SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 25370 25386 chr2L 25729 25745 9 359 61.0 47.5 54.2 0.2 375 chr2L 25370 intergenic Cda5 -,Ir21a - chr2L 25558 3` UTR Cda5 - chr2L 25745 3` UTR Cda5 - chr2L_9_25001 chr2L_25001 RAL-913 2 chr2L 46310 46377 chr2L 46438 46505 29 128 12.5 10.0 11.2 2.4 195 chr2L 46310 intron Cda5 - chr2L 46408 intron Cda5 - chr2L 46505 intron Cda5 - chr2L_29_45001 chr2L_45001 RAL-913 3 chr2L 47424 47474 chr2L 52578 52629 jockey 31 5152 16.0 13.0 14.5 2.0 5205 chr2L 47424 intron Cda5 - chr2L 50026 intron Cda5 - chr2L 52629 intron Cda5 - chr2L_31_50001 chr2L_50001 RAL-913 4 chr2L 89672 89739 chr2L 89799 89809 33 122 11.5 14.0 12.8 2.4 137 chr2L 89672 intergenic not near genes chr2L 89740 intergenic not near genes chr2L 89809 intergenic not near genes chr2L_33_85001 chr2L_85001 RAL-913 5 chr2L 172012 172021 chr2L 172143 172152 6 131 19.5 8.5 14.0 0.4 140 chr2L 172012 intron spen + chr2L 172082 intron spen + chr2L 172152 intron spen + chr2L_6_170001 chr2L_170001 RAL-913 6 chr2L 172024 172080 chr2L 172140 172211 30 130 9.0 8.5 8.8 3.1 187 chr2L 172024 intron spen + chr2L 172118 intron spen + chr2L 172211 intron spen + chr2L_30_170001 chr2L_170001 RAL-913 7 chr2L 179412 179431 chr2L 179545 179559 9 132 16.5 8.0 12.2 0.7 147 chr2L 179412 intron spen + chr2L 179486 intron spen + chr2L 179559 intron spen + chr2L_9_175001 chr2L_175001 RAL-913 8 chr2L 179432 179487 chr2L 179539 179600 19 129 6.5 8.0 7.2 2.3 168 chr2L 179432 intron spen + chr2L 179516 intron spen + chr2L 179600 intron spen + chr2L_19_175001 chr2L_175001 RAL-913 9 chr2L 263271 263316 chr2L 263467 263512 17 196 3.5 11.5 7.5 2.0 241 chr2L 263271 intron,3` UTR CG3645 -,CG17075 - chr2L 263392 intron,3` UTR CG3645 -,CG17075 - chr2L 263512 intron,3` UTR CG3645 -,CG17075 - chr2L_17_260001 chr2L_260001 RAL-913 10 chr2L 297638 297712 chr2L 297788 297862 20 147 10.0 6.0 8.0 2.2 224 chr2L 297638 intergenic Hop +,Pi3K21B + chr2L 297750 intergenic Pi3K21B +,Hop + chr2L 297862 intergenic Pi3K21B +,Hop + chr2L_20_295001 chr2L_295001 RAL-913 11 chr2L 314090 314142 chr2L 314217 314269 19 126 9.0 10.0 9.5 1.8 179 chr2L 314090 intron Plc21C + chr2L 314180 intron Plc21C + chr2L 314269 intron Plc21C + chr2L_19_310001 chr2L_310001 RAL-913 12 chr2L 323407 323420 chr2L 323535 323548 4 127 19.0 6.0 12.5 0.3 141 chr2L 323407 intron Plc21C + chr2L 323478 intron Plc21C + chr2L 323548 intron Plc21C + chr2L_4_320001 chr2L_320001 RAL-913 13 chr2L 323422 323486 chr2L 323534 323614 34 125 5.5 6.0 5.8 5.0 192 chr2L 323422 intron Plc21C + chr2L 323518 intron Plc21C + chr2L 323614 intron Plc21C + chr2L_34_320001 chr2L_320001 RAL-913 14 chr2L 325095 325144 chr2L 325222 325271 31 122 8.5 15.5 12.0 2.4 176 chr2L 325095 intron Plc21C + chr2L 325183 intron Plc21C + chr2L 325271 intron Plc21C + chr2L_31_325001 chr2L_325001 RAL-913 15 chr2L 347844 347916 chr2L 355394 355423 blood 33 7547 5.5 10.0 7.8 3.7 7579 chr2L 347844 3` UTR Plc21C + chr2L 351634 intron Plc21C + chr2L 355423 3` UTR Plc21C + chr2L_33_350001 chr2L_350001 RAL-913 16 chr2L 358781 358825 chr2L 358907 358929 10 118 7.5 13.0 10.2 0.9 148 chr2L 358781 intergenic not near genes chr2L 358855 intergenic not near genes chr2L 358929 intergenic not near genes chr2L_10_355001 chr2L_355001 RAL-913 17 chr2L 371392 371455 chr2L 371521 371584 23 129 8.5 10.5 9.5 2.2 192 chr2L 371392 intergenic not near genes chr2L 371488 intergenic not near genes chr2L 371584 intergenic not near genes chr2L_23_370001 chr2L_370001 RAL-913 18 chr2L 407898 407972 chr2L 408029 408103 30 131 9.5 14.0 11.8 2.3 205 chr2L 407898 3` UTR RpI135 + chr2L 408000 intergenic AP-2alpha -,RpI135 + chr2L 408103 3` UTR AP-2alpha - chr2L_30_405001 chr2L_405001 RAL-913 19 chr2L 436830 436900 chr2L 436957 437027 33 126 15.0 13.5 14.2 2.2 197 chr2L 436830 intron ex + chr2L 436928 intron ex + chr2L 437027 intron ex + chr2L_33_435001 chr2L_435001 RAL-913 20 chr2L 467319 467355 chr2L 467468 467504 20 148 15.0 17.0 16.0 1.2 185 chr2L 467319 intron CG4297 - chr2L 467412 intron CG4297 - chr2L 467504 intron CG4297 - chr2L_20_465001 chr2L_465001 RAL-913 21 chr2L 509782 509849 chr2L 509977 510044 32 195 8.0 9.0 8.5 3.4 262 chr2L 509782 intron ush + chr2L 509913 intron ush + chr2L 510044 intron ush + chr2L_32_505001 chr2L_505001 RAL-913 22 chr2L 558778 558851 chr2L 559064 559080 49 282 7.0 9.5 8.2 5.3 302 chr2L 558778 intron rempA - chr2L 558929 intron rempA - chr2L 559080 intron rempA - chr2L_49_555001 chr2L_555001 RAL-913 23 chr2L 581717 581759 chr2L 581832 581889 5 116 13.0 3.5 8.2 0.5 172 chr2L 581717 intergenic not near genes chr2L 581803 intergenic not near genes chr2L 581889 intergenic not near genes chr2L_5_580001 chr2L_580001 RAL-913 24 chr2L 602218 602271 chr2L 602381 602434 27 163 6.0 14.0 10.0 2.5 216 chr2L 602218 intergenic not near genes chr2L 602326 intergenic CG13689 + chr2L 602434 intergenic CG13689 + chr2L_27_600001 chr2L_600001 RAL-913 25 chr2L 603972 604037 chr2L 604843 604907 26 861 7.0 10.0 8.5 2.7 935 chr2L 603972 3` UTR CG13689 + chr2L 604440 intergenic CG13689 + chr2L 604907 intergenic CG13689 + chr2L_26_600001 chr2L_600001 RAL-913 26 chr2L 666232 666235 chr2L 666358 666361 4 126 4.5 3.0 3.8 0.8 129 chr2L 666232 intron ds - chr2L 666296 intron ds - chr2L 666361 intron ds - chr2L_4_665001 chr2L_665001 RAL-913 27 chr2L 666237 666246 chr2L 666356 666372 6 125 4.5 3.5 4.0 1.2 135 chr2L 666237 intron ds - chr2L 666304 intron ds - chr2L 666372 intron ds - chr2L_6_665001 chr2L_665001 RAL-913 28 chr2L 666249 666309 chr2L 666355 666454 23 129 4.5 3.0 3.8 4.8 205 chr2L 666249 intron ds - chr2L 666352 intron ds - chr2L 666454 intron ds - chr2L_23_665001 chr2L_665001 RAL-913 29 chr2L 686913 686939 chr2L 695993 696029 roo 12 9088 13.0 13.5 13.2 0.8 9116 chr2L 686913 intron ds - chr2L 691471 intron ds - chr2L 696029 intron ds - chr2L_12_690001 chr2L_690001 RAL-913 30 chr2L 721185 721188 chr2L 721448 721451 4 263 12.0 9.5 10.8 0.3 266 chr2L 721185 intergenic not near genes chr2L 721318 intergenic not near genes chr2L 721451 intergenic not near genes chr2L_4_720001 chr2L_720001 RAL-913 31 chr2L 763554 763620 chr2L 763680 763740 16 123 6.5 8.5 7.5 1.9 186 chr2L 763554 intergenic not near genes chr2L 763647 intergenic not near genes chr2L 763740 intergenic not near genes chr2L_16_760001 chr2L_760001 RAL-913 32 chr2L 770425 770431 chr2L 772256 772262 Bari1 6 1831 18.0 8.0 13.0 0.4 1837 chr2L 770425 intergenic not near genes chr2L 771344 intergenic not near genes chr2L 772262 intergenic CR44614 + chr2L_6_770001 chr2L_770001 RAL-913 33 chr2L 770437 770492 chr2L 772253 772278 Bari1 22 1820 7.5 7.5 7.5 2.6 1841 chr2L 770437 intergenic not near genes chr2L 771358 intergenic not near genes chr2L 772278 intergenic CR44614 + chr2L_22_770001 chr2L_770001 RAL-913 34 chr2L 781529 781538 chr2L 781919 781927 4 390 19.0 10.0 14.5 0.3 398 chr2L 781529 exon Gr21a + chr2L 781728 exon Gr21a + chr2L 781927 exon Gr21a + chr2L_4_780001 chr2L_780001 RAL-913 35 chr2L 781543 781600 chr2L 781918 781955 21 372 4.5 10.0 7.2 2.6 412 chr2L 781543 exon Gr21a + chr2L 781749 exon Gr21a + chr2L 781955 exon Gr21a + chr2L_21_780001 chr2L_780001 RAL-913 36 chr2L 849421 849484 chr2L 849562 849625 40 139 4.0 5.5 4.8 6.9 204 chr2L 849421 intron drongo - chr2L 849523 intron drongo - chr2L 849625 intron drongo - chr2L_40_845001 chr2L_845001 RAL-913 37 chr2L 866672 866730 chr2L 866800 866858 30 125 17.0 10.5 13.8 2.0 186 chr2L 866672 intron aru - chr2L 866765 intron aru - chr2L 866858 intron aru - chr2L_30_865001 chr2L_865001 RAL-913 38 chr2L 877807 877811 chr2L 877938 877942 5 131 16.0 10.0 13.0 0.4 135 chr2L 877807 3` UTR,exon CG15824 -,ninaA + chr2L 877874 3` UTR,intron CG15824 -,ninaA + chr2L 877942 3` UTR,intron CG15824 -,ninaA + chr2L_5_875001 chr2L_875001 RAL-913 39 chr2L 877827 877869 chr2L 877933 877987 9 126 7.0 8.5 7.8 1.0 160 chr2L 877827 3` UTR,exon CG15824 -,ninaA + chr2L 877907 3` UTR,intron CG15824 -,ninaA + chr2L 877987 3` UTR,exon CG15824 -,ninaA + chr2L_9_875001 chr2L_875001 RAL-913 40 chr2L 898331 898358 chr2L 898446 898477 10 118 12.0 6.0 9.0 1.0 146 chr2L 898331 intergenic Lsp1beta +,CR45348 - chr2L 898404 intergenic Lsp1beta +,CR45348 - chr2L 898477 intergenic Lsp1beta +,CR45348 - chr2L_10_895001 chr2L_895001 RAL-913 41 chr2L 898363 898391 chr2L 898443 898517 9 113 7.5 5.0 6.2 1.2 154 chr2L 898363 intergenic Lsp1beta +,CR45348 - chr2L 898440 intergenic Lsp1beta +,CR45348 - chr2L 898517 5` UTR Lsp1beta + chr2L_9_895001 chr2L_895001 RAL-913 42 chr2L 906500 906513 chr2L 906632 906645 6 132 6.5 12.0 9.2 0.6 145 chr2L 906500 intergenic not near genes chr2L 906572 intergenic not near genes chr2L 906645 intergenic not near genes chr2L_6_905001 chr2L_905001 RAL-913 43 chr2L 906514 906567 chr2L 906627 906699 17 127 0.0 11.0 5.5 2.6 185 chr2L 906514 intergenic not near genes chr2L 906606 intergenic not near genes chr2L 906699 intergenic not near genes chr2L_17_905001 chr2L_905001 RAL-913 44 chr2L 922415 922649 chr2L 922546 922782 64 126 5.0 6.5 5.8 9.4 367 chr2L 922415 intergenic CG4341 + chr2L 922598 intergenic CG4341 + chr2L 922782 intergenic CG4341 + chr2L_64_920001 chr2L_920001 RAL-913 45 chr2L 931590 931661 chr2L 931719 931790 13 129 6.0 9.5 7.8 1.5 200 chr2L 931590 intron CG4341 + chr2L 931690 intron CG4341 + chr2L 931790 intron CG4341 + chr2L_13_930001 chr2L_930001 RAL-913 46 chr2L 936494 936535 chr2L 936670 936713 13 176 14.0 0.0 7.0 1.6 219 chr2L 936494 intron CG4341 + chr2L 936604 intron CG4341 + chr2L 936713 intron CG4341 + chr2L_13_935001 chr2L_935001 RAL-913 47 chr2L 976836 976851 chr2L 984522 984537 roo 6 7686 15.0 8.0 11.5 0.5 7701 chr2L 976836 intergenic not near genes chr2L 980686 intergenic not near genes chr2L 984537 intergenic not near genes chr2L_6_980001 chr2L_980001 RAL-913 48 chr2L 976852 976908 chr2L 984521 984594 roo 13 7684 4.5 8.0 6.2 1.8 7742 chr2L 976852 intergenic not near genes chr2L 980723 intergenic not near genes chr2L 984594 intergenic not near genes chr2L_13_980001 chr2L_980001 RAL-913 49 chr2L 996676 996721 chr2L 1005821 1005866 roo 19 9145 4.0 10.5 7.2 2.3 9190 chr2L 996676 intergenic not near genes chr2L 1001271 intergenic not near genes chr2L 1005866 intergenic not near genes chr2L_19_1000001 chr2L_1000001 RAL-913 50 chr2L 1022970 1023036 chr2L 1023100 1023166 19 127 8.0 10.0 9.0 1.9 196 chr2L 1022970 intron IA-2 - chr2L 1023068 intron IA-2 - chr2L 1023166 intron IA-2 - chr2L_19_1020001 chr2L_1020001 RAL-913 51 chr2L 1025081 1025119 chr2L 1025205 1025249 20 127 7.0 5.5 6.2 2.8 168 chr2L 1025081 intron IA-2 - chr2L 1025165 intron IA-2 - chr2L 1025249 intron IA-2 - chr2L_20_1025001 chr2L_1025001 RAL-913 52 chr2L 1026146 1026229 chr2L 1026272 1026344 15 125 0.5 2.5 1.5 6.0 198 chr2L 1026146 intron,3` UTR IA-2 -,CG4375 - chr2L 1026245 intron,3` UTR IA-2 -,CG4375 - chr2L 1026344 intron,exon IA-2 -,CG4375 - chr2L_15_1025001 chr2L_1025001 RAL-913 53 chr2L 1035526 1035586 chr2L 1035638 1035712 31 124 9.5 8.0 8.8 3.2 186 chr2L 1035526 intron IA-2 - chr2L 1035619 intron IA-2 - chr2L 1035712 intron IA-2 - chr2L_31_1035001 chr2L_1035001 RAL-913 54 chr2L 1042576 1042581 chr2L 1042703 1042708 4 126 18.0 0.0 9.0 0.4 132 chr2L 1042576 intron IA-2 - chr2L 1042642 intron IA-2 - chr2L 1042708 intron IA-2 - chr2L_4_1040001 chr2L_1040001 RAL-913 55 chr2L 1044376 1044441 chr2L 1044548 1044606 32 170 5.5 6.0 5.8 4.7 230 chr2L 1044376 intron IA-2 - chr2L 1044491 intron IA-2 - chr2L 1044606 intron IA-2 - chr2L_32_1040001 chr2L_1040001 RAL-913 56 chr2L 1156815 1156893 chr2L 1156970 1157040 25 154 8.5 7.0 7.8 2.8 225 chr2L 1156815 intron capt - chr2L 1156928 intron capt - chr2L 1157040 intron capt - chr2L_25_1155001 chr2L_1155001 RAL-913 57 chr2L 1199858 1199864 chr2L 1200016 1200022 5 158 1.5 18.0 9.8 0.5 164 chr2L 1199858 3` UTR CG43348 + chr2L 1199940 intergenic CG43348 +,CG43349 + chr2L 1200022 intergenic CG43348 +,CG43349 + chr2L_5_1195001 chr2L_1195001 RAL-913 58 chr2L 1220085 1220157 chr2L 1227601 1227673 blood 27 7515 8.5 6.5 7.5 3.2 7588 chr2L 1220085 intron CG42329 + chr2L 1223879 intron CG42329 + chr2L 1227673 intron CG42329 + chr2L_27_1220001 chr2L_1220001 RAL-913 59 chr2L 1237936 1238002 chr2L 1238070 1238140 16 137 9.5 0.5 5.0 2.7 204 chr2L 1237936 intergenic not near genes chr2L 1238038 intergenic not near genes chr2L 1238140 intergenic not near genes chr2L_16_1235001 chr2L_1235001 RAL-913 60 chr2L 1244361 1244436 chr2L 1244488 1244553 29 124 7.0 5.5 6.2 4.0 192 chr2L 1244361 intergenic not near genes chr2L 1244457 intergenic not near genes chr2L 1244553 intergenic not near genes chr2L_29_1240001 chr2L_1240001 RAL-913 61 chr2L 1261078 1261255 chr2L 1261209 1261385 12 128 0.0 0.0 0.0 12.0 307 chr2L 1261078 intron robo3 + chr2L 1261232 intron robo3 + chr2L 1261385 intron robo3 + chr2L_12_1260001 chr2L_1260001 RAL-913 62 chr2L 1275274 1275342 chr2L 1275443 1275511 24 164 8.0 7.0 7.5 2.8 237 chr2L 1275274 intron robo3 + chr2L 1275392 intron robo3 + chr2L 1275511 intron robo3 + chr2L_24_1275001 chr2L_1275001 RAL-913 63 chr2L 1321979 1322049 chr2L 1322118 1322188 27 138 4.5 5.5 5.0 4.5 209 chr2L 1321979 intergenic not near genes chr2L 1322084 intergenic not near genes chr2L 1322188 intergenic not near genes chr2L_27_1320001 chr2L_1320001 RAL-913 64 chr2L 1370098 1370110 chr2L 1370228 1370240 5 130 20.5 11.5 16.0 0.3 142 chr2L 1370098 intergenic not near genes chr2L 1370169 intergenic not near genes chr2L 1370240 intergenic not near genes chr2L_5_1370001 chr2L_1370001 RAL-913 65 chr2L 1370111 1370157 chr2L 1370225 1370287 19 124 7.5 11.5 9.5 1.8 176 chr2L 1370111 intergenic not near genes chr2L 1370199 intergenic not near genes chr2L 1370287 intergenic not near genes chr2L_19_1370001 chr2L_1370001 RAL-913 66 chr2L 1436575 1436652 chr2L 1436711 1436788 33 134 5.5 4.5 5.0 5.5 213 chr2L 1436575 intergenic not near genes chr2L 1436682 intergenic not near genes chr2L 1436788 intergenic not near genes chr2L_33_1435001 chr2L_1435001 RAL-913 67 chr2L 1467367 1467416 chr2L 1467852 1467901 13 485 8.0 13.5 10.8 1.1 534 chr2L 1467367 intergenic not near genes chr2L 1467634 intergenic not near genes chr2L 1467901 intergenic not near genes chr2L_13_1465001 chr2L_1465001 RAL-913 68 chr2L 1504951 1504961 chr2L 1505101 1505111 5 150 8.0 27.5 17.8 0.3 160 chr2L 1504951 intergenic not near genes chr2L 1505031 intergenic not near genes chr2L 1505111 intergenic not near genes chr2L_5_1505001 chr2L_1505001 RAL-913 69 chr2L 1556435 1556491 chr2L 1556583 1556639 23 148 9.0 1.5 5.2 3.7 204 chr2L 1556435 intron haf + chr2L 1556537 intron haf + chr2L 1556639 intron haf + chr2L_23_1555001 chr2L_1555001 RAL-913 70 chr2L 1570646 1570714 chr2L 1573568 1573636 F-element 25 2922 5.0 9.0 7.0 3.1 2990 chr2L 1570646 intron haf + chr2L 1572141 intron haf + chr2L 1573636 intron haf + chr2L_25_1570001 chr2L_1570001 RAL-913 71 chr2L 1590907 1590981 chr2L 1591033 1591107 31 123 12.5 13.0 12.8 2.2 200 chr2L 1590907 intron haf + chr2L 1591007 intron haf + chr2L 1591107 intron haf + chr2L_31_1590001 chr2L_1590001 RAL-913 72 chr2L 1618216 1618236 chr2L 1618596 1618616 jockey 6 380 10.0 8.0 9.0 0.6 400 chr2L 1618216 intergenic CR44603 - chr2L 1618416 intergenic CR44603 - chr2L 1618616 intergenic CR44603 - chr2L_6_1615001 chr2L_1615001 RAL-913 73 chr2L 1634718 1634760 chr2L 1634853 1634895 13 132 14.5 15.0 14.8 0.8 177 chr2L 1634718 intergenic not near genes chr2L 1634806 intergenic not near genes chr2L 1634895 intergenic not near genes chr2L_13_1630001 chr2L_1630001 RAL-913 74 chr2L 1661976 1662033 chr2L 1662108 1662168 24 137 9.5 3.0 6.2 3.3 192 chr2L 1661976 intron chinmo + chr2L 1662072 intron chinmo + chr2L 1662168 intron chinmo + chr2L_24_1660001 chr2L_1660001 RAL-913 75 chr2L 1678914 1678998 chr2L 1686447 1686513 blood 15 7531 0.0 8.0 4.0 3.0 7599 chr2L 1678914 intron chinmo + chr2L 1682714 intron chinmo + chr2L 1686513 intron chinmo + chr2L_15_1680001 chr2L_1680001 RAL-913 76 chr2L 1711311 1711364 chr2L 1711685 1711736 mdg3 21 369 9.5 5.5 7.5 2.5 425 chr2L 1711311 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711524 3` UTR frtz - chr2L 1711736 3` UTR frtz - chr2L_21_1710001 chr2L_1710001 RAL-913 77 chr2L 1711365 1711380 chr2L 1711682 1711749 mdg3 8 363 7.5 4.5 6.0 1.1 384 chr2L 1711365 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711557 3` UTR frtz - chr2L 1711749 3` UTR frtz - chr2L_8_1710001 chr2L_1710001 RAL-913 78 chr2L 1852366 1852391 chr2L 1852492 1852518 5 127 9.5 2.5 6.0 0.7 152 chr2L 1852366 intron wry + chr2L 1852442 intron wry + chr2L 1852518 intron wry + chr2L_5_1850001 chr2L_1850001 RAL-913 79 chr2L 1883370 1883438 chr2L 1884003 1884068 22 632 6.5 5.5 6.0 3.1 698 chr2L 1883370 intron CG15358 - chr2L 1883719 intron CG15358 - chr2L 1884068 intergenic CG15358 - chr2L_22_1880001 chr2L_1880001 RAL-913 80 chr2L 1925437 1925500 chr2L 1925564 1925622 27 125 8.0 6.0 7.0 3.4 185 chr2L 1925437 intron CG7337 + chr2L 1925530 intron CG7337 + chr2L 1925622 intron CG7337 + chr2L_27_1925001 chr2L_1925001 RAL-913 81 chr2L 1950317 1950397 chr2L 1950451 1950532 11 132 4.5 3.5 4.0 2.2 215 chr2L 1950317 3` UTR erm - chr2L 1950424 3` UTR erm - chr2L 1950532 3` UTR erm - chr2L_11_1950001 chr2L_1950001 RAL-913 82 chr2L 1999509 1999582 chr2L 1999723 1999770 16 211 5.5 4.5 5.0 2.7 261 chr2L 1999509 intron CG33543 - chr2L 1999640 intron CG33543 - chr2L 1999770 intron CG33543 - chr2L_16_1995001 chr2L_1995001 RAL-913 83 chr2L 2007834 2007873 chr2L 2007992 2008031 16 158 4.5 17.5 11.0 1.3 197 chr2L 2007834 intergenic CR45712 + chr2L 2007932 intergenic CR45712 +,Nplp4 + chr2L 2008031 intergenic CR45712 +,Nplp4 + chr2L_16_2005001 chr2L_2005001 RAL-913 84 chr2L 2073308 2073339 chr2L 2073441 2073462 9 127 15.0 12.5 13.8 0.6 154 chr2L 2073308 intron dpr3 - chr2L 2073385 intron dpr3 - chr2L 2073462 intron dpr3 - chr2L_9_2070001 chr2L_2070001 RAL-913 85 chr2L 2100378 2100400 chr2L 2109550 2109551 roo 9 9178 9.5 13.0 11.2 0.7 9173 chr2L 2100378 intron dpr3 - chr2L 2104964 intron dpr3 - chr2L 2109551 intron dpr3 - chr2L_9_2100001 chr2L_2100001 RAL-913 86 chr2L 2112069 2112137 chr2L 2119775 2119849 opus 17 7707 7.0 8.5 7.8 1.9 7780 chr2L 2112069 intergenic not near genes chr2L 2115959 intergenic not near genes chr2L 2119849 intergenic not near genes chr2L_17_2115001 chr2L_2115001 RAL-913 87 chr2L 2250367 2250425 chr2L 2251184 2251218 22 813 14.5 0.5 7.5 2.6 851 chr2L 2250367 intergenic Ser12 - chr2L 2250792 exon Ser12 - chr2L 2251218 exon Ser12 - chr2L_22_2250001 chr2L_2250001 RAL-913 88 chr2L 2260785 2260821 chr2L 2260901 2260957 12 131 9.0 15.5 12.2 0.9 172 chr2L 2260785 intergenic not near genes chr2L 2260871 intergenic not near genes chr2L 2260957 intergenic not near genes chr2L_12_2260001 chr2L_2260001 RAL-913 89 chr2L 2262262 2262332 chr2L 2262389 2262459 17 126 7.5 2.0 4.8 2.9 197 chr2L 2262262 intergenic not near genes chr2L 2262360 intergenic not near genes chr2L 2262459 intergenic not near genes chr2L_17_2260001 chr2L_2260001 RAL-913 90 chr2L 2291022 2291086 chr2L 2291179 2291242 28 154 11.5 6.5 9.0 2.8 220 chr2L 2291022 intergenic robl22E - chr2L 2291132 intergenic robl22E - chr2L 2291242 intergenic not near genes chr2L_28_2290001 chr2L_2290001 RAL-913 91 chr2L 2294027 2294073 chr2L 2299246 2299323 copia 13 5237 5.0 5.5 5.2 2.1 5296 chr2L 2294027 intergenic not near genes chr2L 2296675 intergenic not near genes chr2L 2299323 intergenic not near genes chr2L_13_2295001 chr2L_2295001 RAL-913 92 chr2L 2317074 2317132 chr2L 2317295 2317353 18 220 45.5 54.0 49.8 0.4 279 chr2L 2317074 intron,intron CG9967 -,eys + chr2L 2317214 intron,intron CG9967 -,eys + chr2L 2317353 intron,intron CG9967 -,eys + chr2L_18_2315001 chr2L_2315001 RAL-913 93 chr2L 2333989 2334060 chr2L 2335098 2335107 23 1106 10.0 6.5 8.2 2.5 1118 chr2L 2333989 intron,intron CG9967 -,eys + chr2L 2334548 intron,intron CG9967 -,eys + chr2L 2335107 intron,intron CG9967 -,eys + chr2L_23_2330001 chr2L_2330001 RAL-913 94 chr2L 2372335 2372400 chr2L 2372471 2372530 21 135 0.5 10.0 5.2 3.4 195 chr2L 2372335 intergenic CG3609 - chr2L 2372432 intergenic CG3609 - chr2L 2372530 exon CG3609 - chr2L_21_2370001 chr2L_2370001 RAL-913 95 chr2L 2396247 2396289 chr2L 2396375 2396417 17 128 4.0 6.0 5.0 2.8 170 chr2L 2396247 intron VGlut + chr2L 2396332 intron VGlut + chr2L 2396417 intron VGlut + chr2L_17_2395001 chr2L_2395001 RAL-913 96 chr2L 2398934 2398940 chr2L 2399045 2399068 4 122 0.5 13.5 7.0 0.5 134 chr2L 2398934 intron VGlut + chr2L 2399001 intron VGlut + chr2L 2399068 intron VGlut + chr2L_4_2395001 chr2L_2395001 RAL-913 97 chr2L 2431394 2431400 chr2L 2431530 2431536 4 134 19.0 8.5 13.8 0.3 142 chr2L 2431394 intron dpp + chr2L 2431465 intron dpp + chr2L 2431536 intron dpp + chr2L_4_2430001 chr2L_2430001 RAL-913 98 chr2L 2431404 2431433 chr2L 2431522 2431543 6 125 12.5 7.0 9.8 0.6 139 chr2L 2431404 intron dpp + chr2L 2431474 intron dpp + chr2L 2431543 intron dpp + chr2L_6_2430001 chr2L_2430001 RAL-913 99 chr2L 2431439 2431467 chr2L 2431521 2431538 14 118 5.5 6.5 6.0 2.0 99 chr2L 2431439 intron dpp + chr2L 2431488 intron dpp + chr2L 2431538 intron dpp + chr2L_14_2430001 chr2L_2430001 RAL-913 100 chr2L 2497595 2497617 chr2L 2497721 2497743 11 126 10.5 12.0 11.2 0.9 148 chr2L 2497595 3` UTR oaf + chr2L 2497669 3` UTR oaf + chr2L 2497743 3` UTR oaf + chr2L_11_2495001 chr2L_2495001 RAL-913 101 chr2L 2503672 2503676 chr2L 2504501 2504505 4 829 12.0 8.5 10.2 0.4 833 chr2L 2503672 intergenic not near genes chr2L 2504088 intergenic not near genes chr2L 2504505 intergenic not near genes chr2L_4_2500001 chr2L_2500001 RAL-913 102 chr2L 2503686 2503741 chr2L 2504495 2504570 27 826 6.5 7.5 7.0 3.4 884 chr2L 2503686 intergenic not near genes chr2L 2504128 intergenic not near genes chr2L 2504570 intergenic not near genes chr2L_27_2500001 chr2L_2500001 RAL-913 103 chr2L 2547967 2548024 chr2L 2549125 2549194 27 1159 6.0 60.5 33.2 0.8 1227 chr2L 2547967 intergenic not near genes chr2L 2548580 intergenic not near genes chr2L 2549194 intergenic not near genes chr2L_27_2545001 chr2L_2545001 RAL-913 104 chr2L 2557812 2557831 chr2L 2557947 2557966 12 135 0.0 16.5 8.2 1.3 154 chr2L 2557812 intergenic not near genes chr2L 2557889 intergenic not near genes chr2L 2557966 intergenic not near genes chr2L_12_2555001 chr2L_2555001 RAL-913 105 chr2L 2557832 2557844 chr2L 2557933 2557979 10 127 0.0 12.0 6.0 1.4 147 chr2L 2557832 intergenic not near genes chr2L 2557906 intergenic not near genes chr2L 2557979 intergenic not near genes chr2L_10_2555001 chr2L_2555001 RAL-913 106 chr2L 2565498 2565560 chr2L 2571616 2571678 297 23 6118 13.0 16.0 14.5 1.5 6180 chr2L 2565498 exon Cyp309a2 - chr2L 2568588 intron Cyp309a2 - chr2L 2571678 exon Cyp309a2 - chr2L_23_2565001 chr2L_2565001 RAL-913 107 chr2L 2587768 2587784 chr2L 2587897 2587898 9 126 17.0 5.5 11.2 0.7 130 chr2L 2587768 intergenic not near genes chr2L 2587833 intergenic not near genes chr2L 2587898 intergenic not near genes chr2L_9_2585001 chr2L_2585001 RAL-913 108 chr2L 2587790 2587839 chr2L 2587893 2587968 25 123 8.5 6.0 7.2 3.0 178 chr2L 2587790 intergenic not near genes chr2L 2587879 intergenic not near genes chr2L 2587968 intergenic not near genes chr2L_25_2585001 chr2L_2585001 RAL-913 109 chr2L 2685094 2685165 chr2L 2685229 2685300 15 134 9.0 6.5 7.8 1.7 206 chr2L 2685094 intron CG31690 + chr2L 2685197 intron CG31690 + chr2L 2685300 intron CG31690 + chr2L_15_2685001 chr2L_2685001 RAL-913 110 chr2L 2698840 2698891 chr2L 2698974 2699028 17 136 0.0 6.0 3.0 4.2 188 chr2L 2698840 intron CG31690 + chr2L 2698934 intron CG31690 + chr2L 2699028 intron CG31690 + chr2L_17_2695001 chr2L_2695001 RAL-913 111 chr2L 2713474 2713538 chr2L 2713623 2713687 23 146 10.5 3.0 6.8 2.9 213 chr2L 2713474 intron CG31690 + chr2L 2713580 intron CG31690 + chr2L 2713687 intron CG31690 + chr2L_23_2710001 chr2L_2710001 RAL-913 112 chr2L 2756344 2756420 chr2L 2760139 2760214 20 3795 56.5 56.5 56.5 0.3 3870 chr2L 2756344 3` UTR Bacc + chr2L 2758279 intergenic CR44772 -,CG9960 -,Snapin -,Bacc + chr2L 2760214 intron Trn-SR + chr2L_20_2755001 chr2L_2755001 RAL-913 113 chr2L 2772576 2772594 chr2L 2779210 2779228 297 11 6634 14.0 17.5 15.8 0.7 6652 chr2L 2772576 3` UTR Syt1 - chr2L 2775902 intron Syt1 - chr2L 2779228 3` UTR Syt1 - chr2L_11_2775001 chr2L_2775001 RAL-913 114 chr2L 2772596 2772620 chr2L 2779201 2779254 297 11 6632 9.5 15.5 12.5 0.8 6658 chr2L 2772596 3` UTR Syt1 - chr2L 2775925 intron Syt1 - chr2L 2779254 3` UTR Syt1 - chr2L_11_2775001 chr2L_2775001 RAL-913 115 chr2L 2793899 2793970 chr2L 2794029 2794050 28 125 10.5 8.5 9.5 2.7 151 chr2L 2793899 5` UTR Syt1 - chr2L 2793974 intron Syt1 - chr2L 2794050 intron Syt1 - chr2L_28_2790001 chr2L_2790001 RAL-913 116 chr2L 2826487 2826576 chr2L 2826629 2826711 24 141 3.5 4.5 4.0 4.8 224 chr2L 2826487 intron Duox - chr2L 2826599 intron Duox - chr2L 2826711 intron Duox - chr2L_24_2825001 chr2L_2825001 RAL-913 117 chr2L 2895644 2895718 chr2L 2895780 2895862 31 135 9.5 3.5 6.5 4.1 218 chr2L 2895644 intron lilli + chr2L 2895753 intron lilli + chr2L 2895862 intron lilli + chr2L_31_2895001 chr2L_2895001 RAL-913 118 chr2L 2922278 2922343 chr2L 2922430 2922495 30 152 8.5 13.5 11.0 2.5 217 chr2L 2922278 intron lilli + chr2L 2922386 intron lilli + chr2L 2922495 intron lilli + chr2L_30_2920001 chr2L_2920001 RAL-913 119 chr2L 2932400 2932478 chr2L 2932907 2932985 29 506 6.5 6.5 6.5 3.9 585 chr2L 2932400 intron lilli + chr2L 2932692 intron lilli + chr2L 2932985 intron lilli + chr2L_29_2930001 chr2L_2930001 RAL-913 120 chr2L 2937376 2937447 chr2L 2937503 2937574 27 127 10.5 9.0 9.8 2.5 198 chr2L 2937376 intron lilli + chr2L 2937475 intron lilli + chr2L 2937574 intron lilli + chr2L_27_2935001 chr2L_2935001 RAL-913 121 chr2L 3072988 3073053 chr2L 3078241 3078306 copia 27 5252 13.0 7.5 10.2 2.4 5318 chr2L 3072988 intron toc - chr2L 3075647 intron toc - chr2L 3078306 intron toc - chr2L_27_3075001 chr2L_3075001 RAL-913 122 chr2L 3112430 3112495 chr2L 3112558 3112619 40 125 7.5 0.5 4.0 8.0 189 chr2L 3112430 intron toc - chr2L 3112524 intron toc - chr2L 3112619 intron toc - chr2L_40_3110001 chr2L_3110001 RAL-913 123 chr2L 3147248 3147302 chr2L 3147364 3147429 18 125 8.0 11.0 9.5 1.7 181 chr2L 3147248 3` UTR Mad - chr2L 3147338 3` UTR Mad - chr2L 3147429 exon Mad - chr2L_18_3145001 chr2L_3145001 RAL-913 124 chr2L 3159666 3159700 chr2L 3159792 3159826 9 126 5.5 7.0 6.2 1.2 160 chr2L 3159666 intergenic Mad -,gkt + chr2L 3159746 intergenic Mad -,gkt + chr2L 3159826 intergenic gkt +,Mad - chr2L_9_3155001 chr2L_3155001 RAL-913 125 chr2L 3185046 3185074 chr2L 3185172 3185200 11 126 6.5 0.0 3.2 2.6 154 chr2L 3185046 exon CG34393 - chr2L 3185123 intron CG34393 - chr2L 3185200 intron CG34393 - chr2L_11_3185001 chr2L_3185001 RAL-913 126 chr2L 3186426 3186494 chr2L 3186562 3186630 30 136 11.5 7.0 9.2 2.9 204 chr2L 3186426 intron CG34393 - chr2L 3186528 intron CG34393 - chr2L 3186630 intron CG34393 - chr2L_30_3185001 chr2L_3185001 RAL-913 127 chr2L 3234365 3234437 chr2L 3234598 3234670 30 232 9.5 5.0 7.2 3.7 305 chr2L 3234365 intergenic not near genes chr2L 3234518 intergenic not near genes chr2L 3234670 intergenic not near genes chr2L_30_3230001 chr2L_3230001 RAL-913 128 chr2L 3251467 3251515 chr2L 3259082 3259130 springer 16 7613 11.5 13.5 12.5 1.2 7663 chr2L 3251467 intergenic not near genes chr2L 3255298 intergenic not near genes chr2L 3259130 intergenic not near genes chr2L_16_3255001 chr2L_3255001 RAL-913 129 chr2L 3261465 3261505 chr2L 3261607 3261647 15 142 4.5 9.0 6.8 1.9 182 chr2L 3261465 intergenic CR45338 -,CR45337 - chr2L 3261556 intergenic CR45338 -,CR45337 - chr2L 3261647 3` UTR CR45338 - chr2L_15_3260001 chr2L_3260001 RAL-913 130 chr2L 3272941 3272965 chr2L 3273075 3273099 9 134 0.0 12.5 6.2 1.2 158 chr2L 3272941 intergenic not near genes chr2L 3273020 intergenic not near genes chr2L 3273099 intergenic not near genes chr2L_9_3270001 chr2L_3270001 RAL-913 131 chr2L 3291206 3291265 chr2L 3291336 3291395 30 128 7.5 12.0 9.8 2.8 189 chr2L 3291206 intergenic CG9664 - chr2L 3291300 3` UTR CG9664 - chr2L 3291395 3` UTR CG9664 - chr2L_30_3290001 chr2L_3290001 RAL-913 132 chr2L 3312094 3312114 chr2L 3312230 3312285 5 164 0.0 0.0 0.0 5.0 191 chr2L 3312094 intron CG3277 + chr2L 3312190 intron CG3277 + chr2L 3312285 intron CG3277 + chr2L_5_3310001 chr2L_3310001 RAL-913 133 chr2L 3386189 3386266 chr2L 3386347 3386424 38 156 4.5 7.5 6.0 5.4 235 chr2L 3386189 intergenic not near genes chr2L 3386306 intergenic not near genes chr2L 3386424 intergenic CR45301 - chr2L_38_3385001 chr2L_3385001 RAL-913 134 chr2L 3388558 3388618 chr2L 3388849 3388909 pogo 27 291 13.5 13.5 13.5 1.9 351 chr2L 3388558 intergenic CG42460 - chr2L 3388734 intergenic CG42460 - chr2L 3388909 intergenic CG42460 -,CR44791 + chr2L_27_3385001 chr2L_3385001 RAL-913 135 chr2L 3553497 3553561 chr2L 3553626 3553672 20 123 7.5 7.5 7.5 2.4 175 chr2L 3553497 intergenic not near genes chr2L 3553584 intergenic not near genes chr2L 3553672 intergenic not near genes chr2L_20_3550001 chr2L_3550001 RAL-913 136 chr2L 3634066 3634123 chr2L 3634196 3634255 35 132 9.0 13.5 11.2 2.9 189 chr2L 3634066 intron for - chr2L 3634160 intron for - chr2L 3634255 exon for - chr2L_35_3630001 chr2L_3630001 RAL-913 137 chr2L 3643422 3643447 chr2L 3643546 3643571 8 124 13.0 9.0 11.0 0.7 149 chr2L 3643422 intron for - chr2L 3643496 intron for - chr2L 3643571 intron for - chr2L_8_3640001 chr2L_3640001 RAL-913 138 chr2L 3649749 3649754 chr2L 3655002 3655007 copia 6 5253 29.0 13.5 21.2 0.3 5258 chr2L 3649749 intron for - chr2L 3652378 intron for - chr2L 3655007 intron for - chr2L_6_3650001 chr2L_3650001 RAL-913 139 chr2L 3649757 3649810 chr2L 3655000 3655057 copia 26 5252 10.5 12.5 11.5 2.1 5300 chr2L 3649757 intron for - chr2L 3652407 intron for - chr2L 3655057 intron for - chr2L_26_3650001 chr2L_3650001 RAL-913 140 chr2L 3667913 3667980 chr2L 3668129 3668196 26 215 4.5 5.0 4.8 4.5 283 chr2L 3667913 intron CG34340 + chr2L 3668054 intron,3` UTR CG34340 +,Sfp24Ba - chr2L 3668196 intron,exon CG34340 +,Sfp24Ba - chr2L_26_3665001 chr2L_3665001 RAL-913 141 chr2L 3685982 3686050 chr2L 3686120 3686188 21 138 1.0 6.0 3.5 4.7 206 chr2L 3685982 intron CG34340 + chr2L 3686085 intron CG34340 + chr2L 3686188 intron CG34340 + chr2L_21_3685001 chr2L_3685001 RAL-913 142 chr2L 3688282 3688317 chr2L 3688415 3688450 17 133 8.0 0.0 4.0 3.4 168 chr2L 3688282 intron CG34340 + chr2L 3688366 intron CG34340 + chr2L 3688450 intron CG34340 + chr2L_17_3685001 chr2L_3685001 RAL-913 143 chr2L 3787598 3787672 chr2L 3787737 3787801 13 130 7.5 1.5 4.5 2.4 203 chr2L 3787598 intron CG3921 + chr2L 3787700 intron CG3921 + chr2L 3787801 intron CG3921 + chr2L_13_3785001 chr2L_3785001 RAL-913 144 chr2L 3818982 3819041 chr2L 3819114 3819158 17 130 15.5 1.0 8.2 1.8 176 chr2L 3818982 intergenic CR44077 + chr2L 3819070 intergenic not near genes chr2L 3819158 intergenic not near genes chr2L_17_3815001 chr2L_3815001 RAL-913 145 chr2L 3883552 3883627 chr2L 3883755 3883830 30 201 6.5 11.0 8.8 3.1 278 chr2L 3883552 intron capu - chr2L 3883691 intron capu - chr2L 3883830 intron capu - chr2L_30_3880001 chr2L_3880001 RAL-913 146 chr2L 3893088 3893104 chr2L 3893222 3893238 6 134 6.0 11.5 8.8 0.6 150 chr2L 3893088 intron capu - chr2L 3893163 intron capu - chr2L 3893238 intron capu - chr2L_6_3890001 chr2L_3890001 RAL-913 147 chr2L 3936575 3936654 chr2L 3936705 3936784 21 130 7.5 4.0 5.8 3.1 209 chr2L 3936575 intron fred - chr2L 3936680 intron fred - chr2L 3936784 intron fred - chr2L_21_3935001 chr2L_3935001 RAL-913 148 chr2L 3960521 3960592 chr2L 3960741 3960812 42 219 8.5 7.0 7.8 4.8 291 chr2L 3960521 intron fred - chr2L 3960666 intron fred - chr2L 3960812 intron fred - chr2L_42_3960001 chr2L_3960001 RAL-913 149 chr2L 4037750 4037800 chr2L 4037887 4037937 28 137 9.0 9.0 9.0 2.8 187 chr2L 4037750 intron ed + chr2L 4037844 intron ed + chr2L 4037937 intron ed + chr2L_28_4035001 chr2L_4035001 RAL-913 150 chr2L 4062970 4063005 chr2L 4063113 4063144 4 140 9.5 11.5 10.5 0.3 174 chr2L 4062970 intron ed + chr2L 4063057 intron ed + chr2L 4063144 intron ed + chr2L_4_4060001 chr2L_4060001 RAL-913 151 chr2L 4066002 4066038 chr2L 4068877 4068897 Juan 12 2871 14.0 9.0 11.5 1.0 2895 chr2L 4066002 intron ed + chr2L 4067450 intron ed + chr2L 4068897 intron ed + chr2L_12_4065001 chr2L_4065001 RAL-913 152 chr2L 4072291 4072296 chr2L 4072428 4072433 4 137 15.5 0.0 7.8 0.5 142 chr2L 4072291 intron ed + chr2L 4072362 intron ed + chr2L 4072433 intron ed + chr2L_4_4070001 chr2L_4070001 RAL-913 153 chr2L 4078988 4079008 chr2L 4079116 4079130 7 127 5.5 16.5 11.0 0.6 142 chr2L 4078988 intron ed + chr2L 4079059 intron ed + chr2L 4079130 intron ed + chr2L_7_4075001 chr2L_4075001 RAL-913 154 chr2L 4081915 4081989 chr2L 4082044 4082116 42 128 5.0 4.5 4.8 7.2 201 chr2L 4081915 intron ed + chr2L 4082016 intron ed + chr2L 4082116 intron ed + chr2L_42_4080001 chr2L_4080001 RAL-913 155 chr2L 4125208 4125279 chr2L 4125363 4125434 33 155 0.0 9.5 4.8 5.7 226 chr2L 4125208 intergenic not near genes chr2L 4125321 intergenic not near genes chr2L 4125434 intergenic not near genes chr2L_33_4125001 chr2L_4125001 RAL-913 156 chr2L 4160463 4160527 chr2L 4160924 4160988 28 459 9.5 7.0 8.2 3.0 525 chr2L 4160463 intergenic not near genes chr2L 4160726 intergenic not near genes chr2L 4160988 intergenic not near genes chr2L_28_4160001 chr2L_4160001 RAL-913 157 chr2L 4181296 4181298 chr2L 4183978 4183980 Burdock 4 2682 8.0 20.0 14.0 0.3 2684 chr2L 4181296 intergenic not near genes chr2L 4182638 intergenic not near genes chr2L 4183980 intergenic not near genes chr2L_4_4180001 chr2L_4180001 RAL-913 158 chr2L 4184422 4184504 chr2L 4184791 4184873 32 367 6.0 5.5 5.8 4.7 451 chr2L 4184422 intergenic not near genes chr2L 4184648 intergenic not near genes chr2L 4184873 intergenic not near genes chr2L_32_4180001 chr2L_4180001 RAL-913 159 chr2L 4218246 4218296 chr2L 4218381 4218431 13 134 7.5 1.0 4.2 2.5 185 chr2L 4218246 intron ft - chr2L 4218338 intron ft - chr2L 4218431 intron ft - chr2L_13_4215001 chr2L_4215001 RAL-913 160 chr2L 4293953 4294015 chr2L 4294095 4294157 23 140 3.5 7.0 5.2 3.7 204 chr2L 4293953 intron tutl + chr2L 4294055 intron tutl + chr2L 4294157 intron tutl + chr2L_23_4290001 chr2L_4290001 RAL-913 161 chr2L 4298844 4298873 chr2L 4298980 4299030 16 151 10.5 8.0 9.2 1.6 186 chr2L 4298844 intron tutl + chr2L 4298937 intron tutl + chr2L 4299030 intron tutl + chr2L_16_4295001 chr2L_4295001 RAL-913 162 chr2L 4298876 4298896 chr2L 4298975 4299053 8 142 8.0 6.5 7.2 1.0 177 chr2L 4298876 intron tutl + chr2L 4298964 intron tutl + chr2L 4299053 intron tutl + chr2L_8_4295001 chr2L_4295001 RAL-913 163 chr2L 4316801 4316839 chr2L 4316923 4316962 20 124 13.5 19.5 16.5 1.1 161 chr2L 4316801 intron tutl + chr2L 4316882 intron tutl + chr2L 4316962 intron tutl + chr2L_20_4315001 chr2L_4315001 RAL-913 164 chr2L 4428450 4428525 chr2L 4428826 4428861 14 369 0.0 7.0 3.5 3.1 411 chr2L 4428450 intron CG15431 - chr2L 4428656 intron CG15431 - chr2L 4428861 intron CG15431 - chr2L_14_4425001 chr2L_4425001 RAL-913 165 chr2L 4431990 4432012 chr2L 4432104 4432147 5 131 7.5 9.0 8.2 0.5 157 chr2L 4431990 intron CG15431 - chr2L 4432068 intron CG15431 - chr2L 4432147 intron CG15431 - chr2L_5_4430001 chr2L_4430001 RAL-913 166 chr2L 4432015 4432028 chr2L 4432095 4432163 7 123 5.5 7.0 6.2 1.0 148 chr2L 4432015 intron CG15431 - chr2L 4432089 intron CG15431 - chr2L 4432163 intron CG15431 - chr2L_7_4430001 chr2L_4430001 RAL-913 167 chr2L 4600640 4600721 chr2L 4600773 4600854 32 128 5.0 4.5 4.8 5.5 214 chr2L 4600640 intron dp - chr2L 4600747 intron dp - chr2L 4600854 intron dp - chr2L_32_4600001 chr2L_4600001 RAL-913 168 chr2L 4601657 4601729 chr2L 4609148 4609220 mdg1 35 7491 10.0 6.0 8.0 3.9 7563 chr2L 4601657 intron dp - chr2L 4605438 intron dp - chr2L 4609220 intron dp - chr2L_35_4605001 chr2L_4605001 RAL-913 169 chr2L 4661798 4661854 chr2L 4669428 4669476 opus 29 7630 7.5 18.0 12.8 2.1 7678 chr2L 4661798 intergenic not near genes chr2L 4665637 intergenic not near genes chr2L 4669476 intergenic not near genes chr2L_29_4665001 chr2L_4665001 RAL-913 170 chr2L 4781996 4782056 chr2L 4782123 4782181 24 127 6.5 5.5 6.0 3.4 185 chr2L 4781996 intron CG15630 - chr2L 4782088 intron CG15630 - chr2L 4782181 intron CG15630 - chr2L_24_4780001 chr2L_4780001 RAL-913 171 chr2L 4793289 4793321 chr2L 4793634 4793666 15 345 6.5 8.5 7.5 1.8 377 chr2L 4793289 intron CG15630 - chr2L 4793478 intron CG15630 - chr2L 4793666 exon CG15630 - chr2L_15_4790001 chr2L_4790001 RAL-913 172 chr2L 4858414 4858485 chr2L 4858552 4858623 29 138 8.5 7.5 8.0 3.2 209 chr2L 4858414 intron pog + chr2L 4858518 intron pog + chr2L 4858623 intron pog + chr2L_29_4855001 chr2L_4855001 RAL-913 173 chr2L 4879105 4879154 chr2L 4880377 4880438 6 1282 26.0 35.0 30.5 0.2 1333 chr2L 4879105 exon Cf2 - chr2L 4879772 intron Cf2 - chr2L 4880438 exon Cf2 - chr2L_6_4875001 chr2L_4875001 RAL-913 174 chr2L 4880399 4880426 chr2L 4881226 4881266 10 836 28.5 31.5 30.0 0.3 867 chr2L 4880399 exon Cf2 - chr2L 4880832 intron Cf2 - chr2L 4881266 exon Cf2 - chr2L_10_4880001 chr2L_4880001 RAL-913 175 chr2L 4880443 4880447 chr2L 4881218 4881285 4 822 30.0 30.5 30.2 0.1 842 chr2L 4880443 exon Cf2 - chr2L 4880864 intron Cf2 - chr2L 4881285 exon Cf2 - chr2L_4_4880001 chr2L_4880001 RAL-913 176 chr2L 4918127 4918204 chr2L 4923250 4923365 jockey 14 5150 6.0 0.0 3.0 3.5 5238 chr2L 4918127 intron hoe1 - chr2L 4920746 intron hoe1 - chr2L 4923365 intron hoe1 - chr2L_14_4920001 chr2L_4920001 RAL-913 177 chr2L 4925623 4925696 chr2L 4925752 4925825 13 129 6.0 5.5 5.8 1.9 202 chr2L 4925623 intron hoe1 - chr2L 4925724 intron hoe1 - chr2L 4925825 intron hoe1 - chr2L_13_4925001 chr2L_4925001 RAL-913 178 chr2L 4931589 4931594 chr2L 4931897 4931902 4 308 28.5 10.0 19.2 0.2 313 chr2L 4931589 intron hoe1 - chr2L 4931746 intron hoe1 - chr2L 4931902 intron hoe1 - chr2L_4_4930001 chr2L_4930001 RAL-913 179 chr2L 4931597 4931650 chr2L 4931895 4931951 22 305 12.5 10.0 11.2 1.8 354 chr2L 4931597 intron hoe1 - chr2L 4931774 intron hoe1 - chr2L 4931951 exon hoe1 - chr2L_22_4930001 chr2L_4930001 RAL-913 180 chr2L 5040643 5040705 chr2L 5040789 5040851 39 145 11.5 9.0 10.2 3.5 208 chr2L 5040643 3` UTR,3` UTR CG14042 +,SP555 + chr2L 5040747 3` UTR,3` UTR,3` UTR CG14042 +,SP555 +,CG31650 - chr2L 5040851 3` UTR CG31650 - chr2L_39_5040001 chr2L_5040001 RAL-913 181 chr2L 5092364 5092439 chr2L 5092499 5092576 25 133 0.0 8.5 4.2 4.8 212 chr2L 5092364 intron pgant5 - chr2L 5092470 intron pgant5 - chr2L 5092576 intron pgant5 - chr2L_25_5090001 chr2L_5090001 RAL-913 182 chr2L 5120927 5121002 chr2L 5121071 5121139 23 142 7.0 5.0 6.0 3.3 212 chr2L 5120927 intron Msp300 + chr2L 5121033 intron Msp300 + chr2L 5121139 intron Msp300 + chr2L_23_5120001 chr2L_5120001 RAL-913 183 chr2L 5342729 5342789 chr2L 5345159 5345219 Doc 24 2428 13.0 11.5 12.2 1.8 2490 chr2L 5342729 intergenic CG12512 - chr2L 5343974 intergenic not near genes chr2L 5345219 intergenic not near genes chr2L_24_5340001 chr2L_5340001 RAL-913 184 chr2L 5378380 5378450 chr2L 5378509 5378579 35 129 8.0 8.5 8.2 3.8 199 chr2L 5378380 intergenic not near genes chr2L 5378480 intergenic not near genes chr2L 5378579 intergenic not near genes chr2L_35_5375001 chr2L_5375001 RAL-913 185 chr2L 5396361 5396375 chr2L 5396487 5396501 5 126 10.0 5.5 7.8 0.6 140 chr2L 5396361 intergenic not near genes chr2L 5396431 intergenic not near genes chr2L 5396501 intergenic not near genes chr2L_5_5395001 chr2L_5395001 RAL-913 186 chr2L 5401575 5401587 chr2L 5401701 5401713 9 126 17.5 0.0 8.8 0.9 138 chr2L 5401575 intergenic not near genes chr2L 5401644 intergenic not near genes chr2L 5401713 intergenic not near genes chr2L_9_5400001 chr2L_5400001 RAL-913 187 chr2L 5438518 5438560 chr2L 5438685 5438727 27 166 13.5 0.0 6.8 3.5 209 chr2L 5438518 intron CR31647 - chr2L 5438622 intron CR31647 - chr2L 5438727 intron CR31647 - chr2L_27_5435001 chr2L_5435001 RAL-913 188 chr2L 5475106 5475160 chr2L 5475261 5475309 20 155 5.0 6.5 5.8 2.9 203 chr2L 5475106 intergenic not near genes chr2L 5475208 intergenic not near genes chr2L 5475309 intergenic not near genes chr2L_20_5475001 chr2L_5475001 RAL-913 189 chr2L 5476167 5476228 chr2L 5476293 5476333 8 119 5.5 8.0 6.8 1.0 166 chr2L 5476167 intergenic not near genes chr2L 5476250 intergenic not near genes chr2L 5476333 intergenic not near genes chr2L_8_5475001 chr2L_5475001 RAL-913 190 chr2L 5487990 5488036 chr2L 5488120 5488166 10 129 8.5 0.5 4.5 1.8 176 chr2L 5487990 intergenic not near genes chr2L 5488078 intergenic not near genes chr2L 5488166 intergenic not near genes chr2L_10_5485001 chr2L_5485001 RAL-913 191 chr2L 5511288 5511347 chr2L 5511421 5511480 31 133 11.5 14.0 12.8 2.2 192 chr2L 5511288 intergenic not near genes chr2L 5511384 intergenic not near genes chr2L 5511480 intergenic not near genes chr2L_31_5510001 chr2L_5510001 RAL-913 192 chr2L 5563648 5563712 chr2L 5563782 5563846 20 134 0.0 14.0 7.0 2.5 198 chr2L 5563648 intergenic GluRIIB + chr2L 5563747 intergenic GluRIIB + chr2L 5563846 intergenic GluRIIB + chr2L_20_5560001 chr2L_5560001 RAL-913 193 chr2L 5592382 5592386 chr2L 5592512 5592516 4 130 0.0 16.5 8.2 0.4 134 chr2L 5592382 intergenic not near genes chr2L 5592449 intergenic not near genes chr2L 5592516 intergenic not near genes chr2L_4_5590001 chr2L_5590001 RAL-913 194 chr2L 5592390 5592397 chr2L 5592504 5592527 5 127 0.0 14.0 7.0 0.6 137 chr2L 5592390 intergenic not near genes chr2L 5592458 intergenic not near genes chr2L 5592527 intergenic not near genes chr2L_5_5590001 chr2L_5590001 RAL-913 195 chr2L 5628149 5628222 chr2L 5628284 5628356 14 133 0.0 8.5 4.2 2.7 207 chr2L 5628149 intron CG31646 - chr2L 5628252 intron CG31646 - chr2L 5628356 intron CG31646 - chr2L_14_5625001 chr2L_5625001 RAL-913 196 chr2L 5646661 5646678 chr2L 5646778 5646808 10 127 11.0 13.0 12.0 0.8 147 chr2L 5646661 intron CG31646 - chr2L 5646734 intron CG31646 - chr2L 5646808 intron CG31646 - chr2L_10_5645001 chr2L_5645001 RAL-913 197 chr2L 5666269 5666323 chr2L 5666409 5666463 18 140 6.0 16.0 11.0 1.5 194 chr2L 5666269 intron Hsp60C + chr2L 5666366 intron Hsp60C + chr2L 5666463 intron Hsp60C + chr2L_18_5665001 chr2L_5665001 RAL-913 198 chr2L 5695813 5695888 chr2L 5695955 5696030 38 142 8.0 8.5 8.2 4.1 217 chr2L 5695813 intergenic not near genes chr2L 5695922 intergenic not near genes chr2L 5696030 intergenic not near genes chr2L_38_5695001 chr2L_5695001 RAL-913 199 chr2L 5762404 5762467 chr2L 5762539 5762602 26 135 11.0 7.5 9.2 2.5 198 chr2L 5762404 3` UTR CG11030 + chr2L 5762503 intergenic obst-E -,CG11030 + chr2L 5762602 3` UTR obst-E - chr2L_26_5760001 chr2L_5760001 RAL-913 200 chr2L 5764869 5764910 chr2L 5765028 5765068 7 159 0.0 15.0 7.5 0.8 199 chr2L 5764869 intron obst-E - chr2L 5764968 intron obst-E - chr2L 5765068 intron obst-E - chr2L_7_5760001 chr2L_5760001 RAL-913 201 chr2L 5805164 5805252 chr2L 5805345 5805411 20 166 0.0 4.0 2.0 6.7 247 chr2L 5805164 intergenic CG11034 + chr2L 5805288 intergenic CG11034 + chr2L 5805411 5` UTR CG11034 + chr2L_20_5805001 chr2L_5805001 RAL-913 202 chr2L 5825025 5825104 chr2L 5825160 5825248 19 140 5.5 0.5 3.0 4.8 223 chr2L 5825025 5` UTR TrissinR + chr2L 5825136 5` UTR TrissinR + chr2L 5825248 5` UTR TrissinR + chr2L_19_5825001 chr2L_5825001 RAL-913 203 chr2L 5827671 5827693 chr2L 5836729 5836751 roo 7 9058 19.5 11.5 15.5 0.4 9080 chr2L 5827671 intron TrissinR + chr2L 5832211 intron TrissinR + chr2L 5836751 intron TrissinR + chr2L_7_5830001 chr2L_5830001 RAL-913 204 chr2L 5827696 5827738 chr2L 5836721 5836796 roo 23 9056 10.0 9.5 9.8 2.1 9100 chr2L 5827696 intron TrissinR + chr2L 5832246 intron TrissinR + chr2L 5836796 intron TrissinR + chr2L_23_5830001 chr2L_5830001 RAL-913 205 chr2L 5887556 5887628 chr2L 5887687 5887759 28 130 11.0 10.0 10.5 2.4 203 chr2L 5887556 3` UTR CR44577 - chr2L 5887658 3` UTR CR44577 - chr2L 5887759 3` UTR CR44577 - chr2L_28_5885001 chr2L_5885001 RAL-913 206 chr2L 5931266 5931313 chr2L 5931428 5931475 24 162 10.5 1.5 6.0 3.4 209 chr2L 5931266 intron dsf + chr2L 5931370 intron dsf + chr2L 5931475 intron dsf + chr2L_24_5930001 chr2L_5930001 RAL-913 207 chr2L 6007045 6007072 chr2L 6007171 6007198 13 125 16.0 4.5 10.2 1.2 153 chr2L 6007045 intergenic Gal -,CG9098 - chr2L 6007122 intergenic CG9098 -,Gal - chr2L 6007198 intergenic CG9098 -,Gal - chr2L_13_6005001 chr2L_6005001 RAL-913 208 chr2L 6068762 6068837 chr2L 6068911 6068986 30 149 8.5 6.5 7.5 3.5 224 chr2L 6068762 intergenic CG9150 -,CG13993 + chr2L 6068874 intergenic CG13993 +,CG9150 - chr2L 6068986 intergenic CG13993 +,CG9150 - chr2L_30_6065001 chr2L_6065001 RAL-913 209 chr2L 6075497 6075528 chr2L 6075614 6075655 12 125 9.5 14.5 12.0 0.9 158 chr2L 6075497 intergenic not near genes chr2L 6075576 intergenic not near genes chr2L 6075655 intergenic not near genes chr2L_12_6075001 chr2L_6075001 RAL-913 210 chr2L 6130719 6130774 chr2L 6130854 6130908 24 134 10.0 0.0 5.0 4.0 189 chr2L 6130719 intergenic CG42730 -,tectonic -,CG9222 + chr2L 6130814 intergenic CG42730 -,tectonic -,CG9222 + chr2L 6130908 intergenic CG9222 +,CG42730 -,tectonic - chr2L_24_6130001 chr2L_6130001 RAL-913 211 chr2L 6136502 6136582 chr2L 6136649 6136729 24 147 5.0 6.5 5.8 3.5 227 chr2L 6136502 intergenic not near genes chr2L 6136616 intergenic not near genes chr2L 6136729 intergenic not near genes chr2L_24_6135001 chr2L_6135001 RAL-913 212 chr2L 6227348 6227389 chr2L 6227479 6227520 12 129 9.0 13.0 11.0 1.0 172 chr2L 6227348 intergenic not near genes chr2L 6227434 intergenic not near genes chr2L 6227520 intergenic not near genes chr2L_12_6225001 chr2L_6225001 RAL-913 213 chr2L 6253571 6253633 chr2L 6253697 6253759 23 124 10.5 10.0 10.2 2.1 188 chr2L 6253571 intron Ddr + chr2L 6253665 intron Ddr + chr2L 6253759 intron Ddr + chr2L_23_6250001 chr2L_6250001 RAL-913 214 chr2L 6279591 6279631 chr2L 6279720 6279760 INE-1 14 128 21.0 3.5 12.2 1.1 169 chr2L 6279591 intron Ddr + chr2L 6279676 intron Ddr + chr2L 6279760 intron Ddr + chr2L_14_6275001 chr2L_6275001 RAL-913 215 chr2L 6283895 6283977 chr2L 6284056 6284139 21 161 7.5 0.0 3.8 4.4 244 chr2L 6283895 intron Ddr + chr2L 6284017 intron Ddr + chr2L 6284139 intron Ddr + chr2L_21_6280001 chr2L_6280001 RAL-913 216 chr2L 6349028 6349075 chr2L 6349156 6349203 28 128 7.5 6.0 6.8 3.6 175 chr2L 6349028 intergenic CG9498 - chr2L 6349116 intergenic CG9498 - chr2L 6349203 intergenic CG9498 - chr2L_28_6345001 chr2L_6345001 RAL-913 217 chr2L 6363106 6363138 chr2L 6366082 6366111 Burdock 18 2976 13.5 5.0 9.2 1.8 3005 chr2L 6363106 intergenic not near genes chr2L 6364608 intergenic not near genes chr2L 6366111 intergenic not near genes chr2L_18_6360001 chr2L_6360001 RAL-913 218 chr2L 6363145 6363179 chr2L 6366080 6366135 Burdock 12 2964 7.0 4.5 5.8 1.8 2990 chr2L 6363145 intergenic not near genes chr2L 6364640 intergenic not near genes chr2L 6366135 intergenic not near genes chr2L_12_6360001 chr2L_6360001 RAL-913 219 chr2L 6426815 6426882 chr2L 6445125 6445181 roo 30 18308 7.5 14.5 11.0 2.5 18366 chr2L 6426815 3` UTR CG9527 - chr2L 6435998 intron CG9527 - chr2L 6445181 exon CG9527 - chr2L_30_6435001 chr2L_6435001 RAL-913 220 chr2L 6544330 6544391 chr2L 6544463 6544533 14 132 0.0 4.0 2.0 4.7 203 chr2L 6544330 intron eya - chr2L 6544432 intron eya - chr2L 6544533 intron eya - chr2L_14_6540001 chr2L_6540001 RAL-913 221 chr2L 6598074 6598091 chr2L 6599080 6599098 9 1006 16.5 5.5 11.0 0.8 1024 chr2L 6598074 intron CG11319 - chr2L 6598586 intron CG11319 - chr2L 6599098 intron CG11319 - chr2L_9_6595001 chr2L_6595001 RAL-913 222 chr2L 6598095 6598147 chr2L 6599075 6599154 33 1005 8.0 5.0 6.5 4.4 1059 chr2L 6598095 intron CG11319 - chr2L 6598624 intron CG11319 - chr2L 6599154 intron CG11319 - chr2L_33_6595001 chr2L_6595001 RAL-913 223 chr2L 6620265 6620337 chr2L 6620404 6620425 32 134 7.0 11.0 9.0 3.2 160 chr2L 6620265 intron CG11320 - chr2L 6620345 intron CG11320 - chr2L 6620425 intron CG11320 - chr2L_32_6620001 chr2L_6620001 RAL-913 224 chr2L 6643776 6643845 chr2L 6643997 6644066 36 221 9.0 8.0 8.5 3.8 290 chr2L 6643776 intron CG31635 - chr2L 6643921 intron CG31635 - chr2L 6644066 intron CG31635 - chr2L_36_6640001 chr2L_6640001 RAL-913 225 chr2L 6724482 6724552 chr2L 6724615 6724685 22 133 5.0 0.0 2.5 6.3 203 chr2L 6724482 intron Liprin-alpha + chr2L 6724584 intron Liprin-alpha + chr2L 6724685 intron Liprin-alpha + chr2L_22_6720001 chr2L_6720001 RAL-913 226 chr2L 6740683 6740751 chr2L 6740820 6740886 8 137 0.0 9.0 4.5 1.5 203 chr2L 6740683 intergenic TTLL3A - chr2L 6740784 intergenic not near genes chr2L 6740886 intergenic not near genes chr2L_8_6740001 chr2L_6740001 RAL-913 227 chr2L 6771944 6772021 chr2L 6772075 6772107 19 113 9.5 8.5 9.0 1.9 163 chr2L 6771944 intron CG11321 - chr2L 6772026 intron CG11321 - chr2L 6772107 intron CG11321 - chr2L_19_6770001 chr2L_6770001 RAL-913 228 chr2L 6772550 6772563 chr2L 6772683 6772696 5 133 18.5 18.5 18.5 0.3 146 chr2L 6772550 intron CG11321 - chr2L 6772623 5` UTR CG11321 - chr2L 6772696 5` UTR CG11321 - chr2L_5_6770001 chr2L_6770001 RAL-913 229 chr2L 6772566 6772596 chr2L 6772682 6772729 7 122 12.0 18.5 15.2 0.4 163 chr2L 6772566 5` UTR CG11321 - chr2L 6772648 5` UTR CG11321 - chr2L 6772729 5` UTR CG11321 - chr2L_7_6770001 chr2L_6770001 RAL-913 230 chr2L 6795167 6795239 chr2L 6795295 6795356 27 130 8.5 12.0 10.2 2.4 189 chr2L 6795167 intron nrv2 - chr2L 6795262 intron nrv2 - chr2L 6795356 intron nrv2 - chr2L_27_6795001 chr2L_6795001 RAL-913 231 chr2L 6798947 6798950 chr2L 19299025 19299028 4 12500078 33.0 10.0 21.5 0.2 12500081 chr2L 6798947 intergenic nrv2 -,CR43610 + chr2L 13048988 intron CG9932 - chr2L 19299028 exon CG17564 - chr2L_4_13045001 chr2L_13045001 RAL-913 232 chr2L 6799494 6799560 chr2L 6799628 6799698 18 138 8.5 7.0 7.8 2.0 204 chr2L 6799494 5` UTR CR43610 + chr2L 6799596 5` UTR CR43610 + chr2L 6799698 intergenic CR43610 +,CG17376 - chr2L_18_6795001 chr2L_6795001 RAL-913 233 chr2L 6836456 6836467 chr2L 6836588 6836599 8 132 32.5 10.0 21.2 0.4 143 chr2L 6836456 intron sens-2 + chr2L 6836528 intron sens-2 + chr2L 6836599 intron sens-2 + chr2L_8_6835001 chr2L_6835001 RAL-913 234 chr2L 6836470 6836529 chr2L 6836585 6836661 31 131 7.5 9.5 8.5 3.3 191 chr2L 6836470 intron sens-2 + chr2L 6836566 intron sens-2 + chr2L 6836661 intron sens-2 + chr2L_31_6835001 chr2L_6835001 RAL-913 235 chr2L 6867750 6867769 chr2L 6867890 6867909 7 140 10.5 11.0 10.8 0.6 159 chr2L 6867750 intron Nha1 - chr2L 6867830 intron Nha1 - chr2L 6867909 intron Nha1 - chr2L_7_6865001 chr2L_6865001 RAL-913 236 chr2L 6876751 6876810 chr2L 6882977 6883001 diver 22 6226 12.0 10.0 11.0 1.8 6250 chr2L 6876751 intron Nlg2 + chr2L 6879876 intron Nlg2 + chr2L 6883001 intron Nlg2 + chr2L_22_6875001 chr2L_6875001 RAL-913 237 chr2L 6887448 6887529 chr2L 6887648 6887731 22 201 7.0 2.5 4.8 3.8 283 chr2L 6887448 intron Nlg2 + chr2L 6887590 intron Nlg2 + chr2L 6887731 intron Nlg2 + chr2L_22_6885001 chr2L_6885001 RAL-913 238 chr2L 6991393 6991430 chr2L 6998564 6998599 HMS-Beagle 8 7168 9.5 9.5 9.5 0.8 7206 chr2L 6991393 intron uif - chr2L 6994996 intron uif - chr2L 6998599 intron uif - chr2L_8_6990001 chr2L_6990001 RAL-913 239 chr2L 7088841 7088899 chr2L 7089092 7089147 8 250 0.0 2.0 1.0 4.0 306 chr2L 7088841 intergenic not near genes chr2L 7088994 intergenic not near genes chr2L 7089147 intergenic not near genes chr2L_8_7085001 chr2L_7085001 RAL-913 240 chr2L 7114973 7115025 chr2L 7115157 7115204 13 180 0.0 16.0 8.0 1.4 231 chr2L 7114973 intron Pvf3 - chr2L 7115088 intron Pvf3 - chr2L 7115204 intron Pvf3 - chr2L_13_7115001 chr2L_7115001 RAL-913 241 chr2L 7125751 7125808 chr2L 7125917 7125974 18 166 9.0 11.0 10.0 1.6 223 chr2L 7125751 intron Pvf3 - chr2L 7125862 intron Pvf3 - chr2L 7125974 intron Pvf3 - chr2L_18_7125001 chr2L_7125001 RAL-913 242 chr2L 7126820 7126849 chr2L 7126949 7126978 9 129 16.5 0.5 8.5 0.9 158 chr2L 7126820 intron Pvf3 - chr2L 7126899 intron Pvf3 - chr2L 7126978 intron Pvf3 - chr2L_9_7125001 chr2L_7125001 RAL-913 243 chr2L 7138036 7138116 chr2L 7138186 7138266 18 147 2.5 6.5 4.5 3.3 230 chr2L 7138036 intron Pvf3 - chr2L 7138151 intron Pvf3 - chr2L 7138266 intron Pvf3 - chr2L_18_7135001 chr2L_7135001 RAL-913 244 chr2L 7165757 7165807 chr2L 7165888 7165938 10 130 8.0 7.5 7.8 1.1 181 chr2L 7165757 intergenic not near genes chr2L 7165848 intergenic not near genes chr2L 7165938 intergenic not near genes chr2L_10_7165001 chr2L_7165001 RAL-913 245 chr2L 7167554 7167619 chr2L 7167682 7167747 28 127 7.5 11.5 9.5 2.7 193 chr2L 7167554 intergenic not near genes chr2L 7167650 intergenic not near genes chr2L 7167747 intergenic not near genes chr2L_28_7165001 chr2L_7165001 RAL-913 246 chr2L 7197949 7198021 chr2L 7198078 7198150 25 129 9.5 8.0 8.8 2.6 201 chr2L 7197949 intron CG4502 - chr2L 7198050 intron CG4502 - chr2L 7198150 intron CG4502 - chr2L_25_7195001 chr2L_7195001 RAL-913 247 chr2L 7215232 7215275 chr2L 7215364 7215372 9 128 10.5 5.0 7.8 1.0 140 chr2L 7215232 intron CG13784 - chr2L 7215302 intron CG13784 - chr2L 7215372 intron CG13784 - chr2L_9_7215001 chr2L_7215001 RAL-913 248 chr2L 7218353 7218428 chr2L 7218483 7218556 25 128 4.0 9.0 6.5 3.3 203 chr2L 7218353 intron CG13784 - chr2L 7218454 intron CG13784 - chr2L 7218556 intron CG13784 - chr2L_25_7215001 chr2L_7215001 RAL-913 249 chr2L 7246521 7246564 chr2L 7247430 7247473 13 909 1.5 6.5 4.0 2.6 952 chr2L 7246521 intron Ndae1 - chr2L 7246997 intron Ndae1 - chr2L 7247473 intron Ndae1 - chr2L_13_7245001 chr2L_7245001 RAL-913 250 chr2L 7268405 7268474 chr2L 7268535 7268604 20 130 0.0 4.0 2.0 6.7 199 chr2L 7268405 intron Wnt4 - chr2L 7268504 intron Wnt4 - chr2L 7268604 intron Wnt4 - chr2L_20_7265001 chr2L_7265001 RAL-913 251 chr2L 7295951 7296022 chr2L 7296139 7296212 19 190 10.5 10.0 10.2 1.7 261 chr2L 7295951 intergenic not near genes chr2L 7296082 intergenic not near genes chr2L 7296212 intergenic not near genes chr2L_19_7295001 chr2L_7295001 RAL-913 252 chr2L 7325882 7325945 chr2L 7326001 7326034 12 125 3.0 2.5 2.8 3.2 152 chr2L 7325882 intergenic not near genes chr2L 7325958 intergenic not near genes chr2L 7326034 intergenic not near genes chr2L_12_7325001 chr2L_7325001 RAL-913 253 chr2L 7343283 7343356 chr2L 7350449 7350487 roo 31 7162 6.5 11.0 8.8 3.2 7204 chr2L 7343283 intron Wnt6 + chr2L 7346885 intron Wnt6 + chr2L 7350487 intron Wnt6 + chr2L_31_7345001 chr2L_7345001 RAL-913 254 chr2L 7436148 7436221 chr2L 7436292 7436380 18 150 7.0 0.0 3.5 4.0 232 chr2L 7436148 intergenic not near genes chr2L 7436264 intergenic not near genes chr2L 7436380 intergenic not near genes chr2L_18_7435001 chr2L_7435001 RAL-913 255 chr2L 7460998 7461076 chr2L 7461303 7461356 40 304 12.5 6.5 9.5 3.8 358 chr2L 7460998 intron Gr28b - chr2L 7461177 intron Gr28b - chr2L 7461356 intron Gr28b - chr2L_40_7460001 chr2L_7460001 RAL-913 256 chr2L 7493357 7493421 chr2L 7493498 7493557 14 138 0.0 10.0 5.0 2.3 200 chr2L 7493357 intron Ziz - chr2L 7493457 intron Ziz - chr2L 7493557 intron Ziz - chr2L_14_7490001 chr2L_7490001 RAL-913 257 chr2L 7493631 7493696 chr2L 7493892 7493921 24 259 9.0 2.0 5.5 3.7 290 chr2L 7493631 intron Ziz - chr2L 7493776 intron Ziz - chr2L 7493921 intron Ziz - chr2L_24_7490001 chr2L_7490001 RAL-913 258 chr2L 7548074 7548091 chr2L 7550556 7550582 Burdock 7 2490 10.0 19.0 14.5 0.5 2508 chr2L 7548074 intron RapGAP1 - chr2L 7549328 intron RapGAP1 - chr2L 7550582 intron RapGAP1 - chr2L_7_7545001 chr2L_7545001 RAL-913 259 chr2L 7555695 7555753 chr2L 7555829 7555887 26 132 8.5 11.5 10.0 2.4 192 chr2L 7555695 intron RapGAP1 - chr2L 7555791 intron RapGAP1 - chr2L 7555887 intron RapGAP1 - chr2L_26_7555001 chr2L_7555001 RAL-913 260 chr2L 7567477 7567530 chr2L 7567620 7567674 9 143 8.5 10.5 9.5 0.9 197 chr2L 7567477 intron RapGAP1 - chr2L 7567576 intron RapGAP1 - chr2L 7567674 intron RapGAP1 - chr2L_9_7565001 chr2L_7565001 RAL-913 261 chr2L 7567533 7567534 chr2L 7567606 7567663 4 122 8.5 7.5 8.0 0.4 130 chr2L 7567533 intron RapGAP1 - chr2L 7567598 intron RapGAP1 - chr2L 7567663 intron RapGAP1 - chr2L_4_7565001 chr2L_7565001 RAL-913 262 chr2L 7573894 7573929 chr2L 7574021 7574047 8 122 5.5 17.5 11.5 0.6 153 chr2L 7573894 intron RapGAP1 - chr2L 7573970 intron RapGAP1 - chr2L 7574047 intron RapGAP1 - chr2L_8_7570001 chr2L_7570001 RAL-913 263 chr2L 7579148 7579227 chr2L 7579389 7579457 BS 19 238 0.5 0.0 0.2 15.8 309 chr2L 7579148 intergenic RapGAP1 - chr2L 7579302 intergenic RapGAP1 - chr2L 7579457 intergenic RapGAP1 - chr2L_19_7575001 chr2L_7575001 RAL-913 264 chr2L 7676246 7676255 chr2L 7676578 7676587 6 332 14.0 0.0 7.0 0.8 341 chr2L 7676246 intron Myo28B1 + chr2L 7676416 intron Myo28B1 + chr2L 7676587 intron Myo28B1 + chr2L_6_7675001 chr2L_7675001 RAL-913 265 chr2L 7742493 7742566 chr2L 7742623 7742674 25 128 9.0 9.5 9.2 2.5 181 chr2L 7742493 intergenic not near genes chr2L 7742584 intergenic not near genes chr2L 7742674 intergenic not near genes chr2L_25_7740001 chr2L_7740001 RAL-913 266 chr2L 7765764 7765841 chr2L 7765908 7765976 18 140 5.5 0.0 2.8 4.7 212 chr2L 7765764 3` UTR CG7196 + chr2L 7765870 3` UTR CG7196 + chr2L 7765976 intergenic CG7196 + chr2L_18_7765001 chr2L_7765001 RAL-913 267 chr2L 7768798 7768869 chr2L 7768924 7768995 12 125 0.0 10.0 5.0 2.0 197 chr2L 7768798 intron CG7191 + chr2L 7768896 intron CG7191 + chr2L 7768995 intron CG7191 + chr2L_12_7765001 chr2L_7765001 RAL-913 268 chr2L 7770562 7770588 chr2L 7770733 7770759 10 171 8.0 10.0 9.0 1.0 197 chr2L 7770562 intron CG7191 + chr2L 7770660 intron CG7191 + chr2L 7770759 intron CG7191 + chr2L_10_7770001 chr2L_7770001 RAL-913 269 chr2L 7778855 7778863 chr2L 7779017 7779028 8 164 9.0 0.0 4.5 1.5 173 chr2L 7778855 intergenic not near genes chr2L 7778942 intergenic not near genes chr2L 7779028 intergenic not near genes chr2L_8_7775001 chr2L_7775001 RAL-913 270 chr2L 7887656 7887676 chr2L 7887788 7887808 10 131 5.5 16.0 10.8 0.8 152 chr2L 7887656 intergenic Spn28Da -,CG7102 - chr2L 7887732 3` UTR Spn28Da - chr2L 7887808 exon Spn28Da - chr2L_10_7885001 chr2L_7885001 RAL-913 271 chr2L 7958998 7959070 chr2L 7960459 7960533 pogo 27 1460 7.5 7.5 7.5 3.2 1535 chr2L 7958998 intron Snoo - chr2L 7959766 intron Snoo - chr2L 7960533 intron Snoo - chr2L_27_7955001 chr2L_7955001 RAL-913 272 chr2L 7977042 7977113 chr2L 7984068 7984104 297 26 7022 6.0 10.5 8.2 2.8 7062 chr2L 7977042 intron Snoo - chr2L 7980573 intron Snoo - chr2L 7984104 intron,5` UTR Snoo -,CG7231 + chr2L_26_7980001 chr2L_7980001 RAL-913 273 chr2L 7986879 7986916 chr2L 7987015 7987053 9 137 11.0 22.0 16.5 0.5 174 chr2L 7986879 3` UTR pes - chr2L 7986966 3` UTR pes - chr2L 7987053 3` UTR pes - chr2L_9_7985001 chr2L_7985001 RAL-913 274 chr2L 8002990 8003054 chr2L 8003122 8003185 16 132 8.5 11.0 9.8 1.5 195 chr2L 8002990 intron Wwox - chr2L 8003088 intron Wwox - chr2L 8003185 intron Wwox - chr2L_16_8000001 chr2L_8000001 RAL-913 275 chr2L 8013578 8013583 chr2L 8018832 8018837 copia 4 5254 22.0 0.0 11.0 0.3 5259 chr2L 8013578 intron Tg + chr2L 8016208 intron Tg + chr2L 8018837 intron Tg + chr2L_4_8015001 chr2L_8015001 RAL-913 276 chr2L 8013621 8013642 chr2L 8023606 8023627 copia 10 9985 9.0 12.0 10.5 0.9 10006 chr2L 8013621 intron Tg + chr2L 8018624 intron Tg + chr2L 8023627 intron Tg + chr2L_10_8015001 chr2L_8015001 RAL-913 277 chr2L 8018815 8018826 chr2L 8023649 8023660 Doc 7 4833 0.0 22.0 11.0 0.6 4845 chr2L 8018815 intron Tg + chr2L 8021238 intron Tg + chr2L 8023660 intron Tg + chr2L_7_8020001 chr2L_8020001 RAL-913 278 chr2L 8032981 8033051 chr2L 8033125 8033135 20 138 6.0 8.5 7.2 2.4 154 chr2L 8032981 intron,intron CG7367 -,Cka + chr2L 8033058 intron,intron CG7367 -,Cka + chr2L 8033135 intron,intron CG7367 -,Cka + chr2L_20_8030001 chr2L_8030001 RAL-913 279 chr2L 8044051 8044077 chr2L 8044180 8044206 10 127 16.5 7.5 12.0 0.8 155 chr2L 8044051 exon CG7466 + chr2L 8044128 intron CG7466 + chr2L 8044206 intron CG7466 + chr2L_10_8040001 chr2L_8040001 RAL-913 280 chr2L 8044079 8044125 chr2L 8044176 8044247 24 127 8.5 8.0 8.2 2.6 168 chr2L 8044079 intron CG7466 + chr2L 8044163 intron CG7466 + chr2L 8044247 intron CG7466 + chr2L_24_8040001 chr2L_8040001 RAL-913 281 chr2L 8167109 8167171 chr2L 8167250 8167292 31 136 10.5 10.0 10.2 2.8 183 chr2L 8167109 intron Piezo + chr2L 8167200 intron Piezo + chr2L 8167292 intron Piezo + chr2L_31_8165001 chr2L_8165001 RAL-913 282 chr2L 8171277 8171299 chr2L 8171408 8171430 10 131 1.0 19.5 10.2 0.9 153 chr2L 8171277 intron Piezo + chr2L 8171354 intron Piezo + chr2L 8171430 intron Piezo + chr2L_10_8170001 chr2L_8170001 RAL-913 283 chr2L 8185443 8185516 chr2L 8185580 8185655 6 138 0.0 11.0 5.5 0.9 212 chr2L 8185443 intron Piezo + chr2L 8185549 intron Piezo + chr2L 8185655 intron Piezo + chr2L_6_8185001 chr2L_8185001 RAL-913 284 chr2L 8231921 8232022 chr2L 8232079 8232150 27 155 0.5 4.5 2.5 7.7 229 chr2L 8231921 intron Pvr - chr2L 8232036 intron Pvr - chr2L 8232150 intron Pvr - chr2L_27_8230001 chr2L_8230001 RAL-913 285 chr2L 8244682 8244749 chr2L 8244854 8244921 32 170 4.0 6.5 5.2 5.2 239 chr2L 8244682 intron CG8086 - chr2L 8244802 intron CG8086 - chr2L 8244921 intron CG8086 - chr2L_32_8240001 chr2L_8240001 RAL-913 286 chr2L 8286252 8286286 chr2L 8286389 8286423 7 132 15.5 7.5 11.5 0.6 171 chr2L 8286252 intron Btk29A - chr2L 8286338 intron Btk29A - chr2L 8286423 intron Btk29A - chr2L_7_8285001 chr2L_8285001 RAL-913 287 chr2L 8286291 8286323 chr2L 8286388 8286460 22 132 9.5 7.0 8.2 2.4 169 chr2L 8286291 intron Btk29A - chr2L 8286376 intron Btk29A - chr2L 8286460 intron Btk29A - chr2L_22_8285001 chr2L_8285001 RAL-913 288 chr2L 8336894 8336943 chr2L 8337023 8337072 10 128 0.0 6.5 3.2 2.4 178 chr2L 8336894 intergenic not near genes chr2L 8336983 intergenic not near genes chr2L 8337072 intergenic not near genes chr2L_10_8335001 chr2L_8335001 RAL-913 289 chr2L 8351508 8351586 chr2L 8351635 8351713 13 127 0.5 7.0 3.8 2.7 205 chr2L 8351508 intergenic CG7778 + chr2L 8351610 intergenic CG7778 + chr2L 8351713 intergenic Mur29B + chr2L_13_8350001 chr2L_8350001 RAL-913 290 chr2L 8389801 8389803 chr2L 8389927 8389929 4 126 6.0 14.5 10.2 0.4 128 chr2L 8389801 5` UTR snRNA:U6atac:29B + chr2L 8389865 intergenic CG42820 -,snRNA:U6atac:29B + chr2L 8389929 3` UTR CG42820 - chr2L_4_8385001 chr2L_8385001 RAL-913 291 chr2L 8389804 8389808 chr2L 8389924 8389934 6 123 4.5 14.0 9.2 0.6 130 chr2L 8389804 5` UTR snRNA:U6atac:29B + chr2L 8389869 intergenic CG42820 -,snRNA:U6atac:29B + chr2L 8389934 3` UTR CG42820 - chr2L_6_8385001 chr2L_8385001 RAL-913 292 chr2L 8451795 8451860 chr2L 8451960 8452025 17 161 8.0 8.0 8.0 1.9 230 chr2L 8451795 5` UTR fu12 - chr2L 8451910 intron fu12 - chr2L 8452025 intron fu12 - chr2L_17_8450001 chr2L_8450001 RAL-913 293 chr2L 8452379 8452440 chr2L 8461600 8461661 roo 20 9221 9.5 11.0 10.2 1.8 9282 chr2L 8452379 intron fu12 - chr2L 8457020 intron fu12 - chr2L 8461661 intron fu12 - chr2L_20_8455001 chr2L_8455001 RAL-913 294 chr2L 8508971 8509005 chr2L 8509123 8509157 12 152 0.0 2.0 1.0 6.0 186 chr2L 8508971 intergenic CG13096 - chr2L 8509064 intergenic CG13096 - chr2L 8509157 3` UTR CG13096 - chr2L_12_8505001 chr2L_8505001 RAL-913 295 chr2L 8538120 8538123 chr2L 8538246 8538249 4 126 16.5 0.5 8.5 0.4 129 chr2L 8538120 intron CG17834 + chr2L 8538184 intron CG17834 + chr2L 8538249 intron CG17834 + chr2L_4_8535001 chr2L_8535001 RAL-913 296 chr2L 8538126 8538194 chr2L 8538242 8538330 11 130 5.0 2.0 3.5 2.4 204 chr2L 8538126 intron CG17834 + chr2L 8538228 intron CG17834 + chr2L 8538330 intron CG17834 + chr2L_11_8535001 chr2L_8535001 RAL-913 297 chr2L 8594425 8594488 chr2L 8601528 8601592 297 20 7103 10.0 12.0 11.0 1.7 7167 chr2L 8594425 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598008 intron Sema-1a + chr2L 8601592 intron Sema-1a + chr2L_20_8595001 chr2L_8595001 RAL-913 298 chr2L 8612806 8612869 chr2L 8612933 8612996 23 126 10.5 12.5 11.5 1.8 190 chr2L 8612806 intron Sema-1a + chr2L 8612901 intron Sema-1a + chr2L 8612996 intron Sema-1a + chr2L_23_8610001 chr2L_8610001 RAL-913 299 chr2L 8616598 8616641 chr2L 8616798 8616841 18 200 12.5 0.0 6.2 2.5 243 chr2L 8616598 intron Sema-1a + chr2L 8616720 intron Sema-1a + chr2L 8616841 intron Sema-1a + chr2L_18_8615001 chr2L_8615001 RAL-913 300 chr2L 8680081 8680091 chr2L 8680217 8680227 4 136 0.0 8.5 4.2 0.8 146 chr2L 8680081 intergenic CG9287 - chr2L 8680154 intergenic CG9287 - chr2L 8680227 intergenic CG9287 - chr2L_4_8680001 chr2L_8680001 RAL-913 301 chr2L 8698284 8698329 chr2L 8698468 8698503 15 188 12.5 0.0 6.2 2.1 219 chr2L 8698284 intron Hnf4 - chr2L 8698394 intron Hnf4 - chr2L 8698503 intron Hnf4 - chr2L_15_8695001 chr2L_8695001 RAL-913 302 chr2L 8723071 8723137 chr2L 8731498 8731564 Tirant 30 8426 8.5 5.5 7.0 3.8 8493 chr2L 8723071 intron raw - chr2L 8727318 intron raw - chr2L 8731564 intron raw - chr2L_30_8725001 chr2L_8725001 RAL-913 303 chr2L 8746134 8746191 chr2L 8746268 8746284 25 131 6.0 8.0 7.0 3.1 150 chr2L 8746134 intergenic not near genes chr2L 8746209 intergenic not near genes chr2L 8746284 intergenic not near genes chr2L_25_8745001 chr2L_8745001 RAL-913 304 chr2L 8751441 8751521 chr2L 8751579 8751656 28 136 2.5 1.5 2.0 9.3 215 chr2L 8751441 intergenic CG45307 - chr2L 8751548 intergenic CG45307 - chr2L 8751656 intergenic CG45307 - chr2L_28_8750001 chr2L_8750001 RAL-913 305 chr2L 8784659 8784723 chr2L 8784820 8784884 29 161 8.0 8.5 8.2 3.2 225 chr2L 8784659 intergenic not near genes chr2L 8784772 intergenic not near genes chr2L 8784884 intergenic not near genes chr2L_29_8780001 chr2L_8780001 RAL-913 306 chr2L 8789304 8789328 chr2L 8789386 8789451 12 111 8.0 10.0 9.0 1.2 147 chr2L 8789304 intergenic not near genes chr2L 8789378 intergenic not near genes chr2L 8789451 intergenic not near genes chr2L_12_8785001 chr2L_8785001 RAL-913 307 chr2L 8791274 8791305 chr2L 8791401 8791432 8 127 15.0 8.5 11.8 0.6 158 chr2L 8791274 intergenic not near genes chr2L 8791353 intergenic not near genes chr2L 8791432 intergenic not near genes chr2L_8_8790001 chr2L_8790001 RAL-913 308 chr2L 8799760 8799826 chr2L 8799925 8799992 39 164 9.0 10.0 9.5 3.7 232 chr2L 8799760 intergenic not near genes chr2L 8799876 intergenic not near genes chr2L 8799992 intergenic not near genes chr2L_39_8795001 chr2L_8795001 RAL-913 309 chr2L 8813841 8813857 chr2L 8813948 8813984 4 121 4.0 12.0 8.0 0.4 143 chr2L 8813841 intergenic not near genes chr2L 8813912 intergenic not near genes chr2L 8813984 intergenic not near genes chr2L_4_8810001 chr2L_8810001 RAL-913 310 chr2L 8815858 8815891 chr2L 8815998 8816031 10 140 8.5 7.0 7.8 1.1 173 chr2L 8815858 intergenic not near genes chr2L 8815944 intergenic not near genes chr2L 8816031 intergenic not near genes chr2L_10_8815001 chr2L_8815001 RAL-913 311 chr2L 8820879 8820949 chr2L 8821008 8821079 31 129 11.5 8.0 9.8 2.9 200 chr2L 8820879 intergenic not near genes chr2L 8820979 intergenic not near genes chr2L 8821079 intergenic not near genes chr2L_31_8820001 chr2L_8820001 RAL-913 312 chr2L 8852594 8852639 chr2L 8852728 8852735 7 128 11.5 9.5 10.5 0.6 141 chr2L 8852594 3` UTR CR45365 - chr2L 8852664 3` UTR CR45365 - chr2L 8852735 intergenic CR45365 - chr2L_7_8850001 chr2L_8850001 RAL-913 313 chr2L 8963357 8963368 chr2L 8965672 8965683 4 2315 13.0 47.5 30.2 0.1 2326 chr2L 8963357 exon CG32985 + chr2L 8964520 exon CG32985 + chr2L 8965683 exon CG32984 + chr2L_4_8960001 chr2L_8960001 RAL-913 314 chr2L 8976197 8976252 chr2L 8976339 8976394 12 142 0.0 10.5 5.2 1.9 197 chr2L 8976197 intergenic not near genes chr2L 8976296 intergenic not near genes chr2L 8976394 intergenic not near genes chr2L_12_8975001 chr2L_8975001 RAL-913 315 chr2L 8977924 8977998 chr2L 8978063 8978137 26 138 3.0 10.5 6.8 3.3 213 chr2L 8977924 3` UTR CG13101 - chr2L 8978030 3` UTR CG13101 - chr2L 8978137 exon CG13101 - chr2L_26_8975001 chr2L_8975001 RAL-913 316 chr2L 8980415 8980479 chr2L 8980554 8980618 14 139 13.5 0.0 6.8 1.8 203 chr2L 8980415 intron CG13101 - chr2L 8980516 intron CG13101 - chr2L 8980618 intron CG13101 - chr2L_14_8980001 chr2L_8980001 RAL-913 317 chr2L 8992263 8992326 chr2L 8992397 8992460 32 133 9.0 14.5 11.8 2.5 197 chr2L 8992263 exon CG9555 + chr2L 8992362 exon CG9555 + chr2L 8992460 intron CG9555 + chr2L_32_8990001 chr2L_8990001 RAL-913 318 chr2L 9000241 9000307 chr2L 9007801 9007804 roo 20 7557 11.5 8.5 10.0 1.8 7563 chr2L 9000241 intergenic Try29F + chr2L 9004022 intergenic not near genes chr2L 9007804 intergenic not near genes chr2L_20_9000001 chr2L_9000001 RAL-913 319 chr2L 9042515 9042585 chr2L 9042672 9042729 12 155 0.0 7.5 3.8 2.5 214 chr2L 9042515 intergenic not near genes chr2L 9042622 intergenic not near genes chr2L 9042729 intergenic not near genes chr2L_12_9040001 chr2L_9040001 RAL-913 320 chr2L 9068129 9068181 chr2L 9068256 9068308 23 126 15.0 11.5 13.2 1.6 179 chr2L 9068129 intron CG31708 - chr2L 9068218 intron CG31708 - chr2L 9068308 intron CG31708 - chr2L_23_9065001 chr2L_9065001 RAL-913 321 chr2L 9084336 9084340 chr2L 16217660 16217660 10 7133321 38.0 44.0 41.0 0.2 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_10_12650001 chr2L_12650001 RAL-913 322 chr2L 9085903 9085916 chr2L 9086034 9086047 7 131 0.0 15.5 7.8 0.8 144 chr2L 9085903 intron Toll-4 + chr2L 9085975 intron Toll-4 + chr2L 9086047 intron Toll-4 + chr2L_7_9085001 chr2L_9085001 RAL-913 323 chr2L 9095523 9095595 chr2L 9095660 9095732 31 135 6.5 7.0 6.8 4.0 209 chr2L 9095523 intergenic not near genes chr2L 9095628 intergenic not near genes chr2L 9095732 intergenic not near genes chr2L_31_9095001 chr2L_9095001 RAL-913 324 chr2L 9190895 9190959 chr2L 9191034 9191069 7 130 1.0 12.5 6.8 0.9 174 chr2L 9190895 intron tai + chr2L 9190982 intron tai + chr2L 9191069 intron tai + chr2L_7_9190001 chr2L_9190001 RAL-913 325 chr2L 9202054 9202076 chr2L 9202134 9202196 5 107 10.5 6.0 8.2 0.5 142 chr2L 9202054 intron tai + chr2L 9202125 intron tai + chr2L 9202196 intron tai + chr2L_5_9200001 chr2L_9200001 RAL-913 326 chr2L 9212226 9212289 chr2L 9212357 9212412 40 129 8.0 13.0 10.5 3.5 186 chr2L 9212226 intron tai + chr2L 9212319 intron tai + chr2L 9212412 intron tai + chr2L_40_9210001 chr2L_9210001 RAL-913 327 chr2L 9217944 9218002 chr2L 9222781 9222847 Doc 14 4843 3.0 2.5 2.8 3.7 4903 chr2L 9217944 intron tai + chr2L 9220396 intron tai + chr2L 9222847 intron tai + chr2L_14_9220001 chr2L_9220001 RAL-913 328 chr2L 9225364 9225409 chr2L 9225494 9225539 11 126 11.0 8.5 9.8 1.0 175 chr2L 9225364 intron tai + chr2L 9225452 intron tai + chr2L 9225539 intron tai + chr2L_11_9225001 chr2L_9225001 RAL-913 329 chr2L 9227175 9227244 chr2L 9227308 9227377 13 131 6.5 8.0 7.2 1.6 202 chr2L 9227175 intron tai + chr2L 9227276 intron tai + chr2L 9227377 intron tai + chr2L_13_9225001 chr2L_9225001 RAL-913 330 chr2L 9232359 9232361 chr2L 21012433 21012498 4 11780121 10.5 20.5 15.5 0.2 11780139 chr2L 9232359 intron tai + chr2L 15122428 intergenic not near genes chr2L 21012498 intron CG42238 - chr2L_4_15120001 chr2L_15120001 RAL-913 331 chr2L 9234891 9234926 chr2L 9235023 9235058 23 132 0.0 17.0 8.5 2.4 167 chr2L 9234891 intron tai + chr2L 9234974 intron tai + chr2L 9235058 intron tai + chr2L_23_9230001 chr2L_9230001 RAL-913 332 chr2L 9279936 9280011 chr2L 9280080 9280155 19 143 6.0 7.5 6.8 2.4 219 chr2L 9279936 intron Ggamma30A + chr2L 9280046 intron Ggamma30A + chr2L 9280155 intron Ggamma30A + chr2L_19_9280001 chr2L_9280001 RAL-913 333 chr2L 9283155 9283182 chr2L 9283282 9283309 13 127 21.0 11.0 16.0 0.8 154 chr2L 9283155 intron Ggamma30A + chr2L 9283232 intron Ggamma30A + chr2L 9283309 intron Ggamma30A + chr2L_13_9280001 chr2L_9280001 RAL-913 334 chr2L 9284980 9285032 chr2L 9285100 9285153 17 120 10.5 4.5 7.5 2.0 173 chr2L 9284980 intron Ggamma30A + chr2L 9285066 intron Ggamma30A + chr2L 9285153 intron Ggamma30A + chr2L_17_9285001 chr2L_9285001 RAL-913 335 chr2L 9287281 9287348 chr2L 9287422 9287495 30 146 10.0 7.0 8.5 3.2 214 chr2L 9287281 intron Ggamma30A + chr2L 9287388 intron Ggamma30A + chr2L 9287495 intron Ggamma30A + chr2L_30_9285001 chr2L_9285001 RAL-913 336 chr2L 9297329 9297400 chr2L 9297456 9297527 32 126 10.0 5.5 7.8 3.6 198 chr2L 9297329 3` UTR Ggamma30A + chr2L 9297428 3` UTR Ggamma30A + chr2L 9297527 3` UTR Ggamma30A + chr2L_32_9295001 chr2L_9295001 RAL-913 337 chr2L 9300641 9300707 chr2L 9300787 9300853 16 146 7.5 7.0 7.2 2.0 212 chr2L 9300641 3` UTR Ggamma30A + chr2L 9300747 3` UTR Ggamma30A + chr2L 9300853 3` UTR Ggamma30A + chr2L_16_9300001 chr2L_9300001 RAL-913 338 chr2L 9304299 9304507 chr2L 9304433 9304636 56 131 1.0 0.0 0.5 37.3 337 chr2L 9304299 intergenic CR42844 - chr2L 9304468 3` UTR CR42844 - chr2L 9304636 3` UTR CR42844 - chr2L_56_9300001 chr2L_9300001 RAL-913 339 chr2L 9334971 9335043 chr2L 9335100 9335159 16 128 6.0 1.0 3.5 3.6 188 chr2L 9334971 intron Eaat1 + chr2L 9335065 intron Eaat1 + chr2L 9335159 intron Eaat1 + chr2L_16_9335001 chr2L_9335001 RAL-913 340 chr2L 9337861 9337930 chr2L 9337988 9338057 15 127 7.5 7.0 7.2 1.8 196 chr2L 9337861 intron Eaat1 + chr2L 9337959 intron Eaat1 + chr2L 9338057 5` UTR Eaat1 + chr2L_15_9335001 chr2L_9335001 RAL-913 341 chr2L 9362098 9362152 chr2L 9362226 9362280 18 128 6.0 7.5 6.8 2.3 182 chr2L 9362098 intergenic not near genes chr2L 9362189 intergenic not near genes chr2L 9362280 intergenic not near genes chr2L_18_9360001 chr2L_9360001 RAL-913 342 chr2L 9380195 9380252 chr2L 9380340 9380398 13 144 5.5 8.0 6.8 1.7 203 chr2L 9380195 exon Shawl - chr2L 9380296 intron Shawl - chr2L 9380398 intron Shawl - chr2L_13_9380001 chr2L_9380001 RAL-913 343 chr2L 9383549 9383566 chr2L 9383677 9383694 11 128 0.0 5.0 2.5 3.1 145 chr2L 9383549 intron Shawl - chr2L 9383622 intron Shawl - chr2L 9383694 intron Shawl - chr2L_11_9380001 chr2L_9380001 RAL-913 344 chr2L 9387202 9387274 chr2L 9387350 9387422 27 148 5.5 7.0 6.2 3.8 220 chr2L 9387202 intron Shawl - chr2L 9387312 intron Shawl - chr2L 9387422 intron,5` UTR Shawl -,Aldh + chr2L_27_9385001 chr2L_9385001 RAL-913 345 chr2L 9393491 9393500 chr2L 9396507 9396516 jockey 5 3016 7.0 17.5 12.2 0.4 3025 chr2L 9393491 intron Shawl - chr2L 9395004 intron Shawl - chr2L 9396516 intron Shawl - chr2L_5_9395001 chr2L_9395001 RAL-913 346 chr2L 9393503 9393530 chr2L 9396505 9396546 jockey 10 3015 2.5 17.5 10.0 0.9 3043 chr2L 9393503 intron Shawl - chr2L 9395024 intron Shawl - chr2L 9396546 intron Shawl - chr2L_10_9395001 chr2L_9395001 RAL-913 347 chr2L 9397340 9397365 chr2L 9397462 9397485 5 125 45.0 40.0 42.5 0.1 145 chr2L 9397340 intron,exon Shawl -,CG4438 - chr2L 9397412 intron,exon Shawl -,CG4438 - chr2L 9397485 intron,exon Shawl -,CG4438 - chr2L_5_9395001 chr2L_9395001 RAL-913 348 chr2L 9397367 9397403 chr2L 9397457 9397520 18 121 35.0 38.0 36.5 0.5 153 chr2L 9397367 intron,exon Shawl -,CG4438 - chr2L 9397444 intron,exon Shawl -,CG4438 - chr2L 9397520 intron,exon Shawl -,CG4438 - chr2L_18_9395001 chr2L_9395001 RAL-913 349 chr2L 9396716 9396792 chr2L 9401121 9401172 6 4391 67.5 23.0 45.2 0.1 4456 chr2L 9396716 intron Shawl - chr2L 9398944 intron Shawl - chr2L 9401172 intron Shawl - chr2L_6_9395001 chr2L_9395001 RAL-913 350 chr2L 9401189 9401206 chr2L 9401516 9401533 4 324 8.5 11.0 9.8 0.4 344 chr2L 9401189 intron Shawl - chr2L 9401361 intron Shawl - chr2L 9401533 intron Shawl - chr2L_4_9400001 chr2L_9400001 RAL-913 351 chr2L 9401207 9401253 chr2L 9401513 9401553 11 318 7.0 11.0 9.0 1.1 346 chr2L 9401207 intron Shawl - chr2L 9401380 intron Shawl - chr2L 9401553 intron Shawl - chr2L_11_9400001 chr2L_9400001 RAL-913 352 chr2L 9407857 9407903 chr2L 9407989 9408035 22 131 8.0 9.5 8.8 2.2 178 chr2L 9407857 intron Shawl - chr2L 9407946 intron Shawl - chr2L 9408035 intron Shawl - chr2L_22_9405001 chr2L_9405001 RAL-913 353 chr2L 9451001 9451066 chr2L 9451154 9451210 15 150 6.0 18.0 12.0 1.2 209 chr2L 9451001 intron numb + chr2L 9451106 intron numb + chr2L 9451210 intron numb + chr2L_15_9450001 chr2L_9450001 RAL-913 354 chr2L 9454930 9454940 chr2L 9455082 9455092 5 152 22.0 7.5 14.8 0.3 162 chr2L 9454930 intron numb + chr2L 9455011 intron numb + chr2L 9455092 intron numb + chr2L_5_9455001 chr2L_9455001 RAL-913 355 chr2L 9454944 9455006 chr2L 9455081 9455160 20 153 8.5 7.5 8.0 2.2 216 chr2L 9454944 intron numb + chr2L 9455052 intron numb + chr2L 9455160 intron numb + chr2L_20_9455001 chr2L_9455001 RAL-913 356 chr2L 9490476 9490544 chr2L 9490605 9490641 24 128 8.0 4.0 6.0 3.4 165 chr2L 9490476 intergenic not near genes chr2L 9490558 intergenic not near genes chr2L 9490641 intergenic not near genes chr2L_24_9490001 chr2L_9490001 RAL-913 357 chr2L 9524096 9524104 chr2L 9524236 9524244 5 140 22.5 14.5 18.5 0.3 148 chr2L 9524096 intron Oatp30B + chr2L 9524170 intron Oatp30B + chr2L 9524244 intron Oatp30B + chr2L_5_9520001 chr2L_9520001 RAL-913 358 chr2L 9524108 9524160 chr2L 9524233 9524300 23 138 10.5 12.0 11.2 1.9 192 chr2L 9524108 intron Oatp30B + chr2L 9524204 intron Oatp30B + chr2L 9524300 intron Oatp30B + chr2L_23_9520001 chr2L_9520001 RAL-913 359 chr2L 9527274 9527311 chr2L 9527406 9527443 19 132 3.5 8.0 5.8 2.8 169 chr2L 9527274 intron Oatp30B + chr2L 9527358 intron Oatp30B + chr2L 9527443 intron Oatp30B + chr2L_19_9525001 chr2L_9525001 RAL-913 360 chr2L 9612802 9612815 chr2L 9612931 9612944 7 129 0.5 0.0 0.2 5.8 142 chr2L 9612802 intergenic gcm2 +,Trx-2 + chr2L 9612873 intergenic gcm2 +,Trx-2 + chr2L 9612944 intergenic Trx-2 +,gcm2 + chr2L_7_9610001 chr2L_9610001 RAL-913 361 chr2L 9619448 9619511 chr2L 9619835 9619898 25 387 12.5 4.5 8.5 2.6 450 chr2L 9619448 intron GlcAT-S + chr2L 9619673 intron GlcAT-S + chr2L 9619898 intron GlcAT-S + chr2L_25_9615001 chr2L_9615001 RAL-913 362 chr2L 9679432 9679442 chr2L 9679562 9679562 6 128 22.5 5.5 14.0 0.4 130 chr2L 9679432 intergenic not near genes chr2L 9679497 intergenic not near genes chr2L 9679562 intergenic not near genes chr2L_6_9675001 chr2L_9675001 RAL-913 363 chr2L 9719756 9719783 chr2L 9719890 9719917 10 134 0.0 11.0 5.5 1.5 161 chr2L 9719756 intron Nckx30C - chr2L 9719836 intron Nckx30C - chr2L 9719917 intron Nckx30C - chr2L_10_9715001 chr2L_9715001 RAL-913 364 chr2L 9770725 9770763 chr2L 9770880 9770918 1360 22 155 7.0 8.5 7.8 2.5 193 chr2L 9770725 intron ppk18 - chr2L 9770822 intron ppk18 - chr2L 9770918 exon ppk18 - chr2L_22_9770001 chr2L_9770001 RAL-913 365 chr2L 9857129 9857196 chr2L 9857262 9857329 29 131 10.0 9.0 9.5 2.8 200 chr2L 9857129 intron nAChRalpha6 - chr2L 9857229 intron nAChRalpha6 - chr2L 9857329 intron nAChRalpha6 - chr2L_29_9855001 chr2L_9855001 RAL-913 366 chr2L 9871475 9871532 chr2L 9871609 9871666 26 133 8.0 7.5 7.8 3.0 191 chr2L 9871475 intron nAChRalpha6 - chr2L 9871570 intron nAChRalpha6 - chr2L 9871666 intron nAChRalpha6 - chr2L_26_9870001 chr2L_9870001 RAL-913 367 chr2L 9973698 9973719 chr2L 9980867 9980886 HMS-Beagle 10 7169 17.0 12.5 14.8 0.6 7188 chr2L 9973698 intergenic not near genes chr2L 9977292 intergenic not near genes chr2L 9980886 intergenic not near genes chr2L_10_9975001 chr2L_9975001 RAL-913 368 chr2L 9973726 9973753 chr2L 9980850 9980922 HMS-Beagle 14 7163 12.0 10.0 11.0 1.2 7196 chr2L 9973726 intergenic not near genes chr2L 9977324 intergenic not near genes chr2L 9980922 intergenic not near genes chr2L_14_9975001 chr2L_9975001 RAL-913 369 chr2L 9986307 9986372 chr2L 9986452 9986487 20 141 12.5 7.0 9.8 1.9 180 chr2L 9986307 intron bib + chr2L 9986397 intron bib + chr2L 9986487 intron bib + chr2L_20_9985001 chr2L_9985001 RAL-913 370 chr2L 10005059 10005121 chr2L 10005202 10005264 26 143 12.0 15.0 13.5 1.8 205 chr2L 10005059 intron CG4747 + chr2L 10005162 intron CG4747 + chr2L 10005264 intron CG4747 + chr2L_26_10005001 chr2L_10005001 RAL-913 371 chr2L 10023023 10023062 chr2L 10023158 10023197 11 135 12.5 4.0 8.2 1.2 174 chr2L 10023023 intergenic not near genes chr2L 10023110 intergenic not near genes chr2L 10023197 intergenic not near genes chr2L_11_10020001 chr2L_10020001 RAL-913 372 chr2L 10023063 10023100 chr2L 10023155 10023235 13 132 3.5 4.0 3.8 2.7 172 chr2L 10023063 intergenic not near genes chr2L 10023149 intergenic not near genes chr2L 10023235 intergenic not near genes chr2L_13_10020001 chr2L_10020001 RAL-913 373 chr2L 10039068 10039094 chr2L 10039339 10039365 16 271 17.5 11.0 14.2 1.1 297 chr2L 10039068 intergenic obst-B + chr2L 10039216 intergenic obst-B + chr2L 10039365 intergenic obst-B + chr2L_16_10035001 chr2L_10035001 RAL-913 374 chr2L 10051681 10051716 chr2L 10051816 10051851 8 132 10.0 6.5 8.2 0.9 170 chr2L 10051681 5` UTR CR44874 + chr2L 10051766 5` UTR CR44874 + chr2L 10051851 5` UTR CR44874 + chr2L_8_10050001 chr2L_10050001 RAL-913 375 chr2L 10051719 10051750 chr2L 10051809 10051885 10 124 4.5 6.0 5.2 1.6 166 chr2L 10051719 5` UTR CR44874 + chr2L 10051802 5` UTR CR44874 + chr2L 10051885 5` UTR CR44874 + chr2L_10_10050001 chr2L_10050001 RAL-913 376 chr2L 10095588 10095659 chr2L 10095718 10095789 11 129 25.0 27.0 26.0 0.4 201 chr2L 10095588 intron CG44153 - chr2L 10095688 intron CG44153 - chr2L 10095789 intron CG44153 - chr2L_11_10095001 chr2L_10095001 RAL-913 377 chr2L 10102570 10102612 chr2L 10102685 10102736 12 129 24.5 19.0 21.8 0.5 166 chr2L 10102570 intron,intron CG44153 -,CG34109 + chr2L 10102653 intron,intron CG44153 -,CG34109 + chr2L 10102736 intron,intron CG44153 -,CG34109 + chr2L_12_10100001 chr2L_10100001 RAL-913 378 chr2L 10138142 10138190 chr2L 10143438 10143486 Rt1c 14 5293 8.0 15.5 11.8 1.1 5344 chr2L 10138142 intron CG44153 - chr2L 10140814 intron CG44153 - chr2L 10143486 intron CG44153 - chr2L_14_10140001 chr2L_10140001 RAL-913 379 chr2L 10153156 10153221 chr2L 10153285 10153348 8 129 16.0 15.5 15.8 0.5 192 chr2L 10153156 intron,exon CG44153 -,CG4839 + chr2L 10153252 intron,intron CG44153 -,CG4839 + chr2L 10153348 intron,exon CG44153 -,CG4839 + chr2L_8_10150001 chr2L_10150001 RAL-913 380 chr2L 10156282 10156343 chr2L 10163802 10163863 blood 30 7518 8.0 11.0 9.5 2.9 7581 chr2L 10156282 intron,3` UTR CG44153 -,CG4839 + chr2L 10160072 intron CG44153 - chr2L 10163863 intron CG44153 - chr2L_30_10160001 chr2L_10160001 RAL-913 381 chr2L 10171120 10171182 chr2L 10171268 10171330 12 147 6.0 14.5 10.2 1.1 210 chr2L 10171120 intron CG44153 - chr2L 10171225 intron CG44153 - chr2L 10171330 intron CG44153 - chr2L_12_10170001 chr2L_10170001 RAL-913 382 chr2L 10175613 10175652 chr2L 10175750 10175788 9 136 13.5 15.5 14.5 0.6 175 chr2L 10175613 intron CG44153 - chr2L 10175700 intron CG44153 - chr2L 10175788 intron CG44153 - chr2L_9_10175001 chr2L_10175001 RAL-913 383 chr2L 10176528 10176569 chr2L 10176861 10176900 13 332 17.5 20.0 18.8 0.7 372 chr2L 10176528 intron CG44153 - chr2L 10176714 intron CG44153 - chr2L 10176900 intron CG44153 - chr2L_13_10175001 chr2L_10175001 RAL-913 384 chr2L 10177356 10177393 chr2L 10177486 10177523 11 130 7.5 7.0 7.2 1.3 167 chr2L 10177356 intron CG44153 - chr2L 10177440 intron CG44153 - chr2L 10177523 intron CG44153 - chr2L_11_10175001 chr2L_10175001 RAL-913 385 chr2L 10180545 10180563 chr2L 10180682 10180700 6 137 11.5 0.0 5.8 0.9 155 chr2L 10180545 intergenic CG44153 - chr2L 10180622 intergenic CG44153 - chr2L 10180700 intergenic CG44153 - chr2L_6_10180001 chr2L_10180001 RAL-913 386 chr2L 10191419 10191483 chr2L 10191542 10191616 15 132 17.0 9.0 13.0 1.1 197 chr2L 10191419 intron,exon Sur -,CG31874 - chr2L 10191518 intron Sur - chr2L 10191616 exon Sur - chr2L_15_10190001 chr2L_10190001 RAL-913 387 chr2L 10209798 10209819 chr2L 10209925 10209946 13 127 13.0 4.0 8.5 1.4 148 chr2L 10209798 intergenic CR44845 +,CG5731 -,CG5727 - chr2L 10209872 3` UTR CG5727 - chr2L 10209946 3` UTR CG5727 - chr2L_13_10205001 chr2L_10205001 RAL-913 388 chr2L 10232886 10232940 chr2L 10233014 10233068 10 128 23.0 18.5 20.8 0.5 182 chr2L 10232886 intron eEF1delta + chr2L 10232977 intron eEF1delta + chr2L 10233068 intron eEF1delta + chr2L_10_10230001 chr2L_10230001 RAL-913 389 chr2L 10258385 10258437 chr2L 10258517 10258572 7 134 17.5 20.0 18.8 0.4 187 chr2L 10258385 exon Pten - chr2L 10258478 intron Pten - chr2L 10258572 exon Pten - chr2L_7_10255001 chr2L_10255001 RAL-913 390 chr2L 10294627 10294688 chr2L 10294763 10294824 23 135 12.5 4.0 8.2 2.5 197 chr2L 10294627 exon Hand - chr2L 10294726 intron Hand - chr2L 10294824 intron Hand - chr2L_23_10290001 chr2L_10290001 RAL-913 391 chr2L 10348334 10348405 chr2L 10348467 10348538 20 133 18.5 14.0 16.2 1.2 204 chr2L 10348334 intron CG34367 - chr2L 10348436 intron CG34367 - chr2L 10348538 intron CG34367 - chr2L_20_10345001 chr2L_10345001 RAL-913 392 chr2L 10421281 10421323 chr2L 10421389 10421410 4 108 8.5 8.5 8.5 0.4 129 chr2L 10421281 exon pie - chr2L 10421346 exon pie - chr2L 10421410 exon pie - chr2L_4_10420001 chr2L_10420001 RAL-913 393 chr2L 10447024 10447093 chr2L 10447184 10447252 9 160 10.0 17.0 13.5 0.6 228 chr2L 10447024 intron loh + chr2L 10447138 intron loh + chr2L 10447252 intron loh + chr2L_9_10445001 chr2L_10445001 RAL-913 394 chr2L 10458064 10458083 chr2L 10458375 10458394 4 311 16.0 16.0 16.0 0.2 330 chr2L 10458064 intron LM408 + chr2L 10458229 intron LM408 + chr2L 10458394 intron LM408 + chr2L_4_10455001 chr2L_10455001 RAL-913 395 chr2L 10458180 10458202 chr2L 10458325 10458348 4 146 0.0 8.5 4.2 0.8 168 chr2L 10458180 intron LM408 + chr2L 10458264 intron LM408 + chr2L 10458348 intron LM408 + chr2L_4_10455001 chr2L_10455001 RAL-913 396 chr2L 10492098 10492164 chr2L 10492256 10492322 11 158 31.5 26.0 28.8 0.4 224 chr2L 10492098 3` UTR Myo31DF - chr2L 10492210 3` UTR Myo31DF - chr2L 10492322 3` UTR Myo31DF - chr2L_11_10490001 chr2L_10490001 RAL-913 397 chr2L 10500021 10500077 chr2L 10500157 10500213 5 136 8.5 10.0 9.2 0.5 192 chr2L 10500021 intron Myo31DF - chr2L 10500117 intron Myo31DF - chr2L 10500213 intron Myo31DF - chr2L_5_10500001 chr2L_10500001 RAL-913 398 chr2L 10515316 10515387 chr2L 10515459 10515530 34 143 7.5 8.0 7.8 3.9 214 chr2L 10515316 intron,intron CG45083 -,Fatp - chr2L 10515423 intron,intron CG45083 -,Fatp - chr2L 10515530 intron,intron CG45083 -,Fatp - chr2L_34_10515001 chr2L_10515001 RAL-913 399 chr2L 10524691 10524872 chr2L 10524845 10525030 5 155 32.5 35.0 33.8 0.1 339 chr2L 10524691 intergenic not near genes chr2L 10524860 intergenic not near genes chr2L 10525030 intergenic not near genes chr2L_5_10520001 chr2L_10520001 RAL-913 400 chr2L 10534134 10534175 chr2L 10534271 10534311 9 137 29.0 37.0 33.0 0.3 177 chr2L 10534134 intergenic CG18302 +,CG18301 + chr2L 10534222 intergenic CG18302 + chr2L 10534311 intergenic CG18302 + chr2L_9_10530001 chr2L_10530001 RAL-913 401 chr2L 10540823 10540875 chr2L 10540951 10541003 20 127 10.5 9.5 10.0 1.8 180 chr2L 10540823 intergenic not near genes chr2L 10540913 intergenic not near genes chr2L 10541003 intergenic not near genes chr2L_20_10540001 chr2L_10540001 RAL-913 402 chr2L 10572659 10572725 chr2L 10572790 10572856 27 131 7.0 8.0 7.5 3.2 197 chr2L 10572659 intron Trim9 + chr2L 10572758 intron Trim9 + chr2L 10572856 intron Trim9 + chr2L_27_10570001 chr2L_10570001 RAL-913 403 chr2L 10580644 10580812 chr2L 10580770 10580943 50 128 12.5 21.0 16.8 2.8 299 chr2L 10580644 intron Trim9 + chr2L 10580794 intron Trim9 + chr2L 10580943 intron Trim9 + chr2L_50_10580001 chr2L_10580001 RAL-913 404 chr2L 10589026 10589079 chr2L 10589152 10589205 7 126 27.0 30.5 28.8 0.2 179 chr2L 10589026 intron Trim9 + chr2L 10589116 intron Trim9 + chr2L 10589205 intron Trim9 + chr2L_7_10585001 chr2L_10585001 RAL-913 405 chr2L 10592795 10592868 chr2L 10600507 10600580 opus 27 7711 8.0 5.0 6.5 3.6 7785 chr2L 10592795 intron Trim9 + chr2L 10596688 intron Trim9 + chr2L 10600580 intron Trim9 + chr2L_27_10595001 chr2L_10595001 RAL-913 406 chr2L 10631161 10631239 chr2L 10631343 10631427 15 185 7.0 0.0 3.5 3.3 266 chr2L 10631161 intron CG7329 - chr2L 10631294 intron CG7329 - chr2L 10631427 intron CG7329 - chr2L_15_10630001 chr2L_10630001 RAL-913 407 chr2L 10640596 10640664 chr2L 10640735 10640803 18 138 14.0 6.5 10.2 1.6 207 chr2L 10640596 exon CG31872 + chr2L 10640700 exon CG31872 + chr2L 10640803 exon CG31872 + chr2L_18_10640001 chr2L_10640001 RAL-913 408 chr2L 10678995 10679029 chr2L 10679124 10679168 9 136 13.5 14.0 13.8 0.6 173 chr2L 10678995 exon CG17104 + chr2L 10679082 exon CG17104 + chr2L 10679168 exon CG17104 + chr2L_9_10675001 chr2L_10675001 RAL-913 409 chr2L 10683400 10683461 chr2L 10683529 10683590 10 129 32.0 22.5 27.2 0.4 190 chr2L 10683400 intergenic CG7299 - chr2L 10683495 3` UTR CG7299 - chr2L 10683590 3` UTR CG7299 - chr2L_10_10680001 chr2L_10680001 RAL-913 410 chr2L 10687552 10687598 chr2L 10687685 10687731 7 133 27.5 32.0 29.8 0.2 179 chr2L 10687552 intergenic CG7296 - chr2L 10687642 intergenic not near genes chr2L 10687731 intergenic not near genes chr2L_7_10685001 chr2L_10685001 RAL-913 411 chr2L 10698078 10698158 chr2L 10698211 10698291 22 132 18.5 19.0 18.8 1.1 213 chr2L 10698078 5` UTR CR44181 + chr2L 10698184 5` UTR CR44181 + chr2L 10698291 intergenic CR44181 +,CG7300 - chr2L_22_10695001 chr2L_10695001 RAL-913 412 chr2L 10698524 10698595 chr2L 10698656 10698738 14 136 12.0 16.5 14.2 0.9 214 chr2L 10698524 intergenic CR44181 +,CG7300 - chr2L 10698631 intergenic CR44181 + chr2L 10698738 intergenic not near genes chr2L_14_10695001 chr2L_10695001 RAL-913 413 chr2L 10704866 10704937 chr2L 10705011 10705082 16 145 14.0 9.5 11.8 1.2 216 chr2L 10704866 intron,exon Lip2 -,CG6415 + chr2L 10704974 intron Lip2 - chr2L 10705082 exon Lip2 - chr2L_16_10700001 chr2L_10700001 RAL-913 414 chr2L 10721235 10721274 chr2L 10721364 10721403 8 129 36.5 33.0 34.8 0.2 168 chr2L 10721235 intergenic not near genes chr2L 10721319 intergenic not near genes chr2L 10721403 intergenic not near genes chr2L_8_10720001 chr2L_10720001 RAL-913 415 chr2L 10723488 10723553 chr2L 10723632 10723697 18 144 14.5 8.5 11.5 1.4 209 chr2L 10723488 intergenic not near genes chr2L 10723592 intergenic not near genes chr2L 10723697 intergenic not near genes chr2L_18_10720001 chr2L_10720001 RAL-913 416 chr2L 10785060 10785088 chr2L 10785185 10785214 10 124 20.5 22.5 21.5 0.4 154 chr2L 10785060 intron CG31869 - chr2L 10785137 intron CG31869 - chr2L 10785214 intron CG31869 - chr2L_10_10785001 chr2L_10785001 RAL-913 417 chr2L 10813633 10813684 chr2L 10813835 10813886 6 202 41.0 33.0 37.0 0.2 253 chr2L 10813633 intron Nos - chr2L 10813760 intron Nos - chr2L 10813886 intron Nos - chr2L_6_10810001 chr2L_10810001 RAL-913 418 chr2L 10836298 10836358 chr2L 10836429 10836489 8 131 22.0 28.0 25.0 0.3 191 chr2L 10836298 intron Nos - chr2L 10836394 intron Nos - chr2L 10836489 intron Nos - chr2L_8_10835001 chr2L_10835001 RAL-913 419 chr2L 10836736 10836776 chr2L 10836864 10836904 11 128 25.5 28.5 27.0 0.4 168 chr2L 10836736 intron Nos - chr2L 10836820 intron Nos - chr2L 10836904 intron Nos - chr2L_11_10835001 chr2L_10835001 RAL-913 420 chr2L 10852138 10852169 chr2L 10852277 10852308 10 139 25.5 33.0 29.2 0.3 170 chr2L 10852138 intron CG43129 + chr2L 10852223 intron CG43129 + chr2L 10852308 intron CG43129 + chr2L_10_10850001 chr2L_10850001 RAL-913 421 chr2L 10862804 10862867 chr2L 10864457 10864483 Rt1c 21 1653 9.5 7.0 8.2 2.3 1679 chr2L 10862804 3` UTR CR43807 - chr2L 10863644 intron CR43807 - chr2L 10864483 3` UTR CR43807 - chr2L_21_10860001 chr2L_10860001 RAL-913 422 chr2L 10873008 10873078 chr2L 10873138 10873208 8 130 20.5 25.0 22.8 0.3 200 chr2L 10873008 intergenic not near genes chr2L 10873108 intergenic not near genes chr2L 10873208 intergenic not near genes chr2L_8_10870001 chr2L_10870001 RAL-913 423 chr2L 10873389 10873402 chr2L 10873609 10873622 4 220 8.0 8.0 8.0 0.4 233 chr2L 10873389 intergenic not near genes chr2L 10873506 intergenic not near genes chr2L 10873622 intergenic not near genes chr2L_4_10870001 chr2L_10870001 RAL-913 424 chr2L 10876532 10876560 chr2L 10883638 10883666 297 10 7106 12.0 4.5 8.2 1.1 7134 chr2L 10876532 intergenic not near genes chr2L 10880099 intergenic not near genes chr2L 10883666 intergenic not near genes chr2L_10_10880001 chr2L_10880001 RAL-913 425 chr2L 10884364 10884401 chr2L 10884449 10884500 10 112 14.0 12.5 13.2 0.7 136 chr2L 10884364 intergenic not near genes chr2L 10884432 intergenic not near genes chr2L 10884500 intergenic not near genes chr2L_10_10880001 chr2L_10880001 RAL-913 426 chr2L 10912978 10913001 chr2L 10913090 10913130 5 122 19.5 26.0 22.8 0.2 152 chr2L 10912978 intergenic not near genes chr2L 10913054 intergenic not near genes chr2L 10913130 intergenic not near genes chr2L_5_10910001 chr2L_10910001 RAL-913 427 chr2L 10945025 10945093 chr2L 10945334 10945402 4 309 6.0 22.0 14.0 0.3 377 chr2L 10945025 intron dpr2 - chr2L 10945214 intron dpr2 - chr2L 10945402 intron dpr2 - chr2L_4_10945001 chr2L_10945001 RAL-913 428 chr2L 10946910 10946971 chr2L 10956175 10956234 roo 14 9264 9.0 15.0 12.0 1.1 9324 chr2L 10946910 intron dpr2 - chr2L 10951572 intron dpr2 - chr2L 10956234 intron dpr2 - chr2L_14_10950001 chr2L_10950001 RAL-913 429 chr2L 10986884 10986934 chr2L 10987018 10987068 7 134 39.5 25.0 32.2 0.2 184 chr2L 10986884 intron piwi - chr2L 10986976 intron piwi - chr2L 10987068 intron piwi - chr2L_7_10985001 chr2L_10985001 RAL-913 430 chr2L 11012266 11012288 chr2L 11012404 11012426 6 138 24.5 21.0 22.8 0.3 160 chr2L 11012266 intergenic dUTPase + chr2L 11012346 intergenic dUTPase + chr2L 11012426 intergenic dUTPase + chr2L_6_11010001 chr2L_11010001 RAL-913 431 chr2L 11146453 11146521 chr2L 11146581 11146649 4 128 18.0 16.5 17.2 0.2 196 chr2L 11146453 intron Gyc32E - chr2L 11146551 intron Gyc32E - chr2L 11146649 intron Gyc32E - chr2L_4_11145001 chr2L_11145001 RAL-913 432 chr2L 11147754 11147828 chr2L 11148051 11148124 16 296 21.0 24.0 22.5 0.7 370 chr2L 11147754 intron Gyc32E - chr2L 11147939 intron Gyc32E - chr2L 11148124 intron Gyc32E - chr2L_16_11145001 chr2L_11145001 RAL-913 433 chr2L 11174586 11174660 chr2L 11174715 11174787 13 124 7.0 9.0 8.0 1.4 201 chr2L 11174586 intron Ca-beta - chr2L 11174686 intron Ca-beta - chr2L 11174787 intron Ca-beta - chr2L_13_11170001 chr2L_11170001 RAL-913 434 chr2L 11183741 11183798 chr2L 11183887 11183944 14 145 29.0 27.0 28.0 0.5 203 chr2L 11183741 intron Ca-beta - chr2L 11183842 intron Ca-beta - chr2L 11183944 intron Ca-beta - chr2L_14_11180001 chr2L_11180001 RAL-913 435 chr2L 11191432 11191448 chr2L 11191558 11191576 5 127 6.5 4.5 5.5 0.8 144 chr2L 11191432 intron Ca-beta - chr2L 11191504 intron Ca-beta - chr2L 11191576 intron Ca-beta - chr2L_5_11190001 chr2L_11190001 RAL-913 436 chr2L 11211094 11211109 chr2L 11211230 11211245 4 136 22.5 17.0 19.8 0.2 151 chr2L 11211094 intron ab + chr2L 11211170 intron ab + chr2L 11211245 intron ab + chr2L_4_11210001 chr2L_11210001 RAL-913 437 chr2L 11211110 11211129 chr2L 11211226 11211251 4 128 22.0 17.0 19.5 0.2 141 chr2L 11211110 intron ab + chr2L 11211180 intron ab + chr2L 11211251 intron ab + chr2L_4_11210001 chr2L_11210001 RAL-913 438 chr2L 11211135 11211164 chr2L 11211223 11211264 7 119 18.5 16.0 17.2 0.4 129 chr2L 11211135 intron ab + chr2L 11211200 intron ab + chr2L 11211264 intron ab + chr2L_7_11210001 chr2L_11210001 RAL-913 439 chr2L 11224011 11224083 chr2L 11224172 11224244 25 160 19.5 20.0 19.8 1.2 233 chr2L 11224011 intron ab + chr2L 11224128 intron ab + chr2L 11224244 intron ab + chr2L_25_11220001 chr2L_11220001 RAL-913 440 chr2L 11240465 11240525 chr2L 11240640 11240701 12 174 18.0 17.5 17.8 0.6 236 chr2L 11240465 intron ab + chr2L 11240583 intron ab + chr2L 11240701 intron ab + chr2L_12_11240001 chr2L_11240001 RAL-913 441 chr2L 11248538 11248586 chr2L 11248665 11248702 6 123 21.0 15.5 18.2 0.3 164 chr2L 11248538 intron ab + chr2L 11248620 intron ab + chr2L 11248702 intron ab + chr2L_6_11245001 chr2L_11245001 RAL-913 442 chr2L 11292330 11292400 chr2L 11292461 11292532 35 130 12.0 10.0 11.0 2.9 202 chr2L 11292330 intergenic not near genes chr2L 11292431 intergenic not near genes chr2L 11292532 intergenic not near genes chr2L_35_11290001 chr2L_11290001 RAL-913 443 chr2L 11293673 11293749 chr2L 11293860 11293936 12 185 10.0 9.0 9.5 1.1 263 chr2L 11293673 intergenic not near genes chr2L 11293804 intergenic not near genes chr2L 11293936 intergenic not near genes chr2L_12_11290001 chr2L_11290001 RAL-913 444 chr2L 11298799 11298852 chr2L 11298926 11298979 13 127 18.5 18.5 18.5 0.7 180 chr2L 11298799 intergenic not near genes chr2L 11298889 intergenic not near genes chr2L 11298979 intergenic not near genes chr2L_13_11295001 chr2L_11295001 RAL-913 445 chr2L 11308964 11309015 chr2L 11309116 11309163 4 151 20.5 20.0 20.2 0.2 199 chr2L 11308964 intergenic not near genes chr2L 11309064 intergenic not near genes chr2L 11309163 intergenic not near genes chr2L_4_11305001 chr2L_11305001 RAL-913 446 chr2L 11315218 11315263 chr2L 11317672 11317703 G2 11 2451 12.5 5.5 9.0 1.1 2485 chr2L 11315218 intergenic not near genes chr2L 11316460 intergenic not near genes chr2L 11317703 intergenic not near genes chr2L_11_11315001 chr2L_11315001 RAL-913 447 chr2L 11332000 11332063 chr2L 11332156 11332163 6 144 12.5 2.5 7.5 0.7 163 chr2L 11332000 3` UTR CR44584 - chr2L 11332082 3` UTR CR44584 - chr2L 11332163 3` UTR CR44584 - chr2L_6_11330001 chr2L_11330001 RAL-913 448 chr2L 11339701 11339741 chr2L 11339816 11339868 10 124 11.0 15.0 13.0 0.7 167 chr2L 11339701 intergenic not near genes chr2L 11339784 intergenic not near genes chr2L 11339868 intergenic not near genes chr2L_10_11335001 chr2L_11335001 RAL-913 449 chr2L 11356357 11356423 chr2L 11356518 11356584 29 157 8.0 2.5 5.2 4.7 227 chr2L 11356357 intergenic not near genes chr2L 11356470 intergenic not near genes chr2L 11356584 intergenic not near genes chr2L_29_11355001 chr2L_11355001 RAL-913 450 chr2L 11360394 11360447 chr2L 11360530 11360583 10 135 26.0 27.0 26.5 0.4 189 chr2L 11360394 intron salr + chr2L 11360488 intron salr + chr2L 11360583 intron salr + chr2L_10_11360001 chr2L_11360001 RAL-913 451 chr2L 11363102 11363113 chr2L 11363209 11363216 4 108 17.5 23.5 20.5 0.2 114 chr2L 11363102 intron salr + chr2L 11363159 intron salr + chr2L 11363216 intron salr + chr2L_4_11360001 chr2L_11360001 RAL-913 452 chr2L 11380585 11380629 chr2L 11380713 11380756 8 127 19.0 23.0 21.0 0.4 171 chr2L 11380585 intergenic not near genes chr2L 11380670 intergenic not near genes chr2L 11380756 intergenic not near genes chr2L_8_11380001 chr2L_11380001 RAL-913 453 chr2L 11394237 11394299 chr2L 11394371 11394429 21 134 8.0 6.0 7.0 2.6 192 chr2L 11394237 intergenic not near genes chr2L 11394333 intergenic not near genes chr2L 11394429 intergenic not near genes chr2L_21_11390001 chr2L_11390001 RAL-913 454 chr2L 11399478 11399531 chr2L 11399608 11399658 5 128 16.0 10.5 13.2 0.4 180 chr2L 11399478 intergenic not near genes chr2L 11399568 intergenic not near genes chr2L 11399658 intergenic not near genes chr2L_5_11395001 chr2L_11395001 RAL-913 455 chr2L 11401703 11401759 chr2L 11401829 11401846 14 123 18.5 19.5 19.0 0.7 143 chr2L 11401703 intergenic not near genes chr2L 11401774 intergenic not near genes chr2L 11401846 intergenic not near genes chr2L_14_11400001 chr2L_11400001 RAL-913 456 chr2L 11418607 11418677 chr2L 11418736 11418806 12 126 25.0 23.0 24.0 0.5 199 chr2L 11418607 intergenic not near genes chr2L 11418706 intergenic not near genes chr2L 11418806 intergenic not near genes chr2L_12_11415001 chr2L_11415001 RAL-913 457 chr2L 11428710 11428761 chr2L 11428837 11428888 9 126 6.5 0.0 3.2 2.1 178 chr2L 11428710 intergenic not near genes chr2L 11428799 intergenic not near genes chr2L 11428888 intergenic not near genes chr2L_9_11425001 chr2L_11425001 RAL-913 458 chr2L 11449312 11449329 chr2L 11449454 11449461 5 140 25.0 19.5 22.2 0.2 149 chr2L 11449312 intergenic not near genes chr2L 11449386 intergenic not near genes chr2L 11449461 intergenic not near genes chr2L_5_11445001 chr2L_11445001 RAL-913 459 chr2L 11455519 11455593 chr2L 11455654 11455719 13 131 13.5 15.5 14.5 0.8 200 chr2L 11455519 intergenic not near genes chr2L 11455619 intergenic not near genes chr2L 11455719 intergenic not near genes chr2L_13_11455001 chr2L_11455001 RAL-913 460 chr2L 11483324 11483400 chr2L 11483454 11483515 7 115 20.0 19.5 19.8 0.3 191 chr2L 11483324 intergenic not near genes chr2L 11483420 intergenic not near genes chr2L 11483515 intergenic not near genes chr2L_7_11480001 chr2L_11480001 RAL-913 461 chr2L 11491081 11491159 chr2L 11491212 11491256 25 126 3.5 9.0 6.2 3.5 175 chr2L 11491081 intergenic not near genes chr2L 11491168 intergenic not near genes chr2L 11491256 intergenic not near genes chr2L_25_11490001 chr2L_11490001 RAL-913 462 chr2L 11492977 11492994 chr2L 11493167 11493184 8 190 0.0 12.0 6.0 1.1 207 chr2L 11492977 intergenic not near genes chr2L 11493080 intergenic not near genes chr2L 11493184 intergenic not near genes chr2L_8_11490001 chr2L_11490001 RAL-913 463 chr2L 11536672 11536679 chr2L 11536803 11536803 4 129 21.0 0.0 10.5 0.3 131 chr2L 11536672 exon CG43438 + chr2L 11536738 3` UTR CG43438 + chr2L 11536803 3` UTR CG43438 + chr2L_4_11535001 chr2L_11535001 RAL-913 464 chr2L 11536682 11536806 chr2L 11536802 11536938 5 130 0.0 0.0 0.0 5.0 256 chr2L 11536682 exon CG43438 + chr2L 11536810 3` UTR CG43438 + chr2L 11536938 intergenic CG43438 + chr2L_5_11535001 chr2L_11535001 RAL-913 465 chr2L 11537929 11537996 chr2L 11538072 11538139 26 140 7.5 9.5 8.5 2.7 210 chr2L 11537929 intergenic not near genes chr2L 11538034 intergenic not near genes chr2L 11538139 intergenic not near genes chr2L_26_11535001 chr2L_11535001 RAL-913 466 chr2L 11540545 11540606 chr2L 11547997 11548058 Tabor 38 7452 13.0 11.0 12.0 2.9 7513 chr2L 11540545 intergenic not near genes chr2L 11544302 intergenic not near genes chr2L 11548058 intergenic not near genes chr2L_38_11540001 chr2L_11540001 RAL-913 467 chr2L 11555382 11555428 chr2L 11555551 11555597 19 169 17.0 16.5 16.8 1.1 215 chr2L 11555382 intergenic not near genes chr2L 11555490 intergenic not near genes chr2L 11555597 intergenic not near genes chr2L_19_11555001 chr2L_11555001 RAL-913 468 chr2L 11563601 11563661 chr2L 11568855 11568915 copia 21 5251 5.5 7.5 6.5 2.8 5314 chr2L 11563601 intergenic not near genes chr2L 11566258 intergenic not near genes chr2L 11568915 intergenic not near genes chr2L_21_11565001 chr2L_11565001 RAL-913 469 chr2L 11608886 11608952 chr2L 11609018 11609084 11 132 18.5 18.5 18.5 0.6 198 chr2L 11608886 intron kek2 + chr2L 11608985 intron kek2 + chr2L 11609084 intron kek2 + chr2L_11_11605001 chr2L_11605001 RAL-913 470 chr2L 11610494 11610559 chr2L 11610623 11610687 10 128 31.5 31.5 31.5 0.3 193 chr2L 11610494 intron kek2 + chr2L 11610590 intron,3` UTR kek2 +,spag4 - chr2L 11610687 intron,exon kek2 +,spag4 - chr2L_10_11610001 chr2L_11610001 RAL-913 471 chr2L 11612621 11612688 chr2L 11612759 11612826 19 136 20.0 23.5 21.8 0.8 205 chr2L 11612621 intron kek2 + chr2L 11612724 intron kek2 + chr2L 11612826 intron kek2 + chr2L_19_11610001 chr2L_11610001 RAL-913 472 chr2L 11614040 11614081 chr2L 11615545 11615606 hopper2 10 1531 7.5 8.0 7.8 1.1 1566 chr2L 11614040 intron kek2 + chr2L 11614823 intron kek2 + chr2L 11615606 intron kek2 + chr2L_10_11610001 chr2L_11610001 RAL-913 473 chr2L 11638677 11638748 chr2L 11639284 11639285 14 596 19.5 16.0 17.8 0.7 608 chr2L 11638677 intergenic not near genes chr2L 11638981 intergenic not near genes chr2L 11639285 intergenic not near genes chr2L_14_11635001 chr2L_11635001 RAL-913 474 chr2L 11702021 11702099 chr2L 11702147 11702193 6 116 19.0 23.5 21.2 0.3 172 chr2L 11702021 intergenic not near genes chr2L 11702107 intergenic not near genes chr2L 11702193 intergenic not near genes chr2L_6_11700001 chr2L_11700001 RAL-913 475 chr2L 11704589 11704658 chr2L 11704715 11704784 9 126 9.5 12.0 10.8 0.8 195 chr2L 11704589 intergenic not near genes chr2L 11704686 intergenic not near genes chr2L 11704784 intergenic not near genes chr2L_9_11700001 chr2L_11700001 RAL-913 476 chr2L 11707006 11707059 chr2L 11707160 11707214 13 154 11.5 18.5 15.0 0.8 208 chr2L 11707006 intergenic not near genes chr2L 11707110 intergenic not near genes chr2L 11707214 intergenic not near genes chr2L_13_11705001 chr2L_11705001 RAL-913 477 chr2L 11713466 11713528 chr2L 11720984 11721046 blood 26 7516 9.5 9.5 9.5 2.5 7580 chr2L 11713466 intergenic not near genes chr2L 11717256 intergenic not near genes chr2L 11721046 intergenic CR44143 + chr2L_26_11715001 chr2L_11715001 RAL-913 478 chr2L 11723002 11723061 chr2L 11723309 11723369 5 307 45.5 48.0 46.8 0.1 367 chr2L 11723002 intergenic not near genes chr2L 11723186 intergenic not near genes chr2L 11723369 intergenic not near genes chr2L_5_11720001 chr2L_11720001 RAL-913 479 chr2L 11728574 11728645 chr2L 11728703 11728774 13 128 16.0 16.0 16.0 0.8 200 chr2L 11728574 intergenic not near genes chr2L 11728674 intergenic not near genes chr2L 11728774 intergenic not near genes chr2L_13_11725001 chr2L_11725001 RAL-913 480 chr2L 11732899 11732964 chr2L 11733026 11733085 7 125 28.0 24.5 26.2 0.3 186 chr2L 11732899 intergenic not near genes chr2L 11732992 intergenic not near genes chr2L 11733085 intergenic not near genes chr2L_7_11730001 chr2L_11730001 RAL-913 481 chr2L 11765085 11765154 chr2L 11765218 11765287 21 133 20.5 24.0 22.2 0.9 202 chr2L 11765085 intergenic not near genes chr2L 11765186 intergenic not near genes chr2L 11765287 intergenic not near genes chr2L_21_11765001 chr2L_11765001 RAL-913 482 chr2L 11770553 11770632 chr2L 11770690 11770769 14 137 23.0 22.5 22.8 0.6 216 chr2L 11770553 intergenic not near genes chr2L 11770661 intergenic not near genes chr2L 11770769 intergenic not near genes chr2L_14_11770001 chr2L_11770001 RAL-913 483 chr2L 11784496 11784508 chr2L 11784623 11784635 6 127 23.0 25.5 24.2 0.2 139 chr2L 11784496 intergenic not near genes chr2L 11784566 intergenic not near genes chr2L 11784635 intergenic not near genes chr2L_6_11780001 chr2L_11780001 RAL-913 484 chr2L 11820388 11820450 chr2L 11820523 11820581 21 132 15.0 24.0 19.5 1.0 193 chr2L 11820388 intron Pde1c - chr2L 11820484 intron Pde1c - chr2L 11820581 intron Pde1c - chr2L_21_11820001 chr2L_11820001 RAL-913 485 chr2L 11825659 11825668 chr2L 11825788 11825797 4 129 19.5 0.0 9.8 0.4 138 chr2L 11825659 intron Pde1c - chr2L 11825728 intron Pde1c - chr2L 11825797 intron Pde1c - chr2L_4_11825001 chr2L_11825001 RAL-913 486 chr2L 11826132 11826201 chr2L 11826268 11826304 8 126 9.0 11.5 10.2 0.7 172 chr2L 11826132 intron Pde1c - chr2L 11826218 intron Pde1c - chr2L 11826304 intron Pde1c - chr2L_8_11825001 chr2L_11825001 RAL-913 487 chr2L 11828390 11828465 chr2L 11828516 11828591 12 126 19.5 20.5 20.0 0.6 201 chr2L 11828390 intron,intron Pde1c -,esc - chr2L 11828490 intron,intron Pde1c -,esc - chr2L 11828591 intron,intron Pde1c -,esc - chr2L_12_11825001 chr2L_11825001 RAL-913 488 chr2L 11841305 11841365 chr2L 11841452 11841522 7 153 26.0 22.5 24.2 0.3 217 chr2L 11841305 intron Pde1c - chr2L 11841414 intron Pde1c - chr2L 11841522 intron Pde1c - chr2L_7_11840001 chr2L_11840001 RAL-913 489 chr2L 11854653 11854714 chr2L 11854878 11854939 19 225 20.5 21.5 21.0 0.9 286 chr2L 11854653 intron Pde1c - chr2L 11854796 intron Pde1c - chr2L 11854939 intron Pde1c - chr2L_19_11850001 chr2L_11850001 RAL-913 490 chr2L 11870941 11870978 chr2L 11871069 11871106 11 126 20.0 21.0 20.5 0.5 165 chr2L 11870941 intron Pde1c - chr2L 11871024 intron Pde1c - chr2L 11871106 intron Pde1c - chr2L_11_11870001 chr2L_11870001 RAL-913 491 chr2L 11892495 11892550 chr2L 11892634 11892689 17 139 21.5 18.5 20.0 0.8 194 chr2L 11892495 intron Pde1c - chr2L 11892592 intron Pde1c - chr2L 11892689 intron Pde1c - chr2L_17_11890001 chr2L_11890001 RAL-913 492 chr2L 11910923 11910977 chr2L 11911050 11911105 11 128 25.0 24.0 24.5 0.4 182 chr2L 11910923 intron Pde1c - chr2L 11911014 intron Pde1c - chr2L 11911105 intron Pde1c - chr2L_11_11910001 chr2L_11910001 RAL-913 493 chr2L 11934455 11934533 chr2L 11934586 11934618 7 124 24.5 25.0 24.8 0.3 163 chr2L 11934455 intergenic Or33a + chr2L 11934536 exon Or33a + chr2L 11934618 exon Or33a + chr2L_7_11930001 chr2L_11930001 RAL-913 494 chr2L 11943992 11944036 chr2L 11944116 11944167 5 128 23.5 16.0 19.8 0.2 175 chr2L 11943992 intergenic Cry + chr2L 11944080 intergenic Cry + chr2L 11944167 5` UTR Cry + chr2L_5_11940001 chr2L_11940001 RAL-913 495 chr2L 11954048 11954091 chr2L 11954246 11954254 4 191 25.0 8.0 16.5 0.2 206 chr2L 11954048 3` UTR CR43314 - chr2L 11954151 3` UTR CR43314 - chr2L 11954254 3` UTR CR43314 - chr2L_4_11950001 chr2L_11950001 RAL-913 496 chr2L 12026724 12026776 chr2L 12026963 12027007 12 232 3.0 0.0 1.5 4.8 283 chr2L 12026724 intergenic not near genes chr2L 12026866 intergenic not near genes chr2L 12027007 intergenic dmGlut + chr2L_12_12025001 chr2L_12025001 RAL-913 497 chr2L 12031346 12031415 chr2L 12031477 12031546 9 131 26.0 21.5 23.8 0.4 200 chr2L 12031346 intron dmGlut + chr2L 12031446 intron dmGlut + chr2L 12031546 intron dmGlut + chr2L_9_12030001 chr2L_12030001 RAL-913 498 chr2L 12067280 12067349 chr2L 12074382 12074451 297 26 7102 10.0 8.5 9.2 2.5 7171 chr2L 12067280 intergenic not near genes chr2L 12070866 intergenic not near genes chr2L 12074451 intergenic not near genes chr2L_26_12070001 chr2L_12070001 RAL-913 499 chr2L 12074580 12074597 chr2L 12074743 12074760 8 163 22.5 16.0 19.2 0.4 180 chr2L 12074580 intergenic not near genes chr2L 12074670 intergenic not near genes chr2L 12074760 intergenic not near genes chr2L_8_12070001 chr2L_12070001 RAL-913 500 chr2L 12074881 12074911 chr2L 12075014 12075044 8 133 20.0 24.0 22.0 0.3 163 chr2L 12074881 intergenic not near genes chr2L 12074962 intergenic not near genes chr2L 12075044 intergenic not near genes chr2L_8_12070001 chr2L_12070001 RAL-913 501 chr2L 12131419 12131488 chr2L 12131565 12131634 21 146 30.0 28.5 29.2 0.7 215 chr2L 12131419 exon rho-6 - chr2L 12131526 intron rho-6 - chr2L 12131634 intron rho-6 - chr2L_21_12130001 chr2L_12130001 RAL-913 502 chr2L 12132689 12132741 chr2L 12132825 12132877 23 136 0.5 13.0 6.8 2.9 188 chr2L 12132689 intron rho-6 - chr2L 12132783 intron rho-6 - chr2L 12132877 intron rho-6 - chr2L_23_12130001 chr2L_12130001 RAL-913 503 chr2L 12157561 12157639 chr2L 12157690 12157769 22 129 4.5 7.0 5.8 3.2 208 chr2L 12157561 intron CG31760 + chr2L 12157665 intron CG31760 + chr2L 12157769 intron CG31760 + chr2L_22_12155001 chr2L_12155001 RAL-913 504 chr2L 12158471 12158506 chr2L 12158713 12158747 7 236 14.0 27.0 20.5 0.3 276 chr2L 12158471 intron CG31760 + chr2L 12158609 intron CG31760 + chr2L 12158747 intron CG31760 + chr2L_7_12155001 chr2L_12155001 RAL-913 505 chr2L 12171320 12171329 chr2L 12171478 12171487 5 158 15.0 19.5 17.2 0.3 167 chr2L 12171320 3` UTR CG6583 - chr2L 12171404 3` UTR CG6583 - chr2L 12171487 3` UTR CG6583 - chr2L_5_12170001 chr2L_12170001 RAL-913 506 chr2L 12176171 12176236 chr2L 12176302 12176367 14 131 18.0 28.0 23.0 0.6 196 chr2L 12176171 intron,intron aret +,atilla - chr2L 12176269 intron,intron aret +,atilla - chr2L 12176367 intron,intron aret +,atilla - chr2L_14_12175001 chr2L_12175001 RAL-913 507 chr2L 12192319 12192362 chr2L 12192494 12192537 10 175 20.0 20.0 20.0 0.5 218 chr2L 12192319 intron aret + chr2L 12192428 intron aret + chr2L 12192537 intron aret + chr2L_10_12190001 chr2L_12190001 RAL-913 508 chr2L 12210001 12210044 chr2L 12210140 12210183 8 137 17.0 11.0 14.0 0.5 182 chr2L 12210001 intron,3` UTR aret +,CG31759 + chr2L 12210092 intron aret + chr2L 12210183 intron aret + chr2L_8_12210001 chr2L_12210001 RAL-913 509 chr2L 12229528 12229582 chr2L 12229654 12229709 8 126 10.0 15.5 12.8 0.6 181 chr2L 12229528 intron aret + chr2L 12229618 intron aret + chr2L 12229709 intron aret + chr2L_8_12225001 chr2L_12225001 RAL-913 510 chr2L 12255779 12255920 chr2L 12255906 12256136 12 181 12.5 16.5 14.5 0.8 357 chr2L 12255779 intron aret + chr2L 12255958 intron aret + chr2L 12256136 intron aret + chr2L_12_12255001 chr2L_12255001 RAL-913 511 chr2L 12256212 12256268 chr2L 12256367 12256423 11 155 10.5 8.5 9.5 1.0 211 chr2L 12256212 intron aret + chr2L 12256318 intron aret + chr2L 12256423 intron aret + chr2L_11_12255001 chr2L_12255001 RAL-913 512 chr2L 12262804 12262862 chr2L 12262932 12262996 9 133 21.0 25.0 23.0 0.4 192 chr2L 12262804 intron aret + chr2L 12262900 intron aret + chr2L 12262996 intron aret + chr2L_9_12260001 chr2L_12260001 RAL-913 513 chr2L 12266055 12266127 chr2L 12266187 12266259 16 132 21.0 18.0 19.5 0.8 204 chr2L 12266055 intron aret + chr2L 12266157 intron aret + chr2L 12266259 intron aret + chr2L_16_12265001 chr2L_12265001 RAL-913 514 chr2L 12269363 12269400 chr2L 12269491 12269528 9 128 10.5 7.0 8.8 0.9 165 chr2L 12269363 intron aret + chr2L 12269446 intron aret + chr2L 12269528 intron aret + chr2L_9_12265001 chr2L_12265001 RAL-913 515 chr2L 12271365 12271413 chr2L 12271529 12271577 6 162 8.0 16.0 12.0 0.5 212 chr2L 12271365 intron aret + chr2L 12271471 intron aret + chr2L 12271577 intron aret + chr2L_6_12270001 chr2L_12270001 RAL-913 516 chr2L 12272119 12272163 chr2L 12272247 12272289 12 128 4.5 6.5 5.5 1.8 170 chr2L 12272119 intron aret + chr2L 12272204 intron aret + chr2L 12272289 intron aret + chr2L_12_12270001 chr2L_12270001 RAL-913 517 chr2L 12275149 12275171 chr2L 12275286 12275308 9 136 7.0 8.0 7.5 1.1 159 chr2L 12275149 intron aret + chr2L 12275228 intron aret + chr2L 12275308 intron aret + chr2L_9_12275001 chr2L_12275001 RAL-913 518 chr2L 12294203 12294277 chr2L 12294335 12294409 18 132 29.0 28.0 28.5 0.6 206 chr2L 12294203 intron aret + chr2L 12294306 intron aret + chr2L 12294409 intron aret + chr2L_18_12290001 chr2L_12290001 RAL-913 519 chr2L 12305371 12305434 chr2L 12305509 12305572 17 138 22.5 22.0 22.2 0.7 201 chr2L 12305371 intron aret + chr2L 12305472 intron aret + chr2L 12305572 intron aret + chr2L_17_12305001 chr2L_12305001 RAL-913 520 chr2L 12349588 12349658 chr2L 12349732 12349802 16 143 24.5 18.5 21.5 0.7 214 chr2L 12349588 intron bru-2 + chr2L 12349695 intron bru-2 + chr2L 12349802 intron bru-2 + chr2L_16_12345001 chr2L_12345001 RAL-913 521 chr2L 12366819 12366887 chr2L 12366955 12367023 27 136 18.5 20.5 19.5 1.3 204 chr2L 12366819 intron bru-2 + chr2L 12366921 intron bru-2 + chr2L 12367023 intron bru-2 + chr2L_27_12365001 chr2L_12365001 RAL-913 522 chr2L 12394939 12394997 chr2L 12395101 12395159 15 162 25.5 22.0 23.8 0.6 220 chr2L 12394939 intron bru-2 + chr2L 12395049 intron bru-2 + chr2L 12395159 intron bru-2 + chr2L_15_12395001 chr2L_12395001 RAL-913 523 chr2L 12398654 12398669 chr2L 12398758 12398801 4 126 13.0 13.0 13.0 0.3 147 chr2L 12398654 exon Pkd2 + chr2L 12398728 exon Pkd2 + chr2L 12398801 exon Pkd2 + chr2L_4_12395001 chr2L_12395001 RAL-913 524 chr2L 12423710 12423757 chr2L 12423844 12423891 4 134 22.5 24.0 23.2 0.2 181 chr2L 12423710 intergenic vir-1 - chr2L 12423800 intergenic vir-1 - chr2L 12423891 intergenic vir-1 - chr2L_4_12420001 chr2L_12420001 RAL-913 525 chr2L 12424354 12424369 chr2L 12424480 12424495 5 126 14.5 18.0 16.2 0.3 141 chr2L 12424354 intergenic not near genes chr2L 12424424 intergenic CG6405 + chr2L 12424495 intergenic CG6405 + chr2L_5_12420001 chr2L_12420001 RAL-913 526 chr2L 12479504 12479561 chr2L 12479632 12479689 13 128 25.0 22.5 23.8 0.5 185 chr2L 12479504 intron bun - chr2L 12479596 intron bun - chr2L 12479689 intron bun - chr2L_13_12475001 chr2L_12475001 RAL-913 527 chr2L 12481332 12481403 chr2L 12481464 12481535 11 132 20.5 23.0 21.8 0.5 203 chr2L 12481332 intron bun - chr2L 12481434 intron bun - chr2L 12481535 intron bun - chr2L_11_12480001 chr2L_12480001 RAL-913 528 chr2L 12486611 12486680 chr2L 12486742 12486811 7 131 20.5 19.5 20.0 0.3 200 chr2L 12486611 intron bun - chr2L 12486711 intron bun - chr2L 12486811 intron bun - chr2L_7_12485001 chr2L_12485001 RAL-913 529 chr2L 12487848 12487907 chr2L 12487979 12488038 14 129 21.5 23.5 22.5 0.6 190 chr2L 12487848 intron bun - chr2L 12487943 intron bun - chr2L 12488038 intron bun - chr2L_14_12485001 chr2L_12485001 RAL-913 530 chr2L 12496002 12496064 chr2L 12496412 12496474 13 408 8.5 32.0 20.2 0.6 472 chr2L 12496002 intron bun - chr2L 12496238 intron bun - chr2L 12496474 intron bun - chr2L_13_12495001 chr2L_12495001 RAL-913 531 chr2L 12507277 12507296 chr2L 12507417 12507436 5 140 15.5 25.0 20.2 0.2 159 chr2L 12507277 intron bun - chr2L 12507356 intron bun - chr2L 12507436 intron bun - chr2L_5_12505001 chr2L_12505001 RAL-913 532 chr2L 12515600 12515675 chr2L 12515816 12515892 18 217 14.5 12.0 13.2 1.3 292 chr2L 12515600 intron bun - chr2L 12515746 intron bun - chr2L 12515892 intron bun - chr2L_18_12515001 chr2L_12515001 RAL-913 533 chr2L 12527160 12527169 chr2L 12527355 12527359 7 194 37.0 16.5 26.8 0.3 199 chr2L 12527160 intron bun - chr2L 12527260 intron bun - chr2L 12527359 intron bun - chr2L_7_12525001 chr2L_12525001 RAL-913 534 chr2L 12529200 12529380 chr2L 12529383 12529506 14 179 14.0 16.0 15.0 0.9 306 chr2L 12529200 intron bun - chr2L 12529353 intron bun - chr2L 12529506 intron bun - chr2L_14_12525001 chr2L_12525001 RAL-913 535 chr2L 12547424 12547454 chr2L 12547558 12547588 13 132 28.5 22.5 25.5 0.5 164 chr2L 12547424 intergenic not near genes chr2L 12547506 intergenic not near genes chr2L 12547588 intergenic not near genes chr2L_13_12545001 chr2L_12545001 RAL-913 536 chr2L 12558272 12558344 chr2L 12565451 12565523 HMS-Beagle 35 7178 8.5 10.0 9.2 3.4 7251 chr2L 12558272 intergenic not near genes chr2L 12561898 intergenic not near genes chr2L 12565523 intergenic not near genes chr2L_35_12560001 chr2L_12560001 RAL-913 537 chr2L 12619853 12619880 chr2L 12619979 12619996 8 123 28.5 26.5 27.5 0.3 143 chr2L 12619853 intron,intron nub +,Ref2 - chr2L 12619924 intron,intron nub +,Ref2 - chr2L 12619996 intron,intron nub +,Ref2 - chr2L_8_12615001 chr2L_12615001 RAL-913 538 chr2L 12619883 12619893 chr2L 12619978 12620014 5 117 29.0 26.0 27.5 0.2 131 chr2L 12619883 intron,intron nub +,Ref2 - chr2L 12619948 intron,intron nub +,Ref2 - chr2L 12620014 intron,intron nub +,Ref2 - chr2L_5_12615001 chr2L_12615001 RAL-913 539 chr2L 12652895 12652960 chr2L 12653125 12653190 15 227 21.0 20.5 20.8 0.7 295 chr2L 12652895 intergenic not near genes chr2L 12653042 intergenic not near genes chr2L 12653190 intergenic not near genes chr2L_15_12650001 chr2L_12650001 RAL-913 540 chr2L 12653738 12653812 chr2L 12653905 12653979 26 167 22.0 23.5 22.8 1.1 241 chr2L 12653738 intergenic not near genes chr2L 12653858 intergenic not near genes chr2L 12653979 intergenic not near genes chr2L_26_12650001 chr2L_12650001 RAL-913 541 chr2L 12677683 12677723 chr2L 12677819 12677859 7 136 26.0 20.0 23.0 0.3 176 chr2L 12677683 intron pdm2 + chr2L 12677771 intron pdm2 + chr2L 12677859 intron pdm2 + chr2L_7_12675001 chr2L_12675001 RAL-913 542 chr2L 12693801 12693867 chr2L 12693928 12693994 8 126 22.0 23.0 22.5 0.3 193 chr2L 12693801 exon CG6153 + chr2L 12693898 3` UTR,3` UTR CG6153 +,CG5780 - chr2L 12693994 exon CG5780 - chr2L_8_12690001 chr2L_12690001 RAL-913 543 chr2L 12717350 12717357 chr2L 12717489 12717490 7 138 23.5 28.0 25.8 0.3 140 chr2L 12717350 intron Pih1D1 - chr2L 12717420 intron Pih1D1 - chr2L 12717490 intron Pih1D1 - chr2L_7_12715001 chr2L_12715001 RAL-913 544 chr2L 12728894 12728938 chr2L 12729186 12729205 pogo 7 288 9.5 17.0 13.2 0.5 311 chr2L 12728894 intron MRP + chr2L 12729050 intron MRP + chr2L 12729205 exon MRP + chr2L_7_12725001 chr2L_12725001 RAL-913 545 chr2L 12731015 12731084 chr2L 12735832 12735901 F-element 32 4817 6.0 10.0 8.0 3.6 4886 chr2L 12731015 intron MRP + chr2L 12733458 intron MRP + chr2L 12735901 intron MRP + chr2L_32_12730001 chr2L_12730001 RAL-913 546 chr2L 12736298 12736359 chr2L 12736433 12736491 12 137 21.0 28.0 24.5 0.5 193 chr2L 12736298 intron MRP + chr2L 12736394 intron MRP + chr2L 12736491 intron MRP + chr2L_12_12735001 chr2L_12735001 RAL-913 547 chr2L 12739139 12739197 chr2L 12743959 12744028 Doc 20 4830 9.5 7.0 8.2 2.2 4889 chr2L 12739139 exon MRP + chr2L 12741584 intron MRP + chr2L 12744028 exon MRP + chr2L_20_12740001 chr2L_12740001 RAL-913 548 chr2L 12751268 12751336 chr2L 12751401 12751469 18 131 24.0 22.5 23.2 0.7 201 chr2L 12751268 intergenic not near genes chr2L 12751368 intergenic not near genes chr2L 12751469 intergenic not near genes chr2L_18_12750001 chr2L_12750001 RAL-913 549 chr2L 12760200 12760253 chr2L 12760346 12760401 10 146 6.0 9.5 7.8 1.1 201 chr2L 12760200 intergenic CG15483 - chr2L 12760300 intergenic CG15483 - chr2L 12760401 3` UTR CG15483 - chr2L_10_12760001 chr2L_12760001 RAL-913 550 chr2L 12763776 12763869 chr2L 12764038 12764131 BS 21 262 0.0 0.5 0.2 17.5 355 chr2L 12763776 intergenic not near genes chr2L 12763954 intergenic not near genes chr2L 12764131 intergenic not near genes chr2L_21_12760001 chr2L_12760001 RAL-913 551 chr2L 12781760 12781802 chr2L 12789253 12789295 Quasimodo 17 7496 11.5 13.5 12.5 1.3 7535 chr2L 12781760 intergenic not near genes chr2L 12785528 intergenic not near genes chr2L 12789295 intergenic not near genes chr2L_17_12785001 chr2L_12785001 RAL-913 552 chr2L 12791568 12791628 chr2L 12795293 12795339 F-element 43 3722 11.5 11.5 11.5 3.4 3771 chr2L 12791568 intergenic not near genes chr2L 12793454 intergenic not near genes chr2L 12795339 intergenic not near genes chr2L_43_12790001 chr2L_12790001 RAL-913 553 chr2L 12861682 12861728 chr2L 12863179 12863225 hobo 31 1512 7.0 5.5 6.2 4.3 1543 chr2L 12861682 intergenic not near genes chr2L 12862454 intergenic not near genes chr2L 12863225 intergenic not near genes chr2L_31_12860001 chr2L_12860001 RAL-913 554 chr2L 12891878 12891954 chr2L 12892013 12892089 22 135 0.0 5.5 2.8 5.8 211 chr2L 12891878 intergenic not near genes chr2L 12891984 intergenic not near genes chr2L 12892089 intergenic not near genes chr2L_22_12890001 chr2L_12890001 RAL-913 555 chr2L 12893990 12894034 chr2L 12895507 12895545 hobo 11 1512 14.0 17.5 15.8 0.7 1555 chr2L 12893990 intergenic not near genes chr2L 12894768 intergenic not near genes chr2L 12895545 intergenic not near genes chr2L_11_12890001 chr2L_12890001 RAL-913 556 chr2L 12894036 12894046 chr2L 12895501 12895551 hobo 5 1494 12.0 16.0 14.0 0.3 1515 chr2L 12894036 intergenic not near genes chr2L 12894794 intergenic not near genes chr2L 12895551 intergenic not near genes chr2L_5_12890001 chr2L_12890001 RAL-913 557 chr2L 12905432 12905494 chr2L 12905566 12905622 34 134 11.0 4.0 7.5 4.0 190 chr2L 12905432 intergenic not near genes chr2L 12905527 intergenic not near genes chr2L 12905622 intergenic not near genes chr2L_34_12905001 chr2L_12905001 RAL-913 558 chr2L 12933806 12933875 chr2L 12941322 12941392 blood 32 7514 10.5 8.0 9.2 3.1 7586 chr2L 12933806 intergenic not near genes chr2L 12937599 intergenic not near genes chr2L 12941392 intergenic not near genes chr2L_32_12935001 chr2L_12935001 RAL-913 559 chr2L 12945935 12946000 chr2L 12946065 12946130 25 126 9.0 9.0 9.0 2.5 195 chr2L 12945935 intergenic not near genes chr2L 12946032 intergenic not near genes chr2L 12946130 intergenic not near genes chr2L_25_12945001 chr2L_12945001 RAL-913 560 chr2L 12963743 12963825 chr2L 12963895 12963977 31 149 6.5 6.0 6.2 4.3 234 chr2L 12963743 intergenic not near genes chr2L 12963860 intergenic not near genes chr2L 12963977 intergenic not near genes chr2L_31_12960001 chr2L_12960001 RAL-913 561 chr2L 13036201 13036268 chr2L 13036493 13036560 X-element 35 292 5.5 9.5 7.5 4.1 359 chr2L 13036201 intron CG9932 - chr2L 13036380 intron CG9932 - chr2L 13036560 intron CG9932 - chr2L_35_13035001 chr2L_13035001 RAL-913 562 chr2L 13069229 13069292 chr2L 13069400 13069457 24 170 7.0 1.5 4.2 4.6 228 chr2L 13069229 intergenic not near genes chr2L 13069343 intergenic not near genes chr2L 13069457 intergenic not near genes chr2L_24_13065001 chr2L_13065001 RAL-913 563 chr2L 13069293 13069299 chr2L 13069399 13069470 4 155 5.0 1.5 3.2 1.0 177 chr2L 13069293 intergenic not near genes chr2L 13069382 intergenic not near genes chr2L 13069470 intergenic not near genes chr2L_4_13065001 chr2L_13065001 RAL-913 564 chr2L 13154060 13154125 chr2L 13154188 13154264 23 131 11.0 0.0 5.5 3.5 204 chr2L 13154060 intergenic not near genes chr2L 13154162 intergenic not near genes chr2L 13154264 intergenic not near genes chr2L_23_13150001 chr2L_13150001 RAL-913 565 chr2L 13204282 13204338 chr2L 13204423 13204487 5 138 7.5 13.0 10.2 0.4 205 chr2L 13204282 intron Pect + chr2L 13204384 intron Pect + chr2L 13204487 intron Pect + chr2L_5_13200001 chr2L_13200001 RAL-913 566 chr2L 13266336 13266347 chr2L 13266474 13266485 6 138 0.5 9.0 4.8 1.0 149 chr2L 13266336 intron CG44085 + chr2L 13266410 intron CG44085 + chr2L 13266485 intron CG44085 + chr2L_6_13265001 chr2L_13265001 RAL-913 567 chr2L 13266350 13266411 chr2L 13266469 13266493 31 132 0.5 7.5 4.0 6.2 143 chr2L 13266350 intron CG44085 + chr2L 13266422 intron CG44085 + chr2L 13266493 intron CG44085 + chr2L_31_13265001 chr2L_13265001 RAL-913 568 chr2L 13316884 13316904 chr2L 13317017 13317017 12 131 7.5 12.5 10.0 1.1 133 chr2L 13316884 intron CG43778 - chr2L 13316950 intron CG43778 - chr2L 13317017 intron CG43778 - chr2L_12_13315001 chr2L_13315001 RAL-913 569 chr2L 13351778 13351839 chr2L 13351903 13351975 20 134 11.0 6.0 8.5 2.1 197 chr2L 13351778 exon CG9395 - chr2L 13351876 intron CG9395 - chr2L 13351975 exon CG9395 - chr2L_20_13350001 chr2L_13350001 RAL-913 570 chr2L 13405606 13405671 chr2L 13410453 13410518 Doc 30 4844 9.5 10.5 10.0 2.7 4912 chr2L 13405606 exon CG7110 + chr2L 13408062 intron CG7110 + chr2L 13410518 exon CG7110 + chr2L_30_13405001 chr2L_13405001 RAL-913 571 chr2L 13449430 13449486 chr2L 13456911 13456972 Quasimodo 16 7486 10.0 11.0 10.5 1.4 7542 chr2L 13449430 intron,intron CG42784 +,Hsp60D - chr2L 13453201 intron CG42784 + chr2L 13456972 intron CG42784 + chr2L_16_13450001 chr2L_13450001 RAL-913 572 chr2L 13481417 13481453 chr2L 13482069 13482110 jockey 23 654 11.5 12.0 11.8 1.8 693 chr2L 13481417 intron CG42784 + chr2L 13481764 intron CG42784 + chr2L 13482110 intron CG42784 + chr2L_23_13480001 chr2L_13480001 RAL-913 573 chr2L 13481454 13481464 chr2L 13482062 13482121 jockey 7 648 11.0 10.5 10.8 0.6 667 chr2L 13481454 intron CG42784 + chr2L 13481788 intron CG42784 + chr2L 13482121 intron CG42784 + chr2L_7_13480001 chr2L_13480001 RAL-913 574 chr2L 13522098 13522160 chr2L 13527659 13527699 Transpac 27 5567 0.0 9.0 4.5 4.9 5601 chr2L 13522098 intron B4 - chr2L 13524898 intron B4 - chr2L 13527699 intron B4 - chr2L_27_13520001 chr2L_13520001 RAL-913 575 chr2L 13543914 13543965 chr2L 13544042 13544067 17 125 16.0 8.5 12.2 1.3 153 chr2L 13543914 intron B4 - chr2L 13543990 intron B4 - chr2L 13544067 intron B4 - chr2L_17_13540001 chr2L_13540001 RAL-913 576 chr2L 13549154 13549182 chr2L 13549247 13549310 15 119 9.0 12.0 10.5 1.3 156 chr2L 13549154 5` UTR B4 - chr2L 13549232 5` UTR B4 - chr2L 13549310 5` UTR B4 - chr2L_15_13545001 chr2L_13545001 RAL-913 577 chr2L 13699516 13699578 chr2L 13699638 13699699 17 124 5.0 10.5 7.8 1.9 183 chr2L 13699516 intron CG31814 - chr2L 13699608 intron CG31814 - chr2L 13699699 intron CG31814 - chr2L_17_13695001 chr2L_13695001 RAL-913 578 chr2L 13713510 13713574 chr2L 13713636 13713700 30 126 5.5 8.5 7.0 3.8 190 chr2L 13713510 intron CG31814 - chr2L 13713605 intron CG31814 - chr2L 13713700 intron CG31814 - chr2L_30_13710001 chr2L_13710001 RAL-913 579 chr2L 13761767 13761773 chr2L 13762928 13762934 Doc 4 1161 24.5 7.0 15.8 0.2 1167 chr2L 13761767 intron TM9SF4 + chr2L 13762350 intron TM9SF4 + chr2L 13762934 intron TM9SF4 + chr2L_4_13760001 chr2L_13760001 RAL-913 580 chr2L 13761776 13761800 chr2L 13762922 13762924 Doc 13 1155 18.0 5.5 11.8 1.0 1148 chr2L 13761776 intron TM9SF4 + chr2L 13762350 intron TM9SF4 + chr2L 13762924 intron TM9SF4 + chr2L_13_13760001 chr2L_13760001 RAL-913 581 chr2L 13761801 13761827 chr2L 13762914 13762982 Doc 11 1156 10.0 3.5 6.8 1.4 1181 chr2L 13761801 intron TM9SF4 + chr2L 13762392 intron TM9SF4 + chr2L 13762982 intron TM9SF4 + chr2L_11_13760001 chr2L_13760001 RAL-913 582 chr2L 13802793 13802829 chr2L 13802923 13802959 11 130 8.5 9.5 9.0 1.1 166 chr2L 13802793 intergenic not near genes chr2L 13802876 intergenic not near genes chr2L 13802959 intergenic not near genes chr2L_11_13800001 chr2L_13800001 RAL-913 583 chr2L 13842085 13842165 chr2L 13842219 13842297 32 133 10.5 0.0 5.2 5.2 212 chr2L 13842085 intron CenG1A + chr2L 13842191 intron CenG1A + chr2L 13842297 intron CenG1A + chr2L_32_13840001 chr2L_13840001 RAL-913 584 chr2L 13842394 13842458 chr2L 13842522 13842579 18 126 1.0 12.5 6.8 2.3 185 chr2L 13842394 intron CenG1A + chr2L 13842486 intron CenG1A + chr2L 13842579 intron CenG1A + chr2L_18_13840001 chr2L_13840001 RAL-913 585 chr2L 13853045 13853114 chr2L 13862245 13862324 roo 26 9202 7.0 0.0 3.5 5.8 9279 chr2L 13853045 intron CenG1A + chr2L 13857684 intron CenG1A + chr2L 13862324 intron CenG1A + chr2L_26_13855001 chr2L_13855001 RAL-913 586 chr2L 13960171 13960187 chr2L 13960256 13960313 11 120 9.5 9.5 9.5 1.0 142 chr2L 13960171 intron NimA + chr2L 13960242 intron NimA + chr2L 13960313 intron NimA + chr2L_11_13960001 chr2L_13960001 RAL-913 587 chr2L 13981478 13981508 chr2L 13981619 13981649 7 141 17.5 9.0 13.2 0.5 171 chr2L 13981478 exon NimC2 + chr2L 13981564 intron NimC2 + chr2L 13981649 intron NimC2 + chr2L_7_13980001 chr2L_13980001 RAL-913 588 chr2L 13981509 13981543 chr2L 13981609 13981653 18 133 9.0 7.0 8.0 2.0 144 chr2L 13981509 exon NimC2 + chr2L 13981581 intron NimC2 + chr2L 13981653 intron NimC2 + chr2L_18_13980001 chr2L_13980001 RAL-913 589 chr2L 14005137 14005208 chr2L 14005259 14005336 6 122 5.0 9.0 7.0 0.8 199 chr2L 14005137 intergenic not near genes chr2L 14005236 intergenic not near genes chr2L 14005336 intergenic not near genes chr2L_6_14005001 chr2L_14005001 RAL-913 590 chr2L 14071950 14072025 chr2L 14072179 14072254 21 224 7.0 4.0 5.5 3.2 304 chr2L 14071950 intron nAChRalpha5 + chr2L 14072102 intron nAChRalpha5 + chr2L 14072254 intron nAChRalpha5 + chr2L_21_14070001 chr2L_14070001 RAL-913 591 chr2L 14148620 14148694 chr2L 14148788 14148862 32 168 4.5 5.5 5.0 5.3 242 chr2L 14148620 intron CG17341 + chr2L 14148741 intron CG17341 + chr2L 14148862 intron CG17341 + chr2L_32_14145001 chr2L_14145001 RAL-913 592 chr2L 14160645 14160711 chr2L 14160781 14160847 32 135 8.5 10.5 9.5 3.0 202 chr2L 14160645 intergenic CG17341 +,CG43332 - chr2L 14160746 intergenic CG17341 +,CG43332 - chr2L 14160847 intergenic CG17341 +,CG43332 - chr2L_32_14160001 chr2L_14160001 RAL-913 593 chr2L 14162127 14162127 chr2L 14162246 14162269 5 132 2.5 15.0 8.8 0.5 142 chr2L 14162127 exon CG43332 - chr2L 14162198 exon CG43332 - chr2L 14162269 exon CG43332 - chr2L_5_14160001 chr2L_14160001 RAL-913 594 chr2L 14222258 14222326 chr2L 14222393 14222463 29 135 11.0 8.0 9.5 2.8 205 chr2L 14222258 intron Dyrk2 - chr2L 14222360 intron Dyrk2 - chr2L 14222463 intron Dyrk2 - chr2L_29_14220001 chr2L_14220001 RAL-913 595 chr2L 14246233 14246315 chr2L 14246360 14246452 18 133 5.5 2.0 3.8 3.8 219 chr2L 14246233 intergenic not near genes chr2L 14246342 intergenic not near genes chr2L 14246452 intergenic not near genes chr2L_18_14245001 chr2L_14245001 RAL-913 596 chr2L 14301711 14301749 chr2L 14301845 14301882 7 134 7.5 0.0 3.8 1.5 171 chr2L 14301711 intron wb + chr2L 14301796 intron wb + chr2L 14301882 intron wb + chr2L_7_14300001 chr2L_14300001 RAL-913 597 chr2L 14333859 14333927 chr2L 14334008 14334073 29 149 5.0 10.0 7.5 3.4 214 chr2L 14333859 3` UTR ms(2)34Fe + chr2L 14333966 intergenic ms(2)34Fe +,CG33090 + chr2L 14334073 intergenic CG33090 +,ms(2)34Fe + chr2L_29_14330001 chr2L_14330001 RAL-913 598 chr2L 14369085 14369152 chr2L 14369251 14369318 28 164 11.0 11.5 11.2 2.3 233 chr2L 14369085 intergenic not near genes chr2L 14369202 intergenic not near genes chr2L 14369318 intergenic not near genes chr2L_28_14365001 chr2L_14365001 RAL-913 599 chr2L 14378601 14378676 chr2L 14378730 14378803 19 128 7.0 4.5 5.8 2.8 202 chr2L 14378601 3` UTR ppk - chr2L 14378702 3` UTR ppk - chr2L 14378803 3` UTR ppk - chr2L_19_14375001 chr2L_14375001 RAL-913 600 chr2L 14413218 14413233 chr2L 14413350 14413358 4 130 20.5 7.0 13.8 0.3 140 chr2L 14413218 intergenic not near genes chr2L 14413288 intergenic not near genes chr2L 14413358 intergenic not near genes chr2L_4_14410001 chr2L_14410001 RAL-913 601 chr2L 14413238 14413283 chr2L 14413340 14413415 25 128 9.5 5.0 7.2 3.0 177 chr2L 14413238 intergenic not near genes chr2L 14413326 intergenic not near genes chr2L 14413415 intergenic not near genes chr2L_25_14410001 chr2L_14410001 RAL-913 602 chr2L 14545608 14545663 chr2L 14545727 14545789 13 125 5.0 5.0 5.0 2.2 181 chr2L 14545608 intergenic not near genes chr2L 14545698 intergenic not near genes chr2L 14545789 intergenic not near genes chr2L_13_14545001 chr2L_14545001 RAL-913 603 chr2L 14555096 14555159 chr2L 14555225 14555288 18 129 7.5 9.0 8.2 2.0 192 chr2L 14555096 intergenic not near genes chr2L 14555192 intergenic not near genes chr2L 14555288 intergenic not near genes chr2L_18_14555001 chr2L_14555001 RAL-913 604 chr2L 14564402 14564473 chr2L 14564544 14564615 32 140 9.5 9.0 9.2 3.1 213 chr2L 14564402 intergenic not near genes chr2L 14564508 intergenic not near genes chr2L 14564615 intergenic not near genes chr2L_32_14560001 chr2L_14560001 RAL-913 605 chr2L 14570671 14570720 chr2L 14570802 14570850 9 130 6.5 4.0 5.2 1.5 179 chr2L 14570671 intergenic not near genes chr2L 14570760 intergenic not near genes chr2L 14570850 intergenic not near genes chr2L_9_14570001 chr2L_14570001 RAL-913 606 chr2L 14588342 14588410 chr2L 14588546 14588579 33 202 1.5 10.0 5.8 4.9 237 chr2L 14588342 intergenic CG42680 - chr2L 14588460 intergenic CG42680 - chr2L 14588579 intergenic CG42680 - chr2L_33_14585001 chr2L_14585001 RAL-913 607 chr2L 14588651 14588670 chr2L 14588992 14589011 16 341 6.5 8.5 7.5 1.9 360 chr2L 14588651 intergenic CG42680 - chr2L 14588831 intergenic not near genes chr2L 14589011 intergenic not near genes chr2L_16_14585001 chr2L_14585001 RAL-913 608 chr2L 14590151 14590164 chr2L 14590281 14590294 6 130 22.5 11.5 17.0 0.3 143 chr2L 14590151 intergenic not near genes chr2L 14590222 intergenic not near genes chr2L 14590294 intergenic not near genes chr2L_6_14590001 chr2L_14590001 RAL-913 609 chr2L 14590168 14590216 chr2L 14590280 14590346 26 127 7.0 11.0 9.0 2.6 178 chr2L 14590168 intergenic not near genes chr2L 14590257 intergenic not near genes chr2L 14590346 intergenic not near genes chr2L_26_14590001 chr2L_14590001 RAL-913 610 chr2L 14595362 14595436 chr2L 14595516 14595559 21 138 0.5 13.5 7.0 2.6 197 chr2L 14595362 intergenic not near genes chr2L 14595460 intergenic not near genes chr2L 14595559 intergenic not near genes chr2L_21_14595001 chr2L_14595001 RAL-913 611 chr2L 14618868 14618889 chr2L 14619299 14619320 jockey 10 431 8.0 5.5 6.8 1.3 452 chr2L 14618868 intron,3` UTR,3` UTR osp -,Adh +,Adhr + chr2L 14619094 intron osp - chr2L 14619320 intron osp - chr2L_10_14615001 chr2L_14615001 RAL-913 612 chr2L 14619922 14619971 chr2L 14620193 14620257 21 285 9.5 5.0 7.2 2.6 335 chr2L 14619922 intron osp - chr2L 14620090 intron osp - chr2L 14620257 intron osp - chr2L_21_14620001 chr2L_14620001 RAL-913 613 chr2L 14642533 14642593 chr2L 14651746 14651806 roo 25 9212 10.0 11.0 10.5 2.2 9273 chr2L 14642533 intron osp - chr2L 14647170 intron osp - chr2L 14651806 intron osp - chr2L_25_14645001 chr2L_14645001 RAL-913 614 chr2L 14669762 14669829 chr2L 14669888 14669955 34 125 10.5 7.5 9.0 3.4 193 chr2L 14669762 intron osp - chr2L 14669858 intron osp - chr2L 14669955 intron osp - chr2L_34_14665001 chr2L_14665001 RAL-913 615 chr2L 14707164 14707219 chr2L 14707333 14707374 27 168 16.5 0.0 8.2 2.9 210 chr2L 14707164 intergenic not near genes chr2L 14707269 intergenic not near genes chr2L 14707374 intergenic not near genes chr2L_27_14705001 chr2L_14705001 RAL-913 616 chr2L 14768913 14768958 chr2L 14769041 14769086 8 128 0.0 13.0 6.5 1.1 173 chr2L 14768913 intergenic not near genes chr2L 14769000 intergenic not near genes chr2L 14769086 intergenic not near genes chr2L_8_14765001 chr2L_14765001 RAL-913 617 chr2L 14803835 14803899 chr2L 14809088 14809152 copia 36 5250 12.0 8.0 10.0 3.3 5317 chr2L 14803835 intergenic not near genes chr2L 14806494 intergenic not near genes chr2L 14809152 intergenic not near genes chr2L_36_14805001 chr2L_14805001 RAL-913 618 chr2L 14840930 14841008 chr2L 14841068 14841118 31 133 6.5 10.0 8.2 3.4 188 chr2L 14840930 3` UTR CR43805 - chr2L 14841024 3` UTR CR43805 - chr2L 14841118 3` UTR CR43805 - chr2L_31_14840001 chr2L_14840001 RAL-913 619 chr2L 14889907 14889982 chr2L 14890382 14890405 jockey 28 473 4.0 7.5 5.8 4.1 498 chr2L 14889907 intergenic not near genes chr2L 14890156 intergenic not near genes chr2L 14890405 intergenic not near genes chr2L_28_14890001 chr2L_14890001 RAL-913 620 chr2L 14909524 14909594 chr2L 14909652 14909721 30 125 10.0 6.0 8.0 3.3 197 chr2L 14909524 intron CG42313 - chr2L 14909622 intron CG42313 - chr2L 14909721 intron CG42313 - chr2L_30_14905001 chr2L_14905001 RAL-913 621 chr2L 14975542 14975563 chr2L 14975675 14975701 13 138 7.5 6.0 6.8 1.7 159 chr2L 14975542 intergenic mol - chr2L 14975622 intergenic mol - chr2L 14975701 intergenic mol - chr2L_13_14975001 chr2L_14975001 RAL-913 622 chr2L 14984339 14984376 chr2L 14991991 14992028 opus 20 7652 16.5 14.0 15.2 1.2 7689 chr2L 14984339 intron mol - chr2L 14988184 intron mol - chr2L 14992028 intron mol - chr2L_20_14985001 chr2L_14985001 RAL-913 623 chr2L 14984377 14984402 chr2L 14991981 14992054 opus 10 7647 11.0 10.5 10.8 0.8 7677 chr2L 14984377 intron mol - chr2L 14988216 intron mol - chr2L 14992054 intron mol - chr2L_10_14985001 chr2L_14985001 RAL-913 624 chr2L 15003498 15003568 chr2L 15003632 15003702 30 134 7.0 11.5 9.2 2.9 204 chr2L 15003498 intergenic not near genes chr2L 15003600 intergenic not near genes chr2L 15003702 intergenic not near genes chr2L_30_15000001 chr2L_15000001 RAL-913 625 chr2L 15013102 15013170 chr2L 15013256 15013329 27 154 8.0 3.0 5.5 4.2 227 chr2L 15013102 intergenic CR43856 - chr2L 15013216 intergenic not near genes chr2L 15013329 intergenic not near genes chr2L_27_15010001 chr2L_15010001 RAL-913 626 chr2L 15044667 15044703 chr2L 15044793 15044829 12 126 19.5 2.5 11.0 1.0 162 chr2L 15044667 intergenic ck - chr2L 15044748 intergenic ck - chr2L 15044829 intergenic ck - chr2L_12_15040001 chr2L_15040001 RAL-913 627 chr2L 15072294 15072308 chr2L 15072436 15072444 8 141 21.5 13.5 17.5 0.4 150 chr2L 15072294 intron vas + chr2L 15072369 exon vas + chr2L 15072444 exon vas + chr2L_8_15070001 chr2L_15070001 RAL-913 628 chr2L 15078021 15078096 chr2L 15078159 15078234 22 138 5.0 7.0 6.0 3.1 213 chr2L 15078021 intron CG15270 + chr2L 15078128 intron CG15270 + chr2L 15078234 intron CG15270 + chr2L_22_15075001 chr2L_15075001 RAL-913 629 chr2L 15080858 15080936 chr2L 15081001 15081082 30 145 8.5 3.5 6.0 4.3 224 chr2L 15080858 intron CG15270 + chr2L 15080970 intron CG15270 + chr2L 15081082 intron CG15270 + chr2L_30_15080001 chr2L_15080001 RAL-913 630 chr2L 15122726 15122805 chr2L 15122856 15122935 40 130 7.5 7.0 7.2 4.9 209 chr2L 15122726 intergenic not near genes chr2L 15122830 intergenic not near genes chr2L 15122935 intergenic not near genes chr2L_40_15120001 chr2L_15120001 RAL-913 631 chr2L 15128808 15128849 chr2L 15128938 15128979 13 128 14.5 0.0 7.2 1.6 171 chr2L 15128808 intergenic not near genes chr2L 15128894 intergenic not near genes chr2L 15128979 intergenic not near genes chr2L_13_15125001 chr2L_15125001 RAL-913 632 chr2L 15138728 15138800 chr2L 15138861 15138937 18 133 0.0 9.5 4.8 3.1 209 chr2L 15138728 intergenic not near genes chr2L 15138832 intergenic not near genes chr2L 15138937 intergenic not near genes chr2L_18_15135001 chr2L_15135001 RAL-913 633 chr2L 15163903 15163919 chr2L 15164030 15164046 5 127 8.0 0.0 4.0 1.0 143 chr2L 15163903 intron CG4168 - chr2L 15163974 intron CG4168 - chr2L 15164046 intron CG4168 - chr2L_5_15160001 chr2L_15160001 RAL-913 634 chr2L 15220191 15220456 chr2L 15220319 15220577 15 148 8.0 7.0 7.5 1.8 386 chr2L 15220191 intergenic not near genes chr2L 15220384 intergenic not near genes chr2L 15220577 intergenic not near genes chr2L_15_15220001 chr2L_15220001 RAL-913 635 chr2L 15226328 15226336 chr2L 15226454 15226462 5 126 19.5 6.5 13.0 0.4 134 chr2L 15226328 intergenic not near genes chr2L 15226395 intergenic not near genes chr2L 15226462 intergenic not near genes chr2L_5_15225001 chr2L_15225001 RAL-913 636 chr2L 15226338 15226395 chr2L 15226449 15226521 17 119 8.5 6.5 7.5 2.0 183 chr2L 15226338 intergenic not near genes chr2L 15226430 intergenic not near genes chr2L 15226521 intergenic not near genes chr2L_17_15225001 chr2L_15225001 RAL-913 637 chr2L 15332735 15332797 chr2L 15332861 15332924 30 127 9.0 11.5 10.2 2.7 189 chr2L 15332735 intergenic not near genes chr2L 15332830 intergenic not near genes chr2L 15332924 intergenic not near genes chr2L_30_15330001 chr2L_15330001 RAL-913 638 chr2L 15350855 15350925 chr2L 15350989 15351059 25 133 6.0 6.5 6.2 3.5 204 chr2L 15350855 intergenic not near genes chr2L 15350957 intergenic not near genes chr2L 15351059 intergenic not near genes chr2L_25_15350001 chr2L_15350001 RAL-913 639 chr2L 15393228 15393289 chr2L 15393369 15393430 25 141 10.5 12.5 11.5 2.0 202 chr2L 15393228 intergenic not near genes chr2L 15393329 intergenic not near genes chr2L 15393430 intergenic not near genes chr2L_25_15390001 chr2L_15390001 RAL-913 640 chr2L 15397816 15397888 chr2L 15397947 15398029 16 138 7.0 0.0 3.5 3.6 213 chr2L 15397816 intergenic not near genes chr2L 15397922 intergenic not near genes chr2L 15398029 intergenic not near genes chr2L_16_15395001 chr2L_15395001 RAL-913 641 chr2L 15403197 15403266 chr2L 15403325 15403395 12 129 7.0 0.0 3.5 2.7 198 chr2L 15403197 intergenic not near genes chr2L 15403296 intergenic not near genes chr2L 15403395 intergenic not near genes chr2L_12_15400001 chr2L_15400001 RAL-913 642 chr2L 15446004 15446076 chr2L 15453523 15453595 blood 35 7518 5.5 2.5 4.0 7.0 7591 chr2L 15446004 intergenic not near genes chr2L 15449800 intergenic not near genes chr2L 15453595 intergenic not near genes chr2L_35_15445001 chr2L_15445001 RAL-913 643 chr2L 15482530 15482594 chr2L 15482716 15482780 31 185 7.0 11.0 9.0 3.1 250 chr2L 15482530 intergenic not near genes chr2L 15482655 intergenic not near genes chr2L 15482780 intergenic not near genes chr2L_31_15480001 chr2L_15480001 RAL-913 644 chr2L 15489982 15490043 chr2L 15490137 15490209 12 165 0.0 7.0 3.5 2.7 227 chr2L 15489982 intergenic not near genes chr2L 15490096 intergenic not near genes chr2L 15490209 intergenic not near genes chr2L_12_15490001 chr2L_15490001 RAL-913 645 chr2L 15499863 15499936 chr2L 15500001 15500073 20 138 7.0 6.0 6.5 2.7 210 chr2L 15499863 intron lace + chr2L 15499968 intron lace + chr2L 15500073 intron lace + chr2L_20_15495001 chr2L_15495001 RAL-913 646 chr2L 15512137 15512203 chr2L 15512593 15512660 23 457 9.0 9.5 9.2 2.3 523 chr2L 15512137 intergenic not near genes chr2L 15512398 intergenic not near genes chr2L 15512660 intergenic not near genes chr2L_23_15510001 chr2L_15510001 RAL-913 647 chr2L 15540842 15540851 chr2L 15541006 15541015 6 164 20.5 8.0 14.2 0.4 173 chr2L 15540842 intergenic not near genes chr2L 15540928 intergenic not near genes chr2L 15541015 intergenic not near genes chr2L_6_15540001 chr2L_15540001 RAL-913 648 chr2L 15586368 15586428 chr2L 15593470 15593530 297 28 7101 11.0 8.5 9.8 2.6 7162 chr2L 15586368 intergenic not near genes chr2L 15589949 intergenic not near genes chr2L 15593530 intergenic not near genes chr2L_28_15585001 chr2L_15585001 RAL-913 649 chr2L 15598745 15598795 chr2L 15598874 15598924 17 129 7.5 0.0 3.8 3.5 179 chr2L 15598745 intergenic not near genes chr2L 15598834 intergenic not near genes chr2L 15598924 intergenic not near genes chr2L_17_15595001 chr2L_15595001 RAL-913 650 chr2L 15626346 15626385 chr2L 15626450 15626468 9 112 6.0 6.5 6.2 1.2 122 chr2L 15626346 intergenic not near genes chr2L 15626407 intergenic not near genes chr2L 15626468 intergenic not near genes chr2L_9_15625001 chr2L_15625001 RAL-913 651 chr2L 15736556 15736576 chr2L 15736817 15736837 8 261 0.0 11.0 5.5 1.2 281 chr2L 15736556 intron CycE - chr2L 15736696 intron CycE - chr2L 15736837 intron CycE - chr2L_8_15735001 chr2L_15735001 RAL-913 652 chr2L 15736579 15736608 chr2L 15736812 15736869 17 259 0.0 9.0 4.5 3.1 290 chr2L 15736579 intron CycE - chr2L 15736724 intron CycE - chr2L 15736869 intron CycE - chr2L_17_15735001 chr2L_15735001 RAL-913 653 chr2L 15751419 15751445 chr2L 15751546 15751572 13 127 12.0 18.5 15.2 0.8 153 chr2L 15751419 intergenic snRNA:U5:35D -,l(2)35Di - chr2L 15751496 intergenic snRNA:U5:35D -,l(2)35Di - chr2L 15751572 3` UTR snRNA:U5:35D - chr2L_13_15750001 chr2L_15750001 RAL-913 654 chr2L 15761038 15761042 chr2L 17030490 17030494 4 1269452 7.0 33.0 20.0 0.2 1269456 chr2L 15761038 intron Gli - chr2L 16395766 intergenic not near genes chr2L 17030494 intergenic not near genes chr2L_4_16395001 chr2L_16395001 RAL-913 655 chr2L 15761099 15761108 chr2L 15761229 15761238 4 130 0.0 17.5 8.8 0.4 139 chr2L 15761099 intron Gli - chr2L 15761168 intron Gli - chr2L 15761238 intron Gli - chr2L_4_15760001 chr2L_15760001 RAL-913 656 chr2L 15826847 15826885 chr2L 15829291 15829306 Tabor 20 2443 1.0 15.0 8.0 2.2 2459 chr2L 15826847 intergenic not near genes chr2L 15828076 intergenic not near genes chr2L 15829306 intergenic not near genes chr2L_20_15825001 chr2L_15825001 RAL-913 657 chr2L 15831303 15831376 chr2L 15831433 15831474 24 126 10.0 5.5 7.8 2.7 171 chr2L 15831303 intergenic not near genes chr2L 15831388 intergenic not near genes chr2L 15831474 intergenic not near genes chr2L_24_15830001 chr2L_15830001 RAL-913 658 chr2L 15844491 15844553 chr2L 15844618 15844641 22 113 9.5 11.0 10.2 2.0 150 chr2L 15844491 intergenic not near genes chr2L 15844566 intergenic not near genes chr2L 15844641 intergenic not near genes chr2L_22_15840001 chr2L_15840001 RAL-913 659 chr2L 15906131 15906205 chr2L 15906270 15906344 34 139 8.0 5.5 6.8 4.4 213 chr2L 15906131 intron beat-Ib - chr2L 15906238 intron beat-Ib - chr2L 15906344 exon beat-Ib - chr2L_34_15905001 chr2L_15905001 RAL-913 660 chr2L 15935144 15935219 chr2L 15935283 15935343 27 138 8.5 0.0 4.2 5.2 199 chr2L 15935144 intron beat-Ib - chr2L 15935244 intron beat-Ib - chr2L 15935343 intron beat-Ib - chr2L_27_15935001 chr2L_15935001 RAL-913 661 chr2L 15954137 15954200 chr2L 15954266 15954331 17 129 12.0 10.5 11.2 1.4 194 chr2L 15954137 intron beat-Ib - chr2L 15954234 intron beat-Ib - chr2L 15954331 intron beat-Ib - chr2L_17_15950001 chr2L_15950001 RAL-913 662 chr2L 15955983 15956044 chr2L 15957500 15957561 hobo 30 1516 8.0 9.0 8.5 3.2 1578 chr2L 15955983 intron beat-Ib - chr2L 15956772 intron beat-Ib - chr2L 15957561 intron beat-Ib - chr2L_30_15955001 chr2L_15955001 RAL-913 663 chr2L 15986528 15986546 chr2L 15986655 15986663 6 125 21.0 7.5 14.2 0.4 135 chr2L 15986528 intergenic not near genes chr2L 15986596 intergenic not near genes chr2L 15986663 intergenic not near genes chr2L_6_15985001 chr2L_15985001 RAL-913 664 chr2L 15986548 15986575 chr2L 15986651 15986677 11 118 17.5 10.5 14.0 0.7 129 chr2L 15986548 intergenic not near genes chr2L 15986612 intergenic not near genes chr2L 15986677 intergenic not near genes chr2L_11_15985001 chr2L_15985001 RAL-913 665 chr2L 16005521 16005596 chr2L 16005673 16005746 21 149 9.5 9.5 9.5 2.0 225 chr2L 16005521 intron beat-Ic + chr2L 16005634 intron beat-Ic + chr2L 16005746 intron beat-Ic + chr2L_21_16005001 chr2L_16005001 RAL-913 666 chr2L 16008656 16008677 chr2L 16008807 16008828 9 151 5.5 2.5 4.0 1.8 172 chr2L 16008656 intron beat-Ic + chr2L 16008742 intron beat-Ic + chr2L 16008828 intron beat-Ic + chr2L_9_16005001 chr2L_16005001 RAL-913 667 chr2L 16018681 16018690 chr2L 16018810 16018819 4 129 16.5 4.5 10.5 0.3 138 chr2L 16018681 intron beat-Ic + chr2L 16018750 intron beat-Ic + chr2L 16018819 intron beat-Ic + chr2L_4_16015001 chr2L_16015001 RAL-913 668 chr2L 16018692 16018699 chr2L 16018806 16018828 8 127 14.0 4.5 9.2 0.8 136 chr2L 16018692 intron beat-Ic + chr2L 16018760 intron beat-Ic + chr2L 16018828 intron beat-Ic + chr2L_8_16015001 chr2L_16015001 RAL-913 669 chr2L 16043514 16043592 chr2L 16043649 16043727 26 135 5.5 7.0 6.2 3.6 213 chr2L 16043514 intron,intron BicC +,CG45084 + chr2L 16043620 intron,intron BicC +,CG45084 + chr2L 16043727 intron,intron BicC +,CG45084 + chr2L_26_16040001 chr2L_16040001 RAL-913 670 chr2L 16051578 16051632 chr2L 16051707 16051746 13 126 1.5 10.5 6.0 1.9 168 chr2L 16051578 intron beat-Ia + chr2L 16051662 intron beat-Ia + chr2L 16051746 intron beat-Ia + chr2L_13_16050001 chr2L_16050001 RAL-913 671 chr2L 16056107 16056144 chr2L 16056233 16056270 12 126 8.0 6.0 7.0 1.5 163 chr2L 16056107 intron beat-Ia + chr2L 16056188 intron beat-Ia + chr2L 16056270 5` UTR beat-Ia + chr2L_12_16055001 chr2L_16055001 RAL-913 672 chr2L 16062239 16062256 chr2L 16062601 16062618 5 362 15.5 9.5 12.5 0.4 379 chr2L 16062239 intron beat-Ia + chr2L 16062428 intron beat-Ia + chr2L 16062618 intron beat-Ia + chr2L_5_16060001 chr2L_16060001 RAL-913 673 chr2L 16062257 16062285 chr2L 16062594 16062647 8 358 10.0 8.0 9.0 0.8 390 chr2L 16062257 intron beat-Ia + chr2L 16062452 intron beat-Ia + chr2L 16062647 intron beat-Ia + chr2L_8_16060001 chr2L_16060001 RAL-913 674 chr2L 16062297 16062308 chr2L 16062659 16062670 5 362 4.5 16.5 10.5 0.4 373 chr2L 16062297 intron beat-Ia + chr2L 16062484 intron beat-Ia + chr2L 16062670 intron beat-Ia + chr2L_5_16060001 chr2L_16060001 RAL-913 675 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 16 145889 31.0 44.0 37.5 0.4 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_16_16140001 chr2L_16140001 RAL-913 676 chr2L 16141124 16141187 chr2L 16146381 16146444 copia 21 5257 12.5 10.0 11.2 1.7 5320 chr2L 16141124 intergenic not near genes chr2L 16143784 intergenic not near genes chr2L 16146444 intergenic not near genes chr2L_21_16140001 chr2L_16140001 RAL-913 677 chr2L 16153695 16153749 chr2L 16160813 16160867 297 17 7116 11.5 8.0 9.8 1.6 7172 chr2L 16153695 intergenic not near genes chr2L 16157281 intergenic not near genes chr2L 16160867 intergenic not near genes chr2L_17_16155001 chr2L_16155001 RAL-913 678 chr2L 9084336 9084340 chr2L 16217660 16217660 11 7133321 38.0 44.0 41.0 0.3 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_11_12650001 chr2L_12650001 RAL-913 679 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 22 145889 31.0 44.0 37.5 0.6 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_22_16140001 chr2L_16140001 RAL-913 680 chr2L 16242023 16242065 chr2L 16242165 16242207 27 142 15.0 0.0 7.5 3.2 184 chr2L 16242023 5` UTR CG42818 + chr2L 16242115 exon CG42818 + chr2L 16242207 exon CG42818 + chr2L_27_16240001 chr2L_16240001 RAL-913 681 chr2L 16256725 16256729 chr2L 16256861 16256865 5 136 0.0 7.0 3.5 1.1 140 chr2L 16256725 intron PRL-1 - chr2L 16256795 intron PRL-1 - chr2L 16256865 intron PRL-1 - chr2L_5_16255001 chr2L_16255001 RAL-913 682 chr2L 16280241 16280279 chr2L 16281440 16281491 1360 18 1212 8.5 12.0 10.2 1.6 1250 chr2L 16280241 intron crp - chr2L 16280866 intron crp - chr2L 16281491 intron crp - chr2L_18_16280001 chr2L_16280001 RAL-913 683 chr2L 16354728 16354777 chr2L 16354869 16354919 18 142 5.5 9.5 7.5 2.1 191 chr2L 16354728 intergenic CaBP1 -,CG4455 + chr2L 16354824 intergenic CaBP1 -,CG4455 + chr2L 16354919 3` UTR CaBP1 - chr2L_18_16350001 chr2L_16350001 RAL-913 684 chr2L 16363912 16363975 chr2L 16364208 16364271 22 296 0.0 12.5 6.2 3.1 359 chr2L 16363912 intergenic not near genes chr2L 16364092 intergenic not near genes chr2L 16364271 intergenic not near genes chr2L_22_16360001 chr2L_16360001 RAL-913 685 chr2L 16365424 16365494 chr2L 16365624 16365708 15 200 2.0 10.0 6.0 2.1 284 chr2L 16365424 intergenic jhamt + chr2L 16365566 intergenic jhamt + chr2L 16365708 intergenic jhamt + chr2L_15_16365001 chr2L_16365001 RAL-913 686 chr2L 16375343 16375368 chr2L 16375484 16375508 7 140 19.0 0.0 9.5 0.7 165 chr2L 16375343 intergenic not near genes chr2L 16375426 intergenic not near genes chr2L 16375508 intergenic not near genes chr2L_7_16375001 chr2L_16375001 RAL-913 687 chr2L 16448919 16448962 chr2L 16449053 16449096 14 126 11.0 9.5 10.2 1.2 177 chr2L 16448919 5` UTR Idgf2 + chr2L 16449008 5` UTR Idgf2 + chr2L 16449096 5` UTR Idgf2 + chr2L_14_16445001 chr2L_16445001 RAL-913 688 chr2L 16448963 16448986 chr2L 16449052 16449078 11 112 7.0 9.5 8.2 1.2 115 chr2L 16448963 5` UTR Idgf2 + chr2L 16449020 5` UTR Idgf2 + chr2L 16449078 5` UTR Idgf2 + chr2L_11_16445001 chr2L_16445001 RAL-913 689 chr2L 16503786 16503860 chr2L 16503914 16503968 9 109 8.0 9.0 8.5 0.9 182 chr2L 16503786 intron Tpr2 + chr2L 16503877 intron Tpr2 + chr2L 16503968 intron Tpr2 + chr2L_9_16500001 chr2L_16500001 RAL-913 690 chr2L 16507888 16507966 chr2L 16508021 16508104 18 137 0.0 7.5 3.8 3.8 216 chr2L 16507888 intergenic CG5953 -,Tpr2 + chr2L 16507996 intergenic CG5953 -,Tpr2 + chr2L 16508104 3` UTR CG5953 - chr2L_18_16505001 chr2L_16505001 RAL-913 691 chr2L 16511943 16511993 chr2L 16519120 16519155 HMS-Beagle 23 7176 11.0 7.5 9.2 2.3 7212 chr2L 16511943 intron CG5953 - chr2L 16515549 intron CG5953 - chr2L 16519155 intron CG5953 - chr2L_23_16515001 chr2L_16515001 RAL-913 692 chr2L 16572165 16572193 chr2L 16572302 16572336 4 142 6.5 0.0 3.2 1.0 171 chr2L 16572165 intron CG42389 + chr2L 16572250 intron CG42389 + chr2L 16572336 intron CG42389 + chr2L_4_16570001 chr2L_16570001 RAL-913 693 chr2L 16654660 16654731 chr2L 16654803 16654854 28 140 7.5 11.5 9.5 2.7 194 chr2L 16654660 intron CG42389 + chr2L 16654757 intron CG42389 + chr2L 16654854 intron CG42389 + chr2L_28_16650001 chr2L_16650001 RAL-913 694 chr2L 16670369 16670449 chr2L 16670496 16670575 40 126 6.0 6.0 6.0 5.7 206 chr2L 16670369 intron Trpgamma - chr2L 16670472 intron Trpgamma - chr2L 16670575 intron Trpgamma - chr2L_40_16670001 chr2L_16670001 RAL-913 695 chr2L 16709027 16709102 chr2L 16709161 16709236 20 133 7.5 6.0 6.8 2.6 209 chr2L 16709027 intron CG31808 - chr2L 16709132 intron CG31808 - chr2L 16709236 intron CG31808 - chr2L_20_16705001 chr2L_16705001 RAL-913 696 chr2L 16738657 16738737 chr2L 16738900 16738945 29 232 44.0 40.0 42.0 0.7 288 chr2L 16738657 intergenic ChLD3 +,glu - chr2L 16738801 intergenic ChLD3 +,glu - chr2L 16738945 5` UTR ChLD3 + chr2L_29_16735001 chr2L_16735001 RAL-913 697 chr2L 16739068 16739128 chr2L 16742469 16742529 23 3398 33.5 41.0 37.2 0.6 3461 chr2L 16739068 exon ChLD3 + chr2L 16740798 exon ChLD3 + chr2L 16742529 3` UTR,intron ChLD3 +,LSm7 - chr2L_23_16740001 chr2L_16740001 RAL-913 698 chr2L 16736479 16736549 chr2L 16743641 16743704 20 7161 60.5 41.0 50.8 0.4 7225 chr2L 16736479 exon glu - chr2L 16740092 intron ChLD3 + chr2L 16743704 intron CG17912 + chr2L_20_16740001 chr2L_16740001 RAL-913 699 chr2L 16818780 16818812 chr2L 16818910 16818938 6 128 16.0 0.0 8.0 0.7 158 chr2L 16818780 intron,intron CG13280 -,mdy + chr2L 16818859 intron,intron CG13280 -,mdy + chr2L 16818938 intron,intron CG13280 -,mdy + chr2L_6_16815001 chr2L_16815001 RAL-913 700 chr2L 16850503 16850532 chr2L 16850650 16850679 9 147 9.5 8.0 8.8 0.9 176 chr2L 16850503 intron CG31810 - chr2L 16850591 intron CG31810 - chr2L 16850679 intron CG31810 - chr2L_9_16850001 chr2L_16850001 RAL-913 701 chr2L 16850533 16850575 chr2L 16850649 16850722 10 143 4.5 8.0 6.2 1.4 189 chr2L 16850533 intron CG31810 - chr2L 16850628 intron CG31810 - chr2L 16850722 intron CG31810 - chr2L_10_16850001 chr2L_16850001 RAL-913 702 chr2L 16866976 16867033 chr2L 16867121 16867178 28 145 7.0 8.5 7.8 3.2 202 chr2L 16866976 intergenic not near genes chr2L 16867077 intergenic not near genes chr2L 16867178 intergenic not near genes chr2L_28_16865001 chr2L_16865001 RAL-913 703 chr2L 16873225 16873288 chr2L 16873347 16873415 7 126 0.0 0.0 0.0 7.0 190 chr2L 16873225 intron CR31781 + chr2L 16873320 intron CR31781 + chr2L 16873415 intron CR31781 + chr2L_7_16870001 chr2L_16870001 RAL-913 704 chr2L 16880812 16880845 chr2L 16880944 16880977 16 132 7.5 9.0 8.2 1.7 165 chr2L 16880812 intron,intron CG31743 +,CG34313 + chr2L 16880894 intron,intron CG31743 +,CG34313 + chr2L 16880977 intron,intron CG31743 +,CG34313 + chr2L_16_16880001 chr2L_16880001 RAL-913 705 chr2L 16927429 16927469 chr2L 16927568 16927611 12 132 19.5 6.0 12.8 0.9 182 chr2L 16927429 intergenic not near genes chr2L 16927520 intergenic not near genes chr2L 16927611 intergenic not near genes chr2L_12_16925001 chr2L_16925001 RAL-913 706 chr2L 16927474 16927498 chr2L 16927565 16927601 9 105 12.5 5.5 9.0 0.9 127 chr2L 16927474 intergenic not near genes chr2L 16927538 intergenic not near genes chr2L 16927601 intergenic not near genes chr2L_9_16925001 chr2L_16925001 RAL-913 707 chr2L 16958062 16958125 chr2L 16962900 16962963 Doc 34 4838 9.0 7.0 8.0 3.8 4901 chr2L 16958062 intergenic not near genes chr2L 16960512 intergenic not near genes chr2L 16962963 intergenic not near genes chr2L_34_16960001 chr2L_16960001 RAL-913 708 chr2L 17000082 17000145 chr2L 17000254 17000317 17 170 7.5 9.5 8.5 1.8 235 chr2L 17000082 intergenic not near genes chr2L 17000200 intergenic not near genes chr2L 17000317 intergenic not near genes chr2L_17_17000001 chr2L_17000001 RAL-913 709 chr2L 17101851 17101914 chr2L 17101978 17102041 16 126 10.5 7.5 9.0 1.6 190 chr2L 17101851 intergenic not near genes chr2L 17101946 intergenic not near genes chr2L 17102041 intergenic not near genes chr2L_16_17100001 chr2L_17100001 RAL-913 710 chr2L 17102963 17103030 chr2L 17103101 17103168 22 138 12.5 12.5 12.5 1.6 205 chr2L 17102963 intergenic not near genes chr2L 17103066 intergenic not near genes chr2L 17103168 intergenic not near genes chr2L_22_17100001 chr2L_17100001 RAL-913 711 chr2L 17126309 17126321 chr2L 17126419 17126441 4 119 16.5 14.5 15.5 0.2 132 chr2L 17126309 intergenic CG31784 - chr2L 17126375 intergenic CG31784 - chr2L 17126441 intergenic CG31784 - chr2L_4_17125001 chr2L_17125001 RAL-913 712 chr2L 17126326 17126359 chr2L 17126409 17126411 13 91 9.5 13.0 11.2 1.1 85 chr2L 17126326 intergenic CG31784 - chr2L 17126368 intergenic CG31784 - chr2L 17126411 intergenic CG31784 - chr2L_13_17125001 chr2L_17125001 RAL-913 713 chr2L 17158702 17158740 chr2L 17158855 17158893 7 153 28.5 33.0 30.8 0.2 191 chr2L 17158702 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158798 intron,intron CG34106 +,beat-IIIa + chr2L 17158893 intron,intron CG34106 +,beat-IIIa + chr2L_7_17155001 chr2L_17155001 RAL-913 714 chr2L 17167523 17167586 chr2L 17167814 17167876 pogo 11 290 2.5 6.0 4.2 2.1 353 chr2L 17167523 intron,intron CG34106 +,beat-IIIa + chr2L 17167700 intron,intron CG34106 +,beat-IIIa + chr2L 17167876 intron,intron CG34106 +,beat-IIIa + chr2L_11_17165001 chr2L_17165001 RAL-913 715 chr2L 17168147 17168224 chr2L 17168975 17169052 26 826 12.5 13.0 12.8 1.9 905 chr2L 17168147 intron,intron CG34106 +,beat-IIIa + chr2L 17168600 intron,intron CG34106 +,beat-IIIa + chr2L 17169052 intron,intron CG34106 +,beat-IIIa + chr2L_26_17165001 chr2L_17165001 RAL-913 716 chr2L 17199131 17199182 chr2L 17200648 17200699 hobo 19 1517 8.0 8.0 8.0 2.1 1568 chr2L 17199131 intron beat-IIIc - chr2L 17199915 intron beat-IIIc - chr2L 17200699 intron beat-IIIc - chr2L_19_17195001 chr2L_17195001 RAL-913 717 chr2L 17260845 17260856 chr2L 17260972 17260989 4 132 15.0 6.5 10.8 0.3 144 chr2L 17260845 intergenic beat-IIIc - chr2L 17260917 intergenic beat-IIIc - chr2L 17260989 intergenic beat-IIIc - chr2L_4_17260001 chr2L_17260001 RAL-913 718 chr2L 17273150 17273216 chr2L 17277983 17278049 F-element 21 4832 11.0 6.0 8.5 2.2 4899 chr2L 17273150 intergenic not near genes chr2L 17275600 intergenic not near genes chr2L 17278049 intergenic not near genes chr2L_21_17275001 chr2L_17275001 RAL-913 719 chr2L 17286990 17287245 chr2L 17287140 17287352 5 134 3.0 3.0 3.0 1.2 362 chr2L 17286990 exon CG15140 + chr2L 17287171 exon CG15140 + chr2L 17287352 exon CG15140 + chr2L_5_17285001 chr2L_17285001 RAL-913 720 chr2L 17303419 17303460 chr2L 17303637 17303687 5 226 30.0 29.0 29.5 0.2 268 chr2L 17303419 intergenic not near genes chr2L 17303553 intergenic not near genes chr2L 17303687 intergenic not near genes chr2L_5_17300001 chr2L_17300001 RAL-913 721 chr2L 17327864 17327928 chr2L 17328000 17328053 26 133 10.0 9.0 9.5 2.5 189 chr2L 17327864 intergenic not near genes chr2L 17327958 intergenic not near genes chr2L 17328053 intergenic not near genes chr2L_26_17325001 chr2L_17325001 RAL-913 722 chr2L 17351903 17351931 chr2L 17352055 17352083 4 152 16.0 1.0 8.5 0.4 180 chr2L 17351903 intergenic not near genes chr2L 17351993 intergenic not near genes chr2L 17352083 intergenic not near genes chr2L_4_17350001 chr2L_17350001 RAL-913 723 chr2L 17359980 17359988 chr2L 17360208 17360216 4 228 34.5 9.5 22.0 0.2 236 chr2L 17359980 intergenic not near genes chr2L 17360098 intergenic not near genes chr2L 17360216 intergenic not near genes chr2L_4_17360001 chr2L_17360001 RAL-913 724 chr2L 17362658 17362704 chr2L 17362784 17362803 15 124 16.0 4.0 10.0 1.4 145 chr2L 17362658 intergenic not near genes chr2L 17362730 intergenic not near genes chr2L 17362803 intergenic not near genes chr2L_15_17360001 chr2L_17360001 RAL-913 725 chr2L 17375745 17375814 chr2L 17375910 17375979 22 164 14.0 12.0 13.0 1.6 234 chr2L 17375745 intron Lrch - chr2L 17375862 intron Lrch - chr2L 17375979 intron Lrch - chr2L_22_17375001 chr2L_17375001 RAL-913 726 chr2L 17379669 17379697 chr2L 17379803 17379831 19 134 8.0 8.5 8.2 2.1 162 chr2L 17379669 intron Lrch - chr2L 17379750 intron Lrch - chr2L 17379831 intron Lrch - chr2L_19_17375001 chr2L_17375001 RAL-913 727 chr2L 17388551 17388563 chr2L 17388677 17388689 4 126 6.0 4.5 5.2 0.6 138 chr2L 17388551 intron CLIP-190 + chr2L 17388620 intron CLIP-190 + chr2L 17388689 intron CLIP-190 + chr2L_4_17385001 chr2L_17385001 RAL-913 728 chr2L 17397997 17398022 chr2L 17398137 17398162 5 140 19.0 33.0 26.0 0.2 165 chr2L 17397997 intron CLIP-190 + chr2L 17398080 intron CLIP-190 + chr2L 17398162 intron CLIP-190 + chr2L_5_17395001 chr2L_17395001 RAL-913 729 chr2L 17424663 17424735 chr2L 17424820 17424864 11 159 19.5 14.0 16.8 0.6 201 chr2L 17424663 intron Dif - chr2L 17424764 intron Dif - chr2L 17424864 intron Dif - chr2L_11_17420001 chr2L_17420001 RAL-913 730 chr2L 17432024 17432044 chr2L 17432181 17432201 1360 13 157 0.0 22.5 11.2 1.1 177 chr2L 17432024 intron Dif - chr2L 17432112 intron Dif - chr2L 17432201 intron Dif - chr2L_13_17430001 chr2L_17430001 RAL-913 731 chr2L 17533390 17533442 chr2L 17533527 17533579 15 137 7.0 4.5 5.8 2.2 189 chr2L 17533390 intergenic not near genes chr2L 17533484 intergenic not near genes chr2L 17533579 intergenic not near genes chr2L_15_17530001 chr2L_17530001 RAL-913 732 chr2L 17577684 17577738 chr2L 17577810 17577864 26 126 12.0 11.5 11.8 2.0 180 chr2L 17577684 intergenic not near genes chr2L 17577774 intergenic not near genes chr2L 17577864 intergenic not near genes chr2L_26_17575001 chr2L_17575001 RAL-913 733 chr2L 17607439 17607476 chr2L 17607587 17607624 6 148 10.5 0.5 5.5 0.9 185 chr2L 17607439 intergenic CR44412 - chr2L 17607532 intergenic CR44412 - chr2L 17607624 intergenic CR44412 - chr2L_6_17605001 chr2L_17605001 RAL-913 734 chr2L 17631740 17631743 chr2L 19689115 19689118 5 2057375 19.0 32.0 25.5 0.2 2057378 chr2L 17631740 intergenic not near genes chr2L 18660429 exon MESR3 + chr2L 19689118 intron Lar + chr2L_5_18660001 chr2L_18660001 RAL-913 735 chr2L 17637058 17637187 chr2L 17637185 17637322 26 128 10.5 8.0 9.2 2.5 264 chr2L 17637058 intergenic not near genes chr2L 17637190 intergenic not near genes chr2L 17637322 intergenic not near genes chr2L_26_17635001 chr2L_17635001 RAL-913 736 chr2L 17643302 17643358 chr2L 17643638 17643694 5 335 28.5 21.5 25.0 0.2 392 chr2L 17643302 intergenic not near genes chr2L 17643498 intergenic not near genes chr2L 17643694 intergenic not near genes chr2L_5_17640001 chr2L_17640001 RAL-913 737 chr2L 17669067 17669121 chr2L 17669194 17669248 11 124 25.5 25.5 25.5 0.4 181 chr2L 17669067 intron CadN - chr2L 17669158 intron CadN - chr2L 17669248 intron CadN - chr2L_11_17665001 chr2L_17665001 RAL-913 738 chr2L 17684964 17684975 chr2L 17685125 17685136 6 161 11.0 23.0 17.0 0.3 172 chr2L 17684964 intron CadN - chr2L 17685050 intron CadN - chr2L 17685136 intron CadN - chr2L_6_17685001 chr2L_17685001 RAL-913 739 chr2L 17687471 17687521 chr2L 17692266 17692316 F-element 15 4795 2.0 6.0 4.0 3.0 4845 chr2L 17687471 intron CadN - chr2L 17689894 intron CadN - chr2L 17692316 intron CadN - chr2L_15_17685001 chr2L_17685001 RAL-913 740 chr2L 17723744 17723802 chr2L 17723887 17723945 22 143 14.0 11.0 12.5 1.6 201 chr2L 17723744 intron CadN - chr2L 17723844 intron CadN - chr2L 17723945 intron CadN - chr2L_22_17720001 chr2L_17720001 RAL-913 741 chr2L 17727725 17727783 chr2L 17729464 17729522 hobo 18 1738 7.0 12.0 9.5 1.7 1797 chr2L 17727725 intron CadN - chr2L 17728624 intron CadN - chr2L 17729522 intron CadN - chr2L_18_17725001 chr2L_17725001 RAL-913 742 chr2L 17741706 17741768 chr2L 17741840 17741903 4 133 35.0 33.5 34.2 0.1 197 chr2L 17741706 intron CadN - chr2L 17741804 intron CadN - chr2L 17741903 intron CadN - chr2L_4_17740001 chr2L_17740001 RAL-913 743 chr2L 17745922 17745974 chr2L 17747372 17747424 6 1450 26.0 28.5 27.2 0.2 1502 chr2L 17745922 intron CadN - chr2L 17746673 intron CadN - chr2L 17747424 intron CadN - chr2L_6_17745001 chr2L_17745001 RAL-913 744 chr2L 17795975 17796045 chr2L 17796106 17796176 24 131 7.5 6.0 6.8 3.1 201 chr2L 17795975 intron CadN2 - chr2L 17796076 intron CadN2 - chr2L 17796176 intron CadN2 - chr2L_24_17795001 chr2L_17795001 RAL-913 745 chr2L 17813706 17813728 chr2L 17813839 17813861 13 132 11.0 5.0 8.0 1.4 155 chr2L 17813706 intron CadN2 - chr2L 17813784 intron CadN2 - chr2L 17813861 intron CadN2 - chr2L_13_17810001 chr2L_17810001 RAL-913 746 chr2L 17819879 17819943 chr2L 17825132 17825196 copia 23 5252 10.0 10.0 10.0 2.1 5317 chr2L 17819879 intron CadN2 - chr2L 17822538 intron CadN2 - chr2L 17825196 intron CadN2 - chr2L_23_17820001 chr2L_17820001 RAL-913 747 chr2L 17863591 17863628 chr2L 17863796 17863833 11 204 4.5 2.5 3.5 2.4 242 chr2L 17863591 intron CadN2 - chr2L 17863712 intron CadN2 - chr2L 17863833 intron CadN2 - chr2L_11_17860001 chr2L_17860001 RAL-913 748 chr2L 17879971 17880029 chr2L 17880108 17880166 15 134 7.0 10.5 8.8 1.5 195 chr2L 17879971 intergenic not near genes chr2L 17880068 intergenic not near genes chr2L 17880166 intergenic not near genes chr2L_15_17880001 chr2L_17880001 RAL-913 749 chr2L 17911917 17911931 chr2L 17914145 17914159 pogo 7 2228 17.0 8.0 12.5 0.5 2242 chr2L 17911917 intergenic not near genes chr2L 17913038 intergenic not near genes chr2L 17914159 intergenic CG43271 - chr2L_7_17910001 chr2L_17910001 RAL-913 750 chr2L 17911932 17911979 chr2L 17914141 17914207 pogo 12 2226 13.5 8.0 10.8 1.0 2275 chr2L 17911932 intergenic not near genes chr2L 17913070 intergenic not near genes chr2L 17914207 intergenic CG43271 - chr2L_12_17910001 chr2L_17910001 RAL-913 751 chr2L 17938647 17938723 chr2L 17938783 17938859 21 135 8.5 12.0 10.2 1.9 212 chr2L 17938647 intergenic CR44399 - chr2L 17938753 intergenic CR44399 - chr2L 17938859 intergenic CR44399 - chr2L_21_17935001 chr2L_17935001 RAL-913 752 chr2L 17941802 17941875 chr2L 17941936 17941989 31 131 10.0 11.0 10.5 2.7 187 chr2L 17941802 intergenic not near genes chr2L 17941896 intergenic not near genes chr2L 17941989 intergenic not near genes chr2L_31_17940001 chr2L_17940001 RAL-913 753 chr2L 17943851 17944142 chr2L 17944004 17944230 42 136 8.5 15.5 12.0 3.2 379 chr2L 17943851 intergenic not near genes chr2L 17944040 intergenic not near genes chr2L 17944230 intergenic not near genes chr2L_42_17940001 chr2L_17940001 RAL-913 754 chr2L 17951903 17951967 chr2L 17953420 17953484 hobo 35 1516 11.5 10.5 11.0 2.9 1581 chr2L 17951903 intergenic CR44398 -,CR44397 - chr2L 17952694 intergenic not near genes chr2L 17953484 intergenic not near genes chr2L_35_17950001 chr2L_17950001 RAL-913 755 chr2L 18051832 18051850 chr2L 18061029 18061037 roo 12 9195 22.0 8.0 15.0 0.8 9205 chr2L 18051832 intron rdo + chr2L 18056434 intron rdo + chr2L 18061037 intron rdo + chr2L_12_18055001 chr2L_18055001 RAL-913 756 chr2L 18051857 18051897 chr2L 18061028 18061094 roo 18 9194 12.0 8.0 10.0 1.6 9237 chr2L 18051857 intron rdo + chr2L 18056476 intron rdo + chr2L 18061094 intron rdo + chr2L_18_18055001 chr2L_18055001 RAL-913 757 chr2L 18090631 18090695 chr2L 18090769 18090833 17 137 13.5 16.0 14.8 1.1 202 chr2L 18090631 intergenic CG15153 - chr2L 18090732 intergenic CG15153 - chr2L 18090833 3` UTR CG15153 - chr2L_17_18090001 chr2L_18090001 RAL-913 758 chr2L 18111198 18111212 chr2L 18111339 18111353 10 140 19.5 9.5 14.5 0.6 155 chr2L 18111198 intergenic not near genes chr2L 18111276 intergenic not near genes chr2L 18111353 intergenic not near genes chr2L_10_18110001 chr2L_18110001 RAL-913 759 chr2L 18145196 18145270 chr2L 18145325 18145362 21 127 14.0 12.0 13.0 1.5 166 chr2L 18145196 intron,5` UTR Socs36E -,CR44478 + chr2L 18145279 intron,5` UTR Socs36E -,CR44478 + chr2L 18145362 intron,5` UTR Socs36E -,CR44478 + chr2L_21_18145001 chr2L_18145001 RAL-913 760 chr2L 18145977 18146028 chr2L 18146115 18146166 8 137 27.5 32.5 30.0 0.3 189 chr2L 18145977 intron Socs36E - chr2L 18146072 intron Socs36E - chr2L 18146166 intron Socs36E - chr2L_8_18145001 chr2L_18145001 RAL-913 761 chr2L 18184953 18185025 chr2L 18185121 18185193 15 168 14.5 10.5 12.5 1.1 240 chr2L 18184953 intron,5` UTR CG42750 -,CG7180 - chr2L 18185073 intron CG42750 - chr2L 18185193 intron,3` UTR CG42750 -,CR44900 - chr2L_15_18185001 chr2L_18185001 RAL-913 762 chr2L 18210187 18210243 chr2L 18210332 18210388 11 145 4.5 9.0 6.8 1.4 201 chr2L 18210187 intron CG42750 - chr2L 18210288 intron CG42750 - chr2L 18210388 intron CG42750 - chr2L_11_18210001 chr2L_18210001 RAL-913 763 chr2L 18214424 18214471 chr2L 18214700 18214741 14 269 3.0 10.5 6.8 1.8 317 chr2L 18214424 intron CG42750 - chr2L 18214582 intron CG42750 - chr2L 18214741 intron CG42750 - chr2L_14_18210001 chr2L_18210001 RAL-913 764 chr2L 18218570 18218631 chr2L 18218708 18218767 17 138 0.0 5.0 2.5 4.9 197 chr2L 18218570 intron CG42750 - chr2L 18218668 intron CG42750 - chr2L 18218767 intron CG42750 - chr2L_17_18215001 chr2L_18215001 RAL-913 765 chr2L 18221574 18221649 chr2L 18221701 18221777 21 127 3.5 6.5 5.0 3.5 203 chr2L 18221574 intron CG42750 - chr2L 18221676 intron CG42750 - chr2L 18221777 intron CG42750 - chr2L_21_18220001 chr2L_18220001 RAL-913 766 chr2L 18239917 18239990 chr2L 18240050 18240123 28 132 4.0 2.0 3.0 7.0 206 chr2L 18239917 intron CG42750 - chr2L 18240020 intron CG42750 - chr2L 18240123 intron CG42750 - chr2L_28_18240001 chr2L_18240001 RAL-913 767 chr2L 18243331 18243359 chr2L 18243458 18243486 13 127 9.5 11.0 10.2 1.2 155 chr2L 18243331 intron CG42750 - chr2L 18243408 intron CG42750 - chr2L 18243486 intron CG42750 - chr2L_13_18240001 chr2L_18240001 RAL-913 768 chr2L 18250522 18250535 chr2L 18250684 18250695 9 162 12.5 7.5 10.0 0.8 173 chr2L 18250522 intron CG42750 - chr2L 18250608 intron CG42750 - chr2L 18250695 intron CG42750 - chr2L_9_18250001 chr2L_18250001 RAL-913 769 chr2L 18306743 18306791 chr2L 18307122 18307198 21 404 12.5 14.5 13.5 1.4 455 chr2L 18306743 intergenic not near genes chr2L 18306970 intergenic not near genes chr2L 18307198 intergenic not near genes chr2L_21_18305001 chr2L_18305001 RAL-913 770 chr2L 18309435 18309511 chr2L 18309631 18309707 37 196 8.0 7.0 7.5 4.4 272 chr2L 18309435 5` UTR CG43354 - chr2L 18309571 intergenic CR44694 +,CG43354 - chr2L 18309707 5` UTR CR44694 + chr2L_37_18305001 chr2L_18305001 RAL-913 771 chr2L 18334573 18334637 chr2L 18334708 18334772 24 135 9.5 12.0 10.8 2.0 199 chr2L 18334573 intron Fas3 + chr2L 18334672 intron Fas3 + chr2L 18334772 intron Fas3 + chr2L_24_18330001 chr2L_18330001 RAL-913 772 chr2L 18393953 18394006 chr2L 18394083 18394136 5 127 33.0 36.5 34.8 0.1 183 chr2L 18393953 intergenic not near genes chr2L 18394044 intergenic not near genes chr2L 18394136 intergenic not near genes chr2L_5_18390001 chr2L_18390001 RAL-913 773 chr2L 18407984 18408060 chr2L 18412818 18412902 Doc 22 4838 8.5 0.0 4.2 4.2 4918 chr2L 18407984 intergenic not near genes chr2L 18410443 intergenic not near genes chr2L 18412902 intergenic not near genes chr2L_22_18410001 chr2L_18410001 RAL-913 774 chr2L 18423803 18423870 chr2L 18423944 18424011 20 141 13.5 14.0 13.8 1.4 208 chr2L 18423803 intergenic not near genes chr2L 18423907 intergenic not near genes chr2L 18424011 intergenic not near genes chr2L_20_18420001 chr2L_18420001 RAL-913 775 chr2L 18441108 18441169 chr2L 18441298 18441357 23 190 2.5 10.5 6.5 3.1 249 chr2L 18441108 intergenic RpS26 - chr2L 18441232 intergenic RpS26 - chr2L 18441357 3` UTR RpS26 - chr2L_23_18440001 chr2L_18440001 RAL-913 776 chr2L 18443335 18443569 chr2L 18443470 18443736 4 143 40.5 37.0 38.8 0.1 401 chr2L 18443335 intergenic RpS26 - chr2L 18443536 intergenic RpS26 - chr2L 18443736 intergenic not near genes chr2L_4_18440001 chr2L_18440001 RAL-913 777 chr2L 18496419 18496441 chr2L 18496609 18496635 4 198 31.5 36.5 34.0 0.1 216 chr2L 18496419 intron kon - chr2L 18496527 intron kon - chr2L 18496635 intron kon - chr2L_4_18495001 chr2L_18495001 RAL-913 778 chr2L 18525456 18525528 chr2L 18525702 18525774 30 244 11.5 18.0 14.8 1.9 318 chr2L 18525456 intron CG10211 + chr2L 18525615 intron CG10211 + chr2L 18525774 intron CG10211 + chr2L_30_18525001 chr2L_18525001 RAL-913 779 chr2L 18520742 18520811 chr2L 18525677 18525746 7 4935 48.5 13.5 31.0 0.2 5004 chr2L 18520742 intron CG10211 + chr2L 18523244 intron CG10211 + chr2L 18525746 intron CG10211 + chr2L_7_18520001 chr2L_18520001 RAL-913 780 chr2L 18541684 18541756 chr2L 18541810 18541882 26 125 11.5 11.0 11.2 2.1 198 chr2L 18541684 intron Pde11 - chr2L 18541783 intron Pde11 - chr2L 18541882 exon Pde11 - chr2L_26_18540001 chr2L_18540001 RAL-913 781 chr2L 18575579 18575592 chr2L 18575726 18575733 5 146 14.0 0.0 7.0 0.6 154 chr2L 18575579 intron Pde11 - chr2L 18575656 intron Pde11 - chr2L 18575733 intron Pde11 - chr2L_5_18575001 chr2L_18575001 RAL-913 782 chr2L 18577240 18577302 chr2L 18577458 18577525 8 218 31.0 34.0 32.5 0.2 285 chr2L 18577240 intron Pde11 - chr2L 18577382 intron Pde11 - chr2L 18577525 intron Pde11 - chr2L_8_18575001 chr2L_18575001 RAL-913 783 chr2L 18622681 18622712 chr2L 18622811 18622842 5 130 30.0 36.0 33.0 0.1 161 chr2L 18622681 intron MESR3 + chr2L 18622762 intron MESR3 + chr2L 18622842 intron MESR3 + chr2L_5_18620001 chr2L_18620001 RAL-913 784 chr2L 18629325 18629374 chr2L 18629460 18629504 4 132 14.0 19.5 16.8 0.2 179 chr2L 18629325 intron MESR3 + chr2L 18629414 intron MESR3 + chr2L 18629504 intron MESR3 + chr2L_4_18625001 chr2L_18625001 RAL-913 785 chr2L 18745095 18745166 chr2L 18745232 18745303 18 135 8.5 12.0 10.2 1.6 208 chr2L 18745095 intergenic not near genes chr2L 18745199 intergenic not near genes chr2L 18745303 intergenic not near genes chr2L_18_18745001 chr2L_18745001 RAL-913 786 chr2L 18811382 18811431 chr2L 18811514 18811563 32 131 12.5 9.0 10.8 2.7 181 chr2L 18811382 intergenic CG10570 -,CG42502 - chr2L 18811472 intergenic CG10570 -,CG42502 - chr2L 18811563 intergenic not near genes chr2L_32_18810001 chr2L_18810001 RAL-913 787 chr2L 18811623 18811688 chr2L 18811882 18811947 7 258 38.5 39.5 39.0 0.2 324 chr2L 18811623 intergenic not near genes chr2L 18811785 intergenic not near genes chr2L 18811947 intergenic not near genes chr2L_7_18810001 chr2L_18810001 RAL-913 788 chr2L 18812516 18812583 chr2L 18812829 18812896 34 313 0.0 10.5 5.2 5.5 380 chr2L 18812516 intergenic CG17325 +,CG42305 + chr2L 18812706 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812896 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_34_18810001 chr2L_18810001 RAL-913 789 chr2L 18847875 18847908 chr2L 18848336 18848369 4 460 23.5 29.5 26.5 0.1 494 chr2L 18847875 intron CG17321 + chr2L 18848122 intron CG17321 + chr2L 18848369 intron CG17321 + chr2L_4_18845001 chr2L_18845001 RAL-913 790 chr2L 18871345 18871363 chr2L 18871456 18871475 4 118 11.5 8.0 9.8 0.4 130 chr2L 18871345 intron tup - chr2L 18871410 intron tup - chr2L 18871475 intron tup - chr2L_4_18870001 chr2L_18870001 RAL-913 791 chr2L 18876818 18876879 chr2L 18876945 18877007 32 128 9.5 8.0 8.8 3.3 189 chr2L 18876818 intron tup - chr2L 18876912 intron tup - chr2L 18877007 intron tup - chr2L_32_18875001 chr2L_18875001 RAL-913 792 chr2L 18884734 18884783 chr2L 18884865 18884917 12 130 11.0 11.0 11.0 1.0 183 chr2L 18884734 intergenic not near genes chr2L 18884826 intergenic not near genes chr2L 18884917 intergenic not near genes chr2L_12_18880001 chr2L_18880001 RAL-913 793 chr2L 18902589 18902619 chr2L 18902920 18902950 17 331 20.0 16.0 18.0 0.9 361 chr2L 18902589 intergenic not near genes chr2L 18902770 intergenic not near genes chr2L 18902950 intergenic not near genes chr2L_17_18900001 chr2L_18900001 RAL-913 794 chr2L 18902627 18902650 chr2L 18902919 18902981 12 328 14.0 15.5 14.8 0.8 354 chr2L 18902627 intergenic not near genes chr2L 18902804 intergenic not near genes chr2L 18902981 intergenic not near genes chr2L_12_18900001 chr2L_18900001 RAL-913 795 chr2L 19051584 19051601 chr2L 19051765 19051782 7 181 23.0 18.5 20.8 0.3 198 chr2L 19051584 5` UTR l(2)37Bb - chr2L 19051683 intergenic l(2)37Bb -,Rpn3 + chr2L 19051782 intergenic Rpn3 +,l(2)37Bb - chr2L_7_19050001 chr2L_19050001 RAL-913 796 chr2L 19077270 19077296 chr2L 19078761 19078787 4 1491 36.5 31.0 33.8 0.1 1517 chr2L 19077270 intergenic CG10700 - chr2L 19078028 exon CG10700 - chr2L 19078787 exon CG10700 - chr2L_4_19075001 chr2L_19075001 RAL-913 797 chr2L 19121854 19121898 chr2L 19122001 19122045 16 147 8.0 13.5 10.8 1.4 191 chr2L 19121854 3` UTR l(2)37Cc - chr2L 19121950 3` UTR l(2)37Cc - chr2L 19122045 3` UTR l(2)37Cc - chr2L_16_19120001 chr2L_19120001 RAL-913 798 chr2L 19147334 19147342 chr2L 19154404 19154427 297 6 7082 22.5 6.5 14.5 0.4 7093 chr2L 19147334 intron brat + chr2L 19150880 intron brat + chr2L 19154427 intron brat + chr2L_6_19150001 chr2L_19150001 RAL-913 799 chr2L 19147343 19147391 chr2L 19154403 19154476 297 30 7081 10.0 6.5 8.2 3.3 7133 chr2L 19147343 intron brat + chr2L 19150910 intron brat + chr2L 19154476 intron brat + chr2L_30_19150001 chr2L_19150001 RAL-913 800 chr2L 19241035 19241087 chr2L 19241163 19241215 20 126 14.0 18.5 16.2 1.2 180 chr2L 19241035 intergenic not near genes chr2L 19241125 intergenic not near genes chr2L 19241215 intergenic not near genes chr2L_20_19240001 chr2L_19240001 RAL-913 801 chr2L 19246796 19246849 chr2L 19246926 19246979 4 130 48.5 47.0 47.8 0.1 183 chr2L 19246796 intergenic not near genes chr2L 19246888 intergenic not near genes chr2L 19246979 intergenic not near genes chr2L_4_19245001 chr2L_19245001 RAL-913 802 chr2L 19305561 19305633 chr2L 19305717 19305789 24 153 9.5 11.0 10.2 2.1 228 chr2L 19305561 intergenic not near genes chr2L 19305675 intergenic not near genes chr2L 19305789 intergenic not near genes chr2L_24_19305001 chr2L_19305001 RAL-913 803 chr2L 19309576 19309646 chr2L 19309706 19309776 34 128 16.0 11.0 13.5 2.3 200 chr2L 19309576 intergenic not near genes chr2L 19309676 intergenic not near genes chr2L 19309776 intergenic not near genes chr2L_34_19305001 chr2L_19305001 RAL-913 804 chr2L 19316154 19316219 chr2L 19316281 19316339 15 126 8.0 11.5 9.8 1.4 185 chr2L 19316154 intergenic not near genes chr2L 19316246 intergenic not near genes chr2L 19316339 intergenic not near genes chr2L_15_19315001 chr2L_19315001 RAL-913 805 chr2L 19331643 19331694 chr2L 19331747 19331750 14 110 10.0 10.5 10.2 1.2 107 chr2L 19331643 intergenic not near genes chr2L 19331696 intergenic not near genes chr2L 19331750 intergenic not near genes chr2L_14_19330001 chr2L_19330001 RAL-913 806 chr2L 19340174 19340227 chr2L 19340275 19340345 13 116 14.0 15.0 14.5 0.8 171 chr2L 19340174 exon dnt - chr2L 19340260 exon dnt - chr2L 19340345 exon dnt - chr2L_13_19340001 chr2L_19340001 RAL-913 807 chr2L 19344973 19345037 chr2L 19357232 19357291 blood 23 12259 8.5 8.5 8.5 2.4 12318 chr2L 19344973 intron dnt - chr2L 19351132 intron dnt - chr2L 19357291 intron dnt - chr2L_23_19350001 chr2L_19350001 RAL-913 808 chr2L 19357498 19357566 chr2L 19357638 19357696 32 139 7.5 9.5 8.5 3.4 198 chr2L 19357498 intron dnt - chr2L 19357597 intron dnt - chr2L 19357696 intron dnt - chr2L_32_19355001 chr2L_19355001 RAL-913 809 chr2L 19364040 19364076 chr2L 19364170 19364206 6 130 1.5 3.5 2.5 1.7 166 chr2L 19364040 intergenic CG13086 + chr2L 19364123 intergenic CG13086 + chr2L 19364206 intergenic CG13086 + chr2L_6_19360001 chr2L_19360001 RAL-913 810 chr2L 19378299 19378365 chr2L 19378432 19378498 26 131 12.0 15.0 13.5 1.8 199 chr2L 19378299 intergenic not near genes chr2L 19378398 intergenic not near genes chr2L 19378498 intergenic not near genes chr2L_26_19375001 chr2L_19375001 RAL-913 811 chr2L 19379161 19379237 chr2L 19379351 19379427 5 190 40.5 33.5 37.0 0.1 266 chr2L 19379161 intergenic not near genes chr2L 19379294 intergenic not near genes chr2L 19379427 intergenic not near genes chr2L_5_19375001 chr2L_19375001 RAL-913 812 chr2L 19383956 19384006 chr2L 19384107 19384150 12 143 10.0 12.0 11.0 1.0 194 chr2L 19383956 exon fon - chr2L 19384053 exon fon - chr2L 19384150 exon fon - chr2L_12_19380001 chr2L_19380001 RAL-913 813 chr2L 19405424 19405707 chr2L 19405707 19405940 7 174 1.0 1.0 1.0 3.5 516 chr2L 19405424 intron Pax - chr2L 19405682 intron Pax - chr2L 19405940 intron Pax - chr2L_7_19405001 chr2L_19405001 RAL-913 814 chr2L 19441017 19441085 chr2L 19441144 19441212 31 127 17.5 13.5 15.5 1.9 195 chr2L 19441017 intron CG10237 - chr2L 19441114 intron CG10237 - chr2L 19441212 5` UTR CG10237 - chr2L_31_19440001 chr2L_19440001 RAL-913 815 chr2L 19466783 19466806 chr2L 19466912 19466935 15 129 17.0 12.5 14.8 0.9 152 chr2L 19466783 3` UTR tj + chr2L 19466859 3` UTR tj + chr2L 19466935 3` UTR tj + chr2L_15_19465001 chr2L_19465001 RAL-913 816 chr2L 19486843 19486897 chr2L 19486972 19487026 16 128 12.0 14.0 13.0 1.1 183 chr2L 19486843 intergenic CG13084 + chr2L 19486934 intergenic CG13084 + chr2L 19487026 intergenic CG13083 +,CG13084 + chr2L_16_19485001 chr2L_19485001 RAL-913 817 chr2L 19520132 19520190 chr2L 19520261 19520319 27 129 14.5 15.5 15.0 1.7 187 chr2L 19520132 intron CG10132 + chr2L 19520226 intron CG10132 + chr2L 19520319 intron CG10132 + chr2L_27_19520001 chr2L_19520001 RAL-913 818 chr2L 19548245 19548311 chr2L 19548377 19548443 22 132 17.5 16.5 17.0 1.2 198 chr2L 19548245 intergenic Tep4 + chr2L 19548344 intergenic Tep4 + chr2L 19548443 intergenic Tep4 + chr2L_22_19545001 chr2L_19545001 RAL-913 819 chr2L 19557777 19557984 chr2L 19557918 19558114 5 135 10.0 24.0 17.0 0.3 337 chr2L 19557777 intergenic Tep5 + chr2L 19557946 intergenic Tep5 + chr2L 19558114 exon Tep5 + chr2L_5_19555001 chr2L_19555001 RAL-913 820 chr2L 19558488 19558504 chr2L 19558642 19558644 7 152 33.0 38.5 35.8 0.2 156 chr2L 19558488 intron Tep5 + chr2L 19558566 intron Tep5 + chr2L 19558644 intron Tep5 + chr2L_7_19555001 chr2L_19555001 RAL-913 821 chr2L 19558508 19558535 chr2L 19558627 19558689 5 147 33.0 37.0 35.0 0.1 181 chr2L 19558508 intron Tep5 + chr2L 19558598 intron Tep5 + chr2L 19558689 intron Tep5 + chr2L_5_19555001 chr2L_19555001 RAL-913 822 chr2L 19559955 19560035 chr2L 19560258 19560332 23 302 9.5 8.0 8.8 2.3 377 chr2L 19559955 exon Tep5 + chr2L 19560144 exon Tep5 + chr2L 19560332 intron Tep5 + chr2L_23_19560001 chr2L_19560001 RAL-913 823 chr2L 19560847 19560859 chr2L 19560992 19561004 4 145 34.5 36.0 35.2 0.1 157 chr2L 19560847 intron Tep5 + chr2L 19560926 exon Tep5 + chr2L 19561004 exon Tep5 + chr2L_4_19560001 chr2L_19560001 RAL-913 824 chr2L 19561291 19561348 chr2L 19561484 19561539 4 192 36.5 35.5 36.0 0.1 248 chr2L 19561291 exon Tep5 + chr2L 19561415 exon Tep5 + chr2L 19561539 exon Tep5 + chr2L_4_19560001 chr2L_19560001 RAL-913 825 chr2L 19562008 19562081 chr2L 19562143 19562203 7 131 33.5 30.5 32.0 0.2 195 chr2L 19562008 exon Tep5 + chr2L 19562106 intron Tep5 + chr2L 19562203 exon Tep5 + chr2L_7_19560001 chr2L_19560001 RAL-913 826 chr2L 19620061 19620122 chr2L 19621086 19621130 jockey 19 1027 7.5 4.5 6.0 2.7 1069 chr2L 19620061 intron Lar + chr2L 19620596 intron Lar + chr2L 19621130 intron Lar + chr2L_19_19620001 chr2L_19620001 RAL-913 827 chr2L 19630935 19631009 chr2L 19631551 19631563 23 606 10.5 10.0 10.2 2.1 628 chr2L 19630935 intron Lar + chr2L 19631249 intron Lar + chr2L 19631563 intron Lar + chr2L_23_19630001 chr2L_19630001 RAL-913 828 chr2L 19638498 19638561 chr2L 19638636 19638699 21 136 8.0 14.0 11.0 1.8 201 chr2L 19638498 intron Lar + chr2L 19638598 intron Lar + chr2L 19638699 intron Lar + chr2L_21_19635001 chr2L_19635001 RAL-913 829 chr2L 19652525 19652592 chr2L 19674011 19674076 opus 31 21486 11.0 10.0 10.5 2.7 21551 chr2L 19652525 intron Lar + chr2L 19663300 intron Lar + chr2L 19674076 intron Lar + chr2L_31_19660001 chr2L_19660001 RAL-913 830 chr2L 19703504 19703555 chr2L 19712690 19712736 roo 25 9185 15.0 10.0 12.5 1.9 9232 chr2L 19703504 intron Lar + chr2L 19708120 intron Lar + chr2L 19712736 intron Lar + chr2L_25_19705001 chr2L_19705001 RAL-913 831 chr2L 19737311 19737377 chr2L 19740829 19740836 1360 13 3504 9.5 6.5 8.0 1.4 3525 chr2L 19737311 intergenic Nf-YB + chr2L 19739074 intergenic not near genes chr2L 19740836 intergenic not near genes chr2L_13_19735001 chr2L_19735001 RAL-913 832 chr2L 19754837 19754902 chr2L 19754959 19755035 26 124 11.0 11.5 11.2 2.1 198 chr2L 19754837 intron CG10631 - chr2L 19754936 intron CG10631 - chr2L 19755035 intron CG10631 - chr2L_26_19750001 chr2L_19750001 RAL-913 833 chr2L 19762760 19762829 chr2L 19763052 19763121 pogo 30 289 6.0 6.5 6.2 4.2 361 chr2L 19762760 exon fbp - chr2L 19762940 intron fbp - chr2L 19763121 intron fbp - chr2L_30_19760001 chr2L_19760001 RAL-913 834 chr2L 19795514 19795576 chr2L 19795641 19795687 12 120 11.0 15.0 13.0 0.9 173 chr2L 19795514 intron fs(2)ltoPP43 - chr2L 19795600 exon fs(2)ltoPP43 - chr2L 19795687 exon fs(2)ltoPP43 - chr2L_12_19795001 chr2L_19795001 RAL-913 835 chr2L 19821743 19821816 chr2L 19821870 19821943 27 127 16.5 11.0 13.8 1.8 200 chr2L 19821743 intron sick + chr2L 19821843 intron sick + chr2L 19821943 intron sick + chr2L_27_19820001 chr2L_19820001 RAL-913 836 chr2L 19823216 19823291 chr2L 19823347 19823430 18 138 9.0 6.0 7.5 2.1 214 chr2L 19823216 intron sick + chr2L 19823323 intron sick + chr2L 19823430 intron sick + chr2L_18_19820001 chr2L_19820001 RAL-913 837 chr2L 19824371 19824436 chr2L 19824504 19824559 34 131 9.0 11.5 10.2 3.0 188 chr2L 19824371 intron sick + chr2L 19824465 intron sick + chr2L 19824559 intron sick + chr2L_34_19820001 chr2L_19820001 RAL-913 838 chr2L 19833108 19833126 chr2L 19833235 19833253 6 127 6.0 0.0 3.0 1.5 145 chr2L 19833108 intron sick + chr2L 19833180 intron sick + chr2L 19833253 intron sick + chr2L_6_19830001 chr2L_19830001 RAL-913 839 chr2L 19837236 19837307 chr2L 19837366 19837436 5 130 11.0 8.0 9.5 0.5 200 chr2L 19837236 intron sick + chr2L 19837336 intron sick + chr2L 19837436 intron sick + chr2L_5_19835001 chr2L_19835001 RAL-913 840 chr2L 19846237 19846272 chr2L 19846368 19846403 5 131 23.0 26.5 24.8 0.2 166 chr2L 19846237 intron sick + chr2L 19846320 intron sick + chr2L 19846403 intron sick + chr2L_5_19845001 chr2L_19845001 RAL-913 841 chr2L 19878940 19878997 chr2L 19879199 19879256 25 259 12.5 5.0 8.8 2.6 316 chr2L 19878940 intron sick + chr2L 19879098 intron sick + chr2L 19879256 intron sick + chr2L_25_19875001 chr2L_19875001 RAL-913 842 chr2L 19898925 19898992 chr2L 19899115 19899162 20 185 10.0 9.5 9.8 1.9 237 chr2L 19898925 intron sick + chr2L 19899044 intron sick + chr2L 19899162 intron sick + chr2L_20_19895001 chr2L_19895001 RAL-913 843 chr2L 19901442 19901496 chr2L 19901595 19901649 5 149 36.0 31.5 33.8 0.1 207 chr2L 19901442 intron sick + chr2L 19901546 intron sick + chr2L 19901649 intron sick + chr2L_5_19900001 chr2L_19900001 RAL-913 844 chr2L 19911250 19911313 chr2L 19911388 19911451 5 138 30.5 33.0 31.8 0.2 201 chr2L 19911250 intron,3` UTR sick +,CR43097 - chr2L 19911350 intron,3` UTR sick +,CR43097 - chr2L 19911451 intron,3` UTR sick +,CR43097 - chr2L_5_19910001 chr2L_19910001 RAL-913 845 chr2L 19935213 19935221 chr2L 19935331 19935348 7 123 22.5 11.5 17.0 0.4 135 chr2L 19935213 intron sick + chr2L 19935280 intron sick + chr2L 19935348 intron sick + chr2L_7_19935001 chr2L_19935001 RAL-913 846 chr2L 19935223 19935259 chr2L 19935320 19935362 14 120 9.5 11.0 10.2 1.2 139 chr2L 19935223 intron sick + chr2L 19935292 intron sick + chr2L 19935362 intron sick + chr2L_14_19935001 chr2L_19935001 RAL-913 847 chr2L 19950160 19950206 chr2L 19950292 19950338 18 131 3.5 9.0 6.2 2.5 178 chr2L 19950160 intron sick + chr2L 19950249 intron sick + chr2L 19950338 intron sick + chr2L_18_19950001 chr2L_19950001 RAL-913 848 chr2L 20005827 20005897 chr2L 20010953 20011023 flea 24 5126 8.5 13.0 10.8 2.0 5196 chr2L 20005827 intron CG43861 - chr2L 20008425 intron CG43861 - chr2L 20011023 intron CG43861 - chr2L_24_20005001 chr2L_20005001 RAL-913 849 chr2L 20022041 20022088 chr2L 20022204 20022251 5 163 34.0 41.0 37.5 0.1 210 chr2L 20022041 intergenic not near genes chr2L 20022146 intergenic not near genes chr2L 20022251 intergenic not near genes chr2L_5_20020001 chr2L_20020001 RAL-913 850 chr2L 20079475 20079520 chr2L 20079646 20079691 17 170 19.0 10.0 14.5 1.1 216 chr2L 20079475 intron,intron neb +,fok - chr2L 20079583 intron,intron neb +,fok - chr2L 20079691 intron,intron neb +,fok - chr2L_17_20075001 chr2L_20075001 RAL-913 851 chr2L 20119482 20119507 chr2L 20119608 20119618 8 120 10.0 19.0 14.5 0.5 136 chr2L 20119482 intergenic not near genes chr2L 20119550 intergenic not near genes chr2L 20119618 intergenic not near genes chr2L_8_20115001 chr2L_20115001 RAL-913 852 chr2L 20119509 20119512 chr2L 20119596 20119632 11 107 9.0 17.0 13.0 0.8 123 chr2L 20119509 intergenic not near genes chr2L 20119570 intergenic not near genes chr2L 20119632 intergenic not near genes chr2L_11_20115001 chr2L_20115001 RAL-913 853 chr2L 20124295 20124348 chr2L 20124423 20124476 8 128 41.5 40.0 40.8 0.2 181 chr2L 20124295 intergenic not near genes chr2L 20124386 intergenic not near genes chr2L 20124476 intergenic not near genes chr2L_8_20120001 chr2L_20120001 RAL-913 854 chr2L 20225587 20225614 chr2L 20225715 20225742 13 128 7.5 9.5 8.5 1.4 155 chr2L 20225587 intergenic not near genes chr2L 20225664 intergenic not near genes chr2L 20225742 intergenic not near genes chr2L_13_20225001 chr2L_20225001 RAL-913 855 chr2L 20272076 20272134 chr2L 20282836 20282895 copia 32 10760 14.0 10.0 12.0 2.5 10819 chr2L 20272076 intergenic not near genes chr2L 20277486 intergenic not near genes chr2L 20282895 intergenic not near genes chr2L_32_20275001 chr2L_20275001 RAL-913 856 chr2L 20296486 20296521 chr2L 20296617 20296652 22 130 3.0 7.0 5.0 3.7 166 chr2L 20296486 intergenic CR43414 - chr2L 20296569 intergenic CR43414 - chr2L 20296652 3` UTR CR43414 - chr2L_22_20295001 chr2L_20295001 RAL-913 857 chr2L 20303120 20303180 chr2L 20310638 20310698 blood 31 7518 11.5 6.5 9.0 3.1 7578 chr2L 20303120 intergenic not near genes chr2L 20306909 intergenic not near genes chr2L 20310698 intergenic not near genes chr2L_31_20305001 chr2L_20305001 RAL-913 858 chr2L 20310832 20310895 chr2L 20310961 20311024 22 129 7.0 7.0 7.0 2.8 192 chr2L 20310832 intergenic spir + chr2L 20310928 intergenic spir + chr2L 20311024 intergenic spir + chr2L_22_20310001 chr2L_20310001 RAL-913 859 chr2L 20372172 20372239 chr2L 20372472 20372530 pogo 29 298 7.5 8.0 7.8 3.3 358 chr2L 20372172 intergenic Ugt37a1 - chr2L 20372351 intergenic Ugt37a1 - chr2L 20372530 exon Ugt37a1 - chr2L_29_20370001 chr2L_20370001 RAL-913 860 chr2L 20407745 20407782 chr2L 20412906 20412951 flea 8 5168 4.0 4.0 4.0 1.6 5206 chr2L 20407745 intron CG10947 - chr2L 20410348 intron CG10947 - chr2L 20412951 intron CG10947 - chr2L_8_20410001 chr2L_20410001 RAL-913 861 chr2L 20488666 20488706 chr2L 20488882 20488922 19 215 9.0 5.5 7.2 2.3 256 chr2L 20488666 5` UTR CR45360 + chr2L 20488794 intergenic CR45360 + chr2L 20488922 intergenic CR45360 +,CR45359 + chr2L_19_20485001 chr2L_20485001 RAL-913 862 chr2L 20498641 20498706 chr2L 20498790 20498855 25 149 10.0 9.5 9.8 2.3 214 chr2L 20498641 intergenic not near genes chr2L 20498748 intergenic not near genes chr2L 20498855 intergenic not near genes chr2L_25_20495001 chr2L_20495001 RAL-913 863 chr2L 20524137 20524163 chr2L 20524269 20524295 7 132 14.5 0.5 7.5 0.8 158 chr2L 20524137 intergenic not near genes chr2L 20524216 intergenic not near genes chr2L 20524295 intergenic not near genes chr2L_7_20520001 chr2L_20520001 RAL-913 864 chr2L 20549086 20549153 chr2L 20549218 20549285 34 132 8.5 17.0 12.8 2.5 199 chr2L 20549086 intergenic not near genes chr2L 20549186 intergenic not near genes chr2L 20549285 intergenic not near genes chr2L_34_20545001 chr2L_20545001 RAL-913 865 chr2L 20550584 20550618 chr2L 20550716 20550752 12 132 14.0 10.5 12.2 0.9 168 chr2L 20550584 intergenic not near genes chr2L 20550668 intergenic not near genes chr2L 20550752 intergenic not near genes chr2L_12_20550001 chr2L_20550001 RAL-913 866 chr2L 20553143 20553190 chr2L 20553269 20553316 22 125 12.5 9.0 10.8 1.9 173 chr2L 20553143 intergenic not near genes chr2L 20553230 intergenic not near genes chr2L 20553316 intergenic not near genes chr2L_22_20550001 chr2L_20550001 RAL-913 867 chr2L 20563504 20563561 chr2L 20563631 20563688 17 127 8.5 14.5 11.5 1.4 184 chr2L 20563504 intron CR45347 + chr2L 20563596 intron CR45347 + chr2L 20563688 intron CR45347 + chr2L_17_20560001 chr2L_20560001 RAL-913 868 chr2L 20568613 20568682 chr2L 20569053 20569122 X-element 33 440 9.5 10.0 9.8 3.1 509 chr2L 20568613 intron CR45347 + chr2L 20568868 intron CR45347 + chr2L 20569122 intron CR45347 + chr2L_33_20565001 chr2L_20565001 RAL-913 869 chr2L 20576178 20576237 chr2L 20583697 20583755 blood 30 7518 8.0 12.0 10.0 2.7 7577 chr2L 20576178 intergenic CR45347 + chr2L 20579966 intergenic not near genes chr2L 20583755 3` UTR CR44909 - chr2L_30_20575001 chr2L_20575001 RAL-913 870 chr2L 20601741 20601814 chr2L 20601869 20601939 36 128 6.0 4.5 5.2 5.8 198 chr2L 20601741 intron CR44909 - chr2L 20601840 intron CR44909 - chr2L 20601939 intron CR44909 - chr2L_36_20600001 chr2L_20600001 RAL-913 871 chr2L 20602672 20602747 chr2L 20602809 20602885 20 137 0.0 14.0 7.0 2.5 213 chr2L 20602672 intron CR44909 - chr2L 20602778 intron CR44909 - chr2L 20602885 intron CR44909 - chr2L_20_20600001 chr2L_20600001 RAL-913 872 chr2L 20607608 20607661 chr2L 20607717 20607765 14 111 6.0 15.0 10.5 1.2 157 chr2L 20607608 intron,3` UTR CR44909 -,CR43608 - chr2L 20607686 intron,3` UTR CR44909 -,CR43608 - chr2L 20607765 intron,3` UTR CR44909 -,CR43608 - chr2L_14_20605001 chr2L_20605001 RAL-913 873 chr2L 20639458 20639530 chr2L 20639784 20639856 INE-1 17 325 15.5 19.5 17.5 0.9 398 chr2L 20639458 intergenic not near genes chr2L 20639657 intergenic CG31680 + chr2L 20639856 intergenic CG31680 + chr2L_17_20635001 chr2L_20635001 RAL-913 874 chr2L 20643295 20643336 chr2L 20643477 20643518 11 182 10.5 15.0 12.8 0.8 223 chr2L 20643295 intergenic CG17470 -,phr6-4 - chr2L 20643406 3` UTR phr6-4 - chr2L 20643518 3` UTR phr6-4 - chr2L_11_20640001 chr2L_20640001 RAL-913 875 chr2L 20674782 20674863 chr2L 20674917 20674988 17 128 4.5 2.5 3.5 3.8 206 chr2L 20674782 intron CG31678 - chr2L 20674885 intron CG31678 - chr2L 20674988 intron CG31678 - chr2L_17_20670001 chr2L_20670001 RAL-913 876 chr2L 20676062 20676130 chr2L 20676204 20676272 7 135 25.5 30.5 28.0 0.2 210 chr2L 20676062 5` UTR ik2 + chr2L 20676167 intron ik2 + chr2L 20676272 5` UTR ik2 + chr2L_7_20675001 chr2L_20675001 RAL-913 877 chr2L 20695747 20695825 chr2L 20695885 20695963 37 137 7.5 8.5 8.0 4.1 216 chr2L 20695747 intron Hr38 - chr2L 20695855 intron Hr38 - chr2L 20695963 intron Hr38 - chr2L_37_20695001 chr2L_20695001 RAL-913 878 chr2L 20780949 20781021 chr2L 20781108 20781180 7 152 28.5 24.5 26.5 0.3 231 chr2L 20780949 intron cad + chr2L 20781064 intron cad + chr2L 20781180 intron cad + chr2L_7_20780001 chr2L_20780001 RAL-913 879 chr2L 20791840 20791902 chr2L 20791986 20792048 5 146 36.5 37.5 37.0 0.1 208 chr2L 20791840 intron vari - chr2L 20791944 intron vari - chr2L 20792048 intron vari - chr2L_5_20790001 chr2L_20790001 RAL-913 880 chr2L 20801649 20801689 chr2L 20801738 20801839 12 133 12.0 9.0 10.5 1.0 190 chr2L 20801649 intron CG9328 + chr2L 20801744 intron CG9328 + chr2L 20801839 intron CG9328 + chr2L_12_20800001 chr2L_20800001 RAL-913 881 chr2L 20818218 20818255 chr2L 20818695 20818732 6 477 30.5 36.5 33.5 0.2 514 chr2L 20818218 exon CheB38a - chr2L 20818475 exon CheB38a - chr2L 20818732 intergenic CheB38a - chr2L_6_20815001 chr2L_20815001 RAL-913 882 chr2L 20819077 20819111 chr2L 20819211 20819245 7 134 34.5 35.0 34.8 0.2 168 chr2L 20819077 intergenic not near genes chr2L 20819161 intergenic not near genes chr2L 20819245 intergenic not near genes chr2L_7_20815001 chr2L_20815001 RAL-913 883 chr2L 20826467 20826531 chr2L 20826598 20826661 21 130 17.0 11.0 14.0 1.4 194 chr2L 20826467 intron CG9331 + chr2L 20826564 intron CG9331 + chr2L 20826661 exon CG9331 + chr2L_21_20825001 chr2L_20825001 RAL-913 884 chr2L 20835766 20835838 chr2L 20836533 20836605 Quasimodo 32 767 9.0 11.0 10.0 2.9 839 chr2L 20835766 5` UTR Oseg5 - chr2L 20836186 intergenic Oseg5 -,Spn38F - chr2L 20836605 intergenic Spn38F - chr2L_32_20835001 chr2L_20835001 RAL-913 885 chr2L 20839981 20840054 chr2L 20840243 20840316 36 260 6.0 9.0 7.5 4.2 335 chr2L 20839981 intergenic not near genes chr2L 20840148 intergenic not near genes chr2L 20840316 intergenic CG31676 + chr2L_36_20840001 chr2L_20840001 RAL-913 886 chr2L 20842104 20842166 chr2L 20842278 20842340 5 174 14.5 23.0 18.8 0.3 236 chr2L 20842104 intron CG31676 + chr2L 20842222 intron CG31676 + chr2L 20842340 intron CG31676 + chr2L_5_20840001 chr2L_20840001 RAL-913 887 chr2L 20846722 20846734 chr2L 20846856 20846868 4 134 25.5 13.0 19.2 0.2 146 chr2L 20846722 intron CG31676 + chr2L 20846795 intron CG31676 + chr2L 20846868 intron CG31676 + chr2L_4_20845001 chr2L_20845001 RAL-913 888 chr2L 20846736 20846780 chr2L 20846855 20846912 15 130 18.5 12.5 15.5 0.9 176 chr2L 20846736 intron CG31676 + chr2L 20846824 intron CG31676 + chr2L 20846912 intron CG31676 + chr2L_15_20845001 chr2L_20845001 RAL-913 889 chr2L 20862582 20862593 chr2L 20862729 20862740 6 147 0.0 23.0 11.5 0.5 158 chr2L 20862582 intergenic not near genes chr2L 20862661 intergenic not near genes chr2L 20862740 intergenic not near genes chr2L_6_20860001 chr2L_20860001 RAL-913 890 chr2L 20891488 20891543 chr2L 20896638 20896694 jockey 17 5151 4.5 10.0 7.2 2.1 5206 chr2L 20891488 intron,intron CG43739 -,sky - chr2L 20894091 intron,intron CG43739 -,sky - chr2L 20896694 intron,intron CG43739 -,sky - chr2L_17_20890001 chr2L_20890001 RAL-913 891 chr2L 20901472 20901479 chr2L 20902686 20902693 1360 4 1214 6.5 21.5 14.0 0.3 1221 chr2L 20901472 intron,intron CG43739 -,sky - chr2L 20902082 intron,intron CG43739 -,sky - chr2L 20902693 intron,intron CG43739 -,sky - chr2L_4_20900001 chr2L_20900001 RAL-913 892 chr2L 20910994 20911028 chr2L 20911120 20911154 6 126 16.5 16.5 16.5 0.3 160 chr2L 20910994 intron,intron CG43739 -,sky - chr2L 20911074 intron,intron CG43739 -,sky - chr2L 20911154 intron,intron CG43739 -,sky - chr2L_6_20910001 chr2L_20910001 RAL-913 893 chr2L 20911031 20911053 chr2L 20911107 20911179 11 120 13.0 15.0 14.0 0.7 148 chr2L 20911031 intron,intron CG43739 -,sky - chr2L 20911105 intron,intron CG43739 -,sky - chr2L 20911179 intron,intron CG43739 -,sky - chr2L_11_20910001 chr2L_20910001 RAL-913 894 chr2L 20928871 20928902 chr2L 20929461 20929492 14 590 13.0 19.5 16.2 0.8 621 chr2L 20928871 intergenic not near genes chr2L 20929182 intergenic CG9270 - chr2L 20929492 3` UTR CG9270 - chr2L_14_20925001 chr2L_20925001 RAL-913 895 chr2L 20946900 20946961 chr2L 20947037 20947072 17 135 12.0 12.0 12.0 1.3 172 chr2L 20946900 intergenic CR44606 - chr2L 20946986 intergenic CR44606 - chr2L 20947072 intergenic CR44606 - chr2L_17_20945001 chr2L_20945001 RAL-913 896 chr2L 20957719 20957750 chr2L 20957863 20957867 4 131 31.0 37.5 34.2 0.1 148 chr2L 20957719 intergenic not near genes chr2L 20957793 intergenic not near genes chr2L 20957867 intergenic not near genes chr2L_4_20955001 chr2L_20955001 RAL-913 897 chr2L 20967031 20967107 chr2L 20967167 20967243 16 136 11.0 13.0 12.0 1.2 212 chr2L 20967031 3` UTR CG42238 - chr2L 20967137 3` UTR CG42238 - chr2L 20967243 3` UTR CG42238 - chr2L_16_20965001 chr2L_20965001 RAL-913 898 chr2L 20976607 20976659 chr2L 20981472 20981524 X-element 26 4864 9.0 9.0 9.0 2.6 4917 chr2L 20976607 intron CG42238 - chr2L 20979066 intron CG42238 - chr2L 20981524 intron CG42238 - chr2L_26_20975001 chr2L_20975001 RAL-913 899 chr2L 20984697 20984727 chr2L 20984839 20984869 4 142 38.5 24.5 31.5 0.1 172 chr2L 20984697 intron CG42238 - chr2L 20984783 intron CG42238 - chr2L 20984869 intron CG42238 - chr2L_4_20980001 chr2L_20980001 RAL-913 900 chr2L 20990995 20991059 chr2L 20991123 20991187 28 126 10.5 12.0 11.2 2.3 192 chr2L 20990995 intron CG42238 - chr2L 20991091 intron CG42238 - chr2L 20991187 intron CG42238 - chr2L_28_20990001 chr2L_20990001 RAL-913 901 chr2L 21001059 21001121 chr2L 21001188 21001250 7 129 35.5 36.5 36.0 0.2 191 chr2L 21001059 intron CG42238 - chr2L 21001154 intron CG42238 - chr2L 21001250 intron CG42238 - chr2L_7_21000001 chr2L_21000001 RAL-913 902 chr2L 21019280 21019357 chr2L 21019451 21019528 26 170 15.5 6.0 10.8 2.2 248 chr2L 21019280 intron CG42238 - chr2L 21019404 intron CG42238 - chr2L 21019528 intron CG42238 - chr2L_26_21015001 chr2L_21015001 RAL-913 903 chr2L 21020235 21020306 chr2L 21023962 21024010 NOF 22 3723 9.5 7.5 8.5 2.3 3775 chr2L 21020235 intron CG42238 - chr2L 21022122 intron CG42238 - chr2L 21024010 intron CG42238 - chr2L_22_21020001 chr2L_21020001 RAL-913 904 chr2L 21041094 21041100 chr2L 21049405 21049411 Tirant 4 8311 25.0 10.0 17.5 0.2 8317 chr2L 21041094 intron CG42238 - chr2L 21045252 intron CG42238 - chr2L 21049411 intron CG42238 - chr2L_4_21045001 chr2L_21045001 RAL-913 905 chr2L 21041103 21041161 chr2L 21049400 21049451 Tirant 24 8307 12.5 8.0 10.2 2.1 8348 chr2L 21041103 intron CG42238 - chr2L 21045277 intron CG42238 - chr2L 21049451 intron CG42238 - chr2L_24_21045001 chr2L_21045001 RAL-913 906 chr2L 21074876 21074947 chr2L 21075017 21075088 27 141 9.0 8.5 8.8 2.8 212 chr2L 21074876 intergenic not near genes chr2L 21074982 intergenic tadr + chr2L 21075088 intergenic tadr + chr2L_27_21070001 chr2L_21070001 RAL-913 907 chr2L 21086420 21086429 chr2L 21086585 21086594 4 165 23.5 25.0 24.2 0.2 174 chr2L 21086420 5` UTR CG33509 - chr2L 21086507 intergenic CG33509 -,ppk13 - chr2L 21086594 intergenic CG33509 -,ppk13 - chr2L_4_21085001 chr2L_21085001 RAL-913 908 chr2L 21086436 21086450 chr2L 21086558 21086615 8 154 17.5 17.5 17.5 0.4 179 chr2L 21086436 5` UTR CG33509 - chr2L 21086526 intergenic CG33509 -,ppk13 - chr2L 21086615 intergenic CG33509 -,ppk13 - chr2L_8_21085001 chr2L_21085001 RAL-913 909 chr2L 21088871 21088947 chr2L 21089004 21089080 39 132 5.0 8.5 6.8 5.0 209 chr2L 21088871 intergenic ppk13 - chr2L 21088976 intergenic ppk13 -,CG9259 + chr2L 21089080 intergenic CG9259 +,ppk13 - chr2L_39_21085001 chr2L_21085001 RAL-913 910 chr2L 21152829 21152890 chr2L 21152974 21153035 7 145 33.0 37.5 35.2 0.2 206 chr2L 21152829 intergenic not near genes chr2L 21152932 intergenic not near genes chr2L 21153035 intergenic not near genes chr2L_7_21150001 chr2L_21150001 RAL-913 911 chr2L 21158837 21158902 chr2L 21158964 21159029 22 126 10.0 7.0 8.5 2.3 192 chr2L 21158837 intergenic CG9248 +,CG9249 - chr2L 21158933 5` UTR CG9248 + chr2L 21159029 exon CG9248 + chr2L_22_21155001 chr2L_21155001 RAL-913 912 chr2L 21245259 21245276 chr2L 21245519 21245566 8 283 3.5 14.0 8.8 0.8 307 chr2L 21245259 intron Hr39 + chr2L 21245412 intron Hr39 + chr2L 21245566 intron Hr39 + chr2L_8_21245001 chr2L_21245001 RAL-913 913 chr2L 21245277 21245297 chr2L 21245517 21245584 7 272 3.5 13.0 8.2 0.8 307 chr2L 21245277 intron Hr39 + chr2L 21245430 intron Hr39 + chr2L 21245584 intron Hr39 + chr2L_7_21245001 chr2L_21245001 RAL-913 914 chr2L 21286568 21286630 chr2L 21286696 21286759 22 128 13.0 15.5 14.2 1.4 191 chr2L 21286568 exon Mio - chr2L 21286664 intron Mio - chr2L 21286759 intron Mio - chr2L_22_21285001 chr2L_21285001 RAL-913 915 chr2L 21347508 21347571 chr2L 21355030 21355093 blood 37 7521 11.0 9.5 10.2 3.3 7585 chr2L 21347508 intron Tsp39D + chr2L 21351300 intron Tsp39D + chr2L 21355093 intron Tsp39D + chr2L_37_21350001 chr2L_21350001 RAL-913 916 chr2L 21355563 21355627 chr2L 21355758 21355822 34 195 8.5 6.5 7.5 4.0 259 chr2L 21355563 exon Tsp39D + chr2L 21355692 intron Tsp39D + chr2L 21355822 intron Tsp39D + chr2L_34_21355001 chr2L_21355001 RAL-913 917 chr2L 21377432 21377482 chr2L 21378043 21378093 6 611 37.0 39.5 38.2 0.2 661 chr2L 21377432 3` UTR CG8665 + chr2L 21377762 3` UTR CG8665 + chr2L 21378093 intergenic CG8665 + chr2L_6_21375001 chr2L_21375001 RAL-913 918 chr2L 21392165 21392230 chr2L 21392301 21392366 15 136 13.0 10.0 11.5 1.2 201 chr2L 21392165 3` UTR nrv3 + chr2L 21392266 3` UTR nrv3 + chr2L 21392366 3` UTR nrv3 + chr2L_15_21390001 chr2L_21390001 RAL-913 919 chr2L 21596985 21597045 chr2L 21604777 21604826 roo 11 7793 10.0 9.0 9.5 1.0 7841 chr2L 21596985 intergenic not near genes chr2L 21600906 intergenic not near genes chr2L 21604826 intergenic not near genes chr2L_11_21600001 chr2L_21600001 RAL-913 920 chr2L 21691794 21691808 chr2L 21698314 21698328 Burdock 8 6520 17.5 2.0 9.8 0.7 6534 chr2L 21691794 intron CG31619 + chr2L 21695061 intron CG31619 + chr2L 21698328 intron CG31619 + chr2L_8_21695001 chr2L_21695001 RAL-913 921 chr2L 21750051 21750127 chr2L 21750421 21750500 29 370 15.5 12.5 14.0 1.9 449 chr2L 21750051 intron step - chr2L 21750276 intron step - chr2L 21750500 intron step - chr2L_29_21750001 chr2L_21750001 RAL-913 922 chr2L 21754623 21754686 chr2L 21754749 21754817 33 131 9.5 14.0 11.8 2.6 194 chr2L 21754623 intron step - chr2L 21754720 intron step - chr2L 21754817 intron step - chr2L_33_21750001 chr2L_21750001 RAL-913 923 chr2L 21757548 21757596 chr2L 21757678 21757727 7 131 31.5 34.5 33.0 0.2 179 chr2L 21757548 intergenic step -,CG1416 + chr2L 21757638 intergenic step -,CG1416 + chr2L 21757727 intergenic step -,CG1416 + chr2L_7_21755001 chr2L_21755001 RAL-913 924 chr2L 21771935 21771992 chr2L 21772064 21772121 29 129 12.5 16.0 14.2 1.9 186 chr2L 21771935 intron CG31612 - chr2L 21772028 intron CG31612 - chr2L 21772121 intron CG31612 - chr2L_29_21770001 chr2L_21770001 RAL-913 925 chr2L 21798025 21798060 chr2L 21877526 21877561 12 79501 43.5 45.0 44.2 0.3 79536 chr2L 21798025 intergenic CR44269 - chr2L 21837793 intergenic not near genes chr2L 21877561 intergenic not near genes chr2L_12_21835001 chr2L_21835001 RAL-913 926 chr2L 21818969 21819031 chr2L 21819114 21819176 21 143 12.0 17.0 14.5 1.4 207 chr2L 21818969 intergenic not near genes chr2L 21819072 intergenic CR44786 + chr2L 21819176 intergenic CR44786 + chr2L_21_21815001 chr2L_21815001 RAL-913 927 chr2L 21836354 21836415 chr2L 21836494 21836555 5 140 41.0 34.0 37.5 0.1 201 chr2L 21836354 3` UTR tsh + chr2L 21836454 3` UTR tsh + chr2L 21836555 3` UTR tsh + chr2L_5_21835001 chr2L_21835001 RAL-913 928 chr2L 21855468 21855497 chr2L 21855605 21855634 5 137 31.0 37.5 34.2 0.1 166 chr2L 21855468 intron CR44917 + chr2L 21855551 intron CR44917 + chr2L 21855634 intron CR44917 + chr2L_5_21855001 chr2L_21855001 RAL-913 929 chr2L 21859322 21859337 chr2L 21859408 21859467 4 115 34.5 32.5 33.5 0.1 145 chr2L 21859322 intron CR44917 + chr2L 21859394 intron CR44917 + chr2L 21859467 intron CR44917 + chr2L_4_21855001 chr2L_21855001 RAL-913 930 chr2L 21933894 21933906 chr2L 21934010 21934031 4 121 12.5 16.0 14.2 0.3 137 chr2L 21933894 intergenic not near genes chr2L 21933962 intergenic not near genes chr2L 21934031 intergenic not near genes chr2L_4_21930001 chr2L_21930001 RAL-913 931 chr2L 21953812 21953846 chr2L 21954664 21954697 4 853 40.5 39.5 40.0 0.1 885 chr2L 21953812 intergenic not near genes chr2L 21954254 intergenic not near genes chr2L 21954697 intergenic not near genes chr2L_4_21950001 chr2L_21950001 RAL-913 932 chr2L 21981637 21981702 chr2L 21990849 21990907 roo 15 9214 12.0 7.5 9.8 1.4 9270 chr2L 21981637 exon CG2528 - chr2L 21986272 intron CG2528 - chr2L 21990907 exon CG2528 - chr2L_15_21985001 chr2L_21985001 RAL-913 933 chr2L 22037328 22037389 chr2L 22037680 22037741 INE-1 23 351 13.5 8.0 10.8 1.9 413 chr2L 22037328 intergenic not near genes chr2L 22037534 intergenic CG41434 + chr2L 22037741 intergenic CG41434 + chr2L_23_22035001 chr2L_22035001 RAL-913 934 chr2L 22073016 22073024 chr2L 22073151 22073159 INE-1 5 135 22.0 8.0 15.0 0.3 143 chr2L 22073016 intergenic CG31702 + chr2L 22073088 intergenic CG31702 + chr2L 22073159 intergenic CG31702 + chr2L_5_22070001 chr2L_22070001 RAL-913 935 chr2L 22077244 22077319 chr2L 22077375 22077450 30 131 10.0 9.5 9.8 2.8 206 chr2L 22077244 intergenic not near genes chr2L 22077347 intergenic not near genes chr2L 22077450 intergenic not near genes chr2L_30_22075001 chr2L_22075001 RAL-913 936 chr2L 22164924 22164981 chr2L 22165103 22165160 26 179 18.0 14.0 16.0 1.5 236 chr2L 22164924 3` UTR CG42748 + chr2L 22165042 3` UTR CG42748 + chr2L 22165160 3` UTR CG42748 + chr2L_26_22165001 chr2L_22165001 RAL-913 937 chr2L 22165480 22165530 chr2L 22165615 22165665 24 135 17.5 15.0 16.2 1.4 185 chr2L 22165480 3` UTR CG42748 + chr2L 22165572 3` UTR CG42748 + chr2L 22165665 3` UTR CG42748 + chr2L_24_22165001 chr2L_22165001 RAL-913 938 chr2L 22197846 22197906 chr2L 22198095 22198155 24 249 13.0 11.5 12.2 1.8 309 chr2L 22197846 intron Ir40a - chr2L 22198000 intron Ir40a - chr2L 22198155 intron Ir40a - chr2L_24_22195001 chr2L_22195001 RAL-913 939 chr2L 22228102 22228116 chr2L 22228233 22228247 6 131 16.0 16.0 16.0 0.4 145 chr2L 22228102 intergenic not near genes chr2L 22228174 intergenic not near genes chr2L 22228247 intergenic not near genes chr2L_6_22225001 chr2L_22225001 RAL-913 940 chr2L 22296865 22296921 chr2L 22297042 22297098 14 177 12.0 11.5 11.8 1.1 233 chr2L 22296865 intergenic not near genes chr2L 22296982 intergenic not near genes chr2L 22297098 intergenic not near genes chr2L_14_22295001 chr2L_22295001 RAL-913 941 chr2L 22515100 22515107 chr2L 22522600 22522607 HMS-Beagle2 7 7500 17.5 5.5 11.5 0.6 7507 chr2L 22515100 intergenic not near genes chr2L 22518854 intergenic not near genes chr2L 22522607 intergenic not near genes chr2L_7_22515001 chr2L_22515001 RAL-913 942 chr2L 22515116 22515125 chr2L 22522595 22522625 HMS-Beagle2 7 7497 16.0 5.0 10.5 0.6 7509 chr2L 22515116 intergenic not near genes chr2L 22518870 intergenic not near genes chr2L 22522625 intergenic not near genes chr2L_7_22515001 chr2L_22515001 RAL-913 943 chr2L 22548892 22548930 chr2L 22550133 22550205 1360 9 1256 6.5 15.5 11.0 0.8 1313 chr2L 22548892 intergenic CG17490 + chr2L 22549548 intergenic not near genes chr2L 22550205 intergenic CG17493 + chr2L_9_22545001 chr2L_22545001 RAL-913 944 chr2L 22558345 22558414 chr2L 22558706 22558775 29 360 14.0 17.5 15.8 1.7 430 chr2L 22558345 intergenic not near genes chr2L 22558560 intergenic not near genes chr2L 22558775 intergenic not near genes chr2L_29_22555001 chr2L_22555001 RAL-913 945 chr2L 22581927 22582002 chr2L 22583766 22583842 S-element 25 1840 9.0 14.0 11.5 2.0 1915 chr2L 22581927 intron CG17494 + chr2L 22582884 intron CG17494 + chr2L 22583842 intron CG17494 + chr2L_25_22580001 chr2L_22580001 RAL-913 946 chr2L 22719393 22719465 chr2L 22727559 22727642 gypsy2 28 8173 14.0 10.0 12.0 2.2 8249 chr2L 22719393 intron CG40006 - chr2L 22723518 intron CG40006 - chr2L 22727642 intron CG40006 - chr2L_28_22720001 chr2L_22720001 RAL-913 947 chr2L 22776377 22776450 chr2L 22778216 22778268 S-element 26 1838 7.0 13.0 10.0 2.4 1891 chr2L 22776377 intergenic not near genes chr2L 22777322 intergenic not near genes chr2L 22778268 intergenic not near genes chr2L_26_22775001 chr2L_22775001 RAL-913 948 chr2L 22941202 22941272 chr2L 22941334 22941404 28 131 11.0 12.5 11.8 2.2 202 chr2L 22941202 3` UTR lt + chr2L 22941303 3` UTR lt + chr2L 22941404 3` UTR lt + chr2L_28_22940001 chr2L_22940001 RAL-913 949 chr2L 22981030 22981066 chr2L 22981165 22981194 16 134 14.5 17.5 16.0 0.9 164 chr2L 22981030 intergenic not near genes chr2L 22981112 intergenic not near genes chr2L 22981194 intergenic not near genes chr2L_16_22980001 chr2L_22980001 RAL-913 950 chr2L 23006460 23006529 chr2L 23007186 23007245 Osvaldo 17 723 9.0 14.5 11.8 1.3 785 chr2L 23006460 intron Cht3 - chr2L 23006852 intron Cht3 - chr2L 23007245 intron Cht3 - chr2L_17_23005001 chr2L_23005001 RAL-913 951 chr2L 23070217 23070265 chr2L 23076526 23076592 G5 22 6313 44.5 51.5 48.0 0.4 6375 chr2L 23070217 5` UTR CR43242 + chr2L 23073404 intergenic not near genes chr2L 23076592 intergenic not near genes chr2L_22_23070001 chr2L_23070001 RAL-913 952 chr2R 469922 469971 chr2R 473213 473262 F-element 13 3289 10.0 18.5 14.2 0.9 3340 chr2R 469922 intergenic not near genes chr2R 471592 intergenic not near genes chr2R 473262 intergenic not near genes chr2R_13_470001 chr2R_470001 RAL-913 953 chr2R 529316 529347 chr2R 537991 538022 Max-element 10 8674 12.5 17.5 15.0 0.6 8706 chr2R 529316 intron CG40378 + chr2R 533669 intron CG40378 + chr2R 538022 intron CG40378 + chr2R_10_530001 chr2R_530001 RAL-913 954 chr2R 552729 552782 chr2R 553997 554004 1360 9 1255 26.0 24.0 25.0 0.3 1275 chr2R 552729 intron CG40378 + chr2R 553366 intron CG40378 + chr2R 554004 intron CG40378 + chr2R_9_550001 chr2R_550001 RAL-913 955 chr2R 652188 652250 chr2R 652774 652831 18 582 29.5 29.0 29.2 0.6 643 chr2R 652188 intergenic not near genes chr2R 652510 intergenic not near genes chr2R 652831 intergenic not near genes chr2R_18_650001 chr2R_650001 RAL-913 956 chr2R 699078 699114 chr2R 705344 705380 297 10 6266 9.5 10.0 9.8 0.9 6302 chr2R 699078 intron CG43676 + chr2R 702229 intron CG43676 + chr2R 705380 exon CG43676 + chr2R_10_700001 chr2R_700001 RAL-913 957 chr2R 1082366 1082372 chr2R 1087192 1087198 Doc 4 4826 9.5 23.0 16.2 0.2 4832 chr2R 1082366 intron rl + chr2R 1084782 intron rl + chr2R 1087198 intron rl + chr2R_4_1080001 chr2R_1080001 RAL-913 958 chr2R 1338328 1338335 chr2R 1338459 1338466 4 131 33.0 39.0 36.0 0.1 138 chr2R 1338328 intergenic not near genes chr2R 1338397 intergenic not near genes chr2R 1338466 intergenic not near genes chr2R_4_1335001 chr2R_1335001 RAL-913 959 chr2R 1370137 1370186 chr2R 1370246 1370325 18 129 13.0 15.5 14.2 1.2 188 chr2R 1370137 intron,3` UTR l(2)41Ab +,CR44043 - chr2R 1370231 intron,3` UTR l(2)41Ab +,CR44043 - chr2R 1370325 intron,3` UTR l(2)41Ab +,CR44043 - chr2R_18_1370001 chr2R_1370001 RAL-913 960 chr2R 1513908 1513957 chr2R 1514110 1514125 6 193 94.5 101.0 97.8 0.1 217 chr2R 1513908 3` UTR Maf1 - chr2R 1514016 3` UTR Maf1 - chr2R 1514125 3` UTR Maf1 - chr2R_6_1510001 chr2R_1510001 RAL-913 961 chr2R 1516564 1516576 chr2R 1521342 1521354 1731 9 4778 51.5 23.0 37.2 0.2 4790 chr2R 1516564 exon Maf1 - chr2R 1518959 intron Maf1 - chr2R 1521354 5` UTR Maf1 - chr2R_9_1515001 chr2R_1515001 RAL-913 962 chr2R 1516578 1516603 chr2R 1521336 1521381 1731 32 4777 39.0 21.0 30.0 1.0 4803 chr2R 1516578 exon Maf1 - chr2R 1518980 intron Maf1 - chr2R 1521381 5` UTR Maf1 - chr2R_32_1515001 chr2R_1515001 RAL-913 963 chr2R 1732814 1732843 chr2R 1733011 1733040 8 197 16.0 7.5 11.8 0.6 226 chr2R 1732814 intron CG41520 + chr2R 1732927 intron CG41520 + chr2R 1733040 intron CG41520 + chr2R_8_1730001 chr2R_1730001 RAL-913 964 chr2R 2015089 2015156 chr2R 2015216 2015283 19 126 9.5 11.0 10.2 1.7 194 chr2R 2015089 intron CG17684 - chr2R 2015186 intron CG17684 - chr2R 2015283 intron CG17684 - chr2R_19_2015001 chr2R_2015001 RAL-913 965 chr2R 2110463 2110489 chr2R 2118071 2118097 17.6 9 7608 13.0 9.5 11.2 0.7 7634 chr2R 2110463 intron CG17684 - chr2R 2114280 intron CG17684 - chr2R 2118097 intron CG17684 - chr2R_9_2110001 chr2R_2110001 RAL-913 966 chr2R 2498944 2499010 chr2R 2508141 2508202 roo 39 9196 10.0 7.0 8.5 4.1 9258 chr2R 2498944 intron MFS17 - chr2R 2503573 intron MFS17 - chr2R 2508202 intron MFS17 - chr2R_39_2500001 chr2R_2500001 RAL-913 967 chr2R 2508283 2508339 chr2R 2508471 2508477 5 178 32.5 35.0 33.8 0.1 194 chr2R 2508283 intron MFS17 - chr2R 2508380 intron MFS17 - chr2R 2508477 intron MFS17 - chr2R_5_2505001 chr2R_2505001 RAL-913 968 chr2R 1373049 1373071 chr2R 2589297 2589319 Cr1a 8 1216248 37.0 43.5 40.2 0.2 1216270 chr2R 1373049 intron l(2)41Ab + chr2R 1981184 intron CG17684 - chr2R 2589319 intergenic not near genes chr2R_8_1980001 chr2R_1980001 RAL-913 969 chr2R 2591487 2591507 chr2R 2594213 2594233 roo 12 2725 49.0 25.5 37.2 0.3 2746 chr2R 2591487 intergenic not near genes chr2R 2592860 intergenic not near genes chr2R 2594233 intergenic not near genes chr2R_12_2590001 chr2R_2590001 RAL-913 970 chr2R 2875365 2875394 chr2R 2878902 2878931 HMS-Beagle 15 3560 44.0 50.0 47.0 0.3 3566 chr2R 2875365 intergenic not near genes chr2R 2877148 intergenic not near genes chr2R 2878931 intergenic not near genes chr2R_15_2875001 chr2R_2875001 RAL-913 971 chr2R 3091355 3091385 chr2R 3092151 3092181 8 796 15.5 6.5 11.0 0.7 826 chr2R 3091355 intron CG42596 + chr2R 3091768 intron CG42596 + chr2R 3092181 intron CG42596 + chr2R_8_3090001 chr2R_3090001 RAL-913 972 chr2R 3107702 3107751 chr2R 3108436 3108485 8 733 4.5 6.5 5.5 1.2 783 chr2R 3107702 intron CG42596 + chr2R 3108094 intron CG42596 + chr2R 3108485 intron CG42596 + chr2R_8_3105001 chr2R_3105001 RAL-913 973 chr2R 3144045 3144101 chr2R 3393373 3393429 Doc 16 249327 35.0 11.5 23.2 0.7 249384 chr2R 3144045 intron CG42596 + chr2R 3268737 intergenic not near genes chr2R 3393429 intergenic not near genes chr2R_16_3265001 chr2R_3265001 RAL-913 974 chr2R 3293717 3293735 chr2R 3293845 3293845 5 124 10.5 3.5 7.0 0.6 128 chr2R 3293717 intergenic not near genes chr2R 3293781 intergenic not near genes chr2R 3293845 intergenic not near genes chr2R_5_3290001 chr2R_3290001 RAL-913 975 chr2R 3532572 3532631 chr2R 3536065 3536124 Doc 21 3493 6.0 7.0 6.5 2.8 3552 chr2R 3532572 intergenic not near genes chr2R 3534348 intergenic not near genes chr2R 3536124 intergenic not near genes chr2R_21_3530001 chr2R_3530001 RAL-913 976 chr2R 3702643 3702669 chr2R 3702764 3702787 7 126 15.5 12.5 14.0 0.5 144 chr2R 3702643 intergenic not near genes chr2R 3702715 intergenic not near genes chr2R 3702787 intergenic not near genes chr2R_7_3700001 chr2R_3700001 RAL-913 977 chr2R 3704844 3704849 chr2R 3704974 3704979 4 130 13.0 23.5 18.2 0.2 135 chr2R 3704844 intergenic not near genes chr2R 3704912 intergenic not near genes chr2R 3704979 intergenic not near genes chr2R_4_3700001 chr2R_3700001 RAL-913 978 chr2R 4141909 4141922 chr2R 4150693 4150706 Dm88 6 8784 39.5 44.5 42.0 0.1 8797 chr2R 4141909 intergenic not near genes chr2R 4146308 intergenic not near genes chr2R 4150706 intergenic not near genes chr2R_6_4145001 chr2R_4145001 RAL-913 979 chr2R 4247811 4247835 chr2R 4247911 4247924 8 96 17.5 29.0 23.2 0.3 113 chr2R 4247811 intergenic not near genes chr2R 4247868 intergenic not near genes chr2R 4247924 intergenic not near genes chr2R_8_4245001 chr2R_4245001 RAL-913 980 chr2R 4508116 4508186 chr2R 4508247 4508316 22 131 11.0 10.5 10.8 1.9 200 chr2R 4508116 intron CR44100 + chr2R 4508216 5` UTR CR44100 + chr2R 4508316 5` UTR CR44100 + chr2R_22_4505001 chr2R_4505001 RAL-913 981 chr2R 4622915 4622947 chr2R 4624124 4624156 1360 4 1209 3.0 4.0 3.5 0.9 1241 chr2R 4622915 intergenic CR44101 - chr2R 4623536 intergenic not near genes chr2R 4624156 intergenic not near genes chr2R_4_4620001 chr2R_4620001 RAL-913 982 chr2R 4750301 4750365 chr2R 4751508 4751553 1360 22 1203 12.0 9.5 10.8 1.9 1252 chr2R 4750301 intron conu + chr2R 4750927 intron conu + chr2R 4751553 intron conu + chr2R_22_4750001 chr2R_4750001 RAL-913 983 chr2R 4838830 4838881 chr2R 4840403 4840454 transib2 4 1573 40.5 35.5 38.0 0.1 1624 chr2R 4838830 intergenic not near genes chr2R 4839642 intergenic not near genes chr2R 4840454 intergenic not near genes chr2R_4_4835001 chr2R_4835001 RAL-913 984 chr2R 4933353 4933382 chr2R 4933928 4933996 9 602 9.0 8.0 8.5 0.9 643 chr2R 4933353 intron Ir41a + chr2R 4933674 intron Ir41a + chr2R 4933996 intron Ir41a + chr2R_9_4930001 chr2R_4930001 RAL-913 985 chr2R 5019235 5019305 chr2R 5019371 5019441 5 134 28.5 29.5 29.0 0.2 206 chr2R 5019235 intron Ir41a + chr2R 5019338 intron Ir41a + chr2R 5019441 intron Ir41a + chr2R_5_5015001 chr2R_5015001 RAL-913 986 chr2R 5075179 5075191 chr2R 5075357 5075369 4 178 32.0 26.0 29.0 0.1 190 chr2R 5075179 intergenic not near genes chr2R 5075274 intergenic not near genes chr2R 5075369 intergenic not near genes chr2R_4_5075001 chr2R_5075001 RAL-913 987 chr2R 5125196 5125269 chr2R 5125564 5125636 6 367 21.0 14.0 17.5 0.3 440 chr2R 5125196 intron gus - chr2R 5125416 intron gus - chr2R 5125636 intron gus - chr2R_6_5125001 chr2R_5125001 RAL-913 988 chr2R 5144883 5144908 chr2R 5145014 5145039 4 131 27.0 26.5 26.8 0.1 156 chr2R 5144883 intron Atf6 + chr2R 5144961 intron Atf6 + chr2R 5145039 intron Atf6 + chr2R_4_5140001 chr2R_5140001 RAL-913 989 chr2R 5192243 5192332 chr2R 5192405 5192436 4 117 1.5 10.0 5.8 0.6 193 chr2R 5192243 intron Nipped-A - chr2R 5192340 intron Nipped-A - chr2R 5192436 intron Nipped-A - chr2R_4_5190001 chr2R_5190001 RAL-913 990 chr2R 5192348 5192353 chr2R 5192401 5192412 5 57 5.0 8.5 6.8 0.6 64 chr2R 5192348 intron Nipped-A - chr2R 5192380 intron Nipped-A - chr2R 5192412 intron Nipped-A - chr2R_5_5190001 chr2R_5190001 RAL-913 991 chr2R 5237304 5237315 chr2R 5237435 5237447 9 132 25.0 10.5 17.8 0.5 143 chr2R 5237304 intron Nipped-A - chr2R 5237376 intron Nipped-A - chr2R 5237447 intron Nipped-A - chr2R_9_5235001 chr2R_5235001 RAL-913 992 chr2R 5237316 5237343 chr2R 5237434 5237464 14 130 20.5 10.5 15.5 0.8 148 chr2R 5237316 intron Nipped-A - chr2R 5237390 intron Nipped-A - chr2R 5237464 intron Nipped-A - chr2R_14_5235001 chr2R_5235001 RAL-913 993 chr2R 5417949 5418017 chr2R 5420631 5420692 Burdock 33 2682 11.5 10.5 11.0 2.8 2743 chr2R 5417949 intron laccase2 + chr2R 5419320 intron laccase2 + chr2R 5420692 intron laccase2 + chr2R_33_5415001 chr2R_5415001 RAL-913 994 chr2R 5472317 5472380 chr2R 5472462 5472523 35 143 7.0 9.5 8.2 3.8 206 chr2R 5472317 intron CG30440 - chr2R 5472420 intron CG30440 - chr2R 5472523 intron CG30440 - chr2R_35_5470001 chr2R_5470001 RAL-913 995 chr2R 5475413 5475468 chr2R 5475727 5475782 7 314 17.0 26.5 21.8 0.3 369 chr2R 5475413 intron CG30440 - chr2R 5475598 intron CG30440 - chr2R 5475782 intron CG30440 - chr2R_7_5475001 chr2R_5475001 RAL-913 996 chr2R 5476305 5476379 chr2R 5476899 5476973 35 591 12.0 13.0 12.5 2.6 668 chr2R 5476305 intron CG30440 - chr2R 5476639 intron CG30440 - chr2R 5476973 intron CG30440 - chr2R_35_5475001 chr2R_5475001 RAL-913 997 chr2R 5484850 5484889 chr2R 5484987 5485026 25 136 4.5 18.5 11.5 2.0 176 chr2R 5484850 intron CG30440 - chr2R 5484938 intron CG30440 - chr2R 5485026 intron CG30440 - chr2R_25_5480001 chr2R_5480001 RAL-913 998 chr2R 5515949 5516019 chr2R 5516341 5516412 29 392 14.0 11.5 12.8 2.1 463 chr2R 5515949 intron CG30438 + chr2R 5516180 intron CG30438 + chr2R 5516412 intron CG30438 + chr2R_29_5515001 chr2R_5515001 RAL-913 999 chr2R 5541891 5541951 chr2R 5542174 5542234 6 282 33.5 33.5 33.5 0.2 343 chr2R 5541891 intron CG30438 + chr2R 5542062 intron CG30438 + chr2R 5542234 intron CG30438 + chr2R_6_5540001 chr2R_5540001 RAL-913 1000 chr2R 5581405 5581420 chr2R 5627664 5627666 6 46257 36.5 24.0 30.2 0.2 46261 chr2R 5581405 intergenic not near genes chr2R 5604536 intron Fis1 - chr2R 5627666 intergenic not near genes chr2R_6_5600001 chr2R_5600001 RAL-913 1001 chr2R 5649097 5649117 chr2R 5701466 5701487 4 52370 32.0 18.0 25.0 0.2 52390 chr2R 5649097 intron CG11665 - chr2R 5675292 intergenic not near genes chr2R 5701487 intergenic not near genes chr2R_4_5675001 chr2R_5675001 RAL-913 1002 chr2R 5653318 5653383 chr2R 5653467 5653532 28 149 18.0 17.0 17.5 1.5 214 chr2R 5653318 intergenic CG1344 + chr2R 5653425 intergenic CG1344 + chr2R 5653532 intergenic CG1344 + chr2R_28_5650001 chr2R_5650001 RAL-913 1003 chr2R 5664235 5664310 chr2R 5664365 5664440 38 129 11.5 16.5 14.0 2.5 205 chr2R 5664235 5` UTR CR45472 + chr2R 5664338 intron CR45472 + chr2R 5664440 intron CR45472 + chr2R_38_5660001 chr2R_5660001 RAL-913 1004 chr2R 5670135 5670167 chr2R 5670261 5670293 6 126 11.0 14.0 12.5 0.4 158 chr2R 5670135 intergenic CG8245 + chr2R 5670214 intergenic CG8245 + chr2R 5670293 intergenic CG8245 + chr2R_6_5670001 chr2R_5670001 RAL-913 1005 chr2R 5674545 5674619 chr2R 5674678 5674752 18 133 8.5 7.0 7.8 2.0 207 chr2R 5674545 intergenic not near genes chr2R 5674648 intergenic not near genes chr2R 5674752 intergenic not near genes chr2R_18_5670001 chr2R_5670001 RAL-913 1006 chr2R 5717007 5717052 chr2R 5717133 5717178 12 126 7.5 18.0 12.8 0.9 171 chr2R 5717007 intron ap - chr2R 5717092 intron ap - chr2R 5717178 intron ap - chr2R_12_5715001 chr2R_5715001 RAL-913 1007 chr2R 5722537 5722605 chr2R 5722754 5722828 7 220 7.0 5.0 6.0 1.0 291 chr2R 5722537 intron ap - chr2R 5722682 intron ap - chr2R 5722828 intron ap - chr2R_7_5720001 chr2R_5720001 RAL-913 1008 chr2R 5750408 5750454 chr2R 5750550 5750596 21 141 21.5 17.0 19.2 1.0 188 chr2R 5750408 intergenic not near genes chr2R 5750502 intergenic not near genes chr2R 5750596 intergenic not near genes chr2R_21_5750001 chr2R_5750001 RAL-913 1009 chr2R 5772479 5772549 chr2R 5772623 5772685 32 142 15.0 15.0 15.0 2.0 206 chr2R 5772479 3` UTR Gp210 + chr2R 5772582 3` UTR Gp210 + chr2R 5772685 3` UTR Gp210 + chr2R_32_5770001 chr2R_5770001 RAL-913 1010 chr2R 5772786 5772848 chr2R 5772918 5772980 27 131 15.0 15.0 15.0 1.7 194 chr2R 5772786 3` UTR Gp210 + chr2R 5772883 3` UTR Gp210 + chr2R 5772980 3` UTR Gp210 + chr2R_27_5770001 chr2R_5770001 RAL-913 1011 chr2R 5790420 5790489 chr2R 5790555 5790624 33 135 14.5 12.5 13.5 2.3 204 chr2R 5790420 intergenic not near genes chr2R 5790522 intergenic not near genes chr2R 5790624 intergenic not near genes chr2R_33_5790001 chr2R_5790001 RAL-913 1012 chr2R 5835897 5835966 chr2R 5836043 5836112 5 141 37.0 32.5 34.8 0.1 215 chr2R 5835897 intron dpr12 + chr2R 5836004 intron dpr12 + chr2R 5836112 intron dpr12 + chr2R_5_5835001 chr2R_5835001 RAL-913 1013 chr2R 5869231 5869296 chr2R 5874357 5874422 flea 37 5126 12.5 9.5 11.0 3.1 5191 chr2R 5869231 intergenic not near genes chr2R 5871826 intergenic not near genes chr2R 5874422 intergenic not near genes chr2R_37_5870001 chr2R_5870001 RAL-913 1014 chr2R 5876835 5876901 chr2R 5876977 5877022 25 147 8.0 11.5 9.8 2.3 187 chr2R 5876835 intergenic not near genes chr2R 5876928 intergenic not near genes chr2R 5877022 intergenic not near genes chr2R_25_5875001 chr2R_5875001 RAL-913 1015 chr2R 5878879 5878951 chr2R 5879009 5879081 28 128 6.5 11.0 8.8 2.9 202 chr2R 5878879 intergenic CG44438 - chr2R 5878980 intergenic CG44438 - chr2R 5879081 intergenic CG44438 - chr2R_28_5875001 chr2R_5875001 RAL-913 1016 chr2R 5885325 5885377 chr2R 5885504 5885556 22 179 6.5 12.0 9.2 2.2 231 chr2R 5885325 5` UTR CR44125 + chr2R 5885440 5` UTR CR44125 + chr2R 5885556 5` UTR CR44125 + chr2R_22_5885001 chr2R_5885001 RAL-913 1017 chr2R 5902114 5902191 chr2R 5909723 5909735 17.6 27 7606 7.5 10.5 9.0 2.7 7621 chr2R 5902114 5` UTR CG43366 + chr2R 5905924 intron CG43366 + chr2R 5909735 intron CG43366 + chr2R_27_5905001 chr2R_5905001 RAL-913 1018 chr2R 5953031 5953044 chr2R 5953159 5953172 9 128 17.5 1.0 9.2 0.9 141 chr2R 5953031 intergenic not near genes chr2R 5953102 intergenic not near genes chr2R 5953172 intergenic not near genes chr2R_9_5950001 chr2R_5950001 RAL-913 1019 chr2R 5991888 5991958 chr2R 5992024 5992096 23 137 15.5 13.5 14.5 1.5 208 chr2R 5991888 intron Src42A + chr2R 5991992 intron Src42A + chr2R 5992096 intron Src42A + chr2R_23_5990001 chr2R_5990001 RAL-913 1020 chr2R 6024971 6025170 chr2R 6025139 6025425 26 200 5.5 7.0 6.2 3.6 454 chr2R 6024971 intergenic not near genes chr2R 6025198 intergenic not near genes chr2R 6025425 intergenic not near genes chr2R_26_6025001 chr2R_6025001 RAL-913 1021 chr2R 6025182 6025188 chr2R 6025440 6025446 4 258 6.5 26.5 16.5 0.2 264 chr2R 6025182 intergenic not near genes chr2R 6025314 intergenic not near genes chr2R 6025446 intergenic not near genes chr2R_4_6025001 chr2R_6025001 RAL-913 1022 chr2R 6033404 6033468 chr2R 6033539 6033603 24 132 9.0 12.0 10.5 2.1 199 chr2R 6033404 intron SCAP - chr2R 6033504 intron SCAP - chr2R 6033603 intron SCAP - chr2R_24_6030001 chr2R_6030001 RAL-913 1023 chr2R 6065707 6065730 chr2R 6065869 6065871 6 158 10.0 9.5 9.8 0.6 164 chr2R 6065707 intron CCHa2-R + chr2R 6065789 intron CCHa2-R + chr2R 6065871 intron CCHa2-R + chr2R_6_6065001 chr2R_6065001 RAL-913 1024 chr2R 6065731 6065781 chr2R 6065865 6065893 14 152 6.0 9.0 7.5 1.6 162 chr2R 6065731 intron CCHa2-R + chr2R 6065812 intron CCHa2-R + chr2R 6065893 exon CCHa2-R + chr2R_14_6065001 chr2R_6065001 RAL-913 1025 chr2R 6088322 6088389 chr2R 6088465 6088518 35 142 13.5 15.0 14.2 2.3 196 chr2R 6088322 intergenic not near genes chr2R 6088420 intergenic not near genes chr2R 6088518 intergenic not near genes chr2R_35_6085001 chr2R_6085001 RAL-913 1026 chr2R 6089817 6089848 chr2R 6089946 6089977 6 129 30.0 30.0 30.0 0.2 160 chr2R 6089817 intergenic not near genes chr2R 6089897 intergenic not near genes chr2R 6089977 intergenic EcR - chr2R_6_6085001 chr2R_6085001 RAL-913 1027 chr2R 6096672 6096751 chr2R 6101920 6101959 BS 13 5240 8.0 7.0 7.5 1.5 5287 chr2R 6096672 intron EcR - chr2R 6099316 intron EcR - chr2R 6101959 intron EcR - chr2R_13_6095001 chr2R_6095001 RAL-913 1028 chr2R 6129285 6129342 chr2R 6129413 6129470 23 126 12.5 9.0 10.8 1.9 185 chr2R 6129285 intron EcR - chr2R 6129378 intron EcR - chr2R 6129470 intron EcR - chr2R_23_6125001 chr2R_6125001 RAL-913 1029 chr2R 6168178 6168219 chr2R 6168310 6168351 5 130 38.5 39.5 39.0 0.1 173 chr2R 6168178 intron EcR - chr2R 6168264 intron EcR - chr2R 6168351 intron EcR - chr2R_5_6165001 chr2R_6165001 RAL-913 1030 chr2R 6169271 6169288 chr2R 6169449 6169466 13 178 11.5 17.5 14.5 0.8 195 chr2R 6169271 intergenic EcR - chr2R 6169368 intergenic EcR - chr2R 6169466 intergenic EcR - chr2R_13_6165001 chr2R_6165001 RAL-913 1031 chr2R 6178081 6178145 chr2R 6178257 6178321 36 176 4.0 10.0 7.0 4.5 240 chr2R 6178081 intergenic not near genes chr2R 6178201 intergenic not near genes chr2R 6178321 intergenic not near genes chr2R_36_6175001 chr2R_6175001 RAL-913 1032 chr2R 6194641 6194695 chr2R 6194774 6194828 24 133 14.5 16.5 15.5 1.5 187 chr2R 6194641 intron Ptr - chr2R 6194734 intron Ptr - chr2R 6194828 intron Ptr - chr2R_24_6190001 chr2R_6190001 RAL-913 1033 chr2R 3998872 3998878 chr2R 6486797 6486803 6 2487925 36.0 27.0 31.5 0.2 2487931 chr2R 3998872 intergenic not near genes chr2R 5242838 intron Nipped-A - chr2R 6486803 intergenic not near genes chr2R_6_5240001 chr2R_5240001 RAL-913 1034 chr2R 6494493 6494547 chr2R 6499305 6499359 F-element 14 4812 8.0 7.5 7.8 1.6 4866 chr2R 6494493 intergenic not near genes chr2R 6496926 intergenic not near genes chr2R 6499359 intergenic not near genes chr2R_14_6495001 chr2R_6495001 RAL-913 1035 chr2R 6530722 6530795 chr2R 6530852 6530925 35 129 16.5 15.0 15.8 2.1 203 chr2R 6530722 intron jing + chr2R 6530824 intron jing + chr2R 6530925 intron jing + chr2R_35_6530001 chr2R_6530001 RAL-913 1036 chr2R 6532632 6532664 chr2R 6532780 6532825 6 158 12.5 10.5 11.5 0.5 193 chr2R 6532632 intron,3` UTR jing +,CR43905 - chr2R 6532728 intron,3` UTR jing +,CR43905 - chr2R 6532825 intron,3` UTR jing +,CR43905 - chr2R_6_6530001 chr2R_6530001 RAL-913 1037 chr2R 6532665 6532693 chr2R 6532779 6532854 9 143 9.5 10.5 10.0 0.8 189 chr2R 6532665 intron,3` UTR jing +,CR43905 - chr2R 6532760 intron,3` UTR jing +,CR43905 - chr2R 6532854 intron,3` UTR jing +,CR43905 - chr2R_9_6530001 chr2R_6530001 RAL-913 1038 chr2R 6539779 6539844 chr2R 6539952 6540017 9 173 14.5 14.0 14.2 0.6 238 chr2R 6539779 intron jing + chr2R 6539898 intron jing + chr2R 6540017 intron jing + chr2R_9_6535001 chr2R_6535001 RAL-913 1039 chr2R 6541202 6541272 chr2R 6541356 6541421 8 153 40.5 32.0 36.2 0.2 219 chr2R 6541202 intron jing + chr2R 6541312 intron jing + chr2R 6541421 intron jing + chr2R_8_6540001 chr2R_6540001 RAL-913 1040 chr2R 6579760 6579803 chr2R 6584897 6584940 flea 25 5137 9.0 11.0 10.0 2.3 5180 chr2R 6579760 intron jing + chr2R 6582350 intron jing + chr2R 6584940 intron jing + chr2R_25_6580001 chr2R_6580001 RAL-913 1041 chr2R 6608791 6608858 chr2R 6611204 6611264 22 2411 58.0 47.5 52.8 0.4 2473 chr2R 6608791 intron jing + chr2R 6610028 intron jing + chr2R 6611264 intron jing + chr2R_22_6610001 chr2R_6610001 RAL-913 1042 chr2R 6633152 6633223 chr2R 6633279 6633350 34 126 10.0 14.0 12.0 2.6 198 chr2R 6633152 intergenic Vha16-1 -,Trap1 - chr2R 6633251 intergenic Vha16-1 -,Trap1 - chr2R 6633350 intergenic Vha16-1 -,Trap1 - chr2R_34_6630001 chr2R_6630001 RAL-913 1043 chr2R 6672974 6673039 chr2R 6673111 6673176 22 134 12.5 13.0 12.8 1.6 202 chr2R 6672974 exon Hsepi - chr2R 6673075 5` UTR Hsepi - chr2R 6673176 5` UTR Hsepi - chr2R_22_6670001 chr2R_6670001 RAL-913 1044 chr2R 6699553 6699613 chr2R 6699688 6699748 34 135 16.0 19.5 17.8 1.8 195 chr2R 6699553 intergenic Rab2 + chr2R 6699650 intergenic Rab2 + chr2R 6699748 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_34_6695001 chr2R_6695001 RAL-913 1045 chr2R 6712567 6712600 chr2R 6712688 6712747 5 142 28.0 34.5 31.2 0.2 180 chr2R 6712567 intron,intron CG3409 -,CG45092 - chr2R 6712657 intron,intron CG3409 -,CG45092 - chr2R 6712747 intron,intron CG3409 -,CG45092 - chr2R_5_6710001 chr2R_6710001 RAL-913 1046 chr2R 6716284 6716334 chr2R 6718251 6718301 23 1967 12.5 12.0 12.2 1.7 2017 chr2R 6716284 intergenic Zip42C.1 -,CG3409 -,CG45092 - chr2R 6717292 exon Zip42C.1 - chr2R 6718301 3` UTR Zip42C.2 - chr2R_23_6715001 chr2R_6715001 RAL-913 1047 chr2R 6738810 6738854 chr2R 6738942 6738986 7 132 19.0 23.5 21.2 0.3 176 chr2R 6738810 intron l(2)01289 - chr2R 6738898 intron l(2)01289 - chr2R 6738986 intron l(2)01289 - chr2R_7_6735001 chr2R_6735001 RAL-913 1048 chr2R 6786409 6786423 chr2R 6786613 6786627 7 204 15.0 26.0 20.5 0.3 218 chr2R 6786409 intron Epac - chr2R 6786518 intron Epac - chr2R 6786627 intron Epac - chr2R_7_6785001 chr2R_6785001 RAL-913 1049 chr2R 6794722 6794732 chr2R 6794819 6794864 6 125 17.5 12.0 14.8 0.4 142 chr2R 6794722 intron Epac - chr2R 6794793 intron Epac - chr2R 6794864 intron Epac - chr2R_6_6790001 chr2R_6790001 RAL-913 1050 chr2R 6794736 6794752 chr2R 6794811 6794884 6 121 15.0 12.5 13.8 0.4 148 chr2R 6794736 intron Epac - chr2R 6794810 intron Epac - chr2R 6794884 intron Epac - chr2R_6_6790001 chr2R_6790001 RAL-913 1051 chr2R 6817599 6817636 chr2R 6817718 6817770 17 133 14.5 9.5 12.0 1.3 171 chr2R 6817599 3` UTR koi + chr2R 6817684 3` UTR koi + chr2R 6817770 3` UTR koi + chr2R_17_6815001 chr2R_6815001 RAL-913 1052 chr2R 6861568 6861600 chr2R 6861696 6861727 4 127 31.5 33.0 32.2 0.1 159 chr2R 6861568 intergenic coro - chr2R 6861648 intergenic coro - chr2R 6861727 intergenic coro - chr2R_4_6860001 chr2R_6860001 RAL-913 1053 chr2R 6870566 6870601 chr2R 6870719 6870754 4 153 28.5 29.0 28.8 0.1 188 chr2R 6870566 intron coro - chr2R 6870660 intron coro - chr2R 6870754 intron coro - chr2R_4_6870001 chr2R_6870001 RAL-913 1054 chr2R 6876175 6876234 chr2R 6876307 6876366 4 132 31.0 36.0 33.5 0.1 191 chr2R 6876175 5` UTR,intron CR44169 +,Spn42Da - chr2R 6876270 intron,intron CR44169 +,Spn42Da - chr2R 6876366 5` UTR,intron CR44169 +,Spn42Da - chr2R_4_6875001 chr2R_6875001 RAL-913 1055 chr2R 6896993 6896995 chr2R 6897104 6897176 4 156 10.0 9.0 9.5 0.4 183 chr2R 6896993 intron CG30158 + chr2R 6897084 intron CG30158 + chr2R 6897176 intron CG30158 + chr2R_4_6895001 chr2R_6895001 RAL-913 1056 chr2R 6898269 6898284 chr2R 6898662 6898677 7 391 29.0 16.0 22.5 0.3 408 chr2R 6898269 intron CG30158 + chr2R 6898473 intron CG30158 + chr2R 6898677 intron CG30158 + chr2R_7_6895001 chr2R_6895001 RAL-913 1057 chr2R 6898294 6898330 chr2R 6898652 6898717 13 386 14.5 13.0 13.8 0.9 423 chr2R 6898294 intron CG30158 + chr2R 6898506 intron CG30158 + chr2R 6898717 intron CG30158 + chr2R_13_6895001 chr2R_6895001 RAL-913 1058 chr2R 6952128 6952142 chr2R 6959758 6959772 opus 14 7630 24.0 14.0 19.0 0.7 7644 chr2R 6952128 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955950 intron,intron mim -,CheB42c - chr2R 6959772 intron,intron mim -,CheB42c - chr2R_14_6955001 chr2R_6955001 RAL-913 1059 chr2R 6952147 6952185 chr2R 6959750 6959815 opus 15 7628 14.0 11.5 12.8 1.1 7668 chr2R 6952147 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955981 intron,intron mim -,CheB42c - chr2R 6959815 intron,intron mim -,CheB42c - chr2R_15_6955001 chr2R_6955001 RAL-913 1060 chr2R 7067948 7067992 chr2R 7068052 7068086 7 109 13.0 7.0 10.0 0.6 138 chr2R 7067948 intergenic CG12836 + chr2R 7068017 intergenic CG12836 + chr2R 7068086 intergenic CG12836 + chr2R_7_7065001 chr2R_7065001 RAL-913 1061 chr2R 7091172 7091235 chr2R 7091304 7091367 9 132 36.5 36.0 36.2 0.2 195 chr2R 7091172 intron esn + chr2R 7091270 intron esn + chr2R 7091367 intron esn + chr2R_9_7090001 chr2R_7090001 RAL-913 1062 chr2R 7099651 7099715 chr2R 7099777 7099841 21 126 10.0 14.5 12.2 1.6 190 chr2R 7099651 intron esn + chr2R 7099746 intron esn + chr2R 7099841 intron esn + chr2R_21_7095001 chr2R_7095001 RAL-913 1063 chr2R 7101594 7101638 chr2R 7101739 7101783 6 145 27.0 21.0 24.0 0.2 189 chr2R 7101594 intron esn + chr2R 7101688 intron esn + chr2R 7101783 intron esn + chr2R_6_7100001 chr2R_7100001 RAL-913 1064 chr2R 7120109 7120111 chr2R 7120253 7120260 4 148 23.5 21.0 22.2 0.2 151 chr2R 7120109 intron esn + chr2R 7120184 intron esn + chr2R 7120260 intron esn + chr2R_4_7120001 chr2R_7120001 RAL-913 1065 chr2R 7120112 7120144 chr2R 7120251 7120293 14 148 19.0 21.0 20.0 0.7 181 chr2R 7120112 intron esn + chr2R 7120202 intron esn + chr2R 7120293 intron esn + chr2R_14_7120001 chr2R_7120001 RAL-913 1066 chr2R 7139861 7139949 chr2R 7141414 7141491 hopper2 4 1548 1.5 8.5 5.0 0.7 1630 chr2R 7139861 intergenic not near genes chr2R 7140676 intergenic not near genes chr2R 7141491 intergenic not near genes chr2R_4_7140001 chr2R_7140001 RAL-913 1067 chr2R 7160514 7160582 chr2R 7160642 7160710 13 126 19.0 17.0 18.0 0.7 196 chr2R 7160514 intron pk + chr2R 7160612 intron pk + chr2R 7160710 intron pk + chr2R_13_7160001 chr2R_7160001 RAL-913 1068 chr2R 7164061 7164127 chr2R 7164245 7164311 4 184 38.5 30.5 34.5 0.1 250 chr2R 7164061 intron pk + chr2R 7164186 intron pk + chr2R 7164311 intron pk + chr2R_4_7160001 chr2R_7160001 RAL-913 1069 chr2R 7171236 7171275 chr2R 7171371 7171411 20 135 14.5 20.0 17.2 1.1 175 chr2R 7171236 intron pk + chr2R 7171324 intron pk + chr2R 7171411 intron pk + chr2R_20_7170001 chr2R_7170001 RAL-913 1070 chr2R 7196531 7196596 chr2R 7201349 7201371 F-element 14 4821 6.5 2.5 4.5 2.5 4840 chr2R 7196531 intron pk + chr2R 7198951 intron pk + chr2R 7201371 intron pk + chr2R_14_7195001 chr2R_7195001 RAL-913 1071 chr2R 7209844 7209860 chr2R 7217638 7217671 roo 5 7797 6.0 10.0 8.0 0.6 7827 chr2R 7209844 intron pk + chr2R 7213758 intron pk + chr2R 7217671 intron pk + chr2R_5_7210001 chr2R_7210001 RAL-913 1072 chr2R 7235785 7235841 chr2R 7240916 7240957 jockey 23 5135 17.5 4.5 11.0 1.9 5172 chr2R 7235785 intergenic not near genes chr2R 7238371 intergenic not near genes chr2R 7240957 intergenic not near genes chr2R_23_7235001 chr2R_7235001 RAL-913 1073 chr2R 7253501 7253573 chr2R 7253866 7253938 25 362 13.5 7.5 10.5 2.2 437 chr2R 7253501 intergenic not near genes chr2R 7253720 intergenic not near genes chr2R 7253938 intergenic not near genes chr2R_25_7250001 chr2R_7250001 RAL-913 1074 chr2R 7262155 7262206 chr2R 7269265 7269317 297 5 7104 11.0 18.5 14.8 0.3 7162 chr2R 7262155 intergenic not near genes chr2R 7265736 intergenic not near genes chr2R 7269317 intergenic not near genes chr2R_5_7265001 chr2R_7265001 RAL-913 1075 chr2R 7269844 7269890 chr2R 7273929 7273953 9 4070 49.0 29.5 39.2 0.2 4109 chr2R 7269844 intergenic not near genes chr2R 7271898 intergenic Br140 - chr2R 7273953 exon Br140 - chr2R_9_7270001 chr2R_7270001 RAL-913 1076 chr2R 7290145 7290202 chr2R 7290297 7290354 4 152 41.0 34.5 37.8 0.1 209 chr2R 7290145 intron pwn + chr2R 7290250 intron pwn + chr2R 7290354 intron pwn + chr2R_4_7290001 chr2R_7290001 RAL-913 1077 chr2R 7328078 7328150 chr2R 7328239 7328311 31 160 6.0 10.0 8.0 3.4 233 chr2R 7328078 intron,intron Dscam1 -,CR45129 + chr2R 7328194 intron,intron Dscam1 -,CR45129 + chr2R 7328311 intron,intron Dscam1 -,CR45129 + chr2R_31_7325001 chr2R_7325001 RAL-913 1078 chr2R 7363823 7363895 chr2R 7364038 7364110 20 213 11.0 12.5 11.8 1.6 287 chr2R 7363823 intron Dscam1 - chr2R 7363966 intron Dscam1 - chr2R 7364110 intron Dscam1 - chr2R_20_7360001 chr2R_7360001 RAL-913 1079 chr2R 7418105 7418164 chr2R 7418234 7418293 8 128 35.0 34.0 34.5 0.2 188 chr2R 7418105 intergenic not near genes chr2R 7418199 intergenic not near genes chr2R 7418293 intergenic not near genes chr2R_8_7415001 chr2R_7415001 RAL-913 1080 chr2R 7434855 7434884 chr2R 7439206 7439235 Juan 5 4351 31.0 33.5 32.2 0.2 4380 chr2R 7434855 3` UTR so + chr2R 7437045 intergenic not near genes chr2R 7439235 intergenic not near genes chr2R_5_7435001 chr2R_7435001 RAL-913 1081 chr2R 7450157 7450221 chr2R 7450297 7450361 5 140 35.0 39.5 37.2 0.1 204 chr2R 7450157 intron fa2h - chr2R 7450259 intron fa2h - chr2R 7450361 intron fa2h - chr2R_5_7450001 chr2R_7450001 RAL-913 1082 chr2R 7547523 7547550 chr2R 7547646 7547678 5 126 27.5 24.0 25.8 0.2 155 chr2R 7547523 intron Corin + chr2R 7547600 intron Corin + chr2R 7547678 intron Corin + chr2R_5_7545001 chr2R_7545001 RAL-913 1083 chr2R 7608367 7608413 chr2R 7613620 7613666 I-element 13 5253 12.5 11.0 11.8 1.0 5299 chr2R 7608367 intron CG1358 - chr2R 7611016 intron CG1358 - chr2R 7613666 intron CG1358 - chr2R_13_7610001 chr2R_7610001 RAL-913 1084 chr2R 7608415 7608426 chr2R 7613612 7613668 I-element 10 5246 11.0 10.0 10.5 0.9 5253 chr2R 7608415 intron CG1358 - chr2R 7611042 intron CG1358 - chr2R 7613668 intron CG1358 - chr2R_10_7610001 chr2R_7610001 RAL-913 1085 chr2R 7645761 7645831 chr2R 7646077 7646147 27 315 5.0 8.0 6.5 3.6 386 chr2R 7645761 intron CG43340 + chr2R 7645954 intron CG43340 + chr2R 7646147 intron CG43340 + chr2R_27_7645001 chr2R_7645001 RAL-913 1086 chr2R 7657113 7657145 chr2R 7657245 7657248 8 125 20.5 13.5 17.0 0.4 135 chr2R 7657113 5` UTR CG30495 + chr2R 7657180 5` UTR CG30495 + chr2R 7657248 exon CG30495 + chr2R_8_7655001 chr2R_7655001 RAL-913 1087 chr2R 7657147 7657186 chr2R 7657244 7657296 15 120 14.5 13.5 14.0 1.0 149 chr2R 7657147 5` UTR CG30495 + chr2R 7657222 exon CG30495 + chr2R 7657296 exon CG30495 + chr2R_15_7655001 chr2R_7655001 RAL-913 1088 chr2R 7714062 7714098 chr2R 7714188 7714231 5 132 31.5 37.5 34.5 0.1 169 chr2R 7714062 exon CG1942 + chr2R 7714146 3` UTR CG1942 + chr2R 7714231 intergenic CG1942 + chr2R_5_7710001 chr2R_7710001 RAL-913 1089 chr2R 7760240 7760304 chr2R 7760427 7760485 22 183 12.5 14.0 13.2 1.5 245 chr2R 7760240 intron,intron CG30497 -,CG45093 - chr2R 7760362 intron,intron CG30497 -,CG45093 - chr2R 7760485 intron,intron CG30497 -,CG45093 - chr2R_22_7760001 chr2R_7760001 RAL-913 1090 chr2R 7790515 7790579 chr2R 7790636 7790672 23 129 11.0 9.0 10.0 2.1 157 chr2R 7790515 intron CG12824 + chr2R 7790594 exon CG12824 + chr2R 7790672 exon CG12824 + chr2R_23_7790001 chr2R_7790001 RAL-913 1091 chr2R 7815638 7815691 chr2R 7822147 7822210 Burdock 31 6518 9.5 9.5 9.5 3.0 6572 chr2R 7815638 intergenic CG1882 + chr2R 7818924 intergenic not near genes chr2R 7822210 3` UTR cathD - chr2R_31_7815001 chr2R_7815001 RAL-913 1092 chr2R 7851227 7851285 chr2R 7851351 7851412 19 134 11.5 14.0 12.8 1.4 185 chr2R 7851227 intron Dgk - chr2R 7851320 intron Dgk - chr2R 7851412 intron Dgk - chr2R_19_7850001 chr2R_7850001 RAL-913 1093 chr2R 7862185 7862251 chr2R 7867349 7867414 flea 20 5162 5.0 9.5 7.2 2.4 5229 chr2R 7862185 intron Dgk - chr2R 7864800 intron Dgk - chr2R 7867414 intron Dgk - chr2R_20_7860001 chr2R_7860001 RAL-913 1094 chr2R 7869149 7869202 chr2R 7873985 7874037 Doc 26 4835 14.0 13.5 13.8 1.8 4888 chr2R 7869149 intron Dgk - chr2R 7871593 intron Dgk - chr2R 7874037 intron Dgk - chr2R_26_7870001 chr2R_7870001 RAL-913 1095 chr2R 7884149 7884225 chr2R 7884283 7884338 22 131 9.0 7.5 8.2 2.4 189 chr2R 7884149 intron Dgk - chr2R 7884244 intron Dgk - chr2R 7884338 intron Dgk - chr2R_22_7880001 chr2R_7880001 RAL-913 1096 chr2R 7889274 7889324 chr2R 7891906 7891956 7 2627 32.0 28.0 30.0 0.2 2682 chr2R 7889274 intergenic not near genes chr2R 7890615 5` UTR CG30377 + chr2R 7891956 intron CG30377 + chr2R_7_7890001 chr2R_7890001 RAL-913 1097 chr2R 7901652 7901708 chr2R 7901860 7901918 21 208 10.5 11.0 10.8 1.8 266 chr2R 7901652 intron CG30377 + chr2R 7901785 intron CG30377 + chr2R 7901918 intron CG30377 + chr2R_21_7900001 chr2R_7900001 RAL-913 1098 chr2R 7915680 7915744 chr2R 7915812 7915886 33 142 11.0 13.5 12.2 2.5 206 chr2R 7915680 intron CG12159 - chr2R 7915783 intron CG12159 - chr2R 7915886 intron CG12159 - chr2R_33_7915001 chr2R_7915001 RAL-913 1099 chr2R 7997390 7997455 chr2R 7997546 7997611 28 156 4.0 11.0 7.5 3.3 221 chr2R 7997390 exon Hey - chr2R 7997500 intron Hey - chr2R 7997611 intron Hey - chr2R_28_7995001 chr2R_7995001 RAL-913 1100 chr2R 8014389 8014449 chr2R 8014524 8014584 12 131 8.0 14.5 11.2 1.0 195 chr2R 8014389 intergenic not near genes chr2R 8014486 intergenic not near genes chr2R 8014584 intergenic not near genes chr2R_12_8010001 chr2R_8010001 RAL-913 1101 chr2R 8015617 8015672 chr2R 8017683 8017745 11 2063 7.5 3.5 5.5 1.7 2128 chr2R 8015617 intergenic mir-4981 + chr2R 8016681 intergenic not near genes chr2R 8017745 intergenic not near genes chr2R_11_8015001 chr2R_8015001 RAL-913 1102 chr2R 8155561 8155609 chr2R 8155684 8155725 16 130 13.0 8.0 10.5 1.4 164 chr2R 8155561 intron,intron Lpin -,kermit - chr2R 8155643 intron,intron Lpin -,kermit - chr2R 8155725 intron,intron Lpin -,kermit - chr2R_16_8155001 chr2R_8155001 RAL-913 1103 chr2R 8157850 8157911 chr2R 8157988 8158048 25 135 4.5 8.0 6.2 3.5 198 chr2R 8157850 5` UTR CR44068 + chr2R 8157949 5` UTR CR44068 + chr2R 8158048 5` UTR CR44068 + chr2R_25_8155001 chr2R_8155001 RAL-913 1104 chr2R 8235987 8236028 chr2R 8236118 8236158 16 130 6.5 6.5 6.5 2.1 171 chr2R 8235987 intergenic not near genes chr2R 8236072 intergenic not near genes chr2R 8236158 intergenic not near genes chr2R_16_8235001 chr2R_8235001 RAL-913 1105 chr2R 8249527 8249595 chr2R 8249659 8249727 7 132 8.0 5.0 6.5 0.9 200 chr2R 8249527 5` UTR CG44439 - chr2R 8249627 intergenic CG44439 - chr2R 8249727 intergenic CG44439 - chr2R_7_8245001 chr2R_8245001 RAL-913 1106 chr2R 8252181 8252241 chr2R 8252311 8252371 18 128 6.5 6.0 6.2 2.5 190 chr2R 8252181 intergenic not near genes chr2R 8252276 intergenic not near genes chr2R 8252371 intergenic not near genes chr2R_18_8250001 chr2R_8250001 RAL-913 1107 chr2R 8297925 8297995 chr2R 8298056 8298123 14 129 10.0 11.0 10.5 1.2 198 chr2R 8297925 intergenic mir-280 + chr2R 8298024 intergenic mir-280 + chr2R 8298123 5` UTR mir-280 + chr2R_14_8295001 chr2R_8295001 RAL-913 1108 chr2R 8330816 8330886 chr2R 8331352 8331422 roo 21 536 6.0 13.5 9.8 1.9 606 chr2R 8330816 intron pdm3 + chr2R 8331119 intron pdm3 + chr2R 8331422 intron pdm3 + chr2R_21_8330001 chr2R_8330001 RAL-913 1109 chr2R 8338607 8338659 chr2R 8338737 8338791 15 132 4.5 14.0 9.2 1.5 184 chr2R 8338607 intron pdm3 + chr2R 8338699 intron pdm3 + chr2R 8338791 intron pdm3 + chr2R_15_8335001 chr2R_8335001 RAL-913 1110 chr2R 8379761 8379792 chr2R 8379907 8379938 5 146 28.0 26.5 27.2 0.2 177 chr2R 8379761 intron pdm3 + chr2R 8379850 intron pdm3 + chr2R 8379938 intron pdm3 + chr2R_5_8375001 chr2R_8375001 RAL-913 1111 chr2R 8398169 8398232 chr2R 8403000 8403063 Doc 19 4828 8.5 11.5 10.0 1.7 4894 chr2R 8398169 intron CG2121 - chr2R 8400616 intron CG2121 - chr2R 8403063 intron CG2121 - chr2R_19_8400001 chr2R_8400001 RAL-913 1112 chr2R 8408795 8408863 chr2R 8408961 8409041 21 169 12.5 11.5 12.0 1.6 246 chr2R 8408795 intron CG2121 - chr2R 8408918 intron CG2121 - chr2R 8409041 intron CG2121 - chr2R_21_8405001 chr2R_8405001 RAL-913 1113 chr2R 8419326 8419372 chr2R 8419459 8419505 7 133 28.5 28.5 28.5 0.2 179 chr2R 8419326 intergenic not near genes chr2R 8419416 intergenic not near genes chr2R 8419505 intergenic not near genes chr2R_7_8415001 chr2R_8415001 RAL-913 1114 chr2R 8451983 8452061 chr2R 8452116 8452194 23 131 10.5 14.5 12.5 1.7 211 chr2R 8451983 intergenic Mal-A1 - chr2R 8452088 intergenic Mal-A1 - chr2R 8452194 intergenic Mal-A1 - chr2R_23_8450001 chr2R_8450001 RAL-913 1115 chr2R 8483919 8483985 chr2R 8484045 8484094 12 120 10.0 9.0 9.5 1.1 175 chr2R 8483919 intron mtt - chr2R 8484006 intron mtt - chr2R 8484094 intron mtt - chr2R_12_8480001 chr2R_8480001 RAL-913 1116 chr2R 8489938 8489968 chr2R 8490074 8490104 14 136 8.5 16.5 12.5 1.0 166 chr2R 8489938 intron mtt - chr2R 8490021 intron mtt - chr2R 8490104 intron mtt - chr2R_14_8490001 chr2R_8490001 RAL-913 1117 chr2R 8490564 8490578 chr2R 8492338 8492350 Rt1c 5 1774 12.5 14.5 13.5 0.3 1786 chr2R 8490564 intron mtt - chr2R 8491457 intron mtt - chr2R 8492350 intron mtt - chr2R_5_8490001 chr2R_8490001 RAL-913 1118 chr2R 8524922 8524970 chr2R 8525111 8525159 4 189 30.0 26.0 28.0 0.1 237 chr2R 8524922 intron mtt - chr2R 8525040 intron mtt - chr2R 8525159 intron mtt - chr2R_4_8525001 chr2R_8525001 RAL-913 1119 chr2R 8536153 8536226 chr2R 8536434 8536494 32 276 10.0 7.0 8.5 3.4 341 chr2R 8536153 intergenic not near genes chr2R 8536324 intergenic not near genes chr2R 8536494 intergenic not near genes chr2R_32_8535001 chr2R_8535001 RAL-913 1120 chr2R 8539203 8539276 chr2R 8539667 8539740 20 462 13.0 14.0 13.5 1.4 537 chr2R 8539203 intergenic not near genes chr2R 8539472 intergenic not near genes chr2R 8539740 intergenic not near genes chr2R_20_8535001 chr2R_8535001 RAL-913 1121 chr2R 8564231 8564285 chr2R 8565284 8565338 4 1053 35.0 26.5 30.8 0.1 1107 chr2R 8564231 3` UTR Cyp6a14 - chr2R 8564784 intron Cyp6a14 - chr2R 8565338 exon Cyp6a14 - chr2R_4_8560001 chr2R_8560001 RAL-913 1122 chr2R 8563690 8563744 chr2R 8565941 8565995 6 2255 37.5 43.0 40.2 0.1 2305 chr2R 8563690 intergenic Cyp6a14 - chr2R 8564842 exon Cyp6a14 - chr2R 8565995 5` UTR Cyp6a14 - chr2R_6_8560001 chr2R_8560001 RAL-913 1123 chr2R 8566010 8566061 chr2R 8567006 8567057 1360 32 995 10.5 16.0 13.2 2.3 1047 chr2R 8566010 5` UTR Cyp6a14 - chr2R 8566534 5` UTR Cyp6a14 - chr2R 8567057 5` UTR Cyp6a14 - chr2R_32_8565001 chr2R_8565001 RAL-913 1124 chr2R 8612256 8612553 chr2R 8612484 8612680 22 191 16.0 19.5 17.8 1.2 424 chr2R 8612256 3` UTR,intron rgr +,CG8642 - chr2R 8612468 intron CG8642 - chr2R 8612680 intron CG8642 - chr2R_22_8610001 chr2R_8610001 RAL-913 1125 chr2R 8612557 8612606 chr2R 8612684 8612733 20 127 14.5 21.5 18.0 1.1 176 chr2R 8612557 intron CG8642 - chr2R 8612645 intron CG8642 - chr2R 8612733 intron CG8642 - chr2R_20_8610001 chr2R_8610001 RAL-913 1126 chr2R 8722720 8722795 chr2R 8723011 8723019 pogo 32 283 8.5 9.5 9.0 3.2 299 chr2R 8722720 intron CG14767 - chr2R 8722870 intron CG14767 - chr2R 8723019 intron CG14767 - chr2R_32_8720001 chr2R_8720001 RAL-913 1127 chr2R 8741290 8741355 chr2R 8741420 8741485 19 128 11.5 13.0 12.2 1.4 195 chr2R 8741290 intron CG8740 + chr2R 8741388 intron CG8740 + chr2R 8741485 intron CG8740 + chr2R_19_8740001 chr2R_8740001 RAL-913 1128 chr2R 8777875 8777946 chr2R 8784129 8784200 diver 25 6253 6.5 9.0 7.8 2.8 6325 chr2R 8777875 intergenic not near genes chr2R 8781038 intergenic not near genes chr2R 8784200 intergenic not near genes chr2R_25_8780001 chr2R_8780001 RAL-913 1129 chr2R 8850598 8850658 chr2R 8850983 8851063 12 397 9.5 9.5 9.5 1.1 465 chr2R 8850598 intron sns + chr2R 8850830 intron sns + chr2R 8851063 intron sns + chr2R_12_8850001 chr2R_8850001 RAL-913 1130 chr2R 8884876 8884938 chr2R 8888404 8888466 20 3529 55.0 67.0 61.0 0.3 3590 chr2R 8884876 exon RyR + chr2R 8886671 exon RyR + chr2R 8888466 3` UTR CG8272 - chr2R_20_8885001 chr2R_8885001 RAL-913 1131 chr2R 8924407 8924454 chr2R 8924534 8924570 25 120 8.5 11.0 9.8 2.3 163 chr2R 8924407 exon CG8243 + chr2R 8924488 exon CG8243 + chr2R 8924570 exon CG8243 + chr2R_25_8920001 chr2R_8920001 RAL-913 1132 chr2R 8967093 8967135 chr2R 8967232 8967275 5 139 40.0 35.0 37.5 0.1 182 chr2R 8967093 intron CG8216 - chr2R 8967184 intron CG8216 - chr2R 8967275 intron CG8216 - chr2R_5_8965001 chr2R_8965001 RAL-913 1133 chr2R 9065877 9065937 chr2R 9066009 9066069 8 132 30.0 35.0 32.5 0.2 192 chr2R 9065877 intron ana + chr2R 9065973 intron ana + chr2R 9066069 intron ana + chr2R_8_9065001 chr2R_9065001 RAL-913 1134 chr2R 9078440 9078491 chr2R 9078568 9078619 21 127 17.5 19.0 18.2 1.1 179 chr2R 9078440 intergenic CG8083 + chr2R 9078530 intergenic CG8083 + chr2R 9078619 intergenic CG8083 + chr2R_21_9075001 chr2R_9075001 RAL-913 1135 chr2R 9151256 9151325 chr2R 9157776 9157845 Burdock 20 6519 11.5 14.5 13.0 1.4 6589 chr2R 9151256 exon CG30345 + chr2R 9154550 intergenic not near genes chr2R 9157845 intergenic CG8008 - chr2R_20_9150001 chr2R_9150001 RAL-913 1136 chr2R 9210396 9210421 chr2R 9210522 9210558 4 134 26.0 23.0 24.5 0.2 162 chr2R 9210396 intergenic not near genes chr2R 9210477 intergenic not near genes chr2R 9210558 intergenic not near genes chr2R_4_9210001 chr2R_9210001 RAL-913 1137 chr2R 9212667 9212711 chr2R 9213189 9213232 roo 9 530 10.5 8.5 9.5 0.9 565 chr2R 9212667 intergenic CR45309 + chr2R 9212950 intergenic CR45309 + chr2R 9213232 5` UTR CR45309 + chr2R_9_9210001 chr2R_9210001 RAL-913 1138 chr2R 9214970 9215021 chr2R 9215316 9215367 7 346 11.5 13.5 12.5 0.5 397 chr2R 9214970 5` UTR CR44451 + chr2R 9215168 intergenic CR44451 + chr2R 9215367 intergenic CR44451 + chr2R_7_9215001 chr2R_9215001 RAL-913 1139 chr2R 9227264 9227324 chr2R 9227390 9227450 25 126 9.5 12.5 11.0 2.1 186 chr2R 9227264 intergenic not near genes chr2R 9227357 intergenic hig - chr2R 9227450 intergenic hig - chr2R_25_9225001 chr2R_9225001 RAL-913 1140 chr2R 9236573 9236601 chr2R 9236710 9236738 5 137 40.5 42.5 41.5 0.1 165 chr2R 9236573 intron hig - chr2R 9236656 intron hig - chr2R 9236738 intron hig - chr2R_5_9235001 chr2R_9235001 RAL-913 1141 chr2R 9237719 9237774 chr2R 9240666 9240733 4 2956 28.0 25.0 26.5 0.1 3014 chr2R 9237719 intron,exon hig -,Cyp4p2 + chr2R 9239226 intron,exon hig -,Cyp4p2 + chr2R 9240733 intron,intron hig -,Cyp4p1 + chr2R_4_9235001 chr2R_9235001 RAL-913 1142 chr2R 9330119 9330166 chr2R 9330251 9330298 8 128 9.5 16.0 12.8 0.6 179 chr2R 9330119 intron,intron CG13739 -,CG13954 - chr2R 9330208 intron,intron CG13739 -,CG13954 - chr2R 9330298 intron,intron CG13739 -,CG13954 - chr2R_8_9330001 chr2R_9330001 RAL-913 1143 chr2R 9330168 9330190 chr2R 9330245 9330307 12 98 9.0 16.0 12.5 0.9 139 chr2R 9330168 intron,intron CG13739 -,CG13954 - chr2R 9330238 intron,intron CG13739 -,CG13954 - chr2R 9330307 intron,intron CG13739 -,CG13954 - chr2R_12_9330001 chr2R_9330001 RAL-913 1144 chr2R 9368078 9368132 chr2R 9368204 9368237 12 119 8.5 0.0 4.2 2.3 159 chr2R 9368078 intron CG13954 - chr2R 9368158 intron CG13954 - chr2R 9368237 intron CG13954 - chr2R_12_9365001 chr2R_9365001 RAL-913 1145 chr2R 9390841 9390907 chr2R 9390977 9391043 26 135 11.0 9.0 10.0 2.4 202 chr2R 9390841 intron l(2)03659 + chr2R 9390942 intron l(2)03659 + chr2R 9391043 exon l(2)03659 + chr2R_26_9390001 chr2R_9390001 RAL-913 1146 chr2R 9466644 9466684 chr2R 9466758 9466815 5 123 18.0 17.0 17.5 0.3 171 chr2R 9466644 intron Camta + chr2R 9466730 intron Camta + chr2R 9466815 intron Camta + chr2R_5_9465001 chr2R_9465001 RAL-913 1147 chr2R 9480035 9480082 chr2R 9490616 9490647 roo 17 10580 11.0 10.5 10.8 1.4 10612 chr2R 9480035 intergenic not near genes chr2R 9485341 intergenic not near genes chr2R 9490647 intergenic not near genes chr2R_17_9485001 chr2R_9485001 RAL-913 1148 chr2R 9509413 9509438 chr2R 9509537 9509571 4 127 14.0 12.0 13.0 0.3 158 chr2R 9509413 intron brp + chr2R 9509492 intron brp + chr2R 9509571 intron brp + chr2R_4_9505001 chr2R_9505001 RAL-913 1149 chr2R 9510627 9510693 chr2R 9510782 9510857 17 163 7.0 8.0 7.5 2.0 230 chr2R 9510627 exon brp + chr2R 9510742 intron brp + chr2R 9510857 exon brp + chr2R_17_9510001 chr2R_9510001 RAL-913 1150 chr2R 9531901 9531909 chr2R 9532027 9532035 6 126 0.0 20.5 10.2 0.5 134 chr2R 9531901 intron brp + chr2R 9531968 intron brp + chr2R 9532035 intron brp + chr2R_6_9530001 chr2R_9530001 RAL-913 1151 chr2R 9540263 9540312 chr2R 9540394 9540443 13 129 4.0 13.0 8.5 1.4 180 chr2R 9540263 3` UTR brp + chr2R 9540353 3` UTR brp + chr2R 9540443 3` UTR brp + chr2R_13_9540001 chr2R_9540001 RAL-913 1152 chr2R 9561797 9561838 chr2R 9561934 9561976 9 138 7.0 14.5 10.8 0.8 179 chr2R 9561797 3` UTR,intron CR45281 -,CG1809 + chr2R 9561886 3` UTR,intron CR45281 -,CG1809 + chr2R 9561976 3` UTR,intron CR45281 -,CG1809 + chr2R_9_9560001 chr2R_9560001 RAL-913 1153 chr2R 9699367 9699437 chr2R 9699504 9699574 36 128 8.5 11.0 9.8 3.3 207 chr2R 9699367 intergenic not near genes chr2R 9699470 intergenic not near genes chr2R 9699574 intergenic not near genes chr2R_36_9695001 chr2R_9695001 RAL-913 1154 chr2R 9726571 9726633 chr2R 9734172 9734234 17.6 30 7601 14.0 11.5 12.8 2.2 7663 chr2R 9726571 intron sqa - chr2R 9730402 intron sqa - chr2R 9734234 intron sqa - chr2R_30_9730001 chr2R_9730001 RAL-913 1155 chr2R 9761260 9761298 chr2R 9761386 9761424 23 126 10.0 16.0 13.0 1.6 164 chr2R 9761260 intron trpl + chr2R 9761342 intron trpl + chr2R 9761424 exon trpl + chr2R_23_9760001 chr2R_9760001 RAL-913 1156 chr2R 9871000 9871066 chr2R 9871536 9871602 roo 32 535 1.0 10.0 5.5 4.9 602 chr2R 9871000 intron cbx - chr2R 9871301 intron cbx - chr2R 9871602 intron,5` UTR cbx -,CG18446 + chr2R_32_9870001 chr2R_9870001 RAL-913 1157 chr2R 9921158 9921170 chr2R 9921338 9921350 15 180 8.5 14.0 11.2 1.2 192 chr2R 9921158 intron Mef2 - chr2R 9921254 intron Mef2 - chr2R 9921350 intron Mef2 - chr2R_15_9920001 chr2R_9920001 RAL-913 1158 chr2R 9945396 9945463 chr2R 9945642 9945709 BS 37 246 8.0 5.5 6.8 4.7 313 chr2R 9945396 intron Mef2 - chr2R 9945552 intron Mef2 - chr2R 9945709 intron Mef2 - chr2R_37_9945001 chr2R_9945001 RAL-913 1159 chr2R 10017614 10017678 chr2R 10017743 10017788 33 128 11.0 8.0 9.5 3.1 174 chr2R 10017614 intron Pka-R2 - chr2R 10017701 intron Pka-R2 - chr2R 10017788 intron Pka-R2 - chr2R_33_10015001 chr2R_10015001 RAL-913 1160 chr2R 10059220 10059256 chr2R 10059659 10059695 11 438 13.0 8.0 10.5 1.0 475 chr2R 10059220 intron magu + chr2R 10059458 intron magu + chr2R 10059695 intron magu + chr2R_11_10055001 chr2R_10055001 RAL-913 1161 chr2R 10059260 10059294 chr2R 10059657 10059716 16 430 5.5 8.0 6.8 2.1 456 chr2R 10059260 intron magu + chr2R 10059488 intron magu + chr2R 10059716 intron magu + chr2R_16_10055001 chr2R_10055001 RAL-913 1162 chr2R 10086886 10086931 chr2R 10087015 10087078 24 142 8.0 6.0 7.0 3.0 192 chr2R 10086886 intron,exon CG2269 +,sut4 - chr2R 10086982 intron,5` UTR CG2269 +,sut4 - chr2R 10087078 intron,5` UTR CG2269 +,sut4 - chr2R_24_10085001 chr2R_10085001 RAL-913 1163 chr2R 10167875 10167901 chr2R 10168011 10168037 7 136 15.0 10.5 12.8 0.5 162 chr2R 10167875 intron KCNQ - chr2R 10167956 intron KCNQ - chr2R 10168037 intron KCNQ - chr2R_7_10165001 chr2R_10165001 RAL-913 1164 chr2R 10168324 10168342 chr2R 10168452 10168470 4 128 14.0 17.0 15.5 0.2 146 chr2R 10168324 intron KCNQ - chr2R 10168397 intron KCNQ - chr2R 10168470 intron KCNQ - chr2R_4_10165001 chr2R_10165001 RAL-913 1165 chr2R 10176836 10176903 chr2R 10186053 10186115 roo 38 9217 8.5 11.0 9.8 3.5 9279 chr2R 10176836 intron KCNQ - chr2R 10181476 intron KCNQ - chr2R 10186115 intron KCNQ - chr2R_38_10180001 chr2R_10180001 RAL-913 1166 chr2R 10189163 10189226 chr2R 10189291 10189354 30 128 13.5 11.5 12.5 2.2 191 chr2R 10189163 intron KCNQ - chr2R 10189258 intron KCNQ - chr2R 10189354 intron KCNQ - chr2R_30_10185001 chr2R_10185001 RAL-913 1167 chr2R 10216140 10216216 chr2R 10216268 10216298 22 122 8.5 8.5 8.5 2.3 158 chr2R 10216140 intron,intron CG12912 -,Hr46 - chr2R 10216219 intron,intron CG12912 -,Hr46 - chr2R 10216298 intron,intron CG12912 -,Hr46 - chr2R_22_10215001 chr2R_10215001 RAL-913 1168 chr2R 10257117 10257183 chr2R 10257258 10257324 27 141 8.0 0.0 4.0 5.4 207 chr2R 10257117 intron CG12911 + chr2R 10257220 intron CG12911 + chr2R 10257324 intron CG12911 + chr2R_27_10255001 chr2R_10255001 RAL-913 1169 chr2R 10290067 10290140 chr2R 10290198 10290271 34 131 7.5 4.0 5.8 5.0 204 chr2R 10290067 intron CAP + chr2R 10290169 intron CAP + chr2R 10290271 intron CAP + chr2R_34_10290001 chr2R_10290001 RAL-913 1170 chr2R 10294925 10294999 chr2R 10295086 10295150 26 159 7.5 6.0 6.8 3.3 225 chr2R 10294925 exon CAP + chr2R 10295038 intron CAP + chr2R 10295150 intron CAP + chr2R_26_10295001 chr2R_10295001 RAL-913 1171 chr2R 10313288 10313339 chr2R 10313426 10313477 22 137 0.0 12.0 6.0 3.1 189 chr2R 10313288 intergenic not near genes chr2R 10313382 intergenic not near genes chr2R 10313477 intergenic Ndg + chr2R_22_10310001 chr2R_10310001 RAL-913 1172 chr2R 10318461 10318534 chr2R 10318602 10318670 25 137 7.5 9.5 8.5 2.6 209 chr2R 10318461 exon Ndg + chr2R 10318566 intron Ndg + chr2R 10318670 intron Ndg + chr2R_25_10315001 chr2R_10315001 RAL-913 1173 chr2R 10319673 10319741 chr2R 10319815 10319883 34 141 5.5 8.0 6.8 4.4 210 chr2R 10319673 exon Ndg + chr2R 10319778 intron Ndg + chr2R 10319883 exon,3` UTR Ndg +,CG34222 - chr2R_34_10315001 chr2R_10315001 RAL-913 1174 chr2R 10352644 10352703 chr2R 10352764 10352824 25 124 13.0 14.0 13.5 1.7 180 chr2R 10352644 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352734 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352824 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_25_10350001 chr2R_10350001 RAL-913 1175 chr2R 10359331 10359345 chr2R 10359474 10359488 11 143 4.5 6.5 5.5 1.7 157 chr2R 10359331 intron CG42732 - chr2R 10359410 intron CG42732 - chr2R 10359488 intron CG42732 - chr2R_11_10355001 chr2R_10355001 RAL-913 1176 chr2R 10363838 10363890 chr2R 10363967 10364019 16 129 9.5 17.5 13.5 1.1 181 chr2R 10363838 intron CG42732 - chr2R 10363928 intron CG42732 - chr2R 10364019 intron CG42732 - chr2R_16_10360001 chr2R_10360001 RAL-913 1177 chr2R 10376682 10376867 chr2R 10376858 10377039 6 170 0.0 0.0 0.0 6.0 357 chr2R 10376682 intron CG42732 - chr2R 10376860 intron CG42732 - chr2R 10377039 intron CG42732 - chr2R_6_10375001 chr2R_10375001 RAL-913 1178 chr2R 10387981 10387984 chr2R 10388121 10388131 4 145 0.0 14.5 7.2 0.5 150 chr2R 10387981 intron CG42732 - chr2R 10388056 intron CG42732 - chr2R 10388131 intron CG42732 - chr2R_4_10385001 chr2R_10385001 RAL-913 1179 chr2R 10387985 10388000 chr2R 10388090 10388147 6 132 0.0 10.0 5.0 1.0 162 chr2R 10387985 intron CG42732 - chr2R 10388066 intron CG42732 - chr2R 10388147 intron CG42732 - chr2R_6_10385001 chr2R_10385001 RAL-913 1180 chr2R 10403473 10403541 chr2R 10403661 10403729 29 186 7.0 8.5 7.8 3.3 256 chr2R 10403473 intron CG42732 - chr2R 10403601 intron CG42732 - chr2R 10403729 intron CG42732 - chr2R_29_10400001 chr2R_10400001 RAL-913 1181 chr2R 10409010 10409079 chr2R 10409137 10409205 26 127 0.0 9.0 4.5 4.7 195 chr2R 10409010 intron CG42732 - chr2R 10409108 intron CG42732 - chr2R 10409205 intron,exon CG42732 -,CG33477 - chr2R_26_10405001 chr2R_10405001 RAL-913 1182 chr2R 10428970 10429050 chr2R 10429097 10429146 38 121 9.0 10.0 9.5 3.6 176 chr2R 10428970 intergenic not near genes chr2R 10429058 intergenic not near genes chr2R 10429146 intergenic not near genes chr2R_38_10425001 chr2R_10425001 RAL-913 1183 chr2R 10454054 10454066 chr2R 10454181 10454187 5 126 16.0 9.0 12.5 0.4 133 chr2R 10454054 intron,intron Galphao +,Cyp49a1 - chr2R 10454120 intron,intron Galphao +,Cyp49a1 - chr2R 10454187 intron,intron Galphao +,Cyp49a1 - chr2R_5_10450001 chr2R_10450001 RAL-913 1184 chr2R 10454067 10454125 chr2R 10454174 10454245 36 122 7.0 10.0 8.5 3.8 178 chr2R 10454067 intron,intron Galphao +,Cyp49a1 - chr2R 10454156 intron,intron Galphao +,Cyp49a1 - chr2R 10454245 intron,intron Galphao +,Cyp49a1 - chr2R_36_10450001 chr2R_10450001 RAL-913 1185 chr2R 10468978 10469048 chr2R 10469154 10469224 36 175 3.5 7.0 5.2 5.8 246 chr2R 10468978 intron CG11777 + chr2R 10469101 intron CG11777 + chr2R 10469224 exon CG11777 + chr2R_36_10465001 chr2R_10465001 RAL-913 1186 chr2R 10509551 10509559 chr2R 10509688 10509696 5 137 20.5 8.5 14.5 0.3 145 chr2R 10509551 intron lola - chr2R 10509624 intron lola - chr2R 10509696 intron lola - chr2R_5_10505001 chr2R_10505001 RAL-913 1187 chr2R 10562944 10562987 chr2R 10563072 10563115 11 128 3.0 0.0 1.5 4.4 171 chr2R 10562944 intron psq + chr2R 10563030 intron psq + chr2R 10563115 intron psq + chr2R_11_10560001 chr2R_10560001 RAL-913 1188 chr2R 10563227 10563249 chr2R 10563374 10563397 10 148 0.0 13.5 6.8 1.3 170 chr2R 10563227 intron psq + chr2R 10563312 intron psq + chr2R 10563397 intron psq + chr2R_10_10560001 chr2R_10560001 RAL-913 1189 chr2R 10563903 10563908 chr2R 10564144 10564149 5 241 0.0 11.0 5.5 0.8 246 chr2R 10563903 intron psq + chr2R 10564026 intron psq + chr2R 10564149 intron psq + chr2R_5_10560001 chr2R_10560001 RAL-913 1190 chr2R 10571967 10572031 chr2R 10572209 10572267 31 240 10.5 6.5 8.5 3.3 300 chr2R 10571967 intron psq + chr2R 10572117 intron psq + chr2R 10572267 intron psq + chr2R_31_10570001 chr2R_10570001 RAL-913 1191 chr2R 10577940 10577992 chr2R 10578143 10578196 29 201 11.0 11.0 11.0 2.4 256 chr2R 10577940 intron psq + chr2R 10578068 intron psq + chr2R 10578196 intron psq + chr2R_29_10575001 chr2R_10575001 RAL-913 1192 chr2R 10585511 10585587 chr2R 10594144 10594190 Tirant 5 8621 8.0 8.0 8.0 0.6 8679 chr2R 10585511 intron psq + chr2R 10589850 intron psq + chr2R 10594190 intron psq + chr2R_5_10585001 chr2R_10585001 RAL-913 1193 chr2R 10622307 10622327 chr2R 10637121 10637141 mdg1 8 14811 17.5 6.0 11.8 0.6 14834 chr2R 10622307 intron CG11883 + chr2R 10629724 intron CG11883 + chr2R 10637141 intron CG11883 + chr2R_8_10625001 chr2R_10625001 RAL-913 1194 chr2R 10757664 10757715 chr2R 10757796 10757852 30 136 0.0 10.5 5.2 4.8 188 chr2R 10757664 intron CG33144 - chr2R 10757758 intron CG33144 - chr2R 10757852 intron CG33144 - chr2R_30_10755001 chr2R_10755001 RAL-913 1195 chr2R 10758770 10758820 chr2R 10758897 10758954 29 136 5.5 7.5 6.5 3.9 184 chr2R 10758770 intron CG33144 - chr2R 10758862 intron CG33144 - chr2R 10758954 intron CG33144 - chr2R_29_10755001 chr2R_10755001 RAL-913 1196 chr2R 10761514 10761586 chr2R 10761718 10761790 35 204 7.5 6.0 6.8 4.5 276 chr2R 10761514 intron,5` UTR CG33144 -,CR43605 + chr2R 10761652 intron,5` UTR CG33144 -,CR43605 + chr2R 10761790 intron CG33144 - chr2R_35_10760001 chr2R_10760001 RAL-913 1197 chr2R 10771445 10771463 chr2R 10771576 10771594 10 131 13.0 12.0 12.5 0.7 149 chr2R 10771445 intron CG33144 - chr2R 10771520 intron CG33144 - chr2R 10771594 intron CG33144 - chr2R_10_10770001 chr2R_10770001 RAL-913 1198 chr2R 10848276 10848312 chr2R 10848429 10848463 6 153 7.0 10.0 8.5 0.6 187 chr2R 10848276 intron CG30015 - chr2R 10848370 intron CG30015 - chr2R 10848463 exon CG30015 - chr2R_6_10845001 chr2R_10845001 RAL-913 1199 chr2R 10860505 10860517 chr2R 10860631 10860643 7 126 4.0 0.0 2.0 2.3 138 chr2R 10860505 intron CG30015 - chr2R 10860574 intron CG30015 - chr2R 10860643 intron CG30015 - chr2R_7_10860001 chr2R_10860001 RAL-913 1200 chr2R 10947974 10948059 chr2R 10955576 10955598 17.6 18 7597 1.5 7.0 4.2 3.5 7624 chr2R 10947974 intergenic not near genes chr2R 10951786 intergenic not near genes chr2R 10955598 intergenic not near genes chr2R_18_10950001 chr2R_10950001 RAL-913 1201 chr2R 10959044 10959112 chr2R 10959173 10959239 22 129 0.5 11.0 5.8 3.2 195 chr2R 10959044 intergenic not near genes chr2R 10959142 intergenic not near genes chr2R 10959239 intergenic not near genes chr2R_22_10955001 chr2R_10955001 RAL-913 1202 chr2R 10979621 10979673 chr2R 10980136 10980193 297 13 517 8.0 11.0 9.5 1.2 572 chr2R 10979621 intergenic not near genes chr2R 10979907 intergenic not near genes chr2R 10980193 intergenic not near genes chr2R_13_10975001 chr2R_10975001 RAL-913 1203 chr2R 11009778 11009788 chr2R 11019002 11019012 roo 4 9224 23.0 14.0 18.5 0.2 9234 chr2R 11009778 intron luna - chr2R 11014395 intron luna - chr2R 11019012 intron luna - chr2R_4_11010001 chr2R_11010001 RAL-913 1204 chr2R 11009789 11009844 chr2R 11018998 11019053 roo 18 9217 10.5 13.0 11.8 1.4 9264 chr2R 11009789 intron luna - chr2R 11014421 intron luna - chr2R 11019053 intron luna - chr2R_18_11010001 chr2R_11010001 RAL-913 1205 chr2R 11019837 11019877 chr2R 11024950 11024993 jockey 16 5114 9.5 5.5 7.5 1.9 5156 chr2R 11019837 intron luna - chr2R 11022415 intron luna - chr2R 11024993 intron luna - chr2R_16_11020001 chr2R_11020001 RAL-913 1206 chr2R 11019879 11019901 chr2R 11024943 11024992 jockey 7 5104 6.0 3.0 4.5 1.3 5113 chr2R 11019879 intron luna - chr2R 11022436 intron luna - chr2R 11024992 intron luna - chr2R_7_11020001 chr2R_11020001 RAL-913 1207 chr2R 11025952 11025981 chr2R 11026087 11026117 10 134 16.0 6.5 11.2 0.8 165 chr2R 11025952 intron luna - chr2R 11026034 intron luna - chr2R 11026117 intron luna - chr2R_10_11025001 chr2R_11025001 RAL-913 1208 chr2R 11032596 11032663 chr2R 11032740 11032807 38 143 10.5 6.0 8.2 4.1 211 chr2R 11032596 intron luna - chr2R 11032702 intron luna - chr2R 11032807 intron luna - chr2R_38_11030001 chr2R_11030001 RAL-913 1209 chr2R 11059589 11059659 chr2R 11059717 11059787 33 126 12.5 9.5 11.0 2.8 198 chr2R 11059589 intron luna - chr2R 11059688 intron luna - chr2R 11059787 intron luna - chr2R_33_11055001 chr2R_11055001 RAL-913 1210 chr2R 11114187 11114193 chr2R 11114386 11114392 4 199 18.0 6.0 12.0 0.3 205 chr2R 11114187 intron luna - chr2R 11114290 intron luna - chr2R 11114392 intron luna - chr2R_4_11110001 chr2R_11110001 RAL-913 1211 chr2R 11133357 11133431 chr2R 11133630 11133705 14 270 4.0 5.0 4.5 2.5 348 chr2R 11133357 intergenic not near genes chr2R 11133531 intergenic not near genes chr2R 11133705 intergenic not near genes chr2R_14_11130001 chr2R_11130001 RAL-913 1212 chr2R 11144246 11144319 chr2R 11144384 11144482 15 154 0.0 0.0 0.0 15.0 236 chr2R 11144246 intron CG13229 - chr2R 11144364 intron CG13229 - chr2R 11144482 intron CG13229 - chr2R_15_11140001 chr2R_11140001 RAL-913 1213 chr2R 11161612 11161655 chr2R 11161802 11161845 22 189 5.0 9.0 7.0 2.8 233 chr2R 11161612 intron,intron CG13229 -,shn + chr2R 11161728 intron,intron CG13229 -,shn + chr2R 11161845 intron,intron CG13229 -,shn + chr2R_22_11160001 chr2R_11160001 RAL-913 1214 chr2R 11171489 11171556 chr2R 11171696 11171763 40 206 15.5 12.5 14.0 2.7 274 chr2R 11171489 intron,intron CG13229 -,shn + chr2R 11171626 intron,intron CG13229 -,shn + chr2R 11171763 intron,intron CG13229 -,shn + chr2R_40_11170001 chr2R_11170001 RAL-913 1215 chr2R 11179224 11179280 chr2R 11179360 11179416 27 135 14.0 10.0 12.0 2.1 192 chr2R 11179224 intron shn + chr2R 11179320 intron shn + chr2R 11179416 intron shn + chr2R_27_11175001 chr2R_11175001 RAL-913 1216 chr2R 11184642 11184686 chr2R 11184769 11184813 20 126 13.5 17.5 15.5 1.2 171 chr2R 11184642 intron shn + chr2R 11184728 intron shn + chr2R 11184813 intron shn + chr2R_20_11180001 chr2R_11180001 RAL-913 1217 chr2R 11207779 11207838 chr2R 11208023 11208081 BS 16 244 11.0 11.0 11.0 1.3 302 chr2R 11207779 intron shn + chr2R 11207930 intron shn + chr2R 11208081 intron shn + chr2R_16_11205001 chr2R_11205001 RAL-913 1218 chr2R 11263831 11263836 chr2R 11263996 11264002 7 166 0.0 25.5 12.8 0.5 171 chr2R 11263831 intergenic not near genes chr2R 11263916 intergenic not near genes chr2R 11264002 intergenic not near genes chr2R_7_11260001 chr2R_11260001 RAL-913 1219 chr2R 11297590 11297639 chr2R 11301961 11302010 flea 32 4370 14.5 4.0 9.2 3.1 4420 chr2R 11297590 intergenic CG42336 - chr2R 11299800 intergenic not near genes chr2R 11302010 5` UTR CG7741 + chr2R_32_11295001 chr2R_11295001 RAL-913 1220 chr2R 11344097 11344180 chr2R 11344243 11344315 13 143 0.5 8.5 4.5 2.4 218 chr2R 11344097 intergenic alphaTry - chr2R 11344206 intergenic alphaTry - chr2R 11344315 3` UTR alphaTry - chr2R_13_11340001 chr2R_11340001 RAL-913 1221 chr2R 11367660 11367664 chr2R 12699805 12699809 4 1332145 7.0 16.0 11.5 0.3 1332149 chr2R 11367660 intron CG13204 + chr2R 12033734 intergenic pds5 +,CG8321 + chr2R 12699809 intergenic wuc + chr2R_4_12030001 chr2R_12030001 RAL-913 1222 chr2R 11367980 11368055 chr2R 11368106 11368181 29 126 8.5 8.0 8.2 3.2 201 chr2R 11367980 intron CG13204 + chr2R 11368080 intron CG13204 + chr2R 11368181 intron CG13204 + chr2R_29_11365001 chr2R_11365001 RAL-913 1223 chr2R 11374332 11374347 chr2R 11374461 11374476 12 126 19.5 7.5 13.5 0.8 144 chr2R 11374332 exon CG13203 + chr2R 11374404 intron CG13203 + chr2R 11374476 intron CG13203 + chr2R_12_11370001 chr2R_11370001 RAL-913 1224 chr2R 11374351 11374407 chr2R 11374459 11374536 25 127 9.0 7.5 8.2 2.7 185 chr2R 11374351 exon CG13203 + chr2R 11374444 intron CG13203 + chr2R 11374536 intron CG13203 + chr2R_25_11370001 chr2R_11370001 RAL-913 1225 chr2R 11377213 11377290 chr2R 11377342 11377398 18 128 0.5 7.5 4.0 3.6 185 chr2R 11377213 3` UTR Tsp47F - chr2R 11377306 3` UTR Tsp47F - chr2R 11377398 3` UTR Tsp47F - chr2R_18_11375001 chr2R_11375001 RAL-913 1226 chr2R 11406748 11406751 chr2R 11406873 11406878 6 127 7.5 21.0 14.2 0.4 130 chr2R 11406748 exon CG7759 + chr2R 11406813 exon CG7759 + chr2R 11406878 exon CG7759 + chr2R_6_11405001 chr2R_11405001 RAL-913 1227 chr2R 11415474 11415543 chr2R 11418673 11418742 opus 30 3197 14.5 11.5 13.0 2.1 3268 chr2R 11415474 intron Drip - chr2R 11417108 intron Drip - chr2R 11418742 intron Drip - chr2R_30_11415001 chr2R_11415001 RAL-913 1228 chr2R 11436611 11436621 chr2R 11436767 11436777 9 156 0.0 19.5 9.8 0.8 166 chr2R 11436611 intron CG7777 + chr2R 11436694 intron CG7777 + chr2R 11436777 intron CG7777 + chr2R_9_11435001 chr2R_11435001 RAL-913 1229 chr2R 11472604 11472676 chr2R 11473851 11473923 pogo 26 1245 7.0 4.5 5.8 3.8 1319 chr2R 11472604 intergenic not near genes chr2R 11473264 intergenic not near genes chr2R 11473923 intergenic not near genes chr2R_26_11470001 chr2R_11470001 RAL-913 1230 chr2R 11480753 11480835 chr2R 11480893 11480968 16 133 0.0 6.0 3.0 4.0 215 chr2R 11480753 intron inv + chr2R 11480860 intron inv + chr2R 11480968 intron inv + chr2R_16_11480001 chr2R_11480001 RAL-913 1231 chr2R 11503066 11503089 chr2R 11503310 11503348 8 256 7.5 10.5 9.0 0.8 282 chr2R 11503066 intron inv + chr2R 11503207 intron inv + chr2R 11503348 intron inv + chr2R_8_11500001 chr2R_11500001 RAL-913 1232 chr2R 11614579 11614800 chr2R 11614717 11614938 45 138 6.5 6.5 6.5 6.0 359 chr2R 11614579 intron tou - chr2R 11614758 intron tou - chr2R 11614938 intron tou - chr2R_45_11610001 chr2R_11610001 RAL-913 1233 chr2R 11677821 11677896 chr2R 11677949 11678024 41 125 10.0 10.5 10.2 3.7 203 chr2R 11677821 intron,exon Roc2 -,Tret1-2 + chr2R 11677922 intron,3` UTR Roc2 -,Tret1-2 + chr2R 11678024 intron Roc2 - chr2R_41_11675001 chr2R_11675001 RAL-913 1234 chr2R 11724106 11724176 chr2R 11724239 11724309 19 133 11.0 7.0 9.0 1.9 203 chr2R 11724106 intron pyr + chr2R 11724208 intron pyr + chr2R 11724309 exon pyr + chr2R_19_11720001 chr2R_11720001 RAL-913 1235 chr2R 11772663 11772685 chr2R 11772790 11772812 5 127 16.5 8.5 12.5 0.4 149 chr2R 11772663 intron ths + chr2R 11772738 intron ths + chr2R 11772812 intron ths + chr2R_5_11770001 chr2R_11770001 RAL-913 1236 chr2R 11863807 11863887 chr2R 11863944 11864024 26 136 9.0 6.0 7.5 3.1 217 chr2R 11863807 intergenic CG42531 + chr2R 11863916 intergenic CG42531 + chr2R 11864024 intergenic CG42531 + chr2R_26_11860001 chr2R_11860001 RAL-913 1237 chr2R 12096787 12096853 chr2R 12097289 12097349 18 498 10.5 10.0 10.2 1.6 562 chr2R 12096787 intron jeb - chr2R 12097068 intron jeb - chr2R 12097349 intron jeb - chr2R_18_12095001 chr2R_12095001 RAL-913 1238 chr2R 12146439 12146450 chr2R 12147602 12147622 6 1169 61.5 40.0 50.8 0.1 1183 chr2R 12146439 intron,3` UTR Hen1 +,CG8878 - chr2R 12147030 intron,exon Hen1 +,CG8878 - chr2R 12147622 intron,exon Hen1 +,CG8878 - chr2R_6_12145001 chr2R_12145001 RAL-913 1239 chr2R 12146459 12146490 chr2R 12147601 12147617 13 1151 55.5 40.0 47.8 0.3 1158 chr2R 12146459 intron,3` UTR Hen1 +,CG8878 - chr2R 12147038 intron,exon Hen1 +,CG8878 - chr2R 12147617 intron,exon Hen1 +,CG8878 - chr2R_13_12145001 chr2R_12145001 RAL-913 1240 chr2R 12145920 12145961 chr2R 12148564 12148616 27 2647 58.0 56.0 57.0 0.5 2696 chr2R 12145920 exon Hen1 + chr2R 12147268 intron,intron Hen1 +,CG8878 - chr2R 12148616 intron,exon Hen1 +,CG8878 - chr2R_27_12145001 chr2R_12145001 RAL-913 1241 chr2R 12185956 12186031 chr2R 12186101 12186149 87 144 18.0 22.5 20.2 4.1 193 chr2R 12185956 intron Cyp6g1 + chr2R 12186052 intron Cyp6g1 + chr2R 12186149 intron Cyp6g1 + chr2R_87_12185001 chr2R_12185001 RAL-913 1242 chr2R 12185226 12185266 chr2R 12188101 12188141 27 2877 39.5 190.0 114.8 0.2 2915 chr2R 12185226 3` UTR,exon CG13175 +,CG33964 + chr2R 12186684 exon Cyp6g1 + chr2R 12188141 3` UTR Cyp6g1 + chr2R_27_12185001 chr2R_12185001 RAL-913 1243 chr2R 12187482 12187487 chr2R 12190048 12190053 5 2566 128.5 115.0 121.8 0.0 2571 chr2R 12187482 exon Cyp6g1 + chr2R 12188768 exon Cyp6g2 - chr2R 12190053 exon Cyp6g2 - chr2R_5_12185001 chr2R_12185001 RAL-913 1244 chr2R 12187479 12187549 chr2R 12190056 12190120 103 2577 175.5 109.5 142.5 0.7 2641 chr2R 12187479 exon Cyp6g1 + chr2R 12188800 exon Cyp6g2 - chr2R 12190120 exon Cyp6g2 - chr2R_103_12185001 chr2R_12185001 RAL-913 1245 chr2R 12217527 12217598 chr2R 12217658 12217727 32 128 4.5 5.5 5.0 5.3 200 chr2R 12217527 intergenic not near genes chr2R 12217627 intergenic not near genes chr2R 12217727 intergenic not near genes chr2R_32_12215001 chr2R_12215001 RAL-913 1246 chr2R 12363338 12363415 chr2R 12363820 12363897 26 482 8.0 7.0 7.5 3.1 559 chr2R 12363338 intergenic CG30043 + chr2R 12363618 intergenic CG30043 + chr2R 12363897 intergenic not near genes chr2R_26_12360001 chr2R_12360001 RAL-913 1247 chr2R 12474798 12474863 chr2R 12474923 12474979 19 117 9.5 8.0 8.8 1.9 181 chr2R 12474798 5` UTR Dh44-R2 + chr2R 12474888 intron Dh44-R2 + chr2R 12474979 intron Dh44-R2 + chr2R_19_12470001 chr2R_12470001 RAL-913 1248 chr2R 12481140 12481162 chr2R 12482944 12482978 roo 10 1841 5.0 13.0 9.0 1.0 1838 chr2R 12481140 exon Dh44-R2 + chr2R 12482059 intron Dh44-R2 + chr2R 12482978 intron Dh44-R2 + chr2R_10_12480001 chr2R_12480001 RAL-913 1249 chr2R 12501649 12501718 chr2R 12503860 12503922 Rt1c 10 2204 7.0 12.0 9.5 1.0 2273 chr2R 12501649 intron fdl - chr2R 12502786 intron fdl - chr2R 12503922 intron fdl - chr2R_10_12500001 chr2R_12500001 RAL-913 1250 chr2R 12565545 12565595 chr2R 12565944 12565994 15 399 0.0 9.0 4.5 2.7 449 chr2R 12565545 intergenic not near genes chr2R 12565770 intergenic Cyp301a1 + chr2R 12565994 intergenic Cyp301a1 + chr2R_15_12565001 chr2R_12565001 RAL-913 1251 chr2R 12625964 12626025 chr2R 12626155 12626210 9 190 0.0 8.0 4.0 1.8 246 chr2R 12625964 5` UTR CG17760 + chr2R 12626087 5` UTR CG17760 + chr2R 12626210 intron CG17760 + chr2R_9_12625001 chr2R_12625001 RAL-913 1252 chr2R 12627420 12627501 chr2R 12627573 12627644 15 149 0.0 7.5 3.8 3.1 224 chr2R 12627420 intron CG17760 + chr2R 12627532 intron CG17760 + chr2R 12627644 exon CG17760 + chr2R_15_12625001 chr2R_12625001 RAL-913 1253 chr2R 12669114 12669179 chr2R 12669233 12669308 23 129 10.5 10.0 10.2 2.1 194 chr2R 12669114 intron nemy - chr2R 12669211 intron nemy - chr2R 12669308 intron nemy - chr2R_23_12665001 chr2R_12665001 RAL-913 1254 chr2R 12702275 12702346 chr2R 12702406 12702478 21 131 8.0 6.0 7.0 2.6 203 chr2R 12702275 intergenic not near genes chr2R 12702376 intergenic not near genes chr2R 12702478 intergenic not near genes chr2R_21_12700001 chr2R_12700001 RAL-913 1255 chr2R 12707470 12707544 chr2R 12715886 12715960 roo 26 8416 7.5 5.0 6.2 3.6 8490 chr2R 12707470 intron CG42663 + chr2R 12711715 intron CG42663 + chr2R 12715960 intron CG42663 + chr2R_26_12710001 chr2R_12710001 RAL-913 1256 chr2R 12726278 12726344 chr2R 12726420 12726486 30 140 5.0 9.5 7.2 3.7 208 chr2R 12726278 intron CG42663 + chr2R 12726382 intron CG42663 + chr2R 12726486 intron CG42663 + chr2R_30_12725001 chr2R_12725001 RAL-913 1257 chr2R 12733800 12733811 chr2R 12733943 12733954 5 143 17.0 15.0 16.0 0.3 154 chr2R 12733800 intron CG42663 + chr2R 12733877 intron CG42663 + chr2R 12733954 intron CG42663 + chr2R_5_12730001 chr2R_12730001 RAL-913 1258 chr2R 12733813 12733847 chr2R 12733934 12733959 19 139 8.0 12.5 10.2 1.7 146 chr2R 12733813 intron CG42663 + chr2R 12733886 intron CG42663 + chr2R 12733959 intron CG42663 + chr2R_19_12730001 chr2R_12730001 RAL-913 1259 chr2R 12771135 12771186 chr2R 12771434 12771485 13 299 2.5 8.0 5.2 2.1 350 chr2R 12771135 intergenic not near genes chr2R 12771310 intergenic not near genes chr2R 12771485 intergenic not near genes chr2R_13_12770001 chr2R_12770001 RAL-913 1260 chr2R 12777763 12777777 chr2R 12777904 12777918 7 141 16.5 9.0 12.8 0.5 155 chr2R 12777763 5` UTR CR45266 + chr2R 12777840 5` UTR CR45266 + chr2R 12777918 5` UTR CR45266 + chr2R_7_12775001 chr2R_12775001 RAL-913 1261 chr2R 12789249 12789288 chr2R 12797662 12797700 roo 22 8409 13.5 6.5 10.0 2.0 8451 chr2R 12789249 intron,3` UTR sca +,CR45137 - chr2R 12793474 intron,intron sca +,CR45137 - chr2R 12797700 intron,3` UTR sca +,CR45137 - chr2R_22_12790001 chr2R_12790001 RAL-913 1262 chr2R 12789290 12789321 chr2R 12797658 12797728 roo 16 8398 6.5 6.5 6.5 2.1 8438 chr2R 12789290 intron,3` UTR sca +,CR45137 - chr2R 12793509 intron,intron sca +,CR45137 - chr2R 12797728 intron,3` UTR sca +,CR45137 - chr2R_16_12790001 chr2R_12790001 RAL-913 1263 chr2R 12819402 12819472 chr2R 12824521 12824591 jockey 30 5118 8.5 4.0 6.2 4.2 5189 chr2R 12819402 intergenic not near genes chr2R 12821996 intergenic not near genes chr2R 12824591 intergenic not near genes chr2R_30_12820001 chr2R_12820001 RAL-913 1264 chr2R 12856967 12856978 chr2R 12868321 12868332 accord 9 11354 23.0 13.0 18.0 0.5 11365 chr2R 12856967 intron CG17574 - chr2R 12862650 intron CG17574 - chr2R 12868332 intron,intron CG17574 -,CR45140 + chr2R_9_12860001 chr2R_12860001 RAL-913 1265 chr2R 12897367 12897427 chr2R 12897521 12897582 33 155 11.0 11.0 11.0 2.8 215 chr2R 12897367 intron vg + chr2R 12897474 intron vg + chr2R 12897582 intron vg + chr2R_33_12895001 chr2R_12895001 RAL-913 1266 chr2R 12950078 12950142 chr2R 12950211 12950274 12 133 4.5 0.0 2.2 3.8 196 chr2R 12950078 exon CG44251 - chr2R 12950176 intron CG44251 - chr2R 12950274 intron CG44251 - chr2R_12_12950001 chr2R_12950001 RAL-913 1267 chr2R 13043015 13043039 chr2R 13043145 13043169 8 130 0.0 5.5 2.8 2.1 154 chr2R 13043015 intergenic not near genes chr2R 13043092 intergenic not near genes chr2R 13043169 intergenic not near genes chr2R_8_13040001 chr2R_13040001 RAL-913 1268 chr2R 13053857 13053882 chr2R 13053988 13054012 5 131 5.0 15.0 10.0 0.5 155 chr2R 13053857 intergenic not near genes chr2R 13053934 intergenic not near genes chr2R 13054012 intergenic not near genes chr2R_5_13050001 chr2R_13050001 RAL-913 1269 chr2R 13136801 13136860 chr2R 13141643 13141708 Doc 28 4845 7.5 11.0 9.2 2.7 4907 chr2R 13136801 exon Cap-G + chr2R 13139254 intron Cap-G + chr2R 13141708 intron Cap-G + chr2R_28_13135001 chr2R_13135001 RAL-913 1270 chr2R 13167390 13167455 chr2R 13167534 13167605 19 145 11.0 0.0 5.5 2.9 215 chr2R 13167390 intron GLaz - chr2R 13167498 intron GLaz - chr2R 13167605 intron GLaz - chr2R_19_13165001 chr2R_13165001 RAL-913 1271 chr2R 13220538 13220560 chr2R 13220667 13220689 13 129 3.0 18.5 10.8 1.1 151 chr2R 13220538 intron CG17059 + chr2R 13220614 intron CG17059 + chr2R 13220689 intron CG17059 + chr2R_13_13220001 chr2R_13220001 RAL-913 1272 chr2R 13261105 13261172 chr2R 13261250 13261317 18 144 0.0 6.5 3.2 4.3 212 chr2R 13261105 intron CG42319 + chr2R 13261211 intron CG42319 + chr2R 13261317 intron CG42319 + chr2R_18_13260001 chr2R_13260001 RAL-913 1273 chr2R 13300055 13300099 chr2R 13300189 13300189 11 130 9.0 7.5 8.2 1.2 134 chr2R 13300055 intron CG17047 + chr2R 13300122 intron CG17047 + chr2R 13300189 intron CG17047 + chr2R_11_13300001 chr2R_13300001 RAL-913 1274 chr2R 13305450 13305511 chr2R 13305582 13305643 32 130 7.5 14.5 11.0 2.7 193 chr2R 13305450 intergenic not near genes chr2R 13305546 intergenic not near genes chr2R 13305643 intergenic not near genes chr2R_32_13305001 chr2R_13305001 RAL-913 1275 chr2R 13309616 13309683 chr2R 13309784 13309851 20 168 5.5 9.5 7.5 2.4 235 chr2R 13309616 intergenic not near genes chr2R 13309734 intergenic not near genes chr2R 13309851 intergenic not near genes chr2R_20_13305001 chr2R_13305001 RAL-913 1276 chr2R 13364678 13364726 chr2R 13364814 13364862 22 136 7.5 10.0 8.8 2.2 184 chr2R 13364678 intergenic not near genes chr2R 13364770 intergenic not near genes chr2R 13364862 intergenic not near genes chr2R_22_13360001 chr2R_13360001 RAL-913 1277 chr2R 13431443 13431517 chr2R 13431572 13431646 31 129 9.0 7.5 8.2 3.4 203 chr2R 13431443 intron CG42321 - chr2R 13431544 intron CG42321 - chr2R 13431646 intron CG42321 - chr2R_31_13430001 chr2R_13430001 RAL-913 1278 chr2R 13468841 13468869 chr2R 13468968 13468996 4 127 6.0 0.5 3.2 1.0 155 chr2R 13468841 intron arr - chr2R 13468918 intron arr - chr2R 13468996 intron arr - chr2R_4_13465001 chr2R_13465001 RAL-913 1279 chr2R 13544511 13544585 chr2R 13544637 13544711 27 126 2.0 7.0 4.5 4.9 200 chr2R 13544511 intron CG6145 - chr2R 13544611 intron CG6145 - chr2R 13544711 intron CG6145 - chr2R_27_13540001 chr2R_13540001 RAL-913 1280 chr2R 13547030 13547097 chr2R 13547276 13547342 19 245 12.0 11.0 11.5 1.5 312 chr2R 13547030 intron CG6145 - chr2R 13547186 intron CG6145 - chr2R 13547342 intron CG6145 - chr2R_19_13545001 chr2R_13545001 RAL-913 1281 chr2R 13554687 13554772 chr2R 13554829 13554907 12 137 0.0 6.0 3.0 3.0 220 chr2R 13554687 intron Roe1 + chr2R 13554797 intron Roe1 + chr2R 13554907 intron Roe1 + chr2R_12_13550001 chr2R_13550001 RAL-913 1282 chr2R 13568126 13568190 chr2R 13568259 13568321 11 131 8.0 2.5 5.2 1.8 195 chr2R 13568126 intergenic not near genes chr2R 13568224 intergenic not near genes chr2R 13568321 intergenic not near genes chr2R_11_13565001 chr2R_13565001 RAL-913 1283 chr2R 13580451 13580532 chr2R 13580852 13580891 jockey 31 395 8.5 5.5 7.0 3.9 440 chr2R 13580451 3` UTR CG6191 - chr2R 13580671 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580891 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_31_13580001 chr2R_13580001 RAL-913 1284 chr2R 13622167 13622185 chr2R 13622293 13622311 7 126 1.0 14.5 7.8 0.8 144 chr2R 13622167 intergenic not near genes chr2R 13622239 intergenic not near genes chr2R 13622311 intergenic not near genes chr2R_7_13620001 chr2R_13620001 RAL-913 1285 chr2R 13631020 13631095 chr2R 13631171 13631220 23 148 7.0 8.0 7.5 2.7 200 chr2R 13631020 intron fas + chr2R 13631120 intron fas + chr2R 13631220 intron fas + chr2R_23_13630001 chr2R_13630001 RAL-913 1286 chr2R 13663571 13663633 chr2R 13663699 13663761 24 124 12.0 10.0 11.0 2.0 190 chr2R 13663571 intron,5` UTR fas +,CG6209 - chr2R 13663666 intron fas + chr2R 13663761 intron fas + chr2R_24_13660001 chr2R_13660001 RAL-913 1287 chr2R 13684215 13684268 chr2R 13684343 13684396 35 128 14.0 9.0 11.5 2.8 181 chr2R 13684215 intron fas + chr2R 13684306 intron fas + chr2R 13684396 intron fas + chr2R_35_13680001 chr2R_13680001 RAL-913 1288 chr2R 13686664 13686678 chr2R 13686794 13686798 5 128 7.0 7.5 7.2 0.6 134 chr2R 13686664 intron fas + chr2R 13686731 intron fas + chr2R 13686798 intron fas + chr2R_5_13685001 chr2R_13685001 RAL-913 1289 chr2R 13704212 13704254 chr2R 13704352 13704394 17 139 13.0 5.5 9.2 1.7 182 chr2R 13704212 intron fas + chr2R 13704303 intron fas + chr2R 13704394 intron fas + chr2R_17_13700001 chr2R_13700001 RAL-913 1290 chr2R 13709797 13709853 chr2R 13709940 13709996 23 143 8.0 0.0 4.0 4.6 199 chr2R 13709797 intron fas + chr2R 13709896 intron fas + chr2R 13709996 intron fas + chr2R_23_13705001 chr2R_13705001 RAL-913 1291 chr2R 13719343 13719427 chr2R 13719530 13719622 30 191 2.0 4.0 3.0 7.5 279 chr2R 13719343 intron fas + chr2R 13719482 intron fas + chr2R 13719622 intron fas + chr2R_30_13715001 chr2R_13715001 RAL-913 1292 chr2R 13726256 13726267 chr2R 13726438 13726449 6 182 4.0 6.5 5.2 1.0 193 chr2R 13726256 exon fas + chr2R 13726352 intron fas + chr2R 13726449 intron fas + chr2R_6_13725001 chr2R_13725001 RAL-913 1293 chr2R 13728082 13728137 chr2R 13735792 13735847 opus 14 7710 9.0 0.0 4.5 2.5 7765 chr2R 13728082 intron fas + chr2R 13731964 intron fas + chr2R 13735847 intron fas + chr2R_14_13730001 chr2R_13730001 RAL-913 1294 chr2R 13738858 13738937 chr2R 13738999 13739078 19 141 0.0 5.0 2.5 5.4 220 chr2R 13738858 intron fas + chr2R 13738968 intron fas + chr2R 13739078 intron fas + chr2R_19_13735001 chr2R_13735001 RAL-913 1295 chr2R 13742614 13742625 chr2R 13743036 13743055 9 429 0.0 21.0 10.5 0.8 441 chr2R 13742614 intron fas + chr2R 13742834 intron fas + chr2R 13743055 intron fas + chr2R_9_13740001 chr2R_13740001 RAL-913 1296 chr2R 13768939 13768994 chr2R 13769088 13769143 27 147 11.0 10.5 10.8 2.3 204 chr2R 13768939 intergenic not near genes chr2R 13769041 intergenic not near genes chr2R 13769143 intergenic not near genes chr2R_27_13765001 chr2R_13765001 RAL-913 1297 chr2R 13790278 13790293 chr2R 13790404 13790419 9 125 19.5 1.0 10.2 0.8 141 chr2R 13790278 intergenic not near genes chr2R 13790348 intergenic not near genes chr2R 13790419 intergenic not near genes chr2R_9_13790001 chr2R_13790001 RAL-913 1298 chr2R 13793111 13793124 chr2R 13793227 13793250 8 124 14.5 7.0 10.8 0.7 139 chr2R 13793111 intergenic not near genes chr2R 13793180 intergenic not near genes chr2R 13793250 intergenic not near genes chr2R_8_13790001 chr2R_13790001 RAL-913 1299 chr2R 13793127 13793161 chr2R 13793223 13793287 25 123 6.5 7.0 6.8 3.2 160 chr2R 13793127 intergenic not near genes chr2R 13793207 intergenic not near genes chr2R 13793287 intergenic not near genes chr2R_25_13790001 chr2R_13790001 RAL-913 1300 chr2R 13817647 13817692 chr2R 13817740 13817824 19 128 3.0 1.0 2.0 6.3 177 chr2R 13817647 intron stj + chr2R 13817736 intron stj + chr2R 13817824 intron stj + chr2R_19_13815001 chr2R_13815001 RAL-913 1301 chr2R 13905564 13905623 chr2R 13907596 13907640 Rt1a 27 2029 8.5 9.5 9.0 2.7 2076 chr2R 13905564 intron shot - chr2R 13906602 intron shot - chr2R 13907640 intron shot - chr2R_27_13905001 chr2R_13905001 RAL-913 1302 chr2R 13924424 13924446 chr2R 13924591 13924613 13 167 20.0 3.5 11.8 1.0 189 chr2R 13924424 intron shot - chr2R 13924518 intron shot - chr2R 13924613 intron shot - chr2R_13_13920001 chr2R_13920001 RAL-913 1303 chr2R 13925826 13925891 chr2R 13926030 13926095 31 202 7.0 9.0 8.0 3.4 269 chr2R 13925826 intron shot - chr2R 13925960 intron shot - chr2R 13926095 intron shot - chr2R_31_13925001 chr2R_13925001 RAL-913 1304 chr2R 13942443 13942463 chr2R 13942574 13942594 10 131 6.5 9.0 7.8 1.1 151 chr2R 13942443 intergenic DJ-1alpha -,shot - chr2R 13942518 intergenic DJ-1alpha -,shot - chr2R 13942594 exon DJ-1alpha - chr2R_10_13940001 chr2R_13940001 RAL-913 1305 chr2R 14000189 14000253 chr2R 14000467 14000531 42 278 12.5 6.0 9.2 4.1 342 chr2R 14000189 intron mam + chr2R 14000360 intron mam + chr2R 14000531 intron mam + chr2R_42_14000001 chr2R_14000001 RAL-913 1306 chr2R 14037230 14037288 chr2R 14037363 14037421 10 133 6.0 12.0 9.0 1.0 191 chr2R 14037230 intron mam + chr2R 14037326 intron mam + chr2R 14037421 intron mam + chr2R_10_14035001 chr2R_14035001 RAL-913 1307 chr2R 14086609 14086659 chr2R 14086738 14086788 5 129 2.5 14.5 8.5 0.5 179 chr2R 14086609 intron Prosap - chr2R 14086698 intron Prosap - chr2R 14086788 intron Prosap - chr2R_5_14085001 chr2R_14085001 RAL-913 1308 chr2R 14168320 14168391 chr2R 14168459 14168530 30 139 11.0 10.5 10.8 2.5 210 chr2R 14168320 intergenic CG18327 +,CG18324 + chr2R 14168425 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168530 intergenic CG18324 +,CG18327 +,CR44368 - chr2R_30_14165001 chr2R_14165001 RAL-913 1309 chr2R 14175940 14176002 chr2R 14176294 14176348 25 349 5.0 6.0 5.5 3.8 408 chr2R 14175940 intron cg + chr2R 14176144 intron cg + chr2R 14176348 intron cg + chr2R_25_14175001 chr2R_14175001 RAL-913 1310 chr2R 14206575 14206592 chr2R 14206735 14206758 8 165 7.0 16.5 11.8 0.6 183 chr2R 14206575 intron Sox15 - chr2R 14206666 intron Sox15 - chr2R 14206758 intron Sox15 - chr2R_8_14205001 chr2R_14205001 RAL-913 1311 chr2R 14318131 14318202 chr2R 14318263 14318334 30 132 11.0 14.0 12.5 2.2 203 chr2R 14318131 intron Shroom + chr2R 14318232 intron Shroom + chr2R 14318334 intron Shroom + chr2R_30_14315001 chr2R_14315001 RAL-913 1312 chr2R 14318568 14318582 chr2R 14318673 14318717 4 124 12.0 0.0 6.0 0.6 149 chr2R 14318568 intron Shroom + chr2R 14318642 intron Shroom + chr2R 14318717 intron Shroom + chr2R_4_14315001 chr2R_14315001 RAL-913 1313 chr2R 14357511 14357577 chr2R 14357651 14357717 29 140 4.5 7.0 5.8 4.3 206 chr2R 14357511 intergenic CG8617 -,Arc1 - chr2R 14357614 intergenic Arc1 -,CG8617 - chr2R 14357717 intergenic Arc1 -,CG8617 - chr2R_29_14355001 chr2R_14355001 RAL-913 1314 chr2R 14393830 14393891 chr2R 14393964 14393986 26 129 8.0 8.5 8.2 2.8 156 chr2R 14393830 intergenic not near genes chr2R 14393908 intergenic not near genes chr2R 14393986 intergenic not near genes chr2R_26_14390001 chr2R_14390001 RAL-913 1315 chr2R 14467258 14467327 chr2R 14476466 14476509 roo 28 9206 6.0 13.0 9.5 2.7 9251 chr2R 14467258 intergenic not near genes chr2R 14471884 intergenic not near genes chr2R 14476509 5` UTR CR44462 + chr2R_28_14470001 chr2R_14470001 RAL-913 1316 chr2R 14497347 14497406 chr2R 14498563 14498622 1360 30 1216 10.0 12.5 11.2 2.5 1275 chr2R 14497347 3` UTR Cpsf160 - chr2R 14497984 intron Cpsf160 - chr2R 14498622 3` UTR Cpsf160 - chr2R_30_14495001 chr2R_14495001 RAL-913 1317 chr2R 14514435 14514500 chr2R 14514578 14514643 24 143 10.5 9.5 10.0 2.2 208 chr2R 14514435 intron,exon Cpr51A -,CG30197 + chr2R 14514539 intron,intron Cpr51A -,CG30197 + chr2R 14514643 intron,intron Cpr51A -,CG30197 + chr2R_24_14510001 chr2R_14510001 RAL-913 1318 chr2R 14530329 14530358 chr2R 14530467 14530497 12 139 15.0 8.5 11.8 0.9 168 chr2R 14530329 intron ttv + chr2R 14530413 intron ttv + chr2R 14530497 intron ttv + chr2R_12_14530001 chr2R_14530001 RAL-913 1319 chr2R 14530359 14530375 chr2R 14530458 14530514 4 129 12.5 6.5 9.5 0.4 155 chr2R 14530359 intron ttv + chr2R 14530436 intron ttv + chr2R 14530514 intron ttv + chr2R_4_14530001 chr2R_14530001 RAL-913 1320 chr2R 14533730 14533761 chr2R 14533862 14533872 6 129 9.0 6.0 7.5 0.7 142 chr2R 14533730 intron ttv + chr2R 14533801 intron ttv + chr2R 14533872 intron ttv + chr2R_6_14530001 chr2R_14530001 RAL-913 1321 chr2R 14533763 14533785 chr2R 14533860 14533918 6 127 4.5 6.0 5.2 1.0 155 chr2R 14533763 intron ttv + chr2R 14533840 intron ttv + chr2R 14533918 intron ttv + chr2R_6_14530001 chr2R_14530001 RAL-913 1322 chr2R 14562148 14562152 chr2R 14562271 14562285 5 130 13.5 4.0 8.8 0.5 137 chr2R 14562148 intron ttv + chr2R 14562216 intron ttv + chr2R 14562285 intron ttv + chr2R_5_14560001 chr2R_14560001 RAL-913 1323 chr2R 14565518 14565588 chr2R 14565645 14565715 29 126 12.0 9.5 10.8 2.5 197 chr2R 14565518 intron ttv + chr2R 14565616 intron ttv + chr2R 14565715 intron ttv + chr2R_29_14565001 chr2R_14565001 RAL-913 1324 chr2R 14569951 14570018 chr2R 14570379 14570431 19 440 8.0 4.5 6.2 2.6 480 chr2R 14569951 intron ttv + chr2R 14570191 intron ttv + chr2R 14570431 intron ttv + chr2R_19_14570001 chr2R_14570001 RAL-913 1325 chr2R 14657494 14657499 chr2R 14657628 14657633 4 134 12.5 1.5 7.0 0.5 139 chr2R 14657494 exon Adgf-E - chr2R 14657564 intron Adgf-E - chr2R 14657633 intron Adgf-E - chr2R_4_14655001 chr2R_14655001 RAL-913 1326 chr2R 14697786 14697850 chr2R 14697918 14697982 24 129 13.5 9.5 11.5 1.9 196 chr2R 14697786 intron mspo - chr2R 14697884 intron mspo - chr2R 14697982 intron mspo - chr2R_24_14695001 chr2R_14695001 RAL-913 1327 chr2R 14708229 14708264 chr2R 14708391 14708426 15 161 10.5 8.0 9.2 1.5 197 chr2R 14708229 intron mspo - chr2R 14708328 intron mspo - chr2R 14708426 intron mspo - chr2R_15_14705001 chr2R_14705001 RAL-913 1328 chr2R 14708269 14708297 chr2R 14708388 14708459 11 152 4.5 7.5 6.0 1.6 190 chr2R 14708269 intron mspo - chr2R 14708364 intron mspo - chr2R 14708459 intron mspo - chr2R_11_14705001 chr2R_14705001 RAL-913 1329 chr2R 14722262 14722297 chr2R 14722416 14722451 16 153 9.0 17.5 13.2 1.1 189 chr2R 14722262 intergenic not near genes chr2R 14722356 intergenic not near genes chr2R 14722451 intergenic not near genes chr2R_16_14720001 chr2R_14720001 RAL-913 1330 chr2R 14737585 14737612 chr2R 14737719 14737725 4 129 13.5 13.0 13.2 0.3 140 chr2R 14737585 3` UTR CR43428 - chr2R 14737655 3` UTR CR43428 - chr2R 14737725 3` UTR CR43428 - chr2R_4_14735001 chr2R_14735001 RAL-913 1331 chr2R 14737617 14737640 chr2R 14737715 14737765 8 125 9.5 12.5 11.0 0.7 148 chr2R 14737617 3` UTR CR43428 - chr2R 14737691 3` UTR CR43428 - chr2R 14737765 3` UTR CR43428 - chr2R_8_14735001 chr2R_14735001 RAL-913 1332 chr2R 14796817 14796827 chr2R 14796953 14796964 5 137 21.0 10.0 15.5 0.3 147 chr2R 14796817 intron kn - chr2R 14796890 intron kn - chr2R 14796964 intron kn - chr2R_5_14795001 chr2R_14795001 RAL-913 1333 chr2R 14796829 14796881 chr2R 14796946 14797017 26 129 11.0 9.0 10.0 2.4 188 chr2R 14796829 intron kn - chr2R 14796923 intron kn - chr2R 14797017 intron kn - chr2R_26_14795001 chr2R_14795001 RAL-913 1334 chr2R 14799868 14799891 chr2R 14799994 14800017 5 125 4.5 20.5 12.5 0.4 149 chr2R 14799868 intron kn - chr2R 14799942 intron kn - chr2R 14800017 intron kn - chr2R_5_14795001 chr2R_14795001 RAL-913 1335 chr2R 14803427 14803505 chr2R 14803557 14803635 20 127 1.0 8.5 4.8 3.4 208 chr2R 14803427 intron kn - chr2R 14803531 intron kn - chr2R 14803635 intron kn - chr2R_20_14800001 chr2R_14800001 RAL-913 1336 chr2R 14816062 14816122 chr2R 14816203 14816268 21 137 13.0 10.5 11.8 1.6 206 chr2R 14816062 intergenic not near genes chr2R 14816165 intergenic not near genes chr2R 14816268 intergenic not near genes chr2R_21_14815001 chr2R_14815001 RAL-913 1337 chr2R 14820868 14820872 chr2R 14820999 14821009 4 131 4.5 11.0 7.8 0.5 141 chr2R 14820868 intergenic not near genes chr2R 14820938 intergenic not near genes chr2R 14821009 intergenic not near genes chr2R_4_14820001 chr2R_14820001 RAL-913 1338 chr2R 14820873 14820927 chr2R 14820986 14821064 24 133 3.0 9.5 6.2 3.3 191 chr2R 14820873 intergenic not near genes chr2R 14820968 intergenic not near genes chr2R 14821064 intergenic not near genes chr2R_24_14820001 chr2R_14820001 RAL-913 1339 chr2R 14826349 14826364 chr2R 14826503 14826518 11 154 10.0 6.0 8.0 1.2 169 chr2R 14826349 intergenic not near genes chr2R 14826434 intergenic not near genes chr2R 14826518 intergenic not near genes chr2R_11_14825001 chr2R_14825001 RAL-913 1340 chr2R 14826376 14826386 chr2R 14826530 14826540 7 154 5.5 9.0 7.2 0.9 164 chr2R 14826376 intergenic not near genes chr2R 14826458 intergenic not near genes chr2R 14826540 intergenic not near genes chr2R_7_14825001 chr2R_14825001 RAL-913 1341 chr2R 14854989 14855135 chr2R 14855131 14855288 15 137 0.0 0.0 0.0 15.0 299 chr2R 14854989 5` UTR Ciao1 - chr2R 14855138 intergenic Ciao1 -,HPS1 + chr2R 14855288 intergenic HPS1 +,Ciao1 - chr2R_15_14855001 chr2R_14855001 RAL-913 1342 chr2R 14880802 14880875 chr2R 14881473 14881546 38 669 8.5 7.0 7.8 4.3 744 chr2R 14880802 exon Cyp6a9 - chr2R 14881174 exon Cyp6a9 - chr2R 14881546 intergenic Cyp6a9 - chr2R_38_14880001 chr2R_14880001 RAL-913 1343 chr2R 14889169 14889240 chr2R 14897827 14897890 Max-element 18 8653 8.5 0.0 4.2 3.5 8721 chr2R 14889169 intergenic Cyp6a8 - chr2R 14893530 intergenic not near genes chr2R 14897890 intergenic not near genes chr2R_18_14890001 chr2R_14890001 RAL-913 1344 chr2R 14911650 14911724 chr2R 14911823 14911897 46 173 8.5 7.0 7.8 5.2 247 chr2R 14911650 intron CG10249 - chr2R 14911774 intron CG10249 - chr2R 14911897 intron CG10249 - chr2R_46_14910001 chr2R_14910001 RAL-913 1345 chr2R 14917805 14917815 chr2R 14917940 14917950 7 134 16.5 7.0 11.8 0.5 145 chr2R 14917805 intron CG10249 - chr2R 14917878 intron CG10249 - chr2R 14917950 intron CG10249 - chr2R_7_14915001 chr2R_14915001 RAL-913 1346 chr2R 14917820 14917877 chr2R 14917933 14918012 32 133 5.0 5.5 5.2 5.2 192 chr2R 14917820 intron CG10249 - chr2R 14917916 intron CG10249 - chr2R 14918012 intron CG10249 - chr2R_32_14915001 chr2R_14915001 RAL-913 1347 chr2R 14922096 14922157 chr2R 14922222 14922238 13 123 10.5 12.5 11.5 1.0 142 chr2R 14922096 intron CG10249 - chr2R 14922167 intron CG10249 - chr2R 14922238 intron CG10249 - chr2R_13_14920001 chr2R_14920001 RAL-913 1348 chr2R 14934472 14934482 chr2R 14934614 14934624 6 142 6.5 3.0 4.8 1.0 152 chr2R 14934472 intron CG10253 - chr2R 14934548 intron CG10253 - chr2R 14934624 intron CG10253 - chr2R_6_14930001 chr2R_14930001 RAL-913 1349 chr2R 14987340 14987407 chr2R 14987533 14987600 27 194 9.0 8.0 8.5 2.8 260 chr2R 14987340 intron pcs + chr2R 14987470 intron pcs + chr2R 14987600 intron pcs + chr2R_27_14985001 chr2R_14985001 RAL-913 1350 chr2R 14993358 14993424 chr2R 14997040 14997106 28 3684 58.5 64.0 61.2 0.5 3748 chr2R 14993358 exon CG10265 - chr2R 14995232 intergenic CR43830 + chr2R 14997106 intergenic not near genes chr2R_28_14995001 chr2R_14995001 RAL-913 1351 chr2R 14998470 14998510 chr2R 14998659 14998700 20 189 6.0 10.5 8.2 2.2 230 chr2R 14998470 intergenic not near genes chr2R 14998585 intergenic not near genes chr2R 14998700 intergenic not near genes chr2R_20_14995001 chr2R_14995001 RAL-913 1352 chr2R 15003556 15003614 chr2R 15003918 15003976 35 361 0.5 12.0 6.2 4.9 420 chr2R 15003556 intergenic not near genes chr2R 15003766 intergenic not near genes chr2R 15003976 intergenic not near genes chr2R_35_15000001 chr2R_15000001 RAL-913 1353 chr2R 15004685 15004749 chr2R 15005064 15005128 jockey 34 379 16.5 12.0 14.2 2.2 443 chr2R 15004685 intergenic not near genes chr2R 15004906 intergenic not near genes chr2R 15005128 intergenic not near genes chr2R_34_15000001 chr2R_15000001 RAL-913 1354 chr2R 15015416 15015481 chr2R 15022890 15022955 mdg1 31 7473 10.0 2.5 6.2 4.3 7539 chr2R 15015416 intron hbs + chr2R 15019186 intron hbs + chr2R 15022955 intron hbs + chr2R_31_15015001 chr2R_15015001 RAL-913 1355 chr2R 15084428 15084477 chr2R 15084568 15084591 6 130 5.5 0.0 2.8 1.6 163 chr2R 15084428 intergenic not near genes chr2R 15084510 intergenic not near genes chr2R 15084591 intergenic not near genes chr2R_6_15080001 chr2R_15080001 RAL-913 1356 chr2R 15084932 15085004 chr2R 15092031 15092102 297 13 7098 6.0 8.0 7.0 1.6 7170 chr2R 15084932 intergenic not near genes chr2R 15088517 intergenic not near genes chr2R 15092102 5` UTR CR44457 + chr2R_13_15085001 chr2R_15085001 RAL-913 1357 chr2R 15094843 15094908 chr2R 15094970 15095035 25 126 8.5 11.5 10.0 2.3 192 chr2R 15094843 intergenic not near genes chr2R 15094939 intergenic not near genes chr2R 15095035 intergenic not near genes chr2R_25_15090001 chr2R_15090001 RAL-913 1358 chr2R 15119283 15119308 chr2R 15127813 15127828 Tirant 5 8526 16.0 5.0 10.5 0.4 8545 chr2R 15119283 intron chn + chr2R 15123556 intron chn + chr2R 15127828 intron chn + chr2R_5_15120001 chr2R_15120001 RAL-913 1359 chr2R 15119310 15119348 chr2R 15127802 15127866 Tirant 10 8521 7.0 4.0 5.5 1.5 8556 chr2R 15119310 intron chn + chr2R 15123588 intron chn + chr2R 15127866 intron chn + chr2R_10_15120001 chr2R_15120001 RAL-913 1360 chr2R 15133386 15133456 chr2R 15133553 15133623 28 167 6.5 5.5 6.0 4.0 237 chr2R 15133386 intron chn + chr2R 15133504 intron chn + chr2R 15133623 intron chn + chr2R_28_15130001 chr2R_15130001 RAL-913 1361 chr2R 15137951 15137993 chr2R 15138049 15138102 11 123 6.0 4.5 5.2 1.8 151 chr2R 15137951 intron chn + chr2R 15138026 intron chn + chr2R 15138102 5` UTR chn + chr2R_11_15135001 chr2R_15135001 RAL-913 1362 chr2R 15152183 15152215 chr2R 15152353 15152390 18 172 14.5 5.5 10.0 1.6 207 chr2R 15152183 intergenic not near genes chr2R 15152286 intergenic not near genes chr2R 15152390 intergenic not near genes chr2R_18_15150001 chr2R_15150001 RAL-913 1363 chr2R 15152227 15152249 chr2R 15152347 15152423 6 161 8.0 4.0 6.0 0.9 196 chr2R 15152227 intergenic not near genes chr2R 15152325 intergenic not near genes chr2R 15152423 intergenic not near genes chr2R_6_15150001 chr2R_15150001 RAL-913 1364 chr2R 15230368 15230395 chr2R 15230645 15230672 7 277 31.0 0.0 15.5 0.4 304 chr2R 15230368 intron,5` UTR Fs -,CR44370 + chr2R 15230520 intron,5` UTR Fs -,CR44370 + chr2R 15230672 intron,5` UTR Fs -,CR44370 + chr2R_7_15230001 chr2R_15230001 RAL-913 1365 chr2R 15230353 15230363 chr2R 15231008 15231018 10 655 38.0 3.0 20.5 0.5 665 chr2R 15230353 intron,5` UTR Fs -,CR44370 + chr2R 15230686 intron,5` UTR Fs -,CR44370 + chr2R 15231018 intron,5` UTR Fs -,CR44370 + chr2R_10_15230001 chr2R_15230001 RAL-913 1366 chr2R 15296112 15296138 chr2R 15296245 15296271 9 132 13.5 5.5 9.5 0.9 159 chr2R 15296112 intron Trpm - chr2R 15296192 intron Trpm - chr2R 15296271 intron Trpm - chr2R_9_15295001 chr2R_15295001 RAL-913 1367 chr2R 15296140 15296172 chr2R 15296243 15296305 13 130 4.5 5.5 5.0 2.2 165 chr2R 15296140 intron Trpm - chr2R 15296222 intron Trpm - chr2R 15296305 intron Trpm - chr2R_13_15295001 chr2R_15295001 RAL-913 1368 chr2R 15330165 15330239 chr2R 15330349 15330413 31 184 0.5 7.5 4.0 6.2 248 chr2R 15330165 intergenic CR44371 - chr2R 15330289 intergenic CR44371 - chr2R 15330413 3` UTR CR44371 - chr2R_31_15330001 chr2R_15330001 RAL-913 1369 chr2R 15340647 15340664 chr2R 15349278 15349297 Tirant 10 8632 17.5 9.0 13.2 0.7 8650 chr2R 15340647 intron unc-5 + chr2R 15344972 intron unc-5 + chr2R 15349297 intron unc-5 + chr2R_10_15340001 chr2R_15340001 RAL-913 1370 chr2R 15375026 15375043 chr2R 15375186 15375201 8 159 10.0 0.0 5.0 1.3 175 chr2R 15375026 intergenic not near genes chr2R 15375114 intergenic not near genes chr2R 15375201 intergenic not near genes chr2R_8_15375001 chr2R_15375001 RAL-913 1371 chr2R 15450943 15450966 chr2R 15451086 15451111 6 143 8.0 8.5 8.2 0.7 168 chr2R 15450943 intron CG43729 + chr2R 15451027 intron CG43729 + chr2R 15451111 intron CG43729 + chr2R_6_15450001 chr2R_15450001 RAL-913 1372 chr2R 15450972 15451008 chr2R 15451081 15451153 28 133 3.5 8.5 6.0 4.0 181 chr2R 15450972 intron CG43729 + chr2R 15451062 intron CG43729 + chr2R 15451153 intron CG43729 + chr2R_28_15450001 chr2R_15450001 RAL-913 1373 chr2R 15462086 15462156 chr2R 15462369 15462432 27 277 61.5 64.0 62.8 0.4 346 chr2R 15462086 intron CG43729 + chr2R 15462259 intron CG43729 + chr2R 15462432 intron CG43729 + chr2R_27_15460001 chr2R_15460001 RAL-913 1374 chr2R 15472023 15472056 chr2R 15472157 15472190 6 131 0.0 15.5 7.8 0.7 167 chr2R 15472023 intergenic CG43729 +,CG8180 - chr2R 15472106 intergenic CG8180 -,CG43729 + chr2R 15472190 3` UTR CG8180 - chr2R_6_15470001 chr2R_15470001 RAL-913 1375 chr2R 15538286 15538331 chr2R 15538403 15538421 13 124 4.5 4.5 4.5 2.4 135 chr2R 15538286 5` UTR CG30467 + chr2R 15538354 exon CG30467 + chr2R 15538421 exon CG30467 + chr2R_13_15535001 chr2R_15535001 RAL-913 1376 chr2R 15645630 15645705 chr2R 15645775 15645851 23 140 1.0 0.0 0.5 15.3 221 chr2R 15645630 intron CG42524 + chr2R 15645740 intron CG42524 + chr2R 15645851 intron CG42524 + chr2R_23_15645001 chr2R_15645001 RAL-913 1377 chr2R 15656011 15656063 chr2R 15656152 15656204 15 141 0.0 10.5 5.2 2.4 193 chr2R 15656011 intron CG42524 + chr2R 15656108 intron CG42524 + chr2R 15656204 intron CG42524 + chr2R_15_15655001 chr2R_15655001 RAL-913 1378 chr2R 15685333 15685395 chr2R 15685486 15685548 22 153 4.0 12.5 8.2 2.4 215 chr2R 15685333 intron,exon Ranbp11 +,CG30082 - chr2R 15685440 intron,intron Ranbp11 +,CG30082 - chr2R 15685548 intron,exon Ranbp11 +,CG30082 - chr2R_22_15685001 chr2R_15685001 RAL-913 1379 chr2R 15702915 15702972 chr2R 15703042 15703098 24 126 9.5 6.0 7.8 2.7 183 chr2R 15702915 intergenic not near genes chr2R 15703006 intergenic not near genes chr2R 15703098 intergenic not near genes chr2R_24_15700001 chr2R_15700001 RAL-913 1380 chr2R 15714628 15714676 chr2R 15714784 15714836 7 159 8.5 8.0 8.2 0.8 208 chr2R 15714628 intergenic not near genes chr2R 15714732 intergenic not near genes chr2R 15714836 intergenic not near genes chr2R_7_15710001 chr2R_15710001 RAL-913 1381 chr2R 15786528 15786535 chr2R 15786652 15786662 6 126 12.0 26.0 19.0 0.3 134 chr2R 15786528 intron Zasp52 - chr2R 15786595 intron Zasp52 - chr2R 15786662 intron Zasp52 - chr2R_6_15785001 chr2R_15785001 RAL-913 1382 chr2R 15794806 15794901 chr2R 15794960 15795041 21 142 0.0 0.0 0.0 21.0 235 chr2R 15794806 intron,5` UTR Zasp52 -,tun + chr2R 15794924 intron,5` UTR Zasp52 -,tun + chr2R 15795041 intron,intron Zasp52 -,tun + chr2R_21_15790001 chr2R_15790001 RAL-913 1383 chr2R 15818898 15818965 chr2R 15819035 15819102 29 137 9.5 8.5 9.0 2.9 204 chr2R 15818898 intron tun + chr2R 15819000 intron tun + chr2R 15819102 intron tun + chr2R_29_15815001 chr2R_15815001 RAL-913 1384 chr2R 15869285 15869363 chr2R 15869415 15869493 20 128 5.5 9.5 7.5 2.4 208 chr2R 15869285 intergenic Rif1 -,sli - chr2R 15869389 intergenic sli -,Rif1 - chr2R 15869493 intergenic sli -,Rif1 - chr2R_20_15865001 chr2R_15865001 RAL-913 1385 chr2R 15891769 15891835 chr2R 15891895 15891961 23 126 9.5 10.5 10.0 2.1 192 chr2R 15891769 intron sli - chr2R 15891865 intron sli - chr2R 15891961 intron sli - chr2R_23_15890001 chr2R_15890001 RAL-913 1386 chr2R 16054913 16054958 chr2R 16055046 16055050 10 126 10.0 17.5 13.8 0.7 137 chr2R 16054913 intron CG8405 + chr2R 16054982 intron CG8405 + chr2R 16055050 intron CG8405 + chr2R_10_16050001 chr2R_16050001 RAL-913 1387 chr2R 16057712 16057724 chr2R 16057839 16057851 7 127 8.5 22.5 15.5 0.4 139 chr2R 16057712 intron CG8405 + chr2R 16057782 intron CG8405 + chr2R 16057851 intron CG8405 + chr2R_7_16055001 chr2R_16055001 RAL-913 1388 chr2R 16061673 16061711 chr2R 16064359 16064396 Burdock 13 2685 14.0 7.0 10.5 1.1 2723 chr2R 16061673 intergenic not near genes chr2R 16063034 intergenic not near genes chr2R 16064396 intergenic not near genes chr2R_13_16060001 chr2R_16060001 RAL-913 1389 chr2R 16119845 16119860 chr2R 16120019 16120034 4 174 19.5 11.5 15.5 0.2 189 chr2R 16119845 5` UTR Jhe + chr2R 16119940 intron Jhe + chr2R 16120034 intron Jhe + chr2R_4_16115001 chr2R_16115001 RAL-913 1390 chr2R 16119864 16119911 chr2R 16120013 16120085 20 167 6.0 10.0 8.0 2.2 221 chr2R 16119864 5` UTR Jhe + chr2R 16119974 intron Jhe + chr2R 16120085 intron Jhe + chr2R_20_16115001 chr2R_16115001 RAL-913 1391 chr2R 16139159 16139230 chr2R 16139360 16139429 20 200 8.5 5.0 6.8 2.6 270 chr2R 16139159 intron Got1 + chr2R 16139294 intron Got1 + chr2R 16139429 intron Got1 + chr2R_20_16135001 chr2R_16135001 RAL-913 1392 chr2R 16245590 16245655 chr2R 16245726 16245793 39 137 9.5 8.0 8.8 4.0 203 chr2R 16245590 intron CngA - chr2R 16245692 intron CngA - chr2R 16245793 intron CngA - chr2R_39_16245001 chr2R_16245001 RAL-913 1393 chr2R 16352816 16352866 chr2R 16352949 16352999 17 133 10.0 11.5 10.8 1.4 183 chr2R 16352816 intergenic not near genes chr2R 16352908 intergenic not near genes chr2R 16352999 intergenic not near genes chr2R_17_16350001 chr2R_16350001 RAL-913 1394 chr2R 16429224 16429274 chr2R 16429340 16429394 11 105 4.0 12.0 8.0 1.2 170 chr2R 16429224 intron Sema-2b + chr2R 16429309 intron Sema-2b + chr2R 16429394 intron Sema-2b + chr2R_11_16425001 chr2R_16425001 RAL-913 1395 chr2R 16449270 16449335 chr2R 16449567 16449632 29 295 5.5 5.0 5.2 4.7 362 chr2R 16449270 intergenic not near genes chr2R 16449451 intergenic not near genes chr2R 16449632 intergenic not near genes chr2R_29_16445001 chr2R_16445001 RAL-913 1396 chr2R 16538041 16538093 chr2R 16538185 16538235 21 144 11.0 8.0 9.5 2.0 194 chr2R 16538041 intergenic not near genes chr2R 16538138 intergenic not near genes chr2R 16538235 intergenic not near genes chr2R_21_16535001 chr2R_16535001 RAL-913 1397 chr2R 16539597 16539657 chr2R 16544856 16544916 copia 29 5258 12.5 10.5 11.5 2.3 5319 chr2R 16539597 intergenic not near genes chr2R 16542256 intergenic not near genes chr2R 16544916 intergenic not near genes chr2R_29_16540001 chr2R_16540001 RAL-913 1398 chr2R 16610989 16611069 chr2R 16611118 16611198 43 129 9.0 8.5 8.8 4.4 209 chr2R 16610989 intron CG5065 + chr2R 16611094 intron CG5065 + chr2R 16611198 intron CG5065 + chr2R_43_16610001 chr2R_16610001 RAL-913 1399 chr2R 16689124 16689173 chr2R 16689481 16689552 6 364 32.5 39.5 36.0 0.2 428 chr2R 16689124 intron CG30463 - chr2R 16689338 intron CG30463 - chr2R 16689552 intron CG30463 - chr2R_6_16685001 chr2R_16685001 RAL-913 1400 chr2R 16708945 16709002 chr2R 16709091 16709148 15 146 17.5 18.0 17.8 0.8 203 chr2R 16708945 intron CG30463 - chr2R 16709046 intron CG30463 - chr2R 16709148 intron CG30463 - chr2R_15_16705001 chr2R_16705001 RAL-913 1401 chr2R 16713054 16713064 chr2R 16713187 16713198 4 134 0.0 24.0 12.0 0.3 144 chr2R 16713054 intron CG30463 - chr2R 16713126 intron CG30463 - chr2R 16713198 intron CG30463 - chr2R_4_16710001 chr2R_16710001 RAL-913 1402 chr2R 16732575 16732641 chr2R 16732712 16732737 15 133 15.0 16.0 15.5 0.9 162 chr2R 16732575 5` UTR CG30463 - chr2R 16732656 5` UTR CG30463 - chr2R 16732737 5` UTR CG30463 - chr2R_15_16730001 chr2R_16730001 RAL-913 1403 chr2R 16732816 16732862 chr2R 16733036 16733082 9 220 36.5 15.0 25.8 0.3 266 chr2R 16732816 5` UTR CG30463 - chr2R 16732949 intergenic CG30463 - chr2R 16733082 intergenic CG30463 - chr2R_9_16730001 chr2R_16730001 RAL-913 1404 chr2R 16737086 16737161 chr2R 16737236 16737292 35 147 8.5 7.0 7.8 4.0 206 chr2R 16737086 3` UTR CG43104 - chr2R 16737189 3` UTR CG43104 - chr2R 16737292 exon CG43104 - chr2R_35_16735001 chr2R_16735001 RAL-913 1405 chr2R 16739433 16739446 chr2R 16739566 16739579 5 133 18.5 13.5 16.0 0.3 146 chr2R 16739433 intergenic not near genes chr2R 16739506 intergenic not near genes chr2R 16739579 intergenic not near genes chr2R_5_16735001 chr2R_16735001 RAL-913 1406 chr2R 16787427 16787496 chr2R 16787559 16787628 7 132 2.0 5.0 3.5 1.6 201 chr2R 16787427 intron CG5522 + chr2R 16787528 intron CG5522 + chr2R 16787628 intron CG5522 + chr2R_7_16785001 chr2R_16785001 RAL-913 1407 chr2R 16910181 16910247 chr2R 16910330 16910396 5 149 17.5 32.0 24.8 0.2 215 chr2R 16910181 intergenic not near genes chr2R 16910288 intergenic not near genes chr2R 16910396 intergenic not near genes chr2R_5_16910001 chr2R_16910001 RAL-913 1408 chr2R 16918189 16918233 chr2R 16918315 16918360 5 126 34.0 24.5 29.2 0.2 171 chr2R 16918189 intergenic not near genes chr2R 16918274 intergenic not near genes chr2R 16918360 intergenic not near genes chr2R_5_16915001 chr2R_16915001 RAL-913 1409 chr2R 16930608 16930626 chr2R 16930736 16930754 8 128 11.5 30.0 20.8 0.4 146 chr2R 16930608 intron Pkc53E + chr2R 16930681 intron Pkc53E + chr2R 16930754 intron Pkc53E + chr2R_8_16930001 chr2R_16930001 RAL-913 1410 chr2R 16931453 16931461 chr2R 16931685 16931688 4 230 24.0 17.5 20.8 0.2 235 chr2R 16931453 intron Pkc53E + chr2R 16931570 intron Pkc53E + chr2R 16931688 intron Pkc53E + chr2R_4_16930001 chr2R_16930001 RAL-913 1411 chr2R 16931469 16931523 chr2R 16931679 16931736 12 225 17.0 16.5 16.8 0.7 267 chr2R 16931469 intron Pkc53E + chr2R 16931602 intron Pkc53E + chr2R 16931736 intron Pkc53E + chr2R_12_16930001 chr2R_16930001 RAL-913 1412 chr2R 16962671 16962708 chr2R 16963074 16963111 9 403 31.0 27.5 29.2 0.3 440 chr2R 16962671 intergenic not near genes chr2R 16962891 intergenic not near genes chr2R 16963111 intergenic not near genes chr2R_9_16960001 chr2R_16960001 RAL-913 1413 chr2R 16975154 16975222 chr2R 16975281 16975349 23 127 6.5 11.0 8.8 2.3 195 chr2R 16975154 intron Cbp53E + chr2R 16975252 intron Cbp53E + chr2R 16975349 intron Cbp53E + chr2R_23_16975001 chr2R_16975001 RAL-913 1414 chr2R 16981993 16982095 chr2R 16982181 16982223 5 164 22.5 38.5 30.5 0.2 230 chr2R 16981993 intron Cbp53E + chr2R 16982108 intron Cbp53E + chr2R 16982223 intron Cbp53E + chr2R_5_16980001 chr2R_16980001 RAL-913 1415 chr2R 17077880 17077982 chr2R 17078008 17078109 18 127 13.0 11.5 12.2 1.4 229 chr2R 17077880 intron CG30460 - chr2R 17077994 intron CG30460 - chr2R 17078109 intron CG30460 - chr2R_18_17075001 chr2R_17075001 RAL-913 1416 chr2R 17079029 17079086 chr2R 17079161 17079195 7 128 33.5 32.0 32.8 0.2 166 chr2R 17079029 intron CG30460 - chr2R 17079112 intron CG30460 - chr2R 17079195 intron CG30460 - chr2R_7_17075001 chr2R_17075001 RAL-913 1417 chr2R 17097509 17097547 chr2R 17097616 17097674 7 124 28.0 24.0 26.0 0.3 165 chr2R 17097509 5` UTR GstS1 - chr2R 17097592 intron GstS1 - chr2R 17097674 intron GstS1 - chr2R_7_17095001 chr2R_17095001 RAL-913 1418 chr2R 17098626 17098645 chr2R 17098765 17098784 4 139 39.5 29.5 34.5 0.1 158 chr2R 17098626 intergenic GstS1 - chr2R 17098705 intergenic GstS1 - chr2R 17098784 intergenic GstS1 - chr2R_4_17095001 chr2R_17095001 RAL-913 1419 chr2R 17132816 17132865 chr2R 17132966 17133015 8 150 35.0 28.5 31.8 0.2 199 chr2R 17132816 intergenic not near genes chr2R 17132916 intergenic not near genes chr2R 17133015 intergenic Acp54A1 + chr2R_8_17130001 chr2R_17130001 RAL-913 1420 chr2R 17147197 17147262 chr2R 17152278 17152343 jockey 27 5081 12.0 10.5 11.2 2.2 5146 chr2R 17147197 intergenic not near genes chr2R 17149770 intergenic not near genes chr2R 17152343 intergenic not near genes chr2R_27_17145001 chr2R_17145001 RAL-913 1421 chr2R 17157017 17157090 chr2R 17157170 17157243 25 151 18.5 17.5 18.0 1.3 226 chr2R 17157017 3` UTR,3` UTR CG17290 +,CG17287 - chr2R 17157130 3` UTR CG17287 - chr2R 17157243 exon CG17287 - chr2R_25_17155001 chr2R_17155001 RAL-913 1422 chr2R 17161124 17161192 chr2R 17161259 17161327 9 135 34.5 35.5 35.0 0.2 203 chr2R 17161124 intergenic CG30457 - chr2R 17161226 intergenic CG30457 - chr2R 17161327 intergenic CG30457 - chr2R_9_17160001 chr2R_17160001 RAL-913 1423 chr2R 17161306 17161361 chr2R 17161562 17161615 8 254 17.0 4.5 10.8 0.7 309 chr2R 17161306 intergenic CG30457 - chr2R 17161460 intergenic not near genes chr2R 17161615 intergenic not near genes chr2R_8_17160001 chr2R_17160001 RAL-913 1424 chr2R 17165701 17165709 chr2R 17165912 17165920 4 211 21.5 11.0 16.2 0.2 219 chr2R 17165701 exon CG10953 - chr2R 17165810 exon CG10953 - chr2R 17165920 exon CG10953 - chr2R_4_17165001 chr2R_17165001 RAL-913 1425 chr2R 17165719 17165749 chr2R 17165900 17165917 6 183 11.5 10.0 10.8 0.5 198 chr2R 17165719 exon CG10953 - chr2R 17165818 exon CG10953 - chr2R 17165917 exon CG10953 - chr2R_6_17165001 chr2R_17165001 RAL-913 1426 chr2R 17166576 17166648 chr2R 17166703 17166775 4 127 33.0 30.5 31.8 0.1 199 chr2R 17166576 5` UTR CG10953 - chr2R 17166676 intergenic CG10953 - chr2R 17166775 intergenic CG10953 - chr2R_4_17165001 chr2R_17165001 RAL-913 1427 chr2R 17176355 17176377 chr2R 17182595 17182617 diver 16 6240 0.0 19.0 9.5 1.5 6262 chr2R 17176355 intergenic not near genes chr2R 17179486 intergenic not near genes chr2R 17182617 intergenic not near genes chr2R_16_17175001 chr2R_17175001 RAL-913 1428 chr2R 17208851 17208884 chr2R 17208978 17209011 5 127 17.5 20.0 18.8 0.3 160 chr2R 17208851 intergenic not near genes chr2R 17208931 intergenic not near genes chr2R 17209011 intergenic not near genes chr2R_5_17205001 chr2R_17205001 RAL-913 1429 chr2R 17236465 17236525 chr2R 17241719 17241728 copia 26 5252 10.5 6.5 8.5 2.7 5263 chr2R 17236465 intron mbl + chr2R 17239096 intron mbl + chr2R 17241728 intron mbl + chr2R_26_17235001 chr2R_17235001 RAL-913 1430 chr2R 17242792 17242840 chr2R 17242963 17243022 7 180 15.0 12.0 13.5 0.5 230 chr2R 17242792 intron mbl + chr2R 17242907 intron mbl + chr2R 17243022 intron mbl + chr2R_7_17240001 chr2R_17240001 RAL-913 1431 chr2R 17289844 17289901 chr2R 17290038 17290095 11 194 18.5 18.5 18.5 0.6 251 chr2R 17289844 intron mbl + chr2R 17289970 intron mbl + chr2R 17290095 intron mbl + chr2R_11_17285001 chr2R_17285001 RAL-913 1432 chr2R 17419889 17419963 chr2R 17420023 17420091 6 133 8.5 12.0 10.2 0.5 202 chr2R 17419889 5` UTR cnk - chr2R 17419990 5` UTR cnk - chr2R 17420091 intergenic cnk -,l(2)k01209 + chr2R_6_17415001 chr2R_17415001 RAL-913 1433 chr2R 17443735 17443792 chr2R 17443861 17443918 6 126 37.0 40.0 38.5 0.2 183 chr2R 17443735 intron EDTP - chr2R 17443826 intron EDTP - chr2R 17443918 intron EDTP - chr2R_6_17440001 chr2R_17440001 RAL-913 1434 chr2R 17458961 17459030 chr2R 17459096 17459165 29 135 10.5 7.5 9.0 2.9 204 chr2R 17458961 intron CG14478 + chr2R 17459063 intron CG14478 + chr2R 17459165 intron CG14478 + chr2R_29_17455001 chr2R_17455001 RAL-913 1435 chr2R 17485873 17485947 chr2R 17490693 17490765 F-element 24 4818 13.0 6.5 9.8 2.2 4892 chr2R 17485873 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488319 intron NT5E-2 + chr2R 17490765 intron NT5E-2 + chr2R_24_17485001 chr2R_17485001 RAL-913 1436 chr2R 17505945 17506019 chr2R 17506071 17506133 16 124 15.5 13.0 14.2 1.1 188 chr2R 17505945 exon CG43164 + chr2R 17506039 intron CG43164 + chr2R 17506133 intron CG43164 + chr2R_16_17505001 chr2R_17505001 RAL-913 1437 chr2R 17530567 17530641 chr2R 17530695 17530769 7 128 37.0 36.0 36.5 0.2 202 chr2R 17530567 intron Patronin - chr2R 17530668 intron Patronin - chr2R 17530769 intron Patronin - chr2R_7_17530001 chr2R_17530001 RAL-913 1438 chr2R 17556392 17556457 chr2R 17556528 17556592 27 135 9.5 7.0 8.2 2.9 200 chr2R 17556392 intergenic MESR4 + chr2R 17556492 intergenic MESR4 + chr2R 17556592 intergenic MESR4 +,Klp54D + chr2R_27_17555001 chr2R_17555001 RAL-913 1439 chr2R 17561573 17561613 chr2R 17561702 17561719 4 122 28.0 29.0 28.5 0.1 146 chr2R 17561573 exon Klp54D + chr2R 17561646 intron Klp54D + chr2R 17561719 exon Klp54D + chr2R_4_17560001 chr2R_17560001 RAL-913 1440 chr2R 17581704 17581779 chr2R 17581844 17581919 28 140 13.0 11.5 12.2 2.1 215 chr2R 17581704 intergenic Dcr-2 -,CG6484 - chr2R 17581812 intergenic CG6484 -,Dcr-2 - chr2R 17581919 intergenic CG6484 -,Dcr-2 - chr2R_28_17580001 chr2R_17580001 RAL-913 1441 chr2R 17616949 17617007 chr2R 17617076 17617131 9 128 30.0 27.0 28.5 0.3 182 chr2R 17616949 intron,3` UTR CG10936 -,CG44403 - chr2R 17617040 intron,3` UTR CG10936 -,CG44403 - chr2R 17617131 intron,3` UTR CG10936 -,CG44403 - chr2R_9_17615001 chr2R_17615001 RAL-913 1442 chr2R 17629556 17629625 chr2R 17629685 17629754 27 127 12.5 12.0 12.2 2.0 198 chr2R 17629556 intron,intron CG10936 -,rhi - chr2R 17629655 intron,intron CG10936 -,rhi - chr2R 17629754 intron,intron CG10936 -,rhi - chr2R_27_17625001 chr2R_17625001 RAL-913 1443 chr2R 17655157 17655229 chr2R 17655284 17655340 21 121 16.0 14.0 15.0 1.3 183 chr2R 17655157 intron CCHa1-R - chr2R 17655248 intron CCHa1-R - chr2R 17655340 intron CCHa1-R - chr2R_21_17655001 chr2R_17655001 RAL-913 1444 chr2R 17679569 17679599 chr2R 17679746 17679776 8 177 3.0 17.0 10.0 0.7 207 chr2R 17679569 intron Sema-1b - chr2R 17679672 intron Sema-1b - chr2R 17679776 intron Sema-1b - chr2R_8_17675001 chr2R_17675001 RAL-913 1445 chr2R 17703161 17703236 chr2R 17703291 17703366 37 130 17.5 13.5 15.5 2.2 205 chr2R 17703161 intron,5` UTR Uhg1 +,snoRNA:Me18S-A28a + chr2R 17703264 5` UTR Uhg1 + chr2R 17703366 3` UTR CG6424 - chr2R_37_17700001 chr2R_17700001 RAL-913 1446 chr2R 17709636 17709691 chr2R 17709772 17709827 26 136 6.0 5.5 5.8 3.8 191 chr2R 17709636 intron CG6424 - chr2R 17709732 intron CG6424 - chr2R 17709827 intron CG6424 - chr2R_26_17705001 chr2R_17705001 RAL-913 1447 chr2R 17709948 17710097 chr2R 17710089 17710225 17 143 12.0 7.0 9.5 1.6 277 chr2R 17709948 intron CG6424 - chr2R 17710086 intron CG6424 - chr2R 17710225 intron CG6424 - chr2R_17_17710001 chr2R_17710001 RAL-913 1448 chr2R 17722057 17722072 chr2R 17722187 17722202 13 130 6.5 20.0 13.2 0.9 145 chr2R 17722057 intergenic CG10934 + chr2R 17722130 intergenic CG10934 + chr2R 17722202 intergenic CG10934 + chr2R_13_17720001 chr2R_17720001 RAL-913 1449 chr2R 17724793 17724836 chr2R 17724927 17724956 7 128 33.5 19.5 26.5 0.3 163 chr2R 17724793 exon CG10933 + chr2R 17724874 3` UTR CG10933 + chr2R 17724956 3` UTR CG10933 + chr2R_7_17720001 chr2R_17720001 RAL-913 1450 chr2R 17760720 17760763 chr2R 17760871 17760912 6 151 19.5 28.0 23.8 0.2 192 chr2R 17760720 intergenic HLH54F +,CG5009 + chr2R 17760816 intergenic CG5009 +,HLH54F + chr2R 17760912 intergenic CG5009 +,HLH54F + chr2R_6_17760001 chr2R_17760001 RAL-913 1451 chr2R 17782315 17782387 chr2R 17783568 17783640 pogo 25 1252 6.0 1.5 3.8 5.2 1325 chr2R 17782315 intergenic CG33981 -,fab1 - chr2R 17782978 intergenic not near genes chr2R 17783640 intergenic mir-31a - chr2R_25_17780001 chr2R_17780001 RAL-913 1452 chr2R 17783980 17784053 chr2R 17784271 17784344 pogo 18 289 8.5 9.5 9.0 1.8 364 chr2R 17783980 intergenic mir-31a - chr2R 17784162 intergenic mir-31a - chr2R 17784344 intergenic mir-31a - chr2R_18_17780001 chr2R_17780001 RAL-913 1453 chr2R 17798385 17798414 chr2R 17798911 17798941 297 7 522 9.0 10.0 9.5 0.7 556 chr2R 17798385 intron Dhit + chr2R 17798663 intron Dhit + chr2R 17798941 3` UTR Dhit + chr2R_7_17795001 chr2R_17795001 RAL-913 1454 chr2R 17800599 17800619 chr2R 17800725 17800745 5 126 41.5 35.5 38.5 0.1 146 chr2R 17800599 3` UTR Dhit + chr2R 17800672 3` UTR Dhit + chr2R 17800745 3` UTR CR45270 - chr2R_5_17800001 chr2R_17800001 RAL-913 1455 chr2R 17828526 17828579 chr2R 17828659 17828712 16 133 16.0 16.5 16.2 0.9 186 chr2R 17828526 exon grh + chr2R 17828619 intron grh + chr2R 17828712 intron grh + chr2R_16_17825001 chr2R_17825001 RAL-913 1456 chr2R 17852882 17852952 chr2R 17853023 17853093 35 141 8.5 10.5 9.5 3.3 211 chr2R 17852882 intron olf186-F + chr2R 17852988 intron olf186-F + chr2R 17853093 intron olf186-F + chr2R_35_17850001 chr2R_17850001 RAL-913 1457 chr2R 17911582 17911624 chr2R 17911708 17911750 5 126 0.5 11.0 5.8 0.7 168 chr2R 17911582 intron Elk + chr2R 17911666 intron Elk + chr2R 17911750 intron Elk + chr2R_5_17910001 chr2R_17910001 RAL-913 1458 chr2R 17918131 17918181 chr2R 17918258 17918269 15 123 16.0 0.0 8.0 1.7 138 chr2R 17918131 intron Elk + chr2R 17918200 intron Elk + chr2R 17918269 intron Elk + chr2R_15_17915001 chr2R_17915001 RAL-913 1459 chr2R 17921405 17921470 chr2R 17921537 17921602 10 132 0.0 13.0 6.5 1.3 197 chr2R 17921405 intron Elk + chr2R 17921504 intron Elk + chr2R 17921602 intron Elk + chr2R_10_17920001 chr2R_17920001 RAL-913 1460 chr2R 17961441 17961458 chr2R 17961576 17961593 8 135 8.0 0.0 4.0 1.6 152 chr2R 17961441 intergenic not near genes chr2R 17961517 intergenic not near genes chr2R 17961593 intergenic not near genes chr2R_8_17960001 chr2R_17960001 RAL-913 1461 chr2R 17963277 17963289 chr2R 17963460 17963471 5 183 4.5 12.0 8.2 0.5 194 chr2R 17963277 intergenic not near genes chr2R 17963374 intergenic not near genes chr2R 17963471 intergenic not near genes chr2R_5_17960001 chr2R_17960001 RAL-913 1462 chr2R 17982878 17982945 chr2R 17983013 17983080 35 134 9.5 9.5 9.5 3.3 202 chr2R 17982878 intron dpr13 - chr2R 17982979 intron dpr13 - chr2R 17983080 intron dpr13 - chr2R_35_17980001 chr2R_17980001 RAL-913 1463 chr2R 18021547 18021567 chr2R 18021969 18021974 5 412 3.5 3.0 3.2 1.2 427 chr2R 18021547 exon CG10910 + chr2R 18021760 exon CG10910 + chr2R 18021974 exon CG10910 + chr2R_5_18020001 chr2R_18020001 RAL-913 1464 chr2R 18021545 18021569 chr2R 18021977 18022036 11 455 3.5 4.5 4.0 2.2 491 chr2R 18021545 exon CG10910 + chr2R 18021790 exon CG10910 + chr2R 18022036 exon CG10910 + chr2R_11_18020001 chr2R_18020001 RAL-913 1465 chr2R 18042771 18042995 chr2R 18042938 18043138 6 159 4.5 6.5 5.5 0.9 367 chr2R 18042771 3` UTR CG5773 - chr2R 18042954 3` UTR CG5773 - chr2R 18043138 exon CG5773 - chr2R_6_18040001 chr2R_18040001 RAL-913 1466 chr2R 18045626 18045689 chr2R 18046028 18046091 jockey 35 402 14.0 12.0 13.0 2.5 465 chr2R 18045626 intergenic not near genes chr2R 18045858 intergenic not near genes chr2R 18046091 intergenic CG5767 - chr2R_35_18045001 chr2R_18045001 RAL-913 1467 chr2R 18074553 18074622 chr2R 18074679 18074748 27 126 7.5 9.0 8.2 2.9 195 chr2R 18074553 intron CG34386 + chr2R 18074650 intron CG34386 + chr2R 18074748 intron CG34386 + chr2R_27_18070001 chr2R_18070001 RAL-913 1468 chr2R 18089149 18089222 chr2R 18089311 18089351 11 158 5.0 9.0 7.0 1.4 202 chr2R 18089149 intron CG34386 + chr2R 18089250 intron CG34386 + chr2R 18089351 intron CG34386 + chr2R_11_18085001 chr2R_18085001 RAL-913 1469 chr2R 18111633 18111699 chr2R 18115551 18115617 F-element 17 3918 9.0 10.0 9.5 1.6 3984 chr2R 18111633 intergenic not near genes chr2R 18113625 intergenic not near genes chr2R 18115617 intergenic not near genes chr2R_17_18110001 chr2R_18110001 RAL-913 1470 chr2R 18127369 18127379 chr2R 18127534 18127544 4 165 0.0 18.0 9.0 0.4 175 chr2R 18127369 intron Spn55B + chr2R 18127456 intron Spn55B + chr2R 18127544 intron Spn55B + chr2R_4_18125001 chr2R_18125001 RAL-913 1471 chr2R 18190825 18190847 chr2R 18190951 18190973 13 126 11.0 10.0 10.5 1.1 148 chr2R 18190825 intron CG33958 - chr2R 18190899 intron CG33958 - chr2R 18190973 intron CG33958 - chr2R_13_18190001 chr2R_18190001 RAL-913 1472 chr2R 18195154 18195179 chr2R 18195292 18195317 9 137 13.5 7.5 10.5 0.8 163 chr2R 18195154 intergenic not near genes chr2R 18195236 intergenic not near genes chr2R 18195317 intergenic not near genes chr2R_9_18195001 chr2R_18195001 RAL-913 1473 chr2R 18245616 18245630 chr2R 18245743 18245757 5 127 4.5 16.0 10.2 0.4 141 chr2R 18245616 intergenic not near genes chr2R 18245686 intergenic CR44420 - chr2R 18245757 intergenic CR44420 - chr2R_5_18245001 chr2R_18245001 RAL-913 1474 chr2R 18260865 18260876 chr2R 18261060 18261071 4 195 6.0 0.0 3.0 1.0 206 chr2R 18260865 intergenic not near genes chr2R 18260968 intergenic not near genes chr2R 18261071 intergenic not near genes chr2R_4_18260001 chr2R_18260001 RAL-913 1475 chr2R 18289379 18289455 chr2R 18289531 18289597 20 151 8.0 8.5 8.2 2.2 218 chr2R 18289379 intron,intron sbb -,CG14502 + chr2R 18289488 intron,intron sbb -,CG14502 + chr2R 18289597 5` UTR,intron sbb -,CG14502 + chr2R_20_18285001 chr2R_18285001 RAL-913 1476 chr2R 18308243 18308317 chr2R 18308395 18308473 37 154 6.0 9.5 7.8 4.2 230 chr2R 18308243 intron sbb - chr2R 18308358 intron sbb - chr2R 18308473 intron sbb - chr2R_37_18305001 chr2R_18305001 RAL-913 1477 chr2R 18318332 18318342 chr2R 18318463 18318473 6 131 6.5 0.0 3.2 1.4 141 chr2R 18318332 intron sbb - chr2R 18318402 intron sbb - chr2R 18318473 intron sbb - chr2R_6_18315001 chr2R_18315001 RAL-913 1478 chr2R 18358348 18358409 chr2R 18372610 18372671 roo 27 14260 11.0 7.5 9.2 2.6 14323 chr2R 18358348 intergenic not near genes chr2R 18365510 intergenic not near genes chr2R 18372671 intergenic not near genes chr2R_27_18365001 chr2R_18365001 RAL-913 1479 chr2R 18390823 18390895 chr2R 18390960 18391032 17 137 7.0 11.0 9.0 1.7 209 chr2R 18390823 intergenic CG15068 - chr2R 18390928 intergenic CG15068 - chr2R 18391032 intergenic CG15068 - chr2R_17_18390001 chr2R_18390001 RAL-913 1480 chr2R 18405709 18405788 chr2R 18405839 18405918 16 130 4.5 0.0 2.2 5.0 209 chr2R 18405709 intergenic GstE6 +,GstE5 + chr2R 18405814 intergenic GstE6 +,GstE5 + chr2R 18405918 intergenic GstE6 + chr2R_16_18405001 chr2R_18405001 RAL-913 1481 chr2R 18408241 18408313 chr2R 18408412 18408469 38 168 8.0 9.0 8.5 4.0 228 chr2R 18408241 exon GstE8 + chr2R 18408355 exon GstE8 + chr2R 18408469 exon GstE8 + chr2R_38_18405001 chr2R_18405001 RAL-913 1482 chr2R 18487797 18487829 chr2R 18495293 18495330 blood 23 7501 9.0 6.5 7.8 2.6 7533 chr2R 18487797 intron CG30116 - chr2R 18491564 intron CG30116 - chr2R 18495330 intron CG30116 - chr2R_23_18490001 chr2R_18490001 RAL-913 1483 chr2R 18528144 18528222 chr2R 18528279 18528287 35 129 8.5 9.5 9.0 3.5 143 chr2R 18528144 intron CG10924 + chr2R 18528216 intron CG10924 + chr2R 18528287 intron CG10924 + chr2R_35_18525001 chr2R_18525001 RAL-913 1484 chr2R 18575125 18575143 chr2R 18575392 18575410 5 267 5.0 10.5 7.8 0.6 285 chr2R 18575125 intron GEFmeso - chr2R 18575268 intron GEFmeso - chr2R 18575410 intron GEFmeso - chr2R_5_18575001 chr2R_18575001 RAL-913 1485 chr2R 18575147 18575164 chr2R 18575388 18575431 7 260 2.5 9.5 6.0 1.0 284 chr2R 18575147 intron GEFmeso - chr2R 18575289 intron GEFmeso - chr2R 18575431 intron GEFmeso - chr2R_7_18575001 chr2R_18575001 RAL-913 1486 chr2R 18575753 18575766 chr2R 18581990 18581997 3S18 5 6236 18.0 8.5 13.2 0.4 6244 chr2R 18575753 intron GEFmeso - chr2R 18578875 intron GEFmeso - chr2R 18581997 intron GEFmeso - chr2R_5_18575001 chr2R_18575001 RAL-913 1487 chr2R 18575811 18575825 chr2R 18581986 18582063 3S18 14 6212 7.5 7.5 7.5 1.6 6252 chr2R 18575811 intron GEFmeso - chr2R 18578937 intron GEFmeso - chr2R 18582063 intron GEFmeso - chr2R_14_18575001 chr2R_18575001 RAL-913 1488 chr2R 18590825 18590896 chr2R 18600027 18600068 roo 27 9195 5.5 8.0 6.8 3.5 9243 chr2R 18590825 intron GEFmeso - chr2R 18595446 intron GEFmeso - chr2R 18600068 intron GEFmeso - chr2R_27_18595001 chr2R_18595001 RAL-913 1489 chr2R 18732303 18732376 chr2R 18732487 18732529 34 182 9.0 11.0 10.0 3.1 226 chr2R 18732303 intron Hs3st-A + chr2R 18732416 intron Hs3st-A + chr2R 18732529 intron Hs3st-A + chr2R_34_18730001 chr2R_18730001 RAL-913 1490 chr2R 18738170 18738233 chr2R 18738296 18738359 31 126 0.5 7.5 4.0 6.2 189 chr2R 18738170 intron Hs3st-A + chr2R 18738264 intron Hs3st-A + chr2R 18738359 intron Hs3st-A + chr2R_31_18735001 chr2R_18735001 RAL-913 1491 chr2R 18769596 18769601 chr2R 18769753 18769758 4 157 17.5 25.0 21.2 0.2 162 chr2R 18769596 intron Mctp + chr2R 18769677 intron Mctp + chr2R 18769758 intron Mctp + chr2R_4_18765001 chr2R_18765001 RAL-913 1492 chr2R 18769602 18769608 chr2R 18769751 18769765 6 156 15.0 25.0 20.0 0.3 163 chr2R 18769602 intron Mctp + chr2R 18769684 intron Mctp + chr2R 18769765 intron Mctp + chr2R_6_18765001 chr2R_18765001 RAL-913 1493 chr2R 18862400 18862445 chr2R 18862527 18862565 17 125 13.5 11.5 12.5 1.3 165 chr2R 18862400 intergenic Jheh3 -,CG43069 + chr2R 18862482 intergenic CG43069 +,Jheh3 - chr2R 18862565 intergenic CG43069 +,Jheh3 - chr2R_17_18860001 chr2R_18860001 RAL-913 1494 chr2R 18862447 18862475 chr2R 18862522 18862602 14 117 11.0 12.5 11.8 1.1 155 chr2R 18862447 intergenic Jheh3 -,CG43069 + chr2R 18862524 intergenic CG43069 +,Jheh3 - chr2R 18862602 intergenic CG43069 + chr2R_14_18860001 chr2R_18860001 RAL-913 1495 chr2R 18991977 18992050 chr2R 18992162 18992241 41 188 3.5 8.0 5.8 6.0 264 chr2R 18991977 intron tn + chr2R 18992109 intron tn + chr2R 18992241 intron tn + chr2R_41_18990001 chr2R_18990001 RAL-913 1496 chr2R 19026000 19026053 chr2R 19026190 19026243 14 190 9.5 8.0 8.8 1.4 243 chr2R 19026000 exon 5-HT1B - chr2R 19026122 intron 5-HT1B - chr2R 19026243 intron 5-HT1B - chr2R_14_19025001 chr2R_19025001 RAL-913 1497 chr2R 19026936 19026941 chr2R 19027064 19027070 4 129 18.0 0.0 9.0 0.4 134 chr2R 19026936 intron 5-HT1B - chr2R 19027003 intron 5-HT1B - chr2R 19027070 intron 5-HT1B - chr2R_4_19025001 chr2R_19025001 RAL-913 1498 chr2R 19067713 19067753 chr2R 19067839 19067879 11 126 4.5 0.0 2.2 3.4 166 chr2R 19067713 intron 5-HT1A + chr2R 19067796 intron 5-HT1A + chr2R 19067879 intron 5-HT1A + chr2R_11_19065001 chr2R_19065001 RAL-913 1499 chr2R 19103388 19103430 chr2R 19103520 19103562 18 132 10.5 7.0 8.8 1.8 174 chr2R 19103388 intron 5-HT1A + chr2R 19103475 intron 5-HT1A + chr2R 19103562 intron 5-HT1A + chr2R_18_19100001 chr2R_19100001 RAL-913 1500 chr2R 19209149 19209210 chr2R 19209280 19209351 19 137 9.5 10.0 9.8 1.8 202 chr2R 19209149 intron hppy + chr2R 19209250 intron hppy + chr2R 19209351 intron hppy + chr2R_19_19205001 chr2R_19205001 RAL-913 1501 chr2R 19253049 19253108 chr2R 19253189 19253248 23 139 17.0 7.0 12.0 1.8 199 chr2R 19253049 exon CG33453 - chr2R 19253148 exon CG33453 - chr2R 19253248 intergenic CG33453 - chr2R_23_19250001 chr2R_19250001 RAL-913 1502 chr2R 19280157 19280231 chr2R 19286112 19286186 39 5960 65.0 42.5 53.8 0.7 6029 chr2R 19280157 3` UTR rib + chr2R 19283172 exon CG11906 - chr2R 19286186 exon CG10474 - chr2R_39_19280001 chr2R_19280001 RAL-913 1503 chr2R 19363144 19363219 chr2R 19363270 19363345 16 126 10.0 4.5 7.2 2.0 201 chr2R 19363144 intergenic CG10051 + chr2R 19363244 intergenic CG10051 + chr2R 19363345 intergenic CG10051 + chr2R_16_19360001 chr2R_19360001 RAL-913 1504 chr2R 19384907 19385088 chr2R 19385045 19385217 5 133 1.5 0.0 0.8 2.8 310 chr2R 19384907 3` UTR CG10073 + chr2R 19385062 intergenic CG10073 + chr2R 19385217 intergenic CG10073 + chr2R_5_19385001 chr2R_19385001 RAL-913 1505 chr2R 19474992 19475007 chr2R 19475140 19475155 4 148 38.0 34.0 36.0 0.1 163 chr2R 19474992 intron par-1 + chr2R 19475074 intron par-1 + chr2R 19475155 intron par-1 + chr2R_4_19475001 chr2R_19475001 RAL-913 1506 chr2R 19534952 19534994 chr2R 19535751 19535793 4 799 15.0 43.0 29.0 0.1 841 chr2R 19534952 intron sm - chr2R 19535372 intron sm - chr2R 19535793 intron sm - chr2R_4_19535001 chr2R_19535001 RAL-913 1507 chr2R 19536428 19536487 chr2R 19536560 19536619 4 132 27.0 12.5 19.8 0.2 191 chr2R 19536428 intron sm - chr2R 19536524 intron sm - chr2R 19536619 intron sm - chr2R_4_19535001 chr2R_19535001 RAL-913 1508 chr2R 19575522 19575578 chr2R 19575650 19575706 30 128 10.5 9.0 9.8 2.8 184 chr2R 19575522 intron sm - chr2R 19575614 intron sm - chr2R 19575706 intron sm - chr2R_30_19575001 chr2R_19575001 RAL-913 1509 chr2R 19583036 19583042 chr2R 19583178 19583184 7 142 3.5 10.0 6.8 0.9 148 chr2R 19583036 intron sm - chr2R 19583110 intron sm - chr2R 19583184 intron sm - chr2R_7_19580001 chr2R_19580001 RAL-913 1510 chr2R 19601225 19601243 chr2R 19601365 19601383 10 140 17.5 12.5 15.0 0.6 158 chr2R 19601225 intron sm - chr2R 19601304 intron sm - chr2R 19601383 intron sm - chr2R_10_19600001 chr2R_19600001 RAL-913 1511 chr2R 19601244 19601292 chr2R 19601364 19601432 16 139 8.0 12.0 10.0 1.5 188 chr2R 19601244 intron sm - chr2R 19601338 intron sm - chr2R 19601432 intron sm - chr2R_16_19600001 chr2R_19600001 RAL-913 1512 chr2R 19658070 19658136 chr2R 19658224 19658300 31 163 10.0 5.5 7.8 3.5 230 chr2R 19658070 intron CG15125 + chr2R 19658185 intron CG15125 + chr2R 19658300 intron CG15125 + chr2R_31_19655001 chr2R_19655001 RAL-913 1513 chr2R 19674445 19674493 chr2R 19677139 19677202 21 2697 60.5 63.5 62.0 0.3 2757 chr2R 19674445 intergenic not near genes chr2R 19675824 intergenic not near genes chr2R 19677202 intergenic not near genes chr2R_21_19675001 chr2R_19675001 RAL-913 1514 chr2R 19715818 19715857 chr2R 19723337 19723376 blood 15 7517 9.5 9.5 9.5 1.4 7558 chr2R 19715818 intergenic not near genes chr2R 19719597 intergenic not near genes chr2R 19723376 intergenic not near genes chr2R_15_19715001 chr2R_19715001 RAL-913 1515 chr2R 19776564 19776576 chr2R 19779936 19779949 jockey 6 3373 22.0 17.0 19.5 0.3 3385 chr2R 19776564 intergenic not near genes chr2R 19778256 intergenic not near genes chr2R 19779949 intergenic not near genes chr2R_6_19775001 chr2R_19775001 RAL-913 1516 chr2R 19776577 19776612 chr2R 19779935 19779985 jockey 14 3372 15.0 17.0 16.0 0.8 3408 chr2R 19776577 intergenic not near genes chr2R 19778281 intergenic not near genes chr2R 19779985 intergenic not near genes chr2R_14_19775001 chr2R_19775001 RAL-913 1517 chr2R 19794828 19794879 chr2R 19794981 19795032 11 152 11.0 6.0 8.5 1.2 204 chr2R 19794828 intergenic not near genes chr2R 19794930 intergenic not near genes chr2R 19795032 intergenic not near genes chr2R_11_19790001 chr2R_19790001 RAL-913 1518 chr2R 19810632 19810658 chr2R 19810765 19810791 8 133 6.5 10.0 8.2 0.9 159 chr2R 19810632 intergenic not near genes chr2R 19810712 intergenic not near genes chr2R 19810791 intergenic not near genes chr2R_8_19810001 chr2R_19810001 RAL-913 1519 chr2R 19914807 19914865 chr2R 19922269 19922327 mdg1 17 7462 10.0 11.5 10.8 1.4 7520 chr2R 19914807 intergenic not near genes chr2R 19918567 intergenic not near genes chr2R 19922327 intergenic not near genes chr2R_17_19915001 chr2R_19915001 RAL-913 1520 chr2R 19925973 19926037 chr2R 19926106 19926170 34 133 7.0 14.5 10.8 2.9 197 chr2R 19925973 intergenic CR44626 - chr2R 19926072 intergenic CR44626 - chr2R 19926170 intergenic CR44626 - chr2R_34_19925001 chr2R_19925001 RAL-913 1521 chr2R 19943245 19943295 chr2R 19943380 19943429 12 135 0.0 7.5 3.8 2.5 184 chr2R 19943245 intergenic not near genes chr2R 19943337 intergenic not near genes chr2R 19943429 intergenic not near genes chr2R_12_19940001 chr2R_19940001 RAL-913 1522 chr2R 19957385 19957425 chr2R 19962637 19962677 copia 14 5248 9.5 7.5 8.5 1.5 5292 chr2R 19957385 intergenic CG44623 + chr2R 19960031 intergenic not near genes chr2R 19962677 intergenic not near genes chr2R_14_19960001 chr2R_19960001 RAL-913 1523 chr2R 19957434 19957456 chr2R 19962635 19962697 copia 15 5234 6.5 7.5 7.0 1.9 5263 chr2R 19957434 intergenic CG44623 + chr2R 19960066 intergenic not near genes chr2R 19962697 intergenic not near genes chr2R_15_19960001 chr2R_19960001 RAL-913 1524 chr2R 20029393 20029448 chr2R 20029519 20029574 12 126 11.0 10.5 10.8 1.0 181 chr2R 20029393 intergenic not near genes chr2R 20029484 intergenic not near genes chr2R 20029574 intergenic not near genes chr2R_12_20025001 chr2R_20025001 RAL-913 1525 chr2R 20057947 20057970 chr2R 20058077 20058080 11 128 9.5 3.0 6.2 1.5 133 chr2R 20057947 intergenic CR44631 + chr2R 20058014 intergenic CR44631 + chr2R 20058080 intergenic CR44631 + chr2R_11_20055001 chr2R_20055001 RAL-913 1526 chr2R 20069205 20069249 chr2R 20071895 20071939 opus 22 2690 0.0 9.0 4.5 4.0 2734 chr2R 20069205 intergenic not near genes chr2R 20070572 intergenic not near genes chr2R 20071939 intergenic not near genes chr2R_22_20070001 chr2R_20070001 RAL-913 1527 chr2R 20079392 20079447 chr2R 20079847 20079903 4 456 29.0 38.5 33.8 0.1 511 chr2R 20079392 intergenic not near genes chr2R 20079648 intergenic not near genes chr2R 20079903 intergenic not near genes chr2R_4_20075001 chr2R_20075001 RAL-913 1528 chr2R 20080602 20080624 chr2R 20080729 20080751 10 127 5.0 24.5 14.8 0.6 149 chr2R 20080602 intergenic not near genes chr2R 20080676 intergenic not near genes chr2R 20080751 intergenic not near genes chr2R_10_20080001 chr2R_20080001 RAL-913 1529 chr2R 20368470 20368495 chr2R 20377701 20377726 roo 7 9231 16.0 7.5 11.8 0.5 9256 chr2R 20368470 intergenic not near genes chr2R 20373098 intergenic not near genes chr2R 20377726 intergenic not near genes chr2R_7_20370001 chr2R_20370001 RAL-913 1530 chr2R 20432441 20432480 chr2R 20432587 20432626 7 133 18.5 11.0 14.8 0.4 185 chr2R 20432441 intron CG12484 + chr2R 20432534 intron CG12484 + chr2R 20432626 intron CG12484 + chr2R_7_20430001 chr2R_20430001 RAL-913 1531 chr2R 20432482 20432495 chr2R 20432578 20432630 7 132 16.5 9.5 13.0 0.5 148 chr2R 20432482 intron CG12484 + chr2R 20432556 intron CG12484 + chr2R 20432630 intron CG12484 + chr2R_7_20430001 chr2R_20430001 RAL-913 1532 chr2R 20473155 20473222 chr2R 20473312 20473378 28 152 11.0 8.0 9.5 2.7 223 chr2R 20473155 intron CG12484 + chr2R 20473266 intron CG12484 + chr2R 20473378 intron CG12484 + chr2R_28_20470001 chr2R_20470001 RAL-913 1533 chr2R 20502248 20502297 chr2R 20502412 20502461 24 163 7.5 9.0 8.2 2.6 213 chr2R 20502248 intergenic not near genes chr2R 20502354 intergenic not near genes chr2R 20502461 intergenic not near genes chr2R_24_20500001 chr2R_20500001 RAL-913 1534 chr2R 20502300 20502315 chr2R 20502410 20502479 9 153 3.0 8.0 5.5 1.4 179 chr2R 20502300 intergenic not near genes chr2R 20502390 intergenic not near genes chr2R 20502479 intergenic not near genes chr2R_9_20500001 chr2R_20500001 RAL-913 1535 chr2R 20523003 20523063 chr2R 20523164 20523224 15 152 6.0 12.5 9.2 1.5 221 chr2R 20523003 intergenic not near genes chr2R 20523114 intergenic not near genes chr2R 20523224 intergenic not near genes chr2R_15_20520001 chr2R_20520001 RAL-913 1536 chr2R 20541943 20542004 chr2R 20542071 20542132 31 126 13.5 11.0 12.2 2.3 189 chr2R 20541943 intergenic not near genes chr2R 20542038 intergenic not near genes chr2R 20542132 intergenic not near genes chr2R_31_20540001 chr2R_20540001 RAL-913 1537 chr2R 20555290 20555348 chr2R 20555424 20555488 5 139 0.0 7.5 3.8 1.0 198 chr2R 20555290 intergenic not near genes chr2R 20555389 intergenic not near genes chr2R 20555488 intergenic not near genes chr2R_5_20555001 chr2R_20555001 RAL-913 1538 chr2R 20667322 20667331 chr2R 20667484 20667493 8 161 17.5 18.5 18.0 0.4 171 chr2R 20667322 intergenic Fem-1 -,exu - chr2R 20667408 intergenic exu -,Fem-1 - chr2R 20667493 3` UTR exu - chr2R_8_20665001 chr2R_20665001 RAL-913 1539 chr2R 20739395 20739426 chr2R 20744213 20744243 F-element 11 4815 15.0 9.0 12.0 0.8 4848 chr2R 20739395 intron dpr + chr2R 20741819 intron dpr + chr2R 20744243 intron dpr + chr2R_11_20740001 chr2R_20740001 RAL-913 1540 chr2R 20739427 20739473 chr2R 20744209 20744285 F-element 11 4812 6.5 8.5 7.5 1.3 4858 chr2R 20739427 intron dpr + chr2R 20741856 intron dpr + chr2R 20744285 intron dpr + chr2R_11_20740001 chr2R_20740001 RAL-913 1541 chr2R 20757419 20757457 chr2R 20757546 20757584 25 126 6.5 13.5 10.0 2.3 165 chr2R 20757419 intergenic not near genes chr2R 20757502 intergenic not near genes chr2R 20757584 intergenic not near genes chr2R_25_20755001 chr2R_20755001 RAL-913 1542 chr2R 20759761 20759816 chr2R 20759887 20759917 8 114 3.0 10.5 6.8 1.0 156 chr2R 20759761 intergenic not near genes chr2R 20759839 intergenic not near genes chr2R 20759917 intergenic not near genes chr2R_8_20755001 chr2R_20755001 RAL-913 1543 chr2R 20783264 20783321 chr2R 20788086 20788143 F-element 23 4821 12.5 9.0 10.8 1.9 4879 chr2R 20783264 intergenic not near genes chr2R 20785704 intergenic not near genes chr2R 20788143 intergenic CG43666 - chr2R_23_20785001 chr2R_20785001 RAL-913 1544 chr2R 20817477 20817516 chr2R 20818032 20818071 13 552 13.0 8.5 10.8 1.1 594 chr2R 20817477 intergenic not near genes chr2R 20817774 intergenic not near genes chr2R 20818071 intergenic not near genes chr2R_13_20815001 chr2R_20815001 RAL-913 1545 chr2R 20830489 20830564 chr2R 20830619 20830694 35 128 12.5 12.5 12.5 2.6 205 chr2R 20830489 intron,intron insc -,sktl - chr2R 20830592 intron,intron insc -,sktl - chr2R 20830694 intron,intron insc -,sktl - chr2R_35_20830001 chr2R_20830001 RAL-913 1546 chr2R 20834100 20834172 chr2R 20836801 20836873 36 2703 63.0 62.5 62.8 0.6 2773 chr2R 20834100 intron,intron insc -,sktl - chr2R 20835486 intron,intron insc -,sktl - chr2R 20836873 intergenic not near genes chr2R_36_20835001 chr2R_20835001 RAL-913 1547 chr2R 20916400 20916467 chr2R 20916580 20916646 19 181 9.0 12.5 10.8 1.6 246 chr2R 20916400 intergenic Rx + chr2R 20916523 intergenic Rx + chr2R 20916646 intergenic Rx + chr2R_19_20915001 chr2R_20915001 RAL-913 1548 chr2R 20942362 20942370 chr2R 20942495 20942499 5 132 0.0 17.0 8.5 0.5 137 chr2R 20942362 intergenic not near genes chr2R 20942430 intergenic not near genes chr2R 20942499 intergenic not near genes chr2R_5_20940001 chr2R_20940001 RAL-913 1549 chr2R 20962861 20962935 chr2R 20963009 20963083 25 148 7.0 7.0 7.0 3.1 222 chr2R 20962861 intergenic not near genes chr2R 20962972 intergenic not near genes chr2R 20963083 intergenic not near genes chr2R_25_20960001 chr2R_20960001 RAL-913 1550 chr2R 21031707 21031778 chr2R 21031846 21031917 26 139 6.5 8.0 7.2 3.2 210 chr2R 21031707 intergenic not near genes chr2R 21031812 intergenic not near genes chr2R 21031917 intergenic not near genes chr2R_26_21030001 chr2R_21030001 RAL-913 1551 chr2R 21060588 21060654 chr2R 21060714 21060780 21 126 7.5 8.5 8.0 2.3 192 chr2R 21060588 intergenic CG15653 -,mRpL54 + chr2R 21060684 intergenic mRpL54 +,CG15653 - chr2R 21060780 intergenic mRpL54 +,CG15653 - chr2R_21_21060001 chr2R_21060001 RAL-913 1552 chr2R 21080259 21080284 chr2R 21080387 21080399 13 126 8.0 5.5 6.8 1.7 140 chr2R 21080259 intron Treh + chr2R 21080329 intron Treh + chr2R 21080399 intron Treh + chr2R_13_21080001 chr2R_21080001 RAL-913 1553 chr2R 21113436 21113485 chr2R 21113575 21113624 32 138 13.0 8.0 10.5 2.8 188 chr2R 21113436 intron ktub + chr2R 21113530 intron ktub + chr2R 21113624 intron ktub + chr2R_32_21110001 chr2R_21110001 RAL-913 1554 chr2R 21141067 21141145 chr2R 21141213 21141291 32 146 6.5 8.0 7.2 3.9 224 chr2R 21141067 intron Magi - chr2R 21141179 intron Magi - chr2R 21141291 intron Magi - chr2R_32_21140001 chr2R_21140001 RAL-913 1555 chr2R 21151096 21151146 chr2R 21153758 21153829 opus 21 2677 0.5 4.0 2.2 6.6 2733 chr2R 21151096 intron CG30389 - chr2R 21152462 intron CG30389 - chr2R 21153829 intron CG30389 - chr2R_21_21150001 chr2R_21150001 RAL-913 1556 chr2R 21217273 21217284 chr2R 21217410 21217421 4 136 16.5 0.0 8.2 0.4 148 chr2R 21217273 exon CG15661 - chr2R 21217347 5` UTR CG15661 - chr2R 21217421 5` UTR CG15661 - chr2R_4_21215001 chr2R_21215001 RAL-913 1557 chr2R 21352513 21352532 chr2R 21352674 21352693 10 161 19.5 4.0 11.8 0.8 180 chr2R 21352513 intergenic not near genes chr2R 21352603 intergenic not near genes chr2R 21352693 intergenic not near genes chr2R_10_21350001 chr2R_21350001 RAL-913 1558 chr2R 21363137 21363172 chr2R 21363285 21363311 5 146 0.0 13.5 6.8 0.6 174 chr2R 21363137 intron cv-2 - chr2R 21363224 intron cv-2 - chr2R 21363311 intron cv-2 - chr2R_5_21360001 chr2R_21360001 RAL-913 1559 chr2R 21388013 21388075 chr2R 21393835 21393902 29 5826 50.5 53.0 51.8 0.5 5889 chr2R 21388013 exon Acox57D-p + chr2R 21390958 exon Acox57D-d + chr2R 21393902 3` UTR Sdc - chr2R_29_21390001 chr2R_21390001 RAL-913 1560 chr2R 21414193 21414205 chr2R 21414401 21414413 7 208 0.0 22.5 11.2 0.6 220 chr2R 21414193 intron Sdc - chr2R 21414303 intron Sdc - chr2R 21414413 intron Sdc - chr2R_7_21410001 chr2R_21410001 RAL-913 1561 chr2R 21421297 21421352 chr2R 21421426 21421481 33 128 7.5 13.0 10.2 2.9 184 chr2R 21421297 intron Sdc - chr2R 21421389 intron Sdc - chr2R 21421481 intron Sdc - chr2R_33_21420001 chr2R_21420001 RAL-913 1562 chr2R 21458589 21458654 chr2R 21458893 21458908 8 298 13.5 4.5 9.0 0.8 319 chr2R 21458589 intron Sdc - chr2R 21458748 intron Sdc - chr2R 21458908 intron Sdc - chr2R_8_21455001 chr2R_21455001 RAL-913 1563 chr2R 21505722 21505792 chr2R 21505853 21505923 25 128 9.5 9.5 9.5 2.4 201 chr2R 21505722 intron MESK2 + chr2R 21505822 intron MESK2 + chr2R 21505923 intron MESK2 + chr2R_25_21505001 chr2R_21505001 RAL-913 1564 chr2R 21571088 21571116 chr2R 21571215 21571243 10 127 17.0 7.0 12.0 0.8 155 chr2R 21571088 intron CG10440 - chr2R 21571166 intron CG10440 - chr2R 21571243 intron CG10440 - chr2R_10_21570001 chr2R_21570001 RAL-913 1565 chr2R 21571118 21571153 chr2R 21571210 21571280 20 121 12.5 6.0 9.2 2.0 162 chr2R 21571118 intron CG10440 - chr2R 21571199 intron CG10440 - chr2R 21571280 intron CG10440 - chr2R_20_21570001 chr2R_21570001 RAL-913 1566 chr2R 21592821 21592839 chr2R 21592932 21592936 6 118 11.0 15.5 13.2 0.4 115 chr2R 21592821 intergenic not near genes chr2R 21592878 intergenic not near genes chr2R 21592936 intergenic not near genes chr2R_6_21590001 chr2R_21590001 RAL-913 1567 chr2R 21701179 21701246 chr2R 21701311 21701353 32 129 10.5 8.0 9.2 3.1 174 chr2R 21701179 intron HmgZ - chr2R 21701266 intron HmgZ - chr2R 21701353 intron HmgZ - chr2R_32_21700001 chr2R_21700001 RAL-913 1568 chr2R 21721550 21721608 chr2R 21721671 21721745 13 135 11.0 1.5 6.2 1.8 195 chr2R 21721550 intron LBR + chr2R 21721648 intron LBR + chr2R 21721745 intron LBR + chr2R_13_21720001 chr2R_21720001 RAL-913 1569 chr2R 21725186 21725222 chr2R 21725313 21725349 8 127 0.0 8.0 4.0 1.6 163 chr2R 21725186 intergenic not near genes chr2R 21725268 intergenic not near genes chr2R 21725349 intergenic not near genes chr2R_8_21725001 chr2R_21725001 RAL-913 1570 chr2R 21738250 21738309 chr2R 21747450 21747478 roo 14 9191 5.5 9.0 7.2 1.7 9228 chr2R 21738250 intergenic not near genes chr2R 21742864 intergenic not near genes chr2R 21747478 intergenic not near genes chr2R_14_21740001 chr2R_21740001 RAL-913 1571 chr2R 21753043 21753110 chr2R 21753578 21753645 roo 33 534 12.5 11.0 11.8 2.6 602 chr2R 21753043 intergenic not near genes chr2R 21753344 intergenic not near genes chr2R 21753645 intergenic not near genes chr2R_33_21750001 chr2R_21750001 RAL-913 1572 chr2R 21759511 21759592 chr2R 21759648 21759721 39 135 7.5 3.0 5.2 6.3 210 chr2R 21759511 intergenic not near genes chr2R 21759616 intergenic not near genes chr2R 21759721 intergenic not near genes chr2R_39_21755001 chr2R_21755001 RAL-913 1573 chr2R 21777378 21777445 chr2R 21777511 21777578 26 133 8.0 7.0 7.5 3.1 200 chr2R 21777378 intergenic not near genes chr2R 21777478 intergenic not near genes chr2R 21777578 intergenic not near genes chr2R_26_21775001 chr2R_21775001 RAL-913 1574 chr2R 21809472 21809513 chr2R 21817762 21817803 roo 21 8290 11.0 5.5 8.2 2.3 8331 chr2R 21809472 intergenic not near genes chr2R 21813638 intergenic not near genes chr2R 21817803 intergenic not near genes chr2R_21_21810001 chr2R_21810001 RAL-913 1575 chr2R 21842949 21842966 chr2R 21843078 21843088 11 128 11.5 8.5 10.0 1.0 139 chr2R 21842949 intergenic not near genes chr2R 21843018 intergenic not near genes chr2R 21843088 intergenic not near genes chr2R_11_21840001 chr2R_21840001 RAL-913 1576 chr2R 21857296 21857546 chr2R 21857437 21857670 64 136 8.5 8.5 8.5 6.7 374 chr2R 21857296 intergenic not near genes chr2R 21857483 intergenic not near genes chr2R 21857670 intergenic not near genes chr2R_64_21855001 chr2R_21855001 RAL-913 1577 chr2R 21888296 21888323 chr2R 21888442 21888470 11 147 5.0 16.5 10.8 0.9 174 chr2R 21888296 intron Fili + chr2R 21888383 intron Fili + chr2R 21888470 intron Fili + chr2R_11_21885001 chr2R_21885001 RAL-913 1578 chr2R 21889527 21889591 chr2R 21889677 21889734 15 142 3.5 1.0 2.2 4.7 207 chr2R 21889527 intron Fili + chr2R 21889630 intron Fili + chr2R 21889734 intron Fili + chr2R_15_21885001 chr2R_21885001 RAL-913 1579 chr2R 21901505 21901515 chr2R 21901680 21901690 6 174 10.5 0.0 5.2 1.0 185 chr2R 21901505 intron Fili + chr2R 21901598 intron Fili + chr2R 21901690 intron Fili + chr2R_6_21900001 chr2R_21900001 RAL-913 1580 chr2R 21906229 21906297 chr2R 21906380 21906448 23 151 7.0 7.5 7.2 2.8 219 chr2R 21906229 intron Fili + chr2R 21906338 intron Fili + chr2R 21906448 intron Fili + chr2R_23_21905001 chr2R_21905001 RAL-913 1581 chr2R 21920888 21920916 chr2R 21921016 21921044 16 128 13.0 8.0 10.5 1.4 156 chr2R 21920888 intron Fili + chr2R 21920966 intron Fili + chr2R 21921044 intron Fili + chr2R_16_21920001 chr2R_21920001 RAL-913 1582 chr2R 22004249 22004319 chr2R 22004393 22004463 17 143 12.0 5.5 8.8 1.7 214 chr2R 22004249 intron CG34370 - chr2R 22004356 intron CG34370 - chr2R 22004463 intron CG34370 - chr2R_17_22000001 chr2R_22000001 RAL-913 1583 chr2R 22009728 22009800 chr2R 22009854 22009926 17 126 6.5 10.5 8.5 1.8 198 chr2R 22009728 intron CG34370 - chr2R 22009827 intron CG34370 - chr2R 22009926 intron CG34370 - chr2R_17_22005001 chr2R_22005001 RAL-913 1584 chr2R 22012947 22013011 chr2R 22013092 22013155 22 145 4.0 12.5 8.2 2.4 208 chr2R 22012947 intron CG34370 - chr2R 22013051 intron CG34370 - chr2R 22013155 intron CG34370 - chr2R_22_22010001 chr2R_22010001 RAL-913 1585 chr2R 22027487 22027526 chr2R 22027619 22027660 8 133 8.0 0.0 4.0 1.6 173 chr2R 22027487 intron CG34370 - chr2R 22027574 intron CG34370 - chr2R 22027660 intron CG34370 - chr2R_8_22025001 chr2R_22025001 RAL-913 1586 chr2R 22029485 22029531 chr2R 22029613 22029659 19 128 9.0 1.0 5.0 3.2 174 chr2R 22029485 intron CG34370 - chr2R 22029572 intron CG34370 - chr2R 22029659 intron CG34370 - chr2R_19_22025001 chr2R_22025001 RAL-913 1587 chr2R 22072631 22072713 chr2R 22072766 22072848 10 132 5.5 7.0 6.2 1.4 217 chr2R 22072631 exon CG11474 - chr2R 22072740 intron CG11474 - chr2R 22072848 exon CG11474 - chr2R_10_22070001 chr2R_22070001 RAL-913 1588 chr2R 22091854 22091893 chr2R 22091946 22091954 17 110 3.5 5.5 4.5 3.1 100 chr2R 22091854 exon CG11073 - chr2R 22091904 exon CG11073 - chr2R 22091954 exon CG11073 - chr2R_17_22090001 chr2R_22090001 RAL-913 1589 chr2R 22107321 22107359 chr2R 22107457 22107488 10 134 0.5 10.5 5.5 1.5 167 chr2R 22107321 intron Vrp1 - chr2R 22107404 intron Vrp1 - chr2R 22107488 intron Vrp1 - chr2R_10_22105001 chr2R_22105001 RAL-913 1590 chr2R 22113541 22113616 chr2R 22113678 22113757 34 140 10.5 11.0 10.8 2.9 216 chr2R 22113541 intron Vrp1 - chr2R 22113649 intron,exon Vrp1 -,CG30280 + chr2R 22113757 intron,exon Vrp1 -,CG30280 + chr2R_34_22110001 chr2R_22110001 RAL-913 1591 chr2R 22120502 22120536 chr2R 22120645 22120679 4 140 16.0 14.5 15.2 0.2 177 chr2R 22120502 intron Vrp1 - chr2R 22120590 intron Vrp1 - chr2R 22120679 intron Vrp1 - chr2R_4_22120001 chr2R_22120001 RAL-913 1592 chr2R 22120537 22120567 chr2R 22120640 22120710 12 132 7.5 11.5 9.5 1.1 173 chr2R 22120537 intron Vrp1 - chr2R 22120624 intron Vrp1 - chr2R 22120710 intron Vrp1 - chr2R_12_22120001 chr2R_22120001 RAL-913 1593 chr2R 22120746 22120785 chr2R 22121027 22121061 13 280 9.5 3.5 6.5 1.7 315 chr2R 22120746 intron Vrp1 - chr2R 22120904 intron Vrp1 - chr2R 22121061 intron Vrp1 - chr2R_13_22120001 chr2R_22120001 RAL-913 1594 chr2R 22178696 22178740 chr2R 22178833 22178877 25 137 9.0 5.0 7.0 3.1 181 chr2R 22178696 intron CG11170 - chr2R 22178786 intron CG11170 - chr2R 22178877 intron CG11170 - chr2R_25_22175001 chr2R_22175001 RAL-913 1595 chr2R 22185627 22185638 chr2R 22185776 22185787 5 149 18.0 0.0 9.0 0.5 160 chr2R 22185627 exon MED16 + chr2R 22185707 3` UTR MED16 + chr2R 22185787 3` UTR MED16 + chr2R_5_22185001 chr2R_22185001 RAL-913 1596 chr2R 22185643 22185701 chr2R 22185775 22185850 10 147 8.0 0.0 4.0 2.0 207 chr2R 22185643 exon MED16 + chr2R 22185746 3` UTR MED16 + chr2R 22185850 3` UTR MED16 + chr2R_10_22185001 chr2R_22185001 RAL-913 1597 chr2R 22349659 22349710 chr2R 22351488 22351544 jockey 22 1831 13.0 8.5 10.8 1.9 1885 chr2R 22349659 intron Liprin-gamma - chr2R 22350602 intron Liprin-gamma - chr2R 22351544 intron Liprin-gamma - chr2R_22_22350001 chr2R_22350001 RAL-913 1598 chr2R 22360336 22360350 chr2R 22360819 22360820 jockey 11 481 20.0 8.5 14.2 0.7 484 chr2R 22360336 intron Liprin-gamma - chr2R 22360578 intron Liprin-gamma - chr2R 22360820 intron Liprin-gamma - chr2R_11_22360001 chr2R_22360001 RAL-913 1599 chr2R 22460332 22460403 chr2R 22460461 22460532 27 129 10.0 6.5 8.2 2.9 200 chr2R 22460332 intron CG10384 + chr2R 22460432 intron CG10384 + chr2R 22460532 intron CG10384 + chr2R_27_22460001 chr2R_22460001 RAL-913 1600 chr2R 22503751 22503806 chr2R 22503898 22503952 15 146 8.0 11.5 9.8 1.4 201 chr2R 22503751 intron px - chr2R 22503852 intron px - chr2R 22503952 intron px - chr2R_15_22500001 chr2R_22500001 RAL-913 1601 chr2R 22525727 22525771 chr2R 22529313 22529376 jockey 23 3602 9.0 11.5 10.2 2.1 3649 chr2R 22525727 intron px - chr2R 22527552 intron px - chr2R 22529376 intron px - chr2R_23_22525001 chr2R_22525001 RAL-913 1602 chr2R 22545572 22545638 chr2R 22545701 22545767 25 129 6.5 9.5 8.0 2.8 195 chr2R 22545572 intron px - chr2R 22545670 intron px - chr2R 22545767 intron px - chr2R_25_22545001 chr2R_22545001 RAL-913 1603 chr2R 22580387 22580441 chr2R 22586581 22586635 diver 19 6193 9.0 8.0 8.5 2.0 6248 chr2R 22580387 intron dnr1 - chr2R 22583511 intron dnr1 - chr2R 22586635 intron dnr1 - chr2R_19_22580001 chr2R_22580001 RAL-913 1604 chr2R 22588120 22588142 chr2R 22588248 22588281 12 140 17.5 11.0 14.2 0.8 161 chr2R 22588120 intron dnr1 - chr2R 22588200 intron dnr1 - chr2R 22588281 intron dnr1 - chr2R_12_22585001 chr2R_22585001 RAL-913 1605 chr2R 22588143 22588155 chr2R 22588243 22588300 5 128 14.5 10.0 12.2 0.4 157 chr2R 22588143 intron dnr1 - chr2R 22588222 intron dnr1 - chr2R 22588300 intron dnr1 - chr2R_5_22585001 chr2R_22585001 RAL-913 1606 chr2R 22623413 22623475 chr2R 22623603 22623665 31 189 1.0 15.0 8.0 3.4 252 chr2R 22623413 intron CG33143 + chr2R 22623539 intron CG33143 + chr2R 22623665 intron CG33143 + chr2R_31_22620001 chr2R_22620001 RAL-913 1607 chr2R 22641657 22641716 chr2R 22641797 22641856 29 139 6.5 14.0 10.2 2.6 199 chr2R 22641657 intergenic Ugt58Fa -,RpS24 - chr2R 22641756 intergenic Ugt58Fa -,RpS24 - chr2R 22641856 3` UTR Ugt58Fa - chr2R_29_22640001 chr2R_22640001 RAL-913 1608 chr2R 22662217 22662274 chr2R 22662368 22662425 24 145 6.5 5.0 5.8 3.5 208 chr2R 22662217 intron CG42566 + chr2R 22662321 intron CG42566 + chr2R 22662425 intron CG42566 + chr2R_24_22660001 chr2R_22660001 RAL-913 1609 chr2R 22666731 22666778 chr2R 22666857 22666883 27 124 4.0 4.5 4.2 5.2 152 chr2R 22666731 5` UTR CR42868 + chr2R 22666807 intergenic CR42868 +,CR45269 -,CG30273 + chr2R 22666883 intergenic CR42868 +,CG30273 +,CR45269 - chr2R_27_22665001 chr2R_22665001 RAL-913 1610 chr2R 22774920 22774990 chr2R 22775389 22775459 jockey 25 469 12.5 9.5 11.0 2.1 539 chr2R 22774920 intron CG42260 - chr2R 22775190 intron CG42260 - chr2R 22775459 intron CG42260 - chr2R_25_22775001 chr2R_22775001 RAL-913 1611 chr2R 22781944 22781974 chr2R 22782161 22782211 11 230 5.0 6.0 5.5 1.7 267 chr2R 22781944 intron CG42260 - chr2R 22782078 intron CG42260 - chr2R 22782211 intron CG42260 - chr2R_11_22780001 chr2R_22780001 RAL-913 1612 chr2R 22787549 22787592 chr2R 22787732 22787775 25 183 8.0 6.0 7.0 3.1 226 chr2R 22787549 intron CG42260 - chr2R 22787662 intron CG42260 - chr2R 22787775 intron CG42260 - chr2R_25_22785001 chr2R_22785001 RAL-913 1613 chr2R 22835321 22835339 chr2R 22835447 22835454 6 122 11.5 4.0 7.8 0.7 133 chr2R 22835321 exon CG12490 + chr2R 22835388 exon CG12490 + chr2R 22835454 exon CG12490 + chr2R_6_22835001 chr2R_22835001 RAL-913 1614 chr2R 22835342 22835396 chr2R 22835443 22835497 16 115 5.0 3.5 4.2 3.1 155 chr2R 22835342 exon CG12490 + chr2R 22835420 exon CG12490 + chr2R 22835497 exon CG12490 + chr2R_16_22835001 chr2R_22835001 RAL-913 1615 chr2R 22842987 22843045 chr2R 22844999 22845057 flea 16 2012 12.5 16.0 14.2 1.1 2070 chr2R 22842987 intergenic CG9826 + chr2R 22844022 intergenic not near genes chr2R 22845057 intergenic not near genes chr2R_16_22840001 chr2R_22840001 RAL-913 1616 chr2R 22864942 22864953 chr2R 22865077 22865088 4 135 7.5 0.5 4.0 0.8 146 chr2R 22864942 intergenic not near genes chr2R 22865015 intergenic not near genes chr2R 22865088 intergenic not near genes chr2R_4_22865001 chr2R_22865001 RAL-913 1617 chr2R 22953342 22953383 chr2R 22953486 22953527 11 142 8.5 3.0 5.8 1.6 185 chr2R 22953342 intron CR32835 - chr2R 22953434 3` UTR CR32835 - chr2R 22953527 3` UTR CR32835 - chr2R_11_22950001 chr2R_22950001 RAL-913 1618 chr2R 22958764 22958811 chr2R 22963901 22963938 flea 9 5133 3.5 7.0 5.2 1.5 5174 chr2R 22958764 intergenic not near genes chr2R 22961351 intergenic not near genes chr2R 22963938 intergenic not near genes chr2R_9_22960001 chr2R_22960001 RAL-913 1619 chr2R 23061722 23061783 chr2R 23061866 23061927 24 142 1.0 9.5 5.2 3.9 205 chr2R 23061722 3` UTR l(2)06496 - chr2R 23061824 3` UTR l(2)06496 - chr2R 23061927 3` UTR l(2)06496 - chr2R_24_23060001 chr2R_23060001 RAL-913 1620 chr2R 23070373 23070438 chr2R 23070513 23070584 25 144 10.0 9.5 9.8 2.3 211 chr2R 23070373 intron l(2)k09913 + chr2R 23070478 intron l(2)k09913 + chr2R 23070584 intron l(2)k09913 + chr2R_25_23070001 chr2R_23070001 RAL-913 1621 chr2R 23108923 23108956 chr2R 23109055 23109088 9 131 8.5 17.0 12.8 0.7 165 chr2R 23108923 intergenic not near genes chr2R 23109006 intergenic not near genes chr2R 23109088 intergenic not near genes chr2R_9_23105001 chr2R_23105001 RAL-913 1622 chr2R 23117920 23117982 chr2R 23118090 23118152 24 168 8.0 7.5 7.8 2.7 232 chr2R 23117920 intergenic not near genes chr2R 23118036 intergenic not near genes chr2R 23118152 intergenic not near genes chr2R_24_23115001 chr2R_23115001 RAL-913 1623 chr2R 23134820 23134841 chr2R 23134920 23134941 14 122 10.0 10.5 10.2 1.2 121 chr2R 23134820 intergenic not near genes chr2R 23134880 intergenic not near genes chr2R 23134941 intergenic not near genes chr2R_14_23130001 chr2R_23130001 RAL-913 1624 chr2R 23157158 23157208 chr2R 23157302 23157351 14 139 9.5 12.5 11.0 1.2 193 chr2R 23157158 intron CG9899 + chr2R 23157254 intron CG9899 + chr2R 23157351 intron CG9899 + chr2R_14_23155001 chr2R_23155001 RAL-913 1625 chr2R 23184289 23184291 chr2R 23184390 23184426 5 117 2.5 9.5 6.0 0.7 137 chr2R 23184289 intron,intron CG34371 -,CG13539 + chr2R 23184358 intron,intron CG34371 -,CG13539 + chr2R 23184426 intron,5` UTR CG34371 -,CG13539 + chr2R_5_23180001 chr2R_23180001 RAL-913 1626 chr2R 23236767 23236851 chr2R 23236915 23236995 13 143 5.0 0.5 2.8 3.4 228 chr2R 23236767 intergenic not near genes chr2R 23236881 intergenic not near genes chr2R 23236995 intergenic not near genes chr2R_13_23235001 chr2R_23235001 RAL-913 1627 chr2R 23243156 23243232 chr2R 23243282 23243358 22 125 9.0 8.5 8.8 2.2 202 chr2R 23243156 intergenic not near genes chr2R 23243257 intergenic not near genes chr2R 23243358 intergenic not near genes chr2R_22_23240001 chr2R_23240001 RAL-913 1628 chr2R 23257504 23257532 chr2R 23257637 23257665 11 132 0.0 12.0 6.0 1.6 161 chr2R 23257504 intergenic not near genes chr2R 23257584 intergenic not near genes chr2R 23257665 intergenic not near genes chr2R_11_23255001 chr2R_23255001 RAL-913 1629 chr2R 23350478 23350486 chr2R 23350646 23350663 4 175 20.0 7.5 13.8 0.3 185 chr2R 23350478 intergenic not near genes chr2R 23350570 intergenic not near genes chr2R 23350663 intergenic not near genes chr2R_4_23350001 chr2R_23350001 RAL-913 1630 chr2R 23350487 23350516 chr2R 23350644 23350674 10 169 13.0 7.5 10.2 0.9 187 chr2R 23350487 intergenic not near genes chr2R 23350580 intergenic not near genes chr2R 23350674 intergenic not near genes chr2R_10_23350001 chr2R_23350001 RAL-913 1631 chr2R 23356234 23356309 chr2R 23356373 23356383 39 135 9.5 11.0 10.2 3.5 149 chr2R 23356234 3` UTR Rpi + chr2R 23356308 3` UTR Rpi + chr2R 23356383 3` UTR,3` UTR Rpi +,CG3500 - chr2R_39_23355001 chr2R_23355001 RAL-913 1632 chr2R 23402562 23402636 chr2R 23407688 23407762 flea 39 5126 10.5 9.5 10.0 3.5 5200 chr2R 23402562 intergenic CG3520 - chr2R 23405162 intergenic not near genes chr2R 23407762 intergenic not near genes chr2R_39_23405001 chr2R_23405001 RAL-913 1633 chr2R 23411000 23411084 chr2R 23411132 23411216 21 132 5.0 3.5 4.2 4.0 216 chr2R 23411000 intergenic not near genes chr2R 23411108 intergenic not near genes chr2R 23411216 intergenic not near genes chr2R_21_23410001 chr2R_23410001 RAL-913 1634 chr2R 23413519 23413553 chr2R 23413635 23413668 4 115 12.0 8.0 10.0 0.4 149 chr2R 23413519 intron CG9812 - chr2R 23413594 intron CG9812 - chr2R 23413668 intron CG9812 - chr2R_4_23410001 chr2R_23410001 RAL-913 1635 chr2R 23422601 23422679 chr2R 23422731 23422769 23 122 7.5 7.5 7.5 2.7 168 chr2R 23422601 intron CG9815 - chr2R 23422685 intron CG9815 - chr2R 23422769 intron CG9815 - chr2R_23_23420001 chr2R_23420001 RAL-913 1636 chr2R 23437184 23437228 chr2R 23437311 23437313 9 114 10.0 10.5 10.2 0.8 129 chr2R 23437184 intergenic not near genes chr2R 23437248 intergenic not near genes chr2R 23437313 intergenic not near genes chr2R_9_23435001 chr2R_23435001 RAL-913 1637 chr2R 23467535 23467583 chr2R 23467715 23467758 14 174 7.0 7.0 7.0 1.8 223 chr2R 23467535 intron CG43795 + chr2R 23467646 intron CG43795 + chr2R 23467758 intron CG43795 + chr2R_14_23465001 chr2R_23465001 RAL-913 1638 chr2R 23475386 23475673 chr2R 23475516 23475802 13 129 6.0 10.5 8.2 1.4 416 chr2R 23475386 intron CG43795 + chr2R 23475594 intron CG43795 + chr2R 23475802 intron,3` UTR CG43795 +,CG13557 - chr2R_13_23475001 chr2R_23475001 RAL-913 1639 chr2R 23493622 23493696 chr2R 23493758 23493797 21 130 6.5 8.0 7.2 2.6 175 chr2R 23493622 intergenic not near genes chr2R 23493710 intergenic not near genes chr2R 23493797 intergenic not near genes chr2R_21_23490001 chr2R_23490001 RAL-913 1640 chr2R 23522398 23522448 chr2R 23522492 23522537 21 115 4.0 6.5 5.2 3.4 139 chr2R 23522398 intron RabX1 - chr2R 23522468 intron RabX1 - chr2R 23522537 intron RabX1 - chr2R_21_23520001 chr2R_23520001 RAL-913 1641 chr2R 23523877 23523941 chr2R 23524305 23524369 39 428 9.5 10.5 10.0 3.5 492 chr2R 23523877 5` UTR mi + chr2R 23524123 5` UTR mi + chr2R 23524369 exon mi + chr2R_39_23520001 chr2R_23520001 RAL-913 1642 chr2R 23529568 23529604 chr2R 23537148 23537197 412 15 7592 5.5 7.5 6.5 2.0 7629 chr2R 23529568 intron bw - chr2R 23533382 intron bw - chr2R 23537197 exon bw - chr2R_15_23530001 chr2R_23530001 RAL-913 1643 chr2R 23546528 23546576 chr2R 23546747 23546815 27 231 14.0 8.0 11.0 2.2 287 chr2R 23546528 intron wmd - chr2R 23546672 intron wmd - chr2R 23546815 intron wmd - chr2R_27_23545001 chr2R_23545001 RAL-913 1644 chr2R 23588046 23588073 chr2R 23588174 23588201 7 128 6.0 10.0 8.0 0.8 155 chr2R 23588046 intron apt + chr2R 23588124 intron apt + chr2R 23588201 intron apt + chr2R_7_23585001 chr2R_23585001 RAL-913 1645 chr2R 23640756 23640834 chr2R 23640893 23640971 20 136 5.5 0.0 2.8 5.3 215 chr2R 23640756 intron retn + chr2R 23640864 intron retn + chr2R 23640971 intron retn + chr2R_20_23640001 chr2R_23640001 RAL-913 1646 chr2R 23671297 23671330 chr2R 23671429 23671462 15 132 8.0 12.0 10.0 1.4 165 chr2R 23671297 intron Pde8 + chr2R 23671380 intron Pde8 + chr2R 23671462 intron Pde8 + chr2R_15_23670001 chr2R_23670001 RAL-913 1647 chr2R 23744716 23744788 chr2R 23744845 23744917 33 129 9.5 10.5 10.0 3.0 201 chr2R 23744716 intron egl - chr2R 23744816 intron egl - chr2R 23744917 intron egl - chr2R_33_23740001 chr2R_23740001 RAL-913 1648 chr2R 23771226 23771308 chr2R 23771357 23771440 15 130 8.5 0.0 4.2 2.9 214 chr2R 23771226 intron CG9850 - chr2R 23771333 intron CG9850 - chr2R 23771440 intron CG9850 - chr2R_15_23770001 chr2R_23770001 RAL-913 1649 chr2R 23914260 23914329 chr2R 23921934 23922003 412 18 7672 8.0 6.0 7.0 2.2 7743 chr2R 23914260 exon kcc + chr2R 23918132 intron kcc + chr2R 23922003 exon kcc + chr2R_18_23915001 chr2R_23915001 RAL-913 1650 chr2R 23986482 23986540 chr2R 23986612 23986670 27 129 5.5 12.5 9.0 2.7 188 chr2R 23986482 intron Phm - chr2R 23986576 intron Phm - chr2R 23986670 intron,5` UTR Phm -,CG30178 + chr2R_27_23985001 chr2R_23985001 RAL-913 1651 chr2R 24031345 24031406 chr2R 24031479 24031540 32 133 9.0 12.5 10.8 2.7 195 chr2R 24031345 5` UTR CG30172 - chr2R 24031442 intergenic CG30172 -,Chi - chr2R 24031540 3` UTR Chi - chr2R_32_24030001 chr2R_24030001 RAL-913 1652 chr2R 24045179 24045254 chr2R 24045313 24045386 39 134 8.0 7.0 7.5 4.6 207 chr2R 24045179 exon tsr - chr2R 24045282 intron tsr - chr2R 24045386 intron tsr - chr2R_39_24045001 chr2R_24045001 RAL-913 1653 chr2R 24073466 24073536 chr2R 24073604 24073674 29 137 6.0 7.0 6.5 3.9 208 chr2R 24073466 3` UTR CG3209 + chr2R 24073570 intergenic CG3209 + chr2R 24073674 intergenic CG3209 + chr2R_29_24070001 chr2R_24070001 RAL-913 1654 chr2R 24147041 24147096 chr2R 24154649 24154724 412 24 7618 5.5 8.0 6.8 3.1 7683 chr2R 24147041 intron Dat + chr2R 24150882 intron Dat + chr2R 24154724 intron Dat + chr2R_24_24150001 chr2R_24150001 RAL-913 1655 chr2R 24177190 24177259 chr2R 24184725 24184794 412 35 7534 9.0 7.0 8.0 3.9 7604 chr2R 24177190 3` UTR Nop60B + chr2R 24180992 intron Nop60B + chr2R 24184794 intron Nop60B + chr2R_35_24180001 chr2R_24180001 RAL-913 1656 chr2R 24228346 24228428 chr2R 24228477 24228547 26 113 7.0 7.5 7.2 3.2 201 chr2R 24228346 intron CG30419 - chr2R 24228446 intron CG30419 - chr2R 24228547 intron CG30419 - chr2R_26_24225001 chr2R_24225001 RAL-913 1657 chr2R 24274776 24274861 chr2R 24274903 24274997 33 132 6.5 2.0 4.2 6.3 221 chr2R 24274776 intergenic not near genes chr2R 24274886 intergenic not near genes chr2R 24274997 intergenic not near genes chr2R_33_24270001 chr2R_24270001 RAL-913 1658 chr2R 24292790 24292848 chr2R 24292917 24292975 28 124 8.5 5.0 6.8 3.6 185 chr2R 24292790 intergenic not near genes chr2R 24292882 intergenic not near genes chr2R 24292975 intergenic not near genes chr2R_28_24290001 chr2R_24290001 RAL-913 1659 chr2R 24321096 24321166 chr2R 24321239 24321313 22 144 7.0 10.0 8.5 2.3 217 chr2R 24321096 intergenic not near genes chr2R 24321204 intergenic not near genes chr2R 24321313 intergenic not near genes chr2R_22_24320001 chr2R_24320001 RAL-913 1660 chr2R 24353389 24353423 chr2R 24361801 24361823 roo 15 8411 18.0 14.5 16.2 0.9 8434 chr2R 24353389 intron,intron bs +,CR44811 - chr2R 24357606 intron,intron bs +,CR44811 - chr2R 24361823 intron,intron bs +,CR44811 - chr2R_15_24355001 chr2R_24355001 RAL-913 1661 chr2R 24493037 24493086 chr2R 24493176 24493225 29 139 10.5 11.0 10.8 2.5 188 chr2R 24493037 intergenic CG13589 -,CG13590 - chr2R 24493131 intergenic CG13590 -,CG13589 - chr2R 24493225 intergenic CG13590 -,CG13589 - chr2R_29_24490001 chr2R_24490001 RAL-913 1662 chr2R 24509265 24509334 chr2R 24509400 24509469 22 133 2.5 6.5 4.5 4.0 204 chr2R 24509265 intergenic Letm1 - chr2R 24509367 intergenic Letm1 - chr2R 24509469 intergenic Letm1 - chr2R_22_24505001 chr2R_24505001 RAL-913 1663 chr2R 24548883 24548950 chr2R 24549012 24549032 32 123 5.5 4.5 5.0 5.3 149 chr2R 24548883 intron,intron CG4622 -,ITP + chr2R 24548958 intron,intron CG4622 -,ITP + chr2R 24549032 intron,intron CG4622 -,ITP + chr2R_32_24545001 chr2R_24545001 RAL-913 1664 chr2R 24590072 24590125 chr2R 24590213 24590262 18 134 9.0 8.5 8.8 1.8 190 chr2R 24590072 intron pio + chr2R 24590167 intron pio + chr2R 24590262 intron pio + chr2R_18_24590001 chr2R_24590001 RAL-913 1665 chr2R 24647546 24647613 chr2R 24655153 24655220 412 26 7606 10.5 8.0 9.2 2.5 7674 chr2R 24647546 intergenic not near genes chr2R 24651383 intergenic not near genes chr2R 24655220 intergenic not near genes chr2R_26_24650001 chr2R_24650001 RAL-913 1666 chr2R 24727866 24727915 chr2R 24735392 24735443 mdg1 15 7548 5.0 7.5 6.2 2.1 7577 chr2R 24727866 intron Mid1 - chr2R 24731654 intron Mid1 - chr2R 24735443 intron Mid1 - chr2R_15_24730001 chr2R_24730001 RAL-913 1667 chr2R 24739709 24739758 chr2R 24739840 24739879 8 130 10.0 9.5 9.8 0.7 170 chr2R 24739709 intergenic CR44828 - chr2R 24739794 intergenic CR44828 - chr2R 24739879 intergenic not near genes chr2R_8_24735001 chr2R_24735001 RAL-913 1668 chr2R 24739760 24739782 chr2R 24739837 24739913 8 122 6.5 9.0 7.8 0.9 153 chr2R 24739760 intergenic CR44828 - chr2R 24739836 intergenic CR44828 - chr2R 24739913 intergenic not near genes chr2R_8_24735001 chr2R_24735001 RAL-913 1669 chr2R 24763568 24763586 chr2R 24765594 24765612 G2 6 2024 11.5 8.0 9.8 0.6 2044 chr2R 24763568 exon CG3894 + chr2R 24764590 intron CG3894 + chr2R 24765612 exon CG3894 + chr2R_6_24760001 chr2R_24760001 RAL-913 1670 chr2R 24763591 24763630 chr2R 24765587 24765628 G2 11 2017 5.5 7.0 6.2 1.5 2037 chr2R 24763591 exon CG3894 + chr2R 24764610 intron CG3894 + chr2R 24765628 exon CG3894 + chr2R_11_24760001 chr2R_24760001 RAL-913 1671 chr2R 24844304 24844318 chr2R 24844440 24844454 5 136 10.5 5.0 7.8 0.6 150 chr2R 24844304 intergenic not near genes chr2R 24844379 intergenic not near genes chr2R 24844454 intergenic not near genes chr2R_5_24840001 chr2R_24840001 RAL-913 1672 chr2R 24844319 24844371 chr2R 24844437 24844491 19 127 5.5 4.0 4.8 3.3 172 chr2R 24844319 intergenic not near genes chr2R 24844405 intergenic not near genes chr2R 24844491 intergenic not near genes chr2R_19_24840001 chr2R_24840001 RAL-913 1673 chr2R 24884004 24884077 chr2R 24884136 24884209 39 131 11.0 8.0 9.5 3.7 205 chr2R 24884004 intron NKAIN + chr2R 24884106 intron NKAIN + chr2R 24884209 intron NKAIN + chr2R_39_24880001 chr2R_24880001 RAL-913 1674 chr2R 25014508 25014549 chr2R 25014624 25014675 7 116 12.5 7.5 10.0 0.6 167 chr2R 25014508 intron uzip + chr2R 25014592 intron uzip + chr2R 25014675 intron uzip + chr2R_7_25010001 chr2R_25010001 RAL-913 1675 chr2R 25105436 25105506 chr2R 25105589 25105657 35 150 8.5 8.0 8.2 3.8 221 chr2R 25105436 intron lov - chr2R 25105546 intron lov - chr2R 25105657 intron lov - chr2R_35_25105001 chr2R_25105001 RAL-913 1676 chr2R 25107957 25107989 chr2R 25108151 25108183 13 195 41.0 55.0 48.0 0.3 226 chr2R 25107957 intron lov - chr2R 25108070 intron lov - chr2R 25108183 intron lov - chr2R_13_25105001 chr2R_25105001 RAL-913 1677 chr2R 25107947 25108021 chr2R 25108187 25108215 8 200 48.5 46.5 47.5 0.2 268 chr2R 25107947 intron lov - chr2R 25108081 intron lov - chr2R 25108215 intron lov - chr2R_8_25105001 chr2R_25105001 RAL-913 1678 chr2R 25141614 25141672 chr2R 25159354 25159412 roo 21 17739 10.0 16.0 13.0 1.5 17798 chr2R 25141614 intergenic not near genes chr2R 25150513 intergenic not near genes chr2R 25159412 intergenic not near genes chr2R_21_25150001 chr2R_25150001 RAL-913 1679 chr2R 25253399 25253469 chr2R 25253525 25253596 16 127 7.0 10.5 8.8 1.6 197 chr2R 25253399 intron,intron CG9380 -,CG30428 + chr2R 25253498 intron,intron CG9380 -,CG30428 + chr2R 25253596 intron,5` UTR CG9380 -,CG30428 + chr2R_16_25250001 chr2R_25250001 RAL-913 1680 chr3L 30781 30840 chr3L 30992 31046 18 207 15.5 9.5 12.5 1.3 265 chr3L 30781 intergenic not near genes chr3L 30914 intergenic not near genes chr3L 31046 intergenic not near genes chr3L_18_30001 chr3L_30001 RAL-913 1681 chr3L 30842 30854 chr3L 30987 31050 4 187 10.0 8.5 9.2 0.4 208 chr3L 30842 intergenic not near genes chr3L 30946 intergenic not near genes chr3L 31050 intergenic not near genes chr3L_4_30001 chr3L_30001 RAL-913 1682 chr3L 68936 69011 chr3L 69073 69084 36 134 8.0 6.5 7.2 4.4 148 chr3L 68936 3` UTR Lsp1gamma + chr3L 69010 intergenic Lsp1gamma +,CR44510 + chr3L 69084 intergenic CR44510 +,Lsp1gamma + chr3L_36_65001 chr3L_65001 RAL-913 1683 chr3L 93741 93766 chr3L 93872 93890 5 130 20.0 12.0 16.0 0.3 149 chr3L 93741 intergenic not near genes chr3L 93816 intergenic not near genes chr3L 93890 intergenic not near genes chr3L_5_90001 chr3L_90001 RAL-913 1684 chr3L 93767 93816 chr3L 93870 93931 16 117 9.0 12.0 10.5 1.4 164 chr3L 93767 intergenic not near genes chr3L 93849 intergenic not near genes chr3L 93931 intergenic not near genes chr3L_16_90001 chr3L_90001 RAL-913 1685 chr3L 105952 106026 chr3L 106131 106205 37 178 4.5 9.0 6.8 4.7 253 chr3L 105952 intergenic not near genes chr3L 106078 intergenic not near genes chr3L 106205 intergenic not near genes chr3L_37_105001 chr3L_105001 RAL-913 1686 chr3L 108560 108625 chr3L 108753 108818 31 193 5.0 9.5 7.2 3.8 258 chr3L 108560 intergenic not near genes chr3L 108689 intergenic not near genes chr3L 108818 intergenic not near genes chr3L_31_105001 chr3L_105001 RAL-913 1687 chr3L 110169 110235 chr3L 119386 119452 roo 28 9217 15.5 10.0 12.8 2.0 9283 chr3L 110169 intergenic not near genes chr3L 114810 intergenic not near genes chr3L 119452 intergenic not near genes chr3L_28_110001 chr3L_110001 RAL-913 1688 chr3L 343150 343177 chr3L 343323 343350 10 172 17.5 19.5 18.5 0.5 200 chr3L 343150 intron Ptpmeg + chr3L 343250 intron Ptpmeg + chr3L 343350 intron Ptpmeg + chr3L_10_340001 chr3L_340001 RAL-913 1689 chr3L 402661 402712 chr3L 409744 409774 297 38 7097 11.0 6.0 8.5 4.0 7113 chr3L 402661 intergenic not near genes chr3L 406218 intergenic not near genes chr3L 409774 intergenic not near genes chr3L_38_405001 chr3L_405001 RAL-913 1690 chr3L 456157 456238 chr3L 456287 456367 26 127 7.5 9.0 8.2 2.8 210 chr3L 456157 intron klar - chr3L 456262 intron klar - chr3L 456367 intron klar - chr3L_26_455001 chr3L_455001 RAL-913 1691 chr3L 498464 498509 chr3L 498592 498637 20 127 10.0 1.5 5.8 2.9 173 chr3L 498464 intron klar - chr3L 498550 intron klar - chr3L 498637 intron klar - chr3L_20_495001 chr3L_495001 RAL-913 1692 chr3L 530904 530973 chr3L 531060 531129 20 154 5.5 9.5 7.5 2.4 225 chr3L 530904 intron klar - chr3L 531016 intron klar - chr3L 531129 intron klar - chr3L_20_530001 chr3L_530001 RAL-913 1693 chr3L 592915 592969 chr3L 593041 593095 29 126 7.5 9.0 8.2 3.2 180 chr3L 592915 intergenic MED14 + chr3L 593005 intergenic MED14 + chr3L 593095 intergenic MED14 + chr3L_29_590001 chr3L_590001 RAL-913 1694 chr3L 606838 606922 chr3L 606970 607051 28 129 0.0 0.0 0.0 28.0 213 chr3L 606838 intergenic Reg-2 - chr3L 606944 intergenic Reg-2 - chr3L 607051 intergenic Reg-2 - chr3L_28_605001 chr3L_605001 RAL-913 1695 chr3L 705834 705886 chr3L 705993 706045 25 159 11.0 9.5 10.2 2.2 211 chr3L 705834 intergenic CR44514 +,CG13895 - chr3L 705940 intergenic CG13895 -,CR44514 + chr3L 706045 3` UTR CG13895 - chr3L_25_705001 chr3L_705001 RAL-913 1696 chr3L 713426 713433 chr3L 713542 713559 4 124 12.5 7.0 9.8 0.4 133 chr3L 713426 intergenic not near genes chr3L 713492 intergenic not near genes chr3L 713559 intergenic not near genes chr3L_4_710001 chr3L_710001 RAL-913 1697 chr3L 720837 720848 chr3L 720973 720974 5 136 14.5 6.5 10.5 0.4 137 chr3L 720837 intergenic not near genes chr3L 720906 intergenic not near genes chr3L 720974 intergenic not near genes chr3L_5_720001 chr3L_720001 RAL-913 1698 chr3L 720849 720849 chr3L 720972 720990 4 133 14.5 6.0 10.2 0.4 141 chr3L 720849 intergenic not near genes chr3L 720920 intergenic not near genes chr3L 720990 intergenic not near genes chr3L_4_720001 chr3L_720001 RAL-913 1699 chr3L 720856 720899 chr3L 720959 721040 28 130 8.0 3.0 5.5 4.3 184 chr3L 720856 intergenic not near genes chr3L 720948 intergenic not near genes chr3L 721040 intergenic not near genes chr3L_28_720001 chr3L_720001 RAL-913 1700 chr3L 761172 761198 chr3L 761299 761325 13 127 13.0 14.0 13.5 0.9 153 chr3L 761172 intergenic not near genes chr3L 761248 intergenic not near genes chr3L 761325 intergenic not near genes chr3L_13_760001 chr3L_760001 RAL-913 1701 chr3L 789862 789944 chr3L 790397 790480 roo 15 535 0.5 0.5 0.5 10.0 618 chr3L 789862 intergenic not near genes chr3L 790171 intergenic not near genes chr3L 790480 intergenic not near genes chr3L_15_790001 chr3L_790001 RAL-913 1702 chr3L 822068 822076 chr3L 822191 822201 4 127 0.0 20.5 10.2 0.4 133 chr3L 822068 intergenic not near genes chr3L 822134 intergenic not near genes chr3L 822201 intergenic not near genes chr3L_4_820001 chr3L_820001 RAL-913 1703 chr3L 854131 854204 chr3L 854259 854332 23 128 7.0 4.0 5.5 3.5 201 chr3L 854131 exon dpr20 - chr3L 854232 intron dpr20 - chr3L 854332 exon dpr20 - chr3L_23_850001 chr3L_850001 RAL-913 1704 chr3L 857952 858031 chr3L 866483 866545 Tirant 19 8520 4.0 9.5 6.8 2.4 8593 chr3L 857952 intergenic not near genes chr3L 862248 intergenic not near genes chr3L 866545 5` UTR CG12502 + chr3L_19_860001 chr3L_860001 RAL-913 1705 chr3L 899995 900016 chr3L 900129 900150 8 134 0.0 20.0 10.0 0.7 155 chr3L 899995 intergenic not near genes chr3L 900072 intergenic not near genes chr3L 900150 intergenic not near genes chr3L_8_900001 chr3L_900001 RAL-913 1706 chr3L 901380 901448 chr3L 901514 901582 15 130 9.0 14.0 11.5 1.2 202 chr3L 901380 intergenic not near genes chr3L 901481 intergenic not near genes chr3L 901582 intergenic not near genes chr3L_15_900001 chr3L_900001 RAL-913 1707 chr3L 925147 925208 chr3L 932623 932684 mdg1 24 7475 7.5 9.5 8.5 2.5 7537 chr3L 925147 intron Glut1 + chr3L 928916 intron Glut1 + chr3L 932684 intron Glut1 + chr3L_24_925001 chr3L_925001 RAL-913 1708 chr3L 933862 933937 chr3L 934016 934075 36 153 12.0 8.0 10.0 3.3 213 chr3L 933862 intron Glut1 + chr3L 933968 intron Glut1 + chr3L 934075 intron Glut1 + chr3L_36_930001 chr3L_930001 RAL-913 1709 chr3L 939731 939742 chr3L 940904 940915 jockey 10 1173 13.5 5.0 9.2 1.0 1184 chr3L 939731 intron Glut1 + chr3L 940323 intron Glut1 + chr3L 940915 intron Glut1 + chr3L_10_940001 chr3L_940001 RAL-913 1710 chr3L 939744 939789 chr3L 940897 940955 jockey 11 1170 7.0 5.0 6.0 1.6 1211 chr3L 939744 intron Glut1 + chr3L 940350 intron Glut1 + chr3L 940955 intron Glut1 + chr3L_11_940001 chr3L_940001 RAL-913 1711 chr3L 1003009 1003046 chr3L 1003136 1003173 17 126 19.5 13.5 16.5 1.0 164 chr3L 1003009 intron trio - chr3L 1003091 intron trio - chr3L 1003173 intron trio - chr3L_17_1000001 chr3L_1000001 RAL-913 1712 chr3L 1003047 1003063 chr3L 1003126 1003190 9 121 13.0 12.5 12.8 0.7 143 chr3L 1003047 intron trio - chr3L 1003118 intron trio - chr3L 1003190 intron trio - chr3L_9_1000001 chr3L_1000001 RAL-913 1713 chr3L 1010948 1010958 chr3L 1011079 1011089 4 130 23.5 7.5 15.5 0.2 141 chr3L 1010948 intron trio - chr3L 1011018 intron trio - chr3L 1011089 intron trio - chr3L_4_1010001 chr3L_1010001 RAL-913 1714 chr3L 1010960 1011016 chr3L 1011078 1011127 27 128 11.5 7.0 9.2 2.6 167 chr3L 1010960 intron trio - chr3L 1011044 intron trio - chr3L 1011127 intron trio - chr3L_27_1010001 chr3L_1010001 RAL-913 1715 chr3L 1014978 1015053 chr3L 1015140 1015209 28 152 9.0 5.5 7.2 3.4 231 chr3L 1014978 intron trio - chr3L 1015094 intron trio - chr3L 1015209 intron trio - chr3L_28_1015001 chr3L_1015001 RAL-913 1716 chr3L 1031538 1031568 chr3L 1031664 1031670 9 122 14.5 8.0 11.2 0.7 132 chr3L 1031538 intron trio - chr3L 1031604 intron trio - chr3L 1031670 intron trio - chr3L_9_1030001 chr3L_1030001 RAL-913 1717 chr3L 1031571 1031615 chr3L 1031662 1031676 16 114 12.0 8.0 10.0 1.5 105 chr3L 1031571 intron trio - chr3L 1031624 intron trio - chr3L 1031676 intron trio - chr3L_16_1030001 chr3L_1030001 RAL-913 1718 chr3L 1033317 1033345 chr3L 1033436 1033497 8 143 0.0 0.0 0.0 8.0 180 chr3L 1033317 intron trio - chr3L 1033407 intron trio - chr3L 1033497 intron trio - chr3L_8_1030001 chr3L_1030001 RAL-913 1719 chr3L 1040506 1040580 chr3L 1040640 1040714 25 134 7.5 6.0 6.8 3.2 208 chr3L 1040506 intron bab1 - chr3L 1040610 intron bab1 - chr3L 1040714 intron bab1 - chr3L_25_1040001 chr3L_1040001 RAL-913 1720 chr3L 1047309 1047327 chr3L 1055171 1055188 412 7 7860 20.0 5.5 12.8 0.5 7879 chr3L 1047309 intron bab1 - chr3L 1051248 intron bab1 - chr3L 1055188 intron bab1 - chr3L_7_1050001 chr3L_1050001 RAL-913 1721 chr3L 1047328 1047335 chr3L 1055169 1055196 412 4 7851 18.5 5.5 12.0 0.3 7868 chr3L 1047328 intron bab1 - chr3L 1051262 intron bab1 - chr3L 1055196 intron bab1 - chr3L_4_1050001 chr3L_1050001 RAL-913 1722 chr3L 1047336 1047384 chr3L 1055167 1055219 412 15 7842 10.0 4.5 7.2 1.8 7883 chr3L 1047336 intron bab1 - chr3L 1051278 intron bab1 - chr3L 1055219 intron bab1 - chr3L_15_1050001 chr3L_1050001 RAL-913 1723 chr3L 1103968 1104014 chr3L 1104209 1104255 10 239 6.0 10.0 8.0 1.1 287 chr3L 1103968 intergenic not near genes chr3L 1104112 intergenic not near genes chr3L 1104255 intergenic not near genes chr3L_10_1100001 chr3L_1100001 RAL-913 1724 chr3L 1109585 1109657 chr3L 1109723 1109795 28 137 13.0 7.5 10.2 2.5 210 chr3L 1109585 intergenic not near genes chr3L 1109690 intergenic not near genes chr3L 1109795 intergenic not near genes chr3L_28_1105001 chr3L_1105001 RAL-913 1725 chr3L 1145190 1145243 chr3L 1145319 1145372 21 127 10.0 0.0 5.0 3.5 182 chr3L 1145190 intron bab2 - chr3L 1145281 intron bab2 - chr3L 1145372 intron bab2 - chr3L_21_1145001 chr3L_1145001 RAL-913 1726 chr3L 1154082 1154157 chr3L 1163285 1163342 roo 31 9200 10.5 11.5 11.0 2.6 9260 chr3L 1154082 intron bab2 - chr3L 1158712 intron bab2 - chr3L 1163342 intron bab2 - chr3L_31_1155001 chr3L_1155001 RAL-913 1727 chr3L 1166972 1167002 chr3L 1167099 1167129 7 127 11.5 9.5 10.5 0.6 157 chr3L 1166972 intron bab2 - chr3L 1167050 intron bab2 - chr3L 1167129 intron bab2 - chr3L_7_1165001 chr3L_1165001 RAL-913 1728 chr3L 1177600 1177664 chr3L 1177727 1177792 7 128 11.0 13.0 12.0 0.5 192 chr3L 1177600 intergenic bab2 - chr3L 1177696 intergenic bab2 - chr3L 1177792 intergenic not near genes chr3L_7_1175001 chr3L_1175001 RAL-913 1729 chr3L 1182806 1182810 chr3L 1182956 1182960 4 150 24.5 17.5 21.0 0.2 154 chr3L 1182806 intergenic not near genes chr3L 1182883 intergenic not near genes chr3L 1182960 intergenic not near genes chr3L_4_1180001 chr3L_1180001 RAL-913 1730 chr3L 1194491 1194545 chr3L 1194636 1194690 11 145 4.5 12.5 8.5 1.2 199 chr3L 1194491 intergenic LysX - chr3L 1194590 intergenic LysX - chr3L 1194690 intergenic LysX - chr3L_11_1190001 chr3L_1190001 RAL-913 1731 chr3L 1219550 1219613 chr3L 1227327 1227396 412 19 7775 9.0 5.0 7.0 2.4 7846 chr3L 1219550 intron mwh + chr3L 1223473 intron mwh + chr3L 1227396 intron mwh + chr3L_19_1220001 chr3L_1220001 RAL-913 1732 chr3L 1260111 1260157 chr3L 1260241 1260287 12 130 24.0 25.0 24.5 0.5 176 chr3L 1260111 intron CG9134 + chr3L 1260199 intron CG9134 + chr3L 1260287 intron CG9134 + chr3L_12_1260001 chr3L_1260001 RAL-913 1733 chr3L 1275062 1275112 chr3L 1275192 1275242 12 129 27.0 18.0 22.5 0.5 180 chr3L 1275062 intergenic not near genes chr3L 1275152 intergenic not near genes chr3L 1275242 intergenic not near genes chr3L_12_1275001 chr3L_1275001 RAL-913 1734 chr3L 1310991 1311054 chr3L 1315801 1315864 19 4816 38.5 52.0 45.2 0.4 4873 chr3L 1310991 exon CG2469 + chr3L 1313428 intergenic CG9186 -,CG9153 + chr3L 1315864 exon CG9153 + chr3L_19_1310001 chr3L_1310001 RAL-913 1735 chr3L 1347119 1347170 chr3L 1347244 1347305 11 127 22.0 17.0 19.5 0.5 186 chr3L 1347119 intron Ptp61F - chr3L 1347212 intron Ptp61F - chr3L 1347305 intron Ptp61F - chr3L_11_1345001 chr3L_1345001 RAL-913 1736 chr3L 1374393 1374400 chr3L 1374520 1374524 4 126 37.0 36.0 36.5 0.1 131 chr3L 1374393 intron,intron Ptp61F -,ru + chr3L 1374458 intron,intron Ptp61F -,ru + chr3L 1374524 intron,intron Ptp61F -,ru + chr3L_4_1370001 chr3L_1370001 RAL-913 1737 chr3L 1396699 1396759 chr3L 1396833 1396886 25 128 8.5 12.0 10.2 2.2 187 chr3L 1396699 intron Ptp61F - chr3L 1396792 intron Ptp61F - chr3L 1396886 intron Ptp61F - chr3L_25_1395001 chr3L_1395001 RAL-913 1738 chr3L 1424754 1424761 chr3L 1430036 1430057 Rt1a 6 5291 2.0 11.0 6.5 0.8 5303 chr3L 1424754 intron Ptp61F - chr3L 1427406 intron Ptp61F - chr3L 1430057 intron Ptp61F - chr3L_6_1425001 chr3L_1425001 RAL-913 1739 chr3L 1463375 1463440 chr3L 1463506 1463565 25 121 1.0 10.0 5.5 3.8 190 chr3L 1463375 intron Ptp61F - chr3L 1463470 intron Ptp61F - chr3L 1463565 intron Ptp61F - chr3L_25_1460001 chr3L_1460001 RAL-913 1740 chr3L 1473195 1473233 chr3L 1473321 1473359 10 124 15.5 21.0 18.2 0.5 164 chr3L 1473195 5` UTR Ptp61F - chr3L 1473277 5` UTR Ptp61F - chr3L 1473359 5` UTR Ptp61F - chr3L_10_1470001 chr3L_1470001 RAL-913 1741 chr3L 1477348 1477422 chr3L 1477488 1477554 5 137 25.0 21.5 23.2 0.2 206 chr3L 1477348 intron stet - chr3L 1477451 intron stet - chr3L 1477554 intron stet - chr3L_5_1475001 chr3L_1475001 RAL-913 1742 chr3L 1485687 1485739 chr3L 1486908 1486960 1360 14 1218 12.0 9.5 10.8 1.2 1273 chr3L 1485687 intron stet - chr3L 1486324 intron stet - chr3L 1486960 intron stet - chr3L_14_1485001 chr3L_1485001 RAL-913 1743 chr3L 1501961 1502007 chr3L 1502082 1502107 9 123 23.0 19.5 21.2 0.4 146 chr3L 1501961 intron pUf68 - chr3L 1502034 intron pUf68 - chr3L 1502107 intron pUf68 - chr3L_9_1500001 chr3L_1500001 RAL-913 1744 chr3L 1505959 1506023 chr3L 1513606 1513670 17.6 30 7647 8.0 9.0 8.5 3.2 7711 chr3L 1505959 intron,intron Psa +,cue - chr3L 1509814 intron,intron Psa +,cue - chr3L 1513670 intron,intron Psa +,cue - chr3L_30_1505001 chr3L_1505001 RAL-913 1745 chr3L 1536845 1536875 chr3L 1536979 1537009 10 134 27.5 30.5 29.0 0.3 164 chr3L 1536845 intergenic CG12091 -,CG7852 + chr3L 1536927 intergenic CG12091 -,CG7852 + chr3L 1537009 intergenic CG7852 +,CG12091 - chr3L_10_1535001 chr3L_1535001 RAL-913 1746 chr3L 1571220 1571494 chr3L 1571351 1571630 18 133 20.0 18.5 19.2 0.9 410 chr3L 1571220 intron CG12004 + chr3L 1571425 intron CG12004 + chr3L 1571630 intron CG12004 + chr3L_18_1570001 chr3L_1570001 RAL-913 1747 chr3L 1585883 1585937 chr3L 1586014 1586068 16 131 15.0 6.0 10.5 1.4 185 chr3L 1585883 intron CG13917 + chr3L 1585976 intron CG13917 + chr3L 1586068 intron CG13917 + chr3L_16_1585001 chr3L_1585001 RAL-913 1748 chr3L 1662857 1662924 chr3L 1662983 1663050 10 126 24.5 23.5 24.0 0.4 193 chr3L 1662857 intron CG7971 - chr3L 1662954 intron CG7971 - chr3L 1663050 intron CG7971 - chr3L_10_1660001 chr3L_1660001 RAL-913 1749 chr3L 1683535 1683593 chr3L 1683646 1683725 11 125 16.0 14.0 15.0 0.7 190 chr3L 1683535 intron CG7991 + chr3L 1683630 intron CG7991 + chr3L 1683725 intron CG7991 + chr3L_11_1680001 chr3L_1680001 RAL-913 1750 chr3L 1683987 1684013 chr3L 1684105 1684141 4 124 11.5 9.5 10.5 0.3 154 chr3L 1683987 intron CG7991 + chr3L 1684064 intron CG7991 + chr3L 1684141 intron CG7991 + chr3L_4_1680001 chr3L_1680001 RAL-913 1751 chr3L 1684033 1684040 chr3L 1684098 1684168 4 111 6.5 8.5 7.5 0.5 135 chr3L 1684033 intron CG7991 + chr3L 1684100 intron CG7991 + chr3L 1684168 intron CG7991 + chr3L_4_1680001 chr3L_1680001 RAL-913 1752 chr3L 1688198 1688261 chr3L 1688377 1688440 11 179 25.5 18.5 22.0 0.5 242 chr3L 1688198 intron CG7991 + chr3L 1688319 intron CG7991 + chr3L 1688440 intron CG7991 + chr3L_11_1685001 chr3L_1685001 RAL-913 1753 chr3L 1697465 1697485 chr3L 1697595 1697605 8 129 28.5 10.0 19.2 0.4 140 chr3L 1697465 intron CG7991 + chr3L 1697535 intron CG7991 + chr3L 1697605 intron CG7991 + chr3L_8_1695001 chr3L_1695001 RAL-913 1754 chr3L 1697489 1697532 chr3L 1697590 1697657 16 127 19.0 10.5 14.8 1.0 168 chr3L 1697489 intron CG7991 + chr3L 1697573 intron CG7991 + chr3L 1697657 intron CG7991 + chr3L_16_1695001 chr3L_1695001 RAL-913 1755 chr3L 1729133 1729211 chr3L 1729273 1729351 15 136 30.5 29.0 29.8 0.5 218 chr3L 1729133 intron drpr - chr3L 1729242 intron drpr - chr3L 1729351 intron drpr - chr3L_15_1725001 chr3L_1725001 RAL-913 1756 chr3L 1740819 1740875 chr3L 1741104 1741168 pogo 27 289 14.0 16.0 15.0 1.7 349 chr3L 1740819 intron Gk + chr3L 1740994 intron Gk + chr3L 1741168 intron Gk + chr3L_27_1740001 chr3L_1740001 RAL-913 1757 chr3L 1805654 1805671 chr3L 1805878 1805895 6 223 11.0 8.0 9.5 0.6 241 chr3L 1805654 exon CG42676 + chr3L 1805774 intron CG42676 + chr3L 1805895 intron CG42676 + chr3L_6_1805001 chr3L_1805001 RAL-913 1758 chr3L 1805673 1805712 chr3L 1805877 1805936 11 217 4.0 7.5 5.8 1.6 263 chr3L 1805673 exon CG42676 + chr3L 1805804 intron CG42676 + chr3L 1805936 intron CG42676 + chr3L_11_1805001 chr3L_1805001 RAL-913 1759 chr3L 1809959 1810027 chr3L 1810200 1810267 26 241 6.0 5.0 5.5 4.0 308 chr3L 1809959 intergenic not near genes chr3L 1810113 intergenic GV1 + chr3L 1810267 intergenic GV1 + chr3L_26_1810001 chr3L_1810001 RAL-913 1760 chr3L 1817053 1817106 chr3L 1817182 1817235 14 129 18.0 23.5 20.8 0.6 182 chr3L 1817053 intron GV1 + chr3L 1817144 intron GV1 + chr3L 1817235 intron GV1 + chr3L_14_1815001 chr3L_1815001 RAL-913 1761 chr3L 1853003 1853046 chr3L 1853137 1853180 15 134 28.0 24.5 26.2 0.6 177 chr3L 1853003 intron CG13936 - chr3L 1853092 intron CG13936 - chr3L 1853180 intron CG13936 - chr3L_15_1850001 chr3L_1850001 RAL-913 1762 chr3L 1922425 1922431 chr3L 1922543 1922559 4 120 19.0 9.5 14.2 0.3 134 chr3L 1922425 intron Dbx + chr3L 1922492 intron Dbx + chr3L 1922559 intron Dbx + chr3L_4_1920001 chr3L_1920001 RAL-913 1763 chr3L 1922432 1922453 chr3L 1922533 1922581 8 112 14.5 9.5 12.0 0.6 149 chr3L 1922432 intron Dbx + chr3L 1922506 intron Dbx + chr3L 1922581 intron Dbx + chr3L_8_1920001 chr3L_1920001 RAL-913 1764 chr3L 1922962 1923018 chr3L 1923102 1923148 14 137 16.5 29.0 22.8 0.6 186 chr3L 1922962 intron Dbx + chr3L 1923055 intron Dbx + chr3L 1923148 intron Dbx + chr3L_14_1920001 chr3L_1920001 RAL-913 1765 chr3L 1924914 1924974 chr3L 1925102 1925161 17 188 8.5 9.0 8.8 1.7 247 chr3L 1924914 exon Dbx + chr3L 1925038 intron Dbx + chr3L 1925161 intron Dbx + chr3L_17_1925001 chr3L_1925001 RAL-913 1766 chr3L 1991071 1991152 chr3L 1991200 1991279 7 129 17.0 16.5 16.8 0.4 208 chr3L 1991071 intergenic not near genes chr3L 1991175 intergenic not near genes chr3L 1991279 intergenic not near genes chr3L_7_1990001 chr3L_1990001 RAL-913 1767 chr3L 1993029 1993102 chr3L 1993162 1993235 23 132 21.0 25.0 23.0 1.0 206 chr3L 1993029 intergenic not near genes chr3L 1993132 intergenic not near genes chr3L 1993235 intergenic not near genes chr3L_23_1990001 chr3L_1990001 RAL-913 1768 chr3L 2013607 2013684 chr3L 2013735 2013808 34 125 22.0 23.5 22.8 1.4 201 chr3L 2013607 intergenic not near genes chr3L 2013708 intergenic not near genes chr3L 2013808 intergenic not near genes chr3L_34_2010001 chr3L_2010001 RAL-913 1769 chr3L 2015726 2015747 chr3L 2015854 2015870 6 127 15.0 0.0 7.5 0.7 144 chr3L 2015726 intergenic not near genes chr3L 2015798 intergenic not near genes chr3L 2015870 intergenic not near genes chr3L_6_2015001 chr3L_2015001 RAL-913 1770 chr3L 2020477 2020537 chr3L 2020604 2020664 22 126 26.0 22.5 24.2 0.9 187 chr3L 2020477 intergenic CG42357 - chr3L 2020570 exon CG42357 - chr3L 2020664 exon CG42357 - chr3L_22_2020001 chr3L_2020001 RAL-913 1771 chr3L 2035226 2035288 chr3L 2035352 2035419 15 126 20.5 14.5 17.5 0.8 193 chr3L 2035226 intergenic not near genes chr3L 2035322 intergenic not near genes chr3L 2035419 intergenic not near genes chr3L_15_2035001 chr3L_2035001 RAL-913 1772 chr3L 2108195 2108269 chr3L 2113459 2113523 copia 26 5260 5.5 12.0 8.8 2.7 5328 chr3L 2108195 intron sls - chr3L 2110859 intron sls - chr3L 2113523 intron sls - chr3L_26_2110001 chr3L_2110001 RAL-913 1773 chr3L 2139173 2139214 chr3L 2139304 2139325 6 128 26.0 28.5 27.2 0.2 152 chr3L 2139173 intron zormin - chr3L 2139249 intron zormin - chr3L 2139325 intron zormin - chr3L_6_2135001 chr3L_2135001 RAL-913 1774 chr3L 2168738 2168799 chr3L 2168879 2168940 25 140 8.5 12.5 10.5 2.2 202 chr3L 2168738 exon CG15879 - chr3L 2168839 intron CG15879 - chr3L 2168940 intron CG15879 - chr3L_25_2165001 chr3L_2165001 RAL-913 1775 chr3L 2199785 2199819 chr3L 2199911 2199945 8 126 7.5 11.0 9.2 0.8 160 chr3L 2199785 intergenic not near genes chr3L 2199865 intergenic not near genes chr3L 2199945 intergenic not near genes chr3L_8_2195001 chr3L_2195001 RAL-913 1776 chr3L 2218440 2218456 chr3L 2218556 2218572 4 115 30.5 27.0 28.8 0.1 132 chr3L 2218440 intergenic not near genes chr3L 2218506 intergenic not near genes chr3L 2218572 intergenic not near genes chr3L_4_2215001 chr3L_2215001 RAL-913 1777 chr3L 2218462 2218498 chr3L 2218553 2218603 7 107 29.0 27.0 28.0 0.2 141 chr3L 2218462 intergenic not near genes chr3L 2218532 intergenic not near genes chr3L 2218603 intergenic not near genes chr3L_7_2215001 chr3L_2215001 RAL-913 1778 chr3L 2278990 2279067 chr3L 2279191 2279264 21 199 0.0 9.5 4.8 3.6 274 chr3L 2278990 intergenic not near genes chr3L 2279127 intergenic not near genes chr3L 2279264 intergenic not near genes chr3L_21_2275001 chr3L_2275001 RAL-913 1779 chr3L 2282946 2283020 chr3L 2283072 2283140 14 125 32.0 31.0 31.5 0.4 194 chr3L 2282946 5` UTR MsR2 + chr3L 2283043 5` UTR MsR2 + chr3L 2283140 5` UTR MsR2 + chr3L_14_2280001 chr3L_2280001 RAL-913 1780 chr3L 2293347 2293420 chr3L 2293477 2293550 13 128 24.0 23.0 23.5 0.5 203 chr3L 2293347 intron MsR2 + chr3L 2293448 intron MsR2 + chr3L 2293550 intron MsR2 + chr3L_13_2290001 chr3L_2290001 RAL-913 1781 chr3L 2307956 2308027 chr3L 2308112 2308183 35 155 10.0 13.5 11.8 2.7 227 chr3L 2307956 intergenic not near genes chr3L 2308070 intergenic not near genes chr3L 2308183 intergenic not near genes chr3L_35_2305001 chr3L_2305001 RAL-913 1782 chr3L 2331558 2331590 chr3L 2331685 2331717 7 127 26.5 29.0 27.8 0.2 159 chr3L 2331558 intron MsR1 + chr3L 2331638 intron MsR1 + chr3L 2331717 intron MsR1 + chr3L_7_2330001 chr3L_2330001 RAL-913 1783 chr3L 2331599 2331609 chr3L 2331669 2331731 5 108 23.0 25.5 24.2 0.2 132 chr3L 2331599 intron MsR1 + chr3L 2331665 intron MsR1 + chr3L 2331731 intron MsR1 + chr3L_5_2330001 chr3L_2330001 RAL-913 1784 chr3L 2347028 2347100 chr3L 2347167 2347219 23 150 6.0 4.5 5.2 3.7 191 chr3L 2347028 intergenic not near genes chr3L 2347124 intergenic not near genes chr3L 2347219 intergenic not near genes chr3L_23_2345001 chr3L_2345001 RAL-913 1785 chr3L 2355103 2355166 chr3L 2355237 2355300 18 130 18.0 14.5 16.2 1.0 197 chr3L 2355103 intergenic not near genes chr3L 2355202 intergenic not near genes chr3L 2355300 intergenic not near genes chr3L_18_2355001 chr3L_2355001 RAL-913 1786 chr3L 2357644 2357720 chr3L 2362577 2362578 15 4925 21.0 15.5 18.2 0.8 4934 chr3L 2357644 intergenic not near genes chr3L 2360111 intergenic CG13801 + chr3L 2362578 exon CG13801 + chr3L_15_2360001 chr3L_2360001 RAL-913 1787 chr3L 2411298 2411338 chr3L 2411424 2411468 20 125 4.0 7.0 5.5 3.1 170 chr3L 2411298 intron CG45186 + chr3L 2411383 intron CG45186 + chr3L 2411468 intron CG45186 + chr3L_20_2410001 chr3L_2410001 RAL-913 1788 chr3L 2417755 2417771 chr3L 2417880 2417880 4 123 35.0 30.0 32.5 0.1 125 chr3L 2417755 intron CG45186 + chr3L 2417818 intron CG45186 + chr3L 2417880 intron CG45186 + chr3L_4_2415001 chr3L_2415001 RAL-913 1789 chr3L 2447462 2447523 chr3L 2456668 2456695 roo 31 9203 8.0 11.5 9.8 2.9 9233 chr3L 2447462 intron CG45186 + chr3L 2452078 intron CG45186 + chr3L 2456695 intron CG45186 + chr3L_31_2450001 chr3L_2450001 RAL-913 1790 chr3L 2467405 2467483 chr3L 2467552 2467639 12 150 3.5 0.0 1.8 4.3 234 chr3L 2467405 intron CG45186 + chr3L 2467522 intron CG45186 + chr3L 2467639 intron CG45186 + chr3L_12_2465001 chr3L_2465001 RAL-913 1791 chr3L 2479346 2479477 chr3L 2479474 2479620 7 141 20.5 20.5 20.5 0.3 274 chr3L 2479346 intron CG45186 + chr3L 2479483 intron CG45186 + chr3L 2479620 intron CG45186 + chr3L_7_2475001 chr3L_2475001 RAL-913 1792 chr3L 2480260 2480314 chr3L 2480410 2480446 7 143 21.0 18.5 19.8 0.3 186 chr3L 2480260 intron CG45186 + chr3L 2480353 intron CG45186 + chr3L 2480446 intron CG45186 + chr3L_7_2480001 chr3L_2480001 RAL-913 1793 chr3L 2493775 2493846 chr3L 2493903 2493984 19 137 12.0 9.0 10.5 1.7 209 chr3L 2493775 intron CG45186 + chr3L 2493880 intron CG45186 + chr3L 2493984 intron CG45186 + chr3L_19_2490001 chr3L_2490001 RAL-913 1794 chr3L 2502056 2502064 chr3L 2502201 2502209 4 144 28.5 28.0 28.2 0.1 153 chr3L 2502056 intron CG16758 - chr3L 2502132 intron CG16758 - chr3L 2502209 intron CG16758 - chr3L_4_2500001 chr3L_2500001 RAL-913 1795 chr3L 2502068 2502139 chr3L 2502197 2502256 6 132 25.0 27.0 26.0 0.2 188 chr3L 2502068 intron CG16758 - chr3L 2502162 intron CG16758 - chr3L 2502256 intron CG16758 - chr3L_6_2500001 chr3L_2500001 RAL-913 1796 chr3L 2506336 2506389 chr3L 2506593 2506646 16 257 19.0 25.5 22.2 0.7 310 chr3L 2506336 3` UTR Spn - chr3L 2506491 3` UTR Spn - chr3L 2506646 3` UTR Spn - chr3L_16_2505001 chr3L_2505001 RAL-913 1797 chr3L 2515391 2515417 chr3L 2515523 2515549 7 132 30.5 36.0 33.2 0.2 158 chr3L 2515391 intron Spn - chr3L 2515470 intron Spn - chr3L 2515549 intron Spn - chr3L_7_2515001 chr3L_2515001 RAL-913 1798 chr3L 2518194 2518261 chr3L 2518323 2518390 17 129 23.0 15.5 19.2 0.8 196 chr3L 2518194 intron,intron Spn -,CR45170 + chr3L 2518292 intron,intron Spn -,CR45170 + chr3L 2518390 intron,5` UTR Spn -,CR45170 + chr3L_17_2515001 chr3L_2515001 RAL-913 1799 chr3L 2523466 2523485 chr3L 2523596 2523615 8 127 30.0 25.0 27.5 0.3 149 chr3L 2523466 intron Spn - chr3L 2523540 intron Spn - chr3L 2523615 intron Spn - chr3L_8_2520001 chr3L_2520001 RAL-913 1800 chr3L 2523489 2523533 chr3L 2523589 2523663 5 122 23.0 26.0 24.5 0.2 174 chr3L 2523489 intron Spn - chr3L 2523576 intron Spn - chr3L 2523663 intron Spn - chr3L_5_2520001 chr3L_2520001 RAL-913 1801 chr3L 2533615 2533671 chr3L 2533747 2533803 16 128 10.0 14.5 12.2 1.2 188 chr3L 2533615 intron Spn - chr3L 2533709 intron Spn - chr3L 2533803 intron Spn - chr3L_16_2530001 chr3L_2530001 RAL-913 1802 chr3L 2546712 2546793 chr3L 2546851 2546932 7 139 3.5 1.5 2.5 2.0 220 chr3L 2546712 intron Spn - chr3L 2546822 intron Spn - chr3L 2546932 intron Spn - chr3L_7_2545001 chr3L_2545001 RAL-913 1803 chr3L 2548212 2548275 chr3L 2548351 2548413 14 139 21.5 19.5 20.5 0.7 201 chr3L 2548212 intron Spn - chr3L 2548312 intron Spn - chr3L 2548413 intron Spn - chr3L_14_2545001 chr3L_2545001 RAL-913 1804 chr3L 2575960 2575987 chr3L 2576093 2576120 7 133 19.5 12.5 16.0 0.4 160 chr3L 2575960 intron msn - chr3L 2576040 intron msn - chr3L 2576120 intron msn - chr3L_7_2575001 chr3L_2575001 RAL-913 1805 chr3L 2609630 2609650 chr3L 2609756 2609776 5 126 18.5 21.0 19.8 0.2 146 chr3L 2609630 intron Pxn - chr3L 2609703 intron Pxn - chr3L 2609776 intron Pxn - chr3L_5_2605001 chr3L_2605001 RAL-913 1806 chr3L 2674724 2674807 chr3L 2674855 2674938 23 129 14.0 10.0 12.0 1.8 214 chr3L 2674724 intron Fife - chr3L 2674831 intron Fife - chr3L 2674938 intron Fife - chr3L_23_2670001 chr3L_2670001 RAL-913 1807 chr3L 2678741 2678791 chr3L 2678869 2678906 6 122 8.5 4.0 6.2 0.8 165 chr3L 2678741 exon Fife - chr3L 2678824 intron Fife - chr3L 2678906 exon Fife - chr3L_6_2675001 chr3L_2675001 RAL-913 1808 chr3L 2680464 2680521 chr3L 2680594 2680631 12 128 18.0 10.0 14.0 0.8 167 chr3L 2680464 intron Fife - chr3L 2680548 intron Fife - chr3L 2680631 intron Fife - chr3L_12_2680001 chr3L_2680001 RAL-913 1809 chr3L 2682971 2683031 chr3L 2683102 2683163 4 131 16.5 23.0 19.8 0.2 192 chr3L 2682971 intron Fife - chr3L 2683067 intron Fife - chr3L 2683163 intron Fife - chr3L_4_2680001 chr3L_2680001 RAL-913 1810 chr3L 2683922 2683978 chr3L 2684038 2684107 18 126 13.0 10.5 11.8 1.4 185 chr3L 2683922 intron Fife - chr3L 2684014 intron Fife - chr3L 2684107 intron Fife - chr3L_18_2680001 chr3L_2680001 RAL-913 1811 chr3L 2699478 2699548 chr3L 2699626 2699696 12 148 21.0 22.0 21.5 0.5 218 chr3L 2699478 intron Fife - chr3L 2699587 intron Fife - chr3L 2699696 intron Fife - chr3L_12_2695001 chr3L_2695001 RAL-913 1812 chr3L 2719497 2719559 chr3L 2719649 2719711 28 151 9.0 8.0 8.5 2.9 214 chr3L 2719497 3` UTR Mrtf - chr3L 2719604 3` UTR Mrtf - chr3L 2719711 3` UTR Mrtf - chr3L_28_2715001 chr3L_2715001 RAL-913 1813 chr3L 2751414 2751457 chr3L 2755759 2755797 F-element 23 4345 13.5 19.5 16.5 1.3 4383 chr3L 2751414 intron Mrtf - chr3L 2753606 intron Mrtf - chr3L 2755797 intron Mrtf - chr3L_23_2750001 chr3L_2750001 RAL-913 1814 chr3L 2762585 2762650 chr3L 2762716 2762781 17 129 19.0 19.0 19.0 0.8 196 chr3L 2762585 intron Mrtf - chr3L 2762683 intron Mrtf - chr3L 2762781 intron Mrtf - chr3L_17_2760001 chr3L_2760001 RAL-913 1815 chr3L 2795678 2795737 chr3L 2795852 2795910 12 173 19.0 20.5 19.8 0.6 232 chr3L 2795678 intron CG43444 - chr3L 2795794 intron CG43444 - chr3L 2795910 intron CG43444 - chr3L_12_2795001 chr3L_2795001 RAL-913 1816 chr3L 2835837 2835850 chr3L 2835967 2835980 5 129 14.0 16.0 15.0 0.3 143 chr3L 2835837 intron CG43444 - chr3L 2835908 intron CG43444 - chr3L 2835980 intron CG43444 - chr3L_5_2835001 chr3L_2835001 RAL-913 1817 chr3L 2835851 2835867 chr3L 2835966 2835997 8 124 11.5 15.5 13.5 0.6 146 chr3L 2835851 intron CG43444 - chr3L 2835924 intron CG43444 - chr3L 2835997 intron CG43444 - chr3L_8_2835001 chr3L_2835001 RAL-913 1818 chr3L 2856248 2856299 chr3L 2856384 2856430 6 132 27.5 25.5 26.5 0.2 182 chr3L 2856248 intron CG43444 - chr3L 2856339 intron CG43444 - chr3L 2856430 intron CG43444 - chr3L_6_2855001 chr3L_2855001 RAL-913 1819 chr3L 2889840 2889908 chr3L 2889969 2890037 6 129 27.5 30.5 29.0 0.2 197 chr3L 2889840 intron spz5 - chr3L 2889938 intron spz5 - chr3L 2890037 intron spz5 - chr3L_6_2885001 chr3L_2885001 RAL-913 1820 chr3L 2906018 2906088 chr3L 2906155 2906170 19 134 21.0 18.0 19.5 0.9 152 chr3L 2906018 intron Shab + chr3L 2906094 intron Shab + chr3L 2906170 intron Shab + chr3L_19_2905001 chr3L_2905001 RAL-913 1821 chr3L 2927796 2927866 chr3L 2936123 2936193 Tirant 34 8327 9.0 11.5 10.2 3.0 8397 chr3L 2927796 intron Shab + chr3L 2931994 intron Shab + chr3L 2936193 intron Shab + chr3L_34_2930001 chr3L_2930001 RAL-913 1822 chr3L 2966675 2966725 chr3L 2974152 2974205 mdg1 11 7479 9.5 1.5 5.5 1.7 7530 chr3L 2966675 intergenic not near genes chr3L 2970440 intergenic not near genes chr3L 2974205 intergenic not near genes chr3L_11_2970001 chr3L_2970001 RAL-913 1823 chr3L 2974266 2974338 chr3L 2974394 2974449 14 120 7.5 12.5 10.0 1.3 183 chr3L 2974266 intergenic not near genes chr3L 2974358 intergenic not near genes chr3L 2974449 intergenic not near genes chr3L_14_2970001 chr3L_2970001 RAL-913 1824 chr3L 3028217 3028283 chr3L 3028349 3028417 27 133 18.0 17.0 17.5 1.5 200 chr3L 3028217 intergenic not near genes chr3L 3028317 intergenic not near genes chr3L 3028417 intergenic not near genes chr3L_27_3025001 chr3L_3025001 RAL-913 1825 chr3L 3040281 3040339 chr3L 3042120 3042178 S-element 24 1838 14.0 10.5 12.2 1.8 1897 chr3L 3040281 3` UTR CG2162 + chr3L 3041230 intergenic not near genes chr3L 3042178 intergenic Jafrac2 + chr3L_24_3040001 chr3L_3040001 RAL-913 1826 chr3L 3050866 3050930 chr3L 3051003 3051054 12 136 5.0 13.5 9.2 1.2 188 chr3L 3050866 intron CG32485 + chr3L 3050960 intron CG32485 + chr3L 3051054 exon CG32485 + chr3L_12_3050001 chr3L_3050001 RAL-913 1827 chr3L 3051696 3051754 chr3L 3051988 3052049 pogo 24 292 11.5 8.0 9.8 2.2 353 chr3L 3051696 3` UTR CG32485 + chr3L 3051872 intergenic CG32485 + chr3L 3052049 intergenic CG32485 +,CG1271 + chr3L_24_3050001 chr3L_3050001 RAL-913 1828 chr3L 3058768 3058834 chr3L 3058895 3058966 9 128 26.0 24.0 25.0 0.3 198 chr3L 3058768 intron CG32486 - chr3L 3058867 intron CG32486 - chr3L 3058966 intron CG32486 - chr3L_9_3055001 chr3L_3055001 RAL-913 1829 chr3L 3060041 3060067 chr3L 3060218 3060234 4 174 28.5 19.5 24.0 0.2 193 chr3L 3060041 intron CG32486 - chr3L 3060138 intron CG32486 - chr3L 3060234 intron CG32486 - chr3L_4_3060001 chr3L_3060001 RAL-913 1830 chr3L 3060068 3060108 chr3L 3060210 3060225 8 155 21.0 19.0 20.0 0.4 157 chr3L 3060068 intron CG32486 - chr3L 3060146 intron CG32486 - chr3L 3060225 intron CG32486 - chr3L_8_3060001 chr3L_3060001 RAL-913 1831 chr3L 3061252 3061315 chr3L 3069867 3069938 Tirant 17 8614 6.5 6.0 6.2 2.4 8686 chr3L 3061252 intron CG32486 - chr3L 3065595 intron CG32486 - chr3L 3069938 intron CG32486 - chr3L_17_3065001 chr3L_3065001 RAL-913 1832 chr3L 3074753 3074817 chr3L 3074880 3074888 23 113 13.0 16.5 14.8 1.5 135 chr3L 3074753 intron CG11486 + chr3L 3074820 intron CG11486 + chr3L 3074888 intron CG11486 + chr3L_23_3070001 chr3L_3070001 RAL-913 1833 chr3L 3102776 3102845 chr3L 3102912 3102945 11 132 22.5 24.0 23.2 0.5 169 chr3L 3102776 intron Cht7 - chr3L 3102860 intron Cht7 - chr3L 3102945 intron Cht7 - chr3L_11_3100001 chr3L_3100001 RAL-913 1834 chr3L 3103434 3103466 chr3L 3103561 3103593 10 127 14.5 9.0 11.8 0.8 159 chr3L 3103434 intron Cht7 - chr3L 3103514 intron Cht7 - chr3L 3103593 intron Cht7 - chr3L_10_3100001 chr3L_3100001 RAL-913 1835 chr3L 3103698 3103716 chr3L 3104005 3104029 6 311 17.5 18.5 18.0 0.3 331 chr3L 3103698 intron Cht7 - chr3L 3103864 intron Cht7 - chr3L 3104029 intron Cht7 - chr3L_6_3100001 chr3L_3100001 RAL-913 1836 chr3L 3125731 3125795 chr3L 3125862 3125926 15 128 30.5 31.5 31.0 0.5 195 chr3L 3125731 intron prominin-like - chr3L 3125828 intron prominin-like - chr3L 3125926 intron prominin-like - chr3L_15_3125001 chr3L_3125001 RAL-913 1837 chr3L 3128141 3128213 chr3L 3128277 3128349 17 134 21.5 18.0 19.8 0.8 208 chr3L 3128141 intergenic prominin-like - chr3L 3128245 intergenic not near genes chr3L 3128349 intergenic CG11537 - chr3L_17_3125001 chr3L_3125001 RAL-913 1838 chr3L 3165327 3165377 chr3L 3165435 3165510 13 131 24.5 27.0 25.8 0.5 183 chr3L 3165327 intron,intron Asciz -,CG32280 + chr3L 3165418 intron,intron Asciz -,CG32280 + chr3L 3165510 intron,intron Asciz -,CG32280 + chr3L_13_3165001 chr3L_3165001 RAL-913 1839 chr3L 3246846 3246895 chr3L 3246983 3247034 4 137 21.5 27.5 24.5 0.2 188 chr3L 3246846 intergenic not near genes chr3L 3246940 intergenic not near genes chr3L 3247034 intergenic not near genes chr3L_4_3245001 chr3L_3245001 RAL-913 1840 chr3L 3247577 3247609 chr3L 3247709 3247741 5 132 30.0 37.0 33.5 0.1 164 chr3L 3247577 intergenic CG43389 + chr3L 3247659 intergenic CG43389 + chr3L 3247741 intergenic CG43389 + chr3L_5_3245001 chr3L_3245001 RAL-913 1841 chr3L 3252291 3252374 chr3L 3252417 3252500 22 126 8.5 10.5 9.5 2.1 209 chr3L 3252291 5` UTR CR43626 + chr3L 3252396 5` UTR CR43626 + chr3L 3252500 5` UTR CR43626 + chr3L_22_3250001 chr3L_3250001 RAL-913 1842 chr3L 3259772 3259833 chr3L 3259922 3259983 7 150 35.0 36.0 35.5 0.2 211 chr3L 3259772 intron ckd + chr3L 3259878 intron ckd + chr3L 3259983 intron ckd + chr3L_7_3255001 chr3L_3255001 RAL-913 1843 chr3L 3263741 3263816 chr3L 3263868 3263945 10 128 28.0 29.5 28.8 0.3 204 chr3L 3263741 intron ckd + chr3L 3263843 intron ckd + chr3L 3263945 intron ckd + chr3L_10_3260001 chr3L_3260001 RAL-913 1844 chr3L 3269062 3269128 chr3L 3269193 3269269 14 140 0.5 10.0 5.2 2.3 207 chr3L 3269062 intergenic CG34265 + chr3L 3269166 intergenic CG34265 + chr3L 3269269 intergenic CG34265 + chr3L_14_3265001 chr3L_3265001 RAL-913 1845 chr3L 3281405 3281414 chr3L 3281951 3281960 Doc 6 545 22.0 9.0 15.5 0.4 555 chr3L 3281405 intron CG12017 + chr3L 3281682 intron CG12017 + chr3L 3281960 intron CG12017 + chr3L_6_3280001 chr3L_3280001 RAL-913 1846 chr3L 3281415 3281454 chr3L 3281945 3281993 Doc 12 538 14.5 8.0 11.2 1.0 578 chr3L 3281415 intron CG12017 + chr3L 3281704 intron CG12017 + chr3L 3281993 intron CG12017 + chr3L_12_3280001 chr3L_3280001 RAL-913 1847 chr3L 3294085 3294137 chr3L 3294226 3294278 9 141 18.0 16.5 17.2 0.5 193 chr3L 3294085 intron CG12009 + chr3L 3294182 intron CG12009 + chr3L 3294278 intron CG12009 + chr3L_9_3290001 chr3L_3290001 RAL-913 1848 chr3L 3317506 3317562 chr3L 3317634 3317691 24 129 2.5 16.0 9.2 2.4 185 chr3L 3317506 intergenic Drsl5 + chr3L 3317598 intergenic PIG-C -,Drsl5 + chr3L 3317691 intergenic PIG-C - chr3L_24_3315001 chr3L_3315001 RAL-913 1849 chr3L 3392950 3393027 chr3L 3393083 3393139 6 127 26.0 25.5 25.8 0.2 189 chr3L 3392950 intergenic not near genes chr3L 3393044 intergenic not near genes chr3L 3393139 intergenic not near genes chr3L_6_3390001 chr3L_3390001 RAL-913 1850 chr3L 3408910 3408938 chr3L 3409026 3409050 6 117 21.0 17.5 19.2 0.3 140 chr3L 3408910 intron sty - chr3L 3408980 intron sty - chr3L 3409050 intron sty - chr3L_6_3405001 chr3L_3405001 RAL-913 1851 chr3L 3436244 3436314 chr3L 3436373 3436443 14 129 30.5 27.5 29.0 0.5 199 chr3L 3436244 intron eIF5B - chr3L 3436344 intron eIF5B - chr3L 3436443 intron eIF5B - chr3L_14_3435001 chr3L_3435001 RAL-913 1852 chr3L 3439162 3439192 chr3L 3439288 3439318 8 125 18.5 22.0 20.2 0.4 156 chr3L 3439162 intron eIF5B - chr3L 3439240 intron eIF5B - chr3L 3439318 intron eIF5B - chr3L_8_3435001 chr3L_3435001 RAL-913 1853 chr3L 3449216 3449234 chr3L 3449344 3449362 11 128 6.5 3.0 4.8 1.9 146 chr3L 3449216 intron eIF5B - chr3L 3449289 intron eIF5B - chr3L 3449362 intron eIF5B - chr3L_11_3445001 chr3L_3445001 RAL-913 1854 chr3L 3470125 3470131 chr3L 3470251 3470257 9 126 12.5 15.5 14.0 0.6 132 chr3L 3470125 intron CG14971 - chr3L 3470191 intron CG14971 - chr3L 3470257 intron CG14971 - chr3L_9_3470001 chr3L_3470001 RAL-913 1855 chr3L 3470138 3470183 chr3L 3470249 3470309 22 124 4.5 15.5 10.0 2.0 171 chr3L 3470138 intron CG14971 - chr3L 3470224 intron CG14971 - chr3L 3470309 intron CG14971 - chr3L_22_3470001 chr3L_3470001 RAL-913 1856 chr3L 3475027 3475073 chr3L 3475521 3475556 jockey 6 488 12.0 8.0 10.0 0.5 529 chr3L 3475027 intron CG42324 + chr3L 3475292 intron CG42324 + chr3L 3475556 intron CG42324 + chr3L_6_3475001 chr3L_3475001 RAL-913 1857 chr3L 3491261 3491292 chr3L 3491396 3491412 5 128 32.5 24.0 28.2 0.2 151 chr3L 3491261 intron CG42324 + chr3L 3491336 intron CG42324 + chr3L 3491412 intron CG42324 + chr3L_5_3490001 chr3L_3490001 RAL-913 1858 chr3L 3494751 3494772 chr3L 3494879 3494898 5 128 23.5 26.5 25.0 0.2 147 chr3L 3494751 intron CG42324 + chr3L 3494824 intron CG42324 + chr3L 3494898 intron CG42324 + chr3L_5_3490001 chr3L_3490001 RAL-913 1859 chr3L 3512320 3512346 chr3L 3512450 3512466 5 127 10.0 14.5 12.2 0.4 146 chr3L 3512320 exon ImpE2 - chr3L 3512393 exon ImpE2 - chr3L 3512466 exon ImpE2 - chr3L_5_3510001 chr3L_3510001 RAL-913 1860 chr3L 3517956 3518012 chr3L 3518088 3518144 7 132 18.5 14.0 16.2 0.4 188 chr3L 3517956 intron Eip63E + chr3L 3518050 intron Eip63E + chr3L 3518144 intron Eip63E + chr3L_7_3515001 chr3L_3515001 RAL-913 1861 chr3L 3530653 3530726 chr3L 3530781 3530854 12 128 2.0 3.5 2.8 3.2 201 chr3L 3530653 intron Eip63E + chr3L 3530754 intron Eip63E + chr3L 3530854 intron Eip63E + chr3L_12_3530001 chr3L_3530001 RAL-913 1862 chr3L 3548683 3548709 chr3L 3548855 3548881 4 172 21.5 19.5 20.5 0.2 198 chr3L 3548683 intron Eip63E + chr3L 3548782 intron Eip63E + chr3L 3548881 intron Eip63E + chr3L_4_3545001 chr3L_3545001 RAL-913 1863 chr3L 3581705 3581766 chr3L 3581838 3581901 11 133 14.0 9.0 11.5 0.9 196 chr3L 3581705 intron Eip63E + chr3L 3581803 intron Eip63E + chr3L 3581901 intron Eip63E + chr3L_11_3580001 chr3L_3580001 RAL-913 1864 chr3L 3601260 3601269 chr3L 3606621 3606630 copia 8 5361 22.0 12.0 17.0 0.4 5370 chr3L 3601260 intron Eip63E + chr3L 3603945 intron Eip63E + chr3L 3606630 intron Eip63E + chr3L_8_3600001 chr3L_3600001 RAL-913 1865 chr3L 3601274 3601286 chr3L 3606618 3606647 copia 9 5359 18.0 11.0 14.5 0.6 5373 chr3L 3601274 intron Eip63E + chr3L 3603960 intron Eip63E + chr3L 3606647 intron Eip63E + chr3L_9_3600001 chr3L_3600001 RAL-913 1866 chr3L 3601289 3601331 chr3L 3606607 3606661 copia 15 5351 7.5 6.5 7.0 1.9 5372 chr3L 3601289 intron Eip63E + chr3L 3603975 intron Eip63E + chr3L 3606661 intron Eip63E + chr3L_15_3600001 chr3L_3600001 RAL-913 1867 chr3L 3627192 3627259 chr3L 3627347 3627414 8 155 31.0 34.5 32.8 0.2 222 chr3L 3627192 intron dar1 + chr3L 3627303 intron dar1 + chr3L 3627414 intron dar1 + chr3L_8_3625001 chr3L_3625001 RAL-913 1868 chr3L 3691257 3691262 chr3L 3691405 3691410 4 148 28.5 27.5 28.0 0.1 153 chr3L 3691257 intergenic not near genes chr3L 3691334 intergenic not near genes chr3L 3691410 intergenic not near genes chr3L_4_3690001 chr3L_3690001 RAL-913 1869 chr3L 3763707 3763721 chr3L 3763838 3763852 6 131 11.5 0.0 5.8 0.9 145 chr3L 3763707 intron CG32264 - chr3L 3763780 intron CG32264 - chr3L 3763852 intron CG32264 - chr3L_6_3760001 chr3L_3760001 RAL-913 1870 chr3L 3766687 3766758 chr3L 3766823 3766894 6 136 6.5 4.0 5.2 1.0 207 chr3L 3766687 intron CG32264 - chr3L 3766790 intron CG32264 - chr3L 3766894 intron CG32264 - chr3L_6_3765001 chr3L_3765001 RAL-913 1871 chr3L 3768915 3768981 chr3L 3769065 3769131 21 150 11.0 10.0 10.5 1.8 216 chr3L 3768915 intron CG32264 - chr3L 3769023 intron CG32264 - chr3L 3769131 exon CG32264 - chr3L_21_3765001 chr3L_3765001 RAL-913 1872 chr3L 3783225 3783290 chr3L 3783352 3783417 31 126 10.5 8.5 9.5 3.0 192 chr3L 3783225 intron CG32264 - chr3L 3783321 intron CG32264 - chr3L 3783417 intron CG32264 - chr3L_31_3780001 chr3L_3780001 RAL-913 1873 chr3L 3795549 3795605 chr3L 3795676 3795732 15 125 12.0 14.5 13.2 1.1 183 chr3L 3795549 intron CG32264 - chr3L 3795640 intron CG32264 - chr3L 3795732 intron CG32264 - chr3L_15_3795001 chr3L_3795001 RAL-913 1874 chr3L 3797194 3797265 chr3L 3797327 3797398 21 133 3.0 12.0 7.5 2.5 204 chr3L 3797194 intron CG32264 - chr3L 3797296 intron CG32264 - chr3L 3797398 intron CG32264 - chr3L_21_3795001 chr3L_3795001 RAL-913 1875 chr3L 3815008 3815077 chr3L 3815134 3815208 9 130 17.0 17.0 17.0 0.5 200 chr3L 3815008 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815108 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815208 intron,3` UTR Scsalpha +,CR43932 - chr3L_9_3815001 chr3L_3815001 RAL-913 1876 chr3L 3833692 3833769 chr3L 3833983 3834060 pogo 20 288 7.0 9.0 8.0 2.2 368 chr3L 3833692 intron enc + chr3L 3833876 intron enc + chr3L 3834060 intron enc + chr3L_20_3830001 chr3L_3830001 RAL-913 1877 chr3L 3864807 3864848 chr3L 3864940 3864981 6 133 11.0 24.0 17.5 0.3 174 chr3L 3864807 intergenic CR45379 - chr3L 3864894 intergenic CR45379 - chr3L 3864981 intergenic not near genes chr3L_6_3860001 chr3L_3860001 RAL-913 1878 chr3L 3877428 3877467 chr3L 3877601 3877640 6 172 4.5 9.5 7.0 0.8 212 chr3L 3877428 intergenic not near genes chr3L 3877534 intergenic not near genes chr3L 3877640 intergenic not near genes chr3L_6_3875001 chr3L_3875001 RAL-913 1879 chr3L 3889090 3889131 chr3L 3889223 3889264 11 133 24.5 25.5 25.0 0.4 174 chr3L 3889090 intergenic not near genes chr3L 3889177 intergenic not near genes chr3L 3889264 intergenic not near genes chr3L_11_3885001 chr3L_3885001 RAL-913 1880 chr3L 3890915 3890954 chr3L 3891046 3891085 13 131 21.0 12.5 16.8 0.7 170 chr3L 3890915 intergenic not near genes chr3L 3891000 intergenic not near genes chr3L 3891085 intergenic not near genes chr3L_13_3890001 chr3L_3890001 RAL-913 1881 chr3L 3914981 3915049 chr3L 3915108 3915176 17 127 15.5 17.5 16.5 1.0 195 chr3L 3914981 intron Eip63F-1 - chr3L 3915078 intron Eip63F-1 - chr3L 3915176 intron Eip63F-1 - chr3L_17_3915001 chr3L_3915001 RAL-913 1882 chr3L 3921342 3921418 chr3L 3921656 3921715 12 309 17.5 20.5 19.0 0.6 373 chr3L 3921342 intron Eip63F-1 - chr3L 3921528 intron Eip63F-1 - chr3L 3921715 intron Eip63F-1 - chr3L_12_3920001 chr3L_3920001 RAL-913 1883 chr3L 3956537 3956567 chr3L 3956665 3956695 8 128 24.5 26.5 25.5 0.3 158 chr3L 3956537 3` UTR CG12605 - chr3L 3956616 3` UTR CG12605 - chr3L 3956695 3` UTR CG12605 - chr3L_8_3955001 chr3L_3955001 RAL-913 1884 chr3L 3994955 3995029 chr3L 3995099 3995168 8 141 29.5 30.0 29.8 0.3 213 chr3L 3994955 intergenic not near genes chr3L 3995062 intergenic not near genes chr3L 3995168 intergenic not near genes chr3L_8_3995001 chr3L_3995001 RAL-913 1885 chr3L 4022656 4022710 chr3L 4022806 4022860 8 150 32.5 31.5 32.0 0.2 204 chr3L 4022656 intron Mul1 + chr3L 4022758 intron Mul1 + chr3L 4022860 exon Mul1 + chr3L_8_4020001 chr3L_4020001 RAL-913 1886 chr3L 4054243 4054312 chr3L 4054383 4054452 14 140 17.0 13.5 15.2 0.9 209 chr3L 4054243 intron CG1136 + chr3L 4054348 intron CG1136 + chr3L 4054452 intron CG1136 + chr3L_14_4050001 chr3L_4050001 RAL-913 1887 chr3L 4058795 4058874 chr3L 4058925 4059004 6 130 15.5 15.5 15.5 0.4 209 chr3L 4058795 3` UTR CG1136 + chr3L 4058900 3` UTR CG1136 + chr3L 4059004 3` UTR CG1136 + chr3L_6_4055001 chr3L_4055001 RAL-913 1888 chr3L 4099434 4099490 chr3L 4099565 4099611 14 130 35.5 32.0 33.8 0.4 177 chr3L 4099434 intron CG14995 - chr3L 4099522 intron CG14995 - chr3L 4099611 intron CG14995 - chr3L_14_4095001 chr3L_4095001 RAL-913 1889 chr3L 4146772 4146837 chr3L 4146899 4146939 19 130 2.5 12.0 7.2 2.3 167 chr3L 4146772 intergenic not near genes chr3L 4146856 intergenic not near genes chr3L 4146939 intergenic not near genes chr3L_19_4145001 chr3L_4145001 RAL-913 1890 chr3L 4154213 4154227 chr3L 4154344 4154358 5 131 11.5 21.0 16.2 0.3 145 chr3L 4154213 exon nab - chr3L 4154286 intron nab - chr3L 4154358 intron nab - chr3L_5_4150001 chr3L_4150001 RAL-913 1891 chr3L 4170105 4170165 chr3L 4170232 4170293 15 127 21.5 20.5 21.0 0.7 188 chr3L 4170105 intergenic Ero1L + chr3L 4170199 intergenic Ero1L + chr3L 4170293 intergenic Ero1L + chr3L_15_4170001 chr3L_4170001 RAL-913 1892 chr3L 4214491 4214542 chr3L 4214683 4214734 10 192 17.5 20.0 18.8 0.5 243 chr3L 4214491 intron CG43367 + chr3L 4214612 intron CG43367 + chr3L 4214734 intron CG43367 + chr3L_10_4210001 chr3L_4210001 RAL-913 1893 chr3L 4229723 4229749 chr3L 4229855 4229894 8 135 25.0 24.5 24.8 0.3 171 chr3L 4229723 intron ImpL2 - chr3L 4229808 intron ImpL2 - chr3L 4229894 intron ImpL2 - chr3L_8_4225001 chr3L_4225001 RAL-913 1894 chr3L 4328692 4328757 chr3L 4336239 4336305 412 18 7545 4.5 10.0 7.2 2.2 7613 chr3L 4328692 intron Cip4 - chr3L 4332498 intron Cip4 - chr3L 4336305 exon Cip4 - chr3L_18_4330001 chr3L_4330001 RAL-913 1895 chr3L 4341330 4341335 chr3L 21448026 21448026 5 17106694 37.0 35.0 36.0 0.1 17106696 chr3L 4341330 intron Cip4 - chr3L 12894678 3` UTR CG14118 + chr3L 21448026 3` UTR Syx7 + chr3L_5_12890001 chr3L_12890001 RAL-913 1896 chr3L 4344841 4344911 chr3L 4344998 4345053 9 149 21.0 17.0 19.0 0.5 212 chr3L 4344841 intron Cip4 - chr3L 4344947 intron Cip4 - chr3L 4345053 intron Cip4 - chr3L_9_4340001 chr3L_4340001 RAL-913 1897 chr3L 4361015 4361023 chr3L 4362921 4362929 6 1906 1.0 14.5 7.8 0.7 1914 chr3L 4361015 intron Cip4 - chr3L 4361972 intron Cip4 - chr3L 4362929 intron Cip4 - chr3L_6_4360001 chr3L_4360001 RAL-913 1898 chr3L 4364147 4364226 chr3L 4364286 4364365 21 139 6.0 6.0 6.0 3.0 218 chr3L 4364147 intergenic Cip4 -,mRpS6 + chr3L 4364256 intergenic Cip4 -,mRpS6 + chr3L 4364365 intergenic mRpS6 +,Cip4 - chr3L_21_4360001 chr3L_4360001 RAL-913 1899 chr3L 4438698 4438744 chr3L 4438828 4438874 9 126 17.0 14.0 15.5 0.5 176 chr3L 4438698 intergenic CG15021 + chr3L 4438786 intergenic CG15021 + chr3L 4438874 intergenic not near genes chr3L_9_4435001 chr3L_4435001 RAL-913 1900 chr3L 4440707 4440754 chr3L 4440835 4440885 12 130 19.5 7.5 13.5 0.8 178 chr3L 4440707 intergenic not near genes chr3L 4440796 intergenic not near genes chr3L 4440885 intergenic not near genes chr3L_12_4440001 chr3L_4440001 RAL-913 1901 chr3L 4516835 4516861 chr3L 4516962 4516988 17 127 10.5 29.0 19.8 0.8 153 chr3L 4516835 intron Tie - chr3L 4516912 intron Tie - chr3L 4516988 intron Tie - chr3L_17_4515001 chr3L_4515001 RAL-913 1902 chr3L 4560964 4561030 chr3L 4561093 4561158 10 126 28.5 28.0 28.2 0.3 194 chr3L 4560964 intron CG42540 + chr3L 4561061 intron CG42540 + chr3L 4561158 intron CG42540 + chr3L_10_4560001 chr3L_4560001 RAL-913 1903 chr3L 4624313 4624358 chr3L 4624445 4624490 14 130 20.5 19.0 19.8 0.7 177 chr3L 4624313 intron Src64B - chr3L 4624402 intron Src64B - chr3L 4624490 intron Src64B - chr3L_14_4620001 chr3L_4620001 RAL-913 1904 chr3L 4631596 4631669 chr3L 4631716 4631795 18 125 14.5 18.5 16.5 1.0 199 chr3L 4631596 intron axo - chr3L 4631696 intron axo - chr3L 4631795 intron axo - chr3L_18_4630001 chr3L_4630001 RAL-913 1905 chr3L 4631961 4632028 chr3L 4632799 4632866 13 829 12.0 8.0 10.0 1.2 905 chr3L 4631961 intron axo - chr3L 4632414 intron axo - chr3L 4632866 intron axo - chr3L_13_4630001 chr3L_4630001 RAL-913 1906 chr3L 4657923 4658000 chr3L 4658430 4658512 26 508 11.5 18.0 14.8 1.6 589 chr3L 4657923 intron axo - chr3L 4658218 intron axo - chr3L 4658512 intron axo - chr3L_26_4655001 chr3L_4655001 RAL-913 1907 chr3L 4675987 4676019 chr3L 4676118 4676150 9 131 25.5 27.0 26.2 0.3 163 chr3L 4675987 intron axo - chr3L 4676068 intron axo - chr3L 4676150 intron axo - chr3L_9_4675001 chr3L_4675001 RAL-913 1908 chr3L 4677840 4677876 chr3L 4678047 4678089 10 207 15.5 20.5 18.0 0.5 249 chr3L 4677840 intron,5` UTR axo -,CG34266 + chr3L 4677964 intron,exon axo -,CG34266 + chr3L 4678089 intron,exon axo -,CG34266 + chr3L_10_4675001 chr3L_4675001 RAL-913 1909 chr3L 4699249 4699316 chr3L 4699374 4699446 10 130 20.5 22.0 21.2 0.5 197 chr3L 4699249 intron RhoGEF64C + chr3L 4699348 intron RhoGEF64C + chr3L 4699446 intron RhoGEF64C + chr3L_10_4695001 chr3L_4695001 RAL-913 1910 chr3L 4700753 4700770 chr3L 4700897 4700914 6 144 27.5 20.0 23.8 0.2 161 chr3L 4700753 intron RhoGEF64C + chr3L 4700834 intron RhoGEF64C + chr3L 4700914 intron RhoGEF64C + chr3L_6_4700001 chr3L_4700001 RAL-913 1911 chr3L 4726393 4726459 chr3L 4726524 4726535 14 126 17.5 19.5 18.5 0.7 142 chr3L 4726393 intron RhoGEF64C + chr3L 4726464 intron RhoGEF64C + chr3L 4726535 intron RhoGEF64C + chr3L_14_4725001 chr3L_4725001 RAL-913 1912 chr3L 4782056 4782127 chr3L 4782206 4782240 19 146 15.5 16.5 16.0 1.1 184 chr3L 4782056 intron RhoGEF64C + chr3L 4782148 intron RhoGEF64C + chr3L 4782240 intron RhoGEF64C + chr3L_19_4780001 chr3L_4780001 RAL-913 1913 chr3L 4784921 4784989 chr3L 4785169 4785248 15 256 11.0 15.5 13.2 1.1 327 chr3L 4784921 intron RhoGEF64C + chr3L 4785084 intron RhoGEF64C + chr3L 4785248 intron RhoGEF64C + chr3L_15_4785001 chr3L_4785001 RAL-913 1914 chr3L 4797933 4797991 chr3L 4798063 4798121 8 128 16.5 21.5 19.0 0.4 188 chr3L 4797933 intergenic not near genes chr3L 4798027 intergenic not near genes chr3L 4798121 intergenic not near genes chr3L_8_4795001 chr3L_4795001 RAL-913 1915 chr3L 4837846 4837914 chr3L 4837975 4838043 15 129 37.0 37.5 37.2 0.4 197 chr3L 4837846 3` UTR CG13707 - chr3L 4837944 3` UTR CG13707 - chr3L 4838043 3` UTR CG13707 - chr3L_15_4835001 chr3L_4835001 RAL-913 1916 chr3L 4840361 4840382 chr3L 4840500 4840541 6 155 10.5 5.0 7.8 0.7 180 chr3L 4840361 intergenic CG13707 - chr3L 4840451 intergenic CG13707 - chr3L 4840541 intergenic CG13707 - chr3L_6_4840001 chr3L_4840001 RAL-913 1917 chr3L 4858265 4858331 chr3L 4858400 4858451 29 136 5.0 6.0 5.5 4.5 186 chr3L 4858265 intergenic not near genes chr3L 4858358 intergenic not near genes chr3L 4858451 intergenic not near genes chr3L_29_4855001 chr3L_4855001 RAL-913 1918 chr3L 4901085 4901151 chr3L 4907325 4907391 diver 15 6239 13.0 7.5 10.2 1.3 6306 chr3L 4901085 intergenic CG13704 + chr3L 4904238 intergenic not near genes chr3L 4907391 intergenic not near genes chr3L_15_4900001 chr3L_4900001 RAL-913 1919 chr3L 4958369 4958442 chr3L 4958507 4958580 18 136 18.5 23.5 21.0 0.8 211 chr3L 4958369 intron Con - chr3L 4958474 intron Con - chr3L 4958580 intron Con - chr3L_18_4955001 chr3L_4955001 RAL-913 1920 chr3L 4967082 4967128 chr3L 4967244 4967290 13 160 20.5 16.0 18.2 0.7 208 chr3L 4967082 intron Con - chr3L 4967186 intron Con - chr3L 4967290 intron Con - chr3L_13_4965001 chr3L_4965001 RAL-913 1921 chr3L 4991355 4991416 chr3L 4991529 4991590 10 174 25.5 22.0 23.8 0.4 235 chr3L 4991355 intron Con - chr3L 4991472 intron Con - chr3L 4991590 intron Con - chr3L_10_4990001 chr3L_4990001 RAL-913 1922 chr3L 5034117 5034180 chr3L 5043319 5043380 roo 27 9201 9.5 8.0 8.8 2.8 9263 chr3L 5034117 intron Con - chr3L 5038748 intron Con - chr3L 5043380 intron Con - chr3L_27_5035001 chr3L_5035001 RAL-913 1923 chr3L 5045414 5045476 chr3L 5050245 5050307 Doc 24 4830 16.0 12.0 14.0 1.6 4893 chr3L 5045414 5` UTR Con - chr3L 5047860 intron Con - chr3L 5050307 intron Con - chr3L_24_5045001 chr3L_5045001 RAL-913 1924 chr3L 5080938 5080944 chr3L 5081068 5081074 4 130 3.5 0.0 1.8 1.4 136 chr3L 5080938 intergenic not near genes chr3L 5081006 intergenic not near genes chr3L 5081074 intergenic not near genes chr3L_4_5080001 chr3L_5080001 RAL-913 1925 chr3L 5103571 5103583 chr3L 5103701 5103713 6 130 27.0 14.5 20.8 0.3 142 chr3L 5103571 intergenic not near genes chr3L 5103642 intergenic not near genes chr3L 5103713 intergenic not near genes chr3L_6_5100001 chr3L_5100001 RAL-913 1926 chr3L 5104433 5104505 chr3L 5124617 5124689 30 20182 7.5 9.5 8.5 3.2 20256 chr3L 5104433 intergenic not near genes chr3L 5114561 intergenic not near genes chr3L 5124689 intergenic not near genes chr3L_30_5110001 chr3L_5110001 RAL-913 1927 chr3L 5172536 5172590 chr3L 5172673 5172725 24 136 16.0 6.5 11.2 2.0 189 chr3L 5172536 intron shep - chr3L 5172630 intron shep - chr3L 5172725 intron shep - chr3L_24_5170001 chr3L_5170001 RAL-913 1928 chr3L 5180587 5180657 chr3L 5180738 5180797 13 150 11.5 15.0 13.2 0.9 210 chr3L 5180587 intron shep - chr3L 5180692 intron shep - chr3L 5180797 intron shep - chr3L_13_5180001 chr3L_5180001 RAL-913 1929 chr3L 5225015 5225060 chr3L 5225177 5225224 6 162 6.0 0.0 3.0 1.5 209 chr3L 5225015 intron shep - chr3L 5225120 intron shep - chr3L 5225224 intron shep - chr3L_6_5225001 chr3L_5225001 RAL-913 1930 chr3L 5251812 5251869 chr3L 5251941 5251998 20 129 3.0 11.0 7.0 2.5 186 chr3L 5251812 intron shep - chr3L 5251905 intron shep - chr3L 5251998 intron shep - chr3L_20_5250001 chr3L_5250001 RAL-913 1931 chr3L 5261118 5261176 chr3L 5261247 5261305 18 126 11.5 15.0 13.2 1.3 187 chr3L 5261118 intron shep - chr3L 5261212 intron shep - chr3L 5261305 intron shep - chr3L_18_5260001 chr3L_5260001 RAL-913 1932 chr3L 5265178 5265245 chr3L 5265420 5265449 12 232 17.5 19.0 18.2 0.6 271 chr3L 5265178 intron shep - chr3L 5265314 intron shep - chr3L 5265449 intron shep - chr3L_12_5265001 chr3L_5265001 RAL-913 1933 chr3L 5271152 5271170 chr3L 5271280 5271298 5 128 0.0 0.0 0.0 5.0 146 chr3L 5271152 intron shep - chr3L 5271225 intron shep - chr3L 5271298 intron shep - chr3L_5_5270001 chr3L_5270001 RAL-913 1934 chr3L 5280100 5280159 chr3L 5280279 5280333 9 188 13.0 16.5 14.8 0.6 233 chr3L 5280100 intergenic not near genes chr3L 5280216 intergenic not near genes chr3L 5280333 intergenic not near genes chr3L_9_5280001 chr3L_5280001 RAL-913 1935 chr3L 5291646 5291695 chr3L 5291773 5291799 11 121 8.0 14.5 11.2 0.9 153 chr3L 5291646 intergenic not near genes chr3L 5291722 intergenic not near genes chr3L 5291799 intergenic not near genes chr3L_11_5290001 chr3L_5290001 RAL-913 1936 chr3L 5299118 5299180 chr3L 5306604 5306614 Quasimodo 13 7482 7.0 4.0 5.5 2.0 7496 chr3L 5299118 intergenic not near genes chr3L 5302866 intergenic not near genes chr3L 5306614 intergenic not near genes chr3L_13_5300001 chr3L_5300001 RAL-913 1937 chr3L 5351058 5351129 chr3L 5351193 5351264 28 134 23.0 19.5 21.2 1.3 206 chr3L 5351058 intron lama - chr3L 5351161 intron lama - chr3L 5351264 intron lama - chr3L_28_5350001 chr3L_5350001 RAL-913 1938 chr3L 5381801 5381855 chr3L 5381911 5381985 10 112 18.5 18.0 18.2 0.5 184 chr3L 5381801 exon Ir64a - chr3L 5381893 exon Ir64a - chr3L 5381985 exon Ir64a - chr3L_10_5380001 chr3L_5380001 RAL-913 1939 chr3L 5388158 5388228 chr3L 5388532 5388602 19 374 11.5 11.5 11.5 1.5 444 chr3L 5388158 intergenic not near genes chr3L 5388380 intergenic not near genes chr3L 5388602 intergenic not near genes chr3L_19_5385001 chr3L_5385001 RAL-913 1940 chr3L 5396424 5396444 chr3L 5396560 5396580 8 136 29.0 24.5 26.8 0.3 156 chr3L 5396424 intergenic not near genes chr3L 5396502 intergenic not near genes chr3L 5396580 intergenic not near genes chr3L_8_5395001 chr3L_5395001 RAL-913 1941 chr3L 5449494 5449557 chr3L 5449613 5449686 30 128 6.5 4.5 5.5 4.6 192 chr3L 5449494 intergenic not near genes chr3L 5449590 intergenic not near genes chr3L 5449686 intergenic not near genes chr3L_30_5445001 chr3L_5445001 RAL-913 1942 chr3L 5458057 5458082 chr3L 5466702 5466714 Max-element 6 8644 5.0 13.5 9.2 0.6 8657 chr3L 5458057 intergenic not near genes chr3L 5462386 intergenic not near genes chr3L 5466714 intergenic not near genes chr3L_6_5460001 chr3L_5460001 RAL-913 1943 chr3L 5469412 5469471 chr3L 5470251 5470321 11 849 19.5 15.5 17.5 0.6 909 chr3L 5469412 intergenic not near genes chr3L 5469866 intergenic not near genes chr3L 5470321 intergenic not near genes chr3L_11_5465001 chr3L_5465001 RAL-913 1944 chr3L 5482940 5483069 chr3L 5483183 5483238 8 230 0.0 15.5 7.8 0.9 298 chr3L 5482940 exon CG4835 + chr3L 5483089 exon CG4835 + chr3L 5483238 exon CG4835 + chr3L_8_5480001 chr3L_5480001 RAL-913 1945 chr3L 5498343 5498426 chr3L 5498476 5498528 24 128 2.0 6.0 4.0 4.8 185 chr3L 5498343 exon blanks - chr3L 5498436 exon blanks - chr3L 5498528 exon blanks - chr3L_24_5495001 chr3L_5495001 RAL-913 1946 chr3L 5516365 5516440 chr3L 5516510 5516571 15 142 19.0 18.0 18.5 0.8 206 chr3L 5516365 intron Lkr - chr3L 5516468 intron Lkr - chr3L 5516571 intron Lkr - chr3L_15_5515001 chr3L_5515001 RAL-913 1947 chr3L 5537679 5537744 chr3L 5538071 5538136 jockey 24 392 13.0 13.0 13.0 1.7 457 chr3L 5537679 intergenic not near genes chr3L 5537908 intergenic not near genes chr3L 5538136 intergenic CG10625 - chr3L_24_5535001 chr3L_5535001 RAL-913 1948 chr3L 5572133 5572154 chr3L 5572249 5572296 10 134 15.5 14.5 15.0 0.6 163 chr3L 5572133 intron Msr-110 - chr3L 5572214 intron Msr-110 - chr3L 5572296 intron Msr-110 - chr3L_10_5570001 chr3L_5570001 RAL-913 1949 chr3L 5613450 5613500 chr3L 5613627 5613677 29 177 14.5 7.0 10.8 2.5 227 chr3L 5613450 intergenic not near genes chr3L 5613564 intergenic not near genes chr3L 5613677 intergenic not near genes chr3L_29_5610001 chr3L_5610001 RAL-913 1950 chr3L 5666265 5666309 chr3L 5666399 5666443 4 134 22.0 27.5 24.8 0.2 178 chr3L 5666265 intron sif + chr3L 5666354 intron sif + chr3L 5666443 intron sif + chr3L_4_5665001 chr3L_5665001 RAL-913 1951 chr3L 5677148 5677205 chr3L 5677274 5677331 18 126 18.0 23.5 20.8 0.8 183 chr3L 5677148 intron sif + chr3L 5677240 intron sif + chr3L 5677331 intron sif + chr3L_18_5675001 chr3L_5675001 RAL-913 1952 chr3L 5683210 5683272 chr3L 5683348 5683409 14 134 17.0 18.5 17.8 0.7 199 chr3L 5683210 intron sif + chr3L 5683310 intron sif + chr3L 5683409 intron sif + chr3L_14_5680001 chr3L_5680001 RAL-913 1953 chr3L 5788662 5788727 chr3L 5788793 5788857 17 130 24.5 28.0 26.2 0.6 195 chr3L 5788662 intergenic not near genes chr3L 5788760 intergenic not near genes chr3L 5788857 intergenic not near genes chr3L_17_5785001 chr3L_5785001 RAL-913 1954 chr3L 5908060 5908106 chr3L 5908190 5908236 9 130 17.0 33.0 25.0 0.3 176 chr3L 5908060 intron CG13288 + chr3L 5908148 intron CG13288 + chr3L 5908236 intron CG13288 + chr3L_9_5905001 chr3L_5905001 RAL-913 1955 chr3L 5909983 5910064 chr3L 5910274 5910355 pogo 29 291 8.5 4.5 6.5 3.9 372 chr3L 5909983 intron CG13288 + chr3L 5910169 intron CG13288 + chr3L 5910355 intron CG13288 + chr3L_29_5910001 chr3L_5910001 RAL-913 1956 chr3L 5926281 5926344 chr3L 5926510 5926581 BS 25 234 8.0 9.5 8.8 2.6 300 chr3L 5926281 intron Vap-33B + chr3L 5926431 intron Vap-33B + chr3L 5926581 intron Vap-33B + chr3L_25_5925001 chr3L_5925001 RAL-913 1957 chr3L 5980540 5980615 chr3L 5980677 5980740 26 134 22.5 22.5 22.5 1.1 200 chr3L 5980540 intergenic not near genes chr3L 5980640 intergenic not near genes chr3L 5980740 intergenic not near genes chr3L_26_5980001 chr3L_5980001 RAL-913 1958 chr3L 5983787 5983855 chr3L 5983958 5984026 9 171 30.5 24.5 27.5 0.3 239 chr3L 5983787 3` UTR CR45439 - chr3L 5983906 intergenic CR45439 -,CR45440 - chr3L 5984026 intergenic CR45440 -,CR45439 - chr3L_9_5980001 chr3L_5980001 RAL-913 1959 chr3L 5986994 5987048 chr3L 5987125 5987179 10 131 10.0 12.5 11.2 0.8 185 chr3L 5986994 intergenic not near genes chr3L 5987086 intergenic not near genes chr3L 5987179 intergenic not near genes chr3L_10_5985001 chr3L_5985001 RAL-913 1960 chr3L 5992574 5992587 chr3L 5992714 5992729 7 149 15.5 13.0 14.2 0.5 155 chr3L 5992574 intergenic not near genes chr3L 5992652 intergenic not near genes chr3L 5992729 intergenic not near genes chr3L_7_5990001 chr3L_5990001 RAL-913 1961 chr3L 5992588 5992621 chr3L 5992695 5992773 12 148 6.0 9.0 7.5 1.4 185 chr3L 5992588 intergenic not near genes chr3L 5992680 intergenic not near genes chr3L 5992773 intergenic not near genes chr3L_12_5990001 chr3L_5990001 RAL-913 1962 chr3L 6001638 6001717 chr3L 6004386 6004467 jockey 22 2750 6.5 3.5 5.0 3.7 2829 chr3L 6001638 intron PVRAP + chr3L 6003052 intron PVRAP + chr3L 6004467 intron PVRAP + chr3L_22_6000001 chr3L_6000001 RAL-913 1963 chr3L 6028337 6028396 chr3L 6028485 6028543 14 145 27.5 15.0 21.2 0.6 206 chr3L 6028337 intergenic not near genes chr3L 6028440 intergenic not near genes chr3L 6028543 intergenic not near genes chr3L_14_6025001 chr3L_6025001 RAL-913 1964 chr3L 6033177 6033237 chr3L 6033668 6033729 12 492 30.0 22.0 26.0 0.4 552 chr3L 6033177 intergenic CG10477 - chr3L 6033453 3` UTR CG10477 - chr3L 6033729 3` UTR CG10477 - chr3L_12_6030001 chr3L_6030001 RAL-913 1965 chr3L 6040317 6040380 chr3L 6042723 6042786 Doc 26 2404 8.5 10.0 9.2 2.5 2469 chr3L 6040317 intergenic Jon65Aiv + chr3L 6041552 intergenic not near genes chr3L 6042786 intergenic not near genes chr3L_26_6040001 chr3L_6040001 RAL-913 1966 chr3L 6052125 6052145 chr3L 6052261 6052281 4 136 29.5 33.0 31.2 0.1 156 chr3L 6052125 intergenic Jon65Aii +,Jon65Aiii + chr3L 6052203 intergenic Jon65Aii + chr3L 6052281 intergenic Jon65Aii + chr3L_4_6050001 chr3L_6050001 RAL-913 1967 chr3L 6052625 6052632 chr3L 6052749 6052765 4 129 11.0 10.0 10.5 0.3 140 chr3L 6052625 exon Jon65Aii + chr3L 6052695 intron Jon65Aii + chr3L 6052765 exon Jon65Aii + chr3L_4_6050001 chr3L_6050001 RAL-913 1968 chr3L 6052635 6052658 chr3L 6052739 6052743 10 117 8.0 9.0 8.5 1.1 108 chr3L 6052635 exon Jon65Aii + chr3L 6052689 intron Jon65Aii + chr3L 6052743 exon Jon65Aii + chr3L_10_6050001 chr3L_6050001 RAL-913 1969 chr3L 6064963 6065044 chr3L 6065090 6065171 29 127 7.0 8.5 7.8 3.3 208 chr3L 6064963 intergenic not near genes chr3L 6065067 intergenic not near genes chr3L 6065171 intergenic not near genes chr3L_29_6065001 chr3L_6065001 RAL-913 1970 chr3L 6155654 6155713 chr3L 6155790 6155849 29 134 11.0 10.0 10.5 2.5 195 chr3L 6155654 intergenic CR45421 - chr3L 6155752 intergenic not near genes chr3L 6155849 intergenic not near genes chr3L_29_6155001 chr3L_6155001 RAL-913 1971 chr3L 6220876 6220936 chr3L 6230078 6230138 roo 28 9202 9.5 7.5 8.5 2.9 9262 chr3L 6220876 5` UTR pncr008:3L + chr3L 6225507 intergenic not near genes chr3L 6230138 intergenic not near genes chr3L_28_6225001 chr3L_6225001 RAL-913 1972 chr3L 6231176 6231368 chr3L 6231262 6231499 15 131 28.5 34.0 31.2 0.5 323 chr3L 6231176 intergenic not near genes chr3L 6231338 intergenic CG13299 - chr3L 6231499 intergenic CG13299 - chr3L_15_6230001 chr3L_6230001 RAL-913 1973 chr3L 6334966 6334975 chr3L 6335487 6335496 297 4 520 13.0 6.0 9.5 0.4 530 chr3L 6334966 intron CG13300 - chr3L 6335231 intron CG13300 - chr3L 6335496 intron CG13300 - chr3L_4_6335001 chr3L_6335001 RAL-913 1974 chr3L 6334976 6335035 chr3L 6335485 6335556 297 23 520 5.0 6.0 5.5 3.5 580 chr3L 6334976 intron CG13300 - chr3L 6335266 intron CG13300 - chr3L 6335556 intron CG13300 - chr3L_23_6335001 chr3L_6335001 RAL-913 1975 chr3L 6353362 6353408 chr3L 6353466 6353538 8 120 14.5 14.5 14.5 0.5 176 chr3L 6353362 intergenic not near genes chr3L 6353450 intergenic not near genes chr3L 6353538 intergenic not near genes chr3L_8_6350001 chr3L_6350001 RAL-913 1976 chr3L 6362336 6362409 chr3L 6362463 6362536 12 127 9.0 6.0 7.5 1.4 200 chr3L 6362336 intergenic not near genes chr3L 6362436 intergenic not near genes chr3L 6362536 intergenic not near genes chr3L_12_6360001 chr3L_6360001 RAL-913 1977 chr3L 6366845 6366848 chr3L 7946343 7946346 5 1579498 0.0 27.5 13.8 0.3 1579501 chr3L 6366845 intergenic not near genes chr3L 7156596 5` UTR corn - chr3L 7946346 intergenic CG43880 - chr3L_5_7155001 chr3L_7155001 RAL-913 1978 chr3L 6369720 6369735 chr3L 6369874 6369889 9 154 13.5 0.0 6.8 1.2 169 chr3L 6369720 intergenic CR45419 - chr3L 6369804 intergenic CR45419 - chr3L 6369889 intergenic CR45419 - chr3L_9_6365001 chr3L_6365001 RAL-913 1979 chr3L 6371425 6371455 chr3L 6371522 6371587 8 117 3.5 8.0 5.8 1.2 162 chr3L 6371425 intergenic not near genes chr3L 6371506 intergenic not near genes chr3L 6371587 intergenic not near genes chr3L_8_6370001 chr3L_6370001 RAL-913 1980 chr3L 6405617 6405680 chr3L 6432132 6432194 roo 14 26514 9.0 9.0 9.0 1.4 26577 chr3L 6405617 intron CG42747 + chr3L 6418906 intron CG42747 + chr3L 6432194 intron CG42747 + chr3L_14_6415001 chr3L_6415001 RAL-913 1981 chr3L 6449078 6449093 chr3L 6449370 6449385 5 292 24.5 21.5 23.0 0.2 307 chr3L 6449078 intron CG42747 + chr3L 6449232 intron CG42747 + chr3L 6449385 intron CG42747 + chr3L_5_6445001 chr3L_6445001 RAL-913 1982 chr3L 6449099 6449112 chr3L 6449363 6449404 4 285 19.5 19.5 19.5 0.2 305 chr3L 6449099 intron CG42747 + chr3L 6449252 intron CG42747 + chr3L 6449404 intron CG42747 + chr3L_4_6445001 chr3L_6445001 RAL-913 1983 chr3L 6449116 6449142 chr3L 6449361 6449423 7 269 16.0 18.5 17.2 0.4 307 chr3L 6449116 5` UTR CG42747 + chr3L 6449270 intron CG42747 + chr3L 6449423 intron CG42747 + chr3L_7_6445001 chr3L_6445001 RAL-913 1984 chr3L 6503357 6503432 chr3L 6503500 6503575 11 142 16.5 13.0 14.8 0.7 218 chr3L 6503357 intron sfl + chr3L 6503466 intron sfl + chr3L 6503575 intron sfl + chr3L_11_6500001 chr3L_6500001 RAL-913 1985 chr3L 6506919 6506922 chr3L 8713266 8713269 4 2206347 27.5 49.5 38.5 0.1 2206350 chr3L 6506919 intron sfl + chr3L 7610094 intron CG33275 + chr3L 8713269 intergenic not near genes chr3L_4_7610001 chr3L_7610001 RAL-913 1986 chr3L 6513340 6513375 chr3L 6513476 6513511 8 136 28.0 24.0 26.0 0.3 171 chr3L 6513340 intron sfl + chr3L 6513426 intron sfl + chr3L 6513511 intron sfl + chr3L_8_6510001 chr3L_6510001 RAL-913 1987 chr3L 6582510 6582791 chr3L 6582642 6582940 17 146 12.5 13.5 13.0 1.2 430 chr3L 6582510 intron,intron CG18769 +,jv - chr3L 6582725 intron,intron CG18769 +,jv - chr3L 6582940 intron,intron CG18769 +,jv - chr3L_17_6580001 chr3L_6580001 RAL-913 1988 chr3L 6610156 6610215 chr3L 6610301 6610365 8 152 25.0 22.0 23.5 0.3 209 chr3L 6610156 intron CG8398 + chr3L 6610260 intron CG8398 + chr3L 6610365 intron CG8398 + chr3L_8_6610001 chr3L_6610001 RAL-913 1989 chr3L 6620564 6620598 chr3L 6621054 6621081 Rt1c 18 488 5.5 10.0 7.8 2.0 517 chr3L 6620564 intergenic not near genes chr3L 6620822 intergenic not near genes chr3L 6621081 intergenic not near genes chr3L_18_6620001 chr3L_6620001 RAL-913 1990 chr3L 6621690 6621747 chr3L 6621923 6621980 13 231 34.0 32.0 33.0 0.4 290 chr3L 6621690 intergenic not near genes chr3L 6621835 intergenic not near genes chr3L 6621980 intergenic not near genes chr3L_13_6620001 chr3L_6620001 RAL-913 1991 chr3L 6641660 6641708 chr3L 6642048 6642096 4 388 13.5 3.5 8.5 0.4 436 chr3L 6641660 intergenic CR45238 + chr3L 6641878 intergenic CR45238 +,CR45239 + chr3L 6642096 intergenic CR45239 + chr3L_4_6640001 chr3L_6640001 RAL-913 1992 chr3L 6652033 6652109 chr3L 6652161 6652237 28 126 20.0 18.5 19.2 1.4 204 chr3L 6652033 intergenic not near genes chr3L 6652135 intergenic not near genes chr3L 6652237 intergenic not near genes chr3L_28_6650001 chr3L_6650001 RAL-913 1993 chr3L 6668926 6668963 chr3L 6669048 6669094 14 129 24.5 14.0 19.2 0.7 168 chr3L 6668926 intergenic not near genes chr3L 6669010 intergenic not near genes chr3L 6669094 intergenic not near genes chr3L_14_6665001 chr3L_6665001 RAL-913 1994 chr3L 6668992 6668995 chr3L 6669123 6669125 4 131 19.5 12.0 15.8 0.2 133 chr3L 6668992 intergenic not near genes chr3L 6669058 intergenic not near genes chr3L 6669125 intergenic not near genes chr3L_4_6665001 chr3L_6665001 RAL-913 1995 chr3L 6726802 6726825 chr3L 6726928 6726951 8 126 0.0 9.0 4.5 1.5 149 chr3L 6726802 intergenic not near genes chr3L 6726876 intergenic not near genes chr3L 6726951 intergenic not near genes chr3L_8_6725001 chr3L_6725001 RAL-913 1996 chr3L 6781075 6781137 chr3L 6783138 6783200 Doc 34 2063 14.0 9.5 11.8 2.7 2125 chr3L 6781075 intergenic not near genes chr3L 6782138 intergenic not near genes chr3L 6783200 intergenic not near genes chr3L_34_6780001 chr3L_6780001 RAL-913 1997 chr3L 6786849 6786913 chr3L 6786992 6787056 12 140 29.5 27.5 28.5 0.4 207 chr3L 6786849 3` UTR CR45759 - chr3L 6786952 3` UTR CR45759 - chr3L 6787056 3` UTR CR45759 - chr3L_12_6785001 chr3L_6785001 RAL-913 1998 chr3L 6804702 6804713 chr3L 6804837 6804848 5 135 3.5 10.5 7.0 0.6 146 chr3L 6804702 intergenic not near genes chr3L 6804775 intergenic not near genes chr3L 6804848 intergenic not near genes chr3L_5_6800001 chr3L_6800001 RAL-913 1999 chr3L 6820592 6820650 chr3L 6820726 6820781 9 133 5.5 8.5 7.0 1.1 189 chr3L 6820592 intergenic not near genes chr3L 6820686 intergenic not near genes chr3L 6820781 intergenic not near genes chr3L_9_6820001 chr3L_6820001 RAL-913 2000 chr3L 6835894 6835922 chr3L 6836014 6836050 5 126 24.5 22.0 23.2 0.2 156 chr3L 6835894 intergenic not near genes chr3L 6835972 intergenic not near genes chr3L 6836050 intergenic not near genes chr3L_5_6835001 chr3L_6835001 RAL-913 2001 chr3L 6855881 6855943 chr3L 6860715 6860777 Doc 19 4831 5.0 5.0 5.0 3.2 4896 chr3L 6855881 intergenic not near genes chr3L 6858329 intergenic not near genes chr3L 6860777 intergenic not near genes chr3L_19_6855001 chr3L_6855001 RAL-913 2002 chr3L 6865454 6865458 chr3L 6865600 6865605 4 146 0.5 13.0 6.8 0.5 151 chr3L 6865454 3` UTR CR45115 - chr3L 6865530 3` UTR CR45115 - chr3L 6865605 3` UTR CR45115 - chr3L_4_6865001 chr3L_6865001 RAL-913 2003 chr3L 6868668 6868741 chr3L 6868796 6868869 20 128 0.0 11.5 5.8 2.9 201 chr3L 6868668 intergenic not near genes chr3L 6868768 intergenic not near genes chr3L 6868869 intergenic not near genes chr3L_20_6865001 chr3L_6865001 RAL-913 2004 chr3L 6887485 6887534 chr3L 6895015 6895076 roo 29 7540 11.5 13.5 12.5 2.1 7591 chr3L 6887485 intergenic not near genes chr3L 6891280 intergenic not near genes chr3L 6895076 intergenic not near genes chr3L_29_6890001 chr3L_6890001 RAL-913 2005 chr3L 6900248 6900302 chr3L 6900389 6900431 12 139 11.0 7.0 9.0 1.2 183 chr3L 6900248 intergenic not near genes chr3L 6900340 intergenic not near genes chr3L 6900431 intergenic not near genes chr3L_12_6900001 chr3L_6900001 RAL-913 2006 chr3L 6900833 6900852 chr3L 6900959 6900978 4 126 4.5 19.0 11.8 0.3 145 chr3L 6900833 intergenic not near genes chr3L 6900906 intergenic not near genes chr3L 6900978 intergenic not near genes chr3L_4_6900001 chr3L_6900001 RAL-913 2007 chr3L 6908013 6908045 chr3L 6908141 6908173 15 128 9.0 7.5 8.2 1.6 160 chr3L 6908013 intergenic not near genes chr3L 6908093 intergenic not near genes chr3L 6908173 intergenic not near genes chr3L_15_6905001 chr3L_6905001 RAL-913 2008 chr3L 6919729 6919779 chr3L 6919859 6919909 6 130 23.5 19.0 21.2 0.3 180 chr3L 6919729 intergenic not near genes chr3L 6919819 intergenic not near genes chr3L 6919909 intergenic not near genes chr3L_6_6915001 chr3L_6915001 RAL-913 2009 chr3L 6942019 6942070 chr3L 6942168 6942219 17 148 23.5 33.5 28.5 0.6 200 chr3L 6942019 intergenic not near genes chr3L 6942119 intergenic not near genes chr3L 6942219 intergenic not near genes chr3L_17_6940001 chr3L_6940001 RAL-913 2010 chr3L 6974441 6974519 chr3L 6974591 6974659 15 150 16.0 20.0 18.0 0.8 218 chr3L 6974441 exon Galphai - chr3L 6974550 intron Galphai - chr3L 6974659 intron Galphai - chr3L_15_6970001 chr3L_6970001 RAL-913 2011 chr3L 6981903 6981936 chr3L 6982107 6982140 11 204 1.5 6.5 4.0 2.2 237 chr3L 6981903 intergenic not near genes chr3L 6982022 intergenic not near genes chr3L 6982140 intergenic not near genes chr3L_11_6980001 chr3L_6980001 RAL-913 2012 chr3L 6993477 6993529 chr3L 6993609 6993661 12 130 13.0 15.5 14.2 0.8 184 chr3L 6993477 intron bin + chr3L 6993569 intron bin + chr3L 6993661 intron bin + chr3L_12_6990001 chr3L_6990001 RAL-913 2013 chr3L 6994846 6994904 chr3L 6995497 6995565 BS 8 660 15.0 21.5 18.2 0.4 719 chr3L 6994846 intergenic bin + chr3L 6995206 intergenic not near genes chr3L 6995565 intergenic not near genes chr3L_8_6995001 chr3L_6995001 RAL-913 2014 chr3L 7001956 7001975 chr3L 7002127 7002145 5 171 14.5 13.5 14.0 0.3 189 chr3L 7001956 intron Mp + chr3L 7002050 intron Mp + chr3L 7002145 intron Mp + chr3L_5_7000001 chr3L_7000001 RAL-913 2015 chr3L 7033125 7033195 chr3L 7033255 7033285 6 121 19.0 19.5 19.2 0.3 160 chr3L 7033125 intron Mp + chr3L 7033205 intron Mp + chr3L 7033285 intron Mp + chr3L_6_7030001 chr3L_7030001 RAL-913 2016 chr3L 7079575 7079830 chr3L 7079696 7079992 32 148 14.5 26.5 20.5 1.5 417 chr3L 7079575 intergenic not near genes chr3L 7079784 intergenic not near genes chr3L 7079992 intergenic not near genes chr3L_32_7075001 chr3L_7075001 RAL-913 2017 chr3L 7112544 7112603 chr3L 7112681 7112740 23 136 26.0 25.0 25.5 0.9 196 chr3L 7112544 intron form3 + chr3L 7112642 intron form3 + chr3L 7112740 intron form3 + chr3L_23_7110001 chr3L_7110001 RAL-913 2018 chr3L 7129912 7129963 chr3L 7130154 7130205 BS 19 242 12.0 16.0 14.0 1.3 293 chr3L 7129912 intergenic CG15829 + chr3L 7130058 intergenic CG15829 + chr3L 7130205 intergenic not near genes chr3L_19_7130001 chr3L_7130001 RAL-913 2019 chr3L 7185693 7185740 chr3L 7185922 7185970 10 230 16.5 33.0 24.8 0.4 277 chr3L 7185693 intron Dscam2 - chr3L 7185832 intron Dscam2 - chr3L 7185970 intron Dscam2 - chr3L_10_7185001 chr3L_7185001 RAL-913 2020 chr3L 7244902 7244958 chr3L 7245030 7245100 13 130 20.0 16.5 18.2 0.7 198 chr3L 7244902 exon mei-P22 + chr3L 7245001 exon mei-P22 + chr3L 7245100 exon mei-P22 + chr3L_13_7240001 chr3L_7240001 RAL-913 2021 chr3L 7258878 7258933 chr3L 7259068 7259123 15 189 7.5 17.5 12.5 1.1 245 chr3L 7258878 intron CG14830 - chr3L 7259000 intron CG14830 - chr3L 7259123 intron CG14830 - chr3L_15_7255001 chr3L_7255001 RAL-913 2022 chr3L 7272285 7272361 chr3L 7272422 7272494 7 134 10.5 10.0 10.2 0.6 209 chr3L 7272285 intron unc-13-4A - chr3L 7272390 intron unc-13-4A - chr3L 7272494 intron unc-13-4A - chr3L_7_7270001 chr3L_7270001 RAL-913 2023 chr3L 7274677 7274740 chr3L 7274831 7274892 8 154 3.0 11.5 7.2 1.0 215 chr3L 7274677 intron unc-13-4A - chr3L 7274784 intron unc-13-4A - chr3L 7274892 intron unc-13-4A - chr3L_8_7270001 chr3L_7270001 RAL-913 2024 chr3L 7276109 7276172 chr3L 7276239 7276299 6 128 20.0 21.0 20.5 0.3 190 chr3L 7276109 intron unc-13-4A - chr3L 7276204 intron unc-13-4A - chr3L 7276299 intron unc-13-4A - chr3L_6_7275001 chr3L_7275001 RAL-913 2025 chr3L 7277066 7277124 chr3L 7277215 7277276 12 152 18.5 17.5 18.0 0.6 210 chr3L 7277066 exon unc-13-4A - chr3L 7277171 intron unc-13-4A - chr3L 7277276 intron unc-13-4A - chr3L_12_7275001 chr3L_7275001 RAL-913 2026 chr3L 7285408 7285437 chr3L 7285536 7285564 6 127 15.0 24.0 19.5 0.3 156 chr3L 7285408 intron unc-13-4A - chr3L 7285486 intron unc-13-4A - chr3L 7285564 intron unc-13-4A - chr3L_6_7285001 chr3L_7285001 RAL-913 2027 chr3L 7285452 7285458 chr3L 7285533 7285586 4 116 17.0 23.5 20.2 0.2 134 chr3L 7285452 intron unc-13-4A - chr3L 7285519 intron unc-13-4A - chr3L 7285586 intron unc-13-4A - chr3L_4_7285001 chr3L_7285001 RAL-913 2028 chr3L 7315438 7315499 chr3L 7315579 7315633 18 142 27.0 20.5 23.8 0.7 195 chr3L 7315438 intergenic not near genes chr3L 7315536 intergenic not near genes chr3L 7315633 intergenic not near genes chr3L_18_7315001 chr3L_7315001 RAL-913 2029 chr3L 7318145 7318201 chr3L 7318290 7318346 12 145 30.0 27.5 28.8 0.4 201 chr3L 7318145 intergenic not near genes chr3L 7318246 intergenic not near genes chr3L 7318346 intergenic not near genes chr3L_12_7315001 chr3L_7315001 RAL-913 2030 chr3L 7328998 7329024 chr3L 7329135 7329161 4 137 22.0 24.5 23.2 0.2 163 chr3L 7328998 intergenic CG42307 +,mus312 +,CG8602 - chr3L 7329080 intergenic CG42307 +,mus312 +,CG8602 - chr3L 7329161 5` UTR,5` UTR CG42307 +,mus312 + chr3L_4_7325001 chr3L_7325001 RAL-913 2031 chr3L 7371156 7371203 chr3L 7371289 7371336 18 134 21.0 26.0 23.5 0.7 180 chr3L 7371156 intron akirin + chr3L 7371246 intron akirin + chr3L 7371336 intron akirin + chr3L_18_7370001 chr3L_7370001 RAL-913 2032 chr3L 7375883 7375938 chr3L 7376009 7376064 21 126 20.0 21.5 20.8 1.0 181 chr3L 7375883 exon SMSr - chr3L 7375974 intron SMSr - chr3L 7376064 intron SMSr - chr3L_21_7375001 chr3L_7375001 RAL-913 2033 chr3L 7377269 7377342 chr3L 7380424 7380497 297 43 3155 10.5 11.0 10.8 3.6 3228 chr3L 7377269 intron SMSr - chr3L 7378883 intron SMSr - chr3L 7380497 intron SMSr - chr3L_43_7375001 chr3L_7375001 RAL-913 2034 chr3L 7397833 7397900 chr3L 7397991 7398058 15 154 21.0 14.0 17.5 0.8 225 chr3L 7397833 exon CG32379 + chr3L 7397946 exon CG32379 + chr3L 7398058 exon CG32379 + chr3L_15_7395001 chr3L_7395001 RAL-913 2035 chr3L 7418192 7418203 chr3L 7418325 7418336 6 133 10.0 26.0 18.0 0.3 144 chr3L 7418192 intergenic not near genes chr3L 7418264 intergenic not near genes chr3L 7418336 intergenic not near genes chr3L_6_7415001 chr3L_7415001 RAL-913 2036 chr3L 7418210 7418241 chr3L 7418324 7418364 11 130 16.5 26.0 21.2 0.5 154 chr3L 7418210 intergenic not near genes chr3L 7418287 intergenic not near genes chr3L 7418364 intergenic not near genes chr3L_11_7415001 chr3L_7415001 RAL-913 2037 chr3L 7450642 7450716 chr3L 7450774 7450846 32 130 6.0 5.5 5.8 4.7 204 chr3L 7450642 intron CG42458 + chr3L 7450744 intron CG42458 + chr3L 7450846 intron CG42458 + chr3L_32_7450001 chr3L_7450001 RAL-913 2038 chr3L 7480007 7480072 chr3L 7480146 7480211 18 138 5.5 6.0 5.8 2.6 204 chr3L 7480007 intergenic not near genes chr3L 7480109 intergenic not near genes chr3L 7480211 intergenic not near genes chr3L_18_7480001 chr3L_7480001 RAL-913 2039 chr3L 7498721 7498774 chr3L 7503549 7503602 F-element 23 4828 16.5 12.5 14.5 1.5 4881 chr3L 7498721 5` UTR CG8539 - chr3L 7501162 intergenic not near genes chr3L 7503602 intergenic not near genes chr3L_23_7500001 chr3L_7500001 RAL-913 2040 chr3L 7505366 7505442 chr3L 7505492 7505568 17 125 4.5 9.0 6.8 2.2 202 chr3L 7505366 intergenic CG7548 - chr3L 7505467 intergenic CG7548 - chr3L 7505568 3` UTR CG7548 - chr3L_17_7505001 chr3L_7505001 RAL-913 2041 chr3L 7505731 7505741 chr3L 7505870 7505880 6 138 18.5 20.0 19.2 0.3 149 chr3L 7505731 exon CG7548 - chr3L 7505806 exon CG7548 - chr3L 7505880 exon CG7548 - chr3L_6_7505001 chr3L_7505001 RAL-913 2042 chr3L 7524103 7524174 chr3L 7524230 7524306 13 131 14.0 18.0 16.0 0.8 203 chr3L 7524103 intron ltl + chr3L 7524204 intron ltl + chr3L 7524306 intron ltl + chr3L_13_7520001 chr3L_7520001 RAL-913 2043 chr3L 7572243 7572294 chr3L 7572380 7572402 13 128 14.0 15.0 14.5 0.8 159 chr3L 7572243 intergenic not near genes chr3L 7572322 intergenic not near genes chr3L 7572402 intergenic not near genes chr3L_13_7570001 chr3L_7570001 RAL-913 2044 chr3L 7574661 7574860 chr3L 7574796 7574987 10 137 26.0 25.0 25.5 0.4 326 chr3L 7574661 intergenic not near genes chr3L 7574824 intergenic not near genes chr3L 7574987 intergenic not near genes chr3L_10_7570001 chr3L_7570001 RAL-913 2045 chr3L 7591096 7591146 chr3L 7591237 7591280 9 138 12.0 6.0 9.0 0.9 184 chr3L 7591096 intergenic CG7716 - chr3L 7591188 intergenic CG7716 - chr3L 7591280 intergenic CG7716 - chr3L_9_7590001 chr3L_7590001 RAL-913 2046 chr3L 7591149 7591179 chr3L 7591236 7591290 16 123 4.5 6.0 5.2 2.6 141 chr3L 7591149 intergenic CG7716 - chr3L 7591220 intergenic CG7716 - chr3L 7591290 intergenic CG7716 - chr3L_16_7590001 chr3L_7590001 RAL-913 2047 chr3L 7617651 7617695 chr3L 7617810 7617851 8 158 10.5 6.5 8.5 0.8 200 chr3L 7617651 intron CG33275 + chr3L 7617751 intron CG33275 + chr3L 7617851 intron CG33275 + chr3L_8_7615001 chr3L_7615001 RAL-913 2048 chr3L 7640665 7640721 chr3L 7640839 7640895 9 172 28.5 23.5 26.0 0.3 230 chr3L 7640665 intergenic CG7506 -,CG33276 - chr3L 7640780 intergenic CG7506 -,CG33276 - chr3L 7640895 exon CG7506 - chr3L_9_7640001 chr3L_7640001 RAL-913 2049 chr3L 7744670 7744735 chr3L 7744806 7744877 24 142 13.5 15.0 14.2 1.6 207 chr3L 7744670 intron CG32373 + chr3L 7744774 intron CG32373 + chr3L 7744877 intron CG32373 + chr3L_24_7740001 chr3L_7740001 RAL-913 2050 chr3L 7760938 7760992 chr3L 7761073 7761127 14 134 16.5 23.0 19.8 0.7 189 chr3L 7760938 intron Hn + chr3L 7761032 intron Hn + chr3L 7761127 intron Hn + chr3L_14_7760001 chr3L_7760001 RAL-913 2051 chr3L 7767530 7767549 chr3L 7767711 7767730 4 180 29.0 26.5 27.8 0.1 200 chr3L 7767530 intron,exon Clk -,CG32371 - chr3L 7767630 intron,exon Clk -,CG32371 - chr3L 7767730 intron,exon Clk -,CG32371 - chr3L_4_7765001 chr3L_7765001 RAL-913 2052 chr3L 7769244 7769322 chr3L 7769388 7769466 22 143 7.0 9.0 8.0 2.4 222 chr3L 7769244 intron Clk - chr3L 7769355 intron Clk - chr3L 7769466 intron Clk - chr3L_22_7765001 chr3L_7765001 RAL-913 2053 chr3L 7793671 7793735 chr3L 7800773 7800837 297 30 7102 14.0 15.5 14.8 1.9 7166 chr3L 7793671 intron CG32369 - chr3L 7797254 intron CG32369 - chr3L 7800837 intron CG32369 - chr3L_30_7795001 chr3L_7795001 RAL-913 2054 chr3L 7843122 7843146 chr3L 7843264 7843287 4 142 30.5 32.0 31.2 0.1 165 chr3L 7843122 intron Pdp1 - chr3L 7843204 intron Pdp1 - chr3L 7843287 intron Pdp1 - chr3L_4_7840001 chr3L_7840001 RAL-913 2055 chr3L 7856397 7856423 chr3L 7856508 7856556 6 129 28.5 27.5 28.0 0.2 159 chr3L 7856397 intron Pdp1 - chr3L 7856476 intron Pdp1 - chr3L 7856556 intron Pdp1 - chr3L_6_7855001 chr3L_7855001 RAL-913 2056 chr3L 7867764 7867801 chr3L 7867892 7867929 7 128 23.0 27.0 25.0 0.3 165 chr3L 7867764 intergenic Pdp1 - chr3L 7867846 intergenic Pdp1 - chr3L 7867929 intergenic not near genes chr3L_7_7865001 chr3L_7865001 RAL-913 2057 chr3L 7871042 7871054 chr3L 7871191 7871203 6 149 8.5 7.5 8.0 0.7 161 chr3L 7871042 intron CG32365 + chr3L 7871122 intron CG32365 + chr3L 7871203 intron CG32365 + chr3L_6_7870001 chr3L_7870001 RAL-913 2058 chr3L 7886470 7886545 chr3L 7889038 7889058 Stalker4 27 2563 5.0 15.0 10.0 2.5 2588 chr3L 7886470 intron CG32365 + chr3L 7887764 intron CG32365 + chr3L 7889058 intron CG32365 + chr3L_27_7885001 chr3L_7885001 RAL-913 2059 chr3L 7916785 7916849 chr3L 7926006 7926070 roo 29 9220 15.0 10.5 12.8 2.1 9285 chr3L 7916785 3` UTR syd - chr3L 7921428 intron syd - chr3L 7926070 3` UTR syd - chr3L_29_7920001 chr3L_7920001 RAL-913 2060 chr3L 7949229 7949278 chr3L 7949344 7949404 10 124 21.0 22.0 21.5 0.4 175 chr3L 7949229 exon exex + chr3L 7949316 intron exex + chr3L 7949404 intron exex + chr3L_10_7945001 chr3L_7945001 RAL-913 2061 chr3L 7982212 7982266 chr3L 7982342 7982364 8 116 16.5 15.5 16.0 0.5 152 chr3L 7982212 intron nmo + chr3L 7982288 intron nmo + chr3L 7982364 intron nmo + chr3L_8_7980001 chr3L_7980001 RAL-913 2062 chr3L 7985329 7985385 chr3L 7987708 7987763 NOF 24 2377 15.5 17.0 16.2 1.4 2434 chr3L 7985329 intron nmo + chr3L 7986546 intron nmo + chr3L 7987763 intron nmo + chr3L_24_7985001 chr3L_7985001 RAL-913 2063 chr3L 7995343 7995364 chr3L 7995557 7995578 4 213 8.0 20.0 14.0 0.3 235 chr3L 7995343 intron nmo + chr3L 7995460 intron nmo + chr3L 7995578 intron nmo + chr3L_4_7995001 chr3L_7995001 RAL-913 2064 chr3L 8008164 8008220 chr3L 8008301 8008357 14 136 29.0 28.0 28.5 0.5 193 chr3L 8008164 intron nmo + chr3L 8008260 intron nmo + chr3L 8008357 intron nmo + chr3L_14_8005001 chr3L_8005001 RAL-913 2065 chr3L 8019655 8019730 chr3L 8024118 8024184 NOF 20 4454 8.0 11.0 9.5 1.9 4529 chr3L 8019655 intron nmo + chr3L 8021920 intron nmo + chr3L 8024184 intron nmo + chr3L_20_8020001 chr3L_8020001 RAL-913 2066 chr3L 8026550 8026627 chr3L 8026676 8026755 25 128 7.5 5.5 6.5 3.3 205 chr3L 8026550 intron nmo + chr3L 8026652 intron nmo + chr3L 8026755 intron nmo + chr3L_25_8025001 chr3L_8025001 RAL-913 2067 chr3L 8042565 8042629 chr3L 8044891 8044955 15 2328 16.0 45.5 30.8 0.5 2390 chr3L 8042565 intron nmo + chr3L 8043760 intron nmo + chr3L 8044955 intron nmo + chr3L_15_8040001 chr3L_8040001 RAL-913 2068 chr3L 8060021 8060051 chr3L 8060170 8060200 9 149 17.5 24.0 20.8 0.4 179 chr3L 8060021 intergenic not near genes chr3L 8060110 intergenic not near genes chr3L 8060200 intergenic not near genes chr3L_9_8060001 chr3L_8060001 RAL-913 2069 chr3L 8062801 8062938 chr3L 8062930 8063124 17 136 5.5 4.0 4.8 2.9 323 chr3L 8062801 intergenic not near genes chr3L 8062962 intergenic not near genes chr3L 8063124 intergenic not near genes chr3L_17_8060001 chr3L_8060001 RAL-913 2070 chr3L 8064565 8064632 chr3L 8064829 8064864 13 261 41.5 43.5 42.5 0.3 299 chr3L 8064565 intron Ect4 + chr3L 8064714 intron Ect4 + chr3L 8064864 intron Ect4 + chr3L_13_8060001 chr3L_8060001 RAL-913 2071 chr3L 8075309 8075375 chr3L 8075445 8075511 12 136 30.5 31.0 30.8 0.4 202 chr3L 8075309 intron Ect4 + chr3L 8075410 intron Ect4 + chr3L 8075511 intron Ect4 + chr3L_12_8075001 chr3L_8075001 RAL-913 2072 chr3L 8081229 8081307 chr3L 8081382 8081460 11 153 28.5 31.5 30.0 0.4 231 chr3L 8081229 intron Ect4 + chr3L 8081344 intron Ect4 + chr3L 8081460 intron Ect4 + chr3L_11_8080001 chr3L_8080001 RAL-913 2073 chr3L 8149717 8149773 chr3L 8149873 8149929 19 156 24.0 28.0 26.0 0.7 212 chr3L 8149717 intron CG13676 - chr3L 8149823 intron CG13676 - chr3L 8149929 intron CG13676 - chr3L_19_8145001 chr3L_8145001 RAL-913 2074 chr3L 8210751 8210798 chr3L 8210916 8210963 17 164 11.0 9.0 10.0 1.5 212 chr3L 8210751 intergenic CG32364 - chr3L 8210857 intergenic CG32364 - chr3L 8210963 intergenic CG32364 - chr3L_17_8210001 chr3L_8210001 RAL-913 2075 chr3L 8214690 8214758 chr3L 8214819 8214894 14 135 15.0 14.0 14.5 0.9 204 chr3L 8214690 intergenic not near genes chr3L 8214792 intergenic CG8012 + chr3L 8214894 intergenic CG8012 + chr3L_14_8210001 chr3L_8210001 RAL-913 2076 chr3L 8226669 8226750 chr3L 8226818 8226892 14 148 2.0 0.0 1.0 7.0 223 chr3L 8226669 intergenic not near genes chr3L 8226780 intergenic not near genes chr3L 8226892 intergenic not near genes chr3L_14_8225001 chr3L_8225001 RAL-913 2077 chr3L 8233551 8233585 chr3L 8238862 8238897 Rt1a 8 5312 7.0 29.5 18.2 0.4 5346 chr3L 8233551 intron CG7213 - chr3L 8236224 intron CG7213 - chr3L 8238897 intron,intron CG7213 -,Dscam4 + chr3L_8_8235001 chr3L_8235001 RAL-913 2078 chr3L 8243783 8243836 chr3L 8243916 8243969 16 132 18.5 22.5 20.5 0.7 186 chr3L 8243783 intron Dscam4 + chr3L 8243876 intron Dscam4 + chr3L 8243969 intron Dscam4 + chr3L_16_8240001 chr3L_8240001 RAL-913 2079 chr3L 8295748 8295808 chr3L 8295956 8296016 23 208 21.0 24.0 22.5 1.0 268 chr3L 8295748 intergenic CG7201 - chr3L 8295882 intergenic not near genes chr3L 8296016 intergenic not near genes chr3L_23_8295001 chr3L_8295001 RAL-913 2080 chr3L 8363681 8363760 chr3L 8363811 8363892 11 132 29.5 27.0 28.2 0.4 211 chr3L 8363681 intergenic not near genes chr3L 8363786 intergenic not near genes chr3L 8363892 intergenic not near genes chr3L_11_8360001 chr3L_8360001 RAL-913 2081 chr3L 8373412 8373433 chr3L 8373528 8373570 6 127 18.5 19.0 18.8 0.3 158 chr3L 8373412 intron ImpE1 + chr3L 8373491 intron ImpE1 + chr3L 8373570 intron ImpE1 + chr3L_6_8370001 chr3L_8370001 RAL-913 2082 chr3L 8385221 8385287 chr3L 8385357 8385412 12 134 23.5 27.0 25.2 0.5 191 chr3L 8385221 intron ImpE1 + chr3L 8385316 intron ImpE1 + chr3L 8385412 intron ImpE1 + chr3L_12_8385001 chr3L_8385001 RAL-913 2083 chr3L 8392552 8392694 chr3L 8392693 8392825 5 148 20.5 22.0 21.2 0.2 273 chr3L 8392552 intergenic Jon66Ci +,Jon66Cii - chr3L 8392688 intergenic Jon66Cii -,Jon66Ci + chr3L 8392825 3` UTR Jon66Cii - chr3L_5_8390001 chr3L_8390001 RAL-913 2084 chr3L 8395796 8395811 chr3L 8395942 8395957 6 146 23.5 22.0 22.8 0.3 161 chr3L 8395796 intergenic CG7120 + chr3L 8395876 intergenic CG7120 + chr3L 8395957 intergenic CG7120 + chr3L_6_8395001 chr3L_8395001 RAL-913 2085 chr3L 8442899 8442906 chr3L 8443025 8443032 4 126 24.0 38.0 31.0 0.1 133 chr3L 8442899 intergenic CG6983 - chr3L 8442966 intergenic CG6983 - chr3L 8443032 intergenic CG6983 - chr3L_4_8440001 chr3L_8440001 RAL-913 2086 chr3L 8443518 8443582 chr3L 8443649 8443714 34 131 5.0 6.5 5.8 5.0 196 chr3L 8443518 3` UTR CG6983 - chr3L 8443616 3` UTR CG6983 - chr3L 8443714 3` UTR CG6983 - chr3L_34_8440001 chr3L_8440001 RAL-913 2087 chr3L 8445650 8445727 chr3L 8445787 8445853 15 130 32.0 33.0 32.5 0.4 203 chr3L 8445650 intron CG6983 - chr3L 8445752 intron CG6983 - chr3L 8445853 intron CG6983 - chr3L_15_8445001 chr3L_8445001 RAL-913 2088 chr3L 8451332 8451409 chr3L 8451469 8451537 11 135 28.5 27.5 28.0 0.4 205 chr3L 8451332 intron Gug + chr3L 8451434 intron Gug + chr3L 8451537 intron Gug + chr3L_11_8450001 chr3L_8450001 RAL-913 2089 chr3L 8455593 8455629 chr3L 8455726 8455761 7 133 2.0 14.5 8.2 0.8 168 chr3L 8455593 intron Gug + chr3L 8455677 intron Gug + chr3L 8455761 intron Gug + chr3L_7_8455001 chr3L_8455001 RAL-913 2090 chr3L 8456429 8456484 chr3L 8456570 8456629 22 139 11.5 14.5 13.0 1.6 200 chr3L 8456429 intron Gug + chr3L 8456529 intron Gug + chr3L 8456629 intron Gug + chr3L_22_8455001 chr3L_8455001 RAL-913 2091 chr3L 8481745 8481806 chr3L 8490954 8490964 roo 19 9196 6.5 11.5 9.0 1.9 9219 chr3L 8481745 intron CG43163 - chr3L 8486354 intron CG43163 - chr3L 8490964 intron CG43163 - chr3L_19_8485001 chr3L_8485001 RAL-913 2092 chr3L 8498264 8498272 chr3L 8505781 8505789 blood 10 7517 19.0 9.0 14.0 0.7 7525 chr3L 8498264 intron CG43163 - chr3L 8502026 intron CG43163 - chr3L 8505789 intron CG43163 - chr3L_10_8500001 chr3L_8500001 RAL-913 2093 chr3L 8498275 8498321 chr3L 8505774 8505838 blood 21 7514 11.5 7.5 9.5 2.0 7563 chr3L 8498275 intron CG43163 - chr3L 8502056 intron CG43163 - chr3L 8505838 intron CG43163 - chr3L_21_8500001 chr3L_8500001 RAL-913 2094 chr3L 8523287 8523364 chr3L 8523415 8523416 11 119 26.0 26.0 26.0 0.4 129 chr3L 8523287 intron GstO2 - chr3L 8523352 intron GstO2 - chr3L 8523416 exon GstO2 - chr3L_11_8520001 chr3L_8520001 RAL-913 2095 chr3L 8545981 8546059 chr3L 8546116 8546194 22 135 6.0 6.5 6.2 3.1 213 chr3L 8545981 intron rhea + chr3L 8546088 intron rhea + chr3L 8546194 intron rhea + chr3L_22_8545001 chr3L_8545001 RAL-913 2096 chr3L 8614981 8615060 chr3L 8615107 8615189 29 128 22.5 20.0 21.2 1.3 208 chr3L 8614981 exon CG6282 + chr3L 8615085 intron CG6282 + chr3L 8615189 intron CG6282 + chr3L_29_8615001 chr3L_8615001 RAL-913 2097 chr3L 8642890 8642974 chr3L 8643037 8643113 10 146 27.5 27.5 27.5 0.4 223 chr3L 8642890 intron Cpr66D + chr3L 8643002 intron Cpr66D + chr3L 8643113 exon Cpr66D + chr3L_10_8640001 chr3L_8640001 RAL-913 2098 chr3L 8656039 8656073 chr3L 8656168 8656202 6 126 34.5 26.0 30.2 0.2 163 chr3L 8656039 intergenic not near genes chr3L 8656120 intergenic not near genes chr3L 8656202 intergenic not near genes chr3L_6_8655001 chr3L_8655001 RAL-913 2099 chr3L 8688744 8688766 chr3L 8688894 8688916 7 147 26.5 27.5 27.0 0.2 172 chr3L 8688744 intergenic not near genes chr3L 8688830 intergenic not near genes chr3L 8688916 intergenic not near genes chr3L_7_8685001 chr3L_8685001 RAL-913 2100 chr3L 8695809 8695876 chr3L 8695937 8696004 12 128 42.5 45.0 43.8 0.3 195 chr3L 8695809 intergenic not near genes chr3L 8695906 intergenic not near genes chr3L 8696004 intergenic not near genes chr3L_12_8695001 chr3L_8695001 RAL-913 2101 chr3L 8697109 8697174 chr3L 8697353 8697418 23 244 29.0 28.0 28.5 0.8 309 chr3L 8697109 intergenic not near genes chr3L 8697264 intergenic not near genes chr3L 8697418 intergenic not near genes chr3L_23_8695001 chr3L_8695001 RAL-913 2102 chr3L 8768664 8768671 chr3L 8768798 8768801 6 133 52.0 46.5 49.2 0.1 137 chr3L 8768664 intron Fhos + chr3L 8768732 intron Fhos + chr3L 8768801 intron Fhos + chr3L_6_8765001 chr3L_8765001 RAL-913 2103 chr3L 8768678 8768738 chr3L 8768797 8768872 16 131 41.0 46.5 43.8 0.4 194 chr3L 8768678 intron Fhos + chr3L 8768775 intron Fhos + chr3L 8768872 intron Fhos + chr3L_16_8765001 chr3L_8765001 RAL-913 2104 chr3L 8772011 8772082 chr3L 8772139 8772210 22 128 37.5 37.5 37.5 0.6 199 chr3L 8772011 intron Fhos + chr3L 8772110 intron Fhos + chr3L 8772210 intron Fhos + chr3L_22_8770001 chr3L_8770001 RAL-913 2105 chr3L 8791234 8791306 chr3L 8796704 8796775 I-element 21 5469 7.5 0.0 3.8 4.4 5541 chr3L 8791234 exon Fhos + chr3L 8794004 intron Fhos + chr3L 8796775 intron Fhos + chr3L_21_8790001 chr3L_8790001 RAL-913 2106 chr3L 8816915 8816949 chr3L 8817042 8817076 7 127 32.5 24.5 28.5 0.2 161 chr3L 8816915 intergenic not near genes chr3L 8816996 intergenic not near genes chr3L 8817076 intergenic not near genes chr3L_7_8815001 chr3L_8815001 RAL-913 2107 chr3L 8839676 8839749 chr3L 8839806 8839879 21 129 21.5 18.0 19.8 1.0 203 chr3L 8839676 intron dally + chr3L 8839778 intron dally + chr3L 8839879 intron dally + chr3L_21_8835001 chr3L_8835001 RAL-913 2108 chr3L 8846085 8846210 chr3L 8846220 8846341 29 132 4.5 5.5 5.0 4.8 256 chr3L 8846085 intron dally + chr3L 8846213 intron dally + chr3L 8846341 intron dally + chr3L_29_8845001 chr3L_8845001 RAL-913 2109 chr3L 8860825 8860870 chr3L 8861071 8861116 9 246 15.5 28.0 21.8 0.4 291 chr3L 8860825 intron dally + chr3L 8860970 intron dally + chr3L 8861116 intron dally + chr3L_9_8860001 chr3L_8860001 RAL-913 2110 chr3L 8861467 8861546 chr3L 8861617 8861687 15 147 24.5 23.5 24.0 0.6 220 chr3L 8861467 intron dally + chr3L 8861577 intron dally + chr3L 8861687 intron dally + chr3L_15_8860001 chr3L_8860001 RAL-913 2111 chr3L 8878356 8878414 chr3L 8878504 8878562 14 148 33.5 30.5 32.0 0.4 206 chr3L 8878356 intron dally + chr3L 8878459 intron dally + chr3L 8878562 intron dally + chr3L_14_8875001 chr3L_8875001 RAL-913 2112 chr3L 8912117 8912180 chr3L 8912288 8912340 4 166 15.0 2.0 8.5 0.4 223 chr3L 8912117 5` UTR mfr - chr3L 8912228 intron mfr - chr3L 8912340 5` UTR mfr - chr3L_4_8910001 chr3L_8910001 RAL-913 2113 chr3L 8928221 8928294 chr3L 8928347 8928420 15 126 19.0 21.5 20.2 0.7 199 chr3L 8928221 intron Tsp66E + chr3L 8928320 intron Tsp66E + chr3L 8928420 intron Tsp66E + chr3L_15_8925001 chr3L_8925001 RAL-913 2114 chr3L 8938567 8938626 chr3L 8938696 8938755 17 129 28.5 30.5 29.5 0.6 188 chr3L 8938567 intron,3` UTR CG43783 -,orb2 - chr3L 8938661 intron,3` UTR CG43783 -,orb2 - chr3L 8938755 intron,3` UTR CG43783 -,orb2 - chr3L_17_8935001 chr3L_8935001 RAL-913 2115 chr3L 8968236 8968304 chr3L 8968371 8968439 23 134 27.5 24.0 25.8 0.9 203 chr3L 8968236 intergenic CG5021 +,CG5026 + chr3L 8968338 intergenic CG5021 +,CG5026 + chr3L 8968439 intergenic CG5026 +,CG5021 + chr3L_23_8965001 chr3L_8965001 RAL-913 2116 chr3L 9003899 9003972 chr3L 9004034 9004107 34 132 8.0 8.5 8.2 3.7 208 chr3L 9003899 intergenic not near genes chr3L 9004003 intergenic not near genes chr3L 9004107 intergenic not near genes chr3L_34_9000001 chr3L_9000001 RAL-913 2117 chr3L 9009919 9009976 chr3L 9010073 9010130 13 154 16.5 21.0 18.8 0.7 211 chr3L 9009919 intergenic CG5194 - chr3L 9010024 intergenic CG5194 - chr3L 9010130 intergenic CG5194 - chr3L_13_9010001 chr3L_9010001 RAL-913 2118 chr3L 9011095 9011130 chr3L 9011232 9011267 9 137 17.0 14.0 15.5 0.5 172 chr3L 9011095 intergenic not near genes chr3L 9011181 intergenic not near genes chr3L 9011267 intergenic not near genes chr3L_9_9010001 chr3L_9010001 RAL-913 2119 chr3L 9017315 9017371 chr3L 9017436 9017467 6 117 15.5 15.5 15.5 0.4 152 chr3L 9017315 intron Doc2 - chr3L 9017391 intron Doc2 - chr3L 9017467 intron Doc2 - chr3L_6_9015001 chr3L_9015001 RAL-913 2120 chr3L 9018229 9018274 chr3L 9018338 9018403 7 122 28.5 31.5 30.0 0.2 174 chr3L 9018229 intron Doc2 - chr3L 9018316 intron Doc2 - chr3L 9018403 intron Doc2 - chr3L_7_9015001 chr3L_9015001 RAL-913 2121 chr3L 9026719 9026794 chr3L 9026845 9026920 12 123 19.5 20.0 19.8 0.6 201 chr3L 9026719 intergenic not near genes chr3L 9026820 intergenic not near genes chr3L 9026920 intergenic not near genes chr3L_12_9025001 chr3L_9025001 RAL-913 2122 chr3L 9030403 9030456 chr3L 9030532 9030585 19 129 13.5 16.0 14.8 1.2 182 chr3L 9030403 intergenic not near genes chr3L 9030494 intergenic not near genes chr3L 9030585 intergenic not near genes chr3L_19_9030001 chr3L_9030001 RAL-913 2123 chr3L 9036272 9036283 chr3L 9036384 9036419 4 124 28.5 26.5 27.5 0.1 147 chr3L 9036272 intergenic not near genes chr3L 9036346 intergenic not near genes chr3L 9036419 intergenic not near genes chr3L_4_9035001 chr3L_9035001 RAL-913 2124 chr3L 9047045 9047108 chr3L 9047182 9047245 17 137 0.0 6.5 3.2 4.0 200 chr3L 9047045 intergenic CG5144 + chr3L 9047145 intergenic CG5144 + chr3L 9047245 intergenic CG5144 + chr3L_17_9045001 chr3L_9045001 RAL-913 2125 chr3L 9056562 9056618 chr3L 9056692 9056727 8 126 17.0 8.0 12.5 0.6 165 chr3L 9056562 intron Argk - chr3L 9056644 intron Argk - chr3L 9056727 intron Argk - chr3L_8_9055001 chr3L_9055001 RAL-913 2126 chr3L 9058773 9058831 chr3L 9058931 9058989 14 158 12.5 20.0 16.2 0.8 216 chr3L 9058773 intron Argk - chr3L 9058881 intron Argk - chr3L 9058989 intron Argk - chr3L_14_9055001 chr3L_9055001 RAL-913 2127 chr3L 9076880 9076946 chr3L 9084490 9084556 412 21 7606 10.5 10.0 10.2 1.9 7676 chr3L 9076880 exon Tequila + chr3L 9080718 intron Tequila + chr3L 9084556 exon Tequila + chr3L_21_9080001 chr3L_9080001 RAL-913 2128 chr3L 9111117 9111172 chr3L 9111231 9111298 11 119 15.0 16.0 15.5 0.7 181 chr3L 9111117 intron bol - chr3L 9111208 intron bol - chr3L 9111298 intron bol - chr3L_11_9110001 chr3L_9110001 RAL-913 2129 chr3L 9115195 9115272 chr3L 9115326 9115405 21 129 17.0 17.0 17.0 1.2 210 chr3L 9115195 intron bol - chr3L 9115300 intron bol - chr3L 9115405 intron bol - chr3L_21_9115001 chr3L_9115001 RAL-913 2130 chr3L 9125747 9125781 chr3L 9125874 9125908 12 127 10.5 8.0 9.2 1.2 161 chr3L 9125747 intron bol - chr3L 9125828 intron bol - chr3L 9125908 intron bol - chr3L_12_9125001 chr3L_9125001 RAL-913 2131 chr3L 9129159 9129216 chr3L 9129289 9129346 19 130 19.0 18.5 18.8 1.0 187 chr3L 9129159 intron bol - chr3L 9129252 intron bol - chr3L 9129346 intron bol - chr3L_19_9125001 chr3L_9125001 RAL-913 2132 chr3L 9130518 9130566 chr3L 9134320 9134374 412 14 3807 10.0 6.0 8.0 1.6 3856 chr3L 9130518 intergenic bol - chr3L 9132446 intergenic not near genes chr3L 9134374 intergenic Dhpr + chr3L_14_9130001 chr3L_9130001 RAL-913 2133 chr3L 9164656 9164686 chr3L 9166173 9166188 hobo 16 1516 11.5 0.0 5.8 2.4 1532 chr3L 9164656 intron Rdl - chr3L 9165422 intron Rdl - chr3L 9166188 intron Rdl - chr3L_16_9165001 chr3L_9165001 RAL-913 2134 chr3L 9194100 9194155 chr3L 9194265 9194320 11 165 22.0 21.0 21.5 0.5 220 chr3L 9194100 intergenic not near genes chr3L 9194210 intergenic not near genes chr3L 9194320 intergenic not near genes chr3L_11_9190001 chr3L_9190001 RAL-913 2135 chr3L 9219201 9219269 chr3L 9219915 9219991 jockey 22 714 10.0 9.0 9.5 2.1 790 chr3L 9219201 intergenic not near genes chr3L 9219596 intergenic not near genes chr3L 9219991 intergenic not near genes chr3L_22_9215001 chr3L_9215001 RAL-913 2136 chr3L 9237527 9237540 chr3L 9237663 9237676 4 136 10.0 13.0 11.5 0.3 149 chr3L 9237527 intergenic not near genes chr3L 9237602 intergenic not near genes chr3L 9237676 intergenic not near genes chr3L_4_9235001 chr3L_9235001 RAL-913 2137 chr3L 9241083 9241152 chr3L 9241213 9241223 16 126 21.5 19.5 20.5 0.7 140 chr3L 9241083 intergenic not near genes chr3L 9241153 intergenic not near genes chr3L 9241223 intergenic not near genes chr3L_16_9240001 chr3L_9240001 RAL-913 2138 chr3L 9270570 9270649 chr3L 9278375 9278402 roo 24 7793 8.5 7.0 7.8 2.7 7832 chr3L 9270570 intron GluRIB + chr3L 9274486 intron GluRIB + chr3L 9278402 exon GluRIB + chr3L_24_9270001 chr3L_9270001 RAL-913 2139 chr3L 9289213 9289273 chr3L 9289345 9289370 11 128 32.5 25.5 29.0 0.4 157 chr3L 9289213 intergenic not near genes chr3L 9289292 intergenic not near genes chr3L 9289370 intergenic not near genes chr3L_11_9285001 chr3L_9285001 RAL-913 2140 chr3L 9295870 9295917 chr3L 9296029 9296076 6 158 27.5 26.0 26.8 0.2 206 chr3L 9295870 intergenic not near genes chr3L 9295973 intergenic not near genes chr3L 9296076 intergenic not near genes chr3L_6_9295001 chr3L_9295001 RAL-913 2141 chr3L 9302438 9302477 chr3L 9302573 9302612 11 135 11.5 0.0 5.8 1.6 174 chr3L 9302438 intergenic not near genes chr3L 9302525 intergenic not near genes chr3L 9302612 intergenic not near genes chr3L_11_9300001 chr3L_9300001 RAL-913 2142 chr3L 9307796 9307796 chr3L 22908066 22908067 5 13600270 39.0 43.5 41.2 0.1 13600271 chr3L 9307796 intergenic not near genes chr3L 16107932 intron Zn72D - chr3L 22908067 intergenic not near genes chr3L_5_16105001 chr3L_16105001 RAL-913 2143 chr3L 9312681 9312729 chr3L 9312809 9312857 13 125 24.0 16.0 20.0 0.6 176 chr3L 9312681 intergenic not near genes chr3L 9312769 intergenic not near genes chr3L 9312857 intergenic not near genes chr3L_13_9310001 chr3L_9310001 RAL-913 2144 chr3L 9316619 9316686 chr3L 9316750 9316817 14 131 23.0 28.5 25.8 0.5 198 chr3L 9316619 intergenic not near genes chr3L 9316718 intergenic not near genes chr3L 9316817 intergenic not near genes chr3L_14_9315001 chr3L_9315001 RAL-913 2145 chr3L 9348417 9348439 chr3L 9348969 9348991 7 551 23.0 0.0 11.5 0.6 574 chr3L 9348417 intergenic PGRP-LC + chr3L 9348704 intergenic PGRP-LC + chr3L 9348991 intergenic not near genes chr3L_7_9345001 chr3L_9345001 RAL-913 2146 chr3L 9348443 9348459 chr3L 9348968 9349011 9 544 15.0 0.0 7.5 1.1 568 chr3L 9348443 intergenic PGRP-LC + chr3L 9348727 intergenic PGRP-LC + chr3L 9349011 intergenic not near genes chr3L_9_9345001 chr3L_9345001 RAL-913 2147 chr3L 9369296 9369334 chr3L 9369459 9369500 6 166 25.5 22.5 24.0 0.2 204 chr3L 9369296 3` UTR CG4452 + chr3L 9369398 intron CG4452 + chr3L 9369500 intron CG4452 + chr3L_6_9365001 chr3L_9365001 RAL-913 2148 chr3L 9390799 9390869 chr3L 9390979 9391049 17 179 17.0 18.5 17.8 0.9 250 chr3L 9390799 intron CG4080 - chr3L 9390924 intron CG4080 - chr3L 9391049 intron CG4080 - chr3L_17_9390001 chr3L_9390001 RAL-913 2149 chr3L 9392237 9392297 chr3L 9392363 9392406 11 123 25.0 27.0 26.0 0.4 169 chr3L 9392237 intron CG4080 - chr3L 9392322 intron CG4080 - chr3L 9392406 intron CG4080 - chr3L_11_9390001 chr3L_9390001 RAL-913 2150 chr3L 9419861 9419924 chr3L 9419976 9420052 10 118 14.0 14.0 14.0 0.7 191 chr3L 9419861 intron CG3967 - chr3L 9419956 intron CG3967 - chr3L 9420052 intron CG3967 - chr3L_10_9415001 chr3L_9415001 RAL-913 2151 chr3L 9429470 9429516 chr3L 9429609 9429660 4 143 21.0 24.0 22.5 0.2 190 chr3L 9429470 intron,3` UTR RpS17 -,snoRNA:Psi28S-612 - chr3L 9429565 intron RpS17 - chr3L 9429660 intron RpS17 - chr3L_4_9425001 chr3L_9425001 RAL-913 2152 chr3L 9443490 9443532 chr3L 9445327 9445369 S-element 22 1837 13.5 17.0 15.2 1.4 1879 chr3L 9443490 intron CG33926 + chr3L 9444430 intron CG33926 + chr3L 9445369 intron CG33926 + chr3L_22_9440001 chr3L_9440001 RAL-913 2153 chr3L 9501670 9501725 chr3L 9502206 9502260 roo 30 536 12.5 13.5 13.0 2.1 590 chr3L 9501670 intron path - chr3L 9501965 intron path - chr3L 9502260 intron path - chr3L_30_9500001 chr3L_9500001 RAL-913 2154 chr3L 9502562 9502626 chr3L 9502697 9502761 35 133 8.5 12.5 10.5 3.0 199 chr3L 9502562 intron path - chr3L 9502662 intron path - chr3L 9502761 intron path - chr3L_35_9500001 chr3L_9500001 RAL-913 2155 chr3L 9503413 9503459 chr3L 9503552 9503598 17 139 10.0 19.0 14.5 1.1 185 chr3L 9503413 intron path - chr3L 9503506 intron path - chr3L 9503598 intron path - chr3L_17_9500001 chr3L_9500001 RAL-913 2156 chr3L 9506671 9506700 chr3L 9506805 9506834 9 134 24.5 26.0 25.2 0.3 163 chr3L 9506671 intergenic CG3408 - chr3L 9506752 intergenic CG3408 - chr3L 9506834 3` UTR CG3408 - chr3L_9_9505001 chr3L_9505001 RAL-913 2157 chr3L 9510860 9510954 chr3L 9511003 9511083 15 136 18.5 20.0 19.2 0.7 223 chr3L 9510860 intron RpS9 - chr3L 9510972 intron RpS9 - chr3L 9511083 exon RpS9 - chr3L_15_9510001 chr3L_9510001 RAL-913 2158 chr3L 9526474 9526519 chr3L 9528189 9528234 Doc 5 1715 1.0 7.0 4.0 1.0 1760 chr3L 9526474 intergenic not near genes chr3L 9527354 intergenic not near genes chr3L 9528234 intergenic not near genes chr3L_5_9525001 chr3L_9525001 RAL-913 2159 chr3L 9533718 9533750 chr3L 9541316 9541336 412 9 7606 17.5 10.0 13.8 0.6 7618 chr3L 9533718 intergenic not near genes chr3L 9537527 intergenic not near genes chr3L 9541336 intergenic not near genes chr3L_9_9535001 chr3L_9535001 RAL-913 2160 chr3L 9533752 9533777 chr3L 9541315 9541371 412 11 7590 10.0 10.0 10.0 1.0 7619 chr3L 9533752 intergenic not near genes chr3L 9537562 intergenic not near genes chr3L 9541371 intergenic not near genes chr3L_11_9535001 chr3L_9535001 RAL-913 2161 chr3L 9555930 9555953 chr3L 9556058 9556081 10 128 20.5 25.0 22.8 0.4 151 chr3L 9555930 intron CG42673 + chr3L 9556006 intron CG42673 + chr3L 9556081 intron CG42673 + chr3L_10_9555001 chr3L_9555001 RAL-913 2162 chr3L 9568657 9568679 chr3L 9568795 9568817 5 138 31.5 20.0 25.8 0.2 160 chr3L 9568657 intron CG42673 + chr3L 9568737 intron CG42673 + chr3L 9568817 intron CG42673 + chr3L_5_9565001 chr3L_9565001 RAL-913 2163 chr3L 9571882 9571925 chr3L 9572269 9572323 jockey 28 398 10.5 14.5 12.5 2.1 441 chr3L 9571882 intron CG42673 + chr3L 9572102 intron CG42673 + chr3L 9572323 intron CG42673 + chr3L_28_9570001 chr3L_9570001 RAL-913 2164 chr3L 9575885 9575934 chr3L 9581000 9581036 jockey 19 5125 4.5 11.5 8.0 2.1 5151 chr3L 9575885 intron CG42673 + chr3L 9578460 intron CG42673 + chr3L 9581036 intron CG42673 + chr3L_19_9575001 chr3L_9575001 RAL-913 2165 chr3L 9638985 9639044 chr3L 9639124 9639179 4 136 10.5 25.5 18.0 0.2 194 chr3L 9638985 intron,3` UTR fry -,CG8329 + chr3L 9639082 intron fry - chr3L 9639179 intron fry - chr3L_4_9635001 chr3L_9635001 RAL-913 2166 chr3L 9646431 9646469 chr3L 9646606 9646644 7 171 24.5 15.0 19.8 0.3 213 chr3L 9646431 intron,intron fry -,CG33696 + chr3L 9646538 intron,intron fry -,CG33696 + chr3L 9646644 intron,intron fry -,CG33696 + chr3L_7_9645001 chr3L_9645001 RAL-913 2167 chr3L 9646768 9646815 chr3L 9646916 9646963 18 147 21.5 15.5 18.5 0.9 195 chr3L 9646768 intron,intron fry -,CG33696 + chr3L 9646866 intron,intron fry -,CG33696 + chr3L 9646963 intron,intron fry -,CG33696 + chr3L_18_9645001 chr3L_9645001 RAL-913 2168 chr3L 9672707 9672758 chr3L 9672846 9672897 10 139 29.0 29.0 29.0 0.3 190 chr3L 9672707 intron fry - chr3L 9672802 intron fry - chr3L 9672897 intron fry - chr3L_10_9670001 chr3L_9670001 RAL-913 2169 chr3L 9689580 9689643 chr3L 9689772 9689835 17 192 26.5 23.5 25.0 0.7 255 chr3L 9689580 intron CG6767 - chr3L 9689708 intron CG6767 - chr3L 9689835 intron CG6767 - chr3L_17_9685001 chr3L_9685001 RAL-913 2170 chr3L 9715544 9715576 chr3L 9715720 9715752 7 176 27.5 22.0 24.8 0.3 208 chr3L 9715544 intron vsg + chr3L 9715648 intron vsg + chr3L 9715752 exon vsg + chr3L_7_9715001 chr3L_9715001 RAL-913 2171 chr3L 9715578 9715601 chr3L 9715718 9715777 5 165 26.0 22.0 24.0 0.2 199 chr3L 9715578 intron vsg + chr3L 9715678 intron vsg + chr3L 9715777 exon vsg + chr3L_5_9715001 chr3L_9715001 RAL-913 2172 chr3L 9738572 9738636 chr3L 9738825 9738889 7 250 24.5 32.5 28.5 0.2 317 chr3L 9738572 intron CG42268 - chr3L 9738730 intron CG42268 - chr3L 9738889 intron CG42268 - chr3L_7_9735001 chr3L_9735001 RAL-913 2173 chr3L 9750604 9750643 chr3L 9750731 9750770 11 127 22.0 11.0 16.5 0.6 166 chr3L 9750604 intron CG42268 - chr3L 9750687 intron CG42268 - chr3L 9750770 intron CG42268 - chr3L_11_9750001 chr3L_9750001 RAL-913 2174 chr3L 9775071 9775139 chr3L 9775202 9775270 14 130 33.5 38.0 35.8 0.4 199 chr3L 9775071 intron CG8177 + chr3L 9775170 intron CG8177 + chr3L 9775270 intron CG8177 + chr3L_14_9775001 chr3L_9775001 RAL-913 2175 chr3L 9775320 9775395 chr3L 9775729 9775805 16 409 17.5 15.5 16.5 0.9 485 chr3L 9775320 intron CG8177 + chr3L 9775562 intron CG8177 + chr3L 9775805 intron CG8177 + chr3L_16_9775001 chr3L_9775001 RAL-913 2176 chr3L 9796033 9796104 chr3L 9796172 9796240 13 137 21.0 25.5 23.2 0.5 207 chr3L 9796033 intron Zasp67 - chr3L 9796136 intron Zasp67 - chr3L 9796240 intron Zasp67 - chr3L_13_9795001 chr3L_9795001 RAL-913 2177 chr3L 9817581 9817660 chr3L 9817711 9817790 14 130 20.0 22.0 21.0 0.6 209 chr3L 9817581 intron CG43897 + chr3L 9817686 intron CG43897 + chr3L 9817790 intron CG43897 + chr3L_14_9815001 chr3L_9815001 RAL-913 2178 chr3L 9824102 9824171 chr3L 9824231 9824308 11 132 24.5 21.0 22.8 0.5 206 chr3L 9824102 intron CG43897 + chr3L 9824205 intron CG43897 + chr3L 9824308 intron CG43897 + chr3L_11_9820001 chr3L_9820001 RAL-913 2179 chr3L 9907831 9907884 chr3L 9907958 9908011 10 122 19.5 24.0 21.8 0.4 180 chr3L 9907831 intergenic CG34356 + chr3L 9907921 intergenic CG34356 + chr3L 9908011 intergenic CG34356 + chr3L_10_9905001 chr3L_9905001 RAL-913 2180 chr3L 9918010 9918053 chr3L 9918150 9918193 11 140 37.5 32.5 35.0 0.3 183 chr3L 9918010 intron CG34356 + chr3L 9918102 intron CG34356 + chr3L 9918193 intron CG34356 + chr3L_11_9915001 chr3L_9915001 RAL-913 2181 chr3L 9918836 9918910 chr3L 9918981 9919055 18 144 17.5 22.0 19.8 0.9 219 chr3L 9918836 intron CG34356 + chr3L 9918946 intron CG34356 + chr3L 9919055 intron CG34356 + chr3L_18_9915001 chr3L_9915001 RAL-913 2182 chr3L 9929632 9929696 chr3L 9938462 9938526 roo 30 8829 13.5 11.0 12.2 2.3 8894 chr3L 9929632 intron CG34356 + chr3L 9934079 intron CG34356 + chr3L 9938526 intron CG34356 + chr3L_30_9930001 chr3L_9930001 RAL-913 2183 chr3L 9945641 9945777 chr3L 9945773 9945927 6 146 9.5 10.5 10.0 0.5 286 chr3L 9945641 intron CG34356 + chr3L 9945784 intron CG34356 + chr3L 9945927 exon CG34356 + chr3L_6_9945001 chr3L_9945001 RAL-913 2184 chr3L 9980221 9980255 chr3L 9980361 9980395 9 140 19.0 13.0 16.0 0.5 174 chr3L 9980221 intron dpr6 + chr3L 9980308 intron dpr6 + chr3L 9980395 intron dpr6 + chr3L_9_9980001 chr3L_9980001 RAL-913 2185 chr3L 9980259 9980293 chr3L 9980359 9980412 6 121 14.0 13.0 13.5 0.4 153 chr3L 9980259 intron dpr6 + chr3L 9980336 intron dpr6 + chr3L 9980412 intron dpr6 + chr3L_6_9980001 chr3L_9980001 RAL-913 2186 chr3L 10003112 10003172 chr3L 10003255 10003319 21 147 17.5 21.0 19.2 1.0 207 chr3L 10003112 intron dpr6 + chr3L 10003216 intron dpr6 + chr3L 10003319 intron dpr6 + chr3L_21_10000001 chr3L_10000001 RAL-913 2187 chr3L 10004051 10004113 chr3L 10004175 10004243 12 128 15.5 18.5 17.0 0.7 192 chr3L 10004051 exon dpr6 + chr3L 10004147 intron dpr6 + chr3L 10004243 intron dpr6 + chr3L_12_10000001 chr3L_10000001 RAL-913 2188 chr3L 10020838 10020906 chr3L 10020975 10021048 22 140 14.5 17.5 16.0 1.3 210 chr3L 10020838 intron dpr6 + chr3L 10020943 intron dpr6 + chr3L 10021048 intron dpr6 + chr3L_22_10020001 chr3L_10020001 RAL-913 2189 chr3L 10028284 10028334 chr3L 10028419 10028469 11 135 22.5 27.5 25.0 0.4 185 chr3L 10028284 intron dpr6 + chr3L 10028376 intron dpr6 + chr3L 10028469 intron dpr6 + chr3L_11_10025001 chr3L_10025001 RAL-913 2190 chr3L 10032497 10032561 chr3L 10032633 10032698 12 136 0.0 9.0 4.5 2.2 201 chr3L 10032497 intron dpr6 + chr3L 10032598 intron dpr6 + chr3L 10032698 intron dpr6 + chr3L_12_10030001 chr3L_10030001 RAL-913 2191 chr3L 10035299 10035323 chr3L 10035421 10035475 6 143 20.5 23.5 22.0 0.3 176 chr3L 10035299 intron dpr6 + chr3L 10035387 intron dpr6 + chr3L 10035475 intron dpr6 + chr3L_6_10035001 chr3L_10035001 RAL-913 2192 chr3L 10037448 10037522 chr3L 10037592 10037680 9 151 29.0 29.0 29.0 0.3 232 chr3L 10037448 exon dpr6 + chr3L 10037564 intron dpr6 + chr3L 10037680 intron dpr6 + chr3L_9_10035001 chr3L_10035001 RAL-913 2193 chr3L 10043824 10043888 chr3L 10043960 10044020 7 133 23.0 23.0 23.0 0.3 196 chr3L 10043824 intron dpr6 + chr3L 10043922 intron dpr6 + chr3L 10044020 intron dpr6 + chr3L_7_10040001 chr3L_10040001 RAL-913 2194 chr3L 10059792 10059851 chr3L 10059932 10059991 6 137 26.0 25.0 25.5 0.2 199 chr3L 10059792 intron dpr6 + chr3L 10059892 intron dpr6 + chr3L 10059991 intron dpr6 + chr3L_6_10055001 chr3L_10055001 RAL-913 2195 chr3L 10060087 10060117 chr3L 10067716 10067746 17.6 7 7629 31.5 29.0 30.2 0.2 7659 chr3L 10060087 intron dpr6 + chr3L 10063916 intron dpr6 + chr3L 10067746 intron dpr6 + chr3L_7_10060001 chr3L_10060001 RAL-913 2196 chr3L 10099058 10099113 chr3L 10099193 10099248 13 135 22.5 24.0 23.2 0.5 190 chr3L 10099058 intron dpr6 + chr3L 10099153 intron dpr6 + chr3L 10099248 intron dpr6 + chr3L_13_10095001 chr3L_10095001 RAL-913 2197 chr3L 10107764 10107818 chr3L 10107891 10107945 8 127 23.0 23.0 23.0 0.3 181 chr3L 10107764 intron dpr6 + chr3L 10107854 intron dpr6 + chr3L 10107945 intron dpr6 + chr3L_8_10105001 chr3L_10105001 RAL-913 2198 chr3L 10130240 10130247 chr3L 10130322 10130378 5 121 18.0 18.5 18.2 0.3 138 chr3L 10130240 intron dpr6 + chr3L 10130309 intron dpr6 + chr3L 10130378 intron dpr6 + chr3L_5_10130001 chr3L_10130001 RAL-913 2199 chr3L 10214762 10214812 chr3L 10214914 10214965 9 153 22.5 19.0 20.8 0.4 203 chr3L 10214762 intergenic not near genes chr3L 10214864 intergenic not near genes chr3L 10214965 intergenic not near genes chr3L_9_10210001 chr3L_10210001 RAL-913 2200 chr3L 10222693 10222768 chr3L 10222823 10222898 22 130 3.0 14.5 8.8 2.2 205 chr3L 10222693 intron scramb1 - chr3L 10222796 intron scramb1 - chr3L 10222898 intron scramb1 - chr3L_22_10220001 chr3L_10220001 RAL-913 2201 chr3L 10246051 10246067 chr3L 10246204 10246220 9 153 7.5 14.0 10.8 0.8 169 chr3L 10246051 intergenic not near genes chr3L 10246136 intergenic not near genes chr3L 10246220 intergenic not near genes chr3L_9_10245001 chr3L_10245001 RAL-913 2202 chr3L 10249109 10249130 chr3L 10249236 10249244 6 125 7.0 21.5 14.2 0.4 135 chr3L 10249109 intergenic not near genes chr3L 10249176 intergenic not near genes chr3L 10249244 intergenic not near genes chr3L_6_10245001 chr3L_10245001 RAL-913 2203 chr3L 10255367 10255406 chr3L 10255515 10255554 6 148 19.0 28.5 23.8 0.2 187 chr3L 10255367 intergenic not near genes chr3L 10255460 intergenic not near genes chr3L 10255554 intergenic not near genes chr3L_6_10255001 chr3L_10255001 RAL-913 2204 chr3L 10272203 10272263 chr3L 10272344 10272403 18 140 18.0 24.5 21.2 0.8 200 chr3L 10272203 intergenic not near genes chr3L 10272303 intergenic not near genes chr3L 10272403 intergenic not near genes chr3L_18_10270001 chr3L_10270001 RAL-913 2205 chr3L 10276311 10276362 chr3L 10276438 10276490 12 126 15.0 10.5 12.8 0.9 179 chr3L 10276311 intergenic not near genes chr3L 10276400 intergenic not near genes chr3L 10276490 intergenic not near genes chr3L_12_10275001 chr3L_10275001 RAL-913 2206 chr3L 10298633 10298691 chr3L 10298765 10298828 18 136 0.0 8.0 4.0 3.6 195 chr3L 10298633 intergenic not near genes chr3L 10298730 intergenic not near genes chr3L 10298828 intergenic not near genes chr3L_18_10295001 chr3L_10295001 RAL-913 2207 chr3L 10300048 10300076 chr3L 10300168 10300210 5 131 18.0 28.0 23.0 0.2 162 chr3L 10300048 intergenic not near genes chr3L 10300129 intergenic not near genes chr3L 10300210 intergenic not near genes chr3L_5_10300001 chr3L_10300001 RAL-913 2208 chr3L 10308702 10308764 chr3L 10308829 10308891 27 126 8.0 18.5 13.2 1.9 189 chr3L 10308702 intergenic not near genes chr3L 10308796 intergenic not near genes chr3L 10308891 intergenic not near genes chr3L_27_10305001 chr3L_10305001 RAL-913 2209 chr3L 10326262 10326289 chr3L 10326392 10326395 9 127 7.5 16.0 11.8 0.7 133 chr3L 10326262 intergenic CR45244 + chr3L 10326328 intergenic CR45244 + chr3L 10326395 intergenic CR45244 + chr3L_9_10325001 chr3L_10325001 RAL-913 2210 chr3L 10328066 10328129 chr3L 10328228 10328291 27 162 15.0 12.0 13.5 1.9 225 chr3L 10328066 intergenic not near genes chr3L 10328178 intergenic not near genes chr3L 10328291 intergenic not near genes chr3L_27_10325001 chr3L_10325001 RAL-913 2211 chr3L 10364487 10364555 chr3L 10364687 10364760 10 204 25.0 25.5 25.2 0.4 273 chr3L 10364487 5` UTR CR44327 + chr3L 10364624 5` UTR CR44327 + chr3L 10364760 5` UTR CR44327 + chr3L_10_10360001 chr3L_10360001 RAL-913 2212 chr3L 10367475 10367505 chr3L 10367626 10367656 7 149 5.5 22.0 13.8 0.5 181 chr3L 10367475 intergenic CR44327 + chr3L 10367566 intergenic CR44327 + chr3L 10367656 intergenic CR44327 + chr3L_7_10365001 chr3L_10365001 RAL-913 2213 chr3L 10371222 10371277 chr3L 10371499 10371563 12 284 21.5 25.5 23.5 0.5 341 chr3L 10371222 intergenic not near genes chr3L 10371392 intergenic not near genes chr3L 10371563 intergenic not near genes chr3L_12_10370001 chr3L_10370001 RAL-913 2214 chr3L 10374909 10374979 chr3L 10375036 10375106 14 127 22.0 27.5 24.8 0.5 197 chr3L 10374909 intergenic not near genes chr3L 10375008 intergenic not near genes chr3L 10375106 intergenic not near genes chr3L_14_10375001 chr3L_10375001 RAL-913 2215 chr3L 10386351 10386418 chr3L 10386468 10386545 17 123 10.5 9.5 10.0 1.5 194 chr3L 10386351 intergenic CR45245 + chr3L 10386448 intergenic CR45245 + chr3L 10386545 5` UTR CR45245 + chr3L_17_10385001 chr3L_10385001 RAL-913 2216 chr3L 10399481 10399551 chr3L 10399630 10399700 11 143 21.0 20.5 20.8 0.5 219 chr3L 10399481 intergenic not near genes chr3L 10399590 intergenic not near genes chr3L 10399700 intergenic not near genes chr3L_11_10395001 chr3L_10395001 RAL-913 2217 chr3L 10414897 10414965 chr3L 10417317 10417387 Doc 28 2422 9.5 8.0 8.8 2.9 2490 chr3L 10414897 intergenic CG12362 + chr3L 10416142 intergenic not near genes chr3L 10417387 intergenic not near genes chr3L_28_10415001 chr3L_10415001 RAL-913 2218 chr3L 10417530 10417603 chr3L 10417657 10417706 34 119 9.0 13.5 11.2 2.8 176 chr3L 10417530 intergenic not near genes chr3L 10417618 intergenic not near genes chr3L 10417706 intergenic not near genes chr3L_34_10415001 chr3L_10415001 RAL-913 2219 chr3L 10420430 10420507 chr3L 10420612 10420688 15 181 28.0 20.0 24.0 0.6 258 chr3L 10420430 intergenic not near genes chr3L 10420559 intergenic not near genes chr3L 10420688 intergenic not near genes chr3L_15_10420001 chr3L_10420001 RAL-913 2220 chr3L 10450631 10450711 chr3L 10450778 10450841 14 131 0.0 13.5 6.8 1.8 210 chr3L 10450631 intergenic not near genes chr3L 10450736 intergenic not near genes chr3L 10450841 intergenic not near genes chr3L_14_10450001 chr3L_10450001 RAL-913 2221 chr3L 10459051 10459080 chr3L 10459179 10459208 6 127 21.0 23.5 22.2 0.3 157 chr3L 10459051 intergenic Gem3 - chr3L 10459130 3` UTR Gem3 - chr3L 10459208 3` UTR Gem3 - chr3L_6_10455001 chr3L_10455001 RAL-913 2222 chr3L 10508980 10509001 chr3L 10509092 10509134 6 122 18.5 17.5 18.0 0.3 154 chr3L 10508980 intron A2bp1 + chr3L 10509057 intron A2bp1 + chr3L 10509134 intron A2bp1 + chr3L_6_10505001 chr3L_10505001 RAL-913 2223 chr3L 10532700 10532768 chr3L 10532829 10532897 21 129 9.0 5.5 7.2 2.6 197 chr3L 10532700 intron A2bp1 + chr3L 10532798 intron A2bp1 + chr3L 10532897 intron A2bp1 + chr3L_21_10530001 chr3L_10530001 RAL-913 2224 chr3L 10537170 10537240 chr3L 10537305 10537375 10 135 23.0 28.0 25.5 0.4 205 chr3L 10537170 intron A2bp1 + chr3L 10537272 intron A2bp1 + chr3L 10537375 intron A2bp1 + chr3L_10_10535001 chr3L_10535001 RAL-913 2225 chr3L 10538885 10538900 chr3L 10539020 10539035 5 135 32.0 32.5 32.2 0.2 150 chr3L 10538885 intron A2bp1 + chr3L 10538960 intron A2bp1 + chr3L 10539035 intron A2bp1 + chr3L_5_10535001 chr3L_10535001 RAL-913 2226 chr3L 10567471 10567530 chr3L 10567600 10567659 13 129 24.0 26.5 25.2 0.5 188 chr3L 10567471 intron A2bp1 + chr3L 10567565 intron A2bp1 + chr3L 10567659 intron A2bp1 + chr3L_13_10565001 chr3L_10565001 RAL-913 2227 chr3L 10598780 10598793 chr3L 10598907 10598920 4 127 20.5 13.0 16.8 0.2 140 chr3L 10598780 intergenic not near genes chr3L 10598850 intergenic not near genes chr3L 10598920 intergenic not near genes chr3L_4_10595001 chr3L_10595001 RAL-913 2228 chr3L 10600406 10600485 chr3L 10600538 10600620 21 132 12.5 7.5 10.0 1.9 214 chr3L 10600406 intergenic not near genes chr3L 10600513 intergenic not near genes chr3L 10600620 intergenic not near genes chr3L_21_10600001 chr3L_10600001 RAL-913 2229 chr3L 10602725 10602774 chr3L 10603080 10603109 4 348 21.0 17.5 19.2 0.2 384 chr3L 10602725 intergenic not near genes chr3L 10602917 intergenic not near genes chr3L 10603109 intergenic not near genes chr3L_4_10600001 chr3L_10600001 RAL-913 2230 chr3L 10614743 10614795 chr3L 10614880 10614924 6 132 0.0 13.5 6.8 0.8 181 chr3L 10614743 intergenic not near genes chr3L 10614834 intergenic not near genes chr3L 10614924 intergenic not near genes chr3L_6_10610001 chr3L_10610001 RAL-913 2231 chr3L 10621680 10621880 chr3L 10621817 10621982 13 134 20.5 10.5 15.5 0.8 302 chr3L 10621680 intergenic not near genes chr3L 10621831 intergenic not near genes chr3L 10621982 intergenic not near genes chr3L_13_10620001 chr3L_10620001 RAL-913 2232 chr3L 10627393 10627410 chr3L 10627526 10627543 9 133 8.5 3.5 6.0 1.3 150 chr3L 10627393 3` UTR CG34238 + chr3L 10627468 intergenic CG34238 +,CG14151 - chr3L 10627543 intergenic CG34238 +,CG14151 - chr3L_9_10625001 chr3L_10625001 RAL-913 2233 chr3L 10645495 10645566 chr3L 10645674 10645749 16 181 26.5 24.0 25.2 0.6 254 chr3L 10645495 intron CG32066 - chr3L 10645622 intron CG32066 - chr3L 10645749 intron CG32066 - chr3L_16_10645001 chr3L_10645001 RAL-913 2234 chr3L 10658068 10658208 chr3L 10658195 10658385 15 166 18.0 19.5 18.8 0.8 317 chr3L 10658068 intron CG32066 - chr3L 10658226 intron CG32066 - chr3L 10658385 intron CG32066 - chr3L_15_10655001 chr3L_10655001 RAL-913 2235 chr3L 10674107 10674154 chr3L 10674205 10674293 7 127 18.5 19.5 19.0 0.3 186 chr3L 10674107 intron simj + chr3L 10674200 intron simj + chr3L 10674293 intron simj + chr3L_7_10670001 chr3L_10670001 RAL-913 2236 chr3L 10703655 10703686 chr3L 10703788 10703819 12 133 28.5 16.0 22.2 0.5 164 chr3L 10703655 intergenic not near genes chr3L 10703737 intergenic not near genes chr3L 10703819 intergenic not near genes chr3L_12_10700001 chr3L_10700001 RAL-913 2237 chr3L 10708773 10708826 chr3L 10708928 10708981 11 155 19.5 25.0 22.2 0.5 208 chr3L 10708773 intergenic not near genes chr3L 10708877 intergenic not near genes chr3L 10708981 intergenic not near genes chr3L_11_10705001 chr3L_10705001 RAL-913 2238 chr3L 10721395 10721419 chr3L 10721548 10721572 11 153 20.0 20.0 20.0 0.5 177 chr3L 10721395 intergenic not near genes chr3L 10721484 intergenic not near genes chr3L 10721572 intergenic not near genes chr3L_11_10720001 chr3L_10720001 RAL-913 2239 chr3L 10721947 10721986 chr3L 10722079 10722080 8 126 13.5 1.5 7.5 0.9 133 chr3L 10721947 intergenic not near genes chr3L 10722014 intergenic not near genes chr3L 10722080 intergenic not near genes chr3L_8_10720001 chr3L_10720001 RAL-913 2240 chr3L 10735774 10735830 chr3L 10735926 10735969 13 147 2.0 8.5 5.2 2.1 195 chr3L 10735774 intergenic not near genes chr3L 10735872 intergenic not near genes chr3L 10735969 intergenic not near genes chr3L_13_10735001 chr3L_10735001 RAL-913 2241 chr3L 10739761 10739807 chr3L 10739895 10739905 8 128 2.5 0.0 1.2 3.6 144 chr3L 10739761 intergenic not near genes chr3L 10739833 intergenic not near genes chr3L 10739905 intergenic not near genes chr3L_8_10735001 chr3L_10735001 RAL-913 2242 chr3L 10745495 10745555 chr3L 10745625 10745685 19 130 22.5 21.0 21.8 0.8 190 chr3L 10745495 intergenic not near genes chr3L 10745590 intergenic not near genes chr3L 10745685 intergenic not near genes chr3L_19_10745001 chr3L_10745001 RAL-913 2243 chr3L 10762802 10762852 chr3L 10762916 10762956 13 121 16.5 15.0 15.8 0.8 154 chr3L 10762802 intergenic not near genes chr3L 10762879 intergenic not near genes chr3L 10762956 intergenic not near genes chr3L_13_10760001 chr3L_10760001 RAL-913 2244 chr3L 10770454 10770484 chr3L 10770585 10770615 10 131 9.0 0.0 4.5 1.8 161 chr3L 10770454 intergenic not near genes chr3L 10770534 intergenic not near genes chr3L 10770615 intergenic not near genes chr3L_10_10770001 chr3L_10770001 RAL-913 2245 chr3L 10815633 10815679 chr3L 10815908 10815954 11 273 3.0 14.5 8.8 1.1 321 chr3L 10815633 3` UTR CG42831 + chr3L 10815794 3` UTR CG42831 + chr3L 10815954 3` UTR CG42831 + chr3L_11_10815001 chr3L_10815001 RAL-913 2246 chr3L 10820475 10820523 chr3L 10820674 10820689 6 194 1.5 2.5 2.0 2.0 214 chr3L 10820475 intergenic not near genes chr3L 10820582 intergenic not near genes chr3L 10820689 intergenic not near genes chr3L_6_10820001 chr3L_10820001 RAL-913 2247 chr3L 10844354 10844372 chr3L 10844483 10844501 11 129 6.0 11.0 8.5 1.2 147 chr3L 10844354 intergenic not near genes chr3L 10844428 intergenic not near genes chr3L 10844501 intergenic not near genes chr3L_11_10840001 chr3L_10840001 RAL-913 2248 chr3L 10866694 10866993 chr3L 10867061 10867141 26 242 5.5 7.0 6.2 3.6 447 chr3L 10866694 intron tna + chr3L 10866918 intron tna + chr3L 10867141 intron tna + chr3L_26_10865001 chr3L_10865001 RAL-913 2249 chr3L 10883844 10883908 chr3L 10883979 10884043 13 134 30.5 33.0 31.8 0.4 199 chr3L 10883844 intergenic CG7949 +,CG6404 - chr3L 10883944 intergenic CG6404 -,CG7949 + chr3L 10884043 intergenic CG6404 -,CG7949 + chr3L_13_10880001 chr3L_10880001 RAL-913 2250 chr3L 10902658 10902682 chr3L 10902813 10902837 7 155 11.0 8.5 9.8 0.6 179 chr3L 10902658 intergenic not near genes chr3L 10902748 intergenic not near genes chr3L 10902837 intergenic not near genes chr3L_7_10900001 chr3L_10900001 RAL-913 2251 chr3L 10904324 10904400 chr3L 10904520 10904596 18 195 6.5 15.0 10.8 1.5 272 chr3L 10904324 intergenic not near genes chr3L 10904460 intergenic not near genes chr3L 10904596 intergenic not near genes chr3L_18_10900001 chr3L_10900001 RAL-913 2252 chr3L 10907925 10907994 chr3L 10908051 10908120 12 126 3.5 4.0 3.8 2.5 195 chr3L 10907925 intergenic not near genes chr3L 10908022 intergenic not near genes chr3L 10908120 intergenic not near genes chr3L_12_10905001 chr3L_10905001 RAL-913 2253 chr3L 10912505 10912534 chr3L 10912638 10912667 5 133 17.5 19.5 18.5 0.3 162 chr3L 10912505 intergenic not near genes chr3L 10912586 intergenic not near genes chr3L 10912667 intergenic not near genes chr3L_5_10910001 chr3L_10910001 RAL-913 2254 chr3L 10928855 10928875 chr3L 10929004 10929024 9 149 0.0 10.5 5.2 1.5 169 chr3L 10928855 intergenic not near genes chr3L 10928940 intergenic not near genes chr3L 10929024 intergenic not near genes chr3L_9_10925001 chr3L_10925001 RAL-913 2255 chr3L 10935208 10935254 chr3L 10935351 10935404 7 145 8.5 10.0 9.2 0.7 196 chr3L 10935208 intergenic not near genes chr3L 10935306 intergenic not near genes chr3L 10935404 intergenic not near genes chr3L_7_10935001 chr3L_10935001 RAL-913 2256 chr3L 10937802 10937876 chr3L 10937927 10938003 16 126 19.5 23.5 21.5 0.7 201 chr3L 10937802 intergenic not near genes chr3L 10937902 intergenic not near genes chr3L 10938003 intergenic not near genes chr3L_16_10935001 chr3L_10935001 RAL-913 2257 chr3L 10942013 10942072 chr3L 10942142 10942171 14 119 12.5 8.0 10.2 1.2 158 chr3L 10942013 intergenic not near genes chr3L 10942092 intergenic not near genes chr3L 10942171 intergenic not near genes chr3L_14_10940001 chr3L_10940001 RAL-913 2258 chr3L 10947108 10947148 chr3L 10947212 10947254 7 110 22.5 28.5 25.5 0.3 146 chr3L 10947108 intergenic not near genes chr3L 10947181 intergenic not near genes chr3L 10947254 intergenic not near genes chr3L_7_10945001 chr3L_10945001 RAL-913 2259 chr3L 10951251 10951294 chr3L 10951377 10951420 9 126 0.0 3.5 1.8 3.2 169 chr3L 10951251 intergenic not near genes chr3L 10951336 intergenic not near genes chr3L 10951420 intergenic not near genes chr3L_9_10950001 chr3L_10950001 RAL-913 2260 chr3L 10956359 10956466 chr3L 10956501 10956622 14 150 7.5 7.5 7.5 1.6 263 chr3L 10956359 intergenic not near genes chr3L 10956490 intergenic not near genes chr3L 10956622 intergenic not near genes chr3L_14_10955001 chr3L_10955001 RAL-913 2261 chr3L 10968692 10968716 chr3L 10968825 10968849 7 133 9.0 0.0 4.5 1.3 157 chr3L 10968692 intergenic not near genes chr3L 10968770 intergenic not near genes chr3L 10968849 intergenic not near genes chr3L_7_10965001 chr3L_10965001 RAL-913 2262 chr3L 11029358 11029389 chr3L 11029493 11029524 5 135 29.5 23.5 26.5 0.2 166 chr3L 11029358 3` UTR CG32081 + chr3L 11029441 3` UTR CG32081 + chr3L 11029524 intergenic CG32081 + chr3L_5_11025001 chr3L_11025001 RAL-913 2263 chr3L 11042072 11042171 chr3L 11042261 11042374 11 192 7.5 0.0 3.8 2.3 302 chr3L 11042072 intron CG43693 - chr3L 11042223 intron CG43693 - chr3L 11042374 intron CG43693 - chr3L_11_11040001 chr3L_11040001 RAL-913 2264 chr3L 11047291 11047367 chr3L 11047425 11047501 17 133 9.0 5.5 7.2 2.1 210 chr3L 11047291 intron CG43693 - chr3L 11047396 intron CG43693 - chr3L 11047501 intron CG43693 - chr3L_17_11045001 chr3L_11045001 RAL-913 2265 chr3L 11053632 11053646 chr3L 11053772 11053786 9 140 4.5 0.0 2.2 2.8 154 chr3L 11053632 intergenic CG7888 + chr3L 11053709 intergenic CG7888 + chr3L 11053786 intergenic CG7888 + chr3L_9_11050001 chr3L_11050001 RAL-913 2266 chr3L 11054165 11054201 chr3L 11054293 11054329 12 127 6.0 10.0 8.0 1.3 164 chr3L 11054165 5` UTR CG7888 + chr3L 11054247 5` UTR CG7888 + chr3L 11054329 5` UTR CG7888 + chr3L_12_11050001 chr3L_11050001 RAL-913 2267 chr3L 11083467 11083525 chr3L 11083615 11083673 13 148 24.5 30.5 27.5 0.5 206 chr3L 11083467 exon JIL-1 - chr3L 11083570 intron JIL-1 - chr3L 11083673 intron JIL-1 - chr3L_13_11080001 chr3L_11080001 RAL-913 2268 chr3L 11087014 11087084 chr3L 11088852 11088923 S-element 29 1837 8.5 6.5 7.5 3.4 1909 chr3L 11087014 intron JIL-1 - chr3L 11087968 intron JIL-1 - chr3L 11088923 intron JIL-1 - chr3L_29_11085001 chr3L_11085001 RAL-913 2269 chr3L 11104027 11104106 chr3L 11104156 11104237 14 131 7.5 0.0 3.8 2.9 210 chr3L 11104027 intergenic CG32071 - chr3L 11104132 intergenic CG32071 - chr3L 11104237 intergenic CG32071 - chr3L_14_11100001 chr3L_11100001 RAL-913 2270 chr3L 11105248 11105318 chr3L 11107009 11107067 X-element 34 1760 10.0 12.5 11.2 2.8 1819 chr3L 11105248 intergenic not near genes chr3L 11106158 intergenic not near genes chr3L 11107067 exon CG32073 - chr3L_34_11105001 chr3L_11105001 RAL-913 2271 chr3L 11103810 11103878 chr3L 11107583 11107651 X-element 15 3773 51.5 52.5 52.0 0.3 3841 chr3L 11103810 exon CG32071 - chr3L 11105730 intergenic not near genes chr3L 11107651 intergenic CG32073 - chr3L_15_11105001 chr3L_11105001 RAL-913 2272 chr3L 11135479 11135777 chr3L 11135759 11135912 15 212 16.0 19.5 17.8 0.8 433 chr3L 11135479 3` UTR CG14143 + chr3L 11135696 intergenic CG14143 +,CG32082 + chr3L 11135912 intergenic CG32082 +,CG14143 + chr3L_15_11135001 chr3L_11135001 RAL-913 2273 chr3L 11194287 11194326 chr3L 11194456 11194495 5 169 27.0 27.5 27.2 0.2 208 chr3L 11194287 intron GlcAT-P - chr3L 11194391 intron GlcAT-P - chr3L 11194495 intron GlcAT-P - chr3L_5_11190001 chr3L_11190001 RAL-913 2274 chr3L 11217466 11217506 chr3L 11217599 11217639 6 133 31.5 27.0 29.2 0.2 173 chr3L 11217466 intron CG42671 + chr3L 11217552 intron CG42671 + chr3L 11217639 intron CG42671 + chr3L_6_11215001 chr3L_11215001 RAL-913 2275 chr3L 11229945 11230022 chr3L 11230087 11230169 21 146 21.0 23.0 22.0 0.9 224 chr3L 11229945 intergenic CG42671 + chr3L 11230057 intergenic CG42671 + chr3L 11230169 intergenic not near genes chr3L_21_11230001 chr3L_11230001 RAL-913 2276 chr3L 11241720 11241792 chr3L 11241864 11241923 26 135 0.0 11.0 5.5 4.0 203 chr3L 11241720 intergenic not near genes chr3L 11241822 intergenic not near genes chr3L 11241923 intergenic not near genes chr3L_26_11240001 chr3L_11240001 RAL-913 2277 chr3L 11256384 11256449 chr3L 11256540 11256614 5 160 3.0 0.0 1.5 2.0 230 chr3L 11256384 intergenic scyl + chr3L 11256499 intergenic scyl + chr3L 11256614 intergenic scyl + chr3L_5_11255001 chr3L_11255001 RAL-913 2278 chr3L 11264424 11264488 chr3L 11271426 11271490 17.6 25 7000 9.5 11.5 10.5 2.2 7066 chr3L 11264424 intergenic not near genes chr3L 11267957 intergenic not near genes chr3L 11271490 intergenic not near genes chr3L_25_11265001 chr3L_11265001 RAL-913 2279 chr3L 11277416 11277475 chr3L 11278455 11278495 Rt1a 13 1035 3.5 9.0 6.2 1.8 1079 chr3L 11277416 intergenic not near genes chr3L 11277956 intergenic not near genes chr3L 11278495 intergenic not near genes chr3L_13_11275001 chr3L_11275001 RAL-913 2280 chr3L 11279691 11279722 chr3L 11279814 11279818 8 119 2.5 8.0 5.2 1.3 127 chr3L 11279691 intergenic not near genes chr3L 11279754 intergenic not near genes chr3L 11279818 intergenic not near genes chr3L_8_11275001 chr3L_11275001 RAL-913 2281 chr3L 11279726 11279752 chr3L 11279802 11279883 4 117 3.0 6.0 4.5 0.7 157 chr3L 11279726 intergenic not near genes chr3L 11279804 intergenic not near genes chr3L 11279883 intergenic not near genes chr3L_4_11275001 chr3L_11275001 RAL-913 2282 chr3L 11285152 11285234 chr3L 11285353 11285435 11 200 25.0 31.0 28.0 0.4 283 chr3L 11285152 5` UTR CR45404 + chr3L 11285294 intergenic CR45404 + chr3L 11285435 intergenic CR45404 + chr3L_11_11285001 chr3L_11285001 RAL-913 2283 chr3L 11302998 11303055 chr3L 11303134 11303191 6 135 20.5 9.5 15.0 0.4 193 chr3L 11302998 intergenic not near genes chr3L 11303094 intergenic not near genes chr3L 11303191 intergenic not near genes chr3L_6_11300001 chr3L_11300001 RAL-913 2284 chr3L 11304668 11304807 chr3L 11304878 11304954 12 197 0.0 0.0 0.0 12.0 286 chr3L 11304668 intergenic not near genes chr3L 11304811 intergenic not near genes chr3L 11304954 intergenic not near genes chr3L_12_11300001 chr3L_11300001 RAL-913 2285 chr3L 11329677 11329715 chr3L 11332911 11332930 jockey 10 3242 6.0 7.5 6.8 1.3 3253 chr3L 11329677 intergenic not near genes chr3L 11331304 intergenic not near genes chr3L 11332930 intergenic not near genes chr3L_10_11330001 chr3L_11330001 RAL-913 2286 chr3L 11353088 11353159 chr3L 11353221 11353292 28 131 4.5 9.5 7.0 3.5 204 chr3L 11353088 intergenic not near genes chr3L 11353190 intergenic not near genes chr3L 11353292 intergenic not near genes chr3L_28_11350001 chr3L_11350001 RAL-913 2287 chr3L 11371726 11371776 chr3L 11371856 11371907 8 126 30.5 31.0 30.8 0.3 181 chr3L 11371726 intergenic not near genes chr3L 11371816 intergenic not near genes chr3L 11371907 intergenic not near genes chr3L_8_11370001 chr3L_11370001 RAL-913 2288 chr3L 11371777 11371789 chr3L 11371849 11371920 4 112 27.0 31.5 29.2 0.1 143 chr3L 11371777 intergenic not near genes chr3L 11371848 intergenic not near genes chr3L 11371920 intergenic not near genes chr3L_4_11370001 chr3L_11370001 RAL-913 2289 chr3L 11386046 11386085 chr3L 11386173 11386211 19 123 19.5 17.0 18.2 1.0 165 chr3L 11386046 intergenic not near genes chr3L 11386128 intergenic not near genes chr3L 11386211 intergenic not near genes chr3L_19_11385001 chr3L_11385001 RAL-913 2290 chr3L 11389290 11389291 chr3L 11720528 11720529 4 331238 15.5 41.0 28.2 0.1 331239 chr3L 11389290 intergenic not near genes chr3L 11554910 intron Mob2 - chr3L 11720529 intergenic Bmcp + chr3L_4_11550001 chr3L_11550001 RAL-913 2291 chr3L 11418374 11418447 chr3L 11418543 11418615 8 168 29.5 32.0 30.8 0.3 241 chr3L 11418374 intergenic not near genes chr3L 11418494 intergenic not near genes chr3L 11418615 intergenic not near genes chr3L_8_11415001 chr3L_11415001 RAL-913 2292 chr3L 11427204 11427231 chr3L 11427338 11427360 8 133 7.0 17.0 12.0 0.6 156 chr3L 11427204 intergenic not near genes chr3L 11427282 intergenic not near genes chr3L 11427360 intergenic not near genes chr3L_8_11425001 chr3L_11425001 RAL-913 2293 chr3L 11432869 11432931 chr3L 11432988 11433000 11 123 11.5 9.0 10.2 1.0 131 chr3L 11432869 intergenic not near genes chr3L 11432934 intergenic not near genes chr3L 11433000 intergenic not near genes chr3L_11_11430001 chr3L_11430001 RAL-913 2294 chr3L 11441350 11441370 chr3L 11441479 11441499 9 129 0.0 14.5 7.2 1.1 149 chr3L 11441350 intergenic not near genes chr3L 11441424 intergenic not near genes chr3L 11441499 intergenic not near genes chr3L_9_11440001 chr3L_11440001 RAL-913 2295 chr3L 11456858 11456905 chr3L 11457006 11457053 9 148 25.5 30.5 28.0 0.3 195 chr3L 11456858 intergenic CG12289 - chr3L 11456956 intergenic CG12289 - chr3L 11457053 intergenic CG12289 - chr3L_9_11455001 chr3L_11455001 RAL-913 2296 chr3L 11474589 11474647 chr3L 11474728 11474786 24 138 9.0 0.0 4.5 4.4 197 chr3L 11474589 intergenic Vha16-2 + chr3L 11474688 intergenic Vha16-2 + chr3L 11474786 intergenic Vha16-2 + chr3L_24_11470001 chr3L_11470001 RAL-913 2297 chr3L 11475586 11475637 chr3L 11475727 11475775 7 141 14.0 16.0 15.0 0.4 189 chr3L 11475586 intergenic Vha16-2 + chr3L 11475680 intergenic Vha16-2 + chr3L 11475775 intergenic Vha16-2 + chr3L_7_11475001 chr3L_11475001 RAL-913 2298 chr3L 11493109 11493186 chr3L 11493241 11493318 10 132 27.5 26.0 26.8 0.4 209 chr3L 11493109 intron chrb + chr3L 11493214 intron chrb + chr3L 11493318 intron chrb + chr3L_10_11490001 chr3L_11490001 RAL-913 2299 chr3L 11516890 11516940 chr3L 11517066 11517130 4 192 25.5 21.5 23.5 0.2 240 chr3L 11516890 intron CG7512 + chr3L 11517010 intron CG7512 + chr3L 11517130 exon CG7512 + chr3L_4_11515001 chr3L_11515001 RAL-913 2300 chr3L 11528181 11528256 chr3L 11528312 11528387 23 128 34.0 32.5 33.2 0.7 206 chr3L 11528181 intron Mob2 - chr3L 11528284 intron Mob2 - chr3L 11528387 intron Mob2 - chr3L_23_11525001 chr3L_11525001 RAL-913 2301 chr3L 11534959 11535018 chr3L 11535093 11535152 6 133 27.0 25.0 26.0 0.2 193 chr3L 11534959 intron Mob2 - chr3L 11535056 intron Mob2 - chr3L 11535152 intron Mob2 - chr3L_6_11535001 chr3L_11535001 RAL-913 2302 chr3L 11536850 11536905 chr3L 11536985 11537040 7 135 22.5 23.5 23.0 0.3 190 chr3L 11536850 intron Mob2 - chr3L 11536945 intron Mob2 - chr3L 11537040 intron Mob2 - chr3L_7_11535001 chr3L_11535001 RAL-913 2303 chr3L 11564594 11564663 chr3L 11572716 11572785 412 17 8122 29.0 29.5 29.2 0.6 8191 chr3L 11564594 5` UTR CG33267 + chr3L 11568690 intron CG33267 + chr3L 11572785 3` UTR CG33267 + chr3L_17_11565001 chr3L_11565001 RAL-913 2304 chr3L 11579506 11579583 chr3L 11579662 11579739 29 156 5.5 4.5 5.0 4.8 233 chr3L 11579506 intergenic CG43390 - chr3L 11579622 intergenic CG43390 - chr3L 11579739 intergenic CG43390 - chr3L_29_11575001 chr3L_11575001 RAL-913 2305 chr3L 11590221 11590264 chr3L 11590361 11590404 15 140 6.5 10.0 8.2 1.6 183 chr3L 11590221 intergenic CG7377 + chr3L 11590312 intergenic CG7377 + chr3L 11590404 intergenic CG7377 +,CG33268 - chr3L_15_11590001 chr3L_11590001 RAL-913 2306 chr3L 11601509 11601538 chr3L 11601622 11601678 5 125 17.5 22.0 19.8 0.2 169 chr3L 11601509 intron CG7368 + chr3L 11601594 intron CG7368 + chr3L 11601678 intron CG7368 + chr3L_5_11600001 chr3L_11600001 RAL-913 2307 chr3L 11663702 11663750 chr3L 11663877 11663925 12 175 12.0 1.5 6.8 1.5 223 chr3L 11663702 intron CG32085 - chr3L 11663814 intron CG32085 - chr3L 11663925 intron CG32085 - chr3L_12_11660001 chr3L_11660001 RAL-913 2308 chr3L 11678049 11678119 chr3L 11678186 11678256 28 138 7.5 9.0 8.2 3.0 207 chr3L 11678049 intron CG32085 - chr3L 11678152 intron CG32085 - chr3L 11678256 intron CG32085 - chr3L_28_11675001 chr3L_11675001 RAL-913 2309 chr3L 11711701 11711722 chr3L 11711845 11711866 6 144 4.0 15.5 9.8 0.6 165 chr3L 11711701 intergenic crim - chr3L 11711784 intergenic crim -,CG14132 - chr3L 11711866 intergenic CG14132 -,crim - chr3L_6_11710001 chr3L_11710001 RAL-913 2310 chr3L 11716471 11716551 chr3L 11716603 11716679 5 131 23.5 21.5 22.5 0.2 208 chr3L 11716471 intergenic not near genes chr3L 11716575 intergenic not near genes chr3L 11716679 intergenic not near genes chr3L_5_11715001 chr3L_11715001 RAL-913 2311 chr3L 11723046 11723107 chr3L 11727891 11727952 Doc 32 4845 11.0 16.0 13.5 2.2 4906 chr3L 11723046 3` UTR Bmcp + chr3L 11725499 intron Bmcp + chr3L 11727952 3` UTR Bmcp + chr3L_32_11725001 chr3L_11725001 RAL-913 2312 chr3L 11729628 11729704 chr3L 11729754 11729830 19 125 22.0 22.5 22.2 0.8 202 chr3L 11729628 exon CG32088 + chr3L 11729729 intron CG32088 + chr3L 11729830 exon CG32088 + chr3L_19_11725001 chr3L_11725001 RAL-913 2313 chr3L 11740096 11740150 chr3L 11740244 11740257 5 137 25.0 27.0 26.0 0.2 161 chr3L 11740096 intron CG6024 - chr3L 11740176 intron CG6024 - chr3L 11740257 intron CG6024 - chr3L_5_11740001 chr3L_11740001 RAL-913 2314 chr3L 11743977 11744043 chr3L 11744135 11744201 12 158 12.0 4.5 8.2 1.3 224 chr3L 11743977 exon CG6024 - chr3L 11744089 intron CG6024 - chr3L 11744201 intron CG6024 - chr3L_12_11740001 chr3L_11740001 RAL-913 2315 chr3L 11746620 11746680 chr3L 11746749 11746809 13 129 5.5 11.5 8.5 1.4 189 chr3L 11746620 intron CG6024 - chr3L 11746714 intron CG6024 - chr3L 11746809 intron CG6024 - chr3L_13_11745001 chr3L_11745001 RAL-913 2316 chr3L 11811410 11811476 chr3L 11811538 11811604 11 128 22.0 27.0 24.5 0.4 194 chr3L 11811410 intron CG42255 - chr3L 11811507 intron CG42255 - chr3L 11811604 exon CG42255 - chr3L_11_11810001 chr3L_11810001 RAL-913 2317 chr3L 11816769 11816806 chr3L 11816920 11816957 11 150 28.5 22.0 25.2 0.4 188 chr3L 11816769 3` UTR CG5946 - chr3L 11816863 3` UTR CG5946 - chr3L 11816957 3` UTR CG5946 - chr3L_11_11815001 chr3L_11815001 RAL-913 2318 chr3L 11818929 11819129 chr3L 11819058 11819260 17 131 17.5 17.5 17.5 0.9 331 chr3L 11818929 intron CG5946 - chr3L 11819094 intron CG5946 - chr3L 11819260 intron CG5946 - chr3L_17_11815001 chr3L_11815001 RAL-913 2319 chr3L 11833666 11833698 chr3L 11833820 11833852 9 154 27.5 26.0 26.8 0.3 186 chr3L 11833666 intergenic CycA - chr3L 11833759 intergenic CycA - chr3L 11833852 intergenic CycA - chr3L_9_11830001 chr3L_11830001 RAL-913 2320 chr3L 11840159 11840219 chr3L 11840439 11840499 17 279 21.0 20.0 20.5 0.8 340 chr3L 11840159 intergenic not near genes chr3L 11840329 intergenic not near genes chr3L 11840499 intergenic not near genes chr3L_17_11840001 chr3L_11840001 RAL-913 2321 chr3L 11841642 11841715 chr3L 11841785 11841859 10 144 28.0 29.0 28.5 0.3 217 chr3L 11841642 intergenic not near genes chr3L 11841750 intergenic not near genes chr3L 11841859 intergenic not near genes chr3L_10_11840001 chr3L_11840001 RAL-913 2322 chr3L 11846350 11846366 chr3L 11846479 11846524 6 159 6.0 0.0 3.0 1.5 174 chr3L 11846350 intergenic not near genes chr3L 11846437 intergenic not near genes chr3L 11846524 intergenic not near genes chr3L_6_11845001 chr3L_11845001 RAL-913 2323 chr3L 11849289 11849348 chr3L 11849439 11849498 24 150 18.0 21.0 19.5 1.2 209 chr3L 11849289 intergenic not near genes chr3L 11849394 intergenic not near genes chr3L 11849498 intergenic not near genes chr3L_24_11845001 chr3L_11845001 RAL-913 2324 chr3L 11850819 11850835 chr3L 11850960 11850961 7 139 31.0 19.0 25.0 0.3 142 chr3L 11850819 3` UTR CG44837 - chr3L 11850890 3` UTR CG44837 - chr3L 11850961 3` UTR CG44837 - chr3L_7_11850001 chr3L_11850001 RAL-913 2325 chr3L 11864531 11864580 chr3L 11865854 11865925 pogo 22 1340 6.5 8.0 7.2 2.7 1394 chr3L 11864531 intron CG44837 - chr3L 11865228 intron CG44837 - chr3L 11865925 intron CG44837 - chr3L_22_11865001 chr3L_11865001 RAL-913 2326 chr3L 11887208 11887289 chr3L 11887355 11887436 27 148 4.5 0.0 2.2 8.4 228 chr3L 11887208 intron CG44837 - chr3L 11887322 intron,3` UTR CG44837 -,CG5897 - chr3L 11887436 intron,3` UTR CG44837 -,CG5897 - chr3L_27_11885001 chr3L_11885001 RAL-913 2327 chr3L 11894961 11895037 chr3L 11895114 11895190 16 153 22.0 23.0 22.5 0.7 229 chr3L 11894961 intron CG44837 - chr3L 11895076 intron CG44837 - chr3L 11895190 intron CG44837 - chr3L_16_11895001 chr3L_11895001 RAL-913 2328 chr3L 11915977 11915985 chr3L 11916109 11916117 7 132 17.0 18.0 17.5 0.4 140 chr3L 11915977 intron CG44837 - chr3L 11916047 intron CG44837 - chr3L 11916117 intron CG44837 - chr3L_7_11915001 chr3L_11915001 RAL-913 2329 chr3L 11916867 11916930 chr3L 11917006 11917069 20 139 22.0 18.5 20.2 0.9 202 chr3L 11916867 intron CG44837 - chr3L 11916968 intron CG44837 - chr3L 11917069 intron CG44837 - chr3L_20_11915001 chr3L_11915001 RAL-913 2330 chr3L 11937054 11937106 chr3L 11937182 11937226 6 124 21.5 19.5 20.5 0.3 172 chr3L 11937054 exon CG44837 - chr3L 11937140 exon CG44837 - chr3L 11937226 exon CG44837 - chr3L_6_11935001 chr3L_11935001 RAL-913 2331 chr3L 11943450 11943508 chr3L 11943601 11943659 14 151 27.5 26.0 26.8 0.5 209 chr3L 11943450 3` UTR Rpt4R + chr3L 11943554 intergenic Rpt4R +,CG5883 - chr3L 11943659 3` UTR CG5883 - chr3L_14_11940001 chr3L_11940001 RAL-913 2332 chr3L 11967032 11967075 chr3L 11967157 11967202 8 127 34.0 33.0 33.5 0.2 170 chr3L 11967032 intergenic Muc68E - chr3L 11967117 intergenic Muc68E - chr3L 11967202 intergenic Muc68E - chr3L_8_11965001 chr3L_11965001 RAL-913 2333 chr3L 11984545 11984590 chr3L 11984662 11984739 5 132 17.0 12.0 14.5 0.3 194 chr3L 11984545 intergenic CG6938 + chr3L 11984642 intergenic CG6938 + chr3L 11984739 intergenic CG6938 + chr3L_5_11980001 chr3L_11980001 RAL-913 2334 chr3L 12028378 12028417 chr3L 12028511 12028532 9 131 8.0 18.5 13.2 0.6 154 chr3L 12028378 intron rols - chr3L 12028455 intron rols - chr3L 12028532 intron rols - chr3L_9_12025001 chr3L_12025001 RAL-913 2335 chr3L 12051983 12052029 chr3L 12052147 12052193 12 164 22.0 26.5 24.2 0.5 210 chr3L 12051983 intron rols - chr3L 12052088 intron rols - chr3L 12052193 intron rols - chr3L_12_12050001 chr3L_12050001 RAL-913 2336 chr3L 12053247 12053283 chr3L 12053375 12053411 7 128 30.5 29.5 30.0 0.2 164 chr3L 12053247 intron rols - chr3L 12053329 intron rols - chr3L 12053411 intron rols - chr3L_7_12050001 chr3L_12050001 RAL-913 2337 chr3L 12075381 12075456 chr3L 12075520 12075590 18 135 16.0 10.0 13.0 1.3 209 chr3L 12075381 intron Sema-5c - chr3L 12075486 intron Sema-5c - chr3L 12075590 intron Sema-5c - chr3L_18_12075001 chr3L_12075001 RAL-913 2338 chr3L 12089033 12089110 chr3L 12089163 12089240 26 130 21.5 17.5 19.5 1.3 207 chr3L 12089033 exon CG17154 + chr3L 12089136 3` UTR CG17154 + chr3L 12089240 intergenic CG17154 + chr3L_26_12085001 chr3L_12085001 RAL-913 2339 chr3L 12092348 12092420 chr3L 12092475 12092547 28 127 24.5 19.5 22.0 1.2 199 chr3L 12092348 intergenic not near genes chr3L 12092448 intergenic not near genes chr3L 12092547 intergenic not near genes chr3L_28_12090001 chr3L_12090001 RAL-913 2340 chr3L 12092473 12092526 chr3L 12093936 12093989 14 1461 28.5 36.5 32.5 0.4 1516 chr3L 12092473 intergenic not near genes chr3L 12093231 intergenic not near genes chr3L 12093989 intergenic not near genes chr3L_14_12090001 chr3L_12090001 RAL-913 2341 chr3L 12097527 12097549 chr3L 12097656 12097686 4 132 27.0 33.0 30.0 0.1 159 chr3L 12097527 intergenic not near genes chr3L 12097606 intergenic not near genes chr3L 12097686 intergenic not near genes chr3L_4_12095001 chr3L_12095001 RAL-913 2342 chr3L 12108448 12108470 chr3L 12108584 12108606 10 136 9.5 0.0 4.8 1.7 158 chr3L 12108448 intergenic not near genes chr3L 12108527 intergenic not near genes chr3L 12108606 intergenic not near genes chr3L_10_12105001 chr3L_12105001 RAL-913 2343 chr3L 12114840 12114848 chr3L 12114971 12114979 4 131 19.5 15.5 17.5 0.2 139 chr3L 12114840 intergenic not near genes chr3L 12114910 intergenic not near genes chr3L 12114979 intergenic not near genes chr3L_4_12110001 chr3L_12110001 RAL-913 2344 chr3L 12160096 12160133 chr3L 12160248 12160285 5 151 32.0 27.0 29.5 0.2 189 chr3L 12160096 intron CG9760 - chr3L 12160190 intron CG9760 - chr3L 12160285 intron CG9760 - chr3L_5_12160001 chr3L_12160001 RAL-913 2345 chr3L 12170758 12170816 chr3L 12170875 12170948 7 130 22.0 27.5 24.8 0.3 190 chr3L 12170758 intron Rh7 - chr3L 12170853 intron Rh7 - chr3L 12170948 intron Rh7 - chr3L_7_12170001 chr3L_12170001 RAL-913 2346 chr3L 12177112 12177176 chr3L 12177241 12177305 8 128 20.5 22.5 21.5 0.4 193 chr3L 12177112 intergenic CAH2 + chr3L 12177208 intergenic CAH2 + chr3L 12177305 intergenic CAH2 + chr3L_8_12175001 chr3L_12175001 RAL-913 2347 chr3L 12178704 12178720 chr3L 12178833 12178850 4 128 23.5 21.0 22.2 0.2 146 chr3L 12178704 intron CAH2 + chr3L 12178777 intron CAH2 + chr3L 12178850 intron CAH2 + chr3L_4_12175001 chr3L_12175001 RAL-913 2348 chr3L 12186372 12186395 chr3L 12186538 12186561 6 166 28.5 27.5 28.0 0.2 189 chr3L 12186372 intron CG6910 + chr3L 12186466 intron CG6910 + chr3L 12186561 exon CG6910 + chr3L_6_12185001 chr3L_12185001 RAL-913 2349 chr3L 12208193 12208245 chr3L 12208321 12208373 20 126 21.0 18.5 19.8 1.0 180 chr3L 12208193 intron app - chr3L 12208283 intron app - chr3L 12208373 intron app - chr3L_20_12205001 chr3L_12205001 RAL-913 2350 chr3L 12221400 12221470 chr3L 12221557 12221627 13 156 23.5 26.5 25.0 0.5 227 chr3L 12221400 intron app - chr3L 12221514 intron app - chr3L 12221627 intron app - chr3L_13_12220001 chr3L_12220001 RAL-913 2351 chr3L 12255608 12255662 chr3L 12255758 12255837 15 167 19.5 23.5 21.5 0.7 229 chr3L 12255608 intron app - chr3L 12255722 intron app - chr3L 12255837 intron app - chr3L_15_12255001 chr3L_12255001 RAL-913 2352 chr3L 12259438 12259499 chr3L 12259647 12259708 7 210 6.5 6.0 6.2 1.0 270 chr3L 12259438 intron app - chr3L 12259573 intron app - chr3L 12259708 intron app - chr3L_7_12255001 chr3L_12255001 RAL-913 2353 chr3L 12265076 12265149 chr3L 12265212 12265286 9 136 27.0 24.5 25.8 0.3 210 chr3L 12265076 intron app - chr3L 12265181 intron app - chr3L 12265286 intron app - chr3L_9_12265001 chr3L_12265001 RAL-913 2354 chr3L 12311445 12311459 chr3L 12311573 12311587 5 128 22.0 25.5 23.8 0.2 142 chr3L 12311445 3` UTR CG44355 + chr3L 12311516 3` UTR CG44355 + chr3L 12311587 intron CG44355 + chr3L_5_12310001 chr3L_12310001 RAL-913 2355 chr3L 12319700 12319751 chr3L 12319899 12319950 9 198 18.5 16.0 17.2 0.5 250 chr3L 12319700 intergenic not near genes chr3L 12319825 intergenic not near genes chr3L 12319950 intergenic not near genes chr3L_9_12315001 chr3L_12315001 RAL-913 2356 chr3L 12321660 12321689 chr3L 12321795 12321829 5 138 0.0 6.0 3.0 1.2 169 chr3L 12321660 intergenic not near genes chr3L 12321744 intergenic not near genes chr3L 12321829 intergenic not near genes chr3L_5_12320001 chr3L_12320001 RAL-913 2357 chr3L 12349149 12349186 chr3L 12349800 12349837 7 650 9.5 26.5 18.0 0.4 688 chr3L 12349149 intron CrzR - chr3L 12349493 intron CrzR - chr3L 12349837 intron CrzR - chr3L_7_12345001 chr3L_12345001 RAL-913 2358 chr3L 12353882 12353942 chr3L 12354015 12354070 5 133 15.5 16.0 15.8 0.3 188 chr3L 12353882 intergenic not near genes chr3L 12353976 intergenic not near genes chr3L 12354070 intergenic not near genes chr3L_5_12350001 chr3L_12350001 RAL-913 2359 chr3L 12354532 12354584 chr3L 12355334 12355396 9 812 27.5 25.5 26.5 0.3 864 chr3L 12354532 intergenic not near genes chr3L 12354964 intergenic not near genes chr3L 12355396 intergenic not near genes chr3L_9_12350001 chr3L_12350001 RAL-913 2360 chr3L 12357184 12357198 chr3L 12357310 12357324 5 126 10.5 11.5 11.0 0.4 140 chr3L 12357184 intergenic not near genes chr3L 12357254 intergenic not near genes chr3L 12357324 intergenic not near genes chr3L_5_12355001 chr3L_12355001 RAL-913 2361 chr3L 12364125 12364176 chr3L 12364314 12364364 11 188 16.0 20.5 18.2 0.6 239 chr3L 12364125 intergenic not near genes chr3L 12364244 intergenic not near genes chr3L 12364364 intergenic not near genes chr3L_11_12360001 chr3L_12360001 RAL-913 2362 chr3L 12369490 12369555 chr3L 12369630 12369695 18 140 28.0 26.5 27.2 0.6 205 chr3L 12369490 intron Ncc69 - chr3L 12369592 intron Ncc69 - chr3L 12369695 intron Ncc69 - chr3L_18_12365001 chr3L_12365001 RAL-913 2363 chr3L 12381490 12381550 chr3L 12381618 12381681 8 129 3.5 5.5 4.5 1.5 191 chr3L 12381490 intron Ncc69 - chr3L 12381586 intron Ncc69 - chr3L 12381681 intron Ncc69 - chr3L_8_12380001 chr3L_12380001 RAL-913 2364 chr3L 12446258 12446273 chr3L 12446348 12446401 7 109 22.5 13.5 18.0 0.4 143 chr3L 12446258 intergenic not near genes chr3L 12446330 intergenic not near genes chr3L 12446401 intergenic not near genes chr3L_7_12445001 chr3L_12445001 RAL-913 2365 chr3L 12446279 12446293 chr3L 12446347 12446351 5 79 18.0 13.0 15.5 0.3 72 chr3L 12446279 intergenic not near genes chr3L 12446315 intergenic not near genes chr3L 12446351 intergenic not near genes chr3L_5_12445001 chr3L_12445001 RAL-913 2366 chr3L 12458492 12458505 chr3L 12458641 12458654 5 149 9.5 20.5 15.0 0.3 162 chr3L 12458492 intergenic not near genes chr3L 12458573 intergenic not near genes chr3L 12458654 intergenic not near genes chr3L_5_12455001 chr3L_12455001 RAL-913 2367 chr3L 12460275 12460339 chr3L 12460402 12460463 11 126 18.0 24.5 21.2 0.5 188 chr3L 12460275 intergenic not near genes chr3L 12460369 intergenic not near genes chr3L 12460463 intergenic not near genes chr3L_11_12460001 chr3L_12460001 RAL-913 2368 chr3L 12466644 12466711 chr3L 12467121 12467188 14 477 25.0 30.5 27.8 0.5 544 chr3L 12466644 intron eyg - chr3L 12466916 intron eyg - chr3L 12467188 intron eyg - chr3L_14_12465001 chr3L_12465001 RAL-913 2369 chr3L 12476239 12476320 chr3L 12476366 12476421 34 125 3.5 9.0 6.2 4.7 182 chr3L 12476239 intron CG10663 - chr3L 12476330 intron CG10663 - chr3L 12476421 intron CG10663 - chr3L_34_12475001 chr3L_12475001 RAL-913 2370 chr3L 12478548 12478600 chr3L 12478670 12478749 21 144 11.5 14.0 12.8 1.5 201 chr3L 12478548 intron CG10663 - chr3L 12478648 intron CG10663 - chr3L 12478749 intron CG10663 - chr3L_21_12475001 chr3L_12475001 RAL-913 2371 chr3L 12491675 12491710 chr3L 12491808 12491843 10 133 0.0 6.0 3.0 2.5 168 chr3L 12491675 intergenic CG10657 -,CR45682 +,CR45681 + chr3L 12491759 intergenic CG10657 -,CR45682 + chr3L 12491843 3` UTR,5` UTR CG10657 -,CR45682 + chr3L_10_12490001 chr3L_12490001 RAL-913 2372 chr3L 12496548 12496563 chr3L 12496704 12496719 4 156 24.0 26.5 25.2 0.2 171 chr3L 12496548 intron CG10657 - chr3L 12496634 intron CG10657 - chr3L 12496719 intron CG10657 - chr3L_4_12495001 chr3L_12495001 RAL-913 2373 chr3L 12501630 12501694 chr3L 12501767 12501831 17 135 28.0 21.0 24.5 0.7 201 chr3L 12501630 5` UTR CG10681 + chr3L 12501730 intron CG10681 + chr3L 12501831 exon CG10681 + chr3L_17_12500001 chr3L_12500001 RAL-913 2374 chr3L 12546069 12546109 chr3L 12546197 12546237 7 128 16.0 14.5 15.2 0.4 168 chr3L 12546069 intron sowah - chr3L 12546153 intron sowah - chr3L 12546237 intron sowah - chr3L_7_12545001 chr3L_12545001 RAL-913 2375 chr3L 12555583 12555651 chr3L 12555727 12555795 20 141 19.0 17.5 18.2 1.0 212 chr3L 12555583 intron sowah - chr3L 12555689 intron sowah - chr3L 12555795 intron sowah - chr3L_20_12555001 chr3L_12555001 RAL-913 2376 chr3L 12578003 12578047 chr3L 12578141 12578172 5 135 10.0 3.0 6.5 0.7 169 chr3L 12578003 intergenic not near genes chr3L 12578088 intergenic not near genes chr3L 12578172 intergenic not near genes chr3L_5_12575001 chr3L_12575001 RAL-913 2377 chr3L 12587332 12587485 chr3L 12587465 12587612 11 130 15.5 16.0 15.8 0.7 280 chr3L 12587332 intron ara + chr3L 12587472 intron ara + chr3L 12587612 intron ara + chr3L_11_12585001 chr3L_12585001 RAL-913 2378 chr3L 12603941 12604025 chr3L 12604069 12604153 6 128 25.0 25.0 25.0 0.2 212 chr3L 12603941 intergenic not near genes chr3L 12604047 intergenic not near genes chr3L 12604153 intergenic not near genes chr3L_6_12600001 chr3L_12600001 RAL-913 2379 chr3L 12605677 12605746 chr3L 12605806 12605875 13 130 19.0 20.5 19.8 0.6 198 chr3L 12605677 intergenic not near genes chr3L 12605776 intergenic not near genes chr3L 12605875 intergenic not near genes chr3L_13_12605001 chr3L_12605001 RAL-913 2380 chr3L 12610953 12611017 chr3L 12611249 12611313 24 296 15.5 20.0 17.8 1.3 360 chr3L 12610953 intron caup + chr3L 12611133 intron caup + chr3L 12611313 intron caup + chr3L_24_12610001 chr3L_12610001 RAL-913 2381 chr3L 12620927 12620976 chr3L 12621075 12621124 11 147 18.5 11.0 14.8 0.7 197 chr3L 12620927 3` UTR caup + chr3L 12621026 3` UTR caup + chr3L 12621124 3` UTR caup + chr3L_11_12620001 chr3L_12620001 RAL-913 2382 chr3L 12626136 12626156 chr3L 12626295 12626315 11 159 22.0 24.5 23.2 0.5 179 chr3L 12626136 intergenic not near genes chr3L 12626226 intergenic not near genes chr3L 12626315 intergenic not near genes chr3L_11_12625001 chr3L_12625001 RAL-913 2383 chr3L 12659374 12659400 chr3L 12659511 12659538 8 138 5.5 26.0 15.8 0.5 164 chr3L 12659374 5` UTR CR44553 + chr3L 12659456 5` UTR CR44553 + chr3L 12659538 5` UTR CR44553 + chr3L_8_12655001 chr3L_12655001 RAL-913 2384 chr3L 12666882 12666955 chr3L 12667044 12667119 13 163 17.5 15.0 16.2 0.8 237 chr3L 12666882 intergenic not near genes chr3L 12667000 intergenic not near genes chr3L 12667119 intergenic not near genes chr3L_13_12665001 chr3L_12665001 RAL-913 2385 chr3L 12691349 12691396 chr3L 12691596 12691643 23 246 15.5 21.0 18.2 1.2 294 chr3L 12691349 intergenic not near genes chr3L 12691496 intergenic not near genes chr3L 12691643 intergenic not near genes chr3L_23_12690001 chr3L_12690001 RAL-913 2386 chr3L 12722246 12722284 chr3L 12722378 12722416 6 130 6.0 5.5 5.8 0.9 170 chr3L 12722246 intergenic not near genes chr3L 12722331 intergenic not near genes chr3L 12722416 intergenic not near genes chr3L_6_12720001 chr3L_12720001 RAL-913 2387 chr3L 12799806 12799835 chr3L 12799964 12799993 4 158 27.5 20.0 23.8 0.2 187 chr3L 12799806 intron Atg1 - chr3L 12799900 intron Atg1 - chr3L 12799993 intron Atg1 - chr3L_4_12795001 chr3L_12795001 RAL-913 2388 chr3L 12857950 12857998 chr3L 12858095 12858143 34 145 9.5 7.0 8.2 3.7 193 chr3L 12857950 3` UTR CG32107 - chr3L 12858046 3` UTR CG32107 - chr3L 12858143 3` UTR CG32107 - chr3L_34_12855001 chr3L_12855001 RAL-913 2389 chr3L 12870312 12870332 chr3L 12870457 12870477 6 145 30.5 34.0 32.2 0.2 165 chr3L 12870312 intergenic not near genes chr3L 12870394 intergenic not near genes chr3L 12870477 intergenic not near genes chr3L_6_12870001 chr3L_12870001 RAL-913 2390 chr3L 12874885 12874944 chr3L 12877227 12877286 jockey 21 2341 11.5 10.0 10.8 1.8 2401 chr3L 12874885 intergenic not near genes chr3L 12876086 intergenic not near genes chr3L 12877286 intergenic not near genes chr3L_21_12875001 chr3L_12875001 RAL-913 2391 chr3L 12883582 12883645 chr3L 12883994 12884057 12 412 29.0 30.0 29.5 0.4 475 chr3L 12883582 intergenic not near genes chr3L 12883820 intergenic not near genes chr3L 12884057 intergenic not near genes chr3L_12_12880001 chr3L_12880001 RAL-913 2392 chr3L 12886450 12886461 chr3L 12886685 12886691 4 233 16.0 19.5 17.8 0.2 241 chr3L 12886450 exon CG14120 + chr3L 12886570 exon CG14120 + chr3L 12886691 exon CG14120 + chr3L_4_12885001 chr3L_12885001 RAL-913 2393 chr3L 12894766 12894809 chr3L 12894894 12894921 17 123 12.0 12.5 12.2 1.3 155 chr3L 12894766 intergenic CG14118 + chr3L 12894844 intergenic CG14118 + chr3L 12894921 intergenic CG14118 + chr3L_17_12890001 chr3L_12890001 RAL-913 2394 chr3L 12906765 12906788 chr3L 12906899 12906922 6 134 29.0 24.5 26.8 0.2 157 chr3L 12906765 intergenic not near genes chr3L 12906844 intergenic not near genes chr3L 12906922 intergenic not near genes chr3L_6_12905001 chr3L_12905001 RAL-913 2395 chr3L 12919256 12919307 chr3L 12924762 12924841 Rt1c 4 5520 8.0 8.0 8.0 0.4 5585 chr3L 12919256 intergenic not near genes chr3L 12922048 intergenic not near genes chr3L 12924841 intergenic not near genes chr3L_4_12920001 chr3L_12920001 RAL-913 2396 chr3L 12928908 12928977 chr3L 12929043 12929112 41 132 26.0 24.0 25.0 1.6 204 chr3L 12928908 intergenic not near genes chr3L 12929010 intergenic not near genes chr3L 12929112 intergenic not near genes chr3L_41_12925001 chr3L_12925001 RAL-913 2397 chr3L 12929706 12929743 chr3L 12930072 12930109 20 366 19.5 27.0 23.2 0.8 403 chr3L 12929706 intergenic not near genes chr3L 12929908 intergenic not near genes chr3L 12930109 intergenic not near genes chr3L_20_12925001 chr3L_12925001 RAL-913 2398 chr3L 12928841 12928891 chr3L 12933723 12933764 7 4880 43.5 51.0 47.2 0.1 4923 chr3L 12928841 intergenic not near genes chr3L 12931302 intergenic not near genes chr3L 12933764 intergenic not near genes chr3L_7_12930001 chr3L_12930001 RAL-913 2399 chr3L 12928837 12928904 chr3L 12933765 12933783 4 4890 37.5 43.5 40.5 0.1 4946 chr3L 12928837 intergenic not near genes chr3L 12931310 intergenic not near genes chr3L 12933783 intergenic not near genes chr3L_4_12930001 chr3L_12930001 RAL-913 2400 chr3L 12941939 12941990 chr3L 12942096 12942144 17 157 15.0 22.5 18.8 0.9 205 chr3L 12941939 intergenic not near genes chr3L 12942042 intergenic not near genes chr3L 12942144 intergenic not near genes chr3L_17_12940001 chr3L_12940001 RAL-913 2401 chr3L 12957747 12957808 chr3L 12962279 12962340 copia 22 4532 10.0 11.0 10.5 1.9 4593 chr3L 12957747 intergenic not near genes chr3L 12960044 intergenic not near genes chr3L 12962340 intergenic not near genes chr3L_22_12960001 chr3L_12960001 RAL-913 2402 chr3L 12967092 12967159 chr3L 12967226 12967293 13 133 23.5 23.5 23.5 0.5 201 chr3L 12967092 exon Or69a - chr3L 12967192 exon Or69a - chr3L 12967293 exon Or69a - chr3L_13_12965001 chr3L_12965001 RAL-913 2403 chr3L 12977427 12977477 chr3L 12977534 12977604 18 124 32.0 30.5 31.2 0.6 177 chr3L 12977427 intergenic not near genes chr3L 12977516 intergenic not near genes chr3L 12977604 intergenic not near genes chr3L_18_12975001 chr3L_12975001 RAL-913 2404 chr3L 13031530 13031603 chr3L 13031665 13031740 11 137 27.0 30.5 28.8 0.4 210 chr3L 13031530 intron CG17672 + chr3L 13031635 intron CG17672 + chr3L 13031740 intron CG17672 + chr3L_11_13030001 chr3L_13030001 RAL-913 2405 chr3L 13050517 13050587 chr3L 13050646 13050716 29 128 10.5 11.0 10.8 2.5 199 chr3L 13050517 intergenic not near genes chr3L 13050616 intergenic not near genes chr3L 13050716 intergenic not near genes chr3L_29_13050001 chr3L_13050001 RAL-913 2406 chr3L 13055954 13056002 chr3L 13056079 13056133 9 133 17.5 15.0 16.2 0.5 179 chr3L 13055954 intergenic not near genes chr3L 13056044 intergenic not near genes chr3L 13056133 intergenic not near genes chr3L_9_13055001 chr3L_13055001 RAL-913 2407 chr3L 13073912 13073987 chr3L 13074101 13074176 15 189 25.0 21.5 23.2 0.6 264 chr3L 13073912 intergenic not near genes chr3L 13074044 intergenic not near genes chr3L 13074176 intergenic not near genes chr3L_15_13070001 chr3L_13070001 RAL-913 2408 chr3L 13092871 13092941 chr3L 13094052 13094102 11 1181 30.0 40.0 35.0 0.3 1231 chr3L 13092871 intergenic not near genes chr3L 13093486 intergenic not near genes chr3L 13094102 intergenic not near genes chr3L_11_13090001 chr3L_13090001 RAL-913 2409 chr3L 13091943 13092012 chr3L 13094090 13094154 18 2142 55.0 38.0 46.5 0.4 2211 chr3L 13091943 intergenic not near genes chr3L 13093048 intergenic not near genes chr3L 13094154 intergenic not near genes chr3L_18_13090001 chr3L_13090001 RAL-913 2410 chr3L 13094651 13094694 chr3L 13094804 13094847 7 153 14.0 18.0 16.0 0.4 196 chr3L 13094651 intergenic not near genes chr3L 13094749 intergenic not near genes chr3L 13094847 intergenic not near genes chr3L_7_13090001 chr3L_13090001 RAL-913 2411 chr3L 13095768 13095802 chr3L 13095906 13095940 6 138 22.5 3.5 13.0 0.4 172 chr3L 13095768 intergenic not near genes chr3L 13095854 intergenic not near genes chr3L 13095940 intergenic not near genes chr3L_6_13095001 chr3L_13095001 RAL-913 2412 chr3L 13105083 13105130 chr3L 13105256 13105303 7 173 28.5 25.5 27.0 0.2 220 chr3L 13105083 intergenic not near genes chr3L 13105193 intergenic not near genes chr3L 13105303 intergenic not near genes chr3L_7_13105001 chr3L_13105001 RAL-913 2413 chr3L 13123604 13123642 chr3L 13123715 13123768 7 124 14.0 10.5 12.2 0.5 164 chr3L 13123604 intergenic not near genes chr3L 13123686 intergenic not near genes chr3L 13123768 intergenic not near genes chr3L_7_13120001 chr3L_13120001 RAL-913 2414 chr3L 13137604 13137663 chr3L 13137742 13137785 10 131 24.5 23.0 23.8 0.4 181 chr3L 13137604 intergenic not near genes chr3L 13137694 intergenic not near genes chr3L 13137785 intergenic not near genes chr3L_10_13135001 chr3L_13135001 RAL-913 2415 chr3L 13140820 13140886 chr3L 13141046 13141112 13 225 26.0 23.5 24.8 0.5 292 chr3L 13140820 intergenic not near genes chr3L 13140966 intergenic not near genes chr3L 13141112 intergenic not near genes chr3L_13_13140001 chr3L_13140001 RAL-913 2416 chr3L 13144081 13144147 chr3L 13144208 13144274 17 127 21.5 22.0 21.8 0.7 193 chr3L 13144081 intergenic not near genes chr3L 13144178 intergenic not near genes chr3L 13144274 intergenic not near genes chr3L_17_13140001 chr3L_13140001 RAL-913 2417 chr3L 13148628 13148674 chr3L 13148754 13148779 9 123 19.0 19.5 19.2 0.4 151 chr3L 13148628 intergenic not near genes chr3L 13148704 intergenic not near genes chr3L 13148779 intergenic not near genes chr3L_9_13145001 chr3L_13145001 RAL-913 2418 chr3L 13159241 13159293 chr3L 13159371 13159422 14 127 8.0 7.0 7.5 1.6 181 chr3L 13159241 intergenic not near genes chr3L 13159332 intergenic not near genes chr3L 13159422 intergenic not near genes chr3L_14_13155001 chr3L_13155001 RAL-913 2419 chr3L 13167235 13167252 chr3L 13167449 13167466 6 214 32.5 30.0 31.2 0.2 231 chr3L 13167235 intergenic not near genes chr3L 13167350 intergenic not near genes chr3L 13167466 intergenic not near genes chr3L_6_13165001 chr3L_13165001 RAL-913 2420 chr3L 13174213 13174271 chr3L 13174355 13174413 6 142 25.0 26.5 25.8 0.2 200 chr3L 13174213 intergenic snky + chr3L 13174313 intergenic snky + chr3L 13174413 intergenic snky + chr3L_6_13170001 chr3L_13170001 RAL-913 2421 chr3L 13197053 13197114 chr3L 13197227 13197281 9 170 22.0 21.0 21.5 0.4 228 chr3L 13197053 intergenic not near genes chr3L 13197167 intergenic not near genes chr3L 13197281 intergenic not near genes chr3L_9_13195001 chr3L_13195001 RAL-913 2422 chr3L 13201229 13201299 chr3L 13201589 13201659 10 358 26.5 17.0 21.8 0.4 430 chr3L 13201229 intergenic not near genes chr3L 13201444 intergenic not near genes chr3L 13201659 intergenic not near genes chr3L_10_13200001 chr3L_13200001 RAL-913 2423 chr3L 13206188 13206260 chr3L 13206320 13206392 16 131 14.0 19.5 16.8 0.9 204 chr3L 13206188 intergenic not near genes chr3L 13206290 intergenic not near genes chr3L 13206392 intergenic not near genes chr3L_16_13205001 chr3L_13205001 RAL-913 2424 chr3L 13214659 13214715 chr3L 13214787 13214849 5 123 23.0 20.0 21.5 0.2 190 chr3L 13214659 intergenic not near genes chr3L 13214754 intergenic not near genes chr3L 13214849 intergenic CR45097 - chr3L_5_13210001 chr3L_13210001 RAL-913 2425 chr3L 13241145 13241188 chr3L 13241271 13241316 11 129 26.0 14.0 20.0 0.5 171 chr3L 13241145 intron caps + chr3L 13241230 intron caps + chr3L 13241316 intron caps + chr3L_11_13240001 chr3L_13240001 RAL-913 2426 chr3L 13246642 13246694 chr3L 13246779 13246821 10 144 18.5 16.5 17.5 0.5 179 chr3L 13246642 intron caps + chr3L 13246732 intron caps + chr3L 13246821 intron caps + chr3L_10_13245001 chr3L_13245001 RAL-913 2427 chr3L 13265145 13265211 chr3L 13265273 13265339 17 123 17.5 19.5 18.5 0.9 194 chr3L 13265145 intron caps + chr3L 13265242 5` UTR caps + chr3L 13265339 5` UTR caps + chr3L_17_13265001 chr3L_13265001 RAL-913 2428 chr3L 13266369 13266408 chr3L 13266516 13266555 6 147 25.5 34.5 30.0 0.2 186 chr3L 13266369 intron caps + chr3L 13266462 intron caps + chr3L 13266555 intron caps + chr3L_6_13265001 chr3L_13265001 RAL-913 2429 chr3L 13267238 13267285 chr3L 13267401 13267448 8 163 27.0 23.0 25.0 0.3 210 chr3L 13267238 intron caps + chr3L 13267343 intron caps + chr3L 13267448 intron caps + chr3L_8_13265001 chr3L_13265001 RAL-913 2430 chr3L 13296471 13296544 chr3L 13296612 13296685 17 141 25.0 25.5 25.2 0.6 214 chr3L 13296471 intergenic Sfp70A4 - chr3L 13296578 3` UTR Sfp70A4 - chr3L 13296685 3` UTR Sfp70A4 - chr3L_17_13295001 chr3L_13295001 RAL-913 2431 chr3L 13299357 13299426 chr3L 13299498 13299567 14 141 29.5 21.5 25.5 0.5 210 chr3L 13299357 intergenic CG42481 -,CG43147 - chr3L 13299462 intergenic CG43147 -,CG42481 - chr3L 13299567 intergenic CG43147 - chr3L_14_13295001 chr3L_13295001 RAL-913 2432 chr3L 13301263 13301270 chr3L 13301395 13301402 6 132 21.5 28.5 25.0 0.2 139 chr3L 13301263 intergenic SP + chr3L 13301332 intergenic SP + chr3L 13301402 intergenic SP + chr3L_6_13300001 chr3L_13300001 RAL-913 2433 chr3L 13307410 13307446 chr3L 13307539 13307575 7 128 19.5 19.0 19.2 0.3 165 chr3L 13307410 intergenic not near genes chr3L 13307492 intergenic not near genes chr3L 13307575 intergenic not near genes chr3L_7_13305001 chr3L_13305001 RAL-913 2434 chr3L 13315806 13315889 chr3L 13315943 13316203 20 172 7.0 4.5 5.8 2.9 397 chr3L 13315806 intergenic not near genes chr3L 13316004 intergenic not near genes chr3L 13316203 intergenic not near genes chr3L_20_13315001 chr3L_13315001 RAL-913 2435 chr3L 13315935 13315946 chr3L 13316249 13316260 4 314 2.0 36.0 19.0 0.2 325 chr3L 13315935 intergenic not near genes chr3L 13316098 intergenic not near genes chr3L 13316260 intergenic not near genes chr3L_4_13315001 chr3L_13315001 RAL-913 2436 chr3L 13317784 13317787 chr3L 13318005 13318008 4 221 0.0 24.5 12.2 0.3 224 chr3L 13317784 intergenic not near genes chr3L 13317896 intergenic not near genes chr3L 13318008 intergenic not near genes chr3L_4_13315001 chr3L_13315001 RAL-913 2437 chr3L 13337124 13337148 chr3L 13337265 13337289 10 141 5.0 7.0 6.0 1.4 165 chr3L 13337124 intergenic not near genes chr3L 13337206 intergenic not near genes chr3L 13337289 intergenic not near genes chr3L_10_13335001 chr3L_13335001 RAL-913 2438 chr3L 13342775 13342838 chr3L 13342908 13342971 9 133 25.0 26.5 25.8 0.3 196 chr3L 13342775 intergenic not near genes chr3L 13342873 intergenic not near genes chr3L 13342971 intergenic not near genes chr3L_9_13340001 chr3L_13340001 RAL-913 2439 chr3L 13355545 13355567 chr3L 13355950 13355972 7 405 23.0 24.0 23.5 0.3 427 chr3L 13355545 intergenic not near genes chr3L 13355758 intergenic not near genes chr3L 13355972 intergenic Nplp2 + chr3L_7_13355001 chr3L_13355001 RAL-913 2440 chr3L 13357845 13357907 chr3L 13358015 13358077 13 170 26.5 26.5 26.5 0.5 232 chr3L 13357845 intergenic not near genes chr3L 13357961 intergenic not near genes chr3L 13358077 intergenic not near genes chr3L_13_13355001 chr3L_13355001 RAL-913 2441 chr3L 13361922 13361971 chr3L 13362065 13362115 9 144 27.0 24.0 25.5 0.3 193 chr3L 13361922 intergenic not near genes chr3L 13362018 intergenic not near genes chr3L 13362115 intergenic not near genes chr3L_9_13360001 chr3L_13360001 RAL-913 2442 chr3L 13364990 13365069 chr3L 13365125 13365197 19 128 7.5 2.0 4.8 3.3 207 chr3L 13364990 intergenic not near genes chr3L 13365094 intergenic not near genes chr3L 13365197 intergenic not near genes chr3L_19_13365001 chr3L_13365001 RAL-913 2443 chr3L 13374217 13374256 chr3L 13374351 13374395 6 138 29.0 30.5 29.8 0.2 178 chr3L 13374217 intergenic not near genes chr3L 13374306 intergenic not near genes chr3L 13374395 intergenic not near genes chr3L_6_13370001 chr3L_13370001 RAL-913 2444 chr3L 13375365 13375439 chr3L 13375525 13375588 7 158 22.0 21.5 21.8 0.3 223 chr3L 13375365 intergenic not near genes chr3L 13375476 intergenic not near genes chr3L 13375588 intergenic not near genes chr3L_7_13375001 chr3L_13375001 RAL-913 2445 chr3L 13379642 13379721 chr3L 13379862 13379944 11 221 0.5 7.5 4.0 2.2 302 chr3L 13379642 intron CG14111 + chr3L 13379793 intron CG14111 + chr3L 13379944 intron CG14111 + chr3L_11_13375001 chr3L_13375001 RAL-913 2446 chr3L 13392720 13392745 chr3L 13392853 13392878 5 133 28.0 22.5 25.2 0.2 158 chr3L 13392720 intergenic not near genes chr3L 13392799 intergenic not near genes chr3L 13392878 intergenic not near genes chr3L_5_13390001 chr3L_13390001 RAL-913 2447 chr3L 13400479 13400544 chr3L 13400605 13400670 12 126 13.0 13.5 13.2 0.8 191 chr3L 13400479 intron sens - chr3L 13400574 intron sens - chr3L 13400670 intron sens - chr3L_12_13400001 chr3L_13400001 RAL-913 2448 chr3L 13426917 13426986 chr3L 13429340 13429410 18 2424 37.0 47.0 42.0 0.4 2493 chr3L 13426917 intergenic CG14105 - chr3L 13428164 intergenic not near genes chr3L 13429410 3` UTR CG10713 - chr3L_18_13425001 chr3L_13425001 RAL-913 2449 chr3L 13454960 13455020 chr3L 13455105 13455170 9 148 24.5 18.0 21.2 0.4 210 chr3L 13454960 intron CG10738 + chr3L 13455065 intron CG10738 + chr3L 13455170 intron CG10738 + chr3L_9_13455001 chr3L_13455001 RAL-913 2450 chr3L 13498624 13498689 chr3L 13498755 13498825 14 134 16.5 3.5 10.0 1.3 201 chr3L 13498624 intron Tgi + chr3L 13498724 intron Tgi + chr3L 13498825 intron Tgi + chr3L_14_13495001 chr3L_13495001 RAL-913 2451 chr3L 13525114 13525178 chr3L 13532960 13532997 roo 33 7843 15.0 10.0 12.5 2.4 7883 chr3L 13525114 intergenic not near genes chr3L 13529056 intergenic not near genes chr3L 13532997 intergenic not near genes chr3L_33_13525001 chr3L_13525001 RAL-913 2452 chr3L 13574582 13574616 chr3L 13580141 13580177 Rt1c 6 5560 12.0 5.0 8.5 0.6 5595 chr3L 13574582 intron bru-3 - chr3L 13577380 intron bru-3 - chr3L 13580177 intron bru-3 - chr3L_6_13575001 chr3L_13575001 RAL-913 2453 chr3L 13595000 13595023 chr3L 13595115 13595145 5 125 17.5 19.0 18.2 0.3 145 chr3L 13595000 intron bru-3 - chr3L 13595072 intron bru-3 - chr3L 13595145 intron bru-3 - chr3L_5_13595001 chr3L_13595001 RAL-913 2454 chr3L 13595995 13596065 chr3L 13596160 13596194 18 162 7.0 4.5 5.8 2.6 199 chr3L 13595995 intron bru-3 - chr3L 13596094 intron bru-3 - chr3L 13596194 intron bru-3 - chr3L_18_13595001 chr3L_13595001 RAL-913 2455 chr3L 13629479 13629539 chr3L 13629638 13629697 14 159 13.5 14.0 13.8 0.9 218 chr3L 13629479 intron bru-3 - chr3L 13629588 intron bru-3 - chr3L 13629697 intron bru-3 - chr3L_14_13625001 chr3L_13625001 RAL-913 2456 chr3L 13668540 13668589 chr3L 13668668 13668711 9 126 25.5 20.5 23.0 0.4 171 chr3L 13668540 intron bru-3 - chr3L 13668626 intron bru-3 - chr3L 13668711 intron bru-3 - chr3L_9_13665001 chr3L_13665001 RAL-913 2457 chr3L 13677480 13677708 chr3L 13677607 13677891 28 130 1.5 10.5 6.0 4.0 411 chr3L 13677480 intron bru-3 - chr3L 13677686 intron bru-3 - chr3L 13677891 intron bru-3 - chr3L_28_13675001 chr3L_13675001 RAL-913 2458 chr3L 13677742 13677761 chr3L 13677948 13677967 5 206 4.5 17.5 11.0 0.4 225 chr3L 13677742 intron bru-3 - chr3L 13677854 intron bru-3 - chr3L 13677967 intron bru-3 - chr3L_5_13675001 chr3L_13675001 RAL-913 2459 chr3L 13684567 13684575 chr3L 13684694 13684702 5 127 7.5 3.5 5.5 0.8 135 chr3L 13684567 intron bru-3 - chr3L 13684634 intron bru-3 - chr3L 13684702 intron bru-3 - chr3L_5_13680001 chr3L_13680001 RAL-913 2460 chr3L 13703391 13703460 chr3L 13703527 13703595 20 135 18.0 16.5 17.2 1.1 204 chr3L 13703391 intron bru-3 - chr3L 13703493 intron bru-3 - chr3L 13703595 intron bru-3 - chr3L_20_13700001 chr3L_13700001 RAL-913 2461 chr3L 13722394 13722472 chr3L 13722522 13722600 25 126 12.5 15.5 14.0 1.7 206 chr3L 13722394 intron bru-3 - chr3L 13722497 intron bru-3 - chr3L 13722600 intron bru-3 - chr3L_25_13720001 chr3L_13720001 RAL-913 2462 chr3L 13739982 13740045 chr3L 13740125 13740176 10 140 8.5 10.5 9.5 1.0 194 chr3L 13739982 intron bru-3 - chr3L 13740079 intron bru-3 - chr3L 13740176 intron bru-3 - chr3L_10_13740001 chr3L_13740001 RAL-913 2463 chr3L 13745242 13745294 chr3L 13745381 13745419 7 137 19.0 18.5 18.8 0.4 177 chr3L 13745242 intron bru-3 - chr3L 13745330 intron bru-3 - chr3L 13745419 intron bru-3 - chr3L_7_13745001 chr3L_13745001 RAL-913 2464 chr3L 13756923 13756939 chr3L 13757052 13757068 7 129 19.5 17.0 18.2 0.4 145 chr3L 13756923 intron bru-3 - chr3L 13756996 intron bru-3 - chr3L 13757068 intron bru-3 - chr3L_7_13755001 chr3L_13755001 RAL-913 2465 chr3L 13756942 13756983 chr3L 13757049 13757112 12 127 16.5 17.0 16.8 0.7 170 chr3L 13756942 intron bru-3 - chr3L 13757027 intron bru-3 - chr3L 13757112 intron bru-3 - chr3L_12_13755001 chr3L_13755001 RAL-913 2466 chr3L 13759432 13759474 chr3L 13759628 13759670 7 196 23.5 30.5 27.0 0.2 238 chr3L 13759432 intron bru-3 - chr3L 13759551 intron bru-3 - chr3L 13759670 intron bru-3 - chr3L_7_13755001 chr3L_13755001 RAL-913 2467 chr3L 13768981 13769023 chr3L 13769120 13769162 11 139 16.5 18.5 17.5 0.6 181 chr3L 13768981 intron bru-3 - chr3L 13769072 intron bru-3 - chr3L 13769162 intron bru-3 - chr3L_11_13765001 chr3L_13765001 RAL-913 2468 chr3L 13786690 13786754 chr3L 13786831 13786895 10 141 20.0 22.0 21.0 0.5 205 chr3L 13786690 intron bru-3 - chr3L 13786792 intron bru-3 - chr3L 13786895 5` UTR bru-3 - chr3L_10_13785001 chr3L_13785001 RAL-913 2469 chr3L 13804499 13804568 chr3L 13822835 13822904 roo 40 18336 7.0 10.5 8.8 4.1 18405 chr3L 13804499 intergenic not near genes chr3L 13813702 intergenic not near genes chr3L 13822904 intergenic not near genes chr3L_40_13810001 chr3L_13810001 RAL-913 2470 chr3L 13837263 13837293 chr3L 13837390 13837420 7 127 19.5 30.5 25.0 0.3 157 chr3L 13837263 intergenic CG43184 + chr3L 13837342 intergenic CG43184 + chr3L 13837420 intergenic CG43184 + chr3L_7_13835001 chr3L_13835001 RAL-913 2471 chr3L 13841124 13841162 chr3L 13841265 13841299 6 140 5.5 18.5 12.0 0.5 175 chr3L 13841124 3` UTR CG8757 - chr3L 13841212 3` UTR CG8757 - chr3L 13841299 exon CG8757 - chr3L_6_13840001 chr3L_13840001 RAL-913 2472 chr3L 13843985 13844049 chr3L 13845828 13845892 12 1843 39.0 43.5 41.2 0.3 1907 chr3L 13843985 intron Tsp68C + chr3L 13844938 exon Tsp68C + chr3L 13845892 intergenic Hml + chr3L_12_13840001 chr3L_13840001 RAL-913 2473 chr3L 13876945 13877017 chr3L 13877077 13877149 20 130 3.0 7.0 5.0 3.3 204 chr3L 13876945 intron dysc - chr3L 13877047 intron dysc - chr3L 13877149 intron dysc - chr3L_20_13875001 chr3L_13875001 RAL-913 2474 chr3L 13884329 13884387 chr3L 13884470 13884528 21 140 7.0 2.0 4.5 3.8 199 chr3L 13884329 intron dysc - chr3L 13884428 intron dysc - chr3L 13884528 intron dysc - chr3L_21_13880001 chr3L_13880001 RAL-913 2475 chr3L 13886906 13886945 chr3L 13887032 13887071 5 126 17.5 10.5 14.0 0.3 165 chr3L 13886906 exon dysc - chr3L 13886988 intron dysc - chr3L 13887071 intron dysc - chr3L_5_13885001 chr3L_13885001 RAL-913 2476 chr3L 13901524 13901581 chr3L 13901651 13901708 11 126 15.5 13.0 14.2 0.7 184 chr3L 13901524 intron dysc - chr3L 13901616 intron dysc - chr3L 13901708 5` UTR dysc - chr3L_11_13900001 chr3L_13900001 RAL-913 2477 chr3L 13920369 13920431 chr3L 13920499 13920561 14 129 23.5 24.5 24.0 0.6 192 chr3L 13920369 intron Rgl - chr3L 13920465 intron Rgl - chr3L 13920561 intron Rgl - chr3L_14_13920001 chr3L_13920001 RAL-913 2478 chr3L 13931286 13931363 chr3L 13931441 13931467 12 149 26.0 27.5 26.8 0.4 181 chr3L 13931286 intron Gl + chr3L 13931376 intron Gl + chr3L 13931467 intron Gl + chr3L_12_13930001 chr3L_13930001 RAL-913 2479 chr3L 13936451 13936653 chr3L 13936580 13936838 19 152 8.5 4.0 6.2 2.6 387 chr3L 13936451 intergenic not near genes chr3L 13936644 intergenic not near genes chr3L 13936838 intergenic not near genes chr3L_19_13935001 chr3L_13935001 RAL-913 2480 chr3L 13988424 13988496 chr3L 13988595 13988667 19 171 22.5 24.0 23.2 0.8 243 chr3L 13988424 intron,exon CG17364 -,CG9040 + chr3L 13988546 intron,3` UTR CG17364 -,CG9040 + chr3L 13988667 intron CG17364 - chr3L_19_13985001 chr3L_13985001 RAL-913 2481 chr3L 13993961 13994015 chr3L 13994090 13994145 11 130 5.5 9.0 7.2 1.3 184 chr3L 13993961 intergenic 26-29-p + chr3L 13994053 intergenic 26-29-p + chr3L 13994145 intergenic 26-29-p + chr3L_11_13990001 chr3L_13990001 RAL-913 2482 chr3L 14105700 14105760 chr3L 14105836 14105896 13 135 27.0 23.5 25.2 0.5 196 chr3L 14105700 intron Sox21a - chr3L 14105798 intron Sox21a - chr3L 14105896 intron Sox21a - chr3L_13_14105001 chr3L_14105001 RAL-913 2483 chr3L 14107236 14107279 chr3L 14107342 14107406 6 121 17.0 12.0 14.5 0.4 170 chr3L 14107236 intron Sox21a - chr3L 14107321 intron Sox21a - chr3L 14107406 intron Sox21a - chr3L_6_14105001 chr3L_14105001 RAL-913 2484 chr3L 14118897 14118972 chr3L 14119040 14119115 19 131 21.5 16.0 18.8 1.0 218 chr3L 14118897 intron Sox21b - chr3L 14119006 intron Sox21b - chr3L 14119115 intron Sox21b - chr3L_19_14115001 chr3L_14115001 RAL-913 2485 chr3L 14129452 14129514 chr3L 14129572 14129649 10 131 10.5 12.5 11.5 0.8 197 chr3L 14129452 intron Sox21b - chr3L 14129550 intron Sox21b - chr3L 14129649 intron Sox21b - chr3L_10_14125001 chr3L_14125001 RAL-913 2486 chr3L 14141366 14141382 chr3L 14141503 14141519 5 137 13.0 0.0 6.5 0.7 153 chr3L 14141366 intergenic not near genes chr3L 14141442 intergenic not near genes chr3L 14141519 intergenic not near genes chr3L_5_14140001 chr3L_14140001 RAL-913 2487 chr3L 14144094 14144154 chr3L 14144222 14144282 23 127 23.0 15.0 19.0 1.1 188 chr3L 14144094 intergenic not near genes chr3L 14144188 intergenic not near genes chr3L 14144282 intergenic not near genes chr3L_23_14140001 chr3L_14140001 RAL-913 2488 chr3L 14168300 14168314 chr3L 14168431 14168445 7 131 15.5 22.0 18.8 0.4 145 chr3L 14168300 intergenic not near genes chr3L 14168372 intergenic not near genes chr3L 14168445 intergenic not near genes chr3L_7_14165001 chr3L_14165001 RAL-913 2489 chr3L 14174074 14174084 chr3L 14174200 14174210 7 126 35.0 26.5 30.8 0.2 136 chr3L 14174074 intergenic not near genes chr3L 14174142 intergenic not near genes chr3L 14174210 intergenic not near genes chr3L_7_14170001 chr3L_14170001 RAL-913 2490 chr3L 14194673 14194732 chr3L 14194799 14194859 26 126 5.5 0.5 3.0 6.5 186 chr3L 14194673 intron nuf + chr3L 14194766 intron nuf + chr3L 14194859 intron nuf + chr3L_26_14190001 chr3L_14190001 RAL-913 2491 chr3L 14196311 14196444 chr3L 14196451 14196579 22 136 7.0 9.0 8.0 2.4 268 chr3L 14196311 intron nuf + chr3L 14196445 intron nuf + chr3L 14196579 intron nuf + chr3L_22_14195001 chr3L_14195001 RAL-913 2492 chr3L 14211388 14211455 chr3L 14211516 14211583 11 128 25.5 28.5 27.0 0.4 195 chr3L 14211388 intron nuf + chr3L 14211486 intron nuf + chr3L 14211583 intron nuf + chr3L_11_14210001 chr3L_14210001 RAL-913 2493 chr3L 14214796 14214866 chr3L 14214922 14215001 10 127 23.5 26.0 24.8 0.4 205 chr3L 14214796 intron nuf + chr3L 14214898 intron nuf + chr3L 14215001 intron nuf + chr3L_10_14210001 chr3L_14210001 RAL-913 2494 chr3L 14234797 14234856 chr3L 14234944 14235003 21 147 22.0 17.0 19.5 1.0 206 chr3L 14234797 intergenic CG7924 +,CG34244 - chr3L 14234900 intergenic CG34244 -,CG7924 + chr3L 14235003 intergenic CG34244 -,CG7924 + chr3L_21_14230001 chr3L_14230001 RAL-913 2495 chr3L 14245534 14245594 chr3L 14245678 14245738 1360 21 143 11.5 15.0 13.2 1.5 204 chr3L 14245534 3` UTR CR44561 - chr3L 14245636 3` UTR CR44561 - chr3L 14245738 intergenic CR44561 -,CR44560 + chr3L_21_14245001 chr3L_14245001 RAL-913 2496 chr3L 14262536 14262554 chr3L 14262679 14262697 5 143 14.0 18.5 16.2 0.3 161 chr3L 14262536 intergenic not near genes chr3L 14262616 intergenic not near genes chr3L 14262697 intergenic not near genes chr3L_5_14260001 chr3L_14260001 RAL-913 2497 chr3L 14265145 14265210 chr3L 14265298 14265355 11 152 31.5 30.5 31.0 0.3 210 chr3L 14265145 intergenic not near genes chr3L 14265250 intergenic not near genes chr3L 14265355 intergenic not near genes chr3L_11_14265001 chr3L_14265001 RAL-913 2498 chr3L 14267325 14267385 chr3L 14271815 14271875 F-element 26 4490 11.5 16.0 13.8 1.8 4550 chr3L 14267325 intergenic not near genes chr3L 14269600 intergenic not near genes chr3L 14271875 intergenic not near genes chr3L_26_14265001 chr3L_14265001 RAL-913 2499 chr3L 14282538 14282607 chr3L 14282668 14282737 17 126 5.0 9.5 7.2 2.1 199 chr3L 14282538 intron fz + chr3L 14282638 intron fz + chr3L 14282737 intron fz + chr3L_17_14280001 chr3L_14280001 RAL-913 2500 chr3L 14294105 14294182 chr3L 14294250 14294321 18 145 10.5 20.0 15.2 1.1 216 chr3L 14294105 intron fz + chr3L 14294213 intron fz + chr3L 14294321 intron fz + chr3L_18_14290001 chr3L_14290001 RAL-913 2501 chr3L 14295941 14296005 chr3L 14296473 14296536 roo 24 533 12.0 13.5 12.8 1.7 595 chr3L 14295941 intron fz + chr3L 14296238 intron fz + chr3L 14296536 intron fz + chr3L_24_14295001 chr3L_14295001 RAL-913 2502 chr3L 14311994 14312046 chr3L 14316841 14316870 X-element 24 4855 3.5 6.0 4.8 4.1 4876 chr3L 14311994 exon fz + chr3L 14314432 intron fz + chr3L 14316870 intron fz + chr3L_24_14310001 chr3L_14310001 RAL-913 2503 chr3L 14325369 14325393 chr3L 14325559 14325583 5 190 23.0 20.5 21.8 0.2 214 chr3L 14325369 intron,intron fz +,CR45025 - chr3L 14325476 intron,intron fz +,CR45025 - chr3L 14325583 intron,intron fz +,CR45025 - chr3L_5_14325001 chr3L_14325001 RAL-913 2504 chr3L 14331410 14331483 chr3L 14331543 14331616 31 132 5.5 7.0 6.2 4.3 206 chr3L 14331410 intron fz + chr3L 14331513 intron fz + chr3L 14331616 intron fz + chr3L_31_14330001 chr3L_14330001 RAL-913 2505 chr3L 14341406 14341439 chr3L 14341591 14341624 11 184 0.0 13.0 6.5 1.5 218 chr3L 14341406 intron fz + chr3L 14341515 intron fz + chr3L 14341624 intron fz + chr3L_11_14340001 chr3L_14340001 RAL-913 2506 chr3L 14356472 14356550 chr3L 14356602 14356678 24 128 7.5 7.5 7.5 2.8 206 chr3L 14356472 intron fz + chr3L 14356575 intron fz + chr3L 14356678 intron fz + chr3L_24_14355001 chr3L_14355001 RAL-913 2507 chr3L 14362329 14362380 chr3L 14362464 14362476 6 128 13.0 17.5 15.2 0.4 147 chr3L 14362329 intron fz + chr3L 14362402 intron fz + chr3L 14362476 intron fz + chr3L_6_14360001 chr3L_14360001 RAL-913 2508 chr3L 14365599 14365674 chr3L 14365735 14365806 13 132 19.5 18.5 19.0 0.7 207 chr3L 14365599 intron fz + chr3L 14365702 intron fz + chr3L 14365806 intron fz + chr3L_13_14365001 chr3L_14365001 RAL-913 2509 chr3L 14385092 14385108 chr3L 14385230 14385246 5 138 15.5 20.0 17.8 0.3 154 chr3L 14385092 intergenic not near genes chr3L 14385169 intergenic not near genes chr3L 14385246 intergenic not near genes chr3L_5_14385001 chr3L_14385001 RAL-913 2510 chr3L 14395606 14395664 chr3L 14395760 14395818 12 152 17.0 18.0 17.5 0.6 212 chr3L 14395606 intergenic not near genes chr3L 14395712 intergenic not near genes chr3L 14395818 intergenic not near genes chr3L_12_14395001 chr3L_14395001 RAL-913 2511 chr3L 14399126 14399142 chr3L 14399265 14399281 8 139 32.0 7.0 19.5 0.4 155 chr3L 14399126 intergenic not near genes chr3L 14399204 intergenic not near genes chr3L 14399281 intergenic not near genes chr3L_8_14395001 chr3L_14395001 RAL-913 2512 chr3L 14411815 14411884 chr3L 14411944 14412013 21 129 20.0 21.0 20.5 1.0 198 chr3L 14411815 intron CG3919 + chr3L 14411914 intron CG3919 + chr3L 14412013 intron CG3919 + chr3L_21_14410001 chr3L_14410001 RAL-913 2513 chr3L 14437849 14437902 chr3L 14437993 14438046 13 142 24.5 26.5 25.5 0.5 197 chr3L 14437849 intron bbg - chr3L 14437948 intron bbg - chr3L 14438046 intron bbg - chr3L_13_14435001 chr3L_14435001 RAL-913 2514 chr3L 14455321 14455398 chr3L 14455452 14455527 6 130 30.0 29.0 29.5 0.2 206 chr3L 14455321 intron bbg - chr3L 14455424 intron bbg - chr3L 14455527 intron bbg - chr3L_6_14455001 chr3L_14455001 RAL-913 2515 chr3L 14462834 14462911 chr3L 14462972 14463049 10 138 23.5 24.0 23.8 0.4 215 chr3L 14462834 intron bbg - chr3L 14462942 intron bbg - chr3L 14463049 intron bbg - chr3L_10_14460001 chr3L_14460001 RAL-913 2516 chr3L 14468409 14468478 chr3L 14473665 14473732 copia 29 5256 8.0 9.5 8.8 3.0 5323 chr3L 14468409 intron bbg - chr3L 14471070 intron bbg - chr3L 14473732 intron bbg - chr3L_29_14470001 chr3L_14470001 RAL-913 2517 chr3L 14485971 14486138 chr3L 14486102 14486265 13 130 16.0 3.5 9.8 1.2 294 chr3L 14485971 intron bbg - chr3L 14486118 intron bbg - chr3L 14486265 intron bbg - chr3L_13_14485001 chr3L_14485001 RAL-913 2518 chr3L 14502303 14502344 chr3L 14502493 14502534 7 190 30.0 25.0 27.5 0.2 231 chr3L 14502303 intron bbg - chr3L 14502418 intron bbg - chr3L 14502534 intron bbg - chr3L_7_14500001 chr3L_14500001 RAL-913 2519 chr3L 14522061 14522127 chr3L 14522210 14522276 16 149 22.0 14.5 18.2 0.8 215 chr3L 14522061 intron bbg - chr3L 14522168 intron bbg - chr3L 14522276 intron bbg - chr3L_16_14520001 chr3L_14520001 RAL-913 2520 chr3L 14534712 14534754 chr3L 14534839 14534881 12 127 5.0 3.5 4.2 2.3 169 chr3L 14534712 intron bbg - chr3L 14534796 intron bbg - chr3L 14534881 intron bbg - chr3L_12_14530001 chr3L_14530001 RAL-913 2521 chr3L 14537286 14537292 chr3L 14537430 14537436 4 144 27.0 24.5 25.8 0.1 150 chr3L 14537286 intergenic CG43246 +,Mpcp + chr3L 14537361 intergenic CG43246 +,Mpcp + chr3L 14537436 intergenic CG43246 +,Mpcp + chr3L_4_14535001 chr3L_14535001 RAL-913 2522 chr3L 14546573 14546816 chr3L 14546704 14546947 26 135 2.5 10.0 6.2 3.6 374 chr3L 14546573 intron CG9238 - chr3L 14546760 intron CG9238 - chr3L 14546947 intron CG9238 - chr3L_26_14545001 chr3L_14545001 RAL-913 2523 chr3L 14555458 14555510 chr3L 14555629 14555681 15 171 31.0 29.0 30.0 0.5 223 chr3L 14555458 intergenic not near genes chr3L 14555570 intergenic not near genes chr3L 14555681 intergenic not near genes chr3L_15_14555001 chr3L_14555001 RAL-913 2524 chr3L 14579553 14579626 chr3L 14579708 14579778 13 152 28.5 27.0 27.8 0.5 225 chr3L 14579553 intergenic not near genes chr3L 14579666 intergenic not near genes chr3L 14579778 intergenic not near genes chr3L_13_14575001 chr3L_14575001 RAL-913 2525 chr3L 14583034 14583071 chr3L 14583160 14583197 8 126 26.5 26.0 26.2 0.3 163 chr3L 14583034 intergenic HGTX - chr3L 14583116 intergenic HGTX - chr3L 14583197 intergenic HGTX - chr3L_8_14580001 chr3L_14580001 RAL-913 2526 chr3L 14584120 14584174 chr3L 14584257 14584291 8 134 26.5 25.0 25.8 0.3 171 chr3L 14584120 intron HGTX - chr3L 14584206 intron HGTX - chr3L 14584291 intron HGTX - chr3L_8_14580001 chr3L_14580001 RAL-913 2527 chr3L 14585564 14585632 chr3L 14585692 14585745 21 127 16.5 15.0 15.8 1.2 181 chr3L 14585564 intron HGTX - chr3L 14585654 intron HGTX - chr3L 14585745 intron HGTX - chr3L_21_14585001 chr3L_14585001 RAL-913 2528 chr3L 14596061 14596073 chr3L 14596191 14596203 4 130 8.5 8.5 8.5 0.4 142 chr3L 14596061 exon HGTX - chr3L 14596132 intron HGTX - chr3L 14596203 intron HGTX - chr3L_4_14595001 chr3L_14595001 RAL-913 2529 chr3L 14602923 14603083 chr3L 14603061 14603210 17 137 18.0 18.5 18.2 0.9 287 chr3L 14602923 intergenic not near genes chr3L 14603066 intergenic not near genes chr3L 14603210 intergenic not near genes chr3L_17_14600001 chr3L_14600001 RAL-913 2530 chr3L 14611407 14611477 chr3L 14611554 14611624 11 147 15.5 10.5 13.0 0.8 217 chr3L 14611407 intergenic not near genes chr3L 14611516 intergenic not near genes chr3L 14611624 intergenic not near genes chr3L_11_14610001 chr3L_14610001 RAL-913 2531 chr3L 14617164 14617226 chr3L 14617314 14617376 10 150 24.0 23.5 23.8 0.4 212 chr3L 14617164 intron shd + chr3L 14617270 intron shd + chr3L 14617376 intron shd + chr3L_10_14615001 chr3L_14615001 RAL-913 2532 chr3L 14627189 14627217 chr3L 14627326 14627354 9 137 16.0 20.5 18.2 0.5 165 chr3L 14627189 intron CG9628 + chr3L 14627272 intron CG9628 + chr3L 14627354 exon CG9628 + chr3L_9_14625001 chr3L_14625001 RAL-913 2533 chr3L 14633740 14633811 chr3L 14633886 14633957 15 146 23.0 17.5 20.2 0.7 217 chr3L 14633740 intron dlp + chr3L 14633848 intron dlp + chr3L 14633957 intron dlp + chr3L_15_14630001 chr3L_14630001 RAL-913 2534 chr3L 14635660 14635732 chr3L 14635789 14635860 7 128 24.0 26.5 25.2 0.3 200 chr3L 14635660 intron dlp + chr3L 14635760 intron dlp + chr3L 14635860 intron dlp + chr3L_7_14635001 chr3L_14635001 RAL-913 2535 chr3L 14646913 14646976 chr3L 14647040 14647094 11 124 7.5 7.5 7.5 1.3 181 chr3L 14646913 intron dlp + chr3L 14647004 intron dlp + chr3L 14647094 intron dlp + chr3L_11_14645001 chr3L_14645001 RAL-913 2536 chr3L 14702005 14702011 chr3L 14702134 14702138 6 129 9.0 17.0 13.0 0.4 133 chr3L 14702005 intron ome + chr3L 14702072 intron ome + chr3L 14702138 intron ome + chr3L_6_14700001 chr3L_14700001 RAL-913 2537 chr3L 14702012 14702020 chr3L 14702128 14702149 8 127 6.5 15.5 11.0 0.7 137 chr3L 14702012 intron ome + chr3L 14702080 intron ome + chr3L 14702149 intron ome + chr3L_8_14700001 chr3L_14700001 RAL-913 2538 chr3L 14704516 14704570 chr3L 14704696 14704750 9 180 30.0 30.5 30.2 0.3 234 chr3L 14704516 intron ome + chr3L 14704633 intron ome + chr3L 14704750 intron ome + chr3L_9_14700001 chr3L_14700001 RAL-913 2539 chr3L 14721151 14721169 chr3L 14723044 14723061 Rt1c 5 1890 16.0 10.5 13.2 0.4 1910 chr3L 14721151 intron ome + chr3L 14722106 intron ome + chr3L 14723061 intron ome + chr3L_5_14720001 chr3L_14720001 RAL-913 2540 chr3L 14721172 14721180 chr3L 14723039 14723073 Rt1c 5 1885 14.5 8.5 11.5 0.4 1901 chr3L 14721172 intron ome + chr3L 14722122 intron ome + chr3L 14723073 intron ome + chr3L_5_14720001 chr3L_14720001 RAL-913 2541 chr3L 14721182 14721200 chr3L 14723029 14723093 Rt1c 5 1871 10.0 6.5 8.2 0.5 1911 chr3L 14721182 intron ome + chr3L 14722138 intron ome + chr3L 14723093 intron ome + chr3L_5_14720001 chr3L_14720001 RAL-913 2542 chr3L 14724774 14724837 chr3L 14724908 14724971 9 134 15.5 18.0 16.8 0.5 197 chr3L 14724774 intron ome + chr3L 14724872 intron ome + chr3L 14724971 intron ome + chr3L_9_14720001 chr3L_14720001 RAL-913 2543 chr3L 14725524 14725613 chr3L 14728587 14728657 Doc 30 3052 0.0 7.5 3.8 6.2 3133 chr3L 14725524 intron ome + chr3L 14727090 intron ome + chr3L 14728657 intron ome + chr3L_30_14725001 chr3L_14725001 RAL-913 2544 chr3L 14738886 14738950 chr3L 14739019 14739084 10 133 22.0 25.5 23.8 0.4 198 chr3L 14738886 intron ome + chr3L 14738985 intron ome + chr3L 14739084 intron ome + chr3L_10_14735001 chr3L_14735001 RAL-913 2545 chr3L 14809369 14809421 chr3L 14809664 14809716 8 295 29.0 21.5 25.2 0.3 347 chr3L 14809369 intron CG17839 + chr3L 14809542 intron CG17839 + chr3L 14809716 intron CG17839 + chr3L_8_14805001 chr3L_14805001 RAL-913 2546 chr3L 14825118 14825144 chr3L 14832895 14832921 Stalker2 7 7777 10.0 18.5 14.2 0.5 7803 chr3L 14825118 intron CG17839 + chr3L 14829020 intron CG17839 + chr3L 14832921 intron CG17839 + chr3L_7_14825001 chr3L_14825001 RAL-913 2547 chr3L 14844212 14844286 chr3L 14844353 14844426 21 141 15.0 19.5 17.2 1.2 214 chr3L 14844212 intron CG17839 + chr3L 14844319 intron CG17839 + chr3L 14844426 intron CG17839 + chr3L_21_14840001 chr3L_14840001 RAL-913 2548 chr3L 14845119 14845158 chr3L 14845409 14845448 9 292 45.5 47.5 46.5 0.2 329 chr3L 14845119 intron CG17839 + chr3L 14845284 intron CG17839 + chr3L 14845448 intron CG17839 + chr3L_9_14845001 chr3L_14845001 RAL-913 2549 chr3L 14845117 14845190 chr3L 14845449 14845480 6 297 48.0 41.0 44.5 0.1 363 chr3L 14845117 intron CG17839 + chr3L 14845298 intron CG17839 + chr3L 14845480 intron CG17839 + chr3L_6_14845001 chr3L_14845001 RAL-913 2550 chr3L 14849142 14849205 chr3L 14849288 14849351 12 143 22.5 24.5 23.5 0.5 209 chr3L 14849142 intron CG17839 + chr3L 14849246 intron CG17839 + chr3L 14849351 intron CG17839 + chr3L_12_14845001 chr3L_14845001 RAL-913 2551 chr3L 14883418 14883457 chr3L 14883551 14883590 7 133 24.5 25.0 24.8 0.3 172 chr3L 14883418 intergenic not near genes chr3L 14883504 intergenic not near genes chr3L 14883590 intergenic not near genes chr3L_7_14880001 chr3L_14880001 RAL-913 2552 chr3L 14901281 14901345 chr3L 14901424 14901489 9 141 29.5 29.0 29.2 0.3 208 chr3L 14901281 intergenic not near genes chr3L 14901385 intergenic not near genes chr3L 14901489 intergenic not near genes chr3L_9_14900001 chr3L_14900001 RAL-913 2553 chr3L 14906836 14906897 chr3L 14906975 14907042 19 144 30.5 23.5 27.0 0.7 206 chr3L 14906836 intron DCX-EMAP + chr3L 14906939 intron DCX-EMAP + chr3L 14907042 intron DCX-EMAP + chr3L_19_14905001 chr3L_14905001 RAL-913 2554 chr3L 14911000 14911054 chr3L 14911128 14911182 12 128 20.0 28.0 24.0 0.5 182 chr3L 14911000 intron DCX-EMAP + chr3L 14911091 intron DCX-EMAP + chr3L 14911182 intron DCX-EMAP + chr3L_12_14910001 chr3L_14910001 RAL-913 2555 chr3L 14912143 14912210 chr3L 14912275 14912326 29 131 12.0 9.0 10.5 2.5 183 chr3L 14912143 intron DCX-EMAP + chr3L 14912234 intron DCX-EMAP + chr3L 14912326 intron DCX-EMAP + chr3L_29_14910001 chr3L_14910001 RAL-913 2556 chr3L 14922067 14922133 chr3L 14922225 14922290 16 158 17.0 17.0 17.0 0.9 223 chr3L 14922067 intron DCX-EMAP + chr3L 14922178 intron DCX-EMAP + chr3L 14922290 intron DCX-EMAP + chr3L_16_14920001 chr3L_14920001 RAL-913 2557 chr3L 14933403 14933444 chr3L 14933535 14933576 5 132 7.0 10.0 8.5 0.5 173 chr3L 14933403 intron DCX-EMAP + chr3L 14933490 intron DCX-EMAP + chr3L 14933576 intron DCX-EMAP + chr3L_5_14930001 chr3L_14930001 RAL-913 2558 chr3L 14954321 14954375 chr3L 14956040 14956094 transib2 27 1719 12.0 7.5 9.8 2.5 1773 chr3L 14954321 intergenic not near genes chr3L 14955208 intergenic not near genes chr3L 14956094 intergenic not near genes chr3L_27_14955001 chr3L_14955001 RAL-913 2559 chr3L 14954376 14954387 chr3L 14956038 14956106 transib2 6 1710 9.5 7.0 8.2 0.7 1730 chr3L 14954376 intergenic not near genes chr3L 14955241 intergenic not near genes chr3L 14956106 intergenic not near genes chr3L_6_14955001 chr3L_14955001 RAL-913 2560 chr3L 14957399 14957614 chr3L 14957536 14957779 10 139 1.5 1.5 1.5 4.0 380 chr3L 14957399 intergenic not near genes chr3L 14957589 intergenic not near genes chr3L 14957779 intergenic not near genes chr3L_10_14955001 chr3L_14955001 RAL-913 2561 chr3L 14962245 14962304 chr3L 14962375 14962434 15 130 16.5 14.0 15.2 0.9 189 chr3L 14962245 intergenic not near genes chr3L 14962340 intergenic not near genes chr3L 14962434 intergenic not near genes chr3L_15_14960001 chr3L_14960001 RAL-913 2562 chr3L 14970757 14970765 chr3L 14971119 14971127 F-element 7 362 0.0 18.0 9.0 0.7 370 chr3L 14970757 intergenic Tom + chr3L 14970942 intergenic not near genes chr3L 14971127 intergenic not near genes chr3L_7_14970001 chr3L_14970001 RAL-913 2563 chr3L 14974726 14974799 chr3L 14974863 14974936 11 135 20.0 20.5 20.2 0.5 210 chr3L 14974726 intergenic Ocho + chr3L 14974831 intergenic Ocho + chr3L 14974936 5` UTR Ocho + chr3L_11_14970001 chr3L_14970001 RAL-913 2564 chr3L 15048322 15048355 chr3L 15048451 15048484 7 129 31.0 29.5 30.2 0.2 162 chr3L 15048322 intron Sytbeta - chr3L 15048403 intron Sytbeta - chr3L 15048484 intron Sytbeta - chr3L_7_15045001 chr3L_15045001 RAL-913 2565 chr3L 15056692 15056713 chr3L 15056906 15056917 Transib-N1_DM 7 212 0.0 13.0 6.5 0.9 225 chr3L 15056692 intron Sytbeta - chr3L 15056804 intron Sytbeta - chr3L 15056917 intron Sytbeta - chr3L_7_15055001 chr3L_15055001 RAL-913 2566 chr3L 15062141 15062185 chr3L 15062285 15062329 7 144 13.5 23.0 18.2 0.4 188 chr3L 15062141 intron Sytbeta - chr3L 15062235 intron,3` UTR Sytbeta -,CR43684 - chr3L 15062329 intron,3` UTR Sytbeta -,CR43684 - chr3L_7_15060001 chr3L_15060001 RAL-913 2567 chr3L 15085004 15085078 chr3L 15086220 15086294 1360 39 1214 14.0 10.5 12.2 3.0 1290 chr3L 15085004 intron cp309 - chr3L 15085649 intron cp309 - chr3L 15086294 intron cp309 - chr3L_39_15085001 chr3L_15085001 RAL-913 2568 chr3L 15094928 15094960 chr3L 15095074 15095106 13 146 14.5 6.5 10.5 1.1 178 chr3L 15094928 intergenic cp309 -,CG6945 -,Aats-gly + chr3L 15095017 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095106 intergenic Aats-gly +,cp309 -,CG6945 - chr3L_13_15095001 chr3L_15095001 RAL-913 2569 chr3L 15146116 15146172 chr3L 15146243 15146311 8 128 10.0 25.0 17.5 0.4 195 chr3L 15146116 3` UTR Pex3 + chr3L 15146214 3` UTR Pex3 + chr3L 15146311 3` UTR Pex3 + chr3L_8_15145001 chr3L_15145001 RAL-913 2570 chr3L 15151175 15151238 chr3L 15151409 15151472 28 233 20.0 24.0 22.0 1.2 297 chr3L 15151175 intron FucTA + chr3L 15151324 intron FucTA + chr3L 15151472 exon FucTA + chr3L_28_15150001 chr3L_15150001 RAL-913 2571 chr3L 15164014 15164072 chr3L 15164349 15164378 6 333 15.5 10.0 12.8 0.4 364 chr3L 15164014 intergenic CG7011 - chr3L 15164196 intergenic not near genes chr3L 15164378 intergenic not near genes chr3L_6_15160001 chr3L_15160001 RAL-913 2572 chr3L 15164975 15165041 chr3L 15165123 15165190 13 148 15.5 12.5 14.0 0.9 215 chr3L 15164975 intergenic not near genes chr3L 15165082 intergenic not near genes chr3L 15165190 intergenic not near genes chr3L_13_15165001 chr3L_15165001 RAL-913 2573 chr3L 15177298 15177363 chr3L 15177433 15177498 14 134 24.0 23.5 23.8 0.6 200 chr3L 15177298 intergenic not near genes chr3L 15177398 intergenic not near genes chr3L 15177498 intergenic not near genes chr3L_14_15175001 chr3L_15175001 RAL-913 2574 chr3L 15184913 15184969 chr3L 15185058 15185124 9 154 19.0 21.0 20.0 0.4 211 chr3L 15184913 intergenic not near genes chr3L 15185018 intergenic not near genes chr3L 15185124 intergenic not near genes chr3L_9_15185001 chr3L_15185001 RAL-913 2575 chr3L 15209015 15209044 chr3L 15209151 15209180 6 136 21.5 2.0 11.8 0.5 165 chr3L 15209015 intergenic CG6888 + chr3L 15209098 intergenic not near genes chr3L 15209180 intergenic not near genes chr3L_6_15205001 chr3L_15205001 RAL-913 2576 chr3L 15219700 15219770 chr3L 15219832 15219902 14 132 16.0 18.0 17.0 0.8 202 chr3L 15219700 intergenic not near genes chr3L 15219801 intergenic not near genes chr3L 15219902 intergenic not near genes chr3L_14_15215001 chr3L_15215001 RAL-913 2577 chr3L 15228721 15228800 chr3L 15228997 15229069 10 274 13.0 22.5 17.8 0.5 348 chr3L 15228721 intergenic not near genes chr3L 15228895 intergenic not near genes chr3L 15229069 intergenic not near genes chr3L_10_15225001 chr3L_15225001 RAL-913 2578 chr3L 15233514 15233575 chr3L 15233645 15233699 13 130 31.5 29.0 30.2 0.4 185 chr3L 15233514 intergenic not near genes chr3L 15233606 intergenic not near genes chr3L 15233699 intergenic not near genes chr3L_13_15230001 chr3L_15230001 RAL-913 2579 chr3L 15248975 15248978 chr3L 15249102 15249105 4 127 15.5 17.5 16.5 0.2 130 chr3L 15248975 intergenic not near genes chr3L 15249040 intergenic not near genes chr3L 15249105 intergenic not near genes chr3L_4_15245001 chr3L_15245001 RAL-913 2580 chr3L 15257382 15257451 chr3L 15257645 15257714 15 263 3.0 2.5 2.8 3.9 332 chr3L 15257382 intergenic not near genes chr3L 15257548 intergenic not near genes chr3L 15257714 intergenic not near genes chr3L_15_15255001 chr3L_15255001 RAL-913 2581 chr3L 15262623 15262649 chr3L 15262757 15262783 6 134 23.0 28.5 25.8 0.2 160 chr3L 15262623 intergenic not near genes chr3L 15262703 intergenic not near genes chr3L 15262783 intergenic not near genes chr3L_6_15260001 chr3L_15260001 RAL-913 2582 chr3L 15264031 15264086 chr3L 15264158 15264215 16 128 0.0 0.0 0.0 16.0 184 chr3L 15264031 intergenic not near genes chr3L 15264123 intergenic not near genes chr3L 15264215 intergenic not near genes chr3L_16_15260001 chr3L_15260001 RAL-913 2583 chr3L 15265404 15265420 chr3L 15265611 15265627 5 207 11.0 9.5 10.2 0.4 223 chr3L 15265404 intergenic not near genes chr3L 15265516 intergenic not near genes chr3L 15265627 intergenic not near genes chr3L_5_15265001 chr3L_15265001 RAL-913 2584 chr3L 4493359 4493362 chr3L 15267633 15267636 4 10774274 16.5 23.0 19.8 0.2 10774277 chr3L 4493359 intergenic not near genes chr3L 9880498 exon CG34382 + chr3L 15267636 intergenic not near genes chr3L_4_9880001 chr3L_9880001 RAL-913 2585 chr3L 15273290 15273351 chr3L 15273486 15273547 9 196 18.0 18.5 18.2 0.5 257 chr3L 15273290 intergenic not near genes chr3L 15273418 intergenic not near genes chr3L 15273547 intergenic not near genes chr3L_9_15270001 chr3L_15270001 RAL-913 2586 chr3L 15286702 15286706 chr3L 15286833 15286837 6 131 25.0 7.0 16.0 0.4 135 chr3L 15286702 intergenic not near genes chr3L 15286770 intergenic not near genes chr3L 15286837 intergenic not near genes chr3L_6_15285001 chr3L_15285001 RAL-913 2587 chr3L 15286707 15286769 chr3L 15286832 15286900 28 129 11.5 7.0 9.2 2.7 193 chr3L 15286707 intergenic not near genes chr3L 15286804 intergenic not near genes chr3L 15286900 intergenic not near genes chr3L_28_15285001 chr3L_15285001 RAL-913 2588 chr3L 15295727 15295791 chr3L 15298620 15298684 gypsy5 31 2892 8.5 11.0 9.8 2.9 2957 chr3L 15295727 intergenic not near genes chr3L 15297206 intergenic not near genes chr3L 15298684 intergenic Best4 + chr3L_31_15295001 chr3L_15295001 RAL-913 2589 chr3L 15347265 15347437 chr3L 15347405 15347547 28 129 13.0 10.0 11.5 2.2 282 chr3L 15347265 intergenic not near genes chr3L 15347406 intergenic not near genes chr3L 15347547 intergenic not near genes chr3L_28_15345001 chr3L_15345001 RAL-913 2590 chr3L 15348068 15348141 chr3L 15348272 15348349 14 208 17.5 14.0 15.8 0.8 281 chr3L 15348068 intergenic not near genes chr3L 15348208 intergenic not near genes chr3L 15348349 intergenic not near genes chr3L_14_15345001 chr3L_15345001 RAL-913 2591 chr3L 15358321 15358383 chr3L 15358502 15358563 20 181 20.5 19.5 20.0 1.0 242 chr3L 15358321 intergenic not near genes chr3L 15358442 intergenic not near genes chr3L 15358563 intergenic not near genes chr3L_20_15355001 chr3L_15355001 RAL-913 2592 chr3L 15383921 15383947 chr3L 15384351 15384377 6 428 20.0 25.0 22.5 0.3 456 chr3L 15383921 intergenic not near genes chr3L 15384149 intergenic not near genes chr3L 15384377 intergenic not near genes chr3L_6_15380001 chr3L_15380001 RAL-913 2593 chr3L 15383948 15383989 chr3L 15384349 15384419 14 425 13.0 25.0 19.0 0.7 471 chr3L 15383948 intergenic not near genes chr3L 15384184 intergenic not near genes chr3L 15384419 intergenic not near genes chr3L_14_15380001 chr3L_15380001 RAL-913 2594 chr3L 15384912 15384980 chr3L 15385090 15385157 23 173 18.5 18.0 18.2 1.2 245 chr3L 15384912 intergenic not near genes chr3L 15385034 intergenic not near genes chr3L 15385157 intergenic not near genes chr3L_23_15385001 chr3L_15385001 RAL-913 2595 chr3L 15405760 15406043 chr3L 15405892 15406176 16 132 18.0 14.5 16.2 0.9 416 chr3L 15405760 intergenic not near genes chr3L 15405968 intergenic not near genes chr3L 15406176 intergenic not near genes chr3L_16_15405001 chr3L_15405001 RAL-913 2596 chr3L 15420310 15420598 chr3L 15420439 15420731 8 131 31.0 25.5 28.2 0.3 421 chr3L 15420310 intergenic not near genes chr3L 15420520 intergenic not near genes chr3L 15420731 intergenic not near genes chr3L_8_15420001 chr3L_15420001 RAL-913 2597 chr3L 15423715 15423784 chr3L 15426609 15426678 opus 39 2894 5.5 3.5 4.5 7.1 2963 chr3L 15423715 intergenic not near genes chr3L 15425196 intergenic not near genes chr3L 15426678 intergenic not near genes chr3L_39_15425001 chr3L_15425001 RAL-913 2598 chr3L 15430008 15430073 chr3L 15430138 15430204 10 127 24.5 22.5 23.5 0.4 196 chr3L 15430008 intergenic not near genes chr3L 15430106 intergenic not near genes chr3L 15430204 intergenic not near genes chr3L_10_15430001 chr3L_15430001 RAL-913 2599 chr3L 15430575 15430640 chr3L 15430701 15430766 8 126 26.5 21.5 24.0 0.3 191 chr3L 15430575 intergenic not near genes chr3L 15430670 intergenic not near genes chr3L 15430766 intergenic not near genes chr3L_8_15430001 chr3L_15430001 RAL-913 2600 chr3L 15443542 15443611 chr3L 15443667 15443738 15 127 27.5 22.0 24.8 0.6 196 chr3L 15443542 intergenic not near genes chr3L 15443640 intergenic not near genes chr3L 15443738 intergenic not near genes chr3L_15_15440001 chr3L_15440001 RAL-913 2601 chr3L 15465989 15466136 chr3L 15466121 15466282 10 143 17.0 21.0 19.0 0.5 293 chr3L 15465989 intergenic not near genes chr3L 15466136 intergenic not near genes chr3L 15466282 intergenic not near genes chr3L_10_15465001 chr3L_15465001 RAL-913 2602 chr3L 15474638 15474689 chr3L 15474827 15474878 17 187 7.5 4.5 6.0 2.4 240 chr3L 15474638 intergenic not near genes chr3L 15474758 intergenic not near genes chr3L 15474878 intergenic not near genes chr3L_17_15470001 chr3L_15470001 RAL-913 2603 chr3L 15493264 15493346 chr3L 15493409 15493491 15 145 10.0 3.0 6.5 2.0 227 chr3L 15493264 exon CG12355 - chr3L 15493378 intron CG12355 - chr3L 15493491 5` UTR CG12355 - chr3L_15_15490001 chr3L_15490001 RAL-913 2604 chr3L 15541579 15541649 chr3L 15541720 15541790 26 141 6.5 0.5 3.5 5.8 211 chr3L 15541579 intron CrebA + chr3L 15541684 intron CrebA + chr3L 15541790 intron CrebA + chr3L_26_15540001 chr3L_15540001 RAL-913 2605 chr3L 15552261 15552296 chr3L 15552383 15552423 7 121 25.0 33.5 29.2 0.2 162 chr3L 15552261 3` UTR CrebA + chr3L 15552342 3` UTR CrebA + chr3L 15552423 3` UTR CrebA + chr3L_7_15550001 chr3L_15550001 RAL-913 2606 chr3L 15554879 15554943 chr3L 15556716 15556780 S-element 12 1837 16.0 28.0 22.0 0.5 1901 chr3L 15554879 intron AGO2 + chr3L 15555830 intron AGO2 + chr3L 15556780 intron AGO2 + chr3L_12_15555001 chr3L_15555001 RAL-913 2607 chr3L 15600149 15600197 chr3L 15600300 15600348 21 151 3.5 9.5 6.5 2.8 199 chr3L 15600149 intron RhoGAP71E + chr3L 15600248 intron RhoGAP71E + chr3L 15600348 intron RhoGAP71E + chr3L_21_15600001 chr3L_15600001 RAL-913 2608 chr3L 15615896 15615942 chr3L 15616042 15616088 9 146 26.5 26.5 26.5 0.3 192 chr3L 15615896 intron comm3 - chr3L 15615992 intron comm3 - chr3L 15616088 intron comm3 - chr3L_9_15615001 chr3L_15615001 RAL-913 2609 chr3L 15617767 15617806 chr3L 15618007 15618051 4 244 0.0 18.5 9.2 0.4 284 chr3L 15617767 intron comm3 - chr3L 15617909 intron comm3 - chr3L 15618051 intron comm3 - chr3L_4_15615001 chr3L_15615001 RAL-913 2610 chr3L 15634653 15634729 chr3L 15634795 15634876 16 144 29.0 23.5 26.2 0.6 223 chr3L 15634653 intron comm3 - chr3L 15634764 intron comm3 - chr3L 15634876 intron comm3 - chr3L_16_15630001 chr3L_15630001 RAL-913 2611 chr3L 15637147 15637186 chr3L 15637273 15637312 10 125 19.5 16.5 18.0 0.5 165 chr3L 15637147 intron comm3 - chr3L 15637230 intron comm3 - chr3L 15637312 intron comm3 - chr3L_10_15635001 chr3L_15635001 RAL-913 2612 chr3L 15651140 15651185 chr3L 15651273 15651318 20 133 27.5 28.5 28.0 0.7 178 chr3L 15651140 exon CG43084 + chr3L 15651229 exon CG43084 + chr3L 15651318 exon CG43084 + chr3L_20_15650001 chr3L_15650001 RAL-913 2613 chr3L 15695941 15696003 chr3L 15696069 15696130 11 128 26.0 26.5 26.2 0.4 189 chr3L 15695941 intergenic not near genes chr3L 15696036 intergenic not near genes chr3L 15696130 intergenic not near genes chr3L_11_15695001 chr3L_15695001 RAL-913 2614 chr3L 15715034 15715076 chr3L 15715153 15715197 10 120 18.5 18.0 18.2 0.5 163 chr3L 15715034 intergenic not near genes chr3L 15715116 intergenic not near genes chr3L 15715197 intergenic not near genes chr3L_10_15715001 chr3L_15715001 RAL-913 2615 chr3L 15737329 15737333 chr3L 15737469 15737473 4 140 28.5 17.5 23.0 0.2 144 chr3L 15737329 intergenic not near genes chr3L 15737401 intergenic not near genes chr3L 15737473 intergenic not near genes chr3L_4_15735001 chr3L_15735001 RAL-913 2616 chr3L 15737335 15737389 chr3L 15737468 15737529 14 139 16.5 17.5 17.0 0.8 194 chr3L 15737335 intergenic not near genes chr3L 15737432 intergenic not near genes chr3L 15737529 intergenic not near genes chr3L_14_15735001 chr3L_15735001 RAL-913 2617 chr3L 15742415 15742480 chr3L 15742555 15742624 9 142 21.0 25.0 23.0 0.4 209 chr3L 15742415 intergenic not near genes chr3L 15742520 intergenic not near genes chr3L 15742624 intergenic not near genes chr3L_9_15740001 chr3L_15740001 RAL-913 2618 chr3L 15756845 15756909 chr3L 15756978 15757041 10 128 5.5 0.0 2.8 2.6 196 chr3L 15756845 intergenic not near genes chr3L 15756943 intergenic not near genes chr3L 15757041 intergenic not near genes chr3L_10_15755001 chr3L_15755001 RAL-913 2619 chr3L 15760639 15760707 chr3L 15760774 15760840 11 131 8.5 1.0 4.8 1.9 201 chr3L 15760639 intergenic not near genes chr3L 15760740 intergenic not near genes chr3L 15760840 intergenic not near genes chr3L_11_15760001 chr3L_15760001 RAL-913 2620 chr3L 15769111 15769124 chr3L 15769252 15769265 7 141 0.0 14.0 7.0 0.9 154 chr3L 15769111 intergenic not near genes chr3L 15769188 intergenic not near genes chr3L 15769265 intergenic not near genes chr3L_7_15765001 chr3L_15765001 RAL-913 2621 chr3L 15774863 15774885 chr3L 15775003 15775025 10 140 8.5 11.5 10.0 0.9 162 chr3L 15774863 intergenic not near genes chr3L 15774944 intergenic not near genes chr3L 15775025 intergenic not near genes chr3L_10_15770001 chr3L_15770001 RAL-913 2622 chr3L 15778474 15778546 chr3L 15778675 15778747 13 201 19.0 24.0 21.5 0.6 273 chr3L 15778474 intergenic not near genes chr3L 15778610 intergenic not near genes chr3L 15778747 intergenic not near genes chr3L_13_15775001 chr3L_15775001 RAL-913 2623 chr3L 15781605 15781639 chr3L 15781786 15781836 7 190 16.5 0.0 8.2 0.8 231 chr3L 15781605 intergenic not near genes chr3L 15781720 intergenic not near genes chr3L 15781836 intergenic not near genes chr3L_7_15780001 chr3L_15780001 RAL-913 2624 chr3L 15784522 15784598 chr3L 15784669 15784744 25 144 10.5 10.5 10.5 2.2 222 chr3L 15784522 intergenic not near genes chr3L 15784633 intergenic not near genes chr3L 15784744 intergenic not near genes chr3L_25_15780001 chr3L_15780001 RAL-913 2625 chr3L 15808055 15808072 chr3L 15808190 15808207 6 135 16.5 6.5 11.5 0.5 152 chr3L 15808055 intergenic CG6244 + chr3L 15808131 intergenic CG6244 + chr3L 15808207 intergenic CG6244 + chr3L_6_15805001 chr3L_15805001 RAL-913 2626 chr3L 15827405 15827425 chr3L 15827531 15827551 6 126 36.0 30.0 33.0 0.2 146 chr3L 15827405 intron dbo + chr3L 15827478 intron dbo + chr3L 15827551 intron dbo + chr3L_6_15825001 chr3L_15825001 RAL-913 2627 chr3L 15843013 15843057 chr3L 15843205 15843249 8 192 0.5 9.5 5.0 1.3 236 chr3L 15843013 intron CG32150 - chr3L 15843131 intron CG32150 - chr3L 15843249 intron CG32150 - chr3L_8_15840001 chr3L_15840001 RAL-913 2628 chr3L 15871550 15871599 chr3L 15871684 15871733 20 133 12.0 6.0 9.0 2.0 183 chr3L 15871550 intron pHCl - chr3L 15871642 intron pHCl - chr3L 15871733 intron pHCl - chr3L_20_15870001 chr3L_15870001 RAL-913 2629 chr3L 15883146 15883221 chr3L 15883489 15883564 20 342 20.5 22.5 21.5 0.9 418 chr3L 15883146 intron pHCl - chr3L 15883355 intron pHCl - chr3L 15883564 intron pHCl - chr3L_20_15880001 chr3L_15880001 RAL-913 2630 chr3L 15899197 15899235 chr3L 15899797 15899846 jockey 14 604 13.5 8.5 11.0 1.2 649 chr3L 15899197 intergenic pHCl - chr3L 15899522 intergenic pHCl - chr3L 15899846 intergenic sff - chr3L_14_15895001 chr3L_15895001 RAL-913 2631 chr3L 15918001 15918064 chr3L 15918132 15918195 19 131 29.5 31.5 30.5 0.6 194 chr3L 15918001 intron sff - chr3L 15918098 intron sff - chr3L 15918195 intron sff - chr3L_19_15915001 chr3L_15915001 RAL-913 2632 chr3L 15929160 15929219 chr3L 15938357 15938416 roo 23 9197 11.5 9.5 10.5 2.0 9256 chr3L 15929160 intron Pka-C3 - chr3L 15933788 intron Pka-C3 - chr3L 15938416 intron Pka-C3 - chr3L_23_15930001 chr3L_15930001 RAL-913 2633 chr3L 15946465 15946537 chr3L 15946601 15946673 15 136 21.0 18.0 19.5 0.7 208 chr3L 15946465 intron Pka-C3 - chr3L 15946569 intron Pka-C3 - chr3L 15946673 intron Pka-C3 - chr3L_15_15945001 chr3L_15945001 RAL-913 2634 chr3L 15948655 15948706 chr3L 15948883 15948934 10 226 22.0 25.0 23.5 0.4 279 chr3L 15948655 intron Pka-C3 - chr3L 15948794 intron Pka-C3 - chr3L 15948934 intron Pka-C3 - chr3L_10_15945001 chr3L_15945001 RAL-913 2635 chr3L 16015791 16015860 chr3L 16015919 16015988 21 127 6.0 10.5 8.2 2.3 197 chr3L 16015791 intergenic not near genes chr3L 16015890 intergenic not near genes chr3L 16015988 intergenic not near genes chr3L_21_16015001 chr3L_16015001 RAL-913 2636 chr3L 16020074 16020086 chr3L 16020204 16020216 7 130 22.0 5.5 13.8 0.5 142 chr3L 16020074 intergenic CR43949 - chr3L 16020145 intergenic CR43949 - chr3L 16020216 intergenic CR43949 - chr3L_7_16020001 chr3L_16020001 RAL-913 2637 chr3L 16047729 16047756 chr3L 16047858 16047885 7 128 26.0 32.0 29.0 0.2 156 chr3L 16047729 intron th - chr3L 16047807 intron th - chr3L 16047885 intron th - chr3L_7_16045001 chr3L_16045001 RAL-913 2638 chr3L 16102236 16102273 chr3L 16102371 16102408 10 135 20.5 23.5 22.0 0.4 172 chr3L 16102236 exon CG5414 + chr3L 16102322 intron CG5414 + chr3L 16102408 exon CG5414 + chr3L_10_16100001 chr3L_16100001 RAL-913 2639 chr3L 16145661 16145730 chr3L 16145802 16145873 17 141 20.0 23.0 21.5 0.8 212 chr3L 16145661 intron CG5151 - chr3L 16145767 intron CG5151 - chr3L 16145873 intron CG5151 - chr3L_17_16145001 chr3L_16145001 RAL-913 2640 chr3L 16157616 16157669 chr3L 16157736 16157770 8 119 17.0 15.0 16.0 0.5 154 chr3L 16157616 intron CG5151 - chr3L 16157693 intron CG5151 - chr3L 16157770 intron CG5151 - chr3L_8_16155001 chr3L_16155001 RAL-913 2641 chr3L 16158761 16158831 chr3L 16158896 16158966 12 135 32.5 26.0 29.2 0.4 205 chr3L 16158761 intron CG5151 - chr3L 16158864 intron CG5151 - chr3L 16158966 intron CG5151 - chr3L_12_16155001 chr3L_16155001 RAL-913 2642 chr3L 16162591 16162624 chr3L 16162725 16162758 10 134 19.0 20.5 19.8 0.5 167 chr3L 16162591 intron CG5151 - chr3L 16162674 intron CG5151 - chr3L 16162758 intron CG5151 - chr3L_10_16160001 chr3L_16160001 RAL-913 2643 chr3L 16183094 16183118 chr3L 16183233 16183257 4 139 25.0 26.5 25.8 0.1 163 chr3L 16183094 intergenic not near genes chr3L 16183176 intergenic not near genes chr3L 16183257 intergenic not near genes chr3L_4_16180001 chr3L_16180001 RAL-913 2644 chr3L 16184064 16184126 chr3L 16188933 16188995 X-element 25 4876 8.5 14.0 11.2 2.0 4931 chr3L 16184064 intergenic not near genes chr3L 16186530 intergenic not near genes chr3L 16188995 intergenic not near genes chr3L_25_16185001 chr3L_16185001 RAL-913 2645 chr3L 16192123 16192171 chr3L 16192238 16192299 8 126 21.0 23.5 22.2 0.3 176 chr3L 16192123 intergenic not near genes chr3L 16192211 intergenic not near genes chr3L 16192299 intergenic not near genes chr3L_8_16190001 chr3L_16190001 RAL-913 2646 chr3L 16212771 16212844 chr3L 16212912 16212979 22 141 6.0 1.0 3.5 4.9 208 chr3L 16212771 intergenic CG13073 - chr3L 16212875 intergenic CG13073 - chr3L 16212979 intergenic CG13073 - chr3L_22_16210001 chr3L_16210001 RAL-913 2647 chr3L 16220443 16220523 chr3L 16220590 16220657 6 137 29.0 32.0 30.5 0.2 214 chr3L 16220443 intergenic not near genes chr3L 16220550 intergenic not near genes chr3L 16220657 intergenic not near genes chr3L_6_16220001 chr3L_16220001 RAL-913 2648 chr3L 16236305 16236337 chr3L 16236470 16236502 8 165 16.5 10.5 13.5 0.6 197 chr3L 16236305 3` UTR l(3)72Dp + chr3L 16236404 3` UTR l(3)72Dp + chr3L 16236502 3` UTR l(3)72Dp + chr3L_8_16235001 chr3L_16235001 RAL-913 2649 chr3L 16236339 16236367 chr3L 16236463 16236532 12 160 5.0 9.0 7.0 1.5 193 chr3L 16236339 3` UTR l(3)72Dp + chr3L 16236436 3` UTR l(3)72Dp + chr3L 16236532 3` UTR l(3)72Dp + chr3L_12_16235001 chr3L_16235001 RAL-913 2650 chr3L 16239889 16239949 chr3L 16240015 16240075 14 126 30.0 31.0 30.5 0.4 186 chr3L 16239889 intergenic l(3)72Dr + chr3L 16239982 intergenic not near genes chr3L 16240075 intergenic not near genes chr3L_14_16235001 chr3L_16235001 RAL-913 2651 chr3L 16240706 16240776 chr3L 16240888 16240958 7 182 14.5 21.5 18.0 0.4 252 chr3L 16240706 intergenic not near genes chr3L 16240832 intergenic not near genes chr3L 16240958 intergenic not near genes chr3L_7_16240001 chr3L_16240001 RAL-913 2652 chr3L 16241894 16241918 chr3L 16242028 16242052 6 134 23.5 34.5 29.0 0.2 158 chr3L 16241894 intergenic not near genes chr3L 16241973 intergenic not near genes chr3L 16242052 intergenic not near genes chr3L_6_16240001 chr3L_16240001 RAL-913 2653 chr3L 16243643 16243675 chr3L 16243784 16243816 7 141 0.5 17.0 8.8 0.7 173 chr3L 16243643 intergenic not near genes chr3L 16243730 intergenic not near genes chr3L 16243816 intergenic not near genes chr3L_7_16240001 chr3L_16240001 RAL-913 2654 chr3L 16255420 16255489 chr3L 16255590 16255659 15 170 28.0 26.5 27.2 0.5 239 chr3L 16255420 intergenic CG13054 - chr3L 16255540 intergenic CG13054 - chr3L 16255659 intergenic CG13054 - chr3L_15_16255001 chr3L_16255001 RAL-913 2655 chr3L 16279039 16279090 chr3L 16279170 16279221 11 131 22.0 19.0 20.5 0.5 182 chr3L 16279039 exon CG13050 - chr3L 16279130 intron CG13050 - chr3L 16279221 5` UTR CG13050 - chr3L_11_16275001 chr3L_16275001 RAL-913 2656 chr3L 16301230 16301285 chr3L 16301368 16301423 16 133 13.0 17.0 15.0 1.0 193 chr3L 16301230 intergenic CG4982 + chr3L 16301326 intergenic CG4982 + chr3L 16301423 intergenic CG4982 + chr3L_16_16300001 chr3L_16300001 RAL-913 2657 chr3L 16302183 16302256 chr3L 16302313 16302386 11 130 19.5 16.5 18.0 0.6 203 chr3L 16302183 intergenic CG4982 +,CG13044 - chr3L 16302284 intergenic CG13044 -,CG4982 + chr3L 16302386 intergenic CG13044 -,CG4982 + chr3L_11_16300001 chr3L_16300001 RAL-913 2658 chr3L 16322354 16322396 chr3L 16322565 16322607 9 211 24.5 28.5 26.5 0.3 253 chr3L 16322354 intergenic not near genes chr3L 16322480 intergenic not near genes chr3L 16322607 intergenic not near genes chr3L_9_16320001 chr3L_16320001 RAL-913 2659 chr3L 16322734 16322810 chr3L 16322867 16322879 14 128 31.5 32.0 31.8 0.4 145 chr3L 16322734 intergenic not near genes chr3L 16322806 intergenic not near genes chr3L 16322879 intergenic not near genes chr3L_14_16320001 chr3L_16320001 RAL-913 2660 chr3L 16340213 16340287 chr3L 16340387 16340461 8 174 24.0 23.5 23.8 0.3 248 chr3L 16340213 intron CG4998 + chr3L 16340337 intron CG4998 + chr3L 16340461 exon CG4998 + chr3L_8_16340001 chr3L_16340001 RAL-913 2661 chr3L 16368190 16368255 chr3L 16368321 16368386 22 128 23.5 23.0 23.2 0.9 196 chr3L 16368190 intergenic CG4842 + chr3L 16368288 intergenic CG4842 + chr3L 16368386 intergenic CG4842 + chr3L_22_16365001 chr3L_16365001 RAL-913 2662 chr3L 16389323 16389396 chr3L 16389543 16389601 14 217 21.5 20.0 20.8 0.6 278 chr3L 16389323 exon RAF2 + chr3L 16389462 exon RAF2 + chr3L 16389601 exon RAF2 + chr3L_14_16385001 chr3L_16385001 RAL-913 2663 chr3L 16431783 16431857 chr3L 16431927 16432002 22 144 19.0 13.5 16.2 1.3 219 chr3L 16431783 intron,intron CG33158 +,dsx-c73A - chr3L 16431892 intron,intron CG33158 +,dsx-c73A - chr3L 16432002 intron,intron CG33158 +,dsx-c73A - chr3L_22_16430001 chr3L_16430001 RAL-913 2664 chr3L 16434472 16434535 chr3L 16434609 16434672 9 134 24.0 24.5 24.2 0.4 200 chr3L 16434472 intron,intron CG33158 +,dsx-c73A - chr3L 16434572 intron,intron CG33158 +,dsx-c73A - chr3L 16434672 intron,intron CG33158 +,dsx-c73A - chr3L_9_16430001 chr3L_16430001 RAL-913 2665 chr3L 16440214 16440283 chr3L 16440439 16440508 11 225 15.5 24.5 20.0 0.5 294 chr3L 16440214 intron,intron CG33158 +,dsx-c73A - chr3L 16440361 intron,intron CG33158 +,dsx-c73A - chr3L 16440508 intron,intron CG33158 +,dsx-c73A - chr3L_11_16440001 chr3L_16440001 RAL-913 2666 chr3L 16443798 16443876 chr3L 16446188 16446266 Doc 31 2389 6.0 10.0 8.0 3.4 2468 chr3L 16443798 intron,intron CG33158 +,dsx-c73A - chr3L 16445032 intron,intron CG33158 +,dsx-c73A - chr3L 16446266 intron,intron CG33158 +,dsx-c73A - chr3L_31_16445001 chr3L_16445001 RAL-913 2667 chr3L 16446439 16446473 chr3L 16446593 16446627 14 154 23.0 23.0 23.0 0.6 188 chr3L 16446439 intron,intron CG33158 +,dsx-c73A - chr3L 16446533 intron,intron CG33158 +,dsx-c73A - chr3L 16446627 intron,intron CG33158 +,dsx-c73A - chr3L_14_16445001 chr3L_16445001 RAL-913 2668 chr3L 16457477 16457541 chr3L 16457623 16457686 16 145 11.5 5.5 8.5 1.7 209 chr3L 16457477 intron CG33158 + chr3L 16457582 intron CG33158 + chr3L 16457686 intron CG33158 + chr3L_16_16455001 chr3L_16455001 RAL-913 2669 chr3L 16458221 16458281 chr3L 16458384 16458445 11 163 12.5 10.0 11.2 0.9 224 chr3L 16458221 intron CG33158 + chr3L 16458333 intron CG33158 + chr3L 16458445 intron CG33158 + chr3L_11_16455001 chr3L_16455001 RAL-913 2670 chr3L 16458713 16458772 chr3L 16458842 16458901 13 128 15.0 15.5 15.2 0.8 188 chr3L 16458713 intron CG33158 + chr3L 16458807 intron CG33158 + chr3L 16458901 intron CG33158 + chr3L_13_16455001 chr3L_16455001 RAL-913 2671 chr3L 16465481 16465531 chr3L 16465614 16465664 11 133 23.0 26.5 24.8 0.4 183 chr3L 16465481 intron CG33158 + chr3L 16465572 intron CG33158 + chr3L 16465664 intron CG33158 + chr3L_11_16465001 chr3L_16465001 RAL-913 2672 chr3L 16493937 16494001 chr3L 16494504 16494568 jockey 31 566 9.5 9.5 9.5 3.0 631 chr3L 16493937 intron,exon,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494252 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494568 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_31_16490001 chr3L_16490001 RAL-913 2673 chr3L 16496720 16496754 chr3L 16496891 16496926 9 172 18.0 16.5 17.2 0.5 206 chr3L 16496720 intron CG43373 - chr3L 16496823 intron CG43373 - chr3L 16496926 intron CG43373 - chr3L_9_16495001 chr3L_16495001 RAL-913 2674 chr3L 16503606 16503648 chr3L 16503727 16503775 6 123 15.0 19.5 17.2 0.3 169 chr3L 16503606 intron CG43373 - chr3L 16503690 intron CG43373 - chr3L 16503775 intron CG43373 - chr3L_6_16500001 chr3L_16500001 RAL-913 2675 chr3L 16506193 16506250 chr3L 16506330 16506384 8 137 30.0 28.0 29.0 0.3 191 chr3L 16506193 intron CG43373 - chr3L 16506288 intron CG43373 - chr3L 16506384 3` UTR CG43373 - chr3L_8_16505001 chr3L_16505001 RAL-913 2676 chr3L 16533523 16533586 chr3L 16533684 16533747 12 160 19.5 23.5 21.5 0.5 224 chr3L 16533523 intron CG43373 - chr3L 16533635 intron CG43373 - chr3L 16533747 intron CG43373 - chr3L_12_16530001 chr3L_16530001 RAL-913 2677 chr3L 16539886 16539925 chr3L 16540040 16540086 9 159 28.0 30.5 29.2 0.3 200 chr3L 16539886 intron CG43373 - chr3L 16539986 intron CG43373 - chr3L 16540086 intron CG43373 - chr3L_9_16535001 chr3L_16535001 RAL-913 2678 chr3L 16549236 16549296 chr3L 16549441 16549491 5 203 20.0 18.0 19.0 0.2 255 chr3L 16549236 intergenic not near genes chr3L 16549364 intergenic not near genes chr3L 16549491 intergenic not near genes chr3L_5_16545001 chr3L_16545001 RAL-913 2679 chr3L 16563183 16563255 chr3L 16563314 16563401 8 133 21.5 15.5 18.5 0.4 218 chr3L 16563183 intergenic Mipp1 - chr3L 16563292 intergenic Mipp1 - chr3L 16563401 intergenic Mipp1 - chr3L_8_16560001 chr3L_16560001 RAL-913 2680 chr3L 16616468 16616536 chr3L 16621846 16621914 297 31 5377 13.5 10.5 12.0 2.4 5446 chr3L 16616468 3` UTR Abl - chr3L 16619191 3` UTR Abl - chr3L 16621914 3` UTR Abl - chr3L_31_16615001 chr3L_16615001 RAL-913 2681 chr3L 16638766 16638827 chr3L 16638902 16638963 13 136 27.0 24.5 25.8 0.5 197 chr3L 16638766 intron Abl - chr3L 16638864 intron Abl - chr3L 16638963 intron Abl - chr3L_13_16635001 chr3L_16635001 RAL-913 2682 chr3L 16665476 16665534 chr3L 16665598 16665671 13 133 11.5 10.5 11.0 1.1 195 chr3L 16665476 intron Galphaf - chr3L 16665574 intron Galphaf - chr3L 16665671 intron Galphaf - chr3L_13_16665001 chr3L_16665001 RAL-913 2683 chr3L 16683978 16684038 chr3L 16689249 16689309 copia 30 5271 7.5 11.0 9.2 2.9 5331 chr3L 16683978 intron,intron Lasp -,CG43954 - chr3L 16686644 intron,intron Lasp -,CG43954 - chr3L 16689309 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_30_16685001 chr3L_16685001 RAL-913 2684 chr3L 16714803 16714867 chr3L 16714937 16715001 44 134 6.0 9.0 7.5 5.2 198 chr3L 16714803 intron Dab + chr3L 16714902 intron Dab + chr3L 16715001 intron Dab + chr3L_44_16710001 chr3L_16710001 RAL-913 2685 chr3L 16749159 16749230 chr3L 16749285 16749331 21 124 11.5 8.5 10.0 1.9 172 chr3L 16749159 intergenic not near genes chr3L 16749245 intergenic not near genes chr3L 16749331 intergenic not near genes chr3L_21_16745001 chr3L_16745001 RAL-913 2686 chr3L 16754842 16754886 chr3L 16754981 16755020 7 138 22.5 30.0 26.2 0.3 178 chr3L 16754842 intergenic not near genes chr3L 16754931 intergenic not near genes chr3L 16755020 intergenic CG42852 + chr3L_7_16750001 chr3L_16750001 RAL-913 2687 chr3L 16757611 16757665 chr3L 16757751 16757805 16 140 20.5 16.5 18.5 0.8 194 chr3L 16757611 intergenic not near genes chr3L 16757708 intergenic not near genes chr3L 16757805 intergenic not near genes chr3L_16_16755001 chr3L_16755001 RAL-913 2688 chr3L 16770463 16770481 chr3L 16770559 16770621 5 131 3.0 6.0 4.5 0.9 158 chr3L 16770463 intron Nrt + chr3L 16770542 intron Nrt + chr3L 16770621 intron Nrt + chr3L_5_16770001 chr3L_16770001 RAL-913 2689 chr3L 16772453 16772511 chr3L 16772593 16772651 23 137 26.5 23.5 25.0 0.9 198 chr3L 16772453 intron Nrt + chr3L 16772552 intron Nrt + chr3L 16772651 intron Nrt + chr3L_23_16770001 chr3L_16770001 RAL-913 2690 chr3L 16807996 16808072 chr3L 16808122 16808201 19 127 19.5 21.0 20.2 0.9 205 chr3L 16807996 intron nudC + chr3L 16808098 intron nudC + chr3L 16808201 intron nudC + chr3L_19_16805001 chr3L_16805001 RAL-913 2691 chr3L 16817830 16817897 chr3L 16818020 16818087 13 188 28.0 21.5 24.8 0.5 257 chr3L 16817830 intron,intron nudC +,CG13024 - chr3L 16817958 intron,intron nudC +,CG13024 - chr3L 16818087 intron,intron nudC +,CG13024 - chr3L_13_16815001 chr3L_16815001 RAL-913 2692 chr3L 16818703 16818769 chr3L 16818829 16818895 31 126 7.5 5.0 6.2 4.3 192 chr3L 16818703 intron,intron nudC +,CG13024 - chr3L 16818799 intron,intron nudC +,CG13024 - chr3L 16818895 intron,intron nudC +,CG13024 - chr3L_31_16815001 chr3L_16815001 RAL-913 2693 chr3L 16821257 16821288 chr3L 16821380 16821424 7 129 20.5 17.5 19.0 0.3 167 chr3L 16821257 intron CG13024 - chr3L 16821340 intron CG13024 - chr3L 16821424 intron CG13024 - chr3L_7_16820001 chr3L_16820001 RAL-913 2694 chr3L 16821893 16821934 chr3L 16822028 16822068 8 135 25.5 27.5 26.5 0.3 175 chr3L 16821893 intron CG13024 - chr3L 16821980 intron CG13024 - chr3L 16822068 intron CG13024 - chr3L_8_16820001 chr3L_16820001 RAL-913 2695 chr3L 16830728 16830787 chr3L 16830861 16830920 22 131 20.5 22.5 21.5 1.0 192 chr3L 16830728 intergenic not near genes chr3L 16830824 intergenic not near genes chr3L 16830920 intergenic not near genes chr3L_22_16830001 chr3L_16830001 RAL-913 2696 chr3L 16831544 16831603 chr3L 16831670 16831730 9 126 13.5 20.0 16.8 0.5 186 chr3L 16831544 intergenic not near genes chr3L 16831637 intergenic not near genes chr3L 16831730 intergenic not near genes chr3L_9_16830001 chr3L_16830001 RAL-913 2697 chr3L 16844977 16845040 chr3L 16845140 16845203 27 161 11.0 15.5 13.2 1.9 226 chr3L 16844977 5` UTR CG9669 - chr3L 16845090 intergenic CG9669 -,CG9715 + chr3L 16845203 intergenic CG9715 +,CG9669 - chr3L_27_16845001 chr3L_16845001 RAL-913 2698 chr3L 16860988 16861051 chr3L 16861140 16861203 16 152 18.0 26.5 22.2 0.7 215 chr3L 16860988 intron,exon Rh4 -,CG13029 + chr3L 16861096 intron,intron Rh4 -,CG13029 + chr3L 16861203 intron,exon Rh4 -,CG13029 + chr3L_16_16860001 chr3L_16860001 RAL-913 2699 chr3L 16866168 16866187 chr3L 16866309 16866328 8 141 15.0 5.5 10.2 0.7 160 chr3L 16866168 intron Lmpt + chr3L 16866248 intron Lmpt + chr3L 16866328 intron Lmpt + chr3L_8_16865001 chr3L_16865001 RAL-913 2700 chr3L 16866213 16866329 chr3L 16866353 16866489 9 147 8.0 8.0 8.0 1.0 276 chr3L 16866213 intron Lmpt + chr3L 16866351 intron Lmpt + chr3L 16866489 intron Lmpt + chr3L_9_16865001 chr3L_16865001 RAL-913 2701 chr3L 16869552 16869599 chr3L 16869685 16869732 8 133 27.0 33.0 30.0 0.3 180 chr3L 16869552 intron Lmpt + chr3L 16869642 intron Lmpt + chr3L 16869732 intron Lmpt + chr3L_8_16865001 chr3L_16865001 RAL-913 2702 chr3L 16873292 16873349 chr3L 16873446 16873499 13 154 9.5 9.5 9.5 1.2 207 chr3L 16873292 intron Lmpt + chr3L 16873396 intron Lmpt + chr3L 16873499 intron Lmpt + chr3L_13_16870001 chr3L_16870001 RAL-913 2703 chr3L 16875339 16875364 chr3L 16875535 16875559 10 196 4.0 15.0 9.5 1.0 220 chr3L 16875339 intron Lmpt + chr3L 16875449 intron Lmpt + chr3L 16875559 intron Lmpt + chr3L_10_16875001 chr3L_16875001 RAL-913 2704 chr3L 16882273 16882304 chr3L 16882411 16882442 8 135 19.0 12.5 15.8 0.5 169 chr3L 16882273 intron Lmpt + chr3L 16882358 intron Lmpt + chr3L 16882442 intron Lmpt + chr3L_8_16880001 chr3L_16880001 RAL-913 2705 chr3L 16922607 16922641 chr3L 16922851 16922885 6 244 11.0 17.0 14.0 0.4 278 chr3L 16922607 intergenic Lmpt + chr3L 16922746 intergenic Lmpt + chr3L 16922885 intergenic CG13028 +,Lmpt + chr3L_6_16920001 chr3L_16920001 RAL-913 2706 chr3L 16926200 16926245 chr3L 16927573 16927597 5 1380 10.0 24.5 17.2 0.3 1397 chr3L 16926200 intron CG13023 - chr3L 16926898 intron CG13023 - chr3L 16927597 intergenic CG13023 - chr3L_5_16925001 chr3L_16925001 RAL-913 2707 chr3L 16945681 16945760 chr3L 16954882 16954957 roo 19 9195 3.5 10.5 7.0 2.4 9276 chr3L 16945681 exon Obp73a + chr3L 16950319 intergenic not near genes chr3L 16954957 5` UTR Nc73EF + chr3L_19_16950001 chr3L_16950001 RAL-913 2708 chr3L 16971038 16971080 chr3L 16971175 16971217 9 137 29.5 35.5 32.5 0.3 179 chr3L 16971038 intron Exn + chr3L 16971128 intron Exn + chr3L 16971217 intron Exn + chr3L_9_16970001 chr3L_16970001 RAL-913 2709 chr3L 16973347 16973366 chr3L 23583082 23583101 6 6609735 31.0 32.5 31.8 0.2 6609754 chr3L 16973347 intron Exn + chr3L 20278224 exon gogo - chr3L 23583101 intron AGO3 + chr3L_6_20275001 chr3L_20275001 RAL-913 2710 chr3L 17024014 17024079 chr3L 17024145 17024210 14 131 26.0 24.0 25.0 0.5 196 chr3L 17024014 intergenic a10 -,Fit2 + chr3L 17024112 intergenic Fit2 +,a10 - chr3L 17024210 intergenic Fit2 +,a10 - chr3L_14_17020001 chr3L_17020001 RAL-913 2711 chr3L 17026742 17026818 chr3L 17026873 17026948 18 123 21.5 15.0 18.2 0.9 206 chr3L 17026742 exon Fit2 + chr3L 17026845 3` UTR Fit2 + chr3L 17026948 3` UTR Fit2 + chr3L_18_17025001 chr3L_17025001 RAL-913 2712 chr3L 17027127 17027187 chr3L 17027269 17027329 13 142 23.0 23.5 23.2 0.5 202 chr3L 17027127 intergenic Fit2 +,CG7730 + chr3L 17027228 intergenic Fit2 +,CG7730 + chr3L 17027329 intergenic CG7730 +,Fit2 + chr3L_13_17025001 chr3L_17025001 RAL-913 2713 chr3L 17034889 17034961 chr3L 17035122 17035199 G2 22 238 7.5 13.5 10.5 1.9 310 chr3L 17034889 intergenic not near genes chr3L 17035044 intergenic not near genes chr3L 17035199 intergenic beg + chr3L_22_17035001 chr3L_17035001 RAL-913 2714 chr3L 17058618 17058643 chr3L 17058751 17058776 5 133 19.0 13.0 16.0 0.3 158 chr3L 17058618 intergenic CG7724 +,Rbp6 - chr3L 17058697 intergenic Rbp6 -,CG7724 + chr3L 17058776 3` UTR Rbp6 - chr3L_5_17055001 chr3L_17055001 RAL-913 2715 chr3L 17084961 17085029 chr3L 17094160 17094228 roo 32 9199 10.5 12.5 11.5 2.6 9267 chr3L 17084961 intron Rbp6 - chr3L 17089594 intron Rbp6 - chr3L 17094228 intron Rbp6 - chr3L_32_17085001 chr3L_17085001 RAL-913 2716 chr3L 17113506 17113523 chr3L 17114106 17114123 6 597 17.5 11.5 14.5 0.4 617 chr3L 17113506 intron Rbp6 - chr3L 17113814 intron Rbp6 - chr3L 17114123 intron Rbp6 - chr3L_6_17110001 chr3L_17110001 RAL-913 2717 chr3L 17113531 17113581 chr3L 17114103 17114166 14 590 14.5 12.0 13.2 1.0 635 chr3L 17113531 intron Rbp6 - chr3L 17113848 intron Rbp6 - chr3L 17114166 intron Rbp6 - chr3L_14_17110001 chr3L_17110001 RAL-913 2718 chr3L 17120604 17120670 chr3L 17120730 17120795 17 124 24.5 21.5 23.0 0.7 191 chr3L 17120604 intron Rbp6 - chr3L 17120700 intron Rbp6 - chr3L 17120795 intron Rbp6 - chr3L_17_17120001 chr3L_17120001 RAL-913 2719 chr3L 17132784 17132861 chr3L 17132923 17132992 7 132 18.5 11.5 15.0 0.4 208 chr3L 17132784 intron Rbp6 - chr3L 17132888 intron Rbp6 - chr3L 17132992 intron Rbp6 - chr3L_7_17130001 chr3L_17130001 RAL-913 2720 chr3L 17146910 17146963 chr3L 17147042 17147095 6 132 23.5 18.5 21.0 0.3 185 chr3L 17146910 intron Rbp6 - chr3L 17147002 intron Rbp6 - chr3L 17147095 intron Rbp6 - chr3L_6_17145001 chr3L_17145001 RAL-913 2721 chr3L 17149116 17149134 chr3L 17149247 17149265 13 130 13.5 0.5 7.0 1.6 149 chr3L 17149116 intron Rbp6 - chr3L 17149190 intron Rbp6 - chr3L 17149265 intron Rbp6 - chr3L_13_17145001 chr3L_17145001 RAL-913 2722 chr3L 17222425 17222465 chr3L 17222648 17222692 6 226 30.0 24.0 27.0 0.2 267 chr3L 17222425 intron Rbp6 - chr3L 17222558 intron Rbp6 - chr3L 17222692 intron Rbp6 - chr3L_6_17220001 chr3L_17220001 RAL-913 2723 chr3L 17226693 17226726 chr3L 17226822 17226855 7 128 21.5 24.0 22.8 0.3 162 chr3L 17226693 intron Rbp6 - chr3L 17226774 intron Rbp6 - chr3L 17226855 intron Rbp6 - chr3L_7_17225001 chr3L_17225001 RAL-913 2724 chr3L 17237336 17237404 chr3L 17237538 17237606 11 202 31.5 28.0 29.8 0.4 270 chr3L 17237336 intron Rbp6 - chr3L 17237471 intron Rbp6 - chr3L 17237606 intron Rbp6 - chr3L_11_17235001 chr3L_17235001 RAL-913 2725 chr3L 17272196 17272247 chr3L 17272379 17272430 10 183 23.5 26.0 24.8 0.4 234 chr3L 17272196 intergenic not near genes chr3L 17272313 intergenic not near genes chr3L 17272430 intergenic not near genes chr3L_10_17270001 chr3L_17270001 RAL-913 2726 chr3L 17300557 17300611 chr3L 17300804 17300849 7 260 22.5 18.0 20.2 0.3 292 chr3L 17300557 intergenic not near genes chr3L 17300703 intergenic not near genes chr3L 17300849 intergenic not near genes chr3L_7_17300001 chr3L_17300001 RAL-913 2727 chr3L 17329215 17329274 chr3L 17329345 17329404 13 130 23.5 25.5 24.5 0.5 189 chr3L 17329215 intergenic Or74a - chr3L 17329310 intergenic Or74a - chr3L 17329404 intergenic Or74a - chr3L_13_17325001 chr3L_17325001 RAL-913 2728 chr3L 17331024 17331096 chr3L 17331164 17331236 30 139 7.5 10.0 8.8 3.1 212 chr3L 17331024 intergenic not near genes chr3L 17331130 intergenic not near genes chr3L 17331236 intergenic not near genes chr3L_30_17330001 chr3L_17330001 RAL-913 2729 chr3L 17358018 17358045 chr3L 17358149 17358176 7 131 12.5 13.5 13.0 0.5 158 chr3L 17358018 3` UTR CG7692 + chr3L 17358097 intergenic CG7692 + chr3L 17358176 intergenic CG7692 + chr3L_7_17355001 chr3L_17355001 RAL-913 2730 chr3L 17367385 17367460 chr3L 17367529 17367604 15 144 23.5 26.5 25.0 0.6 219 chr3L 17367385 intergenic CR45688 +,Cad74A - chr3L 17367494 intergenic CR45688 +,Cad74A - chr3L 17367604 intergenic Cad74A -,CR45688 + chr3L_15_17365001 chr3L_17365001 RAL-913 2731 chr3L 17403344 17403356 chr3L 17403498 17403516 4 158 26.5 22.0 24.2 0.2 172 chr3L 17403344 intron blot - chr3L 17403430 intron blot - chr3L 17403516 intron blot - chr3L_4_17400001 chr3L_17400001 RAL-913 2732 chr3L 17408868 17409135 chr3L 17408994 17409271 31 128 34.5 30.5 32.5 0.9 403 chr3L 17408868 intron blot - chr3L 17409070 intron blot - chr3L 17409271 exon blot - chr3L_31_17405001 chr3L_17405001 RAL-913 2733 chr3L 17461969 17461996 chr3L 17462164 17462191 8 195 22.5 17.0 19.8 0.4 222 chr3L 17461969 intergenic not near genes chr3L 17462080 intergenic not near genes chr3L 17462191 intergenic not near genes chr3L_8_17460001 chr3L_17460001 RAL-913 2734 chr3L 17472178 17472206 chr3L 17472304 17472332 8 126 29.5 20.0 24.8 0.3 154 chr3L 17472178 intron CG7589 + chr3L 17472255 intron CG7589 + chr3L 17472332 intron CG7589 + chr3L_8_17470001 chr3L_17470001 RAL-913 2735 chr3L 17510693 17510757 chr3L 17510817 17510886 25 132 6.0 9.0 7.5 2.9 193 chr3L 17510693 exon Oatp74D + chr3L 17510790 intron Oatp74D + chr3L 17510886 intron Oatp74D + chr3L_25_17510001 chr3L_17510001 RAL-913 2736 chr3L 17516945 17516991 chr3L 17524548 17524599 412 17 7607 11.0 10.0 10.5 1.5 7654 chr3L 17516945 intron CG7564 + chr3L 17520772 intron CG7564 + chr3L 17524599 3` UTR CG7564 + chr3L_17_17520001 chr3L_17520001 RAL-913 2737 chr3L 17594194 17594269 chr3L 17594325 17594400 27 130 28.0 29.5 28.8 0.9 206 chr3L 17594194 intron Eip74EF - chr3L 17594297 intron Eip74EF - chr3L 17594400 intron Eip74EF - chr3L_27_17590001 chr3L_17590001 RAL-913 2738 chr3L 17595129 17595192 chr3L 17595275 17595357 9 164 21.5 25.0 23.2 0.4 228 chr3L 17595129 intron Eip74EF - chr3L 17595243 intron Eip74EF - chr3L 17595357 intron Eip74EF - chr3L_9_17595001 chr3L_17595001 RAL-913 2739 chr3L 17600780 17600823 chr3L 17600924 17600967 12 144 25.5 19.0 22.2 0.5 187 chr3L 17600780 intron Eip74EF - chr3L 17600874 intron Eip74EF - chr3L 17600967 intron Eip74EF - chr3L_12_17600001 chr3L_17600001 RAL-913 2740 chr3L 17632690 17632735 chr3L 17632853 17632898 12 163 33.0 35.0 34.0 0.3 208 chr3L 17632690 intergenic CR44567 -,CR44566 + chr3L 17632794 intergenic CR44567 - chr3L 17632898 intergenic CR44567 - chr3L_12_17630001 chr3L_17630001 RAL-913 2741 chr3L 17645264 17645332 chr3L 17645391 17645459 20 127 17.5 19.5 18.5 1.0 195 chr3L 17645264 intergenic CG43085 -,Pep - chr3L 17645362 intergenic CG43085 -,Pep - chr3L 17645459 intergenic CG43085 -,Pep - chr3L_20_17645001 chr3L_17645001 RAL-913 2742 chr3L 17672520 17672589 chr3L 17672645 17672673 7 112 20.0 19.0 19.5 0.3 153 chr3L 17672520 intron CG34251 + chr3L 17672596 intron CG34251 + chr3L 17672673 intron CG34251 + chr3L_7_17670001 chr3L_17670001 RAL-913 2743 chr3L 17678850 17678894 chr3L 17678984 17679028 19 134 13.0 0.0 6.5 2.5 178 chr3L 17678850 intron CG34251 + chr3L 17678939 intron CG34251 + chr3L 17679028 intron CG34251 + chr3L_19_17675001 chr3L_17675001 RAL-913 2744 chr3L 17691938 17691985 chr3L 17692072 17692119 11 134 29.0 28.0 28.5 0.4 181 chr3L 17691938 intron Ccn + chr3L 17692028 intron Ccn + chr3L 17692119 intron Ccn + chr3L_11_17690001 chr3L_17690001 RAL-913 2745 chr3L 17698228 17698234 chr3L 17698860 17698866 Juan 4 632 25.0 7.5 16.2 0.2 638 chr3L 17698228 intron Ccn + chr3L 17698547 intron Ccn + chr3L 17698866 intron Ccn + chr3L_4_17695001 chr3L_17695001 RAL-913 2746 chr3L 17721578 17721611 chr3L 17721716 17721749 8 138 27.0 31.0 29.0 0.3 171 chr3L 17721578 intron Ccn + chr3L 17721664 intron Ccn + chr3L 17721749 intron Ccn + chr3L_8_17720001 chr3L_17720001 RAL-913 2747 chr3L 17730704 17730770 chr3L 17738242 17738308 mdg1 11 7538 30.5 16.5 23.5 0.4 7604 chr3L 17730704 intron Ccn + chr3L 17734506 intron Ccn + chr3L 17738308 intron Ccn + chr3L_11_17730001 chr3L_17730001 RAL-913 2748 chr3L 17730812 17730872 chr3L 17738192 17738252 mdg1 24 7380 8.0 7.0 7.5 2.8 7440 chr3L 17730812 intron Ccn + chr3L 17734532 intron Ccn + chr3L 17738252 intron Ccn + chr3L_24_17730001 chr3L_17730001 RAL-913 2749 chr3L 17753316 17753354 chr3L 17753452 17753490 15 135 34.5 33.0 33.8 0.4 174 chr3L 17753316 exon Adgf-A - chr3L 17753403 intron Adgf-A - chr3L 17753490 exon Adgf-A - chr3L_15_17750001 chr3L_17750001 RAL-913 2750 chr3L 17789798 17789869 chr3L 17789924 17789995 20 126 10.5 7.5 9.0 2.0 197 chr3L 17789798 intergenic not near genes chr3L 17789896 intergenic not near genes chr3L 17789995 intergenic not near genes chr3L_20_17785001 chr3L_17785001 RAL-913 2751 chr3L 17790409 17790577 chr3L 17790600 17790892 8 192 10.5 10.5 10.5 0.7 483 chr3L 17790409 intergenic not near genes chr3L 17790650 intergenic CG42815 - chr3L 17790892 intergenic CG42815 - chr3L_8_17790001 chr3L_17790001 RAL-913 2752 chr3L 17790595 17790636 chr3L 17790899 17790951 17 313 4.5 9.5 7.0 2.1 356 chr3L 17790595 intergenic CG42815 - chr3L 17790773 intergenic CG42815 - chr3L 17790951 intergenic CG42815 - chr3L_17_17790001 chr3L_17790001 RAL-913 2753 chr3L 17791893 17791921 chr3L 17792020 17792048 12 127 20.5 17.5 19.0 0.6 155 chr3L 17791893 intergenic CG42816 -,CG42815 - chr3L 17791970 intergenic CG42816 -,CG42815 - chr3L 17792048 intergenic CG42816 - chr3L_12_17790001 chr3L_17790001 RAL-913 2754 chr3L 17799765 17799838 chr3L 17801602 17801675 S-element 36 1837 10.5 7.0 8.8 3.7 1910 chr3L 17799765 intron NUCB1 - chr3L 17800720 intron NUCB1 - chr3L 17801675 intron NUCB1 - chr3L_36_17800001 chr3L_17800001 RAL-913 2755 chr3L 17834301 17834347 chr3L 17834515 17834561 9 214 4.0 9.5 6.8 1.2 260 chr3L 17834301 intron Grd + chr3L 17834431 intron Grd + chr3L 17834561 intron Grd + chr3L_9_17830001 chr3L_17830001 RAL-913 2756 chr3L 17870400 17870452 chr3L 17870697 17870770 17 299 72.0 63.5 67.8 0.2 370 chr3L 17870400 intergenic not near genes chr3L 17870585 intergenic not near genes chr3L 17870770 intergenic not near genes chr3L_17_17870001 chr3L_17870001 RAL-913 2757 chr3L 17918334 17918393 chr3L 17921187 17921229 opus 17 2850 11.5 10.5 11.0 1.4 2895 chr3L 17918334 intergenic not near genes chr3L 17919782 intergenic not near genes chr3L 17921229 intergenic not near genes chr3L_17_17915001 chr3L_17915001 RAL-913 2758 chr3L 17923550 17923596 chr3L 17923677 17923723 9 127 20.5 16.0 18.2 0.5 173 chr3L 17923550 intergenic not near genes chr3L 17923636 intergenic not near genes chr3L 17923723 intergenic not near genes chr3L_9_17920001 chr3L_17920001 RAL-913 2759 chr3L 17948151 17948193 chr3L 17948273 17948289 5 115 17.0 11.5 14.2 0.3 138 chr3L 17948151 intergenic CR45393 - chr3L 17948220 intergenic not near genes chr3L 17948289 intergenic not near genes chr3L_5_17945001 chr3L_17945001 RAL-913 2760 chr3L 17948765 17948816 chr3L 17948909 17948961 10 144 24.0 26.5 25.2 0.4 196 chr3L 17948765 intergenic not near genes chr3L 17948863 intergenic not near genes chr3L 17948961 intergenic not near genes chr3L_10_17945001 chr3L_17945001 RAL-913 2761 chr3L 17991539 17991584 chr3L 17991667 17991712 10 128 30.5 30.5 30.5 0.3 173 chr3L 17991539 intron Eip75B - chr3L 17991626 intron Eip75B - chr3L 17991712 intron Eip75B - chr3L_10_17990001 chr3L_17990001 RAL-913 2762 chr3L 18000626 18000696 chr3L 18000753 18000823 11 127 28.5 27.5 28.0 0.4 197 chr3L 18000626 intron Eip75B - chr3L 18000724 intron Eip75B - chr3L 18000823 intron Eip75B - chr3L_11_18000001 chr3L_18000001 RAL-913 2763 chr3L 18013920 18013944 chr3L 18014059 18014083 10 139 18.0 0.0 9.0 1.0 163 chr3L 18013920 intron Eip75B - chr3L 18014002 intron Eip75B - chr3L 18014083 intron Eip75B - chr3L_10_18010001 chr3L_18010001 RAL-913 2764 chr3L 18016010 18016083 chr3L 18016147 18016220 11 138 36.5 33.0 34.8 0.3 210 chr3L 18016010 intron Eip75B - chr3L 18016115 intron Eip75B - chr3L 18016220 intron Eip75B - chr3L_11_18015001 chr3L_18015001 RAL-913 2765 chr3L 18020518 18020582 chr3L 18020674 18020738 14 156 18.0 17.0 17.5 0.8 220 chr3L 18020518 intron Eip75B - chr3L 18020628 intron Eip75B - chr3L 18020738 intron Eip75B - chr3L_14_18020001 chr3L_18020001 RAL-913 2766 chr3L 18027042 18027066 chr3L 18027171 18027195 8 130 8.0 8.5 8.2 0.9 153 chr3L 18027042 intron Eip75B - chr3L 18027118 intron Eip75B - chr3L 18027195 intron Eip75B - chr3L_8_18025001 chr3L_18025001 RAL-913 2767 chr3L 18029909 18029939 chr3L 18030036 18030066 15 127 17.0 0.0 8.5 1.6 157 chr3L 18029909 intron Eip75B - chr3L 18029988 intron Eip75B - chr3L 18030066 intron Eip75B - chr3L_15_18025001 chr3L_18025001 RAL-913 2768 chr3L 18042460 18042517 chr3L 18042588 18042645 7 128 17.0 25.0 21.0 0.3 185 chr3L 18042460 intron Eip75B - chr3L 18042552 intron Eip75B - chr3L 18042645 intron Eip75B - chr3L_7_18040001 chr3L_18040001 RAL-913 2769 chr3L 18047662 18047732 chr3L 18056769 18056839 roo 28 9107 7.5 6.5 7.0 3.5 9177 chr3L 18047662 intron Eip75B - chr3L 18052250 intron Eip75B - chr3L 18056839 intron Eip75B - chr3L_28_18050001 chr3L_18050001 RAL-913 2770 chr3L 18057927 18058006 chr3L 18058078 18058157 23 150 7.5 4.0 5.8 3.4 230 chr3L 18057927 intron Eip75B - chr3L 18058042 intron Eip75B - chr3L 18058157 intron Eip75B - chr3L_23_18055001 chr3L_18055001 RAL-913 2771 chr3L 18064014 18064197 chr3L 18064150 18064367 28 145 18.5 12.0 15.2 1.7 353 chr3L 18064014 intron Eip75B - chr3L 18064190 intron Eip75B - chr3L 18064367 intron Eip75B - chr3L_28_18060001 chr3L_18060001 RAL-913 2772 chr3L 18066279 18066295 chr3L 18066459 18066495 4 193 19.0 17.5 18.2 0.2 216 chr3L 18066279 intergenic not near genes chr3L 18066387 intergenic not near genes chr3L 18066495 intergenic not near genes chr3L_4_18065001 chr3L_18065001 RAL-913 2773 chr3L 18066297 18066330 chr3L 18066456 18066462 12 182 18.0 16.5 17.2 0.7 165 chr3L 18066297 intergenic not near genes chr3L 18066380 intergenic not near genes chr3L 18066462 intergenic not near genes chr3L_12_18065001 chr3L_18065001 RAL-913 2774 chr3L 18073939 18074001 chr3L 18074090 18074152 17 151 23.5 21.0 22.2 0.7 213 chr3L 18073939 intergenic CG44004 - chr3L 18074046 intergenic CG44004 - chr3L 18074152 intergenic CG44004 - chr3L_17_18070001 chr3L_18070001 RAL-913 2775 chr3L 18080973 18081015 chr3L 18081105 18081147 23 132 14.0 4.0 9.0 2.3 174 chr3L 18080973 intergenic CR43253 - chr3L 18081060 intergenic CR43253 - chr3L 18081147 3` UTR CR43253 - chr3L_23_18080001 chr3L_18080001 RAL-913 2776 chr3L 18089575 18089649 chr3L 18089718 18089777 5 134 12.0 3.5 7.8 0.6 202 chr3L 18089575 exon CG13698 - chr3L 18089676 intron CG13698 - chr3L 18089777 intron CG13698 - chr3L_5_18085001 chr3L_18085001 RAL-913 2777 chr3L 18092406 18092422 chr3L 18092581 18092597 4 174 31.5 35.0 33.2 0.1 191 chr3L 18092406 intron CG13698 - chr3L 18092502 intron CG13698 - chr3L 18092597 intron CG13698 - chr3L_4_18090001 chr3L_18090001 RAL-913 2778 chr3L 18106207 18106285 chr3L 18106376 18106414 12 160 17.0 13.5 15.2 0.7 207 chr3L 18106207 intergenic CG13698 -,mRpS26 + chr3L 18106310 intergenic CG13698 -,mRpS26 + chr3L 18106414 intergenic mRpS26 +,CG13698 - chr3L_12_18105001 chr3L_18105001 RAL-913 2779 chr3L 18107572 18107637 chr3L 18107715 18107780 17 143 22.5 19.0 20.8 0.8 208 chr3L 18107572 intergenic mRpS26 +,CG5147 - chr3L 18107676 intergenic CG5147 -,mRpS26 + chr3L 18107780 intergenic CG5147 -,mRpS26 + chr3L_17_18105001 chr3L_18105001 RAL-913 2780 chr3L 18113265 18113282 chr3L 18113412 18113429 16 146 4.0 14.5 9.2 1.6 164 chr3L 18113265 intron,intron CG32195 +,CG7341 + chr3L 18113347 intron,intron CG32195 +,CG7341 + chr3L 18113429 intron,intron CG32195 +,CG7341 + chr3L_16_18110001 chr3L_18110001 RAL-913 2781 chr3L 18118167 18118235 chr3L 18118295 18118363 14 128 26.5 25.0 25.8 0.5 196 chr3L 18118167 3` UTR,intron CG32195 +,CG7341 + chr3L 18118265 3` UTR,intron CG32195 +,CG7341 + chr3L 18118363 3` UTR,intron CG32195 +,CG7341 + chr3L_14_18115001 chr3L_18115001 RAL-913 2782 chr3L 18122586 18122611 chr3L 18122713 18122738 9 127 17.5 11.0 14.2 0.6 152 chr3L 18122586 intergenic not near genes chr3L 18122662 intergenic not near genes chr3L 18122738 intergenic not near genes chr3L_9_18120001 chr3L_18120001 RAL-913 2783 chr3L 18122612 18122652 chr3L 18122710 18122779 19 125 9.0 11.0 10.0 1.7 167 chr3L 18122612 intergenic not near genes chr3L 18122696 intergenic not near genes chr3L 18122779 intergenic not near genes chr3L_19_18120001 chr3L_18120001 RAL-913 2784 chr3L 18133565 18133603 chr3L 18133696 18133734 16 131 19.5 23.0 21.2 0.7 169 chr3L 18133565 intergenic not near genes chr3L 18133650 intergenic not near genes chr3L 18133734 intergenic not near genes chr3L_16_18130001 chr3L_18130001 RAL-913 2785 chr3L 18136636 18136683 chr3L 18136764 18136811 13 128 3.5 15.5 9.5 1.2 175 chr3L 18136636 intergenic CR44669 - chr3L 18136724 intergenic CR44669 - chr3L 18136811 intergenic not near genes chr3L_13_18135001 chr3L_18135001 RAL-913 2786 chr3L 18150323 18150375 chr3L 18150455 18150508 10 133 3.0 11.5 7.2 1.2 185 chr3L 18150323 intron CG7330 + chr3L 18150416 intron CG7330 + chr3L 18150508 intron CG7330 + chr3L_10_18150001 chr3L_18150001 RAL-913 2787 chr3L 18152700 18152754 chr3L 18152861 18152914 6 160 20.0 28.5 24.2 0.2 214 chr3L 18152700 intron CG7330 + chr3L 18152807 intron CG7330 + chr3L 18152914 intron CG7330 + chr3L_6_18150001 chr3L_18150001 RAL-913 2788 chr3L 18160626 18160662 chr3L 18160758 18160794 22 131 16.0 7.0 11.5 1.8 168 chr3L 18160626 intron CG13699 - chr3L 18160710 intron CG13699 - chr3L 18160794 intron CG13699 - chr3L_22_18160001 chr3L_18160001 RAL-913 2789 chr3L 18163931 18164224 chr3L 18164183 18164441 18 230 24.0 25.5 24.8 0.7 510 chr3L 18163931 intergenic not near genes chr3L 18164186 intergenic not near genes chr3L 18164441 intergenic not near genes chr3L_18_18160001 chr3L_18160001 RAL-913 2790 chr3L 18164233 18164238 chr3L 18164450 18164455 6 217 23.5 34.0 28.8 0.2 222 chr3L 18164233 intergenic not near genes chr3L 18164344 intergenic not near genes chr3L 18164455 intergenic not near genes chr3L_6_18160001 chr3L_18160001 RAL-913 2791 chr3L 18172641 18172696 chr3L 18172767 18172822 25 126 13.5 6.0 9.8 2.3 181 chr3L 18172641 intron W - chr3L 18172732 intron W - chr3L 18172822 intron W - chr3L_25_18170001 chr3L_18170001 RAL-913 2792 chr3L 18175770 18175836 chr3L 18176059 18176125 16 289 27.0 15.0 21.0 0.7 355 chr3L 18175770 intron W - chr3L 18175948 intron W - chr3L 18176125 intron W - chr3L_16_18175001 chr3L_18175001 RAL-913 2793 chr3L 18180904 18180962 chr3L 18181037 18181095 4 133 25.5 25.0 25.2 0.2 191 chr3L 18180904 intron W - chr3L 18181000 intron W - chr3L 18181095 intron W - chr3L_4_18180001 chr3L_18180001 RAL-913 2794 chr3L 18186583 18186618 chr3L 18186772 18186807 10 189 18.0 24.5 21.2 0.5 224 chr3L 18186583 intergenic not near genes chr3L 18186695 intergenic not near genes chr3L 18186807 intergenic not near genes chr3L_10_18185001 chr3L_18185001 RAL-913 2795 chr3L 18189546 18189583 chr3L 18190197 18190234 S-element 11 650 23.0 11.5 17.2 0.6 688 chr3L 18189546 intergenic not near genes chr3L 18189890 intergenic not near genes chr3L 18190234 intergenic not near genes chr3L_11_18185001 chr3L_18185001 RAL-913 2796 chr3L 18198929 18198933 chr3L 24821492 24821493 27 6622563 1.0 31.0 16.0 1.6 6622564 chr3L 18198929 intergenic not near genes chr3L 21510211 intron M6 + chr3L 24821493 intergenic not near genes chr3L_27_21510001 chr3L_21510001 RAL-913 2797 chr3L 18203555 18203627 chr3L 18203700 18203761 7 135 15.5 6.5 11.0 0.6 206 chr3L 18203555 exon CG7320 + chr3L 18203658 intergenic CG7320 + chr3L 18203761 intergenic CG7320 + chr3L_7_18200001 chr3L_18200001 RAL-913 2798 chr3L 18210693 18210749 chr3L 18210819 18210875 24 126 18.5 20.5 19.5 1.2 182 chr3L 18210693 intergenic not near genes chr3L 18210784 intergenic not near genes chr3L 18210875 intergenic not near genes chr3L_24_18210001 chr3L_18210001 RAL-913 2799 chr3L 18221049 18221132 chr3L 18221189 18221267 9 130 17.5 22.5 20.0 0.4 218 chr3L 18221049 intergenic not near genes chr3L 18221158 intergenic not near genes chr3L 18221267 intergenic not near genes chr3L_9_18220001 chr3L_18220001 RAL-913 2800 chr3L 18223118 18223186 chr3L 18223251 18223331 23 137 9.5 3.0 6.2 3.2 213 chr3L 18223118 intergenic not near genes chr3L 18223224 intergenic not near genes chr3L 18223331 intergenic not near genes chr3L_23_18220001 chr3L_18220001 RAL-913 2801 chr3L 18240095 18240118 chr3L 18240248 18240271 7 153 16.5 0.0 8.2 0.8 176 chr3L 18240095 intergenic not near genes chr3L 18240183 intergenic not near genes chr3L 18240271 intergenic not near genes chr3L_7_18240001 chr3L_18240001 RAL-913 2802 chr3L 18248905 18248984 chr3L 18249053 18249132 16 148 12.5 11.0 11.8 1.2 227 chr3L 18248905 intergenic not near genes chr3L 18249018 intergenic not near genes chr3L 18249132 intergenic not near genes chr3L_16_18245001 chr3L_18245001 RAL-913 2803 chr3L 18253634 18253711 chr3L 18253893 18253971 13 259 23.0 20.5 21.8 0.6 337 chr3L 18253634 intergenic not near genes chr3L 18253802 intergenic not near genes chr3L 18253971 intergenic not near genes chr3L_13_18250001 chr3L_18250001 RAL-913 2804 chr3L 18258811 18258886 chr3L 18258987 18259062 14 176 20.5 22.0 21.2 0.6 251 chr3L 18258811 intergenic not near genes chr3L 18258936 intergenic not near genes chr3L 18259062 intergenic not near genes chr3L_14_18255001 chr3L_18255001 RAL-913 2805 chr3L 18262423 18262484 chr3L 18262556 18262617 30 133 12.0 4.0 8.0 3.3 194 chr3L 18262423 intergenic not near genes chr3L 18262520 intergenic not near genes chr3L 18262617 intergenic not near genes chr3L_30_18260001 chr3L_18260001 RAL-913 2806 chr3L 18267793 18267867 chr3L 18267920 18267994 8 126 9.5 6.5 8.0 0.9 201 chr3L 18267793 intergenic not near genes chr3L 18267894 intergenic not near genes chr3L 18267994 intergenic not near genes chr3L_8_18265001 chr3L_18265001 RAL-913 2807 chr3L 18275546 18275604 chr3L 18275707 18275765 14 161 19.5 20.0 19.8 0.7 219 chr3L 18275546 intergenic not near genes chr3L 18275656 intergenic not near genes chr3L 18275765 intergenic not near genes chr3L_14_18275001 chr3L_18275001 RAL-913 2808 chr3L 18276028 18276106 chr3L 18276173 18276251 20 143 4.5 5.5 5.0 3.3 223 chr3L 18276028 intergenic not near genes chr3L 18276140 intergenic not near genes chr3L 18276251 intergenic not near genes chr3L_20_18275001 chr3L_18275001 RAL-913 2809 chr3L 18301304 18301374 chr3L 18301442 18301513 18 139 12.0 15.5 13.8 1.2 209 chr3L 18301304 intergenic CG13700 - chr3L 18301408 intergenic CG13700 - chr3L 18301513 intergenic CG13700 - chr3L_18_18300001 chr3L_18300001 RAL-913 2810 chr3L 18307257 18307333 chr3L 18307394 18307468 15 136 0.0 0.0 0.0 15.0 211 chr3L 18307257 intergenic not near genes chr3L 18307362 intergenic not near genes chr3L 18307468 intergenic not near genes chr3L_15_18305001 chr3L_18305001 RAL-913 2811 chr3L 18337641 18337706 chr3L 18337768 18337833 11 127 19.0 12.0 15.5 0.7 192 chr3L 18337641 intergenic not near genes chr3L 18337737 intergenic not near genes chr3L 18337833 intergenic not near genes chr3L_11_18335001 chr3L_18335001 RAL-913 2812 chr3L 18359555 18359626 chr3L 18359697 18359768 18 142 22.5 24.5 23.5 0.7 213 chr3L 18359555 intergenic not near genes chr3L 18359662 intergenic not near genes chr3L 18359768 intergenic not near genes chr3L_18_18355001 chr3L_18355001 RAL-913 2813 chr3L 18375289 18375293 chr3L 18375490 18375494 4 201 8.5 3.0 5.8 0.6 205 chr3L 18375289 intergenic not near genes chr3L 18375392 intergenic not near genes chr3L 18375494 intergenic not near genes chr3L_4_18375001 chr3L_18375001 RAL-913 2814 chr3L 18401604 18401649 chr3L 18401733 18401778 7 129 23.5 24.0 23.8 0.3 174 chr3L 18401604 intergenic not near genes chr3L 18401691 intergenic not near genes chr3L 18401778 intergenic not near genes chr3L_7_18400001 chr3L_18400001 RAL-913 2815 chr3L 18406098 18406152 chr3L 18406224 18406278 11 126 6.5 12.5 9.5 1.0 180 chr3L 18406098 intergenic not near genes chr3L 18406188 intergenic not near genes chr3L 18406278 intergenic not near genes chr3L_11_18405001 chr3L_18405001 RAL-913 2816 chr3L 18408693 18408752 chr3L 18408829 18408888 9 136 21.5 24.5 23.0 0.4 195 chr3L 18408693 intergenic not near genes chr3L 18408790 intergenic not near genes chr3L 18408888 intergenic not near genes chr3L_9_18405001 chr3L_18405001 RAL-913 2817 chr3L 18423701 18423712 chr3L 18423832 18423843 8 131 4.5 7.5 6.0 1.1 142 chr3L 18423701 intergenic not near genes chr3L 18423772 intergenic not near genes chr3L 18423843 intergenic not near genes chr3L_8_18420001 chr3L_18420001 RAL-913 2818 chr3L 18436021 18436087 chr3L 18436169 18436235 36 147 7.5 9.5 8.5 3.8 214 chr3L 18436021 intergenic not near genes chr3L 18436128 intergenic not near genes chr3L 18436235 intergenic not near genes chr3L_36_18435001 chr3L_18435001 RAL-913 2819 chr3L 18448575 18448619 chr3L 18448717 18448761 22 141 16.0 13.0 14.5 1.4 186 chr3L 18448575 intergenic not near genes chr3L 18448668 intergenic not near genes chr3L 18448761 intergenic not near genes chr3L_22_18445001 chr3L_18445001 RAL-913 2820 chr3L 18456225 18456303 chr3L 18456363 18456441 22 138 10.0 12.5 11.2 1.8 216 chr3L 18456225 intergenic CR44670 - chr3L 18456333 intergenic CR44670 - chr3L 18456441 3` UTR CR44670 - chr3L_22_18455001 chr3L_18455001 RAL-913 2821 chr3L 18501313 18501372 chr3L 18501476 18501535 15 162 17.5 20.0 18.8 0.8 222 chr3L 18501313 intron AstC-R2 - chr3L 18501424 intron AstC-R2 - chr3L 18501535 intron AstC-R2 - chr3L_15_18500001 chr3L_18500001 RAL-913 2822 chr3L 18506092 18506153 chr3L 18509605 18509666 F-element 32 3513 9.0 13.0 11.0 2.7 3574 chr3L 18506092 intergenic not near genes chr3L 18507879 intergenic not near genes chr3L 18509666 intergenic not near genes chr3L_32_18505001 chr3L_18505001 RAL-913 2823 chr3L 18514870 18514917 chr3L 18520111 18520158 BS 8 5240 29.0 25.0 27.0 0.3 5288 chr3L 18514870 intergenic not near genes chr3L 18517514 intergenic not near genes chr3L 18520158 intergenic not near genes chr3L_8_18515001 chr3L_18515001 RAL-913 2824 chr3L 18528592 18528652 chr3L 18537803 18537863 roo 30 9211 7.0 9.0 8.0 3.3 9271 chr3L 18528592 intergenic not near genes chr3L 18533228 intergenic not near genes chr3L 18537863 intergenic not near genes chr3L_30_18530001 chr3L_18530001 RAL-913 2825 chr3L 18546240 18546312 chr3L 18546369 18546421 12 127 32.5 29.5 31.0 0.4 181 chr3L 18546240 intergenic not near genes chr3L 18546330 intergenic not near genes chr3L 18546421 intergenic not near genes chr3L_12_18545001 chr3L_18545001 RAL-913 2826 chr3L 18548939 18548982 chr3L 18549067 18549111 8 128 25.0 32.5 28.8 0.3 172 chr3L 18548939 intergenic not near genes chr3L 18549025 intergenic not near genes chr3L 18549111 intergenic not near genes chr3L_8_18545001 chr3L_18545001 RAL-913 2827 chr3L 18549779 18549831 chr3L 18549920 18549984 5 143 12.0 5.5 8.8 0.5 205 chr3L 18549779 intergenic not near genes chr3L 18549882 intergenic not near genes chr3L 18549984 intergenic not near genes chr3L_5_18545001 chr3L_18545001 RAL-913 2828 chr3L 18566984 18567053 chr3L 18567120 18567185 7 135 22.0 22.0 22.0 0.3 201 chr3L 18566984 intron AstC-R1 + chr3L 18567084 intron AstC-R1 + chr3L 18567185 intron AstC-R1 + chr3L_7_18565001 chr3L_18565001 RAL-913 2829 chr3L 18571460 18571489 chr3L 18571593 18571622 5 133 12.0 7.5 9.8 0.5 162 chr3L 18571460 intron AstC-R1 + chr3L 18571541 intron AstC-R1 + chr3L 18571622 intron AstC-R1 + chr3L_5_18570001 chr3L_18570001 RAL-913 2830 chr3L 18579523 18579592 chr3L 18579701 18579769 24 178 25.5 24.0 24.8 0.9 246 chr3L 18579523 intergenic not near genes chr3L 18579646 intergenic not near genes chr3L 18579769 intergenic not near genes chr3L_24_18575001 chr3L_18575001 RAL-913 2831 chr3L 18593905 18593978 chr3L 18595935 18596011 Doc 21 2031 11.0 8.5 9.8 1.9 2106 chr3L 18593905 intergenic term - chr3L 18594958 intergenic not near genes chr3L 18596011 intergenic CR45389 + chr3L_21_18590001 chr3L_18590001 RAL-913 2832 chr3L 18603137 18603167 chr3L 18603266 18603297 7 128 17.5 31.5 24.5 0.3 160 chr3L 18603137 intron,intron CG13380 -,CG4174 - chr3L 18603217 intron,intron CG13380 -,CG4174 - chr3L 18603297 intron,intron CG13380 -,CG4174 - chr3L_7_18600001 chr3L_18600001 RAL-913 2833 chr3L 18638542 18638603 chr3L 18638685 18638747 29 144 13.5 8.0 10.8 2.5 205 chr3L 18638542 intron MYPT-75D + chr3L 18638644 intron MYPT-75D + chr3L 18638747 intron MYPT-75D + chr3L_29_18635001 chr3L_18635001 RAL-913 2834 chr3L 18701100 18701155 chr3L 18701238 18701293 16 137 22.0 22.0 22.0 0.7 193 chr3L 18701100 intergenic not near genes chr3L 18701196 intergenic not near genes chr3L 18701293 intergenic not near genes chr3L_16_18700001 chr3L_18700001 RAL-913 2835 chr3L 18705379 18705433 chr3L 18705517 18705565 8 136 28.0 20.5 24.2 0.3 186 chr3L 18705379 intergenic not near genes chr3L 18705472 intergenic not near genes chr3L 18705565 intergenic not near genes chr3L_8_18705001 chr3L_18705001 RAL-913 2836 chr3L 18710715 18710783 chr3L 18718717 18718785 Stalker2 26 8002 9.0 10.0 9.5 2.5 8070 chr3L 18710715 intergenic not near genes chr3L 18714750 intergenic not near genes chr3L 18718785 intergenic not near genes chr3L_26_18710001 chr3L_18710001 RAL-913 2837 chr3L 18721722 18721793 chr3L 18721863 18721934 18 141 22.0 22.0 22.0 0.8 212 chr3L 18721722 intergenic CG12477 - chr3L 18721828 intergenic CG12477 - chr3L 18721934 3` UTR CG12477 - chr3L_18_18720001 chr3L_18720001 RAL-913 2838 chr3L 18725023 18725083 chr3L 18725689 18725749 17 666 11.0 26.0 18.5 0.9 726 chr3L 18725023 intergenic not near genes chr3L 18725386 intergenic not near genes chr3L 18725749 intergenic not near genes chr3L_17_18725001 chr3L_18725001 RAL-913 2839 chr3L 18736011 18736055 chr3L 18736156 18736200 23 145 21.0 22.0 21.5 1.0 189 chr3L 18736011 intergenic not near genes chr3L 18736106 intergenic not near genes chr3L 18736200 intergenic not near genes chr3L_23_18735001 chr3L_18735001 RAL-913 2840 chr3L 18743504 18743520 chr3L 18743661 18743677 5 157 0.0 20.5 10.2 0.4 173 chr3L 18743504 intergenic not near genes chr3L 18743590 intergenic not near genes chr3L 18743677 intergenic not near genes chr3L_5_18740001 chr3L_18740001 RAL-913 2841 chr3L 15416952 15416953 chr3L 18743738 18743739 4 3326786 27.0 41.5 34.2 0.1 3326787 chr3L 15416952 intergenic not near genes chr3L 17080346 intron Rbp6 - chr3L 18743739 intergenic not near genes chr3L_4_17080001 chr3L_17080001 RAL-913 2842 chr3L 18753500 18753560 chr3L 18753632 18753692 13 132 11.5 8.5 10.0 1.2 192 chr3L 18753500 intron ftz-f1 - chr3L 18753596 intron ftz-f1 - chr3L 18753692 intron ftz-f1 - chr3L_13_18750001 chr3L_18750001 RAL-913 2843 chr3L 18765440 18765493 chr3L 18765603 18765626 13 158 12.0 17.0 14.5 0.8 186 chr3L 18765440 intron ftz-f1 - chr3L 18765533 intron ftz-f1 - chr3L 18765626 intron ftz-f1 - chr3L_13_18765001 chr3L_18765001 RAL-913 2844 chr3L 18770603 18770662 chr3L 18770738 18770797 7 135 29.5 27.5 28.5 0.2 194 chr3L 18770603 intron ftz-f1 - chr3L 18770700 intron ftz-f1 - chr3L 18770797 intron ftz-f1 - chr3L_7_18770001 chr3L_18770001 RAL-913 2845 chr3L 18772365 18772431 chr3L 18781096 18781162 roo 36 8731 12.5 13.0 12.8 2.6 8797 chr3L 18772365 intron ftz-f1 - chr3L 18776764 intron ftz-f1 - chr3L 18781162 intron ftz-f1 - chr3L_36_18775001 chr3L_18775001 RAL-913 2846 chr3L 18784346 18784404 chr3L 18784485 18784543 17 139 14.5 17.5 16.0 1.0 197 chr3L 18784346 intron ftz-f1 - chr3L 18784444 intron ftz-f1 - chr3L 18784543 intron ftz-f1 - chr3L_17_18780001 chr3L_18780001 RAL-913 2847 chr3L 18792527 18792597 chr3L 18792659 18792729 14 132 23.5 18.0 20.8 0.6 202 chr3L 18792527 intron ftz-f1 - chr3L 18792628 intron ftz-f1 - chr3L 18792729 intron ftz-f1 - chr3L_14_18790001 chr3L_18790001 RAL-913 2848 chr3L 18810099 18810167 chr3L 18810226 18810294 18 127 31.0 31.5 31.2 0.6 195 chr3L 18810099 intron CG14073 - chr3L 18810196 intron CG14073 - chr3L 18810294 intron CG14073 - chr3L_18_18810001 chr3L_18810001 RAL-913 2849 chr3L 18832586 18832623 chr3L 18832703 18832750 12 126 24.5 23.0 23.8 0.5 164 chr3L 18832586 intron Indy - chr3L 18832668 intron Indy - chr3L 18832750 intron Indy - chr3L_12_18830001 chr3L_18830001 RAL-913 2850 chr3L 18833744 18833803 chr3L 18834958 18835017 1360 27 1212 7.0 11.5 9.2 2.6 1273 chr3L 18833744 intron Indy - chr3L 18834380 intron Indy - chr3L 18835017 intron Indy - chr3L_27_18830001 chr3L_18830001 RAL-913 2851 chr3L 18838476 18838549 chr3L 18838606 18838679 10 128 29.5 29.0 29.2 0.3 203 chr3L 18838476 intron Indy - chr3L 18838578 intron Indy - chr3L 18838679 intron Indy - chr3L_10_18835001 chr3L_18835001 RAL-913 2852 chr3L 18839713 18839767 chr3L 18839831 18839900 8 131 33.5 37.0 35.2 0.2 187 chr3L 18839713 intron Indy - chr3L 18839806 intron Indy - chr3L 18839900 intron Indy - chr3L_8_18835001 chr3L_18835001 RAL-913 2853 chr3L 18840845 18840888 chr3L 18841036 18841079 10 191 18.0 25.5 21.8 0.4 234 chr3L 18840845 intron Indy - chr3L 18840962 intron Indy - chr3L 18841079 intron Indy - chr3L_10_18840001 chr3L_18840001 RAL-913 2854 chr3L 18842363 18842401 chr3L 18842500 18842539 10 138 35.0 29.5 32.2 0.3 176 chr3L 18842363 intron,5` UTR Indy -,CR32027 + chr3L 18842451 intron,5` UTR Indy -,CR32027 + chr3L 18842539 intron,5` UTR Indy -,CR32027 + chr3L_10_18840001 chr3L_18840001 RAL-913 2855 chr3L 18843824 18843884 chr3L 18843972 18844032 16 148 21.5 25.5 23.5 0.7 208 chr3L 18843824 intron Indy - chr3L 18843928 intron Indy - chr3L 18844032 intron Indy - chr3L_16_18840001 chr3L_18840001 RAL-913 2856 chr3L 18860230 18860286 chr3L 18860380 18860437 12 151 28.0 25.5 26.8 0.4 207 chr3L 18860230 intergenic not near genes chr3L 18860334 intergenic not near genes chr3L 18860437 intergenic not near genes chr3L_12_18860001 chr3L_18860001 RAL-913 2857 chr3L 18866860 18866901 chr3L 18867639 18867680 9 782 36.0 29.5 32.8 0.3 820 chr3L 18866860 exon CG14074 + chr3L 18867270 exon CG14074 + chr3L 18867680 intergenic Dysb +,CG14074 + chr3L_9_18865001 chr3L_18865001 RAL-913 2858 chr3L 18888392 18888452 chr3L 18888524 18888584 13 132 14.5 13.5 14.0 0.9 192 chr3L 18888392 intron CG3961 - chr3L 18888488 intron CG3961 - chr3L 18888584 intron CG3961 - chr3L_13_18885001 chr3L_18885001 RAL-913 2859 chr3L 18924435 18924504 chr3L 18924561 18924630 14 126 11.0 15.5 13.2 1.0 195 chr3L 18924435 intron CG32204 - chr3L 18924532 intron CG32204 - chr3L 18924630 intron CG32204 - chr3L_14_18920001 chr3L_18920001 RAL-913 2860 chr3L 18928876 18928893 chr3L 18929005 18929023 4 130 22.5 25.5 24.0 0.2 147 chr3L 18928876 intron CG32204 - chr3L 18928950 intron CG32204 - chr3L 18929023 intron CG32204 - chr3L_4_18925001 chr3L_18925001 RAL-913 2861 chr3L 18929918 18929985 chr3L 18930053 18930119 13 131 22.0 24.5 23.2 0.5 201 chr3L 18929918 intron CG32204 - chr3L 18930018 intron CG32204 - chr3L 18930119 exon CG32204 - chr3L_13_18930001 chr3L_18930001 RAL-913 2862 chr3L 18933578 18933660 chr3L 18933722 18933803 42 143 7.5 7.0 7.2 5.1 225 chr3L 18933578 intron CG32204 - chr3L 18933690 intron CG32204 - chr3L 18933803 intron CG32204 - chr3L_42_18930001 chr3L_18930001 RAL-913 2863 chr3L 18963679 18963695 chr3L 18963813 18963829 6 134 22.5 29.5 26.0 0.2 150 chr3L 18963679 intergenic not near genes chr3L 18963754 intergenic not near genes chr3L 18963829 intergenic not near genes chr3L_6_18960001 chr3L_18960001 RAL-913 2864 chr3L 18969515 18969573 chr3L 18969640 18969699 24 126 17.0 16.0 16.5 1.4 184 chr3L 18969515 intergenic not near genes chr3L 18969607 intergenic not near genes chr3L 18969699 intergenic not near genes chr3L_24_18965001 chr3L_18965001 RAL-913 2865 chr3L 19008805 19008808 chr3L 19009192 19009193 jockey 4 386 23.0 10.0 16.5 0.2 388 chr3L 19008805 intron nkd - chr3L 19008999 intron nkd - chr3L 19009193 intron nkd - chr3L_4_19005001 chr3L_19005001 RAL-913 2866 chr3L 19008811 19008864 chr3L 19009190 19009214 jockey 9 380 11.5 9.0 10.2 0.8 403 chr3L 19008811 intron nkd - chr3L 19009012 intron nkd - chr3L 19009214 intron nkd - chr3L_9_19005001 chr3L_19005001 RAL-913 2867 chr3L 19015126 19015182 chr3L 19015261 19015316 14 135 14.0 3.5 8.8 1.4 190 chr3L 19015126 intron nkd - chr3L 19015221 intron nkd - chr3L 19015316 intron nkd - chr3L_14_19015001 chr3L_19015001 RAL-913 2868 chr3L 19029407 19029441 chr3L 19029559 19029578 7 150 16.0 15.5 15.8 0.4 171 chr3L 19029407 intron nkd - chr3L 19029492 intron nkd - chr3L 19029578 intron nkd - chr3L_7_19025001 chr3L_19025001 RAL-913 2869 chr3L 19029448 19029476 chr3L 19029555 19029593 7 139 14.0 14.5 14.2 0.5 145 chr3L 19029448 intron nkd - chr3L 19029520 intron nkd - chr3L 19029593 intron nkd - chr3L_7_19025001 chr3L_19025001 RAL-913 2870 chr3L 19075712 19075769 chr3L 19075934 19075991 15 220 29.0 29.5 29.2 0.5 279 chr3L 19075712 intron Mkp3 - chr3L 19075852 intron Mkp3 - chr3L 19075991 intron Mkp3 - chr3L_15_19075001 chr3L_19075001 RAL-913 2871 chr3L 19081987 19082066 chr3L 19082139 19082203 26 150 28.0 24.5 26.2 1.0 216 chr3L 19081987 intron Mkp3 - chr3L 19082095 intron Mkp3 - chr3L 19082203 intron Mkp3 - chr3L_26_19080001 chr3L_19080001 RAL-913 2872 chr3L 19091123 19091181 chr3L 19091270 19091328 11 147 30.5 21.5 26.0 0.4 205 chr3L 19091123 intergenic CR45386 + chr3L 19091226 intergenic CR45386 + chr3L 19091328 intergenic CR45386 + chr3L_11_19090001 chr3L_19090001 RAL-913 2873 chr3L 19101680 19101730 chr3L 19102101 19102152 19 422 16.5 20.0 18.2 1.0 472 chr3L 19101680 intergenic not near genes chr3L 19101916 intergenic not near genes chr3L 19102152 intergenic not near genes chr3L_19_19100001 chr3L_19100001 RAL-913 2874 chr3L 19111319 19111359 chr3L 19111456 19111495 16 135 19.0 20.5 19.8 0.8 176 chr3L 19111319 intron CG14082 - chr3L 19111407 intron CG14082 - chr3L 19111495 intron CG14082 - chr3L_16_19110001 chr3L_19110001 RAL-913 2875 chr3L 19115606 19115663 chr3L 19115825 19115891 BS 11 223 12.5 10.5 11.5 0.9 285 chr3L 19115606 intron CG14082 - chr3L 19115748 intron CG14082 - chr3L 19115891 intron CG14082 - chr3L_11_19115001 chr3L_19115001 RAL-913 2876 chr3L 19116998 19117046 chr3L 19124495 19124543 mdg1 21 7495 14.5 9.0 11.8 1.6 7545 chr3L 19116998 intron CG14082 - chr3L 19120770 intron CG14082 - chr3L 19124543 intron CG14082 - chr3L_21_19120001 chr3L_19120001 RAL-913 2877 chr3L 19117050 19117070 chr3L 19124487 19124567 mdg1 8 7485 11.0 7.5 9.2 0.8 7517 chr3L 19117050 intron CG14082 - chr3L 19120808 intron CG14082 - chr3L 19124567 intron CG14082 - chr3L_8_19120001 chr3L_19120001 RAL-913 2878 chr3L 19138512 19138555 chr3L 19138643 19138656 8 127 22.0 18.5 20.2 0.4 144 chr3L 19138512 intron CG14082 - chr3L 19138584 intron CG14082 - chr3L 19138656 intron CG14082 - chr3L_8_19135001 chr3L_19135001 RAL-913 2879 chr3L 19138556 19138582 chr3L 19138637 19138698 6 118 18.0 18.5 18.2 0.3 142 chr3L 19138556 intron CG14082 - chr3L 19138627 intron CG14082 - chr3L 19138698 intron CG14082 - chr3L_6_19135001 chr3L_19135001 RAL-913 2880 chr3L 19173671 19173744 chr3L 19173872 19173931 13 191 15.5 16.0 15.8 0.8 260 chr3L 19173671 intron fz2 - chr3L 19173801 intron fz2 - chr3L 19173931 intron fz2 - chr3L_13_19170001 chr3L_19170001 RAL-913 2881 chr3L 19182336 19182412 chr3L 19182468 19182538 28 131 6.5 4.5 5.5 4.3 202 chr3L 19182336 intron fz2 - chr3L 19182437 intron fz2 - chr3L 19182538 intron fz2 - chr3L_28_19180001 chr3L_19180001 RAL-913 2882 chr3L 19186744 19186791 chr3L 19186910 19186957 10 162 24.0 26.0 25.0 0.4 213 chr3L 19186744 intron fz2 - chr3L 19186850 intron fz2 - chr3L 19186957 intron fz2 - chr3L_10_19185001 chr3L_19185001 RAL-913 2883 chr3L 19192576 19192625 chr3L 19192707 19192756 7 128 29.5 28.0 28.8 0.2 180 chr3L 19192576 intron fz2 - chr3L 19192666 intron fz2 - chr3L 19192756 intron fz2 - chr3L_7_19190001 chr3L_19190001 RAL-913 2884 chr3L 19198730 19198791 chr3L 19198858 19198924 15 132 17.5 20.0 18.8 0.8 194 chr3L 19198730 intron fz2 - chr3L 19198827 intron fz2 - chr3L 19198924 intron fz2 - chr3L_15_19195001 chr3L_19195001 RAL-913 2885 chr3L 19206756 19206816 chr3L 19206886 19206946 9 130 20.5 23.5 22.0 0.4 190 chr3L 19206756 intron fz2 - chr3L 19206851 intron fz2 - chr3L 19206946 intron fz2 - chr3L_9_19205001 chr3L_19205001 RAL-913 2886 chr3L 19208012 19208082 chr3L 19209436 19209458 Doc 22 1419 8.5 3.5 6.0 3.1 1446 chr3L 19208012 intron fz2 - chr3L 19208735 intron fz2 - chr3L 19209458 intron fz2 - chr3L_22_19205001 chr3L_19205001 RAL-913 2887 chr3L 19210065 19210140 chr3L 19210211 19210276 25 145 0.0 5.5 2.8 6.6 211 chr3L 19210065 intron fz2 - chr3L 19210170 intron fz2 - chr3L 19210276 intron fz2 - chr3L_25_19210001 chr3L_19210001 RAL-913 2888 chr3L 19220633 19220633 chr3L 22908066 22908067 6 3687433 39.5 43.5 41.5 0.1 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_6_21060001 chr3L_21060001 RAL-913 2889 chr3L 19220634 19220635 chr3L 22908066 22908066 7 3687432 39.0 43.5 41.2 0.2 3687432 chr3L 19220634 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_7_21060001 chr3L_21060001 RAL-913 2890 chr3L 19220637 19220637 chr3L 22908066 22908067 9 3687429 39.5 43.5 41.5 0.2 3687430 chr3L 19220637 intron fz2 - chr3L 21064352 intron siz + chr3L 22908067 intergenic not near genes chr3L_9_21060001 chr3L_21060001 RAL-913 2891 chr3L 19222322 19222396 chr3L 19222493 19222567 17 171 24.0 24.5 24.2 0.7 245 chr3L 19222322 intron fz2 - chr3L 19222444 intron fz2 - chr3L 19222567 intron fz2 - chr3L_17_19220001 chr3L_19220001 RAL-913 2892 chr3L 19238679 19238748 chr3L 19238836 19238905 32 157 24.0 22.0 23.0 1.3 226 chr3L 19238679 intergenic not near genes chr3L 19238792 intergenic not near genes chr3L 19238905 intergenic not near genes chr3L_32_19235001 chr3L_19235001 RAL-913 2893 chr3L 19244069 19244128 chr3L 19244197 19244247 14 123 10.5 11.5 11.0 1.2 178 chr3L 19244069 intergenic not near genes chr3L 19244158 intergenic not near genes chr3L 19244247 intergenic not near genes chr3L_14_19240001 chr3L_19240001 RAL-913 2894 chr3L 19250900 19250912 chr3L 19251178 19251190 4 278 27.0 22.0 24.5 0.2 290 chr3L 19250900 intergenic not near genes chr3L 19251045 intergenic not near genes chr3L 19251190 intergenic not near genes chr3L_4_19250001 chr3L_19250001 RAL-913 2895 chr3L 19269769 19269833 chr3L 19270023 19270087 17 252 18.5 18.0 18.2 0.9 318 chr3L 19269769 intron CG14085 + chr3L 19269928 intron,exon CG14085 +,CG14088 - chr3L 19270087 intron,exon CG14085 +,CG14088 - chr3L_17_19265001 chr3L_19265001 RAL-913 2896 chr3L 19295097 19295168 chr3L 19295466 19295537 17 369 12.5 27.0 19.8 0.8 440 chr3L 19295097 5` UTR fal + chr3L 19295317 intron fal + chr3L 19295537 intron fal + chr3L_17_19295001 chr3L_19295001 RAL-913 2897 chr3L 19339857 19339920 chr3L 19339981 19340017 9 116 15.5 17.5 16.5 0.5 160 chr3L 19339857 intergenic CG32206 - chr3L 19339937 intergenic CG32206 - chr3L 19340017 intergenic CG32206 - chr3L_9_19335001 chr3L_19335001 RAL-913 2898 chr3L 19342710 19342771 chr3L 19342851 19342912 17 141 19.5 20.0 19.8 0.8 202 chr3L 19342710 3` UTR CG32206 - chr3L 19342811 3` UTR CG32206 - chr3L 19342912 3` UTR CG32206 - chr3L_17_19340001 chr3L_19340001 RAL-913 2899 chr3L 19346823 19346878 chr3L 19346959 19347007 12 132 11.5 23.0 17.2 0.7 184 chr3L 19346823 intron CG32206 - chr3L 19346915 intron CG32206 - chr3L 19347007 intron CG32206 - chr3L_12_19345001 chr3L_19345001 RAL-913 2900 chr3L 19387736 19387751 chr3L 19387884 19387899 5 148 36.5 30.5 33.5 0.1 163 chr3L 19387736 intron,exon CG32206 -,ms(3)76Ba + chr3L 19387818 intron,intron CG32206 -,ms(3)76Ba + chr3L 19387899 intron,intron CG32206 -,ms(3)76Ba + chr3L_5_19385001 chr3L_19385001 RAL-913 2901 chr3L 19390310 19390387 chr3L 19390524 19390601 15 210 30.5 31.0 30.8 0.5 291 chr3L 19390310 intron CG32206 - chr3L 19390456 intron CG32206 - chr3L 19390601 intron CG32206 - chr3L_15_19390001 chr3L_19390001 RAL-913 2902 chr3L 19390685 19390736 chr3L 19390833 19390884 20 147 22.0 21.0 21.5 0.9 199 chr3L 19390685 intron CG32206 - chr3L 19390784 intron CG32206 - chr3L 19390884 intron CG32206 - chr3L_20_19390001 chr3L_19390001 RAL-913 2903 chr3L 19398891 19398928 chr3L 19403658 19403689 F-element 14 4764 6.0 7.5 6.8 1.8 4798 chr3L 19398891 intron CG32206 - chr3L 19401290 intron CG32206 - chr3L 19403689 intron CG32206 - chr3L_14_19400001 chr3L_19400001 RAL-913 2904 chr3L 19417763 19417833 chr3L 19417893 19417923 9 120 21.0 16.0 18.5 0.5 160 chr3L 19417763 intergenic not near genes chr3L 19417843 intergenic not near genes chr3L 19417923 intergenic not near genes chr3L_9_19415001 chr3L_19415001 RAL-913 2905 chr3L 19426707 19426775 chr3L 19426835 19426861 15 123 19.5 16.0 17.8 0.8 154 chr3L 19426707 intergenic not near genes chr3L 19426784 intergenic not near genes chr3L 19426861 intergenic not near genes chr3L_15_19425001 chr3L_19425001 RAL-913 2906 chr3L 19430342 19430414 chr3L 19430478 19430542 17 135 22.5 19.0 20.8 0.8 200 chr3L 19430342 intergenic not near genes chr3L 19430442 intergenic not near genes chr3L 19430542 intergenic not near genes chr3L_17_19430001 chr3L_19430001 RAL-913 2907 chr3L 19439131 19439196 chr3L 19439260 19439325 20 129 20.5 24.5 22.5 0.9 194 chr3L 19439131 intergenic not near genes chr3L 19439228 intergenic not near genes chr3L 19439325 intergenic not near genes chr3L_20_19435001 chr3L_19435001 RAL-913 2908 chr3L 19451051 19451125 chr3L 19451586 19451660 16 529 17.0 30.0 23.5 0.7 609 chr3L 19451051 intergenic not near genes chr3L 19451356 intergenic not near genes chr3L 19451660 intergenic not near genes chr3L_16_19450001 chr3L_19450001 RAL-913 2909 chr3L 19460379 19460430 chr3L 19460512 19460563 11 132 21.5 26.5 24.0 0.4 184 chr3L 19460379 intergenic not near genes chr3L 19460471 intergenic not near genes chr3L 19460563 intergenic not near genes chr3L_11_19460001 chr3L_19460001 RAL-913 2910 chr3L 19488476 19488501 chr3L 19488608 19488633 11 132 12.5 20.0 16.2 0.6 157 chr3L 19488476 intergenic pncr009:3L -,CG32212 + chr3L 19488554 intergenic pncr009:3L -,CG32212 + chr3L 19488633 intergenic pncr009:3L -,CG32212 + chr3L_11_19485001 chr3L_19485001 RAL-913 2911 chr3L 19495893 19495948 chr3L 19496022 19496072 7 132 25.0 30.0 27.5 0.2 179 chr3L 19495893 intron CG9449 - chr3L 19495982 intron CG9449 - chr3L 19496072 intron CG9449 - chr3L_7_19495001 chr3L_19495001 RAL-913 2912 chr3L 19554771 19554842 chr3L 19554916 19554986 15 143 21.5 20.0 20.8 0.7 215 chr3L 19554771 intergenic CG9300 + chr3L 19554878 intergenic CG9300 + chr3L 19554986 intergenic CG9300 + chr3L_15_19550001 chr3L_19550001 RAL-913 2913 chr3L 19575138 19575207 chr3L 19575268 19575337 21 129 26.0 28.0 27.0 0.8 199 chr3L 19575138 intron Shal - chr3L 19575238 intron Shal - chr3L 19575337 intron Shal - chr3L_21_19575001 chr3L_19575001 RAL-913 2914 chr3L 19641322 19641389 chr3L 19641469 19641538 14 148 20.5 24.5 22.5 0.6 216 chr3L 19641322 intron CG8786 - chr3L 19641430 intron CG8786 - chr3L 19641538 intron CG8786 - chr3L_14_19640001 chr3L_19640001 RAL-913 2915 chr3L 19657584 19657600 chr3L 19657713 19657729 6 129 23.5 24.0 23.8 0.2 145 chr3L 19657584 intron tey - chr3L 19657656 intron tey - chr3L 19657729 intron tey - chr3L_6_19655001 chr3L_19655001 RAL-913 2916 chr3L 19664271 19664335 chr3L 19664406 19664470 12 135 28.5 31.5 30.0 0.4 199 chr3L 19664271 intergenic tey - chr3L 19664370 intergenic tey - chr3L 19664470 intergenic tey - chr3L_12_19660001 chr3L_19660001 RAL-913 2917 chr3L 19684942 19685007 chr3L 19685132 19685177 13 172 24.0 24.5 24.2 0.5 235 chr3L 19684942 exon CG8765 - chr3L 19685060 exon CG8765 - chr3L 19685177 exon CG8765 - chr3L_13_19685001 chr3L_19685001 RAL-913 2918 chr3L 19695429 19695457 chr3L 19695513 19695590 11 125 10.5 10.5 10.5 1.0 161 chr3L 19695429 intergenic verm - chr3L 19695510 intergenic verm - chr3L 19695590 intergenic verm - chr3L_11_19695001 chr3L_19695001 RAL-913 2919 chr3L 19820253 19820319 chr3L 19827852 19827918 412 28 7599 5.5 13.0 9.2 2.7 7665 chr3L 19820253 intron Deaf1 + chr3L 19824086 intron Deaf1 + chr3L 19827918 intron Deaf1 + chr3L_28_19820001 chr3L_19820001 RAL-913 2920 chr3L 19848470 19848527 chr3L 19857710 19857768 roo 22 9240 12.0 9.0 10.5 1.9 9298 chr3L 19848470 intron Papss + chr3L 19853119 intron Papss + chr3L 19857768 intron Papss + chr3L_22_19850001 chr3L_19850001 RAL-913 2921 chr3L 19861777 19861850 chr3L 19863615 19863679 S-element 33 1836 6.5 8.5 7.5 3.9 1902 chr3L 19861777 5` UTR CR45433 + chr3L 19862728 intergenic not near genes chr3L 19863679 intergenic not near genes chr3L_33_19860001 chr3L_19860001 RAL-913 2922 chr3L 19933487 19933557 chr3L 19934359 19934429 25 872 19.5 25.0 22.2 1.1 942 chr3L 19933487 intergenic CR45678 + chr3L 19933958 5` UTR CR45678 + chr3L 19934429 intergenic CR45678 + chr3L_25_19930001 chr3L_19930001 RAL-913 2923 chr3L 19942867 19942936 chr3L 19943133 19943202 14 265 30.0 25.0 27.5 0.5 335 chr3L 19942867 intron Ac76E + chr3L 19943034 intron Ac76E + chr3L 19943202 intron Ac76E + chr3L_14_19940001 chr3L_19940001 RAL-913 2924 chr3L 19960298 19960350 chr3L 19960461 19960522 14 178 14.0 26.0 20.0 0.7 224 chr3L 19960298 intron Ac76E + chr3L 19960410 intron Ac76E + chr3L 19960522 intron Ac76E + chr3L_14_19960001 chr3L_19960001 RAL-913 2925 chr3L 19960805 19960854 chr3L 19961520 19961569 4 715 28.5 16.0 22.2 0.2 764 chr3L 19960805 intron Ac76E + chr3L 19961187 intron Ac76E + chr3L 19961569 intron Ac76E + chr3L_4_19960001 chr3L_19960001 RAL-913 2926 chr3L 19961231 19961295 chr3L 19961492 19961548 23 257 7.0 8.5 7.8 2.6 317 chr3L 19961231 intron Ac76E + chr3L 19961390 intron Ac76E + chr3L 19961548 intron Ac76E + chr3L_23_19960001 chr3L_19960001 RAL-913 2927 chr3L 19962922 19962935 chr3L 19963050 19963063 6 128 12.0 18.5 15.2 0.4 141 chr3L 19962922 intron Ac76E + chr3L 19962992 intron Ac76E + chr3L 19963063 intron Ac76E + chr3L_6_19960001 chr3L_19960001 RAL-913 2928 chr3L 19962944 19962976 chr3L 19963040 19963084 14 124 13.0 17.5 15.2 0.9 140 chr3L 19962944 intron Ac76E + chr3L 19963014 intron Ac76E + chr3L 19963084 intron Ac76E + chr3L_14_19960001 chr3L_19960001 RAL-913 2929 chr3L 19981160 19981235 chr3L 19981290 19981365 42 130 10.0 12.0 11.0 3.5 205 chr3L 19981160 intergenic not near genes chr3L 19981262 intergenic CG17732 + chr3L 19981365 intergenic CG17732 + chr3L_42_19980001 chr3L_19980001 RAL-913 2930 chr3L 19992063 19992111 chr3L 19992187 19992238 12 126 23.5 21.0 22.2 0.5 175 chr3L 19992063 intron,intron CG7646 +,Nca + chr3L 19992150 intron,intron CG7646 +,Nca + chr3L 19992238 intron,intron CG7646 +,Nca + chr3L_12_19990001 chr3L_19990001 RAL-913 2931 chr3L 20094636 20094706 chr3L 20094868 20094938 15 228 18.0 18.5 18.2 0.8 302 chr3L 20094636 intergenic not near genes chr3L 20094787 intergenic not near genes chr3L 20094938 intergenic not near genes chr3L_15_20090001 chr3L_20090001 RAL-913 2932 chr3L 20096050 20096093 chr3L 20096204 20096227 5 146 29.0 10.5 19.8 0.2 177 chr3L 20096050 intergenic not near genes chr3L 20096138 intergenic not near genes chr3L 20096227 intergenic not near genes chr3L_5_20095001 chr3L_20095001 RAL-913 2933 chr3L 20113439 20113501 chr3L 20113579 20113646 26 145 11.0 13.0 12.0 2.0 207 chr3L 20113439 intergenic not near genes chr3L 20113542 intergenic not near genes chr3L 20113646 intergenic not near genes chr3L_26_20110001 chr3L_20110001 RAL-913 2934 chr3L 20113616 20113676 chr3L 20122923 20122983 roo 25 9307 13.0 8.0 10.5 2.2 9367 chr3L 20113616 intergenic not near genes chr3L 20118300 intergenic not near genes chr3L 20122983 intergenic not near genes chr3L_25_20115001 chr3L_20115001 RAL-913 2935 chr3L 20143040 20143103 chr3L 20143170 20143233 16 130 20.0 22.0 21.0 0.7 193 chr3L 20143040 intergenic not near genes chr3L 20143136 intergenic not near genes chr3L 20143233 intergenic not near genes chr3L_16_20140001 chr3L_20140001 RAL-913 2936 chr3L 20143613 20143681 chr3L 20143769 20143837 8 156 22.5 31.0 26.8 0.3 224 chr3L 20143613 intergenic not near genes chr3L 20143725 intergenic not near genes chr3L 20143837 intergenic not near genes chr3L_8_20140001 chr3L_20140001 RAL-913 2937 chr3L 20148237 20148315 chr3L 20148377 20148455 24 138 16.5 16.0 16.2 1.4 218 chr3L 20148237 intergenic not near genes chr3L 20148346 intergenic not near genes chr3L 20148455 intergenic not near genes chr3L_24_20145001 chr3L_20145001 RAL-913 2938 chr3L 20156114 20156186 chr3L 20156286 20156358 13 172 20.5 13.0 16.8 0.7 244 chr3L 20156114 intron CG42674 - chr3L 20156236 intron CG42674 - chr3L 20156358 intron CG42674 - chr3L_13_20155001 chr3L_20155001 RAL-913 2939 chr3L 20166159 20166231 chr3L 20166292 20166370 31 136 5.5 10.0 7.8 3.5 211 chr3L 20166159 intron CG42674 - chr3L 20166264 intron CG42674 - chr3L 20166370 intron CG42674 - chr3L_31_20165001 chr3L_20165001 RAL-913 2940 chr3L 20187416 20187485 chr3L 20187545 20187614 35 129 39.5 41.5 40.5 0.8 198 chr3L 20187416 intron CG42674 - chr3L 20187515 intron CG42674 - chr3L 20187614 intron CG42674 - chr3L_35_20185001 chr3L_20185001 RAL-913 2941 chr3L 20212563 20212581 chr3L 20218190 20218208 mdg3 10 5626 20.0 2.5 11.2 0.8 5645 chr3L 20212563 intergenic CG7017 - chr3L 20215386 intergenic not near genes chr3L 20218208 intergenic CG6933 - chr3L_10_20215001 chr3L_20215001 RAL-913 2942 chr3L 20218182 20218222 chr3L 20218348 20218388 18 166 6.0 25.5 15.8 1.1 206 chr3L 20218182 intergenic CG6933 - chr3L 20218285 intergenic CG6933 - chr3L 20218388 intergenic CG6933 - chr3L_18_20215001 chr3L_20215001 RAL-913 2943 chr3L 20257284 20257347 chr3L 20258455 20258517 pogo 35 1169 12.0 11.5 11.8 2.7 1233 chr3L 20257284 intron rdgC + chr3L 20257900 intron rdgC + chr3L 20258517 intron rdgC + chr3L_35_20255001 chr3L_20255001 RAL-913 2944 chr3L 20277256 20277312 chr3L 20277368 20277444 18 124 24.0 27.0 25.5 0.7 188 chr3L 20277256 exon gogo - chr3L 20277350 intron gogo - chr3L 20277444 intron gogo - chr3L_18_20275001 chr3L_20275001 RAL-913 2945 chr3L 20283631 20283704 chr3L 20283765 20283838 22 134 7.5 4.5 6.0 3.1 207 chr3L 20283631 intron gogo - chr3L 20283734 intron gogo - chr3L 20283838 intron gogo - chr3L_22_20280001 chr3L_20280001 RAL-913 2946 chr3L 20321113 20321113 chr3L 20342868 20342905 17.6 6 21762 10.0 51.5 30.8 0.2 21792 chr3L 20321113 exon Spn77Bb + chr3L 20332009 intergenic not near genes chr3L 20342905 exon Spn77Bc + chr3L_6_20330001 chr3L_20330001 RAL-913 2947 chr3L 20345563 20345595 chr3L 20345694 20345724 18 130 16.0 8.5 12.2 1.4 161 chr3L 20345563 intergenic Rbbp5 - chr3L 20345644 intergenic Rbbp5 - chr3L 20345724 intergenic Rbbp5 - chr3L_18_20345001 chr3L_20345001 RAL-913 2948 chr3L 20345597 20345628 chr3L 20345693 20345759 11 128 7.5 8.0 7.8 1.2 162 chr3L 20345597 intergenic Rbbp5 - chr3L 20345678 intergenic Rbbp5 - chr3L 20345759 3` UTR Rbbp5 - chr3L_11_20345001 chr3L_20345001 RAL-913 2949 chr3L 20386894 20386971 chr3L 20387046 20387123 27 152 8.5 8.0 8.2 2.9 229 chr3L 20386894 intron fbl + chr3L 20387008 intron fbl + chr3L 20387123 intron fbl + chr3L_27_20385001 chr3L_20385001 RAL-913 2950 chr3L 20422499 20422539 chr3L 20422601 20422672 9 123 18.5 19.0 18.8 0.5 173 chr3L 20422499 exon zye + chr3L 20422586 exon zye + chr3L 20422672 exon zye + chr3L_9_20420001 chr3L_20420001 RAL-913 2951 chr3L 20462536 20462597 chr3L 20462667 20462728 36 130 24.5 26.5 25.5 1.4 192 chr3L 20462536 intron atk - chr3L 20462632 intron atk - chr3L 20462728 intron atk - chr3L_36_20460001 chr3L_20460001 RAL-913 2952 chr3L 20476714 20476770 chr3L 20484363 20484419 springer 37 7649 13.0 12.5 12.8 2.7 7705 chr3L 20476714 3` UTR isoQC + chr3L 20480566 intergenic not near genes chr3L 20484419 3` UTR ZnT77C - chr3L_37_20480001 chr3L_20480001 RAL-913 2953 chr3L 20487620 20487673 chr3L 20488121 20488174 INE-1 14 500 20.0 20.0 20.0 0.7 554 chr3L 20487620 intron ZnT77C - chr3L 20487897 intron ZnT77C - chr3L 20488174 exon ZnT77C - chr3L_14_20485001 chr3L_20485001 RAL-913 2954 chr3L 20491914 20491984 chr3L 20492056 20492126 14 142 28.0 28.0 28.0 0.5 212 chr3L 20491914 intron ZnT77C - chr3L 20492020 intron ZnT77C - chr3L 20492126 intron,5` UTR ZnT77C -,CG6020 + chr3L_14_20490001 chr3L_20490001 RAL-913 2955 chr3L 20494692 20494761 chr3L 20494816 20494895 9 130 21.0 21.5 21.2 0.4 203 chr3L 20494692 5` UTR,intron ZnT77C -,CG6020 + chr3L 20494794 5` UTR,intron ZnT77C -,CG6020 + chr3L 20494895 5` UTR,intron ZnT77C -,CG6020 + chr3L_9_20490001 chr3L_20490001 RAL-913 2956 chr3L 20525228 20525228 chr3L 22908066 22908066 6 2382838 36.0 43.5 39.8 0.1 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_6_21715001 chr3L_21715001 RAL-913 2957 chr3L 20525228 20525228 chr3L 24821492 24821494 5 4296265 36.0 31.0 33.5 0.1 4296266 chr3L 20525228 intron CG4825 - chr3L 22673361 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_5_22670001 chr3L_22670001 RAL-913 2958 chr3L 20525229 20525229 chr3L 22908066 22908067 19 2382837 35.5 43.5 39.5 0.5 2382838 chr3L 20525229 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_19_21715001 chr3L_21715001 RAL-913 2959 chr3L 20525229 20525229 chr3L 24821492 24821494 9 4296264 35.5 31.0 33.2 0.3 4296265 chr3L 20525229 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_9_22670001 chr3L_22670001 RAL-913 2960 chr3L 20525230 20525230 chr3L 22908066 22908067 10 2382837 35.0 43.5 39.2 0.2 2382837 chr3L 20525230 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_10_21715001 chr3L_21715001 RAL-913 2961 chr3L 20548326 20548383 chr3L 20548465 20548522 9 139 11.5 13.0 12.2 0.7 196 chr3L 20548326 intergenic not near genes chr3L 20548424 intergenic not near genes chr3L 20548522 intergenic not near genes chr3L_9_20545001 chr3L_20545001 RAL-913 2962 chr3L 20579984 20580057 chr3L 20580120 20580193 5 136 13.0 17.0 15.0 0.3 209 chr3L 20579984 intergenic not near genes chr3L 20580088 intergenic not near genes chr3L 20580193 intergenic not near genes chr3L_5_20580001 chr3L_20580001 RAL-913 2963 chr3L 20590017 20590058 chr3L 20590606 20590627 412 12 583 12.0 6.0 9.0 1.2 610 chr3L 20590017 intergenic not near genes chr3L 20590322 intergenic not near genes chr3L 20590627 intergenic not near genes chr3L_12_20590001 chr3L_20590001 RAL-913 2964 chr3L 20590059 20590088 chr3L 20590603 20590669 412 14 574 7.5 5.5 6.5 1.9 610 chr3L 20590059 intergenic not near genes chr3L 20590364 intergenic not near genes chr3L 20590669 intergenic not near genes chr3L_14_20590001 chr3L_20590001 RAL-913 2965 chr3L 20699876 20699931 chr3L 20699987 20700036 16 123 13.0 15.0 14.0 1.1 160 chr3L 20699876 intergenic not near genes chr3L 20699956 intergenic not near genes chr3L 20700036 intergenic not near genes chr3L_16_20695001 chr3L_20695001 RAL-913 2966 chr3L 20710718 20710785 chr3L 20710845 20710912 21 127 18.5 17.5 18.0 1.1 194 chr3L 20710718 intergenic not near genes chr3L 20710815 intergenic not near genes chr3L 20710912 intergenic not near genes chr3L_21_20710001 chr3L_20710001 RAL-913 2967 chr3L 20739453 20739504 chr3L 20739618 20739669 9 165 29.0 25.5 27.2 0.3 216 chr3L 20739453 intron CG13252 + chr3L 20739561 intron CG13252 + chr3L 20739669 intron CG13252 + chr3L_9_20735001 chr3L_20735001 RAL-913 2968 chr3L 20762788 20762809 chr3L 20762925 20762946 5 137 30.5 36.5 33.5 0.1 158 chr3L 20762788 intergenic not near genes chr3L 20762867 intergenic not near genes chr3L 20762946 intergenic not near genes chr3L_5_20760001 chr3L_20760001 RAL-913 2969 chr3L 20821234 20821305 chr3L 20824895 20824966 NOF 9 3660 27.0 23.5 25.2 0.3 3732 chr3L 20821234 intron Pka-R1 + chr3L 20823100 intron Pka-R1 + chr3L 20824966 intron Pka-R1 + chr3L_9_20820001 chr3L_20820001 RAL-913 2970 chr3L 20849223 20849286 chr3L 20849352 20849415 19 129 10.0 9.5 9.8 1.8 192 chr3L 20849223 intron CG32432 - chr3L 20849319 intron CG32432 - chr3L 20849415 intron CG32432 - chr3L_19_20845001 chr3L_20845001 RAL-913 2971 chr3L 20913726 20913732 chr3L 20913840 20913864 4 123 26.5 17.5 22.0 0.2 138 chr3L 20913726 intergenic CR43930 - chr3L 20913795 intergenic CR43930 - chr3L 20913864 intergenic CR43930 - chr3L_4_20910001 chr3L_20910001 RAL-913 2972 chr3L 20913734 20913768 chr3L 20913838 20913900 10 122 21.5 17.0 19.2 0.5 166 chr3L 20913734 intergenic CR43930 - chr3L 20913817 intergenic CR43930 - chr3L 20913900 intergenic CR43930 - chr3L_10_20910001 chr3L_20910001 RAL-913 2973 chr3L 20931770 20931825 chr3L 20931907 20931962 14 137 6.0 4.0 5.0 2.3 192 chr3L 20931770 intron fng - chr3L 20931866 intron fng - chr3L 20931962 intron fng - chr3L_14_20930001 chr3L_20930001 RAL-913 2974 chr3L 21014887 21014946 chr3L 21023398 21023464 Tirant 27 8512 4.5 8.5 6.5 3.6 8577 chr3L 21014887 intron skd - chr3L 21019176 intron skd - chr3L 21023464 intron skd - chr3L_27_21015001 chr3L_21015001 RAL-913 2975 chr3L 21052588 21052632 chr3L 21052726 21052770 10 138 17.5 24.5 21.0 0.5 182 chr3L 21052588 intron siz + chr3L 21052679 intron siz + chr3L 21052770 intron siz + chr3L_10_21050001 chr3L_21050001 RAL-913 2976 chr3L 21082162 21082230 chr3L 21082290 21082342 16 127 23.0 20.5 21.8 0.7 180 chr3L 21082162 intron ko - chr3L 21082252 intron ko - chr3L 21082342 intron ko - chr3L_16_21080001 chr3L_21080001 RAL-913 2977 chr3L 21130527 21130591 chr3L 21130771 21130835 25 244 19.0 23.0 21.0 1.1 308 chr3L 21130527 intron ko - chr3L 21130681 intron ko - chr3L 21130835 5` UTR ko - chr3L_25_21130001 chr3L_21130001 RAL-913 2978 chr3L 21145275 21145285 chr3L 21145405 21145415 7 130 21.0 10.5 15.8 0.4 140 chr3L 21145275 intron Ac78C - chr3L 21145345 intron Ac78C - chr3L 21145415 intron Ac78C - chr3L_7_21145001 chr3L_21145001 RAL-913 2979 chr3L 21151824 21151882 chr3L 21156958 21157016 flea 28 5134 11.5 10.5 11.0 2.3 5192 chr3L 21151824 intron Ac78C - chr3L 21154420 intron Ac78C - chr3L 21157016 intron Ac78C - chr3L_28_21150001 chr3L_21150001 RAL-913 2980 chr3L 21163185 21163246 chr3L 21163317 21163379 20 131 9.0 10.5 9.8 1.9 194 chr3L 21163185 intron Ac78C - chr3L 21163282 intron Ac78C - chr3L 21163379 intron Ac78C - chr3L_20_21160001 chr3L_21160001 RAL-913 2981 chr3L 21203963 21204041 chr3L 21204096 21204174 11 133 21.0 21.0 21.0 0.5 211 chr3L 21203963 intron CG10512 + chr3L 21204068 intron CG10512 + chr3L 21204174 intron CG10512 + chr3L_11_21200001 chr3L_21200001 RAL-913 2982 chr3L 21243727 21243759 chr3L 21251310 21251327 412 8 7580 11.0 10.0 10.5 0.7 7600 chr3L 21243727 intron Eip78C + chr3L 21247527 intron Eip78C + chr3L 21251327 intron Eip78C + chr3L_8_21245001 chr3L_21245001 RAL-913 2983 chr3L 21301687 21301759 chr3L 21301823 21301894 24 134 15.0 20.0 17.5 1.3 207 chr3L 21301687 5` UTR CR45432 + chr3L 21301790 5` UTR,3` UTR CR45432 +,CG11309 - chr3L 21301894 5` UTR,3` UTR CR45432 +,CG11309 - chr3L_24_21300001 chr3L_21300001 RAL-913 2984 chr3L 21306103 21306173 chr3L 21315312 21315382 roo 36 9209 10.0 12.5 11.2 3.0 9279 chr3L 21306103 3` UTR CG7632 + chr3L 21310742 intron Pc - chr3L 21315382 3` UTR Pc - chr3L_36_21310001 chr3L_21310001 RAL-913 2985 chr3L 21319485 21319557 chr3L 21319625 21319672 33 138 6.0 5.5 5.8 4.9 187 chr3L 21319485 5` UTR Rab26 + chr3L 21319578 5` UTR Rab26 + chr3L 21319672 5` UTR Rab26 + chr3L_33_21315001 chr3L_21315001 RAL-913 2986 chr3L 21348292 21348363 chr3L 21348505 21348564 15 211 25.5 26.5 26.0 0.6 272 chr3L 21348292 intron,intron CG32436 +,ebd2 - chr3L 21348428 intron,intron CG32436 +,ebd2 - chr3L 21348564 intron,intron CG32436 +,ebd2 - chr3L_15_21345001 chr3L_21345001 RAL-913 2987 chr3L 21361681 21361699 chr3L 21362685 21362703 G2 4 1003 37.0 15.5 26.2 0.1 1022 chr3L 21361681 intergenic CG32440 + chr3L 21362192 intergenic not near genes chr3L 21362703 intergenic not near genes chr3L_4_21360001 chr3L_21360001 RAL-913 2988 chr3L 21361705 21361751 chr3L 21362679 21362755 G2 11 1001 29.0 13.5 21.2 0.5 1050 chr3L 21361705 intergenic CG32440 + chr3L 21362230 intergenic not near genes chr3L 21362755 intergenic not near genes chr3L_11_21360001 chr3L_21360001 RAL-913 2989 chr3L 21362813 21362873 chr3L 21362947 21363007 22 134 38.0 31.0 34.5 0.6 194 chr3L 21362813 intergenic not near genes chr3L 21362910 intergenic not near genes chr3L 21363007 intergenic not near genes chr3L_22_21360001 chr3L_21360001 RAL-913 2990 chr3L 21372679 21372747 chr3L 21379237 21379304 McClintock 29 6558 10.5 13.5 12.0 2.2 6625 chr3L 21372679 intergenic not near genes chr3L 21375992 intergenic not near genes chr3L 21379304 intergenic not near genes chr3L_29_21375001 chr3L_21375001 RAL-913 2991 chr3L 21395103 21395167 chr3L 21395239 21395305 25 137 20.0 19.5 19.8 1.2 202 chr3L 21395103 intron rgn + chr3L 21395204 intron rgn + chr3L 21395305 intron rgn + chr3L_25_21395001 chr3L_21395001 RAL-913 2992 chr3L 21399426 21399438 chr3L 21399552 21399571 4 130 21.5 20.0 20.8 0.2 145 chr3L 21399426 intron rgn + chr3L 21399498 intron rgn + chr3L 21399571 intron rgn + chr3L_4_21395001 chr3L_21395001 RAL-913 2993 chr3L 21406955 21407020 chr3L 21407084 21407149 32 129 10.5 12.5 11.5 2.6 194 chr3L 21406955 intron rgn + chr3L 21407052 intron rgn + chr3L 21407149 intron rgn + chr3L_32_21405001 chr3L_21405001 RAL-913 2994 chr3L 21415082 21415161 chr3L 21415218 21415294 12 134 16.0 20.0 18.0 0.6 212 chr3L 21415082 intron rgn + chr3L 21415188 intron rgn + chr3L 21415294 intron rgn + chr3L_12_21415001 chr3L_21415001 RAL-913 2995 chr3L 21415847 21415855 chr3L 21415994 21416001 4 147 24.5 15.5 20.0 0.2 154 chr3L 21415847 intron rgn + chr3L 21415924 intron rgn + chr3L 21416001 intron rgn + chr3L_4_21415001 chr3L_21415001 RAL-913 2996 chr3L 21415856 21415906 chr3L 21415991 21416053 19 145 17.0 15.0 16.0 1.1 197 chr3L 21415856 intron rgn + chr3L 21415954 intron rgn + chr3L 21416053 intron rgn + chr3L_19_21415001 chr3L_21415001 RAL-913 2997 chr3L 21459643 21459691 chr3L 21459983 21460029 9 340 22.0 29.0 25.5 0.3 386 chr3L 21459643 intergenic not near genes chr3L 21459836 intergenic not near genes chr3L 21460029 intergenic not near genes chr3L_9_21455001 chr3L_21455001 RAL-913 2998 chr3L 21498832 21498869 chr3L 21500488 21500506 1360 13 1678 3.5 8.0 5.8 1.9 1674 chr3L 21498832 intron Glg1 - chr3L 21499669 intron Glg1 - chr3L 21500506 intron Glg1 - chr3L_13_21495001 chr3L_21495001 RAL-913 2999 chr3L 21587024 21587091 chr3L 21587258 21587325 13 233 22.5 28.0 25.2 0.5 301 chr3L 21587024 intron TfAP-2 + chr3L 21587174 intron TfAP-2 + chr3L 21587325 intron TfAP-2 + chr3L_13_21585001 chr3L_21585001 RAL-913 3000 chr3L 21649726 21649801 chr3L 21650000 21650075 18 274 23.5 28.0 25.8 0.7 349 chr3L 21649726 intron CG43980 + chr3L 21649900 intron CG43980 + chr3L 21650075 intron CG43980 + chr3L_18_21645001 chr3L_21645001 RAL-913 3001 chr3L 21653473 21653532 chr3L 21653602 21653651 21 127 23.5 20.5 22.0 0.9 178 chr3L 21653473 intron CG43980 + chr3L 21653562 intron CG43980 + chr3L 21653651 intron CG43980 + chr3L_21_21650001 chr3L_21650001 RAL-913 3002 chr3L 21749278 21749304 chr3L 21754487 21754502 Doc 8 5206 19.5 9.5 14.5 0.5 5224 chr3L 21749278 intron Syn1 - chr3L 21751890 intron Syn1 - chr3L 21754502 intron Syn1 - chr3L_8_21750001 chr3L_21750001 RAL-913 3003 chr3L 21749306 21749340 chr3L 21754480 21754525 Doc 10 5191 11.0 9.0 10.0 0.9 5219 chr3L 21749306 intron Syn1 - chr3L 21751916 intron Syn1 - chr3L 21754525 intron Syn1 - chr3L_10_21750001 chr3L_21750001 RAL-913 3004 chr3L 21769011 21769053 chr3L 21769148 21769190 7 137 33.5 40.5 37.0 0.2 179 chr3L 21769011 intron,intron Syn1 -,CG42689 + chr3L 21769100 intron,intron Syn1 -,CG42689 + chr3L 21769190 intron,intron Syn1 -,CG42689 + chr3L_7_21765001 chr3L_21765001 RAL-913 3005 chr3L 21769990 21770039 chr3L 21770127 21770176 10 130 10.0 12.0 11.0 0.8 186 chr3L 21769990 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770083 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770176 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L_10_21770001 chr3L_21770001 RAL-913 3006 chr3L 21771064 21771132 chr3L 21771491 21771559 4 427 12.5 22.0 17.2 0.2 495 chr3L 21771064 intron,3` UTR CG42689 +,CG7370 + chr3L 21771312 intron,3` UTR CG42689 +,CG7370 + chr3L 21771559 intron CG42689 + chr3L_4_21770001 chr3L_21770001 RAL-913 3007 chr3L 21776633 21776695 chr3L 21776766 21776832 13 135 4.5 4.0 4.2 2.5 199 chr3L 21776633 intron,intron CG42689 +,CG42552 + chr3L 21776732 intron,intron CG42689 +,CG42552 + chr3L 21776832 exon,intron CG42689 +,CG42552 + chr3L_13_21775001 chr3L_21775001 RAL-913 3008 chr3L 21798736 21798787 chr3L 21798875 21798926 13 139 18.0 20.5 19.2 0.6 190 chr3L 21798736 intergenic not near genes chr3L 21798831 intergenic not near genes chr3L 21798926 intergenic not near genes chr3L_13_21795001 chr3L_21795001 RAL-913 3009 chr3L 21809934 21809959 chr3L 21810072 21810097 7 135 20.5 24.0 22.2 0.3 163 chr3L 21809934 intron eg + chr3L 21810016 intron eg + chr3L 21810097 intron eg + chr3L_7_21810001 chr3L_21810001 RAL-913 3010 chr3L 21836690 21836754 chr3L 21836819 21836890 29 135 8.0 9.0 8.5 3.1 200 chr3L 21836690 3` UTR P5CDh1 - chr3L 21836790 3` UTR P5CDh1 - chr3L 21836890 3` UTR P5CDh1 - chr3L_29_21835001 chr3L_21835001 RAL-913 3011 chr3L 21868301 21868378 chr3L 21868675 21868752 INE-1 17 372 22.0 21.5 21.8 0.7 451 chr3L 21868301 intron mub + chr3L 21868526 intron mub + chr3L 21868752 intron mub + chr3L_17_21865001 chr3L_21865001 RAL-913 3012 chr3L 21872393 21872444 chr3L 21872522 21872573 8 129 24.0 26.5 25.2 0.3 180 chr3L 21872393 intron mub + chr3L 21872483 intron mub + chr3L 21872573 intron mub + chr3L_8_21870001 chr3L_21870001 RAL-913 3013 chr3L 21883774 21883841 chr3L 21883904 21883949 15 127 24.0 21.5 22.8 0.6 175 chr3L 21883774 intron mub + chr3L 21883862 intron mub + chr3L 21883949 intron mub + chr3L_15_21880001 chr3L_21880001 RAL-913 3014 chr3L 21905296 21905354 chr3L 21905426 21905484 14 126 21.0 24.0 22.5 0.6 188 chr3L 21905296 intron mub + chr3L 21905390 intron mub + chr3L 21905484 intron mub + chr3L_14_21905001 chr3L_21905001 RAL-913 3015 chr3L 21912438 21912464 chr3L 21912982 21913023 6 556 20.5 13.5 17.0 0.3 585 chr3L 21912438 intron mub + chr3L 21912730 intron mub + chr3L 21913023 intron mub + chr3L_6_21910001 chr3L_21910001 RAL-913 3016 chr3L 21918649 21918716 chr3L 21918873 21918941 20 224 23.0 16.0 19.5 1.0 292 chr3L 21918649 intron mub + chr3L 21918795 intron mub + chr3L 21918941 intron mub + chr3L_20_21915001 chr3L_21915001 RAL-913 3017 chr3L 21975637 21975705 chr3L 21975921 21975989 16 282 21.0 27.0 24.0 0.6 352 chr3L 21975637 intron CG7470 + chr3L 21975813 intron CG7470 + chr3L 21975989 intron CG7470 + chr3L_16_21975001 chr3L_21975001 RAL-913 3018 chr3L 21994413 21994452 chr3L 21994539 21994583 16 131 24.5 31.5 28.0 0.6 170 chr3L 21994413 intergenic not near genes chr3L 21994498 intergenic not near genes chr3L 21994583 intergenic not near genes chr3L_16_21990001 chr3L_21990001 RAL-913 3019 chr3L 22034561 22034636 chr3L 22034713 22034788 21 152 7.5 9.0 8.2 2.3 227 chr3L 22034561 intergenic Oct-TyrR + chr3L 22034674 intergenic Oct-TyrR + chr3L 22034788 intergenic Oct-TyrR + chr3L_21_22030001 chr3L_22030001 RAL-913 3020 chr3L 22099632 22099697 chr3L 22105868 22105933 3S18 37 6236 12.0 11.5 11.8 2.9 6301 chr3L 22099632 intergenic not near genes chr3L 22102782 intergenic not near genes chr3L 22105933 intergenic not near genes chr3L_37_22100001 chr3L_22100001 RAL-913 3021 chr3L 22122121 22122138 chr3L 22122515 22122532 11 394 16.5 6.0 11.2 0.9 411 chr3L 22122121 5` UTR CR45236 + chr3L 22122326 intergenic CR45236 +,CR45235 + chr3L 22122532 intergenic CR45235 +,CR45236 + chr3L_11_22120001 chr3L_22120001 RAL-913 3022 chr3L 22122139 22122191 chr3L 22122513 22122585 21 391 6.0 5.5 5.8 3.1 446 chr3L 22122139 5` UTR CR45236 + chr3L 22122362 intergenic CR45236 +,CR45235 + chr3L 22122585 intergenic CR45235 +,CR45236 + chr3L_21_22120001 chr3L_22120001 RAL-913 3023 chr3L 22130449 22130523 chr3L 22130645 22130719 28 196 4.5 7.5 6.0 4.0 270 chr3L 22130449 intergenic not near genes chr3L 22130584 intergenic not near genes chr3L 22130719 intergenic not near genes chr3L_28_22130001 chr3L_22130001 RAL-913 3024 chr3L 22137480 22137551 chr3L 22137607 22137678 23 127 9.0 10.0 9.5 2.2 198 chr3L 22137480 intron olf413 + chr3L 22137579 intron olf413 + chr3L 22137678 intron olf413 + chr3L_23_22135001 chr3L_22135001 RAL-913 3025 chr3L 22194279 22194319 chr3L 22194406 22194440 15 125 13.5 13.0 13.2 1.1 161 chr3L 22194279 intron olf413 + chr3L 22194360 intron olf413 + chr3L 22194440 intron olf413 + chr3L_15_22190001 chr3L_22190001 RAL-913 3026 chr3L 22241274 22241321 chr3L 22241376 22241446 12 121 8.5 8.0 8.2 1.3 172 chr3L 22241274 intron olf413 + chr3L 22241360 intron olf413 + chr3L 22241446 intron olf413 + chr3L_12_22240001 chr3L_22240001 RAL-913 3027 chr3L 22250959 22251017 chr3L 22251089 22251162 26 137 13.0 5.0 9.0 2.6 203 chr3L 22250959 intergenic not near genes chr3L 22251060 intergenic not near genes chr3L 22251162 intergenic not near genes chr3L_26_22250001 chr3L_22250001 RAL-913 3028 chr3L 22328010 22328088 chr3L 22328158 22328189 10 135 17.5 17.0 17.2 0.5 179 chr3L 22328010 intron Ten-m - chr3L 22328100 intron Ten-m - chr3L 22328189 intron Ten-m - chr3L_10_22325001 chr3L_22325001 RAL-913 3029 chr3L 22333392 22333444 chr3L 22333580 22333632 10 181 30.5 25.0 27.8 0.3 240 chr3L 22333392 intron Ten-m - chr3L 22333512 intron Ten-m - chr3L 22333632 intron Ten-m - chr3L_10_22330001 chr3L_22330001 RAL-913 3030 chr3L 22361894 22361920 chr3L 22362021 22362047 11 127 18.0 6.0 12.0 0.8 153 chr3L 22361894 intron Ten-m - chr3L 22361970 intron Ten-m - chr3L 22362047 intron Ten-m - chr3L_11_22360001 chr3L_22360001 RAL-913 3031 chr3L 22361922 22361971 chr3L 22362016 22362098 13 122 9.0 9.5 9.2 1.3 176 chr3L 22361922 intron Ten-m - chr3L 22362010 intron Ten-m - chr3L 22362098 intron Ten-m - chr3L_13_22360001 chr3L_22360001 RAL-913 3032 chr3L 22369274 22369337 chr3L 22369435 22369497 15 157 14.0 14.0 14.0 1.0 223 chr3L 22369274 intron Ten-m - chr3L 22369386 intron Ten-m - chr3L 22369497 intron Ten-m - chr3L_15_22365001 chr3L_22365001 RAL-913 3033 chr3L 22382110 22382159 chr3L 22382238 22382295 8 135 21.5 23.5 22.5 0.3 185 chr3L 22382110 intron Ten-m - chr3L 22382202 intron Ten-m - chr3L 22382295 intron Ten-m - chr3L_8_22380001 chr3L_22380001 RAL-913 3034 chr3L 22411328 22411341 chr3L 22411452 22411468 5 125 14.0 5.0 9.5 0.5 140 chr3L 22411328 intergenic not near genes chr3L 22411398 intergenic not near genes chr3L 22411468 intergenic not near genes chr3L_5_22410001 chr3L_22410001 RAL-913 3035 chr3L 22411344 22411398 chr3L 22411450 22411510 18 115 8.5 5.0 6.8 2.3 166 chr3L 22411344 intergenic not near genes chr3L 22411427 intergenic not near genes chr3L 22411510 intergenic not near genes chr3L_18_22410001 chr3L_22410001 RAL-913 3036 chr3L 22413841 22413900 chr3L 22413972 22414034 8 130 23.0 22.0 22.5 0.3 193 chr3L 22413841 intergenic not near genes chr3L 22413938 intergenic not near genes chr3L 22414034 intergenic not near genes chr3L_8_22410001 chr3L_22410001 RAL-913 3037 chr3L 22447157 22447222 chr3L 22447298 22447363 13 141 17.0 22.5 19.8 0.6 206 chr3L 22447157 intergenic not near genes chr3L 22447260 intergenic not near genes chr3L 22447363 intergenic not near genes chr3L_13_22445001 chr3L_22445001 RAL-913 3038 chr3L 22507096 22507155 chr3L 22507217 22507257 13 127 22.5 21.5 22.0 0.6 161 chr3L 22507096 intergenic not near genes chr3L 22507176 intergenic not near genes chr3L 22507257 intergenic not near genes chr3L_13_22505001 chr3L_22505001 RAL-913 3039 chr3L 22522651 22522717 chr3L 22522778 22522844 8 127 32.5 31.0 31.8 0.2 193 chr3L 22522651 intergenic not near genes chr3L 22522748 intergenic not near genes chr3L 22522844 intergenic not near genes chr3L_8_22520001 chr3L_22520001 RAL-913 3040 chr3L 22543038 22543097 chr3L 22543165 22543224 23 127 23.0 23.5 23.2 1.0 186 chr3L 22543038 intergenic not near genes chr3L 22543131 intergenic not near genes chr3L 22543224 intergenic not near genes chr3L_23_22540001 chr3L_22540001 RAL-913 3041 chr3L 22547239 22547266 chr3L 22547365 22547372 4 121 30.5 31.0 30.8 0.1 133 chr3L 22547239 intergenic not near genes chr3L 22547306 intergenic not near genes chr3L 22547372 intergenic not near genes chr3L_4_22545001 chr3L_22545001 RAL-913 3042 chr3L 22555722 22555798 chr3L 22563242 22563288 blood 21 7515 8.5 3.5 6.0 3.0 7566 chr3L 22555722 intergenic not near genes chr3L 22559505 intergenic not near genes chr3L 22563288 intergenic not near genes chr3L_21_22555001 chr3L_22555001 RAL-913 3043 chr3L 22563668 22563729 chr3L 22563806 22563865 5 129 18.0 19.0 18.5 0.3 197 chr3L 22563668 intergenic not near genes chr3L 22563766 intergenic not near genes chr3L 22563865 intergenic not near genes chr3L_5_22560001 chr3L_22560001 RAL-913 3044 chr3L 22577580 22577645 chr3L 22582418 22582450 Doc 19 4830 3.5 9.5 6.5 2.5 4870 chr3L 22577580 intergenic not near genes chr3L 22580015 intergenic not near genes chr3L 22582450 3` UTR CG14459 - chr3L_19_22580001 chr3L_22580001 RAL-913 3045 chr3L 22617157 22617210 chr3L 22624654 22624712 blood 23 7502 10.0 9.5 9.8 2.1 7555 chr3L 22617157 intron CG14459 - chr3L 22620934 intron CG14459 - chr3L 22624712 intron CG14459 - chr3L_23_22620001 chr3L_22620001 RAL-913 3046 chr3L 22678048 22678099 chr3L 22678171 22678242 11 136 26.5 22.5 24.5 0.4 194 chr3L 22678048 intron CG14457 + chr3L 22678145 intron CG14457 + chr3L 22678242 intron CG14457 + chr3L_11_22675001 chr3L_22675001 RAL-913 3047 chr3L 22731841 22731874 chr3L 22731970 22732004 11 130 23.5 23.0 23.2 0.5 163 chr3L 22731841 intron CG11367 + chr3L 22731922 intron CG11367 + chr3L 22732004 intron CG11367 + chr3L_11_22730001 chr3L_22730001 RAL-913 3048 chr3L 22747630 22747645 chr3L 22747735 22747769 4 120 34.5 27.0 30.8 0.1 139 chr3L 22747630 exon CG7369 + chr3L 22747700 exon CG7369 + chr3L 22747769 3` UTR CG7369 + chr3L_4_22745001 chr3L_22745001 RAL-913 3049 chr3L 22761348 22761403 chr3L 22766832 22766887 Ivk 17 5482 13.0 12.5 12.8 1.2 5539 chr3L 22761348 intron SPoCk + chr3L 22764118 intron SPoCk + chr3L 22766887 intron SPoCk + chr3L_17_22760001 chr3L_22760001 RAL-913 3050 chr3L 22853418 22853714 chr3L 22853555 22853850 46 135 10.0 28.5 19.2 2.3 432 chr3L 22853418 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853634 5` UTR CR43426 + chr3L 22853850 5` UTR CR43426 + chr3L_46_22850001 chr3L_22850001 RAL-913 3051 chr3L 22865940 22865970 chr3L 22867123 22867153 Doc 28 1183 12.0 10.5 11.2 2.3 1213 chr3L 22865940 exon CG33170 + chr3L 22866546 intron CG33170 + chr3L 22867153 intron CG33170 + chr3L_28_22865001 chr3L_22865001 RAL-913 3052 chr3L 22865971 22866003 chr3L 22867114 22867186 Doc 20 1181 8.0 9.0 8.5 2.1 1215 chr3L 22865971 intron CG33170 + chr3L 22866578 intron CG33170 + chr3L 22867186 intron CG33170 + chr3L_20_22865001 chr3L_22865001 RAL-913 3053 chr3L 22897175 22897220 chr3L 22897283 22897353 17 129 0.5 8.0 4.2 3.3 178 chr3L 22897175 intergenic not near genes chr3L 22897264 intergenic not near genes chr3L 22897353 intergenic not near genes chr3L_17_22895001 chr3L_22895001 RAL-913 3054 chr3L 9307795 9307796 chr3L 22908066 22908066 5 13600270 39.0 43.5 41.2 0.1 13600271 chr3L 9307795 intergenic not near genes chr3L 16107930 intron Zn72D - chr3L 22908066 intergenic not near genes chr3L_5_16105001 chr3L_16105001 RAL-913 3055 chr3L 19220633 19220637 chr3L 22908066 22908066 19 3687431 39.5 43.5 41.5 0.4 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_19_21060001 chr3L_21060001 RAL-913 3056 chr3L 20525228 20525230 chr3L 22908066 22908066 34 2382837 35.0 43.5 39.2 0.8 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_34_21715001 chr3L_21715001 RAL-913 3057 chr3L 19220633 19220636 chr3L 22908067 22908067 8 3687433 39.0 43.0 41.0 0.2 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_8_21060001 chr3L_21060001 RAL-913 3058 chr3L 20525228 20525230 chr3L 22908067 22908067 7 2382837 35.0 43.0 39.0 0.2 2382839 chr3L 20525228 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_7_21715001 chr3L_21715001 RAL-913 3059 chr3L 22915134 22915165 chr3L 22915291 22915322 8 157 29.5 29.5 29.5 0.3 188 chr3L 22915134 intron CG12768 + chr3L 22915228 intron CG12768 + chr3L 22915322 intron CG12768 + chr3L_8_22915001 chr3L_22915001 RAL-913 3060 chr3L 22924898 22924975 chr3L 22925024 22925085 12 125 21.0 22.0 21.5 0.5 187 chr3L 22924898 intergenic not near genes chr3L 22924992 intergenic not near genes chr3L 22925085 intergenic not near genes chr3L_12_22920001 chr3L_22920001 RAL-913 3061 chr3L 22931451 22931513 chr3L 22931593 22931655 9 142 35.5 30.0 32.8 0.3 204 chr3L 22931451 intergenic not near genes chr3L 22931553 intergenic not near genes chr3L 22931655 intergenic not near genes chr3L_9_22930001 chr3L_22930001 RAL-913 3062 chr3L 22949150 22949221 chr3L 22949288 22949359 18 138 24.0 22.0 23.0 0.8 209 chr3L 22949150 intron Mes2 + chr3L 22949254 intron Mes2 + chr3L 22949359 intron Mes2 + chr3L_18_22945001 chr3L_22945001 RAL-913 3063 chr3L 22955349 22955407 chr3L 22956686 22956750 INE-1 8 1342 29.5 23.5 26.5 0.3 1401 chr3L 22955349 intergenic CG32461 - chr3L 22956050 intergenic not near genes chr3L 22956750 intergenic not near genes chr3L_8_22955001 chr3L_22955001 RAL-913 3064 chr3L 22974327 22974386 chr3L 22974450 22974512 17 126 26.5 26.0 26.2 0.6 185 chr3L 22974327 intergenic not near genes chr3L 22974420 intergenic not near genes chr3L 22974512 intergenic not near genes chr3L_17_22970001 chr3L_22970001 RAL-913 3065 chr3L 22984940 22984998 chr3L 22985358 22985416 13 418 28.5 30.0 29.2 0.4 476 chr3L 22984940 intergenic not near genes chr3L 22985178 intergenic not near genes chr3L 22985416 intergenic not near genes chr3L_13_22985001 chr3L_22985001 RAL-913 3066 chr3L 22989829 22989894 chr3L 22996853 22996902 297 24 7023 6.0 12.0 9.0 2.4 7073 chr3L 22989829 intergenic not near genes chr3L 22993366 intergenic not near genes chr3L 22996902 intergenic not near genes chr3L_24_22990001 chr3L_22990001 RAL-913 3067 chr3L 23004880 23004940 chr3L 23005244 23005250 10 362 22.5 27.0 24.8 0.4 370 chr3L 23004880 intron nrm + chr3L 23005065 intron nrm + chr3L 23005250 intron nrm + chr3L_10_23005001 chr3L_23005001 RAL-913 3068 chr3L 23011103 23011171 chr3L 23011230 23011298 18 127 18.5 22.5 20.5 0.8 195 chr3L 23011103 intron nrm + chr3L 23011200 intron nrm + chr3L 23011298 intron nrm + chr3L_18_23010001 chr3L_23010001 RAL-913 3069 chr3L 23012187 23012201 chr3L 23012423 23012437 6 236 27.0 24.5 25.8 0.2 250 chr3L 23012187 intron nrm + chr3L 23012312 intron nrm + chr3L 23012437 intron nrm + chr3L_6_23010001 chr3L_23010001 RAL-913 3070 chr3L 23042183 23042249 chr3L 23048986 23049046 gypsy6 18 6798 18.0 30.5 24.2 0.7 6863 chr3L 23042183 intergenic not near genes chr3L 23045614 intergenic not near genes chr3L 23049046 intergenic not near genes chr3L_18_23045001 chr3L_23045001 RAL-913 3071 chr3L 23165875 23165896 chr3L 23173369 23173390 Quasimodo 9 7494 9.5 7.0 8.2 1.0 7515 chr3L 23165875 intergenic not near genes chr3L 23169632 intergenic not near genes chr3L 23173390 intergenic not near genes chr3L_9_23165001 chr3L_23165001 RAL-913 3072 chr3L 23215143 23215205 chr3L 23215283 23215359 11 147 19.0 20.5 19.8 0.5 216 chr3L 23215143 intron nAChRalpha4 + chr3L 23215251 intron nAChRalpha4 + chr3L 23215359 intron nAChRalpha4 + chr3L_11_23215001 chr3L_23215001 RAL-913 3073 chr3L 23255264 23255336 chr3L 23255390 23255462 16 121 23.0 24.5 23.8 0.6 198 chr3L 23255264 intron nAChRalpha4 + chr3L 23255363 intron nAChRalpha4 + chr3L 23255462 intron nAChRalpha4 + chr3L_16_23255001 chr3L_23255001 RAL-913 3074 chr3L 23288924 23288983 chr3L 23289060 23289105 11 133 41.0 52.5 46.8 0.2 181 chr3L 23288924 intergenic not near genes chr3L 23289014 intergenic not near genes chr3L 23289105 intergenic not near genes chr3L_11_23285001 chr3L_23285001 RAL-913 3075 chr3L 23290449 23290500 chr3L 23295332 23295383 X-element 24 4883 55.5 20.5 38.0 0.6 4934 chr3L 23290449 intergenic not near genes chr3L 23292916 intergenic not near genes chr3L 23295383 intergenic not near genes chr3L_24_23290001 chr3L_23290001 RAL-913 3076 chr3L 23323435 23323511 chr3L 23324924 23325000 13 1488 28.5 31.0 29.8 0.4 1565 chr3L 23323435 intron alpha-Cat - chr3L 23324218 intron alpha-Cat - chr3L 23325000 intron alpha-Cat - chr3L_13_23320001 chr3L_23320001 RAL-913 3077 chr3L 23325204 23325269 chr3L 23325374 23325439 29 169 36.5 31.0 33.8 0.8 235 chr3L 23325204 intron alpha-Cat - chr3L 23325322 intron alpha-Cat - chr3L 23325439 intron alpha-Cat - chr3L_29_23325001 chr3L_23325001 RAL-913 3078 chr3L 23341678 23341716 chr3L 23342489 23342534 6 817 28.0 34.0 31.0 0.2 856 chr3L 23341678 intron CG32230 + chr3L 23342106 intron CG32230 + chr3L 23342534 intron CG32230 + chr3L_6_23340001 chr3L_23340001 RAL-913 3079 chr3L 23665492 23665517 chr3L 23665632 23665657 gypsy8 9 139 38.5 34.0 36.2 0.2 165 chr3L 23665492 intron AGO3 + chr3L 23665574 intron AGO3 + chr3L 23665657 intron AGO3 + chr3L_9_23665001 chr3L_23665001 RAL-913 3080 chr3L 23823981 23824014 chr3L 23824443 23824477 7 463 23.5 16.5 20.0 0.3 496 chr3L 23823981 intergenic not near genes chr3L 23824229 intergenic not near genes chr3L 23824477 intergenic not near genes chr3L_7_23820001 chr3L_23820001 RAL-913 3081 chr3L 23848796 23848838 chr3L 23849669 23849712 R1A1-element 5 873 17.0 19.0 18.0 0.3 916 chr3L 23848796 intron CG40470 - chr3L 23849254 intron CG40470 - chr3L 23849712 intron CG40470 - chr3L_5_23845001 chr3L_23845001 RAL-913 3082 chr3L 23854255 23854312 chr3L 23854396 23854405 8 140 16.0 10.5 13.2 0.6 150 chr3L 23854255 intron CG40470 - chr3L 23854330 intron CG40470 - chr3L 23854405 intron CG40470 - chr3L_8_23850001 chr3L_23850001 RAL-913 3083 chr3L 23866736 23866747 chr3L 23868043 23868054 flea 4 1307 0.0 21.5 10.8 0.3 1318 chr3L 23866736 intron CG40470 - chr3L 23867395 intron CG40470 - chr3L 23868054 intron CG40470 - chr3L_4_23865001 chr3L_23865001 RAL-913 3084 chr3L 23875488 23875545 chr3L 23875619 23875676 14 131 15.0 18.0 16.5 0.8 188 chr3L 23875488 intron CG40470 - chr3L 23875582 intron CG40470 - chr3L 23875676 intron CG40470 - chr3L_14_23875001 chr3L_23875001 RAL-913 3085 chr3L 23941739 23941755 chr3L 23948097 23948113 Transpac 5 6358 20.5 29.5 25.0 0.2 6374 chr3L 23941739 intron CG40470 - chr3L 23944926 intron CG40470 - chr3L 23948113 intron CG40470 - chr3L_5_23940001 chr3L_23940001 RAL-913 3086 chr3L 24009620 24009672 chr3L 24009852 24009904 12 232 28.5 31.0 29.8 0.4 284 chr3L 24009620 intergenic CR40053 - chr3L 24009762 intergenic CR40053 - chr3L 24009904 intergenic CR40053 - chr3L_12_24005001 chr3L_24005001 RAL-913 3087 chr3L 24012366 24012403 chr3L 24020757 24020794 roo 18 8390 14.5 13.0 13.8 1.2 8428 chr3L 24012366 intergenic not near genes chr3L 24016580 intergenic not near genes chr3L 24020794 intergenic not near genes chr3L_18_24015001 chr3L_24015001 RAL-913 3088 chr3L 24012405 24012428 chr3L 24020754 24020819 roo 13 8386 8.0 12.5 10.2 1.2 8414 chr3L 24012405 intergenic not near genes chr3L 24016612 intergenic not near genes chr3L 24020819 intergenic not near genes chr3L_13_24015001 chr3L_24015001 RAL-913 3089 chr3L 24021239 24021308 chr3L 24022446 24022476 1360 10 1201 28.0 32.0 30.0 0.3 1237 chr3L 24021239 intergenic not near genes chr3L 24021858 intergenic not near genes chr3L 24022476 intergenic not near genes chr3L_10_24020001 chr3L_24020001 RAL-913 3090 chr3L 24168594 24168618 chr3L 24176397 24176402 ZAM 4 7792 16.5 10.5 13.5 0.3 7808 chr3L 24168594 intron Snap25 + chr3L 24172498 intron Snap25 + chr3L 24176402 intron Snap25 + chr3L_4_24170001 chr3L_24170001 RAL-913 3091 chr3L 24168753 24168819 chr3L 24176124 24176148 ZAM 4 7359 2.5 1.0 1.8 1.4 7395 chr3L 24168753 intron Snap25 + chr3L 24172450 intron Snap25 + chr3L 24176148 intron Snap25 + chr3L_4_24170001 chr3L_24170001 RAL-913 3092 chr3L 24289896 24289956 chr3L 24290023 24290083 18 127 23.5 22.0 22.8 0.8 187 chr3L 24289896 intron Snap25 + chr3L 24289990 intron Snap25 + chr3L 24290083 intron Snap25 + chr3L_18_24285001 chr3L_24285001 RAL-913 3093 chr3L 24290475 24290513 chr3L 24290853 24290890 8 383 11.5 15.0 13.2 0.6 415 chr3L 24290475 intron,3` UTR Snap25 +,CR45159 - chr3L 24290682 intron,3` UTR Snap25 +,CR45159 - chr3L 24290890 intron Snap25 + chr3L_8_24290001 chr3L_24290001 RAL-913 3094 chr3L 24321748 24321811 chr3L 24322042 24322105 5 292 67.5 54.0 60.8 0.1 357 chr3L 24321748 intergenic not near genes chr3L 24321926 intergenic not near genes chr3L 24322105 intergenic not near genes chr3L_5_24320001 chr3L_24320001 RAL-913 3095 chr3L 24324272 24324318 chr3L 24324404 24324463 5 142 26.5 25.0 25.8 0.2 191 chr3L 24324272 intergenic not near genes chr3L 24324368 intergenic nvd + chr3L 24324463 intergenic nvd + chr3L_5_24320001 chr3L_24320001 RAL-913 3096 chr3L 24347084 24347126 chr3L 24347214 24347249 5 129 26.5 25.0 25.8 0.2 165 chr3L 24347084 intron nvd + chr3L 24347166 intron nvd + chr3L 24347249 intron nvd + chr3L_5_24345001 chr3L_24345001 RAL-913 3097 chr3L 24363201 24363254 chr3L 24363329 24363381 7 121 16.5 16.0 16.2 0.4 180 chr3L 24363201 intron nvd + chr3L 24363291 intron nvd + chr3L 24363381 intron nvd + chr3L_7_24360001 chr3L_24360001 RAL-913 3098 chr3L 24731742 24731749 chr3L 24731869 24731876 5 127 17.5 15.0 16.2 0.3 134 chr3L 24731742 intron scro + chr3L 24731809 intron scro + chr3L 24731876 intron scro + chr3L_5_24730001 chr3L_24730001 RAL-913 3099 chr3L 24791852 24791862 chr3L 24796681 24796691 Doc 4 4829 16.5 9.0 12.8 0.3 4839 chr3L 24791852 intergenic not near genes chr3L 24794272 intergenic not near genes chr3L 24796691 intergenic not near genes chr3L_4_24790001 chr3L_24790001 RAL-913 3100 chr3L 24791864 24791882 chr3L 24796680 24796711 Doc 11 4828 14.0 9.0 11.5 0.9 4847 chr3L 24791864 intergenic not near genes chr3L 24794288 intergenic not near genes chr3L 24796711 intergenic not near genes chr3L_11_24790001 chr3L_24790001 RAL-913 3101 chr3L 18198930 18198930 chr3L 24821492 24821492 13 6622562 1.0 31.0 16.0 0.8 6622562 chr3L 18198930 intergenic not near genes chr3L 21510211 intron M6 + chr3L 24821492 intergenic not near genes chr3L_13_21510001 chr3L_21510001 RAL-913 3102 chr3L 20525228 20525230 chr3L 24821492 24821492 5 4296263 35.0 31.0 33.0 0.1 4296264 chr3L 20525228 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821492 intergenic not near genes chr3L_5_22670001 chr3L_22670001 RAL-913 3103 chr3L 18198931 18198931 chr3L 24821493 24821493 6 6622562 1.0 30.0 15.5 0.4 6622562 chr3L 18198931 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821493 intergenic not near genes chr3L_6_21510001 chr3L_21510001 RAL-913 3104 chr3L 20525227 20525229 chr3L 24821494 24821494 4 4296266 35.5 30.0 32.8 0.1 4296267 chr3L 20525227 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_4_22670001 chr3L_22670001 RAL-913 3105 chr3L 25331586 25331650 chr3L 25331727 25331767 12 132 3.0 5.0 4.0 2.4 181 chr3L 25331586 intergenic not near genes chr3L 25331676 intergenic not near genes chr3L 25331767 intergenic not near genes chr3L_12_25330001 chr3L_25330001 RAL-913 3106 chr3L 25343588 25343650 chr3L 25346404 25346467 17 2817 19.0 25.0 22.0 0.7 2879 chr3L 25343588 intergenic not near genes chr3L 25345028 intergenic not near genes chr3L 25346467 intergenic not near genes chr3L_17_25345001 chr3L_25345001 RAL-913 3107 chr3L 25502180 25502223 chr3L 25502316 25502376 5 150 50.0 52.0 51.0 0.1 196 chr3L 25502180 intron CG41343 - chr3L 25502278 intron CG41343 - chr3L 25502376 intron CG41343 - chr3L_5_25500001 chr3L_25500001 RAL-913 3108 chr3L 25514670 25514713 chr3L 25514839 25514903 6 178 15.0 13.0 14.0 0.4 233 chr3L 25514670 intron CG41343 - chr3L 25514786 intron CG41343 - chr3L 25514903 intron CG41343 - chr3L_6_25510001 chr3L_25510001 RAL-913 3109 chr3L 25628473 25628503 chr3L 25633294 25633324 F-element 7 4821 27.5 15.5 21.5 0.3 4851 chr3L 25628473 intron CG41343 - chr3L 25630898 intron CG41343 - chr3L 25633324 intron CG41343 - chr3L_7_25630001 chr3L_25630001 RAL-913 3110 chr3L 25628504 25628510 chr3L 25633276 25633331 F-element 4 4809 25.0 13.0 19.0 0.2 4827 chr3L 25628504 intron CG41343 - chr3L 25630918 intron CG41343 - chr3L 25633331 intron CG41343 - chr3L_4_25630001 chr3L_25630001 RAL-913 3111 chr3L 25635674 25635730 chr3L 25635996 25636052 9 321 22.5 20.0 21.2 0.4 378 chr3L 25635674 intron CG41343 - chr3L 25635863 intron CG41343 - chr3L 25636052 intron CG41343 - chr3L_9_25635001 chr3L_25635001 RAL-913 3112 chr3L 23289005 23289074 chr3L 25843636 25843705 20 2554632 61.5 50.0 55.8 0.4 2554700 chr3L 23289005 intergenic not near genes chr3L 24566355 intergenic not near genes chr3L 25843705 intron CG40178 - chr3L_20_24565001 chr3L_24565001 RAL-913 3113 chr3L 25995885 25995904 chr3L 25996016 25996035 4 131 28.0 30.5 29.2 0.1 150 chr3L 25995885 intron CG40178 - chr3L 25995960 intron CG40178 - chr3L 25996035 intron CG40178 - chr3L_4_25995001 chr3L_25995001 RAL-913 3114 chr3L 26008732 26008785 chr3L 26008929 26008982 18 196 28.0 18.5 23.2 0.7 250 chr3L 26008732 intron CG40178 - chr3L 26008857 intron CG40178 - chr3L 26008982 intron CG40178 - chr3L_18_26005001 chr3L_26005001 RAL-913 3115 chr3L 26009387 26009412 chr3L 26009528 26009552 7 141 27.5 20.0 23.8 0.3 165 chr3L 26009387 intron CG40178 - chr3L 26009470 intron CG40178 - chr3L 26009552 intron CG40178 - chr3L_7_26005001 chr3L_26005001 RAL-913 3116 chr3L 26704487 26704526 chr3L 26709842 26709880 Transpac 4 5353 8.0 9.0 8.5 0.4 5393 chr3L 26704487 intergenic not near genes chr3L 26707184 intergenic not near genes chr3L 26709880 intergenic not near genes chr3L_4_26705001 chr3L_26705001 RAL-913 3117 chr3L 26717616 26717674 chr3L 26717742 26717800 16 126 17.5 15.5 16.5 0.9 184 chr3L 26717616 intergenic not near genes chr3L 26717708 intergenic not near genes chr3L 26717800 intergenic not near genes chr3L_16_26715001 chr3L_26715001 RAL-913 3118 chr3L 23941236 23941239 chr3L 26882295 26882298 1360 6 2941059 35.0 10.5 22.8 0.3 2941062 chr3L 23941236 intron CG40470 - chr3L 25411767 intergenic not near genes chr3L 26882298 intergenic not near genes chr3L_6_25410001 chr3L_25410001 RAL-913 3119 chr3L 23941235 23941245 chr3L 26882299 26882300 1360 4 2941059 34.0 9.0 21.5 0.2 2941065 chr3L 23941235 intron CG40470 - chr3L 25411768 intergenic not near genes chr3L 26882300 intergenic not near genes chr3L_4_25410001 chr3L_25410001 RAL-913 3120 chr3L 27269403 27269462 chr3L 27269536 27269595 16 131 21.5 22.0 21.8 0.7 192 chr3L 27269403 intergenic not near genes chr3L 27269499 intergenic not near genes chr3L 27269595 intergenic not near genes chr3L_16_27265001 chr3L_27265001 RAL-913 3121 chr3L 27356065 27356097 chr3L 27357314 27357346 1360 9 1248 28.5 20.5 24.5 0.4 1281 chr3L 27356065 intron Dbp80 + chr3L 27356706 intron Dbp80 + chr3L 27357346 intron Dbp80 + chr3L_9_27355001 chr3L_27355001 RAL-913 3122 chr3L 27368844 27368899 chr3L 27369439 27369495 10 596 28.5 32.0 30.2 0.3 651 chr3L 27368844 intron Dbp80 + chr3L 27369170 intron Dbp80 + chr3L 27369495 intron Dbp80 + chr3L_10_27365001 chr3L_27365001 RAL-913 3123 chr3L 27390678 27390705 chr3L 27390804 27390834 9 127 44.0 53.0 48.5 0.2 156 chr3L 27390678 intron Dbp80 + chr3L 27390756 intron Dbp80 + chr3L 27390834 intron Dbp80 + chr3L_9_27390001 chr3L_27390001 RAL-913 3124 chr3L 27392032 27392061 chr3L 27392139 27392195 6 127 44.0 47.0 45.5 0.1 163 chr3L 27392032 intron Dbp80 + chr3L 27392114 intron Dbp80 + chr3L 27392195 intron Dbp80 + chr3L_6_27390001 chr3L_27390001 RAL-913 3125 chr3L 27967531 27967601 chr3L 27971646 27971715 34 4114 54.0 48.5 51.2 0.7 4184 chr3L 27967531 exon CG17514 - chr3L 27969623 exon CG17514 - chr3L 27971715 exon CG17514 - chr3L_34_27965001 chr3L_27965001 RAL-913 3126 chr3L 27972675 27972835 chr3L 27972817 27972961 31 135 32.5 36.0 34.2 0.9 286 chr3L 27972675 exon CG17514 - chr3L 27972818 exon CG17514 - chr3L 27972961 exon CG17514 - chr3L_31_27970001 chr3L_27970001 RAL-913 3127 chr3L 27971586 27971659 chr3L 27972866 27972964 26 1293 50.5 33.5 42.0 0.6 1378 chr3L 27971586 exon CG17514 - chr3L 27972275 exon CG17514 - chr3L 27972964 exon CG17514 - chr3L_26_27970001 chr3L_27970001 RAL-913 3128 chr3L 27980646 27980700 chr3L 27985494 27985548 Doc 13 4848 29.0 11.0 20.0 0.6 4902 chr3L 27980646 intron CG17514 - chr3L 27983097 intron CG17514 - chr3L 27985548 intron CG17514 - chr3L_13_27980001 chr3L_27980001 RAL-913 3129 chr3R 1062339 1062400 chr3R 1062547 1062608 6 208 17.0 17.0 17.0 0.3 269 chr3R 1062339 intron CG15831 + chr3R 1062474 intron CG15831 + chr3R 1062608 intron CG15831 + chr3R_6_1060001 chr3R_1060001 RAL-913 3130 chr3R 1939006 1939067 chr3R 1939150 1939211 9 144 18.5 14.0 16.2 0.5 205 chr3R 1939006 intergenic not near genes chr3R 1939108 intergenic not near genes chr3R 1939211 intergenic not near genes chr3R_9_1935001 chr3R_1935001 RAL-913 3131 chr3R 2534110 2534152 chr3R 2541713 2541771 10 7611 21.0 19.0 20.0 0.5 7661 chr3R 2534110 intergenic not near genes chr3R 2537940 intergenic not near genes chr3R 2541771 intergenic not near genes chr3R_10_2535001 chr3R_2535001 RAL-913 3132 chr3R 2556884 2556953 chr3R 2557567 2557636 13 685 32.5 25.0 28.8 0.4 752 chr3R 2556884 intron CG41056 - chr3R 2557260 intron CG41056 - chr3R 2557636 intron CG41056 - chr3R_13_2555001 chr3R_2555001 RAL-913 3133 chr3R 3578332 3578390 chr3R 3578462 3578520 10 130 23.5 27.0 25.2 0.4 188 chr3R 3578332 intron Parp - chr3R 3578426 intron Parp - chr3R 3578520 intron Parp - chr3R_10_3575001 chr3R_3575001 RAL-913 3134 chr3R 3752697 3752753 chr3R 3752825 3752885 4 132 27.0 28.0 27.5 0.1 188 chr3R 3752697 intergenic CG41128 + chr3R 3752791 intergenic CG41128 + chr3R 3752885 intergenic not near genes chr3R_4_3750001 chr3R_3750001 RAL-913 3135 chr3R 3796826 3796866 chr3R 3797300 3797328 7 472 12.5 16.0 14.2 0.5 502 chr3R 3796826 intergenic not near genes chr3R 3797077 intergenic not near genes chr3R 3797328 intergenic not near genes chr3R_7_3795001 chr3R_3795001 RAL-913 3136 chr3R 4012461 4012522 chr3R 4012600 4012658 8 136 20.0 22.5 21.2 0.4 197 chr3R 4012461 intergenic not near genes chr3R 4012560 intergenic not near genes chr3R 4012658 intergenic not near genes chr3R_8_4010001 chr3R_4010001 RAL-913 3137 chr3R 4063768 4063780 chr3R 4069098 4069110 8 5330 22.5 41.0 31.8 0.2 5342 chr3R 4063768 intergenic not near genes chr3R 4066439 intergenic not near genes chr3R 4069110 intergenic not near genes chr3R_8_4065001 chr3R_4065001 RAL-913 3138 chr3R 4104997 4105058 chr3R 4110251 4110312 copia 16 5254 13.0 12.0 12.5 1.2 5315 chr3R 4104997 intergenic not near genes chr3R 4107654 intergenic not near genes chr3R 4110312 intergenic not near genes chr3R_16_4105001 chr3R_4105001 RAL-913 3139 chr3R 4132853 4132931 chr3R 4133057 4133135 13 204 21.0 18.0 19.5 0.6 282 chr3R 4132853 intron Gfat1 + chr3R 4132994 intron Gfat1 + chr3R 4133135 intron Gfat1 + chr3R_13_4130001 chr3R_4130001 RAL-913 3140 chr3R 4150519 4150559 chr3R 4150651 4150691 5 132 25.5 18.5 22.0 0.2 172 chr3R 4150519 intergenic not near genes chr3R 4150605 intergenic not near genes chr3R 4150691 intergenic not near genes chr3R_5_4150001 chr3R_4150001 RAL-913 3141 chr3R 4206025 4206096 chr3R 4211650 4211721 mdg3 34 5625 7.5 7.5 7.5 4.0 5696 chr3R 4206025 intron CG14636 - chr3R 4208873 intron CG14636 - chr3R 4211721 intron CG14636 - chr3R_34_4205001 chr3R_4205001 RAL-913 3142 chr3R 4215873 4215909 chr3R 4222575 4222646 16 6710 44.5 47.5 46.0 0.3 6773 chr3R 4215873 intron aux + chr3R 4219260 intron,exon aux +,CG31516 - chr3R 4222646 exon aux + chr3R_16_4215001 chr3R_4215001 RAL-913 3143 chr3R 4366712 4366782 chr3R 4375145 4375215 roo 27 8431 8.5 13.5 11.0 2.2 8503 chr3R 4366712 3` UTR CG1090 + chr3R 4370964 intergenic not near genes chr3R 4375215 5` UTR CR44922 + chr3R_27_4370001 chr3R_4370001 RAL-913 3144 chr3R 4376540 4376568 chr3R 4377039 4377067 7 499 31.5 31.0 31.2 0.2 527 chr3R 4376540 5` UTR CR44922 + chr3R 4376804 5` UTR CR44922 + chr3R 4377067 5` UTR CR44922 + chr3R_7_4375001 chr3R_4375001 RAL-913 3145 chr3R 4408375 4408425 chr3R 4412729 4412779 Juan 22 4351 12.5 17.0 14.8 1.4 4404 chr3R 4408375 intron CG32944 - chr3R 4410577 intron CG32944 - chr3R 4412779 intron CG32944 - chr3R_22_4410001 chr3R_4410001 RAL-913 3146 chr3R 4535787 4535813 chr3R 4536156 4536182 7 369 28.5 31.0 29.8 0.2 395 chr3R 4535787 intron CG34357 - chr3R 4535984 intron CG34357 - chr3R 4536182 intron CG34357 - chr3R_7_4535001 chr3R_4535001 RAL-913 3147 chr3R 4536864 4536929 chr3R 4536993 4537058 9 129 27.5 28.5 28.0 0.3 194 chr3R 4536864 intron CG34357 - chr3R 4536961 intron CG34357 - chr3R 4537058 intron CG34357 - chr3R_9_4535001 chr3R_4535001 RAL-913 3148 chr3R 4609508 4609573 chr3R 4610722 4610787 1360 31 1212 8.0 15.0 11.5 2.5 1279 chr3R 4609508 intergenic not near genes chr3R 4610148 intergenic not near genes chr3R 4610787 intergenic not near genes chr3R_31_4610001 chr3R_4610001 RAL-913 3149 chr3R 4653702 4653764 chr3R 4656354 4656395 9 2642 31.5 35.0 33.2 0.3 2693 chr3R 4653702 exon Karybeta3 + chr3R 4655048 5` UTR spartin + chr3R 4656395 exon spartin + chr3R_9_4655001 chr3R_4655001 RAL-913 3150 chr3R 4657792 4658050 chr3R 4657919 4658183 9 131 22.0 10.5 16.2 0.5 391 chr3R 4657792 exon spartin + chr3R 4657988 intergenic spartin + chr3R 4658183 intergenic spartin + chr3R_9_4655001 chr3R_4655001 RAL-913 3151 chr3R 4683137 4683193 chr3R 4684946 4685002 S-element 4 1809 25.5 17.5 21.5 0.2 1865 chr3R 4683137 intron CG43427 + chr3R 4684070 intron CG43427 + chr3R 4685002 intron CG43427 + chr3R_4_4680001 chr3R_4680001 RAL-913 3152 chr3R 4722294 4722303 chr3R 4722481 4722490 4 187 32.0 26.0 29.0 0.1 196 chr3R 4722294 intron Nep2 - chr3R 4722392 intron Nep2 - chr3R 4722490 intron Nep2 - chr3R_4_4720001 chr3R_4720001 RAL-913 3153 chr3R 4722304 4722368 chr3R 4722480 4722555 18 186 23.0 26.5 24.8 0.7 251 chr3R 4722304 intron Nep2 - chr3R 4722430 intron Nep2 - chr3R 4722555 intron Nep2 - chr3R_18_4720001 chr3R_4720001 RAL-913 3154 chr3R 4728971 4729026 chr3R 4729098 4729158 8 131 32.0 34.5 33.2 0.2 187 chr3R 4728971 intron Nep2 - chr3R 4729064 intron Nep2 - chr3R 4729158 intron Nep2 - chr3R_8_4725001 chr3R_4725001 RAL-913 3155 chr3R 4739079 4739142 chr3R 4739206 4739269 21 127 17.5 19.0 18.2 1.1 190 chr3R 4739079 intron tacc - chr3R 4739174 intron tacc - chr3R 4739269 intron tacc - chr3R_21_4735001 chr3R_4735001 RAL-913 3156 chr3R 4753199 4753262 chr3R 4757552 4757615 F-element 14 4349 32.5 11.0 21.8 0.6 4416 chr3R 4753199 intron,intron atms +,CG44098 - chr3R 4755407 intron,intron atms +,CG44098 - chr3R 4757615 intron,exon atms +,CG44098 - chr3R_14_4755001 chr3R_4755001 RAL-913 3157 chr3R 4759679 4759740 chr3R 4761226 4761287 hopper2 10 1545 21.0 21.5 21.2 0.5 1608 chr3R 4759679 intron,intron atms +,CG44098 - chr3R 4760483 intron,intron atms +,CG44098 - chr3R 4761287 intron,intron atms +,CG44098 - chr3R_10_4760001 chr3R_4760001 RAL-913 3158 chr3R 4769121 4769178 chr3R 4769249 4769306 17 128 12.0 11.5 11.8 1.3 185 chr3R 4769121 intron,intron atms +,CG44098 - chr3R 4769214 intron,intron atms +,CG44098 - chr3R 4769306 intron,intron atms +,CG44098 - chr3R_17_4765001 chr3R_4765001 RAL-913 3159 chr3R 4786667 4786702 chr3R 4786806 4786836 7 138 3.0 10.5 6.8 0.9 169 chr3R 4786667 3` UTR ctrip - chr3R 4786752 3` UTR ctrip - chr3R 4786836 3` UTR ctrip - chr3R_7_4785001 chr3R_4785001 RAL-913 3160 chr3R 4861545 4861592 chr3R 4861650 4861723 6 120 29.0 27.0 28.0 0.2 178 chr3R 4861545 intron opa + chr3R 4861634 intron opa + chr3R 4861723 intron opa + chr3R_6_4860001 chr3R_4860001 RAL-913 3161 chr3R 4887438 4887501 chr3R 4894857 4894921 rover 17 7425 6.5 9.5 8.0 1.9 7483 chr3R 4887438 intergenic not near genes chr3R 4891180 intergenic not near genes chr3R 4894921 intergenic not near genes chr3R_17_4890001 chr3R_4890001 RAL-913 3162 chr3R 4896262 4896301 chr3R 4896405 4896444 7 143 28.5 24.5 26.5 0.3 182 chr3R 4896262 intergenic CR45580 + chr3R 4896353 intergenic CR45580 + chr3R 4896444 5` UTR CR45580 + chr3R_7_4895001 chr3R_4895001 RAL-913 3163 chr3R 4948336 4948392 chr3R 4949008 4949064 10 672 38.0 33.5 35.8 0.3 728 chr3R 4948336 intergenic snRNA:U1:82Eb -,UbcD6 - chr3R 4948700 intergenic UbcD6 - chr3R 4949064 3` UTR UbcD6 - chr3R_10_4945001 chr3R_4945001 RAL-913 3164 chr3R 4975892 4975958 chr3R 4976043 4976109 24 150 16.5 19.5 18.0 1.3 217 chr3R 4975892 intergenic not near genes chr3R 4976000 intergenic not near genes chr3R 4976109 intergenic not near genes chr3R_24_4975001 chr3R_4975001 RAL-913 3165 chr3R 4981378 4981432 chr3R 4981507 4981544 8 122 20.5 24.5 22.5 0.3 166 chr3R 4981378 intergenic not near genes chr3R 4981461 intergenic not near genes chr3R 4981544 intergenic CG14662 - chr3R_8_4980001 chr3R_4980001 RAL-913 3166 chr3R 4998352 4998371 chr3R 4998504 4998523 7 152 29.0 40.0 34.5 0.2 171 chr3R 4998352 intron CG2022 - chr3R 4998438 intron CG2022 - chr3R 4998523 intron CG2022 - chr3R_7_4995001 chr3R_4995001 RAL-913 3167 chr3R 5013819 5013894 chr3R 5013964 5014008 17 140 20.5 17.5 19.0 0.8 189 chr3R 5013819 intergenic not near genes chr3R 5013914 intergenic not near genes chr3R 5014008 intergenic not near genes chr3R_17_5010001 chr3R_5010001 RAL-913 3168 chr3R 5045800 5045873 chr3R 5052952 5053025 HMS-Beagle 34 7151 8.0 10.0 9.0 3.4 7225 chr3R 5045800 3` UTR CR43635 - chr3R 5049412 intergenic not near genes chr3R 5053025 intergenic CR45588 - chr3R_34_5045001 chr3R_5045001 RAL-913 3169 chr3R 5055315 5055384 chr3R 5055579 5055647 20 261 30.5 27.0 28.8 0.7 332 chr3R 5055315 intergenic not near genes chr3R 5055481 intergenic not near genes chr3R 5055647 intergenic not near genes chr3R_20_5055001 chr3R_5055001 RAL-913 3170 chr3R 5067940 5068006 chr3R 5073507 5073573 mdg3 36 5566 9.5 12.5 11.0 3.0 5633 chr3R 5067940 intergenic not near genes chr3R 5070756 intergenic not near genes chr3R 5073573 intergenic not near genes chr3R_36_5070001 chr3R_5070001 RAL-913 3171 chr3R 5098816 5098881 chr3R 5098983 5099048 7 163 12.0 17.5 14.8 0.4 232 chr3R 5098816 intergenic not near genes chr3R 5098932 intergenic not near genes chr3R 5099048 intergenic not near genes chr3R_7_5095001 chr3R_5095001 RAL-913 3172 chr3R 5158099 5158167 chr3R 5158242 5158310 18 143 18.5 18.5 18.5 0.9 211 chr3R 5158099 intron dpr16 + chr3R 5158204 intron dpr16 + chr3R 5158310 intron dpr16 + chr3R_18_5155001 chr3R_5155001 RAL-913 3173 chr3R 5191366 5191444 chr3R 5191592 5191670 17 232 53.0 52.5 52.8 0.3 304 chr3R 5191366 intron cno - chr3R 5191518 intron cno - chr3R 5191670 intron cno - chr3R_17_5190001 chr3R_5190001 RAL-913 3174 chr3R 5205093 5205136 chr3R 5205235 5205278 8 141 21.0 19.5 20.2 0.4 185 chr3R 5205093 intron cno - chr3R 5205186 intron cno - chr3R 5205278 intron cno - chr3R_8_5205001 chr3R_5205001 RAL-913 3175 chr3R 5210482 5210557 chr3R 5210976 5211046 13 493 20.5 28.5 24.5 0.5 564 chr3R 5210482 intron cno - chr3R 5210764 intron cno - chr3R 5211046 intron cno - chr3R_13_5210001 chr3R_5210001 RAL-913 3176 chr3R 5223631 5223696 chr3R 5223750 5223823 17 126 23.5 27.0 25.2 0.6 192 chr3R 5223631 intergenic CG2604 - chr3R 5223727 intergenic CG2604 -,CG14664 + chr3R 5223823 intergenic CG14664 +,CG2604 - chr3R_17_5220001 chr3R_5220001 RAL-913 3177 chr3R 5278046 5278113 chr3R 5278177 5278227 15 126 31.5 26.0 28.8 0.5 181 chr3R 5278046 intron mtd - chr3R 5278136 intron mtd - chr3R 5278227 intron mtd - chr3R_15_5275001 chr3R_5275001 RAL-913 3178 chr3R 5282964 5282989 chr3R 5283071 5283116 5 119 22.5 18.0 20.2 0.2 152 chr3R 5282964 intron mtd - chr3R 5283040 intron mtd - chr3R 5283116 intron mtd - chr3R_5_5280001 chr3R_5280001 RAL-913 3179 chr3R 5331718 5331763 chr3R 5332102 5332148 7 383 23.0 28.5 25.8 0.3 430 chr3R 5331718 intron mtd - chr3R 5331933 intron mtd - chr3R 5332148 intron mtd - chr3R_7_5330001 chr3R_5330001 RAL-913 3180 chr3R 5335121 5335161 chr3R 5335250 5335290 5 125 33.0 36.0 34.5 0.1 169 chr3R 5335121 intron mtd - chr3R 5335206 intron mtd - chr3R 5335290 intron mtd - chr3R_5_5335001 chr3R_5335001 RAL-913 3181 chr3R 5337703 5337755 chr3R 5338027 5338079 16 324 25.0 14.0 19.5 0.8 376 chr3R 5337703 intron mtd - chr3R 5337891 intron mtd - chr3R 5338079 intron mtd - chr3R_16_5335001 chr3R_5335001 RAL-913 3182 chr3R 5338373 5338383 chr3R 5343600 5343610 Rt1c 8 5227 18.5 9.5 14.0 0.5 5237 chr3R 5338373 intron mtd - chr3R 5340992 intron mtd - chr3R 5343610 intron mtd - chr3R_8_5340001 chr3R_5340001 RAL-913 3183 chr3R 5445918 5445985 chr3R 5452428 5452495 Burdock 31 6510 9.5 8.5 9.0 3.1 6577 chr3R 5445918 intron CG14669 + chr3R 5449206 intron CG14669 + chr3R 5452495 intron CG14669 + chr3R_31_5445001 chr3R_5445001 RAL-913 3184 chr3R 5453287 5453346 chr3R 5453450 5453507 9 158 27.0 29.5 28.2 0.3 220 chr3R 5453287 intron CG14669 + chr3R 5453397 intron CG14669 + chr3R 5453507 intron CG14669 + chr3R_9_5450001 chr3R_5450001 RAL-913 3185 chr3R 5502258 5502295 chr3R 5502622 5502659 4 361 14.5 16.0 15.2 0.2 401 chr3R 5502258 exon CG31547 - chr3R 5502458 5` UTR CG31547 - chr3R 5502659 5` UTR CG31547 - chr3R_4_5500001 chr3R_5500001 RAL-913 3186 chr3R 5506805 5506869 chr3R 5506987 5507051 17 181 16.5 22.5 19.5 0.8 246 chr3R 5506805 intergenic not near genes chr3R 5506928 intergenic not near genes chr3R 5507051 intergenic not near genes chr3R_17_5505001 chr3R_5505001 RAL-913 3187 chr3R 5627107 5627135 chr3R 5627568 5627596 7 460 26.5 18.5 22.5 0.3 489 chr3R 5627107 intergenic not near genes chr3R 5627352 intergenic CG31551 + chr3R 5627596 intergenic CG31551 + chr3R_7_5625001 chr3R_5625001 RAL-913 3188 chr3R 5627137 5627170 chr3R 5627563 5627627 15 458 20.5 19.0 19.8 0.7 490 chr3R 5627137 intergenic not near genes chr3R 5627382 intergenic CG31551 + chr3R 5627627 intergenic CG31551 + chr3R_15_5625001 chr3R_5625001 RAL-913 3189 chr3R 5712043 5712103 chr3R 5712181 5712241 9 138 21.0 26.0 23.5 0.4 198 chr3R 5712043 3` UTR plx + chr3R 5712142 3` UTR plx + chr3R 5712241 3` UTR plx + chr3R_9_5710001 chr3R_5710001 RAL-913 3190 chr3R 5726047 5726118 chr3R 5726259 5726330 13 212 26.5 29.5 28.0 0.4 283 chr3R 5726047 intergenic not near genes chr3R 5726188 intergenic not near genes chr3R 5726330 intergenic not near genes chr3R_13_5725001 chr3R_5725001 RAL-913 3191 chr3R 5745974 5745980 chr3R 5746263 5746271 pogo 8 290 17.5 14.0 15.8 0.5 297 chr3R 5745974 3` UTR Madm + chr3R 5746122 3` UTR Madm + chr3R 5746271 3` UTR Madm + chr3R_8_5745001 chr3R_5745001 RAL-913 3192 chr3R 5745984 5746036 chr3R 5746259 5746327 pogo 25 288 8.0 13.0 10.5 2.2 343 chr3R 5745984 3` UTR Madm + chr3R 5746156 3` UTR Madm + chr3R 5746327 3` UTR Madm + chr3R_25_5745001 chr3R_5745001 RAL-913 3193 chr3R 5746974 5747027 chr3R 5753215 5753268 diver 24 6241 13.0 12.0 12.5 1.8 6294 chr3R 5746974 intergenic Madm + chr3R 5750121 intergenic not near genes chr3R 5753268 intergenic CG2091 - chr3R_24_5750001 chr3R_5750001 RAL-913 3194 chr3R 5772332 5772404 chr3R 5772540 5772612 25 208 19.0 21.5 20.2 1.2 280 chr3R 5772332 intron CG2082 - chr3R 5772472 intron CG2082 - chr3R 5772612 intron CG2082 - chr3R_25_5770001 chr3R_5770001 RAL-913 3195 chr3R 5800632 5800679 chr3R 5801292 5801355 10 674 30.5 33.0 31.8 0.3 723 chr3R 5800632 intergenic not near genes chr3R 5800994 intergenic not near genes chr3R 5801355 intergenic not near genes chr3R_10_5800001 chr3R_5800001 RAL-913 3196 chr3R 5809073 5809138 chr3R 5809364 5809429 pogo 37 290 9.5 10.0 9.8 3.4 356 chr3R 5809073 3` UTR CG11000 + chr3R 5809251 3` UTR CG11000 + chr3R 5809429 3` UTR CG11000 + chr3R_37_5805001 chr3R_5805001 RAL-913 3197 chr3R 5822344 5822400 chr3R 5823561 5823572 1360 32 1215 11.5 12.0 11.8 2.5 1228 chr3R 5822344 3` UTR CG2023 - chr3R 5822958 3` UTR CG2023 - chr3R 5823572 3` UTR CG2023 - chr3R_32_5820001 chr3R_5820001 RAL-913 3198 chr3R 5836159 5836175 chr3R 5836313 5836329 13 154 18.5 21.0 19.8 0.6 170 chr3R 5836159 exon,3` UTR CG1208 +,CR45192 - chr3R 5836244 intron CG1208 + chr3R 5836329 intron CG1208 + chr3R_13_5835001 chr3R_5835001 RAL-913 3199 chr3R 5860507 5860573 chr3R 5860660 5860726 7 152 22.0 23.5 22.8 0.3 219 chr3R 5860507 intron CG2017 - chr3R 5860616 intron CG2017 - chr3R 5860726 intron CG2017 - chr3R_7_5860001 chr3R_5860001 RAL-913 3200 chr3R 5896924 5896989 chr3R 5897333 5897370 16 404 21.5 31.0 26.2 0.6 446 chr3R 5896924 intron CG34113 - chr3R 5897147 intron CG34113 - chr3R 5897370 intron CG34113 - chr3R_16_5895001 chr3R_5895001 RAL-913 3201 chr3R 5900755 5900813 chr3R 5900891 5900948 15 130 23.0 21.5 22.2 0.6 193 chr3R 5900755 intron CG34113 - chr3R 5900852 intron CG34113 - chr3R 5900948 intron CG34113 - chr3R_15_5900001 chr3R_5900001 RAL-913 3202 chr3R 5916017 5916084 chr3R 5916187 5916254 10 168 30.0 33.0 31.5 0.3 237 chr3R 5916017 intron CG34113 - chr3R 5916136 intron CG34113 - chr3R 5916254 intron CG34113 - chr3R_10_5915001 chr3R_5915001 RAL-913 3203 chr3R 5927523 5927579 chr3R 5927813 5927869 pogo 31 290 10.5 14.0 12.2 2.3 346 chr3R 5927523 intron CG34113 - chr3R 5927696 intron CG34113 - chr3R 5927869 intron CG34113 - chr3R_31_5925001 chr3R_5925001 RAL-913 3204 chr3R 5931418 5931432 chr3R 5931556 5931564 8 137 11.0 13.0 12.0 0.6 146 chr3R 5931418 intron CG34113 - chr3R 5931491 intron CG34113 - chr3R 5931564 intron CG34113 - chr3R_8_5930001 chr3R_5930001 RAL-913 3205 chr3R 5931433 5931457 chr3R 5931552 5931594 6 133 6.0 13.0 9.5 0.6 161 chr3R 5931433 intron CG34113 - chr3R 5931514 intron CG34113 - chr3R 5931594 intron CG34113 - chr3R_6_5930001 chr3R_5930001 RAL-913 3206 chr3R 5989296 5989351 chr3R 5989429 5989479 12 132 23.5 18.0 20.8 0.6 183 chr3R 5989296 5` UTR CR44927 + chr3R 5989388 5` UTR CR44927 + chr3R 5989479 5` UTR CR44927 + chr3R_12_5985001 chr3R_5985001 RAL-913 3207 chr3R 5992002 5992073 chr3R 5992169 5992240 14 167 30.0 30.0 30.0 0.5 238 chr3R 5992002 intergenic not near genes chr3R 5992121 intergenic not near genes chr3R 5992240 intergenic not near genes chr3R_14_5990001 chr3R_5990001 RAL-913 3208 chr3R 6015946 6015989 chr3R 6024446 6024519 Tirant 22 8518 5.5 9.0 7.2 2.7 8573 chr3R 6015946 intergenic not near genes chr3R 6020232 intergenic not near genes chr3R 6024519 intergenic not near genes chr3R_22_6020001 chr3R_6020001 RAL-913 3209 chr3R 6028175 6028198 chr3R 6028277 6028329 6 125 18.5 19.0 18.8 0.3 154 chr3R 6028175 intergenic not near genes chr3R 6028252 intergenic not near genes chr3R 6028329 intergenic not near genes chr3R_6_6025001 chr3R_6025001 RAL-913 3210 chr3R 6029927 6029983 chr3R 6030163 6030234 8 249 18.5 23.5 21.0 0.4 307 chr3R 6029927 intergenic not near genes chr3R 6030080 intergenic not near genes chr3R 6030234 intergenic not near genes chr3R_8_6030001 chr3R_6030001 RAL-913 3211 chr3R 6048402 6048430 chr3R 6048535 6048562 10 133 27.0 23.0 25.0 0.4 160 chr3R 6048402 intergenic not near genes chr3R 6048482 intergenic not near genes chr3R 6048562 intergenic not near genes chr3R_10_6045001 chr3R_6045001 RAL-913 3212 chr3R 6048431 6048471 chr3R 6048530 6048586 8 121 26.0 23.0 24.5 0.3 155 chr3R 6048431 intergenic not near genes chr3R 6048508 intergenic not near genes chr3R 6048586 intergenic not near genes chr3R_8_6045001 chr3R_6045001 RAL-913 3213 chr3R 6058650 6058709 chr3R 6058778 6058837 9 126 23.0 20.0 21.5 0.4 187 chr3R 6058650 intergenic not near genes chr3R 6058744 intergenic not near genes chr3R 6058837 intergenic not near genes chr3R_9_6055001 chr3R_6055001 RAL-913 3214 chr3R 6068636 6068698 chr3R 6068782 6068839 10 146 25.5 24.0 24.8 0.4 203 chr3R 6068636 intergenic not near genes chr3R 6068738 intergenic not near genes chr3R 6068839 intergenic not near genes chr3R_10_6065001 chr3R_6065001 RAL-913 3215 chr3R 6109456 6109523 chr3R 6109632 6109699 19 176 20.5 21.5 21.0 0.9 243 chr3R 6109456 exon Obp83cd + chr3R 6109578 exon Obp83cd + chr3R 6109699 3` UTR,3` UTR Obp83cd +,Obp83ef - chr3R_19_6105001 chr3R_6105001 RAL-913 3216 chr3R 6117374 6117415 chr3R 6117545 6117586 9 169 15.5 13.5 14.5 0.6 212 chr3R 6117374 intergenic not near genes chr3R 6117480 intergenic not near genes chr3R 6117586 intergenic not near genes chr3R_9_6115001 chr3R_6115001 RAL-913 3217 chr3R 6117416 6117432 chr3R 6117535 6117603 8 163 13.0 11.0 12.0 0.6 187 chr3R 6117416 intergenic not near genes chr3R 6117510 intergenic not near genes chr3R 6117603 intergenic not near genes chr3R_8_6115001 chr3R_6115001 RAL-913 3218 chr3R 6121135 6121178 chr3R 6121370 6121446 BS 13 243 18.5 9.0 13.8 0.9 311 chr3R 6121135 intergenic not near genes chr3R 6121290 intergenic not near genes chr3R 6121446 intergenic not near genes chr3R_13_6120001 chr3R_6120001 RAL-913 3219 chr3R 6130846 6130907 chr3R 6130983 6131044 12 137 29.0 28.5 28.8 0.4 198 chr3R 6130846 intergenic not near genes chr3R 6130945 intergenic not near genes chr3R 6131044 intergenic not near genes chr3R_12_6130001 chr3R_6130001 RAL-913 3220 chr3R 6158466 6158536 chr3R 6167099 6167163 Tirant 20 8626 8.0 8.0 8.0 2.2 8697 chr3R 6158466 intergenic not near genes chr3R 6162814 intergenic not near genes chr3R 6167163 intergenic CG1077 + chr3R_20_6160001 chr3R_6160001 RAL-913 3221 chr3R 6175127 6175193 chr3R 6182449 6182515 HMS-Beagle2 26 7321 11.5 10.0 10.8 2.2 7388 chr3R 6175127 intergenic Osi1 + chr3R 6178821 intron CR45194 + chr3R 6182515 intergenic CR45194 + chr3R_26_6175001 chr3R_6175001 RAL-913 3222 chr3R 6188854 6188915 chr3R 6188981 6189041 16 127 22.0 18.5 20.2 0.8 187 chr3R 6188854 intron NPFR + chr3R 6188948 intron NPFR + chr3R 6189041 5` UTR NPFR + chr3R_16_6185001 chr3R_6185001 RAL-913 3223 chr3R 6191125 6191192 chr3R 6191255 6191322 29 129 13.5 8.5 11.0 2.4 197 chr3R 6191125 intron NPFR + chr3R 6191224 intron NPFR + chr3R 6191322 intron NPFR + chr3R_29_6190001 chr3R_6190001 RAL-913 3224 chr3R 6206248 6206291 chr3R 6206515 6206558 BS 10 262 20.5 17.5 19.0 0.5 310 chr3R 6206248 exon Osi24 + chr3R 6206403 intron Osi24 + chr3R 6206558 intron Osi24 + chr3R_10_6205001 chr3R_6205001 RAL-913 3225 chr3R 6245428 6245483 chr3R 6245560 6245616 12 128 29.5 25.0 27.2 0.4 188 chr3R 6245428 intergenic not near genes chr3R 6245522 intergenic not near genes chr3R 6245616 intergenic not near genes chr3R_12_6245001 chr3R_6245001 RAL-913 3226 chr3R 6310348 6310417 chr3R 6310695 6310753 8 334 28.0 23.0 25.5 0.3 405 chr3R 6310348 exon CG31560 + chr3R 6310550 exon CG31560 + chr3R 6310753 exon CG31560 + chr3R_8_6310001 chr3R_6310001 RAL-913 3227 chr3R 6316727 6316800 chr3R 6316870 6316921 12 141 30.5 24.5 27.5 0.4 194 chr3R 6316727 intron Osi17 + chr3R 6316824 intron Osi17 + chr3R 6316921 intron Osi17 + chr3R_12_6315001 chr3R_6315001 RAL-913 3228 chr3R 6334782 6334798 chr3R 6334930 6334946 8 148 2.5 15.0 8.8 0.8 164 chr3R 6334782 intergenic not near genes chr3R 6334864 intergenic Osi19 + chr3R 6334946 intergenic Osi19 + chr3R_8_6330001 chr3R_6330001 RAL-913 3229 chr3R 6348401 6348443 chr3R 6348547 6348589 6 146 23.5 27.5 25.5 0.2 188 chr3R 6348401 intergenic not near genes chr3R 6348495 intergenic not near genes chr3R 6348589 intergenic not near genes chr3R_6_6345001 chr3R_6345001 RAL-913 3230 chr3R 6421073 6421134 chr3R 6421277 6421348 15 209 10.0 15.5 12.8 1.1 275 chr3R 6421073 intron gpp + chr3R 6421210 intron gpp + chr3R 6421348 intron gpp + chr3R_15_6420001 chr3R_6420001 RAL-913 3231 chr3R 6461560 6461593 chr3R 6461690 6461722 13 130 31.0 33.5 32.2 0.4 162 chr3R 6461560 intergenic not near genes chr3R 6461641 intergenic not near genes chr3R 6461722 intergenic not near genes chr3R_13_6460001 chr3R_6460001 RAL-913 3232 chr3R 6509980 6510045 chr3R 6515111 6515176 jockey 36 5131 7.0 11.5 9.2 3.5 5196 chr3R 6509980 intergenic not near genes chr3R 6512578 intergenic not near genes chr3R 6515176 intergenic not near genes chr3R_36_6510001 chr3R_6510001 RAL-913 3233 chr3R 6523273 6523342 chr3R 6523698 6523768 10 420 27.0 30.5 28.8 0.3 495 chr3R 6523273 intergenic not near genes chr3R 6523520 intergenic not near genes chr3R 6523768 intergenic not near genes chr3R_10_6520001 chr3R_6520001 RAL-913 3234 chr3R 6550276 6550345 chr3R 6550407 6550476 12 130 24.0 24.5 24.2 0.5 200 chr3R 6550276 intron dpr11 - chr3R 6550376 intron dpr11 - chr3R 6550476 intron dpr11 - chr3R_12_6550001 chr3R_6550001 RAL-913 3235 chr3R 6557782 6557829 chr3R 6557903 6557927 6 104 23.0 26.5 24.8 0.2 145 chr3R 6557782 intron dpr11 - chr3R 6557854 intron dpr11 - chr3R 6557927 intron dpr11 - chr3R_6_6555001 chr3R_6555001 RAL-913 3236 chr3R 6561919 6561974 chr3R 6562053 6562108 12 134 29.0 34.5 31.8 0.4 189 chr3R 6561919 intron dpr11 - chr3R 6562014 intron dpr11 - chr3R 6562108 intron dpr11 - chr3R_12_6560001 chr3R_6560001 RAL-913 3237 chr3R 6578839 6578903 chr3R 6579009 6579073 13 167 20.5 15.5 18.0 0.7 234 chr3R 6578839 intron dpr11 - chr3R 6578956 intron dpr11 - chr3R 6579073 intron dpr11 - chr3R_13_6575001 chr3R_6575001 RAL-913 3238 chr3R 6610000 6610013 chr3R 6610202 6610215 4 202 28.5 31.5 30.0 0.1 215 chr3R 6610000 intergenic not near genes chr3R 6610108 intergenic not near genes chr3R 6610215 intergenic not near genes chr3R_4_6610001 chr3R_6610001 RAL-913 3239 chr3R 6610030 6610077 chr3R 6610199 6610279 10 195 26.5 31.0 28.8 0.3 249 chr3R 6610030 intergenic not near genes chr3R 6610154 intergenic not near genes chr3R 6610279 intergenic not near genes chr3R_10_6610001 chr3R_6610001 RAL-913 3240 chr3R 6624212 6624280 chr3R 6624344 6624412 15 132 28.5 26.5 27.5 0.5 200 chr3R 6624212 intergenic not near genes chr3R 6624312 intergenic not near genes chr3R 6624412 intergenic not near genes chr3R_15_6620001 chr3R_6620001 RAL-913 3241 chr3R 6689296 6689365 chr3R 6689428 6689497 10 132 28.5 27.5 28.0 0.3 201 chr3R 6689296 intergenic Ccp84Af - chr3R 6689396 intergenic Ccp84Af - chr3R 6689497 intergenic Ccp84Af - chr3R_10_6685001 chr3R_6685001 RAL-913 3242 chr3R 6697269 6697312 chr3R 6697405 6697448 8 136 34.5 29.5 32.0 0.2 179 chr3R 6697269 intergenic not near genes chr3R 6697358 intergenic not near genes chr3R 6697448 intergenic not near genes chr3R_8_6695001 chr3R_6695001 RAL-913 3243 chr3R 6705627 6705706 chr3R 6705908 6705980 7 275 24.5 25.0 24.8 0.3 353 chr3R 6705627 intergenic not near genes chr3R 6705804 intergenic not near genes chr3R 6705980 intergenic not near genes chr3R_7_6705001 chr3R_6705001 RAL-913 3244 chr3R 6737455 6737520 chr3R 6739292 6739357 Doc 23 1831 6.0 13.5 9.8 2.1 1902 chr3R 6737455 intron pb - chr3R 6738406 intron pb - chr3R 6739357 intron pb - chr3R_23_6735001 chr3R_6735001 RAL-913 3245 chr3R 6796142 6796211 chr3R 6796300 6796369 12 158 27.5 31.5 29.5 0.4 227 chr3R 6796142 intron Dfd + chr3R 6796256 intron Dfd + chr3R 6796369 intron Dfd + chr3R_12_6795001 chr3R_6795001 RAL-913 3246 chr3R 6804158 6804228 chr3R 6804317 6804381 16 158 8.5 11.0 9.8 1.5 223 chr3R 6804158 intergenic not near genes chr3R 6804270 intergenic not near genes chr3R 6804381 intergenic not near genes chr3R_16_6800001 chr3R_6800001 RAL-913 3247 chr3R 6840953 6841021 chr3R 6841105 6841175 11 153 22.5 26.5 24.5 0.4 222 chr3R 6840953 intron Scr - chr3R 6841064 intron Scr - chr3R 6841175 intron Scr - chr3R_11_6840001 chr3R_6840001 RAL-913 3248 chr3R 6856348 6856399 chr3R 6856515 6856566 11 167 26.5 26.5 26.5 0.4 218 chr3R 6856348 intergenic not near genes chr3R 6856457 intergenic not near genes chr3R 6856566 intergenic not near genes chr3R_11_6855001 chr3R_6855001 RAL-913 3249 chr3R 6862177 6862238 chr3R 6862314 6862375 15 136 31.0 29.0 30.0 0.5 198 chr3R 6862177 intergenic not near genes chr3R 6862276 intergenic not near genes chr3R 6862375 intergenic not near genes chr3R_15_6860001 chr3R_6860001 RAL-913 3250 chr3R 6867049 6867099 chr3R 6867177 6867227 7 126 24.5 28.0 26.2 0.3 178 chr3R 6867049 intergenic not near genes chr3R 6867138 intergenic not near genes chr3R 6867227 intergenic not near genes chr3R_7_6865001 chr3R_6865001 RAL-913 3251 chr3R 6891210 6891265 chr3R 6891326 6891391 8 115 3.5 7.5 5.5 1.2 181 chr3R 6891210 intergenic not near genes chr3R 6891300 intergenic not near genes chr3R 6891391 intergenic not near genes chr3R_8_6890001 chr3R_6890001 RAL-913 3252 chr3R 6900963 6901008 chr3R 6908245 6908312 9 7285 45.0 50.0 47.5 0.2 7349 chr3R 6900963 intron Antp - chr3R 6904638 intron,3` UTR Antp -,CR43252 - chr3R 6908312 intron Antp - chr3R_9_6900001 chr3R_6900001 RAL-913 3253 chr3R 6933196 6933246 chr3R 6933463 6933513 11 267 24.0 33.0 28.5 0.4 317 chr3R 6933196 intron Antp - chr3R 6933354 intron Antp - chr3R 6933513 intron Antp - chr3R_11_6930001 chr3R_6930001 RAL-913 3254 chr3R 6978837 6978912 chr3R 6978972 6978972 24 132 25.5 24.5 25.0 0.9 135 chr3R 6978837 intron Antp - chr3R 6978904 intron Antp - chr3R 6978972 intron Antp - chr3R_24_6975001 chr3R_6975001 RAL-913 3255 chr3R 7015946 7015961 chr3R 7016073 7016088 6 125 16.0 2.5 9.2 0.6 142 chr3R 7015946 intergenic not near genes chr3R 7016017 intergenic not near genes chr3R 7016088 intergenic not near genes chr3R_6_7015001 chr3R_7015001 RAL-913 3256 chr3R 7030658 7030728 chr3R 7030784 7030854 17 126 32.5 24.5 28.5 0.6 196 chr3R 7030658 intergenic not near genes chr3R 7030756 intergenic not near genes chr3R 7030854 intergenic not near genes chr3R_17_7030001 chr3R_7030001 RAL-913 3257 chr3R 7036728 7036782 chr3R 7036857 7036911 9 129 30.0 38.0 34.0 0.3 183 chr3R 7036728 intergenic not near genes chr3R 7036820 intergenic not near genes chr3R 7036911 intergenic not near genes chr3R_9_7035001 chr3R_7035001 RAL-913 3258 chr3R 7092759 7092806 chr3R 7093362 7093420 15 613 20.5 22.5 21.5 0.7 661 chr3R 7092759 3` UTR CR43685 - chr3R 7093090 intron CR43685 - chr3R 7093420 3` UTR CR43685 - chr3R_15_7090001 chr3R_7090001 RAL-913 3259 chr3R 7103238 7103297 chr3R 7103363 7103412 6 116 17.5 17.0 17.2 0.3 174 chr3R 7103238 intron Alh - chr3R 7103325 intron Alh - chr3R 7103412 intron Alh - chr3R_6_7100001 chr3R_7100001 RAL-913 3260 chr3R 7103886 7103958 chr3R 7104035 7104107 15 149 26.0 31.0 28.5 0.5 221 chr3R 7103886 intron Alh - chr3R 7103996 intron Alh - chr3R 7104107 intron Alh - chr3R_15_7100001 chr3R_7100001 RAL-913 3261 chr3R 7105286 7105341 chr3R 7105419 7105450 14 129 23.0 18.5 20.8 0.6 164 chr3R 7105286 intron Alh - chr3R 7105368 intron Alh - chr3R 7105450 intron Alh - chr3R_14_7105001 chr3R_7105001 RAL-913 3262 chr3R 7110538 7110604 chr3R 7110667 7110733 10 129 28.0 26.0 27.0 0.4 195 chr3R 7110538 intron Alh - chr3R 7110636 intron Alh - chr3R 7110733 intron Alh - chr3R_10_7110001 chr3R_7110001 RAL-913 3263 chr3R 7121702 7121717 chr3R 7121832 7121850 5 132 12.5 12.0 12.2 0.4 148 chr3R 7121702 exon Alh - chr3R 7121776 intron Alh - chr3R 7121850 intron Alh - chr3R_5_7120001 chr3R_7120001 RAL-913 3264 chr3R 7126468 7126525 chr3R 7126613 7126670 12 144 22.5 25.5 24.0 0.5 202 chr3R 7126468 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126569 3` UTR CG10068 - chr3R 7126670 3` UTR CG10068 - chr3R_12_7125001 chr3R_7125001 RAL-913 3265 chr3R 7132796 7132871 chr3R 7132937 7133012 28 140 28.5 27.0 27.8 1.0 216 chr3R 7132796 intergenic CG31493 + chr3R 7132904 intergenic CG31493 + chr3R 7133012 intergenic CG31493 + chr3R_28_7130001 chr3R_7130001 RAL-913 3266 chr3R 7173633 7173701 chr3R 7173763 7173831 37 129 10.0 11.5 10.8 3.1 198 chr3R 7173633 intron sas + chr3R 7173732 intron sas + chr3R 7173831 intron sas + chr3R_37_7170001 chr3R_7170001 RAL-913 3267 chr3R 7210557 7210611 chr3R 7210684 7210747 8 132 29.0 32.5 30.8 0.3 190 chr3R 7210557 intergenic not near genes chr3R 7210652 intergenic not near genes chr3R 7210747 intergenic not near genes chr3R_8_7210001 chr3R_7210001 RAL-913 3268 chr3R 7217420 7217476 chr3R 7217691 7217747 11 271 21.5 24.0 22.8 0.5 327 chr3R 7217420 intergenic CG14605 -,CG14606 - chr3R 7217584 intergenic CG14605 - chr3R 7217747 exon CG14605 - chr3R_11_7215001 chr3R_7215001 RAL-913 3269 chr3R 7269881 7269908 chr3R 7270025 7270052 10 144 32.0 28.0 30.0 0.3 171 chr3R 7269881 3` UTR Syt4 + chr3R 7269966 3` UTR Syt4 + chr3R 7270052 3` UTR Syt4 + chr3R_10_7265001 chr3R_7265001 RAL-913 3270 chr3R 7280582 7280645 chr3R 7280794 7280852 15 212 40.0 28.0 34.0 0.4 270 chr3R 7280582 intron rn - chr3R 7280717 intron rn - chr3R 7280852 intron rn - chr3R_15_7280001 chr3R_7280001 RAL-913 3271 chr3R 7302247 7302326 chr3R 7302389 7302468 22 142 14.5 19.5 17.0 1.2 221 chr3R 7302247 intron rn - chr3R 7302358 intron rn - chr3R 7302468 intron rn - chr3R_22_7300001 chr3R_7300001 RAL-913 3272 chr3R 7314748 7314806 chr3R 7314902 7314962 11 161 18.5 20.0 19.2 0.5 214 chr3R 7314748 intergenic not near genes chr3R 7314855 intergenic not near genes chr3R 7314962 intergenic CG10029 - chr3R_11_7310001 chr3R_7310001 RAL-913 3273 chr3R 7319770 7319784 chr3R 7319901 7319915 4 131 15.5 20.0 17.8 0.2 145 chr3R 7319770 intergenic not near genes chr3R 7319842 intergenic not near genes chr3R 7319915 intergenic not near genes chr3R_4_7315001 chr3R_7315001 RAL-913 3274 chr3R 7349642 7349684 chr3R 7355703 7355745 micropia 11 6061 12.0 27.0 19.5 0.5 6103 chr3R 7349642 intergenic CG43290 - chr3R 7352694 intergenic not near genes chr3R 7355745 intergenic not near genes chr3R_11_7350001 chr3R_7350001 RAL-913 3275 chr3R 7359020 7359080 chr3R 7359149 7359209 13 129 27.0 29.0 28.0 0.4 189 chr3R 7359020 intergenic not near genes chr3R 7359114 intergenic not near genes chr3R 7359209 intergenic not near genes chr3R_13_7355001 chr3R_7355001 RAL-913 3276 chr3R 7396013 7396081 chr3R 7396158 7396226 12 145 31.5 37.5 34.5 0.3 213 chr3R 7396013 intergenic not near genes chr3R 7396120 intergenic not near genes chr3R 7396226 intergenic not near genes chr3R_12_7395001 chr3R_7395001 RAL-913 3277 chr3R 7396323 7396389 chr3R 7396476 7396542 20 153 27.0 33.5 30.2 0.6 219 chr3R 7396323 intergenic not near genes chr3R 7396432 intergenic not near genes chr3R 7396542 intergenic not near genes chr3R_20_7395001 chr3R_7395001 RAL-913 3278 chr3R 7401694 7401763 chr3R 7401850 7401908 14 155 29.0 27.5 28.2 0.5 214 chr3R 7401694 intergenic not near genes chr3R 7401801 intergenic not near genes chr3R 7401908 intergenic not near genes chr3R_14_7400001 chr3R_7400001 RAL-913 3279 chr3R 7404946 7404971 chr3R 7405072 7405097 14 126 4.0 16.0 10.0 1.3 151 chr3R 7404946 intergenic not near genes chr3R 7405022 intergenic not near genes chr3R 7405097 intergenic not near genes chr3R_14_7405001 chr3R_7405001 RAL-913 3280 chr3R 7428673 7428733 chr3R 7428899 7428957 16 225 30.0 27.0 28.5 0.5 284 chr3R 7428673 intergenic not near genes chr3R 7428815 intergenic not near genes chr3R 7428957 intergenic not near genes chr3R_16_7425001 chr3R_7425001 RAL-913 3281 chr3R 7437621 7437693 chr3R 7437938 7437980 10 309 20.5 28.0 24.2 0.4 359 chr3R 7437621 intergenic not near genes chr3R 7437800 intergenic not near genes chr3R 7437980 intergenic not near genes chr3R_10_7435001 chr3R_7435001 RAL-913 3282 chr3R 7444892 7444956 chr3R 7445023 7445087 14 128 23.5 27.0 25.2 0.5 195 chr3R 7444892 intergenic not near genes chr3R 7444990 intergenic not near genes chr3R 7445087 intergenic not near genes chr3R_14_7440001 chr3R_7440001 RAL-913 3283 chr3R 7447946 7447998 chr3R 7448074 7448126 11 128 22.0 23.0 22.5 0.5 180 chr3R 7447946 intergenic not near genes chr3R 7448036 intergenic not near genes chr3R 7448126 intergenic not near genes chr3R_11_7445001 chr3R_7445001 RAL-913 3284 chr3R 7481787 7481858 chr3R 7481915 7481939 13 119 19.5 19.0 19.2 0.6 152 chr3R 7481787 intergenic not near genes chr3R 7481863 intergenic not near genes chr3R 7481939 intergenic not near genes chr3R_13_7480001 chr3R_7480001 RAL-913 3285 chr3R 7492556 7492619 chr3R 7492683 7492746 23 127 28.0 24.5 26.2 0.8 190 chr3R 7492556 intron alpha-Est10 - chr3R 7492651 intron alpha-Est10 - chr3R 7492746 intron alpha-Est10 - chr3R_23_7490001 chr3R_7490001 RAL-913 3286 chr3R 7542416 7542451 chr3R 7542544 7542578 11 128 15.5 4.0 9.8 1.0 162 chr3R 7542416 intron alpha-Est2 + chr3R 7542497 intron alpha-Est2 + chr3R 7542578 intron alpha-Est2 + chr3R_11_7540001 chr3R_7540001 RAL-913 3287 chr3R 7548567 7548634 chr3R 7548696 7548740 23 128 12.5 15.5 14.0 1.5 173 chr3R 7548567 intron alpha-Est1 - chr3R 7548654 intron alpha-Est1 - chr3R 7548740 intron alpha-Est1 - chr3R_23_7545001 chr3R_7545001 RAL-913 3288 chr3R 7556911 7556959 chr3R 7557044 7557102 12 142 5.5 19.0 12.2 0.9 191 chr3R 7556911 intergenic not near genes chr3R 7557006 intergenic not near genes chr3R 7557102 intergenic not near genes chr3R_12_7555001 chr3R_7555001 RAL-913 3289 chr3R 7565965 7565992 chr3R 7566096 7566123 8 131 20.5 27.5 24.0 0.3 158 chr3R 7565965 intergenic not near genes chr3R 7566044 intergenic not near genes chr3R 7566123 intergenic not near genes chr3R_8_7565001 chr3R_7565001 RAL-913 3290 chr3R 7621488 7621504 chr3R 7621628 7621644 10 139 4.0 8.0 6.0 1.4 156 chr3R 7621488 intron CG34127 - chr3R 7621566 intron CG34127 - chr3R 7621644 intron CG34127 - chr3R_10_7620001 chr3R_7620001 RAL-913 3291 chr3R 7621506 7621556 chr3R 7621625 7621693 12 132 4.0 7.5 5.8 1.8 187 chr3R 7621506 intron CG34127 - chr3R 7621600 intron CG34127 - chr3R 7621693 intron CG34127 - chr3R_12_7620001 chr3R_7620001 RAL-913 3292 chr3R 7635605 7635675 chr3R 7635738 7635808 21 133 19.0 21.5 20.2 1.0 203 chr3R 7635605 intron CG34127 - chr3R 7635706 intron CG34127 - chr3R 7635808 intron CG34127 - chr3R_21_7635001 chr3R_7635001 RAL-913 3293 chr3R 7677870 7677941 chr3R 7678033 7678104 36 157 6.5 6.5 6.5 4.8 234 chr3R 7677870 intron Nlg1 + chr3R 7677987 intron Nlg1 + chr3R 7678104 intron Nlg1 + chr3R_36_7675001 chr3R_7675001 RAL-913 3294 chr3R 7694536 7694607 chr3R 7713647 7713718 invader3 29 19111 9.0 10.5 9.8 2.7 19182 chr3R 7694536 3` UTR Nlg1 + chr3R 7704127 intergenic not near genes chr3R 7713718 intergenic not near genes chr3R_29_7700001 chr3R_7700001 RAL-913 3295 chr3R 7716700 7716761 chr3R 7716840 7716901 11 138 27.5 31.0 29.2 0.4 201 chr3R 7716700 intergenic not near genes chr3R 7716800 intergenic not near genes chr3R 7716901 intergenic not near genes chr3R_11_7715001 chr3R_7715001 RAL-913 3296 chr3R 7724403 7724474 chr3R 7724537 7724565 22 133 16.0 17.5 16.8 1.2 162 chr3R 7724403 3` UTR CG2616 + chr3R 7724484 3` UTR CG2616 + chr3R 7724565 3` UTR CG2616 + chr3R_22_7720001 chr3R_7720001 RAL-913 3297 chr3R 7729423 7729498 chr3R 7737411 7737485 Stalker2 25 7988 11.0 8.0 9.5 2.4 8062 chr3R 7729423 intergenic not near genes chr3R 7733454 intergenic not near genes chr3R 7737485 intergenic not near genes chr3R_25_7730001 chr3R_7730001 RAL-913 3298 chr3R 7793297 7793351 chr3R 7793423 7793444 5 119 19.0 10.5 14.8 0.3 147 chr3R 7793297 3` UTR CG10086 + chr3R 7793370 3` UTR CG10086 + chr3R 7793444 3` UTR CG10086 + chr3R_5_7790001 chr3R_7790001 RAL-913 3299 chr3R 7821671 7821732 chr3R 7821817 7821878 17 146 29.0 24.0 26.5 0.6 207 chr3R 7821671 intron CG34384 + chr3R 7821774 intron CG34384 + chr3R 7821878 intron CG34384 + chr3R_17_7820001 chr3R_7820001 RAL-913 3300 chr3R 7830268 7830323 chr3R 7830452 7830524 9 191 21.5 18.5 20.0 0.4 256 chr3R 7830268 intron CG34384 + chr3R 7830396 intron CG34384 + chr3R 7830524 intron CG34384 + chr3R_9_7830001 chr3R_7830001 RAL-913 3301 chr3R 7832716 7832732 chr3R 7832843 7832850 4 125 21.5 21.5 21.5 0.2 134 chr3R 7832716 intron CG34384 + chr3R 7832783 intron CG34384 + chr3R 7832850 intron CG34384 + chr3R_4_7830001 chr3R_7830001 RAL-913 3302 chr3R 7832734 7832746 chr3R 7832837 7832873 4 113 16.5 20.5 18.5 0.2 139 chr3R 7832734 intron CG34384 + chr3R 7832804 intron CG34384 + chr3R 7832873 intron CG34384 + chr3R_4_7830001 chr3R_7830001 RAL-913 3303 chr3R 7834632 7834702 chr3R 7834839 7834909 15 205 32.5 35.0 33.8 0.4 277 chr3R 7834632 intron CG34384 + chr3R 7834770 intron CG34384 + chr3R 7834909 intron CG34384 + chr3R_15_7830001 chr3R_7830001 RAL-913 3304 chr3R 7849606 7849665 chr3R 7850821 7850882 1360 23 1216 7.5 10.0 8.8 2.3 1276 chr3R 7849606 intron CG34384 + chr3R 7850244 intron CG34384 + chr3R 7850882 intron CG34384 + chr3R_23_7850001 chr3R_7850001 RAL-913 3305 chr3R 7773344 7773344 chr3R 7890531 7890533 6 117189 40.0 29.5 34.8 0.2 117189 chr3R 7773344 intergenic not near genes chr3R 7831938 intron CG34384 + chr3R 7890533 intron mRpS9 - chr3R_6_7830001 chr3R_7830001 RAL-913 3306 chr3R 7951415 7951483 chr3R 7951564 7951632 17 149 16.0 25.5 20.8 0.8 217 chr3R 7951415 intron dsx - chr3R 7951524 intron dsx - chr3R 7951632 intron dsx - chr3R_17_7950001 chr3R_7950001 RAL-913 3307 chr3R 7973282 7973333 chr3R 7974394 7974445 1360 33 1112 16.5 13.0 14.8 2.1 1163 chr3R 7973282 intergenic not near genes chr3R 7973864 intergenic not near genes chr3R 7974445 3` UTR CD98hc - chr3R_33_7970001 chr3R_7970001 RAL-913 3308 chr3R 7984906 7984966 chr3R 7985034 7985094 11 125 21.0 21.5 21.2 0.5 188 chr3R 7984906 exon CG2781 - chr3R 7985000 intron CG2781 - chr3R 7985094 intron CG2781 - chr3R_11_7985001 chr3R_7985001 RAL-913 3309 chr3R 8049345 8049388 chr3R 8049583 8049625 9 236 21.5 26.0 23.8 0.4 280 chr3R 8049345 intron,intron CG43060 +,CG43618 + chr3R 8049485 intron CG43060 + chr3R 8049625 intron CG43060 + chr3R_9_8045001 chr3R_8045001 RAL-913 3310 chr3R 8062607 8062675 chr3R 8062759 8062827 14 152 8.0 16.0 12.0 1.1 220 chr3R 8062607 intron mAChR-B + chr3R 8062717 intron mAChR-B + chr3R 8062827 intron mAChR-B + chr3R_14_8060001 chr3R_8060001 RAL-913 3311 chr3R 8090221 8090298 chr3R 8090448 8090525 32 227 7.0 4.5 5.8 4.7 304 chr3R 8090221 5` UTR CR44330 + chr3R 8090373 intergenic CR44330 + chr3R 8090525 intergenic CR44330 + chr3R_32_8090001 chr3R_8090001 RAL-913 3312 chr3R 8090515 8090552 chr3R 8094042 8094078 297 5 3522 5.0 14.0 9.5 0.5 3563 chr3R 8090515 intergenic CR44330 + chr3R 8092296 intergenic not near genes chr3R 8094078 intergenic CG7900 + chr3R_5_8090001 chr3R_8090001 RAL-913 3313 chr3R 8094371 8094387 chr3R 8099726 8099742 Transpac 8 5355 17.5 14.5 16.0 0.5 5371 chr3R 8094371 intron CG7900 + chr3R 8097056 intron CG7900 + chr3R 8099742 intron CG7900 + chr3R_8_8095001 chr3R_8095001 RAL-913 3314 chr3R 8094388 8094426 chr3R 8099722 8099781 Transpac 19 5354 6.5 13.5 10.0 1.7 5393 chr3R 8094388 intron CG7900 + chr3R 8097084 intron CG7900 + chr3R 8099781 intron CG7900 + chr3R_19_8095001 chr3R_8095001 RAL-913 3315 chr3R 8101713 8101734 chr3R 8104847 8104868 G2 9 3134 16.0 13.0 14.5 0.6 3155 chr3R 8101713 exon CG7900 + chr3R 8103290 intron CG7900 + chr3R 8104868 3` UTR CG7900 + chr3R_9_8100001 chr3R_8100001 RAL-913 3316 chr3R 8101737 8101783 chr3R 8104846 8104916 G2 16 3130 9.5 12.0 10.8 1.4 3179 chr3R 8101737 exon CG7900 + chr3R 8103326 intron CG7900 + chr3R 8104916 3` UTR CG7900 + chr3R_16_8100001 chr3R_8100001 RAL-913 3317 chr3R 8182611 8182667 chr3R 8182755 8182811 20 144 10.0 12.5 11.2 1.6 200 chr3R 8182611 intergenic not near genes chr3R 8182711 intergenic not near genes chr3R 8182811 intergenic not near genes chr3R_20_8180001 chr3R_8180001 RAL-913 3318 chr3R 8188338 8188524 chr3R 8188473 8188665 23 136 15.5 15.0 15.2 1.4 327 chr3R 8188338 intergenic not near genes chr3R 8188502 intergenic not near genes chr3R 8188665 intergenic not near genes chr3R_23_8185001 chr3R_8185001 RAL-913 3319 chr3R 8198856 8198922 chr3R 8199050 8199116 11 192 28.0 28.0 28.0 0.4 260 chr3R 8198856 intergenic not near genes chr3R 8198986 intergenic not near genes chr3R 8199116 intergenic not near genes chr3R_11_8195001 chr3R_8195001 RAL-913 3320 chr3R 8207508 8207584 chr3R 8208403 8208445 F-element 34 887 6.5 9.0 7.8 3.9 937 chr3R 8207508 intergenic not near genes chr3R 8207976 intergenic not near genes chr3R 8208445 intergenic not near genes chr3R_34_8205001 chr3R_8205001 RAL-913 3321 chr3R 8218436 8218500 chr3R 8218570 8218598 13 139 23.5 26.5 25.0 0.5 162 chr3R 8218436 exon CG7800 + chr3R 8218517 exon CG7800 + chr3R 8218598 exon CG7800 + chr3R_13_8215001 chr3R_8215001 RAL-913 3322 chr3R 8254417 8254484 chr3R 8254559 8254626 10 142 25.5 25.0 25.2 0.4 209 chr3R 8254417 intron mtg + chr3R 8254522 intron mtg + chr3R 8254626 intron mtg + chr3R_10_8250001 chr3R_8250001 RAL-913 3323 chr3R 8273695 8273751 chr3R 8273832 8273888 12 136 24.5 22.5 23.5 0.5 193 chr3R 8273695 intergenic not near genes chr3R 8273792 intergenic not near genes chr3R 8273888 intergenic not near genes chr3R_12_8270001 chr3R_8270001 RAL-913 3324 chr3R 8293963 8294019 chr3R 8294190 8294236 17 226 25.5 23.5 24.5 0.7 273 chr3R 8293963 3` UTR CG9626 - chr3R 8294100 3` UTR CG9626 - chr3R 8294236 exon CG9626 - chr3R_17_8290001 chr3R_8290001 RAL-913 3325 chr3R 8339246 8339247 chr3R 21907535 21907536 15 13568289 36.0 39.0 37.5 0.4 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_15_15120001 chr3R_15120001 RAL-913 3326 chr3R 8370607 8370639 chr3R 8370741 8370779 7 135 14.5 20.0 17.2 0.4 172 chr3R 8370607 intron CG45263 - chr3R 8370693 intron CG45263 - chr3R 8370779 intron CG45263 - chr3R_7_8370001 chr3R_8370001 RAL-913 3327 chr3R 8376379 8376445 chr3R 8376726 8376792 21 349 60.0 55.0 57.5 0.4 413 chr3R 8376379 intron CG45263 - chr3R 8376586 intron CG45263 - chr3R 8376792 intron CG45263 - chr3R_21_8375001 chr3R_8375001 RAL-913 3328 chr3R 8393537 8393598 chr3R 8393671 8393732 12 128 17.5 21.0 19.2 0.6 195 chr3R 8393537 intron CG45263 - chr3R 8393634 intron CG45263 - chr3R 8393732 intron CG45263 - chr3R_12_8390001 chr3R_8390001 RAL-913 3329 chr3R 8402967 8402973 chr3R 8412183 8412189 roo 4 9216 17.0 7.0 12.0 0.3 9222 chr3R 8402967 intron CG45263 - chr3R 8407578 intron CG45263 - chr3R 8412189 intron CG45263 - chr3R_4_8405001 chr3R_8405001 RAL-913 3330 chr3R 8402974 8403027 chr3R 8412181 8412243 roo 16 9215 7.5 7.0 7.2 2.0 9269 chr3R 8402974 intron CG45263 - chr3R 8407608 intron CG45263 - chr3R 8412243 intron CG45263 - chr3R_16_8405001 chr3R_8405001 RAL-913 3331 chr3R 8414270 8414310 chr3R 8414398 8414438 6 128 24.5 22.5 23.5 0.2 168 chr3R 8414270 intron CG45263 - chr3R 8414354 intron CG45263 - chr3R 8414438 intron CG45263 - chr3R_6_8410001 chr3R_8410001 RAL-913 3332 chr3R 8418633 8418695 chr3R 8418780 8418840 13 149 15.5 12.5 14.0 0.9 207 chr3R 8418633 intron CG45263 - chr3R 8418736 intron CG45263 - chr3R 8418840 intron CG45263 - chr3R_13_8415001 chr3R_8415001 RAL-913 3333 chr3R 8439486 8439511 chr3R 8439593 8439606 5 112 25.0 24.0 24.5 0.2 120 chr3R 8439486 intron CG45263 - chr3R 8439546 intron CG45263 - chr3R 8439606 intron CG45263 - chr3R_5_8435001 chr3R_8435001 RAL-913 3334 chr3R 8470114 8470128 chr3R 8470222 8470255 roo 5 123 25.5 20.0 22.8 0.2 141 chr3R 8470114 intron CG45263 - chr3R 8470184 intron CG45263 - chr3R 8470255 intron CG45263 - chr3R_5_8470001 chr3R_8470001 RAL-913 3335 chr3R 8541299 8541369 chr3R 8541430 8541472 21 127 18.0 15.0 16.5 1.2 173 chr3R 8541299 intergenic not near genes chr3R 8541386 intergenic not near genes chr3R 8541472 intergenic not near genes chr3R_21_8540001 chr3R_8540001 RAL-913 3336 chr3R 8570448 8570507 chr3R 8575134 8575192 HMS-Beagle 11 4683 5.0 11.5 8.2 1.2 4744 chr3R 8570448 intergenic not near genes chr3R 8572820 intergenic not near genes chr3R 8575192 intergenic not near genes chr3R_11_8570001 chr3R_8570001 RAL-913 3337 chr3R 8579047 8579110 chr3R 8579201 8579262 12 141 15.0 15.0 15.0 0.8 215 chr3R 8579047 intron 5-HT2B + chr3R 8579154 intron 5-HT2B + chr3R 8579262 intron 5-HT2B + chr3R_12_8575001 chr3R_8575001 RAL-913 3338 chr3R 8590031 8590094 chr3R 8590383 8590446 9 352 23.0 25.5 24.2 0.4 415 chr3R 8590031 intron 5-HT2B + chr3R 8590238 intron 5-HT2B + chr3R 8590446 intron 5-HT2B + chr3R_9_8590001 chr3R_8590001 RAL-913 3339 chr3R 8601728 8601795 chr3R 8610931 8610998 roo 29 9202 9.0 8.0 8.5 3.1 9270 chr3R 8601728 intron 5-HT2B + chr3R 8606363 intron 5-HT2B + chr3R 8610998 intron 5-HT2B + chr3R_29_8605001 chr3R_8605001 RAL-913 3340 chr3R 8617132 8617201 chr3R 8617268 8617337 13 136 26.5 26.5 26.5 0.5 205 chr3R 8617132 intron 5-HT2B + chr3R 8617234 intron 5-HT2B + chr3R 8617337 intron 5-HT2B + chr3R_13_8615001 chr3R_8615001 RAL-913 3341 chr3R 8636883 8636957 chr3R 8637236 8637307 25 351 23.0 25.5 24.2 1.0 424 chr3R 8636883 intergenic not near genes chr3R 8637095 intergenic not near genes chr3R 8637307 intergenic not near genes chr3R_25_8635001 chr3R_8635001 RAL-913 3342 chr3R 8707311 8707380 chr3R 8709803 8709871 jockey 17 2491 9.5 7.0 8.2 1.8 2560 chr3R 8707311 intergenic not near genes chr3R 8708591 intergenic not near genes chr3R 8709871 intergenic not near genes chr3R_17_8705001 chr3R_8705001 RAL-913 3343 chr3R 8725111 8725165 chr3R 8725247 8725301 8 136 29.5 33.0 31.2 0.2 190 chr3R 8725111 3` UTR CG8145 + chr3R 8725206 3` UTR CG8145 + chr3R 8725301 3` UTR CG8145 + chr3R_8_8725001 chr3R_8725001 RAL-913 3344 chr3R 8740196 8740272 chr3R 8740336 8740411 19 137 4.0 9.0 6.5 2.5 215 chr3R 8740196 intron CG9801 - chr3R 8740304 intron CG9801 - chr3R 8740411 intron CG9801 - chr3R_19_8740001 chr3R_8740001 RAL-913 3345 chr3R 8743155 8743211 chr3R 8743286 8743335 15 126 30.5 29.5 30.0 0.5 180 chr3R 8743155 intron CG9801 - chr3R 8743245 intron CG9801 - chr3R 8743335 intron CG9801 - chr3R_15_8740001 chr3R_8740001 RAL-913 3346 chr3R 8745702 8745772 chr3R 8745863 8745932 36 161 8.0 11.5 9.8 3.3 230 chr3R 8745702 intron CG9801 - chr3R 8745817 intron CG9801 - chr3R 8745932 intron CG9801 - chr3R_36_8745001 chr3R_8745001 RAL-913 3347 chr3R 8751592 8751658 chr3R 8751740 8751789 15 139 25.0 30.5 27.8 0.5 197 chr3R 8751592 intron,3` UTR,5` UTR CG8223 +,CG11768 -,CG34135 - chr3R 8751690 intron,3` UTR,5` UTR CG8223 +,CG11768 -,CG34135 - chr3R 8751789 intron,3` UTR,5` UTR CG8223 +,CG11768 -,CG34135 - chr3R_15_8750001 chr3R_8750001 RAL-913 3348 chr3R 8762488 8762555 chr3R 8762634 8762696 12 144 30.0 25.0 27.5 0.4 208 chr3R 8762488 intron,intron CG11768 -,CG34135 - chr3R 8762592 intron,intron CG11768 -,CG34135 - chr3R 8762696 intron,intron CG11768 -,CG34135 - chr3R_12_8760001 chr3R_8760001 RAL-913 3349 chr3R 8882013 8882086 chr3R 8882154 8882227 11 141 28.5 29.5 29.0 0.4 214 chr3R 8882013 intron pyd - chr3R 8882120 intron pyd - chr3R 8882227 intron pyd - chr3R_11_8880001 chr3R_8880001 RAL-913 3350 chr3R 8883271 8883329 chr3R 8883402 8883459 13 130 16.5 20.5 18.5 0.7 188 chr3R 8883271 intron pyd - chr3R 8883365 intron pyd - chr3R 8883459 intron pyd - chr3R_13_8880001 chr3R_8880001 RAL-913 3351 chr3R 8894828 8894893 chr3R 8896034 8896099 1360 29 1204 9.0 8.0 8.5 3.1 1271 chr3R 8894828 intron pyd - chr3R 8895464 intron pyd - chr3R 8896099 intron pyd - chr3R_29_8895001 chr3R_8895001 RAL-913 3352 chr3R 8898179 8898209 chr3R 8913803 8913831 297 8 15624 19.0 7.5 13.2 0.6 15652 chr3R 8898179 intron pyd - chr3R 8906005 intron pyd - chr3R 8913831 intron pyd - chr3R_8_8905001 chr3R_8905001 RAL-913 3353 chr3R 8917152 8917226 chr3R 8917279 8917354 12 127 25.5 24.0 24.8 0.5 202 chr3R 8917152 intron pyd - chr3R 8917253 intron pyd - chr3R 8917354 intron pyd - chr3R_12_8915001 chr3R_8915001 RAL-913 3354 chr3R 8960531 8960588 chr3R 8960658 8960714 16 127 19.5 17.5 18.5 0.8 183 chr3R 8960531 intron CG11966 - chr3R 8960622 intron CG11966 - chr3R 8960714 intron CG11966 - chr3R_16_8960001 chr3R_8960001 RAL-913 3355 chr3R 8979863 8979908 chr3R 8979996 8980041 7 133 29.5 32.5 31.0 0.2 178 chr3R 8979863 intergenic not near genes chr3R 8979952 intergenic not near genes chr3R 8980041 intergenic not near genes chr3R_7_8975001 chr3R_8975001 RAL-913 3356 chr3R 8997327 8997360 chr3R 8997467 8997500 11 139 35.5 20.5 28.0 0.4 173 chr3R 8997327 intron CG31100 - chr3R 8997414 intron CG31100 - chr3R 8997500 intron CG31100 - chr3R_11_8995001 chr3R_8995001 RAL-913 3357 chr3R 8997363 8997389 chr3R 8997464 8997529 10 136 25.0 19.0 22.0 0.4 166 chr3R 8997363 intron CG31100 - chr3R 8997446 intron CG31100 - chr3R 8997529 intron CG31100 - chr3R_10_8995001 chr3R_8995001 RAL-913 3358 chr3R 9036334 9036391 chr3R 9036462 9036519 16 128 20.5 22.5 21.5 0.7 185 chr3R 9036334 intron neur - chr3R 9036426 intron neur - chr3R 9036519 intron neur - chr3R_16_9035001 chr3R_9035001 RAL-913 3359 chr3R 9069443 9069510 chr3R 9069572 9069639 14 129 28.0 27.0 27.5 0.5 196 chr3R 9069443 3` UTR pum - chr3R 9069541 3` UTR pum - chr3R 9069639 3` UTR pum - chr3R_14_9065001 chr3R_9065001 RAL-913 3360 chr3R 9083095 9083098 chr3R 9083230 9083233 4 135 24.0 11.0 17.5 0.2 138 chr3R 9083095 intron pum - chr3R 9083164 intron pum - chr3R 9083233 intron pum - chr3R_4_9080001 chr3R_9080001 RAL-913 3361 chr3R 9083105 9083173 chr3R 9083226 9083273 29 130 6.0 10.5 8.2 3.2 168 chr3R 9083105 intron pum - chr3R 9083189 intron pum - chr3R 9083273 intron pum - chr3R_29_9080001 chr3R_9080001 RAL-913 3362 chr3R 9095250 9095307 chr3R 9095387 9095444 9 137 23.5 24.0 23.8 0.4 194 chr3R 9095250 intron pum - chr3R 9095347 intron pum - chr3R 9095444 intron pum - chr3R_9_9095001 chr3R_9095001 RAL-913 3363 chr3R 9099414 9099442 chr3R 9099547 9099576 7 134 16.5 17.0 16.8 0.4 162 chr3R 9099414 intron pum - chr3R 9099495 intron pum - chr3R 9099576 intron pum - chr3R_7_9095001 chr3R_9095001 RAL-913 3364 chr3R 9099449 9099482 chr3R 9099543 9099615 6 126 13.5 17.0 15.2 0.4 166 chr3R 9099449 intron pum - chr3R 9099532 intron pum - chr3R 9099615 intron pum - chr3R_6_9095001 chr3R_9095001 RAL-913 3365 chr3R 9101808 9101862 chr3R 9101956 9102010 37 148 7.5 13.0 10.2 3.3 202 chr3R 9101808 intron pum - chr3R 9101909 intron pum - chr3R 9102010 intron pum - chr3R_37_9100001 chr3R_9100001 RAL-913 3366 chr3R 9108817 9108880 chr3R 9108943 9109003 36 126 10.5 8.0 9.2 3.5 186 chr3R 9108817 intron pum - chr3R 9108910 intron pum - chr3R 9109003 intron pum - chr3R_36_9105001 chr3R_9105001 RAL-913 3367 chr3R 9141103 9141169 chr3R 9141235 9141290 10 132 24.0 37.0 30.5 0.3 187 chr3R 9141103 intron pum - chr3R 9141196 intron pum - chr3R 9141290 intron pum - chr3R_10_9140001 chr3R_9140001 RAL-913 3368 chr3R 9142768 9142817 chr3R 9142957 9142990 8 199 18.5 30.0 24.2 0.3 222 chr3R 9142768 intron pum - chr3R 9142879 intron pum - chr3R 9142990 intron pum - chr3R_8_9140001 chr3R_9140001 RAL-913 3369 chr3R 9149420 9149445 chr3R 9149534 9149552 7 124 23.0 9.5 16.2 0.4 132 chr3R 9149420 intron pum - chr3R 9149486 intron pum - chr3R 9149552 intron pum - chr3R_7_9145001 chr3R_9145001 RAL-913 3370 chr3R 9189933 9189983 chr3R 9190074 9190109 4 132 12.0 10.5 11.2 0.3 176 chr3R 9189933 intron pum - chr3R 9190021 intron pum - chr3R 9190109 intron pum - chr3R_4_9190001 chr3R_9190001 RAL-913 3371 chr3R 9192014 9192045 chr3R 9192149 9192180 6 135 14.0 18.5 16.2 0.3 166 chr3R 9192014 intron pum - chr3R 9192097 intron pum - chr3R 9192180 intron pum - chr3R_6_9190001 chr3R_9190001 RAL-913 3372 chr3R 9227216 9227256 chr3R 9227327 9227353 13 122 35.5 27.5 31.5 0.4 137 chr3R 9227216 intron pum - chr3R 9227284 intron pum - chr3R 9227353 intron pum - chr3R_13_9225001 chr3R_9225001 RAL-913 3373 chr3R 9278745 9278802 chr3R 9284055 9284112 Rt1a 25 5310 4.5 8.0 6.2 3.5 5367 chr3R 9278745 intergenic not near genes chr3R 9281428 intergenic not near genes chr3R 9284112 intergenic not near genes chr3R_25_9280001 chr3R_9280001 RAL-913 3374 chr3R 9284298 9284360 chr3R 9284445 9284507 14 145 25.0 26.5 25.8 0.5 209 chr3R 9284298 intergenic not near genes chr3R 9284402 intergenic not near genes chr3R 9284507 intergenic not near genes chr3R_14_9280001 chr3R_9280001 RAL-913 3375 chr3R 9319534 9319594 chr3R 9320019 9320079 jockey 33 483 12.5 10.0 11.2 2.7 545 chr3R 9319534 intron CG8861 - chr3R 9319806 intron CG8861 - chr3R 9320079 intron CG8861 - chr3R_33_9315001 chr3R_9315001 RAL-913 3376 chr3R 9361810 9361837 chr3R 9362099 9362128 pogo 10 291 12.5 18.0 15.2 0.6 318 chr3R 9361810 3` UTR CG45050 + chr3R 9361969 3` UTR CG45050 + chr3R 9362128 3` UTR CG45050 + chr3R_10_9360001 chr3R_9360001 RAL-913 3377 chr3R 9379127 9379171 chr3R 9379259 9379303 13 125 0.0 11.5 5.8 1.9 176 chr3R 9379127 intron FER - chr3R 9379215 intron FER - chr3R 9379303 intron FER - chr3R_13_9375001 chr3R_9375001 RAL-913 3378 chr3R 9379752 9379805 chr3R 9379897 9379949 6 144 29.5 32.0 30.8 0.2 197 chr3R 9379752 intron FER - chr3R 9379850 intron FER - chr3R 9379949 intron FER - chr3R_6_9375001 chr3R_9375001 RAL-913 3379 chr3R 9382785 9382813 chr3R 9382960 9382988 9 175 29.5 28.5 29.0 0.3 203 chr3R 9382785 intron FER - chr3R 9382886 intron FER - chr3R 9382988 intron FER - chr3R_9_9380001 chr3R_9380001 RAL-913 3380 chr3R 9382814 9382849 chr3R 9382950 9382998 6 162 25.0 25.0 25.0 0.2 184 chr3R 9382814 intron FER - chr3R 9382906 intron FER - chr3R 9382998 intron FER - chr3R_6_9380001 chr3R_9380001 RAL-913 3381 chr3R 9447435 9447461 chr3R 9447589 9447615 7 154 7.0 22.5 14.8 0.4 180 chr3R 9447435 intron ps + chr3R 9447525 intron ps + chr3R 9447615 intron ps + chr3R_7_9445001 chr3R_9445001 RAL-913 3382 chr3R 9464760 9464831 chr3R 9464898 9464914 19 134 33.0 31.5 32.2 0.6 154 chr3R 9464760 3` UTR CG16779 - chr3R 9464837 3` UTR CG16779 - chr3R 9464914 3` UTR CG16779 - chr3R_19_9460001 chr3R_9460001 RAL-913 3383 chr3R 9487976 9488039 chr3R 9488154 9488217 14 178 27.0 32.0 29.5 0.5 241 chr3R 9487976 intron CG16779 - chr3R 9488096 intron CG16779 - chr3R 9488217 intron CG16779 - chr3R_14_9485001 chr3R_9485001 RAL-913 3384 chr3R 9582246 9582300 chr3R 9582579 9582633 11 333 34.5 29.5 32.0 0.3 387 chr3R 9582246 intron CG8301 + chr3R 9582440 intron CG8301 + chr3R 9582633 intron,exon CG8301 +,CG33654 - chr3R_11_9580001 chr3R_9580001 RAL-913 3385 chr3R 9600534 9600583 chr3R 9600660 9600709 11 126 25.5 26.0 25.8 0.4 175 chr3R 9600534 intron CG8312 + chr3R 9600622 intron CG8312 + chr3R 9600709 intron CG8312 + chr3R_11_9600001 chr3R_9600001 RAL-913 3386 chr3R 9611829 9611862 chr3R 9611961 9611994 16 132 16.0 0.5 8.2 1.7 165 chr3R 9611829 intron CG8312 + chr3R 9611912 intron CG8312 + chr3R 9611994 intron CG8312 + chr3R_16_9610001 chr3R_9610001 RAL-913 3387 chr3R 9699929 9699999 chr3R 9700068 9700135 1360 6 138 22.5 27.0 24.8 0.2 206 chr3R 9699929 intron Unc-115a - chr3R 9700032 intron Unc-115a - chr3R 9700135 intron Unc-115a - chr3R_6_9700001 chr3R_9700001 RAL-913 3388 chr3R 9823865 9823895 chr3R 9823992 9824022 11 127 34.0 30.5 32.2 0.3 157 chr3R 9823865 intergenic CG34302 -,CR42858 - chr3R 9823944 intergenic CG34302 -,CR42858 - chr3R 9824022 intergenic CG34302 -,CR42858 - chr3R_11_9820001 chr3R_9820001 RAL-913 3389 chr3R 9829361 9829425 chr3R 9829496 9829560 12 134 13.5 17.0 15.2 0.7 199 chr3R 9829361 intron Teh1 - chr3R 9829460 intron Teh1 - chr3R 9829560 intron Teh1 - chr3R_12_9825001 chr3R_9825001 RAL-913 3390 chr3R 9836826 9836896 chr3R 9836964 9837034 13 138 26.0 22.5 24.2 0.5 208 chr3R 9836826 intron Teh1 - chr3R 9836930 intron Teh1 - chr3R 9837034 intron Teh1 - chr3R_13_9835001 chr3R_9835001 RAL-913 3391 chr3R 9857761 9857827 chr3R 9858251 9858317 20 488 22.5 20.5 21.5 0.9 556 chr3R 9857761 intron Teh1 - chr3R 9858039 intron Teh1 - chr3R 9858317 intron Teh1 - chr3R_20_9855001 chr3R_9855001 RAL-913 3392 chr3R 9863116 9863145 chr3R 9863249 9863278 5 133 26.0 27.5 26.8 0.2 162 chr3R 9863116 intron Teh1 - chr3R 9863197 intron Teh1 - chr3R 9863278 intron Teh1 - chr3R_5_9860001 chr3R_9860001 RAL-913 3393 chr3R 9920795 9920806 chr3R 9920942 9920953 5 147 23.5 29.5 26.5 0.2 158 chr3R 9920795 intron Glut4EF + chr3R 9920874 intron Glut4EF + chr3R 9920953 intron Glut4EF + chr3R_5_9920001 chr3R_9920001 RAL-913 3394 chr3R 9936855 9936910 chr3R 9936958 9937036 16 119 15.5 15.5 15.5 1.0 181 chr3R 9936855 intron Glut4EF + chr3R 9936946 intron Glut4EF + chr3R 9937036 intron Glut4EF + chr3R_16_9935001 chr3R_9935001 RAL-913 3395 chr3R 9967329 9967355 chr3R 9967459 9967485 4 128 26.0 29.5 27.8 0.1 156 chr3R 9967329 intron Glut4EF + chr3R 9967407 intron Glut4EF + chr3R 9967485 intron Glut4EF + chr3R_4_9965001 chr3R_9965001 RAL-913 3396 chr3R 10079836 10079891 chr3R 10079981 10080036 12 145 34.5 32.5 33.5 0.3 200 chr3R 10079836 intergenic not near genes chr3R 10079936 intergenic not near genes chr3R 10080036 intergenic not near genes chr3R_12_10075001 chr3R_10075001 RAL-913 3397 chr3R 10183052 10183083 chr3R 10183179 10183210 12 127 30.5 30.0 30.2 0.4 158 chr3R 10183052 intron CG12814 - chr3R 10183131 intron CG12814 - chr3R 10183210 intron CG12814 - chr3R_12_10180001 chr3R_10180001 RAL-913 3398 chr3R 10196907 10196927 chr3R 10202944 10202964 297 7 6034 15.0 10.0 12.5 0.5 6057 chr3R 10196907 exon Syn + chr3R 10199936 intron Syn + chr3R 10202964 intron Syn + chr3R_7_10195001 chr3R_10195001 RAL-913 3399 chr3R 10220951 10220981 chr3R 10221080 10221110 9 129 26.0 32.5 29.2 0.3 159 chr3R 10220951 3` UTR Syn + chr3R 10221030 3` UTR Syn + chr3R 10221110 3` UTR Syn + chr3R_9_10220001 chr3R_10220001 RAL-913 3400 chr3R 10231739 10231806 chr3R 10237366 10237433 mdg3 42 5627 13.0 9.0 11.0 3.5 5694 chr3R 10231739 intron CG42795 + chr3R 10234586 intron CG42795 + chr3R 10237433 intron CG42795 + chr3R_42_10230001 chr3R_10230001 RAL-913 3401 chr3R 10255340 10255386 chr3R 10260830 10260859 I-element 19 5486 13.0 14.0 13.5 1.3 5519 chr3R 10255340 intergenic Sirt6 -,CG3999 + chr3R 10258100 intron Sirt6 - chr3R 10260859 exon Sirt6 - chr3R_19_10255001 chr3R_10255001 RAL-913 3402 chr3R 10306960 10307032 chr3R 10312169 10312241 17 5209 50.5 58.5 54.5 0.3 5281 chr3R 10306960 exon CG43143 + chr3R 10309600 exon CG6293 - chr3R 10312241 3` UTR Bruce - chr3R_17_10305001 chr3R_10305001 RAL-913 3403 chr3R 10394039 10394089 chr3R 10394188 10394238 10 149 32.0 28.5 30.2 0.3 199 chr3R 10394039 intron cwo + chr3R 10394138 intron cwo + chr3R 10394238 intron cwo + chr3R_10_10390001 chr3R_10390001 RAL-913 3404 chr3R 10427372 10427438 chr3R 10427532 10427598 10 160 19.5 16.0 17.8 0.5 226 chr3R 10427372 intergenic not near genes chr3R 10427485 intergenic not near genes chr3R 10427598 intergenic not near genes chr3R_10_10425001 chr3R_10425001 RAL-913 3405 chr3R 10430633 10430697 chr3R 10430772 10430836 21 139 26.5 26.5 26.5 0.8 203 chr3R 10430633 intergenic not near genes chr3R 10430734 intergenic not near genes chr3R 10430836 intergenic not near genes chr3R_21_10430001 chr3R_10430001 RAL-913 3406 chr3R 10444153 10444210 chr3R 10444340 10444399 14 188 29.0 31.0 30.0 0.5 246 chr3R 10444153 intergenic not near genes chr3R 10444276 intergenic not near genes chr3R 10444399 intergenic not near genes chr3R_14_10440001 chr3R_10440001 RAL-913 3407 chr3R 10483632 10483700 chr3R 10484134 10484202 17 501 20.5 17.0 18.8 0.9 570 chr3R 10483632 intergenic not near genes chr3R 10483917 intergenic not near genes chr3R 10484202 intergenic not near genes chr3R_17_10480001 chr3R_10480001 RAL-913 3408 chr3R 10514303 10514366 chr3R 10514436 10514494 13 130 28.5 25.0 26.8 0.5 191 chr3R 10514303 exon hth - chr3R 10514398 intron hth - chr3R 10514494 intron hth - chr3R_13_10510001 chr3R_10510001 RAL-913 3409 chr3R 10526277 10526316 chr3R 10526590 10526628 12 308 22.5 21.5 22.0 0.5 351 chr3R 10526277 intron hth - chr3R 10526452 intron hth - chr3R 10526628 intron hth - chr3R_12_10525001 chr3R_10525001 RAL-913 3410 chr3R 10531831 10531868 chr3R 10531962 10531999 8 130 28.0 18.5 23.2 0.3 168 chr3R 10531831 intron hth - chr3R 10531915 intron hth - chr3R 10531999 intron hth - chr3R_8_10530001 chr3R_10530001 RAL-913 3411 chr3R 10535290 10535460 chr3R 10535433 10535606 15 144 26.0 25.0 25.5 0.6 316 chr3R 10535290 intron hth - chr3R 10535448 intron hth - chr3R 10535606 intron hth - chr3R_15_10535001 chr3R_10535001 RAL-913 3412 chr3R 10593428 10593456 chr3R 10593546 10593590 4 126 22.0 29.5 25.8 0.1 162 chr3R 10593428 intron hth - chr3R 10593509 intron hth - chr3R 10593590 exon hth - chr3R_4_10590001 chr3R_10590001 RAL-913 3413 chr3R 10596585 10596651 chr3R 10596699 10596740 9 110 17.0 15.5 16.2 0.5 155 chr3R 10596585 intron hth - chr3R 10596662 intron hth - chr3R 10596740 intron hth - chr3R_9_10595001 chr3R_10595001 RAL-913 3414 chr3R 10627588 10627624 chr3R 10627746 10627782 5 158 29.5 30.5 30.0 0.2 194 chr3R 10627588 intergenic not near genes chr3R 10627685 intergenic not near genes chr3R 10627782 intergenic not near genes chr3R_5_10625001 chr3R_10625001 RAL-913 3415 chr3R 10651770 10651819 chr3R 10651919 10651968 17 149 6.5 12.5 9.5 1.6 198 chr3R 10651770 intergenic not near genes chr3R 10651869 intergenic not near genes chr3R 10651968 intergenic not near genes chr3R_17_10650001 chr3R_10650001 RAL-913 3416 chr3R 10680778 10680837 chr3R 10681091 10681150 13 308 34.0 22.0 28.0 0.4 372 chr3R 10680778 5` UTR CG14688 - chr3R 10680964 intergenic CG14688 - chr3R 10681150 intergenic CG14688 - chr3R_13_10680001 chr3R_10680001 RAL-913 3417 chr3R 10720599 10720650 chr3R 10720733 10720784 7 134 22.5 25.0 23.8 0.3 185 chr3R 10720599 intergenic not near genes chr3R 10720692 intergenic not near genes chr3R 10720784 intergenic not near genes chr3R_7_10720001 chr3R_10720001 RAL-913 3418 chr3R 10723728 10723764 chr3R 10723864 10723876 12 138 23.5 14.5 19.0 0.6 148 chr3R 10723728 intergenic not near genes chr3R 10723802 intergenic not near genes chr3R 10723876 intergenic not near genes chr3R_12_10720001 chr3R_10720001 RAL-913 3419 chr3R 10727596 10727670 chr3R 10727726 10727800 15 128 19.5 23.0 21.2 0.7 204 chr3R 10727596 intergenic not near genes chr3R 10727698 intergenic not near genes chr3R 10727800 intergenic not near genes chr3R_15_10725001 chr3R_10725001 RAL-913 3420 chr3R 10732279 10732294 chr3R 10733201 10733216 8 922 26.0 18.5 22.2 0.3 937 chr3R 10732279 intergenic not near genes chr3R 10732748 intergenic not near genes chr3R 10733216 intergenic not near genes chr3R_8_10730001 chr3R_10730001 RAL-913 3421 chr3R 10732302 10732333 chr3R 10733198 10733255 9 919 23.0 16.5 19.8 0.4 953 chr3R 10732302 intergenic not near genes chr3R 10732778 intergenic not near genes chr3R 10733255 intergenic not near genes chr3R_9_10730001 chr3R_10730001 RAL-913 3422 chr3R 10742880 10742942 chr3R 10743160 10743222 8 280 27.0 24.5 25.8 0.3 342 chr3R 10742880 intron TkR86C - chr3R 10743051 intron TkR86C - chr3R 10743222 intron TkR86C - chr3R_8_10740001 chr3R_10740001 RAL-913 3423 chr3R 10752581 10752653 chr3R 10752717 10752789 19 136 21.5 20.5 21.0 0.9 208 chr3R 10752581 intergenic not near genes chr3R 10752685 intergenic not near genes chr3R 10752789 intergenic not near genes chr3R_19_10750001 chr3R_10750001 RAL-913 3424 chr3R 10757321 10757332 chr3R 10757448 10757480 4 143 27.0 24.5 25.8 0.1 159 chr3R 10757321 intron,intron CG31272 -,CR45015 + chr3R 10757400 intron,intron CG31272 -,CR45015 + chr3R 10757480 exon,5` UTR CG31272 -,CR45015 + chr3R_4_10755001 chr3R_10755001 RAL-913 3425 chr3R 10785771 10785824 chr3R 10785900 10785953 11 129 28.0 29.5 28.8 0.4 182 chr3R 10785771 intron Rbp1 + chr3R 10785862 intron Rbp1 + chr3R 10785953 intron Rbp1 + chr3R_11_10785001 chr3R_10785001 RAL-913 3426 chr3R 10804139 10804193 chr3R 10811721 10811775 17.6 8 7582 18.0 20.5 19.2 0.4 7636 chr3R 10804139 intergenic CG14692 - chr3R 10807957 intergenic not near genes chr3R 10811775 3` UTR CG14693 - chr3R_8_10805001 chr3R_10805001 RAL-913 3427 chr3R 10817175 10817240 chr3R 10817308 10817373 18 133 31.0 32.5 31.8 0.5 198 chr3R 10817175 3` UTR CG4089 + chr3R 10817274 3` UTR CG4089 + chr3R 10817373 3` UTR CG4089 + chr3R_18_10815001 chr3R_10815001 RAL-913 3428 chr3R 10868548 10868595 chr3R 10868676 10868705 10 122 12.5 8.0 10.2 0.9 157 chr3R 10868548 5` UTR SelR - chr3R 10868626 5` UTR SelR - chr3R 10868705 intergenic Tsp86D +,SelR - chr3R_10_10865001 chr3R_10865001 RAL-913 3429 chr3R 10868616 10868622 chr3R 10868669 10868733 4 81 8.5 7.0 7.8 0.5 117 chr3R 10868616 5` UTR SelR - chr3R 10868674 intergenic SelR -,Tsp86D + chr3R 10868733 5` UTR Tsp86D + chr3R_4_10865001 chr3R_10865001 RAL-913 3430 chr3R 10904864 10904936 chr3R 10905118 10905190 24 253 19.5 15.0 17.2 1.3 326 chr3R 10904864 intergenic not near genes chr3R 10905027 intergenic not near genes chr3R 10905190 intergenic not near genes chr3R_24_10905001 chr3R_10905001 RAL-913 3431 chr3R 10906786 10906845 chr3R 10906912 10906959 13 124 16.0 24.0 20.0 0.6 173 chr3R 10906786 intergenic not near genes chr3R 10906872 intergenic not near genes chr3R 10906959 intergenic not near genes chr3R_13_10905001 chr3R_10905001 RAL-913 3432 chr3R 10910946 10911019 chr3R 10911118 10911189 8 168 27.0 24.0 25.5 0.3 243 chr3R 10910946 intergenic not near genes chr3R 10911068 intergenic not near genes chr3R 10911189 intergenic not near genes chr3R_8_10910001 chr3R_10910001 RAL-913 3433 chr3R 10911413 10911483 chr3R 10911756 10911818 7 337 48.5 45.5 47.0 0.1 405 chr3R 10911413 intergenic not near genes chr3R 10911616 intergenic not near genes chr3R 10911818 intergenic not near genes chr3R_7_10910001 chr3R_10910001 RAL-913 3434 chr3R 10919640 10919714 chr3R 10919768 10919825 27 127 6.0 5.5 5.8 4.0 185 chr3R 10919640 intergenic not near genes chr3R 10919732 intergenic not near genes chr3R 10919825 intergenic not near genes chr3R_27_10915001 chr3R_10915001 RAL-913 3435 chr3R 10920003 10920070 chr3R 10920131 10920198 24 128 11.5 11.5 11.5 1.9 195 chr3R 10920003 intergenic not near genes chr3R 10920100 intergenic not near genes chr3R 10920198 intergenic not near genes chr3R_24_10920001 chr3R_10920001 RAL-913 3436 chr3R 10935723 10935778 chr3R 10935855 10935900 8 130 34.5 34.5 34.5 0.2 177 chr3R 10935723 intergenic not near genes chr3R 10935812 intergenic not near genes chr3R 10935900 intergenic not near genes chr3R_8_10935001 chr3R_10935001 RAL-913 3437 chr3R 10957817 10957884 chr3R 10963256 10963259 Rt1c 19 5425 6.0 4.5 5.2 3.1 5442 chr3R 10957817 intergenic not near genes chr3R 10960538 intergenic not near genes chr3R 10963259 intergenic not near genes chr3R_19_10960001 chr3R_10960001 RAL-913 3438 chr3R 10971447 10971514 chr3R 10971588 10971615 11 137 11.0 19.0 15.0 0.7 168 chr3R 10971447 intergenic not near genes chr3R 10971531 intergenic not near genes chr3R 10971615 intergenic not near genes chr3R_11_10970001 chr3R_10970001 RAL-913 3439 chr3R 10998424 10998468 chr3R 10998551 10998575 13 123 17.0 19.0 18.0 0.7 151 chr3R 10998424 intron CG34114 + chr3R 10998500 intron CG34114 + chr3R 10998575 intron CG34114 + chr3R_13_10995001 chr3R_10995001 RAL-913 3440 chr3R 11022216 11022267 chr3R 11022418 11022469 7 202 22.5 27.5 25.0 0.3 253 chr3R 11022216 intron CG34114 + chr3R 11022342 intron CG34114 + chr3R 11022469 intron CG34114 + chr3R_7_11020001 chr3R_11020001 RAL-913 3441 chr3R 11024158 11024198 chr3R 11024274 11024308 5 133 22.5 21.5 22.0 0.2 150 chr3R 11024158 intron CG34114 + chr3R 11024233 intron CG34114 + chr3R 11024308 intron CG34114 + chr3R_5_11020001 chr3R_11020001 RAL-913 3442 chr3R 11032225 11032299 chr3R 11032361 11032435 8 136 18.0 21.5 19.8 0.4 210 chr3R 11032225 intron CG34114 + chr3R 11032330 intron CG34114 + chr3R 11032435 intron CG34114 + chr3R_8_11030001 chr3R_11030001 RAL-913 3443 chr3R 11032895 11032954 chr3R 11033007 11033081 11 117 13.5 15.5 14.5 0.7 186 chr3R 11032895 intron CG34114 + chr3R 11032988 intron CG34114 + chr3R 11033081 intron CG34114 + chr3R_11_11030001 chr3R_11030001 RAL-913 3444 chr3R 11039390 11039455 chr3R 11039518 11039583 15 126 22.5 23.5 23.0 0.6 193 chr3R 11039390 intron CG34114 + chr3R 11039486 intron CG34114 + chr3R 11039583 intron CG34114 + chr3R_15_11035001 chr3R_11035001 RAL-913 3445 chr3R 11043058 11043112 chr3R 11043199 11043268 15 150 11.0 13.5 12.2 1.1 210 chr3R 11043058 intron CG34114 + chr3R 11043163 intron CG34114 + chr3R 11043268 intron CG34114 + chr3R_15_11040001 chr3R_11040001 RAL-913 3446 chr3R 11056845 11056890 chr3R 11056973 11057018 9 128 17.0 9.0 13.0 0.6 173 chr3R 11056845 intergenic not near genes chr3R 11056932 intergenic not near genes chr3R 11057018 intergenic not near genes chr3R_9_11055001 chr3R_11055001 RAL-913 3447 chr3R 11057358 11057400 chr3R 11057482 11057529 10 124 22.0 26.5 24.2 0.4 171 chr3R 11057358 intergenic not near genes chr3R 11057444 intergenic not near genes chr3R 11057529 intergenic not near genes chr3R_10_11055001 chr3R_11055001 RAL-913 3448 chr3R 11065541 11065609 chr3R 11071243 11071311 297 7 5702 5.0 4.0 4.5 1.3 5770 chr3R 11065541 intergenic not near genes chr3R 11068426 intergenic not near genes chr3R 11071311 intergenic not near genes chr3R_7_11065001 chr3R_11065001 RAL-913 3449 chr3R 11078903 11078962 chr3R 11079033 11079092 5 124 26.5 24.5 25.5 0.2 189 chr3R 11078903 intergenic not near genes chr3R 11078998 intergenic not near genes chr3R 11079092 intergenic not near genes chr3R_5_11075001 chr3R_11075001 RAL-913 3450 chr3R 11085410 11085482 chr3R 11085537 11085609 8 127 27.0 26.0 26.5 0.3 199 chr3R 11085410 3` UTR CR44940 - chr3R 11085510 intergenic CR44940 - chr3R 11085609 intergenic CR44940 - chr3R_8_11085001 chr3R_11085001 RAL-913 3451 chr3R 11087423 11087455 chr3R 11087512 11087581 6 120 10.0 12.0 11.0 0.5 158 chr3R 11087423 intergenic not near genes chr3R 11087502 intergenic not near genes chr3R 11087581 intergenic not near genes chr3R_6_11085001 chr3R_11085001 RAL-913 3452 chr3R 11099606 11099677 chr3R 11099788 11099857 21 180 16.5 13.5 15.0 1.3 251 chr3R 11099606 intergenic not near genes chr3R 11099732 intergenic not near genes chr3R 11099857 intergenic not near genes chr3R_21_11095001 chr3R_11095001 RAL-913 3453 chr3R 11102283 11102322 chr3R 11102411 11102433 8 127 16.0 7.5 11.8 0.6 150 chr3R 11102283 intergenic not near genes chr3R 11102358 intergenic not near genes chr3R 11102433 intergenic not near genes chr3R_8_11100001 chr3R_11100001 RAL-913 3454 chr3R 11104023 11104079 chr3R 11104188 11104244 15 163 23.5 29.5 26.5 0.5 221 chr3R 11104023 intergenic not near genes chr3R 11104134 intergenic not near genes chr3R 11104244 intergenic not near genes chr3R_15_11100001 chr3R_11100001 RAL-913 3455 chr3R 11123369 11123373 chr3R 11123492 11123501 5 127 25.5 26.5 26.0 0.2 132 chr3R 11123369 intergenic not near genes chr3R 11123435 intergenic not near genes chr3R 11123501 intergenic not near genes chr3R_5_11120001 chr3R_11120001 RAL-913 3456 chr3R 11149148 11149203 chr3R 11149290 11149360 7 153 25.5 22.0 23.8 0.3 212 chr3R 11149148 intergenic not near genes chr3R 11149254 intergenic not near genes chr3R 11149360 intergenic not near genes chr3R_7_11145001 chr3R_11145001 RAL-913 3457 chr3R 11151074 11151148 chr3R 11151319 11151376 18 240 14.5 12.0 13.2 1.3 302 chr3R 11151074 3` UTR Ugt86Di - chr3R 11151225 3` UTR Ugt86Di - chr3R 11151376 3` UTR Ugt86Di - chr3R_18_11150001 chr3R_11150001 RAL-913 3458 chr3R 11153416 11153476 chr3R 11153545 11153605 12 129 28.5 31.0 29.8 0.4 189 chr3R 11153416 exon Ugt86Di - chr3R 11153510 intron Ugt86Di - chr3R 11153605 exon Ugt86Di - chr3R_12_11150001 chr3R_11150001 RAL-913 3459 chr3R 11174543 11174612 chr3R 11175307 11175364 7 761 36.5 37.0 36.8 0.2 821 chr3R 11174543 exon Ugt86Dj - chr3R 11174954 intron Ugt86Dj - chr3R 11175364 exon Ugt86Dj - chr3R_7_11170001 chr3R_11170001 RAL-913 3460 chr3R 11197942 11198006 chr3R 11198091 11198155 18 149 16.5 16.5 16.5 1.0 213 chr3R 11197942 intron cu + chr3R 11198048 intron cu + chr3R 11198155 intron cu + chr3R_18_11195001 chr3R_11195001 RAL-913 3461 chr3R 11211784 11211852 chr3R 11211923 11211991 16 138 23.5 23.5 23.5 0.7 207 chr3R 11211784 intergenic not near genes chr3R 11211888 intergenic ZnT86D - chr3R 11211991 intergenic ZnT86D - chr3R_16_11210001 chr3R_11210001 RAL-913 3462 chr3R 11220236 11220302 chr3R 11220405 11220471 23 169 22.5 16.5 19.5 1.1 235 chr3R 11220236 intergenic CG6693 -,CG6689 - chr3R 11220354 3` UTR CG6693 - chr3R 11220471 3` UTR CG6693 - chr3R_23_11220001 chr3R_11220001 RAL-913 3463 chr3R 11247195 11247228 chr3R 11247326 11247359 INE-1 16 131 17.0 5.0 11.0 1.3 164 chr3R 11247195 intergenic CG5214 +,CR43283 - chr3R 11247277 intergenic CR43283 -,CG5214 + chr3R 11247359 intergenic CR43283 -,CG5214 + chr3R_16_11245001 chr3R_11245001 RAL-913 3464 chr3R 11249154 11249178 chr3R 11249293 11249300 4 135 18.0 16.5 17.2 0.2 146 chr3R 11249154 3` UTR CR43283 - chr3R 11249227 3` UTR CR43283 - chr3R 11249300 3` UTR CR43283 - chr3R_4_11245001 chr3R_11245001 RAL-913 3465 chr3R 11263405 11263414 chr3R 11263539 11263548 7 134 23.0 25.0 24.0 0.3 143 chr3R 11263405 intergenic not near genes chr3R 11263476 intergenic not near genes chr3R 11263548 intergenic not near genes chr3R_7_11260001 chr3R_11260001 RAL-913 3466 chr3R 11285011 11285056 chr3R 11285122 11285122 4 107 19.0 16.5 17.8 0.2 111 chr3R 11285011 intron CR31386 - chr3R 11285066 intron CR31386 - chr3R 11285122 intron CR31386 - chr3R_4_11285001 chr3R_11285001 RAL-913 3467 chr3R 11289577 11289611 chr3R 11289936 11289970 5 359 25.0 17.0 21.0 0.2 393 chr3R 11289577 intron CR31386 - chr3R 11289774 intron CR31386 - chr3R 11289970 intron CR31386 - chr3R_5_11285001 chr3R_11285001 RAL-913 3468 chr3R 11289615 11289647 chr3R 11289930 11290006 7 353 23.5 16.0 19.8 0.3 391 chr3R 11289615 intron CR31386 - chr3R 11289810 intron CR31386 - chr3R 11290006 intron CR31386 - chr3R_7_11285001 chr3R_11285001 RAL-913 3469 chr3R 11295955 11296013 chr3R 11296081 11296149 14 134 22.5 22.0 22.2 0.6 194 chr3R 11295955 intron CR31386 - chr3R 11296052 intron CR31386 - chr3R 11296149 intron CR31386 - chr3R_14_11295001 chr3R_11295001 RAL-913 3470 chr3R 11307173 11307219 chr3R 11307285 11307356 9 123 12.5 18.0 15.2 0.6 183 chr3R 11307173 intergenic not near genes chr3R 11307264 intergenic not near genes chr3R 11307356 intergenic not near genes chr3R_9_11305001 chr3R_11305001 RAL-913 3471 chr3R 11325313 11325326 chr3R 11325458 11325459 4 142 18.5 24.5 21.5 0.2 146 chr3R 11325313 intergenic not near genes chr3R 11325386 intergenic not near genes chr3R 11325459 intergenic not near genes chr3R_4_11325001 chr3R_11325001 RAL-913 3472 chr3R 11325332 11325353 chr3R 11325447 11325485 4 121 17.0 23.5 20.2 0.2 153 chr3R 11325332 intergenic not near genes chr3R 11325408 intergenic not near genes chr3R 11325485 intergenic not near genes chr3R_4_11325001 chr3R_11325001 RAL-913 3473 chr3R 11342507 11342565 chr3R 11342633 11342691 19 126 23.0 23.0 23.0 0.8 184 chr3R 11342507 intron pros + chr3R 11342599 intron pros + chr3R 11342691 intron pros + chr3R_19_11340001 chr3R_11340001 RAL-913 3474 chr3R 11379193 11379269 chr3R 11388398 11388433 roo 19 9203 7.0 10.5 8.8 1.9 9240 chr3R 11379193 intron pros + chr3R 11383813 intron pros + chr3R 11388433 intron pros + chr3R_19_11380001 chr3R_11380001 RAL-913 3475 chr3R 11404909 11404969 chr3R 11405039 11405099 12 128 18.5 18.0 18.2 0.6 190 chr3R 11404909 3` UTR pros + chr3R 11405004 3` UTR pros + chr3R 11405099 3` UTR pros + chr3R_12_11405001 chr3R_11405001 RAL-913 3476 chr3R 11406243 11406313 chr3R 11406370 11406440 16 127 27.5 26.0 26.8 0.6 197 chr3R 11406243 3` UTR pros + chr3R 11406342 3` UTR pros + chr3R 11406440 3` UTR pros + chr3R_16_11405001 chr3R_11405001 RAL-913 3477 chr3R 11442329 11442363 chr3R 11442542 11442598 15 230 20.0 23.5 21.8 0.7 269 chr3R 11442329 intron,intron sals -,CG17230 + chr3R 11442464 intron,intron sals -,CG17230 + chr3R 11442598 intron,intron sals -,CG17230 + chr3R_15_11440001 chr3R_11440001 RAL-913 3478 chr3R 11455538 11455596 chr3R 11455714 11455772 15 176 24.0 22.5 23.2 0.6 234 chr3R 11455538 intron,intron CG17230 +,PGRP-LB - chr3R 11455655 intron,intron CG17230 +,PGRP-LB - chr3R 11455772 intron,intron CG17230 +,PGRP-LB - chr3R_15_11455001 chr3R_11455001 RAL-913 3479 chr3R 11461229 11461290 chr3R 11461359 11461420 8 130 12.5 17.5 15.0 0.5 191 chr3R 11461229 intron CG17230 + chr3R 11461324 intron CG17230 + chr3R 11461420 intron CG17230 + chr3R_8_11460001 chr3R_11460001 RAL-913 3480 chr3R 11476911 11476971 chr3R 11477063 11477118 10 152 11.0 13.0 12.0 0.8 207 chr3R 11476911 intergenic not near genes chr3R 11477014 intergenic not near genes chr3R 11477118 intergenic not near genes chr3R_10_11475001 chr3R_11475001 RAL-913 3481 chr3R 11483414 11483480 chr3R 11483538 11483606 8 122 23.5 27.0 25.2 0.3 192 chr3R 11483414 intergenic not near genes chr3R 11483510 intergenic not near genes chr3R 11483606 intergenic not near genes chr3R_8_11480001 chr3R_11480001 RAL-913 3482 chr3R 11496300 11496345 chr3R 11496422 11496473 10 126 21.5 17.0 19.2 0.5 173 chr3R 11496300 intergenic not near genes chr3R 11496386 intergenic not near genes chr3R 11496473 intergenic not near genes chr3R_10_11495001 chr3R_11495001 RAL-913 3483 chr3R 11518774 11518841 chr3R 11518915 11518982 25 138 11.5 9.5 10.5 2.2 208 chr3R 11518774 intergenic not near genes chr3R 11518878 intergenic not near genes chr3R 11518982 intergenic not near genes chr3R_25_11515001 chr3R_11515001 RAL-913 3484 chr3R 11537454 11537512 chr3R 11537586 11537644 6 132 32.0 27.0 29.5 0.2 190 chr3R 11537454 intron dpr4 - chr3R 11537549 intron dpr4 - chr3R 11537644 intron dpr4 - chr3R_6_11535001 chr3R_11535001 RAL-913 3485 chr3R 11545833 11545894 chr3R 11546000 11546061 11 167 25.0 33.0 29.0 0.4 228 chr3R 11545833 intergenic not near genes chr3R 11545947 intergenic not near genes chr3R 11546061 intergenic not near genes chr3R_11_11545001 chr3R_11545001 RAL-913 3486 chr3R 11571779 11571843 chr3R 11571920 11571989 19 145 26.0 30.5 28.2 0.7 210 chr3R 11571779 exon Mrp4 + chr3R 11571884 intron Mrp4 + chr3R 11571989 intron Mrp4 + chr3R_19_11570001 chr3R_11570001 RAL-913 3487 chr3R 11583535 11583611 chr3R 11583662 11583738 16 126 26.0 26.0 26.0 0.6 203 chr3R 11583535 exon wkd + chr3R 11583636 intron wkd + chr3R 11583738 exon wkd + chr3R_16_11580001 chr3R_11580001 RAL-913 3488 chr3R 11664742 11664810 chr3R 11664884 11664952 21 142 13.0 15.5 14.2 1.4 210 chr3R 11664742 intron CG42327 + chr3R 11664847 intron CG42327 + chr3R 11664952 intron CG42327 + chr3R_21_11660001 chr3R_11660001 RAL-913 3489 chr3R 11694681 11694750 chr3R 11694824 11694882 31 141 7.5 4.5 6.0 4.4 201 chr3R 11694681 intergenic Fer3 - chr3R 11694782 intergenic Fer3 - chr3R 11694882 intergenic not near genes chr3R_31_11690001 chr3R_11690001 RAL-913 3490 chr3R 11708588 11708660 chr3R 11708846 11708918 13 258 16.5 4.5 10.5 1.1 330 chr3R 11708588 intergenic not near genes chr3R 11708753 intergenic not near genes chr3R 11708918 intergenic not near genes chr3R_13_11705001 chr3R_11705001 RAL-913 3491 chr3R 11710167 11710222 chr3R 11710295 11710350 12 125 22.5 21.0 21.8 0.5 183 chr3R 11710167 intergenic not near genes chr3R 11710258 intergenic not near genes chr3R 11710350 intergenic not near genes chr3R_12_11710001 chr3R_11710001 RAL-913 3492 chr3R 11712639 11712664 chr3R 11712805 11712830 4 166 35.0 30.0 32.5 0.1 191 chr3R 11712639 intergenic CG14720 + chr3R 11712734 intergenic CG14720 + chr3R 11712830 intergenic CG14720 + chr3R_4_11710001 chr3R_11710001 RAL-913 3493 chr3R 11712672 11712698 chr3R 11712801 11712864 4 153 29.0 29.5 29.2 0.1 192 chr3R 11712672 intergenic CG14720 + chr3R 11712768 intergenic CG14720 + chr3R 11712864 intergenic CG14720 + chr3R_4_11710001 chr3R_11710001 RAL-913 3494 chr3R 11733930 11734190 chr3R 11734175 11734358 27 192 18.0 18.0 18.0 1.4 428 chr3R 11733930 intergenic not near genes chr3R 11734144 intergenic not near genes chr3R 11734358 intergenic not near genes chr3R_27_11730001 chr3R_11730001 RAL-913 3495 chr3R 11740442 11740509 chr3R 11743499 11743566 41 3059 71.0 72.0 71.5 0.6 3124 chr3R 11740442 exon Blm - chr3R 11742004 5` UTR CG14722 + chr3R 11743566 exon CG14722 + chr3R_41_11740001 chr3R_11740001 RAL-913 3496 chr3R 11808051 11808102 chr3R 11808180 11808231 10 129 23.5 24.0 23.8 0.4 180 chr3R 11808051 intron ClC-a - chr3R 11808141 intron ClC-a - chr3R 11808231 intron ClC-a - chr3R_10_11805001 chr3R_11805001 RAL-913 3497 chr3R 11830314 11830352 chr3R 11830447 11830486 11 134 22.0 23.0 22.5 0.5 172 chr3R 11830314 intron CG6959 - chr3R 11830400 intron CG6959 - chr3R 11830486 intron CG6959 - chr3R_11_11830001 chr3R_11830001 RAL-913 3498 chr3R 11830925 11831002 chr3R 11831119 11831185 16 190 0.0 5.0 2.5 4.6 260 chr3R 11830925 intron CG6959 - chr3R 11831055 intron CG6959 - chr3R 11831185 intron CG6959 - chr3R_16_11830001 chr3R_11830001 RAL-913 3499 chr3R 11841022 11841091 chr3R 11846262 11846302 BS 16 5238 6.5 13.0 9.8 1.5 5280 chr3R 11841022 intron CG6959 - chr3R 11843662 intron CG6959 - chr3R 11846302 intron CG6959 - chr3R_16_11840001 chr3R_11840001 RAL-913 3500 chr3R 11850288 11850342 chr3R 11850417 11850471 17 125 25.5 29.5 27.5 0.6 183 chr3R 11850288 intron CG6959 - chr3R 11850380 intron CG6959 - chr3R 11850471 intron CG6959 - chr3R_17_11850001 chr3R_11850001 RAL-913 3501 chr3R 11853405 11853463 chr3R 11853604 11853660 18 198 19.5 24.5 22.0 0.8 255 chr3R 11853405 intron CG6959 - chr3R 11853532 intron CG6959 - chr3R 11853660 intron CG6959 - chr3R_18_11850001 chr3R_11850001 RAL-913 3502 chr3R 11853728 11853793 chr3R 11853883 11853948 21 155 30.0 25.5 27.8 0.7 220 chr3R 11853728 intron CG6959 - chr3R 11853838 intron CG6959 - chr3R 11853948 intron CG6959 - chr3R_21_11850001 chr3R_11850001 RAL-913 3503 chr3R 11865797 11865836 chr3R 11865946 11865985 9 149 33.0 24.5 28.8 0.3 188 chr3R 11865797 intron CG6959 - chr3R 11865891 intron CG6959 - chr3R 11865985 intron CG6959 - chr3R_9_11865001 chr3R_11865001 RAL-913 3504 chr3R 11874098 11874169 chr3R 11874268 11874339 8 170 21.0 28.0 24.5 0.3 241 chr3R 11874098 intergenic not near genes chr3R 11874218 intergenic not near genes chr3R 11874339 intergenic not near genes chr3R_8_11870001 chr3R_11870001 RAL-913 3505 chr3R 11905617 11905654 chr3R 21907534 21907536 5 10001903 25.5 38.5 32.0 0.2 10001919 chr3R 11905617 intron Cad87A - chr3R 16906576 intron iab-8 - chr3R 21907536 intergenic CG6678 + chr3R_5_16905001 chr3R_16905001 RAL-913 3506 chr3R 11914348 11914387 chr3R 11914483 11914522 10 135 25.0 24.0 24.5 0.4 174 chr3R 11914348 intron Cad87A - chr3R 11914435 intron Cad87A - chr3R 11914522 intron Cad87A - chr3R_10_11910001 chr3R_11910001 RAL-913 3507 chr3R 11919282 11919324 chr3R 11919393 11919462 7 131 29.0 28.5 28.8 0.2 180 chr3R 11919282 intron Cad87A - chr3R 11919372 intron Cad87A - chr3R 11919462 intron Cad87A - chr3R_7_11915001 chr3R_11915001 RAL-913 3508 chr3R 11937805 11937860 chr3R 11937948 11937986 5 133 20.5 23.5 22.0 0.2 181 chr3R 11937805 intron Cad87A - chr3R 11937896 intron Cad87A - chr3R 11937986 intron Cad87A - chr3R_5_11935001 chr3R_11935001 RAL-913 3509 chr3R 11950207 11950249 chr3R 11950326 11950388 6 116 17.0 16.0 16.5 0.3 181 chr3R 11950207 exon CG31211 + chr3R 11950298 exon CG31211 + chr3R 11950388 intron CG31211 + chr3R_6_11950001 chr3R_11950001 RAL-913 3510 chr3R 11957806 11957881 chr3R 11958139 11958214 S-element 22 332 8.5 2.5 5.5 3.4 408 chr3R 11957806 intergenic not near genes chr3R 11958010 intergenic not near genes chr3R 11958214 intergenic not near genes chr3R_22_11955001 chr3R_11955001 RAL-913 3511 chr3R 11998916 11998961 chr3R 11999081 11999126 12 165 27.0 32.5 29.8 0.4 210 chr3R 11998916 intron Tk - chr3R 11999021 intron Tk - chr3R 11999126 intron Tk - chr3R_12_11995001 chr3R_11995001 RAL-913 3512 chr3R 12016994 12017020 chr3R 12017121 12017147 7 125 10.0 18.0 14.0 0.5 153 chr3R 12016994 5` UTR CG3313 - chr3R 12017070 intergenic CG3313 -,Spt3 + chr3R 12017147 intergenic Spt3 +,CG3313 - chr3R_7_12015001 chr3R_12015001 RAL-913 3513 chr3R 12022837 12022908 chr3R 12025064 12025135 pogo 31 2226 9.5 8.0 8.8 3.2 2298 chr3R 12022837 intergenic not near genes chr3R 12023986 intergenic not near genes chr3R 12025135 intergenic not near genes chr3R_31_12020001 chr3R_12020001 RAL-913 3514 chr3R 12035684 12035695 chr3R 12035982 12035993 4 298 29.5 21.0 25.2 0.2 309 chr3R 12035684 intergenic ssp5 + chr3R 12035838 intergenic ssp5 + chr3R 12035993 intergenic ssp5 + chr3R_4_12035001 chr3R_12035001 RAL-913 3515 chr3R 12045124 12045201 chr3R 12045250 12045327 37 124 9.0 13.5 11.2 3.0 203 chr3R 12045124 intergenic not near genes chr3R 12045226 intergenic not near genes chr3R 12045327 intergenic not near genes chr3R_37_12045001 chr3R_12045001 RAL-913 3516 chr3R 12052362 12052400 chr3R 12052489 12052526 10 121 17.5 17.5 17.5 0.5 164 chr3R 12052362 intergenic not near genes chr3R 12052444 intergenic not near genes chr3R 12052526 intergenic not near genes chr3R_10_12050001 chr3R_12050001 RAL-913 3517 chr3R 12081983 12082009 chr3R 12082089 12082135 4 118 17.0 13.5 15.2 0.2 152 chr3R 12081983 intron CG14741 - chr3R 12082059 intron CG14741 - chr3R 12082135 intron CG14741 - chr3R_4_12080001 chr3R_12080001 RAL-913 3518 chr3R 12090946 12090974 chr3R 12091072 12091100 4 126 16.0 16.0 16.0 0.2 154 chr3R 12090946 intergenic CG14741 - chr3R 12091023 intergenic CG14741 - chr3R 12091100 intergenic CG14741 - chr3R_4_12090001 chr3R_12090001 RAL-913 3519 chr3R 12101469 12101476 chr3R 12101578 12101601 4 122 26.0 24.0 25.0 0.2 132 chr3R 12101469 intron dpr17 + chr3R 12101535 intron dpr17 + chr3R 12101601 intron dpr17 + chr3R_4_12100001 chr3R_12100001 RAL-913 3520 chr3R 12101481 12101527 chr3R 12101608 12101621 9 123 22.5 25.0 23.8 0.4 140 chr3R 12101481 intron dpr17 + chr3R 12101551 intron dpr17 + chr3R 12101621 intron dpr17 + chr3R_9_12100001 chr3R_12100001 RAL-913 3521 chr3R 12102828 12102850 chr3R 12102979 12103001 7 151 19.5 8.0 13.8 0.5 173 chr3R 12102828 intron dpr17 + chr3R 12102914 intron dpr17 + chr3R 12103001 intron dpr17 + chr3R_7_12100001 chr3R_12100001 RAL-913 3522 chr3R 12111834 12111920 chr3R 12111969 12112014 18 130 16.0 17.5 16.8 1.0 180 chr3R 12111834 intergenic dpr17 + chr3R 12111924 intergenic not near genes chr3R 12112014 intergenic not near genes chr3R_18_12110001 chr3R_12110001 RAL-913 3523 chr3R 12134911 12134979 chr3R 12135099 12135187 18 191 18.0 9.5 13.8 1.2 276 chr3R 12134911 intergenic not near genes chr3R 12135049 intergenic not near genes chr3R 12135187 intergenic not near genes chr3R_18_12135001 chr3R_12135001 RAL-913 3524 chr3R 12154038 12154073 chr3R 12154440 12154488 11 392 48.5 31.5 40.0 0.3 450 chr3R 12154038 intron dpr15 - chr3R 12154263 intron dpr15 - chr3R 12154488 intron dpr15 - chr3R_11_12150001 chr3R_12150001 RAL-913 3525 chr3R 12169188 12169222 chr3R 12169316 12169350 9 128 33.0 19.5 26.2 0.3 162 chr3R 12169188 intergenic not near genes chr3R 12169269 intergenic not near genes chr3R 12169350 intergenic not near genes chr3R_9_12165001 chr3R_12165001 RAL-913 3526 chr3R 12174967 12175012 chr3R 12175382 12175422 13 412 19.0 21.5 20.2 0.6 455 chr3R 12174967 intergenic not near genes chr3R 12175194 intergenic not near genes chr3R 12175422 intergenic not near genes chr3R_13_12175001 chr3R_12175001 RAL-913 3527 chr3R 12175013 12175039 chr3R 12175376 12175454 7 405 15.0 21.5 18.2 0.4 441 chr3R 12175013 intergenic not near genes chr3R 12175234 intergenic not near genes chr3R 12175454 intergenic not near genes chr3R_7_12175001 chr3R_12175001 RAL-913 3528 chr3R 12202225 12202320 chr3R 12202395 12202467 18 162 14.0 21.5 17.8 1.0 242 chr3R 12202225 intergenic not near genes chr3R 12202346 intergenic not near genes chr3R 12202467 intergenic not near genes chr3R_18_12200001 chr3R_12200001 RAL-913 3529 chr3R 12211610 12211672 chr3R 12211743 12211805 8 130 26.0 23.0 24.5 0.3 195 chr3R 12211610 intergenic not near genes chr3R 12211708 intergenic not near genes chr3R 12211805 intergenic not near genes chr3R_8_12210001 chr3R_12210001 RAL-913 3530 chr3R 12265663 12265720 chr3R 12265790 12265847 12 126 28.5 26.0 27.2 0.4 184 chr3R 12265663 intron svp + chr3R 12265755 intron svp + chr3R 12265847 intron svp + chr3R_12_12265001 chr3R_12265001 RAL-913 3531 chr3R 12267811 12267882 chr3R 12267941 12268012 31 130 14.5 12.5 13.5 2.1 201 chr3R 12267811 intron svp + chr3R 12267912 intron svp + chr3R 12268012 intron svp + chr3R_31_12265001 chr3R_12265001 RAL-913 3532 chr3R 12311519 12311582 chr3R 12311655 12311711 9 132 13.0 22.5 17.8 0.5 192 chr3R 12311519 exon CG4066 + chr3R 12311615 exon CG4066 + chr3R 12311711 exon CG4066 + chr3R_9_12310001 chr3R_12310001 RAL-913 3533 chr3R 12321927 12321991 chr3R 12322057 12322121 17 127 15.5 19.5 17.5 0.9 194 chr3R 12321927 intergenic not near genes chr3R 12322024 intergenic not near genes chr3R 12322121 intergenic not near genes chr3R_17_12320001 chr3R_12320001 RAL-913 3534 chr3R 12333753 12333828 chr3R 12333899 12333974 9 144 20.0 25.5 22.8 0.4 221 chr3R 12333753 intergenic not near genes chr3R 12333864 intergenic not near genes chr3R 12333974 intergenic not near genes chr3R_9_12330001 chr3R_12330001 RAL-913 3535 chr3R 12376344 12376416 chr3R 12376480 12376552 11 136 27.0 27.5 27.2 0.4 208 chr3R 12376344 exon GstD5 + chr3R 12376448 3` UTR GstD5 + chr3R 12376552 3` UTR GstD5 + chr3R_11_12375001 chr3R_12375001 RAL-913 3536 chr3R 12378782 12378798 chr3R 12381020 12381049 9 2236 28.0 33.5 30.8 0.3 2267 chr3R 12378782 exon GstD7 + chr3R 12379916 intergenic GstD8 + chr3R 12381049 3` UTR CG10035 - chr3R_9_12375001 chr3R_12375001 RAL-913 3537 chr3R 12378767 12378833 chr3R 12381051 12381065 6 2249 30.0 35.0 32.5 0.2 2298 chr3R 12378767 exon GstD7 + chr3R 12379916 intergenic GstD8 + chr3R 12381065 3` UTR CG10035 - chr3R_6_12375001 chr3R_12375001 RAL-913 3538 chr3R 12383830 12383833 chr3R 12383979 12383982 4 149 8.5 31.5 20.0 0.2 152 chr3R 12383830 intron GstD11 + chr3R 12383906 intron GstD11 + chr3R 12383982 intron GstD11 + chr3R_4_12380001 chr3R_12380001 RAL-913 3539 chr3R 12392850 12392899 chr3R 12392994 12393042 20 145 5.0 15.5 10.2 1.8 192 chr3R 12392850 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12392946 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393042 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_20_12390001 chr3R_12390001 RAL-913 3540 chr3R 12441039 12441084 chr3R 12441170 12441215 9 129 33.5 33.5 33.5 0.3 176 chr3R 12441039 intron Desat1 + chr3R 12441127 intron Desat1 + chr3R 12441215 intron Desat1 + chr3R_9_12440001 chr3R_12440001 RAL-913 3541 chr3R 12445183 12445425 chr3R 12445314 12445597 9 134 33.0 30.0 31.5 0.3 414 chr3R 12445183 intron Desat1 + chr3R 12445390 intron Desat1 + chr3R 12445597 intron Desat1 + chr3R_9_12445001 chr3R_12445001 RAL-913 3542 chr3R 12516020 12516080 chr3R 12516165 12516225 24 145 11.0 11.0 11.0 2.0 205 chr3R 12516020 intron Octbeta3R - chr3R 12516122 intron Octbeta3R - chr3R 12516225 intron Octbeta3R - chr3R_24_12515001 chr3R_12515001 RAL-913 3543 chr3R 12522326 12522386 chr3R 12522439 12522457 8 120 34.5 32.0 33.2 0.2 131 chr3R 12522326 5` UTR Octbeta3R - chr3R 12522392 5` UTR Octbeta3R - chr3R 12522457 5` UTR Octbeta3R - chr3R_8_12520001 chr3R_12520001 RAL-913 3544 chr3R 12568415 12568463 chr3R 12568541 12568589 5 126 22.0 27.0 24.5 0.2 174 chr3R 12568415 intron Octbeta2R - chr3R 12568502 intron Octbeta2R - chr3R 12568589 intron Octbeta2R - chr3R_5_12565001 chr3R_12565001 RAL-913 3545 chr3R 12570405 12570468 chr3R 12570954 12571017 11 548 25.5 22.0 23.8 0.4 612 chr3R 12570405 intron Octbeta2R - chr3R 12570711 intron Octbeta2R - chr3R 12571017 intron Octbeta2R - chr3R_11_12570001 chr3R_12570001 RAL-913 3546 chr3R 12587377 12587397 chr3R 12588294 12588329 5 927 31.5 41.0 36.2 0.1 952 chr3R 12587377 intron Octbeta2R - chr3R 12587853 intron Octbeta2R - chr3R 12588329 intron Octbeta2R - chr3R_5_12585001 chr3R_12585001 RAL-913 3547 chr3R 12599337 12599402 chr3R 12599470 12599535 17 130 27.0 22.0 24.5 0.7 198 chr3R 12599337 intergenic not near genes chr3R 12599436 intergenic not near genes chr3R 12599535 intergenic not near genes chr3R_17_12595001 chr3R_12595001 RAL-913 3548 chr3R 12605432 12605446 chr3R 12605565 12605580 9 134 22.0 21.0 21.5 0.4 148 chr3R 12605432 intergenic not near genes chr3R 12605506 intergenic not near genes chr3R 12605580 intergenic not near genes chr3R_9_12605001 chr3R_12605001 RAL-913 3549 chr3R 12665835 12665889 chr3R 12665946 12665994 4 115 23.5 20.5 22.0 0.2 159 chr3R 12665835 intron CG14395 + chr3R 12665914 intron CG14395 + chr3R 12665994 intron CG14395 + chr3R_4_12665001 chr3R_12665001 RAL-913 3550 chr3R 12720688 12720747 chr3R 12720908 12720967 18 220 21.5 18.5 20.0 0.9 279 chr3R 12720688 intron Men - chr3R 12720828 intron Men - chr3R 12720967 intron Men - chr3R_18_12720001 chr3R_12720001 RAL-913 3551 chr3R 12725938 12725954 chr3R 12726052 12726109 5 141 14.0 14.5 14.2 0.3 171 chr3R 12725938 intergenic not near genes chr3R 12726024 intergenic not near genes chr3R 12726109 intergenic not near genes chr3R_5_12725001 chr3R_12725001 RAL-913 3552 chr3R 12725956 12725969 chr3R 12726047 12726124 6 128 12.0 12.5 12.2 0.5 168 chr3R 12725956 intergenic not near genes chr3R 12726040 intergenic not near genes chr3R 12726124 intergenic not near genes chr3R_6_12725001 chr3R_12725001 RAL-913 3553 chr3R 12735130 12735179 chr3R 12735430 12735479 11 300 13.0 7.0 10.0 1.0 349 chr3R 12735130 intergenic not near genes chr3R 12735304 intergenic not near genes chr3R 12735479 intergenic not near genes chr3R_11_12735001 chr3R_12735001 RAL-913 3554 chr3R 12735751 12735823 chr3R 12735899 12735971 15 148 17.0 21.5 19.2 0.7 220 chr3R 12735751 intergenic not near genes chr3R 12735861 intergenic not near genes chr3R 12735971 intergenic not near genes chr3R_15_12735001 chr3R_12735001 RAL-913 3555 chr3R 12763062 12763150 chr3R 12763200 12763277 34 132 1.5 8.0 4.8 5.9 215 chr3R 12763062 intron beat-Vc - chr3R 12763170 intron beat-Vc - chr3R 12763277 intron beat-Vc - chr3R_34_12760001 chr3R_12760001 RAL-913 3556 chr3R 12766362 12766412 chr3R 12766496 12766516 5 128 11.5 14.0 12.8 0.4 154 chr3R 12766362 intron beat-Vc - chr3R 12766439 intron beat-Vc - chr3R 12766516 intron beat-Vc - chr3R_5_12765001 chr3R_12765001 RAL-913 3557 chr3R 12766416 12766438 chr3R 12766493 12766527 7 117 9.0 13.5 11.2 0.6 111 chr3R 12766416 intron beat-Vc - chr3R 12766472 intron beat-Vc - chr3R 12766527 intron beat-Vc - chr3R_7_12765001 chr3R_12765001 RAL-913 3558 chr3R 12787920 12787956 chr3R 12788053 12788089 5 133 31.5 34.0 32.8 0.1 169 chr3R 12787920 intergenic not near genes chr3R 12788004 intergenic not near genes chr3R 12788089 intergenic not near genes chr3R_5_12785001 chr3R_12785001 RAL-913 3559 chr3R 12809987 12810022 chr3R 12810114 12810145 9 122 23.0 21.0 22.0 0.4 158 chr3R 12809987 intergenic not near genes chr3R 12810066 intergenic not near genes chr3R 12810145 intergenic not near genes chr3R_9_12810001 chr3R_12810001 RAL-913 3560 chr3R 12818980 12819052 chr3R 12819113 12819186 6 126 13.0 13.0 13.0 0.4 206 chr3R 12818980 intergenic not near genes chr3R 12819083 intergenic not near genes chr3R 12819186 intergenic not near genes chr3R_6_12815001 chr3R_12815001 RAL-913 3561 chr3R 12825798 12825851 chr3R 12825914 12825981 10 126 14.5 16.0 15.2 0.6 183 chr3R 12825798 intergenic not near genes chr3R 12825890 intergenic not near genes chr3R 12825981 intergenic not near genes chr3R_10_12825001 chr3R_12825001 RAL-913 3562 chr3R 12864526 12864578 chr3R 12865061 12865113 roo 8 535 7.5 7.5 7.5 0.9 587 chr3R 12864526 intergenic not near genes chr3R 12864820 intergenic not near genes chr3R 12865113 intergenic not near genes chr3R_8_12860001 chr3R_12860001 RAL-913 3563 chr3R 12866440 12866513 chr3R 12866641 12866714 21 201 22.0 17.0 19.5 1.0 274 chr3R 12866440 intergenic not near genes chr3R 12866577 intergenic not near genes chr3R 12866714 intergenic not near genes chr3R_21_12865001 chr3R_12865001 RAL-913 3564 chr3R 12883745 12883821 chr3R 12883912 12883990 19 167 18.5 17.5 18.0 1.0 245 chr3R 12883745 intergenic not near genes chr3R 12883868 intergenic not near genes chr3R 12883990 intergenic not near genes chr3R_19_12880001 chr3R_12880001 RAL-913 3565 chr3R 12885062 12885069 chr3R 12885219 12885226 7 157 29.0 22.0 25.5 0.3 164 chr3R 12885062 intergenic not near genes chr3R 12885144 intergenic not near genes chr3R 12885226 intergenic not near genes chr3R_7_12885001 chr3R_12885001 RAL-913 3566 chr3R 12885071 12885132 chr3R 12885217 12885289 8 156 17.5 21.5 19.5 0.4 218 chr3R 12885071 intergenic not near genes chr3R 12885180 intergenic not near genes chr3R 12885289 intergenic not near genes chr3R_8_12885001 chr3R_12885001 RAL-913 3567 chr3R 12886886 12886942 chr3R 12887021 12887077 8 135 17.5 26.0 21.8 0.4 191 chr3R 12886886 intergenic not near genes chr3R 12886982 intergenic not near genes chr3R 12887077 intergenic not near genes chr3R_8_12885001 chr3R_12885001 RAL-913 3568 chr3R 12894587 12894603 chr3R 12894750 12894766 5 162 17.0 23.5 20.2 0.2 179 chr3R 12894587 intergenic not near genes chr3R 12894676 intergenic not near genes chr3R 12894766 intergenic not near genes chr3R_5_12890001 chr3R_12890001 RAL-913 3569 chr3R 12920112 12920144 chr3R 12925365 12925397 copia 10 5251 11.5 11.5 11.5 0.8 5285 chr3R 12920112 intron beat-Vb + chr3R 12922754 intron beat-Vb + chr3R 12925397 intron beat-Vb + chr3R_10_12920001 chr3R_12920001 RAL-913 3570 chr3R 12920147 12920175 chr3R 12925357 12925401 copia 10 5241 6.5 11.0 8.8 1.0 5254 chr3R 12920147 intron beat-Vb + chr3R 12922774 intron beat-Vb + chr3R 12925401 intron beat-Vb + chr3R_10_12920001 chr3R_12920001 RAL-913 3571 chr3R 12935306 12935321 chr3R 12935460 12935470 7 153 27.0 3.5 15.2 0.4 164 chr3R 12935306 intergenic beat-Vb + chr3R 12935388 intergenic not near genes chr3R 12935470 intergenic not near genes chr3R_7_12935001 chr3R_12935001 RAL-913 3572 chr3R 12947243 12947318 chr3R 12947455 12947530 14 211 17.0 23.0 20.0 0.7 287 chr3R 12947243 intergenic not near genes chr3R 12947386 intergenic not near genes chr3R 12947530 intergenic not near genes chr3R_14_12945001 chr3R_12945001 RAL-913 3573 chr3R 12953159 12953224 chr3R 12953572 12953638 6 402 22.0 23.0 22.5 0.3 479 chr3R 12953159 intron grsm - chr3R 12953398 intron grsm - chr3R 12953638 intron grsm - chr3R_6_12950001 chr3R_12950001 RAL-913 3574 chr3R 12972508 12972583 chr3R 12972697 12972772 40 188 19.0 14.0 16.5 2.3 264 chr3R 12972508 intron CG7381 - chr3R 12972640 intron CG7381 - chr3R 12972772 intron CG7381 - chr3R_40_12970001 chr3R_12970001 RAL-913 3575 chr3R 13018109 13018161 chr3R 13018238 13018290 12 129 32.5 33.5 33.0 0.4 181 chr3R 13018109 intron CtBP + chr3R 13018200 intron CtBP + chr3R 13018290 intron CtBP + chr3R_12_13015001 chr3R_13015001 RAL-913 3576 chr3R 13026578 13026593 chr3R 13026697 13026723 6 128 33.0 28.0 30.5 0.2 145 chr3R 13026578 3` UTR CG12360 - chr3R 13026650 3` UTR CG12360 - chr3R 13026723 3` UTR CG12360 - chr3R_6_13025001 chr3R_13025001 RAL-913 3577 chr3R 13036307 13036360 chr3R 13036464 13036511 7 154 21.0 27.0 24.0 0.3 204 chr3R 13036307 intron ry + chr3R 13036409 intron ry + chr3R 13036511 exon ry + chr3R_7_13035001 chr3R_13035001 RAL-913 3578 chr3R 13042950 13043001 chr3R 13043234 13043285 7 284 24.5 24.0 24.2 0.3 335 chr3R 13042950 exon CG11670 + chr3R 13043118 intron CG11670 + chr3R 13043285 exon CG11670 + chr3R_7_13040001 chr3R_13040001 RAL-913 3579 chr3R 13059911 13059965 chr3R 13060156 13060210 23 243 21.5 18.5 20.0 1.1 299 chr3R 13059911 intron sim + chr3R 13060060 intron sim + chr3R 13060210 intron sim + chr3R_23_13060001 chr3R_13060001 RAL-913 3580 chr3R 13064734 13064789 chr3R 13064883 13064936 12 148 21.0 21.5 21.2 0.5 202 chr3R 13064734 intron sim + chr3R 13064835 intron sim + chr3R 13064936 intron sim + chr3R_12_13060001 chr3R_13060001 RAL-913 3581 chr3R 13066964 13067002 chr3R 13067101 13067139 11 137 24.5 24.0 24.2 0.4 175 chr3R 13066964 intron sim + chr3R 13067052 intron sim + chr3R 13067139 intron sim + chr3R_11_13065001 chr3R_13065001 RAL-913 3582 chr3R 13067801 13067823 chr3R 13067931 13067953 8 127 25.0 21.5 23.2 0.3 152 chr3R 13067801 intron sim + chr3R 13067877 intron sim + chr3R 13067953 intron sim + chr3R_8_13065001 chr3R_13065001 RAL-913 3583 chr3R 13067824 13067869 chr3R 13067918 13067999 10 126 16.0 19.5 17.8 0.5 175 chr3R 13067824 intron sim + chr3R 13067912 intron sim + chr3R 13067999 intron sim + chr3R_10_13065001 chr3R_13065001 RAL-913 3584 chr3R 13075315 13075379 chr3R 13075446 13075491 16 130 17.5 14.0 15.8 1.0 176 chr3R 13075315 intron sim + chr3R 13075403 intron sim + chr3R 13075491 intron sim + chr3R_16_13075001 chr3R_13075001 RAL-913 3585 chr3R 13120723 13120795 chr3R 13120850 13120922 16 119 16.0 17.0 16.5 0.9 199 chr3R 13120723 intron timeout + chr3R 13120822 intron timeout + chr3R 13120922 intron timeout + chr3R_16_13120001 chr3R_13120001 RAL-913 3586 chr3R 13135786 13135854 chr3R 13138001 13138079 pogo 30 2220 4.0 8.0 6.0 4.3 2293 chr3R 13135786 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136932 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138079 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_30_13135001 chr3R_13135001 RAL-913 3587 chr3R 13138281 13138317 chr3R 13138416 13138455 9 135 20.0 16.5 18.2 0.5 174 chr3R 13138281 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138368 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138455 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_9_13135001 chr3R_13135001 RAL-913 3588 chr3R 13138320 13138347 chr3R 13138414 13138470 9 124 18.0 15.5 16.8 0.5 150 chr3R 13138320 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138395 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138470 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_9_13135001 chr3R_13135001 RAL-913 3589 chr3R 13142990 13143062 chr3R 13148616 13148678 mdg3 31 5623 4.5 7.0 5.8 4.6 5688 chr3R 13142990 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145834 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148678 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_31_13145001 chr3R_13145001 RAL-913 3590 chr3R 13151355 13151393 chr3R 13151502 13151567 6 158 13.0 20.5 16.8 0.3 212 chr3R 13151355 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13151461 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13151567 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_6_13150001 chr3R_13150001 RAL-913 3591 chr3R 13170625 13170651 chr3R 13170751 13170777 4 126 27.0 28.0 27.5 0.1 152 chr3R 13170625 intergenic not near genes chr3R 13170701 intergenic not near genes chr3R 13170777 intergenic not near genes chr3R_4_13170001 chr3R_13170001 RAL-913 3592 chr3R 13182452 13182465 chr3R 13182558 13182578 4 117 19.5 20.5 20.0 0.2 126 chr3R 13182452 intergenic CG8138 + chr3R 13182515 intergenic CG8138 + chr3R 13182578 intergenic CG8138 + chr3R_4_13180001 chr3R_13180001 RAL-913 3593 chr3R 13182467 13182495 chr3R 13182545 13182623 4 110 22.0 18.5 20.2 0.2 156 chr3R 13182467 intergenic CG8138 + chr3R 13182545 intergenic CG8138 + chr3R 13182623 intergenic CG8138 + chr3R_4_13180001 chr3R_13180001 RAL-913 3594 chr3R 13195910 13195980 chr3R 13196055 13196100 16 143 22.0 26.0 24.0 0.6 190 chr3R 13195910 intergenic not near genes chr3R 13196005 intergenic not near genes chr3R 13196100 intergenic not near genes chr3R_16_13195001 chr3R_13195001 RAL-913 3595 chr3R 13248605 13248670 chr3R 13248754 13248819 31 149 37.5 28.0 32.8 0.9 214 chr3R 13248605 intron Ace - chr3R 13248712 intron Ace - chr3R 13248819 intron Ace - chr3R_31_13245001 chr3R_13245001 RAL-913 3596 chr3R 13249562 13249588 chr3R 13249726 13249752 7 164 19.5 6.0 12.8 0.5 190 chr3R 13249562 intron Ace - chr3R 13249657 intron Ace - chr3R 13249752 intron Ace - chr3R_7_13245001 chr3R_13245001 RAL-913 3597 chr3R 13260675 13260744 chr3R 13260856 13260925 19 179 25.5 24.5 25.0 0.7 250 chr3R 13260675 intron CG11686 + chr3R 13260800 intron CG11686 + chr3R 13260925 intron CG11686 + chr3R_19_13260001 chr3R_13260001 RAL-913 3598 chr3R 13272021 13272076 chr3R 13272156 13272211 9 134 33.5 35.0 34.2 0.3 190 chr3R 13272021 intergenic CG8449 - chr3R 13272116 intergenic CG8449 - chr3R 13272211 intergenic CG8449 - chr3R_9_13270001 chr3R_13270001 RAL-913 3599 chr3R 13274172 13274245 chr3R 13274301 13274345 13 127 22.5 22.0 22.2 0.6 173 chr3R 13274172 intergenic not near genes chr3R 13274258 intergenic not near genes chr3R 13274345 intergenic not near genes chr3R_13_13270001 chr3R_13270001 RAL-913 3600 chr3R 13305615 13305663 chr3R 13305752 13305800 10 137 26.0 29.5 27.8 0.3 185 chr3R 13305615 intron CG32473 + chr3R 13305708 intron CG32473 + chr3R 13305800 intron CG32473 + chr3R_10_13305001 chr3R_13305001 RAL-913 3601 chr3R 13306074 13306143 chr3R 13306511 13306580 16 436 25.5 25.5 25.5 0.6 506 chr3R 13306074 intron CG32473 + chr3R 13306327 intron CG32473 + chr3R 13306580 intron CG32473 + chr3R_16_13305001 chr3R_13305001 RAL-913 3602 chr3R 13314058 13314122 chr3R 13318896 13318960 Doc 23 4837 11.0 5.5 8.2 2.5 4902 chr3R 13314058 intergenic not near genes chr3R 13316509 intergenic not near genes chr3R 13318960 intergenic CG45080 - chr3R_23_13315001 chr3R_13315001 RAL-913 3603 chr3R 13323913 13323981 chr3R 13324074 13324142 6 161 27.5 31.5 29.5 0.2 229 chr3R 13323913 intergenic not near genes chr3R 13324028 intergenic not near genes chr3R 13324142 intergenic not near genes chr3R_6_13320001 chr3R_13320001 RAL-913 3604 chr3R 13326891 13326964 chr3R 13327036 13327109 14 143 24.5 25.5 25.0 0.5 218 chr3R 13326891 intergenic not near genes chr3R 13327000 intergenic not near genes chr3R 13327109 intergenic not near genes chr3R_14_13325001 chr3R_13325001 RAL-913 3605 chr3R 13356047 13356111 chr3R 13356182 13356246 14 134 20.0 22.0 21.0 0.6 199 chr3R 13356047 intergenic not near genes chr3R 13356146 intergenic not near genes chr3R 13356246 intergenic not near genes chr3R_14_13355001 chr3R_13355001 RAL-913 3606 chr3R 13364584 13364616 chr3R 13364718 13364750 8 134 27.5 20.5 24.0 0.3 166 chr3R 13364584 intron poly - chr3R 13364667 intron poly - chr3R 13364750 intron poly - chr3R_8_13360001 chr3R_13360001 RAL-913 3607 chr3R 13391594 13391658 chr3R 13391722 13391786 10 128 30.5 27.0 28.8 0.3 192 chr3R 13391594 intron CCHa2 - chr3R 13391690 intron CCHa2 - chr3R 13391786 intron CCHa2 - chr3R_10_13390001 chr3R_13390001 RAL-913 3608 chr3R 13418617 13418651 chr3R 13418743 13418777 15 125 29.0 25.0 27.0 0.5 160 chr3R 13418617 intergenic not near genes chr3R 13418697 intergenic not near genes chr3R 13418777 intergenic not near genes chr3R_15_13415001 chr3R_13415001 RAL-913 3609 chr3R 13418653 13418684 chr3R 13418741 13418810 10 122 22.0 25.0 23.5 0.4 157 chr3R 13418653 intergenic not near genes chr3R 13418732 intergenic not near genes chr3R 13418810 intergenic not near genes chr3R_10_13415001 chr3R_13415001 RAL-913 3610 chr3R 13435344 13435418 chr3R 13435569 13435643 20 225 12.5 21.5 17.0 1.1 299 chr3R 13435344 intergenic yrt - chr3R 13435494 intergenic not near genes chr3R 13435643 intergenic not near genes chr3R_20_13435001 chr3R_13435001 RAL-913 3611 chr3R 13496586 13496660 chr3R 13496715 13496789 14 129 27.0 29.5 28.2 0.5 203 chr3R 13496586 intergenic not near genes chr3R 13496688 intergenic not near genes chr3R 13496789 intergenic not near genes chr3R_14_13495001 chr3R_13495001 RAL-913 3612 chr3R 13517180 13517259 chr3R 13520046 13520120 jockey 19 2866 5.5 0.0 2.8 5.0 2940 chr3R 13517180 intergenic not near genes chr3R 13518650 intergenic not near genes chr3R 13520120 intergenic not near genes chr3R_19_13515001 chr3R_13515001 RAL-913 3613 chr3R 13526650 13526686 chr3R 13526779 13526815 8 129 18.0 6.5 12.2 0.6 165 chr3R 13526650 intergenic not near genes chr3R 13526732 intergenic not near genes chr3R 13526815 intergenic not near genes chr3R_8_13525001 chr3R_13525001 RAL-913 3614 chr3R 13554113 13554166 chr3R 13554242 13554285 13 126 19.0 27.0 23.0 0.5 172 chr3R 13554113 intergenic not near genes chr3R 13554199 intergenic not near genes chr3R 13554285 intergenic not near genes chr3R_13_13550001 chr3R_13550001 RAL-913 3615 chr3R 13563305 13563354 chr3R 13563427 13563481 14 126 12.0 11.5 11.8 1.1 176 chr3R 13563305 intergenic not near genes chr3R 13563393 intergenic not near genes chr3R 13563481 intergenic not near genes chr3R_14_13560001 chr3R_13560001 RAL-913 3616 chr3R 13580806 13580829 chr3R 13580939 13580962 6 133 22.0 25.5 23.8 0.2 156 chr3R 13580806 intergenic not near genes chr3R 13580884 intergenic not near genes chr3R 13580962 intergenic not near genes chr3R_6_13580001 chr3R_13580001 RAL-913 3617 chr3R 13581113 13581166 chr3R 13581563 13581617 9 446 26.0 21.5 23.8 0.4 504 chr3R 13581113 intergenic not near genes chr3R 13581365 intergenic not near genes chr3R 13581617 intergenic not near genes chr3R_9_13580001 chr3R_13580001 RAL-913 3618 chr3R 13599167 13599196 chr3R 13599328 13599357 10 161 29.0 25.0 27.0 0.4 190 chr3R 13599167 intergenic not near genes chr3R 13599262 intergenic not near genes chr3R 13599357 intergenic not near genes chr3R_10_13595001 chr3R_13595001 RAL-913 3619 chr3R 13603009 13603307 chr3R 13603150 13603449 23 141 26.0 10.5 18.2 1.2 440 chr3R 13603009 intergenic not near genes chr3R 13603229 intergenic not near genes chr3R 13603449 intergenic not near genes chr3R_23_13600001 chr3R_13600001 RAL-913 3620 chr3R 13603311 13603358 chr3R 13603453 13603499 14 141 21.5 17.0 19.2 0.7 188 chr3R 13603311 intergenic not near genes chr3R 13603405 intergenic not near genes chr3R 13603499 intergenic not near genes chr3R_14_13600001 chr3R_13600001 RAL-913 3621 chr3R 13604025 13604078 chr3R 13604310 13604363 16 283 16.0 18.0 17.0 0.9 338 chr3R 13604025 intergenic not near genes chr3R 13604194 intergenic not near genes chr3R 13604363 intergenic not near genes chr3R_16_13600001 chr3R_13600001 RAL-913 3622 chr3R 13606675 13606725 chr3R 13606872 13606922 11 195 21.5 22.0 21.8 0.5 247 chr3R 13606675 intergenic CG9759 - chr3R 13606798 intergenic CG9759 - chr3R 13606922 intergenic CG9759 - chr3R_11_13605001 chr3R_13605001 RAL-913 3623 chr3R 13617564 13617641 chr3R 13617869 13617946 14 305 28.5 26.0 27.2 0.5 382 chr3R 13617564 intergenic CR45680 - chr3R 13617755 3` UTR CR45680 - chr3R 13617946 3` UTR CR45680 - chr3R_14_13615001 chr3R_13615001 RAL-913 3624 chr3R 13625642 13625718 chr3R 13625773 13625849 30 131 6.5 10.0 8.2 3.3 207 chr3R 13625642 intergenic not near genes chr3R 13625746 intergenic not near genes chr3R 13625849 intergenic not near genes chr3R_30_13625001 chr3R_13625001 RAL-913 3625 chr3R 13659744 13659848 chr3R 13659936 13659986 13 149 3.0 0.0 1.5 5.2 242 chr3R 13659744 intron Hrb87F - chr3R 13659865 intron Hrb87F - chr3R 13659986 intron Hrb87F - chr3R_13_13655001 chr3R_13655001 RAL-913 3626 chr3R 13672896 13672958 chr3R 13673024 13673086 14 126 26.0 22.5 24.2 0.6 190 chr3R 13672896 intron Task6 - chr3R 13672991 intron Task6 - chr3R 13673086 intron Task6 - chr3R_14_13670001 chr3R_13670001 RAL-913 3627 chr3R 13693028 13693028 chr3R 21907534 21907535 4 8214506 42.0 38.5 40.2 0.1 8214507 chr3R 13693028 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907535 intergenic CG6678 + chr3R_4_17800001 chr3R_17800001 RAL-913 3628 chr3R 13707280 13707318 chr3R 13707412 13707450 9 130 23.0 26.5 24.8 0.3 170 chr3R 13707280 intron Adgf-C + chr3R 13707365 intron Adgf-C + chr3R 13707450 exon Adgf-C + chr3R_9_13705001 chr3R_13705001 RAL-913 3629 chr3R 13714493 13714542 chr3R 13714682 13714731 8 189 24.5 30.0 27.2 0.3 238 chr3R 13714493 intergenic CR34044 - chr3R 13714612 intergenic CR34044 - chr3R 13714731 intergenic CG34383 + chr3R_8_13710001 chr3R_13710001 RAL-913 3630 chr3R 13719915 13719922 chr3R 13720424 13720431 5 509 30.5 23.0 26.8 0.2 516 chr3R 13719915 intron CG34383 + chr3R 13720173 intron CG34383 + chr3R 13720431 intron CG34383 + chr3R_5_13720001 chr3R_13720001 RAL-913 3631 chr3R 13719927 13719973 chr3R 13720416 13720482 19 505 18.5 20.5 19.5 0.9 555 chr3R 13719927 intron CG34383 + chr3R 13720204 intron CG34383 + chr3R 13720482 intron CG34383 + chr3R_19_13720001 chr3R_13720001 RAL-913 3632 chr3R 13736035 13736078 chr3R 13736162 13736218 11 134 12.5 19.0 15.8 0.7 183 chr3R 13736035 intron CG34383 + chr3R 13736126 intron CG34383 + chr3R 13736218 intron CG34383 + chr3R_11_13735001 chr3R_13735001 RAL-913 3633 chr3R 13745382 13745439 chr3R 13745550 13745581 15 166 14.0 7.5 10.8 1.3 199 chr3R 13745382 intron CG34383 + chr3R 13745482 intron CG34383 + chr3R 13745581 intron CG34383 + chr3R_15_13745001 chr3R_13745001 RAL-913 3634 chr3R 13758092 13758170 chr3R 13758228 13758306 11 136 0.0 7.0 3.5 2.4 214 chr3R 13758092 intron CG34383 + chr3R 13758199 intron CG34383 + chr3R 13758306 intron CG34383 + chr3R_11_13755001 chr3R_13755001 RAL-913 3635 chr3R 13830204 13830213 chr3R 13830284 13830347 4 124 18.0 21.0 19.5 0.2 143 chr3R 13830204 intergenic not near genes chr3R 13830276 intergenic not near genes chr3R 13830347 intergenic not near genes chr3R_4_13830001 chr3R_13830001 RAL-913 3636 chr3R 13831795 13831815 chr3R 13831934 13831939 4 135 5.0 0.0 2.5 1.1 144 chr3R 13831795 intergenic not near genes chr3R 13831867 intergenic not near genes chr3R 13831939 intergenic not near genes chr3R_4_13830001 chr3R_13830001 RAL-913 3637 chr3R 13872149 13872196 chr3R 13872272 13872325 10 127 17.0 15.0 16.0 0.6 176 chr3R 13872149 intron E5 - chr3R 13872237 intron E5 - chr3R 13872325 intron E5 - chr3R_10_13870001 chr3R_13870001 RAL-913 3638 chr3R 13896017 13896035 chr3R 13896557 13896575 8 540 13.5 5.0 9.2 0.8 558 chr3R 13896017 intergenic not near genes chr3R 13896296 intergenic not near genes chr3R 13896575 intergenic not near genes chr3R_8_13895001 chr3R_13895001 RAL-913 3639 chr3R 13915651 13915709 chr3R 13916043 13916101 23 391 17.0 15.5 16.2 1.3 450 chr3R 13915651 intergenic not near genes chr3R 13915876 intergenic not near genes chr3R 13916101 intergenic not near genes chr3R_23_13915001 chr3R_13915001 RAL-913 3640 chr3R 13916268 13916300 chr3R 13916402 13916435 8 132 23.0 18.0 20.5 0.4 167 chr3R 13916268 intergenic not near genes chr3R 13916352 intergenic not near genes chr3R 13916435 intergenic not near genes chr3R_8_13915001 chr3R_13915001 RAL-913 3641 chr3R 13916301 13916331 chr3R 13916399 13916466 9 128 19.0 17.5 18.2 0.5 165 chr3R 13916301 intergenic not near genes chr3R 13916384 intergenic not near genes chr3R 13916466 intergenic not near genes chr3R_9_13915001 chr3R_13915001 RAL-913 3642 chr3R 13926295 13926350 chr3R 13926433 13926486 7 136 12.5 1.5 7.0 0.9 191 chr3R 13926295 intergenic not near genes chr3R 13926390 intergenic not near genes chr3R 13926486 intergenic not near genes chr3R_7_13925001 chr3R_13925001 RAL-913 3643 chr3R 13948182 13948240 chr3R 13948325 13948380 9 141 23.5 19.5 21.5 0.4 198 chr3R 13948182 intergenic CG31517 + chr3R 13948281 intergenic CG31517 + chr3R 13948380 intergenic CG31517 + chr3R_9_13945001 chr3R_13945001 RAL-913 3644 chr3R 13949195 13949249 chr3R 13949323 13949377 6 128 7.5 13.0 10.2 0.5 182 chr3R 13949195 3` UTR CG31517 + chr3R 13949286 3` UTR CG31517 + chr3R 13949377 3` UTR CG31517 + chr3R_6_13945001 chr3R_13945001 RAL-913 3645 chr3R 13957336 13957393 chr3R 13957568 13957624 18 232 16.0 16.0 16.0 1.1 288 chr3R 13957336 intergenic not near genes chr3R 13957480 intergenic not near genes chr3R 13957624 intergenic not near genes chr3R_18_13955001 chr3R_13955001 RAL-913 3646 chr3R 13974470 13974495 chr3R 13974597 13974622 9 127 10.5 19.0 14.8 0.6 152 chr3R 13974470 intron,5` UTR rdx -,CR43460 + chr3R 13974546 intron,5` UTR rdx -,CR43460 + chr3R 13974622 intron,5` UTR rdx -,CR43460 + chr3R_9_13970001 chr3R_13970001 RAL-913 3647 chr3R 13975333 13975399 chr3R 13975463 13975523 25 129 29.0 26.0 27.5 0.9 190 chr3R 13975333 intron rdx - chr3R 13975428 intron rdx - chr3R 13975523 intron rdx - chr3R_25_13975001 chr3R_13975001 RAL-913 3648 chr3R 13981187 13981260 chr3R 13981347 13981420 18 160 28.5 23.0 25.8 0.7 233 chr3R 13981187 intron rdx - chr3R 13981304 intron rdx - chr3R 13981420 intron rdx - chr3R_18_13980001 chr3R_13980001 RAL-913 3649 chr3R 14003228 14003284 chr3R 14003369 14003425 11 141 23.5 29.5 26.5 0.4 197 chr3R 14003228 intron rdx - chr3R 14003326 intron rdx - chr3R 14003425 intron rdx - chr3R_11_14000001 chr3R_14000001 RAL-913 3650 chr3R 14014293 14014304 chr3R 14014482 14014493 7 189 9.5 10.5 10.0 0.6 200 chr3R 14014293 intron rdx - chr3R 14014393 intron rdx - chr3R 14014493 intron rdx - chr3R_7_14010001 chr3R_14010001 RAL-913 3651 chr3R 14021589 14021661 chr3R 14023464 14023536 S-element 22 1875 11.0 9.5 10.2 2.0 1947 chr3R 14021589 intron rdx - chr3R 14022562 intron rdx - chr3R 14023536 intron rdx - chr3R_22_14020001 chr3R_14020001 RAL-913 3652 chr3R 14029813 14029865 chr3R 14029951 14030003 7 138 28.0 32.5 30.2 0.2 190 chr3R 14029813 intron,exon rdx -,Cyp6d5 + chr3R 14029908 intron,intron rdx -,Cyp6d5 + chr3R 14030003 intron,intron rdx -,Cyp6d5 + chr3R_7_14025001 chr3R_14025001 RAL-913 3653 chr3R 14035269 14035333 chr3R 14035400 14035464 17 131 6.5 13.5 10.0 1.5 195 chr3R 14035269 exon CG9922 - chr3R 14035366 intron CG9922 - chr3R 14035464 exon CG9922 - chr3R_17_14035001 chr3R_14035001 RAL-913 3654 chr3R 14037480 14037531 chr3R 14042078 14042125 5 4591 28.5 34.0 31.2 0.2 4645 chr3R 14037480 intergenic not near genes chr3R 14039802 intergenic not near genes chr3R 14042125 intergenic not near genes chr3R_5_14035001 chr3R_14035001 RAL-913 3655 chr3R 14037556 14037586 chr3R 14037677 14037713 6 129 10.0 6.5 8.2 0.7 157 chr3R 14037556 intergenic not near genes chr3R 14037634 intergenic not near genes chr3R 14037713 intergenic not near genes chr3R_6_14035001 chr3R_14035001 RAL-913 3656 chr3R 14037160 14037229 chr3R 14043000 14043069 9 5840 37.5 56.0 46.8 0.2 5909 chr3R 14037160 intergenic not near genes chr3R 14040114 intergenic not near genes chr3R 14043069 intergenic not near genes chr3R_9_14040001 chr3R_14040001 RAL-913 3657 chr3R 14045890 14045905 chr3R 14046021 14046038 4 132 22.5 34.5 28.5 0.1 148 chr3R 14045890 intergenic not near genes chr3R 14045964 intergenic not near genes chr3R 14046038 intergenic not near genes chr3R_4_14045001 chr3R_14045001 RAL-913 3658 chr3R 14047749 14047803 chr3R 14047890 14047942 8 140 26.0 32.5 29.2 0.3 193 chr3R 14047749 intergenic not near genes chr3R 14047846 intergenic not near genes chr3R 14047942 intergenic not near genes chr3R_8_14045001 chr3R_14045001 RAL-913 3659 chr3R 14058080 14058090 chr3R 14058250 14058260 4 170 32.5 12.5 22.5 0.2 180 chr3R 14058080 5` UTR foxo + chr3R 14058170 intron foxo + chr3R 14058260 intron foxo + chr3R_4_14055001 chr3R_14055001 RAL-913 3660 chr3R 14058091 14058144 chr3R 14058244 14058314 20 169 23.5 12.5 18.0 1.1 223 chr3R 14058091 5` UTR foxo + chr3R 14058202 intron foxo + chr3R 14058314 intron foxo + chr3R_20_14055001 chr3R_14055001 RAL-913 3661 chr3R 14067095 14067150 chr3R 14067224 14067279 29 128 3.5 5.5 4.5 5.3 184 chr3R 14067095 exon foxo + chr3R 14067187 intron foxo + chr3R 14067279 intron foxo + chr3R_29_14065001 chr3R_14065001 RAL-913 3662 chr3R 14070084 14070140 chr3R 14070215 14070271 9 129 32.0 30.5 31.2 0.3 187 chr3R 14070084 intron foxo + chr3R 14070178 intron foxo + chr3R 14070271 intron foxo + chr3R_9_14070001 chr3R_14070001 RAL-913 3663 chr3R 14083324 14083359 chr3R 14083504 14083539 7 180 27.0 27.5 27.2 0.2 215 chr3R 14083324 intron foxo + chr3R 14083432 intron foxo + chr3R 14083539 intron foxo + chr3R_7_14080001 chr3R_14080001 RAL-913 3664 chr3R 14097045 14097127 chr3R 14097179 14097251 8 131 22.5 21.0 21.8 0.4 206 chr3R 14097045 intergenic CCHa1 -,CG9920 - chr3R 14097148 intergenic CG9920 -,CCHa1 - chr3R 14097251 intergenic CG9920 -,CCHa1 - chr3R_8_14095001 chr3R_14095001 RAL-913 3665 chr3R 14099850 14099886 chr3R 14099981 14100017 9 131 32.5 31.5 32.0 0.3 167 chr3R 14099850 3` UTR PK1-R - chr3R 14099934 3` UTR PK1-R - chr3R 14100017 3` UTR PK1-R - chr3R_9_14095001 chr3R_14095001 RAL-913 3666 chr3R 14109035 14109075 chr3R 14109166 14109206 12 131 20.5 13.5 17.0 0.7 171 chr3R 14109035 intergenic CR44237 -,Or88a + chr3R 14109120 intergenic CR44237 -,Or88a + chr3R 14109206 intergenic CR44237 -,Or88a + chr3R_12_14105001 chr3R_14105001 RAL-913 3667 chr3R 14169678 14169768 chr3R 14169821 14169907 16 136 0.0 6.0 3.0 4.0 229 chr3R 14169678 3` UTR Dop1R1 - chr3R 14169792 3` UTR Dop1R1 - chr3R 14169907 3` UTR Dop1R1 - chr3R_16_14165001 chr3R_14165001 RAL-913 3668 chr3R 14180767 14180841 chr3R 14185582 14185656 F-element 15 4815 4.5 10.5 7.5 1.8 4889 chr3R 14180767 intron Dop1R1 - chr3R 14183212 intron Dop1R1 - chr3R 14185656 intron Dop1R1 - chr3R_15_14180001 chr3R_14180001 RAL-913 3669 chr3R 14194412 14194459 chr3R 14203596 14203640 roo 5 9181 11.5 3.0 7.2 0.6 9228 chr3R 14194412 intron Dop1R1 - chr3R 14199026 intron Dop1R1 - chr3R 14203640 intron Dop1R1 - chr3R_5_14195001 chr3R_14195001 RAL-913 3670 chr3R 14236896 14236923 chr3R 14244440 14244471 Idefix 4 7545 24.0 8.5 16.2 0.2 7575 chr3R 14236896 exon CG43291 - chr3R 14240684 intron CG43291 - chr3R 14244471 intron CG43291 - chr3R_4_14240001 chr3R_14240001 RAL-913 3671 chr3R 14246318 14246415 chr3R 14247886 14247961 jockey 39 1547 8.5 9.0 8.8 4.0 1643 chr3R 14246318 intergenic not near genes chr3R 14247140 intergenic not near genes chr3R 14247961 intergenic not near genes chr3R_39_14245001 chr3R_14245001 RAL-913 3672 chr3R 14256730 14256767 chr3R 14256866 14256903 18 136 5.5 16.0 10.8 1.5 173 chr3R 14256730 intron,exon Aats-met -,CG43179 + chr3R 14256816 intron,3` UTR Aats-met -,CG43179 + chr3R 14256903 intron,3` UTR Aats-met -,CG43179 + chr3R_18_14255001 chr3R_14255001 RAL-913 3673 chr3R 14257304 14257365 chr3R 14257438 14257514 17 141 13.5 25.0 19.2 0.8 210 chr3R 14257304 intron Aats-met - chr3R 14257409 intron Aats-met - chr3R 14257514 intron Aats-met - chr3R_17_14255001 chr3R_14255001 RAL-913 3674 chr3R 14258434 14258506 chr3R 14258570 14258638 14 125 17.5 24.0 20.8 0.6 204 chr3R 14258434 intron Aats-met - chr3R 14258536 intron Aats-met - chr3R 14258638 exon Aats-met - chr3R_14_14255001 chr3R_14255001 RAL-913 3675 chr3R 14281041 14281108 chr3R 14281168 14281235 26 127 24.0 26.5 25.2 1.0 194 chr3R 14281041 intron trx - chr3R 14281138 intron trx - chr3R 14281235 intron trx - chr3R_26_14280001 chr3R_14280001 RAL-913 3676 chr3R 14313584 14313619 chr3R 14313720 14313765 13 145 8.0 6.5 7.2 1.6 181 chr3R 14313584 exon CG31321 + chr3R 14313674 intron CG31321 + chr3R 14313765 intron CG31321 + chr3R_13_14310001 chr3R_14310001 RAL-913 3677 chr3R 14313652 14313678 chr3R 14313728 14313823 4 128 4.5 7.5 6.0 0.6 171 chr3R 14313652 intron CG31321 + chr3R 14313738 intron CG31321 + chr3R 14313823 exon CG31321 + chr3R_4_14310001 chr3R_14310001 RAL-913 3678 chr3R 14363722 14363745 chr3R 14363854 14363877 6 132 24.0 27.5 25.8 0.2 155 chr3R 14363722 intron NK7.1 - chr3R 14363800 intron NK7.1 - chr3R 14363877 intron NK7.1 - chr3R_6_14360001 chr3R_14360001 RAL-913 3679 chr3R 14364039 14364060 chr3R 14364162 14364186 7 125 31.0 30.5 30.8 0.2 147 chr3R 14364039 intron NK7.1 - chr3R 14364112 intron NK7.1 - chr3R 14364186 intron NK7.1 - chr3R_7_14360001 chr3R_14360001 RAL-913 3680 chr3R 14364065 14364088 chr3R 14364153 14364212 4 108 30.0 29.0 29.5 0.1 147 chr3R 14364065 intron NK7.1 - chr3R 14364138 intron NK7.1 - chr3R 14364212 intron NK7.1 - chr3R_4_14360001 chr3R_14360001 RAL-913 3681 chr3R 14374536 14374568 chr3R 14374697 14374729 8 161 24.5 19.0 21.8 0.4 193 chr3R 14374536 intergenic not near genes chr3R 14374632 intergenic not near genes chr3R 14374729 intergenic not near genes chr3R_8_14370001 chr3R_14370001 RAL-913 3682 chr3R 14504982 14504993 chr3R 14505108 14505113 roo 4 123 22.5 27.0 24.8 0.2 131 chr3R 14504982 intron CR44177 + chr3R 14505048 intron CR44177 + chr3R 14505113 intron CR44177 + chr3R_4_14505001 chr3R_14505001 RAL-913 3683 chr3R 14527351 14527414 chr3R 14527478 14527541 15 126 9.0 11.0 10.0 1.4 190 chr3R 14527351 intron Pde6 - chr3R 14527446 intron Pde6 - chr3R 14527541 intron Pde6 - chr3R_15_14525001 chr3R_14525001 RAL-913 3684 chr3R 14545991 14546057 chr3R 14546118 14546184 16 125 27.0 19.0 23.0 0.7 193 chr3R 14545991 intron Pde6 - chr3R 14546088 intron Pde6 - chr3R 14546184 intron Pde6 - chr3R_16_14545001 chr3R_14545001 RAL-913 3685 chr3R 14556534 14556611 chr3R 14556675 14556752 22 137 7.5 3.0 5.2 3.5 218 chr3R 14556534 intron Pde6 - chr3R 14556643 intron Pde6 - chr3R 14556752 intron Pde6 - chr3R_22_14555001 chr3R_14555001 RAL-913 3686 chr3R 14563977 14563991 chr3R 14564127 14564141 7 150 29.0 29.0 29.0 0.2 164 chr3R 14563977 intergenic CG8087 - chr3R 14564059 intergenic CG8087 - chr3R 14564141 intergenic CG8087 - chr3R_7_14560001 chr3R_14560001 RAL-913 3687 chr3R 14608419 14608477 chr3R 14608561 14608619 30 142 5.0 12.5 8.8 3.1 200 chr3R 14608419 intergenic stumps + chr3R 14608519 intergenic stumps + chr3R 14608619 intergenic not near genes chr3R_30_14605001 chr3R_14605001 RAL-913 3688 chr3R 14612395 14612466 chr3R 14612565 14612636 16 170 28.5 29.5 29.0 0.5 241 chr3R 14612395 intron CG14853 + chr3R 14612516 intron CG14853 + chr3R 14612636 intron CG14853 + chr3R_16_14610001 chr3R_14610001 RAL-913 3689 chr3R 14615234 14615272 chr3R 14615374 14615412 7 140 21.5 26.5 24.0 0.3 178 chr3R 14615234 intron CG14853 + chr3R 14615323 intron CG14853 + chr3R 14615412 intron CG14853 + chr3R_7_14615001 chr3R_14615001 RAL-913 3690 chr3R 14662269 14662338 chr3R 14662400 14662469 8 131 23.5 20.5 22.0 0.3 200 chr3R 14662269 exon Rad17 - chr3R 14662369 intron Rad17 - chr3R 14662469 exon Rad17 - chr3R_8_14660001 chr3R_14660001 RAL-913 3691 chr3R 14671787 14671828 chr3R 14671947 14671952 10 155 23.5 31.0 27.2 0.4 165 chr3R 14671787 exon Meltrin - chr3R 14671870 intron Meltrin - chr3R 14671952 intron Meltrin - chr3R_10_14670001 chr3R_14670001 RAL-913 3692 chr3R 14681329 14681363 chr3R 14681472 14681506 8 143 11.0 24.0 17.5 0.4 177 chr3R 14681329 intron Meltrin - chr3R 14681418 intron Meltrin - chr3R 14681506 intron Meltrin - chr3R_8_14680001 chr3R_14680001 RAL-913 3693 chr3R 14685744 14685791 chr3R 14685875 14685921 6 131 28.5 22.5 25.5 0.2 177 chr3R 14685744 intron Meltrin - chr3R 14685832 intron Meltrin - chr3R 14685921 intron Meltrin - chr3R_6_14685001 chr3R_14685001 RAL-913 3694 chr3R 14704340 14704408 chr3R 14704467 14704535 16 124 32.5 31.0 31.8 0.5 195 chr3R 14704340 intron kibra - chr3R 14704438 intron kibra - chr3R 14704535 intron kibra - chr3R_16_14700001 chr3R_14700001 RAL-913 3695 chr3R 14764519 14764581 chr3R 14764667 14764731 17 149 5.0 8.5 6.8 2.2 212 chr3R 14764519 intron jvl + chr3R 14764625 intron jvl + chr3R 14764731 intron jvl + chr3R_17_14760001 chr3R_14760001 RAL-913 3696 chr3R 14840906 14840933 chr3R 14841039 14841063 9 132 21.5 19.0 20.2 0.4 157 chr3R 14840906 intron btsz - chr3R 14840984 intron btsz - chr3R 14841063 intron btsz - chr3R_9_14840001 chr3R_14840001 RAL-913 3697 chr3R 14840938 14840970 chr3R 14841034 14841106 8 129 20.0 18.5 19.2 0.4 168 chr3R 14840938 intron btsz - chr3R 14841022 intron btsz - chr3R 14841106 intron btsz - chr3R_8_14840001 chr3R_14840001 RAL-913 3698 chr3R 14862802 14862855 chr3R 14862928 14862981 10 126 30.5 28.0 29.2 0.3 179 chr3R 14862802 intron btsz - chr3R 14862892 intron btsz - chr3R 14862981 intron btsz - chr3R_10_14860001 chr3R_14860001 RAL-913 3699 chr3R 14878996 14879055 chr3R 14879130 14879179 7 132 22.0 20.5 21.2 0.3 183 chr3R 14878996 intergenic CG3631 + chr3R 14879088 intergenic CG3631 + chr3R 14879179 intergenic CG3631 + chr3R_7_14875001 chr3R_14875001 RAL-913 3700 chr3R 14882807 14882824 chr3R 14882896 14882956 9 119 27.0 27.5 27.2 0.3 149 chr3R 14882807 intron Rrp6 - chr3R 14882882 intron Rrp6 - chr3R 14882956 exon Rrp6 - chr3R_9_14880001 chr3R_14880001 RAL-913 3701 chr3R 14913866 14913927 chr3R 14913988 14914059 14 125 24.0 22.0 23.0 0.6 193 chr3R 14913866 intergenic not near genes chr3R 14913962 intergenic not near genes chr3R 14914059 intergenic not near genes chr3R_14_14910001 chr3R_14910001 RAL-913 3702 chr3R 14968185 14968259 chr3R 14968331 14968405 11 130 14.5 15.0 14.8 0.7 220 chr3R 14968185 intergenic not near genes chr3R 14968295 intergenic not near genes chr3R 14968405 intergenic not near genes chr3R_11_14965001 chr3R_14965001 RAL-913 3703 chr3R 14971298 14971360 chr3R 14971449 14971501 8 149 17.0 9.0 13.0 0.6 203 chr3R 14971298 intergenic not near genes chr3R 14971400 intergenic not near genes chr3R 14971501 intergenic not near genes chr3R_8_14970001 chr3R_14970001 RAL-913 3704 chr3R 14977275 14977299 chr3R 14977409 14977433 5 134 28.0 27.0 27.5 0.2 158 chr3R 14977275 intergenic not near genes chr3R 14977354 intergenic not near genes chr3R 14977433 intergenic not near genes chr3R_5_14975001 chr3R_14975001 RAL-913 3705 chr3R 14977300 14977335 chr3R 14977404 14977469 6 129 27.0 27.0 27.0 0.2 169 chr3R 14977300 intergenic not near genes chr3R 14977384 intergenic not near genes chr3R 14977469 intergenic not near genes chr3R_6_14975001 chr3R_14975001 RAL-913 3706 chr3R 14982246 14982296 chr3R 14982718 14982768 16 469 30.0 21.5 25.8 0.6 522 chr3R 14982246 intergenic not near genes chr3R 14982507 intergenic not near genes chr3R 14982768 intergenic not near genes chr3R_16_14980001 chr3R_14980001 RAL-913 3707 chr3R 14982772 14982844 chr3R 14982902 14982969 9 128 25.0 29.5 27.2 0.3 197 chr3R 14982772 intergenic not near genes chr3R 14982870 intergenic not near genes chr3R 14982969 intergenic not near genes chr3R_9_14980001 chr3R_14980001 RAL-913 3708 chr3R 14998897 14998957 chr3R 14999039 14999099 7 141 29.0 27.5 28.2 0.2 202 chr3R 14998897 intergenic not near genes chr3R 14998998 intergenic not near genes chr3R 14999099 intergenic not near genes chr3R_7_14995001 chr3R_14995001 RAL-913 3709 chr3R 15006426 15006489 chr3R 15006563 15006626 9 137 30.0 26.5 28.2 0.3 200 chr3R 15006426 intergenic not near genes chr3R 15006526 intergenic not near genes chr3R 15006626 intergenic not near genes chr3R_9_15005001 chr3R_15005001 RAL-913 3710 chr3R 15009109 15009173 chr3R 15009255 15009309 7 144 10.0 12.5 11.2 0.6 200 chr3R 15009109 intergenic not near genes chr3R 15009209 intergenic not near genes chr3R 15009309 intergenic not near genes chr3R_7_15005001 chr3R_15005001 RAL-913 3711 chr3R 15032454 15032463 chr3R 15032591 15032600 4 137 3.0 12.0 7.5 0.5 146 chr3R 15032454 intergenic not near genes chr3R 15032527 intergenic not near genes chr3R 15032600 intergenic not near genes chr3R_4_15030001 chr3R_15030001 RAL-913 3712 chr3R 15041350 15041419 chr3R 15045184 15045253 Doc 15 3831 5.0 5.5 5.2 2.4 3903 chr3R 15041350 intergenic not near genes chr3R 15043302 intergenic not near genes chr3R 15045253 intergenic not near genes chr3R_15_15040001 chr3R_15040001 RAL-913 3713 chr3R 15041443 15041456 chr3R 15045260 15045273 Doc 5 3817 2.0 20.0 11.0 0.4 3830 chr3R 15041443 intergenic not near genes chr3R 15043358 intergenic not near genes chr3R 15045273 intergenic not near genes chr3R_5_15040001 chr3R_15040001 RAL-913 3714 chr3R 15046245 15046308 chr3R 15046375 15046395 7 123 26.5 28.0 27.2 0.2 150 chr3R 15046245 intergenic not near genes chr3R 15046320 intergenic not near genes chr3R 15046395 intergenic not near genes chr3R_7_15045001 chr3R_15045001 RAL-913 3715 chr3R 15059240 15059277 chr3R 15059501 15059536 BS 5 257 17.5 16.5 17.0 0.3 296 chr3R 15059240 intron dpr9 - chr3R 15059388 intron dpr9 - chr3R 15059536 intron dpr9 - chr3R_5_15055001 chr3R_15055001 RAL-913 3716 chr3R 15071157 15071213 chr3R 15071332 15071388 22 175 21.0 29.0 25.0 0.8 231 chr3R 15071157 intron dpr9 - chr3R 15071272 intron dpr9 - chr3R 15071388 intron dpr9 - chr3R_22_15070001 chr3R_15070001 RAL-913 3717 chr3R 15079764 15079777 chr3R 15080055 15080068 pogo 8 291 24.0 4.0 14.0 0.5 304 chr3R 15079764 3` UTR CG6966 - chr3R 15079916 3` UTR CG6966 - chr3R 15080068 3` UTR CG6966 - chr3R_8_15075001 chr3R_15075001 RAL-913 3718 chr3R 15079784 15079837 chr3R 15080054 15080121 pogo 18 286 11.0 4.0 7.5 2.1 337 chr3R 15079784 3` UTR CG6966 - chr3R 15079952 3` UTR CG6966 - chr3R 15080121 3` UTR CG6966 - chr3R_18_15075001 chr3R_15075001 RAL-913 3719 chr3R 15088047 15088102 chr3R 15088195 15088234 10 145 9.5 3.5 6.5 1.3 187 chr3R 15088047 intron CG6966 - chr3R 15088140 intron CG6966 - chr3R 15088234 intron CG6966 - chr3R_10_15085001 chr3R_15085001 RAL-913 3720 chr3R 15102445 15102515 chr3R 15109754 15109820 412 22 7307 19.0 8.0 13.5 1.5 7375 chr3R 15102445 intron CG42788 - chr3R 15106132 intron CG42788 - chr3R 15109820 intron CG42788 - chr3R_22_15105001 chr3R_15105001 RAL-913 3721 chr3R 15114874 15114903 chr3R 15115000 15115029 9 125 35.0 30.0 32.5 0.3 155 chr3R 15114874 intron CG42788 - chr3R 15114952 intron CG42788 - chr3R 15115029 intron CG42788 - chr3R_9_15110001 chr3R_15110001 RAL-913 3722 chr3R 15127746 15127806 chr3R 15127876 15127936 7 128 36.0 28.5 32.2 0.2 190 chr3R 15127746 intron CG42788 - chr3R 15127841 intron CG42788 - chr3R 15127936 intron CG42788 - chr3R_7_15125001 chr3R_15125001 RAL-913 3723 chr3R 15132020 15132078 chr3R 15135130 15135188 Juan 25 3108 8.5 16.5 12.5 1.9 3168 chr3R 15132020 intergenic CG42788 - chr3R 15133604 intergenic not near genes chr3R 15135188 exon CG6912 - chr3R_25_15130001 chr3R_15130001 RAL-913 3724 chr3R 15156169 15156244 chr3R 15156366 15156441 23 197 8.0 3.0 5.5 3.5 272 chr3R 15156169 intron Gyc88E + chr3R 15156305 intron Gyc88E + chr3R 15156441 intron Gyc88E + chr3R_23_15155001 chr3R_15155001 RAL-913 3725 chr3R 15160519 15160588 chr3R 15160667 15160736 19 148 15.5 24.5 20.0 0.9 217 chr3R 15160519 intron Gyc88E + chr3R 15160628 intron Gyc88E + chr3R 15160736 intron Gyc88E + chr3R_19_15160001 chr3R_15160001 RAL-913 3726 chr3R 15162509 15162562 chr3R 15167326 15167380 F-element 22 4817 12.5 11.0 11.8 1.7 4871 chr3R 15162509 intron Gyc88E + chr3R 15164944 intron Gyc88E + chr3R 15167380 intron Gyc88E + chr3R_22_15160001 chr3R_15160001 RAL-913 3727 chr3R 15167776 15167828 chr3R 15167983 15168035 17 207 13.0 16.0 14.5 1.1 259 chr3R 15167776 intron Gyc88E + chr3R 15167906 intron Gyc88E + chr3R 15168035 intron Gyc88E + chr3R_17_15165001 chr3R_15165001 RAL-913 3728 chr3R 15180862 15180877 chr3R 15180998 15181013 4 136 26.0 6.5 16.2 0.2 151 chr3R 15180862 intron Gyc88E + chr3R 15180938 intron Gyc88E + chr3R 15181013 intron Gyc88E + chr3R_4_15180001 chr3R_15180001 RAL-913 3729 chr3R 15184491 15184550 chr3R 15184623 15184682 13 131 20.5 14.5 17.5 0.7 191 chr3R 15184491 intron Gyc88E + chr3R 15184586 intron Gyc88E + chr3R 15184682 intron Gyc88E + chr3R_13_15180001 chr3R_15180001 RAL-913 3730 chr3R 15190616 15190668 chr3R 15190791 15190843 9 174 36.5 33.5 35.0 0.2 227 chr3R 15190616 3` UTR Gyc88E + chr3R 15190730 3` UTR Gyc88E + chr3R 15190843 3` UTR Gyc88E + chr3R_9_15190001 chr3R_15190001 RAL-913 3731 chr3R 15257519 15257595 chr3R 15257648 15257708 17 128 28.0 27.0 27.5 0.6 189 chr3R 15257519 3` UTR CG42404 + chr3R 15257614 3` UTR CG42404 + chr3R 15257708 3` UTR CG42404 + chr3R_17_15255001 chr3R_15255001 RAL-913 3732 chr3R 15302460 15302520 chr3R 15302588 15302648 14 128 31.5 29.0 30.2 0.4 188 chr3R 15302460 intron Tm1 + chr3R 15302554 intron Tm1 + chr3R 15302648 intron Tm1 + chr3R_14_15300001 chr3R_15300001 RAL-913 3733 chr3R 15325093 15325145 chr3R 15325238 15325287 9 144 37.5 36.5 37.0 0.2 194 chr3R 15325093 3` UTR ear + chr3R 15325190 3` UTR ear + chr3R 15325287 intergenic ear +,CG6236 - chr3R_9_15325001 chr3R_15325001 RAL-913 3734 chr3R 15406096 15406144 chr3R 15406227 15406275 11 131 31.5 27.5 29.5 0.4 179 chr3R 15406096 intron CG6125 - chr3R 15406186 intron CG6125 - chr3R 15406275 intron CG6125 - chr3R_11_15405001 chr3R_15405001 RAL-913 3735 chr3R 15445866 15445903 chr3R 15446001 15446038 21 135 14.5 8.5 11.5 1.7 172 chr3R 15445866 exon AdamTS-A - chr3R 15445952 intron AdamTS-A - chr3R 15446038 intron AdamTS-A - chr3R_21_15445001 chr3R_15445001 RAL-913 3736 chr3R 15531592 15531611 chr3R 15531815 15531834 5 223 30.5 23.0 26.8 0.2 242 chr3R 15531592 intergenic CG31296 - chr3R 15531713 intergenic CG31296 -,CG18522 - chr3R 15531834 intergenic CG18522 -,CG31296 - chr3R_5_15530001 chr3R_15530001 RAL-913 3737 chr3R 15531617 15531657 chr3R 15531807 15531880 4 215 23.0 23.5 23.2 0.2 263 chr3R 15531617 intergenic CG31296 - chr3R 15531748 intergenic CG31296 -,CG18522 - chr3R 15531880 intergenic CG18522 -,CG31296 - chr3R_4_15530001 chr3R_15530001 RAL-913 3738 chr3R 15573739 15573787 chr3R 15573900 15573948 8 158 18.5 15.0 16.8 0.4 209 chr3R 15573739 intergenic not near genes chr3R 15573844 intergenic not near genes chr3R 15573948 intergenic not near genes chr3R_8_15570001 chr3R_15570001 RAL-913 3739 chr3R 15578034 15578060 chr3R 15578178 15578200 6 142 16.5 13.5 15.0 0.4 166 chr3R 15578034 intergenic not near genes chr3R 15578117 intergenic not near genes chr3R 15578200 intergenic not near genes chr3R_6_15575001 chr3R_15575001 RAL-913 3740 chr3R 15592842 15592919 chr3R 15592976 15593053 24 134 21.5 19.5 20.5 1.1 211 chr3R 15592842 intergenic not near genes chr3R 15592948 intergenic not near genes chr3R 15593053 intergenic not near genes chr3R_24_15590001 chr3R_15590001 RAL-913 3741 chr3R 15594654 15594674 chr3R 15594787 15594807 13 133 0.0 18.0 9.0 1.3 153 chr3R 15594654 intergenic not near genes chr3R 15594730 intergenic not near genes chr3R 15594807 intergenic not near genes chr3R_13_15590001 chr3R_15590001 RAL-913 3742 chr3R 15601127 15601176 chr3R 15608699 15608747 412 19 7569 15.0 13.0 14.0 1.3 7620 chr3R 15601127 intergenic not near genes chr3R 15604937 intergenic not near genes chr3R 15608747 intergenic not near genes chr3R_19_15600001 chr3R_15600001 RAL-913 3743 chr3R 15601177 15601192 chr3R 15608695 15608764 412 7 7564 10.5 11.5 11.0 0.6 7587 chr3R 15601177 intergenic not near genes chr3R 15604970 intergenic not near genes chr3R 15608764 intergenic not near genes chr3R_7_15600001 chr3R_15600001 RAL-913 3744 chr3R 15618705 15618759 chr3R 15626229 15626283 blood 18 7523 6.0 16.5 11.2 1.5 7578 chr3R 15618705 intergenic not near genes chr3R 15622494 intergenic not near genes chr3R 15626283 intergenic not near genes chr3R_18_15620001 chr3R_15620001 RAL-913 3745 chr3R 15635167 15635239 chr3R 15635318 15635390 13 151 29.5 30.5 30.0 0.4 223 chr3R 15635167 intergenic CG43335 + chr3R 15635278 intergenic CG43335 + chr3R 15635390 intergenic CG43335 + chr3R_13_15635001 chr3R_15635001 RAL-913 3746 chr3R 15646740 15646800 chr3R 15646873 15646933 19 133 10.0 7.5 8.8 1.9 193 chr3R 15646740 intergenic not near genes chr3R 15646836 intergenic not near genes chr3R 15646933 intergenic not near genes chr3R_19_15645001 chr3R_15645001 RAL-913 3747 chr3R 15658257 15658313 chr3R 15658396 15658452 11 136 26.5 24.0 25.2 0.4 195 chr3R 15658257 intergenic not near genes chr3R 15658354 intergenic not near genes chr3R 15658452 intergenic not near genes chr3R_11_15655001 chr3R_15655001 RAL-913 3748 chr3R 15664487 15664526 chr3R 15664616 15664655 11 129 21.0 18.0 19.5 0.5 168 chr3R 15664487 intergenic not near genes chr3R 15664571 intergenic not near genes chr3R 15664655 intergenic not near genes chr3R_11_15660001 chr3R_15660001 RAL-913 3749 chr3R 15676501 15676576 chr3R 15676630 15676684 11 126 21.0 24.0 22.5 0.5 183 chr3R 15676501 intron pxb + chr3R 15676592 intron pxb + chr3R 15676684 intron pxb + chr3R_11_15675001 chr3R_15675001 RAL-913 3750 chr3R 15691151 15691331 chr3R 15691290 15691467 25 142 0.0 0.0 0.0 25.0 316 chr3R 15691151 intergenic not near genes chr3R 15691309 intergenic not near genes chr3R 15691467 intergenic not near genes chr3R_25_15690001 chr3R_15690001 RAL-913 3751 chr3R 15697415 15697466 chr3R 15697557 15697608 7 134 14.0 22.5 18.2 0.4 193 chr3R 15697415 5` UTR CR45635 + chr3R 15697512 5` UTR CR45635 + chr3R 15697608 5` UTR CR45635 + chr3R_7_15695001 chr3R_15695001 RAL-913 3752 chr3R 15708252 15708318 chr3R 15708380 15708446 4 128 38.5 39.0 38.8 0.1 194 chr3R 15708252 3` UTR CG5404 + chr3R 15708349 3` UTR CG5404 + chr3R 15708446 intergenic CG5404 + chr3R_4_15705001 chr3R_15705001 RAL-913 3753 chr3R 15716793 15716869 chr3R 15716942 15717018 14 147 22.0 21.5 21.8 0.6 225 chr3R 15716793 intergenic CG31294 - chr3R 15716906 intergenic CG31294 - chr3R 15717018 intergenic CG31294 - chr3R_14_15715001 chr3R_15715001 RAL-913 3754 chr3R 15734155 15734171 chr3R 15734296 15734312 4 140 21.5 29.0 25.2 0.2 157 chr3R 15734155 intergenic not near genes chr3R 15734234 intergenic not near genes chr3R 15734312 intergenic not near genes chr3R_4_15730001 chr3R_15730001 RAL-913 3755 chr3R 15734175 15734191 chr3R 15734286 15734332 4 126 19.0 23.0 21.0 0.2 157 chr3R 15734175 intergenic not near genes chr3R 15734254 intergenic not near genes chr3R 15734332 intergenic not near genes chr3R_4_15730001 chr3R_15730001 RAL-913 3756 chr3R 15735194 15735234 chr3R 15739964 15740004 F-element 11 4769 7.0 7.5 7.2 1.3 4810 chr3R 15735194 intergenic not near genes chr3R 15737599 intergenic not near genes chr3R 15740004 intergenic not near genes chr3R_11_15735001 chr3R_15735001 RAL-913 3757 chr3R 15758862 15758928 chr3R 15759121 15759187 17 258 26.5 29.5 28.0 0.6 325 chr3R 15758862 intergenic not near genes chr3R 15759024 intergenic not near genes chr3R 15759187 intergenic not near genes chr3R_17_15755001 chr3R_15755001 RAL-913 3758 chr3R 15760734 15760799 chr3R 15760878 15760943 15 144 16.0 11.0 13.5 1.0 209 chr3R 15760734 intergenic not near genes chr3R 15760838 intergenic not near genes chr3R 15760943 intergenic not near genes chr3R_15_15760001 chr3R_15760001 RAL-913 3759 chr3R 15790090 15790165 chr3R 15790248 15790388 21 165 47.0 43.5 45.2 0.5 298 chr3R 15790090 exon c(3)G - chr3R 15790239 exon c(3)G - chr3R 15790388 exon c(3)G - chr3R_21_15790001 chr3R_15790001 RAL-913 3760 chr3R 15790251 15790395 chr3R 15790572 15790649 26 303 42.0 56.0 49.0 0.5 398 chr3R 15790251 exon c(3)G - chr3R 15790450 exon c(3)G - chr3R 15790649 exon c(3)G - chr3R_26_15790001 chr3R_15790001 RAL-913 3761 chr3R 15790794 15790864 chr3R 15790960 15791030 27 165 47.5 48.0 47.8 0.6 236 chr3R 15790794 exon c(3)G - chr3R 15790912 intron c(3)G - chr3R 15791030 exon c(3)G - chr3R_27_15790001 chr3R_15790001 RAL-913 3762 chr3R 15864005 15864291 chr3R 15864219 15864359 18 152 2.5 16.0 9.2 1.8 354 chr3R 15864005 intron CG31183 - chr3R 15864182 intron CG31183 - chr3R 15864359 intron CG31183 - chr3R_18_15860001 chr3R_15860001 RAL-913 3763 chr3R 15885695 15885760 chr3R 15885971 15886009 22 273 18.0 17.5 17.8 1.2 314 chr3R 15885695 intergenic not near genes chr3R 15885852 intergenic not near genes chr3R 15886009 intergenic not near genes chr3R_22_15885001 chr3R_15885001 RAL-913 3764 chr3R 15892612 15892676 chr3R 15892743 15892807 19 130 19.5 22.5 21.0 0.9 195 chr3R 15892612 intron CG14877 - chr3R 15892710 intron CG14877 - chr3R 15892807 intron CG14877 - chr3R_19_15890001 chr3R_15890001 RAL-913 3765 chr3R 15901115 15901172 chr3R 15901245 15901317 6 142 26.5 23.5 25.0 0.2 202 chr3R 15901115 intron glob1 - chr3R 15901216 intron glob1 - chr3R 15901317 intron glob1 - chr3R_6_15900001 chr3R_15900001 RAL-913 3766 chr3R 15924876 15924954 chr3R 15925014 15925092 4 138 28.5 29.0 28.8 0.1 216 chr3R 15924876 intron CG4221 + chr3R 15924984 intron CG4221 + chr3R 15925092 intron CG4221 + chr3R_4_15920001 chr3R_15920001 RAL-913 3767 chr3R 15937380 15937442 chr3R 15937512 15937522 9 120 12.5 18.5 15.5 0.5 142 chr3R 15937380 intron Sap47 + chr3R 15937451 intron Sap47 + chr3R 15937522 intron Sap47 + chr3R_9_15935001 chr3R_15935001 RAL-913 3768 chr3R 16023811 16023884 chr3R 16023938 16024011 7 118 25.0 22.0 23.5 0.3 200 chr3R 16023811 intergenic not near genes chr3R 16023911 intergenic not near genes chr3R 16024011 intergenic not near genes chr3R_7_16020001 chr3R_16020001 RAL-913 3769 chr3R 16033367 16033419 chr3R 16033498 16033505 10 126 33.0 31.5 32.2 0.3 138 chr3R 16033367 intron pnr + chr3R 16033436 intron pnr + chr3R 16033505 intron pnr + chr3R_10_16030001 chr3R_16030001 RAL-913 3770 chr3R 16048809 16048881 chr3R 16048948 16048990 13 135 12.0 16.0 14.0 0.9 181 chr3R 16048809 exon ird5 - chr3R 16048900 intron ird5 - chr3R 16048990 intron ird5 - chr3R_13_16045001 chr3R_16045001 RAL-913 3771 chr3R 16073394 16073407 chr3R 16073548 16073561 8 154 13.0 4.5 8.8 0.8 167 chr3R 16073394 exon Mhcl - chr3R 16073478 intron Mhcl - chr3R 16073561 intron Mhcl - chr3R_8_16070001 chr3R_16070001 RAL-913 3772 chr3R 16073408 16073469 chr3R 16073546 16073623 23 153 6.5 4.0 5.2 3.7 215 chr3R 16073408 intron Mhcl - chr3R 16073516 intron Mhcl - chr3R 16073623 intron Mhcl - chr3R_23_16070001 chr3R_16070001 RAL-913 3773 chr3R 16116576 16116647 chr3R 16116702 16116779 11 130 12.5 12.5 12.5 0.8 203 chr3R 16116576 intron Sb + chr3R 16116678 intron Sb + chr3R 16116779 intron Sb + chr3R_11_16115001 chr3R_16115001 RAL-913 3774 chr3R 16167779 16167833 chr3R 16167924 16167978 14 145 19.0 26.0 22.5 0.6 199 chr3R 16167779 intron CG6006 + chr3R 16167878 intron CG6006 + chr3R 16167978 exon CG6006 + chr3R_14_16165001 chr3R_16165001 RAL-913 3775 chr3R 16189369 16189441 chr3R 16189822 16189894 invader4 21 452 8.5 8.5 8.5 2.2 525 chr3R 16189369 intron sra + chr3R 16189632 intron sra + chr3R 16189894 intron sra + chr3R_21_16185001 chr3R_16185001 RAL-913 3776 chr3R 16211015 16211047 chr3R 16211144 16211175 12 129 31.0 27.0 29.0 0.4 160 chr3R 16211015 intergenic not near genes chr3R 16211095 intergenic not near genes chr3R 16211175 intergenic not near genes chr3R_12_16210001 chr3R_16210001 RAL-913 3777 chr3R 16212237 16212269 chr3R 16212363 16212395 6 126 21.5 21.0 21.2 0.3 158 chr3R 16212237 intergenic not near genes chr3R 16212316 intergenic not near genes chr3R 16212395 intergenic not near genes chr3R_6_16210001 chr3R_16210001 RAL-913 3778 chr3R 16225043 16225114 chr3R 16225178 16225249 29 135 27.5 18.5 23.0 1.2 206 chr3R 16225043 intergenic not near genes chr3R 16225146 intergenic not near genes chr3R 16225249 intergenic tara + chr3R_29_16225001 chr3R_16225001 RAL-913 3779 chr3R 16226760 16226774 chr3R 16226888 16226902 6 128 25.5 23.0 24.2 0.2 142 chr3R 16226760 intron tara + chr3R 16226831 intron tara + chr3R 16226902 intron tara + chr3R_6_16225001 chr3R_16225001 RAL-913 3780 chr3R 16253504 16253517 chr3R 16253640 16253653 6 136 24.0 9.5 16.8 0.3 149 chr3R 16253504 intron tara + chr3R 16253578 intron tara + chr3R 16253653 intron tara + chr3R_6_16250001 chr3R_16250001 RAL-913 3781 chr3R 16256579 16256611 chr3R 16256731 16256763 6 152 28.0 28.0 28.0 0.2 184 chr3R 16256579 intron tara + chr3R 16256671 intron tara + chr3R 16256763 intron tara + chr3R_6_16255001 chr3R_16255001 RAL-913 3782 chr3R 16260769 16260835 chr3R 16260900 16260965 10 130 27.5 31.0 29.2 0.3 196 chr3R 16260769 intergenic tara + chr3R 16260867 intergenic bor - chr3R 16260965 intergenic bor - chr3R_10_16260001 chr3R_16260001 RAL-913 3783 chr3R 16284891 16284912 chr3R 16284970 16284972 6 105 20.0 20.5 20.2 0.3 81 chr3R 16284891 intron gish + chr3R 16284932 intron gish + chr3R 16284972 intron gish + chr3R_6_16280001 chr3R_16280001 RAL-913 3784 chr3R 16286592 16286645 chr3R 16286762 16286815 8 170 35.5 35.0 35.2 0.2 223 chr3R 16286592 intron gish + chr3R 16286704 intron gish + chr3R 16286815 intron gish + chr3R_8_16285001 chr3R_16285001 RAL-913 3785 chr3R 16327100 16327169 chr3R 16327242 16327314 8 145 38.0 31.5 34.8 0.2 214 chr3R 16327100 intron,exon Sulf1 -,CG17929 + chr3R 16327207 intron,exon Sulf1 -,CG17929 + chr3R 16327314 intron,3` UTR Sulf1 -,CG17929 + chr3R_8_16325001 chr3R_16325001 RAL-913 3786 chr3R 16332729 16332798 chr3R 16333130 16333199 17 397 12.0 23.0 17.5 0.9 470 chr3R 16332729 intron Sulf1 - chr3R 16332964 intron Sulf1 - chr3R 16333199 intron Sulf1 - chr3R_17_16330001 chr3R_16330001 RAL-913 3787 chr3R 16363354 16363410 chr3R 16363655 16363705 6 300 33.0 22.0 27.5 0.2 351 chr3R 16363354 intron CG14880 - chr3R 16363530 intron CG14880 - chr3R 16363705 intron CG14880 - chr3R_6_16360001 chr3R_16360001 RAL-913 3788 chr3R 16370528 16370589 chr3R 16370663 16370709 12 126 26.5 25.0 25.8 0.4 181 chr3R 16370528 5` UTR CG10317 - chr3R 16370618 intergenic CG10317 - chr3R 16370709 intergenic CG10317 - chr3R_12_16370001 chr3R_16370001 RAL-913 3789 chr3R 16374258 16374323 chr3R 16374425 16374475 22 166 10.0 12.0 11.0 1.8 217 chr3R 16374258 intergenic ss - chr3R 16374366 intergenic ss - chr3R 16374475 3` UTR ss - chr3R_22_16370001 chr3R_16370001 RAL-913 3790 chr3R 16472534 16472576 chr3R 16472659 16472702 11 121 13.0 19.0 16.0 0.6 168 chr3R 16472534 intergenic Gyc-89Da + chr3R 16472618 5` UTR Gyc-89Da + chr3R 16472702 5` UTR Gyc-89Da + chr3R_11_16470001 chr3R_16470001 RAL-913 3791 chr3R 16517603 16517643 chr3R 16517729 16517769 7 122 11.5 11.5 11.5 0.6 166 chr3R 16517603 intron CG42342 + chr3R 16517686 intron CG42342 + chr3R 16517769 intron CG42342 + chr3R_7_16515001 chr3R_16515001 RAL-913 3792 chr3R 16519889 16519925 chr3R 16520032 16520068 8 141 30.5 27.0 28.8 0.3 179 chr3R 16519889 intron CG42342 + chr3R 16519978 intron CG42342 + chr3R 16520068 intron CG42342 + chr3R_8_16515001 chr3R_16515001 RAL-913 3793 chr3R 16535485 16535521 chr3R 16535611 16535647 8 124 25.5 27.5 26.5 0.3 162 chr3R 16535485 intron CG42342 + chr3R 16535566 intron CG42342 + chr3R 16535647 intron CG42342 + chr3R_8_16535001 chr3R_16535001 RAL-913 3794 chr3R 16582862 16582918 chr3R 16582991 16583047 17 127 10.0 13.5 11.8 1.3 185 chr3R 16582862 intron Scp2 - chr3R 16582954 intron Scp2 - chr3R 16583047 intron Scp2 - chr3R_17_16580001 chr3R_16580001 RAL-913 3795 chr3R 16620336 16620403 chr3R 16620526 16620593 28 190 0.0 6.5 3.2 6.7 257 chr3R 16620336 intergenic CG14893 +,CG17560 + chr3R 16620464 intergenic CG14893 + chr3R 16620593 intergenic CG14893 + chr3R_28_16620001 chr3R_16620001 RAL-913 3796 chr3R 16633665 16633678 chr3R 16633815 16633828 7 150 18.0 17.5 17.8 0.4 163 chr3R 16633665 intron Fas1 + chr3R 16633746 intron Fas1 + chr3R 16633828 intron Fas1 + chr3R_7_16630001 chr3R_16630001 RAL-913 3797 chr3R 16671195 16671261 chr3R 16671324 16671348 10 124 24.0 23.5 23.8 0.4 153 chr3R 16671195 intron Ubx - chr3R 16671272 intron Ubx - chr3R 16671348 intron Ubx - chr3R_10_16670001 chr3R_16670001 RAL-913 3798 chr3R 16731880 16731947 chr3R 16732011 16732021 18 123 7.0 9.0 8.0 2.0 141 chr3R 16731880 intron Ubx - chr3R 16731950 intron Ubx - chr3R 16732021 intron Ubx - chr3R_18_16730001 chr3R_16730001 RAL-913 3799 chr3R 16734826 16734893 chr3R 16734959 16735026 7 133 21.5 27.0 24.2 0.3 200 chr3R 16734826 intergenic Ubx - chr3R 16734926 intergenic Ubx - chr3R 16735026 intergenic not near genes chr3R_7_16730001 chr3R_16730001 RAL-913 3800 chr3R 16755689 16755752 chr3R 16755815 16755878 14 126 19.0 11.0 15.0 0.9 189 chr3R 16755689 intron bxd - chr3R 16755784 intron bxd - chr3R 16755878 intron bxd - chr3R_14_16755001 chr3R_16755001 RAL-913 3801 chr3R 16756283 16756295 chr3R 16762514 16762536 diver 7 6240 12.5 8.5 10.5 0.6 6253 chr3R 16756283 intron bxd - chr3R 16759410 intron bxd - chr3R 16762536 intron bxd - chr3R_7_16755001 chr3R_16755001 RAL-913 3802 chr3R 16756299 16756344 chr3R 16762513 16762565 diver 11 6233 7.0 8.5 7.8 1.2 6266 chr3R 16756299 intron bxd - chr3R 16759432 intron bxd - chr3R 16762565 intron bxd - chr3R_11_16755001 chr3R_16755001 RAL-913 3803 chr3R 16786787 16786829 chr3R 16786921 16786963 8 134 22.5 23.5 23.0 0.3 176 chr3R 16786787 intergenic not near genes chr3R 16786875 intergenic not near genes chr3R 16786963 intergenic not near genes chr3R_8_16785001 chr3R_16785001 RAL-913 3804 chr3R 16790092 16790143 chr3R 16790263 16790329 13 180 23.0 24.5 23.8 0.5 237 chr3R 16790092 intergenic Glut3 + chr3R 16790210 intergenic Glut3 + chr3R 16790329 intergenic Glut3 + chr3R_13_16790001 chr3R_16790001 RAL-913 3805 chr3R 16802082 16802153 chr3R 16802213 16802280 10 129 18.5 19.0 18.8 0.5 198 chr3R 16802082 intergenic CR45751 + chr3R 16802181 intergenic CR45751 + chr3R 16802280 intergenic CR45751 + chr3R_10_16800001 chr3R_16800001 RAL-913 3806 chr3R 16806228 16806266 chr3R 16806411 16806413 6 180 17.0 19.0 18.0 0.3 185 chr3R 16806228 intergenic not near genes chr3R 16806320 intergenic not near genes chr3R 16806413 intergenic not near genes chr3R_6_16805001 chr3R_16805001 RAL-913 3807 chr3R 16816293 16816346 chr3R 16816503 16816567 8 214 19.5 19.5 19.5 0.4 274 chr3R 16816293 intron abd-A - chr3R 16816430 intron abd-A - chr3R 16816567 intron abd-A - chr3R_8_16815001 chr3R_16815001 RAL-913 3808 chr3R 16820203 16820279 chr3R 16820347 16820423 37 144 21.0 17.5 19.2 1.8 220 chr3R 16820203 intron abd-A - chr3R 16820313 intron abd-A - chr3R 16820423 intron abd-A - chr3R_37_16820001 chr3R_16820001 RAL-913 3809 chr3R 16856562 16856632 chr3R 16856721 16856793 7 160 19.0 19.5 19.2 0.3 231 chr3R 16856562 intron iab-8 - chr3R 16856678 intron iab-8 - chr3R 16856793 intron iab-8 - chr3R_7_16855001 chr3R_16855001 RAL-913 3810 chr3R 16860289 16860335 chr3R 16860417 16860463 9 125 12.0 0.0 6.0 1.3 174 chr3R 16860289 intron iab-8 - chr3R 16860376 intron iab-8 - chr3R 16860463 intron iab-8 - chr3R_9_16860001 chr3R_16860001 RAL-913 3811 chr3R 16900362 16900432 chr3R 16900795 16900811 8 426 27.0 20.0 23.5 0.3 449 chr3R 16900362 intron iab-8 - chr3R 16900586 intron iab-8 - chr3R 16900811 intron iab-8 - chr3R_8_16900001 chr3R_16900001 RAL-913 3812 chr3R 16921794 16921858 chr3R 16921928 16921992 17 132 18.5 14.5 16.5 1.0 198 chr3R 16921794 intron iab-8 - chr3R 16921893 intron iab-8 - chr3R 16921992 intron iab-8 - chr3R_17_16920001 chr3R_16920001 RAL-913 3813 chr3R 16936910 16936969 chr3R 16937056 16937115 10 146 28.5 32.5 30.5 0.3 205 chr3R 16936910 intron Abd-B - chr3R 16937012 intron Abd-B - chr3R 16937115 intron Abd-B - chr3R_10_16935001 chr3R_16935001 RAL-913 3814 chr3R 17015002 17015064 chr3R 17015170 17015232 24 168 17.5 12.0 14.8 1.5 230 chr3R 17015002 intron Pxd + chr3R 17015117 intron Pxd + chr3R 17015232 intron Pxd + chr3R_24_17015001 chr3R_17015001 RAL-913 3815 chr3R 17023946 17023993 chr3R 17024149 17024180 9 201 6.5 0.0 3.2 2.1 234 chr3R 17023946 intron Pxd + chr3R 17024063 intron Pxd + chr3R 17024180 intron Pxd + chr3R_9_17020001 chr3R_17020001 RAL-913 3816 chr3R 17027596 17027664 chr3R 17030896 17030964 13 3302 48.0 53.5 50.8 0.3 3368 chr3R 17027596 intron Pxd + chr3R 17029280 exon CG5225 + chr3R 17030964 intergenic CG5225 + chr3R_13_17025001 chr3R_17025001 RAL-913 3817 chr3R 17082053 17082109 chr3R 17082182 17082238 8 122 27.0 30.0 28.5 0.3 185 chr3R 17082053 intron kuk + chr3R 17082146 intron kuk + chr3R 17082238 intron kuk + chr3R_8_17080001 chr3R_17080001 RAL-913 3818 chr3R 17129122 17129174 chr3R 17129254 17129306 6 132 31.5 29.0 30.2 0.2 184 chr3R 17129122 intergenic CG31265 +,CG17475 - chr3R 17129214 intergenic CG31265 +,CG17475 - chr3R 17129306 intergenic CG17475 -,CG31265 + chr3R_6_17125001 chr3R_17125001 RAL-913 3819 chr3R 17175692 17175762 chr3R 17175874 17175944 10 182 21.5 25.5 23.5 0.4 252 chr3R 17175692 intron Mur89F - chr3R 17175818 intron Mur89F - chr3R 17175944 intron Mur89F - chr3R_10_17175001 chr3R_17175001 RAL-913 3820 chr3R 17184689 17184747 chr3R 17184815 17184873 8 126 29.0 31.0 30.0 0.3 184 chr3R 17184689 intron Mur89F - chr3R 17184781 intron Mur89F - chr3R 17184873 intron Mur89F - chr3R_8_17180001 chr3R_17180001 RAL-913 3821 chr3R 17194363 17194432 chr3R 17194492 17194549 16 125 9.5 12.5 11.0 1.3 186 chr3R 17194363 intron Mur89F - chr3R 17194456 intron Mur89F - chr3R 17194549 intron Mur89F - chr3R_16_17190001 chr3R_17190001 RAL-913 3822 chr3R 17198496 17198541 chr3R 17198609 17198670 5 123 22.0 26.0 24.0 0.2 174 chr3R 17198496 intron Mur89F - chr3R 17198583 intron Mur89F - chr3R 17198670 intron Mur89F - chr3R_5_17195001 chr3R_17195001 RAL-913 3823 chr3R 17209668 17209703 chr3R 17209806 17209841 8 138 26.5 26.0 26.2 0.3 173 chr3R 17209668 intergenic not near genes chr3R 17209754 intergenic not near genes chr3R 17209841 intergenic not near genes chr3R_8_17205001 chr3R_17205001 RAL-913 3824 chr3R 17268623 17268700 chr3R 17268795 17268826 13 168 25.0 28.0 26.5 0.5 203 chr3R 17268623 intergenic not near genes chr3R 17268724 intergenic not near genes chr3R 17268826 intergenic not near genes chr3R_13_17265001 chr3R_17265001 RAL-913 3825 chr3R 17294635 17294705 chr3R 17295096 17295188 BS 27 475 6.0 4.5 5.2 4.4 553 chr3R 17294635 intergenic not near genes chr3R 17294912 intergenic not near genes chr3R 17295188 intergenic not near genes chr3R_27_17290001 chr3R_17290001 RAL-913 3826 chr3R 17313322 17313398 chr3R 17313494 17313570 16 170 24.5 22.0 23.2 0.7 248 chr3R 17313322 intergenic not near genes chr3R 17313446 intergenic not near genes chr3R 17313570 intergenic not near genes chr3R_16_17310001 chr3R_17310001 RAL-913 3827 chr3R 17326460 17326503 chr3R 17326592 17326635 4 132 19.0 9.5 14.2 0.3 175 chr3R 17326460 intron beat-IIa - chr3R 17326548 intron beat-IIa - chr3R 17326635 intron beat-IIa - chr3R_4_17325001 chr3R_17325001 RAL-913 3828 chr3R 17329834 17329894 chr3R 17329984 17330041 6 149 22.0 22.0 22.0 0.3 207 chr3R 17329834 intron beat-IIa - chr3R 17329938 intron beat-IIa - chr3R 17330041 intron beat-IIa - chr3R_6_17325001 chr3R_17325001 RAL-913 3829 chr3R 17346656 17346708 chr3R 17348269 17348321 F-element 26 1613 7.0 9.0 8.0 2.9 1665 chr3R 17346656 intron beat-IIa - chr3R 17347488 intron beat-IIa - chr3R 17348321 intron beat-IIa - chr3R_26_17345001 chr3R_17345001 RAL-913 3830 chr3R 17353407 17353474 chr3R 17353534 17353601 12 123 14.0 10.0 12.0 0.9 194 chr3R 17353407 intron beat-IIa - chr3R 17353504 intron beat-IIa - chr3R 17353601 intron beat-IIa - chr3R_12_17350001 chr3R_17350001 RAL-913 3831 chr3R 17384371 17384390 chr3R 17384579 17384598 6 208 14.5 9.5 12.0 0.5 227 chr3R 17384371 intron,intron Brf -,lute + chr3R 17384484 intron,intron Brf -,lute + chr3R 17384598 intron,intron Brf -,lute + chr3R_6_17380001 chr3R_17380001 RAL-913 3832 chr3R 17461157 17461221 chr3R 17461289 17461353 16 132 15.0 19.0 17.0 0.9 196 chr3R 17461157 intergenic not near genes chr3R 17461255 intergenic not near genes chr3R 17461353 intergenic not near genes chr3R_16_17460001 chr3R_17460001 RAL-913 3833 chr3R 17467475 17467514 chr3R 17467588 17467629 12 120 16.0 14.0 15.0 0.8 154 chr3R 17467475 intergenic not near genes chr3R 17467552 intergenic not near genes chr3R 17467629 intergenic not near genes chr3R_12_17465001 chr3R_17465001 RAL-913 3834 chr3R 17469484 17469520 chr3R 17469628 17469670 9 149 21.5 20.5 21.0 0.4 186 chr3R 17469484 intergenic not near genes chr3R 17469577 intergenic not near genes chr3R 17469670 intergenic not near genes chr3R_9_17465001 chr3R_17465001 RAL-913 3835 chr3R 17509214 17509249 chr3R 17516805 17516838 412 9 7589 6.0 17.0 11.5 0.7 7624 chr3R 17509214 intergenic not near genes chr3R 17513026 intergenic not near genes chr3R 17516838 intergenic not near genes chr3R_9_17510001 chr3R_17510001 RAL-913 3836 chr3R 17524865 17524930 chr3R 17524993 17525055 9 127 1.5 7.5 4.5 1.6 190 chr3R 17524865 intergenic not near genes chr3R 17524960 intergenic not near genes chr3R 17525055 intergenic not near genes chr3R_9_17520001 chr3R_17520001 RAL-913 3837 chr3R 17591251 17591262 chr3R 17591737 17591747 F-element 5 486 16.5 15.0 15.8 0.3 496 chr3R 17591251 intergenic not near genes chr3R 17591499 intergenic not near genes chr3R 17591747 intergenic not near genes chr3R_5_17590001 chr3R_17590001 RAL-913 3838 chr3R 17591269 17591303 chr3R 17591728 17591752 F-element 13 476 11.5 11.5 11.5 1.0 483 chr3R 17591269 intergenic not near genes chr3R 17591510 intergenic not near genes chr3R 17591752 intergenic not near genes chr3R_13_17590001 chr3R_17590001 RAL-913 3839 chr3R 17593000 17593057 chr3R 17593187 17593244 9 187 12.0 18.0 15.0 0.6 244 chr3R 17593000 intergenic not near genes chr3R 17593122 intergenic not near genes chr3R 17593244 intergenic not near genes chr3R_9_17590001 chr3R_17590001 RAL-913 3840 chr3R 17624927 17624973 chr3R 17625053 17625099 8 126 25.5 32.0 28.8 0.3 172 chr3R 17624927 intergenic AttD + chr3R 17625013 intergenic AttD + chr3R 17625099 intergenic AttD + chr3R_8_17625001 chr3R_17625001 RAL-913 3841 chr3R 17634333 17634390 chr3R 17634459 17634486 4 115 24.0 18.0 21.0 0.2 153 chr3R 17634333 intron CG43175 + chr3R 17634410 intron CG43175 + chr3R 17634486 intron CG43175 + chr3R_4_17630001 chr3R_17630001 RAL-913 3842 chr3R 17638273 17638340 chr3R 17638805 17638875 roo 12 535 0.0 10.5 5.2 1.9 602 chr3R 17638273 intron CG43175 + chr3R 17638574 intron CG43175 + chr3R 17638875 intron,intron CG43175 +,CR45222 + chr3R_12_17635001 chr3R_17635001 RAL-913 3843 chr3R 17645676 17645690 chr3R 17645856 17645870 5 180 23.5 23.0 23.2 0.2 194 chr3R 17645676 intergenic CG43175 + chr3R 17645773 intergenic not near genes chr3R 17645870 intergenic not near genes chr3R_5_17645001 chr3R_17645001 RAL-913 3844 chr3R 17653031 17653110 chr3R 17653171 17653250 19 139 15.0 13.5 14.2 1.2 219 chr3R 17653031 intron,intron CG14322 +,CR45223 - chr3R 17653140 intron,intron CG14322 +,CR45223 - chr3R 17653250 intron,intron CG14322 +,CR45223 - chr3R_19_17650001 chr3R_17650001 RAL-913 3845 chr3R 17701347 17701390 chr3R 17701473 17701500 9 128 19.0 11.0 15.0 0.6 153 chr3R 17701347 intron osa - chr3R 17701424 intron osa - chr3R 17701500 intron osa - chr3R_9_17700001 chr3R_17700001 RAL-913 3846 chr3R 17726207 17726261 chr3R 17726349 17726403 11 139 23.0 23.0 23.0 0.5 196 chr3R 17726207 intron Lgr1 + chr3R 17726305 intron Lgr1 + chr3R 17726403 intron Lgr1 + chr3R_11_17725001 chr3R_17725001 RAL-913 3847 chr3R 17728833 17728878 chr3R 17728976 17729021 12 143 20.0 20.5 20.2 0.6 188 chr3R 17728833 intron Lgr1 + chr3R 17728927 intron Lgr1 + chr3R 17729021 intron Lgr1 + chr3R_12_17725001 chr3R_17725001 RAL-913 3848 chr3R 17734083 17734095 chr3R 17734222 17734232 5 139 16.5 17.0 16.8 0.3 149 chr3R 17734083 exon CG14321 + chr3R 17734158 3` UTR CG14321 + chr3R 17734232 3` UTR CG14321 + chr3R_5_17730001 chr3R_17730001 RAL-913 3849 chr3R 17734096 17734134 chr3R 17734216 17734273 6 133 5.0 13.5 9.2 0.6 177 chr3R 17734096 3` UTR CG14321 + chr3R 17734184 3` UTR CG14321 + chr3R 17734273 3` UTR CG14321 + chr3R_6_17730001 chr3R_17730001 RAL-913 3850 chr3R 17734793 17734859 chr3R 17734956 17735022 25 163 9.0 7.5 8.2 2.7 229 chr3R 17734793 intergenic CG14321 + chr3R 17734908 intergenic not near genes chr3R 17735022 intergenic not near genes chr3R_25_17730001 chr3R_17730001 RAL-913 3851 chr3R 17767304 17767373 chr3R 17767469 17767536 13 167 10.0 13.0 11.5 1.0 232 chr3R 17767304 intergenic not near genes chr3R 17767420 intergenic not near genes chr3R 17767536 intergenic not near genes chr3R_13_17765001 chr3R_17765001 RAL-913 3852 chr3R 17768003 17768060 chr3R 17768157 17768214 20 153 32.5 29.0 30.8 0.6 211 chr3R 17768003 intergenic CG43102 - chr3R 17768108 intergenic CG43102 - chr3R 17768214 intergenic CG43102 - chr3R_20_17765001 chr3R_17765001 RAL-913 3853 chr3R 17773326 17773392 chr3R 17773471 17773522 16 140 5.5 11.5 8.5 1.7 196 chr3R 17773326 exon CG43102 - chr3R 17773424 intron CG43102 - chr3R 17773522 exon CG43102 - chr3R_16_17770001 chr3R_17770001 RAL-913 3854 chr3R 17818853 17818912 chr3R 17818982 17819041 13 128 30.5 32.0 31.2 0.4 188 chr3R 17818853 intron tinc + chr3R 17818947 intron tinc + chr3R 17819041 intron tinc + chr3R_13_17815001 chr3R_17815001 RAL-913 3855 chr3R 17823161 17823223 chr3R 17823288 17823350 17 127 21.0 23.5 22.2 0.7 189 chr3R 17823161 intron tinc + chr3R 17823256 intron tinc + chr3R 17823350 intron tinc + chr3R_17_17820001 chr3R_17820001 RAL-913 3856 chr3R 17825868 17825931 chr3R 17825997 17826063 14 130 0.0 6.5 3.2 3.3 195 chr3R 17825868 intron tinc + chr3R 17825966 intron tinc + chr3R 17826063 intron tinc + chr3R_14_17825001 chr3R_17825001 RAL-913 3857 chr3R 17842028 17842036 chr3R 17842378 17842392 6 355 33.5 6.5 20.0 0.3 364 chr3R 17842028 intron tinc + chr3R 17842210 intron tinc + chr3R 17842392 intron tinc + chr3R_6_17840001 chr3R_17840001 RAL-913 3858 chr3R 17842039 17842092 chr3R 17842373 17842391 5 341 28.0 6.0 17.0 0.3 352 chr3R 17842039 intron tinc + chr3R 17842215 intron tinc + chr3R 17842391 intron tinc + chr3R_5_17840001 chr3R_17840001 RAL-913 3859 chr3R 17845088 17845215 chr3R 17845220 17845332 4 113 13.0 12.0 12.5 0.3 244 chr3R 17845088 intron tinc + chr3R 17845210 intron tinc + chr3R 17845332 intron tinc + chr3R_4_17845001 chr3R_17845001 RAL-913 3860 chr3R 17853842 17853889 chr3R 17855746 17855793 13 1903 28.0 24.0 26.0 0.5 1951 chr3R 17853842 intron tinc + chr3R 17854818 intron tinc + chr3R 17855793 intron tinc + chr3R_13_17850001 chr3R_17850001 RAL-913 3861 chr3R 17855999 17856046 chr3R 17856144 17856189 14 146 13.5 6.0 9.8 1.3 190 chr3R 17855999 intron tinc + chr3R 17856094 intron tinc + chr3R 17856189 intron tinc + chr3R_14_17855001 chr3R_17855001 RAL-913 3862 chr3R 17891779 17891798 chr3R 17891941 17891960 4 162 26.0 24.5 25.2 0.2 181 chr3R 17891779 intron Rim - chr3R 17891870 intron Rim - chr3R 17891960 intron Rim - chr3R_4_17890001 chr3R_17890001 RAL-913 3863 chr3R 17895320 17895368 chr3R 17895461 17895509 16 141 30.5 35.0 32.8 0.5 189 chr3R 17895320 intron Rim - chr3R 17895414 intron Rim - chr3R 17895509 intron Rim - chr3R_16_17895001 chr3R_17895001 RAL-913 3864 chr3R 17898329 17898348 chr3R 17898457 17898479 6 131 16.5 18.0 17.2 0.3 150 chr3R 17898329 intron Rim - chr3R 17898404 intron Rim - chr3R 17898479 intron Rim - chr3R_6_17895001 chr3R_17895001 RAL-913 3865 chr3R 17899046 17899059 chr3R 17899174 17899187 5 128 19.0 19.0 19.0 0.2 141 chr3R 17899046 intron Rim - chr3R 17899116 intron Rim - chr3R 17899187 intron Rim - chr3R_5_17895001 chr3R_17895001 RAL-913 3866 chr3R 17903064 17903077 chr3R 17903202 17903215 6 138 26.0 30.5 28.2 0.2 151 chr3R 17903064 intron Rim - chr3R 17903140 intron Rim - chr3R 17903215 intron Rim - chr3R_6_17900001 chr3R_17900001 RAL-913 3867 chr3R 17903079 17903124 chr3R 17903201 17903262 13 137 28.5 30.5 29.5 0.4 183 chr3R 17903079 intron Rim - chr3R 17903170 intron Rim - chr3R 17903262 intron Rim - chr3R_13_17900001 chr3R_17900001 RAL-913 3868 chr3R 17912783 17912826 chr3R 17912914 17912957 11 131 22.0 14.0 18.0 0.6 174 chr3R 17912783 intron Rim - chr3R 17912870 intron Rim - chr3R 17912957 intron Rim - chr3R_11_17910001 chr3R_17910001 RAL-913 3869 chr3R 17922920 17922986 chr3R 17923053 17923119 8 133 27.0 28.0 27.5 0.3 199 chr3R 17922920 intron cpo + chr3R 17923020 intron cpo + chr3R 17923119 intron cpo + chr3R_8_17920001 chr3R_17920001 RAL-913 3870 chr3R 17925818 17925870 chr3R 17927328 17927362 hobo 11 1512 9.0 10.0 9.5 1.0 1544 chr3R 17925818 intron cpo + chr3R 17926590 intron cpo + chr3R 17927362 intron cpo + chr3R_11_17925001 chr3R_17925001 RAL-913 3871 chr3R 17966298 17966303 chr3R 17966425 17966430 5 127 23.5 12.5 18.0 0.3 132 chr3R 17966298 intron cpo + chr3R 17966364 intron cpo + chr3R 17966430 intron cpo + chr3R_5_17965001 chr3R_17965001 RAL-913 3872 chr3R 18014207 18014249 chr3R 18014339 18014381 12 131 14.5 23.5 19.0 0.6 174 chr3R 18014207 3` UTR cpo + chr3R 18014294 3` UTR cpo + chr3R 18014381 3` UTR cpo + chr3R_12_18010001 chr3R_18010001 RAL-913 3873 chr3R 18025284 18025356 chr3R 18025415 18025486 22 130 6.0 4.0 5.0 3.7 202 chr3R 18025284 exon CG7794 + chr3R 18025385 intergenic CG7794 + chr3R 18025486 intergenic CG7794 + chr3R_22_18025001 chr3R_18025001 RAL-913 3874 chr3R 18030200 18030269 chr3R 18030314 18030361 5 114 12.5 18.0 15.2 0.3 161 chr3R 18030200 intergenic not near genes chr3R 18030280 intergenic not near genes chr3R 18030361 intergenic not near genes chr3R_5_18030001 chr3R_18030001 RAL-913 3875 chr3R 18032738 18032744 chr3R 18040456 18040462 opus 5 7718 23.0 0.0 11.5 0.4 7724 chr3R 18032738 intergenic not near genes chr3R 18036600 intergenic not near genes chr3R 18040462 intergenic not near genes chr3R_5_18035001 chr3R_18035001 RAL-913 3876 chr3R 18032747 18032805 chr3R 18040454 18040534 opus 18 7718 10.0 0.0 5.0 3.0 7787 chr3R 18032747 intergenic not near genes chr3R 18036640 intergenic not near genes chr3R 18040534 intergenic not near genes chr3R_18_18035001 chr3R_18035001 RAL-913 3877 chr3R 18058347 18058550 chr3R 18058504 18058709 10 148 2.0 9.0 5.5 1.5 362 chr3R 18058347 intergenic not near genes chr3R 18058528 intergenic not near genes chr3R 18058709 intergenic not near genes chr3R_10_18055001 chr3R_18055001 RAL-913 3878 chr3R 18061397 18061448 chr3R 18061535 18061590 15 142 23.5 12.0 17.8 0.8 193 chr3R 18061397 intergenic not near genes chr3R 18061494 intergenic not near genes chr3R 18061590 intergenic not near genes chr3R_15_18060001 chr3R_18060001 RAL-913 3879 chr3R 18061546 18061602 chr3R 18063164 18063220 F-element 20 1619 5.5 5.5 5.5 3.1 1674 chr3R 18061546 intergenic not near genes chr3R 18062383 intergenic not near genes chr3R 18063220 intergenic not near genes chr3R_20_18060001 chr3R_18060001 RAL-913 3880 chr3R 18078109 18078152 chr3R 18078238 18078281 11 129 18.0 0.0 9.0 1.1 172 chr3R 18078109 intergenic not near genes chr3R 18078195 intergenic not near genes chr3R 18078281 intergenic not near genes chr3R_11_18075001 chr3R_18075001 RAL-913 3881 chr3R 18088336 18088399 chr3R 18088469 18088530 8 133 33.5 30.0 31.8 0.2 194 chr3R 18088336 intergenic not near genes chr3R 18088433 intergenic not near genes chr3R 18088530 intergenic not near genes chr3R_8_18085001 chr3R_18085001 RAL-913 3882 chr3R 18094227 18094230 chr3R 22687489 22687492 5 4593262 8.5 11.0 9.8 0.5 4593265 chr3R 18094227 intron sr + chr3R 20390860 intron Gfrl - chr3R 22687492 intergenic wfs1 -,CG17625 + chr3R_5_20390001 chr3R_20390001 RAL-913 3883 chr3R 18103860 18103872 chr3R 18103986 18103998 6 126 5.5 9.0 7.2 0.7 138 chr3R 18103860 intron sr + chr3R 18103929 intron sr + chr3R 18103998 intron sr + chr3R_6_18100001 chr3R_18100001 RAL-913 3884 chr3R 18107118 18107136 chr3R 18107251 18107269 4 133 19.0 26.5 22.8 0.2 151 chr3R 18107118 intron sr + chr3R 18107194 intron sr + chr3R 18107269 intron sr + chr3R_4_18105001 chr3R_18105001 RAL-913 3885 chr3R 18109223 18109289 chr3R 18109363 18109414 16 136 19.0 20.0 19.5 0.8 191 chr3R 18109223 intron sr + chr3R 18109318 intron sr + chr3R 18109414 intron sr + chr3R_16_18105001 chr3R_18105001 RAL-913 3886 chr3R 18117374 18117413 chr3R 18117500 18117539 14 126 11.5 12.5 12.0 1.1 165 chr3R 18117374 intron sr + chr3R 18117456 intron sr + chr3R 18117539 intron sr + chr3R_14_18115001 chr3R_18115001 RAL-913 3887 chr3R 18119699 18119754 chr3R 18119826 18119881 17 127 5.5 11.5 8.5 1.8 182 chr3R 18119699 intron sr + chr3R 18119790 intron sr + chr3R 18119881 intron sr + chr3R_17_18115001 chr3R_18115001 RAL-913 3888 chr3R 18122844 18122912 chr3R 18122972 18123039 21 127 9.0 8.0 8.5 2.2 195 chr3R 18122844 intron sr + chr3R 18122942 intron sr + chr3R 18123039 intron sr + chr3R_21_18120001 chr3R_18120001 RAL-913 3889 chr3R 18143529 18143587 chr3R 18143668 18143726 24 139 20.0 21.5 20.8 1.1 197 chr3R 18143529 intergenic not near genes chr3R 18143628 intergenic not near genes chr3R 18143726 intergenic not near genes chr3R_24_18140001 chr3R_18140001 RAL-913 3890 chr3R 18145023 18145072 chr3R 18145151 18145200 10 128 12.5 13.5 13.0 0.7 177 chr3R 18145023 intergenic not near genes chr3R 18145112 intergenic not near genes chr3R 18145200 intergenic not near genes chr3R_10_18145001 chr3R_18145001 RAL-913 3891 chr3R 18157562 18157577 chr3R 18157719 18157734 4 157 14.0 22.0 18.0 0.2 172 chr3R 18157562 intergenic CR45103 + chr3R 18157648 intergenic CR45103 + chr3R 18157734 5` UTR CR45103 + chr3R_4_18155001 chr3R_18155001 RAL-913 3892 chr3R 18209902 18209951 chr3R 18210221 18210270 8 317 19.5 25.5 22.5 0.3 368 chr3R 18209902 intron CG7985 + chr3R 18210086 intron CG7985 + chr3R 18210270 intron CG7985 + chr3R_8_18210001 chr3R_18210001 RAL-913 3893 chr3R 18235372 18235434 chr3R 18235504 18235566 9 132 31.0 30.5 30.8 0.3 194 chr3R 18235372 intergenic not near genes chr3R 18235469 intergenic not near genes chr3R 18235566 intergenic not near genes chr3R_9_18235001 chr3R_18235001 RAL-913 3894 chr3R 18302939 18302956 chr3R 18303093 18303110 5 154 24.0 8.0 16.0 0.3 171 chr3R 18302939 intergenic CG7126 -,PKD - chr3R 18303024 intergenic CG7126 -,PKD - chr3R 18303110 intergenic PKD -,CG7126 - chr3R_5_18300001 chr3R_18300001 RAL-913 3895 chr3R 18306949 18306981 chr3R 18307090 18307122 5 141 27.5 26.0 26.8 0.2 173 chr3R 18306949 exon PKD - chr3R 18307036 intron PKD - chr3R 18307122 intron PKD - chr3R_5_18305001 chr3R_18305001 RAL-913 3896 chr3R 18328551 18328591 chr3R 18328677 18328704 7 123 28.5 24.0 26.2 0.3 153 chr3R 18328551 intron CG31235 - chr3R 18328628 intron CG31235 - chr3R 18328704 intron CG31235 - chr3R_7_18325001 chr3R_18325001 RAL-913 3897 chr3R 18331801 18331817 chr3R 18333356 18333372 hopper2 9 1555 8.5 4.5 6.5 1.2 1571 chr3R 18331801 3` UTR CG15803 - chr3R 18332586 intron CG15803 - chr3R 18333372 3` UTR CG15803 - chr3R_9_18330001 chr3R_18330001 RAL-913 3898 chr3R 18352538 18352597 chr3R 18352681 18352740 14 143 17.0 19.0 18.0 0.7 202 chr3R 18352538 intron CG15803 - chr3R 18352639 intron CG15803 - chr3R 18352740 3` UTR CG15803 - chr3R_14_18350001 chr3R_18350001 RAL-913 3899 chr3R 18374608 18374676 chr3R 18374768 18374829 12 153 20.5 27.5 24.0 0.5 221 chr3R 18374608 5` UTR CR44946 + chr3R 18374718 5` UTR CR44946 + chr3R 18374829 5` UTR CR44946 + chr3R_12_18370001 chr3R_18370001 RAL-913 3900 chr3R 18379581 18379653 chr3R 18379934 18380009 14 354 24.0 12.0 18.0 0.7 428 chr3R 18379581 intron CG7675 - chr3R 18379795 intron CG7675 - chr3R 18380009 intron CG7675 - chr3R_14_18375001 chr3R_18375001 RAL-913 3901 chr3R 18394430 18394504 chr3R 18394557 18394631 32 124 10.5 9.5 10.0 2.9 201 chr3R 18394430 intron Vha100-2 - chr3R 18394530 intron Vha100-2 - chr3R 18394631 intron Vha100-2 - chr3R_32_18390001 chr3R_18390001 RAL-913 3902 chr3R 18464261 18464334 chr3R 18464449 18464523 17 187 6.0 15.0 10.5 1.5 262 chr3R 18464261 intron fru - chr3R 18464392 intron fru - chr3R 18464523 intron fru - chr3R_17_18460001 chr3R_18460001 RAL-913 3903 chr3R 18472233 18472299 chr3R 18472384 18472450 20 150 10.5 4.0 7.2 2.4 217 chr3R 18472233 intron fru - chr3R 18472342 intron fru - chr3R 18472450 intron fru - chr3R_20_18470001 chr3R_18470001 RAL-913 3904 chr3R 18473185 18473248 chr3R 18473322 18473385 10 137 8.0 3.0 5.5 1.5 200 chr3R 18473185 intron fru - chr3R 18473285 intron fru - chr3R 18473385 intron fru - chr3R_10_18470001 chr3R_18470001 RAL-913 3905 chr3R 18481146 18481208 chr3R 18481285 18481342 13 137 22.5 25.5 24.0 0.5 196 chr3R 18481146 intron fru - chr3R 18481244 intron fru - chr3R 18481342 intron fru - chr3R_13_18480001 chr3R_18480001 RAL-913 3906 chr3R 18485281 18485353 chr3R 18485431 18485503 10 150 6.0 5.0 5.5 1.5 222 chr3R 18485281 intron fru - chr3R 18485392 intron fru - chr3R 18485503 intron fru - chr3R_10_18485001 chr3R_18485001 RAL-913 3907 chr3R 18496625 18496656 chr3R 18496754 18496785 11 129 5.5 8.0 6.8 1.4 160 chr3R 18496625 intron fru - chr3R 18496705 intron fru - chr3R 18496785 intron fru - chr3R_11_18495001 chr3R_18495001 RAL-913 3908 chr3R 18498144 18498189 chr3R 18498264 18498311 12 123 7.5 13.5 10.5 1.0 167 chr3R 18498144 intron fru - chr3R 18498228 intron fru - chr3R 18498311 intron fru - chr3R_12_18495001 chr3R_18495001 RAL-913 3909 chr3R 18500716 18500731 chr3R 18500887 18500902 5 171 10.5 19.0 14.8 0.3 186 chr3R 18500716 intron fru - chr3R 18500809 intron fru - chr3R 18500902 intron fru - chr3R_5_18500001 chr3R_18500001 RAL-913 3910 chr3R 18501546 18501615 chr3R 18501677 18501746 18 129 21.0 23.0 22.0 0.8 200 chr3R 18501546 intron fru - chr3R 18501646 intron fru - chr3R 18501746 intron fru - chr3R_18_18500001 chr3R_18500001 RAL-913 3911 chr3R 18528318 18528390 chr3R 18528455 18528527 22 136 18.5 14.5 16.5 1.3 209 chr3R 18528318 intron fru - chr3R 18528422 intron fru - chr3R 18528527 intron fru - chr3R_22_18525001 chr3R_18525001 RAL-913 3912 chr3R 18559384 18559392 chr3R 18559511 18559519 4 127 21.0 8.5 14.8 0.3 135 chr3R 18559384 intergenic CG7691 + chr3R 18559452 intergenic CG7691 + chr3R 18559519 intergenic CG7691 + chr3R_4_18555001 chr3R_18555001 RAL-913 3913 chr3R 18606470 18606533 chr3R 18610739 18610805 F-element 23 4274 8.0 7.0 7.5 2.7 4335 chr3R 18606470 intron,intron qin +,CG14304 - chr3R 18608638 intron,intron qin +,CG14304 - chr3R 18610805 intron,intron qin +,CG14304 - chr3R_23_18605001 chr3R_18605001 RAL-913 3914 chr3R 18615326 18615363 chr3R 18615465 18615502 12 139 17.5 29.0 23.2 0.5 176 chr3R 18615326 intron,intron qin +,CG14304 - chr3R 18615414 intron,intron qin +,CG14304 - chr3R 18615502 intron,intron qin +,CG14304 - chr3R_12_18615001 chr3R_18615001 RAL-913 3915 chr3R 18617693 18617808 chr3R 18617823 18617937 18 130 13.5 10.5 12.0 1.4 244 chr3R 18617693 intron,intron qin +,CG14304 - chr3R 18617815 intron,intron qin +,CG14304 - chr3R 18617937 intron,intron qin +,CG14304 - chr3R_18_18615001 chr3R_18615001 RAL-913 3916 chr3R 18618217 18618284 chr3R 18618352 18618419 12 135 31.5 29.5 30.5 0.4 202 chr3R 18618217 intron,intron qin +,CG14304 - chr3R 18618318 intron,intron qin +,CG14304 - chr3R 18618419 intron,intron qin +,CG14304 - chr3R_12_18615001 chr3R_18615001 RAL-913 3917 chr3R 18649883 18649942 chr3R 18650014 18650073 8 131 35.0 28.5 31.8 0.2 190 chr3R 18649883 3` UTR qin + chr3R 18649978 3` UTR qin + chr3R 18650073 3` UTR qin + chr3R_8_18645001 chr3R_18645001 RAL-913 3918 chr3R 18695719 18695729 chr3R 18695853 18695857 4 132 22.0 0.0 11.0 0.3 138 chr3R 18695719 3` UTR CG34282 + chr3R 18695788 intergenic CG34282 + chr3R 18695857 intergenic CG34282 + chr3R_4_18695001 chr3R_18695001 RAL-913 3919 chr3R 18729981 18730038 chr3R 18730107 18730154 8 123 17.5 17.5 17.5 0.4 173 chr3R 18729981 exon Cha + chr3R 18730068 intron Cha + chr3R 18730154 exon Cha + chr3R_8_18730001 chr3R_18730001 RAL-913 3920 chr3R 18739644 18739689 chr3R 18739765 18739815 6 122 23.0 23.5 23.2 0.2 171 chr3R 18739644 intron Mekk1 - chr3R 18739730 intron Mekk1 - chr3R 18739815 intron Mekk1 - chr3R_6_18735001 chr3R_18735001 RAL-913 3921 chr3R 18743480 18743550 chr3R 18743606 18743657 7 115 21.0 22.0 21.5 0.3 177 chr3R 18743480 5` UTR Mekk1 - chr3R 18743568 5` UTR Mekk1 - chr3R 18743657 intergenic Mekk1 -,CG7718 - chr3R_7_18740001 chr3R_18740001 RAL-913 3922 chr3R 18759223 18759223 chr3R 24206241 24206246 4 5447021 36.0 4.5 20.2 0.2 5447023 chr3R 18759223 intergenic CG7720 -,CG14299 - chr3R 21482734 exon CG7922 + chr3R 24206246 intron twin - chr3R_4_21480001 chr3R_21480001 RAL-913 3923 chr3R 18766734 18766805 chr3R 18766862 18766918 21 124 27.0 24.0 25.5 0.8 184 chr3R 18766734 intron CG7720 - chr3R 18766826 intron CG7720 - chr3R 18766918 intron CG7720 - chr3R_21_18765001 chr3R_18765001 RAL-913 3924 chr3R 18781642 18781721 chr3R 18781768 18781847 29 122 8.0 4.0 6.0 4.1 205 chr3R 18781642 intron CG7720 - chr3R 18781744 intron CG7720 - chr3R 18781847 intron CG7720 - chr3R_29_18780001 chr3R_18780001 RAL-913 3925 chr3R 18785836 18785891 chr3R 18785953 18786018 16 126 27.5 16.0 21.8 0.7 182 chr3R 18785836 intron CG7720 - chr3R 18785927 intron CG7720 - chr3R 18786018 intron CG7720 - chr3R_16_18785001 chr3R_18785001 RAL-913 3926 chr3R 18785925 18785981 chr3R 18786481 18786531 8 551 12.5 41.0 26.8 0.3 606 chr3R 18785925 intron CG7720 - chr3R 18786228 intron CG7720 - chr3R 18786531 intron CG7720 - chr3R_8_18785001 chr3R_18785001 RAL-913 3927 chr3R 18787439 18787521 chr3R 18787584 18787661 4 127 6.0 13.5 9.8 0.4 222 chr3R 18787439 intron CG7720 - chr3R 18787550 intron CG7720 - chr3R 18787661 intron CG7720 - chr3R_4_18785001 chr3R_18785001 RAL-913 3928 chr3R 18788701 18788763 chr3R 18788828 18788884 8 124 20.5 21.5 21.0 0.4 183 chr3R 18788701 intron CG7720 - chr3R 18788792 intron CG7720 - chr3R 18788884 intron CG7720 - chr3R_8_18785001 chr3R_18785001 RAL-913 3929 chr3R 18791447 18791491 chr3R 18791576 18791604 4 118 19.5 11.0 15.2 0.2 157 chr3R 18791447 intron CG7720 - chr3R 18791526 intron CG7720 - chr3R 18791604 intron CG7720 - chr3R_4_18790001 chr3R_18790001 RAL-913 3930 chr3R 18792768 18792831 chr3R 18792901 18792964 10 132 25.5 19.5 22.5 0.4 196 chr3R 18792768 intron CG7720 - chr3R 18792866 intron CG7720 - chr3R 18792964 intron CG7720 - chr3R_10_18790001 chr3R_18790001 RAL-913 3931 chr3R 18807283 18807454 chr3R 18807410 18807586 9 128 0.0 1.0 0.5 6.0 303 chr3R 18807283 exon CG18208 - chr3R 18807434 intron CG18208 - chr3R 18807586 intron CG18208 - chr3R_9_18805001 chr3R_18805001 RAL-913 3932 chr3R 18808431 18808508 chr3R 18808552 18808614 20 115 6.0 6.5 6.2 2.8 183 chr3R 18808431 intron CG18208 - chr3R 18808522 intron CG18208 - chr3R 18808614 intron CG18208 - chr3R_20_18805001 chr3R_18805001 RAL-913 3933 chr3R 18812026 18812099 chr3R 18812154 18812227 17 126 19.0 20.5 19.8 0.8 201 chr3R 18812026 intron CG18208 - chr3R 18812126 intron CG18208 - chr3R 18812227 intron CG18208 - chr3R_17_18810001 chr3R_18810001 RAL-913 3934 chr3R 18817465 18817540 chr3R 18817613 18817698 11 150 22.5 25.0 23.8 0.4 233 chr3R 18817465 intron CG18208 - chr3R 18817582 intron CG18208 - chr3R 18817698 intron CG18208 - chr3R_11_18815001 chr3R_18815001 RAL-913 3935 chr3R 18826307 18826344 chr3R 18826690 18826751 6 396 19.5 20.5 20.0 0.3 444 chr3R 18826307 intron CG18208 - chr3R 18826529 intron CG18208 - chr3R 18826751 intron CG18208 - chr3R_6_18825001 chr3R_18825001 RAL-913 3936 chr3R 18830028 18830085 chr3R 18830211 18830273 19 187 16.0 13.5 14.8 1.2 245 chr3R 18830028 intron CG18208 - chr3R 18830150 intron CG18208 - chr3R 18830273 intron CG18208 - chr3R_19_18830001 chr3R_18830001 RAL-913 3937 chr3R 18877961 18878033 chr3R 18878138 18878209 15 176 10.0 11.0 10.5 1.3 248 chr3R 18877961 intergenic not near genes chr3R 18878085 intergenic not near genes chr3R 18878209 intergenic not near genes chr3R_15_18875001 chr3R_18875001 RAL-913 3938 chr3R 18887551 18887599 chr3R 18887682 18887727 14 131 25.5 21.5 23.5 0.6 176 chr3R 18887551 intergenic not near genes chr3R 18887639 intergenic not near genes chr3R 18887727 intergenic not near genes chr3R_14_18885001 chr3R_18885001 RAL-913 3939 chr3R 18888063 18888135 chr3R 18888198 18888230 6 125 31.0 35.0 33.0 0.2 167 chr3R 18888063 intergenic not near genes chr3R 18888146 intergenic not near genes chr3R 18888230 intergenic not near genes chr3R_6_18885001 chr3R_18885001 RAL-913 3940 chr3R 18891774 18891836 chr3R 18891901 18891949 20 131 15.5 22.0 18.8 1.0 175 chr3R 18891774 intergenic not near genes chr3R 18891862 intergenic not near genes chr3R 18891949 intergenic not near genes chr3R_20_18890001 chr3R_18890001 RAL-913 3941 chr3R 18933783 18933809 chr3R 18933882 18933896 4 105 16.5 9.5 13.0 0.3 113 chr3R 18933783 intron CG42613 + chr3R 18933840 intron CG42613 + chr3R 18933896 intron CG42613 + chr3R_4_18930001 chr3R_18930001 RAL-913 3942 chr3R 18936162 18936192 chr3R 18936313 18936343 8 150 8.5 30.5 19.5 0.4 181 chr3R 18936162 intron CG42613 + chr3R 18936252 intron CG42613 + chr3R 18936343 intron CG42613 + chr3R_8_18935001 chr3R_18935001 RAL-913 3943 chr3R 18981167 18981195 chr3R 18981294 18981322 10 127 9.5 5.5 7.5 1.2 155 chr3R 18981167 intron,5` UTR Smu1 -,dnk + chr3R 18981244 intron,intron Smu1 -,dnk + chr3R 18981322 5` UTR,intron Smu1 -,dnk + chr3R_10_18980001 chr3R_18980001 RAL-913 3944 chr3R 19008344 19008404 chr3R 19008477 19008537 23 133 11.5 15.0 13.2 1.6 193 chr3R 19008344 intron gukh + chr3R 19008440 intron gukh + chr3R 19008537 exon gukh + chr3R_23_19005001 chr3R_19005001 RAL-913 3945 chr3R 19014054 19014079 chr3R 19014184 19014209 4 130 25.5 18.0 21.8 0.2 155 chr3R 19014054 intron gukh + chr3R 19014132 intron gukh + chr3R 19014209 intron gukh + chr3R_4_19010001 chr3R_19010001 RAL-913 3946 chr3R 19014085 19014108 chr3R 19014172 19014238 7 124 21.0 17.5 19.2 0.3 153 chr3R 19014085 intron gukh + chr3R 19014162 intron gukh + chr3R 19014238 intron gukh + chr3R_7_19010001 chr3R_19010001 RAL-913 3947 chr3R 19014863 19014884 chr3R 19014990 19015011 4 127 17.5 10.0 13.8 0.3 148 chr3R 19014863 intron gukh + chr3R 19014937 intron gukh + chr3R 19015011 intron gukh + chr3R_4_19010001 chr3R_19010001 RAL-913 3948 chr3R 19033878 19033950 chr3R 19034006 19034078 13 125 20.5 20.0 20.2 0.6 200 chr3R 19033878 intron CG6026 + chr3R 19033978 intron CG6026 + chr3R 19034078 intron CG6026 + chr3R_13_19030001 chr3R_19030001 RAL-913 3949 chr3R 19078068 19078148 chr3R 19078210 19078276 15 138 12.5 13.5 13.0 1.1 208 chr3R 19078068 intron cdi - chr3R 19078172 intron cdi - chr3R 19078276 intron cdi - chr3R_15_19075001 chr3R_19075001 RAL-913 3950 chr3R 19109176 19109248 chr3R 19109335 19109395 18 160 22.5 17.0 19.8 0.9 219 chr3R 19109176 intron CG6040 + chr3R 19109286 intron CG6040 + chr3R 19109395 intron CG6040 + chr3R_18_19105001 chr3R_19105001 RAL-913 3951 chr3R 19113099 19113138 chr3R 19113250 19113289 10 151 10.0 12.0 11.0 0.8 190 chr3R 19113099 intron CG6040 + chr3R 19113194 intron CG6040 + chr3R 19113289 intron CG6040 + chr3R_10_19110001 chr3R_19110001 RAL-913 3952 chr3R 19122881 19122912 chr3R 19123007 19123038 4 126 12.5 0.0 6.2 0.6 157 chr3R 19122881 intron CG6040 + chr3R 19122960 intron CG6040 + chr3R 19123038 intron CG6040 + chr3R_4_19120001 chr3R_19120001 RAL-913 3953 chr3R 19136406 19136471 chr3R 19139742 19139807 Bari1 18 3337 60.5 66.5 63.5 0.3 3401 chr3R 19136406 exon Cyp12a4 + chr3R 19138106 intergenic not near genes chr3R 19139807 3` UTR Ppcs - chr3R_18_19135001 chr3R_19135001 RAL-913 3954 chr3R 19140240 19140257 chr3R 19140723 19140755 4 494 17.0 13.0 15.0 0.2 515 chr3R 19140240 3` UTR Ppcs - chr3R 19140498 3` UTR Ppcs - chr3R 19140755 3` UTR Ppcs - chr3R_4_19140001 chr3R_19140001 RAL-913 3955 chr3R 19140258 19140286 chr3R 19140710 19140779 5 485 11.0 13.5 12.2 0.4 521 chr3R 19140258 3` UTR Ppcs - chr3R 19140518 3` UTR Ppcs - chr3R 19140779 3` UTR Ppcs - chr3R_5_19140001 chr3R_19140001 RAL-913 3956 chr3R 19151291 19151328 chr3R 19151418 19151430 8 123 15.0 11.0 13.0 0.6 139 chr3R 19151291 intron CG5835 - chr3R 19151360 intron CG5835 - chr3R 19151430 intron CG5835 - chr3R_8_19150001 chr3R_19150001 RAL-913 3957 chr3R 19159916 19159957 chr3R 19160045 19160087 6 130 9.5 11.0 10.2 0.5 171 chr3R 19159916 3` UTR nos + chr3R 19160002 3` UTR nos + chr3R 19160087 3` UTR nos + chr3R_6_19160001 chr3R_19160001 RAL-913 3958 chr3R 19192915 19192954 chr3R 19197291 19197304 F-element 5 4370 5.5 6.0 5.8 0.7 4389 chr3R 19192915 intron CG31475 + chr3R 19195110 intron CG31475 + chr3R 19197304 intron CG31475 + chr3R_5_19195001 chr3R_19195001 RAL-913 3959 chr3R 19193002 19193004 chr3R 19197280 19197313 F-element 7 4313 0.0 4.0 2.0 2.3 4311 chr3R 19193002 intron CG31475 + chr3R 19195158 intron CG31475 + chr3R 19197313 intron CG31475 + chr3R_7_19195001 chr3R_19195001 RAL-913 3960 chr3R 19198288 19198356 chr3R 19198460 19198528 35 172 26.5 23.5 25.0 1.3 240 chr3R 19198288 intron CG31475 + chr3R 19198408 intron CG31475 + chr3R 19198528 intron CG31475 + chr3R_35_19195001 chr3R_19195001 RAL-913 3961 chr3R 19208648 19208661 chr3R 19208785 19208798 5 137 11.0 0.5 5.8 0.7 150 chr3R 19208648 intergenic not near genes chr3R 19208723 intergenic not near genes chr3R 19208798 intergenic not near genes chr3R_5_19205001 chr3R_19205001 RAL-913 3962 chr3R 19220921 19220998 chr3R 19221090 19221165 19 167 19.0 17.0 18.0 1.0 244 chr3R 19220921 intron vib - chr3R 19221043 intron vib - chr3R 19221165 intron vib - chr3R_19_19220001 chr3R_19220001 RAL-913 3963 chr3R 19223903 19223906 chr3R 19224033 19224036 4 130 0.0 10.5 5.2 0.6 133 chr3R 19223903 intron vib - chr3R 19223970 intron vib - chr3R 19224036 intron vib - chr3R_4_19220001 chr3R_19220001 RAL-913 3964 chr3R 19226709 19226764 chr3R 19230837 19230885 11 4127 37.0 53.5 45.2 0.2 4176 chr3R 19226709 intergenic vib -,CG11703 - chr3R 19228797 exon CG5250 - chr3R 19230885 exon unc79 - chr3R_11_19225001 chr3R_19225001 RAL-913 3965 chr3R 19253260 19253310 chr3R 19253408 19253447 8 141 8.0 7.5 7.8 0.9 187 chr3R 19253260 intergenic not near genes chr3R 19253354 intergenic not near genes chr3R 19253447 intergenic not near genes chr3R_8_19250001 chr3R_19250001 RAL-913 3966 chr3R 19258123 19258150 chr3R 19258275 19258306 8 154 21.5 23.0 22.2 0.3 183 chr3R 19258123 intron CG14280 + chr3R 19258214 intron CG14280 + chr3R 19258306 intron CG14280 + chr3R_8_19255001 chr3R_19255001 RAL-913 3967 chr3R 19265489 19265670 chr3R 19265623 19265811 24 134 16.5 18.0 17.2 1.3 322 chr3R 19265489 intergenic not near genes chr3R 19265650 intergenic not near genes chr3R 19265811 intergenic not near genes chr3R_24_19265001 chr3R_19265001 RAL-913 3968 chr3R 19288321 19288393 chr3R 19288458 19288527 8 136 27.5 32.5 30.0 0.3 206 chr3R 19288321 intergenic CR43451 + chr3R 19288424 5` UTR CR43451 + chr3R 19288527 5` UTR CR43451 + chr3R_8_19285001 chr3R_19285001 RAL-913 3969 chr3R 19290869 19290913 chr3R 19291002 19291046 5 133 2.5 8.0 5.2 0.8 177 chr3R 19290869 intergenic not near genes chr3R 19290958 intergenic not near genes chr3R 19291046 intergenic not near genes chr3R_5_19290001 chr3R_19290001 RAL-913 3970 chr3R 19294668 19294711 chr3R 19294922 19294965 7 254 6.5 12.0 9.2 0.7 297 chr3R 19294668 intergenic not near genes chr3R 19294816 intergenic not near genes chr3R 19294965 intergenic not near genes chr3R_7_19290001 chr3R_19290001 RAL-913 3971 chr3R 19302155 19302220 chr3R 19302306 19302371 7 151 2.0 10.5 6.2 1.0 216 chr3R 19302155 intergenic not near genes chr3R 19302263 intergenic Dl - chr3R 19302371 intergenic Dl - chr3R_7_19300001 chr3R_19300001 RAL-913 3972 chr3R 19337163 19337210 chr3R 19337296 19337302 8 113 13.0 19.5 16.2 0.5 139 chr3R 19337163 intergenic not near genes chr3R 19337232 intergenic not near genes chr3R 19337302 intergenic not near genes chr3R_8_19335001 chr3R_19335001 RAL-913 3973 chr3R 19340351 19340421 chr3R 19340478 19340548 43 127 12.5 13.0 12.8 3.1 197 chr3R 19340351 intergenic not near genes chr3R 19340450 intergenic not near genes chr3R 19340548 intergenic not near genes chr3R_43_19340001 chr3R_19340001 RAL-913 3974 chr3R 19344624 19344698 chr3R 19344809 19344883 35 185 10.5 7.5 9.0 3.5 259 chr3R 19344624 intergenic not near genes chr3R 19344754 intergenic not near genes chr3R 19344883 intergenic not near genes chr3R_35_19340001 chr3R_19340001 RAL-913 3975 chr3R 19367534 19367602 chr3R 19367673 19367741 8 139 24.0 25.0 24.5 0.3 207 chr3R 19367534 intergenic not near genes chr3R 19367638 intergenic not near genes chr3R 19367741 intergenic not near genes chr3R_8_19365001 chr3R_19365001 RAL-913 3976 chr3R 6966368 6966370 chr3R 19406076 19406078 4 12439708 22.5 14.0 18.2 0.2 12439710 chr3R 6966368 intron Antp - chr3R 13186223 exon CG8508 - chr3R 19406078 3` UTR CG5316 + chr3R_4_13185001 chr3R_13185001 RAL-913 3977 chr3R 19420068 19420130 chr3R 19420194 19420256 13 126 19.5 19.5 19.5 0.6 188 chr3R 19420068 intron CG31221 + chr3R 19420162 intron CG31221 + chr3R 19420256 intron CG31221 + chr3R_13_19420001 chr3R_19420001 RAL-913 3978 chr3R 19431452 19431494 chr3R 19431588 19431628 5 136 25.0 24.5 24.8 0.2 176 chr3R 19431452 intron CG31221 + chr3R 19431540 intron CG31221 + chr3R 19431628 intron CG31221 + chr3R_5_19430001 chr3R_19430001 RAL-913 3979 chr3R 19460761 19460841 chr3R 19460917 19460997 10 156 23.5 21.5 22.5 0.4 236 chr3R 19460761 intergenic Dys +,CG31221 + chr3R 19460879 intergenic Dys + chr3R 19460997 intergenic Dys + chr3R_10_19460001 chr3R_19460001 RAL-913 3980 chr3R 19474824 19474894 chr3R 19475009 19475078 13 185 15.0 7.5 11.2 1.1 254 chr3R 19474824 intron Dys + chr3R 19474951 intron Dys + chr3R 19475078 intron Dys + chr3R_13_19470001 chr3R_19470001 RAL-913 3981 chr3R 19486142 19486193 chr3R 19486362 19486414 17 219 19.0 17.5 18.2 0.9 272 chr3R 19486142 intron Dys + chr3R 19486278 intron Dys + chr3R 19486414 intron Dys + chr3R_17_19485001 chr3R_19485001 RAL-913 3982 chr3R 19494362 19494381 chr3R 19494492 19494511 8 130 21.0 21.0 21.0 0.4 149 chr3R 19494362 intron Dys + chr3R 19494436 intron Dys + chr3R 19494511 intron Dys + chr3R_8_19490001 chr3R_19490001 RAL-913 3983 chr3R 19514197 19514259 chr3R 19514366 19514428 18 169 14.5 17.5 16.0 1.1 231 chr3R 19514197 intron Dys + chr3R 19514312 intron Dys + chr3R 19514428 intron Dys + chr3R_18_19510001 chr3R_19510001 RAL-913 3984 chr3R 19532952 19532991 chr3R 19533194 19533233 8 241 26.0 17.0 21.5 0.4 281 chr3R 19532952 intron Dys + chr3R 19533092 intron Dys + chr3R 19533233 intron Dys + chr3R_8_19530001 chr3R_19530001 RAL-913 3985 chr3R 19564942 19564994 chr3R 19565071 19565123 13 129 33.5 34.5 34.0 0.4 181 chr3R 19564942 intron Dys + chr3R 19565032 intron Dys + chr3R 19565123 intron Dys + chr3R_13_19565001 chr3R_19565001 RAL-913 3986 chr3R 19583983 19584031 chr3R 19584318 19584366 11 335 21.0 23.5 22.2 0.5 383 chr3R 19583983 intron Dys + chr3R 19584174 intron Dys + chr3R 19584366 intron Dys + chr3R_11_19580001 chr3R_19580001 RAL-913 3987 chr3R 19590597 19590646 chr3R 19590739 19590788 14 139 3.0 8.0 5.5 2.2 191 chr3R 19590597 exon Dys + chr3R 19590692 intron Dys + chr3R 19590788 exon Dys + chr3R_14_19590001 chr3R_19590001 RAL-913 3988 chr3R 19591489 19591518 chr3R 19591618 19591648 4 125 22.5 15.5 19.0 0.2 159 chr3R 19591489 intron Dys + chr3R 19591568 intron Dys + chr3R 19591648 intron Dys + chr3R_4_19590001 chr3R_19590001 RAL-913 3989 chr3R 19602722 19602774 chr3R 19602850 19602902 12 128 22.0 20.0 21.0 0.5 180 chr3R 19602722 intergenic CG7333 + chr3R 19602812 intergenic CG7333 + chr3R 19602902 intergenic CG7333 +,CG7342 + chr3R_12_19600001 chr3R_19600001 RAL-913 3990 chr3R 19604635 19604695 chr3R 19604818 19604878 9 182 10.0 5.5 7.8 1.0 243 chr3R 19604635 exon CG7342 + chr3R 19604756 intron CG7342 + chr3R 19604878 exon CG7342 + chr3R_9_19600001 chr3R_19600001 RAL-913 3991 chr3R 19611993 19612057 chr3R 19615976 19616040 6 3983 33.0 47.0 40.0 0.1 4047 chr3R 19611993 exon CG17752 + chr3R 19614016 exon CG16727 + chr3R 19616040 3` UTR CG6231 - chr3R_6_19610001 chr3R_19610001 RAL-913 3992 chr3R 19655750 19655814 chr3R 19656086 19656150 16 336 37.5 35.0 36.2 0.4 400 chr3R 19655750 intron CG6184 - chr3R 19655950 intron CG6184 - chr3R 19656150 intron CG6184 - chr3R_16_19655001 chr3R_19655001 RAL-913 3993 chr3R 19681577 19681621 chr3R 19681718 19681762 12 141 30.0 32.0 31.0 0.4 185 chr3R 19681577 intron Naam + chr3R 19681670 intron Naam + chr3R 19681762 intron Naam + chr3R_12_19680001 chr3R_19680001 RAL-913 3994 chr3R 19702280 19702307 chr3R 19702412 19702439 6 132 33.5 30.5 32.0 0.2 159 chr3R 19702280 intergenic not near genes chr3R 19702360 intergenic not near genes chr3R 19702439 intergenic not near genes chr3R_6_19700001 chr3R_19700001 RAL-913 3995 chr3R 19702310 19702347 chr3R 19702402 19702462 9 120 27.5 31.0 29.2 0.3 152 chr3R 19702310 intergenic not near genes chr3R 19702386 intergenic not near genes chr3R 19702462 intergenic not near genes chr3R_9_19700001 chr3R_19700001 RAL-913 3996 chr3R 19718852 19718932 chr3R 19718982 19719062 8 128 22.5 24.0 23.2 0.3 210 chr3R 19718852 intergenic not near genes chr3R 19718957 intergenic not near genes chr3R 19719062 intergenic not near genes chr3R_8_19715001 chr3R_19715001 RAL-913 3997 chr3R 19742221 19742280 chr3R 19742339 19742368 11 131 19.0 19.5 19.2 0.5 147 chr3R 19742221 intron GluClalpha + chr3R 19742294 intron GluClalpha + chr3R 19742368 intron GluClalpha + chr3R_11_19740001 chr3R_19740001 RAL-913 3998 chr3R 19744198 19744213 chr3R 19749488 19749509 Rt1a 7 5294 15.5 11.0 13.2 0.5 5311 chr3R 19744198 intron,intron GluClalpha +,CR43488 - chr3R 19746854 intron GluClalpha + chr3R 19749509 intron GluClalpha + chr3R_7_19745001 chr3R_19745001 RAL-913 3999 chr3R 19783135 19783212 chr3R 19783273 19783350 26 138 20.0 22.5 21.2 1.2 215 chr3R 19783135 3` UTR CG11407 + chr3R 19783242 intergenic CG11407 +,CG11453 + chr3R 19783350 intergenic CG11453 +,CG11407 + chr3R_26_19780001 chr3R_19780001 RAL-913 4000 chr3R 19785745 19785823 chr3R 19785881 19785959 13 135 30.5 27.0 28.8 0.4 214 chr3R 19785745 intergenic CG11453 + chr3R 19785852 intergenic CG11453 + chr3R 19785959 intergenic CG11453 + chr3R_13_19785001 chr3R_19785001 RAL-913 4001 chr3R 19793856 19793921 chr3R 19793999 19794064 17 143 23.0 18.5 20.8 0.8 208 chr3R 19793856 intergenic bnl - chr3R 19793960 intergenic bnl - chr3R 19794064 intergenic bnl - chr3R_17_19790001 chr3R_19790001 RAL-913 4002 chr3R 19830835 19830881 chr3R 19830962 19831008 11 126 12.0 11.0 11.5 0.9 173 chr3R 19830835 intron bnl - chr3R 19830922 intron bnl - chr3R 19831008 intron bnl - chr3R_11_19830001 chr3R_19830001 RAL-913 4003 chr3R 19839489 19839555 chr3R 19839771 19839837 22 281 16.5 18.5 17.5 1.2 348 chr3R 19839489 intergenic not near genes chr3R 19839663 intergenic not near genes chr3R 19839837 intergenic not near genes chr3R_22_19835001 chr3R_19835001 RAL-913 4004 chr3R 19846920 19846969 chr3R 19847130 19847180 11 211 18.0 17.5 17.8 0.6 260 chr3R 19846920 intergenic CG4662 + chr3R 19847050 intergenic CG4662 + chr3R 19847180 intergenic CG4662 + chr3R_11_19845001 chr3R_19845001 RAL-913 4005 chr3R 19859499 19859535 chr3R 19859625 19859661 5 126 31.0 28.0 29.5 0.2 162 chr3R 19859499 intron Ire1 - chr3R 19859580 intron Ire1 - chr3R 19859661 intron Ire1 - chr3R_5_19855001 chr3R_19855001 RAL-913 4006 chr3R 19873019 19873085 chr3R 19873151 19873182 15 127 31.5 34.0 32.8 0.4 163 chr3R 19873019 intron CG4562 - chr3R 19873100 intron CG4562 - chr3R 19873182 intron CG4562 - chr3R_15_19870001 chr3R_19870001 RAL-913 4007 chr3R 19908221 19908286 chr3R 19908355 19908420 10 134 0.0 6.0 3.0 2.5 199 chr3R 19908221 intron RhoGAP92B + chr3R 19908320 intron RhoGAP92B + chr3R 19908420 intron,3` UTR RhoGAP92B +,CR45048 - chr3R_10_19905001 chr3R_19905001 RAL-913 4008 chr3R 19913967 19914029 chr3R 19914110 19914172 21 142 22.5 17.5 20.0 1.0 205 chr3R 19913967 3` UTR RhoGAP92B + chr3R 19914070 3` UTR RhoGAP92B + chr3R 19914172 3` UTR RhoGAP92B + chr3R_21_19910001 chr3R_19910001 RAL-913 4009 chr3R 19943828 19943860 chr3R 19943958 19943969 6 126 25.0 13.5 19.2 0.3 141 chr3R 19943828 intron Hs6st - chr3R 19943898 intron Hs6st - chr3R 19943969 intron Hs6st - chr3R_6_19940001 chr3R_19940001 RAL-913 4010 chr3R 19955311 19955368 chr3R 19955462 19955519 8 151 26.0 26.0 26.0 0.3 208 chr3R 19955311 intron Hs6st - chr3R 19955415 intron Hs6st - chr3R 19955519 intron Hs6st - chr3R_8_19955001 chr3R_19955001 RAL-913 4011 chr3R 19963606 19963643 chr3R 19963742 19963779 4 136 25.0 25.5 25.2 0.2 173 chr3R 19963606 intron Hs6st - chr3R 19963692 intron Hs6st - chr3R 19963779 intron Hs6st - chr3R_4_19960001 chr3R_19960001 RAL-913 4012 chr3R 19989539 19989583 chr3R 19989752 19989820 4 236 2.0 5.5 3.8 0.8 281 chr3R 19989539 intron Hs6st - chr3R 19989680 intron Hs6st - chr3R 19989820 intron Hs6st - chr3R_4_19985001 chr3R_19985001 RAL-913 4013 chr3R 20007167 20007237 chr3R 20007303 20007367 6 132 12.0 14.5 13.2 0.4 200 chr3R 20007167 intron Hs6st - chr3R 20007267 intron Hs6st - chr3R 20007367 intron Hs6st - chr3R_6_20005001 chr3R_20005001 RAL-913 4014 chr3R 20041075 20041142 chr3R 20041227 20041264 21 148 18.5 25.5 22.0 0.9 189 chr3R 20041075 intron CG17193 - chr3R 20041170 intron CG17193 - chr3R 20041264 intron CG17193 - chr3R_21_20040001 chr3R_20040001 RAL-913 4015 chr3R 20059417 20059453 chr3R 20059547 20059583 7 129 33.0 25.5 29.2 0.2 166 chr3R 20059417 intron CG4390 - chr3R 20059500 intron CG4390 - chr3R 20059583 exon CG4390 - chr3R_7_20055001 chr3R_20055001 RAL-913 4016 chr3R 20066081 20066134 chr3R 20066321 20066373 8 239 13.0 0.5 6.8 1.0 292 chr3R 20066081 intergenic not near genes chr3R 20066227 intergenic not near genes chr3R 20066373 intergenic not near genes chr3R_8_20065001 chr3R_20065001 RAL-913 4017 chr3R 20066511 20066581 chr3R 20066797 20066867 12 286 26.5 21.5 24.0 0.5 356 chr3R 20066511 intergenic not near genes chr3R 20066689 intergenic not near genes chr3R 20066867 intergenic not near genes chr3R_12_20065001 chr3R_20065001 RAL-913 4018 chr3R 20079075 20079138 chr3R 20079232 20079295 14 157 21.5 19.5 20.5 0.7 220 chr3R 20079075 intergenic not near genes chr3R 20079185 intergenic not near genes chr3R 20079295 intergenic not near genes chr3R_14_20075001 chr3R_20075001 RAL-913 4019 chr3R 20097663 20097734 chr3R 20097791 20097862 15 128 30.0 32.0 31.0 0.5 199 chr3R 20097663 intergenic not near genes chr3R 20097762 intergenic not near genes chr3R 20097862 intergenic not near genes chr3R_15_20095001 chr3R_20095001 RAL-913 4020 chr3R 20109488 20109560 chr3R 20114742 20114816 copia 25 5255 7.0 6.0 6.5 3.3 5328 chr3R 20109488 intergenic not near genes chr3R 20112152 intergenic not near genes chr3R 20114816 intergenic CG10887 + chr3R_25_20110001 chr3R_20110001 RAL-913 4021 chr3R 20124524 20124583 chr3R 20124661 20124720 16 134 23.0 26.0 24.5 0.6 196 chr3R 20124524 intergenic not near genes chr3R 20124622 intergenic not near genes chr3R 20124720 intergenic not near genes chr3R_16_20120001 chr3R_20120001 RAL-913 4022 chr3R 20132462 20132529 chr3R 20132938 20133003 15 475 22.5 23.0 22.8 0.6 541 chr3R 20132462 intergenic not near genes chr3R 20132732 intergenic not near genes chr3R 20133003 intergenic not near genes chr3R_15_20130001 chr3R_20130001 RAL-913 4023 chr3R 20146266 20146346 chr3R 20146636 20146718 16 363 19.0 15.0 17.0 0.9 452 chr3R 20146266 intergenic not near genes chr3R 20146492 intergenic not near genes chr3R 20146718 intergenic not near genes chr3R_16_20145001 chr3R_20145001 RAL-913 4024 chr3R 20156654 20156714 chr3R 20165874 20165934 roo 23 9219 8.0 13.5 10.8 1.9 9280 chr3R 20156654 intergenic not near genes chr3R 20161294 intergenic not near genes chr3R 20165934 intergenic not near genes chr3R_23_20160001 chr3R_20160001 RAL-913 4025 chr3R 20180676 20180718 chr3R 20180811 20180854 5 135 10.5 9.0 9.8 0.5 178 chr3R 20180676 intergenic not near genes chr3R 20180765 intergenic not near genes chr3R 20180854 intergenic not near genes chr3R_5_20180001 chr3R_20180001 RAL-913 4026 chr3R 20184536 20184599 chr3R 20184675 20184738 12 134 19.0 21.0 20.0 0.6 202 chr3R 20184536 intergenic not near genes chr3R 20184637 intergenic not near genes chr3R 20184738 intergenic not near genes chr3R_12_20180001 chr3R_20180001 RAL-913 4027 chr3R 20195201 20195259 chr3R 20195322 20195385 4 118 20.5 22.0 21.2 0.2 184 chr3R 20195201 intergenic not near genes chr3R 20195293 intergenic not near genes chr3R 20195385 intergenic not near genes chr3R_4_20195001 chr3R_20195001 RAL-913 4028 chr3R 20197075 20197140 chr3R 20197202 20197267 10 124 18.0 20.5 19.2 0.5 192 chr3R 20197075 intergenic not near genes chr3R 20197171 intergenic not near genes chr3R 20197267 intergenic not near genes chr3R_10_20195001 chr3R_20195001 RAL-913 4029 chr3R 20203906 20203925 chr3R 20204037 20204056 9 130 6.5 6.5 6.5 1.2 150 chr3R 20203906 intergenic not near genes chr3R 20203981 intergenic not near genes chr3R 20204056 intergenic not near genes chr3R_9_20200001 chr3R_20200001 RAL-913 4030 chr3R 20205519 20205595 chr3R 20205691 20205767 40 172 10.0 11.5 10.8 3.4 248 chr3R 20205519 intron Nlg4 + chr3R 20205643 intron Nlg4 + chr3R 20205767 intron Nlg4 + chr3R_40_20205001 chr3R_20205001 RAL-913 4031 chr3R 20205883 20205929 chr3R 20206017 20206063 10 134 7.5 4.5 6.0 1.4 180 chr3R 20205883 intron Nlg4 + chr3R 20205973 intron Nlg4 + chr3R 20206063 intron Nlg4 + chr3R_10_20205001 chr3R_20205001 RAL-913 4032 chr3R 20209757 20209823 chr3R 20209893 20209954 23 136 31.0 25.5 28.2 0.8 197 chr3R 20209757 intron,5` UTR Nlg4 +,CG17199 - chr3R 20209856 intron Nlg4 + chr3R 20209954 intron Nlg4 + chr3R_23_20205001 chr3R_20205001 RAL-913 4033 chr3R 20245238 20245295 chr3R 20248898 20248955 F-element 20 3660 11.5 0.0 5.8 2.9 3717 chr3R 20245238 3` UTR Nlg4 + chr3R 20247096 intergenic not near genes chr3R 20248955 intergenic not near genes chr3R_20_20245001 chr3R_20245001 RAL-913 4034 chr3R 20266473 20266537 chr3R 20272993 20273058 Burdock 29 6521 2.0 10.5 6.2 4.0 6585 chr3R 20266473 intron cic + chr3R 20269766 intron cic + chr3R 20273058 intron cic + chr3R_29_20265001 chr3R_20265001 RAL-913 4035 chr3R 20282227 20282299 chr3R 20282353 20282425 25 126 1.5 10.5 6.0 3.6 198 chr3R 20282227 intron cic + chr3R 20282326 intron cic + chr3R 20282425 intron cic + chr3R_25_20280001 chr3R_20280001 RAL-913 4036 chr3R 20286109 20286132 chr3R 20286266 20286289 7 154 24.0 17.0 20.5 0.3 180 chr3R 20286109 intron cic + chr3R 20286199 intron cic + chr3R 20286289 intron cic + chr3R_7_20285001 chr3R_20285001 RAL-913 4037 chr3R 20308167 20308206 chr3R 20308280 20308355 12 145 26.0 21.5 23.8 0.5 188 chr3R 20308167 intergenic not near genes chr3R 20308261 intergenic not near genes chr3R 20308355 intergenic not near genes chr3R_12_20305001 chr3R_20305001 RAL-913 4038 chr3R 20312807 20312884 chr3R 20312943 20313020 21 136 22.0 23.0 22.5 0.9 213 chr3R 20312807 intron CG42668 + chr3R 20312914 intron CG42668 + chr3R 20313020 intron CG42668 + chr3R_21_20310001 chr3R_20310001 RAL-913 4039 chr3R 20330953 20331023 chr3R 20331489 20331546 roo 29 535 11.0 9.0 10.0 2.6 593 chr3R 20330953 intergenic Sirt2 + chr3R 20331250 intergenic Sirt2 + chr3R 20331546 intergenic not near genes chr3R_29_20330001 chr3R_20330001 RAL-913 4040 chr3R 20345346 20345400 chr3R 20345485 20345539 12 139 25.0 33.5 29.2 0.4 193 chr3R 20345346 intergenic not near genes chr3R 20345442 intergenic not near genes chr3R 20345539 intergenic not near genes chr3R_12_20345001 chr3R_20345001 RAL-913 4041 chr3R 20391732 20391762 chr3R 20391872 20391908 9 141 18.0 22.0 20.0 0.4 176 chr3R 20391732 intron Gfrl - chr3R 20391820 intron Gfrl - chr3R 20391908 intron Gfrl - chr3R_9_20390001 chr3R_20390001 RAL-913 4042 chr3R 20394780 20394815 chr3R 20394906 20394941 7 126 6.5 2.5 4.5 1.3 161 chr3R 20394780 intron Gfrl - chr3R 20394860 intron Gfrl - chr3R 20394941 intron Gfrl - chr3R_7_20390001 chr3R_20390001 RAL-913 4043 chr3R 20434800 20434858 chr3R 20435035 20435093 8 235 11.0 7.5 9.2 0.8 293 chr3R 20434800 intron Gfrl - chr3R 20434946 intron Gfrl - chr3R 20435093 intron Gfrl - chr3R_8_20430001 chr3R_20430001 RAL-913 4044 chr3R 20450067 20450143 chr3R 20450197 20450278 10 132 7.0 0.0 3.5 2.2 211 chr3R 20450067 intron Gfrl - chr3R 20450172 intron Gfrl - chr3R 20450278 intron Gfrl - chr3R_10_20450001 chr3R_20450001 RAL-913 4045 chr3R 20469236 20469461 chr3R 20469379 20469594 11 139 13.5 21.5 17.5 0.6 358 chr3R 20469236 intron Gfrl - chr3R 20469415 intron Gfrl - chr3R 20469594 intron Gfrl - chr3R_11_20465001 chr3R_20465001 RAL-913 4046 chr3R 20487906 20487941 chr3R 20488052 20488103 6 156 25.5 19.5 22.5 0.3 197 chr3R 20487906 intergenic not near genes chr3R 20488004 intergenic not near genes chr3R 20488103 intergenic not near genes chr3R_6_20485001 chr3R_20485001 RAL-913 4047 chr3R 20506548 20506599 chr3R 20507401 20507452 BS 12 850 29.0 33.5 31.2 0.4 904 chr3R 20506548 intergenic Or92a + chr3R 20507000 intergenic CG4288 - chr3R 20507452 3` UTR CG4288 - chr3R_12_20505001 chr3R_20505001 RAL-913 4048 chr3R 20512949 20513034 chr3R 20515711 20515794 opus 30 2758 4.0 0.0 2.0 10.0 2845 chr3R 20512949 intergenic CG4288 - chr3R 20514372 intergenic not near genes chr3R 20515794 intergenic not near genes chr3R_30_20510001 chr3R_20510001 RAL-913 4049 chr3R 20518414 20518480 chr3R 20518553 20518619 16 139 27.5 29.0 28.2 0.5 205 chr3R 20518414 intergenic not near genes chr3R 20518516 intergenic not near genes chr3R 20518619 intergenic not near genes chr3R_16_20515001 chr3R_20515001 RAL-913 4050 chr3R 20527399 20527464 chr3R 20527535 20527581 7 133 19.0 16.0 17.5 0.4 182 chr3R 20527399 intergenic not near genes chr3R 20527490 intergenic not near genes chr3R 20527581 intergenic not near genes chr3R_7_20525001 chr3R_20525001 RAL-913 4051 chr3R 20549359 20549416 chr3R 20549509 20549566 10 149 32.0 35.5 33.8 0.3 207 chr3R 20549359 intron Stat92E - chr3R 20549462 intron Stat92E - chr3R 20549566 intron Stat92E - chr3R_10_20545001 chr3R_20545001 RAL-913 4052 chr3R 20553416 20553473 chr3R 20553555 20553612 4 139 22.5 22.0 22.2 0.2 196 chr3R 20553416 intron,intron att-ORFA -,att-ORFB - chr3R 20553514 intron,intron att-ORFA -,att-ORFB - chr3R 20553612 exon,exon att-ORFA -,att-ORFB - chr3R_4_20550001 chr3R_20550001 RAL-913 4053 chr3R 20585910 20585969 chr3R 20586045 20586107 4 136 21.5 12.5 17.0 0.2 197 chr3R 20585910 intergenic CG16953 -,Sep2 - chr3R 20586008 intergenic Sep2 -,CG16953 - chr3R 20586107 intergenic Sep2 -,CG16953 - chr3R_4_20585001 chr3R_20585001 RAL-913 4054 chr3R 20593502 20593573 chr3R 20593683 20593703 8 173 24.0 24.5 24.2 0.3 201 chr3R 20593502 5` UTR bon + chr3R 20593602 5` UTR bon + chr3R 20593703 5` UTR bon + chr3R_8_20590001 chr3R_20590001 RAL-913 4055 chr3R 20594438 20594512 chr3R 20594578 20594656 16 140 15.0 13.5 14.2 1.1 218 chr3R 20594438 intron bon + chr3R 20594547 intron bon + chr3R 20594656 intron bon + chr3R_16_20590001 chr3R_20590001 RAL-913 4056 chr3R 20596141 20596209 chr3R 20596278 20596346 28 136 9.0 11.0 10.0 2.5 205 chr3R 20596141 intron bon + chr3R 20596244 intron bon + chr3R 20596346 intron bon + chr3R_28_20595001 chr3R_20595001 RAL-913 4057 chr3R 20613140 20613148 chr3R 20613271 20613280 INE-1 6 132 14.5 11.0 12.8 0.4 140 chr3R 20613140 intron CG15923 - chr3R 20613210 intron CG15923 - chr3R 20613280 intron CG15923 - chr3R_6_20610001 chr3R_20610001 RAL-913 4058 chr3R 20617450 20617513 chr3R 20617771 20617832 7 320 1.0 16.5 8.8 0.7 382 chr3R 20617450 intergenic CG5466 + chr3R 20617641 intergenic CG5466 + chr3R 20617832 intergenic CG5466 + chr3R_7_20615001 chr3R_20615001 RAL-913 4059 chr3R 20653536 20653593 chr3R 20653704 20653761 9 168 28.5 27.0 27.8 0.3 225 chr3R 20653536 exon Nep4 - chr3R 20653648 intron Nep4 - chr3R 20653761 exon Nep4 - chr3R_9_20650001 chr3R_20650001 RAL-913 4060 chr3R 20657280 20657325 chr3R 20657472 20657517 9 192 29.0 28.5 28.8 0.3 237 chr3R 20657280 intron Nep4 - chr3R 20657398 intron Nep4 - chr3R 20657517 intron Nep4 - chr3R_9_20655001 chr3R_20655001 RAL-913 4061 chr3R 20684169 20684226 chr3R 20684303 20684360 19 134 18.0 20.0 19.0 0.9 191 chr3R 20684169 intergenic not near genes chr3R 20684264 intergenic not near genes chr3R 20684360 intergenic not near genes chr3R_19_20680001 chr3R_20680001 RAL-913 4062 chr3R 20707701 20707772 chr3R 20707966 20708037 26 265 24.0 19.5 21.8 1.1 336 chr3R 20707701 intron Oamb - chr3R 20707869 intron Oamb - chr3R 20708037 intron Oamb - chr3R_26_20705001 chr3R_20705001 RAL-913 4063 chr3R 20717067 20717111 chr3R 20717188 20717244 5 130 10.5 8.5 9.5 0.5 177 chr3R 20717067 intergenic not near genes chr3R 20717156 intergenic not near genes chr3R 20717244 intergenic not near genes chr3R_5_20715001 chr3R_20715001 RAL-913 4064 chr3R 20722810 20722884 chr3R 20722987 20723051 10 167 24.0 25.5 24.8 0.4 241 chr3R 20722810 intergenic not near genes chr3R 20722930 intergenic not near genes chr3R 20723051 intergenic not near genes chr3R_10_20720001 chr3R_20720001 RAL-913 4065 chr3R 20730897 20730955 chr3R 20731038 20731113 15 143 8.0 0.0 4.0 3.0 216 chr3R 20730897 intergenic not near genes chr3R 20731005 intergenic not near genes chr3R 20731113 intergenic not near genes chr3R_15_20730001 chr3R_20730001 RAL-913 4066 chr3R 20734184 20734216 chr3R 20734430 20734462 9 245 8.0 18.5 13.2 0.6 278 chr3R 20734184 intergenic not near genes chr3R 20734323 intergenic not near genes chr3R 20734462 intergenic not near genes chr3R_9_20730001 chr3R_20730001 RAL-913 4067 chr3R 20734997 20735040 chr3R 20735108 20735176 7 119 16.0 22.0 19.0 0.3 179 chr3R 20734997 intergenic not near genes chr3R 20735086 intergenic not near genes chr3R 20735176 intergenic cdc2c + chr3R_7_20735001 chr3R_20735001 RAL-913 4068 chr3R 20739539 20739602 chr3R 20739707 20739770 24 167 21.0 16.5 18.8 1.2 231 chr3R 20739539 intergenic CG17267 - chr3R 20739654 intergenic CG42322 + chr3R 20739770 intergenic CG42322 + chr3R_24_20735001 chr3R_20735001 RAL-913 4069 chr3R 20750336 20750346 chr3R 20750468 20750478 5 132 26.5 24.0 25.2 0.2 142 chr3R 20750336 exon CG42322 + chr3R 20750407 intron CG42322 + chr3R 20750478 intron CG42322 + chr3R_5_20750001 chr3R_20750001 RAL-913 4070 chr3R 20750348 20750375 chr3R 20750444 20750507 7 127 24.0 20.0 22.0 0.3 159 chr3R 20750348 exon CG42322 + chr3R 20750428 intron CG42322 + chr3R 20750507 intron CG42322 + chr3R_7_20750001 chr3R_20750001 RAL-913 4071 chr3R 20754265 20754331 chr3R 20754406 20754472 18 139 27.0 29.5 28.2 0.6 207 chr3R 20754265 intron CG42322 + chr3R 20754368 intron CG42322 + chr3R 20754472 intron CG42322 + chr3R_18_20750001 chr3R_20750001 RAL-913 4072 chr3R 20764378 20764404 chr3R 20764524 20764550 7 145 18.0 18.0 18.0 0.4 172 chr3R 20764378 intron Syp + chr3R 20764464 intron Syp + chr3R 20764550 intron Syp + chr3R_7_20760001 chr3R_20760001 RAL-913 4073 chr3R 20764409 20764439 chr3R 20764516 20764543 8 129 16.0 17.0 16.5 0.5 134 chr3R 20764409 intron Syp + chr3R 20764476 intron Syp + chr3R 20764543 intron Syp + chr3R_8_20760001 chr3R_20760001 RAL-913 4074 chr3R 20767490 20767504 chr3R 20767636 20767650 4 146 22.0 21.0 21.5 0.2 160 chr3R 20767490 intron Syp + chr3R 20767570 intron Syp + chr3R 20767650 intron Syp + chr3R_4_20765001 chr3R_20765001 RAL-913 4075 chr3R 20767511 20767529 chr3R 20767631 20767635 7 133 18.5 21.5 20.0 0.3 124 chr3R 20767511 intron Syp + chr3R 20767573 intron Syp + chr3R 20767635 intron Syp + chr3R_7_20765001 chr3R_20765001 RAL-913 4076 chr3R 20787390 20787457 chr3R 20787530 20787598 26 139 5.5 4.5 5.0 4.3 208 chr3R 20787390 intron Syp + chr3R 20787494 intron Syp + chr3R 20787598 intron Syp + chr3R_26_20785001 chr3R_20785001 RAL-913 4077 chr3R 20848305 20848357 chr3R 20848445 20848497 5 140 32.5 35.0 33.8 0.1 192 chr3R 20848305 intergenic not near genes chr3R 20848401 intergenic not near genes chr3R 20848497 intergenic not near genes chr3R_5_20845001 chr3R_20845001 RAL-913 4078 chr3R 20850045 20850096 chr3R 20850180 20850231 9 135 23.5 25.5 24.5 0.4 186 chr3R 20850045 intergenic RpS30 + chr3R 20850138 intergenic RpS30 + chr3R 20850231 intergenic RpS30 + chr3R_9_20850001 chr3R_20850001 RAL-913 4079 chr3R 20854466 20854504 chr3R 20859281 20859344 Doc 23 4832 13.0 12.5 12.8 1.7 4878 chr3R 20854466 intron Ir93a - chr3R 20856905 intron Ir93a - chr3R 20859344 exon Ir93a - chr3R_23_20855001 chr3R_20855001 RAL-913 4080 chr3R 20870205 20870278 chr3R 20870340 20870413 39 133 4.5 10.0 7.2 4.8 208 chr3R 20870205 intergenic not near genes chr3R 20870309 intergenic not near genes chr3R 20870413 intergenic not near genes chr3R_39_20870001 chr3R_20870001 RAL-913 4081 chr3R 20878340 20878350 chr3R 20878475 20878486 4 136 25.5 8.5 17.0 0.2 146 chr3R 20878340 3` UTR TotZ + chr3R 20878413 3` UTR CR44048 - chr3R 20878486 3` UTR CR44048 - chr3R_4_20875001 chr3R_20875001 RAL-913 4082 chr3R 20899885 20899935 chr3R 20900031 20900081 8 146 20.0 25.0 22.5 0.3 196 chr3R 20899885 intergenic not near genes chr3R 20899983 intergenic not near genes chr3R 20900081 intergenic not near genes chr3R_8_20895001 chr3R_20895001 RAL-913 4083 chr3R 20901606 20901674 chr3R 20901759 20901827 9 151 27.5 29.0 28.2 0.3 221 chr3R 20901606 intergenic CG5621 + chr3R 20901716 intergenic CG5621 + chr3R 20901827 intergenic CG5621 + chr3R_9_20900001 chr3R_20900001 RAL-913 4084 chr3R 20936036 20936107 chr3R 20936163 20936234 22 127 20.5 21.5 21.0 1.0 198 chr3R 20936036 intron CG31191 - chr3R 20936135 intron CG31191 - chr3R 20936234 intron CG31191 - chr3R_22_20935001 chr3R_20935001 RAL-913 4085 chr3R 20946866 20946889 chr3R 20946977 20946987 4 106 15.0 12.5 13.8 0.3 121 chr3R 20946866 intergenic not near genes chr3R 20946926 intergenic not near genes chr3R 20946987 intergenic not near genes chr3R_4_20945001 chr3R_20945001 RAL-913 4086 chr3R 20958358 20958412 chr3R 20958495 20958563 25 150 18.5 16.0 17.2 1.4 205 chr3R 20958358 intron Atpalpha + chr3R 20958460 intron Atpalpha + chr3R 20958563 intron Atpalpha + chr3R_25_20955001 chr3R_20955001 RAL-913 4087 chr3R 20966077 20966154 chr3R 20966210 20966287 14 133 20.5 21.5 21.0 0.6 210 chr3R 20966077 intron Atpalpha + chr3R 20966182 intron Atpalpha + chr3R 20966287 intron Atpalpha + chr3R_14_20965001 chr3R_20965001 RAL-913 4088 chr3R 21013970 21014005 chr3R 21014098 21014133 11 127 25.5 27.0 26.2 0.4 163 chr3R 21013970 3` UTR Calx + chr3R 21014052 3` UTR Calx + chr3R 21014133 3` UTR Calx + chr3R_11_21010001 chr3R_21010001 RAL-913 4089 chr3R 21014006 21014033 chr3R 21014092 21014161 10 124 21.5 27.0 24.2 0.4 155 chr3R 21014006 3` UTR Calx + chr3R 21014084 3` UTR Calx + chr3R 21014161 3` UTR Calx + chr3R_10_21010001 chr3R_21010001 RAL-913 4090 chr3R 21020352 21020424 chr3R 21020478 21020550 47 125 8.0 7.0 7.5 5.5 198 chr3R 21020352 3` UTR Rlip + chr3R 21020451 3` UTR Rlip + chr3R 21020550 3` UTR Rlip + chr3R_47_21020001 chr3R_21020001 RAL-913 4091 chr3R 21049138 21049202 chr3R 21049322 21049386 9 184 59.0 59.5 59.2 0.1 248 chr3R 21049138 intergenic CG7079 - chr3R 21049262 intergenic CG7079 - chr3R 21049386 intergenic not near genes chr3R_9_21045001 chr3R_21045001 RAL-913 4092 chr3R 21048383 21048447 chr3R 21051374 21051438 17 2991 48.0 51.5 49.8 0.3 3055 chr3R 21048383 exon CG7079 - chr3R 21049910 intergenic CG17279 - chr3R 21051438 3` UTR Mvl - chr3R_17_21045001 chr3R_21045001 RAL-913 4093 chr3R 21107988 21108063 chr3R 21108299 21108374 18 311 7.0 5.0 6.0 2.6 386 chr3R 21107988 intergenic Sec15 -,rtet + chr3R 21108181 intergenic Sec15 -,rtet + chr3R 21108374 intergenic rtet +,Sec15 - chr3R_18_21105001 chr3R_21105001 RAL-913 4094 chr3R 21129783 21130017 chr3R 21129922 21130144 8 132 15.0 16.0 15.5 0.5 361 chr3R 21129783 intergenic Obp93a -,CG5793 +,Ice2 + chr3R 21129964 intergenic Obp93a -,Ice2 +,CG5793 + chr3R 21130144 intergenic Ice2 +,Obp93a - chr3R_8_21125001 chr3R_21125001 RAL-913 4095 chr3R 21132583 21132639 chr3R 21132716 21132758 9 132 31.5 28.5 30.0 0.3 175 chr3R 21132583 3` UTR Ice2 + chr3R 21132670 3` UTR Ice2 + chr3R 21132758 exon CG7009 - chr3R_9_21130001 chr3R_21130001 RAL-913 4096 chr3R 21141631 21141704 chr3R 21150161 21150207 Tirant 19 8525 10.5 6.5 8.5 2.0 8576 chr3R 21141631 intron SNF4Agamma + chr3R 21145919 intron SNF4Agamma + chr3R 21150207 intron SNF4Agamma + chr3R_19_21145001 chr3R_21145001 RAL-913 4097 chr3R 21150793 21150813 chr3R 21150978 21150998 5 185 27.5 37.0 32.2 0.2 205 chr3R 21150793 intron SNF4Agamma + chr3R 21150896 intron SNF4Agamma + chr3R 21150998 intron SNF4Agamma + chr3R_5_21150001 chr3R_21150001 RAL-913 4098 chr3R 21150814 21150830 chr3R 21150977 21151015 6 181 29.5 37.0 33.2 0.2 201 chr3R 21150814 intron SNF4Agamma + chr3R 21150914 intron SNF4Agamma + chr3R 21151015 intron SNF4Agamma + chr3R_6_21150001 chr3R_21150001 RAL-913 4099 chr3R 21154525 21154587 chr3R 21154790 21154852 19 265 3.0 7.5 5.2 3.1 327 chr3R 21154525 intron SNF4Agamma + chr3R 21154688 intron SNF4Agamma + chr3R 21154852 intron SNF4Agamma + chr3R_19_21150001 chr3R_21150001 RAL-913 4100 chr3R 21159083 21159124 chr3R 21159236 21159277 6 153 27.0 27.5 27.2 0.2 194 chr3R 21159083 intron SNF4Agamma + chr3R 21159180 intron SNF4Agamma + chr3R 21159277 intron,3` UTR SNF4Agamma +,CG10824 - chr3R_6_21155001 chr3R_21155001 RAL-913 4101 chr3R 21188053 21188086 chr3R 21188211 21188245 14 159 2.0 3.0 2.5 4.0 192 chr3R 21188053 intron SNF4Agamma + chr3R 21188149 intron SNF4Agamma + chr3R 21188245 intron SNF4Agamma + chr3R_14_21185001 chr3R_21185001 RAL-913 4102 chr3R 21195602 21195697 chr3R 21195734 21195823 12 130 7.0 5.5 6.2 1.7 221 chr3R 21195602 intron SNF4Agamma + chr3R 21195712 intron SNF4Agamma + chr3R 21195823 intron SNF4Agamma + chr3R_12_21195001 chr3R_21195001 RAL-913 4103 chr3R 21214628 21214660 chr3R 21214913 21214945 9 284 31.0 35.0 33.0 0.3 317 chr3R 21214628 intergenic CG5862 + chr3R 21214786 intergenic CG5862 + chr3R 21214945 intergenic CG5862 + chr3R_9_21210001 chr3R_21210001 RAL-913 4104 chr3R 21236431 21236492 chr3R 21236558 21236619 13 126 31.0 28.0 29.5 0.4 188 chr3R 21236431 intron e - chr3R 21236525 intron e - chr3R 21236619 intron e - chr3R_13_21235001 chr3R_21235001 RAL-913 4105 chr3R 21240400 21240463 chr3R 21240542 21240605 19 142 25.5 23.0 24.2 0.8 205 chr3R 21240400 intergenic not near genes chr3R 21240502 intergenic not near genes chr3R 21240605 intergenic not near genes chr3R_19_21240001 chr3R_21240001 RAL-913 4106 chr3R 21245819 21245861 chr3R 21245978 21246020 16 159 28.5 35.5 32.0 0.5 201 chr3R 21245819 intergenic CG5892 + chr3R 21245920 intergenic not near genes chr3R 21246020 intergenic not near genes chr3R_16_21245001 chr3R_21245001 RAL-913 4107 chr3R 21265435 21265506 chr3R 21265719 21265790 7 284 30.0 32.0 31.0 0.2 355 chr3R 21265435 intergenic ETHR + chr3R 21265612 intergenic Rab1 -,ETHR + chr3R 21265790 intergenic Rab1 - chr3R_7_21265001 chr3R_21265001 RAL-913 4108 chr3R 21343780 21343837 chr3R 21343923 21343980 13 143 20.5 21.5 21.0 0.6 200 chr3R 21343780 intron CG16791 - chr3R 21343880 intron CG16791 - chr3R 21343980 intron CG16791 - chr3R_13_21340001 chr3R_21340001 RAL-913 4109 chr3R 21383116 21383127 chr3R 21383189 21383255 4 114 33.0 30.0 31.5 0.1 139 chr3R 21383116 intergenic not near genes chr3R 21383186 intergenic not near genes chr3R 21383255 intergenic not near genes chr3R_4_21380001 chr3R_21380001 RAL-913 4110 chr3R 21385884 21385960 chr3R 21386011 21386087 21 125 5.0 8.0 6.5 2.8 203 chr3R 21385884 intergenic not near genes chr3R 21385986 intergenic not near genes chr3R 21386087 intergenic not near genes chr3R_21_21385001 chr3R_21385001 RAL-913 4111 chr3R 21388863 21388926 chr3R 21389011 21389074 19 141 20.0 22.5 21.2 0.9 211 chr3R 21388863 intergenic bap + chr3R 21388968 5` UTR bap + chr3R 21389074 exon bap + chr3R_19_21385001 chr3R_21385001 RAL-913 4112 chr3R 21417601 21417660 chr3R 21417846 21417919 12 256 31.0 5.5 18.2 0.6 318 chr3R 21417601 intron lbl - chr3R 21417760 intron lbl - chr3R 21417919 intron lbl - chr3R_12_21415001 chr3R_21415001 RAL-913 4113 chr3R 21418823 21418909 chr3R 21418957 21419050 6 135 6.0 1.5 3.8 1.2 227 chr3R 21418823 intron lbl - chr3R 21418936 intron lbl - chr3R 21419050 intron lbl - chr3R_6_21415001 chr3R_21415001 RAL-913 4114 chr3R 21432920 21432986 chr3R 21433111 21433176 6 190 24.0 18.5 21.2 0.3 256 chr3R 21432920 intron lbl - chr3R 21433048 intron lbl - chr3R 21433176 intron lbl - chr3R_6_21430001 chr3R_21430001 RAL-913 4115 chr3R 21460995 21461016 chr3R 21461129 21461156 10 139 8.0 7.0 7.5 1.2 161 chr3R 21460995 intergenic not near genes chr3R 21461076 intergenic not near genes chr3R 21461156 intergenic not near genes chr3R_10_21460001 chr3R_21460001 RAL-913 4116 chr3R 21464359 21464421 chr3R 21464496 21464555 13 135 4.0 10.5 7.2 1.6 196 chr3R 21464359 intergenic not near genes chr3R 21464457 intergenic not near genes chr3R 21464555 intergenic not near genes chr3R_13_21460001 chr3R_21460001 RAL-913 4117 chr3R 21471972 21472031 chr3R 21472103 21472134 24 129 10.0 12.5 11.2 2.0 162 chr3R 21471972 intergenic not near genes chr3R 21472053 intergenic not near genes chr3R 21472134 intergenic not near genes chr3R_24_21470001 chr3R_21470001 RAL-913 4118 chr3R 21517985 21518271 chr3R 21518164 21518405 15 138 0.0 0.0 0.0 15.0 420 chr3R 21517985 intergenic not near genes chr3R 21518195 intergenic not near genes chr3R 21518405 intergenic not near genes chr3R_15_21515001 chr3R_21515001 RAL-913 4119 chr3R 21519938 21520128 chr3R 21520089 21520272 46 152 1.5 1.5 1.5 18.4 334 chr3R 21519938 intergenic not near genes chr3R 21520105 intergenic not near genes chr3R 21520272 intergenic not near genes chr3R_46_21520001 chr3R_21520001 RAL-913 4120 chr3R 21532731 21532862 chr3R 21532861 21532997 6 135 0.0 0.0 0.0 6.0 266 chr3R 21532731 3` UTR CR43372 - chr3R 21532864 intron CR43372 - chr3R 21532997 intergenic CR43372 - chr3R_6_21530001 chr3R_21530001 RAL-913 4121 chr3R 21545562 21545617 chr3R 21545689 21545719 5 120 12.0 13.0 12.5 0.4 157 chr3R 21545562 intergenic not near genes chr3R 21545640 intergenic not near genes chr3R 21545719 intergenic not near genes chr3R_5_21545001 chr3R_21545001 RAL-913 4122 chr3R 21567975 21568012 chr3R 21568083 21568139 12 122 24.5 24.0 24.2 0.5 164 chr3R 21567975 intron CG15498 - chr3R 21568057 intron CG15498 - chr3R 21568139 intron CG15498 - chr3R_12_21565001 chr3R_21565001 RAL-913 4123 chr3R 21586380 21586445 chr3R 21586510 21586579 16 128 29.0 33.0 31.0 0.5 199 chr3R 21586380 intron InR - chr3R 21586480 intron InR - chr3R 21586579 intron InR - chr3R_16_21585001 chr3R_21585001 RAL-913 4124 chr3R 21589780 21589833 chr3R 21589909 21589962 7 129 23.0 17.0 20.0 0.3 182 chr3R 21589780 intron InR - chr3R 21589871 intron InR - chr3R 21589962 intron InR - chr3R_7_21585001 chr3R_21585001 RAL-913 4125 chr3R 21608998 21609008 chr3R 21611656 21611681 NOF 4 2674 27.5 29.0 28.2 0.1 2683 chr3R 21608998 intron InR - chr3R 21610340 intron InR - chr3R 21611681 intron InR - chr3R_4_21610001 chr3R_21610001 RAL-913 4126 chr3R 21624061 21624121 chr3R 21624205 21624265 30 143 7.0 3.0 5.0 5.0 204 chr3R 21624061 exon E2f - chr3R 21624163 intron E2f - chr3R 21624265 intron E2f - chr3R_30_21620001 chr3R_21620001 RAL-913 4127 chr3R 21651198 21651260 chr3R 21651326 21651388 18 128 23.5 21.0 22.2 0.8 190 chr3R 21651198 intron E2f - chr3R 21651293 intron E2f - chr3R 21651388 intron E2f - chr3R_18_21650001 chr3R_21650001 RAL-913 4128 chr3R 21672684 21672728 chr3R 21672819 21672863 22 135 11.5 13.0 12.2 1.7 179 chr3R 21672684 3` UTR CG31176 - chr3R 21672774 3` UTR CG31176 - chr3R 21672863 3` UTR CG31176 - chr3R_22_21670001 chr3R_21670001 RAL-913 4129 chr3R 21722305 21722336 chr3R 21722538 21722569 8 232 29.5 19.5 24.5 0.3 264 chr3R 21722305 intron CR44096 + chr3R 21722437 intron CR44096 + chr3R 21722569 intron CR44096 + chr3R_8_21720001 chr3R_21720001 RAL-913 4130 chr3R 21725642 21725940 chr3R 21725828 21726066 14 147 23.5 20.0 21.8 0.6 424 chr3R 21725642 intergenic not near genes chr3R 21725854 intergenic not near genes chr3R 21726066 intergenic not near genes chr3R_14_21725001 chr3R_21725001 RAL-913 4131 chr3R 21725944 21725976 chr3R 21726070 21726102 6 126 23.5 31.5 27.5 0.2 158 chr3R 21725944 intergenic not near genes chr3R 21726023 intergenic not near genes chr3R 21726102 intergenic not near genes chr3R_6_21725001 chr3R_21725001 RAL-913 4132 chr3R 21731751 21731820 chr3R 21731909 21731961 7 155 11.0 0.5 5.8 1.0 210 chr3R 21731751 intergenic not near genes chr3R 21731856 intergenic not near genes chr3R 21731961 intergenic not near genes chr3R_7_21730001 chr3R_21730001 RAL-913 4133 chr3R 21733547 21733555 chr3R 21733671 21733685 4 127 41.5 63.0 52.2 0.1 138 chr3R 21733547 intergenic not near genes chr3R 21733616 intergenic not near genes chr3R 21733685 intergenic not near genes chr3R_4_21730001 chr3R_21730001 RAL-913 4134 chr3R 21733573 21733584 chr3R 21733656 21733670 7 109 45.0 59.5 52.2 0.1 97 chr3R 21733573 intergenic not near genes chr3R 21733622 intergenic not near genes chr3R 21733670 intergenic not near genes chr3R_7_21730001 chr3R_21730001 RAL-913 4135 chr3R 21733994 21733997 chr3R 21734156 21734159 4 162 32.0 27.0 29.5 0.1 165 chr3R 21733994 intergenic not near genes chr3R 21734076 intergenic not near genes chr3R 21734159 intergenic not near genes chr3R_4_21730001 chr3R_21730001 RAL-913 4136 chr3R 21761080 21761148 chr3R 21768522 21768590 mdg1 26 7437 7.5 11.0 9.2 2.5 7510 chr3R 21761080 exon CG42335 + chr3R 21764835 intron CG42335 + chr3R 21768590 exon CG42335 + chr3R_26_21760001 chr3R_21760001 RAL-913 4137 chr3R 21784804 21784891 chr3R 21784934 21785039 21 134 3.5 2.5 3.0 5.2 235 chr3R 21784804 3` UTR,3` UTR CASK -,CRG - chr3R 21784922 3` UTR,3` UTR CASK -,CRG - chr3R 21785039 3` UTR,3` UTR CASK -,CRG - chr3R_21_21780001 chr3R_21780001 RAL-913 4138 chr3R 21800450 21800518 chr3R 21800585 21800653 19 135 7.5 9.5 8.5 2.0 203 chr3R 21800450 intron CASK - chr3R 21800552 intron CASK - chr3R 21800653 intron CASK - chr3R_19_21800001 chr3R_21800001 RAL-913 4139 chr3R 21832052 21832062 chr3R 21832200 21832210 4 148 23.5 30.0 26.8 0.1 158 chr3R 21832052 intergenic Gr93a + chr3R 21832131 intergenic Gr93a + chr3R 21832210 intergenic Gr93a + chr3R_4_21830001 chr3R_21830001 RAL-913 4140 chr3R 21845843 21845914 chr3R 21846064 21846135 11 221 30.0 27.0 28.5 0.4 292 chr3R 21845843 5` UTR,exon CR44087 +,Gr93d - chr3R 21845989 intron,exon CR44087 +,Gr93d - chr3R 21846135 5` UTR,exon CR44087 +,Gr93d - chr3R_11_21845001 chr3R_21845001 RAL-913 4141 chr3R 21903492 21903633 chr3R 21903622 21903780 14 144 0.0 0.0 0.0 14.0 288 chr3R 21903492 intron CG6678 + chr3R 21903636 intron CG6678 + chr3R 21903780 intron CG6678 + chr3R_14_21900001 chr3R_21900001 RAL-913 4142 chr3R 9620954 9620955 chr3R 21907534 21907534 4 12286580 43.5 38.5 41.0 0.1 12286580 chr3R 9620954 intron CG8312 + chr3R 15764244 intergenic not near genes chr3R 21907534 intergenic CG6678 + chr3R_4_15760001 chr3R_15760001 RAL-913 4143 chr3R 21907534 21907534 chr3R 28831801 28831802 14 6924268 38.0 21.0 29.5 0.5 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_14_25365001 chr3R_25365001 RAL-913 4144 chr3R 8339246 8339247 chr3R 21907535 21907535 7 13568288 36.0 39.0 37.5 0.2 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_7_15120001 chr3R_15120001 RAL-913 4145 chr3R 9620954 9620956 chr3R 21907535 21907535 4 12286580 43.0 39.0 41.0 0.1 12286581 chr3R 9620954 intron CG8312 + chr3R 15764244 intergenic not near genes chr3R 21907535 intergenic CG6678 + chr3R_4_15760001 chr3R_15760001 RAL-913 4146 chr3R 11905749 11905789 chr3R 21907535 21907535 4 10001772 33.5 39.0 36.2 0.1 10001786 chr3R 11905749 intron Cad87A - chr3R 16906642 intron iab-8 - chr3R 21907535 intergenic CG6678 + chr3R_4_16905001 chr3R_16905001 RAL-913 4147 chr3R 21907535 21907535 chr3R 28831801 28831803 31 6924266 37.0 21.0 29.0 1.0 6924268 chr3R 21907535 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831803 intron WASp - chr3R_31_25365001 chr3R_25365001 RAL-913 4148 chr3R 21907536 21907536 chr3R 28831801 28831802 40 6924266 37.5 21.0 29.2 1.3 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_40_25365001 chr3R_25365001 RAL-913 4149 chr3R 21937180 21937232 chr3R 21937307 21937359 16 127 7.0 13.0 10.0 1.5 179 chr3R 21937180 intergenic not near genes chr3R 21937270 intergenic not near genes chr3R 21937359 intergenic not near genes chr3R_16_21935001 chr3R_21935001 RAL-913 4150 chr3R 21944373 21944399 chr3R 21944477 21944504 7 123 23.5 23.0 23.2 0.3 131 chr3R 21944373 intergenic not near genes chr3R 21944438 intergenic not near genes chr3R 21944504 intergenic not near genes chr3R_7_21940001 chr3R_21940001 RAL-913 4151 chr3R 21949111 21949130 chr3R 21949289 21949316 5 184 21.0 19.5 20.2 0.2 205 chr3R 21949111 intergenic Eip93F + chr3R 21949214 5` UTR Eip93F + chr3R 21949316 5` UTR Eip93F + chr3R_5_21945001 chr3R_21945001 RAL-913 4152 chr3R 21985180 21985262 chr3R 21985335 21985414 16 154 8.0 13.0 10.5 1.4 234 chr3R 21985180 intron Eip93F + chr3R 21985297 intron Eip93F + chr3R 21985414 intron Eip93F + chr3R_16_21985001 chr3R_21985001 RAL-913 4153 chr3R 21997009 21997025 chr3R 21997139 21997154 5 130 27.5 25.0 26.2 0.2 145 chr3R 21997009 intron Eip93F + chr3R 21997082 intron Eip93F + chr3R 21997154 intron Eip93F + chr3R_5_21995001 chr3R_21995001 RAL-913 4154 chr3R 22039029 22039063 chr3R 22039168 22039202 8 139 6.0 3.5 4.8 1.4 173 chr3R 22039029 intergenic not near genes chr3R 22039116 intergenic not near genes chr3R 22039202 intergenic not near genes chr3R_8_22035001 chr3R_22035001 RAL-913 4155 chr3R 22084569 22084614 chr3R 22084709 22084754 6 140 25.5 31.0 28.2 0.2 185 chr3R 22084569 intergenic not near genes chr3R 22084662 intergenic not near genes chr3R 22084754 intergenic not near genes chr3R_6_22080001 chr3R_22080001 RAL-913 4156 chr3R 22100667 22100728 chr3R 22100785 22100838 13 125 20.0 19.5 19.8 0.6 171 chr3R 22100667 intron CG5778 - chr3R 22100752 intron CG5778 - chr3R 22100838 intron CG5778 - chr3R_13_22100001 chr3R_22100001 RAL-913 4157 chr3R 22105827 22105903 chr3R 22106009 22106085 11 181 20.0 27.0 23.5 0.4 258 chr3R 22105827 intron CG5778 - chr3R 22105956 intron CG5778 - chr3R 22106085 intron CG5778 - chr3R_11_22105001 chr3R_22105001 RAL-913 4158 chr3R 22108322 22108354 chr3R 22108594 22108636 8 270 25.5 23.0 24.2 0.3 314 chr3R 22108322 intron CG5778 - chr3R 22108479 intron CG5778 - chr3R 22108636 intron CG5778 - chr3R_8_22105001 chr3R_22105001 RAL-913 4159 chr3R 22108356 22108376 chr3R 22108588 22108658 11 273 19.5 22.0 20.8 0.5 302 chr3R 22108356 intron CG5778 - chr3R 22108507 intron CG5778 - chr3R 22108658 intron CG5778 - chr3R_11_22105001 chr3R_22105001 RAL-913 4160 chr3R 22161904 22161964 chr3R 22163015 22163075 22 1111 23.5 14.0 18.8 1.1 1171 chr3R 22161904 intron SKIP + chr3R 22162490 intron SKIP + chr3R 22163075 intron SKIP + chr3R_22_22160001 chr3R_22160001 RAL-913 4161 chr3R 22200866 22200932 chr3R 22200999 22201065 19 132 17.5 22.5 20.0 0.9 199 chr3R 22200866 intron,intron SKIP +,CR45224 - chr3R 22200966 intron,intron SKIP +,CR45224 - chr3R 22201065 intron,intron SKIP +,CR45224 - chr3R_19_22200001 chr3R_22200001 RAL-913 4162 chr3R 22234039 22234096 chr3R 22234166 22234223 15 123 13.5 14.0 13.8 1.0 184 chr3R 22234039 intron SKIP + chr3R 22234131 intron SKIP + chr3R 22234223 intron SKIP + chr3R_15_22230001 chr3R_22230001 RAL-913 4163 chr3R 22234632 22234713 chr3R 22236001 22236082 pogo 29 1368 8.0 4.0 6.0 4.1 1450 chr3R 22234632 intron SKIP + chr3R 22235357 intron SKIP + chr3R 22236082 intron SKIP + chr3R_29_22235001 chr3R_22235001 RAL-913 4164 chr3R 22239485 22239525 chr3R 22248583 22248623 roo 17 9098 15.0 10.5 12.8 1.2 9138 chr3R 22239485 intron SKIP + chr3R 22244054 intron SKIP + chr3R 22248623 intron SKIP + chr3R_17_22240001 chr3R_22240001 RAL-913 4165 chr3R 22280894 22280958 chr3R 22281026 22281090 18 129 23.0 30.0 26.5 0.7 196 chr3R 22280894 intron SKIP + chr3R 22280992 intron SKIP + chr3R 22281090 intron SKIP + chr3R_18_22280001 chr3R_22280001 RAL-913 4166 chr3R 22286117 22286162 chr3R 22286243 22286289 15 125 8.5 10.5 9.5 1.4 172 chr3R 22286117 intron SKIP + chr3R 22286203 intron SKIP + chr3R 22286289 intron SKIP + chr3R_15_22285001 chr3R_22285001 RAL-913 4167 chr3R 22310537 22310593 chr3R 22310680 22310736 11 143 22.0 23.5 22.8 0.5 199 chr3R 22310537 3` UTR CG34377 - chr3R 22310636 3` UTR CG34377 - chr3R 22310736 3` UTR CG34377 - chr3R_11_22310001 chr3R_22310001 RAL-913 4168 chr3R 22336027 22336068 chr3R 22336156 22336197 11 129 25.5 21.0 23.2 0.5 170 chr3R 22336027 intron CG5388 - chr3R 22336112 intron CG5388 - chr3R 22336197 intron CG5388 - chr3R_11_22335001 chr3R_22335001 RAL-913 4169 chr3R 22337760 22337810 chr3R 22337913 22337962 8 151 25.0 29.0 27.0 0.3 202 chr3R 22337760 intron CG5388 - chr3R 22337861 intron CG5388 - chr3R 22337962 intron CG5388 - chr3R_8_22335001 chr3R_22335001 RAL-913 4170 chr3R 22338863 22338890 chr3R 22339083 22339110 6 219 31.0 24.5 27.8 0.2 247 chr3R 22338863 intron CG5388 - chr3R 22338986 intron CG5388 - chr3R 22339110 intron CG5388 - chr3R_6_22335001 chr3R_22335001 RAL-913 4171 chr3R 22347830 22347904 chr3R 22347955 22348032 14 128 16.5 19.0 17.8 0.7 202 chr3R 22347830 intergenic not near genes chr3R 22347931 intergenic not near genes chr3R 22348032 intergenic not near genes chr3R_14_22345001 chr3R_22345001 RAL-913 4172 chr3R 22349252 22349309 chr3R 22349411 22349468 11 159 19.0 29.5 24.2 0.4 216 chr3R 22349252 intergenic not near genes chr3R 22349360 intergenic not near genes chr3R 22349468 intergenic not near genes chr3R_11_22345001 chr3R_22345001 RAL-913 4173 chr3R 22355048 22355126 chr3R 22355308 22355344 16 257 22.5 16.5 19.5 0.8 296 chr3R 22355048 intron rdhB + chr3R 22355196 intron rdhB + chr3R 22355344 intron rdhB + chr3R_16_22355001 chr3R_22355001 RAL-913 4174 chr3R 22368909 22368959 chr3R 22369062 22369112 13 153 0.0 3.5 1.8 4.6 203 chr3R 22368909 intron PyK + chr3R 22369010 intron PyK + chr3R 22369112 intron PyK + chr3R_13_22365001 chr3R_22365001 RAL-913 4175 chr3R 22379878 22379943 chr3R 22380005 22380070 19 127 31.0 34.5 32.8 0.6 192 chr3R 22379878 3` UTR CG18596 + chr3R 22379974 intergenic CG18596 +,CG34149 + chr3R 22380070 intergenic CG34149 +,CG18596 + chr3R_19_22375001 chr3R_22375001 RAL-913 4176 chr3R 22428547 22428608 chr3R 22428673 22428734 16 125 28.5 26.0 27.2 0.6 187 chr3R 22428547 intron CG13847 - chr3R 22428640 intron CG13847 - chr3R 22428734 intron CG13847 - chr3R_16_22425001 chr3R_22425001 RAL-913 4177 chr3R 22433047 22433058 chr3R 22433197 22433208 4 150 17.5 13.0 15.2 0.2 161 chr3R 22433047 intron CG13847 - chr3R 22433128 intron CG13847 - chr3R 22433208 intron CG13847 - chr3R_4_22430001 chr3R_22430001 RAL-913 4178 chr3R 22433064 22433087 chr3R 22433193 22433237 13 146 16.0 12.5 14.2 0.9 173 chr3R 22433064 intron CG13847 - chr3R 22433150 intron CG13847 - chr3R 22433237 intron CG13847 - chr3R_13_22430001 chr3R_22430001 RAL-913 4179 chr3R 22450503 22450576 chr3R 22453193 22453250 NOF 32 2683 5.5 8.5 7.0 4.0 2747 chr3R 22450503 intron CG34376 + chr3R 22451876 intron CG34376 + chr3R 22453250 intron CG34376 + chr3R_32_22450001 chr3R_22450001 RAL-913 4180 chr3R 22495192 22495240 chr3R 22495335 22495409 19 165 19.0 20.5 19.8 0.9 217 chr3R 22495192 intergenic not near genes chr3R 22495300 intergenic not near genes chr3R 22495409 intergenic not near genes chr3R_19_22495001 chr3R_22495001 RAL-913 4181 chr3R 22518376 22518439 chr3R 22518513 22518576 13 136 18.5 24.5 21.5 0.6 200 chr3R 22518376 3` UTR Octbeta1R + chr3R 22518476 3` UTR Octbeta1R + chr3R 22518576 3` UTR Octbeta1R + chr3R_13_22515001 chr3R_22515001 RAL-913 4182 chr3R 22530606 22530678 chr3R 22531679 22531751 9 1073 30.0 26.5 28.2 0.3 1145 chr3R 22530606 intergenic CG33099 -,CG33093 - chr3R 22531178 exon CG33093 - chr3R 22531751 exon CG33093 - chr3R_9_22530001 chr3R_22530001 RAL-913 4183 chr3R 22533936 22533968 chr3R 22534061 22534097 4 125 16.0 12.0 14.0 0.3 161 chr3R 22533936 intron CG5326 - chr3R 22534016 intron CG5326 - chr3R 22534097 intron CG5326 - chr3R_4_22530001 chr3R_22530001 RAL-913 4184 chr3R 22580598 22580671 chr3R 22580731 22580794 16 129 24.0 23.0 23.5 0.7 196 chr3R 22580598 intergenic CSN6 +,CG33110 + chr3R 22580696 intergenic CSN6 +,CG33110 + chr3R 22580794 5` UTR CSN6 + chr3R_16_22580001 chr3R_22580001 RAL-913 4185 chr3R 22648291 22648320 chr3R 22648420 22648449 6 129 29.0 11.5 20.2 0.3 158 chr3R 22648291 intron wake + chr3R 22648370 intron wake + chr3R 22648449 intron wake + chr3R_6_22645001 chr3R_22645001 RAL-913 4186 chr3R 22653163 22653207 chr3R 22653290 22653334 15 126 18.5 10.5 14.5 1.0 171 chr3R 22653163 intron wake + chr3R 22653248 intron wake + chr3R 22653334 intron wake + chr3R_15_22650001 chr3R_22650001 RAL-913 4187 chr3R 22657738 22657805 chr3R 22657867 22657934 14 129 30.5 31.5 31.0 0.4 196 chr3R 22657738 intron wake + chr3R 22657836 intron wake + chr3R 22657934 intron wake + chr3R_14_22655001 chr3R_22655001 RAL-913 4188 chr3R 22668332 22668402 chr3R 22668475 22668544 13 140 28.0 33.0 30.5 0.4 212 chr3R 22668332 intron wake + chr3R 22668438 intron wake + chr3R 22668544 intron wake + chr3R_13_22665001 chr3R_22665001 RAL-913 4189 chr3R 22672065 22672123 chr3R 22672192 22672250 16 126 28.5 29.5 29.0 0.5 185 chr3R 22672065 intron wake + chr3R 22672158 intron wake + chr3R 22672250 intron wake + chr3R_16_22670001 chr3R_22670001 RAL-913 4190 chr3R 22675134 22675211 chr3R 22675290 22675350 27 155 11.0 7.0 9.0 2.7 216 chr3R 22675134 intron wake + chr3R 22675242 intron wake + chr3R 22675350 intron wake + chr3R_27_22675001 chr3R_22675001 RAL-913 4191 chr3R 22684170 22684226 chr3R 22684296 22684313 18 122 17.5 23.0 20.2 0.8 143 chr3R 22684170 intergenic not near genes chr3R 22684242 intergenic not near genes chr3R 22684313 intergenic not near genes chr3R_18_22680001 chr3R_22680001 RAL-913 4192 chr3R 22700347 22700373 chr3R 22700475 22700501 8 128 11.0 22.0 16.5 0.5 154 chr3R 22700347 intergenic Cyp6d4 +,CCAP - chr3R 22700424 intergenic Cyp6d4 +,CCAP - chr3R 22700501 intergenic CCAP -,Cyp6d4 + chr3R_8_22700001 chr3R_22700001 RAL-913 4193 chr3R 22779436 22779442 chr3R 22779564 22779569 5 128 16.0 23.5 19.8 0.2 133 chr3R 22779436 intron,3` UTR CG7029 +,CR43654 - chr3R 22779502 intron,3` UTR CG7029 +,CR43654 - chr3R 22779569 intron,3` UTR CG7029 +,CR43654 - chr3R_5_22775001 chr3R_22775001 RAL-913 4194 chr3R 22779453 22779503 chr3R 22779556 22779631 18 121 15.0 21.0 18.0 0.9 178 chr3R 22779453 intron,3` UTR CG7029 +,CR43654 - chr3R 22779542 intron,3` UTR CG7029 +,CR43654 - chr3R 22779631 intron,3` UTR CG7029 +,CR43654 - chr3R_18_22775001 chr3R_22775001 RAL-913 4195 chr3R 22794490 22794520 chr3R 22794616 22794635 6 124 26.0 26.5 26.2 0.2 145 chr3R 22794490 intergenic CG7029 + chr3R 22794562 intergenic not near genes chr3R 22794635 intergenic not near genes chr3R_6_22790001 chr3R_22790001 RAL-913 4196 chr3R 22797723 22797929 chr3R 22797859 22798075 25 140 17.5 14.5 16.0 1.5 352 chr3R 22797723 intergenic not near genes chr3R 22797899 intergenic not near genes chr3R 22798075 intergenic not near genes chr3R_25_22795001 chr3R_22795001 RAL-913 4197 chr3R 22813112 22813178 chr3R 22813241 22813307 9 125 16.5 20.5 18.5 0.5 195 chr3R 22813112 intergenic not near genes chr3R 22813210 intergenic not near genes chr3R 22813307 intergenic not near genes chr3R_9_22810001 chr3R_22810001 RAL-913 4198 chr3R 22818085 22818156 chr3R 22818216 22818273 7 120 17.5 18.0 17.8 0.4 188 chr3R 22818085 intergenic not near genes chr3R 22818179 intergenic not near genes chr3R 22818273 intergenic not near genes chr3R_7_22815001 chr3R_22815001 RAL-913 4199 chr3R 22823148 22823207 chr3R 22823294 22823351 10 143 21.5 25.0 23.2 0.4 203 chr3R 22823148 intergenic not near genes chr3R 22823250 intergenic CR44350 - chr3R 22823351 intergenic CR44350 - chr3R_10_22820001 chr3R_22820001 RAL-913 4200 chr3R 22827372 22827443 chr3R 22827498 22827560 9 118 19.0 26.0 22.5 0.4 188 chr3R 22827372 intergenic CR44350 - chr3R 22827466 intergenic CR44350 - chr3R 22827560 intergenic CR44350 - chr3R_9_22825001 chr3R_22825001 RAL-913 4201 chr3R 22840776 22840842 chr3R 22841288 22841311 18 506 8.5 14.5 11.5 1.4 535 chr3R 22840776 intergenic not near genes chr3R 22841044 intergenic not near genes chr3R 22841311 intergenic not near genes chr3R_18_22840001 chr3R_22840001 RAL-913 4202 chr3R 22853242 22853294 chr3R 22853369 22853421 17 124 16.5 17.0 16.8 1.0 179 chr3R 22853242 intergenic not near genes chr3R 22853332 intergenic not near genes chr3R 22853421 intergenic not near genes chr3R_17_22850001 chr3R_22850001 RAL-913 4203 chr3R 22853848 22853856 chr3R 22854416 22854424 4 568 23.0 30.5 26.8 0.1 576 chr3R 22853848 intergenic not near genes chr3R 22854136 intergenic not near genes chr3R 22854424 intergenic not near genes chr3R_4_22850001 chr3R_22850001 RAL-913 4204 chr3R 22862203 22862281 chr3R 22862394 22862479 5 192 24.0 12.0 18.0 0.3 276 chr3R 22862203 intergenic not near genes chr3R 22862341 intergenic not near genes chr3R 22862479 intergenic not near genes chr3R_5_22860001 chr3R_22860001 RAL-913 4205 chr3R 22863885 22863920 chr3R 22864013 22864048 6 126 25.5 23.0 24.2 0.2 163 chr3R 22863885 intergenic not near genes chr3R 22863966 intergenic not near genes chr3R 22864048 intergenic not near genes chr3R_6_22860001 chr3R_22860001 RAL-913 4206 chr3R 22868279 22868321 chr3R 22868405 22868446 12 122 9.0 22.0 15.5 0.7 167 chr3R 22868279 intergenic not near genes chr3R 22868362 intergenic not near genes chr3R 22868446 intergenic not near genes chr3R_12_22865001 chr3R_22865001 RAL-913 4207 chr3R 22867839 22867904 chr3R 22870765 22870800 5 2906 43.5 27.5 35.5 0.1 2961 chr3R 22867839 intergenic not near genes chr3R 22869320 intergenic not near genes chr3R 22870800 intergenic not near genes chr3R_5_22865001 chr3R_22865001 RAL-913 4208 chr3R 22880885 22880943 chr3R 22881073 22881130 28 187 12.5 10.0 11.2 2.3 245 chr3R 22880885 intergenic not near genes chr3R 22881008 intergenic not near genes chr3R 22881130 intergenic not near genes chr3R_28_22880001 chr3R_22880001 RAL-913 4209 chr3R 22881191 22881230 chr3R 22884946 22884984 Doc 14 3755 5.0 13.0 9.0 1.4 3793 chr3R 22881191 intergenic not near genes chr3R 22883088 intergenic not near genes chr3R 22884984 intergenic not near genes chr3R_14_22880001 chr3R_22880001 RAL-913 4210 chr3R 22900072 22900085 chr3R 22900441 22900454 4 369 9.5 28.0 18.8 0.2 382 chr3R 22900072 intron klg + chr3R 22900263 intron klg + chr3R 22900454 intron klg + chr3R_4_22900001 chr3R_22900001 RAL-913 4211 chr3R 22919150 22919187 chr3R 22919252 22919312 10 126 16.0 14.0 15.0 0.6 162 chr3R 22919150 intron klg + chr3R 22919231 intron klg + chr3R 22919312 intron klg + chr3R_10_22915001 chr3R_22915001 RAL-913 4212 chr3R 22944878 22944946 chr3R 22945002 22945074 5 128 12.5 14.0 13.2 0.4 196 chr3R 22944878 intron klg + chr3R 22944976 intron klg + chr3R 22945074 intron klg + chr3R_5_22940001 chr3R_22940001 RAL-913 4213 chr3R 22953787 22953859 chr3R 22954489 22954558 11 701 18.0 17.0 17.5 0.6 771 chr3R 22953787 intron klg + chr3R 22954172 intron klg + chr3R 22954558 intron klg + chr3R_11_22950001 chr3R_22950001 RAL-913 4214 chr3R 22978366 22978381 chr3R 22978510 22978530 4 148 12.0 14.0 13.0 0.3 164 chr3R 22978366 intergenic CG17244 + chr3R 22978448 intergenic CG17244 + chr3R 22978530 intergenic CG17244 + chr3R_4_22975001 chr3R_22975001 RAL-913 4215 chr3R 23060254 23060260 chr3R 23060394 23060400 5 140 15.5 20.5 18.0 0.3 146 chr3R 23060254 intron sav - chr3R 23060327 intron sav - chr3R 23060400 exon sav - chr3R_5_23060001 chr3R_23060001 RAL-913 4216 chr3R 23070615 23070664 chr3R 23070745 23070802 6 137 9.0 7.0 8.0 0.7 187 chr3R 23070615 3` UTR CG13830 - chr3R 23070708 3` UTR CG13830 - chr3R 23070802 3` UTR CG13830 - chr3R_6_23070001 chr3R_23070001 RAL-913 4217 chr3R 23073629 23073643 chr3R 23073747 23073782 4 134 15.0 17.5 16.2 0.2 153 chr3R 23073629 intron CG13830 - chr3R 23073706 intron CG13830 - chr3R 23073782 intron CG13830 - chr3R_4_23070001 chr3R_23070001 RAL-913 4218 chr3R 23073644 23073675 chr3R 23073743 23073814 5 126 15.0 17.0 16.0 0.3 170 chr3R 23073644 intron CG13830 - chr3R 23073729 intron CG13830 - chr3R 23073814 intron CG13830 - chr3R_5_23070001 chr3R_23070001 RAL-913 4219 chr3R 23075374 23075434 chr3R 23075507 23075567 14 132 23.0 20.5 21.8 0.6 193 chr3R 23075374 exon CG13830 - chr3R 23075470 intron CG13830 - chr3R 23075567 intron CG13830 - chr3R_14_23075001 chr3R_23075001 RAL-913 4220 chr3R 23088954 23089012 chr3R 23089081 23089139 11 127 26.5 29.0 27.8 0.4 185 chr3R 23088954 intron CG13830 - chr3R 23089046 intron CG13830 - chr3R 23089139 intron CG13830 - chr3R_11_23085001 chr3R_23085001 RAL-913 4221 chr3R 23101331 23101344 chr3R 23101473 23101486 8 142 31.5 17.0 24.2 0.3 155 chr3R 23101331 intron CG13830 - chr3R 23101408 intron CG13830 - chr3R 23101486 intron CG13830 - chr3R_8_23100001 chr3R_23100001 RAL-913 4222 chr3R 23101345 23101408 chr3R 23101472 23101550 16 138 20.0 17.0 18.5 0.8 205 chr3R 23101345 intron CG13830 - chr3R 23101448 intron CG13830 - chr3R 23101550 intron CG13830 - chr3R_16_23100001 chr3R_23100001 RAL-913 4223 chr3R 23161868 23162008 chr3R 23162015 23162141 28 141 10.0 9.5 9.8 2.6 273 chr3R 23161868 intergenic not near genes chr3R 23162004 intergenic not near genes chr3R 23162141 intergenic not near genes chr3R_28_23160001 chr3R_23160001 RAL-913 4224 chr3R 23169004 23169060 chr3R 23169141 23169197 8 137 30.5 33.0 31.8 0.2 193 chr3R 23169004 intron Irk1 + chr3R 23169100 intron Irk1 + chr3R 23169197 intron Irk1 + chr3R_8_23165001 chr3R_23165001 RAL-913 4225 chr3R 23170449 23170517 chr3R 23170579 23170650 13 132 25.5 25.5 25.5 0.5 201 chr3R 23170449 exon Irk1 + chr3R 23170550 intron Irk1 + chr3R 23170650 intron Irk1 + chr3R_13_23170001 chr3R_23170001 RAL-913 4226 chr3R 23172458 23172536 chr3R 23172618 23172696 19 160 27.5 28.0 27.8 0.7 238 chr3R 23172458 intron Irk1 + chr3R 23172577 intron Irk1 + chr3R 23172696 intron Irk1 + chr3R_19_23170001 chr3R_23170001 RAL-913 4227 chr3R 23181043 23181102 chr3R 23181177 23181236 13 134 26.0 32.0 29.0 0.4 193 chr3R 23181043 intron Irk1 + chr3R 23181140 intron Irk1 + chr3R 23181236 intron Irk1 + chr3R_13_23180001 chr3R_23180001 RAL-913 4228 chr3R 23182636 23182706 chr3R 23182769 23182839 8 133 23.5 26.5 25.0 0.3 203 chr3R 23182636 intron Irk1 + chr3R 23182738 intron Irk1 + chr3R 23182839 intron Irk1 + chr3R_8_23180001 chr3R_23180001 RAL-913 4229 chr3R 23225006 23225017 chr3R 23225132 23225143 9 126 18.5 0.0 9.2 0.9 137 chr3R 23225006 intron cnc - chr3R 23225074 intron cnc - chr3R 23225143 intron cnc - chr3R_9_23225001 chr3R_23225001 RAL-913 4230 chr3R 23242502 23242524 chr3R 23242648 23242670 4 146 11.5 7.5 9.5 0.4 168 chr3R 23242502 intron CG4467 - chr3R 23242586 intron CG4467 - chr3R 23242670 intron CG4467 - chr3R_4_23240001 chr3R_23240001 RAL-913 4231 chr3R 23245972 23246010 chr3R 23246101 23246142 13 126 28.5 25.5 27.0 0.5 170 chr3R 23245972 intron CG4467 - chr3R 23246057 intron CG4467 - chr3R 23246142 intron CG4467 - chr3R_13_23245001 chr3R_23245001 RAL-913 4232 chr3R 23260909 23260982 chr3R 23261039 23261115 13 132 22.0 21.0 21.5 0.6 206 chr3R 23260909 3` UTR orb - chr3R 23261012 3` UTR orb - chr3R 23261115 3` UTR orb - chr3R_13_23260001 chr3R_23260001 RAL-913 4233 chr3R 23291206 23291248 chr3R 23291312 23291369 4 122 15.0 19.0 17.0 0.2 163 chr3R 23291206 3` UTR pnt - chr3R 23291288 3` UTR pnt - chr3R 23291369 exon pnt - chr3R_4_23290001 chr3R_23290001 RAL-913 4234 chr3R 23295119 23295169 chr3R 23295259 23295286 12 133 11.5 12.5 12.0 0.9 167 chr3R 23295119 intron pnt - chr3R 23295202 intron pnt - chr3R 23295286 intron pnt - chr3R_12_23295001 chr3R_23295001 RAL-913 4235 chr3R 23323984 23324052 chr3R 23324120 23324188 11 136 31.5 23.0 27.2 0.4 204 chr3R 23323984 intron pnt - chr3R 23324086 intron pnt - chr3R 23324188 intron pnt - chr3R_11_23320001 chr3R_23320001 RAL-913 4236 chr3R 23356968 23357017 chr3R 23357104 23357153 13 136 6.0 14.0 10.0 1.2 185 chr3R 23356968 intron Sec13 + chr3R 23357060 intron Sec13 + chr3R 23357153 intron Sec13 + chr3R_13_23355001 chr3R_23355001 RAL-913 4237 chr3R 23377412 23377427 chr3R 23377530 23377565 5 130 26.5 18.5 22.5 0.2 153 chr3R 23377412 3` UTR CG4393 - chr3R 23377488 3` UTR CG4393 - chr3R 23377565 3` UTR CG4393 - chr3R_5_23375001 chr3R_23375001 RAL-913 4238 chr3R 23385546 23385607 chr3R 23385718 23385780 16 172 14.5 9.5 12.0 1.2 234 chr3R 23385546 intergenic not near genes chr3R 23385663 intergenic not near genes chr3R 23385780 intergenic not near genes chr3R_16_23385001 chr3R_23385001 RAL-913 4239 chr3R 23390918 23390956 chr3R 23391050 23391085 5 130 7.5 0.5 4.0 1.0 167 chr3R 23390918 intergenic CR43387 + chr3R 23391002 intergenic CR43387 + chr3R 23391085 intergenic not near genes chr3R_5_23390001 chr3R_23390001 RAL-913 4240 chr3R 23446252 23446303 chr3R 23446363 23446428 7 118 29.5 28.0 28.8 0.2 176 chr3R 23446252 intron CG4374 - chr3R 23446340 intron CG4374 - chr3R 23446428 intron CG4374 - chr3R_7_23445001 chr3R_23445001 RAL-913 4241 chr3R 23459156 23459231 chr3R 23459524 23459597 16 367 30.5 27.5 29.0 0.5 441 chr3R 23459156 intron CG4374 - chr3R 23459376 intron CG4374 - chr3R 23459597 intron CG4374 - chr3R_16_23455001 chr3R_23455001 RAL-913 4242 chr3R 23515523 23515531 chr3R 23516734 23516742 1360 7 1211 5.5 0.0 2.8 1.8 1219 chr3R 23515523 intron Irk2 - chr3R 23516132 intron Irk2 - chr3R 23516742 intron Irk2 - chr3R_7_23515001 chr3R_23515001 RAL-913 4243 chr3R 23528208 23528280 chr3R 23528347 23528419 24 135 22.5 22.0 22.2 1.0 211 chr3R 23528208 intron CG10175 - chr3R 23528314 intron CG10175 - chr3R 23528419 intron CG10175 - chr3R_24_23525001 chr3R_23525001 RAL-913 4244 chr3R 23536904 23536973 chr3R 23537136 23537159 23 229 16.0 18.0 17.0 1.3 255 chr3R 23536904 intergenic CG10168 -,CG16732 - chr3R 23537032 3` UTR CG10168 - chr3R 23537159 exon CG10168 - chr3R_23_23535001 chr3R_23535001 RAL-913 4245 chr3R 23543255 23543311 chr3R 23543382 23543438 8 127 29.0 29.0 29.0 0.3 183 chr3R 23543255 intergenic not near genes chr3R 23543346 intergenic not near genes chr3R 23543438 intergenic not near genes chr3R_8_23540001 chr3R_23540001 RAL-913 4246 chr3R 23548033 23548101 chr3R 23548388 23548441 17 346 19.0 22.5 20.8 0.8 408 chr3R 23548033 intergenic not near genes chr3R 23548237 intergenic not near genes chr3R 23548441 intergenic not near genes chr3R_17_23545001 chr3R_23545001 RAL-913 4247 chr3R 23558349 23558429 chr3R 23560180 23560261 Bari1 27 1831 4.5 8.5 6.5 3.6 1912 chr3R 23558349 intron beat-IV + chr3R 23559305 intron beat-IV + chr3R 23560261 intron beat-IV + chr3R_27_23555001 chr3R_23555001 RAL-913 4248 chr3R 23565820 23565879 chr3R 23565957 23566035 9 150 21.5 19.0 20.2 0.4 215 chr3R 23565820 intron beat-IV + chr3R 23565928 intron beat-IV + chr3R 23566035 intron beat-IV + chr3R_9_23565001 chr3R_23565001 RAL-913 4249 chr3R 23627502 23627639 chr3R 23627629 23627760 10 144 17.5 14.0 15.8 0.6 258 chr3R 23627502 intron CG31145 - chr3R 23627631 intron CG31145 - chr3R 23627760 intron CG31145 - chr3R_10_23625001 chr3R_23625001 RAL-913 4250 chr3R 23629780 23629844 chr3R 23629909 23629973 8 127 24.0 26.0 25.0 0.3 193 chr3R 23629780 intron CG31145 - chr3R 23629876 intron CG31145 - chr3R 23629973 intron CG31145 - chr3R_8_23625001 chr3R_23625001 RAL-913 4251 chr3R 23640802 23640876 chr3R 23641261 23641335 19 455 12.0 25.0 18.5 1.0 533 chr3R 23640802 intron CG31145 - chr3R 23641068 intron CG31145 - chr3R 23641335 intron CG31145 - chr3R_19_23640001 chr3R_23640001 RAL-913 4252 chr3R 23664929 23664982 chr3R 23665062 23665131 13 135 30.5 27.0 28.8 0.4 202 chr3R 23664929 intron CG31145 - chr3R 23665030 intron CG31145 - chr3R 23665131 intron CG31145 - chr3R_13_23665001 chr3R_23665001 RAL-913 4253 chr3R 23684653 23684718 chr3R 23685189 23685254 roo 20 532 4.5 10.5 7.5 2.4 601 chr3R 23684653 exon CG18754 + chr3R 23684954 intron CG18754 + chr3R 23685254 exon CG18754 + chr3R_20_23680001 chr3R_23680001 RAL-913 4254 chr3R 23722196 23722250 chr3R 23722333 23722388 7 138 30.5 29.0 29.8 0.2 192 chr3R 23722196 intergenic not near genes chr3R 23722292 intergenic not near genes chr3R 23722388 intergenic not near genes chr3R_7_23720001 chr3R_23720001 RAL-913 4255 chr3R 23725428 23725478 chr3R 23725559 23725609 15 131 25.5 23.0 24.2 0.6 181 chr3R 23725428 intron CG10365 + chr3R 23725518 intron CG10365 + chr3R 23725609 intron CG10365 + chr3R_15_23725001 chr3R_23725001 RAL-913 4256 chr3R 23783590 23783664 chr3R 23783716 23783790 17 126 27.5 26.0 26.8 0.6 200 chr3R 23783590 intron mbc + chr3R 23783690 intron mbc + chr3R 23783790 intron mbc + chr3R_17_23780001 chr3R_23780001 RAL-913 4257 chr3R 23801533 23801602 chr3R 23801671 23801741 13 138 19.5 16.0 17.8 0.7 208 chr3R 23801533 3` UTR mbc + chr3R 23801637 intergenic mbc +,CG33111 - chr3R 23801741 3` UTR CG33111 - chr3R_13_23800001 chr3R_23800001 RAL-913 4258 chr3R 23804738 23804787 chr3R 23804876 23804925 6 132 35.5 30.0 32.8 0.2 187 chr3R 23804738 intron,intron CG33111 -,CG34355 + chr3R 23804832 intron,intron CG33111 -,CG34355 + chr3R 23804925 intron,intron CG33111 -,CG34355 + chr3R_6_23800001 chr3R_23800001 RAL-913 4259 chr3R 23818252 23818300 chr3R 23818381 23818423 9 127 25.5 25.5 25.5 0.3 171 chr3R 23818252 5` UTR,intron,5` UTR CG33111 -,CG34355 +,eIF4G2 - chr3R 23818338 5` UTR,intron,5` UTR CG33111 -,CG34355 +,eIF4G2 - chr3R 23818423 5` UTR,intron,5` UTR CG33111 -,CG34355 +,eIF4G2 - chr3R_9_23815001 chr3R_23815001 RAL-913 4260 chr3R 23820612 23820661 chr3R 23820730 23820795 18 130 16.5 22.5 19.5 0.9 183 chr3R 23820612 5` UTR CG34355 + chr3R 23820704 5` UTR CG34355 + chr3R 23820795 5` UTR CG34355 + chr3R_18_23820001 chr3R_23820001 RAL-913 4261 chr3R 23831192 23831247 chr3R 23831441 23831509 16 260 17.5 12.0 14.8 1.0 317 chr3R 23831192 intron CG34355 + chr3R 23831350 intron CG34355 + chr3R 23831509 intron CG34355 + chr3R_16_23830001 chr3R_23830001 RAL-913 4262 chr3R 23833001 23833043 chr3R 23833144 23833186 5 137 13.0 12.5 12.8 0.4 185 chr3R 23833001 intron CG34355 + chr3R 23833094 intron CG34355 + chr3R 23833186 intron CG34355 + chr3R_5_23830001 chr3R_23830001 RAL-913 4263 chr3R 23833050 23833059 chr3R 23833143 23833202 4 130 13.5 12.5 13.0 0.3 152 chr3R 23833050 intron CG34355 + chr3R 23833126 intron CG34355 + chr3R 23833202 intron CG34355 + chr3R_4_23830001 chr3R_23830001 RAL-913 4264 chr3R 23835362 23835426 chr3R 23844562 23844626 roo 28 9199 16.0 1.0 8.5 2.9 9264 chr3R 23835362 intron CG34355 + chr3R 23839994 intron CG34355 + chr3R 23844626 intron CG34355 + chr3R_28_23835001 chr3R_23835001 RAL-913 4265 chr3R 23851039 23851083 chr3R 23858756 23858800 opus 18 7717 8.0 19.5 13.8 1.2 7761 chr3R 23851039 3` UTR CG34355 + chr3R 23854920 intergenic not near genes chr3R 23858800 intergenic not near genes chr3R_18_23850001 chr3R_23850001 RAL-913 4266 chr3R 23865762 23865818 chr3R 23866479 23866510 9 711 8.5 20.5 14.5 0.6 748 chr3R 23865762 intron Pli - chr3R 23866136 intron Pli - chr3R 23866510 intron Pli - chr3R_9_23865001 chr3R_23865001 RAL-913 4267 chr3R 23868167 23868228 chr3R 23868295 23868351 21 122 17.0 11.0 14.0 1.4 184 chr3R 23868167 intron Pli - chr3R 23868259 intron Pli - chr3R 23868351 intron Pli - chr3R_21_23865001 chr3R_23865001 RAL-913 4268 chr3R 23873931 23873968 chr3R 23874064 23874083 12 121 13.5 15.0 14.2 0.8 152 chr3R 23873931 intron Pli - chr3R 23874007 intron Pli - chr3R 23874083 intron Pli - chr3R_12_23870001 chr3R_23870001 RAL-913 4269 chr3R 23876883 23876898 chr3R 23876984 23877012 4 117 34.5 32.5 33.5 0.1 129 chr3R 23876883 intron Pli - chr3R 23876948 intron Pli - chr3R 23877012 intron Pli - chr3R_4_23875001 chr3R_23875001 RAL-913 4270 chr3R 23888053 23888097 chr3R 23888189 23888233 12 136 24.0 27.0 25.5 0.5 180 chr3R 23888053 intron Pli - chr3R 23888143 intron Pli - chr3R 23888233 intron Pli - chr3R_12_23885001 chr3R_23885001 RAL-913 4271 chr3R 23944861 23944931 chr3R 23944996 23945055 24 131 6.0 5.0 5.5 3.7 194 chr3R 23944861 intron CG12268 - chr3R 23944958 intron CG12268 - chr3R 23945055 exon CG12268 - chr3R_24_23940001 chr3R_23940001 RAL-913 4272 chr3R 23948995 23949075 chr3R 23949122 23949202 37 127 7.5 7.5 7.5 4.4 207 chr3R 23948995 intergenic not near genes chr3R 23949098 intergenic not near genes chr3R 23949202 intergenic not near genes chr3R_37_23945001 chr3R_23945001 RAL-913 4273 chr3R 23962421 23962480 chr3R 23962580 23962639 13 159 33.0 29.5 31.2 0.4 218 chr3R 23962421 3` UTR AP-1sigma + chr3R 23962530 3` UTR AP-1sigma + chr3R 23962639 intergenic AP-1sigma + chr3R_13_23960001 chr3R_23960001 RAL-913 4274 chr3R 23985707 23985778 chr3R 23985854 23985925 13 146 25.0 27.0 26.0 0.5 218 chr3R 23985707 intron CG13603 - chr3R 23985816 intron CG13603 - chr3R 23985925 exon CG13603 - chr3R_13_23985001 chr3R_23985001 RAL-913 4275 chr3R 24011620 24011680 chr3R 24011753 24011813 28 133 4.5 12.5 8.5 2.9 193 chr3R 24011620 intron KrT95D - chr3R 24011716 intron KrT95D - chr3R 24011813 intron KrT95D - chr3R_28_24010001 chr3R_24010001 RAL-913 4276 chr3R 24021585 24021656 chr3R 24021725 24021796 19 140 24.0 21.5 22.8 0.8 211 chr3R 24021585 intron KrT95D - chr3R 24021690 intron KrT95D - chr3R 24021796 intron KrT95D - chr3R_19_24020001 chr3R_24020001 RAL-913 4277 chr3R 24023319 24023335 chr3R 24023441 24023464 4 123 23.5 9.5 16.5 0.2 145 chr3R 24023319 intron KrT95D - chr3R 24023392 intron KrT95D - chr3R 24023464 intron KrT95D - chr3R_4_24020001 chr3R_24020001 RAL-913 4278 chr3R 24072057 24072060 chr3R 24072545 24072548 jockey 4 488 7.5 11.0 9.2 0.4 491 chr3R 24072057 intron 4EHP - chr3R 24072302 intron 4EHP - chr3R 24072548 intron 4EHP - chr3R_4_24070001 chr3R_24070001 RAL-913 4279 chr3R 24072071 24072120 chr3R 24072528 24072606 jockey 20 482 2.0 6.5 4.2 3.8 535 chr3R 24072071 intron 4EHP - chr3R 24072338 intron 4EHP - chr3R 24072606 intron 4EHP - chr3R_20_24070001 chr3R_24070001 RAL-913 4280 chr3R 24076335 24076408 chr3R 24076472 24076544 8 137 20.0 21.5 20.8 0.4 209 chr3R 24076335 intron 4EHP - chr3R 24076440 intron 4EHP - chr3R 24076544 intron 4EHP - chr3R_8_24075001 chr3R_24075001 RAL-913 4281 chr3R 24076878 24076940 chr3R 24078394 24078457 hobo 22 1515 7.0 9.5 8.2 2.4 1579 chr3R 24076878 intron 4EHP - chr3R 24077668 intron 4EHP - chr3R 24078457 intron 4EHP - chr3R_22_24075001 chr3R_24075001 RAL-913 4282 chr3R 24096681 24096747 chr3R 24096816 24096882 15 135 34.0 34.5 34.2 0.4 201 chr3R 24096681 intron 4EHP - chr3R 24096782 intron 4EHP - chr3R 24096882 intron 4EHP - chr3R_15_24095001 chr3R_24095001 RAL-913 4283 chr3R 24100409 24100480 chr3R 24100554 24100625 20 144 22.0 25.5 23.8 0.8 216 chr3R 24100409 intron 4EHP - chr3R 24100517 intron 4EHP - chr3R 24100625 intron 4EHP - chr3R_20_24100001 chr3R_24100001 RAL-913 4284 chr3R 24116638 24116654 chr3R 24116769 24116785 7 131 23.5 20.0 21.8 0.3 147 chr3R 24116638 intron Rootletin + chr3R 24116712 intron Rootletin + chr3R 24116785 intron Rootletin + chr3R_7_24115001 chr3R_24115001 RAL-913 4285 chr3R 24116655 24116688 chr3R 24116756 24116819 11 127 19.5 20.5 20.0 0.5 164 chr3R 24116655 intron Rootletin + chr3R 24116737 intron Rootletin + chr3R 24116819 intron Rootletin + chr3R_11_24115001 chr3R_24115001 RAL-913 4286 chr3R 24167046 24167088 chr3R 24167176 24167218 7 130 14.0 20.5 17.2 0.4 172 chr3R 24167046 exon Apc2 + chr3R 24167132 intron Apc2 + chr3R 24167218 intron Apc2 + chr3R_7_24165001 chr3R_24165001 RAL-913 4287 chr3R 24207171 24207247 chr3R 24212294 24212372 flea 26 5123 6.0 12.5 9.2 2.5 5201 chr3R 24207171 intron twin - chr3R 24209772 intron twin - chr3R 24212372 intron twin - chr3R_26_24205001 chr3R_24205001 RAL-913 4288 chr3R 24236425 24236487 chr3R 24236552 24236614 10 126 16.0 19.0 17.5 0.5 189 chr3R 24236425 exon mask + chr3R 24236520 intron mask + chr3R 24236614 intron mask + chr3R_10_24235001 chr3R_24235001 RAL-913 4289 chr3R 24261139 24261201 chr3R 24261267 24261329 9 127 30.0 31.5 30.8 0.3 190 chr3R 24261139 intron jar - chr3R 24261234 intron jar - chr3R 24261329 intron jar - chr3R_9_24260001 chr3R_24260001 RAL-913 4290 chr3R 24395328 24395384 chr3R 24395471 24395527 17 144 15.0 4.5 9.8 1.6 199 chr3R 24395328 3` UTR nAChRalpha1 - chr3R 24395428 3` UTR nAChRalpha1 - chr3R 24395527 3` UTR nAChRalpha1 - chr3R_17_24395001 chr3R_24395001 RAL-913 4291 chr3R 24431552 24431612 chr3R 24431681 24431741 30 129 11.0 2.0 6.5 4.0 189 chr3R 24431552 intron nAChRalpha1 - chr3R 24431646 intron nAChRalpha1 - chr3R 24431741 intron nAChRalpha1 - chr3R_30_24430001 chr3R_24430001 RAL-913 4292 chr3R 24433426 24433505 chr3R 24433555 24433634 28 127 14.0 18.5 16.2 1.6 208 chr3R 24433426 intron nAChRalpha1 - chr3R 24433530 intron nAChRalpha1 - chr3R 24433634 intron nAChRalpha1 - chr3R_28_24430001 chr3R_24430001 RAL-913 4293 chr3R 24447673 24447755 chr3R 24447810 24447892 10 137 22.0 22.5 22.2 0.4 219 chr3R 24447673 intron nAChRalpha1 - chr3R 24447782 intron nAChRalpha1 - chr3R 24447892 intron nAChRalpha1 - chr3R_10_24445001 chr3R_24445001 RAL-913 4294 chr3R 24456211 24456228 chr3R 24456337 24456345 6 123 13.0 16.5 14.8 0.4 134 chr3R 24456211 intron nAChRalpha1 - chr3R 24456278 intron nAChRalpha1 - chr3R 24456345 intron nAChRalpha1 - chr3R_6_24455001 chr3R_24455001 RAL-913 4295 chr3R 24466941 24467003 chr3R 24467087 24467150 13 144 11.5 6.5 9.0 1.3 209 chr3R 24466941 intergenic not near genes chr3R 24467046 intergenic not near genes chr3R 24467150 intergenic not near genes chr3R_13_24465001 chr3R_24465001 RAL-913 4296 chr3R 24482891 24482930 chr3R 24483029 24483068 8 134 12.5 17.5 15.0 0.5 177 chr3R 24482891 intergenic not near genes chr3R 24482980 intergenic not near genes chr3R 24483068 intergenic not near genes chr3R_8_24480001 chr3R_24480001 RAL-913 4297 chr3R 24493238 24493301 chr3R 24493517 24493580 BS 25 279 10.0 9.0 9.5 2.4 342 chr3R 24493238 intergenic not near genes chr3R 24493409 intergenic not near genes chr3R 24493580 intergenic not near genes chr3R_25_24490001 chr3R_24490001 RAL-913 4298 chr3R 24501956 24501987 chr3R 24502076 24502122 5 132 23.0 26.0 24.5 0.2 166 chr3R 24501956 intergenic not near genes chr3R 24502039 intergenic not near genes chr3R 24502122 intergenic not near genes chr3R_5_24500001 chr3R_24500001 RAL-913 4299 chr3R 24527769 24527818 chr3R 24527910 24527959 13 141 27.0 22.5 24.8 0.5 190 chr3R 24527769 intergenic CG13618 +,CG6607 + chr3R 24527864 intergenic CG6607 +,CG13618 + chr3R 24527959 intergenic CG6607 +,CG13618 + chr3R_13_24525001 chr3R_24525001 RAL-913 4300 chr3R 24544016 24544043 chr3R 24544142 24544169 8 126 12.0 11.0 11.5 0.6 153 chr3R 24544016 intergenic CG5789 - chr3R 24544092 intergenic CG5789 - chr3R 24544169 intergenic CG5789 - chr3R_8_24540001 chr3R_24540001 RAL-913 4301 chr3R 24581458 24581505 chr3R 24581589 24581636 13 131 27.0 28.0 27.5 0.5 178 chr3R 24581458 intron CG13624 - chr3R 24581547 intron CG13624 - chr3R 24581636 intron CG13624 - chr3R_13_24580001 chr3R_24580001 RAL-913 4302 chr3R 24594629 24594666 chr3R 24594919 24594955 pogo 18 290 10.0 21.0 15.5 1.1 326 chr3R 24594629 intron mld + chr3R 24594792 intron mld + chr3R 24594955 intron mld + chr3R_18_24590001 chr3R_24590001 RAL-913 4303 chr3R 24605503 24605521 chr3R 24605651 24605671 4 150 16.5 15.0 15.8 0.2 168 chr3R 24605503 intron mld + chr3R 24605587 intron mld + chr3R 24605671 intron mld + chr3R_4_24605001 chr3R_24605001 RAL-913 4304 chr3R 24605523 24605556 chr3R 24605648 24605648 14 134 11.0 14.0 12.5 1.0 125 chr3R 24605523 intron mld + chr3R 24605586 intron mld + chr3R 24605648 intron mld + chr3R_14_24605001 chr3R_24605001 RAL-913 4305 chr3R 24613563 24613597 chr3R 24613719 24613753 7 156 0.5 16.0 8.2 0.8 190 chr3R 24613563 intron mld + chr3R 24613658 intron mld + chr3R 24613753 intron mld + chr3R_7_24610001 chr3R_24610001 RAL-913 4306 chr3R 24624331 24624381 chr3R 24624470 24624520 8 139 18.5 17.0 17.8 0.4 189 chr3R 24624331 intron Syx18 - chr3R 24624426 intron Syx18 - chr3R 24624520 exon Syx18 - chr3R_8_24620001 chr3R_24620001 RAL-913 4307 chr3R 24667556 24667596 chr3R 24667683 24667723 25 126 12.0 0.5 6.2 3.5 167 chr3R 24667556 intron slo + chr3R 24667640 intron slo + chr3R 24667723 intron slo + chr3R_25_24665001 chr3R_24665001 RAL-913 4308 chr3R 24670012 24670194 chr3R 24670162 24670328 30 144 4.5 7.5 6.0 4.3 316 chr3R 24670012 intron slo + chr3R 24670170 intron slo + chr3R 24670328 intron slo + chr3R_30_24670001 chr3R_24670001 RAL-913 4309 chr3R 24671172 24671253 chr3R 24671299 24671380 18 118 18.5 18.0 18.2 0.9 208 chr3R 24671172 intron slo + chr3R 24671276 intron slo + chr3R 24671380 intron slo + chr3R_18_24670001 chr3R_24670001 RAL-913 4310 chr3R 24730052 24730124 chr3R 24732480 24732559 Doc 16 2427 8.0 4.0 6.0 2.3 2507 chr3R 24730052 intron tok + chr3R 24731306 intron tok + chr3R 24732559 intron tok + chr3R_16_24730001 chr3R_24730001 RAL-913 4311 chr3R 24741052 24741116 chr3R 24741199 24741245 14 146 26.0 31.5 28.8 0.5 193 chr3R 24741052 intron tok + chr3R 24741148 intron tok + chr3R 24741245 intron tok + chr3R_14_24740001 chr3R_24740001 RAL-913 4312 chr3R 24744642 24744692 chr3R 24744748 24744818 8 123 32.0 26.5 29.2 0.3 176 chr3R 24744642 intron tok + chr3R 24744730 intron tok + chr3R 24744818 exon tok + chr3R_8_24740001 chr3R_24740001 RAL-913 4313 chr3R 24777175 24777181 chr3R 24777309 24777315 5 134 14.5 16.5 15.5 0.3 140 chr3R 24777175 intron CG42331 + chr3R 24777245 intron CG42331 + chr3R 24777315 intron CG42331 + chr3R_5_24775001 chr3R_24775001 RAL-913 4314 chr3R 24785036 24785109 chr3R 24785162 24785184 5 113 23.5 24.0 23.8 0.2 148 chr3R 24785036 3` UTR CG5805 - chr3R 24785110 3` UTR CG5805 - chr3R 24785184 3` UTR CG5805 - chr3R_5_24785001 chr3R_24785001 RAL-913 4315 chr3R 24787499 24787559 chr3R 24787625 24787685 19 126 5.5 6.0 5.8 2.8 186 chr3R 24787499 intergenic CG5805 - chr3R 24787592 intergenic CG5805 -,Ets96B + chr3R 24787685 intergenic CG5805 -,Ets96B + chr3R_19_24785001 chr3R_24785001 RAL-913 4316 chr3R 24854842 24854917 chr3R 24854970 24855045 9 128 24.5 24.0 24.2 0.4 203 chr3R 24854842 3` UTR,3` UTR nct +,HdacX - chr3R 24854944 3` UTR HdacX - chr3R 24855045 3` UTR HdacX - chr3R_9_24850001 chr3R_24850001 RAL-913 4317 chr3R 24893431 24893482 chr3R 24893561 24893611 16 129 10.5 13.0 11.8 1.2 180 chr3R 24893431 intron CG31121 - chr3R 24893521 intron CG31121 - chr3R 24893611 intron CG31121 - chr3R_16_24890001 chr3R_24890001 RAL-913 4318 chr3R 24927075 24927152 chr3R 24931919 24931973 Doc 29 4839 11.0 9.5 10.2 2.6 4898 chr3R 24927075 3` UTR Trf4-2 + chr3R 24929524 intergenic not near genes chr3R 24931973 intergenic CG11771 + chr3R_29_24925001 chr3R_24925001 RAL-913 4319 chr3R 24938338 24938350 chr3R 24938494 24938506 7 156 26.5 29.0 27.8 0.2 168 chr3R 24938338 intergenic Osbp -,ssh - chr3R 24938422 intergenic Osbp -,ssh - chr3R 24938506 intergenic ssh -,Osbp - chr3R_7_24935001 chr3R_24935001 RAL-913 4320 chr3R 24952748 24952798 chr3R 24952855 24952888 5 102 12.0 15.0 13.5 0.3 140 chr3R 24952748 intergenic not near genes chr3R 24952818 intergenic not near genes chr3R 24952888 intergenic not near genes chr3R_5_24950001 chr3R_24950001 RAL-913 4321 chr3R 24967075 24967144 chr3R 24967204 24967262 12 127 27.0 29.0 28.0 0.4 187 chr3R 24967075 intergenic not near genes chr3R 24967168 intergenic not near genes chr3R 24967262 intergenic not near genes chr3R_12_24965001 chr3R_24965001 RAL-913 4322 chr3R 24974862 24974923 chr3R 24974991 24975052 14 128 21.5 19.5 20.5 0.7 190 chr3R 24974862 intergenic not near genes chr3R 24974957 intergenic not near genes chr3R 24975052 intergenic not near genes chr3R_14_24970001 chr3R_24970001 RAL-913 4323 chr3R 25004850 25004922 chr3R 25004983 25005055 19 131 9.5 8.5 9.0 1.9 205 chr3R 25004850 intron tnc + chr3R 25004952 intron tnc + chr3R 25005055 intron tnc + chr3R_19_25000001 chr3R_25000001 RAL-913 4324 chr3R 25018219 25018290 chr3R 25018341 25018360 21 120 23.0 23.5 23.2 0.9 141 chr3R 25018219 exon tnc + chr3R 25018290 exon tnc + chr3R 25018360 exon tnc + chr3R_21_25015001 chr3R_25015001 RAL-913 4325 chr3R 25027493 25027564 chr3R 25027756 25027827 23 261 24.0 20.0 22.0 1.0 334 chr3R 25027493 intron Hr96 + chr3R 25027660 intron Hr96 + chr3R 25027827 intron Hr96 + chr3R_23_25025001 chr3R_25025001 RAL-913 4326 chr3R 25041505 25041529 chr3R 25041633 25041657 6 128 8.5 26.0 17.2 0.3 152 chr3R 25041505 intron 5PtaseI - chr3R 25041581 intron 5PtaseI - chr3R 25041657 intron 5PtaseI - chr3R_6_25040001 chr3R_25040001 RAL-913 4327 chr3R 25042811 25042864 chr3R 25042951 25043004 17 140 34.0 34.0 34.0 0.5 193 chr3R 25042811 intron 5PtaseI - chr3R 25042908 intron 5PtaseI - chr3R 25043004 intron 5PtaseI - chr3R_17_25040001 chr3R_25040001 RAL-913 4328 chr3R 25081849 25081922 chr3R 25081989 25082063 24 138 19.5 25.5 22.5 1.0 214 chr3R 25081849 intergenic not near genes chr3R 25081956 intergenic not near genes chr3R 25082063 intergenic not near genes chr3R_24_25080001 chr3R_25080001 RAL-913 4329 chr3R 25086014 25086042 chr3R 25086140 25086168 16 126 22.5 18.5 20.5 0.7 154 chr3R 25086014 intergenic not near genes chr3R 25086091 intergenic not near genes chr3R 25086168 intergenic not near genes chr3R_16_25085001 chr3R_25085001 RAL-913 4330 chr3R 25097071 25097090 chr3R 25097206 25097267 7 171 1.0 1.5 1.2 3.2 196 chr3R 25097071 intergenic not near genes chr3R 25097169 intergenic not near genes chr3R 25097267 intergenic CG33095 +,CG33096 + chr3R_7_25095001 chr3R_25095001 RAL-913 4331 chr3R 25102124 25102183 chr3R 25102275 25102334 13 151 31.5 30.0 30.8 0.4 210 chr3R 25102124 3` UTR,3` UTR CG33095 +,CG33096 + chr3R 25102229 intergenic CG33095 +,CG33096 +,CG45095 + chr3R 25102334 intergenic CG33095 +,CG33096 +,CG45095 + chr3R_13_25100001 chr3R_25100001 RAL-913 4332 chr3R 25126027 25126034 chr3R 25126671 25126678 5 644 38.5 33.5 36.0 0.1 651 chr3R 25126027 3` UTR,exon CG42503 -,Mocs2 - chr3R 25126352 3` UTR,exon CG42503 -,Mocs2 - chr3R 25126678 3` UTR,exon CG42503 -,Mocs2 - chr3R_5_25125001 chr3R_25125001 RAL-913 4333 chr3R 25136354 25136420 chr3R 25136484 25136550 26 130 19.5 25.5 22.5 1.1 196 chr3R 25136354 3` UTR Bili + chr3R 25136452 3` UTR Bili + chr3R 25136550 3` UTR Bili + chr3R_26_25135001 chr3R_25135001 RAL-913 4334 chr3R 25151031 25151074 chr3R 25151160 25151202 6 124 26.5 23.0 24.8 0.2 171 chr3R 25151031 intergenic not near genes chr3R 25151116 intergenic not near genes chr3R 25151202 intergenic not near genes chr3R_6_25150001 chr3R_25150001 RAL-913 4335 chr3R 25164440 25164444 chr3R 25164571 25164575 5 131 29.5 22.0 25.8 0.2 135 chr3R 25164440 intergenic not near genes chr3R 25164508 intergenic not near genes chr3R 25164575 intergenic not near genes chr3R_5_25160001 chr3R_25160001 RAL-913 4336 chr3R 25166315 25166393 chr3R 25166441 25166519 22 126 7.0 7.5 7.2 2.7 204 chr3R 25166315 intergenic not near genes chr3R 25166417 intergenic not near genes chr3R 25166519 intergenic not near genes chr3R_22_25165001 chr3R_25165001 RAL-913 4337 chr3R 25192762 25192811 chr3R 25192944 25192993 7 182 9.0 22.0 15.5 0.4 231 chr3R 25192762 intron,3` UTR lobo -,dan + chr3R 25192878 intron lobo - chr3R 25192993 intron lobo - chr3R_7_25190001 chr3R_25190001 RAL-913 4338 chr3R 25235657 25235710 chr3R 25235797 25235850 13 140 33.0 30.5 31.8 0.4 193 chr3R 25235657 intergenic CG10420 - chr3R 25235754 intergenic CG10420 - chr3R 25235850 intergenic CG10420 - chr3R_13_25235001 chr3R_25235001 RAL-913 4339 chr3R 25267734 25267760 chr3R 25267860 25267886 8 126 1.5 2.5 2.0 2.7 152 chr3R 25267734 3` UTR,intron RIOK2 +,CR45214 - chr3R 25267810 intron CR45214 - chr3R 25267886 intron CR45214 - chr3R_8_25265001 chr3R_25265001 RAL-913 4340 chr3R 25300620 25300697 chr3R 25300786 25300863 11 166 29.5 27.5 28.5 0.4 243 chr3R 25300620 intergenic CG13659 + chr3R 25300742 intergenic CG13659 + chr3R 25300863 intergenic CG13659 + chr3R_11_25300001 chr3R_25300001 RAL-913 4341 chr3R 25302631 25302690 chr3R 25302930 25302989 16 298 22.0 23.5 22.8 0.7 358 chr3R 25302631 exon CG31370 + chr3R 25302810 exon CG31370 + chr3R 25302989 exon CG31370 + chr3R_16_25300001 chr3R_25300001 RAL-913 4342 chr3R 25303791 25303862 chr3R 25305609 25305680 16 1818 52.5 61.5 57.0 0.3 1889 chr3R 25303791 exon CG31370 + chr3R 25304736 exon CG31436 + chr3R 25305680 intergenic CG31436 + chr3R_16_25300001 chr3R_25300001 RAL-913 4343 chr3R 25334400 25334451 chr3R 25334559 25334625 5 171 23.0 24.0 23.5 0.2 225 chr3R 25334400 intron CG10669 - chr3R 25334512 exon CG10669 - chr3R 25334625 exon CG10669 - chr3R_5_25330001 chr3R_25330001 RAL-913 4344 chr3R 25368365 25368505 chr3R 25368592 25368677 30 184 5.0 0.0 2.5 8.6 312 chr3R 25368365 intron Fur1 - chr3R 25368521 intron Fur1 - chr3R 25368677 intron Fur1 - chr3R_30_25365001 chr3R_25365001 RAL-913 4345 chr3R 25422017 25422096 chr3R 25422148 25422245 11 133 24.0 26.5 25.2 0.4 228 chr3R 25422017 intron Fur1 - chr3R 25422131 intron Fur1 - chr3R 25422245 intron Fur1 - chr3R_11_25420001 chr3R_25420001 RAL-913 4346 chr3R 25436442 25436518 chr3R 25436586 25436662 19 143 32.5 33.0 32.8 0.6 220 chr3R 25436442 intron Fur1 - chr3R 25436552 intron Fur1 - chr3R 25436662 intron Fur1 - chr3R_19_25435001 chr3R_25435001 RAL-913 4347 chr3R 25450712 25450766 chr3R 25451462 25451516 9 750 27.0 27.0 27.0 0.3 804 chr3R 25450712 intron Fur1 - chr3R 25451114 intron Fur1 - chr3R 25451516 intron Fur1 - chr3R_9_25450001 chr3R_25450001 RAL-913 4348 chr3R 25520960 25520978 chr3R 25521091 25521127 14 148 24.0 9.5 16.8 0.8 167 chr3R 25520960 intron msi + chr3R 25521044 intron msi + chr3R 25521127 intron msi + chr3R_14_25520001 chr3R_25520001 RAL-913 4349 chr3R 25527990 25528043 chr3R 25528143 25528191 24 152 15.5 11.5 13.5 1.7 201 chr3R 25527990 intron msi + chr3R 25528090 intron msi + chr3R 25528191 intron msi + chr3R_24_25525001 chr3R_25525001 RAL-913 4350 chr3R 25571844 25571872 chr3R 25571982 25572010 10 138 27.5 30.0 28.8 0.3 166 chr3R 25571844 intron msi + chr3R 25571927 intron msi + chr3R 25572010 intron msi + chr3R_10_25570001 chr3R_25570001 RAL-913 4351 chr3R 25583227 25583273 chr3R 25583347 25583401 6 125 26.0 30.0 28.0 0.2 174 chr3R 25583227 intron msi + chr3R 25583314 intron msi + chr3R 25583401 intron msi + chr3R_6_25580001 chr3R_25580001 RAL-913 4352 chr3R 25612286 25612346 chr3R 25612415 25612475 12 127 19.5 20.5 20.0 0.6 189 chr3R 25612286 intron Npl4 - chr3R 25612380 intron Npl4 - chr3R 25612475 intron Npl4 - chr3R_12_25610001 chr3R_25610001 RAL-913 4353 chr3R 25621002 25621068 chr3R 25621127 25621184 12 125 27.5 22.5 25.0 0.5 182 chr3R 25621002 intron Npl4 - chr3R 25621093 intron Npl4 - chr3R 25621184 intron Npl4 - chr3R_12_25620001 chr3R_25620001 RAL-913 4354 chr3R 25629148 25629200 chr3R 25629279 25629346 13 140 33.0 28.5 30.8 0.4 198 chr3R 25629148 intergenic not near genes chr3R 25629247 intergenic not near genes chr3R 25629346 intergenic not near genes chr3R_13_25625001 chr3R_25625001 RAL-913 4355 chr3R 25638818 25638853 chr3R 25638939 25638973 9 127 17.0 17.0 17.0 0.5 155 chr3R 25638818 intron jigr1 + chr3R 25638896 intron jigr1 + chr3R 25638973 intron jigr1 + chr3R_9_25635001 chr3R_25635001 RAL-913 4356 chr3R 25642555 25642618 chr3R 25642696 25642754 24 139 22.5 22.5 22.5 1.0 199 chr3R 25642555 intron jigr1 + chr3R 25642654 intron jigr1 + chr3R 25642754 intron jigr1 + chr3R_24_25640001 chr3R_25640001 RAL-913 4357 chr3R 25650991 25651042 chr3R 25651120 25651155 7 125 29.0 31.0 30.0 0.2 164 chr3R 25650991 intergenic mir-92b + chr3R 25651073 intergenic mir-92b + chr3R 25651155 intergenic mir-92b + chr3R_7_25650001 chr3R_25650001 RAL-913 4358 chr3R 25652274 25652344 chr3R 25652401 25652436 17 125 27.5 28.0 27.8 0.6 162 chr3R 25652274 intergenic not near genes chr3R 25652355 intergenic not near genes chr3R 25652436 intergenic not near genes chr3R_17_25650001 chr3R_25650001 RAL-913 4359 chr3R 25658714 25658784 chr3R 25658843 25658913 17 129 29.0 28.0 28.5 0.6 199 chr3R 25658714 intron Tnks - chr3R 25658814 intron Tnks - chr3R 25658913 intron Tnks - chr3R_17_25655001 chr3R_25655001 RAL-913 4360 chr3R 25661230 25661298 chr3R 25661358 25661427 15 126 16.5 18.0 17.2 0.8 197 chr3R 25661230 5` UTR Tnks - chr3R 25661328 intergenic Tnks -,CR45208 -,RASSF8 + chr3R 25661427 intergenic Tnks -,CR45208 -,RASSF8 + chr3R_15_25660001 chr3R_25660001 RAL-913 4361 chr3R 25669021 25669098 chr3R 25669165 25669217 12 137 24.5 16.5 20.5 0.6 196 chr3R 25669021 intron Lgr3 + chr3R 25669119 intron Lgr3 + chr3R 25669217 exon Lgr3 + chr3R_12_25665001 chr3R_25665001 RAL-913 4362 chr3R 25687688 25687889 chr3R 25687814 25688024 8 134 9.0 9.5 9.2 0.8 336 chr3R 25687688 intergenic CLS - chr3R 25687856 intergenic CLS - chr3R 25688024 intergenic not near genes chr3R_8_25685001 chr3R_25685001 RAL-913 4363 chr3R 25699813 25699869 chr3R 25699946 25700002 16 132 29.0 28.5 28.8 0.5 189 chr3R 25699813 3` UTR LpR2 - chr3R 25699908 3` UTR LpR2 - chr3R 25700002 exon LpR2 - chr3R_16_25695001 chr3R_25695001 RAL-913 4364 chr3R 25701852 25701928 chr3R 25702042 25702125 25 193 17.5 20.0 18.8 1.3 273 chr3R 25701852 intron LpR2 - chr3R 25701988 intron LpR2 - chr3R 25702125 intron LpR2 - chr3R_25_25700001 chr3R_25700001 RAL-913 4365 chr3R 25722671 25722730 chr3R 25722806 25722865 14 132 26.0 30.0 28.0 0.5 194 chr3R 25722671 intron LpR2 - chr3R 25722768 intron LpR2 - chr3R 25722865 intron LpR2 - chr3R_14_25720001 chr3R_25720001 RAL-913 4366 chr3R 25725783 25725847 chr3R 25734993 25735057 roo 40 9210 9.5 6.5 8.0 4.4 9274 chr3R 25725783 intron LpR2 - chr3R 25730420 intron LpR2 - chr3R 25735057 intron LpR2 - chr3R_40_25730001 chr3R_25730001 RAL-913 4367 chr3R 25764489 25764508 chr3R 25764615 25764634 6 126 14.5 0.0 7.2 0.7 145 chr3R 25764489 intergenic not near genes chr3R 25764562 intergenic not near genes chr3R 25764634 intergenic not near genes chr3R_6_25760001 chr3R_25760001 RAL-913 4368 chr3R 25767638 25767674 chr3R 25767770 25767806 7 132 23.5 27.5 25.5 0.3 168 chr3R 25767638 intergenic not near genes chr3R 25767722 intergenic not near genes chr3R 25767806 intergenic not near genes chr3R_7_25765001 chr3R_25765001 RAL-913 4369 chr3R 25796292 25796412 chr3R 25796430 25796541 25 132 13.5 12.0 12.8 1.8 249 chr3R 25796292 intergenic CR43847 - chr3R 25796416 intergenic CR43847 - chr3R 25796541 intergenic CR43847 - chr3R_25_25795001 chr3R_25795001 RAL-913 4370 chr3R 25827600 25827620 chr3R 25827730 25827750 4 128 26.5 29.0 27.8 0.1 150 chr3R 25827600 intergenic not near genes chr3R 25827675 intergenic not near genes chr3R 25827750 intergenic not near genes chr3R_4_25825001 chr3R_25825001 RAL-913 4371 chr3R 25831009 25831065 chr3R 25831136 25831193 12 128 15.0 9.0 12.0 0.9 184 chr3R 25831009 intergenic Mst57Db - chr3R 25831101 intergenic Mst57Db -,Mst57Da - chr3R 25831193 intergenic Mst57Db -,Mst57Da - chr3R_12_25830001 chr3R_25830001 RAL-913 4372 chr3R 25832656 25832717 chr3R 25841888 25841934 roo 18 9227 5.5 7.0 6.2 2.5 9278 chr3R 25832656 exon alpha4GT2 + chr3R 25837295 intron alpha4GT2 + chr3R 25841934 exon alpha4GT2 + chr3R_18_25835001 chr3R_25835001 RAL-913 4373 chr3R 25843599 25843663 chr3R 25843779 25843843 18 179 17.5 23.0 20.2 0.8 244 chr3R 25843599 intergenic CR45653 + chr3R 25843721 intergenic CR45653 + chr3R 25843843 intergenic CR45653 + chr3R_18_25840001 chr3R_25840001 RAL-913 4374 chr3R 25861774 25861849 chr3R 25861901 25861976 21 127 17.0 15.0 16.0 1.2 202 chr3R 25861774 intron CG5890 + chr3R 25861875 intron CG5890 + chr3R 25861976 intron CG5890 + chr3R_21_25860001 chr3R_25860001 RAL-913 4375 chr3R 25927462 25927537 chr3R 25927594 25927667 22 132 20.5 17.0 18.8 1.1 205 chr3R 25927462 intron CCAP-R - chr3R 25927564 intron CCAP-R - chr3R 25927667 intron CCAP-R - chr3R_22_25925001 chr3R_25925001 RAL-913 4376 chr3R 25956429 25956486 chr3R 25956565 25956629 4 137 19.0 10.0 14.5 0.3 200 chr3R 25956429 intergenic CCAP-R - chr3R 25956529 intergenic CCAP-R - chr3R 25956629 intergenic CCAP-R - chr3R_4_25955001 chr3R_25955001 RAL-913 4377 chr3R 25971026 25971035 chr3R 25971156 25971165 5 130 26.0 18.0 22.0 0.2 139 chr3R 25971026 intron CG42261 + chr3R 25971096 intron CG42261 + chr3R 25971165 intron CG42261 + chr3R_5_25970001 chr3R_25970001 RAL-913 4378 chr3R 25983648 25983723 chr3R 25983796 25983871 32 144 4.0 8.5 6.2 4.4 223 chr3R 25983648 exon Nf1 + chr3R 25983760 intron Nf1 + chr3R 25983871 exon Nf1 + chr3R_32_25980001 chr3R_25980001 RAL-913 4379 chr3R 26018659 26018685 chr3R 26018787 26018823 5 135 23.0 21.5 22.2 0.2 164 chr3R 26018659 3` UTR CR43643 - chr3R 26018741 3` UTR CR43643 - chr3R 26018823 3` UTR CR43643 - chr3R_5_26015001 chr3R_26015001 RAL-913 4380 chr3R 26038927 26038998 chr3R 26039114 26039185 10 186 30.5 22.5 26.5 0.4 258 chr3R 26038927 intergenic not near genes chr3R 26039056 intergenic not near genes chr3R 26039185 intergenic not near genes chr3R_10_26035001 chr3R_26035001 RAL-913 4381 chr3R 26041142 26041178 chr3R 26041295 26041331 16 153 8.5 10.5 9.5 1.5 189 chr3R 26041142 intergenic E(spl)m8-HLH + chr3R 26041236 intergenic E(spl)m8-HLH +,gro + chr3R 26041331 intergenic E(spl)m8-HLH +,gro + chr3R_16_26040001 chr3R_26040001 RAL-913 4382 chr3R 26063165 26063198 chr3R 26063309 26063342 14 143 21.5 14.5 18.0 0.7 177 chr3R 26063165 intergenic CG14551 - chr3R 26063254 intergenic CG14551 - chr3R 26063342 intergenic CG14551 - chr3R_14_26060001 chr3R_26060001 RAL-913 4383 chr3R 26088766 26088831 chr3R 26088892 26088957 6 126 14.0 14.0 14.0 0.4 191 chr3R 26088766 intron dys - chr3R 26088862 intron dys - chr3R 26088957 intron dys - chr3R_6_26085001 chr3R_26085001 RAL-913 4384 chr3R 26093811 26093856 chr3R 26093922 26093983 7 123 31.0 30.0 30.5 0.2 172 chr3R 26093811 intron dys - chr3R 26093897 intron dys - chr3R 26093983 intron dys - chr3R_7_26090001 chr3R_26090001 RAL-913 4385 chr3R 26122413 26122480 chr3R 26122539 26122606 35 125 12.5 7.5 10.0 3.2 193 chr3R 26122413 intron CG31324 + chr3R 26122510 intron CG31324 + chr3R 26122606 intron CG31324 + chr3R_35_26120001 chr3R_26120001 RAL-913 4386 chr3R 26126498 26126569 chr3R 26126634 26126704 13 136 20.5 21.0 20.8 0.6 206 chr3R 26126498 intron CG31324 + chr3R 26126601 intron CG31324 + chr3R 26126704 intron,5` UTR CG31324 +,CG14556 + chr3R_13_26125001 chr3R_26125001 RAL-913 4387 chr3R 26143053 26143097 chr3R 26143186 26143230 10 133 44.5 48.5 46.5 0.2 177 chr3R 26143053 intergenic not near genes chr3R 26143142 intergenic not near genes chr3R 26143230 intergenic not near genes chr3R_10_26140001 chr3R_26140001 RAL-913 4388 chr3R 26144662 26144723 chr3R 26144790 26144837 8 126 42.5 44.0 43.2 0.2 175 chr3R 26144662 intergenic not near genes chr3R 26144750 intergenic not near genes chr3R 26144837 intergenic not near genes chr3R_8_26140001 chr3R_26140001 RAL-913 4389 chr3R 26153046 26153053 chr3R 26153182 26153189 4 136 30.0 41.0 35.5 0.1 143 chr3R 26153046 intergenic not near genes chr3R 26153118 intergenic not near genes chr3R 26153189 intergenic not near genes chr3R_4_26150001 chr3R_26150001 RAL-913 4390 chr3R 26210394 26210467 chr3R 26210648 26210721 12 252 17.5 26.0 21.8 0.5 327 chr3R 26210394 intergenic CR44320 + chr3R 26210558 intergenic CR44320 + chr3R 26210721 intergenic not near genes chr3R_12_26210001 chr3R_26210001 RAL-913 4391 chr3R 26215771 26215794 chr3R 26221761 26221793 297 6 6000 7.5 8.0 7.8 0.7 6022 chr3R 26215771 intergenic not near genes chr3R 26218782 intergenic not near genes chr3R 26221793 intergenic not near genes chr3R_6_26215001 chr3R_26215001 RAL-913 4392 chr3R 26226950 26226989 chr3R 26227107 26227123 10 155 29.5 25.5 27.5 0.4 173 chr3R 26226950 intergenic not near genes chr3R 26227036 intergenic not near genes chr3R 26227123 intergenic not near genes chr3R_10_26225001 chr3R_26225001 RAL-913 4393 chr3R 26263675 26263743 chr3R 26264108 26264176 11 433 33.0 29.0 31.0 0.3 501 chr3R 26263675 intron CG6154 + chr3R 26263926 intron CG6154 + chr3R 26264176 intron CG6154 + chr3R_11_26260001 chr3R_26260001 RAL-913 4394 chr3R 26284186 26284256 chr3R 26284345 26284375 15 156 10.0 16.5 13.2 1.1 189 chr3R 26284186 intergenic not near genes chr3R 26284280 intergenic not near genes chr3R 26284375 intergenic not near genes chr3R_15_26280001 chr3R_26280001 RAL-913 4395 chr3R 26292068 26292115 chr3R 26292198 26292245 11 130 27.0 27.0 27.0 0.4 177 chr3R 26292068 intergenic not near genes chr3R 26292156 intergenic not near genes chr3R 26292245 intergenic not near genes chr3R_11_26290001 chr3R_26290001 RAL-913 4396 chr3R 26325316 26325394 chr3R 26325453 26325538 19 139 20.0 14.0 17.0 1.1 222 chr3R 26325316 intron CG33970 + chr3R 26325427 intron CG33970 + chr3R 26325538 intron CG33970 + chr3R_19_26325001 chr3R_26325001 RAL-913 4397 chr3R 26326647 26326674 chr3R 26326775 26326802 12 126 9.0 15.5 12.2 0.9 155 chr3R 26326647 intron CG33970 + chr3R 26326724 intron CG33970 + chr3R 26326802 intron CG33970 + chr3R_12_26325001 chr3R_26325001 RAL-913 4398 chr3R 26339193 26339251 chr3R 26339338 26339395 11 145 24.5 25.5 25.0 0.4 202 chr3R 26339193 intron CG33970 + chr3R 26339294 intron CG33970 + chr3R 26339395 intron CG33970 + chr3R_11_26335001 chr3R_26335001 RAL-913 4399 chr3R 26349214 26349223 chr3R 26349365 26349373 5 150 17.5 0.0 8.8 0.5 159 chr3R 26349214 intron CG33970 + chr3R 26349294 intron CG33970 + chr3R 26349373 intron CG33970 + chr3R_5_26345001 chr3R_26345001 RAL-913 4400 chr3R 26365068 26365135 chr3R 26365203 26365269 15 134 18.5 17.0 17.8 0.8 201 chr3R 26365068 intergenic not near genes chr3R 26365168 intergenic not near genes chr3R 26365269 intergenic not near genes chr3R_15_26365001 chr3R_26365001 RAL-913 4401 chr3R 26370273 26370353 chr3R 26370424 26370488 24 138 18.0 19.5 18.8 1.2 215 chr3R 26370273 intergenic not near genes chr3R 26370380 intergenic not near genes chr3R 26370488 intergenic not near genes chr3R_24_26370001 chr3R_26370001 RAL-913 4402 chr3R 26376278 26376352 chr3R 26385488 26385576 roo 26 9210 9.0 0.0 4.5 4.7 9298 chr3R 26376278 intergenic not near genes chr3R 26380927 intergenic not near genes chr3R 26385576 intergenic not near genes chr3R_26_26380001 chr3R_26380001 RAL-913 4403 chr3R 26405874 26405939 chr3R 26406000 26406065 31 126 0.0 0.0 0.0 31.0 191 chr3R 26405874 intergenic not near genes chr3R 26405970 intergenic not near genes chr3R 26406065 intergenic not near genes chr3R_31_26405001 chr3R_26405001 RAL-913 4404 chr3R 26413251 26413256 chr3R 26413398 26413403 4 146 21.5 24.0 22.8 0.2 152 chr3R 26413251 intergenic not near genes chr3R 26413327 intergenic not near genes chr3R 26413403 intergenic not near genes chr3R_4_26410001 chr3R_26410001 RAL-913 4405 chr3R 26413284 26413288 chr3R 26413367 26413435 4 131 21.0 19.5 20.2 0.2 151 chr3R 26413284 intergenic not near genes chr3R 26413360 intergenic not near genes chr3R 26413435 intergenic not near genes chr3R_4_26410001 chr3R_26410001 RAL-913 4406 chr3R 26453208 26453251 chr3R 26453341 26453384 10 133 25.5 30.0 27.8 0.3 176 chr3R 26453208 exon CG5447 + chr3R 26453296 intron CG5447 + chr3R 26453384 intron CG5447 + chr3R_10_26450001 chr3R_26450001 RAL-913 4407 chr3R 26508105 26508171 chr3R 26508281 26508305 6 158 20.0 19.5 19.8 0.3 200 chr3R 26508105 intron plum - chr3R 26508205 intron plum - chr3R 26508305 intron plum - chr3R_6_26505001 chr3R_26505001 RAL-913 4408 chr3R 26510471 26510534 chr3R 26519576 26519639 roo 20 9107 2.5 11.5 7.0 2.5 9168 chr3R 26510471 intron plum - chr3R 26515055 intron plum - chr3R 26519639 intron,5` UTR plum -,CR45226 + chr3R_20_26515001 chr3R_26515001 RAL-913 4409 chr3R 26529305 26529354 chr3R 26529438 26529487 14 133 22.5 13.0 17.8 0.7 182 chr3R 26529305 intron plum - chr3R 26529396 intron plum - chr3R 26529487 intron plum - chr3R_14_26525001 chr3R_26525001 RAL-913 4410 chr3R 26540957 26541026 chr3R 26541086 26541155 10 129 29.5 28.5 29.0 0.3 198 chr3R 26540957 intron scrib + chr3R 26541056 intron scrib + chr3R 26541155 intron scrib + chr3R_10_26540001 chr3R_26540001 RAL-913 4411 chr3R 26558282 26558349 chr3R 26565645 26565711 Stalker4 15 7357 12.5 9.5 11.0 1.2 7429 chr3R 26558282 intron scrib + chr3R 26561996 intron scrib + chr3R 26565711 intron scrib + chr3R_15_26560001 chr3R_26560001 RAL-913 4412 chr3R 26611303 26611358 chr3R 26611429 26611484 9 126 21.0 25.0 23.0 0.4 181 chr3R 26611303 intergenic not near genes chr3R 26611394 intergenic not near genes chr3R 26611484 intergenic not near genes chr3R_9_26610001 chr3R_26610001 RAL-913 4413 chr3R 26641588 26641660 chr3R 26641725 26641785 27 135 12.5 7.0 9.8 2.5 197 chr3R 26641588 intergenic not near genes chr3R 26641686 intergenic not near genes chr3R 26641785 intergenic not near genes chr3R_27_26640001 chr3R_26640001 RAL-913 4414 chr3R 26642698 26642754 chr3R 26643131 26643198 jockey 35 441 13.5 10.0 11.8 2.7 500 chr3R 26642698 intergenic not near genes chr3R 26642948 intergenic not near genes chr3R 26643198 intergenic not near genes chr3R_35_26640001 chr3R_26640001 RAL-913 4415 chr3R 26656599 26656643 chr3R 26656762 26656792 4 167 18.5 14.5 16.5 0.2 193 chr3R 26656599 intron,intron beat-VII -,Tb + chr3R 26656696 intron,exon beat-VII -,Tb + chr3R 26656792 intron,exon beat-VII -,Tb + chr3R_4_26655001 chr3R_26655001 RAL-913 4416 chr3R 26661282 26661349 chr3R 26661422 26661489 5 140 23.0 23.5 23.2 0.2 207 chr3R 26661282 intron beat-VII - chr3R 26661386 intron beat-VII - chr3R 26661489 intron beat-VII - chr3R_5_26660001 chr3R_26660001 RAL-913 4417 chr3R 26669616 26669683 chr3R 26669748 26669815 23 132 18.0 18.0 18.0 1.2 199 chr3R 26669616 intron beat-VII - chr3R 26669716 intron beat-VII - chr3R 26669815 intron beat-VII - chr3R_23_26665001 chr3R_26665001 RAL-913 4418 chr3R 26688828 26688863 chr3R 26688956 26688991 8 128 21.0 18.5 19.8 0.4 163 chr3R 26688828 intergenic not near genes chr3R 26688910 intergenic not near genes chr3R 26688991 intergenic not near genes chr3R_8_26685001 chr3R_26685001 RAL-913 4419 chr3R 26704756 26704803 chr3R 26704877 26704935 11 127 24.0 25.0 24.5 0.4 179 chr3R 26704756 intron amon - chr3R 26704846 intron amon - chr3R 26704935 intron amon - chr3R_11_26700001 chr3R_26700001 RAL-913 4420 chr3R 26740238 26740315 chr3R 26740364 26740441 16 123 13.0 14.5 13.8 1.1 203 chr3R 26740238 intergenic not near genes chr3R 26740340 intergenic not near genes chr3R 26740441 intergenic not near genes chr3R_16_26740001 chr3R_26740001 RAL-913 4421 chr3R 26751051 26751076 chr3R 26751192 26751217 13 140 17.5 23.0 20.2 0.6 166 chr3R 26751051 intergenic not near genes chr3R 26751134 intergenic not near genes chr3R 26751217 intergenic not near genes chr3R_13_26750001 chr3R_26750001 RAL-913 4422 chr3R 26770200 26770260 chr3R 26770327 26770387 16 124 35.0 27.5 31.2 0.5 187 chr3R 26770200 intergenic CR45563 + chr3R 26770294 intergenic CR45563 + chr3R 26770387 intergenic not near genes chr3R_16_26770001 chr3R_26770001 RAL-913 4423 chr3R 26810512 26810576 chr3R 26811042 26811111 roo 24 533 7.5 12.5 10.0 2.2 599 chr3R 26810512 intron Tl + chr3R 26810812 intron Tl + chr3R 26811111 intron Tl + chr3R_24_26810001 chr3R_26810001 RAL-913 4424 chr3R 26814624 26814680 chr3R 26814750 26814800 22 125 23.0 25.5 24.2 0.9 176 chr3R 26814624 intron Tl + chr3R 26814712 intron Tl + chr3R 26814800 intron Tl + chr3R_22_26810001 chr3R_26810001 RAL-913 4425 chr3R 26825012 26825079 chr3R 26825138 26825205 8 126 27.5 28.0 27.8 0.3 193 chr3R 26825012 intron Tl + chr3R 26825108 intron Tl + chr3R 26825205 intron Tl + chr3R_8_26825001 chr3R_26825001 RAL-913 4426 chr3R 26831762 26831791 chr3R 26831936 26832005 8 209 16.5 24.0 20.2 0.4 243 chr3R 26831762 intron Tl + chr3R 26831884 intron Tl + chr3R 26832005 intron Tl + chr3R_8_26830001 chr3R_26830001 RAL-913 4427 chr3R 26845545 26845596 chr3R 26845655 26845726 6 127 17.5 20.5 19.0 0.3 181 chr3R 26845545 intron Lerp - chr3R 26845636 intron Lerp - chr3R 26845726 intron Lerp - chr3R_6_26845001 chr3R_26845001 RAL-913 4428 chr3R 26852458 26852499 chr3R 26852595 26852636 4 137 22.5 29.0 25.8 0.1 178 chr3R 26852458 intron Lerp - chr3R 26852547 intron Lerp - chr3R 26852636 intron Lerp - chr3R_4_26850001 chr3R_26850001 RAL-913 4429 chr3R 26857222 26857272 chr3R 26857367 26857416 14 144 29.5 34.5 32.0 0.4 194 chr3R 26857222 intron Lerp - chr3R 26857319 intron Lerp - chr3R 26857416 intron Lerp - chr3R_14_26855001 chr3R_26855001 RAL-913 4430 chr3R 26896736 26896805 chr3R 26896864 26896933 7 128 27.5 29.0 28.2 0.2 197 chr3R 26896736 intron T48 + chr3R 26896834 intron T48 + chr3R 26896933 intron T48 + chr3R_7_26895001 chr3R_26895001 RAL-913 4431 chr3R 27007362 27007427 chr3R 27016547 27016611 roo 32 9185 12.5 10.5 11.5 2.6 9249 chr3R 27007362 intron RYa-R + chr3R 27011986 intron RYa-R + chr3R 27016611 intron RYa-R + chr3R_32_27010001 chr3R_27010001 RAL-913 4432 chr3R 27027637 27027720 chr3R 27027771 27027804 10 129 20.5 18.5 19.5 0.5 167 chr3R 27027637 intron RYa-R + chr3R 27027720 intron RYa-R + chr3R 27027804 intron RYa-R + chr3R_10_27025001 chr3R_27025001 RAL-913 4433 chr3R 27028677 27028756 chr3R 27028806 27028885 33 129 10.5 9.5 10.0 3.0 208 chr3R 27028677 exon RYa-R + chr3R 27028781 intron RYa-R + chr3R 27028885 intron RYa-R + chr3R_33_27025001 chr3R_27025001 RAL-913 4434 chr3R 27102009 27102060 chr3R 27102153 27102204 10 144 25.0 13.5 19.2 0.5 195 chr3R 27102009 intron CG17189 + chr3R 27102106 intron CG17189 + chr3R 27102204 intron CG17189 + chr3R_10_27100001 chr3R_27100001 RAL-913 4435 chr3R 27140475 27140539 chr3R 27148135 27148199 412 28 7659 14.0 7.5 10.8 2.4 7724 chr3R 27140475 intron CG6051 - chr3R 27144337 intron CG6051 - chr3R 27148199 intron CG6051 - chr3R_28_27140001 chr3R_27140001 RAL-913 4436 chr3R 27301228 27301294 chr3R 27301365 27301431 23 137 20.5 21.0 20.8 1.1 203 chr3R 27301228 intron CG3339 - chr3R 27301330 intron CG3339 - chr3R 27301431 intron CG3339 - chr3R_23_27300001 chr3R_27300001 RAL-913 4437 chr3R 27315913 27315937 chr3R 27316053 27316078 9 137 2.0 11.0 6.5 1.2 165 chr3R 27315913 intron CG3339 - chr3R 27315996 intron CG3339 - chr3R 27316078 intron CG3339 - chr3R_9_27315001 chr3R_27315001 RAL-913 4438 chr3R 27327380 27327458 chr3R 27327507 27327587 7 119 19.5 23.5 21.5 0.3 207 chr3R 27327380 intergenic not near genes chr3R 27327484 intergenic not near genes chr3R 27327587 intergenic not near genes chr3R_7_27325001 chr3R_27325001 RAL-913 4439 chr3R 27329429 27329496 chr3R 27329556 27329623 18 127 14.5 14.5 14.5 1.2 194 chr3R 27329429 intergenic CG3330 - chr3R 27329526 intergenic CG3330 - chr3R 27329623 intergenic CG3330 - chr3R_18_27325001 chr3R_27325001 RAL-913 4440 chr3R 27342754 27342821 chr3R 27351385 27351402 Tirant 30 8628 8.5 12.5 10.5 2.6 8648 chr3R 27342754 intron CG42534 + chr3R 27347078 intron CG42534 + chr3R 27351402 intron CG42534 + chr3R_30_27345001 chr3R_27345001 RAL-913 4441 chr3R 27354053 27354111 chr3R 27354207 27354265 11 152 17.0 18.5 17.8 0.6 212 chr3R 27354053 intron CG42534 + chr3R 27354159 intron CG42534 + chr3R 27354265 intron CG42534 + chr3R_11_27350001 chr3R_27350001 RAL-913 4442 chr3R 27377425 27377502 chr3R 27377563 27377621 30 134 7.0 7.0 7.0 3.8 196 chr3R 27377425 3` UTR side - chr3R 27377523 3` UTR side - chr3R 27377621 3` UTR side - chr3R_30_27375001 chr3R_27375001 RAL-913 4443 chr3R 27385655 27385714 chr3R 27385971 27386035 16 320 19.5 16.0 17.8 0.9 380 chr3R 27385655 intron side - chr3R 27385845 intron side - chr3R 27386035 intron side - chr3R_16_27385001 chr3R_27385001 RAL-913 4444 chr3R 27393704 27393773 chr3R 27393834 27393867 8 125 27.5 26.0 26.8 0.3 163 chr3R 27393704 intron side - chr3R 27393786 intron side - chr3R 27393867 intron side - chr3R_8_27390001 chr3R_27390001 RAL-913 4445 chr3R 27458756 27458773 chr3R 27458883 27458890 4 124 27.5 22.5 25.0 0.2 134 chr3R 27458756 intergenic not near genes chr3R 27458823 intergenic not near genes chr3R 27458890 intergenic not near genes chr3R_4_27455001 chr3R_27455001 RAL-913 4446 chr3R 27473895 27473917 chr3R 27473981 27474009 4 108 10.0 9.0 9.5 0.4 114 chr3R 27473895 intergenic not near genes chr3R 27473952 intergenic not near genes chr3R 27474009 intergenic not near genes chr3R_4_27470001 chr3R_27470001 RAL-913 4447 chr3R 27486814 27486833 chr3R 27486942 27486973 5 138 3.5 5.5 4.5 0.9 159 chr3R 27486814 intergenic not near genes chr3R 27486894 intergenic not near genes chr3R 27486973 intergenic not near genes chr3R_5_27485001 chr3R_27485001 RAL-913 4448 chr3R 27492331 27492407 chr3R 27492468 27492547 35 136 15.5 18.0 16.8 2.0 216 chr3R 27492331 intergenic not near genes chr3R 27492439 intergenic not near genes chr3R 27492547 intergenic not near genes chr3R_35_27490001 chr3R_27490001 RAL-913 4449 chr3R 27496541 27496599 chr3R 27496696 27496754 10 155 8.5 10.5 9.5 1.0 213 chr3R 27496541 intergenic not near genes chr3R 27496648 intergenic not near genes chr3R 27496754 intergenic not near genes chr3R_10_27495001 chr3R_27495001 RAL-913 4450 chr3R 27506257 27506275 chr3R 27506389 27506407 4 132 28.5 26.5 27.5 0.1 150 chr3R 27506257 intergenic not near genes chr3R 27506332 intergenic not near genes chr3R 27506407 intergenic not near genes chr3R_4_27505001 chr3R_27505001 RAL-913 4451 chr3R 27520123 27520191 chr3R 27520251 27520319 13 122 15.5 12.0 13.8 0.9 196 chr3R 27520123 intergenic not near genes chr3R 27520221 intergenic not near genes chr3R 27520319 intergenic not near genes chr3R_13_27520001 chr3R_27520001 RAL-913 4452 chr3R 27521116 27521174 chr3R 27530375 27530433 roo 20 9259 12.0 16.0 14.0 1.3 9317 chr3R 27521116 intron CG12885 + chr3R 27525774 intron CG12885 + chr3R 27530433 intron CG12885 + chr3R_20_27525001 chr3R_27525001 RAL-913 4453 chr3R 27546321 27546389 chr3R 27546657 27546730 20 336 17.5 13.5 15.5 1.2 409 chr3R 27546321 exon Gr98d + chr3R 27546526 exon Gr98d + chr3R 27546730 exon Gr98d + chr3R_20_27545001 chr3R_27545001 RAL-913 4454 chr3R 27547674 27547735 chr3R 27554295 27554355 8 6621 35.0 44.5 39.8 0.2 6681 chr3R 27547674 intergenic Klp98A -,Gr98d + chr3R 27551014 exon Klp98A - chr3R 27554355 intron Klp98A - chr3R_8_27550001 chr3R_27550001 RAL-913 4455 chr3R 27570185 27570241 chr3R 27570364 27570419 8 176 13.5 16.0 14.8 0.5 234 chr3R 27570185 intron wdb - chr3R 27570302 intron wdb - chr3R 27570419 intron wdb - chr3R_8_27570001 chr3R_27570001 RAL-913 4456 chr3R 27577373 27577436 chr3R 27577493 27577568 22 129 18.5 16.5 17.5 1.2 195 chr3R 27577373 intron wdb - chr3R 27577470 intron wdb - chr3R 27577568 intron wdb - chr3R_22_27575001 chr3R_27575001 RAL-913 4457 chr3R 27627045 27627114 chr3R 27627197 27627260 17 149 11.0 6.5 8.8 1.7 215 chr3R 27627045 intron Tusp + chr3R 27627152 intron Tusp + chr3R 27627260 intron Tusp + chr3R_17_27625001 chr3R_27625001 RAL-913 4458 chr3R 27685739 27685743 chr3R 27685866 27685872 4 128 22.0 20.5 21.2 0.2 133 chr3R 27685739 3` UTR CG31055 - chr3R 27685806 3` UTR CG31055 - chr3R 27685872 3` UTR CG31055 - chr3R_4_27685001 chr3R_27685001 RAL-913 4459 chr3R 27685744 27685793 chr3R 27685853 27685907 6 121 19.5 19.5 19.5 0.3 163 chr3R 27685744 3` UTR CG31055 - chr3R 27685826 3` UTR CG31055 - chr3R 27685907 3` UTR CG31055 - chr3R_6_27685001 chr3R_27685001 RAL-913 4460 chr3R 27705320 27705384 chr3R 27705438 27705514 20 129 8.0 5.5 6.8 2.6 194 chr3R 27705320 exon CG12428 - chr3R 27705417 intron CG12428 - chr3R 27705514 exon CG12428 - chr3R_20_27705001 chr3R_27705001 RAL-913 4461 chr3R 27725537 27725584 chr3R 27731029 27731076 I-element 15 5492 9.0 10.5 9.8 1.4 5539 chr3R 27725537 intergenic not near genes chr3R 27728306 intergenic not near genes chr3R 27731076 intergenic not near genes chr3R_15_27725001 chr3R_27725001 RAL-913 4462 chr3R 27765891 27765945 chr3R 27766132 27766202 6 250 14.5 9.5 12.0 0.5 311 chr3R 27765891 intergenic not near genes chr3R 27766046 intergenic not near genes chr3R 27766202 intergenic not near genes chr3R_6_27765001 chr3R_27765001 RAL-913 4463 chr3R 27779219 27779281 chr3R 27779349 27779411 10 127 12.5 15.0 13.8 0.7 192 chr3R 27779219 exon CG34353 - chr3R 27779315 intron CG34353 - chr3R 27779411 intron CG34353 - chr3R_10_27775001 chr3R_27775001 RAL-913 4464 chr3R 27789048 27789106 chr3R 27789170 27789224 18 124 15.5 15.0 15.2 1.1 176 chr3R 27789048 exon CG34353 - chr3R 27789136 intron CG34353 - chr3R 27789224 intron CG34353 - chr3R_18_27785001 chr3R_27785001 RAL-913 4465 chr3R 27799891 27799964 chr3R 27800023 27800096 31 132 5.0 8.5 6.8 4.0 205 chr3R 27799891 intron CG34353 - chr3R 27799994 intron CG34353 - chr3R 27800096 intron CG34353 - chr3R_31_27795001 chr3R_27795001 RAL-913 4466 chr3R 27820040 27820051 chr3R 27820163 27820187 7 130 7.0 11.5 9.2 0.7 147 chr3R 27820040 intron CG34353 - chr3R 27820114 intron CG34353 - chr3R 27820187 intron CG34353 - chr3R_7_27820001 chr3R_27820001 RAL-913 4467 chr3R 27840197 27840266 chr3R 27840366 27840438 8 169 27.0 28.5 27.8 0.3 241 chr3R 27840197 intron CG34353 - chr3R 27840318 intron CG34353 - chr3R 27840438 intron CG34353 - chr3R_8_27840001 chr3R_27840001 RAL-913 4468 chr3R 27856721 27856756 chr3R 27858254 27858289 hopper2 19 1532 12.5 13.0 12.8 1.4 1568 chr3R 27856721 intron CG34353 - chr3R 27857505 intron CG34353 - chr3R 27858289 intron CG34353 - chr3R_19_27855001 chr3R_27855001 RAL-913 4469 chr3R 27856758 27856780 chr3R 27858240 27858313 hopper2 11 1526 10.0 11.0 10.5 1.0 1555 chr3R 27856758 intron CG34353 - chr3R 27857536 intron CG34353 - chr3R 27858313 intron CG34353 - chr3R_11_27855001 chr3R_27855001 RAL-913 4470 chr3R 27862921 27862973 chr3R 27868265 27868328 Transpac 13 5348 6.5 9.5 8.0 1.4 5407 chr3R 27862921 intron CG34353 - chr3R 27865624 intron CG34353 - chr3R 27868328 intron CG34353 - chr3R_13_27865001 chr3R_27865001 RAL-913 4471 chr3R 27875660 27875723 chr3R 27882765 27882828 297 33 7103 9.0 10.0 9.5 3.1 7168 chr3R 27875660 intron CG34353 - chr3R 27879244 intron CG34353 - chr3R 27882828 intron CG34353 - chr3R_33_27875001 chr3R_27875001 RAL-913 4472 chr3R 27904568 27904643 chr3R 27904699 27904777 16 133 14.5 10.0 12.2 1.2 209 chr3R 27904568 intron CG34353 - chr3R 27904672 intron CG34353 - chr3R 27904777 intron CG34353 - chr3R_16_27900001 chr3R_27900001 RAL-913 4473 chr3R 27973815 27973882 chr3R 27973946 27974013 12 131 16.0 18.0 17.0 0.7 198 chr3R 27973815 intron betaTub97EF - chr3R 27973914 intron betaTub97EF - chr3R 27974013 intron betaTub97EF - chr3R_12_27970001 chr3R_27970001 RAL-913 4474 chr3R 27983264 27983305 chr3R 27983390 27983431 8 126 26.0 30.5 28.2 0.3 167 chr3R 27983264 intron betaTub97EF - chr3R 27983348 intron betaTub97EF - chr3R 27983431 intron betaTub97EF - chr3R_8_27980001 chr3R_27980001 RAL-913 4475 chr3R 28017942 28017973 chr3R 28018041 28018114 8 128 17.0 15.5 16.2 0.5 172 chr3R 28017942 intergenic not near genes chr3R 28018028 intergenic not near genes chr3R 28018114 intergenic not near genes chr3R_8_28015001 chr3R_28015001 RAL-913 4476 chr3R 28019543 28019588 chr3R 28019685 28019730 6 142 29.5 26.0 27.8 0.2 187 chr3R 28019543 intergenic not near genes chr3R 28019636 intergenic not near genes chr3R 28019730 intergenic not near genes chr3R_6_28015001 chr3R_28015001 RAL-913 4477 chr3R 28068452 28068518 chr3R 28073944 28074010 I-element 10 5487 0.5 10.0 5.2 1.6 5558 chr3R 28068452 intron CG34362 + chr3R 28071231 intron CG34362 + chr3R 28074010 intron CG34362 + chr3R_10_28070001 chr3R_28070001 RAL-913 4478 chr3R 28131383 28131453 chr3R 28131616 28131685 13 232 7.0 16.0 11.5 1.0 302 chr3R 28131383 intergenic not near genes chr3R 28131534 intergenic not near genes chr3R 28131685 intergenic not near genes chr3R_13_28130001 chr3R_28130001 RAL-913 4479 chr3R 28152307 28152351 chr3R 28152434 28152478 6 126 12.5 10.5 11.5 0.5 171 chr3R 28152307 intron CG34354 + chr3R 28152392 intron CG34354 + chr3R 28152478 intron CG34354 + chr3R_6_28150001 chr3R_28150001 RAL-913 4480 chr3R 28164840 28164909 chr3R 28164968 28165037 7 128 17.0 14.0 15.5 0.4 197 chr3R 28164840 intron CG34354 + chr3R 28164938 intron CG34354 + chr3R 28165037 intron CG34354 + chr3R_7_28160001 chr3R_28160001 RAL-913 4481 chr3R 28172823 28172866 chr3R 28173031 28173074 5 208 9.5 14.5 12.0 0.4 251 chr3R 28172823 intron CG34354 + chr3R 28172948 intron CG34354 + chr3R 28173074 intron CG34354 + chr3R_5_28170001 chr3R_28170001 RAL-913 4482 chr3R 28173621 28173698 chr3R 28181101 28181183 mdg1 26 7481 7.5 7.0 7.2 3.2 7562 chr3R 28173621 intron CG34354 + chr3R 28177402 intron CG34354 + chr3R 28181183 intron CG34354 + chr3R_26_28175001 chr3R_28175001 RAL-913 4483 chr3R 28253295 28253361 chr3R 28255855 28255865 jockey 26 2557 10.5 9.0 9.8 2.4 2570 chr3R 28253295 intergenic not near genes chr3R 28254580 intergenic not near genes chr3R 28255865 intergenic not near genes chr3R_26_28250001 chr3R_28250001 RAL-913 4484 chr3R 28275434 28275499 chr3R 28275750 28275823 10 319 25.5 33.5 29.5 0.3 389 chr3R 28275434 intergenic not near genes chr3R 28275628 intergenic not near genes chr3R 28275823 intergenic not near genes chr3R_10_28275001 chr3R_28275001 RAL-913 4485 chr3R 28282953 28283002 chr3R 28283632 28283681 16 679 22.5 25.5 24.0 0.6 728 chr3R 28282953 exon CG34436 + chr3R 28283317 exon CG34436 + chr3R 28283681 intergenic CG34437 +,CG34436 + chr3R_16_28280001 chr3R_28280001 RAL-913 4486 chr3R 28286277 28286349 chr3R 28286415 28286477 11 134 26.5 28.5 27.5 0.4 200 chr3R 28286277 intergenic not near genes chr3R 28286377 intergenic not near genes chr3R 28286477 intergenic not near genes chr3R_11_28285001 chr3R_28285001 RAL-913 4487 chr3R 28302059 28302120 chr3R 28302551 28302609 jockey 33 490 12.0 10.0 11.0 2.8 550 chr3R 28302059 intergenic not near genes chr3R 28302334 intergenic not near genes chr3R 28302609 intergenic not near genes chr3R_33_28300001 chr3R_28300001 RAL-913 4488 chr3R 28308035 28308079 chr3R 28308162 28308171 5 117 21.0 16.0 18.5 0.3 136 chr3R 28308035 intergenic not near genes chr3R 28308103 intergenic not near genes chr3R 28308171 intergenic not near genes chr3R_5_28305001 chr3R_28305001 RAL-913 4489 chr3R 28319305 28319337 chr3R 28319431 28319463 4 126 39.0 30.0 34.5 0.1 158 chr3R 28319305 3` UTR larp - chr3R 28319384 3` UTR larp - chr3R 28319463 3` UTR larp - chr3R_4_28315001 chr3R_28315001 RAL-913 4490 chr3R 28320569 28320594 chr3R 28320688 28320695 roo 5 117 26.5 18.0 22.2 0.2 126 chr3R 28320569 3` UTR larp - chr3R 28320632 exon larp - chr3R 28320695 exon larp - chr3R_5_28320001 chr3R_28320001 RAL-913 4491 chr3R 28331500 28331526 chr3R 28331629 28331655 8 129 22.5 26.5 24.5 0.3 155 chr3R 28331500 intron larp - chr3R 28331578 intron larp - chr3R 28331655 intron larp - chr3R_8_28330001 chr3R_28330001 RAL-913 4492 chr3R 28345606 28345665 chr3R 28345732 28345791 11 126 24.0 25.0 24.5 0.4 185 chr3R 28345606 intergenic Moca-cyp + chr3R 28345698 intergenic not near genes chr3R 28345791 intergenic not near genes chr3R_11_28345001 chr3R_28345001 RAL-913 4493 chr3R 28347801 28347814 chr3R 28347937 28347950 4 135 26.5 24.5 25.5 0.2 149 chr3R 28347801 intergenic not near genes chr3R 28347876 intergenic not near genes chr3R 28347950 intergenic not near genes chr3R_4_28345001 chr3R_28345001 RAL-913 4494 chr3R 28352359 28352389 chr3R 28352786 28352799 7 429 26.5 29.0 27.8 0.2 440 chr3R 28352359 exon Or98b + chr3R 28352579 intron Or98b + chr3R 28352799 intron Or98b + chr3R_7_28350001 chr3R_28350001 RAL-913 4495 chr3R 28368953 28369009 chr3R 28369087 28369143 10 133 26.5 34.5 30.5 0.3 190 chr3R 28368953 intergenic not near genes chr3R 28369048 intergenic not near genes chr3R 28369143 intergenic not near genes chr3R_10_28365001 chr3R_28365001 RAL-913 4496 chr3R 28393656 28393716 chr3R 28393806 28393866 9 150 32.0 33.5 32.8 0.3 210 chr3R 28393656 intergenic not near genes chr3R 28393761 intergenic not near genes chr3R 28393866 intergenic not near genes chr3R_9_28390001 chr3R_28390001 RAL-913 4497 chr3R 28410944 28411140 chr3R 28411086 28411266 22 135 5.0 10.5 7.8 2.5 322 chr3R 28410944 intergenic not near genes chr3R 28411105 intergenic not near genes chr3R 28411266 intergenic not near genes chr3R_22_28410001 chr3R_28410001 RAL-913 4498 chr3R 28424126 28424199 chr3R 28424265 28424338 20 139 20.0 22.5 21.2 0.9 212 chr3R 28424126 intron beat-VI + chr3R 28424232 intron beat-VI + chr3R 28424338 intron beat-VI + chr3R_20_28420001 chr3R_28420001 RAL-913 4499 chr3R 28441946 28442000 chr3R 28442086 28442145 15 142 8.5 7.0 7.8 1.7 199 chr3R 28441946 intron beat-VI + chr3R 28442046 intron beat-VI + chr3R 28442145 intron beat-VI + chr3R_15_28440001 chr3R_28440001 RAL-913 4500 chr3R 28480296 28480320 chr3R 28480427 28480451 10 131 24.0 24.0 24.0 0.4 155 chr3R 28480296 intergenic not near genes chr3R 28480374 intergenic not near genes chr3R 28480451 intergenic not near genes chr3R_10_28480001 chr3R_28480001 RAL-913 4501 chr3R 28484355 28484369 chr3R 28486222 28486237 30 1867 98.5 200.5 149.5 0.2 1882 chr3R 28484355 intergenic CG1894 + chr3R 28485296 exon CG1894 + chr3R 28486237 intergenic CG1894 + chr3R_30_28485001 chr3R_28485001 RAL-913 4502 chr3R 28484354 28484425 chr3R 28486239 28486292 130 1869 147.5 181.0 164.2 0.8 1938 chr3R 28484354 intergenic CG1894 + chr3R 28485323 exon CG1894 + chr3R 28486292 intergenic CG1894 + chr3R_130_28485001 chr3R_28485001 RAL-913 4503 chr3R 28531723 28531733 chr3R 28531841 28531871 6 128 22.5 19.5 21.0 0.3 148 chr3R 28531723 intron Ppn - chr3R 28531797 intron Ppn - chr3R 28531871 intron Ppn - chr3R_6_28530001 chr3R_28530001 RAL-913 4504 chr3R 28538767 28538807 chr3R 28538896 28538899 9 119 21.5 16.5 19.0 0.5 132 chr3R 28538767 intron Ppn - chr3R 28538833 intron Ppn - chr3R 28538899 intron Ppn - chr3R_9_28535001 chr3R_28535001 RAL-913 4505 chr3R 28538811 28538833 chr3R 28538885 28538962 6 115 20.0 18.0 19.0 0.3 151 chr3R 28538811 intron Ppn - chr3R 28538886 intron Ppn - chr3R 28538962 intron Ppn - chr3R_6_28535001 chr3R_28535001 RAL-913 4506 chr3R 28569257 28569290 chr3R 28569494 28569527 11 236 6.5 26.5 16.5 0.6 270 chr3R 28569257 intergenic not near genes chr3R 28569392 intergenic not near genes chr3R 28569527 intergenic not near genes chr3R_11_28565001 chr3R_28565001 RAL-913 4507 chr3R 28569299 28569315 chr3R 28569476 28569543 6 217 9.0 25.0 17.0 0.3 244 chr3R 28569299 intergenic not near genes chr3R 28569421 intergenic not near genes chr3R 28569543 intergenic not near genes chr3R_6_28565001 chr3R_28565001 RAL-913 4508 chr3R 28616431 28616500 chr3R 28616575 28616644 19 143 22.0 19.0 20.5 0.9 213 chr3R 28616431 intron CG10011 - chr3R 28616538 intron CG10011 - chr3R 28616644 intron CG10011 - chr3R_19_28615001 chr3R_28615001 RAL-913 4509 chr3R 28632896 28632940 chr3R 28632992 28633067 10 118 13.5 21.5 17.5 0.5 171 chr3R 28632896 intron CG10011 - chr3R 28632982 intron CG10011 - chr3R 28633067 intron CG10011 - chr3R_10_28630001 chr3R_28630001 RAL-913 4510 chr3R 28643277 28643306 chr3R 28643414 28643430 5 134 23.5 29.0 26.2 0.2 153 chr3R 28643277 intergenic CG14062 - chr3R 28643354 intergenic CG14062 - chr3R 28643430 intergenic not near genes chr3R_5_28640001 chr3R_28640001 RAL-913 4511 chr3R 28683768 28683834 chr3R 28685018 28685100 29 1252 60.5 64.5 62.5 0.5 1332 chr3R 28683768 intron CG9990 + chr3R 28684434 intron CG9990 + chr3R 28685100 intron CG9990 + chr3R_29_28680001 chr3R_28680001 RAL-913 4512 chr3R 28687047 28687115 chr3R 28687176 28687214 22 123 22.5 22.0 22.2 0.9 167 chr3R 28687047 intron CG9990 + chr3R 28687130 intron CG9990 + chr3R 28687214 intron CG9990 + chr3R_22_28685001 chr3R_28685001 RAL-913 4513 chr3R 28711704 28711763 chr3R 28711843 28711902 12 139 28.0 30.0 29.0 0.4 198 chr3R 28711704 intron htt + chr3R 28711803 intron htt + chr3R 28711902 intron htt + chr3R_12_28710001 chr3R_28710001 RAL-913 4514 chr3R 28728455 28728485 chr3R 28728623 28728654 9 169 22.0 15.0 18.5 0.5 199 chr3R 28728455 intron htt + chr3R 28728554 intron htt + chr3R 28728654 intron htt + chr3R_9_28725001 chr3R_28725001 RAL-913 4515 chr3R 28742454 28742510 chr3R 28742580 28742636 11 126 27.0 30.5 28.8 0.4 182 chr3R 28742454 intron AstA-R2 - chr3R 28742545 intron AstA-R2 - chr3R 28742636 intron AstA-R2 - chr3R_11_28740001 chr3R_28740001 RAL-913 4516 chr3R 28755536 28755554 chr3R 28755634 28755682 4 112 4.5 15.5 10.0 0.4 146 chr3R 28755536 3` UTR CG9997 - chr3R 28755609 3` UTR CG9997 - chr3R 28755682 3` UTR CG9997 - chr3R_4_28755001 chr3R_28755001 RAL-913 4517 chr3R 28758235 28758254 chr3R 28763902 28763921 roo 10 5667 21.5 0.0 10.8 0.8 5686 chr3R 28758235 intergenic aqrs - chr3R 28761078 intergenic not near genes chr3R 28763921 intergenic not near genes chr3R_10_28760001 chr3R_28760001 RAL-913 4518 chr3R 28758272 28758282 chr3R 28771329 28771339 Stalker4 4 13057 11.5 7.5 9.5 0.4 13067 chr3R 28758272 intergenic aqrs - chr3R 28764806 intergenic not near genes chr3R 28771339 intergenic not near genes chr3R_4_28760001 chr3R_28760001 RAL-913 4519 chr3R 28758285 28758317 chr3R 28771342 28771374 Stalker4 15 13057 5.5 10.0 7.8 1.7 13089 chr3R 28758285 intergenic aqrs - chr3R 28764830 intergenic not near genes chr3R 28771374 intergenic not near genes chr3R_15_28760001 chr3R_28760001 RAL-913 4520 chr3R 28787901 28787976 chr3R 28788061 28788136 8 158 19.0 20.0 19.5 0.4 235 chr3R 28787901 intergenic not near genes chr3R 28788018 intergenic not near genes chr3R 28788136 intergenic not near genes chr3R_8_28785001 chr3R_28785001 RAL-913 4521 chr3R 28792811 28792896 chr3R 28797967 28797996 jockey 20 5132 4.0 11.0 7.5 2.4 5185 chr3R 28792811 intergenic not near genes chr3R 28795404 intergenic not near genes chr3R 28797996 intergenic not near genes chr3R_20_28795001 chr3R_28795001 RAL-913 4522 chr3R 28811526 28811591 chr3R 28811722 28811787 26 196 12.0 6.5 9.2 2.5 261 chr3R 28811526 intergenic wdn - chr3R 28811656 intergenic wdn -,CG1646 + chr3R 28811787 intergenic CG1646 +,wdn - chr3R_26_28810001 chr3R_28810001 RAL-913 4523 chr3R 28830845 28830916 chr3R 28830973 28831044 31 128 14.0 10.0 12.0 2.4 199 chr3R 28830845 intron WASp - chr3R 28830944 intron WASp - chr3R 28831044 intron WASp - chr3R_31_28830001 chr3R_28830001 RAL-913 4524 chr3R 21907534 21907536 chr3R 28831799 28831802 56 6924266 37.5 21.0 29.2 1.9 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_56_25365001 chr3R_25365001 RAL-913 4525 chr3R 28882868 28882944 chr3R 28883035 28883109 11 166 22.5 20.5 21.5 0.5 241 chr3R 28882868 intron,exon CG33203 -,CG14527 + chr3R 28882988 intron CG33203 - chr3R 28883109 intron CG33203 - chr3R_11_28880001 chr3R_28880001 RAL-913 4526 chr3R 28936771 28936795 chr3R 28937071 28937075 9 298 11.5 19.0 15.2 0.6 304 chr3R 28936771 intron CG14521 - chr3R 28936923 intron CG14521 - chr3R 28937075 intron CG14521 - chr3R_9_28935001 chr3R_28935001 RAL-913 4527 chr3R 28938080 28938144 chr3R 28938218 28938282 10 138 15.5 19.5 17.5 0.5 202 chr3R 28938080 intron CG14521 - chr3R 28938181 intron CG14521 - chr3R 28938282 intron CG14521 - chr3R_10_28935001 chr3R_28935001 RAL-913 4528 chr3R 28941035 28941046 chr3R 28941160 28941173 7 127 15.5 9.5 12.5 0.5 138 chr3R 28941035 intron CG14521 - chr3R 28941104 intron CG14521 - chr3R 28941173 intron CG14521 - chr3R_7_28940001 chr3R_28940001 RAL-913 4529 chr3R 28945060 28945139 chr3R 28945228 28945316 14 172 19.5 17.5 18.5 0.7 256 chr3R 28945060 intron CG14521 - chr3R 28945188 intron CG14521 - chr3R 28945316 intron CG14521 - chr3R_14_28945001 chr3R_28945001 RAL-913 4530 chr3R 28947945 28947999 chr3R 28948107 28948161 8 162 37.0 39.0 38.0 0.2 216 chr3R 28947945 intron CG14521 - chr3R 28948053 intron CG14521 - chr3R 28948161 intron CG14521 - chr3R_8_28945001 chr3R_28945001 RAL-913 4531 chr3R 28971122 28971191 chr3R 28971253 28971323 20 131 27.0 23.0 25.0 0.8 201 chr3R 28971122 5` UTR CR45669 + chr3R 28971222 5` UTR CR45669 + chr3R 28971323 5` UTR CR45669 + chr3R_20_28970001 chr3R_28970001 RAL-913 4532 chr3R 28985017 28985091 chr3R 28985169 28985245 6 149 34.0 31.0 32.5 0.2 228 chr3R 28985017 intergenic not near genes chr3R 28985131 intergenic not near genes chr3R 28985245 intergenic not near genes chr3R_6_28985001 chr3R_28985001 RAL-913 4533 chr3R 28986777 28986811 chr3R 28986910 28986944 9 133 28.0 23.0 25.5 0.3 167 chr3R 28986777 intergenic not near genes chr3R 28986860 intergenic not near genes chr3R 28986944 intergenic not near genes chr3R_9_28985001 chr3R_28985001 RAL-913 4534 chr3R 28988949 28989019 chr3R 28989083 28989148 9 131 21.5 21.0 21.2 0.4 199 chr3R 28988949 intergenic not near genes chr3R 28989048 intergenic not near genes chr3R 28989148 intergenic not near genes chr3R_9_28985001 chr3R_28985001 RAL-913 4535 chr3R 28989854 28989918 chr3R 28990079 28990143 11 220 27.5 22.0 24.8 0.4 289 chr3R 28989854 intergenic not near genes chr3R 28989998 intergenic not near genes chr3R 28990143 intergenic not near genes chr3R_11_28985001 chr3R_28985001 RAL-913 4536 chr3R 29006845 29006869 chr3R 29006972 29006996 6 124 11.0 15.5 13.2 0.4 151 chr3R 29006845 intron wat - chr3R 29006920 intron wat - chr3R 29006996 intron wat - chr3R_6_29005001 chr3R_29005001 RAL-913 4537 chr3R 29017370 29017436 chr3R 29017501 29017539 9 128 19.0 15.0 17.0 0.5 169 chr3R 29017370 intron wat - chr3R 29017454 intron wat - chr3R 29017539 intron wat - chr3R_9_29015001 chr3R_29015001 RAL-913 4538 chr3R 29032699 29032776 chr3R 29032826 29032909 14 125 24.0 29.0 26.5 0.5 210 chr3R 29032699 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032804 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032909 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_14_29030001 chr3R_29030001 RAL-913 4539 chr3R 29079343 29079356 chr3R 29080765 29080778 NOF 4 1422 17.5 11.0 14.2 0.3 1435 chr3R 29079343 intron CG11873 + chr3R 29080060 intron CG11873 + chr3R 29080778 intron CG11873 + chr3R_4_29080001 chr3R_29080001 RAL-913 4540 chr3R 29079357 29079398 chr3R 29080757 29080813 NOF 16 1418 11.5 10.0 10.8 1.4 1456 chr3R 29079357 intron CG11873 + chr3R 29080085 intron CG11873 + chr3R 29080813 intron CG11873 + chr3R_16_29080001 chr3R_29080001 RAL-913 4541 chr3R 29081438 29081485 chr3R 29081577 29081623 9 138 7.5 6.5 7.0 1.1 185 chr3R 29081438 intron CG11873 + chr3R 29081530 intron CG11873 + chr3R 29081623 intron CG11873 + chr3R_9_29080001 chr3R_29080001 RAL-913 4542 chr3R 29090705 29090778 chr3R 29090872 29090945 18 166 14.5 19.0 16.8 1.0 240 chr3R 29090705 intron CG11873 + chr3R 29090825 intron CG11873 + chr3R 29090945 intron CG11873 + chr3R_18_29090001 chr3R_29090001 RAL-913 4543 chr3R 29091383 29091436 chr3R 29091521 29091559 18 134 8.0 8.0 8.0 2.0 176 chr3R 29091383 intron CG11873 + chr3R 29091471 intron CG11873 + chr3R 29091559 intron CG11873 + chr3R_18_29090001 chr3R_29090001 RAL-913 4544 chr3R 29096239 29096253 chr3R 29096374 29096388 4 135 22.0 25.0 23.5 0.2 149 chr3R 29096239 intron,5` UTR CG11873 +,CR45030 + chr3R 29096314 intron,5` UTR CG11873 +,CR45030 + chr3R 29096388 intron,5` UTR CG11873 +,CR45030 + chr3R_4_29095001 chr3R_29095001 RAL-913 4545 chr3R 29168442 29168505 chr3R 29168580 29168593 27 136 19.0 16.5 17.8 1.4 151 chr3R 29168442 intron CG11898 + chr3R 29168518 intron CG11898 + chr3R 29168593 intron CG11898 + chr3R_27_29165001 chr3R_29165001 RAL-913 4546 chr3R 29186991 29187035 chr3R 29187119 29187163 10 128 37.0 27.0 32.0 0.3 172 chr3R 29186991 intron CG14509 - chr3R 29187077 intron CG14509 - chr3R 29187163 intron CG14509 - chr3R_10_29185001 chr3R_29185001 RAL-913 4547 chr3R 29211163 29211199 chr3R 29211330 29211353 9 165 20.0 22.5 21.2 0.4 190 chr3R 29211163 intergenic not near genes chr3R 29211258 intergenic not near genes chr3R 29211353 intergenic not near genes chr3R_9_29210001 chr3R_29210001 RAL-913 4548 chr3R 29213019 29213089 chr3R 29213152 29213222 26 133 10.5 9.5 10.0 2.4 203 chr3R 29213019 intergenic not near genes chr3R 29213120 intergenic not near genes chr3R 29213222 intergenic not near genes chr3R_26_29210001 chr3R_29210001 RAL-913 4549 chr3R 29237226 29237252 chr3R 29239297 29239323 6 2070 45.5 16.0 30.8 0.2 2097 chr3R 29237226 exon CG11951 - chr3R 29238274 intron CG11951 - chr3R 29239323 exon CG31427 - chr3R_6_29235001 chr3R_29235001 RAL-913 4550 chr3R 29237255 29237540 chr3R 29239269 29239483 12 2011 31.5 9.0 20.2 0.6 2228 chr3R 29237255 exon CG11951 - chr3R 29238369 intron CG11951 - chr3R 29239483 exon CG31427 - chr3R_12_29235001 chr3R_29235001 RAL-913 4551 chr3R 29238726 29238782 chr3R 29238890 29238946 17 164 17.5 20.5 19.0 0.8 220 chr3R 29238726 intergenic CG11951 -,CG31427 - chr3R 29238836 3` UTR CG31427 - chr3R 29238946 3` UTR CG31427 - chr3R_17_29235001 chr3R_29235001 RAL-913 4552 chr3R 29239203 29239239 chr3R 29245529 29245580 16 6329 8.5 36.0 22.2 0.7 6377 chr3R 29239203 exon CG31427 - chr3R 29242392 exon CG31445 - chr3R 29245580 exon SP1029 - chr3R_16_29240001 chr3R_29240001 RAL-913 4553 chr3R 29237524 29237535 chr3R 29239382 29239393 8 1858 32.0 18.0 25.0 0.3 1869 chr3R 29237524 exon CG11951 - chr3R 29238458 intron CG11951 - chr3R 29239393 intron CG31427 - chr3R_8_29235001 chr3R_29235001 RAL-913 4554 chr3R 29240423 29240502 chr3R 29240554 29240636 11 133 17.5 18.0 17.8 0.6 213 chr3R 29240423 intergenic CG31427 -,CG31445 - chr3R 29240530 intergenic CG31445 -,CG31427 - chr3R 29240636 3` UTR CG31445 - chr3R_11_29240001 chr3R_29240001 RAL-913 4555 chr3R 29249858 29249904 chr3R 29249997 29250043 7 139 0.0 3.0 1.5 2.8 185 chr3R 29249858 intron SP1029 - chr3R 29249950 intron SP1029 - chr3R 29250043 intron SP1029 - chr3R_7_29245001 chr3R_29245001 RAL-913 4556 chr3R 29256221 29256294 chr3R 29256351 29256424 13 123 20.5 16.0 18.2 0.7 203 chr3R 29256221 intergenic CG45544 +,stg - chr3R 29256322 intergenic CG45544 + chr3R 29256424 intergenic CG45544 + chr3R_13_29255001 chr3R_29255001 RAL-913 4557 chr3R 29319785 29319848 chr3R 29320154 29320217 jockey 20 369 12.5 8.5 10.5 1.7 432 chr3R 29319785 intergenic Cnx99A - chr3R 29320001 intergenic Cnx99A - chr3R 29320217 intergenic not near genes chr3R_20_29320001 chr3R_29320001 RAL-913 4558 chr3R 29322768 29322829 chr3R 29322896 29322956 10 124 4.5 3.5 4.0 2.0 188 chr3R 29322768 intergenic not near genes chr3R 29322862 intergenic not near genes chr3R 29322956 intergenic not near genes chr3R_10_29320001 chr3R_29320001 RAL-913 4559 chr3R 29334184 29334235 chr3R 29334311 29334327 9 119 14.5 19.5 17.0 0.5 143 chr3R 29334184 intergenic not near genes chr3R 29334256 intergenic not near genes chr3R 29334327 intergenic not near genes chr3R_9_29330001 chr3R_29330001 RAL-913 4560 chr3R 29335351 29335412 chr3R 29335543 29335604 16 188 10.5 18.0 14.2 1.1 253 chr3R 29335351 intergenic not near genes chr3R 29335478 intergenic not near genes chr3R 29335604 intergenic not near genes chr3R_16_29335001 chr3R_29335001 RAL-913 4561 chr3R 29344066 29344137 chr3R 29344304 29344357 9 233 11.5 23.5 17.5 0.5 291 chr3R 29344066 intergenic not near genes chr3R 29344212 intergenic not near genes chr3R 29344357 intergenic not near genes chr3R_9_29340001 chr3R_29340001 RAL-913 4562 chr3R 29351741 29351753 chr3R 29351858 29351888 5 129 17.0 25.5 21.2 0.2 147 chr3R 29351741 intergenic not near genes chr3R 29351814 intergenic not near genes chr3R 29351888 intergenic not near genes chr3R_5_29350001 chr3R_29350001 RAL-913 4563 chr3R 29355929 29355984 chr3R 29356059 29356114 17 129 10.0 8.0 9.0 1.7 185 chr3R 29355929 intergenic CR45547 - chr3R 29356022 intergenic CR45547 - chr3R 29356114 intergenic CR45547 - chr3R_17_29355001 chr3R_29355001 RAL-913 4564 chr3R 29376311 29376352 chr3R 29376449 29376490 6 138 20.5 22.0 21.2 0.3 179 chr3R 29376311 intergenic not near genes chr3R 29376400 intergenic not near genes chr3R 29376490 intergenic not near genes chr3R_6_29375001 chr3R_29375001 RAL-913 4565 chr3R 29383710 29383745 chr3R 29383853 29383888 8 142 17.5 16.0 16.8 0.4 178 chr3R 29383710 intron Ptp99A + chr3R 29383799 intron Ptp99A + chr3R 29383888 intron Ptp99A + chr3R_8_29380001 chr3R_29380001 RAL-913 4566 chr3R 29402931 29403006 chr3R 29403075 29403154 6 144 26.0 24.5 25.2 0.2 223 chr3R 29402931 intron Ptp99A + chr3R 29403042 intron Ptp99A + chr3R 29403154 intron Ptp99A + chr3R_6_29400001 chr3R_29400001 RAL-913 4567 chr3R 29406574 29406639 chr3R 29407909 29407975 jockey 14 1328 8.5 12.5 10.5 1.2 1401 chr3R 29406574 intron Ptp99A + chr3R 29407274 intron Ptp99A + chr3R 29407975 intron Ptp99A + chr3R_14_29405001 chr3R_29405001 RAL-913 4568 chr3R 29429746 29429804 chr3R 29429869 29429932 18 123 4.5 7.5 6.0 2.6 186 chr3R 29429746 intron Ptp99A + chr3R 29429839 intron Ptp99A + chr3R 29429932 intron Ptp99A + chr3R_18_29425001 chr3R_29425001 RAL-913 4569 chr3R 29430334 29430403 chr3R 29430490 29430559 18 155 29.0 21.0 25.0 0.7 225 chr3R 29430334 intron Ptp99A + chr3R 29430446 intron Ptp99A + chr3R 29430559 intron Ptp99A + chr3R_18_29430001 chr3R_29430001 RAL-913 4570 chr3R 29447135 29447167 chr3R 29447245 29447294 8 123 18.0 9.5 13.8 0.5 159 chr3R 29447135 intron Ptp99A + chr3R 29447214 intron Ptp99A + chr3R 29447294 intron Ptp99A + chr3R_8_29445001 chr3R_29445001 RAL-913 4571 chr3R 29447787 29447846 chr3R 29447944 29448003 15 153 16.5 18.5 17.5 0.8 216 chr3R 29447787 intron Ptp99A + chr3R 29447895 intron Ptp99A + chr3R 29448003 intron Ptp99A + chr3R_15_29445001 chr3R_29445001 RAL-913 4572 chr3R 29453685 29453775 chr3R 29453828 29453866 4 126 8.0 15.5 11.8 0.3 181 chr3R 29453685 intron Ptp99A + chr3R 29453776 intron Ptp99A + chr3R 29453866 intron Ptp99A + chr3R_4_29450001 chr3R_29450001 RAL-913 4573 chr3R 29471967 29472030 chr3R 29472101 29472171 20 138 7.5 9.5 8.5 2.1 204 chr3R 29471967 intron Ptp99A + chr3R 29472069 intron Ptp99A + chr3R 29472171 intron Ptp99A + chr3R_20_29470001 chr3R_29470001 RAL-913 4574 chr3R 29474382 29474447 chr3R 29474519 29474584 39 137 17.5 14.5 16.0 2.3 202 chr3R 29474382 intron Ptp99A + chr3R 29474483 intron Ptp99A + chr3R 29474584 intron Ptp99A + chr3R_39_29470001 chr3R_29470001 RAL-913 4575 chr3R 29505843 29505921 chr3R 29505969 29506048 13 127 24.0 21.5 22.8 0.5 205 chr3R 29505843 intergenic not near genes chr3R 29505946 intergenic not near genes chr3R 29506048 intergenic not near genes chr3R_13_29505001 chr3R_29505001 RAL-913 4576 chr3R 29539381 29539417 chr3R 29539507 29539526 19 124 14.5 1.0 7.8 2.2 145 chr3R 29539381 intergenic not near genes chr3R 29539454 intergenic not near genes chr3R 29539526 intergenic not near genes chr3R_19_29535001 chr3R_29535001 RAL-913 4577 chr3R 29546728 29546784 chr3R 29546843 29546910 12 121 25.0 23.5 24.2 0.5 182 chr3R 29546728 intergenic not near genes chr3R 29546819 intergenic not near genes chr3R 29546910 intergenic not near genes chr3R_12_29545001 chr3R_29545001 RAL-913 4578 chr3R 29563977 29563997 chr3R 29564103 29564123 9 126 1.0 13.5 7.2 1.1 146 chr3R 29563977 intron Dr + chr3R 29564050 intron Dr + chr3R 29564123 intron Dr + chr3R_9_29560001 chr3R_29560001 RAL-913 4579 chr3R 29576206 29576262 chr3R 29576346 29576392 6 138 17.0 25.5 21.2 0.3 186 chr3R 29576206 intergenic not near genes chr3R 29576299 intergenic not near genes chr3R 29576392 intergenic not near genes chr3R_6_29575001 chr3R_29575001 RAL-913 4580 chr3R 29576751 29577003 chr3R 29576895 29577134 11 135 24.0 28.0 26.0 0.4 383 chr3R 29576751 intergenic not near genes chr3R 29576942 intergenic not near genes chr3R 29577134 intergenic not near genes chr3R_11_29575001 chr3R_29575001 RAL-913 4581 chr3R 29581503 29581557 chr3R 29581634 29581688 14 131 26.0 25.0 25.5 0.5 185 chr3R 29581503 intergenic not near genes chr3R 29581596 intergenic not near genes chr3R 29581688 intergenic not near genes chr3R_14_29580001 chr3R_29580001 RAL-913 4582 chr3R 29606898 29606968 chr3R 29607026 29607096 13 128 23.0 24.0 23.5 0.5 198 chr3R 29606898 intron alph + chr3R 29606997 intron alph + chr3R 29607096 intron alph + chr3R_13_29605001 chr3R_29605001 RAL-913 4583 chr3R 29621225 29621260 chr3R 29621352 29621387 9 126 24.5 20.5 22.5 0.4 162 chr3R 29621225 intergenic CG1907 + chr3R 29621306 intergenic not near genes chr3R 29621387 intergenic not near genes chr3R_9_29620001 chr3R_29620001 RAL-913 4584 chr3R 29624920 29624960 chr3R 29625046 29625081 5 121 23.5 20.5 22.0 0.2 161 chr3R 29624920 intergenic not near genes chr3R 29625000 intergenic not near genes chr3R 29625081 intergenic not near genes chr3R_5_29625001 chr3R_29625001 RAL-913 4585 chr3R 29627234 29627314 chr3R 29627696 29627776 7 462 24.5 4.5 14.5 0.5 542 chr3R 29627234 intergenic not near genes chr3R 29627505 intergenic not near genes chr3R 29627776 intergenic not near genes chr3R_7_29625001 chr3R_29625001 RAL-913 4586 chr3R 29631476 29631554 chr3R 29631614 29631686 15 133 15.0 21.0 18.0 0.8 210 chr3R 29631476 3` UTR Dop1R2 - chr3R 29631581 3` UTR Dop1R2 - chr3R 29631686 3` UTR Dop1R2 - chr3R_15_29630001 chr3R_29630001 RAL-913 4587 chr3R 29642465 29642534 chr3R 29642592 29642661 14 127 14.0 19.0 16.5 0.8 196 chr3R 29642465 intron Dop1R2 - chr3R 29642563 intron Dop1R2 - chr3R 29642661 intron Dop1R2 - chr3R_14_29640001 chr3R_29640001 RAL-913 4588 chr3R 29645781 29645854 chr3R 29645912 29645955 13 128 25.5 26.0 25.8 0.5 174 chr3R 29645781 intron Dop1R2 - chr3R 29645868 intron Dop1R2 - chr3R 29645955 intron Dop1R2 - chr3R_13_29645001 chr3R_29645001 RAL-913 4589 chr3R 29738223 29738285 chr3R 29739740 29739802 hobo 36 1516 15.0 7.5 11.2 3.0 1579 chr3R 29738223 intergenic CG1969 +,CG7598 + chr3R 29739012 intron CG1969 + chr3R 29739802 5` UTR CG1969 + chr3R_36_29735001 chr3R_29735001 RAL-913 4590 chr3R 29754916 29754983 chr3R 29755044 29755110 6 128 14.0 18.5 16.2 0.3 194 chr3R 29754916 intergenic CR44953 -,yata + chr3R 29755013 intergenic CR44953 -,yata + chr3R 29755110 intergenic CR44953 - chr3R_6_29755001 chr3R_29755001 RAL-913 4591 chr3R 29758896 29758963 chr3R 29759024 29759091 25 127 19.0 19.5 19.2 1.2 195 chr3R 29758896 3` UTR CR44953 - chr3R 29758994 3` UTR CR44953 - chr3R 29759091 intergenic CR44953 - chr3R_25_29755001 chr3R_29755001 RAL-913 4592 chr3R 29760323 29760380 chr3R 29761574 29761631 pogo 17 1251 29.0 21.5 25.2 0.6 1308 chr3R 29760323 intergenic not near genes chr3R 29760977 intergenic not near genes chr3R 29761631 intergenic not near genes chr3R_17_29760001 chr3R_29760001 RAL-913 4593 chr3R 29831766 29831807 chr3R 29831898 29831941 8 129 29.5 22.5 26.0 0.3 175 chr3R 29831766 exon Atg16 - chr3R 29831854 intron Atg16 - chr3R 29831941 exon Atg16 - chr3R_8_29830001 chr3R_29830001 RAL-913 4594 chr3R 29854784 29854852 chr3R 29854914 29854982 8 126 28.5 28.5 28.5 0.3 198 chr3R 29854784 3` UTR dgt1 - chr3R 29854883 exon dgt1 - chr3R 29854982 exon dgt1 - chr3R_8_29850001 chr3R_29850001 RAL-913 4595 chr3R 29880958 29881031 chr3R 29881094 29881167 34 134 10.0 11.0 10.5 3.0 209 chr3R 29880958 intron CG31038 + chr3R 29881062 intron CG31038 + chr3R 29881167 intron CG31038 + chr3R_34_29880001 chr3R_29880001 RAL-913 4596 chr3R 29881977 29882049 chr3R 29891184 29891231 roo 28 9206 9.0 10.0 9.5 2.7 9254 chr3R 29881977 intron CG31038 + chr3R 29886604 intron CG31038 + chr3R 29891231 intron CG31038 + chr3R_28_29885001 chr3R_29885001 RAL-913 4597 chr3R 29893755 29893812 chr3R 29895690 29895740 12 1930 33.5 48.5 41.0 0.3 1985 chr3R 29893755 intron CG31038 + chr3R 29894748 intron CG31038 + chr3R 29895740 intron CG31038 + chr3R_12_29890001 chr3R_29890001 RAL-913 4598 chr3R 29950526 29950595 chr3R 29950653 29950667 20 121 6.0 9.0 7.5 2.4 141 chr3R 29950526 intergenic TkR99D - chr3R 29950596 intergenic TkR99D - chr3R 29950667 intergenic TkR99D - chr3R_20_29950001 chr3R_29950001 RAL-913 4599 chr3R 29953407 29953470 chr3R 29953538 29953540 6 119 25.0 16.5 20.8 0.3 133 chr3R 29953407 exon TkR99D - chr3R 29953474 exon TkR99D - chr3R 29953540 intron TkR99D - chr3R_6_29950001 chr3R_29950001 RAL-913 4600 chr3R 29963430 29963489 chr3R 29963578 29963641 10 147 14.0 12.0 13.0 0.7 211 chr3R 29963430 intron TkR99D - chr3R 29963536 intron TkR99D - chr3R 29963641 intron TkR99D - chr3R_10_29960001 chr3R_29960001 RAL-913 4601 chr3R 29966025 29966063 chr3R 29966155 29966190 8 126 21.0 25.5 23.2 0.3 165 chr3R 29966025 intron TkR99D - chr3R 29966108 intron TkR99D - chr3R 29966190 intron TkR99D - chr3R_8_29965001 chr3R_29965001 RAL-913 4602 chr3R 29976507 29976539 chr3R 29976769 29976785 7 259 18.5 21.5 20.0 0.3 278 chr3R 29976507 intergenic not near genes chr3R 29976646 intergenic not near genes chr3R 29976785 intergenic not near genes chr3R_7_29975001 chr3R_29975001 RAL-913 4603 chr3R 29980769 29980833 chr3R 29980897 29980961 8 128 22.0 21.5 21.8 0.4 192 chr3R 29980769 intergenic not near genes chr3R 29980865 intergenic not near genes chr3R 29980961 intergenic not near genes chr3R_8_29980001 chr3R_29980001 RAL-913 4604 chr3R 30032118 30032125 chr3R 30032246 30032254 4 129 17.0 16.0 16.5 0.2 136 chr3R 30032118 intron Axn + chr3R 30032186 intron Axn + chr3R 30032254 intron Axn + chr3R_4_30030001 chr3R_30030001 RAL-913 4605 chr3R 30075525 30075583 chr3R 30075664 30075722 11 139 22.5 17.0 19.8 0.5 197 chr3R 30075525 intron sima + chr3R 30075624 intron sima + chr3R 30075722 intron sima + chr3R_11_30075001 chr3R_30075001 RAL-913 4606 chr3R 30080420 30080456 chr3R 30080549 30080585 13 128 15.5 14.5 15.0 0.8 165 chr3R 30080420 intron sima + chr3R 30080502 intron sima + chr3R 30080585 intron sima + chr3R_13_30080001 chr3R_30080001 RAL-913 4607 chr3R 30082944 30083015 chr3R 30083065 30083141 13 124 24.0 21.0 22.5 0.6 197 chr3R 30082944 intron sima + chr3R 30083042 intron sima + chr3R 30083141 intron sima + chr3R_13_30080001 chr3R_30080001 RAL-913 4608 chr3R 30084815 30084879 chr3R 30086333 30086339 hobo 13 1511 2.5 10.5 6.5 1.7 1524 chr3R 30084815 intron sima + chr3R 30085577 intron sima + chr3R 30086339 intron sima + chr3R_13_30085001 chr3R_30085001 RAL-913 4609 chr3R 30099031 30099078 chr3R 30099150 30099208 8 128 25.0 24.5 24.8 0.3 177 chr3R 30099031 intron sima + chr3R 30099120 intron sima + chr3R 30099208 intron sima + chr3R_8_30095001 chr3R_30095001 RAL-913 4610 chr3R 30175654 30175725 chr3R 30175790 30175861 18 136 26.5 26.5 26.5 0.7 207 chr3R 30175654 intergenic CG1983 - chr3R 30175758 intergenic CG1983 - chr3R 30175861 3` UTR CG1983 - chr3R_18_30175001 chr3R_30175001 RAL-913 4611 chr3R 30210519 30210674 chr3R 30210665 30210804 7 142 22.5 22.5 22.5 0.3 285 chr3R 30210519 intergenic Anp +,CecA1 + chr3R 30210662 intergenic CecA1 +,Anp + chr3R 30210804 intergenic CecA1 +,Anp + chr3R_7_30210001 chr3R_30210001 RAL-913 4612 chr3R 30219814 30219841 chr3R 30219953 30219980 11 139 29.5 18.0 23.8 0.4 166 chr3R 30219814 intergenic not near genes chr3R 30219897 intergenic not near genes chr3R 30219980 intergenic not near genes chr3R_11_30215001 chr3R_30215001 RAL-913 4613 chr3R 30238719 30238785 chr3R 30239933 30239999 1360 35 1211 7.5 11.5 9.5 3.3 1280 chr3R 30238719 intergenic not near genes chr3R 30239359 intergenic not near genes chr3R 30239999 intergenic not near genes chr3R_35_30235001 chr3R_30235001 RAL-913 4614 chr3R 30246293 30246335 chr3R 30246422 30246464 7 129 4.0 16.5 10.2 0.6 171 chr3R 30246293 intron CG9733 - chr3R 30246378 intron CG9733 - chr3R 30246464 intron CG9733 - chr3R_7_30245001 chr3R_30245001 RAL-913 4615 chr3R 30268194 30268440 chr3R 30268323 30268524 40 125 19.5 6.0 12.8 2.9 330 chr3R 30268194 intergenic not near genes chr3R 30268359 intergenic not near genes chr3R 30268524 intergenic not near genes chr3R_40_30265001 chr3R_30265001 RAL-913 4616 chr3R 30307074 30307119 chr3R 30307205 30307236 6 129 16.5 14.5 15.5 0.4 162 chr3R 30307074 intron hdc + chr3R 30307155 intron hdc + chr3R 30307236 intron hdc + chr3R_6_30305001 chr3R_30305001 RAL-913 4617 chr3R 30307123 30307143 chr3R 30307202 30307274 9 119 14.5 14.0 14.2 0.6 151 chr3R 30307123 intron hdc + chr3R 30307198 intron hdc + chr3R 30307274 intron hdc + chr3R_9_30305001 chr3R_30305001 RAL-913 4618 chr3R 30315590 30315617 chr3R 30315723 30315750 4 126 22.0 17.0 19.5 0.2 160 chr3R 30315590 intron hdc + chr3R 30315670 intron hdc + chr3R 30315750 intron hdc + chr3R_4_30315001 chr3R_30315001 RAL-913 4619 chr3R 30317275 30317345 chr3R 30324918 30324987 roo 26 7640 6.0 7.5 6.8 3.3 7712 chr3R 30317275 intron hdc + chr3R 30321131 intron hdc + chr3R 30324987 intron hdc + chr3R_26_30320001 chr3R_30320001 RAL-913 4620 chr3R 30330454 30330513 chr3R 30330583 30330623 15 123 20.0 22.0 21.0 0.7 169 chr3R 30330454 intron hdc + chr3R 30330538 intron hdc + chr3R 30330623 intron hdc + chr3R_15_30330001 chr3R_30330001 RAL-913 4621 chr3R 30331984 30332059 chr3R 30332113 30332174 15 124 24.0 16.5 20.2 0.7 190 chr3R 30331984 intron hdc + chr3R 30332079 intron hdc + chr3R 30332174 intron hdc + chr3R_15_30330001 chr3R_30330001 RAL-913 4622 chr3R 30338360 30338386 chr3R 30338492 30338518 7 131 24.5 23.0 23.8 0.3 158 chr3R 30338360 intron hdc + chr3R 30338439 intron hdc + chr3R 30338518 intron hdc + chr3R_7_30335001 chr3R_30335001 RAL-913 4623 chr3R 30347017 30347033 chr3R 30347119 30347143 6 122 17.0 18.5 17.8 0.3 126 chr3R 30347017 intron hdc + chr3R 30347080 intron hdc + chr3R 30347143 intron hdc + chr3R_6_30345001 chr3R_30345001 RAL-913 4624 chr3R 30359312 30359327 chr3R 30359494 30359509 4 179 10.0 21.0 15.5 0.2 197 chr3R 30359312 intron hdc + chr3R 30359410 intron hdc + chr3R 30359509 intron hdc + chr3R_4_30355001 chr3R_30355001 RAL-913 4625 chr3R 30359349 30359384 chr3R 30359488 30359566 6 175 16.0 20.5 18.2 0.3 217 chr3R 30359349 intron hdc + chr3R 30359458 intron hdc + chr3R 30359566 intron hdc + chr3R_6_30355001 chr3R_30355001 RAL-913 4626 chr3R 30375498 30375562 chr3R 30383173 30383237 412 22 7675 13.5 11.5 12.5 1.6 7739 chr3R 30375498 intergenic not near genes chr3R 30379368 intergenic not near genes chr3R 30383237 intergenic not near genes chr3R_22_30375001 chr3R_30375001 RAL-913 4627 chr3R 30396175 30396241 chr3R 30404491 30404557 roo 32 8315 11.0 8.5 9.8 3.0 8382 chr3R 30396175 intergenic not near genes chr3R 30400366 intergenic not near genes chr3R 30404557 5` UTR CR45570 + chr3R_32_30400001 chr3R_30400001 RAL-913 4628 chr3R 30413031 30413088 chr3R 30413157 30413214 6 126 25.0 24.0 24.5 0.2 183 chr3R 30413031 intergenic not near genes chr3R 30413122 intergenic not near genes chr3R 30413214 intergenic not near genes chr3R_6_30410001 chr3R_30410001 RAL-913 4629 chr3R 30431273 30431301 chr3R 30431417 30431445 5 142 27.0 12.0 19.5 0.2 172 chr3R 30431273 3` UTR CG15533 + chr3R 30431359 3` UTR CG15533 + chr3R 30431445 intergenic CG15533 + chr3R_5_30430001 chr3R_30430001 RAL-913 4630 chr3R 30456348 30456418 chr3R 30456478 30456548 27 130 22.0 21.5 21.8 1.2 200 chr3R 30456348 intergenic CG2224 -,aralar1 - chr3R 30456448 3` UTR CG2224 - chr3R 30456548 3` UTR CG2224 - chr3R_27_30455001 chr3R_30455001 RAL-913 4631 chr3R 30457971 30458038 chr3R 30458101 30458168 17 130 17.5 25.5 21.5 0.8 197 chr3R 30457971 intron CG2224 - chr3R 30458070 intron CG2224 - chr3R 30458168 intron CG2224 - chr3R_17_30455001 chr3R_30455001 RAL-913 4632 chr3R 30461449 30461518 chr3R 30461616 30461685 11 164 23.5 20.5 22.0 0.5 236 chr3R 30461449 intron CDase + chr3R 30461567 intron CDase + chr3R 30461685 intron CDase + chr3R_11_30460001 chr3R_30460001 RAL-913 4633 chr3R 30480432 30480459 chr3R 30482950 30482967 jockey 7 2514 13.5 4.5 9.0 0.7 2535 chr3R 30480432 intron PH4alphaEFB + chr3R 30481700 intron PH4alphaEFB + chr3R 30482967 intron PH4alphaEFB + chr3R_7_30480001 chr3R_30480001 RAL-913 4634 chr3R 30480462 30480509 chr3R 30482947 30483003 jockey 22 2515 6.5 4.0 5.2 3.5 2541 chr3R 30480462 intron PH4alphaEFB + chr3R 30481732 intron PH4alphaEFB + chr3R 30483003 intron PH4alphaEFB + chr3R_22_30480001 chr3R_30480001 RAL-913 4635 chr3R 30485008 30485066 chr3R 30485134 30485192 17 125 18.5 20.5 19.5 0.8 184 chr3R 30485008 intron PH4alphaEFB + chr3R 30485100 intron PH4alphaEFB + chr3R 30485192 intron PH4alphaEFB + chr3R_17_30485001 chr3R_30485001 RAL-913 4636 chr3R 30488074 30488092 chr3R 30488203 30488221 8 129 25.0 16.5 20.8 0.4 147 chr3R 30488074 intergenic Jon99Fii - chr3R 30488148 intergenic Jon99Fii - chr3R 30488221 intergenic Jon99Fii - chr3R_8_30485001 chr3R_30485001 RAL-913 4637 chr3R 30528243 30528315 chr3R 30528461 30528533 15 218 18.0 20.5 19.2 0.7 290 chr3R 30528243 intergenic CR45552 - chr3R 30528388 3` UTR CR45552 - chr3R 30528533 intron CR45552 - chr3R_15_30525001 chr3R_30525001 RAL-913 4638 chr3R 30548271 30548320 chr3R 30548399 30548448 11 128 13.5 17.0 15.2 0.7 177 chr3R 30548271 intron tmod + chr3R 30548360 intron tmod + chr3R 30548448 intron tmod + chr3R_11_30545001 chr3R_30545001 RAL-913 4639 chr3R 30554375 30554423 chr3R 30554501 30554549 19 125 20.5 24.5 22.5 0.8 174 chr3R 30554375 intron tmod + chr3R 30554462 intron tmod + chr3R 30554549 intron tmod + chr3R_19_30550001 chr3R_30550001 RAL-913 4640 chr3R 30558099 30558151 chr3R 30558230 30558282 16 131 22.5 21.0 21.8 0.7 183 chr3R 30558099 intron,intron tmod +,CG34155 - chr3R 30558190 intron,intron tmod +,CG34155 - chr3R 30558282 intron,intron tmod +,CG34155 - chr3R_16_30555001 chr3R_30555001 RAL-913 4641 chr3R 30564286 30564340 chr3R 30564413 30564467 10 128 19.5 22.0 20.8 0.5 181 chr3R 30564286 intron tmod + chr3R 30564376 intron tmod + chr3R 30564467 intron tmod + chr3R_10_30560001 chr3R_30560001 RAL-913 4642 chr3R 30583188 30583232 chr3R 30583798 30583842 11 610 32.0 50.5 41.2 0.3 654 chr3R 30583188 exon Rpt6R - chr3R 30583515 exon Rpt6R - chr3R 30583842 intergenic Rpt6R -,CG9717 - chr3R_11_30580001 chr3R_30580001 RAL-913 4643 chr3R 30627562 30627629 chr3R 30627692 30627759 25 127 6.5 10.5 8.5 2.6 197 chr3R 30627562 3` UTR CG2267 - chr3R 30627660 exon CG2267 - chr3R 30627759 exon CG2267 - chr3R_25_30625001 chr3R_30625001 RAL-913 4644 chr3R 30650781 30650811 chr3R 30650928 30650958 11 145 2.5 9.5 6.0 1.6 177 chr3R 30650781 3` UTR CG34433 + chr3R 30650870 intergenic CG34433 + chr3R 30650958 intergenic CG34433 + chr3R_11_30650001 chr3R_30650001 RAL-913 4645 chr3R 30679478 30679549 chr3R 30686997 30687068 blood 28 7514 7.0 9.0 8.0 3.1 7590 chr3R 30679478 intergenic not near genes chr3R 30683273 intergenic not near genes chr3R 30687068 intergenic not near genes chr3R_28_30680001 chr3R_30680001 RAL-913 4646 chr3R 30690112 30690168 chr3R 30690246 30690300 11 133 12.5 7.5 10.0 1.0 188 chr3R 30690112 intergenic not near genes chr3R 30690206 intergenic Spn100A + chr3R 30690300 intergenic Spn100A + chr3R_11_30690001 chr3R_30690001 RAL-913 4647 chr3R 30700835 30700850 chr3R 30701008 30701023 6 173 14.5 14.5 14.5 0.4 188 chr3R 30700835 intergenic not near genes chr3R 30700929 intergenic not near genes chr3R 30701023 intergenic not near genes chr3R_6_30700001 chr3R_30700001 RAL-913 4648 chr3R 30737916 30737969 chr3R 30738060 30738113 11 138 29.5 28.5 29.0 0.4 197 chr3R 30737916 intergenic not near genes chr3R 30738014 intergenic not near genes chr3R 30738113 intergenic not near genes chr3R_11_30735001 chr3R_30735001 RAL-913 4649 chr3R 30761305 30761333 chr3R 30761437 30761465 12 132 21.5 19.5 20.5 0.6 160 chr3R 30761305 intergenic not near genes chr3R 30761385 intergenic not near genes chr3R 30761465 intergenic not near genes chr3R_12_30760001 chr3R_30760001 RAL-913 4650 chr3R 30818771 30818837 chr3R 30820386 30820452 1360 22 1614 11.5 12.0 11.8 1.7 1681 chr3R 30818771 intron cindr + chr3R 30819612 intron cindr + chr3R 30820452 intron cindr + chr3R_22_30815001 chr3R_30815001 RAL-913 4651 chr3R 30831669 30831696 chr3R 30831795 30831822 17 126 12.0 19.5 15.8 1.0 153 chr3R 30831669 intron CG15544 + chr3R 30831746 intron CG15544 + chr3R 30831822 intron CG15544 + chr3R_17_30830001 chr3R_30830001 RAL-913 4652 chr3R 30850190 30850266 chr3R 30850332 30850408 25 142 12.0 6.0 9.0 2.5 218 chr3R 30850190 intergenic not near genes chr3R 30850299 intergenic not near genes chr3R 30850408 intergenic not near genes chr3R_25_30850001 chr3R_30850001 RAL-913 4653 chr3R 30855753 30855786 chr3R 30855891 30855924 8 137 13.0 10.5 11.8 0.6 171 chr3R 30855753 intergenic not near genes chr3R 30855838 intergenic not near genes chr3R 30855924 intergenic not near genes chr3R_8_30855001 chr3R_30855001 RAL-913 4654 chr3R 30876853 30876881 chr3R 30876979 30877007 11 126 19.5 19.5 19.5 0.5 154 chr3R 30876853 intergenic CG12071 - chr3R 30876930 intergenic CG12071 - chr3R 30877007 intergenic CG12071 - chr3R_11_30875001 chr3R_30875001 RAL-913 4655 chr3R 30888923 30888994 chr3R 30893400 30893471 21 4477 43.0 54.0 48.5 0.4 4548 chr3R 30888923 exon Sap-r - chr3R 30891197 intergenic not near genes chr3R 30893471 intergenic not near genes chr3R_21_30890001 chr3R_30890001 RAL-913 4656 chr3R 30900485 30900549 chr3R 30900615 30900676 9 129 25.5 28.5 27.0 0.3 191 chr3R 30900485 exon Cyp4c3 + chr3R 30900580 3` UTR Cyp4c3 + chr3R 30900676 3` UTR Cyp4c3 + chr3R_9_30900001 chr3R_30900001 RAL-913 4657 chr3R 30927775 30927783 chr3R 30927908 30927915 4 133 18.5 8.0 13.2 0.3 140 chr3R 30927775 intron Ptx1 + chr3R 30927845 intron Ptx1 + chr3R 30927915 intron Ptx1 + chr3R_4_30925001 chr3R_30925001 RAL-913 4658 chr3R 30948030 30948051 chr3R 30948271 30948292 8 239 23.0 23.0 23.0 0.3 262 chr3R 30948030 intergenic not near genes chr3R 30948161 intergenic not near genes chr3R 30948292 intergenic not near genes chr3R_8_30945001 chr3R_30945001 RAL-913 4659 chr3R 30948055 30948102 chr3R 30948268 30948337 13 235 17.5 22.5 20.0 0.6 282 chr3R 30948055 intergenic not near genes chr3R 30948196 intergenic not near genes chr3R 30948337 intergenic not near genes chr3R_13_30945001 chr3R_30945001 RAL-913 4660 chr3R 30971198 30971233 chr3R 30971317 30971323 5 104 10.5 10.5 10.5 0.4 125 chr3R 30971198 exon 5-HT7 - chr3R 30971260 exon 5-HT7 - chr3R 30971323 exon 5-HT7 - chr3R_5_30970001 chr3R_30970001 RAL-913 4661 chr3R 30973953 30974021 chr3R 30974116 30974184 17 161 16.5 21.0 18.8 0.9 231 chr3R 30973953 intron 5-HT7 - chr3R 30974068 intron 5-HT7 - chr3R 30974184 intron 5-HT7 - chr3R_17_30970001 chr3R_30970001 RAL-913 4662 chr3R 30982569 30982619 chr3R 30982689 30982694 10 123 14.5 9.5 12.0 0.8 125 chr3R 30982569 intron 5-HT7 - chr3R 30982632 intron 5-HT7 - chr3R 30982694 intron 5-HT7 - chr3R_10_30980001 chr3R_30980001 RAL-913 4663 chr3R 30985638 30985712 chr3R 30985773 30985847 38 135 9.5 9.5 9.5 3.6 209 chr3R 30985638 intron 5-HT7 - chr3R 30985742 intron 5-HT7 - chr3R 30985847 intron 5-HT7 - chr3R_38_30985001 chr3R_30985001 RAL-913 4664 chr3R 31010632 31010686 chr3R 31010763 31010817 10 129 24.5 23.0 23.8 0.4 185 chr3R 31010632 intron 5-HT7 - chr3R 31010724 intron 5-HT7 - chr3R 31010817 intron 5-HT7 - chr3R_10_31010001 chr3R_31010001 RAL-913 4665 chr3R 31042071 31042086 chr3R 31042208 31042223 7 136 14.0 12.0 13.0 0.5 152 chr3R 31042071 exon CanA1 + chr3R 31042147 intron CanA1 + chr3R 31042223 intron CanA1 + chr3R_7_31040001 chr3R_31040001 RAL-913 4666 chr3R 31042087 31042143 chr3R 31042207 31042240 21 134 10.5 12.0 11.2 1.7 153 chr3R 31042087 intron CanA1 + chr3R 31042164 intron CanA1 + chr3R 31042240 intron CanA1 + chr3R_21_31040001 chr3R_31040001 RAL-913 4667 chr3R 31049460 31049506 chr3R 31049601 31049647 9 141 32.0 33.0 32.5 0.3 187 chr3R 31049460 intron Aph-4 + chr3R 31049554 intron Aph-4 + chr3R 31049647 intron Aph-4 + chr3R_9_31045001 chr3R_31045001 RAL-913 4668 chr3R 31055469 31055516 chr3R 31055624 31055671 5 155 11.5 10.5 11.0 0.4 202 chr3R 31055469 3` UTR dco - chr3R 31055570 3` UTR dco - chr3R 31055671 3` UTR dco - chr3R_5_31055001 chr3R_31055001 RAL-913 4669 chr3R 31074190 31074248 chr3R 31081838 31081896 springer 21 7646 14.0 10.5 12.2 1.6 7706 chr3R 31074190 intron Sox100B + chr3R 31078043 intron Sox100B + chr3R 31081896 exon Sox100B + chr3R_21_31075001 chr3R_31075001 RAL-913 4670 chr3R 31084861 31084930 chr3R 31084987 31085056 9 125 28.0 29.0 28.5 0.3 195 chr3R 31084861 intergenic not near genes chr3R 31084958 intergenic not near genes chr3R 31085056 intergenic not near genes chr3R_9_31080001 chr3R_31080001 RAL-913 4671 chr3R 31115070 31115104 chr3R 31115220 31115254 4 150 11.0 16.0 13.5 0.3 184 chr3R 31115070 intergenic not near genes chr3R 31115162 intergenic not near genes chr3R 31115254 intergenic not near genes chr3R_4_31115001 chr3R_31115001 RAL-913 4672 chr3R 31137117 31137120 chr3R 31137247 31137250 4 130 18.5 13.0 15.8 0.2 133 chr3R 31137117 intron Gycbeta100B + chr3R 31137184 intron Gycbeta100B + chr3R 31137250 intron Gycbeta100B + chr3R_4_31135001 chr3R_31135001 RAL-913 4673 chr3R 31137121 31137133 chr3R 31137246 31137263 6 127 16.5 13.0 14.8 0.4 142 chr3R 31137121 intron Gycbeta100B + chr3R 31137192 intron Gycbeta100B + chr3R 31137263 intron Gycbeta100B + chr3R_6_31135001 chr3R_31135001 RAL-913 4674 chr3R 31137135 31137183 chr3R 31137235 31137282 23 123 5.0 10.0 7.5 2.7 147 chr3R 31137135 intron Gycbeta100B + chr3R 31137208 intron Gycbeta100B + chr3R 31137282 intron Gycbeta100B + chr3R_23_31135001 chr3R_31135001 RAL-913 4675 chr3R 31156294 31156319 chr3R 31156474 31156499 8 180 20.5 15.0 17.8 0.4 205 chr3R 31156294 intron Gycbeta100B + chr3R 31156396 intron Gycbeta100B + chr3R 31156499 intron Gycbeta100B + chr3R_8_31155001 chr3R_31155001 RAL-913 4676 chr3R 31176932 31176983 chr3R 31177061 31177117 12 133 21.5 24.5 23.0 0.5 185 chr3R 31176932 intron Gycbeta100B + chr3R 31177024 intron Gycbeta100B + chr3R 31177117 intron Gycbeta100B + chr3R_12_31175001 chr3R_31175001 RAL-913 4677 chr3R 31265199 31265263 chr3R 31265330 31265394 18 130 28.5 15.5 22.0 0.8 195 chr3R 31265199 intergenic not near genes chr3R 31265296 intergenic ppk24 + chr3R 31265394 intergenic ppk24 + chr3R_18_31265001 chr3R_31265001 RAL-913 4678 chr3R 31274752 31274814 chr3R 31274877 31274943 7 128 31.5 27.5 29.5 0.2 191 chr3R 31274752 intergenic not near genes chr3R 31274848 intergenic not near genes chr3R 31274943 intergenic not near genes chr3R_7_31270001 chr3R_31270001 RAL-913 4679 chr3R 31279349 31279357 chr3R 31285570 31285598 diver 6 6233 24.5 12.5 18.5 0.3 6249 chr3R 31279349 intergenic not near genes chr3R 31282474 intergenic not near genes chr3R 31285598 intergenic not near genes chr3R_6_31280001 chr3R_31280001 RAL-913 4680 chr3R 31279360 31279401 chr3R 31285568 31285627 diver 19 6237 10.5 12.0 11.2 1.6 6267 chr3R 31279360 intergenic not near genes chr3R 31282494 intergenic not near genes chr3R 31285627 intergenic not near genes chr3R_19_31280001 chr3R_31280001 RAL-913 4681 chr3R 31326235 31326298 chr3R 31326653 31326716 14 418 9.0 28.5 18.8 0.7 481 chr3R 31326235 intron CG34347 + chr3R 31326476 intron CG34347 + chr3R 31326716 intron CG34347 + chr3R_14_31325001 chr3R_31325001 RAL-913 4682 chr3R 31330400 31330409 chr3R 31335652 31335661 copia 4 5250 18.5 12.0 15.2 0.2 5261 chr3R 31330400 intron CG34347 + chr3R 31333030 intron CG34347 + chr3R 31335661 intron CG34347 + chr3R_4_31330001 chr3R_31330001 RAL-913 4683 chr3R 31350912 31350973 chr3R 31351055 31351082 8 130 18.5 22.0 20.2 0.4 170 chr3R 31350912 intron CG34347 + chr3R 31350997 intron CG34347 + chr3R 31351082 intron CG34347 + chr3R_8_31350001 chr3R_31350001 RAL-913 4684 chr3R 31357615 31357676 chr3R 31357893 31357964 13 283 18.0 29.0 23.5 0.5 349 chr3R 31357615 intron CG34347 + chr3R 31357790 intron CG34347 + chr3R 31357964 intron CG34347 + chr3R_13_31355001 chr3R_31355001 RAL-913 4685 chr3R 31413047 31413054 chr3R 31418297 31418304 copia 4 5248 17.0 6.5 11.8 0.3 5257 chr3R 31413047 intron Gprk2 + chr3R 31415676 intron Gprk2 + chr3R 31418304 intron Gprk2 + chr3R_4_31415001 chr3R_31415001 RAL-913 4686 chr3R 31413061 31413123 chr3R 31418294 31418306 copia 21 5241 2.5 5.5 4.0 4.2 5245 chr3R 31413061 intron Gprk2 + chr3R 31415684 intron Gprk2 + chr3R 31418306 intron Gprk2 + chr3R_21_31415001 chr3R_31415001 RAL-913 4687 chr3R 31426839 31426893 chr3R 31426981 31427035 37 141 10.0 13.5 11.8 2.9 196 chr3R 31426839 intron Gprk2 + chr3R 31426937 intron Gprk2 + chr3R 31427035 intron Gprk2 + chr3R_37_31425001 chr3R_31425001 RAL-913 4688 chr3R 31431061 31431133 chr3R 31431195 31431269 21 134 21.5 18.5 20.0 1.0 208 chr3R 31431061 intron Gprk2 + chr3R 31431165 intron Gprk2 + chr3R 31431269 intron Gprk2 + chr3R_21_31430001 chr3R_31430001 RAL-913 4689 chr3R 31435318 31435387 chr3R 31435520 31435589 10 202 19.5 23.0 21.2 0.5 271 chr3R 31435318 intron Gprk2 + chr3R 31435454 intron Gprk2 + chr3R 31435589 intron Gprk2 + chr3R_10_31435001 chr3R_31435001 RAL-913 4690 chr3R 31446035 31446099 chr3R 31446175 31446242 19 140 22.5 25.0 23.8 0.8 207 chr3R 31446035 intron Gprk2 + chr3R 31446138 intron Gprk2 + chr3R 31446242 intron Gprk2 + chr3R_19_31445001 chr3R_31445001 RAL-913 4691 chr3R 31448589 31448624 chr3R 31448688 31448750 6 100 24.5 24.0 24.2 0.2 161 chr3R 31448589 intron Gprk2 + chr3R 31448670 intron Gprk2 + chr3R 31448750 intron Gprk2 + chr3R_6_31445001 chr3R_31445001 RAL-913 4692 chr3R 31539293 31539353 chr3R 31539428 31539488 18 135 18.5 23.0 20.8 0.8 195 chr3R 31539293 intergenic not near genes chr3R 31539390 intergenic not near genes chr3R 31539488 intergenic not near genes chr3R_18_31535001 chr3R_31535001 RAL-913 4693 chr3R 31539816 31539881 chr3R 31539950 31540016 18 130 21.0 22.5 21.8 0.8 200 chr3R 31539816 intergenic not near genes chr3R 31539916 intergenic not near genes chr3R 31540016 intergenic not near genes chr3R_18_31535001 chr3R_31535001 RAL-913 4694 chr3R 31549776 31549833 chr3R 31549909 31549982 22 146 28.5 33.0 30.8 0.7 206 chr3R 31549776 intron nyo + chr3R 31549879 intron nyo + chr3R 31549982 intron nyo + chr3R_22_31545001 chr3R_31545001 RAL-913 4695 chr3R 31558464 31558534 chr3R 31558633 31558703 11 169 27.5 27.5 27.5 0.4 239 chr3R 31558464 exon nyo + chr3R 31558584 intron nyo + chr3R 31558703 intron nyo + chr3R_11_31555001 chr3R_31555001 RAL-913 4696 chr3R 31606095 31606171 chr3R 31606307 31606372 8 208 27.0 24.5 25.8 0.3 277 chr3R 31606095 intron CycG - chr3R 31606234 intron CycG - chr3R 31606372 intron CycG - chr3R_8_31605001 chr3R_31605001 RAL-913 4697 chr3R 31642226 31642245 chr3R 31642523 31642530 6 289 29.0 20.0 24.5 0.2 304 chr3R 31642226 intron kek6 + chr3R 31642378 intron kek6 + chr3R 31642530 intron kek6 + chr3R_6_31640001 chr3R_31640001 RAL-913 4698 chr3R 31646421 31646462 chr3R 31646632 31646685 8 222 18.0 24.0 21.0 0.4 264 chr3R 31646421 intron kek6 + chr3R 31646553 intron kek6 + chr3R 31646685 intron kek6 + chr3R_8_31645001 chr3R_31645001 RAL-913 4699 chr3R 31691494 31691513 chr3R 31696310 31696329 Doc 9 4816 18.0 12.5 15.2 0.6 4835 chr3R 31691494 intergenic not near genes chr3R 31693912 intergenic not near genes chr3R 31696329 intergenic not near genes chr3R_9_31690001 chr3R_31690001 RAL-913 4700 chr3R 31691516 31691555 chr3R 31696305 31696366 Doc 28 4811 9.0 11.5 10.2 2.5 4850 chr3R 31691516 intergenic not near genes chr3R 31693941 intergenic not near genes chr3R 31696366 intergenic not near genes chr3R_28_31690001 chr3R_31690001 RAL-913 4701 chr3R 31774831 31774895 chr3R 31775026 31775090 11 193 27.0 28.0 27.5 0.4 259 chr3R 31774831 3` UTR sip3 + chr3R 31774960 3` UTR sip3 + chr3R 31775090 3` UTR,3` UTR sip3 +,CG2126 - chr3R_11_31770001 chr3R_31770001 RAL-913 4702 chr3R 31801875 31801923 chr3R 31802022 31802024 12 154 26.5 25.5 26.0 0.4 149 chr3R 31801875 intron,exon CG42233 -,Ir100a + chr3R 31801950 intron,exon CG42233 -,Ir100a + chr3R 31802024 intron,exon CG42233 -,Ir100a + chr3R_12_31800001 chr3R_31800001 RAL-913 4703 chr3R 31808643 31808707 chr3R 31808771 31808835 9 126 31.0 31.5 31.2 0.3 192 chr3R 31808643 intron CG11576 - chr3R 31808739 intron CG11576 - chr3R 31808835 intron CG11576 - chr3R_9_31805001 chr3R_31805001 RAL-913 4704 chr3R 31858124 31858204 chr3R 31858274 31858357 16 149 0.0 6.0 3.0 4.0 233 chr3R 31858124 intron heph - chr3R 31858240 intron heph - chr3R 31858357 intron heph - chr3R_16_31855001 chr3R_31855001 RAL-913 4705 chr3R 31858687 31858774 chr3R 31858833 31858908 8 136 18.0 20.0 19.0 0.4 221 chr3R 31858687 intron heph - chr3R 31858798 intron heph - chr3R 31858908 intron heph - chr3R_8_31855001 chr3R_31855001 RAL-913 4706 chr3R 31885470 31885537 chr3R 31885597 31885664 14 126 25.0 25.0 25.0 0.5 194 chr3R 31885470 intron heph - chr3R 31885567 intron heph - chr3R 31885664 intron heph - chr3R_14_31885001 chr3R_31885001 RAL-913 4707 chr3R 31887533 31887599 chr3R 31887664 31887730 24 130 16.5 19.5 18.0 1.3 197 chr3R 31887533 intron heph - chr3R 31887632 intron heph - chr3R 31887730 intron heph - chr3R_24_31885001 chr3R_31885001 RAL-913 4708 chr3R 31898038 31898080 chr3R 31898239 31898281 7 201 23.0 29.5 26.2 0.3 243 chr3R 31898038 intron heph - chr3R 31898160 intron heph - chr3R 31898281 intron heph - chr3R_7_31895001 chr3R_31895001 RAL-913 4709 chr3R 31907224 31907257 chr3R 31907359 31907376 4 128 26.0 21.0 23.5 0.2 152 chr3R 31907224 intron heph - chr3R 31907300 intron heph - chr3R 31907376 intron heph - chr3R_4_31905001 chr3R_31905001 RAL-913 4710 chr3R 31907259 31907282 chr3R 31907351 31907384 5 119 22.5 21.5 22.0 0.2 125 chr3R 31907259 intron heph - chr3R 31907322 intron heph - chr3R 31907384 intron heph - chr3R_5_31905001 chr3R_31905001 RAL-913 4711 chr3R 31923212 31923271 chr3R 31923583 31923642 14 372 52.0 47.0 49.5 0.3 430 chr3R 31923212 intron heph - chr3R 31923427 intron heph - chr3R 31923642 intron heph - chr3R_14_31920001 chr3R_31920001 RAL-913 4712 chr3R 31930849 31931147 chr3R 31931009 31931280 14 155 21.0 16.5 18.8 0.7 431 chr3R 31930849 intron heph - chr3R 31931064 intron heph - chr3R 31931280 intron heph - chr3R_14_31930001 chr3R_31930001 RAL-913 4713 chr3R 31931149 31931216 chr3R 31931282 31931349 36 132 7.0 13.0 10.0 3.3 200 chr3R 31931149 intron heph - chr3R 31931249 intron heph - chr3R 31931349 intron heph - chr3R_36_31930001 chr3R_31930001 RAL-913 4714 chr3R 31940168 31940236 chr3R 31940298 31940341 19 129 32.0 28.0 30.0 0.6 173 chr3R 31940168 intron heph - chr3R 31940254 intron heph - chr3R 31940341 intron heph - chr3R_19_31940001 chr3R_31940001 RAL-913 4715 chr3R 31997947 31998015 chr3R 32005467 32005518 blood 22 7517 5.0 2.5 3.8 4.6 7571 chr3R 31997947 intron heph - chr3R 32001732 intron heph - chr3R 32005518 intron heph - chr3R_22_32000001 chr3R_32000001 RAL-913 4716 chr3R 32009945 32010014 chr3R 32010115 32010177 19 173 23.0 15.5 19.2 0.9 232 chr3R 32009945 intron heph - chr3R 32010061 intron heph - chr3R 32010177 intron heph - chr3R_19_32010001 chr3R_32010001 RAL-913 4717 chr4 76453 76503 chr4 81946 81996 I-element 29 5491 12.0 11.5 11.8 2.3 5543 chr4 76453 intron pan + chr4 79224 intron pan + chr4 81996 intron pan + chr4_29_75001 chr4_75001 RAL-913 4718 chr4 319950 320015 chr4 328176 328221 Stalker2 28 8225 8.5 7.5 8.0 3.1 8271 chr4 319950 3` UTR CG32850 + chr4 324086 intron CG32850 + chr4 328221 3` UTR,3` UTR CG32850 +,PMCA - chr4_28_320001 chr4_320001 RAL-913 4719 chr4 671567 671585 chr4 680200 680218 Tirant 10 8633 18.5 15.5 17.0 0.6 8651 chr4 671567 intron CG11360 + chr4 675892 intron CG11360 + chr4 680218 intron CG11360 + chr4_10_675001 chr4_675001 RAL-913 4720 chr4 671587 671627 chr4 680199 680260 Tirant 21 8630 11.5 15.5 13.5 1.4 8673 chr4 671587 intron CG11360 + chr4 675924 intron CG11360 + chr4 680260 intron CG11360 + chr4_21_675001 chr4_675001 RAL-913 4721 chr4 959580 959632 chr4 959809 959861 16 227 11.0 5.0 8.0 1.8 281 chr4 959580 intergenic CR44030 +,CR45201 - chr4 959720 5` UTR CR44030 + chr4 959861 5` UTR CR44030 + chr4_16_955001 chr4_955001 RAL-913 4722 chr4 959638 959652 chr4 959807 959866 10 220 5.0 5.0 5.0 1.7 228 chr4 959638 intergenic CR44030 +,CR45201 - chr4 959752 5` UTR CR44030 + chr4 959866 5` UTR CR44030 + chr4_10_955001 chr4_955001 RAL-913 4723 chr4 972453 972523 chr4 972585 972655 31 132 10.0 9.5 9.8 2.9 202 chr4 972453 intron fuss - chr4 972554 intron fuss - chr4 972655 intron fuss - chr4_31_970001 chr4_970001 RAL-913 4724 chrX 295809 295876 chrX 303479 303546 412 24 7669 8.5 7.5 8.0 2.7 7737 chrX 295809 intron CG3777 + chrX 299678 intron CG3777 + chrX 303546 intron CG3777 + chrX_24_295001 chrX_295001 RAL-913 4725 chrX 318436 318490 chrX 323563 323626 flea 19 5136 5.5 7.0 6.2 2.6 5190 chrX 318436 intron,intron CG3777 +,CG32816 - chrX 321031 intron,intron CG3777 +,CG32816 - chrX 323626 intron,intron CG3777 +,CG32816 - chrX_19_320001 chrX_320001 RAL-913 4726 chrX 325586 325650 chrX 325721 325785 24 133 7.0 8.0 7.5 2.8 199 chrX 325586 intron,intron CG3777 +,CG32816 - chrX 325686 intron,intron CG3777 +,CG32816 - chrX 325785 intron,intron CG3777 +,CG32816 - chrX_24_325001 chrX_325001 RAL-913 4727 chrX 428381 428444 chrX 434614 434679 3S18 29 6235 7.0 9.5 8.2 3.2 6298 chrX 428381 intron CG32816 - chrX 431530 intron CG32816 - chrX 434679 intron CG32816 - chrX_29_430001 chrX_430001 RAL-913 4728 chrX 440950 441024 chrX 441078 441152 14 128 7.0 6.5 6.8 1.8 202 chrX 440950 intron CG32816 - chrX 441051 intron CG32816 - chrX 441152 intron CG32816 - chrX_14_440001 chrX_440001 RAL-913 4729 chrX 450314 450393 chrX 450442 450521 27 128 6.5 6.5 6.5 3.6 207 chrX 450314 intron CG32816 - chrX 450418 intron CG32816 - chrX 450521 intron CG32816 - chrX_27_450001 chrX_450001 RAL-913 4730 chrX 494569 494624 chrX 494711 494766 30 142 6.0 8.5 7.2 3.7 197 chrX 494569 intergenic CG17778 + chrX 494668 5` UTR CG17778 + chrX 494766 intron CG17778 + chrX_30_490001 chrX_490001 RAL-913 4731 chrX 547595 547660 chrX 547889 547954 28 294 8.0 7.5 7.8 3.2 359 chrX 547595 intron Appl + chrX 547774 intron Appl + chrX 547954 intron Appl + chrX_28_545001 chrX_545001 RAL-913 4732 chrX 551382 551395 chrX 558993 559007 412 5 7612 18.0 6.5 12.2 0.4 7625 chrX 551382 intron Appl + chrX 555194 intron Appl + chrX 559007 intron Appl + chrX_5_555001 chrX_555001 RAL-913 4733 chrX 551397 551450 chrX 558988 559062 412 21 7605 7.5 6.5 7.0 2.6 7665 chrX 551397 intron Appl + chrX 555230 intron Appl + chrX 559062 intron Appl + chrX_21_555001 chrX_555001 RAL-913 4734 chrX 617931 618004 chrX 618061 618123 29 129 4.5 7.5 6.0 4.1 192 chrX 617931 intron CG13366 - chrX 618027 intron CG13366 - chrX 618123 intron CG13366 - chrX_29_615001 chrX_615001 RAL-913 4735 chrX 667612 667677 chrX 667746 667811 17 134 5.5 0.0 2.8 4.5 199 chrX 667612 intergenic not near genes chrX 667712 intergenic not near genes chrX 667811 intergenic not near genes chrX_17_665001 chrX_665001 RAL-913 4736 chrX 670200 670290 chrX 670342 670389 20 129 0.0 2.5 1.2 9.1 189 chrX 670200 intergenic not near genes chrX 670294 intergenic not near genes chrX 670389 intergenic not near genes chrX_20_670001 chrX_670001 RAL-913 4737 chrX 680790 680863 chrX 680923 680996 20 128 5.0 4.0 4.5 3.6 206 chrX 680790 intergenic not near genes chrX 680893 intergenic not near genes chrX 680996 intergenic not near genes chrX_20_680001 chrX_680001 RAL-913 4738 chrX 706741 706814 chrX 707163 707228 20 416 0.0 11.0 5.5 3.1 487 chrX 706741 intron sdk + chrX 706984 intron sdk + chrX 707228 intron sdk + chrX_20_705001 chrX_705001 RAL-913 4739 chrX 718301 718358 chrX 718431 718488 19 129 3.5 12.0 7.8 2.2 187 chrX 718301 intron sdk + chrX 718394 intron sdk + chrX 718488 intron sdk + chrX_19_715001 chrX_715001 RAL-913 4740 chrX 778099 778160 chrX 778222 778289 12 134 5.0 0.0 2.5 3.4 190 chrX 778099 intron fz3 + chrX 778194 intron fz3 + chrX 778289 intron fz3 + chrX_12_775001 chrX_775001 RAL-913 4741 chrX 806743 806812 chrX 806883 806958 18 143 8.0 7.5 7.8 2.0 215 chrX 806743 intron Sec22 + chrX 806850 intron Sec22 + chrX 806958 intron Sec22 + chrX_18_805001 chrX_805001 RAL-913 4742 chrX 812230 812292 chrX 817903 817969 297 20 5678 9.5 10.0 9.8 1.9 5739 chrX 812230 intron CG43867 - chrX 815100 intron CG43867 - chrX 817969 intron CG43867 - chrX_20_815001 chrX_815001 RAL-913 4743 chrX 827559 827632 chrX 835401 835468 roo 20 7837 10.5 11.5 11.0 1.7 7909 chrX 827559 intron CG43867 - chrX 831514 intron CG43867 - chrX 835468 intron CG43867 - chrX_20_830001 chrX_830001 RAL-913 4744 chrX 885791 885826 chrX 886053 886082 14 260 10.5 0.0 5.2 2.3 291 chrX 885791 intron CG43867 - chrX 885936 intron CG43867 - chrX 886082 intron CG43867 - chrX_14_885001 chrX_885001 RAL-913 4745 chrX 906667 906727 chrX 908506 908566 S-element 20 1836 9.0 10.0 9.5 1.9 1899 chrX 906667 intron CG43867 - chrX 907616 intron CG43867 - chrX 908566 intron CG43867 - chrX_20_905001 chrX_905001 RAL-913 4746 chrX 911980 912047 chrX 912117 912187 18 138 5.5 8.0 6.8 2.3 207 chrX 911980 intron CG43867 - chrX 912084 intron CG43867 - chrX 912187 intron CG43867 - chrX_18_910001 chrX_910001 RAL-913 4747 chrX 1024405 1024465 chrX 1024537 1024597 32 130 3.5 8.0 5.8 4.7 192 chrX 1024405 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX 1024501 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX 1024597 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX_32_1020001 chrX_1020001 RAL-913 4748 chrX 1042466 1042537 chrX 1042591 1042592 27 122 7.5 10.5 9.0 2.7 126 chrX 1042466 5` UTR su(w[a]) + chrX 1042529 5` UTR su(w[a]) + chrX 1042592 5` UTR su(w[a]) + chrX_27_1040001 chrX_1040001 RAL-913 4749 chrX 1050516 1050580 chrX 1050639 1050695 13 122 4.0 6.0 5.0 2.2 179 chrX 1050516 intron CR44779 + chrX 1050606 intron CR44779 + chrX 1050695 intron CR44779 + chrX_13_1050001 chrX_1050001 RAL-913 4750 chrX 1063729 1063749 chrX 1072557 1072592 roo 7 8841 15.0 9.5 12.2 0.5 8863 chrX 1063729 intron CR44779 + chrX 1068160 intron CR44779 + chrX 1072592 intron CR44779 + chrX_7_1065001 chrX_1065001 RAL-913 4751 chrX 1357733 1357796 chrX 1367953 1368016 Doc 25 10219 15.0 9.5 12.2 1.9 10283 chrX 1357733 intergenic png - chrX 1362874 intergenic not near genes chrX 1368016 intergenic not near genes chrX_25_1360001 chrX_1360001 RAL-913 4752 chrX 1517999 1518062 chrX 1523451 1523514 jockey 22 5451 8.0 12.0 10.0 2.0 5515 chrX 1517999 intergenic inc + chrX 1520756 intergenic not near genes chrX 1523514 intergenic not near genes chrX_22_1520001 chrX_1520001 RAL-913 4753 chrX 1559868 1559943 chrX 1560002 1560069 21 133 7.5 3.5 5.5 3.2 201 chrX 1559868 intron Mur2B - chrX 1559968 intron Mur2B - chrX 1560069 intron Mur2B - chrX_21_1555001 chrX_1555001 RAL-913 4754 chrX 1930492 1930557 chrX 1938113 1938178 opus 33 7620 7.0 3.5 5.2 5.3 7686 chrX 1930492 3` UTR CG11596 + chrX 1934335 intergenic not near genes chrX 1938178 3` UTR CG3857 - chrX_33_1930001 chrX_1930001 RAL-913 4755 chrX 1954843 1954872 chrX 1962832 1962846 Stalker2 5 7984 12.0 3.5 7.8 0.6 8003 chrX 1954843 intron Hr4 + chrX 1958844 intron Hr4 + chrX 1962846 intron Hr4 + chrX_5_1955001 chrX_1955001 RAL-913 4756 chrX 1954874 1954919 chrX 1962829 1962863 Stalker2 11 7967 4.0 2.5 3.2 2.6 7989 chrX 1954874 intron Hr4 + chrX 1958868 intron Hr4 + chrX 1962863 intron Hr4 + chrX_11_1955001 chrX_1955001 RAL-913 4757 chrX 1982750 1982822 chrX 1982905 1982977 31 152 4.5 6.0 5.2 5.0 227 chrX 1982750 intron Hr4 + chrX 1982864 intron Hr4 + chrX 1982977 intron Hr4 + chrX_31_1980001 chrX_1980001 RAL-913 4758 chrX 2146616 2146676 chrX 2146758 2146819 17 140 10.0 8.0 9.0 1.7 203 chrX 2146616 intron Pgd + chrX 2146718 intron Pgd + chrX 2146819 intron Pgd + chrX_17_2145001 chrX_2145001 RAL-913 4759 chrX 2308803 2308819 chrX 2317434 2317450 Tirant 5 8630 7.5 13.0 10.2 0.4 8647 chrX 2308803 intron phl + chrX 2313126 intron phl + chrX 2317450 intron phl + chrX_5_2310001 chrX_2310001 RAL-913 4760 chrX 2399800 2399832 chrX 2408203 2408204 roo 6 8394 13.0 1.5 7.2 0.7 8404 chrX 2399800 intergenic not near genes chrX 2404002 intergenic not near genes chrX 2408204 intergenic not near genes chrX_6_2400001 chrX_2400001 RAL-913 4761 chrX 2399839 2399866 chrX 2408192 2408257 roo 7 8380 8.0 0.0 4.0 1.4 8418 chrX 2399839 intergenic not near genes chrX 2404048 intergenic not near genes chrX 2408257 intergenic not near genes chrX_7_2400001 chrX_2400001 RAL-913 4762 chrX 2429610 2429658 chrX 2429741 2429789 8 131 0.0 3.0 1.5 3.2 179 chrX 2429610 intergenic not near genes chrX 2429700 intergenic not near genes chrX 2429789 intergenic not near genes chrX_8_2425001 chrX_2425001 RAL-913 4763 chrX 2505661 2505691 chrX 2505795 2505825 6 133 7.0 15.0 11.0 0.5 164 chrX 2505661 intron trol - chrX 2505743 intron trol - chrX 2505825 intron trol - chrX_6_2505001 chrX_2505001 RAL-913 4764 chrX 2555586 2555636 chrX 2555713 2555737 18 124 8.0 8.5 8.2 2.0 151 chrX 2555586 intron Pdfr + chrX 2555662 intron Pdfr + chrX 2555737 intron Pdfr + chrX_18_2555001 chrX_2555001 RAL-913 4765 chrX 2578775 2578842 chrX 2578929 2578996 14 154 4.0 7.5 5.8 2.1 221 chrX 2578775 intergenic Pdfr +,Vha36-3 - chrX 2578886 intergenic Vha36-3 -,Pdfr + chrX 2578996 intergenic Vha36-3 -,Pdfr + chrX_14_2575001 chrX_2575001 RAL-913 4766 chrX 2610362 2610410 chrX 2617510 2617555 HMS-Beagle 10 7160 6.5 10.5 8.5 1.1 7193 chrX 2610362 intergenic CG8636 - chrX 2613958 intergenic not near genes chrX 2617555 intergenic Tsp3A - chrX_10_2610001 chrX_2610001 RAL-913 4767 chrX 2635327 2635401 chrX 2635486 2635560 24 155 6.0 12.0 9.0 2.4 233 chrX 2635327 intron sgg + chrX 2635444 intron sgg + chrX 2635560 intron sgg + chrX_24_2635001 chrX_2635001 RAL-913 4768 chrX 2664344 2664411 chrX 2665540 2665595 1360 29 1195 7.5 8.0 7.8 3.3 1251 chrX 2664344 intron sgg + chrX 2664970 intron sgg + chrX 2665595 intron sgg + chrX_29_2660001 chrX_2660001 RAL-913 4769 chrX 2697906 2697980 chrX 2698474 2698548 20 569 47.0 22.0 34.5 0.6 642 chrX 2697906 exon CG2658 - chrX 2698227 intergenic CG2658 -,CG2662 + chrX 2698548 intergenic CG2662 +,CG2658 - chrX_20_2695001 chrX_2695001 RAL-913 4770 chrX 2759816 2759893 chrX 2759955 2759997 41 138 3.0 6.5 4.8 7.1 181 chrX 2759816 intron kirre + chrX 2759906 intron kirre + chrX 2759997 intron kirre + chrX_41_2755001 chrX_2755001 RAL-913 4771 chrX 2823755 2823772 chrX 2832353 2832363 roo 5 8596 15.5 12.5 14.0 0.3 8608 chrX 2823755 intron kirre + chrX 2828059 intron kirre + chrX 2832363 intron kirre + chrX_5_2825001 chrX_2825001 RAL-913 4772 chrX 2844854 2844924 chrX 2852314 2852384 mdg1 22 7460 10.5 8.0 9.2 2.2 7530 chrX 2844854 intron kirre + chrX 2848619 intron kirre + chrX 2852384 intron kirre + chrX_22_2845001 chrX_2845001 RAL-913 4773 chrX 2864422 2864432 chrX 2864550 2864560 8 128 0.0 15.5 7.8 0.9 138 chrX 2864422 intron kirre + chrX 2864491 intron kirre + chrX 2864560 intron kirre + chrX_8_2860001 chrX_2860001 RAL-913 4774 chrX 2888073 2888138 chrX 2888196 2888266 21 126 8.5 7.5 8.0 2.3 193 chrX 2888073 intron kirre + chrX 2888170 intron kirre + chrX 2888266 intron kirre + chrX_21_2885001 chrX_2885001 RAL-913 4775 chrX 3057978 3058045 chrX 3058269 3058317 pogo 28 290 5.5 6.5 6.0 4.0 339 chrX 3057978 intron kirre + chrX 3058148 intron kirre + chrX 3058317 intron kirre + chrX_28_3055001 chrX_3055001 RAL-913 4776 chrX 3075587 3075655 chrX 3080944 3080979 Transpac 26 5355 8.0 3.5 5.8 3.8 5392 chrX 3075587 intron kirre + chrX 3078283 intron kirre + chrX 3080979 intron kirre + chrX_26_3075001 chrX_3075001 RAL-913 4777 chrX 3103457 3103470 chrX 3103592 3103606 5 136 6.5 3.5 5.0 0.8 149 chrX 3103457 intron kirre + chrX 3103532 intron kirre + chrX 3103606 intron kirre + chrX_5_3100001 chrX_3100001 RAL-913 4778 chrX 3109408 3109469 chrX 3109535 3109596 16 127 4.5 2.0 3.2 3.8 188 chrX 3109408 intron kirre + chrX 3109502 intron kirre + chrX 3109596 intron kirre + chrX_16_3105001 chrX_3105001 RAL-913 4779 chrX 3146934 3146974 chrX 3147072 3147122 14 160 7.0 2.0 4.5 2.5 188 chrX 3146934 intron N + chrX 3147028 intron N + chrX 3147122 intron N + chrX_14_3145001 chrX_3145001 RAL-913 4780 chrX 3197187 3197227 chrX 3197298 3197349 9 114 8.5 13.5 11.0 0.8 162 chrX 3197187 intron dnc + chrX 3197268 intron dnc + chrX 3197349 intron dnc + chrX_9_3195001 chrX_3195001 RAL-913 4781 chrX 3199520 3199593 chrX 3199646 3199724 34 130 5.5 4.0 4.8 5.9 204 chrX 3199520 intron dnc + chrX 3199622 intron dnc + chrX 3199724 intron dnc + chrX_34_3195001 chrX_3195001 RAL-913 4782 chrX 3206435 3206496 chrX 3206564 3206624 9 129 2.0 8.0 5.0 1.5 189 chrX 3206435 intron dnc + chrX 3206530 intron dnc + chrX 3206624 intron dnc + chrX_9_3205001 chrX_3205001 RAL-913 4783 chrX 3217460 3217467 chrX 3217605 3217612 6 145 13.0 16.0 14.5 0.4 152 chrX 3217460 intron dnc + chrX 3217536 intron dnc + chrX 3217612 intron dnc + chrX_6_3215001 chrX_3215001 RAL-913 4784 chrX 3218491 3218510 chrX 3227690 3227709 roo 5 9199 2.5 11.0 6.8 0.6 9218 chrX 3218491 intron dnc + chrX 3223100 intron dnc + chrX 3227709 intron dnc + chrX_5_3220001 chrX_3220001 RAL-913 4785 chrX 3243612 3243648 chrX 3243752 3243788 17 140 9.5 10.5 10.0 1.5 176 chrX 3243612 intron dnc + chrX 3243700 intron dnc + chrX 3243788 intron dnc + chrX_17_3240001 chrX_3240001 RAL-913 4786 chrX 3275478 3275537 chrX 3275615 3275674 19 132 11.5 4.5 8.0 2.1 196 chrX 3275478 intron dnc + chrX 3275576 intron dnc + chrX 3275674 intron dnc + chrX_19_3275001 chrX_3275001 RAL-913 4787 chrX 3306303 3306375 chrX 3306435 3306507 22 131 8.0 0.5 4.2 4.2 204 chrX 3306303 intron dnc + chrX 3306405 intron dnc + chrX 3306507 intron dnc + chrX_22_3305001 chrX_3305001 RAL-913 4788 chrX 3351768 3351813 chrX 3351889 3351944 13 127 8.0 13.5 10.8 1.1 176 chrX 3351768 intergenic not near genes chrX 3351856 intergenic not near genes chrX 3351944 intergenic not near genes chrX_13_3350001 chrX_3350001 RAL-913 4789 chrX 3408941 3409010 chrX 3409067 3409137 18 125 6.0 8.0 7.0 2.2 196 chrX 3408941 intron,intron CR44999 +,CG12535 - chrX 3409039 intron,intron CR44999 +,CG12535 - chrX 3409137 intron,intron CR44999 +,CG12535 - chrX_18_3405001 chrX_3405001 RAL-913 4790 chrX 3414978 3415004 chrX 3421213 3421224 3S18 8 6232 13.0 8.5 10.8 0.7 6246 chrX 3414978 intron,intron CR44999 +,CG12535 - chrX 3418101 intron,intron CR44999 +,CG12535 - chrX 3421224 intron,intron CR44999 +,CG12535 - chrX_8_3415001 chrX_3415001 RAL-913 4791 chrX 3415005 3415037 chrX 3421202 3421272 3S18 17 6231 7.0 8.0 7.5 2.0 6267 chrX 3415005 intron,intron CR44999 +,CG12535 - chrX 3418138 intron,intron CR44999 +,CG12535 - chrX 3421272 intron,intron CR44999 +,CG12535 - chrX_17_3415001 chrX_3415001 RAL-913 4792 chrX 3433394 3433432 chrX 3433521 3433534 8 116 13.0 13.0 13.0 0.6 140 chrX 3433394 intron,intron CR44999 +,CG12535 - chrX 3433464 intron,intron CR44999 +,CG12535 - chrX 3433534 intron,intron CR44999 +,CG12535 - chrX_8_3430001 chrX_3430001 RAL-913 4793 chrX 3434223 3434244 chrX 3434354 3434375 6 130 6.5 5.5 6.0 0.9 152 chrX 3434223 intron,intron CR44999 +,CG12535 - chrX 3434299 intron,intron CR44999 +,CG12535 - chrX 3434375 intron,intron CR44999 +,CG12535 - chrX_6_3430001 chrX_3430001 RAL-913 4794 chrX 3459942 3460003 chrX 3460076 3460138 31 135 8.0 8.5 8.2 3.4 196 chrX 3459942 intron,5` UTR CR44999 +,CG16782 - chrX 3460040 intron,5` UTR CR44999 +,CG16782 - chrX 3460138 intron,5` UTR CR44999 +,CG16782 - chrX_31_3460001 chrX_3460001 RAL-913 4795 chrX 3493051 3493083 chrX 3502260 3502292 roo 12 9207 14.0 4.0 9.0 1.2 9241 chrX 3493051 intron,intron CR44999 +,Gas8 - chrX 3497672 intron,intron CR44999 +,Gas8 - chrX 3502292 intron,intron CR44999 +,Gas8 - chrX_12_3495001 chrX_3495001 RAL-913 4796 chrX 3535356 3535433 chrX 3535499 3535574 27 142 5.0 8.0 6.5 3.6 218 chrX 3535356 intron CG32791 - chrX 3535465 intron CG32791 - chrX 3535574 intron CG32791 - chrX_27_3535001 chrX_3535001 RAL-913 4797 chrX 3567238 3567292 chrX 3567373 3567427 9 135 7.5 4.0 5.8 1.3 189 chrX 3567238 intron,intron CG32791 -,ppk8 + chrX 3567332 intron,intron CG32791 -,ppk8 + chrX 3567427 intron,intron CG32791 -,ppk8 + chrX_9_3565001 chrX_3565001 RAL-913 4798 chrX 3597509 3597574 chrX 3619727 3619792 roo 22 22216 7.0 7.0 7.0 2.8 22283 chrX 3597509 intron AstA-R1 + chrX 3608650 intron AstA-R1 + chrX 3619792 intron AstA-R1 + chrX_22_3605001 chrX_3605001 RAL-913 4799 chrX 3626087 3626120 chrX 3626228 3626254 9 140 4.0 0.0 2.0 3.0 167 chrX 3626087 intron AstA-R1 + chrX 3626170 intron AstA-R1 + chrX 3626254 intron AstA-R1 + chrX_9_3625001 chrX_3625001 RAL-913 4800 chrX 3646408 3646424 chrX 3646542 3646558 9 133 6.5 12.5 9.5 0.9 150 chrX 3646408 intron AstA-R1 + chrX 3646483 intron AstA-R1 + chrX 3646558 intron AstA-R1 + chrX_9_3645001 chrX_3645001 RAL-913 4801 chrX 3657373 3657381 chrX 3657503 3657511 5 130 16.0 5.5 10.8 0.4 138 chrX 3657373 intron AstA-R1 + chrX 3657442 intron AstA-R1 + chrX 3657511 intron AstA-R1 + chrX_5_3655001 chrX_3655001 RAL-913 4802 chrX 3657385 3657442 chrX 3657501 3657572 26 127 5.0 4.5 4.8 4.5 187 chrX 3657385 intron AstA-R1 + chrX 3657478 intron AstA-R1 + chrX 3657572 intron AstA-R1 + chrX_26_3655001 chrX_3655001 RAL-913 4803 chrX 3703665 3703676 chrX 3703803 3703814 4 138 7.0 7.0 7.0 0.5 149 chrX 3703665 intergenic CR45102 + chrX 3703740 intergenic CR45102 + chrX 3703814 intergenic not near genes chrX_4_3700001 chrX_3700001 RAL-913 4804 chrX 3713057 3713129 chrX 3713215 3713288 22 159 7.5 6.5 7.0 2.8 231 chrX 3713057 intron Rala - chrX 3713172 intron Rala - chrX 3713288 intron Rala - chrX_22_3710001 chrX_3710001 RAL-913 4805 chrX 3726726 3726786 chrX 3730168 3730233 NOF 22 3446 8.0 8.5 8.2 2.4 3507 chrX 3726726 intron tlk + chrX 3728480 intron tlk + chrX 3730233 intron tlk + chrX_22_3725001 chrX_3725001 RAL-913 4806 chrX 3787448 3787461 chrX 3787575 3787588 4 127 5.5 10.0 7.8 0.5 140 chrX 3787448 3` UTR tlk + chrX 3787518 3` UTR tlk + chrX 3787588 3` UTR tlk + chrX_4_3785001 chrX_3785001 RAL-913 4807 chrX 3842302 3842353 chrX 3842570 3842621 pogo 25 268 7.5 7.5 7.5 2.9 319 chrX 3842302 intron ec + chrX 3842462 intron ec + chrX 3842621 intron ec + chrX_25_3840001 chrX_3840001 RAL-913 4808 chrX 3862779 3862843 chrX 3862916 3862980 18 137 4.5 7.0 5.8 2.6 201 chrX 3862779 intergenic yin - chrX 3862880 intergenic yin - chrX 3862980 3` UTR yin - chrX_18_3860001 chrX_3860001 RAL-913 4809 chrX 3866056 3866103 chrX 3866184 3866231 24 127 11.0 1.0 6.0 3.4 175 chrX 3866056 intron yin - chrX 3866144 intron yin - chrX 3866231 intron yin - chrX_24_3865001 chrX_3865001 RAL-913 4810 chrX 3950640 3950701 chrX 3950996 3951063 24 361 7.0 8.5 7.8 2.7 423 chrX 3950640 intron Vap-33A + chrX 3950852 intron Vap-33A + chrX 3951063 intron Vap-33A + chrX_24_3950001 chrX_3950001 RAL-913 4811 chrX 3986832 3986889 chrX 3994515 3994572 412 24 7683 9.0 9.5 9.2 2.4 7740 chrX 3986832 intergenic not near genes chrX 3990702 intergenic not near genes chrX 3994572 intergenic not near genes chrX_24_3990001 chrX_3990001 RAL-913 4812 chrX 4029497 4029554 chrX 4029737 4029794 10 240 8.0 9.5 8.8 1.0 297 chrX 4029497 intergenic not near genes chrX 4029646 intergenic not near genes chrX 4029794 intergenic not near genes chrX_10_4025001 chrX_4025001 RAL-913 4813 chrX 4046284 4046353 chrX 4046415 4046471 25 128 8.5 5.5 7.0 3.1 187 chrX 4046284 intergenic not near genes chrX 4046378 intergenic not near genes chrX 4046471 intergenic not near genes chrX_25_4045001 chrX_4045001 RAL-913 4814 chrX 4047424 4047497 chrX 4047587 4047646 29 162 2.5 4.5 3.5 6.4 222 chrX 4047424 intergenic CR45482 - chrX 4047535 intergenic CR45482 - chrX 4047646 3` UTR CR45482 - chrX_29_4045001 chrX_4045001 RAL-913 4815 chrX 4048456 4048528 chrX 4048582 4048654 23 125 7.5 9.0 8.2 2.5 198 chrX 4048456 3` UTR CR45482 - chrX 4048555 3` UTR CR45482 - chrX 4048654 3` UTR CR45482 - chrX_23_4045001 chrX_4045001 RAL-913 4816 chrX 4079578 4079586 chrX 4079707 4079715 4 129 14.0 10.0 12.0 0.3 137 chrX 4079578 intron CG43689 + chrX 4079646 intron CG43689 + chrX 4079715 intron CG43689 + chrX_4_4075001 chrX_4075001 RAL-913 4817 chrX 4091373 4091440 chrX 4091507 4091563 32 133 10.0 8.5 9.2 3.1 190 chrX 4091373 3` UTR CG43689 + chrX 4091468 3` UTR CG43689 + chrX 4091563 3` UTR CG43689 + chrX_32_4090001 chrX_4090001 RAL-913 4818 chrX 4101823 4101891 chrX 4101952 4102021 12 129 6.5 12.0 9.2 1.2 198 chrX 4101823 exon CG15375 + chrX 4101922 exon CG15375 + chrX 4102021 exon CG15375 + chrX_12_4100001 chrX_4100001 RAL-913 4819 chrX 4157847 4157915 chrX 4164950 4165018 297 27 7102 5.0 4.5 4.8 4.7 7171 chrX 4157847 intron Fas2 - chrX 4161432 intron Fas2 - chrX 4165018 intron Fas2 - chrX_27_4160001 chrX_4160001 RAL-913 4820 chrX 4212669 4212689 chrX 4212802 4212822 5 133 6.5 10.0 8.2 0.5 153 chrX 4212669 intergenic CG43288 + chrX 4212746 intergenic CG43288 + chrX 4212822 intergenic CG43288 + chrX_5_4210001 chrX_4210001 RAL-913 4821 chrX 4235711 4235738 chrX 4235874 4235914 8 175 10.5 13.0 11.8 0.6 203 chrX 4235711 intergenic not near genes chrX 4235812 intergenic not near genes chrX 4235914 intergenic not near genes chrX_8_4235001 chrX_4235001 RAL-913 4822 chrX 4324341 4324411 chrX 4324468 4324538 42 126 6.5 8.5 7.5 4.9 197 chrX 4324341 intron norpA + chrX 4324440 intron norpA + chrX 4324538 intron norpA + chrX_42_4320001 chrX_4320001 RAL-913 4823 chrX 4358050 4358080 chrX 4358202 4358232 10 152 11.0 0.0 5.5 1.5 182 chrX 4358050 intron norpA + chrX 4358141 intron norpA + chrX 4358232 intron norpA + chrX_10_4355001 chrX_4355001 RAL-913 4824 chrX 4361400 4361426 chrX 4361528 4361555 7 129 14.0 1.5 7.8 0.8 155 chrX 4361400 intron norpA + chrX 4361478 intron norpA + chrX 4361555 intron norpA + chrX_7_4360001 chrX_4360001 RAL-913 4825 chrX 4365387 4365467 chrX 4365587 4365668 10 201 8.0 3.0 5.5 1.5 281 chrX 4365387 3` UTR norpA + chrX 4365528 intergenic norpA +,mir-982 - chrX 4365668 intergenic mir-982 -,norpA + chrX_10_4365001 chrX_4365001 RAL-913 4826 chrX 4396929 4397011 chrX 4397064 4397078 30 129 6.0 9.5 7.8 3.4 149 chrX 4396929 intron CR32773 - chrX 4397004 intron CR32773 - chrX 4397078 intron CR32773 - chrX_30_4395001 chrX_4395001 RAL-913 4827 chrX 4409090 4409159 chrX 4409225 4409294 26 134 8.0 5.0 6.5 3.5 204 chrX 4409090 intron CR32773 - chrX 4409192 intron CR32773 - chrX 4409294 intron CR32773 - chrX_26_4405001 chrX_4405001 RAL-913 4828 chrX 4436459 4436495 chrX 4436592 4436628 14 125 4.0 8.5 6.2 1.9 169 chrX 4436459 intron,intron CR32773 -,bi + chrX 4436544 intron,intron CR32773 -,bi + chrX 4436628 intron,intron CR32773 -,bi + chrX_14_4435001 chrX_4435001 RAL-913 4829 chrX 4574849 4574900 chrX 4574989 4575041 16 140 5.5 4.0 4.8 2.8 192 chrX 4574849 intron CR32773 - chrX 4574945 intron CR32773 - chrX 4575041 intron CR32773 - chrX_16_4570001 chrX_4570001 RAL-913 4830 chrX 4575567 4575637 chrX 4575706 4575776 28 137 0.0 9.5 4.8 4.8 209 chrX 4575567 intron CR32773 - chrX 4575672 intron CR32773 - chrX 4575776 intron CR32773 - chrX_28_4575001 chrX_4575001 RAL-913 4831 chrX 4613524 4613569 chrX 4613644 4613709 15 132 9.5 11.5 10.5 1.3 185 chrX 4613524 intergenic not near genes chrX 4613616 intergenic not near genes chrX 4613709 intergenic not near genes chrX_15_4610001 chrX_4610001 RAL-913 4832 chrX 4699463 4699501 chrX 4699604 4699642 20 139 9.5 8.0 8.8 2.0 179 chrX 4699463 3` UTR ctp + chrX 4699552 3` UTR ctp + chrX 4699642 3` UTR ctp + chrX_20_4695001 chrX_4695001 RAL-913 4833 chrX 4700352 4700417 chrX 4700745 4700810 jockey 23 392 4.5 8.5 6.5 3.1 458 chrX 4700352 3` UTR ctp + chrX 4700581 3` UTR ctp + chrX 4700810 3` UTR ctp + chrX_23_4700001 chrX_4700001 RAL-913 4834 chrX 4710034 4710105 chrX 4710194 4710265 24 158 6.0 9.0 7.5 2.8 231 chrX 4710034 intron Proc-R + chrX 4710150 intron Proc-R + chrX 4710265 intron Proc-R + chrX_24_4710001 chrX_4710001 RAL-913 4835 chrX 4731775 4731782 chrX 4736918 4736925 jockey 4 5143 23.0 6.5 14.8 0.3 5150 chrX 4731775 intergenic not near genes chrX 4734350 intergenic not near genes chrX 4736925 intergenic not near genes chrX_4_4730001 chrX_4730001 RAL-913 4836 chrX 4744750 4744823 chrX 4744885 4744958 10 135 5.0 8.5 6.8 1.3 208 chrX 4744750 intergenic not near genes chrX 4744854 intergenic not near genes chrX 4744958 intergenic not near genes chrX_10_4740001 chrX_4740001 RAL-913 4837 chrX 4759343 4759402 chrX 4759471 4759528 19 125 9.0 9.0 9.0 1.9 185 chrX 4759343 intergenic not near genes chrX 4759436 intergenic not near genes chrX 4759528 intergenic not near genes chrX_19_4755001 chrX_4755001 RAL-913 4838 chrX 4763219 4763274 chrX 4763757 4763812 Stalker4 17 536 10.5 14.0 12.2 1.3 593 chrX 4763219 intergenic not near genes chrX 4763516 intergenic not near genes chrX 4763812 intergenic not near genes chrX_17_4760001 chrX_4760001 RAL-913 4839 chrX 4792355 4792399 chrX 4792817 4792867 jockey 14 480 7.0 11.0 9.0 1.4 512 chrX 4792355 intergenic not near genes chrX 4792611 intergenic not near genes chrX 4792867 intergenic not near genes chrX_14_4790001 chrX_4790001 RAL-913 4840 chrX 4827938 4827992 chrX 4835353 4835408 Stalker4 20 7414 10.0 7.0 8.5 2.1 7470 chrX 4827938 intergenic not near genes chrX 4831673 intergenic not near genes chrX 4835408 intergenic not near genes chrX_20_4830001 chrX_4830001 RAL-913 4841 chrX 4885727 4885804 chrX 4885870 4885891 22 132 5.0 6.5 5.8 3.2 164 chrX 4885727 intron CG42594 + chrX 4885809 intron CG42594 + chrX 4885891 intron CG42594 + chrX_22_4885001 chrX_4885001 RAL-913 4842 chrX 4989998 4990067 chrX 4997262 4997331 roo 28 7264 10.0 7.5 8.8 2.9 7333 chrX 4989998 intron CR44833 - chrX 4993664 intron CR44833 - chrX 4997331 intron CR44833 - chrX_28_4990001 chrX_4990001 RAL-913 4843 chrX 5002014 5002053 chrX 5002150 5002189 11 135 12.0 5.0 8.5 1.2 175 chrX 5002014 intron CR44833 - chrX 5002102 intron CR44833 - chrX 5002189 intron CR44833 - chrX_11_5000001 chrX_5000001 RAL-913 4844 chrX 5096239 5096299 chrX 5103854 5103914 springer 20 7614 4.0 7.0 5.5 3.1 7675 chrX 5096239 intron,intron CG15465 +,rg + chrX 5100076 intron,intron CG15465 +,rg + chrX 5103914 intron,intron CG15465 +,rg + chrX_20_5100001 chrX_5100001 RAL-913 4845 chrX 5159780 5159858 chrX 5160410 5160488 20 632 56.5 39.0 47.8 0.4 708 chrX 5159780 intron,intron CG15465 +,rg + chrX 5160134 intron,intron CG15465 +,rg + chrX 5160488 intron,intron CG15465 +,rg + chrX_20_5160001 chrX_5160001 RAL-913 4846 chrX 5168869 5168874 chrX 5168995 5169011 4 132 9.5 9.0 9.2 0.4 142 chrX 5168869 intron,intron CG15465 +,rg + chrX 5168940 intron,intron CG15465 +,rg + chrX 5169011 intron,intron CG15465 +,rg + chrX_4_5165001 chrX_5165001 RAL-913 4847 chrX 5220341 5220405 chrX 5220632 5220654 7 283 8.5 6.0 7.2 0.9 313 chrX 5220341 intron,intron CG15465 +,rg + chrX 5220498 intron,intron CG15465 +,rg + chrX 5220654 intron,intron CG15465 +,rg + chrX_7_5220001 chrX_5220001 RAL-913 4848 chrX 5291483 5291728 chrX 5291605 5291854 15 126 9.5 14.5 12.0 1.2 371 chrX 5291483 intergenic not near genes chrX 5291668 intergenic not near genes chrX 5291854 intergenic not near genes chrX_15_5290001 chrX_5290001 RAL-913 4849 chrX 5338681 5338735 chrX 5339968 5340026 jockey 10 1290 5.5 1.5 3.5 2.2 1345 chrX 5338681 intergenic not near genes chrX 5339354 intergenic not near genes chrX 5340026 intergenic SK + chrX_10_5335001 chrX_5335001 RAL-913 4850 chrX 5345400 5345457 chrX 5345562 5345619 12 162 6.0 3.0 4.5 2.2 219 chrX 5345400 intron SK + chrX 5345510 intron SK + chrX 5345619 intron SK + chrX_12_5345001 chrX_5345001 RAL-913 4851 chrX 5354010 5354030 chrX 5354154 5354174 4 144 1.5 13.0 7.2 0.5 164 chrX 5354010 intron SK + chrX 5354092 intron SK + chrX 5354174 intron SK + chrX_4_5350001 chrX_5350001 RAL-913 4852 chrX 5441949 5441958 chrX 5442107 5442116 4 158 12.0 4.5 8.2 0.4 167 chrX 5441949 intergenic not near genes chrX 5442032 intergenic not near genes chrX 5442116 intergenic not near genes chrX_4_5440001 chrX_5440001 RAL-913 4853 chrX 5441979 5442017 chrX 5442098 5442175 9 142 7.0 4.5 5.8 1.3 196 chrX 5441979 intergenic not near genes chrX 5442077 intergenic not near genes chrX 5442175 intergenic not near genes chrX_9_5440001 chrX_5440001 RAL-913 4854 chrX 5481072 5481080 chrX 5485082 5485090 I-element 6 4010 0.0 4.5 2.2 1.9 4018 chrX 5481072 intron SPR + chrX 5483081 intron SPR + chrX 5485090 intron SPR + chrX_6_5480001 chrX_5480001 RAL-913 4855 chrX 5524804 5524834 chrX 5528717 5528722 412 11 3910 6.0 4.5 5.2 1.8 3918 chrX 5524804 intergenic snoRNA:Psi28S-3342 - chrX 5526763 intergenic not near genes chrX 5528722 intergenic Vsx2 - chrX_11_5525001 chrX_5525001 RAL-913 4856 chrX 5537666 5537686 chrX 5537799 5537819 roo 5 131 16.0 5.5 10.8 0.4 153 chrX 5537666 intron Vsx2 - chrX 5537742 intron Vsx2 - chrX 5537819 intron Vsx2 - chrX_5_5535001 chrX_5535001 RAL-913 4857 chrX 5592050 5592088 chrX 5592201 5592239 5 150 8.5 9.5 9.0 0.5 189 chrX 5592050 intergenic not near genes chrX 5592144 intergenic not near genes chrX 5592239 intergenic not near genes chrX_5_5590001 chrX_5590001 RAL-913 4858 chrX 5727373 5727412 chrX 5732162 5732201 Doc 15 4789 6.5 3.5 5.0 2.5 4828 chrX 5727373 intron CG32758 - chrX 5729787 intron CG32758 - chrX 5732201 intron CG32758 - chrX_15_5725001 chrX_5725001 RAL-913 4859 chrX 5798851 5798855 chrX 5799037 5799067 4 203 3.0 9.0 6.0 0.6 216 chrX 5798851 intergenic not near genes chrX 5798959 intergenic not near genes chrX 5799067 intergenic not near genes chrX_4_5795001 chrX_5795001 RAL-913 4860 chrX 5798858 5798888 chrX 5799023 5799100 14 204 0.5 6.0 3.2 3.3 242 chrX 5798858 intergenic not near genes chrX 5798979 intergenic not near genes chrX 5799100 intergenic not near genes chrX_14_5795001 chrX_5795001 RAL-913 4861 chrX 5831909 5831929 chrX 5833301 5833311 7 1383 24.5 30.0 27.2 0.2 1402 chrX 5831909 intron,3` UTR CG15765 +,CR43264 - chrX 5832610 intron CG15765 + chrX 5833311 intron CG15765 + chrX_7_5830001 chrX_5830001 RAL-913 4862 chrX 5883765 5883777 chrX 5884056 5884068 pogo 4 291 16.5 8.0 12.2 0.3 303 chrX 5883765 intron CR45668 - chrX 5883916 intron CR45668 - chrX 5884068 intron CR45668 - chrX_4_5880001 chrX_5880001 RAL-913 4863 chrX 5883779 5883834 chrX 5884055 5884125 pogo 16 290 7.0 8.0 7.5 1.9 346 chrX 5883779 intron CR45668 - chrX 5883952 intron CR45668 - chrX 5884125 intron CR45668 - chrX_16_5880001 chrX_5880001 RAL-913 4864 chrX 5884118 5884186 chrX 5884409 5884477 pogo 25 289 7.0 10.0 8.5 2.6 359 chrX 5884118 intron CR45668 - chrX 5884298 intron CR45668 - chrX 5884477 intron CR45668 - chrX_25_5880001 chrX_5880001 RAL-913 4865 chrX 5953737 5953767 chrX 5953911 5953923 8 166 16.0 13.0 14.5 0.5 186 chrX 5953737 exon CG6048 + chrX 5953830 exon CG6048 + chrX 5953923 exon CG6048 + chrX_8_5950001 chrX_5950001 RAL-913 4866 chrX 6056409 6056459 chrX 6056536 6056586 18 126 11.0 14.0 12.5 1.3 177 chrX 6056409 intron CG5921 + chrX 6056498 intron CG5921 + chrX 6056586 intron CG5921 + chrX_18_6055001 chrX_6055001 RAL-913 4867 chrX 6093265 6093320 chrX 6093394 6093449 26 126 7.0 6.0 6.5 3.5 184 chrX 6093265 intron Nep1 + chrX 6093357 intron Nep1 + chrX 6093449 intron Nep1 + chrX_26_6090001 chrX_6090001 RAL-913 4868 chrX 6171544 6171605 chrX 6179027 6179088 Quasimodo 15 7483 10.5 11.5 11.0 1.2 7544 chrX 6171544 intron Ca-alpha1T - chrX 6175316 intron Ca-alpha1T - chrX 6179088 intron Ca-alpha1T - chrX_15_6175001 chrX_6175001 RAL-913 4869 chrX 6197848 6197859 chrX 6201852 6201858 6 4005 8.0 22.5 15.2 0.4 4010 chrX 6197848 intron CG32751 - chrX 6199853 5` UTR CG43090 - chrX 6201858 exon vanin-like - chrX_6_6195001 chrX_6195001 RAL-913 4870 chrX 6198763 6198817 chrX 6198902 6198956 27 137 7.0 9.5 8.2 2.9 193 chrX 6198763 intergenic CG32751 -,CG43090 - chrX 6198860 intergenic CG32751 -,CG43090 - chrX 6198956 intergenic CG43090 -,CG32751 - chrX_27_6195001 chrX_6195001 RAL-913 4871 chrX 6215195 6215490 chrX 6215323 6215615 9 128 15.0 12.0 13.5 0.6 420 chrX 6215195 intergenic not near genes chrX 6215405 intergenic not near genes chrX 6215615 intergenic not near genes chrX_9_6215001 chrX_6215001 RAL-913 4872 chrX 6215494 6215521 chrX 6215625 6215637 9 129 9.0 12.5 10.8 0.8 143 chrX 6215494 intergenic not near genes chrX 6215566 intergenic not near genes chrX 6215637 intergenic not near genes chrX_9_6215001 chrX_6215001 RAL-913 4873 chrX 6335219 6335240 chrX 6337779 6337800 Tirant 10 2560 0.0 19.0 9.5 1.0 2581 chrX 6335219 intergenic not near genes chrX 6336510 intergenic not near genes chrX 6337800 5` UTR CG3842 + chrX_10_6335001 chrX_6335001 RAL-913 4874 chrX 6388620 6388694 chrX 6388746 6388820 25 125 9.5 7.0 8.2 2.7 200 chrX 6388620 intergenic not near genes chrX 6388720 intergenic not near genes chrX 6388820 intergenic not near genes chrX_25_6385001 chrX_6385001 RAL-913 4875 chrX 6407247 6407256 chrX 6407590 6407644 5 379 1.5 7.0 4.2 1.0 397 chrX 6407247 intergenic not near genes chrX 6407446 intergenic not near genes chrX 6407644 intergenic not near genes chrX_5_6405001 chrX_6405001 RAL-913 4876 chrX 6445262 6445333 chrX 6451070 6451141 297 7 5808 8.0 8.0 8.0 0.8 5879 chrX 6445262 intron CG42340 - chrX 6448202 intron CG42340 - chrX 6451141 intron CG42340 - chrX_7_6445001 chrX_6445001 RAL-913 4877 chrX 6487930 6487982 chrX 6488062 6488114 15 131 8.0 12.0 10.0 1.4 184 chrX 6487930 intron CG42340 - chrX 6488022 intron CG42340 - chrX 6488114 intron CG42340 - chrX_15_6485001 chrX_6485001 RAL-913 4878 chrX 6499116 6499156 chrX 6499243 6499283 15 127 8.0 6.5 7.2 1.8 167 chrX 6499116 intron CG42340 - chrX 6499200 intron CG42340 - chrX 6499283 intron CG42340 - chrX_15_6495001 chrX_6495001 RAL-913 4879 chrX 6562774 6562846 chrX 6571306 6571378 Tirant 37 8528 8.0 13.0 10.5 3.2 8604 chrX 6562774 intron CG34417 + chrX 6567076 intron CG34417 + chrX 6571378 intron CG34417 + chrX_37_6565001 chrX_6565001 RAL-913 4880 chrX 6591809 6591851 chrX 6591944 6591986 13 135 7.5 0.0 3.8 2.7 177 chrX 6591809 intron Pat1 + chrX 6591898 intron Pat1 + chrX 6591986 intron Pat1 + chrX_13_6590001 chrX_6590001 RAL-913 4881 chrX 6592016 6592087 chrX 6592262 6592335 20 244 0.0 5.5 2.8 5.3 319 chrX 6592016 intron Pat1 + chrX 6592176 intron Pat1 + chrX 6592335 intron Pat1 + chrX_20_6590001 chrX_6590001 RAL-913 4882 chrX 6605442 6605496 chrX 6608514 6608568 Burdock 17 3072 8.0 10.0 9.0 1.7 3126 chrX 6605442 intron pigs + chrX 6607005 intron pigs + chrX 6608568 intron pigs + chrX_17_6605001 chrX_6605001 RAL-913 4883 chrX 6618423 6618474 chrX 6618551 6618602 17 128 11.5 14.0 12.8 1.2 179 chrX 6618423 intron pigs + chrX 6618512 intron pigs + chrX 6618602 intron pigs + chrX_17_6615001 chrX_6615001 RAL-913 4884 chrX 6629736 6629792 chrX 6629873 6629929 30 137 7.5 4.0 5.8 4.4 193 chrX 6629736 intron pigs + chrX 6629832 intron pigs + chrX 6629929 intron pigs + chrX_30_6625001 chrX_6625001 RAL-913 4885 chrX 6737478 6737551 chrX 6737610 6737620 12 123 8.0 7.0 7.5 1.4 142 chrX 6737478 intron CG3168 - chrX 6737549 intron CG3168 - chrX 6737620 intron CG3168 - chrX_12_6735001 chrX_6735001 RAL-913 4886 chrX 6792044 6792091 chrX 6792185 6792232 5 141 7.0 8.0 7.5 0.6 188 chrX 6792044 intron C3G - chrX 6792138 intron C3G - chrX 6792232 intron C3G - chrX_5_6790001 chrX_6790001 RAL-913 4887 chrX 6814228 6814301 chrX 6814365 6814428 5 135 0.0 3.5 1.8 1.8 200 chrX 6814228 exon iav + chrX 6814328 intron iav + chrX 6814428 intron iav + chrX_5_6810001 chrX_6810001 RAL-913 4888 chrX 6865740 6865790 chrX 6865871 6865924 19 132 7.5 6.5 7.0 2.4 184 chrX 6865740 intron CG14434 - chrX 6865832 intron CG14434 - chrX 6865924 intron CG14434 - chrX_19_6865001 chrX_6865001 RAL-913 4889 chrX 6897564 6897573 chrX 6897692 6897701 8 128 0.5 0.0 0.2 6.7 137 chrX 6897564 intergenic not near genes chrX 6897632 intergenic not near genes chrX 6897701 intergenic not near genes chrX_8_6895001 chrX_6895001 RAL-913 4890 chrX 6897574 6897580 chrX 7243820 7243824 4 346246 0.5 14.0 7.2 0.5 346250 chrX 6897574 intergenic not near genes chrX 7070699 exon CG4607 + chrX 7243824 intron CR44357 - chrX_4_7070001 chrX_7070001 RAL-913 4891 chrX 6897645 6897675 chrX 6897805 6897835 16 160 0.0 7.5 3.8 3.3 190 chrX 6897645 intergenic not near genes chrX 6897740 intergenic not near genes chrX 6897835 intergenic not near genes chrX_16_6895001 chrX_6895001 RAL-913 4892 chrX 6897682 6897710 chrX 6897802 6897870 8 154 0.0 7.5 3.8 1.7 188 chrX 6897682 intergenic not near genes chrX 6897776 intergenic not near genes chrX 6897870 intergenic not near genes chrX_8_6895001 chrX_6895001 RAL-913 4893 chrX 6901329 6901376 chrX 6901454 6901502 10 126 6.5 10.5 8.5 1.1 173 chrX 6901329 intergenic not near genes chrX 6901416 intergenic not near genes chrX 6901502 intergenic not near genes chrX_10_6900001 chrX_6900001 RAL-913 4894 chrX 6988494 6988526 chrX 6988629 6988661 11 134 10.0 8.0 9.0 1.1 167 chrX 6988494 intron ogre - chrX 6988578 intron ogre - chrX 6988661 intron ogre - chrX_11_6985001 chrX_6985001 RAL-913 4895 chrX 6989471 6989533 chrX 6989608 6989652 21 133 5.0 9.0 7.0 2.6 181 chrX 6989471 intron ogre - chrX 6989562 intron ogre - chrX 6989652 intron ogre - chrX_21_6985001 chrX_6985001 RAL-913 4896 chrX 7023558 7023634 chrX 7030998 7031054 Tabor 28 7437 6.0 7.5 6.8 3.6 7496 chrX 7023558 intron CG12541 - chrX 7027306 intron CG12541 - chrX 7031054 intron CG12541 - chrX_28_7025001 chrX_7025001 RAL-913 4897 chrX 7125223 7125262 chrX 7134432 7134471 roo 12 9209 0.5 10.5 5.5 1.8 9248 chrX 7125223 intergenic not near genes chrX 7129847 intergenic not near genes chrX 7134471 intergenic not near genes chrX_12_7125001 chrX_7125001 RAL-913 4898 chrX 7322857 7322923 chrX 7322991 7323057 37 132 7.0 7.5 7.2 4.5 200 chrX 7322857 intron,intron,intron CR44357 -,CG1677 -,Atg5 - chrX 7322957 intron,intron,intron CR44357 -,CG1677 -,Atg5 - chrX 7323057 intron,intron,intron CR44357 -,CG1677 -,Atg5 - chrX_37_7320001 chrX_7320001 RAL-913 4899 chrX 7345154 7345214 chrX 7345296 7345356 13 141 7.5 11.0 9.2 1.3 202 chrX 7345154 intron,intron CR44357 -,CG1677 - chrX 7345255 intron,intron CR44357 -,CG1677 - chrX 7345356 intron,intron CR44357 -,CG1677 - chrX_13_7345001 chrX_7345001 RAL-913 4900 chrX 7350536 7350590 chrX 7350670 7350725 17 131 8.0 7.0 7.5 2.0 189 chrX 7350536 intron,intron CR44357 -,CG1677 - chrX 7350630 intron,intron CR44357 -,CG1677 - chrX 7350725 intron,intron CR44357 -,CG1677 - chrX_17_7350001 chrX_7350001 RAL-913 4901 chrX 7367640 7367696 chrX 7367768 7367824 5 128 0.0 5.5 2.8 1.3 184 chrX 7367640 intron,intron CR44357 -,CG1677 - chrX 7367732 intron,intron CR44357 -,CG1677 - chrX 7367824 intron,intron CR44357 -,CG1677 - chrX_5_7365001 chrX_7365001 RAL-913 4902 chrX 7376941 7376949 chrX 7377073 7377081 4 132 7.0 6.5 6.8 0.5 140 chrX 7376941 intron,intron CR44357 -,CG1677 - chrX 7377011 intron,intron CR44357 -,CG1677 - chrX 7377081 intron,intron CR44357 -,CG1677 - chrX_4_7375001 chrX_7375001 RAL-913 4903 chrX 7470177 7470222 chrX 7470315 7470360 14 138 4.0 8.5 6.2 1.9 183 chrX 7470177 intergenic not near genes chrX 7470268 intergenic not near genes chrX 7470360 intergenic not near genes chrX_14_7470001 chrX_7470001 RAL-913 4904 chrX 7480785 7480791 chrX 7482348 7482354 jockey 4 1563 11.5 16.0 13.8 0.3 1569 chrX 7480785 intergenic not near genes chrX 7481570 intergenic not near genes chrX 7482354 intergenic not near genes chrX_4_7480001 chrX_7480001 RAL-913 4905 chrX 7552202 7552273 chrX 7552326 7552400 21 127 5.5 5.0 5.2 3.4 198 chrX 7552202 intergenic not near genes chrX 7552301 intergenic not near genes chrX 7552400 intergenic not near genes chrX_21_7550001 chrX_7550001 RAL-913 4906 chrX 7605326 7605349 chrX 7605452 7605475 5 126 0.0 7.0 3.5 1.1 149 chrX 7605326 intergenic not near genes chrX 7605400 intergenic not near genes chrX 7605475 intergenic not near genes chrX_5_7605001 chrX_7605001 RAL-913 4907 chrX 7702870 7702924 chrX 7703359 7703413 jockey 20 489 8.0 7.5 7.8 2.3 543 chrX 7702870 intron CHES-1-like - chrX 7703142 intron CHES-1-like - chrX 7703413 intron CHES-1-like - chrX_20_7700001 chrX_7700001 RAL-913 4908 chrX 7720531 7720534 chrX 7720657 7720664 4 130 10.0 0.0 5.0 0.7 133 chrX 7720531 intergenic not near genes chrX 7720598 intergenic not near genes chrX 7720664 intergenic not near genes chrX_4_7720001 chrX_7720001 RAL-913 4909 chrX 7720535 7720570 chrX 7720656 7720702 13 128 7.0 0.0 3.5 2.9 167 chrX 7720535 intergenic not near genes chrX 7720618 intergenic not near genes chrX 7720702 intergenic not near genes chrX_13_7720001 chrX_7720001 RAL-913 4910 chrX 7845681 7845702 chrX 7847222 7847243 hopper2 7 1540 11.0 8.0 9.5 0.7 1562 chrX 7845681 intergenic not near genes chrX 7846462 intergenic not near genes chrX 7847243 intergenic not near genes chrX_7_7845001 chrX_7845001 RAL-913 4911 chrX 7845705 7845756 chrX 7847220 7847269 hopper2 21 1538 4.5 7.5 6.0 3.0 1564 chrX 7845705 intergenic not near genes chrX 7846487 intergenic not near genes chrX 7847269 intergenic not near genes chrX_21_7845001 chrX_7845001 RAL-913 4912 chrX 7960831 7960898 chrX 7960970 7961037 31 137 8.0 5.0 6.5 4.1 206 chrX 7960831 intron,5` UTR sws -,CR45620 + chrX 7960934 intron sws - chrX 7961037 intron sws - chrX_31_7960001 chrX_7960001 RAL-913 4913 chrX 7968471 7968500 chrX 7968649 7968678 11 178 19.0 9.5 14.2 0.7 207 chrX 7968471 intron sn + chrX 7968574 intron sn + chrX 7968678 intron sn + chrX_11_7965001 chrX_7965001 RAL-913 4914 chrX 8031402 8031446 chrX 8035761 8035805 Juan 18 4359 6.0 10.5 8.2 2.0 4403 chrX 8031402 intergenic not near genes chrX 8033604 intergenic not near genes chrX 8035805 3` UTR CG2233 - chrX_18_8030001 chrX_8030001 RAL-913 4915 chrX 8038864 8038886 chrX 8038996 8039018 11 132 7.5 0.5 4.0 2.2 154 chrX 8038864 3` UTR fs(1)h - chrX 8038941 3` UTR fs(1)h - chrX 8039018 3` UTR fs(1)h - chrX_11_8035001 chrX_8035001 RAL-913 4916 chrX 8083507 8083531 chrX 8083634 8083658 8 126 12.5 13.5 13.0 0.6 151 chrX 8083507 intergenic not near genes chrX 8083582 intergenic CG2256 - chrX 8083658 intergenic CG2256 - chrX_8_8080001 chrX_8080001 RAL-913 4917 chrX 8085525 8085600 chrX 8085661 8085736 33 136 4.0 4.5 4.2 6.3 211 chrX 8085525 intron,5` UTR CG2256 -,CR45535 + chrX 8085630 intron,5` UTR CG2256 -,CR45535 + chrX 8085736 intron,5` UTR CG2256 -,CR45535 + chrX_33_8085001 chrX_8085001 RAL-913 4918 chrX 8092248 8092320 chrX 8092383 8092455 23 135 8.5 6.5 7.5 2.7 207 chrX 8092248 intron Ubc-E2H - chrX 8092352 intron Ubc-E2H - chrX 8092455 intron Ubc-E2H - chrX_23_8090001 chrX_8090001 RAL-913 4919 chrX 8305149 8305182 chrX 8305280 8305313 12 129 10.5 6.5 8.5 1.3 164 chrX 8305149 intron nAChRalpha3 - chrX 8305231 intron nAChRalpha3 - chrX 8305313 intron nAChRalpha3 - chrX_12_8305001 chrX_8305001 RAL-913 4920 chrX 8305183 8305188 chrX 8305279 8305304 6 116 9.5 6.0 7.8 0.7 121 chrX 8305183 intron nAChRalpha3 - chrX 8305244 intron nAChRalpha3 - chrX 8305304 intron nAChRalpha3 - chrX_6_8305001 chrX_8305001 RAL-913 4921 chrX 8305189 8305213 chrX 8305273 8305339 7 115 3.5 6.0 4.8 1.2 150 chrX 8305189 intron nAChRalpha3 - chrX 8305264 intron nAChRalpha3 - chrX 8305339 intron nAChRalpha3 - chrX_7_8305001 chrX_8305001 RAL-913 4922 chrX 8314083 8314143 chrX 8314407 8314467 4 324 25.5 24.5 25.0 0.2 384 chrX 8314083 intron nAChRalpha3 - chrX 8314275 intron nAChRalpha3 - chrX 8314467 intron nAChRalpha3 - chrX_4_8310001 chrX_8310001 RAL-913 4923 chrX 8327242 8327270 chrX 8327371 8327399 12 129 8.0 9.0 8.5 1.3 157 chrX 8327242 intron nAChRalpha3 - chrX 8327320 intron nAChRalpha3 - chrX 8327399 intron nAChRalpha3 - chrX_12_8325001 chrX_8325001 RAL-913 4924 chrX 8364801 8364869 chrX 8365248 8365266 BS 22 444 5.0 6.0 5.5 3.4 465 chrX 8364801 intron nAChRalpha3 - chrX 8365034 intron nAChRalpha3 - chrX 8365266 intron nAChRalpha3 - chrX_22_8365001 chrX_8365001 RAL-913 4925 chrX 8371105 8371181 chrX 8371314 8371385 13 204 5.5 2.0 3.8 2.7 280 chrX 8371105 intergenic not near genes chrX 8371245 intergenic not near genes chrX 8371385 intergenic not near genes chrX_13_8370001 chrX_8370001 RAL-913 4926 chrX 8668243 8668286 chrX 8668374 8668417 19 128 6.5 14.0 10.2 1.7 174 chrX 8668243 intergenic not near genes chrX 8668330 intergenic not near genes chrX 8668417 intergenic not near genes chrX_19_8665001 chrX_8665001 RAL-913 4927 chrX 8743226 8743261 chrX 8743354 8743389 11 127 1.5 11.5 6.5 1.5 163 chrX 8743226 intergenic not near genes chrX 8743308 intergenic not near genes chrX 8743389 intergenic not near genes chrX_11_8740001 chrX_8740001 RAL-913 4928 chrX 8772201 8772251 chrX 8772330 8772372 12 124 9.5 12.5 11.0 1.0 171 chrX 8772201 intron Lim1 - chrX 8772286 intron Lim1 - chrX 8772372 intron Lim1 - chrX_12_8770001 chrX_8770001 RAL-913 4929 chrX 8810799 8810799 chrX 12946235 12946235 4 4135436 27.0 24.0 25.5 0.2 4135436 chrX 8810799 intergenic not near genes chrX 10878517 exon Ork1 - chrX 12946235 3` UTR fne + chrX_4_10875001 chrX_10875001 RAL-913 4930 chrX 8860775 8860793 chrX 8860909 8860927 7 134 0.0 9.0 4.5 1.3 152 chrX 8860775 intron CG12075 + chrX 8860851 intron CG12075 + chrX 8860927 intron CG12075 + chrX_7_8860001 chrX_8860001 RAL-913 4931 chrX 8894951 8894981 chrX 8895083 8895113 12 132 0.5 13.5 7.0 1.5 162 chrX 8894951 intron Moe - chrX 8895032 intron Moe - chrX 8895113 intron Moe - chrX_12_8895001 chrX_8895001 RAL-913 4932 chrX 8922285 8922351 chrX 8922769 8922835 jockey 23 484 11.5 9.0 10.2 2.1 550 chrX 8922285 intron rdgA + chrX 8922560 intron rdgA + chrX 8922835 intron rdgA + chrX_23_8920001 chrX_8920001 RAL-913 4933 chrX 8948707 8948786 chrX 8956267 8956346 roo 13 7558 7.0 5.5 6.2 1.8 7639 chrX 8948707 intron rdgA + chrX 8952526 intron rdgA + chrX 8956346 intron rdgA + chrX_13_8950001 chrX_8950001 RAL-913 4934 chrX 8971839 8971899 chrX 8971968 8972028 22 128 9.5 6.5 8.0 2.4 189 chrX 8971839 intron rdgA + chrX 8971934 intron rdgA + chrX 8972028 intron rdgA + chrX_22_8970001 chrX_8970001 RAL-913 4935 chrX 9008321 9008376 chrX 9008514 9008569 21 193 11.5 6.5 9.0 2.1 248 chrX 9008321 intron,intron rdgA +,CR43836 - chrX 9008445 intron,intron rdgA +,CR43836 - chrX 9008569 intron,intron rdgA +,CR43836 - chrX_21_9005001 chrX_9005001 RAL-913 4936 chrX 9041989 9042021 chrX 9042156 9042189 9 168 0.5 8.5 4.5 1.6 200 chrX 9041989 intron,intron CR43836 -,CG42388 + chrX 9042089 intron,intron CR43836 -,CG42388 + chrX 9042189 intron,intron CR43836 -,CG42388 + chrX_9_9040001 chrX_9040001 RAL-913 4937 chrX 9062683 9062704 chrX 9062811 9062832 8 128 1.5 0.0 0.8 4.4 149 chrX 9062683 intron CG15365 - chrX 9062758 intron CG15365 - chrX 9062832 intron CG15365 - chrX_8_9060001 chrX_9060001 RAL-913 4938 chrX 9062708 9062730 chrX 9062801 9062858 9 122 1.0 0.5 0.8 5.0 150 chrX 9062708 intron CG15365 - chrX 9062783 intron CG15365 - chrX 9062858 intron CG15365 - chrX_9_9060001 chrX_9060001 RAL-913 4939 chrX 9187970 9188018 chrX 9188097 9188145 20 127 12.5 13.0 12.8 1.4 175 chrX 9187970 3` UTR mei-P26 + chrX 9188058 3` UTR mei-P26 + chrX 9188145 3` UTR mei-P26 + chrX_20_9185001 chrX_9185001 RAL-913 4940 chrX 9190743 9190783 chrX 9190884 9190916 12 141 12.0 14.5 13.2 0.8 173 chrX 9190743 intergenic CG12115 - chrX 9190830 intergenic CG12115 - chrX 9190916 intergenic CG12115 - chrX_12_9190001 chrX_9190001 RAL-913 4941 chrX 9229862 9229930 chrX 9229992 9230060 22 130 6.5 9.0 7.8 2.5 198 chrX 9229862 intron CG12121 - chrX 9229961 intron CG12121 - chrX 9230060 intron CG12121 - chrX_22_9225001 chrX_9225001 RAL-913 4942 chrX 9272968 9273045 chrX 9273099 9273176 31 131 4.5 3.0 3.8 6.5 208 chrX 9272968 intergenic Cfp1 -,CG16892 + chrX 9273072 intergenic Cfp1 -,CG16892 + chrX 9273176 intergenic Cfp1 -,CG16892 + chrX_31_9270001 chrX_9270001 RAL-913 4943 chrX 9289672 9289710 chrX 9289805 9289843 10 127 4.0 10.0 7.0 1.2 171 chrX 9289672 intron lz + chrX 9289758 intron lz + chrX 9289843 intron lz + chrX_10_9285001 chrX_9285001 RAL-913 4944 chrX 9337899 9337969 chrX 9338036 9338111 19 136 6.0 9.0 7.5 2.2 212 chrX 9337899 intron CG34449 - chrX 9338005 intron CG34449 - chrX 9338111 exon CG34449 - chrX_19_9335001 chrX_9335001 RAL-913 4945 chrX 9377789 9377857 chrX 9377918 9377986 18 127 4.0 7.5 5.8 2.6 197 chrX 9377789 intron mgl - chrX 9377888 intron mgl - chrX 9377986 intron mgl - chrX_18_9375001 chrX_9375001 RAL-913 4946 chrX 9503211 9503211 chrX 22383088 22383378 19 12880134 31.0 124.5 77.8 0.2 12880167 chrX 9503211 3` UTR CG32700 - chrX 15943294 intron CG8924 + chrX 22383378 intergenic not near genes chrX_19_15940001 chrX_15940001 RAL-913 4947 chrX 9508097 9508151 chrX 9509665 9509719 jockey 22 1566 8.0 11.0 9.5 2.1 1622 chrX 9508097 intron CG32700 - chrX 9508908 intron CG32700 - chrX 9509719 intron CG32700 - chrX_22_9505001 chrX_9505001 RAL-913 4948 chrX 9531612 9531654 chrX 9531742 9531784 13 129 12.5 0.0 6.2 1.8 172 chrX 9531612 intron CG32700 - chrX 9531698 intron CG32700 - chrX 9531784 intron CG32700 - chrX_13_9530001 chrX_9530001 RAL-913 4949 chrX 9575748 9575813 chrX 9576117 9576187 mdg3 23 373 8.0 4.0 6.0 3.3 439 chrX 9575748 intron,exon CG32699 -,CG42395 - chrX 9575968 intron,intron CG32699 -,CG42395 - chrX 9576187 intron,5` UTR CG32699 -,CG42395 - chrX_23_9575001 chrX_9575001 RAL-913 4950 chrX 9616963 9616967 chrX 9617092 9617096 4 129 16.0 0.0 8.0 0.4 133 chrX 9616963 intron CG42797 + chrX 9617030 intron CG42797 + chrX 9617096 intron CG42797 + chrX_4_9615001 chrX_9615001 RAL-913 4951 chrX 9732330 9732345 chrX 9732456 9732471 9 126 8.0 5.5 6.8 1.2 141 chrX 9732330 intron Sp1 + chrX 9732400 intron Sp1 + chrX 9732471 intron Sp1 + chrX_9_9730001 chrX_9730001 RAL-913 4952 chrX 9758002 9758045 chrX 9758137 9758180 15 135 15.0 0.0 7.5 1.8 178 chrX 9758002 intergenic not near genes chrX 9758091 intergenic not near genes chrX 9758180 intergenic not near genes chrX_15_9755001 chrX_9755001 RAL-913 4953 chrX 9784135 9784162 chrX 9784373 9784400 9 238 11.5 5.5 8.5 0.9 265 chrX 9784135 intron CG32698 + chrX 9784268 intron CG32698 + chrX 9784400 intron CG32698 + chrX_9_9780001 chrX_9780001 RAL-913 4954 chrX 9784167 9784195 chrX 9784358 9784423 11 227 9.0 4.0 6.5 1.5 256 chrX 9784167 intron CG32698 + chrX 9784295 intron CG32698 + chrX 9784423 intron CG32698 + chrX_11_9780001 chrX_9780001 RAL-913 4955 chrX 9791815 9791891 chrX 9791964 9792038 12 148 5.5 5.0 5.2 1.9 223 chrX 9791815 intron CG32698 + chrX 9791926 intron CG32698 + chrX 9792038 intron CG32698 + chrX_12_9790001 chrX_9790001 RAL-913 4956 chrX 9839299 9839365 chrX 9839432 9839482 13 132 0.0 4.0 2.0 4.3 183 chrX 9839299 intron CG32698 + chrX 9839390 intron CG32698 + chrX 9839482 intron CG32698 + chrX_13_9835001 chrX_9835001 RAL-913 4957 chrX 9949134 9949180 chrX 9949308 9949374 12 183 8.5 0.0 4.2 2.3 240 chrX 9949134 intergenic not near genes chrX 9949254 intergenic not near genes chrX 9949374 intergenic not near genes chrX_12_9945001 chrX_9945001 RAL-913 4958 chrX 9988472 9988516 chrX 9988626 9988670 19 154 11.5 3.0 7.2 2.3 198 chrX 9988472 intergenic not near genes chrX 9988571 intergenic not near genes chrX 9988670 intergenic not near genes chrX_19_9985001 chrX_9985001 RAL-913 4959 chrX 10138173 10138242 chrX 10145727 10145796 412 30 7554 5.5 5.0 5.2 4.8 7623 chrX 10138173 intron,intron RhoU +,CR44894 - chrX 10141984 intron,intron RhoU +,CR44894 - chrX 10145796 intron,intron RhoU +,CR44894 - chrX_30_10140001 chrX_10140001 RAL-913 4960 chrX 10149967 10150036 chrX 10150240 10150278 14 266 5.0 4.0 4.5 2.5 311 chrX 10149967 intron CR44894 - chrX 10150122 intron CR44894 - chrX 10150278 intron CR44894 - chrX_14_10150001 chrX_10150001 RAL-913 4961 chrX 10216801 10216813 chrX 10216932 10216942 6 130 16.0 6.5 11.2 0.5 141 chrX 10216801 3` UTR l(1)G0230 + chrX 10216872 3` UTR l(1)G0230 + chrX 10216942 3` UTR l(1)G0230 + chrX_6_10215001 chrX_10215001 RAL-913 4962 chrX 10216819 10216823 chrX 10216930 10216942 6 124 14.5 6.5 10.5 0.5 123 chrX 10216819 3` UTR l(1)G0230 + chrX 10216880 3` UTR l(1)G0230 + chrX 10216942 3` UTR l(1)G0230 + chrX_6_10215001 chrX_10215001 RAL-913 4963 chrX 10216824 10216843 chrX 10216929 10216974 7 122 11.5 7.0 9.2 0.7 150 chrX 10216824 3` UTR l(1)G0230 + chrX 10216899 3` UTR l(1)G0230 + chrX 10216974 3` UTR l(1)G0230 + chrX_7_10215001 chrX_10215001 RAL-913 4964 chrX 10267307 10267326 chrX 10276507 10276525 roo 6 9200 0.0 18.0 9.0 0.6 9218 chrX 10267307 3` UTR alpha-Man-I - chrX 10271916 intron alpha-Man-I - chrX 10276525 3` UTR alpha-Man-I - chrX_6_10270001 chrX_10270001 RAL-913 4965 chrX 10317508 10317580 chrX 10317636 10317708 23 128 1.0 7.5 4.2 4.4 200 chrX 10317508 intron alpha-Man-I - chrX 10317608 intron alpha-Man-I - chrX 10317708 intron alpha-Man-I - chrX_23_10315001 chrX_10315001 RAL-913 4966 chrX 10348752 10348813 chrX 10356367 10356428 springer 21 7615 11.0 9.0 10.0 1.9 7676 chrX 10348752 intergenic snoRNA:U3:9B + chrX 10352590 intergenic not near genes chrX 10356428 intergenic l(1)G0289 - chrX_21_10350001 chrX_10350001 RAL-913 4967 chrX 10367147 10367203 chrX 10367302 10367362 21 153 5.5 10.0 7.8 2.4 215 chrX 10367147 exon CG32679 - chrX 10367254 intron CG32679 - chrX 10367362 exon CG32679 - chrX_21_10365001 chrX_10365001 RAL-913 4968 chrX 10446634 10446700 chrX 10446766 10446832 15 130 9.5 8.0 8.8 1.5 198 chrX 10446634 intron CG32683 - chrX 10446733 intron CG32683 - chrX 10446832 intron CG32683 - chrX_15_10445001 chrX_10445001 RAL-913 4969 chrX 10453031 10453097 chrX 10453272 10453338 25 241 3.0 8.5 5.8 3.7 307 chrX 10453031 intron CG32683 - chrX 10453184 intron CG32683 - chrX 10453338 intron CG32683 - chrX_25_10450001 chrX_10450001 RAL-913 4970 chrX 10550818 10550882 chrX 10552335 10552392 hobo 23 1515 6.5 7.5 7.0 2.9 1574 chrX 10550818 intron spri - chrX 10551605 intron spri - chrX 10552392 intron spri - chrX_23_10550001 chrX_10550001 RAL-913 4971 chrX 10686010 10686076 chrX 10691197 10691263 roo 18 5187 8.0 8.5 8.2 2.0 5253 chrX 10686010 intron X11Lbeta + chrX 10688636 intron X11Lbeta + chrX 10691263 intron X11Lbeta + chrX_18_10685001 chrX_10685001 RAL-913 4972 chrX 10772630 10772691 chrX 10772763 10772801 18 127 5.5 5.5 5.5 2.8 171 chrX 10772630 intron CG15211 + chrX 10772716 intron CG15211 + chrX 10772801 intron CG15211 + chrX_18_10770001 chrX_10770001 RAL-913 4973 chrX 10802990 10803044 chrX 10803125 10803179 15 135 12.0 10.0 11.0 1.2 189 chrX 10802990 intron Imp - chrX 10803084 intron Imp - chrX 10803179 intron Imp - chrX_15_10800001 chrX_10800001 RAL-913 4974 chrX 10933889 10933938 chrX 10934026 10934076 13 136 1.0 6.5 3.8 2.7 187 chrX 10933889 intron Myo10A + chrX 10933982 intron Myo10A + chrX 10934076 intron Myo10A + chrX_13_10930001 chrX_10930001 RAL-913 4975 chrX 10937638 10937703 chrX 10937828 10937893 17 190 10.0 7.0 8.5 1.8 255 chrX 10937638 intron Myo10A + chrX 10937766 intron Myo10A + chrX 10937893 intron Myo10A + chrX_17_10935001 chrX_10935001 RAL-913 4976 chrX 10939363 10939432 chrX 10939516 10939587 27 154 0.0 9.5 4.8 4.7 224 chrX 10939363 intron Myo10A + chrX 10939475 intron Myo10A + chrX 10939587 intron Myo10A + chrX_27_10935001 chrX_10935001 RAL-913 4977 chrX 11016442 11016457 chrX 11016630 11016645 5 188 10.0 14.5 12.2 0.4 203 chrX 11016442 intron CG42339 - chrX 11016544 intron CG42339 - chrX 11016645 intron CG42339 - chrX_5_11015001 chrX_11015001 RAL-913 4978 chrX 11062401 11062470 chrX 11062546 11062615 19 145 12.0 7.5 9.8 1.8 214 chrX 11062401 exon CG1537 - chrX 11062508 intron CG1537 - chrX 11062615 intron CG1537 - chrX_19_11060001 chrX_11060001 RAL-913 4979 chrX 11069120 11069152 chrX 11069313 11069345 16 193 14.0 6.0 10.0 1.5 225 chrX 11069120 intergenic not near genes chrX 11069232 intergenic not near genes chrX 11069345 intergenic not near genes chrX_16_11065001 chrX_11065001 RAL-913 4980 chrX 11095956 11096020 chrX 11103108 11103172 HMS-Beagle 32 7152 9.0 11.0 10.0 2.9 7216 chrX 11095956 intergenic not near genes chrX 11099564 intergenic not near genes chrX 11103172 intron CG42249 + chrX_32_11095001 chrX_11095001 RAL-913 4981 chrX 11133940 11133970 chrX 11134475 11134504 10 534 56.0 53.0 54.5 0.2 564 chrX 11133940 intron Klp10A - chrX 11134222 intron Klp10A - chrX 11134504 intron Klp10A - chrX_10_11130001 chrX_11130001 RAL-913 4982 chrX 11133931 11134008 chrX 11134505 11134542 10 540 65.0 52.5 58.8 0.2 611 chrX 11133931 intron Klp10A - chrX 11134236 intron Klp10A - chrX 11134542 intron Klp10A - chrX_10_11130001 chrX_11130001 RAL-913 4983 chrX 11142001 11142064 chrX 11142150 11142190 13 140 0.0 5.0 2.5 3.7 189 chrX 11142001 intergenic CG15199 - chrX 11142096 intergenic CG15199 -,CG15202 + chrX 11142190 intergenic CG15202 +,CG15199 - chrX_13_11140001 chrX_11140001 RAL-913 4984 chrX 11165830 11165900 chrX 11166212 11166282 8 382 6.0 8.5 7.2 1.0 452 chrX 11165830 intergenic not near genes chrX 11166056 intergenic not near genes chrX 11166282 intergenic not near genes chrX_8_11165001 chrX_11165001 RAL-913 4985 chrX 11184198 11184257 chrX 11189327 11189386 flea 20 5128 7.0 8.5 7.8 2.3 5188 chrX 11184198 intergenic not near genes chrX 11186792 intergenic not near genes chrX 11189386 intergenic not near genes chrX_20_11185001 chrX_11185001 RAL-913 4986 chrX 11191849 11191918 chrX 11191977 11192046 22 128 6.5 8.0 7.2 2.7 197 chrX 11191849 intergenic not near genes chrX 11191948 intergenic not near genes chrX 11192046 intergenic not near genes chrX_22_11190001 chrX_11190001 RAL-913 4987 chrX 11205265 11205311 chrX 11205391 11205437 12 126 8.0 7.0 7.5 1.4 172 chrX 11205265 intergenic not near genes chrX 11205351 intergenic not near genes chrX 11205437 intergenic not near genes chrX_12_11205001 chrX_11205001 RAL-913 4988 chrX 11256044 11256113 chrX 11256678 11256747 16 628 3.5 7.5 5.5 2.5 703 chrX 11256044 intron CG44422 - chrX 11256396 intron CG44422 - chrX 11256747 intron CG44422 - chrX_16_11255001 chrX_11255001 RAL-913 4989 chrX 11273876 11273928 chrX 11274154 11274196 11 281 7.5 8.5 8.0 1.2 320 chrX 11273876 intron CG44422 - chrX 11274036 intron CG44422 - chrX 11274196 intron CG44422 - chrX_11_11270001 chrX_11270001 RAL-913 4990 chrX 11291645 11291666 chrX 11291772 11291798 5 131 19.0 6.0 12.5 0.4 153 chrX 11291645 intron CG44422 - chrX 11291722 intron CG44422 - chrX 11291798 intron CG44422 - chrX_5_11290001 chrX_11290001 RAL-913 4991 chrX 11291668 11291720 chrX 11291768 11291792 5 110 9.5 7.0 8.2 0.5 124 chrX 11291668 intron CG44422 - chrX 11291730 intron CG44422 - chrX 11291792 intron CG44422 - chrX_5_11290001 chrX_11290001 RAL-913 4992 chrX 11292953 11292967 chrX 11293079 11293093 4 126 11.0 3.5 7.2 0.5 140 chrX 11292953 intron CG44422 - chrX 11293023 intron CG44422 - chrX 11293093 intron CG44422 - chrX_4_11290001 chrX_11290001 RAL-913 4993 chrX 11312030 11312081 chrX 11319413 11319479 Stalker2 19 7391 6.5 10.5 8.5 2.0 7449 chrX 11312030 intergenic not near genes chrX 11315754 intergenic not near genes chrX 11319479 intergenic not near genes chrX_19_11315001 chrX_11315001 RAL-913 4994 chrX 11409463 11409539 chrX 11409599 11409673 16 135 4.5 6.0 5.2 2.6 210 chrX 11409463 3` UTR dlg1 + chrX 11409568 3` UTR dlg1 + chrX 11409673 3` UTR dlg1 + chrX_16_11405001 chrX_11405001 RAL-913 4995 chrX 11495981 11496039 chrX 11496211 11496269 23 229 11.5 8.5 10.0 2.1 288 chrX 11495981 intron Drak + chrX 11496125 intron Drak + chrX 11496269 intron Drak + chrX_23_11495001 chrX_11495001 RAL-913 4996 chrX 11535001 11535045 chrX 11541520 11541565 Burdock 16 6519 8.5 11.0 9.8 1.5 6564 chrX 11535001 intron Drak + chrX 11538283 intron Drak + chrX 11541565 intron Drak + chrX_16_11535001 chrX_11535001 RAL-913 4997 chrX 11633374 11633436 chrX 11640478 11640539 297 20 7104 12.0 9.0 10.5 1.7 7165 chrX 11633374 intron Ptp10D + chrX 11636956 intron Ptp10D + chrX 11640539 intron Ptp10D + chrX_20_11635001 chrX_11635001 RAL-913 4998 chrX 11645078 11645117 chrX 11648297 11648336 NOF 18 3219 8.5 9.5 9.0 1.8 3258 chrX 11645078 intron Ptp10D + chrX 11646707 intron Ptp10D + chrX 11648336 intron Ptp10D + chrX_18_11645001 chrX_11645001 RAL-913 4999 chrX 11658645 11658678 chrX 11658772 11658805 9 127 5.0 10.5 7.8 1.0 160 chrX 11658645 intron Ptp10D + chrX 11658725 intron Ptp10D + chrX 11658805 intron Ptp10D + chrX_9_11655001 chrX_11655001 RAL-913 5000 chrX 11685692 11685735 chrX 11685830 11685876 17 137 11.0 14.5 12.8 1.2 184 chrX 11685692 intron bif + chrX 11685784 intron bif + chrX 11685876 intron bif + chrX_17_11685001 chrX_11685001 RAL-913 5001 chrX 11719831 11719890 chrX 11719961 11720020 23 130 8.5 10.0 9.2 2.3 189 chrX 11719831 3` UTR prtp + chrX 11719926 intergenic prtp +,Tango10 + chrX 11720020 intergenic prtp +,Tango10 + chrX_23_11715001 chrX_11715001 RAL-913 5002 chrX 11761972 11761998 chrX 11762101 11762121 14 125 5.0 7.0 6.0 2.0 149 chrX 11761972 intron m + chrX 11762046 intron m + chrX 11762121 intron m + chrX_14_11760001 chrX_11760001 RAL-913 5003 chrX 11798974 11799027 chrX 11799105 11799163 18 136 7.5 8.0 7.8 2.0 189 chrX 11798974 intron CkIIbeta + chrX 11799068 intron CkIIbeta + chrX 11799163 intron CkIIbeta + chrX_18_11795001 chrX_11795001 RAL-913 5004 chrX 11804623 11804689 chrX 11804777 11804843 25 154 6.0 7.0 6.5 3.3 220 chrX 11804623 intron Hsc70-3 - chrX 11804733 intron Hsc70-3 - chrX 11804843 intron Hsc70-3 - chrX_25_11800001 chrX_11800001 RAL-913 5005 chrX 11818365 11818434 chrX 11818506 11818575 33 141 9.5 7.0 8.2 3.6 210 chrX 11818365 intron rudhira + chrX 11818470 intron rudhira + chrX 11818575 intron rudhira + chrX_33_11815001 chrX_11815001 RAL-913 5006 chrX 11922314 11922377 chrX 11922497 11922560 19 183 4.0 4.5 4.2 3.7 246 chrX 11922314 exon Sclp - chrX 11922437 intron Sclp - chrX 11922560 intron Sclp - chrX_19_11920001 chrX_11920001 RAL-913 5007 chrX 11936551 11936589 chrX 11936700 11936725 8 147 0.0 10.5 5.2 1.3 174 chrX 11936551 intron cac - chrX 11936638 intron cac - chrX 11936725 exon cac - chrX_8_11935001 chrX_11935001 RAL-913 5008 chrX 12094016 12094059 chrX 12094158 12094201 9 139 5.0 9.0 7.0 1.1 185 chrX 12094016 intron,intron CR43960 +,Ten-a + chrX 12094108 intron,intron CR43960 +,Ten-a + chrX 12094201 intron,intron CR43960 +,Ten-a + chrX_9_12090001 chrX_12090001 RAL-913 5009 chrX 12136417 12136497 chrX 12136548 12136623 7 129 1.0 8.0 4.5 1.3 206 chrX 12136417 intron Ten-a + chrX 12136520 intron Ten-a + chrX 12136623 intron Ten-a + chrX_7_12135001 chrX_12135001 RAL-913 5010 chrX 12145535 12145553 chrX 12145663 12145679 6 128 7.5 1.0 4.2 1.2 144 chrX 12145535 intron Ten-a + chrX 12145607 intron Ten-a + chrX 12145679 intron Ten-a + chrX_6_12145001 chrX_12145001 RAL-913 5011 chrX 12168100 12168141 chrX 12173592 12173618 I-element 8 5488 10.5 4.5 7.5 0.9 5518 chrX 12168100 intron Ten-a + chrX 12170859 intron Ten-a + chrX 12173618 intron Ten-a + chrX_8_12170001 chrX_12170001 RAL-913 5012 chrX 12202730 12202788 chrX 12202864 12202922 12 134 6.5 10.0 8.2 1.3 192 chrX 12202730 intron Ten-a + chrX 12202826 intron Ten-a + chrX 12202922 intron Ten-a + chrX_12_12200001 chrX_12200001 RAL-913 5013 chrX 12246914 12246960 chrX 12247060 12247106 7 146 8.0 0.0 4.0 1.4 192 chrX 12246914 intron Ten-a + chrX 12247010 intron Ten-a + chrX 12247106 intron Ten-a + chrX_7_12245001 chrX_12245001 RAL-913 5014 chrX 12276545 12276607 chrX 12276665 12276734 4 125 5.5 8.0 6.8 0.5 189 chrX 12276545 exon Ten-a + chrX 12276640 intron Ten-a + chrX 12276734 intron Ten-a + chrX_4_12275001 chrX_12275001 RAL-913 5015 chrX 12375442 12375504 chrX 12375590 12375652 23 147 6.5 3.0 4.8 4.0 210 chrX 12375442 intergenic Ir11a - chrX 12375547 intergenic Ir11a - chrX 12375652 exon Ir11a - chrX_23_12375001 chrX_12375001 RAL-913 5016 chrX 12381808 12381895 chrX 12385771 12385847 flea 18 3962 0.0 8.0 4.0 3.6 4039 chrX 12381808 intergenic not near genes chrX 12383828 intergenic not near genes chrX 12385847 intergenic not near genes chrX_18_12380001 chrX_12380001 RAL-913 5017 chrX 12449815 12449843 chrX 12449966 12449994 15 151 14.5 2.5 8.5 1.6 179 chrX 12449815 intron Pkcdelta + chrX 12449904 intron Pkcdelta + chrX 12449994 intron Pkcdelta + chrX_15_12445001 chrX_12445001 RAL-913 5018 chrX 12465426 12465497 chrX 12465552 12465623 16 126 3.0 0.0 1.5 6.4 197 chrX 12465426 exon CG42258 + chrX 12465524 intron CG42258 + chrX 12465623 intron CG42258 + chrX_16_12465001 chrX_12465001 RAL-913 5019 chrX 12492949 12492961 chrX 13057292 13057304 9 564343 11.5 34.5 23.0 0.4 564355 chrX 12492949 3` UTR Lsp1alpha + chrX 12775126 3` UTR CG32647 - chrX 13057304 intron rad + chrX_9_12775001 chrX_12775001 RAL-913 5020 chrX 12511274 12511350 chrX 12511406 12511484 17 132 0.0 7.5 3.8 3.5 210 chrX 12511274 intron CG2556 + chrX 12511379 intron CG2556 + chrX 12511484 intron CG2556 + chrX_17_12510001 chrX_12510001 RAL-913 5021 chrX 12528814 12528890 chrX 12528940 12529016 11 126 8.0 8.5 8.2 1.2 202 chrX 12528814 intron CG43921 - chrX 12528915 intron CG43921 - chrX 12529016 intron CG43921 - chrX_11_12525001 chrX_12525001 RAL-913 5022 chrX 12532594 12532667 chrX 12532790 12532838 8 187 6.5 0.0 3.2 1.9 244 chrX 12532594 intron CG43921 - chrX 12532716 intron CG43921 - chrX 12532838 intron CG43921 - chrX_8_12530001 chrX_12530001 RAL-913 5023 chrX 12533770 12533783 chrX 12533882 12533910 6 124 0.0 7.5 3.8 1.2 140 chrX 12533770 intron CG43921 - chrX 12533840 intron CG43921 - chrX 12533910 intron CG43921 - chrX_6_12530001 chrX_12530001 RAL-913 5024 chrX 12557146 12557156 chrX 12557255 12557280 5 116 11.0 16.0 13.5 0.3 134 chrX 12557146 intron CG43921 - chrX 12557213 intron CG43921 - chrX 12557280 intron CG43921 - chrX_5_12555001 chrX_12555001 RAL-913 5025 chrX 12562092 12562165 chrX 12562269 12562342 21 177 7.0 8.0 7.5 2.5 250 chrX 12562092 intron CG43921 - chrX 12562217 intron CG43921 - chrX 12562342 intron CG43921 - chrX_21_12560001 chrX_12560001 RAL-913 5026 chrX 12635401 12635429 chrX 12635536 12635564 12 134 7.5 8.0 7.8 1.4 163 chrX 12635401 intron Tomosyn + chrX 12635482 intron Tomosyn + chrX 12635564 intron Tomosyn + chrX_12_12635001 chrX_12635001 RAL-913 5027 chrX 12646852 12646884 chrX 12647007 12647039 15 155 9.0 11.5 10.2 1.3 187 chrX 12646852 intron Tomosyn + chrX 12646946 intron Tomosyn + chrX 12647039 intron Tomosyn + chrX_15_12645001 chrX_12645001 RAL-913 5028 chrX 5190132 5190148 chrX 12649913 12649914 6 7459775 17.0 27.5 22.2 0.3 7459782 chrX 5190132 intron,intron CG15465 +,rg + chrX 8920023 intron,3` UTR rdgA +,CR44111 - chrX 12649914 intron Tomosyn + chrX_6_8920001 chrX_8920001 RAL-913 5029 chrX 12754655 12754678 chrX 12754893 12754916 4 238 9.0 13.5 11.2 0.3 261 chrX 12754655 intergenic CR44619 + chrX 12754786 intergenic CR44619 + chrX 12754916 intergenic CR44619 + chrX_4_12750001 chrX_12750001 RAL-913 5030 chrX 12808430 12808477 chrX 12808572 12808618 10 141 7.5 7.5 7.5 1.2 188 chrX 12808430 intron Pde9 - chrX 12808524 intron Pde9 - chrX 12808618 intron Pde9 - chrX_10_12805001 chrX_12805001 RAL-913 5031 chrX 12834808 12834846 chrX 12834960 12834993 8 151 12.5 12.5 12.5 0.6 185 chrX 12834808 intron Pde9 - chrX 12834900 intron Pde9 - chrX 12834993 intron Pde9 - chrX_8_12830001 chrX_12830001 RAL-913 5032 chrX 12930546 12930605 chrX 12937712 12937736 HMS-Beagle 19 7164 8.0 13.0 10.5 1.7 7190 chrX 12930546 intron fne + chrX 12934141 intron fne + chrX 12937736 intron fne + chrX_19_12930001 chrX_12930001 RAL-913 5033 chrX 11109417 11109417 chrX 12946233 12946233 4 1836816 30.0 24.0 27.0 0.1 1836816 chrX 11109417 intron Hsp60 + chrX 12027825 exon Usp7 - chrX 12946233 3` UTR fne + chrX_4_12025001 chrX_12025001 RAL-913 5034 chrX 12946234 12946234 chrX 18572525 18572527 4 5626292 28.0 36.0 32.0 0.1 5626293 chrX 12946234 3` UTR fne + chrX 15759380 intron Graf - chrX 18572527 intergenic not near genes chrX_4_15755001 chrX_15755001 RAL-913 5035 chrX 13048589 13048620 chrX 13048733 13048765 12 142 5.5 12.0 8.8 1.2 176 chrX 13048589 intron rad + chrX 13048677 intron rad + chrX 13048765 intron rad + chrX_12_13045001 chrX_13045001 RAL-913 5036 chrX 13099104 13099138 chrX 13099247 13099281 7 143 0.0 14.0 7.0 0.9 177 chrX 13099104 intron CG43313 - chrX 13099192 intron CG43313 - chrX 13099281 intron CG43313 - chrX_7_13095001 chrX_13095001 RAL-913 5037 chrX 13146552 13146623 chrX 13146690 13146761 36 138 9.0 7.0 8.0 4.0 209 chrX 13146552 intron CG32645 + chrX 13146656 intron CG32645 + chrX 13146761 intron CG32645 + chrX_36_13145001 chrX_13145001 RAL-913 5038 chrX 13172302 13172370 chrX 13172428 13172489 14 124 8.5 7.5 8.0 1.6 187 chrX 13172302 intron CG34411 - chrX 13172396 intron CG34411 - chrX 13172489 intron CG34411 - chrX_14_13170001 chrX_13170001 RAL-913 5039 chrX 13236828 13236901 chrX 13236960 13237036 13 133 0.5 10.0 5.2 2.1 208 chrX 13236828 intron mew - chrX 13236932 intron mew - chrX 13237036 intron mew - chrX_13_13235001 chrX_13235001 RAL-913 5040 chrX 13269185 13269188 chrX 13269311 13269314 4 126 0.0 2.0 1.0 2.0 129 chrX 13269185 intron HDAC4 - chrX 13269250 intron HDAC4 - chrX 13269314 intron HDAC4 - chrX_4_13265001 chrX_13265001 RAL-913 5041 chrX 13278110 13278184 chrX 13278243 13278317 17 133 8.0 6.0 7.0 2.1 207 chrX 13278110 intron HDAC4 - chrX 13278214 intron HDAC4 - chrX 13278317 intron HDAC4 - chrX_17_13275001 chrX_13275001 RAL-913 5042 chrX 13321426 13321464 chrX 13321566 13321587 6 144 9.5 5.5 7.5 0.7 161 chrX 13321426 intron IP3K2 + chrX 13321506 intron IP3K2 + chrX 13321587 intron IP3K2 + chrX_6_13320001 chrX_13320001 RAL-913 5043 chrX 13342416 13342438 chrX 13342553 13342575 9 137 7.5 0.0 3.8 1.9 159 chrX 13342416 intergenic not near genes chrX 13342496 intergenic not near genes chrX 13342575 intergenic not near genes chrX_9_13340001 chrX_13340001 RAL-913 5044 chrX 13347001 13347037 chrX 13347158 13347194 6 157 0.5 9.0 4.8 1.0 193 chrX 13347001 intergenic not near genes chrX 13347098 intergenic not near genes chrX 13347194 intergenic not near genes chrX_6_13345001 chrX_13345001 RAL-913 5045 chrX 13353832 13353859 chrX 13354020 13354047 6 182 0.5 5.0 2.8 1.6 215 chrX 13353832 intergenic not near genes chrX 13353940 intergenic not near genes chrX 13354047 intergenic not near genes chrX_6_13350001 chrX_13350001 RAL-913 5046 chrX 13353864 13353893 chrX 13354019 13354081 6 181 0.0 5.0 2.5 1.7 217 chrX 13353864 intergenic not near genes chrX 13353972 intergenic not near genes chrX 13354081 intergenic not near genes chrX_6_13350001 chrX_13350001 RAL-913 5047 chrX 13354903 13354924 chrX 13355030 13355046 5 126 9.0 0.0 4.5 0.9 143 chrX 13354903 intergenic not near genes chrX 13354974 intergenic not near genes chrX 13355046 intergenic not near genes chrX_5_13350001 chrX_13350001 RAL-913 5048 chrX 13374798 13374864 chrX 13374924 13374993 18 129 5.0 6.0 5.5 2.8 195 chrX 13374798 intron CG1640 + chrX 13374896 intron CG1640 + chrX 13374993 intron CG1640 + chrX_18_13370001 chrX_13370001 RAL-913 5049 chrX 13401443 13401511 chrX 13401845 13401913 jockey 26 402 8.0 7.0 7.5 3.1 470 chrX 13401443 intergenic CG1673 +,CG12725 - chrX 13401678 intergenic CG12725 -,CG1673 + chrX 13401913 3` UTR CG12725 - chrX_26_13400001 chrX_13400001 RAL-913 5050 chrX 13429410 13429485 chrX 13430609 13430672 jockey 13 1198 0.0 7.0 3.5 2.9 1262 chrX 13429410 intergenic not near genes chrX 13430041 intergenic not near genes chrX 13430672 intergenic not near genes chrX_13_13430001 chrX_13430001 RAL-913 5051 chrX 13463602 13463667 chrX 13469229 13469294 mdg3 21 5626 7.5 12.0 9.8 1.9 5692 chrX 13463602 intron Neto + chrX 13466448 intron Neto + chrX 13469294 intron Neto + chrX_21_13465001 chrX_13465001 RAL-913 5052 chrX 13574900 13574941 chrX 13575036 13575037 19 135 8.0 12.0 10.0 1.7 137 chrX 13574900 intron Tango13 + chrX 13574968 intron Tango13 + chrX 13575037 intron Tango13 + chrX_19_13570001 chrX_13570001 RAL-913 5053 chrX 13577713 13577781 chrX 13577998 13578067 13 281 6.0 5.5 5.8 1.9 354 chrX 13577713 intron Tango13 + chrX 13577890 intron Tango13 + chrX 13578067 intron Tango13 + chrX_13_13575001 chrX_13575001 RAL-913 5054 chrX 13875915 13875990 chrX 13876044 13876146 7 140 6.0 0.0 3.0 1.8 231 chrX 13875915 intron mamo - chrX 13876030 intron mamo - chrX 13876146 intron mamo - chrX_7_13875001 chrX_13875001 RAL-913 5055 chrX 13908747 13908794 chrX 13908875 13908896 8 116 9.5 10.0 9.8 0.7 149 chrX 13908747 intron mamo - chrX 13908822 intron mamo - chrX 13908896 intron mamo - chrX_8_13905001 chrX_13905001 RAL-913 5056 chrX 13916681 13916714 chrX 13916808 13916841 11 125 7.5 6.5 7.0 1.4 160 chrX 13916681 intron mamo - chrX 13916761 intron mamo - chrX 13916841 intron mamo - chrX_11_13915001 chrX_13915001 RAL-913 5057 chrX 13937947 13938008 chrX 13941268 13941329 I-element 13 3320 4.0 11.0 7.5 1.5 3382 chrX 13937947 intron mamo - chrX 13939638 intron mamo - chrX 13941329 intron mamo - chrX_13_13935001 chrX_13935001 RAL-913 5058 chrX 14030700 14030723 chrX 14035337 14035360 copia 7 4637 15.0 9.5 12.2 0.5 4660 chrX 14030700 intergenic not near genes chrX 14033030 intergenic not near genes chrX 14035360 intergenic not near genes chrX_7_14030001 chrX_14030001 RAL-913 5059 chrX 14064136 14064172 chrX 14064283 14064319 6 147 0.0 3.5 1.8 2.1 183 chrX 14064136 intergenic not near genes chrX 14064228 intergenic not near genes chrX 14064319 intergenic not near genes chrX_6_14060001 chrX_14060001 RAL-913 5060 chrX 14104983 14105048 chrX 14114184 14114249 roo 26 9199 5.0 10.5 7.8 3.0 9266 chrX 14104983 intergenic not near genes chrX 14109616 intergenic not near genes chrX 14114249 5` UTR CR44657 + chrX_26_14105001 chrX_14105001 RAL-913 5061 chrX 14157551 14157559 chrX 14163258 14163266 297 6 5707 16.5 10.0 13.2 0.4 5715 chrX 14157551 intergenic not near genes chrX 14160408 intergenic not near genes chrX 14163266 intergenic not near genes chrX_6_14160001 chrX_14160001 RAL-913 5062 chrX 14157560 14157617 chrX 14163257 14163324 297 10 5706 8.0 9.5 8.8 1.0 5764 chrX 14157560 intergenic not near genes chrX 14160442 intergenic not near genes chrX 14163324 intergenic not near genes chrX_10_14160001 chrX_14160001 RAL-913 5063 chrX 14167361 14167429 chrX 14167506 14167574 14 145 5.0 8.0 6.5 1.9 213 chrX 14167361 intergenic not near genes chrX 14167468 intergenic not near genes chrX 14167574 intergenic not near genes chrX_14_14165001 chrX_14165001 RAL-913 5064 chrX 14209420 14209490 chrX 14209560 14209631 28 141 5.5 7.0 6.2 3.9 211 chrX 14209420 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209526 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209631 intron,intron l(1)G0007 +,l(1)G0469 - chrX_28_14205001 chrX_14205001 RAL-913 5065 chrX 14254318 14254385 chrX 14254449 14254518 19 130 4.0 7.5 5.8 2.8 200 chrX 14254318 intron mud + chrX 14254418 intron mud + chrX 14254518 intron mud + chrX_19_14250001 chrX_14250001 RAL-913 5066 chrX 14304044 14304061 chrX 14310312 14310329 17.6 5 6268 12.0 10.0 11.0 0.4 6285 chrX 14304044 intergenic not near genes chrX 14307186 intergenic not near genes chrX 14310329 intergenic not near genes chrX_5_14305001 chrX_14305001 RAL-913 5067 chrX 14401505 14401572 chrX 14401664 14401730 19 158 5.0 6.0 5.5 2.9 225 chrX 14401505 intron dpr8 + chrX 14401618 intron dpr8 + chrX 14401730 intron dpr8 + chrX_19_14400001 chrX_14400001 RAL-913 5068 chrX 14404972 14405028 chrX 14405100 14405156 18 126 9.5 6.0 7.8 2.0 184 chrX 14404972 intron dpr8 + chrX 14405064 intron dpr8 + chrX 14405156 intron dpr8 + chrX_18_14405001 chrX_14405001 RAL-913 5069 chrX 14411967 14411987 chrX 14412098 14412102 7 129 5.5 11.5 8.5 0.7 135 chrX 14411967 intron dpr8 + chrX 14412034 intron dpr8 + chrX 14412102 intron dpr8 + chrX_7_14410001 chrX_14410001 RAL-913 5070 chrX 14416268 14416320 chrX 14421086 14421138 F-element 20 4816 9.5 11.5 10.5 1.7 4870 chrX 14416268 intron dpr8 + chrX 14418703 intron dpr8 + chrX 14421138 intron dpr8 + chrX_20_14415001 chrX_14415001 RAL-913 5071 chrX 14484922 14484986 chrX 14485060 14485125 18 137 0.0 4.0 2.0 6.0 203 chrX 14484922 intergenic not near genes chrX 14485024 intergenic not near genes chrX 14485125 intergenic not near genes chrX_18_14485001 chrX_14485001 RAL-913 5072 chrX 14593752 14593823 chrX 14593884 14593955 20 132 3.0 8.0 5.5 3.1 203 chrX 14593752 intron CG9413 - chrX 14593854 intron CG9413 - chrX 14593955 intron CG9413 - chrX_20_14590001 chrX_14590001 RAL-913 5073 chrX 14636420 14636483 chrX 14641911 14641969 I-element 11 5489 6.5 5.5 6.0 1.6 5549 chrX 14636420 intron NetA - chrX 14639194 intron NetA - chrX 14641969 intron NetA - chrX_11_14635001 chrX_14635001 RAL-913 5074 chrX 14713999 14714063 chrX 14714126 14714195 18 132 6.5 7.5 7.0 2.2 196 chrX 14713999 intron NetB - chrX 14714097 intron NetB - chrX 14714195 intron NetB - chrX_18_14710001 chrX_14710001 RAL-913 5075 chrX 14777992 14778045 chrX 14782839 14782892 Doc 25 4847 10.0 16.0 13.0 1.8 4900 chrX 14777992 intergenic CG5347 + chrX 14780442 intergenic not near genes chrX 14782892 intergenic Ag5r2 - chrX_25_14780001 chrX_14780001 RAL-913 5076 chrX 14813686 14813760 chrX 14813814 14813888 23 126 5.5 3.5 4.5 4.2 202 chrX 14813686 intron rut - chrX 14813787 intron rut - chrX 14813888 intron rut - chrX_23_14810001 chrX_14810001 RAL-913 5077 chrX 14818717 14818790 chrX 14823971 14824039 copia 25 5250 9.0 9.0 9.0 2.5 5322 chrX 14818717 intron rut - chrX 14821378 intron rut - chrX 14824039 intron rut - chrX_25_14820001 chrX_14820001 RAL-913 5078 chrX 14883566 14883623 chrX 14883692 14883749 10 126 5.0 6.5 5.8 1.5 183 chrX 14883566 intron Flo2 + chrX 14883658 intron Flo2 + chrX 14883749 intron Flo2 + chrX_10_14880001 chrX_14880001 RAL-913 5079 chrX 14888905 14888960 chrX 14889041 14889096 25 136 12.0 6.0 9.0 2.5 191 chrX 14888905 intron,intron Flo2 +,CG9514 - chrX 14889000 intron,intron Flo2 +,CG9514 - chrX 14889096 intron,intron Flo2 +,CG9514 - chrX_25_14885001 chrX_14885001 RAL-913 5080 chrX 14936819 14936882 chrX 14946126 14946189 roo 25 9307 6.0 6.0 6.0 3.6 9370 chrX 14936819 intron pdgy - chrX 14941504 intron pdgy - chrX 14946189 intron pdgy - chrX_25_14940001 chrX_14940001 RAL-913 5081 chrX 14950025 14950081 chrX 14950152 14950208 5 127 8.5 0.0 4.2 1.0 183 chrX 14950025 intron pdgy - chrX 14950116 intron pdgy - chrX 14950208 intron pdgy - chrX_5_14950001 chrX_14950001 RAL-913 5082 chrX 14952387 14952461 chrX 14952605 14952679 28 218 9.0 7.5 8.2 3.0 292 chrX 14952387 intron,3` UTR pdgy -,CR44831 - chrX 14952533 intron,3` UTR pdgy -,CR44831 - chrX 14952679 intron,3` UTR pdgy -,CR44831 - chrX_28_14950001 chrX_14950001 RAL-913 5083 chrX 14977391 14977456 chrX 14977538 14977608 15 143 4.0 5.0 4.5 2.7 217 chrX 14977391 intron eag + chrX 14977500 intron eag + chrX 14977608 intron eag + chrX_15_14975001 chrX_14975001 RAL-913 5084 chrX 14981691 14981738 chrX 14981820 14981867 16 129 6.0 12.5 9.2 1.6 176 chrX 14981691 intron eag + chrX 14981779 intron eag + chrX 14981867 intron eag + chrX_16_14980001 chrX_14980001 RAL-913 5085 chrX 15034057 15034088 chrX 15041640 15041671 rover 12 7580 8.5 11.5 10.0 1.1 7614 chrX 15034057 intron,3` UTR hiw -,be + chrX 15037864 intron,intron hiw -,be + chrX 15041671 intron,3` UTR hiw -,be + chrX_12_15035001 chrX_15035001 RAL-913 5086 chrX 15059133 15059159 chrX 15059289 15059315 11 155 5.5 5.5 5.5 1.7 182 chrX 15059133 exon hiw - chrX 15059224 intron hiw - chrX 15059315 intron hiw - chrX_11_15055001 chrX_15055001 RAL-913 5087 chrX 15127190 15127239 chrX 15127332 15127381 24 142 4.5 8.5 6.5 3.2 191 chrX 15127190 intron drd + chrX 15127286 intron drd + chrX 15127381 intron drd + chrX_24_15125001 chrX_15125001 RAL-913 5088 chrX 15165000 15165011 chrX 15165129 15165140 5 129 4.5 6.5 5.5 0.8 140 chrX 15165000 intergenic not near genes chrX 15165070 intergenic not near genes chrX 15165140 intergenic not near genes chrX_5_15165001 chrX_15165001 RAL-913 5089 chrX 15225351 15225423 chrX 15225494 15225566 17 143 5.0 6.5 5.8 2.5 215 chrX 15225351 intergenic CR44430 + chrX 15225458 intergenic CR44430 + chrX 15225566 5` UTR CR44430 + chrX_17_15225001 chrX_15225001 RAL-913 5090 chrX 15247207 15247285 chrX 15247343 15247420 26 135 4.0 5.5 4.8 4.5 213 chrX 15247207 intergenic not near genes chrX 15247314 intergenic not near genes chrX 15247420 intergenic not near genes chrX_26_15245001 chrX_15245001 RAL-913 5091 chrX 15248222 15248253 chrX 15248343 15248379 10 124 8.5 7.5 8.0 1.1 157 chrX 15248222 intergenic not near genes chrX 15248300 intergenic not near genes chrX 15248379 intergenic not near genes chrX_10_15245001 chrX_15245001 RAL-913 5092 chrX 15265845 15265852 chrX 15265972 15265979 6 127 10.5 10.5 10.5 0.5 134 chrX 15265845 intergenic not near genes chrX 15265912 intergenic not near genes chrX 15265979 intergenic not near genes chrX_6_15265001 chrX_15265001 RAL-913 5093 chrX 15265858 15265864 chrX 15265968 15265982 4 120 9.5 10.5 10.0 0.4 124 chrX 15265858 intergenic not near genes chrX 15265920 intergenic not near genes chrX 15265982 intergenic not near genes chrX_4_15265001 chrX_15265001 RAL-913 5094 chrX 15273663 15273680 chrX 15274880 15274880 1360 5 1211 17.5 6.5 12.0 0.4 1217 chrX 15273663 intergenic not near genes chrX 15274272 intergenic not near genes chrX 15274880 intergenic not near genes chrX_5_15270001 chrX_15270001 RAL-913 5095 chrX 15273696 15273730 chrX 15274870 15274947 1360 15 1206 6.5 5.5 6.0 2.1 1251 chrX 15273696 intergenic not near genes chrX 15274322 intergenic not near genes chrX 15274947 intergenic not near genes chrX_15_15270001 chrX_15270001 RAL-913 5096 chrX 15277589 15277666 chrX 15277724 15277801 28 135 7.0 10.5 8.8 2.9 212 chrX 15277589 intergenic not near genes chrX 15277695 intergenic not near genes chrX 15277801 intergenic not near genes chrX_28_15275001 chrX_15275001 RAL-913 5097 chrX 15326688 15326716 chrX 15326936 15326964 I-element 9 247 0.0 8.0 4.0 1.8 276 chrX 15326688 3` UTR Top1 + chrX 15326826 3` UTR Top1 + chrX 15326964 3` UTR Top1 + chrX_9_15325001 chrX_15325001 RAL-913 5098 chrX 15369796 15369854 chrX 15369913 15369987 21 131 6.0 6.5 6.2 2.9 191 chrX 15369796 intron acj6 - chrX 15369892 intron acj6 - chrX 15369987 intron acj6 - chrX_21_15365001 chrX_15365001 RAL-913 5099 chrX 15413013 15413026 chrX 15417365 15417378 Juan 7 4351 15.0 12.0 13.5 0.5 4365 chrX 15413013 intron Cngl - chrX 15415196 intron Cngl - chrX 15417378 intron Cngl - chrX_7_15415001 chrX_15415001 RAL-913 5100 chrX 15413029 15413072 chrX 15417356 15417424 Juan 17 4349 7.0 10.5 8.8 1.7 4395 chrX 15413029 intron Cngl - chrX 15415226 intron Cngl - chrX 15417424 intron Cngl - chrX_17_15415001 chrX_15415001 RAL-913 5101 chrX 15421870 15421943 chrX 15423431 15423504 pogo 18 1560 5.0 7.5 6.2 2.5 1634 chrX 15421870 intron Cngl - chrX 15422687 intron Cngl - chrX 15423504 intron Cngl - chrX_18_15420001 chrX_15420001 RAL-913 5102 chrX 15435687 15435695 chrX 15436170 15436178 rover 6 483 0.0 18.5 9.2 0.6 491 chrX 15435687 intron Cngl - chrX 15435932 intron Cngl - chrX 15436178 intron Cngl - chrX_6_15435001 chrX_15435001 RAL-913 5103 chrX 15443087 15443106 chrX 15443216 15443235 9 129 0.0 0.0 0.0 9.0 148 chrX 15443087 intergenic not near genes chrX 15443161 intergenic not near genes chrX 15443235 intergenic not near genes chrX_9_15440001 chrX_15440001 RAL-913 5104 chrX 15497547 15497617 chrX 15497687 15497753 27 136 6.0 3.5 4.8 4.7 206 chrX 15497547 intron,3` UTR Gmap +,CR44888 - chrX 15497650 intron,3` UTR Gmap +,CR44888 - chrX 15497753 intron,3` UTR Gmap +,CR44888 - chrX_27_15495001 chrX_15495001 RAL-913 5105 chrX 15536654 15536668 chrX 15536781 15536795 7 127 13.5 12.5 13.0 0.5 141 chrX 15536654 intron Ac13E - chrX 15536724 intron Ac13E - chrX 15536795 intron Ac13E - chrX_7_15535001 chrX_15535001 RAL-913 5106 chrX 15536670 15536701 chrX 15536779 15536828 11 125 11.0 13.5 12.2 0.8 158 chrX 15536670 intron Ac13E - chrX 15536749 intron Ac13E - chrX 15536828 intron Ac13E - chrX_11_15535001 chrX_15535001 RAL-913 5107 chrX 15645802 15645879 chrX 15645939 15645965 16 127 7.0 6.5 6.8 2.1 163 chrX 15645802 intergenic not near genes chrX 15645884 intergenic not near genes chrX 15645965 intergenic not near genes chrX_16_15645001 chrX_15645001 RAL-913 5108 chrX 15677990 15678065 chrX 15678118 15678192 18 125 4.0 6.5 5.2 2.9 202 chrX 15677990 intergenic CG12708 + chrX 15678091 intergenic CG12708 + chrX 15678192 intergenic CG12708 + chrX_18_15675001 chrX_15675001 RAL-913 5109 chrX 15680486 15680493 chrX 15680633 15680640 5 147 0.0 0.0 0.0 5.0 154 chrX 15680486 intergenic not near genes chrX 15680563 intergenic not near genes chrX 15680640 intergenic not near genes chrX_5_15680001 chrX_15680001 RAL-913 5110 chrX 15898389 15898457 chrX 15898593 15898662 20 204 7.0 9.0 8.0 2.2 273 chrX 15898389 intron shi + chrX 15898526 intron shi + chrX 15898662 intron shi + chrX_20_15895001 chrX_15895001 RAL-913 5111 chrX 16004371 16004430 chrX 16004507 16004566 22 135 8.0 9.5 8.8 2.2 195 chrX 16004371 intron vap - chrX 16004468 intron vap - chrX 16004566 intron vap - chrX_22_16000001 chrX_16000001 RAL-913 5112 chrX 16100551 16100588 chrX 16100681 16100718 19 130 6.0 8.0 7.0 2.4 167 chrX 16100551 intron,intron CG42353 -,CG42354 - chrX 16100634 intron,intron CG42353 -,CG42354 - chrX 16100718 intron,intron CG42353 -,CG42354 - chrX_19_16100001 chrX_16100001 RAL-913 5113 chrX 16160247 16160303 chrX 16160373 16160428 12 123 8.0 10.5 9.2 1.2 181 chrX 16160247 intergenic not near genes chrX 16160338 intergenic not near genes chrX 16160428 intergenic not near genes chrX_12_16160001 chrX_16160001 RAL-913 5114 chrX 16185311 16185363 chrX 16185460 16185512 16 148 10.5 13.0 11.8 1.2 201 chrX 16185311 intergenic not near genes chrX 16185412 intergenic not near genes chrX 16185512 intergenic not near genes chrX_16_16185001 chrX_16185001 RAL-913 5115 chrX 16218545 16218612 chrX 16218912 16218979 29 367 8.0 9.5 8.8 3.0 434 chrX 16218545 intergenic not near genes chrX 16218762 intergenic not near genes chrX 16218979 intergenic not near genes chrX_29_16215001 chrX_16215001 RAL-913 5116 chrX 16222738 16222754 chrX 16231138 16231154 roo 5 8400 14.0 6.5 10.2 0.4 8416 chrX 16222738 intergenic not near genes chrX 16226946 intergenic not near genes chrX 16231154 intergenic not near genes chrX_5_16225001 chrX_16225001 RAL-913 5117 chrX 16222758 16222802 chrX 16231133 16231202 roo 17 8397 8.0 5.5 6.8 2.2 8444 chrX 16222758 intergenic not near genes chrX 16226980 intergenic not near genes chrX 16231202 intergenic not near genes chrX_17_16225001 chrX_16225001 RAL-913 5118 chrX 16329358 16329448 chrX 16329505 16329571 6 138 0.0 4.5 2.2 1.9 213 chrX 16329358 exon CG9919 - chrX 16329464 intron CG9919 - chrX 16329571 exon CG9919 - chrX_6_16325001 chrX_16325001 RAL-913 5119 chrX 16340618 16340690 chrX 16349823 16349897 roo 23 9205 0.5 6.5 3.5 5.1 9279 chrX 16340618 3` UTR Dsp1 + chrX 16345258 intergenic not near genes chrX 16349897 intergenic sl + chrX_23_16345001 chrX_16345001 RAL-913 5120 chrX 16408087 16408105 chrX 16408205 16408232 7 123 16.0 9.5 12.8 0.5 145 chrX 16408087 intron CG4301 + chrX 16408160 intron CG4301 + chrX 16408232 intron CG4301 + chrX_7_16405001 chrX_16405001 RAL-913 5121 chrX 16492604 16492670 chrX 16498231 16498297 mdg3 28 5626 11.0 10.5 10.8 2.4 5693 chrX 16492604 intron para - chrX 16495450 intron para - chrX 16498297 exon para - chrX_28_16495001 chrX_16495001 RAL-913 5122 chrX 16569665 16569688 chrX 16569795 16569819 10 131 15.0 12.5 13.8 0.7 154 chrX 16569665 intron CanA-14F - chrX 16569742 intron CanA-14F - chrX 16569819 intron CanA-14F - chrX_10_16565001 chrX_16565001 RAL-913 5123 chrX 16689585 16689647 chrX 16689720 16689783 11 133 18.0 11.5 14.8 0.7 198 chrX 16689585 intron Sep4 - chrX 16689684 intron Sep4 - chrX 16689783 intron Sep4 - chrX_11_16685001 chrX_16685001 RAL-913 5124 chrX 16690097 16690119 chrX 16690232 16690254 4 135 10.5 17.0 13.8 0.3 157 chrX 16690097 intron Sep4 - chrX 16690176 intron Sep4 - chrX 16690254 intron Sep4 - chrX_4_16690001 chrX_16690001 RAL-913 5125 chrX 16690400 16690478 chrX 16690529 16690607 19 125 13.0 13.0 13.0 1.4 207 chrX 16690400 intron Sep4 - chrX 16690504 intron Sep4 - chrX 16690607 intron Sep4 - chrX_19_16690001 chrX_16690001 RAL-913 5126 chrX 16707961 16707973 chrX 16708145 16708157 4 184 0.0 10.5 5.2 0.6 196 chrX 16707961 intron CG4678 + chrX 16708059 intron CG4678 + chrX 16708157 intron CG4678 + chrX_4_16705001 chrX_16705001 RAL-913 5127 chrX 16764688 16764701 chrX 16764815 16764828 5 127 18.5 9.5 14.0 0.3 140 chrX 16764688 intron if - chrX 16764758 intron if - chrX 16764828 intron if - chrX_5_16760001 chrX_16760001 RAL-913 5128 chrX 16785232 16785283 chrX 16785386 16785437 12 153 15.5 11.0 13.2 0.8 205 chrX 16785232 3` UTR CG9609 - chrX 16785334 3` UTR CG9609 - chrX 16785437 3` UTR CG9609 - chrX_12_16785001 chrX_16785001 RAL-913 5129 chrX 16821190 16821256 chrX 16821320 16821386 9 131 3.5 0.0 1.8 3.2 196 chrX 16821190 intron CG4829 + chrX 16821288 intron CG4829 + chrX 16821386 intron CG4829 + chrX_9_16820001 chrX_16820001 RAL-913 5130 chrX 16869653 16869665 chrX 16869786 16869798 5 133 9.5 12.5 11.0 0.4 145 chrX 16869653 intron CG13003 - chrX 16869726 intron CG13003 - chrX 16869798 intron CG13003 - chrX_5_16865001 chrX_16865001 RAL-913 5131 chrX 16870029 16870097 chrX 16870161 16870229 17 132 8.0 7.0 7.5 2.0 200 chrX 16870029 intron CG13003 - chrX 16870129 intron CG13003 - chrX 16870229 intron CG13003 - chrX_17_16870001 chrX_16870001 RAL-913 5132 chrX 16935965 16936021 chrX 16936433 16936489 jockey 13 466 5.0 9.5 7.2 1.6 524 chrX 16935965 intron CG4928 + chrX 16936227 intron CG4928 + chrX 16936489 intron CG4928 + chrX_13_16935001 chrX_16935001 RAL-913 5133 chrX 16983076 16983076 chrX 19404964 19404965 4 2421888 31.0 14.5 22.8 0.2 2421889 chrX 16983076 intron CG45002 - chrX 18194020 intron Frq2 + chrX 19404965 intron kek5 + chrX_4_18190001 chrX_18190001 RAL-913 5134 chrX 17011661 17011681 chrX 17011859 17011879 7 197 10.5 8.0 9.2 0.7 218 chrX 17011661 intron CG45002 - chrX 17011770 intron CG45002 - chrX 17011879 intron CG45002 - chrX_7_17010001 chrX_17010001 RAL-913 5135 chrX 17011682 17011981 chrX 17011854 17012114 30 151 9.5 7.0 8.2 3.3 432 chrX 17011682 intron CG45002 - chrX 17011898 intron CG45002 - chrX 17012114 intron CG45002 - chrX_30_17010001 chrX_17010001 RAL-913 5136 chrX 17011983 17011992 chrX 17012096 17012117 5 127 5.5 11.0 8.2 0.5 134 chrX 17011983 intron CG45002 - chrX 17012050 intron CG45002 - chrX 17012117 intron CG45002 - chrX_5_17010001 chrX_17010001 RAL-913 5137 chrX 17057890 17057957 chrX 17058181 17058248 pogo 19 291 9.0 10.5 9.8 1.8 358 chrX 17057890 intron CG45002 - chrX 17058069 intron CG45002 - chrX 17058248 intron CG45002 - chrX_19_17055001 chrX_17055001 RAL-913 5138 chrX 17061524 17061585 chrX 17061697 17061758 22 173 6.0 3.5 4.8 3.8 234 chrX 17061524 intron CG45002 - chrX 17061641 intron CG45002 - chrX 17061758 intron CG45002 - chrX_22_17060001 chrX_17060001 RAL-913 5139 chrX 17063149 17063204 chrX 17063272 17063341 20 136 7.0 10.5 8.8 2.0 192 chrX 17063149 intron CG45002 - chrX 17063245 intron CG45002 - chrX 17063341 intron CG45002 - chrX_20_17060001 chrX_17060001 RAL-913 5140 chrX 17088135 17088201 chrX 17088778 17088844 6 643 4.0 5.0 4.5 1.1 709 chrX 17088135 intergenic CG8945 - chrX 17088490 intergenic not near genes chrX 17088844 intergenic not near genes chrX_6_17085001 chrX_17085001 RAL-913 5141 chrX 17112172 17112249 chrX 17112304 17112381 20 132 0.0 9.0 4.5 3.6 209 chrX 17112172 intron CG5004 + chrX 17112276 intron CG5004 + chrX 17112381 intron CG5004 + chrX_20_17110001 chrX_17110001 RAL-913 5142 chrX 17149620 17149631 chrX 17154236 17154247 10 4616 53.5 42.5 48.0 0.2 4627 chrX 17149620 intron CG5010 + chrX 17151934 exon xmas-1 - chrX 17154247 intron,3` UTR xmas-1 -,xmas-2 - chrX_10_17150001 chrX_17150001 RAL-913 5143 chrX 17195171 17195232 chrX 17200300 17200331 flea 24 5132 4.5 10.5 7.5 2.8 5160 chrX 17195171 3` UTR baz + chrX 17197751 3` UTR baz + chrX 17200331 3` UTR baz + chrX_24_17195001 chrX_17195001 RAL-913 5144 chrX 17205800 17205857 chrX 17205940 17205997 23 140 5.5 13.0 9.2 2.3 197 chrX 17205800 intergenic not near genes chrX 17205898 intergenic not near genes chrX 17205997 intergenic CG32564 + chrX_23_17205001 chrX_17205001 RAL-913 5145 chrX 17229906 17229966 chrX 17230059 17230112 23 153 9.5 7.0 8.2 2.5 206 chrX 17229906 intergenic CG10597 - chrX 17230009 intergenic CG10597 - chrX 17230112 intergenic CG10597 - chrX_23_17230001 chrX_17230001 RAL-913 5146 chrX 17234219 17234283 chrX 17234363 17234429 12 141 7.5 0.0 3.8 2.5 210 chrX 17234219 intron f + chrX 17234324 intron f + chrX 17234429 intron f + chrX_12_17230001 chrX_17230001 RAL-913 5147 chrX 17237482 17237533 chrX 17237616 17237667 14 134 8.5 7.0 7.8 1.6 185 chrX 17237482 intron f + chrX 17237574 intron f + chrX 17237667 intron f + chrX_14_17235001 chrX_17235001 RAL-913 5148 chrX 17262134 17262174 chrX 17262270 17262310 13 136 11.5 5.5 8.5 1.4 176 chrX 17262134 intron f + chrX 17262222 intron f + chrX 17262310 intron f + chrX_13_17260001 chrX_17260001 RAL-913 5149 chrX 17282835 17282863 chrX 17282963 17282982 7 124 17.5 0.0 8.8 0.7 147 chrX 17282835 5` UTR CG5445 + chrX 17282908 5` UTR CG5445 + chrX 17282982 intron CG5445 + chrX_7_17280001 chrX_17280001 RAL-913 5150 chrX 17290027 17290081 chrX 17290153 17290207 29 126 10.5 12.5 11.5 2.3 180 chrX 17290027 intron,intron CG5445 +,Fim - chrX 17290117 intron,intron CG5445 +,Fim - chrX 17290207 intron,intron CG5445 +,Fim - chrX_29_17290001 chrX_17290001 RAL-913 5151 chrX 17352554 17352614 chrX 17352698 17352767 24 148 0.0 9.5 4.8 4.1 213 chrX 17352554 intergenic not near genes chrX 17352660 intergenic not near genes chrX 17352767 intergenic not near genes chrX_24_17350001 chrX_17350001 RAL-913 5152 chrX 17357488 17357518 chrX 17357632 17357662 13 144 11.0 4.0 7.5 1.5 174 chrX 17357488 intergenic not near genes chrX 17357575 intergenic not near genes chrX 17357662 intergenic not near genes chrX_13_17355001 chrX_17355001 RAL-913 5153 chrX 17431321 17431393 chrX 17431697 17431743 jockey 6 382 4.0 7.5 5.8 0.9 422 chrX 17431321 intron CG12994 - chrX 17431532 intron CG12994 - chrX 17431743 intron CG12994 - chrX_6_17430001 chrX_17430001 RAL-913 5154 chrX 17443073 17443083 chrX 17443247 17443257 5 174 6.5 5.5 6.0 0.7 184 chrX 17443073 intron CG12994 - chrX 17443165 intron CG12994 - chrX 17443257 intron CG12994 - chrX_5_17440001 chrX_17440001 RAL-913 5155 chrX 17479891 17479936 chrX 17480018 17480063 12 120 10.5 10.0 10.2 1.1 172 chrX 17479891 intron CG43658 - chrX 17479977 intron CG43658 - chrX 17480063 intron CG43658 - chrX_12_17475001 chrX_17475001 RAL-913 5156 chrX 17536814 17536870 chrX 17536948 17537003 6 134 12.0 16.0 14.0 0.4 189 chrX 17536814 intron CG43658 - chrX 17536908 intron CG43658 - chrX 17537003 intron CG43658 - chrX_6_17535001 chrX_17535001 RAL-913 5157 chrX 17544965 17545031 chrX 17545097 17545163 27 132 6.0 6.0 6.0 3.9 198 chrX 17544965 intron CG43658 - chrX 17545064 intron CG43658 - chrX 17545163 intron CG43658 - chrX_27_17545001 chrX_17545001 RAL-913 5158 chrX 17546923 17546997 chrX 17547106 17547180 14 183 1.5 10.5 6.0 2.0 257 chrX 17546923 intron CG43658 - chrX 17547052 intron CG43658 - chrX 17547180 intron CG43658 - chrX_14_17545001 chrX_17545001 RAL-913 5159 chrX 17556901 17556973 chrX 17557450 17557519 mdg1 4 541 5.0 7.0 6.0 0.6 618 chrX 17556901 intron CG43658 - chrX 17557210 intron CG43658 - chrX 17557519 intron CG43658 - chrX_4_17555001 chrX_17555001 RAL-913 5160 chrX 17678205 17678234 chrX 17678479 17678508 4 274 33.5 44.0 38.8 0.1 303 chrX 17678205 intron chas - chrX 17678356 intron chas - chrX 17678508 intron chas - chrX_4_17675001 chrX_17675001 RAL-913 5161 chrX 17680877 17680905 chrX 17680984 17681032 7 124 22.0 18.0 20.0 0.3 155 chrX 17680877 intron chas - chrX 17680954 intron chas - chrX 17681032 intron chas - chrX_7_17680001 chrX_17680001 RAL-913 5162 chrX 17708782 17708849 chrX 17708909 17708978 15 128 4.5 5.0 4.8 2.6 196 chrX 17708782 intron CG8173 - chrX 17708880 intron CG8173 - chrX 17708978 intron CG8173 - chrX_15_17705001 chrX_17705001 RAL-913 5163 chrX 17716550 17716604 chrX 17716685 17716741 9 134 9.0 11.0 10.0 0.8 191 chrX 17716550 intron CG42684 + chrX 17716646 intron CG42684 + chrX 17716741 intron CG42684 + chrX_9_17715001 chrX_17715001 RAL-913 5164 chrX 17731870 17731946 chrX 17732083 17732159 17 212 16.5 18.5 17.5 0.9 289 chrX 17731870 intron CG42684 + chrX 17732014 intron CG42684 + chrX 17732159 intron CG42684 + chrX_17_17730001 chrX_17730001 RAL-913 5165 chrX 17741289 17741369 chrX 17741485 17741498 18 192 0.0 8.5 4.2 3.5 209 chrX 17741289 intron CG42684 + chrX 17741394 intron CG42684 + chrX 17741498 intron CG42684 + chrX_18_17740001 chrX_17740001 RAL-913 5166 chrX 17771256 17771263 chrX 17771377 17771389 4 122 24.0 17.5 20.8 0.2 133 chrX 17771256 intron unc-4 + chrX 17771322 intron unc-4 + chrX 17771389 intron unc-4 + chrX_4_17770001 chrX_17770001 RAL-913 5167 chrX 17771277 17771313 chrX 17771376 17771442 5 124 17.5 17.0 17.2 0.3 165 chrX 17771277 intron unc-4 + chrX 17771360 intron unc-4 + chrX 17771442 intron unc-4 + chrX_5_17770001 chrX_17770001 RAL-913 5168 chrX 17792922 17792973 chrX 17796254 17796300 flea 17 3341 4.0 7.0 5.5 2.6 3378 chrX 17792922 intron OdsH + chrX 17794611 intron OdsH + chrX 17796300 intron OdsH + chrX_17_17790001 chrX_17790001 RAL-913 5169 chrX 17965661 17965715 chrX 17965789 17965842 6 128 21.0 18.5 19.8 0.3 181 chrX 17965661 intron Sh - chrX 17965752 intron Sh - chrX 17965842 intron Sh - chrX_6_17965001 chrX_17965001 RAL-913 5170 chrX 17966574 17966621 chrX 17966715 17966762 5 141 20.0 24.5 22.2 0.2 188 chrX 17966574 intron Sh - chrX 17966668 intron Sh - chrX 17966762 intron Sh - chrX_5_17965001 chrX_17965001 RAL-913 5171 chrX 17968858 17968915 chrX 17969027 17969083 19 168 5.5 9.0 7.2 2.3 225 chrX 17968858 intron Sh - chrX 17968970 intron Sh - chrX 17969083 intron Sh - chrX_19_17965001 chrX_17965001 RAL-913 5172 chrX 17978308 17978546 chrX 17978435 17978672 5 120 9.0 8.0 8.5 0.5 364 chrX 17978308 intron Sh - chrX 17978490 intron Sh - chrX 17978672 intron Sh - chrX_5_17975001 chrX_17975001 RAL-913 5173 chrX 17994867 17994892 chrX 17994977 17995022 7 123 6.5 7.0 6.8 0.9 155 chrX 17994867 intron Sh - chrX 17994944 intron Sh - chrX 17995022 intron Sh - chrX_7_17990001 chrX_17990001 RAL-913 5174 chrX 18008303 18008357 chrX 18011882 18011941 25 3580 37.5 47.0 42.2 0.6 3638 chrX 18008303 intron Sh - chrX 18010122 intron Sh - chrX 18011941 intron Sh - chrX_25_18010001 chrX_18010001 RAL-913 5175 chrX 18029145 18029182 chrX 18029276 18029313 12 131 8.0 0.0 4.0 2.4 168 chrX 18029145 intron Sh - chrX 18029229 intron Sh - chrX 18029313 intron Sh - chrX_12_18025001 chrX_18025001 RAL-913 5176 chrX 18128511 18128529 chrX 18131278 18131296 11 2768 46.5 30.0 38.2 0.3 2785 chrX 18128511 intergenic mir-210 + chrX 18129904 exon CG43133 - chrX 18131296 3` UTR ari-1 - chrX_11_18125001 chrX_18125001 RAL-913 5177 chrX 18148588 18148624 chrX 18148741 18148777 13 153 9.5 3.0 6.2 1.8 189 chrX 18148588 intergenic not near genes chrX 18148682 intergenic not near genes chrX 18148777 intergenic not near genes chrX_13_18145001 chrX_18145001 RAL-913 5178 chrX 18175452 18175479 chrX 18175587 18175614 9 134 0.0 10.0 5.0 1.5 162 chrX 18175452 intergenic not near genes chrX 18175533 intergenic not near genes chrX 18175614 intergenic not near genes chrX_9_18175001 chrX_18175001 RAL-913 5179 chrX 18194026 18194097 chrX 18194611 18194681 BS 22 585 6.5 12.0 9.2 2.2 655 chrX 18194026 intron Frq2 + chrX 18194354 intron Frq2 + chrX 18194681 intron Frq2 + chrX_22_18190001 chrX_18190001 RAL-913 5180 chrX 18230523 18230588 chrX 18235176 18235225 18 4644 55.0 50.5 52.8 0.3 4702 chrX 18230523 intergenic not near genes chrX 18232874 intergenic not near genes chrX 18235225 intergenic not near genes chrX_18_18230001 chrX_18230001 RAL-913 5181 chrX 18245672 18245721 chrX 18246045 18246071 10 380 2.5 11.5 7.0 1.2 399 chrX 18245672 intergenic CR45607 - chrX 18245872 intergenic not near genes chrX 18246071 intergenic not near genes chrX_10_18245001 chrX_18245001 RAL-913 5182 chrX 18268578 18268583 chrX 18268732 18268738 5 155 0.0 7.5 3.8 1.0 160 chrX 18268578 intergenic not near genes chrX 18268658 intergenic not near genes chrX 18268738 intergenic not near genes chrX_5_18265001 chrX_18265001 RAL-913 5183 chrX 18270059 18270068 chrX 18270147 18270200 5 122 7.0 4.0 5.5 0.8 141 chrX 18270059 intergenic not near genes chrX 18270130 intergenic not near genes chrX 18270200 intergenic not near genes chrX_5_18270001 chrX_18270001 RAL-913 5184 chrX 18429459 18429512 chrX 18434820 18434873 Transpac 27 5361 10.5 9.0 9.8 2.5 5414 chrX 18429459 intergenic not near genes chrX 18432166 intergenic not near genes chrX 18434873 intergenic not near genes chrX_27_18430001 chrX_18430001 RAL-913 5185 chrX 18455183 18455235 chrX 18455313 18455365 17 130 5.0 10.5 7.8 1.9 182 chrX 18455183 intron CG32547 - chrX 18455274 intron CG32547 - chrX 18455365 intron CG32547 - chrX_17_18455001 chrX_18455001 RAL-913 5186 chrX 18479847 18479869 chrX 18479984 18480006 6 137 5.5 9.0 7.2 0.7 159 chrX 18479847 intergenic Hayan -,CR45714 +,CG32547 - chrX 18479926 intergenic Hayan -,CR45714 +,CG32547 - chrX 18480006 3` UTR Hayan - chrX_6_18475001 chrX_18475001 RAL-913 5187 chrX 18489999 18490024 chrX 18490204 18490229 10 203 9.0 1.5 5.2 1.6 230 chrX 18489999 intergenic CG15046 - chrX 18490114 intergenic CG15046 - chrX 18490229 intergenic not near genes chrX_10_18490001 chrX_18490001 RAL-913 5188 chrX 18490025 18490057 chrX 18490199 18490253 11 195 4.5 1.5 3.0 2.8 228 chrX 18490025 intergenic CG15046 - chrX 18490139 intergenic not near genes chrX 18490253 intergenic not near genes chrX_11_18490001 chrX_18490001 RAL-913 5189 chrX 18511971 18512034 chrX 18512096 18512171 20 135 0.0 3.0 1.5 8.0 200 chrX 18511971 intron Ggt-1 - chrX 18512071 5` UTR Ggt-1 - chrX 18512171 5` UTR Ggt-1 - chrX_20_18510001 chrX_18510001 RAL-913 5190 chrX 18529345 18529397 chrX 18529471 18529523 24 126 8.0 8.5 8.2 2.6 178 chrX 18529345 intron,3` UTR Bx +,CG15047 + chrX 18529434 intron,3` UTR Bx +,CG15047 + chrX 18529523 intron,3` UTR Bx +,CG15047 + chrX_24_18525001 chrX_18525001 RAL-913 5191 chrX 18558727 18558804 chrX 18558859 18558936 32 131 3.0 3.5 3.2 7.6 209 chrX 18558727 intron Bx + chrX 18558832 intron Bx + chrX 18558936 intron Bx + chrX_32_18555001 chrX_18555001 RAL-913 5192 chrX 12946233 12946233 chrX 18572525 18572526 12 5626291 28.0 36.0 32.0 0.4 5626293 chrX 12946233 3` UTR fne + chrX 15759380 intron Graf - chrX 18572526 intergenic not near genes chrX_12_15755001 chrX_15755001 RAL-913 5193 chrX 18582113 18582165 chrX 18582241 18582276 17 126 8.0 6.5 7.2 2.1 163 chrX 18582113 intergenic not near genes chrX 18582194 intergenic not near genes chrX 18582276 intergenic not near genes chrX_17_18580001 chrX_18580001 RAL-913 5194 chrX 18644972 18645037 chrX 18645120 18645185 22 146 9.5 7.0 8.2 2.4 213 chrX 18644972 intron Rip11 - chrX 18645078 intron Rip11 - chrX 18645185 intron Rip11 - chrX_22_18645001 chrX_18645001 RAL-913 5195 chrX 18698797 18698878 chrX 18698964 18699045 20 165 5.0 4.0 4.5 3.6 248 chrX 18698797 intergenic not near genes chrX 18698921 intergenic not near genes chrX 18699045 intergenic not near genes chrX_20_18695001 chrX_18695001 RAL-913 5196 chrX 18896471 18896547 chrX 18896632 18896708 23 161 5.5 10.0 7.8 2.6 237 chrX 18896471 3` UTR CG7349 + chrX 18896590 intergenic CG7349 + chrX 18896708 intergenic CG7349 + chrX_23_18895001 chrX_18895001 RAL-913 5197 chrX 18927578 18927607 chrX 18927714 18927743 13 136 12.5 4.5 8.5 1.4 165 chrX 18927578 intergenic not near genes chrX 18927660 intergenic not near genes chrX 18927743 intergenic not near genes chrX_13_18925001 chrX_18925001 RAL-913 5198 chrX 18957025 18957093 chrX 18965738 18965806 roo 13 8713 8.5 8.5 8.5 1.4 8781 chrX 18957025 intron CG43759 + chrX 18961416 intron CG43759 + chrX 18965806 intron CG43759 + chrX_13_18960001 chrX_18960001 RAL-913 5199 chrX 18994441 18994464 chrX 18994543 18994559 9 112 14.0 12.5 13.2 0.6 118 chrX 18994441 intron CG43759 + chrX 18994500 intron CG43759 + chrX 18994559 intron CG43759 + chrX_9_18990001 chrX_18990001 RAL-913 5200 chrX 19036392 19036400 chrX 19036518 19036526 4 126 6.0 0.0 3.0 1.0 134 chrX 19036392 intergenic not near genes chrX 19036459 intergenic not near genes chrX 19036526 intergenic not near genes chrX_4_19035001 chrX_19035001 RAL-913 5201 chrX 19056074 19056092 chrX 19056226 19056245 6 153 3.5 12.5 8.0 0.7 171 chrX 19056074 intergenic not near genes chrX 19056160 intergenic not near genes chrX 19056245 intergenic not near genes chrX_6_19055001 chrX_19055001 RAL-913 5202 chrX 19060368 19060425 chrX 19065202 19065259 Doc 13 4834 11.5 12.0 11.8 1.0 4891 chrX 19060368 intron CG14190 + chrX 19062814 intron CG14190 + chrX 19065259 intron CG14190 + chrX_13_19060001 chrX_19060001 RAL-913 5203 chrX 19073634 19073696 chrX 19073771 19073833 20 137 6.5 6.0 6.2 2.8 199 chrX 19073634 intergenic not near genes chrX 19073734 intergenic not near genes chrX 19073833 intergenic not near genes chrX_20_19070001 chrX_19070001 RAL-913 5204 chrX 19084044 19084105 chrX 19084214 19084275 13 170 6.5 0.0 3.2 3.1 231 chrX 19084044 intergenic CR45503 + chrX 19084160 intergenic CR45503 + chrX 19084275 intergenic CR45503 + chrX_13_19080001 chrX_19080001 RAL-913 5205 chrX 19101162 19101210 chrX 19101327 19101375 9 162 4.5 0.0 2.2 2.8 213 chrX 19101162 intergenic not near genes chrX 19101268 intergenic not near genes chrX 19101375 intergenic not near genes chrX_9_19100001 chrX_19100001 RAL-913 5206 chrX 19105556 19105580 chrX 19105789 19105815 5 234 7.5 0.0 3.8 1.0 259 chrX 19105556 intergenic not near genes chrX 19105686 intergenic not near genes chrX 19105815 intergenic not near genes chrX_5_19105001 chrX_19105001 RAL-913 5207 chrX 19136510 19136577 chrX 19143480 19143506 412 17 6966 9.0 10.0 9.5 1.6 6996 chrX 19136510 intergenic not near genes chrX 19140008 intergenic not near genes chrX 19143506 3` UTR RhoGAP18B - chrX_17_19140001 chrX_19140001 RAL-913 5208 chrX 19171578 19171611 chrX 19171714 19171747 13 136 0.5 16.0 8.2 1.4 169 chrX 19171578 intron pncr004:X - chrX 19171662 intron pncr004:X - chrX 19171747 intron pncr004:X - chrX_13_19170001 chrX_19170001 RAL-913 5209 chrX 19186601 19186617 chrX 19186723 19186744 4 123 10.5 19.0 14.8 0.3 143 chrX 19186601 exon CG33253 + chrX 19186672 exon CG33253 + chrX 19186744 exon CG33253 + chrX_4_19185001 chrX_19185001 RAL-913 5210 chrX 19339731 19339761 chrX 19339857 19339887 12 126 10.0 3.5 6.8 1.5 156 chrX 19339731 intron nAChRalpha7 - chrX 19339809 intron nAChRalpha7 - chrX 19339887 intron nAChRalpha7 - chrX_12_19335001 chrX_19335001 RAL-913 5211 chrX 19380116 19380181 chrX 19380407 19380472 pogo 28 291 8.0 11.0 9.5 2.7 356 chrX 19380116 intron kek5 + chrX 19380294 intron kek5 + chrX 19380472 intron kek5 + chrX_28_19380001 chrX_19380001 RAL-913 5212 chrX 19437228 19437280 chrX 19444799 19444849 Idefix 13 7565 7.5 1.0 4.2 2.5 7621 chrX 19437228 intron kek5 + chrX 19441038 intron kek5 + chrX 19444849 intron kek5 + chrX_13_19440001 chrX_19440001 RAL-913 5213 chrX 19459950 19460022 chrX 19460102 19460160 12 142 0.0 5.5 2.8 3.2 210 chrX 19459950 intron kek5 + chrX 19460055 intron kek5 + chrX 19460160 intron kek5 + chrX_12_19460001 chrX_19460001 RAL-913 5214 chrX 19462702 19462729 chrX 19462833 19462836 7 124 4.0 7.5 5.8 1.0 134 chrX 19462702 intron kek5 + chrX 19462769 intron kek5 + chrX 19462836 intron kek5 + chrX_7_19460001 chrX_19460001 RAL-913 5215 chrX 19472081 19472147 chrX 19472702 19472767 jockey 19 616 10.5 5.5 8.0 2.1 686 chrX 19472081 intergenic kek5 + chrX 19472424 intergenic not near genes chrX 19472767 intergenic not near genes chrX_19_19470001 chrX_19470001 RAL-913 5216 chrX 19541380 19541444 chrX 19541510 19541574 28 130 5.5 6.0 5.8 4.1 194 chrX 19541380 intron CG32532 - chrX 19541477 intron CG32532 - chrX 19541574 intron CG32532 - chrX_28_19540001 chrX_19540001 RAL-913 5217 chrX 19585988 19586060 chrX 19586115 19586167 17 114 6.0 9.0 7.5 2.0 179 chrX 19585988 exon CG14204 + chrX 19586078 exon CG14204 + chrX 19586167 exon CG14204 + chrX_17_19585001 chrX_19585001 RAL-913 5218 chrX 19710027 19710093 chrX 19711863 19711929 S-element 25 1834 6.5 9.5 8.0 2.8 1902 chrX 19710027 intron meso18E - chrX 19710978 intron meso18E - chrX 19711929 intron meso18E - chrX_25_19710001 chrX_19710001 RAL-913 5219 chrX 19755490 19755549 chrX 19755625 19755684 22 134 11.5 10.5 11.0 1.8 194 chrX 19755490 intron Pmp70 + chrX 19755587 intron Pmp70 + chrX 19755684 intron Pmp70 + chrX_22_19755001 chrX_19755001 RAL-913 5220 chrX 19797305 19797335 chrX 19804668 19804698 Stalker4 11 7363 15.5 5.5 10.5 1.0 7393 chrX 19797305 intergenic not near genes chrX 19801002 intergenic not near genes chrX 19804698 intergenic not near genes chrX_11_19800001 chrX_19800001 RAL-913 5221 chrX 19881411 19881473 chrX 19881542 19881604 25 130 5.5 7.0 6.2 3.5 193 chrX 19881411 intron Hers + chrX 19881508 intron Hers + chrX 19881604 intron Hers + chrX_25_19880001 chrX_19880001 RAL-913 5222 chrX 19897345 19897409 chrX 19897472 19897536 31 127 10.0 7.0 8.5 3.3 191 chrX 19897345 intron Hers + chrX 19897440 intron Hers + chrX 19897536 intron Hers + chrX_31_19895001 chrX_19895001 RAL-913 5223 chrX 19971775 19971825 chrX 19971901 19971921 28 126 6.0 6.5 6.2 3.9 146 chrX 19971775 intergenic not near genes chrX 19971848 intergenic not near genes chrX 19971921 intergenic not near genes chrX_28_19970001 chrX_19970001 RAL-913 5224 chrX 19983384 19983407 chrX 19983519 19983541 11 135 2.5 0.0 1.2 5.0 157 chrX 19983384 intergenic not near genes chrX 19983462 intergenic not near genes chrX 19983541 intergenic not near genes chrX_11_19980001 chrX_19980001 RAL-913 5225 chrX 19992417 19992433 chrX 19992495 19992510 4 93 11.0 10.5 10.8 0.3 93 chrX 19992417 intergenic not near genes chrX 19992464 intergenic not near genes chrX 19992510 intergenic not near genes chrX_4_19990001 chrX_19990001 RAL-913 5226 chrX 20041482 20041554 chrX 20041612 20041684 18 130 8.0 8.0 8.0 2.0 202 chrX 20041482 intron Dop2R - chrX 20041583 intron Dop2R - chrX 20041684 intron Dop2R - chrX_18_20040001 chrX_20040001 RAL-913 5227 chrX 20065761 20065832 chrX 20065890 20065961 24 128 9.5 7.5 8.5 2.5 200 chrX 20065761 intergenic not near genes chrX 20065861 intergenic not near genes chrX 20065961 intergenic not near genes chrX_24_20065001 chrX_20065001 RAL-913 5228 chrX 20069221 20069290 chrX 20069404 20069473 14 182 3.5 3.0 3.2 3.3 252 chrX 20069221 intergenic not near genes chrX 20069347 intergenic not near genes chrX 20069473 intergenic not near genes chrX_14_20065001 chrX_20065001 RAL-913 5229 chrX 20090030 20090095 chrX 20090167 20090232 18 137 1.5 4.5 3.0 4.5 202 chrX 20090030 intergenic not near genes chrX 20090131 intergenic not near genes chrX 20090232 intergenic CR45628 + chrX_18_20090001 chrX_20090001 RAL-913 5230 chrX 20126841 20126914 chrX 20126970 20127013 14 119 5.0 5.0 5.0 2.3 172 chrX 20126841 intergenic not near genes chrX 20126927 intergenic not near genes chrX 20127013 intergenic not near genes chrX_14_20125001 chrX_20125001 RAL-913 5231 chrX 20132253 20132307 chrX 20132386 20132440 21 129 8.5 4.5 6.5 2.8 187 chrX 20132253 intergenic not near genes chrX 20132346 intergenic not near genes chrX 20132440 intergenic not near genes chrX_21_20130001 chrX_20130001 RAL-913 5232 chrX 20144292 20144311 chrX 20144422 20144441 9 130 0.0 12.0 6.0 1.3 149 chrX 20144292 intergenic not near genes chrX 20144366 intergenic not near genes chrX 20144441 intergenic not near genes chrX_9_20140001 chrX_20140001 RAL-913 5233 chrX 20144443 20144453 chrX 21085288 21085298 INE-1 4 940845 12.0 36.5 24.2 0.2 940855 chrX 20144443 intergenic not near genes chrX 20614870 intron RunxA - chrX 21085298 intergenic not near genes chrX_4_20610001 chrX_20610001 RAL-913 5234 chrX 20146981 20147056 chrX 20147110 20147186 28 128 6.5 5.0 5.8 4.1 205 chrX 20146981 intergenic not near genes chrX 20147084 intergenic not near genes chrX 20147186 intergenic not near genes chrX_28_20145001 chrX_20145001 RAL-913 5235 chrX 20271455 20271527 chrX 20271597 20271664 13 140 7.5 0.0 3.8 2.7 209 chrX 20271455 intergenic not near genes chrX 20271560 intergenic not near genes chrX 20271664 intergenic not near genes chrX_13_20270001 chrX_20270001 RAL-913 5236 chrX 20279702 20279777 chrX 20279833 20279908 27 131 9.5 8.0 8.8 2.8 206 chrX 20279702 intergenic not near genes chrX 20279805 intergenic not near genes chrX 20279908 intergenic not near genes chrX_27_20275001 chrX_20275001 RAL-913 5237 chrX 20312842 20312910 chrX 20312970 20312977 26 125 9.5 8.0 8.8 2.7 135 chrX 20312842 intron CG1504 - chrX 20312910 intron CG1504 - chrX 20312977 intron CG1504 - chrX_26_20310001 chrX_20310001 RAL-913 5238 chrX 20314222 20314264 chrX 20314354 20314370 11 124 10.0 13.0 11.5 0.9 148 chrX 20314222 intron CG1504 - chrX 20314296 intron CG1504 - chrX 20314370 intron CG1504 - chrX_11_20310001 chrX_20310001 RAL-913 5239 chrX 20317737 20317792 chrX 20317870 20317925 14 130 12.5 9.0 10.8 1.2 188 chrX 20317737 intron CG1504 - chrX 20317831 intron CG1504 - chrX 20317925 intron CG1504 - chrX_14_20315001 chrX_20315001 RAL-913 5240 chrX 20320250 20320302 chrX 20320377 20320429 20 126 6.5 6.0 6.2 2.8 179 chrX 20320250 intron CG1504 - chrX 20320340 intron CG1504 - chrX 20320429 intron CG1504 - chrX_20_20320001 chrX_20320001 RAL-913 5241 chrX 20333923 20333975 chrX 20334076 20334145 17 160 4.5 5.5 5.0 2.8 222 chrX 20333923 intergenic not near genes chrX 20334034 intergenic not near genes chrX 20334145 intergenic not near genes chrX_17_20330001 chrX_20330001 RAL-913 5242 chrX 20362116 20362167 chrX 20362506 20362557 18 390 3.0 1.5 2.2 5.6 441 chrX 20362116 intergenic not near genes chrX 20362336 intergenic not near genes chrX 20362557 intergenic not near genes chrX_18_20360001 chrX_20360001 RAL-913 5243 chrX 20362842 20362872 chrX 20362955 20362958 6 114 0.5 0.0 0.2 5.0 116 chrX 20362842 intergenic not near genes chrX 20362900 intergenic not near genes chrX 20362958 intergenic not near genes chrX_6_20360001 chrX_20360001 RAL-913 5244 chrX 20379092 20379108 chrX 20379661 20379677 5 567 15.5 9.0 12.2 0.4 585 chrX 20379092 intergenic not near genes chrX 20379384 intergenic not near genes chrX 20379677 intergenic not near genes chrX_5_20375001 chrX_20375001 RAL-913 5245 chrX 20379111 20379159 chrX 20379660 20379728 18 562 6.0 9.0 7.5 2.1 617 chrX 20379111 intergenic not near genes chrX 20379420 intergenic not near genes chrX 20379728 intergenic not near genes chrX_18_20375001 chrX_20375001 RAL-913 5246 chrX 20415023 20415033 chrX 20415156 20415158 4 131 4.5 0.0 2.2 1.2 135 chrX 20415023 intergenic not near genes chrX 20415090 intergenic not near genes chrX 20415158 intergenic not near genes chrX_4_20415001 chrX_20415001 RAL-913 5247 chrX 20415041 20415081 chrX 20415153 20415207 4 124 0.0 0.0 0.0 4.0 166 chrX 20415041 intergenic not near genes chrX 20415124 intergenic not near genes chrX 20415207 intergenic not near genes chrX_4_20415001 chrX_20415001 RAL-913 5248 chrX 20426184 20426196 chrX 20428328 20428347 4 2150 34.0 37.0 35.5 0.1 2163 chrX 20426184 exon cactin + chrX 20427266 intergenic CG11710 -,CG15456 - chrX 20428347 exon CG11710 - chrX_4_20425001 chrX_20425001 RAL-913 5249 chrX 20426178 20426255 chrX 20428348 20428399 18 2160 54.5 36.0 45.2 0.4 2221 chrX 20426178 exon cactin + chrX 20427288 intergenic CG11710 -,CG15456 - chrX 20428399 exon CG11710 - chrX_18_20425001 chrX_20425001 RAL-913 5250 chrX 20443161 20443203 chrX 20443287 20443329 15 126 8.0 11.0 9.5 1.4 168 chrX 20443161 exon CG1695 + chrX 20443245 intron CG1695 + chrX 20443329 intron CG1695 + chrX_15_20440001 chrX_20440001 RAL-913 5251 chrX 20448387 20448445 chrX 20448521 20448579 9 134 6.0 3.5 4.8 1.6 192 chrX 20448387 intergenic not near genes chrX 20448483 intergenic not near genes chrX 20448579 intergenic not near genes chrX_9_20445001 chrX_20445001 RAL-913 5252 chrX 20467957 20468036 chrX 20468102 20468168 12 138 0.0 0.0 0.0 12.0 211 chrX 20467957 intron GstT3 + chrX 20468062 intron GstT3 + chrX 20468168 intron GstT3 + chrX_12_20465001 chrX_20465001 RAL-913 5253 chrX 20484339 20484403 chrX 20484494 20484558 25 155 6.0 8.5 7.2 3.0 219 chrX 20484339 intron RhoGAP19D - chrX 20484448 intron RhoGAP19D - chrX 20484558 intron RhoGAP19D - chrX_25_20480001 chrX_20480001 RAL-913 5254 chrX 20493881 20493927 chrX 20494090 20494138 11 211 0.0 13.0 6.5 1.5 257 chrX 20493881 intron RhoGAP19D - chrX 20494010 intron RhoGAP19D - chrX 20494138 intron RhoGAP19D - chrX_11_20490001 chrX_20490001 RAL-913 5255 chrX 20503121 20503196 chrX 20503268 20503343 20 145 5.5 7.5 6.5 2.7 222 chrX 20503121 intron RhoGAP19D - chrX 20503232 intron RhoGAP19D - chrX 20503343 intron RhoGAP19D - chrX_20_20500001 chrX_20500001 RAL-913 5256 chrX 20504086 20504146 chrX 20505657 20505717 transib2 20 1570 12.0 7.0 9.5 1.9 1631 chrX 20504086 intron RhoGAP19D - chrX 20504902 intron RhoGAP19D - chrX 20505717 intron RhoGAP19D - chrX_20_20500001 chrX_20500001 RAL-913 5257 chrX 20531651 20531685 chrX 20531784 20531825 10 139 5.5 9.0 7.2 1.2 174 chrX 20531651 intergenic not near genes chrX 20531738 intergenic not near genes chrX 20531825 intergenic not near genes chrX_10_20530001 chrX_20530001 RAL-913 5258 chrX 20541325 20541329 chrX 20541468 20541502 5 167 0.0 0.0 0.0 5.0 177 chrX 20541325 intron RunxB + chrX 20541414 intron RunxB + chrX 20541502 intron RunxB + chrX_5_20540001 chrX_20540001 RAL-913 5259 chrX 20546512 20546561 chrX 20546715 20546762 18 213 5.0 4.5 4.8 3.1 250 chrX 20546512 intron RunxB + chrX 20546637 intron RunxB + chrX 20546762 intron RunxB + chrX_18_20545001 chrX_20545001 RAL-913 5260 chrX 20575118 20575170 chrX 20575246 20575298 21 128 4.0 3.0 3.5 4.7 180 chrX 20575118 intergenic CG42580 + chrX 20575208 intergenic not near genes chrX 20575298 intergenic not near genes chrX_21_20575001 chrX_20575001 RAL-913 5261 chrX 20594252 20594327 chrX 20594388 20594444 21 132 2.5 6.5 4.5 3.8 192 chrX 20594252 intron RunxA - chrX 20594348 intron RunxA - chrX 20594444 intron RunxA - chrX_21_20590001 chrX_20590001 RAL-913 5262 chrX 20615102 20615108 chrX 20615237 20615243 4 135 7.0 0.0 3.5 0.9 141 chrX 20615102 intron RunxA - chrX 20615172 intron RunxA - chrX 20615243 intron RunxA - chrX_4_20615001 chrX_20615001 RAL-913 5263 chrX 20635384 20635445 chrX 20635599 20635661 18 216 1.5 8.0 4.8 3.1 277 chrX 20635384 intergenic not near genes chrX 20635522 intergenic not near genes chrX 20635661 intergenic not near genes chrX_18_20635001 chrX_20635001 RAL-913 5264 chrX 20662268 20662343 chrX 20662401 20662472 14 130 4.5 6.5 5.5 2.2 204 chrX 20662268 intron CG1835 + chrX 20662370 intron CG1835 + chrX 20662472 intron CG1835 + chrX_14_20660001 chrX_20660001 RAL-913 5265 chrX 20810675 20810683 chrX 20810802 20810810 6 127 13.0 3.5 8.2 0.7 135 chrX 20810675 intron shakB - chrX 20810742 intron shakB - chrX 20810810 intron shakB - chrX_6_20810001 chrX_20810001 RAL-913 5266 chrX 20810738 20810748 chrX 20810866 20810876 4 128 5.0 15.5 10.2 0.4 138 chrX 20810738 intron shakB - chrX 20810807 intron shakB - chrX 20810876 intron shakB - chrX_4_20810001 chrX_20810001 RAL-913 5267 chrX 20836685 20836750 chrX 20844337 20844402 roo 27 7652 5.5 7.5 6.5 3.6 7717 chrX 20836685 intron shakB - chrX 20840544 intron shakB - chrX 20844402 intron shakB - chrX_27_20840001 chrX_20840001 RAL-913 5268 chrX 20940677 20940728 chrX 20942196 20942233 hobo 17 1518 10.0 2.5 6.2 2.4 1556 chrX 20940677 intergenic not near genes chrX 20941455 intergenic not near genes chrX 20942233 intergenic not near genes chrX_17_20940001 chrX_20940001 RAL-913 5269 chrX 20956943 20957003 chrX 20962435 20962495 I-element 19 5492 10.5 11.5 11.0 1.6 5552 chrX 20956943 intergenic not near genes chrX 20959719 intergenic not near genes chrX 20962495 intergenic Ser6 - chrX_19_20955001 chrX_20955001 RAL-913 5270 chrX 20988835 20988857 chrX 20988987 20989006 10 150 14.5 8.5 11.5 0.8 171 chrX 20988835 intergenic not near genes chrX 20988920 intergenic not near genes chrX 20989006 intergenic not near genes chrX_10_20985001 chrX_20985001 RAL-913 5271 chrX 21029097 21029162 chrX 21029364 21029429 8 264 9.0 6.0 7.5 0.9 332 chrX 21029097 3` UTR CG1529 - chrX 21029263 3` UTR CG1529 - chrX 21029429 3` UTR CG1529 - chrX_8_21025001 chrX_21025001 RAL-913 5272 chrX 21029751 21029809 chrX 21029942 21030000 12 191 0.0 8.5 4.2 2.3 249 chrX 21029751 3` UTR CG1529 - chrX 21029876 3` UTR CG1529 - chrX 21030000 3` UTR CG1529 - chrX_12_21025001 chrX_21025001 RAL-913 5273 chrX 21076280 21076335 chrX 21076409 21076464 22 129 9.0 1.0 5.0 3.7 184 chrX 21076280 intron bves + chrX 21076372 intron bves + chrX 21076464 intron bves + chrX_22_21075001 chrX_21075001 RAL-913 5274 chrX 21077546 21077618 chrX 21077685 21077757 28 139 12.0 6.0 9.0 2.8 211 chrX 21077546 intron bves + chrX 21077652 intron bves + chrX 21077757 intron bves + chrX_28_21075001 chrX_21075001 RAL-913 5275 chrX 21078720 21078776 chrX 21078848 21078884 21 127 7.0 0.0 3.5 4.7 164 chrX 21078720 intron bves + chrX 21078802 intron bves + chrX 21078884 intron bves + chrX_21_21075001 chrX_21075001 RAL-913 5276 chrX 20144573 20144585 chrX 21085236 21085248 4 940664 20.5 37.5 29.0 0.1 940675 chrX 20144573 intergenic not near genes chrX 20614910 intron RunxA - chrX 21085248 intergenic not near genes chrX_4_20610001 chrX_20610001 RAL-913 5277 chrX 21086090 21086152 chrX 21087169 21087231 jockey 19 1079 8.5 11.5 10.0 1.7 1141 chrX 21086090 intergenic not near genes chrX 21086660 intergenic not near genes chrX 21087231 intergenic not near genes chrX_19_21085001 chrX_21085001 RAL-913 5278 chrX 21087997 21088025 chrX 21088179 21088207 9 182 14.5 7.0 10.8 0.8 210 chrX 21087997 intergenic not near genes chrX 21088102 intergenic not near genes chrX 21088207 intergenic not near genes chrX_9_21085001 chrX_21085001 RAL-913 5279 chrX 21088026 21088053 chrX 21088178 21088235 15 179 10.0 6.5 8.2 1.6 209 chrX 21088026 intergenic not near genes chrX 21088130 intergenic not near genes chrX 21088235 intergenic not near genes chrX_15_21085001 chrX_21085001 RAL-913 5280 chrX 21166092 21166167 chrX 21166220 21166298 33 128 5.5 5.0 5.2 5.3 206 chrX 21166092 intergenic not near genes chrX 21166195 intergenic not near genes chrX 21166298 intergenic not near genes chrX_33_21165001 chrX_21165001 RAL-913 5281 chrX 21190556 21190823 chrX 21190752 21190954 21 129 1.0 0.5 0.8 11.7 398 chrX 21190556 intergenic not near genes chrX 21190755 intergenic not near genes chrX 21190954 intergenic not near genes chrX_21_21190001 chrX_21190001 RAL-913 5282 chrX 21222612 21222678 chrX 21222739 21222805 16 126 3.0 5.5 4.2 3.1 193 chrX 21222612 intron CG32521 - chrX 21222708 intron CG32521 - chrX 21222805 intron CG32521 - chrX_16_21220001 chrX_21220001 RAL-913 5283 chrX 21241703 21241718 chrX 21241854 21241869 8 150 4.5 0.0 2.2 2.5 166 chrX 21241703 intron CG32521 - chrX 21241786 intron CG32521 - chrX 21241869 intron CG32521 - chrX_8_21240001 chrX_21240001 RAL-913 5284 chrX 21254591 21254597 chrX 21254724 21254736 5 138 16.5 1.0 8.8 0.5 145 chrX 21254591 intron CG32521 - chrX 21254664 intron CG32521 - chrX 21254736 intron CG32521 - chrX_5_21250001 chrX_21250001 RAL-913 5285 chrX 21255448 21255492 chrX 21255624 21255661 11 175 7.0 0.0 3.5 2.4 213 chrX 21255448 intron CG32521 - chrX 21255554 intron CG32521 - chrX 21255661 intron CG32521 - chrX_11_21255001 chrX_21255001 RAL-913 5286 chrX 21264688 21264751 chrX 21264814 21264869 18 125 7.0 8.5 7.8 2.0 181 chrX 21264688 intron CG32521 - chrX 21264778 intron CG32521 - chrX 21264869 intron CG32521 - chrX_18_21260001 chrX_21260001 RAL-913 5287 chrX 21267453 21267496 chrX 21268344 21268358 8 892 9.5 6.5 8.0 0.9 905 chrX 21267453 intron CG32521 - chrX 21267906 intron CG32521 - chrX 21268358 intron CG32521 - chrX_8_21265001 chrX_21265001 RAL-913 5288 chrX 21328067 21328144 chrX 21328228 21328306 20 161 9.0 9.5 9.2 2.0 239 chrX 21328067 3` UTR CG1486 + chrX 21328186 intergenic CG1486 +,tty - chrX 21328306 intergenic CG1486 +,tty - chrX_20_21325001 chrX_21325001 RAL-913 5289 chrX 21410434 21410454 chrX 21410567 21410587 10 133 14.0 0.0 7.0 1.2 153 chrX 21410434 intron CR45003 - chrX 21410510 3` UTR CR45003 - chrX 21410587 intergenic CR45003 - chrX_10_21410001 chrX_21410001 RAL-913 5290 chrX 21454848 21454871 chrX 21454982 21455002 12 133 6.0 14.5 10.2 1.1 154 chrX 21454848 intron CG42343 - chrX 21454925 intron CG42343 - chrX 21455002 intron CG42343 - chrX_12_21450001 chrX_21450001 RAL-913 5291 chrX 21455173 21455239 chrX 21455402 21455475 23 237 3.5 6.0 4.8 4.0 302 chrX 21455173 intron CG42343 - chrX 21455324 intron CG42343 - chrX 21455475 intron CG42343 - chrX_23_21455001 chrX_21455001 RAL-913 5292 chrX 21458645 21458710 chrX 21464131 21464196 Ivk 12 5486 12.0 3.5 7.8 1.4 5551 chrX 21458645 intergenic not near genes chrX 21461420 intergenic not near genes chrX 21464196 intergenic not near genes chrX_12_21460001 chrX_21460001 RAL-913 5293 chrX 21474368 21474432 chrX 21474777 21474848 1731 16 414 6.0 8.5 7.2 2.0 480 chrX 21474368 intergenic not near genes chrX 21474608 intergenic not near genes chrX 21474848 intergenic not near genes chrX_16_21470001 chrX_21470001 RAL-913 5294 chrX 21500514 21500588 chrX 21500765 21500834 9 250 3.0 8.0 5.5 1.4 320 chrX 21500514 intron CR45082 - chrX 21500674 intron CR45082 - chrX 21500834 intron CR45082 - chrX_9_21500001 chrX_21500001 RAL-913 5295 chrX 21516943 21516962 chrX 21517072 21517091 10 128 11.0 7.5 9.2 1.0 148 chrX 21516943 intron CR45082 - chrX 21517017 intron CR45082 - chrX 21517091 intron CR45082 - chrX_10_21515001 chrX_21515001 RAL-913 5296 chrX 21516963 21517012 chrX 21517067 21517141 13 127 7.5 7.0 7.2 1.6 178 chrX 21516963 intron CR45082 - chrX 21517052 intron CR45082 - chrX 21517141 intron CR45082 - chrX_13_21515001 chrX_21515001 RAL-913 5297 chrX 21567917 21567934 chrX 21568048 21568059 6 127 15.5 0.5 8.0 0.7 142 chrX 21567917 intergenic not near genes chrX 21567988 intergenic not near genes chrX 21568059 intergenic not near genes chrX_6_21565001 chrX_21565001 RAL-913 5298 chrX 21595553 21595568 chrX 21598657 21598672 micropia 5 3104 14.0 11.5 12.8 0.4 3119 chrX 21595553 intergenic not near genes chrX 21597112 intergenic not near genes chrX 21598672 intergenic not near genes chrX_5_21595001 chrX_21595001 RAL-913 5299 chrX 21668211 21668286 chrX 21668346 21668421 30 135 49.0 46.5 47.8 0.6 210 chrX 21668211 intergenic not near genes chrX 21668316 intergenic not near genes chrX 21668421 intergenic not near genes chrX_30_21665001 chrX_21665001 RAL-913 5300 chrX 22583475 22583542 chrX 22583601 22583668 25 125 8.0 9.5 8.8 2.6 193 chrX 22583475 intergenic Cda4 - chrX 22583572 intergenic Cda4 - chrX 22583668 3` UTR Cda4 - chrX_25_22580001 chrX_22580001 RAL-913 5301 chrX 22585463 22585535 chrX 22585596 22585654 9 131 7.0 0.5 3.8 1.9 191 chrX 22585463 intron Cda4 - chrX 22585558 intron Cda4 - chrX 22585654 intron Cda4 - chrX_9_22585001 chrX_22585001 RAL-913 5302 chrX 22660530 22660599 chrX 22660664 22660733 13 133 7.0 6.5 6.8 1.7 203 chrX 22660530 intron CR44997 + chrX 22660632 intron CR44997 + chrX 22660733 intron CR44997 + chrX_13_22660001 chrX_22660001 RAL-913 5303 chrX 22697467 22697512 chrX 22701814 22701859 Juan 21 4347 9.0 14.0 11.5 1.7 4392 chrX 22697467 intron CR44997 + chrX 22699663 intron CR44997 + chrX 22701859 intron CR44997 + chrX_21_22695001 chrX_22695001 RAL-913 5304 chrX 22734412 22734448 chrX 22734541 22734577 10 129 5.0 4.0 4.5 1.8 165 chrX 22734412 intron CR44997 + chrX 22734494 intron CR44997 + chrX 22734577 intron CR44997 + chrX_10_22730001 chrX_22730001 RAL-913 5305 chrX 22771463 22771524 chrX 22774804 22774865 297 18 3339 8.0 10.0 9.0 1.8 3402 chrX 22771463 intron CR44997 + chrX 22773164 intron CR44997 + chrX 22774865 intron CR44997 + chrX_18_22770001 chrX_22770001 RAL-913 5306 chrX 22784048 22784101 chrX 22784181 22784234 18 133 3.0 8.0 5.5 2.8 186 chrX 22784048 intron CR44997 + chrX 22784141 intron CR44997 + chrX 22784234 intron CR44997 + chrX_18_22780001 chrX_22780001 RAL-913 5307 chrX 22785566 22785633 chrX 22785707 22785774 22 138 6.5 8.5 7.5 2.6 208 chrX 22785566 intron CR44997 + chrX 22785670 intron CR44997 + chrX 22785774 intron CR44997 + chrX_22_22785001 chrX_22785001 RAL-913 5308 chrX 22796947 22797024 chrX 22797082 22797159 23 132 1.5 6.0 3.8 4.8 212 chrX 22796947 intron CR44997 + chrX 22797053 intron CR44997 + chrX 22797159 intron CR44997 + chrX_23_22795001 chrX_22795001 RAL-913 5309 chrX 22811950 22812004 chrX 22816772 22816826 F-element 19 4821 7.0 8.0 7.5 2.2 4876 chrX 22811950 intergenic CG12446 - chrX 22814388 intergenic not near genes chrX 22816826 intergenic not near genes chrX_19_22810001 chrX_22810001 RAL-913 5310 chrX 22824218 22824435 chrX 22824394 22824618 35 180 0.0 0.0 0.0 35.0 400 chrX 22824218 intergenic fog - chrX 22824418 3` UTR fog - chrX 22824618 3` UTR fog - chrX_35_22820001 chrX_22820001 RAL-913 5311 chrX 22867936 22867953 chrX 22868100 22868112 8 163 10.0 4.5 7.2 1.0 176 chrX 22867936 exon CG42346 + chrX 22868024 intron CG42346 + chrX 22868112 intron CG42346 + chrX_8_22865001 chrX_22865001 RAL-913 5312 chrX 22867955 22868008 chrX 22868092 22868173 19 166 4.0 3.5 3.8 4.0 218 chrX 22867955 exon CG42346 + chrX 22868064 intron CG42346 + chrX 22868173 intron CG42346 + chrX_19_22865001 chrX_22865001 RAL-913 5313 chrX 22870824 22870895 chrX 22870964 22871031 9 137 7.0 6.0 6.5 1.2 207 chrX 22870824 intron,3` UTR CG42346 +,CR43656 - chrX 22870928 intron,3` UTR CG42346 +,CR43656 - chrX 22871031 intron,3` UTR CG42346 +,CR43656 - chrX_9_22870001 chrX_22870001 RAL-913 5314 chrX 22895686 22895759 chrX 22895854 22895902 26 162 5.5 6.0 5.8 3.8 216 chrX 22895686 intergenic not near genes chrX 22895794 intergenic not near genes chrX 22895902 intergenic not near genes chrX_26_22895001 chrX_22895001 RAL-913 5315 chrX 22967345 22967364 chrX 23154546 23154560 diver 4 187200 16.0 29.0 22.5 0.2 187215 chrX 22967345 intergenic not near genes chrX 23060952 intergenic not near genes chrX 23154560 intergenic not near genes chrX_4_23060001 chrX_23060001 RAL-913 5316 chrX 22987065 22987123 chrX 22989774 22989832 Burdock 20 2706 5.5 10.0 7.8 2.3 2767 chrX 22987065 intron,intron stnA -,stnB - chrX 22988448 intron,intron stnA -,stnB - chrX 22989832 intron,intron stnA -,stnB - chrX_20_22985001 chrX_22985001 RAL-913 5317 chrX 22996267 22996329 chrX 23003551 23003613 roo 30 7283 5.0 6.0 5.5 4.6 7346 chrX 22996267 intron,intron stnA -,stnB - chrX 22999940 intron,intron stnA -,stnB - chrX 23003613 intron,intron stnA -,stnB - chrX_30_22995001 chrX_22995001 RAL-913 5318 chrY 864673 864733 chrY 864800 864859 8 126 44.5 43.5 44.0 0.2 186 chrY 864673 intergenic not near genes chrY 864766 intergenic not near genes chrY 864859 intergenic not near genes chrY_8_860001 chrY_860001 RAL-913 5319 chrY 975600 975819 chrY 975767 976032 17 178 196.0 167.0 181.5 0.1 432 chrY 975600 intergenic not near genes chrY 975816 intergenic not near genes chrY 976032 intergenic not near genes chrY_17_975001 chrY_975001 RAL-913 5320 chrY 1419859 1419884 chrY 1420163 1420188 12 304 26.0 26.0 26.0 0.4 329 chrY 1419859 intergenic not near genes chrY 1420024 intergenic not near genes chrY 1420188 intergenic not near genes chrY_12_1420001 chrY_1420001 RAL-913 5321 chrY 1420584 1420650 chrY 1420743 1420776 4 151 24.0 25.0 24.5 0.2 192 chrY 1420584 intergenic not near genes chrY 1420680 intergenic not near genes chrY 1420776 intergenic not near genes chrY_4_1420001 chrY_1420001 RAL-913 5322 chrY 1445411 1445434 chrY 1447399 1447414 7 1981 41.0 19.0 30.0 0.2 2003 chrY 1445411 intergenic not near genes chrY 1446412 intergenic not near genes chrY 1447414 intergenic not near genes chrY_7_1445001 chrY_1445001 RAL-913 5323 chrY 3561959 3562027 chrY 3562092 3562160 4 133 9.0 8.5 8.8 0.4 201 chrY 3561959 intergenic not near genes chrY 3562060 intergenic not near genes chrY 3562160 intergenic not near genes chrY_4_3560001 chrY_3560001 RAL-913 5324 chrY 3664557 3664612 chrY 3664710 3664748 6 150 0.5 2.0 1.2 2.7 191 chrY 3664557 intergenic CG40948 + chrY 3664652 intergenic CG40948 + chrY 3664748 intergenic CG40948 + chrY_6_3660001 chrY_3660001 RAL-913 5325 chrY 3664953 3665005 chrY 3665107 3665154 4 153 3.5 3.0 3.2 1.0 201 chrY 3664953 intergenic CG40948 + chrY 3665054 intergenic CG40948 + chrY 3665154 intergenic not near genes chrY_4_3665001 chrY_3665001 RAL-913 5326 chrY 3666391 3666452 chrY 3666588 3666655 8 198 1.5 2.5 2.0 2.7 264 chrY 3666391 intergenic not near genes chrY 3666523 intergenic not near genes chrY 3666655 intergenic not near genes chrY_8_3665001 chrY_3665001 RAL-913