,CR45235 + chr3L 22122565 intergenic CR45235 +,CR45236 + chr3L_16_22120001 chr3L_22120001 CanS-JC 1625 chr3L 22158717 22158761 chr3L 22158910 22158954 10 190 4.5 3.5 4.0 2.0 237 chr3L 22158717 intron olf413 + chr3L 22158836 intron olf413 + chr3L 22158954 intron olf413 + chr3L_10_22155001 chr3L_22155001 CanS-JC 1626 chr3L 22201524 22201575 chr3L 22201979 22202030 15 454 5.0 3.0 4.0 3.0 506 chr3L 22201524 intron olf413 + chr3L 22201777 intron olf413 + chr3L 22202030 intron olf413 + chr3L_15_22200001 chr3L_22200001 CanS-JC 1627 chr3L 22231554 22231569 chr3L 22231670 22231685 5 116 8.0 10.5 9.2 0.5 131 chr3L 22231554 intron olf413 + chr3L 22231620 intron olf413 + chr3L 22231685 intron olf413 + chr3L_5_22230001 chr3L_22230001 CanS-JC 1628 chr3L 22256410 22256453 chr3L 22256522 22256565 10 112 13.0 9.0 11.0 0.8 155 chr3L 22256410 intergenic not near genes chr3L 22256488 intergenic not near genes chr3L 22256565 intergenic not near genes chr3L_10_22255001 chr3L_22255001 CanS-JC 1629 chr3L 22308946 22308958 chr3L 22309060 22309067 4 112 0.0 6.0 3.0 1.0 121 chr3L 22308946 intron Ten-m - chr3L 22309006 intron Ten-m - chr3L 22309067 intron Ten-m - chr3L_4_22305001 chr3L_22305001 CanS-JC 1630 chr3L 22361915 22361966 chr3L 22362018 22362069 11 102 6.0 4.5 5.2 1.8 154 chr3L 22361915 intron Ten-m - chr3L 22361992 intron Ten-m - chr3L 22362069 intron Ten-m - chr3L_11_22360001 chr3L_22360001 CanS-JC 1631 chr3L 22382119 22382164 chr3L 22382231 22382276 21 112 3.0 8.5 5.8 3.1 157 chr3L 22382119 intron Ten-m - chr3L 22382198 intron Ten-m - chr3L 22382276 intron Ten-m - chr3L_21_22380001 chr3L_22380001 CanS-JC 1632 chr3L 22411343 22411396 chr3L 22411446 22411499 18 103 8.0 4.0 6.0 2.6 156 chr3L 22411343 intergenic not near genes chr3L 22411421 intergenic not near genes chr3L 22411499 intergenic not near genes chr3L_18_22410001 chr3L_22410001 CanS-JC 1633 chr3L 22413852 22413898 chr3L 22413962 22414004 13 109 4.0 4.5 4.2 2.5 152 chr3L 22413852 intergenic not near genes chr3L 22413928 intergenic not near genes chr3L 22414004 intergenic not near genes chr3L_13_22410001 chr3L_22410001 CanS-JC 1634 chr3L 22507098 22507155 chr3L 22507211 22507268 18 113 5.0 4.5 4.8 3.1 170 chr3L 22507098 intergenic not near genes chr3L 22507183 intergenic not near genes chr3L 22507268 intergenic not near genes chr3L_18_22505001 chr3L_22505001 CanS-JC 1635 chr3L 22522677 22522728 chr3L 22522780 22522831 11 103 5.0 3.5 4.2 2.1 154 chr3L 22522677 intergenic not near genes chr3L 22522754 intergenic not near genes chr3L 22522831 intergenic not near genes chr3L_11_22520001 chr3L_22520001 CanS-JC 1636 chr3L 22536660 22536707 chr3L 22536768 22536815 17 108 6.0 6.0 6.0 2.4 155 chr3L 22536660 intergenic not near genes chr3L 22536738 intergenic not near genes chr3L 22536815 intergenic not near genes chr3L_17_22535001 chr3L_22535001 CanS-JC 1637 chr3L 22538271 22538324 chr3L 22538381 22538435 13 108 1.5 4.0 2.8 3.4 164 chr3L 22538271 intergenic not near genes chr3L 22538353 intergenic not near genes chr3L 22538435 intergenic not near genes chr3L_13_22535001 chr3L_22535001 CanS-JC 1638 chr3L 22542029 22542071 chr3L 22542146 22542188 16 115 4.0 7.5 5.8 2.4 159 chr3L 22542029 intergenic not near genes chr3L 22542108 intergenic not near genes chr3L 22542188 intergenic not near genes chr3L_16_22540001 chr3L_22540001 CanS-JC 1639 chr3L 22543398 22543435 chr3L 22543504 22543538 6 105 6.0 4.5 5.2 1.0 140 chr3L 22543398 intergenic not near genes chr3L 22543468 intergenic not near genes chr3L 22543538 intergenic not near genes chr3L_6_22540001 chr3L_22540001 CanS-JC 1640 chr3L 22545043 22545086 chr3L 22545236 22545279 11 193 4.5 2.5 3.5 2.4 236 chr3L 22545043 intergenic not near genes chr3L 22545161 intergenic not near genes chr3L 22545279 intergenic not near genes chr3L_11_22545001 chr3L_22545001 CanS-JC 1641 chr3L 22555744 22555800 chr3L 22563240 22563296 blood 16 7494 5.0 4.5 4.8 2.8 7552 chr3L 22555744 intergenic not near genes chr3L 22559520 intergenic not near genes chr3L 22563296 intergenic not near genes chr3L_16_22555001 chr3L_22555001 CanS-JC 1642 chr3L 22577596 22577643 chr3L 22582410 22582457 Doc 8 4814 6.0 6.0 6.0 1.1 4861 chr3L 22577596 intergenic not near genes chr3L 22580026 intergenic not near genes chr3L 22582457 3` UTR CG14459 - chr3L_8_22580001 chr3L_22580001 CanS-JC 1643 chr3L 22595989 22596042 chr3L 22596101 22596154 19 112 3.5 3.0 3.2 4.5 165 chr3L 22595989 intron CG14459 - chr3L 22596072 intron CG14459 - chr3L 22596154 intron CG14459 - chr3L_19_22595001 chr3L_22595001 CanS-JC 1644 chr3L 22617166 22617221 chr3L 22624644 22624699 blood 16 7478 3.0 2.5 2.8 4.2 7533 chr3L 22617166 intron CG14459 - chr3L 22620932 intron CG14459 - chr3L 22624699 intron CG14459 - chr3L_16_22620001 chr3L_22620001 CanS-JC 1645 chr3L 22644814 22644856 chr3L 22645068 22645110 17 254 6.0 5.0 5.5 2.6 296 chr3L 22644814 intergenic CR45381 + chr3L 22644962 intergenic CR45381 + chr3L 22645110 intergenic not near genes chr3L_17_22640001 chr3L_22640001 CanS-JC 1646 chr3L 22682195 22682246 chr3L 22682321 22682372 16 126 4.5 3.5 4.0 3.2 177 chr3L 22682195 intergenic not near genes chr3L 22682284 intergenic not near genes chr3L 22682372 intergenic not near genes chr3L_16_22680001 chr3L_22680001 CanS-JC 1647 chr3L 22701578 22701628 chr3L 22701687 22701737 26 108 3.5 5.5 4.5 4.7 159 chr3L 22701578 intergenic not near genes chr3L 22701658 intergenic not near genes chr3L 22701737 intergenic not near genes chr3L_26_22700001 chr3L_22700001 CanS-JC 1648 chr3L 22724054 22724104 chr3L 22724162 22724212 7 108 3.0 2.0 2.5 2.0 158 chr3L 22724054 intergenic mael + chr3L 22724133 intergenic mael + chr3L 22724212 intergenic mael + chr3L_7_22720001 chr3L_22720001 CanS-JC 1649 chr3L 22726223 22726450 chr3L 22726333 22726560 24 111 5.5 5.5 5.5 3.7 337 chr3L 22726223 3` UTR mael + chr3L 22726392 3` UTR CG14450 - chr3L 22726560 3` UTR CG14450 - chr3L_24_22725001 chr3L_22725001 CanS-JC 1650 chr3L 22743494 22743534 chr3L 22744707 22744747 NOF 9 1213 3.5 4.5 4.0 1.8 1253 chr3L 22743494 intron CG7369 + chr3L 22744120 intron CG7369 + chr3L 22744747 intron CG7369 + chr3L_9_22740001 chr3L_22740001 CanS-JC 1651 chr3L 22750711 22750731 chr3L 22751158 22751178 INE-1 4 447 8.5 4.0 6.2 0.6 467 chr3L 22750711 intron SPoCk + chr3L 22750944 intron SPoCk + chr3L 22751178 intron SPoCk + chr3L_4_22750001 chr3L_22750001 CanS-JC 1652 chr3L 22752481 22752549 chr3L 22752814 22752867 18 319 0.0 2.5 1.2 8.2 386 chr3L 22752481 intron SPoCk + chr3L 22752674 intron SPoCk + chr3L 22752867 intron SPoCk + chr3L_18_22750001 chr3L_22750001 CanS-JC 1653 chr3L 22759654 22759707 chr3L 22759776 22759820 6 118 8.0 0.0 4.0 1.2 166 chr3L 22759654 intron SPoCk + chr3L 22759737 intron SPoCk + chr3L 22759820 intron SPoCk + chr3L_6_22755001 chr3L_22755001 CanS-JC 1654 chr3L 22761362 22761420 chr3L 22766822 22766855 Ivk 19 5459 6.0 4.0 5.0 3.2 5493 chr3L 22761362 intron SPoCk + chr3L 22764108 intron SPoCk + chr3L 22766855 intron SPoCk + chr3L_19_22760001 chr3L_22760001 CanS-JC 1655 chr3L 22825386 22825418 chr3L 22825515 22825547 13 129 2.5 4.5 3.5 2.9 161 chr3L 22825386 intron jim - chr3L 22825466 intron jim - chr3L 22825547 intron jim - chr3L_13_22825001 chr3L_22825001 CanS-JC 1656 chr3L 22843883 22843938 chr3L 22844199 22844227 11 312 3.0 4.0 3.5 2.4 344 chr3L 22843883 intergenic not near genes chr3L 22844055 intergenic not near genes chr3L 22844227 intergenic not near genes chr3L_11_22840001 chr3L_22840001 CanS-JC 1657 chr3L 22848681 22848737 chr3L 22848797 22848853 12 116 1.0 2.5 1.8 4.3 172 chr3L 22848681 intergenic not near genes chr3L 22848767 intergenic not near genes chr3L 22848853 intergenic not near genes chr3L_12_22845001 chr3L_22845001 CanS-JC 1658 chr3L 22849422 22849434 chr3L 22851197 22851209 6 1775 3.0 0.0 1.5 2.4 1787 chr3L 22849422 intergenic not near genes chr3L 22850316 5` UTR CR43426 + chr3L 22851209 intron CR43426 + chr3L_6_22850001 chr3L_22850001 CanS-JC 1659 chr3L 22865965 22866011 chr3L 22867124 22867171 Doc 9 1159 2.0 1.0 1.5 3.6 1206 chr3L 22865965 intron CG33170 + chr3L 22866568 intron CG33170 + chr3L 22867171 intron CG33170 + chr3L_9_22865001 chr3L_22865001 CanS-JC 1660 chr3L 19220633 19220636 chr3L 22908066 22908066 5 3687432 21.0 21.0 21.0 0.2 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_5_21060001 chr3L_21060001 CanS-JC 1661 chr3L 19220633 19220637 chr3L 22908067 22908067 6 3687432 21.0 21.0 21.0 0.3 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_6_21060001 chr3L_21060001 CanS-JC 1662 chr3L 22925137 22925167 chr3L 22925531 22925561 5 394 2.5 6.5 4.5 0.9 424 chr3L 22925137 intergenic not near genes chr3L 22925349 intergenic not near genes chr3L 22925561 intergenic not near genes chr3L_5_22925001 chr3L_22925001 CanS-JC 1663 chr3L 22974348 22974395 chr3L 22974453 22974491 10 104 5.0 6.0 5.5 1.5 143 chr3L 22974348 intergenic not near genes chr3L 22974420 intergenic not near genes chr3L 22974491 intergenic not near genes chr3L_10_22970001 chr3L_22970001 CanS-JC 1664 chr3L 22984813 22984816 chr3L 22984922 22984928 4 111 2.5 7.5 5.0 0.7 115 chr3L 22984813 intergenic not near genes chr3L 22984870 intergenic not near genes chr3L 22984928 intergenic not near genes chr3L_4_22980001 chr3L_22980001 CanS-JC 1665 chr3L 22989840 22989886 chr3L 22996840 22996886 297 9 7000 8.5 8.5 8.5 0.9 7046 chr3L 22989840 intergenic not near genes chr3L 22993363 intergenic not near genes chr3L 22996886 intergenic not near genes chr3L_9_22990001 chr3L_22990001 CanS-JC 1666 chr3L 23003129 23003184 chr3L 23003266 23003321 13 137 6.0 6.5 6.2 1.8 192 chr3L 23003129 intron nrm + chr3L 23003225 intron nrm + chr3L 23003321 intron nrm + chr3L_13_23000001 chr3L_23000001 CanS-JC 1667 chr3L 23004881 23004938 chr3L 23005233 23005290 18 352 5.0 4.5 4.8 3.1 409 chr3L 23004881 intron nrm + chr3L 23005086 intron nrm + chr3L 23005290 intron nrm + chr3L_18_23005001 chr3L_23005001 CanS-JC 1668 chr3L 23035852 23035895 chr3L 23036769 23036812 INE-1 13 917 3.0 2.5 2.8 3.4 960 chr3L 23035852 intron nrm + chr3L 23036332 intron nrm + chr3L 23036812 intron nrm + chr3L_13_23035001 chr3L_23035001 CanS-JC 1669 chr3L 23213257 23213308 chr3L 23213650 23213701 15 393 5.5 5.5 5.5 2.3 444 chr3L 23213257 intron nAChRalpha4 + chr3L 23213479 intron nAChRalpha4 + chr3L 23213701 intron nAChRalpha4 + chr3L_15_23210001 chr3L_23210001 CanS-JC 1670 chr3L 23271715 23271737 chr3L 23276855 23276877 invader2 4 5140 0.0 8.5 4.2 0.8 5162 chr3L 23271715 intron nAChRalpha4 + chr3L 23274296 intron nAChRalpha4 + chr3L 23276877 intron nAChRalpha4 + chr3L_4_23270001 chr3L_23270001 CanS-JC 1671 chr3L 23468013 23468020 chr3L 23468154 23468161 5 141 22.5 29.0 25.8 0.2 148 chr3L 23468013 intergenic not near genes chr3L 23468087 intergenic not near genes chr3L 23468161 intergenic not near genes chr3L_5_23465001 chr3L_23465001 CanS-JC 1672 chr3L 23875504 23875553 chr3L 23875608 23875660 14 105 6.0 7.0 6.5 1.9 156 chr3L 23875504 intron CG40470 - chr3L 23875582 intron CG40470 - chr3L 23875660 intron CG40470 - chr3L_14_23875001 chr3L_23875001 CanS-JC 1673 chr3L 24012391 24012428 chr3L 24020758 24020795 roo 13 8366 4.5 5.5 5.0 2.2 8404 chr3L 24012391 intergenic not near genes chr3L 24016593 intergenic not near genes chr3L 24020795 intergenic not near genes chr3L_13_24015001 chr3L_24015001 CanS-JC 1674 chr3L 24168772 24168812 chr3L 24176126 24176166 ZAM 10 7353 3.5 1.5 2.5 2.9 7394 chr3L 24168772 intron Snap25 + chr3L 24172469 intron Snap25 + chr3L 24176166 intron Snap25 + chr3L_10_24170001 chr3L_24170001 CanS-JC 1675 chr3L 24791870 24791908 chr3L 24796675 24796713 Doc 7 4805 3.0 5.0 4.0 1.4 4843 chr3L 24791870 intergenic not near genes chr3L 24794292 intergenic not near genes chr3L 24796713 intergenic not near genes chr3L_7_24790001 chr3L_24790001 CanS-JC 1676 chr3L 25008018 25008075 chr3L 25008126 25008183 10 108 2.5 5.5 4.0 2.0 165 chr3L 25008018 intergenic not near genes chr3L 25008100 intergenic not near genes chr3L 25008183 intergenic not near genes chr3L_10_25005001 chr3L_25005001 CanS-JC 1677 chr3L 25331628 25331640 chr3L 25331745 25331757 6 117 6.5 4.0 5.2 1.0 129 chr3L 25331628 intergenic not near genes chr3L 25331692 intergenic not near genes chr3L 25331757 intergenic not near genes chr3L_6_25330001 chr3L_25330001 CanS-JC 1678 chr3L 26026747 26026750 chr3L 26026863 26026866 5 116 18.0 23.5 20.8 0.2 119 chr3L 26026747 intergenic not near genes chr3L 26026806 intergenic not near genes chr3L 26026866 intergenic not near genes chr3L_5_26025001 chr3L_26025001 CanS-JC 1679 chr3L 26345000 26345042 chr3L 26345304 26345346 14 304 12.0 19.0 15.5 0.8 346 chr3L 26345000 intergenic not near genes chr3L 26345173 intergenic not near genes chr3L 26345346 intergenic not near genes chr3L_14_26345001 chr3L_26345001 CanS-JC 1680 chr3L 27261430 27261482 chr3L 27261527 27261586 13 103 2.0 4.5 3.2 3.1 156 chr3L 27261430 intergenic not near genes chr3L 27261508 intergenic not near genes chr3L 27261586 intergenic not near genes chr3L_13_27260001 chr3L_27260001 CanS-JC 1681 chr3R 2556880 2556936 chr3R 2557587 2557643 10 707 15.5 15.5 15.5 0.6 763 chr3R 2556880 intron CG41056 - chr3R 2557262 intron CG41056 - chr3R 2557643 intron CG41056 - chr3R_10_2555001 chr3R_2555001 CanS-JC 1682 chr3R 4132876 4132931 chr3R 4133056 4133111 10 180 1.0 0.5 0.8 5.6 235 chr3R 4132876 intron Gfat1 + chr3R 4132994 intron Gfat1 + chr3R 4133111 intron Gfat1 + chr3R_10_4130001 chr3R_4130001 CanS-JC 1683 chr3R 4195457 4195505 chr3R 4195791 4195839 13 334 3.0 5.5 4.2 2.5 382 chr3R 4195457 intergenic not near genes chr3R 4195648 intergenic not near genes chr3R 4195839 intergenic not near genes chr3R_13_4195001 chr3R_4195001 CanS-JC 1684 chr3R 4206051 4206101 chr3R 4211652 4211702 mdg3 9 5601 6.5 7.0 6.8 1.2 5651 chr3R 4206051 intron CG14636 - chr3R 4208876 intron CG14636 - chr3R 4211702 intron CG14636 - chr3R_9_4205001 chr3R_4205001 CanS-JC 1685 chr3R 4366735 4366789 chr3R 4375144 4375184 roo 13 8407 5.0 5.5 5.2 2.1 8449 chr3R 4366735 3` UTR CG1090 + chr3R 4370960 intergenic not near genes chr3R 4375184 5` UTR CR44922 + chr3R_13_4370001 chr3R_4370001 CanS-JC 1686 chr3R 4376548 4376570 chr3R 4377023 4377045 10 475 3.5 5.5 4.5 1.8 497 chr3R 4376548 5` UTR CR44922 + chr3R 4376796 5` UTR CR44922 + chr3R 4377045 5` UTR CR44922 + chr3R_10_4375001 chr3R_4375001 CanS-JC 1687 chr3R 4408390 4408434 chr3R 4412720 4412764 Juan 19 4330 4.5 6.0 5.2 3.1 4374 chr3R 4408390 intron CG32944 - chr3R 4410577 intron CG32944 - chr3R 4412764 intron CG32944 - chr3R_19_4410001 chr3R_4410001 CanS-JC 1688 chr3R 4493130 4493181 chr3R 4493235 4493286 20 104 5.5 5.0 5.2 3.2 156 chr3R 4493130 3` UTR CG34357 - chr3R 4493208 3` UTR CG34357 - chr3R 4493286 3` UTR CG34357 - chr3R_20_4490001 chr3R_4490001 CanS-JC 1689 chr3R 4540579 4540631 chr3R 4540801 4540849 18 221 4.5 5.5 5.0 3.0 270 chr3R 4540579 intron CG34357 - chr3R 4540714 intron CG34357 - chr3R 4540849 intron CG34357 - chr3R_18_4540001 chr3R_4540001 CanS-JC 1690 chr3R 4609527 4609575 chr3R 4610717 4610765 1360 17 1190 6.0 4.5 5.2 2.7 1238 chr3R 4609527 intergenic not near genes chr3R 4610146 intergenic not near genes chr3R 4610765 intergenic not near genes chr3R_17_4610001 chr3R_4610001 CanS-JC 1691 chr3R 4625288 4625343 chr3R 4625700 4625755 23 411 5.5 10.5 8.0 2.6 467 chr3R 4625288 intron 5-HT2A + chr3R 4625522 intron 5-HT2A + chr3R 4625755 intron 5-HT2A + chr3R_23_4625001 chr3R_4625001 CanS-JC 1692 chr3R 4632224 4632259 chr3R 4632415 4632450 10 191 3.0 4.0 3.5 2.2 226 chr3R 4632224 intron 5-HT2A + chr3R 4632337 intron 5-HT2A + chr3R 4632450 intron 5-HT2A + chr3R_10_4630001 chr3R_4630001 CanS-JC 1693 chr3R 4669528 4669564 chr3R 4669807 4669843 12 279 8.5 7.5 8.0 1.3 315 chr3R 4669528 intron CG43427 + chr3R 4669686 intron CG43427 + chr3R 4669843 intron CG43427 + chr3R_12_4665001 chr3R_4665001 CanS-JC 1694 chr3R 4683159 4683190 chr3R 4684944 4684975 S-element 10 1785 7.5 7.0 7.2 1.2 1816 chr3R 4683159 intron CG43427 + chr3R 4684067 intron CG43427 + chr3R 4684975 intron CG43427 + chr3R_10_4680001 chr3R_4680001 CanS-JC 1695 chr3R 4728938 4728980 chr3R 4729045 4729087 17 107 6.0 8.0 7.0 2.1 149 chr3R 4728938 intron Nep2 - chr3R 4729012 intron Nep2 - chr3R 4729087 intron Nep2 - chr3R_17_4725001 chr3R_4725001 CanS-JC 1696 chr3R 4733649 4733701 chr3R 4733799 4733851 14 150 4.5 3.5 4.0 2.8 202 chr3R 4733649 intergenic not near genes chr3R 4733750 intergenic not near genes chr3R 4733851 intergenic not near genes chr3R_14_4730001 chr3R_4730001 CanS-JC 1697 chr3R 4753223 4753262 chr3R 4757552 4757591 F-element 15 4329 6.0 12.0 9.0 1.5 4368 chr3R 4753223 intron,intron atms +,CG44098 - chr3R 4755407 intron,intron atms +,CG44098 - chr3R 4757591 intron,exon atms +,CG44098 - chr3R_15_4755001 chr3R_4755001 CanS-JC 1698 chr3R 4769145 4769191 chr3R 4769249 4769295 13 104 5.5 5.5 5.5 2.0 150 chr3R 4769145 intron,intron atms +,CG44098 - chr3R 4769220 intron,intron atms +,CG44098 - chr3R 4769295 intron,intron atms +,CG44098 - chr3R_13_4765001 chr3R_4765001 CanS-JC 1699 chr3R 4796086 4796126 chr3R 4796235 4796275 13 149 7.0 1.0 4.0 2.6 189 chr3R 4796086 intron ctrip - chr3R 4796180 intron ctrip - chr3R 4796275 intron ctrip - chr3R_13_4795001 chr3R_4795001 CanS-JC 1700 chr3R 4861541 4861597 chr3R 4861646 4861704 23 105 2.5 4.5 3.5 5.1 163 chr3R 4861541 intron opa + chr3R 4861622 intron opa + chr3R 4861704 intron opa + chr3R_23_4860001 chr3R_4860001 CanS-JC 1701 chr3R 4887454 4887500 chr3R 4894857 4894903 rover 17 7403 7.5 3.5 5.5 2.6 7449 chr3R 4887454 intergenic not near genes chr3R 4891178 intergenic not near genes chr3R 4894903 intergenic not near genes chr3R_17_4890001 chr3R_4890001 CanS-JC 1702 chr3R 4922318 4922363 chr3R 4922423 4922468 12 105 5.0 4.5 4.8 2.1 150 chr3R 4922318 intron Cdep + chr3R 4922393 intron Cdep + chr3R 4922468 intron Cdep + chr3R_12_4920001 chr3R_4920001 CanS-JC 1703 chr3R 4943590 4943623 chr3R 4943721 4943754 18 131 2.5 3.5 3.0 4.5 164 chr3R 4943590 intron Cdep + chr3R 4943672 intron Cdep + chr3R 4943754 intron Cdep + chr3R_18_4940001 chr3R_4940001 CanS-JC 1704 chr3R 4981386 4981443 chr3R 4981491 4981548 26 104 2.0 4.0 3.0 6.5 162 chr3R 4981386 intergenic not near genes chr3R 4981467 intergenic not near genes chr3R 4981548 intergenic CG14662 - chr3R_26_4980001 chr3R_4980001 CanS-JC 1705 chr3R 4997516 4997519 chr3R 9582233 9582268 4 4584741 18.5 7.0 12.8 0.3 4584752 chr3R 4997516 intron CG2022 - chr3R 7289892 intron rn - chr3R 9582268 intron CG8301 + chr3R_4_7285001 chr3R_7285001 CanS-JC 1706 chr3R 5045820 5045878 chr3R 5052948 5053006 HMS-Beagle 12 7128 4.0 4.0 4.0 2.4 7186 chr3R 5045820 3` UTR CR43635 - chr3R 5049413 intergenic not near genes chr3R 5053006 intergenic CR45588 - chr3R_12_5045001 chr3R_5045001 CanS-JC 1707 chr3R 5067955 5068013 chr3R 5073498 5073556 mdg3 18 5543 5.0 3.0 4.0 3.6 5601 chr3R 5067955 intergenic not near genes chr3R 5070756 intergenic not near genes chr3R 5073556 intergenic not near genes chr3R_18_5070001 chr3R_5070001 CanS-JC 1708 chr3R 5105532 5105580 chr3R 5105641 5105689 17 109 3.5 3.0 3.2 4.0 157 chr3R 5105532 intergenic not near genes chr3R 5105610 intergenic not near genes chr3R 5105689 intergenic not near genes chr3R_17_5105001 chr3R_5105001 CanS-JC 1709 chr3R 5236195 5236235 chr3R 5236349 5236389 17 154 5.0 4.5 4.8 2.9 194 chr3R 5236195 3` UTR,3` UTR Mms19 +,rtp - chr3R 5236292 3` UTR rtp - chr3R 5236389 3` UTR rtp - chr3R_17_5235001 chr3R_5235001 CanS-JC 1710 chr3R 5250886 5250914 chr3R 5251022 5251050 10 136 2.0 9.5 5.8 1.5 164 chr3R 5250886 intron CG12163 - chr3R 5250968 intron CG12163 - chr3R 5251050 intron CG12163 - chr3R_10_5250001 chr3R_5250001 CanS-JC 1711 chr3R 5278067 5278110 chr3R 5278174 5278217 16 107 5.0 6.5 5.8 2.4 150 chr3R 5278067 intron mtd - chr3R 5278142 intron mtd - chr3R 5278217 intron mtd - chr3R_16_5275001 chr3R_5275001 CanS-JC 1712 chr3R 5282966 5282986 chr3R 5283071 5283090 12 102 11.0 12.0 11.5 1.0 124 chr3R 5282966 intron mtd - chr3R 5283028 intron mtd - chr3R 5283090 intron mtd - chr3R_12_5280001 chr3R_5280001 CanS-JC 1713 chr3R 5338385 5338422 chr3R 5343588 5343625 Rt1c 8 5202 3.5 7.5 5.5 1.2 5240 chr3R 5338385 intron mtd - chr3R 5341005 intron mtd - chr3R 5343625 intron mtd - chr3R_8_5340001 chr3R_5340001 CanS-JC 1714 chr3R 5385948 5385985 chr3R 5386145 5386182 9 196 10.0 3.5 6.8 1.2 234 chr3R 5385948 intron kkv - chr3R 5386065 intron kkv - chr3R 5386182 intron kkv - chr3R_9_5385001 chr3R_5385001 CanS-JC 1715 chr3R 5445942 5445984 chr3R 5452428 5452470 Burdock 15 6486 4.0 9.0 6.5 2.0 6528 chr3R 5445942 intron CG14669 + chr3R 5449206 intron CG14669 + chr3R 5452470 intron CG14669 + chr3R_15_5445001 chr3R_5445001 CanS-JC 1716 chr3R 5698094 5698138 chr3R 5698215 5698258 9 120 4.5 5.0 4.8 1.6 164 chr3R 5698094 intron plx + chr3R 5698176 intron plx + chr3R 5698258 intron plx + chr3R_9_5695001 chr3R_5695001 CanS-JC 1717 chr3R 5745994 5746045 chr3R 5746261 5746312 pogo 10 267 4.5 11.0 7.8 1.1 318 chr3R 5745994 3` UTR Madm + chr3R 5746153 3` UTR Madm + chr3R 5746312 3` UTR Madm + chr3R_10_5745001 chr3R_5745001 CanS-JC 1718 chr3R 5746994 5747037 chr3R 5753211 5753254 diver 8 6217 5.0 3.5 4.2 1.5 6260 chr3R 5746994 intergenic Madm + chr3R 5750124 intergenic not near genes chr3R 5753254 intergenic CG2091 - chr3R_8_5750001 chr3R_5750001 CanS-JC 1719 chr3R 5809087 5809141 chr3R 5809354 5809408 pogo 19 266 7.5 4.5 6.0 2.7 321 chr3R 5809087 3` UTR CG11000 + chr3R 5809248 3` UTR CG11000 + chr3R 5809408 3` UTR CG11000 + chr3R_19_5805001 chr3R_5805001 CanS-JC 1720 chr3R 5896943 5896995 chr3R 5897328 5897380 19 385 5.0 3.5 4.2 3.7 437 chr3R 5896943 intron CG34113 - chr3R 5897162 intron CG34113 - chr3R 5897380 intron CG34113 - chr3R_19_5895001 chr3R_5895001 CanS-JC 1721 chr3R 5927543 5927581 chr3R 5927809 5927847 pogo 9 266 8.0 4.0 6.0 1.3 304 chr3R 5927543 intron CG34113 - chr3R 5927695 intron CG34113 - chr3R 5927847 intron CG34113 - chr3R_9_5925001 chr3R_5925001 CanS-JC 1722 chr3R 5931440 5931454 chr3R 5931554 5931568 5 114 4.5 9.5 7.0 0.6 128 chr3R 5931440 intron CG34113 - chr3R 5931504 intron CG34113 - chr3R 5931568 intron CG34113 - chr3R_5_5930001 chr3R_5930001 CanS-JC 1723 chr3R 5934736 5934767 chr3R 5934878 5934909 5 142 5.0 4.0 4.5 0.9 173 chr3R 5934736 intron CG34113 - chr3R 5934822 intron CG34113 - chr3R 5934909 intron CG34113 - chr3R_5_5930001 chr3R_5930001 CanS-JC 1724 chr3R 5942444 5942499 chr3R 5942568 5942623 19 124 2.0 1.0 1.5 7.6 179 chr3R 5942444 intron CG34113 - chr3R 5942534 intron CG34113 - chr3R 5942623 intron CG34113 - chr3R_19_5940001 chr3R_5940001 CanS-JC 1725 chr3R 5943383 5943417 chr3R 5943488 5943522 9 105 1.5 6.0 3.8 1.9 139 chr3R 5943383 intron CG34113 - chr3R 5943452 intron CG34113 - chr3R 5943522 intron CG34113 - chr3R_9_5940001 chr3R_5940001 CanS-JC 1726 chr3R 6015567 6015581 chr3R 6015678 6015692 4 111 0.0 10.0 5.0 0.7 125 chr3R 6015567 intergenic not near genes chr3R 6015630 intergenic not near genes chr3R 6015692 intergenic not near genes chr3R_4_6015001 chr3R_6015001 CanS-JC 1727 chr3R 6015938 6015995 chr3R 6024445 6024502 Tirant 18 8507 5.0 5.0 5.0 3.0 8564 chr3R 6015938 intergenic not near genes chr3R 6020220 intergenic not near genes chr3R 6024502 intergenic not near genes chr3R_18_6020001 chr3R_6020001 CanS-JC 1728 chr3R 6042552 6042610 chr3R 6042675 6042733 16 121 1.5 3.5 2.5 4.6 181 chr3R 6042552 intergenic not near genes chr3R 6042642 intergenic not near genes chr3R 6042733 intergenic not near genes chr3R_16_6040001 chr3R_6040001 CanS-JC 1729 chr3R 6043656 6043706 chr3R 6043759 6043806 19 102 5.0 4.0 4.5 3.5 150 chr3R 6043656 intergenic not near genes chr3R 6043731 intergenic not near genes chr3R 6043806 intergenic not near genes chr3R_19_6040001 chr3R_6040001 CanS-JC 1730 chr3R 6141905 6141947 chr3R 6142008 6142050 14 102 6.5 6.5 6.5 1.9 145 chr3R 6141905 intergenic not near genes chr3R 6141978 intergenic not near genes chr3R 6142050 intergenic not near genes chr3R_14_6140001 chr3R_6140001 CanS-JC 1731 chr3R 6158498 6158540 chr3R 6167107 6167121 Tirant 16 8607 3.5 4.0 3.8 3.3 8623 chr3R 6158498 intergenic not near genes chr3R 6162810 intergenic not near genes chr3R 6167121 intergenic CG1077 + chr3R_16_6160001 chr3R_6160001 CanS-JC 1732 chr3R 6175146 6175198 chr3R 6182444 6182496 HMS-Beagle2 15 7298 3.0 6.0 4.5 2.7 7350 chr3R 6175146 intergenic Osi1 + chr3R 6178821 intron CR45194 + chr3R 6182496 intergenic CR45194 + chr3R_15_6175001 chr3R_6175001 CanS-JC 1733 chr3R 6206268 6206316 chr3R 6206511 6206559 BS 17 243 3.0 3.5 3.2 4.0 291 chr3R 6206268 exon Osi24 + chr3R 6206414 intron Osi24 + chr3R 6206559 intron Osi24 + chr3R_17_6205001 chr3R_6205001 CanS-JC 1734 chr3R 6343683 6343702 chr3R 6343812 6343831 7 129 6.5 1.5 4.0 1.4 148 chr3R 6343683 exon CG10298 + chr3R 6343757 3` UTR CG10298 + chr3R 6343831 intergenic CG10298 +,CG17919 + chr3R_7_6340001 chr3R_6340001 CanS-JC 1735 chr3R 6461552 6461603 chr3R 6461659 6461709 15 106 4.0 1.5 2.8 3.9 157 chr3R 6461552 intergenic not near genes chr3R 6461630 intergenic not near genes chr3R 6461709 intergenic not near genes chr3R_15_6460001 chr3R_6460001 CanS-JC 1736 chr3R 6510002 6510048 chr3R 6515109 6515155 jockey 8 5107 4.0 4.5 4.2 1.5 5153 chr3R 6510002 intergenic not near genes chr3R 6512578 intergenic not near genes chr3R 6515155 intergenic not near genes chr3R_8_6510001 chr3R_6510001 CanS-JC 1737 chr3R 6515217 6515248 chr3R 6515334 6515364 15 116 2.5 6.5 4.5 2.7 147 chr3R 6515217 intergenic not near genes chr3R 6515290 intergenic not near genes chr3R 6515364 intergenic not near genes chr3R_15_6515001 chr3R_6515001 CanS-JC 1738 chr3R 6516099 6516152 chr3R 6516206 6516259 18 105 4.5 5.0 4.8 3.1 160 chr3R 6516099 intergenic not near genes chr3R 6516179 intergenic not near genes chr3R 6516259 intergenic not near genes chr3R_18_6515001 chr3R_6515001 CanS-JC 1739 chr3R 6550296 6550346 chr3R 6550403 6550453 16 106 2.5 4.0 3.2 3.8 157 chr3R 6550296 intron dpr11 - chr3R 6550374 intron dpr11 - chr3R 6550453 intron dpr11 - chr3R_16_6550001 chr3R_6550001 CanS-JC 1740 chr3R 6561927 6561973 chr3R 6562037 6562083 17 109 3.0 5.5 4.2 3.3 156 chr3R 6561927 intron dpr11 - chr3R 6562005 intron dpr11 - chr3R 6562083 intron dpr11 - chr3R_17_6560001 chr3R_6560001 CanS-JC 1741 chr3R 6568011 6568061 chr3R 6568120 6568170 15 109 6.5 4.5 5.5 2.3 159 chr3R 6568011 intron dpr11 - chr3R 6568090 intron dpr11 - chr3R 6568170 intron dpr11 - chr3R_15_6565001 chr3R_6565001 CanS-JC 1742 chr3R 6571699 6571753 chr3R 6571811 6571865 13 112 3.5 6.0 4.8 2.2 166 chr3R 6571699 intron dpr11 - chr3R 6571782 intron dpr11 - chr3R 6571865 intron dpr11 - chr3R_13_6570001 chr3R_6570001 CanS-JC 1743 chr3R 6589882 6589931 chr3R 6589990 6590039 13 108 2.5 3.0 2.8 3.4 157 chr3R 6589882 intron dpr11 - chr3R 6589960 intron dpr11 - chr3R 6590039 intron dpr11 - chr3R_13_6585001 chr3R_6585001 CanS-JC 1744 chr3R 6624233 6624261 chr3R 6624341 6624369 10 107 8.5 1.0 4.8 1.7 136 chr3R 6624233 intergenic not near genes chr3R 6624301 intergenic not near genes chr3R 6624369 intergenic not near genes chr3R_10_6620001 chr3R_6620001 CanS-JC 1745 chr3R 6639885 6639907 chr3R 6639989 6640011 8 104 5.5 0.0 2.8 2.1 126 chr3R 6639885 intergenic not near genes chr3R 6639948 intergenic not near genes chr3R 6640011 intergenic not near genes chr3R_8_6635001 chr3R_6635001 CanS-JC 1746 chr3R 6643475 6643532 chr3R 6643634 6643691 15 160 35.0 46.0 40.5 0.4 216 chr3R 6643475 intron CG1315 - chr3R 6643583 intron CG1315 - chr3R 6643691 intron CG1315 - chr3R_15_6640001 chr3R_6640001 CanS-JC 1747 chr3R 6655739 6655793 chr3R 6656037 6656091 16 298 3.0 6.0 4.5 2.9 352 chr3R 6655739 exon Taf1 + chr3R 6655915 3` UTR Taf1 + chr3R 6656091 intergenic Taf1 +,CG1307 - chr3R_16_6655001 chr3R_6655001 CanS-JC 1748 chr3R 6689311 6689369 chr3R 6689419 6689477 14 107 3.0 3.0 3.0 3.5 166 chr3R 6689311 intergenic Ccp84Af - chr3R 6689394 intergenic Ccp84Af - chr3R 6689477 intergenic Ccp84Af - chr3R_14_6685001 chr3R_6685001 CanS-JC 1749 chr3R 6690656 6690699 chr3R 6690767 6690810 12 111 3.5 2.5 3.0 3.0 154 chr3R 6690656 intergenic Ccp84Ae -,Ccp84Af - chr3R 6690733 intergenic Ccp84Ae -,Ccp84Af - chr3R 6690810 intergenic Ccp84Ae - chr3R_12_6690001 chr3R_6690001 CanS-JC 1750 chr3R 6697290 6697311 chr3R 6697402 6697423 9 112 5.0 4.0 4.5 1.6 133 chr3R 6697290 intergenic not near genes chr3R 6697356 intergenic not near genes chr3R 6697423 intergenic not near genes chr3R_9_6695001 chr3R_6695001 CanS-JC 1751 chr3R 6705663 6705710 chr3R 6705913 6705960 15 250 0.0 4.0 2.0 5.0 297 chr3R 6705663 intergenic not near genes chr3R 6705812 intergenic not near genes chr3R 6705960 intergenic not near genes chr3R_15_6705001 chr3R_6705001 CanS-JC 1752 chr3R 6737477 6737525 chr3R 6739290 6739338 Doc 20 1812 5.5 4.0 4.8 3.4 1861 chr3R 6737477 intron pb - chr3R 6738408 intron pb - chr3R 6739338 intron pb - chr3R_20_6735001 chr3R_6735001 CanS-JC 1753 chr3R 6773537 6773583 chr3R 6773652 6773698 14 115 7.5 9.0 8.2 1.5 161 chr3R 6773537 intron CR42721 + chr3R 6773618 intron CR42721 + chr3R 6773698 intron CR42721 + chr3R_14_6770001 chr3R_6770001 CanS-JC 1754 chr3R 6780425 6780481 chr3R 6780534 6780590 22 109 3.5 2.5 3.0 5.5 165 chr3R 6780425 intergenic not near genes chr3R 6780508 intergenic not near genes chr3R 6780590 intergenic not near genes chr3R_22_6780001 chr3R_6780001 CanS-JC 1755 chr3R 6782413 6782467 chr3R 6782518 6782572 19 105 5.5 8.5 7.0 2.4 159 chr3R 6782413 intergenic not near genes chr3R 6782492 intergenic not near genes chr3R 6782572 intergenic not near genes chr3R_19_6780001 chr3R_6780001 CanS-JC 1756 chr3R 6803744 6803750 chr3R 6803839 6803852 4 100 0.0 5.0 2.5 1.1 108 chr3R 6803744 intergenic not near genes chr3R 6803798 intergenic not near genes chr3R 6803852 intergenic not near genes chr3R_4_6800001 chr3R_6800001 CanS-JC 1757 chr3R 6807239 6807290 chr3R 6807347 6807398 5 108 2.0 3.0 2.5 1.4 159 chr3R 6807239 intergenic not near genes chr3R 6807318 intergenic not near genes chr3R 6807398 intergenic not near genes chr3R_5_6805001 chr3R_6805001 CanS-JC 1758 chr3R 6827998 6828036 chr3R 6828100 6828137 11 102 2.5 4.0 3.2 2.6 139 chr3R 6827998 intron Scr - chr3R 6828068 intron Scr - chr3R 6828137 intron Scr - chr3R_11_6825001 chr3R_6825001 CanS-JC 1759 chr3R 6856358 6856387 chr3R 6856501 6856520 5 140 5.0 4.5 4.8 0.9 162 chr3R 6856358 intergenic not near genes chr3R 6856439 intergenic not near genes chr3R 6856520 intergenic not near genes chr3R_5_6855001 chr3R_6855001 CanS-JC 1760 chr3R 6862200 6862248 chr3R 6862313 6862361 15 113 2.0 3.0 2.5 4.3 161 chr3R 6862200 intergenic not near genes chr3R 6862280 intergenic not near genes chr3R 6862361 intergenic not near genes chr3R_15_6860001 chr3R_6860001 CanS-JC 1761 chr3R 6923557 6923617 chr3R 6923670 6923728 14 112 4.0 2.5 3.2 3.3 171 chr3R 6923557 intron Antp - chr3R 6923642 intron Antp - chr3R 6923728 intron Antp - chr3R_14_6920001 chr3R_6920001 CanS-JC 1762 chr3R 6961163 6961190 chr3R 6961268 6961295 7 105 5.5 4.0 4.8 1.2 132 chr3R 6961163 intron Antp - chr3R 6961229 intron Antp - chr3R 6961295 intron Antp - chr3R_7_6960001 chr3R_6960001 CanS-JC 1763 chr3R 6961191 6961197 chr3R 6961266 6961301 5 99 4.5 4.0 4.2 1.0 110 chr3R 6961191 intron Antp - chr3R 6961246 intron Antp - chr3R 6961301 intron Antp - chr3R_5_6960001 chr3R_6960001 CanS-JC 1764 chr3R 6972196 6972244 chr3R 6972833 6972881 12 638 5.0 5.5 5.2 1.9 685 chr3R 6972196 intron Antp - chr3R 6972538 intron Antp - chr3R 6972881 intron Antp - chr3R_12_6970001 chr3R_6970001 CanS-JC 1765 chr3R 7012176 7012234 chr3R 7012280 7012338 15 104 4.5 6.0 5.2 2.4 162 chr3R 7012176 intergenic not near genes chr3R 7012257 intergenic not near genes chr3R 7012338 intergenic not near genes chr3R_15_7010001 chr3R_7010001 CanS-JC 1766 chr3R 7051096 7051151 chr3R 7051201 7051256 11 102 4.5 7.5 6.0 1.6 160 chr3R 7051096 intergenic not near genes chr3R 7051176 intergenic not near genes chr3R 7051256 intergenic not near genes chr3R_11_7050001 chr3R_7050001 CanS-JC 1767 chr3R 7095948 7095979 chr3R 7096059 7096066 7 108 10.0 4.0 7.0 0.9 118 chr3R 7095948 intergenic not near genes chr3R 7096007 intergenic not near genes chr3R 7096066 intergenic not near genes chr3R_7_7095001 chr3R_7095001 CanS-JC 1768 chr3R 7103904 7103950 chr3R 7104029 7104075 12 125 5.0 3.0 4.0 2.4 171 chr3R 7103904 intron Alh - chr3R 7103990 intron Alh - chr3R 7104075 intron Alh - chr3R_12_7100001 chr3R_7100001 CanS-JC 1769 chr3R 7106500 7106537 chr3R 7106607 7106644 13 107 1.0 2.5 1.8 4.6 144 chr3R 7106500 intron Alh - chr3R 7106572 intron Alh - chr3R 7106644 intron Alh - chr3R_13_7105001 chr3R_7105001 CanS-JC 1770 chr3R 7173655 7173707 chr3R 7173760 7173813 11 105 1.5 4.5 3.0 2.8 158 chr3R 7173655 intron sas + chr3R 7173734 intron sas + chr3R 7173813 intron sas + chr3R_11_7170001 chr3R_7170001 CanS-JC 1771 chr3R 7206854 7206888 chr3R 7206969 7207003 8 115 0.0 3.0 1.5 3.2 149 chr3R 7206854 intergenic not near genes chr3R 7206928 intergenic CG1288 - chr3R 7207003 intergenic CG1288 - chr3R_8_7205001 chr3R_7205001 CanS-JC 1772 chr3R 7206889 7206900 chr3R 7206964 7207015 5 107 0.0 2.5 1.2 2.3 126 chr3R 7206889 intergenic CG1288 - chr3R 7206952 intergenic CG1288 - chr3R 7207015 intergenic CG1288 - chr3R_5_7205001 chr3R_7205001 CanS-JC 1773 chr3R 7372971 7373023 chr3R 7373076 7373128 17 104 2.0 5.0 3.5 3.8 157 chr3R 7372971 intergenic not near genes chr3R 7373050 intergenic not near genes chr3R 7373128 intergenic not near genes chr3R_17_7370001 chr3R_7370001 CanS-JC 1774 chr3R 7385562 7385607 chr3R 7385664 7385709 19 101 6.0 7.5 6.8 2.4 147 chr3R 7385562 intergenic not near genes chr3R 7385636 intergenic not near genes chr3R 7385709 intergenic not near genes chr3R_19_7385001 chr3R_7385001 CanS-JC 1775 chr3R 7447965 7448000 chr3R 7448069 7448104 16 104 2.5 4.0 3.2 3.8 139 chr3R 7447965 intergenic not near genes chr3R 7448034 intergenic not near genes chr3R 7448104 intergenic not near genes chr3R_16_7445001 chr3R_7445001 CanS-JC 1776 chr3R 7464663 7464718 chr3R 7464775 7464830 17 112 3.0 4.0 3.5 3.8 167 chr3R 7464663 intergenic not near genes chr3R 7464746 intergenic not near genes chr3R 7464830 intergenic not near genes chr3R_17_7460001 chr3R_7460001 CanS-JC 1777 chr3R 7492579 7492624 chr3R 7492682 7492727 11 103 4.5 6.0 5.2 1.8 148 chr3R 7492579 intron alpha-Est10 - chr3R 7492653 intron alpha-Est10 - chr3R 7492727 intron alpha-Est10 - chr3R_11_7490001 chr3R_7490001 CanS-JC 1778 chr3R 7548578 7548633 chr3R 7548683 7548738 14 105 4.5 6.5 5.5 2.2 160 chr3R 7548578 intron alpha-Est1 - chr3R 7548658 intron alpha-Est1 - chr3R 7548738 intron alpha-Est1 - chr3R_14_7545001 chr3R_7545001 CanS-JC 1779 chr3R 7556926 7556963 chr3R 7557045 7557082 20 118 0.0 6.5 3.2 4.8 156 chr3R 7556926 intergenic not near genes chr3R 7557004 intergenic not near genes chr3R 7557082 intergenic not near genes chr3R_20_7555001 chr3R_7555001 CanS-JC 1780 chr3R 7621548 7621562 chr3R 7621664 7621678 7 116 4.5 11.0 7.8 0.8 130 chr3R 7621548 intron CG34127 - chr3R 7621613 intron CG34127 - chr3R 7621678 intron CG34127 - chr3R_7_7620001 chr3R_7620001 CanS-JC 1781 chr3R 7635627 7635683 chr3R 7635736 7635754 21 107 7.5 3.0 5.2 3.4 127 chr3R 7635627 intron CG34127 - chr3R 7635690 intron CG34127 - chr3R 7635754 intron CG34127 - chr3R_21_7635001 chr3R_7635001 CanS-JC 1782 chr3R 7677893 7677937 chr3R 7678032 7678076 8 138 2.5 3.5 3.0 2.0 183 chr3R 7677893 intron Nlg1 + chr3R 7677984 intron Nlg1 + chr3R 7678076 intron Nlg1 + chr3R_8_7675001 chr3R_7675001 CanS-JC 1783 chr3R 7694556 7694606 chr3R 7713643 7713693 invader3 20 19087 1.0 4.5 2.8 5.3 19137 chr3R 7694556 3` UTR Nlg1 + chr3R 7704124 intergenic not near genes chr3R 7713693 intergenic not near genes chr3R_20_7700001 chr3R_7700001 CanS-JC 1784 chr3R 7724421 7724472 chr3R 7724537 7724588 20 114 6.5 3.0 4.8 3.4 167 chr3R 7724421 3` UTR CG2616 + chr3R 7724504 3` UTR CG2616 + chr3R 7724588 3` UTR CG2616 + chr3R_20_7720001 chr3R_7720001 CanS-JC 1785 chr3R 7729444 7729493 chr3R 7737408 7737457 Stalker2 15 7964 4.5 2.5 3.5 3.3 8013 chr3R 7729444 intergenic not near genes chr3R 7733450 intergenic not near genes chr3R 7737457 intergenic not near genes chr3R_15_7730001 chr3R_7730001 CanS-JC 1786 chr3R 7830275 7830325 chr3R 7830452 7830502 13 176 7.0 2.5 4.8 2.2 227 chr3R 7830275 intron CG34384 + chr3R 7830388 intron CG34384 + chr3R 7830502 intron CG34384 + chr3R_13_7830001 chr3R_7830001 CanS-JC 1787 chr3R 7832734 7832747 chr3R 7832837 7832850 11 103 9.0 11.5 10.2 1.0 116 chr3R 7832734 intron CG34384 + chr3R 7832792 intron CG34384 + chr3R 7832850 intron CG34384 + chr3R_11_7830001 chr3R_7830001 CanS-JC 1788 chr3R 7849617 7849669 chr3R 7850810 7850862 1360 6 1193 2.5 4.0 3.2 1.4 1245 chr3R 7849617 intron CG34384 + chr3R 7850240 intron CG34384 + chr3R 7850862 intron CG34384 + chr3R_6_7850001 chr3R_7850001 CanS-JC 1789 chr3R 7857622 7857671 chr3R 7857731 7857780 16 109 5.0 2.5 3.8 3.3 158 chr3R 7857622 3` UTR CG17816 - chr3R 7857701 3` UTR CG17816 - chr3R 7857780 3` UTR CG17816 - chr3R_16_7855001 chr3R_7855001 CanS-JC 1790 chr3R 7883108 7883156 chr3R 7883212 7883260 12 104 8.5 4.0 6.2 1.7 152 chr3R 7883108 intron CG17816 - chr3R 7883184 intron CG17816 - chr3R 7883260 intron CG17816 - chr3R_12_7880001 chr3R_7880001 CanS-JC 1791 chr3R 7948420 7948469 chr3R 7948523 7948572 14 103 3.5 2.5 3.0 3.5 152 chr3R 7948420 intron dsx - chr3R 7948496 intron dsx - chr3R 7948572 intron dsx - chr3R_14_7945001 chr3R_7945001 CanS-JC 1792 chr3R 7955914 7955968 chr3R 7956017 7956069 19 101 2.0 6.0 4.0 3.8 155 chr3R 7955914 intron dsx - chr3R 7955992 intron dsx - chr3R 7956069 intron dsx - chr3R_19_7955001 chr3R_7955001 CanS-JC 1793 chr3R 7973298 7973336 chr3R 7974386 7974424 1360 11 1088 4.5 4.5 4.5 2.0 1126 chr3R 7973298 intergenic not near genes chr3R 7973861 intergenic not near genes chr3R 7974424 3` UTR CD98hc - chr3R_11_7970001 chr3R_7970001 CanS-JC 1794 chr3R 7981785 7981817 chr3R 7982201 7982233 10 416 2.0 5.5 3.8 2.1 448 chr3R 7981785 intergenic CG2781 - chr3R 7982009 3` UTR CG2781 - chr3R 7982233 3` UTR CG2781 - chr3R_10_7980001 chr3R_7980001 CanS-JC 1795 chr3R 8070885 8070927 chr3R 8070992 8071034 9 107 6.5 7.5 7.0 1.1 149 chr3R 8070885 intron mAChR-B + chr3R 8070960 intron mAChR-B + chr3R 8071034 intron mAChR-B + chr3R_9_8070001 chr3R_8070001 CanS-JC 1796 chr3R 8090255 8090291 chr3R 8090458 8090494 9 203 5.5 5.0 5.2 1.5 239 chr3R 8090255 5` UTR CR44330 + chr3R 8090374 intergenic CR44330 + chr3R 8090494 intergenic CR44330 + chr3R_9_8090001 chr3R_8090001 CanS-JC 1797 chr3R 8094386 8094435 chr3R 8099717 8099766 Transpac 16 5331 4.5 8.0 6.2 2.2 5380 chr3R 8094386 intron CG7900 + chr3R 8097076 intron CG7900 + chr3R 8099766 intron CG7900 + chr3R_16_8095001 chr3R_8095001 CanS-JC 1798 chr3R 8101736 8101788 chr3R 8104846 8104898 G2 19 3107 3.5 3.5 3.5 4.2 3162 chr3R 8101736 exon CG7900 + chr3R 8103317 intron CG7900 + chr3R 8104898 3` UTR CG7900 + chr3R_19_8100001 chr3R_8100001 CanS-JC 1799 chr3R 8146069 8146117 chr3R 8146179 8146227 9 109 9.5 1.0 5.2 1.5 158 chr3R 8146069 intergenic not near genes chr3R 8146148 intergenic not near genes chr3R 8146227 intergenic not near genes chr3R_9_8145001 chr3R_8145001 CanS-JC 1800 chr3R 8207548 8207581 chr3R 8208419 8208442 F-element 14 870 5.5 7.5 6.5 1.9 894 chr3R 8207548 intergenic not near genes chr3R 8207995 intergenic not near genes chr3R 8208442 intergenic not near genes chr3R_14_8205001 chr3R_8205001 CanS-JC 1801 chr3R 8247871 8247923 chr3R 8247979 8248031 14 108 5.0 3.5 4.2 2.7 160 chr3R 8247871 3` UTR,3` UTR CG18749 +,CG33722 + chr3R 8247951 intron,intron CG18749 +,CG33722 + chr3R 8248031 3` UTR,3` UTR CG18749 +,CG33722 + chr3R_14_8245001 chr3R_8245001 CanS-JC 1802 chr3R 8339246 8339247 chr3R 21907534 21907536 7 13568289 18.5 24.5 21.5 0.3 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_7_15120001 chr3R_15120001 CanS-JC 1803 chr3R 8393556 8393596 chr3R 8393666 8393706 17 108 7.5 3.5 5.5 2.6 150 chr3R 8393556 intron CG45263 - chr3R 8393631 intron CG45263 - chr3R 8393706 intron CG45263 - chr3R_17_8390001 chr3R_8390001 CanS-JC 1804 chr3R 8400126 8400171 chr3R 8400393 8400438 16 266 3.5 7.0 5.2 2.6 312 chr3R 8400126 intron CG45263 - chr3R 8400282 intron CG45263 - chr3R 8400438 intron CG45263 - chr3R_16_8400001 chr3R_8400001 CanS-JC 1805 chr3R 8402987 8403036 chr3R 8412179 8412228 roo 16 9192 4.0 1.0 2.5 4.6 9241 chr3R 8402987 intron CG45263 - chr3R 8407608 intron CG45263 - chr3R 8412228 intron CG45263 - chr3R_16_8405001 chr3R_8405001 CanS-JC 1806 chr3R 8500792 8500832 chr3R 8500933 8500973 12 141 3.5 3.0 3.2 2.9 181 chr3R 8500792 intergenic not near genes chr3R 8500882 intergenic not near genes chr3R 8500973 intergenic not near genes chr3R_12_8500001 chr3R_8500001 CanS-JC 1807 chr3R 8554780 8554795 chr3R 8554889 8554895 6 107 3.0 3.0 3.0 1.5 115 chr3R 8554780 intergenic not near genes chr3R 8554838 intergenic not near genes chr3R 8554895 intergenic not near genes chr3R_6_8550001 chr3R_8550001 CanS-JC 1808 chr3R 8570462 8570506 chr3R 8575124 8575168 HMS-Beagle 18 4661 2.0 9.0 5.5 2.8 4706 chr3R 8570462 intergenic not near genes chr3R 8572815 intergenic not near genes chr3R 8575168 intergenic not near genes chr3R_18_8570001 chr3R_8570001 CanS-JC 1809 chr3R 8601753 8601796 chr3R 8610932 8610975 roo 22 9179 7.5 6.0 6.8 2.8 9222 chr3R 8601753 intron 5-HT2B + chr3R 8606364 intron 5-HT2B + chr3R 8610975 intron 5-HT2B + chr3R_22_8605001 chr3R_8605001 CanS-JC 1810 chr3R 8702519 8702572 chr3R 8702826 8702879 22 308 30.0 29.5 29.8 0.7 360 chr3R 8702519 intergenic not near genes chr3R 8702699 intergenic not near genes chr3R 8702879 intergenic not near genes chr3R_22_8700001 chr3R_8700001 CanS-JC 1811 chr3R 8798626 8798679 chr3R 8798735 8798788 9 109 5.0 5.0 5.0 1.5 162 chr3R 8798626 intron,intron Pif1A -,Pif1B - chr3R 8798707 intron,intron Pif1A -,Pif1B - chr3R 8798788 intron,intron Pif1A -,Pif1B - chr3R_9_8795001 chr3R_8795001 CanS-JC 1812 chr3R 8894884 8894903 chr3R 8896028 8896047 1360 11 1144 10.0 7.0 8.5 1.2 1163 chr3R 8894884 intron pyd - chr3R 8895466 intron pyd - chr3R 8896047 intron pyd - chr3R_11_8895001 chr3R_8895001 CanS-JC 1813 chr3R 8917865 8917911 chr3R 8917971 8918017 14 106 3.0 2.0 2.5 4.0 152 chr3R 8917865 intron pyd - chr3R 8917941 intron pyd - chr3R 8918017 intron pyd - chr3R_14_8915001 chr3R_8915001 CanS-JC 1814 chr3R 8974608 8974666 chr3R 8974715 8974773 9 107 2.5 4.5 3.5 2.0 165 chr3R 8974608 intergenic not near genes chr3R 8974690 intergenic not near genes chr3R 8974773 intergenic not near genes chr3R_9_8970001 chr3R_8970001 CanS-JC 1815 chr3R 9036687 9036746 chr3R 9036809 9036868 20 122 4.0 1.5 2.8 5.3 181 chr3R 9036687 intron neur - chr3R 9036778 intron neur - chr3R 9036868 intron neur - chr3R_20_9035001 chr3R_9035001 CanS-JC 1816 chr3R 9101816 9101850 chr3R 9101939 9101974 9 124 5.5 4.0 4.8 1.6 158 chr3R 9101816 intron pum - chr3R 9101895 intron pum - chr3R 9101974 intron pum - chr3R_9_9100001 chr3R_9100001 CanS-JC 1817 chr3R 9108840 9108878 chr3R 9108942 9108980 9 102 2.5 6.0 4.2 1.7 140 chr3R 9108840 intron pum - chr3R 9108910 intron pum - chr3R 9108980 intron pum - chr3R_9_9105001 chr3R_9105001 CanS-JC 1818 chr3R 9141115 9141169 chr3R 9141225 9141279 13 110 2.5 8.0 5.2 2.1 164 chr3R 9141115 intron pum - chr3R 9141197 intron pum - chr3R 9141279 intron pum - chr3R_13_9140001 chr3R_9140001 CanS-JC 1819 chr3R 9167491 9167528 chr3R 9168072 9168109 9 581 5.5 5.5 5.5 1.4 618 chr3R 9167491 intron pum - chr3R 9167800 intron pum - chr3R 9168109 intron pum - chr3R_9_9165001 chr3R_9165001 CanS-JC 1820 chr3R 9278766 9278817 chr3R 9284042 9284130 Rt1a 7 5288 6.5 0.0 3.2 1.7 5364 chr3R 9278766 intergenic not near genes chr3R 9281448 intergenic not near genes chr3R 9284130 intergenic not near genes chr3R_7_9280001 chr3R_9280001 CanS-JC 1821 chr3R 9284034 9284079 chr3R 9284140 9284185 17 105 0.0 2.0 1.0 8.5 151 chr3R 9284034 intergenic not near genes chr3R 9284110 intergenic not near genes chr3R 9284185 intergenic not near genes chr3R_17_9280001 chr3R_9280001 CanS-JC 1822 chr3R 9304507 9304514 chr3R 9311820 9311827 Stalker4 6 7313 15.5 1.5 8.5 0.6 7320 chr3R 9304507 intron CG8861 - chr3R 9308167 intron CG8861 - chr3R 9311827 intron CG8861 - chr3R_6_9305001 chr3R_9305001 CanS-JC 1823 chr3R 9319557 9319597 chr3R 9320018 9320058 jockey 10 461 8.0 8.5 8.2 1.1 501 chr3R 9319557 intron CG8861 - chr3R 9319808 intron CG8861 - chr3R 9320058 intron CG8861 - chr3R_10_9315001 chr3R_9315001 CanS-JC 1824 chr3R 9361810 9361833 chr3R 9362077 9362097 pogo 8 266 2.0 5.5 3.8 1.7 287 chr3R 9361810 3` UTR CG45050 + chr3R 9361954 3` UTR CG45050 + chr3R 9362097 3` UTR CG45050 + chr3R_8_9360001 chr3R_9360001 CanS-JC 1825 chr3R 9362953 9363005 chr3R 9363068 9363120 10 115 0.5 4.0 2.2 3.1 167 chr3R 9362953 3` UTR CG45050 + chr3R 9363036 intergenic CG45050 +,CG18473 + chr3R 9363120 intergenic CG45050 +,CG18473 + chr3R_10_9360001 chr3R_9360001 CanS-JC 1826 chr3R 9379156 9379173 chr3R 9379264 9379281 9 108 0.0 8.0 4.0 1.8 125 chr3R 9379156 intron FER - chr3R 9379218 intron FER - chr3R 9379281 intron FER - chr3R_9_9375001 chr3R_9375001 CanS-JC 1827 chr3R 9382794 9382848 chr3R 9382945 9382999 18 151 3.5 7.0 5.2 2.9 205 chr3R 9382794 intron FER - chr3R 9382896 intron FER - chr3R 9382999 intron FER - chr3R_18_9380001 chr3R_9380001 CanS-JC 1828 chr3R 9425387 9425427 chr3R 9425492 9425532 9 105 5.0 7.0 6.0 1.3 145 chr3R 9425387 intron ps + chr3R 9425460 intron ps + chr3R 9425532 intron ps + chr3R_9_9425001 chr3R_9425001 CanS-JC 1829 chr3R 9599784 9599833 chr3R 9599984 9600025 11 199 6.0 5.5 5.8 1.6 241 chr3R 9599784 intron CG8312 + chr3R 9599904 intron CG8312 + chr3R 9600025 intron CG8312 + chr3R_11_9595001 chr3R_9595001 CanS-JC 1830 chr3R 9644556 9644605 chr3R 9644663 9644712 16 107 4.0 2.5 3.2 3.8 156 chr3R 9644556 intron Dh44 + chr3R 9644634 intron Dh44 + chr3R 9644712 intron Dh44 + chr3R_16_9640001 chr3R_9640001 CanS-JC 1831 chr3R 9702239 9702294 chr3R 9702341 9702396 27 101 5.0 4.5 4.8 4.7 157 chr3R 9702239 intron Unc-115a - chr3R 9702318 intron Unc-115a - chr3R 9702396 intron Unc-115a - chr3R_27_9700001 chr3R_9700001 CanS-JC 1832 chr3R 9898763 9898815 chr3R 9898881 9898933 14 117 4.5 5.5 5.0 2.3 170 chr3R 9898763 intron Glut4EF + chr3R 9898848 intron Glut4EF + chr3R 9898933 intron Glut4EF + chr3R_14_9895001 chr3R_9895001 CanS-JC 1833 chr3R 9942525 9942557 chr3R 9942865 9942896 14 340 3.0 3.5 3.2 3.3 371 chr3R 9942525 intron Glut4EF + chr3R 9942710 intron Glut4EF + chr3R 9942896 intron Glut4EF + chr3R_14_9940001 chr3R_9940001 CanS-JC 1834 chr3R 10073759 10073798 chr3R 10073894 10073933 7 135 5.5 4.0 4.8 1.2 174 chr3R 10073759 3` UTR nerfin-2 + chr3R 10073846 3` UTR CG5361 - chr3R 10073933 exon CG5361 - chr3R_7_10070001 chr3R_10070001 CanS-JC 1835 chr3R 10183075 10183106 chr3R 10183178 10183209 13 103 5.5 1.0 3.2 3.1 134 chr3R 10183075 intron CG12814 - chr3R 10183142 intron CG12814 - chr3R 10183209 intron CG12814 - chr3R_13_10180001 chr3R_10180001 CanS-JC 1836 chr3R 10231765 10231813 chr3R 10237368 10237416 mdg3 9 5603 2.5 7.5 5.0 1.5 5651 chr3R 10231765 intron CG42795 + chr3R 10234590 intron CG42795 + chr3R 10237416 intron CG42795 + chr3R_9_10230001 chr3R_10230001 CanS-JC 1837 chr3R 10255359 10255381 chr3R 10260825 10260847 I-element 10 5466 10.5 4.0 7.2 1.2 5488 chr3R 10255359 3` UTR Sirt6 - chr3R 10258103 intron Sirt6 - chr3R 10260847 exon Sirt6 - chr3R_10_10255001 chr3R_10255001 CanS-JC 1838 chr3R 10275558 10275584 chr3R 10275661 10275687 11 103 5.0 9.0 7.0 1.4 129 chr3R 10275558 intron CG43143 + chr3R 10275622 intron CG43143 + chr3R 10275687 intron CG43143 + chr3R_11_10275001 chr3R_10275001 CanS-JC 1839 chr3R 10306955 10307012 chr3R 10312188 10312245 20 5234 32.5 21.5 27.0 0.7 5290 chr3R 10306955 exon CG43143 + chr3R 10309600 exon CG6293 - chr3R 10312245 3` UTR Bruce - chr3R_20_10305001 chr3R_10305001 CanS-JC 1840 chr3R 10403004 10403062 chr3R 10403111 10403169 12 107 2.5 2.5 2.5 3.4 165 chr3R 10403004 3` UTR CG6325 - chr3R 10403086 3` UTR CG6325 - chr3R 10403169 3` UTR CG6325 - chr3R_12_10400001 chr3R_10400001 CanS-JC 1841 chr3R 10434441 10434479 chr3R 10434623 10434661 8 182 5.0 2.0 3.5 1.8 220 chr3R 10434441 intergenic Cyp12e1 + chr3R 10434551 intergenic Cyp12e1 + chr3R 10434661 intergenic Cyp12e1 + chr3R_8_10430001 chr3R_10430001 CanS-JC 1842 chr3R 10481719 10481770 chr3R 10481827 10481878 19 108 3.0 2.0 2.5 5.4 159 chr3R 10481719 intergenic not near genes chr3R 10481798 intergenic not near genes chr3R 10481878 intergenic not near genes chr3R_19_10480001 chr3R_10480001 CanS-JC 1843 chr3R 10531845 10531890 chr3R 10531952 10531997 22 106 6.0 0.0 3.0 5.5 152 chr3R 10531845 intron hth - chr3R 10531921 intron hth - chr3R 10531997 intron hth - chr3R_22_10530001 chr3R_10530001 CanS-JC 1844 chr3R 10535321 10535339 chr3R 10535440 10535458 4 119 4.5 0.0 2.2 1.2 137 chr3R 10535321 intron hth - chr3R 10535390 intron hth - chr3R 10535458 intron hth - chr3R_4_10535001 chr3R_10535001 CanS-JC 1845 chr3R 10596618 10596649 chr3R 10596720 10596749 9 101 5.5 5.0 5.2 1.5 131 chr3R 10596618 intron hth - chr3R 10596684 intron hth - chr3R 10596749 intron hth - chr3R_9_10595001 chr3R_10595001 CanS-JC 1846 chr3R 10651782 10651841 chr3R 10651907 10651942 18 123 1.5 5.0 3.2 4.3 160 chr3R 10651782 intergenic not near genes chr3R 10651862 intergenic not near genes chr3R 10651942 intergenic not near genes chr3R_18_10650001 chr3R_10650001 CanS-JC 1847 chr3R 10671516 10671566 chr3R 10671639 10671689 17 121 8.0 4.0 6.0 2.4 173 chr3R 10671516 intergenic not near genes chr3R 10671602 intergenic not near genes chr3R 10671689 intergenic not near genes chr3R_17_10670001 chr3R_10670001 CanS-JC 1848 chr3R 10681967 10681974 chr3R 10682098 10682105 5 130 9.5 0.0 4.8 0.9 138 chr3R 10681967 intergenic not near genes chr3R 10682036 intergenic not near genes chr3R 10682105 intergenic not near genes chr3R_5_10680001 chr3R_10680001 CanS-JC 1849 chr3R 10732820 10732867 chr3R 10732931 10732978 14 111 4.0 6.5 5.2 2.3 158 chr3R 10732820 intergenic not near genes chr3R 10732899 intergenic not near genes chr3R 10732978 intergenic not near genes chr3R_14_10730001 chr3R_10730001 CanS-JC 1850 chr3R 10749066 10749123 chr3R 10749411 10749468 23 345 4.0 4.0 4.0 4.6 402 chr3R 10749066 intron TkR86C - chr3R 10749267 intron TkR86C - chr3R 10749468 intron TkR86C - chr3R_23_10745001 chr3R_10745001 CanS-JC 1851 chr3R 10799753 10799759 chr3R 10799997 10800003 5 244 3.5 2.0 2.8 1.3 250 chr3R 10799753 exon CG14692 - chr3R 10799878 exon CG14692 - chr3R 10800003 intron CG14692 - chr3R_5_10795001 chr3R_10795001 CanS-JC 1852 chr3R 10804148 10804200 chr3R 10811706 10811758 17.6 8 7558 3.5 6.5 5.0 1.3 7610 chr3R 10804148 intergenic CG14692 - chr3R 10807953 intergenic not near genes chr3R 10811758 3` UTR CG14693 - chr3R_8_10805001 chr3R_10805001 CanS-JC 1853 chr3R 10817196 10817246 chr3R 10817305 10817355 16 109 4.5 6.5 5.5 2.5 159 chr3R 10817196 3` UTR CG4089 + chr3R 10817276 3` UTR CG4089 + chr3R 10817355 3` UTR CG4089 + chr3R_16_10815001 chr3R_10815001 CanS-JC 1854 chr3R 10868568 10868624 chr3R 10868672 10868728 19 103 4.5 3.5 4.0 3.8 160 chr3R 10868568 5` UTR SelR - chr3R 10868648 intergenic SelR -,Tsp86D + chr3R 10868728 5` UTR Tsp86D + chr3R_19_10865001 chr3R_10865001 CanS-JC 1855 chr3R 10870842 10870897 chr3R 10870949 10871004 14 107 6.0 4.5 5.2 2.3 162 chr3R 10870842 intergenic Fdh -,Tsp86D + chr3R 10870923 3` UTR Fdh - chr3R 10871004 exon Fdh - chr3R_14_10870001 chr3R_10870001 CanS-JC 1856 chr3R 10900427 10900463 chr3R 10900529 10900566 10 102 4.0 7.0 5.5 1.5 139 chr3R 10900427 intergenic not near genes chr3R 10900496 intergenic not near genes chr3R 10900566 intergenic not near genes chr3R_10_10900001 chr3R_10900001 CanS-JC 1857 chr3R 10924717 10924774 chr3R 10924834 10924891 21 117 6.0 2.5 4.2 4.0 174 chr3R 10924717 intergenic not near genes chr3R 10924804 intergenic not near genes chr3R 10924891 intergenic not near genes chr3R_21_10920001 chr3R_10920001 CanS-JC 1858 chr3R 10963536 10963588 chr3R 10963656 10963708 18 120 3.5 4.5 4.0 3.6 172 chr3R 10963536 intergenic not near genes chr3R 10963622 intergenic not near genes chr3R 10963708 intergenic not near genes chr3R_18_10960001 chr3R_10960001 CanS-JC 1859 chr3R 11032834 11032879 chr3R 11033113 11033158 11 279 5.0 1.5 3.2 2.6 324 chr3R 11032834 intron CG34114 + chr3R 11032996 intron CG34114 + chr3R 11033158 intron CG34114 + chr3R_11_11030001 chr3R_11030001 CanS-JC 1860 chr3R 11102671 11102712 chr3R 11102786 11102827 12 114 5.0 8.0 6.5 1.6 156 chr3R 11102671 intergenic not near genes chr3R 11102749 intergenic not near genes chr3R 11102827 intergenic not near genes chr3R_12_11100001 chr3R_11100001 CanS-JC 1861 chr3R 11197958 11198008 chr3R 11198083 11198133 15 125 3.0 4.5 3.8 3.1 175 chr3R 11197958 intron cu + chr3R 11198046 intron cu + chr3R 11198133 intron cu + chr3R_15_11195001 chr3R_11195001 CanS-JC 1862 chr3R 11247220 11247228 chr3R 11247327 11247330 INE-1 4 106 8.0 2.5 5.2 0.6 110 chr3R 11247220 intergenic CG5214 +,CR43283 - chr3R 11247275 intergenic CR43283 -,CG5214 + chr3R 11247330 intergenic CR43283 -,CG5214 + chr3R_4_11245001 chr3R_11245001 CanS-JC 1863 chr3R 11265910 11265920 chr3R 11266020 11266030 4 110 10.0 11.0 10.5 0.3 120 chr3R 11265910 intergenic not near genes chr3R 11265970 intergenic not near genes chr3R 11266030 intergenic not near genes chr3R_4_11265001 chr3R_11265001 CanS-JC 1864 chr3R 11379209 11379247 chr3R 11388390 11388428 roo 14 9181 12.0 5.0 8.5 1.5 9219 chr3R 11379209 intron pros + chr3R 11383818 intron pros + chr3R 11388428 intron pros + chr3R_14_11380001 chr3R_11380001 CanS-JC 1865 chr3R 11442322 11442367 chr3R 11442532 11442578 16 211 4.5 3.0 3.8 3.3 256 chr3R 11442322 intron,intron sals -,CG17230 + chr3R 11442450 intron,intron sals -,CG17230 + chr3R 11442578 intron,intron sals -,CG17230 + chr3R_16_11440001 chr3R_11440001 CanS-JC 1866 chr3R 11476351 11476395 chr3R 11476465 11476501 10 113 4.0 6.0 5.0 1.7 150 chr3R 11476351 intergenic not near genes chr3R 11476426 intergenic not near genes chr3R 11476501 intergenic not near genes chr3R_10_11475001 chr3R_11475001 CanS-JC 1867 chr3R 11562481 11562523 chr3R 11562778 11562820 13 296 2.0 3.5 2.8 3.4 339 chr3R 11562481 intron,intron fabp -,sea - chr3R 11562650 intron,intron fabp -,sea - chr3R 11562820 intron,intron fabp -,sea - chr3R_13_11560001 chr3R_11560001 CanS-JC 1868 chr3R 11664887 11664931 chr3R 11665155 11665196 9 268 4.0 6.5 5.2 1.5 309 chr3R 11664887 intron CG42327 + chr3R 11665042 intron CG42327 + chr3R 11665196 intron CG42327 + chr3R_9_11665001 chr3R_11665001 CanS-JC 1869 chr3R 11694704 11694740 chr3R 11694823 11694859 10 118 2.5 0.0 1.2 4.5 155 chr3R 11694704 intergenic Fer3 - chr3R 11694782 intergenic Fer3 - chr3R 11694859 intergenic not near genes chr3R_10_11690001 chr3R_11690001 CanS-JC 1870 chr3R 11724423 11724462 chr3R 11724857 11724896 7 434 3.5 5.5 4.5 1.3 473 chr3R 11724423 intron CG12594 + chr3R 11724660 intron CG12594 + chr3R 11724896 intron CG12594 + chr3R_7_11720001 chr3R_11720001 CanS-JC 1871 chr3R 11741411 11741464 chr3R 11741514 11741567 18 103 4.0 3.5 3.8 3.8 156 chr3R 11741411 exon Blm - chr3R 11741489 exon Blm - chr3R 11741567 exon Blm - chr3R_18_11740001 chr3R_11740001 CanS-JC 1872 chr3R 11749192 11749242 chr3R 11749304 11749354 20 110 4.0 5.0 4.5 3.6 162 chr3R 11749192 intron CG6923 - chr3R 11749273 intron CG6923 - chr3R 11749354 intron CG6923 - chr3R_20_11745001 chr3R_11745001 CanS-JC 1873 chr3R 11830326 11830358 chr3R 11830436 11830468 9 110 2.5 2.5 2.5 2.6 142 chr3R 11830326 intron CG6959 - chr3R 11830397 intron CG6959 - chr3R 11830468 intron CG6959 - chr3R_9_11830001 chr3R_11830001 CanS-JC 1874 chr3R 11841041 11841090 chr3R 11846258 11846307 BS 12 5217 4.0 6.5 5.2 1.9 5266 chr3R 11841041 intron CG6959 - chr3R 11843674 intron CG6959 - chr3R 11846307 intron CG6959 - chr3R_12_11840001 chr3R_11840001 CanS-JC 1875 chr3R 12080839 12080897 chr3R 12080942 12081000 12 101 3.5 3.0 3.2 2.9 161 chr3R 12080839 intron CG14741 - chr3R 12080920 intron CG14741 - chr3R 12081000 intron CG14741 - chr3R_12_12080001 chr3R_12080001 CanS-JC 1876 chr3R 12097217 12097271 chr3R 12097347 12097401 8 130 8.5 5.5 7.0 1.0 184 chr3R 12097217 intron dpr17 + chr3R 12097309 intron dpr17 + chr3R 12097401 intron dpr17 + chr3R_8_12095001 chr3R_12095001 CanS-JC 1877 chr3R 12307447 12307493 chr3R 12307574 12307620 12 127 2.5 1.5 2.0 4.0 173 chr3R 12307447 intergenic not near genes chr3R 12307534 intergenic not near genes chr3R 12307620 intergenic not near genes chr3R_12_12305001 chr3R_12305001 CanS-JC 1878 chr3R 12358877 12358924 chr3R 12358982 12359029 12 103 3.5 10.0 6.8 1.5 152 chr3R 12358877 intergenic not near genes chr3R 12358953 intergenic not near genes chr3R 12359029 intergenic not near genes chr3R_12_12355001 chr3R_12355001 CanS-JC 1879 chr3R 12392870 12392898 chr3R 12392996 12393024 9 126 4.5 10.5 7.5 1.1 154 chr3R 12392870 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12392947 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393024 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_9_12390001 chr3R_12390001 CanS-JC 1880 chr3R 12459739 12459776 chr3R 12459861 12459898 12 122 8.0 6.5 7.2 1.5 159 chr3R 12459739 exon CG5961 - chr3R 12459818 exon CG5961 - chr3R 12459898 5` UTR CG5961 - chr3R_12_12455001 chr3R_12455001 CanS-JC 1881 chr3R 12462410 12462445 chr3R 12462532 12462567 11 120 3.0 7.5 5.2 1.8 157 chr3R 12462410 3` UTR CG12267 + chr3R 12462488 intergenic CG12267 +,CG5608 - chr3R 12462567 3` UTR CG5608 - chr3R_11_12460001 chr3R_12460001 CanS-JC 1882 chr3R 12553491 12553539 chr3R 12553605 12553650 5 113 1.5 6.0 3.8 1.0 159 chr3R 12553491 intron Octbeta2R - chr3R 12553570 intron Octbeta2R - chr3R 12553650 intron Octbeta2R - chr3R_5_12550001 chr3R_12550001 CanS-JC 1883 chr3R 12598978 12599030 chr3R 12599144 12599196 11 166 1.5 3.5 2.5 3.1 218 chr3R 12598978 intergenic not near genes chr3R 12599087 intergenic not near genes chr3R 12599196 intergenic not near genes chr3R_11_12595001 chr3R_12595001 CanS-JC 1884 chr3R 12666739 12666795 chr3R 12666892 12666948 22 153 6.0 5.0 5.5 3.4 209 chr3R 12666739 intron CG14395 + chr3R 12666844 intron CG14395 + chr3R 12666948 intron CG14395 + chr3R_22_12665001 chr3R_12665001 CanS-JC 1885 chr3R 12694285 12694335 chr3R 12694388 12694438 11 103 9.5 10.5 10.0 1.0 153 chr3R 12694285 3` UTR CG14391 - chr3R 12694362 exon CG14391 - chr3R 12694438 exon CG14391 - chr3R_11_12690001 chr3R_12690001 CanS-JC 1886 chr3R 12720646 12720697 chr3R 12720748 12720799 10 97 3.0 0.5 1.8 3.6 153 chr3R 12720646 intron Men - chr3R 12720722 intron Men - chr3R 12720799 intron Men - chr3R_10_12720001 chr3R_12720001 CanS-JC 1887 chr3R 12733458 12733506 chr3R 12733561 12733609 27 103 4.0 4.0 4.0 5.4 151 chr3R 12733458 intergenic not near genes chr3R 12733534 intergenic not near genes chr3R 12733609 intergenic not near genes chr3R_27_12730001 chr3R_12730001 CanS-JC 1888 chr3R 12763084 12763147 chr3R 12763198 12763250 8 104 0.0 2.0 1.0 4.0 166 chr3R 12763084 intron beat-Vc - chr3R 12763167 intron beat-Vc - chr3R 12763250 intron beat-Vc - chr3R_8_12760001 chr3R_12760001 CanS-JC 1889 chr3R 12766053 12766102 chr3R 12766203 12766252 12 150 2.5 1.0 1.8 4.3 199 chr3R 12766053 intron beat-Vc - chr3R 12766152 intron beat-Vc - chr3R 12766252 intron beat-Vc - chr3R_12_12765001 chr3R_12765001 CanS-JC 1890 chr3R 12780268 12780303 chr3R 12780407 12780442 BS 13 139 3.5 5.0 4.2 2.5 174 chr3R 12780268 intron beat-Vc - chr3R 12780355 intron beat-Vc - chr3R 12780442 intron beat-Vc - chr3R_13_12780001 chr3R_12780001 CanS-JC 1891 chr3R 12786428 12786470 chr3R 12786814 12786854 6 384 2.0 2.5 2.2 1.9 426 chr3R 12786428 intergenic not near genes chr3R 12786641 intergenic not near genes chr3R 12786854 intergenic not near genes chr3R_6_12785001 chr3R_12785001 CanS-JC 1892 chr3R 12819002 12819032 chr3R 12819111 12819141 11 109 9.5 1.5 5.5 1.7 139 chr3R 12819002 intergenic not near genes chr3R 12819072 intergenic not near genes chr3R 12819141 intergenic not near genes chr3R_11_12815001 chr3R_12815001 CanS-JC 1893 chr3R 12850268 12850323 chr3R 12850411 12850466 16 143 5.5 5.5 5.5 2.5 198 chr3R 12850268 intergenic CR44234 - chr3R 12850367 intergenic CR44234 - chr3R 12850466 3` UTR CR44234 - chr3R_16_12850001 chr3R_12850001 CanS-JC 1894 chr3R 12858717 12858771 chr3R 12858824 12858878 12 105 2.0 3.5 2.8 3.2 161 chr3R 12858717 intron CG10126 - chr3R 12858798 intron CG10126 - chr3R 12858878 intron CG10126 - chr3R_12_12855001 chr3R_12855001 CanS-JC 1895 chr3R 12866466 12866517 chr3R 12866643 12866694 18 176 5.0 1.0 3.0 4.5 228 chr3R 12866466 intergenic not near genes chr3R 12866580 intergenic not near genes chr3R 12866694 intergenic not near genes chr3R_18_12865001 chr3R_12865001 CanS-JC 1896 chr3R 12876935 12876983 chr3R 12877044 12877092 11 109 6.0 2.5 4.2 2.1 157 chr3R 12876935 intergenic not near genes chr3R 12877014 intergenic not near genes chr3R 12877092 intergenic not near genes chr3R_11_12875001 chr3R_12875001 CanS-JC 1897 chr3R 12880093 12880146 chr3R 12880195 12880246 20 101 1.5 3.5 2.5 5.7 153 chr3R 12880093 intergenic not near genes chr3R 12880170 intergenic not near genes chr3R 12880246 intergenic not near genes chr3R_20_12880001 chr3R_12880001 CanS-JC 1898 chr3R 12894581 12894620 chr3R 12894720 12894759 4 139 0.0 0.0 0.0 4.0 178 chr3R 12894581 intergenic not near genes chr3R 12894670 intergenic not near genes chr3R 12894759 intergenic not near genes chr3R_4_12890001 chr3R_12890001 CanS-JC 1899 chr3R 12920133 12920180 chr3R 12925362 12925409 copia 18 5229 7.0 5.0 6.0 2.6 5276 chr3R 12920133 intron beat-Vb + chr3R 12922771 intron beat-Vb + chr3R 12925409 intron beat-Vb + chr3R_18_12920001 chr3R_12920001 CanS-JC 1900 chr3R 13059940 13059976 chr3R 13060161 13060197 9 221 2.0 5.5 3.8 1.9 257 chr3R 13059940 intron sim + chr3R 13060068 intron sim + chr3R 13060197 intron sim + chr3R_9_13060001 chr3R_13060001 CanS-JC 1901 chr3R 13066978 13067007 chr3R 13067091 13067120 10 113 5.0 3.5 4.2 1.9 142 chr3R 13066978 intron sim + chr3R 13067049 intron sim + chr3R 13067120 intron sim + chr3R_10_13065001 chr3R_13065001 CanS-JC 1902 chr3R 13073953 13073999 chr3R 13074058 13074104 7 105 1.5 5.5 3.5 1.6 151 chr3R 13073953 intron sim + chr3R 13074028 intron sim + chr3R 13074104 exon sim + chr3R_7_13070001 chr3R_13070001 CanS-JC 1903 chr3R 13075332 13075371 chr3R 13075439 13075477 15 106 4.0 5.5 4.8 2.6 145 chr3R 13075332 intron sim + chr3R 13075404 intron sim + chr3R 13075477 intron sim + chr3R_15_13075001 chr3R_13075001 CanS-JC 1904 chr3R 13120747 13120801 chr3R 13120849 13120904 17 103 4.5 4.0 4.2 3.3 157 chr3R 13120747 intron timeout + chr3R 13120826 intron timeout + chr3R 13120904 intron timeout + chr3R_17_13120001 chr3R_13120001 CanS-JC 1905 chr3R 13135803 13135853 chr3R 13138004 13138054 pogo 15 2201 4.0 3.0 3.5 3.3 2251 chr3R 13135803 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136928 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138054 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_15_13135001 chr3R_13135001 CanS-JC 1906 chr3R 13143016 13143066 chr3R 13148616 13148642 mdg3 12 5598 4.5 4.0 4.2 2.3 5626 chr3R 13143016 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145829 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148642 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_12_13145001 chr3R_13145001 CanS-JC 1907 chr3R 13195927 13195983 chr3R 13196048 13196104 12 121 5.0 2.0 3.5 2.7 177 chr3R 13195927 intergenic not near genes chr3R 13196016 intergenic not near genes chr3R 13196104 intergenic not near genes chr3R_12_13195001 chr3R_13195001 CanS-JC 1908 chr3R 13311607 13311642 chr3R 13318884 13318919 Doc 9 7277 23.0 6.0 14.5 0.6 7312 chr3R 13311607 exon CG32473 + chr3R 13315263 intergenic not near genes chr3R 13318919 intergenic CG45080 - chr3R_9_13315001 chr3R_13315001 CanS-JC 1909 chr3R 13348994 13349031 chr3R 13349096 13349133 10 102 7.0 7.0 7.0 1.2 139 chr3R 13348994 intergenic not near genes chr3R 13349064 intergenic not near genes chr3R 13349133 intergenic not near genes chr3R_10_13345001 chr3R_13345001 CanS-JC 1910 chr3R 13387301 13387356 chr3R 13387443 13387498 32 138 28.0 32.5 30.2 1.0 197 chr3R 13387301 exon CG9799 - chr3R 13387400 intron CG9799 - chr3R 13387498 exon CG9799 - chr3R_32_13385001 chr3R_13385001 CanS-JC 1911 chr3R 13418638 13418682 chr3R 13418740 13418784 8 102 4.0 2.5 3.2 1.9 146 chr3R 13418638 intergenic not near genes chr3R 13418711 intergenic not near genes chr3R 13418784 intergenic not near genes chr3R_8_13415001 chr3R_13415001 CanS-JC 1912 chr3R 13435361 13435421 chr3R 13435562 13435622 28 201 1.5 3.5 2.5 8.0 261 chr3R 13435361 intergenic yrt - chr3R 13435492 intergenic not near genes chr3R 13435622 intergenic not near genes chr3R_28_13435001 chr3R_13435001 CanS-JC 1913 chr3R 13439559 13439587 chr3R 13439667 13439695 10 108 4.5 1.0 2.8 2.6 136 chr3R 13439559 intergenic CR42756 - chr3R 13439627 intergenic CR42756 - chr3R 13439695 intergenic CR42756 - chr3R_10_13435001 chr3R_13435001 CanS-JC 1914 chr3R 13574578 13574598 chr3R 13574681 13574701 8 103 5.5 8.5 7.0 1.0 123 chr3R 13574578 intergenic CR43848 + chr3R 13574640 intergenic CR43848 + chr3R 13574701 intergenic CR43848 + chr3R_8_13570001 chr3R_13570001 CanS-JC 1915 chr3R 13580819 13580830 chr3R 13580922 13580933 5 103 11.0 9.0 10.0 0.5 114 chr3R 13580819 intergenic not near genes chr3R 13580876 intergenic not near genes chr3R 13580933 intergenic not near genes chr3R_5_13580001 chr3R_13580001 CanS-JC 1916 chr3R 13599040 13599081 chr3R 13599146 13599187 9 106 1.0 2.5 1.8 3.2 147 chr3R 13599040 intergenic not near genes chr3R 13599114 intergenic not near genes chr3R 13599187 intergenic not near genes chr3R_9_13595001 chr3R_13595001 CanS-JC 1917 chr3R 13603029 13603068 chr3R 13603146 13603185 14 117 6.0 6.0 6.0 2.0 156 chr3R 13603029 intergenic not near genes chr3R 13603107 intergenic not near genes chr3R 13603185 intergenic not near genes chr3R_14_13600001 chr3R_13600001 CanS-JC 1918 chr3R 13609562 13609581 chr3R 13609682 13609701 5 120 0.0 1.5 0.8 2.8 139 chr3R 13609562 intergenic CG9759 - chr3R 13609632 intergenic CG9759 - chr3R 13609701 intergenic CG9759 - chr3R_5_13605001 chr3R_13605001 CanS-JC 1919 chr3R 13850286 13850335 chr3R 13850407 13850449 6 120 0.0 3.0 1.5 2.4 163 chr3R 13850286 intergenic not near genes chr3R 13850368 intergenic not near genes chr3R 13850449 intergenic not near genes chr3R_6_13850001 chr3R_13850001 CanS-JC 1920 chr3R 13863659 13863710 chr3R 13863773 13863824 17 114 6.0 3.0 4.5 3.1 165 chr3R 13863659 intergenic not near genes chr3R 13863742 intergenic not near genes chr3R 13863824 intergenic not near genes chr3R_17_13860001 chr3R_13860001 CanS-JC 1921 chr3R 13885410 13885438 chr3R 13885513 13885541 10 103 2.5 5.0 3.8 2.1 131 chr3R 13885410 intergenic not near genes chr3R 13885476 intergenic not near genes chr3R 13885541 intergenic not near genes chr3R_10_13885001 chr3R_13885001 CanS-JC 1922 chr3R 13974532 13974537 chr3R 13974635 13974640 4 103 1.0 14.0 7.5 0.5 108 chr3R 13974532 intron,5` UTR rdx -,CR43460 + chr3R 13974586 intron,5` UTR rdx -,CR43460 + chr3R 13974640 intron,5` UTR rdx -,CR43460 + chr3R_4_13970001 chr3R_13970001 CanS-JC 1923 chr3R 13975349 13975406 chr3R 13975455 13975512 17 106 6.0 6.5 6.2 2.4 163 chr3R 13975349 intron rdx - chr3R 13975430 intron rdx - chr3R 13975512 intron rdx - chr3R_17_13975001 chr3R_13975001 CanS-JC 1924 chr3R 13994277 13994334 chr3R 13994558 13994615 20 281 4.0 2.5 3.2 4.8 338 chr3R 13994277 intron rdx - chr3R 13994446 intron rdx - chr3R 13994615 intron rdx - chr3R_20_13990001 chr3R_13990001 CanS-JC 1925 chr3R 14024542 14024591 chr3R 14024648 14024702 9 110 3.0 4.5 3.8 1.9 160 chr3R 14024542 intron rdx - chr3R 14024622 intron rdx - chr3R 14024702 intron rdx - chr3R_9_14020001 chr3R_14020001 CanS-JC 1926 chr3R 14194415 14194457 chr3R 14203590 14203632 roo 14 9174 4.5 4.0 4.2 2.7 9217 chr3R 14194415 intron Dop1R1 - chr3R 14199024 intron Dop1R1 - chr3R 14203632 intron Dop1R1 - chr3R_14_14195001 chr3R_14195001 CanS-JC 1927 chr3R 14842567 14842578 chr3R 14842677 14842688 5 110 8.5 7.5 8.0 0.6 121 chr3R 14842567 intron btsz - chr3R 14842628 intron btsz - chr3R 14842688 intron btsz - chr3R_5_14840001 chr3R_14840001 CanS-JC 1928 chr3R 14842584 14842593 chr3R 14842658 14842703 5 103 6.0 5.0 5.5 0.8 119 chr3R 14842584 intron btsz - chr3R 14842644 intron btsz - chr3R 14842703 intron btsz - chr3R_5_14840001 chr3R_14840001 CanS-JC 1929 chr3R 14898451 14898500 chr3R 14898597 14898646 5 146 4.5 3.0 3.8 1.0 195 chr3R 14898451 intergenic Nup93-2 -,CG3817 + chr3R 14898548 intergenic Nup93-2 -,CG3817 + chr3R 14898646 intergenic CG3817 +,Nup93-2 - chr3R_5_14895001 chr3R_14895001 CanS-JC 1930 chr3R 14923690 14923744 chr3R 14923792 14923847 9 102 2.5 2.5 2.5 2.6 157 chr3R 14923690 3` UTR CR45598 - chr3R 14923768 intergenic CR45598 - chr3R 14923847 intergenic CR45598 - chr3R_9_14920001 chr3R_14920001 CanS-JC 1931 chr3R 15041413 15041449 chr3R 15045207 15045243 Doc 9 3794 3.5 2.5 3.0 2.2 3830 chr3R 15041413 intergenic not near genes chr3R 15043328 intergenic not near genes chr3R 15045243 intergenic not near genes chr3R_9_15040001 chr3R_15040001 CanS-JC 1932 chr3R 15059252 15059476 chr3R 15059472 15059589 BS 12 198 0.0 0.0 0.0 12.0 337 chr3R 15059252 intron dpr9 - chr3R 15059420 intron dpr9 - chr3R 15059589 intron dpr9 - chr3R_12_15055001 chr3R_15055001 CanS-JC 1933 chr3R 15079780 15079835 chr3R 15080047 15080102 pogo 21 267 5.0 4.5 4.8 3.6 322 chr3R 15079780 3` UTR CG6966 - chr3R 15079941 3` UTR CG6966 - chr3R 15080102 3` UTR CG6966 - chr3R_21_15075001 chr3R_15075001 CanS-JC 1934 chr3R 15084120 15084168 chr3R 15084278 15084326 17 158 6.5 4.0 5.2 2.7 206 chr3R 15084120 intron CG6966 - chr3R 15084223 intron CG6966 - chr3R 15084326 intron CG6966 - chr3R_17_15080001 chr3R_15080001 CanS-JC 1935 chr3R 15102481 15102527 chr3R 15109764 15109806 412 7 7282 3.0 5.5 4.2 1.3 7325 chr3R 15102481 intron CG42788 - chr3R 15106144 intron CG42788 - chr3R 15109806 intron CG42788 - chr3R_7_15105001 chr3R_15105001 CanS-JC 1936 chr3R 15114895 15114928 chr3R 15114997 15115031 5 103 8.0 3.5 5.8 0.7 136 chr3R 15114895 intron CG42788 - chr3R 15114963 intron CG42788 - chr3R 15115031 intron CG42788 - chr3R_5_15110001 chr3R_15110001 CanS-JC 1937 chr3R 15132039 15132071 chr3R 15135125 15135157 Juan 16 3086 11.5 15.0 13.2 1.1 3118 chr3R 15132039 intergenic CG42788 - chr3R 15133598 intergenic not near genes chr3R 15135157 3` UTR CG6912 - chr3R_16_15130001 chr3R_15130001 CanS-JC 1938 chr3R 15130871 15130907 chr3R 15141206 15141242 8 10335 28.0 34.5 31.2 0.2 10371 chr3R 15130871 intron CG42788 - chr3R 15136056 exon CG6912 - chr3R 15141242 exon CG3987 + chr3R_8_15135001 chr3R_15135001 CanS-JC 1939 chr3R 15162530 15162547 chr3R 15167324 15167341 F-element 5 4794 8.5 5.5 7.0 0.6 4811 chr3R 15162530 intron Gyc88E + chr3R 15164936 intron Gyc88E + chr3R 15167341 intron Gyc88E + chr3R_5_15160001 chr3R_15160001 CanS-JC 1940 chr3R 15212666 15212715 chr3R 15214222 15214282 7 1561 30.0 13.5 21.8 0.3 1616 chr3R 15212666 exon CG6654 - chr3R 15213474 exon CG6654 - chr3R 15214282 intron CG4210 + chr3R_7_15210001 chr3R_15210001 CanS-JC 1941 chr3R 15302203 15302218 chr3R 15302315 15302330 5 112 13.0 4.0 8.5 0.5 127 chr3R 15302203 intron Tm1 + chr3R 15302266 intron Tm1 + chr3R 15302330 intron Tm1 + chr3R_5_15300001 chr3R_15300001 CanS-JC 1942 chr3R 15585275 15585329 chr3R 15585401 15585455 14 126 3.5 4.0 3.8 2.9 180 chr3R 15585275 intergenic not near genes chr3R 15585365 intergenic not near genes chr3R 15585455 intergenic not near genes chr3R_14_15585001 chr3R_15585001 CanS-JC 1943 chr3R 15601144 15601193 chr3R 15608692 15608741 412 15 7546 6.0 5.0 5.5 2.3 7597 chr3R 15601144 intergenic not near genes chr3R 15604942 intergenic not near genes chr3R 15608741 intergenic not near genes chr3R_15_15600001 chr3R_15600001 CanS-JC 1944 chr3R 15618704 15618763 chr3R 15626204 15626262 blood 14 7500 2.5 3.0 2.8 3.7 7558 chr3R 15618704 intergenic not near genes chr3R 15622483 intergenic not near genes chr3R 15626262 intergenic not near genes chr3R_14_15620001 chr3R_15620001 CanS-JC 1945 chr3R 15635182 15635240 chr3R 15635329 15635378 13 143 0.0 3.0 1.5 5.2 196 chr3R 15635182 intergenic CG43335 + chr3R 15635280 intergenic CG43335 + chr3R 15635378 intergenic CG43335 + chr3R_13_15635001 chr3R_15635001 CanS-JC 1946 chr3R 15646768 15646795 chr3R 15646877 15646904 4 109 4.0 3.5 3.8 0.8 136 chr3R 15646768 intergenic not near genes chr3R 15646836 intergenic not near genes chr3R 15646904 intergenic not near genes chr3R_4_15645001 chr3R_15645001 CanS-JC 1947 chr3R 15692496 15692545 chr3R 15692601 15692650 11 105 4.5 3.5 4.0 2.2 154 chr3R 15692496 intergenic not near genes chr3R 15692573 intergenic not near genes chr3R 15692650 intergenic CG31446 + chr3R_11_15690001 chr3R_15690001 CanS-JC 1948 chr3R 15702874 15702893 chr3R 15703090 15703109 8 214 0.0 6.5 3.2 1.9 235 chr3R 15702874 intergenic not near genes chr3R 15702992 intergenic not near genes chr3R 15703109 intergenic not near genes chr3R_8_15700001 chr3R_15700001 CanS-JC 1949 chr3R 15790109 15790244 chr3R 15790243 15790388 10 136 16.5 16.5 16.5 0.6 279 chr3R 15790109 exon c(3)G - chr3R 15790248 exon c(3)G - chr3R 15790388 exon c(3)G - chr3R_10_15790001 chr3R_15790001 CanS-JC 1950 chr3R 15790275 15790401 chr3R 15790572 15790633 5 258 18.5 23.5 21.0 0.2 358 chr3R 15790275 exon c(3)G - chr3R 15790454 exon c(3)G - chr3R 15790633 exon c(3)G - chr3R_5_15790001 chr3R_15790001 CanS-JC 1951 chr3R 15790814 15790860 chr3R 15790956 15791002 7 142 19.0 18.0 18.5 0.4 188 chr3R 15790814 exon c(3)G - chr3R 15790908 intron c(3)G - chr3R 15791002 exon c(3)G - chr3R_7_15790001 chr3R_15790001 CanS-JC 1952 chr3R 15817237 15817277 chr3R 15818265 15818305 13 1028 0.5 5.5 3.0 3.2 1068 chr3R 15817237 intron alpha-Man-IIb + chr3R 15817771 intron alpha-Man-IIb + chr3R 15818305 intron alpha-Man-IIb + chr3R_13_15815001 chr3R_15815001 CanS-JC 1953 chr3R 15878073 15878101 chr3R 15878187 15878215 12 114 5.5 2.0 3.8 2.5 142 chr3R 15878073 intergenic not near genes chr3R 15878144 intergenic not near genes chr3R 15878215 intergenic not near genes chr3R_12_15875001 chr3R_15875001 CanS-JC 1954 chr3R 15912518 15912552 chr3R 15912657 15912691 9 138 5.0 7.0 6.0 1.3 173 chr3R 15912518 intron CG45105 - chr3R 15912604 intron CG45105 - chr3R 15912691 3` UTR CG45105 - chr3R_9_15910001 chr3R_15910001 CanS-JC 1955 chr3R 16013107 16013157 chr3R 16013221 16013271 11 114 5.0 10.0 7.5 1.3 164 chr3R 16013107 intron GATAe + chr3R 16013189 intron GATAe + chr3R 16013271 intron GATAe + chr3R_11_16010001 chr3R_16010001 CanS-JC 1956 chr3R 16033399 16033425 chr3R 16033506 16033532 7 107 1.5 1.5 1.5 2.8 133 chr3R 16033399 intron pnr + chr3R 16033466 intron pnr + chr3R 16033532 intron pnr + chr3R_7_16030001 chr3R_16030001 CanS-JC 1957 chr3R 16246538 16246557 chr3R 16246640 16246659 8 102 1.0 8.0 4.5 1.5 121 chr3R 16246538 intron tara + chr3R 16246598 intron tara + chr3R 16246659 intron tara + chr3R_8_16245001 chr3R_16245001 CanS-JC 1958 chr3R 16374278 16374324 chr3R 16374421 16374467 11 143 1.5 5.0 3.2 2.6 189 chr3R 16374278 intergenic ss - chr3R 16374372 intergenic ss - chr3R 16374467 3` UTR ss - chr3R_11_16370001 chr3R_16370001 CanS-JC 1959 chr3R 16472561 16472572 chr3R 16472663 16472674 6 102 9.5 5.5 7.5 0.7 113 chr3R 16472561 intergenic Gyc-89Da + chr3R 16472618 5` UTR Gyc-89Da + chr3R 16472674 5` UTR Gyc-89Da + chr3R_6_16470001 chr3R_16470001 CanS-JC 1960 chr3R 16521181 16521232 chr3R 16521292 16521343 9 111 8.0 3.5 5.8 1.3 162 chr3R 16521181 intron CG42342 + chr3R 16521262 intron CG42342 + chr3R 16521343 intron CG42342 + chr3R_9_16520001 chr3R_16520001 CanS-JC 1961 chr3R 16582882 16582919 chr3R 16582987 16583024 15 104 5.5 4.0 4.8 2.6 142 chr3R 16582882 intron Scp2 - chr3R 16582953 intron Scp2 - chr3R 16583024 intron Scp2 - chr3R_15_16580001 chr3R_16580001 CanS-JC 1962 chr3R 16725761 16725807 chr3R 16725868 16725914 14 107 5.5 6.0 5.8 2.1 153 chr3R 16725761 intron Ubx - chr3R 16725838 intron Ubx - chr3R 16725914 intron Ubx - chr3R_14_16725001 chr3R_16725001 CanS-JC 1963 chr3R 16734861 16734878 chr3R 16734970 16734987 4 109 0.0 4.0 2.0 1.3 126 chr3R 16734861 intergenic Ubx - chr3R 16734924 intergenic Ubx - chr3R 16734987 intergenic not near genes chr3R_4_16730001 chr3R_16730001 CanS-JC 1964 chr3R 16743953 16743976 chr3R 16744075 16744098 9 122 7.0 3.0 5.0 1.5 145 chr3R 16743953 intron bxd - chr3R 16744026 intron bxd - chr3R 16744098 intron bxd - chr3R_9_16740001 chr3R_16740001 CanS-JC 1965 chr3R 16756296 16756341 chr3R 16762513 16762558 diver 15 6217 5.0 2.5 3.8 3.1 6262 chr3R 16756296 intron bxd - chr3R 16759427 intron bxd - chr3R 16762558 intron bxd - chr3R_15_16755001 chr3R_16755001 CanS-JC 1966 chr3R 17099216 17099256 chr3R 17099322 17099363 18 106 2.5 1.0 1.8 6.4 147 chr3R 17099216 intron cher - chr3R 17099290 intron cher - chr3R 17099363 intron cher - chr3R_18_17095001 chr3R_17095001 CanS-JC 1967 chr3R 17120484 17120521 chr3R 17120735 17120772 11 251 7.5 4.0 5.8 1.6 288 chr3R 17120484 intron,exon cher -,CG34278 + chr3R 17120628 intron,exon cher -,CG34278 + chr3R 17120772 intron,3` UTR cher -,CG34278 + chr3R_11_17120001 chr3R_17120001 CanS-JC 1968 chr3R 17121495 17121550 chr3R 17121716 17121771 16 221 4.5 1.5 3.0 4.0 276 chr3R 17121495 intron cher - chr3R 17121633 intron,exon cher -,CG42779 + chr3R 17121771 intron,exon cher -,CG42779 + chr3R_16_17120001 chr3R_17120001 CanS-JC 1969 chr3R 17184711 17184752 chr3R 17184813 17184854 9 102 5.0 5.5 5.2 1.5 143 chr3R 17184711 intron Mur89F - chr3R 17184782 intron Mur89F - chr3R 17184854 intron Mur89F - chr3R_9_17180001 chr3R_17180001 CanS-JC 1970 chr3R 17194393 17194427 chr3R 17194498 17194532 11 104 4.5 7.0 5.8 1.6 139 chr3R 17194393 intron Mur89F - chr3R 17194462 intron Mur89F - chr3R 17194532 intron Mur89F - chr3R_11_17190001 chr3R_17190001 CanS-JC 1971 chr3R 17209683 17209700 chr3R 17209797 17209814 9 114 6.0 9.0 7.5 1.1 131 chr3R 17209683 intergenic not near genes chr3R 17209748 intergenic not near genes chr3R 17209814 intergenic not near genes chr3R_9_17205001 chr3R_17205001 CanS-JC 1972 chr3R 17228341 17228377 chr3R 17228454 17228489 20 113 6.0 1.0 3.5 4.4 148 chr3R 17228341 intergenic not near genes chr3R 17228415 intergenic not near genes chr3R 17228489 intergenic not near genes chr3R_20_17225001 chr3R_17225001 CanS-JC 1973 chr3R 17268654 17268692 chr3R 17268802 17268840 10 148 5.5 4.0 4.8 1.7 186 chr3R 17268654 intergenic not near genes chr3R 17268747 intergenic not near genes chr3R 17268840 intergenic not near genes chr3R_10_17265001 chr3R_17265001 CanS-JC 1974 chr3R 17290416 17290458 chr3R 17290528 17290570 5 112 5.0 5.0 5.0 0.8 154 chr3R 17290416 intergenic not near genes chr3R 17290493 intergenic not near genes chr3R 17290570 intergenic not near genes chr3R_5_17290001 chr3R_17290001 CanS-JC 1975 chr3R 17294648 17294693 chr3R 17295102 17295147 BS 12 454 3.5 2.5 3.0 3.0 499 chr3R 17294648 intergenic not near genes chr3R 17294898 intergenic not near genes chr3R 17295147 intergenic not near genes chr3R_12_17290001 chr3R_17290001 CanS-JC 1976 chr3R 17312795 17312840 chr3R 17312906 17312948 25 110 3.5 3.0 3.2 6.0 153 chr3R 17312795 intergenic not near genes chr3R 17312872 intergenic not near genes chr3R 17312948 intergenic not near genes chr3R_25_17310001 chr3R_17310001 CanS-JC 1977 chr3R 17346666 17346704 chr3R 17348255 17348293 F-element 7 1589 6.0 8.0 7.0 0.9 1627 chr3R 17346666 intron beat-IIa - chr3R 17347480 intron beat-IIa - chr3R 17348293 intron beat-IIa - chr3R_7_17345001 chr3R_17345001 CanS-JC 1978 chr3R 17355468 17355519 chr3R 17355572 17355623 16 104 4.5 5.0 4.8 2.8 155 chr3R 17355468 intron beat-IIa - chr3R 17355546 intron beat-IIa - chr3R 17355623 intron beat-IIa - chr3R_16_17355001 chr3R_17355001 CanS-JC 1979 chr3R 17461176 17461229 chr3R 17461284 17461337 18 108 4.5 4.0 4.2 3.5 161 chr3R 17461176 intergenic not near genes chr3R 17461256 intergenic not near genes chr3R 17461337 intergenic not near genes chr3R_18_17460001 chr3R_17460001 CanS-JC 1980 chr3R 17497938 17497991 chr3R 17498050 17498103 23 112 3.0 3.0 3.0 5.8 165 chr3R 17497938 intron Dscam3 - chr3R 17498020 intron Dscam3 - chr3R 17498103 intron Dscam3 - chr3R_23_17495001 chr3R_17495001 CanS-JC 1981 chr3R 17498857 17498877 chr3R 17499025 17499045 8 168 1.5 9.5 5.5 1.2 188 chr3R 17498857 intron Dscam3 - chr3R 17498951 intron Dscam3 - chr3R 17499045 intron Dscam3 - chr3R_8_17495001 chr3R_17495001 CanS-JC 1982 chr3R 17509227 17509246 chr3R 17516808 17516827 412 6 7580 6.5 9.5 8.0 0.7 7600 chr3R 17509227 intergenic not near genes chr3R 17513027 intergenic not near genes chr3R 17516827 intergenic not near genes chr3R_6_17510001 chr3R_17510001 CanS-JC 1983 chr3R 17521572 17521580 chr3R 17521758 17521766 8 185 6.0 6.0 6.0 1.1 194 chr3R 17521572 intergenic not near genes chr3R 17521669 intergenic not near genes chr3R 17521766 intergenic not near genes chr3R_8_17520001 chr3R_17520001 CanS-JC 1984 chr3R 17554331 17554380 chr3R 17554634 17554683 19 303 4.5 5.5 5.0 3.2 352 chr3R 17554331 intergenic not near genes chr3R 17554507 intergenic not near genes chr3R 17554683 intergenic not near genes chr3R_19_17550001 chr3R_17550001 CanS-JC 1985 chr3R 17591262 17591303 chr3R 17591724 17591765 F-element 11 462 8.0 6.5 7.2 1.3 503 chr3R 17591262 intergenic not near genes chr3R 17591514 intergenic not near genes chr3R 17591765 intergenic not near genes chr3R_11_17590001 chr3R_17590001 CanS-JC 1986 chr3R 17638295 17638345 chr3R 17638807 17638857 roo 10 512 2.5 5.0 3.8 2.1 562 chr3R 17638295 intron CG43175 + chr3R 17638576 intron CG43175 + chr3R 17638857 intron,intron CG43175 +,CR45222 + chr3R_10_17635001 chr3R_17635001 CanS-JC 1987 chr3R 17647227 17647274 chr3R 17647350 17647397 14 123 1.5 1.0 1.2 6.4 170 chr3R 17647227 intergenic CG14322 + chr3R 17647312 intergenic CG14322 + chr3R 17647397 intergenic CG14322 + chr3R_14_17645001 chr3R_17645001 CanS-JC 1988 chr3R 17702152 17702202 chr3R 17702257 17702306 21 103 9.0 3.5 6.2 2.9 154 chr3R 17702152 intron osa - chr3R 17702229 intron osa - chr3R 17702306 intron osa - chr3R_21_17700001 chr3R_17700001 CanS-JC 1989 chr3R 17925833 17925868 chr3R 17927326 17927361 hobo 6 1493 12.5 7.5 10.0 0.5 1528 chr3R 17925833 intron cpo + chr3R 17926597 intron cpo + chr3R 17927361 intron cpo + chr3R_6_17925001 chr3R_17925001 CanS-JC 1990 chr3R 17983192 17983230 chr3R 17983294 17983332 11 102 4.5 0.0 2.2 3.4 140 chr3R 17983192 intron cpo + chr3R 17983262 intron cpo + chr3R 17983332 intron cpo + chr3R_11_17980001 chr3R_17980001 CanS-JC 1991 chr3R 18041744 18041759 chr3R 18041847 18041862 5 103 2.0 0.0 1.0 2.5 118 chr3R 18041744 intergenic not near genes chr3R 18041803 intergenic not near genes chr3R 18041862 intergenic not near genes chr3R_5_18040001 chr3R_18040001 CanS-JC 1992 chr3R 18061565 18061608 chr3R 18063159 18063202 F-element 14 1594 3.5 4.0 3.8 2.9 1637 chr3R 18061565 intergenic not near genes chr3R 18062384 intergenic not near genes chr3R 18063202 intergenic not near genes chr3R_14_18060001 chr3R_18060001 CanS-JC 1993 chr3R 18065625 18065667 chr3R 18065762 18065804 4 137 0.0 4.5 2.2 1.2 179 chr3R 18065625 intergenic not near genes chr3R 18065714 intergenic not near genes chr3R 18065804 intergenic not near genes chr3R_4_18065001 chr3R_18065001 CanS-JC 1994 chr3R 18067955 18068019 chr3R 18068077 18068127 5 114 0.5 3.0 1.8 1.8 172 chr3R 18067955 intergenic not near genes chr3R 18068041 intergenic not near genes chr3R 18068127 intergenic not near genes chr3R_5_18065001 chr3R_18065001 CanS-JC 1995 chr3R 18078131 18078150 chr3R 18078236 18078255 4 105 8.0 0.0 4.0 0.8 124 chr3R 18078131 intergenic not near genes chr3R 18078193 intergenic not near genes chr3R 18078255 intergenic not near genes chr3R_4_18075001 chr3R_18075001 CanS-JC 1996 chr3R 18098275 18098282 chr3R 18098378 18098385 4 103 3.0 1.5 2.2 1.2 110 chr3R 18098275 intron sr + chr3R 18098330 intron sr + chr3R 18098385 intron sr + chr3R_4_18095001 chr3R_18095001 CanS-JC 1997 chr3R 18119719 18119754 chr3R 18119822 18119857 9 103 3.5 0.5 2.0 3.0 138 chr3R 18119719 intron sr + chr3R 18119788 intron sr + chr3R 18119857 intron sr + chr3R_9_18115001 chr3R_18115001 CanS-JC 1998 chr3R 18485308 18485350 chr3R 18485431 18485476 4 125 1.0 3.0 2.0 1.3 168 chr3R 18485308 intron fru - chr3R 18485392 intron fru - chr3R 18485476 intron fru - chr3R_4_18485001 chr3R_18485001 CanS-JC 1999 chr3R 18501582 18501617 chr3R 18501689 18501724 8 107 8.0 7.5 7.8 0.9 142 chr3R 18501582 intron fru - chr3R 18501653 intron fru - chr3R 18501724 intron fru - chr3R_8_18500001 chr3R_18500001 CanS-JC 2000 chr3R 18575546 18575601 chr3R 18575656 18575711 16 110 4.5 4.5 4.5 2.9 165 chr3R 18575546 intron,intron CG7694 +,fray + chr3R 18575628 intron,intron CG7694 +,fray + chr3R 18575711 intron,intron CG7694 +,fray + chr3R_16_18575001 chr3R_18575001 CanS-JC 2001 chr3R 18606479 18606529 chr3R 18610737 18610787 F-element 10 4258 12.0 5.0 8.5 1.1 4308 chr3R 18606479 intron,intron qin +,CG14304 - chr3R 18608633 intron,intron qin +,CG14304 - chr3R 18610787 intron,intron qin +,CG14304 - chr3R_10_18605001 chr3R_18605001 CanS-JC 2002 chr3R 18618243 18618291 chr3R 18618354 18618402 12 111 2.5 2.5 2.5 3.4 159 chr3R 18618243 intron,intron qin +,CG14304 - chr3R 18618322 intron,intron qin +,CG14304 - chr3R 18618402 intron,intron qin +,CG14304 - chr3R_12_18615001 chr3R_18615001 CanS-JC 2003 chr3R 18940668 18940709 chr3R 18940774 18940828 5 111 4.0 0.0 2.0 1.7 160 chr3R 18940668 intron CG42613 + chr3R 18940748 intron CG42613 + chr3R 18940828 intron CG42613 + chr3R_5_18940001 chr3R_18940001 CanS-JC 2004 chr3R 19033899 19033952 chr3R 19034003 19034056 18 104 4.5 7.5 6.0 2.6 157 chr3R 19033899 intron CG6026 + chr3R 19033978 intron CG6026 + chr3R 19034056 intron CG6026 + chr3R_18_19030001 chr3R_19030001 CanS-JC 2005 chr3R 19101567 19101611 chr3R 19101677 19101690 13 108 6.0 7.5 6.8 1.7 123 chr3R 19101567 intron CG6040 + chr3R 19101628 intron CG6040 + chr3R 19101690 intron CG6040 + chr3R_13_19100001 chr3R_19100001 CanS-JC 2006 chr3R 19140248 19140294 chr3R 19140722 19140768 17 474 3.0 7.0 5.0 2.8 520 chr3R 19140248 3` UTR Ppcs - chr3R 19140508 3` UTR Ppcs - chr3R 19140768 3` UTR Ppcs - chr3R_17_19140001 chr3R_19140001 CanS-JC 2007 chr3R 19372404 19372445 chr3R 19372506 19372547 11 102 9.0 5.0 7.0 1.4 143 chr3R 19372404 intron Ino80 - chr3R 19372476 intron Ino80 - chr3R 19372547 intron Ino80 - chr3R_11_19370001 chr3R_19370001 CanS-JC 2008 chr3R 19431089 19431125 chr3R 19431350 19431386 12 260 1.5 6.5 4.0 2.4 297 chr3R 19431089 intron CG31221 + chr3R 19431238 intron CG31221 + chr3R 19431386 intron CG31221 + chr3R_12_19430001 chr3R_19430001 CanS-JC 2009 chr3R 19490423 19490469 chr3R 19490538 19490584 15 115 6.0 7.0 6.5 2.0 161 chr3R 19490423 intron,exon Dys +,CG15025 - chr3R 19490504 intron,intron Dys +,CG15025 - chr3R 19490584 intron,exon Dys +,CG15025 - chr3R_15_19490001 chr3R_19490001 CanS-JC 2010 chr3R 19505912 19505964 chr3R 19506037 19506089 12 125 5.0 5.5 5.2 1.9 177 chr3R 19505912 exon Dys + chr3R 19506000 intron Dys + chr3R 19506089 intron Dys + chr3R_12_19505001 chr3R_19505001 CanS-JC 2011 chr3R 19590622 19590683 chr3R 19590740 19590794 9 117 0.0 4.0 2.0 3.0 172 chr3R 19590622 exon Dys + chr3R 19590708 intron Dys + chr3R 19590794 exon Dys + chr3R_9_19590001 chr3R_19590001 CanS-JC 2012 chr3R 19599036 19599092 chr3R 19599292 19599348 15 256 4.0 2.0 3.0 3.8 312 chr3R 19599036 intergenic Cpr92A - chr3R 19599192 intergenic Cpr92A - chr3R 19599348 intergenic Cpr92A - chr3R_15_19595001 chr3R_19595001 CanS-JC 2013 chr3R 19602736 19602778 chr3R 19602840 19602880 13 103 3.0 1.0 2.0 4.3 144 chr3R 19602736 intergenic CG7333 + chr3R 19602808 intergenic CG7333 + chr3R 19602880 intergenic CG7333 +,CG7342 + chr3R_13_19600001 chr3R_19600001 CanS-JC 2014 chr3R 19638475 19638520 chr3R 19638587 19638632 8 110 2.0 4.0 3.0 2.0 157 chr3R 19638475 intron subdued - chr3R 19638554 intron subdued - chr3R 19638632 intron subdued - chr3R_8_19635001 chr3R_19635001 CanS-JC 2015 chr3R 19717187 19717235 chr3R 19717385 19717434 16 199 2.5 9.5 6.0 2.3 247 chr3R 19717187 intergenic not near genes chr3R 19717310 intergenic not near genes chr3R 19717434 intergenic not near genes chr3R_16_19715001 chr3R_19715001 CanS-JC 2016 chr3R 19728118 19728160 chr3R 19728220 19728262 12 101 3.5 6.0 4.8 2.1 144 chr3R 19728118 intergenic not near genes chr3R 19728190 intergenic not near genes chr3R 19728262 intergenic not near genes chr3R_12_19725001 chr3R_19725001 CanS-JC 2017 chr3R 19735685 19735740 chr3R 19735817 19735872 15 132 4.0 0.5 2.2 4.7 187 chr3R 19735685 intron GluClalpha + chr3R 19735778 intron GluClalpha + chr3R 19735872 intron GluClalpha + chr3R_15_19735001 chr3R_19735001 CanS-JC 2018 chr3R 19783159 19783211 chr3R 19783273 19783325 11 114 3.0 5.5 4.2 2.1 166 chr3R 19783159 intergenic CG11407 +,CG11453 + chr3R 19783242 intergenic CG11407 +,CG11453 + chr3R 19783325 intergenic CG11407 +,CG11453 + chr3R_11_19780001 chr3R_19780001 CanS-JC 2019 chr3R 19825006 19825044 chr3R 19825113 19825151 8 107 2.0 2.5 2.2 2.5 145 chr3R 19825006 intron bnl - chr3R 19825078 intron bnl - chr3R 19825151 intron bnl - chr3R_8_19825001 chr3R_19825001 CanS-JC 2020 chr3R 19863995 19864039 chr3R 19869070 19869114 8 5075 26.5 38.5 32.5 0.2 5119 chr3R 19863995 exon CG4572 - chr3R 19866554 exon,3` UTR CG4686 +,CG4562 - chr3R 19869114 exon CG4562 - chr3R_8_19865001 chr3R_19865001 CanS-JC 2021 chr3R 19908245 19908290 chr3R 19908355 19908400 6 110 0.0 3.5 1.8 2.1 155 chr3R 19908245 intron RhoGAP92B + chr3R 19908322 intron RhoGAP92B + chr3R 19908400 intron RhoGAP92B + chr3R_6_19905001 chr3R_19905001 CanS-JC 2022 chr3R 19989823 19989872 chr3R 19989929 19989978 17 106 5.0 6.0 5.5 2.6 155 chr3R 19989823 intron Hs6st - chr3R 19989900 intron Hs6st - chr3R 19989978 intron Hs6st - chr3R_17_19985001 chr3R_19985001 CanS-JC 2023 chr3R 20008803 20008851 chr3R 20008910 20008958 12 107 3.5 4.5 4.0 2.4 155 chr3R 20008803 intergenic MED25 +,Hs6st - chr3R 20008880 intergenic MED25 +,Hs6st - chr3R 20008958 5` UTR MED25 + chr3R_12_20005001 chr3R_20005001 CanS-JC 2024 chr3R 20039761 20039803 chr3R 20040186 20040228 9 425 5.0 12.0 8.5 0.9 467 chr3R 20039761 intron CG17193 - chr3R 20039994 intron CG17193 - chr3R 20040228 intron CG17193 - chr3R_9_20035001 chr3R_20035001 CanS-JC 2025 chr3R 20045678 20045727 chr3R 20045790 20045838 4 112 2.5 2.0 2.2 1.2 160 chr3R 20045678 intron,5` UTR,3` UTR CG17193 -,CG33934 +,Indy-2 + chr3R 20045758 intron,5` UTR,3` UTR CG17193 -,CG33934 +,Indy-2 + chr3R 20045838 intron,5` UTR,3` UTR CG17193 -,CG33934 +,Indy-2 + chr3R_4_20045001 chr3R_20045001 CanS-JC 2026 chr3R 20060605 20060653 chr3R 20060714 20060762 14 108 6.0 4.0 5.0 2.3 157 chr3R 20060605 intergenic not near genes chr3R 20060684 intergenic not near genes chr3R 20060762 intergenic not near genes chr3R_14_20060001 chr3R_20060001 CanS-JC 2027 chr3R 20109513 20109564 chr3R 20114745 20114796 copia 15 5232 6.5 4.0 5.2 2.4 5283 chr3R 20109513 intergenic not near genes chr3R 20112154 intergenic not near genes chr3R 20114796 intergenic CG10887 + chr3R_15_20110001 chr3R_20110001 CanS-JC 2028 chr3R 20144593 20144605 chr3R 20144722 20144729 4 128 3.5 9.5 6.5 0.5 136 chr3R 20144593 intergenic not near genes chr3R 20144661 intergenic not near genes chr3R 20144729 intergenic not near genes chr3R_4_20140001 chr3R_20140001 CanS-JC 2029 chr3R 20156678 20156718 chr3R 20165874 20165914 roo 12 9196 4.0 9.0 6.5 1.6 9236 chr3R 20156678 intergenic not near genes chr3R 20161296 intergenic not near genes chr3R 20165914 intergenic not near genes chr3R_12_20160001 chr3R_20160001 CanS-JC 2030 chr3R 20180682 20180711 chr3R 20180793 20180822 6 111 4.5 7.0 5.8 0.9 140 chr3R 20180682 intergenic not near genes chr3R 20180752 intergenic not near genes chr3R 20180822 intergenic not near genes chr3R_6_20180001 chr3R_20180001 CanS-JC 2031 chr3R 20205541 20205596 chr3R 20205689 20205744 10 148 6.0 4.5 5.2 1.6 203 chr3R 20205541 intron Nlg4 + chr3R 20205642 intron Nlg4 + chr3R 20205744 intron Nlg4 + chr3R_10_20205001 chr3R_20205001 CanS-JC 2032 chr3R 20205920 20205936 chr3R 20206030 20206046 8 110 2.0 1.0 1.5 3.2 126 chr3R 20205920 intron Nlg4 + chr3R 20205983 intron Nlg4 + chr3R 20206046 intron Nlg4 + chr3R_8_20205001 chr3R_20205001 CanS-JC 2033 chr3R 20218544 20218595 chr3R 20218830 20218881 10 286 4.5 5.5 5.0 1.7 337 chr3R 20218544 intron Nlg4 + chr3R 20218712 intron Nlg4 + chr3R 20218881 intron Nlg4 + chr3R_10_20215001 chr3R_20215001 CanS-JC 2034 chr3R 20230319 20230339 chr3R 20230426 20230446 4 107 6.0 5.5 5.8 0.6 127 chr3R 20230319 intron Nlg4 + chr3R 20230382 intron Nlg4 + chr3R 20230446 intron Nlg4 + chr3R_4_20230001 chr3R_20230001 CanS-JC 2035 chr3R 20245268 20245302 chr3R 20248904 20248938 F-element 10 3634 3.5 0.0 1.8 3.6 3670 chr3R 20245268 3` UTR Nlg4 + chr3R 20247103 intergenic not near genes chr3R 20248938 intergenic not near genes chr3R_10_20245001 chr3R_20245001 CanS-JC 2036 chr3R 20252193 20252249 chr3R 20252297 20252353 5 104 0.5 0.0 0.2 4.2 160 chr3R 20252193 intergenic not near genes chr3R 20252273 intergenic cic + chr3R 20252353 intergenic cic + chr3R_5_20250001 chr3R_20250001 CanS-JC 2037 chr3R 20256814 20256867 chr3R 20256916 20256971 7 104 0.0 1.5 0.8 3.9 157 chr3R 20256814 intron cic + chr3R 20256892 intron cic + chr3R 20256971 intron cic + chr3R_7_20255001 chr3R_20255001 CanS-JC 2038 chr3R 20266510 20266537 chr3R 20273006 20273034 Burdock 10 6497 0.5 9.0 4.8 1.7 6524 chr3R 20266510 intron cic + chr3R 20269772 intron cic + chr3R 20273034 intron cic + chr3R_10_20265001 chr3R_20265001 CanS-JC 2039 chr3R 20282249 20282301 chr3R 20282351 20282403 6 102 1.0 3.5 2.2 1.9 154 chr3R 20282249 intron cic + chr3R 20282326 intron cic + chr3R 20282403 intron cic + chr3R_6_20280001 chr3R_20280001 CanS-JC 2040 chr3R 20330974 20331013 chr3R 20331486 20331525 roo 13 512 3.5 4.5 4.0 2.6 551 chr3R 20330974 intergenic Sirt2 + chr3R 20331250 intergenic Sirt2 + chr3R 20331525 intergenic not near genes chr3R_13_20330001 chr3R_20330001 CanS-JC 2041 chr3R 20430874 20430894 chr3R 20430981 20431001 6 107 2.0 14.5 8.2 0.7 127 chr3R 20430874 intron Gfrl - chr3R 20430938 intron Gfrl - chr3R 20431001 intron Gfrl - chr3R_6_20430001 chr3R_20430001 CanS-JC 2042 chr3R 20465580 20465640 chr3R 20465708 20465761 15 128 2.0 3.0 2.5 4.3 181 chr3R 20465580 intron Gfrl - chr3R 20465670 intron Gfrl - chr3R 20465761 intron Gfrl - chr3R_15_20465001 chr3R_20465001 CanS-JC 2043 chr3R 20468782 20468785 chr3R 20468886 20468896 4 109 9.5 5.0 7.2 0.5 114 chr3R 20468782 intron Gfrl - chr3R 20468839 intron Gfrl - chr3R 20468896 intron Gfrl - chr3R_4_20465001 chr3R_20465001 CanS-JC 2044 chr3R 20506565 20506597 chr3R 20507394 20507426 BS 15 829 0.0 5.0 2.5 4.3 861 chr3R 20506565 intergenic Or92a + chr3R 20506996 intergenic CG4288 - chr3R 20507426 3` UTR CG4288 - chr3R_15_20505001 chr3R_20505001 CanS-JC 2045 chr3R 20512984 20513031 chr3R 20515713 20515760 opus 6 2729 7.5 2.5 5.0 1.0 2776 chr3R 20512984 intergenic not near genes chr3R 20514372 intergenic not near genes chr3R 20515760 intergenic not near genes chr3R_6_20510001 chr3R_20510001 CanS-JC 2046 chr3R 20516514 20516570 chr3R 20516896 20516953 17 382 1.0 3.0 2.0 5.7 439 chr3R 20516514 intergenic not near genes chr3R 20516734 intergenic not near genes chr3R 20516953 intergenic not near genes chr3R_17_20515001 chr3R_20515001 CanS-JC 2047 chr3R 20594477 20594503 chr3R 20594593 20594619 5 116 2.0 0.0 1.0 2.5 142 chr3R 20594477 intron bon + chr3R 20594548 intron bon + chr3R 20594619 intron bon + chr3R_5_20590001 chr3R_20590001 CanS-JC 2048 chr3R 20703461 20703509 chr3R 20703881 20703929 10 419 6.0 5.5 5.8 1.5 468 chr3R 20703461 intron Oamb - chr3R 20703695 intron Oamb - chr3R 20703929 intron Oamb - chr3R_10_20700001 chr3R_20700001 CanS-JC 2049 chr3R 20707725 20707773 chr3R 20707966 20708014 21 241 1.5 3.0 2.2 6.6 289 chr3R 20707725 intron Oamb - chr3R 20707870 intron Oamb - chr3R 20708014 intron Oamb - chr3R_21_20705001 chr3R_20705001 CanS-JC 2050 chr3R 20722831 20722885 chr3R 20722984 20723038 13 153 3.0 3.5 3.2 3.1 207 chr3R 20722831 intergenic not near genes chr3R 20722934 intergenic not near genes chr3R 20723038 intergenic not near genes chr3R_13_20720001 chr3R_20720001 CanS-JC 2051 chr3R 20730910 20731059 chr3R 20731036 20731173 14 117 0.0 0.0 0.0 14.0 263 chr3R 20730910 intergenic not near genes chr3R 20731042 intergenic not near genes chr3R 20731173 intergenic CG31205 + chr3R_14_20730001 chr3R_20730001 CanS-JC 2052 chr3R 20767505 20767531 chr3R 20767627 20767652 11 122 6.0 11.0 8.5 1.2 147 chr3R 20767505 intron Syp + chr3R 20767578 intron Syp + chr3R 20767652 intron Syp + chr3R_11_20765001 chr3R_20765001 CanS-JC 2053 chr3R 20769571 20769604 chr3R 20769713 20769757 5 150 4.5 0.0 2.2 1.6 186 chr3R 20769571 intron Syp + chr3R 20769664 intron Syp + chr3R 20769757 intron Syp + chr3R_5_20765001 chr3R_20765001 CanS-JC 2054 chr3R 20787418 20787451 chr3R 20787535 20787568 14 117 4.0 5.0 4.5 2.5 150 chr3R 20787418 intron Syp + chr3R 20787493 intron Syp + chr3R 20787568 intron Syp + chr3R_14_20785001 chr3R_20785001 CanS-JC 2055 chr3R 20854463 20854509 chr3R 20859284 20859325 Doc 11 4819 0.0 4.5 2.2 3.4 4862 chr3R 20854463 intron Ir93a - chr3R 20856894 intron Ir93a - chr3R 20859325 exon Ir93a - chr3R_11_20855001 chr3R_20855001 CanS-JC 2056 chr3R 20870231 20870283 chr3R 20870342 20870394 10 111 3.5 5.5 4.5 1.8 163 chr3R 20870231 intergenic not near genes chr3R 20870312 intergenic not near genes chr3R 20870394 intergenic not near genes chr3R_10_20870001 chr3R_20870001 CanS-JC 2057 chr3R 20936060 20936104 chr3R 20936163 20936207 6 103 2.0 1.5 1.8 2.1 147 chr3R 20936060 intron CG31191 - chr3R 20936134 intron CG31191 - chr3R 20936207 intron CG31191 - chr3R_6_20935001 chr3R_20935001 CanS-JC 2058 chr3R 21013990 21014027 chr3R 21014094 21014131 11 104 5.0 2.5 3.8 2.3 141 chr3R 21013990 3` UTR Calx + chr3R 21014060 3` UTR Calx + chr3R 21014131 3` UTR Calx + chr3R_11_21010001 chr3R_21010001 CanS-JC 2059 chr3R 21049848 21049904 chr3R 21050067 21050123 9 219 6.0 2.0 4.0 1.8 275 chr3R 21049848 intergenic CG17279 - chr3R 21049986 intergenic CG17279 - chr3R 21050123 exon CG17279 - chr3R_9_21045001 chr3R_21045001 CanS-JC 2060 chr3R 21074806 21074822 chr3R 21075053 21075069 5 247 3.5 8.0 5.8 0.7 263 chr3R 21074806 intron dmrt93B + chr3R 21074938 intron dmrt93B + chr3R 21075069 intron dmrt93B + chr3R_5_21070001 chr3R_21070001 CanS-JC 2061 chr3R 21108014 21108052 chr3R 21108301 21108339 4 287 5.0 3.0 4.0 0.8 325 chr3R 21108014 intergenic Sec15 -,rtet + chr3R 21108176 intergenic Sec15 -,rtet + chr3R 21108339 intergenic rtet +,Sec15 - chr3R_4_21105001 chr3R_21105001 CanS-JC 2062 chr3R 21132605 21132645 chr3R 21132714 21132754 8 101 4.5 0.0 2.2 2.5 149 chr3R 21132605 3` UTR Ice2 + chr3R 21132680 3` UTR Ice2 + chr3R 21132754 exon CG7009 - chr3R_8_21130001 chr3R_21130001 CanS-JC 2063 chr3R 21141652 21141706 chr3R 21150159 21150212 Tirant 6 8507 3.0 4.0 3.5 1.3 8560 chr3R 21141652 intron SNF4Agamma + chr3R 21145932 intron SNF4Agamma + chr3R 21150212 intron SNF4Agamma + chr3R_6_21145001 chr3R_21145001 CanS-JC 2064 chr3R 21154558 21154587 chr3R 21154799 21154828 4 241 4.5 4.0 4.2 0.8 270 chr3R 21154558 intron SNF4Agamma + chr3R 21154693 intron SNF4Agamma + chr3R 21154828 intron SNF4Agamma + chr3R_4_21150001 chr3R_21150001 CanS-JC 2065 chr3R 21183239 21183263 chr3R 21183343 21183367 10 104 4.5 5.0 4.8 1.7 128 chr3R 21183239 intron SNF4Agamma + chr3R 21183303 intron SNF4Agamma + chr3R 21183367 intron SNF4Agamma + chr3R_10_21180001 chr3R_21180001 CanS-JC 2066 chr3R 21214686 21214697 chr3R 21214793 21214804 6 107 2.0 0.0 1.0 3.0 118 chr3R 21214686 intergenic CG5862 + chr3R 21214745 intergenic CG5862 + chr3R 21214804 intergenic CG5862 + chr3R_6_21210001 chr3R_21210001 CanS-JC 2067 chr3R 21240420 21240475 chr3R 21240538 21240593 24 118 5.5 4.5 5.0 4.0 173 chr3R 21240420 intergenic not near genes chr3R 21240506 intergenic not near genes chr3R 21240593 intergenic not near genes chr3R_24_21240001 chr3R_21240001 CanS-JC 2068 chr3R 21322948 21323006 chr3R 21323053 21323114 12 106 4.0 1.5 2.8 3.2 166 chr3R 21322948 exon CG16791 - chr3R 21323031 intron CG16791 - chr3R 21323114 intron CG16791 - chr3R_12_21320001 chr3R_21320001 CanS-JC 2069 chr3R 21367290 21367339 chr3R 21371423 21371472 21 4133 30.5 42.5 36.5 0.6 4182 chr3R 21367290 intron,5` UTR,intron,5` UTR,intron,intron,intron,intron mod(mdg4) -,pre-mod(mdg4)-AD +,pre-mod(mdg4)-AE +,pre-mod(mdg4)-U +,pre-mod(mdg4)-V +,pre-mod(mdg4)-W +,pre-mod(mdg4)-X +,pre-mod(mdg4)-Y + chr3R 21369381 intron,5` UTR mod(mdg4) -,pre-mod(mdg4)-U + chr3R 21371472 intron mod(mdg4) - chr3R_21_21365001 chr3R_21365001 CanS-JC 2070 chr3R 21408506 21408534 chr3R 21408609 21408637 6 103 3.5 1.5 2.5 1.7 131 chr3R 21408506 intergenic CheB93a + chr3R 21408572 intergenic CheB93a + chr3R 21408637 intergenic CheB93a +,CheB93b + chr3R_6_21405001 chr3R_21405001 CanS-JC 2071 chr3R 21464376 21464426 chr3R 21464488 21464536 7 111 2.0 2.0 2.0 2.3 160 chr3R 21464376 intergenic not near genes chr3R 21464456 intergenic not near genes chr3R 21464536 intergenic not near genes chr3R_7_21460001 chr3R_21460001 CanS-JC 2072 chr3R 21472000 21472018 chr3R 21472107 21472125 6 107 5.5 4.5 5.0 1.0 125 chr3R 21472000 intergenic not near genes chr3R 21472062 intergenic not near genes chr3R 21472125 intergenic not near genes chr3R_6_21470001 chr3R_21470001 CanS-JC 2073 chr3R 21481363 21481369 chr3R 21481480 21481486 5 117 12.0 0.0 6.0 0.7 123 chr3R 21481363 intergenic not near genes chr3R 21481424 intergenic not near genes chr3R 21481486 intergenic not near genes chr3R_5_21480001 chr3R_21480001 CanS-JC 2074 chr3R 21518005 21518271 chr3R 21518160 21518381 4 119 0.0 0.0 0.0 4.0 376 chr3R 21518005 intergenic not near genes chr3R 21518193 intergenic not near genes chr3R 21518381 intergenic not near genes chr3R_4_21515001 chr3R_21515001 CanS-JC 2075 chr3R 21519969 21520132 chr3R 21520096 21520252 15 126 0.5 0.5 0.5 10.0 283 chr3R 21519969 intergenic not near genes chr3R 21520110 intergenic not near genes chr3R 21520252 intergenic not near genes chr3R_15_21520001 chr3R_21520001 CanS-JC 2076 chr3R 21532757 21532861 chr3R 21532863 21532972 5 108 0.0 0.0 0.0 5.0 215 chr3R 21532757 3` UTR CR43372 - chr3R 21532864 intron CR43372 - chr3R 21532972 3` UTR CR43372 - chr3R_5_21530001 chr3R_21530001 CanS-JC 2077 chr3R 21624083 21624117 chr3R 21624203 21624237 8 120 5.0 7.0 6.0 1.1 154 chr3R 21624083 exon E2f - chr3R 21624160 intron E2f - chr3R 21624237 intron E2f - chr3R_8_21620001 chr3R_21620001 CanS-JC 2078 chr3R 21758958 21759013 chr3R 21759262 21759317 19 303 2.5 4.0 3.2 4.5 359 chr3R 21758958 exon CG42335 + chr3R 21759138 exon CG42335 + chr3R 21759317 exon CG42335 + chr3R_19_21755001 chr3R_21755001 CanS-JC 2079 chr3R 21761102 21761150 chr3R 21768520 21768568 mdg1 14 7418 4.0 5.0 4.5 2.5 7466 chr3R 21761102 exon CG42335 + chr3R 21764835 intron CG42335 + chr3R 21768568 exon CG42335 + chr3R_14_21760001 chr3R_21760001 CanS-JC 2080 chr3R 21785951 21786004 chr3R 21786059 21786112 11 108 3.5 5.0 4.2 2.1 161 chr3R 21785951 3` UTR,3` UTR CASK -,CRG - chr3R 21786032 3` UTR,3` UTR CASK -,CRG - chr3R 21786112 3` UTR,3` UTR CASK -,CRG - chr3R_11_21785001 chr3R_21785001 CanS-JC 2081 chr3R 21790936 21790987 chr3R 21791047 21791098 15 111 1.0 4.5 2.8 3.9 162 chr3R 21790936 intron CASK - chr3R 21791017 intron CASK - chr3R 21791098 intron CASK - chr3R_15_21790001 chr3R_21790001 CanS-JC 2082 chr3R 21794440 21794479 chr3R 21794556 21794595 13 115 3.0 4.0 3.5 2.9 155 chr3R 21794440 intron CASK - chr3R 21794518 intron CASK - chr3R 21794595 intron CASK - chr3R_13_21790001 chr3R_21790001 CanS-JC 2083 chr3R 21863497 21863502 chr3R 21863623 21863628 4 126 14.0 4.5 9.2 0.4 131 chr3R 21863497 intergenic not near genes chr3R 21863562 intergenic not near genes chr3R 21863628 intergenic not near genes chr3R_4_21860001 chr3R_21860001 CanS-JC 2084 chr3R 21903618 21903633 chr3R 21903741 21903756 4 123 0.0 7.5 3.8 0.8 138 chr3R 21903618 intron CG6678 + chr3R 21903687 intron CG6678 + chr3R 21903756 intron CG6678 + chr3R_4_21900001 chr3R_21900001 CanS-JC 2085 chr3R 8339247 8339247 chr3R 21907534 21907534 4 13568287 18.5 24.5 21.5 0.2 13568287 chr3R 8339247 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907534 intergenic CG6678 + chr3R_4_15120001 chr3R_15120001 CanS-JC 2086 chr3R 21907534 21907534 chr3R 28831801 28831802 17 6924267 23.5 22.5 23.0 0.7 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_17_25365001 chr3R_25365001 CanS-JC 2087 chr3R 21937203 21937231 chr3R 21937306 21937334 13 103 6.0 7.5 6.8 1.7 131 chr3R 21937203 intergenic not near genes chr3R 21937268 intergenic not near genes chr3R 21937334 intergenic not near genes chr3R_13_21935001 chr3R_21935001 CanS-JC 2088 chr3R 21952129 21952163 chr3R 21952240 21952274 14 111 5.0 3.5 4.2 2.7 145 chr3R 21952129 intron Eip93F + chr3R 21952202 intron Eip93F + chr3R 21952274 intron Eip93F + chr3R_14_21950001 chr3R_21950001 CanS-JC 2089 chr3R 22055535 22055589 chr3R 22055750 22055804 14 215 3.0 2.0 2.5 4.0 269 chr3R 22055535 intron how + chr3R 22055670 intron how + chr3R 22055804 intron how + chr3R_14_22055001 chr3R_22055001 CanS-JC 2090 chr3R 22069799 22069857 chr3R 22069920 22069978 17 121 2.5 2.0 2.2 5.3 179 chr3R 22069799 intron how + chr3R 22069888 intron how + chr3R 22069978 intron how + chr3R_17_22065001 chr3R_22065001 CanS-JC 2091 chr3R 22084609 22084625 chr3R 22084724 22084735 8 114 2.5 8.5 5.5 1.2 126 chr3R 22084609 intergenic not near genes chr3R 22084672 intergenic not near genes chr3R 22084735 intergenic not near genes chr3R_8_22080001 chr3R_22080001 CanS-JC 2092 chr3R 22144947 22145003 chr3R 22145135 22145171 19 186 4.0 3.5 3.8 4.0 224 chr3R 22144947 intron SKIP + chr3R 22145059 intron SKIP + chr3R 22145171 intron SKIP + chr3R_19_22145001 chr3R_22145001 CanS-JC 2093 chr3R 22153559 22153598 chr3R 22153665 22153704 7 106 6.0 6.5 6.2 1.0 145 chr3R 22153559 intron SKIP + chr3R 22153632 intron SKIP + chr3R 22153704 intron SKIP + chr3R_7_22150001 chr3R_22150001 CanS-JC 2094 chr3R 22234061 22234094 chr3R 22234164 22234197 6 103 7.0 7.5 7.2 0.7 136 chr3R 22234061 intron SKIP + chr3R 22234129 intron SKIP + chr3R 22234197 intron SKIP + chr3R_6_22230001 chr3R_22230001 CanS-JC 2095 chr3R 22234664 22234713 chr3R 22236009 22236058 pogo 17 1345 7.0 6.0 6.5 2.3 1394 chr3R 22234664 intron SKIP + chr3R 22235361 intron SKIP + chr3R 22236058 intron SKIP + chr3R_17_22235001 chr3R_22235001 CanS-JC 2096 chr3R 22239465 22239523 chr3R 22248551 22248597 roo 11 9079 4.5 1.0 2.8 2.9 9132 chr3R 22239465 intron SKIP + chr3R 22244031 intron SKIP + chr3R 22248597 intron SKIP + chr3R_11_22240001 chr3R_22240001 CanS-JC 2097 chr3R 22252800 22252845 chr3R 22252931 22252964 12 130 3.5 0.5 2.0 4.0 164 chr3R 22252800 intron SKIP + chr3R 22252882 intron SKIP + chr3R 22252964 intron SKIP + chr3R_12_22250001 chr3R_22250001 CanS-JC 2098 chr3R 22253838 22253880 chr3R 22253940 22253978 14 101 4.0 5.0 4.5 2.5 140 chr3R 22253838 intron SKIP + chr3R 22253908 intron SKIP + chr3R 22253978 intron SKIP + chr3R_14_22250001 chr3R_22250001 CanS-JC 2099 chr3R 22286120 22286162 chr3R 22286223 22286265 12 103 4.5 6.0 5.2 1.9 145 chr3R 22286120 intron SKIP + chr3R 22286192 intron SKIP + chr3R 22286265 intron SKIP + chr3R_12_22285001 chr3R_22285001 CanS-JC 2100 chr3R 22433071 22433095 chr3R 22433197 22433221 6 126 12.5 10.0 11.2 0.5 150 chr3R 22433071 intron CG13847 - chr3R 22433146 intron CG13847 - chr3R 22433221 intron CG13847 - chr3R_6_22430001 chr3R_22430001 CanS-JC 2101 chr3R 22437764 22437819 chr3R 22437880 22437935 13 116 0.5 4.0 2.2 4.1 171 chr3R 22437764 intergenic not near genes chr3R 22437850 intergenic not near genes chr3R 22437935 intergenic not near genes chr3R_13_22435001 chr3R_22435001 CanS-JC 2102 chr3R 22450522 22450571 chr3R 22453188 22453237 NOF 16 2666 4.0 3.5 3.8 3.3 2715 chr3R 22450522 intron CG34376 + chr3R 22451880 intron CG34376 + chr3R 22453237 intron CG34376 + chr3R_16_22450001 chr3R_22450001 CanS-JC 2103 chr3R 22538423 22538473 chr3R 22538534 22538584 15 111 4.5 4.5 4.5 2.7 161 chr3R 22538423 intron CG5326 - chr3R 22538504 intron CG5326 - chr3R 22538584 intron CG5326 - chr3R_15_22535001 chr3R_22535001 CanS-JC 2104 chr3R 22640683 22640731 chr3R 22640824 22640871 21 141 0.5 4.0 2.2 6.6 188 chr3R 22640683 intron wake + chr3R 22640777 intron wake + chr3R 22640871 intron wake + chr3R_21_22640001 chr3R_22640001 CanS-JC 2105 chr3R 22657653 22657693 chr3R 22657757 22657797 11 104 4.0 4.5 4.2 2.1 144 chr3R 22657653 intron wake + chr3R 22657725 intron wake + chr3R 22657797 intron wake + chr3R_11_22655001 chr3R_22655001 CanS-JC 2106 chr3R 22672296 22672325 chr3R 22672415 22672441 5 118 3.5 3.0 3.2 1.2 145 chr3R 22672296 intron wake + chr3R 22672368 intron wake + chr3R 22672441 intron wake + chr3R_5_22670001 chr3R_22670001 CanS-JC 2107 chr3R 22769065 22769125 chr3R 22769168 22769228 13 103 4.5 4.5 4.5 2.4 163 chr3R 22769065 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769146 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769228 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_13_22765001 chr3R_22765001 CanS-JC 2108 chr3R 22846765 22846800 chr3R 22847012 22847047 12 247 5.5 2.0 3.8 2.5 282 chr3R 22846765 intergenic CG4704 - chr3R 22846906 intergenic not near genes chr3R 22847047 intergenic not near genes chr3R_12_22845001 chr3R_22845001 CanS-JC 2109 chr3R 22880580 22880612 chr3R 22880683 22880715 8 103 10.0 8.0 9.0 0.8 135 chr3R 22880580 intergenic not near genes chr3R 22880648 intergenic not near genes chr3R 22880715 intergenic not near genes chr3R_8_22880001 chr3R_22880001 CanS-JC 2110 chr3R 22880907 22880960 chr3R 22881071 22881124 12 164 1.0 1.0 1.0 6.0 217 chr3R 22880907 intergenic not near genes chr3R 22881016 intergenic not near genes chr3R 22881124 intergenic not near genes chr3R_12_22880001 chr3R_22880001 CanS-JC 2111 chr3R 22881216 22881228 chr3R 22884947 22884959 Doc 5 3731 5.0 10.5 7.8 0.6 3743 chr3R 22881216 intergenic not near genes chr3R 22883088 intergenic not near genes chr3R 22884959 intergenic not near genes chr3R_5_22880001 chr3R_22880001 CanS-JC 2112 chr3R 22888996 22889040 chr3R 22889099 22889143 17 103 5.0 5.0 5.0 2.8 147 chr3R 22888996 intergenic not near genes chr3R 22889070 intergenic not near genes chr3R 22889143 intergenic not near genes chr3R_17_22885001 chr3R_22885001 CanS-JC 2113 chr3R 23385563 23385591 chr3R 23385711 23385739 8 148 4.0 2.5 3.2 1.9 176 chr3R 23385563 intergenic not near genes chr3R 23385651 intergenic not near genes chr3R 23385739 intergenic not near genes chr3R_8_23385001 chr3R_23385001 CanS-JC 2114 chr3R 23453659 23453705 chr3R 23453763 23453810 14 105 4.5 4.0 4.2 2.7 151 chr3R 23453659 intron CG4374 - chr3R 23453734 intron CG4374 - chr3R 23453810 intron CG4374 - chr3R_14_23450001 chr3R_23450001 CanS-JC 2115 chr3R 23476809 23476859 chr3R 23476915 23476928 15 103 1.5 7.0 4.2 2.9 119 chr3R 23476809 intergenic not near genes chr3R 23476868 intergenic not near genes chr3R 23476928 intergenic not near genes chr3R_15_23475001 chr3R_23475001 CanS-JC 2116 chr3R 23558372 23558422 chr3R 23560179 23560229 Bari1 27 1807 2.0 2.0 2.0 9.0 1857 chr3R 23558372 intron beat-IV + chr3R 23559300 intron beat-IV + chr3R 23560229 intron beat-IV + chr3R_27_23555001 chr3R_23555001 CanS-JC 2117 chr3R 23564416 23564463 chr3R 23564586 23564633 13 169 3.0 1.0 2.0 4.3 217 chr3R 23564416 intron beat-IV + chr3R 23564524 intron beat-IV + chr3R 23564633 intron beat-IV + chr3R_13_23560001 chr3R_23560001 CanS-JC 2118 chr3R 23684669 23684719 chr3R 23685181 23685231 roo 12 512 5.5 3.5 4.5 2.2 562 chr3R 23684669 exon CG18754 + chr3R 23684950 intron CG18754 + chr3R 23685231 exon CG18754 + chr3R_12_23680001 chr3R_23680001 CanS-JC 2119 chr3R 23714054 23714067 chr3R 23714167 23714180 5 113 8.0 0.0 4.0 1.0 126 chr3R 23714054 intron nau - chr3R 23714117 intron nau - chr3R 23714180 intron nau - chr3R_5_23710001 chr3R_23710001 CanS-JC 2120 chr3R 23725640 23725659 chr3R 23725762 23725781 4 122 5.5 2.5 4.0 0.8 141 chr3R 23725640 intron CG10365 + chr3R 23725710 intron CG10365 + chr3R 23725781 intron CG10365 + chr3R_4_23725001 chr3R_23725001 CanS-JC 2121 chr3R 23733108 23733159 chr3R 23733249 23733300 8 141 2.5 5.5 4.0 1.6 192 chr3R 23733108 intron Rpn9 - chr3R 23733204 intron Rpn9 - chr3R 23733300 5` UTR Rpn9 - chr3R_8_23730001 chr3R_23730001 CanS-JC 2122 chr3R 23835381 23835436 chr3R 23844557 23844610 roo 6 9176 4.0 1.0 2.5 1.7 9229 chr3R 23835381 intron CG34355 + chr3R 23839996 intron CG34355 + chr3R 23844610 intron CG34355 + chr3R_6_23835001 chr3R_23835001 CanS-JC 2123 chr3R 23851062 23851088 chr3R 23858755 23858781 opus 4 7693 7.0 1.0 4.0 0.8 7719 chr3R 23851062 3` UTR CG34355 + chr3R 23854922 intergenic not near genes chr3R 23858781 intergenic not near genes chr3R_4_23850001 chr3R_23850001 CanS-JC 2124 chr3R 23859273 23859284 chr3R 23859375 23859386 7 102 5.0 0.0 2.5 2.0 113 chr3R 23859273 intergenic not near genes chr3R 23859330 intergenic not near genes chr3R 23859386 intergenic not near genes chr3R_7_23855001 chr3R_23855001 CanS-JC 2125 chr3R 23873955 23873970 chr3R 23874064 23874079 7 109 9.0 11.5 10.2 0.6 124 chr3R 23873955 intron Pli - chr3R 23874017 intron Pli - chr3R 23874079 intron Pli - chr3R_7_23870001 chr3R_23870001 CanS-JC 2126 chr3R 23884281 23884314 chr3R 23884391 23884424 12 109 4.0 3.5 3.8 2.5 143 chr3R 23884281 intron Pli - chr3R 23884352 intron Pli - chr3R 23884424 intron Pli - chr3R_12_23880001 chr3R_23880001 CanS-JC 2127 chr3R 23944879 23944936 chr3R 23944990 23945047 12 111 5.5 3.0 4.2 2.3 168 chr3R 23944879 intron CG12268 - chr3R 23944963 intron CG12268 - chr3R 23945047 exon CG12268 - chr3R_12_23940001 chr3R_23940001 CanS-JC 2128 chr3R 23949020 23949070 chr3R 23949118 23949173 21 103 3.0 5.5 4.2 4.0 153 chr3R 23949020 intergenic not near genes chr3R 23949096 intergenic not near genes chr3R 23949173 intergenic not near genes chr3R_21_23945001 chr3R_23945001 CanS-JC 2129 chr3R 24011643 24011674 chr3R 24011752 24011783 10 109 5.5 1.0 3.2 2.4 140 chr3R 24011643 intron KrT95D - chr3R 24011713 intron KrT95D - chr3R 24011783 intron KrT95D - chr3R_10_24010001 chr3R_24010001 CanS-JC 2130 chr3R 24021604 24021653 chr3R 24021720 24021769 9 116 2.0 6.0 4.0 1.8 165 chr3R 24021604 intron KrT95D - chr3R 24021686 intron KrT95D - chr3R 24021769 intron KrT95D - chr3R_9_24020001 chr3R_24020001 CanS-JC 2131 chr3R 24072065 24072116 chr3R 24072529 24072578 jockey 6 462 4.0 0.0 2.0 2.0 513 chr3R 24072065 intron 4EHP - chr3R 24072322 intron 4EHP - chr3R 24072578 intron 4EHP - chr3R_6_24070001 chr3R_24070001 CanS-JC 2132 chr3R 24076893 24076942 chr3R 24078386 24078435 hobo 7 1493 5.5 7.0 6.2 1.0 1542 chr3R 24076893 intron 4EHP - chr3R 24077664 intron 4EHP - chr3R 24078435 intron 4EHP - chr3R_7_24075001 chr3R_24075001 CanS-JC 2133 chr3R 24624364 24624380 chr3R 24624479 24624495 6 115 3.0 7.5 5.2 1.0 131 chr3R 24624364 intron Syx18 - chr3R 24624430 intron Syx18 - chr3R 24624495 exon Syx18 - chr3R_6_24620001 chr3R_24620001 CanS-JC 2134 chr3R 24667579 24667615 chr3R 24667682 24667718 4 103 5.0 0.0 2.5 1.1 139 chr3R 24667579 intron slo + chr3R 24667648 intron slo + chr3R 24667718 intron slo + chr3R_4_24665001 chr3R_24665001 CanS-JC 2135 chr3R 24671198 24671251 chr3R 24671301 24671352 14 103 6.5 4.0 5.2 2.3 154 chr3R 24671198 intron slo + chr3R 24671275 intron slo + chr3R 24671352 intron slo + chr3R_14_24670001 chr3R_24670001 CanS-JC 2136 chr3R 24730068 24730092 chr3R 24732471 24732496 Doc 7 2404 9.0 0.0 4.5 1.3 2428 chr3R 24730068 intron tok + chr3R 24731282 intron tok + chr3R 24732496 intron tok + chr3R_7_24730001 chr3R_24730001 CanS-JC 2137 chr3R 24743011 24743057 chr3R 24743122 24743168 7 111 2.0 2.0 2.0 2.3 157 chr3R 24743011 intron tok + chr3R 24743090 intron tok + chr3R 24743168 exon tok + chr3R_7_24740001 chr3R_24740001 CanS-JC 2138 chr3R 24789957 24790009 chr3R 24790128 24790180 12 168 4.0 1.0 2.5 3.4 223 chr3R 24789957 intron,5` UTR Ets96B +,CG13634 - chr3R 24790068 intron,5` UTR Ets96B +,CG13634 - chr3R 24790180 intron Ets96B + chr3R_12_24790001 chr3R_24790001 CanS-JC 2139 chr3R 24854867 24854912 chr3R 24854975 24855020 10 108 2.5 7.5 5.0 1.7 153 chr3R 24854867 3` UTR,3` UTR nct +,HdacX - chr3R 24854944 3` UTR HdacX - chr3R 24855020 3` UTR HdacX - chr3R_10_24850001 chr3R_24850001 CanS-JC 2140 chr3R 24908171 24908201 chr3R 24908300 24908330 7 129 5.5 9.0 7.2 0.9 159 chr3R 24908171 intergenic not near genes chr3R 24908250 intergenic not near genes chr3R 24908330 intergenic not near genes chr3R_7_24905001 chr3R_24905001 CanS-JC 2141 chr3R 24912457 24912510 chr3R 24912565 24912618 13 108 4.0 4.5 4.2 2.5 161 chr3R 24912457 intergenic not near genes chr3R 24912538 intergenic CR44267 + chr3R 24912618 intergenic CR44267 + chr3R_13_24910001 chr3R_24910001 CanS-JC 2142 chr3R 24927108 24927147 chr3R 24931925 24931964 Doc 13 4817 6.5 8.5 7.5 1.5 4856 chr3R 24927108 intergenic Trf4-2 + chr3R 24929536 intergenic not near genes chr3R 24931964 intergenic CG11771 + chr3R_13_24925001 chr3R_24925001 CanS-JC 2143 chr3R 25004901 25004919 chr3R 25005007 25005028 5 108 2.0 8.0 5.0 0.8 127 chr3R 25004901 intron tnc + chr3R 25004964 intron tnc + chr3R 25005028 intron tnc + chr3R_5_25000001 chr3R_25000001 CanS-JC 2144 chr3R 25018233 25018287 chr3R 25018336 25018390 15 102 9.5 3.5 6.5 2.0 157 chr3R 25018233 exon tnc + chr3R 25018312 exon tnc + chr3R 25018390 exon tnc + chr3R_15_25015001 chr3R_25015001 CanS-JC 2145 chr3R 25136387 25136420 chr3R 25136493 25136526 9 106 1.5 8.5 5.0 1.5 139 chr3R 25136387 3` UTR Bili + chr3R 25136456 3` UTR Bili + chr3R 25136526 3` UTR Bili + chr3R_9_25135001 chr3R_25135001 CanS-JC 2146 chr3R 25209576 25209615 chr3R 25209684 25209723 9 108 0.0 3.5 1.8 3.2 147 chr3R 25209576 intron CG13654 + chr3R 25209650 intron CG13654 + chr3R 25209723 intron CG13654 + chr3R_9_25205001 chr3R_25205001 CanS-JC 2147 chr3R 25235796 25235841 chr3R 25235902 25235947 9 106 2.5 4.0 3.2 2.1 151 chr3R 25235796 intergenic CG10420 - chr3R 25235872 intergenic CG10420 - chr3R 25235947 intergenic CG10420 - chr3R_9_25235001 chr3R_25235001 CanS-JC 2148 chr3R 25725810 25725854 chr3R 25734996 25735037 roo 7 9186 5.5 6.5 6.0 1.0 9227 chr3R 25725810 intron LpR2 - chr3R 25730424 intron LpR2 - chr3R 25735037 intron LpR2 - chr3R_7_25730001 chr3R_25730001 CanS-JC 2149 chr3R 25832669 25832710 chr3R 25841877 25841918 roo 16 9208 3.5 4.5 4.0 3.2 9249 chr3R 25832669 exon alpha4GT2 + chr3R 25837294 intron alpha4GT2 + chr3R 25841918 exon alpha4GT2 + chr3R_16_25835001 chr3R_25835001 CanS-JC 2150 chr3R 25843612 25843654 chr3R 25843768 25843810 8 156 7.0 2.0 4.5 1.5 198 chr3R 25843612 intergenic CR45653 + chr3R 25843711 intergenic CR45653 + chr3R 25843810 intergenic CR45653 + chr3R_8_25840001 chr3R_25840001 CanS-JC 2151 chr3R 25920826 25920877 chr3R 25920933 25920983 7 107 5.5 2.0 3.8 1.5 157 chr3R 25920826 exon CG42235 + chr3R 25920904 3` UTR CG42235 + chr3R 25920983 3` UTR CG42235 + chr3R_7_25920001 chr3R_25920001 CanS-JC 2152 chr3R 26023917 26023960 chr3R 26024030 26024073 13 113 7.0 5.5 6.2 1.8 156 chr3R 26023917 3` UTR E(spl)m4-BFM - chr3R 26023995 3` UTR E(spl)m4-BFM - chr3R 26024073 exon E(spl)m4-BFM - chr3R_13_26020001 chr3R_26020001 CanS-JC 2153 chr3R 26108805 26108817 chr3R 26117414 26117426 Tirant 8 8609 8.0 0.0 4.0 1.6 8621 chr3R 26108805 5` UTR CG31324 + chr3R 26113116 intron CG31324 + chr3R 26117426 intron CG31324 + chr3R_8_26110001 chr3R_26110001 CanS-JC 2154 chr3R 26126525 26126570 chr3R 26126637 26126682 6 112 3.0 9.5 6.2 0.8 157 chr3R 26126525 intron CG31324 + chr3R 26126604 intron CG31324 + chr3R 26126682 intron,5` UTR CG31324 +,CG14556 + chr3R_6_26125001 chr3R_26125001 CanS-JC 2155 chr3R 26132706 26132761 chr3R 26132852 26132907 15 145 8.0 5.5 6.8 1.9 201 chr3R 26132706 intergenic CG6142 + chr3R 26132806 intergenic CG6142 + chr3R 26132907 intergenic CG6142 + chr3R_15_26130001 chr3R_26130001 CanS-JC 2156 chr3R 26159601 26159650 chr3R 26159715 26159765 26 115 7.5 3.0 5.2 4.2 164 chr3R 26159601 intergenic not near genes chr3R 26159683 intergenic not near genes chr3R 26159765 intergenic not near genes chr3R_26_26155001 chr3R_26155001 CanS-JC 2157 chr3R 26292088 26292131 chr3R 26292194 26292237 12 106 4.0 6.0 5.0 2.0 149 chr3R 26292088 intergenic not near genes chr3R 26292162 intergenic not near genes chr3R 26292237 intergenic not near genes chr3R_12_26290001 chr3R_26290001 CanS-JC 2158 chr3R 26342373 26342423 chr3R 26342877 26342927 14 504 1.0 2.5 1.8 5.0 554 chr3R 26342373 intron CG33970 + chr3R 26342650 intron CG33970 + chr3R 26342927 intron CG33970 + chr3R_14_26340001 chr3R_26340001 CanS-JC 2159 chr3R 26349250 26349262 chr3R 26349372 26349384 4 122 8.5 0.0 4.2 0.8 134 chr3R 26349250 intron CG33970 + chr3R 26349317 intron CG33970 + chr3R 26349384 intron CG33970 + chr3R_4_26345001 chr3R_26345001 CanS-JC 2160 chr3R 26368402 26368454 chr3R 26369059 26369112 11 658 6.5 5.5 6.0 1.6 710 chr3R 26368402 intergenic not near genes chr3R 26368757 intergenic not near genes chr3R 26369112 intergenic not near genes chr3R_11_26365001 chr3R_26365001 CanS-JC 2161 chr3R 26376301 26376334 chr3R 26385487 26385520 roo 5 9186 12.5 0.0 6.2 0.7 9219 chr3R 26376301 intergenic not near genes chr3R 26380910 intergenic not near genes chr3R 26385520 intergenic not near genes chr3R_5_26380001 chr3R_26380001 CanS-JC 2162 chr3R 26458186 26458226 chr3R 26458297 26458337 5 111 7.5 4.0 5.8 0.7 151 chr3R 26458186 intergenic CG14238 + chr3R 26458262 5` UTR CG14238 + chr3R 26458337 5` UTR CG14238 + chr3R_5_26455001 chr3R_26455001 CanS-JC 2163 chr3R 26463752 26463808 chr3R 26463951 26464007 19 199 6.0 3.0 4.5 3.5 255 chr3R 26463752 intron CG5455 + chr3R 26463880 intron CG5455 + chr3R 26464007 intron CG5455 + chr3R_19_26460001 chr3R_26460001 CanS-JC 2164 chr3R 26468259 26468296 chr3R 26472856 26472893 14 4597 32.5 24.0 28.2 0.5 4634 chr3R 26468259 exon CG5455 + chr3R 26470576 3` UTR plum - chr3R 26472893 3` UTR plum - chr3R_14_26470001 chr3R_26470001 CanS-JC 2165 chr3R 26482337 26482387 chr3R 26482441 26482490 10 102 5.0 8.5 6.8 1.3 153 chr3R 26482337 intron plum - chr3R 26482414 intron plum - chr3R 26482490 intron plum - chr3R_10_26480001 chr3R_26480001 CanS-JC 2166 chr3R 26510225 26510279 chr3R 26510363 26510417 32 138 2.0 2.5 2.2 10.0 192 chr3R 26510225 intron plum - chr3R 26510321 intron plum - chr3R 26510417 intron plum - chr3R_32_26510001 chr3R_26510001 CanS-JC 2167 chr3R 26510506 26510532 chr3R 26519587 26519613 roo 9 9081 2.0 4.5 3.2 2.1 9107 chr3R 26510506 intron plum - chr3R 26515060 intron plum - chr3R 26519613 intron,5` UTR plum -,CR45226 + chr3R_9_26515001 chr3R_26515001 CanS-JC 2168 chr3R 26545993 26546023 chr3R 26546201 26546231 13 208 1.5 4.5 3.0 3.2 238 chr3R 26545993 intron scrib + chr3R 26546112 intron scrib + chr3R 26546231 intron scrib + chr3R_13_26545001 chr3R_26545001 CanS-JC 2169 chr3R 26558300 26558353 chr3R 26565639 26565691 Stalker4 15 7339 4.0 4.5 4.2 2.9 7391 chr3R 26558300 intron scrib + chr3R 26561996 intron scrib + chr3R 26565691 intron scrib + chr3R_15_26560001 chr3R_26560001 CanS-JC 2170 chr3R 26607714 26607759 chr3R 26607816 26607861 12 102 9.5 8.0 8.8 1.2 147 chr3R 26607714 5` UTR CR44951 + chr3R 26607788 5` UTR CR44951 + chr3R 26607861 5` UTR CR44951 + chr3R_12_26605001 chr3R_26605001 CanS-JC 2171 chr3R 26641613 26641664 chr3R 26641726 26641777 19 113 6.0 9.0 7.5 2.2 164 chr3R 26641613 intergenic not near genes chr3R 26641695 intergenic not near genes chr3R 26641777 intergenic not near genes chr3R_19_26640001 chr3R_26640001 CanS-JC 2172 chr3R 26642724 26642755 chr3R 26643143 26643175 jockey 12 420 6.0 3.5 4.8 2.1 451 chr3R 26642724 intergenic not near genes chr3R 26642950 intergenic not near genes chr3R 26643175 intergenic not near genes chr3R_12_26640001 chr3R_26640001 CanS-JC 2173 chr3R 26669640 26669690 chr3R 26669748 26669798 11 107 5.0 2.0 3.5 2.4 158 chr3R 26669640 intron beat-VII - chr3R 26669719 intron beat-VII - chr3R 26669798 intron beat-VII - chr3R_11_26665001 chr3R_26665001 CanS-JC 2174 chr3R 26710804 26710857 chr3R 26710914 26710967 17 109 4.5 2.0 3.2 4.0 163 chr3R 26710804 intron amon - chr3R 26710886 intron amon - chr3R 26710967 intron amon - chr3R_17_26710001 chr3R_26710001 CanS-JC 2175 chr3R 26752162 26752214 chr3R 26752271 26752323 10 108 4.5 7.0 5.8 1.5 161 chr3R 26752162 intergenic not near genes chr3R 26752242 intergenic not near genes chr3R 26752323 intergenic not near genes chr3R_10_26750001 chr3R_26750001 CanS-JC 2176 chr3R 26770218 26770269 chr3R 26770321 26770372 6 103 2.5 2.0 2.2 1.9 154 chr3R 26770218 intergenic CR45563 + chr3R 26770295 intergenic CR45563 + chr3R 26770372 intergenic not near genes chr3R_6_26770001 chr3R_26770001 CanS-JC 2177 chr3R 26810529 26810581 chr3R 26811040 26811092 roo 12 511 4.5 2.0 3.2 2.9 563 chr3R 26810529 intron Tl + chr3R 26810810 intron Tl + chr3R 26811092 intron Tl + chr3R_12_26810001 chr3R_26810001 CanS-JC 2178 chr3R 26816717 26816760 chr3R 26816836 26816878 11 118 7.5 7.0 7.2 1.3 161 chr3R 26816717 intron Tl + chr3R 26816798 intron Tl + chr3R 26816878 intron Tl + chr3R_11_26815001 chr3R_26815001 CanS-JC 2179 chr3R 26845546 26845600 chr3R 26845652 26845706 21 106 4.0 3.5 3.8 4.4 160 chr3R 26845546 intron Lerp - chr3R 26845626 intron Lerp - chr3R 26845706 intron Lerp - chr3R_21_26845001 chr3R_26845001 CanS-JC 2180 chr3R 26898214 26898268 chr3R 26898328 26898382 14 113 3.0 5.0 4.0 2.8 168 chr3R 26898214 intron T48 + chr3R 26898298 intron T48 + chr3R 26898382 intron T48 + chr3R_14_26895001 chr3R_26895001 CanS-JC 2181 chr3R 26917272 26917318 chr3R 26917381 26917427 13 109 4.0 4.5 4.2 2.5 155 chr3R 26917272 intron sda + chr3R 26917350 intron sda + chr3R 26917427 intron sda + chr3R_13_26915001 chr3R_26915001 CanS-JC 2182 chr3R 27007390 27007425 chr3R 27016551 27016586 roo 8 9161 5.0 4.0 4.5 1.5 9196 chr3R 27007390 intron RYa-R + chr3R 27011988 intron RYa-R + chr3R 27016586 intron RYa-R + chr3R_8_27010001 chr3R_27010001 CanS-JC 2183 chr3R 27019487 27019541 chr3R 27019609 27019663 12 122 4.0 6.5 5.2 1.9 176 chr3R 27019487 intron,exon RYa-R +,CG17191 - chr3R 27019575 intron,exon RYa-R +,CG17191 - chr3R 27019663 intron,intron RYa-R +,CG17191 - chr3R_12_27015001 chr3R_27015001 CanS-JC 2184 chr3R 27027655 27027688 chr3R 27027765 27027767 8 106 3.5 3.5 3.5 1.8 112 chr3R 27027655 intron RYa-R + chr3R 27027711 intron RYa-R + chr3R 27027767 intron RYa-R + chr3R_8_27025001 chr3R_27025001 CanS-JC 2185 chr3R 27028703 27028755 chr3R 27028808 27028860 12 105 0.5 2.5 1.5 4.8 157 chr3R 27028703 intron RYa-R + chr3R 27028782 intron RYa-R + chr3R 27028860 intron RYa-R + chr3R_12_27025001 chr3R_27025001 CanS-JC 2186 chr3R 27140494 27140540 chr3R 27148130 27148176 412 16 7636 7.5 6.5 7.0 2.0 7682 chr3R 27140494 intron CG6051 - chr3R 27144335 intron CG6051 - chr3R 27148176 intron CG6051 - chr3R_16_27140001 chr3R_27140001 CanS-JC 2187 chr3R 27211620 27211672 chr3R 27211979 27212032 18 360 4.0 5.0 4.5 3.3 412 chr3R 27211620 intergenic not near genes chr3R 27211826 intergenic not near genes chr3R 27212032 intergenic not near genes chr3R_18_27210001 chr3R_27210001 CanS-JC 2188 chr3R 27301253 27301306 chr3R 27301366 27301419 16 113 1.0 2.0 1.5 6.4 166 chr3R 27301253 intron CG3339 - chr3R 27301336 intron CG3339 - chr3R 27301419 intron CG3339 - chr3R_16_27300001 chr3R_27300001 CanS-JC 2189 chr3R 27335933 27335962 chr3R 27336040 27336069 8 107 2.0 0.0 1.0 4.0 136 chr3R 27335933 intergenic not near genes chr3R 27336001 intergenic not near genes chr3R 27336069 intergenic not near genes chr3R_8_27335001 chr3R_27335001 CanS-JC 2190 chr3R 27342770 27342814 chr3R 27351377 27351421 Tirant 12 8607 5.0 2.5 3.8 2.5 8651 chr3R 27342770 intron CG42534 + chr3R 27347096 intron CG42534 + chr3R 27351421 intron CG42534 + chr3R_12_27345001 chr3R_27345001 CanS-JC 2191 chr3R 27385673 27385718 chr3R 27385970 27386015 16 296 5.5 6.5 6.0 2.3 342 chr3R 27385673 intron side - chr3R 27385844 intron side - chr3R 27386015 intron side - chr3R_16_27385001 chr3R_27385001 CanS-JC 2192 chr3R 27445239 27445266 chr3R 27445341 27445369 5 103 3.5 4.5 4.0 1.0 130 chr3R 27445239 intergenic not near genes chr3R 27445304 intergenic not near genes chr3R 27445369 intergenic not near genes chr3R_5_27445001 chr3R_27445001 CanS-JC 2193 chr3R 27452563 27452601 chr3R 27452769 27452807 10 206 7.0 5.5 6.2 1.4 244 chr3R 27452563 intergenic not near genes chr3R 27452685 intergenic not near genes chr3R 27452807 intergenic not near genes chr3R_10_27450001 chr3R_27450001 CanS-JC 2194 chr3R 27496567 27496603 chr3R 27496698 27496734 10 131 5.5 2.5 4.0 2.0 167 chr3R 27496567 intergenic not near genes chr3R 27496650 intergenic not near genes chr3R 27496734 intergenic not near genes chr3R_10_27495001 chr3R_27495001 CanS-JC 2195 chr3R 27706752 27706797 chr3R 27706855 27706900 9 103 5.5 5.0 5.2 1.5 148 chr3R 27706752 intergenic CG12428 -,CG12877 + chr3R 27706826 intergenic CG12428 -,CG12877 + chr3R 27706900 intergenic CG12428 -,CG12877 + chr3R_9_27705001 chr3R_27705001 CanS-JC 2196 chr3R 27725546 27725590 chr3R 27731014 27731058 I-element 4 5468 3.5 6.0 4.8 0.7 5512 chr3R 27725546 intergenic not near genes chr3R 27728302 intergenic not near genes chr3R 27731058 intergenic not near genes chr3R_4_27725001 chr3R_27725001 CanS-JC 2197 chr3R 27779242 27779284 chr3R 27779348 27779390 13 106 0.5 7.0 3.8 2.7 148 chr3R 27779242 exon CG34353 - chr3R 27779316 intron CG34353 - chr3R 27779390 intron CG34353 - chr3R_13_27775001 chr3R_27775001 CanS-JC 2198 chr3R 27799915 27799962 chr3R 27800023 27800070 12 108 7.0 2.0 4.5 2.2 155 chr3R 27799915 intron CG34353 - chr3R 27799992 intron CG34353 - chr3R 27800070 intron CG34353 - chr3R_12_27795001 chr3R_27795001 CanS-JC 2199 chr3R 27856743 27856783 chr3R 27858252 27858292 hopper2 10 1509 6.0 6.0 6.0 1.4 1549 chr3R 27856743 intron CG34353 - chr3R 27857518 intron CG34353 - chr3R 27858292 intron CG34353 - chr3R_10_27855001 chr3R_27855001 CanS-JC 2200 chr3R 27861098 27861121 chr3R 27861200 27861223 8 102 2.0 13.0 7.5 0.9 125 chr3R 27861098 intron CG34353 - chr3R 27861160 intron CG34353 - chr3R 27861223 intron CG34353 - chr3R_8_27860001 chr3R_27860001 CanS-JC 2201 chr3R 27862938 27862984 chr3R 27868269 27868315 Transpac 12 5328 2.5 8.0 5.2 1.9 5377 chr3R 27862938 intron CG34353 - chr3R 27865626 intron CG34353 - chr3R 27868315 intron CG34353 - chr3R_12_27865001 chr3R_27865001 CanS-JC 2202 chr3R 27871038 27871085 chr3R 27871165 27871212 14 125 3.0 4.5 3.8 2.9 174 chr3R 27871038 intron CG34353 - chr3R 27871125 intron CG34353 - chr3R 27871212 intron CG34353 - chr3R_14_27870001 chr3R_27870001 CanS-JC 2203 chr3R 27941647 27941686 chr3R 27941770 27941810 18 123 5.0 3.0 4.0 3.6 163 chr3R 27941647 exon CG5514 + chr3R 27941728 exon CG5514 + chr3R 27941810 exon CG5514 + chr3R_18_27940001 chr3R_27940001 CanS-JC 2204 chr3R 27973830 27973881 chr3R 27973937 27973988 13 107 6.0 4.5 5.2 2.1 158 chr3R 27973830 intron betaTub97EF - chr3R 27973909 intron betaTub97EF - chr3R 27973988 intron betaTub97EF - chr3R_13_27970001 chr3R_27970001 CanS-JC 2205 chr3R 28068476 28068519 chr3R 28073944 28073987 I-element 11 5468 0.5 4.5 2.5 3.1 5511 chr3R 28068476 intron CG34362 + chr3R 28071232 intron CG34362 + chr3R 28073987 intron CG34362 + chr3R_11_28070001 chr3R_28070001 CanS-JC 2206 chr3R 28173655 28173701 chr3R 28181111 28181157 mdg1 12 7456 3.0 5.0 4.0 2.4 7502 chr3R 28173655 intron CG34354 + chr3R 28177406 intron CG34354 + chr3R 28181157 intron CG34354 + chr3R_12_28175001 chr3R_28175001 CanS-JC 2207 chr3R 28253318 28253364 chr3R 28255854 28255900 jockey 12 2536 5.0 5.5 5.2 1.9 2582 chr3R 28253318 intergenic not near genes chr3R 28254609 intergenic not near genes chr3R 28255900 intergenic not near genes chr3R_12_28250001 chr3R_28250001 CanS-JC 2208 chr3R 28262650 28262681 chr3R 28262752 28262783 13 102 8.0 3.5 5.8 1.9 133 chr3R 28262650 intergenic CG43125 - chr3R 28262716 intergenic CG43125 - chr3R 28262783 exon CG43125 - chr3R_13_28260001 chr3R_28260001 CanS-JC 2209 chr3R 28302079 28302112 chr3R 28302547 28302580 jockey 4 468 5.0 6.5 5.8 0.6 501 chr3R 28302079 intergenic not near genes chr3R 28302330 intergenic not near genes chr3R 28302580 intergenic not near genes chr3R_4_28300001 chr3R_28300001 CanS-JC 2210 chr3R 28308046 28308079 chr3R 28308149 28308179 12 103 9.0 10.0 9.5 1.1 133 chr3R 28308046 intergenic not near genes chr3R 28308112 intergenic not near genes chr3R 28308179 intergenic not near genes chr3R_12_28305001 chr3R_28305001 CanS-JC 2211 chr3R 28344057 28344080 chr3R 28344160 28344183 6 103 12.0 7.0 9.5 0.6 126 chr3R 28344057 exon Moca-cyp + chr3R 28344120 exon Moca-cyp + chr3R 28344183 exon Moca-cyp + chr3R_6_28340001 chr3R_28340001 CanS-JC 2212 chr3R 28345621 28345671 chr3R 28345723 28345773 8 102 3.0 1.5 2.2 2.5 152 chr3R 28345621 intergenic Moca-cyp + chr3R 28345697 intergenic not near genes chr3R 28345773 intergenic not near genes chr3R_8_28345001 chr3R_28345001 CanS-JC 2213 chr3R 28351991 28352046 chr3R 28352096 28352151 15 105 2.0 3.5 2.8 3.9 160 chr3R 28351991 intergenic Or98b + chr3R 28352071 intergenic Or98b + chr3R 28352151 intergenic Or98b + chr3R_15_28350001 chr3R_28350001 CanS-JC 2214 chr3R 28352493 28352542 chr3R 28352859 28352908 15 366 5.0 7.0 6.0 2.1 415 chr3R 28352493 exon Or98b + chr3R 28352700 exon Or98b + chr3R 28352908 exon Or98b + chr3R_15_28350001 chr3R_28350001 CanS-JC 2215 chr3R 28360838 28360897 chr3R 28360941 28360999 22 100 1.5 1.5 1.5 8.8 161 chr3R 28360838 intergenic not near genes chr3R 28360918 intergenic not near genes chr3R 28360999 intergenic not near genes chr3R_22_28360001 chr3R_28360001 CanS-JC 2216 chr3R 28380767 28380825 chr3R 28381027 28381085 21 260 4.0 6.0 5.0 3.5 318 chr3R 28380767 intergenic not near genes chr3R 28380926 intergenic not near genes chr3R 28381085 intergenic not near genes chr3R_21_28380001 chr3R_28380001 CanS-JC 2217 chr3R 28393671 28393730 chr3R 28393797 28393856 19 126 4.0 3.0 3.5 4.2 185 chr3R 28393671 intergenic not near genes chr3R 28393764 intergenic not near genes chr3R 28393856 intergenic not near genes chr3R_19_28390001 chr3R_28390001 CanS-JC 2218 chr3R 28415703 28415753 chr3R 28415814 28415864 13 111 6.0 4.5 5.2 2.1 161 chr3R 28415703 intergenic not near genes chr3R 28415784 intergenic not near genes chr3R 28415864 intergenic not near genes chr3R_13_28415001 chr3R_28415001 CanS-JC 2219 chr3R 28421640 28421683 chr3R 28421754 28421797 13 114 7.5 6.5 7.0 1.6 157 chr3R 28421640 intron beat-VI + chr3R 28421718 intron beat-VI + chr3R 28421797 intron beat-VI + chr3R_13_28420001 chr3R_28420001 CanS-JC 2220 chr3R 28432796 28432846 chr3R 28432900 28432950 12 104 3.5 7.0 5.2 1.9 154 chr3R 28432796 intron beat-VI + chr3R 28432873 intron beat-VI + chr3R 28432950 intron beat-VI + chr3R_12_28430001 chr3R_28430001 CanS-JC 2221 chr3R 28594080 28594128 chr3R 28594185 28594233 13 105 2.5 2.5 2.5 3.7 153 chr3R 28594080 5` UTR CR43440 + chr3R 28594156 5` UTR CR43440 + chr3R 28594233 5` UTR CR43440 + chr3R_13_28590001 chr3R_28590001 CanS-JC 2222 chr3R 28616447 28616503 chr3R 28616567 28616623 19 118 5.0 5.5 5.2 3.1 176 chr3R 28616447 intron CG10011 - chr3R 28616535 intron CG10011 - chr3R 28616623 intron CG10011 - chr3R_19_28615001 chr3R_28615001 CanS-JC 2223 chr3R 28638895 28638943 chr3R 28640205 28640253 13 1310 21.0 20.0 20.5 0.6 1358 chr3R 28638895 intergenic CG9988 + chr3R 28639574 intergenic not near genes chr3R 28640253 intergenic not near genes chr3R_13_28635001 chr3R_28635001 CanS-JC 2224 chr3R 28637818 28637875 chr3R 28640267 28640324 10 2454 36.5 23.5 30.0 0.3 2506 chr3R 28637818 exon CG9988 + chr3R 28639071 intergenic CG9988 + chr3R 28640324 intergenic not near genes chr3R_10_28635001 chr3R_28635001 CanS-JC 2225 chr3R 28652230 28652254 chr3R 28652385 28652408 6 155 6.5 3.0 4.8 1.0 178 chr3R 28652230 intergenic not near genes chr3R 28652319 intergenic not near genes chr3R 28652408 intergenic not near genes chr3R_6_28650001 chr3R_28650001 CanS-JC 2226 chr3R 28655367 28655406 chr3R 28655495 28655517 11 125 7.0 7.0 7.0 1.4 150 chr3R 28655367 intergenic not near genes chr3R 28655442 intergenic not near genes chr3R 28655517 intergenic not near genes chr3R_11_28655001 chr3R_28655001 CanS-JC 2227 chr3R 28671410 28671451 chr3R 28671560 28671601 12 150 7.0 3.0 5.0 2.0 191 chr3R 28671410 exon CG9989 + chr3R 28671506 exon CG9989 + chr3R 28671601 exon CG9989 + chr3R_12_28670001 chr3R_28670001 CanS-JC 2228 chr3R 28744589 28744613 chr3R 28744727 28744751 10 137 5.5 6.5 6.0 1.4 162 chr3R 28744589 5` UTR AstA-R2 - chr3R 28744670 5` UTR AstA-R2 - chr3R 28744751 5` UTR AstA-R2 - chr3R_10_28740001 chr3R_28740001 CanS-JC 2229 chr3R 28758266 28758278 chr3R 28763909 28763921 roo 5 5643 12.0 0.0 6.0 0.7 5655 chr3R 28758266 intergenic aqrs - chr3R 28761094 intergenic not near genes chr3R 28763921 intergenic not near genes chr3R_5_28760001 chr3R_28760001 CanS-JC 2230 chr3R 28792851 28792901 chr3R 28797971 28798022 jockey 20 5121 1.5 2.5 2.0 6.7 5171 chr3R 28792851 intergenic not near genes chr3R 28795436 intergenic not near genes chr3R 28798022 intergenic not near genes chr3R_20_28795001 chr3R_28795001 CanS-JC 2231 chr3R 21907534 21907536 chr3R 28831801 28831802 19 6924266 23.0 22.5 22.8 0.8 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_19_25365001 chr3R_25365001 CanS-JC 2232 chr3R 28862121 28862167 chr3R 28862224 28862270 7 103 4.0 3.0 3.5 1.6 149 chr3R 28862121 intron spg + chr3R 28862196 intron spg + chr3R 28862270 intron spg + chr3R_7_28860001 chr3R_28860001 CanS-JC 2233 chr3R 28950228 28950248 chr3R 28950335 28950355 7 106 4.5 2.0 3.2 1.7 127 chr3R 28950228 intron CG14521 - chr3R 28950292 intron CG14521 - chr3R 28950355 intron CG14521 - chr3R_7_28950001 chr3R_28950001 CanS-JC 2234 chr3R 28962103 28962155 chr3R 28962578 28962636 16 480 3.0 4.5 3.8 3.3 533 chr3R 28962103 intron CG14521 - chr3R 28962370 intron CG14521 - chr3R 28962636 intron CG14521 - chr3R_16_28960001 chr3R_28960001 CanS-JC 2235 chr3R 29032718 29032758 chr3R 29032821 29032861 9 102 4.0 3.5 3.8 1.9 143 chr3R 29032718 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032790 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032861 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_9_29030001 chr3R_29030001 CanS-JC 2236 chr3R 29048406 29048428 chr3R 29048571 29048600 11 171 6.0 5.5 5.8 1.6 194 chr3R 29048406 3` UTR Pkc98E + chr3R 29048503 3` UTR Pkc98E + chr3R 29048600 3` UTR Pkc98E + chr3R_11_29045001 chr3R_29045001 CanS-JC 2237 chr3R 29070033 29070071 chr3R 29070140 29070178 11 107 5.0 5.5 5.2 1.8 145 chr3R 29070033 intron CG11873 + chr3R 29070106 intron CG11873 + chr3R 29070178 intron CG11873 + chr3R_11_29070001 chr3R_29070001 CanS-JC 2238 chr3R 29079369 29079403 chr3R 29080767 29080801 NOF 13 1398 10.0 7.5 8.8 1.3 1432 chr3R 29079369 intron CG11873 + chr3R 29080085 intron CG11873 + chr3R 29080801 intron CG11873 + chr3R_13_29080001 chr3R_29080001 CanS-JC 2239 chr3R 29091408 29091432 chr3R 29091522 29091546 6 112 6.5 11.5 9.0 0.6 138 chr3R 29091408 intron CG11873 + chr3R 29091477 intron CG11873 + chr3R 29091546 intron CG11873 + chr3R_6_29090001 chr3R_29090001 CanS-JC 2240 chr3R 29092851 29092888 chr3R 29092976 29093013 10 125 11.0 6.5 8.8 1.0 162 chr3R 29092851 intron CG11873 + chr3R 29092932 intron CG11873 + chr3R 29093013 intron CG11873 + chr3R_10_29090001 chr3R_29090001 CanS-JC 2241 chr3R 29094725 29094732 chr3R 29094845 29094852 4 120 4.0 16.0 10.0 0.4 127 chr3R 29094725 intron CG11873 + chr3R 29094788 intron CG11873 + chr3R 29094852 intron CG11873 + chr3R_4_29090001 chr3R_29090001 CanS-JC 2242 chr3R 29183706 29183756 chr3R 29183808 29183858 14 102 7.0 7.0 7.0 1.8 152 chr3R 29183706 intron CG14509 - chr3R 29183782 intron CG14509 - chr3R 29183858 intron CG14509 - chr3R_14_29180001 chr3R_29180001 CanS-JC 2243 chr3R 29199396 29199428 chr3R 29199505 29199537 13 108 6.5 5.5 6.0 1.9 141 chr3R 29199396 intergenic CG14515 + chr3R 29199466 intergenic CG14515 + chr3R 29199537 intergenic CG14515 + chr3R_13_29195001 chr3R_29195001 CanS-JC 2244 chr3R 29237234 29237282 chr3R 29239281 29239292 15 2045 30.0 5.0 17.5 0.8 2058 chr3R 29237234 exon CG11951 - chr3R 29238263 intron CG11951 - chr3R 29239292 exon CG31427 - chr3R_15_29235001 chr3R_29235001 CanS-JC 2245 chr3R 29239205 29239248 chr3R 29245522 29245565 8 6316 2.5 28.0 15.2 0.5 6360 chr3R 29239205 exon CG31427 - chr3R 29242385 exon CG31445 - chr3R 29245565 exon SP1029 - chr3R_8_29240001 chr3R_29240001 CanS-JC 2246 chr3R 29240295 29240315 chr3R 29240405 29240425 8 110 4.5 0.0 2.2 2.5 130 chr3R 29240295 intron CG31427 - chr3R 29240360 5` UTR CG31427 - chr3R 29240425 intergenic CG31427 -,CG31445 - chr3R_8_29240001 chr3R_29240001 CanS-JC 2247 chr3R 29319809 29319828 chr3R 29320155 29320174 jockey 4 344 1.5 5.0 3.2 1.0 365 chr3R 29319809 intergenic Cnx99A - chr3R 29319992 intergenic Cnx99A - chr3R 29320174 intergenic not near genes chr3R_4_29315001 chr3R_29315001 CanS-JC 2248 chr3R 29432756 29432801 chr3R 29432859 29432904 18 102 5.0 5.0 5.0 3.0 148 chr3R 29432756 intron Ptp99A + chr3R 29432830 intron Ptp99A + chr3R 29432904 intron Ptp99A + chr3R_18_29430001 chr3R_29430001 CanS-JC 2249 chr3R 29447793 29447849 chr3R 29447926 29447982 8 133 4.5 7.0 5.8 1.2 189 chr3R 29447793 intron Ptp99A + chr3R 29447888 intron Ptp99A + chr3R 29447982 intron Ptp99A + chr3R_8_29445001 chr3R_29445001 CanS-JC 2250 chr3R 29449340 29449387 chr3R 29449444 29449491 19 104 8.0 5.5 6.8 2.4 151 chr3R 29449340 intron Ptp99A + chr3R 29449416 intron Ptp99A + chr3R 29449491 intron Ptp99A + chr3R_19_29445001 chr3R_29445001 CanS-JC 2251 chr3R 29471984 29472034 chr3R 29472103 29472153 19 119 2.5 2.5 2.5 5.4 169 chr3R 29471984 intron Ptp99A + chr3R 29472068 intron Ptp99A + chr3R 29472153 intron Ptp99A + chr3R_19_29470001 chr3R_29470001 CanS-JC 2252 chr3R 29539410 29539434 chr3R 29539512 29539536 7 102 7.0 0.0 3.5 1.6 126 chr3R 29539410 intergenic not near genes chr3R 29539473 intergenic not near genes chr3R 29539536 intergenic not near genes chr3R_7_29535001 chr3R_29535001 CanS-JC 2253 chr3R 29738245 29738293 chr3R 29739738 29739786 hobo 14 1493 5.5 5.0 5.2 2.3 1541 chr3R 29738245 intergenic CG1969 +,CG7598 + chr3R 29739016 intron CG1969 + chr3R 29739786 5` UTR CG1969 + chr3R_14_29735001 chr3R_29735001 CanS-JC 2254 chr3R 29758912 29758969 chr3R 29759016 29759073 20 104 7.5 4.0 5.8 2.9 161 chr3R 29758912 3` UTR CR44953 - chr3R 29758992 3` UTR CR44953 - chr3R 29759073 intergenic CR44953 - chr3R_20_29755001 chr3R_29755001 CanS-JC 2255 chr3R 29760336 29760379 chr3R 29761563 29761606 pogo 8 1227 5.0 1.0 3.0 2.0 1270 chr3R 29760336 intergenic not near genes chr3R 29760971 intergenic not near genes chr3R 29761606 intergenic not near genes chr3R_8_29760001 chr3R_29760001 CanS-JC 2256 chr3R 29881997 29882045 chr3R 29891180 29891228 roo 16 9183 5.5 4.0 4.8 2.8 9231 chr3R 29881997 intron CG31038 + chr3R 29886612 intron CG31038 + chr3R 29891228 intron CG31038 + chr3R_16_29885001 chr3R_29885001 CanS-JC 2257 chr3R 29950551 29950595 chr3R 29950654 29950698 8 103 2.5 7.0 4.8 1.4 147 chr3R 29950551 intergenic TkR99D - chr3R 29950624 intergenic TkR99D - chr3R 29950698 intergenic TkR99D - chr3R_8_29950001 chr3R_29950001 CanS-JC 2258 chr3R 29963465 29963512 chr3R 29963581 29963640 21 127 4.0 4.0 4.0 4.2 175 chr3R 29963465 intron TkR99D - chr3R 29963552 intron TkR99D - chr3R 29963640 intron TkR99D - chr3R_21_29960001 chr3R_29960001 CanS-JC 2259 chr3R 30028206 30028232 chr3R 30028327 30028353 11 121 2.0 3.0 2.5 3.1 147 chr3R 30028206 intron Axn + chr3R 30028280 intron Axn + chr3R 30028353 intron Axn + chr3R_11_30025001 chr3R_30025001 CanS-JC 2260 chr3R 30051285 30051307 chr3R 30051389 30051412 7 105 2.5 8.0 5.2 1.1 127 chr3R 30051285 intron,intron CG15528 -,CR44046 + chr3R 30051348 intron,intron CG15528 -,CR44046 + chr3R 30051412 intron,intron CG15528 -,CR44046 + chr3R_7_30050001 chr3R_30050001 CanS-JC 2261 chr3R 30081861 30081869 chr3R 30081965 30081973 5 104 1.5 8.5 5.0 0.8 112 chr3R 30081861 intron sima + chr3R 30081917 intron sima + chr3R 30081973 intron sima + chr3R_5_30080001 chr3R_30080001 CanS-JC 2262 chr3R 30084832 30084850 chr3R 30086325 30086343 hobo 9 1493 11.0 5.0 8.0 1.0 1511 chr3R 30084832 intron sima + chr3R 30085588 intron sima + chr3R 30086343 intron sima + chr3R_9_30085001 chr3R_30085001 CanS-JC 2263 chr3R 30084857 30084880 chr3R 30086319 30086367 hobo 15 1491 5.5 2.5 4.0 3.0 1510 chr3R 30084857 intron sima + chr3R 30085612 intron sima + chr3R 30086367 intron sima + chr3R_15_30085001 chr3R_30085001 CanS-JC 2264 chr3R 30123677 30123719 chr3R 30123780 30123822 12 103 4.0 3.0 3.5 2.7 145 chr3R 30123677 intergenic CG45073 -,CG45072 - chr3R 30123750 intergenic CG45073 -,CG45072 - chr3R 30123822 exon CG45073 - chr3R_12_30120001 chr3R_30120001 CanS-JC 2265 chr3R 30181336 30181370 chr3R 30181448 30181491 5 117 3.0 0.0 1.5 2.0 155 chr3R 30181336 3` UTR Bet5 + chr3R 30181414 3` UTR Bet5 + chr3R 30181491 intergenic Bet5 + chr3R_5_30180001 chr3R_30180001 CanS-JC 2266 chr3R 30201631 30201651 chr3R 30201741 30201761 10 110 0.0 1.5 0.8 5.6 130 chr3R 30201631 intron CG9743 - chr3R 30201696 intron CG9743 - chr3R 30201761 intron CG9743 - chr3R_10_30200001 chr3R_30200001 CanS-JC 2267 chr3R 30235726 30235757 chr3R 30235837 30235868 5 111 9.5 4.0 6.8 0.6 142 chr3R 30235726 intergenic not near genes chr3R 30235797 intergenic not near genes chr3R 30235868 intergenic not near genes chr3R_5_30235001 chr3R_30235001 CanS-JC 2268 chr3R 30238746 30238782 chr3R 30239936 30239972 1360 9 1190 4.5 9.5 7.0 1.1 1226 chr3R 30238746 intergenic not near genes chr3R 30239359 intergenic not near genes chr3R 30239972 intergenic not near genes chr3R_9_30235001 chr3R_30235001 CanS-JC 2269 chr3R 30267948 30267995 chr3R 30268060 30268107 4 112 5.0 3.5 4.2 0.8 159 chr3R 30267948 intergenic not near genes chr3R 30268028 intergenic not near genes chr3R 30268107 intergenic not near genes chr3R_4_30265001 chr3R_30265001 CanS-JC 2270 chr3R 30315612 30315620 chr3R 30315721 30315729 6 108 10.0 14.0 12.0 0.5 117 chr3R 30315612 intron hdc + chr3R 30315670 intron hdc + chr3R 30315729 intron hdc + chr3R_6_30315001 chr3R_30315001 CanS-JC 2271 chr3R 30317301 30317357 chr3R 30324919 30324975 roo 5 7618 1.0 4.5 2.8 1.3 7674 chr3R 30317301 intron hdc + chr3R 30321138 intron hdc + chr3R 30324975 intron hdc + chr3R_5_30320001 chr3R_30320001 CanS-JC 2272 chr3R 30330467 30330517 chr3R 30330573 30330623 7 106 9.5 3.5 6.5 0.9 156 chr3R 30330467 intron hdc + chr3R 30330545 intron hdc + chr3R 30330623 intron hdc + chr3R_7_30330001 chr3R_30330001 CanS-JC 2273 chr3R 30396194 30396236 chr3R 30404486 30404526 roo 11 8292 4.0 5.0 4.5 2.0 8332 chr3R 30396194 intergenic not near genes chr3R 30400360 intergenic not near genes chr3R 30404526 5` UTR CR45570 + chr3R_11_30400001 chr3R_30400001 CanS-JC 2274 chr3R 30434195 30434248 chr3R 30434298 30434352 13 103 5.0 4.5 4.8 2.2 157 chr3R 30434195 exon CG15534 + chr3R 30434274 exon CG15534 + chr3R 30434352 exon CG15534 + chr3R_13_30430001 chr3R_30430001 CanS-JC 2275 chr3R 30452129 30452184 chr3R 30452275 30452330 16 143 5.5 3.5 4.5 2.9 201 chr3R 30452129 intron aralar1 - chr3R 30452230 intron aralar1 - chr3R 30452330 intron aralar1 - chr3R_16_30450001 chr3R_30450001 CanS-JC 2276 chr3R 30456374 30456422 chr3R 30456480 30456528 17 104 2.0 2.0 2.0 5.7 154 chr3R 30456374 intergenic CG2224 - chr3R 30456451 3` UTR CG2224 - chr3R 30456528 3` UTR CG2224 - chr3R_17_30455001 chr3R_30455001 CanS-JC 2277 chr3R 30457992 30458043 chr3R 30458098 30458149 14 105 2.5 4.5 3.5 3.1 157 chr3R 30457992 intron CG2224 - chr3R 30458070 intron CG2224 - chr3R 30458149 intron CG2224 - chr3R_14_30455001 chr3R_30455001 CanS-JC 2278 chr3R 30480457 30480503 chr3R 30482951 30482997 jockey 15 2492 4.5 3.0 3.8 3.1 2540 chr3R 30480457 intron PH4alphaEFB + chr3R 30481727 intron PH4alphaEFB + chr3R 30482997 intron PH4alphaEFB + chr3R_15_30480001 chr3R_30480001 CanS-JC 2279 chr3R 30488101 30488114 chr3R 30488206 30488219 5 105 6.0 0.0 3.0 1.2 118 chr3R 30488101 intergenic Jon99Fii - chr3R 30488160 intergenic Jon99Fii - chr3R 30488219 intergenic Jon99Fii - chr3R_5_30485001 chr3R_30485001 CanS-JC 2280 chr3R 30521716 30521733 chr3R 30521831 30521848 4 115 4.5 0.0 2.2 1.2 132 chr3R 30521716 intron jdp - chr3R 30521782 intron jdp - chr3R 30521848 intron jdp - chr3R_4_30520001 chr3R_30520001 CanS-JC 2281 chr3R 30536474 30536500 chr3R 30536581 30536607 11 107 11.5 0.0 5.8 1.6 133 chr3R 30536474 intron tmod + chr3R 30536540 intron tmod + chr3R 30536607 intron tmod + chr3R_11_30535001 chr3R_30535001 CanS-JC 2282 chr3R 30539782 30539836 chr3R 30539885 30539939 9 101 5.0 5.0 5.0 1.5 157 chr3R 30539782 intron tmod + chr3R 30539860 intron tmod + chr3R 30539939 intron tmod + chr3R_9_30535001 chr3R_30535001 CanS-JC 2283 chr3R 30671760 30671808 chr3R 30671866 30671910 6 103 4.5 2.0 3.2 1.4 150 chr3R 30671760 intergenic not near genes chr3R 30671835 intergenic not near genes chr3R 30671910 intergenic not near genes chr3R_6_30670001 chr3R_30670001 CanS-JC 2284 chr3R 30677863 30677872 chr3R 30677997 30678006 6 134 3.5 6.0 4.8 1.0 143 chr3R 30677863 intergenic not near genes chr3R 30677934 intergenic not near genes chr3R 30678006 intergenic not near genes chr3R_6_30675001 chr3R_30675001 CanS-JC 2285 chr3R 30679492 30679549 chr3R 30686987 30687044 blood 10 7495 7.5 4.5 6.0 1.4 7552 chr3R 30679492 intergenic not near genes chr3R 30683268 intergenic not near genes chr3R 30687044 intergenic not near genes chr3R_10_30680001 chr3R_30680001 CanS-JC 2286 chr3R 30690135 30690189 chr3R 30690245 30690299 21 108 3.5 8.5 6.0 3.0 164 chr3R 30690135 intergenic not near genes chr3R 30690217 intergenic Spn100A + chr3R 30690299 intergenic Spn100A + chr3R_21_30690001 chr3R_30690001 CanS-JC 2287 chr3R 30700842 30700878 chr3R 30700991 30701021 9 148 0.5 0.0 0.2 7.5 179 chr3R 30700842 intergenic not near genes chr3R 30700932 intergenic not near genes chr3R 30701021 intergenic not near genes chr3R_9_30700001 chr3R_30700001 CanS-JC 2288 chr3R 30818790 30818834 chr3R 30820381 30820425 1360 13 1591 5.5 6.0 5.8 1.9 1635 chr3R 30818790 intron cindr + chr3R 30819608 intron cindr + chr3R 30820425 intron cindr + chr3R_13_30815001 chr3R_30815001 CanS-JC 2289 chr3R 30831693 30831698 chr3R 30831795 30831800 4 102 2.0 8.0 5.0 0.7 107 chr3R 30831693 intron CG15544 + chr3R 30831746 intron CG15544 + chr3R 30831800 intron CG15544 + chr3R_4_30830001 chr3R_30830001 CanS-JC 2290 chr3R 30859380 30859423 chr3R 30859484 30859527 14 104 3.5 3.0 3.2 3.3 147 chr3R 30859380 intergenic not near genes chr3R 30859454 intergenic not near genes chr3R 30859527 intergenic not near genes chr3R_14_30855001 chr3R_30855001 CanS-JC 2291 chr3R 30948052 30948108 chr3R 30948269 30948325 15 216 4.5 4.0 4.2 2.9 273 chr3R 30948052 intergenic not near genes chr3R 30948188 intergenic not near genes chr3R 30948325 intergenic not near genes chr3R_15_30945001 chr3R_30945001 CanS-JC 2292 chr3R 30953824 30953867 chr3R 30953951 30953994 12 126 2.5 7.5 5.0 2.0 170 chr3R 30953824 intergenic not near genes chr3R 30953909 intergenic not near genes chr3R 30953994 intergenic not near genes chr3R_12_30950001 chr3R_30950001 CanS-JC 2293 chr3R 30985661 30985714 chr3R 30985772 30985825 21 111 1.5 3.0 2.2 6.6 164 chr3R 30985661 intron 5-HT7 - chr3R 30985743 intron 5-HT7 - chr3R 30985825 intron 5-HT7 - chr3R_21_30985001 chr3R_30985001 CanS-JC 2294 chr3R 30993645 30993658 chr3R 30993752 30993765 6 106 3.5 0.5 2.0 2.0 120 chr3R 30993645 intron 5-HT7 - chr3R 30993705 intron 5-HT7 - chr3R 30993765 intron 5-HT7 - chr3R_6_30990001 chr3R_30990001 CanS-JC 2295 chr3R 31042084 31042140 chr3R 31042197 31042252 18 113 6.0 5.0 5.5 2.8 168 chr3R 31042084 intron CanA1 + chr3R 31042168 intron CanA1 + chr3R 31042252 intron CanA1 + chr3R_18_31040001 chr3R_31040001 CanS-JC 2296 chr3R 31074216 31074237 chr3R 31081840 31081861 springer 4 7624 8.0 8.5 8.2 0.4 7645 chr3R 31074216 intron Sox100B + chr3R 31078038 intron Sox100B + chr3R 31081861 intron Sox100B + chr3R_4_31075001 chr3R_31075001 CanS-JC 2297 chr3R 31137130 31137181 chr3R 31137236 31137287 21 106 4.5 7.0 5.8 3.1 157 chr3R 31137130 intron Gycbeta100B + chr3R 31137208 intron Gycbeta100B + chr3R 31137287 intron Gycbeta100B + chr3R_21_31135001 chr3R_31135001 CanS-JC 2298 chr3R 31279119 31279170 chr3R 31285817 31285868 diver 15 6698 1.0 2.5 1.8 5.4 6749 chr3R 31279119 intergenic not near genes chr3R 31282494 intergenic not near genes chr3R 31285868 intergenic not near genes chr3R_15_31280001 chr3R_31280001 CanS-JC 2299 chr3R 31378503 31378559 chr3R 31378881 31378937 20 377 4.0 3.0 3.5 4.4 434 chr3R 31378503 intergenic not near genes chr3R 31378720 intergenic not near genes chr3R 31378937 intergenic not near genes chr3R_20_31375001 chr3R_31375001 CanS-JC 2300 chr3R 31413072 31413100 chr3R 31418298 31418326 copia 7 5226 7.0 0.0 3.5 1.6 5254 chr3R 31413072 intron Gprk2 + chr3R 31415699 intron Gprk2 + chr3R 31418326 intron Gprk2 + chr3R_7_31415001 chr3R_31415001 CanS-JC 2301 chr3R 31426862 31426901 chr3R 31426980 31427019 14 118 4.5 5.0 4.8 2.4 157 chr3R 31426862 intron Gprk2 + chr3R 31426940 intron Gprk2 + chr3R 31427019 intron Gprk2 + chr3R_14_31425001 chr3R_31425001 CanS-JC 2302 chr3R 31435335 31435385 chr3R 31435513 31435563 21 178 2.0 5.0 3.5 4.7 228 chr3R 31435335 intron Gprk2 + chr3R 31435449 intron Gprk2 + chr3R 31435563 intron Gprk2 + chr3R_21_31435001 chr3R_31435001 CanS-JC 2303 chr3R 31450758 31450773 chr3R 31450899 31450957 17 144 37.0 38.0 37.5 0.4 199 chr3R 31450758 intron Gprk2 + chr3R 31450858 intron Gprk2 + chr3R 31450957 intron Gprk2 + chr3R_17_31450001 chr3R_31450001 CanS-JC 2304 chr3R 31453196 31453248 chr3R 31453300 31453352 19 104 4.0 3.0 3.5 4.2 156 chr3R 31453196 intron Gprk2 + chr3R 31453274 intron Gprk2 + chr3R 31453352 exon Gprk2 + chr3R_19_31450001 chr3R_31450001 CanS-JC 2305 chr3R 31643196 31643238 chr3R 31643301 31643343 14 105 2.5 5.0 3.8 2.9 147 chr3R 31643196 intron kek6 + chr3R 31643270 intron kek6 + chr3R 31643343 intron kek6 + chr3R_14_31640001 chr3R_31640001 CanS-JC 2306 chr3R 31691509 31691563 chr3R 31696301 31696355 Doc 24 4791 5.0 6.0 5.5 3.7 4846 chr3R 31691509 intergenic not near genes chr3R 31693932 intergenic not near genes chr3R 31696355 intergenic not near genes chr3R_24_31690001 chr3R_31690001 CanS-JC 2307 chr3R 31765373 31765407 chr3R 31765910 31765944 16 538 33.0 35.0 34.0 0.5 571 chr3R 31765373 intergenic not near genes chr3R 31765658 intergenic not near genes chr3R 31765944 intergenic not near genes chr3R_16_31765001 chr3R_31765001 CanS-JC 2308 chr3R 31808588 31808642 chr3R 31808690 31808744 17 102 6.0 6.5 6.2 2.4 156 chr3R 31808588 intron CG11576 - chr3R 31808666 intron CG11576 - chr3R 31808744 intron CG11576 - chr3R_17_31805001 chr3R_31805001 CanS-JC 2309 chr3R 31819298 31819348 chr3R 31819442 31819492 21 144 1.5 4.0 2.8 5.5 194 chr3R 31819298 intron RhoGAP100F + chr3R 31819395 intron RhoGAP100F + chr3R 31819492 intron RhoGAP100F + chr3R_21_31815001 chr3R_31815001 CanS-JC 2310 chr3R 31827243 31827250 chr3R 31827348 31827355 5 105 14.5 2.0 8.2 0.5 112 chr3R 31827243 intron RhoGAP100F + chr3R 31827299 intron RhoGAP100F + chr3R 31827355 intron RhoGAP100F + chr3R_5_31825001 chr3R_31825001 CanS-JC 2311 chr3R 31827258 31827297 chr3R 31827346 31827402 13 103 6.5 2.0 4.2 2.5 144 chr3R 31827258 intron RhoGAP100F + chr3R 31827330 intron RhoGAP100F + chr3R 31827402 intron RhoGAP100F + chr3R_13_31825001 chr3R_31825001 CanS-JC 2312 chr3R 31856958 31857005 chr3R 31857142 31857188 14 184 9.5 9.0 9.2 1.4 230 chr3R 31856958 intron heph - chr3R 31857073 intron heph - chr3R 31857188 intron heph - chr3R_14_31855001 chr3R_31855001 CanS-JC 2313 chr3R 31858746 31858776 chr3R 31858858 31858888 8 112 7.5 10.0 8.8 0.8 142 chr3R 31858746 intron heph - chr3R 31858817 intron heph - chr3R 31858888 intron heph - chr3R_8_31855001 chr3R_31855001 CanS-JC 2314 chr3R 31923478 31923488 chr3R 31923587 31923597 4 109 0.0 12.5 6.2 0.6 119 chr3R 31923478 intron heph - chr3R 31923538 intron heph - chr3R 31923597 intron heph - chr3R_4_31920001 chr3R_31920001 CanS-JC 2315 chr3R 31930880 31930928 chr3R 31931005 31931053 14 125 3.0 7.5 5.2 2.3 173 chr3R 31930880 intron heph - chr3R 31930966 intron heph - chr3R 31931053 intron heph - chr3R_14_31930001 chr3R_31930001 CanS-JC 2316 chr3R 31961313 31961368 chr3R 31961422 31961477 18 109 6.0 7.0 6.5 2.4 164 chr3R 31961313 intron heph - chr3R 31961395 intron heph - chr3R 31961477 intron heph - chr3R_18_31960001 chr3R_31960001 CanS-JC 2317 chr3R 31962067 31962096 chr3R 31962399 31962428 7 332 3.5 0.5 2.0 2.3 361 chr3R 31962067 intron heph - chr3R 31962248 intron heph - chr3R 31962428 intron heph - chr3R_7_31960001 chr3R_31960001 CanS-JC 2318 chr3R 31970198 31970258 chr3R 31970334 31970394 14 136 3.5 2.5 3.0 3.5 196 chr3R 31970198 intron heph - chr3R 31970296 intron heph - chr3R 31970394 intron heph - chr3R_14_31970001 chr3R_31970001 CanS-JC 2319 chr3R 31976536 31976572 chr3R 31976843 31976879 13 307 0.0 3.0 1.5 5.2 343 chr3R 31976536 intron heph - chr3R 31976708 intron heph - chr3R 31976879 intron heph - chr3R_13_31975001 chr3R_31975001 CanS-JC 2320 chr3R 31997967 31998011 chr3R 32005463 32005506 blood 11 7494 6.0 3.5 4.8 1.9 7539 chr3R 31997967 intron heph - chr3R 32001736 intron heph - chr3R 32005506 intron heph - chr3R_11_32000001 chr3R_32000001 CanS-JC 2321 chr3R 32043355 32043417 chr3R 32043508 32043570 14 153 29.0 28.5 28.8 0.5 215 chr3R 32043355 intergenic not near genes chr3R 32043462 intergenic not near genes chr3R 32043570 intergenic not near genes chr3R_14_32040001 chr3R_32040001 CanS-JC 2322 chr4 76477 76500 chr4 81946 81969 I-element 5 5469 8.5 4.5 6.5 0.7 5492 chr4 76477 intron pan + chr4 79223 intron pan + chr4 81969 intron pan + chr4_5_75001 chr4_75001 CanS-JC 2323 chr4 264952 265002 chr4 265181 265231 13 229 2.5 2.5 2.5 3.7 279 chr4 264952 exon RhoGAP102A + chr4 265092 3` UTR RhoGAP102A + chr4 265231 3` UTR RhoGAP102A + chr4_13_265001 chr4_265001 CanS-JC 2324 chr4 319966 319997 chr4 328168 328199 Stalker2 4 8202 4.5 5.5 5.0 0.7 8233 chr4 319966 3` UTR CG32850 + chr4 324082 intron CG32850 + chr4 328199 3` UTR,3` UTR CG32850 +,PMCA - chr4_4_320001 chr4_320001 CanS-JC 2325 chr4 336245 336279 chr4 336417 336472 4 188 4.5 5.0 4.8 0.7 227 chr4 336245 intron PMCA - chr4 336358 intron PMCA - chr4 336472 intron PMCA - chr4_4_335001 chr4_335001 CanS-JC 2326 chr4 409196 409249 chr4 409305 409358 12 109 6.5 0.0 3.2 2.9 162 chr4 409196 intergenic not near genes chr4 409277 intergenic not near genes chr4 409358 intergenic not near genes chr4_12_405001 chr4_405001 CanS-JC 2327 chr4 662163 662206 chr4 662834 662877 INE-1 12 671 2.0 2.5 2.2 3.8 714 chr4 662163 intron gw - chr4 662520 intron gw - chr4 662877 5` UTR gw - chr4_12_660001 chr4_660001 CanS-JC 2328 chr4 671581 671615 chr4 680190 680224 Tirant 14 8609 6.0 6.0 6.0 2.0 8643 chr4 671581 intron CG11360 + chr4 675902 intron CG11360 + chr4 680224 intron CG11360 + chr4_14_675001 chr4_675001 CanS-JC 2329 chr4 706627 706647 chr4 706834 706854 4 207 18.0 24.0 21.0 0.2 227 chr4 706627 intron ey + chr4 706740 intron ey + chr4 706854 intron ey + chr4_4_705001 chr4_705001 CanS-JC 2330 chr4 852881 852929 chr4 853271 853319 17 390 4.5 6.5 5.5 2.6 438 chr4 852881 intergenic not near genes chr4 853100 intergenic not near genes chr4 853319 intergenic CG11148 - chr4_17_850001 chr4_850001 CanS-JC 2331 chrX 295830 295874 chrX 303476 303520 412 8 7646 8.0 5.5 6.8 1.0 7690 chrX 295830 intron CG3777 + chrX 299675 intron CG3777 + chrX 303520 intron CG3777 + chrX_8_295001 chrX_295001 CanS-JC 2332 chrX 318457 318497 chrX 323569 323609 flea 5 5112 7.5 7.0 7.2 0.6 5152 chrX 318457 intron,intron CG3777 +,CG32816 - chrX 321033 intron,intron CG3777 +,CG32816 - chrX 323609 intron,intron CG3777 +,CG32816 - chrX_5_320001 chrX_320001 CanS-JC 2333 chrX 428396 428443 chrX 434607 434654 3S18 19 6211 3.0 5.5 4.2 3.7 6258 chrX 428396 intron CG32816 - chrX 431525 intron CG32816 - chrX 434654 intron CG32816 - chrX_19_430001 chrX_430001 CanS-JC 2334 chrX 551402 551444 chrX 558990 559032 412 17 7588 5.0 9.0 7.0 2.1 7630 chrX 551402 intron Appl + chrX 555217 intron Appl + chrX 559032 intron Appl + chrX_17_555001 chrX_555001 CanS-JC 2335 chrX 706764 706825 chrX 707162 707215 11 394 4.0 5.5 4.8 1.9 451 chrX 706764 intron sdk + chrX 706990 intron sdk + chrX 707215 intron sdk + chrX_11_705001 chrX_705001 CanS-JC 2336 chrX 732308 732361 chrX 732416 732468 12 108 3.0 5.5 4.2 2.3 160 chrX 732308 intron sdk + chrX 732388 intron sdk + chrX 732468 intron sdk + chrX_12_730001 chrX_730001 CanS-JC 2337 chrX 802266 802316 chrX 802369 802419 9 99 6.5 8.0 7.2 1.1 153 chrX 802266 exon CG13359 - chrX 802342 exon CG13359 - chrX 802419 exon CG13359 - chrX_9_800001 chrX_800001 CanS-JC 2338 chrX 812249 812283 chrX 817906 817940 297 5 5657 7.0 7.5 7.2 0.6 5691 chrX 812249 intron CG43867 - chrX 815094 intron CG43867 - chrX 817940 intron CG43867 - chrX_5_815001 chrX_815001 CanS-JC 2339 chrX 827578 827632 chrX 835396 835450 roo 19 7817 5.5 5.5 5.5 2.9 7872 chrX 827578 intron CG43867 - chrX 831514 intron CG43867 - chrX 835450 intron CG43867 - chrX_19_830001 chrX_830001 CanS-JC 2340 chrX 906683 906718 chrX 908498 908533 S-element 12 1814 1.5 5.5 3.5 2.7 1850 chrX 906683 intron CG43867 - chrX 907608 intron CG43867 - chrX 908533 intron CG43867 - chrX_12_905001 chrX_905001 CanS-JC 2341 chrX 918348 918404 chrX 918458 918514 24 110 5.5 5.5 5.5 3.7 166 chrX 918348 intron CG43867 - chrX 918431 intron CG43867 - chrX 918514 intron CG43867 - chrX_24_915001 chrX_915001 CanS-JC 2342 chrX 1051050 1051083 chrX 1051154 1051187 9 104 8.0 7.5 7.8 1.0 137 chrX 1051050 intron CR44779 + chrX 1051118 intron CR44779 + chrX 1051187 intron CR44779 + chrX_9_1050001 chrX_1050001 CanS-JC 2343 chrX 1063734 1063744 chrX 1072553 1072563 roo 4 8819 13.5 6.0 9.8 0.4 8829 chrX 1063734 intron CR44779 + chrX 1068148 intron CR44779 + chrX 1072563 intron CR44779 + chrX_4_1065001 chrX_1065001 CanS-JC 2344 chrX 1163274 1163326 chrX 1163378 1163430 14 104 5.0 4.0 4.5 2.5 156 chrX 1163274 intergenic CG34320 - chrX 1163352 intergenic CG34320 - chrX 1163430 intergenic CG34320 - chrX_14_1160001 chrX_1160001 CanS-JC 2345 chrX 1185547 1185589 chrX 1185652 1185694 18 105 4.5 4.0 4.2 3.5 147 chrX 1185547 intron CG14626 + chrX 1185620 intron CG14626 + chrX 1185694 intron CG14626 + chrX_18_1185001 chrX_1185001 CanS-JC 2346 chrX 1357759 1357806 chrX 1367955 1368001 Doc 13 10196 7.5 3.5 5.5 2.0 10242 chrX 1357759 intergenic png - chrX 1362880 intergenic not near genes chrX 1368001 intergenic not near genes chrX_13_1360001 chrX_1360001 CanS-JC 2347 chrX 1419957 1419976 chrX 1420072 1420091 4 115 7.0 9.5 8.2 0.4 134 chrX 1419957 intron futsch + chrX 1420024 intron futsch + chrX 1420091 intron futsch + chrX_4_1420001 chrX_1420001 CanS-JC 2348 chrX 1518016 1518075 chrX 1523444 1523503 jockey 18 5426 4.0 5.5 4.8 3.1 5487 chrX 1518016 intergenic inc + chrX 1520760 intergenic not near genes chrX 1523503 intergenic not near genes chrX_18_1520001 chrX_1520001 CanS-JC 2349 chrX 1627288 1627305 chrX 1627391 1627408 6 103 9.5 9.0 9.2 0.6 120 chrX 1627288 intron,intron Mur2B -,br + chrX 1627348 intron,intron Mur2B -,br + chrX 1627408 intron,intron Mur2B -,br + chrX_6_1625001 chrX_1625001 CanS-JC 2350 chrX 1712247 1712259 chrX 1712351 1712368 5 108 7.5 6.0 6.8 0.6 121 chrX 1712247 intergenic not near genes chrX 1712308 intergenic not near genes chrX 1712368 intergenic not near genes chrX_5_1710001 chrX_1710001 CanS-JC 2351 chrX 1930525 1930559 chrX 1938122 1938156 opus 7 7597 5.5 7.0 6.2 1.0 7631 chrX 1930525 intergenic CG11596 + chrX 1934340 intergenic not near genes chrX 1938156 3` UTR CG3857 - chrX_7_1930001 chrX_1930001 CanS-JC 2352 chrX 1954861 1954908 chrX 1962826 1962874 Stalker2 14 7966 7.5 8.5 8.0 1.6 8013 chrX 1954861 intron Hr4 + chrX 1958868 intron Hr4 + chrX 1962874 intron Hr4 + chrX_14_1955001 chrX_1955001 CanS-JC 2353 chrX 1974233 1974272 chrX 1974350 1974389 13 117 6.0 4.0 5.0 2.2 156 chrX 1974233 intron Hr4 + chrX 1974311 intron Hr4 + chrX 1974389 intron Hr4 + chrX_13_1970001 chrX_1970001 CanS-JC 2354 chrX 2146628 2146684 chrX 2146746 2146803 16 116 7.5 4.0 5.8 2.4 175 chrX 2146628 intron Pgd + chrX 2146716 intron Pgd + chrX 2146803 intron Pgd + chrX_16_2145001 chrX_2145001 CanS-JC 2355 chrX 2399820 2399858 chrX 2408199 2408237 roo 17 8379 6.5 4.5 5.5 2.6 8417 chrX 2399820 intergenic not near genes chrX 2404028 intergenic not near genes chrX 2408237 intergenic not near genes chrX_17_2400001 chrX_2400001 CanS-JC 2356 chrX 2461031 2461042 chrX 2461146 2461157 4 115 6.5 5.0 5.8 0.6 126 chrX 2461031 intron boi - chrX 2461094 intron boi - chrX 2461157 intron boi - chrX_4_2460001 chrX_2460001 CanS-JC 2357 chrX 2578788 2578819 chrX 2578906 2578937 8 118 5.0 4.5 4.8 1.4 149 chrX 2578788 intergenic Pdfr +,Vha36-3 - chrX 2578862 intergenic Pdfr +,Vha36-3 - chrX 2578937 intergenic Vha36-3 -,Pdfr + chrX_8_2575001 chrX_2575001 CanS-JC 2358 chrX 2581112 2581136 chrX 2581493 2581537 13 378 39.5 4.0 21.8 0.6 425 chrX 2581112 5` UTR CG13759 + chrX 2581324 intron CG13759 + chrX 2581537 intron CG13759 + chrX_13_2580001 chrX_2580001 CanS-JC 2359 chrX 2610363 2610409 chrX 2617506 2617552 HMS-Beagle 5 7143 6.5 4.5 5.5 0.8 7189 chrX 2610363 intergenic CG8636 - chrX 2613958 intergenic not near genes chrX 2617552 intergenic Tsp3A - chrX_5_2610001 chrX_2610001 CanS-JC 2360 chrX 2664365 2664413 chrX 2665537 2665585 1360 7 1172 6.5 8.5 7.5 0.8 1220 chrX 2664365 intron sgg + chrX 2664975 intron sgg + chrX 2665585 intron sgg + chrX_7_2660001 chrX_2660001 CanS-JC 2361 chrX 2793200 2793230 chrX 2795981 2796011 8 2781 15.5 21.5 18.5 0.4 2811 chrX 2793200 intron,intron kirre +,w - chrX 2794606 intron,intron kirre +,w - chrX 2796011 intron,intron kirre +,w - chrX_8_2790001 chrX_2790001 CanS-JC 2362 chrX 2808911 2808924 chrX 2809017 2809030 4 106 10.0 8.5 9.2 0.4 119 chrX 2808911 intron kirre + chrX 2808970 intron kirre + chrX 2809030 intron kirre + chrX_4_2805001 chrX_2805001 CanS-JC 2363 chrX 2823769 2823779 chrX 2832343 2832353 roo 6 8574 18.0 12.5 15.2 0.4 8584 chrX 2823769 intron kirre + chrX 2828061 intron kirre + chrX 2832353 intron kirre + chrX_6_2825001 chrX_2825001 CanS-JC 2364 chrX 2844876 2844904 chrX 2852312 2852340 mdg1 10 7436 10.5 4.0 7.2 1.2 7464 chrX 2844876 intron kirre + chrX 2848608 intron kirre + chrX 2852340 intron kirre + chrX_10_2845001 chrX_2845001 CanS-JC 2365 chrX 2844908 2844918 chrX 2852306 2852354 mdg1 4 7426 5.0 3.0 4.0 0.8 7446 chrX 2844908 intron kirre + chrX 2848631 intron kirre + chrX 2852354 intron kirre + chrX_4_2845001 chrX_2845001 CanS-JC 2366 chrX 2963804 2963814 chrX 2963906 2963916 7 102 8.0 7.5 7.8 0.8 112 chrX 2963804 intron,intron kirre +,rst - chrX 2963860 intron,intron kirre +,rst - chrX 2963916 intron,intron kirre +,rst - chrX_7_2960001 chrX_2960001 CanS-JC 2367 chrX 2972029 2972044 chrX 2972195 2972210 8 166 8.5 6.0 7.2 1.0 181 chrX 2972029 intron,intron kirre +,rst - chrX 2972120 intron,intron kirre +,rst - chrX 2972210 intron,intron kirre +,rst - chrX_8_2970001 chrX_2970001 CanS-JC 2368 chrX 3031138 3031189 chrX 3031245 3031295 14 108 5.5 6.5 6.0 2.0 157 chrX 3031138 intron kirre + chrX 3031216 intron kirre + chrX 3031295 intron kirre + chrX_14_3030001 chrX_3030001 CanS-JC 2369 chrX 3075606 3075647 chrX 3080942 3080980 Transpac 4 5334 3.0 0.0 1.5 1.6 5374 chrX 3075606 intron kirre + chrX 3078293 intron kirre + chrX 3080980 intron kirre + chrX_4_3075001 chrX_3075001 CanS-JC 2370 chrX 3082572 3082605 chrX 3082674 3082708 5 103 8.5 5.0 6.8 0.6 136 chrX 3082572 intron kirre + chrX 3082640 intron kirre + chrX 3082708 intron kirre + chrX_5_3080001 chrX_3080001 CanS-JC 2371 chrX 3109418 3109470 chrX 3109521 3109573 11 103 2.5 3.5 3.0 2.8 155 chrX 3109418 intron kirre + chrX 3109496 intron kirre + chrX 3109573 intron kirre + chrX_11_3105001 chrX_3105001 CanS-JC 2372 chrX 3218487 3218503 chrX 3227662 3227678 roo 5 9175 3.5 4.0 3.8 1.0 9191 chrX 3218487 intron dnc + chrX 3223082 intron dnc + chrX 3227678 intron dnc + chrX_5_3220001 chrX_3220001 CanS-JC 2373 chrX 3243627 3243652 chrX 3243743 3243768 11 116 6.0 6.5 6.2 1.5 141 chrX 3243627 intron dnc + chrX 3243698 intron dnc + chrX 3243768 intron dnc + chrX_11_3240001 chrX_3240001 CanS-JC 2374 chrX 3306322 3306362 chrX 3306430 3306470 7 108 3.0 0.0 1.5 2.8 148 chrX 3306322 intron dnc + chrX 3306396 intron dnc + chrX 3306470 intron dnc + chrX_7_3305001 chrX_3305001 CanS-JC 2375 chrX 3351782 3351812 chrX 3351894 3351924 11 112 4.0 6.5 5.2 1.8 142 chrX 3351782 intergenic not near genes chrX 3351853 intergenic not near genes chrX 3351924 intergenic not near genes chrX_11_3350001 chrX_3350001 CanS-JC 2376 chrX 3398117 3398376 chrX 3398224 3398480 15 105 1.0 6.5 3.8 3.1 363 chrX 3398117 intron,intron CR44999 +,CG12535 - chrX 3398298 intron,intron CR44999 +,CG12535 - chrX 3398480 intron,intron CR44999 +,CG12535 - chrX_15_3395001 chrX_3395001 CanS-JC 2377 chrX 3414997 3415049 chrX 3421208 3421260 3S18 12 6211 6.0 8.0 7.0 1.5 6263 chrX 3414997 intron,intron CR44999 +,CG12535 - chrX 3418128 intron,intron CR44999 +,CG12535 - chrX 3421260 intron,intron CR44999 +,CG12535 - chrX_12_3415001 chrX_3415001 CanS-JC 2378 chrX 3433403 3433434 chrX 3433514 3433545 9 111 8.0 10.5 9.2 0.9 142 chrX 3433403 intron,intron CR44999 +,CG12535 - chrX 3433474 intron,intron CR44999 +,CG12535 - chrX 3433545 intron,intron CR44999 +,CG12535 - chrX_9_3430001 chrX_3430001 CanS-JC 2379 chrX 3493067 3493119 chrX 3502252 3502304 roo 16 9185 4.5 4.0 4.2 3.1 9237 chrX 3493067 intron,intron CR44999 +,Gas8 - chrX 3497686 intron,intron CR44999 +,Gas8 - chrX 3502304 intron,intron CR44999 +,Gas8 - chrX_16_3495001 chrX_3495001 CanS-JC 2380 chrX 3709681 3709701 chrX 3709783 3709785 10 98 4.0 2.5 3.2 2.4 104 chrX 3709681 intron Rala - chrX 3709733 intron Rala - chrX 3709785 intron Rala - chrX_10_3705001 chrX_3705001 CanS-JC 2381 chrX 3726747 3726787 chrX 3730170 3730210 NOF 6 3423 7.0 4.5 5.8 0.9 3463 chrX 3726747 intron tlk + chrX 3728478 intron tlk + chrX 3730210 intron tlk + chrX_6_3725001 chrX_3725001 CanS-JC 2382 chrX 3842330 3842352 chrX 3842569 3842591 pogo 9 239 2.5 5.0 3.8 1.9 261 chrX 3842330 intron ec + chrX 3842460 intron ec + chrX 3842591 intron ec + chrX_9_3840001 chrX_3840001 CanS-JC 2383 chrX 3881244 3881302 chrX 3881409 3881467 14 165 5.0 2.5 3.8 2.9 223 chrX 3881244 intron VhaAC39-1 + chrX 3881356 intron VhaAC39-1 + chrX 3881467 exon VhaAC39-1 + chrX_14_3880001 chrX_3880001 CanS-JC 2384 chrX 3888476 3888491 chrX 3888580 3888595 5 104 0.0 5.0 2.5 1.4 119 chrX 3888476 intron CG15239 + chrX 3888536 intron CG15239 + chrX 3888595 intron CG15239 + chrX_5_3885001 chrX_3885001 CanS-JC 2385 chrX 3950775 3950828 chrX 3950881 3950934 11 106 3.5 4.0 3.8 2.3 159 chrX 3950775 intron Vap-33A + chrX 3950854 intron Vap-33A + chrX 3950934 intron Vap-33A + chrX_11_3950001 chrX_3950001 CanS-JC 2386 chrX 3986839 3986888 chrX 3994498 3994547 412 11 7659 6.0 6.0 6.0 1.6 7708 chrX 3986839 intergenic not near genes chrX 3990693 intergenic not near genes chrX 3994547 intergenic not near genes chrX_11_3990001 chrX_3990001 CanS-JC 2387 chrX 4039054 4039068 chrX 4039159 4039171 4 104 14.0 7.0 10.5 0.3 117 chrX 4039054 intergenic not near genes chrX 4039112 intergenic not near genes chrX 4039171 intergenic not near genes chrX_4_4035001 chrX_4035001 CanS-JC 2388 chrX 4047456 4047500 chrX 4047595 4047639 9 139 3.5 4.5 4.0 1.8 183 chrX 4047456 intergenic CR45482 - chrX 4047548 intergenic CR45482 - chrX 4047639 3` UTR CR45482 - chrX_9_4045001 chrX_4045001 CanS-JC 2389 chrX 4055631 4055660 chrX 4055740 4055769 12 108 12.5 6.0 9.2 1.2 138 chrX 4055631 intergenic not near genes chrX 4055700 intergenic not near genes chrX 4055769 intergenic not near genes chrX_12_4055001 chrX_4055001 CanS-JC 2390 chrX 4101843 4101895 chrX 4101948 4102001 10 106 3.0 4.0 3.5 2.2 158 chrX 4101843 exon CG15375 + chrX 4101922 exon CG15375 + chrX 4102001 exon CG15375 + chrX_10_4100001 chrX_4100001 CanS-JC 2391 chrX 4132399 4132417 chrX 4132502 4132520 6 103 3.5 6.5 5.0 1.0 121 chrX 4132399 3` UTR GlcAT-I + chrX 4132460 3` UTR GlcAT-I + chrX 4132520 3` UTR GlcAT-I + chrX_6_4130001 chrX_4130001 CanS-JC 2392 chrX 4157870 4157922 chrX 4164949 4165001 297 8 7079 6.0 8.0 7.0 1.0 7131 chrX 4157870 intron Fas2 - chrX 4161436 intron Fas2 - chrX 4165001 intron Fas2 - chrX_8_4160001 chrX_4160001 CanS-JC 2393 chrX 4209904 4209957 chrX 4210020 4210073 8 116 0.0 3.0 1.5 3.2 169 chrX 4209904 intergenic not near genes chrX 4209988 intergenic not near genes chrX 4210073 intergenic not near genes chrX_8_4205001 chrX_4205001 CanS-JC 2394 chrX 4396948 4397009 chrX 4397059 4397108 10 106 2.5 5.0 3.8 2.1 160 chrX 4396948 intron CR32773 - chrX 4397028 intron CR32773 - chrX 4397108 intron CR32773 - chrX_10_4395001 chrX_4395001 CanS-JC 2395 chrX 4436440 4436496 chrX 4436542 4436593 6 106 5.5 3.0 4.2 1.2 153 chrX 4436440 intron,intron CR32773 -,bi + chrX 4436516 intron,intron CR32773 -,bi + chrX 4436593 intron,intron CR32773 -,bi + chrX_6_4435001 chrX_4435001 CanS-JC 2396 chrX 4525305 4525362 chrX 4525427 4525482 17 121 7.0 2.0 4.5 3.1 177 chrX 4525305 intron CR32773 - chrX 4525394 intron CR32773 - chrX 4525482 intron CR32773 - chrX_17_4525001 chrX_4525001 CanS-JC 2397 chrX 4692318 4692375 chrX 4692437 4692494 19 118 7.5 3.0 5.2 3.1 176 chrX 4692318 intron ctp + chrX 4692406 intron ctp + chrX 4692494 intron ctp + chrX_19_4690001 chrX_4690001 CanS-JC 2398 chrX 4698034 4698080 chrX 4698152 4698199 12 119 4.0 5.0 4.5 2.2 165 chrX 4698034 intron ctp + chrX 4698116 intron ctp + chrX 4698199 intron ctp + chrX_12_4695001 chrX_4695001 CanS-JC 2399 chrX 4700369 4700415 chrX 4700738 4700784 jockey 28 369 3.0 4.5 3.8 5.8 415 chrX 4700369 3` UTR ctp + chrX 4700576 3` UTR ctp + chrX 4700784 3` UTR ctp + chrX_28_4700001 chrX_4700001 CanS-JC 2400 chrX 4717339 4717385 chrX 4717874 4717924 12 539 1.0 7.0 4.0 2.4 585 chrX 4717339 intron Proc-R + chrX 4717632 intron Proc-R + chrX 4717924 intron Proc-R + chrX_12_4715001 chrX_4715001 CanS-JC 2401 chrX 4731791 4731806 chrX 4736910 4736925 jockey 5 5119 8.5 3.0 5.8 0.7 5134 chrX 4731791 intergenic not near genes chrX 4734358 intergenic not near genes chrX 4736925 intergenic not near genes chrX_5_4730001 chrX_4730001 CanS-JC 2402 chrX 4744138 4744167 chrX 4744262 4744291 6 124 0.0 1.0 0.5 4.0 153 chrX 4744138 intergenic not near genes chrX 4744214 intergenic not near genes chrX 4744291 intergenic not near genes chrX_6_4740001 chrX_4740001 CanS-JC 2403 chrX 4763229 4763273 chrX 4763743 4763787 Stalker4 10 514 8.0 2.0 5.0 1.7 558 chrX 4763229 intergenic not near genes chrX 4763508 intergenic not near genes chrX 4763787 intergenic not near genes chrX_10_4760001 chrX_4760001 CanS-JC 2404 chrX 4792353 4792395 chrX 4792812 4792854 jockey 8 459 7.0 5.5 6.2 1.1 501 chrX 4792353 intergenic not near genes chrX 4792604 intergenic not near genes chrX 4792854 intergenic not near genes chrX_8_4790001 chrX_4790001 CanS-JC 2405 chrX 4808995 4809052 chrX 4809126 4809183 18 131 4.0 7.5 5.8 2.6 188 chrX 4808995 intergenic not near genes chrX 4809089 intergenic not near genes chrX 4809183 intergenic not near genes chrX_18_4805001 chrX_4805001 CanS-JC 2406 chrX 4827949 4827998 chrX 4835346 4835395 Stalker4 19 7397 3.5 6.0 4.8 3.3 7446 chrX 4827949 intergenic not near genes chrX 4831672 intergenic not near genes chrX 4835395 intergenic not near genes chrX_19_4830001 chrX_4830001 CanS-JC 2407 chrX 4878857 4878891 chrX 4878992 4879026 6 134 3.0 0.0 1.5 2.4 169 chrX 4878857 intron CG42594 + chrX 4878942 intron CG42594 + chrX 4879026 intron CG42594 + chrX_6_4875001 chrX_4875001 CanS-JC 2408 chrX 4885746 4885773 chrX 4885865 4885892 13 119 7.5 4.0 5.8 1.9 146 chrX 4885746 intron CG42594 + chrX 4885819 intron CG42594 + chrX 4885892 intron CG42594 + chrX_13_4885001 chrX_4885001 CanS-JC 2409 chrX 4887023 4887076 chrX 4887154 4887207 19 131 4.0 4.0 4.0 3.8 184 chrX 4887023 intron CG42594 + chrX 4887115 intron CG42594 + chrX 4887207 intron CG42594 + chrX_19_4885001 chrX_4885001 CanS-JC 2410 chrX 4902630 4902676 chrX 4902737 4902783 13 107 3.0 4.5 3.8 2.7 153 chrX 4902630 intron CG42594 + chrX 4902706 intron CG42594 + chrX 4902783 intron CG42594 + chrX_13_4900001 chrX_4900001 CanS-JC 2411 chrX 4965533 4965587 chrX 4965639 4965693 14 106 6.5 11.5 9.0 1.4 160 chrX 4965533 intron CR44833 - chrX 4965613 intron CR44833 - chrX 4965693 intron CR44833 - chrX_14_4965001 chrX_4965001 CanS-JC 2412 chrX 4990018 4990073 chrX 4997258 4997313 roo 12 7240 2.5 3.0 2.8 3.2 7295 chrX 4990018 intron CR44833 - chrX 4993666 intron CR44833 - chrX 4997313 intron CR44833 - chrX_12_4990001 chrX_4990001 CanS-JC 2413 chrX 5096253 5096302 chrX 5103844 5103893 springer 8 7591 7.0 5.0 6.0 1.1 7640 chrX 5096253 intron,intron CG15465 +,rg + chrX 5100073 intron,intron CG15465 +,rg + chrX 5103893 intron,intron CG15465 +,rg + chrX_8_5100001 chrX_5100001 CanS-JC 2414 chrX 5112199 5112238 chrX 5112344 5112381 5 145 5.5 0.5 3.0 1.2 182 chrX 5112199 intron,intron CG15465 +,rg + chrX 5112290 intron,intron CG15465 +,rg + chrX 5112381 intron,intron CG15465 +,rg + chrX_5_5110001 chrX_5110001 CanS-JC 2415 chrX 5131374 5131428 chrX 5131481 5131535 17 107 5.5 6.5 6.0 2.4 161 chrX 5131374 intron,intron CG15465 +,rg + chrX 5131454 intron,intron CG15465 +,rg + chrX 5131535 intron,intron CG15465 +,rg + chrX_17_5130001 chrX_5130001 CanS-JC 2416 chrX 5203957 5204002 chrX 5204495 5204538 14 538 3.0 3.5 3.2 3.3 581 chrX 5203957 intron,intron CG15465 +,rg + chrX 5204248 intron,intron CG15465 +,rg + chrX 5204538 intron,intron CG15465 +,rg + chrX_14_5200001 chrX_5200001 CanS-JC 2417 chrX 5220364 5220390 chrX 5220631 5220657 5 267 6.5 2.0 4.2 1.0 293 chrX 5220364 intron,intron CG15465 +,rg + chrX 5220510 intron,intron CG15465 +,rg + chrX 5220657 intron,intron CG15465 +,rg + chrX_5_5220001 chrX_5220001 CanS-JC 2418 chrX 5291484 5291507 chrX 5291593 5291616 13 107 7.0 6.5 6.8 1.7 132 chrX 5291484 intergenic not near genes chrX 5291550 intergenic not near genes chrX 5291616 intergenic not near genes chrX_13_5290001 chrX_5290001 CanS-JC 2419 chrX 5338688 5338721 chrX 5339967 5339992 jockey 9 1278 7.0 5.5 6.2 1.2 1304 chrX 5338688 intergenic not near genes chrX 5339340 intergenic not near genes chrX 5339992 intergenic SK + chrX_9_5335001 chrX_5335001 CanS-JC 2420 chrX 5359258 5359293 chrX 12649914 12649915 4 7290646 4.5 23.0 13.8 0.3 7290657 chrX 5359258 intron SK + chrX 9004586 intron,intron rdgA +,CR43836 - chrX 12649915 intron Tomosyn + chrX_4_9000001 chrX_9000001 CanS-JC 2421 chrX 5428740 5428790 chrX 5429002 5429052 13 262 1.5 5.0 3.2 3.1 312 chrX 5428740 5` UTR CR45517 + chrX 5428896 5` UTR CR45517 + chrX 5429052 5` UTR CR45517 + chrX_13_5425001 chrX_5425001 CanS-JC 2422 chrX 5736280 5736289 chrX 5736556 5736565 6 276 1.5 12.0 6.8 0.8 285 chrX 5736280 intron CG32758 - chrX 5736422 intron CG32758 - chrX 5736565 intron CG32758 - chrX_6_5735001 chrX_5735001 CanS-JC 2423 chrX 5792561 5792739 chrX 5792711 5792844 9 124 3.0 0.0 1.5 3.6 283 chrX 5792561 exon CG12239 + chrX 5792702 exon CG12239 + chrX 5792844 exon CG12239 + chrX_9_5790001 chrX_5790001 CanS-JC 2424 chrX 5798851 5798884 chrX 5799039 5799072 13 188 1.0 8.0 4.5 2.4 221 chrX 5798851 intergenic not near genes chrX 5798962 intergenic not near genes chrX 5799072 intergenic not near genes chrX_13_5795001 chrX_5795001 CanS-JC 2425 chrX 5883788 5883826 chrX 5884055 5884093 pogo 8 267 4.0 4.5 4.2 1.5 305 chrX 5883788 intron CR45668 - chrX 5883940 intron CR45668 - chrX 5884093 intron CR45668 - chrX_8_5880001 chrX_5880001 CanS-JC 2426 chrX 5884145 5884189 chrX 5884412 5884456 pogo 8 267 8.5 4.0 6.2 1.1 311 chrX 5884145 intron CR45668 - chrX 5884300 intron CR45668 - chrX 5884456 intron CR45668 - chrX_8_5880001 chrX_5880001 CanS-JC 2427 chrX 5953752 5953771 chrX 5953903 5953921 8 151 3.0 10.0 6.5 1.1 169 chrX 5953752 exon CG6048 + chrX 5953836 exon CG6048 + chrX 5953921 exon CG6048 + chrX_8_5950001 chrX_5950001 CanS-JC 2428 chrX 6080806 6080828 chrX 6080916 6080938 6 110 9.5 2.0 5.8 0.9 132 chrX 6080806 intron CG4660 - chrX 6080872 intron CG4660 - chrX 6080938 intron CG4660 - chrX_6_6080001 chrX_6080001 CanS-JC 2429 chrX 6294474 6294534 chrX 6294598 6294658 12 124 3.0 8.5 5.8 1.8 184 chrX 6294474 intergenic CG15891 -,CG15892 -,CG15896 + chrX 6294566 3` UTR CG15891 - chrX 6294658 exon CG15891 - chrX_12_6290001 chrX_6290001 CanS-JC 2430 chrX 6335222 6335243 chrX 6337758 6337779 Tirant 8 2536 0.0 14.0 7.0 1.0 2557 chrX 6335222 intergenic not near genes chrX 6336500 intergenic not near genes chrX 6337779 5` UTR CG3842 + chrX_8_6335001 chrX_6335001 CanS-JC 2431 chrX 6388644 6388695 chrX 6388746 6388797 15 102 5.0 5.0 5.0 2.5 153 chrX 6388644 intergenic not near genes chrX 6388720 intergenic not near genes chrX 6388797 intergenic not near genes chrX_15_6385001 chrX_6385001 CanS-JC 2432 chrX 6392859 6392901 chrX 6397650 6397654 Doc 9 4787 6.0 10.0 8.0 1.0 4795 chrX 6392859 intergenic not near genes chrX 6395256 intergenic not near genes chrX 6397654 intergenic not near genes chrX_9_6395001 chrX_6395001 CanS-JC 2433 chrX 6503190 6503224 chrX 6503304 6503338 8 113 0.5 10.5 5.5 1.2 148 chrX 6503190 intron CG42340 - chrX 6503264 intron CG42340 - chrX 6503338 intron CG42340 - chrX_8_6500001 chrX_6500001 CanS-JC 2434 chrX 6509904 6509944 chrX 6510009 6510049 11 105 3.5 6.0 4.8 1.9 145 chrX 6509904 intron CG42340 - chrX 6509976 intron CG42340 - chrX 6510049 intron CG42340 - chrX_11_6505001 chrX_6505001 CanS-JC 2435 chrX 6562797 6562848 chrX 6571305 6571356 Tirant 14 8508 4.5 3.5 4.0 2.8 8559 chrX 6562797 intron CG34417 + chrX 6567076 intron CG34417 + chrX 6571356 intron CG34417 + chrX_14_6565001 chrX_6565001 CanS-JC 2436 chrX 6591828 6591853 chrX 6591939 6591964 7 111 3.5 0.0 1.8 2.5 136 chrX 6591828 intron Pat1 + chrX 6591896 intron Pat1 + chrX 6591964 intron Pat1 + chrX_7_6590001 chrX_6590001 CanS-JC 2437 chrX 6652999 6653032 chrX 6653101 6653134 4 102 6.0 3.5 4.8 0.7 135 chrX 6652999 3` UTR pigs + chrX 6653066 intergenic CG3226 -,pigs + chrX 6653134 3` UTR CG3226 - chrX_4_6650001 chrX_6650001 CanS-JC 2438 chrX 6733420 6733667 chrX 6733530 6733774 4 112 10.5 32.0 21.2 0.2 354 chrX 6733420 intron,intron CG3168 -,CR43461 + chrX 6733597 intron,intron CG3168 -,CR43461 + chrX 6733774 intron,intron CG3168 -,CR43461 + chrX_4_6730001 chrX_6730001 CanS-JC 2439 chrX 6737503 6737549 chrX 6737611 6737657 24 107 2.5 3.5 3.0 6.0 154 chrX 6737503 intron CG3168 - chrX 6737580 intron CG3168 - chrX 6737657 intron CG3168 - chrX_24_6735001 chrX_6735001 CanS-JC 2440 chrX 6814261 6814278 chrX 6814365 6814382 5 104 8.0 2.0 5.0 0.8 121 chrX 6814261 intron iav + chrX 6814322 intron iav + chrX 6814382 intron iav + chrX_5_6810001 chrX_6810001 CanS-JC 2441 chrX 6859542 6859553 chrX 6859981 6859992 4 439 2.0 0.5 1.2 1.8 450 chrX 6859542 intron CG14434 - chrX 6859767 intron CG14434 - chrX 6859992 intron CG14434 - chrX_4_6855001 chrX_6855001 CanS-JC 2442 chrX 6896195 6896226 chrX 6896302 6896333 13 107 2.5 5.0 3.8 2.7 138 chrX 6896195 intergenic not near genes chrX 6896264 intergenic not near genes chrX 6896333 intergenic not near genes chrX_13_6895001 chrX_6895001 CanS-JC 2443 chrX 6897565 6897710 chrX 6897669 6897846 22 129 0.0 0.0 0.0 22.0 281 chrX 6897565 intergenic not near genes chrX 6897706 intergenic not near genes chrX 6897846 intergenic not near genes chrX_22_6895001 chrX_6895001 CanS-JC 2444 chrX 6901352 6901386 chrX 6901454 6901488 23 102 1.5 4.5 3.0 5.8 136 chrX 6901352 intergenic not near genes chrX 6901420 intergenic not near genes chrX 6901488 intergenic not near genes chrX_23_6900001 chrX_6900001 CanS-JC 2445 chrX 6984601 6984651 chrX 6984704 6984754 12 103 1.5 4.0 2.8 3.2 153 chrX 6984601 intron ogre - chrX 6984678 intron ogre - chrX 6984754 intron ogre - chrX_12_6980001 chrX_6980001 CanS-JC 2446 chrX 6989476 6989533 chrX 6989589 6989646 13 113 3.0 6.0 4.5 2.4 170 chrX 6989476 intron ogre - chrX 6989561 intron ogre - chrX 6989646 intron ogre - chrX_13_6985001 chrX_6985001 CanS-JC 2447 chrX 7023583 7023628 chrX 7030999 7031043 Tabor 16 7416 6.0 5.5 5.8 2.4 7460 chrX 7023583 intron CG12541 - chrX 7027313 intron CG12541 - chrX 7031043 intron CG12541 - chrX_16_7025001 chrX_7025001 CanS-JC 2448 chrX 7125227 7125271 chrX 7134412 7134456 roo 7 9185 1.0 4.5 2.8 1.8 9229 chrX 7125227 intergenic not near genes chrX 7129842 intergenic not near genes chrX 7134456 intergenic not near genes chrX_7_7125001 chrX_7125001 CanS-JC 2449 chrX 7470202 7470222 chrX 7470316 7470336 5 114 1.5 10.5 6.0 0.7 134 chrX 7470202 intergenic not near genes chrX 7470269 intergenic not near genes chrX 7470336 intergenic not near genes chrX_5_7470001 chrX_7470001 CanS-JC 2450 chrX 7570618 7570664 chrX 7570778 7570824 14 160 2.5 4.5 3.5 3.1 206 chrX 7570618 intergenic not near genes chrX 7570721 intergenic not near genes chrX 7570824 intergenic not near genes chrX_14_7570001 chrX_7570001 CanS-JC 2451 chrX 7845700 7845757 chrX 7847217 7847274 hopper2 8 1517 2.0 5.5 3.8 1.7 1574 chrX 7845700 intergenic not near genes chrX 7846487 intergenic not near genes chrX 7847274 intergenic not near genes chrX_8_7845001 chrX_7845001 CanS-JC 2452 chrX 7881827 7881880 chrX 7881937 7881988 13 108 2.5 2.0 2.2 4.1 161 chrX 7881827 intergenic Ir7f -,Ir7e - chrX 7881908 intergenic Ir7f -,Ir7e - chrX 7881988 3` UTR Ir7f - chrX_13_7880001 chrX_7880001 CanS-JC 2453 chrX 8013226 8013269 chrX 8013364 8013407 8 138 3.0 4.5 3.8 1.7 181 chrX 8013226 intron Tbh + chrX 8013316 intron Tbh + chrX 8013407 intron Tbh + chrX_8_8010001 chrX_8010001 CanS-JC 2454 chrX 8031412 8031456 chrX 8035747 8035791 Juan 9 4335 5.0 12.0 8.5 0.9 4379 chrX 8031412 intergenic not near genes chrX 8033602 intergenic not near genes chrX 8035791 3` UTR CG2233 - chrX_9_8030001 chrX_8030001 CanS-JC 2455 chrX 8063722 8063763 chrX 8063847 8063886 14 124 2.0 7.0 4.5 2.5 164 chrX 8063722 intron mys + chrX 8063804 intron mys + chrX 8063886 5` UTR mys + chrX_14_8060001 chrX_8060001 CanS-JC 2456 chrX 8066588 8066601 chrX 8066692 8066716 5 113 0.0 6.0 3.0 1.2 128 chrX 8066588 intron mys + chrX 8066652 intron mys + chrX 8066716 intron mys + chrX_5_8065001 chrX_8065001 CanS-JC 2457 chrX 8069551 8069585 chrX 8069663 8069698 8 112 4.5 1.5 3.0 2.0 147 chrX 8069551 3` UTR mys + chrX 8069624 3` UTR mys + chrX 8069698 3` UTR mys + chrX_8_8065001 chrX_8065001 CanS-JC 2458 chrX 8092268 8092320 chrX 8092379 8092431 10 111 0.5 6.5 3.5 2.2 163 chrX 8092268 intron Ubc-E2H - chrX 8092350 intron Ubc-E2H - chrX 8092431 intron Ubc-E2H - chrX_10_8090001 chrX_8090001 CanS-JC 2459 chrX 8364842 8364875 chrX 8365265 8365294 BS 11 423 4.0 6.0 5.0 1.8 452 chrX 8364842 intron nAChRalpha3 - chrX 8365068 intron nAChRalpha3 - chrX 8365294 intron nAChRalpha3 - chrX_11_8365001 chrX_8365001 CanS-JC 2460 chrX 8506004 8506058 chrX 8506108 8506162 7 102 6.5 9.0 7.8 0.8 158 chrX 8506004 intron CG33181 + chrX 8506083 intron CG33181 + chrX 8506162 intron CG33181 + chrX_7_8505001 chrX_8505001 CanS-JC 2461 chrX 8506511 8506561 chrX 8506745 8506795 14 234 2.5 2.5 2.5 4.0 284 chrX 8506511 intron CG33181 + chrX 8506653 intron CG33181 + chrX 8506795 intron CG33181 + chrX_14_8505001 chrX_8505001 CanS-JC 2462 chrX 8605291 8605343 chrX 8605394 8605446 18 103 6.0 3.5 4.8 3.1 155 chrX 8605291 exon Caf1-180 - chrX 8605368 exon Caf1-180 - chrX 8605446 exon Caf1-180 - chrX_18_8605001 chrX_8605001 CanS-JC 2463 chrX 8658672 8658687 chrX 8658793 8658808 4 121 5.5 0.0 2.8 1.1 136 chrX 8658672 intergenic not near genes chrX 8658740 intergenic not near genes chrX 8658808 intergenic not near genes chrX_4_8655001 chrX_8655001 CanS-JC 2464 chrX 8668745 8668793 chrX 8668878 8668926 11 133 3.0 3.5 3.2 2.6 181 chrX 8668745 intergenic not near genes chrX 8668836 intergenic not near genes chrX 8668926 intergenic not near genes chrX_11_8665001 chrX_8665001 CanS-JC 2465 chrX 8772222 8772249 chrX 8772327 8772354 10 105 1.0 9.0 5.0 1.7 132 chrX 8772222 intron Lim1 - chrX 8772288 intron Lim1 - chrX 8772354 intron Lim1 - chrX_10_8770001 chrX_8770001 CanS-JC 2466 chrX 8843798 8843836 chrX 8843908 8843925 14 108 5.0 0.0 2.5 4.0 127 chrX 8843798 intron CG12075 + chrX 8843862 intron CG12075 + chrX 8843925 intron CG12075 + chrX_14_8840001 chrX_8840001 CanS-JC 2467 chrX 8860775 8860800 chrX 8860885 8860910 6 110 0.0 10.0 5.0 1.0 135 chrX 8860775 intron CG12075 + chrX 8860842 intron CG12075 + chrX 8860910 intron CG12075 + chrX_6_8860001 chrX_8860001 CanS-JC 2468 chrX 8908794 8908805 chrX 8908918 8908929 7 124 6.0 4.0 5.0 1.2 135 chrX 8908794 intron rdgA + chrX 8908862 intron rdgA + chrX 8908929 intron rdgA + chrX_7_8905001 chrX_8905001 CanS-JC 2469 chrX 8922308 8922357 chrX 8922768 8922817 jockey 20 459 5.0 4.0 4.5 3.6 509 chrX 8922308 intron rdgA + chrX 8922562 intron rdgA + chrX 8922817 intron rdgA + chrX_20_8920001 chrX_8920001 CanS-JC 2470 chrX 8948735 8948788 chrX 8956271 8956324 roo 17 7536 4.5 5.5 5.0 2.8 7589 chrX 8948735 intron rdgA + chrX 8952530 intron rdgA + chrX 8956324 intron rdgA + chrX_17_8950001 chrX_8950001 CanS-JC 2471 chrX 8968838 8968855 chrX 8968943 8968960 8 105 12.0 14.0 13.0 0.6 122 chrX 8968838 intron rdgA + chrX 8968899 intron rdgA + chrX 8968960 intron rdgA + chrX_8_8965001 chrX_8965001 CanS-JC 2472 chrX 9062713 9062738 chrX 9062817 9062842 5 104 1.0 0.0 0.5 3.3 129 chrX 9062713 intron CG15365 - chrX 9062778 intron CG15365 - chrX 9062842 intron CG15365 - chrX_5_9060001 chrX_9060001 CanS-JC 2473 chrX 9129457 9129501 chrX 9129569 9129612 16 112 5.0 7.5 6.2 2.2 155 chrX 9129457 intron fend - chrX 9129534 intron fend - chrX 9129612 intron fend - chrX_16_9125001 chrX_9125001 CanS-JC 2474 chrX 9218060 9218078 chrX 9218177 9218195 4 117 10.0 4.0 7.0 0.5 135 chrX 9218060 3` UTR t - chrX 9218128 3` UTR t - chrX 9218195 3` UTR t - chrX_4_9215001 chrX_9215001 CanS-JC 2475 chrX 9229882 9229940 chrX 9229988 9230045 21 104 2.5 4.0 3.2 5.0 163 chrX 9229882 intron CG12121 - chrX 9229964 intron CG12121 - chrX 9230045 intron CG12121 - chrX_21_9225001 chrX_9225001 CanS-JC 2476 chrX 9335465 9335479 chrX 9335787 9335801 6 322 9.0 3.0 6.0 0.9 336 chrX 9335465 intron CG34449 - chrX 9335633 intron CG34449 - chrX 9335801 intron CG34449 - chrX_6_9335001 chrX_9335001 CanS-JC 2477 chrX 9337919 9337953 chrX 9338037 9338071 11 118 4.0 4.5 4.2 2.1 152 chrX 9337919 intron CG34449 - chrX 9337995 intron CG34449 - chrX 9338071 exon CG34449 - chrX_11_9335001 chrX_9335001 CanS-JC 2478 chrX 9337955 9337972 chrX 9338035 9338090 8 113 3.0 3.5 3.2 1.9 135 chrX 9337955 intron CG34449 - chrX 9338022 intron CG34449 - chrX 9338090 exon CG34449 - chrX_8_9335001 chrX_9335001 CanS-JC 2479 chrX 9457823 9457848 chrX 9457926 9457951 5 103 7.0 8.0 7.5 0.6 128 chrX 9457823 intron mgl - chrX 9457887 intron mgl - chrX 9457951 intron mgl - chrX_5_9455001 chrX_9455001 CanS-JC 2480 chrX 9465115 9465156 chrX 9465235 9465276 9 120 3.5 1.5 2.5 2.6 161 chrX 9465115 intron mgl - chrX 9465196 intron mgl - chrX 9465276 intron mgl - chrX_9_9465001 chrX_9465001 CanS-JC 2481 chrX 9508114 9508161 chrX 9509658 9509705 jockey 18 1544 6.5 6.0 6.2 2.5 1591 chrX 9508114 intron CG32700 - chrX 9508910 intron CG32700 - chrX 9509705 intron CG32700 - chrX_18_9505001 chrX_9505001 CanS-JC 2482 chrX 9575779 9575821 chrX 9576128 9576171 mdg3 11 350 7.0 11.5 9.2 1.1 392 chrX 9575779 intron,exon CG32699 -,CG42395 - chrX 9575975 intron,intron CG32699 -,CG42395 - chrX 9576171 intron,5` UTR CG32699 -,CG42395 - chrX_11_9575001 chrX_9575001 CanS-JC 2483 chrX 9599149 9599202 chrX 9599253 9599306 16 104 4.0 2.5 3.2 3.8 157 chrX 9599149 intergenic not near genes chrX 9599228 intergenic not near genes chrX 9599306 intergenic not near genes chrX_16_9595001 chrX_9595001 CanS-JC 2484 chrX 9838455 9838462 chrX 9839450 9839457 6 995 8.0 12.0 10.0 0.5 1002 chrX 9838455 intron CG32698 + chrX 9838956 intron CG32698 + chrX 9839457 intron CG32698 + chrX_6_9835001 chrX_9835001 CanS-JC 2485 chrX 9837825 9837866 chrX 9839731 9839769 12 1904 33.0 32.5 32.8 0.4 1944 chrX 9837825 intron CG32698 + chrX 9838797 intron CG32698 + chrX 9839769 intron CG32698 + chrX_12_9835001 chrX_9835001 CanS-JC 2486 chrX 9923365 9923412 chrX 9923482 9923529 13 117 5.5 4.0 4.8 2.2 164 chrX 9923365 intergenic not near genes chrX 9923447 intergenic not near genes chrX 9923529 intergenic not near genes chrX_13_9920001 chrX_9920001 CanS-JC 2487 chrX 9931611 9931624 chrX 9931873 9931886 4 262 3.0 1.0 2.0 1.3 275 chrX 9931611 intergenic not near genes chrX 9931748 intergenic not near genes chrX 9931886 intergenic not near genes chrX_4_9930001 chrX_9930001 CanS-JC 2488 chrX 10138191 10138248 chrX 10145721 10145778 412 19 7530 4.5 3.5 4.0 3.8 7587 chrX 10138191 intron,intron RhoU +,CR44894 - chrX 10141984 intron,intron RhoU +,CR44894 - chrX 10145778 intron,intron RhoU +,CR44894 - chrX_19_10140001 chrX_10140001 CanS-JC 2489 chrX 10151900 10151938 chrX 10152003 10152041 5 103 5.5 5.0 5.2 0.8 141 chrX 10151900 intron CR44894 - chrX 10151970 intron CR44894 - chrX 10152041 intron CR44894 - chrX_5_10150001 chrX_10150001 CanS-JC 2490 chrX 10154265 10154300 chrX 10154367 10154402 9 102 11.5 9.5 10.5 0.8 137 chrX 10154265 intron,intron CR44894 -,CG12645 + chrX 10154334 intron,intron CR44894 -,CG12645 + chrX 10154402 intron,exon CR44894 -,CG12645 + chrX_9_10150001 chrX_10150001 CanS-JC 2491 chrX 10216820 10216852 chrX 10216927 10216959 9 107 8.0 10.0 9.0 0.9 139 chrX 10216820 3` UTR l(1)G0230 + chrX 10216890 3` UTR l(1)G0230 + chrX 10216959 3` UTR l(1)G0230 + chrX_9_10215001 chrX_10215001 CanS-JC 2492 chrX 10230590 10230640 chrX 10232330 10232384 19 1745 3.0 2.5 2.8 5.0 1794 chrX 10230590 intergenic Ipod - chrX 10231487 exon Ipod - chrX 10232384 5` UTR Ipod - chrX_19_10230001 chrX_10230001 CanS-JC 2493 chrX 10285862 10285884 chrX 10286224 10286246 7 361 4.5 1.0 2.8 1.8 384 chrX 10285862 intron alpha-Man-I - chrX 10286054 intron alpha-Man-I - chrX 10286246 intron alpha-Man-I - chrX_7_10285001 chrX_10285001 CanS-JC 2494 chrX 10317533 10317578 chrX 10317637 10317682 12 104 0.0 4.5 2.2 3.8 149 chrX 10317533 intron alpha-Man-I - chrX 10317608 intron alpha-Man-I - chrX 10317682 intron alpha-Man-I - chrX_12_10315001 chrX_10315001 CanS-JC 2495 chrX 10343443 10343501 chrX 10343660 10343719 16 218 4.5 6.5 5.5 2.5 276 chrX 10343443 intron CG43740 + chrX 10343581 intron CG43740 + chrX 10343719 intron CG43740 + chrX_16_10340001 chrX_10340001 CanS-JC 2496 chrX 10361683 10361740 chrX 10361807 10361850 15 121 3.0 6.0 4.5 2.7 167 chrX 10361683 intron l(1)G0289 - chrX 10361766 intron l(1)G0289 - chrX 10361850 intron l(1)G0289 - chrX_15_10360001 chrX_10360001 CanS-JC 2497 chrX 10550308 10550362 chrX 10550412 10550466 12 104 3.5 2.5 3.0 3.0 158 chrX 10550308 intron spri - chrX 10550387 intron spri - chrX 10550466 intron spri - chrX_12_10550001 chrX_10550001 CanS-JC 2498 chrX 10550831 10550878 chrX 10552324 10552371 hobo 10 1493 8.0 8.0 8.0 1.1 1540 chrX 10550831 intron spri - chrX 10551601 intron spri - chrX 10552371 intron spri - chrX_10_10550001 chrX_10550001 CanS-JC 2499 chrX 10686029 10686084 chrX 10691192 10691247 roo 16 5163 5.5 4.0 4.8 2.8 5218 chrX 10686029 intron X11Lbeta + chrX 10688638 intron X11Lbeta + chrX 10691247 intron X11Lbeta + chrX_16_10685001 chrX_10685001 CanS-JC 2500 chrX 10772654 10772691 chrX 10772763 10772800 Tirant 11 108 8.0 3.5 5.8 1.6 146 chrX 10772654 intron CG15211 + chrX 10772727 intron CG15211 + chrX 10772800 intron CG15211 + chrX_11_10770001 chrX_10770001 CanS-JC 2501 chrX 10803011 10803046 chrX 10803122 10803157 8 111 5.0 10.5 7.8 0.9 146 chrX 10803011 intron Imp - chrX 10803084 intron Imp - chrX 10803157 intron Imp - chrX_8_10800001 chrX_10800001 CanS-JC 2502 chrX 10816431 10816478 chrX 10816575 10816622 13 144 1.5 2.0 1.8 4.6 191 chrX 10816431 intron Imp - chrX 10816526 intron Imp - chrX 10816622 intron Imp - chrX_13_10815001 chrX_10815001 CanS-JC 2503 chrX 10876593 10876650 chrX 10876698 10876754 7 105 2.0 3.0 2.5 2.0 161 chrX 10876593 intron CG1637 - chrX 10876674 intron CG1637 - chrX 10876754 intron CG1637 - chrX_7_10875001 chrX_10875001 CanS-JC 2504 chrX 11095977 11096023 chrX 11103105 11103151 HMS-Beagle 8 7128 3.0 3.5 3.2 1.9 7174 chrX 11095977 intergenic not near genes chrX 11099564 intergenic not near genes chrX 11103151 intron CG42249 + chrX_8_11095001 chrX_11095001 CanS-JC 2505 chrX 11165887 11165902 chrX 11166245 11166260 4 358 2.5 6.0 4.2 0.8 373 chrX 11165887 intergenic not near genes chrX 11166074 intergenic not near genes chrX 11166260 intergenic not near genes chrX_4_11165001 chrX_11165001 CanS-JC 2506 chrX 11184239 11184265 chrX 11189341 11189367 flea 6 5102 3.0 4.0 3.5 1.3 5128 chrX 11184239 intergenic not near genes chrX 11186803 intergenic not near genes chrX 11189367 intergenic not near genes chrX_6_11185001 chrX_11185001 CanS-JC 2507 chrX 11191868 11191924 chrX 11191972 11192028 6 104 2.0 4.0 3.0 1.5 160 chrX 11191868 intergenic not near genes chrX 11191948 intergenic not near genes chrX 11192028 intergenic not near genes chrX_6_11190001 chrX_11190001 CanS-JC 2508 chrX 11205278 11205321 chrX 11205380 11205423 9 102 1.0 6.5 3.8 1.9 145 chrX 11205278 intergenic not near genes chrX 11205350 intergenic not near genes chrX 11205423 intergenic not near genes chrX_9_11205001 chrX_11205001 CanS-JC 2509 chrX 11312035 11312082 chrX 11319414 11319461 Stalker2 10 7379 15.5 5.0 10.2 0.9 7426 chrX 11312035 intergenic not near genes chrX 11315748 intergenic not near genes chrX 11319461 intergenic not near genes chrX_10_11315001 chrX_11315001 CanS-JC 2510 chrX 11384531 11384584 chrX 11384796 11384848 10 262 4.0 4.5 4.2 1.9 317 chrX 11384531 intron dlg1 + chrX 11384690 intron dlg1 + chrX 11384848 intron dlg1 + chrX_10_11380001 chrX_11380001 CanS-JC 2511 chrX 11633398 11633447 chrX 11640478 11640527 297 14 7080 2.5 5.0 3.8 2.9 7129 chrX 11633398 intron Ptp10D + chrX 11636962 intron Ptp10D + chrX 11640527 intron Ptp10D + chrX_14_11635001 chrX_11635001 CanS-JC 2512 chrX 11645089 11645107 chrX 11648284 11648302 NOF 7 3195 3.5 5.5 4.5 1.3 3213 chrX 11645089 intron Ptp10D + chrX 11646696 intron Ptp10D + chrX 11648302 intron Ptp10D + chrX_7_11645001 chrX_11645001 CanS-JC 2513 chrX 11648961 11648979 chrX 11649068 11649086 7 107 3.0 2.5 2.8 1.8 125 chrX 11648961 intron Ptp10D + chrX 11649024 intron Ptp10D + chrX 11649086 intron Ptp10D + chrX_7_11645001 chrX_11645001 CanS-JC 2514 chrX 11761981 11762001 chrX 11762086 11762106 13 105 2.5 10.0 6.2 1.8 125 chrX 11761981 intron m + chrX 11762044 intron m + chrX 11762106 intron m + chrX_13_11760001 chrX_11760001 CanS-JC 2515 chrX 11804678 11804690 chrX 11804808 11804820 5 130 1.5 5.5 3.5 1.1 142 chrX 11804678 intron Hsc70-3 - chrX 11804749 intron Hsc70-3 - chrX 11804820 intron Hsc70-3 - chrX_5_11800001 chrX_11800001 CanS-JC 2516 chrX 11822197 11822210 chrX 11822362 11822375 6 165 1.5 11.5 6.5 0.8 178 chrX 11822197 intron rudhira + chrX 11822286 intron rudhira + chrX 11822375 intron rudhira + chrX_6_11820001 chrX_11820001 CanS-JC 2517 chrX 11922343 11922380 chrX 11922502 11922539 17 158 3.5 3.0 3.2 4.0 196 chrX 11922343 exon Sclp - chrX 11922441 intron Sclp - chrX 11922539 intron Sclp - chrX_17_11920001 chrX_11920001 CanS-JC 2518 chrX 11936550 11936589 chrX 11936675 11936714 9 125 0.0 6.5 3.2 2.1 164 chrX 11936550 intron cac - chrX 11936632 intron cac - chrX 11936714 exon cac - chrX_9_11935001 chrX_11935001 CanS-JC 2519 chrX 12069033 12069080 chrX 12069146 12069193 17 113 6.5 3.5 5.0 2.8 160 chrX 12069033 intron,intron,3` UTR CR43960 +,Ten-a +,CR43961 - chrX 12069113 intron,intron,3` UTR CR43960 +,Ten-a +,CR43961 - chrX 12069193 intron,intron,3` UTR CR43960 +,Ten-a +,CR43961 - chrX_17_12065001 chrX_12065001 CanS-JC 2520 chrX 12094015 12094058 chrX 12094133 12094176 19 118 4.5 5.0 4.8 3.3 161 chrX 12094015 intron,intron CR43960 +,Ten-a + chrX 12094096 intron,intron CR43960 +,Ten-a + chrX 12094176 intron,intron CR43960 +,Ten-a + chrX_19_12090001 chrX_12090001 CanS-JC 2521 chrX 12168116 12168152 chrX 12173584 12173620 I-element 7 5468 3.5 2.0 2.8 1.8 5504 chrX 12168116 intron Ten-a + chrX 12170868 intron Ten-a + chrX 12173620 intron Ten-a + chrX_7_12170001 chrX_12170001 CanS-JC 2522 chrX 12191572 12191582 chrX 12191686 12191696 4 114 1.5 4.5 3.0 1.0 124 chrX 12191572 intron Ten-a + chrX 12191634 intron Ten-a + chrX 12191696 intron Ten-a + chrX_4_12190001 chrX_12190001 CanS-JC 2523 chrX 12202743 12202795 chrX 12202853 12202905 6 110 1.5 2.5 2.0 2.0 162 chrX 12202743 intron Ten-a + chrX 12202824 intron Ten-a + chrX 12202905 intron Ten-a + chrX_6_12200001 chrX_12200001 CanS-JC 2524 chrX 12511325 12511350 chrX 12511454 12511479 5 129 0.0 6.5 3.2 1.2 154 chrX 12511325 intron CG2556 + chrX 12511402 intron CG2556 + chrX 12511479 intron CG2556 + chrX_5_12510001 chrX_12510001 CanS-JC 2525 chrX 12521083 12521134 chrX 12521198 12521249 19 115 2.5 8.0 5.2 3.1 166 chrX 12521083 exon CG43921 - chrX 12521166 exon CG43921 - chrX 12521249 exon CG43921 - chrX_19_12520001 chrX_12520001 CanS-JC 2526 chrX 12557128 12557163 chrX 12557230 12557265 20 102 6.0 6.5 6.2 2.8 137 chrX 12557128 intron CG43921 - chrX 12557196 intron CG43921 - chrX 12557265 intron CG43921 - chrX_20_12555001 chrX_12555001 CanS-JC 2527 chrX 12562116 12562164 chrX 12562269 12562317 6 153 3.0 2.5 2.8 1.6 201 chrX 12562116 intron CG43921 - chrX 12562216 intron CG43921 - chrX 12562317 intron CG43921 - chrX_6_12560001 chrX_12560001 CanS-JC 2528 chrX 5190131 5190141 chrX 12649915 12649915 4 7459777 12.5 23.0 17.8 0.2 7459784 chrX 5190131 intron,intron CG15465 +,rg + chrX 8920023 intron,3` UTR rdgA +,CR44111 - chrX 12649915 intron Tomosyn + chrX_4_8920001 chrX_8920001 CanS-JC 2529 chrX 12681042 12681069 chrX 12681146 12681173 8 104 3.0 3.0 3.0 2.0 131 chrX 12681042 3` UTR Tis11 + chrX 12681108 3` UTR Tis11 + chrX 12681173 3` UTR Tis11 + chrX_8_12680001 chrX_12680001 CanS-JC 2530 chrX 12912012 12912053 chrX 12912598 12912639 10 586 2.0 0.0 1.0 5.0 627 chrX 12912012 3` UTR CG4645 + chrX 12912326 intergenic CR45625 +,CG4645 + chrX 12912639 5` UTR CR45625 + chrX_10_12910001 chrX_12910001 CanS-JC 2531 chrX 12930580 12930590 chrX 12937722 12937732 HMS-Beagle 4 7142 6.0 9.0 7.5 0.5 7152 chrX 12930580 intron fne + chrX 12934156 intron fne + chrX 12937732 intron fne + chrX_4_12930001 chrX_12930001 CanS-JC 2532 chrX 12953867 12953927 chrX 12954031 12954092 4 165 1.5 3.0 2.2 1.2 225 chrX 12953867 intron hec - chrX 12953980 intron hec - chrX 12954092 intron hec - chrX_4_12950001 chrX_12950001 CanS-JC 2533 chrX 12971661 12971689 chrX 12971764 12971792 7 103 6.0 3.0 4.5 1.3 131 chrX 12971661 intron,exon CR43636 -,CG15721 + chrX 12971726 intron,exon CR43636 -,CG15721 + chrX 12971792 intron,exon CR43636 -,CG15721 + chrX_7_12970001 chrX_12970001 CanS-JC 2534 chrX 12996395 12996426 chrX 12996498 12996529 11 103 2.0 2.5 2.2 3.4 134 chrX 12996395 intron rad + chrX 12996462 intron rad + chrX 12996529 intron rad + chrX_11_12995001 chrX_12995001 CanS-JC 2535 chrX 13061330 13061372 chrX 13061467 13061509 16 136 4.0 3.5 3.8 3.3 179 chrX 13061330 intron rad + chrX 13061420 intron rad + chrX 13061509 intron rad + chrX_16_13060001 chrX_13060001 CanS-JC 2536 chrX 13146576 13146630 chrX 13146690 13146744 16 114 2.5 4.0 3.2 3.8 168 chrX 13146576 intron CG32645 + chrX 13146660 intron CG32645 + chrX 13146744 intron CG32645 + chrX_16_13145001 chrX_13145001 CanS-JC 2537 chrX 13168542 13168570 chrX 13168669 13168697 7 127 2.5 5.5 4.0 1.4 155 chrX 13168542 intron CG34411 - chrX 13168620 intron CG34411 - chrX 13168697 intron CG34411 - chrX_7_13165001 chrX_13165001 CanS-JC 2538 chrX 13172324 13172381 chrX 13172426 13172483 13 102 5.0 5.5 5.2 2.1 159 chrX 13172324 exon CG34411 - chrX 13172404 intron CG34411 - chrX 13172483 intron CG34411 - chrX_13_13170001 chrX_13170001 CanS-JC 2539 chrX 13236856 13236902 chrX 13236964 13237013 10 111 0.0 5.5 2.8 2.6 157 chrX 13236856 intron mew - chrX 13236934 intron mew - chrX 13237013 intron mew - chrX_10_13235001 chrX_13235001 CanS-JC 2540 chrX 13269189 13269223 chrX 13269291 13269316 6 100 0.0 5.5 2.8 1.6 127 chrX 13269189 intron HDAC4 - chrX 13269252 intron HDAC4 - chrX 13269316 intron HDAC4 - chrX_6_13265001 chrX_13265001 CanS-JC 2541 chrX 13278132 13278168 chrX 13278241 13278277 13 109 9.5 1.5 5.5 2.0 145 chrX 13278132 intron HDAC4 - chrX 13278204 intron HDAC4 - chrX 13278277 intron HDAC4 - chrX_13_13275001 chrX_13275001 CanS-JC 2542 chrX 13374811 13374849 chrX 13374917 13374955 13 106 4.5 5.5 5.0 2.2 144 chrX 13374811 intron CG1640 + chrX 13374883 intron CG1640 + chrX 13374955 intron CG1640 + chrX_13_13370001 chrX_13370001 CanS-JC 2543 chrX 13401457 13401517 chrX 13401835 13401895 jockey 6 378 1.5 3.0 2.2 1.9 438 chrX 13401457 intergenic CG1673 +,CG12725 - chrX 13401676 intergenic CG12725 -,CG1673 + chrX 13401895 3` UTR CG12725 - chrX_6_13400001 chrX_13400001 CanS-JC 2544 chrX 13429445 13429472 chrX 13430620 13430647 jockey 7 1175 6.0 4.0 5.0 1.2 1202 chrX 13429445 intergenic not near genes chrX 13430046 intergenic not near genes chrX 13430647 intergenic not near genes chrX_7_13430001 chrX_13430001 CanS-JC 2545 chrX 13429479 13429489 chrX 13430613 13430664 jockey 4 1165 4.5 3.5 4.0 0.8 1185 chrX 13429479 intergenic not near genes chrX 13430072 intergenic not near genes chrX 13430664 intergenic not near genes chrX_4_13430001 chrX_13430001 CanS-JC 2546 chrX 13438733 13438756 chrX 13438850 13438873 8 117 10.0 2.5 6.2 1.1 140 chrX 13438733 intergenic not near genes chrX 13438803 intergenic not near genes chrX 13438873 intergenic not near genes chrX_8_13435001 chrX_13435001 CanS-JC 2547 chrX 13442122 13442162 chrX 13442236 13442279 13 116 1.0 6.0 3.5 2.9 157 chrX 13442122 intergenic not near genes chrX 13442200 intergenic not near genes chrX 13442279 intergenic not near genes chrX_13_13440001 chrX_13440001 CanS-JC 2548 chrX 13463626 13463675 chrX 13469229 13469278 mdg3 16 5602 4.0 4.5 4.2 3.1 5652 chrX 13463626 intron Neto + chrX 13466452 intron Neto + chrX 13469278 intron Neto + chrX_16_13465001 chrX_13465001 CanS-JC 2549 chrX 13550463 13550482 chrX 13550571 13550590 6 108 6.0 0.0 3.0 1.5 127 chrX 13550463 intergenic not near genes chrX 13550526 intergenic not near genes chrX 13550590 intergenic not near genes chrX_6_13550001 chrX_13550001 CanS-JC 2550 chrX 13593195 13593226 chrX 13593301 13593332 4 106 4.0 0.0 2.0 1.3 137 chrX 13593195 3` UTR Tango13 + chrX 13593264 intergenic Tango13 +,up - chrX 13593332 intergenic Tango13 +,up - chrX_4_13590001 chrX_13590001 CanS-JC 2551 chrX 13821446 13821470 chrX 13821549 13821573 8 103 5.0 7.0 6.0 1.1 127 chrX 13821446 intron Clic - chrX 13821510 intron Clic - chrX 13821573 intron Clic - chrX_8_13820001 chrX_13820001 CanS-JC 2552 chrX 13875934 13875973 chrX 13876039 13876083 6 109 1.5 0.0 0.8 3.3 149 chrX 13875934 intron mamo - chrX 13876008 intron mamo - chrX 13876083 intron mamo - chrX_6_13875001 chrX_13875001 CanS-JC 2553 chrX 13908772 13908788 chrX 13908876 13908879 8 102 5.0 4.5 4.8 1.4 107 chrX 13908772 intron mamo - chrX 13908826 intron mamo - chrX 13908879 intron mamo - chrX_8_13905001 chrX_13905001 CanS-JC 2554 chrX 13935489 13935518 chrX 13935598 13935627 5 109 8.5 10.0 9.2 0.5 138 chrX 13935489 intron mamo - chrX 13935558 intron mamo - chrX 13935627 intron mamo - chrX_5_13935001 chrX_13935001 CanS-JC 2555 chrX 13937961 13938002 chrX 13941258 13941299 I-element 6 3297 7.5 3.0 5.2 1.0 3338 chrX 13937961 intron mamo - chrX 13939630 intron mamo - chrX 13941299 intron mamo - chrX_6_13935001 chrX_13935001 CanS-JC 2556 chrX 13975873 13975903 chrX 13975976 13976006 10 103 0.0 5.5 2.8 2.6 133 chrX 13975873 intron mamo - chrX 13975940 intron mamo - chrX 13976006 intron mamo - chrX_10_13975001 chrX_13975001 CanS-JC 2557 chrX 14062365 14062376 chrX 14062471 14062481 4 106 0.0 12.5 6.2 0.6 116 chrX 14062365 intergenic not near genes chrX 14062423 intergenic not near genes chrX 14062481 intergenic not near genes chrX_4_14060001 chrX_14060001 CanS-JC 2558 chrX 14064138 14064173 chrX 14064261 14064288 6 122 0.0 2.0 1.0 3.0 150 chrX 14064138 intergenic not near genes chrX 14064213 intergenic not near genes chrX 14064288 intergenic not near genes chrX_6_14060001 chrX_14060001 CanS-JC 2559 chrX 14104997 14105049 chrX 14114174 14114226 roo 14 9177 6.0 5.5 5.8 2.1 9229 chrX 14104997 intergenic not near genes chrX 14109612 intergenic not near genes chrX 14114226 5` UTR CR44657 + chrX_14_14105001 chrX_14105001 CanS-JC 2560 chrX 14131472 14131519 chrX 14131579 14131626 18 107 3.0 6.5 4.8 3.1 154 chrX 14131472 intergenic not near genes chrX 14131549 intergenic not near genes chrX 14131626 intergenic not near genes chrX_18_14130001 chrX_14130001 CanS-JC 2561 chrX 14189854 14189895 chrX 14189975 14190016 10 121 3.0 6.0 4.5 1.8 162 chrX 14189854 exon CG11585 + chrX 14189935 exon CG11585 + chrX 14190016 exon CG11585 + chrX_10_14185001 chrX_14185001 CanS-JC 2562 chrX 14291650 14291701 chrX 14291986 14292037 13 336 5.5 6.5 6.0 1.9 387 chrX 14291650 intergenic not near genes chrX 14291844 intergenic not near genes chrX 14292037 intergenic not near genes chrX_13_14290001 chrX_14290001 CanS-JC 2563 chrX 14323220 14323273 chrX 14323652 14323705 11 432 2.0 5.5 3.8 2.3 485 chrX 14323220 intron dpr8 + chrX 14323462 intron dpr8 + chrX 14323705 intron dpr8 + chrX_11_14320001 chrX_14320001 CanS-JC 2564 chrX 14333270 14333317 chrX 14333378 14333425 15 107 0.0 6.0 3.0 3.8 155 chrX 14333270 intron dpr8 + chrX 14333348 intron dpr8 + chrX 14333425 intron dpr8 + chrX_15_14330001 chrX_14330001 CanS-JC 2565 chrX 14333797 14333839 chrX 14333921 14333963 14 124 1.5 2.5 2.0 4.7 166 chrX 14333797 intron dpr8 + chrX 14333880 intron dpr8 + chrX 14333963 intron dpr8 + chrX_14_14330001 chrX_14330001 CanS-JC 2566 chrX 14353411 14353445 chrX 14353519 14353554 6 109 6.5 3.0 4.8 1.0 143 chrX 14353411 intron dpr8 + chrX 14353482 intron dpr8 + chrX 14353554 intron dpr8 + chrX_6_14350001 chrX_14350001 CanS-JC 2567 chrX 14397028 14397079 chrX 14397143 14397194 21 113 2.5 3.0 2.8 5.5 166 chrX 14397028 intron dpr8 + chrX 14397111 intron dpr8 + chrX 14397194 intron dpr8 + chrX_21_14395001 chrX_14395001 CanS-JC 2568 chrX 14416302 14416321 chrX 14421095 14421114 F-element 6 4791 5.0 4.5 4.8 1.0 4812 chrX 14416302 intron dpr8 + chrX 14418708 intron dpr8 + chrX 14421114 intron dpr8 + chrX_6_14415001 chrX_14415001 CanS-JC 2569 chrX 14450069 14450128 chrX 14450245 14450304 12 176 3.5 2.0 2.8 3.2 235 chrX 14450069 intron dpr8 + chrX 14450186 intron dpr8 + chrX 14450304 intron dpr8 + chrX_12_14450001 chrX_14450001 CanS-JC 2570 chrX 14484855 14484860 chrX 14484962 14484967 5 107 0.0 4.0 2.0 1.7 112 chrX 14484855 intergenic not near genes chrX 14484911 intergenic not near genes chrX 14484967 intergenic not near genes chrX_5_14480001 chrX_14480001 CanS-JC 2571 chrX 14560249 14560293 chrX 14560358 14560403 9 109 5.5 4.0 4.8 1.6 154 chrX 14560249 intergenic not near genes chrX 14560326 intergenic not near genes chrX 14560403 intergenic not near genes chrX_9_14560001 chrX_14560001 CanS-JC 2572 chrX 14636447 14636489 chrX 14641914 14641956 I-element 16 5467 2.5 5.0 3.8 3.3 5509 chrX 14636447 intron NetA - chrX 14639202 intron NetA - chrX 14641956 intron NetA - chrX_16_14635001 chrX_14635001 CanS-JC 2573 chrX 14649328 14649336 chrX 14649430 14649438 4 102 0.0 11.5 5.8 0.6 110 chrX 14649328 intron NetA - chrX 14649383 intron NetA - chrX 14649438 intron NetA - chrX_4_14645001 chrX_14645001 CanS-JC 2574 chrX 14716833 14716866 chrX 14717200 14717233 13 367 4.0 5.0 4.5 2.4 400 chrX 14716833 intron NetB - chrX 14717033 intron NetB - chrX 14717233 intron NetB - chrX_13_14715001 chrX_14715001 CanS-JC 2575 chrX 14774957 14775007 chrX 14775060 14775111 10 101 6.0 6.5 6.2 1.4 154 chrX 14774957 intergenic CG5334 + chrX 14775034 intergenic CG5334 + chrX 14775111 intergenic CG5334 + chrX_10_14775001 chrX_14775001 CanS-JC 2576 chrX 14778012 14778046 chrX 14782835 14782869 Doc 9 4823 6.5 3.0 4.8 1.6 4857 chrX 14778012 intergenic CG5347 + chrX 14780440 intergenic not near genes chrX 14782869 intergenic Ag5r2 - chrX_9_14780001 chrX_14780001 CanS-JC 2577 chrX 14806731 14806775 chrX 14806845 14806889 10 114 7.0 0.0 3.5 2.2 158 chrX 14806731 intron rut - chrX 14806810 intron rut - chrX 14806889 intron rut - chrX_10_14805001 chrX_14805001 CanS-JC 2578 chrX 14818747 14818789 chrX 14823977 14824019 copia 13 5230 7.5 4.0 5.8 1.9 5272 chrX 14818747 intron rut - chrX 14821383 intron rut - chrX 14824019 intron rut - chrX_13_14820001 chrX_14820001 CanS-JC 2579 chrX 14936837 14936888 chrX 14946120 14946171 roo 13 9283 4.5 5.0 4.8 2.2 9334 chrX 14936837 intron pdgy - chrX 14941504 intron pdgy - chrX 14946171 intron pdgy - chrX_13_14940001 chrX_14940001 CanS-JC 2580 chrX 14968050 14968101 chrX 14968155 14968206 8 105 0.0 4.5 2.2 2.5 156 chrX 14968050 intron eag + chrX 14968128 intron eag + chrX 14968206 intron eag + chrX_8_14965001 chrX_14965001 CanS-JC 2581 chrX 14976499 14976553 chrX 14976967 14977021 9 468 3.0 5.5 4.2 1.7 522 chrX 14976499 intron eag + chrX 14976760 intron eag + chrX 14977021 intron eag + chrX_9_14975001 chrX_14975001 CanS-JC 2582 chrX 15127281 15127298 chrX 15127393 15127410 6 112 4.0 4.0 4.0 1.2 129 chrX 15127281 intron drd + chrX 15127346 intron drd + chrX 15127410 intron drd + chrX_6_15125001 chrX_15125001 CanS-JC 2583 chrX 15208504 15208553 chrX 15209010 15209059 18 505 3.5 4.5 4.0 3.6 555 chrX 15208504 intergenic not near genes chrX 15208782 intergenic not near genes chrX 15209059 intergenic not near genes chrX_18_15205001 chrX_15205001 CanS-JC 2584 chrX 15230485 15230516 chrX 15230649 15230679 12 159 8.0 5.5 6.8 1.5 194 chrX 15230485 intergenic not near genes chrX 15230582 intergenic not near genes chrX 15230679 intergenic not near genes chrX_12_15230001 chrX_15230001 CanS-JC 2585 chrX 15248240 15248290 chrX 15248342 15248392 11 101 3.0 6.5 4.8 1.9 152 chrX 15248240 intergenic not near genes chrX 15248316 intergenic not near genes chrX 15248392 intergenic not near genes chrX_11_15245001 chrX_15245001 CanS-JC 2586 chrX 15265853 15265863 chrX 15265962 15265972 7 109 9.0 10.0 9.5 0.7 119 chrX 15265853 intergenic not near genes chrX 15265912 intergenic not near genes chrX 15265972 intergenic not near genes chrX_7_15265001 chrX_15265001 CanS-JC 2587 chrX 15268853 15268893 chrX 15268958 15268988 19 104 4.0 5.0 4.5 3.5 135 chrX 15268853 intergenic not near genes chrX 15268920 intergenic not near genes chrX 15268988 intergenic not near genes chrX_19_15265001 chrX_15265001 CanS-JC 2588 chrX 15273686 15273727 chrX 15274879 15274920 1360 15 1193 4.0 6.5 5.2 2.4 1234 chrX 15273686 intergenic not near genes chrX 15274303 intergenic not near genes chrX 15274920 intergenic not near genes chrX_15_15270001 chrX_15270001 CanS-JC 2589 chrX 15326707 15326717 chrX 15326931 15326941 I-element 4 224 2.0 4.0 3.0 1.0 234 chrX 15326707 3` UTR Top1 + chrX 15326824 3` UTR Top1 + chrX 15326941 3` UTR Top1 + chrX_4_15325001 chrX_15325001 CanS-JC 2590 chrX 15369811 15369852 chrX 15369920 15369961 7 109 6.0 7.5 6.8 0.9 150 chrX 15369811 intron acj6 - chrX 15369886 intron acj6 - chrX 15369961 intron acj6 - chrX_7_15365001 chrX_15365001 CanS-JC 2591 chrX 15413030 15413079 chrX 15417358 15417407 Juan 13 4328 8.0 7.5 7.8 1.5 4377 chrX 15413030 intron Cngl - chrX 15415218 intron Cngl - chrX 15417407 intron Cngl - chrX_13_15415001 chrX_15415001 CanS-JC 2592 chrX 15421893 15421947 chrX 15423430 15423481 pogo 11 1537 1.0 4.0 2.5 3.1 1588 chrX 15421893 intron Cngl - chrX 15422687 intron Cngl - chrX 15423481 intron Cngl - chrX_11_15420001 chrX_15420001 CanS-JC 2593 chrX 15426158 15426197 chrX 15426280 15426319 15 122 2.0 1.5 1.8 5.4 161 chrX 15426158 intron Cngl - chrX 15426238 intron Cngl - chrX 15426319 intron Cngl - chrX_15_15425001 chrX_15425001 CanS-JC 2594 chrX 15666185 15666228 chrX 15666288 15666305 9 99 4.5 5.0 4.8 1.6 120 chrX 15666185 intergenic CR43299 - chrX 15666245 intergenic not near genes chrX 15666305 intergenic not near genes chrX_9_15665001 chrX_15665001 CanS-JC 2595 chrX 15678009 15678068 chrX 15678113 15678171 17 103 5.0 2.5 3.8 3.5 162 chrX 15678009 intergenic CG12708 + chrX 15678090 intergenic CG12708 + chrX 15678171 intergenic CG12708 + chrX_17_15675001 chrX_15675001 CanS-JC 2596 chrX 15681372 15681399 chrX 15681480 15681507 10 108 4.5 3.0 3.8 2.1 135 chrX 15681372 intergenic not near genes chrX 15681440 intergenic not near genes chrX 15681507 intergenic not near genes chrX_10_15680001 chrX_15680001 CanS-JC 2597 chrX 15749628 15749684 chrX 15749761 15749813 13 129 2.5 1.0 1.8 4.6 185 chrX 15749628 intron CG8239 + chrX 15749720 intron CG8239 + chrX 15749813 intron CG8239 + chrX_13_15745001 chrX_15745001 CanS-JC 2598 chrX 15824609 15824643 chrX 15824718 15824752 17 109 6.0 9.0 7.5 2.0 143 chrX 15824609 3` UTR sd + chrX 15824680 3` UTR sd + chrX 15824752 3` UTR sd + chrX_17_15820001 chrX_15820001 CanS-JC 2599 chrX 16100627 16100668 chrX 16100765 16100806 18 138 3.5 4.0 3.8 3.8 179 chrX 16100627 intron,intron CG42353 -,CG42354 - chrX 16100716 intron,intron CG42353 -,CG42354 - chrX 16100806 intron,intron CG42353 -,CG42354 - chrX_18_16100001 chrX_16100001 CanS-JC 2600 chrX 16222759 16222808 chrX 16231135 16231184 roo 13 8376 1.0 6.0 3.5 2.9 8425 chrX 16222759 intergenic not near genes chrX 16226972 intergenic not near genes chrX 16231184 intergenic not near genes chrX_13_16225001 chrX_16225001 CanS-JC 2601 chrX 16308881 16308942 chrX 16308990 16309050 12 108 1.0 3.0 2.0 4.0 169 chrX 16308881 intergenic CR45485 +,CG9914 - chrX 16308966 intergenic CR45485 +,CG9914 - chrX 16309050 intergenic CR45485 +,CG9914 - chrX_12_16305001 chrX_16305001 CanS-JC 2602 chrX 16340644 16340692 chrX 16349825 16349875 roo 9 9181 1.0 3.5 2.2 2.8 9231 chrX 16340644 intergenic Dsp1 + chrX 16345260 intergenic not near genes chrX 16349875 intergenic sl + chrX_9_16345001 chrX_16345001 CanS-JC 2603 chrX 16492624 16492653 chrX 16498227 16498256 mdg3 9 5603 5.0 5.5 5.2 1.5 5632 chrX 16492624 intron para - chrX 16495440 intron para - chrX 16498256 intron para - chrX_9_16495001 chrX_16495001 CanS-JC 2604 chrX 16650901 16650930 chrX 16651004 16651033 9 103 3.0 0.5 1.8 3.2 132 chrX 16650901 intergenic CG32573 +,CG42512 + chrX 16650967 intergenic CG32573 +,CG42512 + chrX 16651033 intergenic CG32573 +,CG42512 + chrX_9_16650001 chrX_16650001 CanS-JC 2605 chrX 16677317 16677329 chrX 16677478 16677490 4 161 0.0 4.5 2.2 1.2 173 chrX 16677317 intergenic not near genes chrX 16677404 intergenic not near genes chrX 16677490 intergenic not near genes chrX_4_16675001 chrX_16675001 CanS-JC 2606 chrX 16785251 16785299 chrX 16785381 16785429 17 130 3.0 3.5 3.2 4.0 178 chrX 16785251 3` UTR CG9609 - chrX 16785340 3` UTR CG9609 - chrX 16785429 3` UTR CG9609 - chrX_17_16785001 chrX_16785001 CanS-JC 2607 chrX 16853826 16853877 chrX 16853935 16853986 26 109 4.5 5.5 5.0 4.3 160 chrX 16853826 intron CG13003 - chrX 16853906 intron CG13003 - chrX 16853986 intron CG13003 - chrX_26_16850001 chrX_16850001 CanS-JC 2608 chrX 16870058 16870096 chrX 16870166 16870205 8 109 0.5 0.5 0.5 5.3 147 chrX 16870058 intron CG13003 - chrX 16870132 intron CG13003 - chrX 16870205 intron CG13003 - chrX_8_16870001 chrX_16870001 CanS-JC 2609 chrX 16891338 16891356 chrX 16891451 16891469 4 113 4.5 5.0 4.8 0.7 131 chrX 16891338 intergenic not near genes chrX 16891404 intergenic not near genes chrX 16891469 intergenic not near genes chrX_4_16890001 chrX_16890001 CanS-JC 2610 chrX 16936002 16936016 chrX 16936446 16936460 jockey 5 444 1.0 7.5 4.2 1.0 458 chrX 16936002 intron CG4928 + chrX 16936231 intron CG4928 + chrX 16936460 intron CG4928 + chrX_5_16935001 chrX_16935001 CanS-JC 2611 chrX 16936019 16936029 chrX 16936423 16936473 jockey 4 434 1.0 3.5 2.2 1.2 454 chrX 16936019 intron CG4928 + chrX 16936246 intron CG4928 + chrX 16936473 intron CG4928 + chrX_4_16935001 chrX_16935001 CanS-JC 2612 chrX 16993471 16993525 chrX 16993678 16993732 23 206 4.5 4.0 4.2 4.4 261 chrX 16993471 intron CG45002 - chrX 16993602 intron CG45002 - chrX 16993732 intron CG45002 - chrX_23_16990001 chrX_16990001 CanS-JC 2613 chrX 17011947 17011994 chrX 17012056 17012103 14 109 3.0 10.0 6.5 1.9 156 chrX 17011947 intron CG45002 - chrX 17012025 intron CG45002 - chrX 17012103 intron CG45002 - chrX_14_17010001 chrX_17010001 CanS-JC 2614 chrX 17031085 17031122 chrX 17031189 17031226 14 104 2.5 6.5 4.5 2.5 141 chrX 17031085 intron CG45002 - chrX 17031156 intron CG45002 - chrX 17031226 intron CG45002 - chrX_14_17030001 chrX_17030001 CanS-JC 2615 chrX 17063151 17063208 chrX 17063264 17063321 20 113 2.0 1.5 1.8 7.1 170 chrX 17063151 intron CG45002 - chrX 17063236 intron CG45002 - chrX 17063321 intron CG45002 - chrX_20_17060001 chrX_17060001 CanS-JC 2616 chrX 17121797 17121846 chrX 17121915 17121964 14 118 3.5 4.5 4.0 2.8 167 chrX 17121797 intron CG5004 + chrX 17121880 intron CG5004 + chrX 17121964 intron CG5004 + chrX_14_17120001 chrX_17120001 CanS-JC 2617 chrX 17122627 17122671 chrX 17122744 17122788 12 117 3.0 9.0 6.0 1.7 161 chrX 17122627 intron CG5004 + chrX 17122708 intron CG5004 + chrX 17122788 intron CG5004 + chrX_12_17120001 chrX_17120001 CanS-JC 2618 chrX 17195179 17195230 chrX 17200291 17200342 flea 15 5111 5.0 7.5 6.2 2.1 5163 chrX 17195179 3` UTR baz + chrX 17197760 3` UTR baz + chrX 17200342 3` UTR baz + chrX_15_17195001 chrX_17195001 CanS-JC 2619 chrX 17352573 17352619 chrX 17352693 17352748 10 128 0.0 4.0 2.0 3.3 175 chrX 17352573 intergenic not near genes chrX 17352660 intergenic not near genes chrX 17352748 intergenic not near genes chrX_10_17350001 chrX_17350001 CanS-JC 2620 chrX 17362465 17362511 chrX 17362583 17362629 9 118 4.0 2.0 3.0 2.2 164 chrX 17362465 intergenic not near genes chrX 17362547 intergenic not near genes chrX 17362629 intergenic not near genes chrX_9_17360001 chrX_17360001 CanS-JC 2621 chrX 17476438 17476489 chrX 17476541 17476592 15 103 5.0 9.0 7.0 1.9 154 chrX 17476438 intron CG43658 - chrX 17476515 intron CG43658 - chrX 17476592 intron CG43658 - chrX_15_17475001 chrX_17475001 CanS-JC 2622 chrX 17502324 17502368 chrX 17502430 17502474 17 105 2.5 7.0 4.8 2.9 150 chrX 17502324 intron CG43658 - chrX 17502399 intron CG43658 - chrX 17502474 intron CG43658 - chrX_17_17500001 chrX_17500001 CanS-JC 2623 chrX 17556920 17556928 chrX 17557445 17557453 mdg1 4 525 13.5 5.0 9.2 0.4 533 chrX 17556920 intron CG43658 - chrX 17557186 intron CG43658 - chrX 17557453 intron CG43658 - chrX_4_17555001 chrX_17555001 CanS-JC 2624 chrX 17680878 17680924 chrX 17680981 17681027 14 103 3.5 3.5 3.5 3.1 149 chrX 17680878 intron chas - chrX 17680952 intron chas - chrX 17681027 intron chas - chrX_14_17680001 chrX_17680001 CanS-JC 2625 chrX 17708815 17708857 chrX 17708918 17708962 6 104 3.5 6.5 5.0 1.0 147 chrX 17708815 intron CG8173 - chrX 17708888 intron CG8173 - chrX 17708962 intron CG8173 - chrX_6_17705001 chrX_17705001 CanS-JC 2626 chrX 17726444 17726457 chrX 17726549 17726562 5 105 9.5 5.0 7.2 0.6 118 chrX 17726444 intron CG42684 + chrX 17726503 intron CG42684 + chrX 17726562 intron CG42684 + chrX_5_17725001 chrX_17725001 CanS-JC 2627 chrX 17741311 17741362 chrX 17741483 17741534 7 172 2.5 3.5 3.0 1.8 223 chrX 17741311 intron CG42684 + chrX 17741422 intron CG42684 + chrX 17741534 intron CG42684 + chrX_7_17740001 chrX_17740001 CanS-JC 2628 chrX 17766330 17766374 chrX 17766454 17766498 13 124 4.0 4.0 4.0 2.6 168 chrX 17766330 intergenic not near genes chrX 17766414 intergenic not near genes chrX 17766498 intergenic not near genes chrX_13_17765001 chrX_17765001 CanS-JC 2629 chrX 17782196 17782220 chrX 17782320 17782344 10 124 4.5 5.0 4.8 1.7 148 chrX 17782196 intergenic not near genes chrX 17782270 intergenic not near genes chrX 17782344 intergenic not near genes chrX_10_17780001 chrX_17780001 CanS-JC 2630 chrX 17792936 17792976 chrX 17796260 17796300 flea 6 3324 9.5 11.0 10.2 0.5 3364 chrX 17792936 intron OdsH + chrX 17794618 intron OdsH + chrX 17796300 intron OdsH + chrX_6_17790001 chrX_17790001 CanS-JC 2631 chrX 17837357 17837382 chrX 17837460 17837482 15 103 1.5 5.0 3.2 3.6 125 chrX 17837357 intron CG6398 + chrX 17837420 intron CG6398 + chrX 17837482 intron CG6398 + chrX_15_17835001 chrX_17835001 CanS-JC 2632 chrX 17968870 17968922 chrX 17969015 17969066 5 144 3.5 2.5 3.0 1.2 196 chrX 17968870 intron Sh - chrX 17968968 intron Sh - chrX 17969066 intron Sh - chrX_5_17965001 chrX_17965001 CanS-JC 2633 chrX 18040422 18040451 chrX 18040531 18040565 4 113 3.0 3.0 3.0 1.0 143 chrX 18040422 intron Sh - chrX 18040494 intron Sh - chrX 18040565 intron Sh - chrX_4_18040001 chrX_18040001 CanS-JC 2634 chrX 18122791 18122830 chrX 18122893 18122932 12 102 8.0 2.5 5.2 1.9 141 chrX 18122791 5` UTR CR45606 + chrX 18122862 5` UTR CR45606 + chrX 18122932 intergenic CR45606 + chrX_12_18120001 chrX_18120001 CanS-JC 2635 chrX 18127912 18127966 chrX 18128023 18128077 17 111 3.5 4.5 4.0 3.4 165 chrX 18127912 intergenic mir-210 + chrX 18127994 intergenic mir-210 + chrX 18128077 intergenic mir-210 + chrX_17_18125001 chrX_18125001 CanS-JC 2636 chrX 18177001 18177046 chrX 18177120 18177165 9 119 3.5 0.0 1.8 3.2 164 chrX 18177001 intergenic not near genes chrX 18177083 intergenic not near genes chrX 18177165 intergenic Frq2 + chrX_9_18175001 chrX_18175001 CanS-JC 2637 chrX 18427360 18427407 chrX 18427797 18427844 12 437 1.0 5.0 3.0 3.0 484 chrX 18427360 intergenic CG42323 + chrX 18427602 intergenic not near genes chrX 18427844 intergenic not near genes chrX_12_18425001 chrX_18425001 CanS-JC 2638 chrX 18429476 18429520 chrX 18434813 18434857 Transpac 8 5337 3.5 7.5 5.5 1.2 5381 chrX 18429476 intergenic not near genes chrX 18432166 intergenic not near genes chrX 18434857 intergenic not near genes chrX_8_18430001 chrX_18430001 CanS-JC 2639 chrX 18453586 18453618 chrX 18453677 18453720 7 100 9.0 6.0 7.5 0.8 134 chrX 18453586 intron CG32547 - chrX 18453653 intron CG32547 - chrX 18453720 intron CG32547 - chrX_7_18450001 chrX_18450001 CanS-JC 2640 chrX 18529382 18529395 chrX 18529484 18529497 5 102 4.0 4.5 4.2 1.0 115 chrX 18529382 intron,3` UTR Bx +,CG15047 + chrX 18529440 intron,3` UTR Bx +,CG15047 + chrX 18529497 intron,3` UTR Bx +,CG15047 + chrX_5_18525001 chrX_18525001 CanS-JC 2641 chrX 18558759 18558805 chrX 18558867 18558913 8 108 1.5 5.5 3.5 1.8 154 chrX 18558759 intron Bx + chrX 18558836 intron Bx + chrX 18558913 intron Bx + chrX_8_18555001 chrX_18555001 CanS-JC 2642 chrX 18574777 18574824 chrX 18574882 18574930 17 104 0.0 5.0 2.5 4.9 153 chrX 18574777 intergenic not near genes chrX 18574854 intergenic not near genes chrX 18574930 intergenic not near genes chrX_17_18570001 chrX_18570001 CanS-JC 2643 chrX 18576077 18576101 chrX 18576181 18576205 8 104 1.0 4.5 2.8 2.1 128 chrX 18576077 intergenic not near genes chrX 18576141 intergenic not near genes chrX 18576205 intergenic not near genes chrX_8_18575001 chrX_18575001 CanS-JC 2644 chrX 18644996 18645041 chrX 18645120 18645165 9 124 4.5 4.0 4.2 1.7 169 chrX 18644996 intron Rip11 - chrX 18645080 intron Rip11 - chrX 18645165 intron Rip11 - chrX_9_18645001 chrX_18645001 CanS-JC 2645 chrX 18698823 18698878 chrX 18698966 18699021 12 143 1.5 5.0 3.2 2.9 198 chrX 18698823 intergenic not near genes chrX 18698922 intergenic not near genes chrX 18699021 intergenic not near genes chrX_12_18695001 chrX_18695001 CanS-JC 2646 chrX 18896492 18896548 chrX 18896629 18896685 17 137 3.0 4.0 3.5 3.8 193 chrX 18896492 3` UTR CG7349 + chrX 18896588 intergenic CG7349 + chrX 18896685 intergenic CG7349 + chrX_17_18895001 chrX_18895001 CanS-JC 2647 chrX 18957054 18957079 chrX 18965736 18965761 roo 5 8682 2.5 0.0 1.2 2.3 8707 chrX 18957054 intron CG43759 + chrX 18961408 intron CG43759 + chrX 18965761 intron CG43759 + chrX_5_18960001 chrX_18960001 CanS-JC 2648 chrX 19014336 19014390 chrX 19014441 19014488 15 104 8.0 4.0 6.0 2.1 152 chrX 19014336 intron CG43759 + chrX 19014412 intron CG43759 + chrX 19014488 intron CG43759 + chrX_15_19010001 chrX_19010001 CanS-JC 2649 chrX 19019938 19019971 chrX 19020092 19020124 8 154 1.5 2.5 2.0 2.7 186 chrX 19019938 intron CG43759 + chrX 19020031 intron CG43759 + chrX 19020124 intron CG43759 + chrX_8_19020001 chrX_19020001 CanS-JC 2650 chrX 19060388 19060428 chrX 19065198 19065238 Doc 15 4810 2.0 7.5 4.8 2.6 4850 chrX 19060388 intron CG14190 + chrX 19062813 intron CG14190 + chrX 19065238 intron CG14190 + chrX_15_19060001 chrX_19060001 CanS-JC 2651 chrX 19073664 19073696 chrX 19073777 19073809 7 113 6.5 3.5 5.0 1.2 145 chrX 19073664 intergenic not near genes chrX 19073736 intergenic not near genes chrX 19073809 intergenic not near genes chrX_7_19070001 chrX_19070001 CanS-JC 2652 chrX 19084068 19084098 chrX 19084214 19084244 11 146 5.5 0.0 2.8 2.9 176 chrX 19084068 intergenic CR45503 + chrX 19084156 intergenic CR45503 + chrX 19084244 intergenic CR45503 + chrX_11_19080001 chrX_19080001 CanS-JC 2653 chrX 19098740 19098760 chrX 19098860 19098880 8 120 0.5 2.5 1.5 3.2 140 chrX 19098740 intergenic not near genes chrX 19098810 intergenic not near genes chrX 19098880 intergenic not near genes chrX_8_19095001 chrX_19095001 CanS-JC 2654 chrX 19101193 19101206 chrX 19101334 19101347 5 140 3.0 0.0 1.5 2.0 154 chrX 19101193 intergenic not near genes chrX 19101270 intergenic not near genes chrX 19101347 intergenic not near genes chrX_5_19100001 chrX_19100001 CanS-JC 2655 chrX 19109115 19109135 chrX 19109325 19109345 11 210 0.0 9.0 4.5 2.0 230 chrX 19109115 intergenic not near genes chrX 19109230 intergenic not near genes chrX 19109345 intergenic not near genes chrX_11_19105001 chrX_19105001 CanS-JC 2656 chrX 19127176 19127220 chrX 19127289 19127333 15 113 4.5 1.0 2.8 3.9 157 chrX 19127176 exon tgy - chrX 19127254 exon tgy - chrX 19127333 intergenic tgy - chrX_15_19125001 chrX_19125001 CanS-JC 2657 chrX 19136528 19136582 chrX 19143472 19143472 412 9 6934 1.5 0.0 0.8 5.0 6944 chrX 19136528 intergenic not near genes chrX 19140000 intergenic not near genes chrX 19143472 3` UTR RhoGAP18B - chrX_9_19140001 chrX_19140001 CanS-JC 2658 chrX 19170567 19170589 chrX 19170670 19170692 11 103 9.5 5.0 7.2 1.3 125 chrX 19170567 5` UTR Inx5 - chrX 19170630 5` UTR Inx5 - chrX 19170692 5` UTR Inx5 - chrX_11_19170001 chrX_19170001 CanS-JC 2659 chrX 19176186 19176239 chrX 19176296 19176349 18 108 3.0 1.5 2.2 5.6 163 chrX 19176186 3` UTR CG7556 - chrX 19176268 3` UTR CG7556 - chrX 19176349 3` UTR CG7556 - chrX_18_19175001 chrX_19175001 CanS-JC 2660 chrX 19222697 19222753 chrX 19223107 19223163 17 410 1.5 3.5 2.5 4.9 466 chrX 19222697 intron CG7884 + chrX 19222930 intron CG7884 + chrX 19223163 intron CG7884 + chrX_17_19220001 chrX_19220001 CanS-JC 2661 chrX 19320204 19320253 chrX 19320318 19320367 14 114 8.0 6.0 7.0 1.8 163 chrX 19320204 intron out - chrX 19320286 intron out - chrX 19320367 intron out - chrX_14_19320001 chrX_19320001 CanS-JC 2662 chrX 19472103 19472145 chrX 19472699 19472741 jockey 5 596 5.5 9.0 7.2 0.6 638 chrX 19472103 intergenic kek5 + chrX 19472422 intergenic not near genes chrX 19472741 intergenic not near genes chrX_5_19470001 chrX_19470001 CanS-JC 2663 chrX 19668923 19668925 chrX 19669129 19669130 4 206 10.5 11.5 11.0 0.3 207 chrX 19668923 intron Zw + chrX 19669026 intron Zw + chrX 19669130 intron Zw + chrX_4_19665001 chrX_19665001 CanS-JC 2664 chrX 19710047 19710096 chrX 19711859 19711908 S-element 13 1811 8.0 4.5 6.2 1.8 1861 chrX 19710047 intron meso18E - chrX 19710978 intron meso18E - chrX 19711908 intron meso18E - chrX_13_19710001 chrX_19710001 CanS-JC 2665 chrX 19755501 19755554 chrX 19755612 19755665 13 111 1.5 5.5 3.5 2.9 164 chrX 19755501 intron Pmp70 + chrX 19755583 intron Pmp70 + chrX 19755665 intron Pmp70 + chrX_13_19755001 chrX_19755001 CanS-JC 2666 chrX 19762564 19762595 chrX 19762670 19762701 15 106 1.5 0.5 1.0 7.5 137 chrX 19762564 5` UTR CG12702 - chrX 19762632 5` UTR CG12702 - chrX 19762701 5` UTR CG12702 - chrX_15_19760001 chrX_19760001 CanS-JC 2667 chrX 19791234 19791289 chrX 19791354 19791409 15 119 1.0 4.0 2.5 4.3 175 chrX 19791234 intergenic not near genes chrX 19791322 intergenic not near genes chrX 19791409 intergenic not near genes chrX_15_19790001 chrX_19790001 CanS-JC 2668 chrX 19838479 19838526 chrX 19838583 19838622 10 103 10.0 5.5 7.8 1.1 143 chrX 19838479 intron pico - chrX 19838550 intron pico - chrX 19838622 intron pico - chrX_10_19835001 chrX_19835001 CanS-JC 2669 chrX 19880383 19880391 chrX 19880528 19880530 4 144 4.5 3.0 3.8 0.8 147 chrX 19880383 intron Hers + chrX 19880456 intron Hers + chrX 19880530 intron Hers + chrX_4_19880001 chrX_19880001 CanS-JC 2670 chrX 19884070 19884103 chrX 19884168 19884204 18 101 4.0 5.5 4.8 3.1 134 chrX 19884070 intron Hers + chrX 19884137 intron Hers + chrX 19884204 intron Hers + chrX_18_19880001 chrX_19880001 CanS-JC 2671 chrX 19983406 19983522 chrX 19983517 19983707 5 155 0.0 0.0 0.0 5.0 301 chrX 19983406 intergenic not near genes chrX 19983556 intergenic not near genes chrX 19983707 intergenic not near genes chrX_5_19980001 chrX_19980001 CanS-JC 2672 chrX 19992389 19992430 chrX 19992491 19992532 13 102 7.0 6.0 6.5 1.7 143 chrX 19992389 intergenic not near genes chrX 19992460 intergenic not near genes chrX 19992532 intergenic not near genes chrX_13_19990001 chrX_19990001 CanS-JC 2673 chrX 20041513 20041560 chrX 20041619 20041661 14 106 1.5 1.0 1.2 6.4 148 chrX 20041513 intron Dop2R - chrX 20041587 intron Dop2R - chrX 20041661 intron Dop2R - chrX_14_20040001 chrX_20040001 CanS-JC 2674 chrX 20069245 20069288 chrX 20069404 20069447 13 158 5.0 3.5 4.2 2.5 202 chrX 20069245 intergenic not near genes chrX 20069346 intergenic not near genes chrX 20069447 intergenic not near genes chrX_13_20065001 chrX_20065001 CanS-JC 2675 chrX 20090048 20090089 chrX 20090161 20090202 23 113 3.5 4.0 3.8 4.8 154 chrX 20090048 intergenic not near genes chrX 20090125 intergenic not near genes chrX 20090202 intergenic CR45628 + chrX_23_20090001 chrX_20090001 CanS-JC 2676 chrX 20126862 20126910 chrX 20126967 20127015 14 103 5.0 3.5 4.2 2.7 153 chrX 20126862 intergenic not near genes chrX 20126938 intergenic not near genes chrX 20127015 intergenic not near genes chrX_14_20125001 chrX_20125001 CanS-JC 2677 chrX 20132277 20132308 chrX 20132386 20132417 5 108 9.0 7.0 8.0 0.6 140 chrX 20132277 intergenic not near genes chrX 20132347 intergenic not near genes chrX 20132417 intergenic not near genes chrX_5_20130001 chrX_20130001 CanS-JC 2678 chrX 20144293 20144309 chrX 20144399 20144415 6 106 0.0 6.5 3.2 1.4 122 chrX 20144293 intergenic not near genes chrX 20144354 intergenic not near genes chrX 20144415 intergenic not near genes chrX_6_20140001 chrX_20140001 CanS-JC 2679 chrX 20144816 20144868 chrX 20145012 20145064 15 196 3.5 5.0 4.2 2.9 248 chrX 20144816 intergenic not near genes chrX 20144940 intergenic not near genes chrX 20145064 intergenic not near genes chrX_15_20140001 chrX_20140001 CanS-JC 2680 chrX 20263399 20263437 chrX 20263515 20263553 8 115 9.0 6.0 7.5 0.9 154 chrX 20263399 intergenic not near genes chrX 20263476 intergenic not near genes chrX 20263553 intergenic not near genes chrX_8_20260001 chrX_20260001 CanS-JC 2681 chrX 20271477 20271516 chrX 20271595 20271634 20 118 5.0 0.0 2.5 5.7 157 chrX 20271477 intergenic not near genes chrX 20271556 intergenic not near genes chrX 20271634 intergenic not near genes chrX_20_20270001 chrX_20270001 CanS-JC 2682 chrX 20312855 20312904 chrX 20312959 20313008 8 104 7.5 4.0 5.8 1.2 153 chrX 20312855 intron CG1504 - chrX 20312932 intron CG1504 - chrX 20313008 intron CG1504 - chrX_8_20310001 chrX_20310001 CanS-JC 2683 chrX 20314247 20314264 chrX 20314355 20314372 9 108 3.5 11.5 7.5 1.1 125 chrX 20314247 intron CG1504 - chrX 20314310 intron CG1504 - chrX 20314372 intron CG1504 - chrX_9_20310001 chrX_20310001 CanS-JC 2684 chrX 20320274 20320307 chrX 20320377 20320410 8 103 3.0 2.5 2.8 2.1 136 chrX 20320274 intron CG1504 - chrX 20320342 intron CG1504 - chrX 20320410 intron CG1504 - chrX_8_20320001 chrX_20320001 CanS-JC 2685 chrX 20374065 20374112 chrX 20374167 20374214 8 100 1.0 4.0 2.5 2.3 149 chrX 20374065 intergenic not near genes chrX 20374140 intergenic not near genes chrX 20374214 intergenic not near genes chrX_8_20370001 chrX_20370001 CanS-JC 2686 chrX 20377328 20377344 chrX 20378821 20378837 hobo 10 1493 3.5 9.5 6.5 1.3 1509 chrX 20377328 intergenic not near genes chrX 20378082 intergenic not near genes chrX 20378837 intergenic not near genes chrX_10_20375001 chrX_20375001 CanS-JC 2687 chrX 20415053 20415087 chrX 20415155 20415189 6 102 0.5 0.5 0.5 4.0 136 chrX 20415053 intergenic not near genes chrX 20415121 intergenic not near genes chrX 20415189 intergenic not near genes chrX_6_20415001 chrX_20415001 CanS-JC 2688 chrX 20426184 20426233 chrX 20428352 20428401 13 2169 40.0 38.5 39.2 0.3 2217 chrX 20426184 exon cactin + chrX 20427292 intergenic CG11710 -,CG15456 - chrX 20428401 exon CG11710 - chrX_13_20425001 chrX_20425001 CanS-JC 2689 chrX 20467999 20468020 chrX 20468106 20468135 5 113 6.5 0.0 3.2 1.2 136 chrX 20467999 intron GstT3 + chrX 20468067 intron GstT3 + chrX 20468135 intron GstT3 + chrX_5_20465001 chrX_20465001 CanS-JC 2690 chrX 20483812 20483873 chrX 20483960 20484021 22 148 4.5 3.0 3.8 4.6 209 chrX 20483812 intron RhoGAP19D - chrX 20483916 intron RhoGAP19D - chrX 20484021 intron RhoGAP19D - chrX_22_20480001 chrX_20480001 CanS-JC 2691 chrX 20531740 20531757 chrX 20531865 20531882 7 125 4.0 2.0 3.0 1.8 142 chrX 20531740 intergenic not near genes chrX 20531811 intergenic not near genes chrX 20531882 intergenic not near genes chrX_7_20530001 chrX_20530001 CanS-JC 2692 chrX 20546528 20546562 chrX 20546720 20546754 11 192 2.0 1.5 1.8 3.9 226 chrX 20546528 intron RunxB + chrX 20546641 intron RunxB + chrX 20546754 intron RunxB + chrX_11_20545001 chrX_20545001 CanS-JC 2693 chrX 20634404 20634441 chrX 20634515 20634552 6 111 10.0 3.5 6.8 0.8 148 chrX 20634404 intergenic not near genes chrX 20634478 intergenic not near genes chrX 20634552 intergenic not near genes chrX_6_20630001 chrX_20630001 CanS-JC 2694 chrX 20645322 20645360 chrX 20645546 20645584 14 224 2.5 2.0 2.2 4.4 262 chrX 20645322 intergenic not near genes chrX 20645453 intergenic not near genes chrX 20645584 intergenic not near genes chrX_14_20645001 chrX_20645001 CanS-JC 2695 chrX 20662289 20662342 chrX 20662398 20662447 5 107 2.5 0.0 1.2 2.3 158 chrX 20662289 intron CG1835 + chrX 20662368 intron CG1835 + chrX 20662447 intron CG1835 + chrX_5_20660001 chrX_20660001 CanS-JC 2696 chrX 20719172 20719201 chrX 20719531 20719560 5 359 3.0 4.0 3.5 1.1 388 chrX 20719172 intergenic not near genes chrX 20719366 intergenic not near genes chrX 20719560 intergenic not near genes chrX_5_20715001 chrX_20715001 CanS-JC 2697 chrX 20721729 20721874 chrX 20721872 20721997 4 132 0.0 0.0 0.0 4.0 268 chrX 20721729 intergenic not near genes chrX 20721863 intergenic not near genes chrX 20721997 intergenic not near genes chrX_4_20720001 chrX_20720001 CanS-JC 2698 chrX 20780200 20780238 chrX 20780451 20780489 16 251 3.0 2.5 2.8 4.2 289 chrX 20780200 intron,3` UTR shakB -,CG32507 - chrX 20780344 intron,3` UTR shakB -,CG32507 - chrX 20780489 intron,3` UTR shakB -,CG32507 - chrX_16_20780001 chrX_20780001 CanS-JC 2699 chrX 20791531 20791587 chrX 20791657 20791713 5 126 4.0 2.0 3.0 1.2 182 chrX 20791531 intron shakB - chrX 20791622 intron shakB - chrX 20791713 intron shakB - chrX_5_20790001 chrX_20790001 CanS-JC 2700 chrX 20836710 20836756 chrX 20844338 20844384 roo 8 7626 5.0 5.0 5.0 1.3 7674 chrX 20836710 intron shakB - chrX 20840547 intron shakB - chrX 20844384 intron shakB - chrX_8_20840001 chrX_20840001 CanS-JC 2701 chrX 20940698 20940737 chrX 20942193 20942232 hobo 8 1495 4.5 0.5 2.5 2.3 1534 chrX 20940698 intergenic not near genes chrX 20941465 intergenic not near genes chrX 20942232 intergenic not near genes chrX_8_20940001 chrX_20940001 CanS-JC 2702 chrX 20974175 20974203 chrX 20974385 20974413 10 210 3.0 7.0 5.0 1.7 238 chrX 20974175 intergenic not near genes chrX 20974294 intergenic not near genes chrX 20974413 intergenic not near genes chrX_10_20970001 chrX_20970001 CanS-JC 2703 chrX 21016340 21016366 chrX 21016451 21016477 6 111 7.5 5.0 6.2 0.8 137 chrX 21016340 intergenic not near genes chrX 21016408 intergenic not near genes chrX 21016477 intergenic not near genes chrX_6_21015001 chrX_21015001 CanS-JC 2704 chrX 21022249 21022265 chrX 21022444 21022460 9 195 17.0 7.0 12.0 0.7 211 chrX 21022249 intergenic not near genes chrX 21022354 intergenic not near genes chrX 21022460 intergenic not near genes chrX_9_21020001 chrX_21020001 CanS-JC 2705 chrX 21029166 21029180 chrX 21029409 21029419 7 242 1.0 7.0 4.0 1.4 253 chrX 21029166 3` UTR CG1529 - chrX 21029292 3` UTR CG1529 - chrX 21029419 3` UTR CG1529 - chrX_7_21025001 chrX_21025001 CanS-JC 2706 chrX 21029789 21029806 chrX 21029956 21029973 6 167 3.5 3.0 3.2 1.4 184 chrX 21029789 3` UTR CG1529 - chrX 21029881 3` UTR CG1529 - chrX 21029973 3` UTR CG1529 - chrX_6_21025001 chrX_21025001 CanS-JC 2707 chrX 21055667 21055726 chrX 21055769 21055828 10 102 2.0 2.5 2.2 3.1 161 chrX 21055667 intron bves + chrX 21055748 intron bves + chrX 21055828 intron bves + chrX_10_21055001 chrX_21055001 CanS-JC 2708 chrX 21061834 21061891 chrX 21062349 21062403 roo 4 512 3.5 2.5 3.0 1.0 569 chrX 21061834 intron bves + chrX 21062118 intron bves + chrX 21062403 intron,3` UTR bves +,CG32512 - chrX_4_21060001 chrX_21060001 CanS-JC 2709 chrX 21076315 21076358 chrX 21076420 21076463 11 105 4.0 0.0 2.0 3.7 148 chrX 21076315 intron bves + chrX 21076389 intron bves + chrX 21076463 intron bves + chrX_11_21075001 chrX_21075001 CanS-JC 2710 chrX 21077570 21077619 chrX 21077685 21077734 15 112 1.0 3.5 2.2 4.7 164 chrX 21077570 intron bves + chrX 21077652 intron bves + chrX 21077734 intron bves + chrX_15_21075001 chrX_21075001 CanS-JC 2711 chrX 21078750 21078782 chrX 21078848 21078886 10 102 1.0 0.5 0.8 5.6 136 chrX 21078750 intron bves + chrX 21078818 intron bves + chrX 21078886 intron bves + chrX_10_21075001 chrX_21075001 CanS-JC 2712 chrX 21086113 21086148 chrX 21087168 21087203 jockey 10 1055 7.5 9.5 8.5 1.1 1090 chrX 21086113 intergenic not near genes chrX 21086658 intergenic not near genes chrX 21087203 intergenic not near genes chrX_10_21085001 chrX_21085001 CanS-JC 2713 chrX 21088015 21088064 chrX 21088173 21088222 10 158 3.0 1.5 2.2 3.1 207 chrX 21088015 intergenic not near genes chrX 21088118 intergenic not near genes chrX 21088222 intergenic not near genes chrX_10_21085001 chrX_21085001 CanS-JC 2714 chrX 21166128 21166167 chrX 21166232 21166274 7 105 2.0 3.0 2.5 2.0 146 chrX 21166128 intergenic not near genes chrX 21166201 intergenic not near genes chrX 21166274 intergenic not near genes chrX_7_21165001 chrX_21165001 CanS-JC 2715 chrX 21166431 21166467 chrX 21166543 21166579 12 112 4.5 3.5 4.0 2.4 148 chrX 21166431 intergenic not near genes chrX 21166505 intergenic not near genes chrX 21166579 intergenic not near genes chrX_12_21165001 chrX_21165001 CanS-JC 2716 chrX 21188820 21188836 chrX 21188934 21188950 5 114 5.5 9.5 7.5 0.6 130 chrX 21188820 intergenic CR45506 + chrX 21188885 intergenic CR45506 + chrX 21188950 intergenic CR45506 + chrX_5_21185001 chrX_21185001 CanS-JC 2717 chrX 21188839 21188872 chrX 21188927 21188986 9 111 3.0 8.5 5.8 1.3 147 chrX 21188839 intergenic CR45506 + chrX 21188912 intergenic CR45506 + chrX 21188986 intergenic CR45506 + chrX_9_21185001 chrX_21185001 CanS-JC 2718 chrX 21253271 21253293 chrX 21253373 21253396 5 103 11.5 5.0 8.2 0.5 125 chrX 21253271 intron CG32521 - chrX 21253334 intron CG32521 - chrX 21253396 intron CG32521 - chrX_5_21250001 chrX_21250001 CanS-JC 2719 chrX 21308850 21308874 chrX 21308982 21309026 4 142 5.5 0.0 2.8 1.1 176 chrX 21308850 exon CG1801 - chrX 21308938 intron CG1801 - chrX 21309026 intron CG1801 - chrX_4_21305001 chrX_21305001 CanS-JC 2720 chrX 21328099 21328132 chrX 21328236 21328269 9 137 3.0 1.5 2.2 2.8 170 chrX 21328099 3` UTR CG1486 + chrX 21328184 intergenic CG1486 +,tty - chrX 21328269 intergenic CG1486 +,tty - chrX_9_21325001 chrX_21325001 CanS-JC 2721 chrX 21404914 21404970 chrX 21405139 21405195 18 225 28.0 37.0 32.5 0.5 281 chrX 21404914 intergenic not near genes chrX 21405054 intergenic not near genes chrX 21405195 intergenic not near genes chrX_18_21405001 chrX_21405001 CanS-JC 2722 chrX 21410619 21410673 chrX 21410724 21410779 11 106 0.5 1.5 1.0 5.5 160 chrX 21410619 intergenic CR45003 - chrX 21410699 intergenic CR45003 - chrX 21410779 intergenic CR45003 - chrX_11_21410001 chrX_21410001 CanS-JC 2723 chrX 21455221 21455242 chrX 21455434 21455455 5 213 4.5 6.5 5.5 0.8 234 chrX 21455221 intron CG42343 - chrX 21455338 intron CG42343 - chrX 21455455 intron CG42343 - chrX_5_21455001 chrX_21455001 CanS-JC 2724 chrX 21458692 21458726 chrX 21464154 21464188 Ivk 16 5461 3.0 11.0 7.0 2.0 5496 chrX 21458692 intergenic not near genes chrX 21461440 intergenic not near genes chrX 21464188 intergenic not near genes chrX_16_21460001 chrX_21460001 CanS-JC 2725 chrX 21474381 21474434 chrX 21474773 21474826 1731 15 391 4.5 4.0 4.2 2.9 445 chrX 21474381 intergenic not near genes chrX 21474604 intergenic not near genes chrX 21474826 intergenic not near genes chrX_15_21470001 chrX_21470001 CanS-JC 2726 chrX 21516959 21517019 chrX 21517064 21517124 18 104 4.5 5.0 4.8 3.1 165 chrX 21516959 intron CR45082 - chrX 21517042 intron CR45082 - chrX 21517124 intron CR45082 - chrX_18_21515001 chrX_21515001 CanS-JC 2727 chrX 21565399 21565437 chrX 21565503 21565519 16 103 1.5 5.5 3.5 3.6 120 chrX 21565399 intergenic not near genes chrX 21565459 intergenic not near genes chrX 21565519 intergenic not near genes chrX_16_21565001 chrX_21565001 CanS-JC 2728 chrX 21624890 21624921 chrX 21625006 21625037 10 116 6.0 4.0 5.0 1.7 147 chrX 21624890 3` UTR DIP1 - chrX 21624964 3` UTR DIP1 - chrX 21625037 3` UTR DIP1 - chrX_10_21620001 chrX_21620001 CanS-JC 2729 chrX 21668245 21668250 chrX 21668356 21668361 4 111 12.0 1.0 6.5 0.5 116 chrX 21668245 intergenic not near genes chrX 21668303 intergenic not near genes chrX 21668361 intergenic not near genes chrX_4_21665001 chrX_21665001 CanS-JC 2730 chrX 22448243 22448289 chrX 22448408 22448454 10 165 3.0 5.5 4.2 1.9 211 chrX 22448243 intron CG14615 - chrX 22448348 intron CG14615 - chrX 22448454 intron CG14615 - chrX_10_22445001 chrX_22445001 CanS-JC 2731 chrX 22478870 22478898 chrX 22479029 22479057 7 159 0.0 2.5 1.2 3.2 187 chrX 22478870 intron CG12576 - chrX 22478964 intron CG12576 - chrX 22479057 intron CG12576 - chrX_7_22475001 chrX_22475001 CanS-JC 2732 chrX 22564564 22564579 chrX 22575110 22575125 jockey 5 10546 15.0 8.0 11.5 0.4 10561 chrX 22564564 intergenic not near genes chrX 22569844 intergenic not near genes chrX 22575125 intergenic not near genes chrX_5_22565001 chrX_22565001 CanS-JC 2733 chrX 22613160 22613194 chrX 22614343 22614377 8 1183 6.0 1.5 3.8 1.7 1217 chrX 22613160 intron Cda4 - chrX 22613768 intron Cda4 - chrX 22614377 intron Cda4 - chrX_8_22610001 chrX_22610001 CanS-JC 2734 chrX 22660550 22660603 chrX 22660660 22660713 6 110 6.0 1.5 3.8 1.2 163 chrX 22660550 intron CR44997 + chrX 22660632 intron CR44997 + chrX 22660713 intron CR44997 + chrX_6_22660001 chrX_22660001 CanS-JC 2735 chrX 22665769 22665828 chrX 22665874 22665933 13 105 6.0 5.0 5.5 2.0 164 chrX 22665769 intron CR44997 + chrX 22665851 intron CR44997 + chrX 22665933 intron CR44997 + chrX_13_22665001 chrX_22665001 CanS-JC 2736 chrX 22694298 22694350 chrX 22694414 22694467 4 116 4.0 1.5 2.8 1.1 169 chrX 22694298 intron CR44997 + chrX 22694382 intron CR44997 + chrX 22694467 intron CR44997 + chrX_4_22690001 chrX_22690001 CanS-JC 2737 chrX 22697477 22697520 chrX 22701800 22701843 Juan 10 4323 3.5 4.0 3.8 2.1 4366 chrX 22697477 intron CR44997 + chrX 22699660 intron CR44997 + chrX 22701843 intron CR44997 + chrX_10_22695001 chrX_22695001 CanS-JC 2738 chrX 22771481 22771530 chrX 22774798 22774847 297 12 3317 4.0 5.5 4.8 2.1 3366 chrX 22771481 intron CR44997 + chrX 22773164 intron CR44997 + chrX 22774847 intron CR44997 + chrX_12_22770001 chrX_22770001 CanS-JC 2739 chrX 22784058 22784088 chrX 22784167 22784197 9 109 3.0 2.0 2.5 2.6 139 chrX 22784058 intron CR44997 + chrX 22784128 intron CR44997 + chrX 22784197 intron CR44997 + chrX_9_22780001 chrX_22780001 CanS-JC 2740 chrX 22796972 22797019 chrX 22797083 22797130 4 111 1.5 5.5 3.5 0.9 158 chrX 22796972 intron CR44997 + chrX 22797051 intron CR44997 + chrX 22797130 intron CR44997 + chrX_4_22795001 chrX_22795001 CanS-JC 2741 chrX 22811986 22812002 chrX 22816784 22816800 F-element 4 4798 9.5 5.0 7.2 0.5 4814 chrX 22811986 intergenic CG12446 - chrX 22814393 intergenic not near genes chrX 22816800 intergenic not near genes chrX_4_22810001 chrX_22810001 CanS-JC 2742 chrX 22824222 22824438 chrX 22824374 22824597 14 157 2.0 2.0 2.0 4.7 375 chrX 22824222 intergenic fog - chrX 22824410 3` UTR fog - chrX 22824597 3` UTR fog - chrX_14_22820001 chrX_22820001 CanS-JC 2743 chrX 22862385 22862389 chrX 22862572 22862576 6 187 21.0 13.5 17.2 0.3 191 chrX 22862385 intron CG42346 + chrX 22862480 intron CG42346 + chrX 22862576 intron CG42346 + chrX_6_22860001 chrX_22860001 CanS-JC 2744 chrX 22869152 22869160 chrX 22869255 22869263 8 102 5.5 6.0 5.8 1.2 111 chrX 22869152 intron CG42346 + chrX 22869208 intron CG42346 + chrX 22869263 intron CG42346 + chrX_8_22865001 chrX_22865001 CanS-JC 2745 chrX 22870852 22870898 chrX 22870969 22871015 8 117 3.5 3.0 3.2 1.9 163 chrX 22870852 intron,3` UTR CG42346 +,CR43656 - chrX 22870934 intron,3` UTR CG42346 +,CR43656 - chrX 22871015 intron,3` UTR CG42346 +,CR43656 - chrX_8_22870001 chrX_22870001 CanS-JC 2746 chrX 22922504 22922541 chrX 22922610 22922647 10 106 2.5 4.0 3.2 2.4 143 chrX 22922504 intergenic not near genes chrX 22922576 intergenic not near genes chrX 22922647 intergenic not near genes chrX_10_22920001 chrX_22920001 CanS-JC 2747 chrX 22987084 22987127 chrX 22989769 22989812 Burdock 4 2685 5.0 5.5 5.2 0.6 2728 chrX 22987084 intron,intron stnA -,stnB - chrX 22988448 intron,intron stnA -,stnB - chrX 22989812 intron,intron stnA -,stnB - chrX_4_22985001 chrX_22985001 CanS-JC 2748 chrX 22996288 22996336 chrX 23003548 23003596 roo 14 7260 3.5 6.0 4.8 2.4 7308 chrX 22996288 intron,intron stnA -,stnB - chrX 22999942 intron,intron stnA -,stnB - chrX 23003596 intron,intron stnA -,stnB - chrX_14_22995001 chrX_22995001 CanS-JC