SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 46359 46384 chr2L 46431 46431 7 73 3.5 4.0 3.8 1.5 72 chr2L 46359 intron Cda5 - chr2L 46395 intron Cda5 - chr2L 46431 intron Cda5 - chr2L_7_45001 chr2L_45001 RAL-900_95b 2 chr2L 47473 47491 chr2L 52572 52581 jockey 6 5102 1.0 10.5 5.8 0.9 5108 chr2L 47473 intron Cda5 - chr2L 50027 intron Cda5 - chr2L 52581 intron Cda5 - chr2L_6_50001 chr2L_50001 RAL-900_95b 3 chr2L 976869 976913 chr2L 984514 984542 roo 13 7632 2.5 3.5 3.0 3.2 7673 chr2L 976869 intergenic not near genes chr2L 980706 intergenic not near genes chr2L 984542 intergenic not near genes chr2L_13_980001 chr2L_980001 RAL-900_95b 4 chr2L 1094238 1094254 chr2L 1094332 1094349 4 95 5.0 3.5 4.2 0.8 111 chr2L 1094238 intron CG4629 - chr2L 1094294 intron CG4629 - chr2L 1094349 intron CG4629 - chr2L_4_1090001 chr2L_1090001 RAL-900_95b 5 chr2L 1094258 1094270 chr2L 1094310 1094366 5 85 4.0 4.5 4.2 1.0 108 chr2L 1094258 intron CG4629 - chr2L 1094312 intron CG4629 - chr2L 1094366 intron CG4629 - chr2L_5_1090001 chr2L_1090001 RAL-900_95b 6 chr2L 1400778 1400820 chr2L 1401154 1401196 6 365 3.5 6.0 4.8 1.0 418 chr2L 1400778 intron lea - chr2L 1400987 intron lea - chr2L 1401196 intron lea - chr2L_6_1400001 chr2L_1400001 RAL-900_95b 7 chr2L 1908133 1908136 chr2L 1908201 1908244 4 84 0.0 5.0 2.5 1.1 111 chr2L 1908133 intron CG7337 + chr2L 1908188 intron CG7337 + chr2L 1908244 intron CG7337 + chr2L_4_1905001 chr2L_1905001 RAL-900_95b 8 chr2L 2100394 2100408 chr2L 2109529 2109538 roo 4 9134 6.0 3.0 4.5 0.7 9144 chr2L 2100394 intron dpr3 - chr2L 2104966 intron dpr3 - chr2L 2109538 intron dpr3 - chr2L_4_2100001 chr2L_2100001 RAL-900_95b 9 chr2L 2447813 2447844 chr2L 2447913 2447944 4 100 7.0 3.5 5.2 0.6 131 chr2L 2447813 intron dpp + chr2L 2447878 intron dpp + chr2L 2447944 intron dpp + chr2L_4_2445001 chr2L_2445001 RAL-900_95b 10 chr2L 2587814 2587846 chr2L 2587893 2587927 5 80 1.5 2.5 2.0 1.7 113 chr2L 2587814 intergenic not near genes chr2L 2587870 intergenic not near genes chr2L 2587927 intergenic not near genes chr2L_5_2585001 chr2L_2585001 RAL-900_95b 11 chr2L 2724412 2724439 chr2L 2724485 2724535 9 71 3.0 2.0 2.5 2.6 123 chr2L 2724412 intergenic not near genes chr2L 2724474 intergenic not near genes chr2L 2724535 intergenic not near genes chr2L_9_2720001 chr2L_2720001 RAL-900_95b 12 chr2L 2804227 2804255 chr2L 2804329 2804339 4 91 3.5 2.0 2.8 1.1 112 chr2L 2804227 intergenic not near genes chr2L 2804283 intergenic not near genes chr2L 2804339 intergenic not near genes chr2L_4_2800001 chr2L_2800001 RAL-900_95b 13 chr2L 2804256 2804271 chr2L 2804325 2804380 9 76 1.5 2.0 1.8 3.2 124 chr2L 2804256 intergenic not near genes chr2L 2804318 intergenic not near genes chr2L 2804380 intergenic not near genes chr2L_9_2800001 chr2L_2800001 RAL-900_95b 14 chr2L 3147298 3147307 chr2L 3147353 3147354 4 61 1.0 2.0 1.5 1.6 56 chr2L 3147298 3` UTR Mad - chr2L 3147326 3` UTR Mad - chr2L 3147354 3` UTR Mad - chr2L_4_3145001 chr2L_3145001 RAL-900_95b 15 chr2L 3202723 3202771 chr2L 3210172 3210196 mdg1 9 7430 6.5 5.0 5.8 1.3 7473 chr2L 3202723 intergenic not near genes chr2L 3206460 intergenic not near genes chr2L 3210196 intergenic CR45336 + chr2L_9_3205001 chr2L_3205001 RAL-900_95b 16 chr2L 3251500 3251510 chr2L 3259069 3259085 springer 4 7578 3.5 3.5 3.5 0.9 7585 chr2L 3251500 intergenic not near genes chr2L 3255292 intergenic not near genes chr2L 3259085 intergenic not near genes chr2L_4_3255001 chr2L_3255001 RAL-900_95b 17 chr2L 3388580 3388629 chr2L 3388841 3388850 pogo 5 242 3.5 2.0 2.8 1.3 270 chr2L 3388580 intergenic CG42460 - chr2L 3388715 intergenic CG42460 - chr2L 3388850 intergenic CG42460 -,CR44791 + chr2L_5_3385001 chr2L_3385001 RAL-900_95b 18 chr2L 3423556 3423569 chr2L 3424005 3424058 4 470 2.0 3.0 2.5 1.1 502 chr2L 3423556 intron pgant2 - chr2L 3423807 intron pgant2 - chr2L 3424058 intron pgant2 - chr2L_4_3420001 chr2L_3420001 RAL-900_95b 19 chr2L 3632352 3632373 chr2L 3632490 3632516 4 138 5.5 3.5 4.5 0.7 164 chr2L 3632352 intron for - chr2L 3632434 intron for - chr2L 3632516 intron for - chr2L_4_3630001 chr2L_3630001 RAL-900_95b 20 chr2L 3649782 3649821 chr2L 3654998 3655009 copia 4 5200 3.0 5.5 4.2 0.8 5227 chr2L 3649782 intron for - chr2L 3652396 intron for - chr2L 3655009 intron for - chr2L_4_3650001 chr2L_3650001 RAL-900_95b 21 chr2L 3755620 3755650 chr2L 3755741 3755761 6 118 5.0 1.5 3.2 1.4 141 chr2L 3755620 intergenic not near genes chr2L 3755690 intergenic not near genes chr2L 3755761 intergenic not near genes chr2L_6_3755001 chr2L_3755001 RAL-900_95b 22 chr2L 3787642 3787673 chr2L 3787776 3787807 4 132 1.0 5.5 3.2 1.0 165 chr2L 3787642 intron CG3921 + chr2L 3787724 intron CG3921 + chr2L 3787807 intron CG3921 + chr2L_4_3785001 chr2L_3785001 RAL-900_95b 23 chr2L 3943808 3943823 chr2L 3943888 3943934 5 86 2.0 2.0 2.0 1.7 126 chr2L 3943808 intron fred - chr2L 3943871 intron fred - chr2L 3943934 intron fred - chr2L_5_3940001 chr2L_3940001 RAL-900_95b 24 chr2L 4184457 4184502 chr2L 4184796 4184840 5 331 0.0 1.5 0.8 2.8 383 chr2L 4184457 intergenic not near genes chr2L 4184648 intergenic not near genes chr2L 4184840 intergenic not near genes chr2L_5_4180001 chr2L_4180001 RAL-900_95b 25 chr2L 4231757 4231784 chr2L 4232063 4232070 5 310 2.0 0.5 1.2 2.3 313 chr2L 4231757 intergenic not near genes chr2L 4231914 intergenic not near genes chr2L 4232070 intergenic not near genes chr2L_5_4230001 chr2L_4230001 RAL-900_95b 26 chr2L 4351482 4351496 chr2L 4351549 4351552 5 66 3.5 3.5 3.5 1.1 70 chr2L 4351482 intergenic CR44700 + chr2L 4351517 intergenic CR44700 + chr2L 4351552 intergenic CR44700 + chr2L_5_4350001 chr2L_4350001 RAL-900_95b 27 chr2L 4601729 4601737 chr2L 4609148 4609166 mdg1 4 7427 0.5 1.0 0.8 2.2 7437 chr2L 4601729 intron dp - chr2L 4605448 intron dp - chr2L 4609166 intron dp - chr2L_4_4605001 chr2L_4605001 RAL-900_95b 28 chr2L 4869472 4869484 chr2L 4869556 4869573 4 91 2.5 3.5 3.0 1.0 101 chr2L 4869472 intron pog + chr2L 4869522 intron pog + chr2L 4869573 intron pog + chr2L_4_4865001 chr2L_4865001 RAL-900_95b 29 chr2L 5092430 5092443 chr2L 5092502 5092529 6 77 2.0 1.0 1.5 2.4 99 chr2L 5092430 intron pgant5 - chr2L 5092480 intron pgant5 - chr2L 5092529 intron pgant5 - chr2L_6_5090001 chr2L_5090001 RAL-900_95b 30 chr2L 5117280 5117319 chr2L 5117382 5117393 5 96 5.0 2.0 3.5 1.1 113 chr2L 5117280 intron Msp300 + chr2L 5117336 intron Msp300 + chr2L 5117393 intron Msp300 + chr2L_5_5115001 chr2L_5115001 RAL-900_95b 31 chr2L 5589805 5589834 chr2L 5589979 5590009 4 183 0.5 3.5 2.0 1.3 204 chr2L 5589805 intergenic not near genes chr2L 5589907 intergenic not near genes chr2L 5590009 intergenic not near genes chr2L_4_5585001 chr2L_5585001 RAL-900_95b 32 chr2L 5593126 5593156 chr2L 5593231 5593242 8 105 4.5 4.0 4.2 1.5 116 chr2L 5593126 intergenic not near genes chr2L 5593184 intergenic not near genes chr2L 5593242 intergenic not near genes chr2L_8_5590001 chr2L_5590001 RAL-900_95b 33 chr2L 5676897 5676902 chr2L 5676998 5677008 5 111 2.5 2.0 2.2 1.6 111 chr2L 5676897 intergenic not near genes chr2L 5676952 intergenic not near genes chr2L 5677008 intergenic not near genes chr2L_5_5675001 chr2L_5675001 RAL-900_95b 34 chr2L 5676907 5676922 chr2L 5676988 5677038 5 103 2.0 1.5 1.8 1.8 131 chr2L 5676907 intergenic not near genes chr2L 5676972 intergenic not near genes chr2L 5677038 intergenic not near genes chr2L_5_5675001 chr2L_5675001 RAL-900_95b 35 chr2L 5780919 5780936 chr2L 5781011 5781019 5 103 1.5 4.0 2.8 1.3 100 chr2L 5780919 intron CG9171 - chr2L 5780969 intron CG9171 - chr2L 5781019 intron CG9171 - chr2L_5_5780001 chr2L_5780001 RAL-900_95b 36 chr2L 5805207 5805235 chr2L 5805314 5805317 4 102 2.0 1.5 1.8 1.4 110 chr2L 5805207 intergenic CG11034 + chr2L 5805262 intergenic CG11034 + chr2L 5805317 intergenic CG11034 + chr2L_4_5805001 chr2L_5805001 RAL-900_95b 37 chr2L 5819678 5819701 chr2L 5819756 5819798 6 90 2.0 3.5 2.8 1.6 120 chr2L 5819678 intergenic not near genes chr2L 5819738 intergenic not near genes chr2L 5819798 intergenic not near genes chr2L_6_5815001 chr2L_5815001 RAL-900_95b 38 chr2L 5904465 5904474 chr2L 5904540 5904549 4 82 0.0 0.0 0.0 4.0 84 chr2L 5904465 intron CG9021 - chr2L 5904507 intron CG9021 - chr2L 5904549 intron CG9021 - chr2L_4_5900001 chr2L_5900001 RAL-900_95b 39 chr2L 5926615 5926624 chr2L 5926704 5926723 6 96 7.0 2.5 4.8 1.0 108 chr2L 5926615 intron dsf + chr2L 5926669 intron dsf + chr2L 5926723 intron dsf + chr2L_6_5925001 chr2L_5925001 RAL-900_95b 40 chr2L 5931301 5931513 chr2L 5931428 5931642 7 125 1.5 6.0 3.8 1.5 341 chr2L 5931301 intron dsf + chr2L 5931472 intron dsf + chr2L 5931642 intron dsf + chr2L_7_5930001 chr2L_5930001 RAL-900_95b 41 chr2L 5962290 5962302 chr2L 5962346 5962356 4 75 1.5 3.0 2.2 1.2 66 chr2L 5962290 intergenic not near genes chr2L 5962323 intergenic not near genes chr2L 5962356 intergenic not near genes chr2L_4_5960001 chr2L_5960001 RAL-900_95b 42 chr2L 6002428 6002471 chr2L 6002534 6002537 5 90 4.5 7.0 5.8 0.7 109 chr2L 6002428 3` UTR Tsp26A + chr2L 6002482 3` UTR Tsp26A + chr2L 6002537 3` UTR Tsp26A + chr2L_5_6000001 chr2L_6000001 RAL-900_95b 43 chr2L 6050422 6050466 chr2L 6050546 6050590 5 118 3.5 3.5 3.5 1.1 168 chr2L 6050422 3` UTR CG12393 + chr2L 6050506 intergenic CG12393 +,CG9135 + chr2L 6050590 intergenic CG12393 +,CG9135 + chr2L_5_6050001 chr2L_6050001 RAL-900_95b 44 chr2L 6318716 6318763 chr2L 6318890 6318902 5 158 1.0 6.0 3.5 1.1 186 chr2L 6318716 intron Ddr + chr2L 6318809 intron Ddr + chr2L 6318902 intron Ddr + chr2L_5_6315001 chr2L_6315001 RAL-900_95b 45 chr2L 6564832 6564851 chr2L 6564945 6564964 4 112 3.5 1.0 2.2 1.2 132 chr2L 6564832 3` UTR CG13766 - chr2L 6564898 3` UTR CG13766 - chr2L 6564964 3` UTR CG13766 - chr2L_4_6560001 chr2L_6560001 RAL-900_95b 46 chr2L 6564866 6564879 chr2L 6564942 6564991 4 92 2.5 0.5 1.5 1.6 125 chr2L 6564866 3` UTR CG13766 - chr2L 6564928 3` UTR CG13766 - chr2L 6564991 3` UTR CG13766 - chr2L_4_6560001 chr2L_6560001 RAL-900_95b 47 chr2L 6590091 6590125 chr2L 6590171 6590193 4 72 0.0 0.5 0.2 3.3 102 chr2L 6590091 intron CG11319 - chr2L 6590142 intron CG11319 - chr2L 6590193 intron CG11319 - chr2L_4_6590001 chr2L_6590001 RAL-900_95b 48 chr2L 6744545 6744596 chr2L 6744651 6744687 9 87 0.0 3.5 1.8 3.2 142 chr2L 6744545 intron CG11221 + chr2L 6744616 intron CG11221 + chr2L 6744687 intron,3` UTR CG11221 +,CG31910 - chr2L_9_6740001 chr2L_6740001 RAL-900_95b 49 chr2L 6804266 6804300 chr2L 6804349 6804393 6 94 3.0 2.5 2.8 1.6 127 chr2L 6804266 3` UTR CG11236 + chr2L 6804330 3` UTR,3` UTR CG11236 +,CG17375 - chr2L 6804393 3` UTR CG17375 - chr2L_6_6800001 chr2L_6800001 RAL-900_95b 50 chr2L 6887479 6887515 chr2L 6887649 6887650 4 158 2.5 0.0 1.2 1.8 171 chr2L 6887479 intron Nlg2 + chr2L 6887564 intron Nlg2 + chr2L 6887650 intron Nlg2 + chr2L_4_6885001 chr2L_6885001 RAL-900_95b 51 chr2L 6891429 6891472 chr2L 6891547 6891550 8 106 2.5 4.5 3.5 1.8 121 chr2L 6891429 intron Nlg2 + chr2L 6891490 intron Nlg2 + chr2L 6891550 intron Nlg2 + chr2L_8_6890001 chr2L_6890001 RAL-900_95b 52 chr2L 7126748 7126868 chr2L 7126849 7126942 6 96 0.0 0.0 0.0 6.0 194 chr2L 7126748 intron Pvf3 - chr2L 7126845 intron Pvf3 - chr2L 7126942 intron Pvf3 - chr2L_6_7125001 chr2L_7125001 RAL-900_95b 53 chr2L 7343314 7343353 chr2L 7350440 7350478 roo 6 7122 2.0 2.0 2.0 2.0 7164 chr2L 7343314 intron Wnt6 + chr2L 7346896 intron Wnt6 + chr2L 7350478 intron Wnt6 + chr2L_6_7345001 chr2L_7345001 RAL-900_95b 54 chr2L 7526085 7526123 chr2L 7526187 7526231 11 96 4.0 4.0 4.0 2.2 146 chr2L 7526085 intron RapGAP1 - chr2L 7526158 intron RapGAP1 - chr2L 7526231 intron RapGAP1 - chr2L_11_7525001 chr2L_7525001 RAL-900_95b 55 chr2L 7609513 7609751 chr2L 7609628 7609813 12 91 2.5 3.5 3.0 3.0 300 chr2L 7609513 intron CG6739 + chr2L 7609663 intron CG6739 + chr2L 7609813 intron CG6739 + chr2L_12_7605001 chr2L_7605001 RAL-900_95b 56 chr2L 7742513 7742570 chr2L 7742613 7742635 4 74 0.5 2.5 1.5 1.6 122 chr2L 7742513 intergenic not near genes chr2L 7742574 intergenic not near genes chr2L 7742635 intergenic not near genes chr2L_4_7740001 chr2L_7740001 RAL-900_95b 57 chr2L 7867566 7867588 chr2L 7867659 7867702 4 101 3.0 4.5 3.8 0.8 136 chr2L 7867566 intron Proc - chr2L 7867634 intron Proc - chr2L 7867702 intron Proc - chr2L_4_7865001 chr2L_7865001 RAL-900_95b 58 chr2L 7922727 7922773 chr2L 7922828 7922849 9 87 2.0 6.5 4.2 1.7 122 chr2L 7922727 intron Snoo - chr2L 7922788 intron Snoo - chr2L 7922849 intron Snoo - chr2L_9_7920001 chr2L_7920001 RAL-900_95b 59 chr2L 8167127 8167176 chr2L 8167238 8167246 4 95 4.0 3.0 3.5 0.9 119 chr2L 8167127 intron Piezo + chr2L 8167186 intron Piezo + chr2L 8167246 intron Piezo + chr2L_4_8165001 chr2L_8165001 RAL-900_95b 60 chr2L 8239746 8239763 chr2L 8239810 8239828 4 78 2.5 3.0 2.8 1.1 82 chr2L 8239746 5` UTR Pvr - chr2L 8239787 5` UTR Pvr - chr2L 8239828 5` UTR Pvr - chr2L_4_8235001 chr2L_8235001 RAL-900_95b 61 chr2L 8594470 8594487 chr2L 8601519 8601561 297 4 7068 3.5 3.0 3.2 1.0 7091 chr2L 8594470 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598016 intron Sema-1a + chr2L 8601561 intron Sema-1a + chr2L_4_8595001 chr2L_8595001 RAL-900_95b 62 chr2L 8612850 8612870 chr2L 8612932 8612942 5 87 1.0 3.5 2.2 1.6 92 chr2L 8612850 intron Sema-1a + chr2L 8612896 intron Sema-1a + chr2L 8612942 intron Sema-1a + chr2L_5_8610001 chr2L_8610001 RAL-900_95b 63 chr2L 8719192 8719235 chr2L 8719281 8719285 5 82 3.5 1.5 2.5 1.4 93 chr2L 8719192 intron raw - chr2L 8719238 intron raw - chr2L 8719285 intron raw - chr2L_5_8715001 chr2L_8715001 RAL-900_95b 64 chr2L 8723113 8723134 chr2L 8731509 8731531 Tirant 4 8397 4.5 2.5 3.5 0.9 8418 chr2L 8723113 intron raw - chr2L 8727322 intron raw - chr2L 8731531 intron raw - chr2L_4_8725001 chr2L_8725001 RAL-900_95b 65 chr2L 8736249 8736257 chr2L 8736349 8736352 4 99 5.0 4.0 4.5 0.7 103 chr2L 8736249 intron raw - chr2L 8736300 intron raw - chr2L 8736352 intron raw - chr2L_4_8735001 chr2L_8735001 RAL-900_95b 66 chr2L 8784688 8784716 chr2L 8784814 8784846 5 125 5.5 1.5 3.5 1.1 158 chr2L 8784688 intergenic not near genes chr2L 8784767 intergenic not near genes chr2L 8784846 intergenic not near genes chr2L_5_8780001 chr2L_8780001 RAL-900_95b 67 chr2L 8799785 8799830 chr2L 8799921 8799933 5 121 2.5 4.0 3.2 1.2 148 chr2L 8799785 intergenic not near genes chr2L 8799859 intergenic not near genes chr2L 8799933 intergenic not near genes chr2L_5_8795001 chr2L_8795001 RAL-900_95b 68 chr2L 9000262 9000307 chr2L 9007792 9007795 roo 7 7512 4.0 5.0 4.5 1.3 7533 chr2L 9000262 intergenic Try29F + chr2L 9004028 intergenic not near genes chr2L 9007795 intergenic not near genes chr2L_7_9000001 chr2L_9000001 RAL-900_95b 69 chr2L 9040034 9040058 chr2L 9040116 9040128 8 90 0.5 3.0 1.8 2.9 94 chr2L 9040034 intergenic not near genes chr2L 9040081 intergenic not near genes chr2L 9040128 intergenic not near genes chr2L_8_9040001 chr2L_9040001 RAL-900_95b 70 chr2L 9044100 9044130 chr2L 9044203 9044217 4 102 0.5 2.0 1.2 1.8 117 chr2L 9044100 intergenic not near genes chr2L 9044158 intergenic not near genes chr2L 9044217 intergenic not near genes chr2L_4_9040001 chr2L_9040001 RAL-900_95b 71 chr2L 9279966 9280022 chr2L 9280080 9280109 5 97 0.5 3.0 1.8 1.8 143 chr2L 9279966 intron Ggamma30A + chr2L 9280038 intron Ggamma30A + chr2L 9280109 intron Ggamma30A + chr2L_5_9280001 chr2L_9280001 RAL-900_95b 72 chr2L 9287312 9287357 chr2L 9287423 9287433 6 99 2.0 3.5 2.8 1.6 121 chr2L 9287312 intron Ggamma30A + chr2L 9287372 intron Ggamma30A + chr2L 9287433 intron Ggamma30A + chr2L_6_9285001 chr2L_9285001 RAL-900_95b 73 chr2L 9297359 9297404 chr2L 9297456 9297471 10 82 3.5 6.0 4.8 1.7 112 chr2L 9297359 3` UTR Ggamma30A + chr2L 9297415 3` UTR Ggamma30A + chr2L 9297471 3` UTR Ggamma30A + chr2L_10_9295001 chr2L_9295001 RAL-900_95b 74 chr2L 9322796 9322832 chr2L 9322892 9322903 4 89 1.5 3.0 2.2 1.2 107 chr2L 9322796 intergenic not near genes chr2L 9322850 intergenic not near genes chr2L 9322903 intergenic not near genes chr2L_4_9320001 chr2L_9320001 RAL-900_95b 75 chr2L 9391653 9391678 chr2L 9391759 9391772 6 103 8.5 5.5 7.0 0.8 119 chr2L 9391653 intron Shawl - chr2L 9391712 intron Shawl - chr2L 9391772 intron Shawl - chr2L_6_9390001 chr2L_9390001 RAL-900_95b 76 chr2L 9391682 9391705 chr2L 9391754 9391786 9 80 5.0 4.5 4.8 1.6 104 chr2L 9391682 intron Shawl - chr2L 9391734 intron Shawl - chr2L 9391786 intron Shawl - chr2L_9_9390001 chr2L_9390001 RAL-900_95b 77 chr2L 9393498 9393527 chr2L 9396472 9396512 jockey 8 2970 0.5 5.0 2.8 2.1 3014 chr2L 9393498 intron Shawl - chr2L 9395005 intron Shawl - chr2L 9396512 intron Shawl - chr2L_8_9395001 chr2L_9395001 RAL-900_95b 78 chr2L 9490528 9490550 chr2L 9490603 9490614 5 79 1.0 3.5 2.2 1.6 86 chr2L 9490528 intergenic not near genes chr2L 9490571 intergenic not near genes chr2L 9490614 intergenic not near genes chr2L_5_9490001 chr2L_9490001 RAL-900_95b 79 chr2L 9839269 9839293 chr2L 9839359 9839363 5 86 2.0 2.5 2.2 1.6 94 chr2L 9839269 intron nAChRalpha6 - chr2L 9839316 intron nAChRalpha6 - chr2L 9839363 intron nAChRalpha6 - chr2L_5_9835001 chr2L_9835001 RAL-900_95b 80 chr2L 9855114 9855129 chr2L 9855177 9855217 5 70 4.0 4.5 4.2 1.0 103 chr2L 9855114 intron nAChRalpha6 - chr2L 9855166 intron nAChRalpha6 - chr2L 9855217 intron nAChRalpha6 - chr2L_5_9855001 chr2L_9855001 RAL-900_95b 81 chr2L 9871554 9871562 chr2L 9871609 9871650 4 90 1.5 0.0 0.8 2.2 96 chr2L 9871554 intron nAChRalpha6 - chr2L 9871602 intron nAChRalpha6 - chr2L 9871650 intron nAChRalpha6 - chr2L_4_9870001 chr2L_9870001 RAL-900_95b 82 chr2L 9973741 9973758 chr2L 9980844 9980868 HMS-Beagle 4 7107 3.5 0.5 2.0 1.3 7127 chr2L 9973741 intergenic not near genes chr2L 9977304 intergenic not near genes chr2L 9980868 intergenic not near genes chr2L_4_9975001 chr2L_9975001 RAL-900_95b 83 chr2L 10095619 10095655 chr2L 10095709 10095755 9 85 3.0 0.5 1.8 3.2 136 chr2L 10095619 intron CG44153 - chr2L 10095687 intron CG44153 - chr2L 10095755 intron CG44153 - chr2L_9_10095001 chr2L_10095001 RAL-900_95b 84 chr2L 10191438 10191485 chr2L 10191541 10191586 5 103 1.5 4.0 2.8 1.3 148 chr2L 10191438 intron,5` UTR Sur -,CG31874 - chr2L 10191512 intron Sur - chr2L 10191586 intron Sur - chr2L_5_10190001 chr2L_10190001 RAL-900_95b 85 chr2L 10204493 10204532 chr2L 10204590 10204632 6 90 3.5 0.5 2.0 2.0 139 chr2L 10204493 intergenic CG34159 -,CG5734 - chr2L 10204562 intergenic CG5734 -,CG34159 - chr2L 10204632 intergenic CG5734 -,CG34159 - chr2L_6_10200001 chr2L_10200001 RAL-900_95b 86 chr2L 10515381 10515389 chr2L 10515454 10515502 5 90 5.5 5.0 5.2 0.8 121 chr2L 10515381 intron,intron CG45083 -,Fatp - chr2L 10515442 intron,intron CG45083 -,Fatp - chr2L 10515502 intron,intron CG45083 -,Fatp - chr2L_5_10515001 chr2L_10515001 RAL-900_95b 87 chr2L 10574555 10574599 chr2L 10574669 10574678 5 106 3.5 2.5 3.0 1.2 123 chr2L 10574555 intron Trim9 + chr2L 10574616 intron Trim9 + chr2L 10574678 intron Trim9 + chr2L_5_10570001 chr2L_10570001 RAL-900_95b 88 chr2L 10634745 10634780 chr2L 10634845 10634850 4 85 2.0 4.5 3.2 1.0 105 chr2L 10634745 intron CG7329 - chr2L 10634798 intron CG7329 - chr2L 10634850 intron CG7329 - chr2L_4_10630001 chr2L_10630001 RAL-900_95b 89 chr2L 10640633 10640672 chr2L 10640732 10640781 5 103 1.0 2.0 1.5 2.0 148 chr2L 10640633 exon CG31872 + chr2L 10640707 exon CG31872 + chr2L 10640781 exon CG31872 + chr2L_5_10640001 chr2L_10640001 RAL-900_95b 90 chr2L 11188805 11188811 chr2L 11188858 11188898 5 68 0.5 3.0 1.8 1.8 93 chr2L 11188805 intron Ca-beta - chr2L 11188852 intron Ca-beta - chr2L 11188898 intron Ca-beta - chr2L_5_11185001 chr2L_11185001 RAL-900_95b 91 chr2L 11224035 11224082 chr2L 11224166 11224172 7 120 5.0 3.0 4.0 1.4 137 chr2L 11224035 intron ab + chr2L 11224104 intron ab + chr2L 11224172 intron ab + chr2L_7_11220001 chr2L_11220001 RAL-900_95b 92 chr2L 11292354 11292393 chr2L 11292456 11292480 6 96 3.5 3.5 3.5 1.3 126 chr2L 11292354 intergenic not near genes chr2L 11292417 intergenic not near genes chr2L 11292480 intergenic not near genes chr2L_6_11290001 chr2L_11290001 RAL-900_95b 93 chr2L 11293710 11293749 chr2L 11293867 11293906 8 152 2.5 0.5 1.5 3.2 196 chr2L 11293710 intergenic not near genes chr2L 11293808 intergenic not near genes chr2L 11293906 intergenic not near genes chr2L_8_11290001 chr2L_11290001 RAL-900_95b 94 chr2L 11413285 11413317 chr2L 11413424 11413461 6 131 1.5 4.0 2.8 1.6 176 chr2L 11413285 intergenic not near genes chr2L 11413373 intergenic not near genes chr2L 11413461 intergenic not near genes chr2L_6_11410001 chr2L_11410001 RAL-900_95b 95 chr2L 11585233 11585240 chr2L 11585289 11585304 5 75 0.5 6.0 3.2 1.2 71 chr2L 11585233 intron kek2 + chr2L 11585268 intron kek2 + chr2L 11585304 intron kek2 + chr2L_5_11585001 chr2L_11585001 RAL-900_95b 96 chr2L 11612669 11612695 chr2L 11612752 11612763 8 86 4.0 2.5 3.2 1.9 94 chr2L 11612669 intron kek2 + chr2L 11612716 intron kek2 + chr2L 11612763 intron kek2 + chr2L_8_11610001 chr2L_11610001 RAL-900_95b 97 chr2L 11672126 11672167 chr2L 11672253 11672265 6 116 2.5 1.0 1.8 2.1 139 chr2L 11672126 intergenic not near genes chr2L 11672196 intergenic not near genes chr2L 11672265 intergenic not near genes chr2L_6_11670001 chr2L_11670001 RAL-900_95b 98 chr2L 11820432 11820462 chr2L 11820511 11820553 14 91 2.0 3.5 2.8 3.7 121 chr2L 11820432 intron Pde1c - chr2L 11820492 intron Pde1c - chr2L 11820553 intron Pde1c - chr2L_14_11820001 chr2L_11820001 RAL-900_95b 99 chr2L 11862339 11862390 chr2L 11862452 11862463 10 101 2.0 3.5 2.8 2.6 124 chr2L 11862339 intron Pde1c - chr2L 11862401 intron Pde1c - chr2L 11862463 intron Pde1c - chr2L_10_11860001 chr2L_11860001 RAL-900_95b 100 chr2L 11906706 11906723 chr2L 11906794 11906826 5 96 2.5 3.0 2.8 1.3 120 chr2L 11906706 intron Pde1c - chr2L 11906766 intron Pde1c - chr2L 11906826 intron Pde1c - chr2L_5_11905001 chr2L_11905001 RAL-900_95b 101 chr2L 11951956 11951988 chr2L 11952064 11952065 4 100 2.5 3.0 2.8 1.1 109 chr2L 11951956 intergenic CR43314 - chr2L 11952010 intergenic CR43314 - chr2L 11952065 intergenic CR43314 - chr2L_4_11950001 chr2L_11950001 RAL-900_95b 102 chr2L 12008572 12008580 chr2L 12008629 12008644 6 71 1.0 2.5 1.8 2.1 72 chr2L 12008572 exon Rh5 + chr2L 12008608 exon Rh5 + chr2L 12008644 exon Rh5 + chr2L_6_12005001 chr2L_12005001 RAL-900_95b 103 chr2L 12031398 12031415 chr2L 12031469 12031516 7 82 1.5 2.5 2.0 2.3 118 chr2L 12031398 intron dmGlut + chr2L 12031457 intron dmGlut + chr2L 12031516 intron dmGlut + chr2L_7_12030001 chr2L_12030001 RAL-900_95b 104 chr2L 12067323 12067342 chr2L 12074395 12074414 297 6 7072 5.5 3.0 4.2 1.2 7091 chr2L 12067323 intergenic not near genes chr2L 12070868 intergenic not near genes chr2L 12074414 intergenic not near genes chr2L_6_12070001 chr2L_12070001 RAL-900_95b 105 chr2L 12131479 12131495 chr2L 12131575 12131577 5 95 3.5 4.0 3.8 1.0 98 chr2L 12131479 intron rho-6 - chr2L 12131528 intron rho-6 - chr2L 12131577 intron rho-6 - chr2L_5_12130001 chr2L_12130001 RAL-900_95b 106 chr2L 12175796 12175841 chr2L 12175897 12175943 4 91 0.5 0.0 0.2 3.3 147 chr2L 12175796 intron,intron aret +,atilla - chr2L 12175870 intron,intron aret +,atilla - chr2L 12175943 intron,intron aret +,atilla - chr2L_4_12175001 chr2L_12175001 RAL-900_95b 107 chr2L 12229564 12229608 chr2L 12229661 12229670 6 80 0.5 3.0 1.8 2.1 106 chr2L 12229564 intron aret + chr2L 12229617 intron aret + chr2L 12229670 intron aret + chr2L_6_12225001 chr2L_12225001 RAL-900_95b 108 chr2L 12366861 12366889 chr2L 12366947 12366950 5 79 3.5 3.0 3.2 1.2 89 chr2L 12366861 intron bru-2 + chr2L 12366906 intron bru-2 + chr2L 12366950 intron bru-2 + chr2L_5_12365001 chr2L_12365001 RAL-900_95b 109 chr2L 12731052 12731085 chr2L 12735834 12735837 F-element 6 4774 4.0 3.0 3.5 1.3 4785 chr2L 12731052 intron MRP + chr2L 12733444 intron MRP + chr2L 12735837 intron MRP + chr2L_6_12730001 chr2L_12730001 RAL-900_95b 110 chr2L 12781801 12781812 chr2L 12789245 12789250 Quasimodo 4 7449 6.5 1.5 4.0 0.8 7449 chr2L 12781801 intergenic not near genes chr2L 12785526 intergenic not near genes chr2L 12789250 intergenic not near genes chr2L_4_12785001 chr2L_12785001 RAL-900_95b 111 chr2L 12791587 12791628 chr2L 12795282 12795323 F-element 5 3691 3.0 7.5 5.2 0.8 3736 chr2L 12791587 intergenic not near genes chr2L 12793455 intergenic not near genes chr2L 12795323 intergenic not near genes chr2L_5_12790001 chr2L_12790001 RAL-900_95b 112 chr2L 13215396 13215408 chr2L 13215660 13215698 4 277 5.0 6.5 5.8 0.6 302 chr2L 13215396 intergenic kek4 -,snRNA:U2:34ABb +,snRNA:U2:34ABc + chr2L 13215547 intergenic kek4 -,snRNA:U2:34ABb +,snRNA:U2:34ABc + chr2L 13215698 intergenic snRNA:U2:34ABb +,snRNA:U2:34ABc +,kek4 - chr2L_4_13215001 chr2L_13215001 RAL-900_95b 113 chr2L 13405645 13405664 chr2L 13410455 13410465 Doc 4 4808 3.5 8.0 5.8 0.6 4820 chr2L 13405645 exon CG7110 + chr2L 13408055 intron CG7110 + chr2L 13410465 intron CG7110 + chr2L_4_13405001 chr2L_13405001 RAL-900_95b 114 chr2L 13435226 13435269 chr2L 13435388 13435421 5 159 2.5 1.5 2.0 1.7 195 chr2L 13435226 intron CG42784 + chr2L 13435324 intron CG42784 + chr2L 13435421 intron CG42784 + chr2L_5_13435001 chr2L_13435001 RAL-900_95b 115 chr2L 13437330 13437357 chr2L 13437429 13437460 5 96 2.5 0.0 1.2 2.3 130 chr2L 13437330 intron,intron CG42784 +,Tehao + chr2L 13437395 intron,intron CG42784 +,Tehao + chr2L 13437460 intron,intron CG42784 +,Tehao + chr2L_5_13435001 chr2L_13435001 RAL-900_95b 116 chr2L 13449451 13449461 chr2L 13456907 13456917 Quasimodo 4 7456 3.5 2.0 2.8 1.1 7466 chr2L 13449451 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453184 intron CG42784 + chr2L 13456917 intron CG42784 + chr2L_4_13450001 chr2L_13450001 RAL-900_95b 117 chr2L 13481443 13481481 chr2L 13482062 13482063 jockey 5 614 1.0 1.5 1.2 2.3 620 chr2L 13481443 intron CG42784 + chr2L 13481753 intron CG42784 + chr2L 13482063 intron CG42784 + chr2L_5_13480001 chr2L_13480001 RAL-900_95b 118 chr2L 13571710 13571718 chr2L 13571774 13571777 4 62 4.0 0.0 2.0 1.3 67 chr2L 13571710 intron kuz + chr2L 13571744 intron kuz + chr2L 13571777 intron kuz + chr2L_4_13570001 chr2L_13570001 RAL-900_95b 119 chr2L 13720221 13720241 chr2L 13720329 13720349 4 108 2.5 0.0 1.2 1.8 128 chr2L 13720221 intergenic not near genes chr2L 13720285 intergenic not near genes chr2L 13720349 intergenic not near genes chr2L_4_13720001 chr2L_13720001 RAL-900_95b 120 chr2L 13794686 13794732 chr2L 13794806 13794812 5 109 2.5 2.0 2.2 1.6 126 chr2L 13794686 intron Sec71 + chr2L 13794749 intron Sec71 + chr2L 13794812 intron Sec71 + chr2L_5_13790001 chr2L_13790001 RAL-900_95b 121 chr2L 13853082 13853110 chr2L 13862238 13862249 roo 6 9157 6.0 3.5 4.8 1.0 9167 chr2L 13853082 intron CenG1A + chr2L 13857666 intron CenG1A + chr2L 13862249 intron CenG1A + chr2L_6_13855001 chr2L_13855001 RAL-900_95b 122 chr2L 13988266 13988299 chr2L 13988372 13988376 4 99 1.5 4.5 3.0 1.0 110 chr2L 13988266 intron rk - chr2L 13988321 intron rk - chr2L 13988376 intron rk - chr2L_4_13985001 chr2L_13985001 RAL-900_95b 123 chr2L 14109501 14109538 chr2L 14109612 14109649 10 104 3.0 3.5 3.2 2.4 148 chr2L 14109501 intergenic CG15293 -,CG31769 - chr2L 14109575 intergenic CG31769 -,CG15293 - chr2L 14109649 3` UTR CG31769 - chr2L_10_14105001 chr2L_14105001 RAL-900_95b 124 chr2L 14160673 14160715 chr2L 14160779 14160781 11 97 4.0 4.0 4.0 2.2 108 chr2L 14160673 intergenic CG17341 +,CG43332 - chr2L 14160727 intergenic CG17341 +,CG43332 - chr2L 14160781 intergenic CG17341 +,CG43332 - chr2L_11_14160001 chr2L_14160001 RAL-900_95b 125 chr2L 14180052 14180083 chr2L 14180142 14180149 5 87 5.0 1.5 3.2 1.2 97 chr2L 14180052 intron CG43333 - chr2L 14180100 intron CG43333 - chr2L 14180149 intron CG43333 - chr2L_5_14180001 chr2L_14180001 RAL-900_95b 126 chr2L 14246293 14246313 chr2L 14246359 14246386 5 79 0.0 0.5 0.2 4.2 93 chr2L 14246293 intergenic not near genes chr2L 14246340 intergenic not near genes chr2L 14246386 intergenic not near genes chr2L_5_14245001 chr2L_14245001 RAL-900_95b 127 chr2L 14340505 14340560 chr2L 14340607 14340614 6 84 0.0 3.0 1.5 2.4 109 chr2L 14340505 intron CG33090 + chr2L 14340560 intron CG33090 + chr2L 14340614 intron CG33090 + chr2L_6_14340001 chr2L_14340001 RAL-900_95b 128 chr2L 14369117 14369158 chr2L 14369239 14369264 12 119 2.0 1.5 1.8 4.3 147 chr2L 14369117 intergenic not near genes chr2L 14369190 intergenic not near genes chr2L 14369264 intergenic not near genes chr2L_12_14365001 chr2L_14365001 RAL-900_95b 129 chr2L 14374798 14374799 chr2L 14374872 14374910 4 93 2.0 3.5 2.8 1.1 112 chr2L 14374798 intergenic not near genes chr2L 14374854 intergenic not near genes chr2L 14374910 intergenic not near genes chr2L_4_14370001 chr2L_14370001 RAL-900_95b 130 chr2L 14378670 14378676 chr2L 14378729 14378758 4 64 4.0 0.5 2.2 1.2 88 chr2L 14378670 3` UTR ppk - chr2L 14378714 3` UTR ppk - chr2L 14378758 3` UTR ppk - chr2L_4_14375001 chr2L_14375001 RAL-900_95b 131 chr2L 14504314 14504356 chr2L 14504418 14504419 9 90 3.5 3.5 3.5 2.0 105 chr2L 14504314 intergenic not near genes chr2L 14504366 intergenic not near genes chr2L 14504419 intergenic not near genes chr2L_9_14500001 chr2L_14500001 RAL-900_95b 132 chr2L 14524600 14524649 chr2L 14525117 14525140 5 501 3.0 4.5 3.8 1.0 540 chr2L 14524600 intron CG33648 + chr2L 14524870 intron CG33648 + chr2L 14525140 exon CG33648 + chr2L_5_14520001 chr2L_14520001 RAL-900_95b 133 chr2L 14570704 14570717 chr2L 14570805 14570816 4 100 0.0 3.0 1.5 1.6 112 chr2L 14570704 intergenic not near genes chr2L 14570760 intergenic not near genes chr2L 14570816 intergenic not near genes chr2L_4_14570001 chr2L_14570001 RAL-900_95b 134 chr2L 14588404 14588419 chr2L 14588536 14588543 4 137 4.5 3.5 4.0 0.8 139 chr2L 14588404 intergenic CG42680 - chr2L 14588474 intergenic CG42680 - chr2L 14588543 intergenic CG42680 - chr2L_4_14585001 chr2L_14585001 RAL-900_95b 135 chr2L 14596930 14596967 chr2L 14597047 14597075 7 115 2.5 6.0 4.2 1.3 145 chr2L 14596930 intergenic not near genes chr2L 14597002 intergenic not near genes chr2L 14597075 intergenic not near genes chr2L_7_14595001 chr2L_14595001 RAL-900_95b 136 chr2L 14624538 14624561 chr2L 14624635 14624645 4 95 3.0 3.0 3.0 1.0 107 chr2L 14624538 intron osp - chr2L 14624592 intron osp - chr2L 14624645 intron osp - chr2L_4_14620001 chr2L_14620001 RAL-900_95b 137 chr2L 14769348 14769368 chr2L 14769527 14769547 5 179 5.5 3.0 4.2 1.0 199 chr2L 14769348 intergenic not near genes chr2L 14769448 intergenic not near genes chr2L 14769547 intergenic not near genes chr2L_5_14765001 chr2L_14765001 RAL-900_95b 138 chr2L 14769373 14769390 chr2L 14769520 14769536 6 160 3.0 3.0 3.0 1.5 163 chr2L 14769373 intergenic not near genes chr2L 14769454 intergenic not near genes chr2L 14769536 intergenic not near genes chr2L_6_14765001 chr2L_14765001 RAL-900_95b 139 chr2L 14839730 14839744 chr2L 14839826 14839840 4 96 6.0 3.0 4.5 0.7 110 chr2L 14839730 intergenic not near genes chr2L 14839785 intergenic not near genes chr2L 14839840 intergenic not near genes chr2L_4_14835001 chr2L_14835001 RAL-900_95b 140 chr2L 14840956 14841001 chr2L 14841064 14841070 5 90 2.0 0.0 1.0 2.5 114 chr2L 14840956 3` UTR CR43805 - chr2L 14841013 3` UTR CR43805 - chr2L 14841070 3` UTR CR43805 - chr2L_5_14840001 chr2L_14840001 RAL-900_95b 141 chr2L 14849271 14849286 chr2L 14849374 14849396 4 108 4.5 2.5 3.5 0.9 125 chr2L 14849271 intron CG15279 - chr2L 14849334 intron CG15279 - chr2L 14849396 intron CG15279 - chr2L_4_14845001 chr2L_14845001 RAL-900_95b 142 chr2L 14849291 14849310 chr2L 14849366 14849409 4 84 2.0 2.5 2.2 1.2 118 chr2L 14849291 intron CG15279 - chr2L 14849350 intron CG15279 - chr2L 14849409 intron CG15279 - chr2L_4_14845001 chr2L_14845001 RAL-900_95b 143 chr2L 14887673 14887695 chr2L 14887771 14887793 4 97 4.0 2.5 3.2 1.0 120 chr2L 14887673 intergenic not near genes chr2L 14887733 intergenic not near genes chr2L 14887793 intergenic not near genes chr2L_4_14885001 chr2L_14885001 RAL-900_95b 144 chr2L 15013144 15013179 chr2L 15013267 15013271 5 113 1.0 4.5 2.8 1.3 127 chr2L 15013144 intergenic CR43856 - chr2L 15013208 intergenic not near genes chr2L 15013271 intergenic not near genes chr2L_5_15010001 chr2L_15010001 RAL-900_95b 145 chr2L 15021425 15021471 chr2L 15021521 15021550 5 82 2.0 3.0 2.5 1.4 125 chr2L 15021425 intron GABA-B-R1 + chr2L 15021488 intron GABA-B-R1 + chr2L 15021550 intron GABA-B-R1 + chr2L_5_15020001 chr2L_15020001 RAL-900_95b 146 chr2L 15031568 15031585 chr2L 15031797 15031805 5 227 4.0 1.5 2.8 1.3 237 chr2L 15031568 intron,exon GABA-B-R1 +,CG31832 - chr2L 15031686 intron,exon GABA-B-R1 +,CG31832 - chr2L 15031805 intron GABA-B-R1 + chr2L_5_15030001 chr2L_15030001 RAL-900_95b 147 chr2L 15044737 15044739 chr2L 15044789 15044802 4 66 1.0 2.0 1.5 1.6 65 chr2L 15044737 intergenic ck - chr2L 15044770 intergenic ck - chr2L 15044802 intergenic ck - chr2L_4_15040001 chr2L_15040001 RAL-900_95b 148 chr2L 15078084 15078096 chr2L 15078157 15078182 4 86 3.0 2.0 2.5 1.1 98 chr2L 15078084 intron CG15270 + chr2L 15078133 intron CG15270 + chr2L 15078182 intron CG15270 + chr2L_4_15075001 chr2L_15075001 RAL-900_95b 149 chr2L 15240219 15240247 chr2L 15240335 15240377 7 114 2.5 1.5 2.0 2.3 158 chr2L 15240219 intron ZnT35C - chr2L 15240298 intron ZnT35C - chr2L 15240377 intron ZnT35C - chr2L_7_15240001 chr2L_15240001 RAL-900_95b 150 chr2L 15309440 15309486 chr2L 15309627 15309652 4 174 1.0 1.5 1.2 1.8 212 chr2L 15309440 intergenic not near genes chr2L 15309546 intergenic not near genes chr2L 15309652 intergenic not near genes chr2L_4_15305001 chr2L_15305001 RAL-900_95b 151 chr2L 15535885 15535910 chr2L 15535978 15535986 4 88 2.5 2.5 2.5 1.1 101 chr2L 15535885 intergenic not near genes chr2L 15535936 intergenic not near genes chr2L 15535986 intergenic not near genes chr2L_4_15535001 chr2L_15535001 RAL-900_95b 152 chr2L 15586396 15586441 chr2L 15593468 15593473 297 11 7062 4.5 2.5 3.5 2.4 7077 chr2L 15586396 intergenic not near genes chr2L 15589934 intergenic not near genes chr2L 15593473 intergenic not near genes chr2L_11_15585001 chr2L_15585001 RAL-900_95b 153 chr2L 15950373 15950413 chr2L 15950464 15950485 6 87 4.0 2.0 3.0 1.5 112 chr2L 15950373 intron beat-Ib - chr2L 15950429 intron beat-Ib - chr2L 15950485 intron beat-Ib - chr2L_6_15950001 chr2L_15950001 RAL-900_95b 154 chr2L 16027377 16027427 chr2L 16027473 16027488 5 86 2.0 5.0 3.5 1.1 111 chr2L 16027377 intron beat-Ic + chr2L 16027432 intron beat-Ic + chr2L 16027488 intron beat-Ic + chr2L_5_16025001 chr2L_16025001 RAL-900_95b 155 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 4 145889 5.0 18.0 11.5 0.3 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_4_16140001 chr2L_16140001 RAL-900_95b 156 chr2L 16098906 16098945 chr2L 16099014 16099023 6 97 0.5 5.5 3.0 1.5 117 chr2L 16098906 intergenic not near genes chr2L 16098964 intergenic not near genes chr2L 16099023 intergenic not near genes chr2L_6_16095001 chr2L_16095001 RAL-900_95b 157 chr2L 16106545 16106578 chr2L 16106675 16106684 4 118 3.5 3.5 3.5 0.9 139 chr2L 16106545 intergenic not near genes chr2L 16106614 intergenic not near genes chr2L 16106684 intergenic not near genes chr2L_4_16105001 chr2L_16105001 RAL-900_95b 158 chr2L 16123468 16123522 chr2L 16123565 16123620 5 98 0.0 3.5 1.8 1.8 152 chr2L 16123468 intergenic not near genes chr2L 16123544 intergenic not near genes chr2L 16123620 intergenic not near genes chr2L_5_16120001 chr2L_16120001 RAL-900_95b 159 chr2L 16243702 16243839 chr2L 16243788 16243929 8 104 3.5 5.5 4.5 1.5 227 chr2L 16243702 exon CG42818 + chr2L 16243816 exon CG42818 + chr2L 16243929 exon CG42818 + chr2L_8_16240001 chr2L_16240001 RAL-900_95b 160 chr2L 16363921 16363974 chr2L 16364187 16364234 4 264 3.0 2.5 2.8 1.1 313 chr2L 16363921 intergenic not near genes chr2L 16364078 intergenic not near genes chr2L 16364234 intergenic not near genes chr2L_4_16360001 chr2L_16360001 RAL-900_95b 161 chr2L 16504998 16505016 chr2L 16505100 16505106 5 100 1.5 0.5 1.0 2.5 108 chr2L 16504998 intron Tpr2 + chr2L 16505052 intron Tpr2 + chr2L 16505106 intron Tpr2 + chr2L_5_16505001 chr2L_16505001 RAL-900_95b 162 chr2L 16654701 16654727 chr2L 16654806 16654809 4 93 6.0 2.5 4.2 0.8 108 chr2L 16654701 intron CG42389 + chr2L 16654755 intron CG42389 + chr2L 16654809 intron CG42389 + chr2L_4_16650001 chr2L_16650001 RAL-900_95b 163 chr2L 16670406 16670442 chr2L 16670498 16670534 5 94 1.5 3.0 2.2 1.6 128 chr2L 16670406 intron Trpgamma - chr2L 16670470 intron Trpgamma - chr2L 16670534 intron Trpgamma - chr2L_5_16670001 chr2L_16670001 RAL-900_95b 164 chr2L 16867035 16867043 chr2L 16867129 16867158 4 110 2.0 2.0 2.0 1.3 123 chr2L 16867035 intergenic not near genes chr2L 16867096 intergenic not near genes chr2L 16867158 intergenic not near genes chr2L_4_16865001 chr2L_16865001 RAL-900_95b 165 chr2L 16958124 16958135 chr2L 16962897 16962936 Doc 4 4783 1.5 2.5 2.0 1.3 4812 chr2L 16958124 intergenic not near genes chr2L 16960530 intergenic not near genes chr2L 16962936 intergenic not near genes chr2L_4_16960001 chr2L_16960001 RAL-900_95b 166 chr2L 17052419 17052443 chr2L 17052530 17052535 5 119 0.5 2.0 1.2 2.3 116 chr2L 17052419 intergenic not near genes chr2L 17052477 intergenic not near genes chr2L 17052535 intergenic not near genes chr2L_5_17050001 chr2L_17050001 RAL-900_95b 167 chr2L 17167552 17167592 chr2L 17167813 17167842 pogo 5 249 1.5 2.0 1.8 1.8 290 chr2L 17167552 intron,intron CG34106 +,beat-IIIa + chr2L 17167697 intron,intron CG34106 +,beat-IIIa + chr2L 17167842 intron,intron CG34106 +,beat-IIIa + chr2L_5_17165001 chr2L_17165001 RAL-900_95b 168 chr2L 17238886 17239064 chr2L 17239028 17239128 8 114 1.5 1.5 1.5 3.2 242 chr2L 17238886 intron beat-IIIc - chr2L 17239007 intron beat-IIIc - chr2L 17239128 intron beat-IIIc - chr2L_8_17235001 chr2L_17235001 RAL-900_95b 169 chr2L 17327892 17327917 chr2L 17327998 17328014 4 101 8.0 4.5 6.2 0.6 122 chr2L 17327892 intergenic not near genes chr2L 17327953 intergenic not near genes chr2L 17328014 intergenic not near genes chr2L_4_17325001 chr2L_17325001 RAL-900_95b 170 chr2L 17397991 17398004 chr2L 17398101 17398114 4 108 3.0 2.5 2.8 1.1 123 chr2L 17397991 intron CLIP-190 + chr2L 17398052 intron CLIP-190 + chr2L 17398114 intron CLIP-190 + chr2L_4_17395001 chr2L_17395001 RAL-900_95b 171 chr2L 17399311 17399344 chr2L 17399420 17399423 7 106 5.5 0.0 2.8 1.8 112 chr2L 17399311 intron CLIP-190 + chr2L 17399367 intron CLIP-190 + chr2L 17399423 intron CLIP-190 + chr2L_7_17395001 chr2L_17395001 RAL-900_95b 172 chr2L 17662757 17662776 chr2L 17662830 17662842 4 71 0.5 1.5 1.0 2.0 85 chr2L 17662757 intron CadN - chr2L 17662800 intron CadN - chr2L 17662842 intron CadN - chr2L_4_17660001 chr2L_17660001 RAL-900_95b 173 chr2L 17741144 17741171 chr2L 17741238 17741271 4 96 5.0 2.0 3.5 0.9 127 chr2L 17741144 intron CadN - chr2L 17741208 intron CadN - chr2L 17741271 intron CadN - chr2L_4_17740001 chr2L_17740001 RAL-900_95b 174 chr2L 17951937 17951981 chr2L 17953414 17953458 hobo 9 1472 3.5 1.5 2.5 2.6 1521 chr2L 17951937 intergenic CR44398 -,CR44397 - chr2L 17952698 intergenic not near genes chr2L 17953458 intergenic not near genes chr2L_9_17950001 chr2L_17950001 RAL-900_95b 175 chr2L 18079798 18079833 chr2L 18079904 18079923 7 102 3.0 4.5 3.8 1.5 125 chr2L 18079798 intron Arr1 + chr2L 18079860 intron Arr1 + chr2L 18079923 intron Arr1 + chr2L_7_18075001 chr2L_18075001 RAL-900_95b 176 chr2L 18264145 18264176 chr2L 18264231 18264268 4 90 1.5 1.0 1.2 1.8 123 chr2L 18264145 intron CG42750 - chr2L 18264206 intron CG42750 - chr2L 18264268 intron CG42750 - chr2L_4_18260001 chr2L_18260001 RAL-900_95b 177 chr2L 18291548 18291559 chr2L 18291625 18291642 5 88 2.5 0.0 1.2 2.3 94 chr2L 18291548 intergenic CG43362 -,CR44693 +,CR44696 - chr2L 18291595 intergenic CR44693 +,CG43362 -,CR44696 - chr2L 18291642 intergenic CR44693 +,CG43362 -,CR44696 - chr2L_5_18290001 chr2L_18290001 RAL-900_95b 178 chr2L 18408020 18408051 chr2L 18412807 18412809 Doc 4 4780 3.0 1.5 2.2 1.2 4789 chr2L 18408020 intergenic not near genes chr2L 18410414 intergenic not near genes chr2L 18412809 intergenic not near genes chr2L_4_18410001 chr2L_18410001 RAL-900_95b 179 chr2L 18423839 18423869 chr2L 18423950 18423970 5 108 2.5 5.5 4.0 1.0 131 chr2L 18423839 intergenic not near genes chr2L 18423904 intergenic not near genes chr2L 18423970 intergenic not near genes chr2L_5_18420001 chr2L_18420001 RAL-900_95b 180 chr2L 18812538 18812553 chr2L 18812850 18812853 5 314 1.0 3.0 2.0 1.7 315 chr2L 18812538 intergenic CG17325 +,CG42305 + chr2L 18812696 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812853 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_5_18810001 chr2L_18810001 RAL-900_95b 181 chr2L 18898394 18898418 chr2L 18898480 18898520 6 90 2.0 1.0 1.5 2.4 126 chr2L 18898394 intergenic not near genes chr2L 18898457 intergenic not near genes chr2L 18898520 intergenic not near genes chr2L_6_18895001 chr2L_18895001 RAL-900_95b 182 chr2L 18902644 18902653 chr2L 18902905 18902929 4 285 2.0 2.5 2.2 1.2 285 chr2L 18902644 intergenic not near genes chr2L 18902786 intergenic not near genes chr2L 18902929 intergenic not near genes chr2L_4_18900001 chr2L_18900001 RAL-900_95b 183 chr2L 19147378 19147403 chr2L 19154409 19154420 297 7 7035 2.5 4.5 3.5 1.6 7042 chr2L 19147378 intron brat + chr2L 19150899 intron brat + chr2L 19154420 intron brat + chr2L_7_19150001 chr2L_19150001 RAL-900_95b 184 chr2L 19405600 19405630 chr2L 19405710 19405740 4 106 4.0 3.0 3.5 0.9 140 chr2L 19405600 intron Pax - chr2L 19405670 intron Pax - chr2L 19405740 intron Pax - chr2L_4_19405001 chr2L_19405001 RAL-900_95b 185 chr2L 19559987 19560039 chr2L 19560260 19560271 9 249 1.5 6.5 4.0 1.8 284 chr2L 19559987 exon Tep5 + chr2L 19560129 exon Tep5 + chr2L 19560271 exon Tep5 + chr2L_9_19560001 chr2L_19560001 RAL-900_95b 186 chr2L 19560818 19560865 chr2L 19560918 19560925 4 74 2.5 1.0 1.8 1.4 107 chr2L 19560818 exon Tep5 + chr2L 19560872 intron Tep5 + chr2L 19560925 exon Tep5 + chr2L_4_19560001 chr2L_19560001 RAL-900_95b 187 chr2L 19620097 19620130 chr2L 19621081 19621104 jockey 5 984 1.0 2.5 1.8 1.8 1007 chr2L 19620097 intron Lar + chr2L 19620600 intron Lar + chr2L 19621104 intron Lar + chr2L_5_19620001 chr2L_19620001 RAL-900_95b 188 chr2L 19638527 19638570 chr2L 19638620 19638634 8 86 3.5 1.5 2.5 2.3 107 chr2L 19638527 intron Lar + chr2L 19638580 intron Lar + chr2L 19638634 intron Lar + chr2L_8_19635001 chr2L_19635001 RAL-900_95b 189 chr2L 19652549 19652604 chr2L 19674005 19674057 opus 9 21435 0.5 2.5 1.5 3.6 21508 chr2L 19652549 intron Lar + chr2L 19663303 intron Lar + chr2L 19674057 intron Lar + chr2L_9_19660001 chr2L_19660001 RAL-900_95b 190 chr2L 19703552 19703569 chr2L 19712671 19712695 roo 5 9131 4.0 2.5 3.2 1.2 9143 chr2L 19703552 intron Lar + chr2L 19708124 intron Lar + chr2L 19712695 intron Lar + chr2L_5_19705001 chr2L_19705001 RAL-900_95b 191 chr2L 19773143 19773188 chr2L 19773250 19773250 8 96 3.5 1.5 2.5 2.3 107 chr2L 19773143 intergenic not near genes chr2L 19773196 intergenic not near genes chr2L 19773250 intergenic not near genes chr2L_8_19770001 chr2L_19770001 RAL-900_95b 192 chr2L 19846268 19846276 chr2L 19846348 19846377 4 87 0.5 9.0 4.8 0.7 109 chr2L 19846268 intron sick + chr2L 19846322 intron sick + chr2L 19846377 intron sick + chr2L_4_19845001 chr2L_19845001 RAL-900_95b 193 chr2L 19879004 19879009 chr2L 19879198 19879238 4 220 6.5 5.5 6.0 0.6 234 chr2L 19879004 intron sick + chr2L 19879121 intron sick + chr2L 19879238 intron sick + chr2L_4_19875001 chr2L_19875001 RAL-900_95b 194 chr2L 20079502 20079546 chr2L 20079635 20079652 9 118 1.0 1.5 1.2 4.1 150 chr2L 20079502 intron,intron neb +,fok - chr2L 20079577 intron,intron neb +,fok - chr2L 20079652 intron,intron neb +,fok - chr2L_9_20075001 chr2L_20075001 RAL-900_95b 195 chr2L 20272100 20272111 chr2L 20282831 20282842 copia 4 10731 6.5 2.5 4.5 0.7 10742 chr2L 20272100 intergenic not near genes chr2L 20277471 intergenic not near genes chr2L 20282842 intergenic not near genes chr2L_4_20275001 chr2L_20275001 RAL-900_95b 196 chr2L 20302987 20303008 chr2L 20303097 20303103 5 107 4.0 1.0 2.5 1.4 116 chr2L 20302987 intergenic not near genes chr2L 20303045 intergenic not near genes chr2L 20303103 intergenic not near genes chr2L_5_20300001 chr2L_20300001 RAL-900_95b 197 chr2L 20303164 20303187 chr2L 20310627 20310635 blood 4 7463 0.0 2.0 1.0 2.0 7471 chr2L 20303164 intergenic not near genes chr2L 20306900 intergenic not near genes chr2L 20310635 intergenic not near genes chr2L_4_20305001 chr2L_20305001 RAL-900_95b 198 chr2L 20383421 20383468 chr2L 20383533 20383538 4 100 3.0 1.0 2.0 1.3 117 chr2L 20383421 intergenic not near genes chr2L 20383480 intergenic not near genes chr2L 20383538 intergenic not near genes chr2L_4_20380001 chr2L_20380001 RAL-900_95b 199 chr2L 20549112 20549152 chr2L 20549214 20549229 6 94 5.5 1.0 3.2 1.4 117 chr2L 20549112 intergenic not near genes chr2L 20549170 intergenic not near genes chr2L 20549229 intergenic not near genes chr2L_6_20545001 chr2L_20545001 RAL-900_95b 200 chr2L 20553169 20553221 chr2L 20553265 20553281 7 89 1.5 2.5 2.0 2.3 112 chr2L 20553169 intergenic not near genes chr2L 20553225 intergenic not near genes chr2L 20553281 intergenic not near genes chr2L_7_20550001 chr2L_20550001 RAL-900_95b 201 chr2L 20568655 20568685 chr2L 20569058 20569075 X-element 6 397 4.5 3.0 3.8 1.2 420 chr2L 20568655 intron CR45347 + chr2L 20568865 intron CR45347 + chr2L 20569075 intron CR45347 + chr2L_6_20565001 chr2L_20565001 RAL-900_95b 202 chr2L 20602725 20602743 chr2L 20602825 20602851 4 106 0.5 1.0 0.8 2.2 126 chr2L 20602725 intron CR44909 - chr2L 20602788 intron CR44909 - chr2L 20602851 intron CR44909 - chr2L_4_20600001 chr2L_20600001 RAL-900_95b 203 chr2L 20668667 20668723 chr2L 20668763 20668791 10 78 2.0 1.0 1.5 4.0 124 chr2L 20668667 intron CG31678 - chr2L 20668729 intron CG31678 - chr2L 20668791 intron CG31678 - chr2L_10_20665001 chr2L_20665001 RAL-900_95b 204 chr2L 20835791 20835840 chr2L 20836528 20836547 Quasimodo 10 728 2.5 3.0 2.8 2.6 756 chr2L 20835791 5` UTR Oseg5 - chr2L 20836169 intergenic Oseg5 -,Spn38F - chr2L 20836547 intergenic Spn38F - chr2L_10_20835001 chr2L_20835001 RAL-900_95b 205 chr2L 20862585 20862589 chr2L 20862702 20862705 4 117 0.0 10.0 5.0 0.7 120 chr2L 20862585 intergenic not near genes chr2L 20862645 intergenic not near genes chr2L 20862705 intergenic not near genes chr2L_4_20860001 chr2L_20860001 RAL-900_95b 206 chr2L 20967908 20967960 chr2L 20968021 20968038 8 96 2.5 3.0 2.8 2.1 130 chr2L 20967908 intron CG42238 - chr2L 20967973 intron CG42238 - chr2L 20968038 intron CG42238 - chr2L_8_20965001 chr2L_20965001 RAL-900_95b 207 chr2L 20976653 20976679 chr2L 20981455 20981478 X-element 9 4810 2.5 5.5 4.0 1.8 4825 chr2L 20976653 intron CG42238 - chr2L 20979066 intron CG42238 - chr2L 20981478 intron CG42238 - chr2L_9_20975001 chr2L_20975001 RAL-900_95b 208 chr2L 21041143 21041168 chr2L 21049394 21049414 Tirant 5 8252 2.5 2.0 2.2 1.6 8271 chr2L 21041143 intron CG42238 - chr2L 21045278 intron CG42238 - chr2L 21049414 intron CG42238 - chr2L_5_21045001 chr2L_21045001 RAL-900_95b 209 chr2L 21113695 21113700 chr2L 21113787 21113802 4 104 10.0 4.0 7.0 0.5 107 chr2L 21113695 intron Nhe2 + chr2L 21113748 intron Nhe2 + chr2L 21113802 intron Nhe2 + chr2L_4_21110001 chr2L_21110001 RAL-900_95b 210 chr2L 21113708 21113714 chr2L 21113778 21113827 4 91 7.5 2.0 4.8 0.7 119 chr2L 21113708 intron Nhe2 + chr2L 21113768 intron Nhe2 + chr2L 21113827 intron Nhe2 + chr2L_4_21110001 chr2L_21110001 RAL-900_95b 211 chr2L 21169829 21169856 chr2L 21169931 21169958 4 99 9.5 4.0 6.8 0.5 129 chr2L 21169829 intron Acon + chr2L 21169894 intron Acon + chr2L 21169958 intron Acon + chr2L_4_21165001 chr2L_21165001 RAL-900_95b 212 chr2L 21286589 21286632 chr2L 21286681 21286695 11 79 2.0 7.0 4.5 2.0 106 chr2L 21286589 exon Mio - chr2L 21286642 intron Mio - chr2L 21286695 intron Mio - chr2L_11_21285001 chr2L_21285001 RAL-900_95b 213 chr2L 21347562 21347583 chr2L 21355021 21355046 blood 7 7470 2.5 5.5 4.0 1.4 7484 chr2L 21347562 intron Tsp39D + chr2L 21351304 intron Tsp39D + chr2L 21355046 intron Tsp39D + chr2L_7_21350001 chr2L_21350001 RAL-900_95b 214 chr2L 21754654 21754690 chr2L 21754739 21754791 8 85 5.0 2.0 3.5 1.8 137 chr2L 21754654 intron step - chr2L 21754722 intron step - chr2L 21754791 intron step - chr2L_8_21750001 chr2L_21750001 RAL-900_95b 215 chr2L 21855469 21855505 chr2L 21855565 21855592 6 94 3.0 3.0 3.0 1.5 123 chr2L 21855469 intron CR44917 + chr2L 21855530 intron CR44917 + chr2L 21855592 intron CR44917 + chr2L_6_21855001 chr2L_21855001 RAL-900_95b 216 chr2L 22164985 22164999 chr2L 22165094 22165131 4 123 2.5 1.5 2.0 1.3 146 chr2L 22164985 3` UTR CG42748 + chr2L 22165058 3` UTR CG42748 + chr2L 22165131 3` UTR CG42748 + chr2L_4_22165001 chr2L_22165001 RAL-900_95b 217 chr2L 22558397 22558416 chr2L 22558705 22558742 5 320 2.5 4.0 3.2 1.2 345 chr2L 22558397 intergenic not near genes chr2L 22558570 intergenic not near genes chr2L 22558742 intergenic not near genes chr2L_5_22555001 chr2L_22555001 RAL-900_95b 218 chr2L 22581953 22581997 chr2L 22583762 22583774 S-element 4 1801 1.5 2.5 2.0 1.3 1821 chr2L 22581953 intron CG17494 + chr2L 22582864 intron CG17494 + chr2L 22583774 intron CG17494 + chr2L_4_22580001 chr2L_22580001 RAL-900_95b 219 chr2L 22719424 22719466 chr2L 22727567 22727596 gypsy2 6 8134 3.0 0.5 1.8 2.1 8172 chr2L 22719424 intron CG40006 - chr2L 22723510 intron CG40006 - chr2L 22727596 intron CG40006 - chr2L_6_22720001 chr2L_22720001 RAL-900_95b 220 chr2L 22776399 22776450 chr2L 22778208 22778254 S-element 8 1803 5.0 3.0 4.0 1.6 1855 chr2L 22776399 intergenic not near genes chr2L 22777326 intergenic not near genes chr2L 22778254 intergenic not near genes chr2L_8_22775001 chr2L_22775001 RAL-900_95b 221 chr2L 22941247 22941276 chr2L 22941331 22941346 8 87 2.5 5.0 3.8 1.7 99 chr2L 22941247 3` UTR lt + chr2L 22941296 3` UTR lt + chr2L 22941346 3` UTR lt + chr2L_8_22940001 chr2L_22940001 RAL-900_95b 222 chr2L 23006524 23006536 chr2L 23007185 23007202 Osvaldo 4 664 3.0 3.5 3.2 1.0 678 chr2L 23006524 intron Cht3 - chr2L 23006863 intron Cht3 - chr2L 23007202 intron Cht3 - chr2L_4_23005001 chr2L_23005001 RAL-900_95b 223 chr2R 529336 529351 chr2R 537948 537961 Max-element 4 8608 2.0 4.5 3.2 1.0 8625 chr2R 529336 intron CG40378 + chr2R 533648 intron CG40378 + chr2R 537961 intron CG40378 + chr2R_4_530001 chr2R_530001 RAL-900_95b 224 chr2R 1320201 1320201 chr2R 11463556 11463557 invader1 5 10143355 5.0 11.5 8.2 0.5 10143356 chr2R 1320201 intergenic not near genes chr2R 6391879 intergenic not near genes chr2R 11463557 3` UTR E(Pc) + chr2R_5_6390001 chr2R_6390001 RAL-900_95b 225 chr2R 1320201 1320204 chr2R 21358403 21358403 4 20038200 4.5 6.0 5.2 0.6 20038202 chr2R 1320201 intergenic not near genes chr2R 11339302 exon zetaTry - chr2R 21358403 intron cv-2 - chr2R_4_11335001 chr2R_11335001 RAL-900_95b 226 chr2R 1516589 1516597 chr2R 1521337 1521345 1731 6 4748 42.0 29.5 35.8 0.2 4756 chr2R 1516589 exon Maf1 - chr2R 1518967 intron Maf1 - chr2R 1521345 5` UTR Maf1 - chr2R_6_1515001 chr2R_1515001 RAL-900_95b 227 chr2R 2498966 2499018 chr2R 2508132 2508150 roo 8 9141 1.5 2.5 2.0 2.7 9184 chr2R 2498966 intron MFS17 - chr2R 2503558 intron MFS17 - chr2R 2508150 intron MFS17 - chr2R_8_2500001 chr2R_2500001 RAL-900_95b 228 chr2R 2846584 2846605 chr2R 2846694 2846695 5 106 6.5 8.0 7.2 0.6 111 chr2R 2846584 intron CG41378 - chr2R 2846640 intron CG41378 - chr2R 2846695 exon CG41378 - chr2R_5_2845001 chr2R_2845001 RAL-900_95b 229 chr2R 2846613 2846620 chr2R 2846678 2846689 4 81 6.5 3.0 4.8 0.7 76 chr2R 2846613 intron CG41378 - chr2R 2846651 intron CG41378 - chr2R 2846689 exon CG41378 - chr2R_4_2845001 chr2R_2845001 RAL-900_95b 230 chr2R 4622961 4622985 chr2R 4624110 4624130 1360 7 1152 1.0 2.5 1.8 2.5 1169 chr2R 4622961 intergenic CR44101 - chr2R 4623546 intergenic not near genes chr2R 4624130 intergenic not near genes chr2R_7_4620001 chr2R_4620001 RAL-900_95b 231 chr2R 4624624 4624643 chr2R 4626549 4626566 Bica 4 1920 8.5 4.0 6.2 0.6 1942 chr2R 4624624 intergenic not near genes chr2R 4625595 intergenic not near genes chr2R 4626566 intergenic not near genes chr2R_4_4625001 chr2R_4625001 RAL-900_95b 232 chr2R 4624646 4624674 chr2R 4626544 4626557 Bica 4 1900 5.0 3.0 4.0 0.8 1911 chr2R 4624646 intergenic not near genes chr2R 4625602 intergenic not near genes chr2R 4626557 intergenic not near genes chr2R_4_4625001 chr2R_4625001 RAL-900_95b 233 chr2R 4634158 4634171 chr2R 4634232 4634237 4 78 8.5 5.5 7.0 0.5 79 chr2R 4634158 intergenic not near genes chr2R 4634198 intergenic not near genes chr2R 4634237 intergenic not near genes chr2R_4_4630001 chr2R_4630001 RAL-900_95b 234 chr2R 4750372 4750377 chr2R 4751502 4751539 1360 4 1138 1.0 6.0 3.5 0.9 1167 chr2R 4750372 intron conu + chr2R 4750956 intron conu + chr2R 4751539 intron conu + chr2R_4_4750001 chr2R_4750001 RAL-900_95b 235 chr2R 4820923 4820936 chr2R 4821004 4821032 4 88 1.5 4.0 2.8 1.1 109 chr2R 4820923 intron CG17528 - chr2R 4820978 intron CG17528 - chr2R 4821032 intron CG17528 - chr2R_4_4820001 chr2R_4820001 RAL-900_95b 236 chr2R 4820941 4820946 chr2R 4820999 4821042 4 76 1.5 3.5 2.5 1.1 101 chr2R 4820941 intron CG17528 - chr2R 4820992 intron CG17528 - chr2R 4821042 intron CG17528 - chr2R_4_4820001 chr2R_4820001 RAL-900_95b 237 chr2R 4940941 4940990 chr2R 4943411 4943425 8 2445 19.0 2.5 10.8 0.7 2484 chr2R 4940941 intron Ir41a + chr2R 4942183 intron Ir41a + chr2R 4943425 intron Ir41a + chr2R_8_4940001 chr2R_4940001 RAL-900_95b 238 chr2R 5019263 5019296 chr2R 5019369 5019372 4 90 2.0 5.0 3.5 0.9 109 chr2R 5019263 intron Ir41a + chr2R 5019318 intron Ir41a + chr2R 5019372 intron Ir41a + chr2R_4_5015001 chr2R_5015001 RAL-900_95b 239 chr2R 5209761 5209812 chr2R 5210313 5210365 10 537 3.0 3.5 3.2 2.4 604 chr2R 5209761 intron Nipped-A - chr2R 5210063 intron Nipped-A - chr2R 5210365 intron Nipped-A - chr2R_10_5210001 chr2R_5210001 RAL-900_95b 240 chr2R 5237343 5237373 chr2R 5237445 5237472 6 100 2.0 7.0 4.5 1.1 129 chr2R 5237343 intron Nipped-A - chr2R 5237408 intron Nipped-A - chr2R 5237472 intron Nipped-A - chr2R_6_5235001 chr2R_5235001 RAL-900_95b 241 chr2R 5417990 5418027 chr2R 5420625 5420657 Burdock 9 2633 4.5 4.0 4.2 1.7 2667 chr2R 5417990 intron laccase2 + chr2R 5419324 intron laccase2 + chr2R 5420657 intron laccase2 + chr2R_9_5415001 chr2R_5415001 RAL-900_95b 242 chr2R 5475612 5475620 chr2R 5475690 5475734 4 104 1.5 4.5 3.0 1.0 122 chr2R 5475612 intron CG30440 - chr2R 5475673 intron CG30440 - chr2R 5475734 intron CG30440 - chr2R_4_5475001 chr2R_5475001 RAL-900_95b 243 chr2R 5509537 5509546 chr2R 5509613 5509662 4 88 4.0 2.0 3.0 1.0 125 chr2R 5509537 intron CG30438 + chr2R 5509600 intron CG30438 + chr2R 5509662 intron CG30438 + chr2R_4_5505001 chr2R_5505001 RAL-900_95b 244 chr2R 5581403 5581424 chr2R 5627597 5627598 10 46203 0.0 3.5 1.8 3.6 46195 chr2R 5581403 intergenic not near genes chr2R 5604500 exon Fis1 - chr2R 5627598 intergenic not near genes chr2R_10_5600001 chr2R_5600001 RAL-900_95b 245 chr2R 5714444 5714461 chr2R 5714617 5714623 8 168 4.0 1.0 2.5 2.3 179 chr2R 5714444 intron ap - chr2R 5714534 intron ap - chr2R 5714623 intron ap - chr2R_8_5710001 chr2R_5710001 RAL-900_95b 246 chr2R 5790446 5790494 chr2R 5790551 5790599 9 98 2.5 2.0 2.2 2.8 153 chr2R 5790446 intergenic not near genes chr2R 5790522 intergenic not near genes chr2R 5790599 intergenic not near genes chr2R_9_5790001 chr2R_5790001 RAL-900_95b 247 chr2R 5863338 5863379 chr2R 5867289 5867293 4 3928 11.5 7.5 9.5 0.4 3955 chr2R 5863338 intergenic not near genes chr2R 5865316 intergenic not near genes chr2R 5867293 intergenic not near genes chr2R_4_5865001 chr2R_5865001 RAL-900_95b 248 chr2R 5863208 5863251 chr2R 5867337 5867346 6 4104 16.5 7.5 12.0 0.5 4138 chr2R 5863208 intergenic not near genes chr2R 5865277 intergenic not near genes chr2R 5867346 intergenic not near genes chr2R_6_5865001 chr2R_5865001 RAL-900_95b 249 chr2R 5869276 5869306 chr2R 5874354 5874366 flea 7 5073 7.5 3.5 5.5 1.1 5090 chr2R 5869276 intergenic not near genes chr2R 5871821 intergenic not near genes chr2R 5874366 intergenic not near genes chr2R_7_5870001 chr2R_5870001 RAL-900_95b 250 chr2R 5878906 5878934 chr2R 5879006 5879008 6 92 7.0 4.0 5.5 0.9 102 chr2R 5878906 intergenic CG44438 - chr2R 5878957 intergenic CG44438 - chr2R 5879008 intergenic CG44438 - chr2R_6_5875001 chr2R_5875001 RAL-900_95b 251 chr2R 5885346 5885378 chr2R 5885495 5885525 6 148 2.0 1.0 1.5 2.4 179 chr2R 5885346 5` UTR CR44125 + chr2R 5885436 5` UTR CR44125 + chr2R 5885525 5` UTR CR44125 + chr2R_6_5885001 chr2R_5885001 RAL-900_95b 252 chr2R 6016770 6016819 chr2R 6016874 6016887 10 95 3.0 5.5 4.2 1.9 117 chr2R 6016770 intergenic not near genes chr2R 6016828 intergenic not near genes chr2R 6016887 intergenic not near genes chr2R_10_6015001 chr2R_6015001 RAL-900_95b 253 chr2R 6129306 6129343 chr2R 6129404 6129441 9 95 3.0 2.5 2.8 2.4 135 chr2R 6129306 intron EcR - chr2R 6129374 intron EcR - chr2R 6129441 intron EcR - chr2R_9_6125001 chr2R_6125001 RAL-900_95b 254 chr2R 6144408 6144428 chr2R 6144497 6144497 4 85 4.0 4.0 4.0 0.8 89 chr2R 6144408 intron EcR - chr2R 6144452 intron EcR - chr2R 6144497 intron EcR - chr2R_4_6140001 chr2R_6140001 RAL-900_95b 255 chr2R 6178100 6178141 chr2R 6178246 6178266 7 132 1.5 2.5 2.0 2.3 166 chr2R 6178100 intergenic not near genes chr2R 6178183 intergenic not near genes chr2R 6178266 intergenic not near genes chr2R_7_6175001 chr2R_6175001 RAL-900_95b 256 chr2R 6579753 6579795 chr2R 6584859 6584901 flea 9 5095 5.0 2.5 3.8 1.9 5148 chr2R 6579753 intron jing + chr2R 6582327 intron jing + chr2R 6584901 intron jing + chr2R_9_6580001 chr2R_6580001 RAL-900_95b 257 chr2R 6699574 6699619 chr2R 6699679 6699718 8 95 5.5 5.5 5.5 1.2 144 chr2R 6699574 intergenic Rab2 + chr2R 6699646 intergenic Rab2 + chr2R 6699718 intergenic Rab2 + chr2R_8_6695001 chr2R_6695001 RAL-900_95b 258 chr2R 6706963 6706993 chr2R 6707240 6707250 4 270 5.0 3.0 4.0 0.8 287 chr2R 6706963 intron,intron CG3409 -,CG45092 - chr2R 6707106 intron,intron CG3409 -,CG45092 - chr2R 6707250 intron,intron,3` UTR CG3409 -,CG45092 -,mir-4975 - chr2R_4_6705001 chr2R_6705001 RAL-900_95b 259 chr2R 6952153 6952169 chr2R 6959753 6959769 opus 4 7600 3.0 3.5 3.2 1.0 7616 chr2R 6952153 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955961 intron,intron mim -,CheB42c - chr2R 6959769 intron,intron mim -,CheB42c - chr2R_4_6955001 chr2R_6955001 RAL-900_95b 260 chr2R 6964144 6964316 chr2R 6964235 6964368 15 88 1.5 2.5 2.0 5.0 224 chr2R 6964144 intron,intron mim -,CheB42c - chr2R 6964256 intron,intron mim -,CheB42c - chr2R 6964368 intron,intron mim -,CheB42c - chr2R_15_6960001 chr2R_6960001 RAL-900_95b 261 chr2R 7173798 7173813 chr2R 7174041 7174085 4 255 3.0 3.0 3.0 1.0 287 chr2R 7173798 intron pk + chr2R 7173942 intron pk + chr2R 7174085 intron pk + chr2R_4_7170001 chr2R_7170001 RAL-900_95b 262 chr2R 7196567 7196593 chr2R 7201362 7201386 F-element 4 4794 3.0 1.0 2.0 1.3 4819 chr2R 7196567 intron pk + chr2R 7198976 intron pk + chr2R 7201386 intron pk + chr2R_4_7195001 chr2R_7195001 RAL-900_95b 263 chr2R 7328143 7328153 chr2R 7328238 7328265 6 112 2.5 2.0 2.2 1.9 122 chr2R 7328143 intron,intron Dscam1 -,CR45129 + chr2R 7328204 intron,intron Dscam1 -,CR45129 + chr2R 7328265 intron,intron Dscam1 -,CR45129 + chr2R_6_7325001 chr2R_7325001 RAL-900_95b 264 chr2R 7417893 7418164 chr2R 7417999 7418243 6 90 2.0 6.0 4.0 1.2 350 chr2R 7417893 intergenic not near genes chr2R 7418068 intergenic not near genes chr2R 7418243 intergenic not near genes chr2R_6_7415001 chr2R_7415001 RAL-900_95b 265 chr2R 7629270 7629317 chr2R 7629410 7629415 7 124 2.5 1.0 1.8 2.5 145 chr2R 7629270 intron CG43340 + chr2R 7629342 intron CG43340 + chr2R 7629415 intron CG43340 + chr2R_7_7625001 chr2R_7625001 RAL-900_95b 266 chr2R 7642858 7642879 chr2R 7642953 7642959 6 95 6.5 4.5 5.5 0.9 101 chr2R 7642858 intron CG43340 + chr2R 7642908 intron CG43340 + chr2R 7642959 intron CG43340 + chr2R_6_7640001 chr2R_7640001 RAL-900_95b 267 chr2R 7642883 7642887 chr2R 7642950 7642969 5 71 5.5 3.5 4.5 0.9 86 chr2R 7642883 intron CG43340 + chr2R 7642926 intron CG43340 + chr2R 7642969 intron CG43340 + chr2R_5_7640001 chr2R_7640001 RAL-900_95b 268 chr2R 7787068 7787114 chr2R 7787169 7787186 5 89 3.0 2.0 2.5 1.4 118 chr2R 7787068 intron CanB2 + chr2R 7787127 intron CanB2 + chr2R 7787186 intron CanB2 + chr2R_5_7785001 chr2R_7785001 RAL-900_95b 269 chr2R 7952137 7952160 chr2R 7952418 7952424 4 279 3.0 3.0 3.0 1.0 287 chr2R 7952137 intron CG14764 - chr2R 7952280 intron CG14764 - chr2R 7952424 intron CG14764 - chr2R_4_7950001 chr2R_7950001 RAL-900_95b 270 chr2R 8018125 8018139 chr2R 8018213 8018232 7 95 8.0 6.0 7.0 0.9 107 chr2R 8018125 intergenic not near genes chr2R 8018178 intergenic not near genes chr2R 8018232 intergenic not near genes chr2R_7_8015001 chr2R_8015001 RAL-900_95b 271 chr2R 8026790 8026829 chr2R 8026886 8026925 4 96 4.0 2.0 3.0 1.0 135 chr2R 8026790 intergenic CR45267 + chr2R 8026858 intergenic CR45267 + chr2R 8026925 intergenic CR45267 + chr2R_4_8025001 chr2R_8025001 RAL-900_95b 272 chr2R 8105915 8105963 chr2R 8106026 8106043 4 94 0.5 0.5 0.5 2.7 128 chr2R 8105915 5` UTR Cul4 - chr2R 8105979 intron Cul4 - chr2R 8106043 5` UTR Cul4 - chr2R_4_8105001 chr2R_8105001 RAL-900_95b 273 chr2R 8159134 8159183 chr2R 8159650 8159651 5 499 3.0 2.5 2.8 1.3 517 chr2R 8159134 intergenic CG8708 - chr2R 8159392 intergenic CG8708 - chr2R 8159651 exon CG8708 - chr2R_5_8155001 chr2R_8155001 RAL-900_95b 274 chr2R 8330849 8330894 chr2R 8331355 8331370 roo 7 495 3.5 4.5 4.0 1.4 521 chr2R 8330849 intron pdm3 + chr2R 8331110 intron pdm3 + chr2R 8331370 intron pdm3 + chr2R_7_8330001 chr2R_8330001 RAL-900_95b 275 chr2R 8368188 8368212 chr2R 8368263 8368302 4 86 1.5 6.0 3.8 0.8 114 chr2R 8368188 intron pdm3 + chr2R 8368245 intron pdm3 + chr2R 8368302 intron pdm3 + chr2R_4_8365001 chr2R_8365001 RAL-900_95b 276 chr2R 8566042 8566054 chr2R 8566983 8567015 1360 5 954 5.0 0.5 2.8 1.3 973 chr2R 8566042 5` UTR Cyp6a14 - chr2R 8566528 5` UTR Cyp6a14 - chr2R 8567015 5` UTR Cyp6a14 - chr2R_5_8565001 chr2R_8565001 RAL-900_95b 277 chr2R 8722773 8722780 chr2R 8723003 8723019 pogo 4 242 3.5 0.0 1.8 1.4 246 chr2R 8722773 intron CG14767 - chr2R 8722896 intron CG14767 - chr2R 8723019 intron CG14767 - chr2R_4_8720001 chr2R_8720001 RAL-900_95b 278 chr2R 9227884 9227890 chr2R 9227958 9227997 7 85 6.0 4.0 5.0 1.2 113 chr2R 9227884 3` UTR hig - chr2R 9227940 3` UTR hig - chr2R 9227997 3` UTR hig - chr2R_7_9225001 chr2R_9225001 RAL-900_95b 279 chr2R 9480083 9480107 chr2R 9490609 9490612 roo 7 10536 5.0 7.0 6.0 1.0 10529 chr2R 9480083 intergenic not near genes chr2R 9485348 intergenic not near genes chr2R 9490612 intergenic not near genes chr2R_7_9485001 chr2R_9485001 RAL-900_95b 280 chr2R 9726615 9726642 chr2R 9734161 9734203 17.6 10 7561 4.0 4.0 4.0 2.0 7588 chr2R 9726615 intron sqa - chr2R 9730409 intron sqa - chr2R 9734203 intron sqa - chr2R_10_9730001 chr2R_9730001 RAL-900_95b 281 chr2R 9807411 9807462 chr2R 9807574 9807620 4 148 0.0 2.0 1.0 2.0 209 chr2R 9807411 intergenic not near genes chr2R 9807516 intergenic not near genes chr2R 9807620 intergenic not near genes chr2R_4_9805001 chr2R_9805001 RAL-900_95b 282 chr2R 9935026 9935057 chr2R 9935128 9935138 9 99 2.5 5.5 4.0 1.8 112 chr2R 9935026 intron Mef2 - chr2R 9935082 intron Mef2 - chr2R 9935138 intron Mef2 - chr2R_9_9935001 chr2R_9935001 RAL-900_95b 283 chr2R 10005544 10005580 chr2R 10005658 10005669 6 104 4.5 2.0 3.2 1.4 125 chr2R 10005544 intron Pka-R2 - chr2R 10005606 intron Pka-R2 - chr2R 10005669 intron Pka-R2 - chr2R_6_10005001 chr2R_10005001 RAL-900_95b 284 chr2R 10047826 10047838 chr2R 10047894 10047911 5 82 6.0 2.5 4.2 1.0 85 chr2R 10047826 intron oys - chr2R 10047868 intron oys - chr2R 10047911 intron oys - chr2R_5_10045001 chr2R_10045001 RAL-900_95b 285 chr2R 10053512 10053549 chr2R 10053633 10053659 8 116 4.5 5.5 5.0 1.3 147 chr2R 10053512 intron magu + chr2R 10053586 intron magu + chr2R 10053659 intron magu + chr2R_8_10050001 chr2R_10050001 RAL-900_95b 286 chr2R 10132186 10132217 chr2R 10132271 10132281 5 81 2.0 2.5 2.2 1.6 95 chr2R 10132186 intron gem + chr2R 10132234 intron gem + chr2R 10132281 intron gem + chr2R_5_10130001 chr2R_10130001 RAL-900_95b 287 chr2R 10160530 10160553 chr2R 10160637 10160661 5 108 6.5 4.5 5.5 0.8 131 chr2R 10160530 intron KCNQ - chr2R 10160596 intron KCNQ - chr2R 10160661 intron KCNQ - chr2R_5_10160001 chr2R_10160001 RAL-900_95b 288 chr2R 10160564 10160572 chr2R 10160632 10160680 7 98 3.5 4.0 3.8 1.5 116 chr2R 10160564 intron KCNQ - chr2R 10160622 intron KCNQ - chr2R 10160680 intron KCNQ - chr2R_7_10160001 chr2R_10160001 RAL-900_95b 289 chr2R 10171125 10171131 chr2R 10171199 10171235 4 88 2.0 3.5 2.8 1.1 110 chr2R 10171125 intron KCNQ - chr2R 10171180 intron KCNQ - chr2R 10171235 intron KCNQ - chr2R_4_10170001 chr2R_10170001 RAL-900_95b 290 chr2R 10193208 10193219 chr2R 10193311 10193323 5 104 4.5 4.5 4.5 0.9 115 chr2R 10193208 intergenic not near genes chr2R 10193266 intergenic not near genes chr2R 10193323 intergenic not near genes chr2R_5_10190001 chr2R_10190001 RAL-900_95b 291 chr2R 10203621 10203660 chr2R 10203726 10203745 6 93 4.0 3.0 3.5 1.3 124 chr2R 10203621 intergenic not near genes chr2R 10203683 intergenic not near genes chr2R 10203745 intergenic not near genes chr2R_6_10200001 chr2R_10200001 RAL-900_95b 292 chr2R 10251379 10251400 chr2R 10251442 10251464 5 78 5.5 3.5 4.5 0.9 85 chr2R 10251379 intron,intron CG12913 +,Syb - chr2R 10251422 intron,intron CG12913 +,Syb - chr2R 10251464 intron,intron CG12913 +,Syb - chr2R_5_10250001 chr2R_10250001 RAL-900_95b 293 chr2R 10313301 10313324 chr2R 10313409 10313431 4 106 3.0 4.0 3.5 0.9 130 chr2R 10313301 intergenic not near genes chr2R 10313366 intergenic not near genes chr2R 10313431 intergenic Ndg + chr2R_4_10310001 chr2R_10310001 RAL-900_95b 294 chr2R 10313330 10313346 chr2R 10313402 10313419 6 81 3.0 4.0 3.5 1.3 89 chr2R 10313330 intergenic not near genes chr2R 10313374 intergenic not near genes chr2R 10313419 intergenic Ndg + chr2R_6_10310001 chr2R_10310001 RAL-900_95b 295 chr2R 10352681 10352704 chr2R 10352753 10352801 5 73 1.0 4.0 2.5 1.4 120 chr2R 10352681 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352741 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352801 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_5_10350001 chr2R_10350001 RAL-900_95b 296 chr2R 10469007 10469030 chr2R 10469148 10469161 6 136 3.0 3.0 3.0 1.5 154 chr2R 10469007 intron CG11777 + chr2R 10469084 intron CG11777 + chr2R 10469161 intron CG11777 + chr2R_6_10465001 chr2R_10465001 RAL-900_95b 297 chr2R 10469031 10469053 chr2R 10469147 10469169 6 113 2.0 2.5 2.2 1.9 138 chr2R 10469031 intron CG11777 + chr2R 10469100 intron CG11777 + chr2R 10469169 intron CG11777 + chr2R_6_10465001 chr2R_10465001 RAL-900_95b 298 chr2R 10757675 10757715 chr2R 10757782 10757822 6 100 1.5 1.0 1.2 2.7 147 chr2R 10757675 intron CG33144 - chr2R 10757748 intron CG33144 - chr2R 10757822 intron CG33144 - chr2R_6_10755001 chr2R_10755001 RAL-900_95b 299 chr2R 10771014 10771027 chr2R 10771080 10771128 6 87 1.0 4.0 2.5 1.7 114 chr2R 10771014 intron CG33144 - chr2R 10771071 intron CG33144 - chr2R 10771128 intron CG33144 - chr2R_6_10770001 chr2R_10770001 RAL-900_95b 300 chr2R 11134123 11134143 chr2R 11134353 11134369 pogo 4 236 2.5 2.5 2.5 1.1 246 chr2R 11134123 intergenic not near genes chr2R 11134246 intergenic not near genes chr2R 11134369 intergenic not near genes chr2R_4_11130001 chr2R_11130001 RAL-900_95b 301 chr2R 11179268 11179291 chr2R 11179367 11179370 4 96 3.0 6.5 4.8 0.7 102 chr2R 11179268 intron shn + chr2R 11179319 intron shn + chr2R 11179370 intron shn + chr2R_4_11175001 chr2R_11175001 RAL-900_95b 302 chr2R 11207806 11207845 chr2R 11208019 11208034 BS 5 195 4.0 8.5 6.2 0.7 228 chr2R 11207806 intron shn + chr2R 11207920 intron shn + chr2R 11208034 intron shn + chr2R_5_11205001 chr2R_11205001 RAL-900_95b 303 chr2R 11415531 11415550 chr2R 11418665 11418689 opus 8 3140 2.0 0.5 1.2 3.6 3158 chr2R 11415531 intron Drip - chr2R 11417110 intron Drip - chr2R 11418689 intron Drip - chr2R_8_11415001 chr2R_11415001 RAL-900_95b 304 chr2R 11472645 11472679 chr2R 11473844 11473861 pogo 10 1198 3.0 4.0 3.5 2.2 1216 chr2R 11472645 intergenic not near genes chr2R 11473253 intergenic not near genes chr2R 11473861 intergenic not near genes chr2R_10_11470001 chr2R_11470001 RAL-900_95b 305 chr2R 11681518 11681561 chr2R 11684514 11684528 6 2980 4.0 5.0 4.5 1.1 3010 chr2R 11681518 intron Buffy + chr2R 11683023 intron Buffy + chr2R 11684528 intron,exon Buffy +,CG13196 - chr2R_6_11680001 chr2R_11680001 RAL-900_95b 306 chr2R 11863839 11863886 chr2R 11863946 11863993 5 106 1.5 1.0 1.2 2.3 154 chr2R 11863839 intergenic CG42531 + chr2R 11863916 intergenic CG42531 + chr2R 11863993 intergenic CG42531 + chr2R_5_11860001 chr2R_11860001 RAL-900_95b 307 chr2R 11945879 11945911 chr2R 11945970 11945991 4 91 2.0 4.0 3.0 1.0 112 chr2R 11945879 intron CG13188 + chr2R 11945935 intron CG13188 + chr2R 11945991 intron CG13188 + chr2R_4_11945001 chr2R_11945001 RAL-900_95b 308 chr2R 12185984 12186037 chr2R 12186097 12186130 20 95 5.5 4.5 5.0 3.3 146 chr2R 12185984 intron Cyp6g1 + chr2R 12186057 intron Cyp6g1 + chr2R 12186130 intron Cyp6g1 + chr2R_20_12185001 chr2R_12185001 RAL-900_95b 309 chr2R 12363386 12363416 chr2R 12363819 12363827 6 425 3.0 3.5 3.2 1.4 441 chr2R 12363386 intergenic CG30043 + chr2R 12363606 intergenic CG30043 + chr2R 12363827 intergenic not near genes chr2R_6_12360001 chr2R_12360001 RAL-900_95b 310 chr2R 12548549 12548554 chr2R 12548610 12548613 4 63 0.5 5.0 2.8 1.1 64 chr2R 12548549 intron fra + chr2R 12548581 intron fra + chr2R 12548613 intron fra + chr2R_4_12545001 chr2R_12545001 RAL-900_95b 311 chr2R 12565573 12565588 chr2R 12565945 12565954 5 369 2.0 3.0 2.5 1.4 381 chr2R 12565573 intergenic not near genes chr2R 12565764 intergenic Cyp301a1 + chr2R 12565954 intergenic Cyp301a1 + chr2R_5_12565001 chr2R_12565001 RAL-900_95b 312 chr2R 13043033 13043041 chr2R 13043132 13043140 4 99 6.0 2.0 4.0 0.8 107 chr2R 13043033 intergenic not near genes chr2R 13043086 intergenic not near genes chr2R 13043140 intergenic not near genes chr2R_4_13040001 chr2R_13040001 RAL-900_95b 313 chr2R 13061363 13061379 chr2R 13061429 13061445 4 68 1.0 0.5 0.8 2.2 82 chr2R 13061363 intron Drl-2 - chr2R 13061404 intron Drl-2 - chr2R 13061445 intron Drl-2 - chr2R_4_13060001 chr2R_13060001 RAL-900_95b 314 chr2R 13167411 13167436 chr2R 13167525 13167550 11 112 7.5 0.0 3.8 2.3 139 chr2R 13167411 intron GLaz - chr2R 13167480 intron GLaz - chr2R 13167550 intron GLaz - chr2R_11_13165001 chr2R_13165001 RAL-900_95b 315 chr2R 13276507 13276531 chr2R 13276642 13276666 4 132 7.0 5.0 6.0 0.6 159 chr2R 13276507 intron Dh31-R - chr2R 13276586 intron Dh31-R - chr2R 13276666 intron Dh31-R - chr2R_4_13275001 chr2R_13275001 RAL-900_95b 316 chr2R 13403909 13403931 chr2R 13404014 13404035 4 105 2.5 4.5 3.5 0.9 126 chr2R 13403909 intergenic not near genes chr2R 13403972 intergenic not near genes chr2R 13404035 intergenic not near genes chr2R_4_13400001 chr2R_13400001 RAL-900_95b 317 chr2R 13728119 13728156 chr2R 13735791 13735833 opus 5 7669 3.5 1.5 2.5 1.4 7714 chr2R 13728119 intron fas + chr2R 13731976 intron fas + chr2R 13735833 intron fas + chr2R_5_13730001 chr2R_13730001 RAL-900_95b 318 chr2R 13868883 13868926 chr2R 13868977 13869008 9 92 0.5 3.0 1.8 3.2 125 chr2R 13868883 intron shot - chr2R 13868946 intron shot - chr2R 13869008 intron shot - chr2R_9_13865001 chr2R_13865001 RAL-900_95b 319 chr2R 13905623 13905635 chr2R 13907588 13907596 Rt1a 5 1961 2.0 0.5 1.2 2.3 1973 chr2R 13905623 intron shot - chr2R 13906610 intron shot - chr2R 13907596 intron shot - chr2R_5_13905001 chr2R_13905001 RAL-900_95b 320 chr2R 14000215 14000264 chr2R 14000458 14000477 9 232 3.0 4.0 3.5 2.0 262 chr2R 14000215 intron mam + chr2R 14000346 intron mam + chr2R 14000477 intron mam + chr2R_9_14000001 chr2R_14000001 RAL-900_95b 321 chr2R 14310848 14310874 chr2R 14310920 14310928 9 74 1.0 2.5 1.8 3.2 80 chr2R 14310848 intron Shroom + chr2R 14310888 intron Shroom + chr2R 14310928 intron Shroom + chr2R_9_14310001 chr2R_14310001 RAL-900_95b 322 chr2R 14357537 14357570 chr2R 14357647 14357650 5 98 3.5 1.5 2.5 1.4 113 chr2R 14357537 intergenic CG8617 -,Arc1 - chr2R 14357594 intergenic CG8617 -,Arc1 - chr2R 14357650 intergenic Arc1 -,CG8617 - chr2R_5_14355001 chr2R_14355001 RAL-900_95b 323 chr2R 14400337 14400361 chr2R 14400455 14400478 7 115 6.0 4.0 5.0 1.2 141 chr2R 14400337 intergenic not near genes chr2R 14400408 intergenic not near genes chr2R 14400478 intergenic not near genes chr2R_7_14400001 chr2R_14400001 RAL-900_95b 324 chr2R 14497373 14497419 chr2R 14498556 14498605 1360 4 1174 0.0 2.5 1.2 1.8 1232 chr2R 14497373 3` UTR Cpsf160 - chr2R 14497989 intron Cpsf160 - chr2R 14498605 3` UTR Cpsf160 - chr2R_4_14495001 chr2R_14495001 RAL-900_95b 325 chr2R 14634279 14634312 chr2R 14634367 14634381 5 84 4.0 5.0 4.5 0.9 102 chr2R 14634279 intergenic not near genes chr2R 14634330 intergenic not near genes chr2R 14634381 intergenic not near genes chr2R_5_14630001 chr2R_14630001 RAL-900_95b 326 chr2R 14707123 14707152 chr2R 14707779 14707798 4 653 2.5 4.0 3.2 1.0 675 chr2R 14707123 intron mspo - chr2R 14707460 intron mspo - chr2R 14707798 intron mspo - chr2R_4_14705001 chr2R_14705001 RAL-900_95b 327 chr2R 14889195 14889223 chr2R 14897823 14897838 Max-element 6 8621 13.0 1.0 7.0 0.8 8643 chr2R 14889195 intergenic Cyp6a8 - chr2R 14893516 intergenic not near genes chr2R 14897838 intergenic not near genes chr2R_6_14890001 chr2R_14890001 RAL-900_95b 328 chr2R 14889226 14889242 chr2R 14897819 14897840 Max-element 5 8594 8.0 1.0 4.5 0.9 8614 chr2R 14889226 intergenic Cyp6a8 - chr2R 14893533 intergenic not near genes chr2R 14897840 intergenic not near genes chr2R_5_14890001 chr2R_14890001 RAL-900_95b 329 chr2R 14911710 14911726 chr2R 14911826 14911838 5 129 4.5 5.5 5.0 0.8 128 chr2R 14911710 intron CG10249 - chr2R 14911774 intron CG10249 - chr2R 14911838 intron CG10249 - chr2R_5_14910001 chr2R_14910001 RAL-900_95b 330 chr2R 14917870 14917882 chr2R 14917945 14917947 4 72 1.5 2.0 1.8 1.4 77 chr2R 14917870 intron CG10249 - chr2R 14917908 intron CG10249 - chr2R 14917947 intron CG10249 - chr2R_4_14915001 chr2R_14915001 RAL-900_95b 331 chr2R 14922126 14922173 chr2R 14922222 14922263 9 85 2.5 2.5 2.5 2.6 137 chr2R 14922126 intron CG10249 - chr2R 14922194 intron CG10249 - chr2R 14922263 intron CG10249 - chr2R_9_14920001 chr2R_14920001 RAL-900_95b 332 chr2R 15004739 15004756 chr2R 15005053 15005083 jockey 5 327 2.5 3.0 2.8 1.3 344 chr2R 15004739 intergenic not near genes chr2R 15004911 intergenic not near genes chr2R 15005083 intergenic not near genes chr2R_5_15000001 chr2R_15000001 RAL-900_95b 333 chr2R 15015457 15015481 chr2R 15022888 15022891 mdg1 5 7432 1.0 4.0 2.5 1.4 7434 chr2R 15015457 intron hbs + chr2R 15019174 intron hbs + chr2R 15022891 intron hbs + chr2R_5_15015001 chr2R_15015001 RAL-900_95b 334 chr2R 15033458 15033501 chr2R 15033555 15033557 4 72 3.5 3.0 3.2 1.0 99 chr2R 15033458 intron hbs + chr2R 15033508 intron hbs + chr2R 15033557 intron hbs + chr2R_4_15030001 chr2R_15030001 RAL-900_95b 335 chr2R 15084969 15084996 chr2R 15092037 15092065 297 5 7069 2.0 5.0 3.5 1.1 7096 chr2R 15084969 intergenic not near genes chr2R 15088517 intergenic not near genes chr2R 15092065 5` UTR CR44457 + chr2R_5_15085001 chr2R_15085001 RAL-900_95b 336 chr2R 15092394 15092417 chr2R 15092498 15092527 5 108 4.0 5.5 4.8 0.9 133 chr2R 15092394 5` UTR CR44457 + chr2R 15092460 intergenic CR44457 + chr2R 15092527 intergenic CR44457 + chr2R_5_15090001 chr2R_15090001 RAL-900_95b 337 chr2R 15092421 15092425 chr2R 15092496 15092496 4 85 3.5 5.0 4.2 0.8 75 chr2R 15092421 5` UTR CR44457 + chr2R 15092458 intergenic CR44457 + chr2R 15092496 intergenic CR44457 + chr2R_4_15090001 chr2R_15090001 RAL-900_95b 338 chr2R 15501952 15501990 chr2R 15502090 15502128 9 125 6.5 4.5 5.5 1.4 176 chr2R 15501952 exon Ir52b + chr2R 15502040 exon Ir52b + chr2R 15502128 exon Ir52b + chr2R_9_15500001 chr2R_15500001 RAL-900_95b 339 chr2R 16518024 16518069 chr2R 16518120 16518164 6 85 5.0 2.5 3.8 1.2 140 chr2R 16518024 intron Sema-2a + chr2R 16518094 intron Sema-2a + chr2R 16518164 intron Sema-2a + chr2R_6_16515001 chr2R_16515001 RAL-900_95b 340 chr2R 16571862 16571884 chr2R 16571977 16571994 4 109 6.0 4.5 5.2 0.6 132 chr2R 16571862 intergenic CG4927 + chr2R 16571928 intergenic CG4927 + chr2R 16571994 intergenic CG4927 + chr2R_4_16570001 chr2R_16570001 RAL-900_95b 341 chr2R 16571887 16571901 chr2R 16571966 16572016 5 99 5.5 4.0 4.8 0.9 129 chr2R 16571887 intergenic CG4927 + chr2R 16571952 intergenic CG4927 + chr2R 16572016 intergenic CG4927 + chr2R_5_16570001 chr2R_16570001 RAL-900_95b 342 chr2R 16713054 16713064 chr2R 16713122 16713123 4 74 0.0 1.5 0.8 2.2 69 chr2R 16713054 intron CG30463 - chr2R 16713088 intron CG30463 - chr2R 16713123 intron CG30463 - chr2R_4_16710001 chr2R_16710001 RAL-900_95b 343 chr2R 16808018 16808055 chr2R 16808134 16808134 4 96 3.5 3.0 3.2 1.0 116 chr2R 16808018 intergenic not near genes chr2R 16808076 intergenic not near genes chr2R 16808134 intergenic not near genes chr2R_4_16805001 chr2R_16805001 RAL-900_95b 344 chr2R 16981959 16982095 chr2R 16982072 16982193 5 100 0.0 0.0 0.0 5.0 234 chr2R 16981959 intron Cbp53E + chr2R 16982076 intron Cbp53E + chr2R 16982193 intron Cbp53E + chr2R_5_16980001 chr2R_16980001 RAL-900_95b 345 chr2R 16987029 16987072 chr2R 16987165 16987179 5 114 2.5 3.5 3.0 1.2 150 chr2R 16987029 intron Cbp53E + chr2R 16987104 intron Cbp53E + chr2R 16987179 intron Cbp53E + chr2R_5_16985001 chr2R_16985001 RAL-900_95b 346 chr2R 16993089 16993121 chr2R 16993172 16993185 5 73 2.0 1.5 1.8 1.8 96 chr2R 16993089 intron Cbp53E + chr2R 16993137 intron Cbp53E + chr2R 16993185 intron Cbp53E + chr2R_5_16990001 chr2R_16990001 RAL-900_95b 347 chr2R 17147229 17147271 chr2R 17152275 17152287 jockey 6 5029 1.0 2.5 1.8 2.1 5058 chr2R 17147229 intergenic not near genes chr2R 17149758 intergenic not near genes chr2R 17152287 intergenic not near genes chr2R_6_17145001 chr2R_17145001 RAL-900_95b 348 chr2R 17176370 17176389 chr2R 17182543 17182559 diver 8 6196 2.0 3.0 2.5 2.3 6189 chr2R 17176370 intergenic not near genes chr2R 17179464 intergenic not near genes chr2R 17182559 intergenic not near genes chr2R_8_17175001 chr2R_17175001 RAL-900_95b 349 chr2R 17381596 17381615 chr2R 17381672 17381683 5 84 2.0 1.0 1.5 2.0 87 chr2R 17381596 intergenic not near genes chr2R 17381640 intergenic not near genes chr2R 17381683 intergenic not near genes chr2R_5_17380001 chr2R_17380001 RAL-900_95b 350 chr2R 17459019 17459036 chr2R 17459090 17459121 6 91 4.5 3.5 4.0 1.2 102 chr2R 17459019 intron CG14478 + chr2R 17459070 intron CG14478 + chr2R 17459121 intron CG14478 + chr2R_6_17455001 chr2R_17455001 RAL-900_95b 351 chr2R 17459162 17459203 chr2R 17459415 17459418 8 239 4.0 3.5 3.8 1.7 256 chr2R 17459162 intron CG14478 + chr2R 17459290 intron CG14478 + chr2R 17459418 intron CG14478 + chr2R_8_17455001 chr2R_17455001 RAL-900_95b 352 chr2R 17703193 17703241 chr2R 17703293 17703295 5 85 3.0 7.0 5.0 0.8 102 chr2R 17703193 intron Uhg1 + chr2R 17703244 5` UTR Uhg1 + chr2R 17703295 5` UTR Uhg1 + chr2R_5_17700001 chr2R_17700001 RAL-900_95b 353 chr2R 17860159 17860201 chr2R 17860256 17860302 4 99 3.5 1.5 2.5 1.1 143 chr2R 17860159 3` UTR olf186-F + chr2R 17860230 3` UTR olf186-F + chr2R 17860302 3` UTR olf186-F + chr2R_4_17860001 chr2R_17860001 RAL-900_95b 354 chr2R 17860202 17860203 chr2R 17860254 17860305 4 76 3.0 1.5 2.2 1.2 103 chr2R 17860202 3` UTR olf186-F + chr2R 17860254 3` UTR olf186-F + chr2R 17860305 3` UTR olf186-F + chr2R_4_17860001 chr2R_17860001 RAL-900_95b 355 chr2R 18045208 18045222 chr2R 18045343 18045354 5 137 2.0 2.0 2.0 1.7 146 chr2R 18045208 intergenic CG5770 - chr2R 18045281 intergenic CG5770 - chr2R 18045354 intergenic CG5770 - chr2R_5_18045001 chr2R_18045001 RAL-900_95b 356 chr2R 18045683 18045692 chr2R 18046020 18046053 jockey 5 346 2.5 5.0 3.8 1.0 370 chr2R 18045683 intergenic not near genes chr2R 18045868 intergenic not near genes chr2R 18046053 intergenic CG5767 - chr2R_5_18045001 chr2R_18045001 RAL-900_95b 357 chr2R 18111707 18111709 chr2R 18115550 18115555 F-element 4 3856 8.0 1.5 4.8 0.7 3848 chr2R 18111707 intergenic not near genes chr2R 18113631 intergenic not near genes chr2R 18115555 intergenic not near genes chr2R_4_18110001 chr2R_18110001 RAL-900_95b 358 chr2R 18358367 18358412 chr2R 18372597 18372624 roo 7 14214 2.5 1.0 1.8 2.5 14257 chr2R 18358367 intergenic not near genes chr2R 18365496 intergenic not near genes chr2R 18372624 intergenic not near genes chr2R_7_18365001 chr2R_18365001 RAL-900_95b 359 chr2R 18405775 18405787 chr2R 18405831 18405887 5 85 1.5 0.0 0.8 2.8 112 chr2R 18405775 intergenic GstE6 +,GstE5 + chr2R 18405831 intergenic GstE6 +,GstE5 + chr2R 18405887 intergenic GstE6 + chr2R_5_18405001 chr2R_18405001 RAL-900_95b 360 chr2R 18510843 18510870 chr2R 18510986 18510986 6 136 3.5 0.5 2.0 2.0 143 chr2R 18510843 intergenic not near genes chr2R 18510914 intergenic not near genes chr2R 18510986 intergenic not near genes chr2R_6_18510001 chr2R_18510001 RAL-900_95b 361 chr2R 18745054 18745102 chr2R 18745179 18745192 5 114 0.0 1.5 0.8 2.8 138 chr2R 18745054 intron Hs3st-A + chr2R 18745123 intron Hs3st-A + chr2R 18745192 intron Hs3st-A + chr2R_5_18745001 chr2R_18745001 RAL-900_95b 362 chr2R 18926516 18926527 chr2R 18926594 18926634 5 101 2.0 1.0 1.5 2.0 118 chr2R 18926516 intron sano + chr2R 18926575 intron sano + chr2R 18926634 intron sano + chr2R_5_18925001 chr2R_18925001 RAL-900_95b 363 chr2R 18953155 18953192 chr2R 18953247 18953277 6 91 1.0 1.5 1.2 2.7 122 chr2R 18953155 intron sano + chr2R 18953216 intron sano + chr2R 18953277 intron sano + chr2R_6_18950001 chr2R_18950001 RAL-900_95b 364 chr2R 18964909 18964926 chr2R 18965005 18965022 4 96 3.0 4.0 3.5 0.9 113 chr2R 18964909 intergenic not near genes chr2R 18964966 intergenic not near genes chr2R 18965022 intergenic not near genes chr2R_4_18960001 chr2R_18960001 RAL-900_95b 365 chr2R 19026028 19026048 chr2R 19026188 19026208 6 158 5.5 0.0 2.8 1.6 180 chr2R 19026028 intron 5-HT1B - chr2R 19026118 intron 5-HT1B - chr2R 19026208 intron 5-HT1B - chr2R_6_19025001 chr2R_19025001 RAL-900_95b 366 chr2R 19040745 19040759 chr2R 19040810 19040819 6 74 1.5 3.5 2.5 1.7 74 chr2R 19040745 intergenic not near genes chr2R 19040782 intergenic not near genes chr2R 19040819 intergenic not near genes chr2R_6_19040001 chr2R_19040001 RAL-900_95b 367 chr2R 19067743 19067751 chr2R 19067804 19067814 4 79 1.5 1.5 1.5 1.6 71 chr2R 19067743 intron 5-HT1A + chr2R 19067778 intron 5-HT1A + chr2R 19067814 intron 5-HT1A + chr2R_4_19065001 chr2R_19065001 RAL-900_95b 368 chr2R 19165758 19165769 chr2R 19165832 19165835 4 89 3.0 3.0 3.0 1.0 77 chr2R 19165758 intron CG10737 + chr2R 19165796 intron CG10737 + chr2R 19165835 intron CG10737 + chr2R_4_19165001 chr2R_19165001 RAL-900_95b 369 chr2R 19352333 19352365 chr2R 19352432 19352444 5 95 1.5 2.5 2.0 1.7 111 chr2R 19352333 intron Rgk1 - chr2R 19352388 intron Rgk1 - chr2R 19352444 intron Rgk1 - chr2R_5_19350001 chr2R_19350001 RAL-900_95b 370 chr2R 19384875 19384911 chr2R 19384971 19385007 7 91 2.0 5.0 3.5 1.6 132 chr2R 19384875 exon CG10073 + chr2R 19384941 3` UTR CG10073 + chr2R 19385007 intergenic CG10073 + chr2R_7_19380001 chr2R_19380001 RAL-900_95b 371 chr2R 19536449 19536496 chr2R 19536551 19536598 11 94 3.0 3.5 3.2 2.6 149 chr2R 19536449 intron sm - chr2R 19536524 intron sm - chr2R 19536598 intron sm - chr2R_11_19535001 chr2R_19535001 RAL-900_95b 372 chr2R 19776606 19776622 chr2R 19779924 19779925 jockey 4 3323 2.0 8.0 5.0 0.7 3319 chr2R 19776606 intergenic not near genes chr2R 19778266 intergenic not near genes chr2R 19779925 intergenic not near genes chr2R_4_19775001 chr2R_19775001 RAL-900_95b 373 chr2R 19837693 19837747 chr2R 19837812 19837815 7 97 1.0 1.0 1.0 3.5 122 chr2R 19837693 intergenic not near genes chr2R 19837754 intergenic not near genes chr2R 19837815 intergenic not near genes chr2R_7_19835001 chr2R_19835001 RAL-900_95b 374 chr2R 20006395 20006415 chr2R 20006502 20006522 6 107 2.0 2.5 2.2 1.9 127 chr2R 20006395 intergenic not near genes chr2R 20006458 intergenic not near genes chr2R 20006522 intergenic not near genes chr2R_6_20005001 chr2R_20005001 RAL-900_95b 375 chr2R 20069217 20069243 chr2R 20071876 20071903 opus 4 2660 0.5 1.0 0.8 2.2 2686 chr2R 20069217 intergenic not near genes chr2R 20070560 intergenic not near genes chr2R 20071903 intergenic not near genes chr2R_4_20070001 chr2R_20070001 RAL-900_95b 376 chr2R 20383192 20383234 chr2R 20383294 20383296 5 81 3.0 1.5 2.2 1.6 104 chr2R 20383192 intergenic not near genes chr2R 20383244 intergenic not near genes chr2R 20383296 intergenic not near genes chr2R_5_20380001 chr2R_20380001 RAL-900_95b 377 chr2R 20395159 20395183 chr2R 20395257 20395270 4 95 6.0 3.0 4.5 0.7 111 chr2R 20395159 intergenic not near genes chr2R 20395214 intergenic not near genes chr2R 20395270 intergenic not near genes chr2R_4_20395001 chr2R_20395001 RAL-900_95b 378 chr2R 20581772 20581827 chr2R 20581879 20581894 4 78 3.5 0.5 2.0 1.3 122 chr2R 20581772 intron qsm - chr2R 20581833 intron qsm - chr2R 20581894 intron qsm - chr2R_4_20580001 chr2R_20580001 RAL-900_95b 379 chr2R 20604186 20604209 chr2R 20604275 20604282 4 82 2.5 1.5 2.0 1.3 96 chr2R 20604186 intron bl + chr2R 20604234 intron bl + chr2R 20604282 intron bl + chr2R_4_20600001 chr2R_20600001 RAL-900_95b 380 chr2R 20678701 20678756 chr2R 20679040 20679060 4 316 1.0 1.5 1.2 1.8 359 chr2R 20678701 intergenic not near genes chr2R 20678880 intergenic not near genes chr2R 20679060 intergenic not near genes chr2R_4_20675001 chr2R_20675001 RAL-900_95b 381 chr2R 20702650 20702701 chr2R 20702746 20702757 6 77 4.0 5.0 4.5 1.1 107 chr2R 20702650 intron dpr + chr2R 20702704 intron dpr + chr2R 20702757 intron dpr + chr2R_6_20700001 chr2R_20700001 RAL-900_95b 382 chr2R 21103522 21103536 chr2R 21103622 21103636 4 100 4.5 2.0 3.2 1.0 114 chr2R 21103522 intron ktub + chr2R 21103579 intron ktub + chr2R 21103636 intron ktub + chr2R_4_21100001 chr2R_21100001 RAL-900_95b 383 chr2R 21232626 21232680 chr2R 21232816 21232871 4 184 1.5 0.0 0.8 2.2 245 chr2R 21232626 intron ASPP - chr2R 21232748 intron ASPP - chr2R 21232871 intron ASPP - chr2R_4_21230001 chr2R_21230001 RAL-900_95b 384 chr2R 21370508 21370536 chr2R 21370623 21370640 6 114 0.5 4.0 2.2 1.9 132 chr2R 21370508 intron cv-2 - chr2R 21370574 intron cv-2 - chr2R 21370640 intron cv-2 - chr2R_6_21370001 chr2R_21370001 RAL-900_95b 385 chr2R 21481216 21481243 chr2R 21481367 21481392 4 160 4.0 3.0 3.5 0.9 176 chr2R 21481216 intergenic Sdc - chr2R 21481304 intergenic Sdc - chr2R 21481392 intergenic Sdc - chr2R_4_21480001 chr2R_21480001 RAL-900_95b 386 chr2R 21660872 21660908 chr2R 21660970 21660986 8 97 2.5 2.0 2.2 2.5 114 chr2R 21660872 intergenic pirk - chr2R 21660929 intergenic pirk - chr2R 21660986 3` UTR pirk - chr2R_8_21660001 chr2R_21660001 RAL-900_95b 387 chr2R 21753076 21753102 chr2R 21753580 21753586 roo 4 500 6.0 2.0 4.0 0.8 510 chr2R 21753076 intergenic not near genes chr2R 21753331 intergenic not near genes chr2R 21753586 intergenic not near genes chr2R_4_21750001 chr2R_21750001 RAL-900_95b 388 chr2R 21809532 21809557 chr2R 21817762 21817782 roo 10 8230 6.5 1.0 3.8 2.1 8250 chr2R 21809532 intergenic not near genes chr2R 21813657 intergenic not near genes chr2R 21817782 intergenic not near genes chr2R_10_21810001 chr2R_21810001 RAL-900_95b 389 chr2R 21906277 21906284 chr2R 21906372 21906405 4 113 0.5 1.0 0.8 2.2 128 chr2R 21906277 intron Fili + chr2R 21906341 intron Fili + chr2R 21906405 intron Fili + chr2R_4_21905001 chr2R_21905001 RAL-900_95b 390 chr2R 22012975 22013002 chr2R 22013090 22013117 6 110 4.0 5.5 4.8 1.0 142 chr2R 22012975 intron CG34370 - chr2R 22013046 intron CG34370 - chr2R 22013117 intron CG34370 - chr2R_6_22010001 chr2R_22010001 RAL-900_95b 391 chr2R 22072685 22072716 chr2R 22072768 22072782 8 81 6.5 1.5 4.0 1.6 97 chr2R 22072685 intron CG11474 - chr2R 22072734 intron CG11474 - chr2R 22072782 intron CG11474 - chr2R_8_22070001 chr2R_22070001 RAL-900_95b 392 chr2R 22099856 22099876 chr2R 22099957 22099977 6 101 2.5 6.0 4.2 1.2 121 chr2R 22099856 intergenic CG11073 - chr2R 22099916 intergenic CG11073 - chr2R 22099977 intergenic CG11073 - chr2R_6_22095001 chr2R_22095001 RAL-900_95b 393 chr2R 22132279 22132296 chr2R 22132379 22132391 4 98 3.0 7.0 5.0 0.7 112 chr2R 22132279 intergenic not near genes chr2R 22132335 intergenic not near genes chr2R 22132391 intergenic not near genes chr2R_4_22130001 chr2R_22130001 RAL-900_95b 394 chr2R 22185697 22185707 chr2R 22185778 22185788 4 81 1.0 0.5 0.8 2.2 91 chr2R 22185697 3` UTR MED16 + chr2R 22185742 3` UTR MED16 + chr2R 22185788 3` UTR MED16 + chr2R_4_22185001 chr2R_22185001 RAL-900_95b 395 chr2R 22545601 22545638 chr2R 22545700 22545737 8 98 8.0 6.0 7.0 1.0 136 chr2R 22545601 intron px - chr2R 22545669 intron px - chr2R 22545737 intron px - chr2R_8_22545001 chr2R_22545001 RAL-900_95b 396 chr2R 22958378 22958387 chr2R 22958490 22958506 4 130 3.0 0.0 1.5 1.6 128 chr2R 22958378 intergenic not near genes chr2R 22958442 intergenic not near genes chr2R 22958506 intergenic not near genes chr2R_4_22955001 chr2R_22955001 RAL-900_95b 397 chr2R 22991610 22991655 chr2R 22991722 22991737 6 97 2.5 0.5 1.5 2.4 127 chr2R 22991610 intron twi + chr2R 22991674 intron twi + chr2R 22991737 intron twi + chr2R_6_22990001 chr2R_22990001 RAL-900_95b 398 chr2R 23115505 23115524 chr2R 23116039 23116058 7 533 3.0 6.0 4.5 1.3 553 chr2R 23115505 intergenic not near genes chr2R 23115782 intergenic not near genes chr2R 23116058 intergenic not near genes chr2R_7_23115001 chr2R_23115001 RAL-900_95b 399 chr2R 23122891 23122924 chr2R 23122991 23123024 7 96 4.0 3.5 3.8 1.5 133 chr2R 23122891 intergenic not near genes chr2R 23122958 intergenic not near genes chr2R 23123024 intergenic not near genes chr2R_7_23120001 chr2R_23120001 RAL-900_95b 400 chr2R 23122928 23122937 chr2R 23122987 23123032 4 80 2.5 2.5 2.5 1.1 104 chr2R 23122928 intergenic not near genes chr2R 23122980 intergenic not near genes chr2R 23123032 intergenic not near genes chr2R_4_23120001 chr2R_23120001 RAL-900_95b 401 chr2R 23155732 23155864 chr2R 23155803 23155959 7 87 5.0 2.5 3.8 1.5 227 chr2R 23155732 intron CG9899 + chr2R 23155846 intron CG9899 + chr2R 23155959 intron CG9899 + chr2R_7_23155001 chr2R_23155001 RAL-900_95b 402 chr2R 23351925 23351951 chr2R 23352014 23352057 4 88 0.0 1.0 0.5 2.7 132 chr2R 23351925 exon CG34210 + chr2R 23351991 3` UTR CG34210 + chr2R 23352057 3` UTR CG34210 + chr2R_4_23350001 chr2R_23350001 RAL-900_95b 403 chr2R 23410089 23410126 chr2R 23410584 23410606 5 479 1.0 2.5 1.8 1.8 517 chr2R 23410089 intergenic not near genes chr2R 23410348 intergenic not near genes chr2R 23410606 intergenic not near genes chr2R_5_23410001 chr2R_23410001 RAL-900_95b 404 chr2R 23423744 23423765 chr2R 23423897 23423908 6 153 2.5 1.5 2.0 2.0 164 chr2R 23423744 intron CG9815 - chr2R 23423826 intron CG9815 - chr2R 23423908 intron CG9815 - chr2R_6_23420001 chr2R_23420001 RAL-900_95b 405 chr2R 23607059 23607181 chr2R 23607120 23607278 4 86 9.5 5.0 7.2 0.5 219 chr2R 23607059 intron CG17664 - chr2R 23607168 intron CG17664 - chr2R 23607278 intron CG17664 - chr2R_4_23605001 chr2R_23605001 RAL-900_95b 406 chr2R 23719811 23719825 chr2R 23719888 23719905 4 84 0.5 1.0 0.8 2.2 94 chr2R 23719811 intron,exon Sesn +,CG18128 - chr2R 23719858 intron,5` UTR Sesn +,CG18128 - chr2R 23719905 intron,5` UTR Sesn +,CG18128 - chr2R_4_23715001 chr2R_23715001 RAL-900_95b 407 chr2R 23819902 23819946 chr2R 23820006 23820035 5 91 3.0 1.0 2.0 1.7 133 chr2R 23819902 intergenic CG5549 + chr2R 23819968 intergenic CG5549 + chr2R 23820035 intergenic CG5549 + chr2R_5_23815001 chr2R_23815001 RAL-900_95b 408 chr2R 24031366 24031404 chr2R 24031470 24031492 6 95 4.5 5.0 4.8 1.0 126 chr2R 24031366 5` UTR CG30172 - chr2R 24031429 intergenic CG30172 -,Chi - chr2R 24031492 intergenic Chi -,CG30172 - chr2R_6_24030001 chr2R_24030001 RAL-900_95b 409 chr2R 24031407 24031411 chr2R 24031465 24031508 4 70 4.5 4.0 4.2 0.8 101 chr2R 24031407 5` UTR CG30172 - chr2R 24031458 intergenic CG30172 -,Chi - chr2R 24031508 intergenic Chi -,CG30172 - chr2R_4_24030001 chr2R_24030001 RAL-900_95b 410 chr2R 24077954 24077956 chr2R 24078004 24078032 5 65 0.5 4.5 2.5 1.4 78 chr2R 24077954 3` UTR Mlp60A + chr2R 24077993 3` UTR Mlp60A + chr2R 24078032 3` UTR Mlp60A + chr2R_5_24075001 chr2R_24075001 RAL-900_95b 411 chr2R 24087204 24087216 chr2R 24087321 24087339 4 131 3.0 6.5 4.8 0.7 135 chr2R 24087204 intron snama + chr2R 24087272 intron snama + chr2R 24087339 intron snama + chr2R_4_24085001 chr2R_24085001 RAL-900_95b 412 chr2R 24177216 24177260 chr2R 24184721 24184765 412 8 7498 4.5 5.5 5.0 1.3 7549 chr2R 24177216 3` UTR Nop60B + chr2R 24180990 intron Nop60B + chr2R 24184765 3` UTR Nop60B + chr2R_8_24180001 chr2R_24180001 RAL-900_95b 413 chr2R 24542606 24542626 chr2R 24542691 24542701 4 81 2.5 1.5 2.0 1.3 95 chr2R 24542606 intron,intron CG4622 -,ITP + chr2R 24542654 intron,intron CG4622 -,ITP + chr2R 24542701 intron,intron CG4622 -,ITP + chr2R_4_24540001 chr2R_24540001 RAL-900_95b 414 chr2R 24884030 24884078 chr2R 24884132 24884179 9 89 5.0 2.5 3.8 1.9 149 chr2R 24884030 intron NKAIN + chr2R 24884104 intron NKAIN + chr2R 24884179 intron NKAIN + chr2R_9_24880001 chr2R_24880001 RAL-900_95b 415 chr2R 25022641 25022673 chr2R 25022723 25022737 6 82 1.5 2.5 2.0 2.0 96 chr2R 25022641 intron uzip + chr2R 25022689 intron uzip + chr2R 25022737 intron uzip + chr2R_6_25020001 chr2R_25020001 RAL-900_95b 416 chr2R 25131005 25131043 chr2R 25131102 25131122 4 92 0.5 3.5 2.0 1.3 117 chr2R 25131005 intron lov - chr2R 25131064 intron lov - chr2R 25131122 intron lov - chr2R_4_25130001 chr2R_25130001 RAL-900_95b 417 chr2R 25141648 25141683 chr2R 25159346 25159357 roo 8 17691 4.0 4.0 4.0 1.6 17709 chr2R 25141648 intergenic not near genes chr2R 25150502 intergenic not near genes chr2R 25159357 intergenic not near genes chr2R_8_25150001 chr2R_25150001 RAL-900_95b 418 chr3L 86443 86487 chr3L 86542 86575 5 91 1.5 2.0 1.8 1.8 132 chr3L 86443 intergenic not near genes chr3L 86509 intergenic not near genes chr3L 86575 intergenic not near genes chr3L_5_85001 chr3L_85001 RAL-900_95b 419 chr3L 105737 105772 chr3L 105852 105856 4 107 5.5 6.5 6.0 0.6 119 chr3L 105737 intergenic not near genes chr3L 105796 intergenic not near genes chr3L 105856 intergenic not near genes chr3L_4_105001 chr3L_105001 RAL-900_95b 420 chr3L 110191 110197 chr3L 119378 119384 roo 4 9187 10.5 3.5 7.0 0.5 9193 chr3L 110191 intergenic not near genes chr3L 114788 intergenic not near genes chr3L 119384 intergenic not near genes chr3L_4_110001 chr3L_110001 RAL-900_95b 421 chr3L 110225 110238 chr3L 119377 119405 roo 4 9164 4.0 3.5 3.8 0.8 9180 chr3L 110225 intergenic not near genes chr3L 114815 intergenic not near genes chr3L 119405 intergenic not near genes chr3L_4_110001 chr3L_110001 RAL-900_95b 422 chr3L 416143 416164 chr3L 416221 416266 8 86 1.5 3.0 2.2 2.5 123 chr3L 416143 intergenic not near genes chr3L 416204 intergenic not near genes chr3L 416266 intergenic not near genes chr3L_8_415001 chr3L_415001 RAL-900_95b 423 chr3L 563950 563998 chr3L 564149 564180 7 182 0.5 5.5 3.0 1.8 230 chr3L 563950 intron hipk + chr3L 564065 intron hipk + chr3L 564180 intron hipk + chr3L_7_560001 chr3L_560001 RAL-900_95b 424 chr3L 606903 606915 chr3L 606971 607014 4 83 3.5 0.0 1.8 1.4 111 chr3L 606903 intergenic Reg-2 - chr3L 606958 intergenic Reg-2 - chr3L 607014 intergenic Reg-2 - chr3L_4_605001 chr3L_605001 RAL-900_95b 425 chr3L 789912 789922 chr3L 790410 790420 roo 4 496 3.5 1.0 2.2 1.2 508 chr3L 789912 intergenic not near genes chr3L 790166 intergenic not near genes chr3L 790420 intergenic not near genes chr3L_4_790001 chr3L_790001 RAL-900_95b 426 chr3L 925185 925205 chr3L 932601 932616 mdg1 4 7418 2.5 1.5 2.0 1.3 7431 chr3L 925185 intron Glut1 + chr3L 928900 intron Glut1 + chr3L 932616 intron Glut1 + chr3L_4_925001 chr3L_925001 RAL-900_95b 427 chr3L 939797 939803 chr3L 940890 940924 jockey 4 1104 2.5 3.5 3.0 1.0 1127 chr3L 939797 intron Glut1 + chr3L 940360 intron Glut1 + chr3L 940924 intron Glut1 + chr3L_4_940001 chr3L_940001 RAL-900_95b 428 chr3L 947741 947748 chr3L 947809 947847 4 75 2.0 3.0 2.5 1.1 106 chr3L 947741 intron Glut1 + chr3L 947794 intron Glut1 + chr3L 947847 intron Glut1 + chr3L_4_945001 chr3L_945001 RAL-900_95b 429 chr3L 958321 958338 chr3L 958405 958407 4 85 2.0 4.5 3.2 1.0 86 chr3L 958321 intron Glut1 + chr3L 958364 intron Glut1 + chr3L 958407 intron Glut1 + chr3L_4_955001 chr3L_955001 RAL-900_95b 430 chr3L 1021615 1021625 chr3L 1021669 1021711 9 72 1.5 1.0 1.2 4.1 96 chr3L 1021615 intron trio - chr3L 1021663 intron trio - chr3L 1021711 intron trio - chr3L_9_1020001 chr3L_1020001 RAL-900_95b 431 chr3L 1154118 1154146 chr3L 1163286 1163314 roo 5 9164 3.0 1.5 2.2 1.6 9196 chr3L 1154118 intron bab2 - chr3L 1158716 intron bab2 - chr3L 1163314 intron bab2 - chr3L_5_1155001 chr3L_1155001 RAL-900_95b 432 chr3L 1364051 1364065 chr3L 1364121 1364141 4 72 0.0 3.0 1.5 1.6 90 chr3L 1364051 intron Ptp61F - chr3L 1364096 intron Ptp61F - chr3L 1364141 intron Ptp61F - chr3L_4_1360001 chr3L_1360001 RAL-900_95b 433 chr3L 1506002 1506033 chr3L 1513599 1513609 17.6 7 7597 4.5 2.5 3.5 1.6 7607 chr3L 1506002 intron,intron Psa +,cue - chr3L 1509806 intron,intron Psa +,cue - chr3L 1513609 intron,intron Psa +,cue - chr3L_7_1505001 chr3L_1505001 RAL-900_95b 434 chr3L 1585918 1585937 chr3L 1586019 1586038 4 101 3.0 3.0 3.0 1.0 120 chr3L 1585918 intron CG13917 + chr3L 1585978 intron CG13917 + chr3L 1586038 intron CG13917 + chr3L_4_1585001 chr3L_1585001 RAL-900_95b 435 chr3L 1817547 1817596 chr3L 1817652 1817659 5 88 5.5 3.5 4.5 0.9 112 chr3L 1817547 intron GV1 + chr3L 1817603 intron GV1 + chr3L 1817659 intron GV1 + chr3L_5_1815001 chr3L_1815001 RAL-900_95b 436 chr3L 2108243 2108281 chr3L 2113460 2113480 copia 6 5214 0.0 3.5 1.8 2.1 5237 chr3L 2108243 intron sls - chr3L 2110862 intron sls - chr3L 2113480 intron sls - chr3L_6_2110001 chr3L_2110001 RAL-900_95b 437 chr3L 2139189 2139228 chr3L 2139290 2139304 5 90 3.5 1.0 2.2 1.6 115 chr3L 2139189 intron zormin - chr3L 2139246 intron zormin - chr3L 2139304 intron zormin - chr3L_5_2135001 chr3L_2135001 RAL-900_95b 438 chr3L 2321166 2321193 chr3L 2321247 2321260 4 74 2.5 1.0 1.8 1.4 94 chr3L 2321166 intergenic not near genes chr3L 2321213 intergenic not near genes chr3L 2321260 intergenic not near genes chr3L_4_2320001 chr3L_2320001 RAL-900_95b 439 chr3L 2908134 2908182 chr3L 2908255 2908288 8 115 3.0 5.0 4.0 1.6 154 chr3L 2908134 intron Shab + chr3L 2908211 intron Shab + chr3L 2908288 intron Shab + chr3L_8_2905001 chr3L_2905001 RAL-900_95b 440 chr3L 2911801 2911807 chr3L 2911868 2911887 4 81 1.5 0.5 1.0 2.0 86 chr3L 2911801 intron Shab + chr3L 2911844 intron Shab + chr3L 2911887 intron Shab + chr3L_4_2910001 chr3L_2910001 RAL-900_95b 441 chr3L 2927854 2927869 chr3L 2936116 2936153 Tirant 4 8274 2.5 3.0 2.8 1.1 8299 chr3L 2927854 intron Shab + chr3L 2932004 intron Shab + chr3L 2936153 intron Shab + chr3L_4_2930001 chr3L_2930001 RAL-900_95b 442 chr3L 3138969 3139010 chr3L 3139073 3139119 7 99 1.5 2.0 1.8 2.5 150 chr3L 3138969 intron CG11537 - chr3L 3139044 intron CG11537 - chr3L 3139119 intron CG11537 - chr3L_7_3135001 chr3L_3135001 RAL-900_95b 443 chr3L 3259622 3259832 chr3L 3259714 3259916 5 102 0.5 4.5 2.5 1.4 294 chr3L 3259622 intron ckd + chr3L 3259769 intron ckd + chr3L 3259916 intron ckd + chr3L_5_3255001 chr3L_3255001 RAL-900_95b 444 chr3L 3314133 3314171 chr3L 3314270 3314290 11 127 7.5 6.0 6.8 1.4 157 chr3L 3314133 intergenic ZnT63C +,Drsl2 + chr3L 3314212 intergenic Drsl2 +,ZnT63C + chr3L 3314290 intergenic Drsl2 +,ZnT63C + chr3L_11_3310001 chr3L_3310001 RAL-900_95b 445 chr3L 3470137 3470189 chr3L 3470233 3470245 9 87 0.5 2.0 1.2 4.1 108 chr3L 3470137 intron CG14971 - chr3L 3470191 intron CG14971 - chr3L 3470245 intron CG14971 - chr3L_9_3470001 chr3L_3470001 RAL-900_95b 446 chr3L 3483556 3483567 chr3L 3483750 3483759 5 200 2.0 5.0 3.5 1.1 203 chr3L 3483556 intron CG42324 + chr3L 3483658 intron CG42324 + chr3L 3483759 intron CG42324 + chr3L_5_3480001 chr3L_3480001 RAL-900_95b 447 chr3L 3484310 3484317 chr3L 3484392 3484397 5 95 5.0 6.0 5.5 0.8 87 chr3L 3484310 intron,exon CG42324 +,CG43074 - chr3L 3484354 intron,exon CG42324 +,CG43074 - chr3L 3484397 intron,intron CG42324 +,CG43074 - chr3L_5_3480001 chr3L_3480001 RAL-900_95b 448 chr3L 3566379 3566430 chr3L 3566477 3566508 15 95 0.5 3.5 2.0 5.0 129 chr3L 3566379 intron Eip63E + chr3L 3566444 intron Eip63E + chr3L 3566508 intron Eip63E + chr3L_15_3565001 chr3L_3565001 RAL-900_95b 449 chr3L 3627221 3627261 chr3L 3627346 3627386 6 123 0.0 2.5 1.2 2.7 165 chr3L 3627221 intron dar1 + chr3L 3627304 intron dar1 + chr3L 3627386 intron dar1 + chr3L_6_3625001 chr3L_3625001 RAL-900_95b 450 chr3L 3670549 3670590 chr3L 3670657 3670666 10 99 4.5 1.0 2.8 2.6 117 chr3L 3670549 intergenic not near genes chr3L 3670608 intergenic not near genes chr3L 3670666 intergenic not near genes chr3L_10_3670001 chr3L_3670001 RAL-900_95b 451 chr3L 3815031 3815081 chr3L 3815132 3815146 8 88 4.5 1.5 3.0 2.0 115 chr3L 3815031 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815088 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815146 intron,intron Scsalpha +,CR43932 - chr3L_8_3815001 chr3L_3815001 RAL-900_95b 452 chr3L 3833729 3833770 chr3L 3833990 3834031 pogo 4 255 2.0 0.0 1.0 2.0 302 chr3L 3833729 intron enc + chr3L 3833880 intron enc + chr3L 3834031 intron enc + chr3L_4_3830001 chr3L_3830001 RAL-900_95b 453 chr3L 3864838 3864852 chr3L 3864941 3864954 5 103 0.0 2.0 1.0 2.5 116 chr3L 3864838 intergenic CR45379 - chr3L 3864896 intergenic CR45379 - chr3L 3864954 intergenic not near genes chr3L_5_3860001 chr3L_3860001 RAL-900_95b 454 chr3L 3925988 3926043 chr3L 3926099 3926102 5 91 4.0 0.0 2.0 1.7 114 chr3L 3925988 intron Eip63F-1 - chr3L 3926045 intron Eip63F-1 - chr3L 3926102 intron Eip63F-1 - chr3L_5_3925001 chr3L_3925001 RAL-900_95b 455 chr3L 4146801 4146831 chr3L 4146903 4146933 4 101 1.0 5.0 3.0 1.0 132 chr3L 4146801 intergenic not near genes chr3L 4146867 intergenic not near genes chr3L 4146933 intergenic not near genes chr3L_4_4145001 chr3L_4145001 RAL-900_95b 456 chr3L 4328750 4328755 chr3L 4336241 4336241 412 4 7496 0.5 4.0 2.2 1.2 7491 chr3L 4328750 intron Cip4 - chr3L 4332496 intron Cip4 - chr3L 4336241 intron Cip4 - chr3L_4_4330001 chr3L_4330001 RAL-900_95b 457 chr3L 4328757 4328765 chr3L 4336240 4336268 412 4 7496 0.5 4.0 2.2 1.2 7511 chr3L 4328757 intron Cip4 - chr3L 4332512 intron Cip4 - chr3L 4336268 exon Cip4 - chr3L_4_4330001 chr3L_4330001 RAL-900_95b 458 chr3L 4341331 4341335 chr3L 21448026 21448026 8 17106693 11.5 12.0 11.8 0.6 17106695 chr3L 4341331 intron Cip4 - chr3L 12894678 3` UTR CG14118 + chr3L 21448026 3` UTR Syx7 + chr3L_8_12890001 chr3L_12890001 RAL-900_95b 459 chr3L 4837901 4837923 chr3L 4837965 4837981 9 83 1.5 2.5 2.0 3.0 80 chr3L 4837901 3` UTR CG13707 - chr3L 4837941 3` UTR CG13707 - chr3L 4837981 3` UTR CG13707 - chr3L_9_4835001 chr3L_4835001 RAL-900_95b 460 chr3L 5034161 5034189 chr3L 5043323 5043361 roo 5 9161 3.0 3.0 3.0 1.2 9200 chr3L 5034161 intron Con - chr3L 5038761 intron Con - chr3L 5043361 intron Con - chr3L_5_5035001 chr3L_5035001 RAL-900_95b 461 chr3L 5045447 5045489 chr3L 5050238 5050252 Doc 6 4775 3.5 4.0 3.8 1.2 4805 chr3L 5045447 intron Con - chr3L 5047850 intron Con - chr3L 5050252 intron Con - chr3L_6_5045001 chr3L_5045001 RAL-900_95b 462 chr3L 5066283 5066325 chr3L 5066402 5066408 6 106 2.0 2.0 2.0 2.0 125 chr3L 5066283 intron Con - chr3L 5066346 intron Con - chr3L 5066408 intron Con - chr3L_6_5065001 chr3L_5065001 RAL-900_95b 463 chr3L 5104470 5104503 chr3L 5124624 5124657 4 20154 5.5 6.0 5.8 0.6 20187 chr3L 5104470 intergenic not near genes chr3L 5114564 intergenic not near genes chr3L 5124657 intergenic not near genes chr3L_4_5110001 chr3L_5110001 RAL-900_95b 464 chr3L 5164620 5164661 chr3L 5164713 5164717 5 84 5.5 5.0 5.2 0.8 97 chr3L 5164620 intron shep - chr3L 5164668 intron shep - chr3L 5164717 intron shep - chr3L_5_5160001 chr3L_5160001 RAL-900_95b 465 chr3L 5188904 5188931 chr3L 5188993 5189032 5 93 3.5 5.0 4.2 1.0 128 chr3L 5188904 intron shep - chr3L 5188968 intron shep - chr3L 5189032 intron shep - chr3L_5_5185001 chr3L_5185001 RAL-900_95b 466 chr3L 5299160 5299182 chr3L 5306590 5306638 Quasimodo 5 7441 5.0 4.0 4.5 0.9 7478 chr3L 5299160 intergenic not near genes chr3L 5302899 intergenic not near genes chr3L 5306638 intergenic not near genes chr3L_5_5300001 chr3L_5300001 RAL-900_95b 467 chr3L 5485038 5485075 chr3L 5485131 5485140 5 89 2.5 4.0 3.2 1.2 102 chr3L 5485038 intergenic not near genes chr3L 5485089 intergenic not near genes chr3L 5485140 intergenic not near genes chr3L_5_5485001 chr3L_5485001 RAL-900_95b 468 chr3L 5537743 5537749 chr3L 5538064 5538111 jockey 4 342 2.0 4.0 3.0 1.0 368 chr3L 5537743 intergenic not near genes chr3L 5537927 intergenic CG10625 - chr3L 5538111 intergenic CG10625 - chr3L_4_5535001 chr3L_5535001 RAL-900_95b 469 chr3L 5910012 5910042 chr3L 5910273 5910298 pogo 4 260 5.5 5.0 5.2 0.6 286 chr3L 5910012 intron CG13288 + chr3L 5910155 intron CG13288 + chr3L 5910298 intron CG13288 + chr3L_4_5910001 chr3L_5910001 RAL-900_95b 470 chr3L 6040383 6040391 chr3L 6042724 6042733 Doc 6 2355 3.0 4.0 3.5 1.3 2350 chr3L 6040383 intergenic Jon65Aiv + chr3L 6041558 intergenic not near genes chr3L 6042733 intergenic not near genes chr3L_6_6040001 chr3L_6040001 RAL-900_95b 471 chr3L 6064994 6065041 chr3L 6065091 6065108 7 81 5.5 2.0 3.8 1.5 114 chr3L 6064994 intergenic not near genes chr3L 6065051 intergenic not near genes chr3L 6065108 intergenic not near genes chr3L_7_6065001 chr3L_6065001 RAL-900_95b 472 chr3L 6116700 6116727 chr3L 6116779 6116789 5 83 1.0 1.0 1.0 2.5 89 chr3L 6116700 intron Ets65A + chr3L 6116744 intron Ets65A + chr3L 6116789 intron Ets65A + chr3L_5_6115001 chr3L_6115001 RAL-900_95b 473 chr3L 6119142 6119155 chr3L 6119239 6119252 4 97 0.5 0.0 0.2 3.3 110 chr3L 6119142 exon Ets65A + chr3L 6119197 intron Ets65A + chr3L 6119252 intron Ets65A + chr3L_4_6115001 chr3L_6115001 RAL-900_95b 474 chr3L 6159872 6159883 chr3L 6159968 6159993 5 103 2.5 7.5 5.0 0.8 121 chr3L 6159872 intergenic not near genes chr3L 6159932 intergenic not near genes chr3L 6159993 intergenic not near genes chr3L_5_6155001 chr3L_6155001 RAL-900_95b 475 chr3L 6159888 6159893 chr3L 6159958 6159973 4 92 2.0 4.0 3.0 1.0 85 chr3L 6159888 intergenic not near genes chr3L 6159930 intergenic not near genes chr3L 6159973 intergenic not near genes chr3L_4_6155001 chr3L_6155001 RAL-900_95b 476 chr3L 6405666 6405687 chr3L 6432120 6432159 roo 8 26469 2.5 3.5 3.0 2.0 26493 chr3L 6405666 intron CG42747 + chr3L 6418912 intron CG42747 + chr3L 6432159 intron CG42747 + chr3L_8_6415001 chr3L_6415001 RAL-900_95b 477 chr3L 6781139 6781148 chr3L 6783136 6783181 Doc 4 2024 4.5 4.5 4.5 0.7 2042 chr3L 6781139 intergenic not near genes chr3L 6782160 intergenic not near genes chr3L 6783181 intergenic not near genes chr3L_4_6780001 chr3L_6780001 RAL-900_95b 478 chr3L 6887501 6887526 chr3L 6895008 6895038 roo 5 7511 8.5 4.0 6.2 0.7 7537 chr3L 6887501 intergenic not near genes chr3L 6891270 intergenic not near genes chr3L 6895038 intergenic not near genes chr3L_5_6890001 chr3L_6890001 RAL-900_95b 479 chr3L 6994891 6994909 chr3L 6995502 6995540 BS 4 626 0.5 2.0 1.2 1.8 649 chr3L 6994891 intergenic bin + chr3L 6995216 intergenic not near genes chr3L 6995540 intergenic not near genes chr3L_4_6995001 chr3L_6995001 RAL-900_95b 480 chr3L 7033053 7033086 chr3L 7033150 7033154 5 83 1.5 0.5 1.0 2.5 101 chr3L 7033053 intron Mp + chr3L 7033104 intron Mp + chr3L 7033154 intron Mp + chr3L_5_7030001 chr3L_7030001 RAL-900_95b 481 chr3L 7079611 7079630 chr3L 7079681 7079708 6 74 1.5 2.5 2.0 2.0 97 chr3L 7079611 intergenic not near genes chr3L 7079660 intergenic not near genes chr3L 7079708 intergenic not near genes chr3L_6_7075001 chr3L_7075001 RAL-900_95b 482 chr3L 7793708 7793724 chr3L 7800780 7800796 297 5 7072 6.0 7.5 6.8 0.6 7088 chr3L 7793708 intron CG32369 - chr3L 7797252 intron CG32369 - chr3L 7800796 intron CG32369 - chr3L_5_7795001 chr3L_7795001 RAL-900_95b 483 chr3L 7793732 7793744 chr3L 7800764 7800780 297 7 7042 3.0 7.0 5.0 1.2 7048 chr3L 7793732 intron CG32369 - chr3L 7797256 intron CG32369 - chr3L 7800780 intron CG32369 - chr3L_7_7795001 chr3L_7795001 RAL-900_95b 484 chr3L 7857348 7857370 chr3L 7857458 7857480 5 110 8.5 4.0 6.2 0.7 132 chr3L 7857348 intron Pdp1 - chr3L 7857414 intron Pdp1 - chr3L 7857480 intron Pdp1 - chr3L_5_7855001 chr3L_7855001 RAL-900_95b 485 chr3L 7858613 7858644 chr3L 7858735 7858736 4 108 4.0 4.5 4.2 0.8 123 chr3L 7858613 intron Pdp1 - chr3L 7858674 intron Pdp1 - chr3L 7858736 intron Pdp1 - chr3L_4_7855001 chr3L_7855001 RAL-900_95b 486 chr3L 7886521 7886543 chr3L 7889038 7889058 Stalker4 4 2525 2.0 1.0 1.5 1.6 2537 chr3L 7886521 intron CG32365 + chr3L 7887790 intron CG32365 + chr3L 7889058 intron CG32365 + chr3L_4_7885001 chr3L_7885001 RAL-900_95b 487 chr3L 7916820 7916857 chr3L 7926001 7926013 roo 8 9177 3.5 5.5 4.5 1.5 9193 chr3L 7916820 3` UTR syd - chr3L 7921416 intron syd - chr3L 7926013 3` UTR syd - chr3L_8_7920001 chr3L_7920001 RAL-900_95b 488 chr3L 7985387 7985395 chr3L 7987695 7987709 NOF 4 2322 2.0 4.5 3.2 1.0 2322 chr3L 7985387 intron nmo + chr3L 7986548 intron nmo + chr3L 7987709 intron nmo + chr3L_4_7985001 chr3L_7985001 RAL-900_95b 489 chr3L 8166105 8166140 chr3L 8166343 8166363 5 231 2.5 2.5 2.5 1.4 258 chr3L 8166105 intergenic not near genes chr3L 8166234 intergenic not near genes chr3L 8166363 intergenic not near genes chr3L_5_8165001 chr3L_8165001 RAL-900_95b 490 chr3L 8442919 8442947 chr3L 8443015 8443048 6 94 1.0 5.5 3.2 1.4 129 chr3L 8442919 intergenic CG6983 - chr3L 8442984 intergenic CG6983 - chr3L 8443048 3` UTR CG6983 - chr3L_6_8440001 chr3L_8440001 RAL-900_95b 491 chr3L 8498286 8498329 chr3L 8505773 8505791 blood 4 7481 6.0 7.0 6.5 0.5 7505 chr3L 8498286 intron CG43163 - chr3L 8502038 intron CG43163 - chr3L 8505791 intron CG43163 - chr3L_4_8500001 chr3L_8500001 RAL-900_95b 492 chr3L 8643572 8643598 chr3L 8643653 8643664 5 80 1.5 2.5 2.0 1.7 92 chr3L 8643572 3` UTR Cpr66D + chr3L 8643618 intergenic Cpr66D + chr3L 8643664 intergenic Cpr66D + chr3L_5_8640001 chr3L_8640001 RAL-900_95b 493 chr3L 8791258 8791305 chr3L 8796698 8796705 I-element 6 5420 1.5 1.0 1.2 2.7 5447 chr3L 8791258 exon Fhos + chr3L 8793982 intron Fhos + chr3L 8796705 intron Fhos + chr3L_6_8790001 chr3L_8790001 RAL-900_95b 494 chr3L 8950554 8950582 chr3L 8950638 8950661 5 85 2.0 2.5 2.2 1.6 107 chr3L 8950554 intron,intron CG43783 -,orb2 - chr3L 8950608 intron,intron CG43783 -,orb2 - chr3L 8950661 intron,intron CG43783 -,orb2 - chr3L_5_8950001 chr3L_8950001 RAL-900_95b 495 chr3L 9076936 9076959 chr3L 9084485 9084508 412 7 7565 2.0 2.5 2.2 2.2 7572 chr3L 9076936 exon Tequila + chr3L 9080722 intron Tequila + chr3L 9084508 exon Tequila + chr3L_7_9080001 chr3L_9080001 RAL-900_95b 496 chr3L 9164698 9164720 chr3L 9166160 9166172 hobo 6 1465 3.0 3.0 3.0 1.5 1474 chr3L 9164698 intron Rdl - chr3L 9165435 intron Rdl - chr3L 9166172 intron Rdl - chr3L_6_9165001 chr3L_9165001 RAL-900_95b 497 chr3L 9347404 9347411 chr3L 9347471 9347508 4 83 4.5 1.5 3.0 1.0 104 chr3L 9347404 intron PGRP-LC + chr3L 9347456 intron PGRP-LC + chr3L 9347508 intron PGRP-LC + chr3L_4_9345001 chr3L_9345001 RAL-900_95b 498 chr3L 9359606 9359619 chr3L 9359686 9359698 4 92 5.0 4.0 4.5 0.7 92 chr3L 9359606 3` UTR CG32039 + chr3L 9359652 3` UTR CG32039 + chr3L 9359698 3` UTR CG32039 + chr3L_4_9355001 chr3L_9355001 RAL-900_95b 499 chr3L 9443512 9443530 chr3L 9445303 9445305 S-element 4 1788 2.5 2.0 2.2 1.2 1793 chr3L 9443512 intron CG33926 + chr3L 9444408 intron CG33926 + chr3L 9445305 intron CG33926 + chr3L_4_9440001 chr3L_9440001 RAL-900_95b 500 chr3L 9443533 9443540 chr3L 9445300 9445305 S-element 5 1775 1.0 2.0 1.5 2.0 1772 chr3L 9443533 intron CG33926 + chr3L 9444419 intron CG33926 + chr3L 9445305 intron CG33926 + chr3L_5_9440001 chr3L_9440001 RAL-900_95b 501 chr3L 9498180 9498230 chr3L 9498277 9498297 10 88 5.0 1.5 3.2 2.4 117 chr3L 9498180 intron path - chr3L 9498238 intron path - chr3L 9498297 intron path - chr3L_10_9495001 chr3L_9495001 RAL-900_95b 502 chr3L 9501707 9501732 chr3L 9502193 9502193 roo 5 482 2.5 0.5 1.5 2.0 486 chr3L 9501707 intron path - chr3L 9501950 intron path - chr3L 9502193 intron path - chr3L_5_9500001 chr3L_9500001 RAL-900_95b 503 chr3L 9575890 9575936 chr3L 9580988 9580999 jockey 4 5083 5.5 0.5 3.0 1.0 5109 chr3L 9575890 intron CG42673 + chr3L 9578444 intron CG42673 + chr3L 9580999 intron CG42673 + chr3L_4_9575001 chr3L_9575001 RAL-900_95b 504 chr3L 9652780 9652804 chr3L 9653001 9653024 4 224 4.5 3.0 3.8 0.8 244 chr3L 9652780 intron,intron fry -,CG33696 + chr3L 9652902 intron,intron fry -,CG33696 + chr3L 9653024 intron,intron fry -,CG33696 + chr3L_4_9650001 chr3L_9650001 RAL-900_95b 505 chr3L 9966790 9966809 chr3L 9970305 9970320 6 3507 27.5 15.0 21.2 0.3 3530 chr3L 9966790 3` UTR,3` UTR CG34356 +,CG6685 - chr3L 9968555 5` UTR Nc + chr3L 9970320 exon Nc + chr3L_6_9965001 chr3L_9965001 RAL-900_95b 506 chr3L 10204060 10204087 chr3L 10204219 10204247 7 158 6.5 1.5 4.0 1.4 187 chr3L 10204060 intergenic not near genes chr3L 10204154 intergenic not near genes chr3L 10204247 intergenic not near genes chr3L_7_10200001 chr3L_10200001 RAL-900_95b 507 chr3L 10214793 10214829 chr3L 10214914 10214941 9 120 1.0 2.0 1.5 3.6 148 chr3L 10214793 intergenic not near genes chr3L 10214867 intergenic not near genes chr3L 10214941 intergenic not near genes chr3L_9_10210001 chr3L_10210001 RAL-900_95b 508 chr3L 10298691 10298700 chr3L 10298758 10298766 5 73 2.0 1.5 1.8 1.8 75 chr3L 10298691 intergenic not near genes chr3L 10298728 intergenic not near genes chr3L 10298766 intergenic not near genes chr3L_5_10295001 chr3L_10295001 RAL-900_95b 509 chr3L 10390243 10390264 chr3L 10390349 10390367 5 109 0.5 5.5 3.0 1.2 124 chr3L 10390243 intergenic not near genes chr3L 10390305 intergenic not near genes chr3L 10390367 intergenic not near genes chr3L_5_10390001 chr3L_10390001 RAL-900_95b 510 chr3L 10414956 10414977 chr3L 10417312 10417339 Doc 5 2356 2.5 2.5 2.5 1.4 2383 chr3L 10414956 intergenic CG12362 + chr3L 10416148 intergenic not near genes chr3L 10417339 intergenic not near genes chr3L_5_10415001 chr3L_10415001 RAL-900_95b 511 chr3L 10584261 10584299 chr3L 10584368 10584403 6 100 9.0 4.0 6.5 0.8 142 chr3L 10584261 intron A2bp1 + chr3L 10584332 intron A2bp1 + chr3L 10584403 intron A2bp1 + chr3L_6_10580001 chr3L_10580001 RAL-900_95b 512 chr3L 10621854 10621878 chr3L 10621941 10621950 4 84 4.5 4.0 4.2 0.8 96 chr3L 10621854 intergenic not near genes chr3L 10621902 intergenic not near genes chr3L 10621950 intergenic not near genes chr3L_4_10620001 chr3L_10620001 RAL-900_95b 513 chr3L 10658079 10658092 chr3L 10658176 10658189 6 97 1.0 2.0 1.5 2.4 110 chr3L 10658079 intron CG32066 - chr3L 10658134 intron CG32066 - chr3L 10658189 intron CG32066 - chr3L_6_10655001 chr3L_10655001 RAL-900_95b 514 chr3L 10658097 10658207 chr3L 10658158 10658326 11 117 2.0 2.0 2.0 3.7 229 chr3L 10658097 intron CG32066 - chr3L 10658212 intron CG32066 - chr3L 10658326 intron CG32066 - chr3L_11_10655001 chr3L_10655001 RAL-900_95b 515 chr3L 10825515 10825554 chr3L 10825631 10825637 9 102 3.5 4.0 3.8 1.9 122 chr3L 10825515 5` UTR CR45246 + chr3L 10825576 5` UTR CR45246 + chr3L 10825637 intergenic CR45246 + chr3L_9_10825001 chr3L_10825001 RAL-900_95b 516 chr3L 10887365 10887379 chr3L 10887434 10887450 4 78 0.0 2.5 1.2 1.8 85 chr3L 10887365 intergenic not near genes chr3L 10887408 intergenic not near genes chr3L 10887450 intergenic not near genes chr3L_4_10885001 chr3L_10885001 RAL-900_95b 517 chr3L 11042105 11042119 chr3L 11042264 11042278 6 159 7.5 0.5 4.0 1.2 173 chr3L 11042105 intron CG43693 - chr3L 11042192 intron CG43693 - chr3L 11042278 intron CG43693 - chr3L_6_11040001 chr3L_11040001 RAL-900_95b 518 chr3L 11042140 11042154 chr3L 11042259 11042278 6 128 5.5 0.5 3.0 1.5 138 chr3L 11042140 intron CG43693 - chr3L 11042209 intron CG43693 - chr3L 11042278 intron CG43693 - chr3L_6_11040001 chr3L_11040001 RAL-900_95b 519 chr3L 11052354 11052359 chr3L 11052422 11052457 4 84 0.5 6.0 3.2 1.0 103 chr3L 11052354 intergenic not near genes chr3L 11052406 intergenic not near genes chr3L 11052457 intergenic not near genes chr3L_4_11050001 chr3L_11050001 RAL-900_95b 520 chr3L 11135508 11135806 chr3L 11135758 11135867 7 198 0.0 1.0 0.5 4.7 359 chr3L 11135508 intergenic CG14143 + chr3L 11135688 intergenic CG14143 +,CG32082 + chr3L 11135867 intergenic CG32082 +,CG14143 + chr3L_7_11135001 chr3L_11135001 RAL-900_95b 521 chr3L 11230007 11230018 chr3L 11230086 11230135 5 90 2.0 1.5 1.8 1.8 128 chr3L 11230007 intergenic CG42671 + chr3L 11230071 intergenic CG42671 + chr3L 11230135 intergenic CG42671 + chr3L_5_11230001 chr3L_11230001 RAL-900_95b 522 chr3L 11241770 11241792 chr3L 11241862 11241893 6 92 1.5 5.0 3.2 1.4 123 chr3L 11241770 intergenic not near genes chr3L 11241832 intergenic not near genes chr3L 11241893 intergenic not near genes chr3L_6_11240001 chr3L_11240001 RAL-900_95b 523 chr3L 11432895 11432940 chr3L 11432988 11433039 7 88 2.5 1.5 2.0 2.3 144 chr3L 11432895 intergenic not near genes chr3L 11432967 intergenic not near genes chr3L 11433039 intergenic not near genes chr3L_7_11430001 chr3L_11430001 RAL-900_95b 524 chr3L 11588743 11588753 chr3L 11588892 11588903 4 158 2.0 2.0 2.0 1.3 160 chr3L 11588743 intergenic not near genes chr3L 11588823 intergenic not near genes chr3L 11588903 intergenic not near genes chr3L_4_11585001 chr3L_11585001 RAL-900_95b 525 chr3L 11723114 11723116 chr3L 11727882 11727888 Doc 5 4790 2.0 3.0 2.5 1.4 4774 chr3L 11723114 3` UTR Bmcp + chr3L 11725501 intron Bmcp + chr3L 11727888 3` UTR Bmcp + chr3L_5_11725001 chr3L_11725001 RAL-900_95b 526 chr3L 11742587 11742614 chr3L 11742800 11742818 7 212 3.0 3.5 3.2 1.7 231 chr3L 11742587 intron CG6024 - chr3L 11742702 intron CG6024 - chr3L 11742818 intron CG6024 - chr3L_7_11740001 chr3L_11740001 RAL-900_95b 527 chr3L 11744004 11744044 chr3L 11744122 11744130 5 114 4.0 0.0 2.0 1.7 126 chr3L 11744004 exon CG6024 - chr3L 11744067 intron CG6024 - chr3L 11744130 intron CG6024 - chr3L_5_11740001 chr3L_11740001 RAL-900_95b 528 chr3L 7749470 7749471 chr3L 11777678 11777678 7 4028207 10.0 12.0 11.0 0.6 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_7_9760001 chr3L_9760001 RAL-900_95b 529 chr3L 11816805 11816820 chr3L 11816889 11816901 5 91 7.0 5.5 6.2 0.7 96 chr3L 11816805 3` UTR CG5946 - chr3L 11816853 3` UTR CG5946 - chr3L 11816901 3` UTR CG5946 - chr3L_5_11815001 chr3L_11815001 RAL-900_95b 530 chr3L 11864548 11864578 chr3L 11865847 11865858 pogo 9 1303 1.0 3.5 2.2 2.8 1310 chr3L 11864548 intron CG44837 - chr3L 11865203 intron CG44837 - chr3L 11865858 intron CG44837 - chr3L_9_11865001 chr3L_11865001 RAL-900_95b 531 chr3L 12052719 12052733 chr3L 12052793 12052840 4 88 3.0 3.5 3.2 1.0 121 chr3L 12052719 intron rols - chr3L 12052780 intron rols - chr3L 12052840 intron rols - chr3L_4_12050001 chr3L_12050001 RAL-900_95b 532 chr3L 12290265 12290287 chr3L 12290343 12290362 5 75 2.0 1.0 1.5 2.0 97 chr3L 12290265 intergenic CR45658 - chr3L 12290314 intergenic CR45658 - chr3L 12290362 intergenic CR45658 - chr3L_5_12290001 chr3L_12290001 RAL-900_95b 533 chr3L 12390978 12391005 chr3L 12391076 12391125 5 107 0.5 4.0 2.2 1.6 147 chr3L 12390978 5` UTR Ncc69 - chr3L 12391052 5` UTR Ncc69 - chr3L 12391125 5` UTR Ncc69 - chr3L_5_12390001 chr3L_12390001 RAL-900_95b 534 chr3L 12611001 12611025 chr3L 12611242 12611290 5 248 1.5 1.0 1.2 2.3 289 chr3L 12611001 intron caup + chr3L 12611146 intron caup + chr3L 12611290 intron caup + chr3L_5_12610001 chr3L_12610001 RAL-900_95b 535 chr3L 12626171 12626187 chr3L 12626280 12626281 4 108 2.0 0.0 1.0 2.0 110 chr3L 12626171 intergenic not near genes chr3L 12626226 intergenic not near genes chr3L 12626281 intergenic not near genes chr3L_4_12625001 chr3L_12625001 RAL-900_95b 536 chr3L 12668065 12668076 chr3L 12668170 12668181 4 105 1.0 2.0 1.5 1.6 116 chr3L 12668065 intergenic not near genes chr3L 12668123 intergenic not near genes chr3L 12668181 intergenic not near genes chr3L_4_12665001 chr3L_12665001 RAL-900_95b 537 chr3L 12957771 12957817 chr3L 12962268 12962269 copia 7 4480 2.5 3.5 3.0 1.8 4498 chr3L 12957771 intergenic not near genes chr3L 12960020 intergenic not near genes chr3L 12962269 intergenic not near genes chr3L_7_12960001 chr3L_12960001 RAL-900_95b 538 chr3L 12987365 12987386 chr3L 12987450 12987483 4 88 0.0 0.0 0.0 4.0 118 chr3L 12987365 intergenic not near genes chr3L 12987424 intergenic not near genes chr3L 12987483 intergenic not near genes chr3L_4_12985001 chr3L_12985001 RAL-900_95b 539 chr3L 13085052 13085070 chr3L 13085151 13085151 6 95 3.0 5.0 4.0 1.2 99 chr3L 13085052 intergenic not near genes chr3L 13085102 intergenic not near genes chr3L 13085151 intergenic not near genes chr3L_6_13085001 chr3L_13085001 RAL-900_95b 540 chr3L 13085072 13085084 chr3L 13085136 13085147 4 75 1.5 3.0 2.2 1.2 75 chr3L 13085072 intergenic not near genes chr3L 13085110 intergenic not near genes chr3L 13085147 intergenic not near genes chr3L_4_13085001 chr3L_13085001 RAL-900_95b 541 chr3L 13525165 13525185 chr3L 13532951 13533001 roo 7 7792 9.0 2.5 5.8 1.0 7836 chr3L 13525165 intergenic not near genes chr3L 13529083 intergenic not near genes chr3L 13533001 intergenic not near genes chr3L_7_13525001 chr3L_13525001 RAL-900_95b 542 chr3L 13648908 13648914 chr3L 13648983 13649019 5 96 3.5 2.5 3.0 1.2 111 chr3L 13648908 intron bru-3 - chr3L 13648964 intron bru-3 - chr3L 13649019 intron bru-3 - chr3L_5_13645001 chr3L_13645001 RAL-900_95b 543 chr3L 13804556 13804573 chr3L 13822831 13822844 roo 4 18276 6.0 1.0 3.5 0.9 18288 chr3L 13804556 intergenic not near genes chr3L 13813700 intergenic not near genes chr3L 13822844 intergenic not near genes chr3L_4_13810001 chr3L_13810001 RAL-900_95b 544 chr3L 14194703 14194738 chr3L 14194798 14194834 7 95 4.5 3.0 3.8 1.5 131 chr3L 14194703 intron nuf + chr3L 14194768 intron nuf + chr3L 14194834 intron nuf + chr3L_7_14190001 chr3L_14190001 RAL-900_95b 545 chr3L 14462889 14462905 chr3L 14462972 14463007 5 95 2.0 3.5 2.8 1.3 118 chr3L 14462889 intron bbg - chr3L 14462948 intron bbg - chr3L 14463007 intron bbg - chr3L_5_14460001 chr3L_14460001 RAL-900_95b 546 chr3L 14468458 14468477 chr3L 14473653 14473693 copia 11 5212 2.0 3.5 2.8 2.9 5235 chr3L 14468458 intron bbg - chr3L 14471076 intron bbg - chr3L 14473693 intron bbg - chr3L_11_14470001 chr3L_14470001 RAL-900_95b 547 chr3L 14546630 14546807 chr3L 14546690 14546888 4 71 0.5 4.5 2.5 1.1 258 chr3L 14546630 intron CG9238 - chr3L 14546759 intron CG9238 - chr3L 14546888 intron CG9238 - chr3L_4_14545001 chr3L_14545001 RAL-900_95b 548 chr3L 14549555 14549566 chr3L 14549664 14549675 4 112 9.0 5.5 7.2 0.5 120 chr3L 14549555 intron CG9238 - chr3L 14549615 intron CG9238 - chr3L 14549675 intron CG9238 - chr3L_4_14545001 chr3L_14545001 RAL-900_95b 549 chr3L 14549568 14549593 chr3L 14549657 14549707 4 93 3.0 3.5 3.2 1.0 139 chr3L 14549568 intron CG9238 - chr3L 14549638 intron CG9238 - chr3L 14549707 intron CG9238 - chr3L_4_14545001 chr3L_14545001 RAL-900_95b 550 chr3L 14602997 14603081 chr3L 14603069 14603130 5 70 0.5 0.5 0.5 3.3 133 chr3L 14602997 intergenic not near genes chr3L 14603064 intergenic not near genes chr3L 14603130 intergenic not near genes chr3L_5_14600001 chr3L_14600001 RAL-900_95b 551 chr3L 14820548 14820586 chr3L 14820651 14820664 4 95 5.0 0.5 2.8 1.1 116 chr3L 14820548 intron CG17839 + chr3L 14820606 intron CG17839 + chr3L 14820664 intron CG17839 + chr3L_4_14820001 chr3L_14820001 RAL-900_95b 552 chr3L 14839039 14839046 chr3L 14839140 14839155 4 107 4.0 7.0 5.5 0.6 116 chr3L 14839039 intron CG17839 + chr3L 14839097 intron CG17839 + chr3L 14839155 intron CG17839 + chr3L_4_14835001 chr3L_14835001 RAL-900_95b 553 chr3L 15048122 15048149 chr3L 15048466 15048493 4 344 24.5 22.0 23.2 0.2 371 chr3L 15048122 intron Sytbeta - chr3L 15048308 intron Sytbeta - chr3L 15048493 intron Sytbeta - chr3L_4_15045001 chr3L_15045001 RAL-900_95b 554 chr3L 15219753 15219775 chr3L 15219825 15219877 6 97 2.5 1.0 1.8 2.1 124 chr3L 15219753 intergenic not near genes chr3L 15219815 intergenic not near genes chr3L 15219877 intergenic not near genes chr3L_6_15215001 chr3L_15215001 RAL-900_95b 555 chr3L 15257410 15257446 chr3L 15257643 15257654 5 223 2.0 2.0 2.0 1.7 244 chr3L 15257410 intergenic not near genes chr3L 15257532 intergenic not near genes chr3L 15257654 intergenic not near genes chr3L_5_15255001 chr3L_15255001 RAL-900_95b 556 chr3L 15264038 15264085 chr3L 15264135 15264167 5 94 0.0 0.5 0.2 4.2 129 chr3L 15264038 intergenic not near genes chr3L 15264102 intergenic not near genes chr3L 15264167 intergenic not near genes chr3L_5_15260001 chr3L_15260001 RAL-900_95b 557 chr3L 15281987 15281996 chr3L 15282137 15282155 4 154 1.5 3.0 2.2 1.2 168 chr3L 15281987 intergenic not near genes chr3L 15282071 intergenic not near genes chr3L 15282155 intergenic not near genes chr3L_4_15280001 chr3L_15280001 RAL-900_95b 558 chr3L 15295764 15295792 chr3L 15298618 15298650 gypsy5 5 2853 3.5 3.5 3.5 1.1 2886 chr3L 15295764 intergenic not near genes chr3L 15297207 intergenic not near genes chr3L 15298650 intergenic Best4 + chr3L_5_15295001 chr3L_15295001 RAL-900_95b 559 chr3L 15679169 15679203 chr3L 15679511 15679540 4 334 8.5 12.0 10.2 0.4 371 chr3L 15679169 intergenic not near genes chr3L 15679354 intergenic CG7304 + chr3L 15679540 intergenic CG7304 + chr3L_4_15675001 chr3L_15675001 RAL-900_95b 560 chr3L 15754461 15754505 chr3L 15754573 15754607 4 101 0.0 2.0 1.0 2.0 146 chr3L 15754461 intergenic not near genes chr3L 15754534 intergenic not near genes chr3L 15754607 intergenic not near genes chr3L_4_15750001 chr3L_15750001 RAL-900_95b 561 chr3L 16070722 16070762 chr3L 16070819 16070829 4 82 1.5 0.0 0.8 2.2 107 chr3L 16070722 intron Mbs + chr3L 16070776 intron Mbs + chr3L 16070829 intron Mbs + chr3L_4_16070001 chr3L_16070001 RAL-900_95b 562 chr3L 16158814 16158836 chr3L 16158889 16158906 5 79 6.0 7.5 6.8 0.6 92 chr3L 16158814 intron CG5151 - chr3L 16158860 intron CG5151 - chr3L 16158906 intron CG5151 - chr3L_5_16155001 chr3L_16155001 RAL-900_95b 563 chr3L 16184092 16184114 chr3L 16188931 16188931 X-element 4 4831 10.5 4.0 7.2 0.5 4839 chr3L 16184092 intergenic not near genes chr3L 16186512 intergenic not near genes chr3L 16188931 intergenic not near genes chr3L_4_16185001 chr3L_16185001 RAL-900_95b 564 chr3L 16304860 16304881 chr3L 16304953 16304957 4 88 3.5 4.0 3.8 0.8 97 chr3L 16304860 intergenic CG43249 +,CG13043 - chr3L 16304908 intergenic CG43249 +,CG13043 - chr3L 16304957 intergenic CG13043 -,CG43249 + chr3L_4_16300001 chr3L_16300001 RAL-900_95b 565 chr3L 16311214 16311236 chr3L 16311332 16311354 4 118 7.0 5.5 6.2 0.6 140 chr3L 16311214 5` UTR CR32160 + chr3L 16311284 5` UTR CR32160 + chr3L 16311354 intergenic CR32160 + chr3L_4_16310001 chr3L_16310001 RAL-900_95b 566 chr3L 16311239 16311261 chr3L 16311327 16311361 9 98 3.5 4.0 3.8 1.9 122 chr3L 16311239 5` UTR CR32160 + chr3L 16311300 5` UTR CR32160 + chr3L 16311361 intergenic CR32160 + chr3L_9_16310001 chr3L_16310001 RAL-900_95b 567 chr3L 16340278 16340288 chr3L 16340391 16340396 4 120 1.5 1.5 1.5 1.6 118 chr3L 16340278 intron CG4998 + chr3L 16340337 intron CG4998 + chr3L 16340396 intron CG4998 + chr3L_4_16340001 chr3L_16340001 RAL-900_95b 568 chr3L 16431849 16431862 chr3L 16431964 16431972 4 111 3.0 1.5 2.2 1.2 123 chr3L 16431849 intron,intron CG33158 +,dsx-c73A - chr3L 16431910 intron,intron CG33158 +,dsx-c73A - chr3L 16431972 intron,intron CG33158 +,dsx-c73A - chr3L_4_16430001 chr3L_16430001 RAL-900_95b 569 chr3L 16493995 16494011 chr3L 16494491 16494527 jockey 6 508 5.5 4.5 5.0 1.0 532 chr3L 16493995 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494261 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494527 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_6_16490001 chr3L_16490001 RAL-900_95b 570 chr3L 16540038 16540056 chr3L 16540146 16540151 6 106 8.5 2.5 5.5 0.9 113 chr3L 16540038 intron CG43373 - chr3L 16540094 intron CG43373 - chr3L 16540151 intron CG43373 - chr3L_6_16540001 chr3L_16540001 RAL-900_95b 571 chr3L 16540063 16540072 chr3L 16540141 16540148 4 82 6.5 2.5 4.5 0.7 85 chr3L 16540063 intron CG43373 - chr3L 16540106 intron CG43373 - chr3L 16540148 intron CG43373 - chr3L_4_16540001 chr3L_16540001 RAL-900_95b 572 chr3L 16616494 16616542 chr3L 16621837 16621860 297 9 5327 2.0 1.5 1.8 3.2 5366 chr3L 16616494 3` UTR Abl - chr3L 16619177 3` UTR Abl - chr3L 16621860 3` UTR Abl - chr3L_9_16615001 chr3L_16615001 RAL-900_95b 573 chr3L 16684007 16684035 chr3L 16689247 16689256 copia 4 5236 2.5 6.5 4.5 0.7 5249 chr3L 16684007 intron,intron Lasp -,CG43954 - chr3L 16686632 intron,intron Lasp -,CG43954 - chr3L 16689256 intron,intron Lasp -,CG43954 - chr3L_4_16685001 chr3L_16685001 RAL-900_95b 574 chr3L 16714846 16714872 chr3L 16714930 16714970 7 88 6.0 6.0 6.0 1.0 124 chr3L 16714846 intron Dab + chr3L 16714908 intron Dab + chr3L 16714970 intron Dab + chr3L_7_16710001 chr3L_16710001 RAL-900_95b 575 chr3L 16817870 16817888 chr3L 16818030 16818032 5 152 4.5 7.5 6.0 0.7 162 chr3L 16817870 intron,intron nudC +,CG13024 - chr3L 16817951 intron,intron nudC +,CG13024 - chr3L 16818032 intron,intron nudC +,CG13024 - chr3L_5_16815001 chr3L_16815001 RAL-900_95b 576 chr3L 16845019 16845040 chr3L 16845147 16845159 4 128 2.5 4.0 3.2 1.0 140 chr3L 16845019 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845089 intergenic CG9669 -,CG9715 + chr3L 16845159 intergenic CG9669 -,CG9715 + chr3L_4_16845001 chr3L_16845001 RAL-900_95b 577 chr3L 17034922 17034954 chr3L 17035130 17035162 G2 4 205 3.5 5.0 4.2 0.8 240 chr3L 17034922 intergenic not near genes chr3L 17035042 intergenic not near genes chr3L 17035162 intergenic not near genes chr3L_4_17035001 chr3L_17035001 RAL-900_95b 578 chr3L 17084988 17085016 chr3L 17094157 17094160 roo 5 9164 6.0 2.0 4.0 1.0 9172 chr3L 17084988 intron Rbp6 - chr3L 17089574 intron Rbp6 - chr3L 17094160 intron Rbp6 - chr3L_5_17085001 chr3L_17085001 RAL-900_95b 579 chr3L 17149147 17149190 chr3L 17149248 17149251 5 87 13.5 9.5 11.5 0.4 104 chr3L 17149147 intron Rbp6 - chr3L 17149199 intron Rbp6 - chr3L 17149251 intron Rbp6 - chr3L_5_17145001 chr3L_17145001 RAL-900_95b 580 chr3L 17329256 17329294 chr3L 17329338 17329354 4 78 6.0 7.5 6.8 0.5 98 chr3L 17329256 intergenic Or74a - chr3L 17329305 intergenic Or74a - chr3L 17329354 intergenic Or74a - chr3L_4_17325001 chr3L_17325001 RAL-900_95b 581 chr3L 17331048 17331097 chr3L 17331158 17331174 5 98 7.0 5.0 6.0 0.7 126 chr3L 17331048 intergenic not near genes chr3L 17331111 intergenic not near genes chr3L 17331174 intergenic not near genes chr3L_5_17330001 chr3L_17330001 RAL-900_95b 582 chr3L 17730831 17730884 chr3L 17738178 17738185 mdg1 5 7325 7.5 5.5 6.5 0.7 7354 chr3L 17730831 intron Ccn + chr3L 17734508 intron Ccn + chr3L 17738185 intron Ccn + chr3L_5_17730001 chr3L_17730001 RAL-900_95b 583 chr3L 17748510 17748522 chr3L 17748576 17748598 4 75 13.5 10.5 12.0 0.3 88 chr3L 17748510 3` UTR Ccn + chr3L 17748554 3` UTR Ccn + chr3L 17748598 3` UTR Ccn + chr3L_4_17745001 chr3L_17745001 RAL-900_95b 584 chr3L 17790061 17790098 chr3L 17791803 17791810 7 1738 12.5 7.0 9.8 0.6 1749 chr3L 17790061 intergenic not near genes chr3L 17790936 intergenic CG42815 - chr3L 17791810 intergenic CG42816 -,CG42815 - chr3L_7_17790001 chr3L_17790001 RAL-900_95b 585 chr3L 17790225 17790478 chr3L 17790337 17790609 4 134 2.0 4.5 3.2 1.0 384 chr3L 17790225 intergenic not near genes chr3L 17790417 intergenic not near genes chr3L 17790609 intergenic CG42815 - chr3L_4_17790001 chr3L_17790001 RAL-900_95b 586 chr3L 17887858 17887878 chr3L 17887963 17887983 4 105 7.0 9.0 8.0 0.4 125 chr3L 17887858 intron CG7402 + chr3L 17887920 intron CG7402 + chr3L 17887983 intron CG7402 + chr3L_4_17885001 chr3L_17885001 RAL-900_95b 587 chr3L 18042237 18042508 chr3L 18042329 18042606 4 86 10.0 11.5 10.8 0.3 369 chr3L 18042237 intron Eip75B - chr3L 18042422 intron Eip75B - chr3L 18042606 intron Eip75B - chr3L_4_18040001 chr3L_18040001 RAL-900_95b 588 chr3L 18118211 18118232 chr3L 18118289 18118310 4 77 12.5 11.5 12.0 0.3 99 chr3L 18118211 3` UTR,intron CG32195 +,CG7341 + chr3L 18118260 3` UTR,intron CG32195 +,CG7341 + chr3L 18118310 3` UTR,intron CG32195 +,CG7341 + chr3L_4_18115001 chr3L_18115001 RAL-900_95b 589 chr3L 18172672 18172704 chr3L 18172768 18172800 8 92 1.5 4.0 2.8 2.1 128 chr3L 18172672 intron W - chr3L 18172736 intron W - chr3L 18172800 intron W - chr3L_8_18170001 chr3L_18170001 RAL-900_95b 590 chr3L 18198930 18198931 chr3L 24821493 24821494 4 6622563 0.0 8.0 4.0 0.8 6622564 chr3L 18198930 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_4_21510001 chr3L_21510001 RAL-900_95b 591 chr3L 18203579 18203628 chr3L 18203694 18203731 4 109 4.5 0.0 2.2 1.2 152 chr3L 18203579 3` UTR CG7320 + chr3L 18203655 intergenic CG7320 + chr3L 18203731 intergenic CG7320 + chr3L_4_18200001 chr3L_18200001 RAL-900_95b 592 chr3L 18248961 18248976 chr3L 18249049 18249059 4 96 3.5 2.5 3.0 1.0 98 chr3L 18248961 intergenic not near genes chr3L 18249010 intergenic not near genes chr3L 18249059 intergenic not near genes chr3L_4_18245001 chr3L_18245001 RAL-900_95b 593 chr3L 18408736 18408752 chr3L 18408822 18408858 4 95 13.0 11.0 12.0 0.3 122 chr3L 18408736 intergenic not near genes chr3L 18408797 intergenic not near genes chr3L 18408858 intergenic not near genes chr3L_4_18405001 chr3L_18405001 RAL-900_95b 594 chr3L 18506144 18506161 chr3L 18509591 18509597 F-element 4 3456 2.0 5.0 3.5 0.9 3453 chr3L 18506144 intergenic not near genes chr3L 18507870 intergenic not near genes chr3L 18509597 intergenic not near genes chr3L_4_18505001 chr3L_18505001 RAL-900_95b 595 chr3L 18514897 18514923 chr3L 18520098 18520103 BS 4 5200 10.0 8.0 9.0 0.4 5206 chr3L 18514897 intergenic not near genes chr3L 18517500 intergenic not near genes chr3L 18520103 intergenic not near genes chr3L_4_18515001 chr3L_18515001 RAL-900_95b 596 chr3L 18528608 18528660 chr3L 18537789 18537801 roo 4 9171 3.5 2.0 2.8 1.1 9193 chr3L 18528608 intergenic not near genes chr3L 18533204 intergenic not near genes chr3L 18537801 intergenic not near genes chr3L_4_18530001 chr3L_18530001 RAL-900_95b 597 chr3L 18593945 18593979 chr3L 18595935 18595943 Doc 5 1978 2.5 1.5 2.0 1.7 1998 chr3L 18593945 intergenic term - chr3L 18594944 intergenic not near genes chr3L 18595943 intergenic CR45389 + chr3L_5_18590001 chr3L_18590001 RAL-900_95b 598 chr3L 18602612 18602664 chr3L 18602716 18602726 5 79 4.0 3.5 3.8 1.0 114 chr3L 18602612 intron,intron CG13380 -,CG4174 - chr3L 18602669 intron,intron CG13380 -,CG4174 - chr3L 18602726 intron,intron CG13380 -,CG4174 - chr3L_5_18600001 chr3L_18600001 RAL-900_95b 599 chr3L 18710749 18710792 chr3L 18718721 18718725 Stalker2 5 7959 4.0 2.0 3.0 1.2 7976 chr3L 18710749 intergenic not near genes chr3L 18714737 intergenic not near genes chr3L 18718725 intergenic not near genes chr3L_5_18710001 chr3L_18710001 RAL-900_95b 600 chr3L 18772394 18772436 chr3L 18781095 18781126 roo 7 8697 3.0 1.5 2.2 2.2 8732 chr3L 18772394 intron ftz-f1 - chr3L 18776760 intron ftz-f1 - chr3L 18781126 intron ftz-f1 - chr3L_7_18775001 chr3L_18775001 RAL-900_95b 601 chr3L 18784384 18784405 chr3L 18784483 18784514 5 107 4.0 7.5 5.8 0.7 130 chr3L 18784384 intron ftz-f1 - chr3L 18784449 intron ftz-f1 - chr3L 18784514 intron ftz-f1 - chr3L_5_18780001 chr3L_18780001 RAL-900_95b 602 chr3L 18792559 18792596 chr3L 18792661 18792683 4 98 13.0 14.0 13.5 0.3 124 chr3L 18792559 intron ftz-f1 - chr3L 18792621 intron ftz-f1 - chr3L 18792683 intron ftz-f1 - chr3L_4_18790001 chr3L_18790001 RAL-900_95b 603 chr3L 18933612 18933657 chr3L 18933723 18933733 4 96 9.5 9.5 9.5 0.4 121 chr3L 18933612 intron CG32204 - chr3L 18933672 intron CG32204 - chr3L 18933733 intron CG32204 - chr3L_4_18930001 chr3L_18930001 RAL-900_95b 604 chr3L 18935831 18935863 chr3L 18935931 18935962 5 101 4.0 4.0 4.0 1.0 131 chr3L 18935831 intron CG32204 - chr3L 18935896 intron CG32204 - chr3L 18935962 intron CG32204 - chr3L_5_18935001 chr3L_18935001 RAL-900_95b 605 chr3L 18941251 18941296 chr3L 18941611 18941644 6 344 8.0 8.5 8.2 0.7 393 chr3L 18941251 intron CG32204 - chr3L 18941448 intron CG32204 - chr3L 18941644 intron CG32204 - chr3L_6_18940001 chr3L_18940001 RAL-900_95b 606 chr3L 18951031 18951079 chr3L 18951106 18951146 7 73 4.5 4.5 4.5 1.3 115 chr3L 18951031 intron CG6836 + chr3L 18951088 intron CG6836 + chr3L 18951146 intron CG6836 + chr3L_7_18950001 chr3L_18950001 RAL-900_95b 607 chr3L 18959979 18960026 chr3L 18960080 18960127 4 93 7.5 12.0 9.8 0.4 148 chr3L 18959979 intergenic not near genes chr3L 18960053 intergenic not near genes chr3L 18960127 intergenic not near genes chr3L_4_18960001 chr3L_18960001 RAL-900_95b 608 chr3L 19117052 19117074 chr3L 19124488 19124541 mdg1 4 7449 2.0 1.5 1.8 1.4 7489 chr3L 19117052 intron CG14082 - chr3L 19120796 intron CG14082 - chr3L 19124541 intron CG14082 - chr3L_4_19120001 chr3L_19120001 RAL-900_95b 609 chr3L 19135101 19135116 chr3L 19135261 19135262 4 162 7.0 6.0 6.5 0.5 161 chr3L 19135101 intron CG14082 - chr3L 19135182 intron CG14082 - chr3L 19135262 intron CG14082 - chr3L_4_19135001 chr3L_19135001 RAL-900_95b 610 chr3L 19191497 19191543 chr3L 19191595 19191616 4 87 5.5 8.5 7.0 0.5 119 chr3L 19191497 intron fz2 - chr3L 19191556 intron fz2 - chr3L 19191616 intron fz2 - chr3L_4_19190001 chr3L_19190001 RAL-900_95b 611 chr3L 19262201 19262240 chr3L 19262296 19262314 10 92 3.5 2.5 3.0 2.5 113 chr3L 19262201 3` UTR Bet1 + chr3L 19262258 3` UTR,3` UTR Bet1 +,Max - chr3L 19262314 3` UTR,3` UTR Bet1 +,Max - chr3L_10_19260001 chr3L_19260001 RAL-900_95b 612 chr3L 19291026 19291039 chr3L 19299529 19299545 5 8489 22.0 12.0 17.0 0.3 8519 chr3L 19291026 intron Gbs-76A - chr3L 19295286 intron fal + chr3L 19299545 3` UTR pip - chr3L_5_19295001 chr3L_19295001 RAL-900_95b 613 chr3L 19369563 19369607 chr3L 19369729 19369740 4 156 6.0 8.5 7.2 0.5 177 chr3L 19369563 intron CG32206 - chr3L 19369652 intron CG32206 - chr3L 19369740 intron CG32206 - chr3L_4_19365001 chr3L_19365001 RAL-900_95b 614 chr3L 19430410 19430435 chr3L 19430478 19430501 6 70 3.0 5.0 4.0 1.2 91 chr3L 19430410 intergenic not near genes chr3L 19430456 intergenic not near genes chr3L 19430501 intergenic not near genes chr3L_6_19430001 chr3L_19430001 RAL-900_95b 615 chr3L 19453194 19453230 chr3L 19453319 19453359 4 120 3.5 4.0 3.8 0.8 165 chr3L 19453194 intergenic not near genes chr3L 19453276 intergenic not near genes chr3L 19453359 intergenic not near genes chr3L_4_19450001 chr3L_19450001 RAL-900_95b 616 chr3L 19544219 19544269 chr3L 19544315 19544335 7 85 5.0 3.5 4.2 1.3 116 chr3L 19544219 intergenic CG9279 -,l(3)76BDr - chr3L 19544277 intergenic l(3)76BDr -,CG9279 - chr3L 19544335 intergenic l(3)76BDr -,CG9279 - chr3L_7_19540001 chr3L_19540001 RAL-900_95b 617 chr3L 19792342 19792373 chr3L 19792455 19792488 4 113 8.0 11.5 9.8 0.4 146 chr3L 19792342 intron,intron CG42637 -,Gyc76C - chr3L 19792415 intron,intron CG42637 -,Gyc76C - chr3L 19792488 intron,intron CG42637 -,Gyc76C - chr3L_4_19790001 chr3L_19790001 RAL-900_95b 618 chr3L 19981196 19981216 chr3L 19981290 19981311 7 94 6.5 5.5 6.0 1.0 115 chr3L 19981196 intergenic CG17732 + chr3L 19981254 intergenic CG17732 + chr3L 19981311 intergenic CG17732 + chr3L_7_19980001 chr3L_19980001 RAL-900_95b 619 chr3L 19981217 19981227 chr3L 19981289 19981292 4 76 5.0 5.5 5.2 0.6 75 chr3L 19981217 intergenic CG17732 + chr3L 19981254 intergenic CG17732 + chr3L 19981292 intergenic CG17732 + chr3L_4_19980001 chr3L_19980001 RAL-900_95b 620 chr3L 20096262 20096279 chr3L 20096374 20096407 4 122 3.5 6.0 4.8 0.7 145 chr3L 20096262 intergenic not near genes chr3L 20096334 intergenic not near genes chr3L 20096407 intergenic not near genes chr3L_4_20095001 chr3L_20095001 RAL-900_95b 621 chr3L 20113641 20113662 chr3L 20122917 20122939 roo 4 9276 4.5 4.5 4.5 0.7 9298 chr3L 20113641 intergenic not near genes chr3L 20118290 intergenic not near genes chr3L 20122939 intergenic not near genes chr3L_4_20115001 chr3L_20115001 RAL-900_95b 622 chr3L 20143087 20143110 chr3L 20143162 20143165 5 81 2.0 2.0 2.0 1.7 78 chr3L 20143087 intergenic not near genes chr3L 20143126 intergenic not near genes chr3L 20143165 intergenic not near genes chr3L_5_20140001 chr3L_20140001 RAL-900_95b 623 chr3L 20148303 20148318 chr3L 20148373 20148393 4 75 2.0 2.5 2.2 1.2 90 chr3L 20148303 intergenic not near genes chr3L 20148348 intergenic not near genes chr3L 20148393 intergenic not near genes chr3L_4_20145001 chr3L_20145001 RAL-900_95b 624 chr3L 20231124 20231174 chr3L 20231275 20231290 7 137 7.0 5.5 6.2 1.0 166 chr3L 20231124 intergenic not near genes chr3L 20231207 intergenic CG13813 + chr3L 20231290 intergenic CG13813 + chr3L_7_20230001 chr3L_20230001 RAL-900_95b 625 chr3L 20257320 20257360 chr3L 20258460 20258496 pogo 6 1123 2.0 5.5 3.8 1.2 1176 chr3L 20257320 intron rdgC + chr3L 20257908 intron rdgC + chr3L 20258496 intron rdgC + chr3L_6_20255001 chr3L_20255001 RAL-900_95b 626 chr3L 20476735 20476786 chr3L 20484353 20484395 springer 6 7606 7.5 2.0 4.8 1.0 7660 chr3L 20476735 3` UTR isoQC + chr3L 20480565 intergenic not near genes chr3L 20484395 3` UTR ZnT77C - chr3L_6_20480001 chr3L_20480001 RAL-900_95b 627 chr3L 13436145 13436194 chr3L 20815865 20815870 4 7379706 12.5 16.5 14.5 0.3 7379725 chr3L 13436145 intron CG10154 - chr3L 17126008 intron Rbp6 - chr3L 20815870 intron CG3618 - chr3L_4_17125001 chr3L_17125001 RAL-900_95b 628 chr3L 20849253 20849301 chr3L 20849352 20849365 10 85 3.0 5.5 4.2 1.9 112 chr3L 20849253 intron CG32432 - chr3L 20849309 intron CG32432 - chr3L 20849365 intron CG32432 - chr3L_10_20845001 chr3L_20845001 RAL-900_95b 629 chr3L 21082202 21082238 chr3L 21082300 21082307 5 83 8.0 7.0 7.5 0.6 105 chr3L 21082202 intron ko - chr3L 21082254 intron ko - chr3L 21082307 intron ko - chr3L_5_21080001 chr3L_21080001 RAL-900_95b 630 chr3L 21093779 21093807 chr3L 21093893 21093905 5 118 4.5 7.0 5.8 0.7 126 chr3L 21093779 intron ko - chr3L 21093842 intron ko - chr3L 21093905 intron ko - chr3L_5_21090001 chr3L_21090001 RAL-900_95b 631 chr3L 21130551 21130587 chr3L 21130765 21130787 4 210 8.5 9.5 9.0 0.4 236 chr3L 21130551 intron ko - chr3L 21130669 intron ko - chr3L 21130787 intron ko - chr3L_4_21130001 chr3L_21130001 RAL-900_95b 632 chr3L 21151850 21151895 chr3L 21156954 21156999 flea 6 5104 1.5 3.0 2.2 1.9 5149 chr3L 21151850 intron Ac78C - chr3L 21154424 intron Ac78C - chr3L 21156999 intron Ac78C - chr3L_6_21150001 chr3L_21150001 RAL-900_95b 633 chr3L 21306167 21306181 chr3L 21315305 21315325 roo 4 9142 5.0 2.0 3.5 0.9 9158 chr3L 21306167 3` UTR,3` UTR CG7632 +,Pc - chr3L 21310746 intron Pc - chr3L 21315325 3` UTR Pc - chr3L_4_21310001 chr3L_21310001 RAL-900_95b 634 chr3L 21498859 21498870 chr3L 21500469 21500479 1360 6 1611 1.5 3.5 2.5 1.7 1620 chr3L 21498859 intron Glg1 - chr3L 21499669 intron Glg1 - chr3L 21500479 intron Glg1 - chr3L_6_21495001 chr3L_21495001 RAL-900_95b 635 chr3L 21671064 21671084 chr3L 21671205 21671205 5 145 4.0 9.5 6.8 0.6 141 chr3L 21671064 intergenic not near genes chr3L 21671134 intergenic not near genes chr3L 21671205 intergenic not near genes chr3L_5_21670001 chr3L_21670001 RAL-900_95b 636 chr3L 21738628 21738649 chr3L 21738710 21738721 6 86 14.0 12.5 13.2 0.4 93 chr3L 21738628 intergenic CG14567 - chr3L 21738674 intergenic CG14567 - chr3L 21738721 intergenic CG14567 - chr3L_6_21735001 chr3L_21735001 RAL-900_95b 637 chr3L 21769035 21769084 chr3L 21769141 21769191 6 101 6.5 9.0 7.8 0.7 156 chr3L 21769035 intron,intron Syn1 -,CG42689 + chr3L 21769113 intron,intron Syn1 -,CG42689 + chr3L 21769191 intron,intron Syn1 -,CG42689 + chr3L_6_21765001 chr3L_21765001 RAL-900_95b 638 chr3L 22099696 22099708 chr3L 22105860 22105871 3S18 7 6178 4.0 2.5 3.2 1.7 6175 chr3L 22099696 intergenic not near genes chr3L 22102784 intergenic not near genes chr3L 22105871 intergenic not near genes chr3L_7_22100001 chr3L_22100001 RAL-900_95b 639 chr3L 22447215 22447234 chr3L 22447285 22447309 8 86 1.0 4.5 2.8 2.1 94 chr3L 22447215 intergenic not near genes chr3L 22447262 intergenic not near genes chr3L 22447309 intergenic not near genes chr3L_8_22445001 chr3L_22445001 RAL-900_95b 640 chr3L 22736344 22736374 chr3L 22738062 22738077 4 1713 5.0 8.5 6.8 0.5 1733 chr3L 22736344 intron CG11241 - chr3L 22737210 intron CG11241 - chr3L 22738077 intron CG11241 - chr3L_4_22735001 chr3L_22735001 RAL-900_95b 641 chr3L 22853477 22853706 chr3L 22853564 22853787 4 86 6.5 12.0 9.2 0.4 310 chr3L 22853477 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853632 5` UTR CR43426 + chr3L 22853787 5` UTR CR43426 + chr3L_4_22850001 chr3L_22850001 RAL-900_95b 642 chr3L 20525228 20525230 chr3L 22908066 22908066 6 2382837 7.5 21.5 14.5 0.4 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_6_21715001 chr3L_21715001 RAL-900_95b 643 chr3L 22908066 22908066 chr3L 24821490 24821496 12 1913427 23.0 8.5 15.8 0.7 1913430 chr3L 22908066 intergenic not near genes chr3L 23864781 intron CG40470 - chr3L 24821496 intergenic not near genes chr3L_12_23860001 chr3L_23860001 RAL-900_95b 644 chr3L 22908067 22908067 chr3L 24821492 24821494 16 1913426 23.0 8.0 15.5 1.0 1913427 chr3L 22908067 intergenic not near genes chr3L 23864780 intron CG40470 - chr3L 24821494 intergenic not near genes chr3L_16_23860001 chr3L_23860001 RAL-900_95b 645 chr3L 22909043 22909049 chr3L 22909113 22909120 4 73 6.5 3.5 5.0 0.7 77 chr3L 22909043 intergenic CR45661 + chr3L 22909082 intergenic CR45661 + chr3L 22909120 intergenic CR45661 + chr3L_4_22905001 chr3L_22905001 RAL-900_95b 646 chr3L 24012427 24012439 chr3L 24020747 24020776 roo 4 8326 1.0 3.0 2.0 1.3 8349 chr3L 24012427 intergenic not near genes chr3L 24016602 intergenic not near genes chr3L 24020776 intergenic not near genes chr3L_4_24015001 chr3L_24015001 RAL-900_95b 647 chr3R 4160230 4160231 chr3R 14983775 14983776 7 10823545 16.0 11.5 13.8 0.5 10823546 chr3R 4160230 intergenic CG40198 - chr3R 9572003 3` UTR CG9399 - chr3R 14983776 intergenic not near genes chr3R_7_9570001 chr3R_9570001 RAL-900_95b 648 chr3R 4206052 4206103 chr3R 4211645 4211688 mdg3 6 5581 4.0 3.0 3.5 1.3 5636 chr3R 4206052 intron CG14636 - chr3R 4208870 intron CG14636 - chr3R 4211688 intron CG14636 - chr3R_6_4205001 chr3R_4205001 RAL-900_95b 649 chr3R 4366759 4366781 chr3R 4375152 4375175 roo 4 8398 6.5 8.0 7.2 0.5 8416 chr3R 4366759 3` UTR CG1090 + chr3R 4370967 intergenic not near genes chr3R 4375175 5` UTR CR44922 + chr3R_4_4370001 chr3R_4370001 RAL-900_95b 650 chr3R 4733660 4733706 chr3R 4733799 4733810 6 128 16.0 15.0 15.5 0.4 150 chr3R 4733660 intergenic not near genes chr3R 4733735 intergenic not near genes chr3R 4733810 intergenic not near genes chr3R_6_4730001 chr3R_4730001 RAL-900_95b 651 chr3R 4770238 4770277 chr3R 4770335 4770341 5 88 7.5 5.0 6.2 0.7 103 chr3R 4770238 intron,intron atms +,CG44098 - chr3R 4770290 intron,intron atms +,CG44098 - chr3R 4770341 intron,intron atms +,CG44098 - chr3R_5_4770001 chr3R_4770001 RAL-900_95b 652 chr3R 4966005 4966036 chr3R 4966116 4966116 4 101 5.5 4.5 5.0 0.7 111 chr3R 4966005 intron CG1124 + chr3R 4966060 intron CG1124 + chr3R 4966116 intron CG1124 + chr3R_4_4965001 chr3R_4965001 RAL-900_95b 653 chr3R 5000279 5000319 chr3R 5000406 5000443 7 123 8.0 4.5 6.2 1.0 164 chr3R 5000279 intron CG2022 - chr3R 5000361 intron CG2022 - chr3R 5000443 intron CG2022 - chr3R_7_5000001 chr3R_5000001 RAL-900_95b 654 chr3R 5067961 5068013 chr3R 5073497 5073508 mdg3 9 5529 6.5 3.5 5.0 1.5 5547 chr3R 5067961 intergenic not near genes chr3R 5070734 intergenic not near genes chr3R 5073508 intergenic not near genes chr3R_9_5070001 chr3R_5070001 RAL-900_95b 655 chr3R 5236227 5236246 chr3R 5236349 5236384 5 139 3.0 2.5 2.8 1.3 157 chr3R 5236227 3` UTR,3` UTR Mms19 +,rtp - chr3R 5236306 3` UTR rtp - chr3R 5236384 3` UTR rtp - chr3R_5_5235001 chr3R_5235001 RAL-900_95b 656 chr3R 5445948 5445989 chr3R 5452428 5452469 Burdock 4 6476 4.5 4.0 4.2 0.8 6521 chr3R 5445948 intron CG14669 + chr3R 5449208 intron CG14669 + chr3R 5452469 intron CG14669 + chr3R_4_5445001 chr3R_5445001 RAL-900_95b 657 chr3R 5747031 5747046 chr3R 5753200 5753234 diver 7 6181 3.0 3.0 3.0 1.8 6203 chr3R 5747031 intergenic Madm + chr3R 5750132 intergenic not near genes chr3R 5753234 intergenic CG2091 - chr3R_7_5750001 chr3R_5750001 RAL-900_95b 658 chr3R 5772375 5772409 chr3R 5772533 5772587 8 165 10.5 6.5 8.5 0.8 212 chr3R 5772375 intron CG2082 - chr3R 5772481 intron CG2082 - chr3R 5772587 intron CG2082 - chr3R_8_5770001 chr3R_5770001 RAL-900_95b 659 chr3R 5809105 5809143 chr3R 5809354 5809403 pogo 6 244 2.0 2.5 2.2 1.9 298 chr3R 5809105 3` UTR CG11000 + chr3R 5809254 3` UTR CG11000 + chr3R 5809403 3` UTR CG11000 + chr3R_6_5805001 chr3R_5805001 RAL-900_95b 660 chr3R 5954336 5954355 chr3R 5954399 5954421 5 71 9.0 10.0 9.5 0.5 85 chr3R 5954336 intron CG34113 - chr3R 5954378 intron CG34113 - chr3R 5954421 intron CG34113 - chr3R_5_5950001 chr3R_5950001 RAL-900_95b 661 chr3R 6171152 6171179 chr3R 6171512 6171561 6 374 6.0 10.0 8.0 0.7 409 chr3R 6171152 intergenic not near genes chr3R 6171356 intergenic not near genes chr3R 6171561 intergenic not near genes chr3R_6_6170001 chr3R_6170001 RAL-900_95b 662 chr3R 6175154 6175205 chr3R 6182446 6182466 HMS-Beagle2 7 7268 1.5 2.0 1.8 2.5 7312 chr3R 6175154 intergenic Osi1 + chr3R 6178810 intron CR45194 + chr3R 6182466 intergenic CR45194 + chr3R_7_6175001 chr3R_6175001 RAL-900_95b 663 chr3R 6428805 6428812 chr3R 6428912 6428924 4 116 9.0 2.0 5.5 0.6 119 chr3R 6428805 intron gpp + chr3R 6428864 intron gpp + chr3R 6428924 intron gpp + chr3R_4_6425001 chr3R_6425001 RAL-900_95b 664 chr3R 6428814 6428821 chr3R 6428911 6428933 4 106 8.5 2.0 5.2 0.6 119 chr3R 6428814 intron gpp + chr3R 6428874 intron gpp + chr3R 6428933 intron gpp + chr3R_4_6425001 chr3R_6425001 RAL-900_95b 665 chr3R 6780474 6780482 chr3R 6780533 6780550 4 73 3.5 2.0 2.8 1.1 76 chr3R 6780474 intergenic not near genes chr3R 6780512 intergenic not near genes chr3R 6780550 intergenic not near genes chr3R_4_6780001 chr3R_6780001 RAL-900_95b 666 chr3R 6782443 6782462 chr3R 6782512 6782514 7 76 6.0 5.5 5.8 1.0 71 chr3R 6782443 intergenic not near genes chr3R 6782478 intergenic not near genes chr3R 6782514 intergenic not near genes chr3R_7_6780001 chr3R_6780001 RAL-900_95b 667 chr3R 6807241 6807280 chr3R 6807343 6807346 4 80 5.5 3.5 4.5 0.7 105 chr3R 6807241 intergenic not near genes chr3R 6807294 intergenic not near genes chr3R 6807346 intergenic not near genes chr3R_4_6805001 chr3R_6805001 RAL-900_95b 668 chr3R 6862236 6862251 chr3R 6862311 6862352 5 87 3.5 4.5 4.0 1.0 116 chr3R 6862236 intergenic not near genes chr3R 6862294 intergenic not near genes chr3R 6862352 intergenic not near genes chr3R_5_6860001 chr3R_6860001 RAL-900_95b 669 chr3R 7092803 7092814 chr3R 7093354 7093361 4 556 1.0 3.0 2.0 1.3 558 chr3R 7092803 3` UTR CR43685 - chr3R 7093082 intron CR43685 - chr3R 7093361 3` UTR CR43685 - chr3R_4_7090001 chr3R_7090001 RAL-900_95b 670 chr3R 7105310 7105347 chr3R 7105413 7105416 4 90 7.5 7.0 7.2 0.5 106 chr3R 7105310 intron Alh - chr3R 7105363 intron Alh - chr3R 7105416 intron Alh - chr3R_4_7105001 chr3R_7105001 RAL-900_95b 671 chr3R 7126487 7126530 chr3R 7126601 7126625 6 108 2.5 5.0 3.8 1.2 138 chr3R 7126487 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126556 3` UTR CG10068 - chr3R 7126625 3` UTR CG10068 - chr3R_6_7125001 chr3R_7125001 RAL-900_95b 672 chr3R 7132852 7132873 chr3R 7132931 7132953 4 88 7.5 6.0 6.8 0.5 101 chr3R 7132852 intergenic CG31493 + chr3R 7132902 intergenic CG31493 + chr3R 7132953 intergenic CG31493 + chr3R_4_7130001 chr3R_7130001 RAL-900_95b 673 chr3R 7173659 7173706 chr3R 7173759 7173806 5 100 4.5 6.5 5.5 0.8 147 chr3R 7173659 intron sas + chr3R 7173732 intron sas + chr3R 7173806 intron sas + chr3R_5_7170001 chr3R_7170001 RAL-900_95b 674 chr3R 7677914 7677943 chr3R 7678033 7678041 4 116 2.5 3.0 2.8 1.1 127 chr3R 7677914 intron Nlg1 + chr3R 7677978 intron Nlg1 + chr3R 7678041 intron Nlg1 + chr3R_4_7675001 chr3R_7675001 RAL-900_95b 675 chr3R 7694574 7694603 chr3R 7713640 7713684 invader3 4 19071 2.5 4.5 3.5 0.9 19110 chr3R 7694574 3` UTR Nlg1 + chr3R 7704129 intergenic not near genes chr3R 7713684 intergenic not near genes chr3R_4_7700001 chr3R_7700001 RAL-900_95b 676 chr3R 7729461 7729499 chr3R 7737409 7737420 Stalker2 6 7936 0.5 4.5 2.5 1.7 7959 chr3R 7729461 intergenic not near genes chr3R 7733440 intergenic not near genes chr3R 7737420 intergenic not near genes chr3R_6_7730001 chr3R_7730001 RAL-900_95b 677 chr3R 7773344 7773344 chr3R 13217322 13217327 12 5443980 16.0 7.0 11.5 1.0 5443983 chr3R 7773344 intergenic not near genes chr3R 10495336 intergenic not near genes chr3R 13217327 intergenic not near genes chr3R_12_10495001 chr3R_10495001 RAL-900_95b 678 chr3R 7773344 7773344 chr3R 30278264 30278265 4 22504921 16.0 7.0 11.5 0.3 22504921 chr3R 7773344 intergenic not near genes chr3R 19025804 exon CG14285 + chr3R 30278265 5` UTR hdc + chr3R_4_19025001 chr3R_19025001 RAL-900_95b 679 chr3R 7857562 7857671 chr3R 7857669 7857736 8 91 4.5 6.0 5.2 1.3 174 chr3R 7857562 3` UTR CG17816 - chr3R 7857649 3` UTR CG17816 - chr3R 7857736 3` UTR CG17816 - chr3R_8_7855001 chr3R_7855001 RAL-900_95b 680 chr3R 7773344 7773344 chr3R 7890529 7890535 9 117187 16.0 6.5 11.2 0.7 117191 chr3R 7773344 intergenic not near genes chr3R 7831940 intron CG34384 + chr3R 7890535 intron mRpS9 - chr3R_9_7830001 chr3R_7830001 RAL-900_95b 681 chr3R 7973328 7973338 chr3R 7974375 7974420 1360 5 1061 4.0 2.0 3.0 1.2 1092 chr3R 7973328 intergenic not near genes chr3R 7973874 intergenic not near genes chr3R 7974420 3` UTR CD98hc - chr3R_5_7970001 chr3R_7970001 RAL-900_95b 682 chr3R 8090547 8090558 chr3R 8094043 8094045 297 4 3492 5.0 5.0 5.0 0.7 3498 chr3R 8090547 intergenic CR44330 + chr3R 8092296 intergenic not near genes chr3R 8094045 intergenic CG7900 + chr3R_4_8090001 chr3R_8090001 RAL-900_95b 683 chr3R 8094398 8094414 chr3R 8099718 8099739 Transpac 5 5324 4.5 3.0 3.8 1.0 5341 chr3R 8094398 intron CG7900 + chr3R 8097068 intron CG7900 + chr3R 8099739 intron CG7900 + chr3R_5_8095001 chr3R_8095001 RAL-900_95b 684 chr3R 8094416 8094436 chr3R 8099711 8099731 Transpac 9 5307 3.0 1.5 2.2 2.8 5315 chr3R 8094416 intron CG7900 + chr3R 8097074 intron CG7900 + chr3R 8099731 intron CG7900 + chr3R_9_8095001 chr3R_8095001 RAL-900_95b 685 chr3R 8339246 8339247 chr3R 21907535 21907536 4 13568289 9.5 12.0 10.8 0.3 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_4_15120001 chr3R_15120001 RAL-900_95b 686 chr3R 8601786 8601794 chr3R 8610917 8610962 roo 4 9142 3.5 0.5 2.0 1.3 9176 chr3R 8601786 intron 5-HT2B + chr3R 8606374 intron 5-HT2B + chr3R 8610962 intron 5-HT2B + chr3R_4_8605001 chr3R_8605001 RAL-900_95b 687 chr3R 8707338 8707388 chr3R 8709799 8709813 jockey 4 2439 1.0 1.5 1.2 1.8 2475 chr3R 8707338 intergenic not near genes chr3R 8708576 intergenic not near genes chr3R 8709813 intergenic not near genes chr3R_4_8705001 chr3R_8705001 RAL-900_95b 688 chr3R 8932874 8932889 chr3R 8933127 8933142 4 253 10.5 4.5 7.5 0.5 268 chr3R 8932874 intergenic not near genes chr3R 8933008 intergenic not near genes chr3R 8933142 intergenic not near genes chr3R_4_8930001 chr3R_8930001 RAL-900_95b 689 chr3R 9067453 9067468 chr3R 9067517 9067543 8 72 7.0 7.5 7.2 1.0 90 chr3R 9067453 3` UTR pum - chr3R 9067498 3` UTR pum - chr3R 9067543 3` UTR pum - chr3R_8_9065001 chr3R_9065001 RAL-900_95b 690 chr3R 9149450 9149476 chr3R 9149527 9149540 5 76 4.0 4.0 4.0 1.0 90 chr3R 9149450 intron pum - chr3R 9149495 intron pum - chr3R 9149540 intron pum - chr3R_5_9145001 chr3R_9145001 RAL-900_95b 691 chr3R 9319592 9319606 chr3R 9320006 9320026 jockey 6 425 3.0 2.0 2.5 1.7 434 chr3R 9319592 intron CG8861 - chr3R 9319809 intron CG8861 - chr3R 9320026 intron CG8861 - chr3R_6_9315001 chr3R_9315001 RAL-900_95b 692 chr3R 9361810 9361828 chr3R 9362063 9362070 pogo 4 252 2.5 3.5 3.0 1.0 260 chr3R 9361810 3` UTR CG45050 + chr3R 9361940 3` UTR CG45050 + chr3R 9362070 3` UTR CG45050 + chr3R_4_9360001 chr3R_9360001 RAL-900_95b 693 chr3R 9361831 9361843 chr3R 9362062 9362088 pogo 5 243 1.0 3.5 2.2 1.6 257 chr3R 9361831 3` UTR CG45050 + chr3R 9361960 3` UTR CG45050 + chr3R 9362088 3` UTR CG45050 + chr3R_5_9360001 chr3R_9360001 RAL-900_95b 694 chr3R 9362968 9363002 chr3R 9363067 9363076 6 87 11.0 10.0 10.5 0.5 108 chr3R 9362968 3` UTR CG45050 + chr3R 9363022 intergenic CG45050 +,CG18473 + chr3R 9363076 intergenic CG45050 +,CG18473 + chr3R_6_9360001 chr3R_9360001 RAL-900_95b 695 chr3R 9644575 9644613 chr3R 9644676 9644714 4 100 10.5 12.0 11.2 0.3 139 chr3R 9644575 intron Dh44 + chr3R 9644644 intron Dh44 + chr3R 9644714 intron Dh44 + chr3R_4_9640001 chr3R_9640001 RAL-900_95b 696 chr3R 9648000 9648014 chr3R 9648444 9648458 4 443 8.5 11.5 10.0 0.4 458 chr3R 9648000 intron Dh44 + chr3R 9648229 intron Dh44 + chr3R 9648458 intron Dh44 + chr3R_4_9645001 chr3R_9645001 RAL-900_95b 697 chr3R 10231771 10231815 chr3R 10237368 10237372 mdg3 5 5584 4.5 2.5 3.5 1.1 5601 chr3R 10231771 intron CG42795 + chr3R 10234572 intron CG42795 + chr3R 10237372 intron CG42795 + chr3R_5_10230001 chr3R_10230001 RAL-900_95b 698 chr3R 10255366 10255378 chr3R 10260824 10260828 I-element 5 5458 8.0 5.5 6.8 0.6 5462 chr3R 10255366 3` UTR Sirt6 - chr3R 10258097 intron Sirt6 - chr3R 10260828 exon Sirt6 - chr3R_5_10255001 chr3R_10255001 RAL-900_95b 699 chr3R 10723755 10723794 chr3R 10723867 10723881 5 103 8.0 7.0 7.5 0.6 126 chr3R 10723755 intergenic not near genes chr3R 10723818 intergenic not near genes chr3R 10723881 intergenic not near genes chr3R_5_10720001 chr3R_10720001 RAL-900_95b 700 chr3R 10920074 10920078 chr3R 10920122 10920176 4 66 1.5 1.5 1.5 1.6 102 chr3R 10920074 intergenic not near genes chr3R 10920125 intergenic not near genes chr3R 10920176 intergenic not near genes chr3R_4_10920001 chr3R_10920001 RAL-900_95b 701 chr3R 11220286 11220310 chr3R 11220394 11220399 5 116 2.5 2.5 2.5 1.4 113 chr3R 11220286 3` UTR CG6693 - chr3R 11220342 3` UTR CG6693 - chr3R 11220399 3` UTR CG6693 - chr3R_5_11220001 chr3R_11220001 RAL-900_95b 702 chr3R 11664788 11664821 chr3R 11664883 11664898 6 88 4.5 4.0 4.2 1.2 110 chr3R 11664788 intron CG42327 + chr3R 11664843 intron CG42327 + chr3R 11664898 intron CG42327 + chr3R_6_11660001 chr3R_11660001 RAL-900_95b 703 chr3R 11694708 11694734 chr3R 11694821 11694827 6 109 4.5 2.0 3.2 1.4 119 chr3R 11694708 intergenic Fer3 - chr3R 11694768 intergenic Fer3 - chr3R 11694827 intergenic not near genes chr3R_6_11690001 chr3R_11690001 RAL-900_95b 704 chr3R 11740436 11740459 chr3R 11743528 11743546 4 3088 29.0 23.0 26.0 0.1 3110 chr3R 11740436 exon Blm - chr3R 11741991 5` UTR CG14722 + chr3R 11743546 exon CG14722 + chr3R_4_11740001 chr3R_11740001 RAL-900_95b 705 chr3R 11740434 11740450 chr3R 11743551 11743572 7 3110 24.5 18.0 21.2 0.3 3138 chr3R 11740434 exon Blm - chr3R 11742003 5` UTR CG14722 + chr3R 11743572 exon CG14722 + chr3R_7_11740001 chr3R_11740001 RAL-900_95b 706 chr3R 11853432 11853472 chr3R 11853586 11853633 6 156 0.5 4.5 2.5 1.7 201 chr3R 11853432 intron CG6959 - chr3R 11853532 intron CG6959 - chr3R 11853633 intron CG6959 - chr3R_6_11850001 chr3R_11850001 RAL-900_95b 707 chr3R 11853755 11853795 chr3R 11853880 11853905 7 119 5.0 7.5 6.2 1.0 150 chr3R 11853755 intron CG6959 - chr3R 11853830 intron CG6959 - chr3R 11853905 intron CG6959 - chr3R_7_11850001 chr3R_11850001 RAL-900_95b 708 chr3R 11920994 11921000 chr3R 11921071 11921112 7 95 4.0 2.0 3.0 1.8 118 chr3R 11920994 intron Cad87A - chr3R 11921053 intron Cad87A - chr3R 11921112 intron Cad87A - chr3R_7_11920001 chr3R_11920001 RAL-900_95b 709 chr3R 11998948 11998963 chr3R 11999083 11999090 4 130 2.0 3.0 2.5 1.1 142 chr3R 11998948 intron Tk - chr3R 11999019 intron Tk - chr3R 11999090 intron Tk - chr3R_4_11995001 chr3R_11995001 RAL-900_95b 710 chr3R 12022893 12022916 chr3R 12025060 12025113 pogo 5 2181 2.5 3.5 3.0 1.2 2220 chr3R 12022893 intergenic not near genes chr3R 12024003 intergenic not near genes chr3R 12025113 intergenic not near genes chr3R_5_12020001 chr3R_12020001 RAL-900_95b 711 chr3R 12029914 12029957 chr3R 12030021 12030064 6 96 1.5 1.5 1.5 2.4 150 chr3R 12029914 3` UTR,5` UTR,5` UTR CG31358 -,CG42504 -,CG42505 - chr3R 12029989 3` UTR,5` UTR,5` UTR CG31358 -,CG42504 -,CG42505 - chr3R 12030064 exon,5` UTR,5` UTR CG31358 -,CG42504 -,CG42505 - chr3R_6_12025001 chr3R_12025001 RAL-900_95b 712 chr3R 12045196 12045201 chr3R 12045252 12045297 5 70 1.5 5.0 3.2 1.2 101 chr3R 12045196 intergenic not near genes chr3R 12045246 intergenic not near genes chr3R 12045297 intergenic not near genes chr3R_5_12045001 chr3R_12045001 RAL-900_95b 713 chr3R 12082010 12082029 chr3R 12082071 12082073 6 70 0.5 1.0 0.8 3.3 63 chr3R 12082010 intron CG14741 - chr3R 12082042 intron CG14741 - chr3R 12082073 intron CG14741 - chr3R_6_12080001 chr3R_12080001 RAL-900_95b 714 chr3R 12267855 12267887 chr3R 12267940 12267951 6 82 3.0 3.0 3.0 1.5 96 chr3R 12267855 intron svp + chr3R 12267903 intron svp + chr3R 12267951 intron svp + chr3R_6_12265001 chr3R_12265001 RAL-900_95b 715 chr3R 12307217 12307234 chr3R 12307320 12307336 5 101 9.5 10.5 10.0 0.5 119 chr3R 12307217 intergenic not near genes chr3R 12307276 intergenic not near genes chr3R 12307336 intergenic not near genes chr3R_5_12305001 chr3R_12305001 RAL-900_95b 716 chr3R 12748990 12748994 chr3R 12749063 12749099 4 96 4.0 6.0 5.0 0.7 109 chr3R 12748990 intron beat-Vc - chr3R 12749044 intron beat-Vc - chr3R 12749099 intron beat-Vc - chr3R_4_12745001 chr3R_12745001 RAL-900_95b 717 chr3R 12943956 12944004 chr3R 12944063 12944111 4 107 15.5 14.5 15.0 0.2 155 chr3R 12943956 intergenic not near genes chr3R 12944034 intergenic not near genes chr3R 12944111 intergenic not near genes chr3R_4_12940001 chr3R_12940001 RAL-900_95b 718 chr3R 13067000 13067127 chr3R 13067094 13067188 5 91 1.5 1.0 1.2 2.3 188 chr3R 13067000 intron sim + chr3R 13067094 intron sim + chr3R 13067188 intron sim + chr3R_5_13065001 chr3R_13065001 RAL-900_95b 719 chr3R 13194104 13194124 chr3R 13194688 13194703 4 590 3.5 8.5 6.0 0.6 599 chr3R 13194104 intergenic not near genes chr3R 13194404 intergenic not near genes chr3R 13194703 intergenic not near genes chr3R_4_13190001 chr3R_13190001 RAL-900_95b 720 chr3R 13391623 13391669 chr3R 13391710 13391740 5 88 5.5 8.0 6.8 0.6 117 chr3R 13391623 intron CCHa2 - chr3R 13391682 intron CCHa2 - chr3R 13391740 intron CCHa2 - chr3R_5_13390001 chr3R_13390001 RAL-900_95b 721 chr3R 13603055 13603069 chr3R 13603150 13603158 4 99 1.0 4.0 2.5 1.1 103 chr3R 13603055 intergenic not near genes chr3R 13603106 intergenic not near genes chr3R 13603158 intergenic not near genes chr3R_4_13600001 chr3R_13600001 RAL-900_95b 722 chr3R 14021643 14021661 chr3R 14023488 14023506 S-element 4 1844 10.0 10.0 10.0 0.4 1863 chr3R 14021643 intron rdx - chr3R 14022574 intron rdx - chr3R 14023506 intron rdx - chr3R_4_14020001 chr3R_14020001 RAL-900_95b 723 chr3R 14067127 14067154 chr3R 14067226 14067252 8 94 1.5 2.0 1.8 2.9 125 chr3R 14067127 exon foxo + chr3R 14067190 intron foxo + chr3R 14067252 intron foxo + chr3R_8_14065001 chr3R_14065001 RAL-900_95b 724 chr3R 14117431 14117450 chr3R 14117526 14117530 4 90 7.0 7.0 7.0 0.5 99 chr3R 14117431 intron Kif19A - chr3R 14117480 intron Kif19A - chr3R 14117530 intron Kif19A - chr3R_4_14115001 chr3R_14115001 RAL-900_95b 725 chr3R 14117456 14117469 chr3R 14117512 14117553 7 71 4.0 4.0 4.0 1.4 97 chr3R 14117456 intron Kif19A - chr3R 14117504 intron Kif19A - chr3R 14117553 intron Kif19A - chr3R_7_14115001 chr3R_14115001 RAL-900_95b 726 chr3R 14180817 14180835 chr3R 14185577 14185590 F-element 6 4762 2.5 2.0 2.2 1.9 4773 chr3R 14180817 intron Dop1R1 - chr3R 14183204 intron Dop1R1 - chr3R 14185590 intron Dop1R1 - chr3R_6_14180001 chr3R_14180001 RAL-900_95b 727 chr3R 14686233 14686256 chr3R 14686619 14686631 4 379 2.5 5.0 3.8 0.8 398 chr3R 14686233 intron Meltrin - chr3R 14686432 intron Meltrin - chr3R 14686631 intron Meltrin - chr3R_4_14685001 chr3R_14685001 RAL-900_95b 728 chr3R 14704392 14704404 chr3R 14704463 14704470 5 75 4.5 2.0 3.2 1.2 78 chr3R 14704392 intron kibra - chr3R 14704431 intron kibra - chr3R 14704470 intron kibra - chr3R_5_14700001 chr3R_14700001 RAL-900_95b 729 chr3R 14771694 14771722 chr3R 14772241 14772259 4 536 31.5 17.0 24.2 0.2 565 chr3R 14771694 intron jvl + chr3R 14771976 intron jvl + chr3R 14772259 intron jvl + chr3R_4_14770001 chr3R_14770001 RAL-900_95b 730 chr3R 14898457 14898504 chr3R 14898597 14898644 8 124 1.0 2.5 1.8 2.9 187 chr3R 14898457 intergenic Nup93-2 -,CG3817 + chr3R 14898550 intergenic Nup93-2 -,CG3817 + chr3R 14898644 intergenic CG3817 +,Nup93-2 - chr3R_8_14895001 chr3R_14895001 RAL-900_95b 731 chr3R 14911572 14911589 chr3R 14911677 14911708 5 106 2.5 0.5 1.5 2.0 136 chr3R 14911572 intergenic not near genes chr3R 14911640 intergenic not near genes chr3R 14911708 intergenic not near genes chr3R_5_14910001 chr3R_14910001 RAL-900_95b 732 chr3R 15006852 15006884 chr3R 15007243 15007243 8 382 3.5 6.5 5.0 1.3 391 chr3R 15006852 intergenic not near genes chr3R 15007048 intergenic not near genes chr3R 15007243 intergenic not near genes chr3R_8_15005001 chr3R_15005001 RAL-900_95b 733 chr3R 15037025 15037036 chr3R 15037089 15037138 6 79 2.5 1.5 2.0 2.0 113 chr3R 15037025 intergenic RpL10Aa + chr3R 15037082 intergenic RpL10Aa + chr3R 15037138 intergenic RpL10Aa + chr3R_6_15035001 chr3R_15035001 RAL-900_95b 734 chr3R 15041435 15041456 chr3R 15045191 15045191 Doc 6 3754 3.0 2.5 2.8 1.6 3756 chr3R 15041435 intergenic not near genes chr3R 15043313 intergenic not near genes chr3R 15045191 intergenic not near genes chr3R_6_15040001 chr3R_15040001 RAL-900_95b 735 chr3R 15049437 15049483 chr3R 15049583 15049626 8 132 3.0 3.0 3.0 2.0 189 chr3R 15049437 intergenic not near genes chr3R 15049532 intergenic not near genes chr3R 15049626 intergenic not near genes chr3R_8_15045001 chr3R_15045001 RAL-900_95b 736 chr3R 15071178 15071220 chr3R 15071313 15071340 12 137 3.5 5.5 4.5 2.2 162 chr3R 15071178 intron dpr9 - chr3R 15071259 intron dpr9 - chr3R 15071340 intron dpr9 - chr3R_12_15070001 chr3R_15070001 RAL-900_95b 737 chr3R 15079787 15079839 chr3R 15080048 15080060 pogo 7 244 4.0 0.0 2.0 2.3 273 chr3R 15079787 3` UTR CG6966 - chr3R 15079924 3` UTR CG6966 - chr3R 15080060 3` UTR CG6966 - chr3R_7_15075001 chr3R_15075001 RAL-900_95b 738 chr3R 15102504 15102528 chr3R 15109751 15109768 412 6 7252 2.0 4.0 3.0 1.5 7264 chr3R 15102504 intron CG42788 - chr3R 15106136 intron CG42788 - chr3R 15109768 intron CG42788 - chr3R_6_15105001 chr3R_15105001 RAL-900_95b 739 chr3R 15132056 15132089 chr3R 15135121 15135129 Juan 8 3053 3.5 19.0 11.2 0.7 3073 chr3R 15132056 intergenic CG42788 - chr3R 15133592 intergenic not near genes chr3R 15135129 intergenic CG6912 - chr3R_8_15130001 chr3R_15130001 RAL-900_95b 740 chr3R 15190639 15190681 chr3R 15190775 15190785 17 127 5.5 8.0 6.8 2.2 146 chr3R 15190639 3` UTR Gyc88E + chr3R 15190712 3` UTR Gyc88E + chr3R 15190785 3` UTR Gyc88E + chr3R_17_15190001 chr3R_15190001 RAL-900_95b 741 chr3R 15328309 15328347 chr3R 15328400 15328413 4 86 2.5 4.0 3.2 1.0 104 chr3R 15328309 intergenic CG6236 -,ea + chr3R 15328361 intergenic CG6236 -,ea + chr3R 15328413 intergenic CG6236 -,ea + chr3R_4_15325001 chr3R_15325001 RAL-900_95b 742 chr3R 15571257 15571497 chr3R 15571347 15571598 7 91 3.5 2.0 2.8 1.8 341 chr3R 15571257 intergenic not near genes chr3R 15571428 intergenic not near genes chr3R 15571598 intergenic not near genes chr3R_7_15570001 chr3R_15570001 RAL-900_95b 743 chr3R 15601172 15601196 chr3R 15608693 15608707 412 6 7524 4.5 4.0 4.2 1.2 7535 chr3R 15601172 intergenic not near genes chr3R 15604940 intergenic not near genes chr3R 15608707 intergenic not near genes chr3R_6_15600001 chr3R_15600001 RAL-900_95b 744 chr3R 15691286 15691319 chr3R 15691393 15691426 5 106 0.0 0.5 0.2 4.2 140 chr3R 15691286 intergenic not near genes chr3R 15691356 intergenic not near genes chr3R 15691426 intergenic not near genes chr3R_5_15690001 chr3R_15690001 RAL-900_95b 745 chr3R 15718420 15718443 chr3R 15724760 15724761 4 6340 17.5 6.5 12.0 0.3 6341 chr3R 15718420 intergenic not near genes chr3R 15721590 intergenic not near genes chr3R 15724761 intergenic not near genes chr3R_4_15720001 chr3R_15720001 RAL-900_95b 746 chr3R 16189391 16189440 chr3R 16189812 16189837 invader4 8 407 4.5 3.5 4.0 1.6 446 chr3R 16189391 intron sra + chr3R 16189614 intron sra + chr3R 16189837 intron sra + chr3R_8_16185001 chr3R_16185001 RAL-900_95b 747 chr3R 17294664 17294683 chr3R 17295112 17295131 BS 5 445 1.0 2.5 1.8 1.8 467 chr3R 17294664 intergenic not near genes chr3R 17294898 intergenic not near genes chr3R 17295131 intergenic not near genes chr3R_5_17290001 chr3R_17290001 RAL-900_95b 748 chr3R 17452555 17452576 chr3R 17452744 17452748 4 184 5.5 3.0 4.2 0.8 193 chr3R 17452555 intergenic not near genes chr3R 17452652 intergenic not near genes chr3R 17452748 intergenic not near genes chr3R_4_17450001 chr3R_17450001 RAL-900_95b 749 chr3R 17461185 17461217 chr3R 17461282 17461319 4 92 4.5 3.5 4.0 0.8 134 chr3R 17461185 intergenic not near genes chr3R 17461252 intergenic not near genes chr3R 17461319 intergenic not near genes chr3R_4_17460001 chr3R_17460001 RAL-900_95b 750 chr3R 17497958 17497972 chr3R 17498064 17498077 4 106 3.0 3.5 3.2 1.0 119 chr3R 17497958 intron Dscam3 - chr3R 17498018 intron Dscam3 - chr3R 17498077 intron Dscam3 - chr3R_4_17495001 chr3R_17495001 RAL-900_95b 751 chr3R 17507459 17507472 chr3R 17507527 17507570 4 80 3.5 5.5 4.5 0.7 111 chr3R 17507459 intergenic not near genes chr3R 17507514 intergenic not near genes chr3R 17507570 intergenic not near genes chr3R_4_17505001 chr3R_17505001 RAL-900_95b 752 chr3R 17734830 17734855 chr3R 17734964 17734989 5 134 3.0 1.5 2.2 1.6 159 chr3R 17734830 intergenic CG14321 + chr3R 17734910 intergenic not near genes chr3R 17734989 intergenic not near genes chr3R_5_17730001 chr3R_17730001 RAL-900_95b 753 chr3R 17823216 17823230 chr3R 17823296 17823299 4 81 2.0 3.0 2.5 1.1 83 chr3R 17823216 intron tinc + chr3R 17823258 intron tinc + chr3R 17823299 intron tinc + chr3R_4_17820001 chr3R_17820001 RAL-900_95b 754 chr3R 17895327 17895373 chr3R 17895436 17895484 6 108 3.0 0.0 1.5 2.4 157 chr3R 17895327 intron Rim - chr3R 17895406 intron Rim - chr3R 17895484 intron Rim - chr3R_6_17895001 chr3R_17895001 RAL-900_95b 755 chr3R 17925872 17925888 chr3R 17927318 17927323 hobo 4 1455 1.5 6.0 3.8 0.8 1451 chr3R 17925872 intron cpo + chr3R 17926598 intron cpo + chr3R 17927323 intron cpo + chr3R_4_17925001 chr3R_17925001 RAL-900_95b 756 chr3R 18061562 18061590 chr3R 18063150 18063178 F-element 7 1585 10.0 2.0 6.0 1.0 1616 chr3R 18061562 intergenic not near genes chr3R 18062370 intergenic not near genes chr3R 18063178 intergenic not near genes chr3R_7_18060001 chr3R_18060001 RAL-900_95b 757 chr3R 18061595 18061609 chr3R 18063148 18063172 F-element 5 1561 6.0 2.0 4.0 1.0 1577 chr3R 18061595 intergenic not near genes chr3R 18062384 intergenic not near genes chr3R 18063172 intergenic not near genes chr3R_5_18060001 chr3R_18060001 RAL-900_95b 758 chr3R 18078170 18078179 chr3R 18078234 18078273 5 84 2.5 6.5 4.5 0.9 103 chr3R 18078170 intergenic not near genes chr3R 18078222 intergenic not near genes chr3R 18078273 intergenic not near genes chr3R_5_18075001 chr3R_18075001 RAL-900_95b 759 chr3R 18501593 18501623 chr3R 18501669 18501722 5 85 3.0 3.5 3.2 1.2 129 chr3R 18501593 intron fru - chr3R 18501658 intron fru - chr3R 18501722 intron fru - chr3R_5_18500001 chr3R_18500001 RAL-900_95b 760 chr3R 18617698 18617742 chr3R 18617793 18617807 7 94 2.0 2.0 2.0 2.3 109 chr3R 18617698 intron,intron qin +,CG14304 - chr3R 18617752 intron,intron qin +,CG14304 - chr3R 18617807 intron,intron qin +,CG14304 - chr3R_7_18615001 chr3R_18615001 RAL-900_95b 761 chr3R 18721040 18721067 chr3R 18721197 18721201 4 151 1.0 0.0 0.5 2.7 161 chr3R 18721040 intron Cha + chr3R 18721120 intron Cha + chr3R 18721201 intron Cha + chr3R_4_18720001 chr3R_18720001 RAL-900_95b 762 chr3R 18785879 18785896 chr3R 18785941 18785947 4 63 3.0 2.5 2.8 1.1 68 chr3R 18785879 intron CG7720 - chr3R 18785913 intron CG7720 - chr3R 18785947 intron CG7720 - chr3R_4_18785001 chr3R_18785001 RAL-900_95b 763 chr3R 18812080 18812106 chr3R 18812162 18812179 9 80 2.0 4.0 3.0 2.2 99 chr3R 18812080 intron CG18208 - chr3R 18812130 intron CG18208 - chr3R 18812179 intron CG18208 - chr3R_9_18810001 chr3R_18810001 RAL-900_95b 764 chr3R 19248868 19248898 chr3R 19248953 19248962 4 67 0.0 1.0 0.5 2.7 94 chr3R 19248868 intergenic not near genes chr3R 19248915 intergenic not near genes chr3R 19248962 intergenic not near genes chr3R_4_19245001 chr3R_19245001 RAL-900_95b 765 chr3R 19276916 19276939 chr3R 19277016 19277034 5 99 3.5 2.5 3.0 1.2 118 chr3R 19276916 intergenic not near genes chr3R 19276975 intergenic not near genes chr3R 19277034 intergenic not near genes chr3R_5_19275001 chr3R_19275001 RAL-900_95b 766 chr3R 19344670 19344694 chr3R 19344800 19344849 5 140 3.0 2.5 2.8 1.3 179 chr3R 19344670 intergenic not near genes chr3R 19344760 intergenic not near genes chr3R 19344849 intergenic not near genes chr3R_5_19340001 chr3R_19340001 RAL-900_95b 767 chr3R 19394559 19394570 chr3R 19394648 19394695 5 109 1.5 2.5 2.0 1.7 136 chr3R 19394559 intron,exon Ino80 -,CG3739 + chr3R 19394627 intron,intron Ino80 -,CG3739 + chr3R 19394695 intron,exon Ino80 -,CG3739 + chr3R_5_19390001 chr3R_19390001 RAL-900_95b 768 chr3R 19418408 19418429 chr3R 19418500 19418501 5 94 4.5 2.0 3.2 1.2 93 chr3R 19418408 intron CG31221 + chr3R 19418454 intron CG31221 + chr3R 19418501 intron CG31221 + chr3R_5_19415001 chr3R_19415001 RAL-900_95b 769 chr3R 19430196 19430204 chr3R 19430313 19430330 4 122 2.5 1.0 1.8 1.4 134 chr3R 19430196 intron CG31221 + chr3R 19430263 intron CG31221 + chr3R 19430330 intron CG31221 + chr3R_4_19430001 chr3R_19430001 RAL-900_95b 770 chr3R 19602744 19602769 chr3R 19602842 19602867 4 96 7.0 5.0 6.0 0.6 123 chr3R 19602744 intergenic CG7333 + chr3R 19602806 intergenic CG7333 + chr3R 19602867 intergenic CG7333 + chr3R_4_19600001 chr3R_19600001 RAL-900_95b 771 chr3R 20008838 20008855 chr3R 20008904 20008916 6 78 2.0 2.0 2.0 2.0 78 chr3R 20008838 intergenic MED25 +,Hs6st - chr3R 20008877 intergenic MED25 +,Hs6st - chr3R 20008916 intergenic MED25 +,Hs6st - chr3R_6_20005001 chr3R_20005001 RAL-900_95b 772 chr3R 20041111 20041138 chr3R 20041211 20041225 5 100 4.0 1.5 2.8 1.3 114 chr3R 20041111 intron CG17193 - chr3R 20041168 intron CG17193 - chr3R 20041225 intron CG17193 - chr3R_5_20040001 chr3R_20040001 RAL-900_95b 773 chr3R 20077034 20077061 chr3R 20077135 20077167 4 105 3.5 5.0 4.2 0.8 133 chr3R 20077034 intergenic not near genes chr3R 20077100 intergenic not near genes chr3R 20077167 intergenic not near genes chr3R_4_20075001 chr3R_20075001 RAL-900_95b 774 chr3R 20124564 20124597 chr3R 20124657 20124689 5 98 2.5 1.0 1.8 1.8 125 chr3R 20124564 intergenic not near genes chr3R 20124626 intergenic not near genes chr3R 20124689 intergenic not near genes chr3R_5_20120001 chr3R_20120001 RAL-900_95b 775 chr3R 20156713 20156721 chr3R 20165858 20165872 roo 4 9161 3.0 4.0 3.5 0.9 9159 chr3R 20156713 intergenic not near genes chr3R 20161292 intergenic not near genes chr3R 20165872 intergenic not near genes chr3R_4_20160001 chr3R_20160001 RAL-900_95b 776 chr3R 20205566 20205591 chr3R 20205681 20205725 6 130 3.5 4.0 3.8 1.2 159 chr3R 20205566 intron Nlg4 + chr3R 20205646 intron Nlg4 + chr3R 20205725 intron Nlg4 + chr3R_6_20205001 chr3R_20205001 RAL-900_95b 777 chr3R 20222544 20222566 chr3R 20222764 20222766 7 219 6.0 1.5 3.8 1.5 222 chr3R 20222544 intron Nlg4 + chr3R 20222655 intron Nlg4 + chr3R 20222766 intron Nlg4 + chr3R_7_20220001 chr3R_20220001 RAL-900_95b 778 chr3R 20256859 20256869 chr3R 20256927 20256967 5 79 0.5 7.0 3.8 1.0 108 chr3R 20256859 intron cic + chr3R 20256913 intron cic + chr3R 20256967 intron cic + chr3R_5_20255001 chr3R_20255001 RAL-900_95b 779 chr3R 20266499 20266548 chr3R 20272990 20273004 Burdock 7 6481 1.5 5.0 3.2 1.7 6505 chr3R 20266499 intron cic + chr3R 20269752 intron cic + chr3R 20273004 intron cic + chr3R_7_20265001 chr3R_20265001 RAL-900_95b 780 chr3R 20282287 20282306 chr3R 20282367 20282402 5 92 0.0 3.0 1.5 2.0 115 chr3R 20282287 intron cic + chr3R 20282344 intron cic + chr3R 20282402 intron cic + chr3R_5_20280001 chr3R_20280001 RAL-900_95b 781 chr3R 20331013 20331031 chr3R 20331484 20331537 roo 6 478 4.0 5.5 4.8 1.0 524 chr3R 20331013 intergenic Sirt2 + chr3R 20331275 intergenic Sirt2 + chr3R 20331537 intergenic not near genes chr3R_6_20330001 chr3R_20330001 RAL-900_95b 782 chr3R 20512994 20513025 chr3R 20515705 20515748 opus 4 2720 6.0 1.0 3.5 0.9 2754 chr3R 20512994 intergenic not near genes chr3R 20514371 intergenic not near genes chr3R 20515748 intergenic not near genes chr3R_4_20510001 chr3R_20510001 RAL-900_95b 783 chr3R 20596172 20596210 chr3R 20596279 20596291 5 97 2.5 1.5 2.0 1.7 119 chr3R 20596172 intron bon + chr3R 20596232 intron bon + chr3R 20596291 intron bon + chr3R_5_20595001 chr3R_20595001 RAL-900_95b 784 chr3R 20850077 20850095 chr3R 20850182 20850200 4 104 0.5 5.0 2.8 1.1 123 chr3R 20850077 intergenic RpS30 + chr3R 20850138 intergenic RpS30 + chr3R 20850200 intergenic RpS30 + chr3R_4_20850001 chr3R_20850001 RAL-900_95b 785 chr3R 20870242 20870284 chr3R 20870337 20870389 6 82 2.0 3.0 2.5 1.7 147 chr3R 20870242 intergenic not near genes chr3R 20870316 intergenic not near genes chr3R 20870389 intergenic not near genes chr3R_6_20870001 chr3R_20870001 RAL-900_95b 786 chr3R 20972655 20972691 chr3R 20972753 20972783 6 90 6.5 4.0 5.2 1.0 128 chr3R 20972655 intron Atpalpha + chr3R 20972719 intron Atpalpha + chr3R 20972783 intron Atpalpha + chr3R_6_20970001 chr3R_20970001 RAL-900_95b 787 chr3R 21020378 21020433 chr3R 21020474 21020503 8 85 5.0 4.0 4.5 1.5 125 chr3R 21020378 3` UTR Rlip + chr3R 21020440 3` UTR Rlip + chr3R 21020503 3` UTR Rlip + chr3R_8_21020001 chr3R_21020001 RAL-900_95b 788 chr3R 21108019 21108066 chr3R 21108300 21108307 5 266 1.0 0.5 0.8 2.8 288 chr3R 21108019 intergenic Sec15 -,rtet + chr3R 21108163 intergenic Sec15 -,rtet + chr3R 21108307 intergenic rtet +,Sec15 - chr3R_5_21105001 chr3R_21105001 RAL-900_95b 789 chr3R 21330793 21330825 chr3R 21330892 21330893 10 91 1.0 2.5 1.8 3.6 100 chr3R 21330793 intron CG16791 - chr3R 21330843 intron CG16791 - chr3R 21330893 intron CG16791 - chr3R_10_21330001 chr3R_21330001 RAL-900_95b 790 chr3R 21385712 21385956 chr3R 21385781 21386028 5 74 0.0 0.5 0.2 4.2 316 chr3R 21385712 intergenic not near genes chr3R 21385870 intergenic not near genes chr3R 21386028 intergenic not near genes chr3R_5_21385001 chr3R_21385001 RAL-900_95b 791 chr3R 21903614 21903632 chr3R 21903731 21903749 4 116 0.0 4.0 2.0 1.3 135 chr3R 21903614 intron CG6678 + chr3R 21903682 intron CG6678 + chr3R 21903749 intron CG6678 + chr3R_4_21900001 chr3R_21900001 RAL-900_95b 792 chr3R 21907535 21907535 chr3R 28831801 28831802 6 6924266 13.5 7.0 10.2 0.5 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_6_25365001 chr3R_25365001 RAL-900_95b 793 chr3R 21937209 21937232 chr3R 21937306 21937329 4 97 0.5 3.0 1.8 1.4 120 chr3R 21937209 intergenic not near genes chr3R 21937269 intergenic not near genes chr3R 21937329 intergenic not near genes chr3R_4_21935001 chr3R_21935001 RAL-900_95b 794 chr3R 21952149 21952163 chr3R 21952222 21952266 5 90 5.5 5.0 5.2 0.8 117 chr3R 21952149 intron Eip93F + chr3R 21952208 intron Eip93F + chr3R 21952266 intron Eip93F + chr3R_5_21950001 chr3R_21950001 RAL-900_95b 795 chr3R 21985236 21985262 chr3R 21985335 21985370 4 107 2.0 3.5 2.8 1.1 134 chr3R 21985236 intron Eip93F + chr3R 21985303 intron Eip93F + chr3R 21985370 intron Eip93F + chr3R_4_21985001 chr3R_21985001 RAL-900_95b 796 chr3R 22117423 22117445 chr3R 22117491 22117506 6 67 3.5 3.0 3.2 1.4 83 chr3R 22117423 intergenic Ir94b -,Ir94c - chr3R 22117464 intergenic Ir94c -,Ir94b - chr3R 22117506 intergenic Ir94c -,Ir94b - chr3R_6_22115001 chr3R_22115001 RAL-900_95b 797 chr3R 22234693 22234714 chr3R 22236005 22236043 pogo 9 1319 0.5 3.0 1.8 3.2 1350 chr3R 22234693 intron SKIP + chr3R 22235368 intron SKIP + chr3R 22236043 intron SKIP + chr3R_9_22235001 chr3R_22235001 RAL-900_95b 798 chr3R 22428583 22428608 chr3R 22428653 22428673 6 68 1.0 3.0 2.0 2.0 90 chr3R 22428583 intron CG13847 - chr3R 22428628 intron CG13847 - chr3R 22428673 intron CG13847 - chr3R_6_22425001 chr3R_22425001 RAL-900_95b 799 chr3R 22623521 22623555 chr3R 22623619 22623627 8 94 1.0 2.5 1.8 2.9 106 chr3R 22623521 intron loco - chr3R 22623574 intron loco - chr3R 22623627 intron loco - chr3R_8_22620001 chr3R_22620001 RAL-900_95b 800 chr3R 22769104 22769120 chr3R 22769165 22769176 4 70 3.5 2.5 3.0 1.0 72 chr3R 22769104 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769140 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769176 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_4_22765001 chr3R_22765001 RAL-900_95b 801 chr3R 22842403 22842420 chr3R 22842487 22842490 4 88 2.0 0.5 1.2 1.8 87 chr3R 22842403 intergenic not near genes chr3R 22842446 intergenic not near genes chr3R 22842490 intergenic not near genes chr3R_4_22840001 chr3R_22840001 RAL-900_95b 802 chr3R 23064876 23064901 chr3R 23064982 23065012 4 110 0.5 7.5 4.0 0.8 136 chr3R 23064876 intron CG17111 - chr3R 23064944 intron CG17111 - chr3R 23065012 intron CG17111 - chr3R_4_23060001 chr3R_23060001 RAL-900_95b 803 chr3R 23260718 23260724 chr3R 23260816 23260822 4 94 22.0 16.5 19.2 0.2 104 chr3R 23260718 3` UTR orb - chr3R 23260770 3` UTR orb - chr3R 23260822 3` UTR orb - chr3R_4_23260001 chr3R_23260001 RAL-900_95b 804 chr3R 23277009 23277041 chr3R 23277585 23277614 5 576 1.5 2.0 1.8 1.8 605 chr3R 23277009 intron orb - chr3R 23277312 intron orb - chr3R 23277614 intron orb - chr3R_5_23275001 chr3R_23275001 RAL-900_95b 805 chr3R 23335415 23335466 chr3R 23335513 23335551 4 88 1.0 4.0 2.5 1.1 136 chr3R 23335415 intron pnt - chr3R 23335483 intron pnt - chr3R 23335551 intron pnt - chr3R_4_23335001 chr3R_23335001 RAL-900_95b 806 chr3R 23536930 23536979 chr3R 23537132 23537145 6 179 3.5 3.5 3.5 1.3 215 chr3R 23536930 intergenic CG10168 -,CG16732 - chr3R 23537038 3` UTR CG10168 - chr3R 23537145 exon CG10168 - chr3R_6_23535001 chr3R_23535001 RAL-900_95b 807 chr3R 23558415 23558424 chr3R 23560181 23560210 Bari1 5 1781 1.0 2.5 1.8 1.8 1795 chr3R 23558415 intron beat-IV + chr3R 23559312 intron beat-IV + chr3R 23560210 intron beat-IV + chr3R_5_23555001 chr3R_23555001 RAL-900_95b 808 chr3R 23626129 23626157 chr3R 23626233 23626236 4 102 1.0 2.5 1.8 1.4 107 chr3R 23626129 intron CG31145 - chr3R 23626182 intron CG31145 - chr3R 23626236 intron CG31145 - chr3R_4_23625001 chr3R_23625001 RAL-900_95b 809 chr3R 23835421 23835429 chr3R 23844591 23844599 roo 4 9170 2.5 6.5 4.5 0.7 9178 chr3R 23835421 intron CG34355 + chr3R 23840010 intron CG34355 + chr3R 23844599 intron CG34355 + chr3R_4_23840001 chr3R_23840001 RAL-900_95b 810 chr3R 23888071 23888089 chr3R 23888177 23888195 5 106 10.5 5.0 7.8 0.6 124 chr3R 23888071 intron Pli - chr3R 23888133 intron Pli - chr3R 23888195 intron Pli - chr3R_5_23885001 chr3R_23885001 RAL-900_95b 811 chr3R 23949060 23949064 chr3R 23949120 23949125 6 65 1.5 2.0 1.8 2.1 65 chr3R 23949060 intergenic not near genes chr3R 23949092 intergenic not near genes chr3R 23949125 intergenic not near genes chr3R_6_23945001 chr3R_23945001 RAL-900_95b 812 chr3R 24076924 24076940 chr3R 24078384 24078426 hobo 4 1469 1.0 1.5 1.2 1.8 1502 chr3R 24076924 intron 4EHP - chr3R 24077675 intron 4EHP - chr3R 24078426 intron 4EHP - chr3R_4_24075001 chr3R_24075001 RAL-900_95b 813 chr3R 24207225 24207245 chr3R 24212300 24212305 flea 4 5072 3.0 3.5 3.2 1.0 5080 chr3R 24207225 intron twin - chr3R 24209765 intron twin - chr3R 24212305 intron twin - chr3R_4_24205001 chr3R_24205001 RAL-900_95b 814 chr3R 24431580 24431617 chr3R 24431679 24431681 6 89 2.5 1.0 1.8 2.1 101 chr3R 24431580 intron nAChRalpha1 - chr3R 24431630 intron nAChRalpha1 - chr3R 24431681 intron nAChRalpha1 - chr3R_6_24430001 chr3R_24430001 RAL-900_95b 815 chr3R 24527785 24527834 chr3R 24527896 24527925 8 97 1.0 2.5 1.8 2.9 140 chr3R 24527785 intergenic CG13618 +,CG6607 + chr3R 24527855 intergenic CG6607 +,CG13618 + chr3R 24527925 intergenic CG6607 +,CG13618 + chr3R_8_24525001 chr3R_24525001 RAL-900_95b 816 chr3R 24667591 24667628 chr3R 24667686 24667713 4 94 3.0 0.0 1.5 1.6 122 chr3R 24667591 intron slo + chr3R 24667652 intron slo + chr3R 24667713 intron slo + chr3R_4_24665001 chr3R_24665001 RAL-900_95b 817 chr3R 24927131 24927161 chr3R 24931917 24931937 Doc 5 4793 1.0 2.0 1.5 2.0 4806 chr3R 24927131 intergenic Trf4-2 + chr3R 24929534 intergenic not near genes chr3R 24931937 intergenic CG11771 + chr3R_5_24925001 chr3R_24925001 RAL-900_95b 818 chr3R 24974895 24974932 chr3R 24974994 24975001 4 84 3.0 4.0 3.5 0.9 106 chr3R 24974895 intergenic not near genes chr3R 24974948 intergenic not near genes chr3R 24975001 intergenic not near genes chr3R_4_24970001 chr3R_24970001 RAL-900_95b 819 chr3R 25096902 25096912 chr3R 25097002 25097012 4 98 2.5 3.0 2.8 1.1 110 chr3R 25096902 intergenic not near genes chr3R 25096957 intergenic not near genes chr3R 25097012 intergenic not near genes chr3R_4_25095001 chr3R_25095001 RAL-900_95b 820 chr3R 25136379 25136412 chr3R 25136479 25136512 4 89 8.5 6.5 7.5 0.5 133 chr3R 25136379 3` UTR Bili + chr3R 25136446 3` UTR Bili + chr3R 25136512 3` UTR Bili + chr3R_4_25135001 chr3R_25135001 RAL-900_95b 821 chr3R 25166239 25166395 chr3R 25166339 25166466 5 74 1.0 6.5 3.8 1.0 227 chr3R 25166239 intergenic not near genes chr3R 25166352 intergenic not near genes chr3R 25166466 intergenic not near genes chr3R_5_25165001 chr3R_25165001 RAL-900_95b 822 chr3R 25374817 25374869 chr3R 25374915 25374926 6 84 6.0 3.5 4.8 1.0 109 chr3R 25374817 intron Fur1 - chr3R 25374872 intron Fur1 - chr3R 25374926 intron Fur1 - chr3R_6_25370001 chr3R_25370001 RAL-900_95b 823 chr3R 25377385 25377419 chr3R 25377493 25377526 5 104 10.0 11.0 10.5 0.4 141 chr3R 25377385 intron Fur1 - chr3R 25377456 intron Fur1 - chr3R 25377526 intron Fur1 - chr3R_5_25375001 chr3R_25375001 RAL-900_95b 824 chr3R 7773344 7773344 chr3R 25538124 25538124 7 17764780 16.0 5.5 10.8 0.6 17764780 chr3R 7773344 intergenic not near genes chr3R 16655734 intergenic modSP - chr3R 25538124 intron msi + chr3R_7_16655001 chr3R_16655001 RAL-900_95b 825 chr3R 25561405 25561434 chr3R 25561497 25561514 6 86 1.5 3.5 2.5 1.7 109 chr3R 25561405 intron msi + chr3R 25561460 intron msi + chr3R 25561514 intron msi + chr3R_6_25560001 chr3R_25560001 RAL-900_95b 826 chr3R 25590193 25590245 chr3R 25590317 25590331 6 102 7.0 6.0 6.5 0.8 138 chr3R 25590193 intron msi + chr3R 25590262 intron msi + chr3R 25590331 intron msi + chr3R_6_25590001 chr3R_25590001 RAL-900_95b 827 chr3R 25652300 25652345 chr3R 25652397 25652441 6 86 6.0 7.5 6.8 0.8 141 chr3R 25652300 intergenic not near genes chr3R 25652370 intergenic not near genes chr3R 25652441 intergenic not near genes chr3R_6_25650001 chr3R_25650001 RAL-900_95b 828 chr3R 25671265 25671272 chr3R 25671343 25671376 4 85 2.0 2.5 2.2 1.2 111 chr3R 25671265 intron Lgr3 + chr3R 25671320 intron Lgr3 + chr3R 25671376 intron Lgr3 + chr3R_4_25670001 chr3R_25670001 RAL-900_95b 829 chr3R 25720784 25720822 chr3R 25720896 25720896 4 92 5.0 4.5 4.8 0.7 112 chr3R 25720784 intron LpR2 - chr3R 25720840 intron LpR2 - chr3R 25720896 intron LpR2 - chr3R_4_25720001 chr3R_25720001 RAL-900_95b 830 chr3R 25725809 25725859 chr3R 25734989 25735037 roo 5 9179 2.5 2.0 2.2 1.6 9228 chr3R 25725809 intron LpR2 - chr3R 25730423 intron LpR2 - chr3R 25735037 intron LpR2 - chr3R_5_25730001 chr3R_25730001 RAL-900_95b 831 chr3R 25861807 25861846 chr3R 25861904 25861908 5 83 11.0 11.5 11.2 0.4 101 chr3R 25861807 intron CG5890 + chr3R 25861858 intron CG5890 + chr3R 25861908 intron CG5890 + chr3R_5_25860001 chr3R_25860001 RAL-900_95b 832 chr3R 26122452 26122475 chr3R 26122543 26122556 4 84 4.5 2.0 3.2 1.0 104 chr3R 26122452 intron CG31324 + chr3R 26122504 intron CG31324 + chr3R 26122556 intron CG31324 + chr3R_4_26120001 chr3R_26120001 RAL-900_95b 833 chr3R 26370324 26370359 chr3R 26370427 26370430 4 96 0.5 2.5 1.5 1.6 106 chr3R 26370324 intergenic not near genes chr3R 26370377 intergenic not near genes chr3R 26370430 intergenic not near genes chr3R_4_26370001 chr3R_26370001 RAL-900_95b 834 chr3R 26810566 26810586 chr3R 26811041 26811053 roo 6 475 3.5 1.5 2.5 1.7 487 chr3R 26810566 intron Tl + chr3R 26810810 intron Tl + chr3R 26811053 intron Tl + chr3R_6_26810001 chr3R_26810001 RAL-900_95b 835 chr3R 26845563 26845597 chr3R 26845652 26845693 4 88 1.5 4.0 2.8 1.1 130 chr3R 26845563 intron Lerp - chr3R 26845628 intron Lerp - chr3R 26845693 intron Lerp - chr3R_4_26845001 chr3R_26845001 RAL-900_95b 836 chr3R 26990869 26990920 chr3R 26990973 26991014 10 90 5.0 2.0 3.5 2.2 145 chr3R 26990869 intergenic not near genes chr3R 26990942 intergenic not near genes chr3R 26991014 intergenic not near genes chr3R_10_26990001 chr3R_26990001 RAL-900_95b 837 chr3R 27007426 27007438 chr3R 27016541 27016553 roo 5 9124 7.5 6.0 6.8 0.6 9127 chr3R 27007426 intron RYa-R + chr3R 27011990 intron RYa-R + chr3R 27016553 intron RYa-R + chr3R_5_27010001 chr3R_27010001 RAL-900_95b 838 chr3R 27027664 27027701 chr3R 27027768 27027768 5 86 3.5 3.0 3.2 1.2 104 chr3R 27027664 intron RYa-R + chr3R 27027716 intron RYa-R + chr3R 27027768 intron RYa-R + chr3R_5_27025001 chr3R_27025001 RAL-900_95b 839 chr3R 27028736 27028754 chr3R 27028802 27028853 6 80 1.0 3.0 2.0 2.0 117 chr3R 27028736 intron RYa-R + chr3R 27028794 intron RYa-R + chr3R 27028853 intron RYa-R + chr3R_6_27025001 chr3R_27025001 RAL-900_95b 840 chr3R 27041799 27041847 chr3R 27041909 27041927 9 98 3.0 4.0 3.5 2.0 128 chr3R 27041799 intron RYa-R + chr3R 27041863 intron RYa-R + chr3R 27041927 intron RYa-R + chr3R_9_27040001 chr3R_27040001 RAL-900_95b 841 chr3R 27342779 27342825 chr3R 27351380 27351406 Tirant 5 8592 2.0 2.5 2.2 1.6 8627 chr3R 27342779 intron CG42534 + chr3R 27347092 intron CG42534 + chr3R 27351406 intron CG42534 + chr3R_5_27345001 chr3R_27345001 RAL-900_95b 842 chr3R 27521144 27521167 chr3R 27530373 27530381 roo 4 9223 7.5 6.5 7.0 0.5 9237 chr3R 27521144 intron CG12885 + chr3R 27525762 intron CG12885 + chr3R 27530381 intron CG12885 + chr3R_4_27525001 chr3R_27525001 RAL-900_95b 843 chr3R 27521172 27521183 chr3R 27530366 27530375 roo 4 9211 5.5 4.5 5.0 0.7 9203 chr3R 27521172 intron CG12885 + chr3R 27525774 intron CG12885 + chr3R 27530375 intron CG12885 + chr3R_4_27525001 chr3R_27525001 RAL-900_95b 844 chr3R 27718591 27718600 chr3R 27718655 27718698 4 73 1.5 2.5 2.0 1.3 107 chr3R 27718591 intergenic not near genes chr3R 27718644 intergenic not near genes chr3R 27718698 intergenic not near genes chr3R_4_27715001 chr3R_27715001 RAL-900_95b 845 chr3R 27856746 27856780 chr3R 27858249 27858256 hopper2 6 1491 9.0 6.0 7.5 0.7 1510 chr3R 27856746 intron CG34353 - chr3R 27857501 intron CG34353 - chr3R 27858256 intron CG34353 - chr3R_6_27855001 chr3R_27855001 RAL-900_95b 846 chr3R 27875715 27875732 chr3R 27882755 27882790 297 6 7052 3.0 5.5 4.2 1.2 7075 chr3R 27875715 intron CG34353 - chr3R 27879252 intron CG34353 - chr3R 27882790 intron CG34353 - chr3R_6_27875001 chr3R_27875001 RAL-900_95b 847 chr3R 28068502 28068528 chr3R 28073937 28073965 I-element 5 5437 0.0 1.0 0.5 3.3 5463 chr3R 28068502 intron CG34362 + chr3R 28071234 intron CG34362 + chr3R 28073965 intron CG34362 + chr3R_5_28070001 chr3R_28070001 RAL-900_95b 848 chr3R 28173654 28173695 chr3R 28181104 28181130 mdg1 4 7446 0.0 1.5 0.8 2.2 7476 chr3R 28173654 intron CG34354 + chr3R 28177392 intron CG34354 + chr3R 28181130 intron CG34354 + chr3R_4_28175001 chr3R_28175001 RAL-900_95b 849 chr3R 28253350 28253368 chr3R 28255842 28255897 jockey 7 2508 3.0 2.0 2.5 2.0 2547 chr3R 28253350 intergenic not near genes chr3R 28254624 intergenic not near genes chr3R 28255897 intergenic not near genes chr3R_7_28250001 chr3R_28250001 RAL-900_95b 850 chr3R 28302107 28302133 chr3R 28302538 28302562 jockey 8 442 6.0 5.0 5.5 1.2 455 chr3R 28302107 intergenic not near genes chr3R 28302334 intergenic not near genes chr3R 28302562 intergenic not near genes chr3R_8_28300001 chr3R_28300001 RAL-900_95b 851 chr3R 28304647 28304659 chr3R 28304718 28304746 6 79 2.5 1.5 2.0 2.0 99 chr3R 28304647 intergenic CG12516 - chr3R 28304696 intergenic CG12516 - chr3R 28304746 intergenic CG12516 - chr3R_6_28300001 chr3R_28300001 RAL-900_95b 852 chr3R 28327379 28327395 chr3R 28327738 28327759 4 374 3.0 2.5 2.8 1.1 380 chr3R 28327379 intron larp - chr3R 28327569 intron larp - chr3R 28327759 intron larp - chr3R_4_28325001 chr3R_28325001 RAL-900_95b 853 chr3R 28352502 28352538 chr3R 28352857 28352886 4 346 0.5 2.5 1.5 1.6 384 chr3R 28352502 exon Or98b + chr3R 28352694 exon Or98b + chr3R 28352886 exon Or98b + chr3R_4_28350001 chr3R_28350001 RAL-900_95b 854 chr3R 28484354 28484381 chr3R 28486272 28486284 6 1911 61.5 42.0 51.8 0.1 1930 chr3R 28484354 intergenic CG1894 + chr3R 28485319 exon CG1894 + chr3R 28486284 intergenic CG1894 + chr3R_6_28485001 chr3R_28485001 RAL-900_95b 855 chr3R 28599359 28599409 chr3R 28599521 28599554 6 160 3.0 4.5 3.8 1.2 195 chr3R 28599359 intergenic Noa36 - chr3R 28599456 intergenic Noa36 - chr3R 28599554 intergenic Noa36 - chr3R_6_28595001 chr3R_28595001 RAL-900_95b 856 chr3R 21907534 21907536 chr3R 28831801 28831804 12 6924266 13.5 7.0 10.2 1.1 6924270 chr3R 21907534 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831804 intron WASp - chr3R_12_25365001 chr3R_25365001 RAL-900_95b 857 chr3R 29047344 29047361 chr3R 29047443 29047455 5 96 5.0 8.0 6.5 0.7 111 chr3R 29047344 3` UTR Pkc98E + chr3R 29047400 3` UTR Pkc98E + chr3R 29047455 3` UTR Pkc98E + chr3R_5_29045001 chr3R_29045001 RAL-900_95b 858 chr3R 29070037 29070078 chr3R 29070138 29070139 5 93 3.0 2.5 2.8 1.3 102 chr3R 29070037 intron CG11873 + chr3R 29070088 intron CG11873 + chr3R 29070139 intron CG11873 + chr3R_5_29070001 chr3R_29070001 RAL-900_95b 859 chr3R 29182578 29182591 chr3R 29182641 29182679 5 76 0.0 5.5 2.8 1.3 101 chr3R 29182578 intron CG14509 - chr3R 29182628 intron CG14509 - chr3R 29182679 intron CG14509 - chr3R_5_29180001 chr3R_29180001 RAL-900_95b 860 chr3R 29213080 29213088 chr3R 29213145 29213191 4 86 3.5 2.5 3.0 1.0 111 chr3R 29213080 intergenic not near genes chr3R 29213136 intergenic not near genes chr3R 29213191 intergenic not near genes chr3R_4_29210001 chr3R_29210001 RAL-900_95b 861 chr3R 29238770 29238790 chr3R 29238893 29238915 5 127 1.0 8.5 4.8 0.9 145 chr3R 29238770 intergenic CG31427 -,CG11951 - chr3R 29238842 3` UTR CG31427 - chr3R 29238915 3` UTR CG31427 - chr3R_5_29235001 chr3R_29235001 RAL-900_95b 862 chr3R 29240452 29240503 chr3R 29240556 29240607 8 96 1.5 2.5 2.0 2.7 155 chr3R 29240452 intergenic CG31427 -,CG31445 - chr3R 29240530 intergenic CG31445 -,CG31427 - chr3R 29240607 3` UTR CG31445 - chr3R_8_29240001 chr3R_29240001 RAL-900_95b 863 chr3R 29319833 29319852 chr3R 29320140 29320171 jockey 9 320 3.5 2.0 2.8 2.4 338 chr3R 29319833 intergenic Cnx99A - chr3R 29320002 intergenic Cnx99A - chr3R 29320171 intergenic not near genes chr3R_9_29315001 chr3R_29315001 RAL-900_95b 864 chr3R 29356065 29356076 chr3R 29356123 29356128 4 66 4.0 2.0 3.0 1.0 63 chr3R 29356065 intergenic CR45547 - chr3R 29356096 intergenic CR45547 - chr3R 29356128 intergenic CR45547 - chr3R_4_29355001 chr3R_29355001 RAL-900_95b 865 chr3R 29402972 29402993 chr3R 29403081 29403108 4 109 2.0 2.5 2.2 1.2 136 chr3R 29402972 intron Ptp99A + chr3R 29403040 intron Ptp99A + chr3R 29403108 intron Ptp99A + chr3R_4_29400001 chr3R_29400001 RAL-900_95b 866 chr3R 29402995 29403005 chr3R 29403079 29403120 4 94 1.5 2.5 2.0 1.3 125 chr3R 29402995 intron Ptp99A + chr3R 29403058 intron Ptp99A + chr3R 29403120 intron Ptp99A + chr3R_4_29400001 chr3R_29400001 RAL-900_95b 867 chr3R 29505915 29505926 chr3R 29505972 29506011 5 81 2.5 2.5 2.5 1.4 96 chr3R 29505915 intergenic not near genes chr3R 29505963 intergenic not near genes chr3R 29506011 intergenic not near genes chr3R_5_29505001 chr3R_29505001 RAL-900_95b 868 chr3R 29518325 29518333 chr3R 29518387 29518387 4 57 3.5 1.0 2.2 1.2 62 chr3R 29518325 intergenic not near genes chr3R 29518356 intergenic not near genes chr3R 29518387 intergenic not near genes chr3R_4_29515001 chr3R_29515001 RAL-900_95b 869 chr3R 29719400 29719431 chr3R 29719489 29719537 4 102 0.0 2.5 1.2 1.8 137 chr3R 29719400 intron CG15506 + chr3R 29719468 intron CG15506 + chr3R 29719537 intron CG15506 + chr3R_4_29715001 chr3R_29715001 RAL-900_95b 870 chr3R 29738278 29738301 chr3R 29739730 29739748 hobo 7 1451 3.0 2.5 2.8 1.8 1470 chr3R 29738278 5` UTR CG1969 + chr3R 29739013 intron CG1969 + chr3R 29739748 5` UTR CG1969 + chr3R_7_29735001 chr3R_29735001 RAL-900_95b 871 chr3R 29758957 29758971 chr3R 29759015 29759060 8 75 3.5 4.5 4.0 1.6 103 chr3R 29758957 3` UTR CR44953 - chr3R 29759008 3` UTR CR44953 - chr3R 29759060 intergenic CR44953 - chr3R_8_29755001 chr3R_29755001 RAL-900_95b 872 chr3R 29760341 29760392 chr3R 29761562 29761583 pogo 6 1215 3.5 3.5 3.5 1.3 1242 chr3R 29760341 intergenic not near genes chr3R 29760962 intergenic not near genes chr3R 29761583 intergenic not near genes chr3R_6_29760001 chr3R_29760001 RAL-900_95b 873 chr3R 29882014 29882051 chr3R 29891174 29891177 roo 12 9160 3.5 2.5 3.0 3.0 9163 chr3R 29882014 intron CG31038 + chr3R 29886596 intron CG31038 + chr3R 29891177 intron CG31038 + chr3R_12_29885001 chr3R_29885001 RAL-900_95b 874 chr3R 29923616 29923619 chr3R 29925478 29925486 5 1859 19.0 12.5 15.8 0.3 1870 chr3R 29923616 intergenic Jon99Cii -,Jon99Ciii + chr3R 29924551 exon Jon99Cii - chr3R 29925486 exon Jon99Ci - chr3R_5_29920001 chr3R_29920001 RAL-900_95b 875 chr3R 30032173 30032188 chr3R 30032242 30032247 4 68 3.0 4.0 3.5 0.9 74 chr3R 30032173 intron Axn + chr3R 30032210 intron Axn + chr3R 30032247 intron Axn + chr3R_4_30030001 chr3R_30030001 RAL-900_95b 876 chr3R 30112943 30112975 chr3R 30113039 30113063 5 85 2.0 3.5 2.8 1.3 120 chr3R 30112943 intron sima + chr3R 30113003 intron sima + chr3R 30113063 intron sima + chr3R_5_30110001 chr3R_30110001 RAL-900_95b 877 chr3R 30132821 30132853 chr3R 30132929 30132941 6 102 3.0 8.5 5.8 0.9 120 chr3R 30132821 intergenic Tpi -,CG31029 - chr3R 30132881 intergenic Tpi -,CG31029 - chr3R 30132941 intergenic Tpi - chr3R_6_30130001 chr3R_30130001 RAL-900_95b 878 chr3R 30438429 30438465 chr3R 30438511 30438527 5 64 1.5 0.5 1.0 2.5 98 chr3R 30438429 intron CG15537 - chr3R 30438478 intron CG15537 - chr3R 30438527 intron CG15537 - chr3R_5_30435001 chr3R_30435001 RAL-900_95b 879 chr3R 30456389 30456424 chr3R 30456490 30456494 5 84 2.5 4.5 3.5 1.1 105 chr3R 30456389 intergenic CG2224 - chr3R 30456442 3` UTR CG2224 - chr3R 30456494 3` UTR CG2224 - chr3R_5_30455001 chr3R_30455001 RAL-900_95b 880 chr3R 30461482 30461517 chr3R 30461607 30461654 8 126 2.5 2.0 2.2 2.5 172 chr3R 30461482 intron CDase + chr3R 30461568 intron CDase + chr3R 30461654 intron CDase + chr3R_8_30460001 chr3R_30460001 RAL-900_95b 881 chr3R 30485039 30485047 chr3R 30485135 30485143 5 96 4.5 5.0 4.8 0.9 104 chr3R 30485039 intron PH4alphaEFB + chr3R 30485091 intron PH4alphaEFB + chr3R 30485143 intron PH4alphaEFB + chr3R_5_30485001 chr3R_30485001 RAL-900_95b 882 chr3R 30529855 30529904 chr3R 30529968 30529999 6 94 3.0 2.5 2.8 1.6 144 chr3R 30529855 intron CR45552 - chr3R 30529927 intron CR45552 - chr3R 30529999 intron CR45552 - chr3R_6_30525001 chr3R_30525001 RAL-900_95b 883 chr3R 30818817 30818845 chr3R 30820374 30820405 1360 8 1564 2.5 3.0 2.8 2.1 1588 chr3R 30818817 intron cindr + chr3R 30819611 intron cindr + chr3R 30820405 intron cindr + chr3R_8_30815001 chr3R_30815001 RAL-900_95b 884 chr3R 30859418 30859426 chr3R 30859486 30859524 4 84 1.0 1.5 1.2 1.8 106 chr3R 30859418 intergenic not near genes chr3R 30859471 intergenic not near genes chr3R 30859524 intergenic not near genes chr3R_4_30855001 chr3R_30855001 RAL-900_95b 885 chr3R 30956843 30956881 chr3R 30956964 30956968 7 114 3.5 3.0 3.2 1.7 125 chr3R 30956843 intergenic not near genes chr3R 30956906 intergenic not near genes chr3R 30956968 intergenic not near genes chr3R_7_30955001 chr3R_30955001 RAL-900_95b 886 chr3R 31042094 31042143 chr3R 31042201 31042210 10 92 5.0 3.5 4.2 1.9 116 chr3R 31042094 intron CanA1 + chr3R 31042152 intron CanA1 + chr3R 31042210 intron CanA1 + chr3R_10_31040001 chr3R_31040001 RAL-900_95b 887 chr3R 31072975 31072989 chr3R 31073183 31073219 4 218 0.5 1.0 0.8 2.2 244 chr3R 31072975 intron Sox100B + chr3R 31073097 intron Sox100B + chr3R 31073219 exon Sox100B + chr3R_4_31070001 chr3R_31070001 RAL-900_95b 888 chr3R 31137142 31137175 chr3R 31137242 31137259 4 96 3.5 4.0 3.8 0.8 117 chr3R 31137142 intron Gycbeta100B + chr3R 31137200 intron Gycbeta100B + chr3R 31137259 intron Gycbeta100B + chr3R_4_31135001 chr3R_31135001 RAL-900_95b 889 chr3R 31137181 31137184 chr3R 31137234 31137253 4 79 3.0 4.0 3.5 0.9 72 chr3R 31137181 intron Gycbeta100B + chr3R 31137217 intron Gycbeta100B + chr3R 31137253 intron Gycbeta100B + chr3R_4_31135001 chr3R_31135001 RAL-900_95b 890 chr3R 31435367 31435388 chr3R 31435513 31435555 5 158 3.0 4.5 3.8 1.0 188 chr3R 31435367 intron Gprk2 + chr3R 31435461 intron Gprk2 + chr3R 31435555 intron Gprk2 + chr3R_5_31435001 chr3R_31435001 RAL-900_95b 891 chr3R 31537271 31537303 chr3R 31537403 31537435 4 132 2.0 3.5 2.8 1.1 164 chr3R 31537271 intergenic not near genes chr3R 31537353 intergenic not near genes chr3R 31537435 intergenic not near genes chr3R_4_31535001 chr3R_31535001 RAL-900_95b 892 chr3R 31946036 31946055 chr3R 31946109 31946124 7 72 1.0 2.5 1.8 2.5 88 chr3R 31946036 intron heph - chr3R 31946080 intron heph - chr3R 31946124 intron heph - chr3R_7_31945001 chr3R_31945001 RAL-900_95b 893 chr3R 31997990 31998022 chr3R 32005460 32005492 blood 10 7461 1.5 0.5 1.0 5.0 7502 chr3R 31997990 intron heph - chr3R 32001741 intron heph - chr3R 32005492 intron heph - chr3R_10_32000001 chr3R_32000001 RAL-900_95b 894 chr4 76503 76529 chr4 81929 81954 I-element 4 5424 2.5 1.0 1.8 1.4 5451 chr4 76503 intron pan + chr4 79228 intron pan + chr4 81954 intron pan + chr4_4_75001 chr4_75001 RAL-900_95b 895 chr4 264973 265007 chr4 265178 265193 6 210 1.5 2.5 2.0 2.0 220 chr4 264973 3` UTR RhoGAP102A + chr4 265083 3` UTR RhoGAP102A + chr4 265193 3` UTR RhoGAP102A + chr4_6_265001 chr4_265001 RAL-900_95b 896 chr4 319974 319985 chr4 328170 328181 Stalker2 4 8196 7.0 4.0 5.5 0.6 8207 chr4 319974 3` UTR CG32850 + chr4 324078 intron CG32850 + chr4 328181 3` UTR CG32850 + chr4_4_320001 chr4_320001 RAL-900_95b 897 chr4 319988 320008 chr4 328165 328181 Stalker2 7 8189 6.0 3.5 4.8 1.2 8193 chr4 319988 3` UTR CG32850 + chr4 324084 intron CG32850 + chr4 328181 3` UTR CG32850 + chr4_7_320001 chr4_320001 RAL-900_95b 898 chr4 336253 336281 chr4 336415 336468 6 160 3.5 1.0 2.2 1.9 215 chr4 336253 intron PMCA - chr4 336360 intron PMCA - chr4 336468 intron PMCA - chr4_6_335001 chr4_335001 RAL-900_95b 899 chr4 852917 852930 chr4 853260 853287 6 357 5.5 3.0 4.2 1.2 370 chr4 852917 intergenic not near genes chr4 853102 intergenic not near genes chr4 853287 intergenic CG11148 - chr4_6_850001 chr4_850001 RAL-900_95b 900 chrX 388248 388261 chrX 390575 390625 4 2336 8.5 12.5 10.5 0.3 2377 chrX 388248 intron CG32816 - chrX 389436 intron CG32816 - chrX 390625 intron CG32816 - chrX_4_385001 chrX_385001 RAL-900_95b 901 chrX 428428 428451 chrX 434612 434656 3S18 7 6198 3.5 3.0 3.2 1.7 6228 chrX 428428 intron CG32816 - chrX 431542 intron CG32816 - chrX 434656 intron CG32816 - chrX_7_430001 chrX_430001 RAL-900_95b 902 chrX 494603 494633 chrX 494695 494699 6 83 1.5 1.5 1.5 2.4 96 chrX 494603 intergenic CG17778 + chrX 494651 5` UTR CG17778 + chrX 494699 5` UTR CG17778 + chrX_6_490001 chrX_490001 RAL-900_95b 903 chrX 827621 827628 chrX 835398 835400 roo 4 7784 3.0 3.0 3.0 1.0 7779 chrX 827621 intron CG43867 - chrX 831510 intron CG43867 - chrX 835400 intron CG43867 - chrX_4_830001 chrX_830001 RAL-900_95b 904 chrX 1559915 1559942 chrX 1560003 1560022 5 82 3.0 0.5 1.8 1.8 107 chrX 1559915 intron Mur2B - chrX 1559968 intron Mur2B - chrX 1560022 intron Mur2B - chrX_5_1555001 chrX_1555001 RAL-900_95b 905 chrX 1930518 1930564 chrX 1938108 1938125 opus 5 7575 2.0 1.5 1.8 1.8 7607 chrX 1930518 intergenic CG11596 + chrX 1934322 intergenic not near genes chrX 1938125 3` UTR CG3857 - chrX_5_1930001 chrX_1930001 RAL-900_95b 906 chrX 2394274 2394300 chrX 2394357 2394387 6 87 2.5 1.0 1.8 2.1 113 chrX 2394274 intergenic not near genes chrX 2394330 intergenic not near genes chrX 2394387 intergenic not near genes chrX_6_2390001 chrX_2390001 RAL-900_95b 907 chrX 2578802 2578842 chrX 2578909 2578913 8 89 2.0 7.0 4.5 1.5 111 chrX 2578802 intergenic Pdfr +,Vha36-3 - chrX 2578858 intergenic Pdfr +,Vha36-3 - chrX 2578913 intergenic Vha36-3 -,Pdfr + chrX_8_2575001 chrX_2575001 RAL-900_95b 908 chrX 2844895 2844916 chrX 2852325 2852346 mdg1 4 7427 2.5 1.0 1.8 1.4 7451 chrX 2844895 intron kirre + chrX 2848620 intron kirre + chrX 2852346 intron kirre + chrX_4_2845001 chrX_2845001 RAL-900_95b 909 chrX 3218487 3218539 chrX 3227656 3227708 roo 5 9160 1.0 1.5 1.2 2.3 9221 chrX 3218487 intron dnc + chrX 3223098 intron dnc + chrX 3227708 intron dnc + chrX_5_3220001 chrX_3220001 RAL-900_95b 910 chrX 3306344 3306374 chrX 3306425 3306445 6 71 2.0 0.5 1.2 2.7 101 chrX 3306344 intron dnc + chrX 3306394 intron dnc + chrX 3306445 intron dnc + chrX_6_3305001 chrX_3305001 RAL-900_95b 911 chrX 3408992 3409011 chrX 3409077 3409098 4 87 0.5 4.0 2.2 1.2 106 chrX 3408992 intron,intron CR44999 +,CG12535 - chrX 3409045 intron,intron CR44999 +,CG12535 - chrX 3409098 intron,intron CR44999 +,CG12535 - chrX_4_3405001 chrX_3405001 RAL-900_95b 912 chrX 3597540 3597574 chrX 3619728 3619744 roo 4 22182 6.5 4.0 5.2 0.6 22204 chrX 3597540 intron AstA-R1 + chrX 3608642 intron AstA-R1 + chrX 3619744 intron AstA-R1 + chrX_4_3605001 chrX_3605001 RAL-900_95b 913 chrX 3866117 3866127 chrX 3866185 3866190 4 78 4.0 1.0 2.5 1.1 73 chrX 3866117 intron yin - chrX 3866154 intron yin - chrX 3866190 intron yin - chrX_4_3865001 chrX_3865001 RAL-900_95b 914 chrX 3930026 3930071 chrX 3930123 3930132 8 89 3.0 3.0 3.0 2.0 106 chrX 3930026 5` UTR CG42541 - chrX 3930079 5` UTR CG42541 - chrX 3930132 5` UTR CG42541 - chrX_8_3930001 chrX_3930001 RAL-900_95b 915 chrX 3986880 3986893 chrX 3994516 3994546 412 4 7643 4.5 4.5 4.5 0.7 7666 chrX 3986880 intergenic not near genes chrX 3990713 intergenic not near genes chrX 3994546 intergenic not near genes chrX_4_3990001 chrX_3990001 RAL-900_95b 916 chrX 4048517 4048520 chrX 4048578 4048616 4 84 2.0 4.0 3.0 1.0 99 chrX 4048517 3` UTR CR45482 - chrX 4048566 3` UTR CR45482 - chrX 4048616 3` UTR CR45482 - chrX_4_4045001 chrX_4045001 RAL-900_95b 917 chrX 4324371 4324414 chrX 4324468 4324511 4 90 0.5 1.0 0.8 2.2 140 chrX 4324371 intron norpA + chrX 4324441 intron norpA + chrX 4324511 intron norpA + chrX_4_4320001 chrX_4320001 RAL-900_95b 918 chrX 4660802 4660847 chrX 4660921 4660931 8 112 4.5 0.0 2.2 2.5 129 chrX 4660802 intron CG3009 - chrX 4660866 intron CG3009 - chrX 4660931 intron CG3009 - chrX_8_4660001 chrX_4660001 RAL-900_95b 919 chrX 4700410 4700424 chrX 4700733 4700768 jockey 4 348 1.5 1.0 1.2 1.8 358 chrX 4700410 3` UTR ctp + chrX 4700589 3` UTR ctp + chrX 4700768 3` UTR ctp + chrX_4_4700001 chrX_4700001 RAL-900_95b 920 chrX 4731825 4731836 chrX 4736903 4736912 jockey 4 5080 3.0 2.0 2.5 1.1 5087 chrX 4731825 intergenic not near genes chrX 4734368 intergenic not near genes chrX 4736912 intergenic not near genes chrX_4_4730001 chrX_4730001 RAL-900_95b 921 chrX 4763276 4763285 chrX 4763748 4763773 Stalker4 6 493 0.5 2.5 1.5 2.4 497 chrX 4763276 intergenic not near genes chrX 4763524 intergenic not near genes chrX 4763773 intergenic not near genes chrX_6_4760001 chrX_4760001 RAL-900_95b 922 chrX 4931336 4931357 chrX 4931450 4931453 5 109 12.0 11.5 11.8 0.4 117 chrX 4931336 intron CG44774 - chrX 4931394 intron CG44774 - chrX 4931453 intron CG44774 - chrX_5_4930001 chrX_4930001 RAL-900_95b 923 chrX 4931360 4931376 chrX 4931439 4931447 5 84 8.0 8.0 8.0 0.6 87 chrX 4931360 intron CG44774 - chrX 4931404 intron CG44774 - chrX 4931447 intron CG44774 - chrX_5_4930001 chrX_4930001 RAL-900_95b 924 chrX 5473572 5473615 chrX 5473668 5473683 5 81 2.5 3.0 2.8 1.3 111 chrX 5473572 intron SPR + chrX 5473628 intron SPR + chrX 5473683 intron SPR + chrX_5_5470001 chrX_5470001 RAL-900_95b 925 chrX 5524853 5524869 chrX 5528704 5528737 412 4 3858 2.5 3.0 2.8 1.1 3884 chrX 5524853 intergenic snoRNA:Psi28S-3342 - chrX 5526795 intergenic not near genes chrX 5528737 intergenic Vsx2 - chrX_4_5525001 chrX_5525001 RAL-900_95b 926 chrX 6003301 6003309 chrX 6003372 6003410 4 83 1.0 2.5 1.8 1.4 109 chrX 6003301 intron CR44498 + chrX 6003356 intron CR44498 + chrX 6003410 intron CR44498 + chrX_4_6000001 chrX_6000001 RAL-900_95b 927 chrX 6171593 6171598 chrX 6179016 6179037 Quasimodo 4 7430 5.0 5.5 5.2 0.6 7444 chrX 6171593 intron Ca-alpha1T - chrX 6175315 intron Ca-alpha1T - chrX 6179037 intron Ca-alpha1T - chrX_4_6175001 chrX_6175001 RAL-900_95b 928 chrX 6219452 6219469 chrX 6219519 6219525 5 68 2.0 3.0 2.5 1.4 73 chrX 6219452 intergenic Btd - chrX 6219488 intergenic Btd -,Efr + chrX 6219525 intergenic Btd -,Efr + chrX_5_6215001 chrX_6215001 RAL-900_95b 929 chrX 6328501 6328506 chrX 6328584 6328600 5 88 2.0 4.0 3.0 1.2 99 chrX 6328501 3` UTR CG15894 + chrX 6328550 3` UTR CG15894 + chrX 6328600 3` UTR CG15894 + chrX_5_6325001 chrX_6325001 RAL-900_95b 930 chrX 6388664 6388688 chrX 6388744 6388744 8 87 2.5 0.5 1.5 3.2 80 chrX 6388664 intergenic not near genes chrX 6388704 intergenic not near genes chrX 6388744 intergenic not near genes chrX_8_6385001 chrX_6385001 RAL-900_95b 931 chrX 6402126 6402135 chrX 6402188 6402230 7 80 2.5 2.5 2.5 2.0 104 chrX 6402126 intergenic not near genes chrX 6402178 intergenic not near genes chrX 6402230 intergenic not near genes chrX_7_6400001 chrX_6400001 RAL-900_95b 932 chrX 6539935 6539949 chrX 6540019 6540040 6 90 2.5 2.5 2.5 1.7 105 chrX 6539935 intergenic not near genes chrX 6539988 intergenic not near genes chrX 6540040 intergenic not near genes chrX_6_6535001 chrX_6535001 RAL-900_95b 933 chrX 6605476 6605496 chrX 6608518 6608538 Burdock 4 3038 3.5 3.0 3.2 1.0 3062 chrX 6605476 intron pigs + chrX 6607007 intron pigs + chrX 6608538 intron pigs + chrX_4_6605001 chrX_6605001 RAL-900_95b 934 chrX 6856713 6856757 chrX 6856830 6856833 5 107 3.0 1.5 2.2 1.6 120 chrX 6856713 intron CG14434 - chrX 6856773 intron CG14434 - chrX 6856833 intron CG14434 - chrX_5_6855001 chrX_6855001 RAL-900_95b 935 chrX 6897580 6897709 chrX 6897656 6897825 5 106 2.0 2.0 2.0 1.7 245 chrX 6897580 intergenic not near genes chrX 6897702 intergenic not near genes chrX 6897825 intergenic not near genes chrX_5_6895001 chrX_6895001 RAL-900_95b 936 chrX 7023616 7023629 chrX 7030990 7031016 Tabor 5 7382 5.0 1.0 3.0 1.2 7400 chrX 7023616 intron CG12541 - chrX 7027316 intron CG12541 - chrX 7031016 intron CG12541 - chrX_5_7025001 chrX_7025001 RAL-900_95b 937 chrX 7702919 7702933 chrX 7703335 7703347 jockey 5 426 3.5 4.0 3.8 1.0 428 chrX 7702919 intron CHES-1-like - chrX 7703133 intron CHES-1-like - chrX 7703347 intron CHES-1-like - chrX_5_7700001 chrX_7700001 RAL-900_95b 938 chrX 7737111 7737140 chrX 7737243 7737262 4 130 2.0 2.5 2.2 1.2 151 chrX 7737111 5` UTR Tom40 + chrX 7737186 intron Tom40 + chrX 7737262 intron Tom40 + chrX_4_7735001 chrX_7735001 RAL-900_95b 939 chrX 7960882 7960902 chrX 7960971 7961011 5 98 2.0 1.0 1.5 2.0 129 chrX 7960882 intron,5` UTR sws -,CR45620 + chrX 7960946 intron sws - chrX 7961011 intron sws - chrX_5_7960001 chrX_7960001 RAL-900_95b 940 chrX 8085589 8085602 chrX 8085660 8085707 6 84 3.5 4.5 4.0 1.2 118 chrX 8085589 intron,5` UTR CG2256 -,CR45535 + chrX 8085648 intron,5` UTR CG2256 -,CR45535 + chrX 8085707 intron,5` UTR CG2256 -,CR45535 + chrX_6_8085001 chrX_8085001 RAL-900_95b 941 chrX 8500920 8500956 chrX 8501094 8501115 6 167 3.5 0.0 1.8 2.1 195 chrX 8500920 intron CG33181 + chrX 8501018 intron CG33181 + chrX 8501115 intron CG33181 + chrX_6_8500001 chrX_8500001 RAL-900_95b 942 chrX 8513098 8513116 chrX 8513369 8513394 4 280 3.5 3.5 3.5 0.9 296 chrX 8513098 intron CG33181 + chrX 8513246 intron CG33181 + chrX 8513394 intron CG33181 + chrX_4_8510001 chrX_8510001 RAL-900_95b 943 chrX 8536742 8536773 chrX 8536838 8536869 5 96 5.0 4.0 4.5 0.9 127 chrX 8536742 intron Nrg + chrX 8536806 intron Nrg + chrX 8536869 intron Nrg + chrX_5_8535001 chrX_8535001 RAL-900_95b 944 chrX 8927584 8927610 chrX 8929854 8929860 NOF 5 2256 2.0 3.5 2.8 1.3 2276 chrX 8927584 intron rdgA + chrX 8928722 intron rdgA + chrX 8929860 intron rdgA + chrX_5_8925001 chrX_8925001 RAL-900_95b 945 chrX 8948759 8948786 chrX 8956276 8956316 roo 5 7523 1.0 2.0 1.5 2.0 7557 chrX 8948759 intron rdgA + chrX 8952538 intron rdgA + chrX 8956316 intron rdgA + chrX_5_8950001 chrX_8950001 RAL-900_95b 946 chrX 9337928 9337961 chrX 9338032 9338044 4 97 0.5 0.5 0.5 2.7 116 chrX 9337928 intron CG34449 - chrX 9337986 intron CG34449 - chrX 9338044 intron CG34449 - chrX_4_9335001 chrX_9335001 RAL-900_95b 947 chrX 9999009 9999049 chrX 9999103 9999108 4 88 1.5 2.0 1.8 1.4 99 chrX 9999009 intron CG32694 + chrX 9999058 intron CG32694 + chrX 9999108 intron CG32694 + chrX_4_9995001 chrX_9995001 RAL-900_95b 948 chrX 10138225 10138243 chrX 10145724 10145747 412 4 7501 3.0 3.0 3.0 1.0 7522 chrX 10138225 intron,intron RhoU +,CR44894 - chrX 10141986 intron,intron RhoU +,CR44894 - chrX 10145747 intron,intron RhoU +,CR44894 - chrX_4_10140001 chrX_10140001 RAL-900_95b 949 chrX 10295270 10295281 chrX 10295653 10295671 6 400 4.0 2.0 3.0 1.5 401 chrX 10295270 intron alpha-Man-I - chrX 10295470 intron alpha-Man-I - chrX 10295671 intron alpha-Man-I - chrX_6_10295001 chrX_10295001 RAL-900_95b 950 chrX 10317539 10317581 chrX 10317636 10317679 7 93 2.5 1.5 2.0 2.3 140 chrX 10317539 intron alpha-Man-I - chrX 10317609 intron alpha-Man-I - chrX 10317679 intron alpha-Man-I - chrX_7_10315001 chrX_10315001 RAL-900_95b 951 chrX 10446685 10446708 chrX 10446787 10446790 4 96 1.0 5.5 3.2 1.0 105 chrX 10446685 intron CG32683 - chrX 10446738 intron CG32683 - chrX 10446790 intron CG32683 - chrX_4_10445001 chrX_10445001 RAL-900_95b 952 chrX 10453054 10453094 chrX 10453265 10453265 7 200 1.0 2.5 1.8 2.5 211 chrX 10453054 intron CG32683 - chrX 10453160 intron CG32683 - chrX 10453265 intron CG32683 - chrX_7_10450001 chrX_10450001 RAL-900_95b 953 chrX 10651610 10651646 chrX 10651746 10651753 4 122 0.5 3.0 1.8 1.4 143 chrX 10651610 intron X11Lbeta + chrX 10651682 intron X11Lbeta + chrX 10651753 intron X11Lbeta + chrX_4_10650001 chrX_10650001 RAL-900_95b 954 chrX 11109417 11109417 chrX 12946233 12946234 6 1836817 11.5 14.5 13.0 0.4 1836817 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946234 3` UTR fne + chrX_6_12025001 chrX_12025001 RAL-900_95b 955 chrX 11379777 11379792 chrX 11379911 11379927 6 140 2.5 4.0 3.2 1.4 150 chrX 11379777 intron dlg1 + chrX 11379852 intron dlg1 + chrX 11379927 intron dlg1 + chrX_6_11375001 chrX_11375001 RAL-900_95b 956 chrX 11431609 11431628 chrX 11431681 11431695 4 77 0.0 4.0 2.0 1.3 86 chrX 11431609 3` UTR Evi5 - chrX 11431652 3` UTR Evi5 - chrX 11431695 3` UTR Evi5 - chrX_4_11430001 chrX_11430001 RAL-900_95b 957 chrX 11633414 11633442 chrX 11640472 11640506 297 4 7059 3.5 2.0 2.8 1.1 7092 chrX 11633414 intron Ptp10D + chrX 11636960 intron Ptp10D + chrX 11640506 intron Ptp10D + chrX_4_11635001 chrX_11635001 RAL-900_95b 958 chrX 11922351 11922370 chrX 11922504 11922523 5 149 3.5 5.0 4.2 1.0 172 chrX 11922351 exon Sclp - chrX 11922437 intron Sclp - chrX 11922523 intron Sclp - chrX_5_11920001 chrX_11920001 RAL-900_95b 959 chrX 12094036 12094067 chrX 12094128 12094167 4 92 2.0 2.0 2.0 1.3 131 chrX 12094036 intron,intron CR43960 +,Ten-a + chrX 12094102 intron,intron CR43960 +,Ten-a + chrX 12094167 intron,intron CR43960 +,Ten-a + chrX_4_12090001 chrX_12090001 RAL-900_95b 960 chrX 12917898 12917916 chrX 12917981 12918029 6 91 2.5 3.5 3.0 1.5 131 chrX 12917898 intron fne + chrX 12917964 intron fne + chrX 12918029 intron fne + chrX_6_12915001 chrX_12915001 RAL-900_95b 961 chrX 12960746 12960790 chrX 12960847 12960858 5 83 3.5 0.5 2.0 1.7 112 chrX 12960746 3` UTR CG32642 + chrX 12960802 intergenic CG32642 + chrX 12960858 intergenic CG32642 + chrX_5_12960001 chrX_12960001 RAL-900_95b 962 chrX 12977048 12977061 chrX 12977144 12977157 5 96 1.5 2.5 2.0 1.7 109 chrX 12977048 intergenic not near genes chrX 12977102 intergenic not near genes chrX 12977157 intergenic not near genes chrX_5_12975001 chrX_12975001 RAL-900_95b 963 chrX 13146575 13146627 chrX 13146683 13146698 10 90 3.5 2.5 3.0 2.5 123 chrX 13146575 intron CG32645 + chrX 13146636 intron CG32645 + chrX 13146698 intron CG32645 + chrX_10_13145001 chrX_13145001 RAL-900_95b 964 chrX 13161690 13161722 chrX 13161769 13161819 6 84 3.0 2.5 2.8 1.6 129 chrX 13161690 3` UTR CG12096 + chrX 13161754 3` UTR,3` UTR CG12096 +,CG34411 - chrX 13161819 3` UTR,3` UTR CG12096 +,CG34411 - chrX_6_13160001 chrX_13160001 RAL-900_95b 965 chrX 13172347 13172381 chrX 13172426 13172434 6 78 1.5 3.0 2.2 1.9 87 chrX 13172347 exon CG34411 - chrX 13172390 intron CG34411 - chrX 13172434 intron CG34411 - chrX_6_13170001 chrX_13170001 RAL-900_95b 966 chrX 13269196 13269236 chrX 13269280 13269297 6 74 0.0 1.0 0.5 4.0 101 chrX 13269196 intron HDAC4 - chrX 13269246 intron HDAC4 - chrX 13269297 intron HDAC4 - chrX_6_13265001 chrX_13265001 RAL-900_95b 967 chrX 13463665 13463678 chrX 13469221 13469222 mdg3 4 5556 1.0 4.5 2.8 1.1 5557 chrX 13463665 intron Neto + chrX 13466444 intron Neto + chrX 13469222 intron Neto + chrX_4_13465001 chrX_13465001 RAL-900_95b 968 chrX 13057303 13057304 chrX 13966949 13966949 5 909645 11.5 4.0 7.8 0.6 909646 chrX 13057303 intron rad + chrX 13512126 intron Neto + chrX 13966949 intron mamo - chrX_5_13510001 chrX_13510001 RAL-900_95b 969 chrX 14201127 14201147 chrX 14201200 14201248 5 81 2.5 1.5 2.0 1.7 121 chrX 14201127 intergenic CG11590 +,l(1)G0007 + chrX 14201188 intergenic l(1)G0007 +,CG11590 + chrX 14201248 intergenic l(1)G0007 +,CG11590 + chrX_5_14200001 chrX_14200001 RAL-900_95b 970 chrX 14636466 14636494 chrX 14641905 14641924 I-element 5 5436 2.5 1.0 1.8 1.8 5458 chrX 14636466 intron NetA - chrX 14639195 intron NetA - chrX 14641924 intron NetA - chrX_5_14635001 chrX_14635001 RAL-900_95b 971 chrX 14778037 14778059 chrX 14782829 14782866 Doc 4 4800 4.0 3.0 3.5 0.9 4829 chrX 14778037 intergenic CG5347 + chrX 14780452 intergenic not near genes chrX 14782866 intergenic Ag5r2 - chrX_4_14780001 chrX_14780001 RAL-900_95b 972 chrX 14813720 14813761 chrX 14813813 14813824 4 83 2.5 0.5 1.5 1.6 104 chrX 14813720 intron rut - chrX 14813772 intron rut - chrX 14813824 intron rut - chrX_4_14810001 chrX_14810001 RAL-900_95b 973 chrX 14936840 14936891 chrX 14946117 14946163 roo 6 9269 2.5 3.5 3.0 1.5 9323 chrX 14936840 intron pdgy - chrX 14941502 intron pdgy - chrX 14946163 intron pdgy - chrX_6_14940001 chrX_14940001 RAL-900_95b 974 chrX 14952420 14952451 chrX 14952607 14952617 4 182 3.0 4.5 3.8 0.8 197 chrX 14952420 intron,3` UTR pdgy -,CR44831 - chrX 14952518 intron,3` UTR pdgy -,CR44831 - chrX 14952617 intron,3` UTR pdgy -,CR44831 - chrX_4_14950001 chrX_14950001 RAL-900_95b 975 chrX 14952456 14952464 chrX 14952603 14952618 4 146 2.5 4.5 3.5 0.9 162 chrX 14952456 intron,3` UTR pdgy -,CR44831 - chrX 14952537 intron,3` UTR pdgy -,CR44831 - chrX 14952618 intron,3` UTR pdgy -,CR44831 - chrX_4_14950001 chrX_14950001 RAL-900_95b 976 chrX 15413063 15413079 chrX 15417357 15417370 Juan 4 4298 3.0 1.0 2.0 1.3 4307 chrX 15413063 intron Cngl - chrX 15415216 intron Cngl - chrX 15417370 intron Cngl - chrX_4_15415001 chrX_15415001 RAL-900_95b 977 chrX 15421903 15421932 chrX 15423434 15423463 pogo 4 1530 4.5 2.0 3.2 1.0 1560 chrX 15421903 intron Cngl - chrX 15422683 intron Cngl - chrX 15423463 intron Cngl - chrX_4_15420001 chrX_15420001 RAL-900_95b 978 chrX 16222792 16222810 chrX 16231126 16231136 roo 6 8338 1.0 2.0 1.5 2.4 8344 chrX 16222792 intergenic not near genes chrX 16226964 intergenic not near genes chrX 16231136 intergenic not near genes chrX_6_16225001 chrX_16225001 RAL-900_95b 979 chrX 16340671 16340697 chrX 16349823 16349874 roo 6 9161 2.5 4.0 3.2 1.4 9203 chrX 16340671 intergenic Dsp1 + chrX 16345272 intergenic not near genes chrX 16349874 intergenic sl + chrX_6_16345001 chrX_16345001 RAL-900_95b 980 chrX 16492626 16492674 chrX 16498223 16498270 mdg3 10 5586 3.5 2.0 2.8 2.6 5644 chrX 16492626 intron para - chrX 16495448 intron para - chrX 16498270 exon para - chrX_10_16495001 chrX_16495001 RAL-900_95b 981 chrX 1053119 1053123 chrX 16983076 16983076 4 15929955 3.0 10.5 6.8 0.5 15929957 chrX 1053119 intron CR44779 + chrX 9018098 intron,intron rdgA +,CR43836 - chrX 16983076 intron CG45002 - chrX_4_9015001 chrX_9015001 RAL-900_95b 982 chrX 1053120 1053123 chrX 16983077 16983077 5 15929955 3.0 10.5 6.8 0.6 15929957 chrX 1053120 intron CR44779 + chrX 9018098 intron,intron rdgA +,CR43836 - chrX 16983077 intron CG45002 - chrX_5_9015001 chrX_9015001 RAL-900_95b 983 chrX 17061583 17061599 chrX 17061690 17061721 5 112 1.5 1.0 1.2 2.3 138 chrX 17061583 intron CG45002 - chrX 17061652 intron CG45002 - chrX 17061721 intron CG45002 - chrX_5_17060001 chrX_17060001 RAL-900_95b 984 chrX 17195206 17195228 chrX 17200291 17200309 flea 6 5090 5.0 3.0 4.0 1.2 5103 chrX 17195206 3` UTR baz + chrX 17197758 3` UTR baz + chrX 17200309 3` UTR baz + chrX_6_17195001 chrX_17195001 RAL-900_95b 985 chrX 17316373 17316396 chrX 17316460 17316480 5 92 1.0 0.5 0.8 2.8 107 chrX 17316373 intron B-H2 + chrX 17316426 intron B-H2 + chrX 17316480 intron B-H2 + chrX_5_17315001 chrX_17315001 RAL-900_95b 986 chrX 17708821 17708858 chrX 17708917 17708953 5 96 1.0 4.0 2.5 1.4 132 chrX 17708821 intron CG8173 - chrX 17708887 intron CG8173 - chrX 17708953 intron CG8173 - chrX_5_17705001 chrX_17705001 RAL-900_95b 987 chrX 17784463 17784484 chrX 17784559 17784574 5 93 2.0 2.5 2.2 1.6 111 chrX 17784463 intergenic not near genes chrX 17784518 intergenic not near genes chrX 17784574 intergenic not near genes chrX_5_17780001 chrX_17780001 RAL-900_95b 988 chrX 17911838 17911868 chrX 17911939 17911965 4 96 2.0 2.0 2.0 1.3 127 chrX 17911838 intron CG6847 + chrX 17911902 intron CG6847 + chrX 17911965 intron CG6847 + chrX_4_17910001 chrX_17910001 RAL-900_95b 989 chrX 17968907 17968931 chrX 17969010 17969049 6 121 3.0 2.5 2.8 1.6 142 chrX 17968907 intron Sh - chrX 17968978 intron Sh - chrX 17969049 intron Sh - chrX_6_17965001 chrX_17965001 RAL-900_95b 990 chrX 18126584 18126828 chrX 18126727 18126925 11 127 1.5 0.5 1.0 5.5 341 chrX 18126584 intron CG32553 - chrX 18126754 intron CG32553 - chrX 18126925 intron CG32553 - chrX_11_18125001 chrX_18125001 RAL-900_95b 991 chrX 18429483 18429521 chrX 18434803 18434852 Transpac 8 5316 6.0 2.5 4.2 1.5 5369 chrX 18429483 intergenic not near genes chrX 18432168 intergenic not near genes chrX 18434852 intergenic not near genes chrX_8_18430001 chrX_18430001 RAL-900_95b 992 chrX 18910953 18910977 chrX 18911050 18911084 4 98 2.5 5.0 3.8 0.8 131 chrX 18910953 3` UTR CG7378 + chrX 18911018 3` UTR CG7378 + chrX 18911084 3` UTR CG7378 + chrX_4_18910001 chrX_18910001 RAL-900_95b 993 chrX 18957064 18957092 chrX 18965745 18965772 roo 4 8674 1.5 4.0 2.8 1.1 8708 chrX 18957064 intron CG43759 + chrX 18961418 intron CG43759 + chrX 18965772 intron CG43759 + chrX_4_18960001 chrX_18960001 RAL-900_95b 994 chrX 19025271 19025293 chrX 19025376 19025378 6 100 2.5 4.5 3.5 1.3 107 chrX 19025271 intron CG43759 + chrX 19025324 intron CG43759 + chrX 19025378 intron CG43759 + chrX_6_19025001 chrX_19025001 RAL-900_95b 995 chrX 19025299 19025314 chrX 19025374 19025375 4 74 2.0 4.0 3.0 1.0 76 chrX 19025299 intron CG43759 + chrX 19025337 intron CG43759 + chrX 19025375 intron CG43759 + chrX_4_19025001 chrX_19025001 RAL-900_95b 996 chrX 19060416 19060439 chrX 19065190 19065243 Doc 10 4788 3.5 2.5 3.0 2.5 4827 chrX 19060416 intron CG14190 + chrX 19062830 intron CG14190 + chrX 19065243 intron CG14190 + chrX_10_19060001 chrX_19060001 RAL-900_95b 997 chrX 19136558 19136584 chrX 19143479 19143503 412 4 6930 2.0 1.0 1.5 1.6 6945 chrX 19136558 intergenic not near genes chrX 19140030 intergenic not near genes chrX 19143503 3` UTR RhoGAP18B - chrX_4_19140001 chrX_19140001 RAL-900_95b 998 chrX 19176229 19176240 chrX 19176292 19176299 4 65 3.0 0.5 1.8 1.4 70 chrX 19176229 3` UTR CG7556 - chrX 19176264 3` UTR CG7556 - chrX 19176299 3` UTR CG7556 - chrX_4_19175001 chrX_19175001 RAL-900_95b 999 chrX 19185513 19185563 chrX 19185629 19185679 5 103 0.0 1.0 0.5 3.3 166 chrX 19185513 intron CG33253 + chrX 19185596 intron CG33253 + chrX 19185679 intron CG33253 + chrX_5_19185001 chrX_19185001 RAL-900_95b 1000 chrX 19280996 19281029 chrX 19281136 19281138 7 130 0.0 3.0 1.5 2.8 142 chrX 19280996 intergenic CG8034 - chrX 19281067 intergenic CG8034 - chrX 19281138 intergenic CG8034 - chrX_7_19280001 chrX_19280001 RAL-900_95b 1001 chrX 19689387 19689435 chrX 19689483 19689492 8 83 2.0 3.5 2.8 2.1 105 chrX 19689387 intergenic Mer -,CG14227 - chrX 19689440 intergenic Mer -,CG14227 - chrX 19689492 intergenic Mer - chrX_8_19685001 chrX_19685001 RAL-900_95b 1002 chrX 19762584 19762620 chrX 19762664 19762689 5 74 2.0 2.0 2.0 1.7 105 chrX 19762584 5` UTR CG12702 - chrX 19762636 5` UTR CG12702 - chrX 19762689 5` UTR CG12702 - chrX_5_19760001 chrX_19760001 RAL-900_95b 1003 chrX 19881436 19881483 chrX 19881536 19881544 9 81 3.5 2.0 2.8 2.4 108 chrX 19881436 intron Hers + chrX 19881490 intron Hers + chrX 19881544 intron Hers + chrX_9_19880001 chrX_19880001 RAL-900_95b 1004 chrX 19983854 19983882 chrX 19983950 19983982 4 92 1.0 2.0 1.5 1.6 128 chrX 19983854 intergenic not near genes chrX 19983918 intergenic not near genes chrX 19983982 intergenic not near genes chrX_4_19980001 chrX_19980001 RAL-900_95b 1005 chrX 20124069 20124105 chrX 20124228 20124233 5 148 0.5 2.0 1.2 2.3 164 chrX 20124069 intron CG34331 + chrX 20124151 intron CG34331 + chrX 20124233 intron CG34331 + chrX_5_20120001 chrX_20120001 RAL-900_95b 1006 chrX 20369315 20369341 chrX 20369403 20369409 9 87 1.0 3.0 2.0 3.0 94 chrX 20369315 intergenic not near genes chrX 20369362 intergenic not near genes chrX 20369409 intergenic not near genes chrX_9_20365001 chrX_20365001 RAL-900_95b 1007 chrX 20443189 20443199 chrX 20443245 20443295 4 69 1.0 1.0 1.0 2.0 106 chrX 20443189 intron CG1695 + chrX 20443242 intron CG1695 + chrX 20443295 intron CG1695 + chrX_4_20440001 chrX_20440001 RAL-900_95b 1008 chrX 20526669 20526701 chrX 20526767 20526794 4 99 3.0 2.5 2.8 1.1 125 chrX 20526669 intergenic not near genes chrX 20526732 intergenic not near genes chrX 20526794 intergenic not near genes chrX_4_20525001 chrX_20525001 RAL-900_95b 1009 chrX 20527498 20527515 chrX 20574195 20574205 4 46694 3.0 9.0 6.0 0.6 46707 chrX 20527498 intergenic CG42579 + chrX 20550852 intron RunxB + chrX 20574205 intergenic CG42580 + chrX_4_20550001 chrX_20550001 RAL-900_95b 1010 chrX 20546532 20546563 chrX 20546718 20546749 5 185 1.5 3.5 2.5 1.4 217 chrX 20546532 intron RunxB + chrX 20546640 intron RunxB + chrX 20546749 intron RunxB + chrX_5_20545001 chrX_20545001 RAL-900_95b 1011 chrX 20559119 20559157 chrX 20559217 20559225 4 88 0.0 3.5 1.8 1.4 106 chrX 20559119 intron RunxB + chrX 20559172 intron RunxB + chrX 20559225 intron RunxB + chrX_4_20555001 chrX_20555001 RAL-900_95b 1012 chrX 20836722 20836755 chrX 20844328 20844377 roo 5 7607 3.5 1.0 2.2 1.6 7655 chrX 20836722 intron shakB - chrX 20840550 intron shakB - chrX 20844377 intron shakB - chrX_5_20840001 chrX_20840001 RAL-900_95b 1013 chrX 20940730 20940750 chrX 20942189 20942203 hobo 5 1457 2.5 1.5 2.0 1.7 1473 chrX 20940730 intergenic not near genes chrX 20941466 intergenic not near genes chrX 20942203 intergenic not near genes chrX_5_20940001 chrX_20940001 RAL-900_95b 1014 chrX 20981013 20981031 chrX 20981129 20981154 6 121 4.5 1.5 3.0 1.5 141 chrX 20981013 intergenic not near genes chrX 20981084 intergenic not near genes chrX 20981154 intergenic not near genes chrX_6_20980001 chrX_20980001 RAL-900_95b 1015 chrX 21042557 21042565 chrX 21045353 21045375 4 2790 9.5 13.0 11.2 0.3 2818 chrX 21042557 exon Mgstl + chrX 21043966 exon,3` UTR Mgstl +,CR44431 - chrX 21045375 intron Cbs + chrX_4_21040001 chrX_21040001 RAL-900_95b 1016 chrX 21086130 21086158 chrX 21087161 21087167 jockey 7 1027 2.0 2.0 2.0 2.3 1037 chrX 21086130 intergenic not near genes chrX 21086648 intergenic not near genes chrX 21087167 intergenic not near genes chrX_7_21085001 chrX_21085001 RAL-900_95b 1017 chrX 21088022 21088063 chrX 21088174 21088183 6 133 5.5 0.5 3.0 1.5 161 chrX 21088022 intergenic not near genes chrX 21088102 intergenic not near genes chrX 21088183 intergenic not near genes chrX_6_21085001 chrX_21085001 RAL-900_95b 1018 chrX 21303210 21303228 chrX 21303295 21303296 5 86 1.0 3.5 2.2 1.6 86 chrX 21303210 intron CG1718 - chrX 21303253 intron CG1718 - chrX 21303296 intron CG1718 - chrX_5_21300001 chrX_21300001 RAL-900_95b 1019 chrX 21328132 21328145 chrX 21328228 21328247 5 116 2.5 3.5 3.0 1.2 115 chrX 21328132 3` UTR CG1486 + chrX 21328190 intergenic CG1486 +,tty - chrX 21328247 intergenic CG1486 +,tty - chrX_5_21325001 chrX_21325001 RAL-900_95b 1020 chrX 21458678 21458720 chrX 21464134 21464176 Ivk 6 5454 2.5 2.5 2.5 1.7 5498 chrX 21458678 intergenic not near genes chrX 21461427 intergenic not near genes chrX 21464176 intergenic not near genes chrX_6_21460001 chrX_21460001 RAL-900_95b 1021 chrX 21565405 21565441 chrX 21565498 21565498 7 79 1.5 4.0 2.8 1.8 93 chrX 21565405 intergenic not near genes chrX 21565452 intergenic not near genes chrX 21565498 intergenic not near genes chrX_7_21565001 chrX_21565001 RAL-900_95b 1022 chrX 22574802 22574814 chrX 22575057 22575066 4 254 3.0 3.5 3.2 1.0 264 chrX 22574802 intergenic not near genes chrX 22574934 intergenic not near genes chrX 22575066 intergenic not near genes chrX_4_22570001 chrX_22570001 RAL-900_95b 1023 chrX 22574818 22574830 chrX 22575043 22575085 4 247 2.0 2.0 2.0 1.3 267 chrX 22574818 intergenic not near genes chrX 22574952 intergenic not near genes chrX 22575085 intergenic not near genes chrX_4_22570001 chrX_22570001 RAL-900_95b 1024 chrX 22697481 22697515 chrX 22701797 22701802 Juan 6 4312 3.5 4.0 3.8 1.2 4321 chrX 22697481 intron CR44997 + chrX 22699642 intron CR44997 + chrX 22701802 intron CR44997 + chrX_6_22695001 chrX_22695001 RAL-900_95b 1025 chrX 22764359 22764393 chrX 22764475 22764479 4 104 3.5 3.0 3.2 1.0 120 chrX 22764359 intron CR44997 + chrX 22764419 intron CR44997 + chrX 22764479 intron CR44997 + chrX_4_22760001 chrX_22760001 RAL-900_95b 1026 chrX 22987112 22987135 chrX 22989771 22989799 Burdock 4 2663 1.0 2.5 1.8 1.4 2687 chrX 22987112 intron,intron stnA -,stnB - chrX 22988456 intron,intron stnA -,stnB - chrX 22989799 intron,intron stnA -,stnB - chrX_4_22985001 chrX_22985001 RAL-900_95b 1027 chrX 22996298 22996314 chrX 23003552 23003568 roo 4 7254 5.0 2.5 3.8 0.8 7270 chrX 22996298 intron,intron stnA -,stnB - chrX 22999933 intron,intron stnA -,stnB - chrX 23003568 intron,intron stnA -,stnB - chrX_4_22995001 chrX_22995001 RAL-900_95b