SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 46337 46381 chr2L 46435 46478 13 97 6.5 6.0 6.2 1.8 141 chr2L 46337 intron Cda5 - chr2L 46408 intron Cda5 - chr2L 46478 intron Cda5 - chr2L_13_45001 chr2L_45001 RAL-907 2 chr2L 47456 47483 chr2L 52569 52608 jockey 8 5122 5.0 5.5 5.2 1.3 5152 chr2L 47456 intron Cda5 - chr2L 50032 intron Cda5 - chr2L 52608 intron Cda5 - chr2L_8_50001 chr2L_50001 RAL-907 3 chr2L 62026 62067 chr2L 62280 62304 7 242 30.0 23.5 26.8 0.3 278 chr2L 62026 intron Cda5 - chr2L 62165 intron Cda5 - chr2L 62304 intron Cda5 - chr2L_7_60001 chr2L_60001 RAL-907 4 chr2L 79829 79860 chr2L 80181 80223 10 362 5.5 3.0 4.2 1.9 394 chr2L 79829 intergenic not near genes chr2L 80026 intergenic not near genes chr2L 80223 intergenic not near genes chr2L_10_80001 chr2L_80001 RAL-907 5 chr2L 134840 134851 chr2L 134948 134953 4 106 4.0 2.0 3.0 1.0 113 chr2L 134840 intron CG11455 + chr2L 134896 intron CG11455 + chr2L 134953 intron CG11455 + chr2L_4_130001 chr2L_130001 RAL-907 6 chr2L 172042 172068 chr2L 172143 172169 4 101 2.0 1.5 1.8 1.4 127 chr2L 172042 intron spen + chr2L 172106 intron spen + chr2L 172169 intron spen + chr2L_4_170001 chr2L_170001 RAL-907 7 chr2L 263284 263318 chr2L 263450 263475 18 164 1.5 5.5 3.5 4.0 191 chr2L 263284 intron,3` UTR CG3645 -,CG17075 - chr2L 263380 intron,3` UTR CG3645 -,CG17075 - chr2L 263475 intron,3` UTR CG3645 -,CG17075 - chr2L_18_260001 chr2L_260001 RAL-907 8 chr2L 297667 297718 chr2L 297787 297814 10 114 2.0 2.5 2.2 3.1 147 chr2L 297667 intergenic Pi3K21B +,Hop + chr2L 297740 intergenic Pi3K21B +,Hop + chr2L 297814 intergenic Pi3K21B +,Hop + chr2L_10_295001 chr2L_295001 RAL-907 9 chr2L 325130 325154 chr2L 325218 325221 5 84 5.5 6.5 6.0 0.7 91 chr2L 325130 intron Plc21C + chr2L 325176 intron Plc21C + chr2L 325221 intron Plc21C + chr2L_5_325001 chr2L_325001 RAL-907 10 chr2L 347875 347919 chr2L 355391 355431 blood 9 7510 2.5 4.5 3.5 2.0 7556 chr2L 347875 3` UTR Plc21C + chr2L 351653 intron Plc21C + chr2L 355431 3` UTR Plc21C + chr2L_9_350001 chr2L_350001 RAL-907 11 chr2L 371425 371458 chr2L 371524 371555 6 99 4.0 5.5 4.8 1.0 130 chr2L 371425 intergenic not near genes chr2L 371490 intergenic not near genes chr2L 371555 intergenic not near genes chr2L_6_370001 chr2L_370001 RAL-907 12 chr2L 407932 407972 chr2L 408029 408073 14 100 4.5 2.5 3.5 3.1 141 chr2L 407932 3` UTR RpI135 + chr2L 408002 intergenic AP-2alpha -,RpI135 + chr2L 408073 3` UTR AP-2alpha - chr2L_14_405001 chr2L_405001 RAL-907 13 chr2L 588645 588679 chr2L 588757 588791 5 112 1.0 6.0 3.5 1.1 146 chr2L 588645 intron Gsc - chr2L 588718 intron Gsc - chr2L 588791 intron Gsc - chr2L_5_585001 chr2L_585001 RAL-907 14 chr2L 630288 630326 chr2L 630399 630403 5 99 4.0 0.5 2.2 1.6 115 chr2L 630288 intergenic not near genes chr2L 630346 intergenic not near genes chr2L 630403 intergenic not near genes chr2L_5_630001 chr2L_630001 RAL-907 15 chr2L 741253 741294 chr2L 744771 744814 14 3520 18.0 21.5 19.8 0.7 3561 chr2L 741253 intron Eaat2 - chr2L 743034 intron Eaat2 - chr2L 744814 intergenic Eaat2 - chr2L_14_740001 chr2L_740001 RAL-907 16 chr2L 770448 770482 chr2L 772245 772249 Bari1 6 1784 4.0 1.0 2.5 1.7 1801 chr2L 770448 intergenic not near genes chr2L 771348 intergenic not near genes chr2L 772249 intergenic CR44614 + chr2L_6_770001 chr2L_770001 RAL-907 17 chr2L 770483 770492 chr2L 772244 772292 Bari1 4 1775 1.5 1.0 1.2 1.8 1809 chr2L 770483 intergenic not near genes chr2L 771388 intergenic not near genes chr2L 772292 intergenic CR44614 + chr2L_4_770001 chr2L_770001 RAL-907 18 chr2L 791440 791468 chr2L 791554 791582 12 114 3.5 6.0 4.8 2.1 142 chr2L 791440 intergenic not near genes chr2L 791511 intergenic not near genes chr2L 791582 intergenic not near genes chr2L_12_790001 chr2L_790001 RAL-907 19 chr2L 849462 849481 chr2L 849573 849592 4 108 2.0 6.5 4.2 0.8 130 chr2L 849462 intron drongo - chr2L 849527 intron drongo - chr2L 849592 intron drongo - chr2L_4_845001 chr2L_845001 RAL-907 20 chr2L 877829 877874 chr2L 877929 877975 9 96 2.5 3.0 2.8 2.4 146 chr2L 877829 3` UTR,exon CG15824 -,ninaA + chr2L 877902 3` UTR,intron CG15824 -,ninaA + chr2L 877975 3` UTR,exon CG15824 -,ninaA + chr2L_9_875001 chr2L_875001 RAL-907 21 chr2L 922446 922495 chr2L 922544 922588 15 96 6.5 3.5 5.0 2.5 142 chr2L 922446 intergenic CG4341 + chr2L 922517 intergenic CG4341 + chr2L 922588 intergenic CG4341 + chr2L_15_920001 chr2L_920001 RAL-907 22 chr2L 923521 923570 chr2L 923706 923734 8 180 6.0 9.0 7.5 0.9 213 chr2L 923521 intron CG4341 + chr2L 923628 intron CG4341 + chr2L 923734 intron CG4341 + chr2L_8_920001 chr2L_920001 RAL-907 23 chr2L 924572 924621 chr2L 924866 924912 5 291 1.0 1.5 1.2 2.3 340 chr2L 924572 intron CG4341 + chr2L 924742 intron CG4341 + chr2L 924912 intron CG4341 + chr2L_5_920001 chr2L_920001 RAL-907 24 chr2L 937714 937769 chr2L 938073 938105 14 351 2.5 5.0 3.8 2.9 391 chr2L 937714 intron CG4341 + chr2L 937910 intron CG4341 + chr2L 938105 intron CG4341 + chr2L_14_935001 chr2L_935001 RAL-907 25 chr2L 976865 976898 chr2L 984520 984545 roo 12 7655 7.5 3.0 5.2 1.9 7680 chr2L 976865 intergenic not near genes chr2L 980705 intergenic not near genes chr2L 984545 intergenic not near genes chr2L_12_980001 chr2L_980001 RAL-907 26 chr2L 996702 996721 chr2L 1005817 1005836 roo 8 9115 0.5 2.5 1.5 3.2 9134 chr2L 996702 intergenic not near genes chr2L 1001269 intergenic not near genes chr2L 1005836 intergenic not near genes chr2L_8_1000001 chr2L_1000001 RAL-907 27 chr2L 1035543 1035590 chr2L 1035639 1035683 15 94 2.5 2.5 2.5 4.3 140 chr2L 1035543 intron IA-2 - chr2L 1035613 intron IA-2 - chr2L 1035683 intron IA-2 - chr2L_15_1035001 chr2L_1035001 RAL-907 28 chr2L 1042598 1042613 chr2L 1042695 1042710 14 97 2.0 0.0 1.0 7.0 112 chr2L 1042598 intron IA-2 - chr2L 1042654 intron IA-2 - chr2L 1042710 intron IA-2 - chr2L_14_1040001 chr2L_1040001 RAL-907 29 chr2L 1066096 1066128 chr2L 1066177 1066213 10 94 3.0 4.5 3.8 2.1 117 chr2L 1066096 intron S - chr2L 1066154 intron S - chr2L 1066213 intron S - chr2L_10_1065001 chr2L_1065001 RAL-907 30 chr2L 1137636 1137687 chr2L 1137833 1137887 19 198 4.5 2.0 3.2 4.5 251 chr2L 1137636 intron CG4577 + chr2L 1137762 intron CG4577 + chr2L 1137887 intron CG4577 + chr2L_19_1135001 chr2L_1135001 RAL-907 31 chr2L 1220107 1220158 chr2L 1227593 1227644 blood 10 7483 5.0 3.0 4.0 2.0 7537 chr2L 1220107 intron CG42329 + chr2L 1223876 intron CG42329 + chr2L 1227644 intron CG42329 + chr2L_10_1220001 chr2L_1220001 RAL-907 32 chr2L 1237964 1238002 chr2L 1238068 1238106 11 104 3.0 2.0 2.5 3.1 142 chr2L 1237964 intergenic not near genes chr2L 1238035 intergenic not near genes chr2L 1238106 intergenic not near genes chr2L_11_1235001 chr2L_1235001 RAL-907 33 chr2L 1244392 1244436 chr2L 1244489 1244533 15 96 0.5 3.5 2.0 5.0 141 chr2L 1244392 intergenic not near genes chr2L 1244462 intergenic not near genes chr2L 1244533 intergenic not near genes chr2L_15_1240001 chr2L_1240001 RAL-907 34 chr2L 1267270 1267285 chr2L 1267536 1267563 4 271 6.0 3.0 4.5 0.7 293 chr2L 1267270 intron robo3 + chr2L 1267416 intron robo3 + chr2L 1267563 intron robo3 + chr2L_4_1265001 chr2L_1265001 RAL-907 35 chr2L 1301751 1301778 chr2L 1302301 1302337 gypsy 4 556 0.0 5.5 2.8 1.1 586 chr2L 1301751 intergenic not near genes chr2L 1302044 intergenic not near genes chr2L 1302337 intergenic not near genes chr2L_4_1300001 chr2L_1300001 RAL-907 36 chr2L 1320261 1320300 chr2L 1320359 1320371 5 83 2.0 3.0 2.5 1.4 110 chr2L 1320261 intergenic not near genes chr2L 1320316 intergenic not near genes chr2L 1320371 intergenic not near genes chr2L_5_1320001 chr2L_1320001 RAL-907 37 chr2L 1322002 1322050 chr2L 1322111 1322159 14 107 3.5 2.0 2.8 3.7 157 chr2L 1322002 intergenic not near genes chr2L 1322080 intergenic not near genes chr2L 1322159 intergenic not near genes chr2L_14_1320001 chr2L_1320001 RAL-907 38 chr2L 1503385 1503428 chr2L 1503494 1503537 18 108 4.5 4.0 4.2 3.5 152 chr2L 1503385 intron CR44064 + chr2L 1503461 intron CR44064 + chr2L 1503537 intron CR44064 + chr2L_18_1500001 chr2L_1500001 RAL-907 39 chr2L 1570672 1570708 chr2L 1573564 1573600 F-element 7 2892 8.5 4.0 6.2 1.0 2928 chr2L 1570672 intron haf + chr2L 1572136 intron haf + chr2L 1573600 intron haf + chr2L_7_1570001 chr2L_1570001 RAL-907 40 chr2L 1584133 1584175 chr2L 1584383 1584430 4 256 17.5 1.0 9.2 0.4 297 chr2L 1584133 intron haf + chr2L 1584282 intron haf + chr2L 1584430 intron haf + chr2L_4_1580001 chr2L_1580001 RAL-907 41 chr2L 1584126 1584143 chr2L 1584356 1584361 6 224 22.0 3.0 12.5 0.4 235 chr2L 1584126 intron haf + chr2L 1584244 intron haf + chr2L 1584361 intron haf + chr2L_6_1580001 chr2L_1580001 RAL-907 42 chr2L 1590936 1590990 chr2L 1591032 1591066 8 91 4.5 1.5 3.0 2.0 130 chr2L 1590936 intron haf + chr2L 1591001 intron haf + chr2L 1591066 intron haf + chr2L_8_1590001 chr2L_1590001 RAL-907 43 chr2L 1635418 1635429 chr2L 1635549 1635575 6 146 2.0 7.5 4.8 1.0 157 chr2L 1635418 intergenic not near genes chr2L 1635496 intergenic not near genes chr2L 1635575 intergenic not near genes chr2L_6_1635001 chr2L_1635001 RAL-907 44 chr2L 1662014 1662028 chr2L 1662119 1662133 5 105 3.5 0.0 1.8 1.8 119 chr2L 1662014 intron chinmo + chr2L 1662074 intron chinmo + chr2L 1662133 intron chinmo + chr2L_5_1660001 chr2L_1660001 RAL-907 45 chr2L 1678956 1679008 chr2L 1686441 1686493 blood 18 7483 3.0 4.5 3.8 3.8 7537 chr2L 1678956 intron chinmo + chr2L 1682724 intron chinmo + chr2L 1686493 intron chinmo + chr2L_18_1680001 chr2L_1680001 RAL-907 46 chr2L 1699254 1699290 chr2L 1699357 1699391 9 101 0.5 5.0 2.8 2.4 137 chr2L 1699254 3` UTR chinmo + chr2L 1699322 3` UTR chinmo + chr2L 1699391 3` UTR chinmo + chr2L_9_1695001 chr2L_1695001 RAL-907 47 chr2L 1711344 1711389 chr2L 1711688 1711695 mdg3 9 337 2.5 3.5 3.0 2.2 351 chr2L 1711344 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711520 3` UTR frtz - chr2L 1711695 3` UTR frtz - chr2L_9_1710001 chr2L_1710001 RAL-907 48 chr2L 1842265 1842317 chr2L 1842364 1842413 8 90 1.0 3.0 2.0 2.7 148 chr2L 1842265 intron wry + chr2L 1842339 intron wry + chr2L 1842413 intron wry + chr2L_8_1840001 chr2L_1840001 RAL-907 49 chr2L 2043459 2043501 chr2L 2043569 2043611 11 109 2.5 3.5 3.0 2.8 152 chr2L 2043459 3` UTR Su(dx) + chr2L 2043535 3` UTR Su(dx) + chr2L 2043611 3` UTR Su(dx) + chr2L_11_2040001 chr2L_2040001 RAL-907 50 chr2L 2100385 2100408 chr2L 2109525 2109529 roo 5 9148 6.0 2.5 4.2 1.0 9144 chr2L 2100385 intron dpr3 - chr2L 2104957 intron dpr3 - chr2L 2109529 intron dpr3 - chr2L_5_2100001 chr2L_2100001 RAL-907 51 chr2L 2110633 2110639 chr2L 2110998 2111004 4 365 0.0 5.0 2.5 1.1 371 chr2L 2110633 intergenic not near genes chr2L 2110818 intergenic not near genes chr2L 2111004 intergenic not near genes chr2L_4_2110001 chr2L_2110001 RAL-907 52 chr2L 2299316 2299358 chr2L 2299409 2299456 11 97 1.5 4.5 3.0 2.8 140 chr2L 2299316 intergenic not near genes chr2L 2299386 intergenic not near genes chr2L 2299456 intergenic not near genes chr2L_11_2295001 chr2L_2295001 RAL-907 53 chr2L 2317107 2317129 chr2L 2317298 2317320 5 191 19.5 11.5 15.5 0.3 213 chr2L 2317107 intron,intron CG9967 -,eys + chr2L 2317214 intron,intron CG9967 -,eys + chr2L 2317320 intron,intron CG9967 -,eys + chr2L_5_2315001 chr2L_2315001 RAL-907 54 chr2L 2380418 2380462 chr2L 2380514 2380558 14 96 5.0 2.5 3.8 2.9 140 chr2L 2380418 3` UTR Atxn7 + chr2L 2380488 3` UTR Atxn7 + chr2L 2380558 intergenic Atxn7 + chr2L_14_2380001 chr2L_2380001 RAL-907 55 chr2L 2396282 2396289 chr2L 2396380 2396387 5 98 4.0 4.5 4.2 1.0 105 chr2L 2396282 intron VGlut + chr2L 2396334 intron VGlut + chr2L 2396387 intron VGlut + chr2L_5_2395001 chr2L_2395001 RAL-907 56 chr2L 2557823 2557843 chr2L 2557918 2557948 8 99 0.0 5.5 2.8 2.1 125 chr2L 2557823 intergenic not near genes chr2L 2557886 intergenic not near genes chr2L 2557948 intergenic not near genes chr2L_8_2555001 chr2L_2555001 RAL-907 57 chr2L 2565529 2565566 chr2L 2571607 2571654 297 11 6082 1.5 3.5 2.5 3.1 6125 chr2L 2565529 exon Cyp309a2 - chr2L 2568592 intron Cyp309a2 - chr2L 2571654 exon Cyp309a2 - chr2L_11_2565001 chr2L_2565001 RAL-907 58 chr2L 2587816 2587838 chr2L 2587907 2587937 5 96 0.5 8.0 4.2 1.0 121 chr2L 2587816 intergenic not near genes chr2L 2587876 intergenic not near genes chr2L 2587937 intergenic not near genes chr2L_5_2585001 chr2L_2585001 RAL-907 59 chr2L 2637818 2637861 chr2L 2638234 2638267 7 407 4.0 2.5 3.2 1.7 449 chr2L 2637818 intergenic not near genes chr2L 2638042 intergenic not near genes chr2L 2638267 intergenic not near genes chr2L_7_2635001 chr2L_2635001 RAL-907 60 chr2L 2661220 2661232 chr2L 2663030 2663050 I-element 5 1820 0.0 0.0 0.0 5.0 1830 chr2L 2661220 intergenic not near genes chr2L 2662135 intergenic not near genes chr2L 2663050 intergenic not near genes chr2L_5_2660001 chr2L_2660001 RAL-907 61 chr2L 2702596 2702609 chr2L 2702697 2702710 5 101 11.0 7.5 9.2 0.5 114 chr2L 2702596 intron CG31690 + chr2L 2702653 intron CG31690 + chr2L 2702710 intron CG31690 + chr2L_5_2700001 chr2L_2700001 RAL-907 62 chr2L 2702616 2702637 chr2L 2702717 2702736 8 101 7.5 11.5 9.5 0.8 120 chr2L 2702616 intron CG31690 + chr2L 2702676 intron CG31690 + chr2L 2702736 intron CG31690 + chr2L_8_2700001 chr2L_2700001 RAL-907 63 chr2L 2703426 2703443 chr2L 2703530 2703547 5 104 2.5 6.0 4.2 1.0 121 chr2L 2703426 intron CG31690 + chr2L 2703486 intron CG31690 + chr2L 2703547 intron CG31690 + chr2L_5_2700001 chr2L_2700001 RAL-907 64 chr2L 2713516 2713521 chr2L 2713614 2713640 4 112 9.5 4.5 7.0 0.5 124 chr2L 2713516 intron CG31690 + chr2L 2713578 intron CG31690 + chr2L 2713640 intron CG31690 + chr2L_4_2710001 chr2L_2710001 RAL-907 65 chr2L 2713532 2713545 chr2L 2713609 2713644 5 97 4.5 4.5 4.5 0.9 112 chr2L 2713532 intron CG31690 + chr2L 2713588 intron CG31690 + chr2L 2713644 intron CG31690 + chr2L_5_2710001 chr2L_2710001 RAL-907 66 chr2L 2724385 2724437 chr2L 2724481 2724533 11 96 1.0 5.5 3.2 2.6 148 chr2L 2724385 intergenic not near genes chr2L 2724459 intergenic not near genes chr2L 2724533 intergenic not near genes chr2L_11_2720001 chr2L_2720001 RAL-907 67 chr2L 2734496 2734531 chr2L 2734593 2734628 7 97 6.5 2.5 4.5 1.3 132 chr2L 2734496 intron CG31689 + chr2L 2734562 intron CG31689 + chr2L 2734628 intron CG31689 + chr2L_7_2730001 chr2L_2730001 RAL-907 68 chr2L 2772592 2772610 chr2L 2779196 2779204 297 6 6602 7.5 13.0 10.2 0.5 6612 chr2L 2772592 3` UTR Syt1 - chr2L 2775898 intron Syt1 - chr2L 2779204 3` UTR Syt1 - chr2L_6_2775001 chr2L_2775001 RAL-907 69 chr2L 2830396 2830419 chr2L 2830546 2830569 7 150 5.0 5.0 5.0 1.2 173 chr2L 2830396 intergenic Duox - chr2L 2830482 intergenic Duox - chr2L 2830569 intergenic Duox - chr2L_7_2830001 chr2L_2830001 RAL-907 70 chr2L 2836143 2836174 chr2L 2836221 2836272 8 93 1.5 2.0 1.8 2.9 129 chr2L 2836143 intron CG3119 - chr2L 2836208 intron CG3119 - chr2L 2836272 intron CG3119 - chr2L_8_2835001 chr2L_2835001 RAL-907 71 chr2L 2895669 2895718 chr2L 2895775 2895810 14 104 6.5 0.5 3.5 3.1 141 chr2L 2895669 intron lilli + chr2L 2895740 intron lilli + chr2L 2895810 intron lilli + chr2L_14_2895001 chr2L_2895001 RAL-907 72 chr2L 2937394 2937424 chr2L 2937492 2937522 13 98 6.5 0.5 3.5 2.9 128 chr2L 2937394 intron lilli + chr2L 2937458 intron lilli + chr2L 2937522 intron lilli + chr2L_13_2935001 chr2L_2935001 RAL-907 73 chr2L 3026214 3026244 chr2L 3026873 3026903 9 657 27.5 13.0 20.2 0.4 689 chr2L 3026214 3` UTR CG3542 + chr2L 3026558 3` UTR CG3605 - chr2L 3026903 exon CG3605 - chr2L_9_3025001 chr2L_3025001 RAL-907 74 chr2L 3073016 3073061 chr2L 3078239 3078283 copia 18 5219 3.0 6.0 4.5 3.3 5267 chr2L 3073016 intron toc - chr2L 3075650 intron toc - chr2L 3078283 intron toc - chr2L_18_3075001 chr2L_3075001 RAL-907 75 chr2L 3103719 3103750 chr2L 3103811 3103820 5 90 0.0 5.5 2.8 1.3 101 chr2L 3103719 intron toc - chr2L 3103770 intron toc - chr2L 3103820 intron toc - chr2L_5_3100001 chr2L_3100001 RAL-907 76 chr2L 3108871 3108890 chr2L 3108949 3108987 10 93 2.5 3.0 2.8 2.6 116 chr2L 3108871 intron toc - chr2L 3108929 intron toc - chr2L 3108987 intron toc - chr2L_10_3105001 chr2L_3105001 RAL-907 77 chr2L 3134277 3134291 chr2L 3134373 3134387 7 96 3.5 8.5 6.0 1.0 110 chr2L 3134277 intron toc - chr2L 3134332 intron toc - chr2L 3134387 intron toc - chr2L_7_3130001 chr2L_3130001 RAL-907 78 chr2L 3192193 3192224 chr2L 3192324 3192355 10 130 3.5 3.5 3.5 2.2 162 chr2L 3192193 exon CG34393 - chr2L 3192274 intron CG34393 - chr2L 3192355 intron CG34393 - chr2L_10_3190001 chr2L_3190001 RAL-907 79 chr2L 3200984 3201031 chr2L 3201116 3201169 14 130 3.5 2.5 3.0 3.5 185 chr2L 3200984 intergenic CG34393 - chr2L 3201076 intergenic not near genes chr2L 3201169 intergenic not near genes chr2L_14_3200001 chr2L_3200001 RAL-907 80 chr2L 3202718 3202770 chr2L 3210167 3210219 mdg1 20 7449 2.5 1.5 2.0 6.7 7501 chr2L 3202718 intergenic not near genes chr2L 3206468 intergenic not near genes chr2L 3210219 intergenic CR45336 + chr2L_20_3205001 chr2L_3205001 RAL-907 81 chr2L 3251487 3251524 chr2L 3259062 3259109 springer 11 7583 0.5 6.0 3.2 2.6 7622 chr2L 3251487 intergenic not near genes chr2L 3255298 intergenic not near genes chr2L 3259109 intergenic not near genes chr2L_11_3255001 chr2L_3255001 RAL-907 82 chr2L 3291226 3291268 chr2L 3291326 3291337 11 95 3.5 4.0 3.8 2.3 111 chr2L 3291226 intergenic CG9664 - chr2L 3291282 3` UTR CG9664 - chr2L 3291337 3` UTR CG9664 - chr2L_11_3290001 chr2L_3290001 RAL-907 83 chr2L 3323257 3323267 chr2L 3323374 3323384 7 121 5.0 2.5 3.8 1.5 127 chr2L 3323257 intergenic CG8837 + chr2L 3323320 intergenic CG8837 + chr2L 3323384 intergenic CG8837 + chr2L_7_3320001 chr2L_3320001 RAL-907 84 chr2L 3388584 3388630 chr2L 3388839 3388891 pogo 21 258 4.0 3.0 3.5 4.7 307 chr2L 3388584 intergenic CG42460 - chr2L 3388738 intergenic CG42460 - chr2L 3388891 intergenic CG42460 -,CR44791 + chr2L_21_3385001 chr2L_3385001 RAL-907 85 chr2L 3505529 3505566 chr2L 3505673 3505710 9 144 5.5 8.0 6.8 1.2 181 chr2L 3505529 intron tim - chr2L 3505620 intron tim - chr2L 3505710 intron tim - chr2L_9_3505001 chr2L_3505001 RAL-907 86 chr2L 3582881 3582885 chr2L 3582978 3582982 5 97 1.5 4.0 2.8 1.3 101 chr2L 3582881 intergenic not near genes chr2L 3582932 intergenic not near genes chr2L 3582982 intergenic not near genes chr2L_5_3580001 chr2L_3580001 RAL-907 87 chr2L 3582893 3582908 chr2L 3582977 3583000 7 89 1.5 4.0 2.8 1.8 107 chr2L 3582893 intergenic not near genes chr2L 3582946 intergenic not near genes chr2L 3583000 intergenic not near genes chr2L_7_3580001 chr2L_3580001 RAL-907 88 chr2L 3583786 3583800 chr2L 3583886 3583895 4 100 1.0 2.5 1.8 1.4 109 chr2L 3583786 intergenic not near genes chr2L 3583840 intergenic not near genes chr2L 3583895 intergenic not near genes chr2L_4_3580001 chr2L_3580001 RAL-907 89 chr2L 3603607 3603650 chr2L 3603723 3603766 12 109 2.0 2.5 2.2 3.8 159 chr2L 3603607 intergenic not near genes chr2L 3603686 intergenic not near genes chr2L 3603766 intergenic odd - chr2L_12_3600001 chr2L_3600001 RAL-907 90 chr2L 3634086 3634130 chr2L 3634188 3634232 20 99 5.5 5.0 5.2 3.2 146 chr2L 3634086 intron for - chr2L 3634159 intron for - chr2L 3634232 intron for - chr2L_20_3630001 chr2L_3630001 RAL-907 91 chr2L 3649783 3649792 chr2L 3655005 3655014 copia 6 5220 0.0 7.5 3.8 1.2 5231 chr2L 3649783 intron for - chr2L 3652398 intron for - chr2L 3655014 intron for - chr2L_6_3650001 chr2L_3650001 RAL-907 92 chr2L 3686030 3686057 chr2L 3686138 3686165 4 108 3.0 7.0 5.0 0.7 135 chr2L 3686030 intron CG34340 + chr2L 3686098 intron CG34340 + chr2L 3686165 intron CG34340 + chr2L_4_3685001 chr2L_3685001 RAL-907 93 chr2L 3858854 3858901 chr2L 3858986 3859030 14 131 1.0 4.0 2.5 4.0 176 chr2L 3858854 intergenic not near genes chr2L 3858942 intergenic not near genes chr2L 3859030 intergenic not near genes chr2L_14_3855001 chr2L_3855001 RAL-907 94 chr2L 3891883 3891917 chr2L 3891979 3891984 6 92 4.0 4.0 4.0 1.2 101 chr2L 3891883 intron capu - chr2L 3891934 intron capu - chr2L 3891984 intron capu - chr2L_6_3890001 chr2L_3890001 RAL-907 95 chr2L 3896298 3896317 chr2L 3896397 3896410 5 97 1.5 0.0 0.8 2.8 112 chr2L 3896298 intron capu - chr2L 3896354 intron capu - chr2L 3896410 intron capu - chr2L_5_3895001 chr2L_3895001 RAL-907 96 chr2L 3898784 3898807 chr2L 3899117 3899135 7 332 5.5 3.0 4.2 1.3 351 chr2L 3898784 intron capu - chr2L 3898960 intron capu - chr2L 3899135 intron capu - chr2L_7_3895001 chr2L_3895001 RAL-907 97 chr2L 4037783 4037806 chr2L 4037890 4037913 9 107 5.0 3.0 4.0 1.8 130 chr2L 4037783 intron ed + chr2L 4037848 intron ed + chr2L 4037913 intron ed + chr2L_9_4035001 chr2L_4035001 RAL-907 98 chr2L 4060161 4060199 chr2L 4060257 4060295 7 96 2.0 3.0 2.5 2.0 134 chr2L 4060161 intron ed + chr2L 4060228 intron ed + chr2L 4060295 intron ed + chr2L_7_4060001 chr2L_4060001 RAL-907 99 chr2L 4082868 4082885 chr2L 4082992 4082999 4 121 3.0 1.0 2.0 1.3 131 chr2L 4082868 intron ed + chr2L 4082934 intron ed + chr2L 4082999 intron ed + chr2L_4_4080001 chr2L_4080001 RAL-907 100 chr2L 4088360 4088392 chr2L 4088450 4088491 12 98 7.5 2.5 5.0 2.0 131 chr2L 4088360 intron ed + chr2L 4088426 intron ed + chr2L 4088491 intron ed + chr2L_12_4085001 chr2L_4085001 RAL-907 101 chr2L 4155601 4155609 chr2L 4155862 4155870 5 261 0.0 11.5 5.8 0.7 269 chr2L 4155601 intergenic not near genes chr2L 4155736 intergenic not near genes chr2L 4155870 intergenic not near genes chr2L_5_4155001 chr2L_4155001 RAL-907 102 chr2L 4155611 4155635 chr2L 4155850 4155876 8 251 0.0 8.0 4.0 1.6 265 chr2L 4155611 intergenic not near genes chr2L 4155744 intergenic not near genes chr2L 4155876 intergenic not near genes chr2L_8_4155001 chr2L_4155001 RAL-907 103 chr2L 4160491 4160532 chr2L 4160912 4160963 5 423 3.0 2.0 2.5 1.4 472 chr2L 4160491 intergenic not near genes chr2L 4160727 intergenic not near genes chr2L 4160963 intergenic not near genes chr2L_5_4160001 chr2L_4160001 RAL-907 104 chr2L 4184462 4184506 chr2L 4184801 4184845 4 339 0.5 5.5 3.0 1.0 383 chr2L 4184462 intergenic not near genes chr2L 4184654 intergenic not near genes chr2L 4184845 intergenic not near genes chr2L_4_4180001 chr2L_4180001 RAL-907 105 chr2L 4355460 4355494 chr2L 4355649 4355679 9 189 4.0 6.0 5.0 1.5 219 chr2L 4355460 intergenic not near genes chr2L 4355570 intergenic not near genes chr2L 4355679 intergenic not near genes chr2L_9_4355001 chr2L_4355001 RAL-907 106 chr2L 4562850 4562870 chr2L 4562962 4562982 4 112 6.0 0.0 3.0 1.0 132 chr2L 4562850 intron dp - chr2L 4562916 intron dp - chr2L 4562982 intron dp - chr2L_4_4560001 chr2L_4560001 RAL-907 107 chr2L 4601686 4601731 chr2L 4609147 4609192 mdg1 9 7459 5.0 3.5 4.2 1.7 7506 chr2L 4601686 intron dp - chr2L 4605439 intron dp - chr2L 4609192 intron dp - chr2L_9_4605001 chr2L_4605001 RAL-907 108 chr2L 4649945 4649967 chr2L 4650099 4650121 7 154 6.5 5.0 5.8 1.0 176 chr2L 4649945 intergenic not near genes chr2L 4650033 intergenic not near genes chr2L 4650121 intergenic not near genes chr2L_7_4650001 chr2L_4650001 RAL-907 109 chr2L 4661767 4661795 chr2L 4669515 4669536 opus 8 7752 3.0 1.5 2.2 2.5 7769 chr2L 4661767 intergenic not near genes chr2L 4665652 intergenic not near genes chr2L 4669536 intergenic not near genes chr2L_8_4665001 chr2L_4665001 RAL-907 110 chr2L 4718741 4718748 chr2L 4718856 4718863 4 115 3.0 2.0 2.5 1.1 122 chr2L 4718741 intron CG34351 + chr2L 4718802 intron CG34351 + chr2L 4718863 intron CG34351 + chr2L_4_4715001 chr2L_4715001 RAL-907 111 chr2L 4718749 4718792 chr2L 4718855 4718904 13 112 0.5 2.0 1.2 5.9 155 chr2L 4718749 intron CG34351 + chr2L 4718826 intron CG34351 + chr2L 4718904 intron CG34351 + chr2L_13_4715001 chr2L_4715001 RAL-907 112 chr2L 4793288 4793322 chr2L 4793603 4793637 8 314 2.0 2.0 2.0 2.7 349 chr2L 4793288 intron CG15630 - chr2L 4793462 intron CG15630 - chr2L 4793637 exon CG15630 - chr2L_8_4790001 chr2L_4790001 RAL-907 113 chr2L 4858462 4858485 chr2L 4858556 4858593 4 104 2.5 0.0 1.2 1.8 131 chr2L 4858462 intron pog + chr2L 4858528 intron pog + chr2L 4858593 intron pog + chr2L_4_4855001 chr2L_4855001 RAL-907 114 chr2L 4862284 4862306 chr2L 4862380 4862391 4 93 3.0 2.0 2.5 1.1 107 chr2L 4862284 intron pog + chr2L 4862338 intron pog + chr2L 4862391 intron pog + chr2L_4_4860001 chr2L_4860001 RAL-907 115 chr2L 4885562 4885606 chr2L 4892376 4892420 6 6814 32.0 19.5 25.8 0.2 6858 chr2L 4885562 3` UTR CG3008 + chr2L 4888991 intergenic not near genes chr2L 4892420 5` UTR CG3036 + chr2L_6_4885001 chr2L_4885001 RAL-907 116 chr2L 4892887 4892895 chr2L 4892990 4892998 4 103 0.5 4.0 2.2 1.2 111 chr2L 4892887 intron CG3036 + chr2L 4892942 intron CG3036 + chr2L 4892998 intron CG3036 + chr2L_4_4890001 chr2L_4890001 RAL-907 117 chr2L 4918150 4918180 chr2L 4923243 4923273 jockey 11 5092 9.0 6.0 7.5 1.3 5123 chr2L 4918150 intron hoe1 - chr2L 4920712 intron hoe1 - chr2L 4923273 intron hoe1 - chr2L_11_4920001 chr2L_4920001 RAL-907 118 chr2L 5027956 5027988 chr2L 5028056 5028060 9 96 1.5 6.5 4.0 1.8 104 chr2L 5027956 intron vkg - chr2L 5028008 intron vkg - chr2L 5028060 intron vkg - chr2L_9_5025001 chr2L_5025001 RAL-907 119 chr2L 5092402 5092442 chr2L 5092509 5092549 16 107 2.0 5.0 3.5 3.6 147 chr2L 5092402 intron pgant5 - chr2L 5092476 intron pgant5 - chr2L 5092549 intron pgant5 - chr2L_16_5090001 chr2L_5090001 RAL-907 120 chr2L 5117279 5117314 chr2L 5117381 5117416 7 101 2.5 3.5 3.0 1.8 137 chr2L 5117279 intron Msp300 + chr2L 5117348 intron Msp300 + chr2L 5117416 intron Msp300 + chr2L_7_5115001 chr2L_5115001 RAL-907 121 chr2L 5342771 5342792 chr2L 5345146 5345177 Doc 6 2392 1.0 3.0 2.0 2.0 2406 chr2L 5342771 intergenic not near genes chr2L 5343974 intergenic not near genes chr2L 5345177 intergenic not near genes chr2L_6_5340001 chr2L_5340001 RAL-907 122 chr2L 5392601 5392651 chr2L 5392702 5392740 14 97 3.0 1.5 2.2 4.4 139 chr2L 5392601 intergenic not near genes chr2L 5392670 intergenic not near genes chr2L 5392740 intergenic not near genes chr2L_14_5390001 chr2L_5390001 RAL-907 123 chr2L 5500040 5500079 chr2L 5500146 5500158 10 103 3.0 4.0 3.5 2.2 118 chr2L 5500040 intergenic not near genes chr2L 5500099 intergenic not near genes chr2L 5500158 intergenic not near genes chr2L_10_5500001 chr2L_5500001 RAL-907 124 chr2L 5508523 5508550 chr2L 5508619 5508646 11 95 5.5 5.5 5.5 1.7 123 chr2L 5508523 intergenic not near genes chr2L 5508584 intergenic not near genes chr2L 5508646 intergenic not near genes chr2L_11_5505001 chr2L_5505001 RAL-907 125 chr2L 5516638 5516682 chr2L 5516737 5516781 22 99 4.5 6.0 5.2 3.5 143 chr2L 5516638 intergenic not near genes chr2L 5516710 intergenic not near genes chr2L 5516781 intergenic not near genes chr2L_22_5515001 chr2L_5515001 RAL-907 126 chr2L 5657433 5657440 chr2L 5657581 5657588 4 148 5.0 4.5 4.8 0.7 155 chr2L 5657433 intron CG31646 - chr2L 5657510 intron CG31646 - chr2L 5657588 intron CG31646 - chr2L_4_5655001 chr2L_5655001 RAL-907 127 chr2L 5693179 5693191 chr2L 5694008 5694035 4 838 5.5 5.5 5.5 0.6 856 chr2L 5693179 intergenic not near genes chr2L 5693607 intergenic not near genes chr2L 5694035 intergenic not near genes chr2L_4_5690001 chr2L_5690001 RAL-907 128 chr2L 5762427 5762474 chr2L 5762532 5762579 25 105 7.0 6.0 6.5 3.3 152 chr2L 5762427 intergenic CG11030 +,obst-E - chr2L 5762503 intergenic obst-E -,CG11030 + chr2L 5762579 3` UTR obst-E - chr2L_25_5760001 chr2L_5760001 RAL-907 129 chr2L 5805945 5805991 chr2L 5806350 5806395 9 401 5.0 5.0 5.0 1.5 450 chr2L 5805945 intron CG11034 + chr2L 5806170 intron CG11034 + chr2L 5806395 intron CG11034 + chr2L_9_5805001 chr2L_5805001 RAL-907 130 chr2L 5814682 5814713 chr2L 5814785 5814810 7 102 3.5 4.0 3.8 1.5 128 chr2L 5814682 intergenic not near genes chr2L 5814746 intergenic not near genes chr2L 5814810 intergenic not near genes chr2L_7_5810001 chr2L_5810001 RAL-907 131 chr2L 5819655 5819708 chr2L 5819759 5819812 17 101 5.5 3.0 4.2 3.3 157 chr2L 5819655 intergenic not near genes chr2L 5819734 intergenic not near genes chr2L 5819812 intergenic not near genes chr2L_17_5815001 chr2L_5815001 RAL-907 132 chr2L 5827720 5827741 chr2L 5836717 5836767 roo 8 9017 4.0 2.5 3.2 1.9 9047 chr2L 5827720 intron TrissinR + chr2L 5832244 intron TrissinR + chr2L 5836767 intron TrissinR + chr2L_8_5830001 chr2L_5830001 RAL-907 133 chr2L 5897574 5897625 chr2L 5897677 5897728 14 96 6.0 5.0 5.5 2.2 154 chr2L 5897574 intergenic not near genes chr2L 5897651 intergenic not near genes chr2L 5897728 intergenic not near genes chr2L_14_5895001 chr2L_5895001 RAL-907 134 chr2L 5926253 5926452 chr2L 5926353 5926560 4 140 0.0 0.0 0.0 4.0 307 chr2L 5926253 intron dsf + chr2L 5926406 intron dsf + chr2L 5926560 intron dsf + chr2L_4_5925001 chr2L_5925001 RAL-907 135 chr2L 6050421 6050468 chr2L 6050545 6050592 6 122 5.0 6.0 5.5 0.9 171 chr2L 6050421 3` UTR CG12393 + chr2L 6050506 intergenic CG12393 +,CG9135 + chr2L 6050592 intergenic CG12393 +,CG9135 + chr2L_6_6050001 chr2L_6050001 RAL-907 136 chr2L 6130748 6130770 chr2L 6130853 6130875 10 105 12.0 0.0 6.0 1.4 127 chr2L 6130748 intergenic CG42730 -,tectonic -,CG9222 + chr2L 6130812 intergenic CG42730 -,tectonic -,CG9222 + chr2L 6130875 intergenic CG9222 +,CG42730 -,tectonic - chr2L_10_6130001 chr2L_6130001 RAL-907 137 chr2L 6136533 6136580 chr2L 6136650 6136677 6 114 0.5 5.0 2.8 1.6 144 chr2L 6136533 intergenic not near genes chr2L 6136605 intergenic not near genes chr2L 6136677 intergenic not near genes chr2L_6_6135001 chr2L_6135001 RAL-907 138 chr2L 6151617 6151644 chr2L 6151715 6151733 12 96 7.0 1.0 4.0 2.4 116 chr2L 6151617 intergenic Muc26B + chr2L 6151675 intergenic Muc26B + chr2L 6151733 intergenic Muc26B + chr2L_12_6150001 chr2L_6150001 RAL-907 139 chr2L 6285313 6285364 chr2L 6285890 6285936 9 574 3.0 2.5 2.8 2.4 623 chr2L 6285313 intron Ddr + chr2L 6285624 intron Ddr + chr2L 6285936 intron Ddr + chr2L_9_6285001 chr2L_6285001 RAL-907 140 chr2L 6286379 6286409 chr2L 6286492 6286495 9 108 4.0 5.5 4.8 1.6 116 chr2L 6286379 intron Ddr + chr2L 6286437 intron Ddr + chr2L 6286495 intron Ddr + chr2L_9_6285001 chr2L_6285001 RAL-907 141 chr2L 6308295 6308334 chr2L 6308398 6308437 12 101 4.5 2.5 3.5 2.7 142 chr2L 6308295 intron Ddr + chr2L 6308366 intron Ddr + chr2L 6308437 intron,3` UTR Ddr +,CG43922 - chr2L_12_6305001 chr2L_6305001 RAL-907 142 chr2L 6349297 6349327 chr2L 6349462 6349472 8 164 3.5 6.5 5.0 1.3 175 chr2L 6349297 intergenic CG9498 - chr2L 6349384 intergenic CG9498 - chr2L 6349472 3` UTR CG9498 - chr2L_8_6345001 chr2L_6345001 RAL-907 143 chr2L 6363142 6363158 chr2L 6366088 6366103 Burdock 5 2944 12.0 2.0 7.0 0.6 2961 chr2L 6363142 intergenic not near genes chr2L 6364622 intergenic not near genes chr2L 6366103 intergenic not near genes chr2L_5_6360001 chr2L_6360001 RAL-907 144 chr2L 6363160 6363179 chr2L 6366075 6366124 Burdock 7 2939 8.0 1.0 4.5 1.3 2964 chr2L 6363160 intergenic not near genes chr2L 6364642 intergenic not near genes chr2L 6366124 intergenic not near genes chr2L_7_6360001 chr2L_6360001 RAL-907 145 chr2L 6387876 6387924 chr2L 6387987 6388035 19 111 4.5 5.5 5.0 3.2 159 chr2L 6387876 intron CG42368 - chr2L 6387956 intron CG42368 - chr2L 6388035 intron CG42368 - chr2L_19_6385001 chr2L_6385001 RAL-907 146 chr2L 6426837 6426886 chr2L 6445117 6445157 roo 17 18278 4.0 2.5 3.2 4.0 18320 chr2L 6426837 3` UTR CG9527 - chr2L 6435997 intron CG9527 - chr2L 6445157 exon CG9527 - chr2L_17_6435001 chr2L_6435001 RAL-907 147 chr2L 6544355 6544365 chr2L 6544467 6544477 4 111 9.5 4.0 6.8 0.5 122 chr2L 6544355 intron eya - chr2L 6544416 intron eya - chr2L 6544477 intron eya - chr2L_4_6540001 chr2L_6540001 RAL-907 148 chr2L 6544367 6544392 chr2L 6544462 6544504 13 109 7.5 4.0 5.8 1.9 137 chr2L 6544367 intron eya - chr2L 6544436 intron eya - chr2L 6544504 intron eya - chr2L_13_6540001 chr2L_6540001 RAL-907 149 chr2L 6746092 6746118 chr2L 6746188 6746196 6 92 3.0 5.5 4.2 1.2 104 chr2L 6746092 intron CG11221 + chr2L 6746144 intron CG11221 + chr2L 6746196 intron CG11221 + chr2L_6_6745001 chr2L_6745001 RAL-907 150 chr2L 6771389 6771566 chr2L 6771486 6771690 18 103 0.5 0.5 0.5 12.0 301 chr2L 6771389 intron CG11321 - chr2L 6771540 intron CG11321 - chr2L 6771690 intron CG11321 - chr2L_18_6770001 chr2L_6770001 RAL-907 151 chr2L 6772570 6772596 chr2L 6772672 6772699 4 98 8.0 7.5 7.8 0.5 129 chr2L 6772570 5` UTR CG11321 - chr2L 6772634 5` UTR CG11321 - chr2L 6772699 5` UTR CG11321 - chr2L_4_6770001 chr2L_6770001 RAL-907 152 chr2L 6790396 6790442 chr2L 6790866 6790886 11 465 19.0 16.5 17.8 0.6 490 chr2L 6790396 3` UTR nrv2 - chr2L 6790641 exon nrv2 - chr2L 6790886 exon nrv2 - chr2L_11_6790001 chr2L_6790001 RAL-907 153 chr2L 6788208 6788248 chr2L 6791719 6791759 10 3514 22.5 25.0 23.8 0.4 3551 chr2L 6788208 intergenic not near genes chr2L 6789984 3` UTR nrv2 - chr2L 6791759 exon nrv2 - chr2L_10_6785001 chr2L_6785001 RAL-907 154 chr2L 6799532 6799570 chr2L 6799638 6799678 6 106 0.5 1.0 0.8 3.3 146 chr2L 6799532 5` UTR CR43610 + chr2L 6799605 intergenic CR43610 +,CG17376 - chr2L 6799678 intergenic CR43610 +,CG17376 - chr2L_6_6795001 chr2L_6795001 RAL-907 155 chr2L 6836492 6836531 chr2L 6836594 6836632 17 99 3.0 3.5 3.2 4.0 140 chr2L 6836492 intron sens-2 + chr2L 6836562 intron sens-2 + chr2L 6836632 intron sens-2 + chr2L_17_6835001 chr2L_6835001 RAL-907 156 chr2L 6867748 6867767 chr2L 6867858 6867877 12 109 11.5 14.5 13.0 0.9 129 chr2L 6867748 intron Nha1 - chr2L 6867812 intron Nha1 - chr2L 6867877 intron Nha1 - chr2L_12_6865001 chr2L_6865001 RAL-907 157 chr2L 6867309 6867349 chr2L 6871610 6871655 9 4306 16.0 34.0 25.0 0.3 4346 chr2L 6867309 intron Nha1 - chr2L 6869482 intron Nha1 - chr2L 6871655 intron CR44915 - chr2L_9_6865001 chr2L_6865001 RAL-907 158 chr2L 6876791 6876809 chr2L 6882974 6882985 diver 4 6195 2.5 3.5 3.0 1.0 6194 chr2L 6876791 intron Nlg2 + chr2L 6879888 intron Nlg2 + chr2L 6882985 intron Nlg2 + chr2L_4_6875001 chr2L_6875001 RAL-907 159 chr2L 6950164 6950185 chr2L 6950373 6950410 6 222 4.0 2.0 3.0 1.5 246 chr2L 6950164 5` UTR Gas41 - chr2L 6950287 intergenic Gas41 -,SA + chr2L 6950410 intergenic SA +,Gas41 - chr2L_6_6950001 chr2L_6950001 RAL-907 160 chr2L 7041591 7041625 chr2L 7041700 7041734 7 109 5.0 4.5 4.8 1.2 143 chr2L 7041591 intron milt + chr2L 7041662 intron milt + chr2L 7041734 intron milt + chr2L_7_7040001 chr2L_7040001 RAL-907 161 chr2L 7051151 7051161 chr2L 7051237 7051257 4 94 0.0 0.0 0.0 4.0 106 chr2L 7051151 intron milt + chr2L 7051204 intron milt + chr2L 7051257 intron milt + chr2L_4_7050001 chr2L_7050001 RAL-907 162 chr2L 7125772 7125802 chr2L 7125908 7125936 10 135 4.0 4.5 4.2 1.9 164 chr2L 7125772 intron Pvf3 - chr2L 7125854 intron Pvf3 - chr2L 7125936 intron Pvf3 - chr2L_10_7125001 chr2L_7125001 RAL-907 163 chr2L 7126842 7126874 chr2L 7126941 7126973 12 99 8.0 0.0 4.0 2.4 131 chr2L 7126842 intron Pvf3 - chr2L 7126908 intron Pvf3 - chr2L 7126973 intron Pvf3 - chr2L_12_7125001 chr2L_7125001 RAL-907 164 chr2L 7197975 7198020 chr2L 7198074 7198107 11 97 3.0 5.0 4.0 2.2 132 chr2L 7197975 intron CG4502 - chr2L 7198041 intron CG4502 - chr2L 7198107 intron CG4502 - chr2L_11_7195001 chr2L_7195001 RAL-907 165 chr2L 7399288 7399319 chr2L 7399681 7399702 8 391 0.0 5.0 2.5 2.3 414 chr2L 7399288 intergenic not near genes chr2L 7399495 intergenic not near genes chr2L 7399702 intergenic not near genes chr2L_8_7395001 chr2L_7395001 RAL-907 166 chr2L 7555195 7555234 chr2L 7555292 7555331 11 97 0.0 2.5 1.2 5.0 136 chr2L 7555195 intron RapGAP1 - chr2L 7555263 intron RapGAP1 - chr2L 7555331 intron RapGAP1 - chr2L_11_7555001 chr2L_7555001 RAL-907 167 chr2L 7562167 7562188 chr2L 7562267 7562288 10 100 4.5 10.5 7.5 1.2 121 chr2L 7562167 intron RapGAP1 - chr2L 7562228 intron RapGAP1 - chr2L 7562288 intron RapGAP1 - chr2L_10_7560001 chr2L_7560001 RAL-907 168 chr2L 7567479 7567515 chr2L 7567562 7567612 10 95 2.0 3.5 2.8 2.6 133 chr2L 7567479 intron RapGAP1 - chr2L 7567546 intron RapGAP1 - chr2L 7567612 intron RapGAP1 - chr2L_10_7565001 chr2L_7565001 RAL-907 169 chr2L 7579184 7579209 chr2L 7579395 7579420 BS 11 211 3.0 0.0 1.5 4.4 236 chr2L 7579184 intergenic RapGAP1 - chr2L 7579302 intergenic RapGAP1 - chr2L 7579420 intergenic RapGAP1 - chr2L_11_7575001 chr2L_7575001 RAL-907 170 chr2L 7766642 7766653 chr2L 7766708 7766749 4 78 4.5 0.0 2.2 1.2 107 chr2L 7766642 intergenic not near genes chr2L 7766696 intergenic not near genes chr2L 7766749 intergenic not near genes chr2L_4_7765001 chr2L_7765001 RAL-907 171 chr2L 7781232 7781251 chr2L 7781351 7781355 6 115 8.5 6.0 7.2 0.7 123 chr2L 7781232 exon Uro + chr2L 7781294 3` UTR Uro + chr2L 7781355 3` UTR Uro + chr2L_6_7780001 chr2L_7780001 RAL-907 172 chr2L 7867556 7867580 chr2L 7867670 7867692 5 114 3.5 6.5 5.0 0.8 136 chr2L 7867556 intron Proc - chr2L 7867624 intron Proc - chr2L 7867692 intron Proc - chr2L_5_7865001 chr2L_7865001 RAL-907 173 chr2L 7920711 7920740 chr2L 7920830 7920859 10 117 6.0 3.0 4.5 1.8 148 chr2L 7920711 intron Snoo - chr2L 7920785 intron Snoo - chr2L 7920859 intron Snoo - chr2L_10_7920001 chr2L_7920001 RAL-907 174 chr2L 7959027 7959072 chr2L 7960454 7960504 pogo 6 1430 5.0 0.5 2.8 1.6 1477 chr2L 7959027 intron Snoo - chr2L 7959766 intron Snoo - chr2L 7960504 intron Snoo - chr2L_6_7955001 chr2L_7955001 RAL-907 175 chr2L 7977075 7977108 chr2L 7984063 7984088 297 7 6989 3.5 2.0 2.8 1.8 7013 chr2L 7977075 intron Snoo - chr2L 7980582 intron Snoo - chr2L 7984088 intron,5` UTR Snoo -,CG7231 + chr2L_7_7980001 chr2L_7980001 RAL-907 176 chr2L 8003034 8003061 chr2L 8003136 8003163 11 99 3.0 6.0 4.5 2.0 129 chr2L 8003034 intron Wwox - chr2L 8003098 intron Wwox - chr2L 8003163 intron Wwox - chr2L_11_8000001 chr2L_8000001 RAL-907 177 chr2L 8044077 8044124 chr2L 8044175 8044217 18 95 4.5 5.5 5.0 3.0 140 chr2L 8044077 intron CG7466 + chr2L 8044147 intron CG7466 + chr2L 8044217 intron CG7466 + chr2L_18_8040001 chr2L_8040001 RAL-907 178 chr2L 8164563 8164610 chr2L 8164665 8164708 5 101 3.5 2.5 3.0 1.2 145 chr2L 8164563 intron Piezo + chr2L 8164636 intron Piezo + chr2L 8164708 intron Piezo + chr2L_5_8160001 chr2L_8160001 RAL-907 179 chr2L 8171276 8171298 chr2L 8171371 8171399 10 100 0.5 10.0 5.2 1.6 123 chr2L 8171276 intron Piezo + chr2L 8171338 intron Piezo + chr2L 8171399 intron Piezo + chr2L_10_8170001 chr2L_8170001 RAL-907 180 chr2L 8184898 8184953 chr2L 8185009 8185058 14 107 4.0 2.0 3.0 3.5 160 chr2L 8184898 intron Piezo + chr2L 8184978 intron Piezo + chr2L 8185058 intron Piezo + chr2L_14_8180001 chr2L_8180001 RAL-907 181 chr2L 8230298 8230346 chr2L 8230402 8230410 10 93 2.5 3.5 3.0 2.5 112 chr2L 8230298 5` UTR Pvr - chr2L 8230354 intron Pvr - chr2L 8230410 intron Pvr - chr2L_10_8230001 chr2L_8230001 RAL-907 182 chr2L 8233740 8233762 chr2L 8234301 8234323 6 561 0.0 6.0 3.0 1.5 583 chr2L 8233740 intron Pvr - chr2L 8234032 intron Pvr - chr2L 8234323 intron Pvr - chr2L_6_8230001 chr2L_8230001 RAL-907 183 chr2L 8244714 8244749 chr2L 8244855 8244891 4 140 2.0 2.5 2.2 1.2 177 chr2L 8244714 intron CG8086 - chr2L 8244802 intron CG8086 - chr2L 8244891 intron CG8086 - chr2L_4_8240001 chr2L_8240001 RAL-907 184 chr2L 8278775 8278820 chr2L 8278886 8278922 12 108 3.0 3.0 3.0 3.0 147 chr2L 8278775 intron Btk29A - chr2L 8278848 intron Btk29A - chr2L 8278922 intron Btk29A - chr2L_12_8275001 chr2L_8275001 RAL-907 185 chr2L 8334434 8334486 chr2L 8334532 8334580 8 96 2.5 6.0 4.2 1.5 146 chr2L 8334434 intergenic not near genes chr2L 8334507 intergenic not near genes chr2L 8334580 intergenic not near genes chr2L_8_8330001 chr2L_8330001 RAL-907 186 chr2L 8336925 8336966 chr2L 8337015 8337060 6 96 0.0 2.0 1.0 3.0 135 chr2L 8336925 intergenic not near genes chr2L 8336992 intergenic not near genes chr2L 8337060 intergenic not near genes chr2L_6_8335001 chr2L_8335001 RAL-907 187 chr2L 8349594 8349631 chr2L 8349719 8349744 10 122 0.0 2.0 1.0 5.0 150 chr2L 8349594 exon CG7778 + chr2L 8349669 intron CG7778 + chr2L 8349744 exon CG7778 + chr2L_10_8345001 chr2L_8345001 RAL-907 188 chr2L 8452409 8452450 chr2L 8461599 8461641 roo 6 9191 3.0 5.5 4.2 1.2 9232 chr2L 8452409 intron fu12 - chr2L 8457025 intron fu12 - chr2L 8461641 intron fu12 - chr2L_6_8455001 chr2L_8455001 RAL-907 189 chr2L 8461821 8461871 chr2L 8461922 8461970 11 99 3.0 1.5 2.2 3.4 149 chr2L 8461821 intron fu12 - chr2L 8461896 intron fu12 - chr2L 8461970 intron fu12 - chr2L_11_8460001 chr2L_8460001 RAL-907 190 chr2L 8498192 8498237 chr2L 8498292 8498337 12 101 4.0 4.5 4.2 2.3 145 chr2L 8498192 intron Dh31 - chr2L 8498264 intron Dh31 - chr2L 8498337 intron Dh31 - chr2L_12_8495001 chr2L_8495001 RAL-907 191 chr2L 8594445 8594489 chr2L 8601519 8601563 297 11 7070 6.5 0.0 3.2 2.6 7118 chr2L 8594445 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598004 intron Sema-1a + chr2L 8601563 intron Sema-1a + chr2L_11_8595001 chr2L_8595001 RAL-907 192 chr2L 8723111 8723135 chr2L 8731508 8731532 Tirant 9 8397 3.5 6.0 4.8 1.6 8421 chr2L 8723111 intron raw - chr2L 8727322 intron raw - chr2L 8731532 intron raw - chr2L_9_8725001 chr2L_8725001 RAL-907 193 chr2L 8736248 8736256 chr2L 8736348 8736356 6 99 0.0 4.0 2.0 2.0 108 chr2L 8736248 intron raw - chr2L 8736302 intron raw - chr2L 8736356 intron raw - chr2L_6_8735001 chr2L_8735001 RAL-907 194 chr2L 8789660 8789676 chr2L 8789773 8789789 9 113 4.0 4.5 4.2 1.7 129 chr2L 8789660 intergenic not near genes chr2L 8789724 intergenic not near genes chr2L 8789789 intergenic not near genes chr2L_9_8785001 chr2L_8785001 RAL-907 195 chr2L 8824638 8824655 chr2L 8824728 8824770 6 101 4.0 5.0 4.5 1.1 132 chr2L 8824638 intergenic not near genes chr2L 8824704 intergenic not near genes chr2L 8824770 intergenic not near genes chr2L_6_8820001 chr2L_8820001 RAL-907 196 chr2L 8956203 8956237 chr2L 8956300 8956334 8 97 1.5 0.0 0.8 4.4 131 chr2L 8956203 intron CG31886 - chr2L 8956268 intron CG31886 - chr2L 8956334 intron CG31886 - chr2L_8_8955001 chr2L_8955001 RAL-907 197 chr2L 8959478 8959506 chr2L 8959644 8959672 4 166 0.0 2.5 1.2 1.8 194 chr2L 8959478 3` UTR CG9525 - chr2L 8959575 3` UTR CG9525 - chr2L 8959672 3` UTR CG9525 - chr2L_4_8955001 chr2L_8955001 RAL-907 198 chr2L 9000265 9000300 chr2L 9007795 9007826 roo 17 7528 6.5 6.5 6.5 2.3 7561 chr2L 9000265 intergenic Try29F + chr2L 9004046 intergenic not near genes chr2L 9007826 intergenic not near genes chr2L_17_9000001 chr2L_9000001 RAL-907 199 chr2L 9000304 9000310 chr2L 9007793 9007840 roo 6 7517 5.0 6.5 5.8 0.9 7536 chr2L 9000304 intergenic Try29F + chr2L 9004072 intergenic not near genes chr2L 9007840 intergenic not near genes chr2L_6_9000001 chr2L_9000001 RAL-907 200 chr2L 9040009 9040060 chr2L 9040116 9040167 15 103 0.0 3.5 1.8 5.4 158 chr2L 9040009 intergenic not near genes chr2L 9040088 intergenic not near genes chr2L 9040167 intergenic not near genes chr2L_15_9040001 chr2L_9040001 RAL-907 201 chr2L 9053393 9053429 chr2L 9053648 9053683 16 254 2.5 0.0 1.2 7.3 290 chr2L 9053393 exon CG31708 - chr2L 9053538 intron CG31708 - chr2L 9053683 intron CG31708 - chr2L_16_9050001 chr2L_9050001 RAL-907 202 chr2L 9069663 9069678 chr2L 9069774 9069789 7 111 0.0 0.0 0.0 7.0 126 chr2L 9069663 intron CG31708 - chr2L 9069726 intron CG31708 - chr2L 9069789 intron CG31708 - chr2L_7_9065001 chr2L_9065001 RAL-907 203 chr2L 9116582 9116628 chr2L 9116711 9116751 8 127 3.0 1.5 2.2 2.5 169 chr2L 9116582 intergenic not near genes chr2L 9116666 intergenic not near genes chr2L 9116751 intergenic not near genes chr2L_8_9115001 chr2L_9115001 RAL-907 204 chr2L 9123353 9123391 chr2L 9123455 9123494 4 102 0.0 0.0 0.0 4.0 141 chr2L 9123353 intergenic not near genes chr2L 9123424 intergenic not near genes chr2L 9123494 intergenic not near genes chr2L_4_9120001 chr2L_9120001 RAL-907 205 chr2L 9139014 9139036 chr2L 9139085 9139137 9 92 1.5 2.5 2.0 3.0 123 chr2L 9139014 intron CG32982 + chr2L 9139076 intron CG32982 + chr2L 9139137 intron CG32982 + chr2L_9_9135001 chr2L_9135001 RAL-907 206 chr2L 9158773 9158786 chr2L 9158890 9158903 5 117 8.5 0.0 4.2 1.0 130 chr2L 9158773 intron CG32982 + chr2L 9158838 intron CG32982 + chr2L 9158903 intron CG32982 + chr2L_5_9155001 chr2L_9155001 RAL-907 207 chr2L 9173053 9173095 chr2L 9173150 9173180 11 96 5.0 1.5 3.2 2.6 127 chr2L 9173053 intron tai + chr2L 9173116 intron tai + chr2L 9173180 intron tai + chr2L_11_9170001 chr2L_9170001 RAL-907 208 chr2L 9202036 9202085 chr2L 9202132 9202170 8 76 2.0 3.5 2.8 2.1 134 chr2L 9202036 intron tai + chr2L 9202103 intron tai + chr2L 9202170 intron tai + chr2L_8_9200001 chr2L_9200001 RAL-907 209 chr2L 9217962 9217996 chr2L 9222765 9222802 Doc 11 4805 8.5 5.0 6.8 1.4 4840 chr2L 9217962 intron tai + chr2L 9220382 intron tai + chr2L 9222802 intron tai + chr2L_11_9220001 chr2L_9220001 RAL-907 210 chr2L 9225833 9225879 chr2L 9225943 9225952 22 107 6.0 3.0 4.5 4.0 119 chr2L 9225833 intron tai + chr2L 9225892 intron tai + chr2L 9225952 intron tai + chr2L_22_9225001 chr2L_9225001 RAL-907 211 chr2L 9251125 9251178 chr2L 9251242 9251280 9 106 7.0 3.0 5.0 1.5 155 chr2L 9251125 intergenic aust -,borr - chr2L 9251202 intergenic aust -,borr - chr2L 9251280 intergenic borr -,aust - chr2L_9_9250001 chr2L_9250001 RAL-907 212 chr2L 9279971 9280020 chr2L 9280083 9280134 10 110 0.0 3.5 1.8 3.6 163 chr2L 9279971 intron Ggamma30A + chr2L 9280052 intron Ggamma30A + chr2L 9280134 intron Ggamma30A + chr2L_10_9280001 chr2L_9280001 RAL-907 213 chr2L 9297365 9297394 chr2L 9297462 9297491 8 97 3.0 7.5 5.2 1.3 126 chr2L 9297365 3` UTR Ggamma30A + chr2L 9297428 3` UTR Ggamma30A + chr2L 9297491 3` UTR Ggamma30A + chr2L_8_9295001 chr2L_9295001 RAL-907 214 chr2L 9303498 9303509 chr2L 9303598 9303609 6 100 9.5 4.0 6.8 0.8 111 chr2L 9303498 intergenic not near genes chr2L 9303554 intergenic not near genes chr2L 9303609 intergenic not near genes chr2L_6_9300001 chr2L_9300001 RAL-907 215 chr2L 9303510 9303550 chr2L 9303597 9303604 9 89 4.5 3.5 4.0 1.8 94 chr2L 9303510 intergenic not near genes chr2L 9303557 intergenic not near genes chr2L 9303604 intergenic not near genes chr2L_9_9300001 chr2L_9300001 RAL-907 216 chr2L 9305362 9305396 chr2L 9305768 9305802 4 406 3.0 1.0 2.0 1.3 440 chr2L 9305362 intergenic CR42844 - chr2L 9305582 intergenic not near genes chr2L 9305802 intergenic not near genes chr2L_4_9305001 chr2L_9305001 RAL-907 217 chr2L 9380227 9380254 chr2L 9380342 9380369 11 115 4.5 1.5 3.0 2.8 142 chr2L 9380227 exon Shawl - chr2L 9380298 intron Shawl - chr2L 9380369 intron Shawl - chr2L_11_9380001 chr2L_9380001 RAL-907 218 chr2L 9391652 9391701 chr2L 9391759 9391808 11 106 2.0 3.0 2.5 3.1 156 chr2L 9391652 intron Shawl - chr2L 9391730 intron Shawl - chr2L 9391808 intron Shawl - chr2L_11_9390001 chr2L_9390001 RAL-907 219 chr2L 9393476 9393528 chr2L 9396463 9396515 jockey 23 2984 0.5 2.5 1.5 9.2 3039 chr2L 9393476 intron Shawl - chr2L 9394996 intron Shawl - chr2L 9396515 intron Shawl - chr2L_23_9390001 chr2L_9390001 RAL-907 220 chr2L 9396922 9396953 chr2L 9397212 9397224 5 276 34.5 24.5 29.5 0.2 302 chr2L 9396922 intron Shawl - chr2L 9397073 intron,3` UTR Shawl -,CG4438 - chr2L 9397224 intron,exon Shawl -,CG4438 - chr2L_5_9395001 chr2L_9395001 RAL-907 221 chr2L 9441309 9441351 chr2L 9441432 9441475 9 120 4.0 2.5 3.2 2.1 166 chr2L 9441309 intron numb + chr2L 9441392 intron numb + chr2L 9441475 intron numb + chr2L_9_9440001 chr2L_9440001 RAL-907 222 chr2L 9451032 9451068 chr2L 9451155 9451182 5 112 0.0 3.5 1.8 1.8 150 chr2L 9451032 intron numb + chr2L 9451107 intron numb + chr2L 9451182 intron numb + chr2L_5_9450001 chr2L_9450001 RAL-907 223 chr2L 9454974 9455007 chr2L 9455096 9455129 10 121 4.5 1.5 3.0 2.5 155 chr2L 9454974 intron numb + chr2L 9455052 intron numb + chr2L 9455129 intron numb + chr2L_10_9455001 chr2L_9455001 RAL-907 224 chr2L 9474764 9474810 chr2L 9474878 9474924 11 114 2.0 4.5 3.2 2.6 160 chr2L 9474764 intergenic not near genes chr2L 9474844 intergenic not near genes chr2L 9474924 intergenic not near genes chr2L_11_9470001 chr2L_9470001 RAL-907 225 chr2L 9493234 9493276 chr2L 9493338 9493363 7 92 1.0 3.0 2.0 2.3 129 chr2L 9493234 intron Gdi - chr2L 9493298 intron Gdi - chr2L 9493363 intron Gdi - chr2L_7_9490001 chr2L_9490001 RAL-907 226 chr2L 9567694 9567734 chr2L 9567790 9567801 15 89 5.0 7.0 6.0 2.1 107 chr2L 9567694 intergenic CR44149 - chr2L 9567748 intergenic CR44149 - chr2L 9567801 intergenic CR44149 - chr2L_15_9565001 chr2L_9565001 RAL-907 227 chr2L 9619606 9619655 chr2L 9619711 9619755 8 101 0.0 0.5 0.2 6.7 149 chr2L 9619606 intron GlcAT-S + chr2L 9619680 intron GlcAT-S + chr2L 9619755 intron GlcAT-S + chr2L_8_9615001 chr2L_9615001 RAL-907 228 chr2L 9719756 9719777 chr2L 9719859 9719879 7 101 0.0 0.5 0.2 5.8 123 chr2L 9719756 intron Nckx30C - chr2L 9719818 intron Nckx30C - chr2L 9719879 intron Nckx30C - chr2L_7_9715001 chr2L_9715001 RAL-907 229 chr2L 9770762 9770799 chr2L 9770879 9770886 1360 8 110 3.0 7.5 5.2 1.3 124 chr2L 9770762 intron ppk18 - chr2L 9770824 intron ppk18 - chr2L 9770886 exon ppk18 - chr2L_8_9770001 chr2L_9770001 RAL-907 230 chr2L 9775976 9776011 chr2L 9776078 9776107 14 101 7.5 5.0 6.2 1.9 131 chr2L 9775976 intergenic not near genes chr2L 9776042 intergenic not near genes chr2L 9776107 intergenic not near genes chr2L_14_9775001 chr2L_9775001 RAL-907 231 chr2L 9837432 9837445 chr2L 9837523 9837542 6 97 2.5 5.0 3.8 1.2 110 chr2L 9837432 intron nAChRalpha6 - chr2L 9837487 intron nAChRalpha6 - chr2L 9837542 intron nAChRalpha6 - chr2L_6_9835001 chr2L_9835001 RAL-907 232 chr2L 9881014 9881035 chr2L 9881111 9881133 4 98 2.0 5.5 3.8 0.8 119 chr2L 9881014 intron nAChRalpha6 - chr2L 9881074 intron nAChRalpha6 - chr2L 9881133 intron nAChRalpha6 - chr2L_4_9880001 chr2L_9880001 RAL-907 233 chr2L 9892486 9892535 chr2L 9892582 9892631 17 95 2.5 2.0 2.2 5.3 145 chr2L 9892486 intron mtDNA-helicase - chr2L 9892558 intron mtDNA-helicase - chr2L 9892631 exon mtDNA-helicase - chr2L_17_9890001 chr2L_9890001 RAL-907 234 chr2L 9973742 9973758 chr2L 9980845 9980878 HMS-Beagle 8 7122 2.5 4.0 3.2 1.9 7136 chr2L 9973742 intergenic not near genes chr2L 9977310 intergenic not near genes chr2L 9980878 intergenic not near genes chr2L_8_9975001 chr2L_9975001 RAL-907 235 chr2L 9982195 9982220 chr2L 9982318 9982343 9 122 0.5 6.5 3.5 2.0 148 chr2L 9982195 intergenic not near genes chr2L 9982269 intergenic not near genes chr2L 9982343 intergenic not near genes chr2L_9_9980001 chr2L_9980001 RAL-907 236 chr2L 9986343 9986371 chr2L 9986444 9986447 5 97 2.5 3.5 3.0 1.2 104 chr2L 9986343 intron bib + chr2L 9986395 intron bib + chr2L 9986447 intron bib + chr2L_5_9985001 chr2L_9985001 RAL-907 237 chr2L 10051727 10051752 chr2L 10051820 10051848 4 99 2.0 3.5 2.8 1.1 121 chr2L 10051727 5` UTR CR44874 + chr2L 10051788 5` UTR CR44874 + chr2L 10051848 5` UTR CR44874 + chr2L_4_10050001 chr2L_10050001 RAL-907 238 chr2L 10095609 10095663 chr2L 10095709 10095763 15 98 2.5 2.5 2.5 4.3 154 chr2L 10095609 intron CG44153 - chr2L 10095686 intron CG44153 - chr2L 10095763 intron CG44153 - chr2L_15_10095001 chr2L_10095001 RAL-907 239 chr2L 10136250 10136271 chr2L 10136322 10136373 8 94 1.5 2.0 1.8 2.9 123 chr2L 10136250 intron CG44153 - chr2L 10136312 intron CG44153 - chr2L 10136373 intron CG44153 - chr2L_8_10135001 chr2L_10135001 RAL-907 240 chr2L 10152101 10152119 chr2L 10152464 10152498 8 374 4.5 2.5 3.5 1.8 397 chr2L 10152101 intron,intron CG44153 -,CG4839 + chr2L 10152300 intron,intron CG44153 -,CG4839 + chr2L 10152498 intron,intron CG44153 -,CG4839 + chr2L_8_10150001 chr2L_10150001 RAL-907 241 chr2L 10152121 10152130 chr2L 10152463 10152504 8 368 3.5 2.5 3.0 2.0 383 chr2L 10152121 intron,intron CG44153 -,CG4839 + chr2L 10152312 intron,intron CG44153 -,CG4839 + chr2L 10152504 intron,intron CG44153 -,CG4839 + chr2L_8_10150001 chr2L_10150001 RAL-907 242 chr2L 10156307 10156346 chr2L 10163797 10163814 blood 4 7475 5.5 5.0 5.2 0.6 7507 chr2L 10156307 intron,3` UTR CG44153 -,CG4839 + chr2L 10160060 intron CG44153 - chr2L 10163814 intron CG44153 - chr2L_4_10160001 chr2L_10160001 RAL-907 243 chr2L 10171150 10171181 chr2L 10171268 10171299 10 117 2.0 1.0 1.5 4.0 149 chr2L 10171150 intron CG44153 - chr2L 10171224 intron CG44153 - chr2L 10171299 intron CG44153 - chr2L_10_10170001 chr2L_10170001 RAL-907 244 chr2L 10209840 10209857 chr2L 10209937 10209954 8 97 6.5 7.5 7.0 1.0 114 chr2L 10209840 intergenic CG5727 -,CR44845 +,CG5731 - chr2L 10209897 3` UTR CG5727 - chr2L 10209954 3` UTR CG5727 - chr2L_8_10205001 chr2L_10205001 RAL-907 245 chr2L 10258411 10258439 chr2L 10258516 10258544 12 104 2.5 2.5 2.5 3.4 133 chr2L 10258411 intron Pten - chr2L 10258478 intron Pten - chr2L 10258544 intron Pten - chr2L_12_10255001 chr2L_10255001 RAL-907 246 chr2L 10458194 10458211 chr2L 10458310 10458327 5 116 0.0 4.5 2.2 1.6 133 chr2L 10458194 intron LM408 + chr2L 10458260 intron LM408 + chr2L 10458327 intron LM408 + chr2L_5_10455001 chr2L_10455001 RAL-907 247 chr2L 10474365 10474414 chr2L 10474466 10474481 4 82 3.0 2.0 2.5 1.1 116 chr2L 10474365 intergenic RluA-1 - chr2L 10474423 intergenic RluA-1 - chr2L 10474481 intergenic RluA-1 - chr2L_4_10470001 chr2L_10470001 RAL-907 248 chr2L 10480291 10480326 chr2L 10480389 10480422 5 98 3.5 0.0 1.8 1.8 131 chr2L 10480291 intron RluA-2 + chr2L 10480356 intron RluA-2 + chr2L 10480422 intron RluA-2 + chr2L_5_10480001 chr2L_10480001 RAL-907 249 chr2L 10515351 10515391 chr2L 10515459 10515503 16 110 3.0 5.5 4.2 3.1 152 chr2L 10515351 intron,intron CG45083 -,Fatp - chr2L 10515427 intron,intron CG45083 -,Fatp - chr2L 10515503 intron,intron CG45083 -,Fatp - chr2L_16_10515001 chr2L_10515001 RAL-907 250 chr2L 10563894 10563948 chr2L 10564007 10564015 8 100 1.0 1.5 1.2 3.6 121 chr2L 10563894 intron Trim9 + chr2L 10563954 intron Trim9 + chr2L 10564015 intron Trim9 + chr2L_8_10560001 chr2L_10560001 RAL-907 251 chr2L 10580772 10580804 chr2L 10580872 10580884 6 97 2.5 1.0 1.8 2.1 112 chr2L 10580772 intron Trim9 + chr2L 10580828 intron Trim9 + chr2L 10580884 intron Trim9 + chr2L_6_10580001 chr2L_10580001 RAL-907 252 chr2L 10592821 10592869 chr2L 10600502 10600551 opus 9 7681 1.0 3.0 2.0 3.0 7730 chr2L 10592821 intron Trim9 + chr2L 10596686 intron Trim9 + chr2L 10600551 intron Trim9 + chr2L_9_10595001 chr2L_10595001 RAL-907 253 chr2L 10628077 10628125 chr2L 10628186 10628233 16 108 2.0 2.0 2.0 5.3 156 chr2L 10628077 intergenic Trim9 + chr2L 10628155 intergenic Trim9 + chr2L 10628233 intergenic Trim9 + chr2L_16_10625001 chr2L_10625001 RAL-907 254 chr2L 10631228 10631247 chr2L 10631339 10631358 4 111 11.5 0.0 5.8 0.6 130 chr2L 10631228 intron CG7329 - chr2L 10631293 intron CG7329 - chr2L 10631358 intron CG7329 - chr2L_4_10630001 chr2L_10630001 RAL-907 255 chr2L 10723517 10723546 chr2L 10723631 10723660 7 114 6.0 4.0 5.0 1.2 143 chr2L 10723517 intergenic not near genes chr2L 10723588 intergenic not near genes chr2L 10723660 intergenic not near genes chr2L_7_10720001 chr2L_10720001 RAL-907 256 chr2L 10782259 10782285 chr2L 10782694 10782726 9 437 2.0 7.5 4.8 1.6 467 chr2L 10782259 intron CG31869 - chr2L 10782492 intron CG31869 - chr2L 10782726 intron CG31869 - chr2L_9_10780001 chr2L_10780001 RAL-907 257 chr2L 10787998 10788027 chr2L 10788087 10788123 5 95 0.5 6.0 3.2 1.2 125 chr2L 10787998 intron CG31869 - chr2L 10788060 intron CG31869 - chr2L 10788123 intron CG31869 - chr2L_5_10785001 chr2L_10785001 RAL-907 258 chr2L 10811514 10811567 chr2L 10811926 10811939 10 396 1.0 6.0 3.5 2.2 425 chr2L 10811514 intron Nos - chr2L 10811726 intron Nos - chr2L 10811939 intron Nos - chr2L_10_10810001 chr2L_10810001 RAL-907 259 chr2L 10836312 10836356 chr2L 10836412 10836457 18 100 3.5 2.5 3.0 4.5 145 chr2L 10836312 intron Nos - chr2L 10836384 intron Nos - chr2L 10836457 intron Nos - chr2L_18_10835001 chr2L_10835001 RAL-907 260 chr2L 10852152 10852180 chr2L 10852261 10852289 11 109 5.0 9.0 7.0 1.4 137 chr2L 10852152 intron CG43129 + chr2L 10852220 intron CG43129 + chr2L 10852289 intron CG43129 + chr2L_11_10850001 chr2L_10850001 RAL-907 261 chr2L 10862846 10862874 chr2L 10864461 10864468 Rt1c 6 1615 3.0 6.0 4.5 1.1 1622 chr2L 10862846 3` UTR CR43807 - chr2L 10863657 intron CR43807 - chr2L 10864468 3` UTR CR43807 - chr2L_6_10860001 chr2L_10860001 RAL-907 262 chr2L 10903182 10903208 chr2L 10903370 10903396 6 188 2.0 1.0 1.5 2.4 214 chr2L 10903182 intergenic not near genes chr2L 10903289 intergenic CR45724 - chr2L 10903396 intergenic CR45724 - chr2L_6_10900001 chr2L_10900001 RAL-907 263 chr2L 10945069 10945092 chr2L 10945348 10945371 4 279 2.0 4.5 3.2 1.0 302 chr2L 10945069 intron dpr2 - chr2L 10945220 intron dpr2 - chr2L 10945371 intron dpr2 - chr2L_4_10945001 chr2L_10945001 RAL-907 264 chr2L 10946943 10946973 chr2L 10956169 10956195 roo 8 9229 2.5 6.5 4.5 1.5 9252 chr2L 10946943 intron dpr2 - chr2L 10951569 intron dpr2 - chr2L 10956195 intron dpr2 - chr2L_8_10950001 chr2L_10950001 RAL-907 265 chr2L 11189229 11189246 chr2L 11189346 11189363 9 117 6.0 0.0 3.0 2.2 134 chr2L 11189229 intron Ca-beta - chr2L 11189296 intron Ca-beta - chr2L 11189363 intron Ca-beta - chr2L_9_11185001 chr2L_11185001 RAL-907 266 chr2L 11281913 11281934 chr2L 11282010 11282031 5 97 9.5 1.5 5.5 0.8 118 chr2L 11281913 3` UTR Ppt2 + chr2L 11281972 intergenic Ppt2 +,mre11 + chr2L 11282031 intergenic mre11 +,Ppt2 + chr2L_5_11280001 chr2L_11280001 RAL-907 267 chr2L 11292367 11292408 chr2L 11292459 11292510 7 100 3.5 3.5 3.5 1.6 143 chr2L 11292367 intergenic not near genes chr2L 11292438 intergenic not near genes chr2L 11292510 intergenic not near genes chr2L_7_11290001 chr2L_11290001 RAL-907 268 chr2L 11298803 11298853 chr2L 11298900 11298950 15 96 1.5 5.0 3.2 3.6 147 chr2L 11298803 intergenic not near genes chr2L 11298876 intergenic not near genes chr2L 11298950 intergenic not near genes chr2L_15_11295001 chr2L_11295001 RAL-907 269 chr2L 11308986 11309036 chr2L 11309114 11309163 10 125 3.5 0.5 2.0 3.3 177 chr2L 11308986 intergenic not near genes chr2L 11309074 intergenic not near genes chr2L 11309163 intergenic not near genes chr2L_10_11305001 chr2L_11305001 RAL-907 270 chr2L 11364465 11364507 chr2L 11364561 11364592 8 91 2.0 4.0 3.0 2.0 127 chr2L 11364465 intron salr + chr2L 11364528 intron salr + chr2L 11364592 intron salr + chr2L_8_11360001 chr2L_11360001 RAL-907 271 chr2L 11399522 11399529 chr2L 11399618 11399626 4 97 1.0 0.0 0.5 2.7 104 chr2L 11399522 intergenic not near genes chr2L 11399574 intergenic not near genes chr2L 11399626 intergenic not near genes chr2L_4_11395001 chr2L_11395001 RAL-907 272 chr2L 11458927 11458976 chr2L 11459062 11459112 19 135 4.5 2.5 3.5 4.2 185 chr2L 11458927 intergenic not near genes chr2L 11459020 intergenic not near genes chr2L 11459112 intergenic not near genes chr2L_19_11455001 chr2L_11455001 RAL-907 273 chr2L 11485275 11485314 chr2L 11485708 11485747 5 430 1.5 3.0 2.2 1.6 472 chr2L 11485275 exon,5` UTR CG43355 +,sala + chr2L 11485511 exon,5` UTR CG43355 +,sala + chr2L 11485747 3` UTR,5` UTR CG43355 +,sala + chr2L_5_11485001 chr2L_11485001 RAL-907 274 chr2L 11536698 11536736 chr2L 11536799 11536834 4 100 1.5 0.0 0.8 2.2 136 chr2L 11536698 exon CG43438 + chr2L 11536766 3` UTR CG43438 + chr2L 11536834 3` UTR CG43438 + chr2L_4_11535001 chr2L_11535001 RAL-907 275 chr2L 11537970 11538000 chr2L 11538072 11538113 4 109 3.5 4.5 4.0 0.8 143 chr2L 11537970 intergenic not near genes chr2L 11538042 intergenic not near genes chr2L 11538113 intergenic not near genes chr2L_4_11535001 chr2L_11535001 RAL-907 276 chr2L 11540566 11540615 chr2L 11547991 11548037 Tabor 7 7421 3.5 4.5 4.0 1.4 7471 chr2L 11540566 intergenic not near genes chr2L 11544302 intergenic not near genes chr2L 11548037 intergenic not near genes chr2L_7_11540001 chr2L_11540001 RAL-907 277 chr2L 11555390 11555420 chr2L 11555530 11555559 4 140 5.0 3.0 4.0 0.8 169 chr2L 11555390 intergenic not near genes chr2L 11555474 intergenic not near genes chr2L 11555559 intergenic not near genes chr2L_4_11555001 chr2L_11555001 RAL-907 278 chr2L 11563620 11563630 chr2L 11568843 11568849 copia 8 5223 8.0 0.0 4.0 1.6 5229 chr2L 11563620 intergenic not near genes chr2L 11566234 intergenic not near genes chr2L 11568849 intergenic not near genes chr2L_8_11565001 chr2L_11565001 RAL-907 279 chr2L 11576770 11576795 chr2L 11577892 11577919 9 1117 27.5 29.0 28.2 0.3 1149 chr2L 11576770 intergenic not near genes chr2L 11577344 intergenic not near genes chr2L 11577919 intergenic not near genes chr2L_9_11575001 chr2L_11575001 RAL-907 280 chr2L 11675574 11675583 chr2L 11675674 11675683 5 100 2.5 1.5 2.0 1.7 109 chr2L 11675574 intergenic not near genes chr2L 11675628 intergenic not near genes chr2L 11675683 intergenic not near genes chr2L_5_11675001 chr2L_11675001 RAL-907 281 chr2L 11713491 11713537 chr2L 11720975 11721025 blood 9 7486 3.0 4.0 3.5 2.0 7534 chr2L 11713491 intergenic not near genes chr2L 11717258 intergenic not near genes chr2L 11721025 intergenic CR44143 + chr2L_9_11715001 chr2L_11715001 RAL-907 282 chr2L 11765056 11765102 chr2L 11765433 11765479 9 377 3.5 5.5 4.5 1.6 423 chr2L 11765056 intergenic not near genes chr2L 11765268 intergenic not near genes chr2L 11765479 intergenic not near genes chr2L_9_11765001 chr2L_11765001 RAL-907 283 chr2L 11770579 11770626 chr2L 11770686 11770733 8 102 7.5 1.5 4.5 1.5 154 chr2L 11770579 intergenic not near genes chr2L 11770656 intergenic not near genes chr2L 11770733 intergenic not near genes chr2L_8_11770001 chr2L_11770001 RAL-907 284 chr2L 11825686 11825701 chr2L 11825785 11825800 8 98 4.0 0.0 2.0 2.7 114 chr2L 11825686 intron Pde1c - chr2L 11825743 intron Pde1c - chr2L 11825800 intron Pde1c - chr2L_8_11825001 chr2L_11825001 RAL-907 285 chr2L 11870951 11870978 chr2L 11871048 11871072 6 95 1.5 6.5 4.0 1.2 121 chr2L 11870951 intron Pde1c - chr2L 11871012 intron Pde1c - chr2L 11871072 intron Pde1c - chr2L_6_11870001 chr2L_11870001 RAL-907 286 chr2L 11886435 11886449 chr2L 11886554 11886568 4 119 12.0 2.0 7.0 0.5 133 chr2L 11886435 intron Pde1c - chr2L 11886502 intron Pde1c - chr2L 11886568 intron Pde1c - chr2L_4_11885001 chr2L_11885001 RAL-907 287 chr2L 12031380 12031419 chr2L 12031481 12031520 12 101 4.5 7.5 6.0 1.7 140 chr2L 12031380 intron dmGlut + chr2L 12031450 intron dmGlut + chr2L 12031520 intron dmGlut + chr2L_12_12030001 chr2L_12030001 RAL-907 288 chr2L 12058166 12058212 chr2L 12058269 12058315 8 102 1.5 4.0 2.8 2.1 149 chr2L 12058166 exon,3` UTR CG34164 +,RpL7-like + chr2L 12058240 3` UTR,3` UTR CG34164 +,RpL7-like + chr2L 12058315 3` UTR Rab3-GAP - chr2L_8_12055001 chr2L_12055001 RAL-907 289 chr2L 12067318 12067355 chr2L 12074389 12074427 297 15 7072 4.0 3.0 3.5 3.3 7109 chr2L 12067318 intergenic not near genes chr2L 12070872 intergenic not near genes chr2L 12074427 intergenic not near genes chr2L_15_12070001 chr2L_12070001 RAL-907 290 chr2L 12132705 12132735 chr2L 12132811 12132841 9 105 0.0 3.0 1.5 3.6 136 chr2L 12132705 intron rho-6 - chr2L 12132773 intron rho-6 - chr2L 12132841 intron rho-6 - chr2L_9_12130001 chr2L_12130001 RAL-907 291 chr2L 12157606 12157640 chr2L 12157694 12157740 8 91 1.5 2.0 1.8 2.9 134 chr2L 12157606 intron CG31760 + chr2L 12157673 intron CG31760 + chr2L 12157740 intron CG31760 + chr2L_8_12155001 chr2L_12155001 RAL-907 292 chr2L 12158500 12158543 chr2L 12158705 12158750 9 203 2.5 3.0 2.8 2.4 250 chr2L 12158500 intron CG31760 + chr2L 12158625 intron CG31760 + chr2L 12158750 intron CG31760 + chr2L_9_12155001 chr2L_12155001 RAL-907 293 chr2L 12176217 12176243 chr2L 12176306 12176344 4 96 2.0 4.5 3.2 1.0 127 chr2L 12176217 intron,intron aret +,atilla - chr2L 12176280 intron,intron aret +,atilla - chr2L 12176344 intron,intron aret +,atilla - chr2L_4_12175001 chr2L_12175001 RAL-907 294 chr2L 12179664 12179696 chr2L 12179777 12179809 6 113 2.5 5.0 3.8 1.2 145 chr2L 12179664 intron aret + chr2L 12179736 intron aret + chr2L 12179809 intron aret + chr2L_6_12175001 chr2L_12175001 RAL-907 295 chr2L 12255906 12255922 chr2L 12256092 12256108 5 186 0.0 6.5 3.2 1.2 202 chr2L 12255906 intron aret + chr2L 12256007 intron aret + chr2L 12256108 intron aret + chr2L_5_12255001 chr2L_12255001 RAL-907 296 chr2L 12274404 12274444 chr2L 12274725 12274763 4 319 4.0 2.5 3.2 1.0 359 chr2L 12274404 intron aret + chr2L 12274584 intron aret + chr2L 12274763 intron aret + chr2L_4_12270001 chr2L_12270001 RAL-907 297 chr2L 12305390 12305428 chr2L 12305498 12305519 12 101 3.0 0.0 1.5 4.8 129 chr2L 12305390 intron aret + chr2L 12305454 intron aret + chr2L 12305519 intron aret + chr2L_12_12305001 chr2L_12305001 RAL-907 298 chr2L 12363165 12363193 chr2L 12363273 12363295 10 107 0.0 1.5 0.8 5.6 130 chr2L 12363165 intron bru-2 + chr2L 12363230 intron bru-2 + chr2L 12363295 intron bru-2 + chr2L_10_12360001 chr2L_12360001 RAL-907 299 chr2L 12424347 12424360 chr2L 12424443 12424456 6 96 0.0 6.5 3.2 1.4 109 chr2L 12424347 intergenic not near genes chr2L 12424402 intergenic not near genes chr2L 12424456 intergenic CG6405 + chr2L_6_12420001 chr2L_12420001 RAL-907 300 chr2L 12490076 12490111 chr2L 12490235 12490270 5 159 4.0 6.5 5.2 0.8 194 chr2L 12490076 intron bun - chr2L 12490173 intron bun - chr2L 12490270 intron bun - chr2L_5_12490001 chr2L_12490001 RAL-907 301 chr2L 12529232 12529263 chr2L 12529381 12529435 13 167 3.5 4.0 3.8 2.7 203 chr2L 12529232 intron bun - chr2L 12529334 intron bun - chr2L 12529435 intron bun - chr2L_13_12525001 chr2L_12525001 RAL-907 302 chr2L 12647258 12647298 chr2L 12647345 12647395 16 96 5.5 3.5 4.5 2.9 137 chr2L 12647258 intergenic not near genes chr2L 12647326 intergenic not near genes chr2L 12647395 intergenic not near genes chr2L_16_12645001 chr2L_12645001 RAL-907 303 chr2L 12731038 12731088 chr2L 12735825 12735875 F-element 18 4784 3.0 5.0 4.0 3.6 4837 chr2L 12731038 intron MRP + chr2L 12733456 intron MRP + chr2L 12735875 intron MRP + chr2L_18_12730001 chr2L_12730001 RAL-907 304 chr2L 12739158 12739200 chr2L 12743959 12744001 Doc 12 4799 3.0 5.0 4.0 2.4 4843 chr2L 12739158 exon MRP + chr2L 12741580 intron MRP + chr2L 12744001 exon MRP + chr2L_12_12740001 chr2L_12740001 RAL-907 305 chr2L 12763807 12763873 chr2L 12764039 12764092 BS 8 222 0.0 0.0 0.0 8.0 285 chr2L 12763807 intergenic not near genes chr2L 12763950 intergenic not near genes chr2L 12764092 intergenic not near genes chr2L_8_12760001 chr2L_12760001 RAL-907 306 chr2L 12766752 12766776 chr2L 12766850 12766874 11 98 2.0 5.0 3.5 2.4 122 chr2L 12766752 intergenic not near genes chr2L 12766813 intergenic not near genes chr2L 12766874 intergenic not near genes chr2L_11_12765001 chr2L_12765001 RAL-907 307 chr2L 12781781 12781800 chr2L 12789251 12789270 Quasimodo 10 7468 6.5 5.5 6.0 1.4 7489 chr2L 12781781 intergenic not near genes chr2L 12785526 intergenic not near genes chr2L 12789270 intergenic not near genes chr2L_10_12785001 chr2L_12785001 RAL-907 308 chr2L 12781801 12781814 chr2L 12789246 12789279 Quasimodo 7 7465 5.0 4.5 4.8 1.2 7478 chr2L 12781801 intergenic not near genes chr2L 12785540 intergenic not near genes chr2L 12789279 intergenic not near genes chr2L_7_12785001 chr2L_12785001 RAL-907 309 chr2L 12791597 12791632 chr2L 12795292 12795302 F-element 11 3689 1.5 9.5 5.5 1.7 3705 chr2L 12791597 intergenic not near genes chr2L 12793450 intergenic not near genes chr2L 12795302 intergenic not near genes chr2L_11_12790001 chr2L_12790001 RAL-907 310 chr2L 12835534 12835585 chr2L 12835663 12835714 15 129 4.5 3.0 3.8 3.1 180 chr2L 12835534 intergenic not near genes chr2L 12835624 intergenic not near genes chr2L 12835714 intergenic not near genes chr2L_15_12835001 chr2L_12835001 RAL-907 311 chr2L 12848413 12848465 chr2L 12848524 12848571 5 108 1.0 6.5 3.8 1.0 158 chr2L 12848413 intergenic not near genes chr2L 12848492 intergenic not near genes chr2L 12848571 intergenic not near genes chr2L_5_12845001 chr2L_12845001 RAL-907 312 chr2L 12861688 12861728 chr2L 12863175 12863215 hobo 11 1480 1.0 2.5 1.8 3.9 1527 chr2L 12861688 intergenic not near genes chr2L 12862452 intergenic not near genes chr2L 12863215 intergenic not near genes chr2L_11_12860001 chr2L_12860001 RAL-907 313 chr2L 12905460 12905498 chr2L 12905562 12905602 15 104 2.5 2.0 2.2 4.7 142 chr2L 12905460 intergenic not near genes chr2L 12905531 intergenic not near genes chr2L 12905602 intergenic not near genes chr2L_15_12905001 chr2L_12905001 RAL-907 314 chr2L 12933830 12933883 chr2L 12941317 12941370 blood 9 7482 2.5 1.5 2.0 3.0 7540 chr2L 12933830 intergenic not near genes chr2L 12937600 intergenic not near genes chr2L 12941370 intergenic not near genes chr2L_9_12935001 chr2L_12935001 RAL-907 315 chr2L 13036226 13036272 chr2L 13036488 13036534 X-element 15 262 2.0 9.0 5.5 2.3 308 chr2L 13036226 intron CG9932 - chr2L 13036380 intron CG9932 - chr2L 13036534 intron CG9932 - chr2L_15_13035001 chr2L_13035001 RAL-907 316 chr2L 13076192 13076234 chr2L 13076821 13076865 7 628 4.0 2.0 3.0 1.8 673 chr2L 13076192 intergenic not near genes chr2L 13076528 intergenic not near genes chr2L 13076865 intergenic not near genes chr2L_7_13075001 chr2L_13075001 RAL-907 317 chr2L 13109434 13109474 chr2L 13109582 13109622 14 148 2.0 2.5 2.2 4.4 188 chr2L 13109434 3` UTR CG5142 + chr2L 13109528 intergenic CG5142 + chr2L 13109622 intergenic CG5142 + chr2L_14_13105001 chr2L_13105001 RAL-907 318 chr2L 13122392 13122427 chr2L 13122516 13122551 4 122 3.0 3.0 3.0 1.0 159 chr2L 13122392 intergenic not near genes chr2L 13122472 intergenic not near genes chr2L 13122551 intergenic not near genes chr2L_4_13120001 chr2L_13120001 RAL-907 319 chr2L 13147925 13147944 chr2L 13148026 13148045 12 100 3.0 2.5 2.8 3.2 120 chr2L 13147925 intergenic not near genes chr2L 13147985 intergenic not near genes chr2L 13148045 intergenic not near genes chr2L_12_13145001 chr2L_13145001 RAL-907 320 chr2L 13147950 13147960 chr2L 13148025 13148061 8 97 3.0 2.0 2.5 2.3 111 chr2L 13147950 intergenic not near genes chr2L 13148006 intergenic not near genes chr2L 13148061 intergenic not near genes chr2L_8_13145001 chr2L_13145001 RAL-907 321 chr2L 13152212 13152259 chr2L 13152310 13152334 14 93 8.0 2.0 5.0 2.3 122 chr2L 13152212 intergenic not near genes chr2L 13152273 intergenic not near genes chr2L 13152334 intergenic not near genes chr2L_14_13150001 chr2L_13150001 RAL-907 322 chr2L 13154103 13154124 chr2L 13154198 13154221 14 97 4.0 0.0 2.0 4.7 118 chr2L 13154103 intergenic not near genes chr2L 13154162 intergenic not near genes chr2L 13154221 intergenic not near genes chr2L_14_13150001 chr2L_13150001 RAL-907 323 chr2L 13266358 13266410 chr2L 13266466 13266471 21 97 1.5 3.5 2.5 6.0 113 chr2L 13266358 intron CG44085 + chr2L 13266414 intron CG44085 + chr2L 13266471 intron CG44085 + chr2L_21_13265001 chr2L_13265001 RAL-907 324 chr2L 13292702 13292757 chr2L 13292818 13292860 16 105 7.0 3.5 5.2 2.6 158 chr2L 13292702 intron CG31729 + chr2L 13292781 intron CG31729 + chr2L 13292860 intron CG31729 + chr2L_16_13290001 chr2L_13290001 RAL-907 325 chr2L 13294105 13294121 chr2L 13294176 13294218 4 86 4.0 0.5 2.2 1.2 113 chr2L 13294105 intron CG31729 + chr2L 13294162 intron CG31729 + chr2L 13294218 intron CG31729 + chr2L_4_13290001 chr2L_13290001 RAL-907 326 chr2L 13398723 13398750 chr2L 13398823 13398850 7 99 3.5 4.5 4.0 1.4 127 chr2L 13398723 intergenic CG10859 -,CR44600 -,CG7110 + chr2L 13398786 intergenic CR44600 -,CG10859 -,CG7110 + chr2L 13398850 intergenic CR44600 -,CG7110 +,CG10859 - chr2L_7_13395001 chr2L_13395001 RAL-907 327 chr2L 13405629 13405658 chr2L 13410446 13410475 Doc 5 4815 2.5 8.0 5.2 0.8 4846 chr2L 13405629 exon CG7110 + chr2L 13408052 intron CG7110 + chr2L 13410475 intron CG7110 + chr2L_5_13405001 chr2L_13405001 RAL-907 328 chr2L 13405661 13405682 chr2L 13410445 13410464 Doc 12 4803 2.0 8.0 5.0 2.0 4803 chr2L 13405661 exon CG7110 + chr2L 13408062 intron CG7110 + chr2L 13410464 intron CG7110 + chr2L_12_13405001 chr2L_13405001 RAL-907 329 chr2L 13435225 13435271 chr2L 13435385 13435432 11 162 3.5 3.5 3.5 2.4 207 chr2L 13435225 intron CG42784 + chr2L 13435328 intron CG42784 + chr2L 13435432 intron CG42784 + chr2L_11_13435001 chr2L_13435001 RAL-907 330 chr2L 13437328 13437369 chr2L 13437429 13437473 4 102 3.5 0.0 1.8 1.4 145 chr2L 13437328 intron,intron CG42784 +,Tehao + chr2L 13437400 intron,intron CG42784 +,Tehao + chr2L 13437473 intron,intron CG42784 +,Tehao + chr2L_4_13435001 chr2L_13435001 RAL-907 331 chr2L 13449471 13449495 chr2L 13456922 13456937 Quasimodo 9 7454 1.0 8.0 4.5 1.6 7466 chr2L 13449471 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453204 intron CG42784 + chr2L 13456937 intron CG42784 + chr2L_9_13450001 chr2L_13450001 RAL-907 332 chr2L 13481438 13481464 chr2L 13482056 13482090 jockey 7 626 5.0 4.5 4.8 1.2 652 chr2L 13481438 intron CG42784 + chr2L 13481764 intron CG42784 + chr2L 13482090 intron CG42784 + chr2L_7_13480001 chr2L_13480001 RAL-907 333 chr2L 13506159 13506193 chr2L 13506252 13506295 5 92 3.0 3.0 3.0 1.2 136 chr2L 13506159 exon B4 - chr2L 13506227 exon B4 - chr2L 13506295 exon B4 - chr2L_5_13505001 chr2L_13505001 RAL-907 334 chr2L 13522266 13522280 chr2L 13527590 13527607 Transpac 5 5326 2.5 5.0 3.8 1.0 5341 chr2L 13522266 intron B4 - chr2L 13524936 intron B4 - chr2L 13527607 intron B4 - chr2L_5_13520001 chr2L_13520001 RAL-907 335 chr2L 13609550 13609567 chr2L 13609721 13609741 8 178 2.5 6.0 4.2 1.5 191 chr2L 13609550 intron kuz + chr2L 13609646 intron kuz + chr2L 13609741 intron kuz + chr2L_8_13605001 chr2L_13605001 RAL-907 336 chr2L 13622125 13622164 chr2L 13622234 13622247 15 102 4.0 1.5 2.8 3.9 122 chr2L 13622125 intron kuz + chr2L 13622186 intron kuz + chr2L 13622247 intron kuz + chr2L_15_13620001 chr2L_13620001 RAL-907 337 chr2L 13638843 13638891 chr2L 13638967 13639004 15 121 1.0 3.5 2.2 4.7 161 chr2L 13638843 3` UTR kuz + chr2L 13638924 3` UTR kuz + chr2L 13639004 3` UTR kuz + chr2L_15_13635001 chr2L_13635001 RAL-907 338 chr2L 13670008 13670039 chr2L 13670112 13670143 15 103 8.0 7.5 7.8 1.7 135 chr2L 13670008 intron CG18507 + chr2L 13670076 intron CG18507 + chr2L 13670143 intron CG18507 + chr2L_15_13670001 chr2L_13670001 RAL-907 339 chr2L 13713536 13713572 chr2L 13713632 13713668 9 94 3.0 0.5 1.8 3.2 132 chr2L 13713536 intron CG31814 - chr2L 13713602 intron CG31814 - chr2L 13713668 intron CG31814 - chr2L_9_13710001 chr2L_13710001 RAL-907 340 chr2L 13749193 13749209 chr2L 13749296 13749312 7 103 0.0 0.0 0.0 7.0 119 chr2L 13749193 intron,intron CR44846 +,TM9SF4 + chr2L 13749252 intron,intron CR44846 +,TM9SF4 + chr2L 13749312 intron,intron CR44846 +,TM9SF4 + chr2L_7_13745001 chr2L_13745001 RAL-907 341 chr2L 13800158 13800202 chr2L 13800282 13800325 8 124 0.5 4.5 2.5 2.3 167 chr2L 13800158 intergenic Sec71 + chr2L 13800242 intergenic not near genes chr2L 13800325 intergenic not near genes chr2L_8_13800001 chr2L_13800001 RAL-907 342 chr2L 13842111 13842164 chr2L 13842215 13842268 14 103 3.5 3.5 3.5 3.1 157 chr2L 13842111 intron CenG1A + chr2L 13842190 intron CenG1A + chr2L 13842268 intron CenG1A + chr2L_14_13840001 chr2L_13840001 RAL-907 343 chr2L 13853072 13853110 chr2L 13862232 13862280 roo 11 9168 2.5 4.5 3.5 2.4 9208 chr2L 13853072 intron CenG1A + chr2L 13857676 intron CenG1A + chr2L 13862280 intron CenG1A + chr2L_11_13855001 chr2L_13855001 RAL-907 344 chr2L 13862309 13862355 chr2L 13862422 13862468 26 112 5.5 7.5 6.5 3.5 159 chr2L 13862309 intron CenG1A + chr2L 13862388 intron CenG1A + chr2L 13862468 intron CenG1A + chr2L_26_13860001 chr2L_13860001 RAL-907 345 chr2L 13909596 13909642 chr2L 13909814 13909816 10 203 3.0 5.0 4.0 2.0 220 chr2L 13909596 5` UTR Ance-2 + chr2L 13909706 intron Ance-2 + chr2L 13909816 exon Ance-2 + chr2L_10_13905001 chr2L_13905001 RAL-907 346 chr2L 13952169 13952178 chr2L 13952271 13952280 4 102 1.0 3.5 2.2 1.2 111 chr2L 13952169 intron Ance-3 + chr2L 13952224 intron Ance-3 + chr2L 13952280 intron Ance-3 + chr2L_4_13950001 chr2L_13950001 RAL-907 347 chr2L 13988262 13988299 chr2L 13988369 13988406 11 103 3.0 0.0 1.5 4.4 144 chr2L 13988262 intron rk - chr2L 13988334 intron rk - chr2L 13988406 intron rk - chr2L_11_13985001 chr2L_13985001 RAL-907 348 chr2L 14079146 14079190 chr2L 14079703 14079747 5 553 2.5 2.0 2.2 1.6 601 chr2L 14079146 intron nAChRalpha5 + chr2L 14079446 intron nAChRalpha5 + chr2L 14079747 intron nAChRalpha5 + chr2L_5_14075001 chr2L_14075001 RAL-907 349 chr2L 14160671 14160685 chr2L 14160777 14160780 6 103 7.0 4.5 5.8 0.9 109 chr2L 14160671 intergenic CG17341 +,CG43332 - chr2L 14160726 intergenic CG17341 +,CG43332 - chr2L 14160780 intergenic CG17341 +,CG43332 - chr2L_6_14160001 chr2L_14160001 RAL-907 350 chr2L 14160686 14160717 chr2L 14160775 14160823 10 103 2.5 4.5 3.5 2.2 137 chr2L 14160686 intergenic CG17341 +,CG43332 - chr2L 14160754 intergenic CG17341 +,CG43332 - chr2L 14160823 intergenic CG17341 +,CG43332 - chr2L_10_14160001 chr2L_14160001 RAL-907 351 chr2L 14171480 14171528 chr2L 14171580 14171628 14 99 2.0 3.0 2.5 4.0 148 chr2L 14171480 intron CG43333 - chr2L 14171554 intron CG43333 - chr2L 14171628 intron CG43333 - chr2L_14_14170001 chr2L_14170001 RAL-907 352 chr2L 14181266 14181317 chr2L 14181366 14181417 5 91 2.0 6.0 4.0 1.0 151 chr2L 14181266 intergenic not near genes chr2L 14181342 intergenic not near genes chr2L 14181417 intergenic not near genes chr2L_5_14180001 chr2L_14180001 RAL-907 353 chr2L 14194730 14194738 chr2L 14194794 14194842 7 90 3.5 1.0 2.2 2.2 112 chr2L 14194730 intron Dyrk2 - chr2L 14194786 intron Dyrk2 - chr2L 14194842 intron Dyrk2 - chr2L_7_14190001 chr2L_14190001 RAL-907 354 chr2L 14229614 14229623 chr2L 14229727 14229736 6 113 4.0 0.5 2.2 1.9 122 chr2L 14229614 intron Dyrk2 - chr2L 14229675 intron Dyrk2 - chr2L 14229736 intron Dyrk2 - chr2L_6_14225001 chr2L_14225001 RAL-907 355 chr2L 14374759 14374787 chr2L 14374870 14374898 4 111 3.0 1.5 2.2 1.2 139 chr2L 14374759 intergenic not near genes chr2L 14374828 intergenic not near genes chr2L 14374898 intergenic not near genes chr2L_4_14370001 chr2L_14370001 RAL-907 356 chr2L 14378634 14378667 chr2L 14378733 14378766 15 98 6.5 0.0 3.2 3.6 132 chr2L 14378634 3` UTR ppk - chr2L 14378700 3` UTR ppk - chr2L 14378766 3` UTR ppk - chr2L_15_14375001 chr2L_14375001 RAL-907 357 chr2L 14537633 14537650 chr2L 14537739 14537756 4 106 2.0 7.0 4.5 0.7 123 chr2L 14537633 intergenic not near genes chr2L 14537694 intergenic not near genes chr2L 14537756 intergenic not near genes chr2L_4_14535001 chr2L_14535001 RAL-907 358 chr2L 14570701 14570718 chr2L 14570802 14570811 6 99 4.5 3.5 4.0 1.2 110 chr2L 14570701 intergenic not near genes chr2L 14570756 intergenic not near genes chr2L 14570811 intergenic not near genes chr2L_6_14570001 chr2L_14570001 RAL-907 359 chr2L 14768916 14768954 chr2L 14769014 14769052 10 97 1.0 1.0 1.0 5.0 136 chr2L 14768916 intergenic not near genes chr2L 14768984 intergenic not near genes chr2L 14769052 intergenic not near genes chr2L_10_14765001 chr2L_14765001 RAL-907 360 chr2L 14803862 14803906 chr2L 14809080 14809129 copia 5 5214 2.5 3.5 3.0 1.2 5267 chr2L 14803862 intergenic not near genes chr2L 14806496 intergenic not near genes chr2L 14809129 intergenic not near genes chr2L_5_14805001 chr2L_14805001 RAL-907 361 chr2L 14840966 14841008 chr2L 14841073 14841113 10 106 2.5 1.0 1.8 3.6 147 chr2L 14840966 3` UTR CR43805 - chr2L 14841040 3` UTR CR43805 - chr2L 14841113 3` UTR CR43805 - chr2L_10_14840001 chr2L_14840001 RAL-907 362 chr2L 14842394 14842443 chr2L 14842498 14842543 10 100 2.5 2.5 2.5 2.9 149 chr2L 14842394 exon CG42682 + chr2L 14842468 intron CG42682 + chr2L 14842543 exon CG42682 + chr2L_10_14840001 chr2L_14840001 RAL-907 363 chr2L 14850679 14850719 chr2L 14850766 14850818 11 97 1.0 2.5 1.8 3.9 139 chr2L 14850679 intron CG15279 - chr2L 14850748 intron CG15279 - chr2L 14850818 intron CG15279 - chr2L_11_14850001 chr2L_14850001 RAL-907 364 chr2L 14864521 14864565 chr2L 14864624 14864667 6 100 2.0 2.0 2.0 2.0 146 chr2L 14864521 intergenic not near genes chr2L 14864594 intergenic not near genes chr2L 14864667 intergenic not near genes chr2L_6_14860001 chr2L_14860001 RAL-907 365 chr2L 14889933 14889978 chr2L 14890378 14890423 jockey 11 440 3.5 4.5 4.0 2.2 490 chr2L 14889933 intergenic not near genes chr2L 14890178 intergenic not near genes chr2L 14890423 intergenic not near genes chr2L_11_14890001 chr2L_14890001 RAL-907 366 chr2L 14950431 14950480 chr2L 14950926 14950935 7 482 2.0 1.5 1.8 2.5 504 chr2L 14950431 intron CG42313 - chr2L 14950683 intron CG42313 - chr2L 14950935 intron CG42313 - chr2L_7_14950001 chr2L_14950001 RAL-907 367 chr2L 14982119 14982289 chr2L 14982246 14982395 31 114 0.5 0.5 0.5 20.7 276 chr2L 14982119 intron mol - chr2L 14982257 intron mol - chr2L 14982395 intron mol - chr2L_31_14980001 chr2L_14980001 RAL-907 368 chr2L 14984365 14984405 chr2L 14991987 14992027 opus 15 7615 3.5 2.5 3.0 3.8 7662 chr2L 14984365 intron mol - chr2L 14988196 intron mol - chr2L 14992027 intron mol - chr2L_15_14985001 chr2L_14985001 RAL-907 369 chr2L 15000855 15000877 chr2L 15000961 15001015 11 114 23.0 26.5 24.8 0.4 160 chr2L 15000855 intergenic not near genes chr2L 15000935 intergenic not near genes chr2L 15001015 intergenic not near genes chr2L_11_15000001 chr2L_15000001 RAL-907 370 chr2L 15003524 15003571 chr2L 15003628 15003655 9 99 3.0 4.5 3.8 1.9 131 chr2L 15003524 intergenic not near genes chr2L 15003590 intergenic not near genes chr2L 15003655 intergenic not near genes chr2L_9_15000001 chr2L_15000001 RAL-907 371 chr2L 15013132 15013178 chr2L 15013256 15013307 8 125 0.5 2.0 1.2 3.6 175 chr2L 15013132 intergenic CR43856 - chr2L 15013220 intergenic not near genes chr2L 15013307 intergenic not near genes chr2L_8_15010001 chr2L_15010001 RAL-907 372 chr2L 15014615 15014652 chr2L 15014704 15014751 5 90 0.5 4.5 2.5 1.4 136 chr2L 15014615 intergenic not near genes chr2L 15014683 intergenic not near genes chr2L 15014751 intergenic not near genes chr2L_5_15010001 chr2L_15010001 RAL-907 373 chr2L 15021420 15021472 chr2L 15021516 15021568 19 96 4.0 4.5 4.2 3.7 148 chr2L 15021420 intron GABA-B-R1 + chr2L 15021494 intron GABA-B-R1 + chr2L 15021568 intron GABA-B-R1 + chr2L_19_15020001 chr2L_15020001 RAL-907 374 chr2L 15025999 15026052 chr2L 15026100 15026153 14 97 2.5 3.0 2.8 3.7 154 chr2L 15025999 exon GABA-B-R1 + chr2L 15026076 intron GABA-B-R1 + chr2L 15026153 intron GABA-B-R1 + chr2L_14_15025001 chr2L_15025001 RAL-907 375 chr2L 15127754 15127786 chr2L 15127860 15127892 8 101 7.0 1.0 4.0 1.6 138 chr2L 15127754 intergenic not near genes chr2L 15127823 intergenic not near genes chr2L 15127892 intergenic not near genes chr2L_8_15125001 chr2L_15125001 RAL-907 376 chr2L 15138757 15138766 chr2L 15138860 15138869 4 103 3.5 8.0 5.8 0.6 112 chr2L 15138757 intergenic not near genes chr2L 15138813 intergenic not near genes chr2L 15138869 intergenic not near genes chr2L_4_15135001 chr2L_15135001 RAL-907 377 chr2L 15216102 15216113 chr2L 15216236 15216247 4 134 4.5 0.0 2.2 1.2 145 chr2L 15216102 3` UTR CG43230 + chr2L 15216174 intergenic CG43230 + chr2L 15216247 intergenic CG43230 + chr2L_4_15215001 chr2L_15215001 RAL-907 378 chr2L 15226363 15226385 chr2L 15226459 15226481 4 92 3.5 5.5 4.5 0.7 118 chr2L 15226363 intergenic not near genes chr2L 15226422 intergenic not near genes chr2L 15226481 intergenic not near genes chr2L_4_15225001 chr2L_15225001 RAL-907 379 chr2L 15226386 15226396 chr2L 15226457 15226492 6 81 3.0 5.5 4.2 1.2 106 chr2L 15226386 intergenic not near genes chr2L 15226439 intergenic not near genes chr2L 15226492 intergenic not near genes chr2L_6_15225001 chr2L_15225001 RAL-907 380 chr2L 15252963 15253002 chr2L 15253061 15253101 14 99 5.5 3.5 4.5 2.5 138 chr2L 15252963 intron dao + chr2L 15253032 intron dao + chr2L 15253101 intron dao + chr2L_14_15250001 chr2L_15250001 RAL-907 381 chr2L 15375803 15375843 chr2L 15375935 15375975 17 132 4.0 6.0 5.0 2.8 172 chr2L 15375803 intergenic not near genes chr2L 15375889 intergenic not near genes chr2L 15375975 intergenic not near genes chr2L_17_15375001 chr2L_15375001 RAL-907 382 chr2L 15395732 15395753 chr2L 15396158 15396162 6 427 2.5 4.0 3.2 1.4 430 chr2L 15395732 intergenic not near genes chr2L 15395947 intergenic CR44859 + chr2L 15396162 intergenic CR44859 + chr2L_6_15395001 chr2L_15395001 RAL-907 383 chr2L 15395761 15395765 chr2L 15396144 15396176 5 397 0.0 4.0 2.0 1.7 415 chr2L 15395761 intergenic not near genes chr2L 15395968 intergenic CR44859 + chr2L 15396176 intergenic CR44859 + chr2L_5_15395001 chr2L_15395001 RAL-907 384 chr2L 15446043 15446083 chr2L 15453520 15453567 blood 16 7486 2.5 4.0 3.2 3.8 7524 chr2L 15446043 intergenic not near genes chr2L 15449805 intergenic not near genes chr2L 15453567 intergenic not near genes chr2L_16_15445001 chr2L_15445001 RAL-907 385 chr2L 15482566 15482596 chr2L 15482722 15482752 7 155 5.5 7.5 6.5 0.9 186 chr2L 15482566 intergenic not near genes chr2L 15482659 intergenic not near genes chr2L 15482752 intergenic not near genes chr2L_7_15480001 chr2L_15480001 RAL-907 386 chr2L 15490028 15490046 chr2L 15490164 15490182 11 136 0.0 8.5 4.2 2.1 154 chr2L 15490028 intergenic not near genes chr2L 15490105 intergenic not near genes chr2L 15490182 intergenic not near genes chr2L_11_15490001 chr2L_15490001 RAL-907 387 chr2L 15499891 15499934 chr2L 15499999 15500041 7 108 5.0 5.0 5.0 1.2 150 chr2L 15499891 intron lace + chr2L 15499966 intron lace + chr2L 15500041 intron lace + chr2L_7_15495001 chr2L_15495001 RAL-907 388 chr2L 15514310 15514320 chr2L 15514414 15514420 4 103 10.5 8.0 9.2 0.4 110 chr2L 15514310 intergenic not near genes chr2L 15514365 intergenic not near genes chr2L 15514420 intergenic not near genes chr2L_4_15510001 chr2L_15510001 RAL-907 389 chr2L 15535875 15535918 chr2L 15535979 15536028 10 109 5.0 7.0 6.0 1.4 153 chr2L 15535875 intergenic not near genes chr2L 15535952 intergenic not near genes chr2L 15536028 intergenic not near genes chr2L_10_15535001 chr2L_15535001 RAL-907 390 chr2L 15544380 15544410 chr2L 15544456 15544509 11 81 1.5 3.0 2.2 3.4 129 chr2L 15544380 intergenic not near genes chr2L 15544444 intergenic not near genes chr2L 15544509 intergenic not near genes chr2L_11_15540001 chr2L_15540001 RAL-907 391 chr2L 15586397 15586439 chr2L 15593469 15593502 297 16 7070 7.5 5.0 6.2 2.2 7105 chr2L 15586397 intergenic not near genes chr2L 15589950 intergenic not near genes chr2L 15593502 intergenic not near genes chr2L_16_15585001 chr2L_15585001 RAL-907 392 chr2L 15598780 15598799 chr2L 15598879 15598898 4 99 5.5 0.0 2.8 1.1 118 chr2L 15598780 intergenic not near genes chr2L 15598839 intergenic not near genes chr2L 15598898 intergenic not near genes chr2L_4_15595001 chr2L_15595001 RAL-907 393 chr2L 15732489 15732535 chr2L 15732604 15732650 14 114 3.5 2.0 2.8 3.7 161 chr2L 15732489 intron CycE - chr2L 15732570 intron CycE - chr2L 15732650 intron CycE - chr2L_14_15730001 chr2L_15730001 RAL-907 394 chr2L 15736954 15737002 chr2L 15737059 15737107 12 101 2.5 0.5 1.5 4.8 153 chr2L 15736954 intron CycE - chr2L 15737030 intron CycE - chr2L 15737107 intron CycE - chr2L_12_15735001 chr2L_15735001 RAL-907 395 chr2L 15776154 15776180 chr2L 15776497 15776525 8 344 1.0 5.0 3.0 2.0 371 chr2L 15776154 intergenic CG43760 - chr2L 15776340 intergenic CG43760 - chr2L 15776525 3` UTR CG43760 - chr2L_8_15775001 chr2L_15775001 RAL-907 396 chr2L 15819297 15819339 chr2L 15819393 15819425 6 93 3.5 3.0 3.2 1.4 128 chr2L 15819297 intergenic not near genes chr2L 15819361 intergenic not near genes chr2L 15819425 intergenic not near genes chr2L_6_15815001 chr2L_15815001 RAL-907 397 chr2L 15823338 15823360 chr2L 15823433 15823456 5 96 7.0 1.5 4.2 1.0 118 chr2L 15823338 intergenic CR44601 - chr2L 15823397 intergenic CR44601 - chr2L 15823456 intergenic not near genes chr2L_5_15820001 chr2L_15820001 RAL-907 398 chr2L 15954168 15954211 chr2L 15954267 15954312 11 99 2.5 5.5 4.0 2.2 144 chr2L 15954168 intron beat-Ib - chr2L 15954240 intron beat-Ib - chr2L 15954312 intron beat-Ib - chr2L_11_15950001 chr2L_15950001 RAL-907 399 chr2L 15956004 15956045 chr2L 15957491 15957530 hobo 8 1485 9.0 7.0 8.0 0.9 1526 chr2L 15956004 intron beat-Ib - chr2L 15956767 intron beat-Ib - chr2L 15957530 intron beat-Ib - chr2L_8_15955001 chr2L_15955001 RAL-907 400 chr2L 15960852 15960853 chr2L 15961183 15961194 4 338 11.0 4.5 7.8 0.5 342 chr2L 15960852 intron,5` UTR beat-Ib -,CR43803 + chr2L 15961023 intron,5` UTR beat-Ib -,CR43803 + chr2L 15961194 intron beat-Ib - chr2L_4_15960001 chr2L_15960001 RAL-907 401 chr2L 15960854 15960859 chr2L 15961164 15961200 4 333 10.5 3.5 7.0 0.5 346 chr2L 15960854 intron,5` UTR beat-Ib -,CR43803 + chr2L 15961027 intron,5` UTR beat-Ib -,CR43803 + chr2L 15961200 intron beat-Ib - chr2L_4_15960001 chr2L_15960001 RAL-907 402 chr2L 16001447 16001491 chr2L 16001555 16001599 15 106 0.0 2.5 1.2 6.8 152 chr2L 16001447 intron beat-Ic + chr2L 16001523 intron beat-Ic + chr2L 16001599 intron beat-Ic + chr2L_15_16000001 chr2L_16000001 RAL-907 403 chr2L 16008682 16008694 chr2L 16008803 16008815 5 121 3.5 2.0 2.8 1.3 133 chr2L 16008682 intron beat-Ic + chr2L 16008748 intron beat-Ic + chr2L 16008815 intron beat-Ic + chr2L_5_16005001 chr2L_16005001 RAL-907 404 chr2L 16043559 16043594 chr2L 16043664 16043694 14 105 2.0 7.5 4.8 2.4 135 chr2L 16043559 intron,intron BicC +,CG45084 + chr2L 16043626 intron,intron BicC +,CG45084 + chr2L 16043694 intron,intron BicC +,CG45084 + chr2L_14_16040001 chr2L_16040001 RAL-907 405 chr2L 16049267 16049300 chr2L 16049362 16049372 4 87 1.5 2.0 1.8 1.4 105 chr2L 16049267 intergenic not near genes chr2L 16049320 intergenic not near genes chr2L 16049372 intergenic not near genes chr2L_4_16045001 chr2L_16045001 RAL-907 406 chr2L 16056140 16056158 chr2L 16056234 16056248 5 94 1.0 2.5 1.8 1.8 108 chr2L 16056140 intron beat-Ia + chr2L 16056194 intron beat-Ia + chr2L 16056248 intron beat-Ia + chr2L_5_16055001 chr2L_16055001 RAL-907 407 chr2L 16058105 16058145 chr2L 16058266 16058306 17 161 4.5 2.0 3.2 4.0 201 chr2L 16058105 intron beat-Ia + chr2L 16058206 intron beat-Ia + chr2L 16058306 intron beat-Ia + chr2L_17_16055001 chr2L_16055001 RAL-907 408 chr2L 16106534 16106581 chr2L 16106672 16106719 4 138 1.5 2.0 1.8 1.4 185 chr2L 16106534 intergenic not near genes chr2L 16106626 intergenic not near genes chr2L 16106719 intergenic not near genes chr2L_4_16105001 chr2L_16105001 RAL-907 409 chr2L 16121319 16121374 chr2L 16121450 16121505 15 125 4.0 1.0 2.5 4.3 186 chr2L 16121319 intergenic not near genes chr2L 16121412 intergenic not near genes chr2L 16121505 intergenic not near genes chr2L_15_16120001 chr2L_16120001 RAL-907 410 chr2L 16141148 16141183 chr2L 16146374 16146410 copia 10 5227 4.5 1.5 3.0 2.5 5262 chr2L 16141148 intergenic not near genes chr2L 16143779 intergenic not near genes chr2L 16146410 intergenic not near genes chr2L_10_16140001 chr2L_16140001 RAL-907 411 chr2L 16153732 16153742 chr2L 16160810 16160830 297 6 7086 3.0 3.0 3.0 1.5 7098 chr2L 16153732 intergenic not near genes chr2L 16157281 intergenic not near genes chr2L 16160830 intergenic not near genes chr2L_6_16155001 chr2L_16155001 RAL-907 412 chr2L 16177978 16178016 chr2L 16178215 16178253 11 236 1.0 2.0 1.5 4.4 275 chr2L 16177978 intron Ca-alpha1D + chr2L 16178116 intron Ca-alpha1D + chr2L 16178253 intron Ca-alpha1D + chr2L_11_16175001 chr2L_16175001 RAL-907 413 chr2L 16227297 16227318 chr2L 16227479 16227501 9 181 2.0 2.5 2.2 2.8 204 chr2L 16227297 intergenic not near genes chr2L 16227399 intergenic not near genes chr2L 16227501 intergenic not near genes chr2L_9_16225001 chr2L_16225001 RAL-907 414 chr2L 16354758 16354785 chr2L 16354870 16354897 6 112 4.0 1.5 2.8 1.6 139 chr2L 16354758 intergenic CaBP1 -,CG4455 + chr2L 16354828 intergenic CaBP1 -,CG4455 + chr2L 16354897 3` UTR CaBP1 - chr2L_6_16350001 chr2L_16350001 RAL-907 415 chr2L 16375370 16375399 chr2L 16375481 16375509 5 110 13.5 0.0 6.8 0.6 139 chr2L 16375370 intergenic not near genes chr2L 16375440 intergenic not near genes chr2L 16375509 intergenic not near genes chr2L_5_16375001 chr2L_16375001 RAL-907 416 chr2L 16434099 16434128 chr2L 16434201 16434230 11 102 8.0 6.0 7.0 1.4 131 chr2L 16434099 intron CG5888 - chr2L 16434164 intron CG5888 - chr2L 16434230 intron CG5888 - chr2L_11_16430001 chr2L_16430001 RAL-907 417 chr2L 16511945 16511993 chr2L 16519079 16519127 HMS-Beagle 10 7133 5.0 3.5 4.2 1.9 7182 chr2L 16511945 intron CG5953 - chr2L 16515536 intron CG5953 - chr2L 16519127 intron CG5953 - chr2L_10_16515001 chr2L_16515001 RAL-907 418 chr2L 16573610 16573662 chr2L 16573719 16573771 18 104 5.5 4.0 4.8 3.1 161 chr2L 16573610 intron CG42389 + chr2L 16573690 intron CG42389 + chr2L 16573771 intron CG42389 + chr2L_18_16570001 chr2L_16570001 RAL-907 419 chr2L 16697047 16697254 chr2L 16697217 16697363 8 140 0.0 0.0 0.0 8.0 316 chr2L 16697047 intron grp + chr2L 16697205 intron grp + chr2L 16697363 intron,3` UTR grp +,CR44975 - chr2L_8_16695001 chr2L_16695001 RAL-907 420 chr2L 16709093 16709104 chr2L 16709171 16709208 5 99 3.5 9.0 6.2 0.7 115 chr2L 16709093 intron CG31808 - chr2L 16709150 intron CG31808 - chr2L 16709208 intron CG31808 - chr2L_5_16705001 chr2L_16705001 RAL-907 421 chr2L 16716929 16716978 chr2L 16717066 16717115 7 136 5.0 3.5 4.2 1.3 186 chr2L 16716929 intron Cyt-c-d + chr2L 16717022 intron Cyt-c-d + chr2L 16717115 intron Cyt-c-d + chr2L_7_16715001 chr2L_16715001 RAL-907 422 chr2L 16799481 16799505 chr2L 16799643 16799667 9 162 0.0 2.5 1.2 4.1 186 chr2L 16799481 intron Ugt36Bc + chr2L 16799574 intron Ugt36Bc + chr2L 16799667 intron Ugt36Bc + chr2L_9_16795001 chr2L_16795001 RAL-907 423 chr2L 16958089 16958132 chr2L 16962897 16962940 Doc 14 4808 6.5 4.0 5.2 2.3 4851 chr2L 16958089 intergenic not near genes chr2L 16960514 intergenic not near genes chr2L 16962940 intergenic not near genes chr2L_14_16960001 chr2L_16960001 RAL-907 424 chr2L 17005401 17005436 chr2L 17005518 17005553 8 112 2.0 4.0 3.0 2.0 152 chr2L 17005401 intergenic not near genes chr2L 17005477 intergenic not near genes chr2L 17005553 intergenic not near genes chr2L_8_17005001 chr2L_17005001 RAL-907 425 chr2L 17101888 17101915 chr2L 17101985 17102005 6 96 2.5 6.0 4.2 1.2 117 chr2L 17101888 intergenic not near genes chr2L 17101946 intergenic not near genes chr2L 17102005 intergenic not near genes chr2L_6_17100001 chr2L_17100001 RAL-907 426 chr2L 17102988 17103024 chr2L 17103096 17103128 6 104 2.5 2.5 2.5 1.7 140 chr2L 17102988 intergenic not near genes chr2L 17103058 intergenic not near genes chr2L 17103128 intergenic not near genes chr2L_6_17100001 chr2L_17100001 RAL-907 427 chr2L 17168175 17168227 chr2L 17168973 17169014 14 797 2.5 5.0 3.8 2.9 839 chr2L 17168175 intron,intron CG34106 +,beat-IIIa + chr2L 17168594 intron,intron CG34106 +,beat-IIIa + chr2L 17169014 intron,intron CG34106 +,beat-IIIa + chr2L_14_17165001 chr2L_17165001 RAL-907 428 chr2L 17193850 17193870 chr2L 17193957 17193977 5 107 0.0 0.0 0.0 5.0 127 chr2L 17193850 intron beat-IIIc - chr2L 17193914 intron beat-IIIc - chr2L 17193977 intron beat-IIIc - chr2L_5_17190001 chr2L_17190001 RAL-907 429 chr2L 17199145 17199183 chr2L 17200632 17200670 hobo 10 1487 4.0 2.5 3.2 2.4 1525 chr2L 17199145 intron beat-IIIc - chr2L 17199908 intron beat-IIIc - chr2L 17200670 intron beat-IIIc - chr2L_10_17195001 chr2L_17195001 RAL-907 430 chr2L 17351927 17351956 chr2L 17352049 17352078 13 122 1.5 4.5 3.0 3.2 151 chr2L 17351927 intergenic not near genes chr2L 17352002 intergenic not near genes chr2L 17352078 intergenic not near genes chr2L_13_17350001 chr2L_17350001 RAL-907 431 chr2L 17353095 17353142 chr2L 17353199 17353246 15 104 3.0 4.0 3.5 3.3 151 chr2L 17353095 intergenic not near genes chr2L 17353170 intergenic not near genes chr2L 17353246 intergenic CR43239 - chr2L_15_17350001 chr2L_17350001 RAL-907 432 chr2L 17360007 17360044 chr2L 17360205 17360242 10 196 1.5 0.0 0.8 5.6 235 chr2L 17360007 intergenic not near genes chr2L 17360124 intergenic not near genes chr2L 17360242 intergenic not near genes chr2L_10_17360001 chr2L_17360001 RAL-907 433 chr2L 17399313 17399362 chr2L 17399422 17399479 7 119 2.5 0.0 1.2 3.2 166 chr2L 17399313 intron CLIP-190 + chr2L 17399396 intron CLIP-190 + chr2L 17399479 intron CLIP-190 + chr2L_7_17395001 chr2L_17395001 RAL-907 434 chr2L 17425751 17425792 chr2L 17425898 17425939 13 147 3.0 3.5 3.2 3.1 188 chr2L 17425751 intron Dif - chr2L 17425845 intron Dif - chr2L 17425939 intron Dif - chr2L_13_17425001 chr2L_17425001 RAL-907 435 chr2L 17532912 17532949 chr2L 17533258 17533311 7 358 2.0 1.0 1.5 2.8 399 chr2L 17532912 intergenic not near genes chr2L 17533112 intergenic not near genes chr2L 17533311 intergenic not near genes chr2L_7_17530001 chr2L_17530001 RAL-907 436 chr2L 17537004 17537053 chr2L 17537130 17537157 12 123 2.5 2.0 2.2 3.8 153 chr2L 17537004 intergenic not near genes chr2L 17537080 intergenic not near genes chr2L 17537157 intergenic not near genes chr2L_12_17535001 chr2L_17535001 RAL-907 437 chr2L 17543574 17543624 chr2L 17543687 17543737 13 104 3.0 2.5 2.8 3.4 163 chr2L 17543574 intergenic not near genes chr2L 17543656 intergenic not near genes chr2L 17543737 intergenic not near genes chr2L_13_17540001 chr2L_17540001 RAL-907 438 chr2L 17565357 17565387 chr2L 17565468 17565498 9 111 6.0 0.5 3.2 2.1 141 chr2L 17565357 intergenic not near genes chr2L 17565428 intergenic not near genes chr2L 17565498 intergenic not near genes chr2L_9_17565001 chr2L_17565001 RAL-907 439 chr2L 17577713 17577738 chr2L 17577809 17577834 9 96 2.5 6.5 4.5 1.6 121 chr2L 17577713 intergenic not near genes chr2L 17577774 intergenic not near genes chr2L 17577834 intergenic not near genes chr2L_9_17575001 chr2L_17575001 RAL-907 440 chr2L 17623662 17623695 chr2L 17623906 17623945 13 249 3.0 4.0 3.5 2.9 283 chr2L 17623662 intergenic not near genes chr2L 17623804 intergenic not near genes chr2L 17623945 intergenic not near genes chr2L_13_17620001 chr2L_17620001 RAL-907 441 chr2L 17687500 17687520 chr2L 17692265 17692285 F-element 7 4765 4.5 5.5 5.0 1.2 4785 chr2L 17687500 intron CadN - chr2L 17689892 intron CadN - chr2L 17692285 intron CadN - chr2L_7_17685001 chr2L_17685001 RAL-907 442 chr2L 17703647 17703678 chr2L 17703737 17703789 7 104 1.5 0.5 1.0 3.5 142 chr2L 17703647 intron CadN - chr2L 17703718 intron CadN - chr2L 17703789 intron CadN - chr2L_7_17700001 chr2L_17700001 RAL-907 443 chr2L 17709106 17709148 chr2L 17709206 17709252 12 104 1.5 3.5 2.5 3.4 146 chr2L 17709106 intron CadN - chr2L 17709179 intron CadN - chr2L 17709252 intron CadN - chr2L_12_17705001 chr2L_17705001 RAL-907 444 chr2L 17723775 17723802 chr2L 17723888 17723915 7 113 3.0 3.5 3.2 1.7 140 chr2L 17723775 intron CadN - chr2L 17723845 intron CadN - chr2L 17723915 intron CadN - chr2L_7_17720001 chr2L_17720001 RAL-907 445 chr2L 17741946 17741990 chr2L 17742038 17742086 11 93 3.5 1.0 2.2 3.4 140 chr2L 17741946 intron CadN - chr2L 17742016 intron CadN - chr2L 17742086 intron CadN - chr2L_11_17740001 chr2L_17740001 RAL-907 446 chr2L 17819905 17819951 chr2L 17825128 17825173 copia 5 5223 1.5 2.0 1.8 1.8 5268 chr2L 17819905 intron CadN2 - chr2L 17822539 intron CadN2 - chr2L 17825173 intron CadN2 - chr2L_5_17820001 chr2L_17820001 RAL-907 447 chr2L 17842260 17842287 chr2L 17842363 17842392 5 105 1.5 1.0 1.2 2.3 132 chr2L 17842260 intron CadN2 - chr2L 17842326 intron CadN2 - chr2L 17842392 intron CadN2 - chr2L_5_17840001 chr2L_17840001 RAL-907 448 chr2L 17879983 17880023 chr2L 17880090 17880115 6 102 0.5 3.5 2.0 2.0 132 chr2L 17879983 intergenic not near genes chr2L 17880049 intergenic not near genes chr2L 17880115 intergenic not near genes chr2L_6_17880001 chr2L_17880001 RAL-907 449 chr2L 17891451 17891478 chr2L 17891547 17891574 5 97 1.5 5.5 3.5 1.1 123 chr2L 17891451 intergenic not near genes chr2L 17891512 intergenic not near genes chr2L 17891574 intergenic not near genes chr2L_5_17890001 chr2L_17890001 RAL-907 450 chr2L 17911960 17911969 chr2L 17914158 17914167 pogo 4 2198 2.0 8.5 5.2 0.6 2207 chr2L 17911960 intergenic not near genes chr2L 17913064 intergenic not near genes chr2L 17914167 intergenic CG43271 - chr2L_4_17910001 chr2L_17910001 RAL-907 451 chr2L 17943872 17943919 chr2L 17943995 17944042 12 122 2.0 2.5 2.2 3.8 170 chr2L 17943872 intergenic not near genes chr2L 17943957 intergenic not near genes chr2L 17944042 intergenic not near genes chr2L_12_17940001 chr2L_17940001 RAL-907 452 chr2L 17951936 17951942 chr2L 17953423 17953423 hobo 4 1485 2.5 4.5 3.5 0.9 1487 chr2L 17951936 intergenic CR44398 -,CR44397 - chr2L 17952680 intergenic not near genes chr2L 17953423 intergenic not near genes chr2L_4_17950001 chr2L_17950001 RAL-907 453 chr2L 17951946 17951970 chr2L 17953413 17953457 hobo 13 1485 1.5 3.0 2.2 4.1 1511 chr2L 17951946 intergenic CR44398 -,CR44397 - chr2L 17952702 intergenic not near genes chr2L 17953457 intergenic not near genes chr2L_13_17950001 chr2L_17950001 RAL-907 454 chr2L 18027763 18027815 chr2L 18027870 18027922 8 103 2.5 4.5 3.5 1.8 159 chr2L 18027763 intron rdo + chr2L 18027842 intron rdo + chr2L 18027922 intron rdo + chr2L_8_18025001 chr2L_18025001 RAL-907 455 chr2L 18051874 18051904 chr2L 18061029 18061061 roo 7 9155 4.0 1.0 2.5 2.0 9187 chr2L 18051874 intron rdo + chr2L 18056468 intron rdo + chr2L 18061061 intron rdo + chr2L_7_18055001 chr2L_18055001 RAL-907 456 chr2L 18079795 18079845 chr2L 18079901 18079951 16 106 4.5 6.5 5.5 2.5 156 chr2L 18079795 intron Arr1 + chr2L 18079873 intron Arr1 + chr2L 18079951 intron Arr1 + chr2L_16_18075001 chr2L_18075001 RAL-907 457 chr2L 18111230 18111269 chr2L 18111336 18111346 9 103 2.5 4.5 3.5 2.0 116 chr2L 18111230 intergenic not near genes chr2L 18111288 intergenic not near genes chr2L 18111346 intergenic not near genes chr2L_9_18110001 chr2L_18110001 RAL-907 458 chr2L 18199016 18199065 chr2L 18199116 18199162 8 99 3.5 4.5 4.0 1.6 146 chr2L 18199016 intron CG42750 - chr2L 18199089 intron CG42750 - chr2L 18199162 intron CG42750 - chr2L_8_18195001 chr2L_18195001 RAL-907 459 chr2L 18254795 18254840 chr2L 18254915 18254959 22 119 1.5 2.0 1.8 7.9 164 chr2L 18254795 intron CG42750 - chr2L 18254877 intron CG42750 - chr2L 18254959 intron CG42750 - chr2L_22_18250001 chr2L_18250001 RAL-907 460 chr2L 18264118 18264164 chr2L 18264226 18264272 9 108 2.5 0.0 1.2 4.1 154 chr2L 18264118 intron CG42750 - chr2L 18264195 intron CG42750 - chr2L 18264272 intron CG42750 - chr2L_9_18260001 chr2L_18260001 RAL-907 461 chr2L 18291515 18291554 chr2L 18291633 18291657 8 109 2.5 0.5 1.5 3.2 142 chr2L 18291515 intergenic CG43362 -,CR44693 +,CR44696 - chr2L 18291586 intergenic CR44693 +,CG43362 -,CR44696 - chr2L 18291657 intergenic CR44693 +,CG43362 -,CR44696 - chr2L_8_18290001 chr2L_18290001 RAL-907 462 chr2L 18337608 18337660 chr2L 18337704 18337756 10 96 3.0 1.0 2.0 3.3 148 chr2L 18337608 intron Fas3 + chr2L 18337682 intron Fas3 + chr2L 18337756 intron Fas3 + chr2L_10_18335001 chr2L_18335001 RAL-907 463 chr2L 18408015 18408036 chr2L 18412819 18412840 Doc 5 4804 3.5 0.0 1.8 1.8 4825 chr2L 18408015 intergenic not near genes chr2L 18410428 intergenic not near genes chr2L 18412840 intergenic not near genes chr2L_5_18410001 chr2L_18410001 RAL-907 464 chr2L 18423833 18423856 chr2L 18423944 18423967 5 110 4.5 2.5 3.5 1.1 134 chr2L 18423833 intergenic not near genes chr2L 18423900 intergenic not near genes chr2L 18423967 intergenic not near genes chr2L_5_18420001 chr2L_18420001 RAL-907 465 chr2L 18561538 18561579 chr2L 18561659 18561700 12 121 5.0 1.5 3.2 2.9 162 chr2L 18561538 intron Pde11 - chr2L 18561619 intron Pde11 - chr2L 18561700 intron Pde11 - chr2L_12_18560001 chr2L_18560001 RAL-907 466 chr2L 18630787 18630826 chr2L 18630875 18630922 4 95 0.0 4.5 2.2 1.2 135 chr2L 18630787 intron MESR3 + chr2L 18630854 intron MESR3 + chr2L 18630922 intron MESR3 + chr2L_4_18630001 chr2L_18630001 RAL-907 467 chr2L 18811385 18811438 chr2L 18811487 18811540 9 102 7.0 0.0 3.5 2.0 155 chr2L 18811385 intergenic CG10570 -,CG42502 - chr2L 18811462 intergenic CG10570 -,CG42502 - chr2L 18811540 intergenic not near genes chr2L_9_18810001 chr2L_18810001 RAL-907 468 chr2L 18812549 18812590 chr2L 18812821 18812868 7 280 2.0 3.5 2.8 1.8 319 chr2L 18812549 intergenic CG17325 +,CG42305 + chr2L 18812708 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812868 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_7_18810001 chr2L_18810001 RAL-907 469 chr2L 18876851 18876884 chr2L 18876947 18876982 11 97 4.5 4.5 4.5 2.0 131 chr2L 18876851 intron tup - chr2L 18876916 intron tup - chr2L 18876982 intron tup - chr2L_11_18875001 chr2L_18875001 RAL-907 470 chr2L 18883840 18883874 chr2L 18883942 18883975 5 101 5.0 3.5 4.2 1.0 135 chr2L 18883840 intergenic not near genes chr2L 18883908 intergenic not near genes chr2L 18883975 intergenic not near genes chr2L_5_18880001 chr2L_18880001 RAL-907 471 chr2L 18898386 18898398 chr2L 18898482 18898500 5 101 4.0 0.5 2.2 1.6 114 chr2L 18898386 intergenic not near genes chr2L 18898443 intergenic not near genes chr2L 18898500 intergenic not near genes chr2L_5_18895001 chr2L_18895001 RAL-907 472 chr2L 18898399 18898427 chr2L 18898480 18898493 12 95 1.0 0.5 0.8 6.7 94 chr2L 18898399 intergenic not near genes chr2L 18898446 intergenic not near genes chr2L 18898493 intergenic not near genes chr2L_12_18895001 chr2L_18895001 RAL-907 473 chr2L 18902621 18902645 chr2L 18902921 18902946 5 299 4.0 8.5 6.2 0.7 325 chr2L 18902621 intergenic not near genes chr2L 18902784 intergenic not near genes chr2L 18902946 intergenic not near genes chr2L_5_18900001 chr2L_18900001 RAL-907 474 chr2L 18997742 18997761 chr2L 18997998 18998034 7 274 2.0 5.5 3.8 1.5 292 chr2L 18997742 intron CG31792 + chr2L 18997888 intron CG31792 + chr2L 18998034 exon CG31792 + chr2L_7_18995001 chr2L_18995001 RAL-907 475 chr2L 19109212 19109240 chr2L 19109308 19109335 15 95 3.0 5.0 4.0 3.0 123 chr2L 19109212 5` UTR CR44905 + chr2L 19109274 intron CR44905 + chr2L 19109335 intron CR44905 + chr2L_15_19105001 chr2L_19105001 RAL-907 476 chr2L 19189947 19190000 chr2L 19190121 19190127 11 168 2.5 0.0 1.2 5.0 180 chr2L 19189947 intergenic pigeon +,drl + chr2L 19190037 intergenic pigeon +,drl + chr2L 19190127 intergenic pigeon +,drl + chr2L_11_19190001 chr2L_19190001 RAL-907 477 chr2L 19218137 19218181 chr2L 19218462 19218496 12 323 3.0 5.0 4.0 2.4 359 chr2L 19218137 intergenic CR44189 + chr2L 19218316 intergenic CR44189 + chr2L 19218496 intergenic CR44189 + chr2L_12_19215001 chr2L_19215001 RAL-907 478 chr2L 19246113 19246137 chr2L 19246192 19246229 6 82 2.5 3.5 3.0 1.5 116 chr2L 19246113 intergenic not near genes chr2L 19246171 intergenic not near genes chr2L 19246229 intergenic not near genes chr2L_6_19245001 chr2L_19245001 RAL-907 479 chr2L 19345010 19345036 chr2L 19357229 19357263 blood 7 12224 1.5 2.5 2.0 2.3 12253 chr2L 19345010 intron dnt - chr2L 19351136 intron dnt - chr2L 19357263 intron dnt - chr2L_7_19350001 chr2L_19350001 RAL-907 480 chr2L 19357525 19357567 chr2L 19357635 19357676 10 109 4.0 5.0 4.5 1.8 151 chr2L 19357525 intron dnt - chr2L 19357600 intron dnt - chr2L 19357676 intron dnt - chr2L_10_19355001 chr2L_19355001 RAL-907 481 chr2L 19374477 19374513 chr2L 19374606 19374642 6 129 3.0 4.5 3.8 1.2 165 chr2L 19374477 intergenic not near genes chr2L 19374560 intergenic not near genes chr2L 19374642 intergenic not near genes chr2L_6_19370001 chr2L_19370001 RAL-907 482 chr2L 19378332 19378374 chr2L 19378422 19378483 8 100 2.0 0.5 1.2 3.6 151 chr2L 19378332 intergenic not near genes chr2L 19378408 intergenic not near genes chr2L 19378483 intergenic not near genes chr2L_8_19375001 chr2L_19375001 RAL-907 483 chr2L 19380500 19380529 chr2L 19380600 19380629 15 99 1.0 4.0 2.5 4.3 129 chr2L 19380500 intergenic CG17350 + chr2L 19380564 intergenic CG17350 + chr2L 19380629 intergenic CG17350 + chr2L_15_19380001 chr2L_19380001 RAL-907 484 chr2L 19405602 19405636 chr2L 19405712 19405735 12 108 4.0 2.0 3.0 3.0 133 chr2L 19405602 intron Pax - chr2L 19405668 intron Pax - chr2L 19405735 intron Pax - chr2L_12_19405001 chr2L_19405001 RAL-907 485 chr2L 19437512 19437523 chr2L 19437623 19437635 8 112 3.5 1.0 2.2 2.5 123 chr2L 19437512 intron CG10237 - chr2L 19437574 intron CG10237 - chr2L 19437635 intron CG10237 - chr2L_8_19435001 chr2L_19435001 RAL-907 486 chr2L 19441050 19441084 chr2L 19441147 19441181 15 97 5.0 7.0 6.0 2.1 131 chr2L 19441050 intron CG10237 - chr2L 19441116 intron CG10237 - chr2L 19441181 5` UTR CG10237 - chr2L_15_19440001 chr2L_19440001 RAL-907 487 chr2L 19520162 19520193 chr2L 19520261 19520292 13 99 4.5 4.0 4.2 2.5 130 chr2L 19520162 intron CG10132 + chr2L 19520227 intron CG10132 + chr2L 19520292 intron CG10132 + chr2L_13_19520001 chr2L_19520001 RAL-907 488 chr2L 19543107 19543156 chr2L 19543211 19543260 19 97 5.5 3.5 4.5 3.5 153 chr2L 19543107 intron ref(2)P + chr2L 19543184 intron ref(2)P + chr2L 19543260 intron ref(2)P + chr2L_19_19540001 chr2L_19540001 RAL-907 489 chr2L 19559985 19560025 chr2L 19560258 19560297 5 270 2.0 3.5 2.8 1.3 312 chr2L 19559985 exon Tep5 + chr2L 19560141 exon Tep5 + chr2L 19560297 intron Tep5 + chr2L_5_19560001 chr2L_19560001 RAL-907 490 chr2L 19560817 19560852 chr2L 19560917 19560952 5 100 2.5 0.0 1.2 2.3 135 chr2L 19560817 exon Tep5 + chr2L 19560884 exon Tep5 + chr2L 19560952 exon Tep5 + chr2L_5_19560001 chr2L_19560001 RAL-907 491 chr2L 19620108 19620125 chr2L 19621082 19621130 jockey 5 998 3.5 1.0 2.2 1.6 1022 chr2L 19620108 intron Lar + chr2L 19620619 intron Lar + chr2L 19621130 intron Lar + chr2L_5_19620001 chr2L_19620001 RAL-907 492 chr2L 19652565 19652599 chr2L 19674019 19674053 opus 11 21453 5.0 8.0 6.5 1.5 21488 chr2L 19652565 intron Lar + chr2L 19663309 intron Lar + chr2L 19674053 intron Lar + chr2L_11_19660001 chr2L_19660001 RAL-907 493 chr2L 19690308 19690345 chr2L 19690401 19690406 5 84 3.0 3.0 3.0 1.2 98 chr2L 19690308 intron Lar + chr2L 19690357 intron Lar + chr2L 19690406 intron Lar + chr2L_5_19690001 chr2L_19690001 RAL-907 494 chr2L 19703524 19703568 chr2L 19712680 19712702 roo 11 9150 7.5 10.0 8.8 1.1 9178 chr2L 19703524 intron Lar + chr2L 19708113 intron Lar + chr2L 19712702 intron Lar + chr2L_11_19705001 chr2L_19705001 RAL-907 495 chr2L 19737369 19737380 chr2L 19740826 19740839 1360 5 3461 2.5 4.0 3.2 1.2 3470 chr2L 19737369 intergenic Nf-YB + chr2L 19739104 intergenic not near genes chr2L 19740839 intergenic not near genes chr2L_5_19735001 chr2L_19735001 RAL-907 496 chr2L 19762794 19762840 chr2L 19763056 19763082 pogo 14 258 2.0 2.5 2.2 4.4 288 chr2L 19762794 5` UTR fbp - chr2L 19762938 intron fbp - chr2L 19763082 intron fbp - chr2L_14_19760001 chr2L_19760001 RAL-907 497 chr2L 19773151 19773191 chr2L 19773251 19773298 17 107 7.5 4.0 5.8 2.5 147 chr2L 19773151 intergenic not near genes chr2L 19773224 intergenic not near genes chr2L 19773298 intergenic not near genes chr2L_17_19770001 chr2L_19770001 RAL-907 498 chr2L 19824399 19824435 chr2L 19824502 19824533 8 102 1.5 4.5 3.0 2.0 134 chr2L 19824399 intron sick + chr2L 19824466 intron sick + chr2L 19824533 intron sick + chr2L_8_19820001 chr2L_19820001 RAL-907 499 chr2L 19837256 19837301 chr2L 19837356 19837391 13 99 4.0 2.5 3.2 3.1 135 chr2L 19837256 intron sick + chr2L 19837324 intron sick + chr2L 19837391 intron sick + chr2L_13_19835001 chr2L_19835001 RAL-907 500 chr2L 19846119 19846276 chr2L 19846248 19846377 9 114 0.0 0.0 0.0 9.0 258 chr2L 19846119 intron sick + chr2L 19846248 intron sick + chr2L 19846377 intron sick + chr2L_9_19845001 chr2L_19845001 RAL-907 501 chr2L 19944999 19945044 chr2L 19945131 19945176 10 127 1.0 4.0 2.5 2.9 177 chr2L 19944999 intron sick + chr2L 19945088 intron sick + chr2L 19945176 intron sick + chr2L_10_19945001 chr2L_19945001 RAL-907 502 chr2L 19986895 19986943 chr2L 19987115 19987155 10 217 27.0 26.0 26.5 0.4 260 chr2L 19986895 intron CG43861 - chr2L 19987025 intron CG43861 - chr2L 19987155 intron CG43861 - chr2L_10_19985001 chr2L_19985001 RAL-907 503 chr2L 20005854 20005894 chr2L 20010950 20010990 flea 12 5096 5.5 2.5 4.0 2.4 5136 chr2L 20005854 intron CG43861 - chr2L 20008422 intron CG43861 - chr2L 20010990 intron CG43861 - chr2L_12_20005001 chr2L_20005001 RAL-907 504 chr2L 20041413 20041460 chr2L 20041518 20041555 11 101 4.0 3.5 3.8 2.3 142 chr2L 20041413 intron sNPF + chr2L 20041484 intron sNPF + chr2L 20041555 intron sNPF + chr2L_11_20040001 chr2L_20040001 RAL-907 505 chr2L 20048096 20048147 chr2L 20048192 20048243 14 92 3.0 1.0 2.0 4.7 147 chr2L 20048096 intron sNPF + chr2L 20048170 intron sNPF + chr2L 20048243 intron sNPF + chr2L_14_20045001 chr2L_20045001 RAL-907 506 chr2L 20064224 20064243 chr2L 20064330 20064350 6 107 0.0 4.5 2.2 1.9 126 chr2L 20064224 3` UTR lok + chr2L 20064287 3` UTR,3` UTR lok +,vls - chr2L 20064350 3` UTR,3` UTR lok +,vls - chr2L_6_20060001 chr2L_20060001 RAL-907 507 chr2L 20069514 20069553 chr2L 20069614 20069648 9 94 3.5 4.5 4.0 1.8 134 chr2L 20069514 exon bwa + chr2L 20069581 intron bwa + chr2L 20069648 intron bwa + chr2L_9_20065001 chr2L_20065001 RAL-907 508 chr2L 20079494 20079548 chr2L 20079635 20079689 13 140 3.5 0.0 1.8 4.6 195 chr2L 20079494 intron,intron neb +,fok - chr2L 20079592 intron,intron neb +,fok - chr2L 20079689 intron,intron neb +,fok - chr2L_13_20075001 chr2L_20075001 RAL-907 509 chr2L 20122618 20122649 chr2L 20122728 20122756 4 108 4.5 2.5 3.5 0.9 138 chr2L 20122618 intergenic not near genes chr2L 20122687 intergenic not near genes chr2L 20122756 intergenic not near genes chr2L_4_20120001 chr2L_20120001 RAL-907 510 chr2L 20271076 20271123 chr2L 20271180 20271208 16 102 3.0 1.0 2.0 5.3 132 chr2L 20271076 intergenic not near genes chr2L 20271142 intergenic not near genes chr2L 20271208 intergenic not near genes chr2L_16_20270001 chr2L_20270001 RAL-907 511 chr2L 20272094 20272141 chr2L 20282825 20282863 copia 11 10729 5.5 8.0 6.8 1.4 10769 chr2L 20272094 intergenic not near genes chr2L 20277478 intergenic not near genes chr2L 20282863 intergenic not near genes chr2L_11_20275001 chr2L_20275001 RAL-907 512 chr2L 20310874 20310889 chr2L 20310974 20310989 5 100 0.5 2.5 1.5 2.0 115 chr2L 20310874 intergenic spir + chr2L 20310932 intergenic spir + chr2L 20310989 intergenic spir + chr2L_5_20310001 chr2L_20310001 RAL-907 513 chr2L 20320022 20320066 chr2L 20320146 20320204 9 125 4.0 0.0 2.0 3.0 182 chr2L 20320022 intron spir + chr2L 20320113 intron spir + chr2L 20320204 intron spir + chr2L_9_20320001 chr2L_20320001 RAL-907 514 chr2L 20372215 20372253 chr2L 20372476 20372514 pogo 12 260 3.5 4.0 3.8 2.5 299 chr2L 20372215 intergenic Ugt37a1 - chr2L 20372364 intergenic Ugt37a1 - chr2L 20372514 exon Ugt37a1 - chr2L_12_20370001 chr2L_20370001 RAL-907 515 chr2L 20498670 20498705 chr2L 20498789 20498824 13 117 1.5 5.0 3.2 3.1 154 chr2L 20498670 intergenic not near genes chr2L 20498747 intergenic not near genes chr2L 20498824 intergenic not near genes chr2L_13_20495001 chr2L_20495001 RAL-907 516 chr2L 20500394 20500440 chr2L 20500494 20500540 18 99 3.5 2.0 2.8 4.7 146 chr2L 20500394 intergenic not near genes chr2L 20500467 intergenic not near genes chr2L 20500540 intergenic not near genes chr2L_18_20500001 chr2L_20500001 RAL-907 517 chr2L 20568642 20568680 chr2L 20569052 20569090 X-element 13 410 6.0 0.5 3.2 3.1 448 chr2L 20568642 intron CR45347 + chr2L 20568866 intron CR45347 + chr2L 20569090 intron CR45347 + chr2L_13_20565001 chr2L_20565001 RAL-907 518 chr2L 20576219 20576246 chr2L 20583692 20583733 blood 8 7482 3.5 1.5 2.5 2.3 7514 chr2L 20576219 intergenic CR45347 + chr2L 20579976 intergenic not near genes chr2L 20583733 3` UTR CR44909 - chr2L_8_20575001 chr2L_20575001 RAL-907 519 chr2L 20601770 20601813 chr2L 20601868 20601911 22 97 3.5 2.0 2.8 5.8 141 chr2L 20601770 intron CR44909 - chr2L 20601840 intron CR44909 - chr2L 20601911 intron CR44909 - chr2L_22_20600001 chr2L_20600001 RAL-907 520 chr2L 20602718 20602748 chr2L 20602806 20602856 8 106 1.0 2.0 1.5 3.2 138 chr2L 20602718 intron CR44909 - chr2L 20602787 intron CR44909 - chr2L 20602856 intron CR44909 - chr2L_8_20600001 chr2L_20600001 RAL-907 521 chr2L 20668669 20668719 chr2L 20668765 20668806 17 94 7.5 5.0 6.2 2.4 137 chr2L 20668669 intron CG31678 - chr2L 20668738 intron CG31678 - chr2L 20668806 intron CG31678 - chr2L_17_20665001 chr2L_20665001 RAL-907 522 chr2L 20674811 20674864 chr2L 20674916 20674962 11 100 2.0 0.0 1.0 5.5 151 chr2L 20674811 intron CG31678 - chr2L 20674886 intron CG31678 - chr2L 20674962 intron CG31678 - chr2L_11_20670001 chr2L_20670001 RAL-907 523 chr2L 20687082 20687106 chr2L 20687181 20687205 6 97 1.0 3.0 2.0 2.0 123 chr2L 20687082 intron Hr38 - chr2L 20687144 intron Hr38 - chr2L 20687205 intron Hr38 - chr2L_6_20685001 chr2L_20685001 RAL-907 524 chr2L 20692229 20692270 chr2L 20692334 20692378 17 108 4.0 2.0 3.0 4.2 149 chr2L 20692229 intron Hr38 - chr2L 20692304 intron Hr38 - chr2L 20692378 intron Hr38 - chr2L_17_20690001 chr2L_20690001 RAL-907 525 chr2L 20819096 20819145 chr2L 20819200 20819249 17 102 1.5 2.5 2.0 5.7 153 chr2L 20819096 intergenic not near genes chr2L 20819172 intergenic not near genes chr2L 20819249 intergenic not near genes chr2L_17_20815001 chr2L_20815001 RAL-907 526 chr2L 20821483 20821520 chr2L 20821651 20821688 8 166 3.5 2.5 3.0 2.0 205 chr2L 20821483 intergenic not near genes chr2L 20821586 intergenic not near genes chr2L 20821688 intergenic not near genes chr2L_8_20820001 chr2L_20820001 RAL-907 527 chr2L 20839729 20839766 chr2L 20839837 20839867 6 107 4.5 7.0 5.8 0.9 138 chr2L 20839729 intergenic not near genes chr2L 20839798 intergenic not near genes chr2L 20839867 intergenic not near genes chr2L_6_20835001 chr2L_20835001 RAL-907 528 chr2L 20928902 20928909 chr2L 20929462 20929469 5 560 6.5 11.0 8.8 0.5 567 chr2L 20928902 intergenic not near genes chr2L 20929186 intergenic CG9270 - chr2L 20929469 3` UTR CG9270 - chr2L_5_20925001 chr2L_20925001 RAL-907 529 chr2L 20946931 20946960 chr2L 20947038 20947067 11 105 3.0 4.0 3.5 2.4 136 chr2L 20946931 intergenic CR44606 - chr2L 20946999 intergenic CR44606 - chr2L 20947067 intergenic CR44606 - chr2L_11_20945001 chr2L_20945001 RAL-907 530 chr2L 20976645 20976682 chr2L 20981479 20981487 X-element 10 4830 3.5 3.0 3.2 2.4 4842 chr2L 20976645 intron CG42238 - chr2L 20979066 intron CG42238 - chr2L 20981487 intron CG42238 - chr2L_10_20975001 chr2L_20975001 RAL-907 531 chr2L 20991028 20991057 chr2L 20991126 20991155 9 98 3.5 2.5 3.0 2.2 127 chr2L 20991028 intron CG42238 - chr2L 20991092 intron CG42238 - chr2L 20991155 intron CG42238 - chr2L_9_20990001 chr2L_20990001 RAL-907 532 chr2L 21020252 21020304 chr2L 21023949 21023992 NOF 13 3692 7.5 2.0 4.8 2.2 3740 chr2L 21020252 intron CG42238 - chr2L 21022122 intron CG42238 - chr2L 21023992 intron CG42238 - chr2L_13_21020001 chr2L_21020001 RAL-907 533 chr2L 21110633 21110682 chr2L 21110738 21110787 11 105 1.5 1.0 1.2 5.0 154 chr2L 21110633 intron Nhe2 + chr2L 21110710 intron Nhe2 + chr2L 21110787 intron Nhe2 + chr2L_11_21110001 chr2L_21110001 RAL-907 534 chr2L 21286584 21286622 chr2L 21286682 21286719 15 98 2.0 5.5 3.8 3.1 135 chr2L 21286584 exon Mio - chr2L 21286652 intron Mio - chr2L 21286719 intron Mio - chr2L_15_21285001 chr2L_21285001 RAL-907 535 chr2L 9778708 9778711 chr2L 21301759 21301763 5 11523051 6.5 8.5 7.5 0.6 11523055 chr2L 9778708 intergenic not near genes chr2L 15540236 intergenic not near genes chr2L 21301763 intron Mio - chr2L_5_15540001 chr2L_15540001 RAL-907 536 chr2L 21315116 21315154 chr2L 21315220 21315259 12 101 9.0 5.0 7.0 1.5 143 chr2L 21315116 intron crc + chr2L 21315188 intron crc + chr2L 21315259 intron crc + chr2L_12_21315001 chr2L_21315001 RAL-907 537 chr2L 21347534 21347583 chr2L 21355026 21355074 blood 15 7489 3.5 7.5 5.5 2.3 7540 chr2L 21347534 intron Tsp39D + chr2L 21351304 intron Tsp39D + chr2L 21355074 intron Tsp39D + chr2L_15_21350001 chr2L_21350001 RAL-907 538 chr2L 21377455 21377492 chr2L 21378036 21378073 11 581 5.5 2.5 4.0 2.2 618 chr2L 21377455 3` UTR CG8665 + chr2L 21377764 3` UTR CG8665 + chr2L 21378073 intergenic CG8665 + chr2L_11_21375001 chr2L_21375001 RAL-907 539 chr2L 21653193 21653223 chr2L 21656517 21656547 invader4 8 3324 0.5 8.5 4.5 1.5 3354 chr2L 21653193 intergenic not near genes chr2L 21654870 intergenic not near genes chr2L 21656547 intergenic not near genes chr2L_8_21650001 chr2L_21650001 RAL-907 540 chr2L 21665636 21665680 chr2L 21665739 21665783 8 103 2.0 2.5 2.2 2.5 147 chr2L 21665636 intron CG2225 - chr2L 21665710 intron CG2225 - chr2L 21665783 intron CG2225 - chr2L_8_21665001 chr2L_21665001 RAL-907 541 chr2L 21691660 21691670 chr2L 21691756 21691766 4 96 3.5 11.5 7.5 0.5 106 chr2L 21691660 intron CG31619 + chr2L 21691713 intron CG31619 + chr2L 21691766 intron CG31619 + chr2L_4_21690001 chr2L_21690001 RAL-907 542 chr2L 21691810 21691822 chr2L 21698300 21698312 Burdock 6 6489 15.5 1.5 8.5 0.6 6502 chr2L 21691810 intron CG31619 + chr2L 21695061 intron CG31619 + chr2L 21698312 intron CG31619 + chr2L_6_21695001 chr2L_21695001 RAL-907 543 chr2L 21691825 21691857 chr2L 21698298 21698312 Burdock 11 6477 7.5 1.5 4.5 2.0 6487 chr2L 21691825 intron CG31619 + chr2L 21695068 intron CG31619 + chr2L 21698312 intron CG31619 + chr2L_11_21695001 chr2L_21695001 RAL-907 544 chr2L 21757721 21757765 chr2L 21757818 21757861 9 97 3.5 2.5 3.0 2.2 140 chr2L 21757721 intergenic step -,CG1416 + chr2L 21757791 intergenic CG1416 +,step - chr2L 21757861 intergenic CG1416 +,step - chr2L_9_21755001 chr2L_21755001 RAL-907 545 chr2L 21806227 21806256 chr2L 21806327 21806377 6 107 4.5 5.5 5.0 1.0 150 chr2L 21806227 intergenic not near genes chr2L 21806302 intergenic not near genes chr2L 21806377 intergenic not near genes chr2L_6_21805001 chr2L_21805001 RAL-907 546 chr2L 21838271 21838316 chr2L 21838479 21838486 4 188 3.0 2.5 2.8 1.1 215 chr2L 21838271 intergenic not near genes chr2L 21838378 intergenic not near genes chr2L 21838486 intergenic not near genes chr2L_4_21835001 chr2L_21835001 RAL-907 547 chr2L 21852357 21852405 chr2L 21852691 21852725 10 333 2.5 4.5 3.5 2.2 368 chr2L 21852357 intergenic not near genes chr2L 21852541 intergenic not near genes chr2L 21852725 intergenic not near genes chr2L_10_21850001 chr2L_21850001 RAL-907 548 chr2L 21969334 21969371 chr2L 21969430 21969467 7 95 2.0 4.0 3.0 1.8 133 chr2L 21969334 intergenic not near genes chr2L 21969400 intergenic not near genes chr2L 21969467 intergenic not near genes chr2L_7_21965001 chr2L_21965001 RAL-907 549 chr2L 21981666 21981712 chr2L 21990851 21990897 roo 12 9184 2.0 4.0 3.0 3.0 9231 chr2L 21981666 exon CG2528 - chr2L 21986282 intron CG2528 - chr2L 21990897 exon CG2528 - chr2L_12_21985001 chr2L_21985001 RAL-907 550 chr2L 21996933 21996972 chr2L 21997026 21997073 12 98 2.5 4.5 3.5 2.7 140 chr2L 21996933 intergenic not near genes chr2L 21997003 intergenic not near genes chr2L 21997073 intergenic not near genes chr2L_12_21995001 chr2L_21995001 RAL-907 551 chr2L 22047233 22047241 chr2L 22047378 22047386 4 145 6.0 4.5 5.2 0.6 153 chr2L 22047233 intergenic not near genes chr2L 22047310 intergenic not near genes chr2L 22047386 intergenic not near genes chr2L_4_22045001 chr2L_22045001 RAL-907 552 chr2L 22058737 22058790 chr2L 22059566 22059619 14 828 3.5 5.5 4.5 2.5 882 chr2L 22058737 intergenic not near genes chr2L 22059178 intergenic not near genes chr2L 22059619 intergenic not near genes chr2L_14_22055001 chr2L_22055001 RAL-907 553 chr2L 22077287 22077308 chr2L 22077383 22077409 4 100 2.5 3.0 2.8 1.1 122 chr2L 22077287 intergenic not near genes chr2L 22077348 intergenic not near genes chr2L 22077409 intergenic not near genes chr2L_4_22075001 chr2L_22075001 RAL-907 554 chr2L 22164955 22164994 chr2L 22165098 22165142 4 147 2.5 1.0 1.8 1.4 187 chr2L 22164955 3` UTR CG42748 + chr2L 22165048 3` UTR CG42748 + chr2L 22165142 3` UTR CG42748 + chr2L_4_22165001 chr2L_22165001 RAL-907 555 chr2L 22165504 22165541 chr2L 22165609 22165646 4 105 2.0 2.0 2.0 1.3 142 chr2L 22165504 3` UTR CG42748 + chr2L 22165575 3` UTR CG42748 + chr2L 22165646 3` UTR CG42748 + chr2L_4_22165001 chr2L_22165001 RAL-907 556 chr2L 22212119 22212160 chr2L 22212686 22212725 17 567 2.5 2.5 2.5 4.9 606 chr2L 22212119 intron Ir40a - chr2L 22212422 intron Ir40a - chr2L 22212725 exon Ir40a - chr2L_17_22210001 chr2L_22210001 RAL-907 557 chr2L 22215890 22215922 chr2L 22215996 22216023 8 105 6.0 8.0 7.0 1.0 133 chr2L 22215890 intergenic not near genes chr2L 22215956 intergenic not near genes chr2L 22216023 intergenic not near genes chr2L_8_22215001 chr2L_22215001 RAL-907 558 chr2L 22258593 22258633 chr2L 22260738 22260778 G6 11 2145 4.0 4.5 4.2 2.1 2185 chr2L 22258593 intergenic Tif-IA + chr2L 22259686 intergenic not near genes chr2L 22260778 intergenic not near genes chr2L_11_22255001 chr2L_22255001 RAL-907 559 chr2L 22294661 22294696 chr2L 22294758 22294793 6 97 4.5 1.5 3.0 1.5 132 chr2L 22294661 intergenic not near genes chr2L 22294727 intergenic not near genes chr2L 22294793 intergenic not near genes chr2L_6_22290001 chr2L_22290001 RAL-907 560 chr2L 22345121 22345138 chr2L 22345408 22345425 4 286 2.5 4.0 3.2 1.0 304 chr2L 22345121 intron CG17018 + chr2L 22345273 intron CG17018 + chr2L 22345425 intron CG17018 + chr2L_4_22345001 chr2L_22345001 RAL-907 561 chr2L 22534593 22534629 chr2L 22534709 22534735 11 119 2.0 4.5 3.2 2.6 142 chr2L 22534593 3` UTR RpL5 - chr2L 22534664 3` UTR RpL5 - chr2L 22534735 3` UTR RpL5 - chr2L_11_22530001 chr2L_22530001 RAL-907 562 chr2L 22537427 22537455 chr2L 22537610 22537661 6 202 4.5 1.0 2.8 1.6 234 chr2L 22537427 intergenic not near genes chr2L 22537544 intergenic not near genes chr2L 22537661 intergenic not near genes chr2L_6_22535001 chr2L_22535001 RAL-907 563 chr2L 22581958 22582002 chr2L 22583767 22583811 S-element 13 1806 1.5 4.5 3.0 3.2 1853 chr2L 22581958 intron CG17494 + chr2L 22582884 intron CG17494 + chr2L 22583811 intron CG17494 + chr2L_13_22580001 chr2L_22580001 RAL-907 564 chr2L 22743633 22743678 chr2L 22744066 22744111 15 432 2.0 2.5 2.2 4.7 478 chr2L 22743633 intron CG40006 - chr2L 22743872 intron CG40006 - chr2L 22744111 intron CG40006 - chr2L_15_22740001 chr2L_22740001 RAL-907 565 chr2L 22776405 22776452 chr2L 22778214 22778261 S-element 16 1809 2.5 7.0 4.8 2.8 1856 chr2L 22776405 intergenic not near genes chr2L 22777333 intergenic not near genes chr2L 22778261 intergenic not near genes chr2L_16_22775001 chr2L_22775001 RAL-907 566 chr2L 23006681 23006702 chr2L 23007000 23007003 4 315 5.5 1.0 3.2 1.0 322 chr2L 23006681 intron Cht3 - chr2L 23006842 intron Cht3 - chr2L 23007003 intron Cht3 - chr2L_4_23005001 chr2L_23005001 RAL-907 567 chr2R 652503 652536 chr2R 652877 652879 5 364 8.0 5.5 6.8 0.6 376 chr2R 652503 intergenic not near genes chr2R 652691 intergenic not near genes chr2R 652879 intergenic not near genes chr2R_5_650001 chr2R_650001 RAL-907 568 chr2R 699101 699113 chr2R 705337 705349 297 5 6236 8.0 3.5 5.8 0.7 6248 chr2R 699101 intron CG43676 + chr2R 702225 intron CG43676 + chr2R 705349 intron CG43676 + chr2R_5_700001 chr2R_700001 RAL-907 569 chr2R 1320198 1320201 chr2R 11463556 11463556 invader1 9 10143355 23.0 10.0 16.5 0.5 10143358 chr2R 1320198 intergenic not near genes chr2R 6391877 intergenic not near genes chr2R 11463556 3` UTR E(Pc) + chr2R_9_6390001 chr2R_6390001 RAL-907 570 chr2R 1320204 1320204 chr2R 21358403 21358403 4 20038199 23.0 3.0 13.0 0.3 20038199 chr2R 1320204 intergenic not near genes chr2R 11339304 exon zetaTry - chr2R 21358403 intron cv-2 - chr2R_4_11335001 chr2R_11335001 RAL-907 571 chr2R 1365850 1365892 chr2R 1365981 1366024 9 123 1.5 3.5 2.5 2.6 174 chr2R 1365850 intron l(2)41Ab + chr2R 1365937 intron l(2)41Ab + chr2R 1366024 intron l(2)41Ab + chr2R_9_1365001 chr2R_1365001 RAL-907 572 chr2R 1516589 1516599 chr2R 1521337 1521347 1731 4 4748 8.0 8.0 8.0 0.4 4758 chr2R 1516589 exon Maf1 - chr2R 1518968 intron Maf1 - chr2R 1521347 5` UTR Maf1 - chr2R_4_1515001 chr2R_1515001 RAL-907 573 chr2R 2015124 2015165 chr2R 2015211 2015262 8 87 4.0 2.5 3.2 1.9 138 chr2R 2015124 intron CG17684 - chr2R 2015193 intron CG17684 - chr2R 2015262 intron CG17684 - chr2R_8_2015001 chr2R_2015001 RAL-907 574 chr2R 2110487 2110497 chr2R 2118065 2118065 17.6 4 7576 6.0 4.5 5.2 0.6 7578 chr2R 2110487 intron CG17684 - chr2R 2114276 intron CG17684 - chr2R 2118065 intron CG17684 - chr2R_4_2110001 chr2R_2110001 RAL-907 575 chr2R 2498978 2499016 chr2R 2508132 2508183 roo 4 9164 3.5 5.0 4.2 0.8 9205 chr2R 2498978 intron MFS17 - chr2R 2503580 intron MFS17 - chr2R 2508183 intron MFS17 - chr2R_4_2500001 chr2R_2500001 RAL-907 576 chr2R 2508289 2508339 chr2R 2508446 2508494 6 157 2.5 5.0 3.8 1.2 205 chr2R 2508289 intron MFS17 - chr2R 2508392 intron MFS17 - chr2R 2508494 intron MFS17 - chr2R_6_2505001 chr2R_2505001 RAL-907 577 chr2R 3515271 3515311 chr2R 3515379 3515419 7 108 10.0 12.0 11.0 0.6 148 chr2R 3515271 intergenic not near genes chr2R 3515345 intergenic not near genes chr2R 3515419 intergenic not near genes chr2R_7_3515001 chr2R_3515001 RAL-907 578 chr2R 3532623 3532641 chr2R 3536086 3536104 Doc 7 3463 4.5 4.0 4.2 1.3 3481 chr2R 3532623 intergenic not near genes chr2R 3534364 intergenic not near genes chr2R 3536104 intergenic not near genes chr2R_7_3530001 chr2R_3530001 RAL-907 579 chr2R 4634166 4634170 chr2R 4634243 4634256 5 88 6.0 3.0 4.5 0.9 90 chr2R 4634166 intergenic not near genes chr2R 4634211 intergenic not near genes chr2R 4634256 intergenic not near genes chr2R_5_4630001 chr2R_4630001 RAL-907 580 chr2R 4656776 4656815 chr2R 4656894 4656896 7 108 4.0 1.0 2.5 2.0 120 chr2R 4656776 intergenic not near genes chr2R 4656836 intergenic not near genes chr2R 4656896 intergenic not near genes chr2R_7_4655001 chr2R_4655001 RAL-907 581 chr2R 5019261 5019307 chr2R 5019367 5019413 14 102 2.5 3.5 3.0 3.5 152 chr2R 5019261 intron Ir41a + chr2R 5019337 intron Ir41a + chr2R 5019413 intron Ir41a + chr2R_14_5015001 chr2R_5015001 RAL-907 582 chr2R 5075931 5075969 chr2R 5076073 5076111 5 142 18.5 24.5 21.5 0.2 180 chr2R 5075931 intergenic not near genes chr2R 5076021 intergenic not near genes chr2R 5076111 intergenic not near genes chr2R_5_5075001 chr2R_5075001 RAL-907 583 chr2R 5080802 5080818 chr2R 5080891 5080929 9 106 1.5 7.5 4.5 1.6 127 chr2R 5080802 intergenic not near genes chr2R 5080866 intergenic not near genes chr2R 5080929 intergenic not near genes chr2R_9_5080001 chr2R_5080001 RAL-907 584 chr2R 5087181 5087205 chr2R 5087276 5087276 5 104 4.0 4.0 4.0 1.0 95 chr2R 5087181 intergenic not near genes chr2R 5087228 intergenic not near genes chr2R 5087276 intergenic not near genes chr2R_5_5085001 chr2R_5085001 RAL-907 585 chr2R 5192706 5192728 chr2R 5192803 5192825 11 97 2.0 2.0 2.0 3.7 119 chr2R 5192706 intron Nipped-A - chr2R 5192766 intron Nipped-A - chr2R 5192825 intron Nipped-A - chr2R_11_5190001 chr2R_5190001 RAL-907 586 chr2R 5256743 5256790 chr2R 5256851 5256898 8 107 4.0 4.5 4.2 1.5 155 chr2R 5256743 intergenic not near genes chr2R 5256820 intergenic not near genes chr2R 5256898 intergenic not near genes chr2R_8_5255001 chr2R_5255001 RAL-907 587 chr2R 5303480 5303522 chr2R 5303588 5303630 11 107 4.5 4.5 4.5 2.0 150 chr2R 5303480 intergenic not near genes chr2R 5303555 intergenic not near genes chr2R 5303630 intergenic not near genes chr2R_11_5300001 chr2R_5300001 RAL-907 588 chr2R 5417984 5418027 chr2R 5420625 5420659 Burdock 14 2641 2.5 5.0 3.8 2.9 2675 chr2R 5417984 intron laccase2 + chr2R 5419322 intron laccase2 + chr2R 5420659 intron laccase2 + chr2R_14_5415001 chr2R_5415001 RAL-907 589 chr2R 5463118 5463141 chr2R 5463446 5463479 6 332 3.5 0.5 2.0 2.0 361 chr2R 5463118 intergenic not near genes chr2R 5463298 intergenic not near genes chr2R 5463479 intergenic not near genes chr2R_6_5460001 chr2R_5460001 RAL-907 590 chr2R 5509504 5509547 chr2R 5509620 5509663 20 115 2.0 3.0 2.5 5.7 159 chr2R 5509504 intron CG30438 + chr2R 5509584 intron CG30438 + chr2R 5509663 intron CG30438 + chr2R_20_5505001 chr2R_5505001 RAL-907 591 chr2R 5653341 5653386 chr2R 5653460 5653505 11 119 4.5 1.0 2.8 2.9 164 chr2R 5653341 intergenic CG1344 + chr2R 5653423 intergenic CG1344 + chr2R 5653505 intergenic CG1344 + chr2R_11_5650001 chr2R_5650001 RAL-907 592 chr2R 5664273 5664313 chr2R 5664361 5664413 11 98 0.5 1.0 0.8 6.1 140 chr2R 5664273 5` UTR CR45472 + chr2R 5664343 intron CR45472 + chr2R 5664413 intron CR45472 + chr2R_11_5660001 chr2R_5660001 RAL-907 593 chr2R 5674578 5674616 chr2R 5674676 5674719 4 102 1.0 2.5 1.8 1.4 141 chr2R 5674578 intergenic not near genes chr2R 5674648 intergenic not near genes chr2R 5674719 intergenic not near genes chr2R_4_5670001 chr2R_5670001 RAL-907 594 chr2R 5772548 5772841 chr2R 5772647 5772943 8 102 4.0 5.0 4.5 1.5 395 chr2R 5772548 3` UTR Gp210 + chr2R 5772746 3` UTR Gp210 + chr2R 5772943 3` UTR Gp210 + chr2R_8_5770001 chr2R_5770001 RAL-907 595 chr2R 5790447 5790492 chr2R 5790551 5790597 18 104 4.5 5.0 4.8 3.1 150 chr2R 5790447 intergenic not near genes chr2R 5790522 intergenic not near genes chr2R 5790597 intergenic not near genes chr2R_18_5790001 chr2R_5790001 RAL-907 596 chr2R 5859962 5860009 chr2R 5860094 5860134 9 127 5.0 2.5 3.8 1.9 172 chr2R 5859962 3` UTR dpr12 + chr2R 5860048 3` UTR dpr12 + chr2R 5860134 3` UTR dpr12 + chr2R_9_5860001 chr2R_5860001 RAL-907 597 chr2R 5869255 5869307 chr2R 5874351 5874403 flea 11 5092 3.5 1.0 2.2 3.4 5148 chr2R 5869255 intergenic not near genes chr2R 5871829 intergenic not near genes chr2R 5874403 intergenic not near genes chr2R_11_5870001 chr2R_5870001 RAL-907 598 chr2R 5878909 5878930 chr2R 5879012 5879033 4 103 4.5 3.5 4.0 0.8 124 chr2R 5878909 intergenic CG44438 - chr2R 5878971 intergenic CG44438 - chr2R 5879033 intergenic CG44438 - chr2R_4_5875001 chr2R_5875001 RAL-907 599 chr2R 5885347 5885363 chr2R 5885496 5885512 4 149 4.0 2.5 3.2 1.0 165 chr2R 5885347 5` UTR CR44125 + chr2R 5885430 5` UTR CR44125 + chr2R 5885512 5` UTR CR44125 + chr2R_4_5885001 chr2R_5885001 RAL-907 600 chr2R 5902150 5902159 chr2R 5909729 5909738 17.6 6 7577 5.5 4.0 4.8 1.0 7588 chr2R 5902150 intron CG43366 + chr2R 5905944 intron CG43366 + chr2R 5909738 intron CG43366 + chr2R_6_5905001 chr2R_5905001 RAL-907 601 chr2R 6033448 6033474 chr2R 6033529 6033564 4 93 1.5 3.0 2.2 1.2 116 chr2R 6033448 intron SCAP - chr2R 6033506 intron SCAP - chr2R 6033564 intron SCAP - chr2R_4_6030001 chr2R_6030001 RAL-907 602 chr2R 6129315 6129353 chr2R 6129413 6129451 12 95 5.5 1.5 3.5 2.7 136 chr2R 6129315 intron EcR - chr2R 6129383 intron EcR - chr2R 6129451 intron EcR - chr2R_12_6125001 chr2R_6125001 RAL-907 603 chr2R 6178104 6178139 chr2R 6178250 6178283 13 145 3.0 4.0 3.5 2.9 179 chr2R 6178104 intergenic not near genes chr2R 6178194 intergenic not near genes chr2R 6178283 intergenic not near genes chr2R_13_6175001 chr2R_6175001 RAL-907 604 chr2R 6194681 6194697 chr2R 6194776 6194791 5 99 8.0 2.5 5.2 0.8 110 chr2R 6194681 intron Ptr - chr2R 6194736 intron Ptr - chr2R 6194791 intron Ptr - chr2R_5_6190001 chr2R_6190001 RAL-907 605 chr2R 6494512 6494549 chr2R 6499293 6499331 F-element 11 4781 3.0 3.5 3.2 2.6 4819 chr2R 6494512 intergenic not near genes chr2R 6496922 intergenic not near genes chr2R 6499331 intergenic not near genes chr2R_11_6495001 chr2R_6495001 RAL-907 606 chr2R 6530749 6530791 chr2R 6530849 6530891 22 100 6.0 5.0 5.5 3.4 142 chr2R 6530749 intron jing + chr2R 6530820 intron jing + chr2R 6530891 intron jing + chr2R_22_6530001 chr2R_6530001 RAL-907 607 chr2R 6551342 6551388 chr2R 6551451 6551477 7 106 1.5 2.0 1.8 2.5 135 chr2R 6551342 intron jing + chr2R 6551410 intron jing + chr2R 6551477 intron jing + chr2R_7_6550001 chr2R_6550001 RAL-907 608 chr2R 6579756 6579797 chr2R 6584862 6584903 flea 12 5106 9.5 4.5 7.0 1.5 5147 chr2R 6579756 intron jing + chr2R 6582330 intron jing + chr2R 6584903 intron jing + chr2R_12_6580001 chr2R_6580001 RAL-907 609 chr2R 6607653 6607691 chr2R 6607745 6607798 16 100 2.0 2.5 2.2 5.0 145 chr2R 6607653 intron jing + chr2R 6607726 intron jing + chr2R 6607798 intron jing + chr2R_16_6605001 chr2R_6605001 RAL-907 610 chr2R 6633176 6633225 chr2R 6633273 6633322 21 96 1.0 1.0 1.0 10.5 146 chr2R 6633176 intergenic Vha16-1 -,Trap1 - chr2R 6633249 intergenic Vha16-1 -,Trap1 - chr2R 6633322 intergenic Vha16-1 -,Trap1 - chr2R_21_6630001 chr2R_6630001 RAL-907 611 chr2R 6699577 6699623 chr2R 6699681 6699726 8 105 3.5 3.0 3.2 1.9 149 chr2R 6699577 intergenic Rab2 + chr2R 6699652 intergenic Rab2 + chr2R 6699726 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_8_6695001 chr2R_6695001 RAL-907 612 chr2R 6711718 6711767 chr2R 6711827 6711876 25 107 4.5 4.0 4.2 4.8 158 chr2R 6711718 intron,intron CG3409 -,CG45092 - chr2R 6711797 intron,intron CG3409 -,CG45092 - chr2R 6711876 intron,intron CG3409 -,CG45092 - chr2R_25_6710001 chr2R_6710001 RAL-907 613 chr2R 6818320 6818374 chr2R 6818431 6818485 20 108 1.0 2.5 1.8 7.1 165 chr2R 6818320 intergenic koi + chr2R 6818402 intergenic koi + chr2R 6818485 intergenic koi + chr2R_20_6815001 chr2R_6815001 RAL-907 614 chr2R 6841248 6841290 chr2R 6841370 6841400 8 120 3.0 3.0 3.0 2.0 152 chr2R 6841248 intergenic CR44166 + chr2R 6841324 intergenic CR44166 + chr2R 6841400 intergenic CR44166 + chr2R_8_6840001 chr2R_6840001 RAL-907 615 chr2R 6947584 6947636 chr2R 6951460 6951463 14 3861 11.0 14.0 12.5 1.0 3879 chr2R 6947584 intron,intron mim -,CheB42c - chr2R 6949524 intron,intron,exon mim -,CheB42c -,CheB42a + chr2R 6951463 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R_14_6945001 chr2R_6945001 RAL-907 616 chr2R 6952151 6952185 chr2R 6959751 6959785 opus 23 7600 4.0 14.0 9.0 2.3 7634 chr2R 6952151 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955968 intron,intron mim -,CheB42c - chr2R 6959785 intron,intron mim -,CheB42c - chr2R_23_6955001 chr2R_6955001 RAL-907 617 chr2R 6947670 6947703 chr2R 6959821 6959854 opus 7 12156 5.5 28.0 16.8 0.4 12184 chr2R 6947670 intron,intron mim -,CheB42c - chr2R 6953762 intron,intron mim -,CheB42c - chr2R 6959854 intron,intron mim -,CheB42c - chr2R_7_6950001 chr2R_6950001 RAL-907 618 chr2R 6962441 6962478 chr2R 6962809 6962855 12 375 2.0 3.0 2.5 3.4 414 chr2R 6962441 intron,intron mim -,CheB42c - chr2R 6962648 intron,intron mim -,CheB42c - chr2R 6962855 intron,intron mim -,CheB42c - chr2R_12_6960001 chr2R_6960001 RAL-907 619 chr2R 7180986 7181022 chr2R 7181082 7181118 10 96 3.5 7.0 5.2 1.6 132 chr2R 7180986 intron pk + chr2R 7181052 intron pk + chr2R 7181118 intron pk + chr2R_10_7180001 chr2R_7180001 RAL-907 620 chr2R 7196553 7196589 chr2R 7201348 7201383 F-element 17 4795 6.0 0.0 3.0 4.2 4830 chr2R 7196553 intron pk + chr2R 7198968 intron pk + chr2R 7201383 intron pk + chr2R_17_7195001 chr2R_7195001 RAL-907 621 chr2R 7209847 7209849 chr2R 7217615 7217617 roo 4 7768 4.0 6.5 5.2 0.6 7770 chr2R 7209847 intron pk + chr2R 7213732 intron pk + chr2R 7217617 intron pk + chr2R_4_7210001 chr2R_7210001 RAL-907 622 chr2R 7209854 7209871 chr2R 7217609 7217628 roo 10 7763 2.5 5.5 4.0 2.0 7774 chr2R 7209854 intron pk + chr2R 7213741 intron pk + chr2R 7217628 intron pk + chr2R_10_7210001 chr2R_7210001 RAL-907 623 chr2R 7235808 7235847 chr2R 7240916 7240957 jockey 6 5100 4.5 4.0 4.2 1.2 5149 chr2R 7235808 intergenic not near genes chr2R 7238382 intergenic not near genes chr2R 7240957 intergenic not near genes chr2R_6_7235001 chr2R_7235001 RAL-907 624 chr2R 7262193 7262214 chr2R 7269265 7269289 297 5 7074 3.5 10.5 7.0 0.6 7096 chr2R 7262193 intergenic not near genes chr2R 7265741 intergenic not near genes chr2R 7269289 intergenic not near genes chr2R_5_7265001 chr2R_7265001 RAL-907 625 chr2R 7272226 7272285 chr2R 7272338 7272365 6 101 0.0 0.5 0.2 5.0 139 chr2R 7272226 intergenic Br140 - chr2R 7272296 3` UTR Br140 - chr2R 7272365 3` UTR Br140 - chr2R_6_7270001 chr2R_7270001 RAL-907 626 chr2R 7290179 7290223 chr2R 7290300 7290345 8 119 1.5 6.0 3.8 1.7 166 chr2R 7290179 intron pwn + chr2R 7290262 intron pwn + chr2R 7290345 intron pwn + chr2R_8_7290001 chr2R_7290001 RAL-907 627 chr2R 7353368 7353377 chr2R 7353494 7353503 4 126 6.5 1.5 4.0 0.8 135 chr2R 7353368 intron Dscam1 - chr2R 7353436 intron Dscam1 - chr2R 7353503 intron Dscam1 - chr2R_4_7350001 chr2R_7350001 RAL-907 628 chr2R 7353378 7353419 chr2R 7353492 7353545 13 122 1.5 1.0 1.2 5.9 167 chr2R 7353378 intron Dscam1 - chr2R 7353462 intron Dscam1 - chr2R 7353545 intron Dscam1 - chr2R_13_7350001 chr2R_7350001 RAL-907 629 chr2R 7417911 7418166 chr2R 7418017 7418258 22 99 4.0 13.0 8.5 2.3 347 chr2R 7417911 intergenic not near genes chr2R 7418084 intergenic not near genes chr2R 7418258 intergenic not near genes chr2R_22_7415001 chr2R_7415001 RAL-907 630 chr2R 7420418 7420424 chr2R 7420543 7420559 4 132 0.0 13.5 6.8 0.5 141 chr2R 7420418 intron so + chr2R 7420488 intron so + chr2R 7420559 intron so + chr2R_4_7420001 chr2R_7420001 RAL-907 631 chr2R 7434877 7434910 chr2R 7439198 7439231 Juan 15 4321 5.5 8.0 6.8 1.9 4354 chr2R 7434877 intergenic so + chr2R 7437054 intergenic not near genes chr2R 7439231 intergenic not near genes chr2R_15_7435001 chr2R_7435001 RAL-907 632 chr2R 7551665 7551687 chr2R 7551776 7551793 6 107 7.0 5.5 6.2 0.8 128 chr2R 7551665 intron Corin + chr2R 7551729 intron Corin + chr2R 7551793 intron Corin + chr2R_6_7550001 chr2R_7550001 RAL-907 633 chr2R 7551689 7551706 chr2R 7551775 7551799 7 103 4.0 5.5 4.8 1.2 110 chr2R 7551689 intron Corin + chr2R 7551744 intron Corin + chr2R 7551799 intron Corin + chr2R_7_7550001 chr2R_7550001 RAL-907 634 chr2R 7608396 7608444 chr2R 7613611 7613666 I-element 5 5221 3.5 0.0 1.8 1.8 5270 chr2R 7608396 intron CG1358 - chr2R 7611031 intron CG1358 - chr2R 7613666 intron CG1358 - chr2R_5_7610001 chr2R_7610001 RAL-907 635 chr2R 7815651 7815701 chr2R 7822140 7822190 Burdock 16 6488 5.0 7.0 6.0 2.3 6539 chr2R 7815651 intergenic CG1882 + chr2R 7818920 intergenic not near genes chr2R 7822190 3` UTR cathD - chr2R_16_7815001 chr2R_7815001 RAL-907 636 chr2R 7862213 7862250 chr2R 7867345 7867381 flea 9 5131 1.0 2.5 1.8 3.2 5168 chr2R 7862213 intron Dgk - chr2R 7864797 intron Dgk - chr2R 7867381 intron Dgk - chr2R_9_7860001 chr2R_7860001 RAL-907 637 chr2R 7869196 7869212 chr2R 7873975 7874018 Doc 4 4798 3.0 2.0 2.5 1.1 4822 chr2R 7869196 intron Dgk - chr2R 7871607 intron Dgk - chr2R 7874018 intron Dgk - chr2R_4_7870001 chr2R_7870001 RAL-907 638 chr2R 7892152 7892180 chr2R 7892377 7892424 5 232 3.0 4.5 3.8 1.0 272 chr2R 7892152 intron CG30377 + chr2R 7892288 intron CG30377 + chr2R 7892424 intron CG30377 + chr2R_5_7890001 chr2R_7890001 RAL-907 639 chr2R 7916407 7916456 chr2R 7916512 7916561 8 98 3.0 5.0 4.0 1.6 154 chr2R 7916407 5` UTR CG12159 - chr2R 7916484 intergenic CG12159 -,Cul1 + chr2R 7916561 intergenic CG12159 -,Cul1 + chr2R_8_7915001 chr2R_7915001 RAL-907 640 chr2R 7926908 7926939 chr2R 7927004 7927035 11 95 4.0 4.5 4.2 2.1 127 chr2R 7926908 intron CG8791 + chr2R 7926972 intron CG8791 + chr2R 7927035 intron CG8791 + chr2R_11_7925001 chr2R_7925001 RAL-907 641 chr2R 8067054 8067090 chr2R 8067158 8067193 10 104 3.5 2.5 3.0 2.5 139 chr2R 8067054 intron CG17977 - chr2R 8067124 intron CG17977 - chr2R 8067193 exon CG17977 - chr2R_10_8065001 chr2R_8065001 RAL-907 642 chr2R 8076663 8076700 chr2R 8076757 8076800 12 99 5.0 1.5 3.2 2.9 137 chr2R 8076663 intron lig + chr2R 8076732 intron lig + chr2R 8076800 intron lig + chr2R_12_8075001 chr2R_8075001 RAL-907 643 chr2R 8089242 8089285 chr2R 8089348 8089391 16 106 4.5 4.5 4.5 2.9 149 chr2R 8089242 3` UTR sut2 + chr2R 8089316 intergenic sut2 +,sut3 + chr2R 8089391 intergenic sut3 +,sut2 + chr2R_16_8085001 chr2R_8085001 RAL-907 644 chr2R 8236015 8236057 chr2R 8236113 8236156 17 100 5.5 1.0 3.2 4.0 141 chr2R 8236015 intergenic not near genes chr2R 8236086 intergenic not near genes chr2R 8236156 intergenic not near genes chr2R_17_8235001 chr2R_8235001 RAL-907 645 chr2R 8330852 8330888 chr2R 8331358 8331394 roo 13 504 2.0 8.5 5.2 2.1 542 chr2R 8330852 intron pdm3 + chr2R 8331123 intron pdm3 + chr2R 8331394 intron pdm3 + chr2R_13_8330001 chr2R_8330001 RAL-907 646 chr2R 8406464 8406506 chr2R 8406566 8406577 4 93 1.5 2.0 1.8 1.4 113 chr2R 8406464 intron CG2121 - chr2R 8406520 intron CG2121 - chr2R 8406577 intron CG2121 - chr2R_4_8405001 chr2R_8405001 RAL-907 647 chr2R 8489717 8489740 chr2R 8489815 8489839 5 99 6.0 5.0 5.5 0.8 122 chr2R 8489717 intron mtt - chr2R 8489778 intron mtt - chr2R 8489839 intron mtt - chr2R_5_8485001 chr2R_8485001 RAL-907 648 chr2R 8489742 8489745 chr2R 8489811 8489844 5 93 5.5 4.5 5.0 0.8 102 chr2R 8489742 intron mtt - chr2R 8489793 intron mtt - chr2R 8489844 intron mtt - chr2R_5_8485001 chr2R_8485001 RAL-907 649 chr2R 8489746 8489759 chr2R 8489807 8489858 4 90 3.0 4.0 3.5 0.9 112 chr2R 8489746 intron mtt - chr2R 8489802 intron mtt - chr2R 8489858 intron mtt - chr2R_4_8485001 chr2R_8485001 RAL-907 650 chr2R 8612559 8612610 chr2R 8612656 8612707 21 96 4.5 5.0 4.8 3.6 148 chr2R 8612559 intron CG8642 - chr2R 8612633 intron CG8642 - chr2R 8612707 intron CG8642 - chr2R_21_8610001 chr2R_8610001 RAL-907 651 chr2R 8696775 8696823 chr2R 8696878 8696886 4 83 1.0 0.5 0.8 2.2 111 chr2R 8696775 exon CG8738 + chr2R 8696830 exon CG8738 + chr2R 8696886 exon CG8738 + chr2R_4_8695001 chr2R_8695001 RAL-907 652 chr2R 8722763 8722793 chr2R 8723007 8723032 pogo 7 255 3.5 4.0 3.8 1.5 269 chr2R 8722763 intron CG14767 - chr2R 8722898 intron CG14767 - chr2R 8723032 intron CG14767 - chr2R_7_8720001 chr2R_8720001 RAL-907 653 chr2R 8777927 8777934 chr2R 8784151 8784158 diver 5 6224 4.0 9.0 6.5 0.7 6231 chr2R 8777927 intergenic not near genes chr2R 8781042 intergenic not near genes chr2R 8784158 intergenic not near genes chr2R_5_8780001 chr2R_8780001 RAL-907 654 chr2R 8833411 8833415 chr2R 8833513 8833517 4 102 10.5 2.5 6.5 0.5 106 chr2R 8833411 intron sns + chr2R 8833464 intron sns + chr2R 8833517 intron sns + chr2R_4_8830001 chr2R_8830001 RAL-907 655 chr2R 8833419 8833443 chr2R 8833509 8833545 6 99 7.0 2.5 4.8 1.0 126 chr2R 8833419 intron sns + chr2R 8833482 intron sns + chr2R 8833545 intron sns + chr2R_6_8830001 chr2R_8830001 RAL-907 656 chr2R 8862233 8862282 chr2R 8862682 8862735 9 453 4.5 12.5 8.5 0.9 502 chr2R 8862233 intron RyR + chr2R 8862484 intron RyR + chr2R 8862735 intron RyR + chr2R_9_8860001 chr2R_8860001 RAL-907 657 chr2R 8862313 8862353 chr2R 8862762 8862786 6 437 9.0 20.5 14.8 0.4 473 chr2R 8862313 intron RyR + chr2R 8862550 intron RyR + chr2R 8862786 intron RyR + chr2R_6_8860001 chr2R_8860001 RAL-907 658 chr2R 8967414 8967705 chr2R 8967581 8967842 16 159 3.5 4.0 3.8 3.3 428 chr2R 8967414 intron CG8216 - chr2R 8967628 intron CG8216 - chr2R 8967842 intron CG8216 - chr2R_16_8965001 chr2R_8965001 RAL-907 659 chr2R 9151281 9151320 chr2R 9157771 9157810 Burdock 12 6489 4.0 5.0 4.5 2.2 6529 chr2R 9151281 exon CG30345 + chr2R 9154546 intergenic not near genes chr2R 9157810 intergenic CG8008 - chr2R_12_9150001 chr2R_9150001 RAL-907 660 chr2R 9161956 9161997 chr2R 9162061 9162102 16 104 4.0 4.0 4.0 3.2 146 chr2R 9161956 5` UTR CR44283 + chr2R 9162029 intergenic CG8046 -,CR44283 + chr2R 9162102 3` UTR CG8046 - chr2R_16_9160001 chr2R_9160001 RAL-907 661 chr2R 9183114 9183162 chr2R 9183214 9183264 6 102 2.5 2.5 2.5 1.7 150 chr2R 9183114 intron ltd - chr2R 9183189 intron ltd - chr2R 9183264 intron ltd - chr2R_6_9180001 chr2R_9180001 RAL-907 662 chr2R 9192329 9192356 chr2R 9192438 9192470 12 113 4.5 4.5 4.5 2.2 141 chr2R 9192329 intergenic CG45085 -,CG8026 - chr2R 9192400 intergenic CG45085 -,CG8026 - chr2R 9192470 intergenic CG45085 -,CG8026 - chr2R_12_9190001 chr2R_9190001 RAL-907 663 chr2R 9206084 9206100 chr2R 9206186 9206203 6 100 4.5 2.0 3.2 1.4 119 chr2R 9206084 exon CG8027 - chr2R 9206144 exon CG8027 - chr2R 9206203 exon CG8027 - chr2R_6_9205001 chr2R_9205001 RAL-907 664 chr2R 9206105 9206130 chr2R 9206182 9206232 5 94 1.5 2.0 1.8 1.8 127 chr2R 9206105 exon CG8027 - chr2R 9206168 exon CG8027 - chr2R 9206232 exon CG8027 - chr2R_5_9205001 chr2R_9205001 RAL-907 665 chr2R 9212677 9212724 chr2R 9213183 9213204 roo 14 494 3.0 2.0 2.5 4.0 527 chr2R 9212677 intergenic CR45309 + chr2R 9212940 intergenic CR45309 + chr2R 9213204 5` UTR CR45309 + chr2R_14_9210001 chr2R_9210001 RAL-907 666 chr2R 9227853 9227901 chr2R 9227955 9228007 21 105 3.5 6.0 4.8 3.6 154 chr2R 9227853 3` UTR hig - chr2R 9227930 3` UTR hig - chr2R 9228007 3` UTR hig - chr2R_21_9225001 chr2R_9225001 RAL-907 667 chr2R 9364373 9364397 chr2R 9364450 9364465 6 83 3.0 4.0 3.5 1.3 92 chr2R 9364373 intron CG13954 - chr2R 9364419 intron CG13954 - chr2R 9364465 intron CG13954 - chr2R_6_9360001 chr2R_9360001 RAL-907 668 chr2R 9368118 9368151 chr2R 9368202 9368207 11 83 0.5 0.0 0.2 9.2 89 chr2R 9368118 intron CG13954 - chr2R 9368162 intron CG13954 - chr2R 9368207 intron CG13954 - chr2R_11_9365001 chr2R_9365001 RAL-907 669 chr2R 9480056 9480105 chr2R 9490607 9490656 roo 14 10551 3.0 7.5 5.2 2.3 10600 chr2R 9480056 intergenic not near genes chr2R 9485356 intergenic not near genes chr2R 9490656 intergenic not near genes chr2R_14_9485001 chr2R_9485001 RAL-907 670 chr2R 9605814 9605856 chr2R 9605941 9605977 6 126 3.5 3.5 3.5 1.3 163 chr2R 9605814 3` UTR CR44285 - chr2R 9605896 intergenic CR44285 -,GstT1 +,CG1902 + chr2R 9605977 intergenic GstT1 +,CR44285 -,CG1902 + chr2R_6_9605001 chr2R_9605001 RAL-907 671 chr2R 9699405 9699435 chr2R 9699502 9699522 5 99 0.5 7.0 3.8 1.0 117 chr2R 9699405 intergenic not near genes chr2R 9699464 intergenic not near genes chr2R 9699522 intergenic not near genes chr2R_5_9695001 chr2R_9695001 RAL-907 672 chr2R 9726601 9726640 chr2R 9734172 9734211 17.6 23 7571 7.5 7.0 7.2 2.8 7610 chr2R 9726601 intron sqa - chr2R 9730406 intron sqa - chr2R 9734211 intron sqa - chr2R_23_9730001 chr2R_9730001 RAL-907 673 chr2R 9746549 9746597 chr2R 9747862 9747915 17 1322 31.5 19.5 25.5 0.6 1366 chr2R 9746549 5` UTR sqa - chr2R 9747232 5` UTR sqa - chr2R 9747915 5` UTR sqa - chr2R_17_9745001 chr2R_9745001 RAL-907 674 chr2R 9770075 9770088 chr2R 9770178 9770196 4 110 1.5 6.5 4.0 0.8 121 chr2R 9770075 intron CG1688 - chr2R 9770136 intron CG1688 - chr2R 9770196 intron CG1688 - chr2R_4_9770001 chr2R_9770001 RAL-907 675 chr2R 9871019 9871058 chr2R 9871525 9871553 roo 7 499 5.0 8.5 6.8 0.9 534 chr2R 9871019 intron cbx - chr2R 9871286 intron cbx - chr2R 9871553 intron,5` UTR cbx -,CG18446 + chr2R_7_9870001 chr2R_9870001 RAL-907 676 chr2R 9928399 9928451 chr2R 9928544 9928574 8 121 2.5 5.0 3.8 1.7 175 chr2R 9928399 intron Mef2 - chr2R 9928486 intron Mef2 - chr2R 9928574 intron Mef2 - chr2R_8_9925001 chr2R_9925001 RAL-907 677 chr2R 9950280 9950325 chr2R 9950377 9950387 8 90 4.0 4.0 4.0 1.6 107 chr2R 9950280 intron Mef2 - chr2R 9950334 intron Mef2 - chr2R 9950387 intron Mef2 - chr2R_8_9950001 chr2R_9950001 RAL-907 678 chr2R 9975907 9975929 chr2R 9976041 9976053 4 132 3.5 0.0 1.8 1.4 146 chr2R 9975907 intergenic not near genes chr2R 9975980 intergenic not near genes chr2R 9976053 intergenic not near genes chr2R_4_9975001 chr2R_9975001 RAL-907 679 chr2R 10017637 10017647 chr2R 10017736 10017743 4 98 5.5 1.0 3.2 1.0 106 chr2R 10017637 intron Pka-R2 - chr2R 10017690 intron Pka-R2 - chr2R 10017743 intron Pka-R2 - chr2R_4_10015001 chr2R_10015001 RAL-907 680 chr2R 10017650 10017670 chr2R 10017735 10017769 7 96 2.5 1.0 1.8 2.5 119 chr2R 10017650 intron Pka-R2 - chr2R 10017710 intron Pka-R2 - chr2R 10017769 intron Pka-R2 - chr2R_7_10015001 chr2R_10015001 RAL-907 681 chr2R 10047798 10047830 chr2R 10047901 10047933 12 103 5.0 3.0 4.0 2.4 135 chr2R 10047798 intron oys - chr2R 10047866 intron oys - chr2R 10047933 intron oys - chr2R_12_10045001 chr2R_10045001 RAL-907 682 chr2R 10053502 10053549 chr2R 10053625 10053672 13 122 3.0 6.0 4.5 2.4 170 chr2R 10053502 intron magu + chr2R 10053587 intron magu + chr2R 10053672 intron magu + chr2R_13_10050001 chr2R_10050001 RAL-907 683 chr2R 10086921 10086932 chr2R 10087018 10087049 9 102 0.5 4.5 2.5 2.6 128 chr2R 10086921 intron,exon CG2269 +,sut4 - chr2R 10086985 intron,5` UTR CG2269 +,sut4 - chr2R 10087049 intron,5` UTR CG2269 +,sut4 - chr2R_9_10085001 chr2R_10085001 RAL-907 684 chr2R 10122721 10122747 chr2R 10122950 10122971 8 229 4.0 4.0 4.0 1.6 250 chr2R 10122721 intergenic Ccs - chr2R 10122846 intergenic Ccs - chr2R 10122971 intergenic Ccs - chr2R_8_10120001 chr2R_10120001 RAL-907 685 chr2R 10130245 10130277 chr2R 10130330 10130381 4 95 2.0 0.5 1.2 1.8 136 chr2R 10130245 intron gem + chr2R 10130313 intron gem + chr2R 10130381 intron gem + chr2R_4_10130001 chr2R_10130001 RAL-907 686 chr2R 10171091 10171145 chr2R 10171195 10171249 14 104 1.5 3.0 2.2 4.4 158 chr2R 10171091 intron KCNQ - chr2R 10171170 intron KCNQ - chr2R 10171249 intron KCNQ - chr2R_14_10170001 chr2R_10170001 RAL-907 687 chr2R 10172616 10172665 chr2R 10172748 10172766 11 124 4.5 0.5 2.5 3.1 150 chr2R 10172616 intron KCNQ - chr2R 10172691 intron KCNQ - chr2R 10172766 intron KCNQ - chr2R_11_10170001 chr2R_10170001 RAL-907 688 chr2R 10176872 10176902 chr2R 10186059 10186089 roo 11 9187 10.0 9.5 9.8 1.0 9217 chr2R 10176872 intron KCNQ - chr2R 10181480 intron KCNQ - chr2R 10186089 intron KCNQ - chr2R_11_10180001 chr2R_10180001 RAL-907 689 chr2R 10216200 10216214 chr2R 10216289 10216305 5 93 6.0 4.0 5.0 0.8 105 chr2R 10216200 intron,intron CG12912 -,Hr46 - chr2R 10216252 intron,intron CG12912 -,Hr46 - chr2R 10216305 intron,intron CG12912 -,Hr46 - chr2R_5_10215001 chr2R_10215001 RAL-907 690 chr2R 10225711 10225748 chr2R 10225813 10225850 14 100 6.5 4.5 5.5 2.2 139 chr2R 10225711 intron,intron CG12912 -,Hr46 - chr2R 10225780 intron,intron CG12912 -,Hr46 - chr2R 10225850 intron,intron CG12912 -,Hr46 - chr2R_14_10225001 chr2R_10225001 RAL-907 691 chr2R 10257145 10257193 chr2R 10257250 10257304 16 110 3.0 3.0 3.0 4.0 159 chr2R 10257145 intron CG12911 + chr2R 10257224 intron CG12911 + chr2R 10257304 intron CG12911 + chr2R_16_10255001 chr2R_10255001 RAL-907 692 chr2R 10274803 10274808 chr2R 10274899 10274905 5 97 9.5 0.0 4.8 0.9 102 chr2R 10274803 intron CAP + chr2R 10274854 intron CAP + chr2R 10274905 intron CAP + chr2R_5_10270001 chr2R_10270001 RAL-907 693 chr2R 10303515 10303560 chr2R 10303635 10303669 15 115 2.0 4.5 3.2 3.6 154 chr2R 10303515 intron CAP + chr2R 10303592 intron CAP + chr2R 10303669 intron CAP + chr2R_15_10300001 chr2R_10300001 RAL-907 694 chr2R 10313301 10313353 chr2R 10313409 10313461 17 106 1.0 5.0 3.0 4.2 160 chr2R 10313301 intergenic not near genes chr2R 10313381 intergenic not near genes chr2R 10313461 intergenic Ndg + chr2R_17_10310001 chr2R_10310001 RAL-907 695 chr2R 10318494 10318538 chr2R 10318600 10318644 16 106 0.0 3.0 1.5 6.4 150 chr2R 10318494 intron Ndg + chr2R 10318569 intron Ndg + chr2R 10318644 intron Ndg + chr2R_16_10315001 chr2R_10315001 RAL-907 696 chr2R 10319707 10319737 chr2R 10319819 10319849 16 112 5.0 5.0 5.0 2.7 142 chr2R 10319707 intron Ndg + chr2R 10319778 intron Ndg + chr2R 10319849 intron,3` UTR Ndg +,CG34222 - chr2R_16_10315001 chr2R_10315001 RAL-907 697 chr2R 10391307 10391342 chr2R 10396495 10396532 4 5188 10.5 21.5 16.0 0.2 5225 chr2R 10391307 intron CG42732 - chr2R 10393920 intron CG42732 - chr2R 10396532 intron CG42732 - chr2R_4_10390001 chr2R_10390001 RAL-907 698 chr2R 10409041 10409084 chr2R 10409138 10409180 7 96 0.0 3.0 1.5 2.8 139 chr2R 10409041 intron CG42732 - chr2R 10409110 intron CG42732 - chr2R 10409180 intron,exon CG42732 -,CG33477 - chr2R_7_10405001 chr2R_10405001 RAL-907 699 chr2R 10411791 10411810 chr2R 10411893 10411912 5 102 4.0 5.5 4.8 0.9 121 chr2R 10411791 intron CG42732 - chr2R 10411852 intron CG42732 - chr2R 10411912 intron CG42732 - chr2R_5_10410001 chr2R_10410001 RAL-907 700 chr2R 10411814 10411835 chr2R 10411889 10411937 9 95 0.5 4.5 2.5 2.6 123 chr2R 10411814 intron CG42732 - chr2R 10411876 intron CG42732 - chr2R 10411937 intron CG42732 - chr2R_9_10410001 chr2R_10410001 RAL-907 701 chr2R 10429001 10429036 chr2R 10429097 10429097 7 83 3.5 2.0 2.8 1.8 96 chr2R 10429001 intergenic not near genes chr2R 10429049 intergenic not near genes chr2R 10429097 intergenic not near genes chr2R_7_10425001 chr2R_10425001 RAL-907 702 chr2R 10454105 10454123 chr2R 10454174 10454219 6 92 3.5 2.0 2.8 1.6 114 chr2R 10454105 intron,intron Galphao +,Cyp49a1 - chr2R 10454162 intron,intron Galphao +,Cyp49a1 - chr2R 10454219 intron,intron Galphao +,Cyp49a1 - chr2R_6_10450001 chr2R_10450001 RAL-907 703 chr2R 10562166 10562218 chr2R 10562274 10562326 21 106 0.5 6.0 3.2 5.0 160 chr2R 10562166 exon psq + chr2R 10562246 intron psq + chr2R 10562326 intron psq + chr2R_21_10560001 chr2R_10560001 RAL-907 704 chr2R 10574604 10574638 chr2R 10574706 10574740 6 102 3.0 3.0 3.0 1.5 136 chr2R 10574604 intron psq + chr2R 10574672 intron psq + chr2R 10574740 intron psq + chr2R_6_10570001 chr2R_10570001 RAL-907 705 chr2R 10644038 10644089 chr2R 10644136 10644187 19 97 5.0 0.5 2.8 5.0 149 chr2R 10644038 intron Git - chr2R 10644112 intron Git - chr2R 10644187 intron Git - chr2R_19_10640001 chr2R_10640001 RAL-907 706 chr2R 10658034 10658077 chr2R 10658146 10658189 12 110 3.0 3.0 3.0 3.0 155 chr2R 10658034 intergenic CR44452 - chr2R 10658112 intergenic not near genes chr2R 10658189 intergenic not near genes chr2R_12_10655001 chr2R_10655001 RAL-907 707 chr2R 10658911 10658927 chr2R 10659016 10659026 6 104 10.5 0.0 5.2 1.0 115 chr2R 10658911 intergenic not near genes chr2R 10658968 intergenic not near genes chr2R 10659026 intergenic not near genes chr2R_6_10655001 chr2R_10655001 RAL-907 708 chr2R 10743173 10743207 chr2R 10743261 10743305 4 88 1.0 2.0 1.5 1.6 132 chr2R 10743173 intron CG33144 - chr2R 10743239 intron CG33144 - chr2R 10743305 intron CG33144 - chr2R_4_10740001 chr2R_10740001 RAL-907 709 chr2R 10794891 10794941 chr2R 10794989 10795039 21 97 3.5 2.0 2.8 5.5 148 chr2R 10794891 intron CG33144 - chr2R 10794965 intron CG33144 - chr2R 10795039 intron CG33144 - chr2R_21_10790001 chr2R_10790001 RAL-907 710 chr2R 10848293 10848298 chr2R 10848428 10848433 4 135 4.5 6.5 5.5 0.6 140 chr2R 10848293 intron CG30015 - chr2R 10848363 intron CG30015 - chr2R 10848433 intron CG30015 - chr2R_4_10845001 chr2R_10845001 RAL-907 711 chr2R 10853239 10853289 chr2R 10853364 10853399 11 111 1.0 3.0 2.0 3.7 160 chr2R 10853239 intron CG30015 - chr2R 10853319 intron CG30015 - chr2R 10853399 intron CG30015 - chr2R_11_10850001 chr2R_10850001 RAL-907 712 chr2R 10860487 10860517 chr2R 10860574 10860619 16 99 5.0 8.5 6.8 2.1 132 chr2R 10860487 intron CG30015 - chr2R 10860553 intron CG30015 - chr2R 10860619 intron CG30015 - chr2R_16_10860001 chr2R_10860001 RAL-907 713 chr2R 10897992 10898032 chr2R 10898078 10898128 10 95 5.0 1.5 3.2 2.4 136 chr2R 10897992 intergenic Rpb5 -,CG7712 - chr2R 10898060 3` UTR Rpb5 - chr2R 10898128 3` UTR Rpb5 - chr2R_10_10895001 chr2R_10895001 RAL-907 714 chr2R 10959084 10959106 chr2R 10959170 10959205 9 96 2.0 1.5 1.8 3.2 121 chr2R 10959084 intergenic not near genes chr2R 10959144 intergenic not near genes chr2R 10959205 intergenic not near genes chr2R_9_10955001 chr2R_10955001 RAL-907 715 chr2R 11009809 11009847 chr2R 11018988 11019033 roo 5 9186 2.0 2.0 2.0 1.7 9224 chr2R 11009809 intron luna - chr2R 11014421 intron luna - chr2R 11019033 intron luna - chr2R_5_11010001 chr2R_11010001 RAL-907 716 chr2R 11019880 11019908 chr2R 11024949 11024952 jockey 7 5066 2.5 5.0 3.8 1.5 5072 chr2R 11019880 intron luna - chr2R 11022416 intron luna - chr2R 11024952 intron luna - chr2R_7_11020001 chr2R_11020001 RAL-907 717 chr2R 11207801 11207823 chr2R 11208014 11208036 BS 5 213 8.0 10.0 9.0 0.5 235 chr2R 11207801 intron shn + chr2R 11207918 intron shn + chr2R 11208036 intron shn + chr2R_5_11205001 chr2R_11205001 RAL-907 718 chr2R 11207824 11207845 chr2R 11208006 11208052 BS 11 205 4.0 7.5 5.8 1.6 228 chr2R 11207824 intron shn + chr2R 11207938 intron shn + chr2R 11208052 intron shn + chr2R_11_11205001 chr2R_11205001 RAL-907 719 chr2R 11276783 11276817 chr2R 11276971 11277005 6 185 1.5 1.5 1.5 2.4 222 chr2R 11276783 intergenic not near genes chr2R 11276894 intergenic not near genes chr2R 11277005 intergenic not near genes chr2R_6_11275001 chr2R_11275001 RAL-907 720 chr2R 11344145 11344158 chr2R 11344259 11344274 6 116 0.0 9.0 4.5 1.1 129 chr2R 11344145 intergenic alphaTry - chr2R 11344210 intergenic alphaTry - chr2R 11344274 3` UTR alphaTry - chr2R_6_11340001 chr2R_11340001 RAL-907 721 chr2R 11368024 11368042 chr2R 11368120 11368138 5 96 3.5 3.0 3.2 1.2 114 chr2R 11368024 intron CG13204 + chr2R 11368081 intron CG13204 + chr2R 11368138 intron CG13204 + chr2R_5_11365001 chr2R_11365001 RAL-907 722 chr2R 11415530 11415545 chr2R 11418675 11418694 opus 4 3152 2.0 6.0 4.0 0.8 3164 chr2R 11415530 intron Drip - chr2R 11417112 intron Drip - chr2R 11418694 intron Drip - chr2R_4_11415001 chr2R_11415001 RAL-907 723 chr2R 11472628 11472670 chr2R 11473845 11473887 pogo 10 1216 3.5 3.0 3.2 2.4 1259 chr2R 11472628 intergenic not near genes chr2R 11473258 intergenic not near genes chr2R 11473887 intergenic not near genes chr2R_10_11470001 chr2R_11470001 RAL-907 724 chr2R 11485106 11485146 chr2R 11485208 11485248 7 98 1.0 7.5 4.2 1.3 142 chr2R 11485106 intron inv + chr2R 11485177 intron inv + chr2R 11485248 intron inv + chr2R_7_11485001 chr2R_11485001 RAL-907 725 chr2R 11497629 11497643 chr2R 11497728 11497731 5 94 4.5 6.0 5.2 0.8 102 chr2R 11497629 intron inv + chr2R 11497680 intron inv + chr2R 11497731 intron inv + chr2R_5_11495001 chr2R_11495001 RAL-907 726 chr2R 11555474 11555523 chr2R 11555610 11555659 20 136 0.0 8.0 4.0 4.0 185 chr2R 11555474 intergenic not near genes chr2R 11555566 intergenic not near genes chr2R 11555659 intergenic not near genes chr2R_20_11555001 chr2R_11555001 RAL-907 727 chr2R 11631379 11631412 chr2R 11631479 11631508 16 98 0.0 4.5 2.2 5.0 129 chr2R 11631379 intron CG9005 - chr2R 11631444 intron CG9005 - chr2R 11631508 intron CG9005 - chr2R_16_11630001 chr2R_11630001 RAL-907 728 chr2R 11677870 11677890 chr2R 11677949 11677956 5 87 4.5 3.5 4.0 1.0 86 chr2R 11677870 intron,exon Roc2 -,Tret1-2 + chr2R 11677913 intron,3` UTR Roc2 -,Tret1-2 + chr2R 11677956 intron,3` UTR Roc2 -,Tret1-2 + chr2R_5_11675001 chr2R_11675001 RAL-907 729 chr2R 11724145 11724189 chr2R 11724248 11724291 4 102 2.0 1.0 1.5 1.6 146 chr2R 11724145 intron pyr + chr2R 11724218 intron pyr + chr2R 11724291 intron pyr + chr2R_4_11720001 chr2R_11720001 RAL-907 730 chr2R 11826867 11826897 chr2R 11826997 11827029 10 132 10.0 4.5 7.2 1.2 162 chr2R 11826867 3` UTR CG13192 + chr2R 11826948 3` UTR CG13192 + chr2R 11827029 3` UTR CG13192 + chr2R_10_11825001 chr2R_11825001 RAL-907 731 chr2R 11863867 11863886 chr2R 11863974 11863993 5 107 4.5 11.0 7.8 0.6 126 chr2R 11863867 intergenic CG42531 + chr2R 11863930 intergenic CG42531 + chr2R 11863993 intergenic CG42531 + chr2R_5_11860001 chr2R_11860001 RAL-907 732 chr2R 11932544 11932588 chr2R 11932675 11932725 16 130 0.5 3.5 2.0 5.3 181 chr2R 11932544 intergenic not near genes chr2R 11932634 intergenic not near genes chr2R 11932725 intergenic not near genes chr2R_16_11930001 chr2R_11930001 RAL-907 733 chr2R 12044345 12044380 chr2R 12044450 12044479 8 104 4.5 3.5 4.0 1.6 134 chr2R 12044345 intergenic Drep-1 + chr2R 12044412 intergenic Drep-1 + chr2R 12044479 intergenic Drep-1 + chr2R_8_12040001 chr2R_12040001 RAL-907 734 chr2R 12124809 12124860 chr2R 12124912 12124944 11 99 3.0 4.0 3.5 2.4 135 chr2R 12124809 intergenic not near genes chr2R 12124876 intergenic not near genes chr2R 12124944 intergenic not near genes chr2R_11_12120001 chr2R_12120001 RAL-907 735 chr2R 12185980 12186037 chr2R 12186095 12186129 53 110 8.0 12.0 10.0 4.8 149 chr2R 12185980 intron Cyp6g1 + chr2R 12186054 intron Cyp6g1 + chr2R 12186129 intron Cyp6g1 + chr2R_53_12185001 chr2R_12185001 RAL-907 736 chr2R 12185222 12185237 chr2R 12188133 12188142 8 2909 31.5 145.0 88.2 0.1 2920 chr2R 12185222 3` UTR,exon CG13175 +,CG33964 + chr2R 12186682 exon Cyp6g1 + chr2R 12188142 3` UTR Cyp6g1 + chr2R_8_12185001 chr2R_12185001 RAL-907 737 chr2R 12187473 12187514 chr2R 12190069 12190110 17 2607 100.0 61.5 80.8 0.2 2637 chr2R 12187473 exon Cyp6g1 + chr2R 12188792 exon Cyp6g2 - chr2R 12190110 exon Cyp6g2 - chr2R_17_12185001 chr2R_12185001 RAL-907 738 chr2R 12187472 12187526 chr2R 12190111 12190122 9 2620 112.5 53.5 83.0 0.1 2650 chr2R 12187472 exon Cyp6g1 + chr2R 12188797 exon Cyp6g2 - chr2R 12190122 exon Cyp6g2 - chr2R_9_12185001 chr2R_12185001 RAL-907 739 chr2R 12217569 12217599 chr2R 12217662 12217700 7 89 1.0 3.5 2.2 2.2 131 chr2R 12217569 intergenic not near genes chr2R 12217634 intergenic not near genes chr2R 12217700 intergenic not near genes chr2R_7_12215001 chr2R_12215001 RAL-907 740 chr2R 12272302 12272350 chr2R 12272405 12272430 8 99 3.0 0.5 1.8 2.9 128 chr2R 12272302 intron Cam + chr2R 12272366 intron Cam + chr2R 12272430 intron Cam + chr2R_8_12270001 chr2R_12270001 RAL-907 741 chr2R 12363362 12363411 chr2R 12363814 12363847 12 450 4.0 4.0 4.0 2.4 485 chr2R 12363362 intergenic CG30043 + chr2R 12363604 intergenic CG30043 + chr2R 12363847 intergenic not near genes chr2R_12_12360001 chr2R_12360001 RAL-907 742 chr2R 12386136 12386186 chr2R 12386237 12386286 20 99 3.5 2.0 2.8 5.3 150 chr2R 12386136 intergenic not near genes chr2R 12386211 intergenic Cpr49Ac + chr2R 12386286 intergenic Cpr49Ac + chr2R_20_12385001 chr2R_12385001 RAL-907 743 chr2R 12484372 12484404 chr2R 12484476 12484508 10 104 5.0 2.5 3.8 2.1 136 chr2R 12484372 intron Dh44-R2 + chr2R 12484440 intron Dh44-R2 + chr2R 12484508 intron Dh44-R2 + chr2R_10_12480001 chr2R_12480001 RAL-907 744 chr2R 12535847 12535864 chr2R 12535931 12535965 5 92 3.0 4.0 3.5 1.1 118 chr2R 12535847 intron fra + chr2R 12535906 intron fra + chr2R 12535965 intron fra + chr2R_5_12535001 chr2R_12535001 RAL-907 745 chr2R 12565547 12565593 chr2R 12565944 12565962 6 376 0.0 3.5 1.8 2.1 415 chr2R 12565547 intergenic not near genes chr2R 12565754 intergenic Cyp301a1 + chr2R 12565962 intergenic Cyp301a1 + chr2R_6_12565001 chr2R_12565001 RAL-907 746 chr2R 12707497 12707547 chr2R 12715883 12715933 roo 19 8386 4.0 3.5 3.8 4.0 8436 chr2R 12707497 intron CG42663 + chr2R 12711715 intron CG42663 + chr2R 12715933 intron CG42663 + chr2R_19_12710001 chr2R_12710001 RAL-907 747 chr2R 12721765 12721813 chr2R 12721869 12721917 16 104 4.5 0.5 2.5 4.6 152 chr2R 12721765 intron CG42663 + chr2R 12721841 intron CG42663 + chr2R 12721917 intron CG42663 + chr2R_16_12720001 chr2R_12720001 RAL-907 748 chr2R 12819136 12819175 chr2R 12819280 12819315 4 141 0.0 0.0 0.0 4.0 179 chr2R 12819136 intergenic not near genes chr2R 12819226 intergenic not near genes chr2R 12819315 intergenic not near genes chr2R_4_12815001 chr2R_12815001 RAL-907 749 chr2R 12819435 12819472 chr2R 12824532 12824544 jockey 9 5093 2.5 4.0 3.2 2.1 5109 chr2R 12819435 intergenic not near genes chr2R 12821990 intergenic not near genes chr2R 12824544 intergenic not near genes chr2R_9_12820001 chr2R_12820001 RAL-907 750 chr2R 12836371 12836417 chr2R 12836478 12836524 6 106 3.5 4.0 3.8 1.2 153 chr2R 12836371 intergenic not near genes chr2R 12836448 intergenic not near genes chr2R 12836524 intergenic not near genes chr2R_6_12835001 chr2R_12835001 RAL-907 751 chr2R 12892318 12892364 chr2R 12892413 12892455 5 93 4.5 1.5 3.0 1.2 137 chr2R 12892318 intron vg + chr2R 12892386 intron vg + chr2R 12892455 intron vg + chr2R_5_12890001 chr2R_12890001 RAL-907 752 chr2R 12945293 12945325 chr2R 12945418 12945450 7 125 10.0 0.0 5.0 1.2 157 chr2R 12945293 intron Mdr49 - chr2R 12945372 intron Mdr49 - chr2R 12945450 intron Mdr49 - chr2R_7_12945001 chr2R_12945001 RAL-907 753 chr2R 13043034 13043063 chr2R 13043134 13043162 4 99 0.0 1.5 0.8 2.2 128 chr2R 13043034 intergenic not near genes chr2R 13043098 intergenic not near genes chr2R 13043162 intergenic not near genes chr2R_4_13040001 chr2R_13040001 RAL-907 754 chr2R 13089597 13089628 chr2R 13089868 13089896 7 268 3.5 3.5 3.5 1.6 299 chr2R 13089597 intergenic not near genes chr2R 13089746 intergenic not near genes chr2R 13089896 intergenic not near genes chr2R_7_13085001 chr2R_13085001 RAL-907 755 chr2R 13125689 13125706 chr2R 13125787 13125807 6 100 0.0 3.5 1.8 2.1 118 chr2R 13125689 exon CG13325 + chr2R 13125748 3` UTR CG13325 + chr2R 13125807 intergenic CG13325 + chr2R_6_13125001 chr2R_13125001 RAL-907 756 chr2R 13136822 13136852 chr2R 13141640 13141670 Doc 17 4817 3.5 2.0 2.8 4.5 4848 chr2R 13136822 exon Cap-G + chr2R 13139246 intron Cap-G + chr2R 13141670 intron Cap-G + chr2R_17_13135001 chr2R_13135001 RAL-907 757 chr2R 13172077 13172120 chr2R 13172175 13172218 4 96 3.5 5.0 4.2 0.8 141 chr2R 13172077 intron AGBE + chr2R 13172148 intron AGBE + chr2R 13172218 intron AGBE + chr2R_4_13170001 chr2R_13170001 RAL-907 758 chr2R 13213424 13213460 chr2R 13213521 13213529 4 93 0.0 0.0 0.0 4.0 105 chr2R 13213424 exon AQP - chr2R 13213476 intron AQP - chr2R 13213529 intron AQP - chr2R_4_13210001 chr2R_13210001 RAL-907 759 chr2R 13218284 13218312 chr2R 13218387 13218404 7 101 2.0 0.0 1.0 3.5 120 chr2R 13218284 intron CG4630 - chr2R 13218344 intron CG4630 - chr2R 13218404 intron CG4630 - chr2R_7_13215001 chr2R_13215001 RAL-907 760 chr2R 13309647 13309682 chr2R 13309785 13309820 12 136 3.5 5.5 4.5 2.2 173 chr2R 13309647 intergenic not near genes chr2R 13309734 intergenic not near genes chr2R 13309820 intergenic not near genes chr2R_12_13305001 chr2R_13305001 RAL-907 761 chr2R 13364705 13364733 chr2R 13364811 13364839 11 106 3.5 3.0 3.2 2.6 134 chr2R 13364705 intergenic not near genes chr2R 13364772 intergenic not near genes chr2R 13364839 intergenic not near genes chr2R_11_13360001 chr2R_13360001 RAL-907 762 chr2R 13431488 13431509 chr2R 13431572 13431607 7 96 3.0 3.5 3.2 1.7 119 chr2R 13431488 intron CG42321 - chr2R 13431548 intron CG42321 - chr2R 13431607 intron CG42321 - chr2R_7_13430001 chr2R_13430001 RAL-907 763 chr2R 13439090 13439140 chr2R 13439224 13439298 6 146 1.0 0.0 0.5 4.0 208 chr2R 13439090 intergenic CG42321 -,cnn - chr2R 13439194 intergenic cnn -,CG42321 - chr2R 13439298 intergenic cnn -,CG42321 - chr2R_6_13435001 chr2R_13435001 RAL-907 764 chr2R 13547086 13547105 chr2R 13547276 13547320 4 209 2.0 3.0 2.5 1.1 234 chr2R 13547086 intron CG6145 - chr2R 13547203 intron CG6145 - chr2R 13547320 intron CG6145 - chr2R_4_13545001 chr2R_13545001 RAL-907 765 chr2R 13554740 13554773 chr2R 13554840 13554878 7 103 0.0 5.0 2.5 2.0 138 chr2R 13554740 intron Roe1 + chr2R 13554809 intron Roe1 + chr2R 13554878 intron Roe1 + chr2R_7_13550001 chr2R_13550001 RAL-907 766 chr2R 13564878 13564931 chr2R 13565151 13565197 9 268 3.0 4.0 3.5 2.0 319 chr2R 13564878 intergenic not near genes chr2R 13565038 intergenic not near genes chr2R 13565197 intergenic not near genes chr2R_9_13565001 chr2R_13565001 RAL-907 767 chr2R 13580479 13580532 chr2R 13580849 13580882 jockey 9 361 1.0 2.5 1.8 3.2 403 chr2R 13580479 3` UTR CG6191 - chr2R 13580680 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580882 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_9_13580001 chr2R_13580001 RAL-907 768 chr2R 13631047 13631064 chr2R 13631168 13631186 4 121 9.0 3.0 6.0 0.6 139 chr2R 13631047 intron fas + chr2R 13631116 intron fas + chr2R 13631186 intron fas + chr2R_4_13630001 chr2R_13630001 RAL-907 769 chr2R 13694607 13694651 chr2R 13694704 13694738 9 94 1.0 0.5 0.8 5.0 131 chr2R 13694607 intron fas + chr2R 13694672 intron fas + chr2R 13694738 intron fas + chr2R_9_13690001 chr2R_13690001 RAL-907 770 chr2R 13709835 13709854 chr2R 13709947 13709967 10 112 3.0 0.0 1.5 4.0 132 chr2R 13709835 intron fas + chr2R 13709901 intron fas + chr2R 13709967 intron fas + chr2R_10_13705001 chr2R_13705001 RAL-907 771 chr2R 13768974 13769005 chr2R 13769089 13769101 6 108 2.0 3.0 2.5 1.7 127 chr2R 13768974 intergenic not near genes chr2R 13769038 intergenic not near genes chr2R 13769101 intergenic not near genes chr2R_6_13765001 chr2R_13765001 RAL-907 772 chr2R 13790306 13790327 chr2R 13790402 13790423 13 96 9.0 0.0 4.5 2.4 117 chr2R 13790306 intergenic not near genes chr2R 13790364 intergenic not near genes chr2R 13790423 intergenic not near genes chr2R_13_13790001 chr2R_13790001 RAL-907 773 chr2R 13817633 13817660 chr2R 13817741 13817788 6 130 0.5 0.0 0.2 5.0 155 chr2R 13817633 intron stj + chr2R 13817710 intron stj + chr2R 13817788 intron stj + chr2R_6_13815001 chr2R_13815001 RAL-907 774 chr2R 13888750 13888793 chr2R 13888839 13888908 7 95 3.5 0.0 1.8 2.5 158 chr2R 13888750 intron shot - chr2R 13888829 intron shot - chr2R 13888908 intron shot - chr2R_7_13885001 chr2R_13885001 RAL-907 775 chr2R 13925828 13925871 chr2R 13926024 13926067 11 194 1.5 3.5 2.5 3.1 239 chr2R 13925828 intron shot - chr2R 13925948 intron shot - chr2R 13926067 intron shot - chr2R_11_13925001 chr2R_13925001 RAL-907 776 chr2R 14014950 14014998 chr2R 14015764 14015799 12 813 2.5 2.5 2.5 3.4 849 chr2R 14014950 intron mam + chr2R 14015374 intron mam + chr2R 14015799 intron mam + chr2R_12_14015001 chr2R_14015001 RAL-907 777 chr2R 14018162 14018182 chr2R 14018243 14018286 9 100 7.0 5.5 6.2 1.2 124 chr2R 14018162 intron mam + chr2R 14018224 intron mam + chr2R 14018286 intron mam + chr2R_9_14015001 chr2R_14015001 RAL-907 778 chr2R 14037283 14037299 chr2R 14037386 14037402 5 103 0.5 10.5 5.5 0.8 119 chr2R 14037283 intron mam + chr2R 14037342 intron mam + chr2R 14037402 intron mam + chr2R_5_14035001 chr2R_14035001 RAL-907 779 chr2R 14141935 14141946 chr2R 14142060 14142071 5 125 9.0 7.5 8.2 0.5 136 chr2R 14141935 intergenic not near genes chr2R 14142003 intergenic not near genes chr2R 14142071 intergenic not near genes chr2R_5_14140001 chr2R_14140001 RAL-907 780 chr2R 14168358 14168369 chr2R 14168467 14168478 4 109 7.5 4.5 6.0 0.6 120 chr2R 14168358 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168418 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168478 intergenic CG18327 +,CG18324 +,CR44368 - chr2R_4_14165001 chr2R_14165001 RAL-907 781 chr2R 14168379 14168392 chr2R 14168459 14168501 8 105 4.0 3.5 3.8 1.7 122 chr2R 14168379 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168440 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168501 intergenic CG18327 +,CG18324 +,CR44368 - chr2R_8_14165001 chr2R_14165001 RAL-907 782 chr2R 14266741 14266795 chr2R 14266837 14266872 7 85 6.5 4.0 5.2 1.1 131 chr2R 14266741 intron CG8547 - chr2R 14266806 intron CG8547 - chr2R 14266872 intron CG8547 - chr2R_7_14265001 chr2R_14265001 RAL-907 783 chr2R 14285027 14285050 chr2R 14285142 14285167 15 114 3.5 2.5 3.0 3.8 140 chr2R 14285027 intron Ih + chr2R 14285097 intron Ih + chr2R 14285167 intron Ih + chr2R_15_14285001 chr2R_14285001 RAL-907 784 chr2R 14352672 14352712 chr2R 14352786 14352813 5 110 3.0 6.0 4.5 0.9 141 chr2R 14352672 exon CG8613 + chr2R 14352742 intron CG8613 + chr2R 14352813 intron CG8613 + chr2R_5_14350001 chr2R_14350001 RAL-907 785 chr2R 14357548 14357571 chr2R 14357658 14357681 11 109 3.0 6.0 4.5 2.0 133 chr2R 14357548 intergenic CG8617 -,Arc1 - chr2R 14357614 intergenic Arc1 -,CG8617 - chr2R 14357681 intergenic Arc1 -,CG8617 - chr2R_11_14355001 chr2R_14355001 RAL-907 786 chr2R 14386417 14386444 chr2R 14386524 14386551 12 106 6.0 4.5 5.2 1.9 134 chr2R 14386417 intergenic not near genes chr2R 14386484 intergenic not near genes chr2R 14386551 intergenic not near genes chr2R_12_14385001 chr2R_14385001 RAL-907 787 chr2R 14386445 14386458 chr2R 14386519 14386565 4 99 3.5 4.5 4.0 0.8 120 chr2R 14386445 intergenic not near genes chr2R 14386505 intergenic not near genes chr2R 14386565 intergenic not near genes chr2R_4_14385001 chr2R_14385001 RAL-907 788 chr2R 14405537 14405560 chr2R 14405893 14405911 8 355 5.0 5.5 5.2 1.3 374 chr2R 14405537 intergenic not near genes chr2R 14405724 intergenic not near genes chr2R 14405911 intergenic not near genes chr2R_8_14405001 chr2R_14405001 RAL-907 789 chr2R 14467286 14467326 chr2R 14476458 14476498 roo 10 9165 1.0 6.0 3.5 2.2 9212 chr2R 14467286 intergenic not near genes chr2R 14471892 intergenic not near genes chr2R 14476498 5` UTR CR44462 + chr2R_10_14470001 chr2R_14470001 RAL-907 790 chr2R 14541210 14541256 chr2R 14541487 14541522 7 270 3.0 3.0 3.0 1.8 312 chr2R 14541210 intron ttv + chr2R 14541366 intron ttv + chr2R 14541522 intron ttv + chr2R_7_14540001 chr2R_14540001 RAL-907 791 chr2R 14565541 14565586 chr2R 14565638 14565683 12 96 5.5 3.0 4.2 2.3 142 chr2R 14565541 intron ttv + chr2R 14565612 intron ttv + chr2R 14565683 intron ttv + chr2R_12_14565001 chr2R_14565001 RAL-907 792 chr2R 14566428 14566478 chr2R 14566535 14566580 12 106 4.5 1.0 2.8 3.2 152 chr2R 14566428 intron ttv + chr2R 14566504 intron ttv + chr2R 14566580 intron ttv + chr2R_12_14565001 chr2R_14565001 RAL-907 793 chr2R 14786014 14786063 chr2R 14786127 14786176 11 111 0.0 3.5 1.8 3.9 162 chr2R 14786014 intron kn - chr2R 14786095 intron kn - chr2R 14786176 intron kn - chr2R_11_14785001 chr2R_14785001 RAL-907 794 chr2R 14820882 14820933 chr2R 14820988 14821040 10 104 1.0 4.0 2.5 2.9 158 chr2R 14820882 intergenic not near genes chr2R 14820961 intergenic not near genes chr2R 14821040 intergenic not near genes chr2R_10_14820001 chr2R_14820001 RAL-907 795 chr2R 14911680 14911728 chr2R 14911823 14911871 11 143 2.5 3.5 3.0 2.8 191 chr2R 14911680 intron CG10249 - chr2R 14911776 intron CG10249 - chr2R 14911871 intron CG10249 - chr2R_11_14910001 chr2R_14910001 RAL-907 796 chr2R 14922124 14922170 chr2R 14922219 14922246 13 88 1.5 2.0 1.8 4.6 122 chr2R 14922124 intron CG10249 - chr2R 14922185 intron CG10249 - chr2R 14922246 intron CG10249 - chr2R_13_14920001 chr2R_14920001 RAL-907 797 chr2R 14930838 14930859 chr2R 14930951 14930967 5 111 0.0 0.0 0.0 5.0 129 chr2R 14930838 intron CG10253 - chr2R 14930902 intron CG10253 - chr2R 14930967 intron CG10253 - chr2R_5_14930001 chr2R_14930001 RAL-907 798 chr2R 14954754 14954782 chr2R 14954850 14954878 13 96 0.5 4.5 2.5 3.7 124 chr2R 14954754 intron aPKC - chr2R 14954816 intron aPKC - chr2R 14954878 intron aPKC - chr2R_13_14950001 chr2R_14950001 RAL-907 799 chr2R 14968065 14968085 chr2R 14968163 14968183 12 98 0.0 0.5 0.2 10.0 118 chr2R 14968065 intron ckn + chr2R 14968124 intron ckn + chr2R 14968183 intron ckn + chr2R_12_14965001 chr2R_14965001 RAL-907 800 chr2R 14979746 14979791 chr2R 14979842 14979887 14 93 5.5 5.0 5.2 2.3 141 chr2R 14979746 3` UTR ckn + chr2R 14979816 3` UTR ckn + chr2R 14979887 3` UTR ckn + chr2R_14_14975001 chr2R_14975001 RAL-907 801 chr2R 15015456 15015486 chr2R 15022891 15022930 mdg1 15 7441 3.0 7.0 5.0 2.5 7474 chr2R 15015456 intron hbs + chr2R 15019193 intron hbs + chr2R 15022930 intron hbs + chr2R_15_15015001 chr2R_15015001 RAL-907 802 chr2R 15119299 15119317 chr2R 15127800 15127802 Tirant 4 8494 11.5 2.5 7.0 0.5 8503 chr2R 15119299 intron chn + chr2R 15123550 intron chn + chr2R 15127802 intron chn + chr2R_4_15120001 chr2R_15120001 RAL-907 803 chr2R 15119328 15119350 chr2R 15127798 15127836 Tirant 6 8484 6.0 2.5 4.2 1.2 8508 chr2R 15119328 intron chn + chr2R 15123582 intron chn + chr2R 15127836 intron chn + chr2R_6_15120001 chr2R_15120001 RAL-907 804 chr2R 15137949 15137966 chr2R 15138049 15138066 4 98 5.5 0.5 3.0 1.0 117 chr2R 15137949 intron chn + chr2R 15138008 intron chn + chr2R 15138066 intron chn + chr2R_4_15135001 chr2R_15135001 RAL-907 805 chr2R 15137970 15137986 chr2R 15138047 15138088 5 91 5.0 0.5 2.8 1.3 118 chr2R 15137970 intron chn + chr2R 15138029 intron chn + chr2R 15138088 intron chn + chr2R_5_15135001 chr2R_15135001 RAL-907 806 chr2R 15235046 15235093 chr2R 15235180 15235227 10 133 2.5 5.5 4.0 2.0 181 chr2R 15235046 intron Fs - chr2R 15235136 intron Fs - chr2R 15235227 intron Fs - chr2R_10_15235001 chr2R_15235001 RAL-907 807 chr2R 15294671 15294709 chr2R 15294773 15294782 7 92 7.0 7.5 7.2 0.9 111 chr2R 15294671 intron,3` UTR Trpm -,CR44241 - chr2R 15294726 intron,3` UTR Trpm -,CR44241 - chr2R 15294782 intron,3` UTR Trpm -,CR44241 - chr2R_7_15290001 chr2R_15290001 RAL-907 808 chr2R 15296140 15296168 chr2R 15296242 15296271 5 103 1.0 2.5 1.8 1.8 131 chr2R 15296140 intron Trpm - chr2R 15296206 intron Trpm - chr2R 15296271 intron Trpm - chr2R_5_15295001 chr2R_15295001 RAL-907 809 chr2R 15373826 15373848 chr2R 15374005 15374027 7 179 6.0 3.5 4.8 1.2 201 chr2R 15373826 intergenic not near genes chr2R 15373926 intergenic not near genes chr2R 15374027 intergenic not near genes chr2R_7_15370001 chr2R_15370001 RAL-907 810 chr2R 15373866 15373877 chr2R 15374003 15374028 4 160 3.5 3.5 3.5 0.9 162 chr2R 15373866 intergenic not near genes chr2R 15373947 intergenic not near genes chr2R 15374028 intergenic not near genes chr2R_4_15370001 chr2R_15370001 RAL-907 811 chr2R 15374789 15374793 chr2R 15374892 15374896 5 103 0.0 2.5 1.2 2.3 107 chr2R 15374789 intergenic not near genes chr2R 15374842 intergenic not near genes chr2R 15374896 intergenic not near genes chr2R_5_15370001 chr2R_15370001 RAL-907 812 chr2R 15472023 15472062 chr2R 15472127 15472166 10 104 0.0 1.5 0.8 5.6 143 chr2R 15472023 intergenic CG43729 +,CG8180 - chr2R 15472094 intergenic CG8180 -,CG43729 + chr2R 15472166 intergenic CG8180 -,CG43729 + chr2R_10_15470001 chr2R_15470001 RAL-907 813 chr2R 15828137 15828154 chr2R 15828316 15828334 4 180 0.0 2.5 1.2 1.8 197 chr2R 15828137 intron,intron tun +,Poxn - chr2R 15828236 intron,intron tun +,Poxn - chr2R 15828334 intron,intron tun +,Poxn - chr2R_4_15825001 chr2R_15825001 RAL-907 814 chr2R 15891797 15891836 chr2R 15891893 15891932 10 96 1.5 2.5 2.0 3.3 135 chr2R 15891797 intron sli - chr2R 15891864 intron sli - chr2R 15891932 intron sli - chr2R_10_15890001 chr2R_15890001 RAL-907 815 chr2R 16279355 16279405 chr2R 16279460 16279510 11 101 0.0 1.0 0.5 7.3 155 chr2R 16279355 intergenic not near genes chr2R 16279432 intergenic not near genes chr2R 16279510 intergenic not near genes chr2R_11_16275001 chr2R_16275001 RAL-907 816 chr2R 16352846 16352868 chr2R 16352949 16352971 11 103 3.5 4.5 4.0 2.2 125 chr2R 16352846 intergenic not near genes chr2R 16352908 intergenic not near genes chr2R 16352971 intergenic not near genes chr2R_11_16350001 chr2R_16350001 RAL-907 817 chr2R 16380116 16380138 chr2R 16380218 16380256 6 112 5.5 2.5 4.0 1.2 140 chr2R 16380116 5` UTR,3` UTR CR45316 +,CR45317 - chr2R 16380186 3` UTR CR45317 - chr2R 16380256 intergenic CR45317 -,CR45316 +,CG43187 + chr2R_6_16380001 chr2R_16380001 RAL-907 818 chr2R 16406706 16406749 chr2R 16406804 16406847 18 97 5.0 2.5 3.8 3.8 141 chr2R 16406706 intron Sema-2b + chr2R 16406776 intron Sema-2b + chr2R 16406847 intron Sema-2b + chr2R_18_16405001 chr2R_16405001 RAL-907 819 chr2R 16518026 16518074 chr2R 16518122 16518130 7 90 4.5 4.5 4.5 1.3 104 chr2R 16518026 intron Sema-2a + chr2R 16518078 intron Sema-2a + chr2R 16518130 intron Sema-2a + chr2R_7_16515001 chr2R_16515001 RAL-907 820 chr2R 16539622 16539637 chr2R 16544851 16544866 copia 6 5229 13.0 8.0 10.5 0.5 5244 chr2R 16539622 intergenic not near genes chr2R 16542244 intergenic not near genes chr2R 16544866 intergenic not near genes chr2R_6_16540001 chr2R_16540001 RAL-907 821 chr2R 16539640 16539670 chr2R 16544845 16544899 copia 18 5227 4.0 6.5 5.2 2.9 5259 chr2R 16539640 intergenic not near genes chr2R 16542270 intergenic not near genes chr2R 16544899 intergenic not near genes chr2R_18_16540001 chr2R_16540001 RAL-907 822 chr2R 16617059 16617083 chr2R 16617146 16617182 10 96 3.0 4.5 3.8 2.1 123 chr2R 16617059 intron CG5065 + chr2R 16617120 intron CG5065 + chr2R 16617182 intron CG5065 + chr2R_10_16615001 chr2R_16615001 RAL-907 823 chr2R 16636881 16636919 chr2R 16637032 16637070 13 150 10.5 2.5 6.5 1.7 189 chr2R 16636881 intron Alk - chr2R 16636976 intron Alk - chr2R 16637070 intron Alk - chr2R_13_16635001 chr2R_16635001 RAL-907 824 chr2R 16701982 16702014 chr2R 16702089 16702096 4 95 4.5 1.0 2.8 1.1 114 chr2R 16701982 intron CG30463 - chr2R 16702039 intron CG30463 - chr2R 16702096 intron CG30463 - chr2R_4_16700001 chr2R_16700001 RAL-907 825 chr2R 16732623 16732651 chr2R 16732730 16732738 8 102 1.0 3.0 2.0 2.7 115 chr2R 16732623 5` UTR CG30463 - chr2R 16732680 5` UTR CG30463 - chr2R 16732738 5` UTR CG30463 - chr2R_8_16730001 chr2R_16730001 RAL-907 826 chr2R 16775639 16775675 chr2R 16775926 16775962 13 287 3.0 6.5 4.8 2.2 323 chr2R 16775639 3` UTR Arp53D + chr2R 16775800 intergenic Arp53D + chr2R 16775962 intergenic Arp53D + chr2R_13_16775001 chr2R_16775001 RAL-907 827 chr2R 16847042 16847078 chr2R 16847192 16847228 14 150 1.5 3.0 2.2 4.4 186 chr2R 16847042 intergenic not near genes chr2R 16847135 intergenic not near genes chr2R 16847228 intergenic not near genes chr2R_14_16845001 chr2R_16845001 RAL-907 828 chr2R 16921288 16921322 chr2R 16921385 16921419 9 93 4.5 9.0 6.8 1.2 131 chr2R 16921288 intergenic not near genes chr2R 16921354 intergenic not near genes chr2R 16921419 intergenic not near genes chr2R_9_16920001 chr2R_16920001 RAL-907 829 chr2R 16930610 16930616 chr2R 16930708 16930714 6 97 0.0 8.5 4.2 1.2 104 chr2R 16930610 intron Pkc53E + chr2R 16930662 intron Pkc53E + chr2R 16930714 intron Pkc53E + chr2R_6_16930001 chr2R_16930001 RAL-907 830 chr2R 16993514 16993556 chr2R 16993614 16993653 18 104 2.5 4.5 3.5 4.0 139 chr2R 16993514 intron Cbp53E + chr2R 16993584 intron Cbp53E + chr2R 16993653 intron Cbp53E + chr2R_18_16990001 chr2R_16990001 RAL-907 831 chr2R 17132836 17132866 chr2R 17132956 17132971 5 117 3.0 2.5 2.8 1.3 135 chr2R 17132836 intergenic not near genes chr2R 17132904 intergenic not near genes chr2R 17132971 intergenic Acp54A1 + chr2R_5_17130001 chr2R_17130001 RAL-907 832 chr2R 17147231 17147261 chr2R 17152282 17152312 jockey 10 5050 4.0 5.5 4.8 1.7 5081 chr2R 17147231 intergenic not near genes chr2R 17149772 intergenic not near genes chr2R 17152312 intergenic not near genes chr2R_10_17145001 chr2R_17145001 RAL-907 833 chr2R 17161338 17161352 chr2R 17161564 17161579 4 226 5.5 0.0 2.8 1.1 241 chr2R 17161338 intergenic not near genes chr2R 17161458 intergenic not near genes chr2R 17161579 intergenic not near genes chr2R_4_17160001 chr2R_17160001 RAL-907 834 chr2R 17176366 17176386 chr2R 17182562 17182596 diver 7 6206 0.5 10.0 5.2 1.1 6230 chr2R 17176366 intergenic not near genes chr2R 17179481 intergenic not near genes chr2R 17182596 intergenic not near genes chr2R_7_17175001 chr2R_17175001 RAL-907 835 chr2R 17236498 17236541 chr2R 17241722 17241735 copia 10 5220 2.0 4.0 3.0 2.5 5237 chr2R 17236498 intron mbl + chr2R 17239116 intron mbl + chr2R 17241735 intron mbl + chr2R_10_17235001 chr2R_17235001 RAL-907 836 chr2R 17389277 17389296 chr2R 17389377 17389380 4 100 5.0 3.0 4.0 0.8 103 chr2R 17389277 intergenic CR44344 - chr2R 17389328 intergenic CR44344 - chr2R 17389380 intergenic CR44344 - chr2R_4_17385001 chr2R_17385001 RAL-907 837 chr2R 17395278 17395318 chr2R 17395366 17395404 7 93 5.0 5.5 5.2 1.1 126 chr2R 17395278 intron Sip1 + chr2R 17395341 intron Sip1 + chr2R 17395404 intron Sip1 + chr2R_7_17395001 chr2R_17395001 RAL-907 838 chr2R 17404737 17404762 chr2R 17404842 17404867 9 104 4.5 5.0 4.8 1.6 130 chr2R 17404737 exon Sip1 + chr2R 17404802 3` UTR Sip1 + chr2R 17404867 3` UTR Sip1 + chr2R_9_17400001 chr2R_17400001 RAL-907 839 chr2R 17412342 17412392 chr2R 17412471 17412521 21 128 4.0 5.5 4.8 3.6 179 chr2R 17412342 intergenic Prosalpha5 + chr2R 17412432 intergenic Prosalpha5 + chr2R 17412521 intergenic Prosalpha5 + chr2R_21_17410001 chr2R_17410001 RAL-907 840 chr2R 17443775 17443803 chr2R 17443871 17443899 9 96 4.5 10.0 7.2 1.1 124 chr2R 17443775 intron EDTP - chr2R 17443837 intron EDTP - chr2R 17443899 intron EDTP - chr2R_9_17440001 chr2R_17440001 RAL-907 841 chr2R 17458985 17459035 chr2R 17459090 17459140 15 105 3.5 5.5 4.5 2.7 155 chr2R 17458985 intron CG14478 + chr2R 17459062 intron CG14478 + chr2R 17459140 intron CG14478 + chr2R_15_17455001 chr2R_17455001 RAL-907 842 chr2R 17470303 17470355 chr2R 17470403 17470455 22 99 4.5 3.5 4.0 4.4 152 chr2R 17470303 intron qkr54B + chr2R 17470379 intron qkr54B + chr2R 17470455 intron qkr54B + chr2R_22_17470001 chr2R_17470001 RAL-907 843 chr2R 17478813 17478865 chr2R 17478910 17478945 10 91 2.5 1.5 2.0 3.3 132 chr2R 17478813 3` UTR,intron CG43110 -,veil + chr2R 17478879 3` UTR,intron CG43110 -,veil + chr2R 17478945 3` UTR,intron CG43110 -,veil + chr2R_10_17475001 chr2R_17475001 RAL-907 844 chr2R 17485896 17485950 chr2R 17490686 17490738 F-element 12 4786 4.0 1.5 2.8 3.2 4842 chr2R 17485896 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488317 intron NT5E-2 + chr2R 17490738 intron NT5E-2 + chr2R_12_17485001 chr2R_17485001 RAL-907 845 chr2R 17640831 17640870 chr2R 17641398 17641411 6 560 1.5 0.5 1.0 3.0 580 chr2R 17640831 intergenic not near genes chr2R 17641121 intergenic not near genes chr2R 17641411 intergenic not near genes chr2R_6_17640001 chr2R_17640001 RAL-907 846 chr2R 17697156 17697184 chr2R 17697254 17697282 6 96 9.5 0.5 5.0 1.0 126 chr2R 17697156 intron rdgBbeta - chr2R 17697219 intron rdgBbeta - chr2R 17697282 intron rdgBbeta - chr2R_6_17695001 chr2R_17695001 RAL-907 847 chr2R 17709964 17710014 chr2R 17710073 17710119 10 108 4.5 5.5 5.0 1.7 155 chr2R 17709964 intron CG6424 - chr2R 17710042 intron CG6424 - chr2R 17710119 intron CG6424 - chr2R_10_17710001 chr2R_17710001 RAL-907 848 chr2R 17730632 17730673 chr2R 17730730 17730771 16 98 5.5 5.0 5.2 2.6 139 chr2R 17730632 intron,intron CG4975 +,CG4984 + chr2R 17730702 intron,intron CG4975 +,CG4984 + chr2R 17730771 intron,intron CG4975 +,CG4984 + chr2R_16_17730001 chr2R_17730001 RAL-907 849 chr2R 17782346 17782389 chr2R 17783569 17783612 pogo 20 1223 4.5 6.5 5.5 3.1 1266 chr2R 17782346 intergenic CG33981 -,fab1 - chr2R 17782979 intergenic not near genes chr2R 17783612 intergenic mir-31a - chr2R_20_17780001 chr2R_17780001 RAL-907 850 chr2R 17784020 17784055 chr2R 17784279 17784308 pogo 5 258 1.5 4.5 3.0 1.2 288 chr2R 17784020 intergenic mir-31a - chr2R 17784164 intergenic mir-31a - chr2R 17784308 intergenic mir-31a - chr2R_5_17780001 chr2R_17780001 RAL-907 851 chr2R 17886623 17886656 chr2R 17886725 17886751 9 101 5.5 2.0 3.8 1.9 128 chr2R 17886623 intron Elk + chr2R 17886687 intron Elk + chr2R 17886751 intron Elk + chr2R_9_17885001 chr2R_17885001 RAL-907 852 chr2R 17997056 17997086 chr2R 17997184 17997195 6 120 24.0 9.5 16.8 0.3 139 chr2R 17997056 intron dpr13 - chr2R 17997126 intron dpr13 - chr2R 17997195 intron dpr13 - chr2R_6_17995001 chr2R_17995001 RAL-907 853 chr2R 18045657 18045693 chr2R 18046029 18046065 jockey 6 370 1.5 5.0 3.2 1.4 408 chr2R 18045657 intergenic not near genes chr2R 18045861 intergenic not near genes chr2R 18046065 intergenic CG5767 - chr2R_6_18045001 chr2R_18045001 RAL-907 854 chr2R 18111665 18111713 chr2R 18115553 18115600 F-element 11 3887 2.0 6.0 4.0 2.2 3935 chr2R 18111665 intergenic not near genes chr2R 18113632 intergenic not near genes chr2R 18115600 intergenic not near genes chr2R_11_18110001 chr2R_18110001 RAL-907 855 chr2R 18124319 18124373 chr2R 18124416 18124432 20 93 2.5 4.0 3.2 4.8 113 chr2R 18124319 intron stau - chr2R 18124376 intron stau - chr2R 18124432 intron stau - chr2R_20_18120001 chr2R_18120001 RAL-907 856 chr2R 18197880 18197910 chr2R 18197997 18198027 11 117 4.0 1.5 2.8 2.9 147 chr2R 18197880 intergenic not near genes chr2R 18197954 intergenic not near genes chr2R 18198027 intergenic not near genes chr2R_11_18195001 chr2R_18195001 RAL-907 857 chr2R 18308270 18308289 chr2R 18308392 18308408 8 124 4.5 1.0 2.8 2.1 138 chr2R 18308270 intron sbb - chr2R 18308339 intron sbb - chr2R 18308408 intron sbb - chr2R_8_18305001 chr2R_18305001 RAL-907 858 chr2R 18308290 18308317 chr2R 18308389 18308443 10 123 2.0 1.0 1.5 4.0 153 chr2R 18308290 intron sbb - chr2R 18308366 intron sbb - chr2R 18308443 intron sbb - chr2R_10_18305001 chr2R_18305001 RAL-907 859 chr2R 18358376 18358416 chr2R 18372608 18372648 roo 12 14231 3.5 5.0 4.2 2.3 14272 chr2R 18358376 intergenic not near genes chr2R 18365512 intergenic not near genes chr2R 18372648 intergenic not near genes chr2R_12_18365001 chr2R_18365001 RAL-907 860 chr2R 18405731 18405788 chr2R 18405832 18405888 10 100 1.5 0.0 0.8 5.6 157 chr2R 18405731 intergenic GstE6 +,GstE5 + chr2R 18405810 intergenic GstE6 +,GstE5 + chr2R 18405888 intergenic GstE6 + chr2R_10_18405001 chr2R_18405001 RAL-907 861 chr2R 18408276 18408305 chr2R 18408406 18408435 8 135 3.0 3.5 3.2 1.9 159 chr2R 18408276 exon GstE8 + chr2R 18408356 exon GstE8 + chr2R 18408435 exon GstE8 + chr2R_8_18405001 chr2R_18405001 RAL-907 862 chr2R 18408978 18409026 chr2R 18409086 18409104 4 86 2.5 1.5 2.0 1.3 126 chr2R 18408978 intergenic GstE8 +,GstE9 + chr2R 18409041 intergenic GstE9 +,GstE8 + chr2R 18409104 exon GstE9 + chr2R_4_18405001 chr2R_18405001 RAL-907 863 chr2R 18463682 18463691 chr2R 18463803 18463812 4 121 2.5 5.5 4.0 0.8 130 chr2R 18463682 intron CG30116 - chr2R 18463747 intron CG30116 - chr2R 18463812 intron CG30116 - chr2R_4_18460001 chr2R_18460001 RAL-907 864 chr2R 18487820 18487853 chr2R 18495291 18495343 blood 4 7480 0.0 7.0 3.5 0.9 7523 chr2R 18487820 intron CG30116 - chr2R 18491582 intron CG30116 - chr2R 18495343 intron CG30116 - chr2R_4_18490001 chr2R_18490001 RAL-907 865 chr2R 18575806 18575828 chr2R 18581986 18582036 3S18 7 6195 0.0 5.5 2.8 1.8 6230 chr2R 18575806 intron GEFmeso - chr2R 18578921 intron GEFmeso - chr2R 18582036 intron GEFmeso - chr2R_7_18575001 chr2R_18575001 RAL-907 866 chr2R 18585798 18585803 chr2R 18585882 18585887 5 90 10.5 2.5 6.5 0.7 89 chr2R 18585798 intron GEFmeso - chr2R 18585842 intron GEFmeso - chr2R 18585887 intron GEFmeso - chr2R_5_18585001 chr2R_18585001 RAL-907 867 chr2R 18590846 18590899 chr2R 18600018 18600038 roo 8 9162 2.5 1.5 2.0 2.7 9192 chr2R 18590846 intron GEFmeso - chr2R 18595442 intron GEFmeso - chr2R 18600038 intron GEFmeso - chr2R_8_18595001 chr2R_18595001 RAL-907 868 chr2R 18601114 18601122 chr2R 18601211 18601217 5 96 6.0 3.5 4.8 0.9 103 chr2R 18601114 intron GEFmeso - chr2R 18601166 intron GEFmeso - chr2R 18601217 intron GEFmeso - chr2R_5_18600001 chr2R_18600001 RAL-907 869 chr2R 18601134 18601164 chr2R 18601209 18601261 10 87 3.5 3.5 3.5 2.2 127 chr2R 18601134 intron GEFmeso - chr2R 18601198 intron GEFmeso - chr2R 18601261 intron GEFmeso - chr2R_10_18600001 chr2R_18600001 RAL-907 870 chr2R 18646400 18646435 chr2R 18646565 18646600 9 163 2.5 5.0 3.8 1.9 200 chr2R 18646400 intron SP2637 - chr2R 18646500 intron SP2637 - chr2R 18646600 intron SP2637 - chr2R_9_18645001 chr2R_18645001 RAL-907 871 chr2R 18652336 18652353 chr2R 18652431 18652454 7 100 0.5 1.0 0.8 3.9 118 chr2R 18652336 intron SP2637 - chr2R 18652395 intron SP2637 - chr2R 18652454 intron SP2637 - chr2R_7_18650001 chr2R_18650001 RAL-907 872 chr2R 18675159 18675171 chr2R 18675257 18675269 6 97 0.0 10.0 5.0 1.0 110 chr2R 18675159 intergenic not near genes chr2R 18675214 intergenic not near genes chr2R 18675269 intergenic not near genes chr2R_6_18675001 chr2R_18675001 RAL-907 873 chr2R 18686905 18686938 chr2R 18687191 18687213 5 284 0.0 7.0 3.5 1.1 308 chr2R 18686905 intergenic CG44433 -,CG42855 + chr2R 18687059 intergenic CG44433 -,CG42855 + chr2R 18687213 intergenic CG42855 +,CG44433 - chr2R_5_18685001 chr2R_18685001 RAL-907 874 chr2R 18769636 18769733 chr2R 18769917 18769960 5 238 0.0 5.0 2.5 1.4 324 chr2R 18769636 intron Mctp + chr2R 18769798 intron Mctp + chr2R 18769960 intron Mctp + chr2R_5_18765001 chr2R_18765001 RAL-907 875 chr2R 18926487 18926529 chr2R 18926594 18926636 13 106 2.0 1.0 1.5 5.2 149 chr2R 18926487 intron sano + chr2R 18926562 intron sano + chr2R 18926636 intron sano + chr2R_13_18925001 chr2R_18925001 RAL-907 876 chr2R 18953154 18953191 chr2R 18953245 18953298 16 100 1.5 4.0 2.8 4.2 144 chr2R 18953154 intron sano + chr2R 18953226 intron sano + chr2R 18953298 intron sano + chr2R_16_18950001 chr2R_18950001 RAL-907 877 chr2R 18992001 18992045 chr2R 18992162 18992206 12 160 2.0 4.5 3.2 2.9 205 chr2R 18992001 intron tn + chr2R 18992104 intron tn + chr2R 18992206 intron tn + chr2R_12_18990001 chr2R_18990001 RAL-907 878 chr2R 19014603 19014648 chr2R 19014696 19014748 11 99 3.0 3.0 3.0 2.8 145 chr2R 19014603 intergenic not near genes chr2R 19014676 intergenic not near genes chr2R 19014748 intergenic not near genes chr2R_11_19010001 chr2R_19010001 RAL-907 879 chr2R 19015456 19015467 chr2R 19015524 19015532 5 82 1.5 3.0 2.2 1.6 76 chr2R 19015456 intergenic not near genes chr2R 19015494 intergenic not near genes chr2R 19015532 intergenic not near genes chr2R_5_19015001 chr2R_19015001 RAL-907 880 chr2R 19105500 19105525 chr2R 19105605 19105631 4 106 1.0 0.5 0.8 2.2 131 chr2R 19105500 intron 5-HT1A + chr2R 19105566 intron 5-HT1A + chr2R 19105631 intron 5-HT1A + chr2R_4_19105001 chr2R_19105001 RAL-907 881 chr2R 19128468 19128521 chr2R 19128578 19128630 5 109 0.0 0.0 0.0 5.0 162 chr2R 19128468 intron CG15117 - chr2R 19128549 intron CG15117 - chr2R 19128630 intron CG15117 - chr2R_5_19125001 chr2R_19125001 RAL-907 882 chr2R 19300946 19300994 chr2R 19301049 19301097 7 103 3.5 1.5 2.5 2.0 151 chr2R 19300946 intron Tab2 + chr2R 19301022 intron Tab2 + chr2R 19301097 intron Tab2 + chr2R_7_19300001 chr2R_19300001 RAL-907 883 chr2R 19376115 19376142 chr2R 19376328 19376355 5 213 0.0 8.0 4.0 1.0 240 chr2R 19376115 intron CG10062 + chr2R 19376235 intron CG10062 + chr2R 19376355 intron CG10062 + chr2R_5_19375001 chr2R_19375001 RAL-907 884 chr2R 19539647 19539691 chr2R 19539767 19539806 10 119 2.0 5.0 3.5 2.2 159 chr2R 19539647 intron sm - chr2R 19539726 intron sm - chr2R 19539806 intron sm - chr2R_10_19535001 chr2R_19535001 RAL-907 885 chr2R 19560664 19560699 chr2R 19560784 19560828 7 122 1.5 1.0 1.2 3.2 164 chr2R 19560664 intron sm - chr2R 19560746 intron sm - chr2R 19560828 intron sm - chr2R_7_19560001 chr2R_19560001 RAL-907 886 chr2R 19575549 19575572 chr2R 19575647 19575670 12 98 6.0 5.5 5.8 1.8 121 chr2R 19575549 intron sm - chr2R 19575610 intron sm - chr2R 19575670 intron sm - chr2R_12_19575001 chr2R_19575001 RAL-907 887 chr2R 19588735 19588782 chr2R 19588833 19588850 14 95 1.0 3.5 2.2 4.4 115 chr2R 19588735 intron sm - chr2R 19588792 intron sm - chr2R 19588850 intron sm - chr2R_14_19585001 chr2R_19585001 RAL-907 888 chr2R 19699877 19699913 chr2R 19699982 19700018 10 105 3.0 4.0 3.5 2.2 141 chr2R 19699877 intergenic Obp56c - chr2R 19699948 intergenic Obp56c - chr2R 19700018 3` UTR Obp56c - chr2R_10_19695001 chr2R_19695001 RAL-907 889 chr2R 19701501 19701525 chr2R 19701605 19701609 9 100 4.5 0.0 2.2 2.8 108 chr2R 19701501 intergenic Obp56c - chr2R 19701555 intergenic Obp56c - chr2R 19701609 intergenic Obp56c - chr2R_9_19700001 chr2R_19700001 RAL-907 890 chr2R 19776602 19776621 chr2R 19779945 19779964 jockey 6 3343 2.0 6.5 4.2 1.2 3362 chr2R 19776602 intergenic not near genes chr2R 19778283 intergenic not near genes chr2R 19779964 intergenic not near genes chr2R_6_19775001 chr2R_19775001 RAL-907 891 chr2R 19807652 19807701 chr2R 19807754 19807803 12 102 3.5 5.5 4.5 2.2 151 chr2R 19807652 intergenic not near genes chr2R 19807728 intergenic not near genes chr2R 19807803 intergenic not near genes chr2R_12_19805001 chr2R_19805001 RAL-907 892 chr2R 19847354 19847393 chr2R 19847468 19847507 19 112 6.5 6.5 6.5 2.5 153 chr2R 19847354 intergenic not near genes chr2R 19847430 intergenic not near genes chr2R 19847507 intergenic not near genes chr2R_19_19845001 chr2R_19845001 RAL-907 893 chr2R 19914836 19914876 chr2R 19922268 19922307 mdg1 5 7432 5.0 2.5 3.8 1.0 7471 chr2R 19914836 intergenic not near genes chr2R 19918572 intergenic not near genes chr2R 19922307 intergenic not near genes chr2R_5_19915001 chr2R_19915001 RAL-907 894 chr2R 19943254 19943295 chr2R 19943384 19943406 5 126 1.5 3.5 2.5 1.4 152 chr2R 19943254 intergenic not near genes chr2R 19943330 intergenic not near genes chr2R 19943406 intergenic not near genes chr2R_5_19940001 chr2R_19940001 RAL-907 895 chr2R 19957447 19957456 chr2R 19962656 19962677 copia 4 5216 5.5 8.0 6.8 0.5 5230 chr2R 19957447 intergenic CG44623 + chr2R 19960062 intergenic not near genes chr2R 19962677 intergenic not near genes chr2R_4_19960001 chr2R_19960001 RAL-907 896 chr2R 20063077 20063106 chr2R 20063153 20063208 11 85 3.5 2.5 3.0 2.8 131 chr2R 20063077 intergenic not near genes chr2R 20063142 intergenic not near genes chr2R 20063208 intergenic not near genes chr2R_11_20060001 chr2R_20060001 RAL-907 897 chr2R 20069218 20069251 chr2R 20071876 20071909 opus 7 2655 0.5 1.5 1.0 3.5 2691 chr2R 20069218 intergenic not near genes chr2R 20070564 intergenic not near genes chr2R 20071909 intergenic not near genes chr2R_7_20070001 chr2R_20070001 RAL-907 898 chr2R 20079822 20079869 chr2R 20079918 20079970 6 90 0.0 3.0 1.5 2.4 148 chr2R 20079822 intergenic not near genes chr2R 20079896 intergenic not near genes chr2R 20079970 intergenic not near genes chr2R_6_20075001 chr2R_20075001 RAL-907 899 chr2R 20118888 20118903 chr2R 20118974 20118991 5 91 3.0 2.5 2.8 1.3 103 chr2R 20118888 intergenic not near genes chr2R 20118940 intergenic not near genes chr2R 20118991 intergenic not near genes chr2R_5_20115001 chr2R_20115001 RAL-907 900 chr2R 20121428 20121470 chr2R 20121948 20122007 4 533 4.0 0.0 2.0 1.3 579 chr2R 20121428 intergenic not near genes chr2R 20121718 intergenic not near genes chr2R 20122007 intergenic not near genes chr2R_4_20120001 chr2R_20120001 RAL-907 901 chr2R 20125733 20125747 chr2R 20125829 20125843 4 96 4.0 9.5 6.8 0.5 110 chr2R 20125733 intergenic not near genes chr2R 20125788 intergenic not near genes chr2R 20125843 intergenic not near genes chr2R_4_20125001 chr2R_20125001 RAL-907 902 chr2R 20125962 20125989 chr2R 20126418 20126447 6 454 4.5 1.0 2.8 1.6 485 chr2R 20125962 intergenic not near genes chr2R 20126204 intergenic not near genes chr2R 20126447 intergenic not near genes chr2R_6_20125001 chr2R_20125001 RAL-907 903 chr2R 20142437 20142484 chr2R 20142536 20142580 15 96 0.5 7.0 3.8 3.1 143 chr2R 20142437 intergenic not near genes chr2R 20142508 intergenic not near genes chr2R 20142580 intergenic not near genes chr2R_15_20140001 chr2R_20140001 RAL-907 904 chr2R 20433622 20433670 chr2R 20434009 20434057 13 386 2.0 6.5 4.2 2.5 435 chr2R 20433622 intron CG12484 + chr2R 20433840 intron CG12484 + chr2R 20434057 intron CG12484 + chr2R_13_20430001 chr2R_20430001 RAL-907 905 chr2R 20489895 20489915 chr2R 20490017 20490037 5 120 1.0 12.5 6.8 0.6 142 chr2R 20489895 intergenic not near genes chr2R 20489966 intergenic not near genes chr2R 20490037 intergenic not near genes chr2R_5_20485001 chr2R_20485001 RAL-907 906 chr2R 20555312 20555337 chr2R 20555416 20555441 6 104 6.5 2.0 4.2 1.2 129 chr2R 20555312 intergenic not near genes chr2R 20555376 intergenic not near genes chr2R 20555441 intergenic not near genes chr2R_6_20555001 chr2R_20555001 RAL-907 907 chr2R 20572571 20572584 chr2R 20572664 20572694 4 106 0.5 3.0 1.8 1.4 123 chr2R 20572571 intron qsm - chr2R 20572632 intron qsm - chr2R 20572694 intron qsm - chr2R_4_20570001 chr2R_20570001 RAL-907 908 chr2R 20577076 20577092 chr2R 20577179 20577195 7 102 0.0 1.0 0.5 4.7 119 chr2R 20577076 intron qsm - chr2R 20577136 intron qsm - chr2R 20577195 intron qsm - chr2R_7_20575001 chr2R_20575001 RAL-907 909 chr2R 20590648 20590668 chr2R 20590747 20590767 8 98 3.5 2.5 3.0 2.0 119 chr2R 20590648 intron bl + chr2R 20590708 intron bl + chr2R 20590767 intron bl + chr2R_8_20590001 chr2R_20590001 RAL-907 910 chr2R 20702651 20702697 chr2R 20702747 20702792 13 91 3.5 6.0 4.8 2.2 141 chr2R 20702651 intron dpr + chr2R 20702722 intron dpr + chr2R 20702792 intron dpr + chr2R_13_20700001 chr2R_20700001 RAL-907 911 chr2R 20739430 20739458 chr2R 20744210 20744246 F-element 7 4785 2.5 3.5 3.0 1.8 4816 chr2R 20739430 intron dpr + chr2R 20741838 intron dpr + chr2R 20744246 intron dpr + chr2R_7_20740001 chr2R_20740001 RAL-907 912 chr2R 20783300 20783321 chr2R 20788084 20788095 F-element 5 4786 2.5 5.0 3.8 1.0 4795 chr2R 20783300 intergenic not near genes chr2R 20785698 intergenic not near genes chr2R 20788095 intergenic CG43666 - chr2R_5_20785001 chr2R_20785001 RAL-907 913 chr2R 20799163 20799191 chr2R 20799276 20799308 4 115 0.0 7.5 3.8 0.8 145 chr2R 20799163 intergenic not near genes chr2R 20799236 intergenic not near genes chr2R 20799308 intergenic not near genes chr2R_4_20795001 chr2R_20795001 RAL-907 914 chr2R 20838064 20838084 chr2R 20838165 20838185 9 101 0.0 3.0 1.5 3.6 121 chr2R 20838064 intron CR44667 + chr2R 20838124 intron CR44667 + chr2R 20838185 intron CR44667 + chr2R_9_20835001 chr2R_20835001 RAL-907 915 chr2R 20889524 20889572 chr2R 20889680 20889709 4 152 0.0 3.0 1.5 1.6 185 chr2R 20889524 intron otp - chr2R 20889616 intron otp - chr2R 20889709 intron otp - chr2R_4_20885001 chr2R_20885001 RAL-907 916 chr2R 20951036 20951066 chr2R 20951110 20951157 10 90 3.5 2.5 3.0 2.5 121 chr2R 20951036 3` UTR CG33704 + chr2R 20951096 intergenic CG33704 + chr2R 20951157 intergenic CG33704 + chr2R_10_20950001 chr2R_20950001 RAL-907 917 chr2R 21033952 21034004 chr2R 21034059 21034111 14 102 2.0 1.0 1.5 5.6 159 chr2R 21033952 intergenic not near genes chr2R 21034032 intergenic not near genes chr2R 21034111 intergenic not near genes chr2R_14_21030001 chr2R_21030001 RAL-907 918 chr2R 21057469 21057479 chr2R 21057570 21057580 5 100 7.0 0.0 3.5 1.1 111 chr2R 21057469 intergenic shg -,cpa + chr2R 21057524 intergenic cpa +,shg - chr2R 21057580 intergenic cpa +,shg - chr2R_5_21055001 chr2R_21055001 RAL-907 919 chr2R 21113467 21113484 chr2R 21113570 21113593 6 108 5.0 4.0 4.5 1.1 126 chr2R 21113467 intron ktub + chr2R 21113530 intron ktub + chr2R 21113593 intron ktub + chr2R_6_21110001 chr2R_21110001 RAL-907 920 chr2R 21117449 21117484 chr2R 21117825 21117853 14 374 4.0 1.5 2.8 3.7 404 chr2R 21117449 intron ktub + chr2R 21117651 intron ktub + chr2R 21117853 intron ktub + chr2R_14_21115001 chr2R_21115001 RAL-907 921 chr2R 21366512 21366525 chr2R 21366637 21366650 6 124 5.0 0.5 2.8 1.6 138 chr2R 21366512 intron cv-2 - chr2R 21366581 intron cv-2 - chr2R 21366650 intron cv-2 - chr2R_6_21365001 chr2R_21365001 RAL-907 922 chr2R 21370498 21370539 chr2R 21370625 21370666 17 125 2.0 4.5 3.2 4.0 168 chr2R 21370498 intron cv-2 - chr2R 21370582 intron cv-2 - chr2R 21370666 intron cv-2 - chr2R_17_21370001 chr2R_21370001 RAL-907 923 chr2R 21408361 21408399 chr2R 21408463 21408511 11 104 2.0 0.0 1.0 5.5 150 chr2R 21408361 intron Sdc - chr2R 21408436 intron Sdc - chr2R 21408511 intron Sdc - chr2R_11_21405001 chr2R_21405001 RAL-907 924 chr2R 21456542 21456554 chr2R 21456639 21456651 5 96 1.0 4.0 2.5 1.4 109 chr2R 21456542 intron Sdc - chr2R 21456596 intron Sdc - chr2R 21456651 intron Sdc - chr2R_5_21455001 chr2R_21455001 RAL-907 925 chr2R 21540667 21540696 chr2R 21540905 21540934 13 238 1.5 3.5 2.5 3.7 267 chr2R 21540667 intron Egfr + chr2R 21540800 intron Egfr + chr2R 21540934 intron Egfr + chr2R_13_21540001 chr2R_21540001 RAL-907 926 chr2R 21546020 21546064 chr2R 21546119 21546161 16 95 3.0 7.0 5.0 2.7 141 chr2R 21546020 intron Egfr + chr2R 21546090 intron Egfr + chr2R 21546161 intron Egfr + chr2R_16_21545001 chr2R_21545001 RAL-907 927 chr2R 21738276 21738308 chr2R 21747441 21747445 roo 5 9151 0.5 3.5 2.0 1.7 9169 chr2R 21738276 intergenic not near genes chr2R 21742860 intergenic not near genes chr2R 21747445 intergenic not near genes chr2R_5_21740001 chr2R_21740001 RAL-907 928 chr2R 21753062 21753114 chr2R 21753567 21753619 roo 17 500 2.0 4.0 3.0 4.2 557 chr2R 21753062 intergenic not near genes chr2R 21753340 intergenic not near genes chr2R 21753619 intergenic not near genes chr2R_17_21750001 chr2R_21750001 RAL-907 929 chr2R 21759556 21759591 chr2R 21759650 21759697 9 99 0.5 4.0 2.2 2.8 141 chr2R 21759556 intergenic not near genes chr2R 21759626 intergenic not near genes chr2R 21759697 intergenic not near genes chr2R_9_21755001 chr2R_21755001 RAL-907 930 chr2R 21805836 21805856 chr2R 21805933 21805933 4 90 3.5 4.0 3.8 0.8 97 chr2R 21805836 intergenic not near genes chr2R 21805884 intergenic not near genes chr2R 21805933 intergenic not near genes chr2R_4_21805001 chr2R_21805001 RAL-907 931 chr2R 21809504 21809525 chr2R 21817764 21817785 roo 7 8260 5.5 4.0 4.8 1.2 8281 chr2R 21809504 intergenic not near genes chr2R 21813644 intergenic not near genes chr2R 21817785 intergenic not near genes chr2R_7_21810001 chr2R_21810001 RAL-907 932 chr2R 21809526 21809556 chr2R 21817763 21817802 roo 4 8243 2.5 4.0 3.2 1.0 8276 chr2R 21809526 intergenic not near genes chr2R 21813664 intergenic not near genes chr2R 21817802 intergenic not near genes chr2R_4_21810001 chr2R_21810001 RAL-907 933 chr2R 21833504 21833550 chr2R 21833603 21833649 10 98 1.0 2.0 1.5 4.0 145 chr2R 21833504 exon CG34040 - chr2R 21833576 intergenic CG34040 - chr2R 21833649 intergenic CG34040 - chr2R_10_21830001 chr2R_21830001 RAL-907 934 chr2R 21857326 21857363 chr2R 21857436 21857474 4 111 7.0 2.0 4.5 0.7 148 chr2R 21857326 intergenic not near genes chr2R 21857400 intergenic not near genes chr2R 21857474 intergenic not near genes chr2R_4_21855001 chr2R_21855001 RAL-907 935 chr2R 21886117 21886158 chr2R 21886215 21886235 6 93 4.5 0.5 2.5 1.7 118 chr2R 21886117 intron Fili + chr2R 21886176 intron Fili + chr2R 21886235 intron Fili + chr2R_6_21885001 chr2R_21885001 RAL-907 936 chr2R 21906264 21906296 chr2R 21906385 21906417 11 120 4.5 4.5 4.5 2.0 153 chr2R 21906264 intron Fili + chr2R 21906340 intron Fili + chr2R 21906417 intron Fili + chr2R_11_21905001 chr2R_21905001 RAL-907 937 chr2R 21946748 21946795 chr2R 21946864 21946911 22 116 2.0 3.0 2.5 6.3 163 chr2R 21946748 intergenic Fili + chr2R 21946830 intergenic not near genes chr2R 21946911 intergenic not near genes chr2R_22_21945001 chr2R_21945001 RAL-907 938 chr2R 21967371 21967406 chr2R 21967466 21967493 19 93 3.0 5.5 4.2 3.7 122 chr2R 21967371 intron ppk9 + chr2R 21967432 intron ppk9 + chr2R 21967493 intron ppk9 + chr2R_19_21965001 chr2R_21965001 RAL-907 939 chr2R 21985538 21985564 chr2R 21985639 21985665 10 101 4.0 1.5 2.8 2.6 127 chr2R 21985538 intergenic CG30401 - chr2R 21985602 intergenic CG30401 - chr2R 21985665 3` UTR CG30401 - chr2R_10_21985001 chr2R_21985001 RAL-907 940 chr2R 21993354 21993404 chr2R 21993465 21993515 16 110 5.0 3.0 4.0 3.2 161 chr2R 21993354 intron CG34370 - chr2R 21993434 intron CG34370 - chr2R 21993515 intron CG34370 - chr2R_16_21990001 chr2R_21990001 RAL-907 941 chr2R 22004276 22004292 chr2R 22004390 22004406 5 114 8.0 0.5 4.2 1.0 130 chr2R 22004276 intron CG34370 - chr2R 22004341 intron CG34370 - chr2R 22004406 intron CG34370 - chr2R_5_22000001 chr2R_22000001 RAL-907 942 chr2R 22029507 22029534 chr2R 22029605 22029632 9 98 2.0 0.0 1.0 4.5 125 chr2R 22029507 intron CG34370 - chr2R 22029570 intron CG34370 - chr2R 22029632 intron CG34370 - chr2R_9_22025001 chr2R_22025001 RAL-907 943 chr2R 22037755 22037799 chr2R 22037857 22037901 7 102 1.0 0.0 0.5 4.7 146 chr2R 22037755 intron CG34370 - chr2R 22037828 intron CG34370 - chr2R 22037901 intron CG34370 - chr2R_7_22035001 chr2R_22035001 RAL-907 944 chr2R 22099872 22099883 chr2R 22099973 22099984 8 101 2.0 3.5 2.8 2.1 112 chr2R 22099872 intergenic CG11073 - chr2R 22099928 intergenic CG11073 - chr2R 22099984 intergenic CG11073 - chr2R_8_22095001 chr2R_22095001 RAL-907 945 chr2R 22201182 22201224 chr2R 22201292 22201334 8 107 3.0 4.0 3.5 1.8 152 chr2R 22201182 intron Swim - chr2R 22201258 intron Swim - chr2R 22201334 intron Swim - chr2R_8_22200001 chr2R_22200001 RAL-907 946 chr2R 22232468 22232519 chr2R 22232740 22232791 12 269 1.0 2.5 1.8 4.3 323 chr2R 22232468 intergenic not near genes chr2R 22232630 intergenic not near genes chr2R 22232791 intergenic not near genes chr2R_12_22230001 chr2R_22230001 RAL-907 947 chr2R 22290062 22290070 chr2R 22290166 22290173 4 104 11.5 4.5 8.0 0.4 111 chr2R 22290062 intergenic not near genes chr2R 22290118 intergenic not near genes chr2R 22290173 intergenic not near genes chr2R_4_22290001 chr2R_22290001 RAL-907 948 chr2R 22349694 22349715 chr2R 22351476 22351506 jockey 9 1799 6.5 4.0 5.2 1.5 1812 chr2R 22349694 intron Liprin-gamma - chr2R 22350600 intron Liprin-gamma - chr2R 22351506 intron Liprin-gamma - chr2R_9_22350001 chr2R_22350001 RAL-907 949 chr2R 22360371 22360389 chr2R 22360824 22360829 jockey 6 449 12.0 2.5 7.2 0.7 458 chr2R 22360371 intron Liprin-gamma - chr2R 22360600 intron Liprin-gamma - chr2R 22360829 intron Liprin-gamma - chr2R_6_22360001 chr2R_22360001 RAL-907 950 chr2R 22363669 22363716 chr2R 22363758 22363811 12 93 3.0 2.5 2.8 3.2 142 chr2R 22363669 intron Liprin-gamma - chr2R 22363740 intron Liprin-gamma - chr2R 22363811 intron Liprin-gamma - chr2R_12_22360001 chr2R_22360001 RAL-907 951 chr2R 22370754 22370783 chr2R 22370851 22370880 10 97 2.5 2.0 2.2 3.1 126 chr2R 22370754 intron Liprin-gamma - chr2R 22370817 intron Liprin-gamma - chr2R 22370880 intron Liprin-gamma - chr2R_10_22370001 chr2R_22370001 RAL-907 952 chr2R 22371035 22371049 chr2R 22371434 22371448 4 399 4.5 0.0 2.2 1.2 413 chr2R 22371035 intron Liprin-gamma - chr2R 22371242 intron Liprin-gamma - chr2R 22371448 intron Liprin-gamma - chr2R_4_22370001 chr2R_22370001 RAL-907 953 chr2R 22442555 22442582 chr2R 22442657 22442669 4 104 3.5 1.5 2.5 1.1 114 chr2R 22442555 intergenic not near genes chr2R 22442612 intergenic not near genes chr2R 22442669 intergenic not near genes chr2R_4_22440001 chr2R_22440001 RAL-907 954 chr2R 22465303 22465339 chr2R 22465517 22465558 BS 16 218 5.0 5.0 5.0 2.7 255 chr2R 22465303 intron CG10384 + chr2R 22465430 intron CG10384 + chr2R 22465558 intron CG10384 + chr2R_16_22465001 chr2R_22465001 RAL-907 955 chr2R 22477924 22477947 chr2R 22478097 22478120 10 173 0.5 2.0 1.2 4.5 196 chr2R 22477924 intergenic CG4752 + chr2R 22478022 intergenic CG4752 + chr2R 22478120 intergenic CG4752 + chr2R_10_22475001 chr2R_22475001 RAL-907 956 chr2R 22499852 22499886 chr2R 22499927 22499956 6 79 1.5 4.5 3.0 1.5 104 chr2R 22499852 intron px - chr2R 22499904 intron px - chr2R 22499956 intron px - chr2R_6_22495001 chr2R_22495001 RAL-907 957 chr2R 22503854 22503897 chr2R 22503969 22504012 10 115 0.5 2.5 1.5 4.0 158 chr2R 22503854 intron px - chr2R 22503933 intron px - chr2R 22504012 intron px - chr2R_10_22500001 chr2R_22500001 RAL-907 958 chr2R 22506698 22506725 chr2R 22506796 22506823 13 98 6.5 4.0 5.2 2.1 125 chr2R 22506698 intron px - chr2R 22506760 intron px - chr2R 22506823 intron px - chr2R_13_22505001 chr2R_22505001 RAL-907 959 chr2R 22525753 22525783 chr2R 22529329 22529354 jockey 10 3578 1.0 1.0 1.0 5.0 3601 chr2R 22525753 intron px - chr2R 22527554 intron px - chr2R 22529354 intron px - chr2R_10_22525001 chr2R_22525001 RAL-907 960 chr2R 22545599 22545648 chr2R 22545698 22545747 21 98 3.5 6.5 5.0 3.5 148 chr2R 22545599 intron px - chr2R 22545673 intron px - chr2R 22545747 intron px - chr2R_21_22545001 chr2R_22545001 RAL-907 961 chr2R 22575676 22575686 chr2R 22575745 22575780 5 79 1.5 6.0 3.8 1.0 104 chr2R 22575676 intron dnr1 - chr2R 22575728 intron dnr1 - chr2R 22575780 intron dnr1 - chr2R_5_22575001 chr2R_22575001 RAL-907 962 chr2R 22626920 22626954 chr2R 22627017 22627034 17 95 8.0 7.5 7.8 1.9 114 chr2R 22626920 intron CG33143 + chr2R 22626977 intron CG33143 + chr2R 22627034 intron CG33143 + chr2R_17_22625001 chr2R_22625001 RAL-907 963 chr2R 22774959 22774996 chr2R 22775382 22775435 jockey 11 432 7.0 4.0 5.5 1.7 476 chr2R 22774959 intron CG42260 - chr2R 22775197 intron CG42260 - chr2R 22775435 intron CG42260 - chr2R_11_22775001 chr2R_22775001 RAL-907 964 chr2R 22785715 22785760 chr2R 22785813 22785858 14 92 2.0 2.0 2.0 4.7 143 chr2R 22785715 intron CG42260 - chr2R 22785786 intron CG42260 - chr2R 22785858 intron CG42260 - chr2R_14_22785001 chr2R_22785001 RAL-907 965 chr2R 22839475 22839526 chr2R 22839574 22839630 6 98 2.5 0.0 1.2 2.7 155 chr2R 22839475 intergenic CG9825 + chr2R 22839552 intergenic CG9825 + chr2R 22839630 intergenic CG9825 + chr2R_6_22835001 chr2R_22835001 RAL-907 966 chr2R 22873618 22873661 chr2R 22873714 22873757 6 94 2.0 0.0 1.0 3.0 139 chr2R 22873618 exon CG13532 + chr2R 22873688 intron CG13532 + chr2R 22873757 intron CG13532 + chr2R_6_22870001 chr2R_22870001 RAL-907 967 chr2R 22945049 22945080 chr2R 22945166 22945214 15 129 5.0 5.0 5.0 2.5 165 chr2R 22945049 exon CG42694 + chr2R 22945132 3` UTR CG42694 + chr2R 22945214 intergenic CG42694 + chr2R_15_22945001 chr2R_22945001 RAL-907 968 chr2R 23115483 23115533 chr2R 23116017 23116067 8 534 3.5 3.0 3.2 1.9 584 chr2R 23115483 intergenic not near genes chr2R 23115775 intergenic not near genes chr2R 23116067 intergenic not near genes chr2R_8_23115001 chr2R_23115001 RAL-907 969 chr2R 23133286 23133321 chr2R 23133519 23133554 9 230 1.0 2.0 1.5 3.6 268 chr2R 23133286 intergenic not near genes chr2R 23133420 intergenic not near genes chr2R 23133554 intergenic not near genes chr2R_9_23130001 chr2R_23130001 RAL-907 970 chr2R 23175022 23175055 chr2R 23175119 23175152 4 96 4.5 5.5 5.0 0.7 130 chr2R 23175022 intron CG34371 - chr2R 23175087 intron CG34371 - chr2R 23175152 intron CG34371 - chr2R_4_23175001 chr2R_23175001 RAL-907 971 chr2R 23190002 23190019 chr2R 23190102 23190119 7 100 7.0 0.0 3.5 1.6 117 chr2R 23190002 intron CG34371 - chr2R 23190060 intron CG34371 - chr2R 23190119 intron CG34371 - chr2R_7_23190001 chr2R_23190001 RAL-907 972 chr2R 23351914 23351951 chr2R 23352008 23352052 4 99 0.5 3.5 2.0 1.3 138 chr2R 23351914 exon CG34210 + chr2R 23351983 3` UTR CG34210 + chr2R 23352052 3` UTR CG34210 + chr2R_4_23350001 chr2R_23350001 RAL-907 973 chr2R 23402593 23402606 chr2R 23407689 23407691 flea 5 5094 16.0 9.0 12.5 0.4 5098 chr2R 23402593 intergenic CG3520 - chr2R 23405142 intergenic not near genes chr2R 23407691 intergenic not near genes chr2R_5_23405001 chr2R_23405001 RAL-907 974 chr2R 23402607 23402641 chr2R 23407685 23407737 flea 9 5094 4.0 8.5 6.2 1.2 5130 chr2R 23402607 intergenic CG3520 - chr2R 23405172 intergenic not near genes chr2R 23407737 intergenic not near genes chr2R_9_23405001 chr2R_23405001 RAL-907 975 chr2R 23423718 23423768 chr2R 23423896 23423946 7 172 3.5 3.5 3.5 1.6 228 chr2R 23423718 intron CG9815 - chr2R 23423832 intron CG9815 - chr2R 23423946 intron CG9815 - chr2R_7_23420001 chr2R_23420001 RAL-907 976 chr2R 23518176 23518211 chr2R 23518274 23518309 12 97 3.5 5.5 4.5 2.2 133 chr2R 23518176 intergenic not near genes chr2R 23518242 intergenic not near genes chr2R 23518309 intergenic not near genes chr2R_12_23515001 chr2R_23515001 RAL-907 977 chr2R 23594819 23594864 chr2R 23595056 23595081 9 233 3.0 4.0 3.5 2.0 262 chr2R 23594819 intron apt + chr2R 23594950 intron apt + chr2R 23595081 intron apt + chr2R_9_23590001 chr2R_23590001 RAL-907 978 chr2R 23607016 23607193 chr2R 23607117 23607306 17 105 1.0 2.0 1.5 6.8 290 chr2R 23607016 intron CG17664 - chr2R 23607161 intron CG17664 - chr2R 23607306 intron CG17664 - chr2R_17_23605001 chr2R_23605001 RAL-907 979 chr2R 23718288 23718299 chr2R 23718418 23718457 11 143 26.5 36.0 31.2 0.3 169 chr2R 23718288 intron Sesn + chr2R 23718372 intron Sesn + chr2R 23718457 intron Sesn + chr2R_11_23715001 chr2R_23715001 RAL-907 980 chr2R 23745400 23745435 chr2R 23745496 23745531 13 95 2.0 4.5 3.2 3.1 131 chr2R 23745400 intron egl - chr2R 23745466 intron egl - chr2R 23745531 intron egl - chr2R_13_23745001 chr2R_23745001 RAL-907 981 chr2R 23784450 23784501 chr2R 23784548 23784570 6 92 3.0 3.0 3.0 1.5 120 chr2R 23784450 intron CG9850 - chr2R 23784510 intron CG9850 - chr2R 23784570 intron CG9850 - chr2R_6_23780001 chr2R_23780001 RAL-907 982 chr2R 23986493 23986546 chr2R 23986593 23986613 16 98 2.0 4.5 3.2 3.8 120 chr2R 23986493 intron Phm - chr2R 23986553 intron Phm - chr2R 23986613 intron Phm - chr2R_16_23985001 chr2R_23985001 RAL-907 983 chr2R 24045205 24045259 chr2R 24045309 24045363 20 104 1.5 2.5 2.0 6.7 158 chr2R 24045205 intron tsr - chr2R 24045284 intron tsr - chr2R 24045363 intron tsr - chr2R_20_24045001 chr2R_24045001 RAL-907 984 chr2R 24077972 24078008 chr2R 24078122 24078152 15 147 4.0 4.5 4.2 2.9 180 chr2R 24077972 3` UTR Mlp60A + chr2R 24078062 3` UTR Mlp60A + chr2R 24078152 3` UTR Mlp60A + chr2R_15_24075001 chr2R_24075001 RAL-907 985 chr2R 24177214 24177257 chr2R 24184719 24184762 412 9 7505 9.0 5.5 7.2 1.1 7548 chr2R 24177214 3` UTR Nop60B + chr2R 24180988 intron Nop60B + chr2R 24184762 3` UTR Nop60B + chr2R_9_24180001 chr2R_24180001 RAL-907 986 chr2R 24219515 24219613 chr2R 24219614 24219698 13 115 0.0 0.0 0.0 13.0 183 chr2R 24219515 intron CG30419 - chr2R 24219606 intron CG30419 - chr2R 24219698 intron CG30419 - chr2R_13_24215001 chr2R_24215001 RAL-907 987 chr2R 24224475 24224507 chr2R 24224867 24224906 6 394 3.5 0.5 2.0 2.0 431 chr2R 24224475 intron CG30419 - chr2R 24224690 intron CG30419 - chr2R 24224906 intron CG30419 - chr2R_6_24220001 chr2R_24220001 RAL-907 988 chr2R 24353411 24353444 chr2R 24361792 24361826 roo 7 8381 6.5 5.0 5.8 1.0 8415 chr2R 24353411 intron,intron bs +,CR44811 - chr2R 24357618 intron,intron bs +,CR44811 - chr2R 24361826 intron,intron bs +,CR44811 - chr2R_7_24355001 chr2R_24355001 RAL-907 989 chr2R 24493070 24493086 chr2R 24493179 24493195 5 109 6.0 2.5 4.2 1.0 125 chr2R 24493070 intergenic CG13590 -,CG13589 - chr2R 24493132 intergenic CG13590 -,CG13589 - chr2R 24493195 intergenic CG13590 -,CG13589 - chr2R_5_24490001 chr2R_24490001 RAL-907 990 chr2R 24542574 24542627 chr2R 24542690 24542693 10 98 2.5 3.5 3.0 2.5 119 chr2R 24542574 intron,intron CG4622 -,ITP + chr2R 24542634 intron,intron CG4622 -,ITP + chr2R 24542693 intron,intron CG4622 -,ITP + chr2R_10_24540001 chr2R_24540001 RAL-907 991 chr2R 24647556 24647611 chr2R 24655147 24655147 412 7 7579 1.0 1.0 1.0 3.5 7591 chr2R 24647556 intergenic not near genes chr2R 24651352 intergenic not near genes chr2R 24655147 intergenic not near genes chr2R_7_24650001 chr2R_24650001 RAL-907 992 chr2R 24727879 24727918 chr2R 24735405 24735437 mdg1 7 7526 2.0 5.0 3.5 1.6 7558 chr2R 24727879 intron Mid1 - chr2R 24731658 intron Mid1 - chr2R 24735437 intron Mid1 - chr2R_7_24730001 chr2R_24730001 RAL-907 993 chr2R 24884031 24884073 chr2R 24884133 24884175 18 101 4.0 1.5 2.8 4.7 144 chr2R 24884031 intron NKAIN + chr2R 24884103 intron NKAIN + chr2R 24884175 intron NKAIN + chr2R_18_24880001 chr2R_24880001 RAL-907 994 chr2R 24897909 24897946 chr2R 24898003 24898047 6 95 5.5 2.5 4.0 1.2 138 chr2R 24897909 intron,3` UTR NaCP60E +,Tpc2 - chr2R 24897978 intron,3` UTR NaCP60E +,Tpc2 - chr2R 24898047 intron,3` UTR NaCP60E +,Tpc2 - chr2R_6_24895001 chr2R_24895001 RAL-907 995 chr2R 25004878 25004920 chr2R 25004972 25005018 11 94 3.5 4.0 3.8 2.3 140 chr2R 25004878 intron zip - chr2R 25004948 intron zip - chr2R 25005018 intron zip - chr2R_11_25000001 chr2R_25000001 RAL-907 996 chr2R 25014555 25014574 chr2R 25014621 25014670 7 81 4.0 5.0 4.5 1.3 115 chr2R 25014555 intron uzip + chr2R 25014612 intron uzip + chr2R 25014670 intron uzip + chr2R_7_25010001 chr2R_25010001 RAL-907 997 chr2R 25018340 25018362 chr2R 25018439 25018463 7 104 3.5 3.0 3.2 1.7 123 chr2R 25018340 intron uzip + chr2R 25018402 intron uzip + chr2R 25018463 intron uzip + chr2R_7_25015001 chr2R_25015001 RAL-907 998 chr2R 25022628 25022673 chr2R 25022727 25022777 13 103 4.0 4.5 4.2 2.5 149 chr2R 25022628 intron uzip + chr2R 25022702 intron uzip + chr2R 25022777 intron uzip + chr2R_13_25020001 chr2R_25020001 RAL-907 999 chr2R 25061974 25062009 chr2R 25062073 25062108 10 99 3.0 5.0 4.0 2.0 134 chr2R 25061974 5` UTR gsb + chr2R 25062041 5` UTR gsb + chr2R 25062108 5` UTR gsb + chr2R_10_25060001 chr2R_25060001 RAL-907 1000 chr2R 25076517 25076556 chr2R 25076685 25076718 8 162 0.5 3.0 1.8 2.9 201 chr2R 25076517 intron gol - chr2R 25076618 intron gol - chr2R 25076718 intron gol - chr2R_8_25075001 chr2R_25075001 RAL-907 1001 chr2R 25080289 25080334 chr2R 25080679 25080706 8 386 3.0 2.5 2.8 2.1 417 chr2R 25080289 intron gol - chr2R 25080498 intron gol - chr2R 25080706 intron gol - chr2R_8_25080001 chr2R_25080001 RAL-907 1002 chr2R 25101266 25101299 chr2R 25101385 25101421 8 120 3.0 1.5 2.2 2.5 155 chr2R 25101266 intron lov - chr2R 25101344 intron lov - chr2R 25101421 intron lov - chr2R_8_25100001 chr2R_25100001 RAL-907 1003 chr2R 25122945 25122954 chr2R 25123043 25123053 4 98 7.5 1.5 4.5 0.7 108 chr2R 25122945 intron lov - chr2R 25122999 intron lov - chr2R 25123053 intron lov - chr2R_4_25120001 chr2R_25120001 RAL-907 1004 chr2R 25122959 25122990 chr2R 25123041 25123089 9 93 3.0 1.5 2.2 2.8 130 chr2R 25122959 intron lov - chr2R 25123024 intron lov - chr2R 25123089 intron lov - chr2R_9_25120001 chr2R_25120001 RAL-907 1005 chr2R 25141637 25141683 chr2R 25159345 25159377 roo 8 17706 2.5 3.5 3.0 2.0 17740 chr2R 25141637 intergenic not near genes chr2R 25150507 intergenic not near genes chr2R 25159377 intergenic not near genes chr2R_8_25150001 chr2R_25150001 RAL-907 1006 chr2R 25176874 25176920 chr2R 25177161 25177162 10 279 1.5 2.5 2.0 3.3 288 chr2R 25176874 intergenic Peb - chr2R 25177018 intergenic Peb - chr2R 25177162 intergenic Peb - chr2R_10_25175001 chr2R_25175001 RAL-907 1007 chr2R 25181104 25181132 chr2R 25181221 25181249 12 116 3.5 3.0 3.2 2.9 145 chr2R 25181104 intergenic not near genes chr2R 25181176 intergenic not near genes chr2R 25181249 intergenic not near genes chr2R_12_25180001 chr2R_25180001 RAL-907 1008 chr2R 25191712 25191719 chr2R 25191810 25191817 5 98 2.5 7.0 4.8 0.9 105 chr2R 25191712 intron CG9380 - chr2R 25191764 intron CG9380 - chr2R 25191817 intron CG9380 - chr2R_5_25190001 chr2R_25190001 RAL-907 1009 chr2R 25236017 25236044 chr2R 25236148 25236175 7 131 2.5 1.5 2.0 2.3 158 chr2R 25236017 intron CG9380 - chr2R 25236096 intron CG9380 - chr2R 25236175 intron CG9380 - chr2R_7_25235001 chr2R_25235001 RAL-907 1010 chr2R 25253427 25253475 chr2R 25253522 25253546 11 89 3.0 4.5 3.8 2.3 119 chr2R 25253427 intron,intron CG9380 -,CG30428 + chr2R 25253486 intron,intron CG9380 -,CG30428 + chr2R 25253546 intron,intron CG9380 -,CG30428 + chr2R_11_25250001 chr2R_25250001 RAL-907 1011 chr3L 52895 52925 chr3L 52999 53029 5 104 4.0 4.5 4.2 1.0 134 chr3L 52895 intergenic not near genes chr3L 52962 intergenic not near genes chr3L 53029 intergenic not near genes chr3L_5_50001 chr3L_50001 RAL-907 1012 chr3L 68960 69015 chr3L 69067 69122 11 101 4.0 1.0 2.5 3.1 162 chr3L 68960 3` UTR Lsp1gamma + chr3L 69041 intergenic Lsp1gamma +,CR44510 + chr3L 69122 intergenic CR44510 +,Lsp1gamma + chr3L_11_65001 chr3L_65001 RAL-907 1013 chr3L 110192 110242 chr3L 119378 119428 roo 14 9185 8.5 4.0 6.2 1.9 9236 chr3L 110192 intergenic not near genes chr3L 114810 intergenic not near genes chr3L 119428 intergenic not near genes chr3L_14_110001 chr3L_110001 RAL-907 1014 chr3L 365504 365552 chr3L 365610 365658 14 105 3.0 4.0 3.5 3.1 154 chr3L 365504 3` UTR CG1233 + chr3L 365581 3` UTR CG1233 + chr3L 365658 3` UTR CG1233 + chr3L_14_365001 chr3L_365001 RAL-907 1015 chr3L 402706 402718 chr3L 409749 409791 297 6 7062 2.0 7.5 4.8 1.0 7085 chr3L 402706 intergenic not near genes chr3L 406248 intergenic not near genes chr3L 409791 intergenic not near genes chr3L_6_405001 chr3L_405001 RAL-907 1016 chr3L 561467 561494 chr3L 561564 561591 11 97 6.5 0.0 3.2 2.6 124 chr3L 561467 intron hipk + chr3L 561529 intron hipk + chr3L 561591 intron hipk + chr3L_11_560001 chr3L_560001 RAL-907 1017 chr3L 566777 566811 chr3L 567150 567168 5 367 2.5 1.0 1.8 1.8 391 chr3L 566777 intron hipk + chr3L 566972 intron hipk + chr3L 567168 intron hipk + chr3L_5_565001 chr3L_565001 RAL-907 1018 chr3L 592945 592964 chr3L 593041 593060 12 96 7.0 7.5 7.2 1.5 115 chr3L 592945 intergenic MED14 + chr3L 593002 intergenic MED14 + chr3L 593060 intergenic MED14 + chr3L_12_590001 chr3L_590001 RAL-907 1019 chr3L 606875 606919 chr3L 606971 607018 6 98 0.0 0.0 0.0 6.0 143 chr3L 606875 intergenic Reg-2 - chr3L 606946 intergenic Reg-2 - chr3L 607018 intergenic Reg-2 - chr3L_6_605001 chr3L_605001 RAL-907 1020 chr3L 618417 618434 chr3L 618562 618579 9 145 8.0 2.0 5.0 1.5 162 chr3L 618417 intergenic not near genes chr3L 618498 intergenic not near genes chr3L 618579 intergenic not near genes chr3L_9_615001 chr3L_615001 RAL-907 1021 chr3L 642452 642495 chr3L 642563 642591 10 109 4.5 6.0 5.2 1.6 139 chr3L 642452 5` UTR CR43334 + chr3L 642522 5` UTR CR43334 + chr3L 642591 5` UTR CR43334 + chr3L_10_640001 chr3L_640001 RAL-907 1022 chr3L 651375 651394 chr3L 651483 651495 6 105 7.0 7.0 7.0 0.8 120 chr3L 651375 intergenic Gale +,CG3402 - chr3L 651435 intergenic CG3402 -,Gale + chr3L 651495 intergenic CG3402 -,Gale + chr3L_6_650001 chr3L_650001 RAL-907 1023 chr3L 651396 651420 chr3L 651482 651528 18 104 4.0 6.5 5.2 2.9 132 chr3L 651396 intergenic Gale +,CG3402 - chr3L 651462 intergenic CG3402 -,Gale + chr3L 651528 intergenic CG3402 -,Gale + chr3L_18_650001 chr3L_650001 RAL-907 1024 chr3L 684677 684729 chr3L 684772 684828 10 97 2.0 4.0 3.0 2.5 151 chr3L 684677 exon ebd1 - chr3L 684752 intron ebd1 - chr3L 684828 intron ebd1 - chr3L_10_680001 chr3L_680001 RAL-907 1025 chr3L 705880 705926 chr3L 705996 706042 26 116 6.0 5.5 5.8 3.8 162 chr3L 705880 intergenic CG13895 -,CR44514 + chr3L 705961 3` UTR CG13895 - chr3L 706042 3` UTR CG13895 - chr3L_26_705001 chr3L_705001 RAL-907 1026 chr3L 748190 748243 chr3L 748289 748341 11 98 2.5 2.5 2.5 3.1 151 chr3L 748190 intron hng3 - chr3L 748266 intron hng3 - chr3L 748341 intron hng3 - chr3L_11_745001 chr3L_745001 RAL-907 1027 chr3L 789896 789908 chr3L 790401 790413 roo 5 505 5.0 1.0 3.0 1.2 517 chr3L 789896 intergenic not near genes chr3L 790154 intergenic not near genes chr3L 790413 intergenic not near genes chr3L_5_790001 chr3L_790001 RAL-907 1028 chr3L 900005 900016 chr3L 900108 900120 4 104 0.0 10.0 5.0 0.7 115 chr3L 900005 intergenic not near genes chr3L 900062 intergenic not near genes chr3L 900120 intergenic not near genes chr3L_4_900001 chr3L_900001 RAL-907 1029 chr3L 901405 901441 chr3L 901507 901514 4 94 5.0 2.0 3.5 0.9 109 chr3L 901405 intergenic not near genes chr3L 901460 intergenic not near genes chr3L 901514 intergenic not near genes chr3L_4_900001 chr3L_900001 RAL-907 1030 chr3L 925178 925187 chr3L 932619 932633 mdg1 4 7444 3.5 7.5 5.5 0.6 7455 chr3L 925178 intron Glut1 + chr3L 928906 intron Glut1 + chr3L 932633 intron Glut1 + chr3L_4_925001 chr3L_925001 RAL-907 1031 chr3L 925189 925208 chr3L 932602 932654 mdg1 8 7440 1.5 4.5 3.0 2.0 7465 chr3L 925189 intron Glut1 + chr3L 928922 intron Glut1 + chr3L 932654 intron Glut1 + chr3L_8_925001 chr3L_925001 RAL-907 1032 chr3L 933890 933944 chr3L 934014 934067 13 122 4.0 4.0 4.0 2.6 177 chr3L 933890 intron Glut1 + chr3L 933978 intron Glut1 + chr3L 934067 intron Glut1 + chr3L_13_930001 chr3L_930001 RAL-907 1033 chr3L 939758 939769 chr3L 940899 940910 jockey 4 1141 3.0 5.5 4.2 0.8 1152 chr3L 939758 intron Glut1 + chr3L 940334 intron Glut1 + chr3L 940910 intron Glut1 + chr3L_4_940001 chr3L_940001 RAL-907 1034 chr3L 939771 939794 chr3L 940892 940935 jockey 5 1136 3.0 4.0 3.5 1.1 1164 chr3L 939771 intron Glut1 + chr3L 940353 intron Glut1 + chr3L 940935 intron Glut1 + chr3L_5_940001 chr3L_940001 RAL-907 1035 chr3L 960997 961043 chr3L 961110 961156 15 113 3.5 3.5 3.5 3.3 159 chr3L 960997 intron Glut1 + chr3L 961076 intron Glut1 + chr3L 961156 intron Glut1 + chr3L_15_960001 chr3L_960001 RAL-907 1036 chr3L 986631 986642 chr3L 986726 986738 7 96 6.0 8.0 7.0 0.9 107 chr3L 986631 intergenic not near genes chr3L 986684 intergenic not near genes chr3L 986738 intergenic not near genes chr3L_7_985001 chr3L_985001 RAL-907 1037 chr3L 986644 986660 chr3L 986718 986755 4 90 3.0 8.0 5.5 0.6 111 chr3L 986644 intergenic not near genes chr3L 986700 intergenic not near genes chr3L 986755 intergenic not near genes chr3L_4_985001 chr3L_985001 RAL-907 1038 chr3L 1003052 1003080 chr3L 1003137 1003147 4 86 1.5 6.5 4.0 0.8 95 chr3L 1003052 intron trio - chr3L 1003100 intron trio - chr3L 1003147 intron trio - chr3L_4_1000001 chr3L_1000001 RAL-907 1039 chr3L 1010981 1011000 chr3L 1011081 1011088 4 96 6.5 6.0 6.2 0.6 107 chr3L 1010981 intron trio - chr3L 1011034 intron trio - chr3L 1011088 intron trio - chr3L_4_1010001 chr3L_1010001 RAL-907 1040 chr3L 1011010 1011219 chr3L 1011078 1011316 4 82 6.0 5.5 5.8 0.6 306 chr3L 1011010 intron trio - chr3L 1011163 intron trio - chr3L 1011316 intron trio - chr3L_4_1010001 chr3L_1010001 RAL-907 1041 chr3L 1040533 1040537 chr3L 1040637 1040641 4 104 4.5 2.0 3.2 1.0 108 chr3L 1040533 intron bab1 - chr3L 1040587 intron bab1 - chr3L 1040641 intron bab1 - chr3L_4_1040001 chr3L_1040001 RAL-907 1042 chr3L 1040539 1040563 chr3L 1040634 1040667 7 101 3.5 2.0 2.8 1.8 128 chr3L 1040539 intron bab1 - chr3L 1040603 intron bab1 - chr3L 1040667 intron bab1 - chr3L_7_1040001 chr3L_1040001 RAL-907 1043 chr3L 1109612 1109667 chr3L 1109720 1109745 20 100 3.5 2.0 2.8 5.3 133 chr3L 1109612 intergenic not near genes chr3L 1109678 intergenic not near genes chr3L 1109745 intergenic not near genes chr3L_20_1105001 chr3L_1105001 RAL-907 1044 chr3L 1145232 1145260 chr3L 1145331 1145340 5 94 3.0 0.0 1.5 2.0 108 chr3L 1145232 intron bab2 - chr3L 1145286 intron bab2 - chr3L 1145340 intron bab2 - chr3L_5_1145001 chr3L_1145001 RAL-907 1045 chr3L 1154111 1154160 chr3L 1163281 1163327 roo 10 9166 2.5 3.0 2.8 2.6 9216 chr3L 1154111 intron bab2 - chr3L 1158719 intron bab2 - chr3L 1163327 intron bab2 - chr3L_10_1155001 chr3L_1155001 RAL-907 1046 chr3L 1219574 1219624 chr3L 1227327 1227341 412 7 7744 2.0 3.5 2.8 1.8 7767 chr3L 1219574 intron mwh + chr3L 1223458 intron mwh + chr3L 1227341 intron mwh + chr3L_7_1220001 chr3L_1220001 RAL-907 1047 chr3L 1359312 1359322 chr3L 1359390 1359422 5 93 3.0 2.5 2.8 1.3 110 chr3L 1359312 intron Ptp61F - chr3L 1359367 intron Ptp61F - chr3L 1359422 intron Ptp61F - chr3L_5_1355001 chr3L_1355001 RAL-907 1048 chr3L 1374417 1374446 chr3L 1374514 1374523 4 92 9.0 4.5 6.8 0.5 106 chr3L 1374417 intron,intron Ptp61F -,ru + chr3L 1374470 intron,intron Ptp61F -,ru + chr3L 1374523 intron,intron Ptp61F -,ru + chr3L_4_1370001 chr3L_1370001 RAL-907 1049 chr3L 1463414 1463447 chr3L 1463496 1463519 7 85 1.0 3.0 2.0 2.3 105 chr3L 1463414 intron Ptp61F - chr3L 1463466 intron Ptp61F - chr3L 1463519 intron Ptp61F - chr3L_7_1460001 chr3L_1460001 RAL-907 1050 chr3L 1481004 1481010 chr3L 1481084 1481110 4 94 3.5 5.0 4.2 0.8 106 chr3L 1481004 intron stet - chr3L 1481057 intron stet - chr3L 1481110 intron stet - chr3L_4_1480001 chr3L_1480001 RAL-907 1051 chr3L 1506002 1506031 chr3L 1513592 1513648 17.6 6 7612 4.0 2.5 3.2 1.4 7646 chr3L 1506002 intron,intron Psa +,cue - chr3L 1509825 intron,intron Psa +,cue - chr3L 1513648 intron,intron Psa +,cue - chr3L_6_1505001 chr3L_1505001 RAL-907 1052 chr3L 1570577 1570599 chr3L 1570682 1570690 7 102 2.0 1.0 1.5 2.8 113 chr3L 1570577 intron CG12004 + chr3L 1570634 intron CG12004 + chr3L 1570690 intron CG12004 + chr3L_7_1570001 chr3L_1570001 RAL-907 1053 chr3L 1571474 1571495 chr3L 1571568 1571600 13 104 3.5 5.5 4.5 2.4 126 chr3L 1571474 intron CG12004 + chr3L 1571537 intron CG12004 + chr3L 1571600 intron CG12004 + chr3L_13_1570001 chr3L_1570001 RAL-907 1054 chr3L 1639230 1639242 chr3L 1639396 1639441 6 194 1.0 5.0 3.0 1.5 211 chr3L 1639230 5` UTR metl - chr3L 1639336 intergenic metl -,Bgb + chr3L 1639441 intergenic metl -,Bgb + chr3L_6_1635001 chr3L_1635001 RAL-907 1055 chr3L 1740834 1740886 chr3L 1741099 1741149 pogo 14 258 3.0 3.0 3.0 3.5 315 chr3L 1740834 intron Gk + chr3L 1740992 intron Gk + chr3L 1741149 intron Gk + chr3L_14_1740001 chr3L_1740001 RAL-907 1056 chr3L 1805687 1805702 chr3L 1805881 1805896 5 194 4.5 4.0 4.2 1.0 209 chr3L 1805687 exon CG42676 + chr3L 1805792 intron CG42676 + chr3L 1805896 intron CG42676 + chr3L_5_1805001 chr3L_1805001 RAL-907 1057 chr3L 1809990 1810031 chr3L 1810200 1810241 5 209 1.5 1.5 1.5 2.0 251 chr3L 1809990 intergenic not near genes chr3L 1810116 intergenic GV1 + chr3L 1810241 intergenic GV1 + chr3L_5_1810001 chr3L_1810001 RAL-907 1058 chr3L 1821634 1821646 chr3L 1821734 1821735 4 98 9.0 4.0 6.5 0.5 101 chr3L 1821634 intron GV1 + chr3L 1821684 intron GV1 + chr3L 1821735 intron GV1 + chr3L_4_1820001 chr3L_1820001 RAL-907 1059 chr3L 1853026 1853045 chr3L 1853130 1853149 7 104 4.5 4.0 4.2 1.3 123 chr3L 1853026 intron CG13936 - chr3L 1853088 intron CG13936 - chr3L 1853149 intron CG13936 - chr3L_7_1850001 chr3L_1850001 RAL-907 1060 chr3L 1991123 1991146 chr3L 1991201 1991244 13 94 4.0 2.0 3.0 3.2 121 chr3L 1991123 intergenic not near genes chr3L 1991184 intergenic not near genes chr3L 1991244 intergenic not near genes chr3L_13_1990001 chr3L_1990001 RAL-907 1061 chr3L 2035246 2035287 chr3L 2035342 2035352 5 88 3.0 0.0 1.5 2.0 106 chr3L 2035246 intergenic not near genes chr3L 2035299 intergenic not near genes chr3L 2035352 intergenic not near genes chr3L_5_2035001 chr3L_2035001 RAL-907 1062 chr3L 2108232 2108283 chr3L 2113456 2113507 copia 17 5223 1.5 5.0 3.2 4.0 5275 chr3L 2108232 intron sls - chr3L 2110870 intron sls - chr3L 2113507 intron sls - chr3L_17_2110001 chr3L_2110001 RAL-907 1063 chr3L 2139185 2139226 chr3L 2139286 2139327 11 101 3.0 4.0 3.5 2.4 142 chr3L 2139185 intron zormin - chr3L 2139256 intron zormin - chr3L 2139327 intron zormin - chr3L_11_2135001 chr3L_2135001 RAL-907 1064 chr3L 2168763 2168797 chr3L 2168873 2168884 8 107 2.5 4.5 3.5 1.8 121 chr3L 2168763 exon CG15879 - chr3L 2168824 intron CG15879 - chr3L 2168884 intron CG15879 - chr3L_8_2165001 chr3L_2165001 RAL-907 1065 chr3L 2176665 2176714 chr3L 2177094 2177143 18 427 2.0 3.0 2.5 5.1 478 chr3L 2176665 intergenic not near genes chr3L 2176904 intergenic not near genes chr3L 2177143 intergenic not near genes chr3L_18_2175001 chr3L_2175001 RAL-907 1066 chr3L 2199791 2199821 chr3L 2199887 2199917 4 95 0.0 4.0 2.0 1.3 126 chr3L 2199791 intergenic not near genes chr3L 2199854 intergenic not near genes chr3L 2199917 intergenic not near genes chr3L_4_2195001 chr3L_2195001 RAL-907 1067 chr3L 2307983 2308022 chr3L 2308109 2308148 14 122 7.5 2.5 5.0 2.3 165 chr3L 2307983 intergenic not near genes chr3L 2308066 intergenic not near genes chr3L 2308148 intergenic not near genes chr3L_14_2305001 chr3L_2305001 RAL-907 1068 chr3L 2336806 2336846 chr3L 2336904 2336944 9 98 4.0 5.0 4.5 1.6 138 chr3L 2336806 intron MsR1 + chr3L 2336875 intron MsR1 + chr3L 2336944 intron MsR1 + chr3L_9_2335001 chr3L_2335001 RAL-907 1069 chr3L 2447485 2447531 chr3L 2456661 2456676 roo 12 9172 6.5 4.0 5.2 1.9 9191 chr3L 2447485 intron CG45186 + chr3L 2452080 intron CG45186 + chr3L 2456676 intron CG45186 + chr3L_12_2450001 chr3L_2450001 RAL-907 1070 chr3L 2459134 2459163 chr3L 2459315 2459344 8 175 2.5 7.0 4.8 1.4 210 chr3L 2459134 intron CG45186 + chr3L 2459239 intron CG45186 + chr3L 2459344 intron CG45186 + chr3L_8_2455001 chr3L_2455001 RAL-907 1071 chr3L 2533645 2533679 chr3L 2533741 2533770 4 92 3.5 9.5 6.5 0.5 125 chr3L 2533645 intron Spn - chr3L 2533708 intron Spn - chr3L 2533770 intron Spn - chr3L_4_2530001 chr3L_2530001 RAL-907 1072 chr3L 2554040 2554073 chr3L 2554138 2554171 9 98 3.5 0.0 1.8 3.2 131 chr3L 2554040 intron Spn - chr3L 2554106 5` UTR Spn - chr3L 2554171 5` UTR Spn - chr3L_9_2550001 chr3L_2550001 RAL-907 1073 chr3L 2591692 2591739 chr3L 2591799 2591846 20 107 4.5 4.0 4.2 3.8 154 chr3L 2591692 intron dos + chr3L 2591769 intron dos + chr3L 2591846 intron dos + chr3L_20_2590001 chr3L_2590001 RAL-907 1074 chr3L 2657082 2657133 chr3L 2657183 2657227 8 100 3.0 1.0 2.0 2.7 145 chr3L 2657082 3` UTR Fife - chr3L 2657154 3` UTR Fife - chr3L 2657227 3` UTR Fife - chr3L_8_2655001 chr3L_2655001 RAL-907 1075 chr3L 2667872 2667924 chr3L 2667967 2668020 8 80 4.5 1.0 2.8 2.1 148 chr3L 2667872 intron Fife - chr3L 2667946 intron Fife - chr3L 2668020 intron Fife - chr3L_8_2665001 chr3L_2665001 RAL-907 1076 chr3L 2683928 2683975 chr3L 2684024 2684071 13 96 4.0 6.0 5.0 2.2 143 chr3L 2683928 intron Fife - chr3L 2684000 intron Fife - chr3L 2684071 intron Fife - chr3L_13_2680001 chr3L_2680001 RAL-907 1077 chr3L 2719522 2719557 chr3L 2719644 2719674 7 121 1.0 3.5 2.2 2.2 152 chr3L 2719522 3` UTR Mrtf - chr3L 2719598 3` UTR Mrtf - chr3L 2719674 3` UTR Mrtf - chr3L_7_2715001 chr3L_2715001 RAL-907 1078 chr3L 2751453 2751457 chr3L 2755768 2755771 F-element 4 4315 11.0 9.5 10.2 0.4 4318 chr3L 2751453 intron Mrtf - chr3L 2753612 intron Mrtf - chr3L 2755771 intron Mrtf - chr3L_4_2750001 chr3L_2750001 RAL-907 1079 chr3L 2766719 2766756 chr3L 2766829 2766873 7 114 6.0 2.0 4.0 1.4 154 chr3L 2766719 intergenic Mrtf -,Non2 + chr3L 2766796 intergenic Non2 +,Mrtf - chr3L 2766873 intergenic Non2 +,Mrtf - chr3L_7_2765001 chr3L_2765001 RAL-907 1080 chr3L 2863780 2863814 chr3L 2863880 2863896 7 97 2.5 0.0 1.2 3.2 116 chr3L 2863780 intron CG43444 - chr3L 2863838 intron CG43444 - chr3L 2863896 intron CG43444 - chr3L_7_2860001 chr3L_2860001 RAL-907 1081 chr3L 2927825 2927865 chr3L 2936122 2936137 Tirant 9 8294 3.0 8.0 5.5 1.4 8312 chr3L 2927825 intron Shab + chr3L 2931981 intron Shab + chr3L 2936137 intron Shab + chr3L_9_2930001 chr3L_2930001 RAL-907 1082 chr3L 2966704 2966728 chr3L 2974148 2974172 mdg1 15 7443 6.0 3.0 4.5 2.7 7468 chr3L 2966704 intergenic not near genes chr3L 2970438 intergenic not near genes chr3L 2974172 intergenic not near genes chr3L_15_2970001 chr3L_2970001 RAL-907 1083 chr3L 2983280 2983293 chr3L 2983382 2983395 6 102 10.5 0.0 5.2 1.0 115 chr3L 2983280 exon CG2107 + chr3L 2983338 3` UTR CG2107 + chr3L 2983395 3` UTR CG2107 + chr3L_6_2980001 chr3L_2980001 RAL-907 1084 chr3L 2987697 2987722 chr3L 2987799 2987824 5 102 2.0 0.0 1.0 2.5 127 chr3L 2987697 intergenic not near genes chr3L 2987760 intergenic not near genes chr3L 2987824 intergenic not near genes chr3L_5_2985001 chr3L_2985001 RAL-907 1085 chr3L 3051723 3051751 chr3L 3051985 3052012 pogo 14 262 6.0 1.5 3.8 2.9 289 chr3L 3051723 3` UTR CG32485 + chr3L 3051868 intergenic CG32485 + chr3L 3052012 intergenic CG32485 + chr3L_14_3050001 chr3L_3050001 RAL-907 1086 chr3L 3104850 3104901 chr3L 3104952 3104974 6 96 1.0 3.5 2.2 1.9 124 chr3L 3104850 intron Cht7 - chr3L 3104912 intron Cht7 - chr3L 3104974 intron Cht7 - chr3L_6_3100001 chr3L_3100001 RAL-907 1087 chr3L 3259616 3259649 chr3L 3259717 3259731 7 101 4.0 4.5 4.2 1.3 115 chr3L 3259616 intron ckd + chr3L 3259674 intron ckd + chr3L 3259731 intron ckd + chr3L_7_3255001 chr3L_3255001 RAL-907 1088 chr3L 3281454 3281469 chr3L 3281935 3281980 Doc 8 504 2.5 4.0 3.2 1.9 526 chr3L 3281454 intron CG12017 + chr3L 3281717 intron CG12017 + chr3L 3281980 intron CG12017 + chr3L_8_3280001 chr3L_3280001 RAL-907 1089 chr3L 3317514 3317552 chr3L 3317613 3317651 17 98 0.0 5.5 2.8 4.5 137 chr3L 3317514 intergenic Drsl5 + chr3L 3317582 intergenic Drsl5 +,PIG-C - chr3L 3317651 intergenic PIG-C - chr3L_17_3315001 chr3L_3315001 RAL-907 1090 chr3L 3341244 3341298 chr3L 3341344 3341392 22 100 6.5 3.0 4.8 3.8 148 chr3L 3341244 intron kst + chr3L 3341318 intron kst + chr3L 3341392 intron kst + chr3L_22_3340001 chr3L_3340001 RAL-907 1091 chr3L 3436270 3436314 chr3L 3436369 3436413 17 99 1.0 3.5 2.2 5.3 143 chr3L 3436270 intron eIF5B - chr3L 3436342 intron eIF5B - chr3L 3436413 intron eIF5B - chr3L_17_3435001 chr3L_3435001 RAL-907 1092 chr3L 3475078 3475099 chr3L 3475528 3475563 jockey 4 458 1.0 1.0 1.0 2.0 485 chr3L 3475078 intron CG42324 + chr3L 3475320 intron CG42324 + chr3L 3475563 intron CG42324 + chr3L_4_3475001 chr3L_3475001 RAL-907 1093 chr3L 3484363 3484389 chr3L 3484558 3484581 8 195 2.0 2.5 2.2 2.5 218 chr3L 3484363 intron,exon CG42324 +,CG43074 - chr3L 3484472 intron,exon CG42324 +,CG43074 - chr3L 3484581 intron,exon CG42324 +,CG43074 - chr3L_8_3480001 chr3L_3480001 RAL-907 1094 chr3L 3539960 3539988 chr3L 3540049 3540097 6 106 0.5 0.0 0.2 5.0 137 chr3L 3539960 intron Eip63E + chr3L 3540028 intron Eip63E + chr3L 3540097 intron Eip63E + chr3L_6_3540001 chr3L_3540001 RAL-907 1095 chr3L 3573156 3573175 chr3L 3573253 3573257 7 96 6.5 2.5 4.5 1.3 101 chr3L 3573156 intron Eip63E + chr3L 3573206 intron Eip63E + chr3L 3573257 intron Eip63E + chr3L_7_3570001 chr3L_3570001 RAL-907 1096 chr3L 3601284 3601329 chr3L 3606615 3606661 copia 6 5328 3.0 1.0 2.0 2.0 5377 chr3L 3601284 intron Eip63E + chr3L 3603972 intron Eip63E + chr3L 3606661 intron Eip63E + chr3L_6_3600001 chr3L_3600001 RAL-907 1097 chr3L 3709444 3709454 chr3L 3709546 3709556 5 102 2.0 3.5 2.8 1.3 112 chr3L 3709444 intergenic CR45675 + chr3L 3709500 intergenic not near genes chr3L 3709556 intergenic not near genes chr3L_5_3705001 chr3L_3705001 RAL-907 1098 chr3L 3720956 3720974 chr3L 3721058 3721075 4 102 3.5 4.5 4.0 0.8 119 chr3L 3720956 intron CG32264 - chr3L 3721016 intron CG32264 - chr3L 3721075 intron CG32264 - chr3L_4_3720001 chr3L_3720001 RAL-907 1099 chr3L 3798019 3798072 chr3L 3798119 3798164 10 97 1.5 3.0 2.2 3.1 145 chr3L 3798019 intron CG32264 - chr3L 3798092 intron CG32264 - chr3L 3798164 intron CG32264 - chr3L_10_3795001 chr3L_3795001 RAL-907 1100 chr3L 3815035 3815081 chr3L 3815133 3815174 16 98 2.5 5.0 3.8 3.3 139 chr3L 3815035 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815104 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815174 intron,intron Scsalpha +,CR43932 - chr3L_16_3815001 chr3L_3815001 RAL-907 1101 chr3L 3873929 3873939 chr3L 3873992 3874040 4 80 1.5 4.0 2.8 1.1 111 chr3L 3873929 intergenic not near genes chr3L 3873984 intergenic not near genes chr3L 3874040 intergenic not near genes chr3L_4_3870001 chr3L_3870001 RAL-907 1102 chr3L 3889129 3889142 chr3L 3889227 3889245 7 102 0.0 4.0 2.0 2.3 116 chr3L 3889129 intergenic not near genes chr3L 3889187 intergenic not near genes chr3L 3889245 intergenic not near genes chr3L_7_3885001 chr3L_3885001 RAL-907 1103 chr3L 3914163 3914208 chr3L 3914267 3914307 7 103 3.5 3.0 3.2 1.7 144 chr3L 3914163 intron Eip63F-1 - chr3L 3914235 intron Eip63F-1 - chr3L 3914307 intron Eip63F-1 - chr3L_7_3910001 chr3L_3910001 RAL-907 1104 chr3L 3968035 3968052 chr3L 3968134 3968151 7 99 3.5 8.0 5.8 1.0 116 chr3L 3968035 intergenic not near genes chr3L 3968093 intergenic not near genes chr3L 3968151 intergenic not near genes chr3L_7_3965001 chr3L_3965001 RAL-907 1105 chr3L 4099464 4099488 chr3L 4099565 4099589 7 101 3.5 3.0 3.2 1.7 125 chr3L 4099464 intron CG14995 - chr3L 4099526 intron CG14995 - chr3L 4099589 intron CG14995 - chr3L_7_4095001 chr3L_4095001 RAL-907 1106 chr3L 4136454 4136468 chr3L 4142225 4142232 5 5765 33.5 12.5 23.0 0.2 5778 chr3L 4136454 3` UTR Rop - chr3L 4139343 intron Ras64B + chr3L 4142232 intergenic CG32260 +,Akh + chr3L_5_4135001 chr3L_4135001 RAL-907 1107 chr3L 4146802 4146837 chr3L 4146904 4146939 13 102 0.0 4.5 2.2 4.1 137 chr3L 4146802 intergenic not near genes chr3L 4146870 intergenic not near genes chr3L 4146939 intergenic not near genes chr3L_13_4145001 chr3L_4145001 RAL-907 1108 chr3L 4209813 4209843 chr3L 4209910 4209941 7 96 0.5 4.0 2.2 2.2 128 chr3L 4209813 intron CG43367 + chr3L 4209877 intron CG43367 + chr3L 4209941 intron CG43367 + chr3L_7_4205001 chr3L_4205001 RAL-907 1109 chr3L 4328717 4328762 chr3L 4336235 4336270 412 22 7514 4.0 2.5 3.2 5.2 7553 chr3L 4328717 intron Cip4 - chr3L 4332494 intron Cip4 - chr3L 4336270 exon Cip4 - chr3L_22_4330001 chr3L_4330001 RAL-907 1110 chr3L 4341330 4341332 chr3L 21448026 21448026 6 17106695 7.0 10.5 8.8 0.6 17106696 chr3L 4341330 intron Cip4 - chr3L 12894678 3` UTR CG14118 + chr3L 21448026 3` UTR Syx7 + chr3L_6_12890001 chr3L_12890001 RAL-907 1111 chr3L 4344869 4345066 chr3L 4344996 4345146 14 103 0.0 0.0 0.0 14.0 277 chr3L 4344869 intron Cip4 - chr3L 4345008 intron Cip4 - chr3L 4345146 intron Cip4 - chr3L_14_4345001 chr3L_4345001 RAL-907 1112 chr3L 4382292 4382335 chr3L 4382413 4382457 9 119 2.0 5.5 3.8 1.9 165 chr3L 4382292 intergenic not near genes chr3L 4382374 intergenic not near genes chr3L 4382457 intergenic not near genes chr3L_9_4380001 chr3L_4380001 RAL-907 1113 chr3L 4519405 4519446 chr3L 4519502 4519543 11 97 6.0 0.5 3.2 2.6 138 chr3L 4519405 intron Tie - chr3L 4519474 intron Tie - chr3L 4519543 intron Tie - chr3L_11_4515001 chr3L_4515001 RAL-907 1114 chr3L 4607252 4607290 chr3L 4607354 4607401 4 109 1.0 4.0 2.5 1.1 149 chr3L 4607252 intron Src64B - chr3L 4607326 intron Src64B - chr3L 4607401 intron Src64B - chr3L_4_4605001 chr3L_4605001 RAL-907 1115 chr3L 4901117 4901159 chr3L 4907322 4907369 diver 9 6208 4.0 3.0 3.5 2.0 6252 chr3L 4901117 intergenic CG13704 + chr3L 4904243 intergenic not near genes chr3L 4907369 intergenic not near genes chr3L_9_4900001 chr3L_4900001 RAL-907 1116 chr3L 5034144 5034190 chr3L 5043316 5043362 roo 16 9169 4.0 3.5 3.8 3.3 9218 chr3L 5034144 intron Con - chr3L 5038753 intron Con - chr3L 5043362 intron Con - chr3L_16_5035001 chr3L_5035001 RAL-907 1117 chr3L 5045449 5045459 chr3L 5050238 5050260 Doc 6 4799 7.5 4.0 5.8 0.9 4811 chr3L 5045449 intron Con - chr3L 5047854 intron Con - chr3L 5050260 intron Con - chr3L_6_5045001 chr3L_5045001 RAL-907 1118 chr3L 5045464 5045477 chr3L 5050235 5050278 Doc 10 4790 5.0 3.5 4.2 1.9 4814 chr3L 5045464 intron Con - chr3L 5047871 intron Con - chr3L 5050278 intron Con - chr3L_10_5045001 chr3L_5045001 RAL-907 1119 chr3L 5053213 5053254 chr3L 5053691 5053742 7 484 1.5 1.0 1.2 3.2 529 chr3L 5053213 intron Con - chr3L 5053478 intron Con - chr3L 5053742 intron Con - chr3L_7_5050001 chr3L_5050001 RAL-907 1120 chr3L 5066286 5066325 chr3L 5066405 5066444 9 118 4.5 2.5 3.5 2.0 158 chr3L 5066286 intron Con - chr3L 5066365 intron Con - chr3L 5066444 intron Con - chr3L_9_5065001 chr3L_5065001 RAL-907 1121 chr3L 5101180 5101229 chr3L 5101279 5101329 10 99 2.0 5.5 3.8 2.1 149 chr3L 5101180 intergenic not near genes chr3L 5101254 intergenic not near genes chr3L 5101329 intergenic not near genes chr3L_10_5100001 chr3L_5100001 RAL-907 1122 chr3L 5104466 5104505 chr3L 5124620 5124659 11 20152 4.5 2.0 3.2 2.6 20193 chr3L 5104466 intergenic not near genes chr3L 5114562 intergenic not near genes chr3L 5124659 intergenic not near genes chr3L_11_5110001 chr3L_5110001 RAL-907 1123 chr3L 5130908 5130945 chr3L 5131031 5131068 11 121 3.5 2.0 2.8 2.9 160 chr3L 5130908 intergenic not near genes chr3L 5130988 intergenic not near genes chr3L 5131068 intergenic CG15212 + chr3L_11_5130001 chr3L_5130001 RAL-907 1124 chr3L 5164620 5164667 chr3L 5164716 5164763 10 93 2.5 0.0 1.2 4.5 143 chr3L 5164620 intron shep - chr3L 5164692 intron shep - chr3L 5164763 intron shep - chr3L_10_5160001 chr3L_5160001 RAL-907 1125 chr3L 5188782 5188825 chr3L 5189553 5189596 18 769 4.0 8.5 6.2 2.5 814 chr3L 5188782 intron shep - chr3L 5189189 intron shep - chr3L 5189596 intron shep - chr3L_18_5185001 chr3L_5185001 RAL-907 1126 chr3L 5203081 5203116 chr3L 5203206 5203241 18 125 3.0 2.0 2.5 5.1 160 chr3L 5203081 intron shep - chr3L 5203161 intron shep - chr3L 5203241 intron shep - chr3L_18_5200001 chr3L_5200001 RAL-907 1127 chr3L 5248980 5249006 chr3L 5249084 5249110 10 104 0.0 4.5 2.2 3.1 130 chr3L 5248980 intron shep - chr3L 5249045 intron shep - chr3L 5249110 intron shep - chr3L_10_5245001 chr3L_5245001 RAL-907 1128 chr3L 5261146 5261175 chr3L 5261245 5261274 12 99 5.5 4.0 4.8 2.1 128 chr3L 5261146 intron shep - chr3L 5261210 intron shep - chr3L 5261274 intron shep - chr3L_12_5260001 chr3L_5260001 RAL-907 1129 chr3L 5299155 5299170 chr3L 5306600 5306616 Quasimodo 9 7446 1.5 0.0 0.8 5.0 7461 chr3L 5299155 intergenic not near genes chr3L 5302886 intergenic not near genes chr3L 5306616 intergenic not near genes chr3L_9_5300001 chr3L_5300001 RAL-907 1130 chr3L 5349364 5349408 chr3L 5349606 5349650 11 242 26.5 29.0 27.8 0.4 286 chr3L 5349364 intron lama - chr3L 5349507 intron lama - chr3L 5349650 intron lama - chr3L_11_5345001 chr3L_5345001 RAL-907 1131 chr3L 5393461 5393464 chr3L 5393643 5393646 4 182 4.0 0.0 2.0 1.3 185 chr3L 5393461 intergenic not near genes chr3L 5393554 intergenic not near genes chr3L 5393646 intergenic not near genes chr3L_4_5390001 chr3L_5390001 RAL-907 1132 chr3L 5427339 5427378 chr3L 5427964 5428003 20 625 7.0 4.0 5.5 3.1 664 chr3L 5427339 intron CG34391 + chr3L 5427671 intron CG34391 + chr3L 5428003 intron CG34391 + chr3L_20_5425001 chr3L_5425001 RAL-907 1133 chr3L 5482946 5483081 chr3L 5483155 5483203 5 146 2.0 3.0 2.5 1.4 257 chr3L 5482946 exon CG4835 + chr3L 5483074 exon CG4835 + chr3L 5483203 exon CG4835 + chr3L_5_5480001 chr3L_5480001 RAL-907 1134 chr3L 5521473 5521522 chr3L 5521582 5521631 9 104 6.0 4.0 5.0 1.5 158 chr3L 5521473 intron Lkr - chr3L 5521552 intron Lkr - chr3L 5521631 intron Lkr - chr3L_9_5520001 chr3L_5520001 RAL-907 1135 chr3L 5537715 5537725 chr3L 5538077 5538087 jockey 4 362 4.5 8.0 6.2 0.6 372 chr3L 5537715 intergenic not near genes chr3L 5537901 intergenic not near genes chr3L 5538087 intergenic CG10625 - chr3L_4_5535001 chr3L_5535001 RAL-907 1136 chr3L 5537739 5537752 chr3L 5538060 5538114 jockey 4 352 2.0 4.5 3.2 1.0 375 chr3L 5537739 intergenic not near genes chr3L 5537926 intergenic CG10625 - chr3L 5538114 intergenic CG10625 - chr3L_4_5535001 chr3L_5535001 RAL-907 1137 chr3L 5561643 5561698 chr3L 5561745 5561800 9 102 3.0 2.5 2.8 2.4 157 chr3L 5561643 intergenic sinu -,Sucb - chr3L 5561722 3` UTR Sucb - chr3L 5561800 3` UTR Sucb - chr3L_9_5560001 chr3L_5560001 RAL-907 1138 chr3L 5597812 5597830 chr3L 5597912 5597930 6 100 3.0 1.0 2.0 2.0 118 chr3L 5597812 intergenic CG5150 + chr3L 5597871 intergenic CG5150 + chr3L 5597930 intergenic not near genes chr3L_6_5595001 chr3L_5595001 RAL-907 1139 chr3L 5726869 5726883 chr3L 5726996 5727010 4 127 7.0 3.5 5.2 0.6 141 chr3L 5726869 intron sif + chr3L 5726940 intron sif + chr3L 5727010 intron sif + chr3L_4_5725001 chr3L_5725001 RAL-907 1140 chr3L 5910017 5910062 chr3L 5910273 5910323 pogo 16 260 6.5 2.0 4.2 3.1 306 chr3L 5910017 intron CG13288 + chr3L 5910170 intron CG13288 + chr3L 5910323 intron CG13288 + chr3L_16_5910001 chr3L_5910001 RAL-907 1141 chr3L 5926324 5926349 chr3L 5926506 5926511 BS 8 182 4.5 6.0 5.2 1.3 187 chr3L 5926324 intron Vap-33B + chr3L 5926418 intron Vap-33B + chr3L 5926511 intron Vap-33B + chr3L_8_5925001 chr3L_5925001 RAL-907 1142 chr3L 5940082 5940109 chr3L 5940175 5940221 9 98 4.0 2.0 3.0 2.2 139 chr3L 5940082 intron CG33993 - chr3L 5940152 intron CG33993 - chr3L 5940221 intron CG33993 - chr3L_9_5940001 chr3L_5940001 RAL-907 1143 chr3L 6001664 6001714 chr3L 6004384 6004434 jockey 14 2719 1.0 3.0 2.0 4.7 2770 chr3L 6001664 intron PVRAP + chr3L 6003049 intron PVRAP + chr3L 6004434 intron PVRAP + chr3L_14_6000001 chr3L_6000001 RAL-907 1144 chr3L 6028353 6028402 chr3L 6028471 6028515 4 109 2.5 2.5 2.5 1.1 162 chr3L 6028353 intergenic not near genes chr3L 6028434 intergenic not near genes chr3L 6028515 intergenic not near genes chr3L_4_6025001 chr3L_6025001 RAL-907 1145 chr3L 6040353 6040393 chr3L 6042729 6042769 Doc 12 2376 2.5 7.5 5.0 2.0 2416 chr3L 6040353 intergenic Jon65Aiv + chr3L 6041561 intergenic not near genes chr3L 6042769 intergenic not near genes chr3L_12_6040001 chr3L_6040001 RAL-907 1146 chr3L 6142493 6142532 chr3L 6142724 6142760 9 230 3.0 1.5 2.2 2.8 267 chr3L 6142493 intergenic Cpr65Aw - chr3L 6142626 intergenic Cpr65Aw - chr3L 6142760 intergenic Cpr65Aw - chr3L_9_6140001 chr3L_6140001 RAL-907 1147 chr3L 6220902 6220945 chr3L 6230067 6230117 roo 10 9168 5.5 5.0 5.2 1.6 9215 chr3L 6220902 5` UTR pncr008:3L + chr3L 6225510 intergenic not near genes chr3L 6230117 intergenic not near genes chr3L_10_6225001 chr3L_6225001 RAL-907 1148 chr3L 6233295 6233324 chr3L 6233436 6233465 5 141 2.0 3.5 2.8 1.3 170 chr3L 6233295 intron BG642312 - chr3L 6233380 5` UTR BG642312 - chr3L 6233465 intergenic CG42714 -,BG642312 - chr3L_5_6230001 chr3L_6230001 RAL-907 1149 chr3L 6335005 6335039 chr3L 6335481 6335530 297 9 486 4.5 2.5 3.5 2.0 525 chr3L 6335005 intron CG13300 - chr3L 6335268 intron CG13300 - chr3L 6335530 intron CG13300 - chr3L_9_6335001 chr3L_6335001 RAL-907 1150 chr3L 6405642 6405687 chr3L 6432126 6432171 roo 16 26484 6.0 6.5 6.2 2.2 26529 chr3L 6405642 intron CG42747 + chr3L 6418906 intron CG42747 + chr3L 6432171 intron CG42747 + chr3L_16_6415001 chr3L_6415001 RAL-907 1151 chr3L 6642855 6642879 chr3L 6642955 6642979 6 100 4.5 0.0 2.2 1.9 124 chr3L 6642855 intergenic CR45239 + chr3L 6642917 intergenic CR45239 + chr3L 6642979 intergenic CR45239 + chr3L_6_6640001 chr3L_6640001 RAL-907 1152 chr3L 6665822 6665842 chr3L 6665926 6665952 4 110 3.5 6.5 5.0 0.7 130 chr3L 6665822 intergenic CR45173 -,eIF4E-4 - chr3L 6665887 intergenic CR45173 -,eIF4E-4 - chr3L 6665952 intergenic CR45173 -,eIF4E-4 - chr3L_4_6665001 chr3L_6665001 RAL-907 1153 chr3L 6781105 6781153 chr3L 6783138 6783183 Doc 15 2032 6.0 0.0 3.0 3.8 2078 chr3L 6781105 intergenic not near genes chr3L 6782144 intergenic not near genes chr3L 6783183 intergenic not near genes chr3L_15_6780001 chr3L_6780001 RAL-907 1154 chr3L 6855916 6855951 chr3L 6860720 6860753 Doc 8 4801 1.0 0.5 0.8 4.4 4837 chr3L 6855916 intergenic not near genes chr3L 6858334 intergenic not near genes chr3L 6860753 intergenic not near genes chr3L_8_6855001 chr3L_6855001 RAL-907 1155 chr3L 6868698 6868742 chr3L 6868796 6868840 15 98 0.0 3.5 1.8 5.4 142 chr3L 6868698 intergenic not near genes chr3L 6868769 intergenic not near genes chr3L 6868840 intergenic not near genes chr3L_15_6865001 chr3L_6865001 RAL-907 1156 chr3L 6887497 6887546 chr3L 6895009 6895038 roo 11 7506 6.5 9.5 8.0 1.2 7541 chr3L 6887497 intergenic not near genes chr3L 6891268 intergenic not near genes chr3L 6895038 intergenic not near genes chr3L_11_6890001 chr3L_6890001 RAL-907 1157 chr3L 6934318 6934361 chr3L 6934449 6934492 16 131 2.0 3.5 2.8 4.2 174 chr3L 6934318 exon CG14820 + chr3L 6934405 intron CG14820 + chr3L 6934492 exon CG14820 + chr3L_16_6930001 chr3L_6930001 RAL-907 1158 chr3L 6955769 6955812 chr3L 6955869 6955886 9 95 3.5 2.5 3.0 2.2 117 chr3L 6955769 5` UTR CG10077 - chr3L 6955828 5` UTR CG10077 - chr3L 6955886 5` UTR CG10077 - chr3L_9_6955001 chr3L_6955001 RAL-907 1159 chr3L 6990710 6990749 chr3L 6990808 6990849 7 95 3.0 4.0 3.5 1.6 139 chr3L 6990710 5` UTR bin + chr3L 6990780 5` UTR bin + chr3L 6990849 exon bin + chr3L_7_6990001 chr3L_6990001 RAL-907 1160 chr3L 6994876 6994916 chr3L 6995507 6995547 BS 5 631 0.0 1.0 0.5 3.3 671 chr3L 6994876 intergenic bin + chr3L 6995212 intergenic not near genes chr3L 6995547 intergenic not near genes chr3L_5_6995001 chr3L_6995001 RAL-907 1161 chr3L 7013439 7013473 chr3L 7013547 7013596 8 121 3.5 0.0 1.8 2.9 157 chr3L 7013439 intron Mp + chr3L 7013518 intron Mp + chr3L 7013596 intron Mp + chr3L_8_7010001 chr3L_7010001 RAL-907 1162 chr3L 7086820 7086835 chr3L 7086919 7086926 5 97 5.0 0.0 2.5 1.4 106 chr3L 7086820 intergenic Cpr65Ea - chr3L 7086873 intergenic Cpr65Ea - chr3L 7086926 intergenic Cpr65Ea - chr3L_5_7085001 chr3L_7085001 RAL-907 1163 chr3L 7090007 7090049 chr3L 7090108 7090149 9 101 1.5 1.0 1.2 4.1 142 chr3L 7090007 intergenic not near genes chr3L 7090078 intergenic not near genes chr3L 7090149 intergenic not near genes chr3L_9_7090001 chr3L_7090001 RAL-907 1164 chr3L 7112565 7112610 chr3L 7112672 7112717 11 105 5.5 2.5 4.0 2.2 152 chr3L 7112565 intron form3 + chr3L 7112641 intron form3 + chr3L 7112717 intron form3 + chr3L_11_7110001 chr3L_7110001 RAL-907 1165 chr3L 7150866 7150900 chr3L 7150962 7150995 6 96 3.5 2.5 3.0 1.5 129 chr3L 7150866 intron corn - chr3L 7150930 intron corn - chr3L 7150995 intron corn - chr3L_6_7150001 chr3L_7150001 RAL-907 1166 chr3L 7175635 7175667 chr3L 7175906 7175937 8 266 3.0 2.5 2.8 2.1 302 chr3L 7175635 intron Dscam2 - chr3L 7175786 intron Dscam2 - chr3L 7175937 intron Dscam2 - chr3L_8_7175001 chr3L_7175001 RAL-907 1167 chr3L 7187383 7187415 chr3L 7187485 7187517 13 98 0.0 0.0 0.0 13.0 134 chr3L 7187383 intron Dscam2 - chr3L 7187450 intron Dscam2 - chr3L 7187517 intron Dscam2 - chr3L_13_7185001 chr3L_7185001 RAL-907 1168 chr3L 7258910 7258932 chr3L 7259070 7259092 5 160 1.5 2.5 2.0 1.7 182 chr3L 7258910 intron CG14830 - chr3L 7259001 intron CG14830 - chr3L 7259092 intron CG14830 - chr3L_5_7255001 chr3L_7255001 RAL-907 1169 chr3L 7276187 7276240 chr3L 7276291 7276343 16 103 4.5 4.5 4.5 2.9 156 chr3L 7276187 intron unc-13-4A - chr3L 7276265 intron unc-13-4A - chr3L 7276343 intron unc-13-4A - chr3L_16_7275001 chr3L_7275001 RAL-907 1170 chr3L 7377294 7377339 chr3L 7380419 7380459 297 13 3122 7.5 3.5 5.5 2.0 3165 chr3L 7377294 intron SMSr - chr3L 7378876 intron SMSr - chr3L 7380459 intron SMSr - chr3L_13_7375001 chr3L_7375001 RAL-907 1171 chr3L 7425985 7426041 chr3L 7426387 7426442 20 399 2.0 2.0 2.0 6.7 457 chr3L 7425985 intron CG42458 + chr3L 7426214 intron CG42458 + chr3L 7426442 intron CG42458 + chr3L_20_7425001 chr3L_7425001 RAL-907 1172 chr3L 7450682 7450692 chr3L 7450785 7450795 7 103 8.5 4.0 6.2 1.0 113 chr3L 7450682 intron CG42458 + chr3L 7450738 intron CG42458 + chr3L 7450795 intron CG42458 + chr3L_7_7450001 chr3L_7450001 RAL-907 1173 chr3L 7450693 7450716 chr3L 7450771 7450816 5 96 4.5 2.5 3.5 1.1 123 chr3L 7450693 intron CG42458 + chr3L 7450754 intron CG42458 + chr3L 7450816 intron CG42458 + chr3L_5_7450001 chr3L_7450001 RAL-907 1174 chr3L 7462965 7462986 chr3L 7463064 7463085 8 99 1.5 2.5 2.0 2.7 120 chr3L 7462965 intergenic not near genes chr3L 7463025 intergenic not near genes chr3L 7463085 intergenic not near genes chr3L_8_7460001 chr3L_7460001 RAL-907 1175 chr3L 7498750 7498790 chr3L 7503546 7503570 F-element 12 4795 7.5 9.5 8.5 1.3 4820 chr3L 7498750 5` UTR CG8539 - chr3L 7501160 intergenic not near genes chr3L 7503570 intergenic not near genes chr3L_12_7500001 chr3L_7500001 RAL-907 1176 chr3L 7505396 7505443 chr3L 7505492 7505539 12 95 1.5 4.5 3.0 3.0 143 chr3L 7505396 intergenic CG7548 - chr3L 7505468 intergenic CG7548 - chr3L 7505539 3` UTR CG7548 - chr3L_12_7505001 chr3L_7505001 RAL-907 1177 chr3L 7527512 7527567 chr3L 7527616 7527635 6 96 0.0 1.0 0.5 4.0 123 chr3L 7527512 3` UTR ltl + chr3L 7527574 3` UTR ltl + chr3L 7527635 3` UTR ltl + chr3L_6_7525001 chr3L_7525001 RAL-907 1178 chr3L 7711973 7712007 chr3L 7712085 7712119 6 112 6.5 0.0 3.2 1.4 146 chr3L 7711973 intron,intron CG32373 +,Ank2 - chr3L 7712046 intron,intron CG32373 +,Ank2 - chr3L 7712119 intron,intron CG32373 +,Ank2 - chr3L_6_7710001 chr3L_7710001 RAL-907 1179 chr3L 7715128 7715150 chr3L 7715298 7715312 5 164 2.0 3.5 2.8 1.3 184 chr3L 7715128 intron,intron CG32373 +,Ank2 - chr3L 7715220 intron,intron CG32373 +,Ank2 - chr3L 7715312 intron,intron CG32373 +,Ank2 - chr3L_5_7715001 chr3L_7715001 RAL-907 1180 chr3L 7793702 7793742 chr3L 7800774 7800814 297 12 7072 4.5 2.5 3.5 2.7 7112 chr3L 7793702 intron CG32369 - chr3L 7797258 intron CG32369 - chr3L 7800814 intron CG32369 - chr3L_12_7795001 chr3L_7795001 RAL-907 1181 chr3L 7806126 7806142 chr3L 7806229 7806245 5 103 6.0 0.0 3.0 1.2 119 chr3L 7806126 intron CG32369 - chr3L 7806186 intron CG32369 - chr3L 7806245 intron CG32369 - chr3L_5_7805001 chr3L_7805001 RAL-907 1182 chr3L 7843144 7843156 chr3L 7843256 7843268 4 112 3.0 1.0 2.0 1.3 124 chr3L 7843144 intron Pdp1 - chr3L 7843206 intron Pdp1 - chr3L 7843268 intron Pdp1 - chr3L_4_7840001 chr3L_7840001 RAL-907 1183 chr3L 7886521 7886547 chr3L 7889059 7889086 Stalker4 5 2536 0.0 3.0 1.5 2.0 2565 chr3L 7886521 intron CG32365 + chr3L 7887804 intron CG32365 + chr3L 7889086 intron CG32365 + chr3L_5_7885001 chr3L_7885001 RAL-907 1184 chr3L 7916826 7916859 chr3L 7926002 7926050 roo 7 9188 5.5 3.0 4.2 1.3 9224 chr3L 7916826 3` UTR syd - chr3L 7921438 intron syd - chr3L 7926050 3` UTR syd - chr3L_7_7920001 chr3L_7920001 RAL-907 1185 chr3L 7985370 7985389 chr3L 7987719 7987733 NOF 8 2348 3.5 4.0 3.8 1.7 2363 chr3L 7985370 intron nmo + chr3L 7986552 intron nmo + chr3L 7987733 intron nmo + chr3L_8_7985001 chr3L_7985001 RAL-907 1186 chr3L 8026578 8026607 chr3L 8026676 8026705 9 98 7.5 3.0 5.2 1.5 127 chr3L 8026578 intron nmo + chr3L 8026642 intron nmo + chr3L 8026705 intron nmo + chr3L_9_8025001 chr3L_8025001 RAL-907 1187 chr3L 8178501 8178531 chr3L 8178597 8178603 9 94 1.0 0.0 0.5 6.0 102 chr3L 8178501 intergenic Nmt -,mthl7 - chr3L 8178552 intergenic mthl7 -,Nmt - chr3L 8178603 intergenic mthl7 -,Nmt - chr3L_9_8175001 chr3L_8175001 RAL-907 1188 chr3L 8208128 8208153 chr3L 8208279 8208301 6 145 1.5 4.0 2.8 1.6 173 chr3L 8208128 intergenic not near genes chr3L 8208214 intergenic not near genes chr3L 8208301 intergenic not near genes chr3L_6_8205001 chr3L_8205001 RAL-907 1189 chr3L 8226695 8226720 chr3L 8226814 8226839 7 119 6.5 0.0 3.2 1.7 144 chr3L 8226695 intergenic not near genes chr3L 8226767 intergenic not near genes chr3L 8226839 intergenic not near genes chr3L_7_8225001 chr3L_8225001 RAL-907 1190 chr3L 8226729 8226734 chr3L 8226848 8226853 5 119 5.5 0.0 2.8 1.3 124 chr3L 8226729 intergenic not near genes chr3L 8226791 intergenic not near genes chr3L 8226853 intergenic not near genes chr3L_5_8225001 chr3L_8225001 RAL-907 1191 chr3L 8295798 8295826 chr3L 8295971 8296002 11 175 4.5 6.0 5.2 1.8 204 chr3L 8295798 intergenic CG7201 - chr3L 8295900 intergenic not near genes chr3L 8296002 intergenic not near genes chr3L_11_8295001 chr3L_8295001 RAL-907 1192 chr3L 8395833 8395869 chr3L 8395936 8395966 6 92 2.5 2.0 2.2 1.9 133 chr3L 8395833 intergenic CG7120 + chr3L 8395900 intergenic CG7120 + chr3L 8395966 intergenic CG7120 + chr3L_6_8395001 chr3L_8395001 RAL-907 1193 chr3L 8498286 8498326 chr3L 8505767 8505813 blood 6 7485 2.5 5.5 4.0 1.2 7527 chr3L 8498286 intron CG43163 - chr3L 8502050 intron CG43163 - chr3L 8505813 intron CG43163 - chr3L_6_8500001 chr3L_8500001 RAL-907 1194 chr3L 8791260 8791306 chr3L 8796700 8796745 I-element 7 5439 1.5 0.0 0.8 3.9 5485 chr3L 8791260 exon Fhos + chr3L 8794002 intron Fhos + chr3L 8796745 intron Fhos + chr3L_7_8790001 chr3L_8790001 RAL-907 1195 chr3L 8849195 8849243 chr3L 8849295 8849308 9 89 5.0 1.0 3.0 2.2 113 chr3L 8849195 intron dally + chr3L 8849252 intron dally + chr3L 8849308 intron dally + chr3L_9_8845001 chr3L_8845001 RAL-907 1196 chr3L 8861516 8861553 chr3L 8861627 8861664 12 106 1.0 3.0 2.0 4.0 148 chr3L 8861516 intron dally + chr3L 8861590 intron dally + chr3L 8861664 intron dally + chr3L_12_8860001 chr3L_8860001 RAL-907 1197 chr3L 8884415 8884422 chr3L 8884622 8884641 6 211 4.5 0.5 2.5 1.7 226 chr3L 8884415 intron dally + chr3L 8884528 intron dally + chr3L 8884641 intron dally + chr3L_6_8880001 chr3L_8880001 RAL-907 1198 chr3L 9076906 9076955 chr3L 9084486 9084529 412 15 7574 2.5 4.0 3.2 3.6 7623 chr3L 9076906 exon Tequila + chr3L 9080718 intron Tequila + chr3L 9084529 exon Tequila + chr3L_15_9080001 chr3L_9080001 RAL-907 1199 chr3L 7750128 7750129 chr3L 9107470 9107483 4 1357345 18.5 0.0 9.2 0.4 1357355 chr3L 7750128 intron,3` UTR CG32373 +,CG13685 + chr3L 8428806 intron Cbl + chr3L 9107483 intron bol - chr3L_4_8425001 chr3L_8425001 RAL-907 1200 chr3L 9130558 9130579 chr3L 9134339 9134356 412 4 3778 6.5 8.5 7.5 0.5 3798 chr3L 9130558 intergenic bol - chr3L 9132457 intergenic not near genes chr3L 9134356 intergenic Dhpr + chr3L_4_9130001 chr3L_9130001 RAL-907 1201 chr3L 9270598 9270635 chr3L 9278373 9278399 roo 6 7771 6.0 2.5 4.2 1.2 7801 chr3L 9270598 intron GluRIB + chr3L 9274498 intron GluRIB + chr3L 9278399 exon GluRIB + chr3L_6_9270001 chr3L_9270001 RAL-907 1202 chr3L 9347374 9347410 chr3L 9347471 9347507 7 96 0.5 3.0 1.8 2.5 133 chr3L 9347374 intron PGRP-LC + chr3L 9347440 intron PGRP-LC + chr3L 9347507 intron PGRP-LC + chr3L_7_9345001 chr3L_9345001 RAL-907 1203 chr3L 9348446 9348705 chr3L 9348968 9349085 9 505 0.0 0.5 0.2 7.5 639 chr3L 9348446 intergenic PGRP-LC + chr3L 9348766 intergenic PGRP-LC + chr3L 9349085 intergenic not near genes chr3L_9_9345001 chr3L_9345001 RAL-907 1204 chr3L 9359579 9359615 chr3L 9359690 9359726 8 111 3.5 6.5 5.0 1.3 147 chr3L 9359579 3` UTR CG32039 + chr3L 9359652 3` UTR CG32039 + chr3L 9359726 3` UTR CG32039 + chr3L_8_9355001 chr3L_9355001 RAL-907 1205 chr3L 9498179 9498229 chr3L 9498276 9498324 9 96 5.0 3.0 4.0 1.8 145 chr3L 9498179 intron path - chr3L 9498252 intron path - chr3L 9498324 intron path - chr3L_9_9495001 chr3L_9495001 RAL-907 1206 chr3L 9501689 9501733 chr3L 9502195 9502217 roo 5 502 3.5 0.0 1.8 1.8 528 chr3L 9501689 intron path - chr3L 9501953 intron path - chr3L 9502217 intron path - chr3L_5_9500001 chr3L_9500001 RAL-907 1207 chr3L 9503448 9503461 chr3L 9503557 9503570 7 109 4.5 10.0 7.2 0.9 122 chr3L 9503448 intron path - chr3L 9503509 intron path - chr3L 9503570 intron path - chr3L_7_9500001 chr3L_9500001 RAL-907 1208 chr3L 9571881 9571885 chr3L 9572249 9572252 jockey 4 368 6.5 0.0 3.2 1.0 371 chr3L 9571881 intron CG42673 + chr3L 9572066 intron CG42673 + chr3L 9572252 intron CG42673 + chr3L_4_9570001 chr3L_9570001 RAL-907 1209 chr3L 9571886 9571904 chr3L 9572248 9572272 jockey 6 365 5.0 0.0 2.5 1.7 386 chr3L 9571886 intron CG42673 + chr3L 9572079 intron CG42673 + chr3L 9572272 intron CG42673 + chr3L_6_9570001 chr3L_9570001 RAL-907 1210 chr3L 9575897 9575938 chr3L 9580995 9581037 jockey 5 5090 5.0 6.0 5.5 0.8 5140 chr3L 9575897 intron CG42673 + chr3L 9578467 intron CG42673 + chr3L 9581037 intron CG42673 + chr3L_5_9575001 chr3L_9575001 RAL-907 1211 chr3L 9637834 9637887 chr3L 9637936 9637989 26 100 2.0 4.5 3.2 6.2 155 chr3L 9637834 intron fry - chr3L 9637912 intron fry - chr3L 9637989 intron fry - chr3L_26_9635001 chr3L_9635001 RAL-907 1212 chr3L 9639008 9639061 chr3L 9639113 9639166 4 105 0.0 2.0 1.0 2.0 158 chr3L 9639008 intron,3` UTR fry -,CG8329 + chr3L 9639087 intron fry - chr3L 9639166 intron fry - chr3L_4_9635001 chr3L_9635001 RAL-907 1213 chr3L 9652781 9652817 chr3L 9653012 9653049 11 231 4.5 4.5 4.5 2.0 268 chr3L 9652781 intron,intron fry -,CG33696 + chr3L 9652915 intron,intron fry -,CG33696 + chr3L 9653049 intron,intron fry -,CG33696 + chr3L_11_9650001 chr3L_9650001 RAL-907 1214 chr3L 9966814 9966831 chr3L 9970308 9970320 7 3491 27.5 21.5 24.5 0.3 3506 chr3L 9966814 3` UTR,3` UTR CG34356 +,CG6685 - chr3L 9968567 5` UTR Nc + chr3L 9970320 exon Nc + chr3L_7_9965001 chr3L_9965001 RAL-907 1215 chr3L 9990485 9990527 chr3L 9990599 9990631 4 109 5.5 0.5 3.0 1.0 146 chr3L 9990485 intron dpr6 + chr3L 9990558 intron dpr6 + chr3L 9990631 intron dpr6 + chr3L_4_9990001 chr3L_9990001 RAL-907 1216 chr3L 9994086 9994103 chr3L 9994188 9994207 4 104 1.0 1.0 1.0 2.0 121 chr3L 9994086 intron dpr6 + chr3L 9994146 intron dpr6 + chr3L 9994207 intron dpr6 + chr3L_4_9990001 chr3L_9990001 RAL-907 1217 chr3L 10004100 10004114 chr3L 10004200 10004213 9 100 0.5 7.0 3.8 1.9 113 chr3L 10004100 exon dpr6 + chr3L 10004156 intron dpr6 + chr3L 10004213 intron dpr6 + chr3L_9_10000001 chr3L_10000001 RAL-907 1218 chr3L 10011575 10011610 chr3L 10011674 10011712 6 100 6.0 2.0 4.0 1.2 137 chr3L 10011575 intron dpr6 + chr3L 10011644 intron dpr6 + chr3L 10011712 intron dpr6 + chr3L_6_10010001 chr3L_10010001 RAL-907 1219 chr3L 10165647 10165652 chr3L 10165743 10165748 4 95 6.0 0.0 3.0 1.0 101 chr3L 10165647 intron dpr10 - chr3L 10165698 intron dpr10 - chr3L 10165748 intron dpr10 - chr3L_4_10165001 chr3L_10165001 RAL-907 1220 chr3L 10204062 10204087 chr3L 10204219 10204247 10 159 7.0 1.0 4.0 2.0 185 chr3L 10204062 intergenic not near genes chr3L 10204154 intergenic not near genes chr3L 10204247 intergenic not near genes chr3L_10_10200001 chr3L_10200001 RAL-907 1221 chr3L 10214794 10214829 chr3L 10214916 10214951 13 120 2.5 3.5 3.0 3.2 157 chr3L 10214794 intergenic not near genes chr3L 10214872 intergenic not near genes chr3L 10214951 intergenic not near genes chr3L_13_10210001 chr3L_10210001 RAL-907 1222 chr3L 10281697 10281736 chr3L 10281835 10281869 6 134 3.5 1.5 2.5 1.7 172 chr3L 10281697 intergenic not near genes chr3L 10281783 intergenic not near genes chr3L 10281869 intergenic not near genes chr3L_6_10280001 chr3L_10280001 RAL-907 1223 chr3L 10298649 10298699 chr3L 10298756 10298806 17 107 0.0 1.5 0.8 9.4 157 chr3L 10298649 intergenic not near genes chr3L 10298728 intergenic not near genes chr3L 10298806 intergenic not near genes chr3L_17_10295001 chr3L_10295001 RAL-907 1224 chr3L 10308733 10308773 chr3L 10308830 10308869 9 94 2.0 4.0 3.0 2.2 136 chr3L 10308733 intergenic not near genes chr3L 10308801 intergenic not near genes chr3L 10308869 intergenic not near genes chr3L_9_10305001 chr3L_10305001 RAL-907 1225 chr3L 10328096 10328126 chr3L 10328228 10328248 10 131 4.5 5.5 5.0 1.7 152 chr3L 10328096 intergenic not near genes chr3L 10328172 intergenic not near genes chr3L 10328248 intergenic not near genes chr3L_10_10325001 chr3L_10325001 RAL-907 1226 chr3L 10383192 10383243 chr3L 10383311 10383362 9 119 3.5 4.0 3.8 1.9 170 chr3L 10383192 intergenic not near genes chr3L 10383277 intergenic not near genes chr3L 10383362 intergenic not near genes chr3L_9_10380001 chr3L_10380001 RAL-907 1227 chr3L 10390232 10390266 chr3L 10390344 10390378 10 112 3.5 6.5 5.0 1.7 146 chr3L 10390232 intergenic not near genes chr3L 10390305 intergenic not near genes chr3L 10390378 intergenic not near genes chr3L_10_10390001 chr3L_10390001 RAL-907 1228 chr3L 10414941 10414977 chr3L 10417313 10417324 Doc 8 2378 0.0 1.0 0.5 5.3 2383 chr3L 10414941 intergenic CG12362 + chr3L 10416132 intergenic not near genes chr3L 10417324 intergenic not near genes chr3L_8_10415001 chr3L_10415001 RAL-907 1229 chr3L 10417579 10417603 chr3L 10417650 10417687 7 81 3.5 2.0 2.8 1.8 108 chr3L 10417579 intergenic not near genes chr3L 10417633 intergenic not near genes chr3L 10417687 intergenic not near genes chr3L_7_10415001 chr3L_10415001 RAL-907 1230 chr3L 10459690 10459742 chr3L 10459794 10459846 19 101 4.0 3.5 3.8 4.0 156 chr3L 10459690 3` UTR Gem3 - chr3L 10459768 3` UTR Gem3 - chr3L 10459846 3` UTR Gem3 - chr3L_19_10455001 chr3L_10455001 RAL-907 1231 chr3L 10584262 10584301 chr3L 10584369 10584408 20 106 7.0 3.5 5.2 3.2 146 chr3L 10584262 intron A2bp1 + chr3L 10584335 intron A2bp1 + chr3L 10584408 intron A2bp1 + chr3L_20_10580001 chr3L_10580001 RAL-907 1232 chr3L 10600440 10600474 chr3L 10600542 10600576 9 102 3.0 1.0 2.0 3.0 136 chr3L 10600440 intergenic not near genes chr3L 10600508 intergenic not near genes chr3L 10600576 intergenic not near genes chr3L_9_10600001 chr3L_10600001 RAL-907 1233 chr3L 10614748 10614798 chr3L 10614855 10614897 12 101 0.0 3.5 1.8 4.3 149 chr3L 10614748 intergenic not near genes chr3L 10614822 intergenic not near genes chr3L 10614897 intergenic not near genes chr3L_12_10610001 chr3L_10610001 RAL-907 1234 chr3L 10621828 10621845 chr3L 10621935 10621952 10 106 9.5 2.5 6.0 1.4 124 chr3L 10621828 intergenic not near genes chr3L 10621890 intergenic not near genes chr3L 10621952 intergenic not near genes chr3L_10_10620001 chr3L_10620001 RAL-907 1235 chr3L 10621846 10621879 chr3L 10621933 10621986 10 104 4.5 2.0 3.2 2.4 140 chr3L 10621846 intergenic not near genes chr3L 10621916 intergenic not near genes chr3L 10621986 intergenic not near genes chr3L_10_10620001 chr3L_10620001 RAL-907 1236 chr3L 10647690 10647735 chr3L 10647810 10647855 12 118 6.0 3.5 4.8 2.1 165 chr3L 10647690 intron CG32066 - chr3L 10647772 intron CG32066 - chr3L 10647855 intron CG32066 - chr3L_12_10645001 chr3L_10645001 RAL-907 1237 chr3L 10658064 10658197 chr3L 10658161 10658344 24 128 0.0 0.0 0.0 24.0 280 chr3L 10658064 intron CG32066 - chr3L 10658204 intron CG32066 - chr3L 10658344 intron CG32066 - chr3L_24_10655001 chr3L_10655001 RAL-907 1238 chr3L 10735799 10735803 chr3L 24766918 24766922 4 14031119 7.0 7.5 7.2 0.5 14031123 chr3L 10735799 intergenic not near genes chr3L 17751360 intergenic Adgf-A - chr3L 24766922 intron scro + chr3L_4_17750001 chr3L_17750001 RAL-907 1239 chr3L 10735815 10735826 chr3L 10735924 10735935 6 109 4.0 9.0 6.5 0.8 120 chr3L 10735815 intergenic not near genes chr3L 10735875 intergenic not near genes chr3L 10735935 intergenic not near genes chr3L_6_10735001 chr3L_10735001 RAL-907 1240 chr3L 10825514 10825555 chr3L 10825635 10825641 9 117 1.5 7.5 4.5 1.6 127 chr3L 10825514 5` UTR CR45246 + chr3L 10825578 5` UTR CR45246 + chr3L 10825641 intergenic CR45246 + chr3L_9_10825001 chr3L_10825001 RAL-907 1241 chr3L 10907956 10907994 chr3L 10908052 10908090 6 96 0.0 6.5 3.2 1.4 134 chr3L 10907956 intergenic not near genes chr3L 10908023 intergenic not near genes chr3L 10908090 intergenic not near genes chr3L_6_10905001 chr3L_10905001 RAL-907 1242 chr3L 10956433 10956450 chr3L 10956571 10956587 4 138 4.5 0.5 2.5 1.1 154 chr3L 10956433 intergenic not near genes chr3L 10956510 intergenic not near genes chr3L 10956587 intergenic not near genes chr3L_4_10955001 chr3L_10955001 RAL-907 1243 chr3L 11087062 11087087 chr3L 11088863 11088896 S-element 7 1805 2.0 3.5 2.8 1.8 1834 chr3L 11087062 intron JIL-1 - chr3L 11087979 intron JIL-1 - chr3L 11088896 intron JIL-1 - chr3L_7_11085001 chr3L_11085001 RAL-907 1244 chr3L 11105278 11105327 chr3L 11107009 11107028 X-element 7 1727 5.0 0.0 2.5 2.0 1750 chr3L 11105278 intergenic not near genes chr3L 11106153 intergenic not near genes chr3L 11107028 exon CG32073 - chr3L_7_11105001 chr3L_11105001 RAL-907 1245 chr3L 11107640 11107673 chr3L 11107946 11107979 7 299 5.0 9.5 7.2 0.9 339 chr3L 11107640 intergenic CG32073 - chr3L 11107810 intergenic CG32073 -,CG12522 + chr3L 11107979 intergenic CG12522 +,CG32073 - chr3L_7_11105001 chr3L_11105001 RAL-907 1246 chr3L 11135508 11135527 chr3L 11135758 11135758 6 247 3.0 0.5 1.8 2.1 250 chr3L 11135508 intergenic CG14143 + chr3L 11135633 intergenic CG14143 +,CG32082 + chr3L 11135758 intergenic CG14143 +,CG32082 + chr3L_6_11135001 chr3L_11135001 RAL-907 1247 chr3L 11141449 11141466 chr3L 11141564 11141581 7 114 1.5 4.0 2.8 1.8 132 chr3L 11141449 intron CG32082 + chr3L 11141515 intron CG32082 + chr3L 11141581 intron CG32082 + chr3L_7_11140001 chr3L_11140001 RAL-907 1248 chr3L 11146206 11146224 chr3L 11146339 11146356 4 133 6.5 0.5 3.5 0.9 150 chr3L 11146206 intron CG32082 + chr3L 11146281 intron CG32082 + chr3L 11146356 intron CG32082 + chr3L_4_11145001 chr3L_11145001 RAL-907 1249 chr3L 11217491 11217535 chr3L 11217594 11217638 13 103 5.0 3.5 4.2 2.5 147 chr3L 11217491 intron CG42671 + chr3L 11217564 intron CG42671 + chr3L 11217638 intron CG42671 + chr3L_13_11215001 chr3L_11215001 RAL-907 1250 chr3L 11264470 11264492 chr3L 11271437 11271464 17.6 8 6971 6.0 3.5 4.8 1.4 6994 chr3L 11264470 intergenic not near genes chr3L 11267967 intergenic not near genes chr3L 11271464 intergenic not near genes chr3L_8_11265001 chr3L_11265001 RAL-907 1251 chr3L 11290610 11290643 chr3L 11290953 11290978 11 342 5.5 2.0 3.8 2.3 368 chr3L 11290610 intron CG6175 - chr3L 11290794 intron CG6175 - chr3L 11290978 intron CG6175 - chr3L_11_11290001 chr3L_11290001 RAL-907 1252 chr3L 11303028 11303040 chr3L 11303133 11303146 7 106 2.5 0.0 1.2 3.2 118 chr3L 11303028 intergenic not near genes chr3L 11303087 intergenic not near genes chr3L 11303146 intergenic not near genes chr3L_7_11300001 chr3L_11300001 RAL-907 1253 chr3L 11304611 11304630 chr3L 11304716 11304745 5 105 4.5 0.0 2.2 1.6 134 chr3L 11304611 intergenic not near genes chr3L 11304678 intergenic not near genes chr3L 11304745 intergenic not near genes chr3L_5_11300001 chr3L_11300001 RAL-907 1254 chr3L 11475610 11475632 chr3L 11475721 11475729 11 105 4.0 3.0 3.5 2.4 119 chr3L 11475610 intergenic Vha16-2 + chr3L 11475670 intergenic Vha16-2 + chr3L 11475729 intergenic Vha16-2 + chr3L_11_11475001 chr3L_11475001 RAL-907 1255 chr3L 11493138 11493188 chr3L 11493239 11493290 20 102 0.0 4.5 2.2 6.2 152 chr3L 11493138 intron chrb + chr3L 11493214 intron chrb + chr3L 11493290 intron chrb + chr3L_20_11490001 chr3L_11490001 RAL-907 1256 chr3L 11579559 11579575 chr3L 11579685 11579691 4 124 6.0 4.5 5.2 0.6 132 chr3L 11579559 intergenic CG43390 - chr3L 11579625 intergenic CG43390 - chr3L 11579691 intergenic CG43390 - chr3L_4_11575001 chr3L_11575001 RAL-907 1257 chr3L 11587903 11587944 chr3L 11587999 11588040 8 96 3.0 4.0 3.5 1.8 137 chr3L 11587903 intergenic rt - chr3L 11587972 intergenic rt - chr3L 11588040 intergenic rt - chr3L_8_11585001 chr3L_11585001 RAL-907 1258 chr3L 11588718 11588736 chr3L 11588891 11588907 6 175 2.5 3.0 2.8 1.6 189 chr3L 11588718 intergenic not near genes chr3L 11588812 intergenic not near genes chr3L 11588907 intergenic not near genes chr3L_6_11585001 chr3L_11585001 RAL-907 1259 chr3L 11664513 11664547 chr3L 11664650 11664669 9 132 2.5 0.0 1.2 4.1 156 chr3L 11664513 intron CG32085 - chr3L 11664591 intron CG32085 - chr3L 11664669 intron CG32085 - chr3L_9_11660001 chr3L_11660001 RAL-907 1260 chr3L 11678075 11678122 chr3L 11678182 11678229 16 107 3.5 3.5 3.5 3.6 154 chr3L 11678075 intron CG32085 - chr3L 11678152 intron CG32085 - chr3L 11678229 intron CG32085 - chr3L_16_11675001 chr3L_11675001 RAL-907 1261 chr3L 11723076 11723115 chr3L 11727891 11727930 Doc 12 4815 4.0 6.0 5.0 2.0 4854 chr3L 11723076 3` UTR Bmcp + chr3L 11725503 intron Bmcp + chr3L 11727930 3` UTR Bmcp + chr3L_12_11725001 chr3L_11725001 RAL-907 1262 chr3L 11743996 11744043 chr3L 11744124 11744128 16 118 3.5 4.5 4.0 3.2 132 chr3L 11743996 exon CG6024 - chr3L 11744062 intron CG6024 - chr3L 11744128 intron CG6024 - chr3L_16_11740001 chr3L_11740001 RAL-907 1263 chr3L 11757898 11757912 chr3L 11758015 11758028 4 117 5.5 0.0 2.8 1.1 130 chr3L 11757898 intron CG6024 - chr3L 11757963 intron CG6024 - chr3L 11758028 intron CG6024 - chr3L_4_11755001 chr3L_11755001 RAL-907 1264 chr3L 11757914 11757939 chr3L 11758013 11758055 6 110 3.5 0.0 1.8 2.1 141 chr3L 11757914 intron CG6024 - chr3L 11757984 intron CG6024 - chr3L 11758055 intron CG6024 - chr3L_6_11755001 chr3L_11755001 RAL-907 1265 chr3L 9313026 9313027 chr3L 11777678 11777678 4 2464651 9.5 7.0 8.2 0.4 2464652 chr3L 9313026 intergenic not near genes chr3L 10545352 intron A2bp1 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_4_10545001 chr3L_10545001 RAL-907 1266 chr3L 11810542 11810555 chr3L 11810640 11810653 5 98 0.0 3.0 1.5 2.0 111 chr3L 11810542 intron CG42255 - chr3L 11810598 intron CG42255 - chr3L 11810653 exon CG42255 - chr3L_5_11810001 chr3L_11810001 RAL-907 1267 chr3L 11811439 11811489 chr3L 11811537 11811587 14 98 4.0 4.5 4.2 2.7 148 chr3L 11811439 intron CG42255 - chr3L 11811513 intron CG42255 - chr3L 11811587 exon CG42255 - chr3L_14_11810001 chr3L_11810001 RAL-907 1268 chr3L 11847123 11847174 chr3L 11847233 11847284 9 110 4.0 0.5 2.2 2.8 161 chr3L 11847123 intergenic CG12521 - chr3L 11847204 intergenic CG12521 - chr3L 11847284 intergenic CG12521 - chr3L_9_11845001 chr3L_11845001 RAL-907 1269 chr3L 11849317 11849349 chr3L 11849437 11849469 10 119 4.5 2.5 3.5 2.2 152 chr3L 11849317 intergenic not near genes chr3L 11849393 intergenic not near genes chr3L 11849469 intergenic not near genes chr3L_10_11845001 chr3L_11845001 RAL-907 1270 chr3L 11864543 11864581 chr3L 11865851 11865896 pogo 17 1305 1.5 2.0 1.8 6.1 1353 chr3L 11864543 intron CG44837 - chr3L 11865220 intron CG44837 - chr3L 11865896 intron CG44837 - chr3L_17_11865001 chr3L_11865001 RAL-907 1271 chr3L 11887238 11887268 chr3L 11887355 11887385 12 117 5.0 0.0 2.5 3.4 147 chr3L 11887238 intron CG44837 - chr3L 11887312 intron,3` UTR CG44837 -,CG5897 - chr3L 11887385 intron,3` UTR CG44837 -,CG5897 - chr3L_12_11885001 chr3L_11885001 RAL-907 1272 chr3L 11902088 11902108 chr3L 11902396 11902410 11 303 30.5 28.5 29.5 0.4 322 chr3L 11902088 intron CG44837 - chr3L 11902249 intron CG44837 - chr3L 11902410 intron CG44837 - chr3L_11_11900001 chr3L_11900001 RAL-907 1273 chr3L 11943474 11943520 chr3L 11943595 11943629 16 119 1.5 3.0 2.2 5.0 155 chr3L 11943474 3` UTR Rpt4R + chr3L 11943552 intergenic Rpt4R +,CG5883 - chr3L 11943629 intergenic CG5883 -,Rpt4R + chr3L_16_11940001 chr3L_11940001 RAL-907 1274 chr3L 12013895 12013934 chr3L 12014006 12014045 10 107 4.5 1.5 3.0 2.5 150 chr3L 12013895 intron rols - chr3L 12013970 intron rols - chr3L 12014045 intron rols - chr3L_10_12010001 chr3L_12010001 RAL-907 1275 chr3L 12075408 12075457 chr3L 12075517 12075561 7 108 2.5 0.0 1.2 3.2 153 chr3L 12075408 intron Sema-5c - chr3L 12075484 intron Sema-5c - chr3L 12075561 intron Sema-5c - chr3L_7_12075001 chr3L_12075001 RAL-907 1276 chr3L 12089068 12089106 chr3L 12089168 12089206 12 100 3.5 3.0 3.2 2.9 138 chr3L 12089068 exon CG17154 + chr3L 12089137 3` UTR CG17154 + chr3L 12089206 3` UTR CG17154 + chr3L_12_12085001 chr3L_12085001 RAL-907 1277 chr3L 12170787 12170824 chr3L 12170875 12170926 7 99 0.5 4.5 2.5 2.0 139 chr3L 12170787 intron Rh7 - chr3L 12170856 intron Rh7 - chr3L 12170926 intron Rh7 - chr3L_7_12170001 chr3L_12170001 RAL-907 1278 chr3L 12199936 12199969 chr3L 12200036 12200077 10 106 5.5 2.0 3.8 2.1 141 chr3L 12199936 intergenic Adk1 - chr3L 12200006 intergenic Adk1 - chr3L 12200077 intergenic Adk1 - chr3L_10_12200001 chr3L_12200001 RAL-907 1279 chr3L 12221436 12221468 chr3L 12221559 12221595 11 126 3.0 7.0 5.0 1.8 159 chr3L 12221436 intron app - chr3L 12221516 intron app - chr3L 12221595 intron app - chr3L_11_12220001 chr3L_12220001 RAL-907 1280 chr3L 12297470 12297512 chr3L 12297650 12297692 4 180 0.0 0.0 0.0 4.0 222 chr3L 12297470 intergenic not near genes chr3L 12297581 intergenic not near genes chr3L 12297692 intergenic not near genes chr3L_4_12295001 chr3L_12295001 RAL-907 1281 chr3L 12300827 12300878 chr3L 12300986 12301037 16 152 4.5 4.5 4.5 2.9 210 chr3L 12300827 intergenic CR44550 + chr3L 12300932 intergenic CR44550 + chr3L 12301037 5` UTR CR44550 + chr3L_16_12300001 chr3L_12300001 RAL-907 1282 chr3L 12318634 12318659 chr3L 12318718 12318762 7 97 3.0 1.0 2.0 2.3 128 chr3L 12318634 intergenic not near genes chr3L 12318698 intergenic not near genes chr3L 12318762 intergenic not near genes chr3L_7_12315001 chr3L_12315001 RAL-907 1283 chr3L 12344957 12345003 chr3L 12345061 12345105 15 102 2.0 1.5 1.8 5.4 148 chr3L 12344957 intron CrzR - chr3L 12345031 intron CrzR - chr3L 12345105 intron CrzR - chr3L_15_12345001 chr3L_12345001 RAL-907 1284 chr3L 12369529 12369569 chr3L 12369639 12369679 20 110 4.0 4.0 4.0 4.0 150 chr3L 12369529 intron Ncc69 - chr3L 12369604 intron Ncc69 - chr3L 12369679 intron Ncc69 - chr3L_20_12365001 chr3L_12365001 RAL-907 1285 chr3L 12381521 12381546 chr3L 12381619 12381644 6 98 0.0 1.0 0.5 4.0 123 chr3L 12381521 intron Ncc69 - chr3L 12381582 intron Ncc69 - chr3L 12381644 intron Ncc69 - chr3L_6_12380001 chr3L_12380001 RAL-907 1286 chr3L 12460310 12460316 chr3L 12460407 12460413 4 96 0.0 4.5 2.2 1.2 103 chr3L 12460310 intergenic not near genes chr3L 12460362 intergenic not near genes chr3L 12460413 intergenic not near genes chr3L_4_12460001 chr3L_12460001 RAL-907 1287 chr3L 12460318 12460342 chr3L 12460398 12460439 15 94 1.0 3.5 2.2 4.7 121 chr3L 12460318 intergenic not near genes chr3L 12460378 intergenic not near genes chr3L 12460439 intergenic not near genes chr3L_15_12460001 chr3L_12460001 RAL-907 1288 chr3L 12467238 12467275 chr3L 12467343 12467380 12 104 0.0 2.5 1.2 5.5 142 chr3L 12467238 intron eyg - chr3L 12467309 intron eyg - chr3L 12467380 intron eyg - chr3L_12_12465001 chr3L_12465001 RAL-907 1289 chr3L 12491705 12491735 chr3L 12491787 12491836 4 96 0.0 3.5 1.8 1.4 131 chr3L 12491705 intergenic CG10657 -,CR45682 + chr3L 12491770 intergenic CG10657 -,CR45682 + chr3L 12491836 3` UTR CG10657 - chr3L_4_12490001 chr3L_12490001 RAL-907 1290 chr3L 12565343 12565365 chr3L 12565477 12565485 4 128 4.0 7.5 5.8 0.6 142 chr3L 12565343 intron sowah - chr3L 12565414 intron sowah - chr3L 12565485 intron sowah - chr3L_4_12565001 chr3L_12565001 RAL-907 1291 chr3L 12565367 12565391 chr3L 12565473 12565522 16 116 0.5 7.0 3.8 3.3 155 chr3L 12565367 intron sowah - chr3L 12565444 intron sowah - chr3L 12565522 intron sowah - chr3L_16_12565001 chr3L_12565001 RAL-907 1292 chr3L 12578048 12578075 chr3L 12578156 12578183 8 108 2.5 0.0 1.2 3.6 135 chr3L 12578048 intergenic not near genes chr3L 12578116 intergenic not near genes chr3L 12578183 intergenic not near genes chr3L_8_12575001 chr3L_12575001 RAL-907 1293 chr3L 12605707 12605746 chr3L 12605806 12605846 10 100 3.5 3.0 3.2 2.4 139 chr3L 12605707 intergenic not near genes chr3L 12605776 intergenic not near genes chr3L 12605846 intergenic not near genes chr3L_10_12605001 chr3L_12605001 RAL-907 1294 chr3L 12610975 12611023 chr3L 12611241 12611289 13 266 2.0 2.0 2.0 4.3 314 chr3L 12610975 intron caup + chr3L 12611132 intron caup + chr3L 12611289 intron caup + chr3L_13_12610001 chr3L_12610001 RAL-907 1295 chr3L 12626136 12626165 chr3L 12626265 12626294 10 128 1.0 2.0 1.5 4.0 158 chr3L 12626136 intergenic not near genes chr3L 12626215 intergenic not near genes chr3L 12626294 intergenic not near genes chr3L_10_12625001 chr3L_12625001 RAL-907 1296 chr3L 12647938 12647975 chr3L 12648024 12648071 14 93 2.5 5.5 4.0 2.8 133 chr3L 12647938 5` UTR CR32111 + chr3L 12648004 5` UTR CR32111 + chr3L 12648071 5` UTR CR32111 + chr3L_14_12645001 chr3L_12645001 RAL-907 1297 chr3L 12656767 12656778 chr3L 12656880 12656890 4 109 2.5 2.5 2.5 1.1 123 chr3L 12656767 intergenic not near genes chr3L 12656828 intergenic not near genes chr3L 12656890 intergenic not near genes chr3L_4_12655001 chr3L_12655001 RAL-907 1298 chr3L 12656782 12656799 chr3L 12656878 12656925 5 114 1.5 2.0 1.8 1.8 143 chr3L 12656782 intergenic not near genes chr3L 12656854 intergenic not near genes chr3L 12656925 intergenic not near genes chr3L_5_12655001 chr3L_12655001 RAL-907 1299 chr3L 12689626 12689674 chr3L 12689727 12689765 17 99 2.0 8.5 5.2 2.7 139 chr3L 12689626 intergenic not near genes chr3L 12689696 intergenic not near genes chr3L 12689765 intergenic not near genes chr3L_17_12685001 chr3L_12685001 RAL-907 1300 chr3L 12728017 12728044 chr3L 12728121 12728148 6 104 2.0 12.0 7.0 0.8 131 chr3L 12728017 intergenic not near genes chr3L 12728082 intergenic not near genes chr3L 12728148 intergenic not near genes chr3L_6_12725001 chr3L_12725001 RAL-907 1301 chr3L 12743262 12743271 chr3L 12743359 12743368 4 97 0.5 0.0 0.2 3.3 106 chr3L 12743262 intron CG32112 + chr3L 12743315 intron CG32112 + chr3L 12743368 intron CG32112 + chr3L_4_12740001 chr3L_12740001 RAL-907 1302 chr3L 12836888 12836916 chr3L 12837036 12837078 9 158 3.5 6.5 5.0 1.5 190 chr3L 12836888 intron CG10960 - chr3L 12836983 intron CG10960 - chr3L 12837078 intron CG10960 - chr3L_9_12835001 chr3L_12835001 RAL-907 1303 chr3L 12837205 12837236 chr3L 12837320 12837341 8 110 7.0 2.0 4.5 1.5 136 chr3L 12837205 intron CG10960 - chr3L 12837273 intron CG10960 - chr3L 12837341 intron CG10960 - chr3L_8_12835001 chr3L_12835001 RAL-907 1304 chr3L 12857973 12857999 chr3L 12858088 12858114 6 115 1.0 2.0 1.5 2.4 141 chr3L 12857973 3` UTR CG32107 - chr3L 12858044 3` UTR CG32107 - chr3L 12858114 3` UTR CG32107 - chr3L_6_12855001 chr3L_12855001 RAL-907 1305 chr3L 12874918 12874954 chr3L 12877225 12877266 jockey 9 2311 2.5 6.0 4.2 1.7 2348 chr3L 12874918 intergenic not near genes chr3L 12876092 intergenic not near genes chr3L 12877266 intergenic not near genes chr3L_9_12875001 chr3L_12875001 RAL-907 1306 chr3L 12894791 12894811 chr3L 12894879 12894909 8 92 12.5 7.0 9.8 0.7 118 chr3L 12894791 intergenic CG14118 + chr3L 12894850 intergenic CG14118 + chr3L 12894909 intergenic CG14118 + chr3L_8_12890001 chr3L_12890001 RAL-907 1307 chr3L 12955114 12955163 chr3L 12955210 12955247 16 92 3.0 5.5 4.2 3.1 133 chr3L 12955114 intergenic CG10752 - chr3L 12955180 intergenic not near genes chr3L 12955247 intergenic not near genes chr3L_16_12955001 chr3L_12955001 RAL-907 1308 chr3L 12957770 12957814 chr3L 12962272 12962316 copia 16 4499 7.5 6.5 7.0 2.0 4546 chr3L 12957770 intergenic not near genes chr3L 12960043 intergenic not near genes chr3L 12962316 intergenic not near genes chr3L_16_12960001 chr3L_12960001 RAL-907 1309 chr3L 12967126 12967157 chr3L 12967225 12967244 8 97 2.5 5.0 3.8 1.7 118 chr3L 12967126 exon Or69a - chr3L 12967185 exon Or69a - chr3L 12967244 exon Or69a - chr3L_8_12965001 chr3L_12965001 RAL-907 1310 chr3L 12967159 12967169 chr3L 12967218 12967258 7 82 1.0 4.0 2.5 2.0 99 chr3L 12967159 exon Or69a - chr3L 12967208 exon Or69a - chr3L 12967258 exon Or69a - chr3L_7_12965001 chr3L_12965001 RAL-907 1311 chr3L 13000306 13000313 chr3L 13000414 13000421 4 108 0.0 5.5 2.8 1.1 115 chr3L 13000306 intergenic not near genes chr3L 13000364 intergenic not near genes chr3L 13000421 intergenic not near genes chr3L_4_13000001 chr3L_13000001 RAL-907 1312 chr3L 13007683 13007722 chr3L 13007795 13007810 8 105 0.0 3.0 1.5 3.2 127 chr3L 13007683 exon CG11263 + chr3L 13007746 3` UTR CG11263 + chr3L 13007810 3` UTR CG11263 + chr3L_8_13005001 chr3L_13005001 RAL-907 1313 chr3L 13031558 13031606 chr3L 13031665 13031665 16 101 2.0 3.5 2.8 4.2 107 chr3L 13031558 intron CG17672 + chr3L 13031612 intron CG17672 + chr3L 13031665 intron CG17672 + chr3L_16_13030001 chr3L_13030001 RAL-907 1314 chr3L 13050553 13050594 chr3L 13050652 13050687 9 94 6.5 2.5 4.5 1.6 134 chr3L 13050553 intergenic not near genes chr3L 13050620 intergenic not near genes chr3L 13050687 intergenic not near genes chr3L_9_13050001 chr3L_13050001 RAL-907 1315 chr3L 13085039 13085079 chr3L 13085138 13085141 9 94 0.0 3.5 1.8 3.2 102 chr3L 13085039 intergenic not near genes chr3L 13085090 intergenic not near genes chr3L 13085141 intergenic not near genes chr3L_9_13085001 chr3L_13085001 RAL-907 1316 chr3L 13137648 13137665 chr3L 13137750 13137763 6 100 11.5 6.5 9.0 0.6 115 chr3L 13137648 intergenic not near genes chr3L 13137706 intergenic not near genes chr3L 13137763 intergenic not near genes chr3L_6_13135001 chr3L_13135001 RAL-907 1317 chr3L 13137669 13137681 chr3L 13137737 13137776 5 83 7.5 5.0 6.2 0.7 107 chr3L 13137669 intergenic not near genes chr3L 13137722 intergenic not near genes chr3L 13137776 intergenic not near genes chr3L_5_13135001 chr3L_13135001 RAL-907 1318 chr3L 13154059 13154092 chr3L 13154160 13154192 6 98 2.0 3.0 2.5 1.7 133 chr3L 13154059 intergenic not near genes chr3L 13154126 intergenic not near genes chr3L 13154192 intergenic not near genes chr3L_6_13150001 chr3L_13150001 RAL-907 1319 chr3L 13159278 13159303 chr3L 13159377 13159402 7 99 2.5 0.0 1.2 3.2 124 chr3L 13159278 intergenic not near genes chr3L 13159340 intergenic not near genes chr3L 13159402 intergenic not near genes chr3L_7_13155001 chr3L_13155001 RAL-907 1320 chr3L 13178286 13178303 chr3L 13178392 13178401 6 107 9.0 0.0 4.5 1.1 115 chr3L 13178286 intergenic not near genes chr3L 13178344 intergenic not near genes chr3L 13178401 intergenic not near genes chr3L_6_13175001 chr3L_13175001 RAL-907 1321 chr3L 13178305 13178316 chr3L 13178385 13178439 5 113 7.0 0.0 3.5 1.1 134 chr3L 13178305 intergenic not near genes chr3L 13178372 intergenic not near genes chr3L 13178439 intergenic not near genes chr3L_5_13175001 chr3L_13175001 RAL-907 1322 chr3L 13194049 13194098 chr3L 13194147 13194197 14 98 1.0 4.0 2.5 4.0 148 chr3L 13194049 intergenic not near genes chr3L 13194123 intergenic not near genes chr3L 13194197 intergenic not near genes chr3L_14_13190001 chr3L_13190001 RAL-907 1323 chr3L 13265174 13265217 chr3L 13265272 13265312 9 94 2.0 3.0 2.5 2.6 138 chr3L 13265174 intron caps + chr3L 13265243 5` UTR caps + chr3L 13265312 5` UTR caps + chr3L_9_13265001 chr3L_13265001 RAL-907 1324 chr3L 13267270 13267318 chr3L 13267395 13267451 13 130 0.5 0.0 0.2 10.8 181 chr3L 13267270 intron caps + chr3L 13267360 intron caps + chr3L 13267451 intron caps + chr3L_13_13265001 chr3L_13265001 RAL-907 1325 chr3L 13280281 13280327 chr3L 13280405 13280451 16 124 5.5 6.0 5.8 2.4 170 chr3L 13280281 intergenic not near genes chr3L 13280366 intergenic not near genes chr3L 13280451 intergenic not near genes chr3L_16_13280001 chr3L_13280001 RAL-907 1326 chr3L 13315901 13315951 chr3L 13316185 13316235 4 284 0.0 5.5 2.8 1.1 334 chr3L 13315901 intergenic not near genes chr3L 13316068 intergenic not near genes chr3L 13316235 intergenic not near genes chr3L_4_13315001 chr3L_13315001 RAL-907 1327 chr3L 13324632 13324683 chr3L 13324748 13324798 9 109 3.0 1.0 2.0 3.0 166 chr3L 13324632 3` UTR CR44558 - chr3L 13324715 3` UTR CR44558 - chr3L 13324798 3` UTR CR44558 - chr3L_9_13320001 chr3L_13320001 RAL-907 1328 chr3L 13337148 13337155 chr3L 13337259 13337266 9 111 0.0 3.0 1.5 3.6 118 chr3L 13337148 intergenic not near genes chr3L 13337207 intergenic not near genes chr3L 13337266 intergenic not near genes chr3L_9_13335001 chr3L_13335001 RAL-907 1329 chr3L 13400517 13400545 chr3L 13400613 13400641 7 96 2.0 5.0 3.5 1.6 124 chr3L 13400517 intron sens - chr3L 13400579 intron sens - chr3L 13400641 intron sens - chr3L_7_13400001 chr3L_13400001 RAL-907 1330 chr3L 13408238 13408277 chr3L 13408354 13408394 4 111 1.5 1.0 1.2 1.8 156 chr3L 13408238 intergenic not near genes chr3L 13408316 intergenic not near genes chr3L 13408394 intergenic not near genes chr3L_4_13405001 chr3L_13405001 RAL-907 1331 chr3L 13477001 13477032 chr3L 13477098 13477129 10 97 0.0 3.0 1.5 4.0 128 chr3L 13477001 intergenic not near genes chr3L 13477065 intergenic stv + chr3L 13477129 intergenic stv + chr3L_10_13475001 chr3L_13475001 RAL-907 1332 chr3L 13629516 13629541 chr3L 13629647 13629672 5 131 2.0 4.5 3.2 1.2 156 chr3L 13629516 intron bru-3 - chr3L 13629594 intron bru-3 - chr3L 13629672 intron bru-3 - chr3L_5_13625001 chr3L_13625001 RAL-907 1333 chr3L 13648867 13648915 chr3L 13648977 13648997 11 105 6.0 1.5 3.8 2.3 130 chr3L 13648867 intron bru-3 - chr3L 13648932 intron bru-3 - chr3L 13648997 intron bru-3 - chr3L_11_13645001 chr3L_13645001 RAL-907 1334 chr3L 13677516 13677560 chr3L 13677613 13677656 9 97 4.0 4.0 4.0 1.8 140 chr3L 13677516 intron bru-3 - chr3L 13677586 intron bru-3 - chr3L 13677656 intron bru-3 - chr3L_9_13675001 chr3L_13675001 RAL-907 1335 chr3L 13736724 13736768 chr3L 13737192 13737236 5 463 1.0 1.0 1.0 2.5 512 chr3L 13736724 intron bru-3 - chr3L 13736980 intron bru-3 - chr3L 13737236 intron bru-3 - chr3L_5_13735001 chr3L_13735001 RAL-907 1336 chr3L 13804535 13804558 chr3L 13822830 13822844 roo 6 18294 9.0 2.0 5.5 0.9 18309 chr3L 13804535 intergenic not near genes chr3L 13813690 intergenic not near genes chr3L 13822844 intergenic not near genes chr3L_6_13810001 chr3L_13810001 RAL-907 1337 chr3L 13884362 13884377 chr3L 13884476 13884491 4 114 13.5 7.0 10.2 0.4 129 chr3L 13884362 intron dysc - chr3L 13884426 intron dysc - chr3L 13884491 intron dysc - chr3L_4_13880001 chr3L_13880001 RAL-907 1338 chr3L 13901562 13901577 chr3L 13901649 13901674 4 93 14.0 9.5 11.8 0.3 112 chr3L 13901562 intron dysc - chr3L 13901618 intron dysc - chr3L 13901674 intron dysc - chr3L_4_13900001 chr3L_13900001 RAL-907 1339 chr3L 13907575 13907612 chr3L 13907682 13907719 5 104 9.0 8.5 8.8 0.5 144 chr3L 13907575 3` UTR Rgl - chr3L 13907647 3` UTR Rgl - chr3L 13907719 3` UTR Rgl - chr3L_5_13905001 chr3L_13905001 RAL-907 1340 chr3L 13931363 13931370 chr3L 13931488 13931495 4 125 0.5 8.0 4.2 0.8 132 chr3L 13931363 intron Gl + chr3L 13931429 intron Gl + chr3L 13931495 intron Gl + chr3L_4_13930001 chr3L_13930001 RAL-907 1341 chr3L 14092721 14092754 chr3L 14092824 14092840 9 101 5.5 2.0 3.8 1.9 119 chr3L 14092721 intergenic not near genes chr3L 14092780 intergenic not near genes chr3L 14092840 intergenic not near genes chr3L_9_14090001 chr3L_14090001 RAL-907 1342 chr3L 14180718 14180767 chr3L 14180814 14180823 13 91 3.0 1.0 2.0 4.3 105 chr3L 14180718 intergenic not near genes chr3L 14180770 intergenic not near genes chr3L 14180823 intergenic not near genes chr3L_13_14180001 chr3L_14180001 RAL-907 1343 chr3L 14194708 14194719 chr3L 14194804 14194815 7 96 7.0 5.0 6.0 1.0 107 chr3L 14194708 intron nuf + chr3L 14194762 intron nuf + chr3L 14194815 intron nuf + chr3L_7_14190001 chr3L_14190001 RAL-907 1344 chr3L 14194720 14194742 chr3L 14194800 14194838 8 94 5.0 4.0 4.5 1.5 118 chr3L 14194720 intron nuf + chr3L 14194779 intron nuf + chr3L 14194838 intron nuf + chr3L_8_14190001 chr3L_14190001 RAL-907 1345 chr3L 14196406 14196443 chr3L 14196511 14196547 11 104 3.5 3.0 3.2 2.6 141 chr3L 14196406 intron nuf + chr3L 14196476 intron nuf + chr3L 14196547 intron nuf + chr3L_11_14195001 chr3L_14195001 RAL-907 1346 chr3L 14205975 14205993 chr3L 14206059 14206101 5 100 6.0 2.5 4.2 1.0 126 chr3L 14205975 intron nuf + chr3L 14206038 intron nuf + chr3L 14206101 intron nuf + chr3L_5_14205001 chr3L_14205001 RAL-907 1347 chr3L 14245552 14245592 chr3L 14245666 14245706 1360 7 103 1.5 3.5 2.5 2.0 154 chr3L 14245552 3` UTR CR44561 - chr3L 14245629 3` UTR CR44561 - chr3L 14245706 intergenic CR44561 -,CR44560 + chr3L_7_14245001 chr3L_14245001 RAL-907 1348 chr3L 14267361 14267378 chr3L 14271811 14271838 F-element 8 4456 8.5 3.5 6.0 1.1 4477 chr3L 14267361 intergenic not near genes chr3L 14269600 intergenic not near genes chr3L 14271838 intergenic not near genes chr3L_8_14265001 chr3L_14265001 RAL-907 1349 chr3L 14282584 14282607 chr3L 14282667 14282684 4 82 3.0 1.5 2.2 1.2 100 chr3L 14282584 intron fz + chr3L 14282634 intron fz + chr3L 14282684 intron fz + chr3L_4_14280001 chr3L_14280001 RAL-907 1350 chr3L 14295963 14296010 chr3L 14296469 14296515 roo 13 503 2.5 5.5 4.0 2.6 552 chr3L 14295963 intron fz + chr3L 14296239 intron fz + chr3L 14296515 intron fz + chr3L_13_14295001 chr3L_14295001 RAL-907 1351 chr3L 14312016 14312047 chr3L 14316834 14316881 X-element 6 4819 2.5 2.5 2.5 1.7 4865 chr3L 14312016 exon fz + chr3L 14314448 intron fz + chr3L 14316881 intron fz + chr3L_6_14310001 chr3L_14310001 RAL-907 1352 chr3L 14326959 14326998 chr3L 14327102 14327154 13 147 6.0 3.0 4.5 2.4 195 chr3L 14326959 intron fz + chr3L 14327056 intron fz + chr3L 14327154 intron fz + chr3L_13_14325001 chr3L_14325001 RAL-907 1353 chr3L 14338286 14338322 chr3L 14338402 14338438 6 113 1.5 4.0 2.8 1.6 152 chr3L 14338286 intron fz + chr3L 14338362 intron fz + chr3L 14338438 intron fz + chr3L_6_14335001 chr3L_14335001 RAL-907 1354 chr3L 14341422 14341436 chr3L 14341577 14341591 4 152 0.0 2.0 1.0 2.0 169 chr3L 14341422 intron fz + chr3L 14341506 intron fz + chr3L 14341591 intron fz + chr3L_4_14340001 chr3L_14340001 RAL-907 1355 chr3L 14453693 14453696 chr3L 14453796 14453799 4 103 0.5 7.5 4.0 0.8 106 chr3L 14453693 intron bbg - chr3L 14453746 intron bbg - chr3L 14453799 intron bbg - chr3L_4_14450001 chr3L_14450001 RAL-907 1356 chr3L 14453701 14453721 chr3L 14453794 14453826 4 103 1.0 7.5 4.2 0.8 125 chr3L 14453701 intron bbg - chr3L 14453764 intron bbg - chr3L 14453826 intron bbg - chr3L_4_14450001 chr3L_14450001 RAL-907 1357 chr3L 14468429 14468477 chr3L 14473655 14473703 copia 11 5226 4.0 5.5 4.8 1.9 5274 chr3L 14468429 intron bbg - chr3L 14471066 intron bbg - chr3L 14473703 intron bbg - chr3L_11_14470001 chr3L_14470001 RAL-907 1358 chr3L 14485974 14486026 chr3L 14486242 14486294 9 267 4.5 5.0 4.8 1.6 320 chr3L 14485974 intron bbg - chr3L 14486134 intron bbg - chr3L 14486294 intron bbg - chr3L_9_14485001 chr3L_14485001 RAL-907 1359 chr3L 14518537 14518563 chr3L 14518759 14518785 9 222 4.0 3.5 3.8 1.9 248 chr3L 14518537 intron bbg - chr3L 14518661 intron bbg - chr3L 14518785 intron bbg - chr3L_9_14515001 chr3L_14515001 RAL-907 1360 chr3L 14524320 14524348 chr3L 14529102 14529132 F-element 5 4776 3.5 0.0 1.8 1.8 4812 chr3L 14524320 intron bbg - chr3L 14526726 intron bbg - chr3L 14529132 intron bbg - chr3L_5_14525001 chr3L_14525001 RAL-907 1361 chr3L 14531203 14531239 chr3L 14531336 14531372 9 133 3.5 8.5 6.0 1.3 169 chr3L 14531203 intron bbg - chr3L 14531288 intron bbg - chr3L 14531372 intron bbg - chr3L_9_14530001 chr3L_14530001 RAL-907 1362 chr3L 14565724 14565778 chr3L 14565835 14565879 14 110 4.0 5.5 4.8 2.4 155 chr3L 14565724 intergenic not near genes chr3L 14565802 intergenic not near genes chr3L 14565879 intergenic not near genes chr3L_14_14565001 chr3L_14565001 RAL-907 1363 chr3L 14635711 14635731 chr3L 14635792 14635830 4 92 3.5 2.0 2.8 1.1 119 chr3L 14635711 intron dlp + chr3L 14635770 intron dlp + chr3L 14635830 intron dlp + chr3L_4_14635001 chr3L_14635001 RAL-907 1364 chr3L 14725583 14725607 chr3L 14728597 14728621 Doc 5 3014 1.5 2.5 2.0 1.7 3038 chr3L 14725583 intron ome + chr3L 14727102 intron ome + chr3L 14728621 intron ome + chr3L_5_14725001 chr3L_14725001 RAL-907 1365 chr3L 14825144 14825157 chr3L 14832891 14832904 Stalker2 8 7747 1.0 9.0 5.0 1.3 7760 chr3L 14825144 intron CG17839 + chr3L 14829024 intron CG17839 + chr3L 14832904 intron CG17839 + chr3L_8_14825001 chr3L_14825001 RAL-907 1366 chr3L 14913895 14913930 chr3L 14913984 14914021 6 87 3.0 3.0 3.0 1.5 126 chr3L 14913895 intron DCX-EMAP + chr3L 14913958 intron DCX-EMAP + chr3L 14914021 intron DCX-EMAP + chr3L_6_14910001 chr3L_14910001 RAL-907 1367 chr3L 14970742 14970759 chr3L 14971072 14971073 F-element 6 326 6.5 0.5 3.5 1.3 331 chr3L 14970742 intergenic Tom + chr3L 14970908 intergenic not near genes chr3L 14971073 intergenic not near genes chr3L_6_14970001 chr3L_14970001 RAL-907 1368 chr3L 14973613 14973657 chr3L 14973712 14973728 4 80 5.0 4.0 4.5 0.7 115 chr3L 14973613 intergenic Brd + chr3L 14973670 intergenic Brd + chr3L 14973728 intergenic not near genes chr3L_4_14970001 chr3L_14970001 RAL-907 1369 chr3L 15026238 15026279 chr3L 15026347 15026371 6 106 1.5 2.5 2.0 2.0 133 chr3L 15026238 intron Sytbeta - chr3L 15026304 intron Sytbeta - chr3L 15026371 intron Sytbeta - chr3L_6_15025001 chr3L_15025001 RAL-907 1370 chr3L 15035138 15035181 chr3L 15038018 15038061 11 2880 17.0 11.0 14.0 0.7 2923 chr3L 15035138 intron Sytbeta - chr3L 15036600 intron Sytbeta - chr3L 15038061 intron Sytbeta - chr3L_11_15035001 chr3L_15035001 RAL-907 1371 chr3L 15037409 15037449 chr3L 15037515 15037529 7 102 1.0 0.0 0.5 4.7 120 chr3L 15037409 intron Sytbeta - chr3L 15037469 intron Sytbeta - chr3L 15037529 intron Sytbeta - chr3L_7_15035001 chr3L_15035001 RAL-907 1372 chr3L 15085029 15085085 chr3L 15086215 15086249 1360 9 1178 14.5 7.5 11.0 0.8 1220 chr3L 15085029 intron cp309 - chr3L 15085639 intron cp309 - chr3L 15086249 intron cp309 - chr3L_9_15085001 chr3L_15085001 RAL-907 1373 chr3L 15193674 15193726 chr3L 15193863 15193915 8 188 9.5 10.0 9.8 0.7 241 chr3L 15193674 intergenic not near genes chr3L 15193794 intergenic not near genes chr3L 15193915 intergenic not near genes chr3L_8_15190001 chr3L_15190001 RAL-907 1374 chr3L 15209061 15209091 chr3L 15209167 15209197 6 105 0.5 9.5 5.0 1.0 136 chr3L 15209061 intergenic CG6888 + chr3L 15209129 intergenic not near genes chr3L 15209197 intergenic not near genes chr3L_6_15205001 chr3L_15205001 RAL-907 1375 chr3L 15232507 15232518 chr3L 15232608 15232618 4 101 0.0 2.5 1.2 1.8 111 chr3L 15232507 intergenic not near genes chr3L 15232562 intergenic not near genes chr3L 15232618 intergenic not near genes chr3L_4_15230001 chr3L_15230001 RAL-907 1376 chr3L 15233538 15233563 chr3L 15233639 15233664 9 101 8.5 8.0 8.2 1.0 126 chr3L 15233538 intergenic not near genes chr3L 15233601 intergenic not near genes chr3L 15233664 intergenic not near genes chr3L_9_15230001 chr3L_15230001 RAL-907 1377 chr3L 15264038 15264081 chr3L 15264135 15264179 7 96 10.0 9.0 9.5 0.7 141 chr3L 15264038 intergenic not near genes chr3L 15264108 intergenic not near genes chr3L 15264179 intergenic not near genes chr3L_7_15260001 chr3L_15260001 RAL-907 1378 chr3L 15265762 15265802 chr3L 15265857 15265902 13 96 12.5 12.5 12.5 1.0 140 chr3L 15265762 intergenic not near genes chr3L 15265832 intergenic not near genes chr3L 15265902 intergenic not near genes chr3L_13_15265001 chr3L_15265001 RAL-907 1379 chr3L 15295752 15295800 chr3L 15298615 15298663 gypsy5 10 2863 4.5 6.5 5.5 1.5 2911 chr3L 15295752 intergenic not near genes chr3L 15297208 intergenic not near genes chr3L 15298663 intergenic Best4 + chr3L_10_15295001 chr3L_15295001 RAL-907 1380 chr3L 15320877 15320904 chr3L 15320950 15320953 4 78 2.5 4.0 3.2 1.0 76 chr3L 15320877 intergenic not near genes chr3L 15320915 intergenic not near genes chr3L 15320953 intergenic not near genes chr3L_4_15320001 chr3L_15320001 RAL-907 1381 chr3L 15358346 15358361 chr3L 15358497 15358508 5 148 7.0 10.0 8.5 0.5 162 chr3L 15358346 intergenic not near genes chr3L 15358427 intergenic not near genes chr3L 15358508 intergenic not near genes chr3L_5_15355001 chr3L_15355001 RAL-907 1382 chr3L 15384937 15384986 chr3L 15385085 15385132 20 144 4.0 2.5 3.2 4.8 195 chr3L 15384937 intergenic not near genes chr3L 15385034 intergenic not near genes chr3L 15385132 intergenic not near genes chr3L_20_15385001 chr3L_15385001 RAL-907 1383 chr3L 15393645 15393691 chr3L 15393867 15393911 12 222 1.5 2.0 1.8 4.3 266 chr3L 15393645 intergenic not near genes chr3L 15393778 intergenic not near genes chr3L 15393911 intergenic not near genes chr3L_12_15390001 chr3L_15390001 RAL-907 1384 chr3L 15406005 15406052 chr3L 15406107 15406150 5 101 5.0 5.0 5.0 0.8 145 chr3L 15406005 intergenic not near genes chr3L 15406078 intergenic not near genes chr3L 15406150 intergenic not near genes chr3L_5_15405001 chr3L_15405001 RAL-907 1385 chr3L 15423740 15423783 chr3L 15426604 15426647 opus 15 2864 7.0 6.5 6.8 1.9 2907 chr3L 15423740 intergenic not near genes chr3L 15425194 intergenic not near genes chr3L 15426647 intergenic not near genes chr3L_15_15425001 chr3L_15425001 RAL-907 1386 chr3L 15443574 15443597 chr3L 15443670 15443682 8 93 8.5 8.5 8.5 0.8 108 chr3L 15443574 intergenic not near genes chr3L 15443628 intergenic not near genes chr3L 15443682 intergenic not near genes chr3L_8_15440001 chr3L_15440001 RAL-907 1387 chr3L 15463441 15463486 chr3L 15463551 15463592 7 109 22.5 21.0 21.8 0.3 151 chr3L 15463441 intergenic not near genes chr3L 15463516 intergenic not near genes chr3L 15463592 intergenic not near genes chr3L_7_15460001 chr3L_15460001 RAL-907 1388 chr3L 15466019 15466137 chr3L 15466121 15466253 13 107 0.0 0.0 0.0 13.0 234 chr3L 15466019 intergenic not near genes chr3L 15466136 intergenic not near genes chr3L 15466253 intergenic not near genes chr3L_13_15465001 chr3L_15465001 RAL-907 1389 chr3L 15466521 15466551 chr3L 15466623 15466655 4 103 6.0 9.5 7.8 0.5 134 chr3L 15466521 intergenic not near genes chr3L 15466588 intergenic not near genes chr3L 15466655 intergenic not near genes chr3L_4_15465001 chr3L_15465001 RAL-907 1390 chr3L 15482411 15482444 chr3L 15482523 15482556 9 111 6.5 7.0 6.8 1.2 145 chr3L 15482411 intergenic not near genes chr3L 15482484 intergenic not near genes chr3L 15482556 intergenic not near genes chr3L_9_15480001 chr3L_15480001 RAL-907 1391 chr3L 15493294 15493298 chr3L 15493409 15493413 4 115 4.0 0.0 2.0 1.3 119 chr3L 15493294 exon CG12355 - chr3L 15493354 intron CG12355 - chr3L 15493413 intron CG12355 - chr3L_4_15490001 chr3L_15490001 RAL-907 1392 chr3L 15554901 15554945 chr3L 15556708 15556752 S-element 10 1804 8.5 7.5 8.0 1.1 1851 chr3L 15554901 intron AGO2 + chr3L 15555826 intron AGO2 + chr3L 15556752 intron AGO2 + chr3L_10_15555001 chr3L_15555001 RAL-907 1393 chr3L 15594615 15594649 chr3L 15594711 15594744 6 95 4.0 12.5 8.2 0.7 129 chr3L 15594615 intron RhoGAP71E + chr3L 15594680 intron RhoGAP71E + chr3L 15594744 intron RhoGAP71E + chr3L_6_15590001 chr3L_15590001 RAL-907 1394 chr3L 15600150 15600195 chr3L 15600255 15600316 4 117 6.5 0.0 3.2 1.0 166 chr3L 15600150 intron RhoGAP71E + chr3L 15600233 intron RhoGAP71E + chr3L 15600316 intron RhoGAP71E + chr3L_4_15600001 chr3L_15600001 RAL-907 1395 chr3L 15679169 15679195 chr3L 15679511 15679547 6 348 13.5 16.0 14.8 0.4 378 chr3L 15679169 intergenic not near genes chr3L 15679358 intergenic CG7304 + chr3L 15679547 intergenic CG7304 + chr3L_6_15675001 chr3L_15675001 RAL-907 1396 chr3L 15754361 15754373 chr3L 15754476 15754488 5 115 17.0 14.5 15.8 0.3 127 chr3L 15754361 intergenic not near genes chr3L 15754424 intergenic not near genes chr3L 15754488 intergenic not near genes chr3L_5_15750001 chr3L_15750001 RAL-907 1397 chr3L 15781635 15781670 chr3L 15781788 15781839 4 165 3.0 0.0 1.5 1.6 204 chr3L 15781635 intergenic not near genes chr3L 15781737 intergenic not near genes chr3L 15781839 intergenic not near genes chr3L_4_15780001 chr3L_15780001 RAL-907 1398 chr3L 15843041 15843044 chr3L 15843204 15843207 4 163 0.0 5.5 2.8 1.1 166 chr3L 15843041 intron CG32150 - chr3L 15843124 intron CG32150 - chr3L 15843207 intron CG32150 - chr3L_4_15840001 chr3L_15840001 RAL-907 1399 chr3L 15883178 15883215 chr3L 15883491 15883517 7 310 14.5 9.5 12.0 0.5 339 chr3L 15883178 intron pHCl - chr3L 15883348 intron pHCl - chr3L 15883517 intron pHCl - chr3L_7_15880001 chr3L_15880001 RAL-907 1400 chr3L 15992743 15992790 chr3L 15992970 15993008 4 225 6.5 6.5 6.5 0.5 265 chr3L 15992743 3` UTR CG5830 - chr3L 15992876 3` UTR CG5830 - chr3L 15993008 3` UTR CG5830 - chr3L_4_15990001 chr3L_15990001 RAL-907 1401 chr3L 16035025 16035033 chr3L 16035127 16035133 4 102 10.5 7.0 8.8 0.4 108 chr3L 16035025 intergenic CG42538 +,CG5895 + chr3L 16035079 intergenic CG42538 +,CG5895 + chr3L 16035133 intergenic CG42538 +,CG5895 + chr3L_4_16035001 chr3L_16035001 RAL-907 1402 chr3L 16060497 16060510 chr3L 16060656 16060669 4 159 5.5 7.5 6.5 0.5 172 chr3L 16060497 intron Mbs + chr3L 16060583 intron Mbs + chr3L 16060669 intron Mbs + chr3L_4_16060001 chr3L_16060001 RAL-907 1403 chr3L 16070726 16070757 chr3L 16070823 16070854 8 97 14.5 11.0 12.8 0.6 128 chr3L 16070726 intron Mbs + chr3L 16070790 intron Mbs + chr3L 16070854 exon Mbs + chr3L_8_16070001 chr3L_16070001 RAL-907 1404 chr3L 16158807 16158828 chr3L 16158912 16158933 4 105 9.0 18.0 13.5 0.3 126 chr3L 16158807 intron CG5151 - chr3L 16158870 intron CG5151 - chr3L 16158933 intron CG5151 - chr3L_4_16155001 chr3L_16155001 RAL-907 1405 chr3L 16177926 16177971 chr3L 16178045 16178088 14 118 7.0 8.5 7.8 1.6 162 chr3L 16177926 intergenic CR45755 - chr3L 16178007 intergenic CR45755 - chr3L 16178088 intergenic CR45755 - chr3L_14_16175001 chr3L_16175001 RAL-907 1406 chr3L 16184089 16184139 chr3L 16188928 16188958 X-element 20 4837 2.5 3.5 3.0 5.0 4869 chr3L 16184089 intergenic not near genes chr3L 16186524 intergenic not near genes chr3L 16188958 intergenic not near genes chr3L_20_16185001 chr3L_16185001 RAL-907 1407 chr3L 16212790 16212833 chr3L 16212900 16212944 6 109 17.5 11.0 14.2 0.4 154 chr3L 16212790 intergenic CG13073 - chr3L 16212867 intergenic CG13073 - chr3L 16212944 intergenic CG13073 - chr3L_6_16210001 chr3L_16210001 RAL-907 1408 chr3L 16240777 16240780 chr3L 16240897 16240932 4 144 0.0 4.0 2.0 1.3 155 chr3L 16240777 intergenic not near genes chr3L 16240854 intergenic not near genes chr3L 16240932 intergenic not near genes chr3L_4_16240001 chr3L_16240001 RAL-907 1409 chr3L 16279069 16279101 chr3L 16279170 16279202 6 101 2.0 1.5 1.8 2.1 133 chr3L 16279069 exon CG13050 - chr3L 16279136 intron CG13050 - chr3L 16279202 exon CG13050 - chr3L_6_16275001 chr3L_16275001 RAL-907 1410 chr3L 16304859 16304893 chr3L 16304944 16304971 8 90 11.5 11.0 11.2 0.7 112 chr3L 16304859 intergenic CG43249 +,CG13043 - chr3L 16304915 intergenic CG43249 +,CG13043 - chr3L 16304971 intergenic CG13043 -,CG43249 + chr3L_8_16300001 chr3L_16300001 RAL-907 1411 chr3L 16431809 16431859 chr3L 16431923 16431974 5 114 8.5 4.0 6.2 0.7 165 chr3L 16431809 intron,intron CG33158 +,dsx-c73A - chr3L 16431892 intron,intron CG33158 +,dsx-c73A - chr3L 16431974 intron,intron CG33158 +,dsx-c73A - chr3L_5_16430001 chr3L_16430001 RAL-907 1412 chr3L 16437050 16437094 chr3L 16437149 16437195 8 102 11.5 10.5 11.0 0.7 145 chr3L 16437050 intron,intron CG33158 +,dsx-c73A - chr3L 16437122 intron,intron CG33158 +,dsx-c73A - chr3L 16437195 intron,intron CG33158 +,dsx-c73A - chr3L_8_16435001 chr3L_16435001 RAL-907 1413 chr3L 16443829 16443872 chr3L 16446189 16446232 Doc 7 2360 4.0 2.0 3.0 1.8 2403 chr3L 16443829 intron,intron CG33158 +,dsx-c73A - chr3L 16445030 intron,intron CG33158 +,dsx-c73A - chr3L 16446232 intron,intron CG33158 +,dsx-c73A - chr3L_7_16445001 chr3L_16445001 RAL-907 1414 chr3L 16458250 16458287 chr3L 16458383 16458395 4 127 7.0 9.5 8.2 0.4 145 chr3L 16458250 intron CG33158 + chr3L 16458322 intron CG33158 + chr3L 16458395 intron CG33158 + chr3L_4_16455001 chr3L_16455001 RAL-907 1415 chr3L 16493973 16494005 chr3L 16494498 16494527 jockey 5 532 6.0 6.0 6.0 0.7 554 chr3L 16493973 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494250 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494527 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_5_16490001 chr3L_16490001 RAL-907 1416 chr3L 16506657 16506683 chr3L 16506856 16506891 4 208 14.5 11.0 12.8 0.3 234 chr3L 16506657 intron CG43373 - chr3L 16506774 intron CG43373 - chr3L 16506891 intron CG43373 - chr3L_4_16505001 chr3L_16505001 RAL-907 1417 chr3L 16513603 16513651 chr3L 16514024 16514062 10 418 9.5 8.5 9.0 1.0 459 chr3L 16513603 intron CG43373 - chr3L 16513832 intron CG43373 - chr3L 16514062 intron CG43373 - chr3L_10_16510001 chr3L_16510001 RAL-907 1418 chr3L 16533569 16533583 chr3L 16533689 16533714 6 126 12.0 10.0 11.0 0.5 145 chr3L 16533569 intron CG43373 - chr3L 16533642 intron CG43373 - chr3L 16533714 intron CG43373 - chr3L_6_16530001 chr3L_16530001 RAL-907 1419 chr3L 16542915 16542965 chr3L 16543034 16543064 5 115 17.0 18.0 17.5 0.3 149 chr3L 16542915 intron CG43373 - chr3L 16542990 intron CG43373 - chr3L 16543064 intron CG43373 - chr3L_5_16540001 chr3L_16540001 RAL-907 1420 chr3L 16610665 16610718 chr3L 16610770 16610814 20 103 3.5 1.0 2.2 6.2 149 chr3L 16610665 3` UTR Su(P) - chr3L 16610740 exon Su(P) - chr3L 16610814 exon Su(P) - chr3L_20_16610001 chr3L_16610001 RAL-907 1421 chr3L 16616491 16616540 chr3L 16621838 16621858 297 9 5337 1.5 2.5 2.0 3.0 5367 chr3L 16616491 3` UTR Abl - chr3L 16619174 3` UTR Abl - chr3L 16621858 3` UTR Abl - chr3L_9_16615001 chr3L_16615001 RAL-907 1422 chr3L 16652664 16652700 chr3L 16652763 16652794 4 94 14.0 11.5 12.8 0.3 130 chr3L 16652664 intron Baldspot - chr3L 16652729 intron Baldspot - chr3L 16652794 intron Baldspot - chr3L_4_16650001 chr3L_16650001 RAL-907 1423 chr3L 16684004 16684043 chr3L 16689245 16689284 copia 16 5241 6.0 7.5 6.8 2.1 5280 chr3L 16684004 intron,intron Lasp -,CG43954 - chr3L 16686644 intron,intron Lasp -,CG43954 - chr3L 16689284 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_16_16685001 chr3L_16685001 RAL-907 1424 chr3L 16728076 16728106 chr3L 16728181 16728219 4 109 11.0 10.0 10.5 0.3 143 chr3L 16728076 intergenic PGRP-SB1 -,Dbp73D - chr3L 16728148 intergenic PGRP-SB1 -,Dbp73D - chr3L 16728219 intergenic PGRP-SB1 -,Dbp73D - chr3L_4_16725001 chr3L_16725001 RAL-907 1425 chr3L 16749192 16749233 chr3L 16749288 16749329 6 89 7.5 13.5 10.5 0.5 137 chr3L 16749192 intergenic not near genes chr3L 16749260 intergenic not near genes chr3L 16749329 intergenic not near genes chr3L_6_16745001 chr3L_16745001 RAL-907 1426 chr3L 16757626 16757666 chr3L 16757736 16757776 6 109 8.5 4.0 6.2 0.8 150 chr3L 16757626 intergenic not near genes chr3L 16757701 intergenic not near genes chr3L 16757776 intergenic not near genes chr3L_6_16755001 chr3L_16755001 RAL-907 1427 chr3L 16772485 16772513 chr3L 16772582 16772623 7 108 7.0 10.5 8.8 0.7 138 chr3L 16772485 intron Nrt + chr3L 16772554 intron Nrt + chr3L 16772623 intron Nrt + chr3L_7_16770001 chr3L_16770001 RAL-907 1428 chr3L 16799262 16799283 chr3L 16799359 16799380 5 97 15.5 18.0 16.8 0.3 118 chr3L 16799262 intron CG9674 - chr3L 16799321 intron CG9674 - chr3L 16799380 intron CG9674 - chr3L_5_16795001 chr3L_16795001 RAL-907 1429 chr3L 16815836 16815886 chr3L 16815942 16815988 4 102 0.0 6.0 3.0 1.0 152 chr3L 16815836 intron,intron nudC +,CG13024 - chr3L 16815912 intron,intron nudC +,CG13024 - chr3L 16815988 intron,intron nudC +,CG13024 - chr3L_4_16815001 chr3L_16815001 RAL-907 1430 chr3L 16818726 16818774 chr3L 16818822 16818870 9 96 14.5 17.5 16.0 0.5 144 chr3L 16818726 intron,intron nudC +,CG13024 - chr3L 16818798 intron,intron nudC +,CG13024 - chr3L 16818870 intron,intron nudC +,CG13024 - chr3L_9_16815001 chr3L_16815001 RAL-907 1431 chr3L 16845007 16845044 chr3L 16845140 16845177 4 133 2.0 6.0 4.0 0.8 170 chr3L 16845007 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845092 intergenic CG9669 -,CG9715 + chr3L 16845177 intergenic CG9669 -,CG9715 + chr3L_4_16845001 chr3L_16845001 RAL-907 1432 chr3L 16866193 16866240 chr3L 16866304 16866350 5 110 7.0 7.0 7.0 0.6 157 chr3L 16866193 intron Lmpt + chr3L 16866272 intron Lmpt + chr3L 16866350 intron Lmpt + chr3L_5_16865001 chr3L_16865001 RAL-907 1433 chr3L 16894945 16894977 chr3L 16895048 16895076 5 101 5.5 7.5 6.5 0.7 131 chr3L 16894945 intron Lmpt + chr3L 16895010 intron Lmpt + chr3L 16895076 intron Lmpt + chr3L_5_16895001 chr3L_16895001 RAL-907 1434 chr3L 16912913 16912956 chr3L 16913011 16913054 7 96 0.0 3.5 1.8 2.5 141 chr3L 16912913 intron Lmpt + chr3L 16912984 intron Lmpt + chr3L 16913054 intron Lmpt + chr3L_7_16910001 chr3L_16910001 RAL-907 1435 chr3L 16945718 16945761 chr3L 16954886 16954892 roo 13 9160 1.5 1.5 1.5 5.2 9174 chr3L 16945718 exon Obp73a + chr3L 16950305 intergenic not near genes chr3L 16954892 5` UTR Nc73EF + chr3L_13_16950001 chr3L_16950001 RAL-907 1436 chr3L 16973378 16973398 chr3L 23583083 23583103 7 6609704 23.0 10.5 16.8 0.4 6609725 chr3L 16973378 intron Exn + chr3L 20278240 exon gogo - chr3L 23583103 intron AGO3 + chr3L_7_20275001 chr3L_20275001 RAL-907 1437 chr3L 16984940 16984962 chr3L 16985170 16985192 5 230 6.5 4.5 5.5 0.8 252 chr3L 16984940 intron Exn + chr3L 16985066 intron Exn + chr3L 16985192 intron Exn + chr3L_5_16985001 chr3L_16985001 RAL-907 1438 chr3L 17026772 17026819 chr3L 17026872 17026920 9 87 6.5 2.5 4.5 1.6 148 chr3L 17026772 exon Fit2 + chr3L 17026846 3` UTR Fit2 + chr3L 17026920 3` UTR Fit2 + chr3L_9_17025001 chr3L_17025001 RAL-907 1439 chr3L 17027148 17027189 chr3L 17027260 17027301 15 109 2.0 6.0 4.0 3.0 153 chr3L 17027148 intergenic Fit2 +,CG7730 + chr3L 17027224 intergenic Fit2 +,CG7730 + chr3L 17027301 intergenic Fit2 +,CG7730 + chr3L_15_17025001 chr3L_17025001 RAL-907 1440 chr3L 17034916 17034960 chr3L 17035122 17035168 G2 13 207 0.5 3.0 1.8 4.6 252 chr3L 17034916 intergenic not near genes chr3L 17035042 intergenic not near genes chr3L 17035168 intergenic beg + chr3L_13_17035001 chr3L_17035001 RAL-907 1441 chr3L 17084985 17085032 chr3L 17094154 17094201 roo 15 9168 7.0 3.0 5.0 2.5 9216 chr3L 17084985 intron Rbp6 - chr3L 17089593 intron Rbp6 - chr3L 17094201 intron Rbp6 - chr3L_15_17085001 chr3L_17085001 RAL-907 1442 chr3L 17113858 17113887 chr3L 17113958 17113992 4 101 2.0 0.5 1.2 1.8 134 chr3L 17113858 intron Rbp6 - chr3L 17113925 intron Rbp6 - chr3L 17113992 intron Rbp6 - chr3L_4_17110001 chr3L_17110001 RAL-907 1443 chr3L 17120649 17120684 chr3L 17120730 17120780 16 95 3.0 1.0 2.0 5.3 131 chr3L 17120649 intron Rbp6 - chr3L 17120714 intron Rbp6 - chr3L 17120780 intron Rbp6 - chr3L_16_17120001 chr3L_17120001 RAL-907 1444 chr3L 17149144 17149150 chr3L 17149245 17149250 4 101 15.0 11.5 13.2 0.3 106 chr3L 17149144 intron Rbp6 - chr3L 17149197 intron Rbp6 - chr3L 17149250 intron Rbp6 - chr3L_4_17145001 chr3L_17145001 RAL-907 1445 chr3L 17272226 17272266 chr3L 17272379 17272418 10 149 0.5 4.5 2.5 2.9 192 chr3L 17272226 intergenic not near genes chr3L 17272322 intergenic not near genes chr3L 17272418 intergenic not near genes chr3L_10_17270001 chr3L_17270001 RAL-907 1446 chr3L 17329246 17329274 chr3L 17329341 17329353 7 95 12.0 10.0 11.0 0.6 107 chr3L 17329246 intergenic Or74a - chr3L 17329300 intergenic Or74a - chr3L 17329353 intergenic Or74a - chr3L_7_17325001 chr3L_17325001 RAL-907 1447 chr3L 17331044 17331096 chr3L 17331154 17331206 10 110 2.5 4.5 3.5 2.2 162 chr3L 17331044 intergenic not near genes chr3L 17331125 intergenic not near genes chr3L 17331206 intergenic not near genes chr3L_10_17330001 chr3L_17330001 RAL-907 1448 chr3L 17344611 17344651 chr3L 17344714 17344753 8 100 8.5 4.5 6.5 1.1 142 chr3L 17344611 exon brv2 - chr3L 17344682 5` UTR brv2 - chr3L 17344753 intergenic brv2 -,Mip - chr3L_8_17340001 chr3L_17340001 RAL-907 1449 chr3L 17358047 17358057 chr3L 17358148 17358158 4 101 8.5 8.0 8.2 0.4 111 chr3L 17358047 3` UTR CG7692 + chr3L 17358102 intergenic CG7692 + chr3L 17358158 intergenic CG7692 + chr3L_4_17355001 chr3L_17355001 RAL-907 1450 chr3L 17408896 17408925 chr3L 17408992 17409021 9 96 13.0 11.5 12.2 0.7 125 chr3L 17408896 intron blot - chr3L 17408958 intron blot - chr3L 17409021 intron blot - chr3L_9_17405001 chr3L_17405001 RAL-907 1451 chr3L 17510733 17510763 chr3L 17510825 17510867 5 98 9.5 11.0 10.2 0.4 134 chr3L 17510733 exon Oatp74D + chr3L 17510800 intron Oatp74D + chr3L 17510867 intron Oatp74D + chr3L_5_17510001 chr3L_17510001 RAL-907 1452 chr3L 17586949 17586987 chr3L 17587103 17587141 6 154 14.0 10.5 12.2 0.5 192 chr3L 17586949 intron Eip74EF - chr3L 17587045 intron Eip74EF - chr3L 17587141 intron Eip74EF - chr3L_6_17585001 chr3L_17585001 RAL-907 1453 chr3L 17632703 17632734 chr3L 17632836 17632867 8 133 9.0 8.0 8.5 0.8 164 chr3L 17632703 intergenic CR44567 -,CR44566 + chr3L 17632785 intergenic CR44567 - chr3L 17632867 intergenic CR44567 - chr3L_8_17630001 chr3L_17630001 RAL-907 1454 chr3L 17678892 17678900 chr3L 17678996 17679004 4 104 11.0 15.0 13.0 0.3 112 chr3L 17678892 intron CG34251 + chr3L 17678948 intron CG34251 + chr3L 17679004 intron CG34251 + chr3L_4_17675001 chr3L_17675001 RAL-907 1455 chr3L 17730831 17730875 chr3L 17738181 17738225 mdg1 17 7349 6.5 3.5 5.0 2.8 7394 chr3L 17730831 intron Ccn + chr3L 17734528 intron Ccn + chr3L 17738225 intron Ccn + chr3L_17_17730001 chr3L_17730001 RAL-907 1456 chr3L 17789829 17789868 chr3L 17789925 17789964 18 96 3.5 5.5 4.5 3.3 135 chr3L 17789829 intergenic not near genes chr3L 17789896 intergenic not near genes chr3L 17789964 intergenic not near genes chr3L_18_17785001 chr3L_17785001 RAL-907 1457 chr3L 17790602 17790633 chr3L 17790887 17790918 10 283 1.0 5.0 3.0 2.5 316 chr3L 17790602 intergenic CG42815 - chr3L 17790760 intergenic CG42815 - chr3L 17790918 intergenic CG42815 - chr3L_10_17790001 chr3L_17790001 RAL-907 1458 chr3L 17799794 17799842 chr3L 17801601 17801649 S-element 20 1806 5.0 4.0 4.5 3.6 1855 chr3L 17799794 intron NUCB1 - chr3L 17800722 intron NUCB1 - chr3L 17801649 intron NUCB1 - chr3L_20_17800001 chr3L_17800001 RAL-907 1459 chr3L 17834313 17834353 chr3L 17834497 17834537 12 184 0.0 3.5 1.8 4.3 224 chr3L 17834313 intron Grd + chr3L 17834425 intron Grd + chr3L 17834537 intron Grd + chr3L_12_17830001 chr3L_17830001 RAL-907 1460 chr3L 17837605 17837655 chr3L 17837713 17837763 8 107 5.0 10.5 7.8 0.9 158 chr3L 17837605 exon Grd + chr3L 17837684 intron Grd + chr3L 17837763 exon Grd + chr3L_8_17835001 chr3L_17835001 RAL-907 1461 chr3L 17918360 17918404 chr3L 17921177 17921227 opus 7 2822 1.5 6.0 3.8 1.5 2867 chr3L 17918360 intergenic not near genes chr3L 17919794 intergenic not near genes chr3L 17921227 intergenic not near genes chr3L_7_17915001 chr3L_17915001 RAL-907 1462 chr3L 17924885 17924933 chr3L 17924984 17925032 13 99 19.0 18.5 18.8 0.7 147 chr3L 17924885 intergenic not near genes chr3L 17924958 intergenic not near genes chr3L 17925032 intergenic not near genes chr3L_13_17920001 chr3L_17920001 RAL-907 1463 chr3L 17968129 17968165 chr3L 17968230 17968265 5 101 4.0 7.0 5.5 0.8 136 chr3L 17968129 intron Eip75B - chr3L 17968197 intron Eip75B - chr3L 17968265 intron Eip75B - chr3L_5_17965001 chr3L_17965001 RAL-907 1464 chr3L 18013956 18013958 chr3L 18014065 18014067 4 109 15.0 0.0 7.5 0.5 111 chr3L 18013956 intron Eip75B - chr3L 18014012 intron Eip75B - chr3L 18014067 intron Eip75B - chr3L_4_18010001 chr3L_18010001 RAL-907 1465 chr3L 18029938 18029981 chr3L 18030035 18030066 6 94 4.0 0.0 2.0 2.0 128 chr3L 18029938 intron Eip75B - chr3L 18030002 intron Eip75B - chr3L 18030066 intron Eip75B - chr3L_6_18030001 chr3L_18030001 RAL-907 1466 chr3L 18047690 18047722 chr3L 18056762 18056787 roo 7 9075 6.5 4.5 5.5 1.1 9097 chr3L 18047690 intron Eip75B - chr3L 18052238 intron Eip75B - chr3L 18056787 intron Eip75B - chr3L_7_18050001 chr3L_18050001 RAL-907 1467 chr3L 18057955 18058005 chr3L 18058076 18058104 7 118 10.5 6.5 8.5 0.7 149 chr3L 18057955 intron Eip75B - chr3L 18058030 intron Eip75B - chr3L 18058104 intron Eip75B - chr3L_7_18055001 chr3L_18055001 RAL-907 1468 chr3L 18064044 18064077 chr3L 18064150 18064173 4 103 1.5 2.0 1.8 1.4 129 chr3L 18064044 intron Eip75B - chr3L 18064108 intron Eip75B - chr3L 18064173 intron Eip75B - chr3L_4_18060001 chr3L_18060001 RAL-907 1469 chr3L 18066284 18066334 chr3L 18066454 18066454 5 147 4.0 5.5 4.8 0.9 170 chr3L 18066284 intergenic not near genes chr3L 18066369 intergenic not near genes chr3L 18066454 intergenic not near genes chr3L_5_18065001 chr3L_18065001 RAL-907 1470 chr3L 18073960 18074004 chr3L 18074081 18074125 8 121 6.0 6.0 6.0 1.1 165 chr3L 18073960 intergenic CG44004 - chr3L 18074042 intergenic CG44004 - chr3L 18074125 intergenic CG44004 - chr3L_8_18070001 chr3L_18070001 RAL-907 1471 chr3L 18106238 18106276 chr3L 18106377 18106415 6 136 8.0 6.5 7.2 0.7 177 chr3L 18106238 intergenic CG13698 -,mRpS26 + chr3L 18106326 intergenic CG13698 -,mRpS26 + chr3L 18106415 intergenic mRpS26 +,CG13698 - chr3L_6_18105001 chr3L_18105001 RAL-907 1472 chr3L 18107607 18107618 chr3L 18107720 18107731 4 113 10.5 8.0 9.2 0.4 124 chr3L 18107607 intergenic mRpS26 +,CG5147 - chr3L 18107669 intergenic mRpS26 +,CG5147 - chr3L 18107731 intergenic CG5147 -,mRpS26 + chr3L_4_18105001 chr3L_18105001 RAL-907 1473 chr3L 18107622 18107640 chr3L 18107713 18107753 7 109 8.0 7.5 7.8 0.8 131 chr3L 18107622 intergenic mRpS26 +,CG5147 - chr3L 18107688 intergenic CG5147 -,mRpS26 + chr3L 18107753 intergenic CG5147 -,mRpS26 + chr3L_7_18105001 chr3L_18105001 RAL-907 1474 chr3L 18122610 18122660 chr3L 18122707 18122757 8 97 8.5 9.5 9.0 0.8 147 chr3L 18122610 intergenic not near genes chr3L 18122684 intergenic not near genes chr3L 18122757 intergenic not near genes chr3L_8_18120001 chr3L_18120001 RAL-907 1475 chr3L 18150358 18150394 chr3L 18150460 18150497 8 102 13.0 14.0 13.5 0.6 139 chr3L 18150358 intron CG7330 + chr3L 18150428 intron CG7330 + chr3L 18150497 intron CG7330 + chr3L_8_18150001 chr3L_18150001 RAL-907 1476 chr3L 18160656 18160664 chr3L 18160758 18160766 6 102 9.0 4.5 6.8 0.8 110 chr3L 18160656 intron CG13699 - chr3L 18160711 intron CG13699 - chr3L 18160766 intron CG13699 - chr3L_6_18160001 chr3L_18160001 RAL-907 1477 chr3L 18163967 18164237 chr3L 18164189 18164424 7 202 13.0 16.0 14.5 0.5 457 chr3L 18163967 intergenic not near genes chr3L 18164196 intergenic not near genes chr3L 18164424 intergenic not near genes chr3L_7_18160001 chr3L_18160001 RAL-907 1478 chr3L 18172670 18172702 chr3L 18172766 18172798 11 96 9.0 3.5 6.2 1.5 128 chr3L 18172670 intron W - chr3L 18172734 intron W - chr3L 18172798 intron W - chr3L_11_18170001 chr3L_18170001 RAL-907 1479 chr3L 18175805 18175825 chr3L 18176064 18176083 4 259 8.5 13.0 10.8 0.3 278 chr3L 18175805 intron W - chr3L 18175944 intron W - chr3L 18176083 intron W - chr3L_4_18175001 chr3L_18175001 RAL-907 1480 chr3L 18198929 18198931 chr3L 24821492 24821494 9 6622563 9.0 15.5 12.2 0.7 6622565 chr3L 18198929 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_9_21510001 chr3L_21510001 RAL-907 1481 chr3L 18203584 18203630 chr3L 18203699 18203733 6 107 8.5 2.5 5.5 0.9 149 chr3L 18203584 3` UTR CG7320 + chr3L 18203658 intergenic CG7320 + chr3L 18203733 intergenic CG7320 + chr3L_6_18200001 chr3L_18200001 RAL-907 1482 chr3L 18210730 18210746 chr3L 18210821 18210837 5 94 4.5 11.0 7.8 0.6 107 chr3L 18210730 intergenic not near genes chr3L 18210784 intergenic not near genes chr3L 18210837 intergenic not near genes chr3L_5_18210001 chr3L_18210001 RAL-907 1483 chr3L 18221084 18221120 chr3L 18221179 18221201 7 91 0.5 0.0 0.2 5.8 117 chr3L 18221084 intergenic not near genes chr3L 18221142 intergenic not near genes chr3L 18221201 intergenic not near genes chr3L_7_18220001 chr3L_18220001 RAL-907 1484 chr3L 18223153 18223180 chr3L 18223246 18223263 5 96 3.0 0.0 1.5 2.0 110 chr3L 18223153 intergenic not near genes chr3L 18223208 intergenic not near genes chr3L 18223263 intergenic not near genes chr3L_5_18220001 chr3L_18220001 RAL-907 1485 chr3L 18240126 18240146 chr3L 18240249 18240269 4 123 7.5 6.0 6.8 0.5 143 chr3L 18240126 intergenic not near genes chr3L 18240198 intergenic not near genes chr3L 18240269 intergenic not near genes chr3L_4_18240001 chr3L_18240001 RAL-907 1486 chr3L 18248933 18248986 chr3L 18249051 18249104 14 115 4.5 3.5 4.0 2.8 171 chr3L 18248933 intergenic not near genes chr3L 18249018 intergenic not near genes chr3L 18249104 intergenic not near genes chr3L_14_18245001 chr3L_18245001 RAL-907 1487 chr3L 18257126 18257153 chr3L 18257224 18257251 7 98 12.5 17.0 14.8 0.4 125 chr3L 18257126 intergenic not near genes chr3L 18257188 intergenic not near genes chr3L 18257251 intergenic not near genes chr3L_7_18255001 chr3L_18255001 RAL-907 1488 chr3L 18262456 18262487 chr3L 18262559 18262590 11 103 12.0 11.0 11.5 0.9 134 chr3L 18262456 intergenic not near genes chr3L 18262523 intergenic not near genes chr3L 18262590 intergenic not near genes chr3L_11_18260001 chr3L_18260001 RAL-907 1489 chr3L 18276075 18276097 chr3L 18276190 18276212 4 115 2.0 4.5 3.2 1.0 137 chr3L 18276075 intergenic not near genes chr3L 18276144 intergenic not near genes chr3L 18276212 intergenic not near genes chr3L_4_18275001 chr3L_18275001 RAL-907 1490 chr3L 18301330 18301379 chr3L 18301439 18301488 17 109 1.0 3.0 2.0 5.7 158 chr3L 18301330 intergenic CG13700 - chr3L 18301409 intergenic CG13700 - chr3L 18301488 intergenic CG13700 - chr3L_17_18300001 chr3L_18300001 RAL-907 1491 chr3L 18337703 18337715 chr3L 18337800 18337812 5 97 6.5 8.0 7.2 0.6 109 chr3L 18337703 intergenic not near genes chr3L 18337758 intergenic not near genes chr3L 18337812 intergenic not near genes chr3L_5_18335001 chr3L_18335001 RAL-907 1492 chr3L 18359577 18359625 chr3L 18359689 18359737 6 111 8.5 10.5 9.5 0.6 160 chr3L 18359577 intergenic not near genes chr3L 18359657 intergenic not near genes chr3L 18359737 intergenic not near genes chr3L_6_18355001 chr3L_18355001 RAL-907 1493 chr3L 18376060 18376066 chr3L 18376169 18376175 5 108 18.0 12.0 15.0 0.3 115 chr3L 18376060 intergenic not near genes chr3L 18376118 intergenic not near genes chr3L 18376175 intergenic not near genes chr3L_5_18375001 chr3L_18375001 RAL-907 1494 chr3L 18436043 18436092 chr3L 18436161 18436210 15 117 9.0 12.5 10.8 1.3 167 chr3L 18436043 intergenic not near genes chr3L 18436126 intergenic not near genes chr3L 18436210 intergenic not near genes chr3L_15_18435001 chr3L_18435001 RAL-907 1495 chr3L 18437326 18437366 chr3L 18437434 18437471 6 108 14.5 16.5 15.5 0.4 145 chr3L 18437326 intergenic not near genes chr3L 18437398 intergenic not near genes chr3L 18437471 intergenic not near genes chr3L_6_18435001 chr3L_18435001 RAL-907 1496 chr3L 18445230 18445273 chr3L 18445328 18445371 4 98 11.0 7.5 9.2 0.4 141 chr3L 18445230 intergenic not near genes chr3L 18445300 intergenic not near genes chr3L 18445371 intergenic not near genes chr3L_4_18445001 chr3L_18445001 RAL-907 1497 chr3L 18448598 18448620 chr3L 18448710 18448732 5 112 14.5 6.0 10.2 0.4 134 chr3L 18448598 intergenic not near genes chr3L 18448665 intergenic not near genes chr3L 18448732 intergenic not near genes chr3L_5_18445001 chr3L_18445001 RAL-907 1498 chr3L 18456252 18456303 chr3L 18456360 18456411 13 106 3.5 3.0 3.2 3.1 159 chr3L 18456252 intergenic CR44670 - chr3L 18456332 intergenic CR44670 - chr3L 18456411 3` UTR CR44670 - chr3L_13_18455001 chr3L_18455001 RAL-907 1499 chr3L 18501328 18501368 chr3L 18501461 18501501 6 133 8.0 6.0 7.0 0.8 173 chr3L 18501328 intron AstC-R2 - chr3L 18501414 intron AstC-R2 - chr3L 18501501 intron AstC-R2 - chr3L_6_18500001 chr3L_18500001 RAL-907 1500 chr3L 18506125 18506156 chr3L 18509608 18509639 F-element 7 3482 3.0 2.5 2.8 1.8 3514 chr3L 18506125 intergenic not near genes chr3L 18507882 intergenic not near genes chr3L 18509639 intergenic not near genes chr3L_7_18505001 chr3L_18505001 RAL-907 1501 chr3L 18528611 18528617 chr3L 18537790 18537798 roo 5 9180 7.5 4.0 5.8 0.7 9187 chr3L 18528611 intergenic not near genes chr3L 18533204 intergenic not near genes chr3L 18537798 intergenic not near genes chr3L_5_18530001 chr3L_18530001 RAL-907 1502 chr3L 18528618 18528657 chr3L 18537789 18537838 roo 6 9179 2.5 4.0 3.2 1.4 9220 chr3L 18528618 intergenic not near genes chr3L 18533228 intergenic not near genes chr3L 18537838 intergenic not near genes chr3L_6_18530001 chr3L_18530001 RAL-907 1503 chr3L 18546697 18546714 chr3L 18546803 18546828 5 109 5.0 7.5 6.2 0.7 131 chr3L 18546697 intergenic not near genes chr3L 18546762 intergenic not near genes chr3L 18546828 intergenic not near genes chr3L_5_18545001 chr3L_18545001 RAL-907 1504 chr3L 18593930 18593972 chr3L 18595928 18595962 Doc 11 1997 10.0 1.5 5.8 1.6 2032 chr3L 18593930 intergenic term - chr3L 18594946 intergenic not near genes chr3L 18595962 intergenic CR45389 + chr3L_11_18590001 chr3L_18590001 RAL-907 1505 chr3L 18603168 18603180 chr3L 18603268 18603280 4 100 0.0 4.0 2.0 1.3 112 chr3L 18603168 intron,intron CG13380 -,CG4174 - chr3L 18603224 intron,intron CG13380 -,CG4174 - chr3L 18603280 intron,intron CG13380 -,CG4174 - chr3L_4_18600001 chr3L_18600001 RAL-907 1506 chr3L 18638562 18638603 chr3L 18638676 18638717 4 114 9.5 8.0 8.8 0.4 155 chr3L 18638562 intron MYPT-75D + chr3L 18638640 intron MYPT-75D + chr3L 18638717 intron MYPT-75D + chr3L_4_18635001 chr3L_18635001 RAL-907 1507 chr3L 18701111 18701150 chr3L 18701219 18701256 14 107 4.5 5.0 4.8 2.4 145 chr3L 18701111 intergenic not near genes chr3L 18701184 intergenic not near genes chr3L 18701256 intergenic not near genes chr3L_14_18700001 chr3L_18700001 RAL-907 1508 chr3L 18710745 18710789 chr3L 18718717 18718761 Stalker2 24 7969 3.0 3.0 3.0 6.0 8016 chr3L 18710745 intergenic not near genes chr3L 18714753 intergenic not near genes chr3L 18718761 intergenic not near genes chr3L_24_18710001 chr3L_18710001 RAL-907 1509 chr3L 18721761 18721799 chr3L 18721869 18721910 9 110 1.0 3.0 2.0 3.0 149 chr3L 18721761 intergenic CG12477 - chr3L 18721836 intergenic CG12477 - chr3L 18721910 3` UTR CG12477 - chr3L_9_18720001 chr3L_18720001 RAL-907 1510 chr3L 18725050 18725082 chr3L 18725686 18725718 7 636 4.5 11.5 8.0 0.8 668 chr3L 18725050 intergenic not near genes chr3L 18725384 intergenic not near genes chr3L 18725718 intergenic not near genes chr3L_7_18725001 chr3L_18725001 RAL-907 1511 chr3L 18736045 18736061 chr3L 18736160 18736176 6 115 11.0 11.5 11.2 0.5 131 chr3L 18736045 intergenic not near genes chr3L 18736110 intergenic not near genes chr3L 18736176 intergenic not near genes chr3L_6_18735001 chr3L_18735001 RAL-907 1512 chr3L 18753527 18753564 chr3L 18753629 18753666 9 102 12.5 18.5 15.5 0.5 139 chr3L 18753527 intron ftz-f1 - chr3L 18753596 intron ftz-f1 - chr3L 18753666 intron ftz-f1 - chr3L_9_18750001 chr3L_18750001 RAL-907 1513 chr3L 18765460 18765488 chr3L 18765593 18765613 6 130 13.5 9.0 11.2 0.5 153 chr3L 18765460 intron ftz-f1 - chr3L 18765536 intron ftz-f1 - chr3L 18765613 intron ftz-f1 - chr3L_6_18765001 chr3L_18765001 RAL-907 1514 chr3L 18772389 18772437 chr3L 18781090 18781128 roo 16 8699 4.5 1.0 2.8 4.2 8739 chr3L 18772389 intron ftz-f1 - chr3L 18776758 intron ftz-f1 - chr3L 18781128 intron ftz-f1 - chr3L_16_18775001 chr3L_18775001 RAL-907 1515 chr3L 18784373 18784394 chr3L 18784482 18784503 10 109 8.5 6.0 7.2 1.2 130 chr3L 18784373 intron ftz-f1 - chr3L 18784438 intron ftz-f1 - chr3L 18784503 intron ftz-f1 - chr3L_10_18780001 chr3L_18780001 RAL-907 1516 chr3L 18843855 18843874 chr3L 18843963 18843991 5 116 4.0 3.0 3.5 1.1 136 chr3L 18843855 intron Indy - chr3L 18843923 intron Indy - chr3L 18843991 intron Indy - chr3L_5_18840001 chr3L_18840001 RAL-907 1517 chr3L 18924467 18924506 chr3L 18924563 18924602 7 96 2.5 6.0 4.2 1.3 135 chr3L 18924467 intron CG32204 - chr3L 18924534 intron CG32204 - chr3L 18924602 intron CG32204 - chr3L_7_18920001 chr3L_18920001 RAL-907 1518 chr3L 18933606 18933660 chr3L 18933720 18933773 14 111 3.5 5.5 4.5 2.5 167 chr3L 18933606 intron CG32204 - chr3L 18933690 intron CG32204 - chr3L 18933773 intron CG32204 - chr3L_14_18930001 chr3L_18930001 RAL-907 1519 chr3L 18935840 18935862 chr3L 18935949 18935971 4 109 8.5 8.5 8.5 0.4 131 chr3L 18935840 intron CG32204 - chr3L 18935906 intron CG32204 - chr3L 18935971 intron CG32204 - chr3L_4_18935001 chr3L_18935001 RAL-907 1520 chr3L 18969539 18969577 chr3L 18969626 18969626 6 84 8.5 8.0 8.2 0.7 87 chr3L 18969539 intergenic not near genes chr3L 18969582 intergenic not near genes chr3L 18969626 intergenic not near genes chr3L_6_18965001 chr3L_18965001 RAL-907 1521 chr3L 19015161 19015216 chr3L 19015266 19015316 7 103 0.0 0.5 0.2 5.8 155 chr3L 19015161 intron nkd - chr3L 19015238 intron nkd - chr3L 19015316 intron nkd - chr3L_7_19015001 chr3L_19015001 RAL-907 1522 chr3L 19082026 19082068 chr3L 19082137 19082181 6 115 5.5 9.0 7.2 0.7 155 chr3L 19082026 intron Mkp3 - chr3L 19082104 intron Mkp3 - chr3L 19082181 intron Mkp3 - chr3L_6_19080001 chr3L_19080001 RAL-907 1523 chr3L 19101692 19101742 chr3L 19102084 19102133 7 391 8.0 8.5 8.2 0.8 441 chr3L 19101692 intergenic not near genes chr3L 19101912 intergenic not near genes chr3L 19102133 intergenic not near genes chr3L_7_19100001 chr3L_19100001 RAL-907 1524 chr3L 19115634 19115643 chr3L 19115832 19115841 BS 4 198 7.5 6.0 6.8 0.5 207 chr3L 19115634 intron CG14082 - chr3L 19115738 intron CG14082 - chr3L 19115841 intron CG14082 - chr3L_4_19115001 chr3L_19115001 RAL-907 1525 chr3L 19115647 19115658 chr3L 19115829 19115845 BS 5 191 6.0 5.5 5.8 0.7 198 chr3L 19115647 intron CG14082 - chr3L 19115746 intron CG14082 - chr3L 19115845 intron CG14082 - chr3L_5_19115001 chr3L_19115001 RAL-907 1526 chr3L 19117023 19117073 chr3L 19124489 19124521 mdg1 9 7459 3.0 3.0 3.0 2.2 7498 chr3L 19117023 intron CG14082 - chr3L 19120772 intron CG14082 - chr3L 19124521 intron CG14082 - chr3L_9_19120001 chr3L_19120001 RAL-907 1527 chr3L 19182365 19182419 chr3L 19182465 19182511 11 99 3.0 1.5 2.2 3.4 146 chr3L 19182365 intron fz2 - chr3L 19182438 intron fz2 - chr3L 19182511 intron fz2 - chr3L_11_19180001 chr3L_19180001 RAL-907 1528 chr3L 19208050 19208089 chr3L 19209444 19209484 Doc 10 1390 2.0 2.0 2.0 3.3 1434 chr3L 19208050 intron fz2 - chr3L 19208767 intron fz2 - chr3L 19209484 intron fz2 - chr3L_10_19205001 chr3L_19205001 RAL-907 1529 chr3L 19210105 19210132 chr3L 19210211 19210248 9 112 0.0 3.0 1.5 3.6 143 chr3L 19210105 intron fz2 - chr3L 19210176 intron fz2 - chr3L 19210248 intron fz2 - chr3L_9_19210001 chr3L_19210001 RAL-907 1530 chr3L 19222356 19222372 chr3L 19222497 19222513 7 140 12.0 11.5 11.8 0.5 157 chr3L 19222356 intron fz2 - chr3L 19222434 intron fz2 - chr3L 19222513 intron fz2 - chr3L_7_19220001 chr3L_19220001 RAL-907 1531 chr3L 19223333 19223350 chr3L 19223446 19223447 4 114 14.5 11.5 13.0 0.3 114 chr3L 19223333 intron fz2 - chr3L 19223390 intron fz2 - chr3L 19223447 intron fz2 - chr3L_4_19220001 chr3L_19220001 RAL-907 1532 chr3L 19238704 19238741 chr3L 19238831 19238867 6 127 11.0 10.0 10.5 0.5 163 chr3L 19238704 intergenic not near genes chr3L 19238786 intergenic not near genes chr3L 19238867 intergenic not near genes chr3L_6_19235001 chr3L_19235001 RAL-907 1533 chr3L 19269802 19269847 chr3L 19270026 19270048 7 215 11.5 7.0 9.2 0.7 246 chr3L 19269802 intron,exon CG14085 +,CG14088 - chr3L 19269925 intron,exon CG14085 +,CG14088 - chr3L 19270048 intron,exon CG14085 +,CG14088 - chr3L_7_19265001 chr3L_19265001 RAL-907 1534 chr3L 19342740 19342777 chr3L 19342851 19342888 8 110 3.5 2.5 3.0 2.0 148 chr3L 19342740 3` UTR CG32206 - chr3L 19342814 3` UTR CG32206 - chr3L 19342888 3` UTR CG32206 - chr3L_8_19340001 chr3L_19340001 RAL-907 1535 chr3L 19346872 19346883 chr3L 19346969 19346981 6 97 0.0 9.5 4.8 1.0 109 chr3L 19346872 intron CG32206 - chr3L 19346926 intron CG32206 - chr3L 19346981 intron CG32206 - chr3L_6_19345001 chr3L_19345001 RAL-907 1536 chr3L 19430373 19430434 chr3L 19430479 19430532 11 95 1.0 5.0 3.0 2.8 159 chr3L 19430373 intergenic not near genes chr3L 19430452 intergenic not near genes chr3L 19430532 intergenic not near genes chr3L_11_19430001 chr3L_19430001 RAL-907 1537 chr3L 19439157 19439206 chr3L 19439256 19439305 11 99 7.0 8.5 7.8 1.2 148 chr3L 19439157 intergenic not near genes chr3L 19439231 intergenic not near genes chr3L 19439305 intergenic not near genes chr3L_11_19435001 chr3L_19435001 RAL-907 1538 chr3L 19488477 19488502 chr3L 19488577 19488604 7 99 11.5 10.5 11.0 0.6 127 chr3L 19488477 intergenic pncr009:3L -,CG32212 + chr3L 19488540 intergenic pncr009:3L -,CG32212 + chr3L 19488604 intergenic pncr009:3L -,CG32212 + chr3L_7_19485001 chr3L_19485001 RAL-907 1539 chr3L 19497817 19497834 chr3L 19497927 19497944 5 110 18.0 19.0 18.5 0.3 127 chr3L 19497817 intergenic CG9449 -,CG9451 - chr3L 19497880 intergenic CG9449 -,CG9451 - chr3L 19497944 intergenic CG9449 -,CG9451 - chr3L_5_19495001 chr3L_19495001 RAL-907 1540 chr3L 19500364 19500399 chr3L 19500472 19500507 7 108 18.5 17.0 17.8 0.4 143 chr3L 19500364 intron CG9451 - chr3L 19500436 intron CG9451 - chr3L 19500507 intron CG9451 - chr3L_7_19500001 chr3L_19500001 RAL-907 1541 chr3L 19544216 19544253 chr3L 19544312 19544349 6 96 7.0 5.5 6.2 0.8 133 chr3L 19544216 intergenic CG9279 -,l(3)76BDr - chr3L 19544282 intergenic l(3)76BDr -,CG9279 - chr3L 19544349 3` UTR l(3)76BDr - chr3L_6_19540001 chr3L_19540001 RAL-907 1542 chr3L 19554830 19554851 chr3L 19554938 19554965 7 112 5.5 8.0 6.8 0.9 135 chr3L 19554830 intergenic CG9300 + chr3L 19554898 intergenic CG9300 + chr3L 19554965 intergenic CG9300 + chr3L_7_19550001 chr3L_19550001 RAL-907 1543 chr3L 19641357 19641376 chr3L 19641474 19641493 4 117 18.0 9.0 13.5 0.3 136 chr3L 19641357 intron CG8786 - chr3L 19641425 intron CG8786 - chr3L 19641493 intron CG8786 - chr3L_4_19640001 chr3L_19640001 RAL-907 1544 chr3L 19792347 19792370 chr3L 19792462 19792485 8 115 24.5 19.5 22.0 0.3 138 chr3L 19792347 intron,intron CG42637 -,Gyc76C - chr3L 19792416 intron,intron CG42637 -,Gyc76C - chr3L 19792485 intron,intron CG42637 -,Gyc76C - chr3L_8_19790001 chr3L_19790001 RAL-907 1545 chr3L 19816785 19816798 chr3L 19816886 19816932 6 127 9.5 10.0 9.8 0.6 147 chr3L 19816785 exon Fibp - chr3L 19816858 intron Fibp - chr3L 19816932 exon Fibp - chr3L_6_19815001 chr3L_19815001 RAL-907 1546 chr3L 19820288 19820319 chr3L 19827857 19827887 412 14 7569 3.0 5.5 4.2 2.7 7599 chr3L 19820288 intron Deaf1 + chr3L 19824088 intron Deaf1 + chr3L 19827887 intron Deaf1 + chr3L_14_19820001 chr3L_19820001 RAL-907 1547 chr3L 19848505 19848531 chr3L 19857716 19857718 roo 5 9204 3.5 7.0 5.2 0.8 9213 chr3L 19848505 intron Papss + chr3L 19853112 intron Papss + chr3L 19857718 intron Papss + chr3L_5_19850001 chr3L_19850001 RAL-907 1548 chr3L 19861806 19861853 chr3L 19863614 19863661 S-element 13 1801 8.0 7.0 7.5 1.5 1855 chr3L 19861806 5` UTR CR45433 + chr3L 19862734 intergenic not near genes chr3L 19863661 intergenic not near genes chr3L_13_19860001 chr3L_19860001 RAL-907 1549 chr3L 19933520 19933558 chr3L 19934360 19934365 7 833 1.5 1.5 1.5 2.8 845 chr3L 19933520 intergenic CR45678 + chr3L 19933942 5` UTR CR45678 + chr3L 19934365 intergenic CR45678 + chr3L_7_19930001 chr3L_19930001 RAL-907 1550 chr3L 19961275 19961306 chr3L 19961496 19961501 4 208 11.0 5.5 8.2 0.4 226 chr3L 19961275 intron Ac76E + chr3L 19961388 intron Ac76E + chr3L 19961501 intron Ac76E + chr3L_4_19960001 chr3L_19960001 RAL-907 1551 chr3L 19981187 19981236 chr3L 19981287 19981336 16 100 2.5 6.5 4.5 2.9 149 chr3L 19981187 intergenic CG17732 + chr3L 19981262 intergenic CG17732 + chr3L 19981336 intergenic CG17732 + chr3L_16_19980001 chr3L_19980001 RAL-907 1552 chr3L 19992087 19992107 chr3L 19992176 19992204 6 95 10.5 10.5 10.5 0.5 117 chr3L 19992087 intron,intron CG7646 +,Nca + chr3L 19992146 intron,intron CG7646 +,Nca + chr3L 19992204 intron,intron CG7646 +,Nca + chr3L_6_19990001 chr3L_19990001 RAL-907 1553 chr3L 20086767 20086814 chr3L 20086865 20086910 8 98 7.5 9.0 8.2 0.9 143 chr3L 20086767 intron sNPF-R - chr3L 20086838 intron sNPF-R - chr3L 20086910 intron sNPF-R - chr3L_8_20085001 chr3L_20085001 RAL-907 1554 chr3L 20113459 20113499 chr3L 20113574 20113613 5 112 13.0 12.5 12.8 0.4 154 chr3L 20113459 intergenic not near genes chr3L 20113536 intergenic not near genes chr3L 20113613 intergenic not near genes chr3L_5_20110001 chr3L_20110001 RAL-907 1555 chr3L 20113642 20113685 chr3L 20122919 20122962 roo 11 9277 3.5 2.5 3.0 2.8 9320 chr3L 20113642 intergenic not near genes chr3L 20118302 intergenic not near genes chr3L 20122962 intergenic not near genes chr3L_11_20115001 chr3L_20115001 RAL-907 1556 chr3L 20143063 20143112 chr3L 20143162 20143212 13 100 3.0 5.0 4.0 2.6 149 chr3L 20143063 intergenic not near genes chr3L 20143138 intergenic not near genes chr3L 20143212 intergenic not near genes chr3L_13_20140001 chr3L_20140001 RAL-907 1557 chr3L 20148264 20148317 chr3L 20148374 20148427 12 110 2.5 5.5 4.0 2.4 163 chr3L 20148264 intergenic not near genes chr3L 20148346 intergenic not near genes chr3L 20148427 intergenic not near genes chr3L_12_20145001 chr3L_20145001 RAL-907 1558 chr3L 20156156 20156190 chr3L 20156293 20156332 7 132 2.5 0.0 1.2 3.2 176 chr3L 20156156 intron CG42674 - chr3L 20156244 intron CG42674 - chr3L 20156332 intron CG42674 - chr3L_7_20155001 chr3L_20155001 RAL-907 1559 chr3L 20166196 20166231 chr3L 20166305 20166340 6 109 10.0 12.5 11.2 0.5 144 chr3L 20166196 intron CG42674 - chr3L 20166268 intron CG42674 - chr3L 20166340 intron CG42674 - chr3L_6_20165001 chr3L_20165001 RAL-907 1560 chr3L 20187449 20187471 chr3L 20187548 20187570 12 98 23.0 26.0 24.5 0.5 121 chr3L 20187449 intron CG42674 - chr3L 20187510 intron CG42674 - chr3L 20187570 intron CG42674 - chr3L_12_20185001 chr3L_20185001 RAL-907 1561 chr3L 20187473 20187486 chr3L 20187546 20187584 6 93 22.5 25.5 24.0 0.2 111 chr3L 20187473 intron CG42674 - chr3L 20187528 intron CG42674 - chr3L 20187584 intron CG42674 - chr3L_6_20185001 chr3L_20185001 RAL-907 1562 chr3L 20218212 20218227 chr3L 20218348 20218358 5 135 7.0 13.5 10.2 0.4 146 chr3L 20218212 intergenic CG6933 - chr3L 20218285 intergenic CG6933 - chr3L 20218358 intergenic CG6933 - chr3L_5_20215001 chr3L_20215001 RAL-907 1563 chr3L 20256632 20256666 chr3L 20256760 20256796 5 124 7.0 15.5 11.2 0.4 164 chr3L 20256632 exon rdgC + chr3L 20256714 intron rdgC + chr3L 20256796 intron rdgC + chr3L_5_20255001 chr3L_20255001 RAL-907 1564 chr3L 20257339 20257363 chr3L 20258479 20258488 pogo 4 1135 4.0 7.5 5.8 0.6 1149 chr3L 20257339 intron rdgC + chr3L 20257914 intron rdgC + chr3L 20258488 intron rdgC + chr3L_4_20255001 chr3L_20255001 RAL-907 1565 chr3L 20283658 20283703 chr3L 20283762 20283807 9 96 2.0 5.5 3.8 1.9 149 chr3L 20283658 intron gogo - chr3L 20283732 intron gogo - chr3L 20283807 intron gogo - chr3L_9_20280001 chr3L_20280001 RAL-907 1566 chr3L 20345587 20345639 chr3L 20345688 20345740 13 99 10.5 10.0 10.2 1.2 153 chr3L 20345587 intergenic Rbbp5 - chr3L 20345664 intergenic Rbbp5 - chr3L 20345740 3` UTR Rbbp5 - chr3L_13_20345001 chr3L_20345001 RAL-907 1567 chr3L 20386919 20386967 chr3L 20387041 20387089 9 122 1.5 2.0 1.8 3.2 170 chr3L 20386919 intron fbl + chr3L 20387004 intron fbl + chr3L 20387089 intron fbl + chr3L_9_20385001 chr3L_20385001 RAL-907 1568 chr3L 20476734 20476768 chr3L 20484353 20484387 springer 11 7619 7.0 3.0 5.0 1.8 7653 chr3L 20476734 3` UTR isoQC + chr3L 20480560 intergenic not near genes chr3L 20484387 3` UTR ZnT77C - chr3L_11_20480001 chr3L_20480001 RAL-907 1569 chr3L 20525228 20525228 chr3L 22908066 22908066 5 2382838 9.0 15.5 12.2 0.4 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_5_21715001 chr3L_21715001 RAL-907 1570 chr3L 20525228 20525228 chr3L 24821492 24821493 15 4296264 9.0 15.5 12.2 1.1 4296265 chr3L 20525228 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821493 intergenic not near genes chr3L_15_22670001 chr3L_22670001 RAL-907 1571 chr3L 20525229 20525229 chr3L 24821492 24821494 10 4296264 9.0 15.5 12.2 0.8 4296265 chr3L 20525229 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_10_22670001 chr3L_22670001 RAL-907 1572 chr3L 20525230 20525230 chr3L 24821494 24821499 5 4296265 9.0 16.0 12.5 0.4 4296269 chr3L 20525230 intron CG4825 - chr3L 22673364 intron CG14457 + chr3L 24821499 intergenic not near genes chr3L_5_22670001 chr3L_22670001 RAL-907 1573 chr3L 20652606 20652628 chr3L 20652706 20652728 6 100 14.0 20.0 17.0 0.3 122 chr3L 20652606 intergenic CR44685 + chr3L 20652667 intergenic CR44685 + chr3L 20652728 intergenic CR44685 + chr3L_6_20650001 chr3L_20650001 RAL-907 1574 chr3L 20710741 20710793 chr3L 20710838 20710890 13 95 1.5 1.0 1.2 5.9 149 chr3L 20710741 intergenic not near genes chr3L 20710816 intergenic not near genes chr3L 20710890 intergenic not near genes chr3L_13_20710001 chr3L_20710001 RAL-907 1575 chr3L 20748433 20748468 chr3L 20749644 20749679 8 1210 9.0 9.0 9.0 0.8 1246 chr3L 20748433 intergenic not near genes chr3L 20749056 intergenic not near genes chr3L 20749679 intergenic not near genes chr3L_8_20745001 chr3L_20745001 RAL-907 1576 chr3L 20821280 20821304 chr3L 20824769 20824793 NOF 4 3489 7.0 10.0 8.5 0.4 3513 chr3L 20821280 intron Pka-R1 + chr3L 20823036 intron Pka-R1 + chr3L 20824793 intron Pka-R1 + chr3L_4_20820001 chr3L_20820001 RAL-907 1577 chr3L 20849252 20849299 chr3L 20849351 20849392 15 97 1.0 4.5 2.8 3.9 140 chr3L 20849252 intron CG32432 - chr3L 20849322 intron CG32432 - chr3L 20849392 intron CG32432 - chr3L_15_20845001 chr3L_20845001 RAL-907 1578 chr3L 20858052 20858102 chr3L 20858171 20858221 10 119 10.5 10.0 10.2 0.9 169 chr3L 20858052 intron CG32432 - chr3L 20858136 intron CG32432 - chr3L 20858221 intron CG32432 - chr3L_10_20855001 chr3L_20855001 RAL-907 1579 chr3L 20917077 20917117 chr3L 20917174 20917213 5 97 7.0 10.0 8.5 0.5 136 chr3L 20917077 intergenic not near genes chr3L 20917145 intergenic not near genes chr3L 20917213 intergenic not near genes chr3L_5_20915001 chr3L_20915001 RAL-907 1580 chr3L 20931775 20931826 chr3L 20931883 20931933 9 106 3.5 1.5 2.5 2.6 158 chr3L 20931775 intron fng - chr3L 20931854 intron fng - chr3L 20931933 intron fng - chr3L_9_20930001 chr3L_20930001 RAL-907 1581 chr3L 20953203 20953230 chr3L 20953291 20953315 8 92 12.0 9.5 10.8 0.7 112 chr3L 20953203 intergenic not near genes chr3L 20953259 intergenic not near genes chr3L 20953315 intergenic not near genes chr3L_8_20950001 chr3L_20950001 RAL-907 1582 chr3L 20986769 20986789 chr3L 20986838 20986873 5 86 12.0 11.5 11.8 0.4 104 chr3L 20986769 intergenic not near genes chr3L 20986821 intergenic not near genes chr3L 20986873 intergenic not near genes chr3L_5_20985001 chr3L_20985001 RAL-907 1583 chr3L 21082189 21082235 chr3L 21082287 21082332 22 97 4.5 3.5 4.0 4.4 143 chr3L 21082189 intron ko - chr3L 21082260 intron ko - chr3L 21082332 intron ko - chr3L_22_21080001 chr3L_21080001 RAL-907 1584 chr3L 21130549 21130595 chr3L 21130763 21130783 6 207 14.0 13.0 13.5 0.4 234 chr3L 21130549 intron ko - chr3L 21130666 intron ko - chr3L 21130783 intron ko - chr3L_6_21130001 chr3L_21130001 RAL-907 1585 chr3L 21151849 21151897 chr3L 21156953 21157001 flea 14 5104 4.0 4.5 4.2 2.7 5152 chr3L 21151849 intron Ac78C - chr3L 21154425 intron Ac78C - chr3L 21157001 intron Ac78C - chr3L_14_21150001 chr3L_21150001 RAL-907 1586 chr3L 21301730 21301759 chr3L 21301823 21301865 5 90 11.0 8.0 9.5 0.5 135 chr3L 21301730 5` UTR CR45432 + chr3L 21301798 5` UTR,3` UTR CR45432 +,CG11309 - chr3L 21301865 5` UTR,3` UTR CR45432 +,CG11309 - chr3L_5_21300001 chr3L_21300001 RAL-907 1587 chr3L 21306125 21306178 chr3L 21315304 21315356 roo 10 9176 5.5 3.0 4.2 1.9 9231 chr3L 21306125 3` UTR CG7632 + chr3L 21310740 intron Pc - chr3L 21315356 3` UTR Pc - chr3L_10_21310001 chr3L_21310001 RAL-907 1588 chr3L 21361707 21361753 chr3L 21362681 21362706 G2 10 971 2.5 2.5 2.5 2.9 999 chr3L 21361707 intergenic CG32440 + chr3L 21362206 intergenic not near genes chr3L 21362706 intergenic not near genes chr3L_10_21360001 chr3L_21360001 RAL-907 1589 chr3L 21362846 21362883 chr3L 21362950 21362977 4 102 5.5 4.5 5.0 0.7 131 chr3L 21362846 intergenic not near genes chr3L 21362912 intergenic not near genes chr3L 21362977 intergenic not near genes chr3L_4_21360001 chr3L_21360001 RAL-907 1590 chr3L 21372704 21372707 chr3L 21379232 21379235 McClintock 5 6528 13.0 7.5 10.2 0.4 6531 chr3L 21372704 intergenic not near genes chr3L 21375970 intergenic not near genes chr3L 21379235 intergenic not near genes chr3L_5_21375001 chr3L_21375001 RAL-907 1591 chr3L 21372709 21372717 chr3L 21379227 21379245 McClintock 4 6526 13.0 6.5 9.8 0.4 6536 chr3L 21372709 intergenic not near genes chr3L 21375977 intergenic not near genes chr3L 21379245 intergenic not near genes chr3L_4_21375001 chr3L_21375001 RAL-907 1592 chr3L 21395124 21395173 chr3L 21395232 21395269 8 96 4.0 5.5 4.8 1.4 145 chr3L 21395124 intron rgn + chr3L 21395196 intron rgn + chr3L 21395269 intron rgn + chr3L_8_21395001 chr3L_21395001 RAL-907 1593 chr3L 21406988 21407028 chr3L 21407072 21407072 6 82 3.0 2.5 2.8 1.6 84 chr3L 21406988 intron rgn + chr3L 21407030 intron rgn + chr3L 21407072 intron rgn + chr3L_6_21405001 chr3L_21405001 RAL-907 1594 chr3L 21415888 21415913 chr3L 21416005 21416030 5 115 6.0 7.0 6.5 0.7 142 chr3L 21415888 intron rgn + chr3L 21415959 intron rgn + chr3L 21416030 intron rgn + chr3L_5_21415001 chr3L_21415001 RAL-907 1595 chr3L 16736388 16736393 chr3L 21448026 21448026 4 4711634 3.0 10.5 6.8 0.5 4711638 chr3L 16736388 intron CG9701 + chr3L 19092207 intergenic MESR6 + chr3L 21448026 3` UTR Syx7 + chr3L_4_19090001 chr3L_19090001 RAL-907 1596 chr3L 4341330 4341335 chr3L 21448027 21448027 5 17106695 7.0 10.5 8.8 0.5 17106697 chr3L 4341330 intron Cip4 - chr3L 12894678 3` UTR CG14118 + chr3L 21448027 3` UTR Syx7 + chr3L_5_12890001 chr3L_12890001 RAL-907 1597 chr3L 21613372 21613396 chr3L 21613469 21613493 4 97 8.0 9.0 8.5 0.4 121 chr3L 21613372 intergenic TfAP-2 +,S1P - chr3L 21613432 intergenic TfAP-2 +,S1P - chr3L 21613493 intergenic TfAP-2 +,S1P - chr3L_4_21610001 chr3L_21610001 RAL-907 1598 chr3L 21649755 21649801 chr3L 21649999 21650045 12 242 7.5 21.0 14.2 0.8 290 chr3L 21649755 intron CG43980 + chr3L 21649900 intron CG43980 + chr3L 21650045 intron CG43980 + chr3L_12_21645001 chr3L_21645001 RAL-907 1599 chr3L 21742488 21742534 chr3L 21742611 21742658 4 119 15.5 9.5 12.5 0.3 170 chr3L 21742488 intergenic CG14572 + chr3L 21742573 intergenic CG14572 + chr3L 21742658 intergenic CG14572 + chr3L_4_21740001 chr3L_21740001 RAL-907 1600 chr3L 21776664 21776685 chr3L 21776771 21776792 6 107 10.5 9.0 9.8 0.6 128 chr3L 21776664 intron,intron CG42689 +,CG42552 + chr3L 21776728 intron,intron CG42689 +,CG42552 + chr3L 21776792 intron,intron CG42689 +,CG42552 + chr3L_6_21775001 chr3L_21775001 RAL-907 1601 chr3L 21798754 21798796 chr3L 21798863 21798905 7 109 10.0 7.0 8.5 0.7 151 chr3L 21798754 intergenic not near genes chr3L 21798830 intergenic not near genes chr3L 21798905 intergenic not near genes chr3L_7_21795001 chr3L_21795001 RAL-907 1602 chr3L 21799922 21799957 chr3L 21800027 21800062 4 105 13.5 12.0 12.8 0.3 140 chr3L 21799922 intergenic not near genes chr3L 21799992 intergenic not near genes chr3L 21800062 intergenic not near genes chr3L_4_21795001 chr3L_21795001 RAL-907 1603 chr3L 21836718 21836758 chr3L 21836824 21836864 5 98 11.0 12.5 11.8 0.4 146 chr3L 21836718 3` UTR P5CDh1 - chr3L 21836791 3` UTR P5CDh1 - chr3L 21836864 3` UTR P5CDh1 - chr3L_5_21835001 chr3L_21835001 RAL-907 1604 chr3L 21868331 21868376 chr3L 21868670 21868720 INE-1 10 338 8.5 10.0 9.2 1.0 389 chr3L 21868331 intron mub + chr3L 21868526 intron mub + chr3L 21868720 intron mub + chr3L_10_21865001 chr3L_21865001 RAL-907 1605 chr3L 21883798 21883812 chr3L 21883898 21883912 4 100 17.0 9.5 13.2 0.3 114 chr3L 21883798 intron mub + chr3L 21883855 intron mub + chr3L 21883912 intron mub + chr3L_4_21880001 chr3L_21880001 RAL-907 1606 chr3L 21883813 21883845 chr3L 21883893 21883936 5 93 12.5 9.0 10.8 0.4 123 chr3L 21883813 intron mub + chr3L 21883874 intron mub + chr3L 21883936 intron mub + chr3L_5_21880001 chr3L_21880001 RAL-907 1607 chr3L 22034597 22034634 chr3L 22034719 22034756 7 122 11.0 10.0 10.5 0.6 159 chr3L 22034597 intergenic Oct-TyrR + chr3L 22034676 intergenic Oct-TyrR + chr3L 22034756 intergenic Oct-TyrR + chr3L_7_22030001 chr3L_22030001 RAL-907 1608 chr3L 22099659 22099670 chr3L 22105864 22105875 3S18 5 6206 10.5 4.5 7.5 0.6 6216 chr3L 22099659 intergenic not near genes chr3L 22102767 intergenic not near genes chr3L 22105875 intergenic not near genes chr3L_5_22100001 chr3L_22100001 RAL-907 1609 chr3L 22099671 22099705 chr3L 22105863 22105911 3S18 7 6202 5.5 4.0 4.8 1.2 6240 chr3L 22099671 intergenic not near genes chr3L 22102791 intergenic not near genes chr3L 22105911 intergenic not near genes chr3L_7_22100001 chr3L_22100001 RAL-907 1610 chr3L 22122159 22122201 chr3L 22122512 22122545 6 356 6.0 1.5 3.8 1.2 386 chr3L 22122159 5` UTR CR45236 + chr3L 22122352 intergenic CR45236 +,CR45235 + chr3L 22122545 intergenic CR45235 +,CR45236 + chr3L_6_22120001 chr3L_22120001 RAL-907 1611 chr3L 22130479 22130522 chr3L 22130645 22130688 17 166 4.5 2.5 3.5 3.8 209 chr3L 22130479 intergenic not near genes chr3L 22130584 intergenic not near genes chr3L 22130688 intergenic not near genes chr3L_17_22130001 chr3L_22130001 RAL-907 1612 chr3L 22137516 22137688 chr3L 22137608 22137770 13 99 9.0 14.0 11.5 1.0 254 chr3L 22137516 intron olf413 + chr3L 22137643 intron olf413 + chr3L 22137770 intron olf413 + chr3L_13_22135001 chr3L_22135001 RAL-907 1613 chr3L 22250974 22250998 chr3L 22251089 22251112 4 112 19.0 8.0 13.5 0.3 138 chr3L 22250974 intergenic not near genes chr3L 22251043 intergenic not near genes chr3L 22251112 intergenic not near genes chr3L_4_22250001 chr3L_22250001 RAL-907 1614 chr3L 22369308 22369345 chr3L 22369427 22369475 5 123 6.0 1.5 3.8 1.0 167 chr3L 22369308 intron Ten-m - chr3L 22369392 intron Ten-m - chr3L 22369475 intron Ten-m - chr3L_5_22365001 chr3L_22365001 RAL-907 1615 chr3L 22447175 22447229 chr3L 22447286 22447340 19 108 2.0 4.0 3.0 4.8 165 chr3L 22447175 intergenic not near genes chr3L 22447258 intergenic not near genes chr3L 22447340 intergenic not near genes chr3L_19_22445001 chr3L_22445001 RAL-907 1616 chr3L 22461592 22461634 chr3L 22462371 22462388 4 770 16.0 7.5 11.8 0.3 796 chr3L 22461592 intergenic laza - chr3L 22461990 intergenic not near genes chr3L 22462388 intergenic not near genes chr3L_4_22460001 chr3L_22460001 RAL-907 1617 chr3L 22543059 22543104 chr3L 22543156 22543201 11 96 14.5 13.5 14.0 0.7 142 chr3L 22543059 intergenic not near genes chr3L 22543130 intergenic not near genes chr3L 22543201 intergenic not near genes chr3L_11_22540001 chr3L_22540001 RAL-907 1618 chr3L 22555753 22555785 chr3L 22563243 22563259 blood 6 7480 6.0 2.5 4.2 1.2 7506 chr3L 22555753 intergenic not near genes chr3L 22559506 intergenic not near genes chr3L 22563259 intergenic not near genes chr3L_6_22555001 chr3L_22555001 RAL-907 1619 chr3L 22555790 22555794 chr3L 22563240 22563244 blood 4 7460 4.0 2.0 3.0 1.0 7454 chr3L 22555790 intergenic not near genes chr3L 22559517 intergenic not near genes chr3L 22563244 intergenic not near genes chr3L_4_22555001 chr3L_22555001 RAL-907 1620 chr3L 22577623 22577648 chr3L 22582427 22582431 Doc 4 4798 2.0 8.0 5.0 0.7 4808 chr3L 22577623 intergenic not near genes chr3L 22580027 intergenic not near genes chr3L 22582431 3` UTR CG14459 - chr3L_4_22580001 chr3L_22580001 RAL-907 1621 chr3L 22603919 22603940 chr3L 22604006 22604042 7 98 10.0 16.0 13.0 0.5 123 chr3L 22603919 intron CG14459 - chr3L 22603980 intron CG14459 - chr3L 22604042 intron CG14459 - chr3L_7_22600001 chr3L_22600001 RAL-907 1622 chr3L 22617175 22617218 chr3L 22624647 22624672 blood 11 7468 2.5 5.5 4.0 2.2 7497 chr3L 22617175 intron CG14459 - chr3L 22620924 intron CG14459 - chr3L 22624672 intron CG14459 - chr3L_11_22620001 chr3L_22620001 RAL-907 1623 chr3L 22761368 22761416 chr3L 22766822 22766870 Ivk 11 5453 5.0 2.0 3.5 2.4 5502 chr3L 22761368 intron SPoCk + chr3L 22764119 intron SPoCk + chr3L 22766870 intron SPoCk + chr3L_11_22760001 chr3L_22760001 RAL-907 1624 chr3L 22865982 22866012 chr3L 22867119 22867158 Doc 10 1150 4.5 4.0 4.2 1.9 1176 chr3L 22865982 intron CG33170 + chr3L 22866570 intron CG33170 + chr3L 22867158 intron CG33170 + chr3L_10_22865001 chr3L_22865001 RAL-907 1625 chr3L 22897178 22897225 chr3L 22897277 22897296 9 98 2.5 1.5 2.0 3.0 118 chr3L 22897178 intergenic not near genes chr3L 22897237 intergenic not near genes chr3L 22897296 intergenic not near genes chr3L_9_22895001 chr3L_22895001 RAL-907 1626 chr3L 20525229 20525230 chr3L 22908066 22908066 15 2382837 9.0 15.5 12.2 1.1 2382837 chr3L 20525229 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_15_21715001 chr3L_21715001 RAL-907 1627 chr3L 22908066 22908066 chr3L 24821490 24821495 14 1913427 17.0 16.0 16.5 0.8 1913429 chr3L 22908066 intergenic not near genes chr3L 23864780 intron CG40470 - chr3L 24821495 intergenic not near genes chr3L_14_23860001 chr3L_23860001 RAL-907 1628 chr3L 20525230 20525230 chr3L 22908067 22908067 5 2382837 9.0 15.5 12.2 0.4 2382837 chr3L 20525230 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_5_21715001 chr3L_21715001 RAL-907 1629 chr3L 22908067 22908067 chr3L 24821492 24821496 19 1913426 17.5 15.5 16.5 1.1 1913429 chr3L 22908067 intergenic not near genes chr3L 23864782 intron CG40470 - chr3L 24821496 intergenic not near genes chr3L_19_23860001 chr3L_23860001 RAL-907 1630 chr3L 22949196 22949222 chr3L 22949289 22949330 5 104 7.5 8.5 8.0 0.6 134 chr3L 22949196 intron Mes2 + chr3L 22949263 intron Mes2 + chr3L 22949330 intron Mes2 + chr3L_5_22945001 chr3L_22945001 RAL-907 1631 chr3L 22989847 22989894 chr3L 22996841 22996874 297 15 6986 0.5 1.5 1.0 7.5 7027 chr3L 22989847 intergenic not near genes chr3L 22993360 intergenic not near genes chr3L 22996874 intergenic not near genes chr3L_15_22990001 chr3L_22990001 RAL-907 1632 chr3L 23011130 23011179 chr3L 23011227 23011276 8 95 11.5 12.0 11.8 0.6 146 chr3L 23011130 intron nrm + chr3L 23011203 intron nrm + chr3L 23011276 intron nrm + chr3L_8_23010001 chr3L_23010001 RAL-907 1633 chr3L 23436966 23437001 chr3L 23437132 23437149 7 161 11.5 12.0 11.8 0.5 183 chr3L 23436966 intergenic not near genes chr3L 23437058 intergenic not near genes chr3L 23437149 intergenic not near genes chr3L_7_23435001 chr3L_23435001 RAL-907 1634 chr3L 23721313 23721346 chr3L 23721409 23721436 4 91 7.5 6.5 7.0 0.5 123 chr3L 23721313 intergenic not near genes chr3L 23721374 intergenic not near genes chr3L 23721436 intergenic not near genes chr3L_4_23720001 chr3L_23720001 RAL-907 1635 chr3L 18198930 18198930 chr3L 24821492 24821492 7 6622562 9.0 15.5 12.2 0.5 6622562 chr3L 18198930 intergenic not near genes chr3L 21510211 intron M6 + chr3L 24821492 intergenic not near genes chr3L_7_21510001 chr3L_21510001 RAL-907 1636 chr3L 20525229 20525230 chr3L 24821492 24821492 16 4296263 9.0 15.5 12.2 1.2 4296263 chr3L 20525229 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821492 intergenic not near genes chr3L_16_22670001 chr3L_22670001 RAL-907 1637 chr3L 18198931 18198935 chr3L 24821493 24821493 16 6622562 8.5 16.0 12.2 1.2 6622562 chr3L 18198931 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821493 intergenic not near genes chr3L_16_21510001 chr3L_21510001 RAL-907 1638 chr3L 20525228 20525230 chr3L 24821493 24821493 13 4296264 9.0 16.0 12.5 1.0 4296265 chr3L 20525228 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821493 intergenic not near genes chr3L_13_22670001 chr3L_22670001 RAL-907 1639 chr3L 18198930 18198931 chr3L 24821494 24821494 6 6622563 9.0 16.0 12.5 0.4 6622564 chr3L 18198930 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_6_21510001 chr3L_21510001 RAL-907 1640 chr3L 20525229 20525229 chr3L 24821494 24821494 5 4296265 9.0 16.0 12.5 0.4 4296265 chr3L 20525229 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_5_22670001 chr3L_22670001 RAL-907 1641 chr3L 25635718 25635739 chr3L 25635987 25636008 4 279 13.0 6.5 9.8 0.4 290 chr3L 25635718 intron CG41343 - chr3L 25635863 intron CG41343 - chr3L 25636008 intron CG41343 - chr3L_4_25635001 chr3L_25635001 RAL-907 1642 chr3L 27269452 27269464 chr3L 27269554 27269567 4 102 6.0 9.0 7.5 0.5 115 chr3L 27269452 intergenic not near genes chr3L 27269510 intergenic not near genes chr3L 27269567 intergenic not near genes chr3L_4_27265001 chr3L_27265001 RAL-907 1643 chr3L 27390432 27390711 chr3L 27390671 27390783 6 116 19.0 19.0 19.0 0.3 351 chr3L 27390432 intron Dbp80 + chr3L 27390608 intron Dbp80 + chr3L 27390783 intron Dbp80 + chr3L_6_27390001 chr3L_27390001 RAL-907 1644 chr3R 2534138 2534162 chr3R 2541707 2541745 7 7573 5.5 12.5 9.0 0.7 7607 chr3R 2534138 intergenic not near genes chr3R 2537942 intergenic not near genes chr3R 2541745 intergenic not near genes chr3R_7_2535001 chr3R_2535001 RAL-907 1645 chr3R 4063800 4063820 chr3R 4069100 4069109 4 5297 8.0 3.5 5.8 0.6 5309 chr3R 4063800 intergenic not near genes chr3R 4066454 intergenic not near genes chr3R 4069109 intergenic not near genes chr3R_4_4065001 chr3R_4065001 RAL-907 1646 chr3R 4132882 4132931 chr3R 4133056 4133105 17 174 3.5 2.0 2.8 4.5 223 chr3R 4132882 5` UTR Gfat1 + chr3R 4132994 intron Gfat1 + chr3R 4133105 intron Gfat1 + chr3R_17_4130001 chr3R_4130001 RAL-907 1647 chr3R 4206050 4206104 chr3R 4211645 4211699 mdg3 14 5592 5.5 7.0 6.2 1.9 5649 chr3R 4206050 intron CG14636 - chr3R 4208874 intron CG14636 - chr3R 4211699 intron CG14636 - chr3R_14_4205001 chr3R_4205001 RAL-907 1648 chr3R 4215869 4215910 chr3R 4222612 4222643 6 6749 19.5 19.5 19.5 0.3 6774 chr3R 4215869 intron aux + chr3R 4219256 intron,exon aux +,CG31516 - chr3R 4222643 exon aux + chr3R_6_4215001 chr3R_4215001 RAL-907 1649 chr3R 4366742 4366780 chr3R 4375145 4375182 roo 10 8401 3.0 4.5 3.8 2.1 8440 chr3R 4366742 3` UTR CG1090 + chr3R 4370962 intergenic not near genes chr3R 4375182 5` UTR CR44922 + chr3R_10_4370001 chr3R_4370001 RAL-907 1650 chr3R 4408394 4408431 chr3R 4412718 4412755 Juan 11 4320 6.5 6.0 6.2 1.5 4361 chr3R 4408394 intron CG32944 - chr3R 4410574 intron CG32944 - chr3R 4412755 intron CG32944 - chr3R_11_4410001 chr3R_4410001 RAL-907 1651 chr3R 4609539 4609571 chr3R 4610709 4610755 1360 11 1182 3.5 2.0 2.8 2.9 1216 chr3R 4609539 intergenic not near genes chr3R 4610147 intergenic not near genes chr3R 4610755 intergenic not near genes chr3R_11_4610001 chr3R_4610001 RAL-907 1652 chr3R 4722322 4722366 chr3R 4722479 4722507 13 154 5.0 2.0 3.5 2.9 185 chr3R 4722322 intron Nep2 - chr3R 4722414 intron Nep2 - chr3R 4722507 intron Nep2 - chr3R_13_4720001 chr3R_4720001 RAL-907 1653 chr3R 4739096 4739143 chr3R 4739193 4739228 10 93 2.0 4.0 3.0 2.5 132 chr3R 4739096 intron tacc - chr3R 4739162 intron tacc - chr3R 4739228 intron tacc - chr3R_10_4735001 chr3R_4735001 RAL-907 1654 chr3R 4769161 4769191 chr3R 4769248 4769289 8 97 2.5 4.5 3.5 1.8 128 chr3R 4769161 intron,intron atms +,CG44098 - chr3R 4769225 intron,intron atms +,CG44098 - chr3R 4769289 intron,intron atms +,CG44098 - chr3R_8_4765001 chr3R_4765001 RAL-907 1655 chr3R 4887465 4887495 chr3R 4894862 4894891 rover 4 7394 5.0 6.5 5.8 0.6 7426 chr3R 4887465 intergenic not near genes chr3R 4891178 intergenic not near genes chr3R 4894891 intergenic not near genes chr3R_4_4890001 chr3R_4890001 RAL-907 1656 chr3R 4975914 4975966 chr3R 4976035 4976061 14 119 3.5 3.5 3.5 3.1 147 chr3R 4975914 intergenic not near genes chr3R 4975988 intergenic not near genes chr3R 4976061 intergenic not near genes chr3R_14_4975001 chr3R_4975001 RAL-907 1657 chr3R 5045823 5045878 chr3R 5052945 5053000 HMS-Beagle 15 7122 5.5 4.5 5.0 2.5 7177 chr3R 5045823 3` UTR CR43635 - chr3R 5049412 intergenic not near genes chr3R 5053000 intergenic CR45588 - chr3R_15_5045001 chr3R_5045001 RAL-907 1658 chr3R 5067960 5068006 chr3R 5073497 5073543 mdg3 18 5536 3.0 5.0 4.0 3.6 5583 chr3R 5067960 intergenic not near genes chr3R 5070752 intergenic not near genes chr3R 5073543 intergenic not near genes chr3R_18_5070001 chr3R_5070001 RAL-907 1659 chr3R 5158123 5158170 chr3R 5158236 5158283 6 113 14.0 8.5 11.2 0.5 160 chr3R 5158123 intron dpr16 + chr3R 5158203 intron dpr16 + chr3R 5158283 intron dpr16 + chr3R_6_5155001 chr3R_5155001 RAL-907 1660 chr3R 5337726 5337772 chr3R 5338020 5338047 8 290 9.5 8.0 8.8 0.8 321 chr3R 5337726 intron mtd - chr3R 5337886 intron mtd - chr3R 5338047 intron mtd - chr3R_8_5335001 chr3R_5335001 RAL-907 1661 chr3R 5338383 5338388 chr3R 5343580 5343585 Rt1c 4 5196 14.0 5.0 9.5 0.4 5202 chr3R 5338383 intron mtd - chr3R 5340984 intron mtd - chr3R 5343585 intron mtd - chr3R_4_5340001 chr3R_5340001 RAL-907 1662 chr3R 5338389 5338413 chr3R 5343578 5343610 Rt1c 5 5193 8.0 5.0 6.5 0.7 5221 chr3R 5338389 intron mtd - chr3R 5341000 intron mtd - chr3R 5343610 intron mtd - chr3R_5_5340001 chr3R_5340001 RAL-907 1663 chr3R 5351910 5351955 chr3R 5352907 5352931 4 981 22.0 17.0 19.5 0.2 1021 chr3R 5351910 intergenic not near genes chr3R 5352420 intergenic not near genes chr3R 5352931 intergenic not near genes chr3R_4_5350001 chr3R_5350001 RAL-907 1664 chr3R 5445940 5445987 chr3R 5452420 5452467 Burdock 18 6480 5.5 5.0 5.2 2.9 6527 chr3R 5445940 intron CG14669 + chr3R 5449204 intron CG14669 + chr3R 5452467 intron CG14669 + chr3R_18_5445001 chr3R_5445001 RAL-907 1665 chr3R 5726080 5726124 chr3R 5726262 5726306 21 179 4.5 4.5 4.5 3.8 226 chr3R 5726080 intergenic not near genes chr3R 5726193 intergenic not near genes chr3R 5726306 intergenic not near genes chr3R_21_5725001 chr3R_5725001 RAL-907 1666 chr3R 5746003 5746044 chr3R 5746257 5746305 pogo 17 257 2.5 5.0 3.8 3.5 302 chr3R 5746003 3` UTR Madm + chr3R 5746154 3` UTR Madm + chr3R 5746305 3` UTR Madm + chr3R_17_5745001 chr3R_5745001 RAL-907 1667 chr3R 5746995 5747041 chr3R 5753206 5753252 diver 13 6209 5.0 1.5 3.2 3.1 6257 chr3R 5746995 intergenic Madm + chr3R 5750124 intergenic not near genes chr3R 5753252 intergenic CG2091 - chr3R_13_5750001 chr3R_5750001 RAL-907 1668 chr3R 5772355 5772405 chr3R 5772533 5772583 18 178 3.5 3.5 3.5 4.0 228 chr3R 5772355 intron CG2082 - chr3R 5772469 intron CG2082 - chr3R 5772583 intron CG2082 - chr3R_18_5770001 chr3R_5770001 RAL-907 1669 chr3R 5809134 5809144 chr3R 5809371 5809387 pogo 5 241 1.5 4.5 3.0 1.2 253 chr3R 5809134 3` UTR CG11000 + chr3R 5809260 3` UTR CG11000 + chr3R 5809387 3` UTR CG11000 + chr3R_5_5805001 chr3R_5805001 RAL-907 1670 chr3R 5822363 5822400 chr3R 5823550 5823587 1360 5 1187 14.5 7.5 11.0 0.4 1224 chr3R 5822363 3` UTR CG2023 - chr3R 5822975 3` UTR CG2023 - chr3R 5823587 3` UTR CG2023 - chr3R_5_5820001 chr3R_5820001 RAL-907 1671 chr3R 5896963 5897000 chr3R 5897335 5897379 5 377 7.5 13.5 10.5 0.4 416 chr3R 5896963 intron CG34113 - chr3R 5897171 intron CG34113 - chr3R 5897379 intron CG34113 - chr3R_5_5895001 chr3R_5895001 RAL-907 1672 chr3R 5900766 5900820 chr3R 5900872 5900910 8 104 11.0 10.0 10.5 0.7 144 chr3R 5900766 intron CG34113 - chr3R 5900838 intron CG34113 - chr3R 5900910 intron CG34113 - chr3R_8_5900001 chr3R_5900001 RAL-907 1673 chr3R 5927560 5927585 chr3R 5927800 5927845 pogo 11 256 2.0 2.0 2.0 3.7 285 chr3R 5927560 intron CG34113 - chr3R 5927702 intron CG34113 - chr3R 5927845 intron CG34113 - chr3R_11_5925001 chr3R_5925001 RAL-907 1674 chr3R 5988900 5988928 chr3R 5989121 5989149 9 221 13.5 9.0 11.2 0.7 249 chr3R 5988900 intergenic CR44927 + chr3R 5989024 intergenic CR44927 + chr3R 5989149 intergenic CR44927 + chr3R_9_5985001 chr3R_5985001 RAL-907 1675 chr3R 5989321 5989366 chr3R 5989424 5989454 4 94 4.0 4.0 4.0 0.8 133 chr3R 5989321 5` UTR CR44927 + chr3R 5989388 5` UTR CR44927 + chr3R 5989454 5` UTR CR44927 + chr3R_4_5985001 chr3R_5985001 RAL-907 1676 chr3R 6015963 6015994 chr3R 6024447 6024455 Tirant 7 8482 1.0 0.5 0.8 3.9 8492 chr3R 6015963 intergenic not near genes chr3R 6020209 intergenic not near genes chr3R 6024455 intergenic not near genes chr3R_7_6020001 chr3R_6020001 RAL-907 1677 chr3R 6029944 6029984 chr3R 6030162 6030205 5 220 2.5 4.5 3.5 1.1 261 chr3R 6029944 intergenic not near genes chr3R 6030074 intergenic not near genes chr3R 6030205 intergenic not near genes chr3R_5_6030001 chr3R_6030001 RAL-907 1678 chr3R 6048437 6048469 chr3R 6048526 6048572 10 97 11.5 8.0 9.8 0.9 135 chr3R 6048437 intergenic not near genes chr3R 6048504 intergenic not near genes chr3R 6048572 intergenic not near genes chr3R_10_6045001 chr3R_6045001 RAL-907 1679 chr3R 6109497 6109521 chr3R 6109643 6109643 5 139 6.0 10.5 8.2 0.5 146 chr3R 6109497 exon Obp83cd + chr3R 6109570 exon Obp83cd + chr3R 6109643 3` UTR,3` UTR Obp83cd +,Obp83ef - chr3R_5_6105001 chr3R_6105001 RAL-907 1680 chr3R 6121165 6121178 chr3R 6121398 6121416 BS 5 237 0.0 12.0 6.0 0.7 251 chr3R 6121165 intergenic not near genes chr3R 6121290 intergenic not near genes chr3R 6121416 intergenic not near genes chr3R_5_6120001 chr3R_6120001 RAL-907 1681 chr3R 6175162 6175201 chr3R 6182450 6182493 HMS-Beagle2 7 7286 9.0 5.0 7.0 0.9 7331 chr3R 6175162 intergenic Osi1 + chr3R 6178828 intron CR45194 + chr3R 6182493 intergenic CR45194 + chr3R_7_6175001 chr3R_6175001 RAL-907 1682 chr3R 6191165 6191199 chr3R 6191254 6191299 8 99 5.5 5.5 5.5 1.2 134 chr3R 6191165 intron NPFR + chr3R 6191232 intron NPFR + chr3R 6191299 intron NPFR + chr3R_8_6190001 chr3R_6190001 RAL-907 1683 chr3R 6330760 6330811 chr3R 6330895 6330946 11 134 10.5 10.5 10.5 1.0 186 chr3R 6330760 exon Osi18 + chr3R 6330853 intron Osi18 + chr3R 6330946 intron Osi18 + chr3R_11_6330001 chr3R_6330001 RAL-907 1684 chr3R 6334774 6334809 chr3R 6334892 6334927 4 115 9.0 9.0 9.0 0.4 153 chr3R 6334774 intergenic not near genes chr3R 6334850 intergenic not near genes chr3R 6334927 intergenic Osi19 + chr3R_4_6330001 chr3R_6330001 RAL-907 1685 chr3R 6484065 6484085 chr3R 6484177 6484198 8 111 11.5 10.5 11.0 0.7 133 chr3R 6484065 intron CG15186 + chr3R 6484132 intron CG15186 + chr3R 6484198 intron CG15186 + chr3R_8_6480001 chr3R_6480001 RAL-907 1686 chr3R 6496640 6496669 chr3R 6496748 6496776 5 108 11.0 16.0 13.5 0.3 136 chr3R 6496640 intergenic not near genes chr3R 6496708 intergenic not near genes chr3R 6496776 intergenic not near genes chr3R_5_6495001 chr3R_6495001 RAL-907 1687 chr3R 6510010 6510054 chr3R 6515111 6515141 jockey 8 5099 3.5 4.5 4.0 1.6 5131 chr3R 6510010 intergenic not near genes chr3R 6512576 intergenic not near genes chr3R 6515141 intergenic not near genes chr3R_8_6510001 chr3R_6510001 RAL-907 1688 chr3R 6519097 6519137 chr3R 6519225 6519268 5 126 11.5 13.0 12.2 0.4 171 chr3R 6519097 intergenic not near genes chr3R 6519182 intergenic not near genes chr3R 6519268 intergenic not near genes chr3R_5_6515001 chr3R_6515001 RAL-907 1689 chr3R 6578888 6578904 chr3R 6579028 6579044 5 137 7.5 6.0 6.8 0.6 156 chr3R 6578888 intron dpr11 - chr3R 6578966 intron dpr11 - chr3R 6579044 intron dpr11 - chr3R_5_6575001 chr3R_6575001 RAL-907 1690 chr3R 6621864 6621882 chr3R 6621976 6621993 4 112 3.5 7.5 5.5 0.6 129 chr3R 6621864 intergenic not near genes chr3R 6621928 intergenic not near genes chr3R 6621993 intergenic not near genes chr3R_4_6620001 chr3R_6620001 RAL-907 1691 chr3R 6624242 6624281 chr3R 6624344 6624383 6 101 20.5 19.5 20.0 0.3 141 chr3R 6624242 intergenic not near genes chr3R 6624312 intergenic not near genes chr3R 6624383 intergenic not near genes chr3R_6_6620001 chr3R_6620001 RAL-907 1692 chr3R 6655746 6655781 chr3R 6656038 6656073 5 292 13.5 14.0 13.8 0.3 327 chr3R 6655746 exon Taf1 + chr3R 6655910 3` UTR Taf1 + chr3R 6656073 intergenic Taf1 +,CG1307 - chr3R_5_6655001 chr3R_6655001 RAL-907 1693 chr3R 6663594 6663630 chr3R 6663686 6663730 4 91 8.0 9.5 8.8 0.4 136 chr3R 6663594 intron lab - chr3R 6663662 intron lab - chr3R 6663730 intron lab - chr3R_4_6660001 chr3R_6660001 RAL-907 1694 chr3R 6670551 6670602 chr3R 6670680 6670705 8 125 8.0 8.0 8.0 0.9 154 chr3R 6670551 intron lab - chr3R 6670628 intron lab - chr3R 6670705 intron lab - chr3R_8_6670001 chr3R_6670001 RAL-907 1695 chr3R 6737501 6737529 chr3R 6739286 6739331 Doc 6 1799 0.5 2.0 1.2 2.7 1830 chr3R 6737501 intron pb - chr3R 6738416 intron pb - chr3R 6739331 intron pb - chr3R_6_6735001 chr3R_6735001 RAL-907 1696 chr3R 6740986 6741029 chr3R 6741089 6741132 7 103 15.5 14.5 15.0 0.4 146 chr3R 6740986 intron pb - chr3R 6741059 intron pb - chr3R 6741132 intron pb - chr3R_7_6740001 chr3R_6740001 RAL-907 1697 chr3R 6804187 6804229 chr3R 6804305 6804353 4 125 13.5 10.0 11.8 0.3 166 chr3R 6804187 intergenic not near genes chr3R 6804270 intergenic not near genes chr3R 6804353 intergenic not near genes chr3R_4_6800001 chr3R_6800001 RAL-907 1698 chr3R 6819618 6819659 chr3R 6819722 6819763 5 104 6.0 10.0 8.0 0.6 145 chr3R 6819618 intergenic not near genes chr3R 6819690 intergenic 7SLRNA:CR32864 -,7SLRNA:CR42652 - chr3R 6819763 intergenic 7SLRNA:CR32864 -,7SLRNA:CR42652 - chr3R_5_6815001 chr3R_6815001 RAL-907 1699 chr3R 6828014 6828036 chr3R 6828110 6828132 5 96 16.0 17.5 16.8 0.3 118 chr3R 6828014 intron Scr - chr3R 6828073 intron Scr - chr3R 6828132 intron Scr - chr3R_5_6825001 chr3R_6825001 RAL-907 1700 chr3R 6958913 6958950 chr3R 6959144 6959172 6 224 14.5 14.5 14.5 0.4 259 chr3R 6958913 intron Antp - chr3R 6959042 intron Antp - chr3R 6959172 intron Antp - chr3R_6_6955001 chr3R_6955001 RAL-907 1701 chr3R 6978863 6978894 chr3R 6978968 6978981 4 96 9.5 4.5 7.0 0.5 118 chr3R 6978863 intron Antp - chr3R 6978922 intron Antp - chr3R 6978981 intron Antp - chr3R_4_6975001 chr3R_6975001 RAL-907 1702 chr3R 7092767 7092790 chr3R 7093351 7093374 10 584 5.5 3.5 4.5 1.8 607 chr3R 7092767 3` UTR CR43685 - chr3R 7093070 intron CR43685 - chr3R 7093374 3` UTR CR43685 - chr3R_10_7090001 chr3R_7090001 RAL-907 1703 chr3R 7092792 7092812 chr3R 7093350 7093396 9 580 1.5 3.5 2.5 2.6 604 chr3R 7092792 3` UTR CR43685 - chr3R 7093094 intron CR43685 - chr3R 7093396 3` UTR CR43685 - chr3R_9_7090001 chr3R_7090001 RAL-907 1704 chr3R 7103302 7103311 chr3R 7103371 7103400 4 75 5.0 5.5 5.2 0.6 98 chr3R 7103302 intron Alh - chr3R 7103351 intron Alh - chr3R 7103400 intron Alh - chr3R_4_7100001 chr3R_7100001 RAL-907 1705 chr3R 7105311 7105351 chr3R 7105414 7105444 8 101 7.5 7.5 7.5 0.9 133 chr3R 7105311 intron Alh - chr3R 7105378 intron Alh - chr3R 7105444 intron Alh - chr3R_8_7105001 chr3R_7105001 RAL-907 1706 chr3R 7126483 7126526 chr3R 7126598 7126641 13 114 6.0 2.5 4.2 2.5 158 chr3R 7126483 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126562 3` UTR CG10068 - chr3R 7126641 3` UTR CG10068 - chr3R_13_7125001 chr3R_7125001 RAL-907 1707 chr3R 7132821 7132865 chr3R 7132932 7132966 6 108 7.0 9.0 8.0 0.7 145 chr3R 7132821 intergenic CG31493 + chr3R 7132894 intergenic CG31493 + chr3R 7132966 intergenic CG31493 + chr3R_6_7130001 chr3R_7130001 RAL-907 1708 chr3R 7173659 7173706 chr3R 7173759 7173806 12 100 3.5 7.5 5.5 1.8 147 chr3R 7173659 intron sas + chr3R 7173732 intron sas + chr3R 7173806 intron sas + chr3R_12_7170001 chr3R_7170001 RAL-907 1709 chr3R 7210575 7210616 chr3R 7210672 7210722 5 100 14.0 13.0 13.5 0.3 147 chr3R 7210575 intergenic not near genes chr3R 7210648 intergenic not near genes chr3R 7210722 intergenic not near genes chr3R_5_7210001 chr3R_7210001 RAL-907 1710 chr3R 7217441 7217483 chr3R 7217682 7217724 11 241 12.5 5.0 8.8 1.1 283 chr3R 7217441 intergenic CG14605 -,CG14606 - chr3R 7217582 intergenic CG14605 -,CG14606 - chr3R 7217724 3` UTR CG14605 - chr3R_11_7215001 chr3R_7215001 RAL-907 1711 chr3R 7269897 7269924 chr3R 7270011 7270023 6 111 8.0 6.0 7.0 0.8 126 chr3R 7269897 3` UTR Syt4 + chr3R 7269960 3` UTR Syt4 + chr3R 7270023 3` UTR Syt4 + chr3R_6_7265001 chr3R_7265001 RAL-907 1712 chr3R 7404941 7404970 chr3R 7405037 7405065 5 96 0.0 2.5 1.2 2.3 124 chr3R 7404941 intergenic not near genes chr3R 7405003 intergenic not near genes chr3R 7405065 intergenic not near genes chr3R_5_7405001 chr3R_7405001 RAL-907 1713 chr3R 7548581 7548626 chr3R 7548680 7548725 8 91 13.0 10.5 11.8 0.6 144 chr3R 7548581 intron alpha-Est1 - chr3R 7548653 intron alpha-Est1 - chr3R 7548725 intron alpha-Est1 - chr3R_8_7545001 chr3R_7545001 RAL-907 1714 chr3R 7639766 7639820 chr3R 7639927 7639943 4 145 11.0 11.0 11.0 0.3 177 chr3R 7639766 intergenic CG34127 - chr3R 7639854 intergenic CG34127 - chr3R 7639943 intergenic not near genes chr3R_4_7635001 chr3R_7635001 RAL-907 1715 chr3R 7677897 7677937 chr3R 7678030 7678049 8 129 13.0 16.5 14.8 0.5 152 chr3R 7677897 intron Nlg1 + chr3R 7677973 intron Nlg1 + chr3R 7678049 intron Nlg1 + chr3R_8_7675001 chr3R_7675001 RAL-907 1716 chr3R 7694560 7694609 chr3R 7713641 7713690 invader3 17 19080 3.5 4.5 4.0 3.4 19130 chr3R 7694560 3` UTR Nlg1 + chr3R 7704125 intergenic not near genes chr3R 7713690 intergenic not near genes chr3R_17_7700001 chr3R_7700001 RAL-907 1717 chr3R 7729459 7729478 chr3R 7737416 7737434 Stalker2 6 7957 5.0 4.5 4.8 1.0 7975 chr3R 7729459 intergenic not near genes chr3R 7733446 intergenic not near genes chr3R 7737434 intergenic not near genes chr3R_6_7730001 chr3R_7730001 RAL-907 1718 chr3R 7729482 7729496 chr3R 7737407 7737453 Stalker2 4 7949 2.5 3.5 3.0 1.0 7971 chr3R 7729482 intergenic not near genes chr3R 7733468 intergenic not near genes chr3R 7737453 intergenic not near genes chr3R_4_7730001 chr3R_7730001 RAL-907 1719 chr3R 7821703 7821719 chr3R 7821819 7821835 7 115 11.0 7.5 9.2 0.7 132 chr3R 7821703 intron CG34384 + chr3R 7821769 intron CG34384 + chr3R 7821835 intron CG34384 + chr3R_7_7820001 chr3R_7820001 RAL-907 1720 chr3R 7849621 7849673 chr3R 7850808 7850838 1360 12 1182 3.5 5.5 4.5 2.2 1217 chr3R 7849621 intron CG34384 + chr3R 7850230 intron CG34384 + chr3R 7850838 intron CG34384 + chr3R_12_7850001 chr3R_7850001 RAL-907 1721 chr3R 7902734 7902745 chr3R 7902977 7902988 6 243 9.0 3.5 6.2 0.8 254 chr3R 7902734 intergenic mRpS9 -,CG2943 - chr3R 7902861 intergenic CG2943 -,mRpS9 - chr3R 7902988 intergenic CG2943 -,mRpS9 - chr3R_6_7900001 chr3R_7900001 RAL-907 1722 chr3R 7951447 7951490 chr3R 7951566 7951609 10 119 14.0 14.5 14.2 0.7 162 chr3R 7951447 intron dsx - chr3R 7951528 intron dsx - chr3R 7951609 intron dsx - chr3R_10_7950001 chr3R_7950001 RAL-907 1723 chr3R 7955914 7955934 chr3R 7956011 7956031 6 97 9.0 5.5 7.2 0.7 117 chr3R 7955914 intron dsx - chr3R 7955972 intron dsx - chr3R 7956031 intron dsx - chr3R_6_7955001 chr3R_7955001 RAL-907 1724 chr3R 7965298 7965332 chr3R 7965406 7965435 4 106 13.5 13.0 13.2 0.3 137 chr3R 7965298 intron dsx - chr3R 7965366 intron dsx - chr3R 7965435 intron dsx - chr3R_4_7965001 chr3R_7965001 RAL-907 1725 chr3R 7973300 7973345 chr3R 7974382 7974429 1360 17 1083 3.5 3.0 3.2 4.0 1129 chr3R 7973300 intergenic not near genes chr3R 7973864 intergenic not near genes chr3R 7974429 3` UTR CD98hc - chr3R_17_7970001 chr3R_7970001 RAL-907 1726 chr3R 8049379 8049396 chr3R 8049582 8049603 4 202 8.5 4.0 6.2 0.6 224 chr3R 8049379 intron,exon CG43060 +,CG43618 + chr3R 8049491 intron CG43060 + chr3R 8049603 intron CG43060 + chr3R_4_8045001 chr3R_8045001 RAL-907 1727 chr3R 8090260 8090293 chr3R 8090457 8090490 13 197 10.0 12.0 11.0 1.1 230 chr3R 8090260 5` UTR CR44330 + chr3R 8090375 intergenic CR44330 + chr3R 8090490 intergenic CR44330 + chr3R_13_8090001 chr3R_8090001 RAL-907 1728 chr3R 8094392 8094421 chr3R 8099717 8099746 Transpac 9 5325 7.5 5.0 6.2 1.2 5354 chr3R 8094392 intron CG7900 + chr3R 8097069 intron CG7900 + chr3R 8099746 intron CG7900 + chr3R_9_8095001 chr3R_8095001 RAL-907 1729 chr3R 8094424 8094430 chr3R 8099714 8099755 Transpac 7 5320 3.5 4.5 4.0 1.4 5331 chr3R 8094424 intron CG7900 + chr3R 8097090 intron CG7900 + chr3R 8099755 intron CG7900 + chr3R_7_8095001 chr3R_8095001 RAL-907 1730 chr3R 8101763 8101784 chr3R 8104856 8104888 G2 5 3102 2.0 7.0 4.5 0.9 3125 chr3R 8101763 exon CG7900 + chr3R 8103326 intron CG7900 + chr3R 8104888 3` UTR CG7900 + chr3R_5_8100001 chr3R_8100001 RAL-907 1731 chr3R 8107371 8107411 chr3R 8107524 8107564 6 154 4.5 11.0 7.8 0.7 193 chr3R 8107371 intron puc + chr3R 8107468 intron puc + chr3R 8107564 intron puc + chr3R_6_8105001 chr3R_8105001 RAL-907 1732 chr3R 8182632 8182674 chr3R 8182746 8182759 9 108 8.5 7.0 7.8 1.0 127 chr3R 8182632 intergenic not near genes chr3R 8182696 intergenic not near genes chr3R 8182759 intergenic not near genes chr3R_9_8180001 chr3R_8180001 RAL-907 1733 chr3R 8188368 8188515 chr3R 8188473 8188626 12 103 6.5 9.5 8.0 1.3 258 chr3R 8188368 intergenic not near genes chr3R 8188497 intergenic not near genes chr3R 8188626 intergenic not near genes chr3R_12_8185001 chr3R_8185001 RAL-907 1734 chr3R 8339241 8339247 chr3R 21907534 21907536 5 13568289 15.0 13.0 14.0 0.3 13568295 chr3R 8339241 intergenic not near genes chr3R 15123388 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_5_15120001 chr3R_15120001 RAL-907 1735 chr3R 8376367 8376417 chr3R 8376744 8376799 7 382 26.0 24.0 25.0 0.3 432 chr3R 8376367 intron CG45263 - chr3R 8376583 intron CG45263 - chr3R 8376799 intron CG45263 - chr3R_7_8375001 chr3R_8375001 RAL-907 1736 chr3R 8402995 8403039 chr3R 8412172 8412211 roo 14 9170 2.5 7.0 4.8 2.4 9216 chr3R 8402995 intron CG45263 - chr3R 8407603 intron CG45263 - chr3R 8412211 intron CG45263 - chr3R_14_8405001 chr3R_8405001 RAL-907 1737 chr3R 8541338 8541369 chr3R 8541427 8541465 7 93 6.0 7.0 6.5 0.9 127 chr3R 8541338 intergenic not near genes chr3R 8541402 intergenic not near genes chr3R 8541465 intergenic not near genes chr3R_7_8540001 chr3R_8540001 RAL-907 1738 chr3R 8547124 8547152 chr3R 8547232 8547243 4 103 8.0 8.0 8.0 0.4 119 chr3R 8547124 5` UTR CR45574 + chr3R 8547184 5` UTR CR45574 + chr3R 8547243 5` UTR CR45574 + chr3R_4_8545001 chr3R_8545001 RAL-907 1739 chr3R 8570479 8570502 chr3R 8575114 8575136 HMS-Beagle 4 4636 2.5 2.5 2.5 1.1 4657 chr3R 8570479 intergenic not near genes chr3R 8572808 intergenic not near genes chr3R 8575136 intergenic not near genes chr3R_4_8570001 chr3R_8570001 RAL-907 1740 chr3R 8579064 8579118 chr3R 8579189 8579207 8 103 5.5 3.0 4.2 1.5 143 chr3R 8579064 intron 5-HT2B + chr3R 8579136 intron 5-HT2B + chr3R 8579207 intron 5-HT2B + chr3R_8_8575001 chr3R_8575001 RAL-907 1741 chr3R 8601762 8601800 chr3R 8610935 8610941 roo 6 9163 3.5 5.5 4.5 1.1 9179 chr3R 8601762 intron 5-HT2B + chr3R 8606352 intron 5-HT2B + chr3R 8610941 intron 5-HT2B + chr3R_6_8605001 chr3R_8605001 RAL-907 1742 chr3R 8636930 8636952 chr3R 8637237 8637275 6 319 8.0 4.5 6.2 0.8 345 chr3R 8636930 intergenic not near genes chr3R 8637102 intergenic not near genes chr3R 8637275 intergenic not near genes chr3R_6_8635001 chr3R_8635001 RAL-907 1743 chr3R 8684088 8684097 chr3R 8684185 8684194 4 97 10.0 10.5 10.2 0.4 106 chr3R 8684088 intron CR44937 - chr3R 8684141 intron CR44937 - chr3R 8684194 intron CR44937 - chr3R_4_8680001 chr3R_8680001 RAL-907 1744 chr3R 8707340 8707384 chr3R 8709801 8709844 jockey 8 2457 2.5 2.5 2.5 2.3 2504 chr3R 8707340 intergenic not near genes chr3R 8708592 intergenic not near genes chr3R 8709844 intergenic not near genes chr3R_8_8705001 chr3R_8705001 RAL-907 1745 chr3R 8745748 8745778 chr3R 8745858 8745909 8 125 13.5 16.0 14.8 0.5 161 chr3R 8745748 intron CG9801 - chr3R 8745828 intron CG9801 - chr3R 8745909 intron CG9801 - chr3R_8_8745001 chr3R_8745001 RAL-907 1746 chr3R 8756284 8756312 chr3R 8756369 8756408 4 93 10.5 14.5 12.5 0.3 124 chr3R 8756284 intron,intron CG11768 -,CG34135 - chr3R 8756346 intron,intron CG11768 -,CG34135 - chr3R 8756408 intron,intron CG11768 -,CG34135 - chr3R_4_8755001 chr3R_8755001 RAL-907 1747 chr3R 8865948 8865973 chr3R 8866090 8866102 4 139 7.5 3.5 5.5 0.6 154 chr3R 8865948 intron pyd - chr3R 8866025 intron pyd - chr3R 8866102 intron pyd - chr3R_4_8865001 chr3R_8865001 RAL-907 1748 chr3R 8894852 8894888 chr3R 8896028 8896055 1360 10 1173 9.0 7.5 8.2 1.1 1203 chr3R 8894852 intron pyd - chr3R 8895454 intron pyd - chr3R 8896055 intron pyd - chr3R_10_8895001 chr3R_8895001 RAL-907 1749 chr3R 8917868 8917900 chr3R 8917968 8917999 5 100 19.0 13.0 16.0 0.3 131 chr3R 8917868 intron pyd - chr3R 8917934 intron pyd - chr3R 8917999 intron pyd - chr3R_5_8915001 chr3R_8915001 RAL-907 1750 chr3R 8960560 8960600 chr3R 8960657 8960697 8 97 7.0 7.5 7.2 1.0 137 chr3R 8960560 intron CG11966 - chr3R 8960628 intron CG11966 - chr3R 8960697 intron CG11966 - chr3R_8_8960001 chr3R_8960001 RAL-907 1751 chr3R 8997356 8997383 chr3R 8997466 8997487 5 105 11.0 13.0 12.0 0.4 131 chr3R 8997356 intron CG31100 - chr3R 8997422 intron CG31100 - chr3R 8997487 intron CG31100 - chr3R_5_8995001 chr3R_8995001 RAL-907 1752 chr3R 9036359 9036402 chr3R 9036457 9036500 8 98 9.0 12.0 10.5 0.7 141 chr3R 9036359 intron neur - chr3R 9036430 intron neur - chr3R 9036500 intron neur - chr3R_8_9035001 chr3R_9035001 RAL-907 1753 chr3R 9083131 9083170 chr3R 9083236 9083236 5 93 6.0 7.5 6.8 0.6 105 chr3R 9083131 intron pum - chr3R 9083184 intron pum - chr3R 9083236 intron pum - chr3R_5_9080001 chr3R_9080001 RAL-907 1754 chr3R 9108844 9108882 chr3R 9108940 9108973 10 95 3.5 0.5 2.0 3.3 129 chr3R 9108844 intron pum - chr3R 9108908 intron pum - chr3R 9108973 intron pum - chr3R_10_9105001 chr3R_9105001 RAL-907 1755 chr3R 9149441 9149463 chr3R 9149541 9149563 4 100 6.0 2.0 4.0 0.8 122 chr3R 9149441 intron pum - chr3R 9149502 intron pum - chr3R 9149563 intron pum - chr3R_4_9145001 chr3R_9145001 RAL-907 1756 chr3R 9160175 9160202 chr3R 9160287 9160313 4 107 11.5 6.0 8.8 0.4 138 chr3R 9160175 intron pum - chr3R 9160244 intron pum - chr3R 9160313 intron pum - chr3R_4_9160001 chr3R_9160001 RAL-907 1757 chr3R 9203658 9203710 chr3R 9203814 9203855 14 151 7.5 9.0 8.2 1.5 197 chr3R 9203658 intron pum - chr3R 9203756 intron pum - chr3R 9203855 intron pum - chr3R_14_9200001 chr3R_9200001 RAL-907 1758 chr3R 9278770 9278808 chr3R 9284050 9284072 Rt1a 8 5277 5.0 9.5 7.2 1.0 5302 chr3R 9278770 intergenic not near genes chr3R 9281421 intergenic not near genes chr3R 9284072 intergenic not near genes chr3R_8_9280001 chr3R_9280001 RAL-907 1759 chr3R 9319560 9319606 chr3R 9320015 9320035 jockey 15 453 6.0 5.5 5.8 2.2 475 chr3R 9319560 intron CG8861 - chr3R 9319798 intron CG8861 - chr3R 9320035 intron CG8861 - chr3R_15_9315001 chr3R_9315001 RAL-907 1760 chr3R 9338577 9338608 chr3R 9338778 9338809 6 201 8.0 14.0 11.0 0.5 232 chr3R 9338577 3` UTR CR43301 - chr3R 9338693 intron CR43301 - chr3R 9338809 3` UTR CR43301 - chr3R_6_9335001 chr3R_9335001 RAL-907 1761 chr3R 9361815 9361845 chr3R 9362076 9362106 pogo 11 261 3.0 7.0 5.0 1.8 291 chr3R 9361815 3` UTR CG45050 + chr3R 9361960 3` UTR CG45050 + chr3R 9362106 3` UTR CG45050 + chr3R_11_9360001 chr3R_9360001 RAL-907 1762 chr3R 9379127 9379170 chr3R 9379229 9379272 5 99 0.0 1.0 0.5 3.3 145 chr3R 9379127 intron FER - chr3R 9379200 intron FER - chr3R 9379272 intron FER - chr3R_5_9375001 chr3R_9375001 RAL-907 1763 chr3R 9447443 9447460 chr3R 9447567 9447584 4 123 3.5 7.0 5.2 0.6 141 chr3R 9447443 intron ps + chr3R 9447514 intron ps + chr3R 9447584 intron ps + chr3R_4_9445001 chr3R_9445001 RAL-907 1764 chr3R 9478824 9478853 chr3R 9478949 9478994 4 136 9.0 10.5 9.8 0.4 170 chr3R 9478824 intron CG16779 - chr3R 9478909 intron CG16779 - chr3R 9478994 intron CG16779 - chr3R_4_9475001 chr3R_9475001 RAL-907 1765 chr3R 9601460 9601485 chr3R 9601593 9601623 4 136 10.5 14.5 12.5 0.3 163 chr3R 9601460 intron CG8312 + chr3R 9601542 intron CG8312 + chr3R 9601623 intron CG8312 + chr3R_4_9600001 chr3R_9600001 RAL-907 1766 chr3R 9644566 9644609 chr3R 9644667 9644710 6 101 8.5 10.0 9.2 0.6 144 chr3R 9644566 intron Dh44 + chr3R 9644638 intron Dh44 + chr3R 9644710 intron Dh44 + chr3R_6_9640001 chr3R_9640001 RAL-907 1767 chr3R 9898773 9898813 chr3R 9898884 9898924 4 111 6.5 5.0 5.8 0.6 151 chr3R 9898773 intron Glut4EF + chr3R 9898848 intron Glut4EF + chr3R 9898924 intron Glut4EF + chr3R_4_9895001 chr3R_9895001 RAL-907 1768 chr3R 9936868 9936908 chr3R 9936949 9936980 7 82 1.5 0.0 0.8 3.9 112 chr3R 9936868 intron Glut4EF + chr3R 9936924 intron Glut4EF + chr3R 9936980 intron Glut4EF + chr3R_7_9935001 chr3R_9935001 RAL-907 1769 chr3R 10073764 10073801 chr3R 10073893 10073929 7 129 15.0 18.5 16.8 0.4 165 chr3R 10073764 intergenic nerfin-2 +,CG5361 - chr3R 10073846 3` UTR CG5361 - chr3R 10073929 exon CG5361 - chr3R_7_10070001 chr3R_10070001 RAL-907 1770 chr3R 10183089 10183107 chr3R 10183186 10183204 5 97 13.5 13.5 13.5 0.3 115 chr3R 10183089 intron CG12814 - chr3R 10183146 intron CG12814 - chr3R 10183204 intron CG12814 - chr3R_5_10180001 chr3R_10180001 RAL-907 1771 chr3R 10231148 10231171 chr3R 10231615 10231660 4 479 10.5 15.5 13.0 0.3 512 chr3R 10231148 intron CG42795 + chr3R 10231404 intron CG42795 + chr3R 10231660 intron CG42795 + chr3R_4_10230001 chr3R_10230001 RAL-907 1772 chr3R 10231769 10231805 chr3R 10237366 10237379 mdg3 10 5595 5.0 2.5 3.8 2.1 5610 chr3R 10231769 intron CG42795 + chr3R 10234574 intron CG42795 + chr3R 10237379 intron CG42795 + chr3R_10_10230001 chr3R_10230001 RAL-907 1773 chr3R 10255368 10255380 chr3R 10260823 10260840 I-element 8 5459 5.5 4.0 4.8 1.4 5472 chr3R 10255368 3` UTR Sirt6 - chr3R 10258104 intron Sirt6 - chr3R 10260840 exon Sirt6 - chr3R_8_10255001 chr3R_10255001 RAL-907 1774 chr3R 10306951 10306998 chr3R 10312190 10312245 8 5244 20.0 22.5 21.2 0.4 5294 chr3R 10306951 exon CG43143 + chr3R 10309598 exon CG6293 - chr3R 10312245 3` UTR Bruce - chr3R_8_10305001 chr3R_10305001 RAL-907 1775 chr3R 10394054 10394100 chr3R 10394173 10394219 8 118 9.5 7.5 8.5 0.8 165 chr3R 10394054 intron cwo + chr3R 10394136 intron cwo + chr3R 10394219 intron cwo + chr3R_8_10390001 chr3R_10390001 RAL-907 1776 chr3R 10430656 10430704 chr3R 10430765 10430813 6 107 7.5 8.0 7.8 0.7 157 chr3R 10430656 intergenic not near genes chr3R 10430734 intergenic not near genes chr3R 10430813 intergenic not near genes chr3R_6_10430001 chr3R_10430001 RAL-907 1777 chr3R 10651793 10651825 chr3R 10651912 10651944 10 118 6.0 3.0 4.5 1.8 151 chr3R 10651793 intergenic not near genes chr3R 10651868 intergenic not near genes chr3R 10651944 intergenic not near genes chr3R_10_10650001 chr3R_10650001 RAL-907 1778 chr3R 10723745 10723786 chr3R 10723857 10723898 6 112 15.0 10.0 12.5 0.4 153 chr3R 10723745 intergenic not near genes chr3R 10723822 intergenic not near genes chr3R 10723898 intergenic not near genes chr3R_6_10720001 chr3R_10720001 RAL-907 1779 chr3R 10727638 10727672 chr3R 10727722 10727766 5 90 10.0 7.5 8.8 0.5 128 chr3R 10727638 intergenic not near genes chr3R 10727702 intergenic not near genes chr3R 10727766 intergenic not near genes chr3R_5_10725001 chr3R_10725001 RAL-907 1780 chr3R 10732311 10732336 chr3R 10733203 10733228 7 892 12.5 11.0 11.8 0.5 917 chr3R 10732311 intergenic not near genes chr3R 10732770 intergenic not near genes chr3R 10733228 intergenic not near genes chr3R_7_10730001 chr3R_10730001 RAL-907 1781 chr3R 10780191 10780210 chr3R 10780314 10780320 4 116 15.5 15.0 15.2 0.2 129 chr3R 10780191 exon Desi + chr3R 10780256 intron Desi + chr3R 10780320 exon Desi + chr3R_4_10780001 chr3R_10780001 RAL-907 1782 chr3R 10804164 10804205 chr3R 10811716 10811747 17.6 6 7548 10.0 8.0 9.0 0.6 7583 chr3R 10804164 intergenic CG14692 - chr3R 10807956 intergenic not near genes chr3R 10811747 3` UTR CG14693 - chr3R_6_10805001 chr3R_10805001 RAL-907 1783 chr3R 10870847 10870893 chr3R 10870948 10870994 6 100 5.5 8.0 6.8 0.8 147 chr3R 10870847 intergenic Fdh -,Tsp86D + chr3R 10870920 3` UTR Fdh - chr3R 10870994 3` UTR Fdh - chr3R_6_10870001 chr3R_10870001 RAL-907 1784 chr3R 10904893 10904935 chr3R 10905117 10905154 7 221 4.0 2.0 3.0 1.8 261 chr3R 10904893 intergenic not near genes chr3R 10905024 intergenic not near genes chr3R 10905154 intergenic not near genes chr3R_7_10905001 chr3R_10905001 RAL-907 1785 chr3R 10920047 10920075 chr3R 10920145 10920173 8 98 11.0 12.5 11.8 0.6 126 chr3R 10920047 intergenic not near genes chr3R 10920110 intergenic not near genes chr3R 10920173 intergenic not near genes chr3R_8_10920001 chr3R_10920001 RAL-907 1786 chr3R 10963549 10963578 chr3R 10963662 10963664 5 106 6.5 10.0 8.2 0.5 115 chr3R 10963549 intergenic not near genes chr3R 10963606 intergenic not near genes chr3R 10963664 intergenic not near genes chr3R_5_10960001 chr3R_10960001 RAL-907 1787 chr3R 10971476 10971506 chr3R 10971587 10971617 4 111 11.5 10.5 11.0 0.3 141 chr3R 10971476 intergenic not near genes chr3R 10971546 intergenic not near genes chr3R 10971617 intergenic not near genes chr3R_4_10970001 chr3R_10970001 RAL-907 1788 chr3R 10987914 10987944 chr3R 10988025 10988055 11 111 15.5 13.0 14.2 0.7 141 chr3R 10987914 intron CG34114 + chr3R 10987984 intron CG34114 + chr3R 10988055 intron CG34114 + chr3R_11_10985001 chr3R_10985001 RAL-907 1789 chr3R 11065567 11065618 chr3R 11071243 11071290 297 11 5671 3.5 6.0 4.8 1.9 5723 chr3R 11065567 intergenic not near genes chr3R 11068428 intergenic not near genes chr3R 11071290 intergenic not near genes chr3R_11_11065001 chr3R_11065001 RAL-907 1790 chr3R 11098378 11098398 chr3R 11098888 11098902 6 511 8.5 7.0 7.8 0.7 524 chr3R 11098378 intergenic not near genes chr3R 11098640 intergenic not near genes chr3R 11098902 intergenic not near genes chr3R_6_11095001 chr3R_11095001 RAL-907 1791 chr3R 11102317 11102342 chr3R 11102405 11102443 4 94 9.0 7.0 8.0 0.4 126 chr3R 11102317 intergenic not near genes chr3R 11102380 intergenic not near genes chr3R 11102443 intergenic not near genes chr3R_4_11100001 chr3R_11100001 RAL-907 1792 chr3R 11197974 11198011 chr3R 11198090 11198115 5 115 2.0 1.5 1.8 1.8 141 chr3R 11197974 intron cu + chr3R 11198044 intron cu + chr3R 11198115 intron cu + chr3R_5_11195001 chr3R_11195001 RAL-907 1793 chr3R 11220088 11220310 chr3R 11220173 11220448 10 131 3.0 2.5 2.8 2.6 360 chr3R 11220088 intergenic CG6689 -,CG6693 - chr3R 11220268 3` UTR CG6693 - chr3R 11220448 3` UTR CG6693 - chr3R_10_11220001 chr3R_11220001 RAL-907 1794 chr3R 11379219 11379255 chr3R 11388394 11388425 roo 7 9173 4.5 3.5 4.0 1.4 9206 chr3R 11379219 intron pros + chr3R 11383822 intron pros + chr3R 11388425 intron pros + chr3R_7_11380001 chr3R_11380001 RAL-907 1795 chr3R 11404922 11404955 chr3R 11405022 11405055 4 96 14.0 13.0 13.5 0.3 133 chr3R 11404922 3` UTR pros + chr3R 11404988 3` UTR pros + chr3R 11405055 3` UTR pros + chr3R_4_11400001 chr3R_11400001 RAL-907 1796 chr3R 11476942 11476965 chr3R 11477064 11477087 6 122 8.0 11.5 9.8 0.6 145 chr3R 11476942 intergenic not near genes chr3R 11477014 intergenic not near genes chr3R 11477087 intergenic not near genes chr3R_6_11475001 chr3R_11475001 RAL-907 1797 chr3R 11664770 11664821 chr3R 11664882 11664912 16 108 1.5 7.5 4.5 2.9 142 chr3R 11664770 intron CG42327 + chr3R 11664841 intron CG42327 + chr3R 11664912 intron CG42327 + chr3R_16_11660001 chr3R_11660001 RAL-907 1798 chr3R 11694704 11694753 chr3R 11694817 11694840 25 109 4.0 5.0 4.5 4.5 136 chr3R 11694704 intergenic Fer3 - chr3R 11694772 intergenic Fer3 - chr3R 11694840 intergenic not near genes chr3R_25_11690001 chr3R_11690001 RAL-907 1799 chr3R 11734168 11734180 chr3R 11734305 11734319 4 138 3.5 3.0 3.2 1.0 151 chr3R 11734168 intergenic not near genes chr3R 11734244 intergenic not near genes chr3R 11734319 intergenic not near genes chr3R_4_11730001 chr3R_11730001 RAL-907 1800 chr3R 11740435 11740461 chr3R 11743522 11743574 16 3089 26.0 24.5 25.2 0.6 3139 chr3R 11740435 exon Blm - chr3R 11742004 5` UTR CG14722 + chr3R 11743574 exon CG14722 + chr3R_16_11740001 chr3R_11740001 RAL-907 1801 chr3R 11841077 11841091 chr3R 11846282 11846284 BS 4 5203 1.0 11.0 6.0 0.6 5207 chr3R 11841077 intron CG6959 - chr3R 11843680 intron CG6959 - chr3R 11846284 intron CG6959 - chr3R_4_11840001 chr3R_11840001 RAL-907 1802 chr3R 11853431 11853465 chr3R 11853600 11853632 11 166 0.5 6.5 3.5 2.4 201 chr3R 11853431 intron CG6959 - chr3R 11853532 intron CG6959 - chr3R 11853632 intron CG6959 - chr3R_11_11850001 chr3R_11850001 RAL-907 1803 chr3R 11853468 11853472 chr3R 11853587 11853606 4 140 0.5 5.0 2.8 1.1 138 chr3R 11853468 intron CG6959 - chr3R 11853537 intron CG6959 - chr3R 11853606 intron CG6959 - chr3R_4_11850001 chr3R_11850001 RAL-907 1804 chr3R 11853763 11853799 chr3R 11853888 11853924 8 125 6.0 6.0 6.0 1.1 161 chr3R 11853763 intron CG6959 - chr3R 11853844 intron CG6959 - chr3R 11853924 intron CG6959 - chr3R_8_11850001 chr3R_11850001 RAL-907 1805 chr3R 11920974 11920999 chr3R 11921071 11921114 4 99 7.5 11.5 9.5 0.4 140 chr3R 11920974 intron Cad87A - chr3R 11921044 intron Cad87A - chr3R 11921114 intron Cad87A - chr3R_4_11920001 chr3R_11920001 RAL-907 1806 chr3R 11957837 11957847 chr3R 11958140 11958150 S-element 5 303 9.5 0.0 4.8 0.9 313 chr3R 11957837 intergenic not near genes chr3R 11957994 intergenic not near genes chr3R 11958150 intergenic not near genes chr3R_5_11955001 chr3R_11955001 RAL-907 1807 chr3R 12022875 12022916 chr3R 12025064 12025113 pogo 9 2190 0.5 3.0 1.8 3.2 2238 chr3R 12022875 intergenic not near genes chr3R 12023994 intergenic not near genes chr3R 12025113 intergenic not near genes chr3R_9_12020001 chr3R_12020001 RAL-907 1808 chr3R 12045155 12045202 chr3R 12045251 12045298 5 96 7.5 7.0 7.2 0.6 143 chr3R 12045155 intergenic not near genes chr3R 12045226 intergenic not near genes chr3R 12045298 intergenic not near genes chr3R_5_12045001 chr3R_12045001 RAL-907 1809 chr3R 12081994 12082029 chr3R 12082073 12082077 16 84 0.5 2.5 1.5 6.4 83 chr3R 12081994 intron CG14741 - chr3R 12082036 intron CG14741 - chr3R 12082077 intron CG14741 - chr3R_16_12080001 chr3R_12080001 RAL-907 1810 chr3R 12134964 12134980 chr3R 12135106 12135138 5 155 8.0 4.5 6.2 0.7 174 chr3R 12134964 intergenic not near genes chr3R 12135051 intergenic not near genes chr3R 12135138 intergenic not near genes chr3R_5_12135001 chr3R_12135001 RAL-907 1811 chr3R 12154030 12154081 chr3R 12154446 12154487 6 422 25.0 13.0 19.0 0.3 457 chr3R 12154030 intron dpr15 - chr3R 12154258 intron dpr15 - chr3R 12154487 intron dpr15 - chr3R_6_12150001 chr3R_12150001 RAL-907 1812 chr3R 12183162 12183203 chr3R 12183268 12183309 7 95 9.0 9.5 9.2 0.7 147 chr3R 12183162 intergenic not near genes chr3R 12183236 intergenic not near genes chr3R 12183309 intergenic not near genes chr3R_7_12180001 chr3R_12180001 RAL-907 1813 chr3R 12267842 12267886 chr3R 12267942 12267986 10 100 8.5 7.0 7.8 1.1 144 chr3R 12267842 intron svp + chr3R 12267914 intron svp + chr3R 12267986 intron svp + chr3R_10_12265001 chr3R_12265001 RAL-907 1814 chr3R 12314210 12314244 chr3R 12314344 12314378 6 132 16.0 9.5 12.8 0.4 168 chr3R 12314210 intergenic not near genes chr3R 12314294 intergenic not near genes chr3R 12314378 intergenic not near genes chr3R_6_12310001 chr3R_12310001 RAL-907 1815 chr3R 12321957 12322002 chr3R 12322056 12322087 4 96 7.0 9.5 8.2 0.4 130 chr3R 12321957 intergenic not near genes chr3R 12322022 intergenic not near genes chr3R 12322087 intergenic not near genes chr3R_4_12320001 chr3R_12320001 RAL-907 1816 chr3R 12344117 12344155 chr3R 12344214 12344252 6 94 7.0 8.5 7.8 0.7 135 chr3R 12344117 intergenic not near genes chr3R 12344184 intergenic not near genes chr3R 12344252 intergenic not near genes chr3R_6_12340001 chr3R_12340001 RAL-907 1817 chr3R 12516045 12516084 chr3R 12516160 12516199 8 115 9.5 13.0 11.2 0.7 154 chr3R 12516045 intron Octbeta3R - chr3R 12516122 intron Octbeta3R - chr3R 12516199 intron Octbeta3R - chr3R_8_12515001 chr3R_12515001 RAL-907 1818 chr3R 12599371 12599387 chr3R 12599464 12599489 4 100 7.5 10.5 9.0 0.4 118 chr3R 12599371 intergenic not near genes chr3R 12599430 intergenic not near genes chr3R 12599489 intergenic not near genes chr3R_4_12595001 chr3R_12595001 RAL-907 1819 chr3R 12665844 12665883 chr3R 12665935 12665961 5 84 5.5 7.0 6.2 0.7 117 chr3R 12665844 intron CG14395 + chr3R 12665902 intron CG14395 + chr3R 12665961 intron CG14395 + chr3R_5_12665001 chr3R_12665001 RAL-907 1820 chr3R 12720710 12720756 chr3R 12720900 12720946 7 189 10.0 7.0 8.5 0.7 236 chr3R 12720710 intron Men - chr3R 12720828 intron Men - chr3R 12720946 intron Men - chr3R_7_12720001 chr3R_12720001 RAL-907 1821 chr3R 12735797 12735828 chr3R 12735910 12735946 6 116 9.0 11.0 10.0 0.5 149 chr3R 12735797 intergenic not near genes chr3R 12735872 intergenic not near genes chr3R 12735946 intergenic not near genes chr3R_6_12735001 chr3R_12735001 RAL-907 1822 chr3R 12763114 12763155 chr3R 12763211 12763252 15 96 0.5 4.0 2.2 4.7 138 chr3R 12763114 intron beat-Vc - chr3R 12763183 intron beat-Vc - chr3R 12763252 intron beat-Vc - chr3R_15_12760001 chr3R_12760001 RAL-907 1823 chr3R 12766419 12766441 chr3R 12766493 12766540 5 85 2.5 2.0 2.2 1.6 121 chr3R 12766419 intron beat-Vc - chr3R 12766480 intron beat-Vc - chr3R 12766540 intron beat-Vc - chr3R_5_12765001 chr3R_12765001 RAL-907 1824 chr3R 12778472 12778522 chr3R 12778573 12778623 9 101 9.5 12.0 10.8 0.8 151 chr3R 12778472 intron beat-Vc - chr3R 12778548 intron beat-Vc - chr3R 12778623 intron beat-Vc - chr3R_9_12775001 chr3R_12775001 RAL-907 1825 chr3R 12787937 12787948 chr3R 12788040 12788051 4 101 16.0 15.5 15.8 0.2 114 chr3R 12787937 intergenic not near genes chr3R 12787994 intergenic not near genes chr3R 12788051 intergenic not near genes chr3R_4_12785001 chr3R_12785001 RAL-907 1826 chr3R 12805834 12805884 chr3R 12805940 12805962 10 103 14.0 11.5 12.8 0.7 128 chr3R 12805834 intergenic not near genes chr3R 12805898 intergenic not near genes chr3R 12805962 intergenic not near genes chr3R_10_12805001 chr3R_12805001 RAL-907 1827 chr3R 12850483 12850503 chr3R 12850942 12850962 4 455 9.5 7.5 8.5 0.4 479 chr3R 12850483 3` UTR CR44234 - chr3R 12850722 intergenic CR44234 - chr3R 12850962 intergenic CR44234 - chr3R_4_12850001 chr3R_12850001 RAL-907 1828 chr3R 12850507 12850516 chr3R 12850941 12850949 4 437 8.0 7.5 7.8 0.5 442 chr3R 12850507 3` UTR CR44234 - chr3R 12850728 intergenic CR44234 - chr3R 12850949 intergenic CR44234 - chr3R_4_12850001 chr3R_12850001 RAL-907 1829 chr3R 12858439 12858483 chr3R 12859475 12859512 8 1034 10.0 15.0 12.5 0.6 1073 chr3R 12858439 intron CG10126 - chr3R 12858976 intron CG10126 - chr3R 12859512 intergenic CG10126 - chr3R_8_12855001 chr3R_12855001 RAL-907 1830 chr3R 12864542 12864589 chr3R 12865047 12865094 roo 15 504 3.5 3.0 3.2 3.6 552 chr3R 12864542 intergenic not near genes chr3R 12864818 intergenic not near genes chr3R 12865094 intergenic not near genes chr3R_15_12860001 chr3R_12860001 RAL-907 1831 chr3R 12866469 12866503 chr3R 12866640 12866674 5 171 5.5 7.5 6.5 0.7 205 chr3R 12866469 intergenic not near genes chr3R 12866572 intergenic not near genes chr3R 12866674 intergenic not near genes chr3R_5_12865001 chr3R_12865001 RAL-907 1832 chr3R 12972537 12972576 chr3R 12972696 12972735 9 157 16.5 9.0 12.8 0.7 198 chr3R 12972537 intron CG7381 - chr3R 12972636 intron CG7381 - chr3R 12972735 intron CG7381 - chr3R_9_12970001 chr3R_12970001 RAL-907 1833 chr3R 13061860 13061901 chr3R 13061975 13062016 9 115 18.0 17.0 17.5 0.5 156 chr3R 13061860 intron sim + chr3R 13061938 intron sim + chr3R 13062016 intron sim + chr3R_9_13060001 chr3R_13060001 RAL-907 1834 chr3R 13066984 13066995 chr3R 13067091 13067102 5 107 4.0 2.5 3.2 1.2 118 chr3R 13066984 intron sim + chr3R 13067043 intron sim + chr3R 13067102 intron sim + chr3R_5_13065001 chr3R_13065001 RAL-907 1835 chr3R 13075338 13075388 chr3R 13075439 13075489 9 99 3.5 1.0 2.2 2.8 151 chr3R 13075338 intron sim + chr3R 13075414 intron sim + chr3R 13075489 intron sim + chr3R_9_13075001 chr3R_13075001 RAL-907 1836 chr3R 13135824 13135852 chr3R 13138009 13138037 pogo 4 2185 3.0 5.0 4.0 0.8 2213 chr3R 13135824 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136930 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138037 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_4_13135001 chr3R_13135001 RAL-907 1837 chr3R 13143025 13143065 chr3R 13148621 13148645 mdg3 8 5588 2.5 9.5 6.0 1.1 5620 chr3R 13143025 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145835 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148645 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_8_13145001 chr3R_13145001 RAL-907 1838 chr3R 13248639 13248673 chr3R 13248758 13248792 6 119 11.5 11.0 11.2 0.5 153 chr3R 13248639 intron Ace - chr3R 13248716 intron Ace - chr3R 13248792 intron Ace - chr3R_6_13245001 chr3R_13245001 RAL-907 1839 chr3R 13272041 13272078 chr3R 13272141 13272183 6 104 8.5 10.5 9.5 0.6 142 chr3R 13272041 intergenic CG8449 - chr3R 13272112 intergenic CG8449 - chr3R 13272183 intergenic CG8449 - chr3R_6_13270001 chr3R_13270001 RAL-907 1840 chr3R 13274207 13274243 chr3R 13274300 13274340 5 97 9.5 13.0 11.2 0.4 133 chr3R 13274207 intergenic not near genes chr3R 13274274 intergenic not near genes chr3R 13274340 intergenic not near genes chr3R_5_13270001 chr3R_13270001 RAL-907 1841 chr3R 13305639 13305686 chr3R 13305746 13305793 13 106 23.0 15.5 19.2 0.6 154 chr3R 13305639 intron CG32473 + chr3R 13305716 intron CG32473 + chr3R 13305793 intron CG32473 + chr3R_13_13305001 chr3R_13305001 RAL-907 1842 chr3R 13306113 13306149 chr3R 13306520 13306551 7 406 6.0 9.0 7.5 0.8 438 chr3R 13306113 intron CG32473 + chr3R 13306332 intron CG32473 + chr3R 13306551 intron CG32473 + chr3R_7_13305001 chr3R_13305001 RAL-907 1843 chr3R 13314085 13314119 chr3R 13318893 13318925 Doc 7 4807 2.5 4.5 3.5 1.6 4840 chr3R 13314085 intergenic not near genes chr3R 13316505 intergenic not near genes chr3R 13318925 intergenic CG45080 - chr3R_7_13315001 chr3R_13315001 RAL-907 1844 chr3R 13356070 13356106 chr3R 13356175 13356211 9 104 9.0 9.0 9.0 0.9 141 chr3R 13356070 intergenic not near genes chr3R 13356140 intergenic not near genes chr3R 13356211 intergenic not near genes chr3R_9_13355001 chr3R_13355001 RAL-907 1845 chr3R 13364620 13364645 chr3R 13364724 13364749 4 104 13.0 7.0 10.0 0.4 129 chr3R 13364620 intron poly - chr3R 13364684 intron poly - chr3R 13364749 intron poly - chr3R_4_13360001 chr3R_13360001 RAL-907 1846 chr3R 13418650 13418677 chr3R 13418744 13418768 4 94 12.5 14.0 13.2 0.3 118 chr3R 13418650 intergenic not near genes chr3R 13418709 intergenic not near genes chr3R 13418768 intergenic not near genes chr3R_4_13415001 chr3R_13415001 RAL-907 1847 chr3R 13435206 13435417 chr3R 13435361 13435611 13 185 2.0 3.5 2.8 3.4 405 chr3R 13435206 intergenic yrt - chr3R 13435408 intergenic yrt - chr3R 13435611 intergenic not near genes chr3R_13_13435001 chr3R_13435001 RAL-907 1848 chr3R 13450087 13450102 chr3R 13450227 13450273 5 160 7.5 6.0 6.8 0.6 186 chr3R 13450087 intergenic not near genes chr3R 13450180 intergenic CG14372 + chr3R 13450273 intergenic CG14372 + chr3R_5_13450001 chr3R_13450001 RAL-907 1849 chr3R 13517205 13517252 chr3R 13520042 13520088 jockey 4 2837 6.0 0.0 3.0 1.0 2883 chr3R 13517205 intergenic not near genes chr3R 13518646 intergenic not near genes chr3R 13520088 intergenic not near genes chr3R_4_13515001 chr3R_13515001 RAL-907 1850 chr3R 13599068 13599205 chr3R 13599175 13599336 10 109 10.0 8.5 9.2 1.0 268 chr3R 13599068 intergenic not near genes chr3R 13599202 intergenic not near genes chr3R 13599336 intergenic not near genes chr3R_10_13595001 chr3R_13595001 RAL-907 1851 chr3R 13603037 13603073 chr3R 13603148 13603184 6 110 0.5 2.5 1.5 2.4 147 chr3R 13603037 intergenic not near genes chr3R 13603110 intergenic not near genes chr3R 13603184 intergenic not near genes chr3R_6_13600001 chr3R_13600001 RAL-907 1852 chr3R 13604045 13604086 chr3R 13604300 13604341 4 255 11.0 8.5 9.8 0.4 296 chr3R 13604045 intergenic not near genes chr3R 13604193 intergenic not near genes chr3R 13604341 intergenic not near genes chr3R_4_13600001 chr3R_13600001 RAL-907 1853 chr3R 13609561 13609571 chr3R 13609675 13609685 4 114 3.0 9.5 6.2 0.6 124 chr3R 13609561 intergenic CG9759 - chr3R 13609623 intergenic CG9759 - chr3R 13609685 intergenic CG9759 - chr3R_4_13605001 chr3R_13605001 RAL-907 1854 chr3R 13625701 13625712 chr3R 13625802 13625813 5 101 15.0 17.5 16.2 0.3 112 chr3R 13625701 intergenic not near genes chr3R 13625757 intergenic not near genes chr3R 13625813 intergenic not near genes chr3R_5_13625001 chr3R_13625001 RAL-907 1855 chr3R 13659824 13659836 chr3R 13659933 13659945 4 109 0.0 3.0 1.5 1.6 121 chr3R 13659824 intron Hrb87F - chr3R 13659884 intron Hrb87F - chr3R 13659945 intron Hrb87F - chr3R_4_13655001 chr3R_13655001 RAL-907 1856 chr3R 13672925 13672972 chr3R 13673022 13673070 19 97 0.5 5.0 2.8 5.0 145 chr3R 13672925 intron Task6 - chr3R 13672998 intron Task6 - chr3R 13673070 intron Task6 - chr3R_19_13670001 chr3R_13670001 RAL-907 1857 chr3R 13765264 13765282 chr3R 13765367 13765383 4 103 2.0 6.0 4.0 0.8 119 chr3R 13765264 intergenic CG9312 + chr3R 13765324 intergenic CG9312 + chr3R 13765383 intergenic CG9312 + chr3R_4_13765001 chr3R_13765001 RAL-907 1858 chr3R 13853939 13853986 chr3R 13854037 13854056 4 91 6.0 5.5 5.8 0.6 117 chr3R 13853939 intergenic not near genes chr3R 13853998 intergenic not near genes chr3R 13854056 intergenic not near genes chr3R_4_13850001 chr3R_13850001 RAL-907 1859 chr3R 13916306 13916338 chr3R 13916411 13916443 8 97 7.0 8.0 7.5 0.9 137 chr3R 13916306 intergenic not near genes chr3R 13916374 intergenic not near genes chr3R 13916443 intergenic not near genes chr3R_8_13915001 chr3R_13915001 RAL-907 1860 chr3R 13926329 13926373 chr3R 13926435 13926479 6 106 4.0 0.0 2.0 2.0 150 chr3R 13926329 intergenic not near genes chr3R 13926404 intergenic not near genes chr3R 13926479 intergenic not near genes chr3R_6_13925001 chr3R_13925001 RAL-907 1861 chr3R 13957367 13957391 chr3R 13957563 13957593 5 195 10.5 3.5 7.0 0.6 226 chr3R 13957367 intergenic not near genes chr3R 13957480 intergenic not near genes chr3R 13957593 intergenic not near genes chr3R_5_13955001 chr3R_13955001 RAL-907 1862 chr3R 13974531 13974535 chr3R 13974628 13974632 5 97 0.5 15.0 7.8 0.6 101 chr3R 13974531 intron,5` UTR rdx -,CR43460 + chr3R 13974582 intron,5` UTR rdx -,CR43460 + chr3R 13974632 intron,5` UTR rdx -,CR43460 + chr3R_5_13970001 chr3R_13970001 RAL-907 1863 chr3R 13975356 13975387 chr3R 13975456 13975475 7 98 14.0 9.5 11.8 0.5 119 chr3R 13975356 intron rdx - chr3R 13975416 intron rdx - chr3R 13975475 intron rdx - chr3R_7_13975001 chr3R_13975001 RAL-907 1864 chr3R 14021625 14021678 chr3R 14023470 14023515 S-element 11 1838 2.0 7.5 4.8 1.9 1890 chr3R 14021625 intron rdx - chr3R 14022570 intron rdx - chr3R 14023515 intron rdx - chr3R_11_14020001 chr3R_14020001 RAL-907 1865 chr3R 14035299 14035331 chr3R 14035400 14035432 5 101 3.5 6.5 5.0 0.8 133 chr3R 14035299 intron CG9922 - chr3R 14035366 intron CG9922 - chr3R 14035432 intron CG9922 - chr3R_5_14035001 chr3R_14035001 RAL-907 1866 chr3R 14062149 14062196 chr3R 14062245 14062292 5 95 10.5 9.5 10.0 0.5 143 chr3R 14062149 intron foxo + chr3R 14062220 intron foxo + chr3R 14062292 intron foxo + chr3R_5_14060001 chr3R_14060001 RAL-907 1867 chr3R 14067126 14067156 chr3R 14067224 14067255 8 99 9.5 9.5 9.5 0.8 129 chr3R 14067126 exon foxo + chr3R 14067190 intron foxo + chr3R 14067255 intron foxo + chr3R_8_14065001 chr3R_14065001 RAL-907 1868 chr3R 7773344 7773344 chr3R 14104440 14104440 8 6331096 16.5 3.5 10.0 0.7 6331096 chr3R 7773344 intergenic not near genes chr3R 10938892 intergenic not near genes chr3R 14104440 intergenic CG12402 - chr3R_8_10935001 chr3R_10935001 RAL-907 1869 chr3R 14109063 14109111 chr3R 14109164 14109212 12 98 2.5 0.5 1.5 4.8 149 chr3R 14109063 intergenic CR44237 -,Or88a + chr3R 14109138 intergenic CR44237 -,Or88a + chr3R 14109212 intergenic CR44237 -,Or88a + chr3R_12_14105001 chr3R_14105001 RAL-907 1870 chr3R 14117430 14117468 chr3R 14117518 14117562 14 94 3.5 5.0 4.2 2.7 132 chr3R 14117430 intron Kif19A - chr3R 14117496 intron Kif19A - chr3R 14117562 intron Kif19A - chr3R_14_14115001 chr3R_14115001 RAL-907 1871 chr3R 14169709 14169770 chr3R 14169821 14169873 11 103 7.0 7.0 7.0 1.4 164 chr3R 14169709 3` UTR Dop1R1 - chr3R 14169791 3` UTR Dop1R1 - chr3R 14169873 3` UTR Dop1R1 - chr3R_11_14165001 chr3R_14165001 RAL-907 1872 chr3R 14180793 14180828 chr3R 14185578 14185612 F-element 15 4781 7.5 2.5 5.0 2.5 4819 chr3R 14180793 intron Dop1R1 - chr3R 14183202 intron Dop1R1 - chr3R 14185612 intron Dop1R1 - chr3R_15_14180001 chr3R_14180001 RAL-907 1873 chr3R 14194424 14194455 chr3R 14203593 14203599 roo 5 9164 4.5 3.5 4.0 1.0 9175 chr3R 14194424 intron Dop1R1 - chr3R 14199012 intron Dop1R1 - chr3R 14203599 intron Dop1R1 - chr3R_5_14195001 chr3R_14195001 RAL-907 1874 chr3R 14248711 14248729 chr3R 14248809 14248827 4 98 11.5 16.0 13.8 0.3 116 chr3R 14248711 intergenic not near genes chr3R 14248769 intergenic not near genes chr3R 14248827 intergenic not near genes chr3R_4_14245001 chr3R_14245001 RAL-907 1875 chr3R 14253683 14253720 chr3R 14253782 14253819 6 96 3.5 4.0 3.8 1.2 136 chr3R 14253683 intron Aats-met - chr3R 14253751 intron Aats-met - chr3R 14253819 intron Aats-met - chr3R_6_14250001 chr3R_14250001 RAL-907 1876 chr3R 14256758 14256765 chr3R 14256864 14256871 4 106 7.0 10.0 8.5 0.4 113 chr3R 14256758 intron,3` UTR Aats-met -,CG43179 + chr3R 14256814 intron,3` UTR Aats-met -,CG43179 + chr3R 14256871 intron,3` UTR Aats-met -,CG43179 + chr3R_4_14255001 chr3R_14255001 RAL-907 1877 chr3R 14257326 14257348 chr3R 14257439 14257462 6 112 6.5 6.0 6.2 0.8 136 chr3R 14257326 intron Aats-met - chr3R 14257394 intron Aats-met - chr3R 14257462 intron Aats-met - chr3R_6_14255001 chr3R_14255001 RAL-907 1878 chr3R 14257349 14257351 chr3R 14257437 14257470 4 105 6.5 6.0 6.2 0.6 121 chr3R 14257349 intron Aats-met - chr3R 14257410 intron Aats-met - chr3R 14257470 intron Aats-met - chr3R_4_14255001 chr3R_14255001 RAL-907 1879 chr3R 14281067 14281117 chr3R 14281164 14281173 13 85 14.5 13.5 14.0 0.9 106 chr3R 14281067 intron trx - chr3R 14281120 intron trx - chr3R 14281173 intron trx - chr3R_13_14280001 chr3R_14280001 RAL-907 1880 chr3R 14313608 14313653 chr3R 14313724 14313741 4 109 8.5 11.5 10.0 0.4 133 chr3R 14313608 intron CG31321 + chr3R 14313674 intron CG31321 + chr3R 14313741 intron CG31321 + chr3R_4_14310001 chr3R_14310001 RAL-907 1881 chr3R 14426030 14426071 chr3R 14426154 14426195 7 124 15.5 9.5 12.5 0.5 165 chr3R 14426030 intron cv-c - chr3R 14426112 intron cv-c - chr3R 14426195 intron cv-c - chr3R_7_14425001 chr3R_14425001 RAL-907 1882 chr3R 14440720 14440752 chr3R 14440816 14440848 6 95 15.5 12.0 13.8 0.4 128 chr3R 14440720 intron cv-c - chr3R 14440784 intron cv-c - chr3R 14440848 intron cv-c - chr3R_6_14440001 chr3R_14440001 RAL-907 1883 chr3R 14466961 14467014 chr3R 14467063 14467076 5 94 8.5 9.5 9.0 0.5 115 chr3R 14466961 intron cv-c - chr3R 14467018 intron cv-c - chr3R 14467076 intron cv-c - chr3R_5_14465001 chr3R_14465001 RAL-907 1884 chr3R 14527398 14527405 chr3R 14527490 14527497 5 92 6.0 3.5 4.8 0.9 99 chr3R 14527398 intron Pde6 - chr3R 14527448 intron Pde6 - chr3R 14527497 intron Pde6 - chr3R_5_14525001 chr3R_14525001 RAL-907 1885 chr3R 14608450 14608477 chr3R 14608562 14608589 12 112 1.0 4.0 2.5 3.4 139 chr3R 14608450 intergenic stumps + chr3R 14608520 intergenic stumps + chr3R 14608589 intergenic not near genes chr3R_12_14605001 chr3R_14605001 RAL-907 1886 chr3R 14616269 14616307 chr3R 14616365 14616403 7 96 9.0 10.0 9.5 0.7 134 chr3R 14616269 intron CG14853 + chr3R 14616336 intron CG14853 + chr3R 14616403 intron CG14853 + chr3R_7_14615001 chr3R_14615001 RAL-907 1887 chr3R 14677668 14677698 chr3R 14677769 14677798 5 100 9.5 8.0 8.8 0.5 130 chr3R 14677668 intron Meltrin - chr3R 14677733 intron Meltrin - chr3R 14677798 intron Meltrin - chr3R_5_14675001 chr3R_14675001 RAL-907 1888 chr3R 14688108 14688151 chr3R 14688209 14688252 4 101 17.0 18.0 17.5 0.2 144 chr3R 14688108 intron Meltrin - chr3R 14688180 intron Meltrin - chr3R 14688252 intron Meltrin - chr3R_4_14685001 chr3R_14685001 RAL-907 1889 chr3R 14704389 14704409 chr3R 14704486 14704506 5 95 9.0 10.0 9.5 0.5 117 chr3R 14704389 intron kibra - chr3R 14704448 intron kibra - chr3R 14704506 intron kibra - chr3R_5_14700001 chr3R_14700001 RAL-907 1890 chr3R 14764550 14764588 chr3R 14764668 14764706 6 116 5.0 1.5 3.2 1.4 156 chr3R 14764550 intron jvl + chr3R 14764628 intron jvl + chr3R 14764706 intron jvl + chr3R_6_14760001 chr3R_14760001 RAL-907 1891 chr3R 14840936 14840966 chr3R 14841031 14841051 7 97 7.5 7.0 7.2 0.9 115 chr3R 14840936 intron btsz - chr3R 14840994 intron btsz - chr3R 14841051 intron btsz - chr3R_7_14840001 chr3R_14840001 RAL-907 1892 chr3R 14898456 14898496 chr3R 14898596 14898636 8 140 6.0 1.5 3.8 1.7 180 chr3R 14898456 intergenic Nup93-2 -,CG3817 + chr3R 14898546 intergenic Nup93-2 -,CG3817 + chr3R 14898636 intergenic CG3817 +,Nup93-2 - chr3R_8_14895001 chr3R_14895001 RAL-907 1893 chr3R 14971320 14971359 chr3R 14971442 14971468 4 111 5.5 5.0 5.2 0.6 148 chr3R 14971320 intergenic not near genes chr3R 14971394 intergenic not near genes chr3R 14971468 intergenic not near genes chr3R_4_14970001 chr3R_14970001 RAL-907 1894 chr3R 15006841 15006886 chr3R 15007240 15007285 4 399 9.0 13.5 11.2 0.3 444 chr3R 15006841 intergenic not near genes chr3R 15007063 intergenic not near genes chr3R 15007285 intergenic not near genes chr3R_4_15005001 chr3R_15005001 RAL-907 1895 chr3R 15009127 15009177 chr3R 15009242 15009281 4 104 5.5 6.0 5.8 0.6 154 chr3R 15009127 intergenic not near genes chr3R 15009204 intergenic not near genes chr3R 15009281 intergenic not near genes chr3R_4_15005001 chr3R_15005001 RAL-907 1896 chr3R 15036990 15037027 chr3R 15037085 15037130 6 97 14.0 17.0 15.5 0.4 140 chr3R 15036990 intergenic RpL10Aa + chr3R 15037060 intergenic RpL10Aa + chr3R 15037130 intergenic RpL10Aa + chr3R_6_15035001 chr3R_15035001 RAL-907 1897 chr3R 15041399 15041408 chr3R 15045203 15045212 Doc 4 3804 5.5 1.0 3.2 1.0 3813 chr3R 15041399 intergenic not near genes chr3R 15043306 intergenic not near genes chr3R 15045212 intergenic not near genes chr3R_4_15040001 chr3R_15040001 RAL-907 1898 chr3R 15041409 15041451 chr3R 15045197 15045239 Doc 11 3793 2.5 1.0 1.8 3.9 3830 chr3R 15041409 intergenic not near genes chr3R 15043324 intergenic not near genes chr3R 15045239 intergenic not near genes chr3R_11_15040001 chr3R_15040001 RAL-907 1899 chr3R 15059268 15059274 chr3R 15059499 15059505 BS 4 231 2.0 0.0 1.0 2.0 237 chr3R 15059268 intron dpr9 - chr3R 15059386 intron dpr9 - chr3R 15059505 intron dpr9 - chr3R_4_15055001 chr3R_15055001 RAL-907 1900 chr3R 15071166 15071219 chr3R 15071311 15071364 8 144 8.5 5.0 6.8 1.0 198 chr3R 15071166 intron dpr9 - chr3R 15071265 intron dpr9 - chr3R 15071364 intron dpr9 - chr3R_8_15070001 chr3R_15070001 RAL-907 1901 chr3R 15079789 15079828 chr3R 15080050 15080077 pogo 7 258 4.5 0.0 2.2 2.2 288 chr3R 15079789 3` UTR CG6966 - chr3R 15079933 3` UTR CG6966 - chr3R 15080077 3` UTR CG6966 - chr3R_7_15075001 chr3R_15075001 RAL-907 1902 chr3R 15084132 15084145 chr3R 15084284 15084297 4 152 9.5 7.5 8.5 0.4 165 chr3R 15084132 intron CG6966 - chr3R 15084214 intron CG6966 - chr3R 15084297 intron CG6966 - chr3R_4_15080001 chr3R_15080001 RAL-907 1903 chr3R 15088052 15088089 chr3R 15088170 15088198 5 116 8.5 0.0 4.2 1.0 146 chr3R 15088052 intron CG6966 - chr3R 15088125 intron CG6966 - chr3R 15088198 intron CG6966 - chr3R_5_15085001 chr3R_15085001 RAL-907 1904 chr3R 15102481 15102527 chr3R 15109756 15109802 412 10 7274 6.0 5.0 5.5 1.5 7321 chr3R 15102481 intron CG42788 - chr3R 15106142 intron CG42788 - chr3R 15109802 intron CG42788 - chr3R_10_15105001 chr3R_15105001 RAL-907 1905 chr3R 15127763 15127793 chr3R 15127863 15127893 5 100 12.0 11.5 11.8 0.4 130 chr3R 15127763 intron CG42788 - chr3R 15127828 intron CG42788 - chr3R 15127893 intron CG42788 - chr3R_5_15125001 chr3R_15125001 RAL-907 1906 chr3R 15156200 15156243 chr3R 15156367 15156410 11 167 8.0 7.5 7.8 1.2 210 chr3R 15156200 intron Gyc88E + chr3R 15156305 intron Gyc88E + chr3R 15156410 intron Gyc88E + chr3R_11_15155001 chr3R_15155001 RAL-907 1907 chr3R 15160555 15160578 chr3R 15160673 15160696 7 118 9.5 8.5 9.0 0.7 141 chr3R 15160555 intron Gyc88E + chr3R 15160626 intron Gyc88E + chr3R 15160696 intron Gyc88E + chr3R_7_15160001 chr3R_15160001 RAL-907 1908 chr3R 15167792 15167837 chr3R 15167969 15168008 5 174 5.5 9.5 7.5 0.6 216 chr3R 15167792 intron Gyc88E + chr3R 15167900 intron Gyc88E + chr3R 15168008 intron Gyc88E + chr3R_5_15165001 chr3R_15165001 RAL-907 1909 chr3R 15180884 15180919 chr3R 15180990 15181006 7 101 12.0 5.0 8.5 0.7 122 chr3R 15180884 intron Gyc88E + chr3R 15180945 intron Gyc88E + chr3R 15181006 intron Gyc88E + chr3R_7_15180001 chr3R_15180001 RAL-907 1910 chr3R 15184535 15184568 chr3R 15184616 15184662 5 93 4.5 4.5 4.5 0.9 127 chr3R 15184535 intron Gyc88E + chr3R 15184598 intron Gyc88E + chr3R 15184662 intron Gyc88E + chr3R_5_15180001 chr3R_15180001 RAL-907 1911 chr3R 15318100 15318135 chr3R 15318198 15318200 4 93 16.0 15.0 15.5 0.2 100 chr3R 15318100 exon CG14866 + chr3R 15318150 3` UTR CG14866 + chr3R 15318200 3` UTR CG14866 + chr3R_4_15315001 chr3R_15315001 RAL-907 1912 chr3R 15439552 15439562 chr3R 15439712 15439722 4 160 10.5 1.5 6.0 0.6 170 chr3R 15439552 intergenic Act88F + chr3R 15439637 intergenic Act88F + chr3R 15439722 intergenic Act88F + chr3R_4_15435001 chr3R_15435001 RAL-907 1913 chr3R 15476796 15476845 chr3R 15476892 15476942 4 97 16.0 12.0 14.0 0.3 146 chr3R 15476796 intergenic not near genes chr3R 15476869 intergenic not near genes chr3R 15476942 intergenic not near genes chr3R_4_15475001 chr3R_15475001 RAL-907 1914 chr3R 15592874 15592919 chr3R 15592978 15593023 10 104 3.5 3.5 3.5 2.2 149 chr3R 15592874 intergenic not near genes chr3R 15592948 intergenic not near genes chr3R 15593023 intergenic not near genes chr3R_10_15590001 chr3R_15590001 RAL-907 1915 chr3R 15594656 15594672 chr3R 15594759 15594775 6 103 7.5 8.5 8.0 0.7 119 chr3R 15594656 intergenic not near genes chr3R 15594716 intergenic not near genes chr3R 15594775 intergenic not near genes chr3R_6_15590001 chr3R_15590001 RAL-907 1916 chr3R 15601159 15601171 chr3R 15608701 15608713 412 5 7542 9.5 6.0 7.8 0.6 7554 chr3R 15601159 intergenic not near genes chr3R 15604936 intergenic not near genes chr3R 15608713 intergenic not near genes chr3R_5_15600001 chr3R_15600001 RAL-907 1917 chr3R 15601178 15601196 chr3R 15608689 15608713 412 10 7535 6.0 5.5 5.8 1.5 7535 chr3R 15601178 intergenic not near genes chr3R 15604946 intergenic not near genes chr3R 15608713 intergenic not near genes chr3R_10_15600001 chr3R_15600001 RAL-907 1918 chr3R 15618715 15618762 chr3R 15626209 15626256 blood 5 7494 2.5 4.5 3.5 1.1 7541 chr3R 15618715 intergenic not near genes chr3R 15622486 intergenic not near genes chr3R 15626256 intergenic not near genes chr3R_5_15620001 chr3R_15620001 RAL-907 1919 chr3R 15691172 15691331 chr3R 15691292 15691438 7 112 2.5 3.0 2.8 1.8 266 chr3R 15691172 intergenic not near genes chr3R 15691305 intergenic not near genes chr3R 15691438 intergenic not near genes chr3R_7_15690001 chr3R_15690001 RAL-907 1920 chr3R 15718425 15718450 chr3R 15724775 15724800 5 6350 18.5 15.5 17.0 0.3 6375 chr3R 15718425 intergenic not near genes chr3R 15721612 intergenic not near genes chr3R 15724800 intergenic not near genes chr3R_5_15720001 chr3R_15720001 RAL-907 1921 chr3R 15718266 15718288 chr3R 15724901 15724923 6 6635 18.5 23.0 20.8 0.3 6657 chr3R 15718266 intergenic not near genes chr3R 15721594 intergenic not near genes chr3R 15724923 intergenic not near genes chr3R_6_15720001 chr3R_15720001 RAL-907 1922 chr3R 15735225 15735234 chr3R 15739965 15739969 F-element 6 4739 5.0 7.5 6.2 0.8 4744 chr3R 15735225 intergenic not near genes chr3R 15737597 intergenic not near genes chr3R 15739969 intergenic not near genes chr3R_6_15735001 chr3R_15735001 RAL-907 1923 chr3R 15885721 15885762 chr3R 15885967 15886000 13 244 10.5 12.5 11.5 1.0 279 chr3R 15885721 intergenic not near genes chr3R 15885860 intergenic not near genes chr3R 15886000 intergenic not near genes chr3R_13_15885001 chr3R_15885001 RAL-907 1924 chr3R 15891651 15891687 chr3R 15892056 15892077 4 393 10.0 10.0 10.0 0.4 426 chr3R 15891651 intron CG14877 - chr3R 15891864 intron CG14877 - chr3R 15892077 intron CG14877 - chr3R_4_15890001 chr3R_15890001 RAL-907 1925 chr3R 15892637 15892681 chr3R 15892733 15892782 10 100 2.5 2.0 2.2 3.1 145 chr3R 15892637 intron CG14877 - chr3R 15892710 intron CG14877 - chr3R 15892782 intron CG14877 - chr3R_10_15890001 chr3R_15890001 RAL-907 1926 chr3R 16033399 16033430 chr3R 16033500 16033531 5 101 19.0 16.5 17.8 0.3 132 chr3R 16033399 intron pnr + chr3R 16033465 intron pnr + chr3R 16033531 intron pnr + chr3R_5_16030001 chr3R_16030001 RAL-907 1927 chr3R 16048835 16048881 chr3R 16048940 16048965 5 94 4.5 2.0 3.2 1.2 130 chr3R 16048835 intron ird5 - chr3R 16048900 intron ird5 - chr3R 16048965 intron ird5 - chr3R_5_16045001 chr3R_16045001 RAL-907 1928 chr3R 16073422 16073472 chr3R 16073541 16073596 12 124 5.5 6.0 5.8 1.8 174 chr3R 16073422 intron Mhcl - chr3R 16073509 intron Mhcl - chr3R 16073596 intron Mhcl - chr3R_12_16070001 chr3R_16070001 RAL-907 1929 chr3R 16167810 16167833 chr3R 16167925 16167948 7 115 7.0 9.0 8.0 0.8 138 chr3R 16167810 intron CG6006 + chr3R 16167879 intron CG6006 + chr3R 16167948 exon CG6006 + chr3R_7_16165001 chr3R_16165001 RAL-907 1930 chr3R 16189391 16189439 chr3R 16189814 16189862 invader4 13 422 12.5 7.5 10.0 1.2 471 chr3R 16189391 intron sra + chr3R 16189626 intron sra + chr3R 16189862 intron sra + chr3R_13_16185001 chr3R_16185001 RAL-907 1931 chr3R 16225068 16225118 chr3R 16225173 16225223 17 105 7.0 6.5 6.8 2.2 155 chr3R 16225068 intergenic not near genes chr3R 16225146 intergenic not near genes chr3R 16225223 intergenic tara + chr3R_17_16225001 chr3R_16225001 RAL-907 1932 chr3R 16246540 16246554 chr3R 16246636 16246650 4 95 10.5 14.5 12.5 0.3 110 chr3R 16246540 intron tara + chr3R 16246595 intron tara + chr3R 16246650 intron tara + chr3R_4_16245001 chr3R_16245001 RAL-907 1933 chr3R 16374282 16374324 chr3R 16374419 16374426 11 132 4.5 3.5 4.0 2.2 144 chr3R 16374282 intergenic ss - chr3R 16374354 intergenic ss - chr3R 16374426 intergenic ss - chr3R_11_16370001 chr3R_16370001 RAL-907 1934 chr3R 16620367 16620393 chr3R 16620526 16620553 4 158 5.0 3.0 4.0 0.8 186 chr3R 16620367 intergenic CG14893 +,CG17560 + chr3R 16620460 intergenic CG14893 + chr3R 16620553 intergenic CG14893 + chr3R_4_16620001 chr3R_16620001 RAL-907 1935 chr3R 16633680 16633681 chr3R 16633781 16633801 4 114 7.5 10.0 8.8 0.4 121 chr3R 16633680 intron Fas1 + chr3R 16633740 intron Fas1 + chr3R 16633801 intron Fas1 + chr3R_4_16630001 chr3R_16630001 RAL-907 1936 chr3R 16790116 16790146 chr3R 16790273 16790302 4 156 13.5 7.5 10.5 0.3 186 chr3R 16790116 intergenic Glut3 + chr3R 16790209 intergenic Glut3 + chr3R 16790302 intergenic Glut3 + chr3R_4_16790001 chr3R_16790001 RAL-907 1937 chr3R 16802103 16802136 chr3R 16802204 16802237 8 98 12.0 5.0 8.5 0.8 134 chr3R 16802103 intergenic CR45751 + chr3R 16802170 intergenic CR45751 + chr3R 16802237 intergenic CR45751 + chr3R_8_16800001 chr3R_16800001 RAL-907 1938 chr3R 16816301 16816350 chr3R 16816493 16816511 5 174 3.0 2.0 2.5 1.4 210 chr3R 16816301 intron abd-A - chr3R 16816406 intron abd-A - chr3R 16816511 intron abd-A - chr3R_5_16815001 chr3R_16815001 RAL-907 1939 chr3R 16820232 16820272 chr3R 16820346 16820386 10 114 9.5 7.5 8.5 1.1 154 chr3R 16820232 intron abd-A - chr3R 16820309 intron abd-A - chr3R 16820386 intron abd-A - chr3R_10_16820001 chr3R_16820001 RAL-907 1940 chr3R 16860318 16860356 chr3R 16860416 16860423 7 94 3.0 3.5 3.2 1.7 105 chr3R 16860318 intron iab-8 - chr3R 16860370 intron iab-8 - chr3R 16860423 intron iab-8 - chr3R_7_16860001 chr3R_16860001 RAL-907 1941 chr3R 16921819 16921847 chr3R 16921921 16921951 4 104 9.5 7.5 8.5 0.4 132 chr3R 16921819 intron iab-8 - chr3R 16921885 intron iab-8 - chr3R 16921951 intron iab-8 - chr3R_4_16920001 chr3R_16920001 RAL-907 1942 chr3R 17015021 17015061 chr3R 17015158 17015194 11 136 6.5 6.0 6.2 1.5 173 chr3R 17015021 intron Pxd + chr3R 17015108 intron Pxd + chr3R 17015194 intron Pxd + chr3R_11_17015001 chr3R_17015001 RAL-907 1943 chr3R 17027595 17027645 chr3R 17030925 17030975 9 3332 26.5 31.0 28.8 0.3 3380 chr3R 17027595 intron Pxd + chr3R 17029285 exon CG5225 + chr3R 17030975 intergenic CG5225 + chr3R_9_17025001 chr3R_17025001 RAL-907 1944 chr3R 17060830 17060851 chr3R 17060912 17060931 4 84 14.5 12.5 13.5 0.3 101 chr3R 17060830 intron Dad + chr3R 17060880 intron Dad + chr3R 17060931 intron Dad + chr3R_4_17060001 chr3R_17060001 RAL-907 1945 chr3R 17194395 17194425 chr3R 17194489 17194496 5 91 3.0 5.0 4.0 1.0 101 chr3R 17194395 intron Mur89F - chr3R 17194446 intron Mur89F - chr3R 17194496 intron Mur89F - chr3R_5_17190001 chr3R_17190001 RAL-907 1946 chr3R 17294647 17294698 chr3R 17295095 17295151 BS 4 448 4.0 0.0 2.0 1.3 504 chr3R 17294647 intergenic not near genes chr3R 17294899 intergenic not near genes chr3R 17295151 intergenic not near genes chr3R_4_17290001 chr3R_17290001 RAL-907 1947 chr3R 17346673 17346717 chr3R 17348256 17348292 F-element 15 1580 6.5 4.5 5.5 2.3 1619 chr3R 17346673 intron beat-IIa - chr3R 17347482 intron beat-IIa - chr3R 17348292 intron beat-IIa - chr3R_15_17345001 chr3R_17345001 RAL-907 1948 chr3R 17353428 17353481 chr3R 17353525 17353578 10 91 7.0 5.0 6.0 1.4 150 chr3R 17353428 intron beat-IIa - chr3R 17353503 intron beat-IIa - chr3R 17353578 intron beat-IIa - chr3R_10_17350001 chr3R_17350001 RAL-907 1949 chr3R 17461192 17461228 chr3R 17461294 17461330 8 102 4.0 3.0 3.5 1.8 138 chr3R 17461192 intergenic not near genes chr3R 17461261 intergenic not near genes chr3R 17461330 intergenic not near genes chr3R_8_17460001 chr3R_17460001 RAL-907 1950 chr3R 17497941 17497958 chr3R 17498047 17498064 4 106 4.0 2.5 3.2 1.0 123 chr3R 17497941 intron Dscam3 - chr3R 17498002 intron Dscam3 - chr3R 17498064 intron Dscam3 - chr3R_4_17495001 chr3R_17495001 RAL-907 1951 chr3R 17591273 17591301 chr3R 17591721 17591725 F-element 5 435 3.5 4.5 4.0 1.0 452 chr3R 17591273 intergenic not near genes chr3R 17591499 intergenic not near genes chr3R 17591725 intergenic not near genes chr3R_5_17590001 chr3R_17590001 RAL-907 1952 chr3R 17634365 17634402 chr3R 17634449 17634492 9 86 4.5 5.5 5.0 1.5 127 chr3R 17634365 intron CG43175 + chr3R 17634428 intron CG43175 + chr3R 17634492 intron CG43175 + chr3R_9_17630001 chr3R_17630001 RAL-907 1953 chr3R 17638303 17638347 chr3R 17638807 17638852 roo 13 505 1.0 5.5 3.2 3.1 549 chr3R 17638303 intron CG43175 + chr3R 17638578 intron CG43175 + chr3R 17638852 intron,intron CG43175 +,CR45222 + chr3R_13_17635001 chr3R_17635001 RAL-907 1954 chr3R 17645682 17645725 chr3R 17645832 17645875 6 149 7.0 5.5 6.2 0.8 193 chr3R 17645682 intergenic CG43175 + chr3R 17645778 intergenic not near genes chr3R 17645875 intergenic not near genes chr3R_6_17645001 chr3R_17645001 RAL-907 1955 chr3R 17728866 17728875 chr3R 17728971 17728988 4 111 1.0 5.5 3.2 1.0 122 chr3R 17728866 intron Lgr1 + chr3R 17728927 intron Lgr1 + chr3R 17728988 intron Lgr1 + chr3R_4_17725001 chr3R_17725001 RAL-907 1956 chr3R 17734823 17734854 chr3R 17734956 17734987 12 132 9.0 7.5 8.2 1.3 164 chr3R 17734823 intergenic CG14321 + chr3R 17734905 intergenic not near genes chr3R 17734987 intergenic not near genes chr3R_12_17730001 chr3R_17730001 RAL-907 1957 chr3R 17773387 17773393 chr3R 17773487 17773493 4 100 3.5 5.5 4.5 0.7 106 chr3R 17773387 intron CG43102 - chr3R 17773440 intron CG43102 - chr3R 17773493 exon CG43102 - chr3R_4_17770001 chr3R_17770001 RAL-907 1958 chr3R 17823184 17823229 chr3R 17823281 17823326 13 95 4.0 1.0 2.5 3.7 142 chr3R 17823184 intron tinc + chr3R 17823255 intron tinc + chr3R 17823326 intron tinc + chr3R_13_17820001 chr3R_17820001 RAL-907 1959 chr3R 17845103 17845218 chr3R 17845208 17845273 6 81 2.0 2.0 2.0 2.0 170 chr3R 17845103 intron tinc + chr3R 17845188 intron tinc + chr3R 17845273 intron tinc + chr3R_6_17845001 chr3R_17845001 RAL-907 1960 chr3R 17861331 17861369 chr3R 17861417 17861465 4 93 11.5 10.0 10.8 0.3 134 chr3R 17861331 intron tinc + chr3R 17861398 intron tinc + chr3R 17861465 intron tinc + chr3R_4_17860001 chr3R_17860001 RAL-907 1961 chr3R 17925839 17925882 chr3R 17927325 17927368 hobo 8 1483 2.0 3.0 2.5 2.3 1529 chr3R 17925839 intron cpo + chr3R 17926604 intron cpo + chr3R 17927368 intron cpo + chr3R_8_17925001 chr3R_17925001 RAL-907 1962 chr3R 17948071 17948092 chr3R 17948223 17948244 5 152 10.5 8.5 9.5 0.5 173 chr3R 17948071 intron cpo + chr3R 17948158 intron cpo + chr3R 17948244 intron cpo + chr3R_5_17945001 chr3R_17945001 RAL-907 1963 chr3R 17983195 17983246 chr3R 17983291 17983328 5 87 3.5 3.0 3.2 1.2 133 chr3R 17983195 intron cpo + chr3R 17983262 intron cpo + chr3R 17983328 intron cpo + chr3R_5_17980001 chr3R_17980001 RAL-907 1964 chr3R 18012971 18013000 chr3R 18013067 18013096 7 93 5.0 5.0 5.0 1.2 125 chr3R 18012971 intron cpo + chr3R 18013034 intron cpo + chr3R 18013096 intron cpo + chr3R_7_18010001 chr3R_18010001 RAL-907 1965 chr3R 18025342 18025359 chr3R 18025443 18025460 6 101 2.5 6.5 4.5 1.1 118 chr3R 18025342 3` UTR CG7794 + chr3R 18025401 intergenic CG7794 + chr3R 18025460 intergenic CG7794 + chr3R_6_18025001 chr3R_18025001 RAL-907 1966 chr3R 18032764 18032809 chr3R 18040452 18040502 opus 7 7689 3.5 0.0 1.8 2.5 7738 chr3R 18032764 intergenic not near genes chr3R 18036633 intergenic not near genes chr3R 18040502 intergenic not near genes chr3R_7_18035001 chr3R_18035001 RAL-907 1967 chr3R 18061427 18061460 chr3R 18061538 18061572 7 112 2.0 0.0 1.0 3.5 145 chr3R 18061427 intergenic not near genes chr3R 18061500 intergenic not near genes chr3R 18061572 intergenic not near genes chr3R_7_18060001 chr3R_18060001 RAL-907 1968 chr3R 18061555 18061570 chr3R 18063149 18063152 F-element 4 1591 0.0 0.0 0.0 4.0 1597 chr3R 18061555 intergenic not near genes chr3R 18062354 intergenic not near genes chr3R 18063152 intergenic not near genes chr3R_4_18060001 chr3R_18060001 RAL-907 1969 chr3R 18078135 18078164 chr3R 18078234 18078257 7 96 7.0 0.0 3.5 1.6 122 chr3R 18078135 intergenic not near genes chr3R 18078196 intergenic not near genes chr3R 18078257 intergenic not near genes chr3R_7_18075001 chr3R_18075001 RAL-907 1970 chr3R 18122885 18122912 chr3R 18122982 18123009 4 97 7.0 10.5 8.8 0.4 124 chr3R 18122885 intron sr + chr3R 18122947 intron sr + chr3R 18123009 intron sr + chr3R_4_18120001 chr3R_18120001 RAL-907 1971 chr3R 18143575 18143587 chr3R 18143684 18143696 6 108 5.0 8.5 6.8 0.8 121 chr3R 18143575 intergenic not near genes chr3R 18143636 intergenic not near genes chr3R 18143696 intergenic not near genes chr3R_6_18140001 chr3R_18140001 RAL-907 1972 chr3R 18237544 18237595 chr3R 18237655 18237706 8 105 18.5 22.0 20.2 0.4 162 chr3R 18237544 intron repo + chr3R 18237625 intron repo + chr3R 18237706 intron repo + chr3R_8_18235001 chr3R_18235001 RAL-907 1973 chr3R 18352555 18352608 chr3R 18352668 18352720 15 111 8.0 6.0 7.0 1.9 165 chr3R 18352555 intron CG15803 - chr3R 18352638 intron CG15803 - chr3R 18352720 intron CG15803 - chr3R_15_18350001 chr3R_18350001 RAL-907 1974 chr3R 18379618 18379625 chr3R 18379944 18379951 4 326 9.5 5.5 7.5 0.5 333 chr3R 18379618 intron CG7675 - chr3R 18379784 intron CG7675 - chr3R 18379951 intron CG7675 - chr3R_4_18375001 chr3R_18375001 RAL-907 1975 chr3R 18379628 18379659 chr3R 18379936 18379985 12 322 6.5 5.5 6.0 1.7 357 chr3R 18379628 intron CG7675 - chr3R 18379806 intron CG7675 - chr3R 18379985 intron CG7675 - chr3R_12_18375001 chr3R_18375001 RAL-907 1976 chr3R 18394451 18394498 chr3R 18394548 18394577 6 94 8.0 8.5 8.2 0.7 126 chr3R 18394451 intron Vha100-2 - chr3R 18394514 intron Vha100-2 - chr3R 18394577 intron Vha100-2 - chr3R_6_18390001 chr3R_18390001 RAL-907 1977 chr3R 18472274 18472287 chr3R 18472395 18472408 4 121 6.0 6.0 6.0 0.6 134 chr3R 18472274 intron fru - chr3R 18472341 intron fru - chr3R 18472408 intron fru - chr3R_4_18470001 chr3R_18470001 RAL-907 1978 chr3R 18473230 18473248 chr3R 18473337 18473355 6 107 0.0 0.0 0.0 6.0 125 chr3R 18473230 intron fru - chr3R 18473292 intron fru - chr3R 18473355 intron fru - chr3R_6_18470001 chr3R_18470001 RAL-907 1979 chr3R 18489785 18489817 chr3R 18489889 18489921 5 104 15.0 17.5 16.2 0.3 136 chr3R 18489785 intron fru - chr3R 18489853 intron fru - chr3R 18489921 intron fru - chr3R_5_18485001 chr3R_18485001 RAL-907 1980 chr3R 18501587 18501625 chr3R 18501677 18501726 16 98 11.5 10.5 11.0 1.3 139 chr3R 18501587 intron fru - chr3R 18501656 intron fru - chr3R 18501726 intron fru - chr3R_16_18500001 chr3R_18500001 RAL-907 1981 chr3R 18528366 18528387 chr3R 18528472 18528493 7 105 3.5 9.0 6.2 1.0 127 chr3R 18528366 intron fru - chr3R 18528430 intron fru - chr3R 18528493 intron fru - chr3R_7_18525001 chr3R_18525001 RAL-907 1982 chr3R 18606494 18606529 chr3R 18610746 18610780 F-element 9 4252 6.0 7.5 6.8 1.2 4286 chr3R 18606494 intron,intron qin +,CG14304 - chr3R 18608637 intron,intron qin +,CG14304 - chr3R 18610780 intron,intron qin +,CG14304 - chr3R_9_18605001 chr3R_18605001 RAL-907 1983 chr3R 18617698 18617732 chr3R 18617798 18617832 9 100 9.5 10.0 9.8 0.8 134 chr3R 18617698 intron,intron qin +,CG14304 - chr3R 18617765 intron,intron qin +,CG14304 - chr3R 18617832 intron,intron qin +,CG14304 - chr3R_9_18615001 chr3R_18615001 RAL-907 1984 chr3R 18669847 18669887 chr3R 18669987 18670027 5 140 14.5 4.5 9.5 0.5 180 chr3R 18669847 intron CG7702 + chr3R 18669937 intron CG7702 + chr3R 18670027 intron CG7702 + chr3R_5_18665001 chr3R_18665001 RAL-907 1985 chr3R 18695744 18695773 chr3R 18695848 18695857 4 94 10.0 3.5 6.8 0.5 113 chr3R 18695744 3` UTR CG34282 + chr3R 18695800 intergenic CG34282 + chr3R 18695857 intergenic CG34282 + chr3R_4_18695001 chr3R_18695001 RAL-907 1986 chr3R 18766772 18766806 chr3R 18766859 18766893 9 94 4.5 1.5 3.0 2.2 121 chr3R 18766772 intron CG7720 - chr3R 18766832 intron CG7720 - chr3R 18766893 intron CG7720 - chr3R_9_18765001 chr3R_18765001 RAL-907 1987 chr3R 18785874 18785897 chr3R 18785957 18785994 4 93 7.0 9.5 8.2 0.4 120 chr3R 18785874 intron CG7720 - chr3R 18785934 intron CG7720 - chr3R 18785994 intron CG7720 - chr3R_4_18785001 chr3R_18785001 RAL-907 1988 chr3R 18792785 18792835 chr3R 18792888 18792937 7 102 1.5 0.0 0.8 3.9 152 chr3R 18792785 intron CG7720 - chr3R 18792861 intron CG7720 - chr3R 18792937 intron CG7720 - chr3R_7_18790001 chr3R_18790001 RAL-907 1989 chr3R 18807310 18807334 chr3R 18807406 18807431 7 97 0.5 0.0 0.2 5.8 121 chr3R 18807310 intron CG18208 - chr3R 18807370 intron CG18208 - chr3R 18807431 intron CG18208 - chr3R_7_18805001 chr3R_18805001 RAL-907 1990 chr3R 18812074 18812105 chr3R 18812162 18812178 12 93 2.5 4.5 3.5 2.7 104 chr3R 18812074 intron CG18208 - chr3R 18812126 intron CG18208 - chr3R 18812178 intron CG18208 - chr3R_12_18810001 chr3R_18810001 RAL-907 1991 chr3R 18830046 18830096 chr3R 18830204 18830254 10 155 8.5 9.0 8.8 1.0 208 chr3R 18830046 intron CG18208 - chr3R 18830150 intron CG18208 - chr3R 18830254 intron CG18208 - chr3R_10_18830001 chr3R_18830001 RAL-907 1992 chr3R 18862575 18862605 chr3R 18862680 18862710 5 105 1.5 7.0 4.2 1.0 135 chr3R 18862575 intergenic not near genes chr3R 18862642 intergenic not near genes chr3R 18862710 intergenic not near genes chr3R_5_18860001 chr3R_18860001 RAL-907 1993 chr3R 18877998 18878040 chr3R 18878140 18878186 5 146 3.5 4.5 4.0 1.0 188 chr3R 18877998 intergenic not near genes chr3R 18878092 intergenic not near genes chr3R 18878186 intergenic not near genes chr3R_5_18875001 chr3R_18875001 RAL-907 1994 chr3R 18887588 18887597 chr3R 18887688 18887698 5 101 4.0 2.5 3.2 1.2 110 chr3R 18887588 intergenic not near genes chr3R 18887643 intergenic not near genes chr3R 18887698 intergenic not near genes chr3R_5_18885001 chr3R_18885001 RAL-907 1995 chr3R 18891805 18891835 chr3R 18891893 18891932 7 96 3.0 5.0 4.0 1.4 127 chr3R 18891805 intergenic not near genes chr3R 18891868 intergenic not near genes chr3R 18891932 intergenic not near genes chr3R_7_18890001 chr3R_18890001 RAL-907 1996 chr3R 19014087 19014118 chr3R 19014187 19014218 4 100 4.5 4.5 4.5 0.7 131 chr3R 19014087 intron gukh + chr3R 19014152 intron gukh + chr3R 19014218 intron gukh + chr3R_4_19010001 chr3R_19010001 RAL-907 1997 chr3R 19117044 19117054 chr3R 19117208 19117212 4 162 7.0 0.0 3.5 0.9 168 chr3R 19117044 intron CG6040 + chr3R 19117128 intron CG6040 + chr3R 19117212 intron CG6040 + chr3R_4_19115001 chr3R_19115001 RAL-907 1998 chr3R 19159951 19159963 chr3R 19160050 19160060 8 99 6.0 6.0 6.0 1.1 109 chr3R 19159951 3` UTR nos + chr3R 19160006 3` UTR nos + chr3R 19160060 3` UTR nos + chr3R_8_19160001 chr3R_19160001 RAL-907 1999 chr3R 19198318 19198362 chr3R 19198460 19198504 6 142 8.5 9.0 8.8 0.6 186 chr3R 19198318 intron CG31475 + chr3R 19198411 intron CG31475 + chr3R 19198504 intron CG31475 + chr3R_6_19195001 chr3R_19195001 RAL-907 2000 chr3R 19207176 19207210 chr3R 19207429 19207431 4 243 16.5 10.0 13.2 0.3 255 chr3R 19207176 intergenic not near genes chr3R 19207304 intergenic not near genes chr3R 19207431 intergenic not near genes chr3R_4_19205001 chr3R_19205001 RAL-907 2001 chr3R 19220954 19221001 chr3R 19221091 19221138 6 137 3.5 6.5 5.0 1.0 184 chr3R 19220954 intron vib - chr3R 19221046 intron vib - chr3R 19221138 intron vib - chr3R_6_19220001 chr3R_19220001 RAL-907 2002 chr3R 19265500 19265658 chr3R 19265604 19265760 10 102 6.0 5.5 5.8 1.5 260 chr3R 19265500 intergenic not near genes chr3R 19265630 intergenic not near genes chr3R 19265760 intergenic not near genes chr3R_10_19265001 chr3R_19265001 RAL-907 2003 chr3R 19290907 19290913 chr3R 19291010 19291016 4 103 5.0 3.5 4.2 0.8 109 chr3R 19290907 intergenic not near genes chr3R 19290962 intergenic not near genes chr3R 19291016 intergenic not near genes chr3R_4_19290001 chr3R_19290001 RAL-907 2004 chr3R 19340375 19340423 chr3R 19340472 19340520 16 97 5.5 5.5 5.5 2.5 145 chr3R 19340375 intergenic not near genes chr3R 19340448 intergenic not near genes chr3R 19340520 intergenic not near genes chr3R_16_19340001 chr3R_19340001 RAL-907 2005 chr3R 19344647 19344697 chr3R 19344802 19344852 15 155 3.5 6.5 5.0 2.5 205 chr3R 19344647 intergenic not near genes chr3R 19344750 intergenic not near genes chr3R 19344852 intergenic not near genes chr3R_15_19340001 chr3R_19340001 RAL-907 2006 chr3R 19416736 19416744 chr3R 19416837 19416845 5 100 8.0 6.0 7.0 0.6 109 chr3R 19416736 intron CG31221 + chr3R 19416790 intron CG31221 + chr3R 19416845 intron CG31221 + chr3R_5_19415001 chr3R_19415001 RAL-907 2007 chr3R 19532201 19532237 chr3R 19532297 19532333 5 95 9.0 13.5 11.2 0.4 132 chr3R 19532201 intron Dys + chr3R 19532267 intron Dys + chr3R 19532333 intron Dys + chr3R_5_19530001 chr3R_19530001 RAL-907 2008 chr3R 19590633 19590683 chr3R 19590745 19590774 7 109 0.0 6.0 3.0 1.8 141 chr3R 19590633 exon Dys + chr3R 19590704 intron Dys + chr3R 19590774 exon Dys + chr3R_7_19590001 chr3R_19590001 RAL-907 2009 chr3R 19602739 19602793 chr3R 19602837 19602878 18 95 3.0 4.0 3.5 4.0 139 chr3R 19602739 intergenic CG7333 + chr3R 19602808 intergenic CG7333 + chr3R 19602878 intergenic CG7333 +,CG7342 + chr3R_18_19600001 chr3R_19600001 RAL-907 2010 chr3R 19716200 19716235 chr3R 19716291 19716332 5 96 14.5 15.5 15.0 0.3 132 chr3R 19716200 intergenic CG34286 - chr3R 19716266 intergenic CG34286 - chr3R 19716332 intergenic CG34286 - chr3R_5_19715001 chr3R_19715001 RAL-907 2011 chr3R 19783171 19783210 chr3R 19783279 19783315 12 107 15.0 11.5 13.2 0.8 144 chr3R 19783171 intergenic CG11407 +,CG11453 + chr3R 19783243 intergenic CG11407 +,CG11453 + chr3R 19783315 intergenic CG11407 +,CG11453 + chr3R_12_19780001 chr3R_19780001 RAL-907 2012 chr3R 19793898 19793922 chr3R 19794002 19794035 5 110 6.5 7.5 7.0 0.6 137 chr3R 19793898 intergenic bnl - chr3R 19793966 intergenic bnl - chr3R 19794035 intergenic bnl - chr3R_5_19790001 chr3R_19790001 RAL-907 2013 chr3R 19839513 19839554 chr3R 19839760 19839801 9 246 4.5 4.5 4.5 1.6 288 chr3R 19839513 intergenic not near genes chr3R 19839657 intergenic not near genes chr3R 19839801 intergenic not near genes chr3R_9_19835001 chr3R_19835001 RAL-907 2014 chr3R 19913990 19914041 chr3R 19914103 19914154 10 113 9.0 9.0 9.0 1.0 164 chr3R 19913990 3` UTR RhoGAP92B + chr3R 19914072 3` UTR RhoGAP92B + chr3R 19914154 3` UTR RhoGAP92B + chr3R_10_19910001 chr3R_19910001 RAL-907 2015 chr3R 19991331 19991364 chr3R 19991428 19991465 8 96 5.0 10.0 7.5 0.9 134 chr3R 19991331 intron Hs6st - chr3R 19991398 intron Hs6st - chr3R 19991465 intron Hs6st - chr3R_8_19990001 chr3R_19990001 RAL-907 2016 chr3R 20008805 20008847 chr3R 20008906 20008948 5 101 10.5 14.0 12.2 0.4 143 chr3R 20008805 intergenic MED25 +,Hs6st - chr3R 20008876 intergenic MED25 +,Hs6st - chr3R 20008948 5` UTR MED25 + chr3R_5_20005001 chr3R_20005001 RAL-907 2017 chr3R 20041114 20041129 chr3R 20041228 20041251 6 116 9.5 7.5 8.5 0.6 137 chr3R 20041114 intron CG17193 - chr3R 20041182 intron CG17193 - chr3R 20041251 intron CG17193 - chr3R_6_20040001 chr3R_20040001 RAL-907 2018 chr3R 20041130 20041145 chr3R 20041222 20041267 10 111 8.0 7.5 7.8 1.1 137 chr3R 20041130 intron CG17193 - chr3R 20041198 intron CG17193 - chr3R 20041267 intron CG17193 - chr3R_10_20040001 chr3R_20040001 RAL-907 2019 chr3R 20066099 20066119 chr3R 20066309 20066314 4 206 12.0 1.0 6.5 0.5 215 chr3R 20066099 intergenic not near genes chr3R 20066206 intergenic not near genes chr3R 20066314 intergenic not near genes chr3R_4_20065001 chr3R_20065001 RAL-907 2020 chr3R 20066540 20066583 chr3R 20066794 20066818 9 253 5.5 9.0 7.2 1.1 278 chr3R 20066540 intergenic not near genes chr3R 20066679 intergenic not near genes chr3R 20066818 intergenic not near genes chr3R_9_20065001 chr3R_20065001 RAL-907 2021 chr3R 20109520 20109566 chr3R 20114746 20114792 copia 8 5224 1.0 3.0 2.0 2.7 5272 chr3R 20109520 intergenic not near genes chr3R 20112156 intergenic not near genes chr3R 20114792 intergenic CG10887 + chr3R_8_20110001 chr3R_20110001 RAL-907 2022 chr3R 20132494 20132545 chr3R 20132940 20132989 16 441 1.5 8.0 4.8 2.8 495 chr3R 20132494 intergenic not near genes chr3R 20132742 intergenic not near genes chr3R 20132989 intergenic not near genes chr3R_16_20130001 chr3R_20130001 RAL-907 2023 chr3R 20156701 20156709 chr3R 20165880 20165899 roo 4 9187 4.0 4.5 4.2 0.8 9198 chr3R 20156701 intergenic not near genes chr3R 20161300 intergenic not near genes chr3R 20165899 intergenic not near genes chr3R_4_20160001 chr3R_20160001 RAL-907 2024 chr3R 20167791 20167812 chr3R 20167879 20167902 6 91 17.0 16.5 16.8 0.3 111 chr3R 20167791 intergenic not near genes chr3R 20167846 intergenic not near genes chr3R 20167902 intergenic not near genes chr3R_6_20165001 chr3R_20165001 RAL-907 2025 chr3R 20205544 20205596 chr3R 20205686 20205738 18 141 1.0 4.0 2.5 5.1 194 chr3R 20205544 intron Nlg4 + chr3R 20205641 intron Nlg4 + chr3R 20205738 intron Nlg4 + chr3R_18_20205001 chr3R_20205001 RAL-907 2026 chr3R 20209781 20209824 chr3R 20209887 20209930 7 106 8.5 7.5 8.0 0.8 149 chr3R 20209781 intron,5` UTR Nlg4 +,CG17199 - chr3R 20209856 intron Nlg4 + chr3R 20209930 intron Nlg4 + chr3R_7_20205001 chr3R_20205001 RAL-907 2027 chr3R 20245260 20245305 chr3R 20248890 20248935 F-element 5 3627 5.5 0.0 2.8 1.3 3675 chr3R 20245260 3` UTR Nlg4 + chr3R 20247098 intergenic not near genes chr3R 20248935 intergenic not near genes chr3R_5_20245001 chr3R_20245001 RAL-907 2028 chr3R 20266494 20266540 chr3R 20272985 20273031 Burdock 10 6491 2.0 4.0 3.0 2.5 6537 chr3R 20266494 intron cic + chr3R 20269762 intron cic + chr3R 20273031 intron cic + chr3R_10_20265001 chr3R_20265001 RAL-907 2029 chr3R 20282256 20282305 chr3R 20282352 20282401 11 96 6.5 9.5 8.0 1.2 145 chr3R 20282256 intron cic + chr3R 20282328 intron cic + chr3R 20282401 intron cic + chr3R_11_20280001 chr3R_20280001 RAL-907 2030 chr3R 20286133 20286173 chr3R 20286258 20286292 10 124 7.0 4.5 5.8 1.5 159 chr3R 20286133 intron cic + chr3R 20286212 intron cic + chr3R 20286292 intron cic + chr3R_10_20285001 chr3R_20285001 RAL-907 2031 chr3R 20308179 20308210 chr3R 20308281 20308329 5 111 3.5 2.0 2.8 1.3 150 chr3R 20308179 intergenic not near genes chr3R 20308254 intergenic not near genes chr3R 20308329 intergenic not near genes chr3R_5_20305001 chr3R_20305001 RAL-907 2032 chr3R 20312842 20312880 chr3R 20312947 20312986 8 106 9.5 5.5 7.5 0.9 144 chr3R 20312842 intron CG42668 + chr3R 20312914 intron CG42668 + chr3R 20312986 intron CG42668 + chr3R_8_20310001 chr3R_20310001 RAL-907 2033 chr3R 20330996 20331032 chr3R 20331502 20331534 roo 10 506 2.5 10.5 6.5 1.3 538 chr3R 20330996 intergenic Sirt2 + chr3R 20331265 intergenic Sirt2 + chr3R 20331534 intergenic not near genes chr3R_10_20330001 chr3R_20330001 RAL-907 2034 chr3R 20365147 20365159 chr3R 20365246 20365258 4 99 11.0 14.5 12.8 0.3 111 chr3R 20365147 intergenic not near genes chr3R 20365202 intergenic not near genes chr3R 20365258 intergenic not near genes chr3R_4_20365001 chr3R_20365001 RAL-907 2035 chr3R 20469451 20469469 chr3R 20469542 20469572 6 98 13.0 14.5 13.8 0.4 121 chr3R 20469451 intron Gfrl - chr3R 20469512 intron Gfrl - chr3R 20469572 intron Gfrl - chr3R_6_20465001 chr3R_20465001 RAL-907 2036 chr3R 20506572 20506616 chr3R 20507395 20507409 BS 5 817 8.0 8.5 8.2 0.5 837 chr3R 20506572 intergenic Or92a + chr3R 20506990 intergenic CG4288 - chr3R 20507409 3` UTR CG4288 - chr3R_5_20505001 chr3R_20505001 RAL-907 2037 chr3R 20512983 20513035 chr3R 20515707 20515758 opus 14 2727 0.0 0.0 0.0 14.0 2775 chr3R 20512983 intergenic not near genes chr3R 20514370 intergenic not near genes chr3R 20515758 intergenic not near genes chr3R_14_20510001 chr3R_20510001 RAL-907 2038 chr3R 20594464 20594507 chr3R 20594574 20594616 10 110 3.0 0.0 1.5 4.0 152 chr3R 20594464 intron bon + chr3R 20594540 intron bon + chr3R 20594616 intron bon + chr3R_10_20590001 chr3R_20590001 RAL-907 2039 chr3R 20596171 20596214 chr3R 20596278 20596296 15 104 4.5 4.5 4.5 2.7 125 chr3R 20596171 intron bon + chr3R 20596234 intron bon + chr3R 20596296 intron bon + chr3R_15_20595001 chr3R_20595001 RAL-907 2040 chr3R 20601849 20601855 chr3R 20601952 20601958 5 103 9.0 9.0 9.0 0.5 109 chr3R 20601849 intron bon + chr3R 20601904 intron bon + chr3R 20601958 intron bon + chr3R_5_20600001 chr3R_20600001 RAL-907 2041 chr3R 20617506 20617512 chr3R 20617795 20617801 5 289 6.0 5.0 5.5 0.8 295 chr3R 20617506 intergenic CG5466 + chr3R 20617654 intergenic CG5466 + chr3R 20617801 intergenic CG5466 + chr3R_5_20615001 chr3R_20615001 RAL-907 2042 chr3R 20657318 20657341 chr3R 20657483 20657506 5 164 22.0 15.0 18.5 0.3 188 chr3R 20657318 intron Nep4 - chr3R 20657412 intron Nep4 - chr3R 20657506 intron Nep4 - chr3R_5_20655001 chr3R_20655001 RAL-907 2043 chr3R 20684200 20684243 chr3R 20684304 20684347 10 104 5.5 8.0 6.8 1.3 147 chr3R 20684200 intergenic not near genes chr3R 20684274 intergenic not near genes chr3R 20684347 intergenic not near genes chr3R_10_20680001 chr3R_20680001 RAL-907 2044 chr3R 20686630 20686656 chr3R 20686727 20686753 5 97 12.5 17.5 15.0 0.3 123 chr3R 20686630 intergenic not near genes chr3R 20686692 intergenic not near genes chr3R 20686753 intergenic not near genes chr3R_5_20685001 chr3R_20685001 RAL-907 2045 chr3R 20707725 20707773 chr3R 20707960 20708008 6 234 0.5 7.0 3.8 1.2 283 chr3R 20707725 intron Oamb - chr3R 20707866 intron Oamb - chr3R 20708008 intron Oamb - chr3R_6_20705001 chr3R_20705001 RAL-907 2046 chr3R 20708728 20708784 chr3R 20708833 20708889 8 105 15.0 14.5 14.8 0.5 161 chr3R 20708728 intron Oamb - chr3R 20708808 intron Oamb - chr3R 20708889 intron Oamb - chr3R_8_20705001 chr3R_20705001 RAL-907 2047 chr3R 20730930 20731059 chr3R 20731041 20731167 6 107 0.0 0.0 0.0 6.0 237 chr3R 20730930 intergenic not near genes chr3R 20731048 intergenic not near genes chr3R 20731167 intergenic CG31205 + chr3R_6_20730001 chr3R_20730001 RAL-907 2048 chr3R 20739559 20739612 chr3R 20739697 20739718 11 134 10.5 9.0 9.8 1.0 159 chr3R 20739559 intergenic CG17267 - chr3R 20739638 intergenic CG42322 + chr3R 20739718 intergenic CG42322 + chr3R_11_20735001 chr3R_20735001 RAL-907 2049 chr3R 20767516 20767520 chr3R 20767604 20767631 6 106 6.0 3.5 4.8 1.0 115 chr3R 20767516 intron Syp + chr3R 20767574 intron Syp + chr3R 20767631 intron Syp + chr3R_6_20765001 chr3R_20765001 RAL-907 2050 chr3R 20787430 20787453 chr3R 20787541 20787564 8 110 1.5 6.5 4.0 1.6 134 chr3R 20787430 intron Syp + chr3R 20787497 intron Syp + chr3R 20787564 intron Syp + chr3R_8_20785001 chr3R_20785001 RAL-907 2051 chr3R 20850065 20850089 chr3R 20850170 20850193 6 105 9.0 12.5 10.8 0.5 128 chr3R 20850065 intergenic RpS30 + chr3R 20850129 intergenic RpS30 + chr3R 20850193 intergenic RpS30 + chr3R_6_20850001 chr3R_20850001 RAL-907 2052 chr3R 20870248 20870284 chr3R 20870350 20870382 8 100 5.5 6.5 6.0 1.1 134 chr3R 20870248 intergenic not near genes chr3R 20870315 intergenic not near genes chr3R 20870382 intergenic not near genes chr3R_8_20870001 chr3R_20870001 RAL-907 2053 chr3R 20878367 20878386 chr3R 20878473 20878487 8 105 12.0 3.5 7.8 0.9 120 chr3R 20878367 intergenic TotZ +,CR44048 - chr3R 20878427 3` UTR CR44048 - chr3R 20878487 3` UTR CR44048 - chr3R_8_20875001 chr3R_20875001 RAL-907 2054 chr3R 20899900 20899933 chr3R 20900016 20900049 4 116 22.5 22.5 22.5 0.2 149 chr3R 20899900 intergenic not near genes chr3R 20899974 intergenic not near genes chr3R 20900049 intergenic not near genes chr3R_4_20895001 chr3R_20895001 RAL-907 2055 chr3R 20958387 20958418 chr3R 20958501 20958539 9 118 9.5 8.0 8.8 0.9 152 chr3R 20958387 intron Atpalpha + chr3R 20958463 intron Atpalpha + chr3R 20958539 intron Atpalpha + chr3R_9_20955001 chr3R_20955001 RAL-907 2056 chr3R 20966128 20966155 chr3R 20966231 20966258 5 101 6.5 12.0 9.2 0.5 130 chr3R 20966128 intron Atpalpha + chr3R 20966193 intron Atpalpha + chr3R 20966258 intron Atpalpha + chr3R_5_20965001 chr3R_20965001 RAL-907 2057 chr3R 21013996 21014016 chr3R 21014094 21014114 5 98 6.5 5.5 6.0 0.7 118 chr3R 21013996 3` UTR Calx + chr3R 21014055 3` UTR Calx + chr3R 21014114 3` UTR Calx + chr3R_5_21010001 chr3R_21010001 RAL-907 2058 chr3R 21014018 21014043 chr3R 21014088 21014141 5 91 5.0 5.5 5.2 0.8 123 chr3R 21014018 3` UTR Calx + chr3R 21014080 3` UTR Calx + chr3R 21014141 3` UTR Calx + chr3R_5_21010001 chr3R_21010001 RAL-907 2059 chr3R 21020378 21020432 chr3R 21020474 21020528 14 94 11.5 11.5 11.5 1.1 150 chr3R 21020378 3` UTR Rlip + chr3R 21020453 3` UTR Rlip + chr3R 21020528 3` UTR Rlip + chr3R_14_21020001 chr3R_21020001 RAL-907 2060 chr3R 21048386 21048412 chr3R 21051407 21051443 5 3023 20.0 26.0 23.0 0.2 3057 chr3R 21048386 exon CG7079 - chr3R 21049914 intergenic CG17279 - chr3R 21051443 3` UTR Mvl - chr3R_5_21045001 chr3R_21045001 RAL-907 2061 chr3R 21108019 21108064 chr3R 21108300 21108329 7 279 1.5 2.0 1.8 2.5 310 chr3R 21108019 intergenic Sec15 -,rtet + chr3R 21108174 intergenic Sec15 -,rtet + chr3R 21108329 intergenic rtet +,Sec15 - chr3R_7_21105001 chr3R_21105001 RAL-907 2062 chr3R 21129803 21130011 chr3R 21129912 21130108 7 100 5.5 5.0 5.2 1.1 305 chr3R 21129803 intergenic Obp93a -,CG5793 +,Ice2 + chr3R 21129956 intergenic Obp93a -,Ice2 +,CG5793 + chr3R 21130108 intergenic Ice2 +,Obp93a - chr3R_7_21125001 chr3R_21125001 RAL-907 2063 chr3R 21132624 21132647 chr3R 21132717 21132751 5 102 19.5 20.0 19.8 0.2 127 chr3R 21132624 3` UTR Ice2 + chr3R 21132688 3` UTR Ice2 + chr3R 21132751 3` UTR CG7009 - chr3R_5_21130001 chr3R_21130001 RAL-907 2064 chr3R 21154532 21154587 chr3R 21154757 21154822 9 233 3.5 0.0 1.8 3.2 290 chr3R 21154532 intron SNF4Agamma + chr3R 21154677 intron SNF4Agamma + chr3R 21154822 intron SNF4Agamma + chr3R_9_21150001 chr3R_21150001 RAL-907 2065 chr3R 21240447 21240478 chr3R 21240538 21240590 6 108 2.5 4.0 3.2 1.4 143 chr3R 21240447 intergenic not near genes chr3R 21240518 intergenic not near genes chr3R 21240590 intergenic not near genes chr3R_6_21240001 chr3R_21240001 RAL-907 2066 chr3R 21385938 21385963 chr3R 21386024 21386030 7 87 3.5 8.0 5.8 1.0 92 chr3R 21385938 intergenic not near genes chr3R 21385984 intergenic not near genes chr3R 21386030 intergenic not near genes chr3R_7_21385001 chr3R_21385001 RAL-907 2067 chr3R 21388913 21388930 chr3R 21389005 21389037 5 106 3.5 3.0 3.2 1.2 124 chr3R 21388913 5` UTR bap + chr3R 21388975 5` UTR bap + chr3R 21389037 exon bap + chr3R_5_21385001 chr3R_21385001 RAL-907 2068 chr3R 21413930 21413952 chr3R 21414016 21414037 4 96 10.0 10.5 10.2 0.4 107 chr3R 21413930 intron lbl - chr3R 21413984 intron lbl - chr3R 21414037 intron lbl - chr3R_4_21410001 chr3R_21410001 RAL-907 2069 chr3R 21464389 21464427 chr3R 21464495 21464531 5 105 12.0 11.0 11.5 0.4 142 chr3R 21464389 intergenic not near genes chr3R 21464460 intergenic not near genes chr3R 21464531 intergenic not near genes chr3R_5_21460001 chr3R_21460001 RAL-907 2070 chr3R 21472017 21472032 chr3R 21472096 21472133 7 90 3.5 7.0 5.2 1.1 116 chr3R 21472017 intergenic not near genes chr3R 21472075 intergenic not near genes chr3R 21472133 intergenic not near genes chr3R_7_21470001 chr3R_21470001 RAL-907 2071 chr3R 21506852 21506911 chr3R 21506958 21507011 5 105 16.0 13.5 14.8 0.3 159 chr3R 21506852 intron C15 + chr3R 21506932 intron C15 + chr3R 21507011 intron C15 + chr3R_5_21505001 chr3R_21505001 RAL-907 2072 chr3R 21517998 21518253 chr3R 21518147 21518346 7 141 5.5 3.5 4.5 1.3 348 chr3R 21517998 intergenic not near genes chr3R 21518172 intergenic not near genes chr3R 21518346 intergenic not near genes chr3R_7_21515001 chr3R_21515001 RAL-907 2073 chr3R 21519970 21520137 chr3R 21520091 21520235 24 118 1.5 1.5 1.5 9.6 265 chr3R 21519970 intergenic not near genes chr3R 21520102 intergenic not near genes chr3R 21520235 intergenic not near genes chr3R_24_21520001 chr3R_21520001 RAL-907 2074 chr3R 21624084 21624120 chr3R 21624196 21624234 9 113 7.0 10.5 8.8 0.9 150 chr3R 21624084 exon E2f - chr3R 21624159 intron E2f - chr3R 21624234 intron E2f - chr3R_9_21620001 chr3R_21620001 RAL-907 2075 chr3R 21651235 21651268 chr3R 21651333 21651366 8 98 16.5 11.0 13.8 0.5 131 chr3R 21651235 intron E2f - chr3R 21651300 intron E2f - chr3R 21651366 intron E2f - chr3R_8_21650001 chr3R_21650001 RAL-907 2076 chr3R 21672709 21672728 chr3R 21672814 21672833 9 105 3.0 6.0 4.5 1.6 124 chr3R 21672709 3` UTR CG31176 - chr3R 21672771 3` UTR CG31176 - chr3R 21672833 3` UTR CG31176 - chr3R_9_21670001 chr3R_21670001 RAL-907 2077 chr3R 21731783 21731836 chr3R 21731911 21731963 11 126 4.0 0.0 2.0 3.7 180 chr3R 21731783 intergenic not near genes chr3R 21731873 intergenic not near genes chr3R 21731963 intergenic not near genes chr3R_11_21730001 chr3R_21730001 RAL-907 2078 chr3R 21761104 21761155 chr3R 21768515 21768539 mdg1 6 7406 2.5 5.5 4.0 1.2 7435 chr3R 21761104 exon CG42335 + chr3R 21764822 intron CG42335 + chr3R 21768539 exon CG42335 + chr3R_6_21760001 chr3R_21760001 RAL-907 2079 chr3R 21800469 21800516 chr3R 21800574 21800607 8 102 5.5 5.5 5.5 1.2 138 chr3R 21800469 intron CASK - chr3R 21800538 intron CASK - chr3R 21800607 intron CASK - chr3R_8_21800001 chr3R_21800001 RAL-907 2080 chr3R 7773344 7773344 chr3R 21820844 21820846 6 14047501 16.5 6.5 11.5 0.5 14047502 chr3R 7773344 intergenic not near genes chr3R 14797095 exon CG14855 + chr3R 21820846 5` UTR CASK - chr3R_6_14795001 chr3R_14795001 RAL-907 2081 chr3R 21903618 21903626 chr3R 21903735 21903743 4 117 0.0 4.0 2.0 1.3 125 chr3R 21903618 intron CG6678 + chr3R 21903680 intron CG6678 + chr3R 21903743 intron CG6678 + chr3R_4_21900001 chr3R_21900001 RAL-907 2082 chr3R 21907535 21907535 chr3R 28831801 28831801 4 6924266 15.5 15.5 15.5 0.2 6924266 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831801 intron WASp - chr3R_4_25365001 chr3R_25365001 RAL-907 2083 chr3R 21907536 21907536 chr3R 28831801 28831802 9 6924266 15.5 15.5 15.5 0.5 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_9_25365001 chr3R_25365001 RAL-907 2084 chr3R 21937210 21937234 chr3R 21937307 21937331 9 96 5.5 5.5 5.5 1.4 121 chr3R 21937210 intergenic not near genes chr3R 21937270 intergenic not near genes chr3R 21937331 intergenic not near genes chr3R_9_21935001 chr3R_21935001 RAL-907 2085 chr3R 21963105 21963158 chr3R 21963202 21963255 6 97 14.0 16.0 15.0 0.4 150 chr3R 21963105 intron Eip93F + chr3R 21963180 intron Eip93F + chr3R 21963255 intron Eip93F + chr3R_6_21960001 chr3R_21960001 RAL-907 2086 chr3R 21985207 21985251 chr3R 21985332 21985335 5 117 2.5 1.5 2.0 1.7 128 chr3R 21985207 intron Eip93F + chr3R 21985271 intron Eip93F + chr3R 21985335 intron Eip93F + chr3R_5_21985001 chr3R_21985001 RAL-907 2087 chr3R 22161922 22161971 chr3R 22163003 22163052 11 1080 6.0 4.0 5.0 1.8 1130 chr3R 22161922 intron SKIP + chr3R 22162487 intron SKIP + chr3R 22163052 intron SKIP + chr3R_11_22160001 chr3R_22160001 RAL-907 2088 chr3R 22200887 22200931 chr3R 22200990 22201033 5 103 6.5 10.0 8.2 0.5 146 chr3R 22200887 intron,intron SKIP +,CR45224 - chr3R 22200960 intron,intron SKIP +,CR45224 - chr3R 22201033 intron,intron SKIP +,CR45224 - chr3R_5_22200001 chr3R_22200001 RAL-907 2089 chr3R 22234687 22234714 chr3R 22236026 22236043 pogo 7 1337 2.0 10.5 6.2 1.0 1356 chr3R 22234687 intron SKIP + chr3R 22235365 intron SKIP + chr3R 22236043 intron SKIP + chr3R_7_22235001 chr3R_22235001 RAL-907 2090 chr3R 22272340 22272368 chr3R 22272432 22272470 4 92 13.5 13.0 13.2 0.3 130 chr3R 22272340 intron SKIP + chr3R 22272405 intron SKIP + chr3R 22272470 intron SKIP + chr3R_4_22270001 chr3R_22270001 RAL-907 2091 chr3R 22347875 22347902 chr3R 22347970 22348000 5 97 5.5 7.0 6.2 0.7 125 chr3R 22347875 intergenic not near genes chr3R 22347938 intergenic not near genes chr3R 22348000 intergenic not near genes chr3R_5_22345001 chr3R_22345001 RAL-907 2092 chr3R 22368930 22368955 chr3R 22369053 22369078 4 120 2.5 7.0 4.8 0.7 148 chr3R 22368930 intron PyK + chr3R 22369004 intron PyK + chr3R 22369078 intron PyK + chr3R_4_22365001 chr3R_22365001 RAL-907 2093 chr3R 22433091 22433100 chr3R 22433200 22433204 5 114 3.5 11.0 7.2 0.6 113 chr3R 22433091 intron CG13847 - chr3R 22433148 intron CG13847 - chr3R 22433204 intron CG13847 - chr3R_5_22430001 chr3R_22430001 RAL-907 2094 chr3R 22450543 22450574 chr3R 22453195 22453195 NOF 5 2646 3.0 6.5 4.8 0.9 2652 chr3R 22450543 intron CG34376 + chr3R 22451869 intron CG34376 + chr3R 22453195 intron CG34376 + chr3R_5_22450001 chr3R_22450001 RAL-907 2095 chr3R 22464503 22464532 chr3R 22464631 22464660 6 128 18.0 19.0 18.5 0.3 157 chr3R 22464503 3` UTR AP-2mu + chr3R 22464582 3` UTR AP-2mu + chr3R 22464660 intergenic AP-2mu +,CG7054 + chr3R_6_22460001 chr3R_22460001 RAL-907 2096 chr3R 22597358 22597385 chr3R 22597452 22597473 4 88 3.0 0.0 1.5 1.6 115 chr3R 22597358 intron Efa6 + chr3R 22597416 intron Efa6 + chr3R 22597473 intron Efa6 + chr3R_4_22595001 chr3R_22595001 RAL-907 2097 chr3R 22675166 22675206 chr3R 22675292 22675331 6 123 7.0 10.0 8.5 0.6 165 chr3R 22675166 intron wake + chr3R 22675248 intron wake + chr3R 22675331 intron wake + chr3R_6_22675001 chr3R_22675001 RAL-907 2098 chr3R 22779461 22779502 chr3R 22779559 22779577 4 92 4.5 4.5 4.5 0.7 116 chr3R 22779461 intron,3` UTR CG7029 +,CR43654 - chr3R 22779519 intron,3` UTR CG7029 +,CR43654 - chr3R 22779577 intron,3` UTR CG7029 +,CR43654 - chr3R_4_22775001 chr3R_22775001 RAL-907 2099 chr3R 22797784 22797938 chr3R 22797844 22798054 10 107 0.0 0.0 0.0 10.0 270 chr3R 22797784 intergenic not near genes chr3R 22797919 intergenic not near genes chr3R 22798054 intergenic not near genes chr3R_10_22795001 chr3R_22795001 RAL-907 2100 chr3R 22827407 22827415 chr3R 22827501 22827511 4 93 5.5 5.5 5.5 0.6 104 chr3R 22827407 intergenic CR44350 - chr3R 22827459 intergenic CR44350 - chr3R 22827511 intergenic CR44350 - chr3R_4_22825001 chr3R_22825001 RAL-907 2101 chr3R 22827422 22827446 chr3R 22827498 22827524 4 86 4.5 5.5 5.0 0.7 102 chr3R 22827422 intergenic CR44350 - chr3R 22827473 intergenic CR44350 - chr3R 22827524 intergenic CR44350 - chr3R_4_22825001 chr3R_22825001 RAL-907 2102 chr3R 22880923 22880958 chr3R 22881081 22881116 8 157 7.5 7.5 7.5 0.9 193 chr3R 22880923 intergenic not near genes chr3R 22881020 intergenic not near genes chr3R 22881116 intergenic not near genes chr3R_8_22880001 chr3R_22880001 RAL-907 2103 chr3R 22953826 22953855 chr3R 22954479 22954511 6 659 5.0 5.5 5.2 1.0 685 chr3R 22953826 intron klg + chr3R 22954168 intron klg + chr3R 22954511 intron klg + chr3R_6_22950001 chr3R_22950001 RAL-907 2104 chr3R 23073645 23073664 chr3R 23073746 23073748 4 99 11.0 5.0 8.0 0.4 103 chr3R 23073645 intron CG13830 - chr3R 23073696 intron CG13830 - chr3R 23073748 intron CG13830 - chr3R_4_23070001 chr3R_23070001 RAL-907 2105 chr3R 23161898 23161945 chr3R 23162014 23162062 12 116 5.0 4.5 4.8 2.1 164 chr3R 23161898 intergenic not near genes chr3R 23161980 intergenic not near genes chr3R 23162062 intergenic not near genes chr3R_12_23160001 chr3R_23160001 RAL-907 2106 chr3R 23260947 23260963 chr3R 23261043 23261065 5 95 3.5 2.5 3.0 1.2 118 chr3R 23260947 3` UTR orb - chr3R 23261006 3` UTR orb - chr3R 23261065 3` UTR orb - chr3R_5_23260001 chr3R_23260001 RAL-907 2107 chr3R 23324012 23324055 chr3R 23324118 23324161 9 106 16.5 14.5 15.5 0.5 149 chr3R 23324012 intron pnt - chr3R 23324086 intron pnt - chr3R 23324161 intron pnt - chr3R_9_23320001 chr3R_23320001 RAL-907 2108 chr3R 23356995 23357012 chr3R 23357101 23357118 6 106 10.5 11.0 10.8 0.5 123 chr3R 23356995 intron Sec13 + chr3R 23357056 intron Sec13 + chr3R 23357118 intron Sec13 + chr3R_6_23355001 chr3R_23355001 RAL-907 2109 chr3R 23385578 23385621 chr3R 23385720 23385764 5 142 1.5 0.5 1.0 2.5 186 chr3R 23385578 intergenic not near genes chr3R 23385671 intergenic not near genes chr3R 23385764 intergenic not near genes chr3R_5_23385001 chr3R_23385001 RAL-907 2110 chr3R 23390947 23390950 chr3R 23391049 23391052 4 102 4.0 0.0 2.0 1.3 105 chr3R 23390947 intergenic CR43387 + chr3R 23391000 intergenic CR43387 + chr3R 23391052 intergenic CR43387 + chr3R_4_23390001 chr3R_23390001 RAL-907 2111 chr3R 23423207 23423246 chr3R 23423346 23423379 6 138 4.5 6.5 5.5 0.9 172 chr3R 23423207 intron CG4374 - chr3R 23423293 intron CG4374 - chr3R 23423379 intron CG4374 - chr3R_6_23420001 chr3R_23420001 RAL-907 2112 chr3R 23528244 23528283 chr3R 23528352 23528383 7 106 1.5 5.0 3.2 1.7 139 chr3R 23528244 intron CG10175 - chr3R 23528314 intron CG10175 - chr3R 23528383 intron CG10175 - chr3R_7_23525001 chr3R_23525001 RAL-907 2113 chr3R 23536934 23536965 chr3R 23537134 23537139 6 196 7.5 5.5 6.5 0.8 205 chr3R 23536934 intergenic CG10168 -,CG16732 - chr3R 23537036 3` UTR CG10168 - chr3R 23537139 exon CG10168 - chr3R_6_23535001 chr3R_23535001 RAL-907 2114 chr3R 23558381 23558428 chr3R 23560182 23560228 Bari1 9 1801 3.0 4.5 3.8 1.9 1847 chr3R 23558381 intron beat-IV + chr3R 23559304 intron beat-IV + chr3R 23560228 intron beat-IV + chr3R_9_23555001 chr3R_23555001 RAL-907 2115 chr3R 23565844 23565860 chr3R 23565951 23565967 6 107 1.5 1.5 1.5 2.4 123 chr3R 23565844 intron beat-IV + chr3R 23565906 intron beat-IV + chr3R 23565967 intron beat-IV + chr3R_6_23565001 chr3R_23565001 RAL-907 2116 chr3R 23627532 23627642 chr3R 23627629 23627741 9 85 0.0 0.0 0.0 9.0 209 chr3R 23627532 intron CG31145 - chr3R 23627636 intron CG31145 - chr3R 23627741 intron CG31145 - chr3R_9_23625001 chr3R_23625001 RAL-907 2117 chr3R 23640833 23640870 chr3R 23641262 23641269 5 415 3.5 7.5 5.5 0.8 436 chr3R 23640833 intron CG31145 - chr3R 23641051 intron CG31145 - chr3R 23641269 intron CG31145 - chr3R_5_23640001 chr3R_23640001 RAL-907 2118 chr3R 23725438 23725490 chr3R 23725536 23725590 14 99 6.0 9.0 7.5 1.6 152 chr3R 23725438 intron CG10365 + chr3R 23725514 intron CG10365 + chr3R 23725590 intron CG10365 + chr3R_14_23725001 chr3R_23725001 RAL-907 2119 chr3R 23783619 23783662 chr3R 23783715 23783740 12 94 6.0 7.5 6.8 1.5 121 chr3R 23783619 intron mbc + chr3R 23783680 intron mbc + chr3R 23783740 intron mbc + chr3R_12_23780001 chr3R_23780001 RAL-907 2120 chr3R 23801556 23801584 chr3R 23801664 23801692 6 108 5.0 1.0 3.0 1.5 136 chr3R 23801556 3` UTR mbc + chr3R 23801624 3` UTR mbc + chr3R 23801692 intergenic CG33111 -,mbc + chr3R_6_23800001 chr3R_23800001 RAL-907 2121 chr3R 23820633 23820654 chr3R 23820732 23820758 6 102 4.5 7.0 5.8 0.9 125 chr3R 23820633 5` UTR CG34355 + chr3R 23820696 5` UTR CG34355 + chr3R 23820758 5` UTR CG34355 + chr3R_6_23820001 chr3R_23820001 RAL-907 2122 chr3R 23831214 23831248 chr3R 23831446 23831480 9 232 3.0 5.5 4.2 1.7 266 chr3R 23831214 intron CG34355 + chr3R 23831347 intron CG34355 + chr3R 23831480 intron CG34355 + chr3R_9_23830001 chr3R_23830001 RAL-907 2123 chr3R 23835388 23835431 chr3R 23844558 23844601 roo 12 9174 3.5 0.5 2.0 4.0 9213 chr3R 23835388 intron CG34355 + chr3R 23839994 intron CG34355 + chr3R 23844601 intron CG34355 + chr3R_12_23835001 chr3R_23835001 RAL-907 2124 chr3R 23868207 23868235 chr3R 23868295 23868333 8 95 1.5 3.5 2.5 2.3 126 chr3R 23868207 intron Pli - chr3R 23868270 intron Pli - chr3R 23868333 intron Pli - chr3R_8_23865001 chr3R_23865001 RAL-907 2125 chr3R 23888067 23888114 chr3R 23888173 23888220 9 102 15.0 13.0 14.0 0.6 153 chr3R 23888067 intron Pli - chr3R 23888144 intron Pli - chr3R 23888220 intron Pli - chr3R_9_23885001 chr3R_23885001 RAL-907 2126 chr3R 23944897 23944929 chr3R 23945002 23945020 5 98 9.5 12.5 11.0 0.4 123 chr3R 23944897 intron CG12268 - chr3R 23944958 intron CG12268 - chr3R 23945020 exon CG12268 - chr3R_5_23940001 chr3R_23940001 RAL-907 2127 chr3R 23949021 23949067 chr3R 23949118 23949164 10 94 3.5 4.0 3.8 2.1 143 chr3R 23949021 intergenic not near genes chr3R 23949092 intergenic not near genes chr3R 23949164 intergenic not near genes chr3R_10_23945001 chr3R_23945001 RAL-907 2128 chr3R 23955368 23955379 chr3R 23955455 23955480 4 98 7.0 13.0 10.0 0.4 112 chr3R 23955368 intron Aats-glupro - chr3R 23955424 intron Aats-glupro - chr3R 23955480 intron Aats-glupro - chr3R_4_23955001 chr3R_23955001 RAL-907 2129 chr3R 24021611 24021653 chr3R 24021721 24021763 15 110 12.0 11.5 11.8 1.2 152 chr3R 24021611 intron KrT95D - chr3R 24021687 intron KrT95D - chr3R 24021763 intron KrT95D - chr3R_15_24020001 chr3R_24020001 RAL-907 2130 chr3R 24072082 24072108 chr3R 24072539 24072540 jockey 4 451 5.5 3.5 4.5 0.7 458 chr3R 24072082 intron 4EHP - chr3R 24072311 intron 4EHP - chr3R 24072540 intron 4EHP - chr3R_4_24070001 chr3R_24070001 RAL-907 2131 chr3R 24076918 24076923 chr3R 24078405 24078410 hobo 4 1487 4.0 4.5 4.2 0.8 1492 chr3R 24076918 intron 4EHP - chr3R 24077664 intron 4EHP - chr3R 24078410 intron 4EHP - chr3R_4_24075001 chr3R_24075001 RAL-907 2132 chr3R 24076925 24076947 chr3R 24078404 24078419 hobo 5 1480 3.0 4.5 3.8 1.0 1494 chr3R 24076925 intron 4EHP - chr3R 24077672 intron 4EHP - chr3R 24078419 intron 4EHP - chr3R_5_24075001 chr3R_24075001 RAL-907 2133 chr3R 24100439 24100485 chr3R 24100554 24100600 5 115 3.0 6.5 4.8 0.9 161 chr3R 24100439 intron 4EHP - chr3R 24100520 intron 4EHP - chr3R 24100600 intron 4EHP - chr3R_5_24100001 chr3R_24100001 RAL-907 2134 chr3R 24116668 24116685 chr3R 24116765 24116786 8 98 12.5 6.0 9.2 0.8 118 chr3R 24116668 intron Rootletin + chr3R 24116727 intron Rootletin + chr3R 24116786 intron Rootletin + chr3R_8_24115001 chr3R_24115001 RAL-907 2135 chr3R 24199731 24199770 chr3R 24199831 24199870 8 99 8.0 8.5 8.2 0.9 139 chr3R 24199731 intron twin - chr3R 24199800 intron twin - chr3R 24199870 intron twin - chr3R_8_24195001 chr3R_24195001 RAL-907 2136 chr3R 24207197 24207241 chr3R 24212293 24212321 flea 6 5092 7.0 11.5 9.2 0.6 5124 chr3R 24207197 intron twin - chr3R 24209759 intron twin - chr3R 24212321 intron twin - chr3R_6_24205001 chr3R_24205001 RAL-907 2137 chr3R 24426271 24426294 chr3R 24426545 24426552 4 272 12.0 9.5 10.8 0.3 281 chr3R 24426271 intron nAChRalpha1 - chr3R 24426412 intron nAChRalpha1 - chr3R 24426552 intron nAChRalpha1 - chr3R_4_24425001 chr3R_24425001 RAL-907 2138 chr3R 24431581 24431626 chr3R 24431680 24431725 16 99 4.5 0.0 2.2 5.0 144 chr3R 24431581 intron nAChRalpha1 - chr3R 24431653 intron nAChRalpha1 - chr3R 24431725 intron nAChRalpha1 - chr3R_16_24430001 chr3R_24430001 RAL-907 2139 chr3R 24434228 24434265 chr3R 24434319 24434342 12 92 2.5 2.5 2.5 3.4 114 chr3R 24434228 intron nAChRalpha1 - chr3R 24434285 intron nAChRalpha1 - chr3R 24434342 intron nAChRalpha1 - chr3R_12_24430001 chr3R_24430001 RAL-907 2140 chr3R 24493264 24493307 chr3R 24493513 24493539 BS 8 247 3.0 5.0 4.0 1.6 275 chr3R 24493264 intergenic not near genes chr3R 24493402 intergenic not near genes chr3R 24493539 intergenic not near genes chr3R_8_24490001 chr3R_24490001 RAL-907 2141 chr3R 24527788 24527835 chr3R 24527899 24527941 9 109 6.5 6.5 6.5 1.2 153 chr3R 24527788 intergenic CG13618 +,CG6607 + chr3R 24527864 intergenic CG6607 +,CG13618 + chr3R 24527941 intergenic CG6607 +,CG13618 + chr3R_9_24525001 chr3R_24525001 RAL-907 2142 chr3R 24545862 24545883 chr3R 24546021 24546042 6 158 15.0 15.0 15.0 0.4 180 chr3R 24545862 intron Esyt2 + chr3R 24545952 intron Esyt2 + chr3R 24546042 intron Esyt2 + chr3R_6_24545001 chr3R_24545001 RAL-907 2143 chr3R 24573652 24573695 chr3R 24573762 24573805 7 109 17.5 13.5 15.5 0.4 153 chr3R 24573652 intron CG13624 - chr3R 24573728 intron CG13624 - chr3R 24573805 intron CG13624 - chr3R_7_24570001 chr3R_24570001 RAL-907 2144 chr3R 24612880 24612905 chr3R 24612968 24613003 4 96 11.5 15.0 13.2 0.3 123 chr3R 24612880 intron mld + chr3R 24612942 intron mld + chr3R 24613003 intron mld + chr3R_4_24610001 chr3R_24610001 RAL-907 2145 chr3R 24667592 24667626 chr3R 24667689 24667723 12 97 4.0 0.5 2.2 3.8 131 chr3R 24667592 intron slo + chr3R 24667658 intron slo + chr3R 24667723 intron slo + chr3R_12_24665001 chr3R_24665001 RAL-907 2146 chr3R 24670032 24670198 chr3R 24670162 24670303 18 113 1.5 3.0 2.2 5.6 271 chr3R 24670032 intron slo + chr3R 24670168 intron slo + chr3R 24670303 intron slo + chr3R_18_24670001 chr3R_24670001 RAL-907 2147 chr3R 24842099 24842127 chr3R 24842193 24842233 6 102 10.0 11.5 10.8 0.5 134 chr3R 24842099 5` UTR Esp + chr3R 24842166 5` UTR Esp + chr3R 24842233 5` UTR Esp + chr3R_6_24840001 chr3R_24840001 RAL-907 2148 chr3R 24854867 24854914 chr3R 24854969 24855016 8 102 8.5 11.5 10.0 0.7 149 chr3R 24854867 3` UTR,3` UTR nct +,HdacX - chr3R 24854942 3` UTR HdacX - chr3R 24855016 3` UTR HdacX - chr3R_8_24850001 chr3R_24850001 RAL-907 2149 chr3R 24893455 24893490 chr3R 24893545 24893590 18 99 3.0 2.0 2.5 5.1 135 chr3R 24893455 intron CG31121 - chr3R 24893522 intron CG31121 - chr3R 24893590 intron CG31121 - chr3R_18_24890001 chr3R_24890001 RAL-907 2150 chr3R 24927108 24927145 chr3R 24931919 24931956 Doc 11 4810 7.0 3.0 5.0 1.8 4848 chr3R 24927108 intergenic Trf4-2 + chr3R 24929532 intergenic not near genes chr3R 24931956 intergenic CG11771 + chr3R_11_24925001 chr3R_24925001 RAL-907 2151 chr3R 24974894 24974933 chr3R 24974993 24975032 14 98 2.5 4.5 3.5 3.1 138 chr3R 24974894 intergenic not near genes chr3R 24974963 intergenic not near genes chr3R 24975032 intergenic not near genes chr3R_14_24970001 chr3R_24970001 RAL-907 2152 chr3R 25004904 25004916 chr3R 25005007 25005019 4 103 0.5 3.5 2.0 1.3 115 chr3R 25004904 intron tnc + chr3R 25004962 intron tnc + chr3R 25005019 intron tnc + chr3R_4_25000001 chr3R_25000001 RAL-907 2153 chr3R 25018270 25018283 chr3R 25018335 25018366 6 78 6.0 6.5 6.2 0.8 96 chr3R 25018270 exon tnc + chr3R 25018318 exon tnc + chr3R 25018366 exon tnc + chr3R_6_25015001 chr3R_25015001 RAL-907 2154 chr3R 25027521 25027564 chr3R 25027754 25027791 5 232 8.5 6.5 7.5 0.6 270 chr3R 25027521 intron Hr96 + chr3R 25027656 intron Hr96 + chr3R 25027791 intron Hr96 + chr3R_5_25025001 chr3R_25025001 RAL-907 2155 chr3R 25072744 25072783 chr3R 25072855 25072895 11 111 12.0 8.5 10.2 1.0 151 chr3R 25072744 3` UTR CG9996 - chr3R 25072820 3` UTR CG9996 - chr3R 25072895 exon CG9996 - chr3R_11_25070001 chr3R_25070001 RAL-907 2156 chr3R 25159488 25159539 chr3R 25159596 25159606 11 99 7.5 6.5 7.0 1.4 118 chr3R 25159488 intergenic not near genes chr3R 25159547 intergenic not near genes chr3R 25159606 intergenic not near genes chr3R_11_25155001 chr3R_25155001 RAL-907 2157 chr3R 25166239 25166390 chr3R 25166339 25166486 12 97 0.0 0.0 0.0 12.0 247 chr3R 25166239 intergenic not near genes chr3R 25166362 intergenic not near genes chr3R 25166486 intergenic not near genes chr3R_12_25165001 chr3R_25165001 RAL-907 2158 chr3R 25209581 25209630 chr3R 25209683 25209699 13 95 0.0 1.5 0.8 7.2 118 chr3R 25209581 intron CG13654 + chr3R 25209640 intron CG13654 + chr3R 25209699 intron CG13654 + chr3R_13_25205001 chr3R_25205001 RAL-907 2159 chr3R 25235680 25235829 chr3R 25235790 25235929 11 109 12.0 7.5 9.8 1.0 249 chr3R 25235680 intergenic CG10420 - chr3R 25235804 intergenic CG10420 - chr3R 25235929 intergenic CG10420 - chr3R_11_25235001 chr3R_25235001 RAL-907 2160 chr3R 25269207 25269255 chr3R 25269301 25269334 9 93 5.0 5.5 5.2 1.5 127 chr3R 25269207 intron CR45214 - chr3R 25269270 intron CR45214 - chr3R 25269334 intron CR45214 - chr3R_9_25265001 chr3R_25265001 RAL-907 2161 chr3R 25283005 25283054 chr3R 25283228 25283232 10 215 12.5 10.0 11.2 0.8 227 chr3R 25283005 exon CG11892 + chr3R 25283118 3` UTR CG11892 + chr3R 25283232 3` UTR CG11892 + chr3R_10_25280001 chr3R_25280001 RAL-907 2162 chr3R 25368402 25368420 chr3R 25368598 25368617 4 197 6.0 0.0 3.0 1.0 215 chr3R 25368402 intron Fur1 - chr3R 25368510 intron Fur1 - chr3R 25368617 intron Fur1 - chr3R_4_25365001 chr3R_25365001 RAL-907 2163 chr3R 25384754 25384768 chr3R 25384814 25384848 4 68 4.0 6.5 5.2 0.6 94 chr3R 25384754 intron Fur1 - chr3R 25384801 intron Fur1 - chr3R 25384848 intron Fur1 - chr3R_4_25380001 chr3R_25380001 RAL-907 2164 chr3R 25411760 25411804 chr3R 25411876 25411927 7 120 15.5 13.0 14.2 0.5 167 chr3R 25411760 intron Fur1 - chr3R 25411844 intron Fur1 - chr3R 25411927 intron Fur1 - chr3R_7_25410001 chr3R_25410001 RAL-907 2165 chr3R 25424670 25424695 chr3R 25424752 25424786 4 85 10.5 11.0 10.8 0.3 116 chr3R 25424670 intron Fur1 - chr3R 25424728 intron Fur1 - chr3R 25424786 intron Fur1 - chr3R_4_25420001 chr3R_25420001 RAL-907 2166 chr3R 25453789 25453801 chr3R 25453964 25453982 4 184 2.5 12.5 7.5 0.5 193 chr3R 25453789 intron Fur1 - chr3R 25453886 intron Fur1 - chr3R 25453982 intron Fur1 - chr3R_4_25450001 chr3R_25450001 RAL-907 2167 chr3R 25514423 25514450 chr3R 25514524 25514551 13 101 0.0 3.5 1.8 4.6 128 chr3R 25514423 intergenic not near genes chr3R 25514487 intergenic not near genes chr3R 25514551 intergenic not near genes chr3R_13_25510001 chr3R_25510001 RAL-907 2168 chr3R 25519058 25519102 chr3R 25519159 25519203 8 97 10.0 7.0 8.5 0.8 145 chr3R 25519058 intron msi + chr3R 25519130 intron msi + chr3R 25519203 intron msi + chr3R_8_25515001 chr3R_25515001 RAL-907 2169 chr3R 7773344 7773344 chr3R 25538123 25538124 14 17764780 16.5 11.5 14.0 0.9 17764780 chr3R 7773344 intergenic not near genes chr3R 16655734 intergenic modSP - chr3R 25538124 intron msi + chr3R_14_16655001 chr3R_16655001 RAL-907 2170 chr3R 25551791 25551826 chr3R 25551888 25551923 6 95 4.5 6.0 5.2 1.0 132 chr3R 25551791 intron msi + chr3R 25551857 intron msi + chr3R 25551923 intron msi + chr3R_6_25550001 chr3R_25550001 RAL-907 2171 chr3R 25576852 25576869 chr3R 25576951 25576963 4 105 5.0 5.5 5.2 0.6 111 chr3R 25576852 intron msi + chr3R 25576908 intron msi + chr3R 25576963 intron msi + chr3R_4_25575001 chr3R_25575001 RAL-907 2172 chr3R 25692032 25692071 chr3R 25692138 25692178 8 107 3.5 7.0 5.2 1.3 146 chr3R 25692032 intergenic not near genes chr3R 25692105 intergenic not near genes chr3R 25692178 intergenic not near genes chr3R_8_25690001 chr3R_25690001 RAL-907 2173 chr3R 25725807 25725860 chr3R 25734987 25735040 roo 8 9180 4.0 2.0 3.0 2.0 9233 chr3R 25725807 intron LpR2 - chr3R 25730424 intron LpR2 - chr3R 25735040 intron LpR2 - chr3R_8_25730001 chr3R_25730001 RAL-907 2174 chr3R 25801256 25801292 chr3R 25802252 25802284 6 998 11.0 5.5 8.2 0.7 1028 chr3R 25801256 intergenic not near genes chr3R 25801770 intergenic not near genes chr3R 25802284 intergenic not near genes chr3R_6_25800001 chr3R_25800001 RAL-907 2175 chr3R 25843623 25843668 chr3R 25843773 25843818 5 150 9.0 12.0 10.5 0.4 195 chr3R 25843623 intergenic CR45653 + chr3R 25843720 intergenic CR45653 + chr3R 25843818 intergenic CR45653 + chr3R_5_25840001 chr3R_25840001 RAL-907 2176 chr3R 25863928 25863968 chr3R 25864036 25864076 9 107 9.0 8.5 8.8 0.9 148 chr3R 25863928 intron CG5890 + chr3R 25864002 intron CG5890 + chr3R 25864076 intron CG5890 + chr3R_9_25860001 chr3R_25860001 RAL-907 2177 chr3R 25871078 25871120 chr3R 25871233 25871275 4 154 2.0 2.5 2.2 1.2 197 chr3R 25871078 3` UTR CG5890 + chr3R 25871176 3` UTR CG5890 + chr3R 25871275 3` UTR CG5890 + chr3R_4_25870001 chr3R_25870001 RAL-907 2178 chr3R 25927501 25927524 chr3R 25927603 25927626 4 102 13.0 3.5 8.2 0.4 125 chr3R 25927501 intron CCAP-R - chr3R 25927564 intron CCAP-R - chr3R 25927626 intron CCAP-R - chr3R_4_25925001 chr3R_25925001 RAL-907 2179 chr3R 25997236 25997252 chr3R 25997343 25997359 7 107 11.5 8.0 9.8 0.6 123 chr3R 25997236 intergenic CG43116 -,E(spl)mdelta-HLH + chr3R 25997298 intergenic CG43116 -,E(spl)mdelta-HLH + chr3R 25997359 intergenic E(spl)mdelta-HLH +,CG43116 - chr3R_7_25995001 chr3R_25995001 RAL-907 2180 chr3R 26015354 26015371 chr3R 26015486 26015510 4 133 9.0 10.0 9.5 0.4 156 chr3R 26015354 3` UTR Kaz-m1 + chr3R 26015432 3` UTR Kaz-m1 + chr3R 26015510 3` UTR Kaz-m1 + chr3R_4_26015001 chr3R_26015001 RAL-907 2181 chr3R 26060390 26060433 chr3R 26060491 26060539 7 100 7.5 10.5 9.0 0.7 149 chr3R 26060390 intron CG14544 + chr3R 26060464 intron CG14544 + chr3R 26060539 intron CG14544 + chr3R_7_26060001 chr3R_26060001 RAL-907 2182 chr3R 26093826 26093875 chr3R 26093924 26093926 8 91 9.0 10.5 9.8 0.7 100 chr3R 26093826 intron dys - chr3R 26093876 intron dys - chr3R 26093926 intron dys - chr3R_8_26090001 chr3R_26090001 RAL-907 2183 chr3R 26233586 26233619 chr3R 26233860 26233893 12 271 7.0 4.0 5.5 1.8 307 chr3R 26233586 3` UTR CG12290 + chr3R 26233740 3` UTR CG12290 + chr3R 26233893 3` UTR CG12290 + chr3R_12_26230001 chr3R_26230001 RAL-907 2184 chr3R 26239810 26239858 chr3R 26240139 26240189 20 328 4.0 6.0 5.0 3.3 379 chr3R 26239810 intron CR42745 + chr3R 26240000 intron CR42745 + chr3R 26240189 intron CR42745 + chr3R_20_26235001 chr3R_26235001 RAL-907 2185 chr3R 26265799 26265837 chr3R 26265907 26265936 5 106 3.5 3.5 3.5 1.1 137 chr3R 26265799 intron CG6154 + chr3R 26265868 intron CG6154 + chr3R 26265936 intron CG6154 + chr3R_5_26265001 chr3R_26265001 RAL-907 2186 chr3R 26293191 26293230 chr3R 26293300 26293314 11 114 3.0 2.5 2.8 2.9 123 chr3R 26293191 intergenic not near genes chr3R 26293252 intergenic not near genes chr3R 26293314 intergenic not near genes chr3R_11_26290001 chr3R_26290001 RAL-907 2187 chr3R 26295841 26295874 chr3R 26295962 26295970 5 114 4.0 7.0 5.5 0.8 129 chr3R 26295841 intergenic not near genes chr3R 26295906 intergenic not near genes chr3R 26295970 intergenic not near genes chr3R_5_26295001 chr3R_26295001 RAL-907 2188 chr3R 26370322 26370354 chr3R 26370427 26370459 7 105 4.5 8.5 6.5 0.9 137 chr3R 26370322 intergenic not near genes chr3R 26370390 intergenic not near genes chr3R 26370459 intergenic not near genes chr3R_7_26370001 chr3R_26370001 RAL-907 2189 chr3R 26376326 26376345 chr3R 26385483 26385514 roo 4 9157 2.5 4.0 3.2 1.0 9188 chr3R 26376326 intergenic not near genes chr3R 26380920 intergenic not near genes chr3R 26385514 intergenic not near genes chr3R_4_26380001 chr3R_26380001 RAL-907 2190 chr3R 26502293 26502301 chr3R 26502385 26502412 5 104 11.0 7.0 9.0 0.5 119 chr3R 26502293 intron plum - chr3R 26502352 intron plum - chr3R 26502412 intron plum - chr3R_5_26500001 chr3R_26500001 RAL-907 2191 chr3R 26510486 26510535 chr3R 26519566 26519576 roo 12 9067 2.5 4.5 3.5 2.7 9090 chr3R 26510486 intron plum - chr3R 26515031 intron plum - chr3R 26519576 intron plum - chr3R_12_26515001 chr3R_26515001 RAL-907 2192 chr3R 26532934 26532958 chr3R 26533186 26533208 4 252 15.5 10.0 12.8 0.3 274 chr3R 26532934 intron plum - chr3R 26533071 intron plum - chr3R 26533208 intron plum - chr3R_4_26530001 chr3R_26530001 RAL-907 2193 chr3R 26540983 26541031 chr3R 26541083 26541130 8 97 0.0 7.0 3.5 1.8 147 chr3R 26540983 intron scrib + chr3R 26541056 intron scrib + chr3R 26541130 intron scrib + chr3R_8_26540001 chr3R_26540001 RAL-907 2194 chr3R 26542029 26542079 chr3R 26542140 26542185 5 101 1.5 3.5 2.5 1.4 156 chr3R 26542029 intron scrib + chr3R 26542107 intron scrib + chr3R 26542185 intron scrib + chr3R_5_26540001 chr3R_26540001 RAL-907 2195 chr3R 26558326 26558361 chr3R 26565638 26565659 Stalker4 9 7310 2.5 1.5 2.0 3.0 7333 chr3R 26558326 intron scrib + chr3R 26561992 intron scrib + chr3R 26565659 intron scrib + chr3R_9_26560001 chr3R_26560001 RAL-907 2196 chr3R 26641616 26641655 chr3R 26641723 26641762 6 101 5.5 3.0 4.2 1.2 146 chr3R 26641616 intergenic not near genes chr3R 26641689 intergenic not near genes chr3R 26641762 intergenic not near genes chr3R_6_26640001 chr3R_26640001 RAL-907 2197 chr3R 26642721 26642757 chr3R 26643134 26643141 jockey 10 406 4.5 7.0 5.8 1.5 420 chr3R 26642721 intergenic not near genes chr3R 26642931 intergenic not near genes chr3R 26643141 intergenic not near genes chr3R_10_26640001 chr3R_26640001 RAL-907 2198 chr3R 26688846 26688861 chr3R 26688944 26688959 6 97 6.0 9.5 7.8 0.7 113 chr3R 26688846 intergenic not near genes chr3R 26688902 intergenic not near genes chr3R 26688959 intergenic not near genes chr3R_6_26685001 chr3R_26685001 RAL-907 2199 chr3R 26770241 26770271 chr3R 26770338 26770368 5 97 12.0 13.5 12.8 0.4 127 chr3R 26770241 intergenic CR45563 + chr3R 26770304 intergenic CR45563 + chr3R 26770368 intergenic not near genes chr3R_5_26770001 chr3R_26770001 RAL-907 2200 chr3R 26806125 26806168 chr3R 26806242 26806276 5 119 5.0 9.5 7.2 0.6 151 chr3R 26806125 intron Tl + chr3R 26806200 intron Tl + chr3R 26806276 intron Tl + chr3R_5_26805001 chr3R_26805001 RAL-907 2201 chr3R 26810531 26810570 chr3R 26811036 26811075 roo 8 502 6.0 4.5 5.2 1.3 544 chr3R 26810531 intron Tl + chr3R 26810803 intron Tl + chr3R 26811075 intron Tl + chr3R_8_26810001 chr3R_26810001 RAL-907 2202 chr3R 26885672 26885710 chr3R 26885792 26885830 6 109 6.0 5.5 5.8 0.9 158 chr3R 26885672 intron T48 + chr3R 26885751 intron T48 + chr3R 26885830 intron T48 + chr3R_6_26885001 chr3R_26885001 RAL-907 2203 chr3R 26908010 26908046 chr3R 26908127 26908156 5 110 7.0 4.5 5.8 0.7 146 chr3R 26908010 intron T48 + chr3R 26908083 intron T48 + chr3R 26908156 intron T48 + chr3R_5_26905001 chr3R_26905001 RAL-907 2204 chr3R 27007388 27007434 chr3R 27016543 27016548 roo 12 9148 3.5 3.0 3.2 2.9 9160 chr3R 27007388 intron RYa-R + chr3R 27011968 intron RYa-R + chr3R 27016548 intron RYa-R + chr3R_12_27010001 chr3R_27010001 RAL-907 2205 chr3R 27027668 27027720 chr3R 27027772 27027821 10 102 2.5 3.0 2.8 2.6 153 chr3R 27027668 intron RYa-R + chr3R 27027744 intron RYa-R + chr3R 27027821 intron RYa-R + chr3R_10_27025001 chr3R_27025001 RAL-907 2206 chr3R 27028708 27028756 chr3R 27028807 27028855 16 99 5.0 4.0 4.5 2.9 147 chr3R 27028708 intron RYa-R + chr3R 27028782 intron RYa-R + chr3R 27028855 intron RYa-R + chr3R_16_27025001 chr3R_27025001 RAL-907 2207 chr3R 27051652 27051681 chr3R 27051763 27051792 7 111 6.0 7.0 6.5 0.9 140 chr3R 27051652 intron RYa-R + chr3R 27051722 intron RYa-R + chr3R 27051792 intron RYa-R + chr3R_7_27050001 chr3R_27050001 RAL-907 2208 chr3R 27140501 27140544 chr3R 27148131 27148132 412 17 7623 3.0 11.0 7.0 2.1 7631 chr3R 27140501 intron CG6051 - chr3R 27144316 intron CG6051 - chr3R 27148132 intron CG6051 - chr3R_17_27140001 chr3R_27140001 RAL-907 2209 chr3R 27137229 27137281 chr3R 27149174 27149229 412 18 11946 29.5 29.0 29.2 0.6 12000 chr3R 27137229 intron CG6051 - chr3R 27143229 intron CG6051 - chr3R 27149229 intron CG6051 - chr3R_18_27140001 chr3R_27140001 RAL-907 2210 chr3R 27342772 27342825 chr3R 27351373 27351426 Tirant 8 8599 3.0 2.0 2.5 2.3 8654 chr3R 27342772 intron CG42534 + chr3R 27347099 intron CG42534 + chr3R 27351426 intron CG42534 + chr3R_8_27345001 chr3R_27345001 RAL-907 2211 chr3R 27353305 27353316 chr3R 27353410 27353421 4 102 4.5 1.0 2.8 1.1 116 chr3R 27353305 intron CG42534 + chr3R 27353363 intron CG42534 + chr3R 27353421 intron CG42534 + chr3R_4_27350001 chr3R_27350001 RAL-907 2212 chr3R 27420215 27420263 chr3R 27420407 27420450 10 188 6.0 6.5 6.2 1.4 235 chr3R 27420215 intron side - chr3R 27420332 intron side - chr3R 27420450 intron side - chr3R_10_27420001 chr3R_27420001 RAL-907 2213 chr3R 27468452 27468485 chr3R 27468876 27468921 8 432 6.5 8.5 7.5 0.9 469 chr3R 27468452 intergenic not near genes chr3R 27468686 intergenic not near genes chr3R 27468921 intergenic not near genes chr3R_8_27465001 chr3R_27465001 RAL-907 2214 chr3R 27492361 27492404 chr3R 27492466 27492502 7 104 0.5 1.0 0.8 3.9 141 chr3R 27492361 intergenic not near genes chr3R 27492432 intergenic not near genes chr3R 27492502 intergenic not near genes chr3R_7_27490001 chr3R_27490001 RAL-907 2215 chr3R 27496575 27496581 chr3R 27496700 27496706 4 125 6.0 3.5 4.8 0.7 131 chr3R 27496575 intergenic not near genes chr3R 27496640 intergenic not near genes chr3R 27496706 intergenic not near genes chr3R_4_27495001 chr3R_27495001 RAL-907 2216 chr3R 27496589 27496627 chr3R 27496698 27496742 11 121 0.5 3.5 2.0 3.7 153 chr3R 27496589 intergenic not near genes chr3R 27496666 intergenic not near genes chr3R 27496742 intergenic not near genes chr3R_11_27495001 chr3R_27495001 RAL-907 2217 chr3R 27521140 27521162 chr3R 27530369 27530391 roo 9 9229 9.5 6.0 7.8 1.0 9251 chr3R 27521140 intron CG12885 + chr3R 27525766 intron CG12885 + chr3R 27530391 intron CG12885 + chr3R_9_27525001 chr3R_27525001 RAL-907 2218 chr3R 27521164 27521183 chr3R 27530367 27530412 roo 10 9226 7.0 6.0 6.5 1.3 9248 chr3R 27521164 intron CG12885 + chr3R 27525788 intron CG12885 + chr3R 27530412 intron CG12885 + chr3R_10_27525001 chr3R_27525001 RAL-907 2219 chr3R 27595038 27595087 chr3R 27595141 27595190 4 103 13.0 15.0 14.0 0.3 152 chr3R 27595038 intron CG5639 - chr3R 27595114 intron CG5639 - chr3R 27595190 intron CG5639 - chr3R_4_27595001 chr3R_27595001 RAL-907 2220 chr3R 27622240 27622251 chr3R 27622333 27622366 5 109 6.0 3.0 4.5 0.9 126 chr3R 27622240 intron Tusp + chr3R 27622303 intron Tusp + chr3R 27622366 intron Tusp + chr3R_5_27620001 chr3R_27620001 RAL-907 2221 chr3R 27646210 27646230 chr3R 27646304 27646313 4 91 11.5 13.0 12.2 0.3 103 chr3R 27646210 exon tau - chr3R 27646262 intron tau - chr3R 27646313 intron tau - chr3R_4_27645001 chr3R_27645001 RAL-907 2222 chr3R 27725551 27725589 chr3R 27731013 27731051 I-element 5 5462 7.5 3.5 5.5 0.8 5500 chr3R 27725551 intergenic not near genes chr3R 27728301 intergenic not near genes chr3R 27731051 intergenic not near genes chr3R_5_27725001 chr3R_27725001 RAL-907 2223 chr3R 27735469 27735507 chr3R 27735698 27735735 4 229 3.5 12.5 8.0 0.4 266 chr3R 27735469 intergenic not near genes chr3R 27735602 intergenic not near genes chr3R 27735735 intergenic not near genes chr3R_4_27735001 chr3R_27735001 RAL-907 2224 chr3R 27799916 27799959 chr3R 27800018 27800061 11 102 1.5 3.0 2.2 3.4 145 chr3R 27799916 intron CG34353 - chr3R 27799988 intron CG34353 - chr3R 27800061 intron CG34353 - chr3R_11_27795001 chr3R_27795001 RAL-907 2225 chr3R 27829881 27829891 chr3R 27829980 27829989 4 99 8.5 3.0 5.8 0.6 108 chr3R 27829881 intron CG34353 - chr3R 27829935 intron CG34353 - chr3R 27829989 intron CG34353 - chr3R_4_27825001 chr3R_27825001 RAL-907 2226 chr3R 27856747 27856777 chr3R 27858249 27858280 hopper2 7 1503 10.0 3.5 6.8 0.9 1533 chr3R 27856747 intron CG34353 - chr3R 27857514 intron CG34353 - chr3R 27858280 intron CG34353 - chr3R_7_27855001 chr3R_27855001 RAL-907 2227 chr3R 27862937 27862973 chr3R 27868259 27868298 Transpac 4 5323 2.5 3.0 2.8 1.1 5361 chr3R 27862937 intron CG34353 - chr3R 27865618 intron CG34353 - chr3R 27868298 intron CG34353 - chr3R_4_27865001 chr3R_27865001 RAL-907 2228 chr3R 27870286 27870329 chr3R 27870389 27870432 4 94 8.5 6.0 7.2 0.5 146 chr3R 27870286 intron CG34353 - chr3R 27870359 intron CG34353 - chr3R 27870432 intron CG34353 - chr3R_4_27870001 chr3R_27870001 RAL-907 2229 chr3R 27875681 27875730 chr3R 27882756 27882805 297 17 7075 4.0 1.0 2.5 4.9 7124 chr3R 27875681 intron CG34353 - chr3R 27879243 intron CG34353 - chr3R 27882805 intron CG34353 - chr3R_17_27875001 chr3R_27875001 RAL-907 2230 chr3R 27911227 27911246 chr3R 27911325 27911344 8 98 3.5 4.5 4.0 1.6 117 chr3R 27911227 intergenic not near genes chr3R 27911286 intergenic not near genes chr3R 27911344 intergenic not near genes chr3R_8_27910001 chr3R_27910001 RAL-907 2231 chr3R 28054436 28054475 chr3R 28054532 28054570 8 92 5.5 6.0 5.8 1.2 134 chr3R 28054436 intron CG34362 + chr3R 28054503 intron CG34362 + chr3R 28054570 intron CG34362 + chr3R_8_28050001 chr3R_28050001 RAL-907 2232 chr3R 28068483 28068520 chr3R 28073934 28073982 I-element 7 5456 0.5 2.5 1.5 2.8 5499 chr3R 28068483 intron CG34362 + chr3R 28071232 intron CG34362 + chr3R 28073982 intron CG34362 + chr3R_7_28070001 chr3R_28070001 RAL-907 2233 chr3R 28173658 28173697 chr3R 28181108 28181141 mdg1 8 7448 2.5 6.0 4.2 1.5 7483 chr3R 28173658 intron CG34354 + chr3R 28177400 intron CG34354 + chr3R 28181141 intron CG34354 + chr3R_8_28175001 chr3R_28175001 RAL-907 2234 chr3R 28231011 28231051 chr3R 28231102 28231144 6 92 1.0 6.5 3.8 1.2 133 chr3R 28231011 intron CG34354 + chr3R 28231078 intron CG34354 + chr3R 28231144 intron CG34354 + chr3R_6_28230001 chr3R_28230001 RAL-907 2235 chr3R 28253340 28253362 chr3R 28255848 28255861 jockey 7 2512 1.5 3.5 2.5 2.0 2521 chr3R 28253340 intergenic not near genes chr3R 28254600 intergenic not near genes chr3R 28255861 intergenic not near genes chr3R_7_28250001 chr3R_28250001 RAL-907 2236 chr3R 28255968 28255986 chr3R 28256375 28256417 9 419 7.5 4.0 5.8 1.3 449 chr3R 28255968 intergenic not near genes chr3R 28256192 intergenic not near genes chr3R 28256417 intergenic not near genes chr3R_9_28255001 chr3R_28255001 RAL-907 2237 chr3R 28302085 28302131 chr3R 28302547 28302590 jockey 10 460 4.5 6.0 5.2 1.6 505 chr3R 28302085 intergenic not near genes chr3R 28302338 intergenic not near genes chr3R 28302590 intergenic not near genes chr3R_10_28300001 chr3R_28300001 RAL-907 2238 chr3R 28331491 28331526 chr3R 28331590 28331625 15 99 5.5 4.0 4.8 2.6 134 chr3R 28331491 intron larp - chr3R 28331558 intron larp - chr3R 28331625 intron larp - chr3R_15_28330001 chr3R_28330001 RAL-907 2239 chr3R 28345632 28345666 chr3R 28345724 28345762 5 95 4.5 1.5 3.0 1.2 130 chr3R 28345632 intergenic Moca-cyp + chr3R 28345697 intergenic not near genes chr3R 28345762 intergenic not near genes chr3R_5_28345001 chr3R_28345001 RAL-907 2240 chr3R 28368977 28369005 chr3R 28369081 28369105 5 103 6.0 10.5 8.2 0.5 128 chr3R 28368977 intergenic not near genes chr3R 28369041 intergenic not near genes chr3R 28369105 intergenic not near genes chr3R_5_28365001 chr3R_28365001 RAL-907 2241 chr3R 28393682 28393731 chr3R 28393802 28393831 11 117 7.5 7.0 7.2 1.3 149 chr3R 28393682 intergenic not near genes chr3R 28393756 intergenic not near genes chr3R 28393831 intergenic not near genes chr3R_11_28390001 chr3R_28390001 RAL-907 2242 chr3R 28478975 28479162 chr3R 28479091 28479265 10 111 8.5 8.0 8.2 1.1 290 chr3R 28478975 intergenic not near genes chr3R 28479120 intergenic not near genes chr3R 28479265 intergenic not near genes chr3R_10_28475001 chr3R_28475001 RAL-907 2243 chr3R 28484353 28484394 chr3R 28486250 28486291 23 1902 47.5 51.0 49.2 0.5 1938 chr3R 28484353 intergenic CG1894 + chr3R 28485322 exon CG1894 + chr3R 28486291 intergenic CG1894 + chr3R_23_28485001 chr3R_28485001 RAL-907 2244 chr3R 28594119 28594131 chr3R 28594195 28594230 4 87 13.0 17.5 15.2 0.2 111 chr3R 28594119 5` UTR CR43440 + chr3R 28594174 5` UTR CR43440 + chr3R 28594230 5` UTR CR43440 + chr3R_4_28590001 chr3R_28590001 RAL-907 2245 chr3R 28702910 28702960 chr3R 28703012 28703064 9 102 2.0 5.0 3.5 2.0 154 chr3R 28702910 intron htt + chr3R 28702987 intron htt + chr3R 28703064 intron htt + chr3R_9_28700001 chr3R_28700001 RAL-907 2246 chr3R 28758304 28758319 chr3R 28771331 28771346 Stalker4 5 13027 4.5 6.0 5.2 0.8 13042 chr3R 28758304 intergenic aqrs - chr3R 28764825 intergenic not near genes chr3R 28771346 intergenic not near genes chr3R_5_28760001 chr3R_28760001 RAL-907 2247 chr3R 28763901 28763918 chr3R 28771364 28771381 Stalker4 8 7463 0.0 10.5 5.2 1.3 7480 chr3R 28763901 intergenic not near genes chr3R 28767641 intergenic not near genes chr3R 28771381 intergenic not near genes chr3R_8_28765001 chr3R_28765001 RAL-907 2248 chr3R 28811555 28811603 chr3R 28811721 28811769 13 165 2.0 3.5 2.8 3.4 214 chr3R 28811555 intergenic wdn - chr3R 28811662 intergenic wdn -,CG1646 + chr3R 28811769 intergenic CG1646 +,wdn - chr3R_13_28810001 chr3R_28810001 RAL-907 2249 chr3R 28830869 28830918 chr3R 28830966 28831016 7 91 7.0 3.5 5.2 1.1 147 chr3R 28830869 intron WASp - chr3R 28830942 intron WASp - chr3R 28831016 intron WASp - chr3R_7_28830001 chr3R_28830001 RAL-907 2250 chr3R 21907534 21907536 chr3R 28831801 28831802 11 6924267 15.5 15.5 15.5 0.7 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_11_25365001 chr3R_25365001 RAL-907 2251 chr3R 28950233 28950274 chr3R 28950334 28950378 7 101 7.0 3.0 5.0 1.2 145 chr3R 28950233 intron CG14521 - chr3R 28950306 intron CG14521 - chr3R 28950378 intron CG14521 - chr3R_7_28950001 chr3R_28950001 RAL-907 2252 chr3R 28971145 28971187 chr3R 28971246 28971288 7 101 16.5 17.0 16.8 0.4 143 chr3R 28971145 5` UTR CR45669 + chr3R 28971216 5` UTR CR45669 + chr3R 28971288 5` UTR CR45669 + chr3R_7_28970001 chr3R_28970001 RAL-907 2253 chr3R 28985027 28985082 chr3R 28985129 28985206 6 112 0.0 0.5 0.2 5.0 179 chr3R 28985027 intergenic not near genes chr3R 28985116 intergenic not near genes chr3R 28985206 intergenic not near genes chr3R_6_28985001 chr3R_28985001 RAL-907 2254 chr3R 28989012 28989016 chr3R 28989111 28989112 4 98 6.5 11.5 9.0 0.4 100 chr3R 28989012 intergenic not near genes chr3R 28989062 intergenic not near genes chr3R 28989112 intergenic not near genes chr3R_4_28985001 chr3R_28985001 RAL-907 2255 chr3R 29009939 29009950 chr3R 29010065 29010076 7 126 16.5 10.5 13.5 0.5 137 chr3R 29009939 intron wat - chr3R 29010008 intron wat - chr3R 29010076 intron wat - chr3R_7_29010001 chr3R_29010001 RAL-907 2256 chr3R 29009951 29009983 chr3R 29010062 29010109 10 120 14.0 10.0 12.0 0.8 158 chr3R 29009951 intron wat - chr3R 29010030 intron wat - chr3R 29010109 intron wat - chr3R_10_29010001 chr3R_29010001 RAL-907 2257 chr3R 29032730 29032775 chr3R 29032827 29032857 11 93 3.0 3.5 3.2 2.6 127 chr3R 29032730 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032794 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032857 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_11_29030001 chr3R_29030001 RAL-907 2258 chr3R 29070044 29070078 chr3R 29070145 29070179 7 101 24.0 21.5 22.8 0.3 135 chr3R 29070044 intron CG11873 + chr3R 29070112 intron CG11873 + chr3R 29070179 intron CG11873 + chr3R_7_29070001 chr3R_29070001 RAL-907 2259 chr3R 29079388 29079397 chr3R 29080780 29080786 NOF 4 1391 3.0 7.5 5.2 0.6 1398 chr3R 29079388 intron CG11873 + chr3R 29080087 intron CG11873 + chr3R 29080786 intron CG11873 + chr3R_4_29080001 chr3R_29080001 RAL-907 2260 chr3R 29176115 29176123 chr3R 29176224 29176232 5 109 14.0 7.5 10.8 0.4 117 chr3R 29176115 intron CG14509 - chr3R 29176174 intron CG14509 - chr3R 29176232 intron CG14509 - chr3R_5_29175001 chr3R_29175001 RAL-907 2261 chr3R 29203832 29203854 chr3R 29203932 29203948 7 99 6.0 4.5 5.2 1.1 116 chr3R 29203832 5` UTR CG14508 - chr3R 29203890 intron CG14508 - chr3R 29203948 intron CG14508 - chr3R_7_29200001 chr3R_29200001 RAL-907 2262 chr3R 29213045 29213089 chr3R 29213148 29213192 25 99 4.5 7.0 5.8 3.7 147 chr3R 29213045 intergenic not near genes chr3R 29213118 intergenic not near genes chr3R 29213192 intergenic not near genes chr3R_25_29210001 chr3R_29210001 RAL-907 2263 chr3R 29237261 29237284 chr3R 29239279 29239285 7 2022 15.0 7.5 11.2 0.6 2024 chr3R 29237261 exon CG11951 - chr3R 29238273 intron CG11951 - chr3R 29239285 exon CG31427 - chr3R_7_29235001 chr3R_29235001 RAL-907 2264 chr3R 29240454 29240504 chr3R 29240555 29240608 18 104 1.5 4.0 2.8 4.7 154 chr3R 29240454 intergenic CG31427 -,CG31445 - chr3R 29240531 intergenic CG31445 -,CG31427 - chr3R 29240608 3` UTR CG31445 - chr3R_18_29240001 chr3R_29240001 RAL-907 2265 chr3R 29256252 29256300 chr3R 29256352 29256375 11 96 4.0 5.5 4.8 1.9 123 chr3R 29256252 intergenic CG45544 +,stg - chr3R 29256314 intergenic CG45544 + chr3R 29256375 intergenic CG45544 + chr3R_11_29255001 chr3R_29255001 RAL-907 2266 chr3R 29264184 29264213 chr3R 29264306 29264335 4 122 13.0 16.0 14.5 0.3 151 chr3R 29264184 intergenic not near genes chr3R 29264260 intergenic not near genes chr3R 29264335 intergenic not near genes chr3R_4_29260001 chr3R_29260001 RAL-907 2267 chr3R 29376350 29376363 chr3R 29376458 29376471 5 107 9.0 6.5 7.8 0.6 121 chr3R 29376350 intergenic not near genes chr3R 29376410 intergenic not near genes chr3R 29376471 intergenic not near genes chr3R_5_29375001 chr3R_29375001 RAL-907 2268 chr3R 29406618 29406639 chr3R 29407903 29407929 jockey 5 1299 4.0 4.0 4.0 1.0 1311 chr3R 29406618 intron Ptp99A + chr3R 29407274 intron Ptp99A + chr3R 29407929 intron Ptp99A + chr3R_5_29405001 chr3R_29405001 RAL-907 2269 chr3R 29471999 29472029 chr3R 29472107 29472132 6 105 5.5 3.5 4.5 1.1 133 chr3R 29471999 intron Ptp99A + chr3R 29472066 intron Ptp99A + chr3R 29472132 intron Ptp99A + chr3R_6_29470001 chr3R_29470001 RAL-907 2270 chr3R 29508813 29508840 chr3R 29508974 29509050 4 198 0.0 0.0 0.0 4.0 237 chr3R 29508813 intergenic not near genes chr3R 29508932 intergenic not near genes chr3R 29509050 intergenic not near genes chr3R_4_29505001 chr3R_29505001 RAL-907 2271 chr3R 29538459 29538491 chr3R 29538561 29538598 5 108 10.5 14.0 12.2 0.4 139 chr3R 29538459 intergenic not near genes chr3R 29538528 intergenic not near genes chr3R 29538598 intergenic not near genes chr3R_5_29535001 chr3R_29535001 RAL-907 2272 chr3R 29566363 29566412 chr3R 29566460 29566509 10 96 6.0 5.5 5.8 1.5 146 chr3R 29566363 intergenic not near genes chr3R 29566436 intergenic not near genes chr3R 29566509 intergenic not near genes chr3R_10_29565001 chr3R_29565001 RAL-907 2273 chr3R 29576749 29577006 chr3R 29576869 29577097 10 107 9.5 0.0 4.8 1.7 348 chr3R 29576749 intergenic not near genes chr3R 29576923 intergenic not near genes chr3R 29577097 intergenic not near genes chr3R_10_29575001 chr3R_29575001 RAL-907 2274 chr3R 29645812 29645839 chr3R 29645913 29645930 5 97 8.0 7.0 7.5 0.6 118 chr3R 29645812 intron Dop1R2 - chr3R 29645871 intron Dop1R2 - chr3R 29645930 intron Dop1R2 - chr3R_5_29645001 chr3R_29645001 RAL-907 2275 chr3R 29655651 29655665 chr3R 29655750 29655764 5 99 5.0 3.0 4.0 1.0 113 chr3R 29655651 intron Dop1R2 - chr3R 29655708 intron Dop1R2 - chr3R 29655764 intron Dop1R2 - chr3R_5_29655001 chr3R_29655001 RAL-907 2276 chr3R 29718149 29718165 chr3R 29718306 29718318 5 156 13.5 7.5 10.5 0.4 169 chr3R 29718149 intergenic not near genes chr3R 29718234 intergenic CG15506 + chr3R 29718318 intergenic CG15506 + chr3R_5_29715001 chr3R_29715001 RAL-907 2277 chr3R 29719434 29719486 chr3R 29719554 29719606 4 120 10.5 15.5 13.0 0.3 172 chr3R 29719434 intron CG15506 + chr3R 29719520 intron CG15506 + chr3R 29719606 intron CG15506 + chr3R_4_29715001 chr3R_29715001 RAL-907 2278 chr3R 29738246 29738295 chr3R 29739733 29739746 hobo 8 1482 2.5 1.0 1.8 2.9 1500 chr3R 29738246 intergenic CG1969 +,CG7598 + chr3R 29738996 intron CG1969 + chr3R 29739746 5` UTR CG1969 + chr3R_8_29735001 chr3R_29735001 RAL-907 2279 chr3R 29760340 29760390 chr3R 29761561 29761606 pogo 5 1219 12.5 11.0 11.8 0.4 1266 chr3R 29760340 intergenic not near genes chr3R 29760973 intergenic not near genes chr3R 29761606 intergenic not near genes chr3R_5_29760001 chr3R_29760001 RAL-907 2280 chr3R 29831790 29831839 chr3R 29831895 29831939 8 96 7.5 4.0 5.8 1.2 149 chr3R 29831790 exon Atg16 - chr3R 29831864 intron Atg16 - chr3R 29831939 exon Atg16 - chr3R_8_29830001 chr3R_29830001 RAL-907 2281 chr3R 29881005 29881031 chr3R 29881111 29881137 9 106 3.0 5.5 4.2 1.7 132 chr3R 29881005 intron CG31038 + chr3R 29881071 intron CG31038 + chr3R 29881137 intron CG31038 + chr3R_9_29880001 chr3R_29880001 RAL-907 2282 chr3R 29882014 29882052 chr3R 29891180 29891229 roo 12 9171 3.0 2.0 2.5 3.4 9215 chr3R 29882014 intron CG31038 + chr3R 29886622 intron CG31038 + chr3R 29891229 intron CG31038 + chr3R_12_29885001 chr3R_29885001 RAL-907 2283 chr3R 29950569 29950592 chr3R 29950651 29950676 5 76 2.5 3.5 3.0 1.2 107 chr3R 29950569 intergenic TkR99D - chr3R 29950622 intergenic TkR99D - chr3R 29950676 intergenic TkR99D - chr3R_5_29950001 chr3R_29950001 RAL-907 2284 chr3R 29978745 29978773 chr3R 29978836 29978880 4 101 1.5 3.5 2.5 1.1 135 chr3R 29978745 intergenic not near genes chr3R 29978812 intergenic not near genes chr3R 29978880 intergenic not near genes chr3R_4_29975001 chr3R_29975001 RAL-907 2285 chr3R 30013362 30013402 chr3R 30013480 30013513 6 116 7.0 3.0 5.0 1.0 151 chr3R 30013362 intron CG7920 - chr3R 30013438 intron CG7920 - chr3R 30013513 intron CG7920 - chr3R_6_30010001 chr3R_30010001 RAL-907 2286 chr3R 30084849 30084873 chr3R 30086316 30086340 hobo 9 1475 2.5 0.5 1.5 3.6 1491 chr3R 30084849 intron sima + chr3R 30085594 intron sima + chr3R 30086340 intron sima + chr3R_9_30085001 chr3R_30085001 RAL-907 2287 chr3R 30183197 30183235 chr3R 30183326 30183364 13 127 5.0 7.0 6.0 1.9 167 chr3R 30183197 intergenic not near genes chr3R 30183280 intergenic not near genes chr3R 30183364 intergenic CR44262 - chr3R_13_30180001 chr3R_30180001 RAL-907 2288 chr3R 30224631 30224673 chr3R 30224729 30224771 17 97 1.5 1.5 1.5 6.8 140 chr3R 30224631 intergenic not near genes chr3R 30224701 intergenic not near genes chr3R 30224771 intergenic not near genes chr3R_17_30220001 chr3R_30220001 RAL-907 2289 chr3R 30238742 30238788 chr3R 30239925 30239972 1360 17 1182 4.0 1.5 2.8 4.5 1230 chr3R 30238742 intergenic not near genes chr3R 30239357 intergenic not near genes chr3R 30239972 intergenic not near genes chr3R_17_30235001 chr3R_30235001 RAL-907 2290 chr3R 30259495 30259543 chr3R 30260568 30260597 11 1067 19.5 15.0 17.2 0.6 1102 chr3R 30259495 intergenic not near genes chr3R 30260046 intergenic not near genes chr3R 30260597 intergenic not near genes chr3R_11_30260001 chr3R_30260001 RAL-907 2291 chr3R 30260366 30260397 chr3R 30260462 30260493 5 96 6.0 8.5 7.2 0.6 127 chr3R 30260366 intergenic not near genes chr3R 30260430 intergenic not near genes chr3R 30260493 intergenic not near genes chr3R_5_30260001 chr3R_30260001 RAL-907 2292 chr3R 30259317 30259325 chr3R 30261002 30261020 4 1688 18.0 14.0 16.0 0.2 1703 chr3R 30259317 intergenic not near genes chr3R 30260168 intergenic not near genes chr3R 30261020 intergenic not near genes chr3R_4_30260001 chr3R_30260001 RAL-907 2293 chr3R 30264454 30264489 chr3R 30264660 30264694 7 203 5.0 4.0 4.5 1.3 240 chr3R 30264454 intergenic not near genes chr3R 30264574 intergenic not near genes chr3R 30264694 intergenic not near genes chr3R_7_30260001 chr3R_30260001 RAL-907 2294 chr3R 30268252 30268446 chr3R 30268338 30268531 4 90 1.5 3.5 2.5 1.1 279 chr3R 30268252 intergenic not near genes chr3R 30268392 intergenic not near genes chr3R 30268531 intergenic not near genes chr3R_4_30265001 chr3R_30265001 RAL-907 2295 chr3R 30273577 30273594 chr3R 30273690 30273707 7 113 11.0 10.0 10.5 0.6 130 chr3R 30273577 intergenic not near genes chr3R 30273642 intergenic not near genes chr3R 30273707 intergenic not near genes chr3R_7_30270001 chr3R_30270001 RAL-907 2296 chr3R 30273601 30273624 chr3R 30273686 30273737 14 104 8.0 9.5 8.8 1.4 136 chr3R 30273601 intergenic not near genes chr3R 30273669 intergenic not near genes chr3R 30273737 intergenic not near genes chr3R_14_30270001 chr3R_30270001 RAL-907 2297 chr3R 30307126 30307137 chr3R 30307204 30307238 5 90 4.0 7.5 5.8 0.7 112 chr3R 30307126 intron hdc + chr3R 30307182 intron hdc + chr3R 30307238 intron hdc + chr3R_5_30305001 chr3R_30305001 RAL-907 2298 chr3R 30375526 30375570 chr3R 30383169 30383213 412 14 7642 3.0 3.0 3.0 3.5 7687 chr3R 30375526 intergenic not near genes chr3R 30379370 intergenic not near genes chr3R 30383213 intergenic not near genes chr3R_14_30375001 chr3R_30375001 RAL-907 2299 chr3R 30396196 30396229 chr3R 30404482 30404514 roo 8 8286 4.5 1.5 3.0 2.0 8318 chr3R 30396196 intergenic not near genes chr3R 30400355 intergenic not near genes chr3R 30404514 5` UTR CR45570 + chr3R_8_30400001 chr3R_30400001 RAL-907 2300 chr3R 30412585 30412629 chr3R 30412987 30413038 11 408 3.0 7.5 5.2 1.8 453 chr3R 30412585 intergenic not near genes chr3R 30412812 intergenic not near genes chr3R 30413038 intergenic not near genes chr3R_11_30410001 chr3R_30410001 RAL-907 2301 chr3R 30456371 30456424 chr3R 30456471 30456523 17 94 2.0 5.0 3.5 3.8 152 chr3R 30456371 intergenic CG2224 - chr3R 30456447 3` UTR CG2224 - chr3R 30456523 3` UTR CG2224 - chr3R_17_30455001 chr3R_30455001 RAL-907 2302 chr3R 30458000 30458046 chr3R 30458100 30458139 9 99 9.5 8.5 9.0 0.9 139 chr3R 30458000 intron CG2224 - chr3R 30458070 intron CG2224 - chr3R 30458139 intron CG2224 - chr3R_9_30455001 chr3R_30455001 RAL-907 2303 chr3R 30480486 30480510 chr3R 30482953 30482997 jockey 7 2482 1.0 4.0 2.5 2.0 2511 chr3R 30480486 intron PH4alphaEFB + chr3R 30481742 intron PH4alphaEFB + chr3R 30482997 intron PH4alphaEFB + chr3R_7_30480001 chr3R_30480001 RAL-907 2304 chr3R 30485029 30485069 chr3R 30485120 30485165 7 95 5.5 7.5 6.5 0.9 136 chr3R 30485029 intron PH4alphaEFB + chr3R 30485097 intron PH4alphaEFB + chr3R 30485165 intron PH4alphaEFB + chr3R_7_30485001 chr3R_30485001 RAL-907 2305 chr3R 30537673 30537713 chr3R 30537773 30537798 5 97 6.5 6.5 6.5 0.7 125 chr3R 30537673 intron tmod + chr3R 30537736 intron tmod + chr3R 30537798 intron tmod + chr3R_5_30535001 chr3R_30535001 RAL-907 2306 chr3R 30539728 30539746 chr3R 30540368 30540411 4 656 5.0 6.5 5.8 0.6 683 chr3R 30539728 intron tmod + chr3R 30540070 intron tmod + chr3R 30540411 intron tmod + chr3R_4_30540001 chr3R_30540001 RAL-907 2307 chr3R 30545675 30545719 chr3R 30545803 30545842 12 124 2.0 4.0 3.0 3.0 167 chr3R 30545675 intron tmod + chr3R 30545758 intron tmod + chr3R 30545842 intron tmod + chr3R_12_30545001 chr3R_30545001 RAL-907 2308 chr3R 30548994 30549038 chr3R 30549104 30549150 15 108 3.5 3.0 3.2 3.6 156 chr3R 30548994 intron tmod + chr3R 30549072 intron tmod + chr3R 30549150 intron tmod + chr3R_15_30545001 chr3R_30545001 RAL-907 2309 chr3R 30571683 30571722 chr3R 30571783 30571821 18 100 0.0 0.5 0.2 15.0 138 chr3R 30571683 intron tmod + chr3R 30571752 intron tmod + chr3R 30571821 exon tmod + chr3R_18_30570001 chr3R_30570001 RAL-907 2310 chr3R 30627608 30627631 chr3R 30627683 30627722 6 84 4.0 1.0 2.5 1.7 114 chr3R 30627608 exon CG2267 - chr3R 30627665 exon CG2267 - chr3R 30627722 exon CG2267 - chr3R_6_30625001 chr3R_30625001 RAL-907 2311 chr3R 30649848 30649879 chr3R 30649949 30649961 7 97 8.5 7.5 8.0 0.8 113 chr3R 30649848 3` UTR CG34432 + chr3R 30649904 intergenic CG34432 +,CG34433 + chr3R 30649961 5` UTR CG34433 + chr3R_7_30645001 chr3R_30645001 RAL-907 2312 chr3R 30650788 30650808 chr3R 30650905 30650925 5 117 0.5 2.0 1.2 2.3 137 chr3R 30650788 3` UTR CG34433 + chr3R 30650856 3` UTR CG34433 + chr3R 30650925 intergenic CG34433 + chr3R_5_30650001 chr3R_30650001 RAL-907 2313 chr3R 30679507 30679548 chr3R 30686988 30687022 blood 7 7486 3.0 2.0 2.5 2.0 7515 chr3R 30679507 intergenic not near genes chr3R 30683264 intergenic not near genes chr3R 30687022 intergenic not near genes chr3R_7_30680001 chr3R_30680001 RAL-907 2314 chr3R 30808247 30808277 chr3R 30808411 30808441 5 164 24.0 15.5 19.8 0.2 194 chr3R 30808247 intergenic dj-1beta +,cindr + chr3R 30808344 intergenic cindr +,dj-1beta + chr3R 30808441 intergenic cindr +,dj-1beta + chr3R_5_30805001 chr3R_30805001 RAL-907 2315 chr3R 30862424 30862451 chr3R 30862546 30862579 6 126 5.0 8.0 6.5 0.8 155 chr3R 30862424 intergenic not near genes chr3R 30862502 intergenic not near genes chr3R 30862579 intergenic not near genes chr3R_6_30860001 chr3R_30860001 RAL-907 2316 chr3R 30964612 30964634 chr3R 30964685 30964692 4 74 10.5 8.0 9.2 0.4 80 chr3R 30964612 intergenic Ctr1C - chr3R 30964652 intergenic Ctr1C - chr3R 30964692 intergenic Ctr1C - chr3R_4_30960001 chr3R_30960001 RAL-907 2317 chr3R 31068834 31068843 chr3R 31069011 31069051 6 202 20.5 15.0 17.8 0.3 217 chr3R 31068834 intron Sox100B + chr3R 31068942 intron Sox100B + chr3R 31069051 intron Sox100B + chr3R_6_31065001 chr3R_31065001 RAL-907 2318 chr3R 31069631 31069674 chr3R 31069746 31069789 8 115 12.0 10.5 11.2 0.7 158 chr3R 31069631 intron Sox100B + chr3R 31069710 intron Sox100B + chr3R 31069789 intron Sox100B + chr3R_8_31065001 chr3R_31065001 RAL-907 2319 chr3R 31074217 31074258 chr3R 31081830 31081876 springer 15 7616 5.0 2.5 3.8 3.1 7659 chr3R 31074217 intron Sox100B + chr3R 31078046 intron Sox100B + chr3R 31081876 intron Sox100B + chr3R_15_31075001 chr3R_31075001 RAL-907 2320 chr3R 31084896 31084933 chr3R 31084992 31085029 6 96 3.0 3.5 3.2 1.4 133 chr3R 31084896 intergenic not near genes chr3R 31084962 intergenic not near genes chr3R 31085029 intergenic not near genes chr3R_6_31080001 chr3R_31080001 RAL-907 2321 chr3R 31121762 31121809 chr3R 31121874 31121921 5 106 5.5 4.0 4.8 0.9 159 chr3R 31121762 intergenic not near genes chr3R 31121842 intergenic not near genes chr3R 31121921 intergenic not near genes chr3R_5_31120001 chr3R_31120001 RAL-907 2322 chr3R 31137140 31137186 chr3R 31137235 31137286 7 99 3.0 3.0 3.0 1.8 146 chr3R 31137140 intron Gycbeta100B + chr3R 31137213 intron Gycbeta100B + chr3R 31137286 intron Gycbeta100B + chr3R_7_31135001 chr3R_31135001 RAL-907 2323 chr3R 31139465 31139511 chr3R 31139567 31139616 4 104 12.5 12.5 12.5 0.3 151 chr3R 31139465 intron Gycbeta100B + chr3R 31139540 intron Gycbeta100B + chr3R 31139616 intron Gycbeta100B + chr3R_4_31135001 chr3R_31135001 RAL-907 2324 chr3R 31279373 31279404 chr3R 31285584 31285603 diver 4 6206 1.5 2.0 1.8 1.4 6230 chr3R 31279373 intergenic not near genes chr3R 31282488 intergenic not near genes chr3R 31285603 intergenic not near genes chr3R_4_31280001 chr3R_31280001 RAL-907 2325 chr3R 31295338 31295374 chr3R 31295444 31295475 7 104 5.5 6.0 5.8 1.0 137 chr3R 31295338 intergenic not near genes chr3R 31295406 intergenic not near genes chr3R 31295475 intergenic not near genes chr3R_7_31295001 chr3R_31295001 RAL-907 2326 chr3R 31328154 31328176 chr3R 31328351 31328370 6 201 4.0 4.0 4.0 1.2 216 chr3R 31328154 intron CG34347 + chr3R 31328262 intron CG34347 + chr3R 31328370 intron CG34347 + chr3R_6_31325001 chr3R_31325001 RAL-907 2327 chr3R 31486143 31486169 chr3R 31486244 31486247 7 98 6.0 6.5 6.2 1.0 104 chr3R 31486143 intergenic not near genes chr3R 31486195 intergenic not near genes chr3R 31486247 intergenic not near genes chr3R_7_31485001 chr3R_31485001 RAL-907 2328 chr3R 31610095 31610134 chr3R 31610201 31610231 7 105 1.0 4.5 2.8 1.8 136 chr3R 31610095 intron CycG - chr3R 31610163 intron CycG - chr3R 31610231 intron CycG - chr3R_7_31610001 chr3R_31610001 RAL-907 2329 chr3R 31691536 31691561 chr3R 31696297 31696336 Doc 13 4774 2.5 5.5 4.0 2.6 4800 chr3R 31691536 intergenic not near genes chr3R 31693936 intergenic not near genes chr3R 31696336 intergenic not near genes chr3R_13_31690001 chr3R_31690001 RAL-907 2330 chr3R 31774857 31774894 chr3R 31775017 31775049 12 158 8.5 7.5 8.0 1.3 192 chr3R 31774857 3` UTR sip3 + chr3R 31774953 3` UTR sip3 + chr3R 31775049 3` UTR,3` UTR sip3 +,CG2126 - chr3R_12_31770001 chr3R_31770001 RAL-907 2331 chr3R 31858142 31858174 chr3R 31858226 31858271 5 93 9.0 9.0 9.0 0.5 129 chr3R 31858142 intron heph - chr3R 31858206 intron heph - chr3R 31858271 intron heph - chr3R_5_31855001 chr3R_31855001 RAL-907 2332 chr3R 31858732 31858776 chr3R 31858836 31858882 4 102 1.5 0.5 1.0 2.0 150 chr3R 31858732 intron heph - chr3R 31858807 intron heph - chr3R 31858882 intron heph - chr3R_4_31855001 chr3R_31855001 RAL-907 2333 chr3R 31874844 31874879 chr3R 31874925 31874975 6 84 6.5 6.0 6.2 0.8 131 chr3R 31874844 intron heph - chr3R 31874910 intron heph - chr3R 31874975 intron heph - chr3R_6_31870001 chr3R_31870001 RAL-907 2334 chr3R 31931178 31931199 chr3R 31931281 31931302 5 103 14.0 19.5 16.8 0.3 124 chr3R 31931178 intron heph - chr3R 31931240 intron heph - chr3R 31931302 intron heph - chr3R_5_31930001 chr3R_31930001 RAL-907 2335 chr3R 31997978 31998020 chr3R 32005468 32005510 blood 7 7489 3.0 5.5 4.2 1.3 7532 chr3R 31997978 intron heph - chr3R 32001744 intron heph - chr3R 32005510 intron heph - chr3R_7_32000001 chr3R_32000001 RAL-907 2336 chr3R 32040715 32040751 chr3R 32040893 32040929 5 178 12.0 12.5 12.2 0.4 214 chr3R 32040715 intergenic not near genes chr3R 32040822 intergenic not near genes chr3R 32040929 intergenic not near genes chr3R_5_32040001 chr3R_32040001 RAL-907 2337 chr4 264959 265000 chr4 265182 265218 8 222 3.0 4.0 3.5 1.8 259 chr4 264959 3` UTR RhoGAP102A + chr4 265088 3` UTR RhoGAP102A + chr4 265218 3` UTR RhoGAP102A + chr4_8_265001 chr4_265001 RAL-907 2338 chr4 319974 320020 chr4 328170 328196 Stalker2 23 8195 5.5 7.0 6.2 3.2 8222 chr4 319974 3` UTR CG32850 + chr4 324085 intron CG32850 + chr4 328196 3` UTR,3` UTR CG32850 +,PMCA - chr4_23_320001 chr4_320001 RAL-907 2339 chr4 409202 409245 chr4 409305 409348 8 102 2.0 0.0 1.0 4.0 146 chr4 409202 intergenic not near genes chr4 409275 intergenic not near genes chr4 409348 intergenic not near genes chr4_8_405001 chr4_405001 RAL-907 2340 chr4 671584 671633 chr4 680187 680191 Tirant 7 8590 3.0 4.0 3.5 1.6 8607 chr4 671584 intron CG11360 + chr4 675888 intron CG11360 + chr4 680191 intron CG11360 + chr4_7_675001 chr4_675001 RAL-907 2341 chr4 700602 700617 chr4 700899 700914 5 297 4.5 0.5 2.5 1.4 312 chr4 700602 intron ey + chr4 700758 intron ey + chr4 700914 intron ey + chr4_5_700001 chr4_700001 RAL-907 2342 chr4 852880 852927 chr4 853263 853271 13 378 6.0 2.0 4.0 2.6 391 chr4 852880 intergenic not near genes chr4 853076 intergenic not near genes chr4 853271 intergenic CG11148 - chr4_13_850001 chr4_850001 RAL-907 2343 chrX 318456 318497 chrX 323562 323603 flea 9 5105 5.0 5.0 5.0 1.5 5147 chrX 318456 intron,intron CG3777 +,CG32816 - chrX 321030 intron,intron CG3777 +,CG32816 - chrX 323603 intron,intron CG3777 +,CG32816 - chrX_9_320001 chrX_320001 RAL-907 2344 chrX 428404 428451 chrX 434604 434656 3S18 10 6203 3.0 5.5 4.2 1.9 6252 chrX 428404 intron CG32816 - chrX 431530 intron CG32816 - chrX 434656 intron CG32816 - chrX_10_430001 chrX_430001 RAL-907 2345 chrX 440976 441018 chrX 441074 441116 9 98 3.0 0.0 1.5 3.6 140 chrX 440976 intron CG32816 - chrX 441046 intron CG32816 - chrX 441116 intron CG32816 - chrX_9_440001 chrX_440001 RAL-907 2346 chrX 450345 450390 chrX 450443 450488 13 98 2.5 3.0 2.8 3.4 143 chrX 450345 intron CG32816 - chrX 450416 intron CG32816 - chrX 450488 intron CG32816 - chrX_13_450001 chrX_450001 RAL-907 2347 chrX 494600 494636 chrX 494689 494718 8 103 1.5 4.0 2.8 2.1 118 chrX 494600 intergenic CG17778 + chrX 494659 5` UTR CG17778 + chrX 494718 intron CG17778 + chrX_8_490001 chrX_490001 RAL-907 2348 chrX 547621 547658 chrX 547885 547922 12 264 3.0 4.0 3.5 2.7 301 chrX 547621 intron Appl + chrX 547772 intron Appl + chrX 547922 intron Appl + chrX_12_545001 chrX_545001 RAL-907 2349 chrX 667627 667680 chrX 667731 667784 16 104 3.5 2.0 2.8 4.2 157 chrX 667627 intergenic not near genes chrX 667706 intergenic not near genes chrX 667784 intergenic not near genes chrX_16_665001 chrX_665001 RAL-907 2350 chrX 670262 670293 chrX 670362 670380 6 95 0.5 2.5 1.5 2.4 118 chrX 670262 intergenic not near genes chrX 670321 intergenic not near genes chrX 670380 intergenic not near genes chrX_6_670001 chrX_670001 RAL-907 2351 chrX 706808 706825 chrX 707177 707184 4 372 0.5 3.5 2.0 1.3 376 chrX 706808 intron sdk + chrX 706996 intron sdk + chrX 707184 intron sdk + chrX_4_705001 chrX_705001 RAL-907 2352 chrX 718325 718357 chrX 718424 718457 8 100 0.5 0.5 0.5 5.3 132 chrX 718325 intron sdk + chrX 718391 intron sdk + chrX 718457 intron sdk + chrX_8_715001 chrX_715001 RAL-907 2353 chrX 771787 771838 chrX 771898 771923 14 101 2.5 4.0 3.2 3.3 136 chrX 771787 intron fz3 + chrX 771855 intron fz3 + chrX 771923 intron fz3 + chrX_14_770001 chrX_770001 RAL-907 2354 chrX 812250 812298 chrX 817901 817949 297 14 5650 6.5 4.5 5.5 2.2 5699 chrX 812250 intron CG43867 - chrX 815100 intron CG43867 - chrX 817949 intron CG43867 - chrX_14_815001 chrX_815001 RAL-907 2355 chrX 827597 827630 chrX 835403 835436 roo 13 7808 3.5 5.0 4.2 2.5 7839 chrX 827597 intron CG43867 - chrX 831516 intron CG43867 - chrX 835436 intron CG43867 - chrX_13_830001 chrX_830001 RAL-907 2356 chrX 1196441 1196471 chrX 1196543 1196568 9 101 2.0 5.5 3.8 1.9 127 chrX 1196441 3` UTR CG11380 + chrX 1196504 3` UTR CG11380 + chrX 1196568 3` UTR CG11380 + chrX_9_1195001 chrX_1195001 RAL-907 2357 chrX 1253714 1253762 chrX 1253816 1253864 7 100 1.5 2.5 2.0 2.3 150 chrX 1253714 intron Atf3 - chrX 1253789 intron Atf3 - chrX 1253864 intron Atf3 - chrX_7_1250001 chrX_1250001 RAL-907 2358 chrX 1357759 1357803 chrX 1367949 1367992 Doc 11 10190 4.0 5.0 4.5 2.0 10233 chrX 1357759 intergenic png - chrX 1362876 intergenic not near genes chrX 1367992 intergenic not near genes chrX_11_1360001 chrX_1360001 RAL-907 2359 chrX 1386389 1386416 chrX 1386476 1386520 14 94 3.5 1.5 2.5 4.0 131 chrX 1386389 intron CG32813 + chrX 1386454 intron CG32813 + chrX 1386520 intron CG32813 + chrX_14_1385001 chrX_1385001 RAL-907 2360 chrX 1428577 1428623 chrX 1428683 1428729 11 105 2.5 3.5 3.0 2.8 152 chrX 1428577 intron futsch + chrX 1428653 intron futsch + chrX 1428729 intron futsch + chrX_11_1425001 chrX_1425001 RAL-907 2361 chrX 1429618 1429641 chrX 1429700 1429729 6 85 2.0 2.0 2.0 2.0 111 chrX 1429618 intron futsch + chrX 1429674 intron futsch + chrX 1429729 intron futsch + chrX_6_1425001 chrX_1425001 RAL-907 2362 chrX 1518033 1518038 chrX 1523441 1523455 jockey 5 5416 3.0 6.0 4.5 0.9 5422 chrX 1518033 intergenic inc + chrX 1520744 intergenic not near genes chrX 1523455 intergenic not near genes chrX_5_1520001 chrX_1520001 RAL-907 2363 chrX 1518045 1518070 chrX 1523436 1523492 jockey 4 5408 2.0 5.0 3.5 0.9 5447 chrX 1518045 intergenic inc + chrX 1520768 intergenic not near genes chrX 1523492 intergenic not near genes chrX_4_1520001 chrX_1520001 RAL-907 2364 chrX 1569650 1569689 chrX 1569747 1569786 8 93 3.0 1.5 2.2 2.5 136 chrX 1569650 intron Mur2B - chrX 1569718 intron Mur2B - chrX 1569786 intron Mur2B - chrX_8_1565001 chrX_1565001 RAL-907 2365 chrX 1930517 1930553 chrX 1938108 1938143 opus 12 7590 6.0 5.5 5.8 1.8 7626 chrX 1930517 3` UTR CG11596 + chrX 1934330 intergenic not near genes chrX 1938143 3` UTR CG3857 - chrX_12_1930001 chrX_1930001 RAL-907 2366 chrX 1930557 1930570 chrX 1938107 1938161 opus 6 7577 3.5 5.5 4.5 1.1 7604 chrX 1930557 intergenic CG11596 + chrX 1934359 intergenic not near genes chrX 1938161 3` UTR CG3857 - chrX_6_1930001 chrX_1930001 RAL-907 2367 chrX 2023950 2023968 chrX 2024093 2024111 7 142 23.5 24.5 24.0 0.3 161 chrX 2023950 3` UTR,3` UTR east +,Actn - chrX 2024030 3` UTR,3` UTR east +,Actn - chrX 2024111 3` UTR,3` UTR east +,Actn - chrX_7_2020001 chrX_2020001 RAL-907 2368 chrX 2023970 2023983 chrX 2024078 2024090 7 123 22.5 25.5 24.0 0.3 120 chrX 2023970 3` UTR,3` UTR east +,Actn - chrX 2024030 3` UTR,3` UTR east +,Actn - chrX 2024090 3` UTR,3` UTR east +,Actn - chrX_7_2020001 chrX_2020001 RAL-907 2369 chrX 2098605 2098636 chrX 2098686 2098715 4 80 4.5 3.5 4.0 0.8 110 chrX 2098605 intron csw + chrX 2098660 intron csw + chrX 2098715 intron csw + chrX_4_2095001 chrX_2095001 RAL-907 2370 chrX 2188669 2188680 chrX 2188753 2188755 5 93 2.0 2.0 2.0 1.7 86 chrX 2188669 3` UTR CG3457 + chrX 2188712 3` UTR CG3457 + chrX 2188755 3` UTR CG3457 + chrX_5_2185001 chrX_2185001 RAL-907 2371 chrX 2461501 2461531 chrX 2461667 2461714 6 176 3.0 3.0 3.0 1.5 213 chrX 2461501 intron boi - chrX 2461608 intron boi - chrX 2461714 intron boi - chrX_6_2460001 chrX_2460001 RAL-907 2372 chrX 2578796 2578845 chrX 2578920 2578969 5 120 1.5 3.5 2.5 1.4 173 chrX 2578796 intergenic Pdfr +,Vha36-3 - chrX 2578882 intergenic Vha36-3 -,Pdfr + chrX 2578969 intergenic Vha36-3 -,Pdfr + chrX_5_2575001 chrX_2575001 RAL-907 2373 chrX 2664370 2664415 chrX 2665535 2665576 1360 11 1164 6.0 7.0 6.5 1.5 1206 chrX 2664370 intron sgg + chrX 2664973 intron sgg + chrX 2665576 intron sgg + chrX_11_2660001 chrX_2660001 RAL-907 2374 chrX 2745550 2745581 chrX 2745730 2745747 6 181 2.5 2.5 2.5 1.7 197 chrX 2745550 intron kirre + chrX 2745648 intron kirre + chrX 2745747 intron kirre + chrX_6_2745001 chrX_2745001 RAL-907 2375 chrX 2814045 2814051 chrX 2814172 2814178 4 127 2.5 0.0 1.2 1.8 133 chrX 2814045 intron kirre + chrX 2814112 intron kirre + chrX 2814178 intron kirre + chrX_4_2810001 chrX_2810001 RAL-907 2376 chrX 2844883 2844930 chrX 2852313 2852360 mdg1 9 7428 1.5 2.5 2.0 3.0 7477 chrX 2844883 intron kirre + chrX 2848622 intron kirre + chrX 2852360 intron kirre + chrX_9_2845001 chrX_2845001 RAL-907 2377 chrX 3031158 3031177 chrX 3031264 3031280 5 104 1.0 6.5 3.8 1.0 122 chrX 3031158 intron kirre + chrX 3031219 intron kirre + chrX 3031280 intron kirre + chrX_5_3030001 chrX_3030001 RAL-907 2378 chrX 3058002 3058030 chrX 3058263 3058291 pogo 7 261 6.5 4.5 5.5 1.1 289 chrX 3058002 intron kirre + chrX 3058146 intron kirre + chrX 3058291 intron kirre + chrX_7_3055001 chrX_3055001 RAL-907 2379 chrX 3075616 3075661 chrX 3080940 3080987 Transpac 4 5322 3.0 4.5 3.8 0.8 5371 chrX 3075616 intron kirre + chrX 3078302 intron kirre + chrX 3080987 intron kirre + chrX_4_3075001 chrX_3075001 RAL-907 2380 chrX 3109427 3109472 chrX 3109522 3109568 9 97 1.5 1.0 1.2 4.1 141 chrX 3109427 intron kirre + chrX 3109498 intron kirre + chrX 3109568 intron kirre + chrX_9_3105001 chrX_3105001 RAL-907 2381 chrX 3218491 3218537 chrX 3227660 3227706 roo 15 9169 2.5 5.5 4.0 3.0 9215 chrX 3218491 intron dnc + chrX 3223098 intron dnc + chrX 3227706 intron dnc + chrX_15_3220001 chrX_3220001 RAL-907 2382 chrX 3243615 3243656 chrX 3243725 3243766 10 110 3.5 3.0 3.2 2.4 151 chrX 3243615 intron dnc + chrX 3243690 intron dnc + chrX 3243766 intron dnc + chrX_10_3240001 chrX_3240001 RAL-907 2383 chrX 3306325 3306376 chrX 3306427 3306470 10 100 3.0 0.5 1.8 3.6 145 chrX 3306325 intron dnc + chrX 3306398 intron dnc + chrX 3306470 intron dnc + chrX_10_3305001 chrX_3305001 RAL-907 2384 chrX 3351786 3351810 chrX 3351890 3351894 4 97 3.0 8.0 5.5 0.6 108 chrX 3351786 intergenic not near genes chrX 3351840 intergenic not near genes chrX 3351894 intergenic not near genes chrX_4_3350001 chrX_3350001 RAL-907 2385 chrX 3408972 3409016 chrX 3409062 3409113 14 96 0.5 1.5 1.0 7.0 141 chrX 3408972 intron,intron CR44999 +,CG12535 - chrX 3409042 intron,intron CR44999 +,CG12535 - chrX 3409113 intron,intron CR44999 +,CG12535 - chrX_14_3405001 chrX_3405001 RAL-907 2386 chrX 3493074 3493119 chrX 3502253 3502272 roo 8 9172 4.0 2.0 3.0 2.0 9198 chrX 3493074 intron,intron CR44999 +,Gas8 - chrX 3497673 intron,intron CR44999 +,Gas8 - chrX 3502272 intron,intron CR44999 +,Gas8 - chrX_8_3495001 chrX_3495001 RAL-907 2387 chrX 3535389 3535428 chrX 3535502 3535539 6 112 2.5 5.5 4.0 1.2 150 chrX 3535389 intron CG32791 - chrX 3535464 intron CG32791 - chrX 3535539 intron CG32791 - chrX_6_3535001 chrX_3535001 RAL-907 2388 chrX 3597536 3597580 chrX 3619724 3619763 roo 10 22186 2.0 3.5 2.8 2.6 22227 chrX 3597536 intron AstA-R1 + chrX 3608650 intron AstA-R1 + chrX 3619763 intron AstA-R1 + chrX_10_3605001 chrX_3605001 RAL-907 2389 chrX 3630532 3630575 chrX 3630628 3630671 8 92 2.0 1.5 1.8 2.9 139 chrX 3630532 intron AstA-R1 + chrX 3630602 intron AstA-R1 + chrX 3630671 intron AstA-R1 + chrX_8_3630001 chrX_3630001 RAL-907 2390 chrX 3713114 3713128 chrX 3713243 3713257 5 129 3.5 4.5 4.0 1.0 143 chrX 3713114 intron Rala - chrX 3713186 intron Rala - chrX 3713257 intron Rala - chrX_5_3710001 chrX_3710001 RAL-907 2391 chrX 3726749 3726787 chrX 3730166 3730204 NOF 4 3417 2.5 4.5 3.5 0.9 3455 chrX 3726749 intron tlk + chrX 3728476 intron tlk + chrX 3730204 intron tlk + chrX_4_3725001 chrX_3725001 RAL-907 2392 chrX 3842308 3842350 chrX 3842568 3842606 pogo 7 257 1.5 2.5 2.0 2.3 298 chrX 3842308 intron ec + chrX 3842457 intron ec + chrX 3842606 intron ec + chrX_7_3840001 chrX_3840001 RAL-907 2393 chrX 3866109 3866135 chrX 3866186 3866221 10 88 2.5 0.5 1.5 4.0 112 chrX 3866109 intron yin - chrX 3866165 intron yin - chrX 3866221 intron yin - chrX_10_3865001 chrX_3865001 RAL-907 2394 chrX 3880457 3880486 chrX 3880563 3880592 5 106 2.5 8.5 5.5 0.8 135 chrX 3880457 intergenic VhaAC39-1 + chrX 3880524 intergenic VhaAC39-1 + chrX 3880592 intergenic VhaAC39-1 + chrX_5_3880001 chrX_3880001 RAL-907 2395 chrX 3881252 3881293 chrX 3881411 3881452 13 159 2.5 1.5 2.0 4.3 200 chrX 3881252 intron VhaAC39-1 + chrX 3881352 intron VhaAC39-1 + chrX 3881452 intron VhaAC39-1 + chrX_13_3880001 chrX_3880001 RAL-907 2396 chrX 3986876 3986888 chrX 3994501 3994541 412 8 7643 2.5 4.0 3.2 1.9 7665 chrX 3986876 intergenic not near genes chrX 3990708 intergenic not near genes chrX 3994541 intergenic not near genes chrX_8_3990001 chrX_3990001 RAL-907 2397 chrX 4047469 4047496 chrX 4047582 4047603 6 118 2.5 2.5 2.5 1.7 134 chrX 4047469 intergenic CR45482 - chrX 4047536 intergenic CR45482 - chrX 4047603 3` UTR CR45482 - chrX_6_4045001 chrX_4045001 RAL-907 2398 chrX 4048480 4048523 chrX 4048576 4048619 10 96 4.5 2.0 3.2 2.4 139 chrX 4048480 3` UTR CR45482 - chrX 4048550 3` UTR CR45482 - chrX 4048619 3` UTR CR45482 - chrX_10_4045001 chrX_4045001 RAL-907 2399 chrX 4101847 4101890 chrX 4101946 4101990 4 92 0.5 3.5 2.0 1.3 143 chrX 4101847 exon CG15375 + chrX 4101918 exon CG15375 + chrX 4101990 exon CG15375 + chrX_4_4100001 chrX_4100001 RAL-907 2400 chrX 4132647 4132688 chrX 4132835 4132876 8 188 4.0 4.0 4.0 1.6 229 chrX 4132647 3` UTR GlcAT-I + chrX 4132762 3` UTR GlcAT-I + chrX 4132876 intergenic Fas2 -,GlcAT-I + chrX_8_4130001 chrX_4130001 RAL-907 2401 chrX 4157879 4157921 chrX 4164952 4164993 297 6 7073 2.0 2.0 2.0 2.0 7114 chrX 4157879 intron Fas2 - chrX 4161436 intron Fas2 - chrX 4164993 intron Fas2 - chrX_6_4160001 chrX_4160001 RAL-907 2402 chrX 4409120 4409149 chrX 4409225 4409240 10 98 9.5 3.5 6.5 1.3 120 chrX 4409120 intron CR32773 - chrX 4409180 intron CR32773 - chrX 4409240 intron CR32773 - chrX_10_4405001 chrX_4405001 RAL-907 2403 chrX 4417785 4417798 chrX 4417877 4417896 5 97 0.0 0.0 0.0 5.0 111 chrX 4417785 intron,intron CR32773 -,bi + chrX 4417840 intron,intron CR32773 -,bi + chrX 4417896 intron,intron CR32773 -,bi + chrX_5_4415001 chrX_4415001 RAL-907 2404 chrX 4525737 4525771 chrX 4525849 4525883 14 110 3.5 3.5 3.5 3.1 146 chrX 4525737 intron CR32773 - chrX 4525810 intron CR32773 - chrX 4525883 intron CR32773 - chrX_14_4525001 chrX_4525001 RAL-907 2405 chrX 4613544 4613570 chrX 4613636 4613669 4 96 1.0 4.5 2.8 1.1 125 chrX 4613544 intergenic not near genes chrX 4613606 intergenic not near genes chrX 4613669 intergenic not near genes chrX_4_4610001 chrX_4610001 RAL-907 2406 chrX 4700377 4700426 chrX 4700740 4700789 jockey 8 357 2.5 4.5 3.5 1.8 412 chrX 4700377 3` UTR ctp + chrX 4700583 3` UTR ctp + chrX 4700789 3` UTR ctp + chrX_8_4700001 chrX_4700001 RAL-907 2407 chrX 4744138 4744167 chrX 4744256 4744285 8 117 3.0 0.0 1.5 3.2 147 chrX 4744138 intergenic not near genes chrX 4744212 intergenic not near genes chrX 4744285 intergenic not near genes chrX_8_4740001 chrX_4740001 RAL-907 2408 chrX 4763240 4763271 chrX 4763743 4763779 Stalker4 4 504 2.0 2.5 2.2 1.2 539 chrX 4763240 intergenic not near genes chrX 4763510 intergenic not near genes chrX 4763779 intergenic not near genes chrX_4_4760001 chrX_4760001 RAL-907 2409 chrX 4792364 4792405 chrX 4792817 4792848 jockey 6 451 4.0 4.5 4.2 1.2 484 chrX 4792364 intergenic not near genes chrX 4792606 intergenic not near genes chrX 4792848 intergenic not near genes chrX_6_4790001 chrX_4790001 RAL-907 2410 chrX 4827959 4827974 chrX 4835350 4835365 Stalker4 4 7387 6.0 4.0 5.0 0.7 7406 chrX 4827959 intergenic not near genes chrX 4831662 intergenic not near genes chrX 4835365 intergenic not near genes chrX_4_4830001 chrX_4830001 RAL-907 2411 chrX 4827976 4828000 chrX 4835344 4835351 Stalker4 4 7375 5.0 4.0 4.5 0.7 7375 chrX 4827976 intergenic not near genes chrX 4831664 intergenic not near genes chrX 4835351 intergenic not near genes chrX_4_4830001 chrX_4830001 RAL-907 2412 chrX 4990023 4990073 chrX 4997257 4997306 roo 16 7232 3.0 4.0 3.5 3.6 7283 chrX 4990023 intron CR44833 - chrX 4993664 intron CR44833 - chrX 4997306 intron CR44833 - chrX_16_4990001 chrX_4990001 RAL-907 2413 chrX 5096258 5096301 chrX 5103843 5103886 springer 10 7585 1.5 6.0 3.8 2.1 7628 chrX 5096258 intron,intron CG15465 +,rg + chrX 5100072 intron,intron CG15465 +,rg + chrX 5103886 intron,intron CG15465 +,rg + chrX_10_5100001 chrX_5100001 RAL-907 2414 chrX 5272832 5272848 chrX 5272921 5272955 5 98 1.5 2.5 2.0 1.7 123 chrX 5272832 intergenic not near genes chrX 5272894 intergenic not near genes chrX 5272955 intergenic not near genes chrX_5_5270001 chrX_5270001 RAL-907 2415 chrX 5329436 5329475 chrX 5329553 5329590 5 114 3.0 0.5 1.8 1.8 154 chrX 5329436 intergenic CG3309 -,XRCC1 + chrX 5329513 intergenic CG3309 -,XRCC1 + chrX 5329590 intergenic CG3309 -,XRCC1 + chrX_5_5325001 chrX_5325001 RAL-907 2416 chrX 5349281 5349308 chrX 5349358 5349405 9 95 0.5 3.5 2.0 3.0 124 chrX 5349281 intron SK + chrX 5349343 intron SK + chrX 5349405 intron SK + chrX_9_5345001 chrX_5345001 RAL-907 2417 chrX 5350296 5350312 chrX 5350412 5350422 5 115 2.0 5.0 3.5 1.1 126 chrX 5350296 intron SK + chrX 5350359 intron SK + chrX 5350422 intron SK + chrX_5_5350001 chrX_5350001 RAL-907 2418 chrX 5441971 5442013 chrX 5442096 5442141 5 126 0.0 2.5 1.2 2.3 170 chrX 5441971 intergenic not near genes chrX 5442056 intergenic not near genes chrX 5442141 intergenic not near genes chrX_5_5440001 chrX_5440001 RAL-907 2419 chrX 5458370 5458395 chrX 5458577 5458601 5 207 2.0 2.5 2.2 1.6 231 chrX 5458370 intron SPR + chrX 5458486 intron SPR + chrX 5458601 intron SPR + chrX_5_5455001 chrX_5455001 RAL-907 2420 chrX 5501470 5501511 chrX 5501579 5501621 10 110 3.5 1.0 2.2 3.1 151 chrX 5501470 intergenic CG4151 +,CG32762 - chrX 5501546 5` UTR CG4151 + chrX 5501621 5` UTR CG4151 + chrX_10_5500001 chrX_5500001 RAL-907 2421 chrX 5512032 5512079 chrX 5512135 5512186 5 104 5.5 0.0 2.8 1.3 154 chrX 5512032 intergenic not near genes chrX 5512109 intergenic not near genes chrX 5512186 intergenic not near genes chrX_5_5510001 chrX_5510001 RAL-907 2422 chrX 5524823 5524857 chrX 5528706 5528740 412 10 3883 5.0 3.0 4.0 2.0 3917 chrX 5524823 intergenic snoRNA:Psi28S-3342 - chrX 5526782 intergenic not near genes chrX 5528740 intergenic Vsx2 - chrX_10_5525001 chrX_5525001 RAL-907 2423 chrX 5727404 5727413 chrX 5732162 5732172 Doc 4 4759 7.0 4.0 5.5 0.6 4768 chrX 5727404 intron CG32758 - chrX 5729788 intron CG32758 - chrX 5732172 intron CG32758 - chrX_4_5725001 chrX_5725001 RAL-907 2424 chrX 5884142 5884190 chrX 5884403 5884451 pogo 5 260 3.5 1.5 2.5 1.4 309 chrX 5884142 intron CR45668 - chrX 5884296 intron CR45668 - chrX 5884451 intron CR45668 - chrX_5_5880001 chrX_5880001 RAL-907 2425 chrX 6003268 6003311 chrX 6003364 6003412 21 99 0.0 3.5 1.8 7.5 144 chrX 6003268 intron CR44498 + chrX 6003340 intron CR44498 + chrX 6003412 intron CR44498 + chrX_21_6000001 chrX_6000001 RAL-907 2426 chrX 6053212 6053229 chrX 6053338 6053340 4 120 4.0 6.5 5.2 0.6 128 chrX 6053212 intron CG5921 + chrX 6053276 intron CG5921 + chrX 6053340 intron CG5921 + chrX_4_6050001 chrX_6050001 RAL-907 2427 chrX 6171566 6171615 chrX 6179019 6179068 Quasimodo 19 7451 3.5 4.0 3.8 4.0 7502 chrX 6171566 intron Ca-alpha1T - chrX 6175317 intron Ca-alpha1T - chrX 6179068 intron Ca-alpha1T - chrX_19_6175001 chrX_6175001 RAL-907 2428 chrX 6215198 6215217 chrX 12298263 12298264 10 6083055 1.5 2.0 1.8 3.6 6083066 chrX 6215198 intergenic not near genes chrX 9256731 exon ric8a + chrX 12298264 intron Ten-a + chrX_10_9255001 chrX_9255001 RAL-907 2429 chrX 6315159 6315208 chrX 6315257 6315306 10 96 2.5 4.0 3.2 2.4 147 chrX 6315159 intron CG15894 + chrX 6315232 intron CG15894 + chrX 6315306 intron CG15894 + chrX_10_6315001 chrX_6315001 RAL-907 2430 chrX 6335218 6335239 chrX 6337747 6337769 Tirant 6 2527 0.0 6.0 3.0 1.5 2551 chrX 6335218 intergenic not near genes chrX 6336494 intergenic not near genes chrX 6337769 5` UTR CG3842 + chrX_6_6335001 chrX_6335001 RAL-907 2431 chrX 6370545 6370577 chrX 6370644 6370672 5 103 4.5 1.5 3.0 1.2 127 chrX 6370545 3` UTR Marf + chrX 6370608 3` UTR,3` UTR Marf +,CR44816 - chrX 6370672 3` UTR,3` UTR Marf +,CR44816 - chrX_5_6370001 chrX_6370001 RAL-907 2432 chrX 6591835 6591873 chrX 6591940 6591978 9 105 2.5 0.0 1.2 4.1 143 chrX 6591835 intron Pat1 + chrX 6591906 intron Pat1 + chrX 6591978 intron Pat1 + chrX_9_6590001 chrX_6590001 RAL-907 2433 chrX 6647639 6647663 chrX 6647726 6647760 5 98 1.5 5.0 3.2 1.2 121 chrX 6647639 intron pigs + chrX 6647700 intron pigs + chrX 6647760 intron pigs + chrX_5_6645001 chrX_6645001 RAL-907 2434 chrX 6737521 6737545 chrX 6737605 6737641 7 84 2.0 2.5 2.2 2.2 120 chrX 6737521 intron CG3168 - chrX 6737581 intron CG3168 - chrX 6737641 intron CG3168 - chrX_7_6735001 chrX_6735001 RAL-907 2435 chrX 6897585 6897704 chrX 6897652 6897811 14 115 1.5 0.5 1.0 7.0 226 chrX 6897585 intergenic not near genes chrX 6897698 intergenic not near genes chrX 6897811 intergenic not near genes chrX_14_6895001 chrX_6895001 RAL-907 2436 chrX 7023581 7023623 chrX 7030991 7031021 Tabor 5 7407 6.5 2.0 4.2 1.0 7440 chrX 7023581 intron CG12541 - chrX 7027301 intron CG12541 - chrX 7031021 intron CG12541 - chrX_5_7025001 chrX_7025001 RAL-907 2437 chrX 7125226 7125274 chrX 7134405 7134448 roo 12 9178 0.0 3.0 1.5 4.8 9222 chrX 7125226 intergenic not near genes chrX 7129837 intergenic not near genes chrX 7134448 intergenic not near genes chrX_12_7125001 chrX_7125001 RAL-907 2438 chrX 7322887 7322930 chrX 7322988 7323004 12 96 5.5 5.0 5.2 1.9 117 chrX 7322887 intron,intron,intron CR44357 -,CG1677 -,Atg5 - chrX 7322946 intron,intron,intron CR44357 -,CG1677 -,Atg5 - chrX 7323004 intron,intron,intron CR44357 -,CG1677 -,Atg5 - chrX_12_7320001 chrX_7320001 RAL-907 2439 chrX 7345188 7345213 chrX 7345295 7345325 10 110 1.0 4.0 2.5 2.9 137 chrX 7345188 intron,intron CR44357 -,CG1677 - chrX 7345256 intron,intron CR44357 -,CG1677 - chrX 7345325 intron,intron CR44357 -,CG1677 - chrX_10_7345001 chrX_7345001 RAL-907 2440 chrX 7350567 7350594 chrX 7350672 7350698 5 100 1.5 4.0 2.8 1.3 131 chrX 7350567 intron,intron CR44357 -,CG1677 - chrX 7350632 intron,intron CR44357 -,CG1677 - chrX 7350698 intron,intron CR44357 -,CG1677 - chrX_5_7350001 chrX_7350001 RAL-907 2441 chrX 7470215 7470219 chrX 7470323 7470327 4 108 4.0 2.0 3.0 1.0 112 chrX 7470215 intergenic not near genes chrX 7470271 intergenic not near genes chrX 7470327 intergenic not near genes chrX_4_7470001 chrX_7470001 RAL-907 2442 chrX 7552232 7552265 chrX 7552329 7552362 6 97 3.0 0.0 1.5 2.4 130 chrX 7552232 intergenic not near genes chrX 7552297 intergenic not near genes chrX 7552362 intergenic not near genes chrX_6_7550001 chrX_7550001 RAL-907 2443 chrX 7702888 7702931 chrX 7703347 7703366 jockey 10 453 4.0 1.0 2.5 2.9 478 chrX 7702888 intron CHES-1-like - chrX 7703127 intron CHES-1-like - chrX 7703366 intron CHES-1-like - chrX_10_7700001 chrX_7700001 RAL-907 2444 chrX 7845719 7845758 chrX 7847219 7847269 hopper2 5 1508 2.5 6.0 4.2 1.0 1550 chrX 7845719 intergenic not near genes chrX 7846494 intergenic not near genes chrX 7847269 intergenic not near genes chrX_5_7845001 chrX_7845001 RAL-907 2445 chrX 7960857 7960903 chrX 7960966 7961012 15 109 2.5 4.0 3.2 3.6 155 chrX 7960857 intron,5` UTR sws -,CR45620 + chrX 7960934 intron sws - chrX 7961012 intron sws - chrX_15_7960001 chrX_7960001 RAL-907 2446 chrX 7968500 7968526 chrX 7968648 7968675 5 149 6.0 5.0 5.5 0.8 175 chrX 7968500 intron sn + chrX 7968588 intron sn + chrX 7968675 intron sn + chrX_5_7965001 chrX_7965001 RAL-907 2447 chrX 8031431 8031447 chrX 8035760 8035776 Juan 5 4329 4.5 6.0 5.2 0.8 4345 chrX 8031431 intergenic not near genes chrX 8033604 intergenic not near genes chrX 8035776 3` UTR CG2233 - chrX_5_8030001 chrX_8030001 RAL-907 2448 chrX 8063713 8063768 chrX 8063832 8063885 8 112 7.0 3.0 5.0 1.3 172 chrX 8063713 intron mys + chrX 8063799 intron mys + chrX 8063885 5` UTR mys + chrX_8_8060001 chrX_8060001 RAL-907 2449 chrX 8079906 8079934 chrX 8080036 8080064 9 130 2.0 4.0 3.0 2.2 158 chrX 8079906 exon CG2254 - chrX 8079985 intron CG2254 - chrX 8080064 intron CG2254 - chrX_9_8075001 chrX_8075001 RAL-907 2450 chrX 8500915 8500947 chrX 8501099 8501131 18 184 5.0 0.0 2.5 5.1 216 chrX 8500915 intron CG33181 + chrX 8501023 intron CG33181 + chrX 8501131 intron CG33181 + chrX_18_8500001 chrX_8500001 RAL-907 2451 chrX 8743939 8743966 chrX 8744045 8744089 9 121 2.0 2.0 2.0 3.0 150 chrX 8743939 intergenic not near genes chrX 8744014 intergenic not near genes chrX 8744089 intergenic not near genes chrX_9_8740001 chrX_8740001 RAL-907 2452 chrX 8771248 8771258 chrX 8771333 8771349 5 91 2.0 7.5 4.8 0.9 101 chrX 8771248 intron Lim1 - chrX 8771298 intron Lim1 - chrX 8771349 intron Lim1 - chrX_5_8770001 chrX_8770001 RAL-907 2453 chrX 8860782 8860800 chrX 8860873 8860899 6 101 0.0 6.0 3.0 1.5 117 chrX 8860782 intron CG12075 + chrX 8860840 intron CG12075 + chrX 8860899 intron CG12075 + chrX_6_8860001 chrX_8860001 RAL-907 2454 chrX 8894978 8894999 chrX 8895084 8895105 8 106 5.5 1.0 3.2 1.9 127 chrX 8894978 intron Moe - chrX 8895042 intron Moe - chrX 8895105 intron Moe - chrX_8_8895001 chrX_8895001 RAL-907 2455 chrX 8922330 8922357 chrX 8922761 8922762 jockey 10 422 2.0 3.0 2.5 2.9 432 chrX 8922330 intron rdgA + chrX 8922546 intron rdgA + chrX 8922762 intron rdgA + chrX_10_8920001 chrX_8920001 RAL-907 2456 chrX 8948759 8948790 chrX 8956274 8956313 roo 6 7526 1.5 4.0 2.8 1.6 7554 chrX 8948759 intron rdgA + chrX 8952536 intron rdgA + chrX 8956313 intron rdgA + chrX_6_8950001 chrX_8950001 RAL-907 2457 chrX 9218059 9218085 chrX 9218170 9218195 5 110 3.5 0.0 1.8 1.8 136 chrX 9218059 3` UTR t - chrX 9218127 3` UTR t - chrX 9218195 3` UTR t - chrX_5_9215001 chrX_9215001 RAL-907 2458 chrX 9272997 9273041 chrX 9273098 9273142 16 99 2.5 4.0 3.2 3.8 145 chrX 9272997 intergenic Cfp1 -,CG16892 + chrX 9273070 intergenic Cfp1 -,CG16892 + chrX 9273142 intergenic Cfp1 -,CG16892 + chrX_16_9270001 chrX_9270001 RAL-907 2459 chrX 9337923 9337971 chrX 9338035 9338072 10 107 2.0 1.0 1.5 4.0 149 chrX 9337923 intron CG34449 - chrX 9337998 intron CG34449 - chrX 9338072 exon CG34449 - chrX_10_9335001 chrX_9335001 RAL-907 2460 chrX 9439602 9439650 chrX 9439847 9439893 11 245 1.5 1.5 1.5 4.4 291 chrX 9439602 intron mgl - chrX 9439748 intron mgl - chrX 9439893 intron mgl - chrX_11_9435001 chrX_9435001 RAL-907 2461 chrX 9469276 9469317 chrX 9469765 9469801 9 488 4.5 8.5 6.5 1.2 525 chrX 9469276 intron mgl - chrX 9469538 intron mgl - chrX 9469801 intron mgl - chrX_9_9465001 chrX_9465001 RAL-907 2462 chrX 9508142 9508159 chrX 9509680 9509694 jockey 5 1536 8.0 3.0 5.5 0.8 1552 chrX 9508142 intron CG32700 - chrX 9508918 intron CG32700 - chrX 9509694 intron CG32700 - chrX_5_9505001 chrX_9505001 RAL-907 2463 chrX 9543377 9543423 chrX 9543476 9543522 14 98 3.5 1.5 2.5 4.0 145 chrX 9543377 intron CG32700 - chrX 9543450 intron CG32700 - chrX 9543522 intron CG32700 - chrX_14_9540001 chrX_9540001 RAL-907 2464 chrX 9575793 9575796 chrX 9576127 9576135 mdg3 4 336 3.5 5.0 4.2 0.8 342 chrX 9575793 intron,exon CG32699 -,CG42395 - chrX 9575964 intron,intron CG32699 -,CG42395 - chrX 9576135 intron,5` UTR CG32699 -,CG42395 - chrX_4_9575001 chrX_9575001 RAL-907 2465 chrX 9575797 9575801 chrX 9576119 9576131 mdg3 4 330 3.0 3.0 3.0 1.0 334 chrX 9575797 intron,exon CG32699 -,CG42395 - chrX 9575964 intron,intron CG32699 -,CG42395 - chrX 9576131 intron,exon CG32699 -,CG42395 - chrX_4_9575001 chrX_9575001 RAL-907 2466 chrX 9668713 9668725 chrX 9668811 9668823 4 98 4.0 3.5 3.8 0.8 110 chrX 9668713 3` UTR nej - chrX 9668768 3` UTR nej - chrX 9668823 3` UTR nej - chrX_4_9665001 chrX_9665001 RAL-907 2467 chrX 9758027 9758082 chrX 9758132 9758187 6 105 3.0 0.0 1.5 2.4 160 chrX 9758027 intergenic not near genes chrX 9758107 intergenic not near genes chrX 9758187 intergenic not near genes chrX_6_9755001 chrX_9755001 RAL-907 2468 chrX 9839327 9839368 chrX 9839430 9839470 5 102 0.0 2.0 1.0 2.5 143 chrX 9839327 intron CG32698 + chrX 9839398 intron CG32698 + chrX 9839470 intron CG32698 + chrX_5_9835001 chrX_9835001 RAL-907 2469 chrX 10134007 10134031 chrX 10134087 10134132 7 102 0.5 6.0 3.2 1.7 125 chrX 10134007 exon,intron RhoU +,CR44894 - chrX 10134070 exon,intron RhoU +,CR44894 - chrX 10134132 intron,intron RhoU +,CR44894 - chrX_7_10130001 chrX_10130001 RAL-907 2470 chrX 10138199 10138247 chrX 10145723 10145769 412 9 7523 4.5 8.0 6.2 1.2 7570 chrX 10138199 intron,intron RhoU +,CR44894 - chrX 10141984 intron,intron RhoU +,CR44894 - chrX 10145769 intron,intron RhoU +,CR44894 - chrX_9_10140001 chrX_10140001 RAL-907 2471 chrX 10154264 10154307 chrX 10154360 10154403 8 96 7.0 2.0 4.5 1.5 139 chrX 10154264 intron,intron CR44894 -,CG12645 + chrX 10154334 intron,intron CR44894 -,CG12645 + chrX 10154403 intron,exon CR44894 -,CG12645 + chrX_8_10150001 chrX_10150001 RAL-907 2472 chrX 10196170 10196218 chrX 10196299 10196340 5 125 4.0 3.0 3.5 1.1 170 chrX 10196170 intron CR44894 - chrX 10196255 intron CR44894 - chrX 10196340 intron CR44894 - chrX_5_10195001 chrX_10195001 RAL-907 2473 chrX 10267299 10267334 chrX 10276469 10276504 roo 7 9170 0.0 3.5 1.8 2.5 9205 chrX 10267299 3` UTR alpha-Man-I - chrX 10271902 intron alpha-Man-I - chrX 10276504 3` UTR alpha-Man-I - chrX_7_10270001 chrX_10270001 RAL-907 2474 chrX 10317559 10317579 chrX 10317632 10317677 5 90 0.5 1.5 1.0 2.5 118 chrX 10317559 intron alpha-Man-I - chrX 10317618 intron alpha-Man-I - chrX 10317677 intron alpha-Man-I - chrX_5_10315001 chrX_10315001 RAL-907 2475 chrX 10348788 10348825 chrX 10356373 10356410 springer 9 7581 3.5 5.0 4.2 1.7 7622 chrX 10348788 intergenic snoRNA:U3:9B + chrX 10352599 intergenic not near genes chrX 10356410 intergenic l(1)G0289 - chrX_9_10350001 chrX_10350001 RAL-907 2476 chrX 10428855 10428888 chrX 10428965 10428998 10 108 1.5 3.5 2.5 2.9 143 chrX 10428855 intron CG32683 - chrX 10428926 intron CG32683 - chrX 10428998 intron CG32683 - chrX_10_10425001 chrX_10425001 RAL-907 2477 chrX 10532486 10532519 chrX 10532585 10532605 9 97 2.5 4.0 3.2 2.1 119 chrX 10532486 intron spri - chrX 10532546 intron spri - chrX 10532605 intron spri - chrX_9_10530001 chrX_10530001 RAL-907 2478 chrX 10550313 10550362 chrX 10550411 10550435 13 96 4.0 5.0 4.5 2.4 122 chrX 10550313 intron spri - chrX 10550374 intron spri - chrX 10550435 intron spri - chrX_13_10550001 chrX_10550001 RAL-907 2479 chrX 10550838 10550888 chrX 10552325 10552368 hobo 7 1479 3.0 2.0 2.5 2.0 1530 chrX 10550838 intron spri - chrX 10551603 intron spri - chrX 10552368 intron spri - chrX_7_10550001 chrX_10550001 RAL-907 2480 chrX 10651615 10651640 chrX 10651751 10651755 8 133 0.0 4.5 2.2 2.5 140 chrX 10651615 intron X11Lbeta + chrX 10651685 intron X11Lbeta + chrX 10651755 intron X11Lbeta + chrX_8_10650001 chrX_10650001 RAL-907 2481 chrX 10686030 10686068 chrX 10691187 10691225 roo 7 5154 8.0 3.0 5.5 1.1 5195 chrX 10686030 intron X11Lbeta + chrX 10688628 intron X11Lbeta + chrX 10691225 intron X11Lbeta + chrX_7_10685001 chrX_10685001 RAL-907 2482 chrX 10803025 10803045 chrX 10803130 10803150 4 102 4.0 6.0 5.0 0.7 125 chrX 10803025 intron Imp - chrX 10803088 intron Imp - chrX 10803150 intron Imp - chrX_4_10800001 chrX_10800001 RAL-907 2483 chrX 11095989 11096024 chrX 11103111 11103146 HMS-Beagle 5 7122 3.5 3.5 3.5 1.1 7157 chrX 11095989 intergenic not near genes chrX 11099568 intergenic not near genes chrX 11103146 intron CG42249 + chrX_5_11095001 chrX_11095001 RAL-907 2484 chrX 11184238 11184277 chrX 11189328 11189373 flea 5 5095 4.5 3.5 4.0 1.0 5135 chrX 11184238 intergenic not near genes chrX 11186806 intergenic not near genes chrX 11189373 intergenic not near genes chrX_5_11185001 chrX_11185001 RAL-907 2485 chrX 11265331 11265353 chrX 11265778 11265789 5 445 3.0 3.0 3.0 1.2 458 chrX 11265331 intron CG44422 - chrX 11265560 intron CG44422 - chrX 11265789 intron CG44422 - chrX_5_11265001 chrX_11265001 RAL-907 2486 chrX 11312048 11312086 chrX 11319412 11319420 Stalker2 8 7360 2.0 2.5 2.2 2.5 7372 chrX 11312048 intergenic not near genes chrX 11315734 intergenic not near genes chrX 11319420 intergenic not near genes chrX_8_11315001 chrX_11315001 RAL-907 2487 chrX 11379746 11379786 chrX 11379911 11379934 10 160 6.5 5.0 5.8 1.5 188 chrX 11379746 intron dlg1 + chrX 11379840 intron dlg1 + chrX 11379934 intron dlg1 + chrX_10_11375001 chrX_11375001 RAL-907 2488 chrX 11431606 11431626 chrX 11431713 11431733 9 105 0.5 4.0 2.2 2.8 127 chrX 11431606 3` UTR Evi5 - chrX 11431670 3` UTR Evi5 - chrX 11431733 3` UTR Evi5 - chrX_9_11430001 chrX_11430001 RAL-907 2489 chrX 11451252 11451279 chrX 11451624 11451627 4 366 2.5 9.0 5.8 0.6 375 chrX 11451252 intron Evi5 - chrX 11451440 intron Evi5 - chrX 11451627 intron Evi5 - chrX_4_11450001 chrX_11450001 RAL-907 2490 chrX 11535025 11535040 chrX 11541515 11541523 Burdock 5 6486 5.0 2.0 3.5 1.1 6498 chrX 11535025 intron Drak + chrX 11538274 intron Drak + chrX 11541523 intron Drak + chrX_5_11535001 chrX_11535001 RAL-907 2491 chrX 11633397 11633447 chrX 11640471 11640521 297 14 7074 7.5 4.0 5.8 2.1 7124 chrX 11633397 intron Ptp10D + chrX 11636959 intron Ptp10D + chrX 11640521 intron Ptp10D + chrX_14_11635001 chrX_11635001 RAL-907 2492 chrX 11645113 11645136 chrX 11648302 11648326 NOF 4 3190 2.0 5.5 3.8 0.8 3213 chrX 11645113 intron Ptp10D + chrX 11646720 intron Ptp10D + chrX 11648326 intron Ptp10D + chrX_4_11645001 chrX_11645001 RAL-907 2493 chrX 11762215 11762238 chrX 11762321 11762338 9 104 0.0 4.0 2.0 3.0 123 chrX 11762215 intron m + chrX 11762276 intron m + chrX 11762338 intron m + chrX_9_11760001 chrX_11760001 RAL-907 2494 chrX 11804666 11804687 chrX 11804785 11804811 6 123 3.0 3.0 3.0 1.5 145 chrX 11804666 intron Hsc70-3 - chrX 11804738 intron Hsc70-3 - chrX 11804811 intron Hsc70-3 - chrX_6_11800001 chrX_11800001 RAL-907 2495 chrX 11836189 11836211 chrX 11836290 11836312 4 101 2.5 5.0 3.8 0.8 123 chrX 11836189 3` UTR rudhira + chrX 11836250 3` UTR rudhira + chrX 11836312 3` UTR rudhira + chrX_4_11835001 chrX_11835001 RAL-907 2496 chrX 11922343 11922375 chrX 11922496 11922528 4 153 4.0 3.5 3.8 0.8 185 chrX 11922343 exon Sclp - chrX 11922436 intron Sclp - chrX 11922528 intron Sclp - chrX_4_11920001 chrX_11920001 RAL-907 2497 chrX 12248736 12248776 chrX 12248835 12248886 8 105 1.5 1.5 1.5 3.2 150 chrX 12248736 intron Ten-a + chrX 12248811 intron Ten-a + chrX 12248886 intron Ten-a + chrX_8_12245001 chrX_12245001 RAL-907 2498 chrX 12281942 12281972 chrX 12282048 12282078 4 106 2.5 4.0 3.2 1.0 136 chrX 12281942 intron Ten-a + chrX 12282010 intron Ten-a + chrX 12282078 intron Ten-a + chrX_4_12280001 chrX_12280001 RAL-907 2499 chrX 12350763 12350785 chrX 12350864 12350886 5 97 3.5 1.0 2.2 1.6 123 chrX 12350763 intergenic not near genes chrX 12350824 intergenic not near genes chrX 12350886 intergenic not near genes chrX_5_12350001 chrX_12350001 RAL-907 2500 chrX 12356856 12356875 chrX 12356977 12357007 5 130 2.0 5.5 3.8 1.0 151 chrX 12356856 intergenic not near genes chrX 12356932 intergenic not near genes chrX 12357007 intergenic not near genes chrX_5_12355001 chrX_12355001 RAL-907 2501 chrX 12381902 12381904 chrX 12385773 12385796 flea 5 3882 0.0 5.0 2.5 1.4 3894 chrX 12381902 intergenic not near genes chrX 12383849 intergenic not near genes chrX 12385796 intergenic not near genes chrX_5_12380001 chrX_12380001 RAL-907 2502 chrX 12430927 12430963 chrX 12431025 12431061 7 96 2.0 2.5 2.2 2.2 134 chrX 12430927 intergenic not near genes chrX 12430994 intergenic not near genes chrX 12431061 intergenic not near genes chrX_7_12430001 chrX_12430001 RAL-907 2503 chrX 12441194 12441212 chrX 12441315 12441333 4 121 2.0 8.0 5.0 0.7 139 chrX 12441194 intron Pkcdelta + chrX 12441264 intron Pkcdelta + chrX 12441333 intron Pkcdelta + chrX_4_12440001 chrX_12440001 RAL-907 2504 chrX 12442071 12442114 chrX 12442173 12442196 5 98 1.0 0.5 0.8 2.8 125 chrX 12442071 intron Pkcdelta + chrX 12442134 intron Pkcdelta + chrX 12442196 intron Pkcdelta + chrX_5_12440001 chrX_12440001 RAL-907 2505 chrX 12726037 12726083 chrX 12726745 12726780 5 703 2.0 2.5 2.2 1.6 743 chrX 12726037 intron,intron Smr -,CR43963 - chrX 12726408 intron,intron Smr -,CR43963 - chrX 12726780 intron,intron Smr -,CR43963 - chrX_5_12725001 chrX_12725001 RAL-907 2506 chrX 12785406 12785441 chrX 12785502 12785538 13 97 5.5 3.0 4.2 2.5 132 chrX 12785406 intergenic Pde9 -,CG32647 - chrX 12785472 intergenic Pde9 - chrX 12785538 intergenic Pde9 - chrX_13_12785001 chrX_12785001 RAL-907 2507 chrX 12930577 12930606 chrX 12937713 12937742 HMS-Beagle 13 7134 4.0 8.5 6.2 1.8 7165 chrX 12930577 intron fne + chrX 12934160 intron fne + chrX 12937742 intron fne + chrX_13_12930001 chrX_12930001 RAL-907 2508 chrX 11109414 11109417 chrX 12946235 12946235 4 1836819 19.5 19.5 19.5 0.2 1836821 chrX 11109414 intron Hsp60 + chrX 12027824 exon Usp7 - chrX 12946235 3` UTR fne + chrX_4_12025001 chrX_12025001 RAL-907 2509 chrX 12964904 12964933 chrX 12965383 12965414 5 482 0.5 3.5 2.0 1.7 510 chrX 12964904 intergenic not near genes chrX 12965159 intergenic not near genes chrX 12965414 intergenic not near genes chrX_5_12965001 chrX_12965001 RAL-907 2510 chrX 12977050 12977057 chrX 12977146 12977153 4 96 2.0 9.0 5.5 0.6 103 chrX 12977050 intergenic not near genes chrX 12977102 intergenic not near genes chrX 12977153 intergenic not near genes chrX_4_12975001 chrX_12975001 RAL-907 2511 chrX 13146581 13146631 chrX 13146689 13146739 15 108 1.0 1.5 1.2 6.8 158 chrX 13146581 intron CG32645 + chrX 13146660 intron CG32645 + chrX 13146739 intron CG32645 + chrX_15_13145001 chrX_13145001 RAL-907 2512 chrX 13161675 13161715 chrX 13161771 13161812 15 96 3.5 5.5 4.5 2.7 137 chrX 13161675 3` UTR CG12096 + chrX 13161744 3` UTR,3` UTR CG12096 +,CG34411 - chrX 13161812 3` UTR,3` UTR CG12096 +,CG34411 - chrX_15_13160001 chrX_13160001 RAL-907 2513 chrX 13172350 13172374 chrX 13172446 13172458 6 94 1.5 2.0 1.8 2.1 108 chrX 13172350 exon CG34411 - chrX 13172404 intron CG34411 - chrX 13172458 intron CG34411 - chrX_6_13170001 chrX_13170001 RAL-907 2514 chrX 13227339 13227367 chrX 13227438 13227466 4 99 13.0 12.5 12.8 0.3 127 chrX 13227339 intron mew - chrX 13227402 intron mew - chrX 13227466 intron mew - chrX_4_13225001 chrX_13225001 RAL-907 2515 chrX 13269185 13269222 chrX 13269281 13269318 15 93 4.0 4.0 4.0 3.0 133 chrX 13269185 intron HDAC4 - chrX 13269252 intron HDAC4 - chrX 13269318 intron HDAC4 - chrX_15_13265001 chrX_13265001 RAL-907 2516 chrX 13401464 13401516 chrX 13401836 13401887 jockey 11 370 3.5 1.0 2.2 3.4 423 chrX 13401464 intergenic CG1673 +,CG12725 - chrX 13401676 intergenic CG12725 -,CG1673 + chrX 13401887 3` UTR CG12725 - chrX_11_13400001 chrX_13400001 RAL-907 2517 chrX 13429475 13429494 chrX 13430639 13430647 jockey 7 1163 0.0 6.0 3.0 1.8 1172 chrX 13429475 intergenic not near genes chrX 13430061 intergenic not near genes chrX 13430647 intergenic not near genes chrX_7_13430001 chrX_13430001 RAL-907 2518 chrX 13463633 13463678 chrX 13469230 13469249 mdg3 17 5592 3.5 5.5 4.5 3.1 5616 chrX 13463633 intron Neto + chrX 13466441 intron Neto + chrX 13469249 intron Neto + chrX_17_13465001 chrX_13465001 RAL-907 2519 chrX 13550470 13550481 chrX 13550572 13550583 5 102 3.5 0.0 1.8 1.8 113 chrX 13550470 intergenic not near genes chrX 13550526 intergenic not near genes chrX 13550583 intergenic not near genes chrX_5_13550001 chrX_13550001 RAL-907 2520 chrX 13566635 13566681 chrX 13567874 13567915 8 1236 14.0 8.0 11.0 0.7 1280 chrX 13566635 intron Tango13 + chrX 13567275 intron Tango13 + chrX 13567915 intron Tango13 + chrX_8_13565001 chrX_13565001 RAL-907 2521 chrX 13593200 13593227 chrX 13593300 13593323 9 99 0.5 0.5 0.5 6.0 123 chrX 13593200 3` UTR Tango13 + chrX 13593262 intergenic Tango13 +,up - chrX 13593323 intergenic Tango13 +,up - chrX_9_13590001 chrX_13590001 RAL-907 2522 chrX 13934283 13934320 chrX 13934386 13934422 7 103 3.5 2.5 3.0 1.8 139 chrX 13934283 intron mamo - chrX 13934352 intron mamo - chrX 13934422 intron mamo - chrX_7_13930001 chrX_13930001 RAL-907 2523 chrX 13937960 13938004 chrX 13941251 13941295 I-element 12 3290 1.5 0.5 1.0 6.0 3335 chrX 13937960 intron mamo - chrX 13939628 intron mamo - chrX 13941295 intron mamo - chrX_12_13935001 chrX_13935001 RAL-907 2524 chrX 13975879 13975903 chrX 13975976 13976000 8 96 0.0 2.5 1.2 3.6 121 chrX 13975879 intron mamo - chrX 13975940 intron mamo - chrX 13976000 intron mamo - chrX_8_13975001 chrX_13975001 RAL-907 2525 chrX 14105039 14105054 chrX 14114171 14114202 roo 6 9148 2.0 3.0 2.5 1.7 9163 chrX 14105039 intergenic not near genes chrX 14109620 intergenic not near genes chrX 14114202 5` UTR CR44657 + chrX_6_14105001 chrX_14105001 RAL-907 2526 chrX 14131471 14131500 chrX 14131572 14131576 5 93 1.5 2.0 1.8 1.8 105 chrX 14131471 intergenic not near genes chrX 14131524 intergenic not near genes chrX 14131576 intergenic not near genes chrX_5_14130001 chrX_14130001 RAL-907 2527 chrX 14157572 14157599 chrX 14163249 14163276 297 7 5677 8.5 5.0 6.8 0.9 5704 chrX 14157572 intergenic not near genes chrX 14160424 intergenic not near genes chrX 14163276 intergenic not near genes chrX_7_14160001 chrX_14160001 RAL-907 2528 chrX 14168367 14168401 chrX 14168505 14168507 9 129 3.5 3.5 3.5 2.0 140 chrX 14168367 intergenic not near genes chrX 14168437 intergenic not near genes chrX 14168507 intergenic not near genes chrX_9_14165001 chrX_14165001 RAL-907 2529 chrX 14209444 14209481 chrX 14209555 14209592 11 110 4.0 3.5 3.8 2.3 148 chrX 14209444 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209518 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209592 intron,intron l(1)G0007 +,l(1)G0469 - chrX_11_14205001 chrX_14205001 RAL-907 2530 chrX 14395093 14395119 chrX 14395212 14395238 8 119 5.5 3.0 4.2 1.5 145 chrX 14395093 intron dpr8 + chrX 14395166 intron dpr8 + chrX 14395238 intron dpr8 + chrX_8_14395001 chrX_14395001 RAL-907 2531 chrX 14401529 14401574 chrX 14401658 14401702 9 128 1.5 1.5 1.5 3.6 173 chrX 14401529 intron dpr8 + chrX 14401616 intron dpr8 + chrX 14401702 intron dpr8 + chrX_9_14400001 chrX_14400001 RAL-907 2532 chrX 14407246 14407299 chrX 14407348 14407401 16 99 0.0 2.0 1.0 8.0 155 chrX 14407246 intron dpr8 + chrX 14407324 intron dpr8 + chrX 14407401 intron dpr8 + chrX_16_14405001 chrX_14405001 RAL-907 2533 chrX 14416295 14416315 chrX 14421083 14421103 F-element 5 4788 3.5 2.5 3.0 1.2 4808 chrX 14416295 intron dpr8 + chrX 14418699 intron dpr8 + chrX 14421103 intron dpr8 + chrX_5_14415001 chrX_14415001 RAL-907 2534 chrX 14480559 14480590 chrX 14480649 14480687 8 93 2.0 3.5 2.8 2.1 128 chrX 14480559 intergenic CG9411 - chrX 14480623 intergenic not near genes chrX 14480687 intergenic not near genes chrX_8_14480001 chrX_14480001 RAL-907 2535 chrX 14484948 14484986 chrX 14485057 14485095 7 107 0.0 3.0 1.5 2.8 147 chrX 14484948 intergenic not near genes chrX 14485022 intergenic not near genes chrX 14485095 intergenic not near genes chrX_7_14485001 chrX_14485001 RAL-907 2536 chrX 14636471 14636488 chrX 14641904 14641948 I-element 4 5452 1.5 5.5 3.5 0.9 5477 chrX 14636471 intron NetA - chrX 14639210 intron NetA - chrX 14641948 intron NetA - chrX_4_14635001 chrX_14635001 RAL-907 2537 chrX 14714044 14714062 chrX 14714146 14714164 8 102 3.0 7.0 5.0 1.3 120 chrX 14714044 intron NetB - chrX 14714104 intron NetB - chrX 14714164 intron NetB - chrX_8_14710001 chrX_14710001 RAL-907 2538 chrX 14778023 14778041 chrX 14782835 14782858 Doc 6 4816 7.0 3.5 5.2 1.0 4835 chrX 14778023 intergenic CG5347 + chrX 14780440 intergenic not near genes chrX 14782858 intergenic Ag5r2 - chrX_6_14780001 chrX_14780001 RAL-907 2539 chrX 14778042 14778045 chrX 14782827 14782862 Doc 4 4809 7.0 3.0 5.0 0.7 4820 chrX 14778042 intergenic CG5347 + chrX 14780452 intergenic not near genes chrX 14782862 intergenic Ag5r2 - chrX_4_14780001 chrX_14780001 RAL-907 2540 chrX 14813715 14813757 chrX 14813813 14813855 17 98 2.5 1.0 1.8 6.1 140 chrX 14813715 intron rut - chrX 14813785 intron rut - chrX 14813855 intron rut - chrX_17_14810001 chrX_14810001 RAL-907 2541 chrX 14883576 14883618 chrX 14883672 14883714 14 96 5.5 0.0 2.8 3.7 138 chrX 14883576 intron Flo2 + chrX 14883645 intron Flo2 + chrX 14883714 intron Flo2 + chrX_14_14880001 chrX_14880001 RAL-907 2542 chrX 14888931 14888975 chrX 14889037 14889081 9 106 2.5 4.0 3.2 2.1 150 chrX 14888931 intron,intron Flo2 +,CG9514 - chrX 14889006 intron,intron Flo2 +,CG9514 - chrX 14889081 intron,intron Flo2 +,CG9514 - chrX_9_14885001 chrX_14885001 RAL-907 2543 chrX 14900832 14900878 chrX 14901044 14901068 10 208 6.5 6.5 6.5 1.3 236 chrX 14900832 intron Flo2 + chrX 14900950 intron Flo2 + chrX 14901068 intron Flo2 + chrX_10_14900001 chrX_14900001 RAL-907 2544 chrX 14936842 14936886 chrX 14946119 14946163 roo 14 9277 6.0 2.0 4.0 2.8 9321 chrX 14936842 intron pdgy - chrX 14941502 intron pdgy - chrX 14946163 intron pdgy - chrX_14_14940001 chrX_14940001 RAL-907 2545 chrX 14981711 14981739 chrX 14981810 14981838 6 99 1.5 5.0 3.2 1.4 127 chrX 14981711 intron eag + chrX 14981774 intron eag + chrX 14981838 intron eag + chrX_6_14980001 chrX_14980001 RAL-907 2546 chrX 14991758 14991804 chrX 14991856 14991902 8 96 4.5 4.5 4.5 1.5 144 chrX 14991758 intron eag + chrX 14991830 intron eag + chrX 14991902 intron eag + chrX_8_14990001 chrX_14990001 RAL-907 2547 chrX 15059154 15059205 chrX 15059280 15059331 4 124 0.5 2.5 1.5 1.6 177 chrX 15059154 exon hiw - chrX 15059242 intron hiw - chrX 15059331 intron hiw - chrX_4_15055001 chrX_15055001 RAL-907 2548 chrX 15127226 15127236 chrX 15127332 15127348 5 111 2.0 5.0 3.5 1.1 122 chrX 15127226 intron drd + chrX 15127287 intron drd + chrX 15127348 intron drd + chrX_5_15125001 chrX_15125001 RAL-907 2549 chrX 15149507 15149548 chrX 15149605 15149646 10 98 2.0 4.0 3.0 2.5 139 chrX 15149507 intron CG9095 - chrX 15149576 intron CG9095 - chrX 15149646 intron CG9095 - chrX_10_15145001 chrX_15145001 RAL-907 2550 chrX 15168722 15168763 chrX 15168830 15168872 16 106 4.0 1.0 2.5 4.6 150 chrX 15168722 intergenic not near genes chrX 15168797 intergenic not near genes chrX 15168872 intergenic not near genes chrX_16_15165001 chrX_15165001 RAL-907 2551 chrX 15200622 15200639 chrX 15200718 15200725 6 93 1.5 4.5 3.0 1.5 103 chrX 15200622 intergenic not near genes chrX 15200674 intergenic not near genes chrX 15200725 intergenic not near genes chrX_6_15200001 chrX_15200001 RAL-907 2552 chrX 15248252 15248287 chrX 15248348 15248383 12 95 0.0 4.5 2.2 3.8 131 chrX 15248252 intergenic not near genes chrX 15248318 intergenic not near genes chrX 15248383 intergenic not near genes chrX_12_15245001 chrX_15245001 RAL-907 2553 chrX 15413047 15413086 chrX 15417350 15417369 Juan 7 4302 4.5 3.0 3.8 1.5 4322 chrX 15413047 intron Cngl - chrX 15415208 intron Cngl - chrX 15417369 intron Cngl - chrX_7_15415001 chrX_15415001 RAL-907 2554 chrX 15419418 15419447 chrX 15419517 15419565 4 110 1.5 1.5 1.5 1.6 147 chrX 15419418 intron Cngl - chrX 15419492 intron Cngl - chrX 15419565 intron Cngl - chrX_4_15415001 chrX_15415001 RAL-907 2555 chrX 15421902 15421949 chrX 15423432 15423468 pogo 11 1530 0.5 4.0 2.2 3.4 1566 chrX 15421902 intron Cngl - chrX 15422685 intron Cngl - chrX 15423468 intron Cngl - chrX_11_15420001 chrX_15420001 RAL-907 2556 chrX 15435692 15435703 chrX 15436133 15436145 rover 5 448 1.0 5.0 3.0 1.2 453 chrX 15435692 intron Cngl - chrX 15435918 intron Cngl - chrX 15436145 intron Cngl - chrX_5_15435001 chrX_15435001 RAL-907 2557 chrX 15519780 15519831 chrX 15519877 15519929 9 92 0.0 1.5 0.8 5.0 149 chrX 15519780 intron Ac13E - chrX 15519854 intron Ac13E - chrX 15519929 exon Ac13E - chrX_9_15515001 chrX_15515001 RAL-907 2558 chrX 15818758 15818807 chrX 15818854 15818893 14 91 3.0 2.5 2.8 3.7 135 chrX 15818758 intron sd + chrX 15818826 intron sd + chrX 15818893 intron sd + chrX_14_15815001 chrX_15815001 RAL-907 2559 chrX 15891818 15891850 chrX 15891916 15891948 6 98 2.5 2.0 2.2 1.9 130 chrX 15891818 intergenic CG15916 +,shi + chrX 15891883 intergenic shi +,CG15916 + chrX 15891948 intergenic shi +,CG15916 + chrX_6_15890001 chrX_15890001 RAL-907 2560 chrX 15952209 15952248 chrX 15952310 15952349 10 98 3.0 2.5 2.8 2.6 140 chrX 15952209 intron mmd - chrX 15952279 intron mmd - chrX 15952349 intron mmd - chrX_10_15950001 chrX_15950001 RAL-907 2561 chrX 16100538 16100590 chrX 16100637 16100690 6 98 1.5 1.0 1.2 2.7 152 chrX 16100538 intron,intron CG42353 -,CG42354 - chrX 16100614 intron,intron CG42353 -,CG42354 - chrX 16100690 intron,intron CG42353 -,CG42354 - chrX_6_16100001 chrX_16100001 RAL-907 2562 chrX 16160286 16160297 chrX 16160381 16160393 4 96 6.0 6.5 6.2 0.6 107 chrX 16160286 intergenic not near genes chrX 16160340 intergenic not near genes chrX 16160393 intergenic not near genes chrX_4_16160001 chrX_16160001 RAL-907 2563 chrX 16199755 16199791 chrX 16199924 16199960 7 170 23.5 23.5 23.5 0.3 205 chrX 16199755 intergenic not near genes chrX 16199858 intergenic not near genes chrX 16199960 intergenic not near genes chrX_7_16195001 chrX_16195001 RAL-907 2564 chrX 16218598 16218620 chrX 16218917 16218956 5 328 2.5 4.0 3.2 1.2 358 chrX 16218598 intergenic not near genes chrX 16218777 intergenic not near genes chrX 16218956 intergenic not near genes chrX_5_16215001 chrX_16215001 RAL-907 2565 chrX 16222760 16222807 chrX 16231130 16231177 roo 18 8369 0.5 2.5 1.5 7.2 8417 chrX 16222760 intergenic not near genes chrX 16226968 intergenic not near genes chrX 16231177 intergenic not near genes chrX_18_16225001 chrX_16225001 RAL-907 2566 chrX 16492629 16492678 chrX 16498225 16498275 mdg3 20 5597 6.0 4.0 5.0 3.3 5646 chrX 16492629 intron para - chrX 16495452 intron para - chrX 16498275 exon para - chrX_20_16495001 chrX_16495001 RAL-907 2567 chrX 16623466 16623483 chrX 16623572 16623578 6 104 3.0 0.0 1.5 2.4 112 chrX 16623466 intergenic not near genes chrX 16623522 intergenic Rok - chrX 16623578 intergenic Rok - chrX_6_16620001 chrX_16620001 RAL-907 2568 chrX 16677313 16677339 chrX 16677468 16677494 8 155 0.0 1.5 0.8 4.4 181 chrX 16677313 intergenic not near genes chrX 16677404 intergenic not near genes chrX 16677494 intergenic not near genes chrX_8_16675001 chrX_16675001 RAL-907 2569 chrX 16689608 16689653 chrX 16689714 16689729 12 96 1.0 1.0 1.0 6.0 121 chrX 16689608 intron Sep4 - chrX 16689668 intron Sep4 - chrX 16689729 intron Sep4 - chrX_12_16685001 chrX_16685001 RAL-907 2570 chrX 16690117 16690131 chrX 16690222 16690236 5 105 4.0 1.0 2.5 1.4 119 chrX 16690117 intron Sep4 - chrX 16690176 intron Sep4 - chrX 16690236 intron Sep4 - chrX_5_16690001 chrX_16690001 RAL-907 2571 chrX 16799741 16799782 chrX 16799850 16799891 19 109 2.5 4.5 3.5 4.2 150 chrX 16799741 intron CG9132 - chrX 16799816 intron CG9132 - chrX 16799891 intron CG9132 - chrX_19_16795001 chrX_16795001 RAL-907 2572 chrX 16821215 16821260 chrX 16821315 16821361 5 101 7.0 0.0 3.5 1.1 146 chrX 16821215 intron CG4829 + chrX 16821288 intron CG4829 + chrX 16821361 intron CG4829 + chrX_5_16820001 chrX_16820001 RAL-907 2573 chrX 16936000 16936028 chrX 16936430 16936456 jockey 4 430 4.0 3.0 3.5 0.9 456 chrX 16936000 intron CG4928 + chrX 16936228 intron CG4928 + chrX 16936456 intron CG4928 + chrX_4_16935001 chrX_16935001 RAL-907 2574 chrX 16965511 16965563 chrX 16965626 16965678 15 113 5.0 1.5 3.2 3.6 167 chrX 16965511 intron CG9086 - chrX 16965594 intron CG9086 - chrX 16965678 intron CG9086 - chrX_15_16965001 chrX_16965001 RAL-907 2575 chrX 17057918 17057959 chrX 17058179 17058220 pogo 9 261 5.5 3.0 4.2 1.7 302 chrX 17057918 intron CG45002 - chrX 17058069 intron CG45002 - chrX 17058220 intron CG45002 - chrX_9_17055001 chrX_17055001 RAL-907 2576 chrX 17111210 17111247 chrX 17111352 17111389 20 141 5.0 2.5 3.8 4.2 179 chrX 17111210 intron CG5004 + chrX 17111300 intron CG5004 + chrX 17111389 intron CG5004 + chrX_20_17110001 chrX_17110001 RAL-907 2577 chrX 17195204 17195234 chrX 17200296 17200330 flea 4 5100 0.0 2.0 1.0 2.0 5126 chrX 17195204 3` UTR baz + chrX 17197767 3` UTR baz + chrX 17200330 3` UTR baz + chrX_4_17195001 chrX_17195001 RAL-907 2578 chrX 17205828 17205855 chrX 17205938 17205965 17 110 2.5 3.0 2.8 4.5 137 chrX 17205828 intergenic not near genes chrX 17205896 intergenic not near genes chrX 17205965 intergenic CG32564 + chrX_17_17205001 chrX_17205001 RAL-907 2579 chrX 17303590 17303603 chrX 17303686 17303699 4 96 8.0 6.0 7.0 0.5 109 chrX 17303590 intron CG5445 + chrX 17303644 intron CG5445 + chrX 17303699 intron CG5445 + chrX_4_17300001 chrX_17300001 RAL-907 2580 chrX 17332499 17332511 chrX 17332596 17332608 5 97 4.0 4.5 4.2 1.0 109 chrX 17332499 intergenic not near genes chrX 17332554 intergenic not near genes chrX 17332608 intergenic not near genes chrX_5_17330001 chrX_17330001 RAL-907 2581 chrX 17352578 17352621 chrX 17352692 17352744 10 118 0.0 3.5 1.8 3.6 166 chrX 17352578 intergenic not near genes chrX 17352661 intergenic not near genes chrX 17352744 intergenic not near genes chrX_10_17350001 chrX_17350001 RAL-907 2582 chrX 17476474 17476485 chrX 17476535 17476547 7 77 3.5 0.0 1.8 2.5 73 chrX 17476474 intron CG43658 - chrX 17476510 intron CG43658 - chrX 17476547 intron CG43658 - chrX_7_17475001 chrX_17475001 RAL-907 2583 chrX 17680888 17680902 chrX 17680970 17680999 5 92 7.5 4.5 6.0 0.7 111 chrX 17680888 intron chas - chrX 17680944 intron chas - chrX 17680999 intron chas - chrX_5_17680001 chrX_17680001 RAL-907 2584 chrX 17680903 17680923 chrX 17680966 17681019 4 88 2.5 3.0 2.8 1.1 116 chrX 17680903 intron chas - chrX 17680961 intron chas - chrX 17681019 intron chas - chrX_4_17680001 chrX_17680001 RAL-907 2585 chrX 17685458 17685469 chrX 17685561 17685571 5 103 1.5 7.0 4.2 1.0 113 chrX 17685458 intron chas - chrX 17685514 intron chas - chrX 17685571 intron chas - chrX_5_17685001 chrX_17685001 RAL-907 2586 chrX 17784466 17784478 chrX 17784562 17784574 7 96 0.0 2.0 1.0 3.5 108 chrX 17784466 intergenic not near genes chrX 17784520 intergenic not near genes chrX 17784574 intergenic not near genes chrX_7_17780001 chrX_17780001 RAL-907 2587 chrX 17958918 17958961 chrX 17959180 17959223 10 261 3.5 4.5 4.0 2.0 305 chrX 17958918 intron Sh - chrX 17959070 intron Sh - chrX 17959223 intron Sh - chrX_10_17955001 chrX_17955001 RAL-907 2588 chrX 17968894 17968922 chrX 17969032 17969060 7 138 3.5 6.5 5.0 1.2 166 chrX 17968894 intron Sh - chrX 17968977 intron Sh - chrX 17969060 intron Sh - chrX_7_17965001 chrX_17965001 RAL-907 2589 chrX 18029171 18029182 chrX 18029272 18029283 5 100 2.5 0.0 1.2 2.3 112 chrX 18029171 intron Sh - chrX 18029227 intron Sh - chrX 18029283 intron Sh - chrX_5_18025001 chrX_18025001 RAL-907 2590 chrX 18040412 18040460 chrX 18040520 18040568 18 107 1.5 4.5 3.0 4.5 156 chrX 18040412 intron Sh - chrX 18040490 intron Sh - chrX 18040568 intron Sh - chrX_18_18040001 chrX_18040001 RAL-907 2591 chrX 18126580 18126833 chrX 18126723 18126923 23 129 1.0 1.5 1.2 10.5 343 chrX 18126580 intron CG32553 - chrX 18126752 intron CG32553 - chrX 18126923 intron CG32553 - chrX_23_18125001 chrX_18125001 RAL-907 2592 chrX 18256470 18256480 chrX 18256612 18256622 6 142 0.0 0.0 0.0 6.0 152 chrX 18256470 intergenic CR45613 - chrX 18256546 intergenic CR45613 - chrX 18256622 3` UTR CR45613 - chrX_6_18255001 chrX_18255001 RAL-907 2593 chrX 18429480 18429514 chrX 18434808 18434844 Transpac 8 5330 4.5 9.0 6.8 1.0 5364 chrX 18429480 intergenic not near genes chrX 18432162 intergenic not near genes chrX 18434844 intergenic not near genes chrX_8_18430001 chrX_18430001 RAL-907 2594 chrX 18440892 18440941 chrX 18440990 18441039 18 98 4.0 6.0 5.0 3.0 147 chrX 18440892 intergenic CG32548 - chrX 18440966 intergenic CG32548 - chrX 18441039 intergenic CG32548 - chrX_18_18440001 chrX_18440001 RAL-907 2595 chrX 18453537 18453564 chrX 18453897 18453931 8 365 1.5 1.5 1.5 3.2 394 chrX 18453537 intron CG32547 - chrX 18453734 intron CG32547 - chrX 18453931 intron CG32547 - chrX_8_18450001 chrX_18450001 RAL-907 2596 chrX 18529380 18529398 chrX 18529476 18529494 10 95 3.0 3.5 3.2 2.4 114 chrX 18529380 intron,3` UTR Bx +,CG15047 + chrX 18529437 intron,3` UTR Bx +,CG15047 + chrX 18529494 intron,3` UTR Bx +,CG15047 + chrX_10_18525001 chrX_18525001 RAL-907 2597 chrX 18558763 18558805 chrX 18558865 18558895 16 101 1.5 5.5 3.5 3.6 132 chrX 18558763 intron Bx + chrX 18558829 intron Bx + chrX 18558895 intron Bx + chrX_16_18555001 chrX_18555001 RAL-907 2598 chrX 18644994 18645040 chrX 18645112 18645158 13 118 7.0 3.0 5.0 2.2 164 chrX 18644994 intron Rip11 - chrX 18645076 intron Rip11 - chrX 18645158 intron Rip11 - chrX_13_18645001 chrX_18645001 RAL-907 2599 chrX 18698836 18698877 chrX 18698965 18699014 9 136 2.0 4.5 3.2 2.1 178 chrX 18698836 intergenic not near genes chrX 18698925 intergenic not near genes chrX 18699014 intergenic not near genes chrX_9_18695001 chrX_18695001 RAL-907 2600 chrX 18896498 18896548 chrX 18896629 18896679 13 130 2.0 5.5 3.8 2.7 181 chrX 18896498 3` UTR CG7349 + chrX 18896588 intergenic CG7349 + chrX 18896679 intergenic CG7349 + chrX_13_18895001 chrX_18895001 RAL-907 2601 chrX 18947484 18947531 chrX 18947597 18947644 10 111 3.0 3.5 3.2 2.4 160 chrX 18947484 intron CG43759 + chrX 18947564 intron CG43759 + chrX 18947644 intron CG43759 + chrX_10_18945001 chrX_18945001 RAL-907 2602 chrX 18957055 18957065 chrX 18965731 18965741 roo 4 8676 3.0 0.0 1.5 1.6 8686 chrX 18957055 intron CG43759 + chrX 18961398 intron CG43759 + chrX 18965741 intron CG43759 + chrX_4_18960001 chrX_18960001 RAL-907 2603 chrX 19020574 19020620 chrX 19020672 19020718 11 96 2.0 5.0 3.5 2.4 144 chrX 19020574 intron CG43759 + chrX 19020646 intron CG43759 + chrX 19020718 intron CG43759 + chrX_11_19020001 chrX_19020001 RAL-907 2604 chrX 19060392 19060435 chrX 19065196 19065239 Doc 7 4804 3.5 4.0 3.8 1.5 4847 chrX 19060392 intron CG14190 + chrX 19062816 intron CG14190 + chrX 19065239 intron CG14190 + chrX_7_19060001 chrX_19060001 RAL-907 2605 chrX 19097515 19097548 chrX 19097603 19097637 9 92 5.0 1.5 3.2 2.1 122 chrX 19097515 intergenic not near genes chrX 19097576 intergenic not near genes chrX 19097637 intergenic not near genes chrX_9_19095001 chrX_19095001 RAL-907 2606 chrX 19098753 19098782 chrX 19098851 19098880 11 96 1.5 3.5 2.5 3.1 127 chrX 19098753 intergenic not near genes chrX 19098816 intergenic not near genes chrX 19098880 intergenic not near genes chrX_11_19095001 chrX_19095001 RAL-907 2607 chrX 19120380 19120392 chrX 19120488 19120500 4 110 8.0 1.5 4.8 0.7 120 chrX 19120380 intergenic not near genes chrX 19120440 intergenic not near genes chrX 19120500 intergenic not near genes chrX_4_19120001 chrX_19120001 RAL-907 2608 chrX 19339737 19339771 chrX 19339833 19339867 10 96 0.0 3.5 1.8 3.6 130 chrX 19339737 intron nAChRalpha7 - chrX 19339802 intron nAChRalpha7 - chrX 19339867 intron nAChRalpha7 - chrX_10_19335001 chrX_19335001 RAL-907 2609 chrX 19380138 19380183 chrX 19380399 19380444 pogo 11 259 3.5 3.5 3.5 2.4 306 chrX 19380138 intron kek5 + chrX 19380291 intron kek5 + chrX 19380444 intron kek5 + chrX_11_19380001 chrX_19380001 RAL-907 2610 chrX 19472107 19472159 chrX 19472697 19472700 jockey 7 582 2.0 2.5 2.2 2.2 593 chrX 19472107 intergenic kek5 + chrX 19472404 intergenic kek5 + chrX 19472700 intergenic not near genes chrX_7_19470001 chrX_19470001 RAL-907 2611 chrX 19710059 19710096 chrX 19711862 19711902 S-element 11 1803 1.5 9.5 5.5 1.7 1843 chrX 19710059 intron meso18E - chrX 19710980 intron meso18E - chrX 19711902 intron meso18E - chrX_11_19710001 chrX_19710001 RAL-907 2612 chrX 19881452 19881481 chrX 19881537 19881582 14 95 5.5 3.0 4.2 2.7 130 chrX 19881452 intron Hers + chrX 19881517 intron Hers + chrX 19881582 intron Hers + chrX_14_19880001 chrX_19880001 RAL-907 2613 chrX 19897364 19897414 chrX 19897461 19897511 15 96 6.0 5.0 5.5 2.3 147 chrX 19897364 intron Hers + chrX 19897438 intron Hers + chrX 19897511 intron Hers + chrX_15_19895001 chrX_19895001 RAL-907 2614 chrX 19962579 19962617 chrX 19962738 19962787 10 158 4.0 3.0 3.5 2.2 208 chrX 19962579 intron Nep3 + chrX 19962683 intron Nep3 + chrX 19962787 intron Nep3 + chrX_10_19960001 chrX_19960001 RAL-907 2615 chrX 19983410 19983521 chrX 19983515 19983700 6 129 1.0 1.0 1.0 3.0 290 chrX 19983410 intergenic not near genes chrX 19983555 intergenic not near genes chrX 19983700 intergenic not near genes chrX_6_19980001 chrX_19980001 RAL-907 2616 chrX 20041520 20041563 chrX 20041611 20041663 15 97 3.0 3.0 3.0 3.8 143 chrX 20041520 intron Dop2R - chrX 20041592 intron Dop2R - chrX 20041663 intron Dop2R - chrX_15_20040001 chrX_20040001 RAL-907 2617 chrX 20144292 20144312 chrX 20144392 20144412 6 99 1.5 6.0 3.8 1.2 120 chrX 20144292 intergenic not near genes chrX 20144352 intergenic not near genes chrX 20144412 intergenic not near genes chrX_6_20140001 chrX_20140001 RAL-907 2618 chrX 20257746 20257778 chrX 20257852 20257884 12 105 3.5 6.5 5.0 2.0 138 chrX 20257746 intergenic not near genes chrX 20257815 intergenic not near genes chrX 20257884 intergenic not near genes chrX_12_20255001 chrX_20255001 RAL-907 2619 chrX 20279733 20279774 chrX 20279834 20279875 17 101 3.5 5.5 4.5 3.1 142 chrX 20279733 intergenic not near genes chrX 20279804 intergenic not near genes chrX 20279875 intergenic not near genes chrX_17_20275001 chrX_20275001 RAL-907 2620 chrX 20312872 20312905 chrX 20312961 20313003 10 95 2.0 4.0 3.0 2.5 131 chrX 20312872 intron CG1504 - chrX 20312938 intron CG1504 - chrX 20313003 intron CG1504 - chrX_10_20310001 chrX_20310001 RAL-907 2621 chrX 20371554 20371563 chrX 20371652 20371661 4 98 1.0 1.5 1.2 1.8 107 chrX 20371554 intergenic not near genes chrX 20371608 intergenic not near genes chrX 20371661 intergenic not near genes chrX_4_20370001 chrX_20370001 RAL-907 2622 chrX 20443163 20443204 chrX 20443259 20443300 7 96 4.0 4.0 4.0 1.4 137 chrX 20443163 exon CG1695 + chrX 20443232 intron CG1695 + chrX 20443300 intron CG1695 + chrX_7_20440001 chrX_20440001 RAL-907 2623 chrX 20467994 20468036 chrX 20468103 20468134 6 107 6.0 0.0 3.0 1.5 140 chrX 20467994 intron GstT3 + chrX 20468064 intron GstT3 + chrX 20468134 intron GstT3 + chrX_6_20465001 chrX_20465001 RAL-907 2624 chrX 20484373 20484403 chrX 20484498 20484528 4 125 5.0 5.5 5.2 0.6 155 chrX 20484373 intron RhoGAP19D - chrX 20484450 intron RhoGAP19D - chrX 20484528 intron RhoGAP19D - chrX_4_20480001 chrX_20480001 RAL-907 2625 chrX 20493910 20493929 chrX 20494091 20494109 5 181 0.0 5.5 2.8 1.3 199 chrX 20493910 intron RhoGAP19D - chrX 20494010 intron RhoGAP19D - chrX 20494109 intron RhoGAP19D - chrX_5_20490001 chrX_20490001 RAL-907 2626 chrX 20499155 20499167 chrX 20499238 20499258 5 89 4.0 2.5 3.2 1.2 103 chrX 20499155 intron RhoGAP19D - chrX 20499206 intron RhoGAP19D - chrX 20499258 intron RhoGAP19D - chrX_5_20495001 chrX_20495001 RAL-907 2627 chrX 20499171 20499183 chrX 20499237 20499240 4 72 1.5 2.5 2.0 1.3 69 chrX 20499171 intron RhoGAP19D - chrX 20499206 intron RhoGAP19D - chrX 20499240 intron RhoGAP19D - chrX_4_20495001 chrX_20495001 RAL-907 2628 chrX 20504108 20504158 chrX 20505649 20505676 transib2 10 1535 7.5 1.5 4.5 1.8 1568 chrX 20504108 intron RhoGAP19D - chrX 20504892 intron RhoGAP19D - chrX 20505676 intron RhoGAP19D - chrX_10_20500001 chrX_20500001 RAL-907 2629 chrX 20517226 20517254 chrX 20517332 20517339 8 103 5.5 2.0 3.8 1.7 113 chrX 20517226 intron Tak1 - chrX 20517282 intron Tak1 - chrX 20517339 intron Tak1 - chrX_8_20515001 chrX_20515001 RAL-907 2630 chrX 20526455 20526472 chrX 20526591 20526595 4 130 1.0 0.0 0.5 2.7 140 chrX 20526455 intergenic not near genes chrX 20526525 intergenic not near genes chrX 20526595 intergenic not near genes chrX_4_20525001 chrX_20525001 RAL-907 2631 chrX 20531677 20531713 chrX 20531787 20531815 4 106 0.0 6.0 3.0 1.0 138 chrX 20531677 intergenic not near genes chrX 20531746 intergenic not near genes chrX 20531815 intergenic not near genes chrX_4_20530001 chrX_20530001 RAL-907 2632 chrX 20546536 20546568 chrX 20546722 20546754 8 184 1.0 3.0 2.0 2.7 218 chrX 20546536 intron RunxB + chrX 20546645 intron RunxB + chrX 20546754 intron RunxB + chrX_8_20545001 chrX_20545001 RAL-907 2633 chrX 20558634 20558670 chrX 20558734 20558751 4 94 3.5 2.5 3.0 1.0 117 chrX 20558634 intron RunxB + chrX 20558692 intron RunxB + chrX 20558751 intron RunxB + chrX_4_20555001 chrX_20555001 RAL-907 2634 chrX 20559121 20559162 chrX 20559219 20559270 6 105 0.0 3.0 1.5 2.4 149 chrX 20559121 intron RunxB + chrX 20559196 intron RunxB + chrX 20559270 intron RunxB + chrX_6_20555001 chrX_20555001 RAL-907 2635 chrX 20635413 20635443 chrX 20635599 20635625 7 185 1.5 4.0 2.8 1.8 212 chrX 20635413 intergenic not near genes chrX 20635519 intergenic not near genes chrX 20635625 intergenic not near genes chrX_7_20635001 chrX_20635001 RAL-907 2636 chrX 20710411 20710441 chrX 20710503 20710539 5 97 0.5 4.5 2.5 1.4 128 chrX 20710411 intergenic not near genes chrX 20710475 intergenic not near genes chrX 20710539 intergenic not near genes chrX_5_20710001 chrX_20710001 RAL-907 2637 chrX 20719195 20719201 chrX 20719548 20719554 4 353 2.0 6.5 4.2 0.8 359 chrX 20719195 intergenic not near genes chrX 20719374 intergenic not near genes chrX 20719554 intergenic not near genes chrX_4_20715001 chrX_20715001 RAL-907 2638 chrX 20774557 20774593 chrX 20774644 20774686 10 89 3.5 0.5 2.0 3.3 129 chrX 20774557 intron shakB - chrX 20774622 intron shakB - chrX 20774686 intron shakB - chrX_10_20770001 chrX_20770001 RAL-907 2639 chrX 20836720 20836753 chrX 20844342 20844374 roo 8 7621 1.0 3.5 2.2 2.5 7654 chrX 20836720 intron shakB - chrX 20840547 intron shakB - chrX 20844374 intron shakB - chrX_8_20840001 chrX_20840001 RAL-907 2640 chrX 20940727 20940752 chrX 20942185 20942218 hobo 8 1478 3.5 2.5 3.0 2.0 1491 chrX 20940727 intergenic not near genes chrX 20941472 intergenic not near genes chrX 20942218 intergenic not near genes chrX_8_20940001 chrX_20940001 RAL-907 2641 chrX 21020070 21020118 chrX 21020183 21020185 11 109 2.5 0.0 1.2 5.0 115 chrX 21020070 intergenic not near genes chrX 21020128 intergenic not near genes chrX 21020185 intergenic not near genes chrX_11_21020001 chrX_21020001 RAL-907 2642 chrX 21029794 21029811 chrX 21029940 21029972 4 157 1.5 1.0 1.2 1.8 178 chrX 21029794 3` UTR CG1529 - chrX 21029883 3` UTR CG1529 - chrX 21029972 3` UTR CG1529 - chrX_4_21025001 chrX_21025001 RAL-907 2643 chrX 21061844 21061895 chrX 21062349 21062400 roo 22 504 6.5 2.5 4.5 4.0 556 chrX 21061844 intron bves + chrX 21062122 intron bves + chrX 21062400 intron,3` UTR bves +,CG32512 - chrX_22_21060001 chrX_21060001 RAL-907 2644 chrX 21086111 21086164 chrX 21087157 21087174 jockey 7 1034 0.0 3.5 1.8 2.5 1063 chrX 21086111 intergenic not near genes chrX 21086642 intergenic not near genes chrX 21087174 intergenic not near genes chrX_7_21085001 chrX_21085001 RAL-907 2645 chrX 21166121 21166163 chrX 21166219 21166264 11 98 2.5 1.5 2.0 3.7 143 chrX 21166121 intergenic not near genes chrX 21166192 intergenic not near genes chrX 21166264 intergenic not near genes chrX_11_21165001 chrX_21165001 RAL-907 2646 chrX 21197038 21197088 chrX 21197135 21197186 12 95 1.5 4.5 3.0 3.0 148 chrX 21197038 intergenic not near genes chrX 21197112 intergenic not near genes chrX 21197186 intergenic not near genes chrX_12_21195001 chrX_21195001 RAL-907 2647 chrX 21264717 21264755 chrX 21264813 21264851 11 92 3.5 4.5 4.0 2.2 134 chrX 21264717 intron CG32521 - chrX 21264784 intron CG32521 - chrX 21264851 intron CG32521 - chrX_11_21260001 chrX_21260001 RAL-907 2648 chrX 21268048 21268084 chrX 21268149 21268175 4 92 3.5 2.0 2.8 1.1 127 chrX 21268048 intron CG32521 - chrX 21268112 intron CG32521 - chrX 21268175 intron CG32521 - chrX_4_21265001 chrX_21265001 RAL-907 2649 chrX 21328106 21328146 chrX 21328236 21328277 8 131 3.5 3.0 3.2 1.9 171 chrX 21328106 3` UTR CG1486 + chrX 21328192 intergenic CG1486 +,tty - chrX 21328277 intergenic CG1486 +,tty - chrX_8_21325001 chrX_21325001 RAL-907 2650 chrX 21410465 21410485 chrX 21410568 21410588 9 102 3.0 0.0 1.5 3.6 123 chrX 21410465 3` UTR CR45003 - chrX 21410526 3` UTR CR45003 - chrX 21410588 intergenic CR45003 - chrX_9_21410001 chrX_21410001 RAL-907 2651 chrX 21419191 21419235 chrX 21419296 21419340 7 105 2.5 0.5 1.5 2.8 149 chrX 21419191 intergenic not near genes chrX 21419266 intergenic not near genes chrX 21419340 intergenic not near genes chrX_7_21415001 chrX_21415001 RAL-907 2652 chrX 21428332 21428368 chrX 21428527 21428538 5 183 2.0 1.5 1.8 1.8 206 chrX 21428332 intron CG42343 - chrX 21428435 intron CG42343 - chrX 21428538 intron CG42343 - chrX_5_21425001 chrX_21425001 RAL-907 2653 chrX 21454848 21454872 chrX 21454949 21454976 6 103 2.0 1.0 1.5 2.4 128 chrX 21454848 intron CG42343 - chrX 21454912 intron CG42343 - chrX 21454976 intron CG42343 - chrX_6_21450001 chrX_21450001 RAL-907 2654 chrX 21458675 21458721 chrX 21464127 21464172 Ivk 9 5454 3.5 2.5 3.0 2.2 5497 chrX 21458675 intergenic not near genes chrX 21461424 intergenic not near genes chrX 21464172 intergenic not near genes chrX_9_21460001 chrX_21460001 RAL-907 2655 chrX 21466996 21467042 chrX 21467100 21467145 8 104 1.0 2.0 1.5 3.2 149 chrX 21466996 intergenic CR45507 - chrX 21467070 intergenic CR45507 - chrX 21467145 3` UTR CR45507 - chrX_8_21465001 chrX_21465001 RAL-907 2656 chrX 21509991 21510007 chrX 21510100 21510116 4 108 0.5 7.0 3.8 0.8 125 chrX 21509991 intron CR45082 - chrX 21510054 intron CR45082 - chrX 21510116 intron CR45082 - chrX_4_21510001 chrX_21510001 RAL-907 2657 chrX 21565394 21565441 chrX 21565492 21565539 7 97 2.0 1.0 1.5 2.8 145 chrX 21565394 intergenic not near genes chrX 21565466 intergenic not near genes chrX 21565539 intergenic not near genes chrX_7_21565001 chrX_21565001 RAL-907 2658 chrX 21575523 21575558 chrX 21575622 21575647 9 94 4.0 4.0 4.0 1.8 124 chrX 21575523 intergenic not near genes chrX 21575585 intergenic not near genes chrX 21575647 intergenic not near genes chrX_9_21575001 chrX_21575001 RAL-907 2659 chrX 21624899 21624943 chrX 21625004 21625042 7 107 1.5 1.5 1.5 2.8 143 chrX 21624899 3` UTR DIP1 - chrX 21624970 3` UTR DIP1 - chrX 21625042 3` UTR DIP1 - chrX_7_21620001 chrX_21620001 RAL-907 2660 chrX 21668238 21668261 chrX 21668343 21668366 8 102 6.5 0.5 3.5 1.8 128 chrX 21668238 intergenic not near genes chrX 21668302 intergenic not near genes chrX 21668366 intergenic not near genes chrX_8_21665001 chrX_21665001 RAL-907 2661 chrX 21668273 21668286 chrX 21668341 21668391 4 89 3.0 0.5 1.8 1.4 118 chrX 21668273 intergenic not near genes chrX 21668332 intergenic not near genes chrX 21668391 intergenic not near genes chrX_4_21665001 chrX_21665001 RAL-907 2662 chrX 22448249 22448294 chrX 22448408 22448453 7 158 4.5 3.0 3.8 1.5 204 chrX 22448249 intron CG14615 - chrX 22448351 intron CG14615 - chrX 22448453 intron CG14615 - chrX_7_22445001 chrX_22445001 RAL-907 2663 chrX 22478875 22478898 chrX 22479028 22479051 13 152 0.0 0.0 0.0 13.0 176 chrX 22478875 intron CG12576 - chrX 22478963 intron CG12576 - chrX 22479051 intron CG12576 - chrX_13_22475001 chrX_22475001 RAL-907 2664 chrX 22564567 22564582 chrX 22575119 22575146 jockey 4 10558 5.0 10.0 7.5 0.5 10579 chrX 22564567 intergenic not near genes chrX 22569856 intergenic not near genes chrX 22575146 intergenic not near genes chrX_4_22565001 chrX_22565001 RAL-907 2665 chrX 22646512 22646531 chrX 22646633 22646650 4 119 2.0 0.0 1.0 2.0 138 chrX 22646512 intergenic not near genes chrX 22646581 intergenic not near genes chrX 22646650 intergenic not near genes chrX_4_22645001 chrX_22645001 RAL-907 2666 chrX 22660115 22660143 chrX 22660661 22660674 5 550 2.0 2.0 2.0 1.7 559 chrX 22660115 intron CR44997 + chrX 22660394 intron CR44997 + chrX 22660674 intron CR44997 + chrX_5_22660001 chrX_22660001 RAL-907 2667 chrX 22661968 22661992 chrX 22662082 22662111 5 115 1.0 0.5 0.8 2.8 143 chrX 22661968 intron CR44997 + chrX 22662040 intron CR44997 + chrX 22662111 intron CR44997 + chrX_5_22660001 chrX_22660001 RAL-907 2668 chrX 22697479 22697528 chrX 22701796 22701805 Juan 15 4313 4.0 3.5 3.8 3.1 4326 chrX 22697479 intron CR44997 + chrX 22699642 intron CR44997 + chrX 22701805 intron CR44997 + chrX_15_22695001 chrX_22695001 RAL-907 2669 chrX 22764358 22764396 chrX 22764474 22764512 20 116 3.5 3.5 3.5 4.4 154 chrX 22764358 intron CR44997 + chrX 22764435 intron CR44997 + chrX 22764512 intron CR44997 + chrX_20_22760001 chrX_22760001 RAL-907 2670 chrX 22771510 22771536 chrX 22774801 22774842 297 5 3302 2.0 4.5 3.2 1.2 3332 chrX 22771510 intron CR44997 + chrX 22773176 intron CR44997 + chrX 22774842 intron CR44997 + chrX_5_22770001 chrX_22770001 RAL-907 2671 chrX 22798762 22798802 chrX 22798889 22798939 7 130 2.0 2.0 2.0 2.3 177 chrX 22798762 intergenic not near genes chrX 22798850 intergenic not near genes chrX 22798939 intergenic not near genes chrX_7_22795001 chrX_22795001 RAL-907 2672 chrX 22811980 22812004 chrX 22816773 22816797 F-element 10 4793 7.0 4.0 5.5 1.5 4817 chrX 22811980 intergenic CG12446 - chrX 22814388 intergenic not near genes chrX 22816797 intergenic not near genes chrX_10_22810001 chrX_22810001 RAL-907 2673 chrX 22824241 22824438 chrX 22824387 22824591 12 148 2.0 2.0 2.0 4.0 350 chrX 22824241 intergenic fog - chrX 22824416 3` UTR fog - chrX 22824591 3` UTR fog - chrX_12_22820001 chrX_22820001 RAL-907 2674 chrX 22916147 22916208 chrX 22916313 22916362 6 156 0.5 1.5 1.0 3.0 215 chrX 22916147 intergenic not near genes chrX 22916254 intergenic not near genes chrX 22916362 intergenic not near genes chrX_6_22915001 chrX_22915001 RAL-907 2675 chrX 22922501 22922546 chrX 22922600 22922622 5 91 4.5 3.5 4.0 1.0 121 chrX 22922501 intergenic not near genes chrX 22922562 intergenic not near genes chrX 22922622 intergenic not near genes chrX_5_22920001 chrX_22920001 RAL-907 2676 chrX 22967376 22967493 chrX 23154547 23154686 diver 6 187175 0.5 9.5 5.0 1.0 187310 chrX 22967376 intergenic not near genes chrX 23061031 intergenic not near genes chrX 23154686 intergenic not near genes chrX_6_23060001 chrX_23060001 RAL-907 2677 chrX 22987087 22987122 chrX 22989766 22989771 Burdock 8 2667 4.5 3.5 4.0 1.6 2684 chrX 22987087 intron,intron stnA -,stnB - chrX 22988429 intron,intron stnA -,stnB - chrX 22989771 intron,intron stnA -,stnB - chrX_8_22985001 chrX_22985001 RAL-907 2678 chrX 22992378 22992429 chrX 22992529 22992573 10 148 3.5 3.5 3.5 2.2 195 chrX 22992378 intron,intron stnA -,stnB - chrX 22992476 intron,intron stnA -,stnB - chrX 22992573 3` UTR,exon stnA -,stnB - chrX_10_22990001 chrX_22990001 RAL-907 2679 chrX 22996297 22996340 chrX 23003549 23003551 roo 15 7249 2.5 4.0 3.2 3.6 7254 chrX 22996297 intron,intron stnA -,stnB - chrX 22999924 intron,intron stnA -,stnB - chrX 23003551 intron,intron stnA -,stnB - chrX_15_22995001 chrX_22995001 RAL-907 2680 chrY 975774 975818 chrY 975871 975998 4 124 61.0 71.5 66.2 0.1 224 chrY 975774 intergenic not near genes chrY 975886 intergenic not near genes chrY 975998 intergenic not near genes chrY_4_975001 chrY_975001 RAL-907 2681 chrY 1420499 1420695 chrY 1420761 1420798 11 135 6.5 11.5 9.0 1.1 299 chrY 1420499 intergenic not near genes chrY 1420648 intergenic not near genes chrY 1420798 intergenic not near genes chrY_11_1420001 chrY_1420001 RAL-907