SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47446 47488 chr2L 52571 52613 jockey 18 5125 4.5 6.5 5.5 2.8 5167 chr2L 47446 intron Cda5 - chr2L 50030 intron Cda5 - chr2L 52613 intron Cda5 - chr2L_18_50001 chr2L_50001 RAL-908 2 chr2L 263282 263319 chr2L 263446 263485 10 166 1.5 5.0 3.2 2.4 203 chr2L 263282 intron,3` UTR CG3645 -,CG17075 - chr2L 263384 intron,3` UTR CG3645 -,CG17075 - chr2L 263485 intron,3` UTR CG3645 -,CG17075 - chr2L_10_260001 chr2L_260001 RAL-908 3 chr2L 314272 314293 chr2L 314377 314399 5 102 5.5 1.0 3.2 1.2 127 chr2L 314272 intron Plc21C + chr2L 314336 intron Plc21C + chr2L 314399 intron Plc21C + chr2L_5_310001 chr2L_310001 RAL-908 4 chr2L 325129 325154 chr2L 325211 325215 6 84 2.5 4.5 3.5 1.3 86 chr2L 325129 intron Plc21C + chr2L 325172 intron Plc21C + chr2L 325215 intron Plc21C + chr2L_6_325001 chr2L_325001 RAL-908 5 chr2L 347867 347905 chr2L 355387 355425 blood 15 7520 4.5 5.5 5.0 2.5 7558 chr2L 347867 3` UTR Plc21C + chr2L 351646 intron Plc21C + chr2L 355425 3` UTR Plc21C + chr2L_15_350001 chr2L_350001 RAL-908 6 chr2L 371425 371457 chr2L 371524 371554 9 99 2.5 8.0 5.2 1.5 129 chr2L 371425 intergenic not near genes chr2L 371490 intergenic not near genes chr2L 371554 intergenic not near genes chr2L_9_370001 chr2L_370001 RAL-908 7 chr2L 407928 407972 chr2L 408029 408072 16 99 4.5 6.0 5.2 2.6 144 chr2L 407928 3` UTR RpI135 + chr2L 408000 intergenic AP-2alpha -,RpI135 + chr2L 408072 3` UTR AP-2alpha - chr2L_16_405001 chr2L_405001 RAL-908 8 chr2L 436856 436902 chr2L 436953 436999 17 95 4.0 3.5 3.8 3.5 143 chr2L 436856 intron ex + chr2L 436928 intron ex + chr2L 436999 intron ex + chr2L_17_435001 chr2L_435001 RAL-908 9 chr2L 590599 590638 chr2L 590720 590758 9 120 5.0 3.5 4.2 1.7 159 chr2L 590599 intron Gsc - chr2L 590678 intron Gsc - chr2L 590758 intron Gsc - chr2L_9_590001 chr2L_590001 RAL-908 10 chr2L 666271 666304 chr2L 666356 666400 4 88 0.5 0.0 0.2 3.3 129 chr2L 666271 intron ds - chr2L 666336 intron ds - chr2L 666400 intron ds - chr2L_4_665001 chr2L_665001 RAL-908 11 chr2L 686922 686944 chr2L 695962 695989 roo 9 9054 2.5 1.5 2.0 3.0 9067 chr2L 686922 intron ds - chr2L 691456 intron ds - chr2L 695989 intron ds - chr2L_9_690001 chr2L_690001 RAL-908 12 chr2L 763600 763619 chr2L 763671 763705 5 83 1.5 1.5 1.5 2.0 105 chr2L 763600 intergenic not near genes chr2L 763652 intergenic not near genes chr2L 763705 intergenic not near genes chr2L_5_760001 chr2L_760001 RAL-908 13 chr2L 764542 764591 chr2L 764643 764692 10 101 4.0 2.5 3.2 2.4 150 chr2L 764542 intergenic not near genes chr2L 764617 intergenic not near genes chr2L 764692 intergenic not near genes chr2L_10_760001 chr2L_760001 RAL-908 14 chr2L 770453 770493 chr2L 772249 772294 Bari1 6 1800 0.0 3.0 1.5 2.4 1841 chr2L 770453 intergenic not near genes chr2L 771374 intergenic not near genes chr2L 772294 intergenic CR44614 + chr2L_6_770001 chr2L_770001 RAL-908 15 chr2L 802462 802507 chr2L 802803 802848 11 341 4.0 5.5 4.8 1.9 386 chr2L 802462 intergenic not near genes chr2L 802655 intergenic not near genes chr2L 802848 intergenic not near genes chr2L_11_800001 chr2L_800001 RAL-908 16 chr2L 849452 849487 chr2L 849563 849598 7 107 1.5 3.5 2.5 2.0 146 chr2L 849452 intron drongo - chr2L 849525 intron drongo - chr2L 849598 intron drongo - chr2L_7_845001 chr2L_845001 RAL-908 17 chr2L 877823 877875 chr2L 877924 877976 6 101 0.0 4.0 2.0 2.0 153 chr2L 877823 3` UTR,exon CG15824 -,ninaA + chr2L 877900 3` UTR,intron CG15824 -,ninaA + chr2L 877976 3` UTR,exon CG15824 -,ninaA + chr2L_6_875001 chr2L_875001 RAL-908 18 chr2L 971893 971920 chr2L 972003 972017 5 106 4.5 1.5 3.0 1.2 124 chr2L 971893 intergenic not near genes chr2L 971955 intergenic not near genes chr2L 972017 intergenic not near genes chr2L_5_970001 chr2L_970001 RAL-908 19 chr2L 976732 976780 chr2L 976829 976877 13 94 0.5 2.5 1.5 5.2 145 chr2L 976732 intergenic not near genes chr2L 976804 intergenic not near genes chr2L 976877 intergenic not near genes chr2L_13_975001 chr2L_975001 RAL-908 20 chr2L 976860 976895 chr2L 984516 984546 roo 7 7655 3.5 1.5 2.5 2.0 7686 chr2L 976860 intergenic not near genes chr2L 980703 intergenic not near genes chr2L 984546 intergenic not near genes chr2L_7_980001 chr2L_980001 RAL-908 21 chr2L 996701 996747 chr2L 1005820 1005866 roo 7 9119 0.0 1.5 0.8 3.9 9165 chr2L 996701 intergenic not near genes chr2L 1001284 intergenic not near genes chr2L 1005866 intergenic not near genes chr2L_7_1000001 chr2L_1000001 RAL-908 22 chr2L 1039223 1039259 chr2L 1039316 1039364 6 98 2.0 1.0 1.5 2.4 141 chr2L 1039223 intron IA-2 - chr2L 1039294 intron IA-2 - chr2L 1039364 intron IA-2 - chr2L_6_1035001 chr2L_1035001 RAL-908 23 chr2L 1042584 1042615 chr2L 1042695 1042702 8 107 4.5 0.0 2.2 2.5 118 chr2L 1042584 intron IA-2 - chr2L 1042643 intron IA-2 - chr2L 1042702 intron IA-2 - chr2L_8_1040001 chr2L_1040001 RAL-908 24 chr2L 1073566 1073618 chr2L 1073675 1073727 13 108 2.5 3.5 3.0 3.2 161 chr2L 1073566 intron S - chr2L 1073646 intron S - chr2L 1073727 intron S - chr2L_13_1070001 chr2L_1070001 RAL-908 25 chr2L 1093136 1093175 chr2L 1093234 1093273 6 98 1.0 1.0 1.0 3.0 137 chr2L 1093136 intron CG4629 - chr2L 1093204 intron CG4629 - chr2L 1093273 intron CG4629 - chr2L_6_1090001 chr2L_1090001 RAL-908 26 chr2L 1164244 1164283 chr2L 1164356 1164395 10 112 1.5 1.0 1.2 4.5 151 chr2L 1164244 intergenic IntS14 +,CG5080 - chr2L 1164320 intergenic IntS14 +,CG5080 - chr2L 1164395 intergenic IntS14 + chr2L_10_1160001 chr2L_1160001 RAL-908 27 chr2L 1220111 1220160 chr2L 1227597 1227646 blood 14 7486 3.0 4.5 3.8 2.9 7535 chr2L 1220111 intron CG42329 + chr2L 1223878 intron CG42329 + chr2L 1227646 intron CG42329 + chr2L_14_1220001 chr2L_1220001 RAL-908 28 chr2L 1250953 1250958 chr2L 1251053 1251058 4 100 2.5 2.5 2.5 1.1 105 chr2L 1250953 intergenic not near genes chr2L 1251006 intergenic not near genes chr2L 1251058 intergenic not near genes chr2L_4_1250001 chr2L_1250001 RAL-908 29 chr2L 1282771 1282821 chr2L 1282886 1282937 13 113 2.5 1.0 1.8 4.6 166 chr2L 1282771 intron robo3 + chr2L 1282854 intron robo3 + chr2L 1282937 intron robo3 + chr2L_13_1280001 chr2L_1280001 RAL-908 30 chr2L 1322013 1322052 chr2L 1322118 1322124 9 103 3.0 3.0 3.0 2.2 111 chr2L 1322013 intergenic not near genes chr2L 1322068 intergenic not near genes chr2L 1322124 intergenic not near genes chr2L_9_1320001 chr2L_1320001 RAL-908 31 chr2L 1552651 1552670 chr2L 1552892 1552907 10 241 10.0 0.0 5.0 1.7 256 chr2L 1552651 intergenic not near genes chr2L 1552779 intergenic not near genes chr2L 1552907 intergenic not near genes chr2L_10_1550001 chr2L_1550001 RAL-908 32 chr2L 1556976 1557023 chr2L 1557085 1557136 13 113 2.0 4.5 3.2 3.1 160 chr2L 1556976 intron haf + chr2L 1557056 intron haf + chr2L 1557136 intron haf + chr2L_13_1555001 chr2L_1555001 RAL-908 33 chr2L 1570671 1570715 chr2L 1573563 1573607 F-element 12 2891 4.0 4.0 4.0 2.4 2936 chr2L 1570671 intron haf + chr2L 1572139 intron haf + chr2L 1573607 intron haf + chr2L_12_1570001 chr2L_1570001 RAL-908 34 chr2L 1591871 1591892 chr2L 1591953 1591996 12 101 3.5 1.5 2.5 3.4 125 chr2L 1591871 intron haf + chr2L 1591934 intron haf + chr2L 1591996 intron haf + chr2L_12_1590001 chr2L_1590001 RAL-908 35 chr2L 1635393 1635427 chr2L 1635548 1635583 7 156 3.0 6.5 4.8 1.2 190 chr2L 1635393 intergenic not near genes chr2L 1635488 intergenic not near genes chr2L 1635583 intergenic not near genes chr2L_7_1635001 chr2L_1635001 RAL-908 36 chr2L 1640322 1640349 chr2L 1640420 1640447 8 97 3.5 4.5 4.0 1.6 125 chr2L 1640322 intergenic not near genes chr2L 1640384 intergenic not near genes chr2L 1640447 intergenic not near genes chr2L_8_1640001 chr2L_1640001 RAL-908 37 chr2L 1644108 1644139 chr2L 1644351 1644382 8 243 2.5 2.5 2.5 2.3 274 chr2L 1644108 intergenic not near genes chr2L 1644245 intergenic not near genes chr2L 1644382 intergenic not near genes chr2L_8_1640001 chr2L_1640001 RAL-908 38 chr2L 1655339 1655371 chr2L 1655449 1655461 12 108 2.0 4.0 3.0 3.0 122 chr2L 1655339 intron chinmo + chr2L 1655400 intron chinmo + chr2L 1655461 intron chinmo + chr2L_12_1655001 chr2L_1655001 RAL-908 39 chr2L 1678959 1679005 chr2L 1686443 1686466 blood 11 7480 4.0 5.0 4.5 2.0 7507 chr2L 1678959 intron chinmo + chr2L 1682712 intron chinmo + chr2L 1686466 intron chinmo + chr2L_11_1680001 chr2L_1680001 RAL-908 40 chr2L 1711334 1711384 chr2L 1711678 1711728 mdg3 11 339 3.0 1.5 2.2 3.4 394 chr2L 1711334 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711531 3` UTR frtz - chr2L 1711728 3` UTR frtz - chr2L_11_1710001 chr2L_1710001 RAL-908 41 chr2L 1785653 1785701 chr2L 1785764 1785812 11 107 2.0 2.0 2.0 3.7 159 chr2L 1785653 intergenic Gr22e + chr2L 1785732 intergenic Gr22e + chr2L 1785812 intergenic not near genes chr2L_11_1785001 chr2L_1785001 RAL-908 42 chr2L 1883398 1883444 chr2L 1884000 1884044 10 598 0.0 1.0 0.5 6.7 646 chr2L 1883398 intron CG15358 - chr2L 1883721 intron CG15358 - chr2L 1884044 exon CG15358 - chr2L_10_1880001 chr2L_1880001 RAL-908 43 chr2L 1910519 1910561 chr2L 1910628 1910670 10 109 3.0 3.0 3.0 2.5 151 chr2L 1910519 intron CG7337 + chr2L 1910594 intron CG7337 + chr2L 1910670 intron CG7337 + chr2L_10_1910001 chr2L_1910001 RAL-908 44 chr2L 1988008 1988010 chr2L 1988143 1988145 4 135 0.0 3.5 1.8 1.4 137 chr2L 1988008 intergenic Got2 -,Npc2a + chr2L 1988076 intergenic Npc2a +,Got2 - chr2L 1988145 intergenic Npc2a +,Got2 - chr2L_4_1985001 chr2L_1985001 RAL-908 45 chr2L 1996890 1996935 chr2L 1996991 1997037 6 101 0.5 4.5 2.5 1.7 147 chr2L 1996890 intergenic CG33543 - chr2L 1996964 intergenic CG33543 - chr2L 1997037 intergenic CG33543 - chr2L_6_1995001 chr2L_1995001 RAL-908 46 chr2L 2007834 2007873 chr2L 2007962 2008001 15 128 1.5 4.5 3.0 3.8 167 chr2L 2007834 intergenic CR45712 + chr2L 2007918 intergenic CR45712 +,Nplp4 + chr2L 2008001 intergenic CR45712 +,Nplp4 + chr2L_15_2005001 chr2L_2005001 RAL-908 47 chr2L 2016111 2016161 chr2L 2016211 2016261 11 99 0.0 5.5 2.8 2.9 150 chr2L 2016111 intron CG4238 + chr2L 2016186 intron CG4238 + chr2L 2016261 intron CG4238 + chr2L_11_2015001 chr2L_2015001 RAL-908 48 chr2L 2075509 2075516 chr2L 2075615 2075622 4 106 3.0 5.5 4.2 0.8 113 chr2L 2075509 intron dpr3 - chr2L 2075566 intron dpr3 - chr2L 2075622 intron dpr3 - chr2L_4_2075001 chr2L_2075001 RAL-908 49 chr2L 2075519 2075542 chr2L 2075599 2075648 4 100 2.0 3.5 2.8 1.1 129 chr2L 2075519 intron dpr3 - chr2L 2075584 intron dpr3 - chr2L 2075648 intron dpr3 - chr2L_4_2075001 chr2L_2075001 RAL-908 50 chr2L 2100375 2100407 chr2L 2109545 2109547 roo 6 9165 3.0 2.5 2.8 1.6 9172 chr2L 2100375 intron dpr3 - chr2L 2104961 intron dpr3 - chr2L 2109547 intron dpr3 - chr2L_6_2100001 chr2L_2100001 RAL-908 51 chr2L 2250400 2250435 chr2L 2251186 2251222 6 782 6.0 0.0 3.0 1.5 822 chr2L 2250400 intergenic Ser12 - chr2L 2250811 exon Ser12 - chr2L 2251222 exon Ser12 - chr2L_6_2250001 chr2L_2250001 RAL-908 52 chr2L 2256465 2256476 chr2L 2256565 2256575 4 100 2.0 3.5 2.8 1.1 110 chr2L 2256465 intergenic not near genes chr2L 2256520 intergenic not near genes chr2L 2256575 intergenic not near genes chr2L_4_2255001 chr2L_2255001 RAL-908 53 chr2L 2260787 2260830 chr2L 2260893 2260936 8 105 2.0 3.5 2.8 2.1 149 chr2L 2260787 intergenic not near genes chr2L 2260862 intergenic not near genes chr2L 2260936 intergenic not near genes chr2L_8_2260001 chr2L_2260001 RAL-908 54 chr2L 2294020 2294055 chr2L 2299245 2299280 copia 4 5223 2.5 1.5 2.0 1.3 5260 chr2L 2294020 intergenic not near genes chr2L 2296650 intergenic not near genes chr2L 2299280 intergenic not near genes chr2L_4_2295001 chr2L_2295001 RAL-908 55 chr2L 2311063 2311084 chr2L 2311179 2311200 4 116 1.0 4.5 2.8 1.1 137 chr2L 2311063 intron CG9967 - chr2L 2311132 intron CG9967 - chr2L 2311200 intron CG9967 - chr2L_4_2310001 chr2L_2310001 RAL-908 56 chr2L 2372345 2372401 chr2L 2372451 2372501 5 104 0.0 2.5 1.2 2.3 156 chr2L 2372345 intergenic CG3609 - chr2L 2372423 intergenic CG3609 - chr2L 2372501 3` UTR CG3609 - chr2L_5_2370001 chr2L_2370001 RAL-908 57 chr2L 2396281 2396289 chr2L 2396379 2396387 6 98 0.0 5.0 2.5 1.7 106 chr2L 2396281 intron VGlut + chr2L 2396334 intron VGlut + chr2L 2396387 intron VGlut + chr2L_6_2395001 chr2L_2395001 RAL-908 58 chr2L 2431939 2431981 chr2L 2432330 2432343 12 389 2.5 7.0 4.8 2.1 404 chr2L 2431939 intron dpp + chr2L 2432141 intron dpp + chr2L 2432343 intron dpp + chr2L_12_2430001 chr2L_2430001 RAL-908 59 chr2L 2448317 2448353 chr2L 2449032 2449046 8 711 5.0 2.0 3.5 1.8 729 chr2L 2448317 intron dpp + chr2L 2448682 intron dpp + chr2L 2449046 intron dpp + chr2L_8_2445001 chr2L_2445001 RAL-908 60 chr2L 2466376 2466391 chr2L 2466489 2466504 4 113 3.0 0.0 1.5 1.6 128 chr2L 2466376 intergenic not near genes chr2L 2466440 intergenic not near genes chr2L 2466504 intergenic not near genes chr2L_4_2465001 chr2L_2465001 RAL-908 61 chr2L 2565535 2565561 chr2L 2571628 2571654 297 9 6093 3.0 4.5 3.8 1.9 6119 chr2L 2565535 exon Cyp309a2 - chr2L 2568594 intron Cyp309a2 - chr2L 2571654 exon Cyp309a2 - chr2L_9_2565001 chr2L_2565001 RAL-908 62 chr2L 2703427 2703438 chr2L 2703531 2703539 4 102 2.5 5.5 4.0 0.8 112 chr2L 2703427 intron CG31690 + chr2L 2703483 intron CG31690 + chr2L 2703539 intron CG31690 + chr2L_4_2700001 chr2L_2700001 RAL-908 63 chr2L 2713503 2713543 chr2L 2713622 2713622 8 113 4.5 5.5 5.0 1.3 119 chr2L 2713503 intron CG31690 + chr2L 2713562 intron CG31690 + chr2L 2713622 intron CG31690 + chr2L_8_2710001 chr2L_2710001 RAL-908 64 chr2L 2724384 2724439 chr2L 2724480 2724535 13 96 0.5 4.0 2.2 4.1 151 chr2L 2724384 intergenic not near genes chr2L 2724460 intergenic not near genes chr2L 2724535 intergenic not near genes chr2L_13_2720001 chr2L_2720001 RAL-908 65 chr2L 2772592 2772627 chr2L 2779194 2779194 297 11 6598 5.0 9.5 7.2 1.3 6602 chr2L 2772592 3` UTR Syt1 - chr2L 2775893 intron Syt1 - chr2L 2779194 3` UTR Syt1 - chr2L_11_2775001 chr2L_2775001 RAL-908 66 chr2L 2786095 2786134 chr2L 2786202 2786241 11 106 6.5 4.5 5.5 1.7 146 chr2L 2786095 intron Syt1 - chr2L 2786168 intron Syt1 - chr2L 2786241 intron Syt1 - chr2L_11_2785001 chr2L_2785001 RAL-908 67 chr2L 2800593 2800613 chr2L 2800696 2800716 4 103 3.0 0.0 1.5 1.6 123 chr2L 2800593 intergenic not near genes chr2L 2800654 intergenic not near genes chr2L 2800716 intergenic not near genes chr2L_4_2800001 chr2L_2800001 RAL-908 68 chr2L 2826523 2826567 chr2L 2826635 2826672 6 109 1.5 3.0 2.2 1.9 149 chr2L 2826523 intron Duox - chr2L 2826598 intron Duox - chr2L 2826672 intron Duox - chr2L_6_2825001 chr2L_2825001 RAL-908 69 chr2L 2857800 2857804 chr2L 2857896 2857900 4 96 6.0 2.0 4.0 0.8 100 chr2L 2857800 intron CG2991 + chr2L 2857850 intron CG2991 + chr2L 2857900 intron CG2991 + chr2L_4_2855001 chr2L_2855001 RAL-908 70 chr2L 2937400 2937449 chr2L 2937496 2937546 11 95 6.0 2.5 4.2 2.1 146 chr2L 2937400 intron lilli + chr2L 2937473 intron lilli + chr2L 2937546 intron lilli + chr2L_11_2935001 chr2L_2935001 RAL-908 71 chr2L 3073011 3073057 chr2L 3078234 3078280 copia 5 5223 3.0 3.0 3.0 1.2 5269 chr2L 3073011 intron toc - chr2L 3075646 intron toc - chr2L 3078280 intron toc - chr2L_5_3075001 chr2L_3075001 RAL-908 72 chr2L 3172053 3172094 chr2L 3172166 3172209 9 111 4.0 4.0 4.0 1.8 156 chr2L 3172053 intergenic not near genes chr2L 3172131 intergenic not near genes chr2L 3172209 intergenic not near genes chr2L_9_3170001 chr2L_3170001 RAL-908 73 chr2L 3251474 3251522 chr2L 3259059 3259107 springer 13 7583 1.0 6.0 3.5 2.9 7633 chr2L 3251474 intergenic not near genes chr2L 3255290 intergenic not near genes chr2L 3259107 intergenic not near genes chr2L_13_3255001 chr2L_3255001 RAL-908 74 chr2L 3261492 3261511 chr2L 3261604 3261623 5 112 1.5 5.0 3.2 1.2 131 chr2L 3261492 intergenic CR45338 -,CR45337 - chr2L 3261558 intergenic CR45338 -,CR45337 - chr2L 3261623 intergenic CR45338 -,CR45337 - chr2L_5_3260001 chr2L_3260001 RAL-908 75 chr2L 3291245 3291259 chr2L 3291316 3291358 6 92 7.0 2.0 4.5 1.1 113 chr2L 3291245 3` UTR CG9664 - chr2L 3291302 3` UTR CG9664 - chr2L 3291358 3` UTR CG9664 - chr2L_6_3290001 chr2L_3290001 RAL-908 76 chr2L 3312081 3312108 chr2L 3312206 3312233 13 124 0.0 0.0 0.0 13.0 152 chr2L 3312081 intron CG3277 + chr2L 3312157 intron CG3277 + chr2L 3312233 intron CG3277 + chr2L_13_3310001 chr2L_3310001 RAL-908 77 chr2L 3323239 3323284 chr2L 3323366 3323411 13 125 3.0 3.0 3.0 3.2 172 chr2L 3323239 intergenic CG8837 + chr2L 3323325 intergenic CG8837 + chr2L 3323411 intergenic CG8837 + chr2L_13_3320001 chr2L_3320001 RAL-908 78 chr2L 3384706 3384743 chr2L 3384806 3384847 4 102 0.0 0.0 0.0 4.0 141 chr2L 3384706 intergenic not near genes chr2L 3384776 intergenic not near genes chr2L 3384847 intergenic not near genes chr2L_4_3380001 chr2L_3380001 RAL-908 79 chr2L 3388578 3388629 chr2L 3388839 3388890 pogo 15 261 5.5 5.0 5.2 2.4 312 chr2L 3388578 intergenic CG42460 - chr2L 3388734 intergenic CG42460 - chr2L 3388890 intergenic CG42460 -,CR44791 + chr2L_15_3385001 chr2L_3385001 RAL-908 80 chr2L 3482131 3482175 chr2L 3482241 3482270 16 108 3.0 3.5 3.2 3.8 139 chr2L 3482131 intron CG15414 - chr2L 3482200 intron CG15414 - chr2L 3482270 intron CG15414 - chr2L_16_3480001 chr2L_3480001 RAL-908 81 chr2L 3590179 3590207 chr2L 3590280 3590288 5 97 1.5 5.0 3.2 1.2 109 chr2L 3590179 3` UTR CR43823 - chr2L 3590234 3` UTR CR43823 - chr2L 3590288 3` UTR CR43823 - chr2L_5_3590001 chr2L_3590001 RAL-908 82 chr2L 3649766 3649810 chr2L 3655003 3655045 copia 12 5235 0.0 7.5 3.8 2.5 5279 chr2L 3649766 intron for - chr2L 3652406 intron for - chr2L 3655045 intron for - chr2L_12_3650001 chr2L_3650001 RAL-908 83 chr2L 3784784 3784813 chr2L 3785663 3785681 16 878 27.5 17.5 22.5 0.7 897 chr2L 3784784 intergenic CG31960 + chr2L 3785232 exon CG31960 + chr2L 3785681 intergenic CG31958 +,CG31960 + chr2L_16_3785001 chr2L_3785001 RAL-908 84 chr2L 3788390 3788396 chr2L 3788504 3788510 4 114 6.0 4.0 5.0 0.7 120 chr2L 3788390 intron CG3921 + chr2L 3788450 intron CG3921 + chr2L 3788510 intron CG3921 + chr2L_4_3785001 chr2L_3785001 RAL-908 85 chr2L 3819012 3819034 chr2L 3819114 3819136 5 102 4.5 0.0 2.2 1.6 124 chr2L 3819012 intergenic CR44077 + chr2L 3819074 intergenic not near genes chr2L 3819136 intergenic not near genes chr2L_5_3815001 chr2L_3815001 RAL-908 86 chr2L 3896295 3896315 chr2L 3896394 3896412 7 97 6.0 0.0 3.0 1.8 117 chr2L 3896295 intron capu - chr2L 3896354 intron capu - chr2L 3896412 intron capu - chr2L_7_3895001 chr2L_3895001 RAL-908 87 chr2L 3936635 3936652 chr2L 3936735 3936752 8 100 2.5 5.0 3.8 1.7 117 chr2L 3936635 intron fred - chr2L 3936694 intron fred - chr2L 3936752 intron fred - chr2L_8_3935001 chr2L_3935001 RAL-908 88 chr2L 3959153 3959201 chr2L 3959249 3959297 12 96 3.0 2.0 2.5 3.4 144 chr2L 3959153 intron fred - chr2L 3959225 intron fred - chr2L 3959297 intron fred - chr2L_12_3955001 chr2L_3955001 RAL-908 89 chr2L 3985966 3985984 chr2L 3986064 3986082 5 98 3.5 1.0 2.2 1.6 116 chr2L 3985966 intron fred - chr2L 3986024 intron fred - chr2L 3986082 intron fred - chr2L_5_3985001 chr2L_3985001 RAL-908 90 chr2L 4037782 4037805 chr2L 4037889 4037912 7 107 6.0 4.0 5.0 1.2 130 chr2L 4037782 intron ed + chr2L 4037847 intron ed + chr2L 4037912 intron ed + chr2L_7_4035001 chr2L_4035001 RAL-908 91 chr2L 4066031 4066055 chr2L 4068860 4068900 Juan 6 2840 3.5 2.0 2.8 1.6 2869 chr2L 4066031 intron ed + chr2L 4067466 intron ed + chr2L 4068900 intron ed + chr2L_6_4065001 chr2L_4065001 RAL-908 92 chr2L 4123896 4123931 chr2L 4124095 4124130 20 198 7.0 2.5 4.8 3.4 234 chr2L 4123896 exon Sr-CI + chr2L 4124013 3` UTR Sr-CI + chr2L 4124130 3` UTR Sr-CI + chr2L_20_4120001 chr2L_4120001 RAL-908 93 chr2L 4150622 4150647 chr2L 4150706 4150742 8 94 1.0 1.0 1.0 4.0 120 chr2L 4150622 exon CG2955 + chr2L 4150682 exon CG2955 + chr2L 4150742 exon CG2955 + chr2L_8_4150001 chr2L_4150001 RAL-908 94 chr2L 4152262 4152316 chr2L 4152372 4152426 12 109 2.5 3.5 3.0 3.0 164 chr2L 4152262 intergenic not near genes chr2L 4152344 intergenic not near genes chr2L 4152426 intergenic not near genes chr2L_12_4150001 chr2L_4150001 RAL-908 95 chr2L 4166359 4166407 chr2L 4166460 4166499 15 101 3.0 4.0 3.5 3.3 140 chr2L 4166359 intergenic Or24a - chr2L 4166429 intergenic Or24a - chr2L 4166499 intergenic Or24a - chr2L_15_4165001 chr2L_4165001 RAL-908 96 chr2L 4181292 4181300 chr2L 4183944 4183952 Burdock 6 2652 3.0 5.5 4.2 1.2 2660 chr2L 4181292 intergenic not near genes chr2L 4182622 intergenic not near genes chr2L 4183952 intergenic not near genes chr2L_6_4180001 chr2L_4180001 RAL-908 97 chr2L 4184452 4184506 chr2L 4184791 4184845 10 339 0.5 4.5 2.5 2.9 393 chr2L 4184452 intergenic not near genes chr2L 4184648 intergenic not near genes chr2L 4184845 intergenic not near genes chr2L_10_4180001 chr2L_4180001 RAL-908 98 chr2L 4233355 4233385 chr2L 4233450 4233495 8 107 3.0 2.0 2.5 2.3 140 chr2L 4233355 intergenic not near genes chr2L 4233425 intergenic not near genes chr2L 4233495 intergenic not near genes chr2L_8_4230001 chr2L_4230001 RAL-908 99 chr2L 4265639 4265654 chr2L 4265749 4265762 5 109 6.5 0.0 3.2 1.2 123 chr2L 4265639 intergenic not near genes chr2L 4265700 intergenic not near genes chr2L 4265762 intergenic not near genes chr2L_5_4265001 chr2L_4265001 RAL-908 100 chr2L 4351460 4351502 chr2L 4351556 4351598 13 94 3.5 5.0 4.2 2.5 138 chr2L 4351460 intergenic CR44700 + chr2L 4351529 intergenic CR44700 + chr2L 4351598 intergenic CR44700 + chr2L_13_4350001 chr2L_4350001 RAL-908 101 chr2L 4389985 4390038 chr2L 4390084 4390137 8 99 2.5 1.0 1.8 2.9 152 chr2L 4389985 intron Tps1 + chr2L 4390061 intron Tps1 + chr2L 4390137 intron Tps1 + chr2L_8_4390001 chr2L_4390001 RAL-908 102 chr2L 4424493 4424537 chr2L 4424623 4424668 15 129 5.5 6.5 6.0 2.1 175 chr2L 4424493 intron CG15431 - chr2L 4424580 intron CG15431 - chr2L 4424668 intron CG15431 - chr2L_15_4420001 chr2L_4420001 RAL-908 103 chr2L 4586970 4586984 chr2L 4587065 4587092 6 107 1.0 4.0 2.5 1.7 122 chr2L 4586970 intron dp - chr2L 4587031 intron dp - chr2L 4587092 intron dp - chr2L_6_4585001 chr2L_4585001 RAL-908 104 chr2L 4586988 4586996 chr2L 4587057 4587087 4 95 0.5 3.0 1.8 1.4 99 chr2L 4586988 intron dp - chr2L 4587038 intron dp - chr2L 4587087 intron dp - chr2L_4_4585001 chr2L_4585001 RAL-908 105 chr2L 4595843 4595892 chr2L 4595953 4596002 11 110 4.0 0.0 2.0 3.7 159 chr2L 4595843 intron dp - chr2L 4595922 intron dp - chr2L 4596002 intron dp - chr2L_11_4595001 chr2L_4595001 RAL-908 106 chr2L 4601702 4601724 chr2L 4609163 4609180 mdg1 12 7460 3.5 4.0 3.8 2.5 7478 chr2L 4601702 intron dp - chr2L 4605441 intron dp - chr2L 4609180 intron dp - chr2L_12_4605001 chr2L_4605001 RAL-908 107 chr2L 4661826 4661853 chr2L 4669426 4669453 opus 13 7599 5.5 6.0 5.8 1.9 7627 chr2L 4661826 intergenic not near genes chr2L 4665640 intergenic not near genes chr2L 4669453 intergenic not near genes chr2L_13_4665001 chr2L_4665001 RAL-908 108 chr2L 4710327 4710368 chr2L 4710430 4710471 7 100 2.0 2.5 2.2 2.2 144 chr2L 4710327 intron CG34351 + chr2L 4710399 intron CG34351 + chr2L 4710471 intron CG34351 + chr2L_7_4710001 chr2L_4710001 RAL-908 109 chr2L 4819475 4819516 chr2L 4819618 4819658 8 143 4.5 1.0 2.8 2.1 183 chr2L 4819475 intergenic not near genes chr2L 4819566 intergenic not near genes chr2L 4819658 intergenic not near genes chr2L_8_4815001 chr2L_4815001 RAL-908 110 chr2L 4858444 4858478 chr2L 4858552 4858586 14 108 1.5 0.0 0.8 7.8 142 chr2L 4858444 intron pog + chr2L 4858515 intron pog + chr2L 4858586 intron pog + chr2L_14_4855001 chr2L_4855001 RAL-908 111 chr2L 4859898 4859914 chr2L 4860183 4860187 8 284 0.5 2.5 1.5 3.2 289 chr2L 4859898 intron pog + chr2L 4860042 intron pog + chr2L 4860187 intron pog + chr2L_8_4860001 chr2L_4860001 RAL-908 112 chr2L 4861163 4861207 chr2L 4861275 4861315 9 111 4.0 3.5 3.8 1.9 152 chr2L 4861163 intron pog + chr2L 4861239 intron pog + chr2L 4861315 intron pog + chr2L_9_4860001 chr2L_4860001 RAL-908 113 chr2L 4869452 4869498 chr2L 4869552 4869595 6 99 6.0 2.5 4.2 1.2 143 chr2L 4869452 intron pog + chr2L 4869524 intron pog + chr2L 4869595 intron pog + chr2L_6_4865001 chr2L_4865001 RAL-908 114 chr2L 4918162 4918187 chr2L 4923240 4923280 jockey 6 5090 8.0 7.5 7.8 0.7 5118 chr2L 4918162 intron hoe1 - chr2L 4920721 intron hoe1 - chr2L 4923280 intron hoe1 - chr2L_6_4920001 chr2L_4920001 RAL-908 115 chr2L 4925653 4925692 chr2L 4925752 4925791 6 99 5.0 1.0 3.0 1.5 138 chr2L 4925653 intron hoe1 - chr2L 4925722 intron hoe1 - chr2L 4925791 intron hoe1 - chr2L_6_4925001 chr2L_4925001 RAL-908 116 chr2L 4953504 4953537 chr2L 4953765 4953779 pogo 6 258 4.0 6.0 5.0 1.0 275 chr2L 4953504 intergenic Jon25Bii - chr2L 4953642 intergenic not near genes chr2L 4953779 intergenic Jon25Bi - chr2L_6_4950001 chr2L_4950001 RAL-908 117 chr2L 5025127 5025162 chr2L 5025218 5025258 4 93 3.5 0.5 2.0 1.3 131 chr2L 5025127 intron vkg - chr2L 5025192 intron vkg - chr2L 5025258 intron vkg - chr2L_4_5025001 chr2L_5025001 RAL-908 118 chr2L 5027961 5027969 chr2L 5028063 5028072 4 103 2.5 11.0 6.8 0.5 111 chr2L 5027961 intron vkg - chr2L 5028016 intron vkg - chr2L 5028072 intron vkg - chr2L_4_5025001 chr2L_5025001 RAL-908 119 chr2L 5027971 5027987 chr2L 5028047 5028061 5 92 2.5 7.5 5.0 0.8 90 chr2L 5027971 intron vkg - chr2L 5028016 intron vkg - chr2L 5028061 intron vkg - chr2L_5_5025001 chr2L_5025001 RAL-908 120 chr2L 5117278 5117324 chr2L 5117380 5117426 17 101 2.5 0.0 1.2 7.7 148 chr2L 5117278 intron Msp300 + chr2L 5117352 intron Msp300 + chr2L 5117426 intron Msp300 + chr2L_17_5115001 chr2L_5115001 RAL-908 121 chr2L 5120969 5121000 chr2L 5121070 5121113 8 112 5.0 0.5 2.8 2.1 144 chr2L 5120969 intron Msp300 + chr2L 5121041 intron Msp300 + chr2L 5121113 intron Msp300 + chr2L_8_5120001 chr2L_5120001 RAL-908 122 chr2L 5240986 5241005 chr2L 5241087 5241095 4 98 0.0 4.5 2.2 1.2 109 chr2L 5240986 intron tkv - chr2L 5241040 intron tkv - chr2L 5241095 intron tkv - chr2L_4_5240001 chr2L_5240001 RAL-908 123 chr2L 5242936 5242938 chr2L 16217660 16217660 6 10974724 14.5 13.0 13.8 0.4 10974724 chr2L 5242936 intron tkv - chr2L 10730298 3` UTR,5` UTR CG6443 +,CG17118 + chr2L 16217660 intergenic not near genes chr2L_6_10730001 chr2L_10730001 RAL-908 124 chr2L 5247263 5247280 chr2L 5247847 5247854 6 582 3.5 5.0 4.2 1.2 591 chr2L 5247263 intron tkv - chr2L 5247558 intron tkv - chr2L 5247854 intron tkv - chr2L_6_5245001 chr2L_5245001 RAL-908 125 chr2L 5342752 5342799 chr2L 5345152 5345199 Doc 19 2398 1.0 5.5 3.2 4.5 2447 chr2L 5342752 intergenic not near genes chr2L 5343976 intergenic not near genes chr2L 5345199 intergenic not near genes chr2L_19_5340001 chr2L_5340001 RAL-908 126 chr2L 5442122 5442167 chr2L 5443236 5443281 8 1113 4.5 5.5 5.0 1.3 1159 chr2L 5442122 intergenic not near genes chr2L 5442702 intergenic not near genes chr2L 5443281 intergenic not near genes chr2L_8_5440001 chr2L_5440001 RAL-908 127 chr2L 5508523 5508564 chr2L 5508618 5508660 12 96 4.5 4.5 4.5 2.2 137 chr2L 5508523 intergenic not near genes chr2L 5508592 intergenic not near genes chr2L 5508660 intergenic not near genes chr2L_12_5505001 chr2L_5505001 RAL-908 128 chr2L 5516647 5516681 chr2L 5516746 5516780 11 99 7.0 8.0 7.5 1.3 133 chr2L 5516647 intergenic not near genes chr2L 5516714 intergenic not near genes chr2L 5516780 intergenic not near genes chr2L_11_5515001 chr2L_5515001 RAL-908 129 chr2L 5563665 5563718 chr2L 5563769 5563822 15 104 0.0 3.0 1.5 6.0 157 chr2L 5563665 intergenic GluRIIB + chr2L 5563744 intergenic GluRIIB + chr2L 5563822 intergenic GluRIIB + chr2L_15_5560001 chr2L_5560001 RAL-908 130 chr2L 5573670 5573706 chr2L 5573766 5573802 9 96 3.0 5.0 4.0 1.8 132 chr2L 5573670 intergenic not near genes chr2L 5573736 intergenic not near genes chr2L 5573802 intergenic not near genes chr2L_9_5570001 chr2L_5570001 RAL-908 131 chr2L 5651489 5651501 chr2L 5651585 5651597 5 96 0.0 1.5 0.8 2.8 108 chr2L 5651489 intron CG31646 - chr2L 5651543 intron CG31646 - chr2L 5651597 intron CG31646 - chr2L_5_5650001 chr2L_5650001 RAL-908 132 chr2L 5790523 5790577 chr2L 5790740 5790794 16 216 2.0 3.0 2.5 4.6 271 chr2L 5790523 intron CG9171 - chr2L 5790658 intron CG9171 - chr2L 5790794 intron CG9171 - chr2L_16_5790001 chr2L_5790001 RAL-908 133 chr2L 5805933 5805983 chr2L 5806170 5806220 12 237 6.0 3.5 4.8 2.1 287 chr2L 5805933 intron CG11034 + chr2L 5806076 intron CG11034 + chr2L 5806220 intron CG11034 + chr2L_12_5805001 chr2L_5805001 RAL-908 134 chr2L 5814670 5814712 chr2L 5814773 5814809 12 102 2.5 2.0 2.2 3.8 139 chr2L 5814670 intergenic not near genes chr2L 5814740 intergenic not near genes chr2L 5814809 intergenic not near genes chr2L_12_5810001 chr2L_5810001 RAL-908 135 chr2L 5819659 5819708 chr2L 5819763 5819793 18 102 2.5 5.0 3.8 3.8 134 chr2L 5819659 intergenic not near genes chr2L 5819726 intergenic not near genes chr2L 5819793 intergenic not near genes chr2L_18_5815001 chr2L_5815001 RAL-908 136 chr2L 5827692 5827736 chr2L 5836720 5836764 roo 12 9021 7.0 1.5 4.2 2.3 9072 chr2L 5827692 intron TrissinR + chr2L 5832228 intron TrissinR + chr2L 5836764 intron TrissinR + chr2L_12_5830001 chr2L_5830001 RAL-908 137 chr2L 5839168 5839187 chr2L 5839256 5839256 7 94 1.5 1.5 1.5 2.8 88 chr2L 5839168 intron TrissinR + chr2L 5839212 intron TrissinR + chr2L 5839256 intron TrissinR + chr2L_7_5835001 chr2L_5835001 RAL-908 138 chr2L 5864653 5864698 chr2L 5865593 5865630 6 937 3.5 5.0 4.2 1.2 977 chr2L 5864653 intron rau - chr2L 5865142 intron rau - chr2L 5865630 intron rau - chr2L_6_5865001 chr2L_5865001 RAL-908 139 chr2L 5897574 5897628 chr2L 5897677 5897694 16 96 3.0 3.0 3.0 4.0 120 chr2L 5897574 intergenic not near genes chr2L 5897634 intergenic not near genes chr2L 5897694 intergenic not near genes chr2L_16_5895001 chr2L_5895001 RAL-908 140 chr2L 5904440 5904472 chr2L 5904540 5904572 12 99 1.5 0.0 0.8 6.7 132 chr2L 5904440 exon CG9021 - chr2L 5904506 intron CG9021 - chr2L 5904572 intron CG9021 - chr2L_12_5900001 chr2L_5900001 RAL-908 141 chr2L 5926253 5926451 chr2L 5926350 5926559 4 120 0.0 0.0 0.0 4.0 306 chr2L 5926253 intron dsf + chr2L 5926406 intron dsf + chr2L 5926559 intron dsf + chr2L_4_5925001 chr2L_5925001 RAL-908 142 chr2L 5931298 5931332 chr2L 5931429 5931464 16 131 4.0 5.5 4.8 2.8 166 chr2L 5931298 intron dsf + chr2L 5931381 intron dsf + chr2L 5931464 intron dsf + chr2L_16_5930001 chr2L_5930001 RAL-908 143 chr2L 5981095 5981147 chr2L 5981197 5981231 17 100 1.0 6.0 3.5 3.8 136 chr2L 5981095 intergenic chic - chr2L 5981163 intergenic chic - chr2L 5981231 intergenic chic - chr2L_17_5980001 chr2L_5980001 RAL-908 144 chr2L 5989025 5989030 chr2L 5989121 5989126 4 96 9.0 0.5 4.8 0.7 101 chr2L 5989025 intergenic ifc +,lid - chr2L 5989076 intergenic ifc +,lid - chr2L 5989126 intergenic ifc +,lid - chr2L_4_5985001 chr2L_5985001 RAL-908 145 chr2L 5993321 5993355 chr2L 5993427 5993466 8 110 1.0 1.0 1.0 4.0 145 chr2L 5993321 exon lid - chr2L 5993394 intron lid - chr2L 5993466 intron lid - chr2L_8_5990001 chr2L_5990001 RAL-908 146 chr2L 6007098 6007105 chr2L 6007193 6007199 6 96 7.0 2.5 4.8 1.0 101 chr2L 6007098 intergenic CG9098 -,Gal - chr2L 6007148 intergenic CG9098 -,Gal - chr2L 6007199 intergenic CG9098 -,Gal - chr2L_6_6005001 chr2L_6005001 RAL-908 147 chr2L 6029244 6029287 chr2L 6029341 6029394 7 106 3.5 0.0 1.8 2.5 150 chr2L 6029244 intron CG9109 - chr2L 6029319 intron CG9109 - chr2L 6029394 intron CG9109 - chr2L_7_6025001 chr2L_6025001 RAL-908 148 chr2L 6050420 6050463 chr2L 6050544 6050587 17 124 5.0 2.5 3.8 3.5 167 chr2L 6050420 3` UTR CG12393 + chr2L 6050504 intergenic CG12393 +,CG9135 + chr2L 6050587 intergenic CG12393 +,CG9135 + chr2L_17_6050001 chr2L_6050001 RAL-908 149 chr2L 6242963 6242985 chr2L 6243079 6243103 8 118 2.5 4.0 3.2 1.9 140 chr2L 6242963 intergenic not near genes chr2L 6243033 intergenic not near genes chr2L 6243103 intergenic not near genes chr2L_8_6240001 chr2L_6240001 RAL-908 150 chr2L 6279623 6279650 chr2L 6279722 6279749 INE-1 8 99 5.0 1.0 3.0 2.0 126 chr2L 6279623 intron Ddr + chr2L 6279686 intron Ddr + chr2L 6279749 intron Ddr + chr2L_8_6275001 chr2L_6275001 RAL-908 151 chr2L 6300547 6300591 chr2L 6300648 6300692 15 102 3.0 3.5 3.2 3.6 145 chr2L 6300547 intron Ddr + chr2L 6300620 intron Ddr + chr2L 6300692 intron Ddr + chr2L_15_6300001 chr2L_6300001 RAL-908 152 chr2L 6349062 6349074 chr2L 6349160 6349172 9 98 6.0 3.0 4.5 1.6 110 chr2L 6349062 intergenic CG9498 - chr2L 6349117 intergenic CG9498 - chr2L 6349172 intergenic CG9498 - chr2L_9_6345001 chr2L_6345001 RAL-908 153 chr2L 6363128 6363180 chr2L 6366070 6366122 Burdock 12 2941 3.5 2.5 3.0 3.0 2994 chr2L 6363128 intergenic not near genes chr2L 6364625 intergenic not near genes chr2L 6366122 intergenic not near genes chr2L_12_6360001 chr2L_6360001 RAL-908 154 chr2L 6426837 6426847 chr2L 6445117 6445127 roo 7 18280 10.0 2.5 6.2 1.0 18290 chr2L 6426837 3` UTR CG9527 - chr2L 6435982 intron CG9527 - chr2L 6445127 exon CG9527 - chr2L_7_6435001 chr2L_6435001 RAL-908 155 chr2L 6426850 6426874 chr2L 6445115 6445154 roo 12 18277 9.0 2.5 5.8 1.8 18304 chr2L 6426850 3` UTR CG9527 - chr2L 6436002 intron CG9527 - chr2L 6445154 exon CG9527 - chr2L_12_6435001 chr2L_6435001 RAL-908 156 chr2L 6537122 6537159 chr2L 6537220 6537257 7 98 2.0 7.0 4.5 1.3 135 chr2L 6537122 intron eya - chr2L 6537190 intron eya - chr2L 6537257 intron eya - chr2L_7_6535001 chr2L_6535001 RAL-908 157 chr2L 6544353 6544394 chr2L 6544465 6544506 15 112 4.5 2.0 3.2 3.6 153 chr2L 6544353 intron eya - chr2L 6544430 intron eya - chr2L 6544506 intron eya - chr2L_15_6540001 chr2L_6540001 RAL-908 158 chr2L 6553272 6553295 chr2L 6553390 6553408 5 117 2.5 8.0 5.2 0.8 136 chr2L 6553272 intergenic not near genes chr2L 6553340 intergenic not near genes chr2L 6553408 intergenic not near genes chr2L_5_6550001 chr2L_6550001 RAL-908 159 chr2L 6590079 6590114 chr2L 6590177 6590212 9 95 6.0 3.0 4.5 1.6 133 chr2L 6590079 intron CG11319 - chr2L 6590146 intron CG11319 - chr2L 6590212 intron CG11319 - chr2L_9_6590001 chr2L_6590001 RAL-908 160 chr2L 6626870 6626919 chr2L 6626975 6627023 12 103 3.0 3.5 3.2 2.9 153 chr2L 6626870 intron Oatp26F - chr2L 6626946 intron Oatp26F - chr2L 6627023 intron Oatp26F - chr2L_12_6625001 chr2L_6625001 RAL-908 161 chr2L 6640896 6640936 chr2L 6641005 6641006 10 105 4.5 1.5 3.0 2.5 110 chr2L 6640896 exon CG31635 - chr2L 6640951 intron CG31635 - chr2L 6641006 intron CG31635 - chr2L_10_6640001 chr2L_6640001 RAL-908 162 chr2L 6780947 6780987 chr2L 6781624 6781665 6 678 3.5 6.5 5.0 1.0 718 chr2L 6780947 intron nrv1 - chr2L 6781306 intron nrv1 - chr2L 6781665 intron nrv1 - chr2L_6_6780001 chr2L_6780001 RAL-908 163 chr2L 6799522 6799572 chr2L 6799630 6799680 12 107 0.0 4.0 2.0 4.0 158 chr2L 6799522 5` UTR CR43610 + chr2L 6799601 intergenic CR43610 +,CG17376 - chr2L 6799680 intergenic CR43610 +,CG17376 - chr2L_12_6795001 chr2L_6795001 RAL-908 164 chr2L 6876800 6876809 chr2L 6882968 6883015 diver 4 6190 4.0 5.5 4.8 0.7 6215 chr2L 6876800 intron Nlg2 + chr2L 6879908 intron Nlg2 + chr2L 6883015 intron Nlg2 + chr2L_4_6875001 chr2L_6875001 RAL-908 165 chr2L 6891433 6891465 chr2L 6891551 6891583 9 118 3.0 3.5 3.2 2.1 150 chr2L 6891433 intron Nlg2 + chr2L 6891508 intron Nlg2 + chr2L 6891583 intron Nlg2 + chr2L_9_6890001 chr2L_6890001 RAL-908 166 chr2L 7111737 7111764 chr2L 7111843 7111870 10 106 3.0 0.0 1.5 4.0 133 chr2L 7111737 intron Pvf3 - chr2L 7111804 intron Pvf3 - chr2L 7111870 intron Pvf3 - chr2L_10_7110001 chr2L_7110001 RAL-908 167 chr2L 7125771 7125810 chr2L 7125907 7125946 8 136 2.0 3.5 2.8 2.1 175 chr2L 7125771 intron Pvf3 - chr2L 7125858 intron Pvf3 - chr2L 7125946 intron Pvf3 - chr2L_8_7125001 chr2L_7125001 RAL-908 168 chr2L 7126841 7126874 chr2L 7126940 7126973 14 98 6.5 0.0 3.2 3.3 132 chr2L 7126841 intron Pvf3 - chr2L 7126907 intron Pvf3 - chr2L 7126973 intron Pvf3 - chr2L_14_7125001 chr2L_7125001 RAL-908 169 chr2L 7197981 7198018 chr2L 7198080 7198117 8 96 2.5 3.5 3.0 2.0 136 chr2L 7197981 intron CG4502 - chr2L 7198049 intron CG4502 - chr2L 7198117 intron CG4502 - chr2L_8_7195001 chr2L_7195001 RAL-908 170 chr2L 7217217 7217239 chr2L 7217341 7217348 10 123 3.0 0.5 1.8 3.6 131 chr2L 7217217 intron CG13784 - chr2L 7217282 intron CG13784 - chr2L 7217348 intron CG13784 - chr2L_10_7215001 chr2L_7215001 RAL-908 171 chr2L 7217241 7217269 chr2L 7217340 7217394 7 118 2.5 0.5 1.5 2.8 153 chr2L 7217241 intron CG13784 - chr2L 7217318 intron CG13784 - chr2L 7217394 intron CG13784 - chr2L_7_7215001 chr2L_7215001 RAL-908 172 chr2L 7254517 7254547 chr2L 7254615 7254645 12 98 0.0 3.0 1.5 4.8 128 chr2L 7254517 intergenic not near genes chr2L 7254581 intergenic not near genes chr2L 7254645 intergenic not near genes chr2L_12_7250001 chr2L_7250001 RAL-908 173 chr2L 7325910 7325951 chr2L 7326015 7326023 5 93 3.0 5.0 4.0 1.0 113 chr2L 7325910 intergenic not near genes chr2L 7325966 intergenic not near genes chr2L 7326023 intergenic not near genes chr2L_5_7325001 chr2L_7325001 RAL-908 174 chr2L 7335181 7335206 chr2L 7335298 7335318 8 116 6.5 2.0 4.2 1.5 137 chr2L 7335181 intron Wnt6 + chr2L 7335250 intron Wnt6 + chr2L 7335318 intron Wnt6 + chr2L_8_7335001 chr2L_7335001 RAL-908 175 chr2L 7336982 7337020 chr2L 7337079 7337117 12 96 3.0 3.0 3.0 3.0 135 chr2L 7336982 intron Wnt6 + chr2L 7337050 intron Wnt6 + chr2L 7337117 intron Wnt6 + chr2L_12_7335001 chr2L_7335001 RAL-908 176 chr2L 7343307 7343354 chr2L 7350443 7350490 roo 7 7136 3.5 3.0 3.2 1.7 7183 chr2L 7343307 intron Wnt6 + chr2L 7346898 intron Wnt6 + chr2L 7350490 intron Wnt6 + chr2L_7_7345001 chr2L_7345001 RAL-908 177 chr2L 7357546 7357557 chr2L 7357643 7357654 8 96 1.5 7.0 4.2 1.5 108 chr2L 7357546 intergenic not near genes chr2L 7357600 intergenic not near genes chr2L 7357654 intergenic not near genes chr2L_8_7355001 chr2L_7355001 RAL-908 178 chr2L 7399290 7399303 chr2L 7399680 7399696 7 392 1.5 5.0 3.2 1.7 406 chr2L 7399290 intergenic not near genes chr2L 7399493 intergenic not near genes chr2L 7399696 intergenic not near genes chr2L_7_7395001 chr2L_7395001 RAL-908 179 chr2L 7399307 7399334 chr2L 7399679 7399727 5 389 1.5 5.0 3.2 1.2 420 chr2L 7399307 intergenic not near genes chr2L 7399517 intergenic not near genes chr2L 7399727 intergenic not near genes chr2L_5_7395001 chr2L_7395001 RAL-908 180 chr2L 7405756 7405809 chr2L 7405856 7405909 7 95 3.0 1.5 2.2 2.2 153 chr2L 7405756 exon CG5177 + chr2L 7405832 intron CG5177 + chr2L 7405909 intron CG5177 + chr2L_7_7405001 chr2L_7405001 RAL-908 181 chr2L 7406961 7406972 chr2L 7407088 7407094 4 126 0.0 0.0 0.0 4.0 133 chr2L 7406961 intron CG5177 + chr2L 7407028 intron CG5177 + chr2L 7407094 intron CG5177 + chr2L_4_7405001 chr2L_7405001 RAL-908 182 chr2L 7486249 7486259 chr2L 7486346 7486356 4 97 0.0 8.0 4.0 0.8 107 chr2L 7486249 intron Ziz - chr2L 7486302 intron Ziz - chr2L 7486356 intron Ziz - chr2L_4_7485001 chr2L_7485001 RAL-908 183 chr2L 7489589 7489599 chr2L 7489715 7489725 5 125 5.0 0.0 2.5 1.4 136 chr2L 7489589 intron Ziz - chr2L 7489657 intron Ziz - chr2L 7489725 intron Ziz - chr2L_5_7485001 chr2L_7485001 RAL-908 184 chr2L 7502718 7502763 chr2L 7502814 7502859 20 94 3.5 5.5 4.5 3.6 141 chr2L 7502718 intron RapGAP1 - chr2L 7502788 intron RapGAP1 - chr2L 7502859 intron RapGAP1 - chr2L_20_7500001 chr2L_7500001 RAL-908 185 chr2L 7579171 7579207 chr2L 7579382 7579418 BS 15 211 6.5 0.0 3.2 3.6 247 chr2L 7579171 intergenic RapGAP1 - chr2L 7579294 intergenic RapGAP1 - chr2L 7579418 intergenic RapGAP1 - chr2L_15_7575001 chr2L_7575001 RAL-908 186 chr2L 7585487 7585498 chr2L 7585606 7585617 6 119 3.0 1.5 2.2 1.9 130 chr2L 7585487 intergenic not near genes chr2L 7585552 intergenic not near genes chr2L 7585617 intergenic not near genes chr2L_6_7585001 chr2L_7585001 RAL-908 187 chr2L 7609672 7609718 chr2L 7609768 7609814 7 96 4.0 5.0 4.5 1.3 142 chr2L 7609672 intron CG6739 + chr2L 7609743 intron CG6739 + chr2L 7609814 intron CG6739 + chr2L_7_7605001 chr2L_7605001 RAL-908 188 chr2L 7638530 7638584 chr2L 7638627 7638676 4 96 2.5 0.0 1.2 1.8 146 chr2L 7638530 intergenic not near genes chr2L 7638603 intergenic not near genes chr2L 7638676 intergenic not near genes chr2L_4_7635001 chr2L_7635001 RAL-908 189 chr2L 7664624 7664648 chr2L 7664967 7665016 8 365 3.5 3.5 3.5 1.8 392 chr2L 7664624 intron Slob - chr2L 7664820 intron Slob - chr2L 7665016 intron Slob - chr2L_8_7660001 chr2L_7660001 RAL-908 190 chr2L 7867550 7867603 chr2L 7867664 7867671 20 112 3.0 4.0 3.5 4.4 121 chr2L 7867550 intron Proc - chr2L 7867610 intron Proc - chr2L 7867671 intron Proc - chr2L_20_7865001 chr2L_7865001 RAL-908 191 chr2L 7952707 7952722 chr2L 7952861 7952879 5 156 0.0 1.5 0.8 2.8 172 chr2L 7952707 intron Snoo - chr2L 7952793 intron Snoo - chr2L 7952879 intron Snoo - chr2L_5_7950001 chr2L_7950001 RAL-908 192 chr2L 7959022 7959045 chr2L 7960453 7960476 pogo 6 1431 6.0 0.0 3.0 1.5 1454 chr2L 7959022 intron Snoo - chr2L 7959749 intron Snoo - chr2L 7960476 intron Snoo - chr2L_6_7955001 chr2L_7955001 RAL-908 193 chr2L 7977069 7977108 chr2L 7984065 7984104 297 9 6996 3.0 2.0 2.5 2.6 7035 chr2L 7977069 intron Snoo - chr2L 7980586 intron Snoo - chr2L 7984104 intron,5` UTR Snoo -,CG7231 + chr2L_9_7980001 chr2L_7980001 RAL-908 194 chr2L 8003009 8003062 chr2L 8003111 8003164 11 100 2.0 5.5 3.8 2.3 155 chr2L 8003009 intron Wwox - chr2L 8003086 intron Wwox - chr2L 8003164 intron Wwox - chr2L_11_8000001 chr2L_8000001 RAL-908 195 chr2L 8013596 8013611 chr2L 8018821 8018836 copia 7 5225 9.0 0.0 4.5 1.3 5240 chr2L 8013596 intron Tg + chr2L 8016216 intron Tg + chr2L 8018836 intron Tg + chr2L_7_8015001 chr2L_8015001 RAL-908 196 chr2L 8013627 8013643 chr2L 8023583 8023599 copia 5 9956 4.5 3.0 3.8 1.0 9972 chr2L 8013627 intron Tg + chr2L 8018613 intron Tg + chr2L 8023599 intron Tg + chr2L_5_8015001 chr2L_8015001 RAL-908 197 chr2L 8018826 8018831 chr2L 8023630 8023635 Doc 5 4804 0.0 9.0 4.5 0.9 4809 chr2L 8018826 intron Tg + chr2L 8021230 intron Tg + chr2L 8023635 intron Tg + chr2L_5_8020001 chr2L_8020001 RAL-908 198 chr2L 8044079 8044121 chr2L 8044178 8044214 10 95 3.0 2.5 2.8 2.6 135 chr2L 8044079 intron CG7466 + chr2L 8044146 intron CG7466 + chr2L 8044214 intron CG7466 + chr2L_10_8040001 chr2L_8040001 RAL-908 199 chr2L 8167128 8167176 chr2L 8167239 8167256 19 108 4.0 5.0 4.5 3.5 128 chr2L 8167128 intron Piezo + chr2L 8167192 intron Piezo + chr2L 8167256 intron Piezo + chr2L_19_8165001 chr2L_8165001 RAL-908 200 chr2L 8171277 8171293 chr2L 8171378 8171392 7 101 0.0 11.0 5.5 1.1 115 chr2L 8171277 intron Piezo + chr2L 8171334 intron Piezo + chr2L 8171392 intron Piezo + chr2L_7_8170001 chr2L_8170001 RAL-908 201 chr2L 8184905 8184951 chr2L 8185016 8185062 11 111 4.0 4.0 4.0 2.2 157 chr2L 8184905 intron Piezo + chr2L 8184984 intron Piezo + chr2L 8185062 intron Piezo + chr2L_11_8180001 chr2L_8180001 RAL-908 202 chr2L 8244716 8244746 chr2L 8244858 8244888 4 142 1.0 4.0 2.5 1.1 172 chr2L 8244716 intron CG8086 - chr2L 8244802 intron CG8086 - chr2L 8244888 intron CG8086 - chr2L_4_8240001 chr2L_8240001 RAL-908 203 chr2L 8286282 8286328 chr2L 8286389 8286435 9 106 1.5 3.0 2.2 2.8 153 chr2L 8286282 intron Btk29A - chr2L 8286358 intron Btk29A - chr2L 8286435 intron Btk29A - chr2L_9_8285001 chr2L_8285001 RAL-908 204 chr2L 8336926 8336961 chr2L 8337025 8337059 7 99 0.0 3.5 1.8 2.5 133 chr2L 8336926 intergenic not near genes chr2L 8336992 intergenic not near genes chr2L 8337059 intergenic not near genes chr2L_7_8335001 chr2L_8335001 RAL-908 205 chr2L 8452403 8452451 chr2L 8461593 8461642 roo 9 9190 4.5 4.5 4.5 1.6 9239 chr2L 8452403 intron fu12 - chr2L 8457022 intron fu12 - chr2L 8461642 intron fu12 - chr2L_9_8455001 chr2L_8455001 RAL-908 206 chr2L 8498194 8498235 chr2L 8498295 8498336 14 101 3.0 3.5 3.2 3.3 142 chr2L 8498194 intron Dh31 - chr2L 8498265 intron Dh31 - chr2L 8498336 intron Dh31 - chr2L_14_8495001 chr2L_8495001 RAL-908 207 chr2L 8508970 8508997 chr2L 8509092 8509119 7 122 0.0 3.5 1.8 2.5 149 chr2L 8508970 intergenic CG13096 - chr2L 8509044 intergenic CG13096 - chr2L 8509119 3` UTR CG13096 - chr2L_7_8505001 chr2L_8505001 RAL-908 208 chr2L 8594449 8594486 chr2L 8601523 8601560 297 12 7073 4.5 3.0 3.8 2.5 7111 chr2L 8594449 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598004 intron Sema-1a + chr2L 8601560 intron Sema-1a + chr2L_12_8595001 chr2L_8595001 RAL-908 209 chr2L 8704826 8704859 chr2L 8705108 8705141 7 280 2.5 3.0 2.8 1.8 315 chr2L 8704826 intron,5` UTR Hnf4 -,CR44992 + chr2L 8704984 intron,5` UTR Hnf4 -,CR44992 + chr2L 8705141 intron,5` UTR Hnf4 -,CR44992 + chr2L_7_8700001 chr2L_8700001 RAL-908 210 chr2L 8723102 8723144 chr2L 8731499 8731541 Tirant 17 8396 2.0 5.5 3.8 3.5 8439 chr2L 8723102 intron raw - chr2L 8727322 intron raw - chr2L 8731541 intron raw - chr2L_17_8725001 chr2L_8725001 RAL-908 211 chr2L 8736246 8736256 chr2L 8736346 8736356 9 100 0.5 3.5 2.0 3.0 110 chr2L 8736246 intron raw - chr2L 8736301 intron raw - chr2L 8736356 intron raw - chr2L_9_8735001 chr2L_8735001 RAL-908 212 chr2L 8799781 8799829 chr2L 8799917 8799960 14 129 5.0 3.5 4.2 2.7 179 chr2L 8799781 intergenic not near genes chr2L 8799870 intergenic not near genes chr2L 8799960 intergenic not near genes chr2L_14_8795001 chr2L_8795001 RAL-908 213 chr2L 8815726 8815776 chr2L 8815827 8815877 5 101 1.5 4.0 2.8 1.3 151 chr2L 8815726 intergenic not near genes chr2L 8815802 intergenic not near genes chr2L 8815877 intergenic not near genes chr2L_5_8815001 chr2L_8815001 RAL-908 214 chr2L 8939652 8939690 chr2L 8939752 8939781 13 99 5.5 7.0 6.2 1.8 129 chr2L 8939652 3` UTR Tsp29Fb + chr2L 8939716 3` UTR Tsp29Fb + chr2L 8939781 intergenic CG9510 -,Tsp29Fb + chr2L_13_8935001 chr2L_8935001 RAL-908 215 chr2L 8956203 8956228 chr2L 8956300 8956325 4 97 7.5 4.5 6.0 0.6 122 chr2L 8956203 intron CG31886 - chr2L 8956264 intron CG31886 - chr2L 8956325 intron CG31886 - chr2L_4_8955001 chr2L_8955001 RAL-908 216 chr2L 8976205 8976253 chr2L 8976317 8976364 8 108 0.5 3.0 1.8 2.9 159 chr2L 8976205 intergenic not near genes chr2L 8976284 intergenic not near genes chr2L 8976364 intergenic not near genes chr2L_8_8975001 chr2L_8975001 RAL-908 217 chr2L 9084339 9084340 chr2L 16217660 16217660 8 7133321 9.0 13.0 11.0 0.7 7133321 chr2L 9084339 intron Toll-4 + chr2L 12651000 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_8_12650001 chr2L_12650001 RAL-908 218 chr2L 9217953 9217996 chr2L 9222760 9222803 Doc 9 4805 2.5 7.0 4.8 1.6 4850 chr2L 9217953 intron tai + chr2L 9220378 intron tai + chr2L 9222803 intron tai + chr2L_9_9220001 chr2L_9220001 RAL-908 219 chr2L 9225835 9225881 chr2L 9225945 9225991 9 110 5.0 3.0 4.0 1.8 156 chr2L 9225835 intron tai + chr2L 9225913 intron tai + chr2L 9225991 intron tai + chr2L_9_9225001 chr2L_9225001 RAL-908 220 chr2L 9251138 9251175 chr2L 9251255 9251292 9 116 7.0 4.0 5.5 1.4 154 chr2L 9251138 intergenic aust -,borr - chr2L 9251215 intergenic aust -,borr - chr2L 9251292 intergenic borr -,aust - chr2L_9_9250001 chr2L_9250001 RAL-908 221 chr2L 9287302 9287350 chr2L 9287419 9287467 11 116 1.0 1.5 1.2 5.0 165 chr2L 9287302 intron Ggamma30A + chr2L 9287384 intron Ggamma30A + chr2L 9287467 intron Ggamma30A + chr2L_11_9285001 chr2L_9285001 RAL-908 222 chr2L 9303500 9303547 chr2L 9303600 9303647 13 99 0.5 3.0 1.8 4.6 147 chr2L 9303500 intergenic not near genes chr2L 9303574 intergenic not near genes chr2L 9303647 intergenic not near genes chr2L_13_9300001 chr2L_9300001 RAL-908 223 chr2L 9304491 9304510 chr2L 9304586 9304609 9 97 4.0 4.5 4.2 1.7 118 chr2L 9304491 3` UTR CR42844 - chr2L 9304550 3` UTR CR42844 - chr2L 9304609 3` UTR CR42844 - chr2L_9_9300001 chr2L_9300001 RAL-908 224 chr2L 9304511 9304518 chr2L 9304583 9304616 6 94 2.5 4.5 3.5 1.3 105 chr2L 9304511 3` UTR CR42844 - chr2L 9304564 3` UTR CR42844 - chr2L 9304616 3` UTR CR42844 - chr2L_6_9300001 chr2L_9300001 RAL-908 225 chr2L 9346723 9346760 chr2L 9346832 9346869 4 109 8.0 1.5 4.8 0.7 146 chr2L 9346723 intergenic not near genes chr2L 9346796 intergenic not near genes chr2L 9346869 intergenic not near genes chr2L_4_9345001 chr2L_9345001 RAL-908 226 chr2L 9393483 9393524 chr2L 9396469 9396510 jockey 11 2987 3.5 3.5 3.5 2.4 3027 chr2L 9393483 intron Shawl - chr2L 9394996 intron Shawl - chr2L 9396510 intron Shawl - chr2L_11_9390001 chr2L_9390001 RAL-908 227 chr2L 9407889 9407903 chr2L 9407990 9408005 4 102 4.5 3.0 3.8 0.8 116 chr2L 9407889 intron Shawl - chr2L 9407947 intron Shawl - chr2L 9408005 intron Shawl - chr2L_4_9405001 chr2L_9405001 RAL-908 228 chr2L 9441304 9441357 chr2L 9441428 9441481 8 124 1.0 2.5 1.8 2.9 177 chr2L 9441304 intron numb + chr2L 9441392 intron numb + chr2L 9441481 intron numb + chr2L_8_9440001 chr2L_9440001 RAL-908 229 chr2L 9451030 9451066 chr2L 9451153 9451180 7 118 0.0 3.0 1.5 2.8 150 chr2L 9451030 intron numb + chr2L 9451105 intron numb + chr2L 9451180 intron numb + chr2L_7_9450001 chr2L_9450001 RAL-908 230 chr2L 9454957 9455006 chr2L 9455079 9455128 13 121 4.0 3.5 3.8 2.7 171 chr2L 9454957 intron numb + chr2L 9455042 intron numb + chr2L 9455128 intron numb + chr2L_13_9455001 chr2L_9455001 RAL-908 231 chr2L 9456917 9456959 chr2L 9457018 9457054 15 100 3.0 3.0 3.0 3.8 137 chr2L 9456917 intron numb + chr2L 9456986 intron numb + chr2L 9457054 intron numb + chr2L_15_9455001 chr2L_9455001 RAL-908 232 chr2L 9463749 9463769 chr2L 9463854 9463874 7 105 13.0 14.5 13.8 0.5 125 chr2L 9463749 intergenic not near genes chr2L 9463812 intergenic not near genes chr2L 9463874 intergenic not near genes chr2L_7_9460001 chr2L_9460001 RAL-908 233 chr2L 9474765 9474809 chr2L 9474879 9474923 11 114 4.5 5.0 4.8 1.9 158 chr2L 9474765 intergenic not near genes chr2L 9474844 intergenic not near genes chr2L 9474923 intergenic not near genes chr2L_11_9470001 chr2L_9470001 RAL-908 234 chr2L 9490500 9490552 chr2L 9490600 9490652 14 98 0.5 3.5 2.0 4.7 152 chr2L 9490500 intergenic not near genes chr2L 9490576 intergenic not near genes chr2L 9490652 intergenic not near genes chr2L_14_9490001 chr2L_9490001 RAL-908 235 chr2L 9619484 9619522 chr2L 9619841 9619879 11 356 1.5 3.0 2.2 3.4 395 chr2L 9619484 intron GlcAT-S + chr2L 9619682 intron GlcAT-S + chr2L 9619879 intron GlcAT-S + chr2L_11_9615001 chr2L_9615001 RAL-908 236 chr2L 9716430 9716477 chr2L 9716538 9716585 14 108 5.5 1.5 3.5 3.1 155 chr2L 9716430 3` UTR Nckx30C - chr2L 9716508 3` UTR Nckx30C - chr2L 9716585 3` UTR Nckx30C - chr2L_14_9715001 chr2L_9715001 RAL-908 237 chr2L 9719753 9719769 chr2L 9719857 9719873 7 103 0.0 1.0 0.5 4.7 120 chr2L 9719753 intron Nckx30C - chr2L 9719813 intron Nckx30C - chr2L 9719873 intron Nckx30C - chr2L_7_9715001 chr2L_9715001 RAL-908 238 chr2L 9730964 9731002 chr2L 9731057 9731105 14 101 3.0 3.0 3.0 3.5 141 chr2L 9730964 intron Nckx30C - chr2L 9731034 intron Nckx30C - chr2L 9731105 intron Nckx30C - chr2L_14_9730001 chr2L_9730001 RAL-908 239 chr2L 9837425 9837447 chr2L 9837523 9837545 6 98 1.5 4.5 3.0 1.5 120 chr2L 9837425 intron nAChRalpha6 - chr2L 9837485 intron nAChRalpha6 - chr2L 9837545 intron nAChRalpha6 - chr2L_6_9835001 chr2L_9835001 RAL-908 240 chr2L 9843203 9843208 chr2L 9843304 9843308 4 101 0.5 0.5 0.5 2.7 105 chr2L 9843203 intron nAChRalpha6 - chr2L 9843256 intron nAChRalpha6 - chr2L 9843308 intron nAChRalpha6 - chr2L_4_9840001 chr2L_9840001 RAL-908 241 chr2L 9861598 9861648 chr2L 9861805 9861839 7 202 3.0 4.5 3.8 1.5 241 chr2L 9861598 intron nAChRalpha6 - chr2L 9861718 intron nAChRalpha6 - chr2L 9861839 intron nAChRalpha6 - chr2L_7_9860001 chr2L_9860001 RAL-908 242 chr2L 9862343 9862358 chr2L 9862471 9862486 6 128 0.0 8.0 4.0 1.2 143 chr2L 9862343 intron nAChRalpha6 - chr2L 9862414 intron nAChRalpha6 - chr2L 9862486 intron nAChRalpha6 - chr2L_6_9860001 chr2L_9860001 RAL-908 243 chr2L 9880988 9881038 chr2L 9881086 9881131 16 97 6.5 4.0 5.2 2.6 143 chr2L 9880988 intron nAChRalpha6 - chr2L 9881060 intron nAChRalpha6 - chr2L 9881131 intron nAChRalpha6 - chr2L_16_9880001 chr2L_9880001 RAL-908 244 chr2L 9973713 9973757 chr2L 9980851 9980896 HMS-Beagle 8 7132 1.5 6.0 3.8 1.7 7183 chr2L 9973713 intergenic not near genes chr2L 9977304 intergenic not near genes chr2L 9980896 intergenic not near genes chr2L_8_9975001 chr2L_9975001 RAL-908 245 chr2L 10051716 10051749 chr2L 10051821 10051854 4 101 3.0 3.0 3.0 1.0 138 chr2L 10051716 5` UTR CR44874 + chr2L 10051785 5` UTR CR44874 + chr2L 10051854 5` UTR CR44874 + chr2L_4_10050001 chr2L_10050001 RAL-908 246 chr2L 10095614 10095659 chr2L 10095714 10095759 16 100 7.0 2.0 4.5 2.9 145 chr2L 10095614 intron CG44153 - chr2L 10095686 intron CG44153 - chr2L 10095759 intron CG44153 - chr2L_16_10095001 chr2L_10095001 RAL-908 247 chr2L 10103358 10103397 chr2L 10103478 10103511 7 119 3.5 0.5 2.0 2.3 153 chr2L 10103358 intron,intron CG44153 -,CG34109 + chr2L 10103434 intron,intron CG44153 -,CG34109 + chr2L 10103511 intron,intron CG44153 -,CG34109 + chr2L_7_10100001 chr2L_10100001 RAL-908 248 chr2L 10105269 10105309 chr2L 10105365 10105402 5 95 2.0 4.5 3.2 1.2 133 chr2L 10105269 intron,intron CG44153 -,CG34109 + chr2L 10105336 intron,intron CG44153 -,CG34109 + chr2L 10105402 intron,intron CG44153 -,CG34109 + chr2L_5_10105001 chr2L_10105001 RAL-908 249 chr2L 10138172 10138186 chr2L 10143438 10143444 Rt1c 4 5264 5.0 4.5 4.8 0.7 5272 chr2L 10138172 intron CG44153 - chr2L 10140808 intron CG44153 - chr2L 10143444 intron CG44153 - chr2L_4_10140001 chr2L_10140001 RAL-908 250 chr2L 10156304 10156349 chr2L 10163794 10163839 blood 6 7489 4.5 4.0 4.2 1.2 7535 chr2L 10156304 intron,3` UTR CG44153 -,CG4839 + chr2L 10160072 intron CG44153 - chr2L 10163839 intron CG44153 - chr2L_6_10160001 chr2L_10160001 RAL-908 251 chr2L 10176023 10176024 chr2L 16071771 16071771 9 5895747 15.5 14.0 14.8 0.6 5895748 chr2L 10176023 intron CG44153 - chr2L 13123897 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_9_13120001 chr2L_13120001 RAL-908 252 chr2L 10204489 10204533 chr2L 10204592 10204636 24 103 4.5 5.5 5.0 4.0 147 chr2L 10204489 intergenic CG34159 -,CG5734 - chr2L 10204562 intergenic CG5734 -,CG34159 - chr2L 10204636 intergenic CG5734 -,CG34159 - chr2L_24_10200001 chr2L_10200001 RAL-908 253 chr2L 10226005 10226013 chr2L 10226266 10226277 5 262 27.0 28.0 27.5 0.2 272 chr2L 10226005 intron CG5708 - chr2L 10226141 intron CG5708 - chr2L 10226277 intron CG5708 - chr2L_5_10225001 chr2L_10225001 RAL-908 254 chr2L 10336042 10336089 chr2L 10336160 10336202 9 117 2.0 4.5 3.2 2.1 160 chr2L 10336042 exon GATAd + chr2L 10336122 exon GATAd + chr2L 10336202 exon GATAd + chr2L_9_10335001 chr2L_10335001 RAL-908 255 chr2L 10348371 10348403 chr2L 10348474 10348506 6 103 5.5 0.0 2.8 1.6 135 chr2L 10348371 intron CG34367 - chr2L 10348438 intron CG34367 - chr2L 10348506 intron CG34367 - chr2L_6_10345001 chr2L_10345001 RAL-908 256 chr2L 10458085 10458102 chr2L 10458366 10458383 4 281 3.0 0.5 1.8 1.4 298 chr2L 10458085 intron LM408 + chr2L 10458234 intron LM408 + chr2L 10458383 intron LM408 + chr2L_4_10455001 chr2L_10455001 RAL-908 257 chr2L 10519504 10519524 chr2L 10519765 10519787 7 267 0.5 1.5 1.0 3.5 283 chr2L 10519504 intergenic Lrr47 + chr2L 10519646 intergenic Lrr47 + chr2L 10519787 intergenic not near genes chr2L_7_10515001 chr2L_10515001 RAL-908 258 chr2L 10563893 10563939 chr2L 10564003 10564052 12 113 1.0 3.0 2.0 4.0 159 chr2L 10563893 intron Trim9 + chr2L 10563972 intron Trim9 + chr2L 10564052 intron Trim9 + chr2L_12_10560001 chr2L_10560001 RAL-908 259 chr2L 10592821 10592870 chr2L 10600502 10600552 opus 11 7682 1.0 4.5 2.8 2.9 7731 chr2L 10592821 intron Trim9 + chr2L 10596686 intron Trim9 + chr2L 10600552 intron Trim9 + chr2L_11_10595001 chr2L_10595001 RAL-908 260 chr2L 10604197 10604221 chr2L 10604299 10604323 7 102 4.0 6.0 5.0 1.2 126 chr2L 10604197 intron Trim9 + chr2L 10604260 intron Trim9 + chr2L 10604323 intron Trim9 + chr2L_7_10600001 chr2L_10600001 RAL-908 261 chr2L 10640647 10640667 chr2L 10640727 10640776 4 101 4.0 2.0 3.0 1.0 129 chr2L 10640647 exon CG31872 + chr2L 10640712 exon CG31872 + chr2L 10640776 exon CG31872 + chr2L_4_10640001 chr2L_10640001 RAL-908 262 chr2L 10673722 10673769 chr2L 10673824 10673871 13 101 4.5 7.0 5.8 1.9 149 chr2L 10673722 intergenic not near genes chr2L 10673796 intergenic not near genes chr2L 10673871 intergenic not near genes chr2L_13_10670001 chr2L_10670001 RAL-908 263 chr2L 10685578 10685622 chr2L 10685681 10685725 13 102 2.0 3.0 2.5 3.7 147 chr2L 10685578 intergenic not near genes chr2L 10685652 intergenic CG7296 - chr2L 10685725 intergenic CG7296 - chr2L_13_10685001 chr2L_10685001 RAL-908 264 chr2L 10786793 10786840 chr2L 10786967 10787016 8 174 4.0 0.0 2.0 2.7 223 chr2L 10786793 intron CG31869 - chr2L 10786904 intron CG31869 - chr2L 10787016 intron CG31869 - chr2L_8_10785001 chr2L_10785001 RAL-908 265 chr2L 10836741 10836781 chr2L 10836840 10836879 6 98 6.0 7.5 6.8 0.8 138 chr2L 10836741 intron Nos - chr2L 10836810 intron Nos - chr2L 10836879 intron Nos - chr2L_6_10835001 chr2L_10835001 RAL-908 266 chr2L 10862831 10862862 chr2L 10864465 10864475 Rt1c 5 1630 3.5 2.0 2.8 1.3 1644 chr2L 10862831 3` UTR CR43807 - chr2L 10863653 intron CR43807 - chr2L 10864475 3` UTR CR43807 - chr2L_5_10860001 chr2L_10860001 RAL-908 267 chr2L 10876555 10876570 chr2L 10883633 10883648 297 6 7078 4.0 6.5 5.2 1.0 7093 chr2L 10876555 intergenic not near genes chr2L 10880102 intergenic not near genes chr2L 10883648 intergenic not near genes chr2L_6_10880001 chr2L_10880001 RAL-908 268 chr2L 10891472 10891516 chr2L 10891606 10891650 10 130 6.0 4.5 5.2 1.6 178 chr2L 10891472 intergenic not near genes chr2L 10891561 intergenic not near genes chr2L 10891650 intergenic not near genes chr2L_10_10890001 chr2L_10890001 RAL-908 269 chr2L 10912969 10912998 chr2L 10913068 10913097 9 97 3.0 2.5 2.8 2.4 128 chr2L 10912969 intergenic not near genes chr2L 10913033 intergenic not near genes chr2L 10913097 intergenic not near genes chr2L_9_10910001 chr2L_10910001 RAL-908 270 chr2L 10946965 10946975 chr2L 10956159 10956210 roo 5 9224 1.0 2.0 1.5 2.0 9245 chr2L 10946965 intron dpr2 - chr2L 10951588 intron dpr2 - chr2L 10956210 intron dpr2 - chr2L_5_10950001 chr2L_10950001 RAL-908 271 chr2L 11142492 11142543 chr2L 11142594 11142645 19 101 3.5 3.5 3.5 4.2 153 chr2L 11142492 intron Gyc32E - chr2L 11142568 intron Gyc32E - chr2L 11142645 intron Gyc32E - chr2L_19_11140001 chr2L_11140001 RAL-908 272 chr2L 11145686 11145734 chr2L 11145844 11145892 14 155 4.5 7.5 6.0 2.0 206 chr2L 11145686 intron Gyc32E - chr2L 11145789 intron Gyc32E - chr2L 11145892 intron Gyc32E - chr2L_14_11145001 chr2L_11145001 RAL-908 273 chr2L 11150052 11150104 chr2L 11150149 11150201 16 92 3.0 5.5 4.2 3.1 149 chr2L 11150052 intergenic not near genes chr2L 11150126 intergenic not near genes chr2L 11150201 intergenic not near genes chr2L_16_11150001 chr2L_11150001 RAL-908 274 chr2L 11224038 11224082 chr2L 11224169 11224213 13 131 2.5 3.5 3.0 3.2 175 chr2L 11224038 intron ab + chr2L 11224126 intron ab + chr2L 11224213 intron ab + chr2L_13_11220001 chr2L_11220001 RAL-908 275 chr2L 11292368 11292406 chr2L 11292464 11292508 12 100 3.0 7.5 5.2 1.9 140 chr2L 11292368 intergenic not near genes chr2L 11292438 intergenic not near genes chr2L 11292508 intergenic not near genes chr2L_12_11290001 chr2L_11290001 RAL-908 276 chr2L 11315257 11315270 chr2L 11317681 11317684 G2 4 2420 1.5 3.5 2.5 1.1 2427 chr2L 11315257 intergenic not near genes chr2L 11316470 intergenic not near genes chr2L 11317684 intergenic not near genes chr2L_4_11315001 chr2L_11315001 RAL-908 277 chr2L 11357959 11358011 chr2L 11358057 11358109 16 96 3.5 2.5 3.0 4.0 150 chr2L 11357959 intergenic not near genes chr2L 11358034 intergenic not near genes chr2L 11358109 intergenic not near genes chr2L_16_11355001 chr2L_11355001 RAL-908 278 chr2L 11380621 11380644 chr2L 11380705 11380741 4 94 0.0 6.5 3.2 1.0 120 chr2L 11380621 intergenic not near genes chr2L 11380681 intergenic not near genes chr2L 11380741 intergenic not near genes chr2L_4_11380001 chr2L_11380001 RAL-908 279 chr2L 11394485 11394517 chr2L 11394578 11394614 12 98 2.0 3.0 2.5 3.4 129 chr2L 11394485 intergenic not near genes chr2L 11394550 intergenic not near genes chr2L 11394614 intergenic not near genes chr2L_12_11390001 chr2L_11390001 RAL-908 280 chr2L 11418639 11418685 chr2L 11418738 11418784 6 99 1.0 3.5 2.2 1.9 145 chr2L 11418639 intergenic not near genes chr2L 11418712 intergenic not near genes chr2L 11418784 intergenic not near genes chr2L_6_11415001 chr2L_11415001 RAL-908 281 chr2L 11444239 11444283 chr2L 11444339 11444383 11 95 5.0 2.0 3.5 2.4 144 chr2L 11444239 intron salm - chr2L 11444311 intron salm - chr2L 11444383 intron salm - chr2L_11_11440001 chr2L_11440001 RAL-908 282 chr2L 11458933 11458976 chr2L 11459069 11459112 17 136 3.5 2.5 3.0 4.2 179 chr2L 11458933 intergenic not near genes chr2L 11459022 intergenic not near genes chr2L 11459112 intergenic not near genes chr2L_17_11455001 chr2L_11455001 RAL-908 283 chr2L 11467965 11468008 chr2L 11468278 11468306 15 311 5.5 2.5 4.0 3.0 341 chr2L 11467965 intergenic not near genes chr2L 11468136 intergenic not near genes chr2L 11468306 intergenic not near genes chr2L_15_11465001 chr2L_11465001 RAL-908 284 chr2L 11536693 11536706 chr2L 11536794 11536807 8 100 1.5 0.0 0.8 4.4 114 chr2L 11536693 exon CG43438 + chr2L 11536750 3` UTR CG43438 + chr2L 11536807 3` UTR CG43438 + chr2L_8_11535001 chr2L_11535001 RAL-908 285 chr2L 11537960 11537982 chr2L 11538073 11538095 5 113 6.5 1.0 3.8 1.0 135 chr2L 11537960 intergenic not near genes chr2L 11538028 intergenic not near genes chr2L 11538095 intergenic not near genes chr2L_5_11535001 chr2L_11535001 RAL-908 286 chr2L 11540558 11540616 chr2L 11547983 11548038 Tabor 14 7423 3.5 6.0 4.8 2.4 7480 chr2L 11540558 intergenic not near genes chr2L 11544298 intergenic not near genes chr2L 11548038 intergenic not near genes chr2L_14_11540001 chr2L_11540001 RAL-908 287 chr2L 11563623 11563633 chr2L 11568847 11568857 copia 7 5223 5.0 7.0 6.0 1.0 5234 chr2L 11563623 intergenic not near genes chr2L 11566240 intergenic not near genes chr2L 11568857 intergenic not near genes chr2L_7_11565001 chr2L_11565001 RAL-908 288 chr2L 11563634 11563658 chr2L 11568842 11568870 copia 14 5221 3.0 7.0 5.0 2.3 5236 chr2L 11563634 intergenic not near genes chr2L 11566252 intergenic not near genes chr2L 11568870 intergenic not near genes chr2L_14_11565001 chr2L_11565001 RAL-908 289 chr2L 11595969 11596015 chr2L 11596090 11596132 11 120 1.5 3.5 2.5 3.1 163 chr2L 11595969 intron kek2 + chr2L 11596050 intron kek2 + chr2L 11596132 intron kek2 + chr2L_11_11595001 chr2L_11595001 RAL-908 290 chr2L 11610522 11610575 chr2L 11610621 11610673 8 98 5.0 3.0 4.0 1.6 151 chr2L 11610522 intron,3` UTR kek2 +,spag4 - chr2L 11610598 intron,3` UTR kek2 +,spag4 - chr2L 11610673 intron,exon kek2 +,spag4 - chr2L_8_11610001 chr2L_11610001 RAL-908 291 chr2L 11615890 11615922 chr2L 11615999 11616031 9 109 4.0 2.5 3.2 2.1 141 chr2L 11615890 intron kek2 + chr2L 11615960 intron kek2 + chr2L 11616031 intron kek2 + chr2L_9_11615001 chr2L_11615001 RAL-908 292 chr2L 11672116 11672164 chr2L 11672243 11672291 18 125 2.0 4.0 3.0 4.5 175 chr2L 11672116 intergenic not near genes chr2L 11672204 intergenic not near genes chr2L 11672291 intergenic not near genes chr2L_18_11670001 chr2L_11670001 RAL-908 293 chr2L 11676310 11676320 chr2L 11676417 11676428 4 108 0.0 0.0 0.0 4.0 118 chr2L 11676310 intergenic not near genes chr2L 11676369 intergenic not near genes chr2L 11676428 intergenic not near genes chr2L_4_11675001 chr2L_11675001 RAL-908 294 chr2L 11713495 11713529 chr2L 11720976 11721017 blood 4 7486 2.0 2.5 2.2 1.2 7522 chr2L 11713495 intergenic not near genes chr2L 11717256 intergenic not near genes chr2L 11721017 intergenic CR44143 + chr2L_4_11715001 chr2L_11715001 RAL-908 295 chr2L 11770583 11770627 chr2L 11770690 11770734 7 107 2.0 2.5 2.2 2.2 151 chr2L 11770583 intergenic not near genes chr2L 11770658 intergenic not near genes chr2L 11770734 intergenic not near genes chr2L_7_11770001 chr2L_11770001 RAL-908 296 chr2L 11781016 11781194 chr2L 11781119 11781290 10 98 0.5 0.0 0.2 8.3 274 chr2L 11781016 intergenic not near genes chr2L 11781153 intergenic not near genes chr2L 11781290 intergenic not near genes chr2L_10_11780001 chr2L_11780001 RAL-908 297 chr2L 11820427 11820462 chr2L 11820528 11820558 12 100 1.0 6.5 3.8 2.5 131 chr2L 11820427 intron Pde1c - chr2L 11820492 intron Pde1c - chr2L 11820558 intron Pde1c - chr2L_12_11820001 chr2L_11820001 RAL-908 298 chr2L 11825686 11825702 chr2L 11825785 11825793 4 97 9.0 0.0 4.5 0.7 107 chr2L 11825686 intron Pde1c - chr2L 11825740 intron Pde1c - chr2L 11825793 intron Pde1c - chr2L_4_11825001 chr2L_11825001 RAL-908 299 chr2L 11841348 11841395 chr2L 11841446 11841493 12 98 6.0 2.0 4.0 2.4 145 chr2L 11841348 intron Pde1c - chr2L 11841420 intron Pde1c - chr2L 11841493 intron Pde1c - chr2L_12_11840001 chr2L_11840001 RAL-908 300 chr2L 11892527 11892551 chr2L 11892636 11892660 7 109 2.0 3.0 2.5 2.0 133 chr2L 11892527 intron Pde1c - chr2L 11892594 intron Pde1c - chr2L 11892660 intron Pde1c - chr2L_7_11890001 chr2L_11890001 RAL-908 301 chr2L 11904385 11904434 chr2L 11906591 11906640 8 2206 19.5 3.5 11.5 0.6 2255 chr2L 11904385 intron Pde1c - chr2L 11905512 intron Pde1c - chr2L 11906640 intron Pde1c - chr2L_8_11905001 chr2L_11905001 RAL-908 302 chr2L 11903968 11904012 chr2L 11906694 11906727 13 2718 35.5 16.5 26.0 0.5 2759 chr2L 11903968 intron Pde1c - chr2L 11905348 intron Pde1c - chr2L 11906727 intron Pde1c - chr2L_13_11905001 chr2L_11905001 RAL-908 303 chr2L 12031374 12031419 chr2L 12031475 12031520 18 101 3.5 4.5 4.0 3.6 146 chr2L 12031374 intron dmGlut + chr2L 12031447 intron dmGlut + chr2L 12031520 intron dmGlut + chr2L_18_12030001 chr2L_12030001 RAL-908 304 chr2L 12067310 12067351 chr2L 12074382 12074423 297 17 7072 5.5 1.5 3.5 3.8 7113 chr2L 12067310 intergenic not near genes chr2L 12070866 intergenic not near genes chr2L 12074423 intergenic not near genes chr2L_17_12070001 chr2L_12070001 RAL-908 305 chr2L 12132703 12132747 chr2L 12132809 12132853 19 106 1.0 4.5 2.8 5.0 150 chr2L 12132703 intron rho-6 - chr2L 12132778 intron rho-6 - chr2L 12132853 intron rho-6 - chr2L_19_12130001 chr2L_12130001 RAL-908 306 chr2L 12169532 12169574 chr2L 12169632 12169674 14 100 5.5 0.5 3.0 3.5 142 chr2L 12169532 3` UTR CG31760 + chr2L 12169603 3` UTR CG31760 + chr2L 12169674 3` UTR CG31760 + chr2L_14_12165001 chr2L_12165001 RAL-908 307 chr2L 12180818 12180872 chr2L 12180940 12180989 8 112 2.0 3.0 2.5 2.3 171 chr2L 12180818 intron aret + chr2L 12180904 intron aret + chr2L 12180989 intron aret + chr2L_8_12180001 chr2L_12180001 RAL-908 308 chr2L 12234017 12234056 chr2L 12234130 12234171 9 114 4.5 5.5 5.0 1.5 154 chr2L 12234017 intron aret + chr2L 12234094 intron aret + chr2L 12234171 intron aret + chr2L_9_12230001 chr2L_12230001 RAL-908 309 chr2L 12254022 12254032 chr2L 12254134 12254144 5 112 7.0 0.0 3.5 1.1 122 chr2L 12254022 intron aret + chr2L 12254083 intron aret + chr2L 12254144 intron aret + chr2L_5_12250001 chr2L_12250001 RAL-908 310 chr2L 12278914 12278958 chr2L 12279014 12279058 10 100 1.5 4.5 3.0 2.5 144 chr2L 12278914 exon aret + chr2L 12278986 intron aret + chr2L 12279058 intron aret + chr2L_10_12275001 chr2L_12275001 RAL-908 311 chr2L 12284028 12284066 chr2L 12284138 12284174 8 110 4.0 2.0 3.0 2.0 146 chr2L 12284028 intron aret + chr2L 12284101 intron aret + chr2L 12284174 intron aret + chr2L_8_12280001 chr2L_12280001 RAL-908 312 chr2L 12373085 12373085 chr2L 15974279 15974279 5 3601194 13.0 16.5 14.8 0.3 3601194 chr2L 12373085 intron bru-2 + chr2L 14173682 intron CG43333 - chr2L 15974279 intergenic not near genes chr2L_5_14170001 chr2L_14170001 RAL-908 313 chr2L 12394944 12394999 chr2L 12395058 12395131 10 130 3.0 0.0 1.5 4.0 187 chr2L 12394944 intron bru-2 + chr2L 12395038 intron bru-2 + chr2L 12395131 intron bru-2 + chr2L_10_12395001 chr2L_12395001 RAL-908 314 chr2L 12410991 12411038 chr2L 12411088 12411137 12 98 1.5 0.0 0.8 6.7 146 chr2L 12410991 intron vir-1 - chr2L 12411064 intron vir-1 - chr2L 12411137 intron vir-1 - chr2L_12_12410001 chr2L_12410001 RAL-908 315 chr2L 12424349 12424380 chr2L 12424445 12424476 16 94 0.0 12.5 6.2 2.2 127 chr2L 12424349 intergenic not near genes chr2L 12424412 intergenic CG6405 + chr2L 12424476 intergenic CG6405 + chr2L_16_12420001 chr2L_12420001 RAL-908 316 chr2L 12426115 12426124 chr2L 12426217 12426222 4 102 4.0 3.0 3.5 0.9 107 chr2L 12426115 exon CG6405 + chr2L 12426168 exon CG6405 + chr2L 12426222 exon CG6405 + chr2L_4_12425001 chr2L_12425001 RAL-908 317 chr2L 12426128 12426154 chr2L 12426216 12426257 8 96 3.0 3.0 3.0 2.0 129 chr2L 12426128 exon CG6405 + chr2L 12426192 exon CG6405 + chr2L 12426257 exon CG6405 + chr2L_8_12425001 chr2L_12425001 RAL-908 318 chr2L 12487873 12487910 chr2L 12487974 12488001 10 99 3.5 6.0 4.8 1.7 128 chr2L 12487873 intron bun - chr2L 12487937 intron bun - chr2L 12488001 intron bun - chr2L_10_12485001 chr2L_12485001 RAL-908 319 chr2L 12507263 12507294 chr2L 12507371 12507403 11 109 6.5 4.0 5.2 1.8 140 chr2L 12507263 intron bun - chr2L 12507333 intron bun - chr2L 12507403 intron bun - chr2L_11_12505001 chr2L_12505001 RAL-908 320 chr2L 12529225 12529448 chr2L 12529378 12529494 23 128 0.5 0.0 0.2 19.2 269 chr2L 12529225 intron bun - chr2L 12529360 intron bun - chr2L 12529494 intron bun - chr2L_23_12525001 chr2L_12525001 RAL-908 321 chr2L 12558327 12558350 chr2L 12565468 12565499 HMS-Beagle 8 7148 4.0 7.0 5.5 1.2 7172 chr2L 12558327 intergenic not near genes chr2L 12561913 intergenic not near genes chr2L 12565499 intergenic not near genes chr2L_8_12560001 chr2L_12560001 RAL-908 322 chr2L 12572474 12572484 chr2L 12572575 12572585 6 101 7.0 1.0 4.0 1.2 111 chr2L 12572474 intergenic not near genes chr2L 12572530 intergenic not near genes chr2L 12572585 intergenic not near genes chr2L_6_12570001 chr2L_12570001 RAL-908 323 chr2L 12572503 12572525 chr2L 12572574 12572626 12 96 5.0 1.0 3.0 3.0 123 chr2L 12572503 intergenic not near genes chr2L 12572564 intergenic not near genes chr2L 12572626 intergenic not near genes chr2L_12_12570001 chr2L_12570001 RAL-908 324 chr2L 12625145 12625184 chr2L 12625258 12625297 11 110 2.0 5.5 3.8 2.3 152 chr2L 12625145 intron,intron nub +,Ref2 - chr2L 12625221 intron,intron nub +,Ref2 - chr2L 12625297 intron,intron nub +,Ref2 - chr2L_11_12625001 chr2L_12625001 RAL-908 325 chr2L 12647573 12647616 chr2L 12647709 12647752 13 134 1.0 3.0 2.0 4.3 179 chr2L 12647573 intergenic not near genes chr2L 12647662 intergenic not near genes chr2L 12647752 intergenic not near genes chr2L_13_12645001 chr2L_12645001 RAL-908 326 chr2L 12682859 12682899 chr2L 12682958 12682967 9 93 2.5 3.0 2.8 2.4 108 chr2L 12682859 intron pdm2 + chr2L 12682913 intron pdm2 + chr2L 12682967 intron pdm2 + chr2L_9_12680001 chr2L_12680001 RAL-908 327 chr2L 12731042 12731088 chr2L 12735829 12735875 F-element 8 4787 2.0 6.0 4.0 1.6 4833 chr2L 12731042 intron MRP + chr2L 12733458 intron MRP + chr2L 12735875 intron MRP + chr2L_8_12730001 chr2L_12730001 RAL-908 328 chr2L 12739163 12739167 chr2L 12743964 12743968 Doc 6 4801 2.5 5.0 3.8 1.2 4805 chr2L 12739163 exon MRP + chr2L 12741566 intron MRP + chr2L 12743968 intron MRP + chr2L_6_12740001 chr2L_12740001 RAL-908 329 chr2L 12739177 12739196 chr2L 12743958 12743997 Doc 4 4791 1.0 4.5 2.8 1.1 4820 chr2L 12739177 exon MRP + chr2L 12741587 intron MRP + chr2L 12743997 exon MRP + chr2L_4_12740001 chr2L_12740001 RAL-908 330 chr2L 12755188 12755214 chr2L 12755288 12755296 4 95 5.0 5.0 5.0 0.7 108 chr2L 12755188 intergenic not near genes chr2L 12755242 intergenic not near genes chr2L 12755296 intergenic not near genes chr2L_4_12755001 chr2L_12755001 RAL-908 331 chr2L 12779725 12779771 chr2L 12780202 12780226 15 475 4.0 4.0 4.0 3.0 501 chr2L 12779725 intergenic not near genes chr2L 12779976 intergenic not near genes chr2L 12780226 intergenic not near genes chr2L_15_12775001 chr2L_12775001 RAL-908 332 chr2L 12781786 12781806 chr2L 12789249 12789269 Quasimodo 7 7463 4.5 5.5 5.0 1.2 7483 chr2L 12781786 intergenic not near genes chr2L 12785528 intergenic not near genes chr2L 12789269 intergenic not near genes chr2L_7_12785001 chr2L_12785001 RAL-908 333 chr2L 12791598 12791610 chr2L 12795293 12795305 F-element 4 3695 3.5 5.0 4.2 0.8 3707 chr2L 12791598 intergenic not near genes chr2L 12793452 intergenic not near genes chr2L 12795305 intergenic not near genes chr2L_4_12790001 chr2L_12790001 RAL-908 334 chr2L 12791612 12791620 chr2L 12795287 12795315 F-element 4 3686 3.0 4.0 3.5 0.9 3703 chr2L 12791612 intergenic not near genes chr2L 12793464 intergenic not near genes chr2L 12795315 intergenic not near genes chr2L_4_12790001 chr2L_12790001 RAL-908 335 chr2L 12791624 12791626 chr2L 12795278 12795321 F-element 4 3674 3.0 4.0 3.5 0.9 3697 chr2L 12791624 intergenic not near genes chr2L 12793472 intergenic not near genes chr2L 12795321 intergenic not near genes chr2L_4_12790001 chr2L_12790001 RAL-908 336 chr2L 12812315 12812359 chr2L 12812457 12812497 11 136 3.5 6.0 4.8 1.9 182 chr2L 12812315 intergenic not near genes chr2L 12812406 intergenic not near genes chr2L 12812497 intergenic not near genes chr2L_11_12810001 chr2L_12810001 RAL-908 337 chr2L 12855291 12855319 chr2L 12855395 12855424 10 105 0.0 1.0 0.5 6.7 133 chr2L 12855291 intergenic not near genes chr2L 12855358 intergenic not near genes chr2L 12855424 intergenic not near genes chr2L_10_12855001 chr2L_12855001 RAL-908 338 chr2L 12861685 12861724 chr2L 12863164 12863211 hobo 14 1482 3.0 5.0 4.0 2.8 1526 chr2L 12861685 intergenic not near genes chr2L 12862448 intergenic not near genes chr2L 12863211 intergenic not near genes chr2L_14_12860001 chr2L_12860001 RAL-908 339 chr2L 12889019 12889059 chr2L 12889121 12889154 8 102 3.5 2.5 3.0 2.0 135 chr2L 12889019 intergenic not near genes chr2L 12889086 intergenic not near genes chr2L 12889154 intergenic not near genes chr2L_8_12885001 chr2L_12885001 RAL-908 340 chr2L 12894006 12894053 chr2L 12895493 12895540 hobo 6 1477 6.0 4.0 5.0 1.0 1534 chr2L 12894006 intergenic not near genes chr2L 12894773 intergenic not near genes chr2L 12895540 intergenic not near genes chr2L_6_12890001 chr2L_12890001 RAL-908 341 chr2L 12933850 12933880 chr2L 12941317 12941367 blood 10 7479 1.5 2.0 1.8 3.6 7517 chr2L 12933850 intergenic not near genes chr2L 12937608 intergenic not near genes chr2L 12941367 intergenic not near genes chr2L_10_12935001 chr2L_12935001 RAL-908 342 chr2L 12945979 12946000 chr2L 12946078 12946100 4 100 2.0 4.0 3.0 1.0 121 chr2L 12945979 intergenic not near genes chr2L 12946040 intergenic not near genes chr2L 12946100 intergenic not near genes chr2L_4_12945001 chr2L_12945001 RAL-908 343 chr2L 12963789 12963824 chr2L 12963911 12963946 11 121 4.5 5.0 4.8 1.9 157 chr2L 12963789 intergenic not near genes chr2L 12963868 intergenic not near genes chr2L 12963946 intergenic not near genes chr2L_11_12960001 chr2L_12960001 RAL-908 344 chr2L 13154096 13154106 chr2L 13154194 13154204 5 98 7.5 0.5 4.0 1.0 108 chr2L 13154096 intergenic not near genes chr2L 13154150 intergenic not near genes chr2L 13154204 intergenic not near genes chr2L_5_13150001 chr2L_13150001 RAL-908 345 chr2L 13185323 13185352 chr2L 13185422 13185451 5 99 3.0 3.5 3.2 1.2 128 chr2L 13185323 3` UTR CG16974 - chr2L 13185387 3` UTR CG16974 - chr2L 13185451 exon CG16974 - chr2L_5_13185001 chr2L_13185001 RAL-908 346 chr2L 13255275 13255297 chr2L 13255438 13255460 6 162 0.0 4.0 2.0 2.0 185 chr2L 13255275 intron CG31728 + chr2L 13255368 intron CG31728 + chr2L 13255460 exon CG31728 + chr2L_6_13255001 chr2L_13255001 RAL-908 347 chr2L 13351800 13351846 chr2L 13351906 13351952 7 105 3.5 2.5 3.0 1.8 152 chr2L 13351800 exon CG9395 - chr2L 13351876 intron CG9395 - chr2L 13351952 exon CG9395 - chr2L_7_13350001 chr2L_13350001 RAL-908 348 chr2L 13405630 13405672 chr2L 13410447 13410489 Doc 14 4816 5.0 4.0 4.5 2.5 4859 chr2L 13405630 exon CG7110 + chr2L 13408060 intron CG7110 + chr2L 13410489 intron CG7110 + chr2L_14_13405001 chr2L_13405001 RAL-908 349 chr2L 13447473 13447515 chr2L 13447575 13447617 13 101 4.5 2.5 3.5 2.9 144 chr2L 13447473 intron CG42784 + chr2L 13447545 intron,3` UTR CG42784 +,Hsp60D - chr2L 13447617 intron,3` UTR CG42784 +,Hsp60D - chr2L_13_13445001 chr2L_13445001 RAL-908 350 chr2L 13481430 13481455 chr2L 13482057 13482082 jockey 6 627 8.5 2.0 5.2 1.0 652 chr2L 13481430 intron CG42784 + chr2L 13481756 intron CG42784 + chr2L 13482082 intron CG42784 + chr2L_6_13480001 chr2L_13480001 RAL-908 351 chr2L 13522270 13522285 chr2L 13527596 13527611 Transpac 7 5326 4.0 6.0 5.0 1.2 5341 chr2L 13522270 intron B4 - chr2L 13524940 intron B4 - chr2L 13527611 intron B4 - chr2L_7_13520001 chr2L_13520001 RAL-908 352 chr2L 13528690 13528714 chr2L 13528787 13528814 11 97 2.5 8.0 5.2 1.8 124 chr2L 13528690 intron B4 - chr2L 13528752 intron B4 - chr2L 13528814 intron B4 - chr2L_11_13525001 chr2L_13525001 RAL-908 353 chr2L 13560382 13560411 chr2L 13565223 13565252 F-element 15 4841 7.5 5.0 6.2 2.1 4870 chr2L 13560382 intron kuz + chr2L 13562817 intron kuz + chr2L 13565252 intron kuz + chr2L_15_13560001 chr2L_13560001 RAL-908 354 chr2L 13598997 13599019 chr2L 13599120 13599142 8 122 3.5 7.0 5.2 1.3 145 chr2L 13598997 intron kuz + chr2L 13599070 intron kuz + chr2L 13599142 intron kuz + chr2L_8_13595001 chr2L_13595001 RAL-908 355 chr2L 13713538 13713572 chr2L 13713634 13713668 10 96 5.0 0.0 2.5 2.9 130 chr2L 13713538 intron CG31814 - chr2L 13713603 intron CG31814 - chr2L 13713668 intron CG31814 - chr2L_10_13710001 chr2L_13710001 RAL-908 356 chr2L 13736978 13737007 chr2L 13737107 13737136 13 129 2.5 1.5 2.0 4.3 158 chr2L 13736978 3` UTR CG31813 + chr2L 13737057 intergenic CG31813 + chr2L 13737136 intergenic CG31813 + chr2L_13_13735001 chr2L_13735001 RAL-908 357 chr2L 13761795 13761821 chr2L 13762926 13762942 Doc 5 1129 6.0 5.0 5.5 0.8 1147 chr2L 13761795 intron TM9SF4 + chr2L 13762368 intron TM9SF4 + chr2L 13762942 intron TM9SF4 + chr2L_5_13760001 chr2L_13760001 RAL-908 358 chr2L 13853067 13853115 chr2L 13862236 13862285 roo 20 9169 3.0 0.5 1.8 7.1 9218 chr2L 13853067 intron CenG1A + chr2L 13857676 intron CenG1A + chr2L 13862285 intron CenG1A + chr2L_20_13855001 chr2L_13855001 RAL-908 359 chr2L 13917712 13917761 chr2L 13917833 13917882 15 121 2.0 3.5 2.8 3.9 170 chr2L 13917712 intron Ance-3 + chr2L 13917797 intron Ance-3 + chr2L 13917882 intron Ance-3 + chr2L_15_13915001 chr2L_13915001 RAL-908 360 chr2L 13929885 13929937 chr2L 13930206 13930252 8 318 1.0 3.0 2.0 2.7 367 chr2L 13929885 intron Ance-3 + chr2L 13930068 intron Ance-3 + chr2L 13930252 intron Ance-3 + chr2L_8_13930001 chr2L_13930001 RAL-908 361 chr2L 13966124 13966172 chr2L 13966871 13966919 10 746 3.5 2.0 2.8 2.6 795 chr2L 13966124 intron NimB2 - chr2L 13966522 exon NimB2 - chr2L 13966919 exon NimB2 - chr2L_10_13965001 chr2L_13965001 RAL-908 362 chr2L 13973632 13973687 chr2L 13973734 13973789 18 98 3.0 6.0 4.5 3.3 157 chr2L 13973632 3` UTR NimC1 - chr2L 13973710 3` UTR NimC1 - chr2L 13973789 3` UTR NimC1 - chr2L_18_13970001 chr2L_13970001 RAL-908 363 chr2L 13988260 13988300 chr2L 13988367 13988406 7 103 4.0 8.0 6.0 1.0 146 chr2L 13988260 intron rk - chr2L 13988333 intron rk - chr2L 13988406 intron rk - chr2L_7_13985001 chr2L_13985001 RAL-908 364 chr2L 14078768 14078822 chr2L 14078875 14078929 15 107 1.5 3.0 2.2 4.7 161 chr2L 14078768 intron nAChRalpha5 + chr2L 14078848 intron nAChRalpha5 + chr2L 14078929 intron nAChRalpha5 + chr2L_15_14075001 chr2L_14075001 RAL-908 365 chr2L 14160668 14160706 chr2L 14160773 14160812 14 105 3.5 2.5 3.0 3.5 144 chr2L 14160668 intergenic CG17341 +,CG43332 - chr2L 14160740 intergenic CG17341 +,CG43332 - chr2L 14160812 intergenic CG17341 +,CG43332 - chr2L_14_14160001 chr2L_14160001 RAL-908 366 chr2L 14180042 14180090 chr2L 14180138 14180186 14 96 2.0 3.0 2.5 4.0 144 chr2L 14180042 intron CG43333 - chr2L 14180114 intron CG43333 - chr2L 14180186 intron CG43333 - chr2L_14_14180001 chr2L_14180001 RAL-908 367 chr2L 14271121 14271149 chr2L 14271209 14271244 12 93 4.5 3.0 3.8 2.5 123 chr2L 14271121 intron wb + chr2L 14271182 intron wb + chr2L 14271244 intron wb + chr2L_12_14270001 chr2L_14270001 RAL-908 368 chr2L 14313182 14313214 chr2L 14313346 14313378 9 163 3.5 4.0 3.8 1.9 196 chr2L 14313182 intron wb + chr2L 14313280 intron wb + chr2L 14313378 intron wb + chr2L_9_14310001 chr2L_14310001 RAL-908 369 chr2L 14369119 14369131 chr2L 14369255 14369267 5 136 6.5 3.0 4.8 0.9 148 chr2L 14369119 intergenic not near genes chr2L 14369193 intergenic not near genes chr2L 14369267 intergenic not near genes chr2L_5_14365001 chr2L_14365001 RAL-908 370 chr2L 14369133 14369154 chr2L 14369253 14369290 7 130 4.5 3.0 3.8 1.5 157 chr2L 14369133 intergenic not near genes chr2L 14369212 intergenic not near genes chr2L 14369290 intergenic not near genes chr2L_7_14365001 chr2L_14365001 RAL-908 371 chr2L 14378024 14378061 chr2L 14378370 14378407 5 345 6.0 4.5 5.2 0.8 383 chr2L 14378024 intergenic ppk - chr2L 14378216 intergenic ppk - chr2L 14378407 3` UTR ppk - chr2L_5_14375001 chr2L_14375001 RAL-908 372 chr2L 14503421 14503427 chr2L 14503520 14503526 4 99 2.0 4.5 3.2 1.0 105 chr2L 14503421 intergenic not near genes chr2L 14503474 intergenic not near genes chr2L 14503526 intergenic not near genes chr2L_4_14500001 chr2L_14500001 RAL-908 373 chr2L 14588364 14588420 chr2L 14588538 14588594 21 172 3.5 4.0 3.8 4.4 230 chr2L 14588364 intergenic CG42680 - chr2L 14588479 intergenic CG42680 - chr2L 14588594 intergenic CG42680 - chr2L_21_14585001 chr2L_14585001 RAL-908 374 chr2L 14613262 14613294 chr2L 14613511 14613554 11 255 2.0 6.5 4.2 2.1 292 chr2L 14613262 intron,5` UTR osp -,CR43411 + chr2L 14613408 intron,5` UTR osp -,CR43411 + chr2L 14613554 intron,5` UTR osp -,CR43411 + chr2L_11_14610001 chr2L_14610001 RAL-908 375 chr2L 14642564 14642600 chr2L 14651747 14651783 roo 10 9182 3.5 6.0 4.8 1.7 9219 chr2L 14642564 intron osp - chr2L 14647174 intron osp - chr2L 14651783 intron osp - chr2L_10_14645001 chr2L_14645001 RAL-908 376 chr2L 14694233 14694285 chr2L 14694377 14694429 8 144 5.0 0.0 2.5 2.3 196 chr2L 14694233 intergenic not near genes chr2L 14694331 intergenic not near genes chr2L 14694429 intergenic not near genes chr2L_8_14690001 chr2L_14690001 RAL-908 377 chr2L 14707186 14707238 chr2L 14707325 14707358 12 137 2.0 0.0 1.0 6.0 172 chr2L 14707186 intergenic not near genes chr2L 14707272 intergenic not near genes chr2L 14707358 intergenic not near genes chr2L_12_14705001 chr2L_14705001 RAL-908 378 chr2L 14726561 14726578 chr2L 14726663 14726680 5 102 2.5 7.5 5.0 0.8 119 chr2L 14726561 intron CG42685 - chr2L 14726620 intron CG42685 - chr2L 14726680 intron CG42685 - chr2L_5_14725001 chr2L_14725001 RAL-908 379 chr2L 14768914 14768954 chr2L 14769012 14769052 9 95 0.5 3.5 2.0 3.0 138 chr2L 14768914 intergenic not near genes chr2L 14768983 intergenic not near genes chr2L 14769052 intergenic not near genes chr2L_9_14765001 chr2L_14765001 RAL-908 380 chr2L 14778799 14778827 chr2L 14779094 14779135 7 303 2.5 2.5 2.5 2.0 336 chr2L 14778799 intergenic not near genes chr2L 14778967 intergenic not near genes chr2L 14779135 intergenic not near genes chr2L_7_14775001 chr2L_14775001 RAL-908 381 chr2L 14803874 14803909 chr2L 14809097 14809132 copia 6 5223 5.0 7.0 6.0 0.9 5258 chr2L 14803874 intergenic not near genes chr2L 14806503 intergenic not near genes chr2L 14809132 intergenic not near genes chr2L_6_14805001 chr2L_14805001 RAL-908 382 chr2L 14816553 14816598 chr2L 14816677 14816722 8 123 0.5 4.5 2.5 2.3 169 chr2L 14816553 intergenic not near genes chr2L 14816638 intergenic not near genes chr2L 14816722 intergenic not near genes chr2L_8_14815001 chr2L_14815001 RAL-908 383 chr2L 14833773 14833822 chr2L 14833897 14833946 17 123 2.5 1.5 2.0 5.7 173 chr2L 14833773 intergenic not near genes chr2L 14833860 intergenic not near genes chr2L 14833946 intergenic not near genes chr2L_17_14830001 chr2L_14830001 RAL-908 384 chr2L 14839733 14839777 chr2L 14839829 14839873 15 96 3.0 3.0 3.0 3.8 140 chr2L 14839733 intergenic not near genes chr2L 14839803 intergenic not near genes chr2L 14839873 intergenic not near genes chr2L_15_14835001 chr2L_14835001 RAL-908 385 chr2L 14840979 14841008 chr2L 14841086 14841115 6 107 4.5 5.5 5.0 1.0 136 chr2L 14840979 3` UTR CR43805 - chr2L 14841047 3` UTR CR43805 - chr2L 14841115 3` UTR CR43805 - chr2L_6_14840001 chr2L_14840001 RAL-908 386 chr2L 14843502 14843509 chr2L 14843624 14843645 4 132 7.5 0.5 4.0 0.8 143 chr2L 14843502 intergenic CG42682 + chr2L 14843574 intergenic CG42682 + chr2L 14843645 intergenic not near genes chr2L_4_14840001 chr2L_14840001 RAL-908 387 chr2L 14857362 14857411 chr2L 14857593 14857642 10 231 5.0 2.5 3.8 2.1 280 chr2L 14857362 intergenic not near genes chr2L 14857502 intergenic not near genes chr2L 14857642 intergenic not near genes chr2L_10_14855001 chr2L_14855001 RAL-908 388 chr2L 14877760 14877784 chr2L 14877861 14877883 5 99 1.0 0.5 0.8 2.8 123 chr2L 14877760 intergenic not near genes chr2L 14877822 intergenic not near genes chr2L 14877883 intergenic not near genes chr2L_5_14875001 chr2L_14875001 RAL-908 389 chr2L 14877789 14877797 chr2L 14877854 14877893 6 93 1.0 0.5 0.8 3.3 104 chr2L 14877789 intergenic not near genes chr2L 14877841 intergenic not near genes chr2L 14877893 intergenic not near genes chr2L_6_14875001 chr2L_14875001 RAL-908 390 chr2L 14889942 14889979 chr2L 14890387 14890424 jockey 5 444 2.0 3.0 2.5 1.4 482 chr2L 14889942 intergenic not near genes chr2L 14890183 intergenic not near genes chr2L 14890424 intergenic not near genes chr2L_5_14890001 chr2L_14890001 RAL-908 391 chr2L 14905719 14905758 chr2L 14905836 14905875 7 117 3.0 0.0 1.5 2.8 156 chr2L 14905719 intergenic not near genes chr2L 14905797 intergenic not near genes chr2L 14905875 intergenic not near genes chr2L_7_14905001 chr2L_14905001 RAL-908 392 chr2L 14930334 14930355 chr2L 14930403 14930452 5 91 1.5 2.0 1.8 1.8 118 chr2L 14930334 intron,3` UTR CG42313 -,CG3491 + chr2L 14930393 intron,3` UTR CG42313 -,CG3491 + chr2L 14930452 intron,3` UTR CG42313 -,CG3491 + chr2L_5_14930001 chr2L_14930001 RAL-908 393 chr2L 14940142 14940166 chr2L 14940411 14940452 5 273 2.0 1.0 1.5 2.0 310 chr2L 14940142 intron CG42313 - chr2L 14940297 intron CG42313 - chr2L 14940452 intron CG42313 - chr2L_5_14940001 chr2L_14940001 RAL-908 394 chr2L 14984363 14984402 chr2L 14991985 14992024 opus 4 7619 5.5 3.5 4.5 0.7 7661 chr2L 14984363 intron mol - chr2L 14988194 intron mol - chr2L 14992024 intron mol - chr2L_4_14985001 chr2L_14985001 RAL-908 395 chr2L 15000866 15000882 chr2L 15000972 15001002 10 113 20.0 25.0 22.5 0.4 136 chr2L 15000866 intergenic not near genes chr2L 15000934 intergenic not near genes chr2L 15001002 intergenic not near genes chr2L_10_15000001 chr2L_15000001 RAL-908 396 chr2L 15003524 15003568 chr2L 15003628 15003672 10 103 3.0 4.0 3.5 2.2 148 chr2L 15003524 intergenic not near genes chr2L 15003598 intergenic not near genes chr2L 15003672 intergenic not near genes chr2L_10_15000001 chr2L_15000001 RAL-908 397 chr2L 15013139 15013180 chr2L 15013263 15013309 10 126 1.0 5.0 3.0 2.5 170 chr2L 15013139 intergenic CR43856 - chr2L 15013224 intergenic not near genes chr2L 15013309 intergenic not near genes chr2L_10_15010001 chr2L_15010001 RAL-908 398 chr2L 15044694 15044732 chr2L 15044790 15044828 17 96 4.0 0.0 2.0 5.7 134 chr2L 15044694 intergenic ck - chr2L 15044761 intergenic ck - chr2L 15044828 intergenic ck - chr2L_17_15040001 chr2L_15040001 RAL-908 399 chr2L 15078050 15078102 chr2L 15078158 15078210 15 108 3.0 4.5 3.8 3.1 160 chr2L 15078050 intron CG15270 + chr2L 15078130 intron CG15270 + chr2L 15078210 intron CG15270 + chr2L_15_15075001 chr2L_15075001 RAL-908 400 chr2L 15087748 15087762 chr2L 15087878 15087892 9 130 2.5 4.5 3.5 2.0 144 chr2L 15087748 exon CG15270 + chr2L 15087820 intron CG15270 + chr2L 15087892 intron CG15270 + chr2L_9_15085001 chr2L_15085001 RAL-908 401 chr2L 15098522 15098541 chr2L 15098622 15098641 5 100 2.0 2.0 2.0 1.7 119 chr2L 15098522 intergenic not near genes chr2L 15098582 intergenic not near genes chr2L 15098641 intergenic not near genes chr2L_5_15095001 chr2L_15095001 RAL-908 402 chr2L 15122757 15122809 chr2L 15122857 15122908 13 100 1.0 7.0 4.0 2.6 151 chr2L 15122757 intergenic not near genes chr2L 15122832 intergenic not near genes chr2L 15122908 intergenic not near genes chr2L_13_15120001 chr2L_15120001 RAL-908 403 chr2L 15156584 15156623 chr2L 15156681 15156724 8 96 2.5 1.0 1.8 2.9 140 chr2L 15156584 intergenic not near genes chr2L 15156654 intergenic not near genes chr2L 15156724 intergenic not near genes chr2L_8_15155001 chr2L_15155001 RAL-908 404 chr2L 15226350 15226383 chr2L 15226446 15226479 6 94 2.5 3.0 2.8 1.6 129 chr2L 15226350 intergenic not near genes chr2L 15226414 intergenic not near genes chr2L 15226479 intergenic not near genes chr2L_6_15225001 chr2L_15225001 RAL-908 405 chr2L 15307884 15307933 chr2L 15308260 15308287 10 373 6.5 2.5 4.5 1.8 403 chr2L 15307884 intergenic not near genes chr2L 15308086 intergenic not near genes chr2L 15308287 intergenic not near genes chr2L_10_15305001 chr2L_15305001 RAL-908 406 chr2L 15354911 15354954 chr2L 15355020 15355063 16 104 2.5 4.5 3.5 3.6 152 chr2L 15354911 intergenic not near genes chr2L 15354987 intergenic not near genes chr2L 15355063 intergenic not near genes chr2L_16_15350001 chr2L_15350001 RAL-908 407 chr2L 15403223 15403269 chr2L 15403321 15403367 6 98 4.0 3.5 3.8 1.2 144 chr2L 15403223 intergenic not near genes chr2L 15403295 intergenic not near genes chr2L 15403367 intergenic not near genes chr2L_6_15400001 chr2L_15400001 RAL-908 408 chr2L 15446032 15446084 chr2L 15453521 15453570 blood 16 7487 3.5 5.0 4.2 3.1 7538 chr2L 15446032 intergenic not near genes chr2L 15449801 intergenic not near genes chr2L 15453570 intergenic not near genes chr2L_16_15445001 chr2L_15445001 RAL-908 409 chr2L 15482558 15482602 chr2L 15482714 15482758 4 156 1.0 0.0 0.5 2.7 200 chr2L 15482558 intergenic not near genes chr2L 15482658 intergenic not near genes chr2L 15482758 intergenic not near genes chr2L_4_15480001 chr2L_15480001 RAL-908 410 chr2L 15514304 15514327 chr2L 15514407 15514431 8 104 7.0 7.5 7.2 1.0 127 chr2L 15514304 intergenic not near genes chr2L 15514368 intergenic not near genes chr2L 15514431 intergenic not near genes chr2L_8_15510001 chr2L_15510001 RAL-908 411 chr2L 15586404 15586440 chr2L 15593476 15593512 297 12 7072 3.0 5.0 4.0 2.4 7108 chr2L 15586404 intergenic not near genes chr2L 15589958 intergenic not near genes chr2L 15593512 intergenic not near genes chr2L_12_15585001 chr2L_15585001 RAL-908 412 chr2L 15600350 15600394 chr2L 15600471 15600515 18 119 4.0 5.0 4.5 3.3 165 chr2L 15600350 intergenic not near genes chr2L 15600432 intergenic not near genes chr2L 15600515 intergenic not near genes chr2L_18_15600001 chr2L_15600001 RAL-908 413 chr2L 15628393 15628411 chr2L 15628489 15628507 6 95 0.0 5.5 2.8 1.6 114 chr2L 15628393 intergenic CG7631 + chr2L 15628450 intergenic CG7631 + chr2L 15628507 intergenic CG7631 + chr2L_6_15625001 chr2L_15625001 RAL-908 414 chr2L 15736959 15737002 chr2L 15737064 15737107 16 99 1.5 1.0 1.2 7.3 148 chr2L 15736959 intron CycE - chr2L 15737033 intron CycE - chr2L 15737107 intron CycE - chr2L_16_15735001 chr2L_15735001 RAL-908 415 chr2L 15801139 15801176 chr2L 15801259 15801296 9 120 2.0 3.5 2.8 2.4 157 chr2L 15801139 intergenic not near genes chr2L 15801218 intergenic not near genes chr2L 15801296 intergenic not near genes chr2L_9_15800001 chr2L_15800001 RAL-908 416 chr2L 15820227 15820276 chr2L 15820361 15820411 19 134 3.5 3.0 3.2 4.5 184 chr2L 15820227 intergenic not near genes chr2L 15820319 intergenic not near genes chr2L 15820411 intergenic not near genes chr2L_19_15820001 chr2L_15820001 RAL-908 417 chr2L 15875227 15875267 chr2L 15875366 15875406 5 136 2.0 2.5 2.2 1.6 179 chr2L 15875227 intergenic not near genes chr2L 15875316 intergenic not near genes chr2L 15875406 intergenic not near genes chr2L_5_15875001 chr2L_15875001 RAL-908 418 chr2L 15954166 15954210 chr2L 15954265 15954311 6 99 19.0 23.0 21.0 0.3 145 chr2L 15954166 intron beat-Ib - chr2L 15954238 intron beat-Ib - chr2L 15954311 intron beat-Ib - chr2L_6_15950001 chr2L_15950001 RAL-908 419 chr2L 15956005 15956050 chr2L 15957491 15957526 hobo 6 1485 7.0 3.0 5.0 1.0 1521 chr2L 15956005 intron beat-Ib - chr2L 15956766 intron beat-Ib - chr2L 15957526 intron beat-Ib - chr2L_6_15955001 chr2L_15955001 RAL-908 420 chr2L 15967805 15967837 chr2L 15967918 15967949 6 110 2.0 2.5 2.2 1.9 144 chr2L 15967805 intergenic not near genes chr2L 15967877 intergenic not near genes chr2L 15967949 intergenic not near genes chr2L_6_15965001 chr2L_15965001 RAL-908 421 chr2L 15970851 15970882 chr2L 15971006 15971022 6 152 3.5 1.5 2.5 1.7 171 chr2L 15970851 intergenic not near genes chr2L 15970936 intergenic not near genes chr2L 15971022 intergenic not near genes chr2L_6_15970001 chr2L_15970001 RAL-908 422 chr2L 16001452 16001492 chr2L 16001560 16001600 8 107 0.0 5.5 2.8 2.1 148 chr2L 16001452 intron beat-Ic + chr2L 16001526 intron beat-Ic + chr2L 16001600 intron beat-Ic + chr2L_8_16000001 chr2L_16000001 RAL-908 423 chr2L 16008672 16008711 chr2L 16008770 16008809 8 98 3.0 1.5 2.2 2.5 137 chr2L 16008672 intron beat-Ic + chr2L 16008740 intron beat-Ic + chr2L 16008809 intron beat-Ic + chr2L_8_16005001 chr2L_16005001 RAL-908 424 chr2L 16032138 16032181 chr2L 16032260 16032303 9 121 2.0 3.0 2.5 2.6 165 chr2L 16032138 intron beat-Ic + chr2L 16032220 intron beat-Ic + chr2L 16032303 intron beat-Ic + chr2L_9_16030001 chr2L_16030001 RAL-908 425 chr2L 16058108 16058151 chr2L 16058269 16058312 8 160 3.0 3.5 3.2 1.9 204 chr2L 16058108 intron beat-Ia + chr2L 16058210 intron beat-Ia + chr2L 16058312 intron beat-Ia + chr2L_8_16055001 chr2L_16055001 RAL-908 426 chr2L 16059939 16059979 chr2L 16060057 16060097 7 118 2.5 3.5 3.0 1.8 158 chr2L 16059939 intron beat-Ia + chr2L 16060018 intron beat-Ia + chr2L 16060097 intron beat-Ia + chr2L_7_16060001 chr2L_16060001 RAL-908 427 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 11 145889 14.5 13.0 13.8 0.7 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_11_16140001 chr2L_16140001 RAL-908 428 chr2L 16084574 16084602 chr2L 16084706 16084734 9 132 2.5 5.0 3.8 1.9 160 chr2L 16084574 intergenic not near genes chr2L 16084654 intergenic not near genes chr2L 16084734 intergenic not near genes chr2L_9_16080001 chr2L_16080001 RAL-908 429 chr2L 16141157 16141192 chr2L 16146384 16146419 copia 14 5227 2.5 5.5 4.0 2.8 5262 chr2L 16141157 intergenic not near genes chr2L 16143788 intergenic not near genes chr2L 16146419 intergenic not near genes chr2L_14_16140001 chr2L_16140001 RAL-908 430 chr2L 16153718 16153740 chr2L 16160792 16160814 297 4 7074 6.5 4.5 5.5 0.6 7096 chr2L 16153718 intergenic not near genes chr2L 16157266 intergenic not near genes chr2L 16160814 intergenic not near genes chr2L_4_16155001 chr2L_16155001 RAL-908 431 chr2L 9084336 9084340 chr2L 16217660 16217660 6 7133322 9.0 13.0 11.0 0.5 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_6_12650001 chr2L_12650001 RAL-908 432 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 7 145889 14.5 13.0 13.8 0.5 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_7_16140001 chr2L_16140001 RAL-908 433 chr2L 16243682 16243857 chr2L 16243779 16243972 25 110 2.5 2.5 2.5 7.1 290 chr2L 16243682 exon CG42818 + chr2L 16243827 exon CG42818 + chr2L 16243972 exon CG42818 + chr2L_25_16240001 chr2L_16240001 RAL-908 434 chr2L 16280255 16280281 chr2L 16281434 16281472 1360 7 1189 1.0 2.0 1.5 2.8 1217 chr2L 16280255 intron crp - chr2L 16280864 intron crp - chr2L 16281472 intron crp - chr2L_7_16280001 chr2L_16280001 RAL-908 435 chr2L 16320322 16320368 chr2L 16320481 16320507 6 145 2.5 4.0 3.2 1.4 185 chr2L 16320322 intron cact - chr2L 16320414 intron cact - chr2L 16320507 intron cact - chr2L_6_16320001 chr2L_16320001 RAL-908 436 chr2L 16354758 16354786 chr2L 16354870 16354898 8 112 4.0 2.0 3.0 2.0 140 chr2L 16354758 intergenic CaBP1 -,CG4455 + chr2L 16354828 intergenic CaBP1 -,CG4455 + chr2L 16354898 3` UTR CaBP1 - chr2L_8_16350001 chr2L_16350001 RAL-908 437 chr2L 16363921 16363974 chr2L 16364187 16364227 11 265 3.0 1.5 2.2 3.4 306 chr2L 16363921 intergenic not near genes chr2L 16364074 intergenic not near genes chr2L 16364227 intergenic not near genes chr2L_11_16360001 chr2L_16360001 RAL-908 438 chr2L 16375372 16375398 chr2L 16375483 16375507 4 110 7.0 0.0 3.5 0.9 135 chr2L 16375372 intergenic not near genes chr2L 16375440 intergenic not near genes chr2L 16375507 intergenic not near genes chr2L_4_16375001 chr2L_16375001 RAL-908 439 chr2L 16434086 16434113 chr2L 16434188 16434215 7 102 6.5 3.0 4.8 1.2 129 chr2L 16434086 intron CG5888 - chr2L 16434150 intron CG5888 - chr2L 16434215 intron CG5888 - chr2L_7_16430001 chr2L_16430001 RAL-908 440 chr2L 16494947 16494983 chr2L 16497619 16497656 5 2673 19.0 20.0 19.5 0.2 2709 chr2L 16494947 intron Tpr2 + chr2L 16496302 intron Tpr2 + chr2L 16497656 intron Tpr2 + chr2L_5_16495001 chr2L_16495001 RAL-908 441 chr2L 16494762 16494810 chr2L 16497642 16497690 6 2881 23.0 22.5 22.8 0.3 2928 chr2L 16494762 intron Tpr2 + chr2L 16496226 intron Tpr2 + chr2L 16497690 intron Tpr2 + chr2L_6_16495001 chr2L_16495001 RAL-908 442 chr2L 16504977 16505001 chr2L 16505107 16505131 8 130 0.0 2.0 1.0 4.0 154 chr2L 16504977 intron Tpr2 + chr2L 16505054 intron Tpr2 + chr2L 16505131 intron Tpr2 + chr2L_8_16505001 chr2L_16505001 RAL-908 443 chr2L 16511947 16511993 chr2L 16519081 16519127 HMS-Beagle 16 7134 4.5 6.5 5.5 2.5 7180 chr2L 16511947 intron CG5953 - chr2L 16515537 intron CG5953 - chr2L 16519127 intron CG5953 - chr2L_16_16515001 chr2L_16515001 RAL-908 444 chr2L 16551865 16551905 chr2L 16551972 16552012 17 105 2.5 7.0 4.8 2.9 147 chr2L 16551865 intron CG42389 + chr2L 16551938 intron CG42389 + chr2L 16552012 intron CG42389 + chr2L_17_16550001 chr2L_16550001 RAL-908 445 chr2L 16572193 16572241 chr2L 16572301 16572356 15 112 1.5 2.5 2.0 5.0 163 chr2L 16572193 intron CG42389 + chr2L 16572274 intron CG42389 + chr2L 16572356 intron CG42389 + chr2L_15_16570001 chr2L_16570001 RAL-908 446 chr2L 16585770 16585785 chr2L 16585879 16585894 4 109 5.0 3.5 4.2 0.8 124 chr2L 16585770 intron CG42389 + chr2L 16585832 intron CG42389 + chr2L 16585894 intron CG42389 + chr2L_4_16585001 chr2L_16585001 RAL-908 447 chr2L 16585787 16585813 chr2L 16585877 16585922 8 105 3.5 3.5 3.5 1.8 135 chr2L 16585787 intron CG42389 + chr2L 16585854 intron CG42389 + chr2L 16585922 intron CG42389 + chr2L_8_16585001 chr2L_16585001 RAL-908 448 chr2L 16697048 16697086 chr2L 16697218 16697256 4 170 3.5 0.0 1.8 1.4 208 chr2L 16697048 intron grp + chr2L 16697152 intron grp + chr2L 16697256 intron grp + chr2L_4_16695001 chr2L_16695001 RAL-908 449 chr2L 16764952 16764991 chr2L 16765052 16765091 13 100 5.0 2.0 3.5 2.9 139 chr2L 16764952 intergenic not near genes chr2L 16765022 intergenic not near genes chr2L 16765091 intergenic not near genes chr2L_13_16765001 chr2L_16765001 RAL-908 450 chr2L 16958084 16958127 chr2L 16962892 16962933 Doc 12 4808 6.0 2.0 4.0 2.4 4849 chr2L 16958084 intergenic not near genes chr2L 16960508 intergenic not near genes chr2L 16962933 intergenic not near genes chr2L_12_16960001 chr2L_16960001 RAL-908 451 chr2L 16973723 16973771 chr2L 16974417 16974465 8 689 4.0 2.5 3.2 1.9 742 chr2L 16973723 intron beat-IIIb + chr2L 16974094 intron beat-IIIb + chr2L 16974465 intron beat-IIIb + chr2L_8_16970001 chr2L_16970001 RAL-908 452 chr2L 17032490 17032522 chr2L 17032592 17032627 11 105 4.0 3.0 3.5 2.4 137 chr2L 17032490 intergenic not near genes chr2L 17032558 intergenic not near genes chr2L 17032627 intergenic not near genes chr2L_11_17030001 chr2L_17030001 RAL-908 453 chr2L 17056728 17056766 chr2L 17056828 17056866 9 100 2.0 1.5 1.8 3.2 138 chr2L 17056728 intergenic not near genes chr2L 17056797 intergenic not near genes chr2L 17056866 intergenic not near genes chr2L_9_17055001 chr2L_17055001 RAL-908 454 chr2L 17070179 17070215 chr2L 17070295 17070331 9 115 6.0 3.5 4.8 1.6 152 chr2L 17070179 intergenic not near genes chr2L 17070255 intergenic not near genes chr2L 17070331 intergenic not near genes chr2L_9_17070001 chr2L_17070001 RAL-908 455 chr2L 17082891 17082908 chr2L 17083273 17083290 5 382 5.0 4.5 4.8 0.9 399 chr2L 17082891 intergenic not near genes chr2L 17083090 intergenic not near genes chr2L 17083290 intergenic not near genes chr2L_5_17080001 chr2L_17080001 RAL-908 456 chr2L 17087386 17087405 chr2L 17087502 17087543 9 132 1.5 3.0 2.2 2.8 157 chr2L 17087386 intergenic CG12620 + chr2L 17087464 intergenic CG12620 + chr2L 17087543 intergenic CG12620 + chr2L_9_17085001 chr2L_17085001 RAL-908 457 chr2L 17089515 17089539 chr2L 17089717 17089719 6 197 0.0 6.5 3.2 1.4 204 chr2L 17089515 intergenic CG12620 + chr2L 17089617 intergenic CG12620 + chr2L 17089719 intergenic not near genes chr2L_6_17085001 chr2L_17085001 RAL-908 458 chr2L 17101017 17101041 chr2L 17101526 17101558 8 510 23.5 21.5 22.5 0.3 541 chr2L 17101017 intergenic not near genes chr2L 17101288 intergenic not near genes chr2L 17101558 intergenic not near genes chr2L_8_17100001 chr2L_17100001 RAL-908 459 chr2L 17108248 17108271 chr2L 17108391 17108414 6 143 2.0 4.5 3.2 1.4 166 chr2L 17108248 intergenic not near genes chr2L 17108331 intergenic not near genes chr2L 17108414 intergenic not near genes chr2L_6_17105001 chr2L_17105001 RAL-908 460 chr2L 17158708 17158753 chr2L 17158831 17158876 12 123 2.5 4.0 3.2 2.9 168 chr2L 17158708 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158792 intron,intron CG34106 +,beat-IIIa + chr2L 17158876 intron,intron CG34106 +,beat-IIIa + chr2L_12_17155001 chr2L_17155001 RAL-908 461 chr2L 8894666 8894666 chr2L 17158908 17158908 7 8264242 20.5 12.5 16.5 0.4 8264242 chr2L 8894666 intergenic not near genes chr2L 13026787 intron CG9932 - chr2L 17158908 intron,intron CG34106 +,beat-IIIa + chr2L_7_13025001 chr2L_13025001 RAL-908 462 chr2L 17167575 17167594 chr2L 17167835 17167849 pogo 6 259 3.0 5.5 4.2 1.2 274 chr2L 17167575 intron,intron CG34106 +,beat-IIIa + chr2L 17167712 intron,intron CG34106 +,beat-IIIa + chr2L 17167849 intron,intron CG34106 +,beat-IIIa + chr2L_6_17165001 chr2L_17165001 RAL-908 463 chr2L 17168183 17168224 chr2L 17168976 17169022 9 795 3.0 5.0 4.0 1.8 839 chr2L 17168183 intron,intron CG34106 +,beat-IIIa + chr2L 17168602 intron,intron CG34106 +,beat-IIIa + chr2L 17169022 intron,intron CG34106 +,beat-IIIa + chr2L_9_17165001 chr2L_17165001 RAL-908 464 chr2L 17199144 17199191 chr2L 17200631 17200662 hobo 14 1486 5.0 5.5 5.2 2.3 1518 chr2L 17199144 intron beat-IIIc - chr2L 17199903 intron beat-IIIc - chr2L 17200662 intron beat-IIIc - chr2L_14_17195001 chr2L_17195001 RAL-908 465 chr2L 17256325 17256361 chr2L 17256445 17256486 9 124 4.0 2.0 3.0 2.2 161 chr2L 17256325 intron beat-IIIc - chr2L 17256406 intron beat-IIIc - chr2L 17256486 intron beat-IIIc - chr2L_9_17255001 chr2L_17255001 RAL-908 466 chr2L 17260859 17260892 chr2L 17260962 17260985 8 97 2.5 4.0 3.2 1.9 126 chr2L 17260859 intergenic beat-IIIc - chr2L 17260922 intergenic beat-IIIc - chr2L 17260985 intergenic beat-IIIc - chr2L_8_17260001 chr2L_17260001 RAL-908 467 chr2L 17267048 17267092 chr2L 17267158 17267202 11 107 1.5 4.0 2.8 2.9 154 chr2L 17267048 intergenic not near genes chr2L 17267125 intergenic not near genes chr2L 17267202 intergenic not near genes chr2L_11_17265001 chr2L_17265001 RAL-908 468 chr2L 17273176 17273216 chr2L 17277979 17278019 F-element 5 4803 4.0 2.0 3.0 1.2 4843 chr2L 17273176 intergenic not near genes chr2L 17275598 intergenic not near genes chr2L 17278019 intergenic not near genes chr2L_5_17275001 chr2L_17275001 RAL-908 469 chr2L 17292351 17292380 chr2L 17292451 17292461 11 98 6.0 5.5 5.8 1.6 110 chr2L 17292351 intergenic CG6380 - chr2L 17292406 intergenic CG6380 - chr2L 17292461 intergenic CG6380 - chr2L_11_17290001 chr2L_17290001 RAL-908 470 chr2L 17351927 17351956 chr2L 17352049 17352078 5 122 1.0 2.0 1.5 2.0 151 chr2L 17351927 intergenic not near genes chr2L 17352002 intergenic not near genes chr2L 17352078 intergenic not near genes chr2L_5_17350001 chr2L_17350001 RAL-908 471 chr2L 17360005 17360046 chr2L 17360203 17360244 15 198 1.0 0.0 0.5 10.0 239 chr2L 17360005 intergenic not near genes chr2L 17360124 intergenic not near genes chr2L 17360244 intergenic not near genes chr2L_15_17360001 chr2L_17360001 RAL-908 472 chr2L 17391984 17392027 chr2L 17392087 17392130 11 101 5.5 2.5 4.0 2.2 146 chr2L 17391984 intron CLIP-190 + chr2L 17392057 intron CLIP-190 + chr2L 17392130 intron CLIP-190 + chr2L_11_17390001 chr2L_17390001 RAL-908 473 chr2L 17425748 17425793 chr2L 17425895 17425940 14 146 7.0 4.5 5.8 2.1 192 chr2L 17425748 intron Dif - chr2L 17425844 intron Dif - chr2L 17425940 intron Dif - chr2L_14_17425001 chr2L_17425001 RAL-908 474 chr2L 17471356 17471391 chr2L 17471692 17471727 11 337 31.0 28.0 29.5 0.4 371 chr2L 17471356 intron BicD - chr2L 17471542 intron BicD - chr2L 17471727 intron,5` UTR BicD -,Sgt + chr2L_11_17470001 chr2L_17470001 RAL-908 475 chr2L 17471350 17471402 chr2L 17471729 17471738 8 350 31.5 26.5 29.0 0.3 388 chr2L 17471350 intron BicD - chr2L 17471544 intron BicD - chr2L 17471738 intron,5` UTR BicD -,Sgt + chr2L_8_17470001 chr2L_17470001 RAL-908 476 chr2L 17564133 17564185 chr2L 17564238 17564289 8 105 3.0 3.5 3.2 1.9 156 chr2L 17564133 intergenic not near genes chr2L 17564211 intergenic not near genes chr2L 17564289 intergenic not near genes chr2L_8_17560001 chr2L_17560001 RAL-908 477 chr2L 17565127 17565142 chr2L 17565239 17565255 7 113 8.5 9.0 8.8 0.7 128 chr2L 17565127 intergenic not near genes chr2L 17565191 intergenic not near genes chr2L 17565255 intergenic not near genes chr2L_7_17565001 chr2L_17565001 RAL-908 478 chr2L 17570024 17570034 chr2L 17570121 17570131 5 97 9.5 4.5 7.0 0.6 107 chr2L 17570024 intergenic not near genes chr2L 17570078 intergenic not near genes chr2L 17570131 intergenic not near genes chr2L_5_17570001 chr2L_17570001 RAL-908 479 chr2L 17571146 17571161 chr2L 17571249 17571264 6 103 0.0 5.5 2.8 1.6 118 chr2L 17571146 intergenic not near genes chr2L 17571205 intergenic not near genes chr2L 17571264 intergenic not near genes chr2L_6_17570001 chr2L_17570001 RAL-908 480 chr2L 17572271 17572317 chr2L 17572389 17572436 16 119 5.0 5.0 5.0 2.7 165 chr2L 17572271 intergenic not near genes chr2L 17572354 intergenic not near genes chr2L 17572436 intergenic not near genes chr2L_16_17570001 chr2L_17570001 RAL-908 481 chr2L 17579862 17579916 chr2L 17579960 17580014 15 96 4.5 3.0 3.8 3.1 152 chr2L 17579862 5` UTR CR45698 + chr2L 17579938 5` UTR CR45698 + chr2L 17580014 intergenic CR45698 + chr2L_15_17575001 chr2L_17575001 RAL-908 482 chr2L 17635227 17635279 chr2L 17635677 17635706 9 445 6.0 4.0 5.0 1.5 479 chr2L 17635227 intergenic not near genes chr2L 17635466 intergenic not near genes chr2L 17635706 intergenic not near genes chr2L_9_17635001 chr2L_17635001 RAL-908 483 chr2L 17687499 17687521 chr2L 17692264 17692286 F-element 5 4765 5.0 4.0 4.5 0.9 4787 chr2L 17687499 intron CadN - chr2L 17689892 intron CadN - chr2L 17692286 intron CadN - chr2L_5_17685001 chr2L_17685001 RAL-908 484 chr2L 17796005 17796041 chr2L 17796106 17796111 10 98 1.5 2.0 1.8 3.6 106 chr2L 17796005 intron CadN2 - chr2L 17796058 intron CadN2 - chr2L 17796111 intron CadN2 - chr2L_10_17795001 chr2L_17795001 RAL-908 485 chr2L 17818424 17818463 chr2L 17818600 17818640 11 177 4.0 3.0 3.5 2.4 216 chr2L 17818424 intron CadN2 - chr2L 17818532 intron CadN2 - chr2L 17818640 intron CadN2 - chr2L_11_17815001 chr2L_17815001 RAL-908 486 chr2L 17819906 17819943 chr2L 17825129 17825166 copia 7 5223 3.5 4.0 3.8 1.5 5260 chr2L 17819906 intron CadN2 - chr2L 17822536 intron CadN2 - chr2L 17825166 intron CadN2 - chr2L_7_17820001 chr2L_17820001 RAL-908 487 chr2L 17847200 17847252 chr2L 17847305 17847357 11 104 2.0 5.0 3.5 2.4 157 chr2L 17847200 intron CadN2 - chr2L 17847278 intron CadN2 - chr2L 17847357 intron CadN2 - chr2L_11_17845001 chr2L_17845001 RAL-908 488 chr2L 17855478 17855516 chr2L 17855575 17855614 10 96 5.5 5.0 5.2 1.6 136 chr2L 17855478 intron CadN2 - chr2L 17855546 intron CadN2 - chr2L 17855614 intron CadN2 - chr2L_10_17855001 chr2L_17855001 RAL-908 489 chr2L 17880573 17880610 chr2L 17880705 17880742 6 132 3.5 3.0 3.2 1.4 169 chr2L 17880573 intergenic not near genes chr2L 17880658 intergenic not near genes chr2L 17880742 intergenic not near genes chr2L_6_17880001 chr2L_17880001 RAL-908 490 chr2L 17906740 17906783 chr2L 17906843 17906886 10 102 2.0 1.0 1.5 4.0 146 chr2L 17906740 intergenic not near genes chr2L 17906813 intergenic not near genes chr2L 17906886 intergenic not near genes chr2L_10_17905001 chr2L_17905001 RAL-908 491 chr2L 17911950 17911988 chr2L 17914148 17914186 pogo 13 2198 5.0 5.5 5.2 2.1 2236 chr2L 17911950 intergenic not near genes chr2L 17913068 intergenic not near genes chr2L 17914186 intergenic CG43271 - chr2L_13_17910001 chr2L_17910001 RAL-908 492 chr2L 17951926 17951977 chr2L 17953413 17953464 hobo 10 1486 3.5 2.0 2.8 2.6 1538 chr2L 17951926 intergenic CR44398 -,CR44397 - chr2L 17952695 intergenic not near genes chr2L 17953464 intergenic not near genes chr2L_10_17950001 chr2L_17950001 RAL-908 493 chr2L 17989996 17990017 chr2L 17990073 17990113 7 83 5.5 3.5 4.5 1.3 117 chr2L 17989996 intergenic Prosbeta5R2 + chr2L 17990054 intergenic Prosbeta5R2 + chr2L 17990113 intergenic Prosbeta5R2 + chr2L_7_17990001 chr2L_17990001 RAL-908 494 chr2L 17992065 17992085 chr2L 17992338 17992357 5 271 4.5 5.5 5.0 0.8 292 chr2L 17992065 intergenic Prosbeta5R2 + chr2L 17992211 intergenic Prosbeta5R2 + chr2L 17992357 intergenic Prosbeta5R2 + chr2L_5_17990001 chr2L_17990001 RAL-908 495 chr2L 18024145 18024186 chr2L 18024434 18024475 9 289 1.5 3.5 2.5 2.6 330 chr2L 18024145 intron rdo + chr2L 18024310 intron rdo + chr2L 18024475 intron rdo + chr2L_9_18020001 chr2L_18020001 RAL-908 496 chr2L 18029042 18029091 chr2L 18029147 18029196 10 104 3.0 2.5 2.8 2.6 154 chr2L 18029042 intron rdo + chr2L 18029119 intron rdo + chr2L 18029196 intron rdo + chr2L_10_18025001 chr2L_18025001 RAL-908 497 chr2L 18041413 18041463 chr2L 18041702 18041751 19 289 3.0 4.5 3.8 4.0 338 chr2L 18041413 intron rdo + chr2L 18041582 intron rdo + chr2L 18041751 intron rdo + chr2L_19_18040001 chr2L_18040001 RAL-908 498 chr2L 18051865 18051903 chr2L 18061032 18061070 roo 5 9167 3.5 5.5 4.5 0.9 9205 chr2L 18051865 intron rdo + chr2L 18056468 intron rdo + chr2L 18061070 intron rdo + chr2L_5_18055001 chr2L_18055001 RAL-908 499 chr2L 18111221 18111233 chr2L 18111332 18111344 4 111 3.5 4.5 4.0 0.8 123 chr2L 18111221 intergenic not near genes chr2L 18111282 intergenic not near genes chr2L 18111344 intergenic not near genes chr2L_4_18110001 chr2L_18110001 RAL-908 500 chr2L 18172280 18172334 chr2L 18172530 18172575 19 247 15.0 18.5 16.8 1.1 295 chr2L 18172280 intron CG42750 - chr2L 18172428 intron CG42750 - chr2L 18172575 intron CG42750 - chr2L_19_18170001 chr2L_18170001 RAL-908 501 chr2L 18165906 18165956 chr2L 18174772 18174822 13 8868 28.5 29.0 28.8 0.4 8916 chr2L 18165906 intron CG42750 - chr2L 18170364 intron CG42750 - chr2L 18174822 intron CG42750 - chr2L_13_18170001 chr2L_18170001 RAL-908 502 chr2L 18184989 18185020 chr2L 18185123 18185155 5 135 3.0 2.0 2.5 1.4 166 chr2L 18184989 intron,5` UTR CG42750 -,CG7180 - chr2L 18185072 intron CG42750 - chr2L 18185155 intron CG42750 - chr2L_5_18185001 chr2L_18185001 RAL-908 503 chr2L 18263078 18263121 chr2L 18263193 18263236 16 114 5.0 7.0 6.0 2.3 158 chr2L 18263078 intron CG42750 - chr2L 18263157 intron CG42750 - chr2L 18263236 intron CG42750 - chr2L_16_18260001 chr2L_18260001 RAL-908 504 chr2L 18311806 18311854 chr2L 18311942 18311964 5 131 2.5 2.0 2.2 1.6 158 chr2L 18311806 intergenic CR45721 + chr2L 18311885 intergenic not near genes chr2L 18311964 intergenic not near genes chr2L_5_18310001 chr2L_18310001 RAL-908 505 chr2L 18408011 18408047 chr2L 18412815 18412850 Doc 16 4804 2.5 3.0 2.8 4.2 4839 chr2L 18408011 intergenic not near genes chr2L 18410430 intergenic not near genes chr2L 18412850 intergenic not near genes chr2L_16_18410001 chr2L_18410001 RAL-908 506 chr2L 18423834 18423865 chr2L 18423945 18423976 10 111 5.0 6.0 5.5 1.5 142 chr2L 18423834 intergenic not near genes chr2L 18423905 intergenic not near genes chr2L 18423976 intergenic not near genes chr2L_10_18420001 chr2L_18420001 RAL-908 507 chr2L 18555626 18555673 chr2L 18555733 18555769 18 106 3.0 5.0 4.0 3.6 143 chr2L 18555626 intron Pde11 - chr2L 18555698 intron Pde11 - chr2L 18555769 intron Pde11 - chr2L_18_18555001 chr2L_18555001 RAL-908 508 chr2L 18559017 18559055 chr2L 18559173 18559211 9 156 3.0 2.5 2.8 2.4 194 chr2L 18559017 intron Pde11 - chr2L 18559114 intron Pde11 - chr2L 18559211 intron Pde11 - chr2L_9_18555001 chr2L_18555001 RAL-908 509 chr2L 16217660 16217660 chr2L 18622718 18622719 8 2405059 14.5 12.5 13.5 0.6 2405059 chr2L 16217660 intergenic not near genes chr2L 17420190 intron Dif - chr2L 18622719 intron MESR3 + chr2L_8_17420001 chr2L_17420001 RAL-908 510 chr2L 18633587 18633600 chr2L 18638394 18638407 Doc 4 4807 4.5 2.5 3.5 0.9 4820 chr2L 18633587 intron MESR3 + chr2L 18635997 intron MESR3 + chr2L 18638407 intron MESR3 + chr2L_4_18635001 chr2L_18635001 RAL-908 511 chr2L 18737070 18737089 chr2L 18737211 18737230 6 140 3.5 4.5 4.0 1.2 160 chr2L 18737070 intergenic not near genes chr2L 18737150 intergenic not near genes chr2L 18737230 intergenic not near genes chr2L_6_18735001 chr2L_18735001 RAL-908 512 chr2L 18766440 18766472 chr2L 18766581 18766584 4 134 1.5 0.0 0.8 2.2 144 chr2L 18766440 intron ham - chr2L 18766512 intron ham - chr2L 18766584 intron ham - chr2L_4_18765001 chr2L_18765001 RAL-908 513 chr2L 18812540 18812578 chr2L 18812823 18812861 12 283 4.0 2.0 3.0 3.0 321 chr2L 18812540 intergenic CG17325 +,CG42305 + chr2L 18812700 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812861 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_12_18810001 chr2L_18810001 RAL-908 514 chr2L 18898382 18898427 chr2L 18898484 18898529 19 98 3.5 0.0 1.8 6.8 147 chr2L 18898382 intergenic not near genes chr2L 18898456 intergenic not near genes chr2L 18898529 intergenic not near genes chr2L_19_18895001 chr2L_18895001 RAL-908 515 chr2L 18996924 18996969 chr2L 18997070 18997118 13 148 4.5 2.5 3.5 2.9 194 chr2L 18996924 intergenic not near genes chr2L 18997021 intergenic CG31792 + chr2L 18997118 intergenic CG31792 + chr2L_13_18995001 chr2L_18995001 RAL-908 516 chr2L 18141268 18141268 chr2L 18997150 18997150 4 855882 15.5 12.5 14.0 0.3 855882 chr2L 18141268 intron Socs36E - chr2L 18569209 intron Pde11 - chr2L 18997150 intergenic CG31792 + chr2L_4_18565001 chr2L_18565001 RAL-908 517 chr2L 19024096 19024097 chr2L 21768291 21768291 4 2744195 5.0 10.0 7.5 0.5 2744195 chr2L 19024096 3` UTR CR43700 - chr2L 20396194 intron CG10947 - chr2L 21768291 intron CG31612 - chr2L_4_20395001 chr2L_20395001 RAL-908 518 chr2L 19147354 19147387 chr2L 19154409 19154427 297 5 7052 3.0 6.0 4.5 0.9 7073 chr2L 19147354 intron brat + chr2L 19150890 intron brat + chr2L 19154427 intron brat + chr2L_5_19150001 chr2L_19150001 RAL-908 519 chr2L 19246807 19246852 chr2L 19246907 19246952 15 99 5.5 1.5 3.5 3.3 145 chr2L 19246807 intergenic not near genes chr2L 19246880 intergenic not near genes chr2L 19246952 intergenic not near genes chr2L_15_19245001 chr2L_19245001 RAL-908 520 chr2L 19345012 19345043 chr2L 19357241 19357271 blood 12 12229 3.0 4.0 3.5 2.7 12259 chr2L 19345012 intron dnt - chr2L 19351142 intron dnt - chr2L 19357271 intron dnt - chr2L_12_19350001 chr2L_19350001 RAL-908 521 chr2L 19357525 19357567 chr2L 19357635 19357677 14 109 5.0 3.5 4.2 2.7 152 chr2L 19357525 intron dnt - chr2L 19357601 intron dnt - chr2L 19357677 intron dnt - chr2L_14_19355001 chr2L_19355001 RAL-908 522 chr2L 19378323 19378366 chr2L 19378426 19378469 11 103 5.0 1.0 3.0 2.8 146 chr2L 19378323 intergenic not near genes chr2L 19378396 intergenic not near genes chr2L 19378469 intergenic not near genes chr2L_11_19375001 chr2L_19375001 RAL-908 523 chr2L 19380501 19380529 chr2L 19380592 19380628 8 97 1.0 4.0 2.5 2.3 127 chr2L 19380501 intergenic CG17350 + chr2L 19380564 intergenic CG17350 + chr2L 19380628 intergenic CG17350 + chr2L_8_19380001 chr2L_19380001 RAL-908 524 chr2L 19405597 19405634 chr2L 19405707 19405744 12 110 4.5 2.0 3.2 2.9 147 chr2L 19405597 intron Pax - chr2L 19405670 intron Pax - chr2L 19405744 intron Pax - chr2L_12_19405001 chr2L_19405001 RAL-908 525 chr2L 19407696 19407736 chr2L 19407913 19407953 11 216 3.5 3.0 3.2 2.6 257 chr2L 19407696 intron Pax - chr2L 19407824 intron Pax - chr2L 19407953 intron Pax - chr2L_11_19405001 chr2L_19405001 RAL-908 526 chr2L 19437503 19437528 chr2L 19437613 19437640 8 112 2.5 0.5 1.5 3.2 137 chr2L 19437503 intron CG10237 - chr2L 19437572 intron CG10237 - chr2L 19437640 intron CG10237 - chr2L_8_19435001 chr2L_19435001 RAL-908 527 chr2L 19441045 19441089 chr2L 19441142 19441186 13 95 3.5 2.5 3.0 3.2 141 chr2L 19441045 intron CG10237 - chr2L 19441116 intron CG10237 - chr2L 19441186 5` UTR CG10237 - chr2L_13_19440001 chr2L_19440001 RAL-908 528 chr2L 19608590 19608612 chr2L 19608701 19608723 4 111 3.0 4.5 3.8 0.8 133 chr2L 19608590 intron Lar + chr2L 19608656 intron Lar + chr2L 19608723 intron Lar + chr2L_4_19605001 chr2L_19605001 RAL-908 529 chr2L 19620074 19620127 chr2L 19621083 19621136 jockey 8 1009 2.0 1.0 1.5 3.2 1062 chr2L 19620074 intron Lar + chr2L 19620605 intron Lar + chr2L 19621136 intron Lar + chr2L_8_19620001 chr2L_19620001 RAL-908 530 chr2L 19652548 19652602 chr2L 19674004 19674058 opus 17 21456 2.0 3.5 2.8 4.5 21510 chr2L 19652548 intron Lar + chr2L 19663303 intron Lar + chr2L 19674058 intron Lar + chr2L_17_19660001 chr2L_19660001 RAL-908 531 chr2L 19703519 19703565 chr2L 19712675 19712721 roo 13 9154 3.0 5.0 4.0 2.6 9202 chr2L 19703519 intron Lar + chr2L 19708120 intron Lar + chr2L 19712721 intron Lar + chr2L_13_19705001 chr2L_19705001 RAL-908 532 chr2L 19762788 19762837 chr2L 19763050 19763079 pogo 12 260 2.5 2.0 2.2 3.8 291 chr2L 19762788 exon fbp - chr2L 19762934 intron fbp - chr2L 19763079 intron fbp - chr2L_12_19760001 chr2L_19760001 RAL-908 533 chr2L 19776640 19776652 chr2L 19776740 19776752 4 100 10.0 6.5 8.2 0.4 112 chr2L 19776640 3` UTR CdGAPr - chr2L 19776696 3` UTR CdGAPr - chr2L 19776752 3` UTR CdGAPr - chr2L_4_19775001 chr2L_19775001 RAL-908 534 chr2L 19823670 19823688 chr2L 19823790 19823807 6 119 0.5 3.5 2.0 2.0 137 chr2L 19823670 intron sick + chr2L 19823738 intron sick + chr2L 19823807 intron sick + chr2L_6_19820001 chr2L_19820001 RAL-908 535 chr2L 19824405 19824428 chr2L 19824508 19824531 8 103 2.0 6.0 4.0 1.6 126 chr2L 19824405 intron sick + chr2L 19824468 intron sick + chr2L 19824531 intron sick + chr2L_8_19820001 chr2L_19820001 RAL-908 536 chr2L 19837261 19837302 chr2L 19837359 19837402 14 99 2.5 2.5 2.5 4.0 141 chr2L 19837261 intron sick + chr2L 19837332 intron sick + chr2L 19837402 intron sick + chr2L_14_19835001 chr2L_19835001 RAL-908 537 chr2L 19846235 19846276 chr2L 19846336 19846364 8 99 0.0 3.5 1.8 2.9 129 chr2L 19846235 intron sick + chr2L 19846300 intron sick + chr2L 19846364 intron sick + chr2L_8_19845001 chr2L_19845001 RAL-908 538 chr2L 19911691 19911730 chr2L 19911798 19911839 5 108 1.5 6.0 3.8 1.0 148 chr2L 19911691 intron,3` UTR sick +,CR43097 - chr2L 19911765 intron,3` UTR sick +,CR43097 - chr2L 19911839 intron,3` UTR sick +,TotF - chr2L_5_19910001 chr2L_19910001 RAL-908 539 chr2L 20005855 20005892 chr2L 20010951 20010988 flea 11 5095 3.5 5.5 4.5 2.0 5133 chr2L 20005855 intron CG43861 - chr2L 20008422 intron CG43861 - chr2L 20010988 intron CG43861 - chr2L_11_20005001 chr2L_20005001 RAL-908 540 chr2L 20022070 20022122 chr2L 20022203 20022254 9 133 2.5 2.5 2.5 2.6 184 chr2L 20022070 intergenic not near genes chr2L 20022162 intergenic not near genes chr2L 20022254 intergenic not near genes chr2L_9_20020001 chr2L_20020001 RAL-908 541 chr2L 20041435 20041458 chr2L 20041514 20041559 4 93 3.0 3.0 3.0 1.0 124 chr2L 20041435 intron sNPF + chr2L 20041497 intron sNPF + chr2L 20041559 intron sNPF + chr2L_4_20040001 chr2L_20040001 RAL-908 542 chr2L 20069506 20069549 chr2L 20069606 20069645 6 94 3.0 2.0 2.5 1.7 139 chr2L 20069506 exon bwa + chr2L 20069576 intron bwa + chr2L 20069645 intron bwa + chr2L_6_20065001 chr2L_20065001 RAL-908 543 chr2L 20124312 20124359 chr2L 20124410 20124457 4 98 3.0 7.0 5.0 0.7 145 chr2L 20124312 intergenic not near genes chr2L 20124384 intergenic not near genes chr2L 20124457 intergenic not near genes chr2L_4_20120001 chr2L_20120001 RAL-908 544 chr2L 20272094 20272141 chr2L 20282825 20282872 copia 11 10729 3.5 3.0 3.2 2.6 10778 chr2L 20272094 intergenic not near genes chr2L 20277483 intergenic not near genes chr2L 20282872 intergenic not near genes chr2L_11_20275001 chr2L_20275001 RAL-908 545 chr2L 20291528 20291560 chr2L 20291629 20291658 6 98 2.5 3.5 3.0 1.5 130 chr2L 20291528 intergenic not near genes chr2L 20291593 intergenic not near genes chr2L 20291658 intergenic not near genes chr2L_6_20290001 chr2L_20290001 RAL-908 546 chr2L 20296490 20296541 chr2L 20296591 20296642 14 100 3.0 3.0 3.0 3.5 152 chr2L 20296490 intergenic CR43414 - chr2L 20296566 intergenic CR43414 - chr2L 20296642 3` UTR CR43414 - chr2L_14_20295001 chr2L_20295001 RAL-908 547 chr2L 20303172 20303183 chr2L 20310636 20310671 blood 4 7482 8.0 9.0 8.5 0.4 7499 chr2L 20303172 intergenic not near genes chr2L 20306922 intergenic not near genes chr2L 20310671 intergenic not near genes chr2L_4_20305001 chr2L_20305001 RAL-908 548 chr2L 20322614 20322664 chr2L 20322717 20322764 15 101 3.0 2.0 2.5 4.3 150 chr2L 20322614 intron spir + chr2L 20322689 intron spir + chr2L 20322764 intron spir + chr2L_15_20320001 chr2L_20320001 RAL-908 549 chr2L 20372210 20372246 chr2L 20372471 20372506 pogo 11 260 1.0 2.5 1.8 3.9 296 chr2L 20372210 intergenic Ugt37a1 - chr2L 20372358 intergenic Ugt37a1 - chr2L 20372506 exon Ugt37a1 - chr2L_11_20370001 chr2L_20370001 RAL-908 550 chr2L 20382350 20382376 chr2L 20382589 20382604 6 242 1.5 6.0 3.8 1.2 254 chr2L 20382350 5` UTR CG16798 - chr2L 20382477 intergenic CG16798 - chr2L 20382604 intergenic CG16798 - chr2L_6_20380001 chr2L_20380001 RAL-908 551 chr2L 20399750 20399760 chr2L 20400011 20400021 5 261 2.0 4.0 3.0 1.2 271 chr2L 20399750 intron CG10947 - chr2L 20399886 intron CG10947 - chr2L 20400021 intron CG10947 - chr2L_5_20395001 chr2L_20395001 RAL-908 552 chr2L 20498670 20498703 chr2L 20498789 20498822 11 119 2.5 3.0 2.8 2.9 152 chr2L 20498670 intergenic not near genes chr2L 20498746 intergenic not near genes chr2L 20498822 intergenic not near genes chr2L_11_20495001 chr2L_20495001 RAL-908 553 chr2L 20568643 20568682 chr2L 20569051 20569092 X-element 12 408 2.5 3.5 3.0 3.0 449 chr2L 20568643 intron CR45347 + chr2L 20568868 intron CR45347 + chr2L 20569092 intron CR45347 + chr2L_12_20565001 chr2L_20565001 RAL-908 554 chr2L 20576209 20576242 chr2L 20583697 20583730 blood 9 7486 7.5 6.5 7.0 1.1 7521 chr2L 20576209 intergenic CR45347 + chr2L 20579970 intergenic not near genes chr2L 20583730 3` UTR CR44909 - chr2L_9_20575001 chr2L_20575001 RAL-908 555 chr2L 20626089 20626133 chr2L 20626215 20626259 15 125 1.5 5.0 3.2 3.6 170 chr2L 20626089 3` UTR CR44909 - chr2L 20626174 3` UTR CR44909 - chr2L 20626259 intergenic CR44909 - chr2L_15_20625001 chr2L_20625001 RAL-908 556 chr2L 20639489 20639527 chr2L 20639782 20639823 INE-1 9 295 4.5 5.0 4.8 1.6 334 chr2L 20639489 intergenic not near genes chr2L 20639656 intergenic CG31680 + chr2L 20639823 intergenic CG31680 + chr2L_9_20635001 chr2L_20635001 RAL-908 557 chr2L 20644166 20644208 chr2L 20644420 20644461 7 253 1.5 1.0 1.2 3.2 295 chr2L 20644166 exon phr6-4 - chr2L 20644314 exon phr6-4 - chr2L 20644461 exon phr6-4 - chr2L_7_20640001 chr2L_20640001 RAL-908 558 chr2L 20668676 20668720 chr2L 20668772 20668815 12 94 7.0 6.0 6.5 1.6 139 chr2L 20668676 intron CG31678 - chr2L 20668746 intron CG31678 - chr2L 20668815 intron CG31678 - chr2L_12_20665001 chr2L_20665001 RAL-908 559 chr2L 20674811 20674861 chr2L 20674916 20674947 4 97 2.0 0.0 1.0 2.0 136 chr2L 20674811 intron CG31678 - chr2L 20674879 intron CG31678 - chr2L 20674947 intron CG31678 - chr2L_4_20670001 chr2L_20670001 RAL-908 560 chr2L 20806065 20806096 chr2L 20806171 20806184 9 99 5.5 5.0 5.2 1.5 119 chr2L 20806065 intron CG9328 + chr2L 20806124 intron CG9328 + chr2L 20806184 intron CG9328 + chr2L_9_20805001 chr2L_20805001 RAL-908 561 chr2L 20819100 20819144 chr2L 20819204 20819248 15 103 4.5 6.0 5.2 2.4 148 chr2L 20819100 intergenic not near genes chr2L 20819174 intergenic not near genes chr2L 20819248 intergenic not near genes chr2L_15_20815001 chr2L_20815001 RAL-908 562 chr2L 20821485 20821509 chr2L 20821652 20821677 9 165 3.5 1.5 2.5 2.6 192 chr2L 20821485 intergenic not near genes chr2L 20821581 intergenic not near genes chr2L 20821677 intergenic not near genes chr2L_9_20820001 chr2L_20820001 RAL-908 563 chr2L 20835789 20835835 chr2L 20836526 20836572 Quasimodo 10 736 4.0 4.5 4.2 1.9 783 chr2L 20835789 5` UTR Oseg5 - chr2L 20836180 intergenic Oseg5 -,Spn38F - chr2L 20836572 intergenic Spn38F - chr2L_10_20835001 chr2L_20835001 RAL-908 564 chr2L 20840288 20840325 chr2L 20840506 20840533 10 214 5.5 4.0 4.8 1.7 245 chr2L 20840288 intergenic CG31676 + chr2L 20840410 intergenic CG31676 + chr2L 20840533 intergenic CG31676 + chr2L_10_20840001 chr2L_20840001 RAL-908 565 chr2L 20891526 20891546 chr2L 20896647 20896667 jockey 10 5120 6.0 7.0 6.5 1.3 5141 chr2L 20891526 intron,intron CG43739 -,sky - chr2L 20894096 intron,intron CG43739 -,sky - chr2L 20896667 intron,intron CG43739 -,sky - chr2L_10_20890001 chr2L_20890001 RAL-908 566 chr2L 20934585 20934634 chr2L 20934800 20934849 13 215 3.0 5.5 4.2 2.5 264 chr2L 20934585 intergenic CG9270 - chr2L 20934717 intergenic not near genes chr2L 20934849 intergenic not near genes chr2L_13_20930001 chr2L_20930001 RAL-908 567 chr2L 20946924 20946952 chr2L 20947031 20947059 6 107 5.5 2.5 4.0 1.2 135 chr2L 20946924 intergenic CR44606 - chr2L 20946992 intergenic CR44606 - chr2L 20947059 intergenic CR44606 - chr2L_6_20945001 chr2L_20945001 RAL-908 568 chr2L 20957703 20957750 chr2L 20957827 20957869 5 119 2.0 2.0 2.0 1.7 166 chr2L 20957703 intergenic not near genes chr2L 20957786 intergenic not near genes chr2L 20957869 intergenic not near genes chr2L_5_20955001 chr2L_20955001 RAL-908 569 chr2L 20968298 20968342 chr2L 20968476 20968524 13 182 3.5 7.0 5.2 2.1 226 chr2L 20968298 intron CG42238 - chr2L 20968411 intron CG42238 - chr2L 20968524 intron CG42238 - chr2L_13_20965001 chr2L_20965001 RAL-908 570 chr2L 20976631 20976649 chr2L 20981466 20981484 X-element 5 4835 7.0 6.0 6.5 0.7 4853 chr2L 20976631 intron CG42238 - chr2L 20979058 intron CG42238 - chr2L 20981484 intron CG42238 - chr2L_5_20975001 chr2L_20975001 RAL-908 571 chr2L 20976650 20976670 chr2L 20981465 20981484 X-element 6 4825 5.0 6.0 5.5 0.9 4834 chr2L 20976650 intron CG42238 - chr2L 20979067 intron CG42238 - chr2L 20981484 intron CG42238 - chr2L_6_20975001 chr2L_20975001 RAL-908 572 chr2L 20984385 20984422 chr2L 20984691 20984728 12 305 0.0 4.0 2.0 4.0 343 chr2L 20984385 intron CG42238 - chr2L 20984556 intron CG42238 - chr2L 20984728 intron CG42238 - chr2L_12_20980001 chr2L_20980001 RAL-908 573 chr2L 21020256 21020304 chr2L 21023953 21023995 NOF 8 3687 4.5 3.5 4.0 1.6 3739 chr2L 21020256 intron CG42238 - chr2L 21022126 intron CG42238 - chr2L 21023995 intron CG42238 - chr2L_8_21020001 chr2L_21020001 RAL-908 574 chr2L 21034126 21034170 chr2L 21034227 21034230 10 92 3.5 5.5 4.5 1.8 104 chr2L 21034126 intron CG42238 - chr2L 21034178 intron CG42238 - chr2L 21034230 intron CG42238 - chr2L_10_21030001 chr2L_21030001 RAL-908 575 chr2L 21041132 21041157 chr2L 21049413 21049432 Tirant 9 8280 4.5 5.0 4.8 1.6 8300 chr2L 21041132 intron CG42238 - chr2L 21045282 intron CG42238 - chr2L 21049432 intron CG42238 - chr2L_9_21045001 chr2L_21045001 RAL-908 576 chr2L 21041158 21041163 chr2L 21049405 21049427 Tirant 4 8268 3.0 4.0 3.5 0.9 8269 chr2L 21041158 intron CG42238 - chr2L 21045292 intron CG42238 - chr2L 21049427 intron CG42238 - chr2L_4_21045001 chr2L_21045001 RAL-908 577 chr2L 21074902 21074951 chr2L 21075013 21075062 11 111 4.0 4.0 4.0 2.2 160 chr2L 21074902 intergenic not near genes chr2L 21074982 intergenic tadr + chr2L 21075062 intergenic tadr + chr2L_11_21070001 chr2L_21070001 RAL-908 578 chr2L 21086427 21086450 chr2L 21086542 21086585 7 130 4.0 3.5 3.8 1.5 158 chr2L 21086427 5` UTR CG33509 - chr2L 21086506 5` UTR CG33509 - chr2L 21086585 intergenic CG33509 -,ppk13 - chr2L_7_21085001 chr2L_21085001 RAL-908 579 chr2L 21088906 21088950 chr2L 21089001 21089053 13 100 3.0 6.0 4.5 2.4 147 chr2L 21088906 intergenic ppk13 -,CG9259 + chr2L 21088980 intergenic ppk13 -,CG9259 + chr2L 21089053 intergenic ppk13 -,CG9259 + chr2L_13_21085001 chr2L_21085001 RAL-908 580 chr2L 21158867 21158908 chr2L 21158963 21159005 11 93 3.5 4.0 3.8 2.3 138 chr2L 21158867 intergenic CG9248 +,CG9249 - chr2L 21158936 5` UTR CG9248 + chr2L 21159005 5` UTR CG9248 + chr2L_11_21155001 chr2L_21155001 RAL-908 581 chr2L 21286585 21286622 chr2L 21286683 21286720 10 98 5.5 4.5 5.0 1.7 135 chr2L 21286585 exon Mio - chr2L 21286652 intron Mio - chr2L 21286720 intron Mio - chr2L_10_21285001 chr2L_21285001 RAL-908 582 chr2L 21347533 21347580 chr2L 21355025 21355072 blood 21 7492 2.5 8.0 5.2 3.4 7539 chr2L 21347533 intron Tsp39D + chr2L 21351302 intron Tsp39D + chr2L 21355072 intron Tsp39D + chr2L_21_21350001 chr2L_21350001 RAL-908 583 chr2L 21355593 21355631 chr2L 21355758 21355796 8 165 2.5 6.0 4.2 1.5 203 chr2L 21355593 exon Tsp39D + chr2L 21355694 intron Tsp39D + chr2L 21355796 intron Tsp39D + chr2L_8_21355001 chr2L_21355001 RAL-908 584 chr2L 21392196 21392244 chr2L 21392302 21392314 14 103 3.5 4.5 4.0 2.8 118 chr2L 21392196 3` UTR nrv3 + chr2L 21392255 3` UTR nrv3 + chr2L 21392314 3` UTR nrv3 + chr2L_14_21390001 chr2L_21390001 RAL-908 585 chr2L 21597027 21597037 chr2L 21604791 21604801 roo 4 7764 6.5 6.0 6.2 0.6 7774 chr2L 21597027 intergenic not near genes chr2L 21600914 intergenic not near genes chr2L 21604801 intergenic not near genes chr2L_4_21600001 chr2L_21600001 RAL-908 586 chr2L 21597041 21597063 chr2L 21604786 21604822 roo 6 7759 4.0 6.0 5.0 1.0 7781 chr2L 21597041 intergenic not near genes chr2L 21600932 intergenic not near genes chr2L 21604822 intergenic not near genes chr2L_6_21600001 chr2L_21600001 RAL-908 587 chr2L 21691806 21691858 chr2L 21698296 21698313 Burdock 18 6487 3.5 0.0 1.8 6.4 6507 chr2L 21691806 intron CG31619 + chr2L 21695060 intron CG31619 + chr2L 21698313 intron CG31619 + chr2L_18_21695001 chr2L_21695001 RAL-908 588 chr2L 21750081 21750131 chr2L 21750421 21750474 8 341 4.0 4.5 4.2 1.5 393 chr2L 21750081 intron step - chr2L 21750278 intron step - chr2L 21750474 intron step - chr2L_8_21750001 chr2L_21750001 RAL-908 589 chr2L 21754648 21754683 chr2L 21754749 21754784 10 101 7.5 4.5 6.0 1.4 136 chr2L 21754648 intron step - chr2L 21754716 intron step - chr2L 21754784 intron step - chr2L_10_21750001 chr2L_21750001 RAL-908 590 chr2L 21771974 21772009 chr2L 21772063 21772108 6 97 2.5 1.0 1.8 2.1 134 chr2L 21771974 intron CG31612 - chr2L 21772041 intron CG31612 - chr2L 21772108 intron CG31612 - chr2L_6_21770001 chr2L_21770001 RAL-908 591 chr2L 21798057 21798060 chr2L 21877528 21877531 4 79471 25.5 16.5 21.0 0.2 79474 chr2L 21798057 3` UTR CR44269 - chr2L 21837794 intergenic not near genes chr2L 21877531 intergenic not near genes chr2L_4_21835001 chr2L_21835001 RAL-908 592 chr2L 21819310 21819358 chr2L 21819418 21819466 11 106 5.0 4.0 4.5 2.0 156 chr2L 21819310 intergenic CR44786 + chr2L 21819388 intergenic CR44786 + chr2L 21819466 intergenic CR44786 + chr2L_11_21815001 chr2L_21815001 RAL-908 593 chr2L 21824107 21824152 chr2L 21824209 21824259 14 107 0.0 5.0 2.5 4.0 152 chr2L 21824107 intergenic not near genes chr2L 21824183 intergenic not near genes chr2L 21824259 intergenic not near genes chr2L_14_21820001 chr2L_21820001 RAL-908 594 chr2L 21953794 21953843 chr2L 21954675 21954724 15 881 28.5 31.5 30.0 0.5 930 chr2L 21953794 intergenic not near genes chr2L 21954259 intergenic not near genes chr2L 21954724 intergenic not near genes chr2L_15_21950001 chr2L_21950001 RAL-908 595 chr2L 21981665 21981711 chr2L 21990850 21990896 roo 12 9185 5.0 2.5 3.8 2.5 9231 chr2L 21981665 exon CG2528 - chr2L 21986280 intron CG2528 - chr2L 21990896 exon CG2528 - chr2L_12_21985001 chr2L_21985001 RAL-908 596 chr2L 21996921 21996972 chr2L 21997022 21997073 8 101 5.5 4.5 5.0 1.3 152 chr2L 21996921 intergenic not near genes chr2L 21996997 intergenic not near genes chr2L 21997073 intergenic not near genes chr2L_8_21995001 chr2L_21995001 RAL-908 597 chr2L 22001627 22001674 chr2L 22001723 22001766 8 96 1.0 3.0 2.0 2.7 139 chr2L 22001627 intergenic not near genes chr2L 22001696 intergenic not near genes chr2L 22001766 intergenic not near genes chr2L_8_22000001 chr2L_22000001 RAL-908 598 chr2L 22007916 22007951 chr2L 22008018 22008053 6 102 2.0 1.5 1.8 2.1 137 chr2L 22007916 intergenic not near genes chr2L 22007984 intergenic not near genes chr2L 22008053 intergenic not near genes chr2L_6_22005001 chr2L_22005001 RAL-908 599 chr2L 22025810 22025853 chr2L 22025906 22025952 14 97 3.0 3.5 3.2 3.3 142 chr2L 22025810 intergenic tio + chr2L 22025881 intergenic tio + chr2L 22025952 intergenic tio + chr2L_14_22025001 chr2L_22025001 RAL-908 600 chr2L 22107353 22107373 chr2L 22107500 22107520 7 147 10.5 1.5 6.0 1.0 167 chr2L 22107353 intergenic CG10834 - chr2L 22107436 intergenic CG10834 - chr2L 22107520 intergenic CG10834 - chr2L_7_22105001 chr2L_22105001 RAL-908 601 chr2L 22212119 22212154 chr2L 22212686 22212721 9 566 3.5 5.0 4.2 1.7 602 chr2L 22212119 intron Ir40a - chr2L 22212420 intron Ir40a - chr2L 22212721 intron Ir40a - chr2L_9_22210001 chr2L_22210001 RAL-908 602 chr2L 22215890 22215927 chr2L 22215996 22216033 10 105 5.0 7.0 6.0 1.4 143 chr2L 22215890 intergenic not near genes chr2L 22215962 intergenic not near genes chr2L 22216033 intergenic not near genes chr2L_10_22215001 chr2L_22215001 RAL-908 603 chr2L 22239415 22239456 chr2L 22239516 22239557 8 99 2.5 5.5 4.0 1.6 142 chr2L 22239415 intron CR43765 - chr2L 22239486 3` UTR CR43765 - chr2L 22239557 3` UTR CR43765 - chr2L_8_22235001 chr2L_22235001 RAL-908 604 chr2L 22258605 22258638 chr2L 22260744 22260782 G6 15 2143 4.5 3.5 4.0 3.0 2177 chr2L 22258605 intergenic Tif-IA + chr2L 22259694 intergenic not near genes chr2L 22260782 intergenic not near genes chr2L_15_22255001 chr2L_22255001 RAL-908 605 chr2L 22294339 22294385 chr2L 22294447 22294493 8 108 3.5 3.5 3.5 1.8 154 chr2L 22294339 intergenic not near genes chr2L 22294416 intergenic not near genes chr2L 22294493 intergenic not near genes chr2L_8_22290001 chr2L_22290001 RAL-908 606 chr2L 22548921 22548941 chr2L 22550166 22550176 1360 5 1243 0.0 10.0 5.0 0.8 1255 chr2L 22548921 intergenic CG17490 + chr2L 22549548 intergenic not near genes chr2L 22550176 intergenic CG17493 + chr2L_5_22545001 chr2L_22545001 RAL-908 607 chr2L 22581952 22582002 chr2L 22583761 22583811 S-element 10 1806 7.5 4.5 6.0 1.4 1859 chr2L 22581952 intron CG17494 + chr2L 22582882 intron CG17494 + chr2L 22583811 intron CG17494 + chr2L_10_22580001 chr2L_22580001 RAL-908 608 chr2L 22706816 22706838 chr2L 22706919 22706961 7 120 3.5 4.5 4.0 1.4 145 chr2L 22706816 intron CG40006 - chr2L 22706888 intron CG40006 - chr2L 22706961 intron CG40006 - chr2L_7_22705001 chr2L_22705001 RAL-908 609 chr2L 22776401 22776451 chr2L 22778210 22778260 S-element 17 1809 6.5 4.0 5.2 2.7 1859 chr2L 22776401 intergenic not near genes chr2L 22777330 intergenic not near genes chr2L 22778260 intergenic not near genes chr2L_17_22775001 chr2L_22775001 RAL-908 610 chr2L 23181379 23181413 chr2L 23181508 23181534 12 128 10.5 6.0 8.2 1.3 155 chr2L 23181379 intergenic not near genes chr2L 23181456 intergenic not near genes chr2L 23181534 intergenic not near genes chr2L_12_23180001 chr2L_23180001 RAL-908 611 chr2R 469949 469982 chr2R 473206 473212 F-element 8 3250 3.0 4.0 3.5 1.8 3263 chr2R 469949 intergenic not near genes chr2R 471580 intergenic not near genes chr2R 473212 intergenic not near genes chr2R_8_470001 chr2R_470001 RAL-908 612 chr2R 1516585 1516602 chr2R 1521333 1521350 1731 19 4748 39.5 37.5 38.5 0.5 4765 chr2R 1516585 exon Maf1 - chr2R 1518968 intron Maf1 - chr2R 1521350 5` UTR Maf1 - chr2R_19_1515001 chr2R_1515001 RAL-908 613 chr2R 1919579 1919604 chr2R 1920035 1920060 5 457 17.5 21.5 19.5 0.2 481 chr2R 1919579 intron CG17684 - chr2R 1919820 intron CG17684 - chr2R 1920060 intron CG17684 - chr2R_5_1915001 chr2R_1915001 RAL-908 614 chr2R 2498964 2499009 chr2R 2508131 2508176 roo 8 9166 3.0 7.0 5.0 1.3 9212 chr2R 2498964 intron MFS17 - chr2R 2503570 intron MFS17 - chr2R 2508176 intron MFS17 - chr2R_8_2500001 chr2R_2500001 RAL-908 615 chr2R 1373052 1373062 chr2R 2589330 2589340 Cr1a 4 1216278 20.5 24.0 22.2 0.2 1216288 chr2R 1373052 intron l(2)41Ab + chr2R 1981196 intron CG17684 - chr2R 2589340 intergenic not near genes chr2R_4_1980001 chr2R_1980001 RAL-908 616 chr2R 3144067 3144106 chr2R 3393365 3393403 Doc 6 249295 17.0 15.5 16.2 0.3 249336 chr2R 3144067 intron CG42596 + chr2R 3268735 intergenic not near genes chr2R 3393403 intergenic not near genes chr2R_6_3265001 chr2R_3265001 RAL-908 617 chr2R 3293728 3293751 chr2R 3293826 3293849 5 98 4.0 1.5 2.8 1.3 121 chr2R 3293728 intergenic not near genes chr2R 3293788 intergenic not near genes chr2R 3293849 intergenic not near genes chr2R_5_3290001 chr2R_3290001 RAL-908 618 chr2R 3532599 3532626 chr2R 3536062 3536089 Doc 4 3463 5.5 3.0 4.2 0.8 3490 chr2R 3532599 intergenic not near genes chr2R 3534344 intergenic not near genes chr2R 3536089 intergenic not near genes chr2R_4_3530001 chr2R_3530001 RAL-908 619 chr2R 4580180 4580227 chr2R 4580827 4580874 12 646 4.5 5.0 4.8 2.1 694 chr2R 4580180 intergenic not near genes chr2R 4580527 intergenic not near genes chr2R 4580874 intergenic not near genes chr2R_12_4580001 chr2R_4580001 RAL-908 620 chr2R 4604534 4604574 chr2R 4604633 4604672 8 96 2.0 5.5 3.8 1.7 138 chr2R 4604534 intron p120ctn + chr2R 4604603 intron p120ctn + chr2R 4604672 intron p120ctn + chr2R_8_4600001 chr2R_4600001 RAL-908 621 chr2R 4622947 4622988 chr2R 4624126 4624167 1360 13 1177 3.5 5.5 4.5 2.4 1220 chr2R 4622947 intergenic CR44101 - chr2R 4623557 intergenic not near genes chr2R 4624167 intergenic not near genes chr2R_13_4620001 chr2R_4620001 RAL-908 622 chr2R 4688110 4688130 chr2R 4688223 4688243 6 113 3.0 9.5 6.2 0.8 133 chr2R 4688110 intergenic not near genes chr2R 4688176 intergenic not near genes chr2R 4688243 intergenic not near genes chr2R_6_4685001 chr2R_4685001 RAL-908 623 chr2R 4750320 4750376 chr2R 4751497 4751506 1360 12 1171 1.5 4.0 2.8 3.2 1186 chr2R 4750320 intron conu + chr2R 4750913 intron conu + chr2R 4751506 intron conu + chr2R_12_4750001 chr2R_4750001 RAL-908 624 chr2R 4819831 4819874 chr2R 4819929 4819983 11 106 4.0 4.0 4.0 2.2 152 chr2R 4819831 exon CG17528 - chr2R 4819907 exon CG17528 - chr2R 4819983 intron CG17528 - chr2R_11_4815001 chr2R_4815001 RAL-908 625 chr2R 4955612 4955648 chr2R 4955724 4955751 10 117 3.5 1.5 2.5 2.9 139 chr2R 4955612 intron Ir41a + chr2R 4955682 intron Ir41a + chr2R 4955751 intron Ir41a + chr2R_10_4955001 chr2R_4955001 RAL-908 626 chr2R 5075209 5075245 chr2R 5075357 5075363 5 140 4.0 0.0 2.0 1.7 154 chr2R 5075209 intergenic not near genes chr2R 5075286 intergenic not near genes chr2R 5075363 intergenic not near genes chr2R_5_5075001 chr2R_5075001 RAL-908 627 chr2R 5075246 5075358 chr2R 5075757 5075776 11 446 0.0 1.5 0.8 6.1 530 chr2R 5075246 intergenic not near genes chr2R 5075511 intergenic not near genes chr2R 5075776 intergenic not near genes chr2R_11_5075001 chr2R_5075001 RAL-908 628 chr2R 5080773 5080817 chr2R 5080879 5080928 10 106 2.5 2.5 2.5 2.9 155 chr2R 5080773 intergenic not near genes chr2R 5080850 intergenic not near genes chr2R 5080928 intergenic not near genes chr2R_10_5080001 chr2R_5080001 RAL-908 629 chr2R 5125227 5125271 chr2R 5125565 5125608 11 338 3.5 4.0 3.8 2.3 381 chr2R 5125227 intron gus - chr2R 5125418 intron gus - chr2R 5125608 intron gus - chr2R_11_5125001 chr2R_5125001 RAL-908 630 chr2R 5237087 5237127 chr2R 5237183 5237223 12 96 5.5 3.0 4.2 2.3 136 chr2R 5237087 intron Nipped-A - chr2R 5237155 intron Nipped-A - chr2R 5237223 intron Nipped-A - chr2R_12_5235001 chr2R_5235001 RAL-908 631 chr2R 5266103 5266268 chr2R 5266206 5266375 21 102 49.0 51.5 50.2 0.4 272 chr2R 5266103 intron d4 + chr2R 5266239 intron d4 + chr2R 5266375 intron d4 + chr2R_21_5265001 chr2R_5265001 RAL-908 632 chr2R 5363473 5363518 chr2R 5363571 5363616 11 98 6.0 4.5 5.2 1.8 143 chr2R 5363473 5` UTR CR42646 + chr2R 5363544 intron CR42646 + chr2R 5363616 intron CR42646 + chr2R_11_5360001 chr2R_5360001 RAL-908 633 chr2R 5417975 5418027 chr2R 5420627 5420679 Burdock 22 2651 3.5 5.5 4.5 4.0 2704 chr2R 5417975 intron laccase2 + chr2R 5419327 intron laccase2 + chr2R 5420679 intron laccase2 + chr2R_22_5415001 chr2R_5415001 RAL-908 634 chr2R 5460502 5460553 chr2R 5460626 5460677 12 117 3.5 5.5 4.5 2.2 175 chr2R 5460502 intergenic not near genes chr2R 5460590 intergenic not near genes chr2R 5460677 intergenic not near genes chr2R_12_5460001 chr2R_5460001 RAL-908 635 chr2R 5491663 5491691 chr2R 5491772 5491804 5 111 2.0 6.5 4.2 1.0 141 chr2R 5491663 intron CG30440 - chr2R 5491734 intron CG30440 - chr2R 5491804 intron CG30440 - chr2R_5_5490001 chr2R_5490001 RAL-908 636 chr2R 5543205 5543221 chr2R 5547309 5547324 invader1 11 4104 0.0 20.0 10.0 1.0 4119 chr2R 5543205 intron CG30438 + chr2R 5545264 intron CG30438 + chr2R 5547324 intron CG30438 + chr2R_11_5545001 chr2R_5545001 RAL-908 637 chr2R 5581404 5581421 chr2R 5627633 5627650 8 46228 2.0 13.5 7.8 0.9 46246 chr2R 5581404 intergenic not near genes chr2R 5604527 intron Fis1 - chr2R 5627650 intergenic not near genes chr2R_8_5600001 chr2R_5600001 RAL-908 638 chr2R 5750098 5750134 chr2R 5750449 5750451 4 342 4.0 0.0 2.0 1.3 353 chr2R 5750098 intergenic not near genes chr2R 5750274 intergenic not near genes chr2R 5750451 intergenic not near genes chr2R_4_5750001 chr2R_5750001 RAL-908 639 chr2R 5772508 5772547 chr2R 5772622 5772661 8 112 4.5 4.5 4.5 1.5 153 chr2R 5772508 3` UTR Gp210 + chr2R 5772584 3` UTR Gp210 + chr2R 5772661 3` UTR Gp210 + chr2R_8_5770001 chr2R_5770001 RAL-908 640 chr2R 5772827 5772857 chr2R 5772929 5772959 11 102 4.5 6.0 5.2 1.8 132 chr2R 5772827 3` UTR Gp210 + chr2R 5772893 3` UTR Gp210 + chr2R 5772959 3` UTR Gp210 + chr2R_11_5770001 chr2R_5770001 RAL-908 641 chr2R 5790449 5790491 chr2R 5790554 5790596 13 103 4.5 4.5 4.5 2.4 147 chr2R 5790449 intergenic not near genes chr2R 5790522 intergenic not near genes chr2R 5790596 intergenic not near genes chr2R_13_5790001 chr2R_5790001 RAL-908 642 chr2R 5859971 5860010 chr2R 5860092 5860142 10 130 6.0 2.5 4.2 1.9 171 chr2R 5859971 3` UTR dpr12 + chr2R 5860056 3` UTR dpr12 + chr2R 5860142 3` UTR dpr12 + chr2R_10_5860001 chr2R_5860001 RAL-908 643 chr2R 5861279 5861317 chr2R 5861410 5861451 5 137 2.5 2.5 2.5 1.4 172 chr2R 5861279 intergenic dpr12 + chr2R 5861365 intergenic not near genes chr2R 5861451 intergenic not near genes chr2R_5_5860001 chr2R_5860001 RAL-908 644 chr2R 5869256 5869306 chr2R 5874352 5874402 flea 11 5093 4.5 5.0 4.8 1.9 5146 chr2R 5869256 intergenic not near genes chr2R 5871829 intergenic not near genes chr2R 5874402 intergenic not near genes chr2R_11_5870001 chr2R_5870001 RAL-908 645 chr2R 5876854 5876904 chr2R 5876976 5877026 11 120 1.5 1.5 1.5 4.4 172 chr2R 5876854 intergenic not near genes chr2R 5876940 intergenic not near genes chr2R 5877026 intergenic not near genes chr2R_11_5875001 chr2R_5875001 RAL-908 646 chr2R 5878900 5878957 chr2R 5879003 5879057 12 102 5.0 2.5 3.8 2.5 157 chr2R 5878900 intergenic CG44438 - chr2R 5878978 intergenic CG44438 - chr2R 5879057 intergenic CG44438 - chr2R_12_5875001 chr2R_5875001 RAL-908 647 chr2R 5885349 5885378 chr2R 5885498 5885527 9 149 2.0 5.0 3.5 2.0 178 chr2R 5885349 5` UTR CR44125 + chr2R 5885438 5` UTR CR44125 + chr2R 5885527 5` UTR CR44125 + chr2R_9_5885001 chr2R_5885001 RAL-908 648 chr2R 5902142 5902179 chr2R 5909721 5909726 17.6 6 7574 4.0 4.5 4.2 1.2 7584 chr2R 5902142 intron CG43366 + chr2R 5905934 intron CG43366 + chr2R 5909726 intron CG43366 + chr2R_6_5905001 chr2R_5905001 RAL-908 649 chr2R 6033442 6033472 chr2R 6033532 6033577 6 97 4.5 3.5 4.0 1.2 135 chr2R 6033442 intron SCAP - chr2R 6033510 intron SCAP - chr2R 6033577 intron SCAP - chr2R_6_6030001 chr2R_6030001 RAL-908 650 chr2R 6096720 6096731 chr2R 6101918 6101946 BS 4 5211 4.5 3.0 3.8 0.8 5226 chr2R 6096720 intron EcR - chr2R 6099333 intron EcR - chr2R 6101946 intron EcR - chr2R_4_6095001 chr2R_6095001 RAL-908 651 chr2R 6129319 6129358 chr2R 6129404 6129456 12 94 2.5 1.5 2.0 4.0 137 chr2R 6129319 intron EcR - chr2R 6129388 intron EcR - chr2R 6129456 intron EcR - chr2R_12_6125001 chr2R_6125001 RAL-908 652 chr2R 6135990 6136026 chr2R 6136841 6136877 13 849 3.5 6.5 5.0 2.2 887 chr2R 6135990 intron EcR - chr2R 6136434 intron EcR - chr2R 6136877 intron EcR - chr2R_13_6135001 chr2R_6135001 RAL-908 653 chr2R 6178101 6178142 chr2R 6178247 6178288 11 145 6.0 4.5 5.2 1.8 187 chr2R 6178101 intergenic not near genes chr2R 6178194 intergenic not near genes chr2R 6178288 intergenic not near genes chr2R_11_6175001 chr2R_6175001 RAL-908 654 chr2R 6194667 6194691 chr2R 6194770 6194794 8 103 7.5 5.0 6.2 1.1 127 chr2R 6194667 intron Ptr - chr2R 6194730 intron Ptr - chr2R 6194794 intron Ptr - chr2R_8_6190001 chr2R_6190001 RAL-908 655 chr2R 6494516 6494546 chr2R 6499298 6499328 F-element 9 4781 4.0 7.0 5.5 1.4 4812 chr2R 6494516 intergenic not near genes chr2R 6496922 intergenic not near genes chr2R 6499328 intergenic not near genes chr2R_9_6495001 chr2R_6495001 RAL-908 656 chr2R 6539830 6539851 chr2R 6539965 6539986 6 135 2.0 3.0 2.5 1.7 156 chr2R 6539830 intron jing + chr2R 6539908 intron jing + chr2R 6539986 intron jing + chr2R_6_6535001 chr2R_6535001 RAL-908 657 chr2R 6579754 6579794 chr2R 6584860 6584900 flea 13 5106 12.5 8.0 10.2 1.2 5146 chr2R 6579754 intron jing + chr2R 6582327 intron jing + chr2R 6584900 intron jing + chr2R_13_6580001 chr2R_6580001 RAL-908 658 chr2R 6664171 6664200 chr2R 6665992 6666021 S-element 12 1821 9.5 4.0 6.8 1.5 1850 chr2R 6664171 intron,3` UTR Adf1 +,CR45128 - chr2R 6665096 intron Adf1 + chr2R 6666021 intron Adf1 + chr2R_12_6665001 chr2R_6665001 RAL-908 659 chr2R 6699573 6699619 chr2R 6699678 6699724 26 104 6.0 5.0 5.5 4.0 151 chr2R 6699573 intergenic Rab2 + chr2R 6699648 intergenic Rab2 + chr2R 6699724 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_26_6695001 chr2R_6695001 RAL-908 660 chr2R 6706951 6706997 chr2R 6707232 6707277 10 280 0.5 3.5 2.0 3.3 326 chr2R 6706951 intron,intron CG3409 -,CG45092 - chr2R 6707114 intron,intron CG3409 -,CG45092 - chr2R 6707277 intron,intron CG3409 -,CG45092 - chr2R_10_6705001 chr2R_6705001 RAL-908 661 chr2R 6712573 6712599 chr2R 6712690 6712716 7 115 4.5 3.5 4.0 1.4 143 chr2R 6712573 intron,intron CG3409 -,CG45092 - chr2R 6712644 intron,intron CG3409 -,CG45092 - chr2R 6712716 intron,intron CG3409 -,CG45092 - chr2R_7_6710001 chr2R_6710001 RAL-908 662 chr2R 6738827 6738874 chr2R 6738929 6738976 12 101 5.0 5.0 5.0 2.0 149 chr2R 6738827 intron l(2)01289 - chr2R 6738902 intron l(2)01289 - chr2R 6738976 intron l(2)01289 - chr2R_12_6735001 chr2R_6735001 RAL-908 663 chr2R 6865670 6865720 chr2R 6865785 6865835 17 115 3.0 5.5 4.2 3.3 165 chr2R 6865670 intron coro - chr2R 6865752 intron coro - chr2R 6865835 intron coro - chr2R_17_6865001 chr2R_6865001 RAL-908 664 chr2R 6876202 6876251 chr2R 6876304 6876353 20 99 5.5 4.0 4.8 3.4 151 chr2R 6876202 intron,intron CR44169 +,Spn42Da - chr2R 6876278 5` UTR,intron CR44169 +,Spn42Da - chr2R 6876353 5` UTR,intron CR44169 +,Spn42Da - chr2R_20_6875001 chr2R_6875001 RAL-908 665 chr2R 6910195 6910213 chr2R 6910381 6910421 8 202 3.0 2.5 2.8 2.1 226 chr2R 6910195 intron CG30158 + chr2R 6910308 intron CG30158 + chr2R 6910421 intron CG30158 + chr2R_8_6910001 chr2R_6910001 RAL-908 666 chr2R 6925837 6925881 chr2R 6925936 6925975 9 98 6.5 4.0 5.2 1.5 138 chr2R 6925837 3` UTR mim - chr2R 6925906 3` UTR mim - chr2R 6925975 3` UTR mim - chr2R_9_6925001 chr2R_6925001 RAL-908 667 chr2R 6948062 6948105 chr2R 6948158 6948200 17 96 6.0 6.0 6.0 2.4 138 chr2R 6948062 intron,intron mim -,CheB42c - chr2R 6948131 intron,intron mim -,CheB42c - chr2R 6948200 intron,intron mim -,CheB42c - chr2R_17_6945001 chr2R_6945001 RAL-908 668 chr2R 6952152 6952172 chr2R 6959756 6959776 opus 8 7604 4.0 8.5 6.2 1.1 7624 chr2R 6952152 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955964 intron,intron mim -,CheB42c - chr2R 6959776 intron,intron mim -,CheB42c - chr2R_8_6955001 chr2R_6955001 RAL-908 669 chr2R 6964262 6964316 chr2R 6964359 6964403 10 95 3.5 5.0 4.2 1.9 141 chr2R 6964262 intron,intron mim -,CheB42c - chr2R 6964332 intron,intron mim -,CheB42c - chr2R 6964403 intron,intron mim -,CheB42c - chr2R_10_6960001 chr2R_6960001 RAL-908 670 chr2R 7025912 7025928 chr2R 7026020 7026035 5 107 1.5 5.5 3.5 1.1 123 chr2R 7025912 intron Tsp42Ef + chr2R 7025974 intron Tsp42Ef + chr2R 7026035 intron Tsp42Ef + chr2R_5_7025001 chr2R_7025001 RAL-908 671 chr2R 7029691 7029736 chr2R 7029802 7029847 6 111 0.0 2.0 1.0 3.0 156 chr2R 7029691 intron Tsp42Eg + chr2R 7029769 intron Tsp42Eg + chr2R 7029847 intron Tsp42Eg + chr2R_6_7025001 chr2R_7025001 RAL-908 672 chr2R 7076373 7076417 chr2R 7076478 7076522 14 105 6.0 2.0 4.0 2.8 149 chr2R 7076373 intergenic not near genes chr2R 7076448 intergenic not near genes chr2R 7076522 intergenic not near genes chr2R_14_7075001 chr2R_7075001 RAL-908 673 chr2R 7091198 7091243 chr2R 7091300 7091345 19 102 4.5 8.5 6.5 2.5 147 chr2R 7091198 intron esn + chr2R 7091272 intron esn + chr2R 7091345 intron esn + chr2R_19_7090001 chr2R_7090001 RAL-908 674 chr2R 7128759 7128776 chr2R 7129036 7129066 7 287 1.5 5.0 3.2 1.7 307 chr2R 7128759 exon Cyp9b1 - chr2R 7128912 exon Cyp9b1 - chr2R 7129066 exon Cyp9b1 - chr2R_7_7125001 chr2R_7125001 RAL-908 675 chr2R 7196550 7196592 chr2R 7201345 7201387 F-element 12 4795 4.0 4.0 4.0 2.4 4837 chr2R 7196550 intron pk + chr2R 7198968 intron pk + chr2R 7201387 intron pk + chr2R_12_7195001 chr2R_7195001 RAL-908 676 chr2R 7209847 7209871 chr2R 7217615 7217639 roo 13 7768 3.5 11.5 7.5 1.5 7792 chr2R 7209847 intron pk + chr2R 7213743 intron pk + chr2R 7217639 intron pk + chr2R_13_7210001 chr2R_7210001 RAL-908 677 chr2R 7235802 7235840 chr2R 7240913 7240947 jockey 4 5110 2.0 1.0 1.5 1.6 5145 chr2R 7235802 intergenic not near genes chr2R 7238374 intergenic not near genes chr2R 7240947 intergenic not near genes chr2R_4_7235001 chr2R_7235001 RAL-908 678 chr2R 7254787 7254826 chr2R 7254922 7254961 9 134 2.0 1.5 1.8 3.2 174 chr2R 7254787 5` UTR CR45280 + chr2R 7254874 5` UTR CR45280 + chr2R 7254961 5` UTR CR45280 + chr2R_9_7250001 chr2R_7250001 RAL-908 679 chr2R 7310751 7310794 chr2R 7310848 7310896 5 101 2.5 3.0 2.8 1.3 145 chr2R 7310751 intergenic not near genes chr2R 7310824 intergenic not near genes chr2R 7310896 intergenic CG12164 + chr2R_5_7310001 chr2R_7310001 RAL-908 680 chr2R 7328110 7328147 chr2R 7328241 7328278 14 131 5.5 5.5 5.5 2.2 168 chr2R 7328110 intron,intron Dscam1 -,CR45129 + chr2R 7328194 intron,intron Dscam1 -,CR45129 + chr2R 7328278 intron,intron Dscam1 -,CR45129 + chr2R_14_7325001 chr2R_7325001 RAL-908 681 chr2R 7389550 7389599 chr2R 7389672 7389721 14 122 2.0 5.5 3.8 2.9 171 chr2R 7389550 intron CG11107 + chr2R 7389636 intron CG11107 + chr2R 7389721 intron CG11107 + chr2R_14_7385001 chr2R_7385001 RAL-908 682 chr2R 7417901 7418169 chr2R 7418007 7418268 24 99 2.5 8.5 5.5 3.7 367 chr2R 7417901 intergenic not near genes chr2R 7418084 intergenic not near genes chr2R 7418268 intergenic not near genes chr2R_24_7415001 chr2R_7415001 RAL-908 683 chr2R 7434878 7434905 chr2R 7439198 7439226 Juan 11 4321 10.0 7.5 8.8 1.1 4348 chr2R 7434878 intergenic so + chr2R 7437052 intergenic not near genes chr2R 7439226 intergenic not near genes chr2R_11_7435001 chr2R_7435001 RAL-908 684 chr2R 7459261 7459286 chr2R 7459369 7459391 5 107 10.5 5.5 8.0 0.6 130 chr2R 7459261 intergenic Inos -,CG11141 - chr2R 7459326 intergenic CG11141 -,Inos - chr2R 7459391 intergenic CG11141 - chr2R_5_7455001 chr2R_7455001 RAL-908 685 chr2R 7551667 7551714 chr2R 7551778 7551825 12 111 4.0 2.5 3.2 2.9 158 chr2R 7551667 intron Corin + chr2R 7551746 intron Corin + chr2R 7551825 intron Corin + chr2R_12_7550001 chr2R_7550001 RAL-908 686 chr2R 7562748 7562754 chr2R 7562850 7562856 4 102 11.5 8.5 10.0 0.4 108 chr2R 7562748 3` UTR Corin + chr2R 7562802 3` UTR Corin + chr2R 7562856 3` UTR Corin + chr2R_4_7560001 chr2R_7560001 RAL-908 687 chr2R 7608398 7608445 chr2R 7613621 7613667 I-element 10 5222 2.5 0.0 1.2 4.5 5269 chr2R 7608398 intron CG1358 - chr2R 7611032 intron CG1358 - chr2R 7613667 intron CG1358 - chr2R_10_7610001 chr2R_7610001 RAL-908 688 chr2R 7623790 7623845 chr2R 7623997 7624052 15 205 4.0 4.0 4.0 3.0 262 chr2R 7623790 intron CG43340 + chr2R 7623921 intron CG43340 + chr2R 7624052 intron CG43340 + chr2R_15_7620001 chr2R_7620001 RAL-908 689 chr2R 7812223 7812269 chr2R 7812318 7812365 15 96 4.0 4.5 4.2 2.9 142 chr2R 7812223 intergenic CG1550 -,CG1882 + chr2R 7812294 intergenic CG1882 +,CG1550 - chr2R 7812365 intergenic CG1882 +,CG1550 - chr2R_15_7810001 chr2R_7810001 RAL-908 690 chr2R 7815652 7815705 chr2R 7822141 7822194 Burdock 17 6489 4.5 6.0 5.2 2.7 6542 chr2R 7815652 intergenic CG1882 + chr2R 7818923 intergenic not near genes chr2R 7822194 3` UTR cathD - chr2R_17_7815001 chr2R_7815001 RAL-908 691 chr2R 7869174 7869205 chr2R 7873980 7874011 Doc 4 4806 7.0 3.5 5.2 0.6 4837 chr2R 7869174 intron Dgk - chr2R 7871592 intron Dgk - chr2R 7874011 intron Dgk - chr2R_4_7870001 chr2R_7870001 RAL-908 692 chr2R 7897136 7897150 chr2R 7897245 7897259 7 108 0.0 5.5 2.8 1.8 123 chr2R 7897136 intron CG30377 + chr2R 7897198 intron CG30377 + chr2R 7897259 intron CG30377 + chr2R_7_7895001 chr2R_7895001 RAL-908 693 chr2R 7969180 7969230 chr2R 7969801 7969853 15 622 3.0 1.5 2.2 4.7 673 chr2R 7969180 intron,3` UTR nito +,CG8726 - chr2R 7969516 intron,intron nito +,CG8726 - chr2R 7969853 exon CG8726 - chr2R_15_7965001 chr2R_7965001 RAL-908 694 chr2R 8026795 8026801 chr2R 8026891 8026897 4 96 14.0 7.5 10.8 0.3 102 chr2R 8026795 intergenic CR45267 + chr2R 8026846 intergenic CR45267 + chr2R 8026897 intergenic CR45267 + chr2R_4_8025001 chr2R_8025001 RAL-908 695 chr2R 8026802 8026837 chr2R 8026888 8026933 6 94 6.5 6.5 6.5 0.8 131 chr2R 8026802 intergenic CR45267 + chr2R 8026868 intergenic CR45267 + chr2R 8026933 intergenic CR45267 + chr2R_6_8025001 chr2R_8025001 RAL-908 696 chr2R 8067046 8067090 chr2R 8067150 8067194 10 104 4.5 9.0 6.8 1.3 148 chr2R 8067046 intron CG17977 - chr2R 8067120 intron CG17977 - chr2R 8067194 exon CG17977 - chr2R_10_8065001 chr2R_8065001 RAL-908 697 chr2R 8076660 8076709 chr2R 8076760 8076809 19 99 1.0 6.0 3.5 4.2 149 chr2R 8076660 intron lig + chr2R 8076734 intron lig + chr2R 8076809 intron lig + chr2R_19_8075001 chr2R_8075001 RAL-908 698 chr2R 8089239 8089288 chr2R 8089345 8089371 17 105 5.0 4.5 4.8 2.9 132 chr2R 8089239 3` UTR sut2 + chr2R 8089305 intergenic sut2 +,sut3 + chr2R 8089371 intergenic sut2 +,sut3 + chr2R_17_8085001 chr2R_8085001 RAL-908 699 chr2R 8114017 8114060 chr2R 8114121 8114169 18 108 0.0 5.0 2.5 5.1 152 chr2R 8114017 intergenic Asap - chr2R 8114093 intergenic Asap - chr2R 8114169 intergenic Asap - chr2R_18_8110001 chr2R_8110001 RAL-908 700 chr2R 8151189 8151226 chr2R 8151321 8151358 13 130 2.5 5.5 4.0 2.6 169 chr2R 8151189 intron,intron Lpin -,kermit - chr2R 8151274 intron,intron Lpin -,kermit - chr2R 8151358 intron,intron Lpin -,kermit - chr2R_13_8150001 chr2R_8150001 RAL-908 701 chr2R 8155577 8155614 chr2R 8155673 8155723 11 107 1.0 2.5 1.8 3.9 146 chr2R 8155577 intron,intron Lpin -,kermit - chr2R 8155650 intron,intron Lpin -,kermit - chr2R 8155723 intron,intron Lpin -,kermit - chr2R_11_8155001 chr2R_8155001 RAL-908 702 chr2R 8157883 8157897 chr2R 8157991 8158003 5 108 4.5 3.5 4.0 1.0 120 chr2R 8157883 5` UTR CR44068 + chr2R 8157943 5` UTR CR44068 + chr2R 8158003 5` UTR CR44068 + chr2R_5_8155001 chr2R_8155001 RAL-908 703 chr2R 8187311 8187350 chr2R 8187417 8187457 10 106 5.5 1.0 3.2 2.4 146 chr2R 8187311 intron LRP1 + chr2R 8187384 intron LRP1 + chr2R 8187457 intron LRP1 + chr2R_10_8185001 chr2R_8185001 RAL-908 704 chr2R 8236016 8236060 chr2R 8236117 8236160 13 100 3.5 4.5 4.0 2.6 144 chr2R 8236016 intergenic not near genes chr2R 8236088 intergenic not near genes chr2R 8236160 intergenic not near genes chr2R_13_8235001 chr2R_8235001 RAL-908 705 chr2R 8270370 8270401 chr2R 8270450 8270499 7 90 5.0 2.0 3.5 1.6 129 chr2R 8270370 intergenic not near genes chr2R 8270434 intergenic not near genes chr2R 8270499 intergenic not near genes chr2R_7_8270001 chr2R_8270001 RAL-908 706 chr2R 8330844 8330889 chr2R 8331350 8331395 roo 10 506 1.0 3.0 2.0 3.3 551 chr2R 8330844 intron pdm3 + chr2R 8331120 intron pdm3 + chr2R 8331395 intron pdm3 + chr2R_10_8330001 chr2R_8330001 RAL-908 707 chr2R 8398196 8398241 chr2R 8402997 8403035 Doc 7 4797 3.5 1.0 2.2 2.2 4839 chr2R 8398196 intron CG2121 - chr2R 8400616 intron CG2121 - chr2R 8403035 intron CG2121 - chr2R_7_8400001 chr2R_8400001 RAL-908 708 chr2R 8403420 8403455 chr2R 8403523 8403558 12 103 1.0 4.0 2.5 3.4 138 chr2R 8403420 intron CG2121 - chr2R 8403489 intron CG2121 - chr2R 8403558 intron CG2121 - chr2R_12_8400001 chr2R_8400001 RAL-908 709 chr2R 8403640 8403670 chr2R 8403837 8403867 6 197 4.0 2.5 3.2 1.4 227 chr2R 8403640 intron CG2121 - chr2R 8403754 intron CG2121 - chr2R 8403867 intron CG2121 - chr2R_6_8400001 chr2R_8400001 RAL-908 710 chr2R 8411386 8411417 chr2R 8412732 8412763 9 1346 14.0 29.5 21.8 0.4 1377 chr2R 8411386 intron CG2121 - chr2R 8412074 intergenic CG2121 - chr2R 8412763 intergenic not near genes chr2R_9_8410001 chr2R_8410001 RAL-908 711 chr2R 8411134 8411181 chr2R 8413289 8413331 17 2151 26.0 39.0 32.5 0.5 2197 chr2R 8411134 intron CG2121 - chr2R 8412232 intergenic CG2121 - chr2R 8413331 intergenic not near genes chr2R_17_8410001 chr2R_8410001 RAL-908 712 chr2R 8452880 8452926 chr2R 8452981 8453027 18 100 5.0 3.5 4.2 3.5 147 chr2R 8452880 intergenic not near genes chr2R 8452954 intergenic not near genes chr2R 8453027 intergenic not near genes chr2R_18_8450001 chr2R_8450001 RAL-908 713 chr2R 8453068 8453079 chr2R 8453504 8453515 5 436 9.5 4.0 6.8 0.6 447 chr2R 8453068 intergenic not near genes chr2R 8453292 intergenic Mal-A2 + chr2R 8453515 intergenic Mal-A2 + chr2R_5_8450001 chr2R_8450001 RAL-908 714 chr2R 8453082 8453103 chr2R 8453501 8453539 11 434 7.0 3.5 5.2 1.8 457 chr2R 8453082 intergenic not near genes chr2R 8453310 intergenic Mal-A2 + chr2R 8453539 intergenic Mal-A2 + chr2R_11_8450001 chr2R_8450001 RAL-908 715 chr2R 8480922 8480968 chr2R 8481066 8481112 20 144 7.0 9.0 8.0 2.2 190 chr2R 8480922 intron mtt - chr2R 8481017 intron mtt - chr2R 8481112 intron mtt - chr2R_20_8480001 chr2R_8480001 RAL-908 716 chr2R 8483944 8483979 chr2R 8484040 8484075 16 96 5.0 4.5 4.8 2.8 131 chr2R 8483944 intron mtt - chr2R 8484010 intron mtt - chr2R 8484075 intron mtt - chr2R_16_8480001 chr2R_8480001 RAL-908 717 chr2R 8501127 8501152 chr2R 8501237 8501264 9 112 3.5 0.0 1.8 3.2 137 chr2R 8501127 intron mtt - chr2R 8501196 intron mtt - chr2R 8501264 intron mtt - chr2R_9_8500001 chr2R_8500001 RAL-908 718 chr2R 8508758 8508790 chr2R 8508841 8508893 4 92 1.0 2.5 1.8 1.4 135 chr2R 8508758 intron mtt - chr2R 8508826 intron mtt - chr2R 8508893 intron mtt - chr2R_4_8505001 chr2R_8505001 RAL-908 719 chr2R 8524052 8524100 chr2R 8524148 8524183 16 98 2.0 1.0 1.5 6.4 131 chr2R 8524052 intron mtt - chr2R 8524118 intron mtt - chr2R 8524183 intron mtt - chr2R_16_8520001 chr2R_8520001 RAL-908 720 chr2R 8566050 8566056 chr2R 8567016 8567017 1360 4 965 7.5 7.5 7.5 0.5 967 chr2R 8566050 5` UTR Cyp6a14 - chr2R 8566534 5` UTR Cyp6a14 - chr2R 8567017 5` UTR Cyp6a14 - chr2R_4_8565001 chr2R_8565001 RAL-908 721 chr2R 8569173 8569192 chr2R 8569504 8569525 4 332 9.5 3.0 6.2 0.6 352 chr2R 8569173 intergenic not near genes chr2R 8569349 intergenic not near genes chr2R 8569525 intergenic not near genes chr2R_4_8565001 chr2R_8565001 RAL-908 722 chr2R 8612568 8612608 chr2R 8612665 8612705 17 97 3.0 8.5 5.8 2.5 137 chr2R 8612568 intron CG8642 - chr2R 8612636 intron CG8642 - chr2R 8612705 intron CG8642 - chr2R_17_8610001 chr2R_8610001 RAL-908 723 chr2R 8615766 8615804 chr2R 8615895 8615937 9 130 6.0 7.0 6.5 1.2 171 chr2R 8615766 intron Cirl + chr2R 8615852 intron Cirl + chr2R 8615937 5` UTR Cirl + chr2R_9_8615001 chr2R_8615001 RAL-908 724 chr2R 8722742 8722792 chr2R 8723003 8723046 pogo 12 254 2.5 1.0 1.8 4.3 304 chr2R 8722742 intron CG14767 - chr2R 8722894 intron CG14767 - chr2R 8723046 intron CG14767 - chr2R_12_8720001 chr2R_8720001 RAL-908 725 chr2R 8777930 8777946 chr2R 8784154 8784170 diver 7 6224 0.5 11.0 5.8 1.0 6240 chr2R 8777930 intergenic not near genes chr2R 8781050 intergenic not near genes chr2R 8784170 intergenic not near genes chr2R_7_8780001 chr2R_8780001 RAL-908 726 chr2R 8833411 8833439 chr2R 8833512 8833539 8 100 5.5 3.5 4.5 1.5 128 chr2R 8833411 intron sns + chr2R 8833475 intron sns + chr2R 8833539 intron sns + chr2R_8_8830001 chr2R_8830001 RAL-908 727 chr2R 8964548 8964585 chr2R 8964940 8964977 6 392 3.0 5.5 4.2 1.2 429 chr2R 8964548 intron CG8216 - chr2R 8964762 intron CG8216 - chr2R 8964977 intron CG8216 - chr2R_6_8960001 chr2R_8960001 RAL-908 728 chr2R 8967408 8967706 chr2R 8967575 8967839 18 161 4.5 4.5 4.5 3.3 431 chr2R 8967408 intron CG8216 - chr2R 8967624 intron CG8216 - chr2R 8967839 intron CG8216 - chr2R_18_8965001 chr2R_8965001 RAL-908 729 chr2R 8976608 8976637 chr2R 8976690 8976736 6 85 3.5 2.5 3.0 1.5 128 chr2R 8976608 intron CG8213 - chr2R 8976672 intron CG8213 - chr2R 8976736 intron CG8213 - chr2R_6_8975001 chr2R_8975001 RAL-908 730 chr2R 9151282 9151333 chr2R 9157772 9157823 Burdock 18 6490 2.5 7.0 4.8 3.1 6541 chr2R 9151282 exon CG30345 + chr2R 9154552 intergenic not near genes chr2R 9157823 intergenic CG8008 - chr2R_18_9150001 chr2R_9150001 RAL-908 731 chr2R 9212677 9212712 chr2R 9213183 9213218 roo 9 501 0.5 2.5 1.5 3.6 541 chr2R 9212677 intergenic CR45309 + chr2R 9212948 intergenic CR45309 + chr2R 9213218 5` UTR CR45309 + chr2R_9_9210001 chr2R_9210001 RAL-908 732 chr2R 9236584 9236626 chr2R 9236691 9236733 12 106 3.0 5.0 4.0 2.4 149 chr2R 9236584 intron hig - chr2R 9236658 intron hig - chr2R 9236733 intron hig - chr2R_12_9235001 chr2R_9235001 RAL-908 733 chr2R 9389141 9389172 chr2R 9389240 9389274 12 102 1.5 1.0 1.2 5.5 133 chr2R 9389141 5` UTR CG13954 - chr2R 9389208 5` UTR CG13954 - chr2R 9389274 5` UTR CG13954 - chr2R_12_9385001 chr2R_9385001 RAL-908 734 chr2R 9407823 9407855 chr2R 9407936 9407965 10 112 3.5 7.0 5.2 1.6 142 chr2R 9407823 intron wun - chr2R 9407894 intron wun - chr2R 9407965 intron wun - chr2R_10_9405001 chr2R_9405001 RAL-908 735 chr2R 9478469 9478510 chr2R 9478567 9478587 20 94 2.5 4.5 3.5 4.4 118 chr2R 9478469 intergenic Camta + chr2R 9478528 intergenic Camta + chr2R 9478587 intergenic Camta + chr2R_20_9475001 chr2R_9475001 RAL-908 736 chr2R 9480070 9480102 chr2R 9490616 9490653 roo 12 10550 5.5 6.5 6.0 1.7 10583 chr2R 9480070 intergenic not near genes chr2R 9485362 intergenic not near genes chr2R 9490653 intergenic not near genes chr2R_12_9485001 chr2R_9485001 RAL-908 737 chr2R 9561825 9561840 chr2R 9561922 9561948 4 105 0.5 0.5 0.5 2.7 123 chr2R 9561825 3` UTR,intron CR45281 -,CG1809 + chr2R 9561886 3` UTR,intron CR45281 -,CG1809 + chr2R 9561948 3` UTR,intron CR45281 -,CG1809 + chr2R_4_9560001 chr2R_9560001 RAL-908 738 chr2R 9616624 9616638 chr2R 9616749 9616763 5 125 6.5 3.5 5.0 0.8 139 chr2R 9616624 intron Mmp2 - chr2R 9616694 intron Mmp2 - chr2R 9616763 intron Mmp2 - chr2R_5_9615001 chr2R_9615001 RAL-908 739 chr2R 9672035 9672085 chr2R 9672161 9672209 13 125 3.0 3.5 3.2 3.1 174 chr2R 9672035 intron Mmp2 - chr2R 9672122 intron Mmp2 - chr2R 9672209 intron Mmp2 - chr2R_13_9670001 chr2R_9670001 RAL-908 740 chr2R 9724922 9724958 chr2R 9725062 9725098 11 140 2.5 3.5 3.0 2.8 176 chr2R 9724922 intron sqa - chr2R 9725010 intron sqa - chr2R 9725098 intron sqa - chr2R_11_9725001 chr2R_9725001 RAL-908 741 chr2R 9726595 9726640 chr2R 9734167 9734213 17.6 17 7573 4.0 5.5 4.8 2.9 7618 chr2R 9726595 intron sqa - chr2R 9730404 intron sqa - chr2R 9734213 intron sqa - chr2R_17_9730001 chr2R_9730001 RAL-908 742 chr2R 9784121 9784130 chr2R 9784232 9784241 6 111 2.5 7.0 4.8 1.0 120 chr2R 9784121 intron CG1688 - chr2R 9784181 intron CG1688 - chr2R 9784241 intron CG1688 - chr2R_6_9780001 chr2R_9780001 RAL-908 743 chr2R 9805407 9805432 chr2R 9805507 9805533 5 101 2.0 4.0 3.0 1.2 126 chr2R 9805407 intron CG1688 - chr2R 9805470 intron CG1688 - chr2R 9805533 intron CG1688 - chr2R_5_9805001 chr2R_9805001 RAL-908 744 chr2R 9871021 9871071 chr2R 9871527 9871577 roo 11 506 4.5 3.5 4.0 2.2 556 chr2R 9871021 intron cbx - chr2R 9871299 intron cbx - chr2R 9871577 intron,5` UTR cbx -,CG18446 + chr2R_11_9870001 chr2R_9870001 RAL-908 745 chr2R 9945421 9945460 chr2R 9945637 9945675 BS 6 216 5.5 3.0 4.2 1.2 254 chr2R 9945421 intron Mef2 - chr2R 9945548 intron Mef2 - chr2R 9945675 intron Mef2 - chr2R_6_9945001 chr2R_9945001 RAL-908 746 chr2R 9998083 9998090 chr2R 9998197 9998204 4 114 4.5 4.5 4.5 0.7 121 chr2R 9998083 intron Pka-R2 - chr2R 9998144 intron Pka-R2 - chr2R 9998204 intron Pka-R2 - chr2R_4_9995001 chr2R_9995001 RAL-908 747 chr2R 10005539 10005580 chr2R 10005656 10005697 13 115 3.5 2.0 2.8 3.4 158 chr2R 10005539 intron Pka-R2 - chr2R 10005618 intron Pka-R2 - chr2R 10005697 intron Pka-R2 - chr2R_13_10005001 chr2R_10005001 RAL-908 748 chr2R 10005855 10005879 chr2R 10007022 10007046 1360 6 1173 6.5 2.5 4.5 1.1 1191 chr2R 10005855 intron Pka-R2 - chr2R 10006450 intron Pka-R2 - chr2R 10007046 intron Pka-R2 - chr2R_6_10005001 chr2R_10005001 RAL-908 749 chr2R 10008551 10008592 chr2R 10008649 10008700 4 102 0.5 0.0 0.2 3.3 149 chr2R 10008551 intron Pka-R2 - chr2R 10008626 intron Pka-R2 - chr2R 10008700 intron Pka-R2 - chr2R_4_10005001 chr2R_10005001 RAL-908 750 chr2R 10047800 10047846 chr2R 10047903 10047947 8 103 2.0 6.5 4.2 1.5 147 chr2R 10047800 intron oys - chr2R 10047874 intron oys - chr2R 10047947 intron oys - chr2R_8_10045001 chr2R_10045001 RAL-908 751 chr2R 10053503 10053549 chr2R 10053626 10053672 18 122 2.5 5.5 4.0 3.6 169 chr2R 10053503 intron magu + chr2R 10053588 intron magu + chr2R 10053672 intron magu + chr2R_18_10050001 chr2R_10050001 RAL-908 752 chr2R 10086905 10086931 chr2R 10087022 10087048 5 117 6.0 5.0 5.5 0.8 143 chr2R 10086905 intron,exon CG2269 +,sut4 - chr2R 10086976 intron,5` UTR CG2269 +,sut4 - chr2R 10087048 intron,5` UTR CG2269 +,sut4 - chr2R_5_10085001 chr2R_10085001 RAL-908 753 chr2R 10107160 10107201 chr2R 10107267 10107308 8 105 4.5 3.5 4.0 1.6 148 chr2R 10107160 intron 14-3-3zeta + chr2R 10107234 intron 14-3-3zeta + chr2R 10107308 intron 14-3-3zeta + chr2R_8_10105001 chr2R_10105001 RAL-908 754 chr2R 10122721 10122744 chr2R 10122951 10122974 6 230 8.5 2.0 5.2 1.0 253 chr2R 10122721 intergenic Ccs - chr2R 10122848 intergenic Ccs - chr2R 10122974 intergenic Ccs - chr2R_6_10120001 chr2R_10120001 RAL-908 755 chr2R 10131306 10131345 chr2R 10131575 10131614 14 269 4.0 1.0 2.5 4.0 308 chr2R 10131306 intron gem + chr2R 10131460 intron gem + chr2R 10131614 intron gem + chr2R_14_10130001 chr2R_10130001 RAL-908 756 chr2R 10132169 10132221 chr2R 10132269 10132320 10 98 1.0 5.0 3.0 2.5 151 chr2R 10132169 intron gem + chr2R 10132244 intron gem + chr2R 10132320 exon gem + chr2R_10_10130001 chr2R_10130001 RAL-908 757 chr2R 10171094 10171141 chr2R 10171198 10171245 12 104 1.5 4.0 2.8 3.2 151 chr2R 10171094 intron KCNQ - chr2R 10171170 intron KCNQ - chr2R 10171245 intron KCNQ - chr2R_12_10170001 chr2R_10170001 RAL-908 758 chr2R 10172616 10172663 chr2R 10172748 10172769 9 129 6.5 0.5 3.5 2.0 153 chr2R 10172616 intron KCNQ - chr2R 10172692 intron KCNQ - chr2R 10172769 intron KCNQ - chr2R_9_10170001 chr2R_10170001 RAL-908 759 chr2R 10176862 10176913 chr2R 10186049 10186100 roo 24 9185 3.0 3.5 3.2 5.7 9238 chr2R 10176862 intron KCNQ - chr2R 10181481 intron KCNQ - chr2R 10186100 intron KCNQ - chr2R_24_10180001 chr2R_10180001 RAL-908 760 chr2R 10189187 10189201 chr2R 10189284 10189299 13 98 12.5 3.0 7.8 1.5 112 chr2R 10189187 intron KCNQ - chr2R 10189243 intron KCNQ - chr2R 10189299 intron KCNQ - chr2R_13_10185001 chr2R_10185001 RAL-908 761 chr2R 10189203 10189235 chr2R 10189282 10189333 7 95 5.0 3.0 4.0 1.4 130 chr2R 10189203 intron KCNQ - chr2R 10189268 intron KCNQ - chr2R 10189333 intron KCNQ - chr2R_7_10185001 chr2R_10185001 RAL-908 762 chr2R 10216195 10216215 chr2R 10216293 10216313 8 98 1.5 3.0 2.2 2.5 118 chr2R 10216195 intron,intron CG12912 -,Hr46 - chr2R 10216254 intron,intron CG12912 -,Hr46 - chr2R 10216313 intron,intron CG12912 -,Hr46 - chr2R_8_10215001 chr2R_10215001 RAL-908 763 chr2R 10225711 10225749 chr2R 10225813 10225851 15 102 3.5 2.0 2.8 3.9 140 chr2R 10225711 intron,intron CG12912 -,Hr46 - chr2R 10225781 intron,intron CG12912 -,Hr46 - chr2R 10225851 intron,intron CG12912 -,Hr46 - chr2R_15_10225001 chr2R_10225001 RAL-908 764 chr2R 10257143 10257186 chr2R 10257254 10257297 14 111 6.0 3.0 4.5 2.5 154 chr2R 10257143 intron CG12911 + chr2R 10257220 intron CG12911 + chr2R 10257297 intron CG12911 + chr2R_14_10255001 chr2R_10255001 RAL-908 765 chr2R 10274808 10274825 chr2R 10274904 10274921 8 96 5.0 0.0 2.5 2.3 113 chr2R 10274808 intron CAP + chr2R 10274864 intron CAP + chr2R 10274921 intron CAP + chr2R_8_10270001 chr2R_10270001 RAL-908 766 chr2R 10313306 10313345 chr2R 10313402 10313453 8 106 1.5 2.5 2.0 2.7 147 chr2R 10313306 intergenic not near genes chr2R 10313380 intergenic not near genes chr2R 10313453 intergenic Ndg + chr2R_8_10310001 chr2R_10310001 RAL-908 767 chr2R 10352656 10352699 chr2R 10352753 10352796 10 97 4.5 5.5 5.0 1.7 140 chr2R 10352656 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352726 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352796 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_10_10350001 chr2R_10350001 RAL-908 768 chr2R 10376221 10376269 chr2R 10376327 10376378 19 106 4.5 8.0 6.2 2.6 157 chr2R 10376221 intron CG42732 - chr2R 10376300 intron CG42732 - chr2R 10376378 intron CG42732 - chr2R_19_10375001 chr2R_10375001 RAL-908 769 chr2R 10409044 10409085 chr2R 10409141 10409176 8 96 0.5 3.5 2.0 2.7 132 chr2R 10409044 intron CG42732 - chr2R 10409110 intron CG42732 - chr2R 10409176 intron,exon CG42732 -,CG33477 - chr2R_8_10405001 chr2R_10405001 RAL-908 770 chr2R 10429002 10429051 chr2R 10429099 10429148 16 96 2.5 2.5 2.5 4.6 146 chr2R 10429002 intergenic not near genes chr2R 10429075 intergenic not near genes chr2R 10429148 intergenic not near genes chr2R_16_10425001 chr2R_10425001 RAL-908 771 chr2R 10454081 10454123 chr2R 10454178 10454220 12 96 3.0 6.0 4.5 2.2 139 chr2R 10454081 intron,intron Galphao +,Cyp49a1 - chr2R 10454150 intron,intron Galphao +,Cyp49a1 - chr2R 10454220 intron,intron Galphao +,Cyp49a1 - chr2R_12_10450001 chr2R_10450001 RAL-908 772 chr2R 10485883 10485921 chr2R 10485982 10486020 7 98 4.5 0.0 2.2 2.2 137 chr2R 10485883 intron lola - chr2R 10485952 intron lola - chr2R 10486020 intron lola - chr2R_7_10485001 chr2R_10485001 RAL-908 773 chr2R 10551044 10551173 chr2R 10551155 10551312 8 128 1.5 1.5 1.5 3.2 268 chr2R 10551044 intergenic not near genes chr2R 10551178 intergenic not near genes chr2R 10551312 intergenic not near genes chr2R_8_10550001 chr2R_10550001 RAL-908 774 chr2R 10563237 10563278 chr2R 10563355 10563361 4 109 0.0 7.0 3.5 0.9 124 chr2R 10563237 intron psq + chr2R 10563299 intron psq + chr2R 10563361 intron psq + chr2R_4_10560001 chr2R_10560001 RAL-908 775 chr2R 10603988 10604019 chr2R 10604099 10604130 14 111 6.0 8.0 7.0 1.8 142 chr2R 10603988 intron psq + chr2R 10604059 intron psq + chr2R 10604130 intron psq + chr2R_14_10600001 chr2R_10600001 RAL-908 776 chr2R 10622332 10622359 chr2R 10637117 10637144 mdg1 11 14784 7.0 5.0 6.0 1.6 14812 chr2R 10622332 intron CG11883 + chr2R 10629738 intron CG11883 + chr2R 10637144 intron CG11883 + chr2R_11_10625001 chr2R_10625001 RAL-908 777 chr2R 10827321 10827344 chr2R 10827429 10827452 11 106 6.0 4.5 5.2 1.8 131 chr2R 10827321 exon CG12325 + chr2R 10827386 3` UTR CG12325 + chr2R 10827452 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_11_10825001 chr2R_10825001 RAL-908 778 chr2R 10827349 10827361 chr2R 10827424 10827454 5 98 3.5 4.0 3.8 1.0 105 chr2R 10827349 exon CG12325 + chr2R 10827402 3` UTR CG12325 + chr2R 10827454 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_5_10825001 chr2R_10825001 RAL-908 779 chr2R 10848306 10848319 chr2R 10848427 10848438 6 120 0.0 2.5 1.2 2.7 132 chr2R 10848306 intron CG30015 - chr2R 10848372 intron CG30015 - chr2R 10848438 intron CG30015 - chr2R_6_10845001 chr2R_10845001 RAL-908 780 chr2R 10891233 10891271 chr2R 10891347 10891388 9 116 2.5 3.0 2.8 2.4 155 chr2R 10891233 exon CG30020 + chr2R 10891310 intron CG30020 + chr2R 10891388 intron CG30020 + chr2R_9_10890001 chr2R_10890001 RAL-908 781 chr2R 10948023 10948060 chr2R 10955576 10955631 17.6 6 7562 0.5 0.5 0.5 4.0 7608 chr2R 10948023 intergenic not near genes chr2R 10951827 intergenic not near genes chr2R 10955631 intergenic not near genes chr2R_6_10950001 chr2R_10950001 RAL-908 782 chr2R 10979657 10979684 chr2R 10980137 10980169 297 4 486 1.5 3.0 2.2 1.2 512 chr2R 10979657 intergenic not near genes chr2R 10979913 intergenic not near genes chr2R 10980169 intergenic not near genes chr2R_4_10975001 chr2R_10975001 RAL-908 783 chr2R 11009803 11009809 chr2R 11018997 11019003 roo 4 9194 9.0 2.5 5.8 0.6 9200 chr2R 11009803 intron luna - chr2R 11014403 intron luna - chr2R 11019003 intron luna - chr2R_4_11010001 chr2R_11010001 RAL-908 784 chr2R 11009810 11009845 chr2R 11018991 11019039 roo 8 9187 4.0 2.0 3.0 2.0 9229 chr2R 11009810 intron luna - chr2R 11014424 intron luna - chr2R 11019039 intron luna - chr2R_8_11010001 chr2R_11010001 RAL-908 785 chr2R 11019861 11019907 chr2R 11024947 11024989 jockey 9 5077 1.0 2.0 1.5 3.6 5128 chr2R 11019861 intron luna - chr2R 11022425 intron luna - chr2R 11024989 intron luna - chr2R_9_11020001 chr2R_11020001 RAL-908 786 chr2R 11032626 11032666 chr2R 11032740 11032776 4 113 6.0 3.5 4.8 0.7 150 chr2R 11032626 intron luna - chr2R 11032701 intron luna - chr2R 11032776 intron luna - chr2R_4_11030001 chr2R_11030001 RAL-908 787 chr2R 11118146 11118183 chr2R 11118243 11118280 7 97 0.0 4.0 2.0 2.3 134 chr2R 11118146 3` UTR Cyp12d1-p - chr2R 11118213 3` UTR Cyp12d1-p - chr2R 11118280 3` UTR Cyp12d1-p - chr2R_7_11115001 chr2R_11115001 RAL-908 788 chr2R 11154194 11154211 chr2R 11154328 11154345 6 134 4.5 6.5 5.5 0.9 151 chr2R 11154194 intron CG13229 - chr2R 11154270 intron CG13229 - chr2R 11154345 intron CG13229 - chr2R_6_11150001 chr2R_11150001 RAL-908 789 chr2R 11158850 11158890 chr2R 11159039 11159079 10 189 5.0 5.5 5.2 1.6 229 chr2R 11158850 intron CG13229 - chr2R 11158964 intron CG13229 - chr2R 11159079 intron CG13229 - chr2R_10_11155001 chr2R_11155001 RAL-908 790 chr2R 11161084 11161123 chr2R 11161360 11161399 7 273 2.5 5.0 3.8 1.5 315 chr2R 11161084 intron,intron CG13229 -,shn + chr2R 11161242 intron,intron CG13229 -,shn + chr2R 11161399 intron,intron CG13229 -,shn + chr2R_7_11160001 chr2R_11160001 RAL-908 791 chr2R 11179251 11179275 chr2R 11179357 11179381 7 106 8.0 8.0 8.0 0.8 130 chr2R 11179251 intron shn + chr2R 11179316 intron shn + chr2R 11179381 intron shn + chr2R_7_11175001 chr2R_11175001 RAL-908 792 chr2R 11188032 11188082 chr2R 11188176 11188225 7 144 3.5 0.0 1.8 2.5 193 chr2R 11188032 intron shn + chr2R 11188128 intron shn + chr2R 11188225 intron shn + chr2R_7_11185001 chr2R_11185001 RAL-908 793 chr2R 11207805 11207841 chr2R 11208007 11208053 BS 8 208 6.0 5.5 5.8 1.2 248 chr2R 11207805 intron shn + chr2R 11207929 intron shn + chr2R 11208053 intron shn + chr2R_8_11205001 chr2R_11205001 RAL-908 794 chr2R 11256259 11256297 chr2R 11256469 11256507 12 210 6.5 4.0 5.2 1.9 248 chr2R 11256259 intergenic CG13223 +,Cpr47Eb + chr2R 11256383 intergenic CG13223 +,Cpr47Eb + chr2R 11256507 5` UTR CG13223 + chr2R_12_11255001 chr2R_11255001 RAL-908 795 chr2R 11297607 11297646 chr2R 11301943 11301987 flea 13 4340 6.5 6.0 6.2 1.8 4380 chr2R 11297607 intergenic CG42336 - chr2R 11299797 intergenic not near genes chr2R 11301987 5` UTR CG7741 + chr2R_13_11295001 chr2R_11295001 RAL-908 796 chr2R 11415514 11415551 chr2R 11418683 11418720 opus 13 3166 2.5 4.0 3.2 3.1 3206 chr2R 11415514 intron Drip - chr2R 11417117 intron Drip - chr2R 11418720 intron Drip - chr2R_13_11415001 chr2R_11415001 RAL-908 797 chr2R 11419847 11419882 chr2R 11419997 11420017 6 147 3.0 2.5 2.8 1.6 170 chr2R 11419847 intron Drip - chr2R 11419932 intron Drip - chr2R 11420017 intron Drip - chr2R_6_11415001 chr2R_11415001 RAL-908 798 chr2R 11434814 11434858 chr2R 11434975 11435019 15 161 3.0 6.5 4.8 2.6 205 chr2R 11434814 intergenic not near genes chr2R 11434916 intergenic not near genes chr2R 11435019 intergenic not near genes chr2R_15_11430001 chr2R_11430001 RAL-908 799 chr2R 11472636 11472672 chr2R 11473853 11473889 pogo 7 1217 3.0 4.5 3.8 1.5 1253 chr2R 11472636 intergenic not near genes chr2R 11473262 intergenic not near genes chr2R 11473889 intergenic not near genes chr2R_7_11470001 chr2R_11470001 RAL-908 800 chr2R 11494580 11494626 chr2R 11494689 11494735 15 103 1.5 4.5 3.0 3.8 155 chr2R 11494580 intron inv + chr2R 11494658 intron inv + chr2R 11494735 intron inv + chr2R_15_11490001 chr2R_11490001 RAL-908 801 chr2R 11495172 11495193 chr2R 11495481 11495502 10 308 1.5 3.5 2.5 2.9 330 chr2R 11495172 intron inv + chr2R 11495337 intron inv + chr2R 11495502 intron inv + chr2R_10_11495001 chr2R_11495001 RAL-908 802 chr2R 11516560 11516594 chr2R 11516716 11516750 7 156 1.5 2.0 1.8 2.5 190 chr2R 11516560 intergenic not near genes chr2R 11516655 intergenic not near genes chr2R 11516750 intergenic not near genes chr2R_7_11515001 chr2R_11515001 RAL-908 803 chr2R 11555381 11555416 chr2R 11555735 11555771 7 355 3.0 1.5 2.2 2.2 390 chr2R 11555381 intergenic not near genes chr2R 11555576 intergenic not near genes chr2R 11555771 intergenic not near genes chr2R_7_11555001 chr2R_11555001 RAL-908 804 chr2R 11636399 11636439 chr2R 11636486 11636536 7 86 2.5 2.0 2.2 2.2 137 chr2R 11636399 intron CG9005 - chr2R 11636468 intron CG9005 - chr2R 11636536 intron CG9005 - chr2R_7_11635001 chr2R_11635001 RAL-908 805 chr2R 11645301 11645359 chr2R 11645397 11645445 6 95 0.0 0.0 0.0 6.0 144 chr2R 11645301 intron CG9003 - chr2R 11645373 intron CG9003 - chr2R 11645445 intron CG9003 - chr2R_6_11645001 chr2R_11645001 RAL-908 806 chr2R 11665790 11665837 chr2R 11665898 11665945 9 107 4.0 3.5 3.8 1.9 155 chr2R 11665790 intron,5` UTR Roc2 -,Tret1-1 + chr2R 11665868 intron,intron Roc2 -,Tret1-1 + chr2R 11665945 intron,intron Roc2 -,Tret1-1 + chr2R_9_11665001 chr2R_11665001 RAL-908 807 chr2R 11675588 11675618 chr2R 11675691 11675721 14 102 2.0 3.0 2.5 4.0 133 chr2R 11675588 intron Roc2 - chr2R 11675654 intron Roc2 - chr2R 11675721 intron Roc2 - chr2R_14_11675001 chr2R_11675001 RAL-908 808 chr2R 11724144 11724188 chr2R 11724239 11724291 6 102 3.0 5.5 4.2 1.2 147 chr2R 11724144 intron pyr + chr2R 11724218 intron pyr + chr2R 11724291 intron pyr + chr2R_6_11720001 chr2R_11720001 RAL-908 809 chr2R 11803146 11803162 chr2R 11803251 11803267 4 105 3.0 6.0 4.5 0.7 121 chr2R 11803146 intron ths + chr2R 11803206 intron ths + chr2R 11803267 intron ths + chr2R_4_11800001 chr2R_11800001 RAL-908 810 chr2R 11804893 11804914 chr2R 11805010 11805031 6 117 4.5 3.5 4.0 1.2 138 chr2R 11804893 intron ths + chr2R 11804962 intron ths + chr2R 11805031 intron ths + chr2R_6_11800001 chr2R_11800001 RAL-908 811 chr2R 11922734 11922771 chr2R 11922821 11922870 12 98 4.5 5.5 5.0 2.0 136 chr2R 11922734 intergenic not near genes chr2R 11922802 intergenic not near genes chr2R 11922870 intergenic not near genes chr2R_12_11920001 chr2R_11920001 RAL-908 812 chr2R 11928672 11928698 chr2R 11928770 11928796 4 98 0.0 5.5 2.8 1.1 124 chr2R 11928672 intergenic not near genes chr2R 11928734 intergenic not near genes chr2R 11928796 intergenic CR44312 - chr2R_4_11925001 chr2R_11925001 RAL-908 813 chr2R 12004188 12004215 chr2R 12004288 12004315 13 98 2.5 2.0 2.2 4.1 127 chr2R 12004188 exon otk - chr2R 12004252 intron otk - chr2R 12004315 intron otk - chr2R_13_12000001 chr2R_12000001 RAL-908 814 chr2R 12124811 12124862 chr2R 12124914 12124965 20 101 2.5 4.0 3.2 4.8 154 chr2R 12124811 intergenic not near genes chr2R 12124888 intergenic not near genes chr2R 12124965 intergenic not near genes chr2R_20_12120001 chr2R_12120001 RAL-908 815 chr2R 12185981 12186035 chr2R 12186096 12186150 37 112 7.5 5.0 6.2 5.1 169 chr2R 12185981 intron Cyp6g1 + chr2R 12186066 intron Cyp6g1 + chr2R 12186150 intron Cyp6g1 + chr2R_37_12185001 chr2R_12185001 RAL-908 816 chr2R 12185223 12185236 chr2R 12188129 12188141 5 2906 20.5 69.0 44.8 0.1 2918 chr2R 12185223 3` UTR,exon CG13175 +,CG33964 + chr2R 12186682 exon Cyp6g1 + chr2R 12188141 3` UTR Cyp6g1 + chr2R_5_12185001 chr2R_12185001 RAL-908 817 chr2R 12187475 12187511 chr2R 12190098 12190124 22 2607 33.0 28.5 30.8 0.7 2649 chr2R 12187475 exon Cyp6g1 + chr2R 12188800 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_22_12185001 chr2R_12185001 RAL-908 818 chr2R 12210111 12210164 chr2R 12210212 12210265 10 100 2.0 2.5 2.2 3.1 154 chr2R 12210111 exon Sr-CII - chr2R 12210188 intron Sr-CII - chr2R 12210265 exon Sr-CII - chr2R_10_12210001 chr2R_12210001 RAL-908 819 chr2R 12236215 12236240 chr2R 12236326 12236335 7 107 3.0 7.0 5.0 1.2 120 chr2R 12236215 intergenic not near genes chr2R 12236275 intergenic not near genes chr2R 12236335 intergenic not near genes chr2R_7_12235001 chr2R_12235001 RAL-908 820 chr2R 12255708 12255746 chr2R 12255847 12255885 16 139 3.5 4.5 4.0 3.2 177 chr2R 12255708 intergenic CG13168 + chr2R 12255796 intergenic CG13168 + chr2R 12255885 intergenic CG13168 + chr2R_16_12255001 chr2R_12255001 RAL-908 821 chr2R 12294753 12294789 chr2R 12294860 12294896 8 104 2.5 1.0 1.8 2.9 143 chr2R 12294753 intron CG42700 + chr2R 12294824 intron CG42700 + chr2R 12294896 intron CG42700 + chr2R_8_12290001 chr2R_12290001 RAL-908 822 chr2R 12334867 12334872 chr2R 12334965 12334970 6 98 8.5 4.5 6.5 0.8 103 chr2R 12334867 intergenic CG8490 + chr2R 12334918 intergenic CG8490 + chr2R 12334970 intergenic CG8490 + chr2R_6_12330001 chr2R_12330001 RAL-908 823 chr2R 12481143 12481162 chr2R 12482957 12482980 roo 7 1817 1.0 4.0 2.5 2.0 1837 chr2R 12481143 exon Dh44-R2 + chr2R 12482062 intron Dh44-R2 + chr2R 12482980 intron Dh44-R2 + chr2R_7_12480001 chr2R_12480001 RAL-908 824 chr2R 12527276 12527283 chr2R 12527505 12527512 4 229 2.5 7.0 4.8 0.7 236 chr2R 12527276 intergenic not near genes chr2R 12527394 intergenic not near genes chr2R 12527512 intergenic not near genes chr2R_4_12525001 chr2R_12525001 RAL-908 825 chr2R 12527284 12527303 chr2R 12527502 12527532 6 227 1.0 6.0 3.5 1.3 248 chr2R 12527284 intergenic not near genes chr2R 12527408 intergenic not near genes chr2R 12527532 intergenic not near genes chr2R_6_12525001 chr2R_12525001 RAL-908 826 chr2R 12548499 12548551 chr2R 12548596 12548648 6 97 0.0 2.5 1.2 2.7 149 chr2R 12548499 intron fra + chr2R 12548574 intron fra + chr2R 12548648 intron fra + chr2R_6_12545001 chr2R_12545001 RAL-908 827 chr2R 12565564 12565592 chr2R 12565967 12565995 9 402 0.0 7.5 3.8 1.9 431 chr2R 12565564 intergenic not near genes chr2R 12565780 intergenic Cyp301a1 + chr2R 12565995 intergenic Cyp301a1 + chr2R_9_12565001 chr2R_12565001 RAL-908 828 chr2R 12677377 12677409 chr2R 12677481 12677513 10 104 0.0 3.5 1.8 3.6 136 chr2R 12677377 intron CG42708 - chr2R 12677445 intron CG42708 - chr2R 12677513 intron CG42708 - chr2R_10_12675001 chr2R_12675001 RAL-908 829 chr2R 12707509 12707549 chr2R 12715895 12715935 roo 12 8385 0.5 3.5 2.0 4.0 8426 chr2R 12707509 intron CG42663 + chr2R 12711722 intron CG42663 + chr2R 12715935 intron CG42663 + chr2R_12_12710001 chr2R_12710001 RAL-908 830 chr2R 12728852 12728905 chr2R 12728975 12729023 9 120 0.0 2.0 1.0 4.5 171 chr2R 12728852 intron CG42663 + chr2R 12728938 intron CG42663 + chr2R 12729023 intron CG42663 + chr2R_9_12725001 chr2R_12725001 RAL-908 831 chr2R 12736080 12736091 chr2R 12736147 12736172 5 81 3.5 3.0 3.2 1.2 92 chr2R 12736080 intron CG42663 + chr2R 12736126 intron CG42663 + chr2R 12736172 intron CG42663 + chr2R_5_12735001 chr2R_12735001 RAL-908 832 chr2R 12789273 12789324 chr2R 12797656 12797697 roo 10 8377 2.5 2.5 2.5 2.9 8424 chr2R 12789273 intron,3` UTR sca +,CR45137 - chr2R 12793485 intron,intron sca +,CR45137 - chr2R 12797697 intron,3` UTR sca +,CR45137 - chr2R_10_12790001 chr2R_12790001 RAL-908 833 chr2R 12819457 12819477 chr2R 12824542 12824561 jockey 4 5085 1.5 5.0 3.2 1.0 5104 chr2R 12819457 intergenic not near genes chr2R 12822009 intergenic not near genes chr2R 12824561 intergenic not near genes chr2R_4_12820001 chr2R_12820001 RAL-908 834 chr2R 12897462 12897485 chr2R 12897573 12897596 8 111 5.0 4.0 4.5 1.5 134 chr2R 12897462 intron vg + chr2R 12897529 intron vg + chr2R 12897596 intron vg + chr2R_8_12895001 chr2R_12895001 RAL-908 835 chr2R 12962863 12962894 chr2R 12962981 12963035 10 137 4.5 2.5 3.5 2.2 172 chr2R 12962863 intergenic not near genes chr2R 12962949 intergenic not near genes chr2R 12963035 intergenic not near genes chr2R_10_12960001 chr2R_12960001 RAL-908 836 chr2R 13012115 13012161 chr2R 13012231 13012278 7 117 2.0 6.5 4.2 1.3 163 chr2R 13012115 intergenic not near genes chr2R 13012196 intergenic not near genes chr2R 13012278 intergenic not near genes chr2R_7_13010001 chr2R_13010001 RAL-908 837 chr2R 13027724 13027734 chr2R 13027823 13027828 6 98 7.5 3.0 5.2 1.0 104 chr2R 13027724 intergenic not near genes chr2R 13027776 intergenic not near genes chr2R 13027828 intergenic not near genes chr2R_6_13025001 chr2R_13025001 RAL-908 838 chr2R 13136822 13136861 chr2R 13141640 13141679 Doc 10 4818 3.0 2.0 2.5 2.9 4857 chr2R 13136822 exon Cap-G + chr2R 13139250 intron Cap-G + chr2R 13141679 intron Cap-G + chr2R_10_13135001 chr2R_13135001 RAL-908 839 chr2R 13167390 13167430 chr2R 13167492 13167532 11 102 3.5 3.5 3.5 2.4 142 chr2R 13167390 intron GLaz - chr2R 13167461 intron GLaz - chr2R 13167532 intron GLaz - chr2R_11_13165001 chr2R_13165001 RAL-908 840 chr2R 13172107 13172122 chr2R 13172181 13172220 4 92 4.5 5.5 5.0 0.7 113 chr2R 13172107 intron AGBE + chr2R 13172164 intron AGBE + chr2R 13172220 intron AGBE + chr2R_4_13170001 chr2R_13170001 RAL-908 841 chr2R 13300086 13300102 chr2R 13300189 13300205 10 102 1.5 1.0 1.2 4.5 119 chr2R 13300086 intron CG17047 + chr2R 13300146 intron CG17047 + chr2R 13300205 exon CG17047 + chr2R_10_13300001 chr2R_13300001 RAL-908 842 chr2R 13305481 13305510 chr2R 13305581 13305611 6 102 6.0 6.0 6.0 0.9 130 chr2R 13305481 intergenic not near genes chr2R 13305546 intergenic not near genes chr2R 13305611 intergenic not near genes chr2R_6_13305001 chr2R_13305001 RAL-908 843 chr2R 13309647 13309681 chr2R 13309785 13309819 11 138 3.0 3.5 3.2 2.6 172 chr2R 13309647 intergenic not near genes chr2R 13309733 intergenic not near genes chr2R 13309819 intergenic not near genes chr2R_11_13305001 chr2R_13305001 RAL-908 844 chr2R 13403905 13403937 chr2R 13404010 13404042 17 104 3.5 1.5 2.5 4.9 137 chr2R 13403905 intergenic not near genes chr2R 13403974 intergenic not near genes chr2R 13404042 intergenic not near genes chr2R_17_13400001 chr2R_13400001 RAL-908 845 chr2R 13431471 13431517 chr2R 13431570 13431616 12 99 5.0 2.5 3.8 2.5 145 chr2R 13431471 intron CG42321 - chr2R 13431544 intron CG42321 - chr2R 13431616 intron CG42321 - chr2R_12_13430001 chr2R_13430001 RAL-908 846 chr2R 13439090 13439228 chr2R 13439225 13439324 13 133 0.5 0.0 0.2 10.8 234 chr2R 13439090 intergenic CG42321 -,cnn - chr2R 13439207 intergenic cnn -,CG42321 - chr2R 13439324 3` UTR cnn - chr2R_13_13435001 chr2R_13435001 RAL-908 847 chr2R 13540380 13540421 chr2R 13540650 13540691 8 270 0.5 9.0 4.8 1.4 311 chr2R 13540380 intron CG6145 - chr2R 13540536 intron CG6145 - chr2R 13540691 intron CG6145 - chr2R_8_13540001 chr2R_13540001 RAL-908 848 chr2R 13544544 13544587 chr2R 13544638 13544678 9 95 0.5 6.5 3.5 2.0 134 chr2R 13544544 intron CG6145 - chr2R 13544611 intron CG6145 - chr2R 13544678 intron CG6145 - chr2R_9_13540001 chr2R_13540001 RAL-908 849 chr2R 13547067 13547109 chr2R 13547282 13547324 16 215 2.5 2.5 2.5 4.6 257 chr2R 13547067 intron CG6145 - chr2R 13547196 intron CG6145 - chr2R 13547324 intron CG6145 - chr2R_16_13545001 chr2R_13545001 RAL-908 850 chr2R 13580487 13580531 chr2R 13580847 13580877 jockey 14 366 1.5 3.5 2.5 4.0 390 chr2R 13580487 3` UTR CG6191 - chr2R 13580682 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580877 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_14_13580001 chr2R_13580001 RAL-908 851 chr2R 13648472 13648519 chr2R 13648678 13648725 5 206 1.0 1.5 1.2 2.3 253 chr2R 13648472 intron fas + chr2R 13648598 intron fas + chr2R 13648725 intron fas + chr2R_5_13645001 chr2R_13645001 RAL-908 852 chr2R 13709840 13709847 chr2R 13709953 13709960 4 113 2.0 12.0 7.0 0.5 120 chr2R 13709840 intron fas + chr2R 13709900 intron fas + chr2R 13709960 intron fas + chr2R_4_13705001 chr2R_13705001 RAL-908 853 chr2R 13727834 13727851 chr2R 13727940 13727940 6 100 2.5 8.0 5.2 1.0 106 chr2R 13727834 intron fas + chr2R 13727887 intron fas + chr2R 13727940 intron fas + chr2R_6_13725001 chr2R_13725001 RAL-908 854 chr2R 13728115 13728162 chr2R 13735792 13735839 opus 17 7677 7.0 3.5 5.2 2.7 7724 chr2R 13728115 intron fas + chr2R 13731977 intron fas + chr2R 13735839 intron fas + chr2R_17_13730001 chr2R_13730001 RAL-908 855 chr2R 13768971 13769008 chr2R 13769090 13769127 11 118 2.5 5.5 4.0 2.2 156 chr2R 13768971 intergenic not near genes chr2R 13769049 intergenic not near genes chr2R 13769127 intergenic not near genes chr2R_11_13765001 chr2R_13765001 RAL-908 856 chr2R 13851878 13851914 chr2R 13851960 13852011 10 91 2.5 2.5 2.5 2.9 133 chr2R 13851878 exon CG30485 + chr2R 13851944 exon CG30485 + chr2R 13852011 exon CG30485 + chr2R_10_13850001 chr2R_13850001 RAL-908 857 chr2R 13905581 13905629 chr2R 13907583 13907615 Rt1a 6 1996 0.0 0.5 0.2 5.0 2034 chr2R 13905581 intron shot - chr2R 13906598 intron shot - chr2R 13907615 intron shot - chr2R_6_13905001 chr2R_13905001 RAL-908 858 chr2R 13986872 13986911 chr2R 13986981 13987020 16 108 5.5 6.5 6.0 2.3 148 chr2R 13986872 intron RN-tre - chr2R 13986946 intron RN-tre - chr2R 13987020 intron RN-tre - chr2R_16_13985001 chr2R_13985001 RAL-908 859 chr2R 14000213 14000255 chr2R 14000461 14000503 16 246 5.0 4.0 4.5 2.9 290 chr2R 14000213 intron mam + chr2R 14000358 intron mam + chr2R 14000503 intron mam + chr2R_16_14000001 chr2R_14000001 RAL-908 860 chr2R 14018154 14018188 chr2R 14018258 14018292 9 103 3.5 6.5 5.0 1.5 138 chr2R 14018154 intron mam + chr2R 14018223 intron mam + chr2R 14018292 intron mam + chr2R_9_14015001 chr2R_14015001 RAL-908 861 chr2R 14029590 14029631 chr2R 14029767 14029809 14 177 5.5 5.5 5.5 2.2 219 chr2R 14029590 intron mam + chr2R 14029700 intron mam + chr2R 14029809 intron mam + chr2R_14_14025001 chr2R_14025001 RAL-908 862 chr2R 14037281 14037289 chr2R 14037384 14037391 4 103 0.0 8.5 4.2 0.8 110 chr2R 14037281 intron mam + chr2R 14037336 intron mam + chr2R 14037391 intron mam + chr2R_4_14035001 chr2R_14035001 RAL-908 863 chr2R 14093412 14093436 chr2R 14109583 14109596 4 16168 4.5 1.5 3.0 1.0 16184 chr2R 14093412 intron Prosap - chr2R 14101504 intron Prosap - chr2R 14109596 intron Prosap - chr2R_4_14100001 chr2R_14100001 RAL-908 864 chr2R 14141933 14141952 chr2R 14142058 14142077 8 125 2.5 5.0 3.8 1.7 144 chr2R 14141933 intergenic not near genes chr2R 14142005 intergenic not near genes chr2R 14142077 intergenic not near genes chr2R_8_14140001 chr2R_14140001 RAL-908 865 chr2R 14142428 14142474 chr2R 14142538 14142584 17 110 2.5 3.5 3.0 4.2 156 chr2R 14142428 intergenic not near genes chr2R 14142506 intergenic not near genes chr2R 14142584 intergenic not near genes chr2R_17_14140001 chr2R_14140001 RAL-908 866 chr2R 14168355 14168397 chr2R 14168459 14168506 16 109 1.5 4.0 2.8 4.2 151 chr2R 14168355 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168430 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168506 intergenic CG18327 +,CG18324 +,CR44368 - chr2R_16_14165001 chr2R_14165001 RAL-908 867 chr2R 14285049 14285051 chr2R 14285152 14285154 4 103 2.0 5.0 3.5 0.9 105 chr2R 14285049 intron Ih + chr2R 14285102 intron Ih + chr2R 14285154 intron Ih + chr2R_4_14285001 chr2R_14285001 RAL-908 868 chr2R 14393845 14393898 chr2R 14393950 14393991 13 101 3.5 2.5 3.0 3.2 146 chr2R 14393845 intergenic not near genes chr2R 14393918 intergenic not near genes chr2R 14393991 intergenic not near genes chr2R_13_14390001 chr2R_14390001 RAL-908 869 chr2R 14394211 14394228 chr2R 14399020 14399037 Doc 4 4809 8.0 5.0 6.5 0.5 4826 chr2R 14394211 intergenic not near genes chr2R 14396624 intergenic not near genes chr2R 14399037 intergenic not near genes chr2R_4_14395001 chr2R_14395001 RAL-908 870 chr2R 14467275 14467317 chr2R 14476447 14476489 roo 6 9169 2.5 2.5 2.5 1.7 9214 chr2R 14467275 intergenic not near genes chr2R 14471882 intergenic not near genes chr2R 14476489 5` UTR CR44462 + chr2R_6_14470001 chr2R_14470001 RAL-908 871 chr2R 14497373 14497419 chr2R 14498556 14498604 1360 4 1180 0.5 2.5 1.5 1.6 1231 chr2R 14497373 3` UTR Cpsf160 - chr2R 14497988 intron Cpsf160 - chr2R 14498604 3` UTR Cpsf160 - chr2R_4_14495001 chr2R_14495001 RAL-908 872 chr2R 14514467 14514499 chr2R 14514580 14514612 11 113 5.5 8.5 7.0 1.4 145 chr2R 14514467 intron,intron Cpr51A -,CG30197 + chr2R 14514540 intron,intron Cpr51A -,CG30197 + chr2R 14514612 intron,intron Cpr51A -,CG30197 + chr2R_11_14510001 chr2R_14510001 RAL-908 873 chr2R 14530748 14530781 chr2R 14530847 14530880 5 97 4.0 4.0 4.0 1.0 132 chr2R 14530748 intron ttv + chr2R 14530814 intron ttv + chr2R 14530880 intron ttv + chr2R_5_14530001 chr2R_14530001 RAL-908 874 chr2R 14536223 14536251 chr2R 14536373 14536401 8 150 3.0 5.0 4.0 1.6 178 chr2R 14536223 intron ttv + chr2R 14536312 intron ttv + chr2R 14536401 intron ttv + chr2R_8_14535001 chr2R_14535001 RAL-908 875 chr2R 14565545 14565588 chr2R 14565642 14565674 9 96 3.5 4.0 3.8 1.9 129 chr2R 14565545 intron ttv + chr2R 14565610 intron ttv + chr2R 14565674 intron ttv + chr2R_9_14565001 chr2R_14565001 RAL-908 876 chr2R 14693890 14693906 chr2R 14693994 14694011 5 105 6.5 2.5 4.5 0.9 121 chr2R 14693890 intron mspo - chr2R 14693950 intron mspo - chr2R 14694011 intron mspo - chr2R_5_14690001 chr2R_14690001 RAL-908 877 chr2R 14693909 14693931 chr2R 14693989 14694036 11 101 5.5 2.5 4.0 2.2 127 chr2R 14693909 intron mspo - chr2R 14693972 intron mspo - chr2R 14694036 intron mspo - chr2R_11_14690001 chr2R_14690001 RAL-908 878 chr2R 14729947 14729952 chr2R 14730046 14730053 4 102 7.5 3.5 5.5 0.6 106 chr2R 14729947 intergenic not near genes chr2R 14730000 intergenic not near genes chr2R 14730053 intergenic not near genes chr2R_4_14725001 chr2R_14725001 RAL-908 879 chr2R 14799868 14799888 chr2R 14799964 14799983 7 96 2.5 9.0 5.8 1.0 115 chr2R 14799868 intron kn - chr2R 14799926 intron kn - chr2R 14799983 intron kn - chr2R_7_14795001 chr2R_14795001 RAL-908 880 chr2R 14816090 14816132 chr2R 14816201 14816227 6 110 4.0 4.0 4.0 1.2 137 chr2R 14816090 intergenic not near genes chr2R 14816158 intergenic not near genes chr2R 14816227 intergenic not near genes chr2R_6_14815001 chr2R_14815001 RAL-908 881 chr2R 14826379 14826381 chr2R 14826503 14826505 4 124 5.0 3.0 4.0 0.8 126 chr2R 14826379 intergenic not near genes chr2R 14826442 intergenic not near genes chr2R 14826505 intergenic not near genes chr2R_4_14825001 chr2R_14825001 RAL-908 882 chr2R 14850047 14850086 chr2R 14850172 14850196 12 123 21.0 26.0 23.5 0.5 149 chr2R 14850047 exon SMC2 - chr2R 14850122 intron SMC2 - chr2R 14850196 exon SMC2 - chr2R_12_14850001 chr2R_14850001 RAL-908 883 chr2R 14855012 14855023 chr2R 14855124 14855135 5 112 6.5 0.0 3.2 1.2 123 chr2R 14855012 5` UTR Ciao1 - chr2R 14855074 intergenic Ciao1 -,HPS1 + chr2R 14855135 intergenic Ciao1 -,HPS1 + chr2R_5_14855001 chr2R_14855001 RAL-908 884 chr2R 14855024 14855043 chr2R 14855122 14855155 8 110 4.5 0.0 2.2 2.5 131 chr2R 14855024 5` UTR Ciao1 - chr2R 14855090 intergenic Ciao1 -,HPS1 + chr2R 14855155 intergenic Ciao1 -,HPS1 + chr2R_8_14855001 chr2R_14855001 RAL-908 885 chr2R 14889193 14889224 chr2R 14897820 14897843 Max-element 9 8626 8.5 0.5 4.5 1.6 8650 chr2R 14889193 intergenic Cyp6a8 - chr2R 14893518 intergenic not near genes chr2R 14897843 intergenic not near genes chr2R_9_14890001 chr2R_14890001 RAL-908 886 chr2R 14911689 14911724 chr2R 14911832 14911867 7 143 6.0 6.5 6.2 1.0 178 chr2R 14911689 intron CG10249 - chr2R 14911778 intron CG10249 - chr2R 14911867 intron CG10249 - chr2R_7_14910001 chr2R_14910001 RAL-908 887 chr2R 14916535 14916551 chr2R 14916635 14916651 5 100 4.5 3.5 4.0 1.0 116 chr2R 14916535 intron CG10249 - chr2R 14916593 intron CG10249 - chr2R 14916651 intron CG10249 - chr2R_5_14915001 chr2R_14915001 RAL-908 888 chr2R 14922121 14922134 chr2R 14922217 14922220 4 94 6.0 2.0 4.0 0.8 99 chr2R 14922121 intron CG10249 - chr2R 14922170 intron CG10249 - chr2R 14922220 intron CG10249 - chr2R_4_14920001 chr2R_14920001 RAL-908 889 chr2R 14934441 14934452 chr2R 14934549 14934554 6 107 5.5 0.0 2.8 1.6 113 chr2R 14934441 intron CG10253 - chr2R 14934498 intron CG10253 - chr2R 14934554 intron CG10253 - chr2R_6_14930001 chr2R_14930001 RAL-908 890 chr2R 14939938 14939944 chr2R 14940038 14940044 4 100 8.5 9.0 8.8 0.4 106 chr2R 14939938 3` UTR Lap1 + chr2R 14939991 3` UTR Lap1 + chr2R 14940044 3` UTR Lap1 + chr2R_4_14935001 chr2R_14935001 RAL-908 891 chr2R 14968047 14968087 chr2R 14968146 14968186 8 98 7.5 4.0 5.8 1.2 139 chr2R 14968047 intron ckn + chr2R 14968116 intron ckn + chr2R 14968186 intron ckn + chr2R_8_14965001 chr2R_14965001 RAL-908 892 chr2R 15004703 15004753 chr2R 15005052 15005102 jockey 13 349 4.0 5.0 4.5 2.4 399 chr2R 15004703 intergenic not near genes chr2R 15004902 intergenic not near genes chr2R 15005102 intergenic not near genes chr2R_13_15000001 chr2R_15000001 RAL-908 893 chr2R 15015439 15015488 chr2R 15022883 15022928 mdg1 5 7441 3.0 1.5 2.2 1.6 7489 chr2R 15015439 intron hbs + chr2R 15019184 intron hbs + chr2R 15022928 intron hbs + chr2R_5_15015001 chr2R_15015001 RAL-908 894 chr2R 15065596 15065650 chr2R 15065692 15065717 5 91 1.5 0.5 1.0 2.5 121 chr2R 15065596 intergenic not near genes chr2R 15065656 intergenic not near genes chr2R 15065717 intergenic not near genes chr2R_5_15065001 chr2R_15065001 RAL-908 895 chr2R 15084963 15085003 chr2R 15092032 15092072 297 12 7069 2.5 5.5 4.0 2.4 7109 chr2R 15084963 intergenic not near genes chr2R 15088518 intergenic not near genes chr2R 15092072 5` UTR CR44457 + chr2R_12_15085001 chr2R_15085001 RAL-908 896 chr2R 15119318 15119351 chr2R 15127803 15127837 Tirant 9 8493 3.5 1.5 2.5 2.6 8519 chr2R 15119318 intron chn + chr2R 15123578 intron chn + chr2R 15127837 intron chn + chr2R_9_15120001 chr2R_15120001 RAL-908 897 chr2R 15133463 15133511 chr2R 15133562 15133604 8 89 5.5 5.0 5.2 1.3 141 chr2R 15133463 intron chn + chr2R 15133534 intron chn + chr2R 15133604 intron chn + chr2R_8_15130001 chr2R_15130001 RAL-908 898 chr2R 15149157 15149187 chr2R 15149256 15149286 6 99 0.0 2.5 1.2 2.7 129 chr2R 15149157 intron CG7544 + chr2R 15149222 3` UTR CG7544 + chr2R 15149286 3` UTR CG7544 + chr2R_6_15145001 chr2R_15145001 RAL-908 899 chr2R 15186160 15186212 chr2R 15186264 15186301 13 101 3.0 3.5 3.2 3.1 141 chr2R 15186160 intron igl + chr2R 15186230 intron igl + chr2R 15186301 intron igl + chr2R_13_15185001 chr2R_15185001 RAL-908 900 chr2R 15351309 15351320 chr2R 15351432 15351445 7 124 11.5 13.5 12.5 0.5 136 chr2R 15351309 intron unc-5 + chr2R 15351377 intron unc-5 + chr2R 15351445 intron unc-5 + chr2R_7_15350001 chr2R_15350001 RAL-908 901 chr2R 15375341 15375361 chr2R 15376178 15376197 6 836 1.0 5.0 3.0 1.5 856 chr2R 15375341 intergenic not near genes chr2R 15375769 intergenic not near genes chr2R 15376197 intergenic dup - chr2R_6_15375001 chr2R_15375001 RAL-908 902 chr2R 15606116 15606130 chr2R 15606213 15606227 4 97 7.0 3.0 5.0 0.7 111 chr2R 15606116 intergenic not near genes chr2R 15606172 intergenic not near genes chr2R 15606227 intergenic not near genes chr2R_4_15605001 chr2R_15605001 RAL-908 903 chr2R 15700226 15700265 chr2R 15700361 15700400 13 133 3.5 4.0 3.8 2.7 174 chr2R 15700226 intron,5` UTR CG30080 -,CG42662 - chr2R 15700313 intron,5` UTR CG30080 -,CG42662 - chr2R 15700400 intron,5` UTR CG30080 -,CG42662 - chr2R_13_15700001 chr2R_15700001 RAL-908 904 chr2R 15833516 15833535 chr2R 15833610 15833642 5 103 8.5 5.5 7.0 0.6 126 chr2R 15833516 intron,intron tun +,Poxn - chr2R 15833579 intron,intron tun +,Poxn - chr2R 15833642 intron,intron tun +,Poxn - chr2R_5_15830001 chr2R_15830001 RAL-908 905 chr2R 15833541 15833548 chr2R 15833608 15833647 4 89 6.5 5.0 5.8 0.6 106 chr2R 15833541 intron,intron tun +,Poxn - chr2R 15833594 intron,intron tun +,Poxn - chr2R 15833647 intron,intron tun +,Poxn - chr2R_4_15830001 chr2R_15830001 RAL-908 906 chr2R 15845130 15845178 chr2R 15845229 15845277 5 99 0.0 3.0 1.5 2.0 147 chr2R 15845130 intron,intron tun +,CG8249 - chr2R 15845204 intron,intron tun +,CG8249 - chr2R 15845277 intron,intron tun +,CG8249 - chr2R_5_15845001 chr2R_15845001 RAL-908 907 chr2R 15869316 15869364 chr2R 15869416 15869464 9 99 1.5 7.0 4.2 1.7 148 chr2R 15869316 intergenic Rif1 -,sli - chr2R 15869390 intergenic sli -,Rif1 - chr2R 15869464 intergenic sli -,Rif1 - chr2R_9_15865001 chr2R_15865001 RAL-908 908 chr2R 16033481 16033508 chr2R 16033588 16033615 15 107 8.5 0.5 4.5 2.7 134 chr2R 16033481 intron SP2353 + chr2R 16033548 intron SP2353 + chr2R 16033615 intron SP2353 + chr2R_15_16030001 chr2R_16030001 RAL-908 909 chr2R 16037209 16037227 chr2R 16037306 16037312 4 92 7.0 7.0 7.0 0.5 103 chr2R 16037209 intron SP2353 + chr2R 16037260 intron SP2353 + chr2R 16037312 intron SP2353 + chr2R_4_16035001 chr2R_16035001 RAL-908 910 chr2R 16279355 16279406 chr2R 16279460 16279511 12 104 0.0 2.0 1.0 6.0 156 chr2R 16279355 intergenic not near genes chr2R 16279433 intergenic not near genes chr2R 16279511 intergenic not near genes chr2R_12_16275001 chr2R_16275001 RAL-908 911 chr2R 16352826 16352867 chr2R 16352926 16352970 7 103 7.0 0.0 3.5 1.6 144 chr2R 16352826 intergenic not near genes chr2R 16352898 intergenic not near genes chr2R 16352970 intergenic not near genes chr2R_7_16350001 chr2R_16350001 RAL-908 912 chr2R 16496630 16496648 chr2R 16496726 16496747 10 99 6.0 7.0 6.5 1.3 117 chr2R 16496630 intergenic CG7813 - chr2R 16496688 intergenic CG7813 - chr2R 16496747 intergenic CG7813 - chr2R_10_16495001 chr2R_16495001 RAL-908 913 chr2R 16518027 16518072 chr2R 16518123 16518168 10 96 3.5 4.0 3.8 2.1 141 chr2R 16518027 intron Sema-2a + chr2R 16518098 intron Sema-2a + chr2R 16518168 intron Sema-2a + chr2R_10_16515001 chr2R_16515001 RAL-908 914 chr2R 16539629 16539659 chr2R 16544856 16544873 copia 7 5225 5.5 0.0 2.8 1.8 5244 chr2R 16539629 intergenic not near genes chr2R 16542251 intergenic not near genes chr2R 16544873 intergenic not near genes chr2R_7_16540001 chr2R_16540001 RAL-908 915 chr2R 16544856 16544875 chr2R 16544961 16544980 7 105 0.0 7.5 3.8 1.5 124 chr2R 16544856 intergenic not near genes chr2R 16544918 intergenic not near genes chr2R 16544980 intergenic not near genes chr2R_7_16540001 chr2R_16540001 RAL-908 916 chr2R 16571863 16571906 chr2R 16571978 16572021 17 112 5.5 3.5 4.5 3.1 158 chr2R 16571863 intergenic CG4927 + chr2R 16571942 intergenic CG4927 + chr2R 16572021 intergenic CG4927 + chr2R_17_16570001 chr2R_16570001 RAL-908 917 chr2R 16713054 16713062 chr2R 16713158 16713166 4 104 0.0 4.5 2.2 1.2 112 chr2R 16713054 intron CG30463 - chr2R 16713110 intron CG30463 - chr2R 16713166 intron CG30463 - chr2R_4_16710001 chr2R_16710001 RAL-908 918 chr2R 16737126 16737163 chr2R 16737246 16737263 10 118 3.5 3.5 3.5 2.2 137 chr2R 16737126 3` UTR CG43104 - chr2R 16737194 3` UTR CG43104 - chr2R 16737263 exon CG43104 - chr2R_10_16735001 chr2R_16735001 RAL-908 919 chr2R 16986226 16986246 chr2R 16986345 16986365 5 119 1.5 6.0 3.8 1.0 139 chr2R 16986226 intron Cbp53E + chr2R 16986296 intron Cbp53E + chr2R 16986365 intron Cbp53E + chr2R_5_16985001 chr2R_16985001 RAL-908 920 chr2R 17048601 17048652 chr2R 17048700 17048751 8 98 6.5 3.5 5.0 1.3 150 chr2R 17048601 3` UTR CG9642 + chr2R 17048676 3` UTR CG9642 + chr2R 17048751 3` UTR CG9642 + chr2R_8_17045001 chr2R_17045001 RAL-908 921 chr2R 17120264 17120288 chr2R 17120382 17120394 8 115 5.5 0.0 2.8 2.1 130 chr2R 17120264 exon Amy-p - chr2R 17120329 intergenic Amy-p - chr2R 17120394 intergenic Amy-p - chr2R_8_17120001 chr2R_17120001 RAL-908 922 chr2R 17147226 17147259 chr2R 17152277 17152310 jockey 11 5051 5.5 3.0 4.2 2.1 5084 chr2R 17147226 intergenic not near genes chr2R 17149768 intergenic not near genes chr2R 17152310 intergenic not near genes chr2R_11_17145001 chr2R_17145001 RAL-908 923 chr2R 17161336 17161351 chr2R 17161563 17161578 6 225 4.0 0.0 2.0 2.0 242 chr2R 17161336 intergenic not near genes chr2R 17161457 intergenic not near genes chr2R 17161578 intergenic not near genes chr2R_6_17160001 chr2R_17160001 RAL-908 924 chr2R 17183433 17183459 chr2R 17183531 17183572 6 105 2.0 0.0 1.0 3.0 139 chr2R 17183433 intergenic not near genes chr2R 17183502 intergenic not near genes chr2R 17183572 intergenic not near genes chr2R_6_17180001 chr2R_17180001 RAL-908 925 chr2R 17208853 17208901 chr2R 17208950 17208998 10 91 2.0 1.5 1.8 3.6 145 chr2R 17208853 intergenic not near genes chr2R 17208926 intergenic not near genes chr2R 17208998 intergenic not near genes chr2R_10_17205001 chr2R_17205001 RAL-908 926 chr2R 17236507 17236534 chr2R 17241714 17241758 copia 11 5222 5.5 2.5 4.0 2.2 5251 chr2R 17236507 intron mbl + chr2R 17239132 intron mbl + chr2R 17241758 intron mbl + chr2R_11_17235001 chr2R_17235001 RAL-908 927 chr2R 17250370 17250404 chr2R 17250470 17250504 10 100 4.5 1.5 3.0 2.5 134 chr2R 17250370 intron mbl + chr2R 17250437 intron mbl + chr2R 17250504 intron mbl + chr2R_10_17250001 chr2R_17250001 RAL-908 928 chr2R 17459009 17459032 chr2R 17459114 17459137 8 105 3.0 4.5 3.8 1.7 128 chr2R 17459009 intron CG14478 + chr2R 17459073 intron CG14478 + chr2R 17459137 intron CG14478 + chr2R_8_17455001 chr2R_17455001 RAL-908 929 chr2R 17470303 17470354 chr2R 17470403 17470454 17 96 5.0 2.5 3.8 3.5 151 chr2R 17470303 intron qkr54B + chr2R 17470378 intron qkr54B + chr2R 17470454 intron qkr54B + chr2R_17_17470001 chr2R_17470001 RAL-908 930 chr2R 17478815 17478862 chr2R 17478913 17478960 10 96 5.5 2.5 4.0 2.0 145 chr2R 17478815 3` UTR,intron CG43110 -,veil + chr2R 17478888 3` UTR,intron CG43110 -,veil + chr2R 17478960 3` UTR,intron CG43110 -,veil + chr2R_10_17475001 chr2R_17475001 RAL-908 931 chr2R 17485896 17485950 chr2R 17490686 17490738 F-element 10 4789 2.0 2.5 2.2 3.1 4842 chr2R 17485896 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488317 intron NT5E-2 + chr2R 17490738 intron NT5E-2 + chr2R_10_17485001 chr2R_17485001 RAL-908 932 chr2R 17561607 17561618 chr2R 17561684 17561717 5 95 3.5 4.5 4.0 1.0 110 chr2R 17561607 exon Klp54D + chr2R 17561662 intron Klp54D + chr2R 17561717 exon Klp54D + chr2R_5_17560001 chr2R_17560001 RAL-908 933 chr2R 17581741 17581782 chr2R 17581851 17581886 15 110 2.5 2.5 2.5 4.3 145 chr2R 17581741 intergenic Dcr-2 -,CG6484 - chr2R 17581814 intergenic CG6484 -,Dcr-2 - chr2R 17581886 intergenic CG6484 -,Dcr-2 - chr2R_15_17580001 chr2R_17580001 RAL-908 934 chr2R 17709961 17710111 chr2R 17710072 17710187 13 99 0.0 0.0 0.0 13.0 226 chr2R 17709961 intron CG6424 - chr2R 17710074 intron CG6424 - chr2R 17710187 intron CG6424 - chr2R_13_17710001 chr2R_17710001 RAL-908 935 chr2R 17720903 17720941 chr2R 17721006 17721044 14 102 5.0 3.5 4.2 2.7 141 chr2R 17720903 intergenic not near genes chr2R 17720974 intergenic not near genes chr2R 17721044 intergenic not near genes chr2R_14_17720001 chr2R_17720001 RAL-908 936 chr2R 17752404 17752445 chr2R 17752518 17752557 13 113 4.5 3.5 4.0 2.6 153 chr2R 17752404 exon CG5002 + chr2R 17752480 intron CG5002 + chr2R 17752557 exon CG5002 + chr2R_13_17750001 chr2R_17750001 RAL-908 937 chr2R 17782343 17782391 chr2R 17783566 17783614 pogo 19 1223 3.5 3.5 3.5 4.2 1271 chr2R 17782343 intergenic CG33981 -,fab1 - chr2R 17782978 intergenic not near genes chr2R 17783614 intergenic mir-31a - chr2R_19_17780001 chr2R_17780001 RAL-908 938 chr2R 17784008 17784053 chr2R 17784266 17784314 pogo 10 256 2.0 2.0 2.0 3.3 306 chr2R 17784008 intergenic mir-31a - chr2R 17784161 intergenic mir-31a - chr2R 17784314 intergenic mir-31a - chr2R_10_17780001 chr2R_17780001 RAL-908 939 chr2R 17843186 17843236 chr2R 17843294 17843343 5 107 0.0 1.0 0.5 3.3 157 chr2R 17843186 intergenic olf186-F + chr2R 17843264 intergenic olf186-F + chr2R 17843343 intergenic olf186-F + chr2R_5_17840001 chr2R_17840001 RAL-908 940 chr2R 17882964 17883007 chr2R 17884171 17884203 9 1201 25.0 28.0 26.5 0.3 1239 chr2R 17882964 intron Elk + chr2R 17883584 intron Elk + chr2R 17884203 intron Elk + chr2R_9_17880001 chr2R_17880001 RAL-908 941 chr2R 17886622 17886656 chr2R 17886717 17886758 5 98 2.5 3.5 3.0 1.2 136 chr2R 17886622 intron Elk + chr2R 17886690 intron Elk + chr2R 17886758 intron Elk + chr2R_5_17885001 chr2R_17885001 RAL-908 942 chr2R 17898860 17898887 chr2R 17898944 17898989 5 101 3.5 2.0 2.8 1.3 129 chr2R 17898860 intron Elk + chr2R 17898924 intron Elk + chr2R 17898989 intron Elk + chr2R_5_17895001 chr2R_17895001 RAL-908 943 chr2R 17928250 17928300 chr2R 17928364 17928414 11 111 4.0 3.5 3.8 2.3 164 chr2R 17928250 intergenic not near genes chr2R 17928332 intergenic not near genes chr2R 17928414 intergenic not near genes chr2R_11_17925001 chr2R_17925001 RAL-908 944 chr2R 17983401 17983425 chr2R 17983679 17983687 6 270 4.0 1.0 2.5 1.7 286 chr2R 17983401 intron dpr13 - chr2R 17983544 intron dpr13 - chr2R 17983687 intron dpr13 - chr2R_6_17980001 chr2R_17980001 RAL-908 945 chr2R 17989011 17989055 chr2R 17989116 17989161 10 104 0.5 4.0 2.2 3.1 150 chr2R 17989011 intron dpr13 - chr2R 17989086 intron dpr13 - chr2R 17989161 intron dpr13 - chr2R_10_17985001 chr2R_17985001 RAL-908 946 chr2R 18045654 18045699 chr2R 18046026 18046071 jockey 13 372 5.0 8.5 6.8 1.7 417 chr2R 18045654 intergenic not near genes chr2R 18045862 intergenic not near genes chr2R 18046071 intergenic CG5767 - chr2R_13_18045001 chr2R_18045001 RAL-908 947 chr2R 18074583 18074618 chr2R 18074679 18074714 10 93 3.0 2.5 2.8 2.6 131 chr2R 18074583 intron CG34386 + chr2R 18074648 intron CG34386 + chr2R 18074714 intron CG34386 + chr2R_10_18070001 chr2R_18070001 RAL-908 948 chr2R 18075953 18075999 chr2R 18076067 18076113 4 114 1.0 3.0 2.0 1.3 160 chr2R 18075953 intron CG34386 + chr2R 18076033 intron CG34386 + chr2R 18076113 intron CG34386 + chr2R_4_18075001 chr2R_18075001 RAL-908 949 chr2R 18111665 18111713 chr2R 18115553 18115580 F-element 7 3885 3.0 8.5 5.8 1.0 3915 chr2R 18111665 intergenic not near genes chr2R 18113622 intergenic not near genes chr2R 18115580 intergenic not near genes chr2R_7_18110001 chr2R_18110001 RAL-908 950 chr2R 18124321 18124373 chr2R 18124418 18124469 17 97 2.5 4.0 3.2 4.0 148 chr2R 18124321 intron stau - chr2R 18124395 intron stau - chr2R 18124469 intron stau - chr2R_17_18120001 chr2R_18120001 RAL-908 951 chr2R 18197881 18197908 chr2R 18197998 18198025 7 116 4.5 2.0 3.2 1.7 144 chr2R 18197881 intergenic not near genes chr2R 18197953 intergenic not near genes chr2R 18198025 intergenic not near genes chr2R_7_18195001 chr2R_18195001 RAL-908 952 chr2R 18308263 18308314 chr2R 18308389 18308440 10 125 2.5 2.5 2.5 2.9 177 chr2R 18308263 intron sbb - chr2R 18308352 intron sbb - chr2R 18308440 intron sbb - chr2R_10_18305001 chr2R_18305001 RAL-908 953 chr2R 18358373 18358417 chr2R 18372605 18372649 roo 14 14232 5.5 4.0 4.8 2.4 14276 chr2R 18358373 intergenic not near genes chr2R 18365511 intergenic not near genes chr2R 18372649 intergenic not near genes chr2R_14_18365001 chr2R_18365001 RAL-908 954 chr2R 18405732 18405785 chr2R 18405833 18405885 9 100 3.5 0.0 1.8 3.2 153 chr2R 18405732 intergenic GstE6 +,GstE5 + chr2R 18405808 intergenic GstE6 +,GstE5 + chr2R 18405885 intergenic GstE6 + chr2R_9_18405001 chr2R_18405001 RAL-908 955 chr2R 18408264 18408312 chr2R 18408405 18408432 15 139 1.0 2.5 1.8 5.4 168 chr2R 18408264 exon GstE8 + chr2R 18408348 exon GstE8 + chr2R 18408432 exon GstE8 + chr2R_15_18405001 chr2R_18405001 RAL-908 956 chr2R 18463680 18463687 chr2R 18463801 18463808 4 121 4.0 2.5 3.2 1.0 128 chr2R 18463680 intron CG30116 - chr2R 18463744 intron CG30116 - chr2R 18463808 intron CG30116 - chr2R_4_18460001 chr2R_18460001 RAL-908 957 chr2R 18575803 18575811 chr2R 18581987 18581988 3S18 5 6194 3.0 6.0 4.5 0.9 6185 chr2R 18575803 intron GEFmeso - chr2R 18578896 intron GEFmeso - chr2R 18581988 intron GEFmeso - chr2R_5_18575001 chr2R_18575001 RAL-908 958 chr2R 18575812 18575826 chr2R 18581983 18582034 3S18 5 6197 2.0 6.0 4.0 1.0 6222 chr2R 18575812 intron GEFmeso - chr2R 18578923 intron GEFmeso - chr2R 18582034 intron GEFmeso - chr2R_5_18575001 chr2R_18575001 RAL-908 959 chr2R 18585798 18585819 chr2R 18585882 18585917 8 94 2.5 3.5 3.0 2.0 119 chr2R 18585798 intron GEFmeso - chr2R 18585858 intron GEFmeso - chr2R 18585917 intron GEFmeso - chr2R_8_18585001 chr2R_18585001 RAL-908 960 chr2R 18590855 18590900 chr2R 18600025 18600068 roo 7 9170 1.0 2.0 1.5 2.8 9213 chr2R 18590855 intron GEFmeso - chr2R 18595462 intron GEFmeso - chr2R 18600068 intron GEFmeso - chr2R_7_18595001 chr2R_18595001 RAL-908 961 chr2R 18601116 18601164 chr2R 18601213 18601261 10 94 3.5 8.0 5.8 1.5 145 chr2R 18601116 intron GEFmeso - chr2R 18601188 intron GEFmeso - chr2R 18601261 intron GEFmeso - chr2R_10_18600001 chr2R_18600001 RAL-908 962 chr2R 18646393 18646405 chr2R 18646558 18646570 6 165 12.0 3.0 7.5 0.7 177 chr2R 18646393 intron SP2637 - chr2R 18646482 intron SP2637 - chr2R 18646570 intron SP2637 - chr2R_6_18645001 chr2R_18645001 RAL-908 963 chr2R 18646406 18646433 chr2R 18646557 18646598 9 163 7.0 3.0 5.0 1.5 192 chr2R 18646406 intron SP2637 - chr2R 18646502 intron SP2637 - chr2R 18646598 intron SP2637 - chr2R_9_18645001 chr2R_18645001 RAL-908 964 chr2R 18652333 18652357 chr2R 18652434 18652448 10 100 0.0 1.5 0.8 5.6 115 chr2R 18652333 intron SP2637 - chr2R 18652390 intron SP2637 - chr2R 18652448 intron SP2637 - chr2R_10_18650001 chr2R_18650001 RAL-908 965 chr2R 18675159 18675166 chr2R 18675257 18675264 4 96 0.0 8.0 4.0 0.8 105 chr2R 18675159 intergenic not near genes chr2R 18675212 intergenic not near genes chr2R 18675264 intergenic not near genes chr2R_4_18675001 chr2R_18675001 RAL-908 966 chr2R 18686913 18686937 chr2R 18687186 18687223 6 283 0.0 3.0 1.5 2.4 310 chr2R 18686913 intergenic CG44433 -,CG42855 + chr2R 18687068 intergenic CG44433 -,CG42855 + chr2R 18687223 intergenic CG42855 +,CG44433 - chr2R_6_18685001 chr2R_18685001 RAL-908 967 chr2R 18717328 18717372 chr2R 18717535 18717559 9 205 2.5 4.5 3.5 2.0 231 chr2R 18717328 intergenic not near genes chr2R 18717444 intergenic not near genes chr2R 18717559 intergenic not near genes chr2R_9_18715001 chr2R_18715001 RAL-908 968 chr2R 18808134 18808188 chr2R 18808230 18808284 11 90 3.0 1.5 2.2 3.4 150 chr2R 18808134 intergenic CG15096 - chr2R 18808209 intergenic CG15096 - chr2R 18808284 intergenic CG15096 - chr2R_11_18805001 chr2R_18805001 RAL-908 969 chr2R 18857391 18857404 chr2R 18857487 18857500 8 96 1.5 2.5 2.0 2.7 109 chr2R 18857391 exon Jheh2 - chr2R 18857446 intron Jheh2 - chr2R 18857500 intron Jheh2 - chr2R_8_18855001 chr2R_18855001 RAL-908 970 chr2R 18926484 18926528 chr2R 18926591 18926635 10 107 3.0 0.0 1.5 4.0 151 chr2R 18926484 intron sano + chr2R 18926560 intron sano + chr2R 18926635 intron sano + chr2R_10_18925001 chr2R_18925001 RAL-908 971 chr2R 18930433 18930482 chr2R 18930546 18930595 14 113 5.0 5.0 5.0 2.3 162 chr2R 18930433 intron sano + chr2R 18930514 intron sano + chr2R 18930595 intron sano + chr2R_14_18930001 chr2R_18930001 RAL-908 972 chr2R 18964919 18964941 chr2R 18965015 18965037 7 96 6.5 6.5 6.5 0.9 118 chr2R 18964919 intergenic not near genes chr2R 18964978 intergenic not near genes chr2R 18965037 intergenic not near genes chr2R_7_18960001 chr2R_18960001 RAL-908 973 chr2R 18992001 18992041 chr2R 18992160 18992197 12 160 2.5 4.0 3.2 2.9 196 chr2R 18992001 intron tn + chr2R 18992099 intron tn + chr2R 18992197 intron tn + chr2R_12_18990001 chr2R_18990001 RAL-908 974 chr2R 19012928 19012964 chr2R 19013035 19013051 10 110 4.0 5.0 4.5 1.8 123 chr2R 19012928 intergenic not near genes chr2R 19012990 intergenic not near genes chr2R 19013051 intergenic not near genes chr2R_10_19010001 chr2R_19010001 RAL-908 975 chr2R 19067705 19067752 chr2R 19067801 19067848 19 96 3.5 2.0 2.8 5.0 143 chr2R 19067705 intron 5-HT1A + chr2R 19067776 intron 5-HT1A + chr2R 19067848 intron 5-HT1A + chr2R_19_19065001 chr2R_19065001 RAL-908 976 chr2R 19185627 19185668 chr2R 19185856 19185886 7 216 1.5 2.0 1.8 2.5 259 chr2R 19185627 intron hppy + chr2R 19185756 intron hppy + chr2R 19185886 intron hppy + chr2R_7_19185001 chr2R_19185001 RAL-908 977 chr2R 19300944 19300991 chr2R 19301045 19301094 20 101 0.5 1.5 1.0 10.0 150 chr2R 19300944 intron Tab2 + chr2R 19301019 intron Tab2 + chr2R 19301094 intron Tab2 + chr2R_20_19300001 chr2R_19300001 RAL-908 978 chr2R 19351688 19351715 chr2R 19352541 19352555 7 851 10.0 4.5 7.2 0.9 867 chr2R 19351688 intron Rgk1 - chr2R 19352122 intron Rgk1 - chr2R 19352555 intron Rgk1 - chr2R_7_19350001 chr2R_19350001 RAL-908 979 chr2R 19380054 19380104 chr2R 19380283 19380333 14 226 5.5 5.0 5.2 2.3 279 chr2R 19380054 3` UTR CG10062 + chr2R 19380194 intergenic CG10062 +,CG10073 + chr2R 19380333 intergenic CG10062 +,CG10073 + chr2R_14_19380001 chr2R_19380001 RAL-908 980 chr2R 19385099 19385139 chr2R 19385662 19385702 17 563 3.0 9.0 6.0 2.4 603 chr2R 19385099 intergenic CG10073 + chr2R 19385400 intergenic CG10073 + chr2R 19385702 intergenic CG10081 + chr2R_17_19385001 chr2R_19385001 RAL-908 981 chr2R 19554470 19554505 chr2R 19555725 19555727 6 1253 2.5 3.0 2.8 1.6 1257 chr2R 19554470 intron sm - chr2R 19555098 intron sm - chr2R 19555727 intron sm - chr2R_6_19555001 chr2R_19555001 RAL-908 982 chr2R 19637501 19637550 chr2R 19637696 19637745 8 195 2.5 4.5 3.5 1.8 244 chr2R 19637501 5` UTR mir-4983 + chr2R 19637623 intron CG43277 + chr2R 19637745 exon CG43277 + chr2R_8_19635001 chr2R_19635001 RAL-908 983 chr2R 19776579 19776622 chr2R 19779922 19779965 jockey 17 3342 2.5 3.5 3.0 4.2 3386 chr2R 19776579 intergenic not near genes chr2R 19778272 intergenic not near genes chr2R 19779965 intergenic not near genes chr2R_17_19775001 chr2R_19775001 RAL-908 984 chr2R 19802010 19802026 chr2R 19802242 19802258 6 232 3.5 0.5 2.0 2.0 248 chr2R 19802010 intergenic not near genes chr2R 19802134 intergenic not near genes chr2R 19802258 intergenic not near genes chr2R_6_19800001 chr2R_19800001 RAL-908 985 chr2R 19823954 19823991 chr2R 19824308 19824354 10 358 4.5 5.5 5.0 1.7 400 chr2R 19823954 intergenic not near genes chr2R 19824154 intergenic not near genes chr2R 19824354 intergenic not near genes chr2R_10_19820001 chr2R_19820001 RAL-908 986 chr2R 19832188 19832236 chr2R 19832293 19832341 12 105 9.0 7.5 8.2 1.3 153 chr2R 19832188 3` UTR Toll-7 + chr2R 19832264 3` UTR Toll-7 + chr2R 19832341 3` UTR Toll-7 + chr2R_12_19830001 chr2R_19830001 RAL-908 987 chr2R 19914828 19914877 chr2R 19922260 19922309 mdg1 4 7432 5.0 2.0 3.5 0.9 7481 chr2R 19914828 intergenic not near genes chr2R 19918568 intergenic not near genes chr2R 19922309 intergenic not near genes chr2R_4_19915001 chr2R_19915001 RAL-908 988 chr2R 19926004 19926035 chr2R 19926107 19926138 10 103 3.0 5.5 4.2 1.9 134 chr2R 19926004 intergenic CR44626 - chr2R 19926071 intergenic CR44626 - chr2R 19926138 intergenic CR44626 - chr2R_10_19925001 chr2R_19925001 RAL-908 989 chr2R 19981658 19981671 chr2R 19981754 19981767 4 96 6.5 2.5 4.5 0.7 109 chr2R 19981658 intron CG8654 + chr2R 19981712 intron CG8654 + chr2R 19981767 intron CG8654 + chr2R_4_19980001 chr2R_19980001 RAL-908 990 chr2R 19981682 19981696 chr2R 19981749 19981749 4 68 4.5 2.5 3.5 0.9 67 chr2R 19981682 intron CG8654 + chr2R 19981716 intron CG8654 + chr2R 19981749 intron CG8654 + chr2R_4_19980001 chr2R_19980001 RAL-908 991 chr2R 20015773 20015828 chr2R 20015927 20015980 5 153 3.5 4.0 3.8 1.0 207 chr2R 20015773 intergenic not near genes chr2R 20015876 intergenic not near genes chr2R 20015980 intergenic not near genes chr2R_5_20015001 chr2R_20015001 RAL-908 992 chr2R 20069231 20069249 chr2R 20071889 20071907 opus 6 2658 0.0 4.5 2.2 1.9 2676 chr2R 20069231 intergenic not near genes chr2R 20070569 intergenic not near genes chr2R 20071907 intergenic not near genes chr2R_6_20070001 chr2R_20070001 RAL-908 993 chr2R 20118857 20118898 chr2R 20118965 20119006 6 107 1.5 2.5 2.0 2.0 149 chr2R 20118857 intergenic not near genes chr2R 20118932 intergenic not near genes chr2R 20119006 intergenic not near genes chr2R_6_20115001 chr2R_20115001 RAL-908 994 chr2R 20125729 20125744 chr2R 20125825 20125840 6 96 5.5 10.0 7.8 0.7 111 chr2R 20125729 intergenic not near genes chr2R 20125784 intergenic not near genes chr2R 20125840 intergenic not near genes chr2R_6_20125001 chr2R_20125001 RAL-908 995 chr2R 20162662 20162698 chr2R 20162799 20162835 9 137 5.5 6.5 6.0 1.3 173 chr2R 20162662 intergenic not near genes chr2R 20162748 intergenic not near genes chr2R 20162835 intergenic not near genes chr2R_9_20160001 chr2R_20160001 RAL-908 996 chr2R 20326766 20326786 chr2R 20326863 20326883 6 97 5.0 8.5 6.8 0.8 117 chr2R 20326766 5` UTR MED8 - chr2R 20326824 intergenic MED8 -,CG8929 + chr2R 20326883 intergenic MED8 -,CG8929 + chr2R_6_20325001 chr2R_20325001 RAL-908 997 chr2R 20338737 20338763 chr2R 20338837 20338863 11 100 15.5 6.0 10.8 0.9 126 chr2R 20338737 intergenic not near genes chr2R 20338800 intergenic not near genes chr2R 20338863 intergenic not near genes chr2R_11_20335001 chr2R_20335001 RAL-908 998 chr2R 20439048 20439076 chr2R 20439144 20439170 5 95 3.5 4.0 3.8 1.0 122 chr2R 20439048 intron CG12484 + chr2R 20439109 intron CG12484 + chr2R 20439170 intron CG12484 + chr2R_5_20435001 chr2R_20435001 RAL-908 999 chr2R 20504745 20504796 chr2R 20504842 20504893 9 96 2.5 0.5 1.5 3.6 148 chr2R 20504745 exon Obp57b + chr2R 20504819 3` UTR Obp57b + chr2R 20504893 3` UTR Obp57b + chr2R_9_20500001 chr2R_20500001 RAL-908 1000 chr2R 20519762 20519803 chr2R 20519921 20519955 7 151 3.0 6.5 4.8 1.2 193 chr2R 20519762 intergenic not near genes chr2R 20519858 intergenic not near genes chr2R 20519955 intergenic not near genes chr2R_7_20515001 chr2R_20515001 RAL-908 1001 chr2R 20523017 20523071 chr2R 20523148 20523197 9 125 1.0 1.5 1.2 4.1 180 chr2R 20523017 intergenic not near genes chr2R 20523107 intergenic not near genes chr2R 20523197 intergenic not near genes chr2R_9_20520001 chr2R_20520001 RAL-908 1002 chr2R 20568396 20568456 chr2R 20568494 20568556 4 100 0.5 0.5 0.5 2.7 160 chr2R 20568396 intron qsm - chr2R 20568476 intron qsm - chr2R 20568556 intron qsm - chr2R_4_20565001 chr2R_20565001 RAL-908 1003 chr2R 20702676 20702703 chr2R 20702752 20702799 6 93 4.5 4.5 4.5 1.1 123 chr2R 20702676 intron dpr + chr2R 20702738 intron dpr + chr2R 20702799 intron dpr + chr2R_6_20700001 chr2R_20700001 RAL-908 1004 chr2R 20739447 20739471 chr2R 20744234 20744259 F-element 5 4787 2.5 2.0 2.2 1.6 4812 chr2R 20739447 intron dpr + chr2R 20741853 intron dpr + chr2R 20744259 intron dpr + chr2R_5_20740001 chr2R_20740001 RAL-908 1005 chr2R 20783294 20783331 chr2R 20788086 20788123 F-element 12 4790 2.5 3.0 2.8 3.2 4829 chr2R 20783294 intergenic not near genes chr2R 20785708 intergenic not near genes chr2R 20788123 intergenic CG43666 - chr2R_12_20785001 chr2R_20785001 RAL-908 1006 chr2R 20799160 20799197 chr2R 20799271 20799314 10 115 0.0 5.0 2.5 2.9 154 chr2R 20799160 intergenic not near genes chr2R 20799237 intergenic not near genes chr2R 20799314 intergenic not near genes chr2R_10_20795001 chr2R_20795001 RAL-908 1007 chr2R 20838065 20838084 chr2R 20838166 20838185 11 100 0.5 4.0 2.2 3.4 120 chr2R 20838065 intron CR44667 + chr2R 20838125 intron CR44667 + chr2R 20838185 intron CR44667 + chr2R_11_20835001 chr2R_20835001 RAL-908 1008 chr2R 20862314 20862347 chr2R 20862428 20862461 5 114 1.5 5.5 3.5 1.1 147 chr2R 20862314 intergenic not near genes chr2R 20862388 intergenic not near genes chr2R 20862461 intergenic not near genes chr2R_5_20860001 chr2R_20860001 RAL-908 1009 chr2R 20863099 20863138 chr2R 20863205 20863229 9 103 4.0 2.0 3.0 2.2 130 chr2R 20863099 intergenic not near genes chr2R 20863164 intergenic not near genes chr2R 20863229 intergenic not near genes chr2R_9_20860001 chr2R_20860001 RAL-908 1010 chr2R 20889523 20889571 chr2R 20889681 20889729 4 158 0.5 5.0 2.8 1.1 206 chr2R 20889523 intron otp - chr2R 20889626 intron otp - chr2R 20889729 intron otp - chr2R_4_20885001 chr2R_20885001 RAL-908 1011 chr2R 20938084 20938109 chr2R 20938181 20938206 9 97 8.0 2.5 5.2 1.5 122 chr2R 20938084 intergenic not near genes chr2R 20938145 intergenic not near genes chr2R 20938206 intergenic not near genes chr2R_9_20935001 chr2R_20935001 RAL-908 1012 chr2R 20962887 20962938 chr2R 20963005 20963056 14 116 2.0 2.0 2.0 4.7 169 chr2R 20962887 intergenic not near genes chr2R 20962972 intergenic not near genes chr2R 20963056 intergenic not near genes chr2R_14_20960001 chr2R_20960001 RAL-908 1013 chr2R 20967017 20967053 chr2R 20967114 20967150 7 97 5.5 0.0 2.8 1.8 133 chr2R 20967017 intergenic not near genes chr2R 20967084 intergenic not near genes chr2R 20967150 intergenic not near genes chr2R_7_20965001 chr2R_20965001 RAL-908 1014 chr2R 21103531 21103553 chr2R 21103631 21103653 7 99 1.5 0.0 0.8 3.9 122 chr2R 21103531 intron ktub + chr2R 21103592 intron ktub + chr2R 21103653 intron ktub + chr2R_7_21100001 chr2R_21100001 RAL-908 1015 chr2R 21113459 21113482 chr2R 21113568 21113591 10 109 6.5 6.0 6.2 1.4 132 chr2R 21113459 intron ktub + chr2R 21113525 intron ktub + chr2R 21113591 intron ktub + chr2R_10_21110001 chr2R_21110001 RAL-908 1016 chr2R 21151099 21151143 chr2R 21153752 21153796 opus 11 2652 3.5 2.5 3.0 2.8 2697 chr2R 21151099 intron CG30389 - chr2R 21152448 intron CG30389 - chr2R 21153796 intron CG30389 - chr2R_11_21150001 chr2R_21150001 RAL-908 1017 chr2R 21258457 21258495 chr2R 21258555 21258593 4 98 0.0 3.0 1.5 1.6 136 chr2R 21258457 intron Rgk3 + chr2R 21258525 intron Rgk3 + chr2R 21258593 intron Rgk3 + chr2R_4_21255001 chr2R_21255001 RAL-908 1018 chr2R 21285418 21285433 chr2R 21285514 21285519 8 95 8.0 7.0 7.5 0.9 101 chr2R 21285418 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285468 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285519 3` UTR,3` UTR MFS16 +,CG10505 - chr2R_8_21285001 chr2R_21285001 RAL-908 1019 chr2R 21322925 21322973 chr2R 21323029 21323067 7 96 3.5 2.5 3.0 1.8 142 chr2R 21322925 5` UTR CG30394 - chr2R 21322996 5` UTR CG30394 - chr2R 21323067 5` UTR CG30394 - chr2R_7_21320001 chr2R_21320001 RAL-908 1020 chr2R 21410057 21410112 chr2R 21410156 21410211 16 99 3.0 3.0 3.0 4.0 154 chr2R 21410057 intron Sdc - chr2R 21410134 intron Sdc - chr2R 21410211 intron Sdc - chr2R_16_21410001 chr2R_21410001 RAL-908 1021 chr2R 21421318 21421350 chr2R 21421417 21421449 12 99 5.5 4.0 4.8 2.1 131 chr2R 21421318 intron Sdc - chr2R 21421384 intron Sdc - chr2R 21421449 intron Sdc - chr2R_12_21420001 chr2R_21420001 RAL-908 1022 chr2R 21429346 21429362 chr2R 21429456 21429472 4 110 5.5 4.5 5.0 0.7 126 chr2R 21429346 intron Sdc - chr2R 21429409 intron Sdc - chr2R 21429472 intron Sdc - chr2R_4_21425001 chr2R_21425001 RAL-908 1023 chr2R 21472295 21472330 chr2R 21472393 21472428 11 97 3.5 4.0 3.8 2.3 133 chr2R 21472295 intron Sdc - chr2R 21472362 intron Sdc - chr2R 21472428 intron Sdc - chr2R_11_21470001 chr2R_21470001 RAL-908 1024 chr2R 21540667 21540696 chr2R 21540905 21540934 13 238 2.0 4.0 3.0 3.2 267 chr2R 21540667 intron Egfr + chr2R 21540800 intron Egfr + chr2R 21540934 intron Egfr + chr2R_13_21540001 chr2R_21540001 RAL-908 1025 chr2R 21660859 21660902 chr2R 21660972 21661015 6 112 14.0 16.0 15.0 0.4 156 chr2R 21660859 intergenic pirk - chr2R 21660937 intergenic pirk - chr2R 21661015 3` UTR pirk - chr2R_6_21660001 chr2R_21660001 RAL-908 1026 chr2R 21738273 21738300 chr2R 21747444 21747455 roo 4 9170 2.0 1.0 1.5 1.6 9182 chr2R 21738273 intergenic not near genes chr2R 21742864 intergenic not near genes chr2R 21747455 intergenic not near genes chr2R_4_21740001 chr2R_21740001 RAL-908 1027 chr2R 21753064 21753106 chr2R 21753568 21753611 roo 11 504 3.5 4.5 4.0 2.2 547 chr2R 21753064 intergenic not near genes chr2R 21753338 intergenic not near genes chr2R 21753611 intergenic not near genes chr2R_11_21750001 chr2R_21750001 RAL-908 1028 chr2R 21772214 21772257 chr2R 21772315 21772358 11 99 4.5 6.5 5.5 1.7 144 chr2R 21772214 intergenic not near genes chr2R 21772286 intergenic not near genes chr2R 21772358 intergenic not near genes chr2R_11_21770001 chr2R_21770001 RAL-908 1029 chr2R 21774755 21774760 chr2R 22652322 22652327 6 877567 18.0 2.0 10.0 0.5 877572 chr2R 21774755 3` UTR CG4021 + chr2R 22213541 intron ari-2 + chr2R 22652327 3` UTR nsr + chr2R_6_22210001 chr2R_22210001 RAL-908 1030 chr2R 21809507 21809558 chr2R 21817767 21817813 roo 13 8257 4.0 3.5 3.8 2.7 8306 chr2R 21809507 intergenic not near genes chr2R 21813660 intergenic not near genes chr2R 21817813 intergenic not near genes chr2R_13_21810001 chr2R_21810001 RAL-908 1031 chr2R 21888299 21888320 chr2R 21888410 21888431 5 110 1.5 4.0 2.8 1.3 132 chr2R 21888299 intron Fili + chr2R 21888365 intron Fili + chr2R 21888431 intron Fili + chr2R_5_21885001 chr2R_21885001 RAL-908 1032 chr2R 21938186 21938218 chr2R 21938288 21938320 4 102 12.0 11.0 11.5 0.3 134 chr2R 21938186 intron Fili + chr2R 21938253 intron Fili + chr2R 21938320 intron Fili + chr2R_4_21935001 chr2R_21935001 RAL-908 1033 chr2R 21946750 21946804 chr2R 21946866 21946920 8 116 2.0 4.0 3.0 2.0 170 chr2R 21946750 intergenic Fili + chr2R 21946835 intergenic not near genes chr2R 21946920 intergenic not near genes chr2R_8_21945001 chr2R_21945001 RAL-908 1034 chr2R 21985533 21985563 chr2R 21985634 21985664 7 100 7.5 2.0 4.8 1.2 131 chr2R 21985533 intergenic CG30401 - chr2R 21985598 intergenic CG30401 - chr2R 21985664 3` UTR CG30401 - chr2R_7_21985001 chr2R_21985001 RAL-908 1035 chr2R 22012976 22013011 chr2R 22013091 22013126 6 115 3.0 6.0 4.5 1.1 150 chr2R 22012976 intron CG34370 - chr2R 22013051 intron CG34370 - chr2R 22013126 intron CG34370 - chr2R_6_22010001 chr2R_22010001 RAL-908 1036 chr2R 22029459 22029505 chr2R 22029617 22029663 8 158 6.0 6.0 6.0 1.1 204 chr2R 22029459 intron CG34370 - chr2R 22029561 intron CG34370 - chr2R 22029663 intron CG34370 - chr2R_8_22025001 chr2R_22025001 RAL-908 1037 chr2R 22050863 22050909 chr2R 22050987 22051033 8 121 2.0 7.5 4.8 1.4 170 chr2R 22050863 intergenic not near genes chr2R 22050948 intergenic not near genes chr2R 22051033 intergenic not near genes chr2R_8_22050001 chr2R_22050001 RAL-908 1038 chr2R 22102098 22102160 chr2R 22102206 22102243 8 101 2.0 2.0 2.0 2.7 145 chr2R 22102098 intergenic not near genes chr2R 22102170 intergenic not near genes chr2R 22102243 intergenic not near genes chr2R_8_22100001 chr2R_22100001 RAL-908 1039 chr2R 22109265 22109298 chr2R 22109362 22109395 7 97 1.5 2.0 1.8 2.5 130 chr2R 22109265 intron Vrp1 - chr2R 22109330 intron Vrp1 - chr2R 22109395 intron Vrp1 - chr2R_7_22105001 chr2R_22105001 RAL-908 1040 chr2R 22132271 22132286 chr2R 22132371 22132386 5 100 5.0 3.5 4.2 1.0 115 chr2R 22132271 intergenic not near genes chr2R 22132328 intergenic not near genes chr2R 22132386 intergenic not near genes chr2R_5_22130001 chr2R_22130001 RAL-908 1041 chr2R 22161727 22161747 chr2R 22161888 22161905 6 160 5.0 7.0 6.0 0.9 178 chr2R 22161727 intron a + chr2R 22161816 intron a + chr2R 22161905 intron a + chr2R_6_22160001 chr2R_22160001 RAL-908 1042 chr2R 22185670 22185694 chr2R 22185789 22185813 8 119 4.0 3.0 3.5 1.8 143 chr2R 22185670 3` UTR MED16 + chr2R 22185742 3` UTR MED16 + chr2R 22185813 3` UTR MED16 + chr2R_8_22185001 chr2R_22185001 RAL-908 1043 chr2R 22272060 22272096 chr2R 22272182 22272218 9 122 5.0 6.0 5.5 1.4 158 chr2R 22272060 intron dve + chr2R 22272139 intron dve + chr2R 22272218 intron dve + chr2R_9_22270001 chr2R_22270001 RAL-908 1044 chr2R 22349689 22349723 chr2R 22351487 22351527 jockey 7 1803 5.5 4.0 4.8 1.2 1838 chr2R 22349689 intron Liprin-gamma - chr2R 22350608 intron Liprin-gamma - chr2R 22351527 intron Liprin-gamma - chr2R_7_22350001 chr2R_22350001 RAL-908 1045 chr2R 22362641 22362679 chr2R 22362740 22362778 9 99 3.0 3.0 3.0 2.2 137 chr2R 22362641 intron Liprin-gamma - chr2R 22362710 intron Liprin-gamma - chr2R 22362778 intron Liprin-gamma - chr2R_9_22360001 chr2R_22360001 RAL-908 1046 chr2R 22370762 22370780 chr2R 22370859 22370877 5 97 1.5 3.5 2.5 1.4 115 chr2R 22370762 intron Liprin-gamma - chr2R 22370820 intron Liprin-gamma - chr2R 22370877 intron Liprin-gamma - chr2R_5_22370001 chr2R_22370001 RAL-908 1047 chr2R 22460363 22460399 chr2R 22460462 22460498 11 99 3.0 4.0 3.5 2.4 135 chr2R 22460363 intron CG10384 + chr2R 22460430 intron CG10384 + chr2R 22460498 intron CG10384 + chr2R_11_22460001 chr2R_22460001 RAL-908 1048 chr2R 22461324 22461355 chr2R 22461431 22461462 8 104 4.0 5.0 4.5 1.5 138 chr2R 22461324 intron CG10384 + chr2R 22461393 intron CG10384 + chr2R 22461462 intron CG10384 + chr2R_8_22460001 chr2R_22460001 RAL-908 1049 chr2R 22503855 22503887 chr2R 22504063 22504085 5 206 2.0 2.5 2.2 1.6 230 chr2R 22503855 intron px - chr2R 22503970 intron px - chr2R 22504085 intron px - chr2R_5_22500001 chr2R_22500001 RAL-908 1050 chr2R 22525738 22525784 chr2R 22529313 22529341 jockey 12 3572 2.5 4.5 3.5 2.7 3603 chr2R 22525738 intron px - chr2R 22527540 intron px - chr2R 22529341 intron px - chr2R_12_22525001 chr2R_22525001 RAL-908 1051 chr2R 22574137 22574177 chr2R 22574235 22574267 6 99 2.0 4.5 3.2 1.4 130 chr2R 22574137 intron dnr1 - chr2R 22574202 intron dnr1 - chr2R 22574267 intron dnr1 - chr2R_6_22570001 chr2R_22570001 RAL-908 1052 chr2R 22580424 22580444 chr2R 22586582 22586608 diver 4 6162 7.5 4.0 5.8 0.6 6184 chr2R 22580424 intron dnr1 - chr2R 22583516 intron dnr1 - chr2R 22586608 intron dnr1 - chr2R_4_22580001 chr2R_22580001 RAL-908 1053 chr2R 22663119 22663166 chr2R 22663219 22663266 13 100 1.5 3.0 2.2 4.1 147 chr2R 22663119 3` UTR CG42566 + chr2R 22663192 3` UTR CG42566 + chr2R 22663266 intergenic CG42566 +,CG4250 + chr2R_13_22660001 chr2R_22660001 RAL-908 1054 chr2R 22789801 22789829 chr2R 22790107 22790135 8 306 4.5 2.5 3.5 1.8 334 chr2R 22789801 intron CG42260 - chr2R 22789968 intron CG42260 - chr2R 22790135 intron CG42260 - chr2R_8_22785001 chr2R_22785001 RAL-908 1055 chr2R 22907403 22907429 chr2R 22907515 22907522 4 105 3.0 5.5 4.2 0.8 119 chr2R 22907403 intron nahoda + chr2R 22907462 intron nahoda + chr2R 22907522 intron nahoda + chr2R_4_22905001 chr2R_22905001 RAL-908 1056 chr2R 22991614 22991639 chr2R 22991726 22991743 7 111 4.0 1.0 2.5 2.0 129 chr2R 22991614 intron twi + chr2R 22991678 intron twi + chr2R 22991743 intron twi + chr2R_7_22990001 chr2R_22990001 RAL-908 1057 chr2R 23045318 23045361 chr2R 23045552 23045594 10 231 4.5 6.5 5.5 1.5 276 chr2R 23045318 intron twi + chr2R 23045456 intron twi + chr2R 23045594 intron twi + chr2R_10_23045001 chr2R_23045001 RAL-908 1058 chr2R 23052632 23052682 chr2R 23052728 23052754 18 94 3.5 2.5 3.0 4.5 122 chr2R 23052632 intergenic not near genes chr2R 23052693 intergenic not near genes chr2R 23052754 intergenic not near genes chr2R_18_23050001 chr2R_23050001 RAL-908 1059 chr2R 23130527 23130574 chr2R 23130639 23130688 11 112 2.5 3.0 2.8 2.9 161 chr2R 23130527 intergenic CG3215 - chr2R 23130608 intergenic CG3215 - chr2R 23130688 intergenic CG3215 - chr2R_11_23130001 chr2R_23130001 RAL-908 1060 chr2R 23134826 23134846 chr2R 23134922 23134949 5 102 1.0 7.0 4.0 1.0 123 chr2R 23134826 intergenic not near genes chr2R 23134888 intergenic not near genes chr2R 23134949 intergenic not near genes chr2R_5_23130001 chr2R_23130001 RAL-908 1061 chr2R 23188543 23188586 chr2R 23188641 23188684 11 98 3.0 4.0 3.5 2.4 141 chr2R 23188543 intron CG34371 - chr2R 23188614 intron CG34371 - chr2R 23188684 intron CG34371 - chr2R_11_23185001 chr2R_23185001 RAL-908 1062 chr2R 23190001 23190006 chr2R 23190100 23190106 4 100 7.0 0.5 3.8 0.8 105 chr2R 23190001 intron CG34371 - chr2R 23190054 intron CG34371 - chr2R 23190106 intron CG34371 - chr2R_4_23190001 chr2R_23190001 RAL-908 1063 chr2R 23218989 23219011 chr2R 23219248 23219256 4 254 4.5 0.0 2.2 1.2 267 chr2R 23218989 intergenic not near genes chr2R 23219122 intergenic not near genes chr2R 23219256 intergenic not near genes chr2R_4_23215001 chr2R_23215001 RAL-908 1064 chr2R 23234611 23234624 chr2R 23234736 23234749 6 125 2.0 4.5 3.2 1.4 138 chr2R 23234611 intergenic not near genes chr2R 23234680 intergenic not near genes chr2R 23234749 intergenic not near genes chr2R_6_23230001 chr2R_23230001 RAL-908 1065 chr2R 23234628 23234640 chr2R 23234732 23234765 6 120 2.0 4.5 3.2 1.4 137 chr2R 23234628 intergenic not near genes chr2R 23234696 intergenic not near genes chr2R 23234765 intergenic not near genes chr2R_6_23230001 chr2R_23230001 RAL-908 1066 chr2R 23265904 23265909 chr2R 23266358 23266360 4 460 6.5 0.5 3.5 0.9 456 chr2R 23265904 intergenic CG12782 - chr2R 23266132 intergenic not near genes chr2R 23266360 intergenic not near genes chr2R_4_23265001 chr2R_23265001 RAL-908 1067 chr2R 23330529 23330577 chr2R 23334130 23334173 13 3593 33.0 31.5 32.2 0.4 3644 chr2R 23330529 intergenic CG30413 - chr2R 23332351 intergenic not near genes chr2R 23334173 intergenic not near genes chr2R_13_23330001 chr2R_23330001 RAL-908 1068 chr2R 23402590 23402635 chr2R 23407686 23407731 flea 18 5096 6.0 5.0 5.5 2.8 5141 chr2R 23402590 intergenic CG3520 - chr2R 23405160 intergenic not near genes chr2R 23407731 intergenic not near genes chr2R_18_23405001 chr2R_23405001 RAL-908 1069 chr2R 23421358 23421388 chr2R 23421455 23421497 13 106 3.5 2.0 2.8 3.4 139 chr2R 23421358 intergenic CG9815 - chr2R 23421428 intergenic CG9815 - chr2R 23421497 intergenic CG9815 - chr2R_13_23420001 chr2R_23420001 RAL-908 1070 chr2R 23422628 23422676 chr2R 23422728 23422767 8 99 3.0 2.5 2.8 2.1 139 chr2R 23422628 intron CG9815 - chr2R 23422698 intron CG9815 - chr2R 23422767 intron CG9815 - chr2R_8_23420001 chr2R_23420001 RAL-908 1071 chr2R 23607017 23607192 chr2R 23607116 23607305 14 105 2.0 2.0 2.0 4.7 288 chr2R 23607017 intron CG17664 - chr2R 23607161 intron CG17664 - chr2R 23607305 intron CG17664 - chr2R_14_23605001 chr2R_23605001 RAL-908 1072 chr2R 23614911 23614962 chr2R 23615557 23615586 9 643 2.0 3.0 2.5 2.6 675 chr2R 23614911 intron CG17664 - chr2R 23615248 intron CG17664 - chr2R 23615586 intron CG17664 - chr2R_9_23615001 chr2R_23615001 RAL-908 1073 chr2R 23663589 23663633 chr2R 23663700 23663744 9 111 4.5 3.0 3.8 1.9 155 chr2R 23663589 intron Pde8 + chr2R 23663666 intron Pde8 + chr2R 23663744 intron Pde8 + chr2R_9_23660001 chr2R_23660001 RAL-908 1074 chr2R 23739165 23739216 chr2R 23739263 23739314 19 95 3.5 6.5 5.0 3.2 149 chr2R 23739165 intron egl - chr2R 23739240 intron egl - chr2R 23739314 intron egl - chr2R_19_23735001 chr2R_23735001 RAL-908 1075 chr2R 23747046 23747093 chr2R 23747614 23747635 5 563 2.0 1.5 1.8 1.8 589 chr2R 23747046 intergenic egl - chr2R 23747340 intergenic CG13560 + chr2R 23747635 exon CG13560 + chr2R_5_23745001 chr2R_23745001 RAL-908 1076 chr2R 23784451 23784496 chr2R 23784549 23784594 20 97 4.0 4.0 4.0 4.0 143 chr2R 23784451 intron CG9850 - chr2R 23784522 intron CG9850 - chr2R 23784594 intron CG9850 - chr2R_20_23780001 chr2R_23780001 RAL-908 1077 chr2R 23865808 23865851 chr2R 23865910 23865926 9 99 3.0 4.5 3.8 1.9 118 chr2R 23865808 intron CG5569 + chr2R 23865867 intron CG5569 + chr2R 23865926 intron CG5569 + chr2R_9_23865001 chr2R_23865001 RAL-908 1078 chr2R 23914282 23914332 chr2R 23921926 23921950 412 7 7631 2.5 6.0 4.2 1.3 7668 chr2R 23914282 exon kcc + chr2R 23918116 intron kcc + chr2R 23921950 intron kcc + chr2R_7_23915001 chr2R_23915001 RAL-908 1079 chr2R 23986496 23986549 chr2R 23986596 23986649 17 100 2.0 6.5 4.2 3.3 153 chr2R 23986496 intron Phm - chr2R 23986572 intron Phm - chr2R 23986649 intron,5` UTR Phm -,CG30178 + chr2R_17_23985001 chr2R_23985001 RAL-908 1080 chr2R 24031362 24031414 chr2R 24031466 24031518 22 103 3.5 5.0 4.2 4.2 156 chr2R 24031362 5` UTR CG30172 - chr2R 24031440 intergenic CG30172 -,Chi - chr2R 24031518 intergenic Chi -,CG30172 - chr2R_22_24030001 chr2R_24030001 RAL-908 1081 chr2R 24147069 24147086 chr2R 24154644 24154684 412 4 7588 1.0 2.0 1.5 1.6 7615 chr2R 24147069 intron Dat + chr2R 24150876 intron Dat + chr2R 24154684 intron Dat + chr2R_4_24150001 chr2R_24150001 RAL-908 1082 chr2R 24177222 24177259 chr2R 24184726 24184764 412 20 7505 9.0 5.0 7.0 2.5 7542 chr2R 24177222 3` UTR Nop60B + chr2R 24180993 intron Nop60B + chr2R 24184764 3` UTR Nop60B + chr2R_20_24180001 chr2R_24180001 RAL-908 1083 chr2R 24278308 24278356 chr2R 24278412 24278454 7 101 0.5 3.5 2.0 2.3 146 chr2R 24278308 intron nvy + chr2R 24278381 intron nvy + chr2R 24278454 intron nvy + chr2R_7_24275001 chr2R_24275001 RAL-908 1084 chr2R 24303871 24303908 chr2R 24303975 24304012 5 104 4.5 0.0 2.2 1.6 141 chr2R 24303871 intergenic not near genes chr2R 24303942 intergenic not near genes chr2R 24304012 intergenic not near genes chr2R_5_24300001 chr2R_24300001 RAL-908 1085 chr2R 24313366 24313399 chr2R 24313468 24313502 13 102 4.5 6.5 5.5 2.0 136 chr2R 24313366 intergenic betaTub60D + chr2R 24313434 intergenic betaTub60D + chr2R 24313502 intergenic betaTub60D + chr2R_13_24310001 chr2R_24310001 RAL-908 1086 chr2R 24336152 24336193 chr2R 24336259 24336300 9 107 2.0 2.5 2.2 2.8 148 chr2R 24336152 intergenic CR44282 - chr2R 24336226 intergenic CR44282 - chr2R 24336300 intergenic CR44282 - chr2R_9_24335001 chr2R_24335001 RAL-908 1087 chr2R 24353410 24353448 chr2R 24361792 24361829 roo 9 8381 7.0 2.0 4.5 1.6 8419 chr2R 24353410 intron,intron bs +,CR44811 - chr2R 24357620 intron,intron bs +,CR44811 - chr2R 24361829 intron,intron bs +,CR44811 - chr2R_9_24355001 chr2R_24355001 RAL-908 1088 chr2R 24383815 24383854 chr2R 24383915 24383955 7 101 3.5 2.0 2.8 1.8 140 chr2R 24383815 intron mAChR-A - chr2R 24383885 intron mAChR-A - chr2R 24383955 exon mAChR-A - chr2R_7_24380001 chr2R_24380001 RAL-908 1089 chr2R 24437158 24437202 chr2R 24437267 24437311 14 107 2.0 6.0 4.0 2.8 153 chr2R 24437158 intergenic not near genes chr2R 24437234 intergenic not near genes chr2R 24437311 intergenic not near genes chr2R_14_24435001 chr2R_24435001 RAL-908 1090 chr2R 24493068 24493088 chr2R 24493177 24493197 5 108 3.0 2.5 2.8 1.3 129 chr2R 24493068 intergenic CG13590 -,CG13589 - chr2R 24493132 intergenic CG13590 -,CG13589 - chr2R 24493197 intergenic CG13590 -,CG13589 - chr2R_5_24490001 chr2R_24490001 RAL-908 1091 chr2R 24542580 24542626 chr2R 24542696 24542742 16 116 3.0 4.0 3.5 3.6 162 chr2R 24542580 intron,intron CG4622 -,ITP + chr2R 24542661 intron,intron CG4622 -,ITP + chr2R 24542742 intron,intron CG4622 -,ITP + chr2R_16_24540001 chr2R_24540001 RAL-908 1092 chr2R 24647574 24647617 chr2R 24655151 24655194 412 11 7576 5.0 7.5 6.2 1.5 7620 chr2R 24647574 intergenic not near genes chr2R 24651384 intergenic not near genes chr2R 24655194 intergenic not near genes chr2R_11_24650001 chr2R_24650001 RAL-908 1093 chr2R 24727867 24727918 chr2R 24735395 24735410 mdg1 10 7523 2.0 2.5 2.2 3.1 7543 chr2R 24727867 intron Mid1 - chr2R 24731638 intron Mid1 - chr2R 24735410 intron Mid1 - chr2R_10_24730001 chr2R_24730001 RAL-908 1094 chr2R 24763590 24763634 chr2R 24765586 24765630 G2 5 1995 3.5 1.0 2.2 1.6 2040 chr2R 24763590 exon CG3894 + chr2R 24764610 intron CG3894 + chr2R 24765630 exon CG3894 + chr2R_5_24760001 chr2R_24760001 RAL-908 1095 chr2R 24859825 24859868 chr2R 24859928 24859974 8 106 1.5 3.0 2.2 2.5 149 chr2R 24859825 5` UTR CR44829 + chr2R 24859900 5` UTR CR44829 + chr2R 24859974 5` UTR CR44829 + chr2R_8_24855001 chr2R_24855001 RAL-908 1096 chr2R 24884033 24884072 chr2R 24884135 24884174 18 102 5.5 4.0 4.8 3.1 141 chr2R 24884033 intron NKAIN + chr2R 24884104 intron NKAIN + chr2R 24884174 intron NKAIN + chr2R_18_24880001 chr2R_24880001 RAL-908 1097 chr2R 25004872 25004919 chr2R 25004970 25005017 14 97 5.5 5.0 5.2 2.3 145 chr2R 25004872 intron zip - chr2R 25004944 intron zip - chr2R 25005017 intron zip - chr2R_14_25000001 chr2R_25000001 RAL-908 1098 chr2R 25014524 25014575 chr2R 25014619 25014671 9 90 4.0 5.0 4.5 1.6 147 chr2R 25014524 intron uzip + chr2R 25014598 intron uzip + chr2R 25014671 intron uzip + chr2R_9_25010001 chr2R_25010001 RAL-908 1099 chr2R 25018321 25018344 chr2R 25018442 25018465 9 121 7.0 3.0 5.0 1.5 144 chr2R 25018321 intron uzip + chr2R 25018393 intron uzip + chr2R 25018465 intron uzip + chr2R_9_25015001 chr2R_25015001 RAL-908 1100 chr2R 25018348 25018374 chr2R 25018439 25018483 7 111 3.0 2.5 2.8 1.8 135 chr2R 25018348 intron uzip + chr2R 25018416 intron uzip + chr2R 25018483 intron uzip + chr2R_7_25015001 chr2R_25015001 RAL-908 1101 chr2R 25022621 25022670 chr2R 25022725 25022774 12 104 7.5 2.0 4.8 2.1 153 chr2R 25022621 intron uzip + chr2R 25022698 intron uzip + chr2R 25022774 intron uzip + chr2R_12_25020001 chr2R_25020001 RAL-908 1102 chr2R 25101254 25101306 chr2R 25101376 25101428 11 120 2.0 2.5 2.2 3.4 174 chr2R 25101254 intron lov - chr2R 25101341 intron lov - chr2R 25101428 intron lov - chr2R_11_25100001 chr2R_25100001 RAL-908 1103 chr2R 25122954 25122992 chr2R 25123053 25123091 14 99 3.5 5.0 4.2 2.7 137 chr2R 25122954 intron lov - chr2R 25123022 intron lov - chr2R 25123091 intron lov - chr2R_14_25120001 chr2R_25120001 RAL-908 1104 chr2R 25141634 25141639 chr2R 25159344 25159349 roo 4 17710 8.5 7.5 8.0 0.4 17715 chr2R 25141634 intergenic not near genes chr2R 25150492 intergenic not near genes chr2R 25159349 intergenic not near genes chr2R_4_25150001 chr2R_25150001 RAL-908 1105 chr2R 25141641 25141682 chr2R 25159342 25159392 roo 18 17709 5.0 6.5 5.8 2.6 17751 chr2R 25141641 intergenic not near genes chr2R 25150516 intergenic not near genes chr2R 25159392 intergenic not near genes chr2R_18_25150001 chr2R_25150001 RAL-908 1106 chr2R 25180748 25180793 chr2R 25180845 25180890 16 96 4.0 3.0 3.5 3.6 142 chr2R 25180748 intergenic not near genes chr2R 25180819 intergenic not near genes chr2R 25180890 intergenic not near genes chr2R_16_25180001 chr2R_25180001 RAL-908 1107 chr2R 25181103 25181115 chr2R 25181220 25181232 4 117 5.5 4.5 5.0 0.7 129 chr2R 25181103 intergenic not near genes chr2R 25181168 intergenic not near genes chr2R 25181232 intergenic not near genes chr2R_4_25180001 chr2R_25180001 RAL-908 1108 chr2R 25236012 25236045 chr2R 25236142 25236176 12 131 4.0 5.5 4.8 2.1 164 chr2R 25236012 intron CG9380 - chr2R 25236094 intron CG9380 - chr2R 25236176 intron CG9380 - chr2R_12_25235001 chr2R_25235001 RAL-908 1109 chr2R 25253437 25253456 chr2R 25253533 25253552 5 95 5.5 6.0 5.8 0.7 115 chr2R 25253437 intron,intron CG9380 -,CG30428 + chr2R 25253494 intron,intron CG9380 -,CG30428 + chr2R 25253552 intron,intron CG9380 -,CG30428 + chr2R_5_25250001 chr2R_25250001 RAL-908 1110 chr3L 72695 72735 chr3L 73650 73690 8 955 4.5 3.0 3.8 1.7 995 chr3L 72695 intron CR43988 - chr3L 73192 intergenic CR43988 - chr3L 73690 intergenic CG13405 - chr3L_8_70001 chr3L_70001 RAL-908 1111 chr3L 86460 86486 chr3L 86546 86585 10 94 1.5 5.5 3.5 2.2 125 chr3L 86460 intergenic not near genes chr3L 86522 intergenic not near genes chr3L 86585 intergenic not near genes chr3L_10_85001 chr3L_85001 RAL-908 1112 chr3L 87039 87087 chr3L 87341 87389 15 300 3.5 5.5 4.5 2.7 350 chr3L 87039 intergenic not near genes chr3L 87214 intergenic not near genes chr3L 87389 intergenic not near genes chr3L_15_85001 chr3L_85001 RAL-908 1113 chr3L 105724 105740 chr3L 105839 105855 5 114 8.5 4.0 6.2 0.7 131 chr3L 105724 intergenic not near genes chr3L 105790 intergenic not near genes chr3L 105855 intergenic not near genes chr3L_5_105001 chr3L_105001 RAL-908 1114 chr3L 105744 105775 chr3L 105837 105890 7 109 3.0 3.5 3.2 1.7 146 chr3L 105744 intergenic not near genes chr3L 105817 intergenic not near genes chr3L 105890 intergenic not near genes chr3L_7_105001 chr3L_105001 RAL-908 1115 chr3L 108939 108983 chr3L 109034 109067 9 97 4.5 1.5 3.0 2.2 128 chr3L 108939 intergenic not near genes chr3L 109003 intergenic not near genes chr3L 109067 intergenic not near genes chr3L_9_105001 chr3L_105001 RAL-908 1116 chr3L 110203 110241 chr3L 119390 119420 roo 12 9186 6.5 6.5 6.5 1.6 9217 chr3L 110203 intergenic not near genes chr3L 114812 intergenic not near genes chr3L 119420 intergenic not near genes chr3L_12_110001 chr3L_110001 RAL-908 1117 chr3L 320995 321027 chr3L 321078 321113 11 87 3.5 7.0 5.2 1.8 118 chr3L 320995 intergenic CG32344 - chr3L 321054 intergenic CG32344 - chr3L 321113 intergenic CG32344 - chr3L_11_320001 chr3L_320001 RAL-908 1118 chr3L 365505 365554 chr3L 365611 365660 15 105 4.0 2.5 3.2 3.6 155 chr3L 365505 3` UTR CG1233 + chr3L 365582 3` UTR CG1233 + chr3L 365660 3` UTR CG1233 + chr3L_15_365001 chr3L_365001 RAL-908 1119 chr3L 375240 375279 chr3L 375344 375383 6 100 0.0 3.5 1.8 2.1 143 chr3L 375240 intron trh - chr3L 375312 intron trh - chr3L 375383 intron trh - chr3L_6_375001 chr3L_375001 RAL-908 1120 chr3L 390938 390984 chr3L 391064 391110 14 124 2.0 4.5 3.2 3.3 172 chr3L 390938 intron trh - chr3L 391024 intron trh - chr3L 391110 intron trh - chr3L_14_390001 chr3L_390001 RAL-908 1121 chr3L 400479 400499 chr3L 400578 400607 7 104 1.0 4.5 2.8 1.8 128 chr3L 400479 intergenic not near genes chr3L 400543 intergenic not near genes chr3L 400607 intergenic not near genes chr3L_7_400001 chr3L_400001 RAL-908 1122 chr3L 402670 402697 chr3L 409743 409770 297 8 7073 4.0 3.5 3.8 1.7 7100 chr3L 402670 intergenic not near genes chr3L 406220 intergenic not near genes chr3L 409770 intergenic not near genes chr3L_8_405001 chr3L_405001 RAL-908 1123 chr3L 449207 449239 chr3L 449540 449579 7 329 2.5 2.5 2.5 2.0 372 chr3L 449207 intron klar - chr3L 449393 intron klar - chr3L 449579 intron klar - chr3L_7_445001 chr3L_445001 RAL-908 1124 chr3L 592951 592969 chr3L 593047 593065 11 96 6.5 7.0 6.8 1.4 114 chr3L 592951 intergenic MED14 + chr3L 593008 intergenic MED14 + chr3L 593065 intergenic MED14 + chr3L_11_590001 chr3L_590001 RAL-908 1125 chr3L 606886 606911 chr3L 606975 607010 5 97 0.0 0.0 0.0 5.0 124 chr3L 606886 intergenic Reg-2 - chr3L 606948 intergenic Reg-2 - chr3L 607010 intergenic Reg-2 - chr3L_5_605001 chr3L_605001 RAL-908 1126 chr3L 705863 705931 chr3L 705992 706047 8 124 0.0 2.5 1.2 3.6 184 chr3L 705863 intergenic CG13895 -,CR44514 + chr3L 705955 3` UTR CG13895 - chr3L 706047 3` UTR CG13895 - chr3L_8_705001 chr3L_705001 RAL-908 1127 chr3L 748196 748243 chr3L 748295 748342 14 99 3.0 7.0 5.0 2.3 146 chr3L 748196 intron hng3 - chr3L 748269 intron hng3 - chr3L 748342 intron hng3 - chr3L_14_745001 chr3L_745001 RAL-908 1128 chr3L 789896 789905 chr3L 790401 790410 roo 4 505 2.5 0.0 1.2 1.8 514 chr3L 789896 intergenic not near genes chr3L 790153 intergenic not near genes chr3L 790410 intergenic not near genes chr3L_4_790001 chr3L_790001 RAL-908 1129 chr3L 802566 802566 chr3L 11777678 11777678 4 10975112 7.5 6.5 7.0 0.5 10975112 chr3L 802566 intergenic not near genes chr3L 6290122 intergenic not near genes chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_4_6290001 chr3L_6290001 RAL-908 1130 chr3L 822075 822091 chr3L 822175 822184 6 99 0.0 3.0 1.5 2.4 109 chr3L 822075 intergenic not near genes chr3L 822130 intergenic not near genes chr3L 822184 intergenic not near genes chr3L_6_820001 chr3L_820001 RAL-908 1131 chr3L 824124 824164 chr3L 824221 824256 5 94 3.5 3.0 3.2 1.2 132 chr3L 824124 intergenic not near genes chr3L 824190 intergenic not near genes chr3L 824256 intergenic not near genes chr3L_5_820001 chr3L_820001 RAL-908 1132 chr3L 899995 900003 chr3L 900099 900107 5 104 0.0 9.0 4.5 0.9 112 chr3L 899995 intergenic not near genes chr3L 900051 intergenic not near genes chr3L 900107 intergenic not near genes chr3L_5_900001 chr3L_900001 RAL-908 1133 chr3L 925159 925208 chr3L 932605 932634 mdg1 13 7444 3.0 6.5 4.8 2.2 7475 chr3L 925159 intron Glut1 + chr3L 928896 intron Glut1 + chr3L 932634 intron Glut1 + chr3L_13_925001 chr3L_925001 RAL-908 1134 chr3L 933889 933944 chr3L 934013 934067 16 123 0.5 2.5 1.5 6.4 178 chr3L 933889 intron Glut1 + chr3L 933978 intron Glut1 + chr3L 934067 intron Glut1 + chr3L_16_930001 chr3L_930001 RAL-908 1135 chr3L 939759 939790 chr3L 940900 940925 jockey 10 1140 4.0 4.0 4.0 2.0 1166 chr3L 939759 intron Glut1 + chr3L 940342 intron Glut1 + chr3L 940925 intron Glut1 + chr3L_10_940001 chr3L_940001 RAL-908 1136 chr3L 947608 947637 chr3L 947812 947841 11 204 7.5 8.5 8.0 1.2 233 chr3L 947608 intron Glut1 + chr3L 947724 intron Glut1 + chr3L 947841 intron Glut1 + chr3L_11_945001 chr3L_945001 RAL-908 1137 chr3L 949871 949920 chr3L 949976 949980 13 96 2.0 3.0 2.5 3.7 109 chr3L 949871 intron Glut1 + chr3L 949926 intron Glut1 + chr3L 949980 intron Glut1 + chr3L_13_945001 chr3L_945001 RAL-908 1138 chr3L 960411 960459 chr3L 960534 960582 15 122 2.5 3.5 3.0 3.8 171 chr3L 960411 intron Glut1 + chr3L 960496 intron Glut1 + chr3L 960582 intron Glut1 + chr3L_15_960001 chr3L_960001 RAL-908 1139 chr3L 1003039 1003080 chr3L 1003136 1003177 14 96 1.0 5.0 3.0 3.5 138 chr3L 1003039 intron trio - chr3L 1003108 intron trio - chr3L 1003177 intron trio - chr3L_14_1000001 chr3L_1000001 RAL-908 1140 chr3L 1021576 1021626 chr3L 1021672 1021722 16 83 5.0 4.0 4.5 2.9 146 chr3L 1021576 intron trio - chr3L 1021649 intron trio - chr3L 1021722 intron trio - chr3L_16_1020001 chr3L_1020001 RAL-908 1141 chr3L 1047339 1047380 chr3L 1055162 1055201 412 6 7823 3.5 0.5 2.0 2.0 7862 chr3L 1047339 intron bab1 - chr3L 1051270 intron bab1 - chr3L 1055201 intron bab1 - chr3L_6_1050001 chr3L_1050001 RAL-908 1142 chr3L 1095033 1095051 chr3L 1095101 1095144 7 88 2.5 2.0 2.2 2.2 111 chr3L 1095033 intron bab1 - chr3L 1095088 intron bab1 - chr3L 1095144 intron bab1 - chr3L_7_1095001 chr3L_1095001 RAL-908 1143 chr3L 1109612 1109666 chr3L 1109720 1109774 12 107 3.5 2.5 3.0 3.0 162 chr3L 1109612 intergenic not near genes chr3L 1109693 intergenic not near genes chr3L 1109774 intergenic not near genes chr3L_12_1105001 chr3L_1105001 RAL-908 1144 chr3L 1145227 1145256 chr3L 1145319 1145355 4 97 1.0 0.0 0.5 2.7 128 chr3L 1145227 intron bab2 - chr3L 1145291 intron bab2 - chr3L 1145355 intron bab2 - chr3L_4_1145001 chr3L_1145001 RAL-908 1145 chr3L 1154117 1154162 chr3L 1163287 1163332 roo 13 9170 2.5 4.0 3.2 3.1 9215 chr3L 1154117 intron bab2 - chr3L 1158724 intron bab2 - chr3L 1163332 intron bab2 - chr3L_13_1155001 chr3L_1155001 RAL-908 1146 chr3L 1195350 1195399 chr3L 1195574 1195623 5 224 0.0 0.0 0.0 5.0 273 chr3L 1195350 intergenic LysX - chr3L 1195486 intergenic LysX - chr3L 1195623 intergenic LysX - chr3L_5_1195001 chr3L_1195001 RAL-908 1147 chr3L 1219583 1219612 chr3L 1227336 1227365 412 4 7752 1.5 4.0 2.8 1.1 7782 chr3L 1219583 intron mwh + chr3L 1223474 intron mwh + chr3L 1227365 intron mwh + chr3L_4_1220001 chr3L_1220001 RAL-908 1148 chr3L 1347140 1347185 chr3L 1347245 1347257 10 98 2.5 3.5 3.0 2.5 117 chr3L 1347140 intron Ptp61F - chr3L 1347198 intron Ptp61F - chr3L 1347257 intron Ptp61F - chr3L_10_1345001 chr3L_1345001 RAL-908 1149 chr3L 1358253 1358296 chr3L 1358740 1358783 8 484 2.0 4.0 3.0 2.0 530 chr3L 1358253 intron Ptp61F - chr3L 1358518 intron Ptp61F - chr3L 1358783 intron Ptp61F - chr3L_8_1355001 chr3L_1355001 RAL-908 1150 chr3L 1372365 1372394 chr3L 1372462 1372491 8 97 3.0 3.5 3.2 1.9 126 chr3L 1372365 intron,intron Ptp61F -,ru + chr3L 1372428 intron,intron Ptp61F -,ru + chr3L 1372491 intron,intron Ptp61F -,ru + chr3L_8_1370001 chr3L_1370001 RAL-908 1151 chr3L 1415777 1415804 chr3L 1415867 1415900 7 91 2.0 1.5 1.8 2.5 123 chr3L 1415777 intron Ptp61F - chr3L 1415838 intron Ptp61F - chr3L 1415900 intron Ptp61F - chr3L_7_1415001 chr3L_1415001 RAL-908 1152 chr3L 1424754 1424759 chr3L 1430022 1430028 Rt1a 4 5269 0.5 1.0 0.8 2.2 5274 chr3L 1424754 intron Ptp61F - chr3L 1427391 intron Ptp61F - chr3L 1430028 intron Ptp61F - chr3L_4_1425001 chr3L_1425001 RAL-908 1153 chr3L 1424761 1424766 chr3L 1430015 1430032 Rt1a 4 5260 0.5 1.0 0.8 2.2 5271 chr3L 1424761 intron Ptp61F - chr3L 1427396 intron Ptp61F - chr3L 1430032 intron Ptp61F - chr3L_4_1425001 chr3L_1425001 RAL-908 1154 chr3L 1505975 1506029 chr3L 1513592 1513646 17.6 10 7617 3.0 1.0 2.0 3.3 7671 chr3L 1505975 intron,intron Psa +,cue - chr3L 1509810 intron,intron Psa +,cue - chr3L 1513646 intron,intron Psa +,cue - chr3L_10_1505001 chr3L_1505001 RAL-908 1155 chr3L 1514041 1514086 chr3L 1514144 1514174 7 101 2.0 3.5 2.8 1.8 133 chr3L 1514041 intron,intron Psa +,cue - chr3L 1514108 intron,intron Psa +,cue - chr3L 1514174 intron,intron Psa +,cue - chr3L_7_1510001 chr3L_1510001 RAL-908 1156 chr3L 1515869 1515923 chr3L 1515996 1516047 5 130 0.0 5.0 2.5 1.4 178 chr3L 1515869 intron,intron Psa +,cue - chr3L 1515958 intron,intron Psa +,cue - chr3L 1516047 intron,intron Psa +,cue - chr3L_5_1515001 chr3L_1515001 RAL-908 1157 chr3L 1528215 1528261 chr3L 1528311 1528348 11 88 3.0 6.5 4.8 1.9 133 chr3L 1528215 intron CG12090 - chr3L 1528282 intron CG12090 - chr3L 1528348 intron CG12090 - chr3L_11_1525001 chr3L_1525001 RAL-908 1158 chr3L 1740841 1740887 chr3L 1741106 1741150 pogo 13 262 2.0 5.5 3.8 2.7 309 chr3L 1740841 intron Gk + chr3L 1740996 intron Gk + chr3L 1741150 intron Gk + chr3L_13_1740001 chr3L_1740001 RAL-908 1159 chr3L 1805683 1805702 chr3L 1805877 1805896 6 194 2.5 2.5 2.5 1.7 213 chr3L 1805683 exon CG42676 + chr3L 1805790 intron CG42676 + chr3L 1805896 intron CG42676 + chr3L_6_1805001 chr3L_1805001 RAL-908 1160 chr3L 1882347 1882376 chr3L 1882461 1882491 7 113 4.5 0.0 2.2 2.2 144 chr3L 1882347 intron CG13937 - chr3L 1882419 intron CG13937 - chr3L 1882491 intron CG13937 - chr3L_7_1880001 chr3L_1880001 RAL-908 1161 chr3L 1924956 1924972 chr3L 1925110 1925130 7 157 2.0 2.5 2.2 2.2 174 chr3L 1924956 exon Dbx + chr3L 1925043 intron Dbx + chr3L 1925130 intron Dbx + chr3L_7_1925001 chr3L_1925001 RAL-908 1162 chr3L 2039353 2039397 chr3L 2039464 2039508 5 111 2.5 1.5 2.0 1.7 155 chr3L 2039353 intergenic sls - chr3L 2039430 intergenic sls - chr3L 2039508 intergenic sls - chr3L_5_2035001 chr3L_2035001 RAL-908 1163 chr3L 2107065 2107113 chr3L 2107206 2107238 6 133 0.0 3.0 1.5 2.4 173 chr3L 2107065 intron sls - chr3L 2107152 intron sls - chr3L 2107238 intron sls - chr3L_6_2105001 chr3L_2105001 RAL-908 1164 chr3L 2108235 2108281 chr3L 2113459 2113505 copia 18 5224 5.5 6.0 5.8 2.6 5270 chr3L 2108235 intron sls - chr3L 2110870 intron sls - chr3L 2113505 intron sls - chr3L_18_2110001 chr3L_2110001 RAL-908 1165 chr3L 2139186 2139226 chr3L 2139287 2139327 7 100 5.0 4.0 4.5 1.3 141 chr3L 2139186 intron zormin - chr3L 2139256 intron zormin - chr3L 2139327 intron zormin - chr3L_7_2135001 chr3L_2135001 RAL-908 1166 chr3L 2199798 2199815 chr3L 2199891 2199911 8 96 0.0 3.5 1.8 2.9 113 chr3L 2199798 intergenic not near genes chr3L 2199854 intergenic not near genes chr3L 2199911 intergenic not near genes chr3L_8_2195001 chr3L_2195001 RAL-908 1167 chr3L 2218463 2218506 chr3L 2218558 2218602 10 88 4.0 4.5 4.2 1.9 139 chr3L 2218463 intergenic not near genes chr3L 2218532 intergenic not near genes chr3L 2218602 intergenic not near genes chr3L_10_2215001 chr3L_2215001 RAL-908 1168 chr3L 2282973 2283023 chr3L 2283069 2283119 10 96 3.5 4.5 4.0 2.0 146 chr3L 2282973 5` UTR MsR2 + chr3L 2283046 5` UTR MsR2 + chr3L 2283119 5` UTR MsR2 + chr3L_10_2280001 chr3L_2280001 RAL-908 1169 chr3L 2307982 2308031 chr3L 2308108 2308156 15 124 3.0 1.5 2.2 4.7 174 chr3L 2307982 intergenic not near genes chr3L 2308069 intergenic not near genes chr3L 2308156 intergenic not near genes chr3L_15_2305001 chr3L_2305001 RAL-908 1170 chr3L 2310480 2310525 chr3L 2310632 2310680 12 153 1.0 2.5 1.8 4.3 200 chr3L 2310480 intergenic not near genes chr3L 2310580 intergenic not near genes chr3L 2310680 intergenic not near genes chr3L_12_2310001 chr3L_2310001 RAL-908 1171 chr3L 2331567 2331576 chr3L 2331664 2331673 5 97 6.0 3.5 4.8 0.9 106 chr3L 2331567 intron MsR1 + chr3L 2331620 intron MsR1 + chr3L 2331673 intron MsR1 + chr3L_5_2330001 chr3L_2330001 RAL-908 1172 chr3L 2331579 2331615 chr3L 2331661 2331711 10 94 3.0 3.0 3.0 2.5 132 chr3L 2331579 intron MsR1 + chr3L 2331645 intron MsR1 + chr3L 2331711 intron MsR1 + chr3L_10_2330001 chr3L_2330001 RAL-908 1173 chr3L 2411334 2411344 chr3L 2411425 2411442 6 96 1.0 2.5 1.8 2.1 108 chr3L 2411334 intron CG45186 + chr3L 2411388 intron CG45186 + chr3L 2411442 intron CG45186 + chr3L_6_2410001 chr3L_2410001 RAL-908 1174 chr3L 2447488 2447528 chr3L 2456664 2456685 roo 6 9167 7.5 2.5 5.0 1.0 9197 chr3L 2447488 intron CG45186 + chr3L 2452086 intron CG45186 + chr3L 2456685 intron CG45186 + chr3L_6_2450001 chr3L_2450001 RAL-908 1175 chr3L 2493802 2493846 chr3L 2493900 2493954 10 98 6.5 0.0 3.2 2.4 152 chr3L 2493802 intron CG45186 + chr3L 2493878 intron CG45186 + chr3L 2493954 intron CG45186 + chr3L_10_2490001 chr3L_2490001 RAL-908 1176 chr3L 2533643 2533682 chr3L 2533731 2533759 4 88 4.0 4.0 4.0 0.8 116 chr3L 2533643 intron Spn - chr3L 2533701 intron Spn - chr3L 2533759 intron Spn - chr3L_4_2530001 chr3L_2530001 RAL-908 1177 chr3L 2609659 2609680 chr3L 2609755 2609776 6 96 1.5 0.0 0.8 3.3 117 chr3L 2609659 intron Pxn - chr3L 2609718 intron Pxn - chr3L 2609776 intron Pxn - chr3L_6_2605001 chr3L_2605001 RAL-908 1178 chr3L 2631043 2631093 chr3L 2631173 2631220 7 128 3.0 4.0 3.5 1.6 177 chr3L 2631043 intergenic CR45660 - chr3L 2631132 intergenic CR45660 - chr3L 2631220 intergenic CG42245 +,MEP-1 + chr3L_7_2630001 chr3L_2630001 RAL-908 1179 chr3L 2667880 2667926 chr3L 2667975 2668022 7 92 3.5 3.0 3.2 1.7 142 chr3L 2667880 intron Fife - chr3L 2667951 intron Fife - chr3L 2668022 intron Fife - chr3L_7_2665001 chr3L_2665001 RAL-908 1180 chr3L 2683924 2683976 chr3L 2684017 2684067 15 94 6.0 6.0 6.0 2.1 143 chr3L 2683924 intron Fife - chr3L 2683996 intron Fife - chr3L 2684067 intron Fife - chr3L_15_2680001 chr3L_2680001 RAL-908 1181 chr3L 2710996 2711034 chr3L 2711113 2711151 10 117 5.0 3.5 4.2 1.9 155 chr3L 2710996 intron Fife - chr3L 2711074 intron Fife - chr3L 2711151 intron Fife - chr3L_10_2710001 chr3L_2710001 RAL-908 1182 chr3L 2719519 2719560 chr3L 2719641 2719682 12 120 4.0 2.5 3.2 2.9 163 chr3L 2719519 3` UTR Mrtf - chr3L 2719600 3` UTR Mrtf - chr3L 2719682 3` UTR Mrtf - chr3L_12_2715001 chr3L_2715001 RAL-908 1183 chr3L 2731496 2731549 chr3L 2731598 2731651 10 98 3.0 2.5 2.8 2.6 155 chr3L 2731496 intron Mrtf - chr3L 2731574 intron Mrtf - chr3L 2731651 intron Mrtf - chr3L_10_2730001 chr3L_2730001 RAL-908 1184 chr3L 2751440 2751457 chr3L 2755755 2755772 F-element 5 4315 13.5 3.5 8.5 0.5 4332 chr3L 2751440 intron Mrtf - chr3L 2753606 intron Mrtf - chr3L 2755772 intron Mrtf - chr3L_5_2750001 chr3L_2750001 RAL-908 1185 chr3L 2766717 2766762 chr3L 2766834 2766879 10 113 1.5 4.5 3.0 2.5 162 chr3L 2766717 intergenic Mrtf -,Non2 + chr3L 2766798 intergenic Non2 +,Mrtf - chr3L 2766879 intergenic Non2 +,Mrtf - chr3L_10_2765001 chr3L_2765001 RAL-908 1186 chr3L 2882096 2882143 chr3L 2882192 2882239 14 96 4.5 4.5 4.5 2.5 143 chr3L 2882096 intergenic not near genes chr3L 2882168 intergenic not near genes chr3L 2882239 intergenic not near genes chr3L_14_2880001 chr3L_2880001 RAL-908 1187 chr3L 2895863 2895889 chr3L 2895967 2895993 5 100 3.0 2.0 2.5 1.4 130 chr3L 2895863 intron Shab + chr3L 2895928 intron Shab + chr3L 2895993 intron Shab + chr3L_5_2895001 chr3L_2895001 RAL-908 1188 chr3L 2927820 2927869 chr3L 2936117 2936166 Tirant 13 8293 4.0 6.5 5.2 2.1 8346 chr3L 2927820 intron Shab + chr3L 2931993 intron Shab + chr3L 2936166 intron Shab + chr3L_13_2930001 chr3L_2930001 RAL-908 1189 chr3L 2966702 2966723 chr3L 2974149 2974170 mdg1 5 7447 6.0 2.5 4.2 1.0 7468 chr3L 2966702 intergenic not near genes chr3L 2970436 intergenic not near genes chr3L 2974170 intergenic not near genes chr3L_5_2970001 chr3L_2970001 RAL-908 1190 chr3L 2987724 2987748 chr3L 2988006 2988030 5 281 5.5 3.5 4.5 0.9 306 chr3L 2987724 intergenic not near genes chr3L 2987877 intergenic not near genes chr3L 2988030 intergenic not near genes chr3L_5_2985001 chr3L_2985001 RAL-908 1191 chr3L 3027598 3027622 chr3L 3028619 3028643 8 1019 3.0 4.0 3.5 1.8 1045 chr3L 3027598 intergenic not near genes chr3L 3028120 intergenic not near genes chr3L 3028643 intergenic not near genes chr3L_8_3025001 chr3L_3025001 RAL-908 1192 chr3L 3028987 3029022 chr3L 3029093 3029127 7 105 4.5 0.0 2.2 2.2 140 chr3L 3028987 intergenic not near genes chr3L 3029057 intergenic not near genes chr3L 3029127 intergenic not near genes chr3L_7_3025001 chr3L_3025001 RAL-908 1193 chr3L 3040306 3040335 chr3L 3042115 3042125 S-element 10 1805 8.5 0.5 4.5 1.8 1819 chr3L 3040306 3` UTR CG2162 + chr3L 3041216 intergenic not near genes chr3L 3042125 intergenic Jafrac2 + chr3L_10_3040001 chr3L_3040001 RAL-908 1194 chr3L 3104846 3104873 chr3L 3104948 3104975 4 102 3.0 1.5 2.2 1.2 129 chr3L 3104846 intron Cht7 - chr3L 3104910 intron Cht7 - chr3L 3104975 intron Cht7 - chr3L_4_3100001 chr3L_3100001 RAL-908 1195 chr3L 3259795 3259828 chr3L 3259915 3259948 14 119 3.0 2.5 2.8 3.7 153 chr3L 3259795 intron ckd + chr3L 3259872 intron ckd + chr3L 3259948 intron ckd + chr3L_14_3255001 chr3L_3255001 RAL-908 1196 chr3L 3263794 3263806 chr3L 3263888 3263905 5 97 0.0 7.5 3.8 1.0 111 chr3L 3263794 intron ckd + chr3L 3263850 intron ckd + chr3L 3263905 intron ckd + chr3L_5_3260001 chr3L_3260001 RAL-908 1197 chr3L 3269063 3269091 chr3L 3269196 3269224 15 133 1.5 3.0 2.2 4.7 161 chr3L 3269063 intergenic CG34265 + chr3L 3269144 intergenic CG34265 + chr3L 3269224 intergenic CG34265 + chr3L_15_3265001 chr3L_3265001 RAL-908 1198 chr3L 3306041 3306077 chr3L 3306413 3306449 12 370 3.5 3.0 3.2 2.9 408 chr3L 3306041 intron ZnT63C + chr3L 3306245 intron ZnT63C + chr3L 3306449 intron ZnT63C + chr3L_12_3305001 chr3L_3305001 RAL-908 1199 chr3L 3317512 3317565 chr3L 3317611 3317664 17 96 0.5 3.0 1.8 6.1 152 chr3L 3317512 intergenic Drsl5 + chr3L 3317588 intergenic PIG-C -,Drsl5 + chr3L 3317664 intergenic PIG-C - chr3L_17_3315001 chr3L_3315001 RAL-908 1200 chr3L 3388589 3388615 chr3L 3388696 3388713 4 105 1.5 5.0 3.2 1.0 124 chr3L 3388589 intergenic not near genes chr3L 3388651 intergenic not near genes chr3L 3388713 intergenic not near genes chr3L_4_3385001 chr3L_3385001 RAL-908 1201 chr3L 3439560 3439592 chr3L 3439667 3439699 8 107 4.0 4.5 4.2 1.5 139 chr3L 3439560 intron eIF5B - chr3L 3439630 intron eIF5B - chr3L 3439699 intron eIF5B - chr3L_8_3435001 chr3L_3435001 RAL-908 1202 chr3L 3470136 3470188 chr3L 3470232 3470284 13 96 0.5 3.0 1.8 4.6 148 chr3L 3470136 intron CG14971 - chr3L 3470210 intron CG14971 - chr3L 3470284 intron CG14971 - chr3L_13_3470001 chr3L_3470001 RAL-908 1203 chr3L 3475072 3475076 chr3L 3475534 3475540 jockey 4 464 5.0 7.0 6.0 0.6 468 chr3L 3475072 intron CG42324 + chr3L 3475306 intron CG42324 + chr3L 3475540 intron CG42324 + chr3L_4_3475001 chr3L_3475001 RAL-908 1204 chr3L 3475079 3475097 chr3L 3475523 3475561 jockey 8 460 2.0 5.5 3.8 1.7 482 chr3L 3475079 intron CG42324 + chr3L 3475320 intron CG42324 + chr3L 3475561 intron CG42324 + chr3L_8_3475001 chr3L_3475001 RAL-908 1205 chr3L 3494181 3494203 chr3L 3494276 3494300 8 97 0.5 1.5 1.0 4.0 119 chr3L 3494181 intron CG42324 + chr3L 3494240 intron CG42324 + chr3L 3494300 intron CG42324 + chr3L_8_3490001 chr3L_3490001 RAL-908 1206 chr3L 3512945 3512978 chr3L 3513045 3513077 9 99 3.5 6.0 4.8 1.6 132 chr3L 3512945 intergenic ImpE2 - chr3L 3513011 intergenic ImpE2 - chr3L 3513077 intergenic ImpE2 - chr3L_9_3510001 chr3L_3510001 RAL-908 1207 chr3L 3551421 3551464 chr3L 3551530 3551547 6 101 3.0 3.0 3.0 1.5 126 chr3L 3551421 intron Eip63E + chr3L 3551484 intron Eip63E + chr3L 3551547 intron Eip63E + chr3L_6_3550001 chr3L_3550001 RAL-908 1208 chr3L 3601291 3601315 chr3L 3606607 3606645 copia 5 5325 6.5 3.5 5.0 0.8 5354 chr3L 3601291 intron Eip63E + chr3L 3603968 intron Eip63E + chr3L 3606645 intron Eip63E + chr3L_5_3600001 chr3L_3600001 RAL-908 1209 chr3L 3622312 3622360 chr3L 3622569 3622591 13 253 2.0 5.0 3.5 2.9 279 chr3L 3622312 intergenic not near genes chr3L 3622452 intergenic not near genes chr3L 3622591 intergenic not near genes chr3L_13_3620001 chr3L_3620001 RAL-908 1210 chr3L 3656416 3656449 chr3L 3656526 3656553 8 107 7.5 4.0 5.8 1.2 137 chr3L 3656416 intergenic not near genes chr3L 3656484 intergenic not near genes chr3L 3656553 intergenic not near genes chr3L_8_3655001 chr3L_3655001 RAL-908 1211 chr3L 3763742 3763768 chr3L 3763838 3763840 5 90 4.5 0.0 2.2 1.6 98 chr3L 3763742 intron CG32264 - chr3L 3763791 intron CG32264 - chr3L 3763840 intron CG32264 - chr3L_5_3760001 chr3L_3760001 RAL-908 1212 chr3L 3766722 3766746 chr3L 3766828 3766852 4 106 3.0 0.0 1.5 1.6 130 chr3L 3766722 intron CG32264 - chr3L 3766787 intron CG32264 - chr3L 3766852 intron CG32264 - chr3L_4_3765001 chr3L_3765001 RAL-908 1213 chr3L 3773608 3773666 chr3L 3773707 3773767 5 100 0.0 0.0 0.0 5.0 159 chr3L 3773608 intron CG32264 - chr3L 3773688 intron CG32264 - chr3L 3773767 intron CG32264 - chr3L_5_3770001 chr3L_3770001 RAL-908 1214 chr3L 3783263 3783270 chr3L 3783360 3783367 5 97 6.5 6.5 6.5 0.7 104 chr3L 3783263 intron CG32264 - chr3L 3783315 intron CG32264 - chr3L 3783367 intron CG32264 - chr3L_5_3780001 chr3L_3780001 RAL-908 1215 chr3L 3797235 3797266 chr3L 3797338 3797369 13 102 1.0 2.5 1.8 4.6 134 chr3L 3797235 intron CG32264 - chr3L 3797302 intron CG32264 - chr3L 3797369 intron CG32264 - chr3L_13_3795001 chr3L_3795001 RAL-908 1216 chr3L 3815031 3815079 chr3L 3815132 3815180 11 100 3.0 2.5 2.8 2.9 149 chr3L 3815031 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815106 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815180 intron,intron Scsalpha +,CR43932 - chr3L_11_3815001 chr3L_3815001 RAL-908 1217 chr3L 3827778 3827816 chr3L 3827879 3827918 10 101 5.0 3.0 4.0 2.0 140 chr3L 3827778 intron,intron enc +,Rdh + chr3L 3827848 intron,intron enc +,Rdh + chr3L 3827918 intron,intron enc +,Rdh + chr3L_10_3825001 chr3L_3825001 RAL-908 1218 chr3L 3833725 3833761 chr3L 3833979 3834008 pogo 5 257 3.5 2.5 3.0 1.2 283 chr3L 3833725 intron enc + chr3L 3833866 intron enc + chr3L 3834008 intron enc + chr3L_5_3830001 chr3L_3830001 RAL-908 1219 chr3L 3848051 3848105 chr3L 3848147 3848201 8 96 0.0 2.0 1.0 4.0 150 chr3L 3848051 intron Awh + chr3L 3848126 intron Awh + chr3L 3848201 intron Awh + chr3L_8_3845001 chr3L_3845001 RAL-908 1220 chr3L 3890942 3890979 chr3L 3891043 3891080 12 100 4.0 0.0 2.0 4.0 138 chr3L 3890942 intergenic not near genes chr3L 3891011 intergenic not near genes chr3L 3891080 intergenic not near genes chr3L_12_3890001 chr3L_3890001 RAL-908 1221 chr3L 3914163 3914210 chr3L 3914268 3914315 12 100 1.5 2.5 2.0 4.0 152 chr3L 3914163 intron Eip63F-1 - chr3L 3914239 intron Eip63F-1 - chr3L 3914315 intron Eip63F-1 - chr3L_12_3910001 chr3L_3910001 RAL-908 1222 chr3L 3946179 3946223 chr3L 3946274 3946320 9 93 1.5 6.0 3.8 1.9 141 chr3L 3946179 3` UTR CG14982 + chr3L 3946250 3` UTR CG14982 + chr3L 3946320 3` UTR CG14982 + chr3L_9_3945001 chr3L_3945001 RAL-908 1223 chr3L 4091888 4091917 chr3L 4091988 4092017 5 96 9.5 2.5 6.0 0.7 129 chr3L 4091888 3` UTR CG14989 + chr3L 4091952 3` UTR CG14989 + chr3L 4092017 3` UTR CG14989 + chr3L_5_4090001 chr3L_4090001 RAL-908 1224 chr3L 4185654 4185694 chr3L 4185758 4185798 17 101 2.5 5.0 3.8 3.5 144 chr3L 4185654 intron,intron CG18675 +,Teh2 - chr3L 4185726 intron,intron CG18675 +,Teh2 - chr3L 4185798 intron,intron CG18675 +,Teh2 - chr3L_17_4185001 chr3L_4185001 RAL-908 1225 chr3L 4214522 4214541 chr3L 4214679 4214703 7 161 5.0 8.0 6.5 0.9 181 chr3L 4214522 intron CG43367 + chr3L 4214612 intron CG43367 + chr3L 4214703 intron CG43367 + chr3L_7_4210001 chr3L_4210001 RAL-908 1226 chr3L 4328734 4328758 chr3L 4336250 4336275 412 6 7516 3.5 2.5 3.0 1.5 7541 chr3L 4328734 intron Cip4 - chr3L 4332504 intron Cip4 - chr3L 4336275 exon Cip4 - chr3L_6_4330001 chr3L_4330001 RAL-908 1227 chr3L 4341330 4341335 chr3L 21448026 21448026 14 17106694 20.0 18.5 19.2 0.7 17106696 chr3L 4341330 intron Cip4 - chr3L 12894678 3` UTR CG14118 + chr3L 21448026 3` UTR Syx7 + chr3L_14_12890001 chr3L_12890001 RAL-908 1228 chr3L 4484737 4484750 chr3L 4484822 4484848 7 96 0.5 12.0 6.2 1.0 111 chr3L 4484737 intergenic CG11350 +,CG13722 - chr3L 4484792 intergenic CG13722 -,CG11350 + chr3L 4484848 intergenic CG13722 -,CG11350 + chr3L_7_4480001 chr3L_4480001 RAL-908 1229 chr3L 4491364 4491413 chr3L 4491477 4491526 12 113 2.0 0.0 1.0 6.0 162 chr3L 4491364 intergenic CG13722 - chr3L 4491445 intergenic CG13722 - chr3L 4491526 intergenic not near genes chr3L_12_4490001 chr3L_4490001 RAL-908 1230 chr3L 4536340 4536393 chr3L 4536461 4536514 9 120 0.5 2.0 1.2 4.1 174 chr3L 4536340 exon CG11353 + chr3L 4536427 intron CG11353 + chr3L 4536514 intron CG11353 + chr3L_9_4535001 chr3L_4535001 RAL-908 1231 chr3L 4597197 4597247 chr3L 4597299 4597349 9 100 1.5 4.5 3.0 2.2 152 chr3L 4597197 intron Src64B - chr3L 4597273 intron Src64B - chr3L 4597349 intron Src64B - chr3L_9_4595001 chr3L_4595001 RAL-908 1232 chr3L 4657965 4657994 chr3L 4658447 4658476 11 480 3.5 4.5 4.0 2.2 511 chr3L 4657965 intron axo - chr3L 4658220 intron axo - chr3L 4658476 intron axo - chr3L_11_4655001 chr3L_4655001 RAL-908 1233 chr3L 4676016 4676052 chr3L 4676117 4676153 6 101 3.0 2.0 2.5 1.7 137 chr3L 4676016 intron axo - chr3L 4676084 intron axo - chr3L 4676153 intron axo - chr3L_6_4675001 chr3L_4675001 RAL-908 1234 chr3L 4714932 4714984 chr3L 4715251 4715303 10 318 2.5 1.0 1.8 3.6 371 chr3L 4714932 intron RhoGEF64C + chr3L 4715118 intron RhoGEF64C + chr3L 4715303 intron RhoGEF64C + chr3L_10_4715001 chr3L_4715001 RAL-908 1235 chr3L 4725308 4725352 chr3L 4725416 4725436 9 99 1.5 3.5 2.5 2.6 128 chr3L 4725308 intron RhoGEF64C + chr3L 4725372 intron RhoGEF64C + chr3L 4725436 intron RhoGEF64C + chr3L_9_4725001 chr3L_4725001 RAL-908 1236 chr3L 4864441 4864470 chr3L 4864697 4864725 8 255 4.5 3.5 4.0 1.6 284 chr3L 4864441 intron CG17150 + chr3L 4864583 intron CG17150 + chr3L 4864725 intron CG17150 + chr3L_8_4860001 chr3L_4860001 RAL-908 1237 chr3L 4901114 4901160 chr3L 4907324 4907370 diver 6 6208 2.0 5.5 3.8 1.2 6256 chr3L 4901114 intergenic CG13704 + chr3L 4904242 intergenic not near genes chr3L 4907370 intergenic not near genes chr3L_6_4900001 chr3L_4900001 RAL-908 1238 chr3L 4907960 4907965 chr3L 4908056 4908061 4 96 3.5 0.5 2.0 1.3 101 chr3L 4907960 intergenic not near genes chr3L 4908010 intergenic not near genes chr3L 4908061 intergenic not near genes chr3L_4_4905001 chr3L_4905001 RAL-908 1239 chr3L 4927538 4927580 chr3L 4927767 4927811 9 229 2.0 4.0 3.0 2.2 273 chr3L 4927538 intergenic not near genes chr3L 4927674 intergenic not near genes chr3L 4927811 intergenic not near genes chr3L_9_4925001 chr3L_4925001 RAL-908 1240 chr3L 5034150 5034192 chr3L 5043322 5043364 roo 17 9172 5.0 5.5 5.2 2.7 9214 chr3L 5034150 intron Con - chr3L 5038757 intron Con - chr3L 5043364 intron Con - chr3L_17_5035001 chr3L_5035001 RAL-908 1241 chr3L 5045442 5045476 chr3L 5050243 5050277 Doc 10 4800 4.5 2.0 3.2 2.4 4835 chr3L 5045442 intron Con - chr3L 5047860 intron Con - chr3L 5050277 intron Con - chr3L_10_5045001 chr3L_5045001 RAL-908 1242 chr3L 5089121 5089143 chr3L 5089219 5089241 10 98 0.0 2.0 1.0 5.0 120 chr3L 5089121 intergenic not near genes chr3L 5089181 intergenic not near genes chr3L 5089241 intergenic not near genes chr3L_10_5085001 chr3L_5085001 RAL-908 1243 chr3L 5093524 5093558 chr3L 5093617 5093655 12 96 4.0 0.5 2.2 3.8 131 chr3L 5093524 intergenic not near genes chr3L 5093590 intergenic not near genes chr3L 5093655 intergenic not near genes chr3L_12_5090001 chr3L_5090001 RAL-908 1244 chr3L 5103594 5103614 chr3L 5103694 5103714 9 99 7.0 0.0 3.5 2.0 120 chr3L 5103594 intergenic not near genes chr3L 5103654 intergenic not near genes chr3L 5103714 intergenic not near genes chr3L_9_5100001 chr3L_5100001 RAL-908 1245 chr3L 5104473 5104504 chr3L 5124627 5124658 12 20153 0.0 3.0 1.5 4.8 20185 chr3L 5104473 intergenic not near genes chr3L 5114566 intergenic not near genes chr3L 5124658 intergenic not near genes chr3L_12_5110001 chr3L_5110001 RAL-908 1246 chr3L 5203078 5203116 chr3L 5203203 5203241 15 125 2.5 2.5 2.5 4.3 163 chr3L 5203078 intron shep - chr3L 5203160 intron shep - chr3L 5203241 intron shep - chr3L_15_5200001 chr3L_5200001 RAL-908 1247 chr3L 5226491 5226532 chr3L 5226613 5226639 10 120 2.5 3.0 2.8 2.6 148 chr3L 5226491 intron shep - chr3L 5226565 intron shep - chr3L 5226639 intron shep - chr3L_10_5225001 chr3L_5225001 RAL-908 1248 chr3L 5250071 5250073 chr3L 5250169 5250171 4 98 0.0 3.5 1.8 1.4 100 chr3L 5250071 intron shep - chr3L 5250121 intron shep - chr3L 5250171 intron shep - chr3L_4_5250001 chr3L_5250001 RAL-908 1249 chr3L 5250074 5250109 chr3L 5250155 5250206 8 95 0.0 3.0 1.5 3.2 132 chr3L 5250074 intron shep - chr3L 5250140 intron shep - chr3L 5250206 intron shep - chr3L_8_5250001 chr3L_5250001 RAL-908 1250 chr3L 5251852 5251865 chr3L 5251950 5251964 5 99 1.5 6.5 4.0 1.0 112 chr3L 5251852 intron shep - chr3L 5251908 intron shep - chr3L 5251964 intron shep - chr3L_5_5250001 chr3L_5250001 RAL-908 1251 chr3L 5261143 5261182 chr3L 5261246 5261281 4 100 0.5 2.0 1.2 1.8 138 chr3L 5261143 intron shep - chr3L 5261212 intron shep - chr3L 5261281 intron shep - chr3L_4_5260001 chr3L_5260001 RAL-908 1252 chr3L 5271167 5271178 chr3L 5271265 5271276 4 98 0.5 1.5 1.0 2.0 109 chr3L 5271167 intron shep - chr3L 5271222 intron shep - chr3L 5271276 intron shep - chr3L_4_5270001 chr3L_5270001 RAL-908 1253 chr3L 5271179 5271201 chr3L 5271254 5271298 5 93 0.5 1.5 1.0 2.5 119 chr3L 5271179 intron shep - chr3L 5271238 intron shep - chr3L 5271298 intron shep - chr3L_5_5270001 chr3L_5270001 RAL-908 1254 chr3L 5292249 5292300 chr3L 5292355 5292406 15 103 3.5 7.0 5.2 2.4 157 chr3L 5292249 intergenic not near genes chr3L 5292328 intergenic not near genes chr3L 5292406 intergenic not near genes chr3L_15_5290001 chr3L_5290001 RAL-908 1255 chr3L 5299135 5299183 chr3L 5306591 5306639 Quasimodo 16 7456 4.0 3.0 3.5 3.6 7504 chr3L 5299135 intergenic not near genes chr3L 5302887 intergenic not near genes chr3L 5306639 intergenic not near genes chr3L_16_5300001 chr3L_5300001 RAL-908 1256 chr3L 5310364 5310385 chr3L 5310511 5310529 5 145 1.0 6.5 3.8 1.0 165 chr3L 5310364 intergenic not near genes chr3L 5310446 intergenic not near genes chr3L 5310529 intergenic not near genes chr3L_5_5310001 chr3L_5310001 RAL-908 1257 chr3L 5327453 5327478 chr3L 5327558 5327583 13 105 2.5 4.5 3.5 2.9 130 chr3L 5327453 intergenic not near genes chr3L 5327518 intergenic not near genes chr3L 5327583 intergenic not near genes chr3L_13_5325001 chr3L_5325001 RAL-908 1258 chr3L 5376020 5376041 chr3L 5376119 5376134 9 98 0.0 3.5 1.8 3.2 114 chr3L 5376020 intergenic not near genes chr3L 5376077 intergenic not near genes chr3L 5376134 intergenic not near genes chr3L_9_5375001 chr3L_5375001 RAL-908 1259 chr3L 5387665 5387696 chr3L 5387942 5387973 8 274 0.0 6.5 3.2 1.9 308 chr3L 5387665 intergenic not near genes chr3L 5387819 intergenic not near genes chr3L 5387973 intergenic not near genes chr3L_8_5385001 chr3L_5385001 RAL-908 1260 chr3L 5396472 5396495 chr3L 5396579 5396602 4 107 0.0 0.5 0.2 3.3 130 chr3L 5396472 intergenic not near genes chr3L 5396537 intergenic not near genes chr3L 5396602 intergenic not near genes chr3L_4_5395001 chr3L_5395001 RAL-908 1261 chr3L 5482920 5483078 chr3L 5483149 5483196 10 178 0.0 0.0 0.0 10.0 276 chr3L 5482920 exon CG4835 + chr3L 5483058 exon CG4835 + chr3L 5483196 exon CG4835 + chr3L_10_5480001 chr3L_5480001 RAL-908 1262 chr3L 5493985 5494023 chr3L 5494078 5494124 9 100 1.0 2.0 1.5 3.6 139 chr3L 5493985 3` UTR CR44520 - chr3L 5494054 3` UTR CR44520 - chr3L 5494124 3` UTR CR44520 - chr3L_9_5490001 chr3L_5490001 RAL-908 1263 chr3L 5520479 5520496 chr3L 5520583 5520600 7 104 5.5 4.0 4.8 1.2 121 chr3L 5520479 intron Lkr - chr3L 5520540 intron Lkr - chr3L 5520600 intron Lkr - chr3L_7_5520001 chr3L_5520001 RAL-908 1264 chr3L 5520497 5520528 chr3L 5520582 5520632 5 100 2.5 4.0 3.2 1.2 135 chr3L 5520497 intron Lkr - chr3L 5520564 intron Lkr - chr3L 5520632 intron Lkr - chr3L_5_5520001 chr3L_5520001 RAL-908 1265 chr3L 5521472 5521524 chr3L 5521581 5521632 17 108 3.5 1.0 2.2 5.3 160 chr3L 5521472 intron Lkr - chr3L 5521552 intron Lkr - chr3L 5521632 intron Lkr - chr3L_17_5520001 chr3L_5520001 RAL-908 1266 chr3L 5537703 5537750 chr3L 5538065 5538111 jockey 12 362 2.5 5.0 3.8 2.5 408 chr3L 5537703 intergenic not near genes chr3L 5537907 intergenic not near genes chr3L 5538111 intergenic CG10625 - chr3L_12_5535001 chr3L_5535001 RAL-908 1267 chr3L 5581457 5581484 chr3L 5581563 5581588 8 106 7.5 5.0 6.2 1.1 131 chr3L 5581457 intergenic not near genes chr3L 5581522 intergenic not near genes chr3L 5581588 intergenic not near genes chr3L_8_5580001 chr3L_5580001 RAL-908 1268 chr3L 5666265 5666317 chr3L 5666377 5666421 6 109 0.0 0.0 0.0 6.0 156 chr3L 5666265 intron sif + chr3L 5666343 intron sif + chr3L 5666421 intron sif + chr3L_6_5665001 chr3L_5665001 RAL-908 1269 chr3L 5809954 5809979 chr3L 5810042 5810075 4 93 1.5 1.0 1.2 1.8 121 chr3L 5809954 intron S6k - chr3L 5810014 intron S6k - chr3L 5810075 intron S6k - chr3L_4_5810001 chr3L_5810001 RAL-908 1270 chr3L 5899322 5899367 chr3L 5899428 5899473 10 102 1.0 3.0 2.0 3.3 151 chr3L 5899322 exon CG5592 + chr3L 5899398 intergenic CG5592 +,CG32409 + chr3L 5899473 intergenic CG32409 +,CG5592 + chr3L_10_5895001 chr3L_5895001 RAL-908 1271 chr3L 5910014 5910064 chr3L 5910275 5910325 pogo 12 260 3.0 6.5 4.8 2.1 311 chr3L 5910014 intron CG13288 + chr3L 5910170 intron CG13288 + chr3L 5910325 intron CG13288 + chr3L_12_5910001 chr3L_5910001 RAL-908 1272 chr3L 5926318 5926344 chr3L 5926511 5926545 BS 8 204 5.0 5.0 5.0 1.3 227 chr3L 5926318 intron Vap-33B + chr3L 5926432 intron Vap-33B + chr3L 5926545 intron Vap-33B + chr3L_8_5925001 chr3L_5925001 RAL-908 1273 chr3L 5969371 5969402 chr3L 5969843 5969887 10 483 3.0 1.5 2.2 3.1 516 chr3L 5969371 intron CG10479 - chr3L 5969629 intron CG10479 - chr3L 5969887 intron CG10479 - chr3L_10_5965001 chr3L_5965001 RAL-908 1274 chr3L 5983819 5983866 chr3L 5983953 5984007 6 140 5.5 0.0 2.8 1.6 188 chr3L 5983819 3` UTR CR45439 - chr3L 5983913 intergenic CR45439 -,CR45440 - chr3L 5984007 intergenic CR45440 -,CR45439 - chr3L_6_5980001 chr3L_5980001 RAL-908 1275 chr3L 5987024 5987043 chr3L 5987124 5987144 5 101 2.0 2.0 2.0 1.7 120 chr3L 5987024 intergenic not near genes chr3L 5987084 intergenic not near genes chr3L 5987144 intergenic not near genes chr3L_5_5985001 chr3L_5985001 RAL-908 1276 chr3L 5992576 5992620 chr3L 5992698 5992740 16 122 4.0 5.5 4.8 2.8 164 chr3L 5992576 intergenic not near genes chr3L 5992658 intergenic not near genes chr3L 5992740 intergenic not near genes chr3L_16_5990001 chr3L_5990001 RAL-908 1277 chr3L 6001665 6001701 chr3L 6004385 6004421 jockey 6 2720 1.5 2.0 1.8 2.1 2756 chr3L 6001665 intron PVRAP + chr3L 6003043 intron PVRAP + chr3L 6004421 intron PVRAP + chr3L_6_6000001 chr3L_6000001 RAL-908 1278 chr3L 6040358 6040393 chr3L 6042722 6042769 Doc 8 2374 4.5 3.5 4.0 1.6 2411 chr3L 6040358 intergenic Jon65Aiv + chr3L 6041564 intergenic not near genes chr3L 6042769 intergenic not near genes chr3L_8_6040001 chr3L_6040001 RAL-908 1279 chr3L 6064994 6065045 chr3L 6065091 6065142 19 97 6.5 4.0 5.2 3.1 148 chr3L 6064994 intergenic not near genes chr3L 6065068 intergenic not near genes chr3L 6065142 intergenic not near genes chr3L_19_6065001 chr3L_6065001 RAL-908 1280 chr3L 6220897 6220945 chr3L 6230069 6230113 roo 17 9171 5.5 5.0 5.2 2.7 9216 chr3L 6220897 5` UTR pncr008:3L + chr3L 6225505 intergenic not near genes chr3L 6230113 intergenic not near genes chr3L_17_6225001 chr3L_6225001 RAL-908 1281 chr3L 6278202 6278239 chr3L 6278298 6278335 4 96 3.0 0.5 1.8 1.4 133 chr3L 6278202 intergenic not near genes chr3L 6278268 intergenic not near genes chr3L 6278335 intergenic not near genes chr3L_4_6275001 chr3L_6275001 RAL-908 1282 chr3L 6284942 6284977 chr3L 6285056 6285091 12 114 4.5 2.5 3.5 2.7 149 chr3L 6284942 intergenic not near genes chr3L 6285016 intergenic not near genes chr3L 6285091 intergenic not near genes chr3L_12_6285001 chr3L_6285001 RAL-908 1283 chr3L 6334989 6335033 chr3L 6335479 6335524 297 5 490 5.0 4.0 4.5 0.9 535 chr3L 6334989 intron CG13300 - chr3L 6335256 intron CG13300 - chr3L 6335524 intron CG13300 - chr3L_5_6335001 chr3L_6335001 RAL-908 1284 chr3L 6362364 6362411 chr3L 6362461 6362508 15 97 3.0 1.5 2.2 4.7 144 chr3L 6362364 intergenic not near genes chr3L 6362436 intergenic not near genes chr3L 6362508 intergenic not near genes chr3L_15_6360001 chr3L_6360001 RAL-908 1285 chr3L 6371425 6371452 chr3L 6371524 6371530 4 94 0.5 2.5 1.5 1.6 105 chr3L 6371425 intergenic not near genes chr3L 6371478 intergenic not near genes chr3L 6371530 intergenic not near genes chr3L_4_6370001 chr3L_6370001 RAL-908 1286 chr3L 6405640 6405685 chr3L 6432124 6432169 roo 11 26482 7.5 4.0 5.8 1.6 26529 chr3L 6405640 intron CG42747 + chr3L 6418904 intron CG42747 + chr3L 6432169 intron CG42747 + chr3L_11_6415001 chr3L_6415001 RAL-908 1287 chr3L 6524725 6524772 chr3L 6524841 6524886 7 116 3.0 3.0 3.0 1.8 161 chr3L 6524725 intron sfl + chr3L 6524806 intron sfl + chr3L 6524886 intron sfl + chr3L_7_6520001 chr3L_6520001 RAL-908 1288 chr3L 6573638 6573663 chr3L 6573761 6573786 8 123 2.0 3.0 2.5 2.3 148 chr3L 6573638 intron,intron CG18769 +,jv - chr3L 6573712 intron,intron CG18769 +,jv - chr3L 6573786 intron,intron CG18769 +,jv - chr3L_8_6570001 chr3L_6570001 RAL-908 1289 chr3L 6573668 6573688 chr3L 6573757 6573811 4 102 0.0 3.0 1.5 1.6 143 chr3L 6573668 intron,intron CG18769 +,jv - chr3L 6573740 intron,intron CG18769 +,jv - chr3L 6573811 intron,intron CG18769 +,jv - chr3L_4_6570001 chr3L_6570001 RAL-908 1290 chr3L 6604289 6604300 chr3L 6604386 6604397 5 97 0.5 15.0 7.8 0.6 108 chr3L 6604289 intron CG8368 + chr3L 6604343 intron CG8368 + chr3L 6604397 intron,3` UTR CG8368 +,zpg - chr3L_5_6600001 chr3L_6600001 RAL-908 1291 chr3L 6620522 6620539 chr3L 6621054 6621083 Rt1c 4 541 3.5 2.0 2.8 1.1 561 chr3L 6620522 intergenic not near genes chr3L 6620802 intergenic not near genes chr3L 6621083 intergenic not near genes chr3L_4_6620001 chr3L_6620001 RAL-908 1292 chr3L 6642862 6643151 chr3L 6642962 6643259 17 102 4.0 0.0 2.0 5.7 397 chr3L 6642862 intergenic CR45239 + chr3L 6643060 intergenic CR45239 + chr3L 6643259 intergenic CR45239 + chr3L_17_6640001 chr3L_6640001 RAL-908 1293 chr3L 6643167 6643174 chr3L 6643234 6643282 5 92 0.5 4.0 2.2 1.6 115 chr3L 6643167 intergenic CR45239 + chr3L 6643224 intergenic CR45239 + chr3L 6643282 intergenic CR45239 + chr3L_5_6640001 chr3L_6640001 RAL-908 1294 chr3L 6654203 6654219 chr3L 6654472 6654488 7 267 6.5 4.0 5.2 1.1 285 chr3L 6654203 intergenic not near genes chr3L 6654346 intergenic not near genes chr3L 6654488 intergenic not near genes chr3L_7_6650001 chr3L_6650001 RAL-908 1295 chr3L 6781108 6781144 chr3L 6783141 6783177 Doc 9 2032 3.5 5.0 4.2 1.7 2069 chr3L 6781108 intergenic not near genes chr3L 6782142 intergenic not near genes chr3L 6783177 intergenic not near genes chr3L_9_6780001 chr3L_6780001 RAL-908 1296 chr3L 6835910 6835922 chr3L 6836008 6836020 5 97 7.0 3.0 5.0 0.8 110 chr3L 6835910 intergenic not near genes chr3L 6835965 intergenic not near genes chr3L 6836020 intergenic not near genes chr3L_5_6835001 chr3L_6835001 RAL-908 1297 chr3L 6855912 6855938 chr3L 6860715 6860733 Doc 5 4802 1.5 2.0 1.8 1.8 4821 chr3L 6855912 intergenic not near genes chr3L 6858322 intergenic not near genes chr3L 6860733 intergenic not near genes chr3L_5_6855001 chr3L_6855001 RAL-908 1298 chr3L 6868711 6868742 chr3L 6868809 6868839 10 98 0.0 4.0 2.0 3.3 128 chr3L 6868711 intergenic not near genes chr3L 6868775 intergenic not near genes chr3L 6868839 intergenic not near genes chr3L_10_6865001 chr3L_6865001 RAL-908 1299 chr3L 6887506 6887545 chr3L 6895018 6895050 roo 15 7508 7.0 4.0 5.5 2.3 7544 chr3L 6887506 intergenic not near genes chr3L 6891278 intergenic not near genes chr3L 6895050 intergenic not near genes chr3L_15_6890001 chr3L_6890001 RAL-908 1300 chr3L 6934318 6934360 chr3L 6934449 6934491 9 131 5.0 1.5 3.2 2.1 173 chr3L 6934318 exon CG14820 + chr3L 6934404 intron CG14820 + chr3L 6934491 exon CG14820 + chr3L_9_6930001 chr3L_6930001 RAL-908 1301 chr3L 6974485 6974516 chr3L 6974605 6974637 6 120 0.5 3.5 2.0 2.0 152 chr3L 6974485 intron Galphai - chr3L 6974561 intron Galphai - chr3L 6974637 intron Galphai - chr3L_6_6970001 chr3L_6970001 RAL-908 1302 chr3L 6994876 6994915 chr3L 6995507 6995546 BS 11 631 1.0 4.5 2.8 2.9 670 chr3L 6994876 intergenic bin + chr3L 6995211 intergenic not near genes chr3L 6995546 intergenic not near genes chr3L_11_6995001 chr3L_6995001 RAL-908 1303 chr3L 7079787 7079837 chr3L 7079919 7079969 13 132 2.0 6.0 4.0 2.6 182 chr3L 7079787 intergenic not near genes chr3L 7079878 intergenic not near genes chr3L 7079969 intergenic not near genes chr3L_13_7075001 chr3L_7075001 RAL-908 1304 chr3L 7112567 7112612 chr3L 7112674 7112719 15 106 5.5 5.0 5.2 2.4 152 chr3L 7112567 intron form3 + chr3L 7112643 intron form3 + chr3L 7112719 intron form3 + chr3L_15_7110001 chr3L_7110001 RAL-908 1305 chr3L 7129927 7129979 chr3L 7130139 7130191 BS 13 210 3.5 3.5 3.5 2.9 264 chr3L 7129927 intergenic CG15829 + chr3L 7130059 intergenic CG15829 + chr3L 7130191 intergenic not near genes chr3L_13_7130001 chr3L_7130001 RAL-908 1306 chr3L 7175016 7175059 chr3L 7175266 7175309 16 248 2.5 2.5 2.5 4.6 293 chr3L 7175016 intron Dscam2 - chr3L 7175162 intron Dscam2 - chr3L 7175309 intron Dscam2 - chr3L_16_7175001 chr3L_7175001 RAL-908 1307 chr3L 7218090 7218111 chr3L 7218188 7218208 7 97 1.0 2.5 1.8 2.5 118 chr3L 7218090 intergenic not near genes chr3L 7218149 intergenic not near genes chr3L 7218208 intergenic not near genes chr3L_7_7215001 chr3L_7215001 RAL-908 1308 chr3L 7244914 7244964 chr3L 7245026 7245045 13 104 2.5 3.0 2.8 3.4 131 chr3L 7244914 exon mei-P22 + chr3L 7244980 exon mei-P22 + chr3L 7245045 exon mei-P22 + chr3L_13_7240001 chr3L_7240001 RAL-908 1309 chr3L 7285431 7285471 chr3L 7285529 7285569 13 98 3.5 1.5 2.5 3.7 138 chr3L 7285431 intron unc-13-4A - chr3L 7285500 intron unc-13-4A - chr3L 7285569 intron unc-13-4A - chr3L_13_7285001 chr3L_7285001 RAL-908 1310 chr3L 7311571 7311615 chr3L 7311682 7311726 12 109 6.0 2.5 4.2 2.3 155 chr3L 7311571 intron unc-13-4A - chr3L 7311648 intron unc-13-4A - chr3L 7311726 intron unc-13-4A - chr3L_12_7310001 chr3L_7310001 RAL-908 1311 chr3L 7311616 7311618 chr3L 7311680 7311729 5 101 5.5 2.5 4.0 1.0 113 chr3L 7311616 intron unc-13-4A - chr3L 7311672 intron unc-13-4A - chr3L 7311729 intron unc-13-4A - chr3L_5_7310001 chr3L_7310001 RAL-908 1312 chr3L 7358279 7358325 chr3L 7359583 7359629 7 1294 16.0 18.0 17.0 0.4 1350 chr3L 7358279 exon pst - chr3L 7358954 exon pst - chr3L 7359629 intron pst - chr3L_7_7355001 chr3L_7355001 RAL-908 1313 chr3L 7357187 7357194 chr3L 7360287 7360294 5 3100 35.5 26.0 30.8 0.2 3107 chr3L 7357187 intergenic pst -,CTCF - chr3L 7358740 exon pst - chr3L 7360294 intergenic pst -,Sec63 + chr3L_5_7355001 chr3L_7355001 RAL-908 1314 chr3L 7377298 7377347 chr3L 7380423 7380472 297 10 3125 5.0 3.0 4.0 2.0 3174 chr3L 7377298 intron SMSr - chr3L 7378885 intron SMSr - chr3L 7380472 intron SMSr - chr3L_10_7375001 chr3L_7375001 RAL-908 1315 chr3L 7444004 7444023 chr3L 7444122 7444141 11 118 8.5 0.0 4.2 2.1 137 chr3L 7444004 intron CG42458 + chr3L 7444072 intron CG42458 + chr3L 7444141 intron CG42458 + chr3L_11_7440001 chr3L_7440001 RAL-908 1316 chr3L 7498746 7498783 chr3L 7503543 7503580 F-element 8 4797 6.5 7.5 7.0 1.0 4834 chr3L 7498746 5` UTR CG8539 - chr3L 7501163 intergenic not near genes chr3L 7503580 intergenic not near genes chr3L_8_7500001 chr3L_7500001 RAL-908 1317 chr3L 7505412 7505433 chr3L 7505508 7505529 7 95 0.5 6.5 3.5 1.6 117 chr3L 7505412 intergenic CG7548 - chr3L 7505470 intergenic CG7548 - chr3L 7505529 intergenic CG7548 - chr3L_7_7505001 chr3L_7505001 RAL-908 1318 chr3L 7691812 7691858 chr3L 7691924 7691969 17 111 3.5 2.0 2.8 4.5 157 chr3L 7691812 intron,intron,intron CG32373 +,Ank2 -,CG44195 - chr3L 7691890 intron,intron,intron CG32373 +,Ank2 -,CG44195 - chr3L 7691969 intron,intron,intron CG32373 +,Ank2 -,CG44195 - chr3L_17_7690001 chr3L_7690001 RAL-908 1319 chr3L 7793692 7793738 chr3L 7800764 7800810 297 13 7071 4.0 5.5 4.8 2.2 7118 chr3L 7793692 intron CG32369 - chr3L 7797251 intron CG32369 - chr3L 7800810 intron CG32369 - chr3L_13_7795001 chr3L_7795001 RAL-908 1320 chr3L 7838762 7838799 chr3L 7839416 7839453 14 654 2.5 5.0 3.8 2.9 691 chr3L 7838762 intron Pdp1 - chr3L 7839108 intron Pdp1 - chr3L 7839453 intron Pdp1 - chr3L_14_7835001 chr3L_7835001 RAL-908 1321 chr3L 7845368 7845378 chr3L 7845471 7845474 4 101 14.5 4.5 9.5 0.4 106 chr3L 7845368 intron Pdp1 - chr3L 7845421 intron Pdp1 - chr3L 7845474 intron Pdp1 - chr3L_4_7845001 chr3L_7845001 RAL-908 1322 chr3L 7886505 7886545 chr3L 7889033 7889082 Stalker4 6 2536 0.5 2.0 1.2 2.7 2577 chr3L 7886505 intron CG32365 + chr3L 7887794 intron CG32365 + chr3L 7889082 intron CG32365 + chr3L_6_7885001 chr3L_7885001 RAL-908 1323 chr3L 7916815 7916861 chr3L 7926006 7926052 roo 16 9191 2.0 6.5 4.2 3.1 9237 chr3L 7916815 3` UTR syd - chr3L 7921434 intron syd - chr3L 7926052 3` UTR syd - chr3L_16_7920001 chr3L_7920001 RAL-908 1324 chr3L 7956470 7956477 chr3L 7956568 7956575 4 98 0.0 4.0 2.0 1.3 105 chr3L 7956470 intergenic not near genes chr3L 7956522 intergenic not near genes chr3L 7956575 intergenic not near genes chr3L_4_7955001 chr3L_7955001 RAL-908 1325 chr3L 7963655 7963658 chr3L 13791617 13791620 4 5827962 3.0 22.0 12.5 0.3 5827965 chr3L 7963655 intergenic not near genes chr3L 10877638 exon CG6418 - chr3L 13791620 intron bru-3 - chr3L_4_10875001 chr3L_10875001 RAL-908 1326 chr3L 7985344 7985392 chr3L 7987692 7987740 NOF 22 2347 5.0 2.5 3.8 4.6 2396 chr3L 7985344 intron nmo + chr3L 7986542 intron nmo + chr3L 7987740 intron nmo + chr3L_22_7985001 chr3L_7985001 RAL-908 1327 chr3L 8019730 8019737 chr3L 8024160 8024173 NOF 6 4435 0.0 7.0 3.5 1.3 4443 chr3L 8019730 intron nmo + chr3L 8021952 intron nmo + chr3L 8024173 intron nmo + chr3L_6_8020001 chr3L_8020001 RAL-908 1328 chr3L 8064580 8064632 chr3L 8064814 8064868 5 233 4.5 0.0 2.2 1.6 288 chr3L 8064580 intron Ect4 + chr3L 8064724 intron Ect4 + chr3L 8064868 intron Ect4 + chr3L_5_8060001 chr3L_8060001 RAL-908 1329 chr3L 8166096 8166141 chr3L 8166334 8166379 12 238 2.0 4.5 3.2 2.9 283 chr3L 8166096 intergenic not near genes chr3L 8166238 intergenic not near genes chr3L 8166379 intergenic not near genes chr3L_12_8165001 chr3L_8165001 RAL-908 1330 chr3L 8208119 8208155 chr3L 8208271 8208306 8 150 3.0 2.5 2.8 2.1 187 chr3L 8208119 intergenic not near genes chr3L 8208212 intergenic not near genes chr3L 8208306 intergenic not near genes chr3L_8_8205001 chr3L_8205001 RAL-908 1331 chr3L 8214724 8214761 chr3L 8214819 8214867 8 101 1.5 4.0 2.8 2.1 143 chr3L 8214724 intergenic not near genes chr3L 8214796 intergenic CG8012 + chr3L 8214867 intergenic CG8012 + chr3L_8_8210001 chr3L_8210001 RAL-908 1332 chr3L 8226694 8226718 chr3L 8226813 8226837 6 119 8.5 0.0 4.2 1.2 143 chr3L 8226694 intergenic not near genes chr3L 8226766 intergenic not near genes chr3L 8226837 intergenic not near genes chr3L_6_8225001 chr3L_8225001 RAL-908 1333 chr3L 8364504 8364536 chr3L 8364615 8364647 8 111 4.0 1.0 2.5 2.3 143 chr3L 8364504 intergenic not near genes chr3L 8364576 intergenic not near genes chr3L 8364647 intergenic not near genes chr3L_8_8360001 chr3L_8360001 RAL-908 1334 chr3L 8442910 8442923 chr3L 8443011 8443024 6 101 0.5 7.0 3.8 1.2 114 chr3L 8442910 intergenic CG6983 - chr3L 8442967 intergenic CG6983 - chr3L 8443024 intergenic CG6983 - chr3L_6_8440001 chr3L_8440001 RAL-908 1335 chr3L 8442926 8442945 chr3L 8443001 8443046 8 94 0.5 6.0 3.2 1.9 120 chr3L 8442926 intergenic CG6983 - chr3L 8442986 intergenic CG6983 - chr3L 8443046 3` UTR CG6983 - chr3L_8_8440001 chr3L_8440001 RAL-908 1336 chr3L 8456457 8456484 chr3L 8456570 8456593 7 108 12.5 6.5 9.5 0.7 136 chr3L 8456457 intron Gug + chr3L 8456525 intron Gug + chr3L 8456593 intron Gug + chr3L_7_8455001 chr3L_8455001 RAL-908 1337 chr3L 8498284 8498324 chr3L 8505764 8505811 blood 6 7483 4.5 3.0 3.8 1.2 7527 chr3L 8498284 intron CG43163 - chr3L 8502048 intron CG43163 - chr3L 8505811 intron CG43163 - chr3L_6_8500001 chr3L_8500001 RAL-908 1338 chr3L 8576257 8576277 chr3L 8576371 8576391 10 114 2.0 1.0 1.5 4.0 134 chr3L 8576257 intergenic CG6638 - chr3L 8576324 intergenic CG6638 -,CG43078 + chr3L 8576391 intergenic CG6638 -,CG43078 + chr3L_10_8575001 chr3L_8575001 RAL-908 1339 chr3L 8619494 8619544 chr3L 8619603 8619653 15 109 2.0 5.0 3.5 3.3 159 chr3L 8619494 intergenic S-Lap1 +,S-Lap2 + chr3L 8619574 intergenic S-Lap1 +,S-Lap2 + chr3L 8619653 intergenic S-Lap1 +,S-Lap2 + chr3L_15_8615001 chr3L_8615001 RAL-908 1340 chr3L 8644627 8644646 chr3L 8644707 8644736 4 90 0.0 2.5 1.2 1.8 109 chr3L 8644627 intergenic CG13305 - chr3L 8644682 intergenic CG13305 - chr3L 8644736 intergenic CG13305 - chr3L_4_8640001 chr3L_8640001 RAL-908 1341 chr3L 8656226 8656239 chr3L 8656350 8656357 4 122 3.0 4.5 3.8 0.8 131 chr3L 8656226 intergenic not near genes chr3L 8656292 intergenic not near genes chr3L 8656357 intergenic not near genes chr3L_4_8655001 chr3L_8655001 RAL-908 1342 chr3L 7997135 7997138 chr3L 8712522 8712525 4 715387 21.5 12.5 17.0 0.2 715390 chr3L 7997135 intron nmo + chr3L 8354830 intron CG17352 - chr3L 8712525 intergenic not near genes chr3L_4_8350001 chr3L_8350001 RAL-908 1343 chr3L 8754265 8754314 chr3L 8754366 8754416 19 98 4.0 7.0 5.5 2.9 151 chr3L 8754265 5` UTR Fhos + chr3L 8754340 5` UTR Fhos + chr3L 8754416 5` UTR Fhos + chr3L_19_8750001 chr3L_8750001 RAL-908 1344 chr3L 8772035 8772083 chr3L 8772132 8772181 20 98 5.5 4.5 5.0 3.3 146 chr3L 8772035 intron Fhos + chr3L 8772108 intron Fhos + chr3L 8772181 intron Fhos + chr3L_20_8770001 chr3L_8770001 RAL-908 1345 chr3L 8846183 8846206 chr3L 8846284 8846307 13 101 3.0 3.5 3.2 3.1 124 chr3L 8846183 intron dally + chr3L 8846245 intron dally + chr3L 8846307 intron dally + chr3L_13_8845001 chr3L_8845001 RAL-908 1346 chr3L 8884386 8884414 chr3L 8884605 8884633 8 219 3.5 0.5 2.0 2.7 247 chr3L 8884386 intron dally + chr3L 8884510 intron dally + chr3L 8884633 intron dally + chr3L_8_8880001 chr3L_8880001 RAL-908 1347 chr3L 8959380 8959400 chr3L 8959560 8959581 10 180 5.5 4.5 5.0 1.7 201 chr3L 8959380 intron CG13313 + chr3L 8959480 intron CG13313 + chr3L 8959581 intron CG13313 + chr3L_10_8955001 chr3L_8955001 RAL-908 1348 chr3L 9003928 9003977 chr3L 9004033 9004082 10 105 2.0 4.0 3.0 2.5 154 chr3L 9003928 intergenic not near genes chr3L 9004005 intergenic not near genes chr3L 9004082 intergenic not near genes chr3L_10_9000001 chr3L_9000001 RAL-908 1349 chr3L 9038755 9038803 chr3L 9038869 9038907 12 112 2.5 1.0 1.8 4.3 152 chr3L 9038755 intergenic not near genes chr3L 9038831 intergenic not near genes chr3L 9038907 intergenic not near genes chr3L_12_9035001 chr3L_9035001 RAL-908 1350 chr3L 9047072 9047077 chr3L 9047179 9047184 4 107 2.5 0.0 1.2 1.8 112 chr3L 9047072 intergenic CG5144 + chr3L 9047128 intergenic CG5144 + chr3L 9047184 intergenic CG5144 + chr3L_4_9045001 chr3L_9045001 RAL-908 1351 chr3L 9076911 9076952 chr3L 9084490 9084532 412 7 7580 1.0 5.0 3.0 1.8 7621 chr3L 9076911 exon Tequila + chr3L 9080722 intron Tequila + chr3L 9084532 exon Tequila + chr3L_7_9080001 chr3L_9080001 RAL-908 1352 chr3L 9086900 9086920 chr3L 9087003 9087023 4 103 5.0 6.0 5.5 0.6 123 chr3L 9086900 exon Tequila + chr3L 9086962 exon Tequila + chr3L 9087023 exon Tequila + chr3L_4_9085001 chr3L_9085001 RAL-908 1353 chr3L 9130539 9130581 chr3L 9134320 9134361 412 6 3778 4.0 2.0 3.0 1.5 3822 chr3L 9130539 intergenic bol - chr3L 9132450 intergenic not near genes chr3L 9134361 intergenic Dhpr + chr3L_6_9130001 chr3L_9130001 RAL-908 1354 chr3L 9164689 9164716 chr3L 9166161 9166197 hobo 9 1482 5.5 0.0 2.8 2.4 1508 chr3L 9164689 intron Rdl - chr3L 9165443 intron Rdl - chr3L 9166197 intron Rdl - chr3L_9_9165001 chr3L_9165001 RAL-908 1355 chr3L 9213222 9213239 chr3L 9213322 9213339 6 100 3.5 2.0 2.8 1.6 117 chr3L 9213222 intron CG4476 + chr3L 9213280 intron CG4476 + chr3L 9213339 intron CG4476 + chr3L_6_9210001 chr3L_9210001 RAL-908 1356 chr3L 9219227 9219245 chr3L 9219919 9219937 jockey 4 692 4.0 3.0 3.5 0.9 710 chr3L 9219227 intergenic not near genes chr3L 9219582 intergenic not near genes chr3L 9219937 intergenic not near genes chr3L_4_9215001 chr3L_9215001 RAL-908 1357 chr3L 9219248 9219271 chr3L 9219911 9219958 jockey 5 682 2.5 2.5 2.5 1.4 710 chr3L 9219248 intergenic not near genes chr3L 9219603 intergenic not near genes chr3L 9219958 intergenic not near genes chr3L_5_9215001 chr3L_9215001 RAL-908 1358 chr3L 9270617 9270644 chr3L 9278380 9278415 roo 4 7769 4.5 2.0 3.2 1.0 7798 chr3L 9270617 intron GluRIB + chr3L 9274516 intron GluRIB + chr3L 9278415 exon GluRIB + chr3L_4_9270001 chr3L_9270001 RAL-908 1359 chr3L 9307796 9307796 chr3L 22908066 22908066 6 13600270 13.5 18.0 15.8 0.4 13600270 chr3L 9307796 intergenic not near genes chr3L 16107931 intron Zn72D - chr3L 22908066 intergenic not near genes chr3L_6_16105001 chr3L_16105001 RAL-908 1360 chr3L 9314050 9314062 chr3L 9314148 9314160 6 98 0.0 0.5 0.2 5.0 110 chr3L 9314050 intergenic not near genes chr3L 9314105 intergenic not near genes chr3L 9314160 intergenic not near genes chr3L_6_9310001 chr3L_9310001 RAL-908 1361 chr3L 9359581 9359620 chr3L 9359692 9359731 15 111 2.0 4.0 3.0 3.8 150 chr3L 9359581 3` UTR CG32039 + chr3L 9359656 3` UTR CG32039 + chr3L 9359731 3` UTR CG32039 + chr3L_15_9355001 chr3L_9355001 RAL-908 1362 chr3L 9443492 9443520 chr3L 9445303 9445327 S-element 5 1810 8.5 1.0 4.8 0.9 1835 chr3L 9443492 intron CG33926 + chr3L 9444410 intron CG33926 + chr3L 9445327 intron CG33926 + chr3L_5_9440001 chr3L_9440001 RAL-908 1363 chr3L 9502600 9502642 chr3L 9502700 9502742 15 100 4.0 3.5 3.8 3.1 142 chr3L 9502600 intron path - chr3L 9502671 intron path - chr3L 9502742 intron path - chr3L_15_9500001 chr3L_9500001 RAL-908 1364 chr3L 9503451 9503462 chr3L 9503560 9503571 4 109 3.0 5.5 4.2 0.8 120 chr3L 9503451 intron path - chr3L 9503511 intron path - chr3L 9503571 intron path - chr3L_4_9500001 chr3L_9500001 RAL-908 1365 chr3L 9513429 9513475 chr3L 9513536 9513582 25 106 2.0 5.0 3.5 5.6 153 chr3L 9513429 intergenic CG33702 - chr3L 9513506 intergenic CG33702 - chr3L 9513582 intergenic CG33702 - chr3L_25_9510001 chr3L_9510001 RAL-908 1366 chr3L 9526506 9526518 chr3L 9528191 9528203 Doc 5 1685 2.5 2.0 2.2 1.6 1697 chr3L 9526506 intergenic not near genes chr3L 9527354 intergenic not near genes chr3L 9528203 intergenic not near genes chr3L_5_9525001 chr3L_9525001 RAL-908 1367 chr3L 9571892 9571928 chr3L 9572260 9572296 jockey 11 368 5.5 3.0 4.2 2.1 404 chr3L 9571892 intron CG42673 + chr3L 9572094 intron CG42673 + chr3L 9572296 intron CG42673 + chr3L_11_9570001 chr3L_9570001 RAL-908 1368 chr3L 9572279 9572322 chr3L 9572378 9572421 7 99 2.5 0.5 1.5 2.8 142 chr3L 9572279 intron CG42673 + chr3L 9572350 intron CG42673 + chr3L 9572421 intron CG42673 + chr3L_7_9570001 chr3L_9570001 RAL-908 1369 chr3L 9575891 9575934 chr3L 9580991 9581034 jockey 10 5099 6.0 4.0 5.0 1.7 5143 chr3L 9575891 intron CG42673 + chr3L 9578462 intron CG42673 + chr3L 9581034 intron CG42673 + chr3L_10_9575001 chr3L_9575001 RAL-908 1370 chr3L 9637832 9637882 chr3L 9637933 9637984 10 100 4.0 1.5 2.8 2.6 152 chr3L 9637832 exon fry - chr3L 9637908 intron fry - chr3L 9637984 intron fry - chr3L_10_9635001 chr3L_9635001 RAL-908 1371 chr3L 9673005 9673051 chr3L 9673116 9673162 17 111 7.5 4.5 6.0 2.4 157 chr3L 9673005 intron fry - chr3L 9673084 intron fry - chr3L 9673162 intron fry - chr3L_17_9670001 chr3L_9670001 RAL-908 1372 chr3L 9693602 9693631 chr3L 9693704 9693733 5 101 2.5 2.5 2.5 1.4 131 chr3L 9693602 intron CG6767 - chr3L 9693668 intron CG6767 - chr3L 9693733 intron CG6767 - chr3L_5_9690001 chr3L_9690001 RAL-908 1373 chr3L 9924911 9924952 chr3L 9925016 9925057 10 105 4.5 3.5 4.0 2.0 146 chr3L 9924911 intron CG34356 + chr3L 9924984 intron CG34356 + chr3L 9925057 intron CG34356 + chr3L_10_9920001 chr3L_9920001 RAL-908 1374 chr3L 9929650 9929680 chr3L 9938450 9938480 roo 6 8800 5.5 3.5 4.5 1.1 8830 chr3L 9929650 intron CG34356 + chr3L 9934065 intron CG34356 + chr3L 9938480 intron CG34356 + chr3L_6_9930001 chr3L_9930001 RAL-908 1375 chr3L 9951178 9951228 chr3L 9951285 9951335 11 105 3.0 3.0 3.0 2.8 157 chr3L 9951178 intron CG34356 + chr3L 9951256 intron CG34356 + chr3L 9951335 intron CG34356 + chr3L_11_9950001 chr3L_9950001 RAL-908 1376 chr3L 9976957 9976988 chr3L 9977041 9977089 5 98 0.0 2.0 1.0 2.5 132 chr3L 9976957 intron dpr6 + chr3L 9977023 intron dpr6 + chr3L 9977089 intron dpr6 + chr3L_5_9975001 chr3L_9975001 RAL-908 1377 chr3L 10014261 10014295 chr3L 10014429 10014463 5 168 3.0 2.5 2.8 1.3 202 chr3L 10014261 intron dpr6 + chr3L 10014362 intron dpr6 + chr3L 10014463 intron dpr6 + chr3L_5_10010001 chr3L_10010001 RAL-908 1378 chr3L 10155111 10155147 chr3L 10155420 10155456 8 308 2.5 3.5 3.0 2.0 345 chr3L 10155111 intron dpr10 - chr3L 10155284 intron dpr10 - chr3L 10155456 intron dpr10 - chr3L_8_10155001 chr3L_10155001 RAL-908 1379 chr3L 10186662 10186691 chr3L 10186771 10186779 5 105 5.5 0.0 2.8 1.3 117 chr3L 10186662 intergenic not near genes chr3L 10186720 intergenic not near genes chr3L 10186779 intergenic not near genes chr3L_5_10185001 chr3L_10185001 RAL-908 1380 chr3L 10211296 10211332 chr3L 10211397 10211433 8 100 1.5 1.0 1.2 3.6 137 chr3L 10211296 intergenic not near genes chr3L 10211364 intergenic not near genes chr3L 10211433 intergenic not near genes chr3L_8_10210001 chr3L_10210001 RAL-908 1381 chr3L 10214716 10214765 chr3L 10214823 10214921 4 131 2.5 0.0 1.2 1.8 205 chr3L 10214716 intergenic not near genes chr3L 10214818 intergenic not near genes chr3L 10214921 intergenic not near genes chr3L_4_10210001 chr3L_10210001 RAL-908 1382 chr3L 10222751 10222776 chr3L 10222851 10222876 11 99 2.0 5.0 3.5 2.4 125 chr3L 10222751 intron scramb1 - chr3L 10222814 intron scramb1 - chr3L 10222876 intron scramb1 - chr3L_11_10220001 chr3L_10220001 RAL-908 1383 chr3L 10255364 10255403 chr3L 10255482 10255521 8 118 0.0 2.5 1.2 3.6 157 chr3L 10255364 intergenic not near genes chr3L 10255442 intergenic not near genes chr3L 10255521 intergenic not near genes chr3L_8_10255001 chr3L_10255001 RAL-908 1384 chr3L 10261618 10261659 chr3L 10261793 10261834 11 173 0.0 1.0 0.5 7.3 216 chr3L 10261618 intergenic not near genes chr3L 10261726 intergenic not near genes chr3L 10261834 intergenic not near genes chr3L_11_10260001 chr3L_10260001 RAL-908 1385 chr3L 10298652 10298701 chr3L 10298759 10298808 13 107 0.0 1.0 0.5 8.7 156 chr3L 10298652 intergenic not near genes chr3L 10298730 intergenic not near genes chr3L 10298808 intergenic not near genes chr3L_13_10295001 chr3L_10295001 RAL-908 1386 chr3L 10300036 10300072 chr3L 10300147 10300184 9 112 2.5 3.5 3.0 2.2 148 chr3L 10300036 intergenic not near genes chr3L 10300110 intergenic not near genes chr3L 10300184 intergenic not near genes chr3L_9_10300001 chr3L_10300001 RAL-908 1387 chr3L 10308729 10308768 chr3L 10308819 10308865 15 96 1.0 3.0 2.0 5.0 136 chr3L 10308729 intergenic not near genes chr3L 10308797 intergenic not near genes chr3L 10308865 intergenic not near genes chr3L_15_10305001 chr3L_10305001 RAL-908 1388 chr3L 10328095 10328129 chr3L 10328227 10328261 12 132 10.5 6.5 8.5 1.3 166 chr3L 10328095 intergenic not near genes chr3L 10328178 intergenic not near genes chr3L 10328261 intergenic not near genes chr3L_12_10325001 chr3L_10325001 RAL-908 1389 chr3L 10386369 10386413 chr3L 10386466 10386510 12 96 3.5 4.0 3.8 2.5 141 chr3L 10386369 intergenic CR45245 + chr3L 10386440 intergenic CR45245 + chr3L 10386510 5` UTR CR45245 + chr3L_12_10385001 chr3L_10385001 RAL-908 1390 chr3L 10414937 10414970 chr3L 10417329 10417362 Doc 10 2391 0.0 3.0 1.5 4.0 2425 chr3L 10414937 intergenic CG12362 + chr3L 10416150 intergenic not near genes chr3L 10417362 intergenic not near genes chr3L_10_10415001 chr3L_10415001 RAL-908 1391 chr3L 10469921 10469960 chr3L 10470017 10470056 9 96 4.0 0.5 2.2 2.8 135 chr3L 10469921 intergenic not near genes chr3L 10469988 intergenic not near genes chr3L 10470056 intergenic not near genes chr3L_9_10465001 chr3L_10465001 RAL-908 1392 chr3L 10509464 10509496 chr3L 10509613 10509640 6 148 4.0 0.5 2.2 1.9 176 chr3L 10509464 intron A2bp1 + chr3L 10509552 intron A2bp1 + chr3L 10509640 intron A2bp1 + chr3L_6_10505001 chr3L_10505001 RAL-908 1393 chr3L 10536100 10536114 chr3L 10536197 10536211 6 97 8.0 4.0 6.0 0.9 111 chr3L 10536100 intron A2bp1 + chr3L 10536156 intron A2bp1 + chr3L 10536211 intron A2bp1 + chr3L_6_10535001 chr3L_10535001 RAL-908 1394 chr3L 10537210 10537248 chr3L 10537306 10537342 16 95 0.5 5.0 2.8 4.2 132 chr3L 10537210 intron A2bp1 + chr3L 10537276 intron A2bp1 + chr3L 10537342 intron A2bp1 + chr3L_16_10535001 chr3L_10535001 RAL-908 1395 chr3L 10584261 10584300 chr3L 10584368 10584407 16 106 6.0 5.0 5.5 2.5 146 chr3L 10584261 intron A2bp1 + chr3L 10584334 intron A2bp1 + chr3L 10584407 intron A2bp1 + chr3L_16_10580001 chr3L_10580001 RAL-908 1396 chr3L 10612900 10612942 chr3L 10613146 10613188 9 246 2.5 1.5 2.0 3.0 288 chr3L 10612900 intergenic not near genes chr3L 10613044 intergenic not near genes chr3L 10613188 intergenic not near genes chr3L_9_10610001 chr3L_10610001 RAL-908 1397 chr3L 10614749 10614798 chr3L 10614856 10614897 8 103 0.0 5.0 2.5 2.3 148 chr3L 10614749 intergenic not near genes chr3L 10614823 intergenic not near genes chr3L 10614897 intergenic not near genes chr3L_8_10610001 chr3L_10610001 RAL-908 1398 chr3L 10621829 10621879 chr3L 10621934 10621981 14 104 5.0 2.0 3.5 3.1 152 chr3L 10621829 intergenic not near genes chr3L 10621905 intergenic not near genes chr3L 10621981 intergenic not near genes chr3L_14_10620001 chr3L_10620001 RAL-908 1399 chr3L 10658058 10658212 chr3L 10658155 10658359 22 119 0.0 0.0 0.0 22.0 301 chr3L 10658058 intron CG32066 - chr3L 10658208 intron CG32066 - chr3L 10658359 intron CG32066 - chr3L_22_10655001 chr3L_10655001 RAL-908 1400 chr3L 10694905 10694934 chr3L 10695011 10695046 15 111 1.5 3.5 2.5 4.3 141 chr3L 10694905 intron NijA - chr3L 10694976 intron NijA - chr3L 10695046 exon NijA - chr3L_15_10690001 chr3L_10690001 RAL-908 1401 chr3L 10696364 10696409 chr3L 10696468 10696513 14 102 3.0 5.0 4.0 2.8 149 chr3L 10696364 intron NijA - chr3L 10696438 intron NijA - chr3L 10696513 intron NijA - chr3L_14_10695001 chr3L_10695001 RAL-908 1402 chr3L 10818486 10818519 chr3L 10818586 10818619 14 100 3.5 6.5 5.0 2.3 133 chr3L 10818486 intergenic not near genes chr3L 10818552 intergenic not near genes chr3L 10818619 intergenic not near genes chr3L_14_10815001 chr3L_10815001 RAL-908 1403 chr3L 10820490 10820512 chr3L 10820650 10820661 5 161 2.0 0.0 1.0 2.5 171 chr3L 10820490 intergenic not near genes chr3L 10820576 intergenic not near genes chr3L 10820661 intergenic not near genes chr3L_5_10820001 chr3L_10820001 RAL-908 1404 chr3L 10887364 10887378 chr3L 10887463 10887477 6 99 0.0 9.5 4.8 1.0 113 chr3L 10887364 intergenic not near genes chr3L 10887420 intergenic not near genes chr3L 10887477 intergenic not near genes chr3L_6_10885001 chr3L_10885001 RAL-908 1405 chr3L 10942052 10942065 chr3L 10942142 10942168 5 96 5.0 4.5 4.8 0.9 116 chr3L 10942052 intergenic not near genes chr3L 10942110 intergenic not near genes chr3L 10942168 intergenic not near genes chr3L_5_10940001 chr3L_10940001 RAL-908 1406 chr3L 10956431 10956469 chr3L 10956569 10956574 10 134 2.5 1.5 2.0 3.3 143 chr3L 10956431 intergenic not near genes chr3L 10956502 intergenic not near genes chr3L 10956574 intergenic not near genes chr3L_10_10955001 chr3L_10955001 RAL-908 1407 chr3L 10956993 10957031 chr3L 10957089 10957127 7 86 3.5 4.5 4.0 1.4 134 chr3L 10956993 intergenic not near genes chr3L 10957060 intergenic not near genes chr3L 10957127 intergenic not near genes chr3L_7_10955001 chr3L_10955001 RAL-908 1408 chr3L 10958191 10958230 chr3L 10958293 10958332 6 102 3.5 0.0 1.8 2.1 141 chr3L 10958191 intergenic not near genes chr3L 10958262 intergenic not near genes chr3L 10958332 intergenic not near genes chr3L_6_10955001 chr3L_10955001 RAL-908 1409 chr3L 11052318 11052359 chr3L 11052416 11052457 9 95 2.0 3.5 2.8 2.4 139 chr3L 11052318 intergenic not near genes chr3L 11052388 intergenic not near genes chr3L 11052457 intergenic not near genes chr3L_9_11050001 chr3L_11050001 RAL-908 1410 chr3L 11087047 11087087 chr3L 11088854 11088896 S-element 4 1804 2.5 2.0 2.2 1.2 1849 chr3L 11087047 intron JIL-1 - chr3L 11087972 intron JIL-1 - chr3L 11088896 intron JIL-1 - chr3L_4_11085001 chr3L_11085001 RAL-908 1411 chr3L 11089349 11089396 chr3L 11089486 11089547 12 142 4.0 0.0 2.0 4.0 198 chr3L 11089349 intron JIL-1 - chr3L 11089448 intron JIL-1 - chr3L 11089547 intron JIL-1 - chr3L_12_11085001 chr3L_11085001 RAL-908 1412 chr3L 11135509 11135796 chr3L 11135759 11135873 18 160 0.0 0.0 0.0 18.0 364 chr3L 11135509 intergenic CG14143 + chr3L 11135691 intergenic CG14143 +,CG32082 + chr3L 11135873 intergenic CG32082 +,CG14143 + chr3L_18_11135001 chr3L_11135001 RAL-908 1413 chr3L 11264457 11264492 chr3L 11271416 11271464 17.6 8 6970 2.0 1.0 1.5 3.2 7007 chr3L 11264457 intergenic not near genes chr3L 11267960 intergenic not near genes chr3L 11271464 intergenic not near genes chr3L_8_11265001 chr3L_11265001 RAL-908 1414 chr3L 11271771 11271808 chr3L 11272068 11272105 9 294 6.0 5.0 5.5 1.4 334 chr3L 11271771 intergenic not near genes chr3L 11271938 intergenic not near genes chr3L 11272105 intergenic not near genes chr3L_9_11270001 chr3L_11270001 RAL-908 1415 chr3L 11290604 11290653 chr3L 11290947 11290996 14 343 2.0 5.0 3.5 3.1 392 chr3L 11290604 intron CG6175 - chr3L 11290800 intron CG6175 - chr3L 11290996 intron CG6175 - chr3L_14_11290001 chr3L_11290001 RAL-908 1416 chr3L 11329682 11329728 chr3L 11332907 11332942 jockey 6 3223 4.0 6.0 5.0 1.0 3260 chr3L 11329682 intergenic not near genes chr3L 11331312 intergenic not near genes chr3L 11332942 intergenic not near genes chr3L_6_11330001 chr3L_11330001 RAL-908 1417 chr3L 11432888 11432901 chr3L 11432987 11432988 6 97 0.5 0.5 0.5 4.0 100 chr3L 11432888 intergenic not near genes chr3L 11432938 intergenic not near genes chr3L 11432988 intergenic not near genes chr3L_6_11430001 chr3L_11430001 RAL-908 1418 chr3L 11432902 11432939 chr3L 11432984 11433038 11 96 0.5 0.5 0.5 7.3 136 chr3L 11432902 intergenic not near genes chr3L 11432970 intergenic not near genes chr3L 11433038 intergenic not near genes chr3L_11_11430001 chr3L_11430001 RAL-908 1419 chr3L 11435547 11435569 chr3L 11435736 11435758 7 189 4.0 3.5 3.8 1.5 211 chr3L 11435547 intergenic CG6149 -,CR44548 + chr3L 11435652 5` UTR CR44548 + chr3L 11435758 5` UTR CR44548 + chr3L_7_11435001 chr3L_11435001 RAL-908 1420 chr3L 11474616 11474645 chr3L 11474725 11474754 12 109 4.5 1.0 2.8 3.2 138 chr3L 11474616 intergenic Vha16-2 + chr3L 11474685 intergenic Vha16-2 + chr3L 11474754 intergenic Vha16-2 + chr3L_12_11470001 chr3L_11470001 RAL-908 1421 chr3L 11534806 11534823 chr3L 11534916 11534933 4 110 4.5 1.5 3.0 1.0 127 chr3L 11534806 intron Mob2 - chr3L 11534870 intron Mob2 - chr3L 11534933 intron Mob2 - chr3L_4_11530001 chr3L_11530001 RAL-908 1422 chr3L 11534840 11534851 chr3L 11534915 11534961 4 94 2.5 1.5 2.0 1.3 121 chr3L 11534840 intron Mob2 - chr3L 11534900 intron Mob2 - chr3L 11534961 intron Mob2 - chr3L_4_11530001 chr3L_11530001 RAL-908 1423 chr3L 11546262 11546312 chr3L 11546390 11546440 10 128 2.5 6.5 4.5 1.8 178 chr3L 11546262 intron Mob2 - chr3L 11546351 intron Mob2 - chr3L 11546440 intron Mob2 - chr3L_10_11545001 chr3L_11545001 RAL-908 1424 chr3L 11579539 11579584 chr3L 11579665 11579710 13 126 3.5 2.5 3.0 3.2 171 chr3L 11579539 intergenic CG43390 - chr3L 11579624 intergenic CG43390 - chr3L 11579710 intergenic CG43390 - chr3L_13_11575001 chr3L_11575001 RAL-908 1425 chr3L 11590250 11590271 chr3L 11590360 11590381 9 110 5.5 4.5 5.0 1.5 131 chr3L 11590250 intergenic CG7377 + chr3L 11590316 intergenic CG7377 + chr3L 11590381 intergenic CG7377 +,CG33268 - chr3L_9_11590001 chr3L_11590001 RAL-908 1426 chr3L 11678079 11678123 chr3L 11678186 11678230 10 107 2.0 5.0 3.5 2.2 151 chr3L 11678079 intron CG32085 - chr3L 11678154 intron CG32085 - chr3L 11678230 intron CG32085 - chr3L_10_11675001 chr3L_11675001 RAL-908 1427 chr3L 11723067 11723112 chr3L 11727882 11727927 Doc 12 4815 6.5 7.0 6.8 1.5 4860 chr3L 11723067 3` UTR Bmcp + chr3L 11725497 intron Bmcp + chr3L 11727927 3` UTR Bmcp + chr3L_12_11725001 chr3L_11725001 RAL-908 1428 chr3L 11729656 11729702 chr3L 11729752 11729798 7 96 4.0 2.5 3.2 1.7 142 chr3L 11729656 exon CG32088 + chr3L 11729727 intron CG32088 + chr3L 11729798 exon CG32088 + chr3L_7_11725001 chr3L_11725001 RAL-908 1429 chr3L 11743997 11744022 chr3L 11744125 11744149 6 128 4.5 1.0 2.8 1.6 152 chr3L 11743997 exon CG6024 - chr3L 11744073 intron CG6024 - chr3L 11744149 intron CG6024 - chr3L_6_11740001 chr3L_11740001 RAL-908 1430 chr3L 11746653 11746679 chr3L 11746752 11746778 4 99 1.0 2.5 1.8 1.4 125 chr3L 11746653 intron CG6024 - chr3L 11746716 intron CG6024 - chr3L 11746778 intron CG6024 - chr3L_4_11745001 chr3L_11745001 RAL-908 1431 chr3L 7749470 7749471 chr3L 11777678 11777678 7 4028207 11.0 6.5 8.8 0.7 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_7_9760001 chr3L_9760001 RAL-908 1432 chr3L 11777678 11777678 chr3L 12163305 12163305 4 385627 9.0 11.0 10.0 0.4 385627 chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L 11970492 exon Muc68E - chr3L 12163305 intron CG9760 - chr3L_4_11970001 chr3L_11970001 RAL-908 1433 chr3L 11840142 11840187 chr3L 11840355 11840401 14 211 3.0 3.5 3.2 3.3 259 chr3L 11840142 intergenic not near genes chr3L 11840272 intergenic not near genes chr3L 11840401 intergenic not near genes chr3L_14_11840001 chr3L_11840001 RAL-908 1434 chr3L 11846400 11846417 chr3L 11846528 11846545 6 127 0.5 6.5 3.5 1.3 145 chr3L 11846400 intergenic not near genes chr3L 11846472 intergenic not near genes chr3L 11846545 intergenic not near genes chr3L_6_11845001 chr3L_11845001 RAL-908 1435 chr3L 11847122 11847167 chr3L 11847232 11847277 9 110 1.0 0.0 0.5 6.0 155 chr3L 11847122 intergenic CG12521 - chr3L 11847200 intergenic CG12521 - chr3L 11847277 intergenic CG12521 - chr3L_9_11845001 chr3L_11845001 RAL-908 1436 chr3L 11887243 11887269 chr3L 11887360 11887386 6 117 5.5 0.0 2.8 1.6 143 chr3L 11887243 intron CG44837 - chr3L 11887314 intron,3` UTR CG44837 -,CG5897 - chr3L 11887386 intron,3` UTR CG44837 -,CG5897 - chr3L_6_11885001 chr3L_11885001 RAL-908 1437 chr3L 11974318 11974320 chr3L 11974418 11974420 4 100 14.5 4.5 9.5 0.4 102 chr3L 11974318 intergenic not near genes chr3L 11974369 intergenic not near genes chr3L 11974420 intergenic CG14125 + chr3L_4_11970001 chr3L_11970001 RAL-908 1438 chr3L 11974322 11974362 chr3L 11974413 11974460 16 99 4.0 3.5 3.8 3.3 138 chr3L 11974322 intergenic not near genes chr3L 11974391 intergenic not near genes chr3L 11974460 intergenic CG14125 + chr3L_16_11970001 chr3L_11970001 RAL-908 1439 chr3L 12013902 12013937 chr3L 12014003 12014048 9 110 3.0 1.5 2.2 2.8 146 chr3L 12013902 intron rols - chr3L 12013975 intron rols - chr3L 12014048 intron rols - chr3L_9_12010001 chr3L_12010001 RAL-908 1440 chr3L 12033692 12033696 chr3L 12033825 12033829 4 133 0.0 9.5 4.8 0.7 137 chr3L 12033692 intron rols - chr3L 12033760 intron rols - chr3L 12033829 intron rols - chr3L_4_12030001 chr3L_12030001 RAL-908 1441 chr3L 12039611 12039656 chr3L 12039721 12039766 19 108 5.0 0.0 2.5 5.4 155 chr3L 12039611 intron rols - chr3L 12039688 intron rols - chr3L 12039766 intron rols - chr3L_19_12035001 chr3L_12035001 RAL-908 1442 chr3L 12049275 12049313 chr3L 12049586 12049626 5 311 5.0 3.5 4.2 1.0 351 chr3L 12049275 intron rols - chr3L 12049450 intron rols - chr3L 12049626 intron rols - chr3L_5_12045001 chr3L_12045001 RAL-908 1443 chr3L 12075405 12075460 chr3L 12075514 12075564 11 106 0.5 0.0 0.2 9.2 159 chr3L 12075405 intron Sema-5c - chr3L 12075484 intron Sema-5c - chr3L 12075564 intron Sema-5c - chr3L_11_12075001 chr3L_12075001 RAL-908 1444 chr3L 12110191 12110246 chr3L 12110291 12110331 9 95 2.0 1.5 1.8 3.2 140 chr3L 12110191 intergenic not near genes chr3L 12110261 intergenic not near genes chr3L 12110331 intergenic not near genes chr3L_9_12110001 chr3L_12110001 RAL-908 1445 chr3L 12131849 12131854 chr3L 12131978 12131983 4 129 15.5 0.0 7.8 0.5 134 chr3L 12131849 3` UTR Lsp2 + chr3L 12131916 intergenic Lsp2 +,CG11534 + chr3L 12131983 intergenic Lsp2 +,CG11534 + chr3L_4_12130001 chr3L_12130001 RAL-908 1446 chr3L 12170772 12170812 chr3L 12170874 12170914 5 102 2.0 4.0 3.0 1.2 142 chr3L 12170772 intron Rh7 - chr3L 12170843 intron Rh7 - chr3L 12170914 intron Rh7 - chr3L_5_12170001 chr3L_12170001 RAL-908 1447 chr3L 12310909 12310951 chr3L 12311026 12311068 16 117 2.5 1.5 2.0 5.3 159 chr3L 12310909 5` UTR CG44355 + chr3L 12310988 intron CG44355 + chr3L 12311068 exon CG44355 + chr3L_16_12310001 chr3L_12310001 RAL-908 1448 chr3L 12369521 12369554 chr3L 12369627 12369664 10 110 6.5 3.0 4.8 1.7 143 chr3L 12369521 intron Ncc69 - chr3L 12369592 intron Ncc69 - chr3L 12369664 intron Ncc69 - chr3L_10_12365001 chr3L_12365001 RAL-908 1449 chr3L 12412901 12412925 chr3L 12413003 12413027 6 102 2.0 2.5 2.2 1.9 126 chr3L 12412901 intron CG32103 - chr3L 12412964 intron CG32103 - chr3L 12413027 intron CG32103 - chr3L_6_12410001 chr3L_12410001 RAL-908 1450 chr3L 12434877 12434916 chr3L 12435061 12435105 16 189 0.0 2.5 1.2 7.3 228 chr3L 12434877 intergenic not near genes chr3L 12434991 intergenic not near genes chr3L 12435105 intergenic not near genes chr3L_16_12430001 chr3L_12430001 RAL-908 1451 chr3L 12446260 12446296 chr3L 12446349 12446394 4 92 2.5 0.5 1.5 1.6 134 chr3L 12446260 intergenic not near genes chr3L 12446327 intergenic not near genes chr3L 12446394 intergenic not near genes chr3L_4_12445001 chr3L_12445001 RAL-908 1452 chr3L 12467234 12467278 chr3L 12467339 12467383 12 104 0.5 5.0 2.8 3.2 149 chr3L 12467234 intron eyg - chr3L 12467308 intron eyg - chr3L 12467383 intron eyg - chr3L_12_12465001 chr3L_12465001 RAL-908 1453 chr3L 12491705 12491711 chr3L 12491792 12491814 4 96 0.0 4.5 2.2 1.2 109 chr3L 12491705 intergenic CG10657 -,CR45682 + chr3L 12491760 intergenic CG10657 -,CR45682 + chr3L 12491814 intergenic CG10657 -,CR45682 + chr3L_4_12490001 chr3L_12490001 RAL-908 1454 chr3L 12518276 12518329 chr3L 12518375 12518417 15 96 2.5 4.0 3.2 3.6 141 chr3L 12518276 intron tral + chr3L 12518346 intron tral + chr3L 12518417 intron tral + chr3L_15_12515001 chr3L_12515001 RAL-908 1455 chr3L 12578048 12578081 chr3L 12578156 12578171 7 105 1.5 0.0 0.8 3.9 123 chr3L 12578048 intergenic not near genes chr3L 12578110 intergenic not near genes chr3L 12578171 intergenic not near genes chr3L_7_12575001 chr3L_12575001 RAL-908 1456 chr3L 12587334 12587382 chr3L 12587432 12587485 14 103 0.0 0.0 0.0 14.0 151 chr3L 12587334 intron ara + chr3L 12587410 intron ara + chr3L 12587485 intron ara + chr3L_14_12585001 chr3L_12585001 RAL-908 1457 chr3L 12626151 12626174 chr3L 12626280 12626303 5 126 3.5 0.0 1.8 1.8 152 chr3L 12626151 intergenic not near genes chr3L 12626227 intergenic not near genes chr3L 12626303 intergenic not near genes chr3L_5_12625001 chr3L_12625001 RAL-908 1458 chr3L 12628475 12628525 chr3L 12628587 12628637 7 112 0.0 3.5 1.8 2.5 162 chr3L 12628475 intron CR32111 + chr3L 12628556 intron CR32111 + chr3L 12628637 intron CR32111 + chr3L_7_12625001 chr3L_12625001 RAL-908 1459 chr3L 12646089 12646134 chr3L 12646187 12646232 17 97 2.0 5.5 3.8 3.5 143 chr3L 12646089 5` UTR CR32111 + chr3L 12646160 5` UTR CR32111 + chr3L 12646232 5` UTR CR32111 + chr3L_17_12645001 chr3L_12645001 RAL-908 1460 chr3L 12717698 12717699 chr3L 12717791 12717797 4 97 0.0 2.5 1.2 1.8 99 chr3L 12717698 intergenic not near genes chr3L 12717748 intergenic not near genes chr3L 12717797 intergenic not near genes chr3L_4_12715001 chr3L_12715001 RAL-908 1461 chr3L 12720310 12720349 chr3L 12720415 12720454 10 105 4.5 3.5 4.0 2.0 144 chr3L 12720310 intergenic not near genes chr3L 12720382 intergenic not near genes chr3L 12720454 intergenic not near genes chr3L_10_12720001 chr3L_12720001 RAL-908 1462 chr3L 12728016 12728041 chr3L 12728120 12728145 5 103 3.0 8.5 5.8 0.7 129 chr3L 12728016 intergenic not near genes chr3L 12728080 intergenic not near genes chr3L 12728145 intergenic not near genes chr3L_5_12725001 chr3L_12725001 RAL-908 1463 chr3L 12799819 12799827 chr3L 12799947 12799955 4 128 5.0 9.5 7.2 0.5 136 chr3L 12799819 intron Atg1 - chr3L 12799887 intron Atg1 - chr3L 12799955 intron Atg1 - chr3L_4_12795001 chr3L_12795001 RAL-908 1464 chr3L 12801966 12802005 chr3L 12802055 12802101 10 93 3.0 5.5 4.2 1.9 135 chr3L 12801966 intron Atg1 - chr3L 12802034 intron Atg1 - chr3L 12802101 intron Atg1 - chr3L_10_12800001 chr3L_12800001 RAL-908 1465 chr3L 12874908 12874955 chr3L 12877220 12877267 jockey 16 2311 2.5 4.0 3.2 3.8 2359 chr3L 12874908 intergenic not near genes chr3L 12876088 intergenic not near genes chr3L 12877267 intergenic not near genes chr3L_16_12875001 chr3L_12875001 RAL-908 1466 chr3L 12894785 12894813 chr3L 12894883 12894911 5 98 9.5 6.5 8.0 0.6 126 chr3L 12894785 intergenic CG14118 + chr3L 12894848 intergenic CG14118 + chr3L 12894911 intergenic CG14118 + chr3L_5_12890001 chr3L_12890001 RAL-908 1467 chr3L 12957776 12957796 chr3L 12962278 12962298 copia 7 4502 7.0 5.0 6.0 1.0 4522 chr3L 12957776 intergenic not near genes chr3L 12960037 intergenic not near genes chr3L 12962298 intergenic not near genes chr3L_7_12960001 chr3L_12960001 RAL-908 1468 chr3L 12957799 12957817 chr3L 12962276 12962312 copia 7 4497 5.0 4.5 4.8 1.2 4513 chr3L 12957799 intergenic not near genes chr3L 12960056 intergenic not near genes chr3L 12962312 intergenic not near genes chr3L_7_12960001 chr3L_12960001 RAL-908 1469 chr3L 12967113 12967156 chr3L 12967217 12967260 13 103 5.0 4.0 4.5 2.4 147 chr3L 12967113 exon Or69a - chr3L 12967186 exon Or69a - chr3L 12967260 exon Or69a - chr3L_13_12965001 chr3L_12965001 RAL-908 1470 chr3L 13050548 13050588 chr3L 13050647 13050687 12 98 5.5 3.0 4.2 2.3 139 chr3L 13050548 intergenic not near genes chr3L 13050618 intergenic not near genes chr3L 13050687 intergenic not near genes chr3L_12_13050001 chr3L_13050001 RAL-908 1471 chr3L 13144100 13144121 chr3L 13144197 13144218 6 97 9.5 2.5 6.0 0.9 118 chr3L 13144100 intergenic not near genes chr3L 13144159 intergenic not near genes chr3L 13144218 intergenic not near genes chr3L_6_13140001 chr3L_13140001 RAL-908 1472 chr3L 13148642 13148691 chr3L 13148738 13148787 6 94 3.0 1.5 2.2 1.9 145 chr3L 13148642 intergenic not near genes chr3L 13148714 intergenic not near genes chr3L 13148787 intergenic not near genes chr3L_6_13145001 chr3L_13145001 RAL-908 1473 chr3L 13223204 13223233 chr3L 13223301 13223330 4 97 4.0 9.5 6.8 0.5 126 chr3L 13223204 intergenic not near genes chr3L 13223267 intergenic not near genes chr3L 13223330 intergenic not near genes chr3L_4_13220001 chr3L_13220001 RAL-908 1474 chr3L 13267274 13267315 chr3L 13267402 13267446 7 132 2.5 2.5 2.5 2.0 172 chr3L 13267274 intron caps + chr3L 13267360 intron caps + chr3L 13267446 intron caps + chr3L_7_13265001 chr3L_13265001 RAL-908 1475 chr3L 13315944 13315953 chr3L 13316228 13316237 4 284 0.0 16.0 8.0 0.4 293 chr3L 13315944 intergenic not near genes chr3L 13316090 intergenic not near genes chr3L 13316237 intergenic not near genes chr3L_4_13315001 chr3L_13315001 RAL-908 1476 chr3L 13345981 13346012 chr3L 13627468 13627499 4 281487 5.5 13.5 9.5 0.4 281518 chr3L 13345981 intergenic not near genes chr3L 13486740 intergenic Tgi +,Abp1 - chr3L 13627499 intron bru-3 - chr3L_4_13485001 chr3L_13485001 RAL-908 1477 chr3L 13452654 13452685 chr3L 13452762 13452793 13 108 0.5 6.0 3.2 3.1 139 chr3L 13452654 intron CG10738 + chr3L 13452724 intron CG10738 + chr3L 13452793 intron CG10738 + chr3L_13_13450001 chr3L_13450001 RAL-908 1478 chr3L 13477001 13477034 chr3L 13477098 13477129 12 97 0.5 4.0 2.2 3.8 128 chr3L 13477001 intergenic not near genes chr3L 13477065 intergenic stv + chr3L 13477129 intergenic stv + chr3L_12_13475001 chr3L_13475001 RAL-908 1479 chr3L 13525141 13525178 chr3L 13532957 13532994 roo 7 7816 5.5 8.0 6.8 0.9 7853 chr3L 13525141 intergenic not near genes chr3L 13529068 intergenic not near genes chr3L 13532994 intergenic not near genes chr3L_7_13525001 chr3L_13525001 RAL-908 1480 chr3L 13595007 13595041 chr3L 13595107 13595141 8 96 0.5 2.0 1.2 3.6 134 chr3L 13595007 intron bru-3 - chr3L 13595074 intron bru-3 - chr3L 13595141 intron bru-3 - chr3L_8_13595001 chr3L_13595001 RAL-908 1481 chr3L 13629514 13629546 chr3L 13629642 13629675 8 129 5.0 2.0 3.5 1.8 161 chr3L 13629514 intron bru-3 - chr3L 13629594 intron bru-3 - chr3L 13629675 intron bru-3 - chr3L_8_13625001 chr3L_13625001 RAL-908 1482 chr3L 13804527 13804565 chr3L 13822833 13822871 roo 10 18306 6.5 2.0 4.2 1.9 18344 chr3L 13804527 intergenic not near genes chr3L 13813699 intergenic not near genes chr3L 13822871 intergenic not near genes chr3L_10_13810001 chr3L_13810001 RAL-908 1483 chr3L 13884359 13884384 chr3L 13884470 13884495 11 111 8.0 2.5 5.2 1.8 136 chr3L 13884359 intron dysc - chr3L 13884427 intron dysc - chr3L 13884495 intron dysc - chr3L_11_13880001 chr3L_13880001 RAL-908 1484 chr3L 13920399 13920431 chr3L 13920499 13920531 16 100 2.5 3.5 3.0 4.0 132 chr3L 13920399 intron Rgl - chr3L 13920465 intron Rgl - chr3L 13920531 intron Rgl - chr3L_16_13920001 chr3L_13920001 RAL-908 1485 chr3L 13936634 13936646 chr3L 13936788 13936800 6 154 4.0 1.5 2.8 1.6 166 chr3L 13936634 intergenic not near genes chr3L 13936717 intergenic not near genes chr3L 13936800 intergenic not near genes chr3L_6_13935001 chr3L_13935001 RAL-908 1486 chr3L 14061644 14061691 chr3L 14061753 14061797 7 107 3.5 0.5 2.0 2.3 153 chr3L 14061644 intron CG32138 + chr3L 14061720 intron CG32138 + chr3L 14061797 intron CG32138 + chr3L_7_14060001 chr3L_14060001 RAL-908 1487 chr3L 14076282 14076312 chr3L 14076380 14076410 11 97 0.0 1.5 0.8 6.1 128 chr3L 14076282 intron btl + chr3L 14076346 intron btl + chr3L 14076410 intron btl + chr3L_11_14075001 chr3L_14075001 RAL-908 1488 chr3L 14092722 14092739 chr3L 14092825 14092842 5 103 6.5 1.5 4.0 1.0 120 chr3L 14092722 intergenic not near genes chr3L 14092782 intergenic not near genes chr3L 14092842 intergenic not near genes chr3L_5_14090001 chr3L_14090001 RAL-908 1489 chr3L 14141391 14141411 chr3L 14141498 14141517 8 107 3.5 0.0 1.8 2.9 126 chr3L 14141391 intergenic not near genes chr3L 14141454 intergenic not near genes chr3L 14141517 intergenic not near genes chr3L_8_14140001 chr3L_14140001 RAL-908 1490 chr3L 14185147 14185181 chr3L 14185243 14185276 8 93 3.5 4.5 4.0 1.6 129 chr3L 14185147 intergenic not near genes chr3L 14185212 intergenic not near genes chr3L 14185276 intergenic not near genes chr3L_8_14185001 chr3L_14185001 RAL-908 1491 chr3L 14194706 14194710 chr3L 14194802 14194806 5 96 11.5 2.5 7.0 0.6 100 chr3L 14194706 intron nuf + chr3L 14194756 intron nuf + chr3L 14194806 intron nuf + chr3L_5_14190001 chr3L_14190001 RAL-908 1492 chr3L 14194713 14194742 chr3L 14194799 14194838 10 95 4.0 2.5 3.2 2.4 125 chr3L 14194713 intron nuf + chr3L 14194776 intron nuf + chr3L 14194838 intron nuf + chr3L_10_14190001 chr3L_14190001 RAL-908 1493 chr3L 14245551 14245594 chr3L 14245665 14245698 1360 14 113 4.0 2.0 3.0 3.5 147 chr3L 14245551 3` UTR CR44561 - chr3L 14245624 3` UTR CR44561 - chr3L 14245698 intergenic CR44561 -,CR44560 + chr3L_14_14245001 chr3L_14245001 RAL-908 1494 chr3L 14267392 14267398 chr3L 14271824 14271830 F-element 4 4432 2.5 0.0 1.2 1.8 4438 chr3L 14267392 intergenic not near genes chr3L 14269611 intergenic not near genes chr3L 14271830 intergenic not near genes chr3L_4_14265001 chr3L_14265001 RAL-908 1495 chr3L 14267399 14267406 chr3L 14271821 14271838 F-element 4 4429 2.5 0.0 1.2 1.8 4439 chr3L 14267399 intergenic not near genes chr3L 14269618 intergenic not near genes chr3L 14271838 intergenic not near genes chr3L_4_14265001 chr3L_14265001 RAL-908 1496 chr3L 14282578 14282596 chr3L 14282678 14282684 5 98 7.5 6.5 7.0 0.6 106 chr3L 14282578 intron fz + chr3L 14282631 intron fz + chr3L 14282684 intron fz + chr3L_5_14280001 chr3L_14280001 RAL-908 1497 chr3L 14295970 14296011 chr3L 14296476 14296516 roo 10 506 1.5 7.5 4.5 1.8 546 chr3L 14295970 intron fz + chr3L 14296243 intron fz + chr3L 14296516 intron fz + chr3L_10_14295001 chr3L_14295001 RAL-908 1498 chr3L 14309406 14309427 chr3L 14309519 14309540 5 112 0.5 4.5 2.5 1.4 134 chr3L 14309406 intron fz + chr3L 14309473 intron fz + chr3L 14309540 intron fz + chr3L_5_14305001 chr3L_14305001 RAL-908 1499 chr3L 14312023 14312055 chr3L 14316837 14316837 X-element 9 4824 0.5 3.0 1.8 3.2 4814 chr3L 14312023 exon fz + chr3L 14314430 intron fz + chr3L 14316837 intron fz + chr3L_9_14310001 chr3L_14310001 RAL-908 1500 chr3L 14356507 14356547 chr3L 14356607 14356647 6 100 2.0 2.0 2.0 2.0 140 chr3L 14356507 intron fz + chr3L 14356577 intron fz + chr3L 14356647 intron fz + chr3L_6_14355001 chr3L_14355001 RAL-908 1501 chr3L 14417881 14417933 chr3L 14417977 14418029 23 93 1.5 1.5 1.5 9.2 148 chr3L 14417881 intron bbg - chr3L 14417955 intron bbg - chr3L 14418029 intron bbg - chr3L_23_14415001 chr3L_14415001 RAL-908 1502 chr3L 14440751 14440772 chr3L 14440856 14440877 7 105 1.0 4.5 2.8 1.8 126 chr3L 14440751 intron bbg - chr3L 14440814 intron bbg - chr3L 14440877 intron bbg - chr3L_7_14440001 chr3L_14440001 RAL-908 1503 chr3L 14468435 14468472 chr3L 14473661 14473696 copia 11 5226 3.5 2.5 3.0 2.8 5261 chr3L 14468435 intron bbg - chr3L 14471066 intron bbg - chr3L 14473696 intron bbg - chr3L_11_14470001 chr3L_14470001 RAL-908 1504 chr3L 14522032 14522085 chr3L 14522139 14522192 12 106 4.0 6.5 5.2 1.9 160 chr3L 14522032 intron bbg - chr3L 14522112 intron bbg - chr3L 14522192 intron bbg - chr3L_12_14520001 chr3L_14520001 RAL-908 1505 chr3L 14585590 14585637 chr3L 14585688 14585735 12 98 2.0 3.5 2.8 3.2 145 chr3L 14585590 intron HGTX - chr3L 14585662 intron HGTX - chr3L 14585735 intron HGTX - chr3L_12_14585001 chr3L_14585001 RAL-908 1506 chr3L 14589520 14589546 chr3L 14589627 14589657 7 108 5.0 1.5 3.2 1.7 137 chr3L 14589520 intron HGTX - chr3L 14589588 intron HGTX - chr3L 14589657 intron HGTX - chr3L_7_14585001 chr3L_14585001 RAL-908 1507 chr3L 14711946 14711988 chr3L 14714232 14714274 10 2286 5.0 5.5 5.2 1.6 2328 chr3L 14711946 intron ome + chr3L 14713110 intron ome + chr3L 14714274 intron ome + chr3L_10_14710001 chr3L_14710001 RAL-908 1508 chr3L 14789812 14789859 chr3L 14789910 14789928 12 91 3.5 4.5 4.0 2.4 116 chr3L 14789812 intergenic CG9425 +,Tdrd3 + chr3L 14789870 intergenic CG9425 +,Tdrd3 + chr3L 14789928 intergenic CG9425 +,Tdrd3 + chr3L_12_14785001 chr3L_14785001 RAL-908 1509 chr3L 14825141 14825159 chr3L 14832888 14832895 Stalker2 5 7745 2.5 9.0 5.8 0.7 7754 chr3L 14825141 intron CG17839 + chr3L 14829018 intron CG17839 + chr3L 14832895 intron CG17839 + chr3L_5_14825001 chr3L_14825001 RAL-908 1510 chr3L 14870043 14870078 chr3L 14870139 14870173 13 96 3.5 3.0 3.2 3.1 130 chr3L 14870043 intron CG17839 + chr3L 14870108 intron CG17839 + chr3L 14870173 intron CG17839 + chr3L_13_14870001 chr3L_14870001 RAL-908 1511 chr3L 14893655 14893685 chr3L 14893760 14893770 6 100 3.5 6.0 4.8 1.0 115 chr3L 14893655 intergenic CG34245 - chr3L 14893712 intergenic CG34245 - chr3L 14893770 3` UTR CG34245 - chr3L_6_14890001 chr3L_14890001 RAL-908 1512 chr3L 14913882 14913924 chr3L 14913978 14914021 11 97 5.0 4.5 4.8 1.9 139 chr3L 14913882 intron DCX-EMAP + chr3L 14913952 intron DCX-EMAP + chr3L 14914021 intron DCX-EMAP + chr3L_11_14910001 chr3L_14910001 RAL-908 1513 chr3L 14933426 14933461 chr3L 14933527 14933563 6 102 5.5 5.5 5.5 0.9 137 chr3L 14933426 intron DCX-EMAP + chr3L 14933494 intron DCX-EMAP + chr3L 14933563 intron DCX-EMAP + chr3L_6_14930001 chr3L_14930001 RAL-908 1514 chr3L 14948396 14948528 chr3L 14948505 14948630 15 111 0.0 0.0 0.0 15.0 234 chr3L 14948396 intergenic not near genes chr3L 14948513 intergenic not near genes chr3L 14948630 intergenic not near genes chr3L_15_14945001 chr3L_14945001 RAL-908 1515 chr3L 14954349 14954392 chr3L 14956038 14956081 transib2 14 1687 4.0 2.0 3.0 3.5 1732 chr3L 14954349 intergenic not near genes chr3L 14955215 intergenic not near genes chr3L 14956081 intergenic not near genes chr3L_14_14955001 chr3L_14955001 RAL-908 1516 chr3L 14962267 14962309 chr3L 14962367 14962409 8 100 5.5 1.5 3.5 1.8 142 chr3L 14962267 intergenic not near genes chr3L 14962338 intergenic not near genes chr3L 14962409 intergenic not near genes chr3L_8_14960001 chr3L_14960001 RAL-908 1517 chr3L 14970739 14970762 chr3L 14971069 14971092 F-element 15 330 6.0 8.0 7.0 1.9 353 chr3L 14970739 intergenic Tom + chr3L 14970916 intergenic not near genes chr3L 14971092 intergenic not near genes chr3L_15_14970001 chr3L_14970001 RAL-908 1518 chr3L 15035694 15035746 chr3L 15035800 15035852 14 105 4.5 5.0 4.8 2.4 158 chr3L 15035694 intron Sytbeta - chr3L 15035773 intron Sytbeta - chr3L 15035852 intron Sytbeta - chr3L_14_15035001 chr3L_15035001 RAL-908 1519 chr3L 15085028 15085071 chr3L 15086214 15086256 1360 12 1184 4.0 4.0 4.0 2.4 1228 chr3L 15085028 intron cp309 - chr3L 15085642 intron cp309 - chr3L 15086256 intron cp309 - chr3L_12_15085001 chr3L_15085001 RAL-908 1520 chr3L 15094958 15094963 chr3L 15095067 15095079 5 115 9.0 2.5 5.8 0.7 121 chr3L 15094958 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095018 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095079 intergenic Aats-gly +,cp309 -,CG6945 - chr3L_5_15095001 chr3L_15095001 RAL-908 1521 chr3L 15146169 15146172 chr3L 15146278 15146281 4 109 0.5 18.0 9.2 0.4 112 chr3L 15146169 3` UTR Pex3 + chr3L 15146225 3` UTR Pex3 + chr3L 15146281 3` UTR Pex3 + chr3L_4_15145001 chr3L_15145001 RAL-908 1522 chr3L 15193674 15193725 chr3L 15193863 15193914 10 189 3.5 4.0 3.8 2.1 240 chr3L 15193674 intergenic not near genes chr3L 15193794 intergenic not near genes chr3L 15193914 intergenic not near genes chr3L_10_15190001 chr3L_15190001 RAL-908 1523 chr3L 15209059 15209099 chr3L 15209165 15209205 11 106 4.5 9.5 7.0 1.4 146 chr3L 15209059 intergenic CG6888 + chr3L 15209132 intergenic not near genes chr3L 15209205 intergenic not near genes chr3L_11_15205001 chr3L_15205001 RAL-908 1524 chr3L 15233534 15233581 chr3L 15233635 15233682 17 101 2.5 4.0 3.2 4.0 148 chr3L 15233534 intergenic not near genes chr3L 15233608 intergenic not near genes chr3L 15233682 intergenic not near genes chr3L_17_15230001 chr3L_15230001 RAL-908 1525 chr3L 15257412 15257430 chr3L 15257645 15257663 7 233 6.0 3.0 4.5 1.3 251 chr3L 15257412 intergenic not near genes chr3L 15257538 intergenic not near genes chr3L 15257663 intergenic not near genes chr3L_7_15255001 chr3L_15255001 RAL-908 1526 chr3L 15264036 15264083 chr3L 15264133 15264156 8 94 0.0 2.0 1.0 4.0 120 chr3L 15264036 intergenic not near genes chr3L 15264096 intergenic not near genes chr3L 15264156 intergenic not near genes chr3L_8_15260001 chr3L_15260001 RAL-908 1527 chr3L 15273342 15273360 chr3L 15273508 15273526 5 166 1.5 7.0 4.2 1.0 184 chr3L 15273342 intergenic not near genes chr3L 15273434 intergenic not near genes chr3L 15273526 intergenic not near genes chr3L_5_15270001 chr3L_15270001 RAL-908 1528 chr3L 15281972 15281999 chr3L 15282133 15282160 4 161 0.5 9.0 4.8 0.7 188 chr3L 15281972 intergenic not near genes chr3L 15282066 intergenic not near genes chr3L 15282160 intergenic not near genes chr3L_4_15280001 chr3L_15280001 RAL-908 1529 chr3L 15295753 15295799 chr3L 15298616 15298662 gypsy5 13 2862 6.5 9.0 7.8 1.5 2909 chr3L 15295753 intergenic not near genes chr3L 15297208 intergenic not near genes chr3L 15298662 intergenic Best4 + chr3L_13_15295001 chr3L_15295001 RAL-908 1530 chr3L 15333128 15333167 chr3L 15333221 15333269 9 96 3.5 4.0 3.8 1.9 141 chr3L 15333128 intergenic CR43247 + chr3L 15333198 intergenic CR43247 + chr3L 15333269 intergenic CR43247 + chr3L_9_15330001 chr3L_15330001 RAL-908 1531 chr3L 15384937 15384986 chr3L 15385085 15385134 13 143 2.0 5.0 3.5 2.9 197 chr3L 15384937 intergenic not near genes chr3L 15385036 intergenic not near genes chr3L 15385134 intergenic not near genes chr3L_13_15385001 chr3L_15385001 RAL-908 1532 chr3L 15393644 15393692 chr3L 15393866 15393914 17 220 0.5 4.5 2.5 4.9 270 chr3L 15393644 intergenic not near genes chr3L 15393779 intergenic not near genes chr3L 15393914 intergenic not near genes chr3L_17_15390001 chr3L_15390001 RAL-908 1533 chr3L 15399825 15399861 chr3L 15399995 15400029 4 168 6.5 5.0 5.8 0.6 204 chr3L 15399825 intergenic not near genes chr3L 15399927 intergenic not near genes chr3L 15400029 intergenic not near genes chr3L_4_15395001 chr3L_15395001 RAL-908 1534 chr3L 15422477 15422490 chr3L 15422574 15422595 6 104 4.5 3.0 3.8 1.2 118 chr3L 15422477 intergenic not near genes chr3L 15422536 intergenic not near genes chr3L 15422595 intergenic not near genes chr3L_6_15420001 chr3L_15420001 RAL-908 1535 chr3L 15422492 15422508 chr3L 15422572 15422613 9 102 2.0 3.0 2.5 2.6 121 chr3L 15422492 intergenic not near genes chr3L 15422552 intergenic not near genes chr3L 15422613 intergenic not near genes chr3L_9_15420001 chr3L_15420001 RAL-908 1536 chr3L 15423743 15423761 chr3L 15426607 15426625 opus 5 2864 5.5 4.5 5.0 0.8 2882 chr3L 15423743 intergenic not near genes chr3L 15425184 intergenic not near genes chr3L 15426625 intergenic not near genes chr3L_5_15425001 chr3L_15425001 RAL-908 1537 chr3L 15444632 15444655 chr3L 15444746 15444754 4 110 7.5 3.5 5.5 0.6 122 chr3L 15444632 intergenic not near genes chr3L 15444693 intergenic not near genes chr3L 15444754 intergenic not near genes chr3L_4_15440001 chr3L_15440001 RAL-908 1538 chr3L 15466021 15466139 chr3L 15466123 15466255 10 108 0.0 0.0 0.0 10.0 234 chr3L 15466021 intergenic not near genes chr3L 15466138 intergenic not near genes chr3L 15466255 intergenic not near genes chr3L_10_15465001 chr3L_15465001 RAL-908 1539 chr3L 15466501 15466543 chr3L 15466605 15466647 7 104 3.0 4.0 3.5 1.6 146 chr3L 15466501 intergenic not near genes chr3L 15466574 intergenic not near genes chr3L 15466647 intergenic not near genes chr3L_7_15465001 chr3L_15465001 RAL-908 1540 chr3L 15474677 15474689 chr3L 15474831 15474848 5 158 1.0 4.0 2.5 1.4 171 chr3L 15474677 intergenic not near genes chr3L 15474762 intergenic not near genes chr3L 15474848 intergenic not near genes chr3L_5_15470001 chr3L_15470001 RAL-908 1541 chr3L 15482583 15482628 chr3L 15482684 15482729 7 100 2.5 2.5 2.5 2.0 146 chr3L 15482583 intergenic not near genes chr3L 15482656 intergenic not near genes chr3L 15482729 intergenic not near genes chr3L_7_15480001 chr3L_15480001 RAL-908 1542 chr3L 15511294 15511316 chr3L 15511394 15511416 7 98 3.0 6.5 4.8 1.2 122 chr3L 15511294 intron Eip71CD + chr3L 15511355 intron Eip71CD + chr3L 15511416 intron Eip71CD + chr3L_7_15510001 chr3L_15510001 RAL-908 1543 chr3L 15533103 15533155 chr3L 15533205 15533257 15 101 3.0 6.0 4.5 2.7 154 chr3L 15533103 intergenic not near genes chr3L 15533180 intergenic not near genes chr3L 15533257 intergenic not near genes chr3L_15_15530001 chr3L_15530001 RAL-908 1544 chr3L 15633163 15633216 chr3L 15633263 15633316 20 98 2.0 2.5 2.2 6.2 153 chr3L 15633163 intron comm3 - chr3L 15633240 intron comm3 - chr3L 15633316 intron comm3 - chr3L_20_15630001 chr3L_15630001 RAL-908 1545 chr3L 15641779 15641814 chr3L 15641884 15641919 8 104 0.0 4.0 2.0 2.7 140 chr3L 15641779 intron comm3 - chr3L 15641849 intron comm3 - chr3L 15641919 intron comm3 - chr3L_8_15640001 chr3L_15640001 RAL-908 1546 chr3L 15709826 15709876 chr3L 15709927 15709982 14 104 1.0 1.5 1.2 6.4 156 chr3L 15709826 intergenic not near genes chr3L 15709904 intergenic not near genes chr3L 15709982 intergenic not near genes chr3L_14_15705001 chr3L_15705001 RAL-908 1547 chr3L 15756859 15756894 chr3L 15756962 15756997 5 103 4.0 0.0 2.0 1.7 138 chr3L 15756859 intergenic not near genes chr3L 15756928 intergenic not near genes chr3L 15756997 intergenic not near genes chr3L_5_15755001 chr3L_15755001 RAL-908 1548 chr3L 15832233 15832281 chr3L 15832334 15832382 11 101 3.0 2.0 2.5 3.1 149 chr3L 15832233 intergenic dbo +,CG12713 + chr3L 15832308 intergenic CG12713 +,dbo + chr3L 15832382 intergenic CG12713 +,dbo + chr3L_11_15830001 chr3L_15830001 RAL-908 1549 chr3L 15871579 15871615 chr3L 15871683 15871719 18 104 3.5 9.0 6.2 2.5 140 chr3L 15871579 intron pHCl - chr3L 15871649 intron pHCl - chr3L 15871719 intron pHCl - chr3L_18_15870001 chr3L_15870001 RAL-908 1550 chr3L 15880587 15880619 chr3L 15880687 15880719 7 98 3.5 6.0 4.8 1.2 132 chr3L 15880587 intron pHCl - chr3L 15880653 intron pHCl - chr3L 15880719 intron pHCl - chr3L_7_15880001 chr3L_15880001 RAL-908 1551 chr3L 15883175 15883218 chr3L 15883488 15883516 12 310 5.5 1.5 3.5 2.7 341 chr3L 15883175 intron pHCl - chr3L 15883346 intron pHCl - chr3L 15883516 intron pHCl - chr3L_12_15880001 chr3L_15880001 RAL-908 1552 chr3L 15929180 15929225 chr3L 15938347 15938392 roo 12 9167 6.0 4.5 5.2 1.9 9212 chr3L 15929180 intron Pka-C3 - chr3L 15933786 intron Pka-C3 - chr3L 15938392 intron Pka-C3 - chr3L_12_15930001 chr3L_15930001 RAL-908 1553 chr3L 15956246 15956286 chr3L 15956350 15956390 20 104 3.5 6.5 5.0 3.3 144 chr3L 15956246 3` UTR GXIVsPLA2 + chr3L 15956318 3` UTR GXIVsPLA2 + chr3L 15956390 3` UTR GXIVsPLA2 + chr3L_20_15955001 chr3L_15955001 RAL-908 1554 chr3L 15981661 15981708 chr3L 15981767 15981814 5 106 4.5 5.5 5.0 0.8 153 chr3L 15981661 intron,3` UTR brm -,CG17027 + chr3L 15981738 intron,3` UTR brm -,CG17027 + chr3L 15981814 intron,3` UTR brm -,CG17027 + chr3L_5_15980001 chr3L_15980001 RAL-908 1555 chr3L 15989224 15989227 chr3L 15989322 15989330 5 102 2.5 3.0 2.8 1.3 106 chr3L 15989224 intron Hip14 + chr3L 15989277 intron Hip14 + chr3L 15989330 intron Hip14 + chr3L_5_15985001 chr3L_15985001 RAL-908 1556 chr3L 16170244 16170273 chr3L 16170340 16170369 12 93 10.5 6.0 8.2 1.3 125 chr3L 16170244 intergenic CG33796 -,CG33795 - chr3L 16170306 intergenic CG33796 -,CG33795 - chr3L 16170369 intergenic CG33796 -,CG33795 - chr3L_12_16170001 chr3L_16170001 RAL-908 1557 chr3L 16184091 16184129 chr3L 16188930 16188968 X-element 10 4838 5.0 4.5 4.8 1.7 4877 chr3L 16184091 intergenic not near genes chr3L 16186530 intergenic not near genes chr3L 16188968 intergenic not near genes chr3L_10_16185001 chr3L_16185001 RAL-908 1558 chr3L 16304848 16304882 chr3L 16304947 16304980 13 98 3.5 6.0 4.8 2.2 132 chr3L 16304848 intergenic CG43249 +,CG13043 - chr3L 16304914 intergenic CG43249 +,CG13043 - chr3L 16304980 intergenic CG13043 -,CG43249 + chr3L_13_16300001 chr3L_16300001 RAL-908 1559 chr3L 16322804 16322854 chr3L 16322914 16322964 12 109 4.0 4.0 4.0 2.4 160 chr3L 16322804 intergenic not near genes chr3L 16322884 intergenic not near genes chr3L 16322964 intergenic not near genes chr3L_12_16320001 chr3L_16320001 RAL-908 1560 chr3L 16333029 16333076 chr3L 16333126 16333173 14 96 3.0 4.0 3.5 3.1 144 chr3L 16333029 intergenic retinin +,CG13056 + chr3L 16333101 intergenic CG13056 +,retinin + chr3L 16333173 intergenic CG13056 +,retinin + chr3L_14_16330001 chr3L_16330001 RAL-908 1561 chr3L 16443831 16443876 chr3L 16446191 16446236 Doc 15 2360 2.5 4.0 3.2 3.6 2405 chr3L 16443831 intron,intron CG33158 +,dsx-c73A - chr3L 16445034 intron,intron CG33158 +,dsx-c73A - chr3L 16446236 intron,intron CG33158 +,dsx-c73A - chr3L_15_16445001 chr3L_16445001 RAL-908 1562 chr3L 16450004 16450053 chr3L 16450104 16450158 21 105 0.0 0.5 0.2 17.5 154 chr3L 16450004 intron,intron CG33158 +,dsx-c73A - chr3L 16450081 intron,intron CG33158 +,dsx-c73A - chr3L 16450158 intron,exon CG33158 +,dsx-c73A - chr3L_21_16450001 chr3L_16450001 RAL-908 1563 chr3L 16457529 16457558 chr3L 16457644 16457673 11 115 3.0 4.0 3.5 2.4 144 chr3L 16457529 intron CG33158 + chr3L 16457601 intron CG33158 + chr3L 16457673 intron CG33158 + chr3L_11_16455001 chr3L_16455001 RAL-908 1564 chr3L 16493964 16494011 chr3L 16494501 16494547 jockey 12 536 4.0 4.5 4.2 2.3 583 chr3L 16493964 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494256 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494547 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_12_16490001 chr3L_16490001 RAL-908 1565 chr3L 16503635 16503652 chr3L 16503732 16503744 5 95 5.0 5.0 5.0 0.8 109 chr3L 16503635 intron CG43373 - chr3L 16503690 intron CG43373 - chr3L 16503744 intron CG43373 - chr3L_5_16500001 chr3L_16500001 RAL-908 1566 chr3L 16540033 16540086 chr3L 16540141 16540194 15 108 4.0 2.0 3.0 3.8 161 chr3L 16540033 intron CG43373 - chr3L 16540114 intron CG43373 - chr3L 16540194 intron CG43373 - chr3L_15_16540001 chr3L_16540001 RAL-908 1567 chr3L 16542758 16542805 chr3L 16542899 16542946 20 140 2.5 5.5 4.0 4.0 188 chr3L 16542758 intron CG43373 - chr3L 16542852 intron CG43373 - chr3L 16542946 intron CG43373 - chr3L_20_16540001 chr3L_16540001 RAL-908 1568 chr3L 16547338 16547359 chr3L 16547609 16547630 4 271 1.5 3.0 2.2 1.2 292 chr3L 16547338 intergenic not near genes chr3L 16547484 intergenic not near genes chr3L 16547630 intergenic not near genes chr3L_4_16545001 chr3L_16545001 RAL-908 1569 chr3L 16616489 16616539 chr3L 16621837 16621860 297 17 5345 7.5 4.5 6.0 2.4 5371 chr3L 16616489 3` UTR Abl - chr3L 16619174 3` UTR Abl - chr3L 16621860 3` UTR Abl - chr3L_17_16615001 chr3L_16615001 RAL-908 1570 chr3L 16684004 16684044 chr3L 16689245 16689285 copia 10 5241 10.5 6.0 8.2 1.1 5281 chr3L 16684004 intron,intron Lasp -,CG43954 - chr3L 16686644 intron,intron Lasp -,CG43954 - chr3L 16689285 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_10_16685001 chr3L_16685001 RAL-908 1571 chr3L 16770452 16770480 chr3L 16770559 16770587 9 107 0.5 7.5 4.0 1.8 135 chr3L 16770452 intron Nrt + chr3L 16770520 intron Nrt + chr3L 16770587 intron Nrt + chr3L_9_16770001 chr3L_16770001 RAL-908 1572 chr3L 16808019 16808048 chr3L 16808115 16808144 8 96 9.5 0.5 5.0 1.3 125 chr3L 16808019 intron nudC + chr3L 16808082 intron nudC + chr3L 16808144 intron nudC + chr3L_8_16805001 chr3L_16805001 RAL-908 1573 chr3L 16815832 16815892 chr3L 16815938 16815995 9 105 0.0 4.0 2.0 3.0 163 chr3L 16815832 intron,intron nudC +,CG13024 - chr3L 16815914 intron,intron nudC +,CG13024 - chr3L 16815995 intron,intron nudC +,CG13024 - chr3L_9_16815001 chr3L_16815001 RAL-908 1574 chr3L 16845017 16845045 chr3L 16845150 16845178 17 133 2.5 7.5 5.0 2.8 161 chr3L 16845017 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845098 intergenic CG9669 -,CG9715 + chr3L 16845178 intergenic CG9669 -,CG9715 + chr3L_17_16845001 chr3L_16845001 RAL-908 1575 chr3L 16861011 16861054 chr3L 16861133 16861176 16 121 3.0 4.0 3.5 3.6 165 chr3L 16861011 intron,exon Rh4 -,CG13029 + chr3L 16861094 intron,intron Rh4 -,CG13029 + chr3L 16861176 intron,exon Rh4 -,CG13029 + chr3L_16_16860001 chr3L_16860001 RAL-908 1576 chr3L 16866193 16866241 chr3L 16866304 16866351 11 110 1.5 2.5 2.0 3.7 158 chr3L 16866193 intron Lmpt + chr3L 16866272 intron Lmpt + chr3L 16866351 intron Lmpt + chr3L_11_16865001 chr3L_16865001 RAL-908 1577 chr3L 16867547 16867566 chr3L 16867645 16867664 7 98 1.5 10.5 6.0 1.0 117 chr3L 16867547 intron Lmpt + chr3L 16867606 intron Lmpt + chr3L 16867664 intron Lmpt + chr3L_7_16865001 chr3L_16865001 RAL-908 1578 chr3L 16945713 16945737 chr3L 16954886 16954898 roo 7 9170 5.0 5.5 5.2 1.1 9185 chr3L 16945713 exon Obp73a + chr3L 16950306 intergenic not near genes chr3L 16954898 5` UTR Nc73EF + chr3L_7_16950001 chr3L_16950001 RAL-908 1579 chr3L 16973376 16973395 chr3L 23583081 23583100 13 6609705 7.5 14.5 11.0 1.1 6609724 chr3L 16973376 intron Exn + chr3L 20278238 exon gogo - chr3L 23583100 intron AGO3 + chr3L_13_20275001 chr3L_20275001 RAL-908 1580 chr3L 17012388 17012426 chr3L 17014198 17014243 5 1815 18.0 11.0 14.5 0.3 1855 chr3L 17012388 5` UTR CG3764 - chr3L 17013316 3` UTR CG6664 - chr3L 17014243 exon CG6664 - chr3L_5_17010001 chr3L_17010001 RAL-908 1581 chr3L 17034913 17034963 chr3L 17035121 17035171 G2 12 208 0.0 7.0 3.5 2.7 258 chr3L 17034913 intergenic not near genes chr3L 17035042 intergenic not near genes chr3L 17035171 intergenic beg + chr3L_12_17035001 chr3L_17035001 RAL-908 1582 chr3L 17084991 17085022 chr3L 17094160 17094191 roo 9 9166 7.0 6.0 6.5 1.2 9200 chr3L 17084991 intron Rbp6 - chr3L 17089591 intron Rbp6 - chr3L 17094191 intron Rbp6 - chr3L_9_17085001 chr3L_17085001 RAL-908 1583 chr3L 17104978 17105014 chr3L 17105074 17105111 4 94 3.0 7.0 5.0 0.7 133 chr3L 17104978 intron Rbp6 - chr3L 17105044 intron Rbp6 - chr3L 17105111 intron Rbp6 - chr3L_4_17105001 chr3L_17105001 RAL-908 1584 chr3L 17134280 17134325 chr3L 17134982 17135021 9 701 2.0 2.0 2.0 3.0 741 chr3L 17134280 intron Rbp6 - chr3L 17134650 intron Rbp6 - chr3L 17135021 intron Rbp6 - chr3L_9_17130001 chr3L_17130001 RAL-908 1585 chr3L 17149143 17149163 chr3L 17149244 17149264 6 101 6.0 0.0 3.0 1.5 121 chr3L 17149143 intron Rbp6 - chr3L 17149204 intron Rbp6 - chr3L 17149264 intron Rbp6 - chr3L_6_17145001 chr3L_17145001 RAL-908 1586 chr3L 17155852 17155888 chr3L 17156036 17156071 10 184 4.0 1.5 2.8 2.6 219 chr3L 17155852 intron Rbp6 - chr3L 17155962 intron Rbp6 - chr3L 17156071 intron Rbp6 - chr3L_10_17155001 chr3L_17155001 RAL-908 1587 chr3L 17164355 17164379 chr3L 17164516 17164540 4 161 2.0 1.0 1.5 1.6 185 chr3L 17164355 intron Rbp6 - chr3L 17164448 intron Rbp6 - chr3L 17164540 intron Rbp6 - chr3L_4_17160001 chr3L_17160001 RAL-908 1588 chr3L 17331052 17331095 chr3L 17331162 17331205 11 110 3.5 5.5 4.5 2.0 153 chr3L 17331052 intergenic not near genes chr3L 17331128 intergenic not near genes chr3L 17331205 intergenic not near genes chr3L_11_17330001 chr3L_17330001 RAL-908 1589 chr3L 17395926 17395978 chr3L 17396046 17396090 12 119 3.5 5.0 4.2 2.3 164 chr3L 17395926 intergenic blot - chr3L 17396008 intergenic blot - chr3L 17396090 3` UTR blot - chr3L_12_17395001 chr3L_17395001 RAL-908 1590 chr3L 17495212 17495244 chr3L 17495345 17495348 4 116 3.0 2.0 2.5 1.1 136 chr3L 17495212 intron,exon Oatp74D +,edin + chr3L 17495280 intron,3` UTR Oatp74D +,edin + chr3L 17495348 intron Oatp74D + chr3L_4_17495001 chr3L_17495001 RAL-908 1591 chr3L 17516963 17517011 chr3L 17524540 17524558 412 14 7574 3.5 2.5 3.0 3.5 7595 chr3L 17516963 intron CG7564 + chr3L 17520760 intron CG7564 + chr3L 17524558 3` UTR CG7564 + chr3L_14_17520001 chr3L_17520001 RAL-908 1592 chr3L 17535793 17535844 chr3L 17535927 17535939 14 130 2.5 2.0 2.2 4.4 146 chr3L 17535793 intron Nedd4 + chr3L 17535866 intron Nedd4 + chr3L 17535939 intron Nedd4 + chr3L_14_17535001 chr3L_17535001 RAL-908 1593 chr3L 17592793 17592819 chr3L 17592904 17592930 12 111 0.0 5.5 2.8 3.2 137 chr3L 17592793 intron Eip74EF - chr3L 17592862 intron Eip74EF - chr3L 17592930 intron Eip74EF - chr3L_12_17590001 chr3L_17590001 RAL-908 1594 chr3L 17646017 17646050 chr3L 17646162 17646213 14 149 25.5 42.0 33.8 0.4 196 chr3L 17646017 exon CG43085 - chr3L 17646115 exon CG43085 - chr3L 17646213 exon CG43085 - chr3L_14_17645001 chr3L_17645001 RAL-908 1595 chr3L 17646832 17646877 chr3L 17646929 17646974 22 97 5.0 6.0 5.5 3.4 142 chr3L 17646832 intergenic CG43085 - chr3L 17646903 intergenic CG43085 - chr3L 17646974 intergenic CG43085 -,Ndfip - chr3L_22_17645001 chr3L_17645001 RAL-908 1596 chr3L 17730830 17730876 chr3L 17738180 17738226 mdg1 17 7349 6.0 3.5 4.8 2.9 7396 chr3L 17730830 intron Ccn + chr3L 17734528 intron Ccn + chr3L 17738226 intron Ccn + chr3L_17_17730001 chr3L_17730001 RAL-908 1597 chr3L 17753334 17753356 chr3L 17753440 17753462 6 106 4.0 6.0 5.0 1.0 128 chr3L 17753334 intron Adgf-A - chr3L 17753398 intron Adgf-A - chr3L 17753462 intron Adgf-A - chr3L_6_17750001 chr3L_17750001 RAL-908 1598 chr3L 17789827 17789872 chr3L 17789923 17789968 18 96 3.0 5.0 4.0 3.6 141 chr3L 17789827 intergenic not near genes chr3L 17789898 intergenic not near genes chr3L 17789968 intergenic not near genes chr3L_18_17785001 chr3L_17785001 RAL-908 1599 chr3L 17790600 17790633 chr3L 17790885 17790918 7 285 2.0 7.0 4.5 1.3 318 chr3L 17790600 intergenic CG42815 - chr3L 17790759 intergenic CG42815 - chr3L 17790918 intergenic CG42815 - chr3L_7_17790001 chr3L_17790001 RAL-908 1600 chr3L 17799792 17799841 chr3L 17801599 17801648 S-element 22 1806 4.5 4.0 4.2 4.2 1856 chr3L 17799792 intron NUCB1 - chr3L 17800720 intron NUCB1 - chr3L 17801648 intron NUCB1 - chr3L_22_17800001 chr3L_17800001 RAL-908 1601 chr3L 17884677 17884709 chr3L 17884797 17884829 13 119 3.0 1.5 2.2 4.1 152 chr3L 17884677 intergenic CG5506 - chr3L 17884753 intergenic CG5506 - chr3L 17884829 intergenic CG5506 - chr3L_13_17880001 chr3L_17880001 RAL-908 1602 chr3L 17918361 17918401 chr3L 17921183 17921224 opus 12 2822 3.0 4.5 3.8 2.5 2863 chr3L 17918361 intergenic not near genes chr3L 17919792 intergenic not near genes chr3L 17921224 intergenic not near genes chr3L_12_17915001 chr3L_17915001 RAL-908 1603 chr3L 17924894 17924934 chr3L 17924992 17925033 17 99 2.0 4.0 3.0 4.2 139 chr3L 17924894 intergenic not near genes chr3L 17924964 intergenic not near genes chr3L 17925033 intergenic not near genes chr3L_17_17920001 chr3L_17920001 RAL-908 1604 chr3L 18013950 18013982 chr3L 18014059 18014076 7 105 6.0 0.0 3.0 1.8 126 chr3L 18013950 intron Eip75B - chr3L 18014013 intron Eip75B - chr3L 18014076 intron Eip75B - chr3L_7_18010001 chr3L_18010001 RAL-908 1605 chr3L 18029939 18029967 chr3L 18030036 18030064 7 97 5.5 0.0 2.8 1.8 125 chr3L 18029939 intron Eip75B - chr3L 18030002 intron Eip75B - chr3L 18030064 intron Eip75B - chr3L_7_18030001 chr3L_18030001 RAL-908 1606 chr3L 18047696 18047735 chr3L 18056772 18056812 roo 5 9077 3.0 7.5 5.2 0.8 9116 chr3L 18047696 intron Eip75B - chr3L 18052254 intron Eip75B - chr3L 18056812 intron Eip75B - chr3L_5_18050001 chr3L_18050001 RAL-908 1607 chr3L 18057954 18058012 chr3L 18058075 18058133 16 120 2.5 1.0 1.8 5.7 179 chr3L 18057954 intron Eip75B - chr3L 18058044 intron Eip75B - chr3L 18058133 intron Eip75B - chr3L_16_18055001 chr3L_18055001 RAL-908 1608 chr3L 18064041 18064073 chr3L 18064147 18064176 10 105 0.5 5.0 2.8 2.6 135 chr3L 18064041 intron Eip75B - chr3L 18064108 intron Eip75B - chr3L 18064176 intron Eip75B - chr3L_10_18060001 chr3L_18060001 RAL-908 1609 chr3L 18066289 18066293 chr3L 18066459 18066462 4 170 8.5 5.5 7.0 0.5 173 chr3L 18066289 intergenic not near genes chr3L 18066376 intergenic not near genes chr3L 18066462 intergenic not near genes chr3L_4_18065001 chr3L_18065001 RAL-908 1610 chr3L 18073960 18074007 chr3L 18074081 18074125 15 121 5.0 5.0 5.0 2.5 165 chr3L 18073960 intergenic CG44004 - chr3L 18074042 intergenic CG44004 - chr3L 18074125 intergenic CG44004 - chr3L_15_18070001 chr3L_18070001 RAL-908 1611 chr3L 18092761 18092791 chr3L 18092896 18092926 11 135 3.5 0.0 1.8 3.9 165 chr3L 18092761 intron CG13698 - chr3L 18092844 intron CG13698 - chr3L 18092926 intron CG13698 - chr3L_11_18090001 chr3L_18090001 RAL-908 1612 chr3L 18106240 18106276 chr3L 18106379 18106415 9 138 0.5 0.0 0.2 7.5 175 chr3L 18106240 intergenic CG13698 -,mRpS26 + chr3L 18106328 intergenic CG13698 -,mRpS26 + chr3L 18106415 intergenic mRpS26 +,CG13698 - chr3L_9_18105001 chr3L_18105001 RAL-908 1613 chr3L 18107596 18107641 chr3L 18107709 18107754 12 111 2.5 5.5 4.0 2.4 158 chr3L 18107596 intergenic mRpS26 +,CG5147 - chr3L 18107675 intergenic CG5147 -,mRpS26 + chr3L 18107754 intergenic CG5147 -,mRpS26 + chr3L_12_18105001 chr3L_18105001 RAL-908 1614 chr3L 18122610 18122660 chr3L 18122707 18122757 19 96 4.5 6.0 5.2 3.1 147 chr3L 18122610 intergenic not near genes chr3L 18122684 intergenic not near genes chr3L 18122757 intergenic not near genes chr3L_19_18120001 chr3L_18120001 RAL-908 1615 chr3L 18136672 18136682 chr3L 18136770 18136780 6 98 0.5 3.5 2.0 2.0 108 chr3L 18136672 intergenic CR44669 - chr3L 18136726 intergenic CR44669 - chr3L 18136780 intergenic not near genes chr3L_6_18135001 chr3L_18135001 RAL-908 1616 chr3L 18150360 18150389 chr3L 18150462 18150492 7 103 4.5 4.0 4.2 1.3 132 chr3L 18150360 intron CG7330 + chr3L 18150426 intron CG7330 + chr3L 18150492 intron CG7330 + chr3L_7_18150001 chr3L_18150001 RAL-908 1617 chr3L 18160657 18160666 chr3L 18160759 18160768 7 102 2.5 2.0 2.2 2.2 111 chr3L 18160657 intron CG13699 - chr3L 18160712 intron CG13699 - chr3L 18160768 intron CG13699 - chr3L_7_18160001 chr3L_18160001 RAL-908 1618 chr3L 18172682 18172699 chr3L 18172778 18172795 5 96 6.5 5.0 5.8 0.7 113 chr3L 18172682 intron W - chr3L 18172738 intron W - chr3L 18172795 intron W - chr3L_5_18170001 chr3L_18170001 RAL-908 1619 chr3L 18175796 18175834 chr3L 18176055 18176093 15 259 2.5 3.5 3.0 3.8 297 chr3L 18175796 intron W - chr3L 18175944 intron W - chr3L 18176093 intron W - chr3L_15_18175001 chr3L_18175001 RAL-908 1620 chr3L 18189567 18189583 chr3L 18190214 18190230 S-element 4 647 14.0 4.0 9.0 0.4 663 chr3L 18189567 intergenic not near genes chr3L 18189898 intergenic not near genes chr3L 18190230 intergenic not near genes chr3L_4_18185001 chr3L_18185001 RAL-908 1621 chr3L 18198930 18198931 chr3L 24821492 24821494 17 6622563 15.0 4.5 9.8 1.6 6622564 chr3L 18198930 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_17_21510001 chr3L_21510001 RAL-908 1622 chr3L 18209190 18209195 chr3L 18209296 18209301 4 106 4.0 6.5 5.2 0.6 111 chr3L 18209190 intergenic not near genes chr3L 18209246 intergenic not near genes chr3L 18209301 intergenic not near genes chr3L_4_18205001 chr3L_18205001 RAL-908 1623 chr3L 18223146 18223185 chr3L 18223249 18223300 9 107 2.5 0.0 1.2 4.1 154 chr3L 18223146 intergenic not near genes chr3L 18223223 intergenic not near genes chr3L 18223300 intergenic not near genes chr3L_9_18220001 chr3L_18220001 RAL-908 1624 chr3L 18248952 18248982 chr3L 18249070 18249099 13 118 3.5 3.0 3.2 3.1 147 chr3L 18248952 intergenic not near genes chr3L 18249026 intergenic not near genes chr3L 18249099 intergenic not near genes chr3L_13_18245001 chr3L_18245001 RAL-908 1625 chr3L 18262467 18262486 chr3L 18262573 18262592 7 106 5.5 5.0 5.2 1.1 125 chr3L 18262467 intergenic not near genes chr3L 18262530 intergenic not near genes chr3L 18262592 intergenic not near genes chr3L_7_18260001 chr3L_18260001 RAL-908 1626 chr3L 18267840 18267988 chr3L 18267937 18268085 20 96 1.5 1.5 1.5 8.0 245 chr3L 18267840 intergenic not near genes chr3L 18267962 intergenic not near genes chr3L 18268085 intergenic not near genes chr3L_20_18265001 chr3L_18265001 RAL-908 1627 chr3L 18359581 18359628 chr3L 18359693 18359739 9 112 2.0 6.5 4.2 1.7 158 chr3L 18359581 intergenic not near genes chr3L 18359660 intergenic not near genes chr3L 18359739 intergenic not near genes chr3L_9_18355001 chr3L_18355001 RAL-908 1628 chr3L 18376060 18376099 chr3L 18376169 18376202 4 108 5.5 0.5 3.0 1.0 142 chr3L 18376060 intergenic not near genes chr3L 18376131 intergenic not near genes chr3L 18376202 intergenic not near genes chr3L_4_18375001 chr3L_18375001 RAL-908 1629 chr3L 18382044 18382047 chr3L 18382148 18382151 4 104 2.0 0.0 1.0 2.0 107 chr3L 18382044 intergenic not near genes chr3L 18382098 intergenic not near genes chr3L 18382151 intergenic not near genes chr3L_4_18380001 chr3L_18380001 RAL-908 1630 chr3L 18406117 18406154 chr3L 18406213 18406250 7 96 3.0 4.5 3.8 1.5 133 chr3L 18406117 intergenic not near genes chr3L 18406184 intergenic not near genes chr3L 18406250 intergenic not near genes chr3L_7_18405001 chr3L_18405001 RAL-908 1631 chr3L 18408714 18408753 chr3L 18408820 18408859 13 105 5.5 4.5 5.0 2.2 145 chr3L 18408714 intergenic not near genes chr3L 18408786 intergenic not near genes chr3L 18408859 intergenic not near genes chr3L_13_18405001 chr3L_18405001 RAL-908 1632 chr3L 18436049 18436092 chr3L 18436167 18436210 10 118 4.5 7.5 6.0 1.4 161 chr3L 18436049 intergenic not near genes chr3L 18436130 intergenic not near genes chr3L 18436210 intergenic not near genes chr3L_10_18435001 chr3L_18435001 RAL-908 1633 chr3L 18445229 18445283 chr3L 18445327 18445356 17 96 4.0 0.5 2.2 5.3 127 chr3L 18445229 intergenic not near genes chr3L 18445292 intergenic not near genes chr3L 18445356 intergenic not near genes chr3L_17_18445001 chr3L_18445001 RAL-908 1634 chr3L 18448600 18448607 chr3L 18448712 18448719 4 112 9.0 4.0 6.5 0.5 119 chr3L 18448600 intergenic not near genes chr3L 18448660 intergenic not near genes chr3L 18448719 intergenic not near genes chr3L_4_18445001 chr3L_18445001 RAL-908 1635 chr3L 18456253 18456298 chr3L 18456360 18456406 14 108 2.5 3.0 2.8 3.7 153 chr3L 18456253 intergenic CR44670 - chr3L 18456330 intergenic CR44670 - chr3L 18456406 3` UTR CR44670 - chr3L_14_18455001 chr3L_18455001 RAL-908 1636 chr3L 18506120 18506157 chr3L 18509603 18509640 F-element 13 3483 3.5 7.5 5.5 2.0 3520 chr3L 18506120 intergenic not near genes chr3L 18507880 intergenic not near genes chr3L 18509640 intergenic not near genes chr3L_13_18505001 chr3L_18505001 RAL-908 1637 chr3L 18511869 18511902 chr3L 18511981 18512014 9 111 5.0 5.0 5.0 1.5 145 chr3L 18511869 intergenic not near genes chr3L 18511942 intergenic not near genes chr3L 18512014 intergenic not near genes chr3L_9_18510001 chr3L_18510001 RAL-908 1638 chr3L 18528608 18528658 chr3L 18537789 18537839 roo 18 9180 5.5 6.0 5.8 2.6 9231 chr3L 18528608 intergenic not near genes chr3L 18533224 intergenic not near genes chr3L 18537839 intergenic not near genes chr3L_18_18530001 chr3L_18530001 RAL-908 1639 chr3L 18538616 18538657 chr3L 18539129 18539170 8 513 2.5 5.0 3.8 1.7 554 chr3L 18538616 intergenic not near genes chr3L 18538893 intergenic not near genes chr3L 18539170 intergenic not near genes chr3L_8_18535001 chr3L_18535001 RAL-908 1640 chr3L 18570783 18570806 chr3L 18570946 18570968 9 163 5.0 5.5 5.2 1.5 185 chr3L 18570783 intron AstC-R1 + chr3L 18570876 intron AstC-R1 + chr3L 18570968 intron AstC-R1 + chr3L_9_18570001 chr3L_18570001 RAL-908 1641 chr3L 18581315 18581364 chr3L 18581412 18581461 17 97 4.5 6.0 5.2 2.7 146 chr3L 18581315 intergenic not near genes chr3L 18581388 intergenic not near genes chr3L 18581461 intergenic not near genes chr3L_17_18580001 chr3L_18580001 RAL-908 1642 chr3L 18593933 18593963 chr3L 18595933 18595963 Doc 12 2000 7.0 3.5 5.2 1.9 2030 chr3L 18593933 intergenic term - chr3L 18594948 intergenic not near genes chr3L 18595963 intergenic CR45389 + chr3L_12_18590001 chr3L_18590001 RAL-908 1643 chr3L 18656178 18656219 chr3L 18656283 18656312 9 99 3.0 5.0 4.0 1.8 134 chr3L 18656178 intron MYPT-75D + chr3L 18656245 intron MYPT-75D + chr3L 18656312 intron MYPT-75D + chr3L_9_18655001 chr3L_18655001 RAL-908 1644 chr3L 18710740 18710791 chr3L 18718712 18718763 Stalker2 15 7971 4.5 3.0 3.8 3.1 8023 chr3L 18710740 intergenic not near genes chr3L 18714752 intergenic not near genes chr3L 18718763 intergenic not near genes chr3L_15_18710001 chr3L_18710001 RAL-908 1645 chr3L 18721770 18721788 chr3L 18721881 18721899 5 111 3.5 6.0 4.8 0.9 129 chr3L 18721770 intergenic CG12477 - chr3L 18721834 intergenic CG12477 - chr3L 18721899 3` UTR CG12477 - chr3L_5_18720001 chr3L_18720001 RAL-908 1646 chr3L 18721790 18721804 chr3L 18721868 18721915 6 104 1.5 4.0 2.8 1.6 125 chr3L 18721790 intergenic CG12477 - chr3L 18721852 intergenic CG12477 - chr3L 18721915 3` UTR CG12477 - chr3L_6_18720001 chr3L_18720001 RAL-908 1647 chr3L 18738665 18738690 chr3L 18738773 18738798 7 108 2.5 8.5 5.5 1.1 133 chr3L 18738665 intergenic not near genes chr3L 18738732 intergenic not near genes chr3L 18738798 intergenic not near genes chr3L_7_18735001 chr3L_18735001 RAL-908 1648 chr3L 18753530 18753563 chr3L 18753630 18753665 12 100 4.0 4.0 4.0 2.4 135 chr3L 18753530 intron ftz-f1 - chr3L 18753598 intron ftz-f1 - chr3L 18753665 intron ftz-f1 - chr3L_12_18750001 chr3L_18750001 RAL-908 1649 chr3L 18756681 18756710 chr3L 18756790 18756819 14 108 3.5 2.0 2.8 3.7 138 chr3L 18756681 intron ftz-f1 - chr3L 18756750 intron ftz-f1 - chr3L 18756819 intron ftz-f1 - chr3L_14_18755001 chr3L_18755001 RAL-908 1650 chr3L 18772391 18772433 chr3L 18781092 18781108 roo 22 8700 4.5 4.0 4.2 4.2 8717 chr3L 18772391 intron ftz-f1 - chr3L 18776750 intron ftz-f1 - chr3L 18781108 intron ftz-f1 - chr3L_22_18775001 chr3L_18775001 RAL-908 1651 chr3L 18784373 18784405 chr3L 18784482 18784514 13 108 4.0 10.0 7.0 1.6 141 chr3L 18784373 intron ftz-f1 - chr3L 18784444 intron ftz-f1 - chr3L 18784514 intron ftz-f1 - chr3L_13_18780001 chr3L_18780001 RAL-908 1652 chr3L 18833760 18833804 chr3L 18834944 18834988 1360 9 1181 4.0 4.0 4.0 1.8 1228 chr3L 18833760 intron Indy - chr3L 18834374 intron Indy - chr3L 18834988 intron Indy - chr3L_9_18830001 chr3L_18830001 RAL-908 1653 chr3L 18933605 18933657 chr3L 18933719 18933770 10 114 1.0 4.0 2.5 2.9 165 chr3L 18933605 intron CG32204 - chr3L 18933688 intron CG32204 - chr3L 18933770 intron CG32204 - chr3L_10_18930001 chr3L_18930001 RAL-908 1654 chr3L 18965001 18965033 chr3L 18965108 18965152 6 116 5.0 2.5 3.8 1.2 151 chr3L 18965001 intergenic not near genes chr3L 18965076 intergenic not near genes chr3L 18965152 intergenic not near genes chr3L_6_18965001 chr3L_18965001 RAL-908 1655 chr3L 18982854 18982873 chr3L 18983113 18983132 10 259 7.0 4.5 5.8 1.5 278 chr3L 18982854 intergenic not near genes chr3L 18982993 intergenic not near genes chr3L 18983132 intergenic not near genes chr3L_10_18980001 chr3L_18980001 RAL-908 1656 chr3L 19008830 19008869 chr3L 19009188 19009222 jockey 13 357 4.0 4.5 4.2 2.5 392 chr3L 19008830 intron nkd - chr3L 19009026 intron nkd - chr3L 19009222 intron nkd - chr3L_13_19005001 chr3L_19005001 RAL-908 1657 chr3L 19009966 19010004 chr3L 19010103 19010157 10 151 4.5 3.5 4.0 2.0 191 chr3L 19009966 intron nkd - chr3L 19010062 intron nkd - chr3L 19010157 intron nkd - chr3L_10_19010001 chr3L_19010001 RAL-908 1658 chr3L 19015161 19015217 chr3L 19015265 19015317 13 102 0.0 3.5 1.8 4.6 156 chr3L 19015161 intron nkd - chr3L 19015239 intron nkd - chr3L 19015317 intron nkd - chr3L_13_19015001 chr3L_19015001 RAL-908 1659 chr3L 19025918 19025964 chr3L 19026022 19026069 8 102 3.0 0.5 1.8 2.9 151 chr3L 19025918 intron nkd - chr3L 19025994 intron nkd - chr3L 19026069 intron nkd - chr3L_8_19025001 chr3L_19025001 RAL-908 1660 chr3L 19115630 19115671 chr3L 19115821 19115842 BS 9 193 2.5 6.0 4.2 1.7 212 chr3L 19115630 intron CG14082 - chr3L 19115736 intron CG14082 - chr3L 19115842 intron CG14082 - chr3L_9_19115001 chr3L_19115001 RAL-908 1661 chr3L 19117034 19117073 chr3L 19124489 19124538 mdg1 7 7460 3.0 3.0 3.0 1.8 7504 chr3L 19117034 intron CG14082 - chr3L 19120786 intron CG14082 - chr3L 19124538 intron CG14082 - chr3L_7_19120001 chr3L_19120001 RAL-908 1662 chr3L 19182376 19182417 chr3L 19182477 19182518 10 101 4.0 5.5 4.8 1.7 142 chr3L 19182376 intron fz2 - chr3L 19182447 intron fz2 - chr3L 19182518 intron fz2 - chr3L_10_19180001 chr3L_19180001 RAL-908 1663 chr3L 19190066 19190080 chr3L 19190163 19190177 5 96 3.0 2.0 2.5 1.4 111 chr3L 19190066 intron fz2 - chr3L 19190122 intron fz2 - chr3L 19190177 intron fz2 - chr3L_5_19190001 chr3L_19190001 RAL-908 1664 chr3L 19190087 19190105 chr3L 19190154 19190183 5 84 2.5 2.0 2.2 1.6 96 chr3L 19190087 intron fz2 - chr3L 19190135 intron fz2 - chr3L 19190183 intron fz2 - chr3L_5_19190001 chr3L_19190001 RAL-908 1665 chr3L 19208045 19208090 chr3L 19209439 19209484 Doc 12 1393 1.5 2.5 2.0 4.0 1439 chr3L 19208045 intron fz2 - chr3L 19208764 intron fz2 - chr3L 19209484 intron fz2 - chr3L_12_19205001 chr3L_19205001 RAL-908 1666 chr3L 19220633 19220633 chr3L 22908066 22908067 13 3687434 13.0 18.0 15.5 0.8 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_13_21060001 chr3L_21060001 RAL-908 1667 chr3L 19220637 19220638 chr3L 22908066 22908067 5 3687429 13.5 18.0 15.8 0.3 3687430 chr3L 19220637 intron fz2 - chr3L 21064352 intron siz + chr3L 22908067 intergenic not near genes chr3L_5_21060001 chr3L_21060001 RAL-908 1668 chr3L 19223318 19223370 chr3L 19223441 19223493 10 123 3.5 0.5 2.0 3.3 175 chr3L 19223318 intron fz2 - chr3L 19223406 intron fz2 - chr3L 19223493 intron fz2 - chr3L_10_19220001 chr3L_19220001 RAL-908 1669 chr3L 19244098 19244135 chr3L 19244196 19244200 8 92 3.0 0.5 1.8 2.9 102 chr3L 19244098 intergenic not near genes chr3L 19244149 intergenic not near genes chr3L 19244200 intergenic not near genes chr3L_8_19240001 chr3L_19240001 RAL-908 1670 chr3L 19390710 19390727 chr3L 19390828 19390845 4 116 4.0 2.5 3.2 1.0 135 chr3L 19390710 intron CG32206 - chr3L 19390778 intron CG32206 - chr3L 19390845 intron CG32206 - chr3L_4_19390001 chr3L_19390001 RAL-908 1671 chr3L 19431720 19431743 chr3L 19431925 19431950 5 205 3.5 0.0 1.8 1.8 230 chr3L 19431720 intergenic not near genes chr3L 19431835 intergenic not near genes chr3L 19431950 intergenic not near genes chr3L_5_19430001 chr3L_19430001 RAL-908 1672 chr3L 19439281 19439289 chr3L 19439386 19439395 5 106 2.5 6.0 4.2 1.0 114 chr3L 19439281 intergenic not near genes chr3L 19439338 intergenic not near genes chr3L 19439395 intergenic not near genes chr3L_5_19435001 chr3L_19435001 RAL-908 1673 chr3L 19498430 19498472 chr3L 19503636 19503678 9 5207 26.5 15.0 20.8 0.4 5248 chr3L 19498430 3` UTR CG9451 - chr3L 19501054 3` UTR CG9452 - chr3L 19503678 5` UTR CG9452 - chr3L_9_19500001 chr3L_19500001 RAL-908 1674 chr3L 19567555 19567587 chr3L 19567657 19567689 10 102 4.5 6.5 5.5 1.5 134 chr3L 19567555 3` UTR Shal - chr3L 19567622 3` UTR Shal - chr3L 19567689 3` UTR Shal - chr3L_10_19565001 chr3L_19565001 RAL-908 1675 chr3L 19605566 19605574 chr3L 19605674 19605682 9 108 4.5 17.0 10.8 0.8 116 chr3L 19605566 intron lush - chr3L 19605624 intron lush - chr3L 19605682 intron lush - chr3L_9_19605001 chr3L_19605001 RAL-908 1676 chr3L 19792348 19792363 chr3L 19792463 19792478 9 115 10.0 12.0 11.0 0.8 130 chr3L 19792348 intron,intron CG42637 -,Gyc76C - chr3L 19792413 intron,intron CG42637 -,Gyc76C - chr3L 19792478 intron,intron CG42637 -,Gyc76C - chr3L_9_19790001 chr3L_19790001 RAL-908 1677 chr3L 19820282 19820307 chr3L 19827851 19827871 412 13 7569 4.0 4.0 4.0 2.6 7589 chr3L 19820282 intron Deaf1 + chr3L 19824076 intron Deaf1 + chr3L 19827871 intron Deaf1 + chr3L_13_19820001 chr3L_19820001 RAL-908 1678 chr3L 19861802 19861853 chr3L 19863610 19863661 S-element 14 1804 3.5 2.0 2.8 3.7 1859 chr3L 19861802 5` UTR CR45433 + chr3L 19862732 intergenic not near genes chr3L 19863661 intergenic not near genes chr3L_14_19860001 chr3L_19860001 RAL-908 1679 chr3L 19894719 19894766 chr3L 19894822 19894847 4 98 11.5 13.0 12.2 0.3 128 chr3L 19894719 intron,5` UTR Mi-2 -,Su(Tpl) - chr3L 19894783 intron,5` UTR Mi-2 -,Su(Tpl) - chr3L 19894847 intron,5` UTR Mi-2 -,Su(Tpl) - chr3L_4_19890001 chr3L_19890001 RAL-908 1680 chr3L 19933518 19933561 chr3L 19934360 19934403 16 841 3.0 2.5 2.8 4.2 885 chr3L 19933518 intergenic CR45678 + chr3L 19933960 5` UTR CR45678 + chr3L 19934403 intergenic CR45678 + chr3L_16_19930001 chr3L_19930001 RAL-908 1681 chr3L 19962931 19962979 chr3L 19963029 19963077 4 98 2.0 4.0 3.0 1.0 146 chr3L 19962931 intron Ac76E + chr3L 19963004 intron Ac76E + chr3L 19963077 intron Ac76E + chr3L_4_19960001 chr3L_19960001 RAL-908 1682 chr3L 19981193 19981212 chr3L 19981293 19981312 6 100 6.5 6.0 6.2 0.8 119 chr3L 19981193 intergenic CG17732 + chr3L 19981252 intergenic CG17732 + chr3L 19981312 intergenic CG17732 + chr3L_6_19980001 chr3L_19980001 RAL-908 1683 chr3L 19981221 19981236 chr3L 19981292 19981336 6 95 3.5 5.5 4.5 1.1 115 chr3L 19981221 intergenic CG17732 + chr3L 19981278 intergenic CG17732 + chr3L 19981336 intergenic CG17732 + chr3L_6_19980001 chr3L_19980001 RAL-908 1684 chr3L 20038803 20038853 chr3L 20039001 20039050 5 196 3.0 3.5 3.2 1.2 247 chr3L 20038803 intergenic not near genes chr3L 20038926 intergenic not near genes chr3L 20039050 intergenic not near genes chr3L_5_20035001 chr3L_20035001 RAL-908 1685 chr3L 20057543 20057588 chr3L 20057676 20057721 10 133 4.0 3.0 3.5 2.2 178 chr3L 20057543 intergenic not near genes chr3L 20057632 intergenic not near genes chr3L 20057721 intergenic not near genes chr3L_10_20055001 chr3L_20055001 RAL-908 1686 chr3L 20081723 20081767 chr3L 20081826 20081870 12 103 5.0 3.5 4.2 2.3 147 chr3L 20081723 intron sNPF-R - chr3L 20081796 intron sNPF-R - chr3L 20081870 intron sNPF-R - chr3L_12_20080001 chr3L_20080001 RAL-908 1687 chr3L 20086767 20086810 chr3L 20086865 20086908 14 96 5.5 0.0 2.8 3.7 141 chr3L 20086767 intron sNPF-R - chr3L 20086838 intron sNPF-R - chr3L 20086908 intron sNPF-R - chr3L_14_20085001 chr3L_20085001 RAL-908 1688 chr3L 20113639 20113688 chr3L 20122916 20122965 roo 25 9276 5.5 3.5 4.5 4.5 9326 chr3L 20113639 intergenic not near genes chr3L 20118302 intergenic not near genes chr3L 20122965 intergenic not near genes chr3L_25_20115001 chr3L_20115001 RAL-908 1689 chr3L 20143065 20143112 chr3L 20143165 20143212 15 99 4.0 8.0 6.0 2.1 147 chr3L 20143065 intergenic not near genes chr3L 20143138 intergenic not near genes chr3L 20143212 intergenic not near genes chr3L_15_20140001 chr3L_20140001 RAL-908 1690 chr3L 20146331 20146356 chr3L 20146669 20146693 5 336 4.5 6.0 5.2 0.8 362 chr3L 20146331 intergenic not near genes chr3L 20146512 intergenic not near genes chr3L 20146693 intergenic not near genes chr3L_5_20145001 chr3L_20145001 RAL-908 1691 chr3L 20148266 20148317 chr3L 20148376 20148427 7 110 1.0 4.0 2.5 2.0 161 chr3L 20148266 intergenic not near genes chr3L 20148346 intergenic not near genes chr3L 20148427 intergenic not near genes chr3L_7_20145001 chr3L_20145001 RAL-908 1692 chr3L 20218218 20218223 chr3L 20218354 20218359 6 136 0.0 11.0 5.5 0.9 141 chr3L 20218218 intergenic CG6933 - chr3L 20218288 intergenic CG6933 - chr3L 20218359 intergenic CG6933 - chr3L_6_20215001 chr3L_20215001 RAL-908 1693 chr3L 20257312 20257355 chr3L 20258452 20258473 pogo 12 1138 8.5 3.0 5.8 1.8 1161 chr3L 20257312 intron rdgC + chr3L 20257892 intron rdgC + chr3L 20258473 intron rdgC + chr3L_12_20255001 chr3L_20255001 RAL-908 1694 chr3L 20315632 20315669 chr3L 20315732 20315769 13 100 4.5 3.5 4.0 2.6 137 chr3L 20315632 3` UTR,intron alphaSnap +,CR43875 - chr3L 20315700 3` UTR,intron alphaSnap +,CR43875 - chr3L 20315769 3` UTR,intron alphaSnap +,CR43875 - chr3L_13_20315001 chr3L_20315001 RAL-908 1695 chr3L 20405565 20405605 chr3L 20405669 20405703 7 97 4.5 3.0 3.8 1.5 138 chr3L 20405565 intergenic not near genes chr3L 20405634 intergenic not near genes chr3L 20405703 intergenic not near genes chr3L_7_20405001 chr3L_20405001 RAL-908 1696 chr3L 20409865 20409912 chr3L 20409971 20409993 17 103 5.0 1.5 3.2 4.0 128 chr3L 20409865 intron CG13248 - chr3L 20409929 intron CG13248 - chr3L 20409993 intron CG13248 - chr3L_17_20405001 chr3L_20405001 RAL-908 1697 chr3L 20447679 20447683 chr3L 20447778 20447782 4 99 10.0 2.0 6.0 0.6 103 chr3L 20447679 intron CG5910 + chr3L 20447730 intron CG5910 + chr3L 20447782 intron CG5910 + chr3L_4_20445001 chr3L_20445001 RAL-908 1698 chr3L 20476736 20476772 chr3L 20484355 20484391 springer 14 7617 4.5 4.0 4.2 2.7 7655 chr3L 20476736 3` UTR isoQC + chr3L 20480564 intergenic not near genes chr3L 20484391 3` UTR ZnT77C - chr3L_14_20480001 chr3L_20480001 RAL-908 1699 chr3L 20490746 20490761 chr3L 20490907 20490926 5 164 1.0 3.5 2.2 1.6 180 chr3L 20490746 intron ZnT77C - chr3L 20490836 intron ZnT77C - chr3L 20490926 intron ZnT77C - chr3L_5_20490001 chr3L_20490001 RAL-908 1700 chr3L 20525228 20525228 chr3L 22908066 22908067 23 2382838 17.0 18.0 17.5 1.2 2382839 chr3L 20525228 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_23_21715001 chr3L_21715001 RAL-908 1701 chr3L 20525228 20525228 chr3L 24821489 24821494 18 4296264 17.0 3.0 10.0 1.6 4296266 chr3L 20525228 intron CG4825 - chr3L 22673361 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_18_22670001 chr3L_22670001 RAL-908 1702 chr3L 20525229 20525229 chr3L 22908066 22908067 27 2382838 17.0 18.0 17.5 1.5 2382838 chr3L 20525229 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_27_21715001 chr3L_21715001 RAL-908 1703 chr3L 20525229 20525229 chr3L 24821491 24821498 22 4296264 17.0 4.5 10.8 1.9 4296269 chr3L 20525229 intron CG4825 - chr3L 22673364 intron CG14457 + chr3L 24821498 intergenic not near genes chr3L_22_22670001 chr3L_22670001 RAL-908 1704 chr3L 20525230 20525230 chr3L 24821490 24821494 12 4296263 17.0 3.5 10.2 1.1 4296264 chr3L 20525230 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_12_22670001 chr3L_22670001 RAL-908 1705 chr3L 20548343 20548387 chr3L 20548452 20548496 15 109 3.5 3.0 3.2 3.6 153 chr3L 20548343 intergenic not near genes chr3L 20548420 intergenic not near genes chr3L 20548496 intergenic not near genes chr3L_15_20545001 chr3L_20545001 RAL-908 1706 chr3L 20590051 20590061 chr3L 20590610 20590614 412 4 557 8.0 3.0 5.5 0.6 563 chr3L 20590051 intergenic not near genes chr3L 20590332 intergenic not near genes chr3L 20590614 intergenic not near genes chr3L_4_20590001 chr3L_20590001 RAL-908 1707 chr3L 20590062 20590085 chr3L 20590604 20590644 412 5 551 5.5 2.5 4.0 1.0 582 chr3L 20590062 intergenic not near genes chr3L 20590353 intergenic not near genes chr3L 20590644 intergenic not near genes chr3L_5_20590001 chr3L_20590001 RAL-908 1708 chr3L 20677597 20677642 chr3L 20677697 20677742 17 98 4.5 4.5 4.5 3.1 145 chr3L 20677597 intergenic not near genes chr3L 20677670 intergenic not near genes chr3L 20677742 intergenic not near genes chr3L_17_20675001 chr3L_20675001 RAL-908 1709 chr3L 20849252 20849300 chr3L 20849351 20849397 16 98 1.5 8.0 4.8 2.8 145 chr3L 20849252 intron CG32432 - chr3L 20849324 intron CG32432 - chr3L 20849397 intron CG32432 - chr3L_16_20845001 chr3L_20845001 RAL-908 1710 chr3L 20913749 20913768 chr3L 20913851 20913870 4 102 4.0 4.5 4.2 0.8 121 chr3L 20913749 intergenic CR43930 - chr3L 20913810 intergenic CR43930 - chr3L 20913870 intergenic CR43930 - chr3L_4_20910001 chr3L_20910001 RAL-908 1711 chr3L 20931798 20931816 chr3L 20931905 20931913 17 106 4.0 0.5 2.2 5.3 115 chr3L 20931798 intron fng - chr3L 20931856 intron fng - chr3L 20931913 intron fng - chr3L_17_20930001 chr3L_20930001 RAL-908 1712 chr3L 20970918 20970919 chr3L 24821493 24821494 4 3850575 20.0 5.0 12.5 0.3 3850576 chr3L 20970918 exon CG33286 - chr3L 22896206 5` UTR CR44688 + chr3L 24821494 intergenic not near genes chr3L_4_22895001 chr3L_22895001 RAL-908 1713 chr3L 21014897 21014946 chr3L 21023398 21023438 Tirant 7 8496 4.0 3.5 3.8 1.5 8541 chr3L 21014897 intron skd - chr3L 21019168 intron skd - chr3L 21023438 intron skd - chr3L_7_21015001 chr3L_21015001 RAL-908 1714 chr3L 21039665 21039714 chr3L 21039776 21039825 13 110 2.0 4.0 3.0 3.2 160 chr3L 21039665 intron siz + chr3L 21039745 intron siz + chr3L 21039825 intron siz + chr3L_13_21035001 chr3L_21035001 RAL-908 1715 chr3L 21082193 21082238 chr3L 21082291 21082336 13 97 2.5 4.5 3.5 2.9 143 chr3L 21082193 intron ko - chr3L 21082264 intron ko - chr3L 21082336 intron ko - chr3L_13_21080001 chr3L_21080001 RAL-908 1716 chr3L 21151845 21151895 chr3L 21156949 21156999 flea 21 5103 3.0 2.5 2.8 5.5 5154 chr3L 21151845 intron Ac78C - chr3L 21154422 intron Ac78C - chr3L 21156999 intron Ac78C - chr3L_21_21150001 chr3L_21150001 RAL-908 1717 chr3L 21158507 21158551 chr3L 21158659 21158693 12 154 3.5 4.0 3.8 2.5 186 chr3L 21158507 intron Ac78C - chr3L 21158600 intron Ac78C - chr3L 21158693 intron Ac78C - chr3L_12_21155001 chr3L_21155001 RAL-908 1718 chr3L 21161408 21161459 chr3L 21161507 21161558 12 99 4.0 4.0 4.0 2.4 150 chr3L 21161408 intron Ac78C - chr3L 21161483 intron Ac78C - chr3L 21161558 intron Ac78C - chr3L_12_21160001 chr3L_21160001 RAL-908 1719 chr3L 21251520 21251564 chr3L 21251624 21251668 4 104 3.5 2.0 2.8 1.1 148 chr3L 21251520 intron Eip78C + chr3L 21251594 intron Eip78C + chr3L 21251668 intron Eip78C + chr3L_4_21250001 chr3L_21250001 RAL-908 1720 chr3L 21306129 21306180 chr3L 21315307 21315344 roo 17 9176 2.0 3.0 2.5 4.9 9215 chr3L 21306129 3` UTR CG7632 + chr3L 21310736 intron Pc - chr3L 21315344 3` UTR Pc - chr3L_17_21310001 chr3L_21310001 RAL-908 1721 chr3L 21406975 21407025 chr3L 21407074 21407120 7 97 6.5 3.5 5.0 1.2 145 chr3L 21406975 intron rgn + chr3L 21407048 intron rgn + chr3L 21407120 intron rgn + chr3L_7_21405001 chr3L_21405001 RAL-908 1722 chr3L 21412739 21412778 chr3L 21412822 21412876 9 96 2.0 0.5 1.2 4.1 137 chr3L 21412739 intron rgn + chr3L 21412808 intron rgn + chr3L 21412876 intron rgn + chr3L_9_21410001 chr3L_21410001 RAL-908 1723 chr3L 21415127 21415165 chr3L 21415228 21415268 12 102 1.5 6.5 4.0 2.4 141 chr3L 21415127 intron rgn + chr3L 21415198 intron rgn + chr3L 21415268 intron rgn + chr3L_12_21415001 chr3L_21415001 RAL-908 1724 chr3L 4341332 4341333 chr3L 21448026 21448026 7 17106694 20.5 18.5 19.5 0.3 17106694 chr3L 4341332 intron Cip4 - chr3L 12894679 3` UTR CG14118 + chr3L 21448026 3` UTR Syx7 + chr3L_7_12890001 chr3L_12890001 RAL-908 1725 chr3L 4341332 4341337 chr3L 21448027 21448027 10 17106694 19.5 18.5 19.0 0.5 17106695 chr3L 4341332 intron Cip4 - chr3L 12894680 3` UTR CG14118 + chr3L 21448027 3` UTR Syx7 + chr3L_10_12890001 chr3L_12890001 RAL-908 1726 chr3L 21458321 21458340 chr3L 21458436 21458443 INE-1 12 114 11.5 2.0 6.8 1.5 122 chr3L 21458321 intergenic not near genes chr3L 21458382 intergenic not near genes chr3L 21458443 intergenic not near genes chr3L_12_21455001 chr3L_21455001 RAL-908 1727 chr3L 21501155 21501168 chr3L 21501269 21501281 1360 4 114 7.0 14.5 10.8 0.3 126 chr3L 21501155 intron Glg1 - chr3L 21501218 intron Glg1 - chr3L 21501281 intron Glg1 - chr3L_4_21500001 chr3L_21500001 RAL-908 1728 chr3L 21749316 21749340 chr3L 21754479 21754520 Doc 4 5175 2.5 5.0 3.8 0.8 5204 chr3L 21749316 intron Syn1 - chr3L 21751918 intron Syn1 - chr3L 21754520 intron Syn1 - chr3L_4_21750001 chr3L_21750001 RAL-908 1729 chr3L 21769035 21769081 chr3L 21769142 21769188 10 107 2.0 3.5 2.8 2.6 153 chr3L 21769035 intron,intron Syn1 -,CG42689 + chr3L 21769112 intron,intron Syn1 -,CG42689 + chr3L 21769188 intron,intron Syn1 -,CG42689 + chr3L_10_21765001 chr3L_21765001 RAL-908 1730 chr3L 21776668 21776703 chr3L 21776775 21776810 10 106 2.5 3.0 2.8 2.6 142 chr3L 21776668 intron,intron CG42689 +,CG42552 + chr3L 21776739 intron,intron CG42689 +,CG42552 + chr3L 21776810 intron,intron CG42689 +,CG42552 + chr3L_10_21775001 chr3L_21775001 RAL-908 1731 chr3L 21836708 21836759 chr3L 21836814 21836865 18 106 5.0 6.0 5.5 2.8 157 chr3L 21836708 3` UTR P5CDh1 - chr3L 21836786 3` UTR P5CDh1 - chr3L 21836865 3` UTR P5CDh1 - chr3L_18_21835001 chr3L_21835001 RAL-908 1732 chr3L 21849479 21849531 chr3L 21849581 21849633 14 102 2.0 4.5 3.2 3.3 154 chr3L 21849479 intron mub + chr3L 21849556 intron mub + chr3L 21849633 intron mub + chr3L_14_21845001 chr3L_21845001 RAL-908 1733 chr3L 21852238 21852274 chr3L 21852351 21852367 8 106 3.5 1.5 2.5 2.3 129 chr3L 21852238 intron mub + chr3L 21852302 intron mub + chr3L 21852367 intron mub + chr3L_8_21850001 chr3L_21850001 RAL-908 1734 chr3L 21871559 21871593 chr3L 21871667 21871673 9 104 2.0 1.5 1.8 3.2 114 chr3L 21871559 intron mub + chr3L 21871616 intron mub + chr3L 21871673 intron mub + chr3L_9_21870001 chr3L_21870001 RAL-908 1735 chr3L 21874980 21875026 chr3L 21875157 21875203 17 177 4.5 4.5 4.5 3.1 223 chr3L 21874980 intron mub + chr3L 21875092 intron mub + chr3L 21875203 intron mub + chr3L_17_21875001 chr3L_21875001 RAL-908 1736 chr3L 21901017 21901045 chr3L 21901130 21901158 8 112 3.5 3.5 3.5 1.8 141 chr3L 21901017 intron mub + chr3L 21901088 intron mub + chr3L 21901158 intron mub + chr3L_8_21900001 chr3L_21900001 RAL-908 1737 chr3L 21952435 21952480 chr3L 21953198 21953243 transib1 14 763 4.0 5.0 4.5 2.5 808 chr3L 21952435 intergenic not near genes chr3L 21952839 intergenic not near genes chr3L 21953243 intergenic not near genes chr3L_14_21950001 chr3L_21950001 RAL-908 1738 chr3L 22016347 22016401 chr3L 22016483 22016537 8 131 1.5 3.0 2.2 2.5 190 chr3L 22016347 intergenic not near genes chr3L 22016442 intergenic not near genes chr3L 22016537 intergenic not near genes chr3L_8_22015001 chr3L_22015001 RAL-908 1739 chr3L 22033669 22033720 chr3L 22033767 22033812 17 96 3.0 3.5 3.2 4.0 143 chr3L 22033669 intergenic not near genes chr3L 22033740 intergenic not near genes chr3L 22033812 intergenic not near genes chr3L_17_22030001 chr3L_22030001 RAL-908 1740 chr3L 22046166 22046207 chr3L 22046289 22046325 9 121 1.5 2.0 1.8 3.2 159 chr3L 22046166 intron Oct-TyrR + chr3L 22046246 intron Oct-TyrR + chr3L 22046325 intron Oct-TyrR + chr3L_9_22045001 chr3L_22045001 RAL-908 1741 chr3L 22099658 22099694 chr3L 22105863 22105900 3S18 9 6206 7.5 4.5 6.0 1.3 6242 chr3L 22099658 intergenic not near genes chr3L 22102779 intergenic not near genes chr3L 22105900 intergenic not near genes chr3L_9_22100001 chr3L_22100001 RAL-908 1742 chr3L 22124793 22124806 chr3L 22124896 22124908 4 103 7.5 6.0 6.8 0.5 115 chr3L 22124793 intergenic not near genes chr3L 22124850 intergenic not near genes chr3L 22124908 intergenic not near genes chr3L_4_22120001 chr3L_22120001 RAL-908 1743 chr3L 22137515 22137554 chr3L 22137600 22137650 14 96 4.0 2.0 3.0 3.5 135 chr3L 22137515 intron olf413 + chr3L 22137582 intron olf413 + chr3L 22137650 intron olf413 + chr3L_14_22135001 chr3L_22135001 RAL-908 1744 chr3L 22166435 22166467 chr3L 22166533 22166564 8 98 3.0 0.5 1.8 2.9 129 chr3L 22166435 intron olf413 + chr3L 22166500 intron olf413 + chr3L 22166564 intron olf413 + chr3L_8_22165001 chr3L_22165001 RAL-908 1745 chr3L 22169453 22169489 chr3L 22169566 22169601 11 111 1.0 4.5 2.8 2.9 148 chr3L 22169453 intron olf413 + chr3L 22169527 intron olf413 + chr3L 22169601 intron olf413 + chr3L_11_22165001 chr3L_22165001 RAL-908 1746 chr3L 22447185 22447223 chr3L 22447287 22447334 14 110 4.5 5.0 4.8 2.4 149 chr3L 22447185 intergenic not near genes chr3L 22447260 intergenic not near genes chr3L 22447334 intergenic not near genes chr3L_14_22445001 chr3L_22445001 RAL-908 1747 chr3L 22543066 22543102 chr3L 22543163 22543199 15 97 7.0 5.5 6.2 2.1 133 chr3L 22543066 intergenic not near genes chr3L 22543132 intergenic not near genes chr3L 22543199 intergenic not near genes chr3L_15_22540001 chr3L_22540001 RAL-908 1748 chr3L 22555751 22555792 chr3L 22563239 22563282 blood 7 7488 2.0 0.5 1.2 3.2 7531 chr3L 22555751 intergenic not near genes chr3L 22559516 intergenic not near genes chr3L 22563282 intergenic not near genes chr3L_7_22555001 chr3L_22555001 RAL-908 1749 chr3L 22570409 22570454 chr3L 22570570 22570618 11 163 3.0 4.5 3.8 2.3 209 chr3L 22570409 intergenic not near genes chr3L 22570514 intergenic not near genes chr3L 22570618 intergenic not near genes chr3L_11_22570001 chr3L_22570001 RAL-908 1750 chr3L 22617175 22617221 chr3L 22624647 22624693 blood 11 7472 4.0 6.5 5.2 1.8 7518 chr3L 22617175 intron CG14459 - chr3L 22620934 intron CG14459 - chr3L 22624693 intron CG14459 - chr3L_11_22620001 chr3L_22620001 RAL-908 1751 chr3L 22630718 22630760 chr3L 22630817 22630840 7 96 5.0 2.5 3.8 1.5 122 chr3L 22630718 intron CG14459 - chr3L 22630779 intron CG14459 - chr3L 22630840 intron CG14459 - chr3L_7_22630001 chr3L_22630001 RAL-908 1752 chr3L 22652308 22652351 chr3L 22652457 22652487 9 153 2.5 3.0 2.8 2.4 179 chr3L 22652308 exon CG33772 - chr3L 22652398 intron CG33772 - chr3L 22652487 exon CG33772 - chr3L_9_22650001 chr3L_22650001 RAL-908 1753 chr3L 22761368 22761414 chr3L 22766822 22766868 Ivk 15 5454 4.5 6.0 5.2 2.4 5500 chr3L 22761368 intron SPoCk + chr3L 22764118 intron SPoCk + chr3L 22766868 intron SPoCk + chr3L_15_22760001 chr3L_22760001 RAL-908 1754 chr3L 22865967 22866009 chr3L 22867120 22867162 Doc 12 1153 5.0 3.0 4.0 2.4 1195 chr3L 22865967 intron CG33170 + chr3L 22866564 intron CG33170 + chr3L 22867162 intron CG33170 + chr3L_12_22865001 chr3L_22865001 RAL-908 1755 chr3L 19220633 19220636 chr3L 22908066 22908066 10 3687432 13.5 18.0 15.8 0.6 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_10_21060001 chr3L_21060001 RAL-908 1756 chr3L 20525228 20525230 chr3L 22908066 22908066 51 2382837 17.0 18.0 17.5 2.8 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_51_21715001 chr3L_21715001 RAL-908 1757 chr3L 22908066 22908066 chr3L 24821493 24821494 4 1913428 18.5 5.0 11.8 0.3 1913428 chr3L 22908066 intergenic not near genes chr3L 23864780 intron CG40470 - chr3L 24821494 intergenic not near genes chr3L_4_23860001 chr3L_23860001 RAL-908 1758 chr3L 19220634 19220636 chr3L 22908067 22908067 6 3687432 13.5 18.0 15.8 0.4 3687433 chr3L 19220634 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_6_21060001 chr3L_21060001 RAL-908 1759 chr3L 20525228 20525230 chr3L 22908067 22908067 22 2382837 17.0 18.0 17.5 1.2 2382839 chr3L 20525228 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_22_21715001 chr3L_21715001 RAL-908 1760 chr3L 22980567 22980586 chr3L 22980672 22980682 6 104 3.5 3.0 3.2 1.4 115 chr3L 22980567 intergenic not near genes chr3L 22980624 intergenic not near genes chr3L 22980682 intergenic not near genes chr3L_6_22980001 chr3L_22980001 RAL-908 1761 chr3L 22989846 22989892 chr3L 22996839 22996882 297 11 6993 2.5 1.5 2.0 3.7 7036 chr3L 22989846 intergenic not near genes chr3L 22993364 intergenic not near genes chr3L 22996882 intergenic not near genes chr3L_11_22990001 chr3L_22990001 RAL-908 1762 chr3L 23165896 23165905 chr3L 23173360 23173371 Quasimodo 4 7464 7.0 5.0 6.0 0.6 7475 chr3L 23165896 intergenic not near genes chr3L 23169634 intergenic not near genes chr3L 23173371 intergenic not near genes chr3L_4_23165001 chr3L_23165001 RAL-908 1763 chr3L 23436967 23436996 chr3L 23437134 23437157 6 166 10.0 4.5 7.2 0.7 190 chr3L 23436967 intergenic not near genes chr3L 23437062 intergenic not near genes chr3L 23437157 intergenic not near genes chr3L_6_23435001 chr3L_23435001 RAL-908 1764 chr3L 23468013 23468025 chr3L 23468160 23468172 5 147 36.5 33.0 34.8 0.1 159 chr3L 23468013 intergenic not near genes chr3L 23468092 intergenic not near genes chr3L 23468172 intergenic not near genes chr3L_5_23465001 chr3L_23465001 RAL-908 1765 chr3L 23824003 23824035 chr3L 23824436 23824468 6 432 5.5 2.0 3.8 1.2 465 chr3L 23824003 intergenic not near genes chr3L 23824236 intergenic not near genes chr3L 23824468 intergenic not near genes chr3L_6_23820001 chr3L_23820001 RAL-908 1766 chr3L 23875514 23875547 chr3L 23875615 23875648 6 100 3.5 3.0 3.2 1.4 134 chr3L 23875514 intron CG40470 - chr3L 23875581 intron CG40470 - chr3L 23875648 intron CG40470 - chr3L_6_23875001 chr3L_23875001 RAL-908 1767 chr3L 24012399 24012420 chr3L 24020748 24020781 roo 6 8358 7.5 5.5 6.5 0.8 8382 chr3L 24012399 intergenic not near genes chr3L 24016590 intergenic not near genes chr3L 24020781 intergenic not near genes chr3L_6_24015001 chr3L_24015001 RAL-908 1768 chr3L 24791877 24791915 chr3L 24796676 24796714 Doc 8 4799 7.5 1.5 4.5 1.5 4837 chr3L 24791877 intergenic not near genes chr3L 24794296 intergenic not near genes chr3L 24796714 intergenic not near genes chr3L_8_24790001 chr3L_24790001 RAL-908 1769 chr3L 18198930 18198930 chr3L 24821492 24821492 17 6622562 14.5 4.5 9.5 1.6 6622562 chr3L 18198930 intergenic not near genes chr3L 21510211 intron M6 + chr3L 24821492 intergenic not near genes chr3L_17_21510001 chr3L_21510001 RAL-908 1770 chr3L 20525228 20525230 chr3L 24821492 24821492 15 4296263 17.0 4.5 10.8 1.3 4296264 chr3L 20525228 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821492 intergenic not near genes chr3L_15_22670001 chr3L_22670001 RAL-908 1771 chr3L 18198929 18198931 chr3L 24821493 24821493 15 6622562 15.0 5.0 10.0 1.4 6622564 chr3L 18198929 intergenic not near genes chr3L 21510211 intron M6 + chr3L 24821493 intergenic not near genes chr3L_15_21510001 chr3L_21510001 RAL-908 1772 chr3L 20525228 20525230 chr3L 24821493 24821493 11 4296264 17.0 5.0 11.0 0.9 4296265 chr3L 20525228 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821493 intergenic not near genes chr3L_11_22670001 chr3L_22670001 RAL-908 1773 chr3L 20525227 20525230 chr3L 24821494 24821494 14 4296265 17.0 5.0 11.0 1.2 4296267 chr3L 20525227 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_14_22670001 chr3L_22670001 RAL-908 1774 chr3L 25331622 25331651 chr3L 25331733 25331733 4 104 3.0 1.0 2.0 1.3 111 chr3L 25331622 intergenic not near genes chr3L 25331678 intergenic not near genes chr3L 25331733 intergenic not near genes chr3L_4_25330001 chr3L_25330001 RAL-908 1775 chr3L 25513558 25513607 chr3L 25513657 25513706 9 95 1.0 1.0 1.0 4.5 148 chr3L 25513558 intron CG41343 - chr3L 25513632 intron CG41343 - chr3L 25513706 intron CG41343 - chr3L_9_25510001 chr3L_25510001 RAL-908 1776 chr3L 25627823 25627835 chr3L 25627924 25627936 4 102 4.5 6.5 5.5 0.6 113 chr3L 25627823 intron CG41343 - chr3L 25627880 intron CG41343 - chr3L 25627936 intron CG41343 - chr3L_4_25625001 chr3L_25625001 RAL-908 1777 chr3L 25628487 25628527 chr3L 25633277 25633318 F-element 9 4789 2.0 1.5 1.8 3.2 4831 chr3L 25628487 intron CG41343 - chr3L 25630902 intron CG41343 - chr3L 25633318 intron CG41343 - chr3L_9_25630001 chr3L_25630001 RAL-908 1778 chr3L 26009414 26009452 chr3L 26009517 26009558 8 108 1.5 3.5 2.5 2.3 144 chr3L 26009414 intron CG40178 - chr3L 26009486 intron CG40178 - chr3L 26009558 intron CG40178 - chr3L_8_26005001 chr3L_26005001 RAL-908 1779 chr3L 26694908 26694955 chr3L 26695008 26695036 13 98 4.0 1.5 2.8 3.4 128 chr3L 26694908 intergenic not near genes chr3L 26694972 intergenic not near genes chr3L 26695036 intergenic not near genes chr3L_13_26690001 chr3L_26690001 RAL-908 1780 chr3L 27368859 27368901 chr3L 27369424 27369466 17 561 7.5 4.5 6.0 2.4 607 chr3L 27368859 intron Dbp80 + chr3L 27369162 intron Dbp80 + chr3L 27369466 intron Dbp80 + chr3L_17_27365001 chr3L_27365001 RAL-908 1781 chr3L 27727627 27727660 chr3L 27728754 27728787 G-element 4 1126 2.0 2.5 2.2 1.2 1160 chr3L 27727627 intergenic not near genes chr3L 27728207 intergenic not near genes chr3L 27728787 intergenic not near genes chr3L_4_27725001 chr3L_27725001 RAL-908 1782 chr3L 27980682 27980729 chr3L 27985500 27985545 Doc 5 4818 0.5 4.5 2.5 1.4 4863 chr3L 27980682 intron CG17514 - chr3L 27983114 intron CG17514 - chr3L 27985545 intron CG17514 - chr3L_5_27980001 chr3L_27980001 RAL-908 1783 chr3R 97110 97115 chr3R 99846 99851 18 2736 11.5 19.0 15.2 1.1 2741 chr3R 97110 intergenic not near genes chr3R 98480 intergenic not near genes chr3R 99851 intergenic not near genes chr3R_18_95001 chr3R_95001 RAL-908 1784 chr3R 446064 446092 chr3R 446164 446215 6 114 2.0 2.5 2.2 1.9 151 chr3R 446064 intergenic not near genes chr3R 446140 intergenic not near genes chr3R 446215 intergenic not near genes chr3R_6_445001 chr3R_445001 RAL-908 1785 chr3R 1062378 1062403 chr3R 1062556 1062581 6 178 3.0 3.0 3.0 1.5 203 chr3R 1062378 intron CG15831 + chr3R 1062480 intron CG15831 + chr3R 1062581 intron CG15831 + chr3R_6_1060001 chr3R_1060001 RAL-908 1786 chr3R 1443413 1443459 chr3R 1443509 1443559 7 96 1.0 1.5 1.2 3.2 146 chr3R 1443413 intron CG40155 + chr3R 1443486 intron CG40155 + chr3R 1443559 intron CG40155 + chr3R_7_1440001 chr3R_1440001 RAL-908 1787 chr3R 1939055 1939084 chr3R 1939165 1939198 8 114 1.0 2.5 1.8 2.9 143 chr3R 1939055 intergenic not near genes chr3R 1939126 intergenic not near genes chr3R 1939198 intergenic not near genes chr3R_8_1935001 chr3R_1935001 RAL-908 1788 chr3R 3580986 3581020 chr3R 3581233 3581267 7 246 4.0 3.0 3.5 1.6 281 chr3R 3580986 intron Parp - chr3R 3581126 intron Parp - chr3R 3581267 intron Parp - chr3R_7_3580001 chr3R_3580001 RAL-908 1789 chr3R 3877451 3877497 chr3R 3877612 3877657 10 160 2.0 2.5 2.2 3.1 206 chr3R 3877451 intergenic not near genes chr3R 3877554 intergenic not near genes chr3R 3877657 intergenic not near genes chr3R_10_3875001 chr3R_3875001 RAL-908 1790 chr3R 4105027 4105064 chr3R 4110251 4110288 copia 5 5224 5.5 2.5 4.0 1.0 5261 chr3R 4105027 intergenic not near genes chr3R 4107658 intergenic not near genes chr3R 4110288 intergenic not near genes chr3R_5_4105001 chr3R_4105001 RAL-908 1791 chr3R 4206054 4206102 chr3R 4211649 4211697 mdg3 14 5594 6.5 6.0 6.2 1.9 5643 chr3R 4206054 intron CG14636 - chr3R 4208876 intron CG14636 - chr3R 4211697 intron CG14636 - chr3R_14_4205001 chr3R_4205001 RAL-908 1792 chr3R 4366747 4366790 chr3R 4375149 4375167 roo 17 8401 7.0 10.0 8.5 1.8 8420 chr3R 4366747 3` UTR CG1090 + chr3R 4370957 intergenic not near genes chr3R 4375167 5` UTR CR44922 + chr3R_17_4370001 chr3R_4370001 RAL-908 1793 chr3R 4408399 4408438 chr3R 4412723 4412762 Juan 13 4324 6.0 3.0 4.5 2.4 4363 chr3R 4408399 intron CG32944 - chr3R 4410580 intron CG32944 - chr3R 4412762 intron CG32944 - chr3R_13_4410001 chr3R_4410001 RAL-908 1794 chr3R 4527565 4527610 chr3R 4528133 4528180 10 569 3.5 1.0 2.2 3.1 615 chr3R 4527565 intron CG34357 - chr3R 4527872 intron CG34357 - chr3R 4528180 intron CG34357 - chr3R_10_4525001 chr3R_4525001 RAL-908 1795 chr3R 4555317 4555359 chr3R 4555456 4555496 13 138 2.5 7.0 4.8 2.2 179 chr3R 4555317 intron CG34357 - chr3R 4555406 intron CG34357 - chr3R 4555496 intron CG34357 - chr3R_13_4555001 chr3R_4555001 RAL-908 1796 chr3R 4609526 4609581 chr3R 4610710 4610756 1360 13 1181 5.0 4.5 4.8 2.2 1230 chr3R 4609526 intergenic not near genes chr3R 4610141 intergenic not near genes chr3R 4610756 intergenic not near genes chr3R_13_4610001 chr3R_4610001 RAL-908 1797 chr3R 4635725 4635737 chr3R 4636118 4636130 4 393 24.5 23.5 24.0 0.2 405 chr3R 4635725 intergenic CR45673 + chr3R 4635928 intergenic CR45673 + chr3R 4636130 intergenic CR45673 + chr3R_4_4635001 chr3R_4635001 RAL-908 1798 chr3R 4753229 4753268 chr3R 4757552 4757565 F-element 6 4317 7.0 2.0 4.5 1.1 4336 chr3R 4753229 intron,intron atms +,CG44098 - chr3R 4755397 intron,intron atms +,CG44098 - chr3R 4757565 intron,exon atms +,CG44098 - chr3R_6_4755001 chr3R_4755001 RAL-908 1799 chr3R 4769146 4769189 chr3R 4769244 4769286 12 97 4.0 1.0 2.5 3.4 140 chr3R 4769146 intron,intron atms +,CG44098 - chr3R 4769216 intron,intron atms +,CG44098 - chr3R 4769286 intron,intron atms +,CG44098 - chr3R_12_4765001 chr3R_4765001 RAL-908 1800 chr3R 4784515 4784559 chr3R 4791368 4791412 5 6853 16.0 17.0 16.5 0.3 6897 chr3R 4784515 exon CG17387 - chr3R 4787964 exon ctrip - chr3R 4791412 exon ctrip - chr3R_5_4785001 chr3R_4785001 RAL-908 1801 chr3R 4829944 4829982 chr3R 4830047 4830085 13 103 5.5 3.5 4.5 2.4 141 chr3R 4829944 3` UTR CG14658 - chr3R 4830014 3` UTR CG14658 - chr3R 4830085 exon CG14658 - chr3R_13_4830001 chr3R_4830001 RAL-908 1802 chr3R 4887465 4887502 chr3R 4894857 4894895 rover 9 7392 3.5 2.0 2.8 2.4 7430 chr3R 4887465 intergenic not near genes chr3R 4891180 intergenic not near genes chr3R 4894895 intergenic not near genes chr3R_9_4890001 chr3R_4890001 RAL-908 1803 chr3R 4922322 4922363 chr3R 4922421 4922461 11 97 5.0 0.5 2.8 2.9 139 chr3R 4922322 intron Cdep + chr3R 4922392 intron Cdep + chr3R 4922461 intron Cdep + chr3R_11_4920001 chr3R_4920001 RAL-908 1804 chr3R 4943593 4943623 chr3R 4943718 4943748 12 123 8.0 3.0 5.5 1.8 155 chr3R 4943593 intron Cdep + chr3R 4943670 intron Cdep + chr3R 4943748 intron Cdep + chr3R_12_4940001 chr3R_4940001 RAL-908 1805 chr3R 4965990 4966037 chr3R 4966102 4966149 9 110 2.5 1.5 2.0 3.0 159 chr3R 4965990 intron CG1124 + chr3R 4966070 intron CG1124 + chr3R 4966149 intron CG1124 + chr3R_9_4965001 chr3R_4965001 RAL-908 1806 chr3R 5045826 5045877 chr3R 5052948 5052999 HMS-Beagle 12 7120 8.0 4.0 6.0 1.7 7173 chr3R 5045826 3` UTR CR43635 - chr3R 5049412 intergenic not near genes chr3R 5052999 intergenic CR45588 - chr3R_12_5045001 chr3R_5045001 RAL-908 1807 chr3R 5067965 5068012 chr3R 5073502 5073549 mdg3 14 5536 5.5 4.5 5.0 2.3 5584 chr3R 5067965 intergenic not near genes chr3R 5070757 intergenic not near genes chr3R 5073549 intergenic not near genes chr3R_14_5070001 chr3R_5070001 RAL-908 1808 chr3R 5131329 5131367 chr3R 5131427 5131463 7 97 3.5 5.5 4.5 1.3 134 chr3R 5131329 intergenic not near genes chr3R 5131396 intergenic not near genes chr3R 5131463 intergenic not near genes chr3R_7_5130001 chr3R_5130001 RAL-908 1809 chr3R 5278072 5278115 chr3R 5278173 5278216 17 97 5.0 2.5 3.8 3.5 144 chr3R 5278072 intron mtd - chr3R 5278144 intron mtd - chr3R 5278216 intron mtd - chr3R_17_5275001 chr3R_5275001 RAL-908 1810 chr3R 5282972 5282986 chr3R 5283069 5283076 5 95 2.5 4.0 3.2 1.2 104 chr3R 5282972 intron mtd - chr3R 5283024 intron mtd - chr3R 5283076 intron mtd - chr3R_5_5280001 chr3R_5280001 RAL-908 1811 chr3R 5289235 5289271 chr3R 5289343 5289380 6 106 2.0 1.0 1.5 2.4 145 chr3R 5289235 intron mtd - chr3R 5289308 intron mtd - chr3R 5289380 intron mtd - chr3R_6_5285001 chr3R_5285001 RAL-908 1812 chr3R 5306109 5306160 chr3R 5306215 5306228 15 96 3.5 3.5 3.5 3.3 119 chr3R 5306109 intron mtd - chr3R 5306168 intron mtd - chr3R 5306228 intron mtd - chr3R_15_5305001 chr3R_5305001 RAL-908 1813 chr3R 5338382 5338422 chr3R 5343579 5343619 Rt1c 19 5196 7.5 7.0 7.2 2.3 5237 chr3R 5338382 intron mtd - chr3R 5341000 intron mtd - chr3R 5343619 intron mtd - chr3R_19_5340001 chr3R_5340001 RAL-908 1814 chr3R 5445944 5445994 chr3R 5452424 5452468 Burdock 14 6480 4.0 5.0 4.5 2.5 6524 chr3R 5445944 intron CG14669 + chr3R 5449206 intron CG14669 + chr3R 5452468 intron CG14669 + chr3R_14_5445001 chr3R_5445001 RAL-908 1815 chr3R 5626459 5626473 chr3R 5626557 5626584 5 103 5.0 1.0 3.0 1.2 125 chr3R 5626459 intergenic not near genes chr3R 5626522 intergenic not near genes chr3R 5626584 intergenic not near genes chr3R_5_5625001 chr3R_5625001 RAL-908 1816 chr3R 5626990 5627037 chr3R 5627126 5627173 14 135 3.5 3.0 3.2 3.3 183 chr3R 5626990 intergenic not near genes chr3R 5627082 intergenic not near genes chr3R 5627173 intergenic not near genes chr3R_14_5625001 chr3R_5625001 RAL-908 1817 chr3R 5698117 5698139 chr3R 5698200 5698253 16 111 5.0 4.5 4.8 2.8 136 chr3R 5698117 intron plx + chr3R 5698185 intron plx + chr3R 5698253 intron plx + chr3R_16_5695001 chr3R_5695001 RAL-908 1818 chr3R 5746001 5746046 chr3R 5746262 5746307 pogo 14 260 2.5 4.5 3.5 3.1 306 chr3R 5746001 3` UTR Madm + chr3R 5746154 3` UTR Madm + chr3R 5746307 3` UTR Madm + chr3R_14_5745001 chr3R_5745001 RAL-908 1819 chr3R 5747003 5747014 chr3R 5753214 5753225 diver 5 6211 10.5 4.5 7.5 0.6 6222 chr3R 5747003 intergenic Madm + chr3R 5750114 intergenic not near genes chr3R 5753225 intergenic CG2091 - chr3R_5_5750001 chr3R_5750001 RAL-908 1820 chr3R 5747015 5747040 chr3R 5753204 5753226 diver 15 6204 6.0 4.0 5.0 2.5 6211 chr3R 5747015 intergenic Madm + chr3R 5750120 intergenic not near genes chr3R 5753226 intergenic CG2091 - chr3R_15_5750001 chr3R_5750001 RAL-908 1821 chr3R 5775975 5776022 chr3R 5776135 5776171 13 155 4.0 3.0 3.5 2.9 196 chr3R 5775975 intron CG2082 - chr3R 5776073 intron CG2082 - chr3R 5776171 intron CG2082 - chr3R_13_5775001 chr3R_5775001 RAL-908 1822 chr3R 5809095 5809137 chr3R 5809353 5809398 pogo 6 260 3.0 3.0 3.0 1.5 303 chr3R 5809095 3` UTR CG11000 + chr3R 5809246 3` UTR CG11000 + chr3R 5809398 3` UTR CG11000 + chr3R_6_5805001 chr3R_5805001 RAL-908 1823 chr3R 5822366 5822401 chr3R 5823553 5823588 1360 9 1187 5.0 7.0 6.0 1.3 1222 chr3R 5822366 3` UTR CG2023 - chr3R 5822977 3` UTR CG2023 - chr3R 5823588 3` UTR CG2023 - chr3R_9_5820001 chr3R_5820001 RAL-908 1824 chr3R 5861565 5861587 chr3R 5861664 5861686 11 99 6.0 4.0 5.0 1.8 121 chr3R 5861565 intron CG2017 - chr3R 5861626 intron CG2017 - chr3R 5861686 intron CG2017 - chr3R_11_5860001 chr3R_5860001 RAL-908 1825 chr3R 5927562 5927590 chr3R 5927808 5927831 pogo 9 255 0.0 5.5 2.8 2.4 269 chr3R 5927562 intron CG34113 - chr3R 5927696 intron CG34113 - chr3R 5927831 intron CG34113 - chr3R_9_5925001 chr3R_5925001 RAL-908 1826 chr3R 5943388 5943409 chr3R 5943487 5943508 10 98 2.5 4.5 3.5 2.2 120 chr3R 5943388 intron CG34113 - chr3R 5943448 intron CG34113 - chr3R 5943508 intron CG34113 - chr3R_10_5940001 chr3R_5940001 RAL-908 1827 chr3R 5947944 5947977 chr3R 5948059 5948092 4 115 5.5 3.0 4.2 0.8 148 chr3R 5947944 intron CG34113 - chr3R 5948018 intron CG34113 - chr3R 5948092 intron CG34113 - chr3R_4_5945001 chr3R_5945001 RAL-908 1828 chr3R 6012641 6012677 chr3R 6012739 6012774 14 98 4.0 5.0 4.5 2.5 133 chr3R 6012641 intergenic not near genes chr3R 6012708 intergenic not near genes chr3R 6012774 intergenic not near genes chr3R_14_6010001 chr3R_6010001 RAL-908 1829 chr3R 6015955 6015988 chr3R 6024444 6024489 Tirant 4 8496 4.5 2.5 3.5 0.9 8534 chr3R 6015955 intergenic not near genes chr3R 6020222 intergenic not near genes chr3R 6024489 intergenic not near genes chr3R_4_6020001 chr3R_6020001 RAL-908 1830 chr3R 6059857 6059890 chr3R 6059962 6059995 5 105 4.5 5.5 5.0 0.8 138 chr3R 6059857 intergenic not near genes chr3R 6059926 intergenic not near genes chr3R 6059995 intergenic not near genes chr3R_5_6055001 chr3R_6055001 RAL-908 1831 chr3R 6080132 6080182 chr3R 6080239 6080292 10 109 0.0 1.0 0.5 6.7 160 chr3R 6080132 intergenic not near genes chr3R 6080212 intergenic not near genes chr3R 6080292 intergenic not near genes chr3R_10_6080001 chr3R_6080001 RAL-908 1832 chr3R 6119110 6119157 chr3R 6119216 6119263 21 106 5.5 2.5 4.0 4.2 153 chr3R 6119110 intergenic not near genes chr3R 6119186 intergenic not near genes chr3R 6119263 intergenic not near genes chr3R_21_6115001 chr3R_6115001 RAL-908 1833 chr3R 6121164 6121180 chr3R 6121402 6121418 BS 9 238 0.0 11.0 5.5 1.4 254 chr3R 6121164 intergenic not near genes chr3R 6121291 intergenic not near genes chr3R 6121418 intergenic not near genes chr3R_9_6120001 chr3R_6120001 RAL-908 1834 chr3R 6158503 6158530 chr3R 6167105 6167112 Tirant 4 8597 4.0 2.0 3.0 1.0 8609 chr3R 6158503 intergenic not near genes chr3R 6162808 intergenic not near genes chr3R 6167112 intergenic CG1077 + chr3R_4_6160001 chr3R_6160001 RAL-908 1835 chr3R 6175157 6175206 chr3R 6182449 6182498 HMS-Beagle2 13 7289 1.5 2.5 2.0 4.3 7341 chr3R 6175157 intergenic Osi1 + chr3R 6178828 intron CR45194 + chr3R 6182498 intergenic CR45194 + chr3R_13_6175001 chr3R_6175001 RAL-908 1836 chr3R 6191152 6191199 chr3R 6191252 6191299 15 98 5.5 4.5 5.0 2.5 147 chr3R 6191152 intron NPFR + chr3R 6191226 intron NPFR + chr3R 6191299 intron NPFR + chr3R_15_6190001 chr3R_6190001 RAL-908 1837 chr3R 6460212 6460245 chr3R 6460386 6460419 6 164 3.5 4.0 3.8 1.2 207 chr3R 6460212 intergenic not near genes chr3R 6460316 intergenic not near genes chr3R 6460419 intergenic not near genes chr3R_6_6460001 chr3R_6460001 RAL-908 1838 chr3R 6461556 6461612 chr3R 6461657 6461712 12 100 2.0 3.5 2.8 3.2 156 chr3R 6461556 intergenic not near genes chr3R 6461634 intergenic not near genes chr3R 6461712 intergenic not near genes chr3R_12_6460001 chr3R_6460001 RAL-908 1839 chr3R 6510009 6510046 chr3R 6515110 6515146 jockey 9 5100 6.0 4.5 5.2 1.5 5137 chr3R 6510009 intergenic not near genes chr3R 6512578 intergenic not near genes chr3R 6515146 intergenic not near genes chr3R_9_6510001 chr3R_6510001 RAL-908 1840 chr3R 6541216 6541250 chr3R 6541458 6541492 10 242 4.5 4.0 4.2 1.9 276 chr3R 6541216 intron dpr11 - chr3R 6541354 intron dpr11 - chr3R 6541492 intron dpr11 - chr3R_10_6540001 chr3R_6540001 RAL-908 1841 chr3R 6578862 6578911 chr3R 6579002 6579051 9 137 3.5 1.0 2.2 2.8 189 chr3R 6578862 intron dpr11 - chr3R 6578956 intron dpr11 - chr3R 6579051 intron dpr11 - chr3R_9_6575001 chr3R_6575001 RAL-908 1842 chr3R 6737484 6737528 chr3R 6739291 6739322 Doc 9 1805 0.5 2.5 1.5 3.6 1838 chr3R 6737484 intron pb - chr3R 6738403 intron pb - chr3R 6739322 intron pb - chr3R_9_6735001 chr3R_6735001 RAL-908 1843 chr3R 6891221 6891268 chr3R 6891317 6891364 5 92 3.0 3.0 3.0 1.2 143 chr3R 6891221 intergenic not near genes chr3R 6891292 intergenic not near genes chr3R 6891364 intergenic not near genes chr3R_5_6890001 chr3R_6890001 RAL-908 1844 chr3R 6978862 6978914 chr3R 6978967 6979019 13 103 3.0 4.0 3.5 2.9 157 chr3R 6978862 intron Antp - chr3R 6978940 intron Antp - chr3R 6979019 intron Antp - chr3R_13_6975001 chr3R_6975001 RAL-908 1845 chr3R 7060236 7060286 chr3R 7060337 7060382 16 100 2.5 2.0 2.2 5.0 146 chr3R 7060236 3` UTR dj + chr3R 7060309 3` UTR dj + chr3R 7060382 3` UTR dj + chr3R_16_7060001 chr3R_7060001 RAL-908 1846 chr3R 7092774 7092818 chr3R 7093347 7093362 11 577 3.0 3.5 3.2 2.6 588 chr3R 7092774 3` UTR CR43685 - chr3R 7093068 intron CR43685 - chr3R 7093362 3` UTR CR43685 - chr3R_11_7090001 chr3R_7090001 RAL-908 1847 chr3R 7103263 7103314 chr3R 7103359 7103408 12 91 5.0 2.5 3.8 2.5 145 chr3R 7103263 intron Alh - chr3R 7103336 intron Alh - chr3R 7103408 intron Alh - chr3R_12_7100001 chr3R_7100001 RAL-908 1848 chr3R 7121724 7121735 chr3R 7121827 7121838 5 103 6.0 6.5 6.2 0.7 114 chr3R 7121724 exon Alh - chr3R 7121781 intron Alh - chr3R 7121838 intron Alh - chr3R_5_7120001 chr3R_7120001 RAL-908 1849 chr3R 7126488 7126534 chr3R 7126603 7126649 16 112 4.5 5.5 5.0 2.7 161 chr3R 7126488 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126568 3` UTR CG10068 - chr3R 7126649 3` UTR CG10068 - chr3R_16_7125001 chr3R_7125001 RAL-908 1850 chr3R 7173658 7173707 chr3R 7173758 7173807 15 100 3.5 5.5 4.5 2.7 149 chr3R 7173658 intron sas + chr3R 7173732 intron sas + chr3R 7173807 intron sas + chr3R_15_7170001 chr3R_7170001 RAL-908 1851 chr3R 7270917 7270964 chr3R 7271021 7271068 13 104 2.5 5.0 3.8 2.7 151 chr3R 7270917 intergenic Syt4 + chr3R 7270992 intergenic Syt4 + chr3R 7271068 intergenic Syt4 + chr3R_13_7270001 chr3R_7270001 RAL-908 1852 chr3R 7410603 7410616 chr3R 7410705 7410718 4 102 3.5 8.5 6.0 0.6 115 chr3R 7410603 intergenic not near genes chr3R 7410660 intergenic not near genes chr3R 7410718 intergenic not near genes chr3R_4_7410001 chr3R_7410001 RAL-908 1853 chr3R 7418037 7418088 chr3R 7418374 7418425 14 337 2.5 3.0 2.8 3.7 388 chr3R 7418037 intergenic not near genes chr3R 7418231 intergenic not near genes chr3R 7418425 intergenic not near genes chr3R_14_7415001 chr3R_7415001 RAL-908 1854 chr3R 7438914 7438930 chr3R 7439007 7439028 4 96 4.0 3.0 3.5 0.9 114 chr3R 7438914 intergenic not near genes chr3R 7438971 intergenic not near genes chr3R 7439028 intergenic not near genes chr3R_4_7435001 chr3R_7435001 RAL-908 1855 chr3R 7447973 7448007 chr3R 7448069 7448105 14 96 6.0 5.0 5.5 2.2 132 chr3R 7447973 intergenic not near genes chr3R 7448039 intergenic not near genes chr3R 7448105 intergenic not near genes chr3R_14_7445001 chr3R_7445001 RAL-908 1856 chr3R 7589779 7589821 chr3R 7589920 7589960 12 140 2.5 5.0 3.8 2.5 181 chr3R 7589779 intron CG34127 - chr3R 7589870 intron CG34127 - chr3R 7589960 intron CG34127 - chr3R_12_7585001 chr3R_7585001 RAL-908 1857 chr3R 7619956 7619995 chr3R 7620065 7620104 11 107 4.5 6.0 5.2 1.8 148 chr3R 7619956 intron CG34127 - chr3R 7620030 intron CG34127 - chr3R 7620104 intron CG34127 - chr3R_11_7620001 chr3R_7620001 RAL-908 1858 chr3R 7625280 7625319 chr3R 7625748 7625787 7 468 2.5 4.0 3.2 1.7 507 chr3R 7625280 intron CG34127 - chr3R 7625534 intron CG34127 - chr3R 7625787 intron CG34127 - chr3R_7_7625001 chr3R_7625001 RAL-908 1859 chr3R 7654994 7655037 chr3R 7655096 7655136 9 101 3.5 3.5 3.5 2.0 142 chr3R 7654994 intergenic not near genes chr3R 7655065 intergenic not near genes chr3R 7655136 intergenic not near genes chr3R_9_7655001 chr3R_7655001 RAL-908 1860 chr3R 7677899 7677922 chr3R 7678032 7678055 4 133 6.5 2.0 4.2 0.8 156 chr3R 7677899 intron Nlg1 + chr3R 7677977 intron Nlg1 + chr3R 7678055 intron Nlg1 + chr3R_4_7675001 chr3R_7675001 RAL-908 1861 chr3R 7677928 7677945 chr3R 7678030 7678078 6 122 1.5 2.0 1.8 2.1 150 chr3R 7677928 intron Nlg1 + chr3R 7678003 intron Nlg1 + chr3R 7678078 intron Nlg1 + chr3R_6_7675001 chr3R_7675001 RAL-908 1862 chr3R 7694566 7694600 chr3R 7713647 7713674 invader3 5 19080 3.5 2.0 2.8 1.3 19108 chr3R 7694566 3` UTR Nlg1 + chr3R 7704120 intergenic not near genes chr3R 7713674 intergenic not near genes chr3R_5_7700001 chr3R_7700001 RAL-908 1863 chr3R 7729445 7729496 chr3R 7737403 7737454 Stalker2 19 7957 4.0 3.5 3.8 4.0 8009 chr3R 7729445 intergenic not near genes chr3R 7733450 intergenic not near genes chr3R 7737454 intergenic not near genes chr3R_19_7730001 chr3R_7730001 RAL-908 1864 chr3R 7857631 7857670 chr3R 7857732 7857773 15 102 3.5 5.5 4.5 2.7 142 chr3R 7857631 3` UTR CG17816 - chr3R 7857702 3` UTR CG17816 - chr3R 7857773 3` UTR CG17816 - chr3R_15_7855001 chr3R_7855001 RAL-908 1865 chr3R 7773344 7773344 chr3R 7890530 7890535 9 117190 19.5 11.5 15.5 0.5 117191 chr3R 7773344 intergenic not near genes chr3R 7831940 intron CG34384 + chr3R 7890535 intron mRpS9 - chr3R_9_7830001 chr3R_7830001 RAL-908 1866 chr3R 7973306 7973339 chr3R 7974388 7974421 1360 10 1082 6.5 4.0 5.2 1.6 1115 chr3R 7973306 intergenic not near genes chr3R 7973864 intergenic not near genes chr3R 7974421 3` UTR CD98hc - chr3R_10_7970001 chr3R_7970001 RAL-908 1867 chr3R 8042098 8042182 chr3R 8042243 8042362 4 155 0.0 3.0 1.5 1.6 264 chr3R 8042098 intron CG43060 + chr3R 8042230 intron CG43060 + chr3R 8042362 intron CG43060 + chr3R_4_8040001 chr3R_8040001 RAL-908 1868 chr3R 8053418 8053460 chr3R 8053652 8053703 11 240 3.0 3.5 3.2 2.6 285 chr3R 8053418 intron CG43060 + chr3R 8053560 intron CG43060 + chr3R 8053703 intron CG43060 + chr3R_11_8050001 chr3R_8050001 RAL-908 1869 chr3R 8090251 8090300 chr3R 8090448 8090497 15 197 4.0 3.0 3.5 3.3 246 chr3R 8090251 5` UTR CR44330 + chr3R 8090374 intergenic CR44330 + chr3R 8090497 intergenic CR44330 + chr3R_15_8090001 chr3R_8090001 RAL-908 1870 chr3R 8090545 8090571 chr3R 8094042 8094057 297 5 3495 4.0 7.5 5.8 0.7 3512 chr3R 8090545 intergenic CR44330 + chr3R 8092301 intergenic not near genes chr3R 8094057 intergenic CG7900 + chr3R_5_8090001 chr3R_8090001 RAL-908 1871 chr3R 8094391 8094435 chr3R 8099715 8099760 Transpac 11 5325 7.0 7.5 7.2 1.3 5369 chr3R 8094391 intron CG7900 + chr3R 8097076 intron CG7900 + chr3R 8099760 intron CG7900 + chr3R_11_8095001 chr3R_8095001 RAL-908 1872 chr3R 8101769 8101791 chr3R 8104851 8104885 G2 8 3093 1.5 3.5 2.5 2.3 3116 chr3R 8101769 exon CG7900 + chr3R 8103327 intron CG7900 + chr3R 8104885 3` UTR CG7900 + chr3R_8_8100001 chr3R_8100001 RAL-908 1873 chr3R 8144746 8144759 chr3R 8144850 8144855 4 102 7.5 2.5 5.0 0.7 109 chr3R 8144746 intergenic not near genes chr3R 8144800 intergenic not near genes chr3R 8144855 intergenic not near genes chr3R_4_8140001 chr3R_8140001 RAL-908 1874 chr3R 8182637 8182681 chr3R 8182751 8182795 9 111 2.5 5.0 3.8 1.9 158 chr3R 8182637 intergenic not near genes chr3R 8182716 intergenic not near genes chr3R 8182795 intergenic not near genes chr3R_9_8180001 chr3R_8180001 RAL-908 1875 chr3R 8196744 8196783 chr3R 8196856 8196895 13 110 2.5 5.0 3.8 2.7 151 chr3R 8196744 intergenic not near genes chr3R 8196820 intergenic CR43302 - chr3R 8196895 intergenic CR43302 - chr3R_13_8195001 chr3R_8195001 RAL-908 1876 chr3R 8207558 8207569 chr3R 8208423 8208434 F-element 4 865 3.5 2.5 3.0 1.0 876 chr3R 8207558 intergenic not near genes chr3R 8207996 intergenic not near genes chr3R 8208434 intergenic not near genes chr3R_4_8205001 chr3R_8205001 RAL-908 1877 chr3R 8339241 8339247 chr3R 21907534 21907536 5 13568290 14.0 19.0 16.5 0.3 13568295 chr3R 8339241 intergenic not near genes chr3R 15123388 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_5_15120001 chr3R_15120001 RAL-908 1878 chr3R 8402989 8403031 chr3R 8412175 8412213 roo 10 9180 3.0 4.0 3.5 2.2 9224 chr3R 8402989 intron CG45263 - chr3R 8407601 intron CG45263 - chr3R 8412213 intron CG45263 - chr3R_10_8405001 chr3R_8405001 RAL-908 1879 chr3R 8570467 8570476 chr3R 8575123 8575132 HMS-Beagle 5 4656 7.0 5.5 6.2 0.7 4665 chr3R 8570467 intergenic not near genes chr3R 8572800 intergenic not near genes chr3R 8575132 intergenic not near genes chr3R_5_8570001 chr3R_8570001 RAL-908 1880 chr3R 8570483 8570509 chr3R 8575113 8575158 HMS-Beagle 7 4649 3.5 4.0 3.8 1.5 4675 chr3R 8570483 intergenic not near genes chr3R 8572820 intergenic not near genes chr3R 8575158 intergenic not near genes chr3R_7_8570001 chr3R_8570001 RAL-908 1881 chr3R 8575906 8575955 chr3R 8576009 8576058 13 98 6.0 2.0 4.0 2.6 152 chr3R 8575906 intergenic not near genes chr3R 8575982 intergenic not near genes chr3R 8576058 intergenic not near genes chr3R_13_8575001 chr3R_8575001 RAL-908 1882 chr3R 8601766 8601797 chr3R 8610939 8610969 roo 9 9172 5.0 5.5 5.2 1.5 9203 chr3R 8601766 intron 5-HT2B + chr3R 8606368 intron 5-HT2B + chr3R 8610969 intron 5-HT2B + chr3R_9_8605001 chr3R_8605001 RAL-908 1883 chr3R 8638043 8638087 chr3R 8638173 8638218 12 130 2.0 3.5 2.8 3.2 175 chr3R 8638043 intergenic not near genes chr3R 8638130 intergenic not near genes chr3R 8638218 intergenic not near genes chr3R_12_8635001 chr3R_8635001 RAL-908 1884 chr3R 8639667 8639715 chr3R 8639769 8639812 16 101 2.5 0.5 1.5 6.4 145 chr3R 8639667 intergenic not near genes chr3R 8639740 intergenic not near genes chr3R 8639812 intergenic not near genes chr3R_16_8635001 chr3R_8635001 RAL-908 1885 chr3R 8685275 8685306 chr3R 8685395 8685426 9 120 5.5 6.0 5.8 1.3 151 chr3R 8685275 intron CR44937 - chr3R 8685350 intron CR44937 - chr3R 8685426 intron CR44937 - chr3R_9_8685001 chr3R_8685001 RAL-908 1886 chr3R 8707343 8707381 chr3R 8709804 8709835 jockey 10 2459 0.5 2.5 1.5 4.0 2492 chr3R 8707343 intergenic not near genes chr3R 8708589 intergenic not near genes chr3R 8709835 intergenic not near genes chr3R_10_8705001 chr3R_8705001 RAL-908 1887 chr3R 8821230 8821275 chr3R 8821350 8821395 9 118 2.5 7.0 4.8 1.6 165 chr3R 8821230 intergenic CR43130 + chr3R 8821312 intergenic CR43130 + chr3R 8821395 intergenic CR43130 + chr3R_9_8820001 chr3R_8820001 RAL-908 1888 chr3R 8837675 8837698 chr3R 8837777 8837801 8 101 7.0 5.0 6.0 1.1 126 chr3R 8837675 intron pyd - chr3R 8837738 intron pyd - chr3R 8837801 intron pyd - chr3R_8_8835001 chr3R_8835001 RAL-908 1889 chr3R 8894853 8894906 chr3R 8896029 8896067 1360 20 1175 3.5 4.0 3.8 4.2 1214 chr3R 8894853 intron pyd - chr3R 8895460 intron pyd - chr3R 8896067 intron pyd - chr3R_20_8895001 chr3R_8895001 RAL-908 1890 chr3R 8979863 8979916 chr3R 8979966 8980019 16 102 3.0 2.5 2.8 4.2 156 chr3R 8979863 intergenic not near genes chr3R 8979941 intergenic not near genes chr3R 8980019 intergenic not near genes chr3R_16_8975001 chr3R_8975001 RAL-908 1891 chr3R 9036354 9036399 chr3R 9036452 9036497 24 98 4.0 7.0 5.5 3.7 143 chr3R 9036354 intron neur - chr3R 9036426 intron neur - chr3R 9036497 intron neur - chr3R_24_9035001 chr3R_9035001 RAL-908 1892 chr3R 9043716 9043741 chr3R 9043824 9043849 5 108 6.5 3.5 5.0 0.8 133 chr3R 9043716 intron Nmdmc - chr3R 9043782 intron Nmdmc - chr3R 9043849 intron Nmdmc - chr3R_5_9040001 chr3R_9040001 RAL-908 1893 chr3R 9082024 9082063 chr3R 9082138 9082177 8 112 4.0 4.5 4.2 1.5 153 chr3R 9082024 intron pum - chr3R 9082100 intron pum - chr3R 9082177 intron pum - chr3R_8_9080001 chr3R_9080001 RAL-908 1894 chr3R 9095278 9095314 chr3R 9095385 9095421 14 107 5.0 4.5 4.8 2.4 143 chr3R 9095278 intron pum - chr3R 9095350 intron pum - chr3R 9095421 intron pum - chr3R_14_9095001 chr3R_9095001 RAL-908 1895 chr3R 9101827 9101869 chr3R 9101939 9101987 12 117 5.0 4.5 4.8 2.1 160 chr3R 9101827 intron pum - chr3R 9101907 intron pum - chr3R 9101987 intron pum - chr3R_12_9100001 chr3R_9100001 RAL-908 1896 chr3R 9108845 9108883 chr3R 9108941 9108979 11 96 5.0 3.0 4.0 2.2 134 chr3R 9108845 intron pum - chr3R 9108912 intron pum - chr3R 9108979 intron pum - chr3R_11_9105001 chr3R_9105001 RAL-908 1897 chr3R 9179478 9179518 chr3R 9181143 9181186 8 1668 2.0 4.0 3.0 2.0 1708 chr3R 9179478 intron pum - chr3R 9180332 intron pum - chr3R 9181186 intron pum - chr3R_8_9180001 chr3R_9180001 RAL-908 1898 chr3R 9319558 9319569 chr3R 9320013 9320024 jockey 6 455 9.5 4.5 7.0 0.8 466 chr3R 9319558 intron CG8861 - chr3R 9319791 intron CG8861 - chr3R 9320024 intron CG8861 - chr3R_6_9315001 chr3R_9315001 RAL-908 1899 chr3R 9319570 9319600 chr3R 9320011 9320055 jockey 11 454 4.5 4.0 4.2 2.1 485 chr3R 9319570 intron CG8861 - chr3R 9319812 intron CG8861 - chr3R 9320055 intron CG8861 - chr3R_11_9315001 chr3R_9315001 RAL-908 1900 chr3R 9330038 9330039 chr3R 18955051 18955052 13 9625013 16.0 17.0 16.5 0.7 9625014 chr3R 9330038 intron CG12951 - chr3R 14142545 intergenic not near genes chr3R 18955052 intron,intron CG42613 +,CG43732 + chr3R_13_14140001 chr3R_14140001 RAL-908 1901 chr3R 9361807 9361845 chr3R 9362068 9362086 pogo 11 259 4.5 5.5 5.0 1.8 279 chr3R 9361807 3` UTR CG45050 + chr3R 9361946 3` UTR CG45050 + chr3R 9362086 3` UTR CG45050 + chr3R_11_9360001 chr3R_9360001 RAL-908 1902 chr3R 9362956 9363006 chr3R 9363065 9363115 13 105 2.5 3.0 2.8 3.4 159 chr3R 9362956 3` UTR CG45050 + chr3R 9363036 intergenic CG45050 +,CG18473 + chr3R 9363115 intergenic CG45050 +,CG18473 + chr3R_13_9360001 chr3R_9360001 RAL-908 1903 chr3R 9384732 9384781 chr3R 9384878 9384913 11 143 2.0 4.0 3.0 2.8 181 chr3R 9384732 intron FER - chr3R 9384822 intron FER - chr3R 9384913 intron FER - chr3R_11_9380001 chr3R_9380001 RAL-908 1904 chr3R 9390514 9390563 chr3R 9390618 9390667 12 101 2.0 3.5 2.8 3.2 153 chr3R 9390514 intron FER - chr3R 9390590 intron FER - chr3R 9390667 intron FER - chr3R_12_9390001 chr3R_9390001 RAL-908 1905 chr3R 9496947 9496981 chr3R 9497076 9497110 15 129 4.5 9.0 6.8 1.9 163 chr3R 9496947 intergenic CG8147 +,RhoL - chr3R 9497028 intergenic RhoL -,CG8147 + chr3R 9497110 intergenic RhoL -,CG8147 + chr3R_15_9495001 chr3R_9495001 RAL-908 1906 chr3R 9822292 9822333 chr3R 9822504 9822545 11 212 6.5 1.5 4.0 2.2 253 chr3R 9822292 intergenic not near genes chr3R 9822418 intergenic not near genes chr3R 9822545 intergenic CG34302 - chr3R_11_9820001 chr3R_9820001 RAL-908 1907 chr3R 9885633 9885650 chr3R 9885737 9885754 5 104 3.0 8.5 5.8 0.7 121 chr3R 9885633 intron Glut4EF + chr3R 9885694 intron Glut4EF + chr3R 9885754 intron Glut4EF + chr3R_5_9885001 chr3R_9885001 RAL-908 1908 chr3R 9898774 9898819 chr3R 9898886 9898922 10 109 2.0 4.5 3.2 2.4 148 chr3R 9898774 intron Glut4EF + chr3R 9898848 intron Glut4EF + chr3R 9898922 intron Glut4EF + chr3R_10_9895001 chr3R_9895001 RAL-908 1909 chr3R 10078497 10078547 chr3R 10078644 10078694 26 145 3.0 3.0 3.0 6.5 197 chr3R 10078497 intergenic not near genes chr3R 10078596 intergenic not near genes chr3R 10078694 intergenic not near genes chr3R_26_10075001 chr3R_10075001 RAL-908 1910 chr3R 10085934 10085978 chr3R 10086252 10086296 12 317 1.5 2.5 2.0 4.0 362 chr3R 10085934 intron CR45054 + chr3R 10086115 intron CR45054 + chr3R 10086296 intron CR45054 + chr3R_12_10085001 chr3R_10085001 RAL-908 1911 chr3R 10183086 10183102 chr3R 10183183 10183199 6 97 2.5 2.5 2.5 1.7 113 chr3R 10183086 intron CG12814 - chr3R 10183142 intron CG12814 - chr3R 10183199 intron CG12814 - chr3R_6_10180001 chr3R_10180001 RAL-908 1912 chr3R 10231762 10231813 chr3R 10237359 10237408 mdg3 22 5595 5.5 4.0 4.8 3.8 5646 chr3R 10231762 intron CG42795 + chr3R 10234585 intron CG42795 + chr3R 10237408 intron CG42795 + chr3R_22_10230001 chr3R_10230001 RAL-908 1913 chr3R 10255362 10255387 chr3R 10260822 10260847 I-element 13 5460 4.0 4.0 4.0 2.6 5485 chr3R 10255362 3` UTR Sirt6 - chr3R 10258104 intron Sirt6 - chr3R 10260847 exon Sirt6 - chr3R_13_10255001 chr3R_10255001 RAL-908 1914 chr3R 10400275 10400302 chr3R 10400365 10400400 15 97 11.5 3.5 7.5 1.8 125 chr3R 10400275 3` UTR cwo + chr3R 10400338 3` UTR cwo + chr3R 10400400 3` UTR cwo + chr3R_15_10400001 chr3R_10400001 RAL-908 1915 chr3R 10403011 10403057 chr3R 10403112 10403158 9 100 6.5 3.5 5.0 1.5 147 chr3R 10403011 3` UTR CG6325 - chr3R 10403084 3` UTR CG6325 - chr3R 10403158 3` UTR CG6325 - chr3R_9_10400001 chr3R_10400001 RAL-908 1916 chr3R 10417456 10417470 chr3R 10417811 10417817 5 353 12.0 3.5 7.8 0.6 361 chr3R 10417456 intergenic not near genes chr3R 10417636 intergenic not near genes chr3R 10417817 intergenic not near genes chr3R_5_10415001 chr3R_10415001 RAL-908 1917 chr3R 10531865 10531887 chr3R 10531954 10531961 6 94 5.0 0.0 2.5 1.7 96 chr3R 10531865 intron hth - chr3R 10531913 intron hth - chr3R 10531961 intron hth - chr3R_6_10530001 chr3R_10530001 RAL-908 1918 chr3R 10535319 10535343 chr3R 10535432 10535456 7 113 3.5 0.0 1.8 2.5 137 chr3R 10535319 intron hth - chr3R 10535388 intron hth - chr3R 10535456 intron hth - chr3R_7_10535001 chr3R_10535001 RAL-908 1919 chr3R 10627618 10627629 chr3R 10627746 10627757 5 128 5.0 7.0 6.0 0.7 139 chr3R 10627618 intergenic not near genes chr3R 10627688 intergenic not near genes chr3R 10627757 intergenic not near genes chr3R_5_10625001 chr3R_10625001 RAL-908 1920 chr3R 10804153 10804201 chr3R 10811705 10811753 17.6 13 7552 6.5 5.0 5.8 1.9 7600 chr3R 10804153 intergenic CG14692 - chr3R 10807953 intergenic not near genes chr3R 10811753 3` UTR CG14693 - chr3R_13_10805001 chr3R_10805001 RAL-908 1921 chr3R 10817201 10817245 chr3R 10817304 10817348 18 103 6.5 3.5 5.0 3.0 147 chr3R 10817201 3` UTR CG4089 + chr3R 10817274 3` UTR CG4089 + chr3R 10817348 3` UTR CG4089 + chr3R_18_10815001 chr3R_10815001 RAL-908 1922 chr3R 10844786 10844829 chr3R 10844905 10844954 5 122 0.0 5.5 2.8 1.3 168 chr3R 10844786 intron Cad86C + chr3R 10844870 intron Cad86C + chr3R 10844954 intron Cad86C + chr3R_5_10840001 chr3R_10840001 RAL-908 1923 chr3R 10868581 10868621 chr3R 10868669 10868687 4 74 3.0 0.5 1.8 1.4 106 chr3R 10868581 5` UTR SelR - chr3R 10868634 5` UTR SelR - chr3R 10868687 intergenic Tsp86D +,SelR - chr3R_4_10865001 chr3R_10865001 RAL-908 1924 chr3R 10919664 10919716 chr3R 10919762 10919814 14 98 1.5 3.0 2.2 4.4 150 chr3R 10919664 intergenic not near genes chr3R 10919739 intergenic not near genes chr3R 10919814 intergenic not near genes chr3R_14_10915001 chr3R_10915001 RAL-908 1925 chr3R 10920045 10920077 chr3R 10920143 10920175 10 98 3.5 7.0 5.2 1.6 130 chr3R 10920045 intergenic not near genes chr3R 10920110 intergenic not near genes chr3R 10920175 intergenic not near genes chr3R_10_10920001 chr3R_10920001 RAL-908 1926 chr3R 10952734 10952783 chr3R 10952837 10952886 8 103 1.5 1.0 1.2 3.6 152 chr3R 10952734 intergenic not near genes chr3R 10952810 intergenic not near genes chr3R 10952886 intergenic not near genes chr3R_8_10950001 chr3R_10950001 RAL-908 1927 chr3R 10971465 10971505 chr3R 10971576 10971592 8 104 5.5 2.0 3.8 1.7 127 chr3R 10971465 intergenic not near genes chr3R 10971528 intergenic not near genes chr3R 10971592 intergenic not near genes chr3R_8_10970001 chr3R_10970001 RAL-908 1928 chr3R 10987259 10987308 chr3R 10988146 10988195 8 887 2.5 3.0 2.8 2.1 936 chr3R 10987259 intron CG34114 + chr3R 10987727 intron CG34114 + chr3R 10988195 intron CG34114 + chr3R_8_10985001 chr3R_10985001 RAL-908 1929 chr3R 11052073 11052083 chr3R 11052172 11052182 6 99 3.0 1.5 2.2 1.9 109 chr3R 11052073 intergenic not near genes chr3R 11052128 intergenic not near genes chr3R 11052182 intergenic not near genes chr3R_6_11050001 chr3R_11050001 RAL-908 1930 chr3R 11054555 11054604 chr3R 11054672 11054721 13 117 1.5 5.5 3.5 2.9 166 chr3R 11054555 intergenic not near genes chr3R 11054638 intergenic not near genes chr3R 11054721 intergenic not near genes chr3R_13_11050001 chr3R_11050001 RAL-908 1931 chr3R 11056883 11056895 chr3R 11056981 11056993 4 98 6.0 0.0 3.0 1.0 110 chr3R 11056883 intergenic not near genes chr3R 11056938 intergenic not near genes chr3R 11056993 intergenic not near genes chr3R_4_11055001 chr3R_11055001 RAL-908 1932 chr3R 11059004 11059024 chr3R 11059135 11059158 6 128 0.0 4.5 2.2 1.9 154 chr3R 11059004 intergenic not near genes chr3R 11059081 intergenic not near genes chr3R 11059158 intergenic not near genes chr3R_6_11055001 chr3R_11055001 RAL-908 1933 chr3R 11059424 11059467 chr3R 11059520 11059562 17 95 2.5 5.0 3.8 3.5 138 chr3R 11059424 intergenic not near genes chr3R 11059493 intergenic not near genes chr3R 11059562 intergenic not near genes chr3R_17_11055001 chr3R_11055001 RAL-908 1934 chr3R 11065577 11065615 chr3R 11071241 11071276 297 9 5667 2.0 2.5 2.2 2.8 5699 chr3R 11065577 intergenic not near genes chr3R 11068426 intergenic not near genes chr3R 11071276 intergenic not near genes chr3R_9_11065001 chr3R_11065001 RAL-908 1935 chr3R 11085461 11085466 chr3R 11085558 11085563 4 97 3.0 5.5 4.2 0.8 102 chr3R 11085461 3` UTR CR44940 - chr3R 11085512 intergenic CR44940 - chr3R 11085563 intergenic CR44940 - chr3R_4_11085001 chr3R_11085001 RAL-908 1936 chr3R 11085777 11085805 chr3R 11086082 11086094 7 309 3.0 3.0 3.0 1.8 317 chr3R 11085777 intergenic CR44940 - chr3R 11085936 intergenic CR44940 - chr3R 11086094 intergenic not near genes chr3R_7_11085001 chr3R_11085001 RAL-908 1937 chr3R 11151105 11151146 chr3R 11151320 11151360 9 212 5.5 5.5 5.5 1.4 255 chr3R 11151105 3` UTR Ugt86Di - chr3R 11151232 3` UTR Ugt86Di - chr3R 11151360 3` UTR Ugt86Di - chr3R_9_11150001 chr3R_11150001 RAL-908 1938 chr3R 11342550 11342567 chr3R 11342645 11342662 6 96 1.5 5.5 3.5 1.3 112 chr3R 11342550 intron pros + chr3R 11342606 intron pros + chr3R 11342662 intron pros + chr3R_6_11340001 chr3R_11340001 RAL-908 1939 chr3R 11379217 11379268 chr3R 11388392 11388422 roo 10 9170 2.5 5.0 3.8 2.1 9205 chr3R 11379217 intron pros + chr3R 11383820 intron pros + chr3R 11388422 intron pros + chr3R_10_11380001 chr3R_11380001 RAL-908 1940 chr3R 11406268 11406314 chr3R 11406365 11406411 21 96 3.0 3.0 3.0 5.2 143 chr3R 11406268 3` UTR pros + chr3R 11406340 3` UTR pros + chr3R 11406411 3` UTR pros + chr3R_21_11405001 chr3R_11405001 RAL-908 1941 chr3R 11455565 11455611 chr3R 11455711 11455757 12 146 4.5 2.5 3.5 2.7 192 chr3R 11455565 intron,intron CG17230 +,PGRP-LB - chr3R 11455661 intron,intron CG17230 +,PGRP-LB - chr3R 11455757 intron,intron CG17230 +,PGRP-LB - chr3R_12_11455001 chr3R_11455001 RAL-908 1942 chr3R 11461247 11461301 chr3R 11461347 11461392 6 98 1.0 3.0 2.0 2.0 145 chr3R 11461247 intron CG17230 + chr3R 11461320 intron CG17230 + chr3R 11461392 intron CG17230 + chr3R_6_11460001 chr3R_11460001 RAL-908 1943 chr3R 11468903 11468927 chr3R 11469007 11469026 8 101 5.5 3.5 4.5 1.5 123 chr3R 11468903 intergenic not near genes chr3R 11468964 intergenic not near genes chr3R 11469026 intergenic not near genes chr3R_8_11465001 chr3R_11465001 RAL-908 1944 chr3R 11476935 11476968 chr3R 11477057 11477090 12 122 5.0 7.0 6.0 1.7 155 chr3R 11476935 intergenic not near genes chr3R 11477012 intergenic not near genes chr3R 11477090 intergenic not near genes chr3R_12_11475001 chr3R_11475001 RAL-908 1945 chr3R 11513837 11513856 chr3R 11513935 11513959 5 102 3.0 3.0 3.0 1.2 122 chr3R 11513837 intergenic not near genes chr3R 11513898 intergenic not near genes chr3R 11513959 intergenic not near genes chr3R_5_11510001 chr3R_11510001 RAL-908 1946 chr3R 11518797 11518832 chr3R 11518908 11518943 11 110 6.0 3.0 4.5 2.0 146 chr3R 11518797 intergenic not near genes chr3R 11518870 intergenic not near genes chr3R 11518943 intergenic not near genes chr3R_11_11515001 chr3R_11515001 RAL-908 1947 chr3R 11642155 11642191 chr3R 11642257 11642273 12 100 3.0 3.5 3.2 2.9 118 chr3R 11642155 intron Csk - chr3R 11642214 intron Csk - chr3R 11642273 intron Csk - chr3R_12_11640001 chr3R_11640001 RAL-908 1948 chr3R 11664774 11664820 chr3R 11664886 11664915 12 108 1.0 4.0 2.5 3.4 141 chr3R 11664774 intron CG42327 + chr3R 11664844 intron CG42327 + chr3R 11664915 intron CG42327 + chr3R_12_11660001 chr3R_11660001 RAL-908 1949 chr3R 11694705 11694735 chr3R 11694818 11694848 8 113 7.5 3.0 5.2 1.3 143 chr3R 11694705 intergenic Fer3 - chr3R 11694776 intergenic Fer3 - chr3R 11694848 intergenic not near genes chr3R_8_11690001 chr3R_11690001 RAL-908 1950 chr3R 11708615 11708663 chr3R 11708843 11708891 19 228 3.0 1.5 2.2 5.9 276 chr3R 11708615 intergenic not near genes chr3R 11708753 intergenic not near genes chr3R 11708891 intergenic not near genes chr3R_19_11705001 chr3R_11705001 RAL-908 1951 chr3R 11713473 11713526 chr3R 11713573 11713626 13 99 5.0 2.0 3.5 2.9 153 chr3R 11713473 intergenic not near genes chr3R 11713550 intergenic not near genes chr3R 11713626 intergenic not near genes chr3R_13_11710001 chr3R_11710001 RAL-908 1952 chr3R 11728153 11728204 chr3R 11728258 11728305 9 98 0.0 2.0 1.0 4.5 152 chr3R 11728153 intron CG12594 + chr3R 11728229 intron CG12594 + chr3R 11728305 intron CG12594 + chr3R_9_11725001 chr3R_11725001 RAL-908 1953 chr3R 11811068 11811122 chr3R 11811184 11811238 10 113 0.5 3.5 2.0 3.3 170 chr3R 11811068 5` UTR ClC-a - chr3R 11811153 intron ClC-a - chr3R 11811238 intron ClC-a - chr3R_10_11810001 chr3R_11810001 RAL-908 1954 chr3R 11830331 11830360 chr3R 11830435 11830464 10 104 3.5 3.5 3.5 2.2 133 chr3R 11830331 intron CG6959 - chr3R 11830398 intron CG6959 - chr3R 11830464 intron CG6959 - chr3R_10_11830001 chr3R_11830001 RAL-908 1955 chr3R 11841040 11841087 chr3R 11846251 11846290 BS 7 5206 3.5 3.0 3.2 1.7 5250 chr3R 11841040 intron CG6959 - chr3R 11843665 intron CG6959 - chr3R 11846290 intron CG6959 - chr3R_7_11840001 chr3R_11840001 RAL-908 1956 chr3R 11957833 11957868 chr3R 11958136 11958170 S-element 15 302 5.5 0.5 3.0 3.8 337 chr3R 11957833 intergenic not near genes chr3R 11958002 intergenic not near genes chr3R 11958170 intergenic not near genes chr3R_15_11955001 chr3R_11955001 RAL-908 1957 chr3R 12022865 12022916 chr3R 12025062 12025113 pogo 17 2197 1.5 2.0 1.8 6.1 2248 chr3R 12022865 intergenic not near genes chr3R 12023989 intergenic not near genes chr3R 12025113 intergenic not near genes chr3R_17_12020001 chr3R_12020001 RAL-908 1958 chr3R 12080846 12080896 chr3R 12080943 12080995 8 96 2.0 3.5 2.8 2.1 149 chr3R 12080846 intron CG14741 - chr3R 12080920 intron CG14741 - chr3R 12080995 intron CG14741 - chr3R_8_12080001 chr3R_12080001 RAL-908 1959 chr3R 12097222 12097270 chr3R 12097346 12097394 13 123 5.5 1.5 3.5 2.9 172 chr3R 12097222 intron dpr17 + chr3R 12097308 intron dpr17 + chr3R 12097394 intron dpr17 + chr3R_13_12095001 chr3R_12095001 RAL-908 1960 chr3R 12133910 12133951 chr3R 12134059 12134100 12 149 3.5 3.5 3.5 2.7 190 chr3R 12133910 intergenic not near genes chr3R 12134005 intergenic not near genes chr3R 12134100 intergenic not near genes chr3R_12_12130001 chr3R_12130001 RAL-908 1961 chr3R 12159870 12159910 chr3R 12159977 12160002 15 104 3.0 3.0 3.0 3.8 132 chr3R 12159870 intergenic not near genes chr3R 12159936 intergenic not near genes chr3R 12160002 intergenic not near genes chr3R_15_12155001 chr3R_12155001 RAL-908 1962 chr3R 12165869 12165888 chr3R 12166014 12166033 13 145 5.0 4.5 4.8 2.2 164 chr3R 12165869 intron Cpn - chr3R 12165951 intron Cpn - chr3R 12166033 intron Cpn - chr3R_13_12165001 chr3R_12165001 RAL-908 1963 chr3R 12165890 12165902 chr3R 12166009 12166046 8 139 4.0 4.0 4.0 1.6 156 chr3R 12165890 intron Cpn - chr3R 12165968 intron Cpn - chr3R 12166046 intron Cpn - chr3R_8_12165001 chr3R_12165001 RAL-908 1964 chr3R 12267838 12267882 chr3R 12267938 12267982 19 99 3.0 4.5 3.8 4.0 144 chr3R 12267838 intron svp + chr3R 12267910 intron svp + chr3R 12267982 intron svp + chr3R_19_12265001 chr3R_12265001 RAL-908 1965 chr3R 12314204 12314257 chr3R 12314338 12314391 11 133 3.0 2.0 2.5 3.1 187 chr3R 12314204 intergenic not near genes chr3R 12314298 intergenic not near genes chr3R 12314391 intergenic not near genes chr3R_11_12310001 chr3R_12310001 RAL-908 1966 chr3R 12333891 12333914 chr3R 12333986 12334016 6 101 4.0 6.0 5.0 1.0 125 chr3R 12333891 intergenic not near genes chr3R 12333954 intergenic not near genes chr3R 12334016 intergenic not near genes chr3R_6_12330001 chr3R_12330001 RAL-908 1967 chr3R 12344111 12344158 chr3R 12344208 12344255 17 96 3.0 2.0 2.5 4.9 144 chr3R 12344111 intergenic not near genes chr3R 12344183 intergenic not near genes chr3R 12344255 intergenic not near genes chr3R_17_12340001 chr3R_12340001 RAL-908 1968 chr3R 12397229 12397233 chr3R 12397329 12397329 4 100 2.0 8.5 5.2 0.6 100 chr3R 12397229 intron CG34402 + chr3R 12397279 intron CG34402 + chr3R 12397329 intron CG34402 + chr3R_4_12395001 chr3R_12395001 RAL-908 1969 chr3R 12397238 12397242 chr3R 12397328 12397343 4 96 2.0 8.5 5.2 0.6 105 chr3R 12397238 intron CG34402 + chr3R 12397290 intron CG34402 + chr3R 12397343 intron CG34402 + chr3R_4_12395001 chr3R_12395001 RAL-908 1970 chr3R 12538160 12538213 chr3R 12538259 12538311 18 98 3.5 2.5 3.0 4.5 151 chr3R 12538160 intron Octbeta3R - chr3R 12538236 intron Octbeta3R - chr3R 12538311 intron Octbeta3R - chr3R_18_12535001 chr3R_12535001 RAL-908 1971 chr3R 12675431 12675477 chr3R 12675543 12675588 15 111 2.0 5.0 3.5 3.3 157 chr3R 12675431 exon CG6188 + chr3R 12675510 intron CG6188 + chr3R 12675588 intron CG6188 + chr3R_15_12675001 chr3R_12675001 RAL-908 1972 chr3R 12733469 12733509 chr3R 12733566 12733606 5 97 4.0 3.0 3.5 1.1 137 chr3R 12733469 intergenic not near genes chr3R 12733538 intergenic not near genes chr3R 12733606 intergenic not near genes chr3R_5_12730001 chr3R_12730001 RAL-908 1973 chr3R 12763114 12763152 chr3R 12763211 12763249 11 97 0.5 7.0 3.8 2.3 135 chr3R 12763114 intron beat-Vc - chr3R 12763182 intron beat-Vc - chr3R 12763249 intron beat-Vc - chr3R_11_12760001 chr3R_12760001 RAL-908 1974 chr3R 12766061 12766109 chr3R 12766205 12766253 9 142 4.5 2.5 3.5 2.0 192 chr3R 12766061 intron beat-Vc - chr3R 12766157 intron beat-Vc - chr3R 12766253 intron beat-Vc - chr3R_9_12765001 chr3R_12765001 RAL-908 1975 chr3R 12780275 12780302 chr3R 12780408 12780435 BS 5 133 5.5 3.5 4.5 0.9 160 chr3R 12780275 intron beat-Vc - chr3R 12780355 intron beat-Vc - chr3R 12780435 intron beat-Vc - chr3R_5_12780001 chr3R_12780001 RAL-908 1976 chr3R 12786433 12786484 chr3R 12786813 12786862 5 378 3.0 5.0 4.0 1.0 429 chr3R 12786433 intergenic not near genes chr3R 12786648 intergenic not near genes chr3R 12786862 intergenic not near genes chr3R_5_12785001 chr3R_12785001 RAL-908 1977 chr3R 12816512 12816552 chr3R 12816607 12816648 8 95 4.5 3.0 3.8 1.7 136 chr3R 12816512 intron CG31345 - chr3R 12816580 intron CG31345 - chr3R 12816648 intron CG31345 - chr3R_8_12815001 chr3R_12815001 RAL-908 1978 chr3R 12828010 12828062 chr3R 12828475 12828527 15 463 4.5 4.5 4.5 2.7 517 chr3R 12828010 intergenic not near genes chr3R 12828268 intergenic not near genes chr3R 12828527 intergenic not near genes chr3R_15_12825001 chr3R_12825001 RAL-908 1979 chr3R 12850277 12850318 chr3R 12850409 12850455 10 134 3.0 1.0 2.0 3.3 178 chr3R 12850277 intergenic CR44234 - chr3R 12850366 intergenic CR44234 - chr3R 12850455 3` UTR CR44234 - chr3R_10_12850001 chr3R_12850001 RAL-908 1980 chr3R 12858722 12858755 chr3R 12858823 12858855 9 100 4.0 2.5 3.2 2.1 133 chr3R 12858722 intron CG10126 - chr3R 12858788 intron CG10126 - chr3R 12858855 intron CG10126 - chr3R_9_12855001 chr3R_12855001 RAL-908 1981 chr3R 12864551 12864584 chr3R 12865056 12865089 roo 8 505 4.0 6.5 5.2 1.3 538 chr3R 12864551 intergenic not near genes chr3R 12864820 intergenic not near genes chr3R 12865089 intergenic not near genes chr3R_8_12860001 chr3R_12860001 RAL-908 1982 chr3R 12901659 12901704 chr3R 12901834 12901879 10 174 2.5 3.0 2.8 2.6 220 chr3R 12901659 intergenic not near genes chr3R 12901769 intergenic not near genes chr3R 12901879 intergenic not near genes chr3R_10_12900001 chr3R_12900001 RAL-908 1983 chr3R 12908449 12908469 chr3R 12908545 12908570 5 98 3.0 5.5 4.2 1.0 121 chr3R 12908449 intergenic not near genes chr3R 12908510 intergenic not near genes chr3R 12908570 intergenic not near genes chr3R_5_12905001 chr3R_12905001 RAL-908 1984 chr3R 12920140 12920173 chr3R 12925356 12925396 copia 7 5218 3.0 3.0 3.0 1.8 5256 chr3R 12920140 intron beat-Vb + chr3R 12922768 intron beat-Vb + chr3R 12925396 intron beat-Vb + chr3R_7_12920001 chr3R_12920001 RAL-908 1985 chr3R 12935336 12935344 chr3R 12935460 12935468 5 124 4.0 0.0 2.0 1.7 132 chr3R 12935336 intergenic not near genes chr3R 12935402 intergenic not near genes chr3R 12935468 intergenic not near genes chr3R_5_12935001 chr3R_12935001 RAL-908 1986 chr3R 12965857 12965904 chr3R 12965979 12966026 20 120 4.0 4.5 4.2 3.8 169 chr3R 12965857 intron,3` UTR grsm -,Cyp304a1 + chr3R 12965942 intron,3` UTR grsm -,CG14384 - chr3R 12966026 intron,3` UTR grsm -,CG14384 - chr3R_20_12965001 chr3R_12965001 RAL-908 1987 chr3R 13059945 13059974 chr3R 13060160 13060189 12 215 1.5 1.0 1.2 5.5 244 chr3R 13059945 intron sim + chr3R 13060067 intron sim + chr3R 13060189 intron sim + chr3R_12_13060001 chr3R_13060001 RAL-908 1988 chr3R 13064763 13064794 chr3R 13064882 13064911 13 119 1.5 0.0 0.8 7.2 148 chr3R 13064763 intron sim + chr3R 13064837 intron sim + chr3R 13064911 intron sim + chr3R_13_13060001 chr3R_13060001 RAL-908 1989 chr3R 13066984 13067008 chr3R 13067091 13067115 10 107 3.5 4.5 4.0 2.0 131 chr3R 13066984 intron sim + chr3R 13067050 intron sim + chr3R 13067115 intron sim + chr3R_10_13065001 chr3R_13065001 RAL-908 1990 chr3R 13067829 13067871 chr3R 13067929 13067971 10 96 2.0 6.0 4.0 2.0 142 chr3R 13067829 intron sim + chr3R 13067900 intron sim + chr3R 13067971 intron sim + chr3R_10_13065001 chr3R_13065001 RAL-908 1991 chr3R 13075348 13075388 chr3R 13075449 13075489 8 99 1.5 1.0 1.2 3.6 141 chr3R 13075348 intron sim + chr3R 13075418 intron sim + chr3R 13075489 intron sim + chr3R_8_13075001 chr3R_13075001 RAL-908 1992 chr3R 13104419 13104420 chr3R 21907534 21907534 5 8803115 8.0 19.0 13.5 0.3 8803115 chr3R 13104419 intron timeout + chr3R 17505976 intergenic Dscam3 - chr3R 21907534 intergenic CG6678 + chr3R_5_17505001 chr3R_17505001 RAL-908 1993 chr3R 13138302 13138335 chr3R 13138410 13138443 7 104 0.0 1.5 0.8 3.9 141 chr3R 13138302 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138372 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138443 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_7_13135001 chr3R_13135001 RAL-908 1994 chr3R 13143032 13143065 chr3R 13148623 13148661 mdg3 9 5592 1.0 5.5 3.2 2.1 5629 chr3R 13143032 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145846 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148661 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_9_13145001 chr3R_13145001 RAL-908 1995 chr3R 13205388 13205442 chr3R 13205489 13205543 7 101 1.5 2.5 2.0 2.3 155 chr3R 13205388 intergenic not near genes chr3R 13205466 intergenic not near genes chr3R 13205543 intergenic not near genes chr3R_7_13205001 chr3R_13205001 RAL-908 1996 chr3R 13206633 13206655 chr3R 13206890 13206912 6 256 7.5 1.5 4.5 1.1 279 chr3R 13206633 intergenic not near genes chr3R 13206772 intergenic not near genes chr3R 13206912 intergenic not near genes chr3R_6_13205001 chr3R_13205001 RAL-908 1997 chr3R 13274194 13274245 chr3R 13274290 13274304 26 96 2.5 3.0 2.8 6.8 110 chr3R 13274194 intergenic not near genes chr3R 13274249 intergenic not near genes chr3R 13274304 intergenic not near genes chr3R_26_13270001 chr3R_13270001 RAL-908 1998 chr3R 13276970 13277023 chr3R 13277079 13277120 8 104 2.0 2.0 2.0 2.7 150 chr3R 13276970 intergenic not near genes chr3R 13277045 intergenic not near genes chr3R 13277120 intergenic not near genes chr3R_8_13275001 chr3R_13275001 RAL-908 1999 chr3R 13314085 13314121 chr3R 13318881 13318929 Doc 8 4806 7.5 2.0 4.8 1.4 4844 chr3R 13314085 intergenic not near genes chr3R 13316507 intergenic not near genes chr3R 13318929 intergenic CG45080 - chr3R_8_13315001 chr3R_13315001 RAL-908 2000 chr3R 13348987 13349032 chr3R 13349082 13349128 20 94 5.0 5.5 5.2 3.2 141 chr3R 13348987 intergenic not near genes chr3R 13349058 intergenic not near genes chr3R 13349128 intergenic not near genes chr3R_20_13345001 chr3R_13345001 RAL-908 2001 chr3R 13376252 13376300 chr3R 13376361 13376409 7 107 4.5 3.0 3.8 1.5 157 chr3R 13376252 intron CG9813 - chr3R 13376330 intron CG9813 - chr3R 13376409 intron CG9813 - chr3R_7_13375001 chr3R_13375001 RAL-908 2002 chr3R 13380712 13380746 chr3R 13380819 13380854 7 107 2.5 3.5 3.0 1.8 142 chr3R 13380712 exon CG8870 + chr3R 13380783 exon CG8870 + chr3R 13380854 intron CG8870 + chr3R_7_13380001 chr3R_13380001 RAL-908 2003 chr3R 13418648 13418680 chr3R 13418744 13418776 11 96 4.5 3.0 3.8 2.3 128 chr3R 13418648 intergenic not near genes chr3R 13418712 intergenic not near genes chr3R 13418776 intergenic not near genes chr3R_11_13415001 chr3R_13415001 RAL-908 2004 chr3R 13496612 13496662 chr3R 13496710 13496761 12 99 4.0 1.0 2.5 3.4 149 chr3R 13496612 intergenic not near genes chr3R 13496686 intergenic not near genes chr3R 13496761 intergenic not near genes chr3R_12_13495001 chr3R_13495001 RAL-908 2005 chr3R 13505837 13505868 chr3R 13505933 13505964 8 93 5.0 1.0 3.0 2.0 127 chr3R 13505837 intergenic not near genes chr3R 13505900 intergenic not near genes chr3R 13505964 intergenic not near genes chr3R_8_13505001 chr3R_13505001 RAL-908 2006 chr3R 13517208 13517252 chr3R 13520045 13520089 jockey 6 2837 3.5 0.0 1.8 2.1 2881 chr3R 13517208 intergenic not near genes chr3R 13518648 intergenic not near genes chr3R 13520089 intergenic not near genes chr3R_6_13515001 chr3R_13515001 RAL-908 2007 chr3R 13599040 13599091 chr3R 13599140 13599191 20 100 2.5 5.0 3.8 4.2 151 chr3R 13599040 intergenic not near genes chr3R 13599116 intergenic not near genes chr3R 13599191 intergenic not near genes chr3R_20_13595001 chr3R_13595001 RAL-908 2008 chr3R 13603044 13603073 chr3R 13603155 13603163 5 106 3.5 3.5 3.5 1.1 119 chr3R 13603044 intergenic not near genes chr3R 13603104 intergenic not near genes chr3R 13603163 intergenic not near genes chr3R_5_13600001 chr3R_13600001 RAL-908 2009 chr3R 13672927 13672967 chr3R 13673025 13673065 14 98 6.5 3.5 5.0 2.3 138 chr3R 13672927 intron Task6 - chr3R 13672996 intron Task6 - chr3R 13673065 intron Task6 - chr3R_14_13670001 chr3R_13670001 RAL-908 2010 chr3R 13693027 13693028 chr3R 21907534 21907536 7 8214507 18.5 19.0 18.8 0.4 8214509 chr3R 13693027 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_7_17800001 chr3R_17800001 RAL-908 2011 chr3R 13758130 13758168 chr3R 13758236 13758264 5 104 0.0 3.0 1.5 2.0 134 chr3R 13758130 intron CG34383 + chr3R 13758197 intron CG34383 + chr3R 13758264 intron CG34383 + chr3R_5_13755001 chr3R_13755001 RAL-908 2012 chr3R 13863663 13863702 chr3R 13863771 13863809 5 108 2.0 4.5 3.2 1.2 146 chr3R 13863663 intergenic not near genes chr3R 13863736 intergenic not near genes chr3R 13863809 intergenic not near genes chr3R_5_13860001 chr3R_13860001 RAL-908 2013 chr3R 13941407 13941448 chr3R 13941502 13941547 10 99 2.5 2.0 2.2 3.1 140 chr3R 13941407 intergenic not near genes chr3R 13941477 intergenic not near genes chr3R 13941547 intergenic not near genes chr3R_10_13940001 chr3R_13940001 RAL-908 2014 chr3R 13954275 13954315 chr3R 13954393 13954433 6 118 3.0 0.0 1.5 2.4 158 chr3R 13954275 intergenic not near genes chr3R 13954354 intergenic not near genes chr3R 13954433 intergenic not near genes chr3R_6_13950001 chr3R_13950001 RAL-908 2015 chr3R 13994283 13994334 chr3R 13994558 13994609 15 275 0.5 6.0 3.2 3.6 326 chr3R 13994283 intron rdx - chr3R 13994446 intron rdx - chr3R 13994609 intron rdx - chr3R_15_13990001 chr3R_13990001 RAL-908 2016 chr3R 14021622 14021662 chr3R 14023467 14023507 S-element 11 1845 6.5 5.5 6.0 1.6 1885 chr3R 14021622 intron rdx - chr3R 14022564 intron rdx - chr3R 14023507 intron rdx - chr3R_11_14020001 chr3R_14020001 RAL-908 2017 chr3R 14047756 14047804 chr3R 14047867 14047914 10 108 0.0 3.0 1.5 4.0 158 chr3R 14047756 intergenic not near genes chr3R 14047835 intergenic not near genes chr3R 14047914 intergenic not near genes chr3R_10_14045001 chr3R_14045001 RAL-908 2018 chr3R 14049001 14049047 chr3R 14049096 14049140 19 98 3.0 2.5 2.8 5.0 139 chr3R 14049001 intergenic not near genes chr3R 14049070 intergenic not near genes chr3R 14049140 intergenic not near genes chr3R_19_14045001 chr3R_14045001 RAL-908 2019 chr3R 14058115 14058147 chr3R 14058245 14058287 9 139 3.5 2.5 3.0 2.2 172 chr3R 14058115 intron foxo + chr3R 14058201 intron foxo + chr3R 14058287 intron foxo + chr3R_9_14055001 chr3R_14055001 RAL-908 2020 chr3R 14067122 14067154 chr3R 14067221 14067253 6 99 4.0 1.0 2.5 1.7 131 chr3R 14067122 exon foxo + chr3R 14067188 intron foxo + chr3R 14067253 intron foxo + chr3R_6_14065001 chr3R_14065001 RAL-908 2021 chr3R 14079808 14079833 chr3R 14079910 14079935 7 100 5.0 4.0 4.5 1.3 127 chr3R 14079808 intron foxo + chr3R 14079872 intron foxo + chr3R 14079935 intron foxo + chr3R_7_14075001 chr3R_14075001 RAL-908 2022 chr3R 14132415 14132450 chr3R 14132548 14132575 11 132 0.0 6.0 3.0 2.8 160 chr3R 14132415 intergenic CG14356 - chr3R 14132495 intergenic CG14356 - chr3R 14132575 intergenic not near genes chr3R_11_14130001 chr3R_14130001 RAL-908 2023 chr3R 14166685 14166699 chr3R 14167320 14167364 5 659 1.5 2.0 1.8 1.8 679 chr3R 14166685 3` UTR Dop1R1 - chr3R 14167024 3` UTR Dop1R1 - chr3R 14167364 3` UTR Dop1R1 - chr3R_5_14165001 chr3R_14165001 RAL-908 2024 chr3R 14180790 14180817 chr3R 14185575 14185586 F-element 10 4783 7.0 0.0 3.5 2.2 4796 chr3R 14180790 intron Dop1R1 - chr3R 14183188 intron Dop1R1 - chr3R 14185586 intron Dop1R1 - chr3R_10_14180001 chr3R_14180001 RAL-908 2025 chr3R 14193601 14193625 chr3R 14193909 14193925 4 305 0.5 0.5 0.5 2.7 324 chr3R 14193601 intron Dop1R1 - chr3R 14193763 intron Dop1R1 - chr3R 14193925 intron Dop1R1 - chr3R_4_14190001 chr3R_14190001 RAL-908 2026 chr3R 14207125 14207160 chr3R 14208456 14208478 8 1327 2.0 5.5 3.8 1.7 1353 chr3R 14207125 intron Dop1R1 - chr3R 14207802 intron Dop1R1 - chr3R 14208478 intron Dop1R1 - chr3R_8_14205001 chr3R_14205001 RAL-908 2027 chr3R 14235680 14235717 chr3R 14235783 14235815 14 102 4.0 4.0 4.0 2.8 135 chr3R 14235680 intergenic not near genes chr3R 14235748 intergenic not near genes chr3R 14235815 intergenic not near genes chr3R_14_14235001 chr3R_14235001 RAL-908 2028 chr3R 14246386 14246399 chr3R 14247902 14247915 jockey 4 1516 2.0 5.5 3.8 0.8 1529 chr3R 14246386 intergenic not near genes chr3R 14247150 intergenic not near genes chr3R 14247915 intergenic not near genes chr3R_4_14245001 chr3R_14245001 RAL-908 2029 chr3R 14246401 14246412 chr3R 14247892 14247928 jockey 4 1505 1.0 4.0 2.5 1.1 1527 chr3R 14246401 intergenic not near genes chr3R 14247164 intergenic not near genes chr3R 14247928 intergenic not near genes chr3R_4_14245001 chr3R_14245001 RAL-908 2030 chr3R 14532243 14532265 chr3R 14532551 14532598 9 324 3.5 2.0 2.8 2.4 355 chr3R 14532243 intron Pde6 - chr3R 14532420 intron Pde6 - chr3R 14532598 intron Pde6 - chr3R_9_14530001 chr3R_14530001 RAL-908 2031 chr3R 14608450 14608470 chr3R 14608562 14608582 7 111 2.0 5.5 3.8 1.5 132 chr3R 14608450 intergenic stumps + chr3R 14608516 intergenic stumps + chr3R 14608582 intergenic not near genes chr3R_7_14605001 chr3R_14605001 RAL-908 2032 chr3R 14704364 14704418 chr3R 14704461 14704510 13 95 5.0 3.5 4.2 2.5 146 chr3R 14704364 intron kibra - chr3R 14704437 intron kibra - chr3R 14704510 intron kibra - chr3R_13_14700001 chr3R_14700001 RAL-908 2033 chr3R 14764564 14764586 chr3R 14764684 14764706 10 120 4.5 4.0 4.2 1.9 142 chr3R 14764564 intron jvl + chr3R 14764635 intron jvl + chr3R 14764706 intron jvl + chr3R_10_14760001 chr3R_14760001 RAL-908 2034 chr3R 14775979 14776033 chr3R 14776090 14776124 13 108 6.5 4.0 5.2 2.1 145 chr3R 14775979 intron jvl + chr3R 14776052 intron jvl + chr3R 14776124 intron jvl + chr3R_13_14775001 chr3R_14775001 RAL-908 2035 chr3R 14779056 14779094 chr3R 14779156 14779194 9 98 5.0 3.0 4.0 1.8 138 chr3R 14779056 intron jvl + chr3R 14779125 intron jvl + chr3R 14779194 intron jvl + chr3R_9_14775001 chr3R_14775001 RAL-908 2036 chr3R 14795265 14795308 chr3R 14795365 14795408 17 99 4.5 6.5 5.5 2.6 143 chr3R 14795265 3` UTR jvl + chr3R 14795336 3` UTR jvl + chr3R 14795408 3` UTR jvl + chr3R_17_14795001 chr3R_14795001 RAL-908 2037 chr3R 14821598 14821647 chr3R 14821767 14821816 16 168 6.0 6.5 6.2 2.2 218 chr3R 14821598 intron btsz - chr3R 14821707 intron btsz - chr3R 14821816 intron btsz - chr3R_16_14820001 chr3R_14820001 RAL-908 2038 chr3R 14839797 14839846 chr3R 14840681 14840718 7 879 1.0 3.0 2.0 2.3 921 chr3R 14839797 intron btsz - chr3R 14840258 intron btsz - chr3R 14840718 intron btsz - chr3R_7_14840001 chr3R_14840001 RAL-908 2039 chr3R 14851601 14851653 chr3R 14851721 14851772 15 120 4.0 7.5 5.8 2.2 171 chr3R 14851601 intron btsz - chr3R 14851686 intron btsz - chr3R 14851772 intron btsz - chr3R_15_14850001 chr3R_14850001 RAL-908 2040 chr3R 14923694 14923747 chr3R 14923790 14923844 7 96 4.0 3.5 3.8 1.5 150 chr3R 14923694 3` UTR CR45598 - chr3R 14923769 intergenic CR45598 - chr3R 14923844 intergenic CR45598 - chr3R_7_14920001 chr3R_14920001 RAL-908 2041 chr3R 14944881 14944886 chr3R 14944982 14944987 4 101 6.5 3.5 5.0 0.7 106 chr3R 14944881 intergenic not near genes chr3R 14944934 intergenic not near genes chr3R 14944987 intergenic not near genes chr3R_4_14940001 chr3R_14940001 RAL-908 2042 chr3R 14953969 14954017 chr3R 14954094 14954142 13 125 4.0 5.5 4.8 2.2 173 chr3R 14953969 intergenic not near genes chr3R 14954056 intergenic not near genes chr3R 14954142 intergenic not near genes chr3R_13_14950001 chr3R_14950001 RAL-908 2043 chr3R 15020013 15020059 chr3R 15020113 15020144 7 98 4.5 2.0 3.2 1.7 131 chr3R 15020013 intergenic not near genes chr3R 15020078 intergenic not near genes chr3R 15020144 intergenic not near genes chr3R_7_15020001 chr3R_15020001 RAL-908 2044 chr3R 15026320 15026345 chr3R 15026426 15026451 5 104 3.5 7.5 5.5 0.8 131 chr3R 15026320 intergenic not near genes chr3R 15026386 intergenic not near genes chr3R 15026451 intergenic not near genes chr3R_5_15025001 chr3R_15025001 RAL-908 2045 chr3R 15041405 15041455 chr3R 15045193 15045243 Doc 18 3788 4.0 5.5 4.8 3.1 3838 chr3R 15041405 intergenic not near genes chr3R 15043324 intergenic not near genes chr3R 15045243 intergenic not near genes chr3R_18_15040001 chr3R_15040001 RAL-908 2046 chr3R 15052420 15052458 chr3R 15052769 15052807 14 345 3.5 3.0 3.2 3.3 387 chr3R 15052420 intergenic not near genes chr3R 15052614 intergenic not near genes chr3R 15052807 intergenic not near genes chr3R_14_15050001 chr3R_15050001 RAL-908 2047 chr3R 15061018 15061030 chr3R 15061119 15061131 9 101 3.0 2.5 2.8 2.4 113 chr3R 15061018 intron dpr9 - chr3R 15061074 intron dpr9 - chr3R 15061131 intron dpr9 - chr3R_9_15060001 chr3R_15060001 RAL-908 2048 chr3R 15079787 15079837 chr3R 15080048 15080098 pogo 14 260 7.0 1.5 4.2 2.7 311 chr3R 15079787 3` UTR CG6966 - chr3R 15079942 3` UTR CG6966 - chr3R 15080098 3` UTR CG6966 - chr3R_14_15075001 chr3R_15075001 RAL-908 2049 chr3R 15102493 15102529 chr3R 15109771 15109803 412 11 7277 2.0 4.0 3.0 2.8 7310 chr3R 15102493 intron CG42788 - chr3R 15106148 intron CG42788 - chr3R 15109803 intron CG42788 - chr3R_11_15105001 chr3R_15105001 RAL-908 2050 chr3R 15132046 15132064 chr3R 15135124 15135144 Juan 12 3080 5.5 2.5 4.0 2.4 3098 chr3R 15132046 intergenic CG42788 - chr3R 15133595 intergenic not near genes chr3R 15135144 3` UTR CG6912 - chr3R_12_15130001 chr3R_15130001 RAL-908 2051 chr3R 15156582 15156624 chr3R 15156683 15156725 8 101 4.0 0.0 2.0 2.7 143 chr3R 15156582 intron Gyc88E + chr3R 15156654 intron Gyc88E + chr3R 15156725 intron Gyc88E + chr3R_8_15155001 chr3R_15155001 RAL-908 2052 chr3R 15162526 15162553 chr3R 15167314 15167341 F-element 5 4787 7.5 2.0 4.8 0.9 4815 chr3R 15162526 intron Gyc88E + chr3R 15164934 intron Gyc88E + chr3R 15167341 intron Gyc88E + chr3R_5_15160001 chr3R_15160001 RAL-908 2053 chr3R 15302215 15302223 chr3R 15302321 15302329 4 106 10.0 5.5 7.8 0.5 114 chr3R 15302215 intron Tm1 + chr3R 15302272 intron Tm1 + chr3R 15302329 intron Tm1 + chr3R_4_15300001 chr3R_15300001 RAL-908 2054 chr3R 15416235 15416280 chr3R 15416335 15416365 8 98 4.5 6.0 5.2 1.3 130 chr3R 15416235 3` UTR Atx2 + chr3R 15416300 3` UTR Atx2 + chr3R 15416365 3` UTR Atx2 + chr3R_8_15415001 chr3R_15415001 RAL-908 2055 chr3R 15504155 15504203 chr3R 15504265 15504313 19 110 2.5 2.0 2.2 5.9 158 chr3R 15504155 intergenic not near genes chr3R 15504234 intergenic not near genes chr3R 15504313 intergenic not near genes chr3R_19_15500001 chr3R_15500001 RAL-908 2056 chr3R 15594657 15594676 chr3R 15594760 15594779 6 103 0.0 5.0 2.5 1.7 122 chr3R 15594657 intergenic not near genes chr3R 15594718 intergenic not near genes chr3R 15594779 intergenic not near genes chr3R_6_15590001 chr3R_15590001 RAL-908 2057 chr3R 15601145 15601195 chr3R 15608686 15608737 412 16 7541 5.0 7.0 6.0 2.3 7592 chr3R 15601145 intergenic not near genes chr3R 15604941 intergenic not near genes chr3R 15608737 intergenic not near genes chr3R_16_15600001 chr3R_15600001 RAL-908 2058 chr3R 15618732 15618764 chr3R 15626225 15626258 blood 10 7494 2.5 4.5 3.5 2.2 7526 chr3R 15618732 intergenic not near genes chr3R 15622495 intergenic not near genes chr3R 15626258 intergenic not near genes chr3R_10_15620001 chr3R_15620001 RAL-908 2059 chr3R 15691177 15691331 chr3R 15691287 15691438 13 113 0.0 0.0 0.0 13.0 261 chr3R 15691177 intergenic not near genes chr3R 15691308 intergenic not near genes chr3R 15691438 intergenic not near genes chr3R_13_15690001 chr3R_15690001 RAL-908 2060 chr3R 15692630 15692678 chr3R 15692743 15692791 20 111 3.5 2.5 3.0 5.0 161 chr3R 15692630 intergenic CG31446 + chr3R 15692710 intergenic CG31446 + chr3R 15692791 intergenic CG31446 + chr3R_20_15690001 chr3R_15690001 RAL-908 2061 chr3R 15702872 15702889 chr3R 15703082 15703099 5 210 0.0 8.0 4.0 1.0 227 chr3R 15702872 intergenic not near genes chr3R 15702986 intergenic not near genes chr3R 15703099 intergenic not near genes chr3R_5_15700001 chr3R_15700001 RAL-908 2062 chr3R 15734176 15734194 chr3R 15734287 15734305 4 111 2.5 3.0 2.8 1.1 129 chr3R 15734176 intergenic not near genes chr3R 15734240 intergenic not near genes chr3R 15734305 intergenic not near genes chr3R_4_15730001 chr3R_15730001 RAL-908 2063 chr3R 15790120 15790269 chr3R 15790248 15790387 21 129 20.0 18.5 19.2 1.0 267 chr3R 15790120 exon c(3)G - chr3R 15790254 exon c(3)G - chr3R 15790387 exon c(3)G - chr3R_21_15790001 chr3R_15790001 RAL-908 2064 chr3R 15790283 15790400 chr3R 15790574 15790626 15 243 21.5 31.5 26.5 0.5 343 chr3R 15790283 exon c(3)G - chr3R 15790454 exon c(3)G - chr3R 15790626 exon c(3)G - chr3R_15_15790001 chr3R_15790001 RAL-908 2065 chr3R 15790820 15790859 chr3R 15790956 15790995 15 136 23.0 22.0 22.5 0.6 175 chr3R 15790820 exon c(3)G - chr3R 15790908 intron c(3)G - chr3R 15790995 exon c(3)G - chr3R_15_15790001 chr3R_15790001 RAL-908 2066 chr3R 15878081 15878100 chr3R 15878189 15878208 7 108 2.5 6.0 4.2 1.3 127 chr3R 15878081 intergenic not near genes chr3R 15878144 intergenic not near genes chr3R 15878208 intergenic not near genes chr3R_7_15875001 chr3R_15875001 RAL-908 2067 chr3R 16024480 16024508 chr3R 16024576 16024592 6 92 2.0 4.0 3.0 1.5 112 chr3R 16024480 intergenic not near genes chr3R 16024536 intergenic not near genes chr3R 16024592 intergenic not near genes chr3R_6_16020001 chr3R_16020001 RAL-908 2068 chr3R 16189391 16189439 chr3R 16189813 16189862 invader4 17 423 4.0 4.0 4.0 3.4 471 chr3R 16189391 intron sra + chr3R 16189626 intron sra + chr3R 16189862 intron sra + chr3R_17_16185001 chr3R_16185001 RAL-908 2069 chr3R 16246522 16246551 chr3R 16246618 16246647 5 96 0.0 8.5 4.2 1.0 125 chr3R 16246522 intron tara + chr3R 16246584 intron tara + chr3R 16246647 intron tara + chr3R_5_16245001 chr3R_16245001 RAL-908 2070 chr3R 16287393 16287431 chr3R 16287476 16287529 10 95 4.0 7.0 5.5 1.5 136 chr3R 16287393 intron gish + chr3R 16287461 intron gish + chr3R 16287529 intron gish + chr3R_10_16285001 chr3R_16285001 RAL-908 2071 chr3R 16374273 16374324 chr3R 16374410 16374461 23 136 5.0 4.5 4.8 4.0 188 chr3R 16374273 intergenic ss - chr3R 16374367 intergenic ss - chr3R 16374461 3` UTR ss - chr3R_23_16370001 chr3R_16370001 RAL-908 2072 chr3R 16472569 16472597 chr3R 16472655 16472667 4 81 4.0 1.5 2.8 1.1 98 chr3R 16472569 intergenic Gyc-89Da + chr3R 16472618 5` UTR Gyc-89Da + chr3R 16472667 5` UTR Gyc-89Da + chr3R_4_16470001 chr3R_16470001 RAL-908 2073 chr3R 16564280 16564319 chr3R 16564395 16564433 7 114 4.5 4.5 4.5 1.3 153 chr3R 16564280 intron CG42342 + chr3R 16564356 intron CG42342 + chr3R 16564433 intron CG42342 + chr3R_7_16560001 chr3R_16560001 RAL-908 2074 chr3R 16620370 16620398 chr3R 16620530 16620558 9 160 1.5 6.0 3.8 1.9 188 chr3R 16620370 intergenic CG14893 +,CG17560 + chr3R 16620464 intergenic CG14893 + chr3R 16620558 intergenic CG14893 + chr3R_9_16620001 chr3R_16620001 RAL-908 2075 chr3R 16725771 16725808 chr3R 16725869 16725909 12 100 9.0 5.0 7.0 1.5 138 chr3R 16725771 intron Ubx - chr3R 16725840 intron Ubx - chr3R 16725909 intron Ubx - chr3R_12_16725001 chr3R_16725001 RAL-908 2076 chr3R 16734859 16734891 chr3R 16734962 16734994 8 101 0.0 6.5 3.2 1.9 135 chr3R 16734859 intergenic Ubx - chr3R 16734926 intergenic Ubx - chr3R 16734994 intergenic not near genes chr3R_8_16730001 chr3R_16730001 RAL-908 2077 chr3R 16743958 16743976 chr3R 16744074 16744092 8 116 6.5 1.0 3.8 1.7 134 chr3R 16743958 intron bxd - chr3R 16744025 intron bxd - chr3R 16744092 intron bxd - chr3R_8_16740001 chr3R_16740001 RAL-908 2078 chr3R 16756317 16756345 chr3R 16762525 16762550 diver 7 6209 4.0 2.5 3.2 1.7 6233 chr3R 16756317 intron bxd - chr3R 16759434 intron bxd - chr3R 16762550 intron bxd - chr3R_7_16755001 chr3R_16755001 RAL-908 2079 chr3R 16796014 16796049 chr3R 16796565 16796598 7 553 1.0 1.0 1.0 3.5 584 chr3R 16796014 intergenic not near genes chr3R 16796306 intergenic not near genes chr3R 16796598 intergenic not near genes chr3R_7_16795001 chr3R_16795001 RAL-908 2080 chr3R 16845137 16845177 chr3R 16845245 16845271 12 106 0.0 5.0 2.5 3.4 134 chr3R 16845137 intron iab-8 - chr3R 16845204 intron iab-8 - chr3R 16845271 intron iab-8 - chr3R_12_16845001 chr3R_16845001 RAL-908 2081 chr3R 16856596 16856610 chr3R 16856722 16856739 6 128 9.5 0.0 4.8 1.0 143 chr3R 16856596 intron iab-8 - chr3R 16856668 intron iab-8 - chr3R 16856739 intron iab-8 - chr3R_6_16855001 chr3R_16855001 RAL-908 2082 chr3R 16860334 16860365 chr3R 16860431 16860462 7 97 1.0 0.5 0.8 3.9 128 chr3R 16860334 intron iab-8 - chr3R 16860398 intron iab-8 - chr3R 16860462 intron iab-8 - chr3R_7_16860001 chr3R_16860001 RAL-908 2083 chr3R 17022544 17022578 chr3R 17022639 17022690 12 109 1.0 3.0 2.0 4.0 146 chr3R 17022544 intron Pxd + chr3R 17022617 intron Pxd + chr3R 17022690 intron Pxd + chr3R_12_17020001 chr3R_17020001 RAL-908 2084 chr3R 17067493 17067534 chr3R 17067596 17067637 17 103 2.5 3.0 2.8 4.5 144 chr3R 17067493 intron Dad + chr3R 17067565 intron Dad + chr3R 17067637 intron Dad + chr3R_17_17065001 chr3R_17065001 RAL-908 2085 chr3R 17101392 17101440 chr3R 17101494 17101542 14 98 5.0 1.0 3.0 3.5 150 chr3R 17101392 exon cher - chr3R 17101467 intron cher - chr3R 17101542 intron cher - chr3R_14_17100001 chr3R_17100001 RAL-908 2086 chr3R 17121515 17121556 chr3R 17121716 17121771 13 214 5.0 0.5 2.8 3.4 256 chr3R 17121515 intron cher - chr3R 17121643 intron,exon cher -,CG42779 + chr3R 17121771 intron,exon cher -,CG42779 + chr3R_13_17120001 chr3R_17120001 RAL-908 2087 chr3R 17144001 17144051 chr3R 17144109 17144153 13 107 3.0 4.0 3.5 2.9 152 chr3R 17144001 intergenic m-cup - chr3R 17144077 intergenic m-cup - chr3R 17144153 intergenic m-cup - chr3R_13_17140001 chr3R_17140001 RAL-908 2088 chr3R 17184716 17184757 chr3R 17184812 17184823 15 93 0.5 2.5 1.5 6.0 107 chr3R 17184716 intron Mur89F - chr3R 17184770 intron Mur89F - chr3R 17184823 intron Mur89F - chr3R_15_17180001 chr3R_17180001 RAL-908 2089 chr3R 17208847 17208851 chr3R 17208943 17208947 4 96 8.0 3.0 5.5 0.6 100 chr3R 17208847 intergenic not near genes chr3R 17208897 intergenic not near genes chr3R 17208947 intergenic not near genes chr3R_4_17205001 chr3R_17205001 RAL-908 2090 chr3R 17209687 17209708 chr3R 17209795 17209816 5 108 4.5 8.0 6.2 0.7 129 chr3R 17209687 intergenic not near genes chr3R 17209752 intergenic not near genes chr3R 17209816 intergenic not near genes chr3R_5_17205001 chr3R_17205001 RAL-908 2091 chr3R 17294653 17294703 chr3R 17295101 17295153 BS 5 449 3.0 0.5 1.8 1.8 500 chr3R 17294653 intergenic not near genes chr3R 17294903 intergenic not near genes chr3R 17295153 intergenic not near genes chr3R_5_17290001 chr3R_17290001 RAL-908 2092 chr3R 17346677 17346713 chr3R 17348260 17348296 F-element 13 1583 7.5 6.0 6.8 1.7 1619 chr3R 17346677 intron beat-IIa - chr3R 17347486 intron beat-IIa - chr3R 17348296 intron beat-IIa - chr3R_13_17345001 chr3R_17345001 RAL-908 2093 chr3R 17353428 17353481 chr3R 17353525 17353578 15 95 2.0 2.0 2.0 5.0 150 chr3R 17353428 intron beat-IIa - chr3R 17353503 intron beat-IIa - chr3R 17353578 intron beat-IIa - chr3R_15_17350001 chr3R_17350001 RAL-908 2094 chr3R 17416583 17416634 chr3R 17416716 17416767 15 131 2.0 5.0 3.5 3.3 184 chr3R 17416583 intergenic CG5866 + chr3R 17416675 intergenic CG5866 + chr3R 17416767 intergenic CG5866 + chr3R_15_17415001 chr3R_17415001 RAL-908 2095 chr3R 17452644 17452671 chr3R 17452740 17452767 4 96 0.0 5.0 2.5 1.1 123 chr3R 17452644 intergenic not near genes chr3R 17452706 intergenic not near genes chr3R 17452767 intergenic not near genes chr3R_4_17450001 chr3R_17450001 RAL-908 2096 chr3R 17461179 17461221 chr3R 17461281 17461323 15 100 1.5 3.0 2.2 4.7 144 chr3R 17461179 intergenic not near genes chr3R 17461251 intergenic not near genes chr3R 17461323 intergenic not near genes chr3R_15_17460001 chr3R_17460001 RAL-908 2097 chr3R 17497942 17497993 chr3R 17498048 17498099 11 105 1.0 3.5 2.2 3.4 157 chr3R 17497942 intron Dscam3 - chr3R 17498020 intron Dscam3 - chr3R 17498099 intron Dscam3 - chr3R_11_17495001 chr3R_17495001 RAL-908 2098 chr3R 17500610 17500646 chr3R 17501191 17501218 8 578 3.0 6.0 4.5 1.5 608 chr3R 17500610 intron Dscam3 - chr3R 17500914 intron Dscam3 - chr3R 17501218 intron Dscam3 - chr3R_8_17500001 chr3R_17500001 RAL-908 2099 chr3R 17521569 17521589 chr3R 17521724 17521751 6 165 0.0 4.0 2.0 2.0 182 chr3R 17521569 intergenic not near genes chr3R 17521660 intergenic not near genes chr3R 17521751 intergenic not near genes chr3R_6_17520001 chr3R_17520001 RAL-908 2100 chr3R 17584835 17584877 chr3R 17585027 17585069 13 189 4.0 1.5 2.8 3.4 234 chr3R 17584835 intergenic not near genes chr3R 17584952 intergenic not near genes chr3R 17585069 intergenic not near genes chr3R_13_17580001 chr3R_17580001 RAL-908 2101 chr3R 17591276 17591318 chr3R 17591727 17591773 F-element 5 447 3.0 3.0 3.0 1.2 497 chr3R 17591276 intergenic not near genes chr3R 17591524 intergenic not near genes chr3R 17591773 intergenic not near genes chr3R_5_17590001 chr3R_17590001 RAL-908 2102 chr3R 17624954 17624971 chr3R 17625049 17625067 5 94 4.0 3.0 3.5 1.1 113 chr3R 17624954 intergenic AttD + chr3R 17625010 intergenic AttD + chr3R 17625067 intergenic AttD + chr3R_5_17625001 chr3R_17625001 RAL-908 2103 chr3R 17638304 17638347 chr3R 17638810 17638853 roo 27 506 3.0 6.5 4.8 4.7 549 chr3R 17638304 intron CG43175 + chr3R 17638578 intron CG43175 + chr3R 17638853 intron,intron CG43175 +,CR45222 + chr3R_27_17635001 chr3R_17635001 RAL-908 2104 chr3R 17723268 17723275 chr3R 17723360 17723368 4 106 0.0 4.0 2.0 1.3 100 chr3R 17723268 intergenic Pxt + chr3R 17723318 intergenic Pxt + chr3R 17723368 intergenic Pxt + chr3R_4_17720001 chr3R_17720001 RAL-908 2105 chr3R 17734118 17734127 chr3R 17734227 17734236 4 109 3.0 3.0 3.0 1.0 118 chr3R 17734118 3` UTR CG14321 + chr3R 17734177 3` UTR CG14321 + chr3R 17734236 3` UTR CG14321 + chr3R_4_17730001 chr3R_17730001 RAL-908 2106 chr3R 17734823 17734856 chr3R 17734956 17734989 11 131 5.5 0.0 2.8 2.9 166 chr3R 17734823 intergenic CG14321 + chr3R 17734906 intergenic not near genes chr3R 17734989 intergenic not near genes chr3R_11_17730001 chr3R_17730001 RAL-908 2107 chr3R 17746575 17746613 chr3R 17746671 17746693 8 93 4.5 1.0 2.8 2.1 118 chr3R 17746575 3` UTR TyrRII + chr3R 17746634 3` UTR TyrRII + chr3R 17746693 3` UTR TyrRII + chr3R_8_17745001 chr3R_17745001 RAL-908 2108 chr3R 17748721 17748762 chr3R 17748867 17748898 11 137 21.5 19.5 20.5 0.5 177 chr3R 17748721 intergenic not near genes chr3R 17748810 intergenic not near genes chr3R 17748898 intergenic not near genes chr3R_11_17745001 chr3R_17745001 RAL-908 2109 chr3R 17773372 17773388 chr3R 17773472 17773488 5 100 3.0 2.0 2.5 1.4 116 chr3R 17773372 intron CG43102 - chr3R 17773430 intron CG43102 - chr3R 17773488 exon CG43102 - chr3R_5_17770001 chr3R_17770001 RAL-908 2110 chr3R 17797859 17797884 chr3R 17800048 17800073 4 2193 15.0 18.5 16.8 0.2 2214 chr3R 17797859 exon CG7379 - chr3R 17798966 3` UTR CG17803 - chr3R 17800073 exon CG17803 - chr3R_4_17795001 chr3R_17795001 RAL-908 2111 chr3R 17859428 17859469 chr3R 17859532 17859573 4 103 2.0 2.0 2.0 1.3 145 chr3R 17859428 intron tinc + chr3R 17859500 intron tinc + chr3R 17859573 intron tinc + chr3R_4_17855001 chr3R_17855001 RAL-908 2112 chr3R 17895322 17895377 chr3R 17895431 17895488 14 109 6.0 1.0 3.5 3.1 166 chr3R 17895322 intron Rim - chr3R 17895405 intron Rim - chr3R 17895488 intron Rim - chr3R_14_17895001 chr3R_17895001 RAL-908 2113 chr3R 17899070 17899088 chr3R 17899168 17899186 7 98 4.5 4.0 4.2 1.3 116 chr3R 17899070 intron Rim - chr3R 17899128 intron Rim - chr3R 17899186 intron Rim - chr3R_7_17895001 chr3R_17895001 RAL-908 2114 chr3R 17925842 17925878 chr3R 17927324 17927365 hobo 7 1483 2.0 3.0 2.5 2.0 1523 chr3R 17925842 intron cpo + chr3R 17926604 intron cpo + chr3R 17927365 intron cpo + chr3R_7_17925001 chr3R_17925001 RAL-908 2115 chr3R 17954855 17954884 chr3R 17954945 17954984 7 97 4.5 1.0 2.8 1.8 129 chr3R 17954855 intron cpo + chr3R 17954920 intron cpo + chr3R 17954984 intron cpo + chr3R_7_17950001 chr3R_17950001 RAL-908 2116 chr3R 18010607 18010633 chr3R 18010713 18010739 7 103 4.5 4.0 4.2 1.3 132 chr3R 18010607 intron cpo + chr3R 18010673 intron cpo + chr3R 18010739 intron cpo + chr3R_7_18010001 chr3R_18010001 RAL-908 2117 chr3R 18041738 18041759 chr3R 18041835 18041855 11 97 0.0 0.0 0.0 11.0 117 chr3R 18041738 intergenic not near genes chr3R 18041796 intergenic not near genes chr3R 18041855 intergenic not near genes chr3R_11_18040001 chr3R_18040001 RAL-908 2118 chr3R 18061427 18061459 chr3R 18061538 18061571 6 111 5.0 0.0 2.5 1.7 144 chr3R 18061427 intergenic not near genes chr3R 18061499 intergenic not near genes chr3R 18061571 intergenic not near genes chr3R_6_18060001 chr3R_18060001 RAL-908 2119 chr3R 18061554 18061579 chr3R 18063148 18063167 F-element 6 1593 0.0 0.0 0.0 6.0 1613 chr3R 18061554 intergenic not near genes chr3R 18062360 intergenic not near genes chr3R 18063167 intergenic not near genes chr3R_6_18060001 chr3R_18060001 RAL-908 2120 chr3R 18114712 18114758 chr3R 18114912 18114957 9 195 1.0 2.5 1.8 3.2 245 chr3R 18114712 intron sr + chr3R 18114834 intron sr + chr3R 18114957 intron sr + chr3R_9_18110001 chr3R_18110001 RAL-908 2121 chr3R 18136218 18136249 chr3R 18136352 18136383 11 133 4.0 2.0 3.0 2.8 165 chr3R 18136218 intergenic not near genes chr3R 18136300 intergenic not near genes chr3R 18136383 intergenic not near genes chr3R_11_18135001 chr3R_18135001 RAL-908 2122 chr3R 18157421 18157615 chr3R 18157526 18157743 4 122 0.0 0.0 0.0 4.0 322 chr3R 18157421 intergenic CR45103 + chr3R 18157582 intergenic CR45103 + chr3R 18157743 5` UTR CR45103 + chr3R_4_18155001 chr3R_18155001 RAL-908 2123 chr3R 18235194 18235237 chr3R 18235390 18235433 22 191 4.0 4.5 4.2 4.2 239 chr3R 18235194 intergenic not near genes chr3R 18235314 intergenic not near genes chr3R 18235433 intergenic not near genes chr3R_22_18235001 chr3R_18235001 RAL-908 2124 chr3R 18331762 18331769 chr3R 18333276 18333283 hopper2 4 1514 14.0 4.5 9.2 0.4 1521 chr3R 18331762 3` UTR CG15803 - chr3R 18332522 intron CG15803 - chr3R 18333283 3` UTR CG15803 - chr3R_4_18330001 chr3R_18330001 RAL-908 2125 chr3R 18472265 18472296 chr3R 18472385 18472417 12 120 4.5 3.0 3.8 2.5 152 chr3R 18472265 intron fru - chr3R 18472341 intron fru - chr3R 18472417 intron fru - chr3R_12_18470001 chr3R_18470001 RAL-908 2126 chr3R 18473226 18473249 chr3R 18473329 18473350 4 104 0.0 0.0 0.0 4.0 124 chr3R 18473226 intron fru - chr3R 18473288 intron fru - chr3R 18473350 intron fru - chr3R_4_18470001 chr3R_18470001 RAL-908 2127 chr3R 18501583 18501621 chr3R 18501684 18501713 10 100 2.5 7.5 5.0 1.7 130 chr3R 18501583 intron fru - chr3R 18501648 intron fru - chr3R 18501713 intron fru - chr3R_10_18500001 chr3R_18500001 RAL-908 2128 chr3R 18567580 18567617 chr3R 18567692 18567729 7 109 1.5 4.5 3.0 1.8 149 chr3R 18567580 intergenic not near genes chr3R 18567654 intergenic not near genes chr3R 18567729 intergenic not near genes chr3R_7_18565001 chr3R_18565001 RAL-908 2129 chr3R 18606505 18606526 chr3R 18610747 18610768 F-element 6 4242 0.5 3.0 1.8 2.1 4263 chr3R 18606505 intron,intron qin +,CG14304 - chr3R 18608636 intron,intron qin +,CG14304 - chr3R 18610768 intron,intron qin +,CG14304 - chr3R_6_18605001 chr3R_18605001 RAL-908 2130 chr3R 18615354 18615396 chr3R 18615466 18615508 7 111 2.0 5.0 3.5 1.6 154 chr3R 18615354 intron,intron qin +,CG14304 - chr3R 18615431 intron,intron qin +,CG14304 - chr3R 18615508 intron,intron qin +,CG14304 - chr3R_7_18615001 chr3R_18615001 RAL-908 2131 chr3R 18617694 18617729 chr3R 18617794 18617829 11 100 4.5 4.5 4.5 2.0 135 chr3R 18617694 intron,intron qin +,CG14304 - chr3R 18617762 intron,intron qin +,CG14304 - chr3R 18617829 intron,intron qin +,CG14304 - chr3R_11_18615001 chr3R_18615001 RAL-908 2132 chr3R 18628860 18629036 chr3R 18629004 18629146 7 125 0.0 0.0 0.0 7.0 286 chr3R 18628860 intron qin + chr3R 18629003 intron qin + chr3R 18629146 intron qin + chr3R_7_18625001 chr3R_18625001 RAL-908 2133 chr3R 18766759 18766797 chr3R 18766857 18766895 10 98 3.0 5.0 4.0 2.0 136 chr3R 18766759 intron CG7720 - chr3R 18766827 intron CG7720 - chr3R 18766895 intron CG7720 - chr3R_10_18765001 chr3R_18765001 RAL-908 2134 chr3R 18782747 18782766 chr3R 18782861 18782880 8 114 3.0 7.5 5.2 1.3 133 chr3R 18782747 intron CG7720 - chr3R 18782814 intron CG7720 - chr3R 18782880 intron CG7720 - chr3R_8_18780001 chr3R_18780001 RAL-908 2135 chr3R 18792797 18792834 chr3R 18792900 18792937 8 100 3.0 0.0 1.5 3.2 140 chr3R 18792797 intron CG7720 - chr3R 18792867 intron CG7720 - chr3R 18792937 intron CG7720 - chr3R_8_18790001 chr3R_18790001 RAL-908 2136 chr3R 18802109 18802158 chr3R 18802214 18802259 15 101 1.5 4.5 3.0 3.8 150 chr3R 18802109 3` UTR CG18208 - chr3R 18802184 3` UTR CG18208 - chr3R 18802259 3` UTR CG18208 - chr3R_15_18800001 chr3R_18800001 RAL-908 2137 chr3R 18807313 18807334 chr3R 18807409 18807430 6 96 2.0 0.0 1.0 3.0 117 chr3R 18807313 intron CG18208 - chr3R 18807372 intron CG18208 - chr3R 18807430 intron CG18208 - chr3R_6_18805001 chr3R_18805001 RAL-908 2138 chr3R 18812071 18812109 chr3R 18812169 18812197 13 96 1.0 5.5 3.2 3.1 126 chr3R 18812071 intron CG18208 - chr3R 18812134 intron CG18208 - chr3R 18812197 intron CG18208 - chr3R_13_18810001 chr3R_18810001 RAL-908 2139 chr3R 18860108 18860130 chr3R 18860214 18860229 4 104 3.5 0.0 1.8 1.4 121 chr3R 18860108 intergenic not near genes chr3R 18860168 intergenic not near genes chr3R 18860229 intergenic not near genes chr3R_4_18860001 chr3R_18860001 RAL-908 2140 chr3R 18868597 18868621 chr3R 18868695 18868702 4 91 7.0 4.0 5.5 0.6 105 chr3R 18868597 intergenic not near genes chr3R 18868650 intergenic not near genes chr3R 18868702 intergenic not near genes chr3R_4_18865001 chr3R_18865001 RAL-908 2141 chr3R 18902138 18902188 chr3R 18902412 18902462 12 276 17.0 19.5 18.2 0.6 324 chr3R 18902138 exon CG14294 - chr3R 18902300 intergenic CG14294 -,CG34284 - chr3R 18902462 exon CG34284 - chr3R_12_18900001 chr3R_18900001 RAL-908 2142 chr3R 18965185 18965233 chr3R 18965398 18965446 9 209 0.5 3.5 2.0 3.0 261 chr3R 18965185 intron,intron CG42613 +,CG43732 + chr3R 18965316 intron,intron CG42613 +,CG43732 + chr3R 18965446 intron,intron CG42613 +,CG43732 + chr3R_9_18965001 chr3R_18965001 RAL-908 2143 chr3R 19014077 19014122 chr3R 19014177 19014222 7 93 3.5 2.5 3.0 1.8 145 chr3R 19014077 intron gukh + chr3R 19014150 intron gukh + chr3R 19014222 intron gukh + chr3R_7_19010001 chr3R_19010001 RAL-908 2144 chr3R 19140266 19140289 chr3R 19140710 19140722 6 454 5.0 0.5 2.8 1.6 456 chr3R 19140266 3` UTR Ppcs - chr3R 19140494 3` UTR Ppcs - chr3R 19140722 3` UTR Ppcs - chr3R_6_19140001 chr3R_19140001 RAL-908 2145 chr3R 19159949 19159966 chr3R 19160048 19160065 4 98 9.5 9.0 9.2 0.4 116 chr3R 19159949 3` UTR nos + chr3R 19160007 3` UTR nos + chr3R 19160065 3` UTR nos + chr3R_4_19160001 chr3R_19160001 RAL-908 2146 chr3R 19276913 19276940 chr3R 19277013 19277040 9 98 6.0 1.5 3.8 1.9 127 chr3R 19276913 intergenic not near genes chr3R 19276976 intergenic not near genes chr3R 19277040 intergenic not near genes chr3R_9_19275001 chr3R_19275001 RAL-908 2147 chr3R 19290547 19290569 chr3R 19290633 19290665 7 92 1.5 4.0 2.8 1.8 118 chr3R 19290547 intergenic not near genes chr3R 19290606 intergenic not near genes chr3R 19290665 intergenic not near genes chr3R_7_19290001 chr3R_19290001 RAL-908 2148 chr3R 19340384 19340423 chr3R 19340481 19340520 8 97 3.5 5.0 4.2 1.5 136 chr3R 19340384 intergenic not near genes chr3R 19340452 intergenic not near genes chr3R 19340520 intergenic not near genes chr3R_8_19340001 chr3R_19340001 RAL-908 2149 chr3R 19344645 19344696 chr3R 19344800 19344817 11 152 0.5 3.0 1.8 3.9 172 chr3R 19344645 intergenic not near genes chr3R 19344731 intergenic not near genes chr3R 19344817 intergenic not near genes chr3R_11_19340001 chr3R_19340001 RAL-908 2150 chr3R 19418392 19418431 chr3R 19418504 19418543 7 112 4.0 0.5 2.2 2.2 151 chr3R 19418392 intron CG31221 + chr3R 19418468 intron CG31221 + chr3R 19418543 intron CG31221 + chr3R_7_19415001 chr3R_19415001 RAL-908 2151 chr3R 19435496 19435540 chr3R 19435792 19435836 10 294 5.5 1.5 3.5 2.2 340 chr3R 19435496 intron CG31221 + chr3R 19435666 intron CG31221 + chr3R 19435836 intron CG31221 + chr3R_10_19435001 chr3R_19435001 RAL-908 2152 chr3R 19453832 19453855 chr3R 19454002 19454025 7 168 3.0 1.0 2.0 2.3 193 chr3R 19453832 intron CG31221 + chr3R 19453928 intron CG31221 + chr3R 19454025 intron CG31221 + chr3R_7_19450001 chr3R_19450001 RAL-908 2153 chr3R 19466159 19466196 chr3R 19467978 19468015 11 1819 18.5 24.0 21.2 0.5 1856 chr3R 19466159 intron Dys + chr3R 19467087 intron Dys + chr3R 19468015 intron Dys + chr3R_11_19465001 chr3R_19465001 RAL-908 2154 chr3R 19502188 19502224 chr3R 19502285 19502321 13 96 2.5 1.5 2.0 4.3 133 chr3R 19502188 intron Dys + chr3R 19502254 intron Dys + chr3R 19502321 intron Dys + chr3R_13_19500001 chr3R_19500001 RAL-908 2155 chr3R 19532204 19532246 chr3R 19532298 19532342 13 96 3.5 3.5 3.5 2.9 138 chr3R 19532204 intron Dys + chr3R 19532273 intron Dys + chr3R 19532342 intron Dys + chr3R_13_19530001 chr3R_19530001 RAL-908 2156 chr3R 19550045 19550100 chr3R 19550174 19550229 4 124 1.0 1.5 1.2 1.8 184 chr3R 19550045 intron Dys + chr3R 19550137 intron Dys + chr3R 19550229 intron Dys + chr3R_4_19550001 chr3R_19550001 RAL-908 2157 chr3R 19590627 19590647 chr3R 19590739 19590759 7 112 1.0 3.0 2.0 2.3 132 chr3R 19590627 exon Dys + chr3R 19590693 intron Dys + chr3R 19590759 exon Dys + chr3R_7_19590001 chr3R_19590001 RAL-908 2158 chr3R 19602745 19602780 chr3R 19602843 19602878 18 98 5.5 5.5 5.5 2.8 133 chr3R 19602745 intergenic CG7333 + chr3R 19602812 intergenic CG7333 + chr3R 19602878 intergenic CG7333 +,CG7342 + chr3R_18_19600001 chr3R_19600001 RAL-908 2159 chr3R 19702307 19702355 chr3R 19702403 19702432 12 99 3.0 0.0 1.5 4.8 125 chr3R 19702307 intergenic not near genes chr3R 19702370 intergenic not near genes chr3R 19702432 intergenic not near genes chr3R_12_19700001 chr3R_19700001 RAL-908 2160 chr3R 19716212 19716235 chr3R 19716309 19716332 11 97 0.5 0.0 0.2 9.2 120 chr3R 19716212 intergenic CG34286 - chr3R 19716272 intergenic CG34286 - chr3R 19716332 intergenic CG34286 - chr3R_11_19715001 chr3R_19715001 RAL-908 2161 chr3R 19824489 19824538 chr3R 19824603 19824652 11 114 5.0 3.5 4.2 2.1 163 chr3R 19824489 intron bnl - chr3R 19824570 intron bnl - chr3R 19824652 intron bnl - chr3R_11_19820001 chr3R_19820001 RAL-908 2162 chr3R 19908279 19908303 chr3R 19908383 19908407 4 104 1.0 3.0 2.0 1.3 128 chr3R 19908279 intron RhoGAP92B + chr3R 19908343 intron RhoGAP92B + chr3R 19908407 intron,3` UTR RhoGAP92B +,CR45048 - chr3R_4_19905001 chr3R_19905001 RAL-908 2163 chr3R 19950015 19950061 chr3R 19950113 19950159 6 98 2.5 2.5 2.5 1.7 144 chr3R 19950015 intron Hs6st - chr3R 19950087 intron Hs6st - chr3R 19950159 intron Hs6st - chr3R_6_19950001 chr3R_19950001 RAL-908 2164 chr3R 20008802 20008846 chr3R 20008903 20008947 17 100 6.0 4.5 5.2 2.7 145 chr3R 20008802 intergenic MED25 +,Hs6st - chr3R 20008874 intergenic MED25 +,Hs6st - chr3R 20008947 5` UTR MED25 + chr3R_17_20005001 chr3R_20005001 RAL-908 2165 chr3R 20060638 20060653 chr3R 20060741 20060756 4 103 4.5 7.0 5.8 0.6 118 chr3R 20060638 intergenic not near genes chr3R 20060697 intergenic not near genes chr3R 20060756 intergenic not near genes chr3R_4_20060001 chr3R_20060001 RAL-908 2166 chr3R 20077019 20077069 chr3R 20077125 20077163 12 105 4.0 4.0 4.0 2.4 144 chr3R 20077019 intergenic not near genes chr3R 20077091 intergenic not near genes chr3R 20077163 intergenic not near genes chr3R_12_20075001 chr3R_20075001 RAL-908 2167 chr3R 20087116 20087137 chr3R 20087230 20087251 4 114 7.0 0.0 3.5 0.9 135 chr3R 20087116 intergenic not near genes chr3R 20087184 intergenic not near genes chr3R 20087251 intergenic not near genes chr3R_4_20085001 chr3R_20085001 RAL-908 2168 chr3R 20109517 20109566 chr3R 20114741 20114792 copia 7 5226 2.5 1.5 2.0 2.3 5275 chr3R 20109517 intergenic not near genes chr3R 20112154 intergenic not near genes chr3R 20114792 intergenic CG10887 + chr3R_7_20110001 chr3R_20110001 RAL-908 2169 chr3R 20124555 20124595 chr3R 20124662 20124702 16 106 4.5 4.5 4.5 2.9 147 chr3R 20124555 intergenic not near genes chr3R 20124628 intergenic not near genes chr3R 20124702 intergenic not near genes chr3R_16_20120001 chr3R_20120001 RAL-908 2170 chr3R 20137178 20137225 chr3R 20137320 20137367 8 145 1.5 2.5 2.0 2.7 189 chr3R 20137178 intergenic not near genes chr3R 20137272 intergenic not near genes chr3R 20137367 intergenic not near genes chr3R_8_20135001 chr3R_20135001 RAL-908 2171 chr3R 20149594 20149630 chr3R 20151694 20151731 6 2101 25.5 20.5 23.0 0.2 2137 chr3R 20149594 intergenic not near genes chr3R 20150662 intergenic not near genes chr3R 20151731 intergenic not near genes chr3R_6_20150001 chr3R_20150001 RAL-908 2172 chr3R 20156677 20156712 chr3R 20165867 20165902 roo 9 9188 4.5 5.0 4.8 1.6 9225 chr3R 20156677 intergenic not near genes chr3R 20161290 intergenic not near genes chr3R 20165902 intergenic not near genes chr3R_9_20160001 chr3R_20160001 RAL-908 2173 chr3R 20180688 20180720 chr3R 20180793 20180825 8 105 3.0 4.5 3.8 1.7 137 chr3R 20180688 intergenic not near genes chr3R 20180756 intergenic not near genes chr3R 20180825 intergenic not near genes chr3R_8_20180001 chr3R_20180001 RAL-908 2174 chr3R 20195683 20195720 chr3R 20195780 20195816 6 96 1.0 5.0 3.0 1.5 133 chr3R 20195683 intergenic not near genes chr3R 20195750 intergenic not near genes chr3R 20195816 intergenic not near genes chr3R_6_20195001 chr3R_20195001 RAL-908 2175 chr3R 20205556 20205593 chr3R 20205698 20205735 5 142 2.5 4.5 3.5 1.1 179 chr3R 20205556 intron Nlg4 + chr3R 20205646 intron Nlg4 + chr3R 20205735 intron Nlg4 + chr3R_5_20205001 chr3R_20205001 RAL-908 2176 chr3R 20245265 20245306 chr3R 20248895 20248936 F-element 15 3629 4.0 1.5 2.8 3.9 3671 chr3R 20245265 3` UTR Nlg4 + chr3R 20247100 intergenic not near genes chr3R 20248936 intergenic not near genes chr3R_15_20245001 chr3R_20245001 RAL-908 2177 chr3R 20252234 20252252 chr3R 20252332 20252350 11 98 0.0 0.0 0.0 11.0 116 chr3R 20252234 intergenic not near genes chr3R 20252292 intergenic cic + chr3R 20252350 intergenic cic + chr3R_11_20250001 chr3R_20250001 RAL-908 2178 chr3R 20266496 20266548 chr3R 20272987 20273039 Burdock 10 6489 4.0 4.0 4.0 2.0 6543 chr3R 20266496 intron cic + chr3R 20269768 intron cic + chr3R 20273039 intron cic + chr3R_10_20265001 chr3R_20265001 RAL-908 2179 chr3R 20282279 20282308 chr3R 20282374 20282404 7 96 1.0 4.0 2.5 2.0 125 chr3R 20282279 intron cic + chr3R 20282342 intron cic + chr3R 20282404 intron cic + chr3R_7_20280001 chr3R_20280001 RAL-908 2180 chr3R 20308176 20308219 chr3R 20308284 20308338 8 109 5.0 0.0 2.5 2.3 162 chr3R 20308176 intergenic not near genes chr3R 20308257 intergenic not near genes chr3R 20308338 intergenic not near genes chr3R_8_20305001 chr3R_20305001 RAL-908 2181 chr3R 20312835 20312884 chr3R 20312941 20312990 19 103 1.0 2.5 1.8 6.8 155 chr3R 20312835 intron CG42668 + chr3R 20312912 intron CG42668 + chr3R 20312990 intron CG42668 + chr3R_19_20310001 chr3R_20310001 RAL-908 2182 chr3R 20330978 20331029 chr3R 20331484 20331535 roo 16 506 3.0 3.5 3.2 3.8 557 chr3R 20330978 intergenic Sirt2 + chr3R 20331256 intergenic Sirt2 + chr3R 20331535 intergenic not near genes chr3R_16_20330001 chr3R_20330001 RAL-908 2183 chr3R 20406474 20406519 chr3R 20406593 20406638 11 119 2.0 2.0 2.0 3.7 164 chr3R 20406474 intron Gfrl - chr3R 20406556 intron Gfrl - chr3R 20406638 intron,3` UTR Gfrl -,CG4335 - chr3R_11_20405001 chr3R_20405001 RAL-908 2184 chr3R 20411197 20411245 chr3R 20411432 20411480 15 234 3.0 2.0 2.5 4.3 283 chr3R 20411197 exon Gfrl - chr3R 20411338 intron Gfrl - chr3R 20411480 intron Gfrl - chr3R_15_20410001 chr3R_20410001 RAL-908 2185 chr3R 20433102 20433132 chr3R 20433194 20433242 11 108 4.5 3.5 4.0 2.2 140 chr3R 20433102 intron Gfrl - chr3R 20433172 intron Gfrl - chr3R 20433242 intron Gfrl - chr3R_11_20430001 chr3R_20430001 RAL-908 2186 chr3R 20499852 20499896 chr3R 20499962 20500006 15 110 1.5 2.5 2.0 5.0 154 chr3R 20499852 intergenic Dic2 - chr3R 20499929 intergenic Dic2 - chr3R 20500006 3` UTR Dic2 - chr3R_15_20495001 chr3R_20495001 RAL-908 2187 chr3R 20512986 20513031 chr3R 20515708 20515754 opus 16 2720 5.5 4.5 5.0 2.7 2768 chr3R 20512986 intergenic not near genes chr3R 20514370 intergenic not near genes chr3R 20515754 intergenic not near genes chr3R_16_20510001 chr3R_20510001 RAL-908 2188 chr3R 20516526 20516571 chr3R 20516902 20516939 7 375 3.5 2.5 3.0 1.8 413 chr3R 20516526 intergenic not near genes chr3R 20516732 intergenic not near genes chr3R 20516939 intergenic not near genes chr3R_7_20515001 chr3R_20515001 RAL-908 2189 chr3R 20595587 20595634 chr3R 20595817 20595864 16 228 3.0 4.0 3.5 3.6 277 chr3R 20595587 intron bon + chr3R 20595726 intron bon + chr3R 20595864 intron bon + chr3R_16_20595001 chr3R_20595001 RAL-908 2190 chr3R 20686943 20686980 chr3R 20687398 20687410 6 448 5.0 0.0 2.5 1.7 467 chr3R 20686943 intergenic not near genes chr3R 20687176 intergenic not near genes chr3R 20687410 intergenic not near genes chr3R_6_20685001 chr3R_20685001 RAL-908 2191 chr3R 20703462 20703507 chr3R 20703876 20703921 20 412 6.5 5.5 6.0 2.9 459 chr3R 20703462 intron Oamb - chr3R 20703692 intron Oamb - chr3R 20703921 intron Oamb - chr3R_20_20700001 chr3R_20700001 RAL-908 2192 chr3R 20707727 20707774 chr3R 20707962 20708009 14 235 4.0 2.5 3.2 3.3 282 chr3R 20707727 intron Oamb - chr3R 20707868 intron Oamb - chr3R 20708009 intron Oamb - chr3R_14_20705001 chr3R_20705001 RAL-908 2193 chr3R 20722832 20722877 chr3R 20722979 20723024 6 146 3.0 2.0 2.5 1.7 192 chr3R 20722832 intergenic not near genes chr3R 20722928 intergenic not near genes chr3R 20723024 intergenic not near genes chr3R_6_20720001 chr3R_20720001 RAL-908 2194 chr3R 20724489 20724527 chr3R 20724599 20724619 6 104 3.0 5.5 4.2 1.2 130 chr3R 20724489 intergenic not near genes chr3R 20724554 intergenic not near genes chr3R 20724619 intergenic not near genes chr3R_6_20720001 chr3R_20720001 RAL-908 2195 chr3R 20730908 20731061 chr3R 20731028 20731169 14 111 0.0 0.0 0.0 14.0 261 chr3R 20730908 intergenic not near genes chr3R 20731038 intergenic not near genes chr3R 20731169 intergenic CG31205 + chr3R_14_20730001 chr3R_20730001 RAL-908 2196 chr3R 20787421 20787456 chr3R 20787532 20787567 9 111 2.5 4.0 3.2 2.1 146 chr3R 20787421 intron Syp + chr3R 20787494 intron Syp + chr3R 20787567 intron Syp + chr3R_9_20785001 chr3R_20785001 RAL-908 2197 chr3R 20794863 20794909 chr3R 20794968 20795016 6 106 4.5 6.5 5.5 0.9 153 chr3R 20794863 intron Syp + chr3R 20794940 intron Syp + chr3R 20795016 intron Syp + chr3R_6_20790001 chr3R_20790001 RAL-908 2198 chr3R 20824808 20824827 chr3R 20824904 20824918 10 96 9.0 5.5 7.2 1.2 110 chr3R 20824808 3` UTR AdSS - chr3R 20824863 3` UTR AdSS - chr3R 20824918 3` UTR AdSS - chr3R_10_20820001 chr3R_20820001 RAL-908 2199 chr3R 20824833 20824854 chr3R 20824901 20824950 8 92 6.5 5.0 5.8 1.2 117 chr3R 20824833 3` UTR AdSS - chr3R 20824892 3` UTR AdSS - chr3R 20824950 3` UTR AdSS - chr3R_8_20820001 chr3R_20820001 RAL-908 2200 chr3R 20848342 20848358 chr3R 20848446 20848468 5 109 3.0 4.0 3.5 1.1 126 chr3R 20848342 intergenic not near genes chr3R 20848405 intergenic not near genes chr3R 20848468 intergenic not near genes chr3R_5_20845001 chr3R_20845001 RAL-908 2201 chr3R 20850068 20850110 chr3R 20850173 20850215 27 105 1.0 5.0 3.0 6.8 147 chr3R 20850068 intergenic RpS30 + chr3R 20850142 intergenic RpS30 + chr3R 20850215 intergenic RpS30 + chr3R_27_20850001 chr3R_20850001 RAL-908 2202 chr3R 20854473 20854521 chr3R 20859282 20859292 Doc 9 4793 4.5 3.5 4.0 1.8 4819 chr3R 20854473 intron Ir93a - chr3R 20856882 intron Ir93a - chr3R 20859292 exon Ir93a - chr3R_9_20855001 chr3R_20855001 RAL-908 2203 chr3R 20874516 20874550 chr3R 20874603 20874655 10 103 3.5 3.0 3.2 2.4 139 chr3R 20874516 3` UTR TotB + chr3R 20874586 intergenic TotB + chr3R 20874655 intergenic TotB + chr3R_10_20870001 chr3R_20870001 RAL-908 2204 chr3R 21014000 21014044 chr3R 21014098 21014142 16 98 5.5 6.5 6.0 2.3 142 chr3R 21014000 3` UTR Calx + chr3R 21014071 3` UTR Calx + chr3R 21014142 3` UTR Calx + chr3R_16_21010001 chr3R_21010001 RAL-908 2205 chr3R 21183236 21183263 chr3R 21183334 21183361 9 98 2.5 4.5 3.5 2.0 125 chr3R 21183236 intron SNF4Agamma + chr3R 21183298 intron SNF4Agamma + chr3R 21183361 intron SNF4Agamma + chr3R_9_21180001 chr3R_21180001 RAL-908 2206 chr3R 21239786 21239955 chr3R 21239900 21240045 10 101 0.0 0.0 0.0 10.0 259 chr3R 21239786 intergenic not near genes chr3R 21239916 intergenic not near genes chr3R 21240045 intergenic not near genes chr3R_10_21235001 chr3R_21235001 RAL-908 2207 chr3R 21245836 21245865 chr3R 21245940 21245970 8 104 8.5 5.0 6.8 1.0 134 chr3R 21245836 intergenic CG5892 + chr3R 21245903 intergenic CG5892 + chr3R 21245970 intergenic not near genes chr3R_8_21245001 chr3R_21245001 RAL-908 2208 chr3R 21287632 21287667 chr3R 21288004 21288019 5 368 2.0 1.0 1.5 2.0 387 chr3R 21287632 intron SIFaR - chr3R 21287826 intron SIFaR - chr3R 21288019 intron SIFaR - chr3R_5_21285001 chr3R_21285001 RAL-908 2209 chr3R 21322956 21322990 chr3R 21323055 21323078 7 96 2.0 0.5 1.2 3.2 122 chr3R 21322956 exon CG16791 - chr3R 21323017 intron CG16791 - chr3R 21323078 intron CG16791 - chr3R_7_21320001 chr3R_21320001 RAL-908 2210 chr3R 21330795 21330823 chr3R 21330905 21330933 9 109 5.0 7.5 6.2 1.2 138 chr3R 21330795 intron CG16791 - chr3R 21330864 intron CG16791 - chr3R 21330933 intron CG16791 - chr3R_9_21330001 chr3R_21330001 RAL-908 2211 chr3R 21383269 21383274 chr3R 21383369 21383374 4 100 0.0 3.0 1.5 1.6 105 chr3R 21383269 intergenic not near genes chr3R 21383322 intergenic not near genes chr3R 21383374 intergenic not near genes chr3R_4_21380001 chr3R_21380001 RAL-908 2212 chr3R 21464382 21464424 chr3R 21464488 21464528 10 105 4.5 4.0 4.2 1.9 146 chr3R 21464382 intergenic not near genes chr3R 21464455 intergenic not near genes chr3R 21464528 intergenic not near genes chr3R_10_21460001 chr3R_21460001 RAL-908 2213 chr3R 21471997 21472036 chr3R 21472098 21472099 11 97 4.0 4.5 4.2 2.1 102 chr3R 21471997 intergenic not near genes chr3R 21472048 intergenic not near genes chr3R 21472099 intergenic not near genes chr3R_11_21470001 chr3R_21470001 RAL-908 2214 chr3R 21494660 21494699 chr3R 21494760 21494799 8 100 4.5 1.5 3.0 2.0 139 chr3R 21494660 intergenic not near genes chr3R 21494730 intergenic not near genes chr3R 21494799 intergenic not near genes chr3R_8_21490001 chr3R_21490001 RAL-908 2215 chr3R 21505210 21505253 chr3R 21505312 21505331 7 95 1.0 2.0 1.5 2.8 121 chr3R 21505210 intron C15 + chr3R 21505270 intron C15 + chr3R 21505331 intron C15 + chr3R_7_21505001 chr3R_21505001 RAL-908 2216 chr3R 21506852 21506902 chr3R 21506958 21507002 11 105 1.0 6.0 3.5 2.4 150 chr3R 21506852 intron C15 + chr3R 21506927 intron C15 + chr3R 21507002 intron C15 + chr3R_11_21505001 chr3R_21505001 RAL-908 2217 chr3R 21518008 21518271 chr3R 21518157 21518375 8 120 0.0 0.0 0.0 8.0 367 chr3R 21518008 intergenic not near genes chr3R 21518192 intergenic not near genes chr3R 21518375 intergenic not near genes chr3R_8_21515001 chr3R_21515001 RAL-908 2218 chr3R 21519976 21520136 chr3R 21520097 21520250 29 119 1.5 1.5 1.5 11.6 274 chr3R 21519976 intergenic not near genes chr3R 21520113 intergenic not near genes chr3R 21520250 intergenic not near genes chr3R_29_21520001 chr3R_21520001 RAL-908 2219 chr3R 21608996 21609019 chr3R 21611642 21611651 NOF 5 2646 6.0 2.0 4.0 1.0 2655 chr3R 21608996 intron InR - chr3R 21610324 intron InR - chr3R 21611651 intron InR - chr3R_5_21610001 chr3R_21610001 RAL-908 2220 chr3R 21624087 21624120 chr3R 21624201 21624234 7 114 0.5 2.0 1.2 3.2 147 chr3R 21624087 intron E2f - chr3R 21624160 intron E2f - chr3R 21624234 intron E2f - chr3R_7_21620001 chr3R_21620001 RAL-908 2221 chr3R 21631106 21631159 chr3R 21631531 21631584 7 416 2.0 4.5 3.2 1.7 478 chr3R 21631106 intron E2f - chr3R 21631345 intron E2f - chr3R 21631584 intron E2f - chr3R_7_21630001 chr3R_21630001 RAL-908 2222 chr3R 21633234 21633274 chr3R 21633500 21633538 7 266 4.0 5.0 4.5 1.3 304 chr3R 21633234 intron E2f - chr3R 21633386 intron E2f - chr3R 21633538 intron E2f - chr3R_7_21630001 chr3R_21630001 RAL-908 2223 chr3R 21652527 21652573 chr3R 21652627 21652673 14 98 2.0 0.0 1.0 7.0 146 chr3R 21652527 intron E2f - chr3R 21652600 intron E2f - chr3R 21652673 intron E2f - chr3R_14_21650001 chr3R_21650001 RAL-908 2224 chr3R 21761104 21761151 chr3R 21768516 21768539 mdg1 5 7399 2.0 3.0 2.5 1.4 7435 chr3R 21761104 exon CG42335 + chr3R 21764822 intron CG42335 + chr3R 21768539 exon CG42335 + chr3R_5_21760001 chr3R_21760001 RAL-908 2225 chr3R 21790943 21790987 chr3R 21791048 21791092 14 103 5.5 5.0 5.2 2.3 149 chr3R 21790943 intron CASK - chr3R 21791018 intron CASK - chr3R 21791092 intron CASK - chr3R_14_21790001 chr3R_21790001 RAL-908 2226 chr3R 21903617 21903631 chr3R 21903734 21903748 5 117 0.0 2.0 1.0 2.5 131 chr3R 21903617 intron CG6678 + chr3R 21903682 intron CG6678 + chr3R 21903748 intron CG6678 + chr3R_5_21900001 chr3R_21900001 RAL-908 2227 chr3R 21907534 21907534 chr3R 28831801 28831802 16 6924268 20.5 17.5 19.0 0.8 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_16_25365001 chr3R_25365001 RAL-908 2228 chr3R 9620954 9620956 chr3R 21907535 21907535 4 12286580 10.0 19.5 14.8 0.3 12286581 chr3R 9620954 intron CG8312 + chr3R 15764244 intergenic not near genes chr3R 21907535 intergenic CG6678 + chr3R_4_15760001 chr3R_15760001 RAL-908 2229 chr3R 21907535 21907535 chr3R 28831801 28831802 44 6924266 20.5 17.5 19.0 2.2 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_44_25365001 chr3R_25365001 RAL-908 2230 chr3R 21907536 21907536 chr3R 28831801 28831802 32 6924266 20.5 17.5 19.0 1.6 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_32_25365001 chr3R_25365001 RAL-908 2231 chr3R 21924003 21924039 chr3R 21924100 21924130 6 102 4.5 0.5 2.5 1.7 127 chr3R 21924003 intergenic not near genes chr3R 21924066 intergenic not near genes chr3R 21924130 intergenic not near genes chr3R_6_21920001 chr3R_21920001 RAL-908 2232 chr3R 21937213 21937233 chr3R 21937310 21937330 11 95 2.0 6.0 4.0 2.2 117 chr3R 21937213 intergenic not near genes chr3R 21937272 intergenic not near genes chr3R 21937330 intergenic not near genes chr3R_11_21935001 chr3R_21935001 RAL-908 2233 chr3R 21952114 21952161 chr3R 21952219 21952266 12 105 4.0 2.5 3.2 2.9 152 chr3R 21952114 intron Eip93F + chr3R 21952190 intron Eip93F + chr3R 21952266 intron Eip93F + chr3R_12_21950001 chr3R_21950001 RAL-908 2234 chr3R 21958586 21958622 chr3R 21958696 21958732 11 109 4.0 4.5 4.2 2.1 146 chr3R 21958586 intron Eip93F + chr3R 21958659 intron Eip93F + chr3R 21958732 intron Eip93F + chr3R_11_21955001 chr3R_21955001 RAL-908 2235 chr3R 22084608 22084624 chr3R 22084717 22084733 7 109 6.5 10.0 8.2 0.8 125 chr3R 22084608 intergenic not near genes chr3R 22084670 intergenic not near genes chr3R 22084733 intergenic not near genes chr3R_7_22080001 chr3R_22080001 RAL-908 2236 chr3R 22116392 22116431 chr3R 22116779 22116817 12 387 3.5 6.5 5.0 2.0 425 chr3R 22116392 exon Ir94b - chr3R 22116604 exon Ir94b - chr3R 22116817 exon Ir94b - chr3R_12_22115001 chr3R_22115001 RAL-908 2237 chr3R 22117396 22117445 chr3R 22117492 22117541 20 96 6.5 7.0 6.8 2.6 145 chr3R 22117396 intergenic Ir94b -,Ir94c - chr3R 22117468 intergenic Ir94c -,Ir94b - chr3R 22117541 intergenic Ir94c -,Ir94b - chr3R_20_22115001 chr3R_22115001 RAL-908 2238 chr3R 22234663 22234711 chr3R 22236002 22236050 pogo 16 1337 2.0 1.0 1.5 6.4 1387 chr3R 22234663 intron SKIP + chr3R 22235356 intron SKIP + chr3R 22236050 intron SKIP + chr3R_16_22235001 chr3R_22235001 RAL-908 2239 chr3R 22239478 22239525 chr3R 22248558 22248568 roo 15 9077 4.0 5.5 4.8 2.6 9090 chr3R 22239478 intron SKIP + chr3R 22244023 intron SKIP + chr3R 22248568 intron SKIP + chr3R_15_22240001 chr3R_22240001 RAL-908 2240 chr3R 22292466 22292502 chr3R 22292566 22292602 5 100 2.0 2.5 2.2 1.6 136 chr3R 22292466 intron SKIP + chr3R 22292534 intron SKIP + chr3R 22292602 intron SKIP + chr3R_5_22290001 chr3R_22290001 RAL-908 2241 chr3R 22428562 22428604 chr3R 22428656 22428697 12 90 1.0 1.5 1.2 5.5 135 chr3R 22428562 intron CG13847 - chr3R 22428630 intron CG13847 - chr3R 22428697 intron CG13847 - chr3R_12_22425001 chr3R_22425001 RAL-908 2242 chr3R 22433071 22433102 chr3R 22433190 22433222 12 119 7.5 5.0 6.2 1.7 151 chr3R 22433071 intron CG13847 - chr3R 22433146 intron CG13847 - chr3R 22433222 intron CG13847 - chr3R_12_22430001 chr3R_22430001 RAL-908 2243 chr3R 22450553 22450571 chr3R 22453213 22453231 NOF 4 2660 2.5 6.0 4.2 0.8 2678 chr3R 22450553 intron CG34376 + chr3R 22451892 intron CG34376 + chr3R 22453231 intron CG34376 + chr3R_4_22450001 chr3R_22450001 RAL-908 2244 chr3R 22492363 22492414 chr3R 22492464 22492510 12 97 3.0 3.5 3.2 2.9 147 chr3R 22492363 3` UTR CG7045 + chr3R 22492436 intergenic CG7045 + chr3R 22492510 intergenic CG7045 +,CG7046 + chr3R_12_22490001 chr3R_22490001 RAL-908 2245 chr3R 22538434 22538470 chr3R 22538538 22538575 12 104 1.0 4.0 2.5 3.4 141 chr3R 22538434 intron CG5326 - chr3R 22538504 intron CG5326 - chr3R 22538575 intron CG5326 - chr3R_12_22535001 chr3R_22535001 RAL-908 2246 chr3R 22646903 22646949 chr3R 22647011 22647057 11 108 6.5 0.0 3.2 2.6 154 chr3R 22646903 intron wake + chr3R 22646980 intron wake + chr3R 22647057 intron wake + chr3R_11_22645001 chr3R_22645001 RAL-908 2247 chr3R 22769070 22769107 chr3R 22769167 22769204 10 96 6.5 3.0 4.8 1.7 134 chr3R 22769070 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769137 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769204 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_10_22765001 chr3R_22765001 RAL-908 2248 chr3R 22794260 22794299 chr3R 22794506 22794545 11 246 4.0 3.5 3.8 2.3 285 chr3R 22794260 intergenic CG7029 + chr3R 22794402 intergenic CG7029 + chr3R 22794545 intergenic not near genes chr3R_11_22790001 chr3R_22790001 RAL-908 2249 chr3R 22797739 22797932 chr3R 22797845 22798048 12 111 0.0 0.0 0.0 12.0 309 chr3R 22797739 intergenic not near genes chr3R 22797894 intergenic not near genes chr3R 22798048 intergenic not near genes chr3R_12_22795001 chr3R_22795001 RAL-908 2250 chr3R 22860136 22860176 chr3R 22860248 22860288 10 112 0.0 1.0 0.5 6.7 152 chr3R 22860136 intergenic not near genes chr3R 22860212 intergenic not near genes chr3R 22860288 intergenic not near genes chr3R_10_22860001 chr3R_22860001 RAL-908 2251 chr3R 22881187 22881220 chr3R 22884913 22884946 Doc 5 3726 3.0 4.5 3.8 1.0 3759 chr3R 22881187 intergenic not near genes chr3R 22883066 intergenic not near genes chr3R 22884946 intergenic not near genes chr3R_5_22880001 chr3R_22880001 RAL-908 2252 chr3R 22888176 22888208 chr3R 22888467 22888485 6 286 6.0 0.0 3.0 1.5 309 chr3R 22888176 intergenic not near genes chr3R 22888330 intergenic not near genes chr3R 22888485 intergenic not near genes chr3R_6_22885001 chr3R_22885001 RAL-908 2253 chr3R 22974269 22974304 chr3R 22974373 22974408 9 102 0.0 3.5 1.8 3.2 139 chr3R 22974269 intergenic not near genes chr3R 22974338 intergenic not near genes chr3R 22974408 intergenic not near genes chr3R_9_22970001 chr3R_22970001 RAL-908 2254 chr3R 22990355 22990383 chr3R 22990604 22990658 4 268 1.0 2.0 1.5 1.6 303 chr3R 22990355 intron,exon Nha2 -,Or94b + chr3R 22990506 intron,intron Nha2 -,Or94b + chr3R 22990658 intron Nha2 - chr3R_4_22990001 chr3R_22990001 RAL-908 2255 chr3R 23016181 23016226 chr3R 23016277 23016323 5 97 1.5 1.5 1.5 2.0 142 chr3R 23016181 intergenic not near genes chr3R 23016252 intergenic not near genes chr3R 23016323 intergenic not near genes chr3R_5_23015001 chr3R_23015001 RAL-908 2256 chr3R 23090386 23090431 chr3R 23090489 23090534 11 100 4.0 4.0 4.0 2.2 148 chr3R 23090386 intron CG13830 - chr3R 23090460 intron CG13830 - chr3R 23090534 intron CG13830 - chr3R_11_23090001 chr3R_23090001 RAL-908 2257 chr3R 23182676 23182702 chr3R 23182772 23182805 10 102 2.0 2.5 2.2 3.1 129 chr3R 23182676 intron Irk1 + chr3R 23182740 intron Irk1 + chr3R 23182805 intron Irk1 + chr3R_10_23180001 chr3R_23180001 RAL-908 2258 chr3R 23198100 23198135 chr3R 23198366 23198401 13 266 4.0 5.5 4.8 2.2 301 chr3R 23198100 intron cnc - chr3R 23198250 intron cnc - chr3R 23198401 intron cnc - chr3R_13_23195001 chr3R_23195001 RAL-908 2259 chr3R 23245983 23246020 chr3R 23246085 23246102 4 93 2.5 0.5 1.5 1.6 119 chr3R 23245983 intron CG4467 - chr3R 23246042 intron CG4467 - chr3R 23246102 intron CG4467 - chr3R_4_23245001 chr3R_23245001 RAL-908 2260 chr3R 23303611 23303656 chr3R 23303709 23303754 23 96 4.5 4.0 4.2 4.4 143 chr3R 23303611 intron pnt - chr3R 23303682 intron pnt - chr3R 23303754 intron pnt - chr3R_23_23300001 chr3R_23300001 RAL-908 2261 chr3R 23311661 23311680 chr3R 23311775 23311794 7 114 10.5 5.5 8.0 0.8 133 chr3R 23311661 intron pnt - chr3R 23311728 intron pnt - chr3R 23311794 intron pnt - chr3R_7_23310001 chr3R_23310001 RAL-908 2262 chr3R 23311681 23311706 chr3R 23311774 23311820 6 106 7.0 5.5 6.2 0.8 139 chr3R 23311681 intron pnt - chr3R 23311750 intron pnt - chr3R 23311820 intron pnt - chr3R_6_23310001 chr3R_23310001 RAL-908 2263 chr3R 23342620 23342667 chr3R 23342775 23342822 13 155 3.5 5.5 4.5 2.4 202 chr3R 23342620 intron pnt - chr3R 23342721 intron pnt - chr3R 23342822 intron pnt - chr3R_13_23340001 chr3R_23340001 RAL-908 2264 chr3R 23346830 23346871 chr3R 23346928 23346969 15 98 2.5 7.5 5.0 2.5 139 chr3R 23346830 intergenic not near genes chr3R 23346900 intergenic not near genes chr3R 23346969 intergenic not near genes chr3R_15_23345001 chr3R_23345001 RAL-908 2265 chr3R 23386306 23386350 chr3R 23386436 23386480 16 129 4.5 5.0 4.8 2.8 174 chr3R 23386306 intergenic not near genes chr3R 23386393 intergenic not near genes chr3R 23386480 intergenic not near genes chr3R_16_23385001 chr3R_23385001 RAL-908 2266 chr3R 23543466 23543511 chr3R 23543923 23543962 6 452 5.5 1.0 3.2 1.4 496 chr3R 23543466 intergenic not near genes chr3R 23543714 intergenic not near genes chr3R 23543962 intergenic not near genes chr3R_6_23540001 chr3R_23540001 RAL-908 2267 chr3R 23558394 23558401 chr3R 23560183 23560202 Bari1 5 1797 4.0 1.5 2.8 1.3 1808 chr3R 23558394 intron beat-IV + chr3R 23559298 intron beat-IV + chr3R 23560202 intron beat-IV + chr3R_5_23555001 chr3R_23555001 RAL-908 2268 chr3R 23558409 23558429 chr3R 23560179 23560230 Bari1 12 1798 1.0 1.5 1.2 5.5 1821 chr3R 23558409 intron beat-IV + chr3R 23559320 intron beat-IV + chr3R 23560230 intron beat-IV + chr3R_12_23555001 chr3R_23555001 RAL-908 2269 chr3R 23629805 23629835 chr3R 23629903 23629924 8 92 4.0 5.0 4.5 1.5 119 chr3R 23629805 intron CG31145 - chr3R 23629864 intron CG31145 - chr3R 23629924 intron CG31145 - chr3R_8_23625001 chr3R_23625001 RAL-908 2270 chr3R 23688456 23688505 chr3R 23688567 23688616 4 104 1.5 0.5 1.0 2.0 160 chr3R 23688456 intergenic SPE + chr3R 23688536 intergenic SPE +,CG10254 - chr3R 23688616 intergenic CG10254 -,SPE + chr3R_4_23685001 chr3R_23685001 RAL-908 2271 chr3R 23714691 23714737 chr3R 23714805 23714851 16 113 4.5 2.5 3.5 3.6 160 chr3R 23714691 intron nau - chr3R 23714771 intron nau - chr3R 23714851 intron nau - chr3R_16_23710001 chr3R_23710001 RAL-908 2272 chr3R 23739431 23739471 chr3R 23739544 23739585 10 112 2.0 3.0 2.5 2.9 154 chr3R 23739431 intron Hmgcr + chr3R 23739508 intron Hmgcr + chr3R 23739585 intron Hmgcr + chr3R_10_23735001 chr3R_23735001 RAL-908 2273 chr3R 23820627 23820659 chr3R 23820721 23820763 5 102 3.0 2.0 2.5 1.4 136 chr3R 23820627 5` UTR CG34355 + chr3R 23820695 5` UTR CG34355 + chr3R 23820763 5` UTR CG34355 + chr3R_5_23820001 chr3R_23820001 RAL-908 2274 chr3R 23835388 23835410 chr3R 23844556 23844580 roo 14 9170 4.0 2.5 3.2 3.3 9192 chr3R 23835388 intron CG34355 + chr3R 23839984 intron CG34355 + chr3R 23844580 intron CG34355 + chr3R_14_23835001 chr3R_23835001 RAL-908 2275 chr3R 23835417 23835433 chr3R 23844555 23844600 roo 10 9166 2.5 2.5 2.5 2.9 9183 chr3R 23835417 intron CG34355 + chr3R 23840008 intron CG34355 + chr3R 23844600 intron CG34355 + chr3R_10_23840001 chr3R_23840001 RAL-908 2276 chr3R 23851067 23851089 chr3R 23858754 23858776 opus 10 7686 4.5 12.5 8.5 1.1 7709 chr3R 23851067 3` UTR CG34355 + chr3R 23854922 intergenic not near genes chr3R 23858776 intergenic not near genes chr3R_10_23850001 chr3R_23850001 RAL-908 2277 chr3R 23944890 23944934 chr3R 23944995 23945028 13 102 1.5 4.0 2.8 3.4 138 chr3R 23944890 intron CG12268 - chr3R 23944959 intron CG12268 - chr3R 23945028 exon CG12268 - chr3R_13_23940001 chr3R_23940001 RAL-908 2278 chr3R 24021381 24021433 chr3R 24021713 24021765 14 328 1.0 2.0 1.5 5.6 384 chr3R 24021381 intron KrT95D - chr3R 24021573 intron KrT95D - chr3R 24021765 intron KrT95D - chr3R_14_24020001 chr3R_24020001 RAL-908 2279 chr3R 24041994 24042029 chr3R 24042127 24042162 6 133 2.5 6.0 4.2 1.2 168 chr3R 24041994 3` UTR spas + chr3R 24042078 3` UTR spas + chr3R 24042162 3` UTR spas + chr3R_6_24040001 chr3R_24040001 RAL-908 2280 chr3R 24072081 24072110 chr3R 24072538 24072568 jockey 6 455 5.5 5.5 5.5 0.9 487 chr3R 24072081 intron 4EHP - chr3R 24072324 intron 4EHP - chr3R 24072568 intron 4EHP - chr3R_6_24070001 chr3R_24070001 RAL-908 2281 chr3R 24076898 24076947 chr3R 24078385 24078414 hobo 11 1481 2.5 4.5 3.5 2.4 1516 chr3R 24076898 intron 4EHP - chr3R 24077656 intron 4EHP - chr3R 24078414 intron 4EHP - chr3R_11_24075001 chr3R_24075001 RAL-908 2282 chr3R 24082072 24082090 chr3R 24082180 24082198 5 108 2.0 2.5 2.2 1.6 126 chr3R 24082072 intron 4EHP - chr3R 24082135 intron 4EHP - chr3R 24082198 intron 4EHP - chr3R_5_24080001 chr3R_24080001 RAL-908 2283 chr3R 24100445 24100615 chr3R 24100560 24100833 16 202 0.0 0.0 0.0 16.0 388 chr3R 24100445 intron 4EHP - chr3R 24100639 intron 4EHP - chr3R 24100833 intron 4EHP - chr3R_16_24100001 chr3R_24100001 RAL-908 2284 chr3R 24207210 24207242 chr3R 24212306 24212338 flea 12 5096 5.5 11.0 8.2 1.3 5128 chr3R 24207210 intron twin - chr3R 24209774 intron twin - chr3R 24212338 intron twin - chr3R_12_24205001 chr3R_24205001 RAL-908 2285 chr3R 24431589 24431625 chr3R 24431678 24431724 8 98 2.5 0.0 1.2 3.6 135 chr3R 24431589 intron nAChRalpha1 - chr3R 24431656 intron nAChRalpha1 - chr3R 24431724 intron nAChRalpha1 - chr3R_8_24430001 chr3R_24430001 RAL-908 2286 chr3R 24434233 24434272 chr3R 24434324 24434370 11 96 4.0 5.5 4.8 1.9 137 chr3R 24434233 intron nAChRalpha1 - chr3R 24434302 intron nAChRalpha1 - chr3R 24434370 intron nAChRalpha1 - chr3R_11_24430001 chr3R_24430001 RAL-908 2287 chr3R 24466449 24466460 chr3R 24466547 24466558 6 98 8.0 4.0 6.0 0.9 109 chr3R 24466449 intergenic not near genes chr3R 24466504 intergenic not near genes chr3R 24466558 intergenic not near genes chr3R_6_24465001 chr3R_24465001 RAL-908 2288 chr3R 24466463 24466495 chr3R 24466543 24466593 9 95 3.5 4.0 3.8 1.9 130 chr3R 24466463 intergenic not near genes chr3R 24466528 intergenic not near genes chr3R 24466593 intergenic not near genes chr3R_9_24465001 chr3R_24465001 RAL-908 2289 chr3R 24493258 24493306 chr3R 24493507 24493552 BS 14 249 3.5 1.5 2.5 4.0 294 chr3R 24493258 intergenic not near genes chr3R 24493405 intergenic not near genes chr3R 24493552 intergenic not near genes chr3R_14_24490001 chr3R_24490001 RAL-908 2290 chr3R 24495269 24495317 chr3R 24495368 24495401 17 96 1.5 4.0 2.8 4.5 132 chr3R 24495269 intergenic not near genes chr3R 24495335 intergenic not near genes chr3R 24495401 intergenic not near genes chr3R_17_24495001 chr3R_24495001 RAL-908 2291 chr3R 24527784 24527835 chr3R 24527895 24527946 21 111 2.5 4.5 3.5 4.7 162 chr3R 24527784 intergenic CG13618 +,CG6607 + chr3R 24527865 intergenic CG6607 +,CG13618 + chr3R 24527946 intergenic CG6607 +,CG13618 + chr3R_21_24525001 chr3R_24525001 RAL-908 2292 chr3R 24624374 24624396 chr3R 24624472 24624505 7 107 3.0 4.0 3.5 1.6 131 chr3R 24624374 intron Syx18 - chr3R 24624440 intron Syx18 - chr3R 24624505 exon Syx18 - chr3R_7_24620001 chr3R_24620001 RAL-908 2293 chr3R 24667595 24667623 chr3R 24667692 24667720 5 97 4.0 0.0 2.0 1.7 125 chr3R 24667595 intron slo + chr3R 24667658 intron slo + chr3R 24667720 intron slo + chr3R_5_24665001 chr3R_24665001 RAL-908 2294 chr3R 24670141 24670180 chr3R 24670245 24670284 14 104 4.0 1.5 2.8 3.7 143 chr3R 24670141 intron slo + chr3R 24670212 intron slo + chr3R 24670284 intron slo + chr3R_14_24670001 chr3R_24670001 RAL-908 2295 chr3R 24728316 24728358 chr3R 24728509 24728551 9 193 2.5 3.5 3.0 2.2 235 chr3R 24728316 exon tok + chr3R 24728434 intron tok + chr3R 24728551 intron tok + chr3R_9_24725001 chr3R_24725001 RAL-908 2296 chr3R 24730087 24730124 chr3R 24732470 24732470 Doc 8 2377 3.5 0.0 1.8 2.9 2383 chr3R 24730087 intron tok + chr3R 24731278 intron tok + chr3R 24732470 intron tok + chr3R_8_24730001 chr3R_24730001 RAL-908 2297 chr3R 24743020 24743061 chr3R 24743125 24743166 7 99 2.5 2.5 2.5 2.0 146 chr3R 24743020 intron tok + chr3R 24743093 intron tok + chr3R 24743166 exon tok + chr3R_7_24740001 chr3R_24740001 RAL-908 2298 chr3R 24789970 24790005 chr3R 24790135 24790170 11 163 5.0 2.5 3.8 2.3 200 chr3R 24789970 intron,5` UTR Ets96B +,CG13634 - chr3R 24790070 intron,5` UTR Ets96B +,CG13634 - chr3R 24790170 intron Ets96B + chr3R_11_24790001 chr3R_24790001 RAL-908 2299 chr3R 24854871 24854913 chr3R 24854973 24855015 12 102 3.0 5.0 4.0 2.4 144 chr3R 24854871 3` UTR HdacX - chr3R 24854943 3` UTR HdacX - chr3R 24855015 3` UTR HdacX - chr3R_12_24850001 chr3R_24850001 RAL-908 2300 chr3R 24893456 24893474 chr3R 24893556 24893574 8 100 6.0 2.0 4.0 1.6 118 chr3R 24893456 intron CG31121 - chr3R 24893515 intron CG31121 - chr3R 24893574 intron CG31121 - chr3R_8_24890001 chr3R_24890001 RAL-908 2301 chr3R 24912476 24912513 chr3R 24912567 24912615 8 100 3.5 3.0 3.2 1.9 139 chr3R 24912476 intergenic not near genes chr3R 24912546 intergenic CR44267 + chr3R 24912615 intergenic CR44267 + chr3R_8_24910001 chr3R_24910001 RAL-908 2302 chr3R 24927110 24927152 chr3R 24931916 24931963 Doc 8 4808 4.5 2.0 3.2 1.9 4853 chr3R 24927110 intergenic Trf4-2 + chr3R 24929536 intergenic not near genes chr3R 24931963 intergenic CG11771 + chr3R_8_24925001 chr3R_24925001 RAL-908 2303 chr3R 25004895 25004916 chr3R 25004998 25005019 8 102 1.0 1.5 1.2 3.6 124 chr3R 25004895 intron tnc + chr3R 25004957 intron tnc + chr3R 25005019 intron tnc + chr3R_8_25000001 chr3R_25000001 RAL-908 2304 chr3R 25136380 25136393 chr3R 25136480 25136493 4 100 10.0 5.0 7.5 0.5 113 chr3R 25136380 3` UTR Bili + chr3R 25136436 3` UTR Bili + chr3R 25136493 3` UTR Bili + chr3R_4_25135001 chr3R_25135001 RAL-908 2305 chr3R 25136397 25136429 chr3R 25136478 25136529 15 99 3.0 4.0 3.5 3.3 132 chr3R 25136397 3` UTR Bili + chr3R 25136463 3` UTR Bili + chr3R 25136529 3` UTR Bili + chr3R_15_25135001 chr3R_25135001 RAL-908 2306 chr3R 25194346 25194365 chr3R 25194442 25194461 9 96 4.5 0.0 2.2 2.8 115 chr3R 25194346 intergenic not near genes chr3R 25194404 intergenic not near genes chr3R 25194461 intergenic not near genes chr3R_9_25190001 chr3R_25190001 RAL-908 2307 chr3R 25209581 25209624 chr3R 25209683 25209726 13 101 0.0 2.5 1.2 5.9 145 chr3R 25209581 intron CG13654 + chr3R 25209654 intron CG13654 + chr3R 25209726 intron CG13654 + chr3R_13_25205001 chr3R_25205001 RAL-908 2308 chr3R 25235798 25235845 chr3R 25235897 25235945 18 96 3.5 5.0 4.2 3.5 147 chr3R 25235798 intergenic CG10420 - chr3R 25235872 intergenic CG10420 - chr3R 25235945 intergenic CG10420 - chr3R_18_25235001 chr3R_25235001 RAL-908 2309 chr3R 25302133 25302183 chr3R 25302329 25302379 16 199 37.0 36.0 36.5 0.4 246 chr3R 25302133 exon CG13659 + chr3R 25302256 exon CG13659 + chr3R 25302379 intergenic CG13659 +,CG31370 + chr3R_16_25300001 chr3R_25300001 RAL-908 2310 chr3R 25368454 25368494 chr3R 25368592 25368612 11 135 3.5 0.0 1.8 3.9 158 chr3R 25368454 intron Fur1 - chr3R 25368533 intron Fur1 - chr3R 25368612 intron Fur1 - chr3R_11_25365001 chr3R_25365001 RAL-908 2311 chr3R 25377070 25377112 chr3R 25377356 25377398 17 284 4.5 2.5 3.5 3.8 328 chr3R 25377070 intron Fur1 - chr3R 25377234 intron Fur1 - chr3R 25377398 intron Fur1 - chr3R_17_25375001 chr3R_25375001 RAL-908 2312 chr3R 25411763 25411806 chr3R 25411879 25411929 8 121 1.0 6.0 3.5 1.8 166 chr3R 25411763 intron Fur1 - chr3R 25411846 intron Fur1 - chr3R 25411929 intron Fur1 - chr3R_8_25410001 chr3R_25410001 RAL-908 2313 chr3R 25422045 25422087 chr3R 25422146 25422162 6 93 3.5 0.0 1.8 2.1 117 chr3R 25422045 intron Fur1 - chr3R 25422104 intron Fur1 - chr3R 25422162 intron Fur1 - chr3R_6_25420001 chr3R_25420001 RAL-908 2314 chr3R 25431424 25431447 chr3R 25431530 25431553 4 105 5.0 3.0 4.0 0.8 129 chr3R 25431424 intron Fur1 - chr3R 25431488 intron Fur1 - chr3R 25431553 intron Fur1 - chr3R_4_25430001 chr3R_25430001 RAL-908 2315 chr3R 25464131 25464177 chr3R 25464359 25464405 13 228 4.5 3.5 4.0 2.6 274 chr3R 25464131 intron Fur1 - chr3R 25464268 intron Fur1 - chr3R 25464405 intron Fur1 - chr3R_13_25460001 chr3R_25460001 RAL-908 2316 chr3R 25526231 25526280 chr3R 25526328 25526365 11 95 5.0 4.0 4.5 2.0 134 chr3R 25526231 intron msi + chr3R 25526298 intron msi + chr3R 25526365 intron msi + chr3R_11_25525001 chr3R_25525001 RAL-908 2317 chr3R 25528021 25528043 chr3R 25528144 25528161 5 122 8.0 4.0 6.0 0.7 140 chr3R 25528021 intron msi + chr3R 25528091 intron msi + chr3R 25528161 intron msi + chr3R_5_25525001 chr3R_25525001 RAL-908 2318 chr3R 7773344 7773344 chr3R 25538123 25538124 10 17764780 19.5 14.0 16.8 0.6 17764780 chr3R 7773344 intergenic not near genes chr3R 16655734 intergenic modSP - chr3R 25538124 intron msi + chr3R_10_16655001 chr3R_16655001 RAL-908 2319 chr3R 25716360 25716408 chr3R 25716458 25716506 19 98 3.5 4.5 4.0 3.8 146 chr3R 25716360 intron LpR2 - chr3R 25716433 intron LpR2 - chr3R 25716506 intron LpR2 - chr3R_19_25715001 chr3R_25715001 RAL-908 2320 chr3R 25725811 25725860 chr3R 25734991 25735040 roo 18 9180 6.5 4.0 5.2 2.9 9229 chr3R 25725811 intron LpR2 - chr3R 25730426 intron LpR2 - chr3R 25735040 intron LpR2 - chr3R_18_25730001 chr3R_25730001 RAL-908 2321 chr3R 25765857 25765908 chr3R 25765956 25765986 12 92 2.5 3.5 3.0 3.0 129 chr3R 25765857 intergenic not near genes chr3R 25765922 intergenic not near genes chr3R 25765986 intergenic not near genes chr3R_12_25765001 chr3R_25765001 RAL-908 2322 chr3R 25801251 25801292 chr3R 25802255 25802286 7 1000 2.0 3.5 2.8 1.8 1035 chr3R 25801251 intergenic not near genes chr3R 25801768 intergenic not near genes chr3R 25802286 intergenic not near genes chr3R_7_25800001 chr3R_25800001 RAL-908 2323 chr3R 25832675 25832722 chr3R 25841877 25841894 roo 8 9193 2.5 4.0 3.2 1.9 9219 chr3R 25832675 exon alpha4GT2 + chr3R 25837284 intron alpha4GT2 + chr3R 25841894 exon alpha4GT2 + chr3R_8_25835001 chr3R_25835001 RAL-908 2324 chr3R 25843638 25843668 chr3R 25843773 25843818 9 148 3.0 6.5 4.8 1.6 180 chr3R 25843638 intergenic CR45653 + chr3R 25843728 intergenic CR45653 + chr3R 25843818 intergenic CR45653 + chr3R_9_25840001 chr3R_25840001 RAL-908 2325 chr3R 25900880 25900932 chr3R 25903577 25903629 12 2699 20.0 25.0 22.5 0.5 2749 chr3R 25900880 exon CG31091 + chr3R 25902254 intergenic CG31091 +,CG31089 + chr3R 25903629 exon,intron CG31089 +,CR43259 - chr3R_12_25900001 chr3R_25900001 RAL-908 2326 chr3R 25920831 25920879 chr3R 25920932 25920980 10 101 4.5 0.0 2.2 3.1 149 chr3R 25920831 exon CG42235 + chr3R 25920906 3` UTR CG42235 + chr3R 25920980 3` UTR CG42235 + chr3R_10_25920001 chr3R_25920001 RAL-908 2327 chr3R 25927494 25927519 chr3R 25927596 25927621 7 102 4.0 0.0 2.0 2.3 127 chr3R 25927494 intron CCAP-R - chr3R 25927558 intron CCAP-R - chr3R 25927621 intron CCAP-R - chr3R_7_25925001 chr3R_25925001 RAL-908 2328 chr3R 25952022 25952042 chr3R 25952150 25952202 6 153 0.5 1.0 0.8 3.3 180 chr3R 25952022 intron CCAP-R - chr3R 25952112 intron CCAP-R - chr3R 25952202 intron CCAP-R - chr3R_6_25950001 chr3R_25950001 RAL-908 2329 chr3R 26013832 26013856 chr3R 26013932 26013956 6 100 5.5 6.0 5.8 0.9 124 chr3R 26013832 intergenic not near genes chr3R 26013894 intergenic not near genes chr3R 26013956 intergenic not near genes chr3R_6_26010001 chr3R_26010001 RAL-908 2330 chr3R 26088564 26088608 chr3R 26088681 26088725 18 113 3.0 4.0 3.5 4.0 161 chr3R 26088564 intron dys - chr3R 26088644 intron dys - chr3R 26088725 intron dys - chr3R_18_26085001 chr3R_26085001 RAL-908 2331 chr3R 26093839 26093872 chr3R 26093937 26093970 9 97 1.0 5.0 3.0 2.2 131 chr3R 26093839 intron dys - chr3R 26093904 intron dys - chr3R 26093970 intron dys - chr3R_9_26090001 chr3R_26090001 RAL-908 2332 chr3R 26104074 26104115 chr3R 26105133 26105174 9 1062 27.0 28.0 27.5 0.3 1100 chr3R 26104074 intergenic not near genes chr3R 26104624 intergenic not near genes chr3R 26105174 intergenic not near genes chr3R_9_26100001 chr3R_26100001 RAL-908 2333 chr3R 26121928 26121976 chr3R 26122045 26122093 5 117 0.5 4.0 2.2 1.6 165 chr3R 26121928 intron CG31324 + chr3R 26122010 intron CG31324 + chr3R 26122093 intron CG31324 + chr3R_5_26120001 chr3R_26120001 RAL-908 2334 chr3R 26122446 26122471 chr3R 26122542 26122567 9 95 6.0 7.0 6.5 1.2 121 chr3R 26122446 intron CG31324 + chr3R 26122506 intron CG31324 + chr3R 26122567 intron CG31324 + chr3R_9_26120001 chr3R_26120001 RAL-908 2335 chr3R 26126533 26126566 chr3R 26126639 26126672 13 105 4.0 7.5 5.8 1.9 139 chr3R 26126533 intron CG31324 + chr3R 26126602 intron CG31324 + chr3R 26126672 intron,5` UTR CG31324 +,CG14556 + chr3R_13_26125001 chr3R_26125001 RAL-908 2336 chr3R 26143223 26143236 chr3R 26143475 26143488 7 251 5.0 7.5 6.2 1.0 265 chr3R 26143223 intergenic not near genes chr3R 26143356 intergenic not near genes chr3R 26143488 intergenic not near genes chr3R_7_26140001 chr3R_26140001 RAL-908 2337 chr3R 26235481 26235522 chr3R 26235567 26235624 10 99 1.0 1.0 1.0 5.0 143 chr3R 26235481 5` UTR CR42745 + chr3R 26235552 5` UTR CR42745 + chr3R 26235624 intron CR42745 + chr3R_10_26235001 chr3R_26235001 RAL-908 2338 chr3R 26255993 26256026 chr3R 26256094 26256127 14 100 11.0 2.0 6.5 1.9 134 chr3R 26255993 intron Ald - chr3R 26256060 intron Ald - chr3R 26256127 intron Ald - chr3R_14_26255001 chr3R_26255001 RAL-908 2339 chr3R 26294697 26294750 chr3R 26294795 26294848 11 97 3.0 1.0 2.0 3.7 151 chr3R 26294697 intergenic not near genes chr3R 26294772 intergenic not near genes chr3R 26294848 intergenic not near genes chr3R_11_26290001 chr3R_26290001 RAL-908 2340 chr3R 26310616 26310657 chr3R 26310724 26310765 7 106 3.5 4.0 3.8 1.5 149 chr3R 26310616 intergenic not near genes chr3R 26310690 intergenic not near genes chr3R 26310765 intergenic not near genes chr3R_7_26310001 chr3R_26310001 RAL-908 2341 chr3R 26343028 26343050 chr3R 26343555 26343586 5 532 4.0 5.5 4.8 0.9 558 chr3R 26343028 intron CG33970 + chr3R 26343307 intron CG33970 + chr3R 26343586 intron CG33970 + chr3R_5_26340001 chr3R_26340001 RAL-908 2342 chr3R 26376305 26376338 chr3R 26385485 26385518 roo 8 9177 5.5 0.0 2.8 2.1 9213 chr3R 26376305 intergenic not near genes chr3R 26380912 intergenic not near genes chr3R 26385518 intergenic not near genes chr3R_8_26380001 chr3R_26380001 RAL-908 2343 chr3R 26419614 26419658 chr3R 26419715 26419759 5 96 1.5 3.5 2.5 1.4 145 chr3R 26419614 intergenic not near genes chr3R 26419686 intergenic not near genes chr3R 26419759 intergenic not near genes chr3R_5_26415001 chr3R_26415001 RAL-908 2344 chr3R 26450499 26450545 chr3R 26450617 26450663 10 118 2.0 2.5 2.2 3.1 164 chr3R 26450499 exon Hex-t1 + chr3R 26450581 3` UTR Hex-t1 + chr3R 26450663 intergenic Hex-t2 +,Hex-t1 + chr3R_10_26450001 chr3R_26450001 RAL-908 2345 chr3R 26510503 26510524 chr3R 26519578 26519599 roo 7 9075 2.5 7.0 4.8 1.2 9096 chr3R 26510503 intron plum - chr3R 26515051 intron plum - chr3R 26519599 intron,5` UTR plum -,CR45226 + chr3R_7_26515001 chr3R_26515001 RAL-908 2346 chr3R 26553197 26553237 chr3R 26553714 26553761 14 523 1.5 2.0 1.8 5.0 564 chr3R 26553197 intron scrib + chr3R 26553479 intron scrib + chr3R 26553761 intron scrib + chr3R_14_26550001 chr3R_26550001 RAL-908 2347 chr3R 26558317 26558353 chr3R 26565645 26565685 Stalker4 7 7325 2.5 2.5 2.5 2.0 7368 chr3R 26558317 intron scrib + chr3R 26562001 intron scrib + chr3R 26565685 intron scrib + chr3R_7_26560001 chr3R_26560001 RAL-908 2348 chr3R 26607723 26607755 chr3R 26607819 26607851 13 96 3.0 4.0 3.5 2.9 128 chr3R 26607723 5` UTR CR44951 + chr3R 26607787 5` UTR CR44951 + chr3R 26607851 5` UTR CR44951 + chr3R_13_26605001 chr3R_26605001 RAL-908 2349 chr3R 26641616 26641656 chr3R 26641723 26641729 9 102 2.5 1.0 1.8 3.2 113 chr3R 26641616 intergenic not near genes chr3R 26641672 intergenic not near genes chr3R 26641729 intergenic not near genes chr3R_9_26640001 chr3R_26640001 RAL-908 2350 chr3R 26642740 26642746 chr3R 26643154 26643160 jockey 4 414 4.5 9.0 6.8 0.5 420 chr3R 26642740 intergenic not near genes chr3R 26642950 intergenic not near genes chr3R 26643160 intergenic not near genes chr3R_4_26640001 chr3R_26640001 RAL-908 2351 chr3R 26642748 26642762 chr3R 26643150 26643161 jockey 4 407 1.0 7.5 4.2 0.8 413 chr3R 26642748 intergenic not near genes chr3R 26642954 intergenic not near genes chr3R 26643161 intergenic not near genes chr3R_4_26640001 chr3R_26640001 RAL-908 2352 chr3R 26660630 26660661 chr3R 26660734 26660765 5 102 3.5 3.0 3.2 1.2 135 chr3R 26660630 intron beat-VII - chr3R 26660698 intron beat-VII - chr3R 26660765 intron beat-VII - chr3R_5_26660001 chr3R_26660001 RAL-908 2353 chr3R 26710809 26710856 chr3R 26710913 26710960 18 103 4.0 3.5 3.8 3.8 151 chr3R 26710809 intron amon - chr3R 26710884 intron amon - chr3R 26710960 intron amon - chr3R_18_26710001 chr3R_26710001 RAL-908 2354 chr3R 26770220 26770271 chr3R 26770317 26770368 12 95 2.5 2.5 2.5 3.4 148 chr3R 26770220 intergenic CR45563 + chr3R 26770294 intergenic CR45563 + chr3R 26770368 intergenic not near genes chr3R_12_26770001 chr3R_26770001 RAL-908 2355 chr3R 26789584 26789615 chr3R 26789681 26789694 7 94 0.5 0.0 0.2 5.8 110 chr3R 26789584 intergenic not near genes chr3R 26789639 intergenic not near genes chr3R 26789694 intergenic not near genes chr3R_7_26785001 chr3R_26785001 RAL-908 2356 chr3R 26810540 26810569 chr3R 26811045 26811074 roo 12 505 12.0 7.5 9.8 1.1 534 chr3R 26810540 intron Tl + chr3R 26810807 intron Tl + chr3R 26811074 intron Tl + chr3R_12_26810001 chr3R_26810001 RAL-908 2357 chr3R 27007386 27007432 chr3R 27016541 27016587 roo 16 9152 6.0 7.0 6.5 2.1 9201 chr3R 27007386 intron RYa-R + chr3R 27011986 intron RYa-R + chr3R 27016587 intron RYa-R + chr3R_16_27010001 chr3R_27010001 RAL-908 2358 chr3R 27027667 27027703 chr3R 27027771 27027803 4 102 2.5 2.0 2.2 1.2 136 chr3R 27027667 intron RYa-R + chr3R 27027735 intron RYa-R + chr3R 27027803 intron RYa-R + chr3R_4_27025001 chr3R_27025001 RAL-908 2359 chr3R 27091546 27091561 chr3R 27091645 27091660 7 99 3.0 0.0 1.5 2.8 114 chr3R 27091546 intergenic Cpr97Eb - chr3R 27091603 intergenic Cpr97Eb - chr3R 27091660 intergenic not near genes chr3R_7_27090001 chr3R_27090001 RAL-908 2360 chr3R 27140496 27140510 chr3R 27148126 27148140 412 5 7630 6.0 0.5 3.2 1.2 7644 chr3R 27140496 intron CG6051 - chr3R 27144318 intron CG6051 - chr3R 27148140 intron CG6051 - chr3R_5_27140001 chr3R_27140001 RAL-908 2361 chr3R 27197813 27197858 chr3R 27197911 27197954 12 96 1.5 3.5 2.5 3.4 141 chr3R 27197813 intergenic not near genes chr3R 27197884 intergenic not near genes chr3R 27197954 intergenic not near genes chr3R_12_27195001 chr3R_27195001 RAL-908 2362 chr3R 27292268 27292299 chr3R 27292400 27292409 4 124 2.0 1.5 1.8 1.4 141 chr3R 27292268 intergenic CG3348 - chr3R 27292338 intergenic CG3348 - chr3R 27292409 intergenic CG3348 - chr3R_4_27290001 chr3R_27290001 RAL-908 2363 chr3R 27329453 27329498 chr3R 27329550 27329595 6 95 5.0 4.0 4.5 1.1 142 chr3R 27329453 intergenic CG3330 - chr3R 27329524 intergenic CG3330 - chr3R 27329595 intergenic CG3330 - chr3R_6_27325001 chr3R_27325001 RAL-908 2364 chr3R 27342779 27342824 chr3R 27351380 27351425 Tirant 5 8601 5.5 5.0 5.2 0.8 8646 chr3R 27342779 intron CG42534 + chr3R 27347102 intron CG42534 + chr3R 27351425 intron CG42534 + chr3R_5_27345001 chr3R_27345001 RAL-908 2365 chr3R 27385680 27385712 chr3R 27385971 27385998 5 286 3.0 5.0 4.0 1.0 318 chr3R 27385680 intron side - chr3R 27385839 intron side - chr3R 27385998 intron side - chr3R_5_27385001 chr3R_27385001 RAL-908 2366 chr3R 27490918 27490966 chr3R 27491048 27491060 13 117 2.0 2.0 2.0 4.3 142 chr3R 27490918 intergenic not near genes chr3R 27490989 intergenic not near genes chr3R 27491060 intergenic not near genes chr3R_13_27490001 chr3R_27490001 RAL-908 2367 chr3R 27496571 27496601 chr3R 27496696 27496726 8 124 7.0 3.0 5.0 1.3 155 chr3R 27496571 intergenic not near genes chr3R 27496648 intergenic not near genes chr3R 27496726 intergenic not near genes chr3R_8_27495001 chr3R_27495001 RAL-908 2368 chr3R 27521138 27521152 chr3R 27530366 27530381 roo 6 9227 5.5 0.0 2.8 1.6 9243 chr3R 27521138 intron CG12885 + chr3R 27525760 intron CG12885 + chr3R 27530381 intron CG12885 + chr3R_6_27525001 chr3R_27525001 RAL-908 2369 chr3R 27595033 27595084 chr3R 27595136 27595181 18 102 3.5 4.0 3.8 3.8 148 chr3R 27595033 intron CG5639 - chr3R 27595107 intron CG5639 - chr3R 27595181 intron CG5639 - chr3R_18_27595001 chr3R_27595001 RAL-908 2370 chr3R 27619685 27619727 chr3R 27619817 27619862 7 132 2.5 1.0 1.8 2.5 177 chr3R 27619685 intron Tusp + chr3R 27619774 intron Tusp + chr3R 27619862 intron Tusp + chr3R_7_27615001 chr3R_27615001 RAL-908 2371 chr3R 27622218 27622256 chr3R 27622333 27622365 7 109 4.0 3.0 3.5 1.6 147 chr3R 27622218 intron Tusp + chr3R 27622292 intron Tusp + chr3R 27622365 intron Tusp + chr3R_7_27620001 chr3R_27620001 RAL-908 2372 chr3R 27627069 27627115 chr3R 27627191 27627218 8 120 2.5 1.0 1.8 2.9 149 chr3R 27627069 intron Tusp + chr3R 27627144 intron Tusp + chr3R 27627218 intron Tusp + chr3R_8_27625001 chr3R_27625001 RAL-908 2373 chr3R 27706756 27706806 chr3R 27706853 27706886 12 95 2.5 3.0 2.8 3.2 130 chr3R 27706756 intergenic CG12428 -,CG12877 + chr3R 27706821 intergenic CG12428 -,CG12877 + chr3R 27706886 intergenic CG12428 -,CG12877 + chr3R_12_27705001 chr3R_27705001 RAL-908 2374 chr3R 27725548 27725587 chr3R 27731010 27731049 I-element 9 5462 5.5 5.5 5.5 1.4 5501 chr3R 27725548 intergenic not near genes chr3R 27728298 intergenic not near genes chr3R 27731049 intergenic not near genes chr3R_9_27725001 chr3R_27725001 RAL-908 2375 chr3R 27799918 27799962 chr3R 27800019 27800063 8 100 3.0 3.0 3.0 2.0 145 chr3R 27799918 intron CG34353 - chr3R 27799990 intron CG34353 - chr3R 27800063 intron CG34353 - chr3R_8_27795001 chr3R_27795001 RAL-908 2376 chr3R 27856741 27856786 chr3R 27858244 27858289 hopper2 6 1498 7.0 6.0 6.5 0.8 1548 chr3R 27856741 intron CG34353 - chr3R 27857515 intron CG34353 - chr3R 27858289 intron CG34353 - chr3R_6_27855001 chr3R_27855001 RAL-908 2377 chr3R 27862934 27862973 chr3R 27868259 27868298 Transpac 7 5320 4.0 4.5 4.2 1.3 5364 chr3R 27862934 intron CG34353 - chr3R 27865616 intron CG34353 - chr3R 27868298 intron CG34353 - chr3R_7_27865001 chr3R_27865001 RAL-908 2378 chr3R 27875679 27875730 chr3R 27882754 27882805 297 10 7075 2.5 5.5 4.0 2.0 7126 chr3R 27875679 intron CG34353 - chr3R 27879242 intron CG34353 - chr3R 27882805 intron CG34353 - chr3R_10_27875001 chr3R_27875001 RAL-908 2379 chr3R 27900311 27900368 chr3R 27900413 27900434 15 99 2.0 3.5 2.8 3.9 123 chr3R 27900311 intron CG34353 - chr3R 27900372 intron CG34353 - chr3R 27900434 intron CG34353 - chr3R_15_27900001 chr3R_27900001 RAL-908 2380 chr3R 28005748 28005789 chr3R 28005850 28005870 6 98 3.5 2.5 3.0 1.5 122 chr3R 28005748 intergenic not near genes chr3R 28005809 intergenic not near genes chr3R 28005870 intergenic not near genes chr3R_6_28005001 chr3R_28005001 RAL-908 2381 chr3R 28068479 28068521 chr3R 28073941 28073983 I-element 8 5460 0.0 3.5 1.8 2.9 5504 chr3R 28068479 intron CG34362 + chr3R 28071231 intron CG34362 + chr3R 28073983 intron CG34362 + chr3R_8_28070001 chr3R_28070001 RAL-908 2382 chr3R 28102552 28102603 chr3R 28102810 28102861 6 256 2.0 4.5 3.2 1.4 309 chr3R 28102552 intergenic not near genes chr3R 28102706 intergenic not near genes chr3R 28102861 intergenic not near genes chr3R_6_28100001 chr3R_28100001 RAL-908 2383 chr3R 28103307 28103333 chr3R 28103420 28103446 4 113 0.5 5.0 2.8 1.1 139 chr3R 28103307 intergenic not near genes chr3R 28103376 intergenic not near genes chr3R 28103446 intergenic not near genes chr3R_4_28100001 chr3R_28100001 RAL-908 2384 chr3R 28118551 28118850 chr3R 28118703 28118951 14 132 7.5 3.5 5.5 2.2 400 chr3R 28118551 intergenic not near genes chr3R 28118751 intergenic not near genes chr3R 28118951 intergenic not near genes chr3R_14_28115001 chr3R_28115001 RAL-908 2385 chr3R 28118861 28118876 chr3R 28118951 28118976 9 98 3.0 7.5 5.2 1.5 115 chr3R 28118861 intergenic not near genes chr3R 28118918 intergenic not near genes chr3R 28118976 intergenic not near genes chr3R_9_28115001 chr3R_28115001 RAL-908 2386 chr3R 28130052 28130099 chr3R 28130186 28130233 7 130 1.5 4.0 2.8 1.8 181 chr3R 28130052 intergenic not near genes chr3R 28130142 intergenic not near genes chr3R 28130233 intergenic not near genes chr3R_7_28130001 chr3R_28130001 RAL-908 2387 chr3R 28169831 28169867 chr3R 28170037 28170073 9 204 2.5 4.5 3.5 2.0 242 chr3R 28169831 intron CG34354 + chr3R 28169952 intron CG34354 + chr3R 28170073 intron CG34354 + chr3R_9_28165001 chr3R_28165001 RAL-908 2388 chr3R 28173658 28173703 chr3R 28181102 28181153 mdg1 12 7449 3.5 1.5 2.5 3.4 7495 chr3R 28173658 intron CG34354 + chr3R 28177406 intron CG34354 + chr3R 28181153 intron CG34354 + chr3R_12_28175001 chr3R_28175001 RAL-908 2389 chr3R 28201836 28201841 chr3R 28201928 28201955 4 108 1.0 1.5 1.2 1.8 119 chr3R 28201836 intron CG34354 + chr3R 28201896 intron CG34354 + chr3R 28201955 intron CG34354 + chr3R_4_28200001 chr3R_28200001 RAL-908 2390 chr3R 28253327 28253360 chr3R 28255855 28255885 jockey 7 2527 2.5 2.5 2.5 2.0 2558 chr3R 28253327 intergenic not near genes chr3R 28254606 intergenic not near genes chr3R 28255885 intergenic not near genes chr3R_7_28250001 chr3R_28250001 RAL-908 2391 chr3R 28282979 28283018 chr3R 28283628 28283667 5 649 4.0 5.0 4.5 0.9 688 chr3R 28282979 exon CG34436 + chr3R 28283323 exon CG34436 + chr3R 28283667 intergenic CG34437 +,CG34436 + chr3R_5_28280001 chr3R_28280001 RAL-908 2392 chr3R 28300143 28300195 chr3R 28300249 28300301 13 105 3.5 4.0 3.8 2.7 158 chr3R 28300143 intergenic not near genes chr3R 28300222 intergenic not near genes chr3R 28300301 intergenic not near genes chr3R_13_28300001 chr3R_28300001 RAL-908 2393 chr3R 28305289 28305338 chr3R 28306481 28306521 9 1191 3.0 4.5 3.8 1.9 1232 chr3R 28305289 intergenic not near genes chr3R 28305905 intergenic not near genes chr3R 28306521 intergenic not near genes chr3R_9_28305001 chr3R_28305001 RAL-908 2394 chr3R 28327343 28327396 chr3R 28327737 28327788 21 392 4.5 3.5 4.0 4.2 445 chr3R 28327343 intron larp - chr3R 28327566 intron larp - chr3R 28327788 intron larp - chr3R_21_28325001 chr3R_28325001 RAL-908 2395 chr3R 28407699 28407716 chr3R 28407805 28407822 6 106 5.5 5.0 5.2 1.0 123 chr3R 28407699 intergenic not near genes chr3R 28407760 intergenic not near genes chr3R 28407822 intergenic not near genes chr3R_6_28405001 chr3R_28405001 RAL-908 2396 chr3R 28460084 28460094 chr3R 28460413 28460423 5 332 6.0 1.0 3.5 1.1 339 chr3R 28460084 intron beat-VI + chr3R 28460254 intron beat-VI + chr3R 28460423 intron beat-VI + chr3R_5_28460001 chr3R_28460001 RAL-908 2397 chr3R 28594084 28594096 chr3R 28594183 28594195 4 98 7.5 6.0 6.8 0.5 111 chr3R 28594084 5` UTR CR43440 + chr3R 28594140 5` UTR CR43440 + chr3R 28594195 5` UTR CR43440 + chr3R_4_28590001 chr3R_28590001 RAL-908 2398 chr3R 28594099 28594131 chr3R 28594178 28594230 7 96 1.5 5.5 3.5 1.6 131 chr3R 28594099 5` UTR CR43440 + chr3R 28594164 5` UTR CR43440 + chr3R 28594230 5` UTR CR43440 + chr3R_7_28590001 chr3R_28590001 RAL-908 2399 chr3R 28626229 28626246 chr3R 28626329 28626358 5 104 2.0 3.5 2.8 1.3 129 chr3R 28626229 intron CG10011 - chr3R 28626294 intron CG10011 - chr3R 28626358 intron CG10011 - chr3R_5_28625001 chr3R_28625001 RAL-908 2400 chr3R 28640312 28640364 chr3R 28640415 28640461 12 101 0.5 2.5 1.5 4.8 149 chr3R 28640312 intergenic not near genes chr3R 28640386 intergenic not near genes chr3R 28640461 intergenic not near genes chr3R_12_28640001 chr3R_28640001 RAL-908 2401 chr3R 28758305 28758319 chr3R 28771332 28771346 Stalker4 6 13027 4.5 0.0 2.2 1.9 13041 chr3R 28758305 intergenic aqrs - chr3R 28764826 intergenic not near genes chr3R 28771346 intergenic not near genes chr3R_6_28760001 chr3R_28760001 RAL-908 2402 chr3R 28792854 28792883 chr3R 28797969 28797987 jockey 7 5107 3.0 3.5 3.2 1.7 5133 chr3R 28792854 intergenic not near genes chr3R 28795420 intergenic not near genes chr3R 28797987 intergenic not near genes chr3R_7_28795001 chr3R_28795001 RAL-908 2403 chr3R 28811550 28811601 chr3R 28811716 28811767 22 166 5.0 6.0 5.5 3.4 217 chr3R 28811550 intergenic wdn - chr3R 28811658 intergenic wdn -,CG1646 + chr3R 28811767 intergenic CG1646 +,wdn - chr3R_22_28810001 chr3R_28810001 RAL-908 2404 chr3R 21907534 21907536 chr3R 28831799 28831802 101 6924266 20.5 17.0 18.8 5.1 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_101_25365001 chr3R_25365001 RAL-908 2405 chr3R 28888756 28888775 chr3R 28888868 28888888 5 110 7.5 5.5 6.5 0.7 132 chr3R 28888756 intron Doa + chr3R 28888822 intron Doa + chr3R 28888888 intron Doa + chr3R_5_28885001 chr3R_28885001 RAL-908 2406 chr3R 28935588 28935634 chr3R 28935696 28935742 8 106 3.0 0.5 1.8 2.9 154 chr3R 28935588 intron CG14521 - chr3R 28935665 intron CG14521 - chr3R 28935742 intron CG14521 - chr3R_8_28935001 chr3R_28935001 RAL-908 2407 chr3R 28971144 28971186 chr3R 28971245 28971287 14 99 4.0 4.0 4.0 2.8 143 chr3R 28971144 5` UTR CR45669 + chr3R 28971216 5` UTR CR45669 + chr3R 28971287 5` UTR CR45669 + chr3R_14_28970001 chr3R_28970001 RAL-908 2408 chr3R 29009936 29009985 chr3R 29010062 29010111 7 123 6.0 7.0 6.5 0.9 175 chr3R 29009936 intron wat - chr3R 29010024 intron wat - chr3R 29010111 intron wat - chr3R_7_29010001 chr3R_29010001 RAL-908 2409 chr3R 21907534 21907534 chr3R 29013340 29013340 6 7105806 20.5 12.0 16.2 0.3 7105806 chr3R 21907534 intergenic CG6678 + chr3R 25460437 intron Fur1 - chr3R 29013340 intron wat - chr3R_6_25460001 chr3R_25460001 RAL-908 2410 chr3R 29067594 29067638 chr3R 29067759 29067804 8 166 2.5 0.0 1.2 3.6 210 chr3R 29067594 intron CG11873 + chr3R 29067699 intron CG11873 + chr3R 29067804 intron CG11873 + chr3R_8_29065001 chr3R_29065001 RAL-908 2411 chr3R 29070037 29070079 chr3R 29070138 29070180 13 101 3.0 6.0 4.5 2.4 143 chr3R 29070037 intron CG11873 + chr3R 29070108 intron CG11873 + chr3R 29070180 intron CG11873 + chr3R_13_29070001 chr3R_29070001 RAL-908 2412 chr3R 29079367 29079404 chr3R 29080759 29080785 NOF 5 1390 4.5 5.0 4.8 0.9 1418 chr3R 29079367 intron CG11873 + chr3R 29080076 intron CG11873 + chr3R 29080785 intron CG11873 + chr3R_5_29080001 chr3R_29080001 RAL-908 2413 chr3R 29176116 29176124 chr3R 29176220 29176232 6 106 9.0 1.5 5.2 1.0 116 chr3R 29176116 intron CG14509 - chr3R 29176174 intron CG14509 - chr3R 29176232 intron CG14509 - chr3R_6_29175001 chr3R_29175001 RAL-908 2414 chr3R 29195957 29195995 chr3R 29196056 29196094 14 98 4.5 1.0 2.8 3.7 137 chr3R 29195957 intergenic not near genes chr3R 29196026 intergenic not near genes chr3R 29196094 intergenic not near genes chr3R_14_29195001 chr3R_29195001 RAL-908 2415 chr3R 29203830 29203851 chr3R 29203930 29203951 4 100 2.0 0.0 1.0 2.0 121 chr3R 29203830 5` UTR CG14508 - chr3R 29203890 intron CG14508 - chr3R 29203951 intron CG14508 - chr3R_4_29200001 chr3R_29200001 RAL-908 2416 chr3R 29213041 29213077 chr3R 29213144 29213180 6 103 7.0 3.0 5.0 1.0 139 chr3R 29213041 intergenic not near genes chr3R 29213110 intergenic not near genes chr3R 29213180 intergenic not near genes chr3R_6_29210001 chr3R_29210001 RAL-908 2417 chr3R 29237240 29237279 chr3R 29239266 29239311 9 2033 13.0 3.0 8.0 1.0 2071 chr3R 29237240 exon CG11951 - chr3R 29238276 intron CG11951 - chr3R 29239311 exon CG31427 - chr3R_9_29235001 chr3R_29235001 RAL-908 2418 chr3R 29319808 29319857 chr3R 29320147 29320183 jockey 14 338 7.0 6.5 6.8 1.8 375 chr3R 29319808 intergenic Cnx99A - chr3R 29319996 intergenic Cnx99A - chr3R 29320183 intergenic not near genes chr3R_14_29315001 chr3R_29315001 RAL-908 2419 chr3R 29332337 29332381 chr3R 29332445 29332481 5 101 0.5 4.5 2.5 1.4 144 chr3R 29332337 intergenic not near genes chr3R 29332409 intergenic not near genes chr3R 29332481 intergenic not near genes chr3R_5_29330001 chr3R_29330001 RAL-908 2420 chr3R 29356026 29356082 chr3R 29356126 29356183 10 100 3.0 1.5 2.2 3.1 157 chr3R 29356026 intergenic CR45547 - chr3R 29356104 intergenic CR45547 - chr3R 29356183 3` UTR CR45547 - chr3R_10_29355001 chr3R_29355001 RAL-908 2421 chr3R 29406602 29406643 chr3R 29407908 29407949 jockey 9 1304 4.0 3.0 3.5 2.0 1347 chr3R 29406602 intron Ptp99A + chr3R 29407276 intron Ptp99A + chr3R 29407949 intron Ptp99A + chr3R_9_29405001 chr3R_29405001 RAL-908 2422 chr3R 29449343 29449355 chr3R 29449441 29449453 6 98 11.0 5.0 8.0 0.7 110 chr3R 29449343 intron Ptp99A + chr3R 29449398 intron Ptp99A + chr3R 29449453 intron Ptp99A + chr3R_6_29445001 chr3R_29445001 RAL-908 2423 chr3R 29449364 29449382 chr3R 29449436 29449480 4 92 6.0 5.0 5.5 0.6 116 chr3R 29449364 intron Ptp99A + chr3R 29449422 intron Ptp99A + chr3R 29449480 intron Ptp99A + chr3R_4_29445001 chr3R_29445001 RAL-908 2424 chr3R 29472007 29472036 chr3R 29472120 29472148 7 111 2.0 5.0 3.5 1.6 141 chr3R 29472007 intron Ptp99A + chr3R 29472078 intron Ptp99A + chr3R 29472148 intron Ptp99A + chr3R_7_29470001 chr3R_29470001 RAL-908 2425 chr3R 29474413 29474442 chr3R 29474520 29474549 9 107 4.5 5.0 4.8 1.6 136 chr3R 29474413 intron Ptp99A + chr3R 29474481 intron Ptp99A + chr3R 29474549 intron Ptp99A + chr3R_9_29470001 chr3R_29470001 RAL-908 2426 chr3R 29505873 29505926 chr3R 29505970 29506023 9 93 0.0 3.0 1.5 3.6 150 chr3R 29505873 intergenic not near genes chr3R 29505948 intergenic not near genes chr3R 29506023 intergenic not near genes chr3R_9_29505001 chr3R_29505001 RAL-908 2427 chr3R 29575832 29575838 chr3R 29575935 29575941 4 103 6.0 0.0 3.0 1.0 109 chr3R 29575832 intergenic not near genes chr3R 29575886 intergenic not near genes chr3R 29575941 intergenic not near genes chr3R_4_29575001 chr3R_29575001 RAL-908 2428 chr3R 29581535 29581566 chr3R 29581636 29581658 9 100 2.5 1.0 1.8 3.2 123 chr3R 29581535 intergenic not near genes chr3R 29581596 intergenic not near genes chr3R 29581658 intergenic not near genes chr3R_9_29580001 chr3R_29580001 RAL-908 2429 chr3R 29590378 29590397 chr3R 29590486 29590510 5 112 2.5 2.5 2.5 1.4 132 chr3R 29590378 intron CG31041 - chr3R 29590444 intron CG31041 - chr3R 29590510 exon CG31041 - chr3R_5_29590001 chr3R_29590001 RAL-908 2430 chr3R 29655630 29655672 chr3R 29655729 29655771 8 99 4.0 0.5 2.2 2.5 141 chr3R 29655630 intron Dop1R2 - chr3R 29655700 intron Dop1R2 - chr3R 29655771 intron Dop1R2 - chr3R_8_29655001 chr3R_29655001 RAL-908 2431 chr3R 29689934 29689956 chr3R 29690014 29690055 10 97 2.0 3.5 2.8 2.6 121 chr3R 29689934 intergenic not near genes chr3R 29689994 intergenic not near genes chr3R 29690055 intergenic not near genes chr3R_10_29685001 chr3R_29685001 RAL-908 2432 chr3R 29702129 29702166 chr3R 29702231 29702270 6 103 2.0 0.0 1.0 3.0 141 chr3R 29702129 intergenic not near genes chr3R 29702200 intergenic not near genes chr3R 29702270 intergenic not near genes chr3R_6_29700001 chr3R_29700001 RAL-908 2433 chr3R 29718131 29718168 chr3R 29718227 29718264 11 95 5.0 3.5 4.2 2.1 133 chr3R 29718131 intergenic not near genes chr3R 29718198 intergenic CG15506 + chr3R 29718264 intergenic CG15506 + chr3R_11_29715001 chr3R_29715001 RAL-908 2434 chr3R 29738250 29738295 chr3R 29739737 29739782 hobo 16 1486 4.0 5.5 4.8 2.8 1532 chr3R 29738250 intergenic CG1969 +,CG7598 + chr3R 29739016 intron CG1969 + chr3R 29739782 5` UTR CG1969 + chr3R_16_29735001 chr3R_29735001 RAL-908 2435 chr3R 29754946 29754989 chr3R 29755044 29755086 4 96 0.5 2.0 1.2 1.8 140 chr3R 29754946 intergenic CR44953 -,yata + chr3R 29755016 intergenic CR44953 -,yata + chr3R 29755086 intergenic CR44953 - chr3R_4_29755001 chr3R_29755001 RAL-908 2436 chr3R 29760340 29760391 chr3R 29761561 29761612 pogo 13 1220 5.0 5.5 5.2 2.1 1272 chr3R 29760340 intergenic not near genes chr3R 29760976 intergenic not near genes chr3R 29761612 intergenic not near genes chr3R_13_29760001 chr3R_29760001 RAL-908 2437 chr3R 29880565 29880578 chr3R 29880670 29880683 4 104 3.0 3.0 3.0 1.0 118 chr3R 29880565 intron CG31038 + chr3R 29880624 intron CG31038 + chr3R 29880683 intron CG31038 + chr3R_4_29880001 chr3R_29880001 RAL-908 2438 chr3R 29880586 29880618 chr3R 29880667 29880703 11 98 2.0 3.0 2.5 3.1 117 chr3R 29880586 intron CG31038 + chr3R 29880644 intron CG31038 + chr3R 29880703 intron CG31038 + chr3R_11_29880001 chr3R_29880001 RAL-908 2439 chr3R 29882004 29882050 chr3R 29891181 29891227 roo 13 9176 4.5 5.0 4.8 2.2 9223 chr3R 29882004 intron CG31038 + chr3R 29886616 intron CG31038 + chr3R 29891227 intron CG31038 + chr3R_13_29885001 chr3R_29885001 RAL-908 2440 chr3R 30013656 30013701 chr3R 30013759 30013804 10 102 3.5 5.0 4.2 1.9 148 chr3R 30013656 intron CG7920 - chr3R 30013730 intron CG7920 - chr3R 30013804 intron CG7920 - chr3R_10_30010001 chr3R_30010001 RAL-908 2441 chr3R 30051285 30051306 chr3R 30051384 30051390 8 97 1.5 1.5 1.5 3.2 105 chr3R 30051285 intron,intron CG15528 -,CR44046 + chr3R 30051338 intron,intron CG15528 -,CR44046 + chr3R 30051390 intron,intron CG15528 -,CR44046 + chr3R_8_30050001 chr3R_30050001 RAL-908 2442 chr3R 30084831 30084865 chr3R 30086318 30086331 hobo 12 1480 2.0 4.5 3.2 2.9 1500 chr3R 30084831 intron sima + chr3R 30085581 intron sima + chr3R 30086331 intron sima + chr3R_12_30085001 chr3R_30085001 RAL-908 2443 chr3R 30181337 30181371 chr3R 30181443 30181486 10 109 4.5 0.0 2.2 3.1 149 chr3R 30181337 3` UTR Bet5 + chr3R 30181412 3` UTR Bet5 + chr3R 30181486 3` UTR Bet5 + chr3R_10_30180001 chr3R_30180001 RAL-908 2444 chr3R 30224629 30224671 chr3R 30224727 30224749 11 96 5.0 1.5 3.2 2.6 120 chr3R 30224629 intergenic not near genes chr3R 30224689 intergenic not near genes chr3R 30224749 intergenic not near genes chr3R_11_30220001 chr3R_30220001 RAL-908 2445 chr3R 30238742 30238796 chr3R 30239926 30239980 1360 16 1184 3.5 4.5 4.0 3.2 1238 chr3R 30238742 intergenic not near genes chr3R 30239361 intergenic not near genes chr3R 30239980 intergenic not near genes chr3R_16_30235001 chr3R_30235001 RAL-908 2446 chr3R 30246320 30246335 chr3R 30246419 30246429 7 98 0.0 3.0 1.5 2.8 109 chr3R 30246320 intron CG9733 - chr3R 30246374 intron CG9733 - chr3R 30246429 intron CG9733 - chr3R_7_30245001 chr3R_30245001 RAL-908 2447 chr3R 30262557 30262591 chr3R 30262674 30262708 9 116 0.5 2.0 1.2 4.1 151 chr3R 30262557 intergenic not near genes chr3R 30262632 intergenic not near genes chr3R 30262708 intergenic not near genes chr3R_9_30260001 chr3R_30260001 RAL-908 2448 chr3R 30317304 30317354 chr3R 30324915 30324966 roo 4 7611 2.0 4.0 3.0 1.0 7662 chr3R 30317304 intron hdc + chr3R 30321135 intron hdc + chr3R 30324966 intron hdc + chr3R_4_30320001 chr3R_30320001 RAL-908 2449 chr3R 30330480 30330520 chr3R 30330579 30330620 5 95 2.5 5.0 3.8 1.0 140 chr3R 30330480 intron hdc + chr3R 30330550 intron hdc + chr3R 30330620 intron hdc + chr3R_5_30330001 chr3R_30330001 RAL-908 2450 chr3R 30364828 30364864 chr3R 30365021 30365057 5 189 3.0 5.0 4.0 1.0 229 chr3R 30364828 3` UTR hdc + chr3R 30364942 3` UTR hdc + chr3R 30365057 3` UTR hdc + chr3R_5_30360001 chr3R_30360001 RAL-908 2451 chr3R 30375522 30375564 chr3R 30383167 30383209 412 13 7643 4.5 4.0 4.2 2.5 7687 chr3R 30375522 intergenic not near genes chr3R 30379366 intergenic not near genes chr3R 30383209 intergenic not near genes chr3R_13_30375001 chr3R_30375001 RAL-908 2452 chr3R 30396197 30396242 chr3R 30404483 30404528 roo 7 8286 7.0 4.0 5.5 1.1 8331 chr3R 30396197 intergenic not near genes chr3R 30400362 intergenic not near genes chr3R 30404528 5` UTR CR45570 + chr3R_7_30400001 chr3R_30400001 RAL-908 2453 chr3R 30440671 30440715 chr3R 30440950 30440994 14 278 3.0 3.0 3.0 3.5 323 chr3R 30440671 intron CG15537 - chr3R 30440832 intron CG15537 - chr3R 30440994 intron CG15537 - chr3R_14_30440001 chr3R_30440001 RAL-908 2454 chr3R 30456371 30456420 chr3R 30456471 30456520 16 100 5.5 3.0 4.2 3.1 149 chr3R 30456371 intergenic CG2224 - chr3R 30456446 3` UTR CG2224 - chr3R 30456520 3` UTR CG2224 - chr3R_16_30455001 chr3R_30455001 RAL-908 2455 chr3R 30457998 30458047 chr3R 30458098 30458146 14 98 5.0 2.5 3.8 2.9 148 chr3R 30457998 intron CG2224 - chr3R 30458072 intron CG2224 - chr3R 30458146 intron CG2224 - chr3R_14_30455001 chr3R_30455001 RAL-908 2456 chr3R 30471887 30471927 chr3R 30471981 30472023 19 96 5.5 4.5 5.0 3.2 136 chr3R 30471887 intron PH4alphaEFB + chr3R 30471955 intron PH4alphaEFB + chr3R 30472023 intron PH4alphaEFB + chr3R_19_30470001 chr3R_30470001 RAL-908 2457 chr3R 30480459 30480508 chr3R 30482947 30482996 jockey 10 2488 1.5 5.5 3.5 2.2 2537 chr3R 30480459 intron PH4alphaEFB + chr3R 30481728 intron PH4alphaEFB + chr3R 30482996 intron PH4alphaEFB + chr3R_10_30480001 chr3R_30480001 RAL-908 2458 chr3R 30488102 30488120 chr3R 30488201 30488219 8 99 4.5 0.5 2.5 2.3 117 chr3R 30488102 intergenic Jon99Fii - chr3R 30488160 intergenic Jon99Fii - chr3R 30488219 intergenic Jon99Fii - chr3R_8_30485001 chr3R_30485001 RAL-908 2459 chr3R 30498399 30498434 chr3R 30498619 30498654 11 220 0.0 5.5 2.8 2.9 255 chr3R 30498399 intron PH4alphaNE1 - chr3R 30498526 intron PH4alphaNE1 - chr3R 30498654 intron PH4alphaNE1 - chr3R_11_30495001 chr3R_30495001 RAL-908 2460 chr3R 30517133 30517164 chr3R 30517242 30517247 4 102 6.0 4.5 5.2 0.6 114 chr3R 30517133 3` UTR jdp - chr3R 30517190 3` UTR jdp - chr3R 30517247 3` UTR jdp - chr3R_4_30515001 chr3R_30515001 RAL-908 2461 chr3R 30551248 30551296 chr3R 30551352 30551400 6 102 3.5 1.0 2.2 1.9 152 chr3R 30551248 intron tmod + chr3R 30551324 intron tmod + chr3R 30551400 intron tmod + chr3R_6_30550001 chr3R_30550001 RAL-908 2462 chr3R 30592492 30592530 chr3R 30592622 30592660 8 129 3.0 3.5 3.2 1.9 168 chr3R 30592492 intergenic CG2246 - chr3R 30592576 intergenic CG2246 - chr3R 30592660 intergenic CG2246 - chr3R_8_30590001 chr3R_30590001 RAL-908 2463 chr3R 30627588 30627637 chr3R 30627688 30627704 8 95 1.0 2.0 1.5 3.2 116 chr3R 30627588 3` UTR CG2267 - chr3R 30627646 exon CG2267 - chr3R 30627704 exon CG2267 - chr3R_8_30625001 chr3R_30625001 RAL-908 2464 chr3R 30690146 30690192 chr3R 30690250 30690290 8 103 3.0 3.5 3.2 1.9 144 chr3R 30690146 intergenic Spn100A + chr3R 30690218 intergenic Spn100A + chr3R 30690290 intergenic Spn100A + chr3R_8_30690001 chr3R_30690001 RAL-908 2465 chr3R 30700862 30700873 chr3R 30700994 30701016 5 141 4.0 0.0 2.0 1.7 154 chr3R 30700862 intergenic not near genes chr3R 30700939 intergenic not near genes chr3R 30701016 intergenic not near genes chr3R_5_30700001 chr3R_30700001 RAL-908 2466 chr3R 30859387 30859427 chr3R 30859485 30859525 17 98 3.5 2.0 2.8 4.5 138 chr3R 30859387 intergenic not near genes chr3R 30859456 intergenic not near genes chr3R 30859525 intergenic not near genes chr3R_17_30855001 chr3R_30855001 RAL-908 2467 chr3R 30900517 30900564 chr3R 30901672 30901719 13 1155 2.0 3.0 2.5 3.7 1202 chr3R 30900517 exon Cyp4c3 + chr3R 30901118 intron CG33483 - chr3R 30901719 intron CG33483 - chr3R_13_30900001 chr3R_30900001 RAL-908 2468 chr3R 30985672 30985715 chr3R 30985777 30985820 14 105 2.5 4.0 3.2 3.3 148 chr3R 30985672 intron 5-HT7 - chr3R 30985746 intron 5-HT7 - chr3R 30985820 intron 5-HT7 - chr3R_14_30985001 chr3R_30985001 RAL-908 2469 chr3R 31042100 31042142 chr3R 31042207 31042249 8 106 3.0 4.0 3.5 1.8 149 chr3R 31042100 intron CanA1 + chr3R 31042174 intron CanA1 + chr3R 31042249 intron CanA1 + chr3R_8_31040001 chr3R_31040001 RAL-908 2470 chr3R 31055498 31055519 chr3R 31055623 31055644 4 123 7.0 4.5 5.8 0.6 146 chr3R 31055498 3` UTR dco - chr3R 31055571 3` UTR dco - chr3R 31055644 3` UTR dco - chr3R_4_31055001 chr3R_31055001 RAL-908 2471 chr3R 31067029 31067058 chr3R 31067149 31067205 7 138 1.5 3.0 2.2 2.2 176 chr3R 31067029 intron Sox100B + chr3R 31067117 intron Sox100B + chr3R 31067205 intron Sox100B + chr3R_7_31065001 chr3R_31065001 RAL-908 2472 chr3R 31074210 31074245 chr3R 31081828 31081838 springer 8 7615 4.0 3.0 3.5 1.8 7628 chr3R 31074210 intron Sox100B + chr3R 31078024 intron Sox100B + chr3R 31081838 intron Sox100B + chr3R_8_31075001 chr3R_31075001 RAL-908 2473 chr3R 31146735 31146782 chr3R 31146833 31146880 12 98 3.5 4.5 4.0 2.4 145 chr3R 31146735 intron Gycbeta100B + chr3R 31146808 intron Gycbeta100B + chr3R 31146880 intron Gycbeta100B + chr3R_12_31145001 chr3R_31145001 RAL-908 2474 chr3R 31274343 31274395 chr3R 31274441 31274493 12 96 1.5 3.0 2.2 3.8 150 chr3R 31274343 intergenic not near genes chr3R 31274418 intergenic not near genes chr3R 31274493 intergenic not near genes chr3R_12_31270001 chr3R_31270001 RAL-908 2475 chr3R 31279355 31279383 chr3R 31285566 31285594 diver 9 6208 6.5 4.5 5.5 1.4 6239 chr3R 31279355 intergenic not near genes chr3R 31282474 intergenic not near genes chr3R 31285594 intergenic not near genes chr3R_9_31280001 chr3R_31280001 RAL-908 2476 chr3R 31279390 31279404 chr3R 31285564 31285615 diver 5 6203 3.5 4.5 4.0 1.0 6225 chr3R 31279390 intergenic not near genes chr3R 31282502 intergenic not near genes chr3R 31285615 intergenic not near genes chr3R_5_31280001 chr3R_31280001 RAL-908 2477 chr3R 31348039 31348090 chr3R 31348136 31348187 18 97 4.0 4.5 4.2 3.5 148 chr3R 31348039 intron CG34347 + chr3R 31348113 intron CG34347 + chr3R 31348187 intron CG34347 + chr3R_18_31345001 chr3R_31345001 RAL-908 2478 chr3R 31412689 31412742 chr3R 31412802 31412855 14 111 1.0 2.0 1.5 5.6 166 chr3R 31412689 intron Gprk2 + chr3R 31412772 intron Gprk2 + chr3R 31412855 intron Gprk2 + chr3R_14_31410001 chr3R_31410001 RAL-908 2479 chr3R 31413075 31413078 chr3R 31418295 31418298 copia 4 5220 6.0 0.0 3.0 1.0 5223 chr3R 31413075 intron Gprk2 + chr3R 31415686 intron Gprk2 + chr3R 31418298 intron Gprk2 + chr3R_4_31415001 chr3R_31415001 RAL-908 2480 chr3R 31413086 31413115 chr3R 31418292 31418315 copia 5 5211 2.5 0.0 1.2 2.3 5229 chr3R 31413086 intron Gprk2 + chr3R 31415700 intron Gprk2 + chr3R 31418315 intron Gprk2 + chr3R_5_31415001 chr3R_31415001 RAL-908 2481 chr3R 31426862 31426911 chr3R 31426974 31427023 14 110 4.0 2.5 3.2 3.3 161 chr3R 31426862 intron Gprk2 + chr3R 31426942 intron Gprk2 + chr3R 31427023 intron Gprk2 + chr3R_14_31425001 chr3R_31425001 RAL-908 2482 chr3R 31435342 31435388 chr3R 31435514 31435560 11 170 2.5 6.5 4.5 2.0 218 chr3R 31435342 intron Gprk2 + chr3R 31435451 intron Gprk2 + chr3R 31435560 intron Gprk2 + chr3R_11_31435001 chr3R_31435001 RAL-908 2483 chr3R 31606133 31606164 chr3R 31606315 31606346 9 181 2.0 0.0 1.0 4.5 213 chr3R 31606133 intron CycG - chr3R 31606240 intron CycG - chr3R 31606346 intron CycG - chr3R_9_31605001 chr3R_31605001 RAL-908 2484 chr3R 31630043 31630077 chr3R 31630168 31630202 10 122 1.5 2.0 1.8 3.6 159 chr3R 31630043 intron kek6 + chr3R 31630122 intron kek6 + chr3R 31630202 intron kek6 + chr3R_10_31630001 chr3R_31630001 RAL-908 2485 chr3R 31691518 31691561 chr3R 31696304 31696347 Doc 11 4781 3.5 4.0 3.8 2.3 4829 chr3R 31691518 intergenic not near genes chr3R 31693932 intergenic not near genes chr3R 31696347 intergenic not near genes chr3R_11_31690001 chr3R_31690001 RAL-908 2486 chr3R 31726634 31726691 chr3R 31726744 31726796 9 106 1.5 5.0 3.2 2.1 162 chr3R 31726634 intron ttk + chr3R 31726715 intron ttk + chr3R 31726796 intron ttk + chr3R_9_31725001 chr3R_31725001 RAL-908 2487 chr3R 31774852 31774885 chr3R 31775017 31775050 12 165 6.5 8.0 7.2 1.5 198 chr3R 31774852 3` UTR sip3 + chr3R 31774951 3` UTR sip3 + chr3R 31775050 3` UTR,3` UTR sip3 +,CG2126 - chr3R_12_31770001 chr3R_31770001 RAL-908 2488 chr3R 31851216 31851261 chr3R 31851319 31851319 20 100 6.5 9.0 7.8 2.3 103 chr3R 31851216 intergenic heph - chr3R 31851268 intergenic heph - chr3R 31851319 intergenic heph - chr3R_20_31850001 chr3R_31850001 RAL-908 2489 chr3R 31880276 31880327 chr3R 31880369 31880405 10 85 1.5 2.0 1.8 3.6 129 chr3R 31880276 intron heph - chr3R 31880340 intron heph - chr3R 31880405 intron heph - chr3R_10_31880001 chr3R_31880001 RAL-908 2490 chr3R 31911678 31911807 chr3R 31911782 31911912 11 103 0.0 0.0 0.0 11.0 234 chr3R 31911678 intron heph - chr3R 31911795 intron heph - chr3R 31911912 intron heph - chr3R_11_31910001 chr3R_31910001 RAL-908 2491 chr3R 31931173 31931208 chr3R 31931276 31931311 12 101 3.5 2.5 3.0 3.0 138 chr3R 31931173 intron heph - chr3R 31931242 intron heph - chr3R 31931311 intron heph - chr3R_12_31930001 chr3R_31930001 RAL-908 2492 chr3R 31953120 31953166 chr3R 31953218 31953264 15 97 2.0 3.5 2.8 3.9 144 chr3R 31953120 intron heph - chr3R 31953192 intron heph - chr3R 31953264 intron heph - chr3R_15_31950001 chr3R_31950001 RAL-908 2493 chr3R 31991086 31991126 chr3R 31991185 31991225 12 98 7.0 6.5 6.8 1.5 139 chr3R 31991086 intron heph - chr3R 31991156 intron heph - chr3R 31991225 intron heph - chr3R_12_31990001 chr3R_31990001 RAL-908 2494 chr3R 31997982 31998019 chr3R 32005472 32005500 blood 5 7488 5.0 6.0 5.5 0.8 7518 chr3R 31997982 intron heph - chr3R 32001741 intron heph - chr3R 32005500 intron heph - chr3R_5_32000001 chr3R_32000001 RAL-908 2495 chr3R 32013253 32013299 chr3R 32013391 32013420 12 133 6.0 2.0 4.0 2.4 167 chr3R 32013253 intron,5` UTR heph -,CR45556 + chr3R 32013336 intron,5` UTR heph -,CR45556 + chr3R 32013420 intron heph - chr3R_12_32010001 chr3R_32010001 RAL-908 2496 chr3R 32039948 32039995 chr3R 32040069 32040116 12 121 3.0 3.5 3.2 2.9 168 chr3R 32039948 intergenic CG2053 + chr3R 32040032 intergenic CG2053 + chr3R 32040116 intergenic CG2053 + chr3R_12_32040001 chr3R_32040001 RAL-908 2497 chr4 76483 76515 chr4 81946 81978 I-element 12 5462 7.0 5.0 6.0 1.7 5495 chr4 76483 intron pan + chr4 79230 intron pan + chr4 81978 intron pan + chr4_12_75001 chr4_75001 RAL-908 2498 chr4 319974 320020 chr4 328170 328216 Stalker2 17 8193 4.5 5.0 4.8 2.9 8242 chr4 319974 3` UTR CG32850 + chr4 324095 intron CG32850 + chr4 328216 3` UTR,3` UTR CG32850 +,PMCA - chr4_17_320001 chr4_320001 RAL-908 2499 chr4 418215 418264 chr4 418329 418378 15 114 6.5 4.0 5.2 2.4 163 chr4 418215 intergenic not near genes chr4 418296 intergenic not near genes chr4 418378 intergenic not near genes chr4_15_415001 chr4_415001 RAL-908 2500 chr4 419464 419513 chr4 419675 419724 4 211 23.0 28.5 25.8 0.1 260 chr4 419464 intergenic not near genes chr4 419594 intergenic not near genes chr4 419724 intergenic not near genes chr4_4_415001 chr4_415001 RAL-908 2501 chr4 654348 654400 chr4 654451 654503 23 103 2.5 3.0 2.8 6.1 155 chr4 654348 intron gw - chr4 654426 intron gw - chr4 654503 intron gw - chr4_23_650001 chr4_650001 RAL-908 2502 chr4 671585 671627 chr4 680188 680218 Tirant 12 8601 5.5 5.5 5.5 1.8 8633 chr4 671585 intron CG11360 + chr4 675902 intron CG11360 + chr4 680218 intron CG11360 + chr4_12_675001 chr4_675001 RAL-908 2503 chr4 702418 702439 chr4 702509 702541 7 101 4.0 0.5 2.2 2.2 123 chr4 702418 intron ey + chr4 702480 intron ey + chr4 702541 intron ey + chr4_7_700001 chr4_700001 RAL-908 2504 chr4 896767 896805 chr4 896864 896903 9 97 9.0 3.0 6.0 1.3 136 chr4 896767 intron unc-13 - chr4 896835 intron unc-13 - chr4 896903 intron unc-13 - chr4_9_895001 chr4_895001 RAL-908 2505 chr4 905551 905592 chr4 905653 905694 14 102 4.0 3.0 3.5 3.1 143 chr4 905551 5` UTR unc-13 - chr4 905622 5` UTR unc-13 - chr4 905694 5` UTR unc-13 - chr4_14_905001 chr4_905001 RAL-908 2506 chr4 958794 958811 chr4 959010 959012 7 214 1.0 0.5 0.8 3.9 218 chr4 958794 intergenic 4E-T -,CR45201 - chr4 958903 intergenic CR45201 - chr4 959012 intergenic CR45201 - chr4_7_955001 chr4_955001 RAL-908 2507 chr4 1231215 1231249 chr4 1231367 1231390 7 149 8.0 2.0 5.0 1.2 175 chr4 1231215 intron Caps + chr4 1231302 intron Caps + chr4 1231390 intron Caps + chr4_7_1230001 chr4_1230001 RAL-908 2508 chr4 1250550 1250582 chr4 1250655 1250688 10 106 1.0 6.0 3.5 2.2 138 chr4 1250550 intron Caps + chr4 1250619 intron Caps + chr4 1250688 intron Caps + chr4_10_1250001 chr4_1250001 RAL-908 2509 chrX 178895 178914 chrX 178998 179017 4 102 1.5 7.5 4.5 0.7 122 chrX 178895 intron tyn + chrX 178956 intron tyn + chrX 179017 intron tyn + chrX_4_175001 chrX_175001 RAL-908 2510 chrX 201018 201059 chrX 201114 201157 7 94 4.5 1.5 3.0 1.8 139 chrX 201018 intergenic not near genes chrX 201088 intergenic not near genes chrX 201157 intergenic not near genes chrX_7_200001 chrX_200001 RAL-908 2511 chrX 295836 295881 chrX 303476 303521 412 11 7638 3.5 5.0 4.2 2.1 7685 chrX 295836 intron CG3777 + chrX 299678 intron CG3777 + chrX 303521 intron CG3777 + chrX_11_295001 chrX_295001 RAL-908 2512 chrX 318469 318500 chrX 323560 323586 flea 8 5102 4.0 5.5 4.8 1.4 5117 chrX 318469 intron,intron CG3777 +,CG32816 - chrX 321028 intron,intron CG3777 +,CG32816 - chrX 323586 intron,intron CG3777 +,CG32816 - chrX_8_320001 chrX_320001 RAL-908 2513 chrX 367022 367069 chrX 367139 367186 11 117 3.0 2.0 2.5 3.1 164 chrX 367022 intron,5` UTR CG32816 -,yar + chrX 367104 intron CG32816 - chrX 367186 intron CG32816 - chrX_11_365001 chrX_365001 RAL-908 2514 chrX 428400 428447 chrX 434605 434652 3S18 13 6205 4.0 6.0 5.0 2.2 6252 chrX 428400 intron CG32816 - chrX 431526 intron CG32816 - chrX 434652 intron CG32816 - chrX_13_430001 chrX_430001 RAL-908 2515 chrX 449878 449920 chrX 449995 450037 8 117 1.0 2.0 1.5 3.2 159 chrX 449878 intron CG32816 - chrX 449958 intron CG32816 - chrX 450037 intron CG32816 - chrX_8_445001 chrX_445001 RAL-908 2516 chrX 450348 450395 chrX 450446 450493 7 98 1.0 3.0 2.0 2.3 145 chrX 450348 intron CG32816 - chrX 450420 intron CG32816 - chrX 450493 intron CG32816 - chrX_7_450001 chrX_450001 RAL-908 2517 chrX 569325 569374 chrX 569460 569499 7 120 3.0 1.5 2.2 2.2 174 chrX 569325 intron Appl + chrX 569412 intron Appl + chrX 569499 intron Appl + chrX_7_565001 chrX_565001 RAL-908 2518 chrX 611118 611167 chrX 611228 611277 10 109 2.0 2.5 2.2 3.1 159 chrX 611118 intron CG13366 - chrX 611198 intron CG13366 - chrX 611277 intron CG13366 - chrX_10_610001 chrX_610001 RAL-908 2519 chrX 667631 667639 chrX 667735 667738 4 103 7.5 2.5 5.0 0.7 107 chrX 667631 intergenic not near genes chrX 667684 intergenic not near genes chrX 667738 intergenic not near genes chrX_4_665001 chrX_665001 RAL-908 2520 chrX 667649 667669 chrX 667733 667773 6 101 4.0 2.5 3.2 1.4 124 chrX 667649 intergenic not near genes chrX 667711 intergenic not near genes chrX 667773 intergenic not near genes chrX_6_665001 chrX_665001 RAL-908 2521 chrX 670256 670263 chrX 670349 670363 4 97 0.0 3.0 1.5 1.6 107 chrX 670256 intergenic not near genes chrX 670310 intergenic not near genes chrX 670363 intergenic not near genes chrX_4_670001 chrX_670001 RAL-908 2522 chrX 670271 670293 chrX 670344 670360 5 84 0.0 2.5 1.2 2.3 89 chrX 670271 intergenic not near genes chrX 670316 intergenic not near genes chrX 670360 intergenic not near genes chrX_5_670001 chrX_670001 RAL-908 2523 chrX 680824 680868 chrX 680927 680960 7 95 1.5 3.5 2.5 2.0 136 chrX 680824 intergenic not near genes chrX 680892 intergenic not near genes chrX 680960 intergenic not near genes chrX_7_680001 chrX_680001 RAL-908 2524 chrX 695284 695322 chrX 695368 695419 10 95 2.5 4.0 3.2 2.4 135 chrX 695284 intron sdk + chrX 695352 intron sdk + chrX 695419 intron sdk + chrX_10_695001 chrX_695001 RAL-908 2525 chrX 701735 701735 chrX 12946233 12946235 9 12244499 21.5 17.0 19.2 0.4 12244500 chrX 701735 intron sdk + chrX 6823985 exon Atx-1 + chrX 12946235 3` UTR fne + chrX_9_6820001 chrX_6820001 RAL-908 2526 chrX 703689 703730 chrX 704010 704051 18 320 3.0 3.5 3.2 4.3 362 chrX 703689 intron sdk + chrX 703870 intron sdk + chrX 704051 intron sdk + chrX_18_700001 chrX_700001 RAL-908 2527 chrX 706775 706824 chrX 707163 707208 9 385 0.0 3.5 1.8 3.2 433 chrX 706775 intron sdk + chrX 706992 intron sdk + chrX 707208 intron sdk + chrX_9_705001 chrX_705001 RAL-908 2528 chrX 778106 778159 chrX 778216 778245 9 107 2.0 0.0 1.0 4.5 139 chrX 778106 intron fz3 + chrX 778176 intron fz3 + chrX 778245 intron fz3 + chrX_9_775001 chrX_775001 RAL-908 2529 chrX 806762 806808 chrX 806878 806924 7 116 1.0 1.5 1.2 3.2 162 chrX 806762 intron Sec22 + chrX 806843 intron Sec22 + chrX 806924 intron Sec22 + chrX_7_805001 chrX_805001 RAL-908 2530 chrX 812250 812288 chrX 817899 817937 297 11 5648 4.0 7.0 5.5 1.7 5687 chrX 812250 intron CG43867 - chrX 815094 intron CG43867 - chrX 817937 intron CG43867 - chrX_11_815001 chrX_815001 RAL-908 2531 chrX 827599 827634 chrX 835398 835466 roo 7 7810 5.5 0.5 3.0 1.8 7867 chrX 827599 intron CG43867 - chrX 831532 intron CG43867 - chrX 835466 intron CG43867 - chrX_7_830001 chrX_830001 RAL-908 2532 chrX 906688 906732 chrX 908497 908541 S-element 10 1808 2.0 19.5 10.8 0.8 1853 chrX 906688 intron CG43867 - chrX 907614 intron CG43867 - chrX 908541 intron CG43867 - chrX_10_905001 chrX_905001 RAL-908 2533 chrX 1051061 1051085 chrX 1051159 1051183 5 97 8.5 9.0 8.8 0.5 122 chrX 1051061 intron CR44779 + chrX 1051122 intron CR44779 + chrX 1051183 intron CR44779 + chrX_5_1050001 chrX_1050001 RAL-908 2534 chrX 1053119 1053120 chrX 16983077 16983077 5 15929957 12.5 6.0 9.2 0.5 15929958 chrX 1053119 intron CR44779 + chrX 9018098 intron,intron rdgA +,CR43836 - chrX 16983077 intron CG45002 - chrX_5_9015001 chrX_9015001 RAL-908 2535 chrX 1357762 1357803 chrX 1367952 1367993 Doc 9 10190 4.0 4.0 4.0 1.8 10231 chrX 1357762 intergenic png - chrX 1362878 intergenic not near genes chrX 1367993 intergenic not near genes chrX_9_1360001 chrX_1360001 RAL-908 2536 chrX 1386367 1386413 chrX 1386472 1386488 10 100 2.5 1.5 2.0 3.3 121 chrX 1386367 intron CG32813 + chrX 1386428 intron CG32813 + chrX 1386488 intron CG32813 + chrX_10_1385001 chrX_1385001 RAL-908 2537 chrX 1461573 1461582 chrX 1461787 1461802 4 218 1.5 4.0 2.8 1.1 229 chrX 1461573 exon CG14787 - chrX 1461688 intergenic CG14787 -,Ns3 - chrX 1461802 intergenic Ns3 -,CG14787 - chrX_4_1460001 chrX_1460001 RAL-908 2538 chrX 1518022 1518069 chrX 1523444 1523491 jockey 17 5420 2.0 3.0 2.5 4.9 5469 chrX 1518022 intergenic inc + chrX 1520756 intergenic not near genes chrX 1523491 intergenic not near genes chrX_17_1520001 chrX_1520001 RAL-908 2539 chrX 1627966 1627982 chrX 1635454 1635470 gtwin 4 7486 3.5 2.5 3.0 1.0 7504 chrX 1627966 intron,intron Mur2B -,br + chrX 1631718 intron,intron Mur2B -,br + chrX 1635470 intron,intron Mur2B -,br + chrX_4_1630001 chrX_1630001 RAL-908 2540 chrX 1651638 1651647 chrX 1651739 1651748 5 100 9.5 6.0 7.8 0.6 110 chrX 1651638 intron Mur2B - chrX 1651693 intron Mur2B - chrX 1651748 intron Mur2B - chrX_5_1650001 chrX_1650001 RAL-908 2541 chrX 1674836 1674877 chrX 1674932 1674936 9 90 6.0 2.0 4.0 1.8 100 chrX 1674836 3` UTR CG32809 - chrX 1674886 3` UTR CG32809 - chrX 1674936 3` UTR CG32809 - chrX_9_1670001 chrX_1670001 RAL-908 2542 chrX 1930522 1930569 chrX 1938113 1938119 opus 12 7586 7.0 7.5 7.2 1.5 7597 chrX 1930522 intergenic CG11596 + chrX 1934320 intergenic not near genes chrX 1938119 3` UTR CG3857 - chrX_12_1930001 chrX_1930001 RAL-908 2543 chrX 2069354 2069401 chrX 2069474 2069521 13 119 2.0 4.5 3.2 3.1 167 chrX 2069354 intron,exon CG4199 -,CG4194 + chrX 2069438 intron,3` UTR CG4199 -,CG4194 + chrX 2069521 intron,3` UTR CG4199 -,CG4194 + chrX_13_2065001 chrX_2065001 RAL-908 2544 chrX 2095917 2095948 chrX 2096013 2096044 8 95 3.0 0.0 1.5 3.2 127 chrX 2095917 intron csw + chrX 2095980 intron csw + chrX 2096044 intron csw + chrX_8_2095001 chrX_2095001 RAL-908 2545 chrX 2146634 2146683 chrX 2146746 2146796 7 107 3.5 2.0 2.8 1.8 162 chrX 2146634 intron Pgd + chrX 2146715 intron Pgd + chrX 2146796 intron Pgd + chrX_7_2145001 chrX_2145001 RAL-908 2546 chrX 2187590 2187631 chrX 2188335 2188372 8 742 27.0 9.0 18.0 0.4 782 chrX 2187590 3` UTR CG17777 + chrX 2187981 exon CG3457 + chrX 2188372 exon CG3457 + chrX_8_2185001 chrX_2185001 RAL-908 2547 chrX 2291632 2291669 chrX 2291729 2291779 11 101 4.0 1.5 2.8 2.9 147 chrX 2291632 intron CG2865 - chrX 2291706 intron CG2865 - chrX 2291779 intron CG2865 - chrX_11_2290001 chrX_2290001 RAL-908 2548 chrX 2371615 2371665 chrX 2371717 2371767 12 99 2.5 3.5 3.0 3.0 152 chrX 2371615 intron PsGEF - chrX 2371691 intron PsGEF - chrX 2371767 intron PsGEF - chrX_12_2370001 chrX_2370001 RAL-908 2549 chrX 2429653 2429664 chrX 2429753 2429765 5 101 0.0 6.5 3.2 1.2 112 chrX 2429653 intergenic not near genes chrX 2429709 intergenic not near genes chrX 2429765 intergenic not near genes chrX_5_2425001 chrX_2425001 RAL-908 2550 chrX 2471247 2471252 chrX 2471343 2471348 6 96 1.5 6.0 3.8 1.2 101 chrX 2471247 intron trol - chrX 2471298 intron trol - chrX 2471348 intron trol - chrX_6_2470001 chrX_2470001 RAL-908 2551 chrX 2578802 2578842 chrX 2578905 2578951 11 110 1.5 5.5 3.5 2.4 149 chrX 2578802 intergenic Pdfr +,Vha36-3 - chrX 2578876 intergenic Vha36-3 -,Pdfr + chrX 2578951 intergenic Vha36-3 -,Pdfr + chrX_11_2575001 chrX_2575001 RAL-908 2552 chrX 2658121 2658161 chrX 2658217 2658250 8 95 2.0 4.5 3.2 1.9 129 chrX 2658121 intron sgg + chrX 2658186 intron sgg + chrX 2658250 intron sgg + chrX_8_2655001 chrX_2655001 RAL-908 2553 chrX 2664368 2664417 chrX 2665534 2665568 1360 18 1164 5.0 5.0 5.0 3.0 1200 chrX 2664368 intron sgg + chrX 2664968 intron sgg + chrX 2665568 intron sgg + chrX_18_2660001 chrX_2660001 RAL-908 2554 chrX 2844885 2844930 chrX 2852315 2852360 mdg1 14 7429 1.5 2.5 2.0 4.7 7475 chrX 2844885 intron kirre + chrX 2848622 intron kirre + chrX 2852360 intron kirre + chrX_14_2845001 chrX_2845001 RAL-908 2555 chrX 2917074 2917117 chrX 2917174 2917217 11 99 3.0 2.5 2.8 2.9 143 chrX 2917074 intron kirre + chrX 2917146 intron kirre + chrX 2917217 intron kirre + chrX_11_2915001 chrX_2915001 RAL-908 2556 chrX 2972012 2972055 chrX 2972172 2972210 6 159 3.0 3.0 3.0 1.5 198 chrX 2972012 intron,intron kirre +,rst - chrX 2972111 intron,intron kirre +,rst - chrX 2972210 intron,intron kirre +,rst - chrX_6_2970001 chrX_2970001 RAL-908 2557 chrX 3031512 3031553 chrX 3032011 3032052 7 499 13.0 20.5 16.8 0.4 540 chrX 3031512 intron kirre + chrX 3031782 intron kirre + chrX 3032052 intron kirre + chrX_7_3030001 chrX_3030001 RAL-908 2558 chrX 3058024 3058046 chrX 3058261 3058307 pogo 4 255 5.5 2.0 3.8 0.8 283 chrX 3058024 intron kirre + chrX 3058166 intron kirre + chrX 3058307 intron kirre + chrX_4_3055001 chrX_3055001 RAL-908 2559 chrX 3109430 3109474 chrX 3109527 3109570 13 96 4.0 1.5 2.8 3.4 140 chrX 3109430 intron kirre + chrX 3109500 intron kirre + chrX 3109570 intron kirre + chrX_13_3105001 chrX_3105001 RAL-908 2560 chrX 3218495 3218538 chrX 3227663 3227707 roo 5 9168 2.0 6.5 4.2 1.0 9212 chrX 3218495 intron dnc + chrX 3223101 intron dnc + chrX 3227707 intron dnc + chrX_5_3220001 chrX_3220001 RAL-908 2561 chrX 3243614 3243641 chrX 3243724 3243751 10 110 6.0 6.0 6.0 1.4 137 chrX 3243614 intron dnc + chrX 3243682 intron dnc + chrX 3243751 intron dnc + chrX_10_3240001 chrX_3240001 RAL-908 2562 chrX 3243642 3243659 chrX 3243722 3243769 6 103 4.0 6.0 5.0 1.0 127 chrX 3243642 intron dnc + chrX 3243706 intron dnc + chrX 3243769 intron dnc + chrX_6_3240001 chrX_3240001 RAL-908 2563 chrX 3295704 3295718 chrX 3295819 3295833 8 114 0.5 4.0 2.2 2.5 129 chrX 3295704 intron dnc + chrX 3295768 intron dnc + chrX 3295833 intron dnc + chrX_8_3295001 chrX_3295001 RAL-908 2564 chrX 3398122 3398157 chrX 3398223 3398257 5 101 4.0 3.5 3.8 1.0 135 chrX 3398122 intron,intron CR44999 +,CG12535 - chrX 3398190 intron,intron CR44999 +,CG12535 - chrX 3398257 intron,intron CR44999 +,CG12535 - chrX_5_3395001 chrX_3395001 RAL-908 2565 chrX 3408992 3409016 chrX 3409089 3409113 6 97 0.0 2.5 1.2 2.7 121 chrX 3408992 intron,intron CR44999 +,CG12535 - chrX 3409052 intron,intron CR44999 +,CG12535 - chrX 3409113 intron,intron CR44999 +,CG12535 - chrX_6_3405001 chrX_3405001 RAL-908 2566 chrX 3410447 3410470 chrX 3410589 3410612 4 139 4.0 3.0 3.5 0.9 165 chrX 3410447 intron,intron CR44999 +,CG12535 - chrX 3410530 intron,intron CR44999 +,CG12535 - chrX 3410612 intron,intron CR44999 +,CG12535 - chrX_4_3410001 chrX_3410001 RAL-908 2567 chrX 3410480 3410494 chrX 3410587 3410625 7 135 3.0 3.0 3.0 1.8 145 chrX 3410480 intron,intron CR44999 +,CG12535 - chrX 3410552 intron,intron CR44999 +,CG12535 - chrX 3410625 intron,intron CR44999 +,CG12535 - chrX_7_3410001 chrX_3410001 RAL-908 2568 chrX 3414994 3415049 chrX 3421202 3421254 3S18 11 6204 0.0 4.5 2.2 3.4 6260 chrX 3414994 intron,intron CR44999 +,CG12535 - chrX 3418124 intron,intron CR44999 +,CG12535 - chrX 3421254 intron,intron CR44999 +,CG12535 - chrX_11_3415001 chrX_3415001 RAL-908 2569 chrX 3493074 3493116 chrX 3502253 3502295 roo 7 9175 1.0 1.0 1.0 3.5 9221 chrX 3493074 intron,intron CR44999 +,Gas8 - chrX 3497684 intron,intron CR44999 +,Gas8 - chrX 3502295 intron,intron CR44999 +,Gas8 - chrX_7_3495001 chrX_3495001 RAL-908 2570 chrX 3567273 3567286 chrX 3567377 3567391 4 104 0.0 5.0 2.5 1.1 118 chrX 3567273 intron,intron CG32791 -,ppk8 + chrX 3567332 intron,intron CG32791 -,ppk8 + chrX 3567391 intron,intron CG32791 -,ppk8 + chrX_4_3565001 chrX_3565001 RAL-908 2571 chrX 3597097 3597129 chrX 3597205 3597237 14 107 1.5 8.0 4.8 2.4 140 chrX 3597097 intron AstA-R1 + chrX 3597167 intron AstA-R1 + chrX 3597237 intron AstA-R1 + chrX_14_3595001 chrX_3595001 RAL-908 2572 chrX 3597535 3597555 chrX 3619723 3619743 roo 9 22188 4.5 1.0 2.8 2.4 22208 chrX 3597535 intron AstA-R1 + chrX 3608639 intron AstA-R1 + chrX 3619743 intron AstA-R1 + chrX_9_3605001 chrX_3605001 RAL-908 2573 chrX 3626131 3626243 chrX 3626236 3626397 9 138 0.0 0.0 0.0 9.0 266 chrX 3626131 intron AstA-R1 + chrX 3626264 intron AstA-R1 + chrX 3626397 intron AstA-R1 + chrX_9_3625001 chrX_3625001 RAL-908 2574 chrX 3630523 3630572 chrX 3630619 3630668 8 94 0.5 1.0 0.8 4.4 145 chrX 3630523 intron AstA-R1 + chrX 3630596 intron AstA-R1 + chrX 3630668 intron AstA-R1 + chrX_8_3630001 chrX_3630001 RAL-908 2575 chrX 3713081 3713136 chrX 3713209 3713265 15 129 4.0 1.5 2.8 3.9 184 chrX 3713081 intron Rala - chrX 3713173 intron Rala - chrX 3713265 intron Rala - chrX_15_3710001 chrX_3710001 RAL-908 2576 chrX 3768267 3768287 chrX 3768363 3768369 4 90 3.0 2.5 2.8 1.1 102 chrX 3768267 intron tlk + chrX 3768318 intron tlk + chrX 3768369 intron tlk + chrX_4_3765001 chrX_3765001 RAL-908 2577 chrX 3842305 3842348 chrX 3842566 3842609 pogo 9 261 3.0 7.0 5.0 1.5 304 chrX 3842305 intron ec + chrX 3842457 intron ec + chrX 3842609 intron ec + chrX_9_3840001 chrX_3840001 RAL-908 2578 chrX 3862816 3862842 chrX 3862923 3862946 4 106 2.0 6.0 4.0 0.8 130 chrX 3862816 intergenic yin - chrX 3862881 intergenic yin - chrX 3862946 intergenic yin - chrX_4_3860001 chrX_3860001 RAL-908 2579 chrX 3874724 3874774 chrX 3874820 3874875 15 97 4.0 3.5 3.8 3.1 151 chrX 3874724 intron CG2930 + chrX 3874800 intron CG2930 + chrX 3874875 intron CG2930 + chrX_15_3870001 chrX_3870001 RAL-908 2580 chrX 3986847 3986855 chrX 3994499 3994508 412 4 7652 8.0 4.0 6.0 0.6 7661 chrX 3986847 intergenic not near genes chrX 3990678 intergenic not near genes chrX 3994508 intergenic not near genes chrX_4_3990001 chrX_3990001 RAL-908 2581 chrX 3986859 3986887 chrX 3994494 3994540 412 6 7650 5.0 3.5 4.2 1.2 7681 chrX 3986859 intergenic not near genes chrX 3990700 intergenic not near genes chrX 3994540 intergenic not near genes chrX_6_3990001 chrX_3990001 RAL-908 2582 chrX 4029512 4029548 chrX 4029722 4029758 4 206 1.0 2.0 1.5 1.6 246 chrX 4029512 intergenic not near genes chrX 4029635 intergenic not near genes chrX 4029758 intergenic not near genes chrX_4_4025001 chrX_4025001 RAL-908 2583 chrX 4132652 4132693 chrX 4132841 4132882 5 189 2.5 4.0 3.2 1.2 230 chrX 4132652 3` UTR GlcAT-I + chrX 4132767 3` UTR GlcAT-I + chrX 4132882 intergenic Fas2 -,GlcAT-I + chrX_5_4130001 chrX_4130001 RAL-908 2584 chrX 4157874 4157916 chrX 4164929 4164971 297 6 7052 3.5 2.5 3.0 1.5 7097 chrX 4157874 intron Fas2 - chrX 4161422 intron Fas2 - chrX 4164971 intron Fas2 - chrX_6_4160001 chrX_4160001 RAL-908 2585 chrX 4276468 4276510 chrX 4276567 4276590 7 93 6.5 3.0 4.8 1.2 122 chrX 4276468 intergenic CG15577 - chrX 4276529 3` UTR CG15577 - chrX 4276590 3` UTR CG15577 - chrX_7_4275001 chrX_4275001 RAL-908 2586 chrX 4299482 4299533 chrX 4299968 4300018 8 485 1.5 2.5 2.0 2.7 536 chrX 4299482 intergenic not near genes chrX 4299750 intergenic CG12692 - chrX 4300018 intergenic CG12692 - chrX_8_4295001 chrX_4295001 RAL-908 2587 chrX 4389377 4389380 chrX 12946233 12946234 8 8556856 16.5 17.0 16.8 0.4 8556857 chrX 4389377 intron CR32773 - chrX 8667806 intergenic not near genes chrX 12946234 3` UTR fne + chrX_8_8665001 chrX_8665001 RAL-908 2588 chrX 4396962 4397004 chrX 4397067 4397109 10 103 2.5 4.5 3.5 2.2 147 chrX 4396962 intron CR32773 - chrX 4397036 intron CR32773 - chrX 4397109 intron CR32773 - chrX_10_4395001 chrX_4395001 RAL-908 2589 chrX 4409121 4409154 chrX 4409226 4409259 10 104 6.5 3.5 5.0 1.7 138 chrX 4409121 intron CR32773 - chrX 4409190 intron CR32773 - chrX 4409259 intron CR32773 - chrX_10_4405001 chrX_4405001 RAL-908 2590 chrX 4515826 4515857 chrX 4515924 4515935 5 94 2.0 3.0 2.5 1.4 109 chrX 4515826 intron CR32773 - chrX 4515880 intron CR32773 - chrX 4515935 intron CR32773 - chrX_5_4515001 chrX_4515001 RAL-908 2591 chrX 4525739 4525770 chrX 4525851 4525882 5 112 3.5 4.0 3.8 1.0 143 chrX 4525739 intron CR32773 - chrX 4525810 intron CR32773 - chrX 4525882 intron CR32773 - chrX_5_4525001 chrX_4525001 RAL-908 2592 chrX 4700379 4700425 chrX 4700742 4700788 jockey 15 362 3.0 7.0 5.0 2.5 409 chrX 4700379 3` UTR ctp + chrX 4700584 3` UTR ctp + chrX 4700788 3` UTR ctp + chrX_15_4700001 chrX_4700001 RAL-908 2593 chrX 4721499 4721550 chrX 4721770 4721816 15 270 2.5 4.5 3.5 3.3 317 chrX 4721499 intron Proc-R + chrX 4721658 intron Proc-R + chrX 4721816 intron Proc-R + chrX_15_4720001 chrX_4720001 RAL-908 2594 chrX 4827946 4828000 chrX 4835337 4835376 Stalker4 7 7385 1.5 3.0 2.2 2.2 7430 chrX 4827946 intergenic not near genes chrX 4831661 intergenic not near genes chrX 4835376 intergenic not near genes chrX_7_4830001 chrX_4830001 RAL-908 2595 chrX 4871188 4871224 chrX 4871308 4871344 6 120 1.5 1.0 1.2 2.7 156 chrX 4871188 intron CG42594 + chrX 4871266 intron CG42594 + chrX 4871344 intron CG42594 + chrX_6_4870001 chrX_4870001 RAL-908 2596 chrX 4948741 4948776 chrX 4948858 4948893 10 117 4.0 4.0 4.0 2.0 152 chrX 4948741 intron Ptp4E + chrX 4948817 intron Ptp4E + chrX 4948893 intron Ptp4E + chrX_10_4945001 chrX_4945001 RAL-908 2597 chrX 4975562 4975605 chrX 4975759 4975802 10 196 2.5 2.5 2.5 2.9 240 chrX 4975562 intron CR44833 - chrX 4975682 intron CR44833 - chrX 4975802 intron CR44833 - chrX_10_4975001 chrX_4975001 RAL-908 2598 chrX 5023538 5023549 chrX 5023643 5023654 4 105 4.5 2.5 3.5 0.9 116 chrX 5023538 intron CR44833 - chrX 5023596 intron CR44833 - chrX 5023654 intron CR44833 - chrX_4_5020001 chrX_5020001 RAL-908 2599 chrX 5023557 5023569 chrX 5023642 5023674 8 98 1.5 2.5 2.0 2.7 117 chrX 5023557 intron CR44833 - chrX 5023616 intron CR44833 - chrX 5023674 intron CR44833 - chrX_8_5020001 chrX_5020001 RAL-908 2600 chrX 5096272 5096289 chrX 5103847 5103874 springer 6 7583 4.0 3.0 3.5 1.3 7602 chrX 5096272 intron,intron CG15465 +,rg + chrX 5100073 intron,intron CG15465 +,rg + chrX 5103874 intron,intron CG15465 +,rg + chrX_6_5100001 chrX_5100001 RAL-908 2601 chrX 5134084 5134103 chrX 5134170 5134192 4 92 3.0 3.5 3.2 1.0 108 chrX 5134084 intron,intron CG15465 +,rg + chrX 5134138 intron,intron CG15465 +,rg + chrX 5134192 intron,intron CG15465 +,rg + chrX_4_5130001 chrX_5130001 RAL-908 2602 chrX 5159713 5159745 chrX 5159821 5159860 11 113 2.0 4.5 3.2 2.6 147 chrX 5159713 intron,intron CG15465 +,rg + chrX 5159786 intron,intron CG15465 +,rg + chrX 5159860 intron,intron CG15465 +,rg + chrX_11_5155001 chrX_5155001 RAL-908 2603 chrX 5272804 5272849 chrX 5272911 5272956 10 106 4.0 3.0 3.5 2.2 152 chrX 5272804 intergenic not near genes chrX 5272880 intergenic not near genes chrX 5272956 intergenic not near genes chrX_10_5270001 chrX_5270001 RAL-908 2604 chrX 5338692 5338707 chrX 5339965 5339979 jockey 5 1271 4.0 1.0 2.5 1.4 1287 chrX 5338692 intergenic not near genes chrX 5339336 intergenic not near genes chrX 5339979 intergenic SK + chrX_5_5335001 chrX_5335001 RAL-908 2605 chrX 5349258 5349309 chrX 5349355 5349406 15 96 1.5 4.0 2.8 3.9 148 chrX 5349258 intron SK + chrX 5349332 intron SK + chrX 5349406 intron SK + chrX_15_5345001 chrX_5345001 RAL-908 2606 chrX 5366289 5366335 chrX 5366437 5366483 18 148 2.5 4.5 3.5 4.0 194 chrX 5366289 intron SK + chrX 5366386 intron SK + chrX 5366483 intron SK + chrX_18_5365001 chrX_5365001 RAL-908 2607 chrX 5474594 5474628 chrX 5474715 5474731 5 117 4.5 1.5 3.0 1.2 137 chrX 5474594 intron SPR + chrX 5474662 intron SPR + chrX 5474731 intron SPR + chrX_5_5470001 chrX_5470001 RAL-908 2608 chrX 5512032 5512047 chrX 5512135 5512145 5 102 8.0 0.0 4.0 1.0 113 chrX 5512032 intergenic not near genes chrX 5512088 intergenic not near genes chrX 5512145 intergenic not near genes chrX_5_5510001 chrX_5510001 RAL-908 2609 chrX 5798860 5798891 chrX 5799042 5799073 5 182 1.5 2.0 1.8 1.8 213 chrX 5798860 intergenic not near genes chrX 5798966 intergenic not near genes chrX 5799073 intergenic not near genes chrX_5_5795001 chrX_5795001 RAL-908 2610 chrX 5805366 5805401 chrX 5805550 5805585 11 183 1.0 3.5 2.2 3.4 219 chrX 5805366 intergenic Cpr5C + chrX 5805476 intergenic Cpr5C + chrX 5805585 intergenic Cpr5C + chrX_11_5805001 chrX_5805001 RAL-908 2611 chrX 5843271 5843323 chrX 5843376 5843428 6 99 1.0 1.5 1.2 2.7 157 chrX 5843271 intergenic not near genes chrX 5843350 intergenic not near genes chrX 5843428 intergenic not near genes chrX_6_5840001 chrX_5840001 RAL-908 2612 chrX 5883789 5883835 chrX 5884050 5884096 pogo 15 257 4.5 5.0 4.8 2.6 307 chrX 5883789 intron CR45668 - chrX 5883942 intron CR45668 - chrX 5884096 intron CR45668 - chrX_15_5880001 chrX_5880001 RAL-908 2613 chrX 5884163 5884190 chrX 5884410 5884451 pogo 9 259 5.0 2.0 3.5 2.0 288 chrX 5884163 intron CR45668 - chrX 5884307 intron CR45668 - chrX 5884451 intron CR45668 - chrX_9_5880001 chrX_5880001 RAL-908 2614 chrX 6080812 6080822 chrX 6080915 6080926 4 102 7.0 1.0 4.0 0.8 114 chrX 6080812 intron CG4660 - chrX 6080869 intron CG4660 - chrX 6080926 intron CG4660 - chrX_4_6080001 chrX_6080001 RAL-908 2615 chrX 6171587 6171615 chrX 6179030 6179068 Quasimodo 8 7451 1.0 5.5 3.2 1.9 7481 chrX 6171587 intron Ca-alpha1T - chrX 6175328 intron Ca-alpha1T - chrX 6179068 intron Ca-alpha1T - chrX_8_6175001 chrX_6175001 RAL-908 2616 chrX 6215509 6215521 chrX 6215610 6215621 4 99 3.5 1.5 2.5 1.1 112 chrX 6215509 intergenic not near genes chrX 6215565 intergenic not near genes chrX 6215621 intergenic not near genes chrX_4_6215001 chrX_6215001 RAL-908 2617 chrX 6388647 6388689 chrX 6388742 6388785 7 96 2.0 2.0 2.0 2.3 138 chrX 6388647 intergenic not near genes chrX 6388716 intergenic not near genes chrX 6388785 intergenic not near genes chrX_7_6385001 chrX_6385001 RAL-908 2618 chrX 6414301 6414340 chrX 6414405 6414444 6 102 2.0 2.5 2.2 1.9 143 chrX 6414301 intergenic not near genes chrX 6414372 intergenic not near genes chrX 6414444 intergenic not near genes chrX_6_6410001 chrX_6410001 RAL-908 2619 chrX 6415236 6415261 chrX 6415946 6415958 8 717 3.0 3.0 3.0 2.0 722 chrX 6415236 intergenic not near genes chrX 6415597 intergenic not near genes chrX 6415958 intergenic not near genes chrX_8_6415001 chrX_6415001 RAL-908 2620 chrX 6487970 6487975 chrX 6488072 6488077 6 102 5.0 8.0 6.5 0.8 107 chrX 6487970 intron CG42340 - chrX 6488024 intron CG42340 - chrX 6488077 intron CG42340 - chrX_6_6485001 chrX_6485001 RAL-908 2621 chrX 6562808 6562849 chrX 6571310 6571344 Tirant 7 8499 2.0 3.0 2.5 2.0 8536 chrX 6562808 intron CG34417 + chrX 6567076 intron CG34417 + chrX 6571344 intron CG34417 + chrX_7_6565001 chrX_6565001 RAL-908 2622 chrX 6897283 6897290 chrX 6897602 6897609 4 319 0.0 3.5 1.8 1.4 326 chrX 6897283 intergenic not near genes chrX 6897446 intergenic not near genes chrX 6897609 intergenic not near genes chrX_4_6895001 chrX_6895001 RAL-908 2623 chrX 6897578 6897582 chrX 7243794 7243798 4 346216 3.5 6.5 5.0 0.7 346220 chrX 6897578 intergenic not near genes chrX 7070688 exon CG4607 + chrX 7243798 intron CR44357 - chrX_4_7070001 chrX_7070001 RAL-908 2624 chrX 6897674 6897696 chrX 6897804 6897812 5 127 2.5 1.0 1.8 1.8 138 chrX 6897674 intergenic not near genes chrX 6897743 intergenic not near genes chrX 6897812 intergenic not near genes chrX_5_6895001 chrX_6895001 RAL-908 2625 chrX 6989485 6989525 chrX 6989592 6989632 6 105 4.0 2.0 3.0 1.5 147 chrX 6989485 intron ogre - chrX 6989558 intron ogre - chrX 6989632 intron ogre - chrX_6_6985001 chrX_6985001 RAL-908 2626 chrX 7023584 7023621 chrX 7030993 7031006 Tabor 8 7405 6.5 3.5 5.0 1.3 7422 chrX 7023584 intron CG12541 - chrX 7027295 intron CG12541 - chrX 7031006 intron CG12541 - chrX_8_7025001 chrX_7025001 RAL-908 2627 chrX 7125234 7125270 chrX 7134413 7134449 roo 9 9179 0.0 6.0 3.0 2.2 9215 chrX 7125234 intergenic not near genes chrX 7129842 intergenic not near genes chrX 7134449 intergenic not near genes chrX_9_7125001 chrX_7125001 RAL-908 2628 chrX 7322881 7322923 chrX 7322985 7323027 10 104 3.0 3.5 3.2 2.4 146 chrX 7322881 intron,intron,intron CR44357 -,CG1677 -,Atg5 - chrX 7322954 intron,intron,intron CR44357 -,CG1677 -,Atg5 - chrX 7323027 intron,intron,intron CR44357 -,CG1677 -,Atg5 - chrX_10_7320001 chrX_7320001 RAL-908 2629 chrX 7357256 7357260 chrX 7357347 7357356 5 94 6.0 6.0 6.0 0.7 100 chrX 7357256 intron,intron CR44357 -,CG1677 - chrX 7357306 intron,intron CR44357 -,CG1677 - chrX 7357356 intron,intron CR44357 -,CG1677 - chrX_5_7355001 chrX_7355001 RAL-908 2630 chrX 7570616 7570667 chrX 7570770 7570821 11 153 2.0 2.0 2.0 3.7 205 chrX 7570616 intergenic not near genes chrX 7570718 intergenic not near genes chrX 7570821 intergenic not near genes chrX_11_7570001 chrX_7570001 RAL-908 2631 chrX 7605341 7605356 chrX 7605437 7605452 7 96 0.5 7.0 3.8 1.5 111 chrX 7605341 intergenic not near genes chrX 7605396 intergenic not near genes chrX 7605452 intergenic not near genes chrX_7_7605001 chrX_7605001 RAL-908 2632 chrX 7658773 7658809 chrX 7658873 7658876 6 96 4.0 3.5 3.8 1.2 103 chrX 7658773 intron ct + chrX 7658824 intron ct + chrX 7658876 intron ct + chrX_6_7655001 chrX_7655001 RAL-908 2633 chrX 7702890 7702928 chrX 7703349 7703387 jockey 9 455 7.0 4.0 5.5 1.4 497 chrX 7702890 intron CHES-1-like - chrX 7703138 intron CHES-1-like - chrX 7703387 intron CHES-1-like - chrX_9_7700001 chrX_7700001 RAL-908 2634 chrX 7720534 7720577 chrX 7720636 7720663 10 97 3.0 3.5 3.2 2.4 129 chrX 7720534 intergenic not near genes chrX 7720598 intergenic not near genes chrX 7720663 intergenic not near genes chrX_10_7720001 chrX_7720001 RAL-908 2635 chrX 7832421 7832462 chrX 7832530 7832571 16 109 3.0 4.0 3.5 3.6 150 chrX 7832421 intron CG1402 + chrX 7832496 intron CG1402 + chrX 7832571 intron CG1402 + chrX_16_7830001 chrX_7830001 RAL-908 2636 chrX 7845717 7845753 chrX 7847228 7847264 hopper2 9 1510 4.0 2.0 3.0 2.2 1547 chrX 7845717 intergenic not near genes chrX 7846490 intergenic not near genes chrX 7847264 intergenic not near genes chrX_9_7845001 chrX_7845001 RAL-908 2637 chrX 8358649 8358678 chrX 8358778 8358807 5 129 4.0 3.5 3.8 1.0 158 chrX 8358649 intron nAChRalpha3 - chrX 8358728 intron nAChRalpha3 - chrX 8358807 intron nAChRalpha3 - chrX_5_8355001 chrX_8355001 RAL-908 2638 chrX 8536745 8536776 chrX 8536841 8536872 9 95 7.0 4.0 5.5 1.4 127 chrX 8536745 intron Nrg + chrX 8536808 intron Nrg + chrX 8536872 intron Nrg + chrX_9_8535001 chrX_8535001 RAL-908 2639 chrX 8538017 8538065 chrX 8538260 8538307 6 242 4.0 3.5 3.8 1.2 290 chrX 8538017 intron Nrg + chrX 8538162 intron Nrg + chrX 8538307 intron Nrg + chrX_6_8535001 chrX_8535001 RAL-908 2640 chrX 8605313 8605346 chrX 8605410 8605443 4 97 2.5 4.5 3.5 0.9 130 chrX 8605313 exon Caf1-180 - chrX 8605378 exon Caf1-180 - chrX 8605443 exon Caf1-180 - chrX_4_8605001 chrX_8605001 RAL-908 2641 chrX 8727382 8727427 chrX 8727479 8727524 11 97 2.0 4.5 3.2 2.6 142 chrX 8727382 intergenic not near genes chrX 8727453 intergenic not near genes chrX 8727524 intergenic not near genes chrX_11_8725001 chrX_8725001 RAL-908 2642 chrX 8743251 8743264 chrX 8743348 8743361 4 98 0.5 2.5 1.5 1.6 110 chrX 8743251 intergenic not near genes chrX 8743306 intergenic not near genes chrX 8743361 intergenic not near genes chrX_4_8740001 chrX_8740001 RAL-908 2643 chrX 8860780 8860797 chrX 8860884 8860901 6 104 0.0 5.5 2.8 1.6 121 chrX 8860780 intron CG12075 + chrX 8860840 intron CG12075 + chrX 8860901 intron CG12075 + chrX_6_8860001 chrX_8860001 RAL-908 2644 chrX 8894978 8895002 chrX 8895084 8895108 6 106 7.5 2.5 5.0 1.0 130 chrX 8894978 intron Moe - chrX 8895043 intron Moe - chrX 8895108 intron Moe - chrX_6_8895001 chrX_8895001 RAL-908 2645 chrX 8922312 8922359 chrX 8922766 8922807 jockey 13 452 2.0 5.5 3.8 2.7 495 chrX 8922312 intron rdgA + chrX 8922560 intron rdgA + chrX 8922807 intron rdgA + chrX_13_8920001 chrX_8920001 RAL-908 2646 chrX 8944885 8944923 chrX 8945132 8945170 7 247 4.0 2.0 3.0 1.8 285 chrX 8944885 intron rdgA + chrX 8945028 intron rdgA + chrX 8945170 intron rdgA + chrX_7_8945001 chrX_8945001 RAL-908 2647 chrX 8948739 8948789 chrX 8956269 8956317 roo 12 7530 1.5 3.0 2.2 3.8 7578 chrX 8948739 intron rdgA + chrX 8952528 intron rdgA + chrX 8956317 intron rdgA + chrX_12_8950001 chrX_8950001 RAL-908 2648 chrX 9187998 9188015 chrX 9188095 9188112 5 96 6.5 4.5 5.5 0.8 114 chrX 9187998 3` UTR mei-P26 + chrX 9188055 3` UTR mei-P26 + chrX 9188112 3` UTR mei-P26 + chrX_5_9185001 chrX_9185001 RAL-908 2649 chrX 9188016 9188029 chrX 9188094 9188126 4 92 4.5 4.5 4.5 0.7 110 chrX 9188016 3` UTR mei-P26 + chrX 9188071 3` UTR mei-P26 + chrX 9188126 3` UTR mei-P26 + chrX_4_9185001 chrX_9185001 RAL-908 2650 chrX 9229893 9229935 chrX 9229993 9230035 10 100 2.5 3.5 3.0 2.5 142 chrX 9229893 intron CG12121 - chrX 9229964 intron CG12121 - chrX 9230035 intron CG12121 - chrX_10_9225001 chrX_9225001 RAL-908 2651 chrX 9337927 9337973 chrX 9338038 9338085 8 109 0.0 1.0 0.5 5.3 158 chrX 9337927 intron CG34449 - chrX 9338006 intron CG34449 - chrX 9338085 exon CG34449 - chrX_8_9335001 chrX_9335001 RAL-908 2652 chrX 9508126 9508161 chrX 9509664 9509698 jockey 10 1536 5.0 2.5 3.8 2.1 1572 chrX 9508126 intron CG32700 - chrX 9508912 intron CG32700 - chrX 9509698 intron CG32700 - chrX_10_9505001 chrX_9505001 RAL-908 2653 chrX 9543380 9543423 chrX 9543479 9543522 13 99 6.0 2.5 4.2 2.5 142 chrX 9543380 intron CG32700 - chrX 9543451 intron CG32700 - chrX 9543522 intron CG32700 - chrX_13_9540001 chrX_9540001 RAL-908 2654 chrX 9575775 9575822 chrX 9576119 9576153 mdg3 8 341 4.5 4.0 4.2 1.5 378 chrX 9575775 intron,exon CG32699 -,CG42395 - chrX 9575964 intron,intron CG32699 -,CG42395 - chrX 9576153 intron,5` UTR CG32699 -,CG42395 - chrX_8_9575001 chrX_9575001 RAL-908 2655 chrX 9794784 9794788 chrX 9794882 9794886 4 98 2.0 5.5 3.8 0.8 102 chrX 9794784 intron CG32698 + chrX 9794835 intron CG32698 + chrX 9794886 intron CG32698 + chrX_4_9790001 chrX_9790001 RAL-908 2656 chrX 9923380 9923420 chrX 9923489 9923531 7 105 2.5 4.0 3.2 1.7 151 chrX 9923380 intergenic not near genes chrX 9923456 intergenic not near genes chrX 9923531 intergenic not near genes chrX_7_9920001 chrX_9920001 RAL-908 2657 chrX 9988504 9988517 chrX 9988628 9988641 4 124 2.5 4.0 3.2 1.0 137 chrX 9988504 intergenic not near genes chrX 9988572 intergenic not near genes chrX 9988641 intergenic not near genes chrX_4_9985001 chrX_9985001 RAL-908 2658 chrX 10138197 10138239 chrX 10145721 10145763 412 6 7523 3.0 0.0 1.5 2.4 7566 chrX 10138197 intron,intron RhoU +,CR44894 - chrX 10141980 intron,intron RhoU +,CR44894 - chrX 10145763 intron,intron RhoU +,CR44894 - chrX_6_10140001 chrX_10140001 RAL-908 2659 chrX 10154281 10154311 chrX 10154377 10154407 8 96 2.0 3.0 2.5 2.3 126 chrX 10154281 intron,intron CR44894 -,CG12645 + chrX 10154344 intron,intron CR44894 -,CG12645 + chrX 10154407 intron,exon CR44894 -,CG12645 + chrX_8_10150001 chrX_10150001 RAL-908 2660 chrX 10216838 10216849 chrX 10216928 10216949 4 94 6.5 5.5 6.0 0.6 111 chrX 10216838 3` UTR l(1)G0230 + chrX 10216894 3` UTR l(1)G0230 + chrX 10216949 3` UTR l(1)G0230 + chrX_4_10215001 chrX_10215001 RAL-908 2661 chrX 10217594 10217607 chrX 10217668 10217703 5 87 3.5 4.5 4.0 1.0 109 chrX 10217594 intergenic l(1)G0230 +,CG15308 -,CR45629 + chrX 10217648 intergenic l(1)G0230 +,CG15308 -,CR45629 + chrX 10217703 intergenic CG15308 -,l(1)G0230 +,CR45629 + chrX_5_10215001 chrX_10215001 RAL-908 2662 chrX 10267295 10267322 chrX 10276464 10276492 roo 6 9170 0.0 7.0 3.5 1.3 9197 chrX 10267295 3` UTR alpha-Man-I - chrX 10271894 intron alpha-Man-I - chrX 10276492 3` UTR alpha-Man-I - chrX_6_10270001 chrX_10270001 RAL-908 2663 chrX 10317538 10317582 chrX 10317636 10317680 16 98 0.5 3.0 1.8 5.7 142 chrX 10317538 intron alpha-Man-I - chrX 10317609 intron alpha-Man-I - chrX 10317680 intron alpha-Man-I - chrX_16_10315001 chrX_10315001 RAL-908 2664 chrX 10348789 10348830 chrX 10356368 10356395 springer 20 7582 5.0 4.0 4.5 3.6 7606 chrX 10348789 intergenic snoRNA:U3:9B + chrX 10352592 intergenic not near genes chrX 10356395 intergenic l(1)G0289 - chrX_20_10350001 chrX_10350001 RAL-908 2665 chrX 10523993 10524042 chrX 10524152 10524200 7 159 0.5 3.0 1.8 2.5 207 chrX 10523993 intron spri - chrX 10524096 intron spri - chrX 10524200 intron spri - chrX_7_10520001 chrX_10520001 RAL-908 2666 chrX 10525051 10525076 chrX 10532135 10532164 297 4 7088 6.0 3.5 4.8 0.7 7113 chrX 10525051 intron spri - chrX 10528608 intron spri - chrX 10532164 intron spri - chrX_4_10525001 chrX_10525001 RAL-908 2667 chrX 10550313 10550367 chrX 10550411 10550465 18 97 3.0 5.0 4.0 3.6 152 chrX 10550313 intron spri - chrX 10550389 intron spri - chrX 10550465 intron spri - chrX_18_10550001 chrX_10550001 RAL-908 2668 chrX 10666431 10666471 chrX 10666618 10666658 10 186 2.5 4.5 3.5 2.2 227 chrX 10666431 intron X11Lbeta + chrX 10666544 intron X11Lbeta + chrX 10666658 intron X11Lbeta + chrX_10_10665001 chrX_10665001 RAL-908 2669 chrX 10686050 10686082 chrX 10691207 10691239 roo 4 5157 8.0 2.5 5.2 0.6 5189 chrX 10686050 intron X11Lbeta + chrX 10688644 intron X11Lbeta + chrX 10691239 intron X11Lbeta + chrX_4_10685001 chrX_10685001 RAL-908 2670 chrX 10899806 10899842 chrX 10899915 10899951 10 107 4.0 5.5 4.8 1.7 145 chrX 10899806 intergenic CG15208 + chrX 10899878 intergenic CG15208 + chrX 10899951 intergenic CG15208 + chrX_10_10895001 chrX_10895001 RAL-908 2671 chrX 11069146 11069164 chrX 11069309 11069327 9 163 4.0 3.5 3.8 1.9 181 chrX 11069146 intergenic not near genes chrX 11069236 intergenic not near genes chrX 11069327 intergenic not near genes chrX_9_11065001 chrX_11065001 RAL-908 2672 chrX 11069166 11069184 chrX 11069308 11069331 7 157 2.5 3.0 2.8 1.8 165 chrX 11069166 intergenic not near genes chrX 11069248 intergenic not near genes chrX 11069331 intergenic not near genes chrX_7_11065001 chrX_11065001 RAL-908 2673 chrX 11095981 11096026 chrX 11103103 11103143 HMS-Beagle 13 7122 8.5 3.5 6.0 1.9 7162 chrX 11095981 intergenic not near genes chrX 11099562 intergenic not near genes chrX 11103143 intron CG42249 + chrX_13_11095001 chrX_11095001 RAL-908 2674 chrX 11109416 11109418 chrX 12946233 12946234 29 1836817 19.0 17.0 18.0 1.5 1836818 chrX 11109416 intron Hsp60 + chrX 12027825 exon Usp7 - chrX 12946234 3` UTR fne + chrX_29_12025001 chrX_12025001 RAL-908 2675 chrX 11184232 11184281 chrX 11189328 11189372 flea 14 5096 2.5 3.0 2.8 3.7 5140 chrX 11184232 intergenic not near genes chrX 11186802 intergenic not near genes chrX 11189372 intergenic not near genes chrX_14_11185001 chrX_11185001 RAL-908 2676 chrX 11205144 11205190 chrX 11205244 11205290 11 99 2.5 2.5 2.5 3.1 146 chrX 11205144 intergenic not near genes chrX 11205217 intergenic not near genes chrX 11205290 intergenic not near genes chrX_11_11205001 chrX_11205001 RAL-908 2677 chrX 11235534 11235574 chrX 11235935 11235975 5 401 2.0 2.0 2.0 1.7 441 chrX 11235534 intron CG44422 - chrX 11235754 intron CG44422 - chrX 11235975 intron CG44422 - chrX_5_11235001 chrX_11235001 RAL-908 2678 chrX 11312042 11312082 chrX 11319413 11319444 Stalker2 5 7367 2.0 1.5 1.8 1.8 7402 chrX 11312042 intergenic not near genes chrX 11315743 intergenic not near genes chrX 11319444 intergenic not near genes chrX_5_11315001 chrX_11315001 RAL-908 2679 chrX 11431609 11431623 chrX 11431716 11431730 4 107 0.0 4.5 2.2 1.2 121 chrX 11431609 3` UTR Evi5 - chrX 11431670 3` UTR Evi5 - chrX 11431730 3` UTR Evi5 - chrX_4_11430001 chrX_11430001 RAL-908 2680 chrX 11633395 11633444 chrX 11640469 11640518 297 14 7074 3.0 7.5 5.2 2.3 7123 chrX 11633395 intron Ptp10D + chrX 11636956 intron Ptp10D + chrX 11640518 intron Ptp10D + chrX_14_11635001 chrX_11635001 RAL-908 2681 chrX 11645090 11645130 chrX 11648279 11648320 NOF 11 3188 4.0 4.0 4.0 2.2 3230 chrX 11645090 intron Ptp10D + chrX 11646705 intron Ptp10D + chrX 11648320 intron Ptp10D + chrX_11_11645001 chrX_11645001 RAL-908 2682 chrX 11719854 11719898 chrX 11719954 11719998 8 100 6.5 3.5 5.0 1.3 144 chrX 11719854 3` UTR prtp + chrX 11719926 intergenic prtp +,Tango10 + chrX 11719998 intergenic prtp +,Tango10 + chrX_8_11715001 chrX_11715001 RAL-908 2683 chrX 11799003 11799037 chrX 11799109 11799143 12 102 6.0 4.0 5.0 2.0 140 chrX 11799003 intron CkIIbeta + chrX 11799073 intron CkIIbeta + chrX 11799143 intron CkIIbeta + chrX_12_11795001 chrX_11795001 RAL-908 2684 chrX 11804661 11804690 chrX 11804785 11804814 5 124 3.5 1.0 2.2 1.6 153 chrX 11804661 intron Hsc70-3 - chrX 11804738 intron Hsc70-3 - chrX 11804814 intron Hsc70-3 - chrX_5_11800001 chrX_11800001 RAL-908 2685 chrX 11839007 11839052 chrX 11839282 11839290 12 265 0.0 1.0 0.5 8.0 283 chrX 11839007 intergenic not near genes chrX 11839148 intergenic Cyp28c1 + chrX 11839290 intergenic Cyp28c1 + chrX_12_11835001 chrX_11835001 RAL-908 2686 chrX 11936555 11936577 chrX 11936674 11936696 4 119 0.0 3.0 1.5 1.6 141 chrX 11936555 intron cac - chrX 11936626 intron cac - chrX 11936696 exon cac - chrX_4_11935001 chrX_11935001 RAL-908 2687 chrX 12038074 12038113 chrX 12038288 12038327 10 213 2.5 5.0 3.8 2.1 253 chrX 12038074 intergenic not near genes chrX 12038200 intergenic not near genes chrX 12038327 intergenic not near genes chrX_10_12035001 chrX_12035001 RAL-908 2688 chrX 12094015 12094061 chrX 12094127 12094151 14 106 2.0 2.5 2.2 4.4 136 chrX 12094015 intron,intron CR43960 +,Ten-a + chrX 12094083 intron,intron CR43960 +,Ten-a + chrX 12094151 intron,intron CR43960 +,Ten-a + chrX_14_12090001 chrX_12090001 RAL-908 2689 chrX 12168123 12168144 chrX 12173585 12173604 I-element 5 5460 2.5 1.0 1.8 1.8 5481 chrX 12168123 intron Ten-a + chrX 12170864 intron Ten-a + chrX 12173604 intron Ten-a + chrX_5_12170001 chrX_12170001 RAL-908 2690 chrX 12176720 12176769 chrX 12176816 12176865 5 93 1.0 2.5 1.8 1.8 145 chrX 12176720 intron,3` UTR Ten-a +,CG1924 - chrX 12176792 intron,3` UTR Ten-a +,CG1924 - chrX 12176865 intron,3` UTR Ten-a +,CG1924 - chrX_5_12175001 chrX_12175001 RAL-908 2691 chrX 12246955 12246987 chrX 12247063 12247080 4 104 2.0 4.5 3.2 1.0 125 chrX 12246955 intron Ten-a + chrX 12247018 intron Ten-a + chrX 12247080 intron Ten-a + chrX_4_12245001 chrX_12245001 RAL-908 2692 chrX 12248738 12248777 chrX 12248850 12248879 8 107 2.0 4.5 3.2 1.9 141 chrX 12248738 intron Ten-a + chrX 12248808 intron Ten-a + chrX 12248879 intron Ten-a + chrX_8_12245001 chrX_12245001 RAL-908 2693 chrX 12272825 12272870 chrX 12272924 12272969 15 99 3.0 2.5 2.8 3.9 144 chrX 12272825 intron Ten-a + chrX 12272897 intron Ten-a + chrX 12272969 intron Ten-a + chrX_15_12270001 chrX_12270001 RAL-908 2694 chrX 12295308 12295330 chrX 12295404 12295426 7 96 2.5 3.0 2.8 1.8 118 chrX 12295308 exon Ten-a + chrX 12295367 intron Ten-a + chrX 12295426 intron Ten-a + chrX_7_12295001 chrX_12295001 RAL-908 2695 chrX 12350752 12350798 chrX 12350853 12350894 10 99 4.0 0.0 2.0 3.3 142 chrX 12350752 intergenic not near genes chrX 12350823 intergenic not near genes chrX 12350894 intergenic not near genes chrX_10_12350001 chrX_12350001 RAL-908 2696 chrX 12356990 12357039 chrX 12357166 12357215 15 174 1.0 0.5 0.8 8.3 225 chrX 12356990 intergenic not near genes chrX 12357102 intergenic not near genes chrX 12357215 intergenic not near genes chrX_15_12355001 chrX_12355001 RAL-908 2697 chrX 12381844 12381901 chrX 12385777 12385823 flea 7 3925 0.0 5.5 2.8 1.8 3979 chrX 12381844 intergenic not near genes chrX 12383834 intergenic not near genes chrX 12385823 intergenic not near genes chrX_7_12380001 chrX_12380001 RAL-908 2698 chrX 12528845 12528859 chrX 12528941 12528955 4 96 8.5 0.5 4.5 0.7 110 chrX 12528845 intron CG43921 - chrX 12528900 intron CG43921 - chrX 12528955 intron CG43921 - chrX_4_12525001 chrX_12525001 RAL-908 2699 chrX 12537269 12537568 chrX 12537386 12537664 5 104 0.0 0.0 0.0 5.0 395 chrX 12537269 intron CG43921 - chrX 12537466 intron CG43921 - chrX 12537664 intron CG43921 - chrX_5_12535001 chrX_12535001 RAL-908 2700 chrX 12785405 12785441 chrX 12785502 12785538 15 97 5.0 5.5 5.2 2.4 133 chrX 12785405 intergenic Pde9 -,CG32647 - chrX 12785472 intergenic Pde9 - chrX 12785538 intergenic Pde9 - chrX_15_12785001 chrX_12785001 RAL-908 2701 chrX 12823191 12823229 chrX 12823282 12823326 8 96 2.5 1.5 2.0 2.7 135 chrX 12823191 intron Pde9 - chrX 12823258 intron Pde9 - chrX 12823326 intron Pde9 - chrX_8_12820001 chrX_12820001 RAL-908 2702 chrX 12930585 12930608 chrX 12937721 12937741 HMS-Beagle 5 7135 5.0 9.0 7.0 0.6 7156 chrX 12930585 intron fne + chrX 12934163 intron fne + chrX 12937741 intron fne + chrX_5_12930001 chrX_12930001 RAL-908 2703 chrX 11109417 11109417 chrX 12946233 12946233 9 1836816 19.0 17.0 18.0 0.5 1836816 chrX 11109417 intron Hsp60 + chrX 12027825 exon Usp7 - chrX 12946233 3` UTR fne + chrX_9_12025001 chrX_12025001 RAL-908 2704 chrX 8810799 8810799 chrX 12946234 12946234 4 4135435 13.0 17.0 15.0 0.2 4135435 chrX 8810799 intergenic not near genes chrX 10878516 exon Ork1 - chrX 12946234 3` UTR fne + chrX_4_10875001 chrX_10875001 RAL-908 2705 chrX 11109417 11109417 chrX 12946234 12946234 10 1836817 19.0 17.0 18.0 0.5 1836817 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946234 3` UTR fne + chrX_10_12025001 chrX_12025001 RAL-908 2706 chrX 12946234 12946234 chrX 18572524 18572526 4 5626291 17.0 19.5 18.2 0.2 5626292 chrX 12946234 3` UTR fne + chrX 15759380 intron Graf - chrX 18572526 intergenic not near genes chrX_4_15755001 chrX_15755001 RAL-908 2707 chrX 11109414 11109417 chrX 12946235 12946235 15 1836818 19.0 17.0 18.0 0.8 1836821 chrX 11109414 intron Hsp60 + chrX 12027824 exon Usp7 - chrX 12946235 3` UTR fne + chrX_15_12025001 chrX_12025001 RAL-908 2708 chrX 12946235 12946235 chrX 18572524 18572526 7 5626291 17.0 19.5 18.2 0.4 5626291 chrX 12946235 3` UTR fne + chrX 15759380 intron Graf - chrX 18572526 intergenic not near genes chrX_7_15755001 chrX_15755001 RAL-908 2709 chrX 12971668 12971721 chrX 12971765 12971767 5 86 2.5 0.5 1.5 2.0 99 chrX 12971668 intron,exon CR43636 -,CG15721 + chrX 12971718 intron,exon CR43636 -,CG15721 + chrX 12971767 intron,exon CR43636 -,CG15721 + chrX_5_12970001 chrX_12970001 RAL-908 2710 chrX 12977051 12977063 chrX 12977147 12977159 6 96 1.5 7.0 4.2 1.2 108 chrX 12977051 intergenic not near genes chrX 12977105 intergenic not near genes chrX 12977159 intergenic not near genes chrX_6_12975001 chrX_12975001 RAL-908 2711 chrX 12985966 12986003 chrX 12986082 12986119 9 114 2.5 3.5 3.0 2.2 153 chrX 12985966 intergenic not near genes chrX 12986042 intergenic not near genes chrX 12986119 intergenic not near genes chrX_9_12985001 chrX_12985001 RAL-908 2712 chrX 13099108 13099137 chrX 13099216 13099250 5 112 0.0 5.5 2.8 1.3 142 chrX 13099108 intron CG43313 - chrX 13099179 intron CG43313 - chrX 13099250 intron CG43313 - chrX_5_13095001 chrX_13095001 RAL-908 2713 chrX 13146576 13146631 chrX 13146684 13146739 11 107 4.5 0.0 2.2 3.4 163 chrX 13146576 intron CG32645 + chrX 13146658 intron CG32645 + chrX 13146739 intron CG32645 + chrX_11_13145001 chrX_13145001 RAL-908 2714 chrX 13225889 13225925 chrX 13226008 13226044 8 119 2.0 2.5 2.2 2.5 155 chrX 13225889 intron mew - chrX 13225966 intron mew - chrX 13226044 intron mew - chrX_8_13225001 chrX_13225001 RAL-908 2715 chrX 13329304 13329314 chrX 13329418 13329428 4 114 3.0 5.5 4.2 0.8 124 chrX 13329304 intergenic IP3K2 + chrX 13329366 intergenic IP3K2 +,Jafrac1 + chrX 13329428 intergenic IP3K2 +,Jafrac1 + chrX_4_13325001 chrX_13325001 RAL-908 2716 chrX 13374822 13374869 chrX 13374922 13374959 14 98 3.0 4.5 3.8 2.9 137 chrX 13374822 intron CG1640 + chrX 13374890 intron CG1640 + chrX 13374959 intron CG1640 + chrX_14_13370001 chrX_13370001 RAL-908 2717 chrX 13401468 13401518 chrX 13401840 13401890 jockey 5 372 2.0 7.0 4.5 0.9 422 chrX 13401468 intergenic CG1673 +,CG12725 - chrX 13401679 intergenic CG12725 -,CG1673 + chrX 13401890 3` UTR CG12725 - chrX_5_13400001 chrX_13400001 RAL-908 2718 chrX 13429473 13429491 chrX 13430642 13430660 jockey 6 1169 0.0 7.5 3.8 1.2 1187 chrX 13429473 intergenic not near genes chrX 13430066 intergenic not near genes chrX 13430660 intergenic not near genes chrX_6_13430001 chrX_13430001 RAL-908 2719 chrX 13442120 13442169 chrX 13442231 13442280 9 109 0.0 3.5 1.8 3.2 160 chrX 13442120 intergenic not near genes chrX 13442200 intergenic not near genes chrX 13442280 intergenic not near genes chrX_9_13440001 chrX_13440001 RAL-908 2720 chrX 13463637 13463675 chrX 13469221 13469262 mdg3 16 5596 7.0 4.0 5.5 2.5 5625 chrX 13463637 intron Neto + chrX 13466450 intron Neto + chrX 13469262 intron Neto + chrX_16_13465001 chrX_13465001 RAL-908 2721 chrX 13489579 13489593 chrX 13490120 13490134 4 541 1.5 5.0 3.2 1.0 555 chrX 13489579 intron Neto + chrX 13489856 intron Neto + chrX 13490134 intron Neto + chrX_4_13485001 chrX_13485001 RAL-908 2722 chrX 13777505 13777700 chrX 13777611 13777817 12 112 5.5 3.0 4.2 2.3 312 chrX 13777505 3` UTR rdgB + chrX 13777661 3` UTR rdgB + chrX 13777817 3` UTR rdgB + chrX_12_13775001 chrX_13775001 RAL-908 2723 chrX 13794595 13794644 chrX 13794744 13794794 6 150 1.0 2.0 1.5 2.4 199 chrX 13794595 intron inaE + chrX 13794694 intron inaE + chrX 13794794 intron inaE + chrX_6_13790001 chrX_13790001 RAL-908 2724 chrX 13795500 13795512 chrX 13798814 13798826 7 3314 14.5 9.5 12.0 0.5 3326 chrX 13795500 intron inaE + chrX 13797163 intron,exon inaE +,CG10996 - chrX 13798826 intron inaE + chrX_7_13795001 chrX_13795001 RAL-908 2725 chrX 13796037 13796054 chrX 13799580 13799597 4 3544 0.0 20.0 10.0 0.4 3560 chrX 13796037 intron inaE + chrX 13797817 intron inaE + chrX 13799597 intron inaE + chrX_4_13795001 chrX_13795001 RAL-908 2726 chrX 13875960 13875973 chrX 13876064 13876077 4 104 4.0 0.5 2.2 1.2 117 chrX 13875960 intron mamo - chrX 13876018 intron mamo - chrX 13876077 intron mamo - chrX_4_13875001 chrX_13875001 RAL-908 2727 chrX 13934280 13934317 chrX 13934383 13934420 7 103 1.5 3.5 2.5 2.0 140 chrX 13934280 intron mamo - chrX 13934350 intron mamo - chrX 13934420 intron mamo - chrX_7_13930001 chrX_13930001 RAL-908 2728 chrX 13935502 13935507 chrX 13935600 13935610 5 101 5.5 9.0 7.2 0.6 108 chrX 13935502 intron mamo - chrX 13935556 intron mamo - chrX 13935610 intron mamo - chrX_5_13935001 chrX_13935001 RAL-908 2729 chrX 13937973 13937997 chrX 13941264 13941285 I-element 6 3290 3.5 4.5 4.0 1.2 3312 chrX 13937973 intron mamo - chrX 13939629 intron mamo - chrX 13941285 intron mamo - chrX_6_13935001 chrX_13935001 RAL-908 2730 chrX 13057303 13057304 chrX 13966949 13966949 4 909645 17.0 8.0 12.5 0.3 909646 chrX 13057303 intron rad + chrX 13512126 intron Neto + chrX 13966949 intron mamo - chrX_4_13510001 chrX_13510001 RAL-908 2731 chrX 13975875 13975904 chrX 13975972 13976001 6 97 0.0 4.0 2.0 2.0 126 chrX 13975875 intron mamo - chrX 13975938 intron mamo - chrX 13976001 intron mamo - chrX_6_13975001 chrX_13975001 RAL-908 2732 chrX 14064138 14064165 chrX 14064249 14064282 9 116 0.0 1.0 0.5 6.0 144 chrX 14064138 intergenic not near genes chrX 14064210 intergenic not near genes chrX 14064282 intergenic not near genes chrX_9_14060001 chrX_14060001 RAL-908 2733 chrX 14105004 14105052 chrX 14114175 14114223 roo 10 9170 3.5 3.5 3.5 2.2 9219 chrX 14105004 intergenic not near genes chrX 14109614 intergenic not near genes chrX 14114223 5` UTR CR44657 + chrX_10_14105001 chrX_14105001 RAL-908 2734 chrX 14131477 14131524 chrX 14131578 14131598 6 88 0.0 2.5 1.2 2.7 121 chrX 14131477 intergenic not near genes chrX 14131538 intergenic not near genes chrX 14131598 intergenic not near genes chrX_6_14130001 chrX_14130001 RAL-908 2735 chrX 14157581 14157614 chrX 14163258 14163274 297 4 5670 5.0 6.5 5.8 0.6 5693 chrX 14157581 intergenic not near genes chrX 14160428 intergenic not near genes chrX 14163274 intergenic not near genes chrX_4_14160001 chrX_14160001 RAL-908 2736 chrX 14167388 14167435 chrX 14167503 14167550 13 113 3.0 6.0 4.5 2.4 162 chrX 14167388 intergenic not near genes chrX 14167469 intergenic not near genes chrX 14167550 intergenic not near genes chrX_13_14165001 chrX_14165001 RAL-908 2737 chrX 14312761 14312806 chrX 14312857 14312892 8 95 1.0 1.0 1.0 4.0 131 chrX 14312761 intergenic not near genes chrX 14312826 intergenic not near genes chrX 14312892 intergenic not near genes chrX_8_14310001 chrX_14310001 RAL-908 2738 chrX 14323228 14323267 chrX 14323654 14323693 8 425 4.0 1.0 2.5 2.3 465 chrX 14323228 intron dpr8 + chrX 14323460 intron dpr8 + chrX 14323693 intron dpr8 + chrX_8_14320001 chrX_14320001 RAL-908 2739 chrX 14381395 14381407 chrX 14381569 14381581 6 173 2.5 3.0 2.8 1.6 186 chrX 14381395 intron,3` UTR dpr8 +,betaNACtes4 + chrX 14381488 intron dpr8 + chrX 14381581 intron dpr8 + chrX_6_14380001 chrX_14380001 RAL-908 2740 chrX 14401558 14401574 chrX 14401686 14401702 7 128 2.5 2.5 2.5 2.0 144 chrX 14401558 intron dpr8 + chrX 14401630 intron dpr8 + chrX 14401702 intron dpr8 + chrX_7_14400001 chrX_14400001 RAL-908 2741 chrX 14404995 14405025 chrX 14405093 14405123 5 98 5.0 2.5 3.8 1.0 128 chrX 14404995 intron dpr8 + chrX 14405059 intron dpr8 + chrX 14405123 intron dpr8 + chrX_5_14405001 chrX_14405001 RAL-908 2742 chrX 14416291 14416325 chrX 14421078 14421112 F-element 9 4787 5.0 2.0 3.5 2.0 4821 chrX 14416291 intron dpr8 + chrX 14418702 intron dpr8 + chrX 14421112 intron dpr8 + chrX_9_14415001 chrX_14415001 RAL-908 2743 chrX 14484949 14484985 chrX 14485058 14485094 7 109 0.0 2.5 1.2 3.2 145 chrX 14484949 intergenic not near genes chrX 14485022 intergenic not near genes chrX 14485094 intergenic not near genes chrX_7_14485001 chrX_14485001 RAL-908 2744 chrX 14636463 14636489 chrX 14641913 14641950 I-element 6 5459 2.0 6.0 4.0 1.2 5487 chrX 14636463 intron NetA - chrX 14639206 intron NetA - chrX 14641950 intron NetA - chrX_6_14635001 chrX_14635001 RAL-908 2745 chrX 14714026 14714064 chrX 14714128 14714166 6 102 2.5 4.0 3.2 1.4 140 chrX 14714026 intron NetB - chrX 14714096 intron NetB - chrX 14714166 intron NetB - chrX_6_14710001 chrX_14710001 RAL-908 2746 chrX 14767937 14767976 chrX 14768037 14768076 5 100 3.0 0.0 1.5 2.0 139 chrX 14767937 intergenic not near genes chrX 14768006 intergenic not near genes chrX 14768076 intergenic not near genes chrX_5_14765001 chrX_14765001 RAL-908 2747 chrX 14778022 14778041 chrX 14782839 14782858 Doc 4 4817 4.5 4.0 4.2 0.8 4836 chrX 14778022 intergenic CG5347 + chrX 14780440 intergenic not near genes chrX 14782858 intergenic Ag5r2 - chrX_4_14780001 chrX_14780001 RAL-908 2748 chrX 14809553 14809598 chrX 14809660 14809705 14 103 3.5 2.5 3.0 3.5 152 chrX 14809553 intron rut - chrX 14809629 intron rut - chrX 14809705 intron rut - chrX_14_14805001 chrX_14805001 RAL-908 2749 chrX 14818773 14818797 chrX 14823976 14824018 copia 7 5216 3.5 4.5 4.0 1.4 5245 chrX 14818773 intron rut - chrX 14821396 intron rut - chrX 14824018 intron rut - chrX_7_14820001 chrX_14820001 RAL-908 2750 chrX 14861932 14861961 chrX 14862126 14862165 9 196 27.0 26.5 26.8 0.3 233 chrX 14861932 intron Flo2 + chrX 14862048 intron Flo2 + chrX 14862165 intron Flo2 + chrX_9_14860001 chrX_14860001 RAL-908 2751 chrX 14890450 14890480 chrX 14890546 14890576 6 96 2.5 0.5 1.5 2.4 126 chrX 14890450 intron,intron Flo2 +,CG9514 - chrX 14890513 intron,intron Flo2 +,CG9514 - chrX 14890576 intron,intron Flo2 +,CG9514 - chrX_6_14890001 chrX_14890001 RAL-908 2752 chrX 14900835 14900880 chrX 14901046 14901092 5 211 4.5 3.5 4.0 1.0 257 chrX 14900835 intron Flo2 + chrX 14900964 intron Flo2 + chrX 14901092 intron Flo2 + chrX_5_14900001 chrX_14900001 RAL-908 2753 chrX 14936839 14936889 chrX 14946116 14946166 roo 12 9277 3.0 5.0 4.0 2.4 9327 chrX 14936839 intron pdgy - chrX 14941502 intron pdgy - chrX 14946166 intron pdgy - chrX_12_14940001 chrX_14940001 RAL-908 2754 chrX 15059154 15059207 chrX 15059280 15059333 5 126 0.5 2.5 1.5 2.0 179 chrX 15059154 exon hiw - chrX 15059244 intron hiw - chrX 15059333 intron hiw - chrX_5_15055001 chrX_15055001 RAL-908 2755 chrX 15127218 15127236 chrX 15127330 15127342 7 110 4.0 5.5 4.8 1.2 124 chrX 15127218 intron drd + chrX 15127280 intron drd + chrX 15127342 intron drd + chrX_7_15125001 chrX_15125001 RAL-908 2756 chrX 15271279 15271304 chrX 15271374 15271416 7 101 0.5 2.5 1.5 2.8 137 chrX 15271279 3` UTR CG9106 - chrX 15271348 3` UTR CG9106 - chrX 15271416 exon CG9106 - chrX_7_15270001 chrX_15270001 RAL-908 2757 chrX 15413050 15413077 chrX 15417370 15417399 Juan 9 4318 3.0 6.0 4.5 1.6 4349 chrX 15413050 intron Cngl - chrX 15415224 intron Cngl - chrX 15417399 intron Cngl - chrX_9_15415001 chrX_15415001 RAL-908 2758 chrX 15543288 15543297 chrX 15543344 15543388 5 74 0.5 1.5 1.0 2.5 100 chrX 15543288 intron Ac13E - chrX 15543338 intron Ac13E - chrX 15543388 intron Ac13E - chrX_5_15540001 chrX_15540001 RAL-908 2759 chrX 4275590 4275590 chrX 15627327 15627327 6 11351737 4.0 16.0 10.0 0.5 11351737 chrX 4275590 3` UTR CR45483 - chrX 9951458 intergenic not near genes chrX 15627327 intron sog - chrX_6_9950001 chrX_9950001 RAL-908 2760 chrX 15678015 15678060 chrX 15678113 15678157 5 92 2.0 3.5 2.8 1.3 142 chrX 15678015 intergenic CG12708 + chrX 15678086 intergenic CG12708 + chrX 15678157 intergenic CG12708 + chrX_5_15675001 chrX_15675001 RAL-908 2761 chrX 15818769 15818805 chrX 15818850 15818901 11 94 5.5 5.5 5.5 1.7 132 chrX 15818769 intron sd + chrX 15818835 intron sd + chrX 15818901 intron sd + chrX_11_15815001 chrX_15815001 RAL-908 2762 chrX 15898422 15898446 chrX 15898596 15898619 8 174 7.5 2.0 4.8 1.4 197 chrX 15898422 intron shi + chrX 15898520 intron shi + chrX 15898619 intron shi + chrX_8_15895001 chrX_15895001 RAL-908 2763 chrX 15912145 15912187 chrX 15912326 15912367 11 179 2.5 1.5 2.0 3.7 222 chrX 15912145 intron CG8909 + chrX 15912256 intron CG8909 + chrX 15912367 intron CG8909 + chrX_11_15910001 chrX_15910001 RAL-908 2764 chrX 16100539 16100588 chrX 16100638 16100688 9 96 6.0 2.0 4.0 1.8 149 chrX 16100539 intron,intron CG42353 -,CG42354 - chrX 16100614 intron,intron CG42353 -,CG42354 - chrX 16100688 intron,intron CG42353 -,CG42354 - chrX_9_16100001 chrX_16100001 RAL-908 2765 chrX 16140123 16140157 chrX 16140226 16140260 11 103 5.0 5.5 5.2 1.8 137 chrX 16140123 intron disco-r - chrX 16140192 intron disco-r - chrX 16140260 intron disco-r - chrX_11_16140001 chrX_16140001 RAL-908 2766 chrX 16194991 16195026 chrX 16195097 16195132 10 106 4.0 3.5 3.8 2.1 141 chrX 16194991 intergenic not near genes chrX 16195062 intergenic not near genes chrX 16195132 intergenic not near genes chrX_10_16195001 chrX_16195001 RAL-908 2767 chrX 16222761 16222807 chrX 16231131 16231177 roo 15 8368 2.5 5.5 4.0 3.0 8416 chrX 16222761 intergenic not near genes chrX 16226969 intergenic not near genes chrX 16231177 intergenic not near genes chrX_15_16225001 chrX_16225001 RAL-908 2768 chrX 16295507 16295532 chrX 16295611 16295636 4 104 8.5 0.0 4.2 0.8 129 chrX 16295507 intron CG9911 - chrX 16295572 intron CG9911 - chrX 16295636 intron CG9911 - chrX_4_16295001 chrX_16295001 RAL-908 2769 chrX 16340648 16340697 chrX 16349825 16349850 roo 15 9175 2.0 2.5 2.2 4.7 9202 chrX 16340648 intergenic Dsp1 + chrX 16345249 intergenic not near genes chrX 16349850 intergenic sl + chrX_15_16345001 chrX_16345001 RAL-908 2770 chrX 16492627 16492675 chrX 16498224 16498272 mdg3 13 5597 4.5 4.0 4.2 2.5 5645 chrX 16492627 intron para - chrX 16495450 intron para - chrX 16498272 exon para - chrX_13_16495001 chrX_16495001 RAL-908 2771 chrX 16573108 16573128 chrX 16573205 16573225 5 95 3.0 0.5 1.8 1.8 117 chrX 16573108 intron CanA-14F - chrX 16573166 intron CanA-14F - chrX 16573225 intron CanA-14F - chrX_5_16570001 chrX_16570001 RAL-908 2772 chrX 16623465 16623484 chrX 16623571 16623583 6 105 6.0 0.0 3.0 1.5 118 chrX 16623465 intergenic not near genes chrX 16623524 intergenic Rok - chrX 16623583 intergenic Rok - chrX_6_16620001 chrX_16620001 RAL-908 2773 chrX 16678051 16678095 chrX 16678147 16678191 12 96 3.0 5.5 4.2 2.3 140 chrX 16678051 intergenic CG13010 - chrX 16678121 intergenic CG13010 - chrX 16678191 intergenic CG13010 - chrX_12_16675001 chrX_16675001 RAL-908 2774 chrX 16764720 16764734 chrX 16764816 16764831 5 97 4.5 3.5 4.0 1.0 111 chrX 16764720 intron if - chrX 16764776 intron if - chrX 16764831 intron if - chrX_5_16760001 chrX_16760001 RAL-908 2775 chrX 16785255 16785300 chrX 16785379 16785424 12 124 2.5 2.0 2.2 3.8 169 chrX 16785255 3` UTR CG9609 - chrX 16785340 3` UTR CG9609 - chrX 16785424 3` UTR CG9609 - chrX_12_16785001 chrX_16785001 RAL-908 2776 chrX 16936008 16936031 chrX 16936446 16936469 jockey 5 438 0.0 5.5 2.8 1.3 461 chrX 16936008 intron CG4928 + chrX 16936238 intron CG4928 + chrX 16936469 intron CG4928 + chrX_5_16935001 chrX_16935001 RAL-908 2777 chrX 16943677 16943720 chrX 16943781 16943824 7 104 1.0 4.0 2.5 2.0 147 chrX 16943677 5` UTR RhoGAP15B + chrX 16943750 5` UTR RhoGAP15B + chrX 16943824 5` UTR RhoGAP15B + chrX_7_16940001 chrX_16940001 RAL-908 2778 chrX 1053117 1053123 chrX 16983076 16983076 5 15929955 12.5 6.0 9.2 0.5 15929959 chrX 1053117 intron CR44779 + chrX 9018096 intron,intron rdgA +,CR43836 - chrX 16983076 intron CG45002 - chrX_5_9015001 chrX_9015001 RAL-908 2779 chrX 1053118 1053123 chrX 16983077 16983077 5 15929957 12.5 6.0 9.2 0.5 15929959 chrX 1053118 intron CR44779 + chrX 9018098 intron,intron rdgA +,CR43836 - chrX 16983077 intron CG45002 - chrX_5_9015001 chrX_9015001 RAL-908 2780 chrX 17011702 17012000 chrX 17011855 17012056 8 110 1.0 1.5 1.2 3.6 354 chrX 17011702 intron CG45002 - chrX 17011879 intron CG45002 - chrX 17012056 intron CG45002 - chrX_8_17010001 chrX_17010001 RAL-908 2781 chrX 17057918 17057958 chrX 17058179 17058219 pogo 8 261 3.5 3.5 3.5 1.8 301 chrX 17057918 intron CG45002 - chrX 17058068 intron CG45002 - chrX 17058219 intron CG45002 - chrX_8_17055001 chrX_17055001 RAL-908 2782 chrX 17195192 17195234 chrX 17200297 17200339 flea 12 5104 5.0 4.5 4.8 2.1 5147 chrX 17195192 3` UTR baz + chrX 17197766 3` UTR baz + chrX 17200339 3` UTR baz + chrX_12_17195001 chrX_17195001 RAL-908 2783 chrX 17205831 17205850 chrX 17205940 17205960 9 110 5.5 5.5 5.5 1.4 129 chrX 17205831 intergenic not near genes chrX 17205896 intergenic not near genes chrX 17205960 intergenic CG32564 + chrX_9_17205001 chrX_17205001 RAL-908 2784 chrX 17234240 17234285 chrX 17234354 17234362 6 99 1.5 0.0 0.8 3.3 122 chrX 17234240 intron f + chrX 17234301 intron f + chrX 17234362 intron f + chrX_6_17230001 chrX_17230001 RAL-908 2785 chrX 17290056 17290092 chrX 17290152 17290188 13 96 1.5 1.0 1.2 5.9 132 chrX 17290056 intron,intron CG5445 +,Fim - chrX 17290122 intron,intron CG5445 +,Fim - chrX 17290188 intron,intron CG5445 +,Fim - chrX_13_17290001 chrX_17290001 RAL-908 2786 chrX 17303590 17303605 chrX 17303686 17303701 5 96 6.0 4.5 5.2 0.8 111 chrX 17303590 intron CG5445 + chrX 17303646 intron CG5445 + chrX 17303701 intron CG5445 + chrX_5_17300001 chrX_17300001 RAL-908 2787 chrX 17316347 17316388 chrX 17316451 17316466 18 103 5.0 0.0 2.5 5.1 119 chrX 17316347 intron B-H2 + chrX 17316406 intron B-H2 + chrX 17316466 intron B-H2 + chrX_18_17315001 chrX_17315001 RAL-908 2788 chrX 17319549 17319575 chrX 17319642 17319684 6 103 4.0 2.5 3.2 1.4 135 chrX 17319549 intron B-H2 + chrX 17319616 intron B-H2 + chrX 17319684 intron B-H2 + chrX_6_17315001 chrX_17315001 RAL-908 2789 chrX 17479918 17479932 chrX 17480015 17480018 4 94 2.5 4.5 3.5 0.9 100 chrX 17479918 intron CG43658 - chrX 17479968 intron CG43658 - chrX 17480018 intron CG43658 - chrX_4_17475001 chrX_17475001 RAL-908 2790 chrX 17544986 17545025 chrX 17545088 17545110 5 99 3.0 1.0 2.0 1.7 124 chrX 17544986 intron CG43658 - chrX 17545048 intron CG43658 - chrX 17545110 intron CG43658 - chrX_5_17545001 chrX_17545001 RAL-908 2791 chrX 17685457 17685473 chrX 17685555 17685576 5 102 1.0 6.5 3.8 1.0 119 chrX 17685457 intron chas - chrX 17685516 intron chas - chrX 17685576 intron chas - chrX_5_17685001 chrX_17685001 RAL-908 2792 chrX 17708810 17708856 chrX 17708907 17708955 8 98 1.5 1.5 1.5 3.2 145 chrX 17708810 intron CG8173 - chrX 17708882 intron CG8173 - chrX 17708955 intron CG8173 - chrX_8_17705001 chrX_17705001 RAL-908 2793 chrX 17731105 17731121 chrX 17731201 17731217 7 96 4.5 6.5 5.5 1.1 112 chrX 17731105 intron CG42684 + chrX 17731161 intron CG42684 + chrX 17731217 intron CG42684 + chrX_7_17730001 chrX_17730001 RAL-908 2794 chrX 17760023 17760069 chrX 17760146 17760192 18 121 2.0 3.5 2.8 4.7 169 chrX 17760023 intergenic not near genes chrX 17760108 intergenic not near genes chrX 17760192 intergenic not near genes chrX_18_17760001 chrX_17760001 RAL-908 2795 chrX 17782201 17782239 chrX 17782319 17782357 6 118 2.5 3.5 3.0 1.5 156 chrX 17782201 intergenic not near genes chrX 17782279 intergenic not near genes chrX 17782357 intergenic not near genes chrX_6_17780001 chrX_17780001 RAL-908 2796 chrX 17792936 17792980 chrX 17796250 17796291 flea 6 3314 3.0 2.0 2.5 1.7 3355 chrX 17792936 intron OdsH + chrX 17794614 intron OdsH + chrX 17796291 intron OdsH + chrX_6_17790001 chrX_17790001 RAL-908 2797 chrX 17911834 17911878 chrX 17911942 17911986 12 108 1.0 2.0 1.5 4.8 152 chrX 17911834 intron CG6847 + chrX 17911910 intron CG6847 + chrX 17911986 intron CG6847 + chrX_12_17910001 chrX_17910001 RAL-908 2798 chrX 17958706 17958714 chrX 17959433 17959452 5 731 14.0 22.0 18.0 0.3 746 chrX 17958706 intron Sh - chrX 17959079 intron Sh - chrX 17959452 intron Sh - chrX_5_17955001 chrX_17955001 RAL-908 2799 chrX 17965690 17965737 chrX 17965787 17965834 13 96 3.0 0.0 1.5 5.2 144 chrX 17965690 intron Sh - chrX 17965762 intron Sh - chrX 17965834 intron Sh - chrX_13_17965001 chrX_17965001 RAL-908 2800 chrX 17966578 17966615 chrX 17966689 17966726 11 110 1.5 2.0 1.8 3.9 148 chrX 17966578 intron Sh - chrX 17966652 intron Sh - chrX 17966726 intron Sh - chrX_11_17965001 chrX_17965001 RAL-908 2801 chrX 17968902 17968907 chrX 17969023 17969045 4 134 4.5 4.5 4.5 0.7 143 chrX 17968902 intron Sh - chrX 17968974 intron Sh - chrX 17969045 intron Sh - chrX_4_17965001 chrX_17965001 RAL-908 2802 chrX 18040409 18040461 chrX 18040517 18040569 12 108 2.5 2.5 2.5 3.4 160 chrX 18040409 intron Sh - chrX 18040489 intron Sh - chrX 18040569 intron Sh - chrX_12_18040001 chrX_18040001 RAL-908 2803 chrX 18122810 18122848 chrX 18122906 18122944 15 95 1.5 2.5 2.0 5.0 134 chrX 18122810 5` UTR CR45606 + chrX 18122877 5` UTR CR45606 + chrX 18122944 intergenic CR45606 + chrX_15_18120001 chrX_18120001 RAL-908 2804 chrX 18127918 18127966 chrX 18128023 18128071 8 105 2.5 3.0 2.8 2.1 153 chrX 18127918 intergenic mir-210 + chrX 18127994 intergenic mir-210 + chrX 18128071 intergenic mir-210 + chrX_8_18125001 chrX_18125001 RAL-908 2805 chrX 18175474 18175478 chrX 18175579 18175583 4 105 0.0 3.5 1.8 1.4 109 chrX 18175474 intergenic not near genes chrX 18175528 intergenic not near genes chrX 18175583 intergenic not near genes chrX_4_18175001 chrX_18175001 RAL-908 2806 chrX 18194047 18194095 chrX 18194602 18194650 BS 16 554 6.0 4.5 5.2 2.6 603 chrX 18194047 intron Frq2 + chrX 18194348 intron Frq2 + chrX 18194650 intron Frq2 + chrX_16_18190001 chrX_18190001 RAL-908 2807 chrX 18218018 18218067 chrX 18218154 18218204 13 137 6.0 2.0 4.0 2.6 186 chrX 18218018 intron CG33639 - chrX 18218111 intron CG33639 - chrX 18218204 intron CG33639 - chrX_13_18215001 chrX_18215001 RAL-908 2808 chrX 18410377 18410413 chrX 18410482 18410518 18 105 3.5 3.5 3.5 4.0 141 chrX 18410377 intergenic CG32549 - chrX 18410448 intergenic CG32549 - chrX 18410518 intergenic CG32549 - chrX_18_18410001 chrX_18410001 RAL-908 2809 chrX 18411397 18411441 chrX 18411522 18411566 11 125 4.0 4.0 4.0 2.2 169 chrX 18411397 intergenic not near genes chrX 18411482 intergenic not near genes chrX 18411566 intergenic not near genes chrX_11_18410001 chrX_18410001 RAL-908 2810 chrX 18427365 18427405 chrX 18427796 18427836 5 426 3.0 4.0 3.5 1.1 471 chrX 18427365 intergenic CG42323 + chrX 18427600 intergenic not near genes chrX 18427836 intergenic not near genes chrX_5_18425001 chrX_18425001 RAL-908 2811 chrX 18429480 18429523 chrX 18434811 18434854 Transpac 6 5330 2.5 8.5 5.5 0.9 5374 chrX 18429480 intergenic not near genes chrX 18432167 intergenic not near genes chrX 18434854 intergenic not near genes chrX_6_18430001 chrX_18430001 RAL-908 2812 chrX 12946235 12946235 chrX 18572525 18572526 4 5626290 17.0 19.5 18.2 0.2 5626291 chrX 12946235 3` UTR fne + chrX 15759380 intron Graf - chrX 18572526 intergenic not near genes chrX_4_15755001 chrX_15755001 RAL-908 2813 chrX 18645005 18645044 chrX 18645111 18645162 11 115 2.0 2.5 2.2 3.4 157 chrX 18645005 intron Rip11 - chrX 18645084 intron Rip11 - chrX 18645162 intron Rip11 - chrX_11_18645001 chrX_18645001 RAL-908 2814 chrX 18754327 18754343 chrX 18758012 18758029 297 4 3684 3.5 3.5 3.5 0.9 3702 chrX 18754327 intergenic not near genes chrX 18756178 intergenic not near genes chrX 18758029 intergenic not near genes chrX_4_18755001 chrX_18755001 RAL-908 2815 chrX 18888635 18888688 chrX 18888742 18888793 9 101 2.0 3.0 2.5 2.6 158 chrX 18888635 3` UTR CG7332 + chrX 18888714 3` UTR CG7332 + chrX 18888793 3` UTR CG7332 + chrX_9_18885001 chrX_18885001 RAL-908 2816 chrX 18896497 18896545 chrX 18896628 18896676 8 130 4.0 2.5 3.2 1.9 179 chrX 18896497 3` UTR CG7349 + chrX 18896586 intergenic CG7349 + chrX 18896676 intergenic CG7349 + chrX_8_18895001 chrX_18895001 RAL-908 2817 chrX 18912422 18912471 chrX 18912536 18912586 8 114 2.5 4.0 3.2 1.9 164 chrX 18912422 5` UTR CR44708 + chrX 18912504 intron CR44708 + chrX 18912586 5` UTR CR44708 + chrX_8_18910001 chrX_18910001 RAL-908 2818 chrX 18950512 18950519 chrX 18950613 18950620 6 101 6.5 12.5 9.5 0.6 108 chrX 18950512 intron CG43759 + chrX 18950566 intron CG43759 + chrX 18950620 intron CG43759 + chrX_6_18950001 chrX_18950001 RAL-908 2819 chrX 18957052 18957098 chrX 18965734 18965781 roo 10 8683 3.0 4.5 3.8 2.1 8729 chrX 18957052 intron CG43759 + chrX 18961416 intron CG43759 + chrX 18965781 intron CG43759 + chrX_10_18960001 chrX_18960001 RAL-908 2820 chrX 19060408 19060434 chrX 19065212 19065238 Doc 4 4803 1.5 3.5 2.5 1.1 4830 chrX 19060408 intron CG14190 + chrX 19062823 intron CG14190 + chrX 19065238 intron CG14190 + chrX_4_19060001 chrX_19060001 RAL-908 2821 chrX 19073667 19073686 chrX 19073773 19073780 9 103 6.0 3.0 4.5 1.6 113 chrX 19073667 intergenic not near genes chrX 19073724 intergenic not near genes chrX 19073780 intergenic not near genes chrX_9_19070001 chrX_19070001 RAL-908 2822 chrX 19073691 19073698 chrX 19073771 19073805 7 102 4.5 3.0 3.8 1.5 114 chrX 19073691 intergenic not near genes chrX 19073748 intergenic not near genes chrX 19073805 intergenic not near genes chrX_7_19070001 chrX_19070001 RAL-908 2823 chrX 19098753 19098776 chrX 19098851 19098874 4 98 2.5 4.0 3.2 1.0 121 chrX 19098753 intergenic not near genes chrX 19098814 intergenic not near genes chrX 19098874 intergenic not near genes chrX_4_19095001 chrX_19095001 RAL-908 2824 chrX 19101192 19101210 chrX 19101327 19101345 6 135 1.5 0.0 0.8 3.3 153 chrX 19101192 intergenic not near genes chrX 19101268 intergenic not near genes chrX 19101345 intergenic not near genes chrX_6_19100001 chrX_19100001 RAL-908 2825 chrX 19119686 19119713 chrX 19119792 19119819 7 106 4.5 0.5 2.5 2.0 133 chrX 19119686 intergenic not near genes chrX 19119752 intergenic not near genes chrX 19119819 intergenic not near genes chrX_7_19115001 chrX_19115001 RAL-908 2826 chrX 19125672 19125719 chrX 19125821 19125860 12 145 3.0 5.5 4.2 2.3 188 chrX 19125672 intron tgy - chrX 19125766 intron tgy - chrX 19125860 intron tgy - chrX_12_19125001 chrX_19125001 RAL-908 2827 chrX 19136550 19136565 chrX 19143479 19143505 412 4 6937 2.0 2.5 2.2 1.2 6955 chrX 19136550 intergenic not near genes chrX 19140028 intergenic not near genes chrX 19143505 3` UTR RhoGAP18B - chrX_4_19140001 chrX_19140001 RAL-908 2828 chrX 19162651 19162699 chrX 19162755 19162803 7 104 2.0 3.0 2.5 2.0 152 chrX 19162651 intron RhoGAP18B - chrX 19162727 intron RhoGAP18B - chrX 19162803 intron RhoGAP18B - chrX_7_19160001 chrX_19160001 RAL-908 2829 chrX 19176188 19176237 chrX 19176292 19176341 10 103 2.5 1.5 2.0 3.3 153 chrX 19176188 3` UTR CG7556 - chrX 19176264 3` UTR CG7556 - chrX 19176341 3` UTR CG7556 - chrX_10_19175001 chrX_19175001 RAL-908 2830 chrX 19182005 19182047 chrX 19182137 19182179 15 130 2.5 5.0 3.8 3.1 174 chrX 19182005 3` UTR CG7453 + chrX 19182092 intergenic CG7453 + chrX 19182179 intergenic CG7453 + chrX_15_19180001 chrX_19180001 RAL-908 2831 chrX 19235519 19235542 chrX 19235609 19235650 7 103 2.0 3.0 2.5 2.0 131 chrX 19235519 3` UTR CG7884 + chrX 19235584 3` UTR CG7884 + chrX 19235650 3` UTR CG7884 + chrX_7_19235001 chrX_19235001 RAL-908 2832 chrX 19320206 19320251 chrX 19320314 19320359 12 107 2.0 2.0 2.0 4.0 153 chrX 19320206 intron out - chrX 19320282 intron out - chrX 19320359 intron out - chrX_12_19320001 chrX_19320001 RAL-908 2833 chrX 19356971 19357017 chrX 19358432 19358496 NOF 11 1463 6.5 0.0 3.2 2.6 1525 chrX 19356971 intron kek5 + chrX 19357734 intron kek5 + chrX 19358496 intron kek5 + chrX_11_19355001 chrX_19355001 RAL-908 2834 chrX 19380142 19380187 chrX 19380403 19380448 pogo 8 261 4.0 4.5 4.2 1.5 306 chrX 19380142 intron kek5 + chrX 19380295 intron kek5 + chrX 19380448 intron kek5 + chrX_8_19380001 chrX_19380001 RAL-908 2835 chrX 19404609 19404619 chrX 19404727 19404735 5 118 0.0 1.0 0.5 3.3 126 chrX 19404609 intron kek5 + chrX 19404672 intron kek5 + chrX 19404735 intron kek5 + chrX_5_19400001 chrX_19400001 RAL-908 2836 chrX 19472123 19472154 chrX 19472712 19472722 jockey 4 584 1.5 7.0 4.2 0.8 599 chrX 19472123 intergenic kek5 + chrX 19472422 intergenic not near genes chrX 19472722 intergenic not near genes chrX_4_19470001 chrX_19470001 RAL-908 2837 chrX 19554674 19554686 chrX 19554770 19554783 4 96 2.5 7.0 4.8 0.7 109 chrX 19554674 intergenic not near genes chrX 19554728 intergenic not near genes chrX 19554783 intergenic not near genes chrX_4_19550001 chrX_19550001 RAL-908 2838 chrX 19710052 19710104 chrX 19711858 19711910 S-element 14 1801 3.0 3.5 3.2 3.3 1858 chrX 19710052 intron meso18E - chrX 19710981 intron meso18E - chrX 19711910 intron meso18E - chrX_14_19710001 chrX_19710001 RAL-908 2839 chrX 19881443 19881485 chrX 19881544 19881586 14 100 3.5 4.0 3.8 2.9 143 chrX 19881443 intron Hers + chrX 19881514 intron Hers + chrX 19881586 intron Hers + chrX_14_19880001 chrX_19880001 RAL-908 2840 chrX 19883760 19883795 chrX 19883865 19883900 10 104 6.0 3.5 4.8 1.7 140 chrX 19883760 intron Hers + chrX 19883830 intron Hers + chrX 19883900 intron Hers + chrX_10_19880001 chrX_19880001 RAL-908 2841 chrX 19897362 19897415 chrX 19897459 19897512 8 97 5.0 3.0 4.0 1.6 150 chrX 19897362 intron Hers + chrX 19897437 intron Hers + chrX 19897512 intron Hers + chrX_8_19895001 chrX_19895001 RAL-908 2842 chrX 19971800 19971825 chrX 19971897 19971922 6 97 6.0 8.5 7.2 0.7 122 chrX 19971800 intergenic not near genes chrX 19971861 intergenic not near genes chrX 19971922 intergenic not near genes chrX_6_19970001 chrX_19970001 RAL-908 2843 chrX 19981977 19982023 chrX 19982085 19982131 10 107 3.0 1.5 2.2 3.1 154 chrX 19981977 intergenic not near genes chrX 19982054 intergenic not near genes chrX 19982131 intergenic not near genes chrX_10_19980001 chrX_19980001 RAL-908 2844 chrX 19983847 19983892 chrX 19983947 19983992 16 99 0.0 3.0 1.5 6.4 145 chrX 19983847 intergenic not near genes chrX 19983920 intergenic not near genes chrX 19983992 intergenic not near genes chrX_16_19980001 chrX_19980001 RAL-908 2845 chrX 20082757 20082784 chrX 20082839 20082887 7 96 0.0 2.5 1.2 3.2 130 chrX 20082757 intergenic not near genes chrX 20082822 intergenic not near genes chrX 20082887 intergenic not near genes chrX_7_20080001 chrX_20080001 RAL-908 2846 chrX 20271513 20271525 chrX 20271625 20271637 7 112 1.5 0.0 0.8 3.9 124 chrX 20271513 intergenic not near genes chrX 20271575 intergenic not near genes chrX 20271637 intergenic not near genes chrX_7_20270001 chrX_20270001 RAL-908 2847 chrX 20312863 20312908 chrX 20312961 20313006 12 98 3.5 3.0 3.2 2.9 143 chrX 20312863 intron CG1504 - chrX 20312934 intron CG1504 - chrX 20313006 intron CG1504 - chrX_12_20310001 chrX_20310001 RAL-908 2848 chrX 20359123 20359168 chrX 20359220 20359266 7 98 2.0 1.5 1.8 2.5 143 chrX 20359123 intergenic not near genes chrX 20359194 intergenic not near genes chrX 20359266 intergenic not near genes chrX_7_20355001 chrX_20355001 RAL-908 2849 chrX 20359753 20359770 chrX 20360043 20360060 4 290 5.5 0.5 3.0 1.0 307 chrX 20359753 intergenic not near genes chrX 20359906 intergenic not near genes chrX 20360060 intergenic not near genes chrX_4_20355001 chrX_20355001 RAL-908 2850 chrX 20369304 20369322 chrX 20369408 20369426 5 104 5.5 2.5 4.0 1.0 122 chrX 20369304 intergenic not near genes chrX 20369365 intergenic not near genes chrX 20369426 intergenic not near genes chrX_5_20365001 chrX_20365001 RAL-908 2851 chrX 20369327 20369342 chrX 20369404 20369446 4 97 2.0 2.0 2.0 1.3 119 chrX 20369327 intergenic not near genes chrX 20369386 intergenic not near genes chrX 20369446 intergenic not near genes chrX_4_20365001 chrX_20365001 RAL-908 2852 chrX 20371558 20371566 chrX 20371656 20371664 6 98 2.5 2.5 2.5 1.7 106 chrX 20371558 intergenic not near genes chrX 20371611 intergenic not near genes chrX 20371664 intergenic not near genes chrX_6_20370001 chrX_20370001 RAL-908 2853 chrX 20374071 20374124 chrX 20374167 20374220 6 95 0.5 2.0 1.2 2.7 149 chrX 20374071 intergenic not near genes chrX 20374146 intergenic not near genes chrX 20374220 intergenic not near genes chrX_6_20370001 chrX_20370001 RAL-908 2854 chrX 20377329 20377338 chrX 20378816 20378825 hobo 4 1486 3.5 4.5 4.0 0.8 1496 chrX 20377329 intergenic not near genes chrX 20378077 intergenic not near genes chrX 20378825 intergenic not near genes chrX_4_20375001 chrX_20375001 RAL-908 2855 chrX 20443167 20443203 chrX 20443263 20443299 7 96 2.5 3.5 3.0 1.8 132 chrX 20443167 exon CG1695 + chrX 20443233 intron CG1695 + chrX 20443299 intron CG1695 + chrX_7_20440001 chrX_20440001 RAL-908 2856 chrX 20467992 20468023 chrX 20468101 20468125 8 106 8.5 0.0 4.2 1.5 133 chrX 20467992 intron GstT3 + chrX 20468058 intron GstT3 + chrX 20468125 intron GstT3 + chrX_8_20465001 chrX_20465001 RAL-908 2857 chrX 20493912 20493930 chrX 20494093 20494111 5 181 0.0 8.5 4.2 1.0 199 chrX 20493912 intron RhoGAP19D - chrX 20494012 intron RhoGAP19D - chrX 20494111 intron RhoGAP19D - chrX_5_20490001 chrX_20490001 RAL-908 2858 chrX 20504107 20504144 chrX 20505647 20505685 transib2 8 1537 5.0 2.0 3.5 1.8 1578 chrX 20504107 intron RhoGAP19D - chrX 20504896 intron RhoGAP19D - chrX 20505685 intron RhoGAP19D - chrX_8_20500001 chrX_20500001 RAL-908 2859 chrX 20528579 20528630 chrX 20528947 20528998 16 368 3.0 5.0 4.0 3.2 419 chrX 20528579 intergenic not near genes chrX 20528788 intergenic not near genes chrX 20528998 intergenic not near genes chrX_16_20525001 chrX_20525001 RAL-908 2860 chrX 20531741 20531793 chrX 20531860 20531911 9 119 1.0 4.5 2.8 2.4 170 chrX 20531741 intergenic not near genes chrX 20531826 intergenic not near genes chrX 20531911 intergenic not near genes chrX_9_20530001 chrX_20530001 RAL-908 2861 chrX 20546542 20546564 chrX 20546728 20546750 9 186 6.0 6.0 6.0 1.3 208 chrX 20546542 intron RunxB + chrX 20546646 intron RunxB + chrX 20546750 intron RunxB + chrX_9_20545001 chrX_20545001 RAL-908 2862 chrX 20583727 20583757 chrX 20583918 20583958 6 198 0.5 0.0 0.2 5.0 231 chrX 20583727 intergenic not near genes chrX 20583842 intergenic not near genes chrX 20583958 intergenic not near genes chrX_6_20580001 chrX_20580001 RAL-908 2863 chrX 20635430 20635445 chrX 20635606 20635631 7 185 3.5 4.0 3.8 1.5 201 chrX 20635430 intergenic not near genes chrX 20635530 intergenic not near genes chrX 20635631 intergenic not near genes chrX_7_20635001 chrX_20635001 RAL-908 2864 chrX 20710419 20710442 chrX 20710517 20710540 5 98 2.0 3.0 2.5 1.4 121 chrX 20710419 intergenic not near genes chrX 20710480 intergenic not near genes chrX 20710540 intergenic not near genes chrX_5_20710001 chrX_20710001 RAL-908 2865 chrX 20721732 20721872 chrX 20721869 20721989 5 128 0.0 0.0 0.0 5.0 257 chrX 20721732 intergenic not near genes chrX 20721860 intergenic not near genes chrX 20721989 intergenic not near genes chrX_5_20720001 chrX_20720001 RAL-908 2866 chrX 20810703 20810712 chrX 20810801 20810810 4 97 9.5 2.5 6.0 0.6 107 chrX 20810703 intron shakB - chrX 20810756 intron shakB - chrX 20810810 intron shakB - chrX_4_20810001 chrX_20810001 RAL-908 2867 chrX 20836707 20836759 chrX 20844329 20844376 roo 13 7621 3.5 5.0 4.2 2.5 7669 chrX 20836707 intron shakB - chrX 20840542 intron shakB - chrX 20844376 intron shakB - chrX_13_20840001 chrX_20840001 RAL-908 2868 chrX 20871581 20871625 chrX 20871678 20871711 5 95 1.0 3.5 2.2 1.6 130 chrX 20871581 intron shakB - chrX 20871646 intron shakB - chrX 20871711 intron shakB - chrX_5_20870001 chrX_20870001 RAL-908 2869 chrX 20915032 20915075 chrX 20915223 20915266 10 191 3.0 3.5 3.2 2.4 234 chrX 20915032 intron shakB - chrX 20915149 intron shakB - chrX 20915266 intron shakB - chrX_10_20915001 chrX_20915001 RAL-908 2870 chrX 20940706 20940733 chrX 20942195 20942222 hobo 11 1489 4.0 1.0 2.5 3.1 1516 chrX 20940706 intergenic not near genes chrX 20941464 intergenic not near genes chrX 20942222 intergenic not near genes chrX_11_20940001 chrX_20940001 RAL-908 2871 chrX 20981007 20981040 chrX 20981130 20981163 7 123 5.5 1.0 3.2 1.7 156 chrX 20981007 intergenic not near genes chrX 20981085 intergenic not near genes chrX 20981163 intergenic not near genes chrX_7_20980001 chrX_20980001 RAL-908 2872 chrX 21022250 21022266 chrX 21022439 21022455 6 189 26.5 9.0 17.8 0.3 205 chrX 21022250 intergenic not near genes chrX 21022352 intergenic not near genes chrX 21022455 intergenic not near genes chrX_6_21020001 chrX_21020001 RAL-908 2873 chrX 21061856 21061896 chrX 21062362 21062402 roo 16 506 2.0 6.5 4.2 3.1 546 chrX 21061856 intron bves + chrX 21062129 intron bves + chrX 21062402 intron,3` UTR bves +,CG32512 - chrX_16_21060001 chrX_21060001 RAL-908 2874 chrX 21076311 21076354 chrX 21076410 21076453 7 99 5.0 0.0 2.5 2.0 142 chrX 21076311 intron bves + chrX 21076382 intron bves + chrX 21076453 intron bves + chrX_7_21075001 chrX_21075001 RAL-908 2875 chrX 21077576 21077631 chrX 21077684 21077739 10 108 2.5 5.5 4.0 2.0 163 chrX 21077576 intron bves + chrX 21077658 intron bves + chrX 21077739 intron bves + chrX_10_21075001 chrX_21075001 RAL-908 2876 chrX 21078761 21078782 chrX 21078854 21078880 7 95 4.0 1.5 2.8 1.8 119 chrX 21078761 intron bves + chrX 21078820 intron bves + chrX 21078880 intron bves + chrX_7_21075001 chrX_21075001 RAL-908 2877 chrX 21086112 21086131 chrX 21087159 21087180 jockey 4 1048 7.5 2.0 4.8 0.7 1068 chrX 21086112 intergenic not near genes chrX 21086646 intergenic not near genes chrX 21087180 intergenic not near genes chrX_4_21085001 chrX_21085001 RAL-908 2878 chrX 21086134 21086162 chrX 21087157 21087211 jockey 10 1046 3.5 2.0 2.8 2.6 1077 chrX 21086134 intergenic not near genes chrX 21086672 intergenic not near genes chrX 21087211 intergenic not near genes chrX_10_21085001 chrX_21085001 RAL-908 2879 chrX 21088022 21088071 chrX 21088174 21088222 12 149 3.5 2.0 2.8 3.2 200 chrX 21088022 intergenic not near genes chrX 21088122 intergenic not near genes chrX 21088222 intergenic not near genes chrX_12_21085001 chrX_21085001 RAL-908 2880 chrX 21166120 21166164 chrX 21166218 21166265 8 98 2.0 3.5 2.8 2.1 145 chrX 21166120 intergenic not near genes chrX 21166192 intergenic not near genes chrX 21166265 intergenic not near genes chrX_8_21165001 chrX_21165001 RAL-908 2881 chrX 21188608 21188643 chrX 21188704 21188739 10 93 3.5 5.0 4.2 1.9 131 chrX 21188608 5` UTR CR45506 + chrX 21188674 5` UTR CR45506 + chrX 21188739 5` UTR CR45506 + chrX_10_21185001 chrX_21185001 RAL-908 2882 chrX 21190557 21190825 chrX 21190733 21190917 10 127 0.0 0.0 0.0 10.0 360 chrX 21190557 intergenic not near genes chrX 21190737 intergenic not near genes chrX 21190917 intergenic not near genes chrX_10_21190001 chrX_21190001 RAL-908 2883 chrX 21197060 21197089 chrX 21197146 21197187 6 96 1.0 4.5 2.8 1.6 127 chrX 21197060 intergenic not near genes chrX 21197124 intergenic not near genes chrX 21197187 intergenic not near genes chrX_6_21195001 chrX_21195001 RAL-908 2884 chrX 21268053 21268086 chrX 21268151 21268187 6 100 3.0 2.0 2.5 1.7 134 chrX 21268053 intron CG32521 - chrX 21268120 intron CG32521 - chrX 21268187 intron CG32521 - chrX_6_21265001 chrX_21265001 RAL-908 2885 chrX 21328098 21328147 chrX 21328229 21328278 19 131 5.0 1.0 3.0 4.8 180 chrX 21328098 3` UTR CG1486 + chrX 21328188 intergenic CG1486 +,tty - chrX 21328278 intergenic CG1486 +,tty - chrX_19_21325001 chrX_21325001 RAL-908 2886 chrX 21334316 21334367 chrX 21334441 21334492 11 124 4.0 2.5 3.2 2.6 176 chrX 21334316 intron tty - chrX 21334404 intron tty - chrX 21334492 intron tty - chrX_11_21330001 chrX_21330001 RAL-908 2887 chrX 21358060 21358094 chrX 21358160 21358194 5 100 6.0 5.0 5.5 0.8 134 chrX 21358060 intergenic sol +,Sep1 + chrX 21358127 intergenic Sep1 +,sol + chrX 21358194 intergenic Sep1 +,sol + chrX_5_21355001 chrX_21355001 RAL-908 2888 chrX 21455224 21455243 chrX 21455396 21455450 4 198 0.5 0.0 0.2 3.3 226 chrX 21455224 intron CG42343 - chrX 21455337 intron CG42343 - chrX 21455450 intron CG42343 - chrX_4_21455001 chrX_21455001 RAL-908 2889 chrX 21458684 21458713 chrX 21464140 21464169 Ivk 9 5456 5.5 5.5 5.5 1.4 5485 chrX 21458684 intergenic not near genes chrX 21461426 intergenic not near genes chrX 21464169 intergenic not near genes chrX_9_21460001 chrX_21460001 RAL-908 2890 chrX 21516975 21516992 chrX 21517074 21517074 6 96 3.5 6.5 5.0 1.0 99 chrX 21516975 intron CR45082 - chrX 21517024 intron CR45082 - chrX 21517074 intron CR45082 - chrX_6_21515001 chrX_21515001 RAL-908 2891 chrX 21517006 21517020 chrX 21517071 21517119 5 87 2.0 6.5 4.2 1.0 113 chrX 21517006 intron CR45082 - chrX 21517062 intron CR45082 - chrX 21517119 intron CR45082 - chrX_5_21515001 chrX_21515001 RAL-908 2892 chrX 21565398 21565439 chrX 21565496 21565537 13 98 2.5 3.5 3.0 3.2 139 chrX 21565398 intergenic not near genes chrX 21565468 intergenic not near genes chrX 21565537 intergenic not near genes chrX_13_21565001 chrX_21565001 RAL-908 2893 chrX 21581537 21581572 chrX 21581638 21581673 8 101 2.0 0.0 1.0 4.0 136 chrX 21581537 intergenic not near genes chrX 21581605 intergenic not near genes chrX 21581673 intergenic not near genes chrX_8_21580001 chrX_21580001 RAL-908 2894 chrX 21668238 21668287 chrX 21668343 21668392 19 104 19.5 16.0 17.8 1.0 154 chrX 21668238 intergenic not near genes chrX 21668315 intergenic not near genes chrX 21668392 intergenic not near genes chrX_19_21665001 chrX_21665001 RAL-908 2895 chrX 22448253 22448293 chrX 22448412 22448452 5 159 4.5 2.0 3.2 1.2 199 chrX 22448253 intron CG14615 - chrX 22448352 intron CG14615 - chrX 22448452 intron CG14615 - chrX_5_22445001 chrX_22445001 RAL-908 2896 chrX 22478878 22478894 chrX 22479031 22479047 7 153 0.0 1.0 0.5 4.7 169 chrX 22478878 intron CG12576 - chrX 22478962 intron CG12576 - chrX 22479047 intron CG12576 - chrX_7_22475001 chrX_22475001 RAL-908 2897 chrX 22564567 22564579 chrX 22575119 22575131 jockey 4 10552 15.5 4.0 9.8 0.4 10564 chrX 22564567 intergenic not near genes chrX 22569849 intergenic not near genes chrX 22575131 intergenic not near genes chrX_4_22565001 chrX_22565001 RAL-908 2898 chrX 22585502 22585529 chrX 22585605 22585633 4 103 1.5 3.0 2.2 1.2 131 chrX 22585502 intron Cda4 - chrX 22585568 intron Cda4 - chrX 22585633 intron Cda4 - chrX_4_22585001 chrX_22585001 RAL-908 2899 chrX 22586019 22586031 chrX 22644848 22644860 4 58829 14.0 6.5 10.2 0.4 58841 chrX 22586019 intron Cda4 - chrX 22615440 intron Cda4 - chrX 22644860 intergenic not near genes chrX_4_22615001 chrX_22615001 RAL-908 2900 chrX 22661960 22662005 chrX 22662077 22662124 10 117 0.0 0.0 0.0 10.0 164 chrX 22661960 intron CR44997 + chrX 22662042 intron CR44997 + chrX 22662124 intron CR44997 + chrX_10_22660001 chrX_22660001 RAL-908 2901 chrX 22697479 22697515 chrX 22701796 22701832 Juan 13 4317 3.5 3.0 3.2 3.1 4353 chrX 22697479 intron CR44997 + chrX 22699656 intron CR44997 + chrX 22701832 intron CR44997 + chrX_13_22695001 chrX_22695001 RAL-908 2902 chrX 22771489 22771538 chrX 22774797 22774849 297 10 3305 3.5 3.0 3.2 2.4 3360 chrX 22771489 intron CR44997 + chrX 22773169 intron CR44997 + chrX 22774849 intron CR44997 + chrX_10_22770001 chrX_22770001 RAL-908 2903 chrX 22784057 22784105 chrX 22784160 22784208 11 103 3.0 2.0 2.5 3.1 151 chrX 22784057 intron CR44997 + chrX 22784132 intron CR44997 + chrX 22784208 intron CR44997 + chrX_11_22780001 chrX_22780001 RAL-908 2904 chrX 22798762 22798779 chrX 22798892 22798906 4 132 6.0 1.5 3.8 0.8 144 chrX 22798762 intergenic not near genes chrX 22798834 intergenic not near genes chrX 22798906 intergenic not near genes chrX_4_22795001 chrX_22795001 RAL-908 2905 chrX 22811977 22811989 chrX 22816769 22816781 F-element 4 4792 4.5 6.0 5.2 0.6 4804 chrX 22811977 intergenic CG12446 - chrX 22814379 intergenic not near genes chrX 22816781 intergenic not near genes chrX_4_22810001 chrX_22810001 RAL-908 2906 chrX 22824218 22824442 chrX 22824364 22824595 24 149 3.5 3.5 3.5 5.3 377 chrX 22824218 intergenic fog - chrX 22824406 3` UTR fog - chrX 22824595 3` UTR fog - chrX_24_22820001 chrX_22820001 RAL-908 2907 chrX 22867959 22868010 chrX 22868093 22868152 7 136 2.5 0.0 1.2 3.2 193 chrX 22867959 exon CG42346 + chrX 22868056 intron CG42346 + chrX 22868152 intron CG42346 + chrX_7_22865001 chrX_22865001 RAL-908 2908 chrX 22870857 22870898 chrX 22870968 22871009 10 108 0.5 2.5 1.5 4.0 152 chrX 22870857 intron,3` UTR CG42346 +,CR43656 - chrX 22870933 intron,3` UTR CG42346 +,CR43656 - chrX 22871009 intron,3` UTR CG42346 +,CR43656 - chrX_10_22870001 chrX_22870001 RAL-908 2909 chrX 22895704 22895745 chrX 22895842 22895883 7 134 3.5 2.0 2.8 1.8 179 chrX 22895704 intergenic not near genes chrX 22895794 intergenic not near genes chrX 22895883 intergenic not near genes chrX_7_22895001 chrX_22895001 RAL-908 2910 chrX 22967373 22967492 chrX 23154544 23154689 diver 9 187177 1.5 9.5 5.5 1.4 187316 chrX 22967373 intergenic not near genes chrX 23061031 intergenic not near genes chrX 23154689 intergenic not near genes chrX_9_23060001 chrX_23060001 RAL-908 2911 chrX 22987084 22987130 chrX 22989763 22989809 Burdock 5 2679 4.0 5.5 4.8 0.9 2725 chrX 22987084 intron,intron stnA -,stnB - chrX 22988446 intron,intron stnA -,stnB - chrX 22989809 intron,intron stnA -,stnB - chrX_5_22985001 chrX_22985001 RAL-908 2912 chrX 22996292 22996335 chrX 23003546 23003589 roo 8 7250 4.0 6.0 5.0 1.3 7297 chrX 22996292 intron,intron stnA -,stnB - chrX 22999940 intron,intron stnA -,stnB - chrX 23003589 intron,intron stnA -,stnB - chrX_8_22995001 chrX_22995001 RAL-908 2913 chrY 975772 975814 chrY 975872 975914 5 100 53.0 62.5 57.8 0.1 142 chrY 975772 intergenic not near genes chrY 975843 intergenic not near genes chrY 975914 intergenic not near genes chrY_5_975001 chrY_975001 RAL-908 2914 chrY 1419887 1419912 chrY 1420161 1420186 6 273 16.5 17.5 17.0 0.3 299 chrY 1419887 intergenic not near genes chrY 1420036 intergenic not near genes chrY 1420186 intergenic not near genes chrY_6_1420001 chrY_1420001 RAL-908