SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 73775 73813 chr2L 73904 73912 5 122 2.0 2.5 2.2 1.6 137 chr2L 73775 3` UTR,intron CR44987 -,galectin + chr2L 73844 intron galectin + chr2L 73912 intron galectin + chr2L_5_70001 chr2L_70001 RAL-911 2 chr2L 172053 172085 chr2L 172154 172186 4 101 5.5 5.0 5.2 0.6 133 chr2L 172053 intron spen + chr2L 172120 intron spen + chr2L 172186 intron spen + chr2L_4_170001 chr2L_170001 RAL-911 3 chr2L 262723 262766 chr2L 262811 262861 9 88 0.0 3.5 1.8 3.2 138 chr2L 262723 intron,3` UTR,5` UTR CG3645 -,CG17075 -,CR44219 + chr2L 262792 intron,3` UTR,5` UTR CG3645 -,CG17075 -,CR44219 + chr2L 262861 intron,3` UTR,5` UTR CG3645 -,CG17075 -,CR44219 + chr2L_9_260001 chr2L_260001 RAL-911 4 chr2L 263286 263319 chr2L 263448 263485 8 165 3.5 4.5 4.0 1.6 199 chr2L 263286 intron,3` UTR CG3645 -,CG17075 - chr2L 263386 intron,3` UTR CG3645 -,CG17075 - chr2L 263485 intron,3` UTR CG3645 -,CG17075 - chr2L_8_260001 chr2L_260001 RAL-911 5 chr2L 314277 314315 chr2L 314383 314384 5 99 3.5 1.0 2.2 1.6 107 chr2L 314277 intron Plc21C + chr2L 314330 intron Plc21C + chr2L 314384 intron Plc21C + chr2L_5_310001 chr2L_310001 RAL-911 6 chr2L 316710 316739 chr2L 316791 316795 11 85 2.0 2.5 2.2 3.4 85 chr2L 316710 intron Plc21C + chr2L 316752 intron Plc21C + chr2L 316795 intron Plc21C + chr2L_11_315001 chr2L_315001 RAL-911 7 chr2L 325135 325151 chr2L 325216 325222 4 80 6.5 7.0 6.8 0.5 87 chr2L 325135 intron Plc21C + chr2L 325178 intron Plc21C + chr2L 325222 intron Plc21C + chr2L_4_325001 chr2L_325001 RAL-911 8 chr2L 347869 347918 chr2L 355389 355431 blood 6 7516 4.5 4.5 4.5 1.1 7562 chr2L 347869 3` UTR Plc21C + chr2L 351650 intron Plc21C + chr2L 355431 3` UTR Plc21C + chr2L_6_350001 chr2L_350001 RAL-911 9 chr2L 371431 371452 chr2L 371528 371551 7 99 3.5 7.5 5.5 1.1 120 chr2L 371431 intergenic not near genes chr2L 371491 intergenic not near genes chr2L 371551 intergenic not near genes chr2L_7_370001 chr2L_370001 RAL-911 10 chr2L 388557 388607 chr2L 388745 388791 9 187 3.0 3.0 3.0 2.2 234 chr2L 388557 intergenic not near genes chr2L 388674 intergenic not near genes chr2L 388791 intergenic not near genes chr2L_9_385001 chr2L_385001 RAL-911 11 chr2L 736521 736549 chr2L 736789 736826 8 275 3.5 2.5 3.0 2.0 305 chr2L 736521 intergenic not near genes chr2L 736674 intergenic not near genes chr2L 736826 intergenic Eaat2 - chr2L_8_735001 chr2L_735001 RAL-911 12 chr2L 849453 849483 chr2L 849564 849589 10 108 2.0 3.0 2.5 2.9 136 chr2L 849453 intron drongo - chr2L 849521 intron drongo - chr2L 849589 intron drongo - chr2L_10_845001 chr2L_845001 RAL-911 13 chr2L 877826 877878 chr2L 877927 877964 5 92 1.5 2.0 1.8 1.8 138 chr2L 877826 3` UTR,exon CG15824 -,ninaA + chr2L 877895 3` UTR,intron CG15824 -,ninaA + chr2L 877964 3` UTR,intron CG15824 -,ninaA + chr2L_5_875001 chr2L_875001 RAL-911 14 chr2L 964540 964570 chr2L 964644 964674 8 102 3.5 1.5 2.5 2.3 134 chr2L 964540 intergenic not near genes chr2L 964607 intergenic not near genes chr2L 964674 intergenic not near genes chr2L_8_960001 chr2L_960001 RAL-911 15 chr2L 996712 996746 chr2L 1005827 1005854 roo 4 9113 0.0 3.0 1.5 1.6 9142 chr2L 996712 intergenic not near genes chr2L 1001283 intergenic not near genes chr2L 1005854 intergenic not near genes chr2L_4_1000001 chr2L_1000001 RAL-911 16 chr2L 1035539 1035587 chr2L 1035636 1035684 6 95 4.0 0.5 2.2 1.9 145 chr2L 1035539 intron IA-2 - chr2L 1035612 intron IA-2 - chr2L 1035684 intron IA-2 - chr2L_6_1035001 chr2L_1035001 RAL-911 17 chr2L 1137633 1137683 chr2L 1137833 1137883 11 193 4.0 4.5 4.2 2.1 250 chr2L 1137633 intron CG4577 + chr2L 1137758 intron CG4577 + chr2L 1137883 intron CG4577 + chr2L_11_1135001 chr2L_1135001 RAL-911 18 chr2L 1164237 1164280 chr2L 1164335 1164386 8 104 2.0 1.5 1.8 2.9 149 chr2L 1164237 intergenic IntS14 +,CG5080 - chr2L 1164312 intergenic IntS14 +,CG5080 - chr2L 1164386 intergenic IntS14 +,CG5080 - chr2L_8_1160001 chr2L_1160001 RAL-911 19 chr2L 1220112 1220158 chr2L 1227598 1227644 blood 8 7484 4.0 2.5 3.2 1.9 7532 chr2L 1220112 intron CG42329 + chr2L 1223878 intron CG42329 + chr2L 1227644 intron CG42329 + chr2L_8_1220001 chr2L_1220001 RAL-911 20 chr2L 1301751 1301785 chr2L 1302298 1302362 gypsy 4 569 0.0 0.0 0.0 4.0 611 chr2L 1301751 intergenic not near genes chr2L 1302056 intergenic not near genes chr2L 1302362 intergenic not near genes chr2L_4_1300001 chr2L_1300001 RAL-911 21 chr2L 1436616 1436657 chr2L 1436711 1436762 6 101 1.0 2.5 1.8 2.1 146 chr2L 1436616 intergenic not near genes chr2L 1436689 intergenic not near genes chr2L 1436762 intergenic not near genes chr2L_6_1435001 chr2L_1435001 RAL-911 22 chr2L 1508025 1508272 chr2L 1508129 1508346 12 93 1.5 2.5 2.0 4.0 321 chr2L 1508025 intergenic not near genes chr2L 1508186 intergenic not near genes chr2L 1508346 intergenic not near genes chr2L_12_1505001 chr2L_1505001 RAL-911 23 chr2L 1570673 1570720 chr2L 1573565 1573608 F-element 11 2891 4.0 0.5 2.2 3.4 2935 chr2L 1570673 intron haf + chr2L 1572140 intron haf + chr2L 1573608 intron haf + chr2L_11_1570001 chr2L_1570001 RAL-911 24 chr2L 1590941 1590983 chr2L 1591037 1591038 10 86 7.0 3.5 5.2 1.6 97 chr2L 1590941 intron haf + chr2L 1590990 intron haf + chr2L 1591038 intron haf + chr2L_10_1590001 chr2L_1590001 RAL-911 25 chr2L 1611204 1611214 chr2L 1611313 1611323 5 108 1.5 0.0 0.8 2.8 119 chr2L 1611204 intergenic CG31935 -,CG14352 + chr2L 1611264 intergenic CG31935 -,CG14352 + chr2L 1611323 intergenic CG14352 +,CG31935 - chr2L_5_1610001 chr2L_1610001 RAL-911 26 chr2L 1615383 1615405 chr2L 1615485 1615506 4 100 0.5 1.0 0.8 2.2 123 chr2L 1615383 intergenic not near genes chr2L 1615444 intergenic not near genes chr2L 1615506 intergenic not near genes chr2L_4_1615001 chr2L_1615001 RAL-911 27 chr2L 1662009 1662021 chr2L 1662114 1662126 6 105 3.5 0.0 1.8 2.1 117 chr2L 1662009 intron chinmo + chr2L 1662068 intron chinmo + chr2L 1662126 intron chinmo + chr2L_6_1660001 chr2L_1660001 RAL-911 28 chr2L 1678958 1679003 chr2L 1686443 1686487 blood 11 7485 3.5 4.0 3.8 2.3 7529 chr2L 1678958 intron chinmo + chr2L 1682722 intron chinmo + chr2L 1686487 intron chinmo + chr2L_11_1680001 chr2L_1680001 RAL-911 29 chr2L 1724785 1724839 chr2L 1724887 1724928 8 97 6.0 4.0 5.0 1.3 143 chr2L 1724785 3` UTR Eno - chr2L 1724856 3` UTR Eno - chr2L 1724928 3` UTR Eno - chr2L_8_1720001 chr2L_1720001 RAL-911 30 chr2L 1736013 1736038 chr2L 1736135 1736136 8 120 2.0 2.0 2.0 2.7 123 chr2L 1736013 intron CG17646 + chr2L 1736074 intron CG17646 + chr2L 1736136 intron CG17646 + chr2L_8_1735001 chr2L_1735001 RAL-911 31 chr2L 1761994 1762041 chr2L 1762098 1762145 4 102 2.0 4.0 3.0 1.0 151 chr2L 1761994 intergenic not near genes chr2L 1762070 intergenic not near genes chr2L 1762145 intergenic not near genes chr2L_4_1760001 chr2L_1760001 RAL-911 32 chr2L 1883396 1883445 chr2L 1883999 1884045 6 600 2.5 1.5 2.0 2.0 649 chr2L 1883396 intron CG15358 - chr2L 1883720 intron CG15358 - chr2L 1884045 exon CG15358 - chr2L_6_1880001 chr2L_1880001 RAL-911 33 chr2L 1993188 1993228 chr2L 1993293 1993334 7 103 5.0 1.5 3.2 1.7 146 chr2L 1993188 intergenic not near genes chr2L 1993261 intergenic not near genes chr2L 1993334 intergenic not near genes chr2L_7_1990001 chr2L_1990001 RAL-911 34 chr2L 2007835 2007870 chr2L 2007963 2007998 13 127 1.0 1.0 1.0 6.5 163 chr2L 2007835 intergenic CR45712 + chr2L 2007916 intergenic CR45712 +,Nplp4 + chr2L 2007998 intergenic CR45712 +,Nplp4 + chr2L_13_2005001 chr2L_2005001 RAL-911 35 chr2L 2010484 2010514 chr2L 2010607 2010634 7 122 1.0 5.0 3.0 1.8 150 chr2L 2010484 intron CG4238 + chr2L 2010559 intron CG4238 + chr2L 2010634 intron CG4238 + chr2L_7_2010001 chr2L_2010001 RAL-911 36 chr2L 2260800 2260814 chr2L 2260898 2260919 5 104 3.5 0.5 2.0 1.7 119 chr2L 2260800 intergenic not near genes chr2L 2260860 intergenic not near genes chr2L 2260919 intergenic not near genes chr2L_5_2260001 chr2L_2260001 RAL-911 37 chr2L 2364076 2364100 chr2L 2364171 2364177 6 90 3.5 2.0 2.8 1.6 101 chr2L 2364076 intron Rab5 - chr2L 2364126 intron Rab5 - chr2L 2364177 intron Rab5 - chr2L_6_2360001 chr2L_2360001 RAL-911 38 chr2L 2392141 2392169 chr2L 2392271 2392297 4 130 8.0 1.5 4.8 0.7 156 chr2L 2392141 intron VGlut + chr2L 2392219 intron VGlut + chr2L 2392297 intron VGlut + chr2L_4_2390001 chr2L_2390001 RAL-911 39 chr2L 2525725 2525750 chr2L 2526007 2526032 10 282 0.5 2.0 1.2 4.5 307 chr2L 2525725 intergenic not near genes chr2L 2525878 intergenic not near genes chr2L 2526032 intergenic not near genes chr2L_10_2525001 chr2L_2525001 RAL-911 40 chr2L 2557199 2557211 chr2L 2557295 2557307 4 96 2.5 5.5 4.0 0.8 108 chr2L 2557199 intergenic not near genes chr2L 2557253 intergenic not near genes chr2L 2557307 intergenic not near genes chr2L_4_2555001 chr2L_2555001 RAL-911 41 chr2L 2557831 2557846 chr2L 2557932 2557946 5 100 0.0 7.5 3.8 1.0 115 chr2L 2557831 intergenic not near genes chr2L 2557888 intergenic not near genes chr2L 2557946 intergenic not near genes chr2L_5_2555001 chr2L_2555001 RAL-911 42 chr2L 2618021 2618068 chr2L 2618120 2618142 7 90 1.5 3.0 2.2 2.2 121 chr2L 2618021 intergenic not near genes chr2L 2618082 intergenic not near genes chr2L 2618142 intergenic not near genes chr2L_7_2615001 chr2L_2615001 RAL-911 43 chr2L 2687302 2687330 chr2L 2687401 2687427 7 99 2.5 1.0 1.8 2.5 125 chr2L 2687302 intron CG31690 + chr2L 2687364 intron CG31690 + chr2L 2687427 intron CG31690 + chr2L_7_2685001 chr2L_2685001 RAL-911 44 chr2L 2724395 2724437 chr2L 2724480 2724533 13 92 1.5 2.5 2.0 4.3 138 chr2L 2724395 intergenic not near genes chr2L 2724464 intergenic not near genes chr2L 2724533 intergenic not near genes chr2L_13_2720001 chr2L_2720001 RAL-911 45 chr2L 2772600 2772611 chr2L 2779197 2779213 297 4 6600 5.0 4.5 4.8 0.7 6613 chr2L 2772600 3` UTR Syt1 - chr2L 2775906 intron Syt1 - chr2L 2779213 3` UTR Syt1 - chr2L_4_2775001 chr2L_2775001 RAL-911 46 chr2L 2885354 2885396 chr2L 2885451 2885493 15 96 4.0 4.0 4.0 3.0 139 chr2L 2885354 intron NTPase - chr2L 2885424 intron NTPase - chr2L 2885493 intron NTPase - chr2L_15_2885001 chr2L_2885001 RAL-911 47 chr2L 2909883 2909923 chr2L 2909985 2910026 6 101 2.0 4.5 3.2 1.4 143 chr2L 2909883 intron lilli + chr2L 2909954 intron lilli + chr2L 2910026 intron lilli + chr2L_6_2905001 chr2L_2905001 RAL-911 48 chr2L 3073020 3073060 chr2L 3078243 3078283 copia 12 5221 2.0 7.5 4.8 2.1 5263 chr2L 3073020 intron toc - chr2L 3075652 intron toc - chr2L 3078283 intron toc - chr2L_12_3075001 chr2L_3075001 RAL-911 49 chr2L 3147260 3147299 chr2L 3147352 3147377 4 82 2.0 0.5 1.2 1.8 117 chr2L 3147260 3` UTR Mad - chr2L 3147318 3` UTR Mad - chr2L 3147377 3` UTR Mad - chr2L_4_3145001 chr2L_3145001 RAL-911 50 chr2L 3192199 3192228 chr2L 3192330 3192344 8 127 1.0 2.5 1.8 2.9 145 chr2L 3192199 exon CG34393 - chr2L 3192272 intron CG34393 - chr2L 3192344 intron CG34393 - chr2L_8_3190001 chr2L_3190001 RAL-911 51 chr2L 3202718 3202770 chr2L 3210167 3210219 mdg1 13 7449 1.5 0.5 1.0 6.5 7501 chr2L 3202718 intergenic not near genes chr2L 3206468 intergenic not near genes chr2L 3210219 intergenic CR45336 + chr2L_13_3205001 chr2L_3205001 RAL-911 52 chr2L 3251479 3251492 chr2L 3259064 3259076 springer 4 7583 8.0 1.5 4.8 0.7 7597 chr2L 3251479 intergenic not near genes chr2L 3255278 intergenic not near genes chr2L 3259076 intergenic not near genes chr2L_4_3255001 chr2L_3255001 RAL-911 53 chr2L 3272958 3272969 chr2L 3273053 3273065 5 96 1.5 5.0 3.2 1.2 107 chr2L 3272958 intergenic not near genes chr2L 3273012 intergenic not near genes chr2L 3273065 intergenic not near genes chr2L_5_3270001 chr2L_3270001 RAL-911 54 chr2L 3312079 3312109 chr2L 3312191 3312223 5 118 0.0 0.5 0.2 4.2 144 chr2L 3312079 intron CG3277 + chr2L 3312151 intron CG3277 + chr2L 3312223 intron CG3277 + chr2L_5_3310001 chr2L_3310001 RAL-911 55 chr2L 3314683 3314729 chr2L 3314780 3314826 13 96 3.5 2.5 3.0 3.2 143 chr2L 3314683 intron CG3277 + chr2L 3314754 intron CG3277 + chr2L 3314826 intron CG3277 + chr2L_13_3310001 chr2L_3310001 RAL-911 56 chr2L 3366993 3367031 chr2L 3367163 3367201 6 166 7.0 2.5 4.8 1.0 208 chr2L 3366993 intron CG34394 - chr2L 3367097 intron CG34394 - chr2L 3367201 intron CG34394 - chr2L_6_3365001 chr2L_3365001 RAL-911 57 chr2L 3388604 3388618 chr2L 3388848 3388879 pogo 6 253 1.5 3.0 2.2 1.9 275 chr2L 3388604 intergenic CG42460 - chr2L 3388742 intergenic CG42460 - chr2L 3388879 intergenic CG42460 -,CR44791 + chr2L_6_3385001 chr2L_3385001 RAL-911 58 chr2L 3393810 3393817 chr2L 3393873 3393918 4 80 2.0 3.0 2.5 1.1 108 chr2L 3393810 intergenic not near genes chr2L 3393864 intergenic not near genes chr2L 3393918 intergenic not near genes chr2L_4_3390001 chr2L_3390001 RAL-911 59 chr2L 3395006 3395041 chr2L 3395108 3395113 11 95 1.0 3.5 2.2 3.4 107 chr2L 3395006 intergenic not near genes chr2L 3395060 intergenic not near genes chr2L 3395113 intergenic not near genes chr2L_11_3395001 chr2L_3395001 RAL-911 60 chr2L 3612437 3612441 chr2L 3612564 3612573 5 129 0.0 7.5 3.8 1.0 136 chr2L 3612437 intergenic not near genes chr2L 3612505 intergenic not near genes chr2L 3612573 intergenic not near genes chr2L_5_3610001 chr2L_3610001 RAL-911 61 chr2L 3649795 3649810 chr2L 3654988 3655032 copia 5 5212 1.0 3.0 2.0 1.7 5237 chr2L 3649795 intron for - chr2L 3652414 intron for - chr2L 3655032 intron for - chr2L_5_3650001 chr2L_3650001 RAL-911 62 chr2L 3693824 3693837 chr2L 3693902 3693927 4 86 1.0 0.5 0.8 2.2 103 chr2L 3693824 exon Acp24A4 - chr2L 3693876 5` UTR Acp24A4 - chr2L 3693927 intergenic Acp24A4 - chr2L_4_3690001 chr2L_3690001 RAL-911 63 chr2L 3790347 3790383 chr2L 3790466 3790499 15 118 2.0 1.5 1.8 5.4 152 chr2L 3790347 intron CG3921 + chr2L 3790423 intron CG3921 + chr2L 3790499 intron CG3921 + chr2L_15_3790001 chr2L_3790001 RAL-911 64 chr2L 3816948 3816980 chr2L 3817121 3817130 7 178 2.5 1.0 1.8 2.5 182 chr2L 3816948 intergenic not near genes chr2L 3817039 intergenic not near genes chr2L 3817130 intergenic not near genes chr2L_7_3815001 chr2L_3815001 RAL-911 65 chr2L 3819013 3819058 chr2L 3819115 3819159 6 99 1.0 0.0 0.5 4.0 146 chr2L 3819013 intergenic CR44077 + chr2L 3819086 intergenic not near genes chr2L 3819159 intergenic not near genes chr2L_6_3815001 chr2L_3815001 RAL-911 66 chr2L 3821054 3821071 chr2L 3821150 3821161 4 94 3.5 0.0 1.8 1.4 107 chr2L 3821054 intergenic not near genes chr2L 3821108 intergenic not near genes chr2L 3821161 intergenic not near genes chr2L_4_3820001 chr2L_3820001 RAL-911 67 chr2L 3831819 3831852 chr2L 3831919 3831953 10 101 2.0 6.0 4.0 2.0 134 chr2L 3831819 intergenic not near genes chr2L 3831886 intergenic not near genes chr2L 3831953 intergenic not near genes chr2L_10_3830001 chr2L_3830001 RAL-911 68 chr2L 4037786 4037809 chr2L 4037893 4037916 14 107 3.0 3.5 3.2 3.3 130 chr2L 4037786 intron ed + chr2L 4037851 intron ed + chr2L 4037916 intron ed + chr2L_14_4035001 chr2L_4035001 RAL-911 69 chr2L 4066045 4066060 chr2L 4068869 4068905 Juan 4 2839 1.5 0.5 1.0 2.0 2860 chr2L 4066045 intron ed + chr2L 4067475 intron ed + chr2L 4068905 intron ed + chr2L_4_4065001 chr2L_4065001 RAL-911 70 chr2L 4152252 4152252 chr2L 16217660 16217660 4 12065408 5.5 16.5 11.0 0.3 12065408 chr2L 4152252 intergenic not near genes chr2L 10184956 exon Sur - chr2L 16217660 intergenic not near genes chr2L_4_10180001 chr2L_10180001 RAL-911 71 chr2L 4159388 4159436 chr2L 4159608 4159656 11 217 2.0 1.5 1.8 3.9 268 chr2L 4159388 intergenic not near genes chr2L 4159522 intergenic not near genes chr2L 4159656 intergenic not near genes chr2L_11_4155001 chr2L_4155001 RAL-911 72 chr2L 4351453 4351500 chr2L 4351549 4351594 9 89 1.0 1.0 1.0 4.5 141 chr2L 4351453 intergenic CR44700 + chr2L 4351524 intergenic CR44700 + chr2L 4351594 intergenic CR44700 + chr2L_9_4350001 chr2L_4350001 RAL-911 73 chr2L 4356617 4356654 chr2L 4356716 4356753 11 98 0.0 1.5 0.8 6.1 136 chr2L 4356617 intergenic not near genes chr2L 4356685 intergenic not near genes chr2L 4356753 intergenic not near genes chr2L_11_4355001 chr2L_4355001 RAL-911 74 chr2L 4386127 4386154 chr2L 4386254 4386276 5 126 0.0 4.5 2.2 1.6 149 chr2L 4386127 intergenic Psf2 -,CG3338 - chr2L 4386202 3` UTR Psf2 - chr2L 4386276 3` UTR Psf2 - chr2L_5_4385001 chr2L_4385001 RAL-911 75 chr2L 4492004 4492019 chr2L 4492152 4492197 5 171 5.5 2.0 3.8 1.0 193 chr2L 4492004 intron dp - chr2L 4492100 intron dp - chr2L 4492197 intron dp - chr2L_5_4490001 chr2L_4490001 RAL-911 76 chr2L 4601685 4601705 chr2L 4609145 4609151 mdg1 4 7456 1.0 2.0 1.5 1.6 7466 chr2L 4601685 intron dp - chr2L 4605418 intron dp - chr2L 4609151 intron dp - chr2L_4_4605001 chr2L_4605001 RAL-911 77 chr2L 4601715 4601730 chr2L 4609144 4609163 mdg1 6 7450 1.0 2.0 1.5 2.4 7448 chr2L 4601715 intron dp - chr2L 4605439 intron dp - chr2L 4609163 intron dp - chr2L_6_4605001 chr2L_4605001 RAL-911 78 chr2L 4793290 4793313 chr2L 4793605 4793628 5 312 4.5 0.5 2.5 1.4 338 chr2L 4793290 intron CG15630 - chr2L 4793459 intron CG15630 - chr2L 4793628 intron CG15630 - chr2L_5_4790001 chr2L_4790001 RAL-911 79 chr2L 4803874 4803905 chr2L 4803973 4804009 6 102 2.0 3.0 2.5 1.7 135 chr2L 4803874 intergenic not near genes chr2L 4803942 intergenic not near genes chr2L 4804009 intergenic not near genes chr2L_6_4800001 chr2L_4800001 RAL-911 80 chr2L 4819503 4819511 chr2L 4819639 4819643 4 138 2.5 5.0 3.8 0.8 140 chr2L 4819503 intergenic not near genes chr2L 4819573 intergenic not near genes chr2L 4819643 intergenic not near genes chr2L_4_4815001 chr2L_4815001 RAL-911 81 chr2L 4901118 4901158 chr2L 4901240 4901272 8 116 0.0 3.0 1.5 3.2 154 chr2L 4901118 intron CG3036 + chr2L 4901195 intron CG3036 + chr2L 4901272 intron CG3036 + chr2L_8_4900001 chr2L_4900001 RAL-911 82 chr2L 4918156 4918194 chr2L 4923249 4923287 jockey 11 5093 5.5 8.0 6.8 1.4 5131 chr2L 4918156 intron hoe1 - chr2L 4920722 intron hoe1 - chr2L 4923287 intron hoe1 - chr2L_11_4920001 chr2L_4920001 RAL-911 83 chr2L 5027968 5027985 chr2L 5028051 5028089 5 95 0.5 4.0 2.2 1.6 121 chr2L 5027968 intron vkg - chr2L 5028028 intron vkg - chr2L 5028089 intron vkg - chr2L_5_5025001 chr2L_5025001 RAL-911 84 chr2L 5085025 5085070 chr2L 5085137 5085169 7 103 0.0 3.0 1.5 2.8 144 chr2L 5085025 intron pgant5 - chr2L 5085097 intron pgant5 - chr2L 5085169 intron pgant5 - chr2L_7_5085001 chr2L_5085001 RAL-911 85 chr2L 5092393 5092443 chr2L 5092500 5092550 8 107 2.0 5.5 3.8 1.7 157 chr2L 5092393 intron pgant5 - chr2L 5092472 intron pgant5 - chr2L 5092550 intron pgant5 - chr2L_8_5090001 chr2L_5090001 RAL-911 86 chr2L 5117278 5117325 chr2L 5117380 5117422 9 101 4.0 2.0 3.0 2.2 144 chr2L 5117278 intron Msp300 + chr2L 5117350 intron Msp300 + chr2L 5117422 intron Msp300 + chr2L_9_5115001 chr2L_5115001 RAL-911 87 chr2L 5120954 5121002 chr2L 5121068 5121116 5 113 3.0 1.0 2.0 1.7 162 chr2L 5120954 intron Msp300 + chr2L 5121035 intron Msp300 + chr2L 5121116 intron Msp300 + chr2L_5_5120001 chr2L_5120001 RAL-911 88 chr2L 5342752 5342799 chr2L 5345152 5345199 Doc 7 2395 1.5 6.5 4.0 1.4 2447 chr2L 5342752 intergenic not near genes chr2L 5343976 intergenic not near genes chr2L 5345199 intergenic not near genes chr2L_7_5340001 chr2L_5340001 RAL-911 89 chr2L 5475140 5475155 chr2L 5475264 5475280 4 124 1.5 0.0 0.8 2.2 140 chr2L 5475140 intergenic not near genes chr2L 5475210 intergenic not near genes chr2L 5475280 intergenic not near genes chr2L_4_5475001 chr2L_5475001 RAL-911 90 chr2L 5488001 5488036 chr2L 5488101 5488136 7 100 1.5 4.5 3.0 1.8 135 chr2L 5488001 intergenic not near genes chr2L 5488068 intergenic not near genes chr2L 5488136 intergenic not near genes chr2L_7_5485001 chr2L_5485001 RAL-911 91 chr2L 5516653 5516656 chr2L 5516742 5516755 4 96 6.5 5.5 6.0 0.6 102 chr2L 5516653 intergenic not near genes chr2L 5516704 intergenic not near genes chr2L 5516755 intergenic not near genes chr2L_4_5515001 chr2L_5515001 RAL-911 92 chr2L 5516657 5516686 chr2L 5516740 5516785 12 98 2.5 5.0 3.8 2.5 128 chr2L 5516657 intergenic not near genes chr2L 5516721 intergenic not near genes chr2L 5516785 intergenic not near genes chr2L_12_5515001 chr2L_5515001 RAL-911 93 chr2L 5546578 5546625 chr2L 5546684 5546731 15 105 2.5 1.5 2.0 5.0 153 chr2L 5546578 3` UTR Lam + chr2L 5546654 intergenic Lam +,Oscillin + chr2L 5546731 intergenic Lam +,Oscillin + chr2L_15_5545001 chr2L_5545001 RAL-911 94 chr2L 5652818 5652838 chr2L 5652914 5652934 5 96 2.0 0.0 1.0 2.5 116 chr2L 5652818 intron CG31646 - chr2L 5652876 intron CG31646 - chr2L 5652934 intron CG31646 - chr2L_5_5650001 chr2L_5650001 RAL-911 95 chr2L 5695866 5695887 chr2L 5695957 5695999 5 105 1.0 6.0 3.5 1.1 133 chr2L 5695866 intergenic not near genes chr2L 5695932 intergenic not near genes chr2L 5695999 intergenic not near genes chr2L_5_5695001 chr2L_5695001 RAL-911 96 chr2L 5826032 5826040 chr2L 5826134 5826142 5 102 8.0 2.5 5.2 0.8 110 chr2L 5826032 intron TrissinR + chr2L 5826087 intron TrissinR + chr2L 5826142 intron TrissinR + chr2L_5_5825001 chr2L_5825001 RAL-911 97 chr2L 5826050 5826073 chr2L 5826133 5826150 4 85 3.5 2.5 3.0 1.0 100 chr2L 5826050 intron TrissinR + chr2L 5826100 intron TrissinR + chr2L 5826150 intron TrissinR + chr2L_4_5825001 chr2L_5825001 RAL-911 98 chr2L 5827716 5827729 chr2L 5836718 5836743 roo 9 9010 3.5 2.5 3.0 2.2 9027 chr2L 5827716 intron TrissinR + chr2L 5832230 intron TrissinR + chr2L 5836743 intron TrissinR + chr2L_9_5830001 chr2L_5830001 RAL-911 99 chr2L 5926253 5926454 chr2L 5926353 5926562 5 145 0.0 0.0 0.0 5.0 309 chr2L 5926253 intron dsf + chr2L 5926408 intron dsf + chr2L 5926562 intron dsf + chr2L_5_5925001 chr2L_5925001 RAL-911 100 chr2L 5931304 5931332 chr2L 5931436 5931464 10 132 3.0 3.0 3.0 2.5 160 chr2L 5931304 intron dsf + chr2L 5931384 intron dsf + chr2L 5931464 intron dsf + chr2L_10_5930001 chr2L_5930001 RAL-911 101 chr2L 6308310 6308334 chr2L 6308413 6308436 6 103 6.0 1.0 3.5 1.3 126 chr2L 6308310 intron Ddr + chr2L 6308373 intron Ddr + chr2L 6308436 intron,3` UTR Ddr +,CG43922 - chr2L_6_6305001 chr2L_6305001 RAL-911 102 chr2L 6363145 6363175 chr2L 6366070 6366116 Burdock 6 2931 3.5 2.5 3.0 1.5 2971 chr2L 6363145 intergenic not near genes chr2L 6364630 intergenic not near genes chr2L 6366116 intergenic not near genes chr2L_6_6360001 chr2L_6360001 RAL-911 103 chr2L 6426836 6426885 chr2L 6445116 6445161 roo 7 18275 3.5 3.0 3.2 1.7 18325 chr2L 6426836 3` UTR CG9527 - chr2L 6435998 intron CG9527 - chr2L 6445161 exon CG9527 - chr2L_7_6435001 chr2L_6435001 RAL-911 104 chr2L 6453585 6453630 chr2L 6453686 6453730 10 99 2.5 1.5 2.0 3.3 145 chr2L 6453585 intron retm - chr2L 6453658 intron retm - chr2L 6453730 intron retm - chr2L_10_6450001 chr2L_6450001 RAL-911 105 chr2L 6544354 6544394 chr2L 6544466 6544506 13 111 3.5 5.0 4.2 2.5 152 chr2L 6544354 intron eya - chr2L 6544430 intron eya - chr2L 6544506 intron eya - chr2L_13_6540001 chr2L_6540001 RAL-911 106 chr2L 6626885 6626918 chr2L 6626989 6627020 5 104 3.5 3.5 3.5 1.1 135 chr2L 6626885 intron Oatp26F - chr2L 6626952 intron Oatp26F - chr2L 6627020 intron Oatp26F - chr2L_5_6625001 chr2L_6625001 RAL-911 107 chr2L 6891438 6891448 chr2L 6891542 6891554 6 108 6.5 2.5 4.5 1.1 116 chr2L 6891438 intron Nlg2 + chr2L 6891496 intron Nlg2 + chr2L 6891554 intron Nlg2 + chr2L_6_6890001 chr2L_6890001 RAL-911 108 chr2L 6950140 6950192 chr2L 6950365 6950417 8 217 2.5 2.0 2.2 2.5 277 chr2L 6950140 5` UTR Gas41 - chr2L 6950278 intergenic Gas41 -,SA + chr2L 6950417 intergenic SA +,Gas41 - chr2L_8_6950001 chr2L_6950001 RAL-911 109 chr2L 6969265 6969299 chr2L 6969360 6969399 7 95 0.5 4.0 2.2 2.2 134 chr2L 6969265 3` UTR snRNP-U1-70K - chr2L 6969332 3` UTR snRNP-U1-70K - chr2L 6969399 3` UTR snRNP-U1-70K - chr2L_7_6965001 chr2L_6965001 RAL-911 110 chr2L 7081693 7081722 chr2L 7081794 7081823 4 101 3.5 3.5 3.5 0.9 130 chr2L 7081693 intron Pvf2 - chr2L 7081758 intron Pvf2 - chr2L 7081823 intron Pvf2 - chr2L_4_7080001 chr2L_7080001 RAL-911 111 chr2L 7082876 7082899 chr2L 7082983 7082987 10 105 3.0 4.5 3.8 2.1 111 chr2L 7082876 intron Pvf2 - chr2L 7082932 intron Pvf2 - chr2L 7082987 intron Pvf2 - chr2L_10_7080001 chr2L_7080001 RAL-911 112 chr2L 7126823 7126855 chr2L 7126933 7126965 11 109 6.0 0.0 3.0 2.8 142 chr2L 7126823 intron Pvf3 - chr2L 7126894 intron Pvf3 - chr2L 7126965 intron Pvf3 - chr2L_11_7125001 chr2L_7125001 RAL-911 113 chr2L 7140816 7140872 chr2L 7140918 7140974 12 93 3.0 2.5 2.8 3.2 158 chr2L 7140816 intron Pvf3 - chr2L 7140895 intron Pvf3 - chr2L 7140974 intron Pvf3 - chr2L_12_7140001 chr2L_7140001 RAL-911 114 chr2L 7197984 7198016 chr2L 7198083 7198115 9 98 2.5 5.5 4.0 1.8 131 chr2L 7197984 intron CG4502 - chr2L 7198050 intron CG4502 - chr2L 7198115 intron CG4502 - chr2L_9_7195001 chr2L_7195001 RAL-911 115 chr2L 7218385 7218422 chr2L 7218483 7218519 6 97 1.0 3.5 2.2 1.9 134 chr2L 7218385 intron CG13784 - chr2L 7218452 intron CG13784 - chr2L 7218519 intron CG13784 - chr2L_6_7215001 chr2L_7215001 RAL-911 116 chr2L 7277675 7277720 chr2L 7277804 7277846 4 128 1.0 4.5 2.8 1.1 171 chr2L 7277675 intergenic not near genes chr2L 7277760 intergenic not near genes chr2L 7277846 intergenic not near genes chr2L_4_7275001 chr2L_7275001 RAL-911 117 chr2L 7336888 7336914 chr2L 7336981 7337017 4 100 3.5 2.0 2.8 1.1 129 chr2L 7336888 intron Wnt6 + chr2L 7336952 intron Wnt6 + chr2L 7337017 intron Wnt6 + chr2L_4_7335001 chr2L_7335001 RAL-911 118 chr2L 7343339 7343351 chr2L 7350439 7350486 roo 4 7124 2.0 1.5 1.8 1.4 7147 chr2L 7343339 intron Wnt6 + chr2L 7346912 intron Wnt6 + chr2L 7350486 intron Wnt6 + chr2L_4_7345001 chr2L_7345001 RAL-911 119 chr2L 7356166 7356207 chr2L 7356264 7356306 8 98 0.0 4.5 2.2 2.5 140 chr2L 7356166 intergenic not near genes chr2L 7356236 intergenic not near genes chr2L 7356306 intergenic not near genes chr2L_8_7355001 chr2L_7355001 RAL-911 120 chr2L 7363505 7363552 chr2L 7363603 7363650 11 96 2.0 0.5 1.2 5.0 145 chr2L 7363505 5` UTR Wnt10 + chr2L 7363578 5` UTR Wnt10 + chr2L 7363650 5` UTR Wnt10 + chr2L_11_7360001 chr2L_7360001 RAL-911 121 chr2L 7370786 7370815 chr2L 7370910 7370940 9 123 2.0 1.0 1.5 3.6 154 chr2L 7370786 intron Wnt10 + chr2L 7370863 intron Wnt10 + chr2L 7370940 intron Wnt10 + chr2L_9_7370001 chr2L_7370001 RAL-911 122 chr2L 7399293 7399325 chr2L 7399686 7399711 5 390 0.0 3.0 1.5 2.0 418 chr2L 7399293 intergenic not near genes chr2L 7399502 intergenic not near genes chr2L 7399711 intergenic not near genes chr2L_5_7395001 chr2L_7395001 RAL-911 123 chr2L 7432213 7432258 chr2L 7432315 7432360 18 102 1.5 4.0 2.8 4.7 147 chr2L 7432213 intron CG5958 - chr2L 7432286 intron CG5958 - chr2L 7432360 intron CG5958 - chr2L_18_7430001 chr2L_7430001 RAL-911 124 chr2L 7555709 7555753 chr2L 7555813 7555857 8 102 2.5 3.0 2.8 2.1 148 chr2L 7555709 intron RapGAP1 - chr2L 7555783 intron RapGAP1 - chr2L 7555857 intron RapGAP1 - chr2L_8_7555001 chr2L_7555001 RAL-911 125 chr2L 7621808 7621819 chr2L 7621920 7621931 4 112 3.0 2.0 2.5 1.1 123 chr2L 7621808 intergenic not near genes chr2L 7621870 intergenic not near genes chr2L 7621931 intergenic not near genes chr2L_4_7620001 chr2L_7620001 RAL-911 126 chr2L 7788833 7788857 chr2L 7788930 7788954 7 97 0.0 3.0 1.5 2.8 121 chr2L 7788833 intron CG7149 - chr2L 7788894 intron CG7149 - chr2L 7788954 intron CG7149 - chr2L_7_7785001 chr2L_7785001 RAL-911 127 chr2L 7829253 7829297 chr2L 7829371 7829415 8 117 1.5 5.5 3.5 1.8 162 chr2L 7829253 intron mts + chr2L 7829334 intron mts + chr2L 7829415 intron mts + chr2L_8_7825001 chr2L_7825001 RAL-911 128 chr2L 7959030 7959057 chr2L 7960459 7960487 pogo 4 1430 5.0 5.5 5.2 0.6 1457 chr2L 7959030 intron Snoo - chr2L 7959758 intron Snoo - chr2L 7960487 intron Snoo - chr2L_4_7955001 chr2L_7955001 RAL-911 129 chr2L 7977074 7977103 chr2L 7984052 7984080 297 5 6973 2.0 0.5 1.2 2.3 7006 chr2L 7977074 intron Snoo - chr2L 7980577 intron Snoo - chr2L 7984080 intron,5` UTR Snoo -,CG7231 + chr2L_5_7980001 chr2L_7980001 RAL-911 130 chr2L 7997013 7997064 chr2L 7997133 7997184 20 120 2.0 2.0 2.0 6.7 171 chr2L 7997013 intron CG7227 - chr2L 7997098 intron CG7227 - chr2L 7997184 intron CG7227 - chr2L_20_7995001 chr2L_7995001 RAL-911 131 chr2L 8018825 8018828 chr2L 8023629 8023632 Doc 4 4804 0.0 7.0 3.5 0.9 4807 chr2L 8018825 intron Tg + chr2L 8021228 intron Tg + chr2L 8023632 intron Tg + chr2L_4_8020001 chr2L_8020001 RAL-911 132 chr2L 8098391 8098444 chr2L 8098794 8098847 7 395 2.0 2.5 2.2 2.2 456 chr2L 8098391 intron Bsg + chr2L 8098619 intron Bsg + chr2L 8098847 intron Bsg + chr2L_7_8095001 chr2L_8095001 RAL-911 133 chr2L 8205594 8205618 chr2L 8205711 8205734 8 117 4.5 2.5 3.5 1.8 140 chr2L 8205594 3` UTR CR44120 - chr2L 8205664 intergenic CR44120 -,CR44121 -,CR44119 + chr2L 8205734 intergenic CR44121 -,CR44120 -,CR44119 +,CG8419 + chr2L_8_8205001 chr2L_8205001 RAL-911 134 chr2L 8231949 8232021 chr2L 8232077 8232119 5 121 0.0 3.0 1.5 2.0 170 chr2L 8231949 intron Pvr - chr2L 8232034 intron Pvr - chr2L 8232119 intron Pvr - chr2L_5_8230001 chr2L_8230001 RAL-911 135 chr2L 8412869 8412920 chr2L 8412973 8413026 9 101 4.0 2.0 3.0 2.2 157 chr2L 8412869 3` UTR CG13398 - chr2L 8412948 3` UTR CG13398 - chr2L 8413026 3` UTR CG13398 - chr2L_9_8410001 chr2L_8410001 RAL-911 136 chr2L 8452424 8452453 chr2L 8461602 8461644 roo 8 9189 3.5 8.5 6.0 1.1 9220 chr2L 8452424 intron fu12 - chr2L 8457034 intron fu12 - chr2L 8461644 intron fu12 - chr2L_8_8455001 chr2L_8455001 RAL-911 137 chr2L 8498185 8498235 chr2L 8498286 8498336 9 101 2.0 2.5 2.2 2.8 151 chr2L 8498185 intron Dh31 - chr2L 8498260 intron Dh31 - chr2L 8498336 intron Dh31 - chr2L_9_8495001 chr2L_8495001 RAL-911 138 chr2L 8594459 8594484 chr2L 8601524 8601541 297 7 7070 6.0 2.5 4.2 1.3 7082 chr2L 8594459 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598000 intron Sema-1a + chr2L 8601541 intron Sema-1a + chr2L_7_8595001 chr2L_8595001 RAL-911 139 chr2L 8612843 8612866 chr2L 8612940 8612961 5 97 3.5 5.5 4.5 0.9 118 chr2L 8612843 intron Sema-1a + chr2L 8612902 intron Sema-1a + chr2L 8612961 intron Sema-1a + chr2L_5_8610001 chr2L_8610001 RAL-911 140 chr2L 8629250 8629292 chr2L 8629348 8629390 10 98 5.0 2.0 3.5 2.2 140 chr2L 8629250 intron Sema-1a + chr2L 8629320 intron Sema-1a + chr2L 8629390 intron Sema-1a + chr2L_10_8625001 chr2L_8625001 RAL-911 141 chr2L 8698307 8698329 chr2L 8698466 8698488 11 159 4.5 0.0 2.2 3.4 181 chr2L 8698307 intron Hnf4 - chr2L 8698398 intron Hnf4 - chr2L 8698488 intron Hnf4 - chr2L_11_8695001 chr2L_8695001 RAL-911 142 chr2L 8698330 8698347 chr2L 8698464 8698506 6 155 2.5 0.0 1.2 2.7 176 chr2L 8698330 intron Hnf4 - chr2L 8698418 intron Hnf4 - chr2L 8698506 intron Hnf4 - chr2L_6_8695001 chr2L_8695001 RAL-911 143 chr2L 8723102 8723147 chr2L 8731499 8731544 Tirant 9 8392 1.5 3.0 2.2 2.8 8442 chr2L 8723102 intron raw - chr2L 8727323 intron raw - chr2L 8731544 intron raw - chr2L_9_8725001 chr2L_8725001 RAL-911 144 chr2L 8736249 8736256 chr2L 8736349 8736356 4 100 0.0 1.5 0.8 2.2 107 chr2L 8736249 intron raw - chr2L 8736302 intron raw - chr2L 8736356 intron raw - chr2L_4_8735001 chr2L_8735001 RAL-911 145 chr2L 8750740 8750773 chr2L 8750841 8750884 5 104 0.0 3.0 1.5 2.0 144 chr2L 8750740 intergenic not near genes chr2L 8750812 intergenic not near genes chr2L 8750884 intergenic not near genes chr2L_5_8750001 chr2L_8750001 RAL-911 146 chr2L 8799782 8799830 chr2L 8799918 8799966 15 131 3.0 2.0 2.5 4.3 184 chr2L 8799782 intergenic not near genes chr2L 8799874 intergenic not near genes chr2L 8799966 intergenic not near genes chr2L_15_8795001 chr2L_8795001 RAL-911 147 chr2L 8815460 8815468 chr2L 8815546 8815571 4 96 2.0 4.0 3.0 1.0 111 chr2L 8815460 intergenic not near genes chr2L 8815516 intergenic not near genes chr2L 8815571 intergenic not near genes chr2L_4_8815001 chr2L_8815001 RAL-911 148 chr2L 8875419 8875468 chr2L 8875517 8875566 8 97 1.5 0.0 0.8 4.4 147 chr2L 8875419 intergenic not near genes chr2L 8875492 intergenic not near genes chr2L 8875566 intergenic not near genes chr2L_8_8875001 chr2L_8875001 RAL-911 149 chr2L 8902449 8902477 chr2L 8902602 8902644 7 164 5.5 3.5 4.5 1.3 195 chr2L 8902449 intron CG34398 + chr2L 8902546 intron CG34398 + chr2L 8902644 intron CG34398 + chr2L_7_8900001 chr2L_8900001 RAL-911 150 chr2L 8980442 8980457 chr2L 8980551 8980566 7 109 7.5 1.5 4.5 1.3 124 chr2L 8980442 intron CG13101 - chr2L 8980504 intron CG13101 - chr2L 8980566 intron CG13101 - chr2L_7_8980001 chr2L_8980001 RAL-911 151 chr2L 9000266 9000311 chr2L 9007787 9007839 roo 8 7521 3.5 0.0 1.8 2.9 7573 chr2L 9000266 intergenic Try29F + chr2L 9004052 intergenic not near genes chr2L 9007839 intergenic not near genes chr2L_8_9000001 chr2L_9000001 RAL-911 152 chr2L 9158773 9158793 chr2L 9158890 9158910 6 116 4.0 0.5 2.2 1.9 137 chr2L 9158773 intron CG32982 + chr2L 9158842 intron CG32982 + chr2L 9158910 intron CG32982 + chr2L_6_9155001 chr2L_9155001 RAL-911 153 chr2L 9182719 9182756 chr2L 9182808 9182840 7 96 1.0 0.0 0.5 4.7 121 chr2L 9182719 intron tai + chr2L 9182780 intron tai + chr2L 9182840 intron tai + chr2L_7_9180001 chr2L_9180001 RAL-911 154 chr2L 9195851 9195877 chr2L 9195954 9195980 7 103 3.5 2.5 3.0 1.8 129 chr2L 9195851 intron tai + chr2L 9195916 intron tai + chr2L 9195980 intron tai + chr2L_7_9195001 chr2L_9195001 RAL-911 155 chr2L 9202050 9202083 chr2L 9202140 9202168 4 83 2.5 5.0 3.8 0.8 118 chr2L 9202050 intron tai + chr2L 9202109 intron tai + chr2L 9202168 intron tai + chr2L_4_9200001 chr2L_9200001 RAL-911 156 chr2L 9227213 9227249 chr2L 9227316 9227335 7 98 3.5 2.5 3.0 1.8 122 chr2L 9227213 intron tai + chr2L 9227274 intron tai + chr2L 9227335 intron tai + chr2L_7_9225001 chr2L_9225001 RAL-911 157 chr2L 9262111 9262136 chr2L 9262216 9262261 5 117 1.5 5.0 3.2 1.2 150 chr2L 9262111 intron,3` UTR Ggamma30A +,CR45262 - chr2L 9262186 intron,3` UTR Ggamma30A +,CR45262 - chr2L 9262261 intron,intron Ggamma30A +,CR45262 - chr2L_5_9260001 chr2L_9260001 RAL-911 158 chr2L 9285010 9285046 chr2L 9285105 9285141 4 89 0.5 0.5 0.5 2.7 131 chr2L 9285010 intron Ggamma30A + chr2L 9285076 intron Ggamma30A + chr2L 9285141 intron Ggamma30A + chr2L_4_9285001 chr2L_9285001 RAL-911 159 chr2L 9287342 9287356 chr2L 9287438 9287442 4 102 0.5 4.0 2.2 1.2 100 chr2L 9287342 intron Ggamma30A + chr2L 9287392 intron Ggamma30A + chr2L 9287442 intron Ggamma30A + chr2L_4_9285001 chr2L_9285001 RAL-911 160 chr2L 9297357 9297402 chr2L 9297454 9297499 9 96 5.0 1.0 3.0 2.2 142 chr2L 9297357 3` UTR Ggamma30A + chr2L 9297428 3` UTR Ggamma30A + chr2L 9297499 3` UTR Ggamma30A + chr2L_9_9295001 chr2L_9295001 RAL-911 161 chr2L 9334998 9335028 chr2L 9335097 9335127 5 98 8.5 4.5 6.5 0.7 129 chr2L 9334998 intron Eaat1 + chr2L 9335062 intron Eaat1 + chr2L 9335127 intron Eaat1 + chr2L_5_9335001 chr2L_9335001 RAL-911 162 chr2L 9385097 9385149 chr2L 9385207 9385259 7 106 3.0 3.5 3.2 1.7 162 chr2L 9385097 intron Shawl - chr2L 9385178 intron Shawl - chr2L 9385259 intron Shawl - chr2L_7_9385001 chr2L_9385001 RAL-911 163 chr2L 9387230 9387272 chr2L 9387348 9387390 8 116 8.0 3.0 5.5 1.2 160 chr2L 9387230 intron Shawl - chr2L 9387310 intron Shawl - chr2L 9387390 intron,5` UTR Shawl -,Aldh + chr2L_8_9385001 chr2L_9385001 RAL-911 164 chr2L 9391516 9391560 chr2L 9391702 9391747 4 187 4.0 5.0 4.5 0.7 231 chr2L 9391516 intron,3` UTR Shawl -,Aldh + chr2L 9391632 intron Shawl - chr2L 9391747 intron Shawl - chr2L_4_9390001 chr2L_9390001 RAL-911 165 chr2L 9393488 9393522 chr2L 9396474 9396481 jockey 8 2982 4.5 3.5 4.0 1.6 2993 chr2L 9393488 intron Shawl - chr2L 9394984 intron Shawl - chr2L 9396481 intron Shawl - chr2L_8_9390001 chr2L_9390001 RAL-911 166 chr2L 9454957 9455007 chr2L 9455079 9455131 11 121 3.5 0.0 1.8 3.9 174 chr2L 9454957 intron numb + chr2L 9455044 intron numb + chr2L 9455131 intron numb + chr2L_11_9455001 chr2L_9455001 RAL-911 167 chr2L 9487153 9487193 chr2L 9487273 9487300 10 114 2.0 0.0 1.0 5.0 147 chr2L 9487153 intergenic not near genes chr2L 9487226 intergenic not near genes chr2L 9487300 intergenic not near genes chr2L_10_9485001 chr2L_9485001 RAL-911 168 chr2L 9506409 9506445 chr2L 9506579 9506610 9 166 4.0 2.0 3.0 2.2 201 chr2L 9506409 intron CG33298 + chr2L 9506510 intron CG33298 + chr2L 9506610 intron CG33298 + chr2L_9_9505001 chr2L_9505001 RAL-911 169 chr2L 9620785 9620838 chr2L 9620887 9620936 7 102 0.5 0.0 0.2 5.8 151 chr2L 9620785 intron GlcAT-S + chr2L 9620860 intron GlcAT-S + chr2L 9620936 intron GlcAT-S + chr2L_7_9620001 chr2L_9620001 RAL-911 170 chr2L 9943331 9943369 chr2L 9943432 9943468 8 97 2.0 1.5 1.8 2.9 137 chr2L 9943331 intron CG5853 - chr2L 9943400 intron CG5853 - chr2L 9943468 intron CG5853 - chr2L_8_9940001 chr2L_9940001 RAL-911 171 chr2L 10122975 10123014 chr2L 10123084 10123115 6 108 3.5 2.5 3.0 1.5 140 chr2L 10122975 intron,intron CG44153 -,CG34109 + chr2L 10123045 intron,intron CG44153 -,CG34109 + chr2L 10123115 intron,intron CG44153 -,CG34109 + chr2L_6_10120001 chr2L_10120001 RAL-911 172 chr2L 10156350 10156354 chr2L 10163799 10163817 blood 4 7459 1.5 3.5 2.5 1.1 7467 chr2L 10156350 intron,3` UTR CG44153 -,CG4839 + chr2L 10160084 intron CG44153 - chr2L 10163817 intron CG44153 - chr2L_4_10160001 chr2L_10160001 RAL-911 173 chr2L 10294657 10294683 chr2L 10294763 10294789 4 106 5.0 2.5 3.8 0.8 132 chr2L 10294657 intron Hand - chr2L 10294723 intron Hand - chr2L 10294789 intron Hand - chr2L_4_10290001 chr2L_10290001 RAL-911 174 chr2L 10456618 10456626 chr2L 10456718 10456726 4 97 0.0 0.0 0.0 4.0 108 chr2L 10456618 intron CG5322 - chr2L 10456672 intron CG5322 - chr2L 10456726 intron CG5322 - chr2L_4_10455001 chr2L_10455001 RAL-911 175 chr2L 10458195 10458214 chr2L 10458311 10458330 7 115 0.0 2.5 1.2 3.2 135 chr2L 10458195 intron LM408 + chr2L 10458262 intron LM408 + chr2L 10458330 intron LM408 + chr2L_7_10455001 chr2L_10455001 RAL-911 176 chr2L 10515340 10515391 chr2L 10515453 10515496 19 110 6.5 5.5 6.0 2.7 156 chr2L 10515340 intron,intron CG45083 -,Fatp - chr2L 10515418 intron,intron CG45083 -,Fatp - chr2L 10515496 intron,intron CG45083 -,Fatp - chr2L_19_10515001 chr2L_10515001 RAL-911 177 chr2L 10531592 10531622 chr2L 10531704 10531734 4 112 0.0 3.0 1.5 1.6 142 chr2L 10531592 3` UTR Lip4 + chr2L 10531663 3` UTR Lip4 + chr2L 10531734 3` UTR Lip4 + chr2L_4_10530001 chr2L_10530001 RAL-911 178 chr2L 10555260 10555288 chr2L 10555356 10555384 6 92 4.5 0.0 2.2 1.9 124 chr2L 10555260 intron Trim9 + chr2L 10555322 intron Trim9 + chr2L 10555384 intron Trim9 + chr2L_6_10555001 chr2L_10555001 RAL-911 179 chr2L 10572697 10572735 chr2L 10572780 10572810 15 95 1.5 4.0 2.8 3.9 113 chr2L 10572697 intron Trim9 + chr2L 10572754 intron Trim9 + chr2L 10572810 intron Trim9 + chr2L_15_10570001 chr2L_10570001 RAL-911 180 chr2L 10580787 10580823 chr2L 10580875 10580923 8 99 1.0 3.5 2.2 2.5 136 chr2L 10580787 intron Trim9 + chr2L 10580855 intron Trim9 + chr2L 10580923 intron Trim9 + chr2L_8_10580001 chr2L_10580001 RAL-911 181 chr2L 10592826 10592860 chr2L 10600507 10600534 opus 4 7679 1.0 2.0 1.5 1.6 7708 chr2L 10592826 intron Trim9 + chr2L 10596680 intron Trim9 + chr2L 10600534 intron Trim9 + chr2L_4_10595001 chr2L_10595001 RAL-911 182 chr2L 10634734 10634786 chr2L 10634834 10634886 6 98 4.0 1.5 2.8 1.6 152 chr2L 10634734 intron CG7329 - chr2L 10634810 intron CG7329 - chr2L 10634886 intron CG7329 - chr2L_6_10630001 chr2L_10630001 RAL-911 183 chr2L 10641426 10641449 chr2L 10644190 10644229 5 2771 33.5 21.0 27.2 0.2 2803 chr2L 10641426 exon CG31872 + chr2L 10642828 exon CG31872 + chr2L 10644229 intron CG18284 + chr2L_5_10640001 chr2L_10640001 RAL-911 184 chr2L 10647580 10647592 chr2L 10647725 10647729 5 142 8.0 15.5 11.8 0.4 149 chr2L 10647580 exon CG17097 + chr2L 10647654 exon CG17097 + chr2L 10647729 exon CG17097 + chr2L_5_10645001 chr2L_10645001 RAL-911 185 chr2L 10656572 10656610 chr2L 10656668 10656706 18 95 3.5 1.0 2.2 5.6 134 chr2L 10656572 intergenic not near genes chr2L 10656639 intergenic not near genes chr2L 10656706 intergenic not near genes chr2L_18_10655001 chr2L_10655001 RAL-911 186 chr2L 10688522 10688560 chr2L 10688618 10688656 11 96 7.5 2.5 5.0 1.8 134 chr2L 10688522 intergenic CG7294 - chr2L 10688589 intergenic CG7294 - chr2L 10688656 intergenic CG7294 - chr2L_11_10685001 chr2L_10685001 RAL-911 187 chr2L 10705545 10705582 chr2L 10705654 10705664 5 104 4.0 0.5 2.2 1.6 119 chr2L 10705545 intron Lip2 - chr2L 10705604 intron Lip2 - chr2L 10705664 intron Lip2 - chr2L_5_10705001 chr2L_10705001 RAL-911 188 chr2L 10723531 10723546 chr2L 10723640 10723660 6 113 2.0 2.0 2.0 2.0 129 chr2L 10723531 intergenic not near genes chr2L 10723596 intergenic not near genes chr2L 10723660 intergenic not near genes chr2L_6_10720001 chr2L_10720001 RAL-911 189 chr2L 10793305 10793349 chr2L 10793401 10793446 14 95 1.5 2.0 1.8 5.0 141 chr2L 10793305 intron CG31869 - chr2L 10793376 intron CG31869 - chr2L 10793446 intron CG31869 - chr2L_14_10790001 chr2L_10790001 RAL-911 190 chr2L 10836228 10836356 chr2L 10836314 10836457 14 96 0.0 1.0 0.5 9.3 229 chr2L 10836228 intron Nos - chr2L 10836342 intron Nos - chr2L 10836457 intron Nos - chr2L_14_10835001 chr2L_10835001 RAL-911 191 chr2L 10836739 10836781 chr2L 10836838 10836879 5 97 5.5 1.0 3.2 1.2 140 chr2L 10836739 intron Nos - chr2L 10836809 intron Nos - chr2L 10836879 intron Nos - chr2L_5_10835001 chr2L_10835001 RAL-911 192 chr2L 10852151 10852182 chr2L 10852259 10852291 8 106 4.0 4.5 4.2 1.5 140 chr2L 10852151 intron CG43129 + chr2L 10852221 intron CG43129 + chr2L 10852291 intron CG43129 + chr2L_8_10850001 chr2L_10850001 RAL-911 193 chr2L 10912982 10912997 chr2L 10913062 10913096 5 95 4.0 1.0 2.5 1.4 114 chr2L 10912982 intergenic not near genes chr2L 10913039 intergenic not near genes chr2L 10913096 intergenic not near genes chr2L_5_10910001 chr2L_10910001 RAL-911 194 chr2L 10944454 10944466 chr2L 10944554 10944569 5 101 0.0 4.0 2.0 1.7 115 chr2L 10944454 intron dpr2 - chr2L 10944512 intron dpr2 - chr2L 10944569 intron dpr2 - chr2L_5_10940001 chr2L_10940001 RAL-911 195 chr2L 10956457 10956506 chr2L 10956559 10956563 6 94 1.5 0.0 0.8 3.3 106 chr2L 10956457 intron dpr2 - chr2L 10956510 intron dpr2 - chr2L 10956563 intron dpr2 - chr2L_6_10955001 chr2L_10955001 RAL-911 196 chr2L 11016665 11016685 chr2L 11016788 11016807 8 122 2.5 2.5 2.5 2.3 142 chr2L 11016665 intron Samuel - chr2L 11016736 intron Samuel - chr2L 11016807 intron Samuel - chr2L_8_11015001 chr2L_11015001 RAL-911 197 chr2L 11183766 11183812 chr2L 11183882 11183922 11 114 3.5 4.5 4.0 2.2 156 chr2L 11183766 intron Ca-beta - chr2L 11183844 intron Ca-beta - chr2L 11183922 intron Ca-beta - chr2L_11_11180001 chr2L_11180001 RAL-911 198 chr2L 11224036 11224084 chr2L 11224167 11224213 8 130 3.5 1.0 2.2 2.5 177 chr2L 11224036 intron ab + chr2L 11224124 intron ab + chr2L 11224213 intron ab + chr2L_8_11220001 chr2L_11220001 RAL-911 199 chr2L 11238631 11238676 chr2L 11238805 11238828 14 168 0.5 6.0 3.2 3.3 197 chr2L 11238631 intron ab + chr2L 11238730 intron ab + chr2L 11238828 intron ab + chr2L_14_11235001 chr2L_11235001 RAL-911 200 chr2L 11356413 11356415 chr2L 11356522 11356546 5 121 6.0 3.0 4.5 0.9 133 chr2L 11356413 intergenic not near genes chr2L 11356480 intergenic not near genes chr2L 11356546 intergenic not near genes chr2L_5_11355001 chr2L_11355001 RAL-911 201 chr2L 11357958 11358011 chr2L 11358056 11358109 16 95 2.0 3.0 2.5 4.6 151 chr2L 11357958 intergenic not near genes chr2L 11358034 intergenic not near genes chr2L 11358109 intergenic not near genes chr2L_16_11355001 chr2L_11355001 RAL-911 202 chr2L 11380620 11380635 chr2L 11380716 11380732 4 96 1.0 3.0 2.0 1.3 112 chr2L 11380620 intergenic not near genes chr2L 11380676 intergenic not near genes chr2L 11380732 intergenic not near genes chr2L_4_11380001 chr2L_11380001 RAL-911 203 chr2L 11395032 11395049 chr2L 11395134 11395151 5 101 1.5 0.5 1.0 2.5 119 chr2L 11395032 intergenic not near genes chr2L 11395092 intergenic not near genes chr2L 11395151 intergenic not near genes chr2L_5_11395001 chr2L_11395001 RAL-911 204 chr2L 11404777 11404805 chr2L 11404873 11404884 6 92 1.0 3.0 2.0 2.0 107 chr2L 11404777 intergenic not near genes chr2L 11404830 intergenic not near genes chr2L 11404884 intergenic not near genes chr2L_6_11400001 chr2L_11400001 RAL-911 205 chr2L 11418645 11418675 chr2L 11418735 11418772 4 88 1.0 0.5 0.8 2.2 127 chr2L 11418645 intergenic not near genes chr2L 11418708 intergenic not near genes chr2L 11418772 intergenic not near genes chr2L_4_11415001 chr2L_11415001 RAL-911 206 chr2L 11450105 11450113 chr2L 11450211 11450219 4 106 1.5 1.0 1.2 1.8 114 chr2L 11450105 intergenic not near genes chr2L 11450162 intergenic not near genes chr2L 11450219 intergenic not near genes chr2L_4_11450001 chr2L_11450001 RAL-911 207 chr2L 11450114 11450157 chr2L 11450210 11450224 4 93 0.0 1.0 0.5 2.7 110 chr2L 11450114 intergenic not near genes chr2L 11450169 intergenic not near genes chr2L 11450224 intergenic not near genes chr2L_4_11450001 chr2L_11450001 RAL-911 208 chr2L 11540312 11540352 chr2L 11540492 11540531 15 177 2.5 4.5 3.5 3.3 219 chr2L 11540312 intergenic not near genes chr2L 11540422 intergenic not near genes chr2L 11540531 intergenic not near genes chr2L_15_11540001 chr2L_11540001 RAL-911 209 chr2L 11540582 11540614 chr2L 11548004 11548033 Tabor 11 7421 4.5 6.5 5.5 1.7 7451 chr2L 11540582 intergenic not near genes chr2L 11544308 intergenic not near genes chr2L 11548033 intergenic not near genes chr2L_11_11540001 chr2L_11540001 RAL-911 210 chr2L 11550611 11550667 chr2L 11550719 11550776 11 109 3.5 5.5 4.5 2.0 165 chr2L 11550611 intergenic not near genes chr2L 11550694 intergenic not near genes chr2L 11550776 intergenic not near genes chr2L_11_11550001 chr2L_11550001 RAL-911 211 chr2L 11563639 11563662 chr2L 11568845 11568886 copia 6 5219 1.0 3.0 2.0 2.0 5247 chr2L 11563639 intergenic not near genes chr2L 11566262 intergenic not near genes chr2L 11568886 intergenic not near genes chr2L_6_11565001 chr2L_11565001 RAL-911 212 chr2L 11713501 11713537 chr2L 11720989 11721015 blood 9 7478 2.5 4.5 3.5 2.0 7514 chr2L 11713501 intergenic not near genes chr2L 11717258 intergenic not near genes chr2L 11721015 intergenic CR44143 + chr2L_9_11715001 chr2L_11715001 RAL-911 213 chr2L 11820430 11820465 chr2L 11820531 11820566 15 101 2.0 3.0 2.5 4.3 136 chr2L 11820430 intron Pde1c - chr2L 11820498 intron Pde1c - chr2L 11820566 intron Pde1c - chr2L_15_11820001 chr2L_11820001 RAL-911 214 chr2L 11825688 11825696 chr2L 11825787 11825795 4 99 4.5 0.0 2.2 1.2 107 chr2L 11825688 intron Pde1c - chr2L 11825742 intron Pde1c - chr2L 11825795 intron Pde1c - chr2L_4_11825001 chr2L_11825001 RAL-911 215 chr2L 11841350 11841391 chr2L 11841448 11841489 9 95 4.0 0.0 2.0 3.0 139 chr2L 11841350 intron Pde1c - chr2L 11841420 intron Pde1c - chr2L 11841489 intron Pde1c - chr2L_9_11840001 chr2L_11840001 RAL-911 216 chr2L 11886434 11886444 chr2L 11886553 11886563 5 119 6.0 2.0 4.0 1.0 129 chr2L 11886434 intron Pde1c - chr2L 11886498 intron Pde1c - chr2L 11886563 intron Pde1c - chr2L_5_11885001 chr2L_11885001 RAL-911 217 chr2L 12058172 12058207 chr2L 12058275 12058309 6 102 2.5 5.0 3.8 1.2 137 chr2L 12058172 exon,3` UTR CG34164 +,RpL7-like + chr2L 12058240 3` UTR,3` UTR CG34164 +,RpL7-like + chr2L 12058309 3` UTR Rab3-GAP - chr2L_6_12055001 chr2L_12055001 RAL-911 218 chr2L 12067319 12067354 chr2L 12074391 12074426 297 18 7071 3.0 3.5 3.2 4.3 7107 chr2L 12067319 intergenic not near genes chr2L 12070872 intergenic not near genes chr2L 12074426 intergenic not near genes chr2L_18_12070001 chr2L_12070001 RAL-911 219 chr2L 12112025 12112044 chr2L 12112156 12112175 4 131 0.0 11.0 5.5 0.6 150 chr2L 12112025 3` UTR Phae2 + chr2L 12112100 3` UTR Phae2 + chr2L 12112175 3` UTR Phae2 + chr2L_4_12110001 chr2L_12110001 RAL-911 220 chr2L 12131462 12131492 chr2L 12131574 12131608 10 114 5.5 5.5 5.5 1.5 146 chr2L 12131462 intron rho-6 - chr2L 12131535 intron rho-6 - chr2L 12131608 intron rho-6 - chr2L_10_12130001 chr2L_12130001 RAL-911 221 chr2L 12132702 12132746 chr2L 12132808 12132852 20 105 0.0 5.0 2.5 5.7 150 chr2L 12132702 intron rho-6 - chr2L 12132777 intron rho-6 - chr2L 12132852 intron rho-6 - chr2L_20_12130001 chr2L_12130001 RAL-911 222 chr2L 12176198 12176240 chr2L 12176299 12176341 9 97 1.5 7.5 4.5 1.6 143 chr2L 12176198 intron,intron aret +,atilla - chr2L 12176270 intron,intron aret +,atilla - chr2L 12176341 intron,intron aret +,atilla - chr2L_9_12175001 chr2L_12175001 RAL-911 223 chr2L 12196764 12196806 chr2L 12197297 12197339 6 528 3.5 2.5 3.0 1.5 575 chr2L 12196764 intron aret + chr2L 12197052 intron aret + chr2L 12197339 intron aret + chr2L_6_12195001 chr2L_12195001 RAL-911 224 chr2L 12255840 12255881 chr2L 12255956 12255997 17 116 2.0 4.0 3.0 4.2 157 chr2L 12255840 intron aret + chr2L 12255918 intron aret + chr2L 12255997 intron aret + chr2L_17_12255001 chr2L_12255001 RAL-911 225 chr2L 12294235 12294275 chr2L 12294332 12294371 8 100 0.5 1.0 0.8 4.4 136 chr2L 12294235 intron aret + chr2L 12294303 intron aret + chr2L 12294371 intron aret + chr2L_8_12290001 chr2L_12290001 RAL-911 226 chr2L 12366845 12366890 chr2L 12366951 12366996 18 105 2.5 2.5 2.5 5.1 151 chr2L 12366845 intron bru-2 + chr2L 12366920 intron bru-2 + chr2L 12366996 intron bru-2 + chr2L_18_12365001 chr2L_12365001 RAL-911 227 chr2L 12487872 12487900 chr2L 12487973 12488001 8 96 3.0 3.0 3.0 2.0 129 chr2L 12487872 intron bun - chr2L 12487936 intron bun - chr2L 12488001 intron bun - chr2L_8_12485001 chr2L_12485001 RAL-911 228 chr2L 12547449 12547490 chr2L 12547553 12547588 5 102 0.0 0.0 0.0 5.0 139 chr2L 12547449 intergenic not near genes chr2L 12547518 intergenic not near genes chr2L 12547588 intergenic not near genes chr2L_5_12545001 chr2L_12545001 RAL-911 229 chr2L 12583483 12583501 chr2L 12583594 12583602 6 109 4.0 0.0 2.0 2.0 119 chr2L 12583483 5` UTR CR44595 + chr2L 12583542 5` UTR CR44595 + chr2L 12583602 intergenic CR44595 + chr2L_6_12580001 chr2L_12580001 RAL-911 230 chr2L 12598187 12598198 chr2L 12598284 12598295 7 96 4.0 3.0 3.5 1.6 108 chr2L 12598187 intron nub + chr2L 12598241 intron nub + chr2L 12598295 intron nub + chr2L_7_12595001 chr2L_12595001 RAL-911 231 chr2L 12728899 12728948 chr2L 12729162 12729211 pogo 7 263 5.0 2.0 3.5 1.6 312 chr2L 12728899 intron MRP + chr2L 12729055 intron MRP + chr2L 12729211 exon MRP + chr2L_7_12725001 chr2L_12725001 RAL-911 232 chr2L 12731044 12731089 chr2L 12735831 12735866 F-element 7 4785 3.0 2.0 2.5 2.0 4822 chr2L 12731044 intron MRP + chr2L 12733455 intron MRP + chr2L 12735866 intron MRP + chr2L_7_12730001 chr2L_12730001 RAL-911 233 chr2L 12739165 12739198 chr2L 12743961 12743999 Doc 9 4797 3.0 2.5 2.8 2.4 4834 chr2L 12739165 exon MRP + chr2L 12741582 intron MRP + chr2L 12743999 exon MRP + chr2L_9_12740001 chr2L_12740001 RAL-911 234 chr2L 12763812 12763865 chr2L 12764037 12764085 BS 5 225 0.0 0.0 0.0 5.0 273 chr2L 12763812 intergenic not near genes chr2L 12763948 intergenic not near genes chr2L 12764085 intergenic not near genes chr2L_5_12760001 chr2L_12760001 RAL-911 235 chr2L 12781782 12781797 chr2L 12789245 12789260 Quasimodo 5 7462 5.5 5.0 5.2 0.8 7478 chr2L 12781782 intergenic not near genes chr2L 12785521 intergenic not near genes chr2L 12789260 intergenic not near genes chr2L_5_12785001 chr2L_12785001 RAL-911 236 chr2L 12791592 12791624 chr2L 12795287 12795302 F-element 7 3691 2.0 5.0 3.5 1.6 3710 chr2L 12791592 intergenic not near genes chr2L 12793447 intergenic not near genes chr2L 12795302 intergenic not near genes chr2L_7_12790001 chr2L_12790001 RAL-911 237 chr2L 12791625 12791630 chr2L 12795284 12795325 F-element 4 3686 2.0 4.5 3.2 1.0 3700 chr2L 12791625 intergenic not near genes chr2L 12793475 intergenic not near genes chr2L 12795325 intergenic not near genes chr2L_4_12790001 chr2L_12790001 RAL-911 238 chr2L 12807418 12807459 chr2L 12807520 12807561 12 99 3.5 2.0 2.8 3.2 143 chr2L 12807418 intergenic CR43818 - chr2L 12807490 intergenic CR43818 - chr2L 12807561 intergenic CR43818 - chr2L_12_12805001 chr2L_12805001 RAL-911 239 chr2L 12861677 12861721 chr2L 12863164 12863208 hobo 7 1482 2.0 1.0 1.5 2.8 1531 chr2L 12861677 intergenic not near genes chr2L 12862442 intergenic not near genes chr2L 12863208 intergenic not near genes chr2L_7_12860001 chr2L_12860001 RAL-911 240 chr2L 12970490 12970533 chr2L 12970581 12970624 8 92 2.5 2.0 2.2 2.5 134 chr2L 12970490 intergenic not near genes chr2L 12970557 intergenic not near genes chr2L 12970624 intergenic not near genes chr2L_8_12970001 chr2L_12970001 RAL-911 241 chr2L 13266359 13266407 chr2L 13266467 13266500 15 97 3.5 2.0 2.8 3.9 141 chr2L 13266359 intron CG44085 + chr2L 13266430 intron CG44085 + chr2L 13266500 intron CG44085 + chr2L_15_13265001 chr2L_13265001 RAL-911 242 chr2L 13405640 13405653 chr2L 13410456 13410469 Doc 4 4816 1.0 3.0 2.0 1.3 4829 chr2L 13405640 exon CG7110 + chr2L 13408054 intron CG7110 + chr2L 13410469 intron CG7110 + chr2L_4_13405001 chr2L_13405001 RAL-911 243 chr2L 13405657 13405675 chr2L 13410455 13410469 Doc 4 4803 0.5 3.0 1.8 1.4 4812 chr2L 13405657 exon CG7110 + chr2L 13408063 intron CG7110 + chr2L 13410469 intron CG7110 + chr2L_4_13405001 chr2L_13405001 RAL-911 244 chr2L 13449473 13449485 chr2L 13456922 13456941 Quasimodo 6 7451 0.5 6.0 3.2 1.4 7468 chr2L 13449473 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453207 intron CG42784 + chr2L 13456941 intron CG42784 + chr2L_6_13450001 chr2L_13450001 RAL-911 245 chr2L 13481432 13481459 chr2L 13482056 13482086 jockey 5 625 6.0 6.5 6.2 0.7 654 chr2L 13481432 intron CG42784 + chr2L 13481759 intron CG42784 + chr2L 13482086 intron CG42784 + chr2L_5_13480001 chr2L_13480001 RAL-911 246 chr2L 13558802 13558845 chr2L 13558912 13558955 16 108 3.5 4.0 3.8 3.3 153 chr2L 13558802 exon kuz + chr2L 13558878 intron kuz + chr2L 13558955 intron kuz + chr2L_16_13555001 chr2L_13555001 RAL-911 247 chr2L 13560384 13560421 chr2L 13565225 13565232 F-element 12 4836 5.0 2.0 3.5 2.7 4848 chr2L 13560384 intron kuz + chr2L 13562808 intron kuz + chr2L 13565232 intron kuz + chr2L_12_13560001 chr2L_13560001 RAL-911 248 chr2L 13713542 13713573 chr2L 13713638 13713669 7 96 3.0 1.0 2.0 2.3 127 chr2L 13713542 intron CG31814 - chr2L 13713606 intron CG31814 - chr2L 13713669 intron CG31814 - chr2L_7_13710001 chr2L_13710001 RAL-911 249 chr2L 13800156 13800205 chr2L 13800279 13800329 15 123 2.5 4.0 3.2 3.6 173 chr2L 13800156 intergenic Sec71 + chr2L 13800242 intergenic not near genes chr2L 13800329 intergenic not near genes chr2L_15_13800001 chr2L_13800001 RAL-911 250 chr2L 13842115 13842161 chr2L 13842219 13842265 15 104 4.5 3.0 3.8 3.1 150 chr2L 13842115 intron CenG1A + chr2L 13842190 intron CenG1A + chr2L 13842265 intron CenG1A + chr2L_15_13840001 chr2L_13840001 RAL-911 251 chr2L 13851706 13851748 chr2L 13851831 13851873 11 123 4.0 2.0 3.0 2.8 167 chr2L 13851706 intron CenG1A + chr2L 13851790 intron CenG1A + chr2L 13851873 intron CenG1A + chr2L_11_13850001 chr2L_13850001 RAL-911 252 chr2L 13853082 13853117 chr2L 13862232 13862256 roo 10 9160 2.0 5.5 3.8 2.1 9174 chr2L 13853082 intron CenG1A + chr2L 13857669 intron CenG1A + chr2L 13862256 intron CenG1A + chr2L_10_13855001 chr2L_13855001 RAL-911 253 chr2L 13889576 13889595 chr2L 13889659 13889659 5 73 1.5 4.0 2.8 1.3 83 chr2L 13889576 intron CenG1A + chr2L 13889618 intron CenG1A + chr2L 13889659 intron CenG1A + chr2L_5_13885001 chr2L_13885001 RAL-911 254 chr2L 13987194 13987227 chr2L 13987295 13987328 8 101 3.0 2.5 2.8 2.1 134 chr2L 13987194 intron rk - chr2L 13987261 intron rk - chr2L 13987328 intron rk - chr2L_8_13985001 chr2L_13985001 RAL-911 255 chr2L 14079148 14079180 chr2L 14079703 14079737 7 555 2.5 4.0 3.2 1.7 589 chr2L 14079148 intron nAChRalpha5 + chr2L 14079442 intron nAChRalpha5 + chr2L 14079737 intron nAChRalpha5 + chr2L_7_14075001 chr2L_14075001 RAL-911 256 chr2L 14096139 14096184 chr2L 14096250 14096261 4 92 2.0 0.0 1.0 2.0 122 chr2L 14096139 intergenic not near genes chr2L 14096200 intergenic not near genes chr2L 14096261 intergenic not near genes chr2L_4_14095001 chr2L_14095001 RAL-911 257 chr2L 14109496 14109545 chr2L 14109607 14109652 12 110 2.5 3.0 2.8 3.2 156 chr2L 14109496 intergenic CG15293 -,CG31769 - chr2L 14109574 intergenic CG31769 -,CG15293 - chr2L 14109652 3` UTR CG31769 - chr2L_12_14105001 chr2L_14105001 RAL-911 258 chr2L 14222281 14222320 chr2L 14222388 14222417 5 105 10.5 4.5 7.5 0.6 136 chr2L 14222281 intron Dyrk2 - chr2L 14222349 intron Dyrk2 - chr2L 14222417 intron Dyrk2 - chr2L_5_14220001 chr2L_14220001 RAL-911 259 chr2L 14236228 14236268 chr2L 14236334 14236383 6 112 2.0 0.0 1.0 3.0 155 chr2L 14236228 5` UTR CR44728 + chr2L 14236306 5` UTR CR44728 + chr2L 14236383 intergenic CR44728 + chr2L_6_14235001 chr2L_14235001 RAL-911 260 chr2L 14340503 14340555 chr2L 14340605 14340651 5 100 0.0 1.5 0.8 2.8 148 chr2L 14340503 intron CG33090 + chr2L 14340577 intron CG33090 + chr2L 14340651 intron CG33090 + chr2L_5_14340001 chr2L_14340001 RAL-911 261 chr2L 14429420 14429445 chr2L 14429521 14429546 10 101 2.0 3.0 2.5 2.9 126 chr2L 14429420 3` UTR CR44732 - chr2L 14429483 3` UTR CR44732 - chr2L 14429546 3` UTR CR44732 - chr2L_10_14425001 chr2L_14425001 RAL-911 262 chr2L 14570704 14570721 chr2L 14570805 14570822 6 100 0.0 3.0 1.5 2.4 118 chr2L 14570704 intergenic not near genes chr2L 14570763 intergenic not near genes chr2L 14570822 intergenic not near genes chr2L_6_14570001 chr2L_14570001 RAL-911 263 chr2L 14588369 14588417 chr2L 14588536 14588546 9 162 2.0 1.5 1.8 3.2 177 chr2L 14588369 intergenic CG42680 - chr2L 14588458 intergenic CG42680 - chr2L 14588546 intergenic CG42680 - chr2L_9_14585001 chr2L_14585001 RAL-911 264 chr2L 14694247 14694288 chr2L 14694388 14694432 9 144 3.5 1.5 2.5 2.6 185 chr2L 14694247 intergenic not near genes chr2L 14694340 intergenic not near genes chr2L 14694432 intergenic not near genes chr2L_9_14690001 chr2L_14690001 RAL-911 265 chr2L 14768914 14768950 chr2L 14769012 14769048 10 98 0.0 5.0 2.5 2.9 134 chr2L 14768914 intergenic not near genes chr2L 14768981 intergenic not near genes chr2L 14769048 intergenic not near genes chr2L_10_14765001 chr2L_14765001 RAL-911 266 chr2L 14787116 14787122 chr2L 14787212 14787216 5 95 3.5 0.0 1.8 1.8 100 chr2L 14787116 intergenic not near genes chr2L 14787166 intergenic not near genes chr2L 14787216 intergenic not near genes chr2L_5_14785001 chr2L_14785001 RAL-911 267 chr2L 14840956 14841006 chr2L 14841064 14841113 13 105 3.0 1.0 2.0 4.3 157 chr2L 14840956 3` UTR CR43805 - chr2L 14841034 3` UTR CR43805 - chr2L 14841113 3` UTR CR43805 - chr2L_13_14840001 chr2L_14840001 RAL-911 268 chr2L 14887674 14887693 chr2L 14887772 14887791 6 98 2.0 1.0 1.5 2.4 117 chr2L 14887674 intergenic not near genes chr2L 14887732 intergenic not near genes chr2L 14887791 intergenic not near genes chr2L_6_14885001 chr2L_14885001 RAL-911 269 chr2L 14889935 14889983 chr2L 14890380 14890428 jockey 7 441 3.0 1.0 2.0 2.3 493 chr2L 14889935 intergenic not near genes chr2L 14890182 intergenic not near genes chr2L 14890428 intergenic not near genes chr2L_7_14890001 chr2L_14890001 RAL-911 270 chr2L 14919359 14919409 chr2L 14919454 14919465 7 90 2.5 0.0 1.2 3.2 106 chr2L 14919359 intron CG42313 - chr2L 14919412 intron CG42313 - chr2L 14919465 intron CG42313 - chr2L_7_14915001 chr2L_14915001 RAL-911 271 chr2L 14930268 14930305 chr2L 14930371 14930400 7 102 1.5 3.5 2.5 2.0 132 chr2L 14930268 intron,3` UTR CG42313 -,CG3491 + chr2L 14930334 intron,3` UTR CG42313 -,CG3491 + chr2L 14930400 intron,3` UTR CG42313 -,CG3491 + chr2L_7_14930001 chr2L_14930001 RAL-911 272 chr2L 14984386 14984405 chr2L 14991995 14992012 opus 8 7613 3.0 3.5 3.2 1.9 7626 chr2L 14984386 intron mol - chr2L 14988199 intron mol - chr2L 14992012 intron mol - chr2L_8_14985001 chr2L_14985001 RAL-911 273 chr2L 15000861 15000873 chr2L 15000967 15001008 6 115 7.5 16.0 11.8 0.5 147 chr2L 15000861 intergenic not near genes chr2L 15000934 intergenic not near genes chr2L 15001008 intergenic not near genes chr2L_6_15000001 chr2L_15000001 RAL-911 274 chr2L 15044701 15044741 chr2L 15044797 15044817 13 94 3.0 0.0 1.5 5.2 116 chr2L 15044701 intergenic ck - chr2L 15044759 intergenic ck - chr2L 15044817 intergenic ck - chr2L_13_15040001 chr2L_15040001 RAL-911 275 chr2L 15078049 15078102 chr2L 15078157 15078188 10 98 3.0 4.0 3.5 2.2 139 chr2L 15078049 intron CG15270 + chr2L 15078118 intron CG15270 + chr2L 15078188 intron CG15270 + chr2L_10_15075001 chr2L_15075001 RAL-911 276 chr2L 15080885 15080936 chr2L 15080997 15081052 6 114 3.0 1.0 2.0 2.0 167 chr2L 15080885 intron CG15270 + chr2L 15080968 intron CG15270 + chr2L 15081052 intron CG15270 + chr2L_6_15080001 chr2L_15080001 RAL-911 277 chr2L 15082647 15082662 chr2L 15082761 15082775 5 113 6.5 6.5 6.5 0.7 128 chr2L 15082647 intron CG15270 + chr2L 15082711 intron CG15270 + chr2L 15082775 intron CG15270 + chr2L_5_15080001 chr2L_15080001 RAL-911 278 chr2L 15082666 15082688 chr2L 15082756 15082802 8 111 4.0 5.5 4.8 1.4 136 chr2L 15082666 intron CG15270 + chr2L 15082734 intron CG15270 + chr2L 15082802 intron CG15270 + chr2L_8_15080001 chr2L_15080001 RAL-911 279 chr2L 15084256 15084301 chr2L 15084523 15084565 7 263 3.0 1.0 2.0 2.3 309 chr2L 15084256 intron CG15270 + chr2L 15084410 intron CG15270 + chr2L 15084565 intron CG15270 + chr2L_7_15080001 chr2L_15080001 RAL-911 280 chr2L 15122793 15122807 chr2L 15122892 15122905 7 99 0.0 11.5 5.8 1.0 112 chr2L 15122793 intergenic not near genes chr2L 15122849 intergenic not near genes chr2L 15122905 intergenic not near genes chr2L_7_15120001 chr2L_15120001 RAL-911 281 chr2L 15252971 15253007 chr2L 15253070 15253106 11 98 5.0 3.5 4.2 2.1 135 chr2L 15252971 intron dao + chr2L 15253038 intron dao + chr2L 15253106 intron dao + chr2L_11_15250001 chr2L_15250001 RAL-911 282 chr2L 15309331 15309370 chr2L 15309454 15309493 4 123 3.5 0.0 1.8 1.4 162 chr2L 15309331 intergenic not near genes chr2L 15309412 intergenic not near genes chr2L 15309493 intergenic not near genes chr2L_4_15305001 chr2L_15305001 RAL-911 283 chr2L 15343518 15343546 chr2L 15343623 15343651 6 105 4.0 0.0 2.0 2.0 133 chr2L 15343518 intergenic not near genes chr2L 15343584 intergenic not near genes chr2L 15343651 intergenic not near genes chr2L_6_15340001 chr2L_15340001 RAL-911 284 chr2L 15446046 15446084 chr2L 15453535 15453573 blood 10 7489 2.5 5.0 3.8 2.1 7527 chr2L 15446046 intergenic not near genes chr2L 15449810 intergenic not near genes chr2L 15453573 intergenic not near genes chr2L_10_15445001 chr2L_15445001 RAL-911 285 chr2L 15458260 15458278 chr2L 15458368 15458386 5 105 3.5 3.5 3.5 1.1 126 chr2L 15458260 intergenic not near genes chr2L 15458323 intergenic not near genes chr2L 15458386 intergenic not near genes chr2L_5_15455001 chr2L_15455001 RAL-911 286 chr2L 15476391 15476422 chr2L 15476570 15476601 12 179 2.5 4.0 3.2 2.9 210 chr2L 15476391 intergenic sna - chr2L 15476496 intergenic sna - chr2L 15476601 3` UTR sna - chr2L_12_15475001 chr2L_15475001 RAL-911 287 chr2L 15490030 15490044 chr2L 15490166 15490180 4 136 0.0 6.5 3.2 1.0 150 chr2L 15490030 intergenic not near genes chr2L 15490105 intergenic not near genes chr2L 15490180 intergenic not near genes chr2L_4_15490001 chr2L_15490001 RAL-911 288 chr2L 15498451 15498491 chr2L 15498576 15498619 5 126 3.5 1.5 2.5 1.4 168 chr2L 15498451 intergenic not near genes chr2L 15498535 intergenic not near genes chr2L 15498619 intergenic not near genes chr2L_5_15495001 chr2L_15495001 RAL-911 289 chr2L 15499896 15499938 chr2L 15500004 15500021 5 103 0.0 5.0 2.5 1.4 125 chr2L 15499896 intron lace + chr2L 15499958 intron lace + chr2L 15500021 intron lace + chr2L_5_15495001 chr2L_15495001 RAL-911 290 chr2L 15508837 15508860 chr2L 15508914 15508957 4 89 1.5 1.0 1.2 1.8 120 chr2L 15508837 intergenic not near genes chr2L 15508897 intergenic not near genes chr2L 15508957 intergenic not near genes chr2L_4_15505001 chr2L_15505001 RAL-911 291 chr2L 15510931 15510966 chr2L 15511038 15511080 10 108 0.5 6.0 3.2 2.4 149 chr2L 15510931 intergenic not near genes chr2L 15511006 intergenic not near genes chr2L 15511080 intergenic not near genes chr2L_10_15510001 chr2L_15510001 RAL-911 292 chr2L 15535866 15535914 chr2L 15535973 15536024 18 106 1.0 2.0 1.5 7.2 158 chr2L 15535866 intergenic not near genes chr2L 15535945 intergenic not near genes chr2L 15536024 intergenic not near genes chr2L_18_15535001 chr2L_15535001 RAL-911 293 chr2L 15586393 15586440 chr2L 15593464 15593512 297 13 7072 4.5 2.0 3.2 3.1 7119 chr2L 15586393 intergenic not near genes chr2L 15589952 intergenic not near genes chr2L 15593512 intergenic not near genes chr2L_13_15585001 chr2L_15585001 RAL-911 294 chr2L 15598774 15598798 chr2L 15598871 15598897 8 99 1.5 0.0 0.8 4.4 123 chr2L 15598774 intergenic not near genes chr2L 15598836 intergenic not near genes chr2L 15598897 intergenic not near genes chr2L_8_15595001 chr2L_15595001 RAL-911 295 chr2L 15790166 15790215 chr2L 15790262 15790311 16 96 3.5 3.5 3.5 3.6 145 chr2L 15790166 intergenic CG18109 + chr2L 15790238 intergenic CG18109 + chr2L 15790311 intergenic CG18109 + chr2L_16_15790001 chr2L_15790001 RAL-911 296 chr2L 15823331 15823359 chr2L 15823427 15823455 7 96 1.5 0.5 1.0 3.5 124 chr2L 15823331 intergenic CR44601 - chr2L 15823393 intergenic CR44601 - chr2L 15823455 intergenic not near genes chr2L_7_15820001 chr2L_15820001 RAL-911 297 chr2L 15935176 15935220 chr2L 15935285 15935330 5 109 3.5 4.0 3.8 1.0 154 chr2L 15935176 intron beat-Ib - chr2L 15935253 intron beat-Ib - chr2L 15935330 intron beat-Ib - chr2L_5_15935001 chr2L_15935001 RAL-911 298 chr2L 15956021 15956040 chr2L 15957508 15957527 hobo 6 1486 3.5 2.5 3.0 1.5 1506 chr2L 15956021 intron beat-Ib - chr2L 15956774 intron beat-Ib - chr2L 15957527 intron beat-Ib - chr2L_6_15955001 chr2L_15955001 RAL-911 299 chr2L 15991057 15991101 chr2L 15991164 15991208 12 105 1.0 2.0 1.5 4.8 151 chr2L 15991057 intergenic not near genes chr2L 15991132 intergenic not near genes chr2L 15991208 intergenic not near genes chr2L_12_15990001 chr2L_15990001 RAL-911 300 chr2L 16115502 16115546 chr2L 16115598 16115642 11 93 2.0 4.0 3.0 2.8 140 chr2L 16115502 intergenic not near genes chr2L 16115572 intergenic not near genes chr2L 16115642 intergenic not near genes chr2L_11_16115001 chr2L_16115001 RAL-911 301 chr2L 16141165 16141195 chr2L 16146376 16146422 copia 5 5223 2.0 3.5 2.8 1.3 5257 chr2L 16141165 intergenic not near genes chr2L 16143794 intergenic not near genes chr2L 16146422 intergenic not near genes chr2L_5_16140001 chr2L_16140001 RAL-911 302 chr2L 16243679 16243692 chr2L 16243782 16243795 4 103 2.0 2.5 2.2 1.2 116 chr2L 16243679 exon CG42818 + chr2L 16243737 exon CG42818 + chr2L 16243795 exon CG42818 + chr2L_4_16240001 chr2L_16240001 RAL-911 303 chr2L 16363921 16363961 chr2L 16364187 16364227 10 265 5.0 2.0 3.5 2.2 306 chr2L 16363921 intergenic not near genes chr2L 16364074 intergenic not near genes chr2L 16364227 intergenic not near genes chr2L_10_16360001 chr2L_16360001 RAL-911 304 chr2L 16384488 16384520 chr2L 16384589 16384629 5 102 2.0 6.0 4.0 1.0 141 chr2L 16384488 intergenic not near genes chr2L 16384558 intergenic not near genes chr2L 16384629 intergenic not near genes chr2L_5_16380001 chr2L_16380001 RAL-911 305 chr2L 16511945 16511984 chr2L 16519079 16519118 HMS-Beagle 6 7134 5.0 1.5 3.2 1.4 7173 chr2L 16511945 intron CG5953 - chr2L 16515532 intron CG5953 - chr2L 16519118 intron CG5953 - chr2L_6_16515001 chr2L_16515001 RAL-911 306 chr2L 16550636 16550685 chr2L 16550732 16550781 14 96 1.5 3.5 2.5 4.0 145 chr2L 16550636 intron CG42389 + chr2L 16550708 intron CG42389 + chr2L 16550781 intron CG42389 + chr2L_14_16550001 chr2L_16550001 RAL-911 307 chr2L 16583077 16583089 chr2L 16583185 16583197 5 108 0.5 4.0 2.2 1.6 120 chr2L 16583077 intron CG42389 + chr2L 16583137 intron CG42389 + chr2L 16583197 intron CG42389 + chr2L_5_16580001 chr2L_16580001 RAL-911 308 chr2L 16583091 16583112 chr2L 16583183 16583209 9 101 0.5 4.0 2.2 2.8 118 chr2L 16583091 intron CG42389 + chr2L 16583150 intron CG42389 + chr2L 16583209 intron CG42389 + chr2L_9_16580001 chr2L_16580001 RAL-911 309 chr2L 16583541 16583580 chr2L 16583695 16583726 9 150 5.5 5.0 5.2 1.5 185 chr2L 16583541 intron CG42389 + chr2L 16583634 intron CG42389 + chr2L 16583726 intron CG42389 + chr2L_9_16580001 chr2L_16580001 RAL-911 310 chr2L 16594009 16594147 chr2L 16594106 16594257 11 105 0.0 0.0 0.0 11.0 248 chr2L 16594009 intron CG42389 + chr2L 16594133 intron CG42389 + chr2L 16594257 intron CG42389 + chr2L_11_16590001 chr2L_16590001 RAL-911 311 chr2L 16670400 16670444 chr2L 16670497 16670541 8 96 1.5 5.5 3.5 1.8 141 chr2L 16670400 intron Trpgamma - chr2L 16670470 intron Trpgamma - chr2L 16670541 intron Trpgamma - chr2L_8_16670001 chr2L_16670001 RAL-911 312 chr2L 16693901 16693929 chr2L 16694000 16694007 6 97 3.5 1.5 2.5 1.7 106 chr2L 16693901 intron grp + chr2L 16693954 intron grp + chr2L 16694007 intron grp + chr2L_6_16690001 chr2L_16690001 RAL-911 313 chr2L 16695241 16695291 chr2L 16695345 16695395 10 103 3.5 4.5 4.0 2.0 154 chr2L 16695241 intron grp + chr2L 16695318 intron grp + chr2L 16695395 intron grp + chr2L_10_16695001 chr2L_16695001 RAL-911 314 chr2L 16697051 16697081 chr2L 16697264 16697294 6 213 0.0 3.0 1.5 2.4 243 chr2L 16697051 intron grp + chr2L 16697172 intron grp + chr2L 16697294 intron grp + chr2L_6_16695001 chr2L_16695001 RAL-911 315 chr2L 16799476 16799505 chr2L 16799638 16799667 10 162 0.0 1.5 0.8 5.6 191 chr2L 16799476 intron Ugt36Bc + chr2L 16799572 intron Ugt36Bc + chr2L 16799667 intron Ugt36Bc + chr2L_10_16795001 chr2L_16795001 RAL-911 316 chr2L 16958087 16958137 chr2L 16962895 16962920 Doc 5 4803 2.5 4.5 3.5 1.1 4833 chr2L 16958087 intergenic not near genes chr2L 16960504 intergenic not near genes chr2L 16962920 intergenic not near genes chr2L_5_16960001 chr2L_16960001 RAL-911 317 chr2L 17052393 17052433 chr2L 17052525 17052565 10 132 2.5 1.0 1.8 3.6 172 chr2L 17052393 intergenic not near genes chr2L 17052479 intergenic not near genes chr2L 17052565 intergenic not near genes chr2L_10_17050001 chr2L_17050001 RAL-911 318 chr2L 17062736 17062789 chr2L 17062838 17062891 6 99 2.0 1.5 1.8 2.1 155 chr2L 17062736 intergenic not near genes chr2L 17062814 intergenic not near genes chr2L 17062891 intergenic not near genes chr2L_6_17060001 chr2L_17060001 RAL-911 319 chr2L 17167565 17167596 chr2L 17167812 17167857 pogo 6 258 1.5 2.0 1.8 2.1 292 chr2L 17167565 intron,intron CG34106 +,beat-IIIa + chr2L 17167711 intron,intron CG34106 +,beat-IIIa + chr2L 17167857 intron,intron CG34106 +,beat-IIIa + chr2L_6_17165001 chr2L_17165001 RAL-911 320 chr2L 17168052 17168085 chr2L 17168667 17168702 4 619 15.0 13.5 14.2 0.3 650 chr2L 17168052 intron,intron CG34106 +,beat-IIIa + chr2L 17168377 intron,intron CG34106 +,beat-IIIa + chr2L 17168702 intron,intron CG34106 +,beat-IIIa + chr2L_4_17165001 chr2L_17165001 RAL-911 321 chr2L 17199141 17199188 chr2L 17200628 17200670 hobo 5 1484 3.0 3.0 3.0 1.2 1529 chr2L 17199141 intron beat-IIIc - chr2L 17199906 intron beat-IIIc - chr2L 17200670 intron beat-IIIc - chr2L_5_17195001 chr2L_17195001 RAL-911 322 chr2L 17208046 17208061 chr2L 17208162 17208166 4 113 2.5 2.5 2.5 1.1 120 chr2L 17208046 intron beat-IIIc - chr2L 17208106 intron beat-IIIc - chr2L 17208166 intron beat-IIIc - chr2L_4_17205001 chr2L_17205001 RAL-911 323 chr2L 17220804 17220847 chr2L 17220912 17220956 4 109 1.0 1.0 1.0 2.0 152 chr2L 17220804 intron beat-IIIc - chr2L 17220880 intron beat-IIIc - chr2L 17220956 intron beat-IIIc - chr2L_4_17220001 chr2L_17220001 RAL-911 324 chr2L 17264744 17264771 chr2L 17264844 17264871 11 100 0.5 4.5 2.5 3.1 127 chr2L 17264744 intergenic not near genes chr2L 17264808 intergenic not near genes chr2L 17264871 intergenic not near genes chr2L_11_17260001 chr2L_17260001 RAL-911 325 chr2L 17306266 17306299 chr2L 17306351 17306397 9 96 1.0 3.5 2.2 2.8 131 chr2L 17306266 intergenic not near genes chr2L 17306332 intergenic not near genes chr2L 17306397 intergenic not near genes chr2L_9_17305001 chr2L_17305001 RAL-911 326 chr2L 17351935 17351956 chr2L 17352052 17352078 9 121 0.5 3.0 1.8 3.2 143 chr2L 17351935 intergenic not near genes chr2L 17352006 intergenic not near genes chr2L 17352078 intergenic not near genes chr2L_9_17350001 chr2L_17350001 RAL-911 327 chr2L 17372334 17372369 chr2L 17372434 17372469 7 100 0.5 4.5 2.5 2.0 135 chr2L 17372334 intron Lrch - chr2L 17372402 intron Lrch - chr2L 17372469 intron Lrch - chr2L_7_17370001 chr2L_17370001 RAL-911 328 chr2L 17424241 17424291 chr2L 17424419 17424464 14 176 1.0 2.0 1.5 5.6 223 chr2L 17424241 intron Dif - chr2L 17424352 intron Dif - chr2L 17424464 intron Dif - chr2L_14_17420001 chr2L_17420001 RAL-911 329 chr2L 17474661 17474704 chr2L 17474767 17474810 12 106 2.5 1.5 2.0 4.0 149 chr2L 17474661 3` UTR Sgt + chr2L 17474736 3` UTR Sgt + chr2L 17474810 intergenic Sgt +,Aac11 - chr2L_12_17470001 chr2L_17470001 RAL-911 330 chr2L 17490824 17491092 chr2L 17491058 17491161 7 187 0.5 0.0 0.2 5.8 337 chr2L 17490824 intron qua - chr2L 17490992 intron qua - chr2L 17491161 intron qua - chr2L_7_17490001 chr2L_17490001 RAL-911 331 chr2L 17517835 17517880 chr2L 17517938 17517983 9 99 3.0 0.5 1.8 3.2 148 chr2L 17517835 intron Dhc36C + chr2L 17517909 intron Dhc36C + chr2L 17517983 intron Dhc36C + chr2L_9_17515001 chr2L_17515001 RAL-911 332 chr2L 17675923 17675972 chr2L 17676022 17676071 14 99 2.5 1.0 1.8 5.0 148 chr2L 17675923 intron CadN - chr2L 17675997 intron CadN - chr2L 17676071 intron CadN - chr2L_14_17675001 chr2L_17675001 RAL-911 333 chr2L 17703654 17703672 chr2L 17703758 17703765 4 103 1.5 4.0 2.8 1.1 111 chr2L 17703654 intron CadN - chr2L 17703710 intron CadN - chr2L 17703765 intron CadN - chr2L_4_17700001 chr2L_17700001 RAL-911 334 chr2L 17723774 17723792 chr2L 17723887 17723904 7 112 3.0 1.0 2.0 2.3 130 chr2L 17723774 intron CadN - chr2L 17723839 intron CadN - chr2L 17723904 intron CadN - chr2L_7_17720001 chr2L_17720001 RAL-911 335 chr2L 17796024 17796044 chr2L 17796118 17796145 7 97 0.5 2.0 1.2 3.2 121 chr2L 17796024 intron CadN2 - chr2L 17796084 intron CadN2 - chr2L 17796145 intron CadN2 - chr2L_7_17795001 chr2L_17795001 RAL-911 336 chr2L 17819903 17819950 chr2L 17825126 17825145 copia 4 5215 3.0 1.0 2.0 1.3 5242 chr2L 17819903 intron CadN2 - chr2L 17822524 intron CadN2 - chr2L 17825145 intron CadN2 - chr2L_4_17820001 chr2L_17820001 RAL-911 337 chr2L 17891464 17891485 chr2L 17891539 17891573 4 90 1.5 2.5 2.0 1.3 109 chr2L 17891464 intergenic not near genes chr2L 17891518 intergenic not near genes chr2L 17891573 intergenic not near genes chr2L_4_17890001 chr2L_17890001 RAL-911 338 chr2L 17944418 17944450 chr2L 17944580 17944627 7 171 1.5 2.5 2.0 2.3 209 chr2L 17944418 intergenic not near genes chr2L 17944522 intergenic not near genes chr2L 17944627 intergenic not near genes chr2L_7_17940001 chr2L_17940001 RAL-911 339 chr2L 17951933 17951978 chr2L 17953420 17953465 hobo 11 1487 0.5 2.5 1.5 4.4 1532 chr2L 17951933 intergenic CR44398 -,CR44397 - chr2L 17952699 intergenic not near genes chr2L 17953465 intergenic not near genes chr2L_11_17950001 chr2L_17950001 RAL-911 340 chr2L 18051854 18051904 chr2L 18061021 18061050 roo 7 9155 4.0 2.5 3.2 1.7 9196 chr2L 18051854 intron rdo + chr2L 18056452 intron rdo + chr2L 18061050 intron rdo + chr2L_7_18055001 chr2L_18055001 RAL-911 341 chr2L 18111252 18111263 chr2L 18111335 18111347 5 88 3.0 4.5 3.8 1.0 95 chr2L 18111252 intergenic not near genes chr2L 18111300 intergenic not near genes chr2L 18111347 intergenic not near genes chr2L_5_18110001 chr2L_18110001 RAL-911 342 chr2L 18199019 18199066 chr2L 18199120 18199167 12 98 1.5 2.0 1.8 4.3 148 chr2L 18199019 intron CG42750 - chr2L 18199093 intron CG42750 - chr2L 18199167 intron CG42750 - chr2L_12_18195001 chr2L_18195001 RAL-911 343 chr2L 18254794 18254837 chr2L 18254913 18254957 10 118 3.5 2.0 2.8 2.6 163 chr2L 18254794 intron CG42750 - chr2L 18254876 intron CG42750 - chr2L 18254957 intron CG42750 - chr2L_10_18250001 chr2L_18250001 RAL-911 344 chr2L 18264125 18264159 chr2L 18264233 18264267 6 105 3.5 0.0 1.8 2.1 142 chr2L 18264125 intron CG42750 - chr2L 18264196 intron CG42750 - chr2L 18264267 intron CG42750 - chr2L_6_18260001 chr2L_18260001 RAL-911 345 chr2L 16217660 16217660 chr2L 18331928 18331928 F-element 4 2114268 17.0 11.0 14.0 0.3 2114268 chr2L 16217660 intergenic not near genes chr2L 17274794 intergenic not near genes chr2L 18331928 intron Fas3 + chr2L_4_17270001 chr2L_17270001 RAL-911 346 chr2L 18408027 18408053 chr2L 18412811 18412820 Doc 5 4793 2.0 4.5 3.2 1.2 4793 chr2L 18408027 intergenic not near genes chr2L 18410424 intergenic not near genes chr2L 18412820 intergenic not near genes chr2L_5_18410001 chr2L_18410001 RAL-911 347 chr2L 18417542 18417556 chr2L 18417660 18417674 4 118 5.5 1.5 3.5 0.9 132 chr2L 18417542 intergenic not near genes chr2L 18417608 intergenic not near genes chr2L 18417674 intergenic not near genes chr2L_4_18415001 chr2L_18415001 RAL-911 348 chr2L 18419777 18419800 chr2L 18419881 18419882 6 101 2.5 1.0 1.8 2.1 105 chr2L 18419777 intergenic not near genes chr2L 18419830 intergenic not near genes chr2L 18419882 intergenic not near genes chr2L_6_18415001 chr2L_18415001 RAL-911 349 chr2L 18440037 18440335 chr2L 18440313 18440461 14 203 0.5 0.5 0.5 9.3 424 chr2L 18440037 intergenic not near genes chr2L 18440249 intergenic not near genes chr2L 18440461 intergenic not near genes chr2L_14_18440001 chr2L_18440001 RAL-911 350 chr2L 18811388 18811431 chr2L 18811490 18811533 7 102 4.0 0.0 2.0 2.3 145 chr2L 18811388 intergenic CG10570 -,CG42502 - chr2L 18811460 intergenic CG10570 -,CG42502 - chr2L 18811533 intergenic not near genes chr2L_7_18810001 chr2L_18810001 RAL-911 351 chr2L 18811669 18811689 chr2L 18811886 18811887 7 213 4.5 3.0 3.8 1.5 218 chr2L 18811669 intergenic not near genes chr2L 18811778 intergenic not near genes chr2L 18811887 intergenic not near genes chr2L_7_18810001 chr2L_18810001 RAL-911 352 chr2L 18812552 18812584 chr2L 18812835 18812852 4 276 1.5 6.5 4.0 0.8 300 chr2L 18812552 intergenic CG17325 +,CG42305 + chr2L 18812702 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812852 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_4_18810001 chr2L_18810001 RAL-911 353 chr2L 18817429 18817467 chr2L 18818270 18818319 7 848 15.5 23.0 19.2 0.3 890 chr2L 18817429 intergenic not near genes chr2L 18817874 intergenic not near genes chr2L 18818319 intergenic not near genes chr2L_7_18815001 chr2L_18815001 RAL-911 354 chr2L 18898383 18898425 chr2L 18898485 18898523 12 96 3.0 0.0 1.5 4.8 140 chr2L 18898383 intergenic not near genes chr2L 18898453 intergenic not near genes chr2L 18898523 intergenic not near genes chr2L_12_18895001 chr2L_18895001 RAL-911 355 chr2L 18996009 18996030 chr2L 18996093 18996135 6 95 2.0 4.5 3.2 1.4 126 chr2L 18996009 intergenic CG10650 - chr2L 18996072 intergenic CG10650 - chr2L 18996135 intergenic CG10650 - chr2L_6_18995001 chr2L_18995001 RAL-911 356 chr2L 19147373 19147397 chr2L 19154412 19154452 297 9 7043 3.0 2.0 2.5 2.6 7079 chr2L 19147373 intron brat + chr2L 19150912 intron brat + chr2L 19154452 intron brat + chr2L_9_19150001 chr2L_19150001 RAL-911 357 chr2L 19246821 19246835 chr2L 19246919 19246933 4 98 6.0 1.5 3.8 0.8 112 chr2L 19246821 intergenic not near genes chr2L 19246877 intergenic not near genes chr2L 19246933 intergenic not near genes chr2L_4_19245001 chr2L_19245001 RAL-911 358 chr2L 19247376 19247389 chr2L 19247474 19247481 8 97 4.0 3.5 3.8 1.7 105 chr2L 19247376 intergenic not near genes chr2L 19247428 intergenic not near genes chr2L 19247481 intergenic not near genes chr2L_8_19245001 chr2L_19245001 RAL-911 359 chr2L 19251667 19251717 chr2L 19251787 19251829 10 114 5.5 1.5 3.5 2.2 162 chr2L 19251667 intergenic not near genes chr2L 19251748 intergenic not near genes chr2L 19251829 intergenic not near genes chr2L_10_19250001 chr2L_19250001 RAL-911 360 chr2L 19345012 19345031 chr2L 19357221 19357260 blood 7 12223 0.0 1.0 0.5 4.7 12248 chr2L 19345012 intron dnt - chr2L 19351136 intron dnt - chr2L 19357260 intron dnt - chr2L_7_19350001 chr2L_19350001 RAL-911 361 chr2L 19357529 19357566 chr2L 19357639 19357659 10 106 3.0 4.5 3.8 2.1 130 chr2L 19357529 intron dnt - chr2L 19357594 intron dnt - chr2L 19357659 intron dnt - chr2L_10_19355001 chr2L_19355001 RAL-911 362 chr2L 19364058 19364108 chr2L 19364158 19364208 11 98 3.5 3.0 3.2 2.6 150 chr2L 19364058 intergenic CG13086 + chr2L 19364133 intergenic CG13086 + chr2L 19364208 intergenic CG13086 + chr2L_11_19360001 chr2L_19360001 RAL-911 363 chr2L 19378324 19378358 chr2L 19378427 19378461 10 100 4.5 4.5 4.5 1.8 137 chr2L 19378324 intergenic not near genes chr2L 19378392 intergenic not near genes chr2L 19378461 intergenic not near genes chr2L_10_19375001 chr2L_19375001 RAL-911 364 chr2L 19380495 19380516 chr2L 19380595 19380613 7 99 2.5 6.0 4.2 1.3 118 chr2L 19380495 intergenic CG17350 + chr2L 19380554 intergenic CG17350 + chr2L 19380613 intergenic CG17350 + chr2L_7_19380001 chr2L_19380001 RAL-911 365 chr2L 19405597 19405635 chr2L 19405707 19405738 10 109 2.5 2.0 2.2 3.1 141 chr2L 19405597 intron Pax - chr2L 19405668 intron Pax - chr2L 19405738 intron Pax - chr2L_10_19405001 chr2L_19405001 RAL-911 366 chr2L 19407705 19407736 chr2L 19407915 19407953 6 212 2.5 2.0 2.2 1.9 248 chr2L 19407705 intron Pax - chr2L 19407829 intron Pax - chr2L 19407953 intron Pax - chr2L_6_19405001 chr2L_19405001 RAL-911 367 chr2L 19437506 19437523 chr2L 19437618 19437635 4 112 1.5 1.0 1.2 1.8 129 chr2L 19437506 intron CG10237 - chr2L 19437570 intron CG10237 - chr2L 19437635 intron CG10237 - chr2L_4_19435001 chr2L_19435001 RAL-911 368 chr2L 19441046 19441088 chr2L 19441143 19441162 10 92 3.0 2.5 2.8 2.6 116 chr2L 19441046 intron CG10237 - chr2L 19441104 intron CG10237 - chr2L 19441162 5` UTR CG10237 - chr2L_10_19440001 chr2L_19440001 RAL-911 369 chr2L 19559988 19560037 chr2L 19560261 19560309 11 270 0.5 4.0 2.2 3.4 321 chr2L 19559988 exon Tep5 + chr2L 19560148 exon Tep5 + chr2L 19560309 intron Tep5 + chr2L_11_19560001 chr2L_19560001 RAL-911 370 chr2L 19560826 19560848 chr2L 19560915 19560948 5 97 5.0 0.0 2.5 1.4 122 chr2L 19560826 exon Tep5 + chr2L 19560887 exon Tep5 + chr2L 19560948 exon Tep5 + chr2L_5_19560001 chr2L_19560001 RAL-911 371 chr2L 19561320 19561349 chr2L 19561483 19561510 6 162 3.0 2.5 2.8 1.6 190 chr2L 19561320 exon Tep5 + chr2L 19561415 exon Tep5 + chr2L 19561510 exon Tep5 + chr2L_6_19560001 chr2L_19560001 RAL-911 372 chr2L 19562512 19562558 chr2L 19562612 19562623 7 93 2.0 0.5 1.2 3.2 111 chr2L 19562512 exon Tep5 + chr2L 19562568 intron Tep5 + chr2L 19562623 intron Tep5 + chr2L_7_19560001 chr2L_19560001 RAL-911 373 chr2L 19620080 19620131 chr2L 19621089 19621125 jockey 4 1004 2.5 1.5 2.0 1.3 1045 chr2L 19620080 intron Lar + chr2L 19620602 intron Lar + chr2L 19621125 intron Lar + chr2L_4_19620001 chr2L_19620001 RAL-911 374 chr2L 19652567 19652599 chr2L 19674011 19674055 opus 9 21454 1.0 5.5 3.2 2.1 21488 chr2L 19652567 intron Lar + chr2L 19663311 intron Lar + chr2L 19674055 intron Lar + chr2L_9_19660001 chr2L_19660001 RAL-911 375 chr2L 19703528 19703564 chr2L 19712679 19712703 roo 7 9152 6.5 6.0 6.2 1.0 9175 chr2L 19703528 intron Lar + chr2L 19708116 intron Lar + chr2L 19712703 intron Lar + chr2L_7_19705001 chr2L_19705001 RAL-911 376 chr2L 19762799 19762836 chr2L 19763058 19763097 pogo 10 257 2.5 4.5 3.5 2.2 298 chr2L 19762799 5` UTR fbp - chr2L 19762948 intron fbp - chr2L 19763097 intron fbp - chr2L_10_19760001 chr2L_19760001 RAL-911 377 chr2L 19776642 19776657 chr2L 19776742 19776757 4 100 8.0 3.5 5.8 0.6 115 chr2L 19776642 3` UTR CdGAPr - chr2L 19776700 3` UTR CdGAPr - chr2L 19776757 3` UTR CdGAPr - chr2L_4_19775001 chr2L_19775001 RAL-911 378 chr2L 19911713 19911732 chr2L 19911817 19911826 4 104 0.5 1.5 1.0 2.0 113 chr2L 19911713 intron,3` UTR sick +,CR43097 - chr2L 19911770 intron,3` UTR sick +,CR43097 - chr2L 19911826 intron,3` UTR sick +,TotF - chr2L_4_19910001 chr2L_19910001 RAL-911 379 chr2L 20005857 20005899 chr2L 20010953 20010995 flea 11 5095 7.0 5.0 6.0 1.6 5138 chr2L 20005857 intron CG43861 - chr2L 20008426 intron CG43861 - chr2L 20010995 intron CG43861 - chr2L_11_20005001 chr2L_20005001 RAL-911 380 chr2L 20036511 20036560 chr2L 20036615 20036664 12 101 1.5 5.5 3.5 2.7 153 chr2L 20036511 intron sNPF + chr2L 20036588 intron sNPF + chr2L 20036664 intron sNPF + chr2L_12_20035001 chr2L_20035001 RAL-911 381 chr2L 20122618 20122649 chr2L 20122728 20122760 10 111 5.0 1.0 3.0 2.5 142 chr2L 20122618 intergenic not near genes chr2L 20122689 intergenic not near genes chr2L 20122760 intergenic not near genes chr2L_10_20120001 chr2L_20120001 RAL-911 382 chr2L 20272103 20272144 chr2L 20282825 20282859 copia 9 10722 5.5 2.0 3.8 1.9 10756 chr2L 20272103 intergenic not near genes chr2L 20277481 intergenic not near genes chr2L 20282859 intergenic not near genes chr2L_9_20275001 chr2L_20275001 RAL-911 383 chr2L 20296487 20296538 chr2L 20296588 20296639 12 98 0.0 0.5 0.2 10.0 152 chr2L 20296487 intergenic CR43414 - chr2L 20296563 intergenic CR43414 - chr2L 20296639 intergenic CR43414 - chr2L_12_20295001 chr2L_20295001 RAL-911 384 chr2L 20310889 20310916 chr2L 20310963 20311015 5 87 0.5 6.0 3.2 1.2 126 chr2L 20310889 intergenic spir + chr2L 20310952 intergenic spir + chr2L 20311015 intergenic spir + chr2L_5_20310001 chr2L_20310001 RAL-911 385 chr2L 20320025 20320066 chr2L 20320148 20320205 4 132 3.0 0.0 1.5 1.6 180 chr2L 20320025 intron spir + chr2L 20320115 intron spir + chr2L 20320205 intron spir + chr2L_4_20320001 chr2L_20320001 RAL-911 386 chr2L 20367560 20367581 chr2L 20367696 20367715 6 140 2.5 11.0 6.8 0.8 155 chr2L 20367560 intergenic not near genes chr2L 20367638 intergenic not near genes chr2L 20367715 intergenic not near genes chr2L_6_20365001 chr2L_20365001 RAL-911 387 chr2L 20372204 20372221 chr2L 20372474 20372491 pogo 6 268 2.0 3.5 2.8 1.6 287 chr2L 20372204 intergenic Ugt37a1 - chr2L 20372348 intergenic Ugt37a1 - chr2L 20372491 exon Ugt37a1 - chr2L_6_20370001 chr2L_20370001 RAL-911 388 chr2L 20372840 20372878 chr2L 20372936 20372973 11 87 3.0 2.0 2.5 3.1 133 chr2L 20372840 exon Ugt37a1 - chr2L 20372906 exon Ugt37a1 - chr2L 20372973 exon Ugt37a1 - chr2L_11_20370001 chr2L_20370001 RAL-911 389 chr2L 20498691 20498701 chr2L 20498789 20498819 5 114 1.0 2.5 1.8 1.8 128 chr2L 20498691 intergenic not near genes chr2L 20498755 intergenic not near genes chr2L 20498819 intergenic not near genes chr2L_5_20495001 chr2L_20495001 RAL-911 390 chr2L 20500395 20500444 chr2L 20500495 20500544 13 100 1.5 2.5 2.0 4.3 149 chr2L 20500395 intergenic not near genes chr2L 20500470 intergenic not near genes chr2L 20500544 intergenic not near genes chr2L_13_20500001 chr2L_20500001 RAL-911 391 chr2L 20568650 20568686 chr2L 20569060 20569096 X-element 9 410 1.5 2.0 1.8 3.2 446 chr2L 20568650 intron CR45347 + chr2L 20568873 intron CR45347 + chr2L 20569096 intron CR45347 + chr2L_9_20565001 chr2L_20565001 RAL-911 392 chr2L 20576213 20576249 chr2L 20583696 20583735 blood 11 7485 2.0 2.0 2.0 3.7 7522 chr2L 20576213 intergenic CR45347 + chr2L 20579974 intergenic not near genes chr2L 20583735 3` UTR CR44909 - chr2L_11_20575001 chr2L_20575001 RAL-911 393 chr2L 20601769 20601816 chr2L 20601867 20601914 14 98 1.0 1.0 1.0 7.0 145 chr2L 20601769 intron CR44909 - chr2L 20601842 intron CR44909 - chr2L 20601914 intron CR44909 - chr2L_14_20600001 chr2L_20600001 RAL-911 394 chr2L 20602710 20602746 chr2L 20602818 20602854 12 108 1.5 1.5 1.5 4.8 144 chr2L 20602710 intron CR44909 - chr2L 20602782 intron CR44909 - chr2L 20602854 intron CR44909 - chr2L_12_20600001 chr2L_20600001 RAL-911 395 chr2L 20821482 20821521 chr2L 20821650 20821688 10 163 3.0 0.0 1.5 4.0 206 chr2L 20821482 intergenic not near genes chr2L 20821585 intergenic not near genes chr2L 20821688 intergenic not near genes chr2L_10_20820001 chr2L_20820001 RAL-911 396 chr2L 20835792 20835839 chr2L 20836529 20836576 Quasimodo 13 737 3.5 2.0 2.8 3.4 784 chr2L 20835792 5` UTR Oseg5 - chr2L 20836184 intergenic Oseg5 -,Spn38F - chr2L 20836576 intergenic Spn38F - chr2L_13_20835001 chr2L_20835001 RAL-911 397 chr2L 20862582 20862594 chr2L 20862677 20862711 4 112 0.0 7.5 3.8 0.8 129 chr2L 20862582 intergenic not near genes chr2L 20862646 intergenic not near genes chr2L 20862711 intergenic not near genes chr2L_4_20860001 chr2L_20860001 RAL-911 398 chr2L 20891519 20891545 chr2L 20896635 20896666 jockey 6 5118 3.0 3.0 3.0 1.5 5147 chr2L 20891519 intron,intron CG43739 -,sky - chr2L 20894092 intron,intron CG43739 -,sky - chr2L 20896666 intron,intron CG43739 -,sky - chr2L_6_20890001 chr2L_20890001 RAL-911 399 chr2L 20901478 20901487 chr2L 20902624 20902650 1360 5 1160 0.5 0.0 0.2 4.2 1172 chr2L 20901478 intron,intron CG43739 -,sky - chr2L 20902064 intron,intron CG43739 -,sky - chr2L 20902650 intron,intron CG43739 -,sky - chr2L_5_20900001 chr2L_20900001 RAL-911 400 chr2L 20934581 20934636 chr2L 20934796 20934851 12 215 6.5 2.5 4.5 2.2 270 chr2L 20934581 intergenic CG9270 - chr2L 20934716 intergenic not near genes chr2L 20934851 intergenic not near genes chr2L_12_20930001 chr2L_20930001 RAL-911 401 chr2L 20967062 20967102 chr2L 20967168 20967208 9 102 0.5 2.0 1.2 4.1 146 chr2L 20967062 3` UTR CG42238 - chr2L 20967135 3` UTR CG42238 - chr2L 20967208 3` UTR CG42238 - chr2L_9_20965001 chr2L_20965001 RAL-911 402 chr2L 20976620 20976675 chr2L 20981455 20981510 X-element 10 4832 6.0 5.0 5.5 1.5 4890 chr2L 20976620 intron CG42238 - chr2L 20979065 intron CG42238 - chr2L 20981510 intron CG42238 - chr2L_10_20975001 chr2L_20975001 RAL-911 403 chr2L 20982247 20982297 chr2L 20982360 20982410 13 110 2.0 1.5 1.8 4.6 163 chr2L 20982247 intron CG42238 - chr2L 20982328 intron CG42238 - chr2L 20982410 intron CG42238 - chr2L_13_20980001 chr2L_20980001 RAL-911 404 chr2L 21003546 21003582 chr2L 21003640 21003687 10 102 1.5 4.0 2.8 2.6 141 chr2L 21003546 intron CG42238 - chr2L 21003616 intron CG42238 - chr2L 21003687 intron CG42238 - chr2L_10_21000001 chr2L_21000001 RAL-911 405 chr2L 21020259 21020294 chr2L 21023956 21023966 NOF 7 3688 3.0 1.5 2.2 2.2 3707 chr2L 21020259 intron CG42238 - chr2L 21022112 intron CG42238 - chr2L 21023966 intron CG42238 - chr2L_7_21020001 chr2L_21020001 RAL-911 406 chr2L 21041119 21041161 chr2L 21049400 21049415 Tirant 4 8270 2.0 3.5 2.8 1.1 8296 chr2L 21041119 intron CG42238 - chr2L 21045267 intron CG42238 - chr2L 21049415 intron CG42238 - chr2L_4_21045001 chr2L_21045001 RAL-911 407 chr2L 21074907 21074933 chr2L 21075017 21075039 5 110 8.5 5.5 7.0 0.6 132 chr2L 21074907 intergenic tadr + chr2L 21074973 intergenic tadr + chr2L 21075039 intergenic tadr + chr2L_5_21070001 chr2L_21070001 RAL-911 408 chr2L 21113673 21113717 chr2L 21113782 21113818 9 107 2.5 6.5 4.5 1.6 145 chr2L 21113673 intron Nhe2 + chr2L 21113746 intron Nhe2 + chr2L 21113818 intron Nhe2 + chr2L_9_21110001 chr2L_21110001 RAL-911 409 chr2L 21169822 21169874 chr2L 21169924 21169976 15 102 2.0 5.0 3.5 3.3 154 chr2L 21169822 intron Acon + chr2L 21169899 intron Acon + chr2L 21169976 intron Acon + chr2L_15_21165001 chr2L_21165001 RAL-911 410 chr2L 21286586 21286608 chr2L 21286684 21286706 8 98 4.5 1.5 3.0 2.0 120 chr2L 21286586 exon Mio - chr2L 21286646 intron Mio - chr2L 21286706 intron Mio - chr2L_8_21285001 chr2L_21285001 RAL-911 411 chr2L 21286611 21286620 chr2L 21286683 21286718 4 92 4.0 1.5 2.8 1.1 107 chr2L 21286611 exon Mio - chr2L 21286664 intron Mio - chr2L 21286718 intron Mio - chr2L_4_21285001 chr2L_21285001 RAL-911 412 chr2L 21315780 21315829 chr2L 21315876 21315927 15 91 4.0 2.0 3.0 3.8 147 chr2L 21315780 intron crc + chr2L 21315854 intron crc + chr2L 21315927 intron crc + chr2L_15_21315001 chr2L_21315001 RAL-911 413 chr2L 21347550 21347576 chr2L 21355042 21355068 blood 6 7492 5.5 6.0 5.8 0.9 7518 chr2L 21347550 intron Tsp39D + chr2L 21351309 intron Tsp39D + chr2L 21355068 intron Tsp39D + chr2L_6_21350001 chr2L_21350001 RAL-911 414 chr2L 21355590 21355618 chr2L 21355755 21355775 4 159 7.0 2.0 4.5 0.7 185 chr2L 21355590 exon Tsp39D + chr2L 21355682 intron Tsp39D + chr2L 21355775 intron Tsp39D + chr2L_4_21355001 chr2L_21355001 RAL-911 415 chr2L 21597031 21597058 chr2L 21604773 21604821 roo 5 7754 4.5 3.5 4.0 1.0 7790 chr2L 21597031 intergenic not near genes chr2L 21600926 intergenic not near genes chr2L 21604821 intergenic not near genes chr2L_5_21600001 chr2L_21600001 RAL-911 416 chr2L 21750088 21750135 chr2L 21750428 21750478 8 341 4.5 7.0 5.8 1.2 390 chr2L 21750088 intron step - chr2L 21750283 intron step - chr2L 21750478 intron step - chr2L_8_21750001 chr2L_21750001 RAL-911 417 chr2L 21769943 21769970 chr2L 21770043 21770071 9 100 4.0 2.0 3.0 2.2 128 chr2L 21769943 intron CG31612 - chr2L 21770007 intron CG31612 - chr2L 21770071 intron CG31612 - chr2L_9_21770001 chr2L_21770001 RAL-911 418 chr2L 21981674 21981701 chr2L 21990855 21990885 roo 6 9181 4.5 1.5 3.0 1.5 9211 chr2L 21981674 exon CG2528 - chr2L 21986280 intron CG2528 - chr2L 21990885 exon CG2528 - chr2L_6_21985001 chr2L_21985001 RAL-911 419 chr2L 22047233 22047249 chr2L 22047378 22047394 5 145 3.0 2.5 2.8 1.3 161 chr2L 22047233 intergenic not near genes chr2L 22047314 intergenic not near genes chr2L 22047394 intergenic not near genes chr2L_5_22045001 chr2L_22045001 RAL-911 420 chr2L 22073430 22073434 chr2L 22073533 22073537 4 102 6.5 8.0 7.2 0.5 107 chr2L 22073430 intergenic not near genes chr2L 22073484 intergenic not near genes chr2L 22073537 intergenic not near genes chr2L_4_22070001 chr2L_22070001 RAL-911 421 chr2L 22136350 22136398 chr2L 22136453 22136500 9 96 5.0 8.0 6.5 1.2 150 chr2L 22136350 intron CG42748 + chr2L 22136425 intron CG42748 + chr2L 22136500 intron CG42748 + chr2L_9_22135001 chr2L_22135001 RAL-911 422 chr2L 22165513 22165544 chr2L 22165603 22165643 8 101 8.5 9.5 9.0 0.8 130 chr2L 22165513 3` UTR CG42748 + chr2L 22165578 3` UTR CG42748 + chr2L 22165643 3` UTR CG42748 + chr2L_8_22165001 chr2L_22165001 RAL-911 423 chr2L 22191832 22192055 chr2L 22191940 22192159 17 102 3.5 4.5 4.0 3.4 327 chr2L 22191832 intron Ir40a - chr2L 22191996 intron Ir40a - chr2L 22192159 intron Ir40a - chr2L_17_22190001 chr2L_22190001 RAL-911 424 chr2L 22258592 22258628 chr2L 22260737 22260773 G6 5 2142 3.0 1.0 2.0 1.7 2181 chr2L 22258592 intergenic Tif-IA + chr2L 22259682 intergenic not near genes chr2L 22260773 intergenic not near genes chr2L_5_22255001 chr2L_22255001 RAL-911 425 chr2L 22350243 22350284 chr2L 22350364 22350384 5 117 3.0 2.0 2.5 1.4 141 chr2L 22350243 intron CG17018 + chr2L 22350314 intron CG17018 + chr2L 22350384 intron CG17018 + chr2L_5_22350001 chr2L_22350001 RAL-911 426 chr2L 22531511 22531513 chr2L 22531683 22531685 4 172 3.0 8.5 5.8 0.6 174 chr2L 22531511 intergenic not near genes chr2L 22531598 intergenic not near genes chr2L 22531685 intergenic not near genes chr2L_4_22530001 chr2L_22530001 RAL-911 427 chr2L 22534602 22534633 chr2L 22534709 22534738 8 115 2.5 5.5 4.0 1.6 136 chr2L 22534602 3` UTR RpL5 - chr2L 22534670 3` UTR RpL5 - chr2L 22534738 3` UTR RpL5 - chr2L_8_22530001 chr2L_22530001 RAL-911 428 chr2L 22545966 22546011 chr2L 22546082 22546124 7 106 1.5 1.5 1.5 2.8 158 chr2L 22545966 intron CG17490 + chr2L 22546045 intron CG17490 + chr2L 22546124 intron CG17490 + chr2L_7_22545001 chr2L_22545001 RAL-911 429 chr2L 22548929 22548942 chr2L 22550134 22550187 1360 7 1235 0.5 7.5 4.0 1.4 1258 chr2L 22548929 intergenic CG17490 + chr2L 22549558 intergenic not near genes chr2L 22550187 intergenic CG17493 + chr2L_7_22545001 chr2L_22545001 RAL-911 430 chr2L 22581958 22581993 chr2L 22583766 22583790 S-element 9 1806 6.5 2.0 4.2 1.7 1832 chr2L 22581958 intron CG17494 + chr2L 22582874 intron CG17494 + chr2L 22583790 intron CG17494 + chr2L_9_22580001 chr2L_22580001 RAL-911 431 chr2L 22674047 22674072 chr2L 22674144 22674168 5 97 4.0 2.0 3.0 1.2 121 chr2L 22674047 intron CG40006 - chr2L 22674108 intron CG40006 - chr2L 22674168 intron CG40006 - chr2L_5_22670001 chr2L_22670001 RAL-911 432 chr2L 22676115 22676149 chr2L 22676373 22676406 7 258 2.0 5.5 3.8 1.5 291 chr2L 22676115 intron CG40006 - chr2L 22676260 intron CG40006 - chr2L 22676406 intron CG40006 - chr2L_7_22675001 chr2L_22675001 RAL-911 433 chr2L 22776406 22776451 chr2L 22778215 22778260 S-element 13 1809 4.0 5.5 4.8 2.2 1854 chr2L 22776406 intergenic not near genes chr2L 22777333 intergenic not near genes chr2L 22778260 intergenic not near genes chr2L_13_22775001 chr2L_22775001 RAL-911 434 chr2R 1082366 1082380 chr2R 1087161 1087176 Doc 4 4794 1.5 9.0 5.2 0.6 4810 chr2R 1082366 intron rl + chr2R 1084771 intron rl + chr2R 1087176 intron rl + chr2R_4_1080001 chr2R_1080001 RAL-911 435 chr2R 1365857 1365893 chr2R 1365976 1366024 15 119 2.0 3.0 2.5 4.3 167 chr2R 1365857 intron l(2)41Ab + chr2R 1365940 intron l(2)41Ab + chr2R 1366024 intron l(2)41Ab + chr2R_15_1365001 chr2R_1365001 RAL-911 436 chr2R 1516586 1516602 chr2R 1521333 1521350 1731 8 4748 15.5 12.0 13.8 0.5 4764 chr2R 1516586 exon Maf1 - chr2R 1518968 intron Maf1 - chr2R 1521350 5` UTR Maf1 - chr2R_8_1515001 chr2R_1515001 RAL-911 437 chr2R 1755925 1755959 chr2R 1756059 1756093 5 134 2.5 1.5 2.0 1.7 168 chr2R 1755925 intron CG41520 + chr2R 1756009 intron CG41520 + chr2R 1756093 intron CG41520 + chr2R_5_1755001 chr2R_1755001 RAL-911 438 chr2R 2015114 2015163 chr2R 2015211 2015260 5 96 3.0 3.0 3.0 1.2 146 chr2R 2015114 intron CG17684 - chr2R 2015187 intron CG17684 - chr2R 2015260 intron CG17684 - chr2R_5_2015001 chr2R_2015001 RAL-911 439 chr2R 2110486 2110498 chr2R 2118063 2118073 17.6 4 7577 2.0 2.5 2.2 1.2 7587 chr2R 2110486 intron CG17684 - chr2R 2114280 intron CG17684 - chr2R 2118073 intron CG17684 - chr2R_4_2110001 chr2R_2110001 RAL-911 440 chr2R 2498967 2499016 chr2R 2508134 2508183 roo 7 9164 4.0 4.0 4.0 1.4 9216 chr2R 2498967 intron MFS17 - chr2R 2503575 intron MFS17 - chr2R 2508183 intron MFS17 - chr2R_7_2500001 chr2R_2500001 RAL-911 441 chr2R 3515263 3515310 chr2R 3515371 3515418 7 108 14.0 10.5 12.2 0.5 155 chr2R 3515263 intergenic not near genes chr2R 3515340 intergenic not near genes chr2R 3515418 intergenic not near genes chr2R_7_3515001 chr2R_3515001 RAL-911 442 chr2R 3532598 3532642 chr2R 3536061 3536105 Doc 8 3463 3.0 3.5 3.2 1.9 3507 chr2R 3532598 intergenic not near genes chr2R 3534352 intergenic not near genes chr2R 3536105 intergenic not near genes chr2R_8_3530001 chr2R_3530001 RAL-911 443 chr2R 4312932 4312986 chr2R 4313036 4313090 15 104 4.5 2.0 3.2 3.6 158 chr2R 4312932 intergenic not near genes chr2R 4313011 intergenic not near genes chr2R 4313090 intergenic not near genes chr2R_15_4310001 chr2R_4310001 RAL-911 444 chr2R 4621299 4621346 chr2R 4621858 4621906 9 556 3.0 2.5 2.8 2.4 607 chr2R 4621299 3` UTR CR44101 - chr2R 4621602 3` UTR CR44101 - chr2R 4621906 3` UTR CR44101 - chr2R_9_4620001 chr2R_4620001 RAL-911 445 chr2R 4622936 4622979 chr2R 4624115 4624148 1360 8 1177 2.0 3.0 2.5 2.3 1212 chr2R 4622936 intergenic CR44101 - chr2R 4623542 intergenic not near genes chr2R 4624148 intergenic not near genes chr2R_8_4620001 chr2R_4620001 RAL-911 446 chr2R 4634628 4634648 chr2R 4634728 4634747 7 99 9.0 8.0 8.5 0.7 119 chr2R 4634628 intergenic not near genes chr2R 4634688 intergenic not near genes chr2R 4634747 intergenic not near genes chr2R_7_4630001 chr2R_4630001 RAL-911 447 chr2R 4751713 4751726 chr2R 4751827 4751840 5 114 1.5 8.0 4.8 0.9 127 chr2R 4751713 intron conu + chr2R 4751776 intron conu + chr2R 4751840 intron conu + chr2R_5_4750001 chr2R_4750001 RAL-911 448 chr2R 4782776 4782784 chr2R 4782861 4782874 4 104 5.5 4.5 5.0 0.7 98 chr2R 4782776 intergenic not near genes chr2R 4782825 intergenic not near genes chr2R 4782874 intergenic not near genes chr2R_4_4780001 chr2R_4780001 RAL-911 449 chr2R 4783242 4783267 chr2R 4783396 4783420 4 154 0.5 5.5 3.0 1.0 178 chr2R 4783242 intergenic not near genes chr2R 4783331 intergenic not near genes chr2R 4783420 intergenic not near genes chr2R_4_4780001 chr2R_4780001 RAL-911 450 chr2R 4821201 4821246 chr2R 4821307 4821344 10 104 3.5 5.0 4.2 1.9 143 chr2R 4821201 intron CG17528 - chr2R 4821272 intron CG17528 - chr2R 4821344 intron CG17528 - chr2R_10_4820001 chr2R_4820001 RAL-911 451 chr2R 4870723 4870741 chr2R 4871254 4871272 R1A1-element 4 528 1.0 2.0 1.5 1.6 549 chr2R 4870723 intergenic not near genes chr2R 4870998 intergenic not near genes chr2R 4871272 intergenic not near genes chr2R_4_4870001 chr2R_4870001 RAL-911 452 chr2R 4887601 4887639 chr2R 4887817 4887854 10 215 2.5 2.0 2.2 3.1 253 chr2R 4887601 intergenic not near genes chr2R 4887728 intergenic not near genes chr2R 4887854 intergenic not near genes chr2R_10_4885001 chr2R_4885001 RAL-911 453 chr2R 5019267 5019312 chr2R 5019362 5019397 13 102 1.5 2.0 1.8 4.6 130 chr2R 5019267 intron Ir41a + chr2R 5019332 intron Ir41a + chr2R 5019397 intron Ir41a + chr2R_13_5015001 chr2R_5015001 RAL-911 454 chr2R 5075252 5075370 chr2R 5075763 5075806 7 444 0.0 3.0 1.5 2.8 554 chr2R 5075252 intergenic not near genes chr2R 5075529 intergenic not near genes chr2R 5075806 intergenic not near genes chr2R_7_5075001 chr2R_5075001 RAL-911 455 chr2R 5080775 5080809 chr2R 5080881 5080920 4 110 3.0 4.0 3.5 0.9 145 chr2R 5080775 intergenic not near genes chr2R 5080848 intergenic not near genes chr2R 5080920 intergenic not near genes chr2R_4_5080001 chr2R_5080001 RAL-911 456 chr2R 5301570 5301611 chr2R 5301676 5301717 5 106 3.5 8.0 5.8 0.7 147 chr2R 5301570 intergenic not near genes chr2R 5301644 intergenic not near genes chr2R 5301717 intergenic not near genes chr2R_5_5300001 chr2R_5300001 RAL-911 457 chr2R 5417976 5418009 chr2R 5420628 5420654 Burdock 8 2648 4.0 3.0 3.5 1.8 2678 chr2R 5417976 intron laccase2 + chr2R 5419315 intron laccase2 + chr2R 5420654 intron laccase2 + chr2R_8_5415001 chr2R_5415001 RAL-911 458 chr2R 5476335 5476364 chr2R 5476899 5476921 13 562 6.0 1.5 3.8 2.7 586 chr2R 5476335 intron CG30440 - chr2R 5476628 intron CG30440 - chr2R 5476921 intron CG30440 - chr2R_13_5475001 chr2R_5475001 RAL-911 459 chr2R 5541928 5541962 chr2R 5542174 5542215 8 252 4.0 3.5 3.8 1.7 287 chr2R 5541928 intron CG30438 + chr2R 5542072 intron CG30438 + chr2R 5542215 intron CG30438 + chr2R_8_5540001 chr2R_5540001 RAL-911 460 chr2R 5543206 5543221 chr2R 5547310 5547325 invader1 5 4103 0.0 11.0 5.5 0.8 4119 chr2R 5543206 intron CG30438 + chr2R 5545266 intron CG30438 + chr2R 5547325 intron CG30438 + chr2R_5_5545001 chr2R_5545001 RAL-911 461 chr2R 5750435 5750448 chr2R 5750547 5750560 6 112 7.0 3.0 5.0 1.0 125 chr2R 5750435 intergenic not near genes chr2R 5750498 intergenic not near genes chr2R 5750560 intergenic not near genes chr2R_6_5750001 chr2R_5750001 RAL-911 462 chr2R 5771477 5771490 chr2R 5771543 5771586 4 84 0.5 1.5 1.0 2.0 109 chr2R 5771477 intron Gp210 + chr2R 5771532 intron Gp210 + chr2R 5771586 intron Gp210 + chr2R_4_5770001 chr2R_5770001 RAL-911 463 chr2R 5772511 5772548 chr2R 5772599 5772635 7 92 4.0 4.0 4.0 1.4 124 chr2R 5772511 3` UTR Gp210 + chr2R 5772573 3` UTR Gp210 + chr2R 5772635 3` UTR Gp210 + chr2R_7_5770001 chr2R_5770001 RAL-911 464 chr2R 5869283 5869306 chr2R 5874352 5874387 flea 9 5089 4.5 4.0 4.2 1.7 5104 chr2R 5869283 intergenic not near genes chr2R 5871835 intergenic not near genes chr2R 5874387 intergenic not near genes chr2R_9_5870001 chr2R_5870001 RAL-911 465 chr2R 5902140 5902191 chr2R 5909718 5909770 17.6 4 7579 2.0 4.5 3.2 1.0 7630 chr2R 5902140 intron CG43366 + chr2R 5905955 intron CG43366 + chr2R 5909770 intron CG43366 + chr2R_4_5905001 chr2R_5905001 RAL-911 466 chr2R 5947065 5947081 chr2R 5947194 5947222 8 136 5.5 4.5 5.0 1.3 157 chr2R 5947065 intergenic not near genes chr2R 5947144 intergenic not near genes chr2R 5947222 intergenic not near genes chr2R_8_5945001 chr2R_5945001 RAL-911 467 chr2R 6065735 6065780 chr2R 6065863 6065884 4 107 1.5 0.0 0.8 2.2 149 chr2R 6065735 intron CCHa2-R + chr2R 6065810 intron CCHa2-R + chr2R 6065884 exon CCHa2-R + chr2R_4_6065001 chr2R_6065001 RAL-911 468 chr2R 6088356 6088370 chr2R 6088463 6088483 7 110 9.5 5.5 7.5 0.8 127 chr2R 6088356 intergenic not near genes chr2R 6088420 intergenic not near genes chr2R 6088483 intergenic not near genes chr2R_7_6085001 chr2R_6085001 RAL-911 469 chr2R 6088374 6088388 chr2R 6088486 6088501 5 112 6.0 10.5 8.2 0.5 127 chr2R 6088374 intergenic not near genes chr2R 6088438 intergenic not near genes chr2R 6088501 intergenic not near genes chr2R_5_6085001 chr2R_6085001 RAL-911 470 chr2R 6173532 6173554 chr2R 6173629 6173636 4 91 11.5 2.0 6.8 0.5 104 chr2R 6173532 intergenic Cyp6w1 + chr2R 6173584 intergenic Cyp6w1 + chr2R 6173636 intergenic Cyp6w1 + chr2R_4_6170001 chr2R_6170001 RAL-911 471 chr2R 6236708 6236731 chr2R 6236835 6236856 9 127 1.5 6.5 4.0 1.8 148 chr2R 6236708 intron bin3 + chr2R 6236782 intron bin3 + chr2R 6236856 intron bin3 + chr2R_9_6235001 chr2R_6235001 RAL-911 472 chr2R 6492537 6492556 chr2R 6492633 6492652 5 96 0.0 5.5 2.8 1.3 115 chr2R 6492537 intergenic not near genes chr2R 6492594 intergenic not near genes chr2R 6492652 intergenic not near genes chr2R_5_6490001 chr2R_6490001 RAL-911 473 chr2R 6539810 6539852 chr2R 6539953 6539995 15 143 1.0 5.5 3.2 3.6 185 chr2R 6539810 intron jing + chr2R 6539902 intron jing + chr2R 6539995 intron jing + chr2R_15_6535001 chr2R_6535001 RAL-911 474 chr2R 6546698 6546746 chr2R 6546819 6546867 14 121 3.5 1.5 2.5 4.0 169 chr2R 6546698 intron jing + chr2R 6546782 intron jing + chr2R 6546867 intron jing + chr2R_14_6545001 chr2R_6545001 RAL-911 475 chr2R 6579752 6579806 chr2R 6584858 6584897 flea 20 5105 3.5 2.5 3.0 5.0 5145 chr2R 6579752 intron jing + chr2R 6582324 intron jing + chr2R 6584897 intron jing + chr2R_20_6580001 chr2R_6580001 RAL-911 476 chr2R 6607937 6607956 chr2R 6608037 6608076 4 116 4.0 2.0 3.0 1.0 139 chr2R 6607937 intron jing + chr2R 6608006 intron jing + chr2R 6608076 intron jing + chr2R_4_6605001 chr2R_6605001 RAL-911 477 chr2R 6952151 6952183 chr2R 6959751 6959782 opus 9 7600 4.5 5.0 4.8 1.6 7631 chr2R 6952151 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955966 intron,intron mim -,CheB42c - chr2R 6959782 intron,intron mim -,CheB42c - chr2R_9_6955001 chr2R_6955001 RAL-911 478 chr2R 6964264 6964317 chr2R 6964361 6964413 22 94 5.0 3.0 4.0 4.4 149 chr2R 6964264 intron,intron mim -,CheB42c - chr2R 6964338 intron,intron mim -,CheB42c - chr2R 6964413 intron,intron mim -,CheB42c - chr2R_22_6960001 chr2R_6960001 RAL-911 479 chr2R 7009276 7009327 chr2R 7009630 7009674 12 352 5.5 7.0 6.2 1.7 398 chr2R 7009276 intergenic Tsp42Ed - chr2R 7009475 intergenic Tsp42Ed - chr2R 7009674 3` UTR Tsp42Ed - chr2R_12_7005001 chr2R_7005001 RAL-911 480 chr2R 7052049 7052062 chr2R 7052118 7052161 6 90 0.5 3.5 2.0 2.0 112 chr2R 7052049 intergenic lbm + chr2R 7052105 intergenic lbm + chr2R 7052161 intergenic lbm + chr2R_6_7050001 chr2R_7050001 RAL-911 481 chr2R 7064899 7064914 chr2R 7064995 7065009 4 96 12.5 0.5 6.5 0.5 110 chr2R 7064899 intron Tsp42Er + chr2R 7064954 intron Tsp42Er + chr2R 7065009 intron Tsp42Er + chr2R_4_7060001 chr2R_7060001 RAL-911 482 chr2R 7067575 7067624 chr2R 7067679 7067728 15 104 3.0 2.5 2.8 3.9 153 chr2R 7067575 intergenic not near genes chr2R 7067652 intergenic not near genes chr2R 7067728 intergenic not near genes chr2R_15_7065001 chr2R_7065001 RAL-911 483 chr2R 7091202 7091242 chr2R 7091295 7091344 24 100 4.0 5.0 4.5 4.4 142 chr2R 7091202 intron esn + chr2R 7091273 intron esn + chr2R 7091344 intron esn + chr2R_24_7090001 chr2R_7090001 RAL-911 484 chr2R 7164101 7164121 chr2R 7164245 7164264 4 148 6.0 5.0 5.5 0.6 163 chr2R 7164101 intron pk + chr2R 7164182 intron pk + chr2R 7164264 intron pk + chr2R_4_7160001 chr2R_7160001 RAL-911 485 chr2R 7196552 7196595 chr2R 7201347 7201390 F-element 16 4794 3.0 6.0 4.5 2.9 4838 chr2R 7196552 intron pk + chr2R 7198971 intron pk + chr2R 7201390 intron pk + chr2R_16_7195001 chr2R_7195001 RAL-911 486 chr2R 7235801 7235851 chr2R 7240912 7240949 jockey 5 5101 2.5 3.0 2.8 1.3 5148 chr2R 7235801 intergenic not near genes chr2R 7238375 intergenic not near genes chr2R 7240949 intergenic not near genes chr2R_5_7235001 chr2R_7235001 RAL-911 487 chr2R 7353377 7353419 chr2R 7353492 7353544 5 123 2.5 1.0 1.8 1.8 167 chr2R 7353377 intron Dscam1 - chr2R 7353460 intron Dscam1 - chr2R 7353544 intron Dscam1 - chr2R_5_7350001 chr2R_7350001 RAL-911 488 chr2R 7389550 7389573 chr2R 7389672 7389692 4 121 7.5 3.5 5.5 0.6 142 chr2R 7389550 intron CG11107 + chr2R 7389621 intron CG11107 + chr2R 7389692 intron CG11107 + chr2R_4_7385001 chr2R_7385001 RAL-911 489 chr2R 7417887 7418165 chr2R 7417993 7418264 12 99 5.5 2.5 4.0 2.4 377 chr2R 7417887 intergenic not near genes chr2R 7418076 intergenic not near genes chr2R 7418264 intergenic not near genes chr2R_12_7415001 chr2R_7415001 RAL-911 490 chr2R 7434882 7434915 chr2R 7439201 7439223 Juan 7 4319 5.0 5.0 5.0 1.2 4341 chr2R 7434882 intergenic so + chr2R 7437052 intergenic not near genes chr2R 7439223 intergenic not near genes chr2R_7_7435001 chr2R_7435001 RAL-911 491 chr2R 7459263 7459281 chr2R 7459371 7459389 6 108 7.0 3.0 5.0 1.0 126 chr2R 7459263 intergenic Inos -,CG11141 - chr2R 7459326 intergenic CG11141 -,Inos - chr2R 7459389 intergenic CG11141 - chr2R_6_7455001 chr2R_7455001 RAL-911 492 chr2R 7475418 7475459 chr2R 7475536 7475574 12 117 2.5 8.0 5.2 1.9 156 chr2R 7475418 intron Aldh-III - chr2R 7475496 5` UTR Aldh-III - chr2R 7475574 intron Aldh-III - chr2R_12_7475001 chr2R_7475001 RAL-911 493 chr2R 7631149 7631202 chr2R 7631267 7631307 15 114 3.5 1.5 2.5 4.3 158 chr2R 7631149 intron CG43340 + chr2R 7631228 intron CG43340 + chr2R 7631307 intron CG43340 + chr2R_15_7630001 chr2R_7630001 RAL-911 494 chr2R 7777559 7777599 chr2R 7777675 7777705 10 110 1.5 2.0 1.8 3.6 146 chr2R 7777559 intron,intron CG30497 -,CG45093 - chr2R 7777632 intron,intron CG30497 -,CG45093 - chr2R 7777705 intron,intron CG30497 -,CG45093 - chr2R_10_7775001 chr2R_7775001 RAL-911 495 chr2R 7815650 7815697 chr2R 7822139 7822158 Burdock 12 6483 3.0 2.5 2.8 3.2 6508 chr2R 7815650 intergenic CG1882 + chr2R 7818904 intergenic not near genes chr2R 7822158 3` UTR cathD - chr2R_12_7815001 chr2R_7815001 RAL-911 496 chr2R 7862240 7862248 chr2R 7867373 7867381 flea 4 5133 3.0 5.5 4.2 0.8 5141 chr2R 7862240 intron Dgk - chr2R 7864810 intron Dgk - chr2R 7867381 intron Dgk - chr2R_4_7860001 chr2R_7860001 RAL-911 497 chr2R 7869196 7869209 chr2R 7873977 7874001 Doc 6 4796 6.0 2.0 4.0 1.2 4805 chr2R 7869196 intron Dgk - chr2R 7871598 intron Dgk - chr2R 7874001 intron Dgk - chr2R_6_7870001 chr2R_7870001 RAL-911 498 chr2R 7897136 7897152 chr2R 7897236 7897261 4 106 0.0 3.5 1.8 1.4 125 chr2R 7897136 intron CG30377 + chr2R 7897198 intron CG30377 + chr2R 7897261 intron CG30377 + chr2R_4_7895001 chr2R_7895001 RAL-911 499 chr2R 7916406 7916443 chr2R 7916511 7916536 6 96 3.5 4.5 4.0 1.2 130 chr2R 7916406 5` UTR CG12159 - chr2R 7916471 5` UTR CG12159 - chr2R 7916536 intergenic CG12159 -,Cul1 + chr2R_6_7915001 chr2R_7915001 RAL-911 500 chr2R 7997420 7997454 chr2R 7997546 7997579 12 125 1.0 4.5 2.8 3.2 159 chr2R 7997420 intron Hey - chr2R 7997500 intron Hey - chr2R 7997579 intron Hey - chr2R_12_7995001 chr2R_7995001 RAL-911 501 chr2R 8089241 8089286 chr2R 8089347 8089392 13 104 3.0 2.0 2.5 3.7 151 chr2R 8089241 3` UTR sut2 + chr2R 8089316 intergenic sut2 +,sut3 + chr2R 8089392 intergenic sut3 +,sut2 + chr2R_13_8085001 chr2R_8085001 RAL-911 502 chr2R 8166544 8166546 chr2R 8168720 8168755 4 2181 18.0 12.5 15.2 0.2 2211 chr2R 8166544 exon Rs1 + chr2R 8167650 exon Rs1 + chr2R 8168755 exon Gasz + chr2R_4_8165001 chr2R_8165001 RAL-911 503 chr2R 8185971 8186018 chr2R 8187054 8187100 7 1079 1.0 2.0 1.5 2.8 1129 chr2R 8185971 intron LRP1 + chr2R 8186536 intron LRP1 + chr2R 8187100 intron LRP1 + chr2R_7_8185001 chr2R_8185001 RAL-911 504 chr2R 8236019 8236060 chr2R 8236120 8236160 7 101 3.0 3.0 3.0 1.8 141 chr2R 8236019 intergenic not near genes chr2R 8236090 intergenic not near genes chr2R 8236160 intergenic not near genes chr2R_7_8235001 chr2R_8235001 RAL-911 505 chr2R 8277621 8277643 chr2R 8277736 8277758 4 115 6.0 1.5 3.8 0.8 137 chr2R 8277621 5` UTR CR44280 + chr2R 8277690 5` UTR CR44280 + chr2R 8277758 5` UTR CR44280 + chr2R_4_8275001 chr2R_8275001 RAL-911 506 chr2R 8330858 8330883 chr2R 8331364 8331367 roo 7 502 3.5 4.5 4.0 1.4 509 chr2R 8330858 intron pdm3 + chr2R 8331112 intron pdm3 + chr2R 8331367 intron pdm3 + chr2R_7_8330001 chr2R_8330001 RAL-911 507 chr2R 8355246 8355274 chr2R 8355350 8355378 6 103 2.0 5.0 3.5 1.3 132 chr2R 8355246 intron pdm3 + chr2R 8355312 intron pdm3 + chr2R 8355378 intron pdm3 + chr2R_6_8355001 chr2R_8355001 RAL-911 508 chr2R 8403433 8403455 chr2R 8403531 8403558 6 102 0.0 3.5 1.8 2.1 125 chr2R 8403433 intron CG2121 - chr2R 8403496 intron CG2121 - chr2R 8403558 intron CG2121 - chr2R_6_8400001 chr2R_8400001 RAL-911 509 chr2R 8454930 8454985 chr2R 8455880 8455908 4 944 21.0 27.0 24.0 0.2 978 chr2R 8454930 exon Mal-A2 + chr2R 8455419 exon Mal-A2 + chr2R 8455908 3` UTR Mal-A3 - chr2R_4_8455001 chr2R_8455001 RAL-911 510 chr2R 8566046 8566065 chr2R 8566983 8567027 1360 5 958 4.0 0.0 2.0 1.7 981 chr2R 8566046 5` UTR Cyp6a14 - chr2R 8566536 5` UTR Cyp6a14 - chr2R 8567027 5` UTR Cyp6a14 - chr2R_5_8565001 chr2R_8565001 RAL-911 511 chr2R 8572238 8572282 chr2R 8572517 8572531 8 274 4.0 0.0 2.0 2.7 293 chr2R 8572238 intergenic Cyp6a13 + chr2R 8572384 intergenic Cyp6a13 + chr2R 8572531 intergenic Cyp6a13 + chr2R_8_8570001 chr2R_8570001 RAL-911 512 chr2R 8615755 8615802 chr2R 8615888 8615906 10 124 5.0 2.0 3.5 2.2 151 chr2R 8615755 intron Cirl + chr2R 8615830 intron Cirl + chr2R 8615906 5` UTR Cirl + chr2R_10_8615001 chr2R_8615001 RAL-911 513 chr2R 8722745 8722780 chr2R 8723004 8723013 pogo 5 243 4.5 2.5 3.5 1.1 268 chr2R 8722745 intron CG14767 - chr2R 8722879 intron CG14767 - chr2R 8723013 intron CG14767 - chr2R_5_8720001 chr2R_8720001 RAL-911 514 chr2R 8777889 8777937 chr2R 8784100 8784148 diver 9 6208 6.0 4.0 5.0 1.5 6259 chr2R 8777889 intergenic not near genes chr2R 8781018 intergenic not near genes chr2R 8784148 intergenic not near genes chr2R_9_8780001 chr2R_8780001 RAL-911 515 chr2R 9031388 9031431 chr2R 9031485 9031488 8 90 1.5 0.0 0.8 4.4 100 chr2R 9031388 intergenic CG8170 - chr2R 9031438 intergenic CG8170 - chr2R 9031488 intergenic CG8170 - chr2R_8_9030001 chr2R_9030001 RAL-911 516 chr2R 9151282 9151334 chr2R 9157772 9157811 Burdock 17 6488 5.5 6.5 6.0 2.4 6529 chr2R 9151282 exon CG30345 + chr2R 9154546 intergenic not near genes chr2R 9157811 intergenic CG8008 - chr2R_17_9150001 chr2R_9150001 RAL-911 517 chr2R 9161955 9162004 chr2R 9162060 9162108 14 99 3.5 3.0 3.2 3.3 153 chr2R 9161955 5` UTR CR44283 + chr2R 9162032 intergenic CG8046 -,CR44283 + chr2R 9162108 3` UTR CG8046 - chr2R_14_9160001 chr2R_9160001 RAL-911 518 chr2R 9183131 9183157 chr2R 9183221 9183259 7 100 1.0 5.0 3.0 1.8 128 chr2R 9183131 intron ltd - chr2R 9183195 intron ltd - chr2R 9183259 intron ltd - chr2R_7_9180001 chr2R_9180001 RAL-911 519 chr2R 9230203 9230235 chr2R 9230303 9230320 4 93 1.5 1.0 1.2 1.8 117 chr2R 9230203 intron hig - chr2R 9230262 intron hig - chr2R 9230320 exon hig - chr2R_4_9230001 chr2R_9230001 RAL-911 520 chr2R 9258409 9258426 chr2R 9258519 9258535 6 110 8.5 3.5 6.0 0.9 126 chr2R 9258409 intron Pkn - chr2R 9258472 intron Pkn - chr2R 9258535 intron Pkn - chr2R_6_9255001 chr2R_9255001 RAL-911 521 chr2R 9265252 9265287 chr2R 9265455 9265491 7 199 0.5 1.5 1.0 3.5 239 chr2R 9265252 intron Pkn - chr2R 9265372 intron Pkn - chr2R 9265491 exon Pkn - chr2R_7_9265001 chr2R_9265001 RAL-911 522 chr2R 9267962 9268010 chr2R 9268068 9268116 9 104 1.5 1.0 1.2 4.1 154 chr2R 9267962 exon Pkn - chr2R 9268039 intron Pkn - chr2R 9268116 intron Pkn - chr2R_9_9265001 chr2R_9265001 RAL-911 523 chr2R 9388635 9388687 chr2R 9388742 9388784 7 104 2.0 3.0 2.5 2.0 149 chr2R 9388635 5` UTR CG13954 - chr2R 9388710 5` UTR CG13954 - chr2R 9388784 5` UTR CG13954 - chr2R_7_9385001 chr2R_9385001 RAL-911 524 chr2R 9408228 9408252 chr2R 9408319 9408355 5 100 4.0 5.0 4.5 0.9 127 chr2R 9408228 intron wun - chr2R 9408292 intron wun - chr2R 9408355 intron wun - chr2R_5_9405001 chr2R_9405001 RAL-911 525 chr2R 9418739 9418772 chr2R 9418844 9418884 9 111 1.5 2.5 2.0 3.0 145 chr2R 9418739 intergenic not near genes chr2R 9418812 intergenic not near genes chr2R 9418884 intergenic not near genes chr2R_9_9415001 chr2R_9415001 RAL-911 526 chr2R 9480058 9480105 chr2R 9490609 9490656 roo 13 10550 3.0 3.0 3.0 3.2 10598 chr2R 9480058 intergenic not near genes chr2R 9485357 intergenic not near genes chr2R 9490656 intergenic not near genes chr2R_13_9485001 chr2R_9485001 RAL-911 527 chr2R 9561830 9561844 chr2R 9561938 9561952 5 108 0.0 1.0 0.5 3.3 122 chr2R 9561830 3` UTR,intron CR45281 -,CG1809 + chr2R 9561891 3` UTR,intron CR45281 -,CG1809 + chr2R 9561952 3` UTR,intron CR45281 -,CG1809 + chr2R_5_9560001 chr2R_9560001 RAL-911 528 chr2R 9642480 9642503 chr2R 9642862 9642878 8 380 4.5 5.0 4.8 1.4 398 chr2R 9642480 intron Mmp2 - chr2R 9642679 intron Mmp2 - chr2R 9642878 intron Mmp2 - chr2R_8_9640001 chr2R_9640001 RAL-911 529 chr2R 9667247 9667280 chr2R 9667343 9667375 7 96 3.0 1.5 2.2 2.2 128 chr2R 9667247 intron Mmp2 - chr2R 9667311 intron Mmp2 - chr2R 9667375 exon Mmp2 - chr2R_7_9665001 chr2R_9665001 RAL-911 530 chr2R 9726602 9726637 chr2R 9734168 9734208 17.6 7 7570 4.0 4.0 4.0 1.4 7606 chr2R 9726602 intron sqa - chr2R 9730405 intron sqa - chr2R 9734208 intron sqa - chr2R_7_9730001 chr2R_9730001 RAL-911 531 chr2R 9789068 9789127 chr2R 9789186 9789233 12 108 0.0 2.5 1.2 5.5 165 chr2R 9789068 intron,5` UTR CG1688 -,CR44208 + chr2R 9789150 intron,5` UTR CG1688 -,CR44208 + chr2R 9789233 intron,5` UTR CG1688 -,CR44208 + chr2R_12_9785001 chr2R_9785001 RAL-911 532 chr2R 9869650 9869700 chr2R 9869781 9869831 10 131 2.0 1.0 1.5 4.0 181 chr2R 9869650 intron cbx - chr2R 9869740 intron cbx - chr2R 9869831 intron cbx - chr2R_10_9865001 chr2R_9865001 RAL-911 533 chr2R 9945420 9945458 chr2R 9945636 9945673 BS 6 211 2.0 2.0 2.0 2.0 253 chr2R 9945420 intron Mef2 - chr2R 9945546 intron Mef2 - chr2R 9945673 intron Mef2 - chr2R_6_9945001 chr2R_9945001 RAL-911 534 chr2R 10047213 10047247 chr2R 10047320 10047350 5 104 4.0 2.5 3.2 1.2 137 chr2R 10047213 intron oys - chr2R 10047282 intron oys - chr2R 10047350 intron oys - chr2R_5_10045001 chr2R_10045001 RAL-911 535 chr2R 10047808 10047829 chr2R 10047911 10047932 5 103 3.5 6.0 4.8 0.9 124 chr2R 10047808 intron oys - chr2R 10047870 intron oys - chr2R 10047932 intron oys - chr2R_5_10045001 chr2R_10045001 RAL-911 536 chr2R 10171092 10171144 chr2R 10171196 10171246 8 104 1.5 4.0 2.8 2.1 154 chr2R 10171092 intron KCNQ - chr2R 10171169 intron KCNQ - chr2R 10171246 intron KCNQ - chr2R_8_10170001 chr2R_10170001 RAL-911 537 chr2R 10176855 10176908 chr2R 10186045 10186098 roo 18 9190 0.0 4.5 2.2 5.6 9243 chr2R 10176855 intron KCNQ - chr2R 10181476 intron KCNQ - chr2R 10186098 intron KCNQ - chr2R_18_10180001 chr2R_10180001 RAL-911 538 chr2R 10189183 10189232 chr2R 10189281 10189330 13 96 4.0 4.5 4.2 2.5 147 chr2R 10189183 intron KCNQ - chr2R 10189256 intron KCNQ - chr2R 10189330 intron KCNQ - chr2R_13_10185001 chr2R_10185001 RAL-911 539 chr2R 10193206 10193221 chr2R 10193310 10193325 5 104 4.5 3.5 4.0 1.0 119 chr2R 10193206 intergenic not near genes chr2R 10193266 intergenic not near genes chr2R 10193325 intergenic not near genes chr2R_5_10190001 chr2R_10190001 RAL-911 540 chr2R 10354256 10354306 chr2R 10354355 10354405 16 97 5.5 5.0 5.2 2.6 149 chr2R 10354256 intron,3` UTR CG42732 -,CG12907 + chr2R 10354330 intron,3` UTR CG42732 -,CG12907 + chr2R 10354405 intron CG42732 - chr2R_16_10350001 chr2R_10350001 RAL-911 541 chr2R 10372374 10372406 chr2R 10372461 10372497 4 86 3.0 1.5 2.2 1.2 123 chr2R 10372374 intron CG42732 - chr2R 10372436 intron CG42732 - chr2R 10372497 intron CG42732 - chr2R_4_10370001 chr2R_10370001 RAL-911 542 chr2R 10409066 10409069 chr2R 10409156 10409159 4 93 0.5 4.5 2.5 1.1 93 chr2R 10409066 intron CG42732 - chr2R 10409112 intron CG42732 - chr2R 10409159 intron,exon CG42732 -,CG33477 - chr2R_4_10405001 chr2R_10405001 RAL-911 543 chr2R 10411783 10411834 chr2R 10411885 10411910 4 94 1.5 1.0 1.2 1.8 127 chr2R 10411783 intron CG42732 - chr2R 10411846 intron CG42732 - chr2R 10411910 intron CG42732 - chr2R_4_10410001 chr2R_10410001 RAL-911 544 chr2R 10432104 10432144 chr2R 10432236 10432276 12 131 8.5 2.5 5.5 1.8 172 chr2R 10432104 intron RanBPM + chr2R 10432190 intron RanBPM + chr2R 10432276 intron RanBPM + chr2R_12_10430001 chr2R_10430001 RAL-911 545 chr2R 10454078 10454128 chr2R 10454174 10454185 9 83 3.0 2.0 2.5 2.6 107 chr2R 10454078 intron,intron Galphao +,Cyp49a1 - chr2R 10454132 intron,intron Galphao +,Cyp49a1 - chr2R 10454185 intron,intron Galphao +,Cyp49a1 - chr2R_9_10450001 chr2R_10450001 RAL-911 546 chr2R 10622338 10622360 chr2R 10637123 10637137 mdg1 5 14782 8.0 6.0 7.0 0.6 14799 chr2R 10622338 intron CG11883 + chr2R 10629738 intron CG11883 + chr2R 10637137 intron CG11883 + chr2R_5_10625001 chr2R_10625001 RAL-911 547 chr2R 10644045 10644088 chr2R 10644143 10644186 12 98 4.0 0.0 2.0 4.0 141 chr2R 10644045 intron Git - chr2R 10644116 intron Git - chr2R 10644186 intron Git - chr2R_12_10640001 chr2R_10640001 RAL-911 548 chr2R 10658919 10658932 chr2R 10659024 10659031 4 103 2.5 0.0 1.2 1.8 112 chr2R 10658919 intergenic not near genes chr2R 10658975 intergenic not near genes chr2R 10659031 intergenic not near genes chr2R_4_10655001 chr2R_10655001 RAL-911 549 chr2R 10675361 10675377 chr2R 10675462 10675478 6 101 0.0 1.5 0.8 3.3 117 chr2R 10675361 intron stan + chr2R 10675420 intron stan + chr2R 10675478 intron stan + chr2R_6_10675001 chr2R_10675001 RAL-911 550 chr2R 10770980 10771023 chr2R 10771080 10771114 13 99 1.5 4.0 2.8 3.4 134 chr2R 10770980 intron CG33144 - chr2R 10771047 intron CG33144 - chr2R 10771114 intron CG33144 - chr2R_13_10770001 chr2R_10770001 RAL-911 551 chr2R 10790137 10790167 chr2R 10790230 10790275 9 104 3.5 4.5 4.0 1.8 138 chr2R 10790137 intron CG33144 - chr2R 10790206 intron CG33144 - chr2R 10790275 intron CG33144 - chr2R_9_10790001 chr2R_10790001 RAL-911 552 chr2R 10959074 10959091 chr2R 10959169 10959190 4 98 2.0 0.0 1.0 2.0 116 chr2R 10959074 intergenic not near genes chr2R 10959132 intergenic not near genes chr2R 10959190 intergenic not near genes chr2R_4_10955001 chr2R_10955001 RAL-911 553 chr2R 10960854 10960896 chr2R 10960972 10961019 5 114 0.0 1.0 0.5 3.3 165 chr2R 10960854 intergenic not near genes chr2R 10960936 intergenic not near genes chr2R 10961019 intergenic not near genes chr2R_5_10960001 chr2R_10960001 RAL-911 554 chr2R 10974980 10974996 chr2R 10975109 10975124 5 129 7.0 0.0 3.5 1.1 144 chr2R 10974980 intergenic not near genes chr2R 10975052 intergenic not near genes chr2R 10975124 intergenic not near genes chr2R_5_10975001 chr2R_10975001 RAL-911 555 chr2R 10979663 10979685 chr2R 10980152 10980177 297 5 487 2.0 5.5 3.8 1.0 514 chr2R 10979663 intergenic not near genes chr2R 10979920 intergenic not near genes chr2R 10980177 intergenic not near genes chr2R_5_10975001 chr2R_10975001 RAL-911 556 chr2R 11009807 11009821 chr2R 11019001 11019004 roo 5 9192 4.5 2.0 3.2 1.2 9197 chr2R 11009807 intron luna - chr2R 11014406 intron luna - chr2R 11019004 intron luna - chr2R_5_11010001 chr2R_11010001 RAL-911 557 chr2R 11110713 11110750 chr2R 11110859 11110896 10 144 2.5 2.0 2.2 3.1 183 chr2R 11110713 intron luna - chr2R 11110804 intron luna - chr2R 11110896 intron luna - chr2R_10_11110001 chr2R_11110001 RAL-911 558 chr2R 11133806 11133858 chr2R 11133925 11133977 23 119 5.0 4.0 4.5 4.2 171 chr2R 11133806 intergenic not near genes chr2R 11133892 intergenic not near genes chr2R 11133977 intergenic not near genes chr2R_23_11130001 chr2R_11130001 RAL-911 559 chr2R 11150165 11150197 chr2R 11150261 11150293 5 93 1.0 3.5 2.2 1.6 128 chr2R 11150165 intron CG13229 - chr2R 11150229 intron CG13229 - chr2R 11150293 intron CG13229 - chr2R_5_11150001 chr2R_11150001 RAL-911 560 chr2R 11158843 11158882 chr2R 11159032 11159071 10 189 5.5 2.0 3.8 2.1 228 chr2R 11158843 intron CG13229 - chr2R 11158957 intron CG13229 - chr2R 11159071 intron CG13229 - chr2R_10_11155001 chr2R_11155001 RAL-911 561 chr2R 11171522 11171551 chr2R 11171690 11171723 13 174 7.0 6.5 6.8 1.7 201 chr2R 11171522 intron,intron CG13229 -,shn + chr2R 11171622 intron,intron CG13229 -,shn + chr2R 11171723 intron,intron CG13229 -,shn + chr2R_13_11170001 chr2R_11170001 RAL-911 562 chr2R 11207814 11207842 chr2R 11208027 11208055 BS 7 211 4.5 8.0 6.2 1.0 241 chr2R 11207814 intron shn + chr2R 11207934 intron shn + chr2R 11208055 intron shn + chr2R_7_11205001 chr2R_11205001 RAL-911 563 chr2R 11274282 11274310 chr2R 11274500 11274522 8 214 8.0 2.0 5.0 1.3 240 chr2R 11274282 intron TpnC47D - chr2R 11274402 intron TpnC47D - chr2R 11274522 intron TpnC47D - chr2R_8_11270001 chr2R_11270001 RAL-911 564 chr2R 11297626 11297645 chr2R 11301967 11301986 flea 7 4340 2.5 0.5 1.5 2.8 4360 chr2R 11297626 intergenic CG42336 - chr2R 11299806 intergenic not near genes chr2R 11301986 5` UTR CG7741 + chr2R_7_11295001 chr2R_11295001 RAL-911 565 chr2R 11307540 11307576 chr2R 11307645 11307686 10 109 6.0 0.0 3.0 2.5 146 chr2R 11307540 intergenic Fpps -,CG7745 + chr2R 11307613 intergenic Fpps -,CG7745 + chr2R 11307686 intergenic Fpps -,CG7745 + chr2R_10_11305001 chr2R_11305001 RAL-911 566 chr2R 11368010 11368033 chr2R 11368106 11368129 10 93 9.0 5.0 7.0 1.2 119 chr2R 11368010 intron CG13204 + chr2R 11368070 intron CG13204 + chr2R 11368129 intron CG13204 + chr2R_10_11365001 chr2R_11365001 RAL-911 567 chr2R 11415415 11415454 chr2R 11415511 11415537 6 90 5.5 1.5 3.5 1.3 122 chr2R 11415415 intron,3` UTR Drip -,CG7763 + chr2R 11415476 intron Drip - chr2R 11415537 intron Drip - chr2R_6_11415001 chr2R_11415001 RAL-911 568 chr2R 11415550 11415551 chr2R 11418673 11418720 opus 4 3150 2.5 5.0 3.8 0.8 3170 chr2R 11415550 intron Drip - chr2R 11417135 intron Drip - chr2R 11418720 intron Drip - chr2R_4_11415001 chr2R_11415001 RAL-911 569 chr2R 11421651 11421696 chr2R 11421749 11421794 20 100 4.0 5.0 4.5 3.6 143 chr2R 11421651 intron Drip - chr2R 11421722 intron Drip - chr2R 11421794 intron Drip - chr2R_20_11420001 chr2R_11420001 RAL-911 570 chr2R 11472644 11472678 chr2R 11473861 11473883 pogo 4 1211 5.0 4.0 4.5 0.7 1239 chr2R 11472644 intergenic not near genes chr2R 11473264 intergenic not near genes chr2R 11473883 intergenic not near genes chr2R_4_11470001 chr2R_11470001 RAL-911 571 chr2R 11614606 11614785 chr2R 11614713 11614888 17 107 8.0 5.0 6.5 2.3 282 chr2R 11614606 intron tou - chr2R 11614747 intron tou - chr2R 11614888 intron tou - chr2R_17_11610001 chr2R_11610001 RAL-911 572 chr2R 11631390 11631413 chr2R 11631486 11631502 4 96 0.5 4.0 2.2 1.2 112 chr2R 11631390 intron CG9005 - chr2R 11631446 intron CG9005 - chr2R 11631502 intron CG9005 - chr2R_4_11630001 chr2R_11630001 RAL-911 573 chr2R 11672836 11672846 chr2R 11672943 11672953 5 106 2.0 1.0 1.5 2.0 117 chr2R 11672836 intron,exon Roc2 -,Tret1-1 + chr2R 11672894 intron,intron Roc2 -,Tret1-1 + chr2R 11672953 intron,intron Roc2 -,Tret1-1 + chr2R_5_11670001 chr2R_11670001 RAL-911 574 chr2R 11677851 11677867 chr2R 11677973 11677999 5 126 2.0 3.5 2.8 1.3 148 chr2R 11677851 intron,exon Roc2 -,Tret1-2 + chr2R 11677925 intron,3` UTR Roc2 -,Tret1-2 + chr2R 11677999 intron,3` UTR Roc2 -,Tret1-2 + chr2R_5_11675001 chr2R_11675001 RAL-911 575 chr2R 11715163 11715206 chr2R 11715328 11715361 5 162 2.5 3.5 3.0 1.2 198 chr2R 11715163 intron pyr + chr2R 11715262 intron pyr + chr2R 11715361 intron pyr + chr2R_5_11715001 chr2R_11715001 RAL-911 576 chr2R 11724138 11724184 chr2R 11724241 11724287 5 103 3.5 1.5 2.5 1.4 149 chr2R 11724138 intron pyr + chr2R 11724212 intron pyr + chr2R 11724287 intron pyr + chr2R_5_11720001 chr2R_11720001 RAL-911 577 chr2R 12096837 12096850 chr2R 12097286 12097322 4 465 0.5 2.0 1.2 1.8 485 chr2R 12096837 intron jeb - chr2R 12097080 intron jeb - chr2R 12097322 intron jeb - chr2R_4_12095001 chr2R_12095001 RAL-911 578 chr2R 12124810 12124862 chr2R 12124914 12124946 14 102 3.0 2.0 2.5 4.0 136 chr2R 12124810 intergenic not near genes chr2R 12124878 intergenic not near genes chr2R 12124946 intergenic not near genes chr2R_14_12120001 chr2R_12120001 RAL-911 579 chr2R 12185983 12186036 chr2R 12186098 12186151 25 112 6.5 8.5 7.5 2.9 168 chr2R 12185983 intron Cyp6g1 + chr2R 12186067 intron Cyp6g1 + chr2R 12186151 intron Cyp6g1 + chr2R_25_12185001 chr2R_12185001 RAL-911 580 chr2R 12185222 12185232 chr2R 12188130 12188137 4 2906 18.0 87.5 52.8 0.1 2915 chr2R 12185222 3` UTR,exon CG13175 +,CG33964 + chr2R 12186680 exon Cyp6g1 + chr2R 12188137 3` UTR Cyp6g1 + chr2R_4_12185001 chr2R_12185001 RAL-911 581 chr2R 12187472 12187511 chr2R 12190099 12190124 4 2628 37.0 27.0 32.0 0.1 2652 chr2R 12187472 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_4_12185001 chr2R_12185001 RAL-911 582 chr2R 12301892 12301907 chr2R 12301953 12301976 4 75 3.5 1.5 2.5 1.1 84 chr2R 12301892 intron CG8850 - chr2R 12301934 intron CG8850 - chr2R 12301976 intron CG8850 - chr2R_4_12300001 chr2R_12300001 RAL-911 583 chr2R 12529887 12529910 chr2R 12530000 12530023 8 113 5.5 0.0 2.8 2.1 136 chr2R 12529887 intron fra + chr2R 12529955 intron fra + chr2R 12530023 intron fra + chr2R_8_12525001 chr2R_12525001 RAL-911 584 chr2R 12546738 12546776 chr2R 12546835 12546871 7 93 4.0 2.5 3.2 1.7 133 chr2R 12546738 intron fra + chr2R 12546804 intron fra + chr2R 12546871 intron fra + chr2R_7_12545001 chr2R_12545001 RAL-911 585 chr2R 12565546 12565597 chr2R 12565944 12565966 5 381 0.0 2.5 1.2 2.3 420 chr2R 12565546 intergenic not near genes chr2R 12565756 intergenic Cyp301a1 + chr2R 12565966 intergenic Cyp301a1 + chr2R_5_12565001 chr2R_12565001 RAL-911 586 chr2R 12643774 12643811 chr2R 12643870 12643882 5 91 5.0 0.0 2.5 1.4 108 chr2R 12643774 intron CG8785 - chr2R 12643828 intron CG8785 - chr2R 12643882 exon CG8785 - chr2R_5_12640001 chr2R_12640001 RAL-911 587 chr2R 12670364 12670390 chr2R 12670491 12670517 5 127 2.5 0.0 1.2 2.3 153 chr2R 12670364 intergenic CG42708 -,nemy - chr2R 12670440 intergenic CG42708 -,nemy - chr2R 12670517 3` UTR CG42708 - chr2R_5_12670001 chr2R_12670001 RAL-911 588 chr2R 12707497 12707542 chr2R 12715883 12715928 roo 15 8384 8.0 1.5 4.8 2.6 8431 chr2R 12707497 intron CG42663 + chr2R 12711712 intron CG42663 + chr2R 12715928 intron CG42663 + chr2R_15_12710001 chr2R_12710001 RAL-911 589 chr2R 12728851 12728900 chr2R 12728974 12729018 6 119 0.0 2.5 1.2 2.7 167 chr2R 12728851 intron CG42663 + chr2R 12728934 intron CG42663 + chr2R 12729018 intron CG42663 + chr2R_6_12725001 chr2R_12725001 RAL-911 590 chr2R 12777806 12777826 chr2R 12777935 12777955 5 129 0.0 6.5 3.2 1.2 149 chr2R 12777806 5` UTR CR45266 + chr2R 12777880 5` UTR CR45266 + chr2R 12777955 5` UTR CR45266 + chr2R_5_12775001 chr2R_12775001 RAL-911 591 chr2R 12808297 12808345 chr2R 12808411 12808460 14 113 2.0 3.5 2.8 3.7 163 chr2R 12808297 intergenic CG17580 + chr2R 12808378 intergenic not near genes chr2R 12808460 intergenic not near genes chr2R_14_12805001 chr2R_12805001 RAL-911 592 chr2R 12819452 12819475 chr2R 12824541 12824564 jockey 5 5088 3.0 9.5 6.2 0.7 5112 chr2R 12819452 intergenic not near genes chr2R 12822008 intergenic not near genes chr2R 12824564 intergenic not near genes chr2R_5_12820001 chr2R_12820001 RAL-911 593 chr2R 12897457 12897481 chr2R 12897568 12897585 5 109 3.5 4.0 3.8 1.0 128 chr2R 12897457 intron vg + chr2R 12897521 intron vg + chr2R 12897585 intron vg + chr2R_5_12895001 chr2R_12895001 RAL-911 594 chr2R 12951647 12951672 chr2R 12951748 12951773 4 101 0.0 0.5 0.2 3.3 126 chr2R 12951647 intron,intron CG44251 -,CG44250 - chr2R 12951710 intron,intron CG44251 -,CG44250 - chr2R 12951773 intron,intron CG44251 -,CG44250 - chr2R_4_12950001 chr2R_12950001 RAL-911 595 chr2R 13136835 13136852 chr2R 13141643 13141656 Doc 4 4808 3.5 1.0 2.2 1.2 4821 chr2R 13136835 exon Cap-G + chr2R 13139246 intron Cap-G + chr2R 13141656 intron Cap-G + chr2R_4_13135001 chr2R_13135001 RAL-911 596 chr2R 13167411 13167453 chr2R 13167525 13167554 14 113 6.5 0.0 3.2 3.3 143 chr2R 13167411 intron GLaz - chr2R 13167482 intron GLaz - chr2R 13167554 intron GLaz - chr2R_14_13165001 chr2R_13165001 RAL-911 597 chr2R 13196548 13196597 chr2R 13197052 13197100 11 503 2.5 2.0 2.2 3.4 552 chr2R 13196548 intergenic not near genes chr2R 13196824 intergenic not near genes chr2R 13197100 intergenic not near genes chr2R_11_13195001 chr2R_13195001 RAL-911 598 chr2R 13249552 13249589 chr2R 13249661 13249668 9 105 6.0 0.5 3.2 2.1 116 chr2R 13249552 intron CG4712 - chr2R 13249610 intron CG4712 - chr2R 13249668 intron CG4712 - chr2R_9_13245001 chr2R_13245001 RAL-911 599 chr2R 13257246 13257298 chr2R 13257346 13257391 10 97 0.5 4.5 2.5 2.9 145 chr2R 13257246 exon CG4716 + chr2R 13257318 exon CG4716 + chr2R 13257391 3` UTR CG4716 + chr2R_10_13255001 chr2R_13255001 RAL-911 600 chr2R 13309651 13309668 chr2R 13309789 13309806 5 138 6.0 2.0 4.0 1.0 155 chr2R 13309651 intergenic not near genes chr2R 13309728 intergenic not near genes chr2R 13309806 intergenic not near genes chr2R_5_13305001 chr2R_13305001 RAL-911 601 chr2R 13368739 13368784 chr2R 13368868 13368915 4 130 1.0 0.0 0.5 2.7 176 chr2R 13368739 intergenic not near genes chr2R 13368827 intergenic not near genes chr2R 13368915 intergenic not near genes chr2R_4_13365001 chr2R_13365001 RAL-911 602 chr2R 13439096 13439121 chr2R 13439225 13439279 4 149 5.5 0.0 2.8 1.1 183 chr2R 13439096 intergenic CG42321 -,cnn - chr2R 13439188 intergenic cnn -,CG42321 - chr2R 13439279 intergenic cnn -,CG42321 - chr2R_4_13435001 chr2R_13435001 RAL-911 603 chr2R 13439128 13439137 chr2R 13439223 13439291 6 139 2.5 0.0 1.2 2.7 163 chr2R 13439128 intergenic CG42321 -,cnn - chr2R 13439210 intergenic cnn -,CG42321 - chr2R 13439291 intergenic cnn -,CG42321 - chr2R_6_13435001 chr2R_13435001 RAL-911 604 chr2R 13464454 13464484 chr2R 13464764 13464794 7 310 5.0 7.0 6.0 1.0 340 chr2R 13464454 intron arr - chr2R 13464624 intron arr - chr2R 13464794 intron arr - chr2R_7_13460001 chr2R_13460001 RAL-911 605 chr2R 13554739 13554773 chr2R 13554844 13554878 4 104 0.0 4.0 2.0 1.3 139 chr2R 13554739 intron Roe1 + chr2R 13554808 intron Roe1 + chr2R 13554878 intron Roe1 + chr2R_4_13550001 chr2R_13550001 RAL-911 606 chr2R 13566238 13566274 chr2R 13566338 13566371 6 98 3.0 0.0 1.5 2.4 133 chr2R 13566238 intergenic not near genes chr2R 13566304 intergenic not near genes chr2R 13566371 intergenic not near genes chr2R_6_13565001 chr2R_13565001 RAL-911 607 chr2R 13574406 13574432 chr2R 13574480 13574512 6 92 0.5 3.0 1.8 2.1 106 chr2R 13574406 intergenic CG42808 - chr2R 13574459 intergenic CG42808 -,CR44365 + chr2R 13574512 intergenic CG42808 -,CR44365 + chr2R_6_13570001 chr2R_13570001 RAL-911 608 chr2R 13728116 13728161 chr2R 13735793 13735838 opus 12 7677 5.5 5.0 5.2 1.9 7722 chr2R 13728116 intron fas + chr2R 13731977 intron fas + chr2R 13735838 intron fas + chr2R_12_13730001 chr2R_13730001 RAL-911 609 chr2R 13925851 13925889 chr2R 13926024 13926063 6 172 5.0 0.0 2.5 1.7 212 chr2R 13925851 intron shot - chr2R 13925957 intron shot - chr2R 13926063 intron shot - chr2R_6_13925001 chr2R_13925001 RAL-911 610 chr2R 14000221 14000255 chr2R 14000469 14000503 8 248 4.0 2.0 3.0 2.0 282 chr2R 14000221 intron mam + chr2R 14000362 intron mam + chr2R 14000503 intron mam + chr2R_8_14000001 chr2R_14000001 RAL-911 611 chr2R 14037242 14037289 chr2R 14037345 14037392 6 98 0.0 0.5 0.2 5.0 150 chr2R 14037242 intron mam + chr2R 14037317 intron mam + chr2R 14037392 intron mam + chr2R_6_14035001 chr2R_14035001 RAL-911 612 chr2R 14142433 14142472 chr2R 14142543 14142582 8 108 1.5 3.0 2.2 2.5 149 chr2R 14142433 intergenic not near genes chr2R 14142508 intergenic not near genes chr2R 14142582 intergenic not near genes chr2R_8_14140001 chr2R_14140001 RAL-911 613 chr2R 14168353 14168383 chr2R 14168462 14168492 8 109 5.5 7.0 6.2 1.1 139 chr2R 14168353 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168422 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168492 intergenic CG18327 +,CG18324 +,CR44368 - chr2R_8_14165001 chr2R_14165001 RAL-911 614 chr2R 14285028 14285050 chr2R 14285145 14285167 9 117 4.0 1.5 2.8 2.4 139 chr2R 14285028 intron Ih + chr2R 14285098 intron Ih + chr2R 14285167 intron Ih + chr2R_9_14285001 chr2R_14285001 RAL-911 615 chr2R 14357535 14357577 chr2R 14357645 14357687 21 109 5.5 6.5 6.0 3.0 152 chr2R 14357535 intergenic CG8617 -,Arc1 - chr2R 14357611 intergenic Arc1 -,CG8617 - chr2R 14357687 intergenic Arc1 -,CG8617 - chr2R_21_14355001 chr2R_14355001 RAL-911 616 chr2R 14378979 14379005 chr2R 14379457 14379485 5 474 4.0 4.0 4.0 1.0 506 chr2R 14378979 intron Dh44-R1 + chr2R 14379232 intron Dh44-R1 + chr2R 14379485 intron Dh44-R1 + chr2R_5_14375001 chr2R_14375001 RAL-911 617 chr2R 14393863 14393890 chr2R 14393966 14393983 5 93 4.0 4.5 4.2 1.0 120 chr2R 14393863 intergenic not near genes chr2R 14393923 intergenic not near genes chr2R 14393983 intergenic not near genes chr2R_5_14390001 chr2R_14390001 RAL-911 618 chr2R 14394211 14394236 chr2R 14399020 14399029 Doc 6 4806 3.5 6.5 5.0 1.0 4818 chr2R 14394211 intergenic not near genes chr2R 14396620 intergenic not near genes chr2R 14399029 intergenic not near genes chr2R_6_14395001 chr2R_14395001 RAL-911 619 chr2R 14497378 14497419 chr2R 14498554 14498604 1360 21 1185 6.0 4.5 5.2 3.4 1226 chr2R 14497378 3` UTR Cpsf160 - chr2R 14497991 intron Cpsf160 - chr2R 14498604 3` UTR Cpsf160 - chr2R_21_14495001 chr2R_14495001 RAL-911 620 chr2R 14514472 14514495 chr2R 14514585 14514624 4 117 5.5 5.0 5.2 0.6 152 chr2R 14514472 intron,intron Cpr51A -,CG30197 + chr2R 14514548 intron,intron Cpr51A -,CG30197 + chr2R 14514624 intron,intron Cpr51A -,CG30197 + chr2R_4_14510001 chr2R_14510001 RAL-911 621 chr2R 14565541 14565587 chr2R 14565637 14565684 12 95 4.0 2.0 3.0 3.0 143 chr2R 14565541 intron ttv + chr2R 14565612 intron ttv + chr2R 14565684 intron ttv + chr2R_12_14565001 chr2R_14565001 RAL-911 622 chr2R 14738002 14738030 chr2R 14738111 14738141 7 109 2.5 5.0 3.8 1.5 139 chr2R 14738002 3` UTR CR43428 - chr2R 14738072 3` UTR CR43428 - chr2R 14738141 3` UTR CR43428 - chr2R_7_14735001 chr2R_14735001 RAL-911 623 chr2R 14794779 14794813 chr2R 14794871 14794915 6 99 3.5 3.5 3.5 1.3 136 chr2R 14794779 intron kn - chr2R 14794847 intron kn - chr2R 14794915 intron kn - chr2R_6_14790001 chr2R_14790001 RAL-911 624 chr2R 14811340 14811368 chr2R 14811429 14811464 8 94 5.0 5.0 5.0 1.3 124 chr2R 14811340 intergenic not near genes chr2R 14811402 intergenic not near genes chr2R 14811464 intergenic not near genes chr2R_8_14810001 chr2R_14810001 RAL-911 625 chr2R 14842374 14842392 chr2R 14842489 14842497 6 111 2.5 2.0 2.2 1.9 123 chr2R 14842374 intergenic NaPi-T - chr2R 14842436 intergenic NaPi-T - chr2R 14842497 intergenic NaPi-T - chr2R_6_14840001 chr2R_14840001 RAL-911 626 chr2R 14870761 14870782 chr2R 14870866 14870887 5 105 9.0 1.5 5.2 0.8 126 chr2R 14870761 intron Inr-a - chr2R 14870824 intron Inr-a - chr2R 14870887 intron Inr-a - chr2R_5_14870001 chr2R_14870001 RAL-911 627 chr2R 14911684 14911724 chr2R 14911827 14911867 9 143 3.5 1.0 2.2 2.8 183 chr2R 14911684 intron CG10249 - chr2R 14911776 intron CG10249 - chr2R 14911867 intron CG10249 - chr2R_9_14910001 chr2R_14910001 RAL-911 628 chr2R 14919057 14919175 chr2R 14919136 14919304 8 119 0.0 0.0 0.0 8.0 247 chr2R 14919057 intron CG10249 - chr2R 14919180 intron CG10249 - chr2R 14919304 intron CG10249 - chr2R_8_14915001 chr2R_14915001 RAL-911 629 chr2R 14922129 14922173 chr2R 14922224 14922231 4 85 3.0 3.5 3.2 1.0 102 chr2R 14922129 intron CG10249 - chr2R 14922180 intron CG10249 - chr2R 14922231 intron CG10249 - chr2R_4_14920001 chr2R_14920001 RAL-911 630 chr2R 14979759 14979791 chr2R 14979839 14979870 8 91 2.5 3.5 3.0 2.0 111 chr2R 14979759 3` UTR ckn + chr2R 14979814 3` UTR ckn + chr2R 14979870 3` UTR ckn + chr2R_8_14975001 chr2R_14975001 RAL-911 631 chr2R 15004719 15004744 chr2R 15005062 15005093 jockey 4 348 4.0 2.0 3.0 1.0 374 chr2R 15004719 intergenic not near genes chr2R 15004906 intergenic not near genes chr2R 15005093 intergenic not near genes chr2R_4_15000001 chr2R_15000001 RAL-911 632 chr2R 15004747 15004754 chr2R 15005059 15005103 jockey 5 341 4.0 2.0 3.0 1.2 356 chr2R 15004747 intergenic not near genes chr2R 15004925 intergenic not near genes chr2R 15005103 intergenic not near genes chr2R_5_15000001 chr2R_15000001 RAL-911 633 chr2R 15015453 15015472 chr2R 15022893 15022916 mdg1 8 7443 1.5 7.0 4.2 1.5 7463 chr2R 15015453 intron hbs + chr2R 15019184 intron hbs + chr2R 15022916 intron hbs + chr2R_8_15015001 chr2R_15015001 RAL-911 634 chr2R 15051070 15051110 chr2R 15051166 15051211 9 96 1.5 2.0 1.8 3.2 141 chr2R 15051070 intergenic not near genes chr2R 15051140 intergenic not near genes chr2R 15051211 intergenic not near genes chr2R_9_15050001 chr2R_15050001 RAL-911 635 chr2R 15133465 15133496 chr2R 15133563 15133587 6 96 7.5 2.5 5.0 1.0 122 chr2R 15133465 intron chn + chr2R 15133526 intron chn + chr2R 15133587 intron chn + chr2R_6_15130001 chr2R_15130001 RAL-911 636 chr2R 15204507 15204551 chr2R 15204715 15204756 10 205 3.0 3.0 3.0 2.5 249 chr2R 15204507 intergenic CG11807 + chr2R 15204632 intergenic CG11807 + chr2R 15204756 intergenic CG11807 + chr2R_10_15200001 chr2R_15200001 RAL-911 637 chr2R 15235050 15235072 chr2R 15235184 15235206 5 134 2.0 3.5 2.8 1.3 156 chr2R 15235050 intron Fs - chr2R 15235128 intron Fs - chr2R 15235206 intron Fs - chr2R_5_15235001 chr2R_15235001 RAL-911 638 chr2R 15258471 15258519 chr2R 15258568 15258616 15 95 2.0 3.5 2.8 3.9 145 chr2R 15258471 3` UTR scb + chr2R 15258544 intergenic scb +,ItgalphaPS4 + chr2R 15258616 intergenic scb +,ItgalphaPS4 + chr2R_15_15255001 chr2R_15255001 RAL-911 639 chr2R 15330194 15330238 chr2R 15330347 15330385 9 152 1.5 2.5 2.0 3.0 191 chr2R 15330194 intergenic CR44371 - chr2R 15330290 intergenic CR44371 - chr2R 15330385 intergenic CR44371 - chr2R_9_15330001 chr2R_15330001 RAL-911 640 chr2R 15606116 15606120 chr2R 15606213 15606216 4 97 7.5 2.5 5.0 0.7 100 chr2R 15606116 intergenic not near genes chr2R 15606166 intergenic not near genes chr2R 15606216 intergenic not near genes chr2R_4_15605001 chr2R_15605001 RAL-911 641 chr2R 15656011 15656066 chr2R 15656122 15656177 5 111 0.0 0.5 0.2 4.2 166 chr2R 15656011 intron CG42524 + chr2R 15656094 intron CG42524 + chr2R 15656177 intron CG42524 + chr2R_5_15655001 chr2R_15655001 RAL-911 642 chr2R 15697874 15697914 chr2R 15697975 15698015 14 98 1.5 0.0 0.8 7.8 141 chr2R 15697874 exon CG33462 + chr2R 15697944 3` UTR CG33462 + chr2R 15698015 intergenic CG33462 + chr2R_14_15695001 chr2R_15695001 RAL-911 643 chr2R 15720330 15720362 chr2R 15720428 15720433 5 93 2.0 2.0 2.0 1.7 103 chr2R 15720330 intergenic not near genes chr2R 15720382 intergenic not near genes chr2R 15720433 intergenic not near genes chr2R_5_15720001 chr2R_15720001 RAL-911 644 chr2R 15848319 15848343 chr2R 15848416 15848440 5 97 1.0 0.5 0.8 2.8 121 chr2R 15848319 intron tun + chr2R 15848380 intron tun + chr2R 15848440 intron tun + chr2R_5_15845001 chr2R_15845001 RAL-911 645 chr2R 15891799 15891829 chr2R 15891893 15891925 7 95 7.5 5.0 6.2 1.0 126 chr2R 15891799 intron sli - chr2R 15891862 intron sli - chr2R 15891925 intron sli - chr2R_7_15890001 chr2R_15890001 RAL-911 646 chr2R 16334656 16334701 chr2R 16334759 16334763 9 98 6.5 3.0 4.8 1.6 107 chr2R 16334656 intron Vha44 - chr2R 16334710 intron Vha44 - chr2R 16334763 intron Vha44 - chr2R_9_16330001 chr2R_16330001 RAL-911 647 chr2R 16352847 16352866 chr2R 16352950 16352969 8 102 2.5 4.5 3.5 1.8 122 chr2R 16352847 intergenic not near genes chr2R 16352908 intergenic not near genes chr2R 16352969 intergenic not near genes chr2R_8_16350001 chr2R_16350001 RAL-911 648 chr2R 16486852 16486882 chr2R 16486967 16486986 8 114 4.0 8.5 6.2 1.1 134 chr2R 16486852 exon CG33458 + chr2R 16486919 intron CG33458 + chr2R 16486986 intron CG33458 + chr2R_8_16485001 chr2R_16485001 RAL-911 649 chr2R 16489250 16489299 chr2R 16489354 16489403 10 101 3.0 2.5 2.8 2.6 153 chr2R 16489250 intergenic CG33459 + chr2R 16489326 intergenic CG33459 + chr2R 16489403 intergenic CG33459 + chr2R_10_16485001 chr2R_16485001 RAL-911 650 chr2R 16539620 16539632 chr2R 16544846 16544858 copia 4 5226 1.0 0.0 0.5 2.7 5238 chr2R 16539620 intergenic not near genes chr2R 16542239 intergenic not near genes chr2R 16544858 intergenic not near genes chr2R_4_16540001 chr2R_16540001 RAL-911 651 chr2R 16544847 16544868 chr2R 16544952 16544973 9 105 0.0 0.0 0.0 9.0 126 chr2R 16544847 intergenic not near genes chr2R 16544910 intergenic not near genes chr2R 16544973 intergenic not near genes chr2R_9_16540001 chr2R_16540001 RAL-911 652 chr2R 16571858 16571900 chr2R 16571973 16572015 16 115 3.0 4.0 3.5 3.6 157 chr2R 16571858 intergenic CG4927 + chr2R 16571936 intergenic CG4927 + chr2R 16572015 intergenic CG4927 + chr2R_16_16570001 chr2R_16570001 RAL-911 653 chr2R 16617062 16617074 chr2R 16617161 16617173 5 97 0.0 2.0 1.0 2.5 111 chr2R 16617062 intron CG5065 + chr2R 16617118 intron CG5065 + chr2R 16617173 intron CG5065 + chr2R_5_16615001 chr2R_16615001 RAL-911 654 chr2R 16665100 16665149 chr2R 16665204 16665253 15 103 4.0 4.5 4.2 2.9 153 chr2R 16665100 intron Picot - chr2R 16665176 intron Picot - chr2R 16665253 intron Picot - chr2R_15_16665001 chr2R_16665001 RAL-911 655 chr2R 16708993 16709022 chr2R 16709094 16709132 8 107 1.5 3.5 2.5 2.3 139 chr2R 16708993 intron CG30463 - chr2R 16709062 intron CG30463 - chr2R 16709132 intron CG30463 - chr2R_8_16705001 chr2R_16705001 RAL-911 656 chr2R 16714536 16714571 chr2R 16714635 16714670 5 97 3.0 3.5 3.2 1.2 134 chr2R 16714536 intron CG30463 - chr2R 16714603 intron CG30463 - chr2R 16714670 intron CG30463 - chr2R_5_16710001 chr2R_16710001 RAL-911 657 chr2R 16720972 16721017 chr2R 16721069 16721114 10 95 3.5 4.0 3.8 2.1 142 chr2R 16720972 intron CG30463 - chr2R 16721043 intron CG30463 - chr2R 16721114 intron CG30463 - chr2R_10_16720001 chr2R_16720001 RAL-911 658 chr2R 16775638 16775675 chr2R 16775925 16775958 6 286 0.0 3.0 1.5 2.4 320 chr2R 16775638 3` UTR Arp53D + chr2R 16775798 intergenic Arp53D + chr2R 16775958 intergenic Arp53D + chr2R_6_16775001 chr2R_16775001 RAL-911 659 chr2R 16860024 16860067 chr2R 16860899 16860941 9 878 25.5 23.0 24.2 0.4 917 chr2R 16860024 3` UTR Dek + chr2R 16860482 3` UTR Dek + chr2R 16860941 3` UTR Dek + chr2R_9_16860001 chr2R_16860001 RAL-911 660 chr2R 16930609 16930626 chr2R 16930707 16930724 6 98 0.0 6.5 3.2 1.4 115 chr2R 16930609 intron Pkc53E + chr2R 16930666 intron Pkc53E + chr2R 16930724 intron Pkc53E + chr2R_6_16930001 chr2R_16930001 RAL-911 661 chr2R 16962713 16962725 chr2R 16963086 16963097 4 373 2.0 4.5 3.2 1.0 384 chr2R 16962713 intergenic not near genes chr2R 16962905 intergenic not near genes chr2R 16963097 intergenic not near genes chr2R_4_16960001 chr2R_16960001 RAL-911 662 chr2R 16975183 16975225 chr2R 16975280 16975322 6 96 3.0 3.0 3.0 1.5 139 chr2R 16975183 intron Cbp53E + chr2R 16975252 intron Cbp53E + chr2R 16975322 intron Cbp53E + chr2R_6_16975001 chr2R_16975001 RAL-911 663 chr2R 17079034 17079088 chr2R 17079136 17079189 10 102 1.5 2.5 2.0 3.3 155 chr2R 17079034 intron CG30460 - chr2R 17079112 intron CG30460 - chr2R 17079189 intron CG30460 - chr2R_10_17075001 chr2R_17075001 RAL-911 664 chr2R 17147233 17147242 chr2R 17152277 17152293 jockey 5 5050 6.5 5.0 5.8 0.7 5060 chr2R 17147233 intergenic not near genes chr2R 17149763 intergenic not near genes chr2R 17152293 intergenic not near genes chr2R_5_17145001 chr2R_17145001 RAL-911 665 chr2R 17147249 17147263 chr2R 17152271 17152313 jockey 8 5045 4.0 5.0 4.5 1.5 5064 chr2R 17147249 intergenic not near genes chr2R 17149781 intergenic not near genes chr2R 17152313 intergenic not near genes chr2R_8_17145001 chr2R_17145001 RAL-911 666 chr2R 17176356 17176372 chr2R 17182566 17182580 diver 6 6207 0.0 5.5 2.8 1.6 6224 chr2R 17176356 intergenic not near genes chr2R 17179468 intergenic not near genes chr2R 17182580 intergenic not near genes chr2R_6_17175001 chr2R_17175001 RAL-911 667 chr2R 17176377 17176388 chr2R 17182542 17182598 diver 7 6203 0.0 3.5 1.8 2.5 6221 chr2R 17176377 intergenic not near genes chr2R 17179488 intergenic not near genes chr2R 17182598 intergenic not near genes chr2R_7_17175001 chr2R_17175001 RAL-911 668 chr2R 17183429 17183460 chr2R 17183527 17183573 12 100 2.5 0.0 1.2 5.5 144 chr2R 17183429 intergenic not near genes chr2R 17183501 intergenic not near genes chr2R 17183573 intergenic not near genes chr2R_12_17180001 chr2R_17180001 RAL-911 669 chr2R 17201078 17201096 chr2R 17201182 17201200 6 104 5.5 0.0 2.8 1.6 122 chr2R 17201078 intergenic not near genes chr2R 17201139 intergenic not near genes chr2R 17201200 intergenic not near genes chr2R_6_17200001 chr2R_17200001 RAL-911 670 chr2R 17233277 17233303 chr2R 17233397 17233422 5 117 3.5 3.0 3.2 1.2 145 chr2R 17233277 intron mbl + chr2R 17233350 intron mbl + chr2R 17233422 intron mbl + chr2R_5_17230001 chr2R_17230001 RAL-911 671 chr2R 17381574 17381600 chr2R 17381680 17381697 4 105 1.5 1.0 1.2 1.8 123 chr2R 17381574 intergenic not near genes chr2R 17381636 intergenic not near genes chr2R 17381697 intergenic not near genes chr2R_4_17380001 chr2R_17380001 RAL-911 672 chr2R 17397792 17397809 chr2R 17397903 17397920 7 111 7.5 4.0 5.8 1.0 128 chr2R 17397792 intron Sip1 + chr2R 17397856 intron Sip1 + chr2R 17397920 intron Sip1 + chr2R_7_17395001 chr2R_17395001 RAL-911 673 chr2R 17443763 17443802 chr2R 17443859 17443897 14 96 3.0 8.5 5.8 2.1 134 chr2R 17443763 intron EDTP - chr2R 17443830 intron EDTP - chr2R 17443897 intron EDTP - chr2R_14_17440001 chr2R_17440001 RAL-911 674 chr2R 17470315 17470354 chr2R 17470415 17470454 13 98 0.0 3.0 1.5 5.2 139 chr2R 17470315 intron qkr54B + chr2R 17470384 intron qkr54B + chr2R 17470454 intron qkr54B + chr2R_13_17470001 chr2R_17470001 RAL-911 675 chr2R 17485896 17485951 chr2R 17490678 17490731 F-element 6 4774 3.5 1.0 2.2 1.9 4835 chr2R 17485896 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488314 intron NT5E-2 + chr2R 17490731 intron NT5E-2 + chr2R_6_17485001 chr2R_17485001 RAL-911 676 chr2R 17708377 17708423 chr2R 17708478 17708519 15 100 3.5 3.5 3.5 3.3 142 chr2R 17708377 intron CG6424 - chr2R 17708448 intron CG6424 - chr2R 17708519 intron CG6424 - chr2R_15_17705001 chr2R_17705001 RAL-911 677 chr2R 17709963 17710114 chr2R 17710074 17710212 23 100 0.0 0.0 0.0 23.0 249 chr2R 17709963 intron CG6424 - chr2R 17710088 intron CG6424 - chr2R 17710212 intron CG6424 - chr2R_23_17710001 chr2R_17710001 RAL-911 678 chr2R 17720901 17720932 chr2R 17721004 17721035 10 102 6.0 3.5 4.8 1.7 134 chr2R 17720901 intergenic not near genes chr2R 17720968 intergenic not near genes chr2R 17721035 intergenic not near genes chr2R_10_17720001 chr2R_17720001 RAL-911 679 chr2R 17782343 17782394 chr2R 17783566 17783617 pogo 16 1221 3.5 4.0 3.8 3.3 1274 chr2R 17782343 intergenic CG33981 -,fab1 - chr2R 17782980 intergenic not near genes chr2R 17783617 intergenic mir-31a - chr2R_16_17780001 chr2R_17780001 RAL-911 680 chr2R 17784012 17784056 chr2R 17784271 17784300 pogo 10 258 2.0 2.0 2.0 3.3 288 chr2R 17784012 intergenic mir-31a - chr2R 17784156 intergenic mir-31a - chr2R 17784300 intergenic mir-31a - chr2R_10_17780001 chr2R_17780001 RAL-911 681 chr2R 17794767 17794783 chr2R 17794866 17794882 6 99 0.0 3.0 1.5 2.4 115 chr2R 17794767 intron Dhit + chr2R 17794824 intron Dhit + chr2R 17794882 intron Dhit + chr2R_6_17790001 chr2R_17790001 RAL-911 682 chr2R 17960154 17960170 chr2R 17960256 17960271 8 103 0.5 3.0 1.8 2.9 117 chr2R 17960154 intergenic not near genes chr2R 17960212 intergenic not near genes chr2R 17960271 intergenic not near genes chr2R_8_17960001 chr2R_17960001 RAL-911 683 chr2R 17984654 17984670 chr2R 17984755 17984772 4 101 1.5 0.5 1.0 2.0 118 chr2R 17984654 intron dpr13 - chr2R 17984713 intron dpr13 - chr2R 17984772 intron dpr13 - chr2R_4_17980001 chr2R_17980001 RAL-911 684 chr2R 17997140 17997171 chr2R 17997241 17997273 4 97 4.5 3.5 4.0 0.8 133 chr2R 17997140 intron dpr13 - chr2R 17997206 intron dpr13 - chr2R 17997273 intron dpr13 - chr2R_4_17995001 chr2R_17995001 RAL-911 685 chr2R 17997173 17997193 chr2R 17997238 17997294 9 90 1.5 3.5 2.5 2.6 121 chr2R 17997173 intron dpr13 - chr2R 17997234 intron dpr13 - chr2R 17997294 intron dpr13 - chr2R_9_17995001 chr2R_17995001 RAL-911 686 chr2R 18045656 18045703 chr2R 18046028 18046075 jockey 14 372 4.5 7.0 5.8 2.1 419 chr2R 18045656 intergenic not near genes chr2R 18045866 intergenic not near genes chr2R 18046075 intergenic CG5767 - chr2R_14_18045001 chr2R_18045001 RAL-911 687 chr2R 18111664 18111711 chr2R 18115552 18115598 F-element 11 3888 2.5 0.5 1.5 4.4 3934 chr2R 18111664 intergenic not near genes chr2R 18113631 intergenic not near genes chr2R 18115598 intergenic not near genes chr2R_11_18110001 chr2R_18110001 RAL-911 688 chr2R 18308267 18308317 chr2R 18308393 18308443 13 124 2.5 2.5 2.5 3.7 176 chr2R 18308267 intron sbb - chr2R 18308355 intron sbb - chr2R 18308443 intron sbb - chr2R_13_18305001 chr2R_18305001 RAL-911 689 chr2R 18358378 18358413 chr2R 18372609 18372645 roo 15 14231 5.0 4.5 4.8 2.6 14267 chr2R 18358378 intergenic not near genes chr2R 18365512 intergenic not near genes chr2R 18372645 intergenic not near genes chr2R_15_18365001 chr2R_18365001 RAL-911 690 chr2R 18402485 18402533 chr2R 18402593 18402625 5 101 1.5 1.5 1.5 2.0 140 chr2R 18402485 intergenic not near genes chr2R 18402555 intergenic not near genes chr2R 18402625 intergenic not near genes chr2R_5_18400001 chr2R_18400001 RAL-911 691 chr2R 18405728 18405785 chr2R 18405829 18405885 10 100 2.5 0.5 1.5 4.0 157 chr2R 18405728 intergenic GstE6 +,GstE5 + chr2R 18405806 intergenic GstE6 +,GstE5 + chr2R 18405885 intergenic GstE6 + chr2R_10_18405001 chr2R_18405001 RAL-911 692 chr2R 18528185 18528222 chr2R 18528279 18528283 8 79 5.0 0.5 2.8 2.1 98 chr2R 18528185 intron CG10924 + chr2R 18528234 intron CG10924 + chr2R 18528283 intron CG10924 + chr2R_8_18525001 chr2R_18525001 RAL-911 693 chr2R 18575811 18575829 chr2R 18581984 18582032 3S18 4 6198 1.5 3.0 2.2 1.2 6221 chr2R 18575811 intron GEFmeso - chr2R 18578922 intron GEFmeso - chr2R 18582032 intron GEFmeso - chr2R_4_18575001 chr2R_18575001 RAL-911 694 chr2R 18590865 18590901 chr2R 18600037 18600047 roo 5 9160 3.5 0.5 2.0 1.7 9182 chr2R 18590865 intron GEFmeso - chr2R 18595456 intron GEFmeso - chr2R 18600047 intron GEFmeso - chr2R_5_18595001 chr2R_18595001 RAL-911 695 chr2R 18646398 18646429 chr2R 18646563 18646574 7 161 5.0 3.5 4.2 1.3 176 chr2R 18646398 intron SP2637 - chr2R 18646486 intron SP2637 - chr2R 18646574 intron SP2637 - chr2R_7_18645001 chr2R_18645001 RAL-911 696 chr2R 18692881 18692920 chr2R 18692988 18693006 10 100 3.0 2.5 2.8 2.6 125 chr2R 18692881 intron Sik3 + chr2R 18692944 intron Sik3 + chr2R 18693006 intron Sik3 + chr2R_10_18690001 chr2R_18690001 RAL-911 697 chr2R 18745059 18745101 chr2R 18745183 18745225 7 123 3.5 3.0 3.2 1.7 166 chr2R 18745059 intron Hs3st-A + chr2R 18745142 intron Hs3st-A + chr2R 18745225 intron Hs3st-A + chr2R_7_18745001 chr2R_18745001 RAL-911 698 chr2R 18806700 18806713 chr2R 18806796 18806798 4 93 3.0 3.5 3.2 1.0 98 chr2R 18806700 5` UTR CR44468 + chr2R 18806749 5` UTR CR44468 + chr2R 18806798 5` UTR CR44468 + chr2R_4_18805001 chr2R_18805001 RAL-911 699 chr2R 18862295 18862406 chr2R 18862402 18862511 11 112 0.0 0.0 0.0 11.0 216 chr2R 18862295 intergenic Jheh3 - chr2R 18862403 intergenic Jheh3 -,CG43069 + chr2R 18862511 intergenic CG43069 +,Jheh3 - chr2R_11_18860001 chr2R_18860001 RAL-911 700 chr2R 18984452 18984493 chr2R 18984728 18984772 8 275 1.5 3.0 2.2 2.5 320 chr2R 18984452 intergenic not near genes chr2R 18984612 intergenic not near genes chr2R 18984772 intergenic not near genes chr2R_8_18980001 chr2R_18980001 RAL-911 701 chr2R 18988998 18989045 chr2R 18989096 18989143 16 97 6.0 5.5 5.8 2.4 145 chr2R 18988998 intron tn + chr2R 18989070 intron tn + chr2R 18989143 intron tn + chr2R_16_18985001 chr2R_18985001 RAL-911 702 chr2R 19026030 19026051 chr2R 19026150 19026161 5 118 8.0 0.0 4.0 1.0 131 chr2R 19026030 intron 5-HT1B - chr2R 19026096 intron 5-HT1B - chr2R 19026161 intron 5-HT1B - chr2R_5_19025001 chr2R_19025001 RAL-911 703 chr2R 19067719 19067751 chr2R 19067815 19067847 12 96 4.5 2.0 3.2 2.9 128 chr2R 19067719 intron 5-HT1A + chr2R 19067783 intron 5-HT1A + chr2R 19067847 intron 5-HT1A + chr2R_12_19065001 chr2R_19065001 RAL-911 704 chr2R 19200454 19200495 chr2R 19200556 19200597 4 102 3.5 1.0 2.2 1.2 143 chr2R 19200454 intron hppy + chr2R 19200526 intron hppy + chr2R 19200597 intron hppy + chr2R_4_19200001 chr2R_19200001 RAL-911 705 chr2R 19536465 19536498 chr2R 19536560 19536600 11 101 3.0 3.0 3.0 2.8 135 chr2R 19536465 intron sm - chr2R 19536532 intron sm - chr2R 19536600 intron sm - chr2R_11_19535001 chr2R_19535001 RAL-911 706 chr2R 19641764 19641800 chr2R 19641889 19641917 8 122 1.5 4.5 3.0 2.0 153 chr2R 19641764 intergenic not near genes chr2R 19641840 intergenic not near genes chr2R 19641917 intergenic not near genes chr2R_8_19640001 chr2R_19640001 RAL-911 707 chr2R 19669847 19669890 chr2R 19669953 19669994 7 100 1.0 3.5 2.2 2.2 147 chr2R 19669847 intergenic hrg - chr2R 19669920 intergenic hrg - chr2R 19669994 intergenic hrg - chr2R_7_19665001 chr2R_19665001 RAL-911 708 chr2R 19714713 19714736 chr2R 19714783 19714832 8 90 0.5 3.5 2.0 2.7 119 chr2R 19714713 3` UTR CG8517 + chr2R 19714772 3` UTR CG8517 + chr2R 19714832 3` UTR CG8517 + chr2R_8_19710001 chr2R_19710001 RAL-911 709 chr2R 19776579 19776603 chr2R 19779918 19779946 jockey 4 3336 4.5 2.5 3.5 0.9 3367 chr2R 19776579 intergenic not near genes chr2R 19778262 intergenic not near genes chr2R 19779946 intergenic not near genes chr2R_4_19775001 chr2R_19775001 RAL-911 710 chr2R 19807650 19807693 chr2R 19807758 19807791 9 104 1.5 4.0 2.8 2.4 141 chr2R 19807650 intergenic not near genes chr2R 19807720 intergenic not near genes chr2R 19807791 intergenic not near genes chr2R_9_19805001 chr2R_19805001 RAL-911 711 chr2R 19914828 19914876 chr2R 19922260 19922308 mdg1 9 7432 3.0 3.5 3.2 2.1 7480 chr2R 19914828 intergenic not near genes chr2R 19918568 intergenic not near genes chr2R 19922308 intergenic not near genes chr2R_9_19915001 chr2R_19915001 RAL-911 712 chr2R 19926007 19926038 chr2R 19926110 19926141 9 97 4.0 2.5 3.2 2.1 134 chr2R 19926007 intergenic CR44626 - chr2R 19926074 intergenic CR44626 - chr2R 19926141 intergenic CR44626 - chr2R_9_19925001 chr2R_19925001 RAL-911 713 chr2R 20008163 20008204 chr2R 20008272 20008301 12 107 2.5 0.5 1.5 4.8 138 chr2R 20008163 intergenic not near genes chr2R 20008232 intergenic not near genes chr2R 20008301 intergenic not near genes chr2R_12_20005001 chr2R_20005001 RAL-911 714 chr2R 20030994 20031017 chr2R 20031087 20031088 6 93 2.0 3.0 2.5 1.7 94 chr2R 20030994 intergenic not near genes chr2R 20031041 intergenic not near genes chr2R 20031088 intergenic not near genes chr2R_6_20030001 chr2R_20030001 RAL-911 715 chr2R 20031888 20031935 chr2R 20032004 20032049 6 110 1.5 3.0 2.2 1.9 161 chr2R 20031888 intergenic not near genes chr2R 20031968 intergenic not near genes chr2R 20032049 intergenic not near genes chr2R_6_20030001 chr2R_20030001 RAL-911 716 chr2R 20069226 20069270 chr2R 20071876 20071920 opus 8 2647 5.0 3.5 4.2 1.5 2694 chr2R 20069226 intergenic not near genes chr2R 20070573 intergenic not near genes chr2R 20071920 intergenic not near genes chr2R_8_20070001 chr2R_20070001 RAL-911 717 chr2R 20080601 20080617 chr2R 20080698 20080714 7 96 0.0 7.0 3.5 1.6 113 chr2R 20080601 intergenic not near genes chr2R 20080658 intergenic not near genes chr2R 20080714 intergenic not near genes chr2R_7_20080001 chr2R_20080001 RAL-911 718 chr2R 20106133 20106162 chr2R 20106253 20106271 8 116 3.0 6.0 4.5 1.5 138 chr2R 20106133 intergenic not near genes chr2R 20106202 intergenic not near genes chr2R 20106271 intergenic not near genes chr2R_8_20105001 chr2R_20105001 RAL-911 719 chr2R 20174623 20174671 chr2R 20174719 20174754 6 94 0.5 2.0 1.2 2.7 131 chr2R 20174623 intergenic not near genes chr2R 20174688 intergenic not near genes chr2R 20174754 intergenic not near genes chr2R_6_20170001 chr2R_20170001 RAL-911 720 chr2R 20441030 20441069 chr2R 20441137 20441171 6 107 3.5 4.5 4.0 1.2 141 chr2R 20441030 intron CG12484 + chr2R 20441100 intron CG12484 + chr2R 20441171 intron CG12484 + chr2R_6_20440001 chr2R_20440001 RAL-911 721 chr2R 20457992 20458020 chr2R 20458081 20458112 6 98 1.5 2.0 1.8 2.1 120 chr2R 20457992 intron CG12484 + chr2R 20458052 intron CG12484 + chr2R 20458112 intron CG12484 + chr2R_6_20455001 chr2R_20455001 RAL-911 722 chr2R 20541972 20542008 chr2R 20542070 20542106 12 98 5.5 3.5 4.5 2.2 134 chr2R 20541972 intergenic not near genes chr2R 20542039 intergenic not near genes chr2R 20542106 intergenic not near genes chr2R_12_20540001 chr2R_20540001 RAL-911 723 chr2R 20555337 20555347 chr2R 20555421 20555457 6 103 0.0 0.0 0.0 6.0 120 chr2R 20555337 intergenic not near genes chr2R 20555397 intergenic not near genes chr2R 20555457 intergenic not near genes chr2R_6_20555001 chr2R_20555001 RAL-911 724 chr2R 20601718 20601742 chr2R 20601823 20601842 5 103 2.0 1.5 1.8 1.8 124 chr2R 20601718 intron bl + chr2R 20601780 intron bl + chr2R 20601842 intron bl + chr2R_5_20600001 chr2R_20600001 RAL-911 725 chr2R 20739430 20739470 chr2R 20744209 20744248 F-element 4 4777 3.0 0.5 1.8 1.4 4818 chr2R 20739430 intron dpr + chr2R 20741839 intron dpr + chr2R 20744248 intron dpr + chr2R_4_20740001 chr2R_20740001 RAL-911 726 chr2R 20783298 20783332 chr2R 20788088 20788124 F-element 11 4790 3.5 2.0 2.8 2.9 4826 chr2R 20783298 intergenic not near genes chr2R 20785711 intergenic not near genes chr2R 20788124 intergenic CG43666 - chr2R_11_20785001 chr2R_20785001 RAL-911 727 chr2R 20942353 20942370 chr2R 20942456 20942473 16 102 1.5 0.0 0.8 8.9 120 chr2R 20942353 intergenic not near genes chr2R 20942413 intergenic not near genes chr2R 20942473 intergenic not near genes chr2R_16_20940001 chr2R_20940001 RAL-911 728 chr2R 20967013 20967054 chr2R 20967110 20967150 6 94 4.0 0.0 2.0 2.0 137 chr2R 20967013 intergenic not near genes chr2R 20967082 intergenic not near genes chr2R 20967150 intergenic not near genes chr2R_6_20965001 chr2R_20965001 RAL-911 729 chr2R 21060628 21060673 chr2R 21060730 21060772 12 100 2.5 2.5 2.5 3.4 144 chr2R 21060628 intergenic CG15653 -,mRpL54 + chr2R 21060700 intergenic mRpL54 +,CG15653 - chr2R 21060772 intergenic mRpL54 +,CG15653 - chr2R_12_21060001 chr2R_21060001 RAL-911 730 chr2R 21079954 21079990 chr2R 21080057 21080093 14 101 8.5 3.5 6.0 2.0 139 chr2R 21079954 intron Treh + chr2R 21080024 intron Treh + chr2R 21080093 intron Treh + chr2R_14_21080001 chr2R_21080001 RAL-911 731 chr2R 21136879 21136918 chr2R 21136983 21137022 11 103 2.0 0.0 1.0 5.5 143 chr2R 21136879 intron Magi - chr2R 21136950 intron Magi - chr2R 21137022 intron Magi - chr2R_11_21135001 chr2R_21135001 RAL-911 732 chr2R 21151110 21151143 chr2R 21153748 21153795 opus 6 2644 5.0 1.5 3.2 1.4 2685 chr2R 21151110 intron CG30389 - chr2R 21152452 intron CG30389 - chr2R 21153795 intron CG30389 - chr2R_6_21150001 chr2R_21150001 RAL-911 733 chr2R 21363116 21363131 chr2R 21363234 21363249 4 118 0.5 0.0 0.2 3.3 133 chr2R 21363116 intron cv-2 - chr2R 21363182 intron cv-2 - chr2R 21363249 intron cv-2 - chr2R_4_21360001 chr2R_21360001 RAL-911 734 chr2R 21370503 21370538 chr2R 21370630 21370665 10 126 3.5 5.5 4.5 1.8 162 chr2R 21370503 intron cv-2 - chr2R 21370584 intron cv-2 - chr2R 21370665 intron cv-2 - chr2R_10_21370001 chr2R_21370001 RAL-911 735 chr2R 21381921 21381935 chr2R 21382028 21382042 5 107 6.5 0.5 3.5 1.1 121 chr2R 21381921 intergenic not near genes chr2R 21381982 intergenic not near genes chr2R 21382042 intergenic not near genes chr2R_5_21380001 chr2R_21380001 RAL-911 736 chr2R 21417260 21417269 chr2R 21417381 21417389 5 121 4.0 0.5 2.2 1.6 129 chr2R 21417260 intron Sdc - chr2R 21417324 intron Sdc - chr2R 21417389 intron Sdc - chr2R_5_21415001 chr2R_21415001 RAL-911 737 chr2R 21418513 21418566 chr2R 21418610 21418649 13 90 0.0 0.5 0.2 10.8 136 chr2R 21418513 intron Sdc - chr2R 21418581 intron Sdc - chr2R 21418649 intron Sdc - chr2R_13_21415001 chr2R_21415001 RAL-911 738 chr2R 21461441 21461484 chr2R 21461567 21461596 16 123 4.0 1.0 2.5 4.6 155 chr2R 21461441 intron Sdc - chr2R 21461518 intron Sdc - chr2R 21461596 intron Sdc - chr2R_16_21460001 chr2R_21460001 RAL-911 739 chr2R 21540678 21540697 chr2R 21540906 21540935 12 237 0.5 2.5 1.5 4.8 257 chr2R 21540678 intron Egfr + chr2R 21540806 intron Egfr + chr2R 21540935 intron Egfr + chr2R_12_21540001 chr2R_21540001 RAL-911 740 chr2R 21578742 21578760 chr2R 21578847 21578864 8 104 0.0 7.0 3.5 1.8 122 chr2R 21578742 intergenic not near genes chr2R 21578803 intergenic not near genes chr2R 21578864 intergenic not near genes chr2R_8_21575001 chr2R_21575001 RAL-911 741 chr2R 21710922 21710977 chr2R 21711024 21711079 15 101 3.0 2.0 2.5 4.3 157 chr2R 21710922 intron,intron HmgD +,CG30403 - chr2R 21711000 intron,intron HmgD +,CG30403 - chr2R 21711079 intron,intron HmgD +,CG30403 - chr2R_15_21710001 chr2R_21710001 RAL-911 742 chr2R 21732153 21732166 chr2R 21732258 21732271 5 105 0.0 1.5 0.8 2.8 118 chr2R 21732153 intergenic not near genes chr2R 21732212 intergenic not near genes chr2R 21732271 intergenic not near genes chr2R_5_21730001 chr2R_21730001 RAL-911 743 chr2R 21809502 21809513 chr2R 21817762 21817773 roo 6 8260 2.0 3.5 2.8 1.6 8271 chr2R 21809502 intergenic not near genes chr2R 21813638 intergenic not near genes chr2R 21817773 intergenic not near genes chr2R_6_21810001 chr2R_21810001 RAL-911 744 chr2R 21878703 21878752 chr2R 21878800 21878850 10 96 0.5 0.0 0.2 8.3 147 chr2R 21878703 intron Fili + chr2R 21878776 intron Fili + chr2R 21878850 intron Fili + chr2R_10_21875001 chr2R_21875001 RAL-911 745 chr2R 21906250 21906299 chr2R 21906371 21906420 9 120 6.0 4.5 5.2 1.5 170 chr2R 21906250 intron Fili + chr2R 21906335 intron Fili + chr2R 21906420 intron Fili + chr2R_9_21905001 chr2R_21905001 RAL-911 746 chr2R 21919875 21919899 chr2R 21919964 21919990 7 96 1.5 1.5 1.5 2.8 115 chr2R 21919875 intron Fili + chr2R 21919932 intron Fili + chr2R 21919990 intron Fili + chr2R_7_21915001 chr2R_21915001 RAL-911 747 chr2R 21961698 21961731 chr2R 21961889 21961922 10 190 4.0 3.5 3.8 2.1 224 chr2R 21961698 intergenic not near genes chr2R 21961810 intergenic not near genes chr2R 21961922 intergenic not near genes chr2R_10_21960001 chr2R_21960001 RAL-911 748 chr2R 21967389 21967406 chr2R 21967468 21967503 6 91 3.0 8.5 5.8 0.9 114 chr2R 21967389 intron ppk9 + chr2R 21967446 intron ppk9 + chr2R 21967503 intron ppk9 + chr2R_6_21965001 chr2R_21965001 RAL-911 749 chr2R 21993369 21993400 chr2R 21993480 21993511 9 111 1.5 6.0 3.8 1.9 142 chr2R 21993369 intron CG34370 - chr2R 21993440 intron CG34370 - chr2R 21993511 intron CG34370 - chr2R_9_21990001 chr2R_21990001 RAL-911 750 chr2R 22004292 22004316 chr2R 22004405 22004430 4 113 3.0 2.5 2.8 1.1 138 chr2R 22004292 intron CG34370 - chr2R 22004361 intron CG34370 - chr2R 22004430 intron CG34370 - chr2R_4_22000001 chr2R_22000001 RAL-911 751 chr2R 22029506 22029529 chr2R 22029604 22029627 8 98 3.0 0.0 1.5 3.2 121 chr2R 22029506 intron CG34370 - chr2R 22029566 intron CG34370 - chr2R 22029627 intron CG34370 - chr2R_8_22025001 chr2R_22025001 RAL-911 752 chr2R 22037754 22037801 chr2R 22037856 22037903 6 97 3.0 0.0 1.5 2.4 149 chr2R 22037754 intron CG34370 - chr2R 22037828 intron CG34370 - chr2R 22037903 intron CG34370 - chr2R_6_22035001 chr2R_22035001 RAL-911 753 chr2R 22099855 22099895 chr2R 22099956 22099993 11 101 0.5 4.0 2.2 3.4 138 chr2R 22099855 intergenic CG11073 - chr2R 22099924 intergenic CG11073 - chr2R 22099993 intergenic CG11073 - chr2R_11_22095001 chr2R_22095001 RAL-911 754 chr2R 22232498 22232510 chr2R 22232750 22232782 4 264 2.5 4.5 3.5 0.9 284 chr2R 22232498 intergenic not near genes chr2R 22232640 intergenic not near genes chr2R 22232782 intergenic not near genes chr2R_4_22230001 chr2R_22230001 RAL-911 755 chr2R 22290060 22290098 chr2R 22290164 22290180 4 98 5.0 0.5 2.8 1.1 120 chr2R 22290060 intergenic not near genes chr2R 22290120 intergenic not near genes chr2R 22290180 intergenic not near genes chr2R_4_22290001 chr2R_22290001 RAL-911 756 chr2R 22360366 22360391 chr2R 22360818 22360828 jockey 4 449 3.5 2.5 3.0 1.0 462 chr2R 22360366 intron Liprin-gamma - chr2R 22360597 intron Liprin-gamma - chr2R 22360828 intron Liprin-gamma - chr2R_4_22360001 chr2R_22360001 RAL-911 757 chr2R 22363683 22363713 chr2R 22363769 22363809 6 92 1.5 4.5 3.0 1.5 126 chr2R 22363683 intron Liprin-gamma - chr2R 22363746 intron Liprin-gamma - chr2R 22363809 intron Liprin-gamma - chr2R_6_22360001 chr2R_22360001 RAL-911 758 chr2R 22371036 22371075 chr2R 22371435 22371447 7 387 2.0 0.0 1.0 3.5 411 chr2R 22371036 intron Liprin-gamma - chr2R 22371242 intron Liprin-gamma - chr2R 22371447 intron Liprin-gamma - chr2R_7_22370001 chr2R_22370001 RAL-911 759 chr2R 22465300 22465345 chr2R 22465519 22465564 BS 16 217 3.0 5.0 4.0 3.2 264 chr2R 22465300 intron CG10384 + chr2R 22465432 intron CG10384 + chr2R 22465564 intron CG10384 + chr2R_16_22465001 chr2R_22465001 RAL-911 760 chr2R 22477894 22477943 chr2R 22478067 22478116 9 173 3.0 0.5 1.8 3.2 222 chr2R 22477894 intergenic CG4752 + chr2R 22478005 intergenic CG4752 + chr2R 22478116 intergenic CG4752 + chr2R_9_22475001 chr2R_22475001 RAL-911 761 chr2R 22503867 22503880 chr2R 22503978 22503983 5 112 0.0 2.5 1.2 2.3 116 chr2R 22503867 intron px - chr2R 22503925 intron px - chr2R 22503983 intron px - chr2R_5_22500001 chr2R_22500001 RAL-911 762 chr2R 22545601 22545649 chr2R 22545700 22545748 10 94 3.5 4.0 3.8 2.1 147 chr2R 22545601 intron px - chr2R 22545674 intron px - chr2R 22545748 intron px - chr2R_10_22545001 chr2R_22545001 RAL-911 763 chr2R 22575684 22575691 chr2R 22575746 22575786 4 80 0.0 3.0 1.5 1.6 102 chr2R 22575684 intron dnr1 - chr2R 22575735 intron dnr1 - chr2R 22575786 intron dnr1 - chr2R_4_22575001 chr2R_22575001 RAL-911 764 chr2R 22580419 22580444 chr2R 22586583 22586608 diver 4 6164 5.5 5.5 5.5 0.6 6189 chr2R 22580419 intron dnr1 - chr2R 22583514 intron dnr1 - chr2R 22586608 intron dnr1 - chr2R_4_22580001 chr2R_22580001 RAL-911 765 chr2R 22626923 22626963 chr2R 22627020 22627060 13 97 6.5 3.0 4.8 2.2 137 chr2R 22626923 intron CG33143 + chr2R 22626992 intron CG33143 + chr2R 22627060 intron CG33143 + chr2R_13_22625001 chr2R_22625001 RAL-911 766 chr2R 22774949 22774990 chr2R 22775386 22775429 jockey 14 435 5.0 4.5 4.8 2.4 480 chr2R 22774949 intron CG42260 - chr2R 22775189 intron CG42260 - chr2R 22775429 intron CG42260 - chr2R_14_22775001 chr2R_22775001 RAL-911 767 chr2R 22785710 22785760 chr2R 22785808 22785858 11 96 2.5 1.5 2.0 3.7 148 chr2R 22785710 intron CG42260 - chr2R 22785784 intron CG42260 - chr2R 22785858 intron CG42260 - chr2R_11_22785001 chr2R_22785001 RAL-911 768 chr2R 22839475 22839511 chr2R 22839574 22839579 11 89 4.0 0.0 2.0 3.7 104 chr2R 22839475 intergenic CG9825 + chr2R 22839527 intergenic CG9825 + chr2R 22839579 intergenic CG9825 + chr2R_11_22835001 chr2R_22835001 RAL-911 769 chr2R 22873611 22873619 chr2R 22873707 22873715 4 96 3.5 0.0 1.8 1.4 104 chr2R 22873611 exon CG13532 + chr2R 22873663 intron CG13532 + chr2R 22873715 intron CG13532 + chr2R_4_22870001 chr2R_22870001 RAL-911 770 chr2R 22945037 22945082 chr2R 22945171 22945216 9 134 3.0 3.0 3.0 2.2 179 chr2R 22945037 exon CG42694 + chr2R 22945126 3` UTR CG42694 + chr2R 22945216 intergenic CG42694 + chr2R_9_22945001 chr2R_22945001 RAL-911 771 chr2R 23155703 23155730 chr2R 23155849 23155866 5 144 3.0 1.5 2.2 1.6 163 chr2R 23155703 intron CG9899 + chr2R 23155784 intron CG9899 + chr2R 23155866 intron CG9899 + chr2R_5_23155001 chr2R_23155001 RAL-911 772 chr2R 23236897 23236935 chr2R 23237006 23237044 10 108 4.0 3.0 3.5 2.2 147 chr2R 23236897 intergenic not near genes chr2R 23236970 intergenic not near genes chr2R 23237044 intergenic not near genes chr2R_10_23235001 chr2R_23235001 RAL-911 773 chr2R 23339495 23339516 chr2R 23339594 23339616 5 100 2.0 4.5 3.2 1.2 121 chr2R 23339495 intergenic not near genes chr2R 23339556 intergenic not near genes chr2R 23339616 intergenic not near genes chr2R_5_23335001 chr2R_23335001 RAL-911 774 chr2R 23346536 23346555 chr2R 23346615 23346651 6 91 0.5 1.5 1.0 3.0 115 chr2R 23346536 intron CG3502 - chr2R 23346594 intron CG3502 - chr2R 23346651 intron,5` UTR CG3502 -,CG9863 + chr2R_6_23345001 chr2R_23345001 RAL-911 775 chr2R 23402594 23402641 chr2R 23407690 23407737 flea 6 5096 2.5 3.5 3.0 1.5 5143 chr2R 23402594 intergenic CG3520 - chr2R 23405166 intergenic not near genes chr2R 23407737 intergenic not near genes chr2R_6_23405001 chr2R_23405001 RAL-911 776 chr2R 23553710 23553723 chr2R 23553820 23553833 5 110 7.0 1.5 4.2 1.0 123 chr2R 23553710 intron pita - chr2R 23553772 intron pita - chr2R 23553833 intron pita - chr2R_5_23550001 chr2R_23550001 RAL-911 777 chr2R 23554909 23554951 chr2R 23555012 23555051 21 102 3.0 5.0 4.0 4.2 142 chr2R 23554909 intergenic Rrp4 -,pita - chr2R 23554980 intergenic Rrp4 -,pita - chr2R 23555051 3` UTR Rrp4 - chr2R_21_23550001 chr2R_23550001 RAL-911 778 chr2R 23636727 23636733 chr2R 23636799 23636815 4 84 3.0 1.0 2.0 1.3 88 chr2R 23636727 intron retn + chr2R 23636771 intron retn + chr2R 23636815 intron retn + chr2R_4_23635001 chr2R_23635001 RAL-911 779 chr2R 23747328 23747335 chr2R 23748964 23748976 4 1639 14.5 25.0 19.8 0.2 1648 chr2R 23747328 intergenic CG13560 +,egl - chr2R 23748152 3` UTR CG13560 + chr2R 23748976 intergenic CG12491 -,CG34105 -,CG13560 + chr2R_4_23745001 chr2R_23745001 RAL-911 780 chr2R 23784464 23784495 chr2R 23784551 23784593 11 94 3.5 2.5 3.0 2.8 129 chr2R 23784464 intron CG9850 - chr2R 23784528 intron CG9850 - chr2R 23784593 intron CG9850 - chr2R_11_23780001 chr2R_23780001 RAL-911 781 chr2R 23914326 23914330 chr2R 23921939 23921974 412 4 7634 3.5 2.0 2.8 1.1 7648 chr2R 23914326 exon kcc + chr2R 23918150 intron kcc + chr2R 23921974 exon kcc + chr2R_4_23915001 chr2R_23915001 RAL-911 782 chr2R 23986492 23986540 chr2R 23986592 23986640 9 97 3.5 5.5 4.5 1.6 148 chr2R 23986492 intron Phm - chr2R 23986566 intron Phm - chr2R 23986640 intron,5` UTR Phm -,CG30178 + chr2R_9_23985001 chr2R_23985001 RAL-911 783 chr2R 24031361 24031408 chr2R 24031465 24031480 18 100 8.5 5.5 7.0 2.2 119 chr2R 24031361 5` UTR CG30172 - chr2R 24031420 5` UTR CG30172 - chr2R 24031480 intergenic CG30172 -,Chi - chr2R_18_24030001 chr2R_24030001 RAL-911 784 chr2R 24177215 24177256 chr2R 24184720 24184756 412 10 7502 3.0 4.5 3.8 2.1 7541 chr2R 24177215 3` UTR Nop60B + chr2R 24180986 intron Nop60B + chr2R 24184756 3` UTR Nop60B + chr2R_10_24180001 chr2R_24180001 RAL-911 785 chr2R 24321149 24321165 chr2R 24321265 24321282 4 114 1.5 5.0 3.2 1.0 133 chr2R 24321149 intergenic not near genes chr2R 24321216 intergenic not near genes chr2R 24321282 intergenic not near genes chr2R_4_24320001 chr2R_24320001 RAL-911 786 chr2R 24353415 24353455 chr2R 24361788 24361813 roo 13 8376 2.5 3.0 2.8 3.4 8398 chr2R 24353415 intron,intron bs +,CR44811 - chr2R 24357614 intron,intron bs +,CR44811 - chr2R 24361813 intron,intron bs +,CR44811 - chr2R_13_24355001 chr2R_24355001 RAL-911 787 chr2R 24383808 24383857 chr2R 24383909 24383941 8 98 4.0 0.5 2.2 2.5 133 chr2R 24383808 intron mAChR-A - chr2R 24383874 intron mAChR-A - chr2R 24383941 exon mAChR-A - chr2R_8_24380001 chr2R_24380001 RAL-911 788 chr2R 24430932 24430947 chr2R 24431009 24431050 4 99 0.0 2.5 1.2 1.8 118 chr2R 24430932 intergenic CG15873 -,Pgam5-2 - chr2R 24430991 intergenic CG15873 -,Pgam5-2 - chr2R 24431050 intergenic Pgam5-2 -,CG15873 - chr2R_4_24430001 chr2R_24430001 RAL-911 789 chr2R 24444258 24444307 chr2R 24444408 24444459 14 150 0.5 1.5 1.0 7.0 201 chr2R 24444258 intergenic not near genes chr2R 24444358 intergenic not near genes chr2R 24444459 intergenic not near genes chr2R_14_24440001 chr2R_24440001 RAL-911 790 chr2R 24727866 24727892 chr2R 24735394 24735414 mdg1 4 7526 3.5 0.0 1.8 1.4 7548 chr2R 24727866 intron Mid1 - chr2R 24731640 intron Mid1 - chr2R 24735414 intron Mid1 - chr2R_4_24730001 chr2R_24730001 RAL-911 791 chr2R 25061348 25061369 chr2R 25061418 25061468 5 84 1.5 1.5 1.5 2.0 120 chr2R 25061348 intergenic not near genes chr2R 25061408 intergenic not near genes chr2R 25061468 intergenic gsb + chr2R_5_25060001 chr2R_25060001 RAL-911 792 chr2R 25081728 25081765 chr2R 25081895 25081932 10 163 5.0 7.0 6.0 1.4 204 chr2R 25081728 intron gol - chr2R 25081830 intron gol - chr2R 25081932 intron gol - chr2R_10_25080001 chr2R_25080001 RAL-911 793 chr2R 25101260 25101292 chr2R 25101382 25101402 6 116 4.0 2.0 3.0 1.5 142 chr2R 25101260 intron lov - chr2R 25101331 intron lov - chr2R 25101402 intron lov - chr2R_6_25100001 chr2R_25100001 RAL-911 794 chr2R 25102504 25102537 chr2R 25102693 25102726 4 187 2.0 2.5 2.2 1.2 222 chr2R 25102504 intron lov - chr2R 25102615 intron lov - chr2R 25102726 intron lov - chr2R_4_25100001 chr2R_25100001 RAL-911 795 chr2R 25102540 25102551 chr2R 25102692 25102740 4 176 1.0 2.5 1.8 1.4 200 chr2R 25102540 intron lov - chr2R 25102640 intron lov - chr2R 25102740 intron lov - chr2R_4_25100001 chr2R_25100001 RAL-911 796 chr2R 25104787 25104803 chr2R 25104925 25104943 6 141 2.0 3.5 2.8 1.6 156 chr2R 25104787 intron lov - chr2R 25104865 intron lov - chr2R 25104943 intron lov - chr2R_6_25100001 chr2R_25100001 RAL-911 797 chr2R 25130991 25131040 chr2R 25131088 25131133 11 91 1.5 2.5 2.0 3.7 142 chr2R 25130991 intron lov - chr2R 25131062 intron lov - chr2R 25131133 intron lov - chr2R_11_25130001 chr2R_25130001 RAL-911 798 chr2R 25141643 25141683 chr2R 25159353 25159361 roo 5 17699 2.5 6.5 4.5 0.9 17718 chr2R 25141643 intergenic not near genes chr2R 25150502 intergenic not near genes chr2R 25159361 intergenic not near genes chr2R_5_25150001 chr2R_25150001 RAL-911 799 chr2R 25171475 25171509 chr2R 25171572 25171606 10 97 3.5 5.0 4.2 1.9 131 chr2R 25171475 intergenic not near genes chr2R 25171540 intergenic not near genes chr2R 25171606 intergenic not near genes chr2R_10_25170001 chr2R_25170001 RAL-911 800 chr2R 25193321 25193370 chr2R 25193483 25193534 7 161 1.5 1.5 1.5 2.8 213 chr2R 25193321 intron CG9380 - chr2R 25193428 intron CG9380 - chr2R 25193534 intron CG9380 - chr2R_7_25190001 chr2R_25190001 RAL-911 801 chr2R 25243956 25244001 chr2R 25244054 25244068 11 95 4.0 0.5 2.2 3.4 112 chr2R 25243956 intron CG9380 - chr2R 25244012 intron CG9380 - chr2R 25244068 intron CG9380 - chr2R_11_25240001 chr2R_25240001 RAL-911 802 chr2R 25253438 25253479 chr2R 25253529 25253576 7 92 3.0 8.5 5.8 1.0 138 chr2R 25253438 intron,intron CG9380 -,CG30428 + chr2R 25253507 intron,intron CG9380 -,CG30428 + chr2R 25253576 intron,intron CG9380 -,CG30428 + chr2R_7_25250001 chr2R_25250001 RAL-911 803 chr3L 52890 52933 chr3L 52993 53036 6 98 4.0 1.5 2.8 1.6 146 chr3L 52890 intergenic not near genes chr3L 52963 intergenic not near genes chr3L 53036 intergenic not near genes chr3L_6_50001 chr3L_50001 RAL-911 804 chr3L 88723 88742 chr3L 90663 90672 5 1938 4.5 3.5 4.0 1.0 1949 chr3L 88723 intergenic not near genes chr3L 89698 intergenic not near genes chr3L 90672 intergenic not near genes chr3L_5_85001 chr3L_85001 RAL-911 805 chr3L 110196 110241 chr3L 119377 119411 roo 10 9175 5.0 6.0 5.5 1.5 9215 chr3L 110196 intergenic not near genes chr3L 114804 intergenic not near genes chr3L 119411 intergenic not near genes chr3L_10_110001 chr3L_110001 RAL-911 806 chr3L 365508 365549 chr3L 365613 365655 9 104 4.0 3.5 3.8 1.9 147 chr3L 365508 3` UTR CG1233 + chr3L 365582 3` UTR CG1233 + chr3L 365655 3` UTR CG1233 + chr3L_9_365001 chr3L_365001 RAL-911 807 chr3L 402701 402717 chr3L 409754 409790 297 7 7070 3.0 5.5 4.2 1.3 7089 chr3L 402701 intergenic not near genes chr3L 406246 intergenic not near genes chr3L 409790 intergenic not near genes chr3L_7_405001 chr3L_405001 RAL-911 808 chr3L 561461 561493 chr3L 561558 561590 10 94 3.5 0.0 1.8 3.6 129 chr3L 561461 intron hipk + chr3L 561526 intron hipk + chr3L 561590 intron hipk + chr3L_10_560001 chr3L_560001 RAL-911 809 chr3L 566784 566818 chr3L 567150 567161 4 364 5.5 6.0 5.8 0.6 377 chr3L 566784 intron hipk + chr3L 566972 intron hipk + chr3L 567161 intron hipk + chr3L_4_565001 chr3L_565001 RAL-911 810 chr3L 592950 592959 chr3L 593041 593055 6 95 6.0 9.0 7.5 0.7 105 chr3L 592950 intergenic MED14 + chr3L 593002 intergenic MED14 + chr3L 593055 intergenic MED14 + chr3L_6_590001 chr3L_590001 RAL-911 811 chr3L 606875 606913 chr3L 606971 607012 10 92 0.0 0.0 0.0 10.0 137 chr3L 606875 intergenic Reg-2 - chr3L 606944 intergenic Reg-2 - chr3L 607012 intergenic Reg-2 - chr3L_10_605001 chr3L_605001 RAL-911 812 chr3L 618418 618440 chr3L 618562 618579 10 143 3.0 2.5 2.8 2.6 161 chr3L 618418 intergenic not near genes chr3L 618498 intergenic not near genes chr3L 618579 intergenic not near genes chr3L_10_615001 chr3L_615001 RAL-911 813 chr3L 642467 642489 chr3L 642560 642564 4 90 4.0 3.5 3.8 0.8 97 chr3L 642467 5` UTR CR43334 + chr3L 642516 5` UTR CR43334 + chr3L 642564 5` UTR CR43334 + chr3L_4_640001 chr3L_640001 RAL-911 814 chr3L 651380 651399 chr3L 651488 651507 5 108 5.0 6.5 5.8 0.7 127 chr3L 651380 intergenic Gale +,CG3402 - chr3L 651444 intergenic CG3402 -,Gale + chr3L 651507 intergenic CG3402 -,Gale + chr3L_5_650001 chr3L_650001 RAL-911 815 chr3L 651400 651417 chr3L 651482 651525 9 102 2.5 6.5 4.5 1.6 125 chr3L 651400 intergenic Gale +,CG3402 - chr3L 651462 intergenic CG3402 -,Gale + chr3L 651525 intergenic CG3402 -,Gale + chr3L_9_650001 chr3L_650001 RAL-911 816 chr3L 705889 705932 chr3L 705994 706048 15 115 3.5 6.0 4.8 2.6 159 chr3L 705889 intergenic CG13895 -,CR44514 + chr3L 705968 3` UTR CG13895 - chr3L 706048 3` UTR CG13895 - chr3L_15_705001 chr3L_705001 RAL-911 817 chr3L 748194 748237 chr3L 748291 748335 16 98 4.0 6.0 5.0 2.7 141 chr3L 748194 intron hng3 - chr3L 748264 intron hng3 - chr3L 748335 intron hng3 - chr3L_16_745001 chr3L_745001 RAL-911 818 chr3L 925167 925205 chr3L 932603 932651 mdg1 7 7437 0.5 5.0 2.8 1.8 7484 chr3L 925167 intron Glut1 + chr3L 928909 intron Glut1 + chr3L 932651 intron Glut1 + chr3L_7_925001 chr3L_925001 RAL-911 819 chr3L 933912 933944 chr3L 934034 934067 7 122 2.0 3.0 2.5 2.0 155 chr3L 933912 intron Glut1 + chr3L 933990 intron Glut1 + chr3L 934067 intron Glut1 + chr3L_7_930001 chr3L_930001 RAL-911 820 chr3L 939764 939796 chr3L 940905 940936 jockey 9 1140 3.5 3.5 3.5 2.0 1172 chr3L 939764 intron Glut1 + chr3L 940350 intron Glut1 + chr3L 940936 intron Glut1 + chr3L_9_940001 chr3L_940001 RAL-911 821 chr3L 960998 961043 chr3L 961110 961156 18 113 5.0 5.0 5.0 3.0 158 chr3L 960998 intron Glut1 + chr3L 961077 intron Glut1 + chr3L 961156 intron Glut1 + chr3L_18_960001 chr3L_960001 RAL-911 822 chr3L 986630 986657 chr3L 986726 986753 8 96 1.5 5.0 3.2 1.9 123 chr3L 986630 intergenic not near genes chr3L 986692 intergenic not near genes chr3L 986753 intergenic not near genes chr3L_8_985001 chr3L_985001 RAL-911 823 chr3L 1003038 1003062 chr3L 1003135 1003159 4 94 3.5 2.5 3.0 1.0 121 chr3L 1003038 intron trio - chr3L 1003098 intron trio - chr3L 1003159 intron trio - chr3L_4_1000001 chr3L_1000001 RAL-911 824 chr3L 1040535 1040558 chr3L 1040633 1040662 7 102 2.5 2.0 2.2 2.2 127 chr3L 1040535 intron bab1 - chr3L 1040598 intron bab1 - chr3L 1040662 intron bab1 - chr3L_7_1040001 chr3L_1040001 RAL-911 825 chr3L 1109616 1109658 chr3L 1109722 1109753 8 96 7.0 3.0 5.0 1.3 137 chr3L 1109616 intergenic not near genes chr3L 1109684 intergenic not near genes chr3L 1109753 intergenic not near genes chr3L_8_1105001 chr3L_1105001 RAL-911 826 chr3L 1154129 1154160 chr3L 1163289 1163290 roo 4 9153 6.0 1.5 3.8 0.8 9161 chr3L 1154129 intron bab2 - chr3L 1158710 intron bab2 - chr3L 1163290 intron bab2 - chr3L_4_1155001 chr3L_1155001 RAL-911 827 chr3L 1167002 1167007 chr3L 1167099 1167104 4 97 4.5 3.5 4.0 0.8 102 chr3L 1167002 intron bab2 - chr3L 1167053 intron bab2 - chr3L 1167104 intron bab2 - chr3L_4_1165001 chr3L_1165001 RAL-911 828 chr3L 1214202 1214243 chr3L 1214299 1214340 5 92 3.5 1.0 2.2 1.6 138 chr3L 1214202 intron mwh + chr3L 1214271 intron mwh + chr3L 1214340 intron mwh + chr3L_5_1210001 chr3L_1210001 RAL-911 829 chr3L 1364017 1364066 chr3L 1364123 1364172 4 100 0.0 3.5 1.8 1.4 155 chr3L 1364017 intron Ptp61F - chr3L 1364094 intron Ptp61F - chr3L 1364172 intron Ptp61F - chr3L_4_1360001 chr3L_1360001 RAL-911 830 chr3L 1480981 1481018 chr3L 1481080 1481105 5 89 2.5 1.5 2.0 1.7 124 chr3L 1480981 intron stet - chr3L 1481043 intron stet - chr3L 1481105 intron stet - chr3L_5_1480001 chr3L_1480001 RAL-911 831 chr3L 1506000 1506022 chr3L 1513609 1513639 17.6 4 7612 2.5 3.0 2.8 1.1 7639 chr3L 1506000 intron,intron Psa +,cue - chr3L 1509820 intron,intron Psa +,cue - chr3L 1513639 intron,intron Psa +,cue - chr3L_4_1505001 chr3L_1505001 RAL-911 832 chr3L 1585915 1585935 chr3L 1586015 1586036 10 101 5.0 3.0 4.0 2.0 121 chr3L 1585915 intron CG13917 + chr3L 1585976 intron CG13917 + chr3L 1586036 intron CG13917 + chr3L_10_1585001 chr3L_1585001 RAL-911 833 chr3L 1738353 1738384 chr3L 1738450 1738481 8 97 3.0 0.5 1.8 2.9 128 chr3L 1738353 intergenic Gk +,CG18173 - chr3L 1738417 5` UTR Gk + chr3L 1738481 5` UTR Gk + chr3L_8_1735001 chr3L_1735001 RAL-911 834 chr3L 1740840 1740884 chr3L 1741101 1741107 pogo 9 249 5.0 5.5 5.2 1.5 267 chr3L 1740840 intron Gk + chr3L 1740974 intron Gk + chr3L 1741107 intron Gk + chr3L_9_1740001 chr3L_1740001 RAL-911 835 chr3L 2035250 2035301 chr3L 2035346 2035359 7 82 3.5 0.0 1.8 2.5 109 chr3L 2035250 intergenic not near genes chr3L 2035304 intergenic not near genes chr3L 2035359 intergenic not near genes chr3L_7_2035001 chr3L_2035001 RAL-911 836 chr3L 2108231 2108279 chr3L 2113455 2113502 copia 16 5223 4.0 4.5 4.2 3.1 5271 chr3L 2108231 intron sls - chr3L 2110866 intron sls - chr3L 2113502 intron sls - chr3L_16_2110001 chr3L_2110001 RAL-911 837 chr3L 2139190 2139219 chr3L 2139291 2139320 5 96 4.5 2.5 3.5 1.1 130 chr3L 2139190 intron zormin - chr3L 2139255 intron zormin - chr3L 2139320 intron zormin - chr3L_5_2135001 chr3L_2135001 RAL-911 838 chr3L 2145935 2145959 chr3L 2146064 2146074 7 126 0.5 2.5 1.5 2.8 139 chr3L 2145935 intron zormin - chr3L 2146004 intron zormin - chr3L 2146074 intron zormin - chr3L_7_2145001 chr3L_2145001 RAL-911 839 chr3L 2168765 2168803 chr3L 2168873 2168896 8 107 1.5 1.5 1.5 3.2 131 chr3L 2168765 exon CG15879 - chr3L 2168830 intron CG15879 - chr3L 2168896 intron CG15879 - chr3L_8_2165001 chr3L_2165001 RAL-911 840 chr3L 2277956 2278003 chr3L 2278172 2278219 6 216 1.0 2.5 1.8 2.1 263 chr3L 2277956 3` UTR yellow-g2 + chr3L 2278088 intergenic yellow-g2 + chr3L 2278219 intergenic yellow-g2 + chr3L_6_2275001 chr3L_2275001 RAL-911 841 chr3L 2307995 2308034 chr3L 2308109 2308159 8 120 2.0 5.0 3.5 1.8 164 chr3L 2307995 intergenic not near genes chr3L 2308077 intergenic not near genes chr3L 2308159 intergenic not near genes chr3L_8_2305001 chr3L_2305001 RAL-911 842 chr3L 2315966 2315997 chr3L 2316062 2316093 8 96 5.0 2.5 3.8 1.7 127 chr3L 2315966 intergenic not near genes chr3L 2316030 intergenic not near genes chr3L 2316093 intergenic not near genes chr3L_8_2315001 chr3L_2315001 RAL-911 843 chr3L 2331576 2331613 chr3L 2331670 2331706 5 93 5.5 3.5 4.5 0.9 130 chr3L 2331576 intron MsR1 + chr3L 2331641 intron MsR1 + chr3L 2331706 intron MsR1 + chr3L_5_2330001 chr3L_2330001 RAL-911 844 chr3L 2561518 2561555 chr3L 2561614 2561652 4 94 1.5 3.0 2.2 1.2 134 chr3L 2561518 intron msn - chr3L 2561585 intron msn - chr3L 2561652 intron msn - chr3L_4_2560001 chr3L_2560001 RAL-911 845 chr3L 2568194 2568209 chr3L 2568265 2568269 4 75 0.5 0.0 0.2 3.3 75 chr3L 2568194 intron msn - chr3L 2568232 intron msn - chr3L 2568269 intron msn - chr3L_4_2565001 chr3L_2565001 RAL-911 846 chr3L 2591888 2591895 chr3L 2592007 2592014 4 119 7.0 2.0 4.5 0.7 126 chr3L 2591888 intron dos + chr3L 2591951 intron dos + chr3L 2592014 intron dos + chr3L_4_2590001 chr3L_2590001 RAL-911 847 chr3L 2591897 2591924 chr3L 2592006 2592043 5 117 1.5 2.0 1.8 1.8 146 chr3L 2591897 intron dos + chr3L 2591970 intron dos + chr3L 2592043 intron dos + chr3L_5_2590001 chr3L_2590001 RAL-911 848 chr3L 2626936 2626955 chr3L 2627017 2627053 4 91 3.5 2.0 2.8 1.1 117 chr3L 2626936 intron Pxn - chr3L 2626994 intron Pxn - chr3L 2627053 intron Pxn - chr3L_4_2625001 chr3L_2625001 RAL-911 849 chr3L 2667870 2667922 chr3L 2667966 2668011 5 93 2.5 2.5 2.5 1.4 141 chr3L 2667870 intron Fife - chr3L 2667940 intron Fife - chr3L 2668011 intron Fife - chr3L_5_2665001 chr3L_2665001 RAL-911 850 chr3L 2683926 2683978 chr3L 2684021 2684074 22 94 3.5 1.0 2.2 6.9 148 chr3L 2683926 intron Fife - chr3L 2684000 intron Fife - chr3L 2684074 intron Fife - chr3L_22_2680001 chr3L_2680001 RAL-911 851 chr3L 2711003 2711045 chr3L 2711118 2711162 14 116 1.0 1.0 1.0 7.0 159 chr3L 2711003 intron Fife - chr3L 2711082 intron Fife - chr3L 2711162 intron Fife - chr3L_14_2710001 chr3L_2710001 RAL-911 852 chr3L 2719526 2719559 chr3L 2719648 2719681 7 122 3.5 4.0 3.8 1.5 155 chr3L 2719526 3` UTR Mrtf - chr3L 2719604 3` UTR Mrtf - chr3L 2719681 3` UTR Mrtf - chr3L_7_2715001 chr3L_2715001 RAL-911 853 chr3L 2795705 2795742 chr3L 2795848 2795883 8 142 3.5 0.5 2.0 2.7 178 chr3L 2795705 intron CG43444 - chr3L 2795794 intron CG43444 - chr3L 2795883 intron CG43444 - chr3L_8_2795001 chr3L_2795001 RAL-911 854 chr3L 2835145 2835145 chr3L 17500201 17500202 4 14665057 4.0 14.0 9.0 0.4 14665057 chr3L 2835145 intron CG43444 - chr3L 10167674 intron dpr10 - chr3L 17500202 intron Oatp74D + chr3L_4_10165001 chr3L_10165001 RAL-911 855 chr3L 2927822 2927863 chr3L 2936119 2936155 Tirant 4 8292 4.0 3.5 3.8 0.8 8333 chr3L 2927822 intron Shab + chr3L 2931988 intron Shab + chr3L 2936155 intron Shab + chr3L_4_2930001 chr3L_2930001 RAL-911 856 chr3L 2966705 2966722 chr3L 2974150 2974167 mdg1 5 7445 8.5 4.0 6.2 0.7 7462 chr3L 2966705 intergenic not near genes chr3L 2970436 intergenic not near genes chr3L 2974167 intergenic not near genes chr3L_5_2970001 chr3L_2970001 RAL-911 857 chr3L 2987706 2987719 chr3L 2987803 2987821 5 101 1.5 0.0 0.8 2.8 115 chr3L 2987706 intergenic not near genes chr3L 2987764 intergenic not near genes chr3L 2987821 intergenic not near genes chr3L_5_2985001 chr3L_2985001 RAL-911 858 chr3L 2988889 2988921 chr3L 2988982 2989021 8 96 2.5 2.5 2.5 2.3 132 chr3L 2988889 intergenic not near genes chr3L 2988955 intergenic not near genes chr3L 2989021 intergenic not near genes chr3L_8_2985001 chr3L_2985001 RAL-911 859 chr3L 3040313 3040329 chr3L 3042122 3042138 S-element 7 1809 8.5 1.0 4.8 1.2 1825 chr3L 3040313 3` UTR CG2162 + chr3L 3041226 intergenic not near genes chr3L 3042138 intergenic Jafrac2 + chr3L_7_3040001 chr3L_3040001 RAL-911 860 chr3L 3051724 3051754 chr3L 3051986 3052010 pogo 9 261 9.0 1.0 5.0 1.5 286 chr3L 3051724 3` UTR CG32485 + chr3L 3051867 intergenic CG32485 + chr3L 3052010 intergenic CG32485 + chr3L_9_3050001 chr3L_3050001 RAL-911 861 chr3L 3252322 3252370 chr3L 3252418 3252466 4 96 2.0 0.5 1.2 1.8 144 chr3L 3252322 5` UTR CR43626 + chr3L 3252394 5` UTR CR43626 + chr3L 3252466 5` UTR CR43626 + chr3L_4_3250001 chr3L_3250001 RAL-911 862 chr3L 3259617 3259639 chr3L 3259717 3259754 8 109 1.0 0.5 0.8 4.4 137 chr3L 3259617 intron ckd + chr3L 3259686 intron ckd + chr3L 3259754 intron ckd + chr3L_8_3255001 chr3L_3255001 RAL-911 863 chr3L 3259644 3259831 chr3L 3259716 3259935 11 112 1.0 0.5 0.8 6.1 291 chr3L 3259644 intron ckd + chr3L 3259790 intron ckd + chr3L 3259935 intron ckd + chr3L_11_3255001 chr3L_3255001 RAL-911 864 chr3L 3281461 3281472 chr3L 3281932 3281972 Doc 5 493 2.0 3.0 2.5 1.4 511 chr3L 3281461 intron CG12017 + chr3L 3281716 intron CG12017 + chr3L 3281972 intron CG12017 + chr3L_5_3280001 chr3L_3280001 RAL-911 865 chr3L 3381030 3381076 chr3L 3381127 3381173 14 96 2.5 3.5 3.0 3.5 143 chr3L 3381030 intergenic not near genes chr3L 3381102 intergenic not near genes chr3L 3381173 intergenic not near genes chr3L_14_3380001 chr3L_3380001 RAL-911 866 chr3L 3436272 3436316 chr3L 3436371 3436415 12 99 4.0 4.0 4.0 2.4 143 chr3L 3436272 intron eIF5B - chr3L 3436344 intron eIF5B - chr3L 3436415 intron eIF5B - chr3L_12_3435001 chr3L_3435001 RAL-911 867 chr3L 3439236 3439277 chr3L 3439357 3439392 7 118 3.0 1.5 2.2 2.2 156 chr3L 3439236 intron eIF5B - chr3L 3439314 intron eIF5B - chr3L 3439392 intron eIF5B - chr3L_7_3435001 chr3L_3435001 RAL-911 868 chr3L 3451355 3451404 chr3L 3451475 3451524 23 120 4.5 2.0 3.2 5.5 169 chr3L 3451355 intron eIF5B - chr3L 3451440 intron eIF5B - chr3L 3451524 intron eIF5B - chr3L_23_3450001 chr3L_3450001 RAL-911 869 chr3L 3475071 3475113 chr3L 3475517 3475560 jockey 6 458 1.0 1.0 1.0 3.0 489 chr3L 3475071 intron CG42324 + chr3L 3475316 intron CG42324 + chr3L 3475560 intron CG42324 + chr3L_6_3475001 chr3L_3475001 RAL-911 870 chr3L 3484397 3484434 chr3L 3484494 3484531 5 97 1.5 2.0 1.8 1.8 134 chr3L 3484397 intron,intron CG42324 +,CG43074 - chr3L 3484464 intron,exon CG42324 +,CG43074 - chr3L 3484531 intron,intron CG42324 +,CG43074 - chr3L_5_3480001 chr3L_3480001 RAL-911 871 chr3L 3494752 3494779 chr3L 3494850 3494876 12 97 6.0 5.5 5.8 1.8 124 chr3L 3494752 intron CG42324 + chr3L 3494814 intron CG42324 + chr3L 3494876 intron CG42324 + chr3L_12_3490001 chr3L_3490001 RAL-911 872 chr3L 3565940 3565970 chr3L 3566013 3566022 4 68 1.5 3.0 2.2 1.2 82 chr3L 3565940 intron Eip63E + chr3L 3565981 intron Eip63E + chr3L 3566022 intron Eip63E + chr3L_4_3565001 chr3L_3565001 RAL-911 873 chr3L 3566374 3566420 chr3L 3566477 3566523 6 103 1.5 0.5 1.0 3.0 149 chr3L 3566374 intron Eip63E + chr3L 3566448 intron Eip63E + chr3L 3566523 intron Eip63E + chr3L_6_3565001 chr3L_3565001 RAL-911 874 chr3L 3601280 3601324 chr3L 3606611 3606630 copia 7 5327 4.0 1.0 2.5 2.0 5350 chr3L 3601280 intron Eip63E + chr3L 3603955 intron Eip63E + chr3L 3606630 intron Eip63E + chr3L_7_3600001 chr3L_3600001 RAL-911 875 chr3L 3622298 3622331 chr3L 3622397 3622429 4 98 0.0 0.0 0.0 4.0 131 chr3L 3622298 intergenic not near genes chr3L 3622364 intergenic not near genes chr3L 3622429 intergenic not near genes chr3L_4_3620001 chr3L_3620001 RAL-911 876 chr3L 3747120 3747168 chr3L 3751150 3751198 11 4032 22.5 15.5 19.0 0.6 4078 chr3L 3747120 intron CG32264 - chr3L 3749159 intron CG32264 - chr3L 3751198 intron CG32264 - chr3L_11_3745001 chr3L_3745001 RAL-911 877 chr3L 3766718 3766738 chr3L 3766824 3766844 5 106 3.0 0.0 1.5 2.0 126 chr3L 3766718 intron CG32264 - chr3L 3766781 intron CG32264 - chr3L 3766844 intron CG32264 - chr3L_5_3765001 chr3L_3765001 RAL-911 878 chr3L 3783259 3783283 chr3L 3783355 3783359 4 89 2.0 2.0 2.0 1.3 100 chr3L 3783259 intron CG32264 - chr3L 3783309 intron CG32264 - chr3L 3783359 intron CG32264 - chr3L_4_3780001 chr3L_3780001 RAL-911 879 chr3L 3797220 3797264 chr3L 3797323 3797367 9 100 1.0 4.5 2.8 2.4 147 chr3L 3797220 intron CG32264 - chr3L 3797294 intron CG32264 - chr3L 3797367 intron CG32264 - chr3L_9_3795001 chr3L_3795001 RAL-911 880 chr3L 3833717 3833751 chr3L 3833978 3834012 pogo 9 260 3.5 0.5 2.0 3.0 295 chr3L 3833717 intron enc + chr3L 3833864 intron enc + chr3L 3834012 intron enc + chr3L_9_3830001 chr3L_3830001 RAL-911 881 chr3L 3889127 3889141 chr3L 3889230 3889244 4 103 0.0 2.5 1.2 1.8 117 chr3L 3889127 intergenic not near genes chr3L 3889186 intergenic not near genes chr3L 3889244 intergenic not near genes chr3L_4_3885001 chr3L_3885001 RAL-911 882 chr3L 3935816 3935846 chr3L 3935914 3935944 13 98 0.0 5.0 2.5 3.7 128 chr3L 3935816 5` UTR Eip63F-2 + chr3L 3935880 5` UTR Eip63F-2 + chr3L 3935944 5` UTR Eip63F-2 + chr3L_13_3935001 chr3L_3935001 RAL-911 883 chr3L 3994983 3995030 chr3L 3995097 3995139 5 113 1.0 4.5 2.8 1.3 156 chr3L 3994983 intergenic not near genes chr3L 3995061 intergenic not near genes chr3L 3995139 intergenic not near genes chr3L_5_3995001 chr3L_3995001 RAL-911 884 chr3L 4058832 4058864 chr3L 4058932 4058964 6 100 1.0 4.5 2.8 1.6 132 chr3L 4058832 3` UTR CG1136 + chr3L 4058898 3` UTR CG1136 + chr3L 4058964 3` UTR CG1136 + chr3L_6_4055001 chr3L_4055001 RAL-911 885 chr3L 4233073 4233122 chr3L 4233181 4233226 9 104 0.0 2.0 1.0 4.5 153 chr3L 4233073 intron ImpL2 - chr3L 4233150 intron ImpL2 - chr3L 4233226 intron ImpL2 - chr3L_9_4230001 chr3L_4230001 RAL-911 886 chr3L 4328744 4328761 chr3L 4336247 4336279 412 16 7514 4.0 4.5 4.2 3.1 7535 chr3L 4328744 intron Cip4 - chr3L 4332512 intron Cip4 - chr3L 4336279 exon Cip4 - chr3L_16_4330001 chr3L_4330001 RAL-911 887 chr3L 4344870 4345065 chr3L 4344997 4345161 15 108 0.0 0.0 0.0 15.0 291 chr3L 4344870 intron Cip4 - chr3L 4345016 intron Cip4 - chr3L 4345161 intron Cip4 - chr3L_15_4345001 chr3L_4345001 RAL-911 888 chr3L 4364212 4364233 chr3L 4364321 4364342 6 108 2.0 9.5 5.8 0.9 130 chr3L 4364212 intergenic Cip4 -,mRpS6 + chr3L 4364277 intergenic Cip4 -,mRpS6 + chr3L 4364342 intergenic mRpS6 +,Cip4 - chr3L_6_4360001 chr3L_4360001 RAL-911 889 chr3L 4440736 4440760 chr3L 4440834 4440861 6 100 5.5 2.0 3.8 1.2 125 chr3L 4440736 intergenic not near genes chr3L 4440798 intergenic not near genes chr3L 4440861 intergenic not near genes chr3L_6_4440001 chr3L_4440001 RAL-911 890 chr3L 4503894 4503916 chr3L 4503991 4504007 8 94 6.0 0.0 3.0 2.0 113 chr3L 4503894 intron NT1 - chr3L 4503950 intron NT1 - chr3L 4504007 intron NT1 - chr3L_8_4500001 chr3L_4500001 RAL-911 891 chr3L 4580313 4580334 chr3L 4580390 4580438 5 99 2.0 3.0 2.5 1.4 125 chr3L 4580313 intron CG42540 + chr3L 4580376 intron CG42540 + chr3L 4580438 intron CG42540 + chr3L_5_4580001 chr3L_4580001 RAL-911 892 chr3L 4901118 4901149 chr3L 4907328 4907359 diver 11 6207 12.0 9.0 10.5 1.0 6241 chr3L 4901118 intergenic CG13704 + chr3L 4904238 intergenic not near genes chr3L 4907359 intergenic not near genes chr3L_11_4900001 chr3L_4900001 RAL-911 893 chr3L 4898330 4898369 chr3L 4909472 4909511 diver 14 11142 23.0 9.5 16.2 0.8 11181 chr3L 4898330 3` UTR CG13705 + chr3L 4903920 intergenic not near genes chr3L 4909511 intergenic not near genes chr3L_14_4900001 chr3L_4900001 RAL-911 894 chr3L 4941442 4941486 chr3L 4941541 4941585 8 94 2.0 2.5 2.2 2.5 143 chr3L 4941442 intron Con - chr3L 4941514 intron Con - chr3L 4941585 intron Con - chr3L_8_4940001 chr3L_4940001 RAL-911 895 chr3L 5045446 5045478 chr3L 5050235 5050274 Doc 11 4797 5.0 4.0 4.5 2.0 4828 chr3L 5045446 intron Con - chr3L 5047860 intron Con - chr3L 5050274 intron Con - chr3L_11_5045001 chr3L_5045001 RAL-911 896 chr3L 5103593 5103623 chr3L 5103693 5103708 8 98 4.0 0.0 2.0 2.7 115 chr3L 5103593 intergenic not near genes chr3L 5103650 intergenic not near genes chr3L 5103708 intergenic not near genes chr3L_8_5100001 chr3L_5100001 RAL-911 897 chr3L 5104480 5104511 chr3L 5124621 5124665 10 20152 3.5 4.5 4.0 2.0 20185 chr3L 5104480 intergenic not near genes chr3L 5114572 intergenic not near genes chr3L 5124665 intergenic not near genes chr3L_10_5110001 chr3L_5110001 RAL-911 898 chr3L 5154872 5154896 chr3L 5155018 5155036 4 143 3.0 3.5 3.2 1.0 164 chr3L 5154872 intergenic Srp54k + chr3L 5154954 intergenic Srp54k + chr3L 5155036 intergenic Srp54k + chr3L_4_5150001 chr3L_5150001 RAL-911 899 chr3L 5248988 5249007 chr3L 5249092 5249102 9 101 1.5 3.5 2.5 2.6 114 chr3L 5248988 intron shep - chr3L 5249045 intron shep - chr3L 5249102 intron shep - chr3L_9_5245001 chr3L_5245001 RAL-911 900 chr3L 5327445 5327473 chr3L 5327550 5327578 13 104 5.5 1.5 3.5 2.9 133 chr3L 5327445 intergenic not near genes chr3L 5327512 intergenic not near genes chr3L 5327578 intergenic not near genes chr3L_13_5325001 chr3L_5325001 RAL-911 901 chr3L 5351084 5351134 chr3L 5351189 5351238 16 105 5.0 2.5 3.8 3.3 154 chr3L 5351084 intron lama - chr3L 5351161 intron lama - chr3L 5351238 intron lama - chr3L_16_5350001 chr3L_5350001 RAL-911 902 chr3L 5388197 5388230 chr3L 5388541 5388554 4 338 5.5 5.5 5.5 0.6 357 chr3L 5388197 intergenic not near genes chr3L 5388376 intergenic not near genes chr3L 5388554 intergenic not near genes chr3L_4_5385001 chr3L_5385001 RAL-911 903 chr3L 5485036 5485075 chr3L 5485129 5485177 16 100 4.5 6.0 5.2 2.6 141 chr3L 5485036 intergenic not near genes chr3L 5485106 intergenic not near genes chr3L 5485177 intergenic not near genes chr3L_16_5485001 chr3L_5485001 RAL-911 904 chr3L 5486030 5486066 chr3L 5486140 5486176 9 110 6.5 0.0 3.2 2.1 146 chr3L 5486030 intergenic not near genes chr3L 5486103 intergenic not near genes chr3L 5486176 intergenic not near genes chr3L_9_5485001 chr3L_5485001 RAL-911 905 chr3L 5504107 5504120 chr3L 5504208 5504222 4 102 1.5 3.5 2.5 1.1 115 chr3L 5504107 exon CG34342 - chr3L 5504164 intron CG34342 - chr3L 5504222 intron CG34342 - chr3L_4_5500001 chr3L_5500001 RAL-911 906 chr3L 5504542 5504570 chr3L 5504640 5504668 7 97 3.0 1.0 2.0 2.3 126 chr3L 5504542 intron CG34342 - chr3L 5504605 intron CG34342 - chr3L 5504668 intron CG34342 - chr3L_7_5500001 chr3L_5500001 RAL-911 907 chr3L 5537700 5537735 chr3L 5538062 5538077 jockey 6 354 5.5 2.0 3.8 1.2 377 chr3L 5537700 intergenic not near genes chr3L 5537888 intergenic not near genes chr3L 5538077 intergenic CG10625 - chr3L_6_5535001 chr3L_5535001 RAL-911 908 chr3L 5558609 5558643 chr3L 5558743 5558751 4 124 3.0 7.5 5.2 0.6 142 chr3L 5558609 intergenic not near genes chr3L 5558680 intergenic not near genes chr3L 5558751 intergenic not near genes chr3L_4_5555001 chr3L_5555001 RAL-911 909 chr3L 5597812 5597830 chr3L 5597912 5597929 6 100 4.5 0.5 2.5 1.7 117 chr3L 5597812 intergenic CG5150 + chr3L 5597870 intergenic CG5150 + chr3L 5597929 intergenic not near genes chr3L_6_5595001 chr3L_5595001 RAL-911 910 chr3L 5683263 5683282 chr3L 5683370 5683375 4 104 1.0 4.0 2.5 1.1 112 chr3L 5683263 intron sif + chr3L 5683319 intron sif + chr3L 5683375 intron sif + chr3L_4_5680001 chr3L_5680001 RAL-911 911 chr3L 5750040 5750073 chr3L 5750118 5750118 4 59 2.0 2.5 2.2 1.2 78 chr3L 5750040 3` UTR DnaJ-1 - chr3L 5750079 3` UTR DnaJ-1 - chr3L 5750118 3` UTR DnaJ-1 - chr3L_4_5750001 chr3L_5750001 RAL-911 912 chr3L 5908069 5908104 chr3L 5908169 5908204 8 100 0.0 1.0 0.5 5.3 135 chr3L 5908069 intron CG13288 + chr3L 5908136 intron CG13288 + chr3L 5908204 intron CG13288 + chr3L_8_5905001 chr3L_5905001 RAL-911 913 chr3L 5910011 5910024 chr3L 5910272 5910285 pogo 4 261 9.0 0.0 4.5 0.7 274 chr3L 5910011 intron CG13288 + chr3L 5910148 intron CG13288 + chr3L 5910285 intron CG13288 + chr3L_4_5910001 chr3L_5910001 RAL-911 914 chr3L 5949418 5949439 chr3L 5949529 5949549 4 110 0.0 3.0 1.5 1.6 131 chr3L 5949418 intron CG33993 - chr3L 5949484 intron CG33993 - chr3L 5949549 intron CG33993 - chr3L_4_5945001 chr3L_5945001 RAL-911 915 chr3L 6001665 6001714 chr3L 6004385 6004434 jockey 9 2717 2.5 1.0 1.8 3.2 2769 chr3L 6001665 intron PVRAP + chr3L 6003050 intron PVRAP + chr3L 6004434 intron PVRAP + chr3L_9_6000001 chr3L_6000001 RAL-911 916 chr3L 6014825 6014868 chr3L 6014939 6014945 5 109 1.5 1.5 1.5 2.0 120 chr3L 6014825 intron PVRAP + chr3L 6014885 intron PVRAP + chr3L 6014945 intron PVRAP + chr3L_5_6010001 chr3L_6010001 RAL-911 917 chr3L 6064993 6065031 chr3L 6065090 6065128 7 97 4.5 4.0 4.2 1.3 135 chr3L 6064993 intergenic not near genes chr3L 6065060 intergenic not near genes chr3L 6065128 intergenic not near genes chr3L_7_6065001 chr3L_6065001 RAL-911 918 chr3L 6116684 6116710 chr3L 6116789 6116815 4 105 2.0 0.0 1.0 2.0 131 chr3L 6116684 intron Ets65A + chr3L 6116750 intron Ets65A + chr3L 6116815 intron Ets65A + chr3L_4_6115001 chr3L_6115001 RAL-911 919 chr3L 6119141 6119158 chr3L 6119250 6119267 5 108 3.0 3.0 3.0 1.2 126 chr3L 6119141 exon Ets65A + chr3L 6119204 intron Ets65A + chr3L 6119267 intron Ets65A + chr3L_5_6115001 chr3L_6115001 RAL-911 920 chr3L 6155698 6155713 chr3L 6155804 6155819 5 106 5.0 0.0 2.5 1.4 121 chr3L 6155698 intergenic CR45421 - chr3L 6155758 intergenic not near genes chr3L 6155819 intergenic not near genes chr3L_5_6155001 chr3L_6155001 RAL-911 921 chr3L 6185591 6185632 chr3L 6185688 6185730 11 93 7.5 4.0 5.8 1.6 139 chr3L 6185591 exon CG43293 + chr3L 6185660 intron CG43293 + chr3L 6185730 exon CG43293 + chr3L_11_6185001 chr3L_6185001 RAL-911 922 chr3L 6220903 6220946 chr3L 6230075 6230118 roo 5 9167 3.0 5.5 4.2 1.0 9215 chr3L 6220903 5` UTR pncr008:3L + chr3L 6225510 intergenic not near genes chr3L 6230118 intergenic not near genes chr3L_5_6225001 chr3L_6225001 RAL-911 923 chr3L 6278032 6278199 chr3L 6278129 6278295 6 94 6.5 3.5 5.0 1.0 263 chr3L 6278032 intergenic not near genes chr3L 6278164 intergenic not near genes chr3L 6278295 intergenic not near genes chr3L_6_6275001 chr3L_6275001 RAL-911 924 chr3L 6334989 6335036 chr3L 6335480 6335527 297 8 488 2.0 3.0 2.5 2.3 538 chr3L 6334989 intron CG13300 - chr3L 6335258 intron CG13300 - chr3L 6335527 intron CG13300 - chr3L_8_6335001 chr3L_6335001 RAL-911 925 chr3L 6405642 6405683 chr3L 6432126 6432167 roo 13 26483 4.0 5.5 4.8 2.2 26525 chr3L 6405642 intron CG42747 + chr3L 6418904 intron CG42747 + chr3L 6432167 intron CG42747 + chr3L_13_6415001 chr3L_6415001 RAL-911 926 chr3L 6454018 6454057 chr3L 6456493 6456532 8 2471 5.5 1.5 3.5 1.8 2514 chr3L 6454018 intron CG42747 + chr3L 6455275 intron CG42747 + chr3L 6456532 intron CG42747 + chr3L_8_6455001 chr3L_6455001 RAL-911 927 chr3L 6503384 6503419 chr3L 6503497 6503519 9 111 4.5 0.0 2.2 2.8 135 chr3L 6503384 intron sfl + chr3L 6503452 intron sfl + chr3L 6503519 intron sfl + chr3L_9_6500001 chr3L_6500001 RAL-911 928 chr3L 6619269 6619272 chr3L 6619439 6619455 4 179 5.0 1.5 3.2 1.0 186 chr3L 6619269 intergenic CG8398 + chr3L 6619362 intergenic CG8398 + chr3L 6619455 intergenic CG8398 + chr3L_4_6615001 chr3L_6615001 RAL-911 929 chr3L 6619279 6619294 chr3L 6619431 6619475 5 175 3.0 1.0 2.0 1.7 196 chr3L 6619279 intergenic CG8398 + chr3L 6619377 intergenic CG8398 + chr3L 6619475 intergenic CG8398 + chr3L_5_6615001 chr3L_6615001 RAL-911 930 chr3L 6621790 6621831 chr3L 6621907 6621948 9 115 5.5 1.0 3.2 2.1 158 chr3L 6621790 intergenic not near genes chr3L 6621869 intergenic not near genes chr3L 6621948 intergenic not near genes chr3L_9_6620001 chr3L_6620001 RAL-911 931 chr3L 6652061 6652106 chr3L 6652164 6652208 12 99 1.0 2.5 1.8 4.3 147 chr3L 6652061 intergenic not near genes chr3L 6652134 intergenic not near genes chr3L 6652208 intergenic not near genes chr3L_12_6650001 chr3L_6650001 RAL-911 932 chr3L 6754050 6754099 chr3L 6754158 6754207 13 106 3.5 3.5 3.5 2.9 157 chr3L 6754050 3` UTR CG10103 - chr3L 6754128 3` UTR CG10103 - chr3L 6754207 3` UTR CG10103 - chr3L_13_6750001 chr3L_6750001 RAL-911 933 chr3L 6781108 6781153 chr3L 6783141 6783183 Doc 10 2031 1.5 0.0 0.8 5.6 2075 chr3L 6781108 intergenic not near genes chr3L 6782146 intergenic not near genes chr3L 6783183 intergenic not near genes chr3L_10_6780001 chr3L_6780001 RAL-911 934 chr3L 6900892 6900905 chr3L 6900988 6901001 4 96 0.0 3.0 1.5 1.6 109 chr3L 6900892 intergenic not near genes chr3L 6900946 intergenic not near genes chr3L 6901001 intergenic not near genes chr3L_4_6900001 chr3L_6900001 RAL-911 935 chr3L 6907996 6908046 chr3L 6908101 6908144 5 102 3.5 0.0 1.8 1.8 148 chr3L 6907996 intergenic not near genes chr3L 6908070 intergenic not near genes chr3L 6908144 intergenic not near genes chr3L_5_6905001 chr3L_6905001 RAL-911 936 chr3L 6962197 6962241 chr3L 6962298 6962341 4 94 3.5 1.0 2.2 1.2 144 chr3L 6962197 intron sgl - chr3L 6962269 intron sgl - chr3L 6962341 intron sgl - chr3L_4_6960001 chr3L_6960001 RAL-911 937 chr3L 6974484 6974515 chr3L 6974605 6974611 4 110 1.0 3.0 2.0 1.3 127 chr3L 6974484 intron Galphai - chr3L 6974548 intron Galphai - chr3L 6974611 intron Galphai - chr3L_4_6970001 chr3L_6970001 RAL-911 938 chr3L 6986378 6986395 chr3L 6986584 6986632 4 221 0.0 1.0 0.5 2.7 254 chr3L 6986378 intergenic not near genes chr3L 6986505 intergenic not near genes chr3L 6986632 intergenic not near genes chr3L_4_6985001 chr3L_6985001 RAL-911 939 chr3L 7007368 7007389 chr3L 7007483 7007502 5 115 0.0 5.0 2.5 1.4 134 chr3L 7007368 intron Mp + chr3L 7007435 intron Mp + chr3L 7007502 intron Mp + chr3L_5_7005001 chr3L_7005001 RAL-911 940 chr3L 7090015 7090052 chr3L 7090116 7090138 12 97 5.0 5.0 5.0 2.0 123 chr3L 7090015 intergenic not near genes chr3L 7090076 intergenic not near genes chr3L 7090138 intergenic not near genes chr3L_12_7090001 chr3L_7090001 RAL-911 941 chr3L 7100411 7100466 chr3L 7100518 7100548 14 100 3.5 5.0 4.2 2.7 137 chr3L 7100411 intron form3 + chr3L 7100480 intron form3 + chr3L 7100548 intron form3 + chr3L_14_7100001 chr3L_7100001 RAL-911 942 chr3L 7112587 7112613 chr3L 7112670 7112720 7 99 4.0 2.5 3.2 1.7 133 chr3L 7112587 intron form3 + chr3L 7112654 intron form3 + chr3L 7112720 intron form3 + chr3L_7_7110001 chr3L_7110001 RAL-911 943 chr3L 7129934 7129981 chr3L 7130146 7130170 BS 18 211 3.5 3.0 3.2 4.3 236 chr3L 7129934 intergenic CG15829 + chr3L 7130052 intergenic CG15829 + chr3L 7130170 intergenic CG15829 + chr3L_18_7130001 chr3L_7130001 RAL-911 944 chr3L 7276188 7276240 chr3L 7276292 7276342 11 101 2.0 2.5 2.2 3.4 154 chr3L 7276188 intron unc-13-4A - chr3L 7276265 intron unc-13-4A - chr3L 7276342 intron unc-13-4A - chr3L_11_7275001 chr3L_7275001 RAL-911 945 chr3L 7285445 7285458 chr3L 7285543 7285554 4 98 3.5 1.0 2.2 1.2 109 chr3L 7285445 intron unc-13-4A - chr3L 7285500 intron unc-13-4A - chr3L 7285554 intron unc-13-4A - chr3L_4_7285001 chr3L_7285001 RAL-911 946 chr3L 7371179 7371209 chr3L 7371260 7371313 13 100 1.0 6.0 3.5 2.9 134 chr3L 7371179 intron akirin + chr3L 7371246 intron akirin + chr3L 7371313 intron akirin + chr3L_13_7370001 chr3L_7370001 RAL-911 947 chr3L 7375909 7375954 chr3L 7376005 7376038 4 92 5.5 4.0 4.8 0.7 129 chr3L 7375909 intron SMSr - chr3L 7375974 intron SMSr - chr3L 7376038 intron SMSr - chr3L_4_7375001 chr3L_7375001 RAL-911 948 chr3L 7377295 7377348 chr3L 7380420 7380473 297 15 3122 4.5 2.5 3.5 3.3 3178 chr3L 7377295 intron SMSr - chr3L 7378884 intron SMSr - chr3L 7380473 intron SMSr - chr3L_15_7375001 chr3L_7375001 RAL-911 949 chr3L 7439424 7439455 chr3L 7440882 7440888 4 1446 8.5 17.0 12.8 0.3 1464 chr3L 7439424 intron CG42458 + chr3L 7440156 intron,exon CG42458 +,sphinx2 - chr3L 7440888 intron CG42458 + chr3L_4_7440001 chr3L_7440001 RAL-911 950 chr3L 7444003 7444025 chr3L 7444121 7444143 9 117 3.0 0.0 1.5 3.6 140 chr3L 7444003 intron CG42458 + chr3L 7444073 intron CG42458 + chr3L 7444143 intron CG42458 + chr3L_9_7440001 chr3L_7440001 RAL-911 951 chr3L 7498746 7498779 chr3L 7503543 7503576 F-element 13 4795 5.5 10.5 8.0 1.4 4830 chr3L 7498746 5` UTR CG8539 - chr3L 7501161 intergenic not near genes chr3L 7503576 intergenic not near genes chr3L_13_7500001 chr3L_7500001 RAL-911 952 chr3L 7574843 7574858 chr3L 7574940 7574955 5 96 0.5 2.5 1.5 2.0 112 chr3L 7574843 intergenic not near genes chr3L 7574899 intergenic not near genes chr3L 7574955 intergenic not near genes chr3L_5_7570001 chr3L_7570001 RAL-911 953 chr3L 7581613 7581648 chr3L 7581710 7581746 7 102 0.5 2.0 1.2 3.2 133 chr3L 7581613 intergenic not near genes chr3L 7581680 intergenic not near genes chr3L 7581746 intergenic not near genes chr3L_7_7580001 chr3L_7580001 RAL-911 954 chr3L 7793713 7793739 chr3L 7800785 7800811 297 9 7070 3.5 8.5 6.0 1.3 7098 chr3L 7793713 intron CG32369 - chr3L 7797262 intron CG32369 - chr3L 7800811 intron CG32369 - chr3L_9_7795001 chr3L_7795001 RAL-911 955 chr3L 7876093 7876128 chr3L 7876192 7876227 8 98 0.0 0.0 0.0 8.0 134 chr3L 7876093 intron CG32365 + chr3L 7876160 intron CG32365 + chr3L 7876227 intron CG32365 + chr3L_8_7875001 chr3L_7875001 RAL-911 956 chr3L 7886518 7886544 chr3L 7889050 7889082 Stalker4 9 2537 1.5 3.5 2.5 2.6 2564 chr3L 7886518 intron CG32365 + chr3L 7887800 intron CG32365 + chr3L 7889082 intron CG32365 + chr3L_9_7885001 chr3L_7885001 RAL-911 957 chr3L 7916811 7916856 chr3L 7926002 7926047 roo 14 9188 5.0 2.5 3.8 2.9 9236 chr3L 7916811 3` UTR syd - chr3L 7921429 intron syd - chr3L 7926047 3` UTR syd - chr3L_14_7920001 chr3L_7920001 RAL-911 958 chr3L 7969031 7969052 chr3L 7969111 7969152 8 91 3.0 6.5 4.8 1.4 121 chr3L 7969031 intergenic not near genes chr3L 7969092 intergenic not near genes chr3L 7969152 intergenic not near genes chr3L_8_7965001 chr3L_7965001 RAL-911 959 chr3L 7985353 7985395 chr3L 7987704 7987744 NOF 7 2346 3.0 6.5 4.8 1.2 2391 chr3L 7985353 intron nmo + chr3L 7986548 intron nmo + chr3L 7987744 intron nmo + chr3L_7_7985001 chr3L_7985001 RAL-911 960 chr3L 8019679 8019732 chr3L 8024113 8024164 NOF 8 4433 1.5 0.0 0.8 4.4 4485 chr3L 8019679 intron nmo + chr3L 8021922 intron nmo + chr3L 8024164 intron nmo + chr3L_8_8020001 chr3L_8020001 RAL-911 961 chr3L 8025014 8025044 chr3L 8025112 8025113 5 92 8.0 0.5 4.2 1.0 99 chr3L 8025014 intron nmo + chr3L 8025064 intron nmo + chr3L 8025113 intron nmo + chr3L_5_8025001 chr3L_8025001 RAL-911 962 chr3L 8064604 8064629 chr3L 8064838 8064865 4 235 0.0 1.0 0.5 2.7 261 chr3L 8064604 intron Ect4 + chr3L 8064734 intron Ect4 + chr3L 8064865 intron Ect4 + chr3L_4_8060001 chr3L_8060001 RAL-911 963 chr3L 8178509 8178519 chr3L 8178606 8178616 5 97 1.0 0.0 0.5 3.3 107 chr3L 8178509 intergenic Nmt -,mthl7 - chr3L 8178562 intergenic mthl7 -,Nmt - chr3L 8178616 intergenic mthl7 -,Nmt - chr3L_5_8175001 chr3L_8175001 RAL-911 964 chr3L 8204436 8204453 chr3L 8204570 8204600 5 138 4.5 0.5 2.5 1.4 164 chr3L 8204436 intergenic not near genes chr3L 8204518 intergenic not near genes chr3L 8204600 intergenic not near genes chr3L_5_8200001 chr3L_8200001 RAL-911 965 chr3L 8258000 8258010 chr3L 8258149 8258171 4 158 2.0 2.0 2.0 1.3 171 chr3L 8258000 intron Dscam4 + chr3L 8258086 intron Dscam4 + chr3L 8258171 intron Dscam4 + chr3L_4_8255001 chr3L_8255001 RAL-911 966 chr3L 8290003 8290051 chr3L 8290156 8290205 7 153 24.5 29.0 26.8 0.3 202 chr3L 8290003 intergenic cert -,CG7201 - chr3L 8290104 intergenic CG7201 -,cert - chr3L 8290205 intergenic CG7201 -,cert - chr3L_7_8290001 chr3L_8290001 RAL-911 967 chr3L 8317596 8317596 chr3L 22908066 22908067 4 14590470 0.0 22.0 11.0 0.3 14590471 chr3L 8317596 intergenic not near genes chr3L 15612832 intergenic CG13449 -,comm3 - chr3L 22908067 intergenic not near genes chr3L_4_15610001 chr3L_15610001 RAL-911 968 chr3L 8375765 8375810 chr3L 8375939 8375984 7 174 5.0 3.5 4.2 1.3 219 chr3L 8375765 intron ImpE1 + chr3L 8375874 intron ImpE1 + chr3L 8375984 intron ImpE1 + chr3L_7_8375001 chr3L_8375001 RAL-911 969 chr3L 8498309 8498325 chr3L 8505796 8505812 blood 4 7486 0.0 7.0 3.5 0.9 7503 chr3L 8498309 intron CG43163 - chr3L 8502060 intron CG43163 - chr3L 8505812 intron CG43163 - chr3L_4_8500001 chr3L_8500001 RAL-911 970 chr3L 8619492 8619546 chr3L 8619601 8619649 14 106 2.0 4.0 3.0 3.5 157 chr3L 8619492 intergenic S-Lap1 +,S-Lap2 + chr3L 8619570 intergenic S-Lap1 +,S-Lap2 + chr3L 8619649 intergenic S-Lap1 +,S-Lap2 + chr3L_14_8615001 chr3L_8615001 RAL-911 971 chr3L 8770825 8770845 chr3L 8771161 8771181 8 336 1.5 5.5 3.5 1.8 356 chr3L 8770825 intron Fhos + chr3L 8771003 intron Fhos + chr3L 8771181 intron Fhos + chr3L_8_8770001 chr3L_8770001 RAL-911 972 chr3L 8849211 8849223 chr3L 8849290 8849323 6 91 5.0 3.0 4.0 1.2 112 chr3L 8849211 intron dally + chr3L 8849267 intron dally + chr3L 8849323 intron dally + chr3L_6_8845001 chr3L_8845001 RAL-911 973 chr3L 8849225 8849236 chr3L 8849289 8849325 4 86 3.0 2.0 2.5 1.1 100 chr3L 8849225 intron dally + chr3L 8849275 intron dally + chr3L 8849325 intron dally + chr3L_4_8845001 chr3L_8845001 RAL-911 974 chr3L 8884418 8884420 chr3L 8884607 8884639 5 205 2.5 0.0 1.2 2.3 221 chr3L 8884418 intron dally + chr3L 8884528 intron dally + chr3L 8884639 intron dally + chr3L_5_8880001 chr3L_8880001 RAL-911 975 chr3L 8928251 8928296 chr3L 8928347 8928392 9 96 6.0 0.5 3.2 2.1 141 chr3L 8928251 intron Tsp66E + chr3L 8928322 intron Tsp66E + chr3L 8928392 intron Tsp66E + chr3L_9_8925001 chr3L_8925001 RAL-911 976 chr3L 8950540 8950561 chr3L 8950642 8950650 5 106 6.0 3.5 4.8 0.9 110 chr3L 8950540 intron,intron CG43783 -,orb2 - chr3L 8950595 intron,intron CG43783 -,orb2 - chr3L 8950650 intron,intron CG43783 -,orb2 - chr3L_5_8950001 chr3L_8950001 RAL-911 977 chr3L 9003952 9003974 chr3L 9004032 9004079 7 97 0.5 5.0 2.8 1.8 127 chr3L 9003952 intergenic not near genes chr3L 9004016 intergenic not near genes chr3L 9004079 intergenic not near genes chr3L_7_9000001 chr3L_9000001 RAL-911 978 chr3L 9009939 9009970 chr3L 9010063 9010094 9 123 1.5 2.0 1.8 3.2 155 chr3L 9009939 intergenic CG5194 - chr3L 9010016 intergenic CG5194 - chr3L 9010094 intergenic CG5194 - chr3L_9_9010001 chr3L_9010001 RAL-911 979 chr3L 9024490 9024537 chr3L 9024590 9024637 5 99 2.0 2.0 2.0 1.7 147 chr3L 9024490 intergenic not near genes chr3L 9024564 intergenic not near genes chr3L 9024637 intergenic not near genes chr3L_5_9020001 chr3L_9020001 RAL-911 980 chr3L 9047071 9047078 chr3L 9047178 9047185 4 107 1.5 0.0 0.8 2.2 114 chr3L 9047071 intergenic CG5144 + chr3L 9047128 intergenic CG5144 + chr3L 9047185 intergenic CG5144 + chr3L_4_9045001 chr3L_9045001 RAL-911 981 chr3L 9076927 9076953 chr3L 9084495 9084531 412 4 7567 2.0 0.5 1.2 1.8 7604 chr3L 9076927 exon Tequila + chr3L 9080729 intron Tequila + chr3L 9084531 exon Tequila + chr3L_4_9080001 chr3L_9080001 RAL-911 982 chr3L 9164688 9164716 chr3L 9166163 9166197 hobo 9 1480 1.0 0.0 0.5 6.0 1509 chr3L 9164688 intron Rdl - chr3L 9165442 intron Rdl - chr3L 9166197 intron Rdl - chr3L_9_9165001 chr3L_9165001 RAL-911 983 chr3L 9219223 9219278 chr3L 9219915 9219927 jockey 5 668 2.5 3.0 2.8 1.3 704 chr3L 9219223 intergenic not near genes chr3L 9219575 intergenic not near genes chr3L 9219927 intergenic not near genes chr3L_5_9215001 chr3L_9215001 RAL-911 984 chr3L 9270615 9270645 chr3L 9278375 9278380 roo 4 7758 1.5 1.0 1.2 1.8 7765 chr3L 9270615 intron GluRIB + chr3L 9274498 intron GluRIB + chr3L 9278380 intron GluRIB + chr3L_4_9270001 chr3L_9270001 RAL-911 985 chr3L 9421506 9421555 chr3L 9421614 9421619 4 84 1.5 2.0 1.8 1.4 113 chr3L 9421506 intron CG3967 - chr3L 9421562 intron CG3967 - chr3L 9421619 intron CG3967 - chr3L_4_9420001 chr3L_9420001 RAL-911 986 chr3L 9443507 9443529 chr3L 9445305 9445312 S-element 6 1803 4.5 4.0 4.2 1.2 1805 chr3L 9443507 intron CG33926 + chr3L 9444410 intron CG33926 + chr3L 9445312 intron CG33926 + chr3L_6_9440001 chr3L_9440001 RAL-911 987 chr3L 9501688 9501699 chr3L 9502194 9502205 roo 6 506 2.0 4.5 3.2 1.4 517 chr3L 9501688 intron path - chr3L 9501946 intron path - chr3L 9502205 intron path - chr3L_6_9500001 chr3L_9500001 RAL-911 988 chr3L 9501700 9501731 chr3L 9502188 9502235 roo 11 502 1.0 4.0 2.5 3.1 535 chr3L 9501700 intron path - chr3L 9501968 intron path - chr3L 9502235 intron path - chr3L_11_9500001 chr3L_9500001 RAL-911 989 chr3L 9559386 9559411 chr3L 9559539 9559566 6 152 1.0 6.0 3.5 1.3 180 chr3L 9559386 intron CG42673 + chr3L 9559476 intron CG42673 + chr3L 9559566 intron CG42673 + chr3L_6_9555001 chr3L_9555001 RAL-911 990 chr3L 9571895 9571905 chr3L 9572256 9572273 jockey 5 366 6.5 0.0 3.2 1.2 378 chr3L 9571895 intron CG42673 + chr3L 9572084 intron CG42673 + chr3L 9572273 intron CG42673 + chr3L_5_9570001 chr3L_9570001 RAL-911 991 chr3L 9575898 9575940 chr3L 9580993 9581027 jockey 7 5097 1.5 3.0 2.2 2.2 5129 chr3L 9575898 intron CG42673 + chr3L 9578462 intron CG42673 + chr3L 9581027 intron CG42673 + chr3L_7_9575001 chr3L_9575001 RAL-911 992 chr3L 9629716 9629766 chr3L 9629811 9629862 12 95 3.5 4.5 4.0 2.4 146 chr3L 9629716 intron CG8336 + chr3L 9629789 intron CG8336 + chr3L 9629862 intron CG8336 + chr3L_12_9625001 chr3L_9625001 RAL-911 993 chr3L 9637832 9637886 chr3L 9637934 9637987 16 97 2.5 1.5 2.0 5.3 155 chr3L 9637832 exon fry - chr3L 9637910 intron fry - chr3L 9637987 intron fry - chr3L_16_9635001 chr3L_9635001 RAL-911 994 chr3L 9639051 9639062 chr3L 9639156 9639162 4 102 0.0 5.5 2.8 1.1 111 chr3L 9639051 intron fry - chr3L 9639106 intron fry - chr3L 9639162 intron fry - chr3L_4_9635001 chr3L_9635001 RAL-911 995 chr3L 9646452 9646499 chr3L 9646597 9646644 7 139 5.5 0.0 2.8 1.8 192 chr3L 9646452 intron,intron fry -,CG33696 + chr3L 9646548 intron,intron fry -,CG33696 + chr3L 9646644 intron,intron fry -,CG33696 + chr3L_7_9645001 chr3L_9645001 RAL-911 996 chr3L 9715595 9715626 chr3L 9715685 9715722 12 95 1.0 1.0 1.0 6.0 127 chr3L 9715595 intron vsg + chr3L 9715658 intron vsg + chr3L 9715722 intron vsg + chr3L_12_9715001 chr3L_9715001 RAL-911 997 chr3L 9817630 9817659 chr3L 9817730 9817759 11 98 2.0 9.5 5.8 1.6 129 chr3L 9817630 intron CG43897 + chr3L 9817694 intron CG43897 + chr3L 9817759 intron CG43897 + chr3L_11_9815001 chr3L_9815001 RAL-911 998 chr3L 9831718 9831736 chr3L 9831819 9831838 5 101 0.0 6.0 3.0 1.2 120 chr3L 9831718 intron CG43897 + chr3L 9831778 intron CG43897 + chr3L 9831838 intron CG43897 + chr3L_5_9830001 chr3L_9830001 RAL-911 999 chr3L 9929675 9929686 chr3L 9938460 9938487 roo 4 8796 4.0 5.5 4.8 0.7 8812 chr3L 9929675 intron CG34356 + chr3L 9934081 intron CG34356 + chr3L 9938487 intron CG34356 + chr3L_4_9930001 chr3L_9930001 RAL-911 1000 chr3L 10003144 10003160 chr3L 10003261 10003275 5 116 4.0 3.5 3.8 1.0 131 chr3L 10003144 intron dpr6 + chr3L 10003210 intron dpr6 + chr3L 10003275 intron dpr6 + chr3L_5_10000001 chr3L_10000001 RAL-911 1001 chr3L 10003163 10003178 chr3L 10003255 10003295 5 112 1.5 2.0 1.8 1.8 132 chr3L 10003163 intron dpr6 + chr3L 10003229 intron dpr6 + chr3L 10003295 intron dpr6 + chr3L_5_10000001 chr3L_10000001 RAL-911 1002 chr3L 10169640 10169660 chr3L 10169770 10169790 8 130 5.0 6.0 5.5 1.2 150 chr3L 10169640 intron dpr10 - chr3L 10169715 intron dpr10 - chr3L 10169790 intron dpr10 - chr3L_8_10165001 chr3L_10165001 RAL-911 1003 chr3L 10186663 10186675 chr3L 10186772 10186778 4 106 4.5 0.0 2.2 1.2 115 chr3L 10186663 intergenic not near genes chr3L 10186720 intergenic not near genes chr3L 10186778 intergenic not near genes chr3L_4_10185001 chr3L_10185001 RAL-911 1004 chr3L 10219216 10219260 chr3L 10219333 10219377 7 116 3.5 2.5 3.0 1.8 161 chr3L 10219216 exon CG32055 - chr3L 10219296 exon CG32055 - chr3L 10219377 exon CG32055 - chr3L_7_10215001 chr3L_10215001 RAL-911 1005 chr3L 10248946 10249126 chr3L 10249044 10249208 10 95 0.0 0.0 0.0 10.0 262 chr3L 10248946 intergenic CR44540 - chr3L 10249077 intergenic CR44540 - chr3L 10249208 intergenic not near genes chr3L_10_10245001 chr3L_10245001 RAL-911 1006 chr3L 10298654 10298691 chr3L 10298761 10298798 10 104 0.0 2.0 1.0 5.0 144 chr3L 10298654 intergenic not near genes chr3L 10298726 intergenic not near genes chr3L 10298798 intergenic not near genes chr3L_10_10295001 chr3L_10295001 RAL-911 1007 chr3L 10328096 10328126 chr3L 10328228 10328255 7 130 6.5 5.0 5.8 1.0 159 chr3L 10328096 intergenic not near genes chr3L 10328176 intergenic not near genes chr3L 10328255 intergenic not near genes chr3L_7_10325001 chr3L_10325001 RAL-911 1008 chr3L 10348632 10348670 chr3L 10348769 10348807 11 136 1.0 0.0 0.5 7.3 175 chr3L 10348632 intron CR44327 + chr3L 10348720 intron CR44327 + chr3L 10348807 intron CR44327 + chr3L_11_10345001 chr3L_10345001 RAL-911 1009 chr3L 10386381 10386417 chr3L 10386473 10386514 7 91 5.0 3.0 4.0 1.4 133 chr3L 10386381 intergenic CR45245 + chr3L 10386448 intergenic CR45245 + chr3L 10386514 5` UTR CR45245 + chr3L_7_10385001 chr3L_10385001 RAL-911 1010 chr3L 10414938 10414978 chr3L 10417319 10417370 Doc 7 2380 0.0 5.5 2.8 1.8 2432 chr3L 10414938 intergenic CG12362 + chr3L 10416154 intergenic not near genes chr3L 10417370 intergenic not near genes chr3L_7_10415001 chr3L_10415001 RAL-911 1011 chr3L 10420460 10420507 chr3L 10420612 10420658 10 152 2.0 0.0 1.0 5.0 198 chr3L 10420460 intergenic not near genes chr3L 10420559 intergenic not near genes chr3L 10420658 intergenic not near genes chr3L_10_10420001 chr3L_10420001 RAL-911 1012 chr3L 10430055 10430101 chr3L 10430152 10430198 9 96 2.0 4.5 3.2 2.1 143 chr3L 10430055 3` UTR Ir67b - chr3L 10430126 3` UTR Ir67b - chr3L 10430198 3` UTR Ir67b - chr3L_9_10430001 chr3L_10430001 RAL-911 1013 chr3L 10455989 10456031 chr3L 10456202 10456237 6 211 3.0 2.0 2.5 1.7 248 chr3L 10455989 intergenic not near genes chr3L 10456113 intergenic not near genes chr3L 10456237 intergenic not near genes chr3L_6_10455001 chr3L_10455001 RAL-911 1014 chr3L 10456721 10456766 chr3L 10456832 10456877 10 111 1.5 0.5 1.0 5.0 156 chr3L 10456721 intergenic not near genes chr3L 10456799 intergenic not near genes chr3L 10456877 intergenic not near genes chr3L_10_10455001 chr3L_10455001 RAL-911 1015 chr3L 10469919 10469964 chr3L 10470010 10470060 7 95 3.5 1.0 2.2 2.2 141 chr3L 10469919 intergenic not near genes chr3L 10469990 intergenic not near genes chr3L 10470060 intergenic not near genes chr3L_7_10465001 chr3L_10465001 RAL-911 1016 chr3L 10509479 10509509 chr3L 10509612 10509635 4 135 1.5 1.0 1.2 1.8 156 chr3L 10509479 intron A2bp1 + chr3L 10509557 intron A2bp1 + chr3L 10509635 intron A2bp1 + chr3L_4_10505001 chr3L_10505001 RAL-911 1017 chr3L 10514304 10514334 chr3L 10514398 10514431 7 97 0.0 3.5 1.8 2.5 127 chr3L 10514304 intron A2bp1 + chr3L 10514368 intron A2bp1 + chr3L 10514431 intron A2bp1 + chr3L_7_10510001 chr3L_10510001 RAL-911 1018 chr3L 10524595 10524629 chr3L 10524956 10524993 10 364 6.0 1.5 3.8 2.1 398 chr3L 10524595 intron A2bp1 + chr3L 10524794 intron A2bp1 + chr3L 10524993 intron A2bp1 + chr3L_10_10520001 chr3L_10520001 RAL-911 1019 chr3L 10551562 10551600 chr3L 10551674 10551715 7 112 0.0 0.5 0.2 5.8 153 chr3L 10551562 intron A2bp1 + chr3L 10551638 intron A2bp1 + chr3L 10551715 intron A2bp1 + chr3L_7_10550001 chr3L_10550001 RAL-911 1020 chr3L 10584263 10584299 chr3L 10584368 10584406 10 104 2.5 7.5 5.0 1.7 143 chr3L 10584263 intron A2bp1 + chr3L 10584334 intron A2bp1 + chr3L 10584406 intron A2bp1 + chr3L_10_10580001 chr3L_10580001 RAL-911 1021 chr3L 10613160 10613195 chr3L 10613475 10613510 6 310 1.0 2.5 1.8 2.1 350 chr3L 10613160 intergenic not near genes chr3L 10613335 intergenic not near genes chr3L 10613510 intergenic not near genes chr3L_6_10610001 chr3L_10610001 RAL-911 1022 chr3L 10621846 10621874 chr3L 10621950 10621979 9 105 1.0 4.0 2.5 2.6 133 chr3L 10621846 intergenic not near genes chr3L 10621912 intergenic not near genes chr3L 10621979 intergenic not near genes chr3L_9_10620001 chr3L_10620001 RAL-911 1023 chr3L 10658056 10658210 chr3L 10658153 10658357 29 109 0.5 0.5 0.5 19.3 301 chr3L 10658056 intron CG32066 - chr3L 10658206 intron CG32066 - chr3L 10658357 intron CG32066 - chr3L_29_10655001 chr3L_10655001 RAL-911 1024 chr3L 10700176 10700192 chr3L 10700277 10700293 9 101 6.0 3.5 4.8 1.6 117 chr3L 10700176 intergenic not near genes chr3L 10700234 intergenic not near genes chr3L 10700293 intergenic not near genes chr3L_9_10700001 chr3L_10700001 RAL-911 1025 chr3L 10729784 10729817 chr3L 10729882 10729915 11 98 6.0 0.0 3.0 2.8 131 chr3L 10729784 intergenic not near genes chr3L 10729850 intergenic not near genes chr3L 10729915 intergenic not near genes chr3L_11_10725001 chr3L_10725001 RAL-911 1026 chr3L 10870828 10870872 chr3L 10870935 10870981 6 96 1.0 3.5 2.2 1.9 153 chr3L 10870828 exon tna + chr3L 10870904 intron tna + chr3L 10870981 intron tna + chr3L_6_10870001 chr3L_10870001 RAL-911 1027 chr3L 10887363 10887370 chr3L 10887462 10887469 5 99 0.0 9.0 4.5 0.9 106 chr3L 10887363 intergenic not near genes chr3L 10887416 intergenic not near genes chr3L 10887469 intergenic not near genes chr3L_5_10885001 chr3L_10885001 RAL-911 1028 chr3L 10956429 10956466 chr3L 10956567 10956590 6 136 3.5 2.5 3.0 1.5 161 chr3L 10956429 intergenic not near genes chr3L 10956510 intergenic not near genes chr3L 10956590 intergenic not near genes chr3L_6_10955001 chr3L_10955001 RAL-911 1029 chr3L 11127907 11127960 chr3L 11128027 11128062 13 116 0.5 3.5 2.0 4.3 155 chr3L 11127907 intron CG42575 + chr3L 11127984 intron CG42575 + chr3L 11128062 intron CG42575 + chr3L_13_11125001 chr3L_11125001 RAL-911 1030 chr3L 11135512 11135806 chr3L 11135762 11135911 14 186 0.0 0.5 0.2 11.7 399 chr3L 11135512 intergenic CG14143 + chr3L 11135712 intergenic CG14143 +,CG32082 + chr3L 11135911 intergenic CG32082 +,CG14143 + chr3L_14_11135001 chr3L_11135001 RAL-911 1031 chr3L 11217490 11217536 chr3L 11217593 11217613 9 96 2.5 1.5 2.0 3.0 123 chr3L 11217490 intron CG42671 + chr3L 11217552 intron CG42671 + chr3L 11217613 intron CG42671 + chr3L_9_11215001 chr3L_11215001 RAL-911 1032 chr3L 11241774 11241785 chr3L 11241876 11241884 4 101 0.0 1.5 0.8 2.2 110 chr3L 11241774 intergenic not near genes chr3L 11241829 intergenic not near genes chr3L 11241884 intergenic not near genes chr3L_4_11240001 chr3L_11240001 RAL-911 1033 chr3L 11264456 11264491 chr3L 11271428 11271463 17.6 8 6970 2.0 5.5 3.8 1.7 7007 chr3L 11264456 intergenic not near genes chr3L 11267960 intergenic not near genes chr3L 11271463 intergenic not near genes chr3L_8_11265001 chr3L_11265001 RAL-911 1034 chr3L 11471562 11471612 chr3L 11471660 11471709 8 98 3.5 2.5 3.0 2.0 147 chr3L 11471562 intergenic not near genes chr3L 11471636 intergenic not near genes chr3L 11471709 intergenic not near genes chr3L_8_11470001 chr3L_11470001 RAL-911 1035 chr3L 11564793 11564814 chr3L 11572408 11572412 412 5 7607 1.0 0.0 0.5 3.3 7619 chr3L 11564793 exon CG33267 + chr3L 11568602 intron CG33267 + chr3L 11572412 exon CG33267 + chr3L_5_11565001 chr3L_11565001 RAL-911 1036 chr3L 11579545 11579574 chr3L 11579671 11579700 10 124 4.5 5.0 4.8 1.7 155 chr3L 11579545 intergenic CG43390 - chr3L 11579622 intergenic CG43390 - chr3L 11579700 intergenic CG43390 - chr3L_10_11575001 chr3L_11575001 RAL-911 1037 chr3L 11579576 11579583 chr3L 11579663 11579709 4 116 3.0 3.5 3.2 1.0 133 chr3L 11579576 intergenic CG43390 - chr3L 11579642 intergenic CG43390 - chr3L 11579709 intergenic CG43390 - chr3L_4_11575001 chr3L_11575001 RAL-911 1038 chr3L 11587899 11587954 chr3L 11587995 11588049 6 94 2.0 1.0 1.5 2.4 150 chr3L 11587899 intergenic rt - chr3L 11587974 intergenic rt - chr3L 11588049 intergenic rt - chr3L_6_11585001 chr3L_11585001 RAL-911 1039 chr3L 11588722 11588742 chr3L 11588894 11588918 6 174 4.0 4.5 4.2 1.2 196 chr3L 11588722 intergenic not near genes chr3L 11588820 intergenic not near genes chr3L 11588918 intergenic not near genes chr3L_6_11585001 chr3L_11585001 RAL-911 1040 chr3L 11590249 11590270 chr3L 11590358 11590380 9 110 4.0 2.0 3.0 2.2 131 chr3L 11590249 intergenic CG7377 + chr3L 11590314 intergenic CG7377 + chr3L 11590380 intergenic CG7377 +,CG33268 - chr3L_9_11590001 chr3L_11590001 RAL-911 1041 chr3L 11648495 11648508 chr3L 11648598 11648611 5 103 6.5 0.0 3.2 1.2 116 chr3L 11648495 intergenic RIOK1 -,CG7339 + chr3L 11648553 intergenic RIOK1 -,CG7339 + chr3L 11648611 intergenic RIOK1 -,CG7339 + chr3L_5_11645001 chr3L_11645001 RAL-911 1042 chr3L 11678075 11678117 chr3L 11678182 11678224 10 106 4.0 2.0 3.0 2.5 149 chr3L 11678075 intron CG32085 - chr3L 11678150 intron CG32085 - chr3L 11678224 intron CG32085 - chr3L_10_11675001 chr3L_11675001 RAL-911 1043 chr3L 11723069 11723115 chr3L 11727882 11727931 Doc 13 4814 2.5 4.0 3.2 3.1 4862 chr3L 11723069 3` UTR Bmcp + chr3L 11725500 intron Bmcp + chr3L 11727931 3` UTR Bmcp + chr3L_13_11725001 chr3L_11725001 RAL-911 1044 chr3L 11739846 11739894 chr3L 11739970 11740016 16 123 30.0 28.5 29.2 0.5 170 chr3L 11739846 intron CG6024 - chr3L 11739931 intron CG6024 - chr3L 11740016 intron CG6024 - chr3L_16_11735001 chr3L_11735001 RAL-911 1045 chr3L 11744007 11744043 chr3L 11744124 11744138 10 111 0.5 0.5 0.5 6.7 131 chr3L 11744007 exon CG6024 - chr3L 11744072 intron CG6024 - chr3L 11744138 intron CG6024 - chr3L_10_11740001 chr3L_11740001 RAL-911 1046 chr3L 11846401 11846417 chr3L 11846529 11846545 6 128 0.0 2.5 1.2 2.7 144 chr3L 11846401 intergenic not near genes chr3L 11846473 intergenic not near genes chr3L 11846545 intergenic not near genes chr3L_6_11845001 chr3L_11845001 RAL-911 1047 chr3L 11849334 11849355 chr3L 11849438 11849466 6 116 2.0 1.5 1.8 2.1 132 chr3L 11849334 intergenic not near genes chr3L 11849400 intergenic not near genes chr3L 11849466 intergenic not near genes chr3L_6_11845001 chr3L_11845001 RAL-911 1048 chr3L 11864575 11864580 chr3L 11865853 11865864 pogo 4 1288 0.5 3.0 1.8 1.4 1289 chr3L 11864575 intron CG44837 - chr3L 11865220 intron CG44837 - chr3L 11865864 intron CG44837 - chr3L_4_11865001 chr3L_11865001 RAL-911 1049 chr3L 11887238 11887255 chr3L 11887355 11887370 4 113 6.0 0.0 3.0 1.0 132 chr3L 11887238 intron CG44837 - chr3L 11887304 intron,3` UTR CG44837 -,CG5897 - chr3L 11887370 intron,3` UTR CG44837 -,CG5897 - chr3L_4_11885001 chr3L_11885001 RAL-911 1050 chr3L 12013894 12013940 chr3L 12014004 12014038 7 107 4.0 0.5 2.2 2.2 144 chr3L 12013894 intron rols - chr3L 12013966 intron rols - chr3L 12014038 intron rols - chr3L_7_12010001 chr3L_12010001 RAL-911 1051 chr3L 12089067 12089111 chr3L 12089166 12089211 13 99 3.0 1.0 2.0 4.3 144 chr3L 12089067 exon CG17154 + chr3L 12089139 3` UTR CG17154 + chr3L 12089211 3` UTR CG17154 + chr3L_13_12085001 chr3L_12085001 RAL-911 1052 chr3L 12092380 12092409 chr3L 12092477 12092503 6 96 2.0 3.5 2.8 1.6 123 chr3L 12092380 intergenic not near genes chr3L 12092442 intergenic not near genes chr3L 12092503 intergenic not near genes chr3L_6_12090001 chr3L_12090001 RAL-911 1053 chr3L 12204368 12204417 chr3L 12204478 12204528 23 111 3.0 3.0 3.0 5.8 160 chr3L 12204368 3` UTR CG5626 - chr3L 12204448 intron CG5626 - chr3L 12204528 intron CG5626 - chr3L_23_12200001 chr3L_12200001 RAL-911 1054 chr3L 12225169 12225214 chr3L 12225286 12225330 6 116 2.5 0.0 1.2 2.7 161 chr3L 12225169 intron app - chr3L 12225250 intron app - chr3L 12225330 intron app - chr3L_6_12225001 chr3L_12225001 RAL-911 1055 chr3L 12304073 12304114 chr3L 12304169 12304172 4 84 1.5 5.0 3.2 1.0 99 chr3L 12304073 intergenic not near genes chr3L 12304122 intergenic not near genes chr3L 12304172 intergenic not near genes chr3L_4_12300001 chr3L_12300001 RAL-911 1056 chr3L 12358445 12358477 chr3L 12359908 12359940 9 1459 1.5 3.5 2.5 2.6 1495 chr3L 12358445 intergenic not near genes chr3L 12359192 intergenic not near genes chr3L 12359940 intergenic not near genes chr3L_9_12355001 chr3L_12355001 RAL-911 1057 chr3L 12388054 12388096 chr3L 12388158 12388200 17 102 2.5 7.5 5.0 2.8 146 chr3L 12388054 intron Ncc69 - chr3L 12388127 intron Ncc69 - chr3L 12388200 intron Ncc69 - chr3L_17_12385001 chr3L_12385001 RAL-911 1058 chr3L 12411029 12411065 chr3L 12411159 12411195 7 128 1.5 4.5 3.0 1.8 166 chr3L 12411029 intron CG32103 - chr3L 12411112 intron CG32103 - chr3L 12411195 intron CG32103 - chr3L_7_12410001 chr3L_12410001 RAL-911 1059 chr3L 12460316 12460344 chr3L 12460413 12460441 6 96 0.0 4.5 2.2 1.9 125 chr3L 12460316 intergenic not near genes chr3L 12460378 intergenic not near genes chr3L 12460441 intergenic not near genes chr3L_6_12460001 chr3L_12460001 RAL-911 1060 chr3L 12578050 12578069 chr3L 12578157 12578177 5 108 0.5 0.0 0.2 4.2 127 chr3L 12578050 intergenic not near genes chr3L 12578114 intergenic not near genes chr3L 12578177 intergenic not near genes chr3L_5_12575001 chr3L_12575001 RAL-911 1061 chr3L 12587337 12587372 chr3L 12587440 12587475 6 103 0.0 0.0 0.0 6.0 138 chr3L 12587337 intron ara + chr3L 12587406 intron ara + chr3L 12587475 intron ara + chr3L_6_12585001 chr3L_12585001 RAL-911 1062 chr3L 12610976 12611025 chr3L 12611242 12611291 12 265 1.0 3.0 2.0 4.0 315 chr3L 12610976 intron caup + chr3L 12611134 intron caup + chr3L 12611291 intron caup + chr3L_12_12610001 chr3L_12610001 RAL-911 1063 chr3L 12626136 12626166 chr3L 12626265 12626295 8 129 0.5 1.5 1.0 4.0 159 chr3L 12626136 intergenic not near genes chr3L 12626216 intergenic not near genes chr3L 12626295 intergenic not near genes chr3L_8_12625001 chr3L_12625001 RAL-911 1064 chr3L 12654364 12654412 chr3L 12654464 12654503 7 92 3.0 2.5 2.8 1.8 139 chr3L 12654364 intergenic not near genes chr3L 12654434 intergenic not near genes chr3L 12654503 intergenic not near genes chr3L_7_12650001 chr3L_12650001 RAL-911 1065 chr3L 12720324 12720354 chr3L 12720422 12720459 9 103 3.0 4.5 3.8 1.9 135 chr3L 12720324 intergenic not near genes chr3L 12720392 intergenic not near genes chr3L 12720459 intergenic not near genes chr3L_9_12720001 chr3L_12720001 RAL-911 1066 chr3L 12808645 12808687 chr3L 12808740 12808750 12 89 4.0 6.5 5.2 1.9 105 chr3L 12808645 intron Sap130 + chr3L 12808698 intron Sap130 + chr3L 12808750 intron,5` UTR Sap130 +,CG32110 + chr3L_12_12805001 chr3L_12805001 RAL-911 1067 chr3L 12874912 12874963 chr3L 12877224 12877275 jockey 14 2308 3.0 7.0 5.0 2.3 2363 chr3L 12874912 intergenic not near genes chr3L 12876094 intergenic not near genes chr3L 12877275 intergenic not near genes chr3L_14_12875001 chr3L_12875001 RAL-911 1068 chr3L 12955111 12955157 chr3L 12955207 12955233 11 92 6.0 1.5 3.8 2.3 122 chr3L 12955111 intergenic CG10752 - chr3L 12955172 intergenic not near genes chr3L 12955233 intergenic not near genes chr3L_11_12955001 chr3L_12955001 RAL-911 1069 chr3L 12957778 12957816 chr3L 12962270 12962318 copia 6 4494 3.0 4.5 3.8 1.2 4540 chr3L 12957778 intergenic not near genes chr3L 12960048 intergenic not near genes chr3L 12962318 intergenic not near genes chr3L_6_12960001 chr3L_12960001 RAL-911 1070 chr3L 12978736 12978779 chr3L 12978835 12978859 7 93 6.5 1.0 3.8 1.5 123 chr3L 12978736 intergenic not near genes chr3L 12978798 intergenic not near genes chr3L 12978859 intergenic not near genes chr3L_7_12975001 chr3L_12975001 RAL-911 1071 chr3L 13017899 13017918 chr3L 13018001 13018020 4 100 2.0 6.0 4.0 0.8 121 chr3L 13017899 intergenic mRpL20 -,ste14 +,CR45445 - chr3L 13017960 intergenic mRpL20 -,ste14 +,CR45445 - chr3L 13018020 intergenic mRpL20 -,ste14 +,CR45445 - chr3L_4_13015001 chr3L_13015001 RAL-911 1072 chr3L 13069540 13069583 chr3L 13069639 13069682 9 99 3.5 4.5 4.0 1.8 142 chr3L 13069540 intergenic not near genes chr3L 13069611 intergenic not near genes chr3L 13069682 intergenic not near genes chr3L_9_13065001 chr3L_13065001 RAL-911 1073 chr3L 13257250 13257278 chr3L 13257340 13257364 5 95 1.5 1.5 1.5 2.0 114 chr3L 13257250 intron caps + chr3L 13257307 intron caps + chr3L 13257364 intron caps + chr3L_5_13255001 chr3L_13255001 RAL-911 1074 chr3L 13311001 13311052 chr3L 13311099 13311118 11 79 2.0 1.5 1.8 3.9 117 chr3L 13311001 intergenic not near genes chr3L 13311060 intergenic not near genes chr3L 13311118 intergenic not near genes chr3L_11_13310001 chr3L_13310001 RAL-911 1075 chr3L 13315836 13315851 chr3L 13315943 13315958 8 107 2.0 2.0 2.0 2.7 122 chr3L 13315836 intergenic not near genes chr3L 13315897 intergenic not near genes chr3L 13315958 intergenic not near genes chr3L_8_13315001 chr3L_13315001 RAL-911 1076 chr3L 13365027 13365059 chr3L 13365124 13365147 5 95 6.5 0.0 3.2 1.2 120 chr3L 13365027 intergenic not near genes chr3L 13365087 intergenic not near genes chr3L 13365147 intergenic not near genes chr3L_5_13365001 chr3L_13365001 RAL-911 1077 chr3L 13374235 13374272 chr3L 13374334 13374370 10 103 1.5 3.0 2.2 3.1 135 chr3L 13374235 intergenic not near genes chr3L 13374302 intergenic not near genes chr3L 13374370 intergenic not near genes chr3L_10_13370001 chr3L_13370001 RAL-911 1078 chr3L 13396046 13396082 chr3L 13396143 13396179 5 97 4.5 0.0 2.2 1.6 133 chr3L 13396046 intergenic sens - chr3L 13396112 intergenic sens - chr3L 13396179 intergenic sens - chr3L_5_13395001 chr3L_13395001 RAL-911 1079 chr3L 13452650 13452667 chr3L 13452758 13452775 7 107 0.0 2.0 1.0 3.5 125 chr3L 13452650 intron CG10738 + chr3L 13452712 intron CG10738 + chr3L 13452775 intron CG10738 + chr3L_7_13450001 chr3L_13450001 RAL-911 1080 chr3L 13455748 13455784 chr3L 13455908 13455920 13 168 5.0 2.0 3.5 2.9 172 chr3L 13455748 intron CG10738 + chr3L 13455834 intron CG10738 + chr3L 13455920 intron CG10738 + chr3L_13_13455001 chr3L_13455001 RAL-911 1081 chr3L 13559970 13559978 chr3L 13560046 13560084 5 100 2.5 2.0 2.2 1.6 114 chr3L 13559970 intron bru-3 - chr3L 13560027 intron bru-3 - chr3L 13560084 intron bru-3 - chr3L_5_13560001 chr3L_13560001 RAL-911 1082 chr3L 13610188 13610220 chr3L 13610305 13610335 4 109 2.5 2.5 2.5 1.1 147 chr3L 13610188 intron bru-3 - chr3L 13610262 intron bru-3 - chr3L 13610335 intron bru-3 - chr3L_4_13610001 chr3L_13610001 RAL-911 1083 chr3L 13740016 13740038 chr3L 13740128 13740150 4 112 1.5 2.5 2.0 1.3 134 chr3L 13740016 intron bru-3 - chr3L 13740083 intron bru-3 - chr3L 13740150 intron bru-3 - chr3L_4_13740001 chr3L_13740001 RAL-911 1084 chr3L 13768999 13769002 chr3L 13769104 13769105 4 105 0.0 3.5 1.8 1.4 106 chr3L 13768999 intron bru-3 - chr3L 13769052 intron bru-3 - chr3L 13769105 intron bru-3 - chr3L_4_13765001 chr3L_13765001 RAL-911 1085 chr3L 13769008 13769033 chr3L 13769103 13769139 6 104 0.0 3.5 1.8 2.1 131 chr3L 13769008 intron bru-3 - chr3L 13769074 intron bru-3 - chr3L 13769139 intron bru-3 - chr3L_6_13765001 chr3L_13765001 RAL-911 1086 chr3L 13804530 13804565 chr3L 13822836 13822845 roo 4 18297 5.0 4.5 4.8 0.7 18315 chr3L 13804530 intergenic not near genes chr3L 13813688 intergenic not near genes chr3L 13822845 intergenic not near genes chr3L_4_13810001 chr3L_13810001 RAL-911 1087 chr3L 13823862 13823871 chr3L 13824051 13824058 7 189 4.5 5.5 5.0 1.2 196 chr3L 13823862 intergenic not near genes chr3L 13823960 intergenic not near genes chr3L 13824058 intergenic not near genes chr3L_7_13820001 chr3L_13820001 RAL-911 1088 chr3L 13828684 13828721 chr3L 13828780 13828817 11 95 3.0 3.5 3.2 2.6 133 chr3L 13828684 intergenic not near genes chr3L 13828750 intergenic not near genes chr3L 13828817 intergenic not near genes chr3L_11_13825001 chr3L_13825001 RAL-911 1089 chr3L 13841136 13841156 chr3L 13841243 13841263 4 107 5.5 1.5 3.5 0.9 127 chr3L 13841136 3` UTR CG8757 - chr3L 13841200 3` UTR CG8757 - chr3L 13841263 3` UTR CG8757 - chr3L_4_13840001 chr3L_13840001 RAL-911 1090 chr3L 14141390 14141410 chr3L 14141497 14141517 8 107 1.5 0.0 0.8 4.4 127 chr3L 14141390 intergenic not near genes chr3L 14141454 intergenic not near genes chr3L 14141517 intergenic not near genes chr3L_8_14140001 chr3L_14140001 RAL-911 1091 chr3L 14185153 14185187 chr3L 14185236 14185283 5 90 3.5 1.0 2.2 1.6 130 chr3L 14185153 intergenic not near genes chr3L 14185218 intergenic not near genes chr3L 14185283 intergenic not near genes chr3L_5_14185001 chr3L_14185001 RAL-911 1092 chr3L 14194707 14194739 chr3L 14194803 14194835 16 96 4.5 1.0 2.8 4.2 128 chr3L 14194707 intron nuf + chr3L 14194771 intron nuf + chr3L 14194835 intron nuf + chr3L_16_14190001 chr3L_14190001 RAL-911 1093 chr3L 14196407 14196445 chr3L 14196506 14196550 17 102 1.0 3.0 2.0 5.7 143 chr3L 14196407 intron nuf + chr3L 14196478 intron nuf + chr3L 14196550 intron nuf + chr3L_17_14195001 chr3L_14195001 RAL-911 1094 chr3L 14239981 14240002 chr3L 14240088 14240114 4 110 2.5 2.5 2.5 1.1 133 chr3L 14239981 intergenic not near genes chr3L 14240048 intergenic not near genes chr3L 14240114 intergenic not near genes chr3L_4_14240001 chr3L_14240001 RAL-911 1095 chr3L 14296006 14296010 chr3L 14296472 14296479 roo 6 485 0.5 4.0 2.2 1.9 473 chr3L 14296006 intron fz + chr3L 14296242 intron fz + chr3L 14296479 intron fz + chr3L_6_14295001 chr3L_14295001 RAL-911 1096 chr3L 14341424 14341439 chr3L 14341579 14341594 6 155 0.0 1.5 0.8 3.3 170 chr3L 14341424 intron fz + chr3L 14341509 intron fz + chr3L 14341594 intron fz + chr3L_6_14340001 chr3L_14340001 RAL-911 1097 chr3L 14356498 14356524 chr3L 14356598 14356624 11 98 4.0 1.5 2.8 2.9 126 chr3L 14356498 intron fz + chr3L 14356561 intron fz + chr3L 14356624 intron fz + chr3L_11_14355001 chr3L_14355001 RAL-911 1098 chr3L 14411845 14411890 chr3L 14411944 14411989 9 97 4.0 2.0 3.0 2.2 144 chr3L 14411845 intron CG3919 + chr3L 14411917 intron CG3919 + chr3L 14411989 intron CG3919 + chr3L_9_14410001 chr3L_14410001 RAL-911 1099 chr3L 14437860 14437899 chr3L 14437974 14437978 12 106 5.5 1.5 3.5 2.7 118 chr3L 14437860 intron bbg - chr3L 14437919 intron bbg - chr3L 14437978 intron bbg - chr3L_12_14435001 chr3L_14435001 RAL-911 1100 chr3L 14462896 14462910 chr3L 14463004 14463018 6 107 0.0 7.0 3.5 1.3 122 chr3L 14462896 intron bbg - chr3L 14462957 intron bbg - chr3L 14463018 intron bbg - chr3L_6_14460001 chr3L_14460001 RAL-911 1101 chr3L 14468428 14468474 chr3L 14473654 14473700 copia 14 5224 2.0 2.5 2.2 4.4 5272 chr3L 14468428 intron bbg - chr3L 14471064 intron bbg - chr3L 14473700 intron bbg - chr3L_14_14470001 chr3L_14470001 RAL-911 1102 chr3L 14486009 14486041 chr3L 14486110 14486117 9 96 2.5 5.0 3.8 1.9 108 chr3L 14486009 intron bbg - chr3L 14486063 intron bbg - chr3L 14486117 intron bbg - chr3L_9_14485001 chr3L_14485001 RAL-911 1103 chr3L 14522088 14522125 chr3L 14522202 14522242 9 118 1.5 1.5 1.5 3.6 154 chr3L 14522088 intron bbg - chr3L 14522165 intron bbg - chr3L 14522242 intron bbg - chr3L_9_14520001 chr3L_14520001 RAL-911 1104 chr3L 14524320 14524355 chr3L 14529102 14529139 F-element 4 4782 4.5 0.0 2.2 1.2 4819 chr3L 14524320 intron bbg - chr3L 14526730 intron bbg - chr3L 14529139 intron bbg - chr3L_4_14525001 chr3L_14525001 RAL-911 1105 chr3L 14531207 14531245 chr3L 14531340 14531378 8 133 0.5 6.5 3.5 1.8 171 chr3L 14531207 intron bbg - chr3L 14531292 intron bbg - chr3L 14531378 intron bbg - chr3L_8_14530001 chr3L_14530001 RAL-911 1106 chr3L 14543683 14543736 chr3L 14543789 14543842 11 105 5.0 0.5 2.8 2.9 159 chr3L 14543683 intron CG9238 - chr3L 14543762 intron CG9238 - chr3L 14543842 intron CG9238 - chr3L_11_14540001 chr3L_14540001 RAL-911 1107 chr3L 14565732 14565774 chr3L 14565838 14565885 13 110 2.0 1.5 1.8 4.6 153 chr3L 14565732 intergenic not near genes chr3L 14565808 intergenic not near genes chr3L 14565885 intergenic not near genes chr3L_13_14565001 chr3L_14565001 RAL-911 1108 chr3L 14600904 14600951 chr3L 14601006 14601037 8 95 2.0 1.0 1.5 3.2 133 chr3L 14600904 intergenic not near genes chr3L 14600970 intergenic not near genes chr3L 14601037 intergenic not near genes chr3L_8_14600001 chr3L_14600001 RAL-911 1109 chr3L 14638324 14638366 chr3L 14638439 14638481 5 113 0.5 5.0 2.8 1.3 157 chr3L 14638324 intron dlp + chr3L 14638402 intron dlp + chr3L 14638481 intron dlp + chr3L_5_14635001 chr3L_14635001 RAL-911 1110 chr3L 14684614 14684636 chr3L 14684719 14684732 7 106 1.5 2.0 1.8 2.5 118 chr3L 14684614 intron ome + chr3L 14684673 intron ome + chr3L 14684732 intron ome + chr3L_7_14680001 chr3L_14680001 RAL-911 1111 chr3L 14725586 14725623 chr3L 14728600 14728633 Doc 6 3010 0.0 5.0 2.5 1.7 3047 chr3L 14725586 intron ome + chr3L 14727110 intron ome + chr3L 14728633 intron ome + chr3L_6_14725001 chr3L_14725001 RAL-911 1112 chr3L 14730010 14730055 chr3L 14730113 14730155 12 102 2.0 4.0 3.0 3.0 145 chr3L 14730010 intron ome + chr3L 14730082 intron ome + chr3L 14730155 intron ome + chr3L_12_14730001 chr3L_14730001 RAL-911 1113 chr3L 14730938 14730984 chr3L 14731042 14731088 15 102 0.5 3.5 2.0 5.0 150 chr3L 14730938 intron ome + chr3L 14731013 intron ome + chr3L 14731088 intron ome + chr3L_15_14730001 chr3L_14730001 RAL-911 1114 chr3L 14740872 14740921 chr3L 14740981 14741030 22 109 5.0 2.5 3.8 4.6 158 chr3L 14740872 intron ome + chr3L 14740951 intron ome + chr3L 14741030 intron ome + chr3L_22_14740001 chr3L_14740001 RAL-911 1115 chr3L 14825141 14825156 chr3L 14832888 14832896 Stalker2 5 7746 2.0 8.0 5.0 0.8 7755 chr3L 14825141 intron CG17839 + chr3L 14829018 intron CG17839 + chr3L 14832896 intron CG17839 + chr3L_5_14825001 chr3L_14825001 RAL-911 1116 chr3L 14839018 14839046 chr3L 14839127 14839155 5 106 3.5 6.5 5.0 0.8 137 chr3L 14839018 intron CG17839 + chr3L 14839086 intron CG17839 + chr3L 14839155 intron CG17839 + chr3L_5_14835001 chr3L_14835001 RAL-911 1117 chr3L 14865352 14865380 chr3L 14865468 14865496 6 111 1.5 4.5 3.0 1.5 144 chr3L 14865352 exon CG17839 + chr3L 14865424 intron CG17839 + chr3L 14865496 intron CG17839 + chr3L_6_14865001 chr3L_14865001 RAL-911 1118 chr3L 14876082 14876131 chr3L 14876336 14876375 12 252 4.0 5.5 4.8 2.1 293 chr3L 14876082 intron CG17839 + chr3L 14876228 intron CG17839 + chr3L 14876375 intron CG17839 + chr3L_12_14875001 chr3L_14875001 RAL-911 1119 chr3L 14933441 14933461 chr3L 14933543 14933563 5 102 2.0 2.5 2.2 1.6 122 chr3L 14933441 intron DCX-EMAP + chr3L 14933502 intron DCX-EMAP + chr3L 14933563 intron DCX-EMAP + chr3L_5_14930001 chr3L_14930001 RAL-911 1120 chr3L 14959312 14959352 chr3L 14959437 14959476 9 123 4.0 4.0 4.0 1.8 164 chr3L 14959312 intergenic not near genes chr3L 14959394 intergenic not near genes chr3L 14959476 intergenic not near genes chr3L_9_14955001 chr3L_14955001 RAL-911 1121 chr3L 14959969 14960012 chr3L 14960073 14960116 17 102 4.0 5.0 4.5 3.1 147 chr3L 14959969 intergenic not near genes chr3L 14960042 intergenic not near genes chr3L 14960116 intergenic not near genes chr3L_17_14960001 chr3L_14960001 RAL-911 1122 chr3L 14970751 14970761 chr3L 14971083 14971093 F-element 5 332 1.0 4.0 2.5 1.4 342 chr3L 14970751 intergenic Tom + chr3L 14970922 intergenic not near genes chr3L 14971093 intergenic not near genes chr3L_5_14970001 chr3L_14970001 RAL-911 1123 chr3L 15037619 15037667 chr3L 15038061 15038108 12 442 2.5 1.5 2.0 4.0 489 chr3L 15037619 intron Sytbeta - chr3L 15037864 intron Sytbeta - chr3L 15038108 intron Sytbeta - chr3L_12_15035001 chr3L_15035001 RAL-911 1124 chr3L 15054585 15054610 chr3L 15054669 15054706 6 89 5.5 4.0 4.8 1.0 121 chr3L 15054585 intron Sytbeta - chr3L 15054646 intron Sytbeta - chr3L 15054706 intron Sytbeta - chr3L_6_15050001 chr3L_15050001 RAL-911 1125 chr3L 15085030 15085079 chr3L 15086216 15086265 1360 6 1185 4.5 3.0 3.8 1.2 1235 chr3L 15085030 intron cp309 - chr3L 15085648 intron cp309 - chr3L 15086265 intron cp309 - chr3L_6_15085001 chr3L_15085001 RAL-911 1126 chr3L 15165032 15165037 chr3L 15165151 15165155 4 118 2.0 0.5 1.2 1.8 123 chr3L 15165032 intergenic not near genes chr3L 15165094 intergenic not near genes chr3L 15165155 intergenic not near genes chr3L_4_15165001 chr3L_15165001 RAL-911 1127 chr3L 15233536 15233584 chr3L 15233637 15233665 9 98 4.0 6.5 5.2 1.5 129 chr3L 15233536 intergenic not near genes chr3L 15233600 intergenic not near genes chr3L 15233665 intergenic not near genes chr3L_9_15230001 chr3L_15230001 RAL-911 1128 chr3L 15295750 15295786 chr3L 15298613 15298647 gypsy5 7 2863 7.5 4.0 5.8 1.0 2897 chr3L 15295750 intergenic not near genes chr3L 15297198 intergenic not near genes chr3L 15298647 intergenic Best4 + chr3L_7_15295001 chr3L_15295001 RAL-911 1129 chr3L 15333122 15333169 chr3L 15333221 15333271 10 100 0.5 2.5 1.5 4.0 149 chr3L 15333122 intergenic CR43247 + chr3L 15333196 intergenic CR43247 + chr3L 15333271 intergenic CR43247 + chr3L_10_15330001 chr3L_15330001 RAL-911 1130 chr3L 15353650 15353672 chr3L 15354002 15354044 4 360 1.0 2.0 1.5 1.6 394 chr3L 15353650 intergenic not near genes chr3L 15353847 intergenic not near genes chr3L 15354044 intergenic not near genes chr3L_4_15350001 chr3L_15350001 RAL-911 1131 chr3L 15384944 15384988 chr3L 15385088 15385106 11 143 1.5 2.0 1.8 3.9 162 chr3L 15384944 intergenic not near genes chr3L 15385025 intergenic not near genes chr3L 15385106 intergenic not near genes chr3L_11_15385001 chr3L_15385001 RAL-911 1132 chr3L 15406009 15406044 chr3L 15406111 15406146 4 102 3.5 2.5 3.0 1.0 137 chr3L 15406009 intergenic not near genes chr3L 15406078 intergenic not near genes chr3L 15406146 intergenic not near genes chr3L_4_15405001 chr3L_15405001 RAL-911 1133 chr3L 15423746 15423774 chr3L 15426610 15426638 opus 5 2864 8.0 5.0 6.5 0.7 2892 chr3L 15423746 intergenic not near genes chr3L 15425192 intergenic not near genes chr3L 15426638 intergenic not near genes chr3L_5_15425001 chr3L_15425001 RAL-911 1134 chr3L 15432297 15432346 chr3L 15432653 15432691 13 355 2.5 1.5 2.0 4.3 394 chr3L 15432297 intergenic not near genes chr3L 15432494 intergenic not near genes chr3L 15432691 intergenic not near genes chr3L_13_15430001 chr3L_15430001 RAL-911 1135 chr3L 15475010 15475056 chr3L 15475437 15475464 4 414 4.5 2.5 3.5 0.9 454 chr3L 15475010 intergenic not near genes chr3L 15475237 intergenic not near genes chr3L 15475464 intergenic not near genes chr3L_4_15475001 chr3L_15475001 RAL-911 1136 chr3L 15501231 15501258 chr3L 15501328 15501339 4 96 1.0 1.5 1.2 1.8 108 chr3L 15501231 exon CG7272 + chr3L 15501285 intron CG7272 + chr3L 15501339 intron CG7272 + chr3L_4_15500001 chr3L_15500001 RAL-911 1137 chr3L 15629885 15629910 chr3L 15630029 15630054 6 144 5.0 4.0 4.5 1.1 169 chr3L 15629885 intron comm3 - chr3L 15629970 intron comm3 - chr3L 15630054 intron comm3 - chr3L_6_15625001 chr3L_15625001 RAL-911 1138 chr3L 15754461 15754477 chr3L 15754573 15754589 7 112 2.5 0.5 1.5 2.8 128 chr3L 15754461 intergenic not near genes chr3L 15754525 intergenic not near genes chr3L 15754589 intergenic not near genes chr3L_7_15750001 chr3L_15750001 RAL-911 1139 chr3L 15756860 15756880 chr3L 15756963 15756969 4 100 5.0 0.0 2.5 1.1 109 chr3L 15756860 intergenic not near genes chr3L 15756914 intergenic not near genes chr3L 15756969 intergenic not near genes chr3L_4_15755001 chr3L_15755001 RAL-911 1140 chr3L 15760846 15760847 chr3L 24821492 24821494 5 9060647 8.5 6.0 7.2 0.6 9060648 chr3L 15760846 intergenic not near genes chr3L 20291170 intron gogo - chr3L 24821494 intergenic not near genes chr3L_5_20290001 chr3L_20290001 RAL-911 1141 chr3L 15781635 15781675 chr3L 15781786 15781844 6 163 0.0 0.0 0.0 6.0 209 chr3L 15781635 intergenic not near genes chr3L 15781740 intergenic not near genes chr3L 15781844 intergenic not near genes chr3L_6_15780001 chr3L_15780001 RAL-911 1142 chr3L 15833807 15833843 chr3L 15834027 15834062 9 219 35.5 38.5 37.0 0.2 255 chr3L 15833807 3` UTR,3` UTR CG12713 +,CG18081 - chr3L 15833934 3` UTR,3` UTR CG12713 +,CG18081 - chr3L 15834062 3` UTR CG18081 - chr3L_9_15830001 chr3L_15830001 RAL-911 1143 chr3L 15883176 15883219 chr3L 15883489 15883532 7 311 4.0 2.0 3.0 1.8 356 chr3L 15883176 intron pHCl - chr3L 15883354 intron pHCl - chr3L 15883532 intron pHCl - chr3L_7_15880001 chr3L_15880001 RAL-911 1144 chr3L 15884228 15884251 chr3L 15884331 15884353 4 103 4.5 4.0 4.2 0.8 125 chr3L 15884228 intron pHCl - chr3L 15884290 intron pHCl - chr3L 15884353 intron pHCl - chr3L_4_15880001 chr3L_15880001 RAL-911 1145 chr3L 15946485 15946523 chr3L 15946591 15946629 6 106 6.5 1.0 3.8 1.2 144 chr3L 15946485 intron Pka-C3 - chr3L 15946557 intron Pka-C3 - chr3L 15946629 intron Pka-C3 - chr3L_6_15945001 chr3L_15945001 RAL-911 1146 chr3L 15989217 15989227 chr3L 15989320 15989330 5 103 0.5 0.5 0.5 3.3 113 chr3L 15989217 intron Hip14 + chr3L 15989274 intron Hip14 + chr3L 15989330 intron Hip14 + chr3L_5_15985001 chr3L_15985001 RAL-911 1147 chr3L 16015813 16015851 chr3L 16015911 16015930 6 95 2.5 3.0 2.8 1.6 117 chr3L 16015813 intergenic not near genes chr3L 16015872 intergenic not near genes chr3L 16015930 intergenic not near genes chr3L_6_16015001 chr3L_16015001 RAL-911 1148 chr3L 16180347 16180363 chr3L 16180469 16180485 5 122 2.0 4.0 3.0 1.2 138 chr3L 16180347 intergenic not near genes chr3L 16180416 intergenic not near genes chr3L 16180485 intergenic not near genes chr3L_5_16180001 chr3L_16180001 RAL-911 1149 chr3L 16184089 16184128 chr3L 16188928 16188967 X-element 11 4839 2.0 2.0 2.0 3.7 4878 chr3L 16184089 intergenic not near genes chr3L 16186528 intergenic not near genes chr3L 16188967 intergenic not near genes chr3L_11_16185001 chr3L_16185001 RAL-911 1150 chr3L 16431828 16431861 chr3L 16431942 16431976 6 115 3.5 6.0 4.8 1.0 148 chr3L 16431828 intron,intron CG33158 +,dsx-c73A - chr3L 16431902 intron,intron CG33158 +,dsx-c73A - chr3L 16431976 intron,intron CG33158 +,dsx-c73A - chr3L_6_16430001 chr3L_16430001 RAL-911 1151 chr3L 16443838 16443867 chr3L 16446198 16446212 Doc 6 2351 3.0 1.5 2.2 1.9 2374 chr3L 16443838 intron,intron CG33158 +,dsx-c73A - chr3L 16445025 intron,intron CG33158 +,dsx-c73A - chr3L 16446212 intron,intron CG33158 +,dsx-c73A - chr3L_6_16445001 chr3L_16445001 RAL-911 1152 chr3L 16450002 16450045 chr3L 16450106 16450149 8 104 0.0 2.0 1.0 4.0 147 chr3L 16450002 intron,intron CG33158 +,dsx-c73A - chr3L 16450076 intron,intron CG33158 +,dsx-c73A - chr3L 16450149 intron,exon CG33158 +,dsx-c73A - chr3L_8_16450001 chr3L_16450001 RAL-911 1153 chr3L 16533575 16533583 chr3L 16533683 16533714 5 124 2.0 2.5 2.2 1.6 139 chr3L 16533575 intron CG43373 - chr3L 16533644 intron CG43373 - chr3L 16533714 intron CG43373 - chr3L_5_16530001 chr3L_16530001 RAL-911 1154 chr3L 16540035 16540085 chr3L 16540143 16540193 16 107 2.0 3.0 2.5 4.6 158 chr3L 16540035 intron CG43373 - chr3L 16540114 intron CG43373 - chr3L 16540193 intron CG43373 - chr3L_16_16540001 chr3L_16540001 RAL-911 1155 chr3L 16560327 16560336 chr3L 16560387 16560441 4 92 1.5 2.5 2.0 1.3 114 chr3L 16560327 intergenic not near genes chr3L 16560384 intergenic not near genes chr3L 16560441 intergenic not near genes chr3L_4_16560001 chr3L_16560001 RAL-911 1156 chr3L 16616494 16616527 chr3L 16621841 16621872 297 8 5345 5.0 4.5 4.8 1.4 5378 chr3L 16616494 3` UTR Abl - chr3L 16619183 3` UTR Abl - chr3L 16621872 3` UTR Abl - chr3L_8_16615001 chr3L_16615001 RAL-911 1157 chr3L 16684003 16684038 chr3L 16689244 16689279 copia 9 5241 5.5 5.0 5.2 1.5 5276 chr3L 16684003 intron,intron Lasp -,CG43954 - chr3L 16686641 intron,intron Lasp -,CG43954 - chr3L 16689279 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_9_16685001 chr3L_16685001 RAL-911 1158 chr3L 16707953 16708005 chr3L 16708195 16708247 13 236 2.5 7.5 5.0 2.2 294 chr3L 16707953 intron,intron Lasp -,CG43954 - chr3L 16708100 intron,intron Lasp -,CG43954 - chr3L 16708247 intron,intron Lasp -,CG43954 - chr3L_13_16705001 chr3L_16705001 RAL-911 1159 chr3L 16817856 16817894 chr3L 16818016 16818054 7 160 3.5 4.0 3.8 1.5 198 chr3L 16817856 intron,intron nudC +,CG13024 - chr3L 16817955 intron,intron nudC +,CG13024 - chr3L 16818054 intron,intron nudC +,CG13024 - chr3L_7_16815001 chr3L_16815001 RAL-911 1160 chr3L 16818751 16818779 chr3L 16818829 16818875 13 94 4.0 7.0 5.5 2.0 124 chr3L 16818751 intron,intron nudC +,CG13024 - chr3L 16818813 intron,intron nudC +,CG13024 - chr3L 16818875 intron,intron nudC +,CG13024 - chr3L_13_16815001 chr3L_16815001 RAL-911 1161 chr3L 16845005 16845044 chr3L 16845138 16845161 5 127 1.5 6.5 4.0 1.0 156 chr3L 16845005 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845083 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845161 intergenic CG9669 -,CG9715 + chr3L_5_16845001 chr3L_16845001 RAL-911 1162 chr3L 16861014 16861054 chr3L 16861134 16861176 9 121 2.0 2.0 2.0 3.0 162 chr3L 16861014 intron,exon Rh4 -,CG13029 + chr3L 16861095 intron,intron Rh4 -,CG13029 + chr3L 16861176 intron,exon Rh4 -,CG13029 + chr3L_9_16860001 chr3L_16860001 RAL-911 1163 chr3L 17027153 17027178 chr3L 17027265 17027290 5 112 4.5 7.5 6.0 0.7 137 chr3L 17027153 intergenic Fit2 +,CG7730 + chr3L 17027222 intergenic Fit2 +,CG7730 + chr3L 17027290 intergenic Fit2 +,CG7730 + chr3L_5_17025001 chr3L_17025001 RAL-911 1164 chr3L 17034929 17034966 chr3L 17035137 17035171 G2 11 208 0.5 4.5 2.5 3.1 242 chr3L 17034929 intergenic not near genes chr3L 17035050 intergenic not near genes chr3L 17035171 intergenic beg + chr3L_11_17035001 chr3L_17035001 RAL-911 1165 chr3L 17084988 17085030 chr3L 17094157 17094199 roo 16 9168 6.5 6.0 6.2 2.2 9211 chr3L 17084988 intron Rbp6 - chr3L 17089594 intron Rbp6 - chr3L 17094199 intron Rbp6 - chr3L_16_17085001 chr3L_17085001 RAL-911 1166 chr3L 17135455 17135475 chr3L 17135580 17135590 4 122 2.5 4.5 3.5 0.9 135 chr3L 17135455 intron Rbp6 - chr3L 17135522 intron Rbp6 - chr3L 17135590 intron Rbp6 - chr3L_4_17135001 chr3L_17135001 RAL-911 1167 chr3L 17296946 17296962 chr3L 17297074 17297091 4 126 1.0 2.5 1.8 1.4 145 chr3L 17296946 intergenic not near genes chr3L 17297018 intergenic not near genes chr3L 17297091 intergenic not near genes chr3L_4_17295001 chr3L_17295001 RAL-911 1168 chr3L 17408902 17408928 chr3L 17408998 17409024 5 96 4.0 4.5 4.2 1.0 122 chr3L 17408902 intron blot - chr3L 17408963 intron blot - chr3L 17409024 intron blot - chr3L_5_17405001 chr3L_17405001 RAL-911 1169 chr3L 17578530 17578571 chr3L 17578651 17578693 6 122 3.5 0.0 1.8 2.1 163 chr3L 17578530 intron Eip74EF - chr3L 17578612 intron Eip74EF - chr3L 17578693 intron Eip74EF - chr3L_6_17575001 chr3L_17575001 RAL-911 1170 chr3L 17586945 17586997 chr3L 17587099 17587151 7 154 1.0 0.5 0.8 3.9 206 chr3L 17586945 intron Eip74EF - chr3L 17587048 intron Eip74EF - chr3L 17587151 intron Eip74EF - chr3L_7_17585001 chr3L_17585001 RAL-911 1171 chr3L 17594228 17594232 chr3L 17594329 17594333 4 101 7.0 4.0 5.5 0.6 105 chr3L 17594228 intron Eip74EF - chr3L 17594280 intron Eip74EF - chr3L 17594333 intron Eip74EF - chr3L_4_17590001 chr3L_17590001 RAL-911 1172 chr3L 17594234 17594274 chr3L 17594321 17594375 11 100 1.0 3.0 2.0 3.7 141 chr3L 17594234 intron Eip74EF - chr3L 17594304 intron Eip74EF - chr3L 17594375 intron Eip74EF - chr3L_11_17590001 chr3L_17590001 RAL-911 1173 chr3L 17675016 17675043 chr3L 17675146 17675161 4 127 1.0 6.5 3.8 0.8 145 chr3L 17675016 intron CG34251 + chr3L 17675088 intron CG34251 + chr3L 17675161 intron CG34251 + chr3L_4_17675001 chr3L_17675001 RAL-911 1174 chr3L 17678881 17678898 chr3L 17678985 17679002 5 104 3.5 0.0 1.8 1.8 121 chr3L 17678881 intron CG34251 + chr3L 17678942 intron CG34251 + chr3L 17679002 intron CG34251 + chr3L_5_17675001 chr3L_17675001 RAL-911 1175 chr3L 17691990 17691996 chr3L 17692093 17692099 5 103 0.0 11.0 5.5 0.8 109 chr3L 17691990 intron Ccn + chr3L 17692044 intron Ccn + chr3L 17692099 intron Ccn + chr3L_5_17690001 chr3L_17690001 RAL-911 1176 chr3L 17696148 17696190 chr3L 17696874 17696916 10 725 1.5 3.5 2.5 2.9 768 chr3L 17696148 intron Ccn + chr3L 17696532 intron Ccn + chr3L 17696916 intron Ccn + chr3L_10_17695001 chr3L_17695001 RAL-911 1177 chr3L 17730829 17730877 chr3L 17738179 17738227 mdg1 14 7347 9.0 3.5 6.2 1.9 7398 chr3L 17730829 intron Ccn + chr3L 17734528 intron Ccn + chr3L 17738227 intron Ccn + chr3L_14_17730001 chr3L_17730001 RAL-911 1178 chr3L 17743974 17744018 chr3L 17745763 17745803 7 1787 19.0 9.5 14.2 0.5 1829 chr3L 17743974 intron Ccn + chr3L 17744888 intron Ccn + chr3L 17745803 intron,exon Ccn +,CG6034 - chr3L_7_17740001 chr3L_17740001 RAL-911 1179 chr3L 17743951 17743970 chr3L 17746208 17746227 4 2257 22.5 17.0 19.8 0.2 2276 chr3L 17743951 intron Ccn + chr3L 17745089 intron Ccn + chr3L 17746227 intron,exon Ccn +,CG6034 - chr3L_4_17745001 chr3L_17745001 RAL-911 1180 chr3L 17787666 17787695 chr3L 17787779 17787808 5 113 4.5 6.5 5.5 0.8 142 chr3L 17787666 intergenic not near genes chr3L 17787737 intergenic not near genes chr3L 17787808 intergenic not near genes chr3L_5_17785001 chr3L_17785001 RAL-911 1181 chr3L 17789827 17789875 chr3L 17789923 17789971 16 95 1.5 2.5 2.0 5.3 144 chr3L 17789827 intergenic not near genes chr3L 17789899 intergenic not near genes chr3L 17789971 intergenic not near genes chr3L_16_17785001 chr3L_17785001 RAL-911 1182 chr3L 17799789 17799831 chr3L 17801596 17801638 S-element 15 1805 3.0 5.0 4.0 3.0 1849 chr3L 17799789 intron NUCB1 - chr3L 17800714 intron NUCB1 - chr3L 17801638 intron NUCB1 - chr3L_15_17800001 chr3L_17800001 RAL-911 1183 chr3L 17836199 17836226 chr3L 17836290 17836323 4 92 4.5 3.5 4.0 0.8 124 chr3L 17836199 intron Grd + chr3L 17836261 intron Grd + chr3L 17836323 intron Grd + chr3L_4_17835001 chr3L_17835001 RAL-911 1184 chr3L 17884672 17884712 chr3L 17884792 17884832 10 115 2.5 3.0 2.8 2.6 160 chr3L 17884672 intergenic CG5506 - chr3L 17884752 intergenic CG5506 - chr3L 17884832 intergenic CG5506 - chr3L_10_17880001 chr3L_17880001 RAL-911 1185 chr3L 17906569 17906599 chr3L 17906684 17906706 7 116 5.5 3.0 4.2 1.3 137 chr3L 17906569 intron Prestin - chr3L 17906638 intron Prestin - chr3L 17906706 intron Prestin - chr3L_7_17905001 chr3L_17905001 RAL-911 1186 chr3L 17918353 17918401 chr3L 17921176 17921224 opus 7 2823 2.0 3.0 2.5 2.0 2871 chr3L 17918353 intergenic not near genes chr3L 17919788 intergenic not near genes chr3L 17921224 intergenic not near genes chr3L_7_17915001 chr3L_17915001 RAL-911 1187 chr3L 17991565 17991587 chr3L 17991663 17991685 5 98 4.0 4.0 4.0 1.0 120 chr3L 17991565 intron Eip75B - chr3L 17991625 intron Eip75B - chr3L 17991685 intron Eip75B - chr3L_5_17990001 chr3L_17990001 RAL-911 1188 chr3L 18029943 18029967 chr3L 18030040 18030057 5 95 8.0 0.0 4.0 1.0 114 chr3L 18029943 intron Eip75B - chr3L 18030000 intron Eip75B - chr3L 18030057 intron Eip75B - chr3L_5_18030001 chr3L_18030001 RAL-911 1189 chr3L 18045020 18045036 chr3L 18045116 18045132 8 96 0.5 7.0 3.8 1.7 112 chr3L 18045020 intron Eip75B - chr3L 18045076 intron Eip75B - chr3L 18045132 intron Eip75B - chr3L_8_18045001 chr3L_18045001 RAL-911 1190 chr3L 18045039 18045045 chr3L 18045097 18045141 6 86 2.0 4.5 3.2 1.4 102 chr3L 18045039 intron Eip75B - chr3L 18045090 intron Eip75B - chr3L 18045141 intron Eip75B - chr3L_6_18045001 chr3L_18045001 RAL-911 1191 chr3L 18047691 18047705 chr3L 18056768 18056782 roo 6 9077 7.0 7.0 7.0 0.8 9091 chr3L 18047691 intron Eip75B - chr3L 18052236 intron Eip75B - chr3L 18056782 intron Eip75B - chr3L_6_18050001 chr3L_18050001 RAL-911 1192 chr3L 18047720 18047735 chr3L 18056797 18056807 roo 5 9076 2.0 15.0 8.5 0.5 9087 chr3L 18047720 intron Eip75B - chr3L 18052264 intron Eip75B - chr3L 18056807 intron Eip75B - chr3L_5_18050001 chr3L_18050001 RAL-911 1193 chr3L 18064047 18064077 chr3L 18064153 18064157 6 102 1.5 2.5 2.0 2.0 110 chr3L 18064047 intron Eip75B - chr3L 18064102 intron Eip75B - chr3L 18064157 intron Eip75B - chr3L_6_18060001 chr3L_18060001 RAL-911 1194 chr3L 18092761 18092791 chr3L 18092896 18092926 10 135 2.5 0.0 1.2 4.5 165 chr3L 18092761 intron CG13698 - chr3L 18092844 intron CG13698 - chr3L 18092926 intron CG13698 - chr3L_10_18090001 chr3L_18090001 RAL-911 1195 chr3L 18106248 18106278 chr3L 18106370 18106375 5 126 1.0 0.0 0.5 3.3 127 chr3L 18106248 intergenic CG13698 -,mRpS26 + chr3L 18106312 intergenic CG13698 -,mRpS26 + chr3L 18106375 intergenic mRpS26 +,CG13698 - chr3L_5_18105001 chr3L_18105001 RAL-911 1196 chr3L 18118192 18118241 chr3L 18118290 18118339 9 95 2.5 1.5 2.0 3.0 147 chr3L 18118192 3` UTR,intron CG32195 +,CG7341 + chr3L 18118266 3` UTR,intron CG32195 +,CG7341 + chr3L 18118339 3` UTR,intron CG32195 +,CG7341 + chr3L_9_18115001 chr3L_18115001 RAL-911 1197 chr3L 18133000 18133045 chr3L 18133110 18133155 15 109 2.0 0.0 1.0 7.5 155 chr3L 18133000 intergenic Cyp312a1 - chr3L 18133078 intergenic Cyp312a1 - chr3L 18133155 intergenic Cyp312a1 - chr3L_15_18130001 chr3L_18130001 RAL-911 1198 chr3L 18135682 18135708 chr3L 18135793 18135819 9 111 0.5 0.0 0.2 7.5 137 chr3L 18135682 intergenic CR44669 - chr3L 18135750 intergenic CR44669 - chr3L 18135819 3` UTR CR44669 - chr3L_9_18135001 chr3L_18135001 RAL-911 1199 chr3L 18160663 18160665 chr3L 18160764 18160767 4 102 4.0 3.5 3.8 0.8 104 chr3L 18160663 intron CG13699 - chr3L 18160715 intron CG13699 - chr3L 18160767 intron CG13699 - chr3L_4_18160001 chr3L_18160001 RAL-911 1200 chr3L 18163966 18164001 chr3L 18164188 18164223 6 222 6.5 0.0 3.2 1.4 257 chr3L 18163966 intergenic not near genes chr3L 18164094 intergenic not near genes chr3L 18164223 intergenic not near genes chr3L_6_18160001 chr3L_18160001 RAL-911 1201 chr3L 18164004 18164219 chr3L 18164186 18164406 7 201 0.0 0.0 0.0 7.0 402 chr3L 18164004 intergenic not near genes chr3L 18164205 intergenic not near genes chr3L 18164406 intergenic not near genes chr3L_7_18160001 chr3L_18160001 RAL-911 1202 chr3L 18198929 18198930 chr3L 24821492 24821493 7 6622563 12.5 6.0 9.2 0.7 6622564 chr3L 18198929 intergenic not near genes chr3L 21510211 intron M6 + chr3L 24821493 intergenic not near genes chr3L_7_21510001 chr3L_21510001 RAL-911 1203 chr3L 18203578 18203587 chr3L 18203693 18203695 5 114 6.5 0.0 3.2 1.2 117 chr3L 18203578 3` UTR CG7320 + chr3L 18203636 3` UTR CG7320 + chr3L 18203695 intergenic CG7320 + chr3L_5_18200001 chr3L_18200001 RAL-911 1204 chr3L 18248937 18248983 chr3L 18249055 18249101 10 117 3.0 2.5 2.8 2.6 164 chr3L 18248937 intergenic not near genes chr3L 18249019 intergenic not near genes chr3L 18249101 intergenic not near genes chr3L_10_18245001 chr3L_18245001 RAL-911 1205 chr3L 18301345 18301377 chr3L 18301454 18301486 7 109 2.0 3.0 2.5 2.0 141 chr3L 18301345 intergenic CG13700 - chr3L 18301416 intergenic CG13700 - chr3L 18301486 intergenic CG13700 - chr3L_7_18300001 chr3L_18300001 RAL-911 1206 chr3L 18383090 18383128 chr3L 18383194 18383218 7 100 2.0 2.5 2.2 2.2 128 chr3L 18383090 intergenic not near genes chr3L 18383154 intergenic not near genes chr3L 18383218 intergenic not near genes chr3L_7_18380001 chr3L_18380001 RAL-911 1207 chr3L 18408711 18408759 chr3L 18408817 18408832 14 103 3.5 5.0 4.2 2.7 121 chr3L 18408711 intergenic not near genes chr3L 18408772 intergenic not near genes chr3L 18408832 intergenic not near genes chr3L_14_18405001 chr3L_18405001 RAL-911 1208 chr3L 18436078 18436092 chr3L 18436196 18436210 5 118 1.0 5.5 3.2 1.2 132 chr3L 18436078 intergenic not near genes chr3L 18436144 intergenic not near genes chr3L 18436210 intergenic not near genes chr3L_5_18435001 chr3L_18435001 RAL-911 1209 chr3L 18445228 18445275 chr3L 18445326 18445359 9 95 6.0 1.5 3.8 1.9 131 chr3L 18445228 intergenic not near genes chr3L 18445294 intergenic not near genes chr3L 18445359 intergenic not near genes chr3L_9_18445001 chr3L_18445001 RAL-911 1210 chr3L 18456258 18456303 chr3L 18456366 18456411 9 108 1.5 3.0 2.2 2.8 153 chr3L 18456258 intergenic CR44670 - chr3L 18456334 intergenic CR44670 - chr3L 18456411 3` UTR CR44670 - chr3L_9_18455001 chr3L_18455001 RAL-911 1211 chr3L 18506140 18506160 chr3L 18509598 18509643 F-element 6 3477 1.5 6.0 3.8 1.2 3503 chr3L 18506140 intergenic not near genes chr3L 18507892 intergenic not near genes chr3L 18509643 intergenic not near genes chr3L_6_18505001 chr3L_18505001 RAL-911 1212 chr3L 18514893 18514941 chr3L 18520099 18520111 BS 9 5202 6.0 2.5 4.2 1.7 5218 chr3L 18514893 intergenic not near genes chr3L 18517502 intergenic not near genes chr3L 18520111 intergenic not near genes chr3L_9_18515001 chr3L_18515001 RAL-911 1213 chr3L 18528615 18528660 chr3L 18537796 18537828 roo 10 9176 4.0 4.0 4.0 2.0 9213 chr3L 18528615 intergenic not near genes chr3L 18533222 intergenic not near genes chr3L 18537828 intergenic not near genes chr3L_10_18530001 chr3L_18530001 RAL-911 1214 chr3L 18626189 18626243 chr3L 18626340 18626367 7 143 0.0 1.5 0.8 3.9 178 chr3L 18626189 5` UTR MYPT-75D + chr3L 18626278 5` UTR MYPT-75D + chr3L 18626367 intron MYPT-75D + chr3L_7_18625001 chr3L_18625001 RAL-911 1215 chr3L 18638567 18638599 chr3L 18638681 18638713 5 113 3.5 3.0 3.2 1.2 146 chr3L 18638567 intron MYPT-75D + chr3L 18638640 intron MYPT-75D + chr3L 18638713 intron MYPT-75D + chr3L_5_18635001 chr3L_18635001 RAL-911 1216 chr3L 18706637 18706667 chr3L 18706813 18706822 4 170 1.0 2.0 1.5 1.6 185 chr3L 18706637 intergenic not near genes chr3L 18706730 intergenic not near genes chr3L 18706822 intergenic not near genes chr3L_4_18705001 chr3L_18705001 RAL-911 1217 chr3L 18710778 18710792 chr3L 18718748 18718762 Stalker2 7 7970 3.5 2.5 3.0 1.8 7984 chr3L 18710778 intergenic not near genes chr3L 18714770 intergenic not near genes chr3L 18718762 intergenic not near genes chr3L_7_18710001 chr3L_18710001 RAL-911 1218 chr3L 18721770 18721795 chr3L 18721871 18721906 8 110 2.0 4.5 3.2 1.9 136 chr3L 18721770 intergenic CG12477 - chr3L 18721838 intergenic CG12477 - chr3L 18721906 3` UTR CG12477 - chr3L_8_18720001 chr3L_18720001 RAL-911 1219 chr3L 18736041 18736062 chr3L 18736156 18736177 7 115 3.5 3.5 3.5 1.6 136 chr3L 18736041 intergenic not near genes chr3L 18736109 intergenic not near genes chr3L 18736177 intergenic not near genes chr3L_7_18735001 chr3L_18735001 RAL-911 1220 chr3L 18772395 18772439 chr3L 18781096 18781140 roo 14 8699 2.5 0.5 1.5 5.6 8745 chr3L 18772395 intron ftz-f1 - chr3L 18776768 intron ftz-f1 - chr3L 18781140 intron ftz-f1 - chr3L_14_18775001 chr3L_18775001 RAL-911 1221 chr3L 18784374 18784403 chr3L 18784483 18784512 11 109 4.0 7.0 5.5 1.7 138 chr3L 18784374 intron ftz-f1 - chr3L 18784443 intron ftz-f1 - chr3L 18784512 intron ftz-f1 - chr3L_11_18780001 chr3L_18780001 RAL-911 1222 chr3L 18788764 18788791 chr3L 18788923 18788950 7 158 3.0 3.5 3.2 1.7 186 chr3L 18788764 intron ftz-f1 - chr3L 18788857 intron ftz-f1 - chr3L 18788950 intron ftz-f1 - chr3L_7_18785001 chr3L_18785001 RAL-911 1223 chr3L 18797308 18797331 chr3L 18797412 18797435 4 103 4.5 5.0 4.8 0.7 127 chr3L 18797308 intron ftz-f1 - chr3L 18797372 intron ftz-f1 - chr3L 18797435 intron ftz-f1 - chr3L_4_18795001 chr3L_18795001 RAL-911 1224 chr3L 18810128 18810178 chr3L 18810225 18810280 16 101 4.0 1.0 2.5 4.6 152 chr3L 18810128 intron CG14073 - chr3L 18810204 intron CG14073 - chr3L 18810280 intron CG14073 - chr3L_16_18810001 chr3L_18810001 RAL-911 1225 chr3L 18843855 18843875 chr3L 18843973 18843993 9 117 7.5 3.0 5.2 1.5 138 chr3L 18843855 intron Indy - chr3L 18843924 intron Indy - chr3L 18843993 intron Indy - chr3L_9_18840001 chr3L_18840001 RAL-911 1226 chr3L 18856989 18857010 chr3L 18857091 18857112 10 102 6.5 4.5 5.5 1.5 123 chr3L 18856989 5` UTR CR45388 + chr3L 18857050 5` UTR CR45388 + chr3L 18857112 5` UTR CR45388 + chr3L_10_18855001 chr3L_18855001 RAL-911 1227 chr3L 18924463 18924505 chr3L 18924559 18924601 10 96 2.5 4.0 3.2 2.4 138 chr3L 18924463 intron CG32204 - chr3L 18924532 intron CG32204 - chr3L 18924601 intron CG32204 - chr3L_10_18920001 chr3L_18920001 RAL-911 1228 chr3L 18933611 18933657 chr3L 18933720 18933751 9 109 3.5 3.0 3.2 2.1 140 chr3L 18933611 intron CG32204 - chr3L 18933681 intron CG32204 - chr3L 18933751 intron CG32204 - chr3L_9_18930001 chr3L_18930001 RAL-911 1229 chr3L 18957288 18957320 chr3L 18957378 18957405 9 91 1.5 1.0 1.2 4.1 117 chr3L 18957288 intergenic not near genes chr3L 18957346 intergenic not near genes chr3L 18957405 intergenic not near genes chr3L_9_18955001 chr3L_18955001 RAL-911 1230 chr3L 18969529 18969577 chr3L 18969625 18969673 7 92 1.5 2.0 1.8 2.5 144 chr3L 18969529 intergenic not near genes chr3L 18969601 intergenic not near genes chr3L 18969673 intergenic not near genes chr3L_7_18965001 chr3L_18965001 RAL-911 1231 chr3L 19029469 19029478 chr3L 19029556 19029592 4 111 1.5 2.0 1.8 1.4 123 chr3L 19029469 intron nkd - chr3L 19029530 intron nkd - chr3L 19029592 intron nkd - chr3L_4_19025001 chr3L_19025001 RAL-911 1232 chr3L 19117035 19117071 chr3L 19124496 19124508 mdg1 4 7458 4.5 3.5 4.0 0.8 7473 chr3L 19117035 intron CG14082 - chr3L 19120772 intron CG14082 - chr3L 19124508 intron CG14082 - chr3L_4_19120001 chr3L_19120001 RAL-911 1233 chr3L 19127367 19127390 chr3L 19127449 19127484 4 88 2.5 2.5 2.5 1.1 117 chr3L 19127367 intron CG14082 - chr3L 19127426 intron CG14082 - chr3L 19127484 intron CG14082 - chr3L_4_19125001 chr3L_19125001 RAL-911 1234 chr3L 19127713 19127758 chr3L 19127820 19127828 6 101 4.0 3.5 3.8 1.2 115 chr3L 19127713 intron CG14082 - chr3L 19127770 intron CG14082 - chr3L 19127828 intron CG14082 - chr3L_6_19125001 chr3L_19125001 RAL-911 1235 chr3L 19182390 19182416 chr3L 19182491 19182512 8 98 2.0 2.5 2.2 2.5 122 chr3L 19182390 intron fz2 - chr3L 19182451 intron fz2 - chr3L 19182512 intron fz2 - chr3L_8_19180001 chr3L_19180001 RAL-911 1236 chr3L 19208052 19208080 chr3L 19209431 19209450 Doc 4 1383 2.5 2.0 2.2 1.2 1398 chr3L 19208052 intron fz2 - chr3L 19208751 intron fz2 - chr3L 19209450 intron fz2 - chr3L_4_19205001 chr3L_19205001 RAL-911 1237 chr3L 19210110 19210120 chr3L 19210226 19210236 4 116 0.0 2.0 1.0 2.0 126 chr3L 19210110 intron fz2 - chr3L 19210173 intron fz2 - chr3L 19210236 intron fz2 - chr3L_4_19210001 chr3L_19210001 RAL-911 1238 chr3L 19222354 19222370 chr3L 19222494 19222511 4 141 8.0 3.0 5.5 0.6 157 chr3L 19222354 intron fz2 - chr3L 19222432 intron fz2 - chr3L 19222511 intron fz2 - chr3L_4_19220001 chr3L_19220001 RAL-911 1239 chr3L 19238706 19238751 chr3L 19238833 19238878 15 127 3.5 5.0 4.2 2.9 172 chr3L 19238706 intergenic not near genes chr3L 19238792 intergenic not near genes chr3L 19238878 intergenic not near genes chr3L_15_19235001 chr3L_19235001 RAL-911 1240 chr3L 19262213 19262241 chr3L 19262315 19262339 5 100 0.0 6.5 3.2 1.2 126 chr3L 19262213 3` UTR Bet1 + chr3L 19262276 3` UTR,3` UTR Bet1 +,Max - chr3L 19262339 3` UTR,3` UTR Bet1 +,Max - chr3L_5_19260001 chr3L_19260001 RAL-911 1241 chr3L 19342743 19342777 chr3L 19342854 19342888 10 110 6.0 3.0 4.5 1.8 145 chr3L 19342743 3` UTR CG32206 - chr3L 19342816 3` UTR CG32206 - chr3L 19342888 3` UTR CG32206 - chr3L_10_19340001 chr3L_19340001 RAL-911 1242 chr3L 19404962 19405004 chr3L 19405057 19405101 5 96 2.5 2.0 2.2 1.6 139 chr3L 19404962 intron CG32206 - chr3L 19405032 intron CG32206 - chr3L 19405101 intron CG32206 - chr3L_5_19405001 chr3L_19405001 RAL-911 1243 chr3L 19437018 19437052 chr3L 19437111 19437156 8 100 1.0 3.5 2.2 2.5 138 chr3L 19437018 intergenic not near genes chr3L 19437087 intergenic not near genes chr3L 19437156 intergenic not near genes chr3L_8_19435001 chr3L_19435001 RAL-911 1244 chr3L 19480648 19480684 chr3L 19480770 19480806 11 122 1.0 5.5 3.2 2.6 158 chr3L 19480648 intergenic not near genes chr3L 19480727 intergenic not near genes chr3L 19480806 intergenic not near genes chr3L_11_19480001 chr3L_19480001 RAL-911 1245 chr3L 19493891 19493929 chr3L 19494269 19494306 6 372 2.5 2.5 2.5 1.7 415 chr3L 19493891 intron CG9449 - chr3L 19494098 intron CG9449 - chr3L 19494306 intron CG9449 - chr3L_6_19490001 chr3L_19490001 RAL-911 1246 chr3L 19792352 19792367 chr3L 19792456 19792482 8 111 11.5 14.0 12.8 0.6 130 chr3L 19792352 intron,intron CG42637 -,Gyc76C - chr3L 19792417 intron,intron CG42637 -,Gyc76C - chr3L 19792482 intron,intron CG42637 -,Gyc76C - chr3L_8_19790001 chr3L_19790001 RAL-911 1247 chr3L 19820282 19820313 chr3L 19827848 19827878 412 14 7566 2.5 2.0 2.2 4.4 7596 chr3L 19820282 intron Deaf1 + chr3L 19824080 intron Deaf1 + chr3L 19827878 intron Deaf1 + chr3L_14_19820001 chr3L_19820001 RAL-911 1248 chr3L 19848487 19848531 chr3L 19857697 19857720 roo 11 9202 3.0 7.5 5.2 1.8 9233 chr3L 19848487 intron Papss + chr3L 19853104 intron Papss + chr3L 19857720 intron Papss + chr3L_11_19850001 chr3L_19850001 RAL-911 1249 chr3L 19861813 19861850 chr3L 19863617 19863658 S-element 7 1801 4.0 4.0 4.0 1.4 1845 chr3L 19861813 5` UTR CR45433 + chr3L 19862736 intergenic not near genes chr3L 19863658 intergenic not near genes chr3L_7_19860001 chr3L_19860001 RAL-911 1250 chr3L 19981197 19981236 chr3L 19981297 19981336 7 100 2.0 4.0 3.0 1.8 139 chr3L 19981197 intergenic CG17732 + chr3L 19981266 intergenic CG17732 + chr3L 19981336 intergenic CG17732 + chr3L_7_19980001 chr3L_19980001 RAL-911 1251 chr3L 20113406 20113428 chr3L 20113508 20113535 6 104 7.5 6.5 7.0 0.8 129 chr3L 20113406 intergenic not near genes chr3L 20113470 intergenic not near genes chr3L 20113535 intergenic not near genes chr3L_6_20110001 chr3L_20110001 RAL-911 1252 chr3L 20113433 20113444 chr3L 20113500 20113550 5 99 4.5 5.0 4.8 0.9 117 chr3L 20113433 intergenic not near genes chr3L 20113492 intergenic not near genes chr3L 20113550 intergenic not near genes chr3L_5_20110001 chr3L_20110001 RAL-911 1253 chr3L 20113640 20113682 chr3L 20122917 20122959 roo 11 9276 6.0 5.0 5.5 1.7 9319 chr3L 20113640 intergenic not near genes chr3L 20118300 intergenic not near genes chr3L 20122959 intergenic not near genes chr3L_11_20115001 chr3L_20115001 RAL-911 1254 chr3L 20143065 20143107 chr3L 20143163 20143206 5 98 2.0 5.5 3.8 1.0 141 chr3L 20143065 intergenic not near genes chr3L 20143136 intergenic not near genes chr3L 20143206 intergenic not near genes chr3L_5_20140001 chr3L_20140001 RAL-911 1255 chr3L 20206744 20206790 chr3L 20206846 20206882 18 101 7.0 3.5 5.2 2.9 138 chr3L 20206744 intergenic not near genes chr3L 20206813 intergenic not near genes chr3L 20206882 intergenic not near genes chr3L_18_20205001 chr3L_20205001 RAL-911 1256 chr3L 20262786 20262822 chr3L 20262908 20262941 7 118 2.0 3.0 2.5 2.0 155 chr3L 20262786 exon rdgC + chr3L 20262864 intron rdgC + chr3L 20262941 intron rdgC + chr3L_7_20260001 chr3L_20260001 RAL-911 1257 chr3L 20283679 20283706 chr3L 20283766 20283778 5 83 1.5 3.0 2.2 1.6 99 chr3L 20283679 intron gogo - chr3L 20283728 intron gogo - chr3L 20283778 intron gogo - chr3L_5_20280001 chr3L_20280001 RAL-911 1258 chr3L 20476735 20476784 chr3L 20484354 20484403 springer 13 7618 2.0 5.0 3.5 2.9 7668 chr3L 20476735 3` UTR isoQC + chr3L 20480569 intergenic not near genes chr3L 20484403 3` UTR ZnT77C - chr3L_13_20480001 chr3L_20480001 RAL-911 1259 chr3L 20525228 20525228 chr3L 22908066 22908067 6 2382838 6.5 22.0 14.2 0.4 2382839 chr3L 20525228 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_6_21715001 chr3L_21715001 RAL-911 1260 chr3L 20525228 20525228 chr3L 24821492 24821493 4 4296264 6.5 6.0 6.2 0.6 4296265 chr3L 20525228 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821493 intergenic not near genes chr3L_4_22670001 chr3L_22670001 RAL-911 1261 chr3L 20525229 20525229 chr3L 22908066 22908067 7 2382837 6.0 22.0 14.0 0.5 2382838 chr3L 20525229 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_7_21715001 chr3L_21715001 RAL-911 1262 chr3L 20548344 20548388 chr3L 20548453 20548496 9 106 5.0 2.0 3.5 2.0 152 chr3L 20548344 intergenic not near genes chr3L 20548420 intergenic not near genes chr3L 20548496 intergenic not near genes chr3L_9_20545001 chr3L_20545001 RAL-911 1263 chr3L 20858054 20858105 chr3L 20858173 20858224 14 118 4.0 4.0 4.0 2.8 170 chr3L 20858054 intron CG32432 - chr3L 20858139 intron CG32432 - chr3L 20858224 intron CG32432 - chr3L_14_20855001 chr3L_20855001 RAL-911 1264 chr3L 20886760 20886811 chr3L 20886901 20886946 8 136 2.5 0.0 1.2 3.6 186 chr3L 20886760 intergenic CR44686 - chr3L 20886853 intergenic CR44686 - chr3L 20886946 intergenic CR44686 - chr3L_8_20885001 chr3L_20885001 RAL-911 1265 chr3L 20913750 20913769 chr3L 20913831 20913845 4 79 2.0 1.0 1.5 1.6 95 chr3L 20913750 intergenic CR43930 - chr3L 20913798 intergenic CR43930 - chr3L 20913845 intergenic CR43930 - chr3L_4_20910001 chr3L_20910001 RAL-911 1266 chr3L 21082188 21082238 chr3L 21082286 21082324 15 94 5.0 5.0 5.0 2.5 136 chr3L 21082188 intron ko - chr3L 21082256 intron ko - chr3L 21082324 intron ko - chr3L_15_21080001 chr3L_21080001 RAL-911 1267 chr3L 21130549 21130598 chr3L 21130763 21130812 6 211 2.5 3.5 3.0 1.5 263 chr3L 21130549 intron ko - chr3L 21130680 intron ko - chr3L 21130812 5` UTR ko - chr3L_6_21130001 chr3L_21130001 RAL-911 1268 chr3L 21151854 21151891 chr3L 21156948 21156995 flea 7 5102 1.0 6.0 3.5 1.6 5141 chr3L 21151854 intron Ac78C - chr3L 21154424 intron Ac78C - chr3L 21156995 intron Ac78C - chr3L_7_21150001 chr3L_21150001 RAL-911 1269 chr3L 21301714 21301758 chr3L 21301820 21301864 6 102 3.0 1.5 2.2 1.9 150 chr3L 21301714 5` UTR CR45432 + chr3L 21301789 5` UTR,3` UTR CR45432 +,CG11309 - chr3L 21301864 5` UTR,3` UTR CR45432 +,CG11309 - chr3L_6_21300001 chr3L_21300001 RAL-911 1270 chr3L 21306131 21306178 chr3L 21315308 21315351 roo 15 9177 3.0 2.5 2.8 3.9 9220 chr3L 21306131 3` UTR CG7632 + chr3L 21310741 intron Pc - chr3L 21315351 3` UTR Pc - chr3L_15_21310001 chr3L_21310001 RAL-911 1271 chr3L 21319523 21319548 chr3L 21319623 21319658 7 106 3.0 1.5 2.2 2.2 135 chr3L 21319523 5` UTR Rab26 + chr3L 21319590 5` UTR Rab26 + chr3L 21319658 5` UTR Rab26 + chr3L_7_21315001 chr3L_21315001 RAL-911 1272 chr3L 21362836 21362879 chr3L 21362935 21362983 13 100 4.5 3.0 3.8 2.7 147 chr3L 21362836 intergenic not near genes chr3L 21362910 intergenic not near genes chr3L 21362983 intergenic not near genes chr3L_13_21360001 chr3L_21360001 RAL-911 1273 chr3L 21372703 21372715 chr3L 21379231 21379243 McClintock 4 6526 7.0 3.5 5.2 0.6 6540 chr3L 21372703 intergenic not near genes chr3L 21375973 intergenic not near genes chr3L 21379243 intergenic not near genes chr3L_4_21375001 chr3L_21375001 RAL-911 1274 chr3L 21372716 21372729 chr3L 21379229 21379255 McClintock 8 6526 6.5 3.5 5.0 1.3 6539 chr3L 21372716 intergenic not near genes chr3L 21375986 intergenic not near genes chr3L 21379255 intergenic not near genes chr3L_8_21375001 chr3L_21375001 RAL-911 1275 chr3L 21406989 21407026 chr3L 21407088 21407125 4 99 2.0 2.5 2.2 1.2 136 chr3L 21406989 intron rgn + chr3L 21407057 intron rgn + chr3L 21407125 intron rgn + chr3L_4_21405001 chr3L_21405001 RAL-911 1276 chr3L 16736385 16736393 chr3L 21448026 21448026 4 4711637 1.0 9.5 5.2 0.6 4711641 chr3L 16736385 intron CG9701 + chr3L 19092206 intergenic MESR6 + chr3L 21448026 3` UTR Syx7 + chr3L_4_19090001 chr3L_19090001 RAL-911 1277 chr3L 211655 211655 chr3L 21448027 21448027 4 21236372 12.5 9.5 11.0 0.3 21236372 chr3L 211655 3` UTR thoc7 - chr3L 10829841 intergenic not near genes chr3L 21448027 3` UTR Syx7 + chr3L_4_10825001 chr3L_10825001 RAL-911 1278 chr3L 4341332 4341335 chr3L 21448027 21448027 14 17106695 12.5 9.5 11.0 1.2 17106695 chr3L 4341332 intron Cip4 - chr3L 12894680 3` UTR CG14118 + chr3L 21448027 3` UTR Syx7 + chr3L_14_12890001 chr3L_12890001 RAL-911 1279 chr3L 11263081 11263081 chr3L 21448027 21448027 5 10184946 9.5 9.5 9.5 0.5 10184946 chr3L 11263081 intergenic not near genes chr3L 16355554 intron CG45057 - chr3L 21448027 3` UTR Syx7 + chr3L_5_16355001 chr3L_16355001 RAL-911 1280 chr3L 16736391 16736392 chr3L 21448027 21448027 4 4711635 1.0 9.5 5.2 0.6 4711636 chr3L 16736391 intron CG9701 + chr3L 19092209 intergenic MESR6 + chr3L 21448027 3` UTR Syx7 + chr3L_4_19090001 chr3L_19090001 RAL-911 1281 chr3L 21649770 21649803 chr3L 21650010 21650028 6 237 0.5 3.5 2.0 2.0 258 chr3L 21649770 intron CG43980 + chr3L 21649899 intron CG43980 + chr3L 21650028 intron CG43980 + chr3L_6_21645001 chr3L_21645001 RAL-911 1282 chr3L 21653513 21653532 chr3L 21653605 21653630 4 96 3.0 1.0 2.0 1.3 117 chr3L 21653513 intron CG43980 + chr3L 21653572 intron CG43980 + chr3L 21653630 intron CG43980 + chr3L_4_21650001 chr3L_21650001 RAL-911 1283 chr3L 21769032 21769086 chr3L 21769139 21769193 19 106 1.5 2.5 2.0 6.3 161 chr3L 21769032 intron,intron Syn1 -,CG42689 + chr3L 21769112 intron,intron Syn1 -,CG42689 + chr3L 21769193 intron,intron Syn1 -,CG42689 + chr3L_19_21765001 chr3L_21765001 RAL-911 1284 chr3L 21770025 21770034 chr3L 21770128 21770131 4 103 4.5 3.5 4.0 0.8 106 chr3L 21770025 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770078 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770131 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L_4_21770001 chr3L_21770001 RAL-911 1285 chr3L 21776668 21776699 chr3L 21776775 21776798 4 105 0.5 2.5 1.5 1.6 130 chr3L 21776668 intron,intron CG42689 +,CG42552 + chr3L 21776733 intron,intron CG42689 +,CG42552 + chr3L 21776798 intron,intron CG42689 +,CG42552 + chr3L_4_21775001 chr3L_21775001 RAL-911 1286 chr3L 21798752 21798796 chr3L 21798861 21798904 8 107 3.0 3.5 3.2 1.9 152 chr3L 21798752 intergenic not near genes chr3L 21798828 intergenic not near genes chr3L 21798904 intergenic not near genes chr3L_8_21795001 chr3L_21795001 RAL-911 1287 chr3L 21799854 21799864 chr3L 21799935 21799971 4 101 3.5 3.5 3.5 0.9 117 chr3L 21799854 intergenic not near genes chr3L 21799912 intergenic not near genes chr3L 21799971 intergenic not near genes chr3L_4_21795001 chr3L_21795001 RAL-911 1288 chr3L 21975659 21975704 chr3L 21975913 21975948 12 246 4.5 2.5 3.5 2.7 289 chr3L 21975659 intron CG7470 + chr3L 21975804 intron CG7470 + chr3L 21975948 intron CG7470 + chr3L_12_21975001 chr3L_21975001 RAL-911 1289 chr3L 22033692 22033723 chr3L 22033768 22033821 10 93 2.5 1.5 2.0 3.3 129 chr3L 22033692 intergenic not near genes chr3L 22033756 intergenic not near genes chr3L 22033821 intergenic not near genes chr3L_10_22030001 chr3L_22030001 RAL-911 1290 chr3L 22085139 22085161 chr3L 22085590 22085590 4 446 3.5 3.0 3.2 1.0 451 chr3L 22085139 intergenic not near genes chr3L 22085364 intergenic not near genes chr3L 22085590 intergenic not near genes chr3L_4_22085001 chr3L_22085001 RAL-911 1291 chr3L 22099664 22099705 chr3L 22105863 22105911 3S18 16 6205 3.5 8.0 5.8 2.4 6247 chr3L 22099664 intergenic not near genes chr3L 22102788 intergenic not near genes chr3L 22105911 intergenic not near genes chr3L_16_22100001 chr3L_22100001 RAL-911 1292 chr3L 22130479 22130516 chr3L 22130645 22130682 7 166 1.5 1.5 1.5 2.8 203 chr3L 22130479 intergenic not near genes chr3L 22130580 intergenic not near genes chr3L 22130682 intergenic not near genes chr3L_7_22130001 chr3L_22130001 RAL-911 1293 chr3L 22255885 22255929 chr3L 22255985 22256020 10 95 3.0 2.0 2.5 2.9 135 chr3L 22255885 intergenic not near genes chr3L 22255952 intergenic not near genes chr3L 22256020 intergenic not near genes chr3L_10_22255001 chr3L_22255001 RAL-911 1294 chr3L 22366698 22366737 chr3L 22366788 22366827 7 95 0.5 2.5 1.5 2.8 129 chr3L 22366698 intron Ten-m - chr3L 22366762 intron Ten-m - chr3L 22366827 intron Ten-m - chr3L_7_22365001 chr3L_22365001 RAL-911 1295 chr3L 22475963 22476016 chr3L 22476317 22476347 11 350 2.5 0.5 1.5 4.4 384 chr3L 22475963 intergenic CG11425 + chr3L 22476155 intergenic CG11425 + chr3L 22476347 intergenic not near genes chr3L_11_22475001 chr3L_22475001 RAL-911 1296 chr3L 22555776 22555798 chr3L 22563243 22563265 blood 5 7472 4.0 0.0 2.0 1.7 7489 chr3L 22555776 intergenic not near genes chr3L 22559520 intergenic not near genes chr3L 22563265 intergenic not near genes chr3L_5_22555001 chr3L_22555001 RAL-911 1297 chr3L 22617175 22617219 chr3L 22624647 22624691 blood 10 7471 2.0 1.5 1.8 3.6 7516 chr3L 22617175 intron CG14459 - chr3L 22620933 intron CG14459 - chr3L 22624691 intron CG14459 - chr3L_10_22620001 chr3L_22620001 RAL-911 1298 chr3L 22682227 22682243 chr3L 22682319 22682363 4 107 1.0 4.5 2.8 1.1 136 chr3L 22682227 intergenic not near genes chr3L 22682295 intergenic not near genes chr3L 22682363 intergenic not near genes chr3L_4_22680001 chr3L_22680001 RAL-911 1299 chr3L 22761373 22761408 chr3L 22766826 22766855 Ivk 11 5450 5.0 4.5 4.8 1.9 5482 chr3L 22761373 intron SPoCk + chr3L 22764114 intron SPoCk + chr3L 22766855 intron SPoCk + chr3L_11_22760001 chr3L_22760001 RAL-911 1300 chr3L 22853450 22853722 chr3L 22853551 22853809 13 97 0.5 4.5 2.5 3.7 359 chr3L 22853450 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853630 5` UTR CR43426 + chr3L 22853809 5` UTR CR43426 + chr3L_13_22850001 chr3L_22850001 RAL-911 1301 chr3L 22865974 22866001 chr3L 22867127 22867153 Doc 7 1152 4.5 6.0 5.2 1.1 1179 chr3L 22865974 intron CG33170 + chr3L 22866564 intron CG33170 + chr3L 22867153 intron CG33170 + chr3L_7_22865001 chr3L_22865001 RAL-911 1302 chr3L 22881804 22881852 chr3L 22882183 22882229 12 374 5.0 5.5 5.2 1.9 425 chr3L 22881804 intron slif + chr3L 22882016 intron slif + chr3L 22882229 intron slif + chr3L_12_22880001 chr3L_22880001 RAL-911 1303 chr3L 22897199 22897218 chr3L 22897281 22897321 4 98 1.0 1.0 1.0 2.0 122 chr3L 22897199 intergenic not near genes chr3L 22897260 intergenic not near genes chr3L 22897321 intergenic not near genes chr3L_4_22895001 chr3L_22895001 RAL-911 1304 chr3L 19220633 19220636 chr3L 22908066 22908066 23 3687432 11.0 22.0 16.5 1.3 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_23_21060001 chr3L_21060001 RAL-911 1305 chr3L 20525228 20525230 chr3L 22908066 22908066 13 2382837 6.0 22.0 14.0 0.9 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_13_21715001 chr3L_21715001 RAL-911 1306 chr3L 22908066 22908066 chr3L 24821492 24821494 10 1913427 22.0 6.0 14.0 0.7 1913428 chr3L 22908066 intergenic not near genes chr3L 23864780 intron CG40470 - chr3L 24821494 intergenic not near genes chr3L_10_23860001 chr3L_23860001 RAL-911 1307 chr3L 22909022 22909053 chr3L 22909110 22909122 8 95 4.0 3.0 3.5 1.8 100 chr3L 22909022 intergenic CR45661 + chr3L 22909072 intergenic CR45661 + chr3L 22909122 intergenic CR45661 + chr3L_8_22905001 chr3L_22905001 RAL-911 1308 chr3L 22924927 22924959 chr3L 22925023 22925057 5 91 2.0 0.5 1.2 2.3 130 chr3L 22924927 intergenic not near genes chr3L 22924992 intergenic not near genes chr3L 22925057 intergenic not near genes chr3L_5_22920001 chr3L_22920001 RAL-911 1309 chr3L 22989873 22989892 chr3L 22996838 22996886 297 5 6986 2.0 2.5 2.2 1.6 7013 chr3L 22989873 intergenic not near genes chr3L 22993380 intergenic not near genes chr3L 22996886 intergenic not near genes chr3L_5_22990001 chr3L_22990001 RAL-911 1310 chr3L 23913421 23913475 chr3L 23913532 23913551 11 104 1.0 4.5 2.8 2.9 130 chr3L 23913421 intron CG40470 - chr3L 23913486 intron CG40470 - chr3L 23913551 intron CG40470 - chr3L_11_23910001 chr3L_23910001 RAL-911 1311 chr3L 24021256 24021313 chr3L 24022433 24022466 1360 9 1172 3.0 5.0 4.0 1.8 1210 chr3L 24021256 intergenic not near genes chr3L 24021861 intergenic not near genes chr3L 24022466 intergenic not near genes chr3L_9_24020001 chr3L_24020001 RAL-911 1312 chr3L 18198930 18198930 chr3L 24821492 24821492 8 6622562 12.5 6.0 9.2 0.8 6622562 chr3L 18198930 intergenic not near genes chr3L 21510211 intron M6 + chr3L 24821492 intergenic not near genes chr3L_8_21510001 chr3L_21510001 RAL-911 1313 chr3L 20525229 20525230 chr3L 24821492 24821492 5 4296262 6.0 6.0 6.0 0.7 4296263 chr3L 20525229 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821492 intergenic not near genes chr3L_5_22670001 chr3L_22670001 RAL-911 1314 chr3L 18198930 18198931 chr3L 24821493 24821493 6 6622562 13.5 6.0 9.8 0.6 6622563 chr3L 18198930 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821493 intergenic not near genes chr3L_6_21510001 chr3L_21510001 RAL-911 1315 chr3L 20525228 20525230 chr3L 24821493 24821493 9 4296263 6.0 6.0 6.0 1.3 4296265 chr3L 20525228 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821493 intergenic not near genes chr3L_9_22670001 chr3L_22670001 RAL-911 1316 chr3L 18198931 18198931 chr3L 24821494 24821494 5 6622563 13.5 6.0 9.8 0.5 6622563 chr3L 18198931 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_5_21510001 chr3L_21510001 RAL-911 1317 chr3L 25512792 25512804 chr3L 25512883 25512902 5 92 2.5 3.0 2.8 1.3 110 chr3L 25512792 intron CG41343 - chr3L 25512847 intron CG41343 - chr3L 25512902 intron CG41343 - chr3L_5_25510001 chr3L_25510001 RAL-911 1318 chr3L 25513557 25513609 chr3L 25513656 25513669 7 80 0.0 3.0 1.5 2.8 112 chr3L 25513557 intron CG41343 - chr3L 25513613 intron CG41343 - chr3L 25513669 intron CG41343 - chr3L_7_25510001 chr3L_25510001 RAL-911 1319 chr3L 25514854 25514871 chr3L 25514966 25514971 4 109 1.0 1.5 1.2 1.8 117 chr3L 25514854 intron CG41343 - chr3L 25514912 intron CG41343 - chr3L 25514971 intron CG41343 - chr3L_4_25510001 chr3L_25510001 RAL-911 1320 chr3L 25842480 25842497 chr3L 25842580 25842603 4 100 2.0 8.0 5.0 0.7 123 chr3L 25842480 intron CG40178 - chr3L 25842542 intron CG40178 - chr3L 25842603 intron CG40178 - chr3L_4_25840001 chr3L_25840001 RAL-911 1321 chr3L 26009453 26009456 chr3L 26009536 26009552 4 96 1.0 5.5 3.2 1.0 99 chr3L 26009453 intron CG40178 - chr3L 26009502 intron CG40178 - chr3L 26009552 intron CG40178 - chr3L_4_26005001 chr3L_26005001 RAL-911 1322 chr3L 26694940 26694956 chr3L 26695010 26695056 4 90 1.0 1.0 1.0 2.0 116 chr3L 26694940 intergenic not near genes chr3L 26694998 intergenic not near genes chr3L 26695056 intergenic not near genes chr3L_4_26690001 chr3L_26690001 RAL-911 1323 chr3L 27167933 27167979 chr3L 27168065 27168077 8 116 2.0 1.5 1.8 2.9 144 chr3L 27167933 intergenic not near genes chr3L 27168005 intergenic not near genes chr3L 27168077 intergenic not near genes chr3L_8_27165001 chr3L_27165001 RAL-911 1324 chr3L 27356101 27356108 chr3L 27357320 27357322 1360 5 1217 5.5 5.5 5.5 0.8 1221 chr3L 27356101 intron Dbp80 + chr3L 27356712 intron Dbp80 + chr3L 27357322 intron Dbp80 + chr3L_5_27355001 chr3L_27355001 RAL-911 1325 chr3L 27980682 27980692 chr3L 27985500 27985510 Doc 6 4818 5.5 6.0 5.8 0.9 4828 chr3L 27980682 intron CG17514 - chr3L 27983096 intron CG17514 - chr3L 27985510 intron CG17514 - chr3L_6_27980001 chr3L_27980001 RAL-911 1326 chr3R 97110 97113 chr3R 99846 99850 10 2736 12.5 15.0 13.8 0.7 2740 chr3R 97110 intergenic not near genes chr3R 98480 intergenic not near genes chr3R 99850 intergenic not near genes chr3R_10_95001 chr3R_95001 RAL-911 1327 chr3R 1021761 1021801 chr3R 1022002 1022050 10 237 13.5 16.0 14.8 0.6 289 chr3R 1021761 intergenic not near genes chr3R 1021906 intergenic not near genes chr3R 1022050 intergenic not near genes chr3R_10_1020001 chr3R_1020001 RAL-911 1328 chr3R 1062366 1062407 chr3R 1062544 1062585 9 177 2.5 2.0 2.2 2.8 219 chr3R 1062366 intron CG15831 + chr3R 1062476 intron CG15831 + chr3R 1062585 intron CG15831 + chr3R_9_1060001 chr3R_1060001 RAL-911 1329 chr3R 1939033 1939082 chr3R 1939145 1939196 5 113 2.5 1.0 1.8 1.8 163 chr3R 1939033 intergenic not near genes chr3R 1939114 intergenic not near genes chr3R 1939196 intergenic not near genes chr3R_5_1935001 chr3R_1935001 RAL-911 1330 chr3R 3752722 3752759 chr3R 3752822 3752862 4 95 2.0 1.0 1.5 1.6 140 chr3R 3752722 intergenic CG41128 + chr3R 3752792 intergenic CG41128 + chr3R 3752862 intergenic not near genes chr3R_4_3750001 chr3R_3750001 RAL-911 1331 chr3R 3848041 3848049 chr3R 3848162 3848170 5 121 6.5 2.0 4.2 1.0 129 chr3R 3848041 intron CG41099 + chr3R 3848106 intron CG41099 + chr3R 3848170 intron CG41099 + chr3R_5_3845001 chr3R_3845001 RAL-911 1332 chr3R 4105021 4105066 chr3R 4110245 4110280 copia 10 5220 3.5 1.5 2.5 2.9 5259 chr3R 4105021 intergenic not near genes chr3R 4107650 intergenic not near genes chr3R 4110280 intergenic not near genes chr3R_10_4105001 chr3R_4105001 RAL-911 1333 chr3R 4132880 4132929 chr3R 4133054 4133102 12 172 3.0 4.0 3.5 2.7 222 chr3R 4132880 intron Gfat1 + chr3R 4132991 intron Gfat1 + chr3R 4133102 intron Gfat1 + chr3R_12_4130001 chr3R_4130001 RAL-911 1334 chr3R 4206057 4206100 chr3R 4211652 4211682 mdg3 9 5590 3.5 4.5 4.0 1.8 5625 chr3R 4206057 intron CG14636 - chr3R 4208870 intron CG14636 - chr3R 4211682 intron CG14636 - chr3R_9_4205001 chr3R_4205001 RAL-911 1335 chr3R 4366742 4366751 chr3R 4375145 4375154 roo 4 8403 9.5 2.5 6.0 0.6 8412 chr3R 4366742 3` UTR CG1090 + chr3R 4370948 intergenic not near genes chr3R 4375154 5` UTR CR44922 + chr3R_4_4370001 chr3R_4370001 RAL-911 1336 chr3R 4366753 4366788 chr3R 4375140 4375191 roo 10 8398 4.0 1.5 2.8 2.6 8438 chr3R 4366753 3` UTR CG1090 + chr3R 4370972 intergenic not near genes chr3R 4375191 5` UTR CR44922 + chr3R_10_4370001 chr3R_4370001 RAL-911 1337 chr3R 4408397 4408444 chr3R 4412716 4412716 Juan 7 4310 10.5 7.5 9.0 0.7 4319 chr3R 4408397 intron CG32944 - chr3R 4410556 intron CG32944 - chr3R 4412716 intron CG32944 - chr3R_7_4410001 chr3R_4410001 RAL-911 1338 chr3R 4512378 4512387 chr3R 4512609 4512618 4 231 5.5 0.5 3.0 1.0 240 chr3R 4512378 intron CG34357 - chr3R 4512498 intron CG34357 - chr3R 4512618 intron CG34357 - chr3R_4_4510001 chr3R_4510001 RAL-911 1339 chr3R 4609528 4609583 chr3R 4610712 4610731 1360 19 1178 5.0 4.5 4.8 3.3 1203 chr3R 4609528 intergenic not near genes chr3R 4610130 intergenic not near genes chr3R 4610731 intergenic not near genes chr3R_19_4610001 chr3R_4610001 RAL-911 1340 chr3R 4625296 4625348 chr3R 4625702 4625734 9 400 2.0 1.5 1.8 3.2 438 chr3R 4625296 intron 5-HT2A + chr3R 4625515 intron 5-HT2A + chr3R 4625734 intron 5-HT2A + chr3R_9_4625001 chr3R_4625001 RAL-911 1341 chr3R 4680695 4680741 chr3R 4680784 4680834 16 95 5.0 3.0 4.0 3.2 139 chr3R 4680695 intron CG43427 + chr3R 4680764 intron CG43427 + chr3R 4680834 5` UTR CG43427 + chr3R_16_4680001 chr3R_4680001 RAL-911 1342 chr3R 4733654 4733706 chr3R 4733798 4733850 14 141 4.5 0.5 2.5 4.0 196 chr3R 4733654 intergenic not near genes chr3R 4733752 intergenic not near genes chr3R 4733850 intergenic not near genes chr3R_14_4730001 chr3R_4730001 RAL-911 1343 chr3R 4753224 4753279 chr3R 4757547 4757555 F-element 8 4307 1.5 2.5 2.0 2.7 4331 chr3R 4753224 intron,intron atms +,CG44098 - chr3R 4755390 intron,intron atms +,CG44098 - chr3R 4757555 intron,exon atms +,CG44098 - chr3R_8_4755001 chr3R_4755001 RAL-911 1344 chr3R 4861558 4861594 chr3R 4861658 4861660 4 84 2.0 2.0 2.0 1.3 102 chr3R 4861558 intron opa + chr3R 4861609 intron opa + chr3R 4861660 intron opa + chr3R_4_4860001 chr3R_4860001 RAL-911 1345 chr3R 4887458 4887495 chr3R 4894854 4894857 rover 4 7382 1.5 1.5 1.5 1.6 7399 chr3R 4887458 intergenic not near genes chr3R 4891158 intergenic not near genes chr3R 4894857 intergenic not near genes chr3R_4_4890001 chr3R_4890001 RAL-911 1346 chr3R 4896274 4896313 chr3R 4896387 4896426 11 108 5.5 2.5 4.0 2.2 152 chr3R 4896274 intergenic CR45580 + chr3R 4896350 intergenic CR45580 + chr3R 4896426 5` UTR CR45580 + chr3R_11_4895001 chr3R_4895001 RAL-911 1347 chr3R 4905030 4905047 chr3R 4905160 4905202 7 136 1.0 3.5 2.2 2.2 172 chr3R 4905030 intergenic not near genes chr3R 4905116 intergenic not near genes chr3R 4905202 intergenic not near genes chr3R_7_4905001 chr3R_4905001 RAL-911 1348 chr3R 4922324 4922344 chr3R 4922422 4922443 7 99 7.0 0.0 3.5 1.6 119 chr3R 4922324 intron Cdep + chr3R 4922384 intron Cdep + chr3R 4922443 intron Cdep + chr3R_7_4920001 chr3R_4920001 RAL-911 1349 chr3R 4943598 4943623 chr3R 4943722 4943732 6 122 4.5 0.5 2.5 1.7 134 chr3R 4943598 intron Cdep + chr3R 4943665 intron Cdep + chr3R 4943732 intron Cdep + chr3R_6_4940001 chr3R_4940001 RAL-911 1350 chr3R 4975916 4975950 chr3R 4976037 4976071 9 120 2.0 1.5 1.8 3.2 155 chr3R 4975916 intergenic not near genes chr3R 4975994 intergenic not near genes chr3R 4976071 intergenic not near genes chr3R_9_4975001 chr3R_4975001 RAL-911 1351 chr3R 5045826 5045869 chr3R 5052948 5052991 HMS-Beagle 9 7122 4.0 2.0 3.0 2.2 7165 chr3R 5045826 3` UTR CR43635 - chr3R 5049408 intergenic not near genes chr3R 5052991 intergenic CR45588 - chr3R_9_5045001 chr3R_5045001 RAL-911 1352 chr3R 5067962 5068013 chr3R 5073499 5073547 mdg3 26 5535 4.0 3.5 3.8 5.4 5585 chr3R 5067962 intergenic not near genes chr3R 5070754 intergenic not near genes chr3R 5073547 intergenic not near genes chr3R_26_5070001 chr3R_5070001 RAL-911 1353 chr3R 5278090 5278097 chr3R 5278179 5278197 6 96 5.5 4.5 5.0 1.0 107 chr3R 5278090 intron mtd - chr3R 5278144 intron mtd - chr3R 5278197 intron mtd - chr3R_6_5275001 chr3R_5275001 RAL-911 1354 chr3R 5278098 5278114 chr3R 5278174 5278202 6 93 4.5 3.5 4.0 1.2 104 chr3R 5278098 intron mtd - chr3R 5278150 intron mtd - chr3R 5278202 intron mtd - chr3R_6_5275001 chr3R_5275001 RAL-911 1355 chr3R 5338380 5338427 chr3R 5343577 5343598 Rt1c 7 5192 4.0 2.5 3.2 1.7 5218 chr3R 5338380 intron mtd - chr3R 5340989 intron mtd - chr3R 5343598 intron mtd - chr3R_7_5340001 chr3R_5340001 RAL-911 1356 chr3R 5385138 5385152 chr3R 5385337 5385342 4 195 3.0 4.0 3.5 0.9 204 chr3R 5385138 exon kkv - chr3R 5385240 intron kkv - chr3R 5385342 intron kkv - chr3R_4_5385001 chr3R_5385001 RAL-911 1357 chr3R 5385155 5385176 chr3R 5385324 5385359 4 188 0.5 3.0 1.8 1.4 204 chr3R 5385155 exon kkv - chr3R 5385257 intron kkv - chr3R 5385359 intron kkv - chr3R_4_5385001 chr3R_5385001 RAL-911 1358 chr3R 5445961 5445984 chr3R 5452430 5452464 Burdock 7 6478 4.0 4.5 4.2 1.3 6503 chr3R 5445961 intron CG14669 + chr3R 5449212 intron CG14669 + chr3R 5452464 intron CG14669 + chr3R_7_5445001 chr3R_5445001 RAL-911 1359 chr3R 5480226 5480235 chr3R 5480322 5480331 5 96 6.5 7.0 6.8 0.6 105 chr3R 5480226 intron,3` UTR Hcs +,ksr - chr3R 5480278 intron,3` UTR Hcs +,ksr - chr3R 5480331 intron,3` UTR Hcs +,ksr - chr3R_5_5480001 chr3R_5480001 RAL-911 1360 chr3R 5696132 5696144 chr3R 5696230 5696260 4 104 1.5 2.5 2.0 1.3 128 chr3R 5696132 intron plx + chr3R 5696196 intron plx + chr3R 5696260 intron plx + chr3R_4_5695001 chr3R_5695001 RAL-911 1361 chr3R 5712062 5712114 chr3R 5712170 5712222 5 108 2.5 2.0 2.2 1.6 160 chr3R 5712062 3` UTR plx + chr3R 5712142 3` UTR plx + chr3R 5712222 3` UTR plx + chr3R_5_5710001 chr3R_5710001 RAL-911 1362 chr3R 5726072 5726124 chr3R 5726254 5726267 19 178 4.0 5.0 4.5 3.5 195 chr3R 5726072 intergenic not near genes chr3R 5726170 intergenic not near genes chr3R 5726267 intergenic not near genes chr3R_19_5725001 chr3R_5725001 RAL-911 1363 chr3R 5745996 5746038 chr3R 5746257 5746299 pogo 4 258 2.5 2.5 2.5 1.1 303 chr3R 5745996 3` UTR Madm + chr3R 5746148 3` UTR Madm + chr3R 5746299 3` UTR Madm + chr3R_4_5745001 chr3R_5745001 RAL-911 1364 chr3R 5746996 5747032 chr3R 5753207 5753243 diver 12 6208 3.5 4.5 4.0 2.4 6247 chr3R 5746996 intergenic Madm + chr3R 5750120 intergenic not near genes chr3R 5753243 intergenic CG2091 - chr3R_12_5750001 chr3R_5750001 RAL-911 1365 chr3R 5809094 5809142 chr3R 5809355 5809398 pogo 11 256 2.5 5.5 4.0 2.2 304 chr3R 5809094 3` UTR CG11000 + chr3R 5809246 3` UTR CG11000 + chr3R 5809398 3` UTR CG11000 + chr3R_11_5805001 chr3R_5805001 RAL-911 1366 chr3R 5822367 5822403 chr3R 5823554 5823590 1360 8 1185 5.5 0.5 3.0 2.0 1223 chr3R 5822367 3` UTR CG2023 - chr3R 5822978 3` UTR CG2023 - chr3R 5823590 3` UTR CG2023 - chr3R_8_5820001 chr3R_5820001 RAL-911 1367 chr3R 5927570 5927572 chr3R 5927801 5927826 pogo 4 251 5.0 4.0 4.5 0.7 256 chr3R 5927570 intron CG34113 - chr3R 5927698 intron CG34113 - chr3R 5927826 intron CG34113 - chr3R_4_5925001 chr3R_5925001 RAL-911 1368 chr3R 6012637 6012641 chr3R 6012735 6012739 5 97 8.5 3.5 6.0 0.7 102 chr3R 6012637 intergenic not near genes chr3R 6012688 intergenic not near genes chr3R 6012739 intergenic not near genes chr3R_5_6010001 chr3R_6010001 RAL-911 1369 chr3R 6012642 6012678 chr3R 6012733 6012776 12 94 3.0 3.5 3.2 2.9 134 chr3R 6012642 intergenic not near genes chr3R 6012709 intergenic not near genes chr3R 6012776 intergenic not near genes chr3R_12_6010001 chr3R_6010001 RAL-911 1370 chr3R 6080150 6080182 chr3R 6080250 6080293 8 110 1.0 2.0 1.5 3.2 143 chr3R 6080150 intergenic not near genes chr3R 6080222 intergenic not near genes chr3R 6080293 intergenic not near genes chr3R_8_6080001 chr3R_6080001 RAL-911 1371 chr3R 6119120 6119157 chr3R 6119220 6119263 11 105 2.5 3.0 2.8 2.9 143 chr3R 6119120 intergenic not near genes chr3R 6119192 intergenic not near genes chr3R 6119263 intergenic not near genes chr3R_11_6115001 chr3R_6115001 RAL-911 1372 chr3R 6175157 6175195 chr3R 6182447 6182487 HMS-Beagle2 7 7291 2.0 2.0 2.0 2.3 7330 chr3R 6175157 intergenic Osi1 + chr3R 6178822 intron CR45194 + chr3R 6182487 intergenic CR45194 + chr3R_7_6175001 chr3R_6175001 RAL-911 1373 chr3R 6191151 6191200 chr3R 6191251 6191300 11 97 2.5 5.5 4.0 2.2 149 chr3R 6191151 intron NPFR + chr3R 6191226 intron NPFR + chr3R 6191300 intron NPFR + chr3R_11_6190001 chr3R_6190001 RAL-911 1374 chr3R 6226615 6226643 chr3R 6226723 6226751 5 107 2.5 4.5 3.5 1.1 136 chr3R 6226615 intergenic not near genes chr3R 6226683 intergenic not near genes chr3R 6226751 intergenic not near genes chr3R_5_6225001 chr3R_6225001 RAL-911 1375 chr3R 6461557 6461612 chr3R 6461658 6461712 15 99 5.0 2.5 3.8 3.1 155 chr3R 6461557 intergenic not near genes chr3R 6461634 intergenic not near genes chr3R 6461712 intergenic not near genes chr3R_15_6460001 chr3R_6460001 RAL-911 1376 chr3R 6510014 6510042 chr3R 6515114 6515143 jockey 9 5100 5.5 2.0 3.8 1.9 5129 chr3R 6510014 intergenic not near genes chr3R 6512578 intergenic not near genes chr3R 6515143 intergenic not near genes chr3R_9_6510001 chr3R_6510001 RAL-911 1377 chr3R 6553002 6553040 chr3R 6553100 6553103 7 86 2.0 2.0 2.0 2.3 101 chr3R 6553002 intron dpr11 - chr3R 6553052 intron dpr11 - chr3R 6553103 intron dpr11 - chr3R_7_6550001 chr3R_6550001 RAL-911 1378 chr3R 6560761 6560779 chr3R 6560912 6560920 4 149 1.5 1.5 1.5 1.6 159 chr3R 6560761 intron dpr11 - chr3R 6560840 intron dpr11 - chr3R 6560920 intron dpr11 - chr3R_4_6560001 chr3R_6560001 RAL-911 1379 chr3R 6616853 6616891 chr3R 6616950 6616988 8 96 2.0 4.5 3.2 1.9 135 chr3R 6616853 intergenic not near genes chr3R 6616920 intergenic not near genes chr3R 6616988 intergenic not near genes chr3R_8_6615001 chr3R_6615001 RAL-911 1380 chr3R 6697293 6697312 chr3R 6697399 6697418 6 106 6.5 4.0 5.2 1.0 125 chr3R 6697293 intergenic not near genes chr3R 6697356 intergenic not near genes chr3R 6697418 intergenic not near genes chr3R_6_6695001 chr3R_6695001 RAL-911 1381 chr3R 6705666 6705712 chr3R 6705910 6705956 14 242 0.5 1.0 0.8 7.8 290 chr3R 6705666 intergenic not near genes chr3R 6705811 intergenic not near genes chr3R 6705956 intergenic not near genes chr3R_14_6705001 chr3R_6705001 RAL-911 1382 chr3R 6812062 6812105 chr3R 6812158 6812210 9 101 1.0 4.0 2.5 2.6 148 chr3R 6812062 intron CR42651 - chr3R 6812136 intron CR42651 - chr3R 6812210 intron CR42651 - chr3R_9_6810001 chr3R_6810001 RAL-911 1383 chr3R 6842758 6842812 chr3R 6842860 6842904 7 96 1.0 1.0 1.0 3.5 146 chr3R 6842758 intron Scr - chr3R 6842831 intron Scr - chr3R 6842904 intron Scr - chr3R_7_6840001 chr3R_6840001 RAL-911 1384 chr3R 6856364 6856397 chr3R 6856501 6856534 7 136 2.0 2.5 2.2 2.2 170 chr3R 6856364 intergenic not near genes chr3R 6856449 intergenic not near genes chr3R 6856534 intergenic not near genes chr3R_7_6855001 chr3R_6855001 RAL-911 1385 chr3R 6918060 6918091 chr3R 6918158 6918189 7 97 3.5 1.5 2.5 2.0 129 chr3R 6918060 intron Antp - chr3R 6918124 intron Antp - chr3R 6918189 intron Antp - chr3R_7_6915001 chr3R_6915001 RAL-911 1386 chr3R 6990482 6990494 chr3R 6990580 6990604 4 106 2.5 2.0 2.2 1.2 122 chr3R 6990482 intron Antp - chr3R 6990543 intron Antp - chr3R 6990604 intron Antp - chr3R_4_6990001 chr3R_6990001 RAL-911 1387 chr3R 6991174 6991203 chr3R 6991251 6991276 4 78 1.5 0.5 1.0 2.0 102 chr3R 6991174 intron Antp - chr3R 6991225 intron Antp - chr3R 6991276 intron Antp - chr3R_4_6990001 chr3R_6990001 RAL-911 1388 chr3R 7022249 7022290 chr3R 7022557 7022601 11 309 1.5 1.5 1.5 4.4 352 chr3R 7022249 intergenic not near genes chr3R 7022425 intergenic not near genes chr3R 7022601 intergenic not near genes chr3R_11_7020001 chr3R_7020001 RAL-911 1389 chr3R 7030682 7030727 chr3R 7030778 7030823 14 95 3.5 3.5 3.5 3.1 141 chr3R 7030682 intergenic not near genes chr3R 7030752 intergenic not near genes chr3R 7030823 intergenic not near genes chr3R_14_7030001 chr3R_7030001 RAL-911 1390 chr3R 7049528 7049571 chr3R 7049632 7049675 16 103 3.0 4.5 3.8 3.3 147 chr3R 7049528 intergenic not near genes chr3R 7049602 intergenic not near genes chr3R 7049675 intergenic not near genes chr3R_16_7045001 chr3R_7045001 RAL-911 1391 chr3R 7060234 7060285 chr3R 7060335 7060362 15 97 1.5 2.0 1.8 5.4 128 chr3R 7060234 3` UTR dj + chr3R 7060298 3` UTR dj + chr3R 7060362 3` UTR dj + chr3R_15_7060001 chr3R_7060001 RAL-911 1392 chr3R 7103309 7103313 chr3R 7103365 7103398 6 72 3.0 2.5 2.8 1.6 89 chr3R 7103309 intron Alh - chr3R 7103354 intron Alh - chr3R 7103398 intron Alh - chr3R_6_7100001 chr3R_7100001 RAL-911 1393 chr3R 7173658 7173706 chr3R 7173758 7173805 4 100 2.5 8.0 5.2 0.6 147 chr3R 7173658 intron sas + chr3R 7173732 intron sas + chr3R 7173805 intron sas + chr3R_4_7170001 chr3R_7170001 RAL-911 1394 chr3R 7187718 7187746 chr3R 7187826 7187854 8 108 3.0 5.0 4.0 1.6 136 chr3R 7187718 intron lap + chr3R 7187786 intron lap + chr3R 7187854 intron lap + chr3R_8_7185001 chr3R_7185001 RAL-911 1395 chr3R 7396366 7396380 chr3R 7396488 7396503 7 123 4.0 8.5 6.2 1.0 137 chr3R 7396366 intergenic not near genes chr3R 7396434 intergenic not near genes chr3R 7396503 intergenic not near genes chr3R_7_7395001 chr3R_7395001 RAL-911 1396 chr3R 7447971 7447989 chr3R 7448069 7448080 4 96 2.5 4.0 3.2 1.0 109 chr3R 7447971 intergenic not near genes chr3R 7448026 intergenic not near genes chr3R 7448080 intergenic not near genes chr3R_4_7445001 chr3R_7445001 RAL-911 1397 chr3R 7578719 7578759 chr3R 7578888 7578928 5 169 1.5 1.5 1.5 2.0 209 chr3R 7578719 intron CG34127 - chr3R 7578824 intron CG34127 - chr3R 7578928 intron CG34127 - chr3R_5_7575001 chr3R_7575001 RAL-911 1398 chr3R 7628288 7628326 chr3R 7628445 7628483 9 152 5.0 1.0 3.0 2.2 195 chr3R 7628288 intron CG34127 - chr3R 7628386 intron CG34127 - chr3R 7628483 intron CG34127 - chr3R_9_7625001 chr3R_7625001 RAL-911 1399 chr3R 7635637 7635684 chr3R 7635739 7635779 7 100 3.0 7.5 5.2 1.1 142 chr3R 7635637 intron CG34127 - chr3R 7635708 intron CG34127 - chr3R 7635779 intron CG34127 - chr3R_7_7635001 chr3R_7635001 RAL-911 1400 chr3R 7694557 7694607 chr3R 7713638 7713687 invader3 15 19081 5.0 2.5 3.8 3.1 19130 chr3R 7694557 3` UTR Nlg1 + chr3R 7704122 intergenic not near genes chr3R 7713687 intergenic not near genes chr3R_15_7700001 chr3R_7700001 RAL-911 1401 chr3R 7729472 7729498 chr3R 7737430 7737456 Stalker2 4 7954 1.5 8.5 5.0 0.7 7984 chr3R 7729472 intergenic not near genes chr3R 7733464 intergenic not near genes chr3R 7737456 intergenic not near genes chr3R_4_7730001 chr3R_7730001 RAL-911 1402 chr3R 7804931 7804963 chr3R 7805129 7805147 8 196 8.0 4.0 6.0 1.1 216 chr3R 7804931 3` UTR CG2993 - chr3R 7805039 3` UTR CG2993 - chr3R 7805147 3` UTR CG2993 - chr3R_8_7805001 chr3R_7805001 RAL-911 1403 chr3R 7973300 7973341 chr3R 7974382 7974423 1360 26 1082 4.5 5.5 5.0 4.3 1123 chr3R 7973300 intergenic not near genes chr3R 7973862 intergenic not near genes chr3R 7974423 3` UTR CD98hc - chr3R_26_7970001 chr3R_7970001 RAL-911 1404 chr3R 8090255 8090276 chr3R 8090452 8090473 7 197 5.0 2.5 3.8 1.5 218 chr3R 8090255 5` UTR CR44330 + chr3R 8090364 intergenic CR44330 + chr3R 8090473 intergenic CR44330 + chr3R_7_8090001 chr3R_8090001 RAL-911 1405 chr3R 8090277 8090298 chr3R 8090451 8090495 7 194 4.0 2.5 3.2 1.7 218 chr3R 8090277 5` UTR CR44330 + chr3R 8090386 intergenic CR44330 + chr3R 8090495 intergenic CR44330 + chr3R_7_8090001 chr3R_8090001 RAL-911 1406 chr3R 8094394 8094437 chr3R 8099719 8099762 Transpac 12 5325 3.0 3.5 3.2 2.9 5368 chr3R 8094394 intron CG7900 + chr3R 8097078 intron CG7900 + chr3R 8099762 intron CG7900 + chr3R_12_8095001 chr3R_8095001 RAL-911 1407 chr3R 8101762 8101768 chr3R 8104864 8104872 G2 4 3102 2.0 6.5 4.2 0.8 3110 chr3R 8101762 exon CG7900 + chr3R 8103317 intron CG7900 + chr3R 8104872 3` UTR CG7900 + chr3R_4_8100001 chr3R_8100001 RAL-911 1408 chr3R 8101779 8101790 chr3R 8104859 8104865 G2 4 3088 1.0 4.5 2.8 1.1 3086 chr3R 8101779 exon CG7900 + chr3R 8103322 intron CG7900 + chr3R 8104865 3` UTR CG7900 + chr3R_4_8100001 chr3R_8100001 RAL-911 1409 chr3R 8207541 8207581 chr3R 8208406 8208435 F-element 4 856 1.5 5.0 3.2 1.0 894 chr3R 8207541 intergenic not near genes chr3R 8207988 intergenic not near genes chr3R 8208435 intergenic not near genes chr3R_4_8205001 chr3R_8205001 RAL-911 1410 chr3R 8455603 8455643 chr3R 8455703 8455715 4 90 2.5 0.5 1.5 1.6 112 chr3R 8455603 intron CG45263 - chr3R 8455659 intron CG45263 - chr3R 8455715 intron CG45263 - chr3R_4_8455001 chr3R_8455001 RAL-911 1411 chr3R 8685288 8685292 chr3R 8685408 8685412 4 120 5.0 3.0 4.0 0.8 124 chr3R 8685288 intron CR44937 - chr3R 8685350 intron CR44937 - chr3R 8685412 intron CR44937 - chr3R_4_8685001 chr3R_8685001 RAL-911 1412 chr3R 8685293 8685314 chr3R 8685400 8685434 7 118 1.5 2.5 2.0 2.3 141 chr3R 8685293 intron CR44937 - chr3R 8685364 intron CR44937 - chr3R 8685434 intron CR44937 - chr3R_7_8685001 chr3R_8685001 RAL-911 1413 chr3R 8707346 8707384 chr3R 8709797 8709820 jockey 10 2453 2.0 2.0 2.0 3.3 2474 chr3R 8707346 intergenic not near genes chr3R 8708583 intergenic not near genes chr3R 8709820 intergenic not near genes chr3R_10_8705001 chr3R_8705001 RAL-911 1414 chr3R 8741607 8741622 chr3R 8741998 8742022 4 394 5.5 1.0 3.2 1.0 415 chr3R 8741607 intron CG9801 - chr3R 8741814 intron CG9801 - chr3R 8742022 intron CG9801 - chr3R_4_8740001 chr3R_8740001 RAL-911 1415 chr3R 8917872 8917912 chr3R 8917972 8918012 10 100 0.5 1.5 1.0 5.0 140 chr3R 8917872 intron pyd - chr3R 8917942 intron pyd - chr3R 8918012 intron pyd - chr3R_10_8915001 chr3R_8915001 RAL-911 1416 chr3R 8940111 8940153 chr3R 8940221 8940263 16 109 3.0 1.0 2.0 5.3 152 chr3R 8940111 intron skap + chr3R 8940187 intron skap + chr3R 8940263 intron skap + chr3R_16_8940001 chr3R_8940001 RAL-911 1417 chr3R 9036363 9036401 chr3R 9036461 9036486 13 96 8.0 7.5 7.8 1.5 123 chr3R 9036363 intron neur - chr3R 9036424 intron neur - chr3R 9036486 intron neur - chr3R_13_9035001 chr3R_9035001 RAL-911 1418 chr3R 9104459 9104498 chr3R 9104569 9104608 5 105 2.0 0.5 1.2 2.3 149 chr3R 9104459 intron pum - chr3R 9104534 intron pum - chr3R 9104608 intron pum - chr3R_5_9100001 chr3R_9100001 RAL-911 1419 chr3R 9108847 9108877 chr3R 9108943 9108973 7 96 4.0 1.5 2.8 1.8 126 chr3R 9108847 intron pum - chr3R 9108910 intron pum - chr3R 9108973 intron pum - chr3R_7_9105001 chr3R_9105001 RAL-911 1420 chr3R 9295009 9295050 chr3R 9295107 9295147 12 97 3.0 1.0 2.0 4.0 138 chr3R 9295009 3` UTR CG8861 - chr3R 9295078 3` UTR CG8861 - chr3R 9295147 3` UTR CG8861 - chr3R_12_9295001 chr3R_9295001 RAL-911 1421 chr3R 9319564 9319601 chr3R 9320019 9320045 jockey 6 453 3.0 7.5 5.2 1.0 481 chr3R 9319564 intron CG8861 - chr3R 9319804 intron CG8861 - chr3R 9320045 intron CG8861 - chr3R_6_9315001 chr3R_9315001 RAL-911 1422 chr3R 9324347 9324390 chr3R 9324670 9324713 9 323 5.0 1.0 3.0 2.2 366 chr3R 9324347 intron CG8861 - chr3R 9324530 intron CG8861 - chr3R 9324713 intron CG8861 - chr3R_9_9320001 chr3R_9320001 RAL-911 1423 chr3R 9330038 9330039 chr3R 18955051 18955052 4 9625013 12.0 15.0 13.5 0.3 9625014 chr3R 9330038 intron CG12951 - chr3R 14142545 intergenic not near genes chr3R 18955052 intron,intron CG42613 +,CG43732 + chr3R_4_14140001 chr3R_14140001 RAL-911 1424 chr3R 9361823 9361845 chr3R 9362067 9362106 pogo 5 258 2.5 5.0 3.8 1.0 283 chr3R 9361823 3` UTR CG45050 + chr3R 9361964 3` UTR CG45050 + chr3R 9362106 3` UTR CG45050 + chr3R_5_9360001 chr3R_9360001 RAL-911 1425 chr3R 9382810 9382837 chr3R 9382952 9382982 4 144 3.0 3.0 3.0 1.0 172 chr3R 9382810 intron FER - chr3R 9382896 intron FER - chr3R 9382982 intron FER - chr3R_4_9380001 chr3R_9380001 RAL-911 1426 chr3R 9434702 9434717 chr3R 9434821 9434836 4 119 9.5 2.5 6.0 0.6 134 chr3R 9434702 intron ps + chr3R 9434769 intron ps + chr3R 9434836 intron ps + chr3R_4_9430001 chr3R_9430001 RAL-911 1427 chr3R 9434718 9434742 chr3R 9434816 9434853 8 115 5.5 2.5 4.0 1.6 135 chr3R 9434718 intron ps + chr3R 9434786 intron ps + chr3R 9434853 intron ps + chr3R_8_9430001 chr3R_9430001 RAL-911 1428 chr3R 9578702 9578710 chr3R 9578775 9578776 4 70 5.5 9.0 7.2 0.5 74 chr3R 9578702 exon CG8273 + chr3R 9578739 exon CG8273 + chr3R 9578776 exon CG8273 + chr3R_4_9575001 chr3R_9575001 RAL-911 1429 chr3R 9611859 9611891 chr3R 9611961 9611993 10 102 7.0 0.0 3.5 2.2 134 chr3R 9611859 intron CG8312 + chr3R 9611926 intron CG8312 + chr3R 9611993 intron CG8312 + chr3R_10_9610001 chr3R_9610001 RAL-911 1430 chr3R 9732891 9732929 chr3R 9733099 9733138 12 207 2.0 2.5 2.2 3.8 247 chr3R 9732891 intron alphaTub85E - chr3R 9733014 intron alphaTub85E - chr3R 9733138 intron alphaTub85E - chr3R_12_9730001 chr3R_9730001 RAL-911 1431 chr3R 9779083 9779139 chr3R 9779190 9779196 4 82 5.5 1.5 3.5 0.9 113 chr3R 9779083 3` UTR RpS29 + chr3R 9779140 3` UTR RpS29 + chr3R 9779196 3` UTR RpS29 + chr3R_4_9775001 chr3R_9775001 RAL-911 1432 chr3R 9836851 9836880 chr3R 9836959 9836988 4 107 3.0 3.0 3.0 1.0 137 chr3R 9836851 intron Teh1 - chr3R 9836920 intron Teh1 - chr3R 9836988 intron Teh1 - chr3R_4_9835001 chr3R_9835001 RAL-911 1433 chr3R 10231770 10231808 chr3R 10237357 10237383 mdg3 9 5590 4.5 3.5 4.0 1.8 5613 chr3R 10231770 intron CG42795 + chr3R 10234576 intron CG42795 + chr3R 10237383 intron CG42795 + chr3R_9_10230001 chr3R_10230001 RAL-911 1434 chr3R 10255363 10255382 chr3R 10260823 10260842 I-element 4 5457 11.0 3.0 7.0 0.5 5479 chr3R 10255363 3` UTR Sirt6 - chr3R 10258102 intron Sirt6 - chr3R 10260842 exon Sirt6 - chr3R_4_10255001 chr3R_10255001 RAL-911 1435 chr3R 10306953 10306976 chr3R 10312192 10312243 11 5244 9.5 23.5 16.5 0.6 5290 chr3R 10306953 exon CG43143 + chr3R 10309598 exon CG6293 - chr3R 10312243 3` UTR Bruce - chr3R_11_10305001 chr3R_10305001 RAL-911 1436 chr3R 10403038 10403060 chr3R 10403139 10403159 4 100 4.0 7.5 5.8 0.6 121 chr3R 10403038 3` UTR CG6325 - chr3R 10403098 3` UTR CG6325 - chr3R 10403159 3` UTR CG6325 - chr3R_4_10400001 chr3R_10400001 RAL-911 1437 chr3R 10531856 10531895 chr3R 10531957 10531985 5 97 4.0 0.0 2.0 1.7 129 chr3R 10531856 intron hth - chr3R 10531920 intron hth - chr3R 10531985 intron hth - chr3R_5_10530001 chr3R_10530001 RAL-911 1438 chr3R 10535314 10535343 chr3R 10535427 10535456 7 111 3.5 0.5 2.0 2.3 142 chr3R 10535314 intron hth - chr3R 10535385 intron hth - chr3R 10535456 intron hth - chr3R_7_10535001 chr3R_10535001 RAL-911 1439 chr3R 10594577 10594624 chr3R 10594682 10594729 11 103 3.5 2.5 3.0 2.8 152 chr3R 10594577 intron hth - chr3R 10594653 intron hth - chr3R 10594729 intron hth - chr3R_11_10590001 chr3R_10590001 RAL-911 1440 chr3R 10627622 10627629 chr3R 10627750 10627757 6 128 3.5 4.0 3.8 1.2 135 chr3R 10627622 intergenic not near genes chr3R 10627690 intergenic not near genes chr3R 10627757 intergenic not near genes chr3R_6_10625001 chr3R_10625001 RAL-911 1441 chr3R 10723746 10723790 chr3R 10723854 10723880 10 108 3.0 0.5 1.8 3.6 134 chr3R 10723746 intergenic not near genes chr3R 10723813 intergenic not near genes chr3R 10723880 intergenic not near genes chr3R_10_10720001 chr3R_10720001 RAL-911 1442 chr3R 10732306 10732340 chr3R 10733198 10733232 7 891 1.5 1.5 1.5 2.8 926 chr3R 10732306 intergenic not near genes chr3R 10732769 intergenic not near genes chr3R 10733232 intergenic not near genes chr3R_7_10730001 chr3R_10730001 RAL-911 1443 chr3R 10817206 10817227 chr3R 10817309 10817326 4 102 10.0 7.0 8.5 0.4 120 chr3R 10817206 3` UTR CG4089 + chr3R 10817266 3` UTR CG4089 + chr3R 10817326 3` UTR CG4089 + chr3R_4_10815001 chr3R_10815001 RAL-911 1444 chr3R 10924791 10924829 chr3R 10924891 10924930 5 99 10.5 6.5 8.5 0.5 139 chr3R 10924791 intergenic not near genes chr3R 10924860 intergenic not near genes chr3R 10924930 intergenic not near genes chr3R_5_10920001 chr3R_10920001 RAL-911 1445 chr3R 10994266 10994309 chr3R 10994361 10994399 6 96 1.5 2.5 2.0 2.0 133 chr3R 10994266 intron CG34114 + chr3R 10994332 intron CG34114 + chr3R 10994399 intron CG34114 + chr3R_6_10990001 chr3R_10990001 RAL-911 1446 chr3R 11030050 11030095 chr3R 11030164 11030209 9 113 4.5 1.0 2.8 2.4 159 chr3R 11030050 intron CG34114 + chr3R 11030130 intron CG34114 + chr3R 11030209 intron CG34114 + chr3R_9_11030001 chr3R_11030001 RAL-911 1447 chr3R 11085455 11085489 chr3R 11085551 11085586 7 97 0.5 3.0 1.8 2.5 131 chr3R 11085455 3` UTR CR44940 - chr3R 11085520 intergenic CR44940 - chr3R 11085586 intergenic CR44940 - chr3R_7_11085001 chr3R_11085001 RAL-911 1448 chr3R 11099643 11099686 chr3R 11099795 11099837 4 148 2.5 2.0 2.2 1.2 194 chr3R 11099643 intergenic not near genes chr3R 11099740 intergenic not near genes chr3R 11099837 intergenic not near genes chr3R_4_11095001 chr3R_11095001 RAL-911 1449 chr3R 11103152 11103169 chr3R 11103254 11103266 5 101 0.0 0.0 0.0 5.0 114 chr3R 11103152 intergenic not near genes chr3R 11103209 intergenic not near genes chr3R 11103266 intergenic not near genes chr3R_5_11100001 chr3R_11100001 RAL-911 1450 chr3R 11140867 11140895 chr3R 11140969 11140997 9 102 2.0 9.0 5.5 1.4 130 chr3R 11140867 intergenic not near genes chr3R 11140932 intergenic not near genes chr3R 11140997 intergenic not near genes chr3R_9_11140001 chr3R_11140001 RAL-911 1451 chr3R 11151668 11151672 chr3R 11156541 11156545 5 4873 21.5 28.0 24.8 0.2 4877 chr3R 11151668 3` UTR Ugt86Di - chr3R 11154106 intergenic Ugt86Di - chr3R 11156545 intergenic Ugt86Dc + chr3R_5_11150001 chr3R_11150001 RAL-911 1452 chr3R 11151667 11151696 chr3R 11156548 11156578 9 4876 24.5 27.5 26.0 0.3 4911 chr3R 11151667 3` UTR Ugt86Di - chr3R 11154122 intergenic Ugt86Di - chr3R 11156578 intergenic Ugt86Dc + chr3R_9_11150001 chr3R_11150001 RAL-911 1453 chr3R 11263485 11263526 chr3R 11263588 11263628 5 103 1.5 1.0 1.2 2.3 143 chr3R 11263485 intergenic not near genes chr3R 11263556 intergenic not near genes chr3R 11263628 intergenic not near genes chr3R_5_11260001 chr3R_11260001 RAL-911 1454 chr3R 11269434 11269476 chr3R 11269579 11269621 4 142 5.5 1.0 3.2 1.0 187 chr3R 11269434 3` UTR CR31386 - chr3R 11269528 3` UTR CR31386 - chr3R 11269621 3` UTR CR31386 - chr3R_4_11265001 chr3R_11265001 RAL-911 1455 chr3R 11291435 11291474 chr3R 11291643 11291682 7 207 3.5 3.0 3.2 1.7 247 chr3R 11291435 intron CR31386 - chr3R 11291558 intron CR31386 - chr3R 11291682 intron CR31386 - chr3R_7_11290001 chr3R_11290001 RAL-911 1456 chr3R 11342522 11342554 chr3R 11342618 11342649 4 96 2.0 0.5 1.2 1.8 127 chr3R 11342522 intron pros + chr3R 11342586 intron pros + chr3R 11342649 intron pros + chr3R_4_11340001 chr3R_11340001 RAL-911 1457 chr3R 11379227 11379252 chr3R 11388402 11388427 roo 5 9172 3.0 3.0 3.0 1.2 9200 chr3R 11379227 intron pros + chr3R 11383827 intron pros + chr3R 11388427 intron pros + chr3R_5_11380001 chr3R_11380001 RAL-911 1458 chr3R 11481685 11481718 chr3R 11481802 11481830 4 105 2.5 5.0 3.8 0.8 145 chr3R 11481685 intergenic not near genes chr3R 11481758 intergenic not near genes chr3R 11481830 intergenic not near genes chr3R_4_11480001 chr3R_11480001 RAL-911 1459 chr3R 11664773 11664797 chr3R 11664885 11664908 6 110 2.0 1.0 1.5 2.4 135 chr3R 11664773 intron CG42327 + chr3R 11664840 intron CG42327 + chr3R 11664908 intron CG42327 + chr3R_6_11660001 chr3R_11660001 RAL-911 1460 chr3R 11694705 11694753 chr3R 11694818 11694846 23 106 2.0 7.0 4.5 4.2 141 chr3R 11694705 intergenic Fer3 - chr3R 11694776 intergenic Fer3 - chr3R 11694846 intergenic not near genes chr3R_23_11690001 chr3R_11690001 RAL-911 1461 chr3R 11853415 11853472 chr3R 11853584 11853639 10 159 0.5 1.5 1.0 5.0 224 chr3R 11853415 intron CG6959 - chr3R 11853527 intron CG6959 - chr3R 11853639 intron CG6959 - chr3R_10_11850001 chr3R_11850001 RAL-911 1462 chr3R 11853753 11853788 chr3R 11853875 11853913 10 124 4.5 4.0 4.2 1.9 160 chr3R 11853753 intron CG6959 - chr3R 11853833 intron CG6959 - chr3R 11853913 intron CG6959 - chr3R_10_11850001 chr3R_11850001 RAL-911 1463 chr3R 11957838 11957871 chr3R 11958141 11958174 S-element 6 301 5.0 1.0 3.0 1.5 336 chr3R 11957838 intergenic not near genes chr3R 11958006 intergenic not near genes chr3R 11958174 intergenic not near genes chr3R_6_11955001 chr3R_11955001 RAL-911 1464 chr3R 12022865 12022915 chr3R 12025062 12025111 pogo 9 2190 3.5 2.5 3.0 2.2 2246 chr3R 12022865 intergenic not near genes chr3R 12023988 intergenic not near genes chr3R 12025111 intergenic not near genes chr3R_9_12020001 chr3R_12020001 RAL-911 1465 chr3R 12462413 12462449 chr3R 12462529 12462564 8 112 2.0 3.5 2.8 2.1 151 chr3R 12462413 3` UTR CG12267 + chr3R 12462488 intergenic CG12267 +,CG5608 - chr3R 12462564 3` UTR CG5608 - chr3R_8_12460001 chr3R_12460001 RAL-911 1466 chr3R 12566785 12566801 chr3R 12566937 12566967 4 166 1.5 1.5 1.5 1.6 182 chr3R 12566785 intron Octbeta2R - chr3R 12566876 intron Octbeta2R - chr3R 12566967 intron Octbeta2R - chr3R_4_12565001 chr3R_12565001 RAL-911 1467 chr3R 12733467 12733489 chr3R 12733564 12733569 4 85 4.5 4.0 4.2 0.8 102 chr3R 12733467 intergenic not near genes chr3R 12733518 intergenic not near genes chr3R 12733569 intergenic not near genes chr3R_4_12730001 chr3R_12730001 RAL-911 1468 chr3R 12763114 12763153 chr3R 12763210 12763250 11 97 0.0 3.0 1.5 4.4 136 chr3R 12763114 intron beat-Vc - chr3R 12763182 intron beat-Vc - chr3R 12763250 intron beat-Vc - chr3R_11_12760001 chr3R_12760001 RAL-911 1469 chr3R 12786435 12786469 chr3R 12786815 12786820 6 374 2.5 3.0 2.8 1.6 385 chr3R 12786435 intergenic not near genes chr3R 12786628 intergenic not near genes chr3R 12786820 intergenic not near genes chr3R_6_12785001 chr3R_12785001 RAL-911 1470 chr3R 12814242 12814266 chr3R 12814319 12814361 7 88 2.5 5.0 3.8 1.5 119 chr3R 12814242 intron CG31345 - chr3R 12814302 intron CG31345 - chr3R 12814361 intron CG31345 - chr3R_7_12810001 chr3R_12810001 RAL-911 1471 chr3R 12851989 12852033 chr3R 12853454 12853498 14 1462 2.5 4.0 3.2 3.3 1509 chr3R 12851989 intergenic not near genes chr3R 12852744 intergenic not near genes chr3R 12853498 intergenic not near genes chr3R_14_12850001 chr3R_12850001 RAL-911 1472 chr3R 12864546 12864590 chr3R 12865051 12865095 roo 9 505 2.5 4.0 3.2 2.1 549 chr3R 12864546 intergenic not near genes chr3R 12864820 intergenic not near genes chr3R 12865095 intergenic not near genes chr3R_9_12860001 chr3R_12860001 RAL-911 1473 chr3R 12880875 12880917 chr3R 12881000 12881024 14 122 1.0 4.5 2.8 3.7 149 chr3R 12880875 intergenic not near genes chr3R 12880950 intergenic not near genes chr3R 12881024 intergenic not near genes chr3R_14_12880001 chr3R_12880001 RAL-911 1474 chr3R 12935339 12935351 chr3R 12935463 12935475 4 124 5.0 0.0 2.5 1.1 136 chr3R 12935339 intergenic not near genes chr3R 12935407 intergenic not near genes chr3R 12935475 intergenic not near genes chr3R_4_12935001 chr3R_12935001 RAL-911 1475 chr3R 13075356 13075389 chr3R 13075457 13075489 4 101 2.5 3.5 3.0 1.0 133 chr3R 13075356 intron sim + chr3R 13075422 intron sim + chr3R 13075489 intron sim + chr3R_4_13075001 chr3R_13075001 RAL-911 1476 chr3R 13197164 13197197 chr3R 13198464 13198497 5 1300 9.5 25.5 17.5 0.3 1333 chr3R 13197164 intergenic not near genes chr3R 13197830 intergenic not near genes chr3R 13198497 intergenic not near genes chr3R_5_13195001 chr3R_13195001 RAL-911 1477 chr3R 13197028 13197046 chr3R 13198478 13198521 9 1454 10.0 27.0 18.5 0.5 1493 chr3R 13197028 intergenic not near genes chr3R 13197774 intergenic not near genes chr3R 13198521 intergenic not near genes chr3R_9_13195001 chr3R_13195001 RAL-911 1478 chr3R 13201769 13201798 chr3R 13201886 13201915 9 115 0.0 7.5 3.8 1.9 146 chr3R 13201769 intergenic not near genes chr3R 13201842 intergenic not near genes chr3R 13201915 intergenic not near genes chr3R_9_13200001 chr3R_13200001 RAL-911 1479 chr3R 13274192 13274245 chr3R 13274291 13274343 13 97 4.0 3.0 3.5 2.9 151 chr3R 13274192 intergenic not near genes chr3R 13274268 intergenic not near genes chr3R 13274343 intergenic not near genes chr3R_13_13270001 chr3R_13270001 RAL-911 1480 chr3R 13314104 13314124 chr3R 13318912 13318931 Doc 5 4808 4.5 6.5 5.5 0.8 4827 chr3R 13314104 intergenic not near genes chr3R 13316518 intergenic not near genes chr3R 13318931 intergenic CG45080 - chr3R_5_13315001 chr3R_13315001 RAL-911 1481 chr3R 13349002 13349035 chr3R 13349079 13349131 9 89 2.0 1.5 1.8 3.2 129 chr3R 13349002 intergenic not near genes chr3R 13349066 intergenic not near genes chr3R 13349131 intergenic not near genes chr3R_9_13345001 chr3R_13345001 RAL-911 1482 chr3R 13376251 13376302 chr3R 13376360 13376391 7 101 0.0 0.5 0.2 5.8 140 chr3R 13376251 intron CG9813 - chr3R 13376321 intron CG9813 - chr3R 13376391 intron CG9813 - chr3R_7_13375001 chr3R_13375001 RAL-911 1483 chr3R 13380706 13380746 chr3R 13380814 13380853 4 102 3.0 4.0 3.5 0.9 147 chr3R 13380706 exon CG8870 + chr3R 13380780 exon CG8870 + chr3R 13380853 intron CG8870 + chr3R_4_13380001 chr3R_13380001 RAL-911 1484 chr3R 13418646 13418683 chr3R 13418742 13418779 8 94 3.5 3.5 3.5 1.8 133 chr3R 13418646 intergenic not near genes chr3R 13418712 intergenic not near genes chr3R 13418779 intergenic not near genes chr3R_8_13415001 chr3R_13415001 RAL-911 1485 chr3R 13517207 13517249 chr3R 13520043 13520086 jockey 8 2833 5.5 0.0 2.8 2.1 2879 chr3R 13517207 intergenic not near genes chr3R 13518646 intergenic not near genes chr3R 13520086 intergenic not near genes chr3R_8_13515001 chr3R_13515001 RAL-911 1486 chr3R 13599197 13599236 chr3R 13599328 13599362 4 130 1.0 3.5 2.2 1.2 165 chr3R 13599197 intergenic not near genes chr3R 13599280 intergenic not near genes chr3R 13599362 intergenic not near genes chr3R_4_13595001 chr3R_13595001 RAL-911 1487 chr3R 13659720 13659833 chr3R 13659846 13659937 5 111 0.0 0.0 0.0 5.0 217 chr3R 13659720 intron Hrb87F - chr3R 13659828 intron Hrb87F - chr3R 13659937 intron Hrb87F - chr3R_5_13655001 chr3R_13655001 RAL-911 1488 chr3R 13693028 13693029 chr3R 21907534 21907536 4 8214507 24.5 13.0 18.8 0.2 8214508 chr3R 13693028 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_4_17800001 chr3R_17800001 RAL-911 1489 chr3R 13758130 13758172 chr3R 13758236 13758278 6 106 0.0 4.5 2.2 1.9 148 chr3R 13758130 intron CG34383 + chr3R 13758204 intron CG34383 + chr3R 13758278 intron CG34383 + chr3R_6_13755001 chr3R_13755001 RAL-911 1490 chr3R 13782052 13782083 chr3R 13782153 13782172 4 98 0.5 3.5 2.0 1.3 120 chr3R 13782052 exon CG9286 + chr3R 13782112 intergenic CG9286 +,Dip-B + chr3R 13782172 intergenic CG9286 +,Dip-B + chr3R_4_13780001 chr3R_13780001 RAL-911 1491 chr3R 13908751 13908787 chr3R 13908866 13908902 9 113 3.0 5.0 4.0 1.8 151 chr3R 13908751 intergenic not near genes chr3R 13908826 intergenic not near genes chr3R 13908902 intergenic not near genes chr3R_9_13905001 chr3R_13905001 RAL-911 1492 chr3R 13948217 13948258 chr3R 13948315 13948356 6 98 2.0 1.0 1.5 2.4 139 chr3R 13948217 intergenic CG31517 + chr3R 13948286 intergenic CG31517 + chr3R 13948356 intergenic CG31517 + chr3R_6_13945001 chr3R_13945001 RAL-911 1493 chr3R 13954303 13954310 chr3R 13954421 13954428 5 117 2.0 0.0 1.0 2.5 125 chr3R 13954303 intergenic not near genes chr3R 13954366 intergenic not near genes chr3R 13954428 intergenic not near genes chr3R_5_13950001 chr3R_13950001 RAL-911 1494 chr3R 13975355 13975401 chr3R 13975454 13975501 12 98 5.0 1.0 3.0 3.0 146 chr3R 13975355 intron rdx - chr3R 13975428 intron rdx - chr3R 13975501 intron rdx - chr3R_12_13975001 chr3R_13975001 RAL-911 1495 chr3R 14021619 14021662 chr3R 14023464 14023507 S-element 16 1842 6.5 3.0 4.8 2.8 1888 chr3R 14021619 intron rdx - chr3R 14022563 intron rdx - chr3R 14023507 intron rdx - chr3R_16_14020001 chr3R_14020001 RAL-911 1496 chr3R 14029844 14029863 chr3R 14029951 14029971 12 108 1.5 5.0 3.2 2.9 127 chr3R 14029844 intron,intron rdx -,Cyp6d5 + chr3R 14029908 intron,intron rdx -,Cyp6d5 + chr3R 14029971 intron,intron rdx -,Cyp6d5 + chr3R_12_14025001 chr3R_14025001 RAL-911 1497 chr3R 14117421 14117468 chr3R 14117517 14117560 14 95 3.0 5.0 4.0 2.8 139 chr3R 14117421 intron Kif19A - chr3R 14117490 intron Kif19A - chr3R 14117560 intron Kif19A - chr3R_14_14115001 chr3R_14115001 RAL-911 1498 chr3R 14246385 14246418 chr3R 14247898 14247928 jockey 4 1514 3.5 5.5 4.5 0.7 1543 chr3R 14246385 intergenic not near genes chr3R 14247156 intergenic not near genes chr3R 14247928 intergenic not near genes chr3R_4_14245001 chr3R_14245001 RAL-911 1499 chr3R 14440712 14440745 chr3R 14440808 14440833 7 95 3.0 4.5 3.8 1.5 121 chr3R 14440712 intron cv-c - chr3R 14440772 intron cv-c - chr3R 14440833 intron cv-c - chr3R_7_14440001 chr3R_14440001 RAL-911 1500 chr3R 14458731 14458750 chr3R 14458828 14458847 4 94 1.0 7.0 4.0 0.8 116 chr3R 14458731 intron cv-c - chr3R 14458789 intron cv-c - chr3R 14458847 intron cv-c - chr3R_4_14455001 chr3R_14455001 RAL-911 1501 chr3R 14608448 14608461 chr3R 14608560 14608573 4 111 5.0 3.5 4.2 0.8 125 chr3R 14608448 intergenic stumps + chr3R 14608510 intergenic stumps + chr3R 14608573 intergenic stumps + chr3R_4_14605001 chr3R_14605001 RAL-911 1502 chr3R 14848003 14848048 chr3R 14848108 14848159 14 109 3.0 3.0 3.0 3.5 156 chr3R 14848003 intron btsz - chr3R 14848081 intron btsz - chr3R 14848159 intron btsz - chr3R_14_14845001 chr3R_14845001 RAL-911 1503 chr3R 15041408 15041429 chr3R 15045196 15045209 Doc 7 3786 0.0 5.0 2.5 2.0 3801 chr3R 15041408 intergenic not near genes chr3R 15043308 intergenic not near genes chr3R 15045209 intergenic not near genes chr3R_7_15040001 chr3R_15040001 RAL-911 1504 chr3R 15059260 15059481 chr3R 15059474 15059588 BS 14 160 0.0 0.0 0.0 14.0 328 chr3R 15059260 intron dpr9 - chr3R 15059424 intron dpr9 - chr3R 15059588 intron dpr9 - chr3R_14_15055001 chr3R_15055001 RAL-911 1505 chr3R 15061020 15061034 chr3R 15061121 15061135 5 101 1.0 3.0 2.0 1.7 115 chr3R 15061020 intron dpr9 - chr3R 15061078 intron dpr9 - chr3R 15061135 intron dpr9 - chr3R_5_15060001 chr3R_15060001 RAL-911 1506 chr3R 15079793 15079799 chr3R 15080054 15080059 pogo 5 261 10.5 5.0 7.8 0.6 266 chr3R 15079793 3` UTR CG6966 - chr3R 15079926 3` UTR CG6966 - chr3R 15080059 3` UTR CG6966 - chr3R_5_15075001 chr3R_15075001 RAL-911 1507 chr3R 15079804 15079838 chr3R 15080049 15080099 pogo 8 257 2.0 4.0 3.0 2.0 295 chr3R 15079804 3` UTR CG6966 - chr3R 15079952 3` UTR CG6966 - chr3R 15080099 3` UTR CG6966 - chr3R_8_15075001 chr3R_15075001 RAL-911 1508 chr3R 15102477 15102526 chr3R 15109752 15109797 412 16 7275 8.0 5.5 6.8 2.1 7320 chr3R 15102477 intron CG42788 - chr3R 15106137 intron CG42788 - chr3R 15109797 intron CG42788 - chr3R_16_15105001 chr3R_15105001 RAL-911 1509 chr3R 15114902 15114927 chr3R 15114998 15115019 4 91 1.5 1.0 1.2 1.8 117 chr3R 15114902 intron CG42788 - chr3R 15114960 intron CG42788 - chr3R 15115019 intron CG42788 - chr3R_4_15110001 chr3R_15110001 RAL-911 1510 chr3R 15127763 15127811 chr3R 15127862 15127911 23 99 2.0 1.5 1.8 8.2 148 chr3R 15127763 intron CG42788 - chr3R 15127837 intron CG42788 - chr3R 15127911 intron CG42788 - chr3R_23_15125001 chr3R_15125001 RAL-911 1511 chr3R 15132041 15132073 chr3R 15135121 15135153 Juan 6 3080 3.5 4.5 4.0 1.2 3112 chr3R 15132041 intergenic CG42788 - chr3R 15133597 intergenic not near genes chr3R 15135153 3` UTR CG6912 - chr3R_6_15130001 chr3R_15130001 RAL-911 1512 chr3R 15265385 15265430 chr3R 15265490 15265535 10 105 3.0 2.0 2.5 2.9 150 chr3R 15265385 intergenic Set +,Oscp + chr3R 15265460 intergenic Oscp +,Set + chr3R 15265535 intergenic Oscp +,Set + chr3R_10_15265001 chr3R_15265001 RAL-911 1513 chr3R 15302223 15302252 chr3R 15302314 15302322 4 80 8.5 1.5 5.0 0.7 99 chr3R 15302223 intron Tm1 + chr3R 15302272 intron Tm1 + chr3R 15302322 intron Tm1 + chr3R_4_15300001 chr3R_15300001 RAL-911 1514 chr3R 15406125 15406169 chr3R 15406226 15406270 9 100 4.5 1.0 2.8 2.4 145 chr3R 15406125 intron CG6125 - chr3R 15406198 intron CG6125 - chr3R 15406270 intron CG6125 - chr3R_9_15405001 chr3R_15405001 RAL-911 1515 chr3R 15445891 15445905 chr3R 15445996 15446010 4 105 4.0 0.0 2.0 1.3 119 chr3R 15445891 exon AdamTS-A - chr3R 15445950 intron AdamTS-A - chr3R 15446010 intron AdamTS-A - chr3R_4_15445001 chr3R_15445001 RAL-911 1516 chr3R 15570137 15570152 chr3R 15570241 15570252 4 98 5.5 2.0 3.8 0.8 115 chr3R 15570137 intergenic not near genes chr3R 15570194 intergenic not near genes chr3R 15570252 intergenic not near genes chr3R_4_15570001 chr3R_15570001 RAL-911 1517 chr3R 15601151 15601195 chr3R 15608693 15608736 412 11 7537 5.0 2.5 3.8 2.3 7585 chr3R 15601151 intergenic not near genes chr3R 15604944 intergenic not near genes chr3R 15608736 intergenic not near genes chr3R_11_15600001 chr3R_15600001 RAL-911 1518 chr3R 15646776 15646797 chr3R 15646879 15646900 7 102 3.5 2.0 2.8 1.8 124 chr3R 15646776 intergenic not near genes chr3R 15646838 intergenic not near genes chr3R 15646900 intergenic not near genes chr3R_7_15645001 chr3R_15645001 RAL-911 1519 chr3R 15667990 15668027 chr3R 15668099 15668109 7 105 10.5 6.0 8.2 0.8 119 chr3R 15667990 intron,5` UTR pxb +,CR43849 + chr3R 15668050 intron,5` UTR pxb +,CR43849 + chr3R 15668109 intron,5` UTR pxb +,CR43849 + chr3R_7_15665001 chr3R_15665001 RAL-911 1520 chr3R 15691174 15691316 chr3R 15691299 15691423 7 106 0.0 0.0 0.0 7.0 249 chr3R 15691174 intergenic not near genes chr3R 15691298 intergenic not near genes chr3R 15691423 intergenic not near genes chr3R_7_15690001 chr3R_15690001 RAL-911 1521 chr3R 15702867 15702893 chr3R 15703077 15703103 6 208 4.5 4.0 4.2 1.2 236 chr3R 15702867 intergenic not near genes chr3R 15702985 intergenic not near genes chr3R 15703103 intergenic not near genes chr3R_6_15700001 chr3R_15700001 RAL-911 1522 chr3R 15892637 15892681 chr3R 15892738 15892782 6 101 8.5 9.5 9.0 0.6 145 chr3R 15892637 intron CG14877 - chr3R 15892710 intron CG14877 - chr3R 15892782 intron CG14877 - chr3R_6_15890001 chr3R_15890001 RAL-911 1523 chr3R 15952875 15952923 chr3R 15952976 15953006 16 97 8.5 9.5 9.0 1.6 131 chr3R 15952875 intron Sap47 + chr3R 15952940 intron Sap47 + chr3R 15953006 intron Sap47 + chr3R_16_15950001 chr3R_15950001 RAL-911 1524 chr3R 16033399 16033430 chr3R 16033500 16033531 8 101 3.0 2.0 2.5 2.3 132 chr3R 16033399 intron pnr + chr3R 16033465 intron pnr + chr3R 16033531 intron pnr + chr3R_8_16030001 chr3R_16030001 RAL-911 1525 chr3R 16189409 16189440 chr3R 16189826 16189856 invader4 8 421 5.5 11.0 8.2 0.9 447 chr3R 16189409 intron sra + chr3R 16189632 intron sra + chr3R 16189856 intron sra + chr3R_8_16185001 chr3R_16185001 RAL-911 1526 chr3R 16194397 16194425 chr3R 16194680 16194708 4 279 16.0 16.5 16.2 0.2 311 chr3R 16194397 intron sra + chr3R 16194552 intron sra + chr3R 16194708 intron sra + chr3R_4_16190001 chr3R_16190001 RAL-911 1527 chr3R 16620377 16620401 chr3R 16620529 16620553 6 155 14.5 11.5 13.0 0.4 176 chr3R 16620377 intergenic CG14893 +,CG17560 + chr3R 16620465 intergenic CG14893 + chr3R 16620553 intergenic CG14893 + chr3R_6_16620001 chr3R_16620001 RAL-911 1528 chr3R 16826916 16826931 chr3R 16827026 16827033 4 108 11.0 10.5 10.8 0.3 117 chr3R 16826916 intron abd-A - chr3R 16826974 intron abd-A - chr3R 16827033 intron abd-A - chr3R_4_16825001 chr3R_16825001 RAL-911 1529 chr3R 16860330 16860370 chr3R 16860421 16860464 6 94 0.0 0.0 0.0 6.0 134 chr3R 16860330 intron iab-8 - chr3R 16860397 intron iab-8 - chr3R 16860464 intron iab-8 - chr3R_6_16860001 chr3R_16860001 RAL-911 1530 chr3R 17121506 17121551 chr3R 17121721 17121766 12 212 5.5 1.5 3.5 2.7 260 chr3R 17121506 intron cher - chr3R 17121636 intron,exon cher -,CG42779 + chr3R 17121766 intron,exon cher -,CG42779 + chr3R_12_17120001 chr3R_17120001 RAL-911 1531 chr3R 17294645 17294670 chr3R 17295093 17295108 BS 6 446 4.0 0.0 2.0 2.0 463 chr3R 17294645 intergenic not near genes chr3R 17294876 intergenic not near genes chr3R 17295108 intergenic not near genes chr3R_6_17290001 chr3R_17290001 RAL-911 1532 chr3R 17346676 17346712 chr3R 17348259 17348294 F-element 9 1583 4.0 3.0 3.5 2.0 1618 chr3R 17346676 intron beat-IIa - chr3R 17347485 intron beat-IIa - chr3R 17348294 intron beat-IIa - chr3R_9_17345001 chr3R_17345001 RAL-911 1533 chr3R 17452644 17452666 chr3R 17452740 17452762 5 96 0.0 1.5 0.8 2.8 118 chr3R 17452644 intergenic not near genes chr3R 17452703 intergenic not near genes chr3R 17452762 intergenic not near genes chr3R_5_17450001 chr3R_17450001 RAL-911 1534 chr3R 17461183 17461207 chr3R 17461285 17461309 8 97 6.0 3.5 4.8 1.4 126 chr3R 17461183 intergenic not near genes chr3R 17461246 intergenic not near genes chr3R 17461309 intergenic not near genes chr3R_8_17460001 chr3R_17460001 RAL-911 1535 chr3R 17497941 17497988 chr3R 17498047 17498094 12 106 1.5 1.5 1.5 4.8 153 chr3R 17497941 intron Dscam3 - chr3R 17498018 intron Dscam3 - chr3R 17498094 intron Dscam3 - chr3R_12_17495001 chr3R_17495001 RAL-911 1536 chr3R 17498849 17498873 chr3R 17499011 17499035 5 162 5.0 3.5 4.2 1.0 186 chr3R 17498849 intron Dscam3 - chr3R 17498942 intron Dscam3 - chr3R 17499035 intron Dscam3 - chr3R_5_17495001 chr3R_17495001 RAL-911 1537 chr3R 17591281 17591312 chr3R 17591724 17591768 F-element 4 453 3.5 3.5 3.5 0.9 487 chr3R 17591281 intergenic not near genes chr3R 17591524 intergenic not near genes chr3R 17591768 intergenic not near genes chr3R_4_17590001 chr3R_17590001 RAL-911 1538 chr3R 17638307 17638345 chr3R 17638811 17638851 roo 21 505 5.0 7.0 6.0 3.0 544 chr3R 17638307 intron CG43175 + chr3R 17638579 intron CG43175 + chr3R 17638851 intron,intron CG43175 +,CR45222 + chr3R_21_17635001 chr3R_17635001 RAL-911 1539 chr3R 17653064 17653112 chr3R 17653171 17653191 5 93 3.0 4.0 3.5 1.1 127 chr3R 17653064 intron,intron CG14322 +,CR45223 - chr3R 17653128 intron,intron CG14322 +,CR45223 - chr3R 17653191 intron,intron CG14322 +,CR45223 - chr3R_5_17650001 chr3R_17650001 RAL-911 1540 chr3R 17657651 17657661 chr3R 17657820 17657829 INE-1 4 170 0.0 9.0 4.5 0.7 178 chr3R 17657651 intron CG14322 + chr3R 17657740 intron CG14322 + chr3R 17657829 intron CG14322 + chr3R_4_17655001 chr3R_17655001 RAL-911 1541 chr3R 17702680 17702729 chr3R 17702782 17702822 10 100 2.0 2.5 2.2 3.1 142 chr3R 17702680 intron osa - chr3R 17702751 intron osa - chr3R 17702822 intron osa - chr3R_10_17700001 chr3R_17700001 RAL-911 1542 chr3R 17734826 17734847 chr3R 17734960 17734981 9 134 6.5 1.0 3.8 1.9 155 chr3R 17734826 intergenic CG14321 + chr3R 17734904 intergenic not near genes chr3R 17734981 intergenic not near genes chr3R_9_17730001 chr3R_17730001 RAL-911 1543 chr3R 17823190 17823221 chr3R 17823295 17823326 9 103 2.5 2.5 2.5 2.6 136 chr3R 17823190 intron tinc + chr3R 17823258 intron tinc + chr3R 17823326 intron tinc + chr3R_9_17820001 chr3R_17820001 RAL-911 1544 chr3R 17895325 17895373 chr3R 17895434 17895484 9 111 2.0 2.5 2.2 2.8 159 chr3R 17895325 intron Rim - chr3R 17895404 intron Rim - chr3R 17895484 intron Rim - chr3R_9_17895001 chr3R_17895001 RAL-911 1545 chr3R 17899071 17899084 chr3R 17899169 17899182 7 97 8.0 4.0 6.0 1.0 111 chr3R 17899071 intron Rim - chr3R 17899126 intron Rim - chr3R 17899182 intron Rim - chr3R_7_17895001 chr3R_17895001 RAL-911 1546 chr3R 17983203 17983235 chr3R 17983299 17983331 4 93 3.5 0.0 1.8 1.4 128 chr3R 17983203 intron cpo + chr3R 17983267 intron cpo + chr3R 17983331 intron cpo + chr3R_4_17980001 chr3R_17980001 RAL-911 1547 chr3R 18041755 18041772 chr3R 18041839 18041839 4 85 0.0 0.5 0.2 3.3 84 chr3R 18041755 intergenic not near genes chr3R 18041797 intergenic not near genes chr3R 18041839 intergenic not near genes chr3R_4_18040001 chr3R_18040001 RAL-911 1548 chr3R 18061575 18061608 chr3R 18063159 18063196 F-element 19 1585 2.5 5.0 3.8 4.0 1621 chr3R 18061575 intergenic not near genes chr3R 18062386 intergenic not near genes chr3R 18063196 intergenic not near genes chr3R_19_18060001 chr3R_18060001 RAL-911 1549 chr3R 18122874 18122911 chr3R 18122971 18123008 9 95 4.0 1.0 2.5 2.6 134 chr3R 18122874 intron sr + chr3R 18122941 intron sr + chr3R 18123008 intron sr + chr3R_9_18120001 chr3R_18120001 RAL-911 1550 chr3R 18136215 18136248 chr3R 18136349 18136382 8 134 1.5 4.5 3.0 2.0 167 chr3R 18136215 intergenic not near genes chr3R 18136298 intergenic not near genes chr3R 18136382 intergenic not near genes chr3R_8_18135001 chr3R_18135001 RAL-911 1551 chr3R 18331764 18331769 chr3R 18333278 18333283 hopper2 6 1514 7.0 5.0 6.0 0.9 1519 chr3R 18331764 3` UTR CG15803 - chr3R 18332524 intron CG15803 - chr3R 18333283 3` UTR CG15803 - chr3R_6_18330001 chr3R_18330001 RAL-911 1552 chr3R 18379623 18379647 chr3R 18379942 18379973 8 323 2.0 5.5 3.8 1.7 350 chr3R 18379623 intron CG7675 - chr3R 18379798 intron CG7675 - chr3R 18379973 intron CG7675 - chr3R_8_18375001 chr3R_18375001 RAL-911 1553 chr3R 18394452 18394495 chr3R 18394549 18394581 10 93 6.5 3.0 4.8 1.7 129 chr3R 18394452 intron Vha100-2 - chr3R 18394516 intron Vha100-2 - chr3R 18394581 intron Vha100-2 - chr3R_10_18390001 chr3R_18390001 RAL-911 1554 chr3R 18472270 18472286 chr3R 18472391 18472407 5 121 5.0 3.0 4.0 1.0 137 chr3R 18472270 intron fru - chr3R 18472338 intron fru - chr3R 18472407 intron fru - chr3R_5_18470001 chr3R_18470001 RAL-911 1555 chr3R 18473231 18473247 chr3R 18473338 18473354 8 107 0.0 0.0 0.0 8.0 123 chr3R 18473231 intron fru - chr3R 18473292 intron fru - chr3R 18473354 intron fru - chr3R_8_18470001 chr3R_18470001 RAL-911 1556 chr3R 18485350 18485355 chr3R 18485470 18485475 4 120 0.0 6.5 3.2 1.0 125 chr3R 18485350 intron fru - chr3R 18485412 intron fru - chr3R 18485475 intron fru - chr3R_4_18485001 chr3R_18485001 RAL-911 1557 chr3R 18501597 18501623 chr3R 18501698 18501724 9 100 3.0 3.5 3.2 2.1 127 chr3R 18501597 intron fru - chr3R 18501660 intron fru - chr3R 18501724 intron fru - chr3R_9_18500001 chr3R_18500001 RAL-911 1558 chr3R 18549723 18549761 chr3R 18549870 18549908 14 147 3.0 2.5 2.8 3.7 185 chr3R 18549723 intergenic not near genes chr3R 18549816 intergenic not near genes chr3R 18549908 intergenic not near genes chr3R_14_18545001 chr3R_18545001 RAL-911 1559 chr3R 18562606 18562614 chr3R 18562739 18562747 4 133 0.0 0.0 0.0 4.0 141 chr3R 18562606 intergenic not near genes chr3R 18562676 intergenic not near genes chr3R 18562747 intergenic not near genes chr3R_4_18560001 chr3R_18560001 RAL-911 1560 chr3R 18606504 18606518 chr3R 18610755 18610770 F-element 7 4251 5.5 10.5 8.0 0.8 4266 chr3R 18606504 intron,intron qin +,CG14304 - chr3R 18608637 intron,intron qin +,CG14304 - chr3R 18610770 intron,intron qin +,CG14304 - chr3R_7_18605001 chr3R_18605001 RAL-911 1561 chr3R 18606520 18606527 chr3R 18610742 18610779 F-element 4 4244 2.5 7.5 5.0 0.7 4259 chr3R 18606520 intron,intron qin +,CG14304 - chr3R 18608650 intron,intron qin +,CG14304 - chr3R 18610779 intron,intron qin +,CG14304 - chr3R_4_18605001 chr3R_18605001 RAL-911 1562 chr3R 18617692 18617734 chr3R 18617792 18617834 22 99 4.5 5.5 5.0 3.7 142 chr3R 18617692 intron,intron qin +,CG14304 - chr3R 18617763 intron,intron qin +,CG14304 - chr3R 18617834 intron,intron qin +,CG14304 - chr3R_22_18615001 chr3R_18615001 RAL-911 1563 chr3R 18619586 18619633 chr3R 18620157 18620207 8 573 3.5 1.5 2.5 2.3 621 chr3R 18619586 intron,intron qin +,CG14304 - chr3R 18619896 intron,intron qin +,CG14304 - chr3R 18620207 intron,intron qin +,CG14304 - chr3R_8_18615001 chr3R_18615001 RAL-911 1564 chr3R 18626842 18626873 chr3R 18627011 18627041 4 168 0.0 0.0 0.0 4.0 199 chr3R 18626842 intron qin + chr3R 18626942 intron qin + chr3R 18627041 intron qin + chr3R_4_18625001 chr3R_18625001 RAL-911 1565 chr3R 18628856 18629028 chr3R 18629000 18629138 13 124 0.5 0.0 0.2 10.8 282 chr3R 18628856 intron qin + chr3R 18628997 intron qin + chr3R 18629138 intron qin + chr3R_13_18625001 chr3R_18625001 RAL-911 1566 chr3R 18721053 18721063 chr3R 18721210 18721220 5 157 3.0 2.0 2.5 1.4 167 chr3R 18721053 intron Cha + chr3R 18721136 intron Cha + chr3R 18721220 intron Cha + chr3R_5_18720001 chr3R_18720001 RAL-911 1567 chr3R 18766762 18766808 chr3R 18766854 18766882 14 93 3.5 1.0 2.2 4.4 120 chr3R 18766762 intron CG7720 - chr3R 18766822 intron CG7720 - chr3R 18766882 intron CG7720 - chr3R_14_18765001 chr3R_18765001 RAL-911 1568 chr3R 18792821 18792836 chr3R 18792902 18792936 6 98 2.0 0.0 1.0 3.0 115 chr3R 18792821 intron CG7720 - chr3R 18792878 intron CG7720 - chr3R 18792936 intron CG7720 - chr3R_6_18790001 chr3R_18790001 RAL-911 1569 chr3R 18812074 18812092 chr3R 18812167 18812190 8 96 6.5 3.5 5.0 1.3 116 chr3R 18812074 intron CG18208 - chr3R 18812132 intron CG18208 - chr3R 18812190 intron CG18208 - chr3R_8_18810001 chr3R_18810001 RAL-911 1570 chr3R 18817489 18817526 chr3R 18817607 18817644 12 116 0.0 0.0 0.0 12.0 155 chr3R 18817489 intron CG18208 - chr3R 18817566 intron CG18208 - chr3R 18817644 intron CG18208 - chr3R_12_18815001 chr3R_18815001 RAL-911 1571 chr3R 18862576 18862596 chr3R 18862681 18862701 5 105 0.0 2.0 1.0 2.5 125 chr3R 18862576 intergenic not near genes chr3R 18862638 intergenic not near genes chr3R 18862701 intergenic not near genes chr3R_5_18860001 chr3R_18860001 RAL-911 1572 chr3R 18887582 18887594 chr3R 18887683 18887694 6 99 3.5 3.0 3.2 1.4 112 chr3R 18887582 intergenic not near genes chr3R 18887638 intergenic not near genes chr3R 18887694 intergenic not near genes chr3R_6_18885001 chr3R_18885001 RAL-911 1573 chr3R 18888836 18888863 chr3R 18889166 18889218 6 342 2.0 3.5 2.8 1.6 382 chr3R 18888836 intergenic not near genes chr3R 18889027 intergenic not near genes chr3R 18889218 intergenic not near genes chr3R_6_18885001 chr3R_18885001 RAL-911 1574 chr3R 19136424 19136440 chr3R 19139799 19139806 Bari1 4 3368 24.5 28.0 26.2 0.1 3382 chr3R 19136424 exon Cyp12a4 + chr3R 19138115 intergenic not near genes chr3R 19139806 3` UTR Ppcs - chr3R_4_19135001 chr3R_19135001 RAL-911 1575 chr3R 19276920 19276947 chr3R 19277013 19277040 5 96 3.0 0.5 1.8 1.8 120 chr3R 19276920 intergenic not near genes chr3R 19276980 intergenic not near genes chr3R 19277040 intergenic not near genes chr3R_5_19275001 chr3R_19275001 RAL-911 1576 chr3R 19340379 19340430 chr3R 19340476 19340527 19 96 5.0 4.5 4.8 3.3 148 chr3R 19340379 intergenic not near genes chr3R 19340453 intergenic not near genes chr3R 19340527 intergenic not near genes chr3R_19_19340001 chr3R_19340001 RAL-911 1577 chr3R 19344652 19344700 chr3R 19344807 19344855 5 146 0.5 2.0 1.2 2.3 203 chr3R 19344652 intergenic not near genes chr3R 19344754 intergenic not near genes chr3R 19344855 intergenic not near genes chr3R_5_19340001 chr3R_19340001 RAL-911 1578 chr3R 19417794 19417845 chr3R 19417948 19417956 5 134 1.5 0.0 0.8 2.8 162 chr3R 19417794 intron CG31221 + chr3R 19417875 intron CG31221 + chr3R 19417956 intron CG31221 + chr3R_5_19415001 chr3R_19415001 RAL-911 1579 chr3R 19505946 19505961 chr3R 19506031 19506080 4 108 1.0 3.0 2.0 1.3 134 chr3R 19505946 intron Dys + chr3R 19506013 intron Dys + chr3R 19506080 intron Dys + chr3R_4_19505001 chr3R_19505001 RAL-911 1580 chr3R 19555177 19555220 chr3R 19555399 19555442 5 222 2.5 1.5 2.0 1.7 265 chr3R 19555177 intron Dys + chr3R 19555310 intron Dys + chr3R 19555442 intron Dys + chr3R_5_19555001 chr3R_19555001 RAL-911 1581 chr3R 19602561 19602601 chr3R 19602661 19602698 15 100 1.5 4.0 2.8 3.9 137 chr3R 19602561 exon CG7333 + chr3R 19602630 intergenic CG7333 + chr3R 19602698 intergenic CG7333 + chr3R_15_19600001 chr3R_19600001 RAL-911 1582 chr3R 19633284 19633321 chr3R 19633380 19633427 8 97 0.0 3.5 1.8 2.9 143 chr3R 19633284 intergenic subdued - chr3R 19633356 intergenic subdued - chr3R 19633427 3` UTR subdued - chr3R_8_19630001 chr3R_19630001 RAL-911 1583 chr3R 19716217 19716230 chr3R 19716307 19716327 4 95 2.5 0.0 1.2 1.8 110 chr3R 19716217 intergenic CG34286 - chr3R 19716272 intergenic CG34286 - chr3R 19716327 intergenic CG34286 - chr3R_4_19715001 chr3R_19715001 RAL-911 1584 chr3R 19750033 19750071 chr3R 19750132 19750171 8 92 2.5 4.0 3.2 1.9 138 chr3R 19750033 intron GluClalpha + chr3R 19750102 intron GluClalpha + chr3R 19750171 intron GluClalpha + chr3R_8_19750001 chr3R_19750001 RAL-911 1585 chr3R 19774262 19774271 chr3R 19778203 19778212 4 3941 5.0 8.5 6.8 0.5 3950 chr3R 19774262 intron GluClalpha + chr3R 19776237 exon CG11659 - chr3R 19778212 intergenic not near genes chr3R_4_19775001 chr3R_19775001 RAL-911 1586 chr3R 19907634 19907666 chr3R 19908745 19908770 8 1106 11.5 8.5 10.0 0.7 1136 chr3R 19907634 intron RhoGAP92B + chr3R 19908202 intron RhoGAP92B + chr3R 19908770 intron,intron RhoGAP92B +,CR45048 - chr3R_8_19905001 chr3R_19905001 RAL-911 1587 chr3R 19908281 19908305 chr3R 19908385 19908409 7 104 0.0 3.0 1.5 2.8 128 chr3R 19908281 intron RhoGAP92B + chr3R 19908345 intron RhoGAP92B + chr3R 19908409 intron,3` UTR RhoGAP92B +,CR45048 - chr3R_7_19905001 chr3R_19905001 RAL-911 1588 chr3R 19913993 19914042 chr3R 19914106 19914155 15 109 3.5 5.0 4.2 2.9 162 chr3R 19913993 3` UTR RhoGAP92B + chr3R 19914074 3` UTR RhoGAP92B + chr3R 19914155 3` UTR RhoGAP92B + chr3R_15_19910001 chr3R_19910001 RAL-911 1589 chr3R 19955335 19955380 chr3R 19955456 19955501 5 121 3.0 2.0 2.5 1.4 166 chr3R 19955335 intron Hs6st - chr3R 19955418 intron Hs6st - chr3R 19955501 intron Hs6st - chr3R_5_19955001 chr3R_19955001 RAL-911 1590 chr3R 20097691 20097713 chr3R 20097789 20097811 11 98 6.5 4.5 5.5 1.7 120 chr3R 20097691 intergenic not near genes chr3R 20097751 intergenic not near genes chr3R 20097811 intergenic not near genes chr3R_11_20095001 chr3R_20095001 RAL-911 1591 chr3R 20109517 20109568 chr3R 20114743 20114793 copia 12 5224 1.0 3.0 2.0 4.0 5276 chr3R 20109517 intergenic not near genes chr3R 20112155 intergenic not near genes chr3R 20114793 intergenic CG10887 + chr3R_12_20110001 chr3R_20110001 RAL-911 1592 chr3R 20222244 20222274 chr3R 20222347 20222347 4 95 2.0 2.5 2.2 1.2 103 chr3R 20222244 intron Nlg4 + chr3R 20222296 intron Nlg4 + chr3R 20222347 intron Nlg4 + chr3R_4_20220001 chr3R_20220001 RAL-911 1593 chr3R 20256860 20256871 chr3R 20256957 20256969 4 98 0.5 13.0 6.8 0.5 109 chr3R 20256860 intron cic + chr3R 20256914 intron cic + chr3R 20256969 intron cic + chr3R_4_20255001 chr3R_20255001 RAL-911 1594 chr3R 20266497 20266548 chr3R 20272986 20273019 Burdock 13 6488 1.0 5.0 3.0 3.2 6522 chr3R 20266497 intron cic + chr3R 20269758 intron cic + chr3R 20273019 intron cic + chr3R_13_20265001 chr3R_20265001 RAL-911 1595 chr3R 20282261 20282307 chr3R 20282357 20282403 9 95 0.5 3.5 2.0 3.0 142 chr3R 20282261 intron cic + chr3R 20282332 intron cic + chr3R 20282403 intron cic + chr3R_9_20280001 chr3R_20280001 RAL-911 1596 chr3R 20308167 20308217 chr3R 20308275 20308336 11 106 1.5 0.0 0.8 6.1 169 chr3R 20308167 intergenic not near genes chr3R 20308252 intergenic not near genes chr3R 20308336 intergenic not near genes chr3R_11_20305001 chr3R_20305001 RAL-911 1597 chr3R 20330978 20331029 chr3R 20331484 20331535 roo 22 505 4.0 5.5 4.8 3.8 557 chr3R 20330978 intergenic Sirt2 + chr3R 20331256 intergenic Sirt2 + chr3R 20331535 intergenic not near genes chr3R_22_20330001 chr3R_20330001 RAL-911 1598 chr3R 20394810 20394820 chr3R 20394906 20394911 4 94 0.0 4.5 2.2 1.2 101 chr3R 20394810 intron Gfrl - chr3R 20394860 intron Gfrl - chr3R 20394911 intron Gfrl - chr3R_4_20390001 chr3R_20390001 RAL-911 1599 chr3R 20512971 20513032 chr3R 20515705 20515755 opus 12 2726 0.0 3.5 1.8 4.3 2784 chr3R 20512971 intergenic not near genes chr3R 20514363 intergenic not near genes chr3R 20515755 intergenic not near genes chr3R_12_20510001 chr3R_20510001 RAL-911 1600 chr3R 20545988 20546004 chr3R 20546071 20546077 4 86 0.5 5.5 3.0 1.0 89 chr3R 20545988 intron Stat92E - chr3R 20546032 intron Stat92E - chr3R 20546077 intron Stat92E - chr3R_4_20545001 chr3R_20545001 RAL-911 1601 chr3R 20703463 20703496 chr3R 20703877 20703903 9 412 6.0 2.0 4.0 1.8 440 chr3R 20703463 intron Oamb - chr3R 20703683 intron Oamb - chr3R 20703903 intron Oamb - chr3R_9_20700001 chr3R_20700001 RAL-911 1602 chr3R 20730915 20731061 chr3R 20731028 20731169 8 105 0.5 0.5 0.5 5.3 254 chr3R 20730915 intergenic not near genes chr3R 20731042 intergenic not near genes chr3R 20731169 intergenic CG31205 + chr3R_8_20730001 chr3R_20730001 RAL-911 1603 chr3R 20771710 20771731 chr3R 20771793 20771800 6 91 0.0 4.0 2.0 2.0 90 chr3R 20771710 intron,intron Syp +,Takl1 - chr3R 20771755 intron,intron Syp +,Takl1 - chr3R 20771800 intron,exon Syp +,Takl1 - chr3R_6_20770001 chr3R_20770001 RAL-911 1604 chr3R 20876164 20876204 chr3R 20876365 20876381 8 197 2.5 0.0 1.2 3.6 217 chr3R 20876164 intergenic not near genes chr3R 20876272 intergenic not near genes chr3R 20876381 intergenic not near genes chr3R_8_20875001 chr3R_20875001 RAL-911 1605 chr3R 20899901 20899940 chr3R 20900017 20900056 6 116 3.5 5.5 4.5 1.1 155 chr3R 20899901 intergenic not near genes chr3R 20899978 intergenic not near genes chr3R 20900056 intergenic not near genes chr3R_6_20895001 chr3R_20895001 RAL-911 1606 chr3R 20938904 20938940 chr3R 20938997 20939017 4 84 0.5 1.0 0.8 2.2 113 chr3R 20938904 intron CG31191 - chr3R 20938960 intron CG31191 - chr3R 20939017 intron CG31191 - chr3R_4_20935001 chr3R_20935001 RAL-911 1607 chr3R 21014006 21014035 chr3R 21014088 21014123 8 87 7.5 5.0 6.2 1.1 117 chr3R 21014006 3` UTR Calx + chr3R 21014064 3` UTR Calx + chr3R 21014123 3` UTR Calx + chr3R_8_21010001 chr3R_21010001 RAL-911 1608 chr3R 21108031 21108058 chr3R 21108312 21108339 10 281 1.5 5.0 3.2 2.4 308 chr3R 21108031 intergenic Sec15 -,rtet + chr3R 21108185 intergenic Sec15 -,rtet + chr3R 21108339 intergenic rtet +,Sec15 - chr3R_10_21105001 chr3R_21105001 RAL-911 1609 chr3R 21132616 21132645 chr3R 21132719 21132747 5 98 3.0 0.0 1.5 2.0 131 chr3R 21132616 3` UTR Ice2 + chr3R 21132682 3` UTR Ice2 + chr3R 21132747 3` UTR CG7009 - chr3R_5_21130001 chr3R_21130001 RAL-911 1610 chr3R 21240440 21240475 chr3R 21240552 21240587 10 110 3.0 5.5 4.2 1.9 147 chr3R 21240440 intergenic not near genes chr3R 21240514 intergenic not near genes chr3R 21240587 intergenic not near genes chr3R_10_21240001 chr3R_21240001 RAL-911 1611 chr3R 21383267 21383272 chr3R 21383367 21383372 4 100 1.0 0.5 0.8 2.2 105 chr3R 21383267 intergenic not near genes chr3R 21383320 intergenic not near genes chr3R 21383372 intergenic not near genes chr3R_4_21380001 chr3R_21380001 RAL-911 1612 chr3R 21385694 21385953 chr3R 21385785 21386017 9 84 1.0 0.0 0.5 6.0 323 chr3R 21385694 intergenic not near genes chr3R 21385856 intergenic not near genes chr3R 21386017 intergenic not near genes chr3R_9_21385001 chr3R_21385001 RAL-911 1613 chr3R 21408823 21408879 chr3R 21408922 21408949 7 87 0.5 3.5 2.0 2.3 126 chr3R 21408823 intergenic CheB93b +,CheB93a + chr3R 21408886 intergenic CheB93b + chr3R 21408949 intergenic CheB93b + chr3R_7_21405001 chr3R_21405001 RAL-911 1614 chr3R 21472023 21472035 chr3R 21472104 21472136 4 94 1.0 5.5 3.2 1.0 113 chr3R 21472023 intergenic not near genes chr3R 21472080 intergenic not near genes chr3R 21472136 intergenic not near genes chr3R_4_21470001 chr3R_21470001 RAL-911 1615 chr3R 21506854 21506876 chr3R 21506960 21506982 8 103 3.0 4.0 3.5 1.8 128 chr3R 21506854 intron C15 + chr3R 21506918 intron C15 + chr3R 21506982 intron C15 + chr3R_8_21505001 chr3R_21505001 RAL-911 1616 chr3R 21519970 21520138 chr3R 21520091 21520250 18 118 1.5 1.5 1.5 7.2 280 chr3R 21519970 intergenic not near genes chr3R 21520110 intergenic not near genes chr3R 21520250 intergenic not near genes chr3R_18_21520001 chr3R_21520001 RAL-911 1617 chr3R 21527797 21527846 chr3R 21528154 21528201 11 359 3.0 2.5 2.8 2.9 404 chr3R 21527797 3` UTR CG7956 + chr3R 21527999 3` UTR CG7956 + chr3R 21528201 3` UTR CG7956 + chr3R_11_21525001 chr3R_21525001 RAL-911 1618 chr3R 21652531 21652568 chr3R 21652631 21652668 7 98 3.5 0.0 1.8 2.5 137 chr3R 21652531 intron E2f - chr3R 21652600 intron E2f - chr3R 21652668 intron E2f - chr3R_7_21650001 chr3R_21650001 RAL-911 1619 chr3R 21725669 21725684 chr3R 21725825 21725840 11 156 0.5 10.0 5.2 1.8 171 chr3R 21725669 intergenic not near genes chr3R 21725754 intergenic not near genes chr3R 21725840 intergenic not near genes chr3R_11_21725001 chr3R_21725001 RAL-911 1620 chr3R 21734858 21734866 chr3R 21734954 21734962 4 96 6.0 1.0 3.5 0.9 104 chr3R 21734858 intergenic not near genes chr3R 21734910 intergenic not near genes chr3R 21734962 intergenic not near genes chr3R_4_21730001 chr3R_21730001 RAL-911 1621 chr3R 21784846 21784890 chr3R 21784964 21785005 12 115 1.0 5.5 3.2 2.9 159 chr3R 21784846 3` UTR,3` UTR CASK -,CRG - chr3R 21784926 3` UTR,3` UTR CASK -,CRG - chr3R 21785005 3` UTR,3` UTR CASK -,CRG - chr3R_12_21780001 chr3R_21780001 RAL-911 1622 chr3R 17389054 17389054 chr3R 21907534 21907534 4 4518480 1.0 13.0 7.0 0.5 4518480 chr3R 17389054 intron,3` UTR Brf -,lute + chr3R 19648294 5` UTR CG6195 - chr3R 21907534 intergenic CG6678 + chr3R_4_19645001 chr3R_19645001 RAL-911 1623 chr3R 17389054 17389054 chr3R 21907535 21907535 4 4518481 1.0 12.5 6.8 0.5 4518481 chr3R 17389054 intron,3` UTR Brf -,lute + chr3R 19648294 5` UTR CG6195 - chr3R 21907535 intergenic CG6678 + chr3R_4_19645001 chr3R_19645001 RAL-911 1624 chr3R 19457915 19457915 chr3R 21907535 21907535 4 2449620 11.5 12.5 12.0 0.3 2449620 chr3R 19457915 3` UTR CG31221 + chr3R 20682725 intergenic not near genes chr3R 21907535 intergenic CG6678 + chr3R_4_20680001 chr3R_20680001 RAL-911 1625 chr3R 21337429 21337429 chr3R 21907535 21907535 4 570106 5.0 12.5 8.8 0.4 570106 chr3R 21337429 intron CG16791 - chr3R 21622482 intron E2f - chr3R 21907535 intergenic CG6678 + chr3R_4_21620001 chr3R_21620001 RAL-911 1626 chr3R 21907535 21907535 chr3R 28831801 28831802 20 6924266 14.0 6.5 10.2 1.8 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_20_25365001 chr3R_25365001 RAL-911 1627 chr3R 21907535 21907535 chr3R 29013339 29013339 4 7105804 14.0 9.0 11.5 0.3 7105804 chr3R 21907535 intergenic CG6678 + chr3R 25460437 intron Fur1 - chr3R 29013339 intron wat - chr3R_4_25460001 chr3R_25460001 RAL-911 1628 chr3R 21907536 21907536 chr3R 28831801 28831802 8 6924266 14.0 6.5 10.2 0.7 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_8_25365001 chr3R_25365001 RAL-911 1629 chr3R 21960886 21960925 chr3R 21961096 21961135 9 210 2.0 1.5 1.8 3.2 249 chr3R 21960886 exon Eip93F + chr3R 21961010 intron Eip93F + chr3R 21961135 intron Eip93F + chr3R_9_21960001 chr3R_21960001 RAL-911 1630 chr3R 21985211 21985254 chr3R 21985336 21985379 5 122 1.5 2.0 1.8 1.8 168 chr3R 21985211 intron Eip93F + chr3R 21985295 intron Eip93F + chr3R 21985379 intron Eip93F + chr3R_5_21985001 chr3R_21985001 RAL-911 1631 chr3R 22055564 22055590 chr3R 22055755 22055763 5 195 0.5 1.5 1.0 2.5 199 chr3R 22055564 intron how + chr3R 22055664 intron how + chr3R 22055763 intron how + chr3R_5_22055001 chr3R_22055001 RAL-911 1632 chr3R 22175647 22175678 chr3R 22175984 22176015 7 336 0.0 0.5 0.2 5.8 368 chr3R 22175647 intron SKIP + chr3R 22175831 intron SKIP + chr3R 22176015 intron SKIP + chr3R_7_22175001 chr3R_22175001 RAL-911 1633 chr3R 22234662 22234711 chr3R 22236001 22236028 pogo 11 1327 3.5 1.5 2.5 3.1 1366 chr3R 22234662 intron SKIP + chr3R 22235345 intron SKIP + chr3R 22236028 intron SKIP + chr3R_11_22235001 chr3R_22235001 RAL-911 1634 chr3R 22239471 22239524 chr3R 22248551 22248592 roo 7 9071 6.0 0.0 3.0 1.8 9121 chr3R 22239471 intron SKIP + chr3R 22244032 intron SKIP + chr3R 22248592 intron SKIP + chr3R_7_22240001 chr3R_22240001 RAL-911 1635 chr3R 22248632 22248660 chr3R 22248738 22248764 4 104 2.0 0.5 1.2 1.8 132 chr3R 22248632 intron SKIP + chr3R 22248698 intron SKIP + chr3R 22248764 intron SKIP + chr3R_4_22245001 chr3R_22245001 RAL-911 1636 chr3R 22336913 22336927 chr3R 22337015 22337029 6 102 0.0 3.0 1.5 2.4 116 chr3R 22336913 intron CG5388 - chr3R 22336971 intron CG5388 - chr3R 22337029 intron CG5388 - chr3R_6_22335001 chr3R_22335001 RAL-911 1637 chr3R 22450525 22450576 chr3R 22453185 22453194 NOF 5 2648 1.5 2.5 2.0 1.7 2669 chr3R 22450525 intron CG34376 + chr3R 22451860 intron CG34376 + chr3R 22453194 intron CG34376 + chr3R_5_22450001 chr3R_22450001 RAL-911 1638 chr3R 22675172 22675207 chr3R 22675291 22675333 14 123 2.5 3.5 3.0 3.5 161 chr3R 22675172 intron wake + chr3R 22675252 intron wake + chr3R 22675333 intron wake + chr3R_14_22675001 chr3R_22675001 RAL-911 1639 chr3R 22863902 22863925 chr3R 22863998 22864016 4 92 0.0 0.5 0.2 3.3 114 chr3R 22863902 intergenic not near genes chr3R 22863959 intergenic not near genes chr3R 22864016 intergenic not near genes chr3R_4_22860001 chr3R_22860001 RAL-911 1640 chr3R 22880920 22880952 chr3R 22881078 22881106 10 158 2.0 2.0 2.0 3.3 186 chr3R 22880920 intergenic not near genes chr3R 22881013 intergenic not near genes chr3R 22881106 intergenic not near genes chr3R_10_22880001 chr3R_22880001 RAL-911 1641 chr3R 22881196 22881228 chr3R 22884899 22884949 Doc 5 3720 1.5 1.0 1.2 2.3 3753 chr3R 22881196 intergenic not near genes chr3R 22883072 intergenic not near genes chr3R 22884949 intergenic not near genes chr3R_5_22880001 chr3R_22880001 RAL-911 1642 chr3R 22906616 22906631 chr3R 22906714 22906729 5 95 6.5 2.5 4.5 0.9 113 chr3R 22906616 intron klg + chr3R 22906672 intron klg + chr3R 22906729 intron klg + chr3R_5_22905001 chr3R_22905001 RAL-911 1643 chr3R 23079032 23079084 chr3R 23079172 23079224 15 137 3.0 2.0 2.5 4.3 192 chr3R 23079032 intron CG13830 - chr3R 23079128 intron CG13830 - chr3R 23079224 intron CG13830 - chr3R_15_23075001 chr3R_23075001 RAL-911 1644 chr3R 23086102 23086137 chr3R 23086248 23086283 8 148 1.0 3.5 2.2 2.5 181 chr3R 23086102 intron CG13830 - chr3R 23086192 intron CG13830 - chr3R 23086283 intron CG13830 - chr3R_8_23085001 chr3R_23085001 RAL-911 1645 chr3R 23245962 23245989 chr3R 23246071 23246091 7 107 4.5 0.5 2.5 2.0 129 chr3R 23245962 intron CG4467 - chr3R 23246026 intron CG4467 - chr3R 23246091 intron CG4467 - chr3R_7_23245001 chr3R_23245001 RAL-911 1646 chr3R 23260933 23260981 chr3R 23261035 23261071 12 99 1.5 3.0 2.2 3.8 138 chr3R 23260933 3` UTR orb - chr3R 23261002 3` UTR orb - chr3R 23261071 3` UTR orb - chr3R_12_23260001 chr3R_23260001 RAL-911 1647 chr3R 23318389 23318402 chr3R 23318516 23318529 5 127 0.5 7.5 4.0 1.0 140 chr3R 23318389 intron pnt - chr3R 23318459 intron pnt - chr3R 23318529 intron pnt - chr3R_5_23315001 chr3R_23315001 RAL-911 1648 chr3R 23324028 23324056 chr3R 23324135 23324163 8 107 2.5 1.0 1.8 2.9 135 chr3R 23324028 intron pnt - chr3R 23324096 intron pnt - chr3R 23324163 intron pnt - chr3R_8_23320001 chr3R_23320001 RAL-911 1649 chr3R 23346820 23346873 chr3R 23346918 23346971 11 98 2.0 3.5 2.8 2.9 151 chr3R 23346820 intergenic not near genes chr3R 23346896 intergenic not near genes chr3R 23346971 intergenic not near genes chr3R_11_23345001 chr3R_23345001 RAL-911 1650 chr3R 23363659 23363704 chr3R 23363765 23363810 18 104 6.0 3.5 4.8 3.1 151 chr3R 23363659 intergenic CG4408 - chr3R 23363734 intergenic CG4408 - chr3R 23363810 intergenic CG4408 - chr3R_18_23360001 chr3R_23360001 RAL-911 1651 chr3R 23536930 23536977 chr3R 23537132 23537173 9 200 7.5 4.5 6.0 1.3 243 chr3R 23536930 intergenic CG10168 -,CG16732 - chr3R 23537052 exon CG10168 - chr3R 23537173 exon CG10168 - chr3R_9_23535001 chr3R_23535001 RAL-911 1652 chr3R 23558380 23558416 chr3R 23560180 23560217 Bari1 13 1800 2.5 1.0 1.8 4.6 1837 chr3R 23558380 intron beat-IV + chr3R 23559298 intron beat-IV + chr3R 23560217 intron beat-IV + chr3R_13_23555001 chr3R_23555001 RAL-911 1653 chr3R 23565844 23565861 chr3R 23565951 23565968 4 106 0.0 0.0 0.0 4.0 124 chr3R 23565844 intron beat-IV + chr3R 23565906 intron beat-IV + chr3R 23565968 intron beat-IV + chr3R_4_23565001 chr3R_23565001 RAL-911 1654 chr3R 23629423 23629471 chr3R 23629519 23629567 7 91 2.5 1.5 2.0 2.3 144 chr3R 23629423 intron CG31145 - chr3R 23629495 intron CG31145 - chr3R 23629567 intron CG31145 - chr3R_7_23625001 chr3R_23625001 RAL-911 1655 chr3R 23655461 23655472 chr3R 23655669 23655680 4 208 3.0 4.5 3.8 0.8 219 chr3R 23655461 intron CG31145 - chr3R 23655570 intron CG31145 - chr3R 23655680 intron CG31145 - chr3R_4_23655001 chr3R_23655001 RAL-911 1656 chr3R 23655474 23655499 chr3R 23655667 23655707 9 205 3.0 4.0 3.5 2.0 233 chr3R 23655474 intron CG31145 - chr3R 23655590 intron CG31145 - chr3R 23655707 intron CG31145 - chr3R_9_23655001 chr3R_23655001 RAL-911 1657 chr3R 23663851 23663874 chr3R 23664021 23664052 6 176 3.0 2.0 2.5 1.7 201 chr3R 23663851 intron CG31145 - chr3R 23663952 intron CG31145 - chr3R 23664052 intron CG31145 - chr3R_6_23660001 chr3R_23660001 RAL-911 1658 chr3R 23724871 23724918 chr3R 23724975 23724977 5 78 3.0 1.0 2.0 1.7 106 chr3R 23724871 intron CG10365 + chr3R 23724924 intron CG10365 + chr3R 23724977 intron CG10365 + chr3R_5_23720001 chr3R_23720001 RAL-911 1659 chr3R 23835389 23835428 chr3R 23844559 23844598 roo 11 9167 6.5 6.0 6.2 1.5 9209 chr3R 23835389 intron CG34355 + chr3R 23839994 intron CG34355 + chr3R 23844598 intron CG34355 + chr3R_11_23835001 chr3R_23835001 RAL-911 1660 chr3R 23851069 23851075 chr3R 23858756 23858762 opus 4 7687 5.0 7.0 6.0 0.6 7693 chr3R 23851069 3` UTR CG34355 + chr3R 23854916 intergenic not near genes chr3R 23858762 intergenic not near genes chr3R_4_23850001 chr3R_23850001 RAL-911 1661 chr3R 23944903 23944927 chr3R 23945008 23945027 4 103 3.5 4.0 3.8 0.8 124 chr3R 23944903 intron CG12268 - chr3R 23944965 intron CG12268 - chr3R 23945027 exon CG12268 - chr3R_4_23940001 chr3R_23940001 RAL-911 1662 chr3R 23949040 23949067 chr3R 23949117 23949160 17 90 1.0 4.5 2.8 4.5 120 chr3R 23949040 intergenic not near genes chr3R 23949100 intergenic not near genes chr3R 23949160 intergenic not near genes chr3R_17_23945001 chr3R_23945001 RAL-911 1663 chr3R 24076901 24076940 chr3R 24078387 24078421 hobo 4 1483 4.0 2.0 3.0 1.0 1520 chr3R 24076901 intron 4EHP - chr3R 24077661 intron 4EHP - chr3R 24078421 intron 4EHP - chr3R_4_24075001 chr3R_24075001 RAL-911 1664 chr3R 24199722 24199768 chr3R 24199822 24199843 12 95 2.5 1.5 2.0 4.0 121 chr3R 24199722 intron twin - chr3R 24199782 intron twin - chr3R 24199843 intron twin - chr3R_12_24195001 chr3R_24195001 RAL-911 1665 chr3R 24377767 24377768 chr3R 24377908 24377910 4 142 14.5 0.0 7.2 0.5 143 chr3R 24377767 intergenic CG33342 + chr3R 24377838 intergenic CG33342 + chr3R 24377910 intergenic CG33342 + chr3R_4_24375001 chr3R_24375001 RAL-911 1666 chr3R 24426265 24426315 chr3R 24426542 24426591 14 276 2.5 4.0 3.2 3.3 326 chr3R 24426265 intron nAChRalpha1 - chr3R 24426428 intron nAChRalpha1 - chr3R 24426591 intron nAChRalpha1 - chr3R_14_24425001 chr3R_24425001 RAL-911 1667 chr3R 24431579 24431627 chr3R 24431678 24431724 9 98 2.0 0.0 1.0 4.5 145 chr3R 24431579 intron nAChRalpha1 - chr3R 24431652 intron nAChRalpha1 - chr3R 24431724 intron nAChRalpha1 - chr3R_9_24430001 chr3R_24430001 RAL-911 1668 chr3R 24434227 24434266 chr3R 24434325 24434364 8 92 1.5 4.5 3.0 2.0 137 chr3R 24434227 intron nAChRalpha1 - chr3R 24434296 intron nAChRalpha1 - chr3R 24434364 intron nAChRalpha1 - chr3R_8_24430001 chr3R_24430001 RAL-911 1669 chr3R 24441611 24441641 chr3R 24441908 24441934 7 298 2.0 2.5 2.2 2.2 323 chr3R 24441611 intron nAChRalpha1 - chr3R 24441772 intron nAChRalpha1 - chr3R 24441934 intron nAChRalpha1 - chr3R_7_24440001 chr3R_24440001 RAL-911 1670 chr3R 24466452 24466497 chr3R 24466546 24466595 5 95 1.0 2.0 1.5 2.0 143 chr3R 24466452 intergenic not near genes chr3R 24466524 intergenic not near genes chr3R 24466595 intergenic not near genes chr3R_5_24465001 chr3R_24465001 RAL-911 1671 chr3R 24493264 24493301 chr3R 24493513 24493514 BS 7 239 4.0 2.5 3.2 1.7 250 chr3R 24493264 intergenic not near genes chr3R 24493389 intergenic not near genes chr3R 24493514 intergenic not near genes chr3R_7_24490001 chr3R_24490001 RAL-911 1672 chr3R 24525785 24525840 chr3R 24525885 24525916 8 92 3.5 2.5 3.0 2.0 131 chr3R 24525785 intron CG13618 + chr3R 24525850 intron CG13618 + chr3R 24525916 intron CG13618 + chr3R_8_24525001 chr3R_24525001 RAL-911 1673 chr3R 24527784 24527836 chr3R 24527895 24527902 9 105 0.0 1.0 0.5 6.0 118 chr3R 24527784 intergenic CG13618 +,CG6607 + chr3R 24527843 intergenic CG6607 +,CG13618 + chr3R 24527902 intergenic CG6607 +,CG13618 + chr3R_9_24525001 chr3R_24525001 RAL-911 1674 chr3R 24624365 24624375 chr3R 24624474 24624484 4 109 6.5 2.0 4.2 0.8 119 chr3R 24624365 intron Syx18 - chr3R 24624424 intron Syx18 - chr3R 24624484 exon Syx18 - chr3R_4_24620001 chr3R_24620001 RAL-911 1675 chr3R 24667594 24667618 chr3R 24667690 24667715 7 97 3.5 0.0 1.8 2.5 121 chr3R 24667594 intron slo + chr3R 24667654 intron slo + chr3R 24667715 intron slo + chr3R_7_24665001 chr3R_24665001 RAL-911 1676 chr3R 24785060 24785095 chr3R 24785156 24785191 11 94 5.0 2.0 3.5 2.4 131 chr3R 24785060 3` UTR CG5805 - chr3R 24785126 3` UTR CG5805 - chr3R 24785191 3` UTR CG5805 - chr3R_11_24785001 chr3R_24785001 RAL-911 1677 chr3R 24790658 24790708 chr3R 24790868 24790919 12 210 1.5 4.0 2.8 3.2 261 chr3R 24790658 intron Ets96B + chr3R 24790788 intron Ets96B + chr3R 24790919 intron Ets96B + chr3R_12_24790001 chr3R_24790001 RAL-911 1678 chr3R 24881455 24881504 chr3R 24881574 24881599 5 110 3.0 3.5 3.2 1.2 144 chr3R 24881455 3` UTR CG11089 + chr3R 24881527 3` UTR CG31121 - chr3R 24881599 3` UTR CG31121 - chr3R_5_24880001 chr3R_24880001 RAL-911 1679 chr3R 24927116 24927152 chr3R 24931920 24931926 Doc 8 4800 6.5 1.5 4.0 1.6 4810 chr3R 24927116 intergenic Trf4-2 + chr3R 24929521 intergenic not near genes chr3R 24931926 intergenic CG11771 + chr3R_8_24925001 chr3R_24925001 RAL-911 1680 chr3R 24974901 24974926 chr3R 24975000 24975011 7 92 1.5 3.5 2.5 2.0 110 chr3R 24974901 intergenic not near genes chr3R 24974956 intergenic not near genes chr3R 24975011 intergenic not near genes chr3R_7_24970001 chr3R_24970001 RAL-911 1681 chr3R 25004907 25004921 chr3R 25005010 25005019 4 102 0.0 2.0 1.0 2.0 112 chr3R 25004907 intron tnc + chr3R 25004963 intron tnc + chr3R 25005019 intron tnc + chr3R_4_25000001 chr3R_25000001 RAL-911 1682 chr3R 25018260 25018291 chr3R 25018332 25018388 9 81 3.5 4.0 3.8 1.9 128 chr3R 25018260 exon tnc + chr3R 25018324 exon tnc + chr3R 25018388 exon tnc + chr3R_9_25015001 chr3R_25015001 RAL-911 1683 chr3R 25027547 25027567 chr3R 25027770 25027800 4 230 1.5 4.5 3.0 1.0 253 chr3R 25027547 intron Hr96 + chr3R 25027674 intron Hr96 + chr3R 25027800 intron Hr96 + chr3R_4_25025001 chr3R_25025001 RAL-911 1684 chr3R 25136378 25136425 chr3R 25136478 25136525 13 99 4.0 4.5 4.2 2.5 147 chr3R 25136378 3` UTR Bili + chr3R 25136452 3` UTR Bili + chr3R 25136525 3` UTR Bili + chr3R_13_25135001 chr3R_25135001 RAL-911 1685 chr3R 25235799 25235846 chr3R 25235899 25235946 15 100 3.5 3.0 3.2 3.6 147 chr3R 25235799 intergenic CG10420 - chr3R 25235872 intergenic CG10420 - chr3R 25235946 intergenic CG10420 - chr3R_15_25235001 chr3R_25235001 RAL-911 1686 chr3R 25247624 25247667 chr3R 25247764 25247807 9 140 3.0 4.5 3.8 1.9 183 chr3R 25247624 intergenic Nup37 +,RpS27 - chr3R 25247716 5` UTR Nup37 + chr3R 25247807 intron Nup37 + chr3R_9_25245001 chr3R_25245001 RAL-911 1687 chr3R 25300674 25300692 chr3R 25300790 25300828 7 132 3.5 2.0 2.8 1.8 154 chr3R 25300674 intergenic CG13659 + chr3R 25300751 intergenic CG13659 + chr3R 25300828 intergenic CG13659 + chr3R_7_25300001 chr3R_25300001 RAL-911 1688 chr3R 25328970 25329014 chr3R 25329468 25329513 4 497 2.5 3.5 3.0 1.0 543 chr3R 25328970 exon CHKov1 - chr3R 25329242 5` UTR CHKov1 - chr3R 25329513 intergenic CHKov2 -,CHKov1 - chr3R_4_25325001 chr3R_25325001 RAL-911 1689 chr3R 25368373 25368419 chr3R 25368505 25368616 9 189 2.0 0.0 1.0 4.5 243 chr3R 25368373 intron Fur1 - chr3R 25368494 intron Fur1 - chr3R 25368616 intron Fur1 - chr3R_9_25365001 chr3R_25365001 RAL-911 1690 chr3R 25424653 25424693 chr3R 25424751 25424760 9 93 1.0 3.0 2.0 3.0 107 chr3R 25424653 intron Fur1 - chr3R 25424706 intron Fur1 - chr3R 25424760 intron Fur1 - chr3R_9_25420001 chr3R_25420001 RAL-911 1691 chr3R 25453761 25453798 chr3R 25453952 25453989 10 188 2.0 3.0 2.5 2.9 228 chr3R 25453761 intron Fur1 - chr3R 25453875 intron Fur1 - chr3R 25453989 intron Fur1 - chr3R_10_25450001 chr3R_25450001 RAL-911 1692 chr3R 25514423 25514451 chr3R 25514524 25514538 11 99 0.0 2.5 1.2 5.0 115 chr3R 25514423 intergenic not near genes chr3R 25514480 intergenic not near genes chr3R 25514538 intergenic not near genes chr3R_11_25510001 chr3R_25510001 RAL-911 1693 chr3R 25519059 25519101 chr3R 25519160 25519202 13 99 5.0 4.5 4.8 2.2 143 chr3R 25519059 intron msi + chr3R 25519130 intron msi + chr3R 25519202 intron msi + chr3R_13_25515001 chr3R_25515001 RAL-911 1694 chr3R 25551797 25551826 chr3R 25551893 25551921 9 96 0.5 10.5 5.5 1.4 124 chr3R 25551797 intron msi + chr3R 25551859 intron msi + chr3R 25551921 intron msi + chr3R_9_25550001 chr3R_25550001 RAL-911 1695 chr3R 25671241 25671270 chr3R 25671341 25671382 6 106 0.5 1.0 0.8 3.3 141 chr3R 25671241 intron Lgr3 + chr3R 25671312 intron Lgr3 + chr3R 25671382 intron Lgr3 + chr3R_6_25670001 chr3R_25670001 RAL-911 1696 chr3R 25692031 25692070 chr3R 25692137 25692177 4 103 0.5 6.0 3.2 1.0 146 chr3R 25692031 intergenic not near genes chr3R 25692104 intergenic not near genes chr3R 25692177 intergenic not near genes chr3R_4_25690001 chr3R_25690001 RAL-911 1697 chr3R 25725807 25725844 chr3R 25734987 25735022 roo 10 9178 4.0 4.0 4.0 2.0 9215 chr3R 25725807 intron LpR2 - chr3R 25730414 intron LpR2 - chr3R 25735022 intron LpR2 - chr3R_10_25730001 chr3R_25730001 RAL-911 1698 chr3R 25846546 25846575 chr3R 25846624 25846667 7 87 3.0 2.0 2.5 2.0 121 chr3R 25846546 intergenic CR45654 +,CR45655 + chr3R 25846606 intergenic CR45655 +,CR45654 + chr3R 25846667 intergenic CR45655 +,CR45654 + chr3R_7_25845001 chr3R_25845001 RAL-911 1699 chr3R 25863932 25863972 chr3R 25864040 25864080 10 108 1.0 3.0 2.0 3.3 148 chr3R 25863932 intron CG5890 + chr3R 25864006 intron CG5890 + chr3R 25864080 intron CG5890 + chr3R_10_25860001 chr3R_25860001 RAL-911 1700 chr3R 25871089 25871114 chr3R 25871244 25871259 4 152 7.5 3.5 5.5 0.6 170 chr3R 25871089 3` UTR CG5890 + chr3R 25871174 3` UTR CG5890 + chr3R 25871259 3` UTR CG5890 + chr3R_4_25870001 chr3R_25870001 RAL-911 1701 chr3R 25932738 25932757 chr3R 25933139 25933169 4 409 0.5 0.5 0.5 2.7 431 chr3R 25932738 intron CCAP-R - chr3R 25932954 intron CCAP-R - chr3R 25933169 intron CCAP-R - chr3R_4_25930001 chr3R_25930001 RAL-911 1702 chr3R 25997235 25997252 chr3R 25997342 25997359 6 107 5.0 2.5 3.8 1.2 124 chr3R 25997235 intergenic CG43116 -,E(spl)mdelta-HLH + chr3R 25997297 intergenic CG43116 -,E(spl)mdelta-HLH + chr3R 25997359 intergenic E(spl)mdelta-HLH +,CG43116 - chr3R_6_25995001 chr3R_25995001 RAL-911 1703 chr3R 26060388 26060433 chr3R 26060494 26060539 7 104 4.5 3.5 4.0 1.4 151 chr3R 26060388 intron CG14544 + chr3R 26060464 intron CG14544 + chr3R 26060539 intron CG14544 + chr3R_7_26060001 chr3R_26060001 RAL-911 1704 chr3R 26093828 26093869 chr3R 26093926 26093966 6 98 3.0 0.5 1.8 2.1 138 chr3R 26093828 intron dys - chr3R 26093897 intron dys - chr3R 26093966 intron dys - chr3R_6_26090001 chr3R_26090001 RAL-911 1705 chr3R 26126542 26126565 chr3R 26126637 26126671 4 100 5.0 6.0 5.5 0.6 129 chr3R 26126542 intron CG31324 + chr3R 26126606 intron CG31324 + chr3R 26126671 intron,5` UTR CG31324 +,CG14556 + chr3R_4_26125001 chr3R_26125001 RAL-911 1706 chr3R 26233579 26233615 chr3R 26233853 26233889 12 274 4.5 1.5 3.0 3.0 310 chr3R 26233579 3` UTR CG12290 + chr3R 26233734 3` UTR CG12290 + chr3R 26233889 3` UTR CG12290 + chr3R_12_26230001 chr3R_26230001 RAL-911 1707 chr3R 26239817 26239843 chr3R 26240148 26240174 7 329 4.5 5.0 4.8 1.2 357 chr3R 26239817 intron CR42745 + chr3R 26239996 intron CR42745 + chr3R 26240174 intron CR42745 + chr3R_7_26235001 chr3R_26235001 RAL-911 1708 chr3R 26265800 26265847 chr3R 26265907 26265955 11 100 0.5 2.5 1.5 4.4 155 chr3R 26265800 intron CG6154 + chr3R 26265878 intron CG6154 + chr3R 26265955 intron CG6154 + chr3R_11_26265001 chr3R_26265001 RAL-911 1709 chr3R 26370321 26370352 chr3R 26370424 26370450 8 104 0.0 6.0 3.0 2.0 129 chr3R 26370321 intergenic not near genes chr3R 26370386 intergenic not near genes chr3R 26370450 intergenic not near genes chr3R_8_26370001 chr3R_26370001 RAL-911 1710 chr3R 26376313 26376344 chr3R 26385493 26385503 roo 4 9175 4.0 1.5 2.8 1.1 9190 chr3R 26376313 intergenic not near genes chr3R 26380908 intergenic not near genes chr3R 26385503 intergenic not near genes chr3R_4_26380001 chr3R_26380001 RAL-911 1711 chr3R 26502282 26502304 chr3R 26502393 26502415 8 108 3.0 4.0 3.5 1.8 133 chr3R 26502282 intron plum - chr3R 26502348 intron plum - chr3R 26502415 intron plum - chr3R_8_26500001 chr3R_26500001 RAL-911 1712 chr3R 26510533 26510535 chr3R 26519578 26519597 roo 4 9053 1.0 4.0 2.5 1.1 9064 chr3R 26510533 intron plum - chr3R 26515065 intron plum - chr3R 26519597 intron,5` UTR plum -,CR45226 + chr3R_4_26515001 chr3R_26515001 RAL-911 1713 chr3R 26540977 26541026 chr3R 26541077 26541112 6 97 0.5 2.5 1.5 2.4 135 chr3R 26540977 intron scrib + chr3R 26541044 intron scrib + chr3R 26541112 intron scrib + chr3R_6_26540001 chr3R_26540001 RAL-911 1714 chr3R 26642732 26642756 chr3R 26643145 26643157 jockey 4 410 3.0 8.5 5.8 0.6 425 chr3R 26642732 intergenic not near genes chr3R 26642944 intergenic not near genes chr3R 26643157 intergenic not near genes chr3R_4_26640001 chr3R_26640001 RAL-911 1715 chr3R 26688845 26688861 chr3R 26688943 26688959 8 96 4.0 3.5 3.8 1.7 114 chr3R 26688845 intergenic not near genes chr3R 26688902 intergenic not near genes chr3R 26688959 intergenic not near genes chr3R_8_26685001 chr3R_26685001 RAL-911 1716 chr3R 26806142 26806166 chr3R 26806248 26806285 9 116 3.5 6.5 5.0 1.5 143 chr3R 26806142 intron Tl + chr3R 26806214 intron Tl + chr3R 26806285 intron Tl + chr3R_9_26805001 chr3R_26805001 RAL-911 1717 chr3R 26885683 26885702 chr3R 26885794 26885822 8 112 6.5 2.5 4.5 1.5 139 chr3R 26885683 intron T48 + chr3R 26885752 intron T48 + chr3R 26885822 intron T48 + chr3R_8_26885001 chr3R_26885001 RAL-911 1718 chr3R 26901487 26901541 chr3R 26901591 26901636 5 95 2.5 0.0 1.2 2.3 149 chr3R 26901487 intron T48 + chr3R 26901562 intron T48 + chr3R 26901636 intron T48 + chr3R_5_26900001 chr3R_26900001 RAL-911 1719 chr3R 26908018 26908062 chr3R 26908127 26908160 5 112 1.5 3.0 2.2 1.6 142 chr3R 26908018 intron T48 + chr3R 26908089 intron T48 + chr3R 26908160 intron T48 + chr3R_5_26905001 chr3R_26905001 RAL-911 1720 chr3R 27007389 27007425 chr3R 27016542 27016570 roo 9 9153 2.0 3.0 2.5 2.6 9181 chr3R 27007389 intron RYa-R + chr3R 27011980 intron RYa-R + chr3R 27016570 intron RYa-R + chr3R_9_27010001 chr3R_27010001 RAL-911 1721 chr3R 27027661 27027720 chr3R 27027765 27027778 7 92 1.0 2.5 1.8 2.5 117 chr3R 27027661 intron RYa-R + chr3R 27027720 intron RYa-R + chr3R 27027778 intron RYa-R + chr3R_7_27025001 chr3R_27025001 RAL-911 1722 chr3R 27028707 27028756 chr3R 27028806 27028855 11 98 3.5 1.5 2.5 3.1 148 chr3R 27028707 intron RYa-R + chr3R 27028781 intron RYa-R + chr3R 27028855 intron RYa-R + chr3R_11_27025001 chr3R_27025001 RAL-911 1723 chr3R 27051642 27051681 chr3R 27051753 27051792 8 110 6.0 0.0 3.0 2.0 150 chr3R 27051642 intron RYa-R + chr3R 27051717 intron RYa-R + chr3R 27051792 intron RYa-R + chr3R_8_27050001 chr3R_27050001 RAL-911 1724 chr3R 27140504 27140539 chr3R 27148123 27148169 412 13 7623 2.0 6.5 4.2 2.5 7665 chr3R 27140504 intron CG6051 - chr3R 27144336 intron CG6051 - chr3R 27148169 intron CG6051 - chr3R_13_27140001 chr3R_27140001 RAL-911 1725 chr3R 27137237 27137275 chr3R 27149182 27149220 412 11 11948 37.0 25.0 31.0 0.3 11983 chr3R 27137237 intron CG6051 - chr3R 27143228 intron CG6051 - chr3R 27149220 intron CG6051 - chr3R_11_27140001 chr3R_27140001 RAL-911 1726 chr3R 27342784 27342823 chr3R 27351383 27351419 Tirant 4 8596 2.0 7.5 4.8 0.7 8635 chr3R 27342784 intron CG42534 + chr3R 27347102 intron CG42534 + chr3R 27351419 intron CG42534 + chr3R_4_27345001 chr3R_27345001 RAL-911 1727 chr3R 27420216 27420252 chr3R 27420408 27420408 11 187 4.5 1.5 3.0 2.8 192 chr3R 27420216 intron side - chr3R 27420312 intron side - chr3R 27420408 intron side - chr3R_11_27420001 chr3R_27420001 RAL-911 1728 chr3R 27468438 27468479 chr3R 27468874 27468915 5 435 3.0 1.5 2.2 1.6 477 chr3R 27468438 intergenic not near genes chr3R 27468676 intergenic not near genes chr3R 27468915 intergenic not near genes chr3R_5_27465001 chr3R_27465001 RAL-911 1729 chr3R 27492358 27492405 chr3R 27492465 27492512 10 106 1.0 0.0 0.5 6.7 154 chr3R 27492358 intergenic not near genes chr3R 27492435 intergenic not near genes chr3R 27492512 intergenic not near genes chr3R_10_27490001 chr3R_27490001 RAL-911 1730 chr3R 27496576 27496593 chr3R 27496701 27496718 5 124 5.5 1.5 3.5 1.1 142 chr3R 27496576 intergenic not near genes chr3R 27496647 intergenic not near genes chr3R 27496718 intergenic not near genes chr3R_5_27495001 chr3R_27495001 RAL-911 1731 chr3R 27517423 27517455 chr3R 27517538 27517560 4 113 2.0 2.5 2.2 1.2 137 chr3R 27517423 intergenic CG13972 - chr3R 27517492 intergenic CG13972 - chr3R 27517560 intergenic CG13972 - chr3R_4_27515001 chr3R_27515001 RAL-911 1732 chr3R 27521137 27521185 chr3R 27530365 27530414 roo 20 9229 3.5 6.0 4.8 3.4 9277 chr3R 27521137 intron CG12885 + chr3R 27525776 intron CG12885 + chr3R 27530414 intron CG12885 + chr3R_20_27525001 chr3R_27525001 RAL-911 1733 chr3R 27622212 27622240 chr3R 27622327 27622355 6 113 8.0 2.5 5.2 1.0 143 chr3R 27622212 intron Tusp + chr3R 27622284 intron Tusp + chr3R 27622355 intron Tusp + chr3R_6_27620001 chr3R_27620001 RAL-911 1734 chr3R 27627068 27627108 chr3R 27627190 27627230 5 120 5.0 2.0 3.5 1.1 162 chr3R 27627068 intron Tusp + chr3R 27627149 intron Tusp + chr3R 27627230 intron Tusp + chr3R_5_27625001 chr3R_27625001 RAL-911 1735 chr3R 27705364 27705388 chr3R 27705440 27705455 5 88 1.5 1.5 1.5 2.0 91 chr3R 27705364 exon CG12428 - chr3R 27705410 intron CG12428 - chr3R 27705455 intron CG12428 - chr3R_5_27705001 chr3R_27705001 RAL-911 1736 chr3R 27725551 27725586 chr3R 27731013 27731048 I-element 7 5461 4.0 5.5 4.8 1.2 5497 chr3R 27725551 intergenic not near genes chr3R 27728300 intergenic not near genes chr3R 27731048 intergenic not near genes chr3R_7_27725001 chr3R_27725001 RAL-911 1737 chr3R 27735480 27735502 chr3R 27735689 27735731 5 221 3.0 3.5 3.2 1.2 251 chr3R 27735480 intergenic not near genes chr3R 27735606 intergenic not near genes chr3R 27735731 intergenic not near genes chr3R_5_27735001 chr3R_27735001 RAL-911 1738 chr3R 27799917 27799950 chr3R 27800019 27800052 6 100 4.0 1.0 2.5 1.7 135 chr3R 27799917 intron CG34353 - chr3R 27799984 intron CG34353 - chr3R 27800052 intron CG34353 - chr3R_6_27795001 chr3R_27795001 RAL-911 1739 chr3R 27829887 27829919 chr3R 27829986 27830018 6 99 2.0 0.5 1.2 2.7 131 chr3R 27829887 intron CG34353 - chr3R 27829952 intron CG34353 - chr3R 27830018 intron CG34353 - chr3R_6_27825001 chr3R_27825001 RAL-911 1740 chr3R 27856758 27856783 chr3R 27858255 27858286 hopper2 4 1501 6.5 6.5 6.5 0.5 1528 chr3R 27856758 intron CG34353 - chr3R 27857522 intron CG34353 - chr3R 27858286 intron CG34353 - chr3R_4_27855001 chr3R_27855001 RAL-911 1741 chr3R 27875679 27875729 chr3R 27882754 27882804 297 12 7075 3.5 1.0 2.2 3.8 7125 chr3R 27875679 intron CG34353 - chr3R 27879242 intron CG34353 - chr3R 27882804 intron CG34353 - chr3R_12_27875001 chr3R_27875001 RAL-911 1742 chr3R 27911234 27911260 chr3R 27911326 27911358 6 97 0.0 3.5 1.8 2.1 124 chr3R 27911234 intergenic not near genes chr3R 27911296 intergenic not near genes chr3R 27911358 intergenic not near genes chr3R_6_27910001 chr3R_27910001 RAL-911 1743 chr3R 28054433 28054464 chr3R 28054526 28054560 8 92 0.0 2.5 1.2 3.6 127 chr3R 28054433 intron CG34362 + chr3R 28054496 intron CG34362 + chr3R 28054560 intron CG34362 + chr3R_8_28050001 chr3R_28050001 RAL-911 1744 chr3R 28068490 28068523 chr3R 28073949 28073970 I-element 5 5458 0.0 2.0 1.0 2.5 5480 chr3R 28068490 intron CG34362 + chr3R 28071230 intron CG34362 + chr3R 28073970 intron CG34362 + chr3R_5_28070001 chr3R_28070001 RAL-911 1745 chr3R 28173658 28173693 chr3R 28181108 28181143 mdg1 12 7448 5.0 6.0 5.5 1.8 7485 chr3R 28173658 intron CG34354 + chr3R 28177400 intron CG34354 + chr3R 28181143 intron CG34354 + chr3R_12_28175001 chr3R_28175001 RAL-911 1746 chr3R 28253347 28253361 chr3R 28255848 28255891 jockey 7 2516 1.0 2.5 1.8 2.5 2544 chr3R 28253347 intergenic not near genes chr3R 28254619 intergenic not near genes chr3R 28255891 intergenic not near genes chr3R_7_28250001 chr3R_28250001 RAL-911 1747 chr3R 28302093 28302116 chr3R 28302555 28302578 jockey 8 462 4.0 3.5 3.8 1.7 485 chr3R 28302093 intergenic not near genes chr3R 28302336 intergenic not near genes chr3R 28302578 intergenic not near genes chr3R_8_28300001 chr3R_28300001 RAL-911 1748 chr3R 28331492 28331526 chr3R 28331591 28331625 9 99 5.0 3.0 4.0 1.8 133 chr3R 28331492 intron larp - chr3R 28331558 intron larp - chr3R 28331625 intron larp - chr3R_9_28330001 chr3R_28330001 RAL-911 1749 chr3R 28345631 28345671 chr3R 28345725 28345742 8 90 3.5 1.5 2.5 2.3 111 chr3R 28345631 intergenic Moca-cyp + chr3R 28345686 intergenic not near genes chr3R 28345742 intergenic not near genes chr3R_8_28345001 chr3R_28345001 RAL-911 1750 chr3R 28390123 28390140 chr3R 28390190 28390238 10 82 2.0 2.5 2.2 3.1 115 chr3R 28390123 intergenic not near genes chr3R 28390180 intergenic not near genes chr3R 28390238 intergenic not near genes chr3R_10_28390001 chr3R_28390001 RAL-911 1751 chr3R 28393682 28393728 chr3R 28393802 28393848 10 116 4.5 2.0 3.2 2.4 166 chr3R 28393682 intergenic not near genes chr3R 28393765 intergenic not near genes chr3R 28393848 intergenic not near genes chr3R_10_28390001 chr3R_28390001 RAL-911 1752 chr3R 28478971 28479159 chr3R 28479087 28479238 10 108 2.5 1.5 2.0 3.3 267 chr3R 28478971 intergenic not near genes chr3R 28479104 intergenic not near genes chr3R 28479238 intergenic not near genes chr3R_10_28475001 chr3R_28475001 RAL-911 1753 chr3R 28484353 28484392 chr3R 28486250 28486292 29 1901 78.5 76.0 77.2 0.4 1939 chr3R 28484353 intergenic CG1894 + chr3R 28485322 exon CG1894 + chr3R 28486292 intergenic CG1894 + chr3R_29_28485001 chr3R_28485001 RAL-911 1754 chr3R 28763902 28763913 chr3R 28771365 28771376 Stalker4 5 7463 0.0 11.0 5.5 0.8 7474 chr3R 28763902 intergenic not near genes chr3R 28767639 intergenic not near genes chr3R 28771376 intergenic not near genes chr3R_5_28765001 chr3R_28765001 RAL-911 1755 chr3R 28811552 28811602 chr3R 28811718 28811767 18 164 3.0 4.0 3.5 4.0 215 chr3R 28811552 intergenic wdn - chr3R 28811660 intergenic wdn -,CG1646 + chr3R 28811767 intergenic CG1646 +,wdn - chr3R_18_28810001 chr3R_28810001 RAL-911 1756 chr3R 28814443 28814487 chr3R 28814577 28814581 4 124 2.0 3.5 2.8 1.1 138 chr3R 28814443 3` UTR CG1646 + chr3R 28814512 3` UTR CG1646 + chr3R 28814581 3` UTR CG1646 + chr3R_4_28810001 chr3R_28810001 RAL-911 1757 chr3R 28830868 28830909 chr3R 28830966 28830997 6 96 5.0 1.5 3.2 1.4 129 chr3R 28830868 intron WASp - chr3R 28830932 intron WASp - chr3R 28830997 intron WASp - chr3R_6_28830001 chr3R_28830001 RAL-911 1758 chr3R 21907535 21907536 chr3R 28831799 28831801 12 6924265 14.0 6.5 10.2 1.1 6924266 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831801 intron WASp - chr3R_12_25365001 chr3R_25365001 RAL-911 1759 chr3R 21907534 21907535 chr3R 28831802 28831804 17 6924267 14.0 6.5 10.2 1.5 6924270 chr3R 21907534 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831804 intron WASp - chr3R_17_25365001 chr3R_25365001 RAL-911 1760 chr3R 28950248 28950277 chr3R 28950346 28950381 4 102 4.0 6.0 5.0 0.7 133 chr3R 28950248 intron CG14521 - chr3R 28950314 intron CG14521 - chr3R 28950381 intron CG14521 - chr3R_4_28950001 chr3R_28950001 RAL-911 1761 chr3R 28985026 28985039 chr3R 28985128 28985141 5 102 3.5 2.0 2.8 1.3 115 chr3R 28985026 intergenic not near genes chr3R 28985084 intergenic not near genes chr3R 28985141 intergenic not near genes chr3R_5_28985001 chr3R_28985001 RAL-911 1762 chr3R 29009944 29009970 chr3R 29010060 29010096 8 118 5.0 2.5 3.8 1.7 152 chr3R 29009944 intron wat - chr3R 29010020 intron wat - chr3R 29010096 intron wat - chr3R_8_29010001 chr3R_29010001 RAL-911 1763 chr3R 21907534 21907536 chr3R 29013340 29013340 5 7105805 14.0 8.5 11.2 0.4 7105806 chr3R 21907534 intergenic CG6678 + chr3R 25460437 intron Fur1 - chr3R 29013340 intron wat - chr3R_5_25460001 chr3R_25460001 RAL-911 1764 chr3R 29141545 29141578 chr3R 29141625 29141677 5 83 0.0 3.5 1.8 1.8 132 chr3R 29141545 intron CG14516 + chr3R 29141611 intron CG14516 + chr3R 29141677 intron CG14516 + chr3R_5_29140001 chr3R_29140001 RAL-911 1765 chr3R 29213039 29213075 chr3R 29213142 29213151 12 100 5.5 1.5 3.5 2.7 112 chr3R 29213039 intergenic not near genes chr3R 29213095 intergenic not near genes chr3R 29213151 intergenic not near genes chr3R_12_29210001 chr3R_29210001 RAL-911 1766 chr3R 29240452 29240498 chr3R 29240556 29240602 12 104 5.0 2.5 3.8 2.5 150 chr3R 29240452 intergenic CG31427 -,CG31445 - chr3R 29240527 intergenic CG31445 -,CG31427 - chr3R 29240602 3` UTR CG31445 - chr3R_12_29240001 chr3R_29240001 RAL-911 1767 chr3R 29406628 29406639 chr3R 29407899 29407945 jockey 5 1299 1.0 3.5 2.2 1.6 1317 chr3R 29406628 intron Ptp99A + chr3R 29407286 intron Ptp99A + chr3R 29407945 intron Ptp99A + chr3R_5_29405001 chr3R_29405001 RAL-911 1768 chr3R 29447802 29447840 chr3R 29447929 29447932 4 112 1.0 2.5 1.8 1.4 130 chr3R 29447802 intron Ptp99A + chr3R 29447867 intron Ptp99A + chr3R 29447932 intron Ptp99A + chr3R_4_29445001 chr3R_29445001 RAL-911 1769 chr3R 29566360 29566411 chr3R 29566457 29566508 17 94 4.5 5.5 5.0 2.8 148 chr3R 29566360 intergenic not near genes chr3R 29566434 intergenic not near genes chr3R 29566508 intergenic not near genes chr3R_17_29565001 chr3R_29565001 RAL-911 1770 chr3R 29655630 29655660 chr3R 29655729 29655759 6 99 5.0 0.5 2.8 1.6 129 chr3R 29655630 intron Dop1R2 - chr3R 29655694 intron Dop1R2 - chr3R 29655759 intron Dop1R2 - chr3R_6_29655001 chr3R_29655001 RAL-911 1771 chr3R 29718149 29718190 chr3R 29718306 29718347 6 157 3.5 3.0 3.2 1.4 198 chr3R 29718149 intergenic not near genes chr3R 29718248 intergenic CG15506 + chr3R 29718347 intergenic CG15506 + chr3R_6_29715001 chr3R_29715001 RAL-911 1772 chr3R 29738259 29738301 chr3R 29739729 29739773 hobo 4 1463 2.0 2.5 2.2 1.2 1514 chr3R 29738259 intergenic CG1969 +,CG7598 + chr3R 29739016 intron CG1969 + chr3R 29739773 5` UTR CG1969 + chr3R_4_29735001 chr3R_29735001 RAL-911 1773 chr3R 29831791 29831835 chr3R 29831896 29831930 12 97 3.0 1.0 2.0 4.0 139 chr3R 29831791 exon Atg16 - chr3R 29831860 intron Atg16 - chr3R 29831930 exon Atg16 - chr3R_12_29830001 chr3R_29830001 RAL-911 1774 chr3R 29881002 29881035 chr3R 29881108 29881128 12 102 4.0 3.0 3.5 2.7 126 chr3R 29881002 intron CG31038 + chr3R 29881065 intron CG31038 + chr3R 29881128 intron CG31038 + chr3R_12_29880001 chr3R_29880001 RAL-911 1775 chr3R 29882007 29882035 chr3R 29891184 29891212 roo 7 9175 4.0 5.0 4.5 1.3 9205 chr3R 29882007 intron CG31038 + chr3R 29886610 intron CG31038 + chr3R 29891212 intron CG31038 + chr3R_7_29885001 chr3R_29885001 RAL-911 1776 chr3R 29958313 29958340 chr3R 29958408 29958449 7 105 2.0 2.5 2.2 2.2 136 chr3R 29958313 intron TkR99D - chr3R 29958381 intron TkR99D - chr3R 29958449 intron TkR99D - chr3R_7_29955001 chr3R_29955001 RAL-911 1777 chr3R 30013370 30013382 chr3R 30013488 30013500 4 115 8.0 1.5 4.8 0.7 130 chr3R 30013370 intron CG7920 - chr3R 30013435 intron CG7920 - chr3R 30013500 intron CG7920 - chr3R_4_30010001 chr3R_30010001 RAL-911 1778 chr3R 30013384 30013405 chr3R 30013487 30013511 4 100 4.0 1.5 2.8 1.1 127 chr3R 30013384 intron CG7920 - chr3R 30013448 intron CG7920 - chr3R 30013511 intron CG7920 - chr3R_4_30010001 chr3R_30010001 RAL-911 1779 chr3R 30084836 30084879 chr3R 30086321 30086343 hobo 4 1478 3.0 1.0 2.0 1.3 1507 chr3R 30084836 intron sima + chr3R 30085590 intron sima + chr3R 30086343 intron sima + chr3R_4_30085001 chr3R_30085001 RAL-911 1780 chr3R 30124965 30124975 chr3R 30125038 30125057 4 80 0.0 4.0 2.0 1.3 92 chr3R 30124965 intergenic CG45073 - chr3R 30125011 intergenic CG45073 - chr3R 30125057 intergenic CG45073 - chr3R_4_30125001 chr3R_30125001 RAL-911 1781 chr3R 30183195 30183235 chr3R 30183324 30183359 7 128 4.0 4.5 4.2 1.3 164 chr3R 30183195 intergenic not near genes chr3R 30183277 intergenic not near genes chr3R 30183359 intergenic CR44262 - chr3R_7_30180001 chr3R_30180001 RAL-911 1782 chr3R 30224631 30224643 chr3R 30224729 30224741 6 98 3.5 1.0 2.2 1.9 110 chr3R 30224631 intergenic not near genes chr3R 30224686 intergenic not near genes chr3R 30224741 intergenic not near genes chr3R_6_30220001 chr3R_30220001 RAL-911 1783 chr3R 30238742 30238779 chr3R 30239926 30239964 1360 6 1184 3.5 0.0 1.8 2.1 1222 chr3R 30238742 intergenic not near genes chr3R 30239353 intergenic not near genes chr3R 30239964 intergenic not near genes chr3R_6_30235001 chr3R_30235001 RAL-911 1784 chr3R 30259499 30259536 chr3R 30260570 30260609 4 1065 15.0 11.0 13.0 0.3 1110 chr3R 30259499 intergenic not near genes chr3R 30260054 intergenic not near genes chr3R 30260609 intergenic not near genes chr3R_4_30260001 chr3R_30260001 RAL-911 1785 chr3R 30259311 30259341 chr3R 30260996 30261036 6 1690 15.5 27.0 21.2 0.3 1725 chr3R 30259311 intergenic not near genes chr3R 30260174 intergenic not near genes chr3R 30261036 intergenic not near genes chr3R_6_30260001 chr3R_30260001 RAL-911 1786 chr3R 30273582 30273623 chr3R 30273695 30273736 8 112 2.5 4.0 3.2 1.9 154 chr3R 30273582 intergenic not near genes chr3R 30273659 intergenic not near genes chr3R 30273736 intergenic not near genes chr3R_8_30270001 chr3R_30270001 RAL-911 1787 chr3R 30307141 30307150 chr3R 30307201 30307225 4 84 2.0 3.0 2.5 1.1 84 chr3R 30307141 intron hdc + chr3R 30307183 intron hdc + chr3R 30307225 intron hdc + chr3R_4_30305001 chr3R_30305001 RAL-911 1788 chr3R 30375526 30375568 chr3R 30383169 30383210 412 8 7642 4.0 2.0 3.0 2.0 7684 chr3R 30375526 intergenic not near genes chr3R 30379368 intergenic not near genes chr3R 30383210 intergenic not near genes chr3R_8_30375001 chr3R_30375001 RAL-911 1789 chr3R 30396198 30396239 chr3R 30404484 30404524 roo 7 8285 4.5 4.0 4.2 1.3 8326 chr3R 30396198 intergenic not near genes chr3R 30400361 intergenic not near genes chr3R 30404524 5` UTR CR45570 + chr3R_7_30400001 chr3R_30400001 RAL-911 1790 chr3R 30412583 30412629 chr3R 30412992 30413004 11 406 6.5 3.0 4.8 1.9 421 chr3R 30412583 intergenic not near genes chr3R 30412794 intergenic not near genes chr3R 30413004 intergenic not near genes chr3R_11_30410001 chr3R_30410001 RAL-911 1791 chr3R 30456378 30456391 chr3R 30456478 30456491 6 100 4.0 4.0 4.0 1.2 113 chr3R 30456378 intergenic CG2224 - chr3R 30456434 intergenic CG2224 - chr3R 30456491 3` UTR CG2224 - chr3R_6_30455001 chr3R_30455001 RAL-911 1792 chr3R 30456399 30456424 chr3R 30456473 30456474 5 81 2.0 2.0 2.0 1.7 75 chr3R 30456399 intergenic CG2224 - chr3R 30456436 intergenic CG2224 - chr3R 30456474 3` UTR CG2224 - chr3R_5_30455001 chr3R_30455001 RAL-911 1793 chr3R 30458002 30458045 chr3R 30458093 30458145 13 96 4.5 3.0 3.8 2.7 143 chr3R 30458002 intron CG2224 - chr3R 30458074 intron CG2224 - chr3R 30458145 intron CG2224 - chr3R_13_30455001 chr3R_30455001 RAL-911 1794 chr3R 30485020 30485065 chr3R 30485116 30485161 17 94 1.5 4.5 3.0 4.2 141 chr3R 30485020 intron PH4alphaEFB + chr3R 30485090 intron PH4alphaEFB + chr3R 30485161 intron PH4alphaEFB + chr3R_17_30485001 chr3R_30485001 RAL-911 1795 chr3R 30539704 30539747 chr3R 30540369 30540412 5 663 0.5 2.5 1.5 2.0 708 chr3R 30539704 intron tmod + chr3R 30540058 intron tmod + chr3R 30540412 intron tmod + chr3R_5_30540001 chr3R_30540001 RAL-911 1796 chr3R 30548993 30549030 chr3R 30549105 30549142 9 112 2.0 4.0 3.0 2.2 149 chr3R 30548993 intron tmod + chr3R 30549068 intron tmod + chr3R 30549142 intron tmod + chr3R_9_30545001 chr3R_30545001 RAL-911 1797 chr3R 30571685 30571715 chr3R 30571785 30571814 10 100 0.0 1.0 0.5 6.7 129 chr3R 30571685 intron tmod + chr3R 30571750 intron tmod + chr3R 30571814 exon tmod + chr3R_10_30570001 chr3R_30570001 RAL-911 1798 chr3R 30627592 30627626 chr3R 30627683 30627688 5 82 4.0 2.0 3.0 1.2 96 chr3R 30627592 3` UTR CG2267 - chr3R 30627640 exon CG2267 - chr3R 30627688 exon CG2267 - chr3R_5_30625001 chr3R_30625001 RAL-911 1799 chr3R 30850249 30850264 chr3R 30850358 30850377 6 112 0.0 5.5 2.8 1.6 128 chr3R 30850249 intergenic not near genes chr3R 30850313 intergenic not near genes chr3R 30850377 intergenic not near genes chr3R_6_30850001 chr3R_30850001 RAL-911 1800 chr3R 30862420 30862452 chr3R 30862548 30862580 7 124 0.5 6.0 3.2 1.7 160 chr3R 30862420 intergenic not near genes chr3R 30862500 intergenic not near genes chr3R 30862580 intergenic not near genes chr3R_7_30860001 chr3R_30860001 RAL-911 1801 chr3R 31074212 31074258 chr3R 31081830 31081876 springer 5 7618 2.0 2.5 2.2 1.6 7664 chr3R 31074212 intron Sox100B + chr3R 31078044 intron Sox100B + chr3R 31081876 intron Sox100B + chr3R_5_31075001 chr3R_31075001 RAL-911 1802 chr3R 31084899 31084916 chr3R 31084986 31085012 7 92 3.5 2.5 3.0 1.8 113 chr3R 31084899 intergenic not near genes chr3R 31084956 intergenic not near genes chr3R 31085012 intergenic not near genes chr3R_7_31080001 chr3R_31080001 RAL-911 1803 chr3R 31137135 31137181 chr3R 31137235 31137281 11 94 2.0 1.5 1.8 3.9 146 chr3R 31137135 intron Gycbeta100B + chr3R 31137208 intron Gycbeta100B + chr3R 31137281 intron Gycbeta100B + chr3R_11_31135001 chr3R_31135001 RAL-911 1804 chr3R 31486145 31486181 chr3R 31486246 31486252 8 94 2.5 8.0 5.2 1.3 107 chr3R 31486145 intergenic not near genes chr3R 31486198 intergenic not near genes chr3R 31486252 intergenic not near genes chr3R_8_31485001 chr3R_31485001 RAL-911 1805 chr3R 31610101 31610141 chr3R 31610207 31610247 15 106 2.5 5.0 3.8 3.1 146 chr3R 31610101 intron CycG - chr3R 31610174 intron CycG - chr3R 31610247 intron CycG - chr3R_15_31610001 chr3R_31610001 RAL-911 1806 chr3R 31699701 31699733 chr3R 31699803 31699804 4 92 2.5 1.0 1.8 1.4 103 chr3R 31699701 intergenic not near genes chr3R 31699752 intergenic not near genes chr3R 31699804 intergenic not near genes chr3R_4_31695001 chr3R_31695001 RAL-911 1807 chr3R 31774854 31774893 chr3R 31775019 31775036 9 161 3.0 2.5 2.8 2.4 182 chr3R 31774854 3` UTR sip3 + chr3R 31774945 3` UTR sip3 + chr3R 31775036 3` UTR sip3 + chr3R_9_31770001 chr3R_31770001 RAL-911 1808 chr3R 31858130 31858152 chr3R 31858227 31858248 4 97 3.5 1.5 2.5 1.1 118 chr3R 31858130 intron heph - chr3R 31858189 intron heph - chr3R 31858248 intron heph - chr3R_4_31855001 chr3R_31855001 RAL-911 1809 chr3R 31997981 31998022 chr3R 32005471 32005512 blood 6 7484 1.5 5.5 3.5 1.3 7531 chr3R 31997981 intron heph - chr3R 32001746 intron heph - chr3R 32005512 intron heph - chr3R_6_32000001 chr3R_32000001 RAL-911 1810 chr4 76473 76514 chr4 81936 81962 I-element 6 5459 2.0 3.0 2.5 1.7 5489 chr4 76473 intron pan + chr4 79218 intron pan + chr4 81962 intron pan + chr4_6_75001 chr4_75001 RAL-911 1811 chr4 257383 257433 chr4 257573 257623 15 190 1.5 1.5 1.5 6.0 240 chr4 257383 exon RhoGAP102A + chr4 257503 intron RhoGAP102A + chr4 257623 intron RhoGAP102A + chr4_15_255001 chr4_255001 RAL-911 1812 chr4 314493 314530 chr4 314591 314628 12 98 2.5 4.5 3.5 2.7 135 chr4 314493 intergenic Zip102B -,CG32850 + chr4 314560 intergenic CG32850 +,Zip102B - chr4 314628 intergenic CG32850 + chr4_12_310001 chr4_310001 RAL-911 1813 chr4 319972 319998 chr4 328168 328194 Stalker2 8 8196 4.5 6.0 5.2 1.3 8222 chr4 319972 3` UTR CG32850 + chr4 324083 intron CG32850 + chr4 328194 3` UTR,3` UTR CG32850 +,PMCA - chr4_8_320001 chr4_320001 RAL-911 1814 chr4 320000 320019 chr4 328165 328215 Stalker2 11 8193 3.5 5.5 4.5 2.0 8215 chr4 320000 3` UTR CG32850 + chr4 324108 intron CG32850 + chr4 328215 3` UTR,3` UTR CG32850 +,PMCA - chr4_11_320001 chr4_320001 RAL-911 1815 chr4 671590 671629 chr4 680189 680200 Tirant 4 8592 3.5 5.0 4.2 0.8 8610 chr4 671590 intron CG11360 + chr4 675895 intron CG11360 + chr4 680200 intron CG11360 + chr4_4_675001 chr4_675001 RAL-911 1816 chr4 726643 726691 chr4 726753 726801 13 109 4.0 5.0 4.5 2.4 158 chr4 726643 intron bt + chr4 726722 intron bt + chr4 726801 intron bt + chr4_13_725001 chr4_725001 RAL-911 1817 chr4 959605 959643 chr4 959804 959841 14 194 3.0 5.0 4.0 2.8 236 chr4 959605 intergenic CR44030 +,CR45201 - chr4 959723 5` UTR CR44030 + chr4 959841 5` UTR CR44030 + chr4_14_955001 chr4_955001 RAL-911 1818 chr4 972481 972522 chr4 972573 972624 17 99 5.0 5.0 5.0 2.8 143 chr4 972481 intron fuss - chr4 972552 intron fuss - chr4 972624 intron fuss - chr4_17_970001 chr4_970001 RAL-911 1819 chrX 295862 295882 chrX 303493 303522 412 6 7637 2.5 4.0 3.2 1.4 7660 chrX 295862 intron CG3777 + chrX 299692 intron CG3777 + chrX 303522 intron CG3777 + chrX_6_295001 chrX_295001 RAL-911 1820 chrX 318454 318487 chrX 323560 323578 flea 6 5103 4.0 5.5 4.8 1.0 5124 chrX 318454 intron,intron CG3777 +,CG32816 - chrX 321016 intron,intron CG3777 +,CG32816 - chrX 323578 intron,intron CG3777 +,CG32816 - chrX_6_320001 chrX_320001 RAL-911 1821 chrX 428427 428443 chrX 434632 434647 3S18 5 6205 6.0 4.5 5.2 0.8 6220 chrX 428427 intron CG32816 - chrX 431537 intron CG32816 - chrX 434647 intron CG32816 - chrX_5_430001 chrX_430001 RAL-911 1822 chrX 672948 672953 chrX 673046 673051 4 98 3.5 7.0 5.2 0.6 103 chrX 672948 intergenic not near genes chrX 673000 intergenic not near genes chrX 673051 intergenic not near genes chrX_4_670001 chrX_670001 RAL-911 1823 chrX 685247 685260 chrX 685324 685363 5 97 2.5 2.0 2.2 1.6 116 chrX 685247 intergenic not near genes chrX 685305 intergenic not near genes chrX 685363 intergenic not near genes chrX_5_685001 chrX_685001 RAL-911 1824 chrX 706803 706829 chrX 707187 707209 4 380 0.0 4.5 2.2 1.2 406 chrX 706803 intron sdk + chrX 707006 intron sdk + chrX 707209 intron sdk + chrX_4_705001 chrX_705001 RAL-911 1825 chrX 812264 812298 chrX 817905 817949 297 5 5649 3.0 4.0 3.5 1.1 5685 chrX 812264 intron CG43867 - chrX 815106 intron CG43867 - chrX 817949 intron CG43867 - chrX_5_815001 chrX_815001 RAL-911 1826 chrX 827593 827633 chrX 835394 835445 roo 8 7809 3.0 5.5 4.2 1.5 7852 chrX 827593 intron CG43867 - chrX 831519 intron CG43867 - chrX 835445 intron CG43867 - chrX_8_830001 chrX_830001 RAL-911 1827 chrX 882230 882261 chrX 882328 882368 6 105 1.5 2.5 2.0 2.0 138 chrX 882230 intron CG43867 - chrX 882299 intron CG43867 - chrX 882368 intron CG43867 - chrX_6_880001 chrX_880001 RAL-911 1828 chrX 1022728 1022748 chrX 1022864 1022885 4 144 4.0 1.5 2.8 1.1 157 chrX 1022728 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX 1022806 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX 1022885 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX_4_1020001 chrX_1020001 RAL-911 1829 chrX 1357781 1357805 chrX 1367947 1367995 Doc 6 10184 3.5 5.0 4.2 1.2 10214 chrX 1357781 intergenic png - chrX 1362888 intergenic not near genes chrX 1367995 intergenic not near genes chrX_6_1360001 chrX_1360001 RAL-911 1830 chrX 1518024 1518065 chrX 1523445 1523487 jockey 5 5420 4.0 4.0 4.0 1.0 5463 chrX 1518024 intergenic inc + chrX 1520756 intergenic not near genes chrX 1523487 intergenic not near genes chrX_5_1520001 chrX_1520001 RAL-911 1831 chrX 1930520 1930570 chrX 1938111 1938160 opus 8 7591 5.5 5.0 5.2 1.3 7640 chrX 1930520 intergenic CG11596 + chrX 1934340 intergenic not near genes chrX 1938160 3` UTR CG3857 - chrX_8_1930001 chrX_1930001 RAL-911 1832 chrX 2069352 2069404 chrX 2069468 2069514 18 117 2.0 1.5 1.8 6.4 162 chrX 2069352 intron,exon CG4199 -,CG4194 + chrX 2069433 intron,3` UTR CG4199 -,CG4194 + chrX 2069514 intron,3` UTR CG4199 -,CG4194 + chrX_18_2065001 chrX_2065001 RAL-911 1833 chrX 2429652 2429668 chrX 2429753 2429769 6 101 0.0 2.5 1.2 2.7 117 chrX 2429652 intergenic not near genes chrX 2429710 intergenic not near genes chrX 2429769 intergenic not near genes chrX_6_2425001 chrX_2425001 RAL-911 1834 chrX 2559368 2559388 chrX 2559474 2559496 4 104 1.0 4.5 2.8 1.1 128 chrX 2559368 intron Pdfr + chrX 2559432 intron Pdfr + chrX 2559496 intron Pdfr + chrX_4_2555001 chrX_2555001 RAL-911 1835 chrX 2664369 2664406 chrX 2665535 2665566 1360 6 1165 2.0 2.0 2.0 2.0 1197 chrX 2664369 intron sgg + chrX 2664968 intron sgg + chrX 2665566 intron sgg + chrX_6_2660001 chrX_2660001 RAL-911 1836 chrX 2900295 2900324 chrX 2900535 2900562 4 240 1.5 4.0 2.8 1.1 267 chrX 2900295 intron kirre + chrX 2900428 intron kirre + chrX 2900562 intron kirre + chrX_4_2900001 chrX_2900001 RAL-911 1837 chrX 3058002 3058050 chrX 3058260 3058311 pogo 11 260 1.5 2.5 2.0 3.7 309 chrX 3058002 intron kirre + chrX 3058156 intron kirre + chrX 3058311 intron kirre + chrX_11_3055001 chrX_3055001 RAL-911 1838 chrX 3218486 3218539 chrX 3227655 3227708 roo 9 9169 3.0 2.5 2.8 2.4 9222 chrX 3218486 intron dnc + chrX 3223097 intron dnc + chrX 3227708 intron dnc + chrX_9_3220001 chrX_3220001 RAL-911 1839 chrX 3306326 3306374 chrX 3306428 3306476 8 102 3.0 2.0 2.5 2.3 150 chrX 3306326 intron dnc + chrX 3306401 intron dnc + chrX 3306476 intron dnc + chrX_8_3305001 chrX_3305001 RAL-911 1840 chrX 3408984 3409016 chrX 3409079 3409113 9 92 0.5 1.5 1.0 4.5 129 chrX 3408984 intron,intron CR44999 +,CG12535 - chrX 3409048 intron,intron CR44999 +,CG12535 - chrX 3409113 intron,intron CR44999 +,CG12535 - chrX_9_3405001 chrX_3405001 RAL-911 1841 chrX 3415003 3415051 chrX 3421208 3421226 3S18 6 6198 1.5 4.0 2.8 1.6 6223 chrX 3415003 intron,intron CR44999 +,CG12535 - chrX 3418114 intron,intron CR44999 +,CG12535 - chrX 3421226 intron,intron CR44999 +,CG12535 - chrX_6_3415001 chrX_3415001 RAL-911 1842 chrX 3459962 3459994 chrX 3460059 3460091 9 95 7.0 0.5 3.8 1.9 129 chrX 3459962 intron,intron CR44999 +,CG16782 - chrX 3460026 intron,5` UTR CR44999 +,CG16782 - chrX 3460091 intron,5` UTR CR44999 +,CG16782 - chrX_9_3460001 chrX_3460001 RAL-911 1843 chrX 3476321 3476365 chrX 3476423 3476469 11 101 0.5 1.0 0.8 6.1 148 chrX 3476321 intron CR44999 + chrX 3476395 intron CR44999 + chrX 3476469 intron,3` UTR CR44999 +,CG10804 - chrX_11_3475001 chrX_3475001 RAL-911 1844 chrX 3481738 3481773 chrX 3481834 3481850 10 93 3.5 2.5 3.0 2.5 112 chrX 3481738 intron,intron CR44999 +,CG10804 - chrX 3481794 intron,intron CR44999 +,CG10804 - chrX 3481850 intron,intron CR44999 +,CG10804 - chrX_10_3480001 chrX_3480001 RAL-911 1845 chrX 3493089 3493107 chrX 3502267 3502276 roo 4 9176 2.0 1.5 1.8 1.4 9187 chrX 3493089 intron,intron CR44999 +,Gas8 - chrX 3497682 intron,intron CR44999 +,Gas8 - chrX 3502276 intron,intron CR44999 +,Gas8 - chrX_4_3495001 chrX_3495001 RAL-911 1846 chrX 3513753 3513771 chrX 3513842 3513874 4 100 3.5 0.5 2.0 1.3 121 chrX 3513753 intron,intron CR44999 +,CG32791 - chrX 3513814 intron,intron CR44999 +,CG32791 - chrX 3513874 intron,intron CR44999 +,CG32791 - chrX_4_3510001 chrX_3510001 RAL-911 1847 chrX 3535406 3535433 chrX 3535517 3535544 6 107 0.5 3.0 1.8 2.1 138 chrX 3535406 intron CG32791 - chrX 3535475 intron CG32791 - chrX 3535544 intron CG32791 - chrX_6_3535001 chrX_3535001 RAL-911 1848 chrX 3842317 3842353 chrX 3842578 3842614 pogo 7 261 1.0 4.5 2.8 1.8 297 chrX 3842317 intron ec + chrX 3842466 intron ec + chrX 3842614 intron ec + chrX_7_3840001 chrX_3840001 RAL-911 1849 chrX 3862807 3862845 chrX 3862911 3862949 10 103 2.0 3.5 2.8 2.6 142 chrX 3862807 intergenic yin - chrX 3862878 intergenic yin - chrX 3862949 intergenic yin - chrX_10_3860001 chrX_3860001 RAL-911 1850 chrX 3881251 3881294 chrX 3881410 3881453 5 156 0.5 0.0 0.2 4.2 202 chrX 3881251 intron VhaAC39-1 + chrX 3881352 intron VhaAC39-1 + chrX 3881453 exon VhaAC39-1 + chrX_5_3880001 chrX_3880001 RAL-911 1851 chrX 3986854 3986879 chrX 3994501 3994520 412 5 7642 1.0 0.0 0.5 3.3 7666 chrX 3986854 intergenic not near genes chrX 3990687 intergenic not near genes chrX 3994520 intergenic not near genes chrX_5_3990001 chrX_3990001 RAL-911 1852 chrX 4047450 4047500 chrX 4047583 4047605 6 124 1.5 0.5 1.0 3.0 155 chrX 4047450 intergenic CR45482 - chrX 4047528 intergenic CR45482 - chrX 4047605 3` UTR CR45482 - chrX_6_4045001 chrX_4045001 RAL-911 1853 chrX 4048486 4048520 chrX 4048582 4048616 7 96 6.0 1.5 3.8 1.5 130 chrX 4048486 3` UTR CR45482 - chrX 4048551 3` UTR CR45482 - chrX 4048616 3` UTR CR45482 - chrX_7_4045001 chrX_4045001 RAL-911 1854 chrX 4132656 4132697 chrX 4132845 4132884 7 189 2.0 2.0 2.0 2.3 228 chrX 4132656 3` UTR GlcAT-I + chrX 4132770 3` UTR GlcAT-I + chrX 4132884 intergenic Fas2 -,GlcAT-I + chrX_7_4130001 chrX_4130001 RAL-911 1855 chrX 4229971 4229990 chrX 4230102 4230126 5 135 1.0 1.5 1.2 2.3 155 chrX 4229971 intergenic not near genes chrX 4230048 intergenic not near genes chrX 4230126 intergenic not near genes chrX_5_4230001 chrX_4230001 RAL-911 1856 chrX 4396973 4397007 chrX 4397078 4397112 8 97 2.0 1.5 1.8 2.9 139 chrX 4396973 intron CR32773 - chrX 4397042 intron CR32773 - chrX 4397112 intron CR32773 - chrX_8_4395001 chrX_4395001 RAL-911 1857 chrX 4497910 4497939 chrX 4498002 4498037 6 97 2.5 0.5 1.5 2.4 127 chrX 4497910 intron CR32773 - chrX 4497974 intron CR32773 - chrX 4498037 intron CR32773 - chrX_6_4495001 chrX_4495001 RAL-911 1858 chrX 4693764 4693771 chrX 4693852 4693852 4 99 0.0 2.0 1.0 2.0 88 chrX 4693764 intron ctp + chrX 4693808 intron ctp + chrX 4693852 intron ctp + chrX_4_4690001 chrX_4690001 RAL-911 1859 chrX 4700375 4700420 chrX 4700733 4700750 jockey 7 354 0.5 2.5 1.5 2.8 375 chrX 4700375 3` UTR ctp + chrX 4700562 3` UTR ctp + chrX 4700750 3` UTR ctp + chrX_7_4700001 chrX_4700001 RAL-911 1860 chrX 4731800 4731846 chrX 4736908 4736925 jockey 4 5089 2.0 2.5 2.2 1.2 5125 chrX 4731800 intergenic not near genes chrX 4734362 intergenic not near genes chrX 4736925 intergenic not near genes chrX_4_4730001 chrX_4730001 RAL-911 1861 chrX 4744142 4744169 chrX 4744260 4744287 4 118 0.5 0.0 0.2 3.3 145 chrX 4744142 intergenic not near genes chrX 4744214 intergenic not near genes chrX 4744287 intergenic not near genes chrX_4_4740001 chrX_4740001 RAL-911 1862 chrX 4763243 4763276 chrX 4763751 4763781 Stalker4 7 502 3.5 5.5 4.5 1.3 538 chrX 4763243 intergenic not near genes chrX 4763512 intergenic not near genes chrX 4763781 intergenic not near genes chrX_7_4760001 chrX_4760001 RAL-911 1863 chrX 4848764 4848788 chrX 4848886 4848901 7 121 3.0 3.5 3.2 1.7 137 chrX 4848764 intron CG42594 + chrX 4848832 intron CG42594 + chrX 4848901 intron CG42594 + chrX_7_4845001 chrX_4845001 RAL-911 1864 chrX 4943895 4943915 chrX 4944012 4944027 6 116 2.5 5.0 3.8 1.2 132 chrX 4943895 intron Ptp4E + chrX 4943961 intron Ptp4E + chrX 4944027 intron Ptp4E + chrX_6_4940001 chrX_4940001 RAL-911 1865 chrX 4975575 4975613 chrX 4975772 4975810 10 195 0.0 1.5 0.8 5.6 235 chrX 4975575 intron CR44833 - chrX 4975692 intron CR44833 - chrX 4975810 intron CR44833 - chrX_10_4975001 chrX_4975001 RAL-911 1866 chrX 4990024 4990075 chrX 4997257 4997293 roo 9 7229 1.5 1.0 1.2 4.1 7269 chrX 4990024 intron CR44833 - chrX 4993658 intron CR44833 - chrX 4997293 intron CR44833 - chrX_9_4990001 chrX_4990001 RAL-911 1867 chrX 5054462 5054481 chrX 5054564 5054578 4 101 3.5 0.5 2.0 1.3 116 chrX 5054462 intron,intron CR44833 -,ovo + chrX 5054520 intron,intron CR44833 -,ovo + chrX 5054578 intron,intron CR44833 -,ovo + chrX_4_5050001 chrX_5050001 RAL-911 1868 chrX 5055851 5055875 chrX 5056003 5056011 5 145 5.5 2.0 3.8 1.0 160 chrX 5055851 intron,intron CR44833 -,ovo + chrX 5055931 intron,intron CR44833 -,ovo + chrX 5056011 intron,intron CR44833 -,ovo + chrX_5_5055001 chrX_5055001 RAL-911 1869 chrX 5096298 5096303 chrX 5103860 5103888 springer 4 7576 2.0 3.0 2.5 1.1 7590 chrX 5096298 intron,intron CG15465 +,rg + chrX 5100093 intron,intron CG15465 +,rg + chrX 5103888 intron,intron CG15465 +,rg + chrX_4_5100001 chrX_5100001 RAL-911 1870 chrX 5323056 5323103 chrX 5323337 5323400 9 287 3.5 0.0 1.8 3.2 344 chrX 5323056 intergenic Rnp4F - chrX 5323228 intergenic not near genes chrX 5323400 intergenic Mcm3 + chrX_9_5320001 chrX_5320001 RAL-911 1871 chrX 5469622 5469630 chrX 5469781 5469806 4 170 3.0 0.5 1.8 1.4 184 chrX 5469622 intron SPR + chrX 5469714 intron SPR + chrX 5469806 intron SPR + chrX_4_5465001 chrX_5465001 RAL-911 1872 chrX 5473566 5473614 chrX 5473661 5473685 7 92 4.0 1.0 2.5 2.0 119 chrX 5473566 intron SPR + chrX 5473626 intron SPR + chrX 5473685 intron SPR + chrX_7_5470001 chrX_5470001 RAL-911 1873 chrX 5481067 5481085 chrX 5485055 5485073 I-element 7 3988 0.5 8.5 4.5 1.3 4006 chrX 5481067 intron SPR + chrX 5483070 intron SPR + chrX 5485073 intron SPR + chrX_7_5480001 chrX_5480001 RAL-911 1874 chrX 5512017 5512064 chrX 5512138 5512186 4 123 1.0 3.0 2.0 1.3 169 chrX 5512017 intergenic not near genes chrX 5512102 intergenic not near genes chrX 5512186 intergenic not near genes chrX_4_5510001 chrX_5510001 RAL-911 1875 chrX 5524821 5524851 chrX 5528703 5528734 412 7 3883 5.5 1.0 3.2 1.7 3913 chrX 5524821 intergenic snoRNA:Psi28S-3342 - chrX 5526778 intergenic not near genes chrX 5528734 intergenic Vsx2 - chrX_7_5525001 chrX_5525001 RAL-911 1876 chrX 5609217 5609221 chrX 5609470 5609473 4 253 7.5 4.0 5.8 0.6 256 chrX 5609217 intron Vsx1 + chrX 5609345 intron Vsx1 + chrX 5609473 intron Vsx1 + chrX_4_5605001 chrX_5605001 RAL-911 1877 chrX 5883802 5883835 chrX 5884063 5884094 pogo 8 258 0.5 5.5 3.0 2.0 292 chrX 5883802 intron CR45668 - chrX 5883948 intron CR45668 - chrX 5884094 intron CR45668 - chrX_8_5880001 chrX_5880001 RAL-911 1878 chrX 6119605 6119654 chrX 6119779 6119828 8 171 2.5 3.5 3.0 2.0 223 chrX 6119605 intron Ca-alpha1T - chrX 6119716 intron Ca-alpha1T - chrX 6119828 intron Ca-alpha1T - chrX_8_6115001 chrX_6115001 RAL-911 1879 chrX 6312180 6312213 chrX 6312280 6312316 6 100 4.0 4.0 4.0 1.2 136 chrX 6312180 intron CG15894 + chrX 6312248 intron CG15894 + chrX 6312316 intron CG15894 + chrX_6_6310001 chrX_6310001 RAL-911 1880 chrX 6320035 6320079 chrX 6320163 6320205 6 122 1.0 1.5 1.2 2.7 170 chrX 6320035 intron CG15894 + chrX 6320120 intron CG15894 + chrX 6320205 intron CG15894 + chrX_6_6320001 chrX_6320001 RAL-911 1881 chrX 6897689 6897709 chrX 6897798 6897832 5 116 0.5 2.5 1.5 2.0 143 chrX 6897689 intergenic not near genes chrX 6897760 intergenic not near genes chrX 6897832 intergenic not near genes chrX_5_6895001 chrX_6895001 RAL-911 1882 chrX 6988513 6988525 chrX 6988618 6988630 4 105 3.0 1.5 2.2 1.2 117 chrX 6988513 intron ogre - chrX 6988572 intron ogre - chrX 6988630 intron ogre - chrX_4_6985001 chrX_6985001 RAL-911 1883 chrX 7125235 7125269 chrX 7134414 7134448 roo 7 9177 0.0 6.0 3.0 1.8 9213 chrX 7125235 intergenic not near genes chrX 7129842 intergenic not near genes chrX 7134448 intergenic not near genes chrX_7_7125001 chrX_7125001 RAL-911 1884 chrX 7381145 7381191 chrX 7381248 7381294 5 101 0.0 3.0 1.5 2.0 149 chrX 7381145 intron,intron CR44357 -,CG1677 - chrX 7381220 intron,intron CR44357 -,CG1677 - chrX 7381294 intron,intron CR44357 -,CG1677 - chrX_5_7380001 chrX_7380001 RAL-911 1885 chrX 7737147 7737172 chrX 7737249 7737264 9 96 3.5 1.0 2.2 2.8 117 chrX 7737147 5` UTR Tom40 + chrX 7737206 intron Tom40 + chrX 7737264 intron Tom40 + chrX_9_7735001 chrX_7735001 RAL-911 1886 chrX 7832416 7832464 chrX 7832524 7832573 11 105 2.0 2.0 2.0 3.7 157 chrX 7832416 intron CG1402 + chrX 7832494 intron CG1402 + chrX 7832573 intron CG1402 + chrX_11_7830001 chrX_7830001 RAL-911 1887 chrX 7960857 7960896 chrX 7960966 7961005 19 108 1.0 2.5 1.8 6.8 148 chrX 7960857 intron,5` UTR sws -,CR45620 + chrX 7960931 intron sws - chrX 7961005 intron sws - chrX_19_7960001 chrX_7960001 RAL-911 1888 chrX 8031411 8031454 chrX 8035740 8035777 Juan 12 4328 1.5 5.0 3.2 2.9 4366 chrX 8031411 intergenic not near genes chrX 8033594 intergenic not near genes chrX 8035777 3` UTR CG2233 - chrX_12_8030001 chrX_8030001 RAL-911 1889 chrX 8066562 8066597 chrX 8066655 8066706 8 107 0.5 0.5 0.5 5.3 144 chrX 8066562 intron mys + chrX 8066634 intron mys + chrX 8066706 intron mys + chrX_8_8065001 chrX_8065001 RAL-911 1890 chrX 8085573 8085603 chrX 8085679 8085709 5 106 4.0 7.5 5.8 0.7 136 chrX 8085573 intron,5` UTR CG2256 -,CR45535 + chrX 8085641 intron,5` UTR CG2256 -,CR45535 + chrX 8085709 intron,5` UTR CG2256 -,CR45535 + chrX_5_8085001 chrX_8085001 RAL-911 1891 chrX 8092292 8092321 chrX 8092387 8092426 14 103 1.0 3.5 2.2 4.4 134 chrX 8092292 intron Ubc-E2H - chrX 8092359 intron Ubc-E2H - chrX 8092426 intron Ubc-E2H - chrX_14_8090001 chrX_8090001 RAL-911 1892 chrX 8500919 8500938 chrX 8501103 8501122 8 184 6.5 0.0 3.2 1.9 203 chrX 8500919 intron CG33181 + chrX 8501020 intron CG33181 + chrX 8501122 intron CG33181 + chrX_8_8500001 chrX_8500001 RAL-911 1893 chrX 8743946 8743963 chrX 8744056 8744089 6 121 2.0 0.5 1.2 2.7 143 chrX 8743946 intergenic not near genes chrX 8744018 intergenic not near genes chrX 8744089 intergenic not near genes chrX_6_8740001 chrX_8740001 RAL-911 1894 chrX 8860789 8860799 chrX 8860893 8860903 4 104 0.0 6.0 3.0 1.0 114 chrX 8860789 intron CG12075 + chrX 8860846 intron CG12075 + chrX 8860903 intron CG12075 + chrX_4_8860001 chrX_8860001 RAL-911 1895 chrX 8894990 8895002 chrX 8895093 8895108 5 105 2.0 3.0 2.5 1.4 118 chrX 8894990 intron Moe - chrX 8895049 intron Moe - chrX 8895108 intron Moe - chrX_5_8895001 chrX_8895001 RAL-911 1896 chrX 8948744 8948792 chrX 8956274 8956321 roo 9 7527 2.5 2.5 2.5 2.6 7577 chrX 8948744 intron rdgA + chrX 8952532 intron rdgA + chrX 8956321 intron rdgA + chrX_9_8950001 chrX_8950001 RAL-911 1897 chrX 9218060 9218084 chrX 9218171 9218195 4 111 4.0 0.0 2.0 1.3 135 chrX 9218060 3` UTR t - chrX 9218128 3` UTR t - chrX 9218195 3` UTR t - chrX_4_9215001 chrX_9215001 RAL-911 1898 chrX 9272999 9273045 chrX 9273099 9273146 14 101 2.5 5.0 3.8 2.9 147 chrX 9272999 intergenic Cfp1 -,CG16892 + chrX 9273072 intergenic Cfp1 -,CG16892 + chrX 9273146 intergenic Cfp1 -,CG16892 + chrX_14_9270001 chrX_9270001 RAL-911 1899 chrX 9476034 9476081 chrX 9476279 9476325 7 243 0.5 1.0 0.8 3.9 291 chrX 9476034 intron mgl - chrX 9476180 intron mgl - chrX 9476325 intron mgl - chrX_7_9475001 chrX_9475001 RAL-911 1900 chrX 9508136 9508156 chrX 9509661 9509694 jockey 5 1534 3.5 2.5 3.0 1.2 1558 chrX 9508136 intron CG32700 - chrX 9508915 intron CG32700 - chrX 9509694 intron CG32700 - chrX_5_9505001 chrX_9505001 RAL-911 1901 chrX 9543377 9543423 chrX 9543476 9543514 14 94 5.0 3.5 4.2 2.7 137 chrX 9543377 intron CG32700 - chrX 9543446 intron CG32700 - chrX 9543514 intron CG32700 - chrX_14_9540001 chrX_9540001 RAL-911 1902 chrX 10068818 10068835 chrX 10068928 10068928 4 113 2.0 2.0 2.0 1.3 110 chrX 10068818 intron CG15312 - chrX 10068873 intron CG15312 - chrX 10068928 intron CG15312 - chrX_4_10065001 chrX_10065001 RAL-911 1903 chrX 10138201 10138236 chrX 10145724 10145760 412 6 7524 2.0 0.0 1.0 3.0 7559 chrX 10138201 intron,intron RhoU +,CR44894 - chrX 10141980 intron,intron RhoU +,CR44894 - chrX 10145760 intron,intron RhoU +,CR44894 - chrX_6_10140001 chrX_10140001 RAL-911 1904 chrX 10223657 10223708 chrX 10223796 10223806 8 124 4.0 0.5 2.2 2.5 149 chrX 10223657 intron CG34408 + chrX 10223732 intron CG34408 + chrX 10223806 intron CG34408 + chrX_8_10220001 chrX_10220001 RAL-911 1905 chrX 10267300 10267330 chrX 10276470 10276500 roo 6 9169 0.5 5.0 2.8 1.6 9200 chrX 10267300 3` UTR alpha-Man-I - chrX 10271900 intron alpha-Man-I - chrX 10276500 3` UTR alpha-Man-I - chrX_6_10270001 chrX_10270001 RAL-911 1906 chrX 10348779 10348814 chrX 10356364 10356399 springer 4 7585 5.0 4.0 4.5 0.7 7620 chrX 10348779 intergenic snoRNA:U3:9B + chrX 10352589 intergenic not near genes chrX 10356399 intergenic l(1)G0289 - chrX_4_10350001 chrX_10350001 RAL-911 1907 chrX 10428858 10428891 chrX 10428959 10428980 4 102 0.5 4.0 2.2 1.2 122 chrX 10428858 intron CG32683 - chrX 10428919 intron CG32683 - chrX 10428980 intron CG32683 - chrX_4_10425001 chrX_10425001 RAL-911 1908 chrX 10550315 10550364 chrX 10550413 10550460 20 98 4.0 3.5 3.8 4.2 145 chrX 10550315 intron spri - chrX 10550388 intron spri - chrX 10550460 intron spri - chrX_20_10550001 chrX_10550001 RAL-911 1909 chrX 10651626 10651629 chrX 10651751 10651765 5 134 0.0 7.5 3.8 1.0 139 chrX 10651626 intron X11Lbeta + chrX 10651696 intron X11Lbeta + chrX 10651765 intron X11Lbeta + chrX_5_10650001 chrX_10650001 RAL-911 1910 chrX 10686030 10686077 chrX 10691187 10691229 roo 10 5155 2.5 3.5 3.0 2.5 5199 chrX 10686030 intron X11Lbeta + chrX 10688630 intron X11Lbeta + chrX 10691229 intron X11Lbeta + chrX_10_10685001 chrX_10685001 RAL-911 1911 chrX 11095979 11096024 chrX 11103101 11103146 HMS-Beagle 13 7121 6.5 3.5 5.0 2.2 7167 chrX 11095979 intergenic not near genes chrX 11099562 intergenic not near genes chrX 11103146 intron CG42249 + chrX_13_11095001 chrX_11095001 RAL-911 1912 chrX 11109417 11109417 chrX 12946233 12946234 12 1836817 9.0 16.0 12.5 0.9 1836817 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946234 3` UTR fne + chrX_12_12025001 chrX_12025001 RAL-911 1913 chrX 11633405 11633442 chrX 11640478 11640516 297 4 7074 2.5 4.5 3.5 0.9 7111 chrX 11633405 intron Ptp10D + chrX 11636960 intron Ptp10D + chrX 11640516 intron Ptp10D + chrX_4_11635001 chrX_11635001 RAL-911 1914 chrX 11798996 11799035 chrX 11799102 11799141 8 102 2.0 2.5 2.2 2.5 145 chrX 11798996 intron CkIIbeta + chrX 11799068 intron CkIIbeta + chrX 11799141 intron CkIIbeta + chrX_8_11795001 chrX_11795001 RAL-911 1915 chrX 11804662 11804688 chrX 11804778 11804812 4 120 3.0 2.0 2.5 1.1 150 chrX 11804662 intron Hsc70-3 - chrX 11804737 intron Hsc70-3 - chrX 11804812 intron Hsc70-3 - chrX_4_11800001 chrX_11800001 RAL-911 1916 chrX 11822197 11822217 chrX 11822356 11822376 8 158 2.0 6.0 4.0 1.6 179 chrX 11822197 intron rudhira + chrX 11822286 intron rudhira + chrX 11822376 intron rudhira + chrX_8_11820001 chrX_11820001 RAL-911 1917 chrX 11836172 11836222 chrX 11836273 11836323 19 99 7.0 2.0 4.5 3.5 151 chrX 11836172 3` UTR rudhira + chrX 11836248 3` UTR rudhira + chrX 11836323 3` UTR rudhira + chrX_19_11835001 chrX_11835001 RAL-911 1918 chrX 11922351 11922382 chrX 11922504 11922535 4 153 1.0 5.0 3.0 1.0 184 chrX 11922351 exon Sclp - chrX 11922443 intron Sclp - chrX 11922535 intron Sclp - chrX_4_11920001 chrX_11920001 RAL-911 1919 chrX 12168133 12168163 chrX 12173571 12173616 I-element 5 5453 2.5 0.5 1.5 2.0 5483 chrX 12168133 intron Ten-a + chrX 12170874 intron Ten-a + chrX 12173616 intron Ten-a + chrX_5_12170001 chrX_12170001 RAL-911 1920 chrX 12356857 12356878 chrX 12356989 12357009 4 132 0.0 2.5 1.2 1.8 152 chrX 12356857 intergenic not near genes chrX 12356933 intergenic not near genes chrX 12357009 intergenic not near genes chrX_4_12355001 chrX_12355001 RAL-911 1921 chrX 12381902 12381904 chrX 12385777 12385781 flea 5 3891 1.0 4.5 2.8 1.3 3879 chrX 12381902 intergenic not near genes chrX 12383842 intergenic not near genes chrX 12385781 intergenic not near genes chrX_5_12380001 chrX_12380001 RAL-911 1922 chrX 12430937 12430955 chrX 12431035 12431053 4 98 3.0 2.5 2.8 1.1 116 chrX 12430937 intergenic not near genes chrX 12430995 intergenic not near genes chrX 12431053 intergenic not near genes chrX_4_12430001 chrX_12430001 RAL-911 1923 chrX 12442066 12442091 chrX 12442167 12442192 6 101 6.5 0.0 3.2 1.4 126 chrX 12442066 intron Pkcdelta + chrX 12442129 intron Pkcdelta + chrX 12442192 intron Pkcdelta + chrX_6_12440001 chrX_12440001 RAL-911 1924 chrX 12492980 12492988 chrX 13057293 13057301 5 564313 2.5 11.5 7.0 0.6 564321 chrX 12492980 3` UTR Lsp1alpha + chrX 12775140 3` UTR CG32647 - chrX 13057301 intron rad + chrX_5_12775001 chrX_12775001 RAL-911 1925 chrX 12694182 12694203 chrX 12694271 12694304 4 94 7.0 1.5 4.2 0.8 122 chrX 12694182 intron Smr - chrX 12694243 intron Smr - chrX 12694304 intron Smr - chrX_4_12690001 chrX_12690001 RAL-911 1926 chrX 12726044 12726083 chrX 12726752 12726790 4 700 3.5 3.0 3.2 1.0 746 chrX 12726044 intron,intron Smr -,CR43963 - chrX 12726417 intron,intron Smr -,CR43963 - chrX 12726790 intron,intron Smr -,CR43963 - chrX_4_12725001 chrX_12725001 RAL-911 1927 chrX 12785405 12785459 chrX 12785502 12785551 8 96 2.5 6.0 4.2 1.5 146 chrX 12785405 intergenic Pde9 -,CG32647 - chrX 12785478 intergenic Pde9 - chrX 12785551 intergenic Pde9 - chrX_8_12785001 chrX_12785001 RAL-911 1928 chrX 12930579 12930601 chrX 12937715 12937737 HMS-Beagle 11 7136 2.5 4.5 3.5 2.4 7158 chrX 12930579 intron fne + chrX 12934158 intron fne + chrX 12937737 intron fne + chrX_11_12930001 chrX_12930001 RAL-911 1929 chrX 7305169 7305169 chrX 12946233 12946233 6 5641064 5.0 16.0 10.5 0.5 5641064 chrX 7305169 intron,intron CR44357 -,CG1677 - chrX 10125701 intron,intron RhoU +,CR44894 - chrX 12946233 3` UTR fne + chrX_6_10125001 chrX_10125001 RAL-911 1930 chrX 11109417 11109417 chrX 12946233 12946233 4 1836816 9.0 16.0 12.5 0.3 1836816 chrX 11109417 intron Hsp60 + chrX 12027825 exon Usp7 - chrX 12946233 3` UTR fne + chrX_4_12025001 chrX_12025001 RAL-911 1931 chrX 12572221 12572221 chrX 12946233 12946233 6 374012 10.0 16.0 13.0 0.4 374012 chrX 12572221 3` UTR CG11138 - chrX 12759227 intron ade5 - chrX 12946233 3` UTR fne + chrX_6_12755001 chrX_12755001 RAL-911 1932 chrX 3120059 3120059 chrX 12946234 12946234 Juan 6 9826175 0.5 16.0 8.2 0.7 9826175 chrX 3120059 intron kirre + chrX 8033146 intergenic not near genes chrX 12946234 3` UTR fne + chrX_6_8030001 chrX_8030001 RAL-911 1933 chrX 6854020 6854021 chrX 12946234 12946234 4 6092214 10.0 16.0 13.0 0.3 6092214 chrX 6854020 intron CG14434 - chrX 9900127 intergenic not near genes chrX 12946234 3` UTR fne + chrX_4_9900001 chrX_9900001 RAL-911 1934 chrX 7305169 7305169 chrX 12946234 12946234 8 5641065 5.0 16.0 10.5 0.7 5641065 chrX 7305169 intron,intron CR44357 -,CG1677 - chrX 10125702 intron,intron RhoU +,CR44894 - chrX 12946234 3` UTR fne + chrX_8_10125001 chrX_10125001 RAL-911 1935 chrX 11109417 11109417 chrX 12946234 12946234 4 1836817 9.0 16.0 12.5 0.3 1836817 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946234 3` UTR fne + chrX_4_12025001 chrX_12025001 RAL-911 1936 chrX 11932624 11932625 chrX 12946234 12946234 4 1013610 4.0 16.0 10.0 0.4 1013610 chrX 11932624 3` UTR cac - chrX 12439429 intron Pkcdelta + chrX 12946234 3` UTR fne + chrX_4_12435001 chrX_12435001 RAL-911 1937 chrX 12946234 12946234 chrX 17107687 17107687 15 4161453 15.0 7.5 11.2 1.2 4161453 chrX 12946234 3` UTR fne + chrX 15026960 intron,intron hiw -,be + chrX 17107687 5` UTR CG5004 + chrX_15_15025001 chrX_15025001 RAL-911 1938 chrX 3120060 3120060 chrX 12946235 12946235 Juan 7 9826175 0.0 16.0 8.0 0.8 9826175 chrX 3120060 intron kirre + chrX 8033148 intergenic not near genes chrX 12946235 3` UTR fne + chrX_7_8030001 chrX_8030001 RAL-911 1939 chrX 12946235 12946235 chrX 14891242 14891242 4 1945007 15.0 4.0 9.5 0.4 1945007 chrX 12946235 3` UTR fne + chrX 13918738 intron mamo - chrX 14891242 intron,intron Flo2 +,CG9514 - chrX_4_13915001 chrX_13915001 RAL-911 1940 chrX 12946235 12946235 chrX 18572526 18572526 6 5626291 15.0 10.0 12.5 0.4 5626291 chrX 12946235 3` UTR fne + chrX 15759380 intron Graf - chrX 18572526 intergenic not near genes chrX_6_15755001 chrX_15755001 RAL-911 1941 chrX 12946235 12946235 chrX 19355850 19355850 10 6409615 15.0 4.0 9.5 1.0 6409615 chrX 12946235 3` UTR fne + chrX 16151042 intergenic not near genes chrX 19355850 intron kek5 + chrX_10_16150001 chrX_16150001 RAL-911 1942 chrX 12987868 12987918 chrX 12987975 12988019 11 106 2.0 1.0 1.5 4.4 151 chrX 12987868 intergenic not near genes chrX 12987944 intergenic not near genes chrX 12988019 intergenic not near genes chrX_11_12985001 chrX_12985001 RAL-911 1943 chrX 13099108 13099138 chrX 13099221 13099251 4 113 0.0 5.0 2.5 1.1 143 chrX 13099108 intron CG43313 - chrX 13099180 intron CG43313 - chrX 13099251 intron CG43313 - chrX_4_13095001 chrX_13095001 RAL-911 1944 chrX 13146581 13146625 chrX 13146689 13146733 15 108 2.0 2.0 2.0 5.0 152 chrX 13146581 intron CG32645 + chrX 13146657 intron CG32645 + chrX 13146733 intron CG32645 + chrX_15_13145001 chrX_13145001 RAL-911 1945 chrX 13172339 13172364 chrX 13172435 13172458 6 94 2.0 1.5 1.8 2.1 119 chrX 13172339 exon CG34411 - chrX 13172398 intron CG34411 - chrX 13172458 intron CG34411 - chrX_6_13170001 chrX_13170001 RAL-911 1946 chrX 13227332 13227370 chrX 13227431 13227469 11 99 3.5 4.5 4.0 2.2 137 chrX 13227332 intron mew - chrX 13227400 intron mew - chrX 13227469 intron mew - chrX_11_13225001 chrX_13225001 RAL-911 1947 chrX 13319480 13319520 chrX 13319588 13319633 6 112 3.0 1.0 2.0 2.0 153 chrX 13319480 intron IP3K2 + chrX 13319556 intron IP3K2 + chrX 13319633 intron IP3K2 + chrX_6_13315001 chrX_13315001 RAL-911 1948 chrX 13401465 13401516 chrX 13401837 13401877 jockey 7 370 2.0 4.5 3.2 1.7 412 chrX 13401465 intergenic CG1673 +,CG12725 - chrX 13401671 intergenic CG12725 -,CG1673 + chrX 13401877 3` UTR CG12725 - chrX_7_13400001 chrX_13400001 RAL-911 1949 chrX 13429476 13429481 chrX 13430639 13430650 jockey 4 1168 0.0 8.0 4.0 0.8 1174 chrX 13429476 intergenic not near genes chrX 13430063 intergenic not near genes chrX 13430650 intergenic not near genes chrX_4_13430001 chrX_13430001 RAL-911 1950 chrX 13463634 13463678 chrX 13469231 13469249 mdg3 8 5590 2.5 3.5 3.0 2.0 5615 chrX 13463634 intron Neto + chrX 13466442 intron Neto + chrX 13469249 intron Neto + chrX_8_13465001 chrX_13465001 RAL-911 1951 chrX 13915425 13915457 chrX 13915577 13915609 4 152 2.0 1.0 1.5 1.6 184 chrX 13915425 intron mamo - chrX 13915517 intron mamo - chrX 13915609 intron mamo - chrX_4_13915001 chrX_13915001 RAL-911 1952 chrX 13937964 13938008 chrX 13941255 13941299 I-element 7 3291 1.5 0.5 1.0 3.5 3335 chrX 13937964 intron mamo - chrX 13939632 intron mamo - chrX 13941299 intron mamo - chrX_7_13935001 chrX_13935001 RAL-911 1953 chrX 13943272 13943292 chrX 13943383 13943383 7 107 0.0 3.0 1.5 2.8 111 chrX 13943272 intron mamo - chrX 13943328 intron mamo - chrX 13943383 intron mamo - chrX_7_13940001 chrX_13940001 RAL-911 1954 chrX 13057303 13057304 chrX 13966949 13966951 5 909646 10.5 8.0 9.2 0.5 909648 chrX 13057303 intron rad + chrX 13512127 intron Neto + chrX 13966951 intron mamo - chrX_5_13510001 chrX_13510001 RAL-911 1955 chrX 13975878 13975901 chrX 13975958 13975998 4 92 0.0 4.5 2.2 1.2 120 chrX 13975878 intron mamo - chrX 13975938 intron mamo - chrX 13975998 intron mamo - chrX_4_13975001 chrX_13975001 RAL-911 1956 chrX 14157575 14157598 chrX 14163252 14163275 297 5 5675 6.0 4.5 5.2 0.8 5700 chrX 14157575 intergenic not near genes chrX 14160425 intergenic not near genes chrX 14163275 intergenic not near genes chrX_5_14160001 chrX_14160001 RAL-911 1957 chrX 14167403 14167436 chrX 14167517 14167548 13 115 2.0 5.5 3.8 2.7 145 chrX 14167403 intergenic not near genes chrX 14167476 intergenic not near genes chrX 14167548 intergenic not near genes chrX_13_14165001 chrX_14165001 RAL-911 1958 chrX 14209452 14209489 chrX 14209563 14209596 4 110 3.5 4.0 3.8 0.8 144 chrX 14209452 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209524 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209596 intron,intron l(1)G0007 +,l(1)G0469 - chrX_4_14205001 chrX_14205001 RAL-911 1959 chrX 14216783 14216801 chrX 14216888 14216906 4 105 3.0 2.0 2.5 1.1 123 chrX 14216783 intron l(1)G0007 + chrX 14216844 intron l(1)G0007 + chrX 14216906 intron l(1)G0007 + chrX_4_14215001 chrX_14215001 RAL-911 1960 chrX 14416290 14416296 chrX 14421078 14421079 F-element 5 4787 6.0 3.5 4.8 0.9 4789 chrX 14416290 intron dpr8 + chrX 14418684 intron dpr8 + chrX 14421079 intron dpr8 + chrX_5_14415001 chrX_14415001 RAL-911 1961 chrX 14416300 14416340 chrX 14421073 14421105 F-element 5 4777 2.0 3.0 2.5 1.4 4805 chrX 14416300 intron dpr8 + chrX 14418702 intron dpr8 + chrX 14421105 intron dpr8 + chrX_5_14415001 chrX_14415001 RAL-911 1962 chrX 14500251 14500293 chrX 14500349 14500391 13 98 3.5 3.0 3.2 3.1 140 chrX 14500251 intergenic not near genes chrX 14500321 intergenic not near genes chrX 14500391 intergenic not near genes chrX_13_14500001 chrX_14500001 RAL-911 1963 chrX 14560253 14560301 chrX 14560356 14560405 5 104 0.0 2.5 1.2 2.3 152 chrX 14560253 intergenic not near genes chrX 14560329 intergenic not near genes chrX 14560405 intergenic not near genes chrX_5_14560001 chrX_14560001 RAL-911 1964 chrX 14570061 14570104 chrX 14570158 14570205 5 101 3.5 0.5 2.0 1.7 144 chrX 14570061 intergenic not near genes chrX 14570133 intergenic not near genes chrX 14570205 intergenic not near genes chrX_5_14570001 chrX_14570001 RAL-911 1965 chrX 14593781 14593819 chrX 14593882 14593921 9 102 4.0 2.5 3.2 2.1 140 chrX 14593781 intron CG9413 - chrX 14593851 intron CG9413 - chrX 14593921 intron CG9413 - chrX_9_14590001 chrX_14590001 RAL-911 1966 chrX 14636450 14636491 chrX 14641910 14641952 I-element 8 5457 1.0 1.5 1.2 3.6 5502 chrX 14636450 intron NetA - chrX 14639201 intron NetA - chrX 14641952 intron NetA - chrX_8_14635001 chrX_14635001 RAL-911 1967 chrX 14762170 14762193 chrX 14762269 14762292 4 97 2.5 4.0 3.2 1.0 122 chrX 14762170 intron CG15890 - chrX 14762231 intron CG15890 - chrX 14762292 intron CG15890 - chrX_4_14760001 chrX_14760001 RAL-911 1968 chrX 14774964 14775005 chrX 14775061 14775102 13 97 3.0 2.5 2.8 3.4 138 chrX 14774964 intergenic CG5334 + chrX 14775033 intergenic CG5334 + chrX 14775102 intergenic CG5334 + chrX_13_14775001 chrX_14775001 RAL-911 1969 chrX 14778009 14778046 chrX 14782826 14782863 Doc 8 4817 3.0 3.0 3.0 2.0 4854 chrX 14778009 intergenic CG5347 + chrX 14780436 intergenic not near genes chrX 14782863 intergenic Ag5r2 - chrX_8_14780001 chrX_14780001 RAL-911 1970 chrX 14799691 14799728 chrX 14799792 14799834 5 110 0.5 3.0 1.8 1.8 143 chrX 14799691 intron rut - chrX 14799762 intron rut - chrX 14799834 intron rut - chrX_5_14795001 chrX_14795001 RAL-911 1971 chrX 14806751 14806780 chrX 14806848 14806888 7 106 2.0 0.0 1.0 3.5 137 chrX 14806751 intron rut - chrX 14806820 intron rut - chrX 14806888 intron rut - chrX_7_14805001 chrX_14805001 RAL-911 1972 chrX 14809559 14809594 chrX 14809666 14809694 6 105 5.5 3.5 4.5 1.1 135 chrX 14809559 intron rut - chrX 14809626 intron rut - chrX 14809694 intron rut - chrX_6_14805001 chrX_14805001 RAL-911 1973 chrX 14936851 14936872 chrX 14946128 14946149 roo 4 9276 6.0 2.5 4.2 0.8 9298 chrX 14936851 intron pdgy - chrX 14941500 intron pdgy - chrX 14946149 intron pdgy - chrX_4_14940001 chrX_14940001 RAL-911 1974 chrX 14936873 14936889 chrX 14946124 14946166 roo 4 9270 4.0 2.5 3.2 1.0 9293 chrX 14936873 intron pdgy - chrX 14941520 intron pdgy - chrX 14946166 intron pdgy - chrX_4_14940001 chrX_14940001 RAL-911 1975 chrX 15291983 15292027 chrX 15292095 15292143 6 115 4.0 5.0 4.5 1.1 160 chrX 15291983 intergenic not near genes chrX 15292063 intergenic not near genes chrX 15292143 intergenic not near genes chrX_6_15290001 chrX_15290001 RAL-911 1976 chrX 15421905 15421932 chrX 15423436 15423450 pogo 5 1522 1.5 4.0 2.8 1.3 1545 chrX 15421905 intron Cngl - chrX 15422678 intron Cngl - chrX 15423450 intron Cngl - chrX_5_15420001 chrX_15420001 RAL-911 1977 chrX 15435690 15435698 chrX 15436142 15436151 rover 5 451 0.0 4.0 2.0 1.7 461 chrX 15435690 intron Cngl - chrX 15435920 intron Cngl - chrX 15436151 intron Cngl - chrX_5_15435001 chrX_15435001 RAL-911 1978 chrX 15671190 15671201 chrX 15671297 15671303 4 106 2.5 0.0 1.2 1.8 113 chrX 15671190 intergenic CG15646 - chrX 15671246 intergenic CG15646 - chrX 15671303 intergenic CG15646 - chrX_4_15670001 chrX_15670001 RAL-911 1979 chrX 15818768 15818806 chrX 15818850 15818883 6 89 3.0 2.0 2.5 1.7 115 chrX 15818768 intron sd + chrX 15818826 intron sd + chrX 15818883 intron sd + chrX_6_15815001 chrX_15815001 RAL-911 1980 chrX 15926911 15926960 chrX 15927010 15927059 11 99 6.0 3.5 4.8 1.9 148 chrX 15926911 exon,3` UTR Lcch3 +,CR45000 - chrX 15926985 intron,intron Lcch3 +,CR45000 - chrX 15927059 intron,3` UTR Lcch3 +,CR45000 - chrX_11_15925001 chrX_15925001 RAL-911 1981 chrX 16172882 16172918 chrX 16173010 16173046 7 122 3.0 1.5 2.2 2.2 164 chrX 16172882 intergenic not near genes chrX 16172964 intergenic not near genes chrX 16173046 intergenic not near genes chrX_7_16170001 chrX_16170001 RAL-911 1982 chrX 16222769 16222803 chrX 16231139 16231173 roo 7 8369 1.5 5.0 3.2 1.7 8404 chrX 16222769 intergenic not near genes chrX 16226971 intergenic not near genes chrX 16231173 intergenic not near genes chrX_7_16225001 chrX_16225001 RAL-911 1983 chrX 16295509 16295533 chrX 16295613 16295622 6 101 6.0 0.0 3.0 1.5 113 chrX 16295509 intron CG9911 - chrX 16295566 intron CG9911 - chrX 16295622 intron CG9911 - chrX_6_16295001 chrX_16295001 RAL-911 1984 chrX 16340652 16340697 chrX 16349827 16349849 roo 5 9169 0.5 4.0 2.2 1.6 9197 chrX 16340652 intergenic Dsp1 + chrX 16345250 intergenic not near genes chrX 16349849 intergenic sl + chrX_5_16345001 chrX_16345001 RAL-911 1985 chrX 16437793 16437833 chrX 16437899 16437939 7 106 4.0 1.0 2.5 2.0 146 chrX 16437793 3` UTR,3` UTR hang +,CG9947 - chrX 16437866 3` UTR,3` UTR hang +,CG9947 - chrX 16437939 3` UTR,3` UTR hang +,CG9947 - chrX_7_16435001 chrX_16435001 RAL-911 1986 chrX 16492634 16492671 chrX 16498231 16498268 mdg3 10 5595 3.0 1.5 2.2 3.1 5634 chrX 16492634 intron para - chrX 16495451 intron para - chrX 16498268 intron para - chrX_10_16495001 chrX_16495001 RAL-911 1987 chrX 16677312 16677334 chrX 16677467 16677489 9 155 0.0 1.5 0.8 5.0 177 chrX 16677312 intergenic not near genes chrX 16677400 intergenic not near genes chrX 16677489 intergenic not near genes chrX_9_16675001 chrX_16675001 RAL-911 1988 chrX 16764717 16764735 chrX 16764814 16764820 6 93 5.5 1.0 3.2 1.4 103 chrX 16764717 intron if - chrX 16764768 intron if - chrX 16764820 intron if - chrX_6_16760001 chrX_16760001 RAL-911 1989 chrX 16785261 16785306 chrX 16785385 16785429 8 124 1.5 2.5 2.0 2.7 168 chrX 16785261 3` UTR CG9609 - chrX 16785345 3` UTR CG9609 - chrX 16785429 3` UTR CG9609 - chrX_8_16785001 chrX_16785001 RAL-911 1990 chrX 16833187 16833221 chrX 16833292 16833321 10 104 3.0 0.5 1.8 3.6 134 chrX 16833187 intron CG13004 - chrX 16833254 intron CG13004 - chrX 16833321 intron CG13004 - chrX_10_16830001 chrX_16830001 RAL-911 1991 chrX 1053117 1053123 chrX 16983076 16983076 6 15929955 3.5 11.5 7.5 0.7 15929959 chrX 1053117 intron CR44779 + chrX 9018096 intron,intron rdgA +,CR43836 - chrX 16983076 intron CG45002 - chrX_6_9015001 chrX_9015001 RAL-911 1992 chrX 17057934 17057965 chrX 17058195 17058226 pogo 6 261 2.0 4.5 3.2 1.4 292 chrX 17057934 intron CG45002 - chrX 17058080 intron CG45002 - chrX 17058226 intron CG45002 - chrX_6_17055001 chrX_17055001 RAL-911 1993 chrX 17110302 17110332 chrX 17110432 17110474 11 141 0.0 2.0 1.0 5.5 172 chrX 17110302 intron CG5004 + chrX 17110388 intron CG5004 + chrX 17110474 intron CG5004 + chrX_11_17110001 chrX_17110001 RAL-911 1994 chrX 17113548 17113568 chrX 17113650 17113670 6 102 0.0 4.5 2.2 1.9 122 chrX 17113548 intron CG5004 + chrX 17113609 intron CG5004 + chrX 17113670 intron CG5004 + chrX_6_17110001 chrX_17110001 RAL-911 1995 chrX 17148574 17148592 chrX 17148673 17148690 7 99 1.5 3.0 2.2 2.2 116 chrX 17148574 intergenic RpS5a -,CG5010 + chrX 17148632 intergenic RpS5a -,CG5010 + chrX 17148690 intergenic CG5010 +,RpS5a - chrX_7_17145001 chrX_17145001 RAL-911 1996 chrX 17148593 17148621 chrX 17148671 17148720 8 96 0.0 3.0 1.5 3.2 127 chrX 17148593 intergenic RpS5a -,CG5010 + chrX 17148656 intergenic CG5010 +,RpS5a - chrX 17148720 intergenic CG5010 +,RpS5a - chrX_8_17145001 chrX_17145001 RAL-911 1997 chrX 17205830 17205857 chrX 17205939 17205967 12 109 3.5 2.5 3.0 3.0 137 chrX 17205830 intergenic not near genes chrX 17205898 intergenic not near genes chrX 17205967 intergenic CG32564 + chrX_12_17205001 chrX_17205001 RAL-911 1998 chrX 17316350 17316383 chrX 17316453 17316487 7 104 5.5 0.0 2.8 1.8 137 chrX 17316350 intron B-H2 + chrX 17316418 intron B-H2 + chrX 17316487 intron B-H2 + chrX_7_17315001 chrX_17315001 RAL-911 1999 chrX 17352578 17352617 chrX 17352692 17352740 5 116 0.0 2.5 1.2 2.3 162 chrX 17352578 intergenic not near genes chrX 17352659 intergenic not near genes chrX 17352740 intergenic not near genes chrX_5_17350001 chrX_17350001 RAL-911 2000 chrX 17482242 17482267 chrX 17482340 17482365 6 97 4.0 4.0 4.0 1.2 123 chrX 17482242 intron CG43658 - chrX 17482304 intron CG43658 - chrX 17482365 intron CG43658 - chrX_6_17480001 chrX_17480001 RAL-911 2001 chrX 17502334 17502368 chrX 17502433 17502438 8 94 4.5 2.5 3.5 1.8 104 chrX 17502334 intron CG43658 - chrX 17502386 intron CG43658 - chrX 17502438 intron CG43658 - chrX_8_17500001 chrX_17500001 RAL-911 2002 chrX 17546948 17546995 chrX 17547101 17547132 7 151 1.0 1.5 1.2 3.2 184 chrX 17546948 intron CG43658 - chrX 17547040 intron CG43658 - chrX 17547132 intron CG43658 - chrX_7_17545001 chrX_17545001 RAL-911 2003 chrX 17680905 17680924 chrX 17680968 17681005 4 83 1.5 1.0 1.2 1.8 100 chrX 17680905 intron chas - chrX 17680955 intron chas - chrX 17681005 intron chas - chrX_4_17680001 chrX_17680001 RAL-911 2004 chrX 17685452 17685470 chrX 17685555 17685573 4 103 0.0 4.5 2.2 1.2 121 chrX 17685452 intron chas - chrX 17685512 intron chas - chrX 17685573 intron chas - chrX_4_17685001 chrX_17685001 RAL-911 2005 chrX 17741360 17741371 chrX 17741526 17741537 4 166 0.0 6.0 3.0 1.0 177 chrX 17741360 intron CG42684 + chrX 17741448 intron CG42684 + chrX 17741537 intron CG42684 + chrX_4_17740001 chrX_17740001 RAL-911 2006 chrX 17743589 17743625 chrX 17743694 17743730 6 101 2.0 4.5 3.2 1.4 141 chrX 17743589 intron CG42684 + chrX 17743660 intron CG42684 + chrX 17743730 intron CG42684 + chrX_6_17740001 chrX_17740001 RAL-911 2007 chrX 18020806 18020844 chrX 18020909 18020951 12 106 2.5 4.5 3.5 2.7 145 chrX 18020806 intron Sh - chrX 18020878 intron Sh - chrX 18020951 intron Sh - chrX_12_18020001 chrX_18020001 RAL-911 2008 chrX 18177008 18177042 chrX 18177121 18177155 10 112 2.0 0.0 1.0 5.0 147 chrX 18177008 intergenic not near genes chrX 18177082 intergenic not near genes chrX 18177155 intergenic Frq2 + chrX_10_18175001 chrX_18175001 RAL-911 2009 chrX 18194049 18194101 chrX 18194604 18194636 BS 8 549 1.5 2.5 2.0 2.7 587 chrX 18194049 intron Frq2 + chrX 18194342 intron Frq2 + chrX 18194636 intron Frq2 + chrX_8_18190001 chrX_18190001 RAL-911 2010 chrX 18411403 18411444 chrX 18411519 18411568 8 124 2.0 4.0 3.0 2.0 165 chrX 18411403 intergenic not near genes chrX 18411486 intergenic not near genes chrX 18411568 intergenic not near genes chrX_8_18410001 chrX_18410001 RAL-911 2011 chrX 18427375 18427409 chrX 18427805 18427805 6 422 2.0 1.0 1.5 2.4 430 chrX 18427375 intergenic CG42323 + chrX 18427590 intergenic not near genes chrX 18427805 intergenic not near genes chrX_6_18425001 chrX_18425001 RAL-911 2012 chrX 18429481 18429523 chrX 18434812 18434853 Transpac 10 5328 2.5 2.5 2.5 2.9 5372 chrX 18429481 intergenic not near genes chrX 18432167 intergenic not near genes chrX 18434853 intergenic not near genes chrX_10_18430001 chrX_18430001 RAL-911 2013 chrX 18455226 18455235 chrX 18455317 18455335 4 95 0.5 1.5 1.0 2.0 109 chrX 18455226 intron CG32547 - chrX 18455280 intron CG32547 - chrX 18455335 intron CG32547 - chrX_4_18455001 chrX_18455001 RAL-911 2014 chrX 18525630 18525655 chrX 18525730 18525738 5 96 2.0 5.5 3.8 1.0 108 chrX 18525630 intron Bx + chrX 18525684 intron Bx + chrX 18525738 intron Bx + chrX_5_18525001 chrX_18525001 RAL-911 2015 chrX 18529377 18529391 chrX 18529473 18529487 5 96 1.5 2.0 1.8 1.8 110 chrX 18529377 intron,3` UTR Bx +,CG15047 + chrX 18529432 intron,3` UTR Bx +,CG15047 + chrX 18529487 intron,3` UTR Bx +,CG15047 + chrX_5_18525001 chrX_18525001 RAL-911 2016 chrX 12946233 12946235 chrX 18572525 18572525 10 5626290 15.0 10.5 12.8 0.7 5626292 chrX 12946233 3` UTR fne + chrX 15759379 intron Graf - chrX 18572525 intergenic not near genes chrX_10_15755001 chrX_15755001 RAL-911 2017 chrX 18645010 18645048 chrX 18645128 18645150 5 115 1.0 1.5 1.2 2.3 140 chrX 18645010 intron Rip11 - chrX 18645080 intron Rip11 - chrX 18645150 intron Rip11 - chrX_5_18645001 chrX_18645001 RAL-911 2018 chrX 18896505 18896544 chrX 18896635 18896675 8 130 2.0 2.5 2.2 2.5 170 chrX 18896505 3` UTR CG7349 + chrX 18896590 intergenic CG7349 + chrX 18896675 intergenic CG7349 + chrX_8_18895001 chrX_18895001 RAL-911 2019 chrX 18950497 18950514 chrX 18950604 18950621 6 106 3.5 7.0 5.2 1.0 124 chrX 18950497 intron CG43759 + chrX 18950559 intron CG43759 + chrX 18950621 intron CG43759 + chrX_6_18950001 chrX_18950001 RAL-911 2020 chrX 18957053 18957090 chrX 18965736 18965773 roo 7 8680 5.0 5.5 5.2 1.1 8720 chrX 18957053 intron CG43759 + chrX 18961413 intron CG43759 + chrX 18965773 intron CG43759 + chrX_7_18960001 chrX_18960001 RAL-911 2021 chrX 18997681 18997698 chrX 18997892 18997909 4 211 5.5 2.0 3.8 0.8 228 chrX 18997681 intron CG43759 + chrX 18997795 intron CG43759 + chrX 18997909 intron CG43759 + chrX_4_18995001 chrX_18995001 RAL-911 2022 chrX 19020594 19020620 chrX 19020692 19020711 10 96 0.5 3.5 2.0 3.3 117 chrX 19020594 intron CG43759 + chrX 19020652 intron CG43759 + chrX 19020711 intron CG43759 + chrX_10_19020001 chrX_19020001 RAL-911 2023 chrX 19124423 19124464 chrX 19124531 19124573 5 107 2.5 5.0 3.8 1.0 150 chrX 19124423 intergenic CG15882 - chrX 19124498 intergenic CG15882 - chrX 19124573 intergenic CG15882 -,tgy - chrX_5_19120001 chrX_19120001 RAL-911 2024 chrX 19136540 19136564 chrX 19143479 19143504 412 4 6937 2.0 0.0 1.0 2.0 6964 chrX 19136540 intergenic not near genes chrX 19140022 intergenic not near genes chrX 19143504 3` UTR RhoGAP18B - chrX_4_19140001 chrX_19140001 RAL-911 2025 chrX 19240200 19240237 chrX 19240305 19240343 4 104 4.5 1.5 3.0 1.0 143 chrX 19240200 intron CG14196 - chrX 19240272 intron CG14196 - chrX 19240343 intron CG14196 - chrX_4_19240001 chrX_19240001 RAL-911 2026 chrX 19380156 19380180 chrX 19380402 19380441 pogo 4 256 2.5 1.0 1.8 1.4 285 chrX 19380156 intron kek5 + chrX 19380298 intron kek5 + chrX 19380441 intron kek5 + chrX_4_19380001 chrX_19380001 RAL-911 2027 chrX 19593932 19593967 chrX 19594037 19594072 9 105 1.0 2.5 1.8 3.2 140 chrX 19593932 exon CG14205 + chrX 19594002 intron CG14205 + chrX 19594072 intron CG14205 + chrX_9_19590001 chrX_19590001 RAL-911 2028 chrX 19595713 19595732 chrX 19595822 19595841 5 109 5.0 3.5 4.2 1.0 128 chrX 19595713 intergenic CG14205 + chrX 19595777 intergenic CG14205 + chrX 19595841 intergenic CG14205 + chrX_5_19595001 chrX_19595001 RAL-911 2029 chrX 19791209 19791254 chrX 19791324 19791358 7 113 0.0 0.0 0.0 7.0 149 chrX 19791209 intergenic not near genes chrX 19791284 intergenic not near genes chrX 19791358 intergenic not near genes chrX_7_19790001 chrX_19790001 RAL-911 2030 chrX 19971781 19971818 chrX 19971956 19971993 6 173 2.0 3.0 2.5 1.7 212 chrX 19971781 intergenic not near genes chrX 19971887 intergenic not near genes chrX 19971993 intergenic not near genes chrX_6_19970001 chrX_19970001 RAL-911 2031 chrX 19975810 19975829 chrX 19976062 19976081 8 252 6.0 3.0 4.5 1.5 271 chrX 19975810 intergenic not near genes chrX 19975946 intergenic not near genes chrX 19976081 intergenic not near genes chrX_8_19975001 chrX_19975001 RAL-911 2032 chrX 20065783 20065833 chrX 20065882 20065917 10 98 1.5 2.5 2.0 3.3 134 chrX 20065783 intergenic not near genes chrX 20065850 intergenic not near genes chrX 20065917 intergenic not near genes chrX_10_20065001 chrX_20065001 RAL-911 2033 chrX 20082740 20082780 chrX 20082839 20082874 5 94 1.5 1.5 1.5 2.0 134 chrX 20082740 intergenic not near genes chrX 20082807 intergenic not near genes chrX 20082874 intergenic not near genes chrX_5_20080001 chrX_20080001 RAL-911 2034 chrX 20124077 20124090 chrX 20124236 20124249 5 159 4.5 2.5 3.5 1.1 172 chrX 20124077 intron CG34331 + chrX 20124163 intron CG34331 + chrX 20124249 intron CG34331 + chrX_5_20120001 chrX_20120001 RAL-911 2035 chrX 20133153 20133171 chrX 20133286 20133303 4 132 2.0 2.0 2.0 1.3 150 chrX 20133153 intergenic CG15322 + chrX 20133228 intergenic CG15322 + chrX 20133303 intergenic CG15322 + chrX_4_20130001 chrX_20130001 RAL-911 2036 chrX 20144822 20144868 chrX 20145012 20145058 9 190 1.0 3.0 2.0 3.0 236 chrX 20144822 intergenic not near genes chrX 20144940 intergenic not near genes chrX 20145058 intergenic not near genes chrX_9_20140001 chrX_20140001 RAL-911 2037 chrX 20271488 20271525 chrX 20271600 20271636 10 108 3.0 0.0 1.5 4.0 148 chrX 20271488 intergenic not near genes chrX 20271562 intergenic not near genes chrX 20271636 intergenic not near genes chrX_10_20270001 chrX_20270001 RAL-911 2038 chrX 20279739 20279774 chrX 20279839 20279875 5 99 1.5 3.0 2.2 1.6 136 chrX 20279739 intergenic not near genes chrX 20279807 intergenic not near genes chrX 20279875 intergenic not near genes chrX_5_20275001 chrX_20275001 RAL-911 2039 chrX 20312864 20312907 chrX 20312961 20313005 9 90 1.0 2.0 1.5 3.6 141 chrX 20312864 intron CG1504 - chrX 20312934 intron CG1504 - chrX 20313005 intron CG1504 - chrX_9_20310001 chrX_20310001 RAL-911 2040 chrX 20369300 20369343 chrX 20369404 20369447 9 100 0.5 2.5 1.5 3.6 147 chrX 20369300 intergenic not near genes chrX 20369374 intergenic not near genes chrX 20369447 intergenic not near genes chrX_9_20365001 chrX_20365001 RAL-911 2041 chrX 20377338 20377350 chrX 20378815 20378837 hobo 4 1483 2.0 2.5 2.2 1.2 1499 chrX 20377338 intergenic not near genes chrX 20378088 intergenic not near genes chrX 20378837 intergenic not near genes chrX_4_20375001 chrX_20375001 RAL-911 2042 chrX 20415055 20415076 chrX 20415151 20415172 5 94 2.0 4.5 3.2 1.2 117 chrX 20415055 intergenic not near genes chrX 20415114 intergenic not near genes chrX 20415172 intergenic not near genes chrX_5_20415001 chrX_20415001 RAL-911 2043 chrX 20456639 20456677 chrX 20456761 20456793 6 118 5.0 3.0 4.0 1.2 154 chrX 20456639 intron CG32506 + chrX 20456716 intron CG32506 + chrX 20456793 intron CG32506 + chrX_6_20455001 chrX_20455001 RAL-911 2044 chrX 20468003 20468027 chrX 20468112 20468130 7 108 5.5 0.0 2.8 1.8 127 chrX 20468003 intron GstT3 + chrX 20468066 intron GstT3 + chrX 20468130 intron GstT3 + chrX_7_20465001 chrX_20465001 RAL-911 2045 chrX 20484374 20484404 chrX 20484494 20484517 5 121 3.5 2.5 3.0 1.2 143 chrX 20484374 intron RhoGAP19D - chrX 20484446 intron RhoGAP19D - chrX 20484517 intron RhoGAP19D - chrX_5_20480001 chrX_20480001 RAL-911 2046 chrX 20528588 20528633 chrX 20528951 20528961 10 363 3.5 5.5 4.5 1.8 373 chrX 20528588 intergenic not near genes chrX 20528774 intergenic not near genes chrX 20528961 intergenic not near genes chrX_10_20525001 chrX_20525001 RAL-911 2047 chrX 20531680 20531713 chrX 20531789 20531815 4 108 0.0 1.5 0.8 2.2 135 chrX 20531680 intergenic not near genes chrX 20531748 intergenic not near genes chrX 20531815 intergenic not near genes chrX_4_20530001 chrX_20530001 RAL-911 2048 chrX 20668062 20668103 chrX 20668167 20668208 17 105 2.0 9.0 5.5 2.6 146 chrX 20668062 intron CG1835 + chrX 20668135 intron CG1835 + chrX 20668208 intron CG1835 + chrX_17_20665001 chrX_20665001 RAL-911 2049 chrX 20780227 20780232 chrX 20780453 20780477 5 241 1.5 1.5 1.5 2.0 250 chrX 20780227 intron,3` UTR shakB -,CG32507 - chrX 20780352 intron,3` UTR shakB -,CG32507 - chrX 20780477 intron,3` UTR shakB -,CG32507 - chrX_5_20780001 chrX_20780001 RAL-911 2050 chrX 20791549 20791819 chrX 20791669 20791910 7 105 1.5 1.0 1.2 3.2 361 chrX 20791549 intron shakB - chrX 20791730 intron shakB - chrX 20791910 intron shakB - chrX_7_20790001 chrX_20790001 RAL-911 2051 chrX 20836727 20836754 chrX 20844348 20844369 roo 9 7618 3.0 6.0 4.5 1.6 7642 chrX 20836727 intron shakB - chrX 20840548 intron shakB - chrX 20844369 intron shakB - chrX_9_20840001 chrX_20840001 RAL-911 2052 chrX 20940707 20940750 chrX 20942196 20942231 hobo 8 1486 0.5 1.5 1.0 4.0 1524 chrX 20940707 intergenic not near genes chrX 20941469 intergenic not near genes chrX 20942231 intergenic not near genes chrX_8_20940001 chrX_20940001 RAL-911 2053 chrX 20956977 20957006 chrX 20962431 20962468 I-element 8 5460 2.5 1.5 2.0 2.7 5491 chrX 20956977 intergenic not near genes chrX 20959722 intergenic not near genes chrX 20962468 intergenic Ser6 - chrX_8_20955001 chrX_20955001 RAL-911 2054 chrX 21055676 21055682 chrX 21055772 21055777 4 96 5.0 2.5 3.8 0.8 101 chrX 21055676 intron bves + chrX 21055726 intron bves + chrX 21055777 intron bves + chrX_4_21055001 chrX_21055001 RAL-911 2055 chrX 21055692 21055726 chrX 21055768 21055815 9 89 3.5 2.5 3.0 2.2 123 chrX 21055692 intron bves + chrX 21055754 intron bves + chrX 21055815 intron bves + chrX_9_21055001 chrX_21055001 RAL-911 2056 chrX 21061858 21061870 chrX 21062361 21062373 roo 10 505 6.0 2.5 4.2 1.9 515 chrX 21061858 intron bves + chrX 21062116 intron bves + chrX 21062373 intron,3` UTR bves +,CG32512 - chrX_10_21060001 chrX_21060001 RAL-911 2057 chrX 21076307 21076357 chrX 21076406 21076451 9 98 4.5 0.0 2.2 2.8 144 chrX 21076307 intron bves + chrX 21076379 intron bves + chrX 21076451 intron bves + chrX_9_21075001 chrX_21075001 RAL-911 2058 chrX 21077583 21077631 chrX 21077691 21077714 6 95 1.0 4.0 2.5 1.7 131 chrX 21077583 intron bves + chrX 21077648 intron bves + chrX 21077714 intron bves + chrX_6_21075001 chrX_21075001 RAL-911 2059 chrX 21086145 21086161 chrX 21087161 21087201 jockey 6 1035 3.5 2.0 2.8 1.6 1056 chrX 21086145 intergenic not near genes chrX 21086673 intergenic not near genes chrX 21087201 intergenic not near genes chrX_6_21085001 chrX_21085001 RAL-911 2060 chrX 21106398 21106444 chrX 21106498 21106543 10 100 4.0 1.0 2.5 2.9 145 chrX 21106398 intron,intron CG11566 +,stg1 + chrX 21106470 intron,intron CG11566 +,stg1 + chrX 21106543 intron,intron CG11566 +,stg1 + chrX_10_21105001 chrX_21105001 RAL-911 2061 chrX 21140895 21140910 chrX 21140997 21141012 4 102 4.0 1.0 2.5 1.1 117 chrX 21140895 3` UTR CG34120 + chrX 21140954 intergenic CG34120 + chrX 21141012 intergenic CG34120 + chrX_4_21140001 chrX_21140001 RAL-911 2062 chrX 21328100 21328148 chrX 21328231 21328279 8 131 4.0 1.5 2.8 2.1 179 chrX 21328100 3` UTR CG1486 + chrX 21328190 intergenic CG1486 +,tty - chrX 21328279 intergenic CG1486 +,tty - chrX_8_21325001 chrX_21325001 RAL-911 2063 chrX 21412841 21412851 chrX 21412957 21412968 4 117 0.0 0.0 0.0 4.0 127 chrX 21412841 intergenic not near genes chrX 21412904 intergenic not near genes chrX 21412968 intergenic not near genes chrX_4_21410001 chrX_21410001 RAL-911 2064 chrX 21419196 21419242 chrX 21419294 21419347 10 104 3.5 3.5 3.5 2.2 151 chrX 21419196 intergenic not near genes chrX 21419272 intergenic not near genes chrX 21419347 intergenic not near genes chrX_10_21415001 chrX_21415001 RAL-911 2065 chrX 21428320 21428366 chrX 21428530 21428575 7 200 2.5 3.0 2.8 1.8 255 chrX 21428320 intron CG42343 - chrX 21428448 intron CG42343 - chrX 21428575 intron CG42343 - chrX_7_21425001 chrX_21425001 RAL-911 2066 chrX 21458719 21458727 chrX 21464140 21464152 Ivk 5 5429 0.5 3.0 1.8 1.8 5433 chrX 21458719 intergenic not near genes chrX 21461436 intergenic not near genes chrX 21464152 intergenic not near genes chrX_5_21460001 chrX_21460001 RAL-911 2067 chrX 21467000 21467044 chrX 21467104 21467138 6 102 0.5 2.0 1.2 2.7 138 chrX 21467000 intergenic CR45507 - chrX 21467069 intergenic CR45507 - chrX 21467138 3` UTR CR45507 - chrX_6_21465001 chrX_21465001 RAL-911 2068 chrX 22478870 22478891 chrX 22479023 22479044 8 152 0.0 0.5 0.2 6.7 174 chrX 22478870 intron CG12576 - chrX 22478957 intron CG12576 - chrX 22479044 intron CG12576 - chrX_8_22475001 chrX_22475001 RAL-911 2069 chrX 22574810 22574831 chrX 22575065 22575086 5 255 0.5 1.0 0.8 2.8 276 chrX 22574810 intergenic not near genes chrX 22574948 intergenic not near genes chrX 22575086 intergenic not near genes chrX_5_22570001 chrX_22570001 RAL-911 2070 chrX 22784084 22784103 chrX 22784164 22784204 5 98 3.0 2.0 2.5 1.4 120 chrX 22784084 intron CR44997 + chrX 22784144 intron CR44997 + chrX 22784204 intron CR44997 + chrX_5_22780001 chrX_22780001 RAL-911 2071 chrX 22824240 22824448 chrX 22824386 22824599 16 147 3.5 4.0 3.8 3.3 359 chrX 22824240 intergenic fog - chrX 22824420 3` UTR fog - chrX 22824599 3` UTR fog - chrX_16_22820001 chrX_22820001 RAL-911 2072 chrX 22996294 22996335 chrX 23003548 23003589 roo 8 7254 3.0 4.5 3.8 1.7 7295 chrX 22996294 intron,intron stnA -,stnB - chrX 22999942 intron,intron stnA -,stnB - chrX 23003589 intron,intron stnA -,stnB - chrX_8_22995001 chrX_22995001 RAL-911 2073 chrX 23101275 23101308 chrX 23101440 23101473 9 165 2.0 3.0 2.5 2.6 198 chrX 23101275 intergenic su(f) + chrX 23101374 intergenic su(f) + chrX 23101473 intergenic su(f) + chrX_9_23100001 chrX_23100001 RAL-911 2074 chrY 1419886 1419915 chrY 1420157 1420189 5 273 11.5 11.0 11.2 0.4 303 chrY 1419886 intergenic not near genes chrY 1420038 intergenic not near genes chrY 1420189 intergenic not near genes chrY_5_1420001 chrY_1420001 RAL-911