SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 46303 46377 chr2L 46430 46505 31 128 9.5 9.0 9.2 3.0 202 chr2L 46303 intron Cda5 - chr2L 46404 intron Cda5 - chr2L 46505 intron Cda5 - chr2L_31_45001 chr2L_45001 RAL-900_125b 2 chr2L 47099 47180 chr2L 47300 47364 29 198 7.5 6.5 7.0 3.6 265 chr2L 47099 intron Cda5 - chr2L 47232 intron Cda5 - chr2L 47364 intron Cda5 - chr2L_29_45001 chr2L_45001 RAL-900_125b 3 chr2L 47422 47476 chr2L 52577 52622 jockey 26 5154 15.5 10.0 12.8 1.9 5200 chr2L 47422 intron Cda5 - chr2L 50022 intron Cda5 - chr2L 52622 intron Cda5 - chr2L_26_50001 chr2L_50001 RAL-900_125b 4 chr2L 325094 325122 chr2L 325221 325249 9 124 14.5 16.0 15.2 0.6 155 chr2L 325094 intron Plc21C + chr2L 325172 intron Plc21C + chr2L 325249 intron Plc21C + chr2L_9_325001 chr2L_325001 RAL-900_125b 5 chr2L 325125 325142 chr2L 325212 325233 9 111 13.5 13.5 13.5 0.6 108 chr2L 325125 intron Plc21C + chr2L 325179 intron Plc21C + chr2L 325233 intron Plc21C + chr2L_9_325001 chr2L_325001 RAL-900_125b 6 chr2L 328190 328222 chr2L 328317 328349 13 124 19.5 21.0 20.2 0.6 159 chr2L 328190 intron,intron Plc21C +,CG43755 - chr2L 328270 intron,intron Plc21C +,CG43755 - chr2L 328349 intron,intron Plc21C +,CG43755 - chr2L_13_325001 chr2L_325001 RAL-900_125b 7 chr2L 347848 347910 chr2L 355398 355460 blood 32 7549 9.5 9.0 9.2 3.1 7612 chr2L 347848 3` UTR Plc21C + chr2L 351654 intron Plc21C + chr2L 355460 3` UTR Plc21C + chr2L_32_350001 chr2L_350001 RAL-900_125b 8 chr2L 371392 371457 chr2L 371521 371545 30 126 11.0 13.0 12.0 2.3 153 chr2L 371392 intergenic not near genes chr2L 371468 intergenic not near genes chr2L 371545 intergenic not near genes chr2L_30_370001 chr2L_370001 RAL-900_125b 9 chr2L 425640 425666 chr2L 425791 425797 13 149 22.0 4.5 13.2 0.9 157 chr2L 425640 intergenic BBS8 + chr2L 425718 intergenic BBS8 + chr2L 425797 intergenic BBS8 + chr2L_13_425001 chr2L_425001 RAL-900_125b 10 chr2L 425670 425711 chr2L 425786 425868 17 153 7.5 4.0 5.8 2.5 198 chr2L 425670 intergenic BBS8 + chr2L 425769 intergenic BBS8 + chr2L 425868 intergenic not near genes chr2L_17_425001 chr2L_425001 RAL-900_125b 11 chr2L 504318 504348 chr2L 504444 504474 8 124 15.0 16.5 15.8 0.5 156 chr2L 504318 intron ush + chr2L 504396 intron ush + chr2L 504474 intron ush + chr2L_8_500001 chr2L_500001 RAL-900_125b 12 chr2L 549202 549272 chr2L 549445 549515 17 244 61.5 53.0 57.2 0.3 313 chr2L 549202 intron Ets21C - chr2L 549358 intron Ets21C - chr2L 549515 intron Ets21C - chr2L_17_545001 chr2L_545001 RAL-900_125b 13 chr2L 686912 686940 chr2L 695977 696024 roo 9 9083 13.5 8.5 11.0 0.8 9112 chr2L 686912 intron ds - chr2L 691468 intron ds - chr2L 696024 intron ds - chr2L_9_690001 chr2L_690001 RAL-900_125b 14 chr2L 721182 721189 chr2L 721444 721451 5 263 18.0 11.0 14.5 0.3 269 chr2L 721182 intergenic not near genes chr2L 721316 intergenic not near genes chr2L 721451 intergenic not near genes chr2L_5_720001 chr2L_720001 RAL-900_125b 15 chr2L 764512 764590 chr2L 764643 764721 38 131 8.0 10.5 9.2 3.7 209 chr2L 764512 intergenic not near genes chr2L 764616 intergenic not near genes chr2L 764721 intergenic not near genes chr2L_38_760001 chr2L_760001 RAL-900_125b 16 chr2L 770420 770491 chr2L 772251 772310 Bari1 23 1825 7.5 10.5 9.0 2.3 1890 chr2L 770420 intergenic not near genes chr2L 771365 intergenic not near genes chr2L 772310 intergenic CR44614 + chr2L_23_770001 chr2L_770001 RAL-900_125b 17 chr2L 798833 798899 chr2L 799192 799258 38 358 6.5 7.0 6.8 4.9 425 chr2L 798833 intergenic not near genes chr2L 799046 intergenic not near genes chr2L 799258 intergenic not near genes chr2L_38_795001 chr2L_795001 RAL-900_125b 18 chr2L 877799 877875 chr2L 877930 877981 22 126 3.5 7.0 5.2 3.5 182 chr2L 877799 3` UTR,exon CG15824 -,ninaA + chr2L 877890 3` UTR,intron CG15824 -,ninaA + chr2L 877981 3` UTR,exon CG15824 -,ninaA + chr2L_22_875001 chr2L_875001 RAL-900_125b 19 chr2L 898322 898378 chr2L 898448 898504 16 123 10.0 9.5 9.8 1.5 182 chr2L 898322 intergenic Lsp1beta +,CR45348 - chr2L 898413 intergenic Lsp1beta +,CR45348 - chr2L 898504 5` UTR Lsp1beta + chr2L_16_895001 chr2L_895001 RAL-900_125b 20 chr2L 898386 898395 chr2L 898446 898481 4 94 11.5 9.5 10.5 0.3 95 chr2L 898386 intergenic Lsp1beta +,CR45348 - chr2L 898434 intergenic Lsp1beta +,CR45348 - chr2L 898481 intergenic Lsp1beta +,CR45348 - chr2L_4_895001 chr2L_895001 RAL-900_125b 21 chr2L 927848 927883 chr2L 928015 928085 18 196 9.0 10.5 9.8 1.7 237 chr2L 927848 intron CG4341 + chr2L 927966 intron CG4341 + chr2L 928085 intron CG4341 + chr2L_18_925001 chr2L_925001 RAL-900_125b 22 chr2L 955987 955993 chr2L 956133 956139 4 146 0.0 28.5 14.2 0.3 152 chr2L 955987 intron CG4341 + chr2L 956063 intron CG4341 + chr2L 956139 intron CG4341 + chr2L_4_955001 chr2L_955001 RAL-900_125b 23 chr2L 964525 964573 chr2L 964659 964707 16 134 3.5 16.0 9.8 1.5 182 chr2L 964525 intergenic not near genes chr2L 964616 intergenic not near genes chr2L 964707 intergenic not near genes chr2L_16_960001 chr2L_960001 RAL-900_125b 24 chr2L 976839 976904 chr2L 984525 984590 roo 26 7685 10.5 15.0 12.8 1.9 7751 chr2L 976839 intergenic not near genes chr2L 980714 intergenic not near genes chr2L 984590 intergenic not near genes chr2L_26_980001 chr2L_980001 RAL-900_125b 25 chr2L 996675 996720 chr2L 1005820 1005865 roo 23 9145 8.0 7.5 7.8 2.6 9190 chr2L 996675 intergenic not near genes chr2L 1001270 intergenic not near genes chr2L 1005865 intergenic not near genes chr2L_23_1000001 chr2L_1000001 RAL-900_125b 26 chr2L 1025077 1025120 chr2L 1025202 1025230 23 127 11.5 9.0 10.2 2.1 153 chr2L 1025077 intron IA-2 - chr2L 1025154 intron IA-2 - chr2L 1025230 intron IA-2 - chr2L_23_1025001 chr2L_1025001 RAL-900_125b 27 chr2L 1036422 1036427 chr2L 1036554 1036566 6 136 25.0 4.5 14.8 0.4 144 chr2L 1036422 intron IA-2 - chr2L 1036494 intron IA-2 - chr2L 1036566 intron IA-2 - chr2L_6_1035001 chr2L_1035001 RAL-900_125b 28 chr2L 1036437 1036476 chr2L 1036550 1036562 16 124 10.5 4.0 7.2 2.0 125 chr2L 1036437 intron IA-2 - chr2L 1036500 intron IA-2 - chr2L 1036562 intron IA-2 - chr2L_16_1035001 chr2L_1035001 RAL-900_125b 29 chr2L 1066048 1066118 chr2L 1066179 1066234 31 129 8.0 9.0 8.5 3.3 186 chr2L 1066048 intron S - chr2L 1066141 intron S - chr2L 1066234 intron S - chr2L_31_1065001 chr2L_1065001 RAL-900_125b 30 chr2L 1094212 1094241 chr2L 1094338 1094367 12 126 11.5 0.0 5.8 1.8 155 chr2L 1094212 intron CG4629 - chr2L 1094290 intron CG4629 - chr2L 1094367 intron CG4629 - chr2L_12_1090001 chr2L_1090001 RAL-900_125b 31 chr2L 1156815 1156893 chr2L 1156970 1157048 24 154 6.5 10.0 8.2 2.6 233 chr2L 1156815 intron capt - chr2L 1156932 intron capt - chr2L 1157048 intron capt - chr2L_24_1155001 chr2L_1155001 RAL-900_125b 32 chr2L 1220087 1220156 chr2L 1227603 1227672 blood 30 7515 6.5 5.5 6.0 4.3 7585 chr2L 1220087 intron CG42329 + chr2L 1223880 intron CG42329 + chr2L 1227672 intron CG42329 + chr2L_30_1220001 chr2L_1220001 RAL-900_125b 33 chr2L 1249871 1249911 chr2L 1249997 1250037 11 119 12.0 2.0 7.0 1.4 166 chr2L 1249871 intergenic not near genes chr2L 1249954 intergenic not near genes chr2L 1250037 intergenic not near genes chr2L_11_1245001 chr2L_1245001 RAL-900_125b 34 chr2L 1301713 1301774 chr2L 1302302 1302363 gypsy 41 588 8.0 8.0 8.0 4.6 650 chr2L 1301713 intergenic not near genes chr2L 1302038 intergenic not near genes chr2L 1302363 intergenic not near genes chr2L_41_1300001 chr2L_1300001 RAL-900_125b 35 chr2L 1328171 1328237 chr2L 1328316 1328380 22 144 10.5 8.0 9.2 2.2 209 chr2L 1328171 intergenic not near genes chr2L 1328276 intergenic not near genes chr2L 1328380 intergenic not near genes chr2L_22_1325001 chr2L_1325001 RAL-900_125b 36 chr2L 1400747 1400815 chr2L 1401153 1401221 37 405 6.5 9.5 8.0 4.1 474 chr2L 1400747 intron lea - chr2L 1400984 intron lea - chr2L 1401221 intron lea - chr2L_37_1400001 chr2L_1400001 RAL-900_125b 37 chr2L 1458196 1458256 chr2L 1458323 1458383 28 123 10.5 10.0 10.2 2.5 187 chr2L 1458196 intergenic not near genes chr2L 1458290 intergenic not near genes chr2L 1458383 intergenic not near genes chr2L_28_1455001 chr2L_1455001 RAL-900_125b 38 chr2L 1570656 1570676 chr2L 1573578 1573598 F-element 5 2922 17.5 11.0 14.2 0.3 2942 chr2L 1570656 intron haf + chr2L 1572127 intron haf + chr2L 1573598 intron haf + chr2L_5_1570001 chr2L_1570001 RAL-900_125b 39 chr2L 1570677 1570712 chr2L 1573569 1573634 F-element 16 2920 8.5 9.5 9.0 1.6 2957 chr2L 1570677 intron haf + chr2L 1572156 intron haf + chr2L 1573634 intron haf + chr2L_16_1570001 chr2L_1570001 RAL-900_125b 40 chr2L 1590926 1590980 chr2L 1591052 1591106 24 123 10.0 10.0 10.0 2.2 180 chr2L 1590926 intron haf + chr2L 1591016 intron haf + chr2L 1591106 intron haf + chr2L_24_1590001 chr2L_1590001 RAL-900_125b 41 chr2L 1628791 1628851 chr2L 1628930 1628990 12 139 7.0 7.0 7.0 1.5 199 chr2L 1628791 intergenic not near genes chr2L 1628890 intergenic not near genes chr2L 1628990 intergenic not near genes chr2L_12_1625001 chr2L_1625001 RAL-900_125b 42 chr2L 1634721 1634762 chr2L 1634859 1634901 8 138 15.5 14.0 14.8 0.5 180 chr2L 1634721 intergenic not near genes chr2L 1634811 intergenic not near genes chr2L 1634901 intergenic not near genes chr2L_8_1630001 chr2L_1630001 RAL-900_125b 43 chr2L 1661971 1662032 chr2L 1662106 1662175 27 138 6.0 6.0 6.0 3.9 204 chr2L 1661971 intron chinmo + chr2L 1662073 intron chinmo + chr2L 1662175 intron chinmo + chr2L_27_1660001 chr2L_1660001 RAL-900_125b 44 chr2L 1678909 1678999 chr2L 1686442 1686514 blood 21 7530 0.0 11.0 5.5 3.2 7605 chr2L 1678909 intron chinmo + chr2L 1682712 intron chinmo + chr2L 1686514 intron chinmo + chr2L_21_1680001 chr2L_1680001 RAL-900_125b 45 chr2L 1711318 1711326 chr2L 1711692 1711700 mdg3 5 374 15.0 6.5 10.8 0.4 382 chr2L 1711318 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711509 3` UTR frtz - chr2L 1711700 3` UTR frtz - chr2L_5_1710001 chr2L_1710001 RAL-900_125b 46 chr2L 1711328 1711377 chr2L 1711686 1711751 mdg3 23 370 8.0 5.5 6.8 2.9 423 chr2L 1711328 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711540 3` UTR frtz - chr2L 1711751 3` UTR frtz - chr2L_23_1710001 chr2L_1710001 RAL-900_125b 47 chr2L 1883370 1883447 chr2L 1884003 1884015 29 629 6.0 5.0 5.5 4.5 645 chr2L 1883370 intron CG15358 - chr2L 1883692 intron CG15358 - chr2L 1884015 exon CG15358 - chr2L_29_1880001 chr2L_1880001 RAL-900_125b 48 chr2L 1908049 1908091 chr2L 1908195 1908237 21 146 3.5 7.5 5.5 3.2 188 chr2L 1908049 intron CG7337 + chr2L 1908143 intron CG7337 + chr2L 1908237 intron CG7337 + chr2L_21_1905001 chr2L_1905001 RAL-900_125b 49 chr2L 1930556 1930629 chr2L 1930684 1930757 34 126 8.5 11.0 9.8 3.1 201 chr2L 1930556 intron CG7337 + chr2L 1930656 intron CG7337 + chr2L 1930757 intron CG7337 + chr2L_34_1930001 chr2L_1930001 RAL-900_125b 50 chr2L 1950317 1950394 chr2L 1950451 1950519 12 133 7.0 5.0 6.0 1.7 202 chr2L 1950317 3` UTR erm - chr2L 1950418 3` UTR erm - chr2L 1950519 3` UTR erm - chr2L_12_1950001 chr2L_1950001 RAL-900_125b 51 chr2L 1957871 1957945 chr2L 1958003 1958076 14 131 11.0 10.5 10.8 1.2 205 chr2L 1957871 intron erm - chr2L 1957974 intron erm - chr2L 1958076 intron erm - chr2L_14_1955001 chr2L_1955001 RAL-900_125b 52 chr2L 1987942 1987961 chr2L 1988107 1988126 17 165 7.0 9.5 8.2 1.8 184 chr2L 1987942 intergenic Got2 -,Npc2a + chr2L 1988034 intergenic Npc2a +,Got2 - chr2L 1988126 intergenic Npc2a +,Got2 - chr2L_17_1985001 chr2L_1985001 RAL-900_125b 53 chr2L 2001741 2001814 chr2L 2001869 2001940 23 127 9.0 11.5 10.2 2.1 199 chr2L 2001741 intron,5` UTR CG33543 -,CR43464 + chr2L 2001840 intron,5` UTR CG33543 -,CR43464 + chr2L 2001940 intron,5` UTR CG33543 -,CR43464 + chr2L_23_2000001 chr2L_2000001 RAL-900_125b 54 chr2L 2016078 2016156 chr2L 2016208 2016286 30 130 9.0 10.0 9.5 2.9 208 chr2L 2016078 intron CG4238 + chr2L 2016182 intron CG4238 + chr2L 2016286 intron CG4238 + chr2L_30_2015001 chr2L_2015001 RAL-900_125b 55 chr2L 2047764 2047827 chr2L 2048009 2048066 14 237 8.0 0.0 4.0 2.8 302 chr2L 2047764 3` UTR Kebab + chr2L 2047915 3` UTR Kebab + chr2L 2048066 intergenic Kebab + chr2L_14_2045001 chr2L_2045001 RAL-900_125b 56 chr2L 2073315 2073356 chr2L 2073440 2073470 12 115 8.0 17.0 12.5 0.9 155 chr2L 2073315 intron dpr3 - chr2L 2073392 intron dpr3 - chr2L 2073470 intron dpr3 - chr2L_12_2070001 chr2L_2070001 RAL-900_125b 57 chr2L 2100376 2100398 chr2L 2109551 2109551 roo 6 9184 11.0 13.5 12.2 0.5 9175 chr2L 2100376 intron dpr3 - chr2L 2104964 intron dpr3 - chr2L 2109551 intron dpr3 - chr2L_6_2100001 chr2L_2100001 RAL-900_125b 58 chr2L 2112069 2112136 chr2L 2119776 2119825 opus 19 7707 7.0 7.0 7.0 2.4 7756 chr2L 2112069 intergenic not near genes chr2L 2115947 intergenic not near genes chr2L 2119825 intergenic not near genes chr2L_19_2115001 chr2L_2115001 RAL-900_125b 59 chr2L 2125521 2125568 chr2L 2125813 2125860 20 293 23.0 61.0 42.0 0.5 339 chr2L 2125521 intergenic not near genes chr2L 2125690 intergenic not near genes chr2L 2125860 intergenic not near genes chr2L_20_2125001 chr2L_2125001 RAL-900_125b 60 chr2L 2250373 2250442 chr2L 2251190 2251256 8 816 10.5 0.5 5.5 1.2 883 chr2L 2250373 intergenic Ser12 - chr2L 2250814 exon Ser12 - chr2L 2251256 exon Ser12 - chr2L_8_2250001 chr2L_2250001 RAL-900_125b 61 chr2L 2256421 2256475 chr2L 2256551 2256605 21 130 4.5 8.5 6.5 2.8 184 chr2L 2256421 intergenic not near genes chr2L 2256513 intergenic not near genes chr2L 2256605 intergenic not near genes chr2L_21_2255001 chr2L_2255001 RAL-900_125b 62 chr2L 2257069 2257144 chr2L 2257213 2257288 35 142 7.5 4.5 6.0 5.0 219 chr2L 2257069 intergenic not near genes chr2L 2257178 intergenic CR44787 - chr2L 2257288 intergenic CR44787 - chr2L_35_2255001 chr2L_2255001 RAL-900_125b 63 chr2L 2260767 2260822 chr2L 2260900 2260958 24 135 7.0 8.0 7.5 2.8 191 chr2L 2260767 intergenic not near genes chr2L 2260862 intergenic not near genes chr2L 2260958 intergenic not near genes chr2L_24_2260001 chr2L_2260001 RAL-900_125b 64 chr2L 2290535 2290615 chr2L 2290661 2290696 22 120 7.0 10.5 8.8 2.2 161 chr2L 2290535 exon robl22E - chr2L 2290616 exon robl22E - chr2L 2290696 intron robl22E - chr2L_22_2290001 chr2L_2290001 RAL-900_125b 65 chr2L 2294010 2294070 chr2L 2299244 2299325 copia 15 5241 7.5 11.5 9.5 1.4 5315 chr2L 2294010 intergenic not near genes chr2L 2296668 intergenic not near genes chr2L 2299325 intergenic not near genes chr2L_15_2295001 chr2L_2295001 RAL-900_125b 66 chr2L 2302001 2302075 chr2L 2302133 2302207 28 131 5.5 5.0 5.2 4.5 206 chr2L 2302001 intergenic not near genes chr2L 2302104 intergenic not near genes chr2L 2302207 intergenic not near genes chr2L_28_2300001 chr2L_2300001 RAL-900_125b 67 chr2L 2317074 2317129 chr2L 2317295 2317350 12 221 40.5 43.5 42.0 0.3 276 chr2L 2317074 intron,intron CG9967 -,eys + chr2L 2317212 intron,intron CG9967 -,eys + chr2L 2317350 intron,intron CG9967 -,eys + chr2L_12_2315001 chr2L_2315001 RAL-900_125b 68 chr2L 2331574 2331627 chr2L 2331700 2331753 27 125 11.0 14.5 12.8 2.0 179 chr2L 2331574 intron,intron CG9967 -,eys + chr2L 2331664 intron,intron CG9967 -,eys + chr2L 2331753 intron,intron CG9967 -,eys + chr2L_27_2330001 chr2L_2330001 RAL-900_125b 69 chr2L 2396247 2396289 chr2L 2396375 2396417 13 128 6.0 6.0 6.0 1.9 170 chr2L 2396247 intron VGlut + chr2L 2396332 intron VGlut + chr2L 2396417 intron VGlut + chr2L_13_2395001 chr2L_2395001 RAL-900_125b 70 chr2L 2447785 2447854 chr2L 2447915 2447984 36 130 10.5 9.5 10.0 3.3 199 chr2L 2447785 intron dpp + chr2L 2447884 intron dpp + chr2L 2447984 intron dpp + chr2L_36_2445001 chr2L_2445001 RAL-900_125b 71 chr2L 2497596 2497615 chr2L 2497722 2497741 14 126 7.5 11.0 9.2 1.4 145 chr2L 2497596 3` UTR oaf + chr2L 2497668 3` UTR oaf + chr2L 2497741 3` UTR oaf + chr2L_14_2495001 chr2L_2495001 RAL-900_125b 72 chr2L 2503665 2503742 chr2L 2504494 2504571 31 825 8.0 7.0 7.5 3.6 906 chr2L 2503665 intergenic not near genes chr2L 2504118 intergenic not near genes chr2L 2504571 intergenic not near genes chr2L_31_2500001 chr2L_2500001 RAL-900_125b 73 chr2L 2543434 2543509 chr2L 2543592 2543661 30 155 5.5 10.5 8.0 3.3 227 chr2L 2543434 intergenic not near genes chr2L 2543548 intergenic not near genes chr2L 2543661 intergenic not near genes chr2L_30_2540001 chr2L_2540001 RAL-900_125b 74 chr2L 2565513 2565567 chr2L 2571631 2571685 297 19 6117 7.5 6.5 7.0 2.4 6172 chr2L 2565513 exon Cyp309a2 - chr2L 2568599 intron Cyp309a2 - chr2L 2571685 exon Cyp309a2 - chr2L_19_2565001 chr2L_2565001 RAL-900_125b 75 chr2L 2587778 2587802 chr2L 2587901 2587931 10 127 17.0 9.0 13.0 0.7 153 chr2L 2587778 intergenic not near genes chr2L 2587854 intergenic not near genes chr2L 2587931 intergenic not near genes chr2L_10_2585001 chr2L_2585001 RAL-900_125b 76 chr2L 2587804 2587840 chr2L 2587898 2587969 16 118 7.5 9.0 8.2 1.7 165 chr2L 2587804 intergenic not near genes chr2L 2587886 intergenic not near genes chr2L 2587969 intergenic not near genes chr2L_16_2585001 chr2L_2585001 RAL-900_125b 77 chr2L 2617989 2618064 chr2L 2618118 2618172 25 127 6.0 2.0 4.0 5.0 183 chr2L 2617989 intergenic not near genes chr2L 2618080 intergenic not near genes chr2L 2618172 intergenic not near genes chr2L_25_2615001 chr2L_2615001 RAL-900_125b 78 chr2L 2620571 2620649 chr2L 2620725 2620801 23 152 5.0 8.0 6.5 3.1 230 chr2L 2620571 3` UTR CG43403 + chr2L 2620686 3` UTR CG43403 + chr2L 2620801 intergenic CG43403 + chr2L_23_2620001 chr2L_2620001 RAL-900_125b 79 chr2L 2661154 2661223 chr2L 2663039 2663040 I-element 11 1870 9.0 6.0 7.5 1.3 1886 chr2L 2661154 intergenic not near genes chr2L 2662097 intergenic not near genes chr2L 2663040 intergenic not near genes chr2L_11_2660001 chr2L_2660001 RAL-900_125b 80 chr2L 2667592 2667650 chr2L 2667713 2667752 27 125 9.0 6.0 7.5 3.2 160 chr2L 2667592 intergenic not near genes chr2L 2667672 intergenic not near genes chr2L 2667752 intergenic not near genes chr2L_27_2665001 chr2L_2665001 RAL-900_125b 81 chr2L 2698840 2698895 chr2L 2698977 2699032 16 135 0.0 10.5 5.2 2.6 192 chr2L 2698840 intron CG31690 + chr2L 2698936 intron CG31690 + chr2L 2699032 intron CG31690 + chr2L_16_2695001 chr2L_2695001 RAL-900_125b 82 chr2L 2701009 2701037 chr2L 2701140 2701167 10 130 22.0 7.5 14.8 0.6 158 chr2L 2701009 intron CG31690 + chr2L 2701088 intron CG31690 + chr2L 2701167 intron CG31690 + chr2L_10_2700001 chr2L_2700001 RAL-900_125b 83 chr2L 2713315 2713363 chr2L 2713449 2713495 24 133 12.0 11.5 11.8 1.9 180 chr2L 2713315 intron CG31690 + chr2L 2713405 intron CG31690 + chr2L 2713495 intron CG31690 + chr2L_24_2710001 chr2L_2710001 RAL-900_125b 84 chr2L 2724361 2724428 chr2L 2724487 2724554 22 125 5.5 7.5 6.5 2.9 193 chr2L 2724361 intergenic not near genes chr2L 2724458 intergenic not near genes chr2L 2724554 intergenic not near genes chr2L_22_2720001 chr2L_2720001 RAL-900_125b 85 chr2L 2772576 2772619 chr2L 2779209 2779255 297 12 6634 10.5 14.0 12.2 0.9 6679 chr2L 2772576 3` UTR Syt1 - chr2L 2775916 intron Syt1 - chr2L 2779255 3` UTR Syt1 - chr2L_12_2775001 chr2L_2775001 RAL-900_125b 86 chr2L 2782903 2782931 chr2L 2783023 2783058 9 122 9.0 6.0 7.5 1.1 155 chr2L 2782903 intron Syt1 - chr2L 2782980 intron Syt1 - chr2L 2783058 3` UTR Syt1 - chr2L_9_2780001 chr2L_2780001 RAL-900_125b 87 chr2L 2804192 2804195 chr2L 2804331 2804334 4 139 27.5 8.0 17.8 0.2 142 chr2L 2804192 intergenic not near genes chr2L 2804263 intergenic not near genes chr2L 2804334 intergenic not near genes chr2L_4_2800001 chr2L_2800001 RAL-900_125b 88 chr2L 2804198 2804213 chr2L 2804330 2804352 7 138 23.5 8.0 15.8 0.4 154 chr2L 2804198 intergenic not near genes chr2L 2804275 intergenic not near genes chr2L 2804352 intergenic not near genes chr2L_7_2800001 chr2L_2800001 RAL-900_125b 89 chr2L 2804215 2804263 chr2L 2804329 2804402 23 135 11.0 7.5 9.2 2.3 187 chr2L 2804215 intergenic not near genes chr2L 2804308 intergenic not near genes chr2L 2804402 intergenic not near genes chr2L_23_2800001 chr2L_2800001 RAL-900_125b 90 chr2L 2826489 2826502 chr2L 2826631 2826644 5 142 17.5 7.0 12.2 0.4 155 chr2L 2826489 intron Duox - chr2L 2826566 intron Duox - chr2L 2826644 intron Duox - chr2L_5_2825001 chr2L_2825001 RAL-900_125b 91 chr2L 2826505 2826576 chr2L 2826629 2826711 23 134 2.5 7.0 4.8 4.0 206 chr2L 2826505 intron Duox - chr2L 2826608 intron Duox - chr2L 2826711 intron Duox - chr2L_23_2825001 chr2L_2825001 RAL-900_125b 92 chr2L 2830367 2830418 chr2L 2830547 2830598 21 180 7.0 9.0 8.0 2.3 231 chr2L 2830367 intergenic Duox - chr2L 2830482 intergenic Duox - chr2L 2830598 intergenic Duox - chr2L_21_2830001 chr2L_2830001 RAL-900_125b 93 chr2L 2937371 2937444 chr2L 2937498 2937571 31 127 11.0 7.5 9.2 3.0 200 chr2L 2937371 intron lilli + chr2L 2937471 intron lilli + chr2L 2937571 intron lilli + chr2L_31_2935001 chr2L_2935001 RAL-900_125b 94 chr2L 3072937 3072991 chr2L 3078236 3078290 copia 17 5299 10.0 10.5 10.2 1.5 5353 chr2L 3072937 intron toc - chr2L 3075614 intron toc - chr2L 3078290 intron toc - chr2L_17_3075001 chr2L_3075001 RAL-900_125b 95 chr2L 3112431 3112486 chr2L 3112561 3112616 18 127 11.0 0.0 5.5 2.8 185 chr2L 3112431 intron toc - chr2L 3112524 intron toc - chr2L 3112616 intron toc - chr2L_18_3110001 chr2L_3110001 RAL-900_125b 96 chr2L 3147246 3147301 chr2L 3147373 3147422 22 123 9.0 10.0 9.5 2.1 176 chr2L 3147246 3` UTR Mad - chr2L 3147334 3` UTR Mad - chr2L 3147422 exon Mad - chr2L_22_3145001 chr2L_3145001 RAL-900_125b 97 chr2L 3197217 3197256 chr2L 3197483 3197522 4 266 10.5 8.5 9.5 0.4 305 chr2L 3197217 intron CG34393 - chr2L 3197370 intron CG34393 - chr2L 3197522 intron CG34393 - chr2L_4_3195001 chr2L_3195001 RAL-900_125b 98 chr2L 3202706 3202764 chr2L 3210185 3210243 mdg1 27 7479 14.5 11.0 12.8 2.0 7537 chr2L 3202706 intergenic not near genes chr2L 3206474 intergenic not near genes chr2L 3210243 intergenic CR45336 + chr2L_27_3205001 chr2L_3205001 RAL-900_125b 99 chr2L 3228165 3228217 chr2L 3228293 3228345 14 127 8.5 8.5 8.5 1.5 180 chr2L 3228165 intergenic not near genes chr2L 3228255 intergenic not near genes chr2L 3228345 intergenic not near genes chr2L_14_3225001 chr2L_3225001 RAL-900_125b 100 chr2L 3228224 3228241 chr2L 3228341 3228370 9 127 4.0 18.0 11.0 0.8 146 chr2L 3228224 intergenic not near genes chr2L 3228297 intergenic not near genes chr2L 3228370 intergenic not near genes chr2L_9_3225001 chr2L_3225001 RAL-900_125b 101 chr2L 3236871 3236945 chr2L 3237001 3237075 42 128 9.5 9.0 9.2 4.1 204 chr2L 3236871 intergenic not near genes chr2L 3236973 intergenic not near genes chr2L 3237075 intergenic not near genes chr2L_42_3235001 chr2L_3235001 RAL-900_125b 102 chr2L 3251465 3251517 chr2L 3259080 3259132 springer 19 7613 11.5 13.5 12.5 1.4 7667 chr2L 3251465 intergenic not near genes chr2L 3255298 intergenic not near genes chr2L 3259132 intergenic not near genes chr2L_19_3255001 chr2L_3255001 RAL-900_125b 103 chr2L 3272921 3272961 chr2L 3273047 3273095 10 133 1.0 11.0 6.0 1.4 174 chr2L 3272921 intergenic not near genes chr2L 3273008 intergenic not near genes chr2L 3273095 intergenic not near genes chr2L_10_3270001 chr2L_3270001 RAL-900_125b 104 chr2L 3291206 3291269 chr2L 3291336 3291366 19 126 5.5 13.0 9.2 1.9 160 chr2L 3291206 intergenic CG9664 - chr2L 3291286 3` UTR CG9664 - chr2L 3291366 3` UTR CG9664 - chr2L_19_3290001 chr2L_3290001 RAL-900_125b 105 chr2L 3312078 3312114 chr2L 3312233 3312285 5 168 0.0 0.0 0.0 5.0 207 chr2L 3312078 intron CG3277 + chr2L 3312182 intron CG3277 + chr2L 3312285 intron CG3277 + chr2L_5_3310001 chr2L_3310001 RAL-900_125b 106 chr2L 3323219 3323282 chr2L 3323376 3323439 27 156 6.5 13.0 9.8 2.5 220 chr2L 3323219 intergenic CG8837 + chr2L 3323329 intergenic CG8837 + chr2L 3323439 intergenic CG8837 + chr2L_27_3320001 chr2L_3320001 RAL-900_125b 107 chr2L 3388550 3388624 chr2L 3388841 3388915 pogo 25 290 7.0 5.0 6.0 3.6 365 chr2L 3388550 intergenic CG42460 - chr2L 3388732 intergenic CG42460 - chr2L 3388915 intergenic CG42460 -,CR44791 + chr2L_25_3385001 chr2L_3385001 RAL-900_125b 108 chr2L 3416941 3416951 chr2L 3417042 3417050 5 102 9.0 8.5 8.8 0.5 109 chr2L 3416941 intron,exon pgant2 -,CG31952 + chr2L 3416996 intron,exon pgant2 -,CG31952 + chr2L 3417050 intron,exon pgant2 -,CG31952 + chr2L_5_3415001 chr2L_3415001 RAL-900_125b 109 chr2L 3423491 3423510 chr2L 3424010 3424029 12 518 25.0 8.5 16.8 0.7 538 chr2L 3423491 intron pgant2 - chr2L 3423760 intron pgant2 - chr2L 3424029 intron pgant2 - chr2L_12_3420001 chr2L_3420001 RAL-900_125b 110 chr2L 3423511 3423569 chr2L 3424005 3424082 38 516 9.0 7.5 8.2 4.1 571 chr2L 3423511 intron pgant2 - chr2L 3423796 intron pgant2 - chr2L 3424082 intron pgant2 - chr2L_38_3420001 chr2L_3420001 RAL-900_125b 111 chr2L 3437501 3437569 chr2L 3437876 3437909 22 373 8.0 6.0 7.0 2.8 408 chr2L 3437501 intergenic not near genes chr2L 3437705 intergenic not near genes chr2L 3437909 intergenic not near genes chr2L_22_3435001 chr2L_3435001 RAL-900_125b 112 chr2L 3438519 3438579 chr2L 3438651 3438709 33 130 9.0 10.0 9.5 3.1 190 chr2L 3438519 intergenic not near genes chr2L 3438614 intergenic not near genes chr2L 3438709 intergenic not near genes chr2L_33_3435001 chr2L_3435001 RAL-900_125b 113 chr2L 3522983 3523053 chr2L 3523145 3523216 27 161 6.0 6.0 6.0 3.9 233 chr2L 3522983 exon Sr-CIV - chr2L 3523100 intron Sr-CIV - chr2L 3523216 exon Sr-CIV - chr2L_27_3520001 chr2L_3520001 RAL-900_125b 114 chr2L 3575545 3575586 chr2L 3575650 3575713 13 119 10.0 10.0 10.0 1.2 168 chr2L 3575545 5` UTR CR43822 + chr2L 3575629 5` UTR CR43822 + chr2L 3575713 5` UTR CR43822 + chr2L_13_3575001 chr2L_3575001 RAL-900_125b 115 chr2L 3616568 3616592 chr2L 3616695 3616709 8 126 3.0 8.5 5.8 1.2 141 chr2L 3616568 5` UTR CR44310 + chr2L 3616638 5` UTR CR44310 + chr2L 3616709 5` UTR CR44310 + chr2L_8_3615001 chr2L_3615001 RAL-900_125b 116 chr2L 3632343 3632378 chr2L 3632516 3632551 19 173 7.5 16.5 12.0 1.5 208 chr2L 3632343 intron for - chr2L 3632447 intron for - chr2L 3632551 intron for - chr2L_19_3630001 chr2L_3630001 RAL-900_125b 117 chr2L 3643423 3643452 chr2L 3643543 3643583 11 125 9.0 5.0 7.0 1.4 160 chr2L 3643423 intron for - chr2L 3643503 intron for - chr2L 3643583 intron for - chr2L_11_3640001 chr2L_3640001 RAL-900_125b 118 chr2L 3649748 3649809 chr2L 3655001 3655062 copia 26 5253 14.0 13.5 13.8 1.8 5314 chr2L 3649748 intron for - chr2L 3652405 intron for - chr2L 3655062 intron for - chr2L_26_3650001 chr2L_3650001 RAL-900_125b 119 chr2L 3663295 3663311 chr2L 3663424 3663440 8 129 16.0 18.5 17.2 0.4 145 chr2L 3663295 5` UTR CG34340 + chr2L 3663368 intron CG34340 + chr2L 3663440 intron CG34340 + chr2L_8_3660001 chr2L_3660001 RAL-900_125b 120 chr2L 3663313 3663342 chr2L 3663412 3663471 15 127 11.5 15.5 13.5 1.0 158 chr2L 3663313 intron CG34340 + chr2L 3663392 intron CG34340 + chr2L 3663471 intron CG34340 + chr2L_15_3660001 chr2L_3660001 RAL-900_125b 121 chr2L 3685983 3686054 chr2L 3686121 3686192 19 138 4.5 11.0 7.8 2.2 209 chr2L 3685983 intron CG34340 + chr2L 3686088 intron CG34340 + chr2L 3686192 intron CG34340 + chr2L_19_3685001 chr2L_3685001 RAL-900_125b 122 chr2L 3755596 3755644 chr2L 3755752 3755797 24 155 13.5 10.0 11.8 1.9 201 chr2L 3755596 intergenic not near genes chr2L 3755696 intergenic not near genes chr2L 3755797 intergenic not near genes chr2L_24_3755001 chr2L_3755001 RAL-900_125b 123 chr2L 3755653 3755664 chr2L 3755810 3755822 5 157 9.0 26.5 17.8 0.3 169 chr2L 3755653 intergenic not near genes chr2L 3755738 intergenic not near genes chr2L 3755822 intergenic not near genes chr2L_5_3755001 chr2L_3755001 RAL-900_125b 124 chr2L 3784754 3784822 chr2L 3785663 3785731 20 909 48.0 42.5 45.2 0.4 977 chr2L 3784754 intergenic CG31960 + chr2L 3785242 exon CG31960 + chr2L 3785731 intergenic CG31958 +,CG31960 + chr2L_20_3785001 chr2L_3785001 RAL-900_125b 125 chr2L 3784703 3784753 chr2L 3785589 3785639 13 887 50.5 50.0 50.2 0.3 936 chr2L 3784703 intergenic CG31960 + chr2L 3785171 exon CG31960 + chr2L 3785639 intergenic CG31960 +,CG31958 + chr2L_13_3785001 chr2L_3785001 RAL-900_125b 126 chr2L 3787607 3787673 chr2L 3787771 3787836 40 164 11.0 9.5 10.2 3.6 229 chr2L 3787607 intron CG3921 + chr2L 3787722 intron CG3921 + chr2L 3787836 intron CG3921 + chr2L_40_3785001 chr2L_3785001 RAL-900_125b 127 chr2L 3788364 3788389 chr2L 3788508 3788533 14 144 11.5 5.5 8.5 1.5 169 chr2L 3788364 intron CG3921 + chr2L 3788448 intron CG3921 + chr2L 3788533 intron CG3921 + chr2L_14_3785001 chr2L_3785001 RAL-900_125b 128 chr2L 3844298 3844320 chr2L 3844460 3844471 8 161 15.0 6.0 10.5 0.7 173 chr2L 3844298 intergenic not near genes chr2L 3844384 intergenic not near genes chr2L 3844471 intergenic not near genes chr2L_8_3840001 chr2L_3840001 RAL-900_125b 129 chr2L 3896266 3896327 chr2L 3896395 3896456 8 129 9.5 0.0 4.8 1.4 190 chr2L 3896266 intron capu - chr2L 3896361 intron capu - chr2L 3896456 intron capu - chr2L_8_3895001 chr2L_3895001 RAL-900_125b 130 chr2L 3936604 3936651 chr2L 3936734 3936781 13 129 7.5 9.0 8.2 1.4 177 chr2L 3936604 intron fred - chr2L 3936692 intron fred - chr2L 3936781 intron fred - chr2L_13_3935001 chr2L_3935001 RAL-900_125b 131 chr2L 3938326 3938347 chr2L 3938464 3938485 6 138 4.0 0.0 2.0 2.0 159 chr2L 3938326 intron fred - chr2L 3938406 intron fred - chr2L 3938485 intron fred - chr2L_6_3935001 chr2L_3935001 RAL-900_125b 132 chr2L 3943753 3943810 chr2L 3943894 3943951 27 141 11.0 8.0 9.5 2.6 198 chr2L 3943753 intron fred - chr2L 3943852 intron fred - chr2L 3943951 intron fred - chr2L_27_3940001 chr2L_3940001 RAL-900_125b 133 chr2L 4034086 4034152 chr2L 4034424 4034494 27 340 57.0 64.5 60.8 0.4 408 chr2L 4034086 intron ed + chr2L 4034290 intron ed + chr2L 4034494 intron ed + chr2L_27_4030001 chr2L_4030001 RAL-900_125b 134 chr2L 4037754 4037809 chr2L 4037891 4037946 26 137 7.5 7.5 7.5 3.1 192 chr2L 4037754 intron ed + chr2L 4037850 intron ed + chr2L 4037946 intron ed + chr2L_26_4035001 chr2L_4035001 RAL-900_125b 135 chr2L 4066001 4066036 chr2L 4068876 4068905 Juan 16 2874 12.5 11.5 12.0 1.2 2904 chr2L 4066001 intron ed + chr2L 4067453 intron ed + chr2L 4068905 intron ed + chr2L_16_4065001 chr2L_4065001 RAL-900_125b 136 chr2L 4066040 4066050 chr2L 4068862 4068925 Juan 4 2862 10.0 7.0 8.5 0.4 2885 chr2L 4066040 intron ed + chr2L 4067482 intron ed + chr2L 4068925 intron ed + chr2L_4_4065001 chr2L_4065001 RAL-900_125b 137 chr2L 4109916 4109935 chr2L 4110050 4110069 11 133 6.0 11.0 8.5 1.2 153 chr2L 4109916 intron ed + chr2L 4109992 intron ed + chr2L 4110069 intron ed + chr2L_11_4105001 chr2L_4105001 RAL-900_125b 138 chr2L 4128784 4128848 chr2L 4128908 4128943 24 123 11.0 6.5 8.8 2.4 159 chr2L 4128784 intergenic not near genes chr2L 4128864 intergenic not near genes chr2L 4128943 intergenic not near genes chr2L_24_4125001 chr2L_4125001 RAL-900_125b 139 chr2L 4150573 4150656 chr2L 4150703 4150771 19 120 5.0 6.0 5.5 2.9 198 chr2L 4150573 exon CG2955 + chr2L 4150672 exon CG2955 + chr2L 4150771 exon CG2955 + chr2L_19_4150001 chr2L_4150001 RAL-900_125b 140 chr2L 4160461 4160526 chr2L 4160922 4160976 16 460 6.0 5.5 5.8 2.4 515 chr2L 4160461 intergenic not near genes chr2L 4160718 intergenic not near genes chr2L 4160976 intergenic not near genes chr2L_16_4160001 chr2L_4160001 RAL-900_125b 141 chr2L 4184425 4184504 chr2L 4184794 4184873 16 368 6.0 8.5 7.2 2.0 448 chr2L 4184425 intergenic not near genes chr2L 4184649 intergenic not near genes chr2L 4184873 intergenic not near genes chr2L_16_4180001 chr2L_4180001 RAL-900_125b 142 chr2L 4211808 4211836 chr2L 4211944 4211944 9 129 5.5 5.5 5.5 1.4 136 chr2L 4211808 intron ft - chr2L 4211876 intron ft - chr2L 4211944 intron ft - chr2L_9_4210001 chr2L_4210001 RAL-900_125b 143 chr2L 4231715 4231785 chr2L 4232064 4232134 37 347 7.0 7.0 7.0 4.6 419 chr2L 4231715 intergenic not near genes chr2L 4231924 intergenic not near genes chr2L 4232134 intergenic not near genes chr2L_37_4230001 chr2L_4230001 RAL-900_125b 144 chr2L 4256531 4256575 chr2L 4256661 4256705 9 130 0.0 10.0 5.0 1.5 174 chr2L 4256531 intergenic CR45295 -,CR45296 -,CR45294 - chr2L 4256618 intergenic CR45295 -,CR45296 - chr2L 4256705 intergenic CR45296 -,CR45295 - chr2L_9_4255001 chr2L_4255001 RAL-900_125b 145 chr2L 4275078 4275100 chr2L 4275212 4275233 14 133 0.0 21.0 10.5 1.2 155 chr2L 4275078 intergenic not near genes chr2L 4275156 intergenic not near genes chr2L 4275233 intergenic not near genes chr2L_14_4275001 chr2L_4275001 RAL-900_125b 146 chr2L 4325630 4325636 chr2L 4325757 4325763 5 127 3.5 4.0 3.8 1.0 133 chr2L 4325630 intron CG16857 + chr2L 4325696 intron CG16857 + chr2L 4325763 intron CG16857 + chr2L_5_4325001 chr2L_4325001 RAL-900_125b 147 chr2L 4351430 4351499 chr2L 4351551 4351625 28 125 6.0 4.5 5.2 4.5 195 chr2L 4351430 5` UTR CR44700 + chr2L 4351528 intergenic CR44700 + chr2L 4351625 intergenic CR44700 + chr2L_28_4350001 chr2L_4350001 RAL-900_125b 148 chr2L 4435037 4435055 chr2L 4435159 4435191 7 133 0.0 8.0 4.0 1.4 154 chr2L 4435037 intron,3` UTR,3` UTR CG15431 -,CG34177 +,CG34178 + chr2L 4435114 intron CG15431 - chr2L 4435191 intron CG15431 - chr2L_7_4435001 chr2L_4435001 RAL-900_125b 149 chr2L 4439379 4439455 chr2L 4439513 4439589 27 133 2.0 4.5 3.2 6.4 210 chr2L 4439379 5` UTR CG15431 - chr2L 4439484 5` UTR CG15431 - chr2L 4439589 intron CG15431 - chr2L_27_4435001 chr2L_4435001 RAL-900_125b 150 chr2L 4601661 4601733 chr2L 4609152 4609221 mdg1 23 7487 7.5 6.5 7.0 2.9 7560 chr2L 4601661 intron dp - chr2L 4605441 intron dp - chr2L 4609221 intron dp - chr2L_23_4605001 chr2L_4605001 RAL-900_125b 151 chr2L 4661794 4661850 chr2L 4669424 4669480 opus 15 7630 7.0 12.5 9.8 1.4 7686 chr2L 4661794 intergenic not near genes chr2L 4665637 intergenic not near genes chr2L 4669480 intergenic not near genes chr2L_15_4665001 chr2L_4665001 RAL-900_125b 152 chr2L 4818892 4818946 chr2L 4819732 4819779 15 836 0.0 2.5 1.2 6.8 887 chr2L 4818892 intergenic not near genes chr2L 4819336 intergenic not near genes chr2L 4819779 intergenic not near genes chr2L_15_4815001 chr2L_4815001 RAL-900_125b 153 chr2L 4826226 4826274 chr2L 4826438 4826486 31 211 10.5 13.5 12.0 2.4 260 chr2L 4826226 intron CG15628 + chr2L 4826356 intron CG15628 + chr2L 4826486 exon CG15628 + chr2L_31_4825001 chr2L_4825001 RAL-900_125b 154 chr2L 4869422 4869494 chr2L 4869552 4869624 27 129 12.0 10.0 11.0 2.2 202 chr2L 4869422 intron pog + chr2L 4869523 intron pog + chr2L 4869624 intron pog + chr2L_27_4865001 chr2L_4865001 RAL-900_125b 155 chr2L 4892888 4892895 chr2L 4893016 4893028 4 132 2.5 4.5 3.5 0.9 140 chr2L 4892888 intron CG3036 + chr2L 4892958 intron CG3036 + chr2L 4893028 intron CG3036 + chr2L_4_4890001 chr2L_4890001 RAL-900_125b 156 chr2L 4918127 4918197 chr2L 4923250 4923358 jockey 23 5159 9.0 0.0 4.5 4.2 5231 chr2L 4918127 intron hoe1 - chr2L 4920742 intron hoe1 - chr2L 4923358 intron hoe1 - chr2L_23_4920001 chr2L_4920001 RAL-900_125b 157 chr2L 4925623 4925695 chr2L 4925752 4925824 17 129 8.5 7.0 7.8 1.9 201 chr2L 4925623 intron hoe1 - chr2L 4925724 intron hoe1 - chr2L 4925824 intron hoe1 - chr2L_17_4925001 chr2L_4925001 RAL-900_125b 158 chr2L 4953471 4953505 chr2L 4953762 4953790 pogo 10 290 15.5 8.5 12.0 0.8 319 chr2L 4953471 intergenic Jon25Bii - chr2L 4953630 intergenic Jon25Bii - chr2L 4953790 intergenic Jon25Bi - chr2L_10_4950001 chr2L_4950001 RAL-900_125b 159 chr2L 5062576 5062590 chr2L 5062718 5062732 9 142 13.0 5.5 9.2 0.9 156 chr2L 5062576 intron qtc + chr2L 5062654 intron,3` UTR qtc +,CR43820 - chr2L 5062732 intron,3` UTR qtc +,CR43820 - chr2L_9_5060001 chr2L_5060001 RAL-900_125b 160 chr2L 5070735 5070775 chr2L 5070863 5070898 17 128 9.5 0.0 4.8 2.9 163 chr2L 5070735 3` UTR qtc + chr2L 5070816 intergenic qtc +,CR45305 -,RpL37A + chr2L 5070898 3` UTR CR45305 - chr2L_17_5070001 chr2L_5070001 RAL-900_125b 161 chr2L 5092361 5092438 chr2L 5092498 5092575 34 136 7.0 6.0 6.5 4.5 214 chr2L 5092361 intron pgant5 - chr2L 5092468 intron pgant5 - chr2L 5092575 intron pgant5 - chr2L_34_5090001 chr2L_5090001 RAL-900_125b 162 chr2L 5117247 5117323 chr2L 5117379 5117455 37 131 7.0 3.5 5.2 6.0 208 chr2L 5117247 intron Msp300 + chr2L 5117351 intron Msp300 + chr2L 5117455 intron Msp300 + chr2L_37_5115001 chr2L_5115001 RAL-900_125b 163 chr2L 5119037 5119040 chr2L 5119175 5119178 4 138 0.0 0.0 0.0 4.0 141 chr2L 5119037 intron Msp300 + chr2L 5119108 intron Msp300 + chr2L 5119178 intron Msp300 + chr2L_4_5115001 chr2L_5115001 RAL-900_125b 164 chr2L 5119041 5119044 chr2L 5119170 5119182 4 136 0.0 0.0 0.0 4.0 141 chr2L 5119041 intron Msp300 + chr2L 5119112 intron Msp300 + chr2L 5119182 intron Msp300 + chr2L_4_5115001 chr2L_5115001 RAL-900_125b 165 chr2L 5120926 5120996 chr2L 5121070 5121140 25 143 8.5 6.0 7.2 3.0 214 chr2L 5120926 intron Msp300 + chr2L 5121033 intron Msp300 + chr2L 5121140 intron Msp300 + chr2L_25_5120001 chr2L_5120001 RAL-900_125b 166 chr2L 5342728 5342792 chr2L 5345158 5345222 Doc 29 2430 8.5 9.5 9.0 2.9 2494 chr2L 5342728 intergenic CG12512 - chr2L 5343975 intergenic not near genes chr2L 5345222 intergenic not near genes chr2L_29_5340001 chr2L_5340001 RAL-900_125b 167 chr2L 5349611 5349675 chr2L 5349818 5349882 30 207 15.0 11.0 13.0 2.1 271 chr2L 5349611 intron nompC + chr2L 5349746 intron nompC + chr2L 5349882 intron nompC + chr2L_30_5345001 chr2L_5345001 RAL-900_125b 168 chr2L 5396359 5396376 chr2L 5396485 5396502 12 126 12.0 5.0 8.5 1.3 143 chr2L 5396359 intergenic not near genes chr2L 5396430 intergenic not near genes chr2L 5396502 intergenic not near genes chr2L_12_5395001 chr2L_5395001 RAL-900_125b 169 chr2L 5494513 5494576 chr2L 5494660 5494706 21 146 13.0 7.0 10.0 1.9 193 chr2L 5494513 intergenic not near genes chr2L 5494610 intergenic not near genes chr2L 5494706 intergenic not near genes chr2L_21_5490001 chr2L_5490001 RAL-900_125b 170 chr2L 5502596 5502601 chr2L 5502726 5502731 6 129 5.5 7.5 6.5 0.8 135 chr2L 5502596 intergenic not near genes chr2L 5502664 intergenic not near genes chr2L 5502731 intergenic not near genes chr2L_6_5500001 chr2L_5500001 RAL-900_125b 171 chr2L 5508480 5508561 chr2L 5508607 5508687 18 126 3.0 8.5 5.8 2.6 207 chr2L 5508480 intergenic not near genes chr2L 5508584 intergenic not near genes chr2L 5508687 intergenic not near genes chr2L_18_5505001 chr2L_5505001 RAL-900_125b 172 chr2L 5589756 5589833 chr2L 5589978 5590024 23 220 4.5 11.5 8.0 2.6 268 chr2L 5589756 intergenic not near genes chr2L 5589890 intergenic not near genes chr2L 5590024 intergenic not near genes chr2L_23_5585001 chr2L_5585001 RAL-900_125b 173 chr2L 5593079 5593153 chr2L 5593235 5593309 34 156 8.0 6.5 7.2 4.1 230 chr2L 5593079 intergenic not near genes chr2L 5593194 intergenic not near genes chr2L 5593309 intergenic not near genes chr2L_34_5590001 chr2L_5590001 RAL-900_125b 174 chr2L 5646650 5646675 chr2L 5646773 5646793 10 123 11.5 12.5 12.0 0.8 143 chr2L 5646650 intron CG31646 - chr2L 5646722 intron CG31646 - chr2L 5646793 intron CG31646 - chr2L_10_5645001 chr2L_5645001 RAL-900_125b 175 chr2L 5666246 5666323 chr2L 5666381 5666463 32 138 7.5 6.0 6.8 4.1 217 chr2L 5666246 intron Hsp60C + chr2L 5666354 intron Hsp60C + chr2L 5666463 intron Hsp60C + chr2L_32_5665001 chr2L_5665001 RAL-900_125b 176 chr2L 5676847 5676921 chr2L 5676987 5677067 20 144 3.5 8.0 5.8 2.9 220 chr2L 5676847 intergenic not near genes chr2L 5676957 intergenic not near genes chr2L 5677067 intergenic not near genes chr2L_20_5675001 chr2L_5675001 RAL-900_125b 177 chr2L 5695813 5695887 chr2L 5695955 5696029 40 142 5.0 4.5 4.8 6.9 216 chr2L 5695813 intergenic not near genes chr2L 5695921 intergenic not near genes chr2L 5696029 intergenic not near genes chr2L_40_5695001 chr2L_5695001 RAL-900_125b 178 chr2L 5764846 5764929 chr2L 5765005 5765087 7 159 0.0 6.5 3.2 1.7 241 chr2L 5764846 intron obst-E - chr2L 5764966 intron obst-E - chr2L 5765087 intron obst-E - chr2L_7_5760001 chr2L_5760001 RAL-900_125b 179 chr2L 5780876 5780930 chr2L 5781025 5781085 26 154 11.5 11.0 11.2 2.1 209 chr2L 5780876 intron CG9171 - chr2L 5780980 intron CG9171 - chr2L 5781085 intron CG9171 - chr2L_26_5780001 chr2L_5780001 RAL-900_125b 180 chr2L 5804220 5804228 chr2L 5804358 5804366 5 138 8.5 0.0 4.2 1.0 146 chr2L 5804220 intergenic CG7239 + chr2L 5804293 intergenic CG7239 + chr2L 5804366 intergenic CG7239 + chr2L_5_5800001 chr2L_5800001 RAL-900_125b 181 chr2L 5805162 5805214 chr2L 5805314 5805366 20 149 12.0 8.5 10.2 1.8 204 chr2L 5805162 intergenic CG11034 + chr2L 5805264 intergenic CG11034 + chr2L 5805366 intergenic CG11034 + chr2L_20_5805001 chr2L_5805001 RAL-900_125b 182 chr2L 5805216 5805238 chr2L 5805306 5805385 5 139 8.0 5.5 6.8 0.6 169 chr2L 5805216 intergenic CG11034 + chr2L 5805300 intergenic CG11034 + chr2L 5805385 intergenic CG11034 + chr2L_5_5805001 chr2L_5805001 RAL-900_125b 183 chr2L 5806199 5806236 chr2L 5806352 5806389 15 153 11.0 11.5 11.2 1.2 190 chr2L 5806199 intron CG11034 + chr2L 5806294 intron CG11034 + chr2L 5806389 intron CG11034 + chr2L_15_5805001 chr2L_5805001 RAL-900_125b 184 chr2L 5819630 5819708 chr2L 5819764 5819797 51 133 6.5 8.5 7.5 6.0 167 chr2L 5819630 intergenic not near genes chr2L 5819714 intergenic not near genes chr2L 5819797 intergenic not near genes chr2L_51_5815001 chr2L_5815001 RAL-900_125b 185 chr2L 5820341 5820416 chr2L 5820547 5820622 19 206 9.0 10.5 9.8 1.8 281 chr2L 5820341 intergenic not near genes chr2L 5820482 intergenic not near genes chr2L 5820622 intergenic not near genes chr2L_19_5820001 chr2L_5820001 RAL-900_125b 186 chr2L 5827670 5827730 chr2L 5836728 5836769 roo 24 9056 7.0 1.5 4.2 4.6 9099 chr2L 5827670 intron TrissinR + chr2L 5832220 intron TrissinR + chr2L 5836769 intron TrissinR + chr2L_24_5830001 chr2L_5830001 RAL-900_125b 187 chr2L 5842254 5842327 chr2L 5842391 5842470 5 136 7.0 0.0 3.5 1.1 216 chr2L 5842254 intron TrissinR + chr2L 5842362 intron TrissinR + chr2L 5842470 intron TrissinR + chr2L_5_5840001 chr2L_5840001 RAL-900_125b 188 chr2L 5851097 5851127 chr2L 5851228 5851258 15 130 6.0 10.0 8.0 1.7 161 chr2L 5851097 intron TrissinR + chr2L 5851178 intron TrissinR + chr2L 5851258 intron TrissinR + chr2L_15_5850001 chr2L_5850001 RAL-900_125b 189 chr2L 5866341 5866397 chr2L 5866486 5866542 18 145 7.0 0.0 3.5 4.0 201 chr2L 5866341 intron rau - chr2L 5866442 intron rau - chr2L 5866542 intron rau - chr2L_18_5865001 chr2L_5865001 RAL-900_125b 190 chr2L 5895902 5895951 chr2L 5896039 5896088 23 137 1.5 5.5 3.5 5.1 186 chr2L 5895902 intergenic not near genes chr2L 5895995 intergenic not near genes chr2L 5896088 intergenic not near genes chr2L_23_5895001 chr2L_5895001 RAL-900_125b 191 chr2L 5904410 5904449 chr2L 5904540 5904579 22 130 11.5 0.0 5.8 3.2 169 chr2L 5904410 exon CG9021 - chr2L 5904494 intron CG9021 - chr2L 5904579 intron CG9021 - chr2L_22_5900001 chr2L_5900001 RAL-900_125b 192 chr2L 5922906 5922913 chr2L 5923013 5923042 4 124 5.5 12.5 9.0 0.4 136 chr2L 5922906 3` UTR CG9016 - chr2L 5922974 3` UTR CG9016 - chr2L 5923042 3` UTR CG9016 - chr2L_4_5920001 chr2L_5920001 RAL-900_125b 193 chr2L 5926275 5926568 chr2L 5926451 5926697 31 159 11.5 0.0 5.8 4.6 422 chr2L 5926275 intron dsf + chr2L 5926486 intron dsf + chr2L 5926697 intron dsf + chr2L_31_5925001 chr2L_5925001 RAL-900_125b 194 chr2L 5926576 5926612 chr2L 5926705 5926741 18 129 11.5 0.0 5.8 2.6 165 chr2L 5926576 intron dsf + chr2L 5926658 intron dsf + chr2L 5926741 intron dsf + chr2L_18_5925001 chr2L_5925001 RAL-900_125b 195 chr2L 5931266 5931518 chr2L 5931428 5931677 30 160 2.5 2.5 2.5 8.6 411 chr2L 5931266 intron dsf + chr2L 5931472 intron dsf + chr2L 5931677 intron dsf + chr2L_30_5930001 chr2L_5930001 RAL-900_125b 196 chr2L 5946663 5946725 chr2L 5946796 5946858 22 130 8.5 5.5 7.0 2.8 195 chr2L 5946663 exon Gpdh + chr2L 5946760 intron Gpdh + chr2L 5946858 intron Gpdh + chr2L_22_5945001 chr2L_5945001 RAL-900_125b 197 chr2L 5961316 5961325 chr2L 5961463 5961472 5 147 18.0 8.0 13.0 0.4 156 chr2L 5961316 intergenic not near genes chr2L 5961394 intergenic not near genes chr2L 5961472 intergenic not near genes chr2L_5_5960001 chr2L_5960001 RAL-900_125b 198 chr2L 5961332 5961343 chr2L 5961453 5961489 4 140 16.0 5.5 10.8 0.3 157 chr2L 5961332 intergenic not near genes chr2L 5961410 intergenic not near genes chr2L 5961489 intergenic not near genes chr2L_4_5960001 chr2L_5960001 RAL-900_125b 199 chr2L 5961344 5961384 chr2L 5961451 5961531 19 133 6.5 5.5 6.0 2.7 187 chr2L 5961344 intergenic not near genes chr2L 5961438 intergenic not near genes chr2L 5961531 intergenic not near genes chr2L_19_5960001 chr2L_5960001 RAL-900_125b 200 chr2L 5962225 5962299 chr2L 5962351 5962425 30 126 12.0 10.5 11.2 2.5 200 chr2L 5962225 intergenic not near genes chr2L 5962325 intergenic not near genes chr2L 5962425 intergenic not near genes chr2L_30_5960001 chr2L_5960001 RAL-900_125b 201 chr2L 6002401 6002426 chr2L 6002537 6002562 14 136 20.0 13.0 16.5 0.8 161 chr2L 6002401 3` UTR Tsp26A + chr2L 6002482 3` UTR Tsp26A + chr2L 6002562 3` UTR Tsp26A + chr2L_14_6000001 chr2L_6000001 RAL-900_125b 202 chr2L 6002430 6002442 chr2L 6002536 6002578 7 132 16.0 12.0 14.0 0.5 148 chr2L 6002430 3` UTR Tsp26A + chr2L 6002504 3` UTR Tsp26A + chr2L 6002578 3` UTR Tsp26A + chr2L_7_6000001 chr2L_6000001 RAL-900_125b 203 chr2L 6002443 6002462 chr2L 6002527 6002598 14 132 12.0 9.0 10.5 1.2 155 chr2L 6002443 3` UTR Tsp26A + chr2L 6002520 3` UTR Tsp26A + chr2L 6002598 3` UTR Tsp26A + chr2L_14_6000001 chr2L_6000001 RAL-900_125b 204 chr2L 6050393 6050465 chr2L 6050547 6050619 21 154 8.0 9.5 8.8 2.1 226 chr2L 6050393 3` UTR CG12393 + chr2L 6050506 intergenic CG12393 +,CG9135 + chr2L 6050619 intergenic CG12393 +,CG9135 + chr2L_21_6050001 chr2L_6050001 RAL-900_125b 205 chr2L 6075036 6075057 chr2L 6075178 6075199 13 142 10.0 0.0 5.0 2.2 163 chr2L 6075036 intergenic CR43801 - chr2L 6075118 intergenic CR43801 - chr2L 6075199 intergenic CR43801 - chr2L_13_6075001 chr2L_6075001 RAL-900_125b 206 chr2L 6130719 6130777 chr2L 6130854 6130911 24 133 10.5 0.0 5.2 3.9 192 chr2L 6130719 intergenic CG42730 -,tectonic -,CG9222 + chr2L 6130815 intergenic CG42730 -,tectonic -,CG9222 + chr2L 6130911 intergenic CG9222 +,CG42730 -,tectonic - chr2L_24_6130001 chr2L_6130001 RAL-900_125b 207 chr2L 6185393 6185466 chr2L 6185521 6185566 26 124 10.5 13.0 11.8 2.0 173 chr2L 6185393 intron CG34380 + chr2L 6185480 intron CG34380 + chr2L 6185566 intron CG34380 + chr2L_26_6185001 chr2L_6185001 RAL-900_125b 208 chr2L 6283892 6283978 chr2L 6284054 6284141 21 161 2.5 0.0 1.2 9.5 249 chr2L 6283892 intron Ddr + chr2L 6284016 intron Ddr + chr2L 6284141 intron Ddr + chr2L_21_6280001 chr2L_6280001 RAL-900_125b 209 chr2L 6296373 6296430 chr2L 6296501 6296573 34 142 11.5 8.0 9.8 3.1 200 chr2L 6296373 intron Ddr + chr2L 6296473 intron Ddr + chr2L 6296573 intron Ddr + chr2L_34_6295001 chr2L_6295001 RAL-900_125b 210 chr2L 6312355 6312364 chr2L 6312482 6312491 7 127 0.0 22.5 11.2 0.6 136 chr2L 6312355 intron Ddr + chr2L 6312423 intron Ddr + chr2L 6312491 intron Ddr + chr2L_7_6310001 chr2L_6310001 RAL-900_125b 211 chr2L 6316291 6316318 chr2L 6316429 6316456 20 138 0.0 11.5 5.8 2.9 165 chr2L 6316291 intron Ddr + chr2L 6316374 intron Ddr + chr2L 6316456 intron Ddr + chr2L_20_6315001 chr2L_6315001 RAL-900_125b 212 chr2L 6318708 6318759 chr2L 6318912 6318963 28 203 6.5 10.5 8.5 2.9 255 chr2L 6318708 intron Ddr + chr2L 6318836 intron Ddr + chr2L 6318963 intron Ddr + chr2L_28_6315001 chr2L_6315001 RAL-900_125b 213 chr2L 6349029 6349076 chr2L 6349157 6349204 19 128 7.5 6.5 7.0 2.4 175 chr2L 6349029 intergenic CG9498 - chr2L 6349116 intergenic CG9498 - chr2L 6349204 intergenic CG9498 - chr2L_19_6345001 chr2L_6345001 RAL-900_125b 214 chr2L 6363108 6363125 chr2L 6366080 6366097 Burdock 9 2971 26.5 6.5 16.5 0.5 2989 chr2L 6363108 intergenic not near genes chr2L 6364602 intergenic not near genes chr2L 6366097 intergenic not near genes chr2L_9_6360001 chr2L_6360001 RAL-900_125b 215 chr2L 6363128 6363181 chr2L 6366074 6366118 Burdock 20 2968 12.0 5.0 8.5 2.1 2990 chr2L 6363128 intergenic not near genes chr2L 6364623 intergenic not near genes chr2L 6366118 intergenic not near genes chr2L_20_6360001 chr2L_6360001 RAL-900_125b 216 chr2L 6390071 6390131 chr2L 6390204 6390261 8 130 9.5 0.0 4.8 1.4 190 chr2L 6390071 intron CG42368 - chr2L 6390166 intron CG42368 - chr2L 6390261 intron CG42368 - chr2L_8_6390001 chr2L_6390001 RAL-900_125b 217 chr2L 6426818 6426878 chr2L 6445128 6445188 roo 26 18308 9.5 12.0 10.8 2.2 18370 chr2L 6426818 3` UTR CG9527 - chr2L 6436003 intron CG9527 - chr2L 6445188 exon CG9527 - chr2L_26_6435001 chr2L_6435001 RAL-900_125b 218 chr2L 6537094 6537164 chr2L 6537222 6537292 20 128 8.0 8.5 8.2 2.2 198 chr2L 6537094 intron eya - chr2L 6537193 intron eya - chr2L 6537292 intron eya - chr2L_20_6535001 chr2L_6535001 RAL-900_125b 219 chr2L 6564799 6564876 chr2L 6564942 6565006 17 139 7.0 6.5 6.8 2.2 207 chr2L 6564799 3` UTR CG13766 - chr2L 6564902 3` UTR CG13766 - chr2L 6565006 3` UTR CG13766 - chr2L_17_6560001 chr2L_6560001 RAL-900_125b 220 chr2L 6590059 6590124 chr2L 6590187 6590238 18 123 8.0 0.5 4.2 3.5 179 chr2L 6590059 intron CG11319 - chr2L 6590148 intron CG11319 - chr2L 6590238 intron CG11319 - chr2L_18_6590001 chr2L_6590001 RAL-900_125b 221 chr2L 6744521 6744585 chr2L 6744657 6744721 23 136 0.0 9.0 4.5 4.2 200 chr2L 6744521 intron CG11221 + chr2L 6744621 intron CG11221 + chr2L 6744721 intron,exon CG11221 +,CG31910 - chr2L_23_6740001 chr2L_6740001 RAL-900_125b 222 chr2L 6746047 6746118 chr2L 6746173 6746244 38 123 5.5 8.0 6.8 4.9 197 chr2L 6746047 intron CG11221 + chr2L 6746146 intron CG11221 + chr2L 6746244 intron CG11221 + chr2L_38_6745001 chr2L_6745001 RAL-900_125b 223 chr2L 6772000 6772078 chr2L 6772130 6772152 20 122 12.0 7.5 9.8 1.9 152 chr2L 6772000 intron CG11321 - chr2L 6772076 intron CG11321 - chr2L 6772152 intron CG11321 - chr2L_20_6770001 chr2L_6770001 RAL-900_125b 224 chr2L 6772548 6772563 chr2L 6772679 6772691 6 130 21.5 17.5 19.5 0.3 143 chr2L 6772548 intron CG11321 - chr2L 6772620 5` UTR CG11321 - chr2L 6772691 5` UTR CG11321 - chr2L_6_6770001 chr2L_6770001 RAL-900_125b 225 chr2L 6772574 6772588 chr2L 6772676 6772712 7 115 16.0 17.5 16.8 0.4 138 chr2L 6772574 5` UTR CG11321 - chr2L 6772643 5` UTR CG11321 - chr2L 6772712 5` UTR CG11321 - chr2L_7_6770001 chr2L_6770001 RAL-900_125b 226 chr2L 6798947 6798951 chr2L 19299025 19299029 4 12500078 38.0 7.5 22.8 0.2 12500082 chr2L 6798947 intergenic nrv2 -,CR43610 + chr2L 13048988 intron CG9932 - chr2L 19299029 exon CG17564 - chr2L_4_13045001 chr2L_13045001 RAL-900_125b 227 chr2L 6804229 6804294 chr2L 6804357 6804422 27 128 6.5 7.5 7.0 3.4 193 chr2L 6804229 exon CG11236 + chr2L 6804326 3` UTR,3` UTR CG11236 +,CG17375 - chr2L 6804422 3` UTR CG17375 - chr2L_27_6800001 chr2L_6800001 RAL-900_125b 228 chr2L 6876746 6876805 chr2L 6882981 6882988 diver 25 6227 14.5 12.5 13.5 1.7 6242 chr2L 6876746 intron Nlg2 + chr2L 6879867 intron Nlg2 + chr2L 6882988 intron Nlg2 + chr2L_25_6875001 chr2L_6875001 RAL-900_125b 229 chr2L 6887447 6887528 chr2L 6887647 6887730 14 202 6.5 3.0 4.8 2.4 283 chr2L 6887447 intron Nlg2 + chr2L 6887588 intron Nlg2 + chr2L 6887730 intron Nlg2 + chr2L_14_6885001 chr2L_6885001 RAL-900_125b 230 chr2L 6888818 6888840 chr2L 6888953 6888975 9 135 6.0 8.0 7.0 1.1 157 chr2L 6888818 intron Nlg2 + chr2L 6888896 intron Nlg2 + chr2L 6888975 intron Nlg2 + chr2L_9_6885001 chr2L_6885001 RAL-900_125b 231 chr2L 6891404 6891465 chr2L 6891552 6891613 34 147 9.5 11.5 10.5 3.0 209 chr2L 6891404 intron Nlg2 + chr2L 6891508 intron Nlg2 + chr2L 6891613 intron Nlg2 + chr2L_34_6890001 chr2L_6890001 RAL-900_125b 232 chr2L 6986133 6986206 chr2L 6986286 6986359 41 151 5.0 9.5 7.2 5.0 226 chr2L 6986133 intron,5` UTR uif -,CR44326 + chr2L 6986246 intron,5` UTR uif -,CR44326 + chr2L 6986359 intron,5` UTR uif -,CR44326 + chr2L_41_6985001 chr2L_6985001 RAL-900_125b 233 chr2L 6991387 6991436 chr2L 6998556 6998605 HMS-Beagle 13 7165 8.5 6.5 7.5 1.5 7218 chr2L 6991387 intron uif - chr2L 6994996 intron uif - chr2L 6998605 intron uif - chr2L_13_6990001 chr2L_6990001 RAL-900_125b 234 chr2L 7089827 7089899 chr2L 7089990 7090062 29 150 11.5 7.0 9.2 2.8 235 chr2L 7089827 intergenic not near genes chr2L 7089944 intergenic not near genes chr2L 7090062 intergenic not near genes chr2L_29_7085001 chr2L_7085001 RAL-900_125b 235 chr2L 7126719 7126849 chr2L 7126850 7126978 16 131 0.0 0.0 0.0 16.0 259 chr2L 7126719 intron Pvf3 - chr2L 7126848 intron Pvf3 - chr2L 7126978 intron Pvf3 - chr2L_16_7125001 chr2L_7125001 RAL-900_125b 236 chr2L 7132189 7132242 chr2L 7132330 7132392 17 145 8.0 0.0 4.0 3.4 203 chr2L 7132189 intron Pvf3 - chr2L 7132290 intron Pvf3 - chr2L 7132392 intron Pvf3 - chr2L_17_7130001 chr2L_7130001 RAL-900_125b 237 chr2L 7159692 7159723 chr2L 7159842 7159873 7 150 9.5 16.0 12.8 0.5 181 chr2L 7159692 intergenic not near genes chr2L 7159782 intergenic not near genes chr2L 7159873 intergenic not near genes chr2L_7_7155001 chr2L_7155001 RAL-900_125b 238 chr2L 7246504 7246564 chr2L 7247413 7247473 14 909 1.0 5.5 3.2 3.3 969 chr2L 7246504 intron Ndae1 - chr2L 7246988 intron Ndae1 - chr2L 7247473 intron Ndae1 - chr2L_14_7245001 chr2L_7245001 RAL-900_125b 239 chr2L 7268407 7268473 chr2L 7268537 7268603 19 130 0.0 6.5 3.2 4.5 196 chr2L 7268407 intron Wnt4 - chr2L 7268505 intron Wnt4 - chr2L 7268603 intron Wnt4 - chr2L_19_7265001 chr2L_7265001 RAL-900_125b 240 chr2L 7295971 7296021 chr2L 7296161 7296211 15 190 9.0 14.0 11.5 1.2 240 chr2L 7295971 intergenic not near genes chr2L 7296091 intergenic not near genes chr2L 7296211 intergenic not near genes chr2L_15_7295001 chr2L_7295001 RAL-900_125b 241 chr2L 7335161 7335232 chr2L 7335308 7335379 27 147 6.0 6.0 6.0 3.9 218 chr2L 7335161 intron Wnt6 + chr2L 7335270 intron Wnt6 + chr2L 7335379 intron Wnt6 + chr2L_27_7335001 chr2L_7335001 RAL-900_125b 242 chr2L 7340039 7340049 chr2L 7340168 7340178 9 129 0.0 18.5 9.2 0.9 139 chr2L 7340039 intron Wnt6 + chr2L 7340108 intron Wnt6 + chr2L 7340178 intron Wnt6 + chr2L_9_7340001 chr2L_7340001 RAL-900_125b 243 chr2L 7343302 7343347 chr2L 7350450 7350501 roo 14 7159 7.5 5.0 6.2 1.9 7199 chr2L 7343302 intron Wnt6 + chr2L 7346902 intron Wnt6 + chr2L 7350501 intron Wnt6 + chr2L_14_7345001 chr2L_7345001 RAL-900_125b 244 chr2L 7377840 7377902 chr2L 7377987 7378049 18 147 0.0 8.0 4.0 3.6 209 chr2L 7377840 5` UTR ninaC + chr2L 7377944 intron ninaC + chr2L 7378049 intron ninaC + chr2L_18_7375001 chr2L_7375001 RAL-900_125b 245 chr2L 7401269 7401330 chr2L 7401481 7401542 22 210 9.0 11.5 10.2 2.0 273 chr2L 7401269 intergenic CG5171 + chr2L 7401406 5` UTR CG5171 + chr2L 7401542 intron CG5171 + chr2L_22_7400001 chr2L_7400001 RAL-900_125b 246 chr2L 7406962 7406966 chr2L 7407092 7407096 6 130 0.0 6.5 3.2 1.4 134 chr2L 7406962 intron CG5177 + chr2L 7407029 intron CG5177 + chr2L 7407096 intron CG5177 + chr2L_6_7405001 chr2L_7405001 RAL-900_125b 247 chr2L 7447744 7447816 chr2L 7447889 7447961 34 144 7.0 9.5 8.2 3.7 217 chr2L 7447744 5` UTR santa-maria - chr2L 7447852 5` UTR santa-maria - chr2L 7447961 5` UTR santa-maria - chr2L_34_7445001 chr2L_7445001 RAL-900_125b 248 chr2L 5904539 5904540 chr2L 7466148 7466149 7 1561609 1.5 35.5 18.5 0.4 1561610 chr2L 5904539 intron CG9021 - chr2L 6685344 exon CG11327 - chr2L 7466149 intergenic CG6055 + chr2L_7_6685001 chr2L_6685001 RAL-900_125b 249 chr2L 5904541 5904541 chr2L 7466150 7466150 6 1561609 2.0 35.5 18.8 0.3 1561609 chr2L 5904541 intron CG9021 - chr2L 6685346 exon CG11327 - chr2L 7466150 intergenic CG6055 + chr2L_6_6685001 chr2L_6685001 RAL-900_125b 250 chr2L 7489656 7489718 chr2L 7489795 7489857 22 138 9.0 11.5 10.2 2.0 201 chr2L 7489656 intron Ziz - chr2L 7489756 intron Ziz - chr2L 7489857 intron Ziz - chr2L_22_7485001 chr2L_7485001 RAL-900_125b 251 chr2L 7502705 7502708 chr2L 7502813 7502834 5 122 19.5 8.0 13.8 0.3 129 chr2L 7502705 intron RapGAP1 - chr2L 7502770 intron RapGAP1 - chr2L 7502834 intron RapGAP1 - chr2L_5_7500001 chr2L_7500001 RAL-900_125b 252 chr2L 7526049 7526119 chr2L 7526187 7526257 21 138 8.5 5.0 6.8 2.7 208 chr2L 7526049 intron RapGAP1 - chr2L 7526153 intron RapGAP1 - chr2L 7526257 intron RapGAP1 - chr2L_21_7525001 chr2L_7525001 RAL-900_125b 253 chr2L 7533967 7533975 chr2L 7534079 7534095 4 118 15.5 8.5 12.0 0.3 128 chr2L 7533967 intron RapGAP1 - chr2L 7534031 intron RapGAP1 - chr2L 7534095 intron RapGAP1 - chr2L_4_7530001 chr2L_7530001 RAL-900_125b 254 chr2L 7548066 7548103 chr2L 7550554 7550593 Burdock 19 2488 10.5 17.5 14.0 1.3 2527 chr2L 7548066 intron RapGAP1 - chr2L 7549330 intron RapGAP1 - chr2L 7550593 intron RapGAP1 - chr2L_19_7545001 chr2L_7545001 RAL-900_125b 255 chr2L 7567477 7567533 chr2L 7567615 7567626 15 130 6.5 9.5 8.0 1.7 149 chr2L 7567477 intron RapGAP1 - chr2L 7567552 intron RapGAP1 - chr2L 7567626 intron RapGAP1 - chr2L_15_7565001 chr2L_7565001 RAL-900_125b 256 chr2L 7579153 7579198 chr2L 7579394 7579429 BS 16 240 11.0 0.0 5.5 2.5 276 chr2L 7579153 intergenic RapGAP1 - chr2L 7579291 intergenic RapGAP1 - chr2L 7579429 intergenic RapGAP1 - chr2L_16_7575001 chr2L_7575001 RAL-900_125b 257 chr2L 7585458 7585501 chr2L 7585607 7585650 8 149 5.0 4.0 4.5 1.5 192 chr2L 7585458 intergenic not near genes chr2L 7585554 intergenic not near genes chr2L 7585650 intergenic not near genes chr2L_8_7585001 chr2L_7585001 RAL-900_125b 258 chr2L 7609486 7609739 chr2L 7609631 7609866 49 138 13.0 9.5 11.2 4.0 380 chr2L 7609486 intron CG6739 + chr2L 7609676 intron CG6739 + chr2L 7609866 intron CG6739 + chr2L_49_7605001 chr2L_7605001 RAL-900_125b 259 chr2L 7702488 7702566 chr2L 7702630 7702708 32 141 6.5 8.0 7.2 3.9 220 chr2L 7702488 intergenic Tep3 + chr2L 7702598 intergenic Tep3 + chr2L 7702708 intergenic Tep3 + chr2L_32_7700001 chr2L_7700001 RAL-900_125b 260 chr2L 7742483 7742562 chr2L 7742613 7742692 30 129 7.5 8.5 8.0 3.3 209 chr2L 7742483 intergenic not near genes chr2L 7742588 intergenic not near genes chr2L 7742692 intergenic not near genes chr2L_30_7740001 chr2L_7740001 RAL-900_125b 261 chr2L 7766581 7766650 chr2L 7766707 7766776 15 123 7.5 5.0 6.2 2.1 195 chr2L 7766581 intergenic not near genes chr2L 7766678 intergenic not near genes chr2L 7766776 intergenic not near genes chr2L_15_7765001 chr2L_7765001 RAL-900_125b 262 chr2L 7770560 7770585 chr2L 7770731 7770756 9 171 7.0 3.5 5.2 1.5 196 chr2L 7770560 intron CG7191 + chr2L 7770658 intron CG7191 + chr2L 7770756 intron CG7191 + chr2L_9_7770001 chr2L_7770001 RAL-900_125b 263 chr2L 7778853 7778873 chr2L 7779018 7779028 12 163 9.5 0.0 4.8 2.1 175 chr2L 7778853 intergenic not near genes chr2L 7778940 intergenic not near genes chr2L 7779028 intergenic not near genes chr2L_12_7775001 chr2L_7775001 RAL-900_125b 264 chr2L 7867524 7867593 chr2L 7867668 7867737 33 144 13.5 11.0 12.2 2.5 213 chr2L 7867524 intron Proc - chr2L 7867630 intron Proc - chr2L 7867737 intron Proc - chr2L_33_7865001 chr2L_7865001 RAL-900_125b 265 chr2L 7922704 7922767 chr2L 7922835 7922898 37 131 12.5 12.0 12.2 2.8 194 chr2L 7922704 intron Snoo - chr2L 7922801 intron Snoo - chr2L 7922898 intron Snoo - chr2L_37_7920001 chr2L_7920001 RAL-900_125b 266 chr2L 7941165 7941195 chr2L 7941278 7941324 12 117 12.0 10.0 11.0 1.0 159 chr2L 7941165 intron Snoo - chr2L 7941244 intron Snoo - chr2L 7941324 intron Snoo - chr2L_12_7940001 chr2L_7940001 RAL-900_125b 267 chr2L 7958997 7959072 chr2L 7960458 7960535 pogo 25 1461 4.5 4.5 4.5 4.5 1538 chr2L 7958997 intron Snoo - chr2L 7959766 intron Snoo - chr2L 7960535 intron Snoo - chr2L_25_7955001 chr2L_7955001 RAL-900_125b 268 chr2L 7965528 7965571 chr2L 7965656 7965702 22 129 9.5 8.5 9.0 2.2 174 chr2L 7965528 intron Snoo - chr2L 7965615 intron Snoo - chr2L 7965702 intron Snoo - chr2L_22_7965001 chr2L_7965001 RAL-900_125b 269 chr2L 7977044 7977111 chr2L 7984069 7984111 297 19 7020 6.5 11.0 8.8 1.9 7067 chr2L 7977044 intron Snoo - chr2L 7980578 intron Snoo - chr2L 7984111 intron,5` UTR Snoo -,CG7231 + chr2L_19_7980001 chr2L_7980001 RAL-900_125b 270 chr2L 7986879 7986915 chr2L 7987015 7987052 5 136 5.5 22.0 13.8 0.3 173 chr2L 7986879 3` UTR pes - chr2L 7986966 3` UTR pes - chr2L 7987052 3` UTR pes - chr2L_5_7985001 chr2L_7985001 RAL-900_125b 271 chr2L 8002989 8003068 chr2L 8003121 8003200 22 132 11.0 11.5 11.2 1.8 211 chr2L 8002989 intron Wwox - chr2L 8003094 intron Wwox - chr2L 8003200 intron Wwox - chr2L_22_8000001 chr2L_8000001 RAL-900_125b 272 chr2L 8013575 8013584 chr2L 8018829 8018838 copia 6 5254 31.0 0.0 15.5 0.4 5263 chr2L 8013575 intron Tg + chr2L 8016206 intron Tg + chr2L 8018838 intron Tg + chr2L_6_8015001 chr2L_8015001 RAL-900_125b 273 chr2L 8013611 8013646 chr2L 8023596 8023631 copia 20 9985 9.5 10.0 9.8 1.9 10020 chr2L 8013611 intron Tg + chr2L 8018621 intron Tg + chr2L 8023631 intron Tg + chr2L_20_8015001 chr2L_8015001 RAL-900_125b 274 chr2L 8018815 8018819 chr2L 8023649 8023653 Doc 5 4834 0.0 18.5 9.2 0.5 4838 chr2L 8018815 intron Tg + chr2L 8021234 intron Tg + chr2L 8023653 intron Tg + chr2L_5_8020001 chr2L_8020001 RAL-900_125b 275 chr2L 8018820 8018833 chr2L 8023598 8023667 Doc 4 4820 0.0 10.5 5.2 0.6 4847 chr2L 8018820 intron Tg + chr2L 8021244 intron Tg + chr2L 8023667 intron Tg + chr2L_4_8020001 chr2L_8020001 RAL-900_125b 276 chr2L 8034558 8034579 chr2L 8034709 8034730 12 150 13.0 15.5 14.2 0.8 172 chr2L 8034558 intron,intron CG7367 -,Cka + chr2L 8034644 intron,intron CG7367 -,Cka + chr2L 8034730 intron,intron CG7367 -,Cka + chr2L_12_8030001 chr2L_8030001 RAL-900_125b 277 chr2L 8044051 8044129 chr2L 8044180 8044258 30 128 11.5 10.5 11.0 2.5 207 chr2L 8044051 exon CG7466 + chr2L 8044154 intron CG7466 + chr2L 8044258 intron CG7466 + chr2L_30_8040001 chr2L_8040001 RAL-900_125b 278 chr2L 8108865 8108927 chr2L 8109011 8109073 30 146 10.5 5.5 8.0 3.3 208 chr2L 8108865 3` UTR Bsg + chr2L 8108969 3` UTR Bsg + chr2L 8109073 3` UTR Bsg + chr2L_30_8105001 chr2L_8105001 RAL-900_125b 279 chr2L 8167106 8167174 chr2L 8167247 8167272 32 136 8.5 13.0 10.8 2.7 166 chr2L 8167106 intron Piezo + chr2L 8167189 intron Piezo + chr2L 8167272 intron Piezo + chr2L_32_8165001 chr2L_8165001 RAL-900_125b 280 chr2L 8185443 8185515 chr2L 8185581 8185654 8 139 0.0 9.5 4.8 1.4 211 chr2L 8185443 intron Piezo + chr2L 8185548 intron Piezo + chr2L 8185654 intron Piezo + chr2L_8_8185001 chr2L_8185001 RAL-900_125b 281 chr2L 8230268 8230342 chr2L 8230402 8230472 35 134 8.5 7.5 8.0 3.9 204 chr2L 8230268 5` UTR Pvr - chr2L 8230370 intron Pvr - chr2L 8230472 intron Pvr - chr2L_35_8230001 chr2L_8230001 RAL-900_125b 282 chr2L 8239688 8239766 chr2L 8239817 8239840 26 123 7.5 14.0 10.8 2.2 152 chr2L 8239688 intron Pvr - chr2L 8239764 5` UTR Pvr - chr2L 8239840 5` UTR Pvr - chr2L_26_8235001 chr2L_8235001 RAL-900_125b 283 chr2L 8244681 8244748 chr2L 8244853 8244920 29 171 3.0 8.0 5.5 4.5 239 chr2L 8244681 intron CG8086 - chr2L 8244800 intron CG8086 - chr2L 8244920 intron CG8086 - chr2L_29_8240001 chr2L_8240001 RAL-900_125b 284 chr2L 8286251 8286323 chr2L 8286387 8286455 26 135 6.5 10.5 8.5 2.7 204 chr2L 8286251 intron Btk29A - chr2L 8286353 intron Btk29A - chr2L 8286455 intron Btk29A - chr2L_26_8285001 chr2L_8285001 RAL-900_125b 285 chr2L 8452389 8452438 chr2L 8461600 8461659 roo 21 9220 11.5 11.5 11.5 1.7 9270 chr2L 8452389 intron fu12 - chr2L 8457024 intron fu12 - chr2L 8461659 intron fu12 - chr2L_21_8455001 chr2L_8455001 RAL-900_125b 286 chr2L 8538119 8538191 chr2L 8538245 8538327 10 130 9.5 1.5 5.5 1.5 208 chr2L 8538119 intron CG17834 + chr2L 8538223 intron CG17834 + chr2L 8538327 intron CG17834 + chr2L_10_8535001 chr2L_8535001 RAL-900_125b 287 chr2L 8594424 8594489 chr2L 8601528 8601593 297 24 7104 12.5 10.5 11.5 1.9 7169 chr2L 8594424 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598008 intron Sema-1a + chr2L 8601593 intron Sema-1a + chr2L_24_8595001 chr2L_8595001 RAL-900_125b 288 chr2L 8612805 8612869 chr2L 8612932 8612996 23 127 13.5 13.5 13.5 1.6 191 chr2L 8612805 intron Sema-1a + chr2L 8612900 intron Sema-1a + chr2L 8612996 intron Sema-1a + chr2L_23_8610001 chr2L_8610001 RAL-900_125b 289 chr2L 8616600 8616645 chr2L 8616800 8616845 15 200 11.0 0.0 5.5 2.3 245 chr2L 8616600 intron Sema-1a + chr2L 8616722 intron Sema-1a + chr2L 8616845 intron Sema-1a + chr2L_15_8615001 chr2L_8615001 RAL-900_125b 290 chr2L 8687035 8687093 chr2L 8687189 8687247 15 154 8.0 9.0 8.5 1.6 212 chr2L 8687035 3` UTR Trs23 + chr2L 8687141 intergenic Hnf4 -,Trs23 + chr2L 8687247 3` UTR Hnf4 - chr2L_15_8685001 chr2L_8685001 RAL-900_125b 291 chr2L 8719153 8719233 chr2L 8719279 8719359 25 124 7.0 7.5 7.2 3.0 206 chr2L 8719153 intron raw - chr2L 8719256 intron raw - chr2L 8719359 intron raw - chr2L_25_8715001 chr2L_8715001 RAL-900_125b 292 chr2L 8723071 8723094 chr2L 8731498 8731521 Tirant 9 8426 21.0 9.0 15.0 0.6 8450 chr2L 8723071 intron raw - chr2L 8727296 intron raw - chr2L 8731521 intron raw - chr2L_9_8725001 chr2L_8725001 RAL-900_125b 293 chr2L 8723096 8723140 chr2L 8731493 8731567 Tirant 22 8426 10.5 7.5 9.0 2.2 8471 chr2L 8723096 intron raw - chr2L 8727332 intron raw - chr2L 8731567 intron raw - chr2L_22_8725001 chr2L_8725001 RAL-900_125b 294 chr2L 8736221 8736257 chr2L 8736351 8736387 17 130 0.0 9.5 4.8 2.9 166 chr2L 8736221 intron raw - chr2L 8736304 intron raw - chr2L 8736387 intron raw - chr2L_17_8735001 chr2L_8735001 RAL-900_125b 295 chr2L 8784653 8784724 chr2L 8784814 8784885 30 161 9.5 7.5 8.5 3.2 232 chr2L 8784653 intergenic not near genes chr2L 8784769 intergenic not near genes chr2L 8784885 intergenic not near genes chr2L_30_8780001 chr2L_8780001 RAL-900_125b 296 chr2L 8799754 8799827 chr2L 8799915 8799988 22 165 8.5 6.0 7.2 2.7 234 chr2L 8799754 intergenic not near genes chr2L 8799871 intergenic not near genes chr2L 8799988 intergenic not near genes chr2L_22_8795001 chr2L_8795001 RAL-900_125b 297 chr2L 8803129 8803199 chr2L 8803267 8803338 23 135 5.0 6.5 5.8 3.4 209 chr2L 8803129 intergenic not near genes chr2L 8803234 intergenic not near genes chr2L 8803338 intergenic not near genes chr2L_23_8800001 chr2L_8800001 RAL-900_125b 298 chr2L 8815351 8815423 chr2L 8815767 8815823 35 411 10.5 8.0 9.2 3.4 472 chr2L 8815351 intergenic not near genes chr2L 8815587 intergenic not near genes chr2L 8815823 intergenic not near genes chr2L_35_8815001 chr2L_8815001 RAL-900_125b 299 chr2L 8976193 8976251 chr2L 8976329 8976393 18 140 0.0 7.0 3.5 4.0 200 chr2L 8976193 intergenic not near genes chr2L 8976293 intergenic not near genes chr2L 8976393 intergenic not near genes chr2L_18_8975001 chr2L_8975001 RAL-900_125b 300 chr2L 9000237 9000312 chr2L 9007797 9007898 roo 26 7564 8.0 0.5 4.2 5.0 7661 chr2L 9000237 intergenic Try29F + chr2L 9004068 intergenic not near genes chr2L 9007898 intergenic not near genes chr2L_26_9000001 chr2L_9000001 RAL-900_125b 301 chr2L 9023116 9023177 chr2L 9023263 9023324 28 144 10.0 7.5 8.8 2.9 208 chr2L 9023116 intergenic not near genes chr2L 9023220 intergenic not near genes chr2L 9023324 intergenic not near genes chr2L_28_9020001 chr2L_9020001 RAL-900_125b 302 chr2L 9027937 9027978 chr2L 9028071 9028112 12 134 9.5 0.0 4.8 2.1 175 chr2L 9027937 intron,intron CG9582 -,CR44352 - chr2L 9028024 intron,intron CG9582 -,CR44352 - chr2L 9028112 intron,intron CG9582 -,CR44352 - chr2L_12_9025001 chr2L_9025001 RAL-900_125b 303 chr2L 9039980 9040055 chr2L 9040117 9040192 29 137 8.0 10.5 9.2 2.8 212 chr2L 9039980 intergenic not near genes chr2L 9040086 intergenic not near genes chr2L 9040192 intergenic not near genes chr2L_29_9040001 chr2L_9040001 RAL-900_125b 304 chr2L 9044056 9044126 chr2L 9044204 9044283 22 148 5.5 5.5 5.5 3.4 227 chr2L 9044056 intergenic not near genes chr2L 9044170 intergenic not near genes chr2L 9044283 intergenic not near genes chr2L_22_9040001 chr2L_9040001 RAL-900_125b 305 chr2L 9053365 9053412 chr2L 9053650 9053697 22 285 11.0 6.0 8.5 2.3 332 chr2L 9053365 exon CG31708 - chr2L 9053531 intron CG31708 - chr2L 9053697 intron CG31708 - chr2L_22_9050001 chr2L_9050001 RAL-900_125b 306 chr2L 9069633 9069648 chr2L 9069774 9069789 7 141 0.0 2.0 1.0 3.5 156 chr2L 9069633 intron CG31708 - chr2L 9069711 intron CG31708 - chr2L 9069789 intron CG31708 - chr2L_7_9065001 chr2L_9065001 RAL-900_125b 307 chr2L 9084337 9084340 chr2L 16217660 16217660 9 7133321 28.5 33.5 31.0 0.3 7133323 chr2L 9084337 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_9_12650001 chr2L_12650001 RAL-900_125b 308 chr2L 9190898 9190959 chr2L 9191037 9191082 6 132 1.0 9.5 5.2 1.0 184 chr2L 9190898 intron tai + chr2L 9190990 intron tai + chr2L 9191082 intron tai + chr2L_6_9190001 chr2L_9190001 RAL-900_125b 309 chr2L 9217944 9218000 chr2L 9222781 9222845 Doc 14 4843 3.5 1.0 2.2 4.4 4901 chr2L 9217944 intron tai + chr2L 9220394 intron tai + chr2L 9222845 intron tai + chr2L_14_9220001 chr2L_9220001 RAL-900_125b 310 chr2L 9227176 9227250 chr2L 9227309 9227354 13 129 1.5 7.5 4.5 2.4 178 chr2L 9227176 intron tai + chr2L 9227265 intron tai + chr2L 9227354 intron tai + chr2L_13_9225001 chr2L_9225001 RAL-900_125b 311 chr2L 9231390 9231441 chr2L 9232161 9232212 16 771 7.0 3.5 5.2 2.6 822 chr2L 9231390 intron tai + chr2L 9231801 intron tai + chr2L 9232212 intron tai + chr2L_16_9230001 chr2L_9230001 RAL-900_125b 312 chr2L 9249293 9249360 chr2L 9249424 9249491 36 131 13.5 11.0 12.2 2.7 198 chr2L 9249293 3` UTR tai + chr2L 9249392 3` UTR tai + chr2L 9249491 3` UTR tai + chr2L_36_9245001 chr2L_9245001 RAL-900_125b 313 chr2L 9266563 9266620 chr2L 9267081 9267154 19 531 7.5 6.5 7.0 2.4 591 chr2L 9266563 intron Ggamma30A + chr2L 9266858 intron Ggamma30A + chr2L 9267154 intron Ggamma30A + chr2L_19_9265001 chr2L_9265001 RAL-900_125b 314 chr2L 9279937 9280011 chr2L 9280081 9280155 18 142 6.5 8.5 7.5 2.1 218 chr2L 9279937 intron Ggamma30A + chr2L 9280046 intron Ggamma30A + chr2L 9280155 intron Ggamma30A + chr2L_18_9280001 chr2L_9280001 RAL-900_125b 315 chr2L 9283156 9283180 chr2L 9283283 9283307 13 126 19.0 11.5 15.2 0.8 151 chr2L 9283156 intron Ggamma30A + chr2L 9283232 intron Ggamma30A + chr2L 9283307 intron Ggamma30A + chr2L_13_9280001 chr2L_9280001 RAL-900_125b 316 chr2L 9284974 9285039 chr2L 9285100 9285130 16 118 6.0 5.0 5.5 2.5 156 chr2L 9284974 intron Ggamma30A + chr2L 9285052 intron Ggamma30A + chr2L 9285130 intron Ggamma30A + chr2L_16_9285001 chr2L_9285001 RAL-900_125b 317 chr2L 9287281 9287349 chr2L 9287423 9287496 31 146 9.0 6.0 7.5 3.6 215 chr2L 9287281 intron Ggamma30A + chr2L 9287388 intron Ggamma30A + chr2L 9287496 intron Ggamma30A + chr2L_31_9285001 chr2L_9285001 RAL-900_125b 318 chr2L 9297328 9297403 chr2L 9297455 9297509 28 126 7.5 8.5 8.0 3.1 181 chr2L 9297328 3` UTR Ggamma30A + chr2L 9297418 3` UTR Ggamma30A + chr2L 9297509 3` UTR Ggamma30A + chr2L_28_9295001 chr2L_9295001 RAL-900_125b 319 chr2L 9300650 9300711 chr2L 9300785 9300846 11 135 9.5 0.0 4.8 1.9 196 chr2L 9300650 3` UTR Ggamma30A + chr2L 9300748 3` UTR Ggamma30A + chr2L 9300846 3` UTR Ggamma30A + chr2L_11_9300001 chr2L_9300001 RAL-900_125b 320 chr2L 9322764 9322834 chr2L 9322890 9322960 28 125 9.0 7.5 8.2 3.0 196 chr2L 9322764 intergenic not near genes chr2L 9322862 intergenic not near genes chr2L 9322960 intergenic not near genes chr2L_28_9320001 chr2L_9320001 RAL-900_125b 321 chr2L 9380195 9380253 chr2L 9380340 9380399 16 145 10.5 10.0 10.2 1.4 204 chr2L 9380195 exon Shawl - chr2L 9380297 intron Shawl - chr2L 9380399 intron Shawl - chr2L_16_9380001 chr2L_9380001 RAL-900_125b 322 chr2L 9391628 9391691 chr2L 9391765 9391828 28 137 0.0 7.0 3.5 6.2 200 chr2L 9391628 intron Shawl - chr2L 9391728 intron Shawl - chr2L 9391828 intron Shawl - chr2L_28_9390001 chr2L_9390001 RAL-900_125b 323 chr2L 9393452 9393520 chr2L 9396469 9396537 jockey 27 3017 7.0 10.0 8.5 2.8 3085 chr2L 9393452 intron Shawl - chr2L 9394994 intron Shawl - chr2L 9396537 intron Shawl - chr2L_27_9390001 chr2L_9390001 RAL-900_125b 324 chr2L 9396928 9396928 chr2L 9397168 9397178 5 242 72.0 93.5 82.8 0.1 250 chr2L 9396928 intron Shawl - chr2L 9397053 intron,3` UTR Shawl -,CG4438 - chr2L 9397178 intron,exon Shawl -,CG4438 - chr2L_5_9395001 chr2L_9395001 RAL-900_125b 325 chr2L 9396927 9396984 chr2L 9397181 9397224 24 242 84.5 87.0 85.8 0.3 297 chr2L 9396927 intron Shawl - chr2L 9397076 intron,3` UTR Shawl -,CG4438 - chr2L 9397224 intron,exon Shawl -,CG4438 - chr2L_24_9395001 chr2L_9395001 RAL-900_125b 326 chr2L 9396925 9396992 chr2L 9397225 9397232 4 268 87.5 76.0 81.8 0.0 307 chr2L 9396925 intron Shawl - chr2L 9397078 intron,3` UTR Shawl -,CG4438 - chr2L 9397232 intron,exon Shawl -,CG4438 - chr2L_4_9395001 chr2L_9395001 RAL-900_125b 327 chr2L 9396716 9396772 chr2L 9401121 9401173 4 4404 64.0 24.5 44.2 0.1 4457 chr2L 9396716 intron Shawl - chr2L 9398944 intron Shawl - chr2L 9401173 intron Shawl - chr2L_4_9395001 chr2L_9395001 RAL-900_125b 328 chr2L 9401186 9401257 chr2L 9401513 9401584 17 319 9.5 10.0 9.8 1.6 398 chr2L 9401186 intron Shawl - chr2L 9401385 intron Shawl - chr2L 9401584 intron Shawl - chr2L_17_9400001 chr2L_9400001 RAL-900_125b 329 chr2L 9407858 9407898 chr2L 9407990 9408030 12 132 10.0 9.5 9.8 1.1 172 chr2L 9407858 intron Shawl - chr2L 9407944 intron Shawl - chr2L 9408030 intron Shawl - chr2L_12_9405001 chr2L_9405001 RAL-900_125b 330 chr2L 9441293 9441351 chr2L 9441432 9441505 20 153 7.5 11.0 9.2 2.0 212 chr2L 9441293 intron numb + chr2L 9441399 intron numb + chr2L 9441505 intron numb + chr2L_20_9440001 chr2L_9440001 RAL-900_125b 331 chr2L 9446255 9446264 chr2L 9446389 9446398 8 133 0.0 2.0 1.0 4.0 143 chr2L 9446255 intron numb + chr2L 9446326 intron numb + chr2L 9446398 intron numb + chr2L_8_9445001 chr2L_9445001 RAL-900_125b 332 chr2L 9489884 9489958 chr2L 9490016 9490090 16 125 6.0 4.0 5.0 2.7 206 chr2L 9489884 intergenic not near genes chr2L 9489987 intergenic not near genes chr2L 9490090 intergenic not near genes chr2L_16_9485001 chr2L_9485001 RAL-900_125b 333 chr2L 9490473 9490487 chr2L 9490603 9490617 5 127 14.0 2.5 8.2 0.5 144 chr2L 9490473 intergenic not near genes chr2L 9490545 intergenic not near genes chr2L 9490617 intergenic not near genes chr2L_5_9490001 chr2L_9490001 RAL-900_125b 334 chr2L 9490489 9490545 chr2L 9490601 9490643 22 127 4.0 2.5 3.2 5.2 154 chr2L 9490489 intergenic not near genes chr2L 9490566 intergenic not near genes chr2L 9490643 intergenic not near genes chr2L_22_9490001 chr2L_9490001 RAL-900_125b 335 chr2L 9506392 9506452 chr2L 9506591 9506637 28 199 11.5 6.0 8.8 2.9 245 chr2L 9506392 intron CG33298 + chr2L 9506514 intron CG33298 + chr2L 9506637 intron CG33298 + chr2L_28_9505001 chr2L_9505001 RAL-900_125b 336 chr2L 9692249 9692331 chr2L 9692389 9692460 27 137 3.0 7.0 5.0 4.5 211 chr2L 9692249 intron Pka-C1 - chr2L 9692354 intron Pka-C1 - chr2L 9692460 intron Pka-C1 - chr2L_27_9690001 chr2L_9690001 RAL-900_125b 337 chr2L 9719740 9719753 chr2L 9719872 9719885 11 132 10.0 8.5 9.2 1.1 145 chr2L 9719740 intron Nckx30C - chr2L 9719812 intron Nckx30C - chr2L 9719885 intron Nckx30C - chr2L_11_9715001 chr2L_9715001 RAL-900_125b 338 chr2L 9719754 9719777 chr2L 9719860 9719888 10 127 4.5 5.5 5.0 1.7 134 chr2L 9719754 intron Nckx30C - chr2L 9719821 intron Nckx30C - chr2L 9719888 intron Nckx30C - chr2L_10_9715001 chr2L_9715001 RAL-900_125b 339 chr2L 9734249 9734283 chr2L 9734380 9734414 14 131 7.5 13.5 10.5 1.2 165 chr2L 9734249 intron Nckx30C - chr2L 9734332 intron Nckx30C - chr2L 9734414 intron Nckx30C - chr2L_14_9730001 chr2L_9730001 RAL-900_125b 340 chr2L 9744814 9744832 chr2L 9744951 9744969 6 137 3.5 11.0 7.2 0.7 155 chr2L 9744814 intron Nckx30C - chr2L 9744892 intron Nckx30C - chr2L 9744969 intron Nckx30C - chr2L_6_9740001 chr2L_9740001 RAL-900_125b 341 chr2L 9837382 9837446 chr2L 9837510 9837574 20 128 4.0 0.0 2.0 6.7 192 chr2L 9837382 intron nAChRalpha6 - chr2L 9837478 intron nAChRalpha6 - chr2L 9837574 intron nAChRalpha6 - chr2L_20_9835001 chr2L_9835001 RAL-900_125b 342 chr2L 9839230 9839288 chr2L 9839365 9839418 24 132 13.0 11.0 12.0 1.8 188 chr2L 9839230 intron nAChRalpha6 - chr2L 9839324 intron nAChRalpha6 - chr2L 9839418 intron nAChRalpha6 - chr2L_24_9835001 chr2L_9835001 RAL-900_125b 343 chr2L 9852729 9852798 chr2L 9852858 9852927 12 127 0.0 9.5 4.8 2.1 198 chr2L 9852729 intron nAChRalpha6 - chr2L 9852828 intron nAChRalpha6 - chr2L 9852927 intron nAChRalpha6 - chr2L_12_9850001 chr2L_9850001 RAL-900_125b 344 chr2L 9855061 9855128 chr2L 9855188 9855246 34 127 10.0 7.5 8.8 3.5 185 chr2L 9855061 intron nAChRalpha6 - chr2L 9855154 intron nAChRalpha6 - chr2L 9855246 intron nAChRalpha6 - chr2L_34_9855001 chr2L_9855001 RAL-900_125b 345 chr2L 9871509 9871546 chr2L 9871648 9871685 14 139 3.0 0.0 1.5 5.6 176 chr2L 9871509 intron nAChRalpha6 - chr2L 9871597 intron nAChRalpha6 - chr2L 9871685 intron nAChRalpha6 - chr2L_14_9870001 chr2L_9870001 RAL-900_125b 346 chr2L 9883117 9883147 chr2L 9883263 9883293 9 146 15.0 11.5 13.2 0.6 176 chr2L 9883117 intron nAChRalpha6 - chr2L 9883205 intron nAChRalpha6 - chr2L 9883293 intron nAChRalpha6 - chr2L_9_9880001 chr2L_9880001 RAL-900_125b 347 chr2L 9893620 9893644 chr2L 9893748 9893759 9 127 16.5 0.0 8.2 1.0 139 chr2L 9893620 intergenic mtDNA-helicase -,Uhg2 -,snoRNA:U14:30Eb - chr2L 9893690 intergenic Uhg2 -,mtDNA-helicase -,snoRNA:U14:30Eb - chr2L 9893759 intergenic Uhg2 -,snoRNA:U14:30Eb -,mtDNA-helicase -,snoRNA:U14:30Ea - chr2L_9_9890001 chr2L_9890001 RAL-900_125b 348 chr2L 9973684 9973689 chr2L 9980853 9980858 HMS-Beagle 4 7169 19.5 10.0 14.8 0.3 7174 chr2L 9973684 intergenic not near genes chr2L 9977271 intergenic not near genes chr2L 9980858 intergenic not near genes chr2L_4_9975001 chr2L_9975001 RAL-900_125b 349 chr2L 9973693 9973751 chr2L 9980852 9980920 HMS-Beagle 24 7167 10.0 9.5 9.8 2.2 7227 chr2L 9973693 intergenic not near genes chr2L 9977306 intergenic not near genes chr2L 9980920 intergenic not near genes chr2L_24_9975001 chr2L_9975001 RAL-900_125b 350 chr2L 9986310 9986325 chr2L 9986449 9986468 9 144 24.0 11.5 17.8 0.5 158 chr2L 9986310 intron bib + chr2L 9986389 intron bib + chr2L 9986468 intron bib + chr2L_9_9985001 chr2L_9985001 RAL-900_125b 351 chr2L 9986333 9986371 chr2L 9986448 9986475 15 128 10.0 11.5 10.8 1.3 142 chr2L 9986333 intron bib + chr2L 9986404 intron bib + chr2L 9986475 intron bib + chr2L_15_9985001 chr2L_9985001 RAL-900_125b 352 chr2L 10020310 10020350 chr2L 10020550 10020595 16 244 6.0 14.0 10.0 1.5 285 chr2L 10020310 intergenic not near genes chr2L 10020452 intergenic not near genes chr2L 10020595 intergenic not near genes chr2L_16_10020001 chr2L_10020001 RAL-900_125b 353 chr2L 10030034 10030067 chr2L 10030167 10030200 9 133 1.0 4.0 2.5 2.6 166 chr2L 10030034 intergenic not near genes chr2L 10030117 intergenic not near genes chr2L 10030200 intergenic not near genes chr2L_9_10030001 chr2L_10030001 RAL-900_125b 354 chr2L 10045368 10045433 chr2L 10045498 10045553 18 127 6.0 6.5 6.2 2.5 185 chr2L 10045368 intergenic not near genes chr2L 10045460 intergenic not near genes chr2L 10045553 intergenic not near genes chr2L_18_10045001 chr2L_10045001 RAL-900_125b 355 chr2L 10045840 10045919 chr2L 10046027 10046105 21 187 6.5 0.0 3.2 5.0 265 chr2L 10045840 intergenic not near genes chr2L 10045972 intergenic not near genes chr2L 10046105 intergenic not near genes chr2L_21_10045001 chr2L_10045001 RAL-900_125b 356 chr2L 10051681 10051708 chr2L 10051816 10051833 13 128 11.5 8.0 9.8 1.2 152 chr2L 10051681 5` UTR CR44874 + chr2L 10051757 5` UTR CR44874 + chr2L 10051833 5` UTR CR44874 + chr2L_13_10050001 chr2L_10050001 RAL-900_125b 357 chr2L 10051709 10051752 chr2L 10051812 10051874 28 124 7.0 7.5 7.2 3.4 165 chr2L 10051709 5` UTR CR44874 + chr2L 10051792 5` UTR CR44874 + chr2L 10051874 5` UTR CR44874 + chr2L_28_10050001 chr2L_10050001 RAL-900_125b 358 chr2L 10095592 10095664 chr2L 10095722 10095759 32 129 13.0 9.0 11.0 2.7 167 chr2L 10095592 intron CG44153 - chr2L 10095676 intron CG44153 - chr2L 10095759 intron CG44153 - chr2L_32_10095001 chr2L_10095001 RAL-900_125b 359 chr2L 10100316 10100345 chr2L 10100449 10100454 9 128 19.0 12.0 15.5 0.5 138 chr2L 10100316 intron CG44153 - chr2L 10100385 intron CG44153 - chr2L 10100454 intron CG44153 - chr2L_9_10100001 chr2L_10100001 RAL-900_125b 360 chr2L 10100348 10100387 chr2L 10100440 10100464 9 108 12.5 9.0 10.8 0.8 116 chr2L 10100348 intron CG44153 - chr2L 10100406 intron CG44153 - chr2L 10100464 intron CG44153 - chr2L_9_10100001 chr2L_10100001 RAL-900_125b 361 chr2L 10138142 10138187 chr2L 10143436 10143481 Rt1c 7 5293 8.5 11.0 9.8 0.6 5339 chr2L 10138142 intron CG44153 - chr2L 10140812 intron CG44153 - chr2L 10143481 intron CG44153 - chr2L_7_10140001 chr2L_10140001 RAL-900_125b 362 chr2L 10153163 10153190 chr2L 10153292 10153314 9 128 13.0 10.5 11.8 0.7 151 chr2L 10153163 intron,exon CG44153 -,CG4839 + chr2L 10153238 intron,intron CG44153 -,CG4839 + chr2L 10153314 intron,intron CG44153 -,CG4839 + chr2L_9_10150001 chr2L_10150001 RAL-900_125b 363 chr2L 10153192 10153219 chr2L 10153291 10153348 14 120 8.0 10.0 9.0 1.4 156 chr2L 10153192 intron,exon CG44153 -,CG4839 + chr2L 10153270 intron,intron CG44153 -,CG4839 + chr2L 10153348 intron,exon CG44153 -,CG4839 + chr2L_14_10150001 chr2L_10150001 RAL-900_125b 364 chr2L 10153220 10153228 chr2L 10153287 10153357 5 116 7.5 9.0 8.2 0.5 137 chr2L 10153220 intron,exon CG44153 -,CG4839 + chr2L 10153288 intron,intron CG44153 -,CG4839 + chr2L 10153357 intron,exon CG44153 -,CG4839 + chr2L_5_10150001 chr2L_10150001 RAL-900_125b 365 chr2L 10156281 10156333 chr2L 10163801 10163853 blood 22 7519 13.0 7.5 10.2 2.0 7572 chr2L 10156281 intron,3` UTR CG44153 -,CG4839 + chr2L 10160067 intron CG44153 - chr2L 10163853 intron CG44153 - chr2L_22_10160001 chr2L_10160001 RAL-900_125b 366 chr2L 10156337 10156345 chr2L 10163795 10163865 blood 4 7500 11.0 6.0 8.5 0.4 7528 chr2L 10156337 intron,3` UTR CG44153 -,CG4839 + chr2L 10160101 intron CG44153 - chr2L 10163865 intron CG44153 - chr2L_4_10160001 chr2L_10160001 RAL-900_125b 367 chr2L 10184945 10184951 chr2L 10185060 10185073 5 119 13.5 9.0 11.2 0.4 128 chr2L 10184945 exon Sur - chr2L 10185009 exon Sur - chr2L 10185073 exon Sur - chr2L_5_10185001 chr2L_10185001 RAL-900_125b 368 chr2L 10184953 10184982 chr2L 10185054 10185109 14 118 10.0 9.0 9.5 1.3 156 chr2L 10184953 exon Sur - chr2L 10185031 exon Sur - chr2L 10185109 exon Sur - chr2L_14_10185001 chr2L_10185001 RAL-900_125b 369 chr2L 10191411 10191482 chr2L 10191544 10191615 19 133 6.0 7.0 6.5 2.5 204 chr2L 10191411 intron,exon Sur -,CG31874 - chr2L 10191513 intron Sur - chr2L 10191615 exon Sur - chr2L_19_10190001 chr2L_10190001 RAL-900_125b 370 chr2L 10204457 10204524 chr2L 10204590 10204657 26 133 12.0 14.0 13.0 1.9 200 chr2L 10204457 intergenic CG34159 -,CG5734 - chr2L 10204557 intergenic CG5734 -,CG34159 - chr2L 10204657 intergenic CG5734 -,CG34159 - chr2L_26_10200001 chr2L_10200001 RAL-900_125b 371 chr2L 10232884 10232891 chr2L 10233012 10233019 4 128 21.5 12.5 17.0 0.2 135 chr2L 10232884 intron eEF1delta + chr2L 10232952 intron eEF1delta + chr2L 10233019 intron eEF1delta + chr2L_4_10230001 chr2L_10230001 RAL-900_125b 372 chr2L 10232893 10232941 chr2L 10233011 10233069 32 128 10.5 12.5 11.5 2.6 176 chr2L 10232893 intron eEF1delta + chr2L 10232981 intron eEF1delta + chr2L 10233069 intron eEF1delta + chr2L_32_10230001 chr2L_10230001 RAL-900_125b 373 chr2L 10294629 10294683 chr2L 10294765 10294819 26 136 16.5 8.5 12.5 1.9 190 chr2L 10294629 exon Hand - chr2L 10294724 intron Hand - chr2L 10294819 intron Hand - chr2L_26_10290001 chr2L_10290001 RAL-900_125b 374 chr2L 10348336 10348405 chr2L 10348469 10348538 23 133 8.5 0.0 4.2 4.4 202 chr2L 10348336 intron CG34367 - chr2L 10348437 intron CG34367 - chr2L 10348538 intron CG34367 - chr2L_23_10345001 chr2L_10345001 RAL-900_125b 375 chr2L 10442235 10442251 chr2L 10442362 10442378 7 127 11.5 4.5 8.0 0.8 143 chr2L 10442235 intergenic CR45375 -,loh + chr2L 10442306 intergenic CR45375 -,loh + chr2L 10442378 intergenic loh +,CR45375 - chr2L_7_10440001 chr2L_10440001 RAL-900_125b 376 chr2L 10456437 10456642 chr2L 10456573 10456772 17 132 0.5 0.0 0.2 14.2 335 chr2L 10456437 intron CG5322 - chr2L 10456604 intron CG5322 - chr2L 10456772 intron CG5322 - chr2L_17_10455001 chr2L_10455001 RAL-900_125b 377 chr2L 10458187 10458213 chr2L 10458333 10458359 4 146 0.0 0.0 0.0 4.0 172 chr2L 10458187 intron LM408 + chr2L 10458273 intron LM408 + chr2L 10458359 intron LM408 + chr2L_4_10455001 chr2L_10455001 RAL-900_125b 378 chr2L 10480265 10480334 chr2L 10480393 10480480 16 130 7.5 0.0 3.8 3.3 215 chr2L 10480265 intron RluA-2 + chr2L 10480372 intron RluA-2 + chr2L 10480480 intron RluA-2 + chr2L_16_10480001 chr2L_10480001 RAL-900_125b 379 chr2L 10495295 10495322 chr2L 10495422 10495449 17 126 15.5 29.0 22.2 0.7 154 chr2L 10495295 intron Myo31DF - chr2L 10495372 intron Myo31DF - chr2L 10495449 intron Myo31DF - chr2L_17_10495001 chr2L_10495001 RAL-900_125b 380 chr2L 10515313 10515389 chr2L 10515456 10515521 43 142 14.0 10.0 12.0 3.3 208 chr2L 10515313 intron,intron CG45083 -,Fatp - chr2L 10515417 intron,intron CG45083 -,Fatp - chr2L 10515521 intron,intron CG45083 -,Fatp - chr2L_43_10515001 chr2L_10515001 RAL-900_125b 381 chr2L 10519493 10519502 chr2L 10519799 10519813 5 307 0.0 16.0 8.0 0.6 320 chr2L 10519493 intergenic Lrr47 + chr2L 10519653 intergenic Lrr47 + chr2L 10519813 intergenic not near genes chr2L_5_10515001 chr2L_10515001 RAL-900_125b 382 chr2L 10563863 10563940 chr2L 10564006 10564083 38 140 3.5 5.0 4.2 7.3 220 chr2L 10563863 intron Trim9 + chr2L 10563973 intron Trim9 + chr2L 10564083 intron Trim9 + chr2L_38_10560001 chr2L_10560001 RAL-900_125b 383 chr2L 10574520 10574599 chr2L 10574667 10574746 34 146 5.5 5.0 5.2 5.5 226 chr2L 10574520 intron Trim9 + chr2L 10574633 intron Trim9 + chr2L 10574746 intron Trim9 + chr2L_34_10570001 chr2L_10570001 RAL-900_125b 384 chr2L 10580643 10580695 chr2L 10580769 10580817 6 123 7.5 9.0 8.2 0.7 174 chr2L 10580643 intron Trim9 + chr2L 10580730 intron Trim9 + chr2L 10580817 intron Trim9 + chr2L_6_10580001 chr2L_10580001 RAL-900_125b 385 chr2L 10589020 10589080 chr2L 10589146 10589206 10 126 7.0 5.5 6.2 1.4 186 chr2L 10589020 intron Trim9 + chr2L 10589113 intron Trim9 + chr2L 10589206 intron Trim9 + chr2L_10_10585001 chr2L_10585001 RAL-900_125b 386 chr2L 10592796 10592863 chr2L 10600508 10600575 opus 36 7711 9.0 8.0 8.5 3.8 7779 chr2L 10592796 intron Trim9 + chr2L 10596686 intron Trim9 + chr2L 10600575 intron Trim9 + chr2L_36_10595001 chr2L_10595001 RAL-900_125b 387 chr2L 10628324 10628339 chr2L 10628520 10628540 8 200 22.5 13.5 18.0 0.4 216 chr2L 10628324 intergenic Trim9 + chr2L 10628432 intergenic Trim9 + chr2L 10628540 intergenic Trim9 + chr2L_8_10625001 chr2L_10625001 RAL-900_125b 388 chr2L 10628344 10628384 chr2L 10628518 10628585 17 198 12.5 13.0 12.8 1.2 241 chr2L 10628344 intergenic Trim9 + chr2L 10628464 intergenic Trim9 + chr2L 10628585 intergenic not near genes chr2L_17_10625001 chr2L_10625001 RAL-900_125b 389 chr2L 10631162 10631240 chr2L 10631344 10631428 20 184 6.5 0.0 3.2 4.8 266 chr2L 10631162 intron CG7329 - chr2L 10631295 intron CG7329 - chr2L 10631428 intron CG7329 - chr2L_20_10630001 chr2L_10630001 RAL-900_125b 390 chr2L 10634714 10634784 chr2L 10634844 10634914 32 130 9.0 9.5 9.2 3.1 200 chr2L 10634714 intron CG7329 - chr2L 10634814 intron CG7329 - chr2L 10634914 intron CG7329 - chr2L_32_10630001 chr2L_10630001 RAL-900_125b 391 chr2L 10640594 10640670 chr2L 10640733 10640809 30 138 6.0 4.5 5.2 4.8 215 chr2L 10640594 exon CG31872 + chr2L 10640702 exon CG31872 + chr2L 10640809 exon CG31872 + chr2L_30_10640001 chr2L_10640001 RAL-900_125b 392 chr2L 10723496 10723553 chr2L 10723640 10723697 17 144 4.5 6.5 5.5 2.6 201 chr2L 10723496 intergenic not near genes chr2L 10723596 intergenic not near genes chr2L 10723697 intergenic not near genes chr2L_17_10720001 chr2L_10720001 RAL-900_125b 393 chr2L 10803722 10803801 chr2L 10803857 10803937 29 135 6.5 7.5 7.0 3.6 215 chr2L 10803722 intergenic not near genes chr2L 10803830 intergenic Nos - chr2L 10803937 intergenic Nos - chr2L_29_10800001 chr2L_10800001 RAL-900_125b 394 chr2L 10817236 10817278 chr2L 10817367 10817409 17 126 17.5 22.0 19.8 0.8 173 chr2L 10817236 intron Nos - chr2L 10817322 intron Nos - chr2L 10817409 intron Nos - chr2L_17_10815001 chr2L_10815001 RAL-900_125b 395 chr2L 10852124 10852176 chr2L 10852263 10852290 29 138 14.5 17.0 15.8 1.7 166 chr2L 10852124 intron CG43129 + chr2L 10852207 intron CG43129 + chr2L 10852290 intron CG43129 + chr2L_29_10850001 chr2L_10850001 RAL-900_125b 396 chr2L 10862794 10862867 chr2L 10864459 10864500 Rt1c 17 1658 10.0 11.0 10.5 1.5 1706 chr2L 10862794 intron CR43807 - chr2L 10863647 intron CR43807 - chr2L 10864500 3` UTR CR43807 - chr2L_17_10860001 chr2L_10860001 RAL-900_125b 397 chr2L 10876313 10876391 chr2L 10876451 10876499 19 121 4.0 7.5 5.8 2.8 186 chr2L 10876313 intergenic not near genes chr2L 10876406 intergenic not near genes chr2L 10876499 intergenic not near genes chr2L_19_10875001 chr2L_10875001 RAL-900_125b 398 chr2L 10876531 10876565 chr2L 10883638 10883673 297 10 7107 6.5 5.5 6.0 1.4 7142 chr2L 10876531 intergenic not near genes chr2L 10880102 intergenic not near genes chr2L 10883673 intergenic not near genes chr2L_10_10880001 chr2L_10880001 RAL-900_125b 399 chr2L 10891445 10891454 chr2L 10891609 10891618 5 164 22.0 10.0 16.0 0.3 173 chr2L 10891445 intergenic not near genes chr2L 10891532 intergenic not near genes chr2L 10891618 intergenic not near genes chr2L_5_10890001 chr2L_10890001 RAL-900_125b 400 chr2L 10891460 10891518 chr2L 10891599 10891682 17 159 6.0 7.5 6.8 2.2 222 chr2L 10891460 intergenic not near genes chr2L 10891571 intergenic not near genes chr2L 10891682 intergenic not near genes chr2L_17_10890001 chr2L_10890001 RAL-900_125b 401 chr2L 10945028 10945038 chr2L 10945332 10945347 6 307 20.5 3.5 12.0 0.5 319 chr2L 10945028 intron dpr2 - chr2L 10945188 intron dpr2 - chr2L 10945347 intron dpr2 - chr2L_6_10945001 chr2L_10945001 RAL-900_125b 402 chr2L 10945043 10945088 chr2L 10945331 10945369 9 296 5.0 3.5 4.2 1.7 326 chr2L 10945043 intron dpr2 - chr2L 10945206 intron dpr2 - chr2L 10945369 intron dpr2 - chr2L_9_10945001 chr2L_10945001 RAL-900_125b 403 chr2L 10946919 10946970 chr2L 10956166 10956235 roo 19 9262 5.5 9.0 7.2 2.3 9316 chr2L 10946919 intron dpr2 - chr2L 10951577 intron dpr2 - chr2L 10956235 intron dpr2 - chr2L_19_10950001 chr2L_10950001 RAL-900_125b 404 chr2L 11055016 11055077 chr2L 11055151 11055212 26 135 5.5 10.0 7.8 3.0 196 chr2L 11055016 intron Samuel - chr2L 11055114 intron Samuel - chr2L 11055212 intron Samuel - chr2L_26_11055001 chr2L_11055001 RAL-900_125b 405 chr2L 11146451 11146531 chr2L 11146579 11146659 5 128 7.0 0.0 3.5 1.1 208 chr2L 11146451 intron Gyc32E - chr2L 11146555 intron Gyc32E - chr2L 11146659 intron Gyc32E - chr2L_5_11145001 chr2L_11145001 RAL-900_125b 406 chr2L 11191430 11191448 chr2L 11191558 11191576 10 128 8.0 9.5 8.8 1.0 146 chr2L 11191430 intron Ca-beta - chr2L 11191503 intron Ca-beta - chr2L 11191576 intron Ca-beta - chr2L_10_11190001 chr2L_11190001 RAL-900_125b 407 chr2L 11193527 11193588 chr2L 11193660 11193732 19 135 1.5 10.0 5.8 2.8 205 chr2L 11193527 intron Ca-beta - chr2L 11193630 intron Ca-beta - chr2L 11193732 intron Ca-beta - chr2L_19_11190001 chr2L_11190001 RAL-900_125b 408 chr2L 11224012 11224033 chr2L 11224173 11224194 11 161 23.5 10.5 17.0 0.6 182 chr2L 11224012 intron ab + chr2L 11224103 intron ab + chr2L 11224194 intron ab + chr2L_11_11220001 chr2L_11220001 RAL-900_125b 409 chr2L 11224035 11224082 chr2L 11224169 11224243 28 160 10.0 9.0 9.5 2.7 208 chr2L 11224035 intron ab + chr2L 11224139 intron ab + chr2L 11224243 intron ab + chr2L_28_11220001 chr2L_11220001 RAL-900_125b 410 chr2L 11248526 11248590 chr2L 11248659 11248723 29 126 10.0 9.0 9.5 2.8 197 chr2L 11248526 intron ab + chr2L 11248624 intron ab + chr2L 11248723 intron ab + chr2L_29_11245001 chr2L_11245001 RAL-900_125b 411 chr2L 11292328 11292400 chr2L 11292460 11292532 32 132 9.5 6.5 8.0 3.6 204 chr2L 11292328 intergenic not near genes chr2L 11292430 intergenic not near genes chr2L 11292532 intergenic not near genes chr2L_32_11290001 chr2L_11290001 RAL-900_125b 412 chr2L 11293681 11293688 chr2L 11293868 11293875 4 187 23.5 9.0 16.2 0.2 194 chr2L 11293681 intergenic not near genes chr2L 11293778 intergenic not near genes chr2L 11293875 intergenic not near genes chr2L_4_11290001 chr2L_11290001 RAL-900_125b 413 chr2L 11293689 11293749 chr2L 11293866 11293936 26 187 9.0 9.0 9.0 2.6 247 chr2L 11293689 intergenic not near genes chr2L 11293812 intergenic not near genes chr2L 11293936 intergenic not near genes chr2L_26_11290001 chr2L_11290001 RAL-900_125b 414 chr2L 11315219 11315264 chr2L 11317673 11317718 G2 14 2453 11.5 12.0 11.8 1.1 2499 chr2L 11315219 intergenic not near genes chr2L 11316468 intergenic not near genes chr2L 11317718 intergenic not near genes chr2L_14_11315001 chr2L_11315001 RAL-900_125b 415 chr2L 11356356 11356421 chr2L 11356517 11356585 22 162 7.0 0.0 3.5 4.9 229 chr2L 11356356 intergenic not near genes chr2L 11356470 intergenic not near genes chr2L 11356585 intergenic not near genes chr2L_22_11355001 chr2L_11355001 RAL-900_125b 416 chr2L 11357934 11358004 chr2L 11358062 11358132 30 128 9.5 6.5 8.0 3.3 198 chr2L 11357934 intergenic not near genes chr2L 11358033 intergenic not near genes chr2L 11358132 intergenic not near genes chr2L_30_11355001 chr2L_11355001 RAL-900_125b 417 chr2L 11379902 11379953 chr2L 11380034 11380085 9 132 9.0 0.0 4.5 1.6 183 chr2L 11379902 intergenic not near genes chr2L 11379994 intergenic not near genes chr2L 11380085 intergenic not near genes chr2L_9_11375001 chr2L_11375001 RAL-900_125b 418 chr2L 11380585 11380600 chr2L 11380691 11380727 7 110 3.5 5.5 4.5 1.3 142 chr2L 11380585 intergenic not near genes chr2L 11380656 intergenic not near genes chr2L 11380727 intergenic not near genes chr2L_7_11380001 chr2L_11380001 RAL-900_125b 419 chr2L 11380603 11380636 chr2L 11380690 11380762 10 121 2.0 5.5 3.8 2.1 159 chr2L 11380603 intergenic not near genes chr2L 11380682 intergenic not near genes chr2L 11380762 intergenic not near genes chr2L_10_11380001 chr2L_11380001 RAL-900_125b 420 chr2L 11395002 11395050 chr2L 11395134 11395182 24 132 3.0 4.0 3.5 5.3 180 chr2L 11395002 intergenic not near genes chr2L 11395092 intergenic not near genes chr2L 11395182 intergenic not near genes chr2L_24_11395001 chr2L_11395001 RAL-900_125b 421 chr2L 11399472 11399530 chr2L 11399602 11399657 23 128 5.5 0.0 2.8 6.1 185 chr2L 11399472 intergenic not near genes chr2L 11399564 intergenic not near genes chr2L 11399657 intergenic not near genes chr2L_23_11395001 chr2L_11395001 RAL-900_125b 422 chr2L 11413244 11413322 chr2L 11413418 11413496 37 174 6.5 7.5 7.0 4.6 252 chr2L 11413244 intergenic not near genes chr2L 11413370 intergenic not near genes chr2L 11413496 intergenic not near genes chr2L_37_11410001 chr2L_11410001 RAL-900_125b 423 chr2L 11418605 11418684 chr2L 11418734 11418813 26 126 4.0 4.0 4.0 5.2 208 chr2L 11418605 intergenic not near genes chr2L 11418709 intergenic not near genes chr2L 11418813 intergenic not near genes chr2L_26_11415001 chr2L_11415001 RAL-900_125b 424 chr2L 11450073 11450154 chr2L 11450209 11450286 16 134 0.5 5.5 3.0 4.0 213 chr2L 11450073 intergenic not near genes chr2L 11450180 intergenic not near genes chr2L 11450286 intergenic not near genes chr2L_16_11450001 chr2L_11450001 RAL-900_125b 425 chr2L 11491093 11491124 chr2L 11491224 11491255 11 127 0.0 9.5 4.8 1.9 162 chr2L 11491093 intergenic not near genes chr2L 11491174 intergenic not near genes chr2L 11491255 intergenic not near genes chr2L_11_11490001 chr2L_11490001 RAL-900_125b 426 chr2L 11491125 11491156 chr2L 11491221 11491287 18 121 0.0 8.5 4.2 3.5 162 chr2L 11491125 intergenic not near genes chr2L 11491206 intergenic not near genes chr2L 11491287 intergenic not near genes chr2L_18_11490001 chr2L_11490001 RAL-900_125b 427 chr2L 11492977 11492994 chr2L 11493167 11493184 4 190 0.0 10.5 5.2 0.6 207 chr2L 11492977 intergenic not near genes chr2L 11493080 intergenic not near genes chr2L 11493184 intergenic not near genes chr2L_4_11490001 chr2L_11490001 RAL-900_125b 428 chr2L 11537141 11537207 chr2L 11537273 11537283 15 121 6.0 5.5 5.8 2.2 142 chr2L 11537141 intergenic CG43438 + chr2L 11537212 intergenic CG43438 + chr2L 11537283 intergenic CG43438 + chr2L_15_11535001 chr2L_11535001 RAL-900_125b 429 chr2L 11537712 11537778 chr2L 11537879 11537935 29 167 7.5 7.0 7.2 3.5 223 chr2L 11537712 intergenic not near genes chr2L 11537824 intergenic not near genes chr2L 11537935 intergenic not near genes chr2L_29_11535001 chr2L_11535001 RAL-900_125b 430 chr2L 11540538 11540604 chr2L 11547993 11548056 Tabor 26 7454 6.5 8.5 7.5 3.1 7518 chr2L 11540538 intergenic not near genes chr2L 11544297 intergenic not near genes chr2L 11548056 intergenic not near genes chr2L_26_11540001 chr2L_11540001 RAL-900_125b 431 chr2L 11555361 11555424 chr2L 11555531 11555593 29 167 5.0 0.0 2.5 8.3 232 chr2L 11555361 intergenic not near genes chr2L 11555477 intergenic not near genes chr2L 11555593 intergenic not near genes chr2L_29_11555001 chr2L_11555001 RAL-900_125b 432 chr2L 11563599 11563659 chr2L 11568853 11568913 copia 14 5254 6.0 7.0 6.5 1.9 5314 chr2L 11563599 intergenic not near genes chr2L 11566256 intergenic not near genes chr2L 11568913 intergenic not near genes chr2L_14_11565001 chr2L_11565001 RAL-900_125b 433 chr2L 11584629 11584664 chr2L 11584759 11584790 16 126 8.5 5.0 6.8 2.1 161 chr2L 11584629 intron kek2 + chr2L 11584710 intron kek2 + chr2L 11584790 intron kek2 + chr2L_16_11580001 chr2L_11580001 RAL-900_125b 434 chr2L 11612621 11612639 chr2L 11612759 11612777 10 138 17.5 13.5 15.5 0.6 156 chr2L 11612621 intron kek2 + chr2L 11612699 intron kek2 + chr2L 11612777 intron kek2 + chr2L_10_11610001 chr2L_11610001 RAL-900_125b 435 chr2L 11612640 11612667 chr2L 11612758 11612805 11 135 11.5 13.5 12.5 0.8 165 chr2L 11612640 intron kek2 + chr2L 11612722 intron kek2 + chr2L 11612805 intron kek2 + chr2L_11_11610001 chr2L_11610001 RAL-900_125b 436 chr2L 11612671 11612692 chr2L 11612757 11612830 10 133 8.0 13.5 10.8 0.8 159 chr2L 11612671 intron kek2 + chr2L 11612750 intron kek2 + chr2L 11612830 intron kek2 + chr2L_10_11610001 chr2L_11610001 RAL-900_125b 437 chr2L 11614009 11614042 chr2L 11615554 11615572 hopper2 7 1538 25.5 10.0 17.8 0.4 1563 chr2L 11614009 intron kek2 + chr2L 11614790 intron kek2 + chr2L 11615572 intron kek2 + chr2L_7_11610001 chr2L_11610001 RAL-900_125b 438 chr2L 11614044 11614073 chr2L 11615549 11615617 hopper2 15 1527 13.5 10.0 11.8 1.2 1573 chr2L 11614044 intron kek2 + chr2L 11614830 intron kek2 + chr2L 11615617 intron kek2 + chr2L_15_11610001 chr2L_11610001 RAL-900_125b 439 chr2L 11661145 11661157 chr2L 11661283 11661295 7 138 16.5 9.0 12.8 0.5 150 chr2L 11661145 intergenic CR44497 - chr2L 11661220 intergenic CR44497 -,CR44479 - chr2L 11661295 intergenic CR44497 -,CR44479 - chr2L_7_11660001 chr2L_11660001 RAL-900_125b 440 chr2L 11661162 11661170 chr2L 11661274 11661308 11 135 15.0 7.5 11.2 0.9 146 chr2L 11661162 intergenic CR44497 - chr2L 11661235 intergenic CR44497 -,CR44479 - chr2L 11661308 intergenic CR44497 -,CR44479 - chr2L_11_11660001 chr2L_11660001 RAL-900_125b 441 chr2L 11661174 11661193 chr2L 11661272 11661331 11 134 9.5 7.5 8.5 1.2 157 chr2L 11661174 intergenic CR44497 - chr2L 11661252 intergenic CR44497 -,CR44479 - chr2L 11661331 intergenic CR44479 -,CR44497 - chr2L_11_11660001 chr2L_11660001 RAL-900_125b 442 chr2L 11672090 11672164 chr2L 11672247 11672321 30 157 5.5 5.5 5.5 4.6 231 chr2L 11672090 intergenic not near genes chr2L 11672206 intergenic not near genes chr2L 11672321 intergenic not near genes chr2L_30_11670001 chr2L_11670001 RAL-900_125b 443 chr2L 11676288 11676294 chr2L 11676417 11676423 4 129 7.5 0.0 3.8 0.8 135 chr2L 11676288 intergenic not near genes chr2L 11676356 intergenic not near genes chr2L 11676423 intergenic not near genes chr2L_4_11675001 chr2L_11675001 RAL-900_125b 444 chr2L 11702023 11702099 chr2L 11702149 11702213 17 120 3.0 8.5 5.8 2.5 190 chr2L 11702023 intergenic not near genes chr2L 11702118 intergenic not near genes chr2L 11702213 intergenic not near genes chr2L_17_11700001 chr2L_11700001 RAL-900_125b 445 chr2L 11710112 11710128 chr2L 11710238 11710254 10 126 9.5 0.0 4.8 1.7 142 chr2L 11710112 intergenic not near genes chr2L 11710183 intergenic not near genes chr2L 11710254 intergenic not near genes chr2L_10_11710001 chr2L_11710001 RAL-900_125b 446 chr2L 11713475 11713540 chr2L 11720977 11721050 blood 25 7509 5.5 0.5 3.0 6.2 7575 chr2L 11713475 intergenic not near genes chr2L 11717262 intergenic not near genes chr2L 11721050 intergenic CR44143 + chr2L_25_11715001 chr2L_11715001 RAL-900_125b 447 chr2L 11772031 11772054 chr2L 11772175 11772198 5 144 13.5 2.5 8.0 0.6 167 chr2L 11772031 intergenic not near genes chr2L 11772114 intergenic not near genes chr2L 11772198 intergenic not near genes chr2L_5_11770001 chr2L_11770001 RAL-900_125b 448 chr2L 11820385 11820456 chr2L 11820520 11820587 25 133 0.0 10.5 5.2 4.0 202 chr2L 11820385 intron Pde1c - chr2L 11820486 intron Pde1c - chr2L 11820587 intron Pde1c - chr2L_25_11820001 chr2L_11820001 RAL-900_125b 449 chr2L 11825658 11825667 chr2L 11825787 11825796 6 129 24.5 0.0 12.2 0.5 138 chr2L 11825658 intron Pde1c - chr2L 11825727 intron Pde1c - chr2L 11825796 intron Pde1c - chr2L_6_11825001 chr2L_11825001 RAL-900_125b 450 chr2L 11841297 11841366 chr2L 11841444 11841523 18 152 8.0 0.0 4.0 3.6 226 chr2L 11841297 intron Pde1c - chr2L 11841410 intron Pde1c - chr2L 11841523 intron Pde1c - chr2L_18_11840001 chr2L_11840001 RAL-900_125b 451 chr2L 11862311 11862377 chr2L 11862454 11862520 25 143 5.5 6.5 6.0 3.6 209 chr2L 11862311 intron Pde1c - chr2L 11862416 intron Pde1c - chr2L 11862520 intron Pde1c - chr2L_25_11860001 chr2L_11860001 RAL-900_125b 452 chr2L 11906655 11906720 chr2L 11906804 11906869 25 148 9.0 7.0 8.0 2.8 214 chr2L 11906655 intron Pde1c - chr2L 11906762 intron Pde1c - chr2L 11906869 intron Pde1c - chr2L_25_11905001 chr2L_11905001 RAL-900_125b 453 chr2L 11951922 11951996 chr2L 11952060 11952134 34 138 7.0 7.5 7.2 4.1 212 chr2L 11951922 intergenic CR43314 - chr2L 11952028 intergenic CR43314 - chr2L 11952134 intergenic CR43314 - chr2L_34_11950001 chr2L_11950001 RAL-900_125b 454 chr2L 12008507 12008529 chr2L 12008636 12008648 6 127 19.0 9.0 14.0 0.4 141 chr2L 12008507 exon Rh5 + chr2L 12008578 exon Rh5 + chr2L 12008648 exon Rh5 + chr2L_6_12005001 chr2L_12005001 RAL-900_125b 455 chr2L 12008531 12008573 chr2L 12008635 12008702 21 123 9.5 9.0 9.2 2.1 171 chr2L 12008531 exon Rh5 + chr2L 12008616 exon Rh5 + chr2L 12008702 intron Rh5 + chr2L_21_12005001 chr2L_12005001 RAL-900_125b 456 chr2L 12026757 12026774 chr2L 12026988 12027005 5 231 4.5 0.0 2.2 1.6 248 chr2L 12026757 intergenic not near genes chr2L 12026881 intergenic not near genes chr2L 12027005 intergenic dmGlut + chr2L_5_12025001 chr2L_12025001 RAL-900_125b 457 chr2L 12031341 12031414 chr2L 12031472 12031545 29 130 8.0 0.5 4.2 5.6 204 chr2L 12031341 intron dmGlut + chr2L 12031443 intron dmGlut + chr2L 12031545 intron dmGlut + chr2L_29_12030001 chr2L_12030001 RAL-900_125b 458 chr2L 12067285 12067347 chr2L 12074387 12074449 297 26 7102 13.5 10.5 12.0 2.0 7164 chr2L 12067285 intergenic not near genes chr2L 12070867 intergenic not near genes chr2L 12074449 intergenic not near genes chr2L_26_12070001 chr2L_12070001 RAL-900_125b 459 chr2L 12111973 12112049 chr2L 12112133 12112210 12 161 0.0 9.0 4.5 2.2 237 chr2L 12111973 3` UTR Phae2 + chr2L 12112092 3` UTR Phae2 + chr2L 12112210 3` UTR Phae2 + chr2L_12_12110001 chr2L_12110001 RAL-900_125b 460 chr2L 12131418 12131490 chr2L 12131564 12131636 27 145 11.5 8.5 10.0 2.5 218 chr2L 12131418 exon rho-6 - chr2L 12131527 intron rho-6 - chr2L 12131636 intron rho-6 - chr2L_27_12130001 chr2L_12130001 RAL-900_125b 461 chr2L 12132686 12132743 chr2L 12132822 12132879 24 136 0.0 11.5 5.8 3.5 193 chr2L 12132686 intron rho-6 - chr2L 12132782 intron rho-6 - chr2L 12132879 intron rho-6 - chr2L_24_12130001 chr2L_12130001 RAL-900_125b 462 chr2L 12157561 12157636 chr2L 12157690 12157758 25 123 7.5 8.5 8.0 2.8 197 chr2L 12157561 intron CG31760 + chr2L 12157660 intron CG31760 + chr2L 12157758 intron CG31760 + chr2L_25_12155001 chr2L_12155001 RAL-900_125b 463 chr2L 12175764 12175807 chr2L 12175895 12175939 8 132 10.0 0.0 5.0 1.3 175 chr2L 12175764 intron,exon aret +,atilla - chr2L 12175852 intron,intron aret +,atilla - chr2L 12175939 intron,intron aret +,atilla - chr2L_8_12175001 chr2L_12175001 RAL-900_125b 464 chr2L 12195774 12195782 chr2L 12195903 12195911 5 129 6.0 7.0 6.5 0.7 137 chr2L 12195774 intron aret + chr2L 12195842 intron aret + chr2L 12195911 intron aret + chr2L_5_12195001 chr2L_12195001 RAL-900_125b 465 chr2L 12224814 12224891 chr2L 12224941 12225017 20 124 1.0 6.0 3.5 4.4 203 chr2L 12224814 intron aret + chr2L 12224916 intron aret + chr2L 12225017 intron aret + chr2L_20_12220001 chr2L_12220001 RAL-900_125b 466 chr2L 12229527 12229589 chr2L 12229653 12229716 16 127 11.5 0.0 5.8 2.4 189 chr2L 12229527 intron aret + chr2L 12229622 intron aret + chr2L 12229716 intron aret + chr2L_16_12225001 chr2L_12225001 RAL-900_125b 467 chr2L 12259522 12259524 chr2L 12259672 12259674 4 150 13.0 0.0 6.5 0.5 152 chr2L 12259522 intron aret + chr2L 12259598 intron aret + chr2L 12259674 intron aret + chr2L_4_12255001 chr2L_12255001 RAL-900_125b 468 chr2L 12264883 12264926 chr2L 12264996 12265039 12 121 0.0 0.0 0.0 12.0 156 chr2L 12264883 intron aret + chr2L 12264961 intron aret + chr2L 12265039 intron aret + chr2L_12_12260001 chr2L_12260001 RAL-900_125b 469 chr2L 12279877 12279903 chr2L 12280005 12280029 9 127 10.0 20.5 15.2 0.6 152 chr2L 12279877 intron aret + chr2L 12279953 intron aret + chr2L 12280029 intron aret + chr2L_9_12275001 chr2L_12275001 RAL-900_125b 470 chr2L 12299472 12299518 chr2L 12299604 12299650 23 130 8.5 7.0 7.8 2.6 178 chr2L 12299472 intron aret + chr2L 12299561 intron aret + chr2L 12299650 intron aret + chr2L_23_12295001 chr2L_12295001 RAL-900_125b 471 chr2L 12321188 12321259 chr2L 12321315 12321384 19 128 8.5 5.0 6.8 2.4 196 chr2L 12321188 intergenic not near genes chr2L 12321286 intergenic not near genes chr2L 12321384 intergenic not near genes chr2L_19_12320001 chr2L_12320001 RAL-900_125b 472 chr2L 12366819 12366887 chr2L 12366955 12367023 29 136 7.0 10.5 8.8 3.0 204 chr2L 12366819 intron bru-2 + chr2L 12366921 intron bru-2 + chr2L 12367023 intron bru-2 + chr2L_29_12365001 chr2L_12365001 RAL-900_125b 473 chr2L 12410963 12411015 chr2L 12411092 12411144 18 129 13.0 0.0 6.5 2.4 181 chr2L 12410963 intron vir-1 - chr2L 12411054 intron vir-1 - chr2L 12411144 intron vir-1 - chr2L_18_12410001 chr2L_12410001 RAL-900_125b 474 chr2L 12420935 12420941 chr2L 12421312 12421322 4 380 15.5 10.0 12.8 0.3 387 chr2L 12420935 intron vir-1 - chr2L 12421128 intron vir-1 - chr2L 12421322 intron vir-1 - chr2L_4_12420001 chr2L_12420001 RAL-900_125b 475 chr2L 12420959 12420995 chr2L 12421300 12421376 15 378 8.5 6.5 7.5 1.8 417 chr2L 12420959 intron vir-1 - chr2L 12421168 intron vir-1 - chr2L 12421376 intron vir-1 - chr2L_15_12420001 chr2L_12420001 RAL-900_125b 476 chr2L 12424344 12424376 chr2L 12424467 12424502 12 126 3.5 11.0 7.2 1.5 158 chr2L 12424344 intergenic not near genes chr2L 12424423 intergenic CG6405 + chr2L 12424502 intergenic CG6405 + chr2L_12_12420001 chr2L_12420001 RAL-900_125b 477 chr2L 12458245 12458274 chr2L 12458378 12458406 13 131 6.5 5.0 5.8 1.9 161 chr2L 12458245 intron bun - chr2L 12458326 intron bun - chr2L 12458406 intron bun - chr2L_13_12455001 chr2L_12455001 RAL-900_125b 478 chr2L 12466197 12466242 chr2L 12466333 12466378 19 136 4.0 0.0 2.0 6.3 181 chr2L 12466197 intron bun - chr2L 12466288 intron bun - chr2L 12466378 intron bun - chr2L_19_12465001 chr2L_12465001 RAL-900_125b 479 chr2L 12471083 12471137 chr2L 12471209 12471263 13 126 7.0 16.5 11.8 1.0 180 chr2L 12471083 intron bun - chr2L 12471173 intron bun - chr2L 12471263 intron bun - chr2L_13_12470001 chr2L_12470001 RAL-900_125b 480 chr2L 12481328 12481404 chr2L 12481460 12481534 14 130 4.0 5.5 4.8 2.4 206 chr2L 12481328 intron bun - chr2L 12481431 intron bun - chr2L 12481534 intron bun - chr2L_14_12480001 chr2L_12480001 RAL-900_125b 481 chr2L 12497403 12497421 chr2L 12497536 12497554 6 133 7.5 0.0 3.8 1.2 151 chr2L 12497403 intron bun - chr2L 12497478 intron bun - chr2L 12497554 intron bun - chr2L_6_12495001 chr2L_12495001 RAL-900_125b 482 chr2L 12500572 12500618 chr2L 12500698 12500744 12 125 8.5 12.5 10.5 1.0 172 chr2L 12500572 intron bun - chr2L 12500658 intron bun - chr2L 12500744 intron bun - chr2L_12_12500001 chr2L_12500001 RAL-900_125b 483 chr2L 12529192 12529255 chr2L 12529394 12529457 20 202 8.0 7.5 7.8 2.3 265 chr2L 12529192 intron bun - chr2L 12529324 intron bun - chr2L 12529457 intron bun - chr2L_20_12525001 chr2L_12525001 RAL-900_125b 484 chr2L 12547417 12547455 chr2L 12547551 12547574 15 133 4.5 0.0 2.2 4.7 157 chr2L 12547417 intergenic not near genes chr2L 12547496 intergenic not near genes chr2L 12547574 intergenic not near genes chr2L_15_12545001 chr2L_12545001 RAL-900_125b 485 chr2L 12558274 12558348 chr2L 12565453 12565527 HMS-Beagle 38 7176 8.5 9.0 8.8 3.9 7253 chr2L 12558274 intergenic not near genes chr2L 12561900 intergenic not near genes chr2L 12565527 intergenic not near genes chr2L_38_12560001 chr2L_12560001 RAL-900_125b 486 chr2L 12619859 12619902 chr2L 12619979 12620028 18 123 15.5 7.0 11.2 1.5 169 chr2L 12619859 intron,intron nub +,Ref2 - chr2L 12619944 intron,intron nub +,Ref2 - chr2L 12620028 intron,intron nub +,Ref2 - chr2L_18_12615001 chr2L_12615001 RAL-900_125b 487 chr2L 12731016 12731028 chr2L 12735833 12735844 F-element 4 4817 23.5 7.0 15.2 0.2 4828 chr2L 12731016 intron MRP + chr2L 12733430 intron MRP + chr2L 12735844 intron MRP + chr2L_4_12730001 chr2L_12730001 RAL-900_125b 488 chr2L 12731030 12731081 chr2L 12735831 12735898 F-element 25 4815 10.0 6.5 8.2 2.7 4868 chr2L 12731030 intron MRP + chr2L 12733464 intron MRP + chr2L 12735898 intron MRP + chr2L_25_12730001 chr2L_12730001 RAL-900_125b 489 chr2L 12739129 12739196 chr2L 12743960 12744027 Doc 32 4830 8.5 10.5 9.5 3.0 4898 chr2L 12739129 exon MRP + chr2L 12741578 intron MRP + chr2L 12744027 exon MRP + chr2L_32_12740001 chr2L_12740001 RAL-900_125b 490 chr2L 12763781 12763869 chr2L 12764041 12764131 BS 21 260 0.0 0.0 0.0 21.0 350 chr2L 12763781 intergenic not near genes chr2L 12763956 intergenic not near genes chr2L 12764131 intergenic not near genes chr2L_21_12760001 chr2L_12760001 RAL-900_125b 491 chr2L 12781759 12781815 chr2L 12789252 12789308 Quasimodo 18 7493 16.5 9.0 12.8 1.3 7549 chr2L 12781759 intergenic not near genes chr2L 12785534 intergenic not near genes chr2L 12789308 intergenic not near genes chr2L_18_12785001 chr2L_12785001 RAL-900_125b 492 chr2L 12791568 12791575 chr2L 12795293 12795300 F-element 4 3725 25.0 16.5 20.8 0.2 3732 chr2L 12791568 intergenic not near genes chr2L 12793434 intergenic not near genes chr2L 12795300 intergenic not near genes chr2L_4_12790001 chr2L_12790001 RAL-900_125b 493 chr2L 12791577 12791625 chr2L 12795292 12795350 F-element 26 3723 10.5 16.0 13.2 1.8 3773 chr2L 12791577 intergenic not near genes chr2L 12793464 intergenic not near genes chr2L 12795350 intergenic not near genes chr2L_26_12790001 chr2L_12790001 RAL-900_125b 494 chr2L 12835507 12835586 chr2L 12835666 12835745 34 158 5.5 5.0 5.2 5.5 238 chr2L 12835507 intergenic not near genes chr2L 12835626 intergenic not near genes chr2L 12835745 intergenic not near genes chr2L_34_12835001 chr2L_12835001 RAL-900_125b 495 chr2L 12861655 12861718 chr2L 12863172 12863235 hobo 26 1514 7.5 6.5 7.0 3.2 1580 chr2L 12861655 intergenic not near genes chr2L 12862445 intergenic not near genes chr2L 12863235 intergenic not near genes chr2L_26_12860001 chr2L_12860001 RAL-900_125b 496 chr2L 12893985 12894042 chr2L 12895501 12895547 hobo 13 1512 10.0 12.0 11.0 1.1 1562 chr2L 12893985 intergenic not near genes chr2L 12894766 intergenic not near genes chr2L 12895547 intergenic not near genes chr2L_13_12890001 chr2L_12890001 RAL-900_125b 497 chr2L 12905428 12905497 chr2L 12905562 12905630 24 134 12.0 9.0 10.5 2.1 202 chr2L 12905428 intergenic not near genes chr2L 12905529 intergenic not near genes chr2L 12905630 intergenic not near genes chr2L_24_12905001 chr2L_12905001 RAL-900_125b 498 chr2L 12933805 12933882 chr2L 12941322 12941389 blood 24 7515 5.5 7.5 6.5 3.2 7584 chr2L 12933805 intergenic not near genes chr2L 12937597 intergenic not near genes chr2L 12941389 intergenic not near genes chr2L_24_12935001 chr2L_12935001 RAL-900_125b 499 chr2L 12945937 12946001 chr2L 12946067 12946131 22 129 8.0 6.0 7.0 2.8 194 chr2L 12945937 intergenic not near genes chr2L 12946034 intergenic not near genes chr2L 12946131 intergenic not near genes chr2L_22_12945001 chr2L_12945001 RAL-900_125b 500 chr2L 13143985 13144052 chr2L 13144508 13144575 21 522 8.5 3.5 6.0 3.0 590 chr2L 13143985 intergenic CG16978 - chr2L 13144280 intergenic not near genes chr2L 13144575 intergenic not near genes chr2L_21_13140001 chr2L_13140001 RAL-900_125b 501 chr2L 13215340 13215404 chr2L 13215665 13215729 30 325 11.5 9.0 10.2 2.7 389 chr2L 13215340 5` UTR kek4 - chr2L 13215534 intergenic kek4 -,snRNA:U2:34ABb +,snRNA:U2:34ABc + chr2L 13215729 intergenic snRNA:U2:34ABb +,snRNA:U2:34ABc +,kek4 - chr2L_30_13215001 chr2L_13215001 RAL-900_125b 502 chr2L 13321856 13321925 chr2L 13321995 13321998 20 133 12.5 9.0 10.8 1.7 142 chr2L 13321856 intron CG43778 - chr2L 13321927 intron CG43778 - chr2L 13321998 intron CG43778 - chr2L_20_13320001 chr2L_13320001 RAL-900_125b 503 chr2L 13398670 13398744 chr2L 13398800 13398874 31 130 11.0 9.5 10.2 2.8 204 chr2L 13398670 intergenic CG10859 -,CR44600 -,CG7110 + chr2L 13398772 intergenic CR44600 -,CG10859 -,CG7110 + chr2L 13398874 3` UTR CR44600 - chr2L_31_13395001 chr2L_13395001 RAL-900_125b 504 chr2L 13405606 13405670 chr2L 13410453 13410517 Doc 35 4845 9.5 13.5 11.5 2.8 4911 chr2L 13405606 exon CG7110 + chr2L 13408062 intron CG7110 + chr2L 13410517 exon CG7110 + chr2L_35_13405001 chr2L_13405001 RAL-900_125b 505 chr2L 13435194 13435273 chr2L 13435386 13435465 21 192 9.5 9.5 9.5 2.0 271 chr2L 13435194 intron CG42784 + chr2L 13435330 intron CG42784 + chr2L 13435465 intron CG42784 + chr2L_21_13435001 chr2L_13435001 RAL-900_125b 506 chr2L 13437298 13437377 chr2L 13437429 13437511 30 133 7.0 0.0 3.5 6.7 213 chr2L 13437298 intron,intron CG42784 +,Tehao + chr2L 13437404 intron,intron CG42784 +,Tehao + chr2L 13437511 intron,intron CG42784 +,Tehao + chr2L_30_13435001 chr2L_13435001 RAL-900_125b 507 chr2L 13449424 13449485 chr2L 13456910 13456971 Quasimodo 24 7486 9.5 14.5 12.0 1.8 7547 chr2L 13449424 intron,intron CG42784 +,Hsp60D - chr2L 13453198 intron CG42784 + chr2L 13456971 intron CG42784 + chr2L_24_13450001 chr2L_13450001 RAL-900_125b 508 chr2L 13472915 13472949 chr2L 13473218 13473252 14 301 10.0 4.0 7.0 1.8 337 chr2L 13472915 intron CG42784 + chr2L 13473084 intron CG42784 + chr2L 13473252 intron CG42784 + chr2L_14_13470001 chr2L_13470001 RAL-900_125b 509 chr2L 13472951 13472985 chr2L 13473214 13473288 17 298 4.0 3.0 3.5 3.8 337 chr2L 13472951 intron CG42784 + chr2L 13473120 intron CG42784 + chr2L 13473288 intron CG42784 + chr2L_17_13470001 chr2L_13470001 RAL-900_125b 510 chr2L 13481414 13481466 chr2L 13482071 13482123 jockey 21 657 14.0 10.0 12.0 1.6 709 chr2L 13481414 intron CG42784 + chr2L 13481768 intron CG42784 + chr2L 13482123 intron CG42784 + chr2L_21_13480001 chr2L_13480001 RAL-900_125b 511 chr2L 13522247 13522285 chr2L 13527593 13527620 Transpac 15 5354 10.0 17.0 13.5 1.0 5373 chr2L 13522247 intron B4 - chr2L 13524934 intron B4 - chr2L 13527620 intron B4 - chr2L_15_13520001 chr2L_13520001 RAL-900_125b 512 chr2L 13560358 13560420 chr2L 13565229 13565291 F-element 25 4871 16.0 10.5 13.2 1.8 4933 chr2L 13560358 intron kuz + chr2L 13562824 intron kuz + chr2L 13565291 intron kuz + chr2L_25_13560001 chr2L_13560001 RAL-900_125b 513 chr2L 13571646 13571699 chr2L 13571775 13571829 13 128 8.5 4.5 6.5 1.7 183 chr2L 13571646 intron kuz + chr2L 13571738 intron kuz + chr2L 13571829 intron kuz + chr2L_13_13570001 chr2L_13570001 RAL-900_125b 514 chr2L 13571703 13571722 chr2L 13571765 13571812 8 116 7.0 5.5 6.2 1.1 109 chr2L 13571703 intron kuz + chr2L 13571758 intron kuz + chr2L 13571812 intron kuz + chr2L_8_13570001 chr2L_13570001 RAL-900_125b 515 chr2L 13621590 13621653 chr2L 13621747 13621810 29 155 8.5 7.0 7.8 3.3 220 chr2L 13621590 intron kuz + chr2L 13621700 intron kuz + chr2L 13621810 intron kuz + chr2L_29_13620001 chr2L_13620001 RAL-900_125b 516 chr2L 13701847 13701903 chr2L 13701977 13702033 19 130 11.5 11.0 11.2 1.6 186 chr2L 13701847 intron CG31814 - chr2L 13701940 intron CG31814 - chr2L 13702033 intron CG31814 - chr2L_19_13700001 chr2L_13700001 RAL-900_125b 517 chr2L 13720197 13720214 chr2L 13720335 13720352 6 138 17.0 0.5 8.8 0.6 155 chr2L 13720197 intergenic not near genes chr2L 13720274 intergenic not near genes chr2L 13720352 intergenic not near genes chr2L_6_13720001 chr2L_13720001 RAL-900_125b 518 chr2L 13740031 13740089 chr2L 13740154 13740219 13 128 1.0 3.0 2.0 4.3 188 chr2L 13740031 intergenic not near genes chr2L 13740125 intergenic not near genes chr2L 13740219 intergenic not near genes chr2L_13_13740001 chr2L_13740001 RAL-900_125b 519 chr2L 13754681 13754685 chr2L 13754820 13754824 4 139 12.0 0.0 6.0 0.6 143 chr2L 13754681 intron,intron CR44846 +,TM9SF4 + chr2L 13754752 intron,intron CR44846 +,TM9SF4 + chr2L 13754824 intron,intron CR44846 +,TM9SF4 + chr2L_4_13750001 chr2L_13750001 RAL-900_125b 520 chr2L 13761241 13761313 chr2L 13761374 13761446 31 126 5.0 7.0 6.0 4.4 205 chr2L 13761241 intron TM9SF4 + chr2L 13761344 intron TM9SF4 + chr2L 13761446 intron TM9SF4 + chr2L_31_13760001 chr2L_13760001 RAL-900_125b 521 chr2L 13761767 13761827 chr2L 13762928 13762988 Doc 40 1161 9.0 12.5 10.8 3.4 1221 chr2L 13761767 intron TM9SF4 + chr2L 13762378 intron TM9SF4 + chr2L 13762988 intron TM9SF4 + chr2L_40_13760001 chr2L_13760001 RAL-900_125b 522 chr2L 13794655 13794728 chr2L 13794805 13794863 34 149 9.0 9.5 9.2 3.3 208 chr2L 13794655 intron Sec71 + chr2L 13794759 intron Sec71 + chr2L 13794863 intron Sec71 + chr2L_34_13790001 chr2L_13790001 RAL-900_125b 523 chr2L 13802799 13802827 chr2L 13802928 13802956 7 129 11.0 9.0 10.0 0.6 157 chr2L 13802799 intergenic not near genes chr2L 13802878 intergenic not near genes chr2L 13802956 intergenic not near genes chr2L_7_13800001 chr2L_13800001 RAL-900_125b 524 chr2L 13853045 13853106 chr2L 13862245 13862306 roo 37 9200 5.0 7.5 6.2 5.1 9261 chr2L 13853045 intron CenG1A + chr2L 13857676 intron CenG1A + chr2L 13862306 intron CenG1A + chr2L_37_13855001 chr2L_13855001 RAL-900_125b 525 chr2L 13988234 13988301 chr2L 13988371 13988438 27 137 9.5 9.5 9.5 2.6 204 chr2L 13988234 intron rk - chr2L 13988336 intron rk - chr2L 13988438 intron rk - chr2L_27_13985001 chr2L_13985001 RAL-900_125b 526 chr2L 14026707 14026753 chr2L 14026843 14026889 21 136 6.0 8.0 7.0 2.6 182 chr2L 14026707 intergenic CG4500 + chr2L 14026798 intergenic CG4500 + chr2L 14026889 intergenic CG4500 + chr2L_21_14025001 chr2L_14025001 RAL-900_125b 527 chr2L 14056759 14056836 chr2L 14056895 14056955 37 132 5.5 8.0 6.8 4.7 196 chr2L 14056759 intron nAChRalpha5 + chr2L 14056857 intron nAChRalpha5 + chr2L 14056955 intron nAChRalpha5 + chr2L_37_14055001 chr2L_14055001 RAL-900_125b 528 chr2L 14068544 14068557 chr2L 14068690 14068703 4 144 21.0 0.0 10.5 0.3 159 chr2L 14068544 intron nAChRalpha5 + chr2L 14068624 intron nAChRalpha5 + chr2L 14068703 intron nAChRalpha5 + chr2L_4_14065001 chr2L_14065001 RAL-900_125b 529 chr2L 14068558 14068569 chr2L 14068688 14068704 4 132 18.0 0.0 9.0 0.4 146 chr2L 14068558 intron nAChRalpha5 + chr2L 14068631 intron nAChRalpha5 + chr2L 14068704 intron nAChRalpha5 + chr2L_4_14065001 chr2L_14065001 RAL-900_125b 530 chr2L 14068579 14068623 chr2L 14068686 14068769 11 134 8.0 0.0 4.0 2.2 190 chr2L 14068579 intron nAChRalpha5 + chr2L 14068674 intron nAChRalpha5 + chr2L 14068769 intron nAChRalpha5 + chr2L_11_14065001 chr2L_14065001 RAL-900_125b 531 chr2L 14096109 14096139 chr2L 14096251 14096261 8 139 13.0 0.0 6.5 1.1 152 chr2L 14096109 intergenic not near genes chr2L 14096185 intergenic not near genes chr2L 14096261 intergenic not near genes chr2L_8_14095001 chr2L_14095001 RAL-900_125b 532 chr2L 14109473 14109512 chr2L 14109614 14109653 15 141 17.5 8.0 12.8 1.1 180 chr2L 14109473 intergenic CG15293 -,CG31769 - chr2L 14109563 intergenic CG31769 -,CG15293 - chr2L 14109653 3` UTR CG31769 - chr2L_15_14105001 chr2L_14105001 RAL-900_125b 533 chr2L 14109514 14109530 chr2L 14109608 14109671 9 136 14.5 6.5 10.5 0.8 157 chr2L 14109514 intergenic CG15293 -,CG31769 - chr2L 14109592 intergenic CG31769 -,CG15293 - chr2L 14109671 3` UTR CG31769 - chr2L_9_14105001 chr2L_14105001 RAL-900_125b 534 chr2L 14160644 14160711 chr2L 14160780 14160847 36 135 9.5 8.5 9.0 3.6 203 chr2L 14160644 intergenic CG17341 +,CG43332 - chr2L 14160746 intergenic CG17341 +,CG43332 - chr2L 14160847 intergenic CG17341 +,CG43332 - chr2L_36_14160001 chr2L_14160001 RAL-900_125b 535 chr2L 14162126 14162126 chr2L 14162250 14162270 4 126 7.0 21.5 14.2 0.3 144 chr2L 14162126 exon CG43332 - chr2L 14162198 exon CG43332 - chr2L 14162270 exon CG43332 - chr2L_4_14160001 chr2L_14160001 RAL-900_125b 536 chr2L 14180016 14180092 chr2L 14180142 14180218 39 126 8.5 7.5 8.0 4.3 202 chr2L 14180016 intron CG43333 - chr2L 14180117 intron CG43333 - chr2L 14180218 exon CG43333 - chr2L_39_14180001 chr2L_14180001 RAL-900_125b 537 chr2L 14234419 14234463 chr2L 14234556 14234589 5 133 0.0 12.0 6.0 0.7 170 chr2L 14234419 intergenic Dyrk2 -,CR44727 + chr2L 14234504 intergenic CR44727 +,Dyrk2 - chr2L 14234589 intergenic CR44727 +,Dyrk2 - chr2L_5_14230001 chr2L_14230001 RAL-900_125b 538 chr2L 14246235 14246315 chr2L 14246362 14246452 19 133 6.0 4.0 5.0 3.2 217 chr2L 14246235 intergenic not near genes chr2L 14246344 intergenic not near genes chr2L 14246452 intergenic not near genes chr2L_19_14245001 chr2L_14245001 RAL-900_125b 539 chr2L 14301712 14301749 chr2L 14301846 14301883 12 133 12.5 0.5 6.5 1.6 171 chr2L 14301712 intron wb + chr2L 14301798 intron wb + chr2L 14301883 intron wb + chr2L_12_14300001 chr2L_14300001 RAL-900_125b 540 chr2L 14333859 14333929 chr2L 14334008 14334079 19 150 5.0 7.5 6.2 2.6 220 chr2L 14333859 3` UTR ms(2)34Fe + chr2L 14333969 intergenic ms(2)34Fe +,CG33090 + chr2L 14334079 intergenic CG33090 +,ms(2)34Fe + chr2L_19_14330001 chr2L_14330001 RAL-900_125b 541 chr2L 14340497 14340560 chr2L 14340629 14340658 10 128 2.0 7.5 4.8 1.7 161 chr2L 14340497 intron CG33090 + chr2L 14340578 intron CG33090 + chr2L 14340658 intron CG33090 + chr2L_10_14340001 chr2L_14340001 RAL-900_125b 542 chr2L 14369086 14369161 chr2L 14369252 14369278 30 164 10.0 14.0 12.0 2.3 192 chr2L 14369086 intergenic not near genes chr2L 14369182 intergenic not near genes chr2L 14369278 intergenic not near genes chr2L_30_14365001 chr2L_14365001 RAL-900_125b 543 chr2L 14374728 14374801 chr2L 14374869 14374942 28 140 11.5 4.5 8.0 3.1 214 chr2L 14374728 intergenic not near genes chr2L 14374835 intergenic not near genes chr2L 14374942 intergenic not near genes chr2L_28_14370001 chr2L_14370001 RAL-900_125b 544 chr2L 14378601 14378680 chr2L 14378730 14378807 21 126 7.5 5.5 6.5 2.8 206 chr2L 14378601 3` UTR ppk - chr2L 14378704 3` UTR ppk - chr2L 14378807 3` UTR ppk - chr2L_21_14375001 chr2L_14375001 RAL-900_125b 545 chr2L 14393838 14393851 chr2L 14394026 14394040 5 189 10.0 11.5 10.8 0.4 202 chr2L 14393838 intron elB - chr2L 14393939 intron elB - chr2L 14394040 intron elB - chr2L_5_14390001 chr2L_14390001 RAL-900_125b 546 chr2L 14462678 14462822 chr2L 14462815 14462968 10 140 0.0 0.0 0.0 10.0 290 chr2L 14462678 intergenic not near genes chr2L 14462823 intergenic not near genes chr2L 14462968 intergenic not near genes chr2L_10_14460001 chr2L_14460001 RAL-900_125b 547 chr2L 14503385 14503431 chr2L 14503514 14503560 19 128 7.0 5.0 6.0 2.7 175 chr2L 14503385 intergenic not near genes chr2L 14503472 intergenic not near genes chr2L 14503560 intergenic not near genes chr2L_19_14500001 chr2L_14500001 RAL-900_125b 548 chr2L 14504284 14504352 chr2L 14504423 14504491 32 138 15.0 10.5 12.8 2.3 207 chr2L 14504284 intergenic not near genes chr2L 14504388 intergenic not near genes chr2L 14504491 intergenic not near genes chr2L_32_14500001 chr2L_14500001 RAL-900_125b 549 chr2L 14524573 14524640 chr2L 14525121 14525188 37 547 6.0 7.5 6.8 4.7 615 chr2L 14524573 exon CG33648 + chr2L 14524880 intron CG33648 + chr2L 14525188 intron CG33648 + chr2L_37_14520001 chr2L_14520001 RAL-900_125b 550 chr2L 14570683 14570721 chr2L 14570814 14570852 14 131 0.5 11.0 5.8 2.1 169 chr2L 14570683 intergenic not near genes chr2L 14570768 intergenic not near genes chr2L 14570852 intergenic not near genes chr2L_14_14570001 chr2L_14570001 RAL-900_125b 551 chr2L 14588341 14588407 chr2L 14588545 14588611 30 202 1.5 14.0 7.8 3.4 270 chr2L 14588341 intergenic CG42680 - chr2L 14588476 intergenic CG42680 - chr2L 14588611 intergenic CG42680 - chr2L_30_14585001 chr2L_14585001 RAL-900_125b 552 chr2L 14588650 14588672 chr2L 14588991 14589013 18 341 8.5 10.5 9.5 1.7 363 chr2L 14588650 intergenic CG42680 - chr2L 14588832 intergenic not near genes chr2L 14589013 intergenic not near genes chr2L_18_14585001 chr2L_14585001 RAL-900_125b 553 chr2L 14596898 14596960 chr2L 14597046 14597108 39 148 12.0 6.5 9.2 3.8 210 chr2L 14596898 intergenic not near genes chr2L 14597003 intergenic not near genes chr2L 14597108 intergenic not near genes chr2L_39_14595001 chr2L_14595001 RAL-900_125b 554 chr2L 14613388 14613427 chr2L 14613739 14613765 7 345 19.0 9.0 14.0 0.5 377 chr2L 14613388 intron,5` UTR osp -,CR43411 + chr2L 14613576 intron,5` UTR osp -,CR43411 + chr2L 14613765 intron osp - chr2L_7_14610001 chr2L_14610001 RAL-900_125b 555 chr2L 14621328 14621402 chr2L 14621478 14621543 35 147 8.5 10.0 9.2 3.4 215 chr2L 14621328 intron osp - chr2L 14621436 intron osp - chr2L 14621543 intron osp - chr2L_35_14620001 chr2L_14620001 RAL-900_125b 556 chr2L 14624527 14624560 chr2L 14624656 14624689 13 128 10.0 11.0 10.5 1.1 162 chr2L 14624527 intron osp - chr2L 14624608 intron osp - chr2L 14624689 intron osp - chr2L_13_14620001 chr2L_14620001 RAL-900_125b 557 chr2L 14642530 14642593 chr2L 14651743 14651806 roo 24 9213 7.5 8.5 8.0 2.7 9276 chr2L 14642530 intron osp - chr2L 14647168 intron osp - chr2L 14651806 intron osp - chr2L_24_14645001 chr2L_14645001 RAL-900_125b 558 chr2L 14658878 14658944 chr2L 14659011 14659068 36 131 13.5 10.5 12.0 2.8 190 chr2L 14658878 intron osp - chr2L 14658973 intron osp - chr2L 14659068 intron osp - chr2L_36_14655001 chr2L_14655001 RAL-900_125b 559 chr2L 14707163 14707235 chr2L 14707332 14707403 19 168 6.0 0.0 3.0 4.8 240 chr2L 14707163 intergenic not near genes chr2L 14707283 intergenic not near genes chr2L 14707403 intergenic not near genes chr2L_19_14705001 chr2L_14705001 RAL-900_125b 560 chr2L 14716556 14716631 chr2L 14716683 14716760 33 126 7.0 2.0 4.5 6.0 204 chr2L 14716556 intergenic not near genes chr2L 14716658 intergenic not near genes chr2L 14716760 intergenic not near genes chr2L_33_14715001 chr2L_14715001 RAL-900_125b 561 chr2L 14747709 14747773 chr2L 14747859 14747914 4 136 0.0 10.5 5.2 0.6 205 chr2L 14747709 intergenic not near genes chr2L 14747812 intergenic not near genes chr2L 14747914 intergenic not near genes chr2L_4_14745001 chr2L_14745001 RAL-900_125b 562 chr2L 14769312 14769386 chr2L 14769521 14769595 33 209 5.0 7.5 6.2 4.6 283 chr2L 14769312 intergenic not near genes chr2L 14769454 intergenic not near genes chr2L 14769595 intergenic not near genes chr2L_33_14765001 chr2L_14765001 RAL-900_125b 563 chr2L 14772658 14772719 chr2L 14772807 14772868 19 149 10.5 8.5 9.5 1.8 210 chr2L 14772658 intergenic not near genes chr2L 14772763 intergenic not near genes chr2L 14772868 intergenic not near genes chr2L_19_14770001 chr2L_14770001 RAL-900_125b 564 chr2L 14803832 14803905 chr2L 14809085 14809158 copia 28 5252 6.0 8.5 7.2 3.4 5326 chr2L 14803832 intergenic not near genes chr2L 14806495 intergenic not near genes chr2L 14809158 intergenic not near genes chr2L_28_14805001 chr2L_14805001 RAL-900_125b 565 chr2L 14819170 14819208 chr2L 14819306 14819344 9 129 9.5 10.5 10.0 0.8 174 chr2L 14819170 intergenic not near genes chr2L 14819257 intergenic not near genes chr2L 14819344 intergenic not near genes chr2L_9_14815001 chr2L_14815001 RAL-900_125b 566 chr2L 14839705 14839774 chr2L 14839831 14839900 21 126 11.5 11.0 11.2 1.7 195 chr2L 14839705 intergenic not near genes chr2L 14839802 intergenic not near genes chr2L 14839900 intergenic not near genes chr2L_21_14835001 chr2L_14835001 RAL-900_125b 567 chr2L 14840932 14840996 chr2L 14841070 14841133 24 137 10.0 11.0 10.5 2.1 201 chr2L 14840932 3` UTR CR43805 - chr2L 14841032 3` UTR CR43805 - chr2L 14841133 3` UTR CR43805 - chr2L_24_14840001 chr2L_14840001 RAL-900_125b 568 chr2L 14849232 14849284 chr2L 14849372 14849424 20 140 13.5 0.0 6.8 2.6 192 chr2L 14849232 intron CG15279 - chr2L 14849328 intron CG15279 - chr2L 14849424 intron CG15279 - chr2L_20_14845001 chr2L_14845001 RAL-900_125b 569 chr2L 14887646 14887687 chr2L 14887774 14887815 23 128 7.5 6.0 6.8 2.9 169 chr2L 14887646 intergenic not near genes chr2L 14887730 intergenic not near genes chr2L 14887815 intergenic not near genes chr2L_23_14885001 chr2L_14885001 RAL-900_125b 570 chr2L 14984342 14984398 chr2L 14991994 14992045 opus 19 7652 16.5 11.5 14.0 1.3 7703 chr2L 14984342 intron mol - chr2L 14988194 intron mol - chr2L 14992045 intron mol - chr2L_19_14985001 chr2L_14985001 RAL-900_125b 571 chr2L 15013102 15013177 chr2L 15013256 15013335 27 155 3.5 7.5 5.5 4.2 233 chr2L 15013102 intergenic CR43856 - chr2L 15013218 intergenic not near genes chr2L 15013335 intergenic not near genes chr2L_27_15010001 chr2L_15010001 RAL-900_125b 572 chr2L 15031507 15031587 chr2L 15031797 15031874 25 287 7.5 5.5 6.5 3.3 367 chr2L 15031507 intron,exon GABA-B-R1 +,CG31832 - chr2L 15031690 intron,exon GABA-B-R1 +,CG31832 - chr2L 15031874 intron GABA-B-R1 + chr2L_25_15030001 chr2L_15030001 RAL-900_125b 573 chr2L 15044660 15044734 chr2L 15044786 15044866 22 127 11.5 2.0 6.8 2.8 206 chr2L 15044660 intergenic ck - chr2L 15044763 intergenic ck - chr2L 15044866 intergenic ck - chr2L_22_15040001 chr2L_15040001 RAL-900_125b 574 chr2L 15072300 15072309 chr2L 15072435 15072451 10 141 15.5 10.0 12.8 0.7 151 chr2L 15072300 intron vas + chr2L 15072376 exon vas + chr2L 15072451 exon vas + chr2L_10_15070001 chr2L_15070001 RAL-900_125b 575 chr2L 15078019 15078096 chr2L 15078157 15078234 48 137 6.5 7.5 7.0 6.0 215 chr2L 15078019 intron CG15270 + chr2L 15078126 intron CG15270 + chr2L 15078234 intron CG15270 + chr2L_48_15075001 chr2L_15075001 RAL-900_125b 576 chr2L 15098488 15098541 chr2L 15098618 15098671 22 127 8.0 0.5 4.2 4.2 183 chr2L 15098488 intergenic not near genes chr2L 15098580 intergenic not near genes chr2L 15098671 intergenic not near genes chr2L_22_15095001 chr2L_15095001 RAL-900_125b 577 chr2L 15103827 15103856 chr2L 15103963 15104003 9 145 11.5 12.0 11.8 0.7 176 chr2L 15103827 intergenic not near genes chr2L 15103915 intergenic not near genes chr2L 15104003 intergenic not near genes chr2L_9_15100001 chr2L_15100001 RAL-900_125b 578 chr2L 15108446 15108531 chr2L 15108639 15108723 19 193 3.0 5.5 4.2 3.7 277 chr2L 15108446 intergenic not near genes chr2L 15108584 intergenic not near genes chr2L 15108723 intergenic not near genes chr2L_19_15105001 chr2L_15105001 RAL-900_125b 579 chr2L 15122726 15122805 chr2L 15122856 15122936 31 130 3.5 3.0 3.2 7.4 210 chr2L 15122726 intergenic not near genes chr2L 15122831 intergenic not near genes chr2L 15122936 intergenic not near genes chr2L_31_15120001 chr2L_15120001 RAL-900_125b 580 chr2L 15158697 15158717 chr2L 15158826 15158845 11 128 15.5 5.5 10.5 1.0 148 chr2L 15158697 intergenic not near genes chr2L 15158771 intergenic not near genes chr2L 15158845 intergenic not near genes chr2L_11_15155001 chr2L_15155001 RAL-900_125b 581 chr2L 15161202 15161273 chr2L 15161388 15161459 28 185 8.5 7.0 7.8 3.2 257 chr2L 15161202 intergenic CR44770 + chr2L 15161330 intergenic CR44770 + chr2L 15161459 intergenic CR44770 +,CG4168 - chr2L_28_15160001 chr2L_15160001 RAL-900_125b 582 chr2L 15227672 15227702 chr2L 15227793 15227808 10 128 13.5 7.5 10.5 0.9 136 chr2L 15227672 intergenic not near genes chr2L 15227740 intergenic not near genes chr2L 15227808 intergenic not near genes chr2L_10_15225001 chr2L_15225001 RAL-900_125b 583 chr2L 15227711 15227721 chr2L 15227790 15227835 5 118 9.5 7.0 8.2 0.5 124 chr2L 15227711 intergenic not near genes chr2L 15227773 intergenic not near genes chr2L 15227835 intergenic not near genes chr2L_5_15225001 chr2L_15225001 RAL-900_125b 584 chr2L 15240177 15240252 chr2L 15240338 15240413 30 160 6.0 7.5 6.8 3.8 236 chr2L 15240177 intron ZnT35C - chr2L 15240295 intron ZnT35C - chr2L 15240413 intron ZnT35C - chr2L_30_15240001 chr2L_15240001 RAL-900_125b 585 chr2L 15245385 15245464 chr2L 15245515 15245569 17 120 9.5 7.5 8.5 1.8 184 chr2L 15245385 intron ZnT35C - chr2L 15245477 intron ZnT35C - chr2L 15245569 intron ZnT35C - chr2L_17_15245001 chr2L_15245001 RAL-900_125b 586 chr2L 15249734 15249740 chr2L 15249867 15249873 INE-1 4 133 19.5 11.0 15.2 0.2 139 chr2L 15249734 intron dao + chr2L 15249804 intron dao + chr2L 15249873 intron dao + chr2L_4_15245001 chr2L_15245001 RAL-900_125b 587 chr2L 15287377 15287386 chr2L 15287510 15287519 6 133 13.0 0.0 6.5 0.8 142 chr2L 15287377 intergenic not near genes chr2L 15287448 intergenic not near genes chr2L 15287519 intergenic not near genes chr2L_6_15285001 chr2L_15285001 RAL-900_125b 588 chr2L 15309406 15309445 chr2L 15309623 15309662 12 217 22.5 5.0 13.8 0.8 256 chr2L 15309406 intergenic not near genes chr2L 15309534 intergenic not near genes chr2L 15309662 intergenic not near genes chr2L_12_15305001 chr2L_15305001 RAL-900_125b 589 chr2L 15343494 15343568 chr2L 15343629 15343710 10 136 6.0 0.0 3.0 2.5 216 chr2L 15343494 intergenic not near genes chr2L 15343602 intergenic not near genes chr2L 15343710 intergenic not near genes chr2L_10_15340001 chr2L_15340001 RAL-900_125b 590 chr2L 15350853 15350926 chr2L 15350987 15351060 30 134 5.5 9.5 7.5 3.5 207 chr2L 15350853 intergenic not near genes chr2L 15350956 intergenic not near genes chr2L 15351060 intergenic not near genes chr2L_30_15350001 chr2L_15350001 RAL-900_125b 591 chr2L 15375769 15375845 chr2L 15375930 15376007 38 162 6.0 4.5 5.2 6.1 238 chr2L 15375769 intergenic not near genes chr2L 15375888 intergenic not near genes chr2L 15376007 intergenic not near genes chr2L_38_15375001 chr2L_15375001 RAL-900_125b 592 chr2L 15382206 15382245 chr2L 15382336 15382375 16 130 10.0 5.5 7.8 1.8 169 chr2L 15382206 intergenic not near genes chr2L 15382290 intergenic not near genes chr2L 15382375 intergenic not near genes chr2L_16_15380001 chr2L_15380001 RAL-900_125b 593 chr2L 15387367 15387407 chr2L 15387497 15387516 14 128 3.5 11.0 7.2 1.7 149 chr2L 15387367 intergenic not near genes chr2L 15387442 intergenic not near genes chr2L 15387516 intergenic not near genes chr2L_14_15385001 chr2L_15385001 RAL-900_125b 594 chr2L 15394125 15394149 chr2L 15394265 15394284 9 139 12.5 0.0 6.2 1.2 159 chr2L 15394125 intergenic not near genes chr2L 15394204 intergenic not near genes chr2L 15394284 intergenic not near genes chr2L_9_15390001 chr2L_15390001 RAL-900_125b 595 chr2L 15408609 15408628 chr2L 15408807 15408826 6 195 16.5 8.0 12.2 0.5 217 chr2L 15408609 intergenic not near genes chr2L 15408718 intergenic not near genes chr2L 15408826 intergenic not near genes chr2L_6_15405001 chr2L_15405001 RAL-900_125b 596 chr2L 15408632 15408641 chr2L 15408804 15408839 4 187 13.5 6.5 10.0 0.4 207 chr2L 15408632 intergenic not near genes chr2L 15408736 intergenic not near genes chr2L 15408839 intergenic not near genes chr2L_4_15405001 chr2L_15405001 RAL-900_125b 597 chr2L 15408643 15408688 chr2L 15408803 15408876 31 185 6.5 6.5 6.5 4.1 233 chr2L 15408643 intergenic not near genes chr2L 15408760 intergenic not near genes chr2L 15408876 intergenic not near genes chr2L_31_15405001 chr2L_15405001 RAL-900_125b 598 chr2L 15446029 15446075 chr2L 15453548 15453594 blood 27 7518 8.5 11.5 10.0 2.5 7565 chr2L 15446029 intergenic not near genes chr2L 15449812 intergenic not near genes chr2L 15453594 intergenic not near genes chr2L_27_15445001 chr2L_15445001 RAL-900_125b 599 chr2L 15497342 15497373 chr2L 15497501 15497532 12 156 13.5 10.5 12.0 0.9 190 chr2L 15497342 intergenic not near genes chr2L 15497437 intergenic not near genes chr2L 15497532 intergenic not near genes chr2L_12_15495001 chr2L_15495001 RAL-900_125b 600 chr2L 15497375 15497412 chr2L 15497499 15497571 17 149 8.5 10.5 9.5 1.6 196 chr2L 15497375 intergenic not near genes chr2L 15497473 intergenic not near genes chr2L 15497571 intergenic not near genes chr2L_17_15495001 chr2L_15495001 RAL-900_125b 601 chr2L 15535849 15535910 chr2L 15535979 15536050 29 140 8.0 9.0 8.5 3.1 201 chr2L 15535849 intergenic not near genes chr2L 15535950 intergenic not near genes chr2L 15536050 intergenic not near genes chr2L_29_15535001 chr2L_15535001 RAL-900_125b 602 chr2L 15586372 15586428 chr2L 15593474 15593530 297 32 7102 10.0 8.0 9.0 3.2 7158 chr2L 15586372 intergenic not near genes chr2L 15589951 intergenic not near genes chr2L 15593530 intergenic not near genes chr2L_32_15585001 chr2L_15585001 RAL-900_125b 603 chr2L 15636625 15636695 chr2L 15636751 15636822 22 126 6.0 3.0 4.5 4.0 197 chr2L 15636625 intergenic not near genes chr2L 15636724 intergenic not near genes chr2L 15636822 intergenic not near genes chr2L_22_15635001 chr2L_15635001 RAL-900_125b 604 chr2L 15730840 15730888 chr2L 15730975 15731023 19 135 6.0 8.0 7.0 2.4 183 chr2L 15730840 intron CycE - chr2L 15730932 intron CycE - chr2L 15731023 intron CycE - chr2L_19_15730001 chr2L_15730001 RAL-900_125b 605 chr2L 15749985 15750267 chr2L 15750148 15750401 18 152 0.0 0.0 0.0 18.0 416 chr2L 15749985 intron l(2)35Di - chr2L 15750193 intron l(2)35Di - chr2L 15750401 intron l(2)35Di - chr2L_18_15750001 chr2L_15750001 RAL-900_125b 606 chr2L 15826847 15826889 chr2L 15829291 15829333 Tabor 22 2444 0.5 13.0 6.8 2.8 2486 chr2L 15826847 intergenic not near genes chr2L 15828090 intergenic not near genes chr2L 15829333 intergenic not near genes chr2L_22_15825001 chr2L_15825001 RAL-900_125b 607 chr2L 15912363 15912437 chr2L 15912717 15912790 35 352 5.0 6.0 5.5 5.4 427 chr2L 15912363 intron beat-Ib - chr2L 15912576 intron,5` UTR beat-Ib -,CR44868 + chr2L 15912790 intron,5` UTR beat-Ib -,CR44868 + chr2L_35_15910001 chr2L_15910001 RAL-900_125b 608 chr2L 15950357 15950382 chr2L 15950485 15950510 11 128 10.5 4.5 7.5 1.3 153 chr2L 15950357 intron beat-Ib - chr2L 15950434 intron beat-Ib - chr2L 15950510 intron beat-Ib - chr2L_11_15950001 chr2L_15950001 RAL-900_125b 609 chr2L 15955983 15955990 chr2L 15957500 15957507 hobo 6 1517 20.5 14.0 17.2 0.3 1524 chr2L 15955983 intron beat-Ib - chr2L 15956745 intron beat-Ib - chr2L 15957507 intron beat-Ib - chr2L_6_15955001 chr2L_15955001 RAL-900_125b 610 chr2L 15955992 15956046 chr2L 15957499 15957544 hobo 20 1516 11.5 14.0 12.8 1.4 1552 chr2L 15955992 intron beat-Ib - chr2L 15956768 intron beat-Ib - chr2L 15957544 intron beat-Ib - chr2L_20_15955001 chr2L_15955001 RAL-900_125b 611 chr2L 16008656 16008676 chr2L 16008806 16008827 7 151 4.0 6.0 5.0 1.2 171 chr2L 16008656 intron beat-Ic + chr2L 16008742 intron beat-Ic + chr2L 16008827 intron beat-Ic + chr2L_7_16005001 chr2L_16005001 RAL-900_125b 612 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 21 145889 27.5 33.5 30.5 0.7 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_21_16140001 chr2L_16140001 RAL-900_125b 613 chr2L 16098892 16098907 chr2L 16099030 16099045 7 138 12.5 7.0 9.8 0.6 153 chr2L 16098892 intergenic not near genes chr2L 16098968 intergenic not near genes chr2L 16099045 intergenic not near genes chr2L_7_16095001 chr2L_16095001 RAL-900_125b 614 chr2L 16098909 16098941 chr2L 16099021 16099079 13 134 10.5 6.0 8.2 1.4 170 chr2L 16098909 intergenic not near genes chr2L 16098994 intergenic not near genes chr2L 16099079 intergenic not near genes chr2L_13_16095001 chr2L_16095001 RAL-900_125b 615 chr2L 16106511 16106570 chr2L 16106679 16106738 27 167 14.0 10.0 12.0 2.1 227 chr2L 16106511 intergenic not near genes chr2L 16106624 intergenic not near genes chr2L 16106738 intergenic not near genes chr2L_27_16105001 chr2L_16105001 RAL-900_125b 616 chr2L 16123439 16123517 chr2L 16123571 16123645 26 131 6.5 9.5 8.0 2.9 206 chr2L 16123439 intergenic not near genes chr2L 16123542 intergenic not near genes chr2L 16123645 intergenic not near genes chr2L_26_16120001 chr2L_16120001 RAL-900_125b 617 chr2L 16141124 16141185 chr2L 16146381 16146442 copia 21 5257 9.5 8.0 8.8 2.1 5318 chr2L 16141124 intergenic not near genes chr2L 16143783 intergenic not near genes chr2L 16146442 intergenic not near genes chr2L_21_16140001 chr2L_16140001 RAL-900_125b 618 chr2L 16152079 16152098 chr2L 16152223 16152242 4 144 9.5 8.0 8.8 0.4 163 chr2L 16152079 intergenic not near genes chr2L 16152160 intergenic not near genes chr2L 16152242 intergenic not near genes chr2L_4_16150001 chr2L_16150001 RAL-900_125b 619 chr2L 16153694 16153755 chr2L 16160812 16160873 297 25 7117 4.5 4.0 4.2 4.8 7179 chr2L 16153694 intergenic not near genes chr2L 16157284 intergenic not near genes chr2L 16160873 intergenic not near genes chr2L_25_16155001 chr2L_16155001 RAL-900_125b 620 chr2L 16163566 16163590 chr2L 16163692 16163716 7 126 4.5 8.0 6.2 1.0 150 chr2L 16163566 intergenic not near genes chr2L 16163641 intergenic not near genes chr2L 16163716 intergenic not near genes chr2L_7_16160001 chr2L_16160001 RAL-900_125b 621 chr2L 9084339 9084340 chr2L 16217660 16217660 11 7133321 28.5 33.5 31.0 0.3 7133321 chr2L 9084339 intron Toll-4 + chr2L 12651000 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_11_12650001 chr2L_12650001 RAL-900_125b 622 chr2L 16071770 16071771 chr2L 16217660 16217660 copia 17 145889 27.5 33.5 30.5 0.5 145890 chr2L 16071770 intron beat-Ia + chr2L 16144715 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_17_16140001 chr2L_16140001 RAL-900_125b 623 chr2L 16217660 16217660 chr2L 18622718 18622719 4 2405058 36.0 41.5 38.8 0.1 2405059 chr2L 16217660 intergenic not near genes chr2L 17420190 intron Dif - chr2L 18622719 intron MESR3 + chr2L_4_17420001 chr2L_17420001 RAL-900_125b 624 chr2L 16223943 16224013 chr2L 16224117 16224187 5 174 0.0 0.0 0.0 5.0 244 chr2L 16223943 intergenic not near genes chr2L 16224065 intergenic not near genes chr2L 16224187 intergenic not near genes chr2L_5_16220001 chr2L_16220001 RAL-900_125b 625 chr2L 16226135 16226208 chr2L 16226272 16226345 33 136 3.5 6.5 5.0 5.5 210 chr2L 16226135 intergenic not near genes chr2L 16226240 intergenic not near genes chr2L 16226345 intergenic not near genes chr2L_33_16225001 chr2L_16225001 RAL-900_125b 626 chr2L 16242023 16242056 chr2L 16242165 16242198 19 140 11.0 0.0 5.5 2.9 175 chr2L 16242023 5` UTR CG42818 + chr2L 16242110 exon CG42818 + chr2L 16242198 exon CG42818 + chr2L_19_16240001 chr2L_16240001 RAL-900_125b 627 chr2L 16243647 16243845 chr2L 16243780 16243990 38 140 0.0 0.0 0.0 38.0 343 chr2L 16243647 exon CG42818 + chr2L 16243818 exon CG42818 + chr2L 16243990 exon CG42818 + chr2L_38_16240001 chr2L_16240001 RAL-900_125b 628 chr2L 16256726 16256729 chr2L 16256862 16256865 4 136 0.0 5.5 2.8 1.1 139 chr2L 16256726 intron PRL-1 - chr2L 16256796 intron PRL-1 - chr2L 16256865 intron PRL-1 - chr2L_4_16255001 chr2L_16255001 RAL-900_125b 629 chr2L 16280235 16280277 chr2L 16281453 16281465 1360 15 1215 11.5 14.0 12.8 1.1 1230 chr2L 16280235 intron crp - chr2L 16280850 intron crp - chr2L 16281465 intron crp - chr2L_15_16280001 chr2L_16280001 RAL-900_125b 630 chr2L 16339631 16339655 chr2L 16339758 16339761 5 116 7.5 1.5 4.5 0.9 130 chr2L 16339631 exon CG42266 - chr2L 16339696 exon CG42266 - chr2L 16339761 exon CG42266 - chr2L_5_16335001 chr2L_16335001 RAL-900_125b 631 chr2L 16354725 16354784 chr2L 16354866 16354926 19 141 4.5 5.5 5.0 3.2 201 chr2L 16354725 intergenic CaBP1 -,CG4455 + chr2L 16354826 intergenic CaBP1 -,CG4455 + chr2L 16354926 3` UTR CaBP1 - chr2L_19_16350001 chr2L_16350001 RAL-900_125b 632 chr2L 16363909 16363972 chr2L 16364205 16364268 16 295 0.5 12.0 6.2 2.2 359 chr2L 16363909 intergenic not near genes chr2L 16364088 intergenic not near genes chr2L 16364268 intergenic not near genes chr2L_16_16360001 chr2L_16360001 RAL-900_125b 633 chr2L 16386428 16386441 chr2L 16386556 16386569 4 128 0.0 14.5 7.2 0.5 141 chr2L 16386428 intergenic not near genes chr2L 16386498 intergenic not near genes chr2L 16386569 intergenic not near genes chr2L_4_16385001 chr2L_16385001 RAL-900_125b 634 chr2L 16458779 16458853 chr2L 16459025 16459100 7 246 0.5 3.0 1.8 2.5 321 chr2L 16458779 intergenic not near genes chr2L 16458940 intergenic not near genes chr2L 16459100 intergenic not near genes chr2L_7_16455001 chr2L_16455001 RAL-900_125b 635 chr2L 16468221 16468300 chr2L 16468385 16468442 15 160 0.0 6.0 3.0 3.8 221 chr2L 16468221 exon dac - chr2L 16468332 intron dac - chr2L 16468442 intron dac - chr2L_15_16465001 chr2L_16465001 RAL-900_125b 636 chr2L 16500087 16500103 chr2L 16500219 16500235 7 132 0.0 7.5 3.8 1.5 148 chr2L 16500087 intron Tpr2 + chr2L 16500161 intron Tpr2 + chr2L 16500235 intron Tpr2 + chr2L_7_16500001 chr2L_16500001 RAL-900_125b 637 chr2L 16504977 16505006 chr2L 16505137 16505166 18 160 0.0 17.5 8.8 1.8 189 chr2L 16504977 intron Tpr2 + chr2L 16505072 intron Tpr2 + chr2L 16505166 intron Tpr2 + chr2L_18_16505001 chr2L_16505001 RAL-900_125b 638 chr2L 16505008 16505017 chr2L 16505105 16505177 6 150 0.0 9.5 4.8 1.0 169 chr2L 16505008 intron Tpr2 + chr2L 16505092 intron Tpr2 + chr2L 16505177 intron Tpr2 + chr2L_6_16505001 chr2L_16505001 RAL-900_125b 639 chr2L 16511936 16511993 chr2L 16519113 16519170 HMS-Beagle 28 7176 7.5 7.0 7.2 3.4 7234 chr2L 16511936 intron CG5953 - chr2L 16515553 intron CG5953 - chr2L 16519170 intron CG5953 - chr2L_28_16515001 chr2L_16515001 RAL-900_125b 640 chr2L 16548439 16548462 chr2L 16548611 16548634 8 172 9.0 0.0 4.5 1.5 195 chr2L 16548439 intron CG42389 + chr2L 16548536 intron CG42389 + chr2L 16548634 intron CG42389 + chr2L_8_16545001 chr2L_16545001 RAL-900_125b 641 chr2L 16589782 16589825 chr2L 16589921 16589965 17 139 11.5 12.5 12.0 1.3 183 chr2L 16589782 intron CG42389 + chr2L 16589874 intron CG42389 + chr2L 16589965 intron CG42389 + chr2L_17_16585001 chr2L_16585001 RAL-900_125b 642 chr2L 16592047 16592121 chr2L 16592302 16592376 20 254 7.0 4.0 5.5 3.1 329 chr2L 16592047 intron CG42389 + chr2L 16592212 intron CG42389 + chr2L 16592376 intron CG42389 + chr2L_20_16590001 chr2L_16590001 RAL-900_125b 643 chr2L 16654658 16654723 chr2L 16654801 16654866 28 143 12.0 9.5 10.8 2.4 208 chr2L 16654658 intron CG42389 + chr2L 16654762 intron CG42389 + chr2L 16654866 intron CG42389 + chr2L_28_16650001 chr2L_16650001 RAL-900_125b 644 chr2L 16670380 16670449 chr2L 16670507 16670576 41 125 12.0 13.5 12.8 3.0 196 chr2L 16670380 intron Trpgamma - chr2L 16670478 intron Trpgamma - chr2L 16670576 intron Trpgamma - chr2L_41_16670001 chr2L_16670001 RAL-900_125b 645 chr2L 16697018 16697063 chr2L 16697261 16697306 11 243 13.0 3.0 8.0 1.2 288 chr2L 16697018 intron grp + chr2L 16697162 intron grp + chr2L 16697306 intron grp + chr2L_11_16695001 chr2L_16695001 RAL-900_125b 646 chr2L 16703616 16703654 chr2L 16703910 16703945 8 292 0.0 6.5 3.2 1.9 329 chr2L 16703616 intergenic not near genes chr2L 16703780 intergenic not near genes chr2L 16703945 intergenic CG31808 - chr2L_8_16700001 chr2L_16700001 RAL-900_125b 647 chr2L 16710676 16710752 chr2L 16710810 16710820 27 126 6.0 9.0 7.5 3.2 144 chr2L 16710676 intron CG31808 - chr2L 16710748 intron CG31808 - chr2L 16710820 intron CG31808 - chr2L_27_16710001 chr2L_16710001 RAL-900_125b 648 chr2L 16866975 16867043 chr2L 16867120 16867188 39 144 6.5 5.0 5.8 5.7 213 chr2L 16866975 intergenic not near genes chr2L 16867082 intergenic not near genes chr2L 16867188 intergenic not near genes chr2L_39_16865001 chr2L_16865001 RAL-900_125b 649 chr2L 16939994 16940012 chr2L 16940096 16940140 5 118 11.0 18.5 14.8 0.3 146 chr2L 16939994 intergenic not near genes chr2L 16940067 intergenic not near genes chr2L 16940140 intergenic not near genes chr2L_5_16940001 chr2L_16940001 RAL-900_125b 650 chr2L 16952639 16952711 chr2L 16952798 16952870 40 159 5.5 5.0 5.2 6.5 231 chr2L 16952639 intergenic not near genes chr2L 16952754 intergenic not near genes chr2L 16952870 intergenic not near genes chr2L_40_16950001 chr2L_16950001 RAL-900_125b 651 chr2L 16958062 16958120 chr2L 16962900 16962958 Doc 21 4838 11.0 7.5 9.2 2.1 4896 chr2L 16958062 intergenic not near genes chr2L 16960510 intergenic not near genes chr2L 16962958 intergenic not near genes chr2L_21_16960001 chr2L_16960001 RAL-900_125b 652 chr2L 17032455 17032521 chr2L 17032590 17032656 25 135 6.0 5.5 5.8 3.7 201 chr2L 17032455 intergenic not near genes chr2L 17032556 intergenic not near genes chr2L 17032656 intergenic not near genes chr2L_25_17030001 chr2L_17030001 RAL-900_125b 653 chr2L 17033866 17033944 chr2L 17034001 17034079 23 135 3.5 6.0 4.8 4.0 213 chr2L 17033866 intergenic not near genes chr2L 17033972 intergenic not near genes chr2L 17034079 intergenic not near genes chr2L_23_17030001 chr2L_17030001 RAL-900_125b 654 chr2L 17052364 17052435 chr2L 17052526 17052597 32 162 5.0 6.5 5.8 4.7 233 chr2L 17052364 intergenic not near genes chr2L 17052480 intergenic not near genes chr2L 17052597 intergenic not near genes chr2L_32_17050001 chr2L_17050001 RAL-900_125b 655 chr2L 17053234 17053300 chr2L 17053694 17053760 22 458 9.5 10.0 9.8 2.0 526 chr2L 17053234 intergenic not near genes chr2L 17053497 intergenic not near genes chr2L 17053760 intergenic not near genes chr2L_22_17050001 chr2L_17050001 RAL-900_125b 656 chr2L 17058396 17058412 chr2L 17058599 17058615 6 203 16.0 7.5 11.8 0.5 219 chr2L 17058396 intergenic not near genes chr2L 17058506 intergenic not near genes chr2L 17058615 intergenic not near genes chr2L_6_17055001 chr2L_17055001 RAL-900_125b 657 chr2L 17062710 17062764 chr2L 17062842 17062896 14 132 9.0 3.5 6.2 1.9 186 chr2L 17062710 intergenic not near genes chr2L 17062803 intergenic not near genes chr2L 17062896 intergenic not near genes chr2L_14_17060001 chr2L_17060001 RAL-900_125b 658 chr2L 17129800 17129820 chr2L 17129955 17129965 7 154 13.0 7.0 10.0 0.6 165 chr2L 17129800 intergenic not near genes chr2L 17129882 intergenic not near genes chr2L 17129965 intergenic not near genes chr2L_7_17125001 chr2L_17125001 RAL-900_125b 659 chr2L 17129822 17129833 chr2L 17129954 17129988 9 152 11.5 7.0 9.2 0.9 166 chr2L 17129822 intergenic not near genes chr2L 17129905 intergenic not near genes chr2L 17129988 intergenic not near genes chr2L_9_17125001 chr2L_17125001 RAL-900_125b 660 chr2L 17167522 17167550 chr2L 17167813 17167841 pogo 7 291 13.0 7.5 10.2 0.6 319 chr2L 17167522 intron,intron CG34106 +,beat-IIIa + chr2L 17167682 intron,intron CG34106 +,beat-IIIa + chr2L 17167841 intron,intron CG34106 +,beat-IIIa + chr2L_7_17165001 chr2L_17165001 RAL-900_125b 661 chr2L 17167551 17167589 chr2L 17167809 17167880 pogo 13 288 8.5 6.5 7.5 1.5 329 chr2L 17167551 intron,intron CG34106 +,beat-IIIa + chr2L 17167716 intron,intron CG34106 +,beat-IIIa + chr2L 17167880 intron,intron CG34106 +,beat-IIIa + chr2L_13_17165001 chr2L_17165001 RAL-900_125b 662 chr2L 17199120 17199172 chr2L 17200637 17200689 hobo 16 1517 14.5 14.0 14.2 1.1 1569 chr2L 17199120 intron beat-IIIc - chr2L 17199904 intron beat-IIIc - chr2L 17200689 intron beat-IIIc - chr2L_16_17195001 chr2L_17195001 RAL-900_125b 663 chr2L 17238817 17239067 chr2L 17239029 17239201 40 172 0.0 0.0 0.0 40.0 384 chr2L 17238817 intron beat-IIIc - chr2L 17239009 intron beat-IIIc - chr2L 17239201 intron beat-IIIc - chr2L_40_17235001 chr2L_17235001 RAL-900_125b 664 chr2L 17273150 17273170 chr2L 17277983 17278003 F-element 9 4833 13.5 7.0 10.2 0.8 4853 chr2L 17273150 intergenic not near genes chr2L 17275576 intergenic not near genes chr2L 17278003 intergenic not near genes chr2L_9_17275001 chr2L_17275001 RAL-900_125b 665 chr2L 17273172 17273215 chr2L 17277980 17278047 F-element 17 4829 9.0 6.5 7.8 1.9 4875 chr2L 17273172 intergenic not near genes chr2L 17275610 intergenic not near genes chr2L 17278047 intergenic not near genes chr2L_17_17275001 chr2L_17275001 RAL-900_125b 666 chr2L 17303394 17303411 chr2L 17303622 17303628 4 223 19.0 7.0 13.0 0.3 234 chr2L 17303394 intergenic not near genes chr2L 17303511 intergenic not near genes chr2L 17303628 intergenic not near genes chr2L_4_17300001 chr2L_17300001 RAL-900_125b 667 chr2L 17303417 17303463 chr2L 17303620 17303689 31 218 5.0 7.0 6.0 4.4 272 chr2L 17303417 intergenic not near genes chr2L 17303553 intergenic not near genes chr2L 17303689 intergenic not near genes chr2L_31_17300001 chr2L_17300001 RAL-900_125b 668 chr2L 17327888 17327925 chr2L 17328024 17328061 16 136 13.5 15.0 14.2 1.1 173 chr2L 17327888 intergenic not near genes chr2L 17327974 intergenic not near genes chr2L 17328061 intergenic not near genes chr2L_16_17325001 chr2L_17325001 RAL-900_125b 669 chr2L 17335479 17335534 chr2L 17336710 17336765 1360 13 1231 5.5 9.5 7.5 1.5 1286 chr2L 17335479 intergenic not near genes chr2L 17336122 intergenic not near genes chr2L 17336765 intergenic not near genes chr2L_13_17335001 chr2L_17335001 RAL-900_125b 670 chr2L 17379665 17379705 chr2L 17379799 17379840 20 135 8.0 9.5 8.8 2.0 175 chr2L 17379665 intron Lrch - chr2L 17379752 intron Lrch - chr2L 17379840 intron Lrch - chr2L_20_17375001 chr2L_17375001 RAL-900_125b 671 chr2L 17385972 17386023 chr2L 17386103 17386154 15 131 11.0 9.0 10.0 1.4 182 chr2L 17385972 intron CLIP-190 + chr2L 17386063 intron CLIP-190 + chr2L 17386154 intron CLIP-190 + chr2L_15_17385001 chr2L_17385001 RAL-900_125b 672 chr2L 17397960 17398020 chr2L 17398090 17398160 8 139 0.0 11.0 5.5 1.2 200 chr2L 17397960 intron CLIP-190 + chr2L 17398060 intron CLIP-190 + chr2L 17398160 intron CLIP-190 + chr2L_8_17395001 chr2L_17395001 RAL-900_125b 673 chr2L 17399307 17399588 chr2L 17399459 17399725 27 151 9.5 5.5 7.5 3.2 418 chr2L 17399307 intron CLIP-190 + chr2L 17399516 intron CLIP-190 + chr2L 17399725 intron CLIP-190 + chr2L_27_17395001 chr2L_17395001 RAL-900_125b 674 chr2L 17420843 17420912 chr2L 17420974 17421043 26 131 6.0 8.5 7.2 3.2 200 chr2L 17420843 intron Dif - chr2L 17420943 intron Dif - chr2L 17421043 intron Dif - chr2L_26_17420001 chr2L_17420001 RAL-900_125b 675 chr2L 17432595 17432660 chr2L 17432722 17432787 35 125 7.0 9.0 8.0 3.9 192 chr2L 17432595 intron Dif - chr2L 17432691 intron Dif - chr2L 17432787 intron Dif - chr2L_35_17430001 chr2L_17430001 RAL-900_125b 676 chr2L 17456330 17456429 chr2L 17456487 17456560 18 137 0.0 0.0 0.0 18.0 230 chr2L 17456330 intron CG5050 + chr2L 17456445 intron CG5050 + chr2L 17456560 intron CG5050 + chr2L_18_17455001 chr2L_17455001 RAL-900_125b 677 chr2L 17543548 17543611 chr2L 17543691 17543753 24 142 9.5 12.5 11.0 2.0 205 chr2L 17543548 intergenic not near genes chr2L 17543650 intergenic not near genes chr2L 17543753 intergenic not near genes chr2L_24_17540001 chr2L_17540001 RAL-900_125b 678 chr2L 17550109 17550168 chr2L 17550242 17550315 17 145 5.5 7.0 6.2 2.4 206 chr2L 17550109 intergenic not near genes chr2L 17550212 intergenic not near genes chr2L 17550315 intergenic not near genes chr2L_17_17550001 chr2L_17550001 RAL-900_125b 679 chr2L 17551272 17551299 chr2L 17551433 17551460 9 161 15.5 0.0 7.8 1.0 188 chr2L 17551272 intergenic not near genes chr2L 17551366 intergenic not near genes chr2L 17551460 intergenic not near genes chr2L_9_17550001 chr2L_17550001 RAL-900_125b 680 chr2L 17562904 17562959 chr2L 17563033 17563088 23 125 7.0 10.0 8.5 2.4 184 chr2L 17562904 intergenic not near genes chr2L 17562996 intergenic not near genes chr2L 17563088 intergenic not near genes chr2L_23_17560001 chr2L_17560001 RAL-900_125b 681 chr2L 17564113 17564177 chr2L 17564246 17564310 25 133 5.5 9.5 7.5 2.9 197 chr2L 17564113 intergenic not near genes chr2L 17564212 intergenic not near genes chr2L 17564310 intergenic not near genes chr2L_25_17560001 chr2L_17560001 RAL-900_125b 682 chr2L 17580852 17580919 chr2L 17581756 17581823 23 902 9.5 11.5 10.5 2.0 971 chr2L 17580852 intergenic not near genes chr2L 17581338 intergenic not near genes chr2L 17581823 intergenic not near genes chr2L_23_17580001 chr2L_17580001 RAL-900_125b 683 chr2L 17607441 17607445 chr2L 17607589 17607593 8 148 17.0 0.0 8.5 0.8 152 chr2L 17607441 intergenic CR44412 - chr2L 17607517 intergenic CR44412 - chr2L 17607593 intergenic CR44412 - chr2L_8_17605001 chr2L_17605001 RAL-900_125b 684 chr2L 17662709 17662774 chr2L 17662826 17662901 19 123 5.5 6.0 5.8 2.8 192 chr2L 17662709 intron CadN - chr2L 17662805 intron CadN - chr2L 17662901 intron CadN - chr2L_19_17660001 chr2L_17660001 RAL-900_125b 685 chr2L 17680940 17681023 chr2L 17681067 17681150 12 127 4.5 3.5 4.0 2.4 210 chr2L 17680940 intron CadN - chr2L 17681045 intron CadN - chr2L 17681150 intron CadN - chr2L_12_17680001 chr2L_17680001 RAL-900_125b 686 chr2L 17687474 17687520 chr2L 17692269 17692315 F-element 22 4795 6.0 8.5 7.2 2.7 4841 chr2L 17687474 intron CadN - chr2L 17689894 intron CadN - chr2L 17692315 intron CadN - chr2L_22_17685001 chr2L_17685001 RAL-900_125b 687 chr2L 17723743 17723799 chr2L 17723886 17723942 20 143 5.0 4.5 4.8 3.4 199 chr2L 17723743 intron CadN - chr2L 17723842 intron CadN - chr2L 17723942 intron CadN - chr2L_20_17720001 chr2L_17720001 RAL-900_125b 688 chr2L 17727819 17727871 chr2L 17729336 17729388 hobo 28 1515 9.5 5.5 7.5 3.3 1569 chr2L 17727819 intron CadN - chr2L 17728604 intron CadN - chr2L 17729388 intron CadN - chr2L_28_17725001 chr2L_17725001 RAL-900_125b 689 chr2L 17741101 17741172 chr2L 17741235 17741306 24 133 12.5 6.5 9.5 2.3 205 chr2L 17741101 intron CadN - chr2L 17741204 intron CadN - chr2L 17741306 intron CadN - chr2L_24_17740001 chr2L_17740001 RAL-900_125b 690 chr2L 17819875 17819943 chr2L 17825129 17825197 copia 13 5254 8.5 4.0 6.2 1.8 5322 chr2L 17819875 intron CadN2 - chr2L 17822536 intron CadN2 - chr2L 17825197 intron CadN2 - chr2L_13_17820001 chr2L_17820001 RAL-900_125b 691 chr2L 17863571 17863643 chr2L 17863702 17863774 28 131 6.0 7.5 6.8 3.6 203 chr2L 17863571 intron CadN2 - chr2L 17863672 intron CadN2 - chr2L 17863774 intron CadN2 - chr2L_28_17860001 chr2L_17860001 RAL-900_125b 692 chr2L 17879972 17880030 chr2L 17880109 17880167 14 136 6.0 11.0 8.5 1.5 195 chr2L 17879972 intergenic not near genes chr2L 17880070 intergenic not near genes chr2L 17880167 intergenic not near genes chr2L_14_17880001 chr2L_17880001 RAL-900_125b 693 chr2L 17911915 17911983 chr2L 17914143 17914210 pogo 19 2227 6.5 7.0 6.8 2.4 2295 chr2L 17911915 intergenic not near genes chr2L 17913062 intergenic not near genes chr2L 17914210 intergenic CG43271 - chr2L_19_17910001 chr2L_17910001 RAL-900_125b 694 chr2L 17925972 17926007 chr2L 17926208 17926243 11 236 3.0 5.0 4.0 2.2 271 chr2L 17925972 intergenic not near genes chr2L 17926108 intergenic not near genes chr2L 17926243 intergenic not near genes chr2L_11_17925001 chr2L_17925001 RAL-900_125b 695 chr2L 17944078 17944138 chr2L 17944206 17944261 22 126 12.5 7.5 10.0 2.0 183 chr2L 17944078 intergenic not near genes chr2L 17944170 intergenic not near genes chr2L 17944261 intergenic not near genes chr2L_22_17940001 chr2L_17940001 RAL-900_125b 696 chr2L 17951902 17951971 chr2L 17953419 17953488 hobo 36 1517 7.0 7.0 7.0 4.5 1586 chr2L 17951902 intergenic CR44398 -,CR44397 - chr2L 17952695 intergenic not near genes chr2L 17953488 intergenic not near genes chr2L_36_17950001 chr2L_17950001 RAL-900_125b 697 chr2L 18002067 18002127 chr2L 18002270 18002317 17 207 8.5 3.5 6.0 2.4 250 chr2L 18002067 intergenic not near genes chr2L 18002192 intergenic not near genes chr2L 18002317 intergenic not near genes chr2L_17_18000001 chr2L_18000001 RAL-900_125b 698 chr2L 18051835 18051898 chr2L 18061027 18061095 roo 25 9194 12.5 6.0 9.2 2.5 9260 chr2L 18051835 intron rdo + chr2L 18056465 intron rdo + chr2L 18061095 intron rdo + chr2L_25_18055001 chr2L_18055001 RAL-900_125b 699 chr2L 18078238 18078304 chr2L 18078372 18078440 27 134 10.0 9.0 9.5 2.6 202 chr2L 18078238 intergenic Arr1 + chr2L 18078339 5` UTR Arr1 + chr2L 18078440 exon Arr1 + chr2L_27_18075001 chr2L_18075001 RAL-900_125b 700 chr2L 18079768 18079839 chr2L 18079904 18079975 42 135 8.0 5.0 6.5 5.6 207 chr2L 18079768 intron Arr1 + chr2L 18079872 intron Arr1 + chr2L 18079975 exon Arr1 + chr2L_42_18075001 chr2L_18075001 RAL-900_125b 701 chr2L 18107734 18107811 chr2L 18107868 18107945 20 129 7.5 7.0 7.2 2.4 211 chr2L 18107734 intergenic not near genes chr2L 18107840 intergenic not near genes chr2L 18107945 intergenic not near genes chr2L_20_18105001 chr2L_18105001 RAL-900_125b 702 chr2L 18184983 18185024 chr2L 18185148 18185189 19 165 7.0 9.5 8.2 2.1 206 chr2L 18184983 intron,5` UTR CG42750 -,CG7180 - chr2L 18185086 intron CG42750 - chr2L 18185189 intron,3` UTR CG42750 -,CR44900 - chr2L_19_18185001 chr2L_18185001 RAL-900_125b 703 chr2L 18235026 18235033 chr2L 18235208 18235208 4 180 12.5 6.5 9.5 0.4 182 chr2L 18235026 intron CG42750 - chr2L 18235117 intron CG42750 - chr2L 18235208 intron CG42750 - chr2L_4_18235001 chr2L_18235001 RAL-900_125b 704 chr2L 18235034 18235082 chr2L 18235203 18235239 14 178 6.0 6.0 6.0 2.0 205 chr2L 18235034 intron CG42750 - chr2L 18235136 intron CG42750 - chr2L 18235239 intron CG42750 - chr2L_14_18235001 chr2L_18235001 RAL-900_125b 705 chr2L 18250517 18250535 chr2L 18250679 18250697 7 162 10.0 6.0 8.0 0.8 180 chr2L 18250517 intron CG42750 - chr2L 18250607 intron CG42750 - chr2L 18250697 intron CG42750 - chr2L_7_18250001 chr2L_18250001 RAL-900_125b 706 chr2L 18254768 18254830 chr2L 18254918 18254980 27 149 9.5 6.0 7.8 3.1 212 chr2L 18254768 intron CG42750 - chr2L 18254874 intron CG42750 - chr2L 18254980 intron CG42750 - chr2L_27_18250001 chr2L_18250001 RAL-900_125b 707 chr2L 18264097 18264134 chr2L 18264235 18264272 15 138 12.5 0.0 6.2 2.1 175 chr2L 18264097 intron CG42750 - chr2L 18264184 intron CG42750 - chr2L 18264272 intron CG42750 - chr2L_15_18260001 chr2L_18260001 RAL-900_125b 708 chr2L 18291482 18291513 chr2L 18291630 18291661 17 148 17.5 0.0 8.8 1.7 179 chr2L 18291482 intergenic CG43362 -,CR44693 +,CR44696 - chr2L 18291572 intergenic CR44693 +,CG43362 -,CR44696 - chr2L 18291661 intergenic CR44693 +,CG43362 -,CR44696 - chr2L_17_18290001 chr2L_18290001 RAL-900_125b 709 chr2L 18299336 18299362 chr2L 18299593 18299619 6 257 15.0 7.0 11.0 0.5 283 chr2L 18299336 intergenic not near genes chr2L 18299478 intergenic not near genes chr2L 18299619 intergenic not near genes chr2L_6_18295001 chr2L_18295001 RAL-900_125b 710 chr2L 18337584 18337654 chr2L 18337710 18337780 25 125 11.0 12.0 11.5 2.0 196 chr2L 18337584 intron Fas3 + chr2L 18337682 intron Fas3 + chr2L 18337780 intron Fas3 + chr2L_25_18335001 chr2L_18335001 RAL-900_125b 711 chr2L 18394719 18394788 chr2L 18394958 18395027 28 238 7.5 6.5 7.0 3.5 308 chr2L 18394719 intergenic not near genes chr2L 18394873 intergenic not near genes chr2L 18395027 intergenic not near genes chr2L_28_18390001 chr2L_18390001 RAL-900_125b 712 chr2L 18407984 18408051 chr2L 18412818 18412893 Doc 22 4837 11.5 0.0 5.8 3.2 4909 chr2L 18407984 intergenic not near genes chr2L 18410438 intergenic not near genes chr2L 18412893 intergenic not near genes chr2L_22_18410001 chr2L_18410001 RAL-900_125b 713 chr2L 18417994 18417998 chr2L 18418099 18418126 4 122 1.5 13.0 7.2 0.5 132 chr2L 18417994 intergenic not near genes chr2L 18418060 intergenic not near genes chr2L 18418126 intergenic not near genes chr2L_4_18415001 chr2L_18415001 RAL-900_125b 714 chr2L 18423804 18423873 chr2L 18423945 18424014 30 141 6.0 8.0 7.0 3.8 210 chr2L 18423804 intergenic not near genes chr2L 18423909 intergenic not near genes chr2L 18424014 intergenic not near genes chr2L_30_18420001 chr2L_18420001 RAL-900_125b 715 chr2L 18575579 18575590 chr2L 18575726 18575737 10 147 6.5 0.0 3.2 2.4 158 chr2L 18575579 intron Pde11 - chr2L 18575658 intron Pde11 - chr2L 18575737 intron Pde11 - chr2L_10_18575001 chr2L_18575001 RAL-900_125b 716 chr2L 18633642 18633646 chr2L 18638470 18638474 Doc 5 4828 0.0 20.0 10.0 0.5 4832 chr2L 18633642 intron MESR3 + chr2L 18636058 intron MESR3 + chr2L 18638474 intron MESR3 + chr2L_5_18635001 chr2L_18635001 RAL-900_125b 717 chr2L 18790292 18790366 chr2L 18791070 18791136 23 772 63.0 59.5 61.2 0.4 844 chr2L 18790292 intron ham - chr2L 18790714 intron ham - chr2L 18791136 intron ham - chr2L_23_18790001 chr2L_18790001 RAL-900_125b 718 chr2L 18811368 18811430 chr2L 18811500 18811562 22 132 9.5 3.0 6.2 3.1 194 chr2L 18811368 intergenic CG10570 -,CG42502 - chr2L 18811465 intergenic CG10570 -,CG42502 - chr2L 18811562 intergenic not near genes chr2L_22_18810001 chr2L_18810001 RAL-900_125b 719 chr2L 18812457 18812546 chr2L 18812835 18812908 27 367 0.5 8.0 4.2 5.2 451 chr2L 18812457 intergenic CG17325 +,CG42305 + chr2L 18812682 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812908 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_27_18810001 chr2L_18810001 RAL-900_125b 720 chr2L 18872904 18872979 chr2L 18873040 18873095 30 132 11.5 10.5 11.0 2.5 191 chr2L 18872904 intron tup - chr2L 18873000 intron tup - chr2L 18873095 intron tup - chr2L_30_18870001 chr2L_18870001 RAL-900_125b 721 chr2L 18883820 18883824 chr2L 18883947 18883956 5 131 22.5 9.0 15.8 0.3 136 chr2L 18883820 intergenic not near genes chr2L 18883888 intergenic not near genes chr2L 18883956 intergenic not near genes chr2L_5_18880001 chr2L_18880001 RAL-900_125b 722 chr2L 18883827 18883854 chr2L 18883942 18883986 12 130 17.5 8.5 13.0 0.9 159 chr2L 18883827 intergenic not near genes chr2L 18883906 intergenic not near genes chr2L 18883986 intergenic not near genes chr2L_12_18880001 chr2L_18880001 RAL-900_125b 723 chr2L 18883856 18883876 chr2L 18883938 18884008 9 126 14.5 8.0 11.2 0.7 152 chr2L 18883856 intergenic not near genes chr2L 18883932 intergenic not near genes chr2L 18884008 intergenic not near genes chr2L_9_18880001 chr2L_18880001 RAL-900_125b 724 chr2L 18898368 18898401 chr2L 18898489 18898533 12 128 8.0 0.0 4.0 2.4 165 chr2L 18898368 intergenic not near genes chr2L 18898450 intergenic not near genes chr2L 18898533 intergenic not near genes chr2L_12_18895001 chr2L_18895001 RAL-900_125b 725 chr2L 18902574 18902649 chr2L 18902905 18902980 36 330 4.0 4.0 4.0 7.2 406 chr2L 18902574 intergenic not near genes chr2L 18902777 intergenic not near genes chr2L 18902980 intergenic not near genes chr2L_36_18900001 chr2L_18900001 RAL-900_125b 726 chr2L 18926529 18926573 chr2L 18926685 18926730 11 156 6.5 0.5 3.5 2.4 201 chr2L 18926529 intron ssp3 - chr2L 18926630 intron ssp3 - chr2L 18926730 intron ssp3 - chr2L_11_18925001 chr2L_18925001 RAL-900_125b 727 chr2L 19070235 19070244 chr2L 19070376 19070387 4 142 13.0 10.0 11.5 0.3 152 chr2L 19070235 intergenic CG10702 - chr2L 19070311 intergenic CG10702 - chr2L 19070387 intergenic not near genes chr2L_4_19070001 chr2L_19070001 RAL-900_125b 728 chr2L 19070256 19070299 chr2L 19070364 19070442 23 128 6.0 5.0 5.5 3.5 186 chr2L 19070256 intergenic CG10702 - chr2L 19070349 intergenic CG10702 - chr2L 19070442 intergenic not near genes chr2L_23_19070001 chr2L_19070001 RAL-900_125b 729 chr2L 19141157 19141216 chr2L 19141306 19141375 25 153 8.5 11.0 9.8 2.3 218 chr2L 19141157 intron brat + chr2L 19141266 intron brat + chr2L 19141375 intron brat + chr2L_25_19140001 chr2L_19140001 RAL-900_125b 730 chr2L 19147329 19147391 chr2L 19154409 19154476 297 17 7082 4.5 7.5 6.0 2.4 7147 chr2L 19147329 intron brat + chr2L 19150902 intron brat + chr2L 19154476 intron brat + chr2L_17_19150001 chr2L_19150001 RAL-900_125b 731 chr2L 19178811 19178823 chr2L 19178938 19178950 5 127 17.0 19.0 18.0 0.3 139 chr2L 19178811 3` UTR brat + chr2L 19178880 3` UTR brat + chr2L 19178950 3` UTR brat + chr2L_5_19175001 chr2L_19175001 RAL-900_125b 732 chr2L 19199643 19199703 chr2L 19199755 19199765 29 119 11.0 12.5 11.8 2.3 122 chr2L 19199643 intron drl + chr2L 19199704 intron drl + chr2L 19199765 intron drl + chr2L_29_19195001 chr2L_19195001 RAL-900_125b 733 chr2L 19237261 19237264 chr2L 19237411 19237414 5 150 24.0 7.5 15.8 0.3 153 chr2L 19237261 intergenic not near genes chr2L 19237338 intergenic not near genes chr2L 19237414 intergenic not near genes chr2L_5_19235001 chr2L_19235001 RAL-900_125b 734 chr2L 19237265 19237267 chr2L 19237409 19237411 4 147 23.5 6.5 15.0 0.2 146 chr2L 19237265 intergenic not near genes chr2L 19237338 intergenic not near genes chr2L 19237411 intergenic not near genes chr2L_4_19235001 chr2L_19235001 RAL-900_125b 735 chr2L 19237269 19237333 chr2L 19237403 19237443 25 141 9.5 4.5 7.0 3.1 174 chr2L 19237269 intergenic not near genes chr2L 19237356 intergenic not near genes chr2L 19237443 intergenic not near genes chr2L_25_19235001 chr2L_19235001 RAL-900_125b 736 chr2L 6874062 6874085 chr2L 19268043 19268044 4 12393960 20.0 34.0 27.0 0.1 12393982 chr2L 6874062 5` UTR CR44914 + chr2L 13071053 intergenic not near genes chr2L 19268044 intergenic not near genes chr2L_4_13070001 chr2L_13070001 RAL-900_125b 737 chr2L 19344971 19345037 chr2L 19357230 19357296 blood 23 12258 8.0 11.5 9.8 2.1 12325 chr2L 19344971 intron dnt - chr2L 19351134 intron dnt - chr2L 19357296 intron dnt - chr2L_23_19350001 chr2L_19350001 RAL-900_125b 738 chr2L 19357496 19357569 chr2L 19357636 19357678 26 138 7.5 11.5 9.5 2.5 182 chr2L 19357496 intron dnt - chr2L 19357587 intron dnt - chr2L 19357678 intron dnt - chr2L_26_19355001 chr2L_19355001 RAL-900_125b 739 chr2L 19365495 19365565 chr2L 19365621 19365691 10 126 0.0 9.0 4.5 1.8 196 chr2L 19365495 intergenic CG13086 + chr2L 19365593 intergenic CG13086 + chr2L 19365691 intergenic CG13086 + chr2L_10_19365001 chr2L_19365001 RAL-900_125b 740 chr2L 19374445 19374520 chr2L 19374604 19374679 37 158 5.5 9.0 7.2 4.5 234 chr2L 19374445 intergenic not near genes chr2L 19374562 intergenic not near genes chr2L 19374679 intergenic not near genes chr2L_37_19370001 chr2L_19370001 RAL-900_125b 741 chr2L 19405574 19405636 chr2L 19405714 19405776 20 140 8.0 8.5 8.2 2.2 202 chr2L 19405574 intron Pax - chr2L 19405675 intron Pax - chr2L 19405776 intron Pax - chr2L_20_19405001 chr2L_19405001 RAL-900_125b 742 chr2L 19441018 19441074 chr2L 19441145 19441201 13 127 4.5 7.5 6.0 1.9 183 chr2L 19441018 intron CG10237 - chr2L 19441110 intron CG10237 - chr2L 19441201 5` UTR CG10237 - chr2L_13_19440001 chr2L_19440001 RAL-900_125b 743 chr2L 19487174 19487236 chr2L 19487300 19487367 23 136 10.5 8.0 9.2 2.3 193 chr2L 19487174 intergenic CG13083 + chr2L 19487270 intergenic CG13083 + chr2L 19487367 intergenic CG13083 + chr2L_23_19485001 chr2L_19485001 RAL-900_125b 744 chr2L 19520134 19520190 chr2L 19520263 19520319 34 129 11.0 11.5 11.2 2.8 185 chr2L 19520134 intron CG10132 + chr2L 19520226 intron CG10132 + chr2L 19520319 intron CG10132 + chr2L_34_19520001 chr2L_19520001 RAL-900_125b 745 chr2L 19543087 19543142 chr2L 19543211 19543276 24 134 8.5 3.5 6.0 3.4 189 chr2L 19543087 intron ref(2)P + chr2L 19543182 intron ref(2)P + chr2L 19543276 intron ref(2)P + chr2L_24_19540001 chr2L_19540001 RAL-900_125b 746 chr2L 19559956 19560038 chr2L 19560259 19560336 28 302 6.0 8.5 7.2 3.4 380 chr2L 19559956 exon Tep5 + chr2L 19560146 exon Tep5 + chr2L 19560336 intron Tep5 + chr2L_28_19560001 chr2L_19560001 RAL-900_125b 747 chr2L 19560797 19560865 chr2L 19560924 19561010 23 136 12.0 0.0 6.0 3.3 213 chr2L 19560797 exon Tep5 + chr2L 19560904 exon Tep5 + chr2L 19561010 exon Tep5 + chr2L_23_19560001 chr2L_19560001 RAL-900_125b 748 chr2L 19561296 19561364 chr2L 19561489 19561555 30 191 7.5 12.0 9.8 2.8 259 chr2L 19561296 exon Tep5 + chr2L 19561426 exon Tep5 + chr2L 19561555 exon Tep5 + chr2L_30_19560001 chr2L_19560001 RAL-900_125b 749 chr2L 19562478 19562558 chr2L 19562609 19562681 23 128 0.0 5.0 2.5 6.6 203 chr2L 19562478 exon Tep5 + chr2L 19562580 intron Tep5 + chr2L 19562681 exon Tep5 + chr2L_23_19560001 chr2L_19560001 RAL-900_125b 750 chr2L 19620052 19620070 chr2L 19621091 19621092 jockey 4 1035 18.5 11.5 15.0 0.2 1040 chr2L 19620052 intron Lar + chr2L 19620572 intron Lar + chr2L 19621092 intron Lar + chr2L_4_19620001 chr2L_19620001 RAL-900_125b 751 chr2L 19620072 19620128 chr2L 19621078 19621103 jockey 16 1022 8.5 6.5 7.5 1.9 1031 chr2L 19620072 intron Lar + chr2L 19620588 intron Lar + chr2L 19621103 intron Lar + chr2L_16_19620001 chr2L_19620001 RAL-900_125b 752 chr2L 19638490 19638562 chr2L 19638628 19638700 35 137 7.5 10.5 9.0 3.5 210 chr2L 19638490 intron Lar + chr2L 19638595 intron Lar + chr2L 19638700 intron Lar + chr2L_35_19635001 chr2L_19635001 RAL-900_125b 753 chr2L 19652526 19652597 chr2L 19674012 19674080 opus 29 21484 9.5 8.0 8.8 3.0 21554 chr2L 19652526 intron Lar + chr2L 19663303 intron Lar + chr2L 19674080 intron Lar + chr2L_29_19660001 chr2L_19660001 RAL-900_125b 754 chr2L 19690275 19690355 chr2L 19690403 19690463 15 120 8.5 7.5 8.0 1.7 188 chr2L 19690275 intron Lar + chr2L 19690369 intron Lar + chr2L 19690463 intron Lar + chr2L_15_19690001 chr2L_19690001 RAL-900_125b 755 chr2L 19703500 19703510 chr2L 19712686 19712696 roo 6 9186 19.0 7.0 13.0 0.4 9196 chr2L 19703500 intron Lar + chr2L 19708098 intron Lar + chr2L 19712696 intron Lar + chr2L_6_19705001 chr2L_19705001 RAL-900_125b 756 chr2L 19703511 19703555 chr2L 19712682 19712741 roo 21 9184 10.0 5.5 7.8 2.4 9230 chr2L 19703511 intron Lar + chr2L 19708126 intron Lar + chr2L 19712741 intron Lar + chr2L_21_19705001 chr2L_19705001 RAL-900_125b 757 chr2L 19718489 19718515 chr2L 19718620 19718645 10 131 19.5 16.0 17.8 0.5 156 chr2L 19718489 intron Lar + chr2L 19718567 intron Lar + chr2L 19718645 intron Lar + chr2L_10_19715001 chr2L_19715001 RAL-900_125b 758 chr2L 19737329 19737389 chr2L 19740820 19740857 1360 31 3488 11.5 7.5 9.5 3.0 3528 chr2L 19737329 intergenic Nf-YB + chr2L 19739093 intergenic not near genes chr2L 19740857 intergenic not near genes chr2L_31_19735001 chr2L_19735001 RAL-900_125b 759 chr2L 19762758 19762830 chr2L 19763050 19763122 pogo 20 290 4.5 11.0 7.8 2.3 364 chr2L 19762758 exon fbp - chr2L 19762940 intron fbp - chr2L 19763122 intron fbp - chr2L_20_19760001 chr2L_19760001 RAL-900_125b 760 chr2L 19773119 19773190 chr2L 19773256 19773327 28 137 9.0 6.0 7.5 3.3 208 chr2L 19773119 intergenic not near genes chr2L 19773223 intergenic not near genes chr2L 19773327 intergenic not near genes chr2L_28_19770001 chr2L_19770001 RAL-900_125b 761 chr2L 19776618 19776655 chr2L 19776748 19776785 11 130 19.5 11.5 15.5 0.7 167 chr2L 19776618 3` UTR CdGAPr - chr2L 19776702 3` UTR CdGAPr - chr2L 19776785 3` UTR CdGAPr - chr2L_11_19775001 chr2L_19775001 RAL-900_125b 762 chr2L 19824369 19824426 chr2L 19824502 19824559 39 133 8.0 11.0 9.5 3.7 190 chr2L 19824369 intron sick + chr2L 19824464 intron sick + chr2L 19824559 intron sick + chr2L_39_19820001 chr2L_19820001 RAL-900_125b 763 chr2L 19833099 19833125 chr2L 19833227 19833253 5 128 13.0 0.0 6.5 0.7 154 chr2L 19833099 intron sick + chr2L 19833176 intron sick + chr2L 19833253 intron sick + chr2L_5_19830001 chr2L_19830001 RAL-900_125b 764 chr2L 19837233 19837310 chr2L 19837363 19837439 26 130 10.5 7.5 9.0 2.6 206 chr2L 19837233 intron sick + chr2L 19837336 intron sick + chr2L 19837439 intron sick + chr2L_26_19835001 chr2L_19835001 RAL-900_125b 765 chr2L 19846239 19846273 chr2L 19846370 19846404 12 129 1.5 17.5 9.5 1.1 165 chr2L 19846239 intron sick + chr2L 19846322 intron sick + chr2L 19846404 intron sick + chr2L_12_19845001 chr2L_19845001 RAL-900_125b 766 chr2L 19850936 19850955 chr2L 19851302 19851321 6 365 19.5 8.5 14.0 0.4 385 chr2L 19850936 intron sick + chr2L 19851128 intron sick + chr2L 19851321 intron sick + chr2L_6_19850001 chr2L_19850001 RAL-900_125b 767 chr2L 19850962 19850981 chr2L 19851301 19851347 15 356 12.5 8.5 10.5 1.3 385 chr2L 19850962 intron sick + chr2L 19851154 intron sick + chr2L 19851347 intron sick + chr2L_15_19850001 chr2L_19850001 RAL-900_125b 768 chr2L 19850982 19851011 chr2L 19851298 19851377 14 362 7.5 7.5 7.5 1.6 395 chr2L 19850982 intron sick + chr2L 19851180 intron sick + chr2L 19851377 intron sick + chr2L_14_19850001 chr2L_19850001 RAL-900_125b 769 chr2L 19878948 19879002 chr2L 19879207 19879260 22 259 9.5 0.0 4.8 3.8 312 chr2L 19878948 intron sick + chr2L 19879104 intron sick + chr2L 19879260 intron sick + chr2L_22_19875001 chr2L_19875001 RAL-900_125b 770 chr2L 19911247 19911322 chr2L 19911385 19911459 21 138 4.5 7.5 6.0 3.0 212 chr2L 19911247 intron,3` UTR sick +,CR43097 - chr2L 19911353 intron,3` UTR sick +,CR43097 - chr2L 19911459 intron,3` UTR sick +,CR43097 - chr2L_21_19910001 chr2L_19910001 RAL-900_125b 771 chr2L 19913016 19913064 chr2L 19913512 19913560 16 496 17.0 0.0 8.5 1.7 544 chr2L 19913016 intron,3` UTR sick +,Victoria - chr2L 19913288 intron,exon sick +,Victoria - chr2L 19913560 intron sick + chr2L_16_19910001 chr2L_19910001 RAL-900_125b 772 chr2L 19950160 19950200 chr2L 19950292 19950319 23 131 6.5 5.0 5.8 3.4 159 chr2L 19950160 intron sick + chr2L 19950240 intron sick + chr2L 19950319 intron sick + chr2L_23_19950001 chr2L_19950001 RAL-900_125b 773 chr2L 19986896 19986967 chr2L 19987076 19987150 41 181 73.0 67.5 70.2 0.6 254 chr2L 19986896 intron CG43861 - chr2L 19987023 intron CG43861 - chr2L 19987150 intron CG43861 - chr2L_41_19985001 chr2L_19985001 RAL-900_125b 774 chr2L 20005834 20005897 chr2L 20010955 20011022 flea 30 5124 9.5 11.0 10.2 2.7 5188 chr2L 20005834 intron CG43861 - chr2L 20008428 intron CG43861 - chr2L 20011022 intron CG43861 - chr2L_30_20005001 chr2L_20005001 RAL-900_125b 775 chr2L 20079474 20079517 chr2L 20079645 20079688 27 170 14.5 5.5 10.0 2.5 214 chr2L 20079474 intron,intron neb +,fok - chr2L 20079581 intron,intron neb +,fok - chr2L 20079688 intron,intron neb +,fok - chr2L_27_20075001 chr2L_20075001 RAL-900_125b 776 chr2L 20115531 20115594 chr2L 20115671 20115732 16 138 2.5 8.0 5.2 2.6 201 chr2L 20115531 intergenic not near genes chr2L 20115632 intergenic not near genes chr2L 20115732 intergenic not near genes chr2L_16_20115001 chr2L_20115001 RAL-900_125b 777 chr2L 20225590 20225617 chr2L 20225716 20225745 15 127 6.0 12.5 9.2 1.5 155 chr2L 20225590 intergenic not near genes chr2L 20225668 intergenic not near genes chr2L 20225745 intergenic not near genes chr2L_15_20225001 chr2L_20225001 RAL-900_125b 778 chr2L 20269565 20269619 chr2L 20269839 20269892 24 270 11.0 9.5 10.2 2.1 327 chr2L 20269565 intergenic not near genes chr2L 20269728 intergenic not near genes chr2L 20269892 intergenic not near genes chr2L_24_20265001 chr2L_20265001 RAL-900_125b 779 chr2L 20269621 20269631 chr2L 20269835 20269899 7 260 7.5 9.0 8.2 0.8 278 chr2L 20269621 intergenic not near genes chr2L 20269760 intergenic not near genes chr2L 20269899 intergenic not near genes chr2L_7_20265001 chr2L_20265001 RAL-900_125b 780 chr2L 20271220 20271266 chr2L 20271347 20271399 18 129 11.0 9.5 10.2 1.6 179 chr2L 20271220 intergenic not near genes chr2L 20271310 intergenic not near genes chr2L 20271399 intergenic not near genes chr2L_18_20270001 chr2L_20270001 RAL-900_125b 781 chr2L 20272077 20272129 chr2L 20282838 20282890 copia 26 10761 8.0 11.0 9.5 2.5 10813 chr2L 20272077 intergenic not near genes chr2L 20277484 intergenic not near genes chr2L 20282890 intergenic not near genes chr2L_26_20275001 chr2L_20275001 RAL-900_125b 782 chr2L 20296460 20296521 chr2L 20296591 20296652 14 131 2.5 5.0 3.8 2.9 192 chr2L 20296460 intergenic CR43414 - chr2L 20296556 intergenic CR43414 - chr2L 20296652 3` UTR CR43414 - chr2L_14_20295001 chr2L_20295001 RAL-900_125b 783 chr2L 20298777 20298853 chr2L 20298910 20298986 30 130 7.0 7.0 7.0 3.8 209 chr2L 20298777 intergenic not near genes chr2L 20298882 intergenic not near genes chr2L 20298986 intergenic not near genes chr2L_30_20295001 chr2L_20295001 RAL-900_125b 784 chr2L 20299960 20299984 chr2L 20300093 20300112 9 130 17.0 11.5 14.2 0.6 152 chr2L 20299960 intergenic not near genes chr2L 20300036 intergenic not near genes chr2L 20300112 intergenic not near genes chr2L_9_20300001 chr2L_20300001 RAL-900_125b 785 chr2L 20299985 20300017 chr2L 20300092 20300155 13 114 10.5 11.5 11.0 1.1 170 chr2L 20299985 intergenic not near genes chr2L 20300070 intergenic not near genes chr2L 20300155 intergenic not near genes chr2L_13_20300001 chr2L_20300001 RAL-900_125b 786 chr2L 20302946 20302977 chr2L 20303086 20303117 15 140 14.5 0.0 7.2 1.8 171 chr2L 20302946 intergenic not near genes chr2L 20303032 intergenic not near genes chr2L 20303117 intergenic not near genes chr2L_15_20300001 chr2L_20300001 RAL-900_125b 787 chr2L 20303159 20303179 chr2L 20310677 20310695 blood 11 7517 1.5 21.0 11.2 0.9 7536 chr2L 20303159 intergenic not near genes chr2L 20306927 intergenic not near genes chr2L 20310695 intergenic not near genes chr2L_11_20305001 chr2L_20305001 RAL-900_125b 788 chr2L 20310833 20310893 chr2L 20310963 20311023 19 130 6.0 10.5 8.2 2.1 190 chr2L 20310833 intergenic spir + chr2L 20310928 intergenic spir + chr2L 20311023 intergenic spir + chr2L_19_20310001 chr2L_20310001 RAL-900_125b 789 chr2L 20312529 20312567 chr2L 20312664 20312702 17 135 11.0 15.0 13.0 1.2 173 chr2L 20312529 intron spir + chr2L 20312616 intron spir + chr2L 20312702 intron spir + chr2L_17_20310001 chr2L_20310001 RAL-900_125b 790 chr2L 20321501 20321533 chr2L 20321610 20321655 6 115 6.5 9.0 7.8 0.7 154 chr2L 20321501 intron spir + chr2L 20321578 intron spir + chr2L 20321655 intron spir + chr2L_6_20320001 chr2L_20320001 RAL-900_125b 791 chr2L 20372188 20372245 chr2L 20372479 20372536 pogo 27 290 7.0 13.5 10.2 2.4 348 chr2L 20372188 intergenic Ugt37a1 - chr2L 20372362 intergenic Ugt37a1 - chr2L 20372536 exon Ugt37a1 - chr2L_27_20370001 chr2L_20370001 RAL-900_125b 792 chr2L 20383422 20383467 chr2L 20383564 20383609 19 139 9.5 16.0 12.8 1.4 187 chr2L 20383422 intergenic not near genes chr2L 20383516 intergenic not near genes chr2L 20383609 intergenic not near genes chr2L_19_20380001 chr2L_20380001 RAL-900_125b 793 chr2L 20404527 20404547 chr2L 20404655 20404675 8 128 12.0 14.0 13.0 0.6 148 chr2L 20404527 intron CG10947 - chr2L 20404601 intron CG10947 - chr2L 20404675 intron CG10947 - chr2L_8_20400001 chr2L_20400001 RAL-900_125b 794 chr2L 20492707 20492773 chr2L 20493107 20493173 31 399 9.0 7.0 8.0 3.4 466 chr2L 20492707 intergenic not near genes chr2L 20492940 intergenic not near genes chr2L 20493173 intergenic not near genes chr2L_31_20490001 chr2L_20490001 RAL-900_125b 795 chr2L 20498641 20498698 chr2L 20498790 20498847 22 149 11.5 10.5 11.0 1.8 206 chr2L 20498641 intergenic not near genes chr2L 20498744 intergenic not near genes chr2L 20498847 intergenic not near genes chr2L_22_20495001 chr2L_20495001 RAL-900_125b 796 chr2L 20524137 20524164 chr2L 20524269 20524296 5 132 21.5 1.0 11.2 0.4 159 chr2L 20524137 intergenic not near genes chr2L 20524216 intergenic not near genes chr2L 20524296 intergenic not near genes chr2L_5_20520001 chr2L_20520001 RAL-900_125b 797 chr2L 20525813 20525819 chr2L 20525932 20525946 4 123 12.5 9.0 10.8 0.3 133 chr2L 20525813 intergenic not near genes chr2L 20525880 intergenic not near genes chr2L 20525946 intergenic not near genes chr2L_4_20525001 chr2L_20525001 RAL-900_125b 798 chr2L 20525824 20525829 chr2L 20525923 20525951 4 116 10.5 8.0 9.2 0.4 127 chr2L 20525824 intergenic not near genes chr2L 20525888 intergenic not near genes chr2L 20525951 intergenic not near genes chr2L_4_20525001 chr2L_20525001 RAL-900_125b 799 chr2L 20549088 20549154 chr2L 20549220 20549286 28 131 2.0 10.5 6.2 3.9 198 chr2L 20549088 intergenic not near genes chr2L 20549187 intergenic not near genes chr2L 20549286 intergenic not near genes chr2L_28_20545001 chr2L_20545001 RAL-900_125b 800 chr2L 20550584 20550666 chr2L 20550716 20550796 18 131 2.5 7.5 5.0 3.0 212 chr2L 20550584 intergenic not near genes chr2L 20550690 intergenic not near genes chr2L 20550796 intergenic not near genes chr2L_18_20550001 chr2L_20550001 RAL-900_125b 801 chr2L 20553142 20553192 chr2L 20553268 20553318 32 126 11.5 11.0 11.2 2.6 176 chr2L 20553142 intergenic not near genes chr2L 20553230 intergenic not near genes chr2L 20553318 intergenic not near genes chr2L_32_20550001 chr2L_20550001 RAL-900_125b 802 chr2L 20563505 20563561 chr2L 20563632 20563688 21 127 10.0 11.0 10.5 1.8 183 chr2L 20563505 intron CR45347 + chr2L 20563596 intron CR45347 + chr2L 20563688 intron CR45347 + chr2L_21_20560001 chr2L_20560001 RAL-900_125b 803 chr2L 20568612 20568683 chr2L 20569052 20569123 X-element 34 439 7.5 5.5 6.5 4.5 511 chr2L 20568612 intron CR45347 + chr2L 20568868 intron CR45347 + chr2L 20569123 intron CR45347 + chr2L_34_20565001 chr2L_20565001 RAL-900_125b 804 chr2L 20576180 20576236 chr2L 20583689 20583755 blood 20 7518 6.0 9.0 7.5 2.4 7575 chr2L 20576180 intergenic CR45347 + chr2L 20579968 intergenic not near genes chr2L 20583755 3` UTR CR44909 - chr2L_20_20575001 chr2L_20575001 RAL-900_125b 805 chr2L 20601741 20601814 chr2L 20601869 20601942 37 128 6.5 6.0 6.2 5.1 201 chr2L 20601741 intron CR44909 - chr2L 20601842 intron CR44909 - chr2L 20601942 intron CR44909 - chr2L_37_20600001 chr2L_20600001 RAL-900_125b 806 chr2L 20602670 20602747 chr2L 20602808 20602885 26 138 0.5 5.5 3.0 6.5 215 chr2L 20602670 intron CR44909 - chr2L 20602778 intron CR44909 - chr2L 20602885 intron CR44909 - chr2L_26_20600001 chr2L_20600001 RAL-900_125b 807 chr2L 20607598 20607611 chr2L 20607726 20607740 4 128 17.0 13.5 15.2 0.2 142 chr2L 20607598 intron,3` UTR CR44909 -,CR43608 - chr2L 20607669 intron,3` UTR CR44909 -,CR43608 - chr2L 20607740 intron,3` UTR CR44909 -,CR43608 - chr2L_4_20605001 chr2L_20605001 RAL-900_125b 808 chr2L 20607615 20607629 chr2L 20607722 20607753 5 117 13.5 12.0 12.8 0.4 138 chr2L 20607615 intron,3` UTR CR44909 -,CR43608 - chr2L 20607684 intron,3` UTR CR44909 -,CR43608 - chr2L 20607753 intron,3` UTR CR44909 -,CR43608 - chr2L_5_20605001 chr2L_20605001 RAL-900_125b 809 chr2L 20607631 20607669 chr2L 20607716 20607763 10 107 9.0 13.0 11.0 0.8 132 chr2L 20607631 intron,3` UTR CR44909 -,CR43608 - chr2L 20607697 intron,3` UTR CR44909 -,CR43608 - chr2L 20607763 intron,3` UTR CR44909 -,CR43608 - chr2L_10_20605001 chr2L_20605001 RAL-900_125b 810 chr2L 20668655 20668707 chr2L 20668774 20668833 6 125 11.5 11.5 11.5 0.5 178 chr2L 20668655 intron CG31678 - chr2L 20668744 intron CG31678 - chr2L 20668833 intron CG31678 - chr2L_6_20665001 chr2L_20665001 RAL-900_125b 811 chr2L 20674783 20674864 chr2L 20674918 20674992 16 128 6.5 6.0 6.2 2.2 209 chr2L 20674783 intron CG31678 - chr2L 20674888 intron CG31678 - chr2L 20674992 intron CG31678 - chr2L_16_20670001 chr2L_20670001 RAL-900_125b 812 chr2L 20792975 20793109 chr2L 20793106 20793285 25 190 0.0 0.0 0.0 25.0 310 chr2L 20792975 intron vari - chr2L 20793130 intron vari - chr2L 20793285 intron vari - chr2L_25_20790001 chr2L_20790001 RAL-900_125b 813 chr2L 20835765 20835834 chr2L 20836532 20836601 Quasimodo 30 767 10.5 9.0 9.8 2.8 836 chr2L 20835765 5` UTR Oseg5 - chr2L 20836183 intergenic Oseg5 -,Spn38F - chr2L 20836601 intergenic Spn38F - chr2L_30_20835001 chr2L_20835001 RAL-900_125b 814 chr2L 20891487 20891544 chr2L 20896638 20896695 jockey 24 5150 3.0 5.5 4.2 4.6 5208 chr2L 20891487 intron,intron CG43739 -,sky - chr2L 20894091 intron,intron CG43739 -,sky - chr2L 20896695 intron,intron CG43739 -,sky - chr2L_24_20890001 chr2L_20890001 RAL-900_125b 815 chr2L 20901479 20901487 chr2L 20902695 20902703 1360 7 1216 0.0 7.5 3.8 1.5 1224 chr2L 20901479 intron,intron CG43739 -,sky - chr2L 20902091 intron,intron CG43739 -,sky - chr2L 20902703 intron,intron CG43739 -,sky - chr2L_7_20900001 chr2L_20900001 RAL-900_125b 816 chr2L 20967880 20967905 chr2L 20968023 20968048 14 143 24.0 10.0 17.0 0.8 168 chr2L 20967880 intron CG42238 - chr2L 20967964 intron CG42238 - chr2L 20968048 intron CG42238 - chr2L_14_20965001 chr2L_20965001 RAL-900_125b 817 chr2L 20967909 20967954 chr2L 20968022 20968097 22 141 13.5 10.0 11.8 1.7 188 chr2L 20967909 intron CG42238 - chr2L 20968003 intron CG42238 - chr2L 20968097 intron CG42238 - chr2L_22_20965001 chr2L_20965001 RAL-900_125b 818 chr2L 20976604 20976665 chr2L 20981469 20981530 X-element 30 4865 12.0 11.0 11.5 2.4 4926 chr2L 20976604 intron CG42238 - chr2L 20979067 intron CG42238 - chr2L 20981530 intron CG42238 - chr2L_30_20975001 chr2L_20975001 RAL-900_125b 819 chr2L 20984560 20984629 chr2L 20984691 20984760 25 131 8.0 10.0 9.0 2.5 200 chr2L 20984560 intron CG42238 - chr2L 20984660 intron CG42238 - chr2L 20984760 intron CG42238 - chr2L_25_20980001 chr2L_20980001 RAL-900_125b 820 chr2L 21020235 21020295 chr2L 21023962 21024022 NOF 33 3723 9.5 10.0 9.8 3.1 3787 chr2L 21020235 intron CG42238 - chr2L 21022128 intron CG42238 - chr2L 21024022 intron CG42238 - chr2L_33_21020001 chr2L_21020001 RAL-900_125b 821 chr2L 21041092 21041163 chr2L 21049403 21049459 Tirant 32 8308 9.0 15.0 12.0 2.5 8367 chr2L 21041092 intron CG42238 - chr2L 21045276 intron CG42238 - chr2L 21049459 intron CG42238 - chr2L_32_21045001 chr2L_21045001 RAL-900_125b 822 chr2L 21113644 21113667 chr2L 21113787 21113810 10 142 17.0 11.0 14.0 0.7 166 chr2L 21113644 intron Nhe2 + chr2L 21113727 intron Nhe2 + chr2L 21113810 intron Nhe2 + chr2L_10_21110001 chr2L_21110001 RAL-900_125b 823 chr2L 21113676 21113712 chr2L 21113783 21113855 20 141 8.5 9.5 9.0 2.0 179 chr2L 21113676 intron Nhe2 + chr2L 21113766 intron Nhe2 + chr2L 21113855 intron Nhe2 + chr2L_20_21110001 chr2L_21110001 RAL-900_125b 824 chr2L 21169797 21169868 chr2L 21169929 21170000 39 131 11.5 6.5 9.0 3.9 203 chr2L 21169797 intron Acon + chr2L 21169898 intron Acon + chr2L 21170000 intron Acon + chr2L_39_21165001 chr2L_21165001 RAL-900_125b 825 chr2L 21286562 21286630 chr2L 21286690 21286759 29 128 14.0 13.5 13.8 2.0 197 chr2L 21286562 exon Mio - chr2L 21286660 intron Mio - chr2L 21286759 intron Mio - chr2L_29_21285001 chr2L_21285001 RAL-900_125b 826 chr2L 21307422 21307495 chr2L 21307554 21307627 21 130 7.0 11.0 9.0 2.1 205 chr2L 21307422 intron Mio - chr2L 21307524 intron Mio - chr2L 21307627 intron Mio - chr2L_21_21305001 chr2L_21305001 RAL-900_125b 827 chr2L 21347509 21347573 chr2L 21355026 21355049 blood 19 7516 12.0 6.0 9.0 1.9 7540 chr2L 21347509 intron Tsp39D + chr2L 21351279 intron Tsp39D + chr2L 21355049 intron Tsp39D + chr2L_19_21350001 chr2L_21350001 RAL-900_125b 828 chr2L 21596987 21597057 chr2L 21604781 21604851 roo 7 7794 12.5 12.0 12.2 0.5 7864 chr2L 21596987 intergenic not near genes chr2L 21600919 intergenic not near genes chr2L 21604851 intergenic not near genes chr2L_7_21600001 chr2L_21600001 RAL-900_125b 829 chr2L 21691792 21691809 chr2L 21698312 21698329 Burdock 8 6520 16.0 1.0 8.5 0.8 6537 chr2L 21691792 intron CG31619 + chr2L 21695060 intron CG31619 + chr2L 21698329 intron CG31619 + chr2L_8_21695001 chr2L_21695001 RAL-900_125b 830 chr2L 21754620 21754680 chr2L 21754751 21754811 29 130 7.5 9.0 8.2 3.2 191 chr2L 21754620 intron step - chr2L 21754716 intron step - chr2L 21754811 intron step - chr2L_29_21750001 chr2L_21750001 RAL-900_125b 831 chr2L 21755452 21755518 chr2L 21755621 21755692 32 173 9.5 9.5 9.5 3.0 240 chr2L 21755452 intron step - chr2L 21755572 intron step - chr2L 21755692 intron step - chr2L_32_21755001 chr2L_21755001 RAL-900_125b 832 chr2L 21757524 21757592 chr2L 21757655 21757723 34 131 6.5 6.0 6.2 4.7 199 chr2L 21757524 intergenic step -,CG1416 + chr2L 21757624 intergenic step -,CG1416 + chr2L 21757723 intergenic step -,CG1416 + chr2L_34_21755001 chr2L_21755001 RAL-900_125b 833 chr2L 21828102 21828173 chr2L 21828234 21828305 20 125 8.0 9.0 8.5 2.1 203 chr2L 21828102 intergenic tsh + chr2L 21828204 intergenic tsh + chr2L 21828305 intergenic tsh + chr2L_20_21825001 chr2L_21825001 RAL-900_125b 834 chr2L 21836366 21836422 chr2L 21836496 21836559 19 137 11.5 13.0 12.2 1.4 193 chr2L 21836366 3` UTR tsh + chr2L 21836462 3` UTR tsh + chr2L 21836559 3` UTR tsh + chr2L_19_21835001 chr2L_21835001 RAL-900_125b 835 chr2L 21855431 21855501 chr2L 21855567 21855638 25 136 10.0 9.5 9.8 2.3 207 chr2L 21855431 5` UTR CR44917 + chr2L 21855534 intron CR44917 + chr2L 21855638 intron CR44917 + chr2L_25_21855001 chr2L_21855001 RAL-900_125b 836 chr2L 21859275 21859289 chr2L 21859405 21859412 8 129 21.5 8.0 14.8 0.5 137 chr2L 21859275 intron CR44917 + chr2L 21859344 intron CR44917 + chr2L 21859412 intron CR44917 + chr2L_8_21855001 chr2L_21855001 RAL-900_125b 837 chr2L 21859292 21859340 chr2L 21859399 21859470 22 125 10.0 9.5 9.8 2.0 178 chr2L 21859292 intron CR44917 + chr2L 21859381 intron CR44917 + chr2L 21859470 intron CR44917 + chr2L_22_21855001 chr2L_21855001 RAL-900_125b 838 chr2L 21860282 21860299 chr2L 21860485 21860490 4 200 12.5 2.5 7.5 0.5 208 chr2L 21860282 intron CR44917 + chr2L 21860386 intron CR44917 + chr2L 21860490 intron CR44917 + chr2L_4_21860001 chr2L_21860001 RAL-900_125b 839 chr2L 21929033 21929057 chr2L 21929187 21929213 9 154 16.0 19.0 17.5 0.5 180 chr2L 21929033 intergenic not near genes chr2L 21929123 intergenic not near genes chr2L 21929213 intergenic not near genes chr2L_9_21925001 chr2L_21925001 RAL-900_125b 840 chr2L 21981638 21981707 chr2L 21990853 21990922 roo 22 9212 6.5 8.0 7.2 2.7 9284 chr2L 21981638 exon CG2528 - chr2L 21986280 intron CG2528 - chr2L 21990922 exon CG2528 - chr2L_22_21985001 chr2L_21985001 RAL-900_125b 841 chr2L 22047222 22047256 chr2L 22047386 22047431 12 173 8.0 17.5 12.8 0.9 209 chr2L 22047222 intergenic not near genes chr2L 22047326 intergenic not near genes chr2L 22047431 intergenic not near genes chr2L_12_22045001 chr2L_22045001 RAL-900_125b 842 chr2L 22073018 22073023 chr2L 22073153 22073158 INE-1 5 135 17.0 4.5 10.8 0.4 140 chr2L 22073018 intergenic CG31702 + chr2L 22073088 intergenic CG31702 + chr2L 22073158 intergenic CG31702 + chr2L_5_22070001 chr2L_22070001 RAL-900_125b 843 chr2L 22082203 22082211 chr2L 22082344 22082352 INE-1 5 141 12.0 16.5 14.2 0.3 149 chr2L 22082203 intergenic not near genes chr2L 22082278 intergenic not near genes chr2L 22082352 intergenic not near genes chr2L_5_22080001 chr2L_22080001 RAL-900_125b 844 chr2L 22164924 22164982 chr2L 22165103 22165158 21 179 13.5 9.5 11.5 1.7 234 chr2L 22164924 3` UTR CG42748 + chr2L 22165041 3` UTR CG42748 + chr2L 22165158 3` UTR CG42748 + chr2L_21_22165001 chr2L_22165001 RAL-900_125b 845 chr2L 22165472 22165530 chr2L 22165607 22165664 19 134 15.0 13.0 14.0 1.3 192 chr2L 22165472 3` UTR CG42748 + chr2L 22165568 3` UTR CG42748 + chr2L 22165664 3` UTR CG42748 + chr2L_19_22165001 chr2L_22165001 RAL-900_125b 846 chr2L 22197845 22197909 chr2L 22198094 22198158 21 249 8.5 12.0 10.2 1.9 313 chr2L 22197845 intron Ir40a - chr2L 22198002 intron Ir40a - chr2L 22198158 intron Ir40a - chr2L_21_22195001 chr2L_22195001 RAL-900_125b 847 chr2L 22228107 22228120 chr2L 22228220 22228251 8 128 24.0 12.0 18.0 0.4 144 chr2L 22228107 intergenic not near genes chr2L 22228179 intergenic not near genes chr2L 22228251 intergenic not near genes chr2L_8_22225001 chr2L_22225001 RAL-900_125b 848 chr2L 22245883 22245888 chr2L 22329197 22329202 gypsy4 5 83314 30.5 27.0 28.8 0.2 83319 chr2L 22245883 3` UTR CG3262 + chr2L 22287542 intergenic not near genes chr2L 22329202 intron CG17018 + chr2L_5_22285001 chr2L_22285001 RAL-900_125b 849 chr2L 22296866 22296918 chr2L 22297043 22297095 10 177 11.0 10.5 10.8 0.8 229 chr2L 22296866 intergenic not near genes chr2L 22296980 intergenic not near genes chr2L 22297095 intergenic not near genes chr2L_10_22295001 chr2L_22295001 RAL-900_125b 850 chr2L 22515102 22515130 chr2L 22522602 22522630 HMS-Beagle2 11 7500 11.0 0.0 5.5 1.7 7528 chr2L 22515102 intergenic not near genes chr2L 22518866 intergenic not near genes chr2L 22522630 intergenic not near genes chr2L_11_22515001 chr2L_22515001 RAL-900_125b 851 chr2L 22548898 22548927 chr2L 22550146 22550202 1360 4 1262 1.0 13.5 7.2 0.5 1304 chr2L 22548898 intergenic CG17490 + chr2L 22549550 intergenic not near genes chr2L 22550202 intergenic CG17493 + chr2L_4_22545001 chr2L_22545001 RAL-900_125b 852 chr2L 22558351 22558410 chr2L 22558702 22558771 24 359 9.5 13.5 11.5 1.9 420 chr2L 22558351 intergenic not near genes chr2L 22558561 intergenic not near genes chr2L 22558771 intergenic not near genes chr2L_24_22555001 chr2L_22555001 RAL-900_125b 853 chr2L 22581934 22582002 chr2L 22583773 22583842 S-element 26 1838 11.0 14.0 12.5 1.9 1908 chr2L 22581934 intron CG17494 + chr2L 22582888 intron CG17494 + chr2L 22583842 intron CG17494 + chr2L_26_22580001 chr2L_22580001 RAL-900_125b 854 chr2L 22719391 22719403 chr2L 22727564 22727576 gypsy2 4 8173 18.0 8.5 13.2 0.3 8185 chr2L 22719391 intron CG40006 - chr2L 22723484 intron CG40006 - chr2L 22727576 intron CG40006 - chr2L_4_22720001 chr2L_22720001 RAL-900_125b 855 chr2L 22719406 22719465 chr2L 22727559 22727642 gypsy2 20 8171 8.0 8.0 8.0 2.2 8236 chr2L 22719406 intron CG40006 - chr2L 22723524 intron CG40006 - chr2L 22727642 intron CG40006 - chr2L_20_22720001 chr2L_22720001 RAL-900_125b 856 chr2L 22776381 22776447 chr2L 22778220 22778286 S-element 22 1838 9.0 11.0 10.0 2.0 1905 chr2L 22776381 intergenic not near genes chr2L 22777334 intergenic not near genes chr2L 22778286 intergenic not near genes chr2L_22_22775001 chr2L_22775001 RAL-900_125b 857 chr2L 22941204 22941230 chr2L 22941336 22941362 11 132 16.5 8.0 12.2 0.8 158 chr2L 22941204 3` UTR lt + chr2L 22941283 3` UTR lt + chr2L 22941362 3` UTR lt + chr2L_11_22940001 chr2L_22940001 RAL-900_125b 858 chr2L 22941234 22941269 chr2L 22941330 22941401 12 129 5.5 8.5 7.0 1.5 167 chr2L 22941234 3` UTR lt + chr2L 22941318 3` UTR lt + chr2L 22941401 3` UTR lt + chr2L_12_22940001 chr2L_22940001 RAL-900_125b 859 chr2L 23006461 23006529 chr2L 23007186 23007255 Osvaldo 29 724 5.0 5.5 5.2 4.7 794 chr2L 23006461 intron Cht3 - chr2L 23006858 intron Cht3 - chr2L 23007255 intron Cht3 - chr2L_29_23005001 chr2L_23005001 RAL-900_125b 860 chr2L 23020477 23020532 chr2L 23020603 23020658 6 126 9.0 13.0 11.0 0.5 181 chr2L 23020477 intron Cht3 - chr2L 23020568 intron Cht3 - chr2L 23020658 intron Cht3 - chr2L_6_23020001 chr2L_23020001 RAL-900_125b 861 chr2L 23168860 23168869 chr2L 23168937 23168995 4 105 14.0 7.5 10.8 0.3 135 chr2L 23168860 intron,5` UTR CG12567 -,mir-2490 + chr2L 23168928 intron CG12567 - chr2L 23168995 intron CG12567 - chr2L_4_23165001 chr2L_23165001 RAL-900_125b 862 chr2R 469921 469962 chr2R 473212 473242 F-element 9 3287 6.5 13.0 9.8 0.8 3321 chr2R 469921 intergenic not near genes chr2R 471582 intergenic not near genes chr2R 473242 intergenic not near genes chr2R_9_470001 chr2R_470001 RAL-900_125b 863 chr2R 529315 529347 chr2R 537965 538016 Max-element 14 8670 6.0 7.0 6.5 1.9 8701 chr2R 529315 intron CG40378 + chr2R 533666 intron CG40378 + chr2R 538016 intron CG40378 + chr2R_14_530001 chr2R_530001 RAL-900_125b 864 chr2R 1082366 1082369 chr2R 1087192 1087195 Doc 4 4826 14.0 20.0 17.0 0.2 4829 chr2R 1082366 intron rl + chr2R 1084780 intron rl + chr2R 1087195 intron rl + chr2R_4_1080001 chr2R_1080001 RAL-900_125b 865 chr2R 1282397 1282401 chr2R 3998867 3998871 297 4 2716470 30.5 31.5 31.0 0.1 2716474 chr2R 1282397 intergenic not near genes chr2R 2640634 intergenic not near genes chr2R 3998871 intergenic not near genes chr2R_4_2640001 chr2R_2640001 RAL-900_125b 866 chr2R 1516566 1516603 chr2R 1521342 1521381 1731 40 4777 71.5 55.0 63.2 0.6 4815 chr2R 1516566 exon Maf1 - chr2R 1518974 intron Maf1 - chr2R 1521381 5` UTR Maf1 - chr2R_40_1515001 chr2R_1515001 RAL-900_125b 867 chr2R 1522953 1522956 chr2R 10413168 10413171 INE-1 5 8890215 165.5 16.0 90.8 0.1 8890218 chr2R 1522953 intron Maf1 - chr2R 5968062 intergenic CR44127 - chr2R 10413171 intron CG42732 - chr2R_5_5965001 chr2R_5965001 RAL-900_125b 868 chr2R 1919586 1919632 chr2R 1920012 1920058 12 426 46.0 43.0 44.5 0.3 472 chr2R 1919586 intron CG17684 - chr2R 1919822 intron CG17684 - chr2R 1920058 intron CG17684 - chr2R_12_1915001 chr2R_1915001 RAL-900_125b 869 chr2R 2498943 2499005 chr2R 2508140 2508202 roo 30 9197 8.0 10.5 9.2 2.9 9259 chr2R 2498943 intron MFS17 - chr2R 2503572 intron MFS17 - chr2R 2508202 intron MFS17 - chr2R_30_2500001 chr2R_2500001 RAL-900_125b 870 chr2R 1373052 1373069 chr2R 2589300 2589317 Cr1a 4 1216249 30.0 44.5 37.2 0.1 1216265 chr2R 1373052 intron l(2)41Ab + chr2R 1981184 intron CG17684 - chr2R 2589317 intergenic not near genes chr2R_4_1980001 chr2R_1980001 RAL-900_125b 871 chr2R 2591494 2591507 chr2R 2594220 2594233 roo 5 2726 28.5 38.5 33.5 0.1 2739 chr2R 2591494 intergenic not near genes chr2R 2592864 intergenic not near genes chr2R 2594233 intergenic not near genes chr2R_5_2590001 chr2R_2590001 RAL-900_125b 872 chr2R 2846550 2846610 chr2R 2846690 2846750 28 140 13.0 13.0 13.0 2.0 200 chr2R 2846550 intron CG41378 - chr2R 2846650 intron CG41378 - chr2R 2846750 intergenic CG41378 - chr2R_28_2845001 chr2R_2845001 RAL-900_125b 873 chr2R 3144041 3144110 chr2R 3393369 3393438 Doc 18 249327 34.0 40.5 37.2 0.5 249397 chr2R 3144041 intron CG42596 + chr2R 3268740 intergenic not near genes chr2R 3393438 intergenic not near genes chr2R_18_3265001 chr2R_3265001 RAL-900_125b 874 chr2R 3291952 3292103 chr2R 3915171 3915314 4 623215 22.0 37.0 29.5 0.1 623362 chr2R 3291952 intergenic not near genes chr2R 3603633 intergenic not near genes chr2R 3915314 intron uex - chr2R_4_3600001 chr2R_3600001 RAL-900_125b 875 chr2R 3532574 3532628 chr2R 3536067 3536121 Doc 23 3493 7.0 9.0 8.0 2.6 3547 chr2R 3532574 intergenic not near genes chr2R 3534348 intergenic not near genes chr2R 3536121 intergenic not near genes chr2R_23_3530001 chr2R_3530001 RAL-900_125b 876 chr2R 4604511 4604579 chr2R 4604640 4604672 21 123 11.5 12.5 12.0 1.6 161 chr2R 4604511 intron p120ctn + chr2R 4604592 intron p120ctn + chr2R 4604672 intron p120ctn + chr2R_21_4600001 chr2R_4600001 RAL-900_125b 877 chr2R 4617878 4617942 chr2R 4618198 4618264 13 320 7.5 10.5 9.0 1.3 386 chr2R 4617878 intergenic not near genes chr2R 4618071 intergenic not near genes chr2R 4618264 intergenic not near genes chr2R_13_4615001 chr2R_4615001 RAL-900_125b 878 chr2R 4622915 4622975 chr2R 4624118 4624183 1360 27 1207 8.5 6.5 7.5 3.2 1268 chr2R 4622915 intergenic CR44101 - chr2R 4623549 intergenic not near genes chr2R 4624183 intergenic not near genes chr2R_27_4620001 chr2R_4620001 RAL-900_125b 879 chr2R 4624605 4624618 chr2R 4626560 4626573 Bica 7 1955 21.0 11.5 16.2 0.4 1968 chr2R 4624605 intergenic not near genes chr2R 4625589 intergenic not near genes chr2R 4626573 intergenic not near genes chr2R_7_4625001 chr2R_4625001 RAL-900_125b 880 chr2R 4624623 4624664 chr2R 4626557 4626619 Bica 15 1954 9.0 11.5 10.2 1.3 1996 chr2R 4624623 intergenic not near genes chr2R 4625621 intergenic not near genes chr2R 4626619 intergenic not near genes chr2R_15_4625001 chr2R_4625001 RAL-900_125b 881 chr2R 4634157 4634179 chr2R 4634256 4634308 18 127 14.0 22.5 18.2 0.9 151 chr2R 4634157 intergenic not near genes chr2R 4634232 intergenic not near genes chr2R 4634308 intergenic not near genes chr2R_18_4630001 chr2R_4630001 RAL-900_125b 882 chr2R 4656747 4656799 chr2R 4656897 4656948 14 150 8.5 7.0 7.8 1.6 201 chr2R 4656747 intergenic not near genes chr2R 4656848 intergenic not near genes chr2R 4656948 intergenic not near genes chr2R_14_4655001 chr2R_4655001 RAL-900_125b 883 chr2R 4702453 4702501 chr2R 4702640 4702689 27 186 9.0 11.5 10.2 2.4 236 chr2R 4702453 intron Nipped-B - chr2R 4702571 intron Nipped-B - chr2R 4702689 intron Nipped-B - chr2R_27_4700001 chr2R_4700001 RAL-900_125b 884 chr2R 4750298 4750353 chr2R 4751505 4751560 1360 29 1207 14.0 9.5 11.8 2.3 1262 chr2R 4750298 intron conu + chr2R 4750929 intron conu + chr2R 4751560 intron conu + chr2R_29_4750001 chr2R_4750001 RAL-900_125b 885 chr2R 4825123 4825123 chr2R 22311215 22311218 7 17486093 33.5 26.5 30.0 0.2 17486095 chr2R 4825123 intergenic not near genes chr2R 13568170 intergenic not near genes chr2R 22311218 intron wdp - chr2R_7_13565001 chr2R_13565001 RAL-900_125b 886 chr2R 4933356 4933373 chr2R 4933954 4933987 5 606 8.5 9.5 9.0 0.5 631 chr2R 4933356 intron Ir41a + chr2R 4933672 intron Ir41a + chr2R 4933987 intron Ir41a + chr2R_5_4930001 chr2R_4930001 RAL-900_125b 887 chr2R 4933378 4933388 chr2R 4933930 4934001 5 601 4.5 6.0 5.2 0.8 623 chr2R 4933378 intron Ir41a + chr2R 4933690 intron Ir41a + chr2R 4934001 intron Ir41a + chr2R_5_4930001 chr2R_4930001 RAL-900_125b 888 chr2R 4940920 4940980 chr2R 4943420 4943480 12 2499 23.5 25.5 24.5 0.5 2560 chr2R 4940920 intron Ir41a + chr2R 4942200 intron Ir41a + chr2R 4943480 intron Ir41a + chr2R_12_4940001 chr2R_4940001 RAL-900_125b 889 chr2R 5019232 5019304 chr2R 5019368 5019440 28 135 11.5 8.5 10.0 2.5 208 chr2R 5019232 intron Ir41a + chr2R 5019336 intron Ir41a + chr2R 5019440 intron Ir41a + chr2R_28_5015001 chr2R_5015001 RAL-900_125b 890 chr2R 5038483 5038495 chr2R 5039330 5039342 8 847 16.0 0.5 8.2 0.9 859 chr2R 5038483 intergenic not near genes chr2R 5038912 intergenic not near genes chr2R 5039342 intergenic not near genes chr2R_8_5035001 chr2R_5035001 RAL-900_125b 891 chr2R 5040753 5040765 chr2R 5041287 5041305 6 539 0.0 19.0 9.5 0.6 552 chr2R 5040753 intergenic not near genes chr2R 5041029 intergenic not near genes chr2R 5041305 intergenic not near genes chr2R_6_5040001 chr2R_5040001 RAL-900_125b 892 chr2R 5123195 5123207 chr2R 5123325 5123337 5 130 19.5 11.0 15.2 0.3 142 chr2R 5123195 intron gus - chr2R 5123266 intron gus - chr2R 5123337 intron gus - chr2R_5_5120001 chr2R_5120001 RAL-900_125b 893 chr2R 5125196 5125266 chr2R 5125564 5125634 27 366 12.0 10.5 11.2 2.2 438 chr2R 5125196 intron gus - chr2R 5125415 intron gus - chr2R 5125634 intron gus - chr2R_27_5125001 chr2R_5125001 RAL-900_125b 894 chr2R 5192233 5192238 chr2R 5192344 5192382 4 135 9.0 5.5 7.2 0.5 149 chr2R 5192233 intron Nipped-A - chr2R 5192308 intron Nipped-A - chr2R 5192382 intron Nipped-A - chr2R_4_5190001 chr2R_5190001 RAL-900_125b 895 chr2R 5209733 5209809 chr2R 5210315 5210392 37 582 8.5 6.0 7.2 4.5 659 chr2R 5209733 intron Nipped-A - chr2R 5210062 intron Nipped-A - chr2R 5210392 intron Nipped-A - chr2R_37_5210001 chr2R_5210001 RAL-900_125b 896 chr2R 5237298 5237346 chr2R 5237430 5237451 29 130 12.0 0.0 6.0 4.1 153 chr2R 5237298 intron Nipped-A - chr2R 5237374 intron Nipped-A - chr2R 5237451 intron Nipped-A - chr2R_29_5235001 chr2R_5235001 RAL-900_125b 897 chr2R 5417952 5418018 chr2R 5420634 5420700 Burdock 34 2681 10.5 10.0 10.2 3.0 2748 chr2R 5417952 intron laccase2 + chr2R 5419326 intron laccase2 + chr2R 5420700 intron laccase2 + chr2R_34_5415001 chr2R_5415001 RAL-900_125b 898 chr2R 5472321 5472388 chr2R 5472465 5472532 24 139 11.0 7.5 9.2 2.4 211 chr2R 5472321 intron CG30440 - chr2R 5472426 intron CG30440 - chr2R 5472532 intron CG30440 - chr2R_24_5470001 chr2R_5470001 RAL-900_125b 899 chr2R 5475543 5475612 chr2R 5475687 5475756 31 144 1.0 6.0 3.5 6.9 213 chr2R 5475543 intron CG30440 - chr2R 5475650 intron CG30440 - chr2R 5475756 intron CG30440 - chr2R_31_5475001 chr2R_5475001 RAL-900_125b 900 chr2R 5509506 5509548 chr2R 5509652 5509694 16 145 4.0 14.0 9.0 1.6 188 chr2R 5509506 intron CG30438 + chr2R 5509600 intron CG30438 + chr2R 5509694 intron CG30438 + chr2R_16_5505001 chr2R_5505001 RAL-900_125b 901 chr2R 5543198 5543203 chr2R 5547332 5547337 invader1 5 4134 0.0 14.5 7.2 0.6 4139 chr2R 5543198 intron CG30438 + chr2R 5545268 intron CG30438 + chr2R 5547337 intron CG30438 + chr2R_5_5545001 chr2R_5545001 RAL-900_125b 902 chr2R 5543207 5543216 chr2R 5547309 5547350 invader1 5 4125 0.0 11.5 5.8 0.7 4143 chr2R 5543207 intron CG30438 + chr2R 5545278 intron CG30438 + chr2R 5547350 intron CG30438 + chr2R_5_5545001 chr2R_5545001 RAL-900_125b 903 chr2R 5549989 5550067 chr2R 5550156 5550238 31 167 8.0 3.0 5.5 4.8 249 chr2R 5549989 intergenic CG30438 + chr2R 5550114 intergenic not near genes chr2R 5550238 intergenic not near genes chr2R_31_5550001 chr2R_5550001 RAL-900_125b 904 chr2R 5581397 5581414 chr2R 5627646 5627673 12 46257 12.0 23.5 17.8 0.6 46276 chr2R 5581397 intergenic not near genes chr2R 5604535 intron Fis1 - chr2R 5627673 intergenic not near genes chr2R_12_5600001 chr2R_5600001 RAL-900_125b 905 chr2R 5649109 5649118 chr2R 5701479 5701488 6 52370 31.0 12.0 21.5 0.3 52379 chr2R 5649109 intron CG11665 - chr2R 5675298 intergenic not near genes chr2R 5701488 intergenic not near genes chr2R_6_5675001 chr2R_5675001 RAL-900_125b 906 chr2R 5714405 5714476 chr2R 5714628 5714692 16 220 8.5 0.0 4.2 3.1 287 chr2R 5714405 intron ap - chr2R 5714548 intron ap - chr2R 5714692 intron ap - chr2R_16_5710001 chr2R_5710001 RAL-900_125b 907 chr2R 5742785 5742861 chr2R 5742914 5742922 28 124 10.5 9.0 9.8 2.6 137 chr2R 5742785 intergenic not near genes chr2R 5742854 intergenic not near genes chr2R 5742922 intergenic not near genes chr2R_28_5740001 chr2R_5740001 RAL-900_125b 908 chr2R 5750408 5750411 chr2R 5750550 5750553 4 142 27.5 7.5 17.5 0.2 145 chr2R 5750408 intergenic not near genes chr2R 5750480 intergenic not near genes chr2R 5750553 intergenic not near genes chr2R_4_5750001 chr2R_5750001 RAL-900_125b 909 chr2R 5750415 5750454 chr2R 5750547 5750596 14 141 15.5 6.5 11.0 1.2 181 chr2R 5750415 intergenic not near genes chr2R 5750506 intergenic not near genes chr2R 5750596 intergenic not near genes chr2R_14_5750001 chr2R_5750001 RAL-900_125b 910 chr2R 5772480 5772548 chr2R 5772624 5772692 24 142 7.5 7.5 7.5 2.8 212 chr2R 5772480 3` UTR Gp210 + chr2R 5772586 3` UTR Gp210 + chr2R 5772692 3` UTR Gp210 + chr2R_24_5770001 chr2R_5770001 RAL-900_125b 911 chr2R 5790419 5790491 chr2R 5790554 5790626 31 135 8.5 6.5 7.5 3.6 207 chr2R 5790419 intergenic not near genes chr2R 5790522 intergenic not near genes chr2R 5790626 intergenic not near genes chr2R_31_5790001 chr2R_5790001 RAL-900_125b 912 chr2R 5863308 5863379 chr2R 5867289 5867304 36 3979 45.0 32.0 38.5 0.9 3996 chr2R 5863308 intergenic not near genes chr2R 5865306 intergenic not near genes chr2R 5867304 intergenic not near genes chr2R_36_5865001 chr2R_5865001 RAL-900_125b 913 chr2R 5863214 5863278 chr2R 5867278 5867342 29 4064 62.5 31.5 47.0 0.6 4128 chr2R 5863214 intergenic not near genes chr2R 5865278 intergenic not near genes chr2R 5867342 intergenic not near genes chr2R_29_5865001 chr2R_5865001 RAL-900_125b 914 chr2R 5869230 5869263 chr2R 5874356 5874389 flea 21 5125 20.0 7.5 13.8 1.4 5159 chr2R 5869230 intergenic not near genes chr2R 5871810 intergenic not near genes chr2R 5874389 intergenic not near genes chr2R_21_5870001 chr2R_5870001 RAL-900_125b 915 chr2R 5869264 5869299 chr2R 5874350 5874425 flea 19 5124 13.0 6.0 9.5 1.8 5161 chr2R 5869264 intergenic not near genes chr2R 5871844 intergenic not near genes chr2R 5874425 intergenic not near genes chr2R_19_5870001 chr2R_5870001 RAL-900_125b 916 chr2R 5878879 5878952 chr2R 5879009 5879082 32 130 8.0 6.5 7.2 3.9 203 chr2R 5878879 intergenic CG44438 - chr2R 5878980 intergenic CG44438 - chr2R 5879082 intergenic CG44438 - chr2R_32_5875001 chr2R_5875001 RAL-900_125b 917 chr2R 5885315 5885371 chr2R 5885494 5885550 21 179 10.5 8.5 9.5 2.0 235 chr2R 5885315 5` UTR CR44125 + chr2R 5885432 5` UTR CR44125 + chr2R 5885550 5` UTR CR44125 + chr2R_21_5885001 chr2R_5885001 RAL-900_125b 918 chr2R 5886786 5886810 chr2R 5886926 5886950 12 140 9.5 17.0 13.2 0.8 164 chr2R 5886786 intergenic CR44125 + chr2R 5886868 intergenic CR44125 + chr2R 5886950 intergenic CR44125 + chr2R_12_5885001 chr2R_5885001 RAL-900_125b 919 chr2R 5902106 5902187 chr2R 5909715 5909796 17.6 21 7609 7.0 4.5 5.8 3.1 7690 chr2R 5902106 5` UTR CG43366 + chr2R 5905951 intron CG43366 + chr2R 5909796 intron CG43366 + chr2R_21_5905001 chr2R_5905001 RAL-900_125b 920 chr2R 5917726 5917762 chr2R 5917855 5917884 18 129 18.0 8.5 13.2 1.3 158 chr2R 5917726 intron CG43366 + chr2R 5917805 intron CG43366 + chr2R 5917884 intron CG43366 + chr2R_18_5915001 chr2R_5915001 RAL-900_125b 921 chr2R 5917764 5917791 chr2R 5917853 5917917 14 123 10.5 9.0 9.8 1.3 153 chr2R 5917764 intron CG43366 + chr2R 5917840 intron CG43366 + chr2R 5917917 intron CG43366 + chr2R_14_5915001 chr2R_5915001 RAL-900_125b 922 chr2R 5936373 5936393 chr2R 5936838 5936858 10 465 15.0 17.0 16.0 0.6 485 chr2R 5936373 intergenic not near genes chr2R 5936616 intergenic not near genes chr2R 5936858 intergenic not near genes chr2R_10_5935001 chr2R_5935001 RAL-900_125b 923 chr2R 5936400 5936410 chr2R 5936834 5936875 8 461 8.0 16.5 12.2 0.6 475 chr2R 5936400 intergenic not near genes chr2R 5936638 intergenic not near genes chr2R 5936875 intergenic not near genes chr2R_8_5935001 chr2R_5935001 RAL-900_125b 924 chr2R 5947896 5947918 chr2R 5948098 5948106 5 199 19.5 0.0 9.8 0.5 210 chr2R 5947896 intergenic not near genes chr2R 5948001 intergenic not near genes chr2R 5948106 intergenic not near genes chr2R_5_5945001 chr2R_5945001 RAL-900_125b 925 chr2R 6016743 6016810 chr2R 6016877 6016944 38 134 14.5 8.5 11.5 3.0 201 chr2R 6016743 intergenic not near genes chr2R 6016844 intergenic not near genes chr2R 6016944 intergenic not near genes chr2R_38_6015001 chr2R_6015001 RAL-900_125b 926 chr2R 6088321 6088388 chr2R 6088464 6088531 31 143 10.0 9.0 9.5 3.0 210 chr2R 6088321 intergenic not near genes chr2R 6088426 intergenic not near genes chr2R 6088531 intergenic not near genes chr2R_31_6085001 chr2R_6085001 RAL-900_125b 927 chr2R 6096691 6096740 chr2R 6101923 6101937 BS 14 5235 9.5 6.5 8.0 1.6 5246 chr2R 6096691 intron EcR - chr2R 6099314 intron EcR - chr2R 6101937 intron EcR - chr2R_14_6095001 chr2R_6095001 RAL-900_125b 928 chr2R 6129284 6129343 chr2R 6129412 6129471 31 128 15.5 14.5 15.0 1.9 187 chr2R 6129284 intron EcR - chr2R 6129378 intron EcR - chr2R 6129471 intron EcR - chr2R_31_6125001 chr2R_6125001 RAL-900_125b 929 chr2R 6144363 6144433 chr2R 6144497 6144567 28 134 9.5 6.5 8.0 3.1 204 chr2R 6144363 intron EcR - chr2R 6144465 intron EcR - chr2R 6144567 intron EcR - chr2R_28_6140001 chr2R_6140001 RAL-900_125b 930 chr2R 6168163 6168222 chr2R 6168295 6168354 26 131 5.5 10.5 8.0 2.9 191 chr2R 6168163 intron EcR - chr2R 6168258 intron EcR - chr2R 6168354 intron EcR - chr2R_26_6165001 chr2R_6165001 RAL-900_125b 931 chr2R 6177787 6178084 chr2R 6178087 6178260 6 197 7.5 7.5 7.5 0.7 473 chr2R 6177787 intergenic not near genes chr2R 6178024 intergenic not near genes chr2R 6178260 intergenic not near genes chr2R_6_6175001 chr2R_6175001 RAL-900_125b 932 chr2R 6178087 6178145 chr2R 6178263 6178312 30 175 6.5 12.5 9.5 2.9 225 chr2R 6178087 intergenic not near genes chr2R 6178200 intergenic not near genes chr2R 6178312 intergenic not near genes chr2R_30_6175001 chr2R_6175001 RAL-900_125b 933 chr2R 6194642 6194683 chr2R 6194770 6194809 15 132 12.5 11.5 12.0 1.2 167 chr2R 6194642 intron Ptr - chr2R 6194726 intron Ptr - chr2R 6194809 intron Ptr - chr2R_15_6190001 chr2R_6190001 RAL-900_125b 934 chr2R 3998879 3998902 chr2R 6486806 6486834 4 2487928 32.5 25.5 29.0 0.1 2487955 chr2R 3998879 intergenic not near genes chr2R 5242856 intron Nipped-A - chr2R 6486834 intergenic not near genes chr2R_4_5240001 chr2R_5240001 RAL-900_125b 935 chr2R 6492512 6492550 chr2R 6492638 6492676 12 126 1.5 14.5 8.0 1.3 164 chr2R 6492512 intergenic not near genes chr2R 6492594 intergenic not near genes chr2R 6492676 intergenic not near genes chr2R_12_6490001 chr2R_6490001 RAL-900_125b 936 chr2R 6494492 6494506 chr2R 6499304 6499318 F-element 5 4812 20.5 10.5 15.5 0.3 4826 chr2R 6494492 intergenic not near genes chr2R 6496905 intergenic not near genes chr2R 6499318 intergenic not near genes chr2R_5_6495001 chr2R_6495001 RAL-900_125b 937 chr2R 6494507 6494548 chr2R 6499303 6499360 F-element 18 4811 10.0 10.0 10.0 1.6 4853 chr2R 6494507 intergenic not near genes chr2R 6496934 intergenic not near genes chr2R 6499360 intergenic not near genes chr2R_18_6495001 chr2R_6495001 RAL-900_125b 938 chr2R 6579734 6579801 chr2R 6584870 6584937 flea 33 5136 8.5 14.0 11.2 2.7 5203 chr2R 6579734 intron jing + chr2R 6582336 intron jing + chr2R 6584937 intron jing + chr2R_33_6580001 chr2R_6580001 RAL-900_125b 939 chr2R 6699548 6699616 chr2R 6699683 6699751 24 135 8.5 10.0 9.2 2.4 203 chr2R 6699548 intergenic Rab2 + chr2R 6699650 intergenic Rab2 + chr2R 6699751 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_24_6695001 chr2R_6695001 RAL-900_125b 940 chr2R 6706922 6706994 chr2R 6707233 6707305 32 309 7.0 8.5 7.8 3.6 383 chr2R 6706922 intron,intron CG3409 -,CG45092 - chr2R 6707114 intron,intron CG3409 -,CG45092 - chr2R 6707305 intron,intron,5` UTR CG3409 -,CG45092 -,CR43611 + chr2R_32_6705001 chr2R_6705001 RAL-900_125b 941 chr2R 6748334 6748404 chr2R 6748464 6748540 28 123 6.0 7.5 6.8 3.6 206 chr2R 6748334 exon CG3267 + chr2R 6748437 exon CG3267 + chr2R 6748540 exon CG3267 + chr2R_28_6745001 chr2R_6745001 RAL-900_125b 942 chr2R 6905102 6905162 chr2R 6905231 6905289 21 127 13.0 11.0 12.0 1.6 187 chr2R 6905102 intron CG30158 + chr2R 6905196 intron CG30158 + chr2R 6905289 intron CG30158 + chr2R_21_6905001 chr2R_6905001 RAL-900_125b 943 chr2R 6952125 6952141 chr2R 6959755 6959771 opus 8 7630 19.5 11.0 15.2 0.5 7646 chr2R 6952125 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955948 intron,intron mim -,CheB42c - chr2R 6959771 intron,intron mim -,CheB42c - chr2R_8_6955001 chr2R_6955001 RAL-900_125b 944 chr2R 6952144 6952180 chr2R 6959748 6959810 opus 12 7628 11.0 9.0 10.0 1.1 7666 chr2R 6952144 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955977 intron,intron mim -,CheB42c - chr2R 6959810 intron,intron mim -,CheB42c - chr2R_12_6955001 chr2R_6955001 RAL-900_125b 945 chr2R 6964116 6964289 chr2R 6964254 6964416 37 132 0.0 0.0 0.0 37.0 300 chr2R 6964116 intron,intron mim -,CheB42c - chr2R 6964266 intron,intron mim -,CheB42c - chr2R 6964416 intron,intron mim -,CheB42c - chr2R_37_6960001 chr2R_6960001 RAL-900_125b 946 chr2R 7102602 7102671 chr2R 7102752 7102821 38 149 4.0 7.0 5.5 5.8 219 chr2R 7102602 intron esn + chr2R 7102712 intron esn + chr2R 7102821 intron esn + chr2R_38_7100001 chr2R_7100001 RAL-900_125b 947 chr2R 7139859 7139947 chr2R 7141413 7141488 hopper2 5 1548 0.0 9.0 4.5 0.9 1629 chr2R 7139859 intergenic not near genes chr2R 7140674 intergenic not near genes chr2R 7141488 intergenic not near genes chr2R_5_7140001 chr2R_7140001 RAL-900_125b 948 chr2R 7153111 7153190 chr2R 7153247 7153326 37 135 7.5 5.5 6.5 4.9 215 chr2R 7153111 intron,exon pk +,Spn43Ab - chr2R 7153218 intron,intron pk +,Spn43Ab - chr2R 7153326 intron,intron pk +,Spn43Ab - chr2R_37_7150001 chr2R_7150001 RAL-900_125b 949 chr2R 7173737 7173809 chr2R 7174040 7174112 34 303 7.5 9.0 8.2 3.7 375 chr2R 7173737 intron pk + chr2R 7173924 intron pk + chr2R 7174112 intron pk + chr2R_34_7170001 chr2R_7170001 RAL-900_125b 950 chr2R 7196528 7196562 chr2R 7201353 7201387 F-element 19 4825 19.0 0.5 9.8 1.8 4859 chr2R 7196528 intron pk + chr2R 7198958 intron pk + chr2R 7201387 intron pk + chr2R_19_7195001 chr2R_7195001 RAL-900_125b 951 chr2R 7209859 7209869 chr2R 7217670 7217680 roo 6 7811 1.0 15.0 8.0 0.7 7821 chr2R 7209859 intron pk + chr2R 7213770 intron pk + chr2R 7217680 intron pk + chr2R_6_7210001 chr2R_7210001 RAL-900_125b 952 chr2R 7235779 7235846 chr2R 7240921 7240948 jockey 19 5138 9.5 4.5 7.0 2.4 5169 chr2R 7235779 intergenic not near genes chr2R 7238364 intergenic not near genes chr2R 7240948 intergenic not near genes chr2R_19_7235001 chr2R_7235001 RAL-900_125b 953 chr2R 7252449 7252526 chr2R 7253262 7253339 27 806 7.5 7.5 7.5 3.2 890 chr2R 7252449 intergenic not near genes chr2R 7252894 intergenic not near genes chr2R 7253339 intergenic not near genes chr2R_27_7250001 chr2R_7250001 RAL-900_125b 954 chr2R 7254570 7254597 chr2R 7254690 7254722 8 121 8.0 9.5 8.8 0.8 152 chr2R 7254570 intergenic CR45280 + chr2R 7254646 5` UTR CR45280 + chr2R 7254722 5` UTR CR45280 + chr2R_8_7250001 chr2R_7250001 RAL-900_125b 955 chr2R 7262160 7262213 chr2R 7269263 7269288 297 6 7092 5.0 14.0 9.5 0.6 7128 chr2R 7262160 intergenic not near genes chr2R 7265724 intergenic not near genes chr2R 7269288 intergenic not near genes chr2R_6_7265001 chr2R_7265001 RAL-900_125b 956 chr2R 7328077 7328151 chr2R 7328238 7328312 29 161 1.5 10.0 5.8 4.3 235 chr2R 7328077 intron,intron Dscam1 -,CR45129 + chr2R 7328194 intron,intron Dscam1 -,CR45129 + chr2R 7328312 intron,intron Dscam1 -,CR45129 + chr2R_29_7325001 chr2R_7325001 RAL-900_125b 957 chr2R 7374120 7374160 chr2R 7374324 7374338 5 198 5.5 12.5 9.0 0.5 218 chr2R 7374120 intron Dscam1 - chr2R 7374229 intron Dscam1 - chr2R 7374338 intron Dscam1 - chr2R_5_7370001 chr2R_7370001 RAL-900_125b 958 chr2R 7389521 7389596 chr2R 7389673 7389748 25 152 8.0 8.0 8.0 2.8 227 chr2R 7389521 intron CG11107 + chr2R 7389634 intron CG11107 + chr2R 7389748 intron CG11107 + chr2R_25_7385001 chr2R_7385001 RAL-900_125b 959 chr2R 7417853 7418152 chr2R 7417989 7418281 45 131 14.0 10.5 12.2 3.4 428 chr2R 7417853 intergenic not near genes chr2R 7418067 intergenic not near genes chr2R 7418281 intergenic not near genes chr2R_45_7415001 chr2R_7415001 RAL-900_125b 960 chr2R 7418156 7418168 chr2R 7418270 7418297 4 125 7.0 17.0 12.0 0.3 141 chr2R 7418156 intergenic not near genes chr2R 7418226 intergenic not near genes chr2R 7418297 intergenic not near genes chr2R_4_7415001 chr2R_7415001 RAL-900_125b 961 chr2R 7434860 7434902 chr2R 7439211 7439253 Juan 22 4350 15.0 15.5 15.2 1.4 4393 chr2R 7434860 3` UTR so + chr2R 7437056 intergenic not near genes chr2R 7439253 intergenic not near genes chr2R_22_7435001 chr2R_7435001 RAL-900_125b 962 chr2R 7608360 7608423 chr2R 7613613 7613676 I-element 28 5253 11.5 9.5 10.5 2.4 5316 chr2R 7608360 intron CG1358 - chr2R 7611018 intron CG1358 - chr2R 7613676 intron CG1358 - chr2R_28_7610001 chr2R_7610001 RAL-900_125b 963 chr2R 7629239 7629317 chr2R 7629409 7629485 30 168 4.5 7.0 5.8 4.4 246 chr2R 7629239 intron CG43340 + chr2R 7629362 intron CG43340 + chr2R 7629485 intron CG43340 + chr2R_30_7625001 chr2R_7625001 RAL-900_125b 964 chr2R 7642818 7642891 chr2R 7642948 7643021 32 129 6.5 7.0 6.8 4.1 203 chr2R 7642818 intron CG43340 + chr2R 7642920 intron CG43340 + chr2R 7643021 intron CG43340 + chr2R_32_7640001 chr2R_7640001 RAL-900_125b 965 chr2R 7737860 7737906 chr2R 7737989 7738035 24 129 13.0 8.5 10.8 2.0 175 chr2R 7737860 intergenic not near genes chr2R 7737948 intergenic not near genes chr2R 7738035 intergenic not near genes chr2R_24_7735001 chr2R_7735001 RAL-900_125b 966 chr2R 7787043 7787109 chr2R 7787175 7787241 31 131 5.5 4.0 4.8 5.3 198 chr2R 7787043 intron CanB2 + chr2R 7787142 intron CanB2 + chr2R 7787241 exon CanB2 + chr2R_31_7785001 chr2R_7785001 RAL-900_125b 967 chr2R 7815629 7815693 chr2R 7822148 7822212 Burdock 31 6518 11.0 8.0 9.5 3.0 6583 chr2R 7815629 intergenic CG1882 + chr2R 7818920 intergenic not near genes chr2R 7822212 3` UTR cathD - chr2R_31_7815001 chr2R_7815001 RAL-900_125b 968 chr2R 7862183 7862246 chr2R 7867345 7867400 flea 22 5158 6.0 10.5 8.2 2.4 5217 chr2R 7862183 intron Dgk - chr2R 7864792 intron Dgk - chr2R 7867400 intron Dgk - chr2R_22_7860001 chr2R_7860001 RAL-900_125b 969 chr2R 7869147 7869211 chr2R 7873983 7874047 Doc 25 4836 8.5 15.5 12.0 1.9 4900 chr2R 7869147 intron Dgk - chr2R 7871597 intron Dgk - chr2R 7874047 intron Dgk - chr2R_25_7870001 chr2R_7870001 RAL-900_125b 970 chr2R 7952095 7952107 chr2R 7952415 7952416 5 318 21.5 10.0 15.8 0.3 321 chr2R 7952095 intron CG14764 - chr2R 7952256 intron CG14764 - chr2R 7952416 intron CG14764 - chr2R_5_7950001 chr2R_7950001 RAL-900_125b 971 chr2R 7952109 7952165 chr2R 7952414 7952484 19 317 8.0 10.0 9.0 1.9 375 chr2R 7952109 intron CG14764 - chr2R 7952296 intron CG14764 - chr2R 7952484 intron CG14764 - chr2R_19_7950001 chr2R_7950001 RAL-900_125b 972 chr2R 8015622 8015645 chr2R 8017683 8017723 4 2068 19.5 4.0 11.8 0.3 2101 chr2R 8015622 intergenic mir-4981 + chr2R 8016672 intergenic not near genes chr2R 8017723 intergenic not near genes chr2R_4_8015001 chr2R_8015001 RAL-900_125b 973 chr2R 8015651 8015679 chr2R 8017668 8017741 10 2070 11.0 4.0 7.5 1.2 2090 chr2R 8015651 intergenic mir-4981 + chr2R 8016696 intergenic not near genes chr2R 8017741 intergenic not near genes chr2R_10_8015001 chr2R_8015001 RAL-900_125b 974 chr2R 8018075 8018148 chr2R 8018218 8018291 40 143 9.5 8.0 8.8 4.1 216 chr2R 8018075 intergenic not near genes chr2R 8018183 intergenic not near genes chr2R 8018291 intergenic not near genes chr2R_40_8015001 chr2R_8015001 RAL-900_125b 975 chr2R 8026775 8026836 chr2R 8026890 8026962 39 126 9.5 9.5 9.5 3.7 187 chr2R 8026775 intergenic CR45267 + chr2R 8026868 intergenic CR45267 + chr2R 8026962 intergenic CR45267 + chr2R_39_8025001 chr2R_8025001 RAL-900_125b 976 chr2R 8036210 8036274 chr2R 8036342 8036406 14 131 9.5 4.0 6.8 1.8 196 chr2R 8036210 intron Optix + chr2R 8036308 intron Optix + chr2R 8036406 intron Optix + chr2R_14_8035001 chr2R_8035001 RAL-900_125b 977 chr2R 8089210 8089274 chr2R 8089346 8089410 28 136 9.5 10.0 9.8 2.6 200 chr2R 8089210 3` UTR sut2 + chr2R 8089310 intergenic sut2 +,sut3 + chr2R 8089410 intergenic sut3 +,sut2 + chr2R_28_8085001 chr2R_8085001 RAL-900_125b 978 chr2R 8105897 8105909 chr2R 8106038 8106050 5 141 14.0 9.0 11.5 0.4 153 chr2R 8105897 5` UTR Cul4 - chr2R 8105974 intron Cul4 - chr2R 8106050 5` UTR Cul4 - chr2R_5_8105001 chr2R_8105001 RAL-900_125b 979 chr2R 8105911 8105960 chr2R 8106036 8106101 32 140 6.0 8.5 7.2 3.9 190 chr2R 8105911 5` UTR Cul4 - chr2R 8106006 intron Cul4 - chr2R 8106101 5` UTR Cul4 - chr2R_32_8105001 chr2R_8105001 RAL-900_125b 980 chr2R 8155533 8155613 chr2R 8155672 8155726 25 135 8.0 5.5 6.8 3.2 193 chr2R 8155533 intron,intron Lpin -,kermit - chr2R 8155630 intron,intron Lpin -,kermit - chr2R 8155726 intron,intron Lpin -,kermit - chr2R_25_8155001 chr2R_8155001 RAL-900_125b 981 chr2R 8159107 8159181 chr2R 8159653 8159705 33 544 8.0 7.5 7.8 3.7 598 chr2R 8159107 intergenic CG8708 - chr2R 8159406 3` UTR CG8708 - chr2R 8159705 exon CG8708 - chr2R_33_8155001 chr2R_8155001 RAL-900_125b 982 chr2R 8160888 8160940 chr2R 8161028 8161079 1360 16 140 10.5 12.0 11.2 1.3 191 chr2R 8160888 exon CG8708 - chr2R 8160984 intron CG8708 - chr2R 8161079 intron CG8708 - chr2R_16_8160001 chr2R_8160001 RAL-900_125b 983 chr2R 8235988 8236028 chr2R 8236119 8236158 11 130 8.0 9.5 8.8 1.1 170 chr2R 8235988 intergenic not near genes chr2R 8236073 intergenic not near genes chr2R 8236158 intergenic not near genes chr2R_11_8235001 chr2R_8235001 RAL-900_125b 984 chr2R 8330819 8330884 chr2R 8331355 8331420 roo 32 535 11.0 11.5 11.2 2.6 601 chr2R 8330819 intron pdm3 + chr2R 8331120 intron pdm3 + chr2R 8331420 intron pdm3 + chr2R_32_8330001 chr2R_8330001 RAL-900_125b 985 chr2R 8368149 8368208 chr2R 8368279 8368338 17 129 10.0 11.5 10.8 1.4 189 chr2R 8368149 intron pdm3 + chr2R 8368244 intron pdm3 + chr2R 8368338 intron pdm3 + chr2R_17_8365001 chr2R_8365001 RAL-900_125b 986 chr2R 8398182 8398230 chr2R 8402998 8403061 Doc 19 4826 7.5 5.5 6.5 2.5 4879 chr2R 8398182 intron CG2121 - chr2R 8400622 intron CG2121 - chr2R 8403061 intron CG2121 - chr2R_19_8400001 chr2R_8400001 RAL-900_125b 987 chr2R 8416271 8416303 chr2R 8417145 8417152 I-element 12 872 10.5 10.5 10.5 1.0 881 chr2R 8416271 intergenic not near genes chr2R 8416712 intergenic CG43296 - chr2R 8417152 intergenic CG43296 - chr2R_12_8415001 chr2R_8415001 RAL-900_125b 988 chr2R 8483915 8483977 chr2R 8484043 8484105 28 127 9.0 9.0 9.0 2.8 190 chr2R 8483915 intron mtt - chr2R 8484010 intron mtt - chr2R 8484105 intron mtt - chr2R_28_8480001 chr2R_8480001 RAL-900_125b 989 chr2R 8488879 8488937 chr2R 8488997 8489072 24 130 8.0 6.5 7.2 2.9 193 chr2R 8488879 intron mtt - chr2R 8488976 intron mtt - chr2R 8489072 intron mtt - chr2R_24_8485001 chr2R_8485001 RAL-900_125b 990 chr2R 8489692 8489745 chr2R 8489812 8489874 18 128 12.0 8.0 10.0 1.6 182 chr2R 8489692 intron mtt - chr2R 8489783 intron mtt - chr2R 8489874 intron mtt - chr2R_18_8485001 chr2R_8485001 RAL-900_125b 991 chr2R 8490562 8490585 chr2R 8492337 8492354 Rt1c 7 1773 9.0 12.5 10.8 0.6 1792 chr2R 8490562 intron mtt - chr2R 8491458 intron mtt - chr2R 8492354 intron mtt - chr2R_7_8490001 chr2R_8490001 RAL-900_125b 992 chr2R 8503183 8503223 chr2R 8503315 8503361 13 133 4.5 8.5 6.5 1.7 178 chr2R 8503183 intron mtt - chr2R 8503272 intron mtt - chr2R 8503361 intron mtt - chr2R_13_8500001 chr2R_8500001 RAL-900_125b 993 chr2R 8503819 8503853 chr2R 8504056 8504074 11 235 8.5 7.5 8.0 1.2 255 chr2R 8503819 intron mtt - chr2R 8503946 intron mtt - chr2R 8504074 intron mtt - chr2R_11_8500001 chr2R_8500001 RAL-900_125b 994 chr2R 8508727 8508781 chr2R 8508860 8508907 23 129 7.5 12.0 9.8 2.1 180 chr2R 8508727 intron mtt - chr2R 8508817 intron mtt - chr2R 8508907 intron mtt - chr2R_23_8505001 chr2R_8505001 RAL-900_125b 995 chr2R 8563703 8563706 chr2R 8564891 8564894 4 1188 18.5 5.5 12.0 0.3 1191 chr2R 8563703 intergenic Cyp6a14 - chr2R 8564298 3` UTR Cyp6a14 - chr2R 8564894 exon Cyp6a14 - chr2R_4_8560001 chr2R_8560001 RAL-900_125b 996 chr2R 8563711 8563773 chr2R 8564889 8564961 25 1181 6.5 5.5 6.0 3.6 1250 chr2R 8563711 intergenic Cyp6a14 - chr2R 8564336 3` UTR Cyp6a14 - chr2R 8564961 exon Cyp6a14 - chr2R_25_8560001 chr2R_8560001 RAL-900_125b 997 chr2R 8566010 8566063 chr2R 8567006 8567059 1360 20 996 8.5 12.0 10.2 1.8 1049 chr2R 8566010 5` UTR Cyp6a14 - chr2R 8566534 5` UTR Cyp6a14 - chr2R 8567059 5` UTR Cyp6a14 - chr2R_20_8565001 chr2R_8565001 RAL-900_125b 998 chr2R 8635909 8635933 chr2R 8636037 8636061 5 128 0.0 14.0 7.0 0.6 152 chr2R 8635909 intergenic not near genes chr2R 8635985 intergenic not near genes chr2R 8636061 intergenic not near genes chr2R_5_8635001 chr2R_8635001 RAL-900_125b 999 chr2R 8658218 8658231 chr2R 8658319 8658357 7 112 0.0 9.0 4.5 1.3 139 chr2R 8658218 intron ptc + chr2R 8658288 intron ptc + chr2R 8658357 intron ptc + chr2R_7_8655001 chr2R_8655001 RAL-900_125b 1000 chr2R 8658233 8658254 chr2R 8658314 8658365 7 107 2.5 8.5 5.5 1.1 132 chr2R 8658233 intron ptc + chr2R 8658299 intron ptc + chr2R 8658365 intron ptc + chr2R_7_8655001 chr2R_8655001 RAL-900_125b 1001 chr2R 8714705 8714713 chr2R 8714842 8714850 5 137 0.5 28.0 14.2 0.3 145 chr2R 8714705 3` UTR PGRP-SC1b + chr2R 8714778 3` UTR PGRP-SC1b + chr2R 8714850 3` UTR PGRP-SC1b + chr2R_5_8710001 chr2R_8710001 RAL-900_125b 1002 chr2R 8722725 8722743 chr2R 8723015 8723034 pogo 7 290 15.5 10.5 13.0 0.5 309 chr2R 8722725 intron CG14767 - chr2R 8722880 intron CG14767 - chr2R 8723034 intron CG14767 - chr2R_7_8720001 chr2R_8720001 RAL-900_125b 1003 chr2R 8722746 8722792 chr2R 8723011 8723083 pogo 21 286 7.5 10.0 8.8 2.1 337 chr2R 8722746 intron CG14767 - chr2R 8722914 intron CG14767 - chr2R 8723083 intron CG14767 - chr2R_21_8720001 chr2R_8720001 RAL-900_125b 1004 chr2R 8777874 8777944 chr2R 8784128 8784198 diver 18 6254 6.5 9.5 8.0 2.0 6324 chr2R 8777874 intergenic not near genes chr2R 8781036 intergenic not near genes chr2R 8784198 intergenic not near genes chr2R_18_8780001 chr2R_8780001 RAL-900_125b 1005 chr2R 8941521 8941590 chr2R 8941657 8941733 24 138 5.5 5.0 5.2 3.9 212 chr2R 8941521 intergenic CR44273 +,CG13748 + chr2R 8941627 5` UTR CR44273 + chr2R 8941733 5` UTR CR44273 + chr2R_24_8940001 chr2R_8940001 RAL-900_125b 1006 chr2R 8967087 8967137 chr2R 8967227 8967277 21 139 13.5 11.5 12.5 1.6 190 chr2R 8967087 intron CG8216 - chr2R 8967182 intron CG8216 - chr2R 8967277 intron CG8216 - chr2R_21_8965001 chr2R_8965001 RAL-900_125b 1007 chr2R 9071016 9071035 chr2R 9071136 9071162 5 118 11.5 18.0 14.8 0.3 146 chr2R 9071016 intron ana + chr2R 9071089 intron ana + chr2R 9071162 intron ana + chr2R_5_9070001 chr2R_9070001 RAL-900_125b 1008 chr2R 9078435 9078495 chr2R 9078563 9078623 27 128 14.0 11.0 12.5 2.0 188 chr2R 9078435 intergenic CG8083 + chr2R 9078529 intergenic CG8083 + chr2R 9078623 intergenic CG8083 + chr2R_27_9075001 chr2R_9075001 RAL-900_125b 1009 chr2R 9163293 9163342 chr2R 9165045 9165100 13 1754 9.0 9.5 9.2 1.3 1807 chr2R 9163293 intron CG8046 - chr2R 9164196 exon CG8046 - chr2R 9165100 intergenic CG8046 - chr2R_13_9160001 chr2R_9160001 RAL-900_125b 1010 chr2R 9163343 9163366 chr2R 9165044 9165122 21 1747 3.5 9.5 6.5 2.8 1779 chr2R 9163343 exon CG8046 - chr2R 9164232 exon CG8046 - chr2R 9165122 intergenic CG8046 - chr2R_21_9160001 chr2R_9160001 RAL-900_125b 1011 chr2R 9212652 9212707 chr2R 9213188 9213223 roo 15 534 9.0 5.5 7.2 1.8 571 chr2R 9212652 intergenic CR45309 + chr2R 9212938 intergenic CR45309 + chr2R 9213223 5` UTR CR45309 + chr2R_15_9210001 chr2R_9210001 RAL-900_125b 1012 chr2R 9227827 9227899 chr2R 9227963 9228009 30 134 5.0 10.5 7.8 3.4 182 chr2R 9227827 3` UTR hig - chr2R 9227918 3` UTR hig - chr2R 9228009 3` UTR hig - chr2R_30_9225001 chr2R_9225001 RAL-900_125b 1013 chr2R 9368078 9368109 chr2R 9368204 9368209 10 119 17.0 1.5 9.2 1.0 131 chr2R 9368078 intron CG13954 - chr2R 9368144 intron CG13954 - chr2R 9368209 intron CG13954 - chr2R_10_9365001 chr2R_9365001 RAL-900_125b 1014 chr2R 9368110 9368123 chr2R 9368201 9368238 6 110 14.0 2.0 8.0 0.7 128 chr2R 9368110 intron CG13954 - chr2R 9368174 intron CG13954 - chr2R 9368238 intron CG13954 - chr2R_6_9365001 chr2R_9365001 RAL-900_125b 1015 chr2R 9389939 9389971 chr2R 9390113 9390145 12 172 17.5 8.5 13.0 0.9 206 chr2R 9389939 intergenic l(2)03659 +,CG13954 - chr2R 9390042 intergenic l(2)03659 + chr2R 9390145 intergenic l(2)03659 + chr2R_12_9390001 chr2R_9390001 RAL-900_125b 1016 chr2R 9480040 9480075 chr2R 9490606 9490656 roo 18 10580 17.0 7.0 12.0 1.4 10616 chr2R 9480040 intergenic not near genes chr2R 9485348 intergenic not near genes chr2R 9490656 intergenic not near genes chr2R_18_9485001 chr2R_9485001 RAL-900_125b 1017 chr2R 9493623 9493690 chr2R 9493790 9493857 14 167 0.0 0.0 0.0 14.0 234 chr2R 9493623 intergenic not near genes chr2R 9493740 intergenic Wnt2 + chr2R 9493857 intergenic Wnt2 + chr2R_14_9490001 chr2R_9490001 RAL-900_125b 1018 chr2R 9509397 9509444 chr2R 9509521 9509578 8 132 11.5 13.5 12.5 0.6 181 chr2R 9509397 intron brp + chr2R 9509488 intron brp + chr2R 9509578 intron brp + chr2R_8_9505001 chr2R_9505001 RAL-900_125b 1019 chr2R 9616595 9616644 chr2R 9616750 9616798 18 155 7.0 11.0 9.0 1.8 203 chr2R 9616595 intron Mmp2 - chr2R 9616696 intron Mmp2 - chr2R 9616798 intron Mmp2 - chr2R_18_9615001 chr2R_9615001 RAL-900_125b 1020 chr2R 9726572 9726634 chr2R 9734173 9734235 17.6 27 7601 14.5 15.0 14.8 1.7 7663 chr2R 9726572 intron sqa - chr2R 9730404 intron sqa - chr2R 9734235 intron sqa - chr2R_27_9730001 chr2R_9730001 RAL-900_125b 1021 chr2R 9807398 9807457 chr2R 9807591 9807651 14 193 0.0 10.5 5.2 2.3 253 chr2R 9807398 intergenic not near genes chr2R 9807524 intergenic not near genes chr2R 9807651 intergenic not near genes chr2R_14_9805001 chr2R_9805001 RAL-900_125b 1022 chr2R 9871001 9871067 chr2R 9871537 9871603 roo 33 535 8.0 8.0 8.0 3.7 602 chr2R 9871001 intron cbx - chr2R 9871302 intron cbx - chr2R 9871603 intron,5` UTR cbx -,CG18446 + chr2R_33_9870001 chr2R_9870001 RAL-900_125b 1023 chr2R 9934983 9935044 chr2R 9935115 9935176 24 132 17.0 11.5 14.2 1.6 193 chr2R 9934983 intron Mef2 - chr2R 9935080 intron Mef2 - chr2R 9935176 intron Mef2 - chr2R_24_9935001 chr2R_9935001 RAL-900_125b 1024 chr2R 9945402 9945463 chr2R 9945648 9945709 BS 24 243 8.0 8.0 8.0 2.7 307 chr2R 9945402 intron Mef2 - chr2R 9945556 intron Mef2 - chr2R 9945709 intron Mef2 - chr2R_24_9945001 chr2R_9945001 RAL-900_125b 1025 chr2R 9998054 9998085 chr2R 9998198 9998229 5 144 8.0 9.0 8.5 0.5 175 chr2R 9998054 intron Pka-R2 - chr2R 9998142 intron Pka-R2 - chr2R 9998229 intron Pka-R2 - chr2R_5_9995001 chr2R_9995001 RAL-900_125b 1026 chr2R 10001470 10001546 chr2R 10001603 10001679 33 131 6.0 6.5 6.2 4.6 209 chr2R 10001470 intron Pka-R2 - chr2R 10001574 intron Pka-R2 - chr2R 10001679 intron Pka-R2 - chr2R_33_10000001 chr2R_10000001 RAL-900_125b 1027 chr2R 10005509 10005584 chr2R 10005656 10005731 27 147 5.5 6.5 6.0 3.9 222 chr2R 10005509 intron Pka-R2 - chr2R 10005620 intron Pka-R2 - chr2R 10005731 intron Pka-R2 - chr2R_27_10005001 chr2R_10005001 RAL-900_125b 1028 chr2R 10005808 10005822 chr2R 10007023 10007037 1360 8 1215 18.5 8.5 13.5 0.6 1229 chr2R 10005808 intron Pka-R2 - chr2R 10006422 intron Pka-R2 - chr2R 10007037 intron Pka-R2 - chr2R_8_10005001 chr2R_10005001 RAL-900_125b 1029 chr2R 10005823 10005875 chr2R 10007018 10007019 1360 17 1204 9.5 7.0 8.2 1.8 1196 chr2R 10005823 intron Pka-R2 - chr2R 10006421 intron Pka-R2 - chr2R 10007019 intron Pka-R2 - chr2R_17_10005001 chr2R_10005001 RAL-900_125b 1030 chr2R 10008554 10008600 chr2R 10008686 10008728 12 131 0.5 2.5 1.5 4.8 174 chr2R 10008554 intron Pka-R2 - chr2R 10008641 intron Pka-R2 - chr2R 10008728 intron Pka-R2 - chr2R_12_10005001 chr2R_10005001 RAL-900_125b 1031 chr2R 10047777 10047825 chr2R 10047910 10047958 22 133 13.5 11.5 12.5 1.6 181 chr2R 10047777 intron oys - chr2R 10047868 intron oys - chr2R 10047958 intron oys - chr2R_22_10045001 chr2R_10045001 RAL-900_125b 1032 chr2R 10053473 10053546 chr2R 10053626 10053699 26 151 9.0 7.5 8.2 2.8 226 chr2R 10053473 intron magu + chr2R 10053586 intron magu + chr2R 10053699 intron magu + chr2R_26_10050001 chr2R_10050001 RAL-900_125b 1033 chr2R 10086876 10086885 chr2R 10087022 10087030 5 146 19.0 13.5 16.2 0.3 154 chr2R 10086876 intron,exon CG2269 +,sut4 - chr2R 10086953 intron,exon CG2269 +,sut4 - chr2R 10087030 intron,5` UTR CG2269 +,sut4 - chr2R_5_10085001 chr2R_10085001 RAL-900_125b 1034 chr2R 10086891 10086934 chr2R 10087016 10087081 15 142 10.5 11.5 11.0 1.2 190 chr2R 10086891 intron,exon CG2269 +,sut4 - chr2R 10086986 intron,5` UTR CG2269 +,sut4 - chr2R 10087081 intron,5` UTR CG2269 +,sut4 - chr2R_15_10085001 chr2R_10085001 RAL-900_125b 1035 chr2R 10122659 10122714 chr2R 10122854 10122909 22 195 5.0 7.5 6.2 3.1 250 chr2R 10122659 intergenic Ccs - chr2R 10122784 intergenic Ccs - chr2R 10122909 intergenic Ccs - chr2R_22_10120001 chr2R_10120001 RAL-900_125b 1036 chr2R 10132141 10132213 chr2R 10132271 10132343 26 128 5.0 9.0 7.0 3.2 202 chr2R 10132141 exon gem + chr2R 10132242 intron gem + chr2R 10132343 exon gem + chr2R_26_10130001 chr2R_10130001 RAL-900_125b 1037 chr2R 10160501 10160563 chr2R 10160639 10160696 31 138 11.5 13.0 12.2 2.3 195 chr2R 10160501 intron KCNQ - chr2R 10160598 intron KCNQ - chr2R 10160696 intron KCNQ - chr2R_31_10160001 chr2R_10160001 RAL-900_125b 1038 chr2R 10168305 10168358 chr2R 10168432 10168479 16 124 13.0 13.0 13.0 1.1 174 chr2R 10168305 intron KCNQ - chr2R 10168392 intron KCNQ - chr2R 10168479 intron KCNQ - chr2R_16_10165001 chr2R_10165001 RAL-900_125b 1039 chr2R 10171073 10171139 chr2R 10171207 10171273 22 134 0.0 9.5 4.8 3.8 200 chr2R 10171073 intron KCNQ - chr2R 10171173 intron KCNQ - chr2R 10171273 intron KCNQ - chr2R_22_10170001 chr2R_10170001 RAL-900_125b 1040 chr2R 10176851 10176911 chr2R 10186068 10186128 roo 28 9217 8.5 9.0 8.8 2.9 9277 chr2R 10176851 intron KCNQ - chr2R 10181490 intron KCNQ - chr2R 10186128 intron KCNQ - chr2R_28_10180001 chr2R_10180001 RAL-900_125b 1041 chr2R 10193178 10193230 chr2R 10193311 10193364 21 133 8.5 8.0 8.2 2.3 186 chr2R 10193178 intergenic not near genes chr2R 10193271 intergenic not near genes chr2R 10193364 intergenic not near genes chr2R_21_10190001 chr2R_10190001 RAL-900_125b 1042 chr2R 10203592 10203659 chr2R 10203727 10203794 22 134 7.0 6.0 6.5 2.9 202 chr2R 10203592 intergenic not near genes chr2R 10203693 intergenic not near genes chr2R 10203794 intergenic not near genes chr2R_22_10200001 chr2R_10200001 RAL-900_125b 1043 chr2R 10216139 10216202 chr2R 10216267 10216330 21 127 12.0 8.0 10.0 1.9 191 chr2R 10216139 intron,intron CG12912 -,Hr46 - chr2R 10216234 intron,intron CG12912 -,Hr46 - chr2R 10216330 intron,intron CG12912 -,Hr46 - chr2R_21_10215001 chr2R_10215001 RAL-900_125b 1044 chr2R 10251324 10251392 chr2R 10251452 10251520 33 128 15.5 14.0 14.8 2.1 196 chr2R 10251324 intron,intron CG12913 +,Syb - chr2R 10251422 intron,intron CG12913 +,Syb - chr2R 10251520 intron,intron CG12913 +,Syb - chr2R_33_10250001 chr2R_10250001 RAL-900_125b 1045 chr2R 10274771 10274807 chr2R 10274898 10274933 15 127 13.5 0.5 7.0 1.9 162 chr2R 10274771 intron CAP + chr2R 10274852 intron CAP + chr2R 10274933 intron CAP + chr2R_15_10270001 chr2R_10270001 RAL-900_125b 1046 chr2R 10300604 10300679 chr2R 10300741 10300825 21 144 0.0 0.0 0.0 21.0 221 chr2R 10300604 intron CAP + chr2R 10300714 intron CAP + chr2R 10300825 intron CAP + chr2R_21_10300001 chr2R_10300001 RAL-900_125b 1047 chr2R 10307031 10307096 chr2R 10307157 10307222 28 126 9.0 12.5 10.8 2.4 191 chr2R 10307031 3` UTR JhI-1 - chr2R 10307126 3` UTR JhI-1 - chr2R 10307222 3` UTR JhI-1 - chr2R_28_10305001 chr2R_10305001 RAL-900_125b 1048 chr2R 10311567 10311640 chr2R 10312265 10312311 31 696 3.5 3.0 3.2 7.4 744 chr2R 10311567 exon Obp46a - chr2R 10311939 exon Obp46a - chr2R 10312311 intergenic Obp46a - chr2R_31_10310001 chr2R_10310001 RAL-900_125b 1049 chr2R 10313293 10313337 chr2R 10313431 10313475 20 138 0.0 2.0 1.0 10.0 182 chr2R 10313293 intergenic not near genes chr2R 10313384 intergenic not near genes chr2R 10313475 intergenic Ndg + chr2R_20_10310001 chr2R_10310001 RAL-900_125b 1050 chr2R 10322057 10322080 chr2R 10322189 10322212 15 131 6.0 12.0 9.0 1.5 155 chr2R 10322057 3` UTR Ndg + chr2R 10322134 intergenic Ndg + chr2R 10322212 intergenic Ndg + chr2R_15_10320001 chr2R_10320001 RAL-900_125b 1051 chr2R 10352627 10352696 chr2R 10352754 10352823 28 125 7.5 10.5 9.0 2.8 196 chr2R 10352627 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352725 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352823 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_28_10350001 chr2R_10350001 RAL-900_125b 1052 chr2R 10387983 10387999 chr2R 10388120 10388145 6 145 0.0 11.0 5.5 0.9 162 chr2R 10387983 intron CG42732 - chr2R 10388064 intron CG42732 - chr2R 10388145 intron CG42732 - chr2R_6_10385001 chr2R_10385001 RAL-900_125b 1053 chr2R 10468981 10469048 chr2R 10469157 10469214 24 176 9.0 10.0 9.5 2.3 233 chr2R 10468981 intron CG11777 + chr2R 10469098 intron CG11777 + chr2R 10469214 exon CG11777 + chr2R_24_10465001 chr2R_10465001 RAL-900_125b 1054 chr2R 10477116 10477128 chr2R 10477506 10477518 7 389 12.0 0.0 6.0 1.0 402 chr2R 10477116 intron whd - chr2R 10477317 intron whd - chr2R 10477518 intron whd - chr2R_7_10475001 chr2R_10475001 RAL-900_125b 1055 chr2R 10477129 10477163 chr2R 10477502 10477518 8 382 7.5 0.0 3.8 1.7 389 chr2R 10477129 intron whd - chr2R 10477324 intron whd - chr2R 10477518 intron whd - chr2R_8_10475001 chr2R_10475001 RAL-900_125b 1056 chr2R 10550611 10550667 chr2R 10550724 10550793 28 124 3.5 1.0 2.2 8.8 182 chr2R 10550611 intergenic not near genes chr2R 10550702 intergenic not near genes chr2R 10550793 intergenic not near genes chr2R_28_10550001 chr2R_10550001 RAL-900_125b 1057 chr2R 10571568 10571656 chr2R 10571700 10571783 18 130 0.0 0.0 0.0 18.0 215 chr2R 10571568 intron psq + chr2R 10571676 intron psq + chr2R 10571783 intron psq + chr2R_18_10570001 chr2R_10570001 RAL-900_125b 1058 chr2R 10574592 10574606 chr2R 10574724 10574738 6 132 19.5 18.0 18.8 0.3 146 chr2R 10574592 intron psq + chr2R 10574665 intron psq + chr2R 10574738 intron psq + chr2R_6_10570001 chr2R_10570001 RAL-900_125b 1059 chr2R 10585511 10585584 chr2R 10594144 10594203 Tirant 4 8630 10.0 8.0 9.0 0.4 8692 chr2R 10585511 intron psq + chr2R 10589857 intron psq + chr2R 10594203 intron psq + chr2R_4_10585001 chr2R_10585001 RAL-900_125b 1060 chr2R 10622310 10622342 chr2R 10637124 10637131 mdg1 7 14810 13.5 8.0 10.8 0.6 14821 chr2R 10622310 intron CG11883 + chr2R 10629720 intron CG11883 + chr2R 10637131 intron CG11883 + chr2R_7_10625001 chr2R_10625001 RAL-900_125b 1061 chr2R 10658008 10658038 chr2R 10658150 10658180 20 141 15.5 6.5 11.0 1.7 172 chr2R 10658008 intergenic CR44452 - chr2R 10658094 intergenic not near genes chr2R 10658180 intergenic not near genes chr2R_20_10655001 chr2R_10655001 RAL-900_125b 1062 chr2R 10658043 10658073 chr2R 10658146 10658215 14 136 10.5 5.0 7.8 1.6 172 chr2R 10658043 intergenic CR44452 - chr2R 10658129 intergenic not near genes chr2R 10658215 intergenic not near genes chr2R_14_10655001 chr2R_10655001 RAL-900_125b 1063 chr2R 10658888 10658896 chr2R 10659023 10659031 5 135 21.0 0.0 10.5 0.4 143 chr2R 10658888 intergenic not near genes chr2R 10658960 intergenic not near genes chr2R 10659031 intergenic not near genes chr2R_5_10655001 chr2R_10655001 RAL-900_125b 1064 chr2R 10659021 10659031 chr2R 10666681 10666691 mdg1 10 7660 0.0 11.0 5.5 1.5 7670 chr2R 10659021 intergenic not near genes chr2R 10662856 intergenic not near genes chr2R 10666691 intergenic not near genes chr2R_10_10660001 chr2R_10660001 RAL-900_125b 1065 chr2R 10693825 10693878 chr2R 10693941 10693979 18 124 8.5 7.0 7.8 2.0 154 chr2R 10693825 intron stan + chr2R 10693902 intron stan + chr2R 10693979 intron stan + chr2R_18_10690001 chr2R_10690001 RAL-900_125b 1066 chr2R 10697269 10697341 chr2R 10697405 10697477 21 136 8.5 8.5 8.5 2.2 208 chr2R 10697269 intron stan + chr2R 10697373 intron stan + chr2R 10697477 intron stan + chr2R_21_10695001 chr2R_10695001 RAL-900_125b 1067 chr2R 10698055 10698119 chr2R 10698183 10698242 25 124 7.5 8.5 8.0 2.8 187 chr2R 10698055 intron stan + chr2R 10698148 intron stan + chr2R 10698242 intron stan + chr2R_25_10695001 chr2R_10695001 RAL-900_125b 1068 chr2R 10757662 10757715 chr2R 10757794 10757852 34 136 0.0 12.0 6.0 4.9 190 chr2R 10757662 intron CG33144 - chr2R 10757757 intron CG33144 - chr2R 10757852 intron CG33144 - chr2R_34_10755001 chr2R_10755001 RAL-900_125b 1069 chr2R 10758978 10758990 chr2R 10759115 10759127 8 137 6.5 11.0 8.8 0.8 149 chr2R 10758978 intron CG33144 - chr2R 10759052 intron CG33144 - chr2R 10759127 intron CG33144 - chr2R_8_10755001 chr2R_10755001 RAL-900_125b 1070 chr2R 10761508 10761585 chr2R 10761712 10761789 28 204 3.5 5.0 4.2 5.4 281 chr2R 10761508 intron,5` UTR CG33144 -,CR43605 + chr2R 10761648 intron,5` UTR CG33144 -,CR43605 + chr2R 10761789 intron CG33144 - chr2R_28_10760001 chr2R_10760001 RAL-900_125b 1071 chr2R 10770947 10771020 chr2R 10771078 10771151 20 131 6.0 12.0 9.0 2.0 204 chr2R 10770947 intron CG33144 - chr2R 10771049 intron CG33144 - chr2R 10771151 intron CG33144 - chr2R_20_10770001 chr2R_10770001 RAL-900_125b 1072 chr2R 10848274 10848315 chr2R 10848427 10848466 6 152 7.5 8.5 8.0 0.7 192 chr2R 10848274 intron CG30015 - chr2R 10848370 intron CG30015 - chr2R 10848466 exon CG30015 - chr2R_6_10845001 chr2R_10845001 RAL-900_125b 1073 chr2R 10948015 10948024 chr2R 10955613 10955622 17.6 5 7598 0.0 10.0 5.0 0.8 7607 chr2R 10948015 intergenic not near genes chr2R 10951818 intergenic not near genes chr2R 10955622 intergenic not near genes chr2R_5_10950001 chr2R_10950001 RAL-900_125b 1074 chr2R 10948025 10948040 chr2R 10955608 10955638 17.6 11 7593 1.0 10.0 5.5 1.7 7613 chr2R 10948025 intergenic not near genes chr2R 10951832 intergenic not near genes chr2R 10955638 intergenic not near genes chr2R_11_10950001 chr2R_10950001 RAL-900_125b 1075 chr2R 10948042 10948057 chr2R 10955590 10955643 17.6 5 7581 1.0 7.5 4.2 1.0 7601 chr2R 10948042 intergenic not near genes chr2R 10951842 intergenic not near genes chr2R 10955643 intergenic not near genes chr2R_5_10950001 chr2R_10950001 RAL-900_125b 1076 chr2R 10959040 10959103 chr2R 10959169 10959232 34 129 0.0 8.5 4.2 6.5 192 chr2R 10959040 intergenic not near genes chr2R 10959136 intergenic not near genes chr2R 10959232 intergenic not near genes chr2R_34_10955001 chr2R_10955001 RAL-900_125b 1077 chr2R 10979617 10979683 chr2R 10980138 10980194 297 20 518 9.0 11.5 10.2 1.8 577 chr2R 10979617 intergenic not near genes chr2R 10979906 intergenic not near genes chr2R 10980194 intergenic not near genes chr2R_20_10975001 chr2R_10975001 RAL-900_125b 1078 chr2R 10985047 10985114 chr2R 10985181 10985243 19 133 9.5 10.5 10.0 1.7 196 chr2R 10985047 intron luna - chr2R 10985145 intron luna - chr2R 10985243 intron luna - chr2R_19_10985001 chr2R_10985001 RAL-900_125b 1079 chr2R 11009774 11009845 chr2R 11018998 11019027 roo 25 9218 6.0 7.0 6.5 3.3 9253 chr2R 11009774 intron luna - chr2R 11014400 intron luna - chr2R 11019027 intron luna - chr2R_25_11010001 chr2R_11010001 RAL-900_125b 1080 chr2R 11019838 11019872 chr2R 11024954 11024988 jockey 14 5116 12.0 7.5 9.8 1.3 5150 chr2R 11019838 intron luna - chr2R 11022413 intron luna - chr2R 11024988 intron luna - chr2R_14_11020001 chr2R_11020001 RAL-900_125b 1081 chr2R 11019876 11019900 chr2R 11024943 11025016 jockey 11 5103 8.0 5.5 6.8 1.4 5140 chr2R 11019876 intron luna - chr2R 11022446 intron luna - chr2R 11025016 intron luna - chr2R_11_11020001 chr2R_11020001 RAL-900_125b 1082 chr2R 11044118 11044163 chr2R 11044254 11044287 15 121 9.5 18.0 13.8 1.0 169 chr2R 11044118 intron luna - chr2R 11044202 intron luna - chr2R 11044287 intron luna - chr2R_15_11040001 chr2R_11040001 RAL-900_125b 1083 chr2R 11081046 11081070 chr2R 11081157 11081157 6 108 18.0 19.0 18.5 0.3 111 chr2R 11081046 intron luna - chr2R 11081102 intron luna - chr2R 11081157 intron luna - chr2R_6_11080001 chr2R_11080001 RAL-900_125b 1084 chr2R 11081072 11081076 chr2R 11081154 11081203 4 98 18.0 18.0 18.0 0.2 131 chr2R 11081072 intron luna - chr2R 11081138 intron luna - chr2R 11081203 intron luna - chr2R_4_11080001 chr2R_11080001 RAL-900_125b 1085 chr2R 11102819 11102899 chr2R 11102951 11103031 20 131 7.0 0.0 3.5 4.4 212 chr2R 11102819 intron luna - chr2R 11102925 intron luna - chr2R 11103031 intron luna - chr2R_20_11100001 chr2R_11100001 RAL-900_125b 1086 chr2R 11129215 11129285 chr2R 11129451 11129520 33 233 4.5 10.5 7.5 3.9 305 chr2R 11129215 intergenic not near genes chr2R 11129368 intergenic not near genes chr2R 11129520 intergenic not near genes chr2R_33_11125001 chr2R_11125001 RAL-900_125b 1087 chr2R 11134090 11134137 chr2R 11134370 11134428 pogo 23 291 6.0 14.0 10.0 2.1 338 chr2R 11134090 intergenic not near genes chr2R 11134259 intergenic not near genes chr2R 11134428 intergenic not near genes chr2R_23_11130001 chr2R_11130001 RAL-900_125b 1088 chr2R 11150132 11150195 chr2R 11150258 11150321 27 126 12.5 8.5 10.5 2.3 189 chr2R 11150132 intron CG13229 - chr2R 11150226 intron CG13229 - chr2R 11150321 intron CG13229 - chr2R_27_11150001 chr2R_11150001 RAL-900_125b 1089 chr2R 11150763 11150823 chr2R 11150889 11150953 6 127 8.5 0.0 4.2 1.2 190 chr2R 11150763 intron CG13229 - chr2R 11150858 intron CG13229 - chr2R 11150953 intron CG13229 - chr2R_6_11150001 chr2R_11150001 RAL-900_125b 1090 chr2R 11154161 11154210 chr2R 11154325 11154374 15 164 12.5 8.5 10.5 1.3 213 chr2R 11154161 intron CG13229 - chr2R 11154268 intron CG13229 - chr2R 11154374 intron CG13229 - chr2R_15_11150001 chr2R_11150001 RAL-900_125b 1091 chr2R 11166252 11166266 chr2R 11166381 11166395 9 129 19.0 0.0 9.5 0.9 143 chr2R 11166252 intron,intron CG13229 -,shn + chr2R 11166324 intron,intron CG13229 -,shn + chr2R 11166395 intron,intron CG13229 -,shn + chr2R_9_11165001 chr2R_11165001 RAL-900_125b 1092 chr2R 11179223 11179281 chr2R 11179359 11179365 20 133 14.0 14.0 14.0 1.3 142 chr2R 11179223 intron shn + chr2R 11179294 intron shn + chr2R 11179365 intron shn + chr2R_20_11175001 chr2R_11175001 RAL-900_125b 1093 chr2R 11184642 11184686 chr2R 11184769 11184813 16 127 11.5 12.0 11.8 1.2 171 chr2R 11184642 intron shn + chr2R 11184728 intron shn + chr2R 11184813 intron shn + chr2R_16_11180001 chr2R_11180001 RAL-900_125b 1094 chr2R 11207782 11207788 chr2R 11208025 11208031 BS 7 243 24.5 17.5 21.0 0.3 249 chr2R 11207782 intron shn + chr2R 11207906 intron shn + chr2R 11208031 intron shn + chr2R_7_11205001 chr2R_11205001 RAL-900_125b 1095 chr2R 11207800 11207837 chr2R 11208023 11208080 BS 13 240 15.0 17.5 16.2 0.8 280 chr2R 11207800 intron shn + chr2R 11207940 intron shn + chr2R 11208080 intron shn + chr2R_13_11205001 chr2R_11205001 RAL-900_125b 1096 chr2R 11297589 11297637 chr2R 11301963 11302005 flea 20 4373 3.5 0.0 1.8 7.1 4416 chr2R 11297589 intergenic CG42336 - chr2R 11299797 intergenic not near genes chr2R 11302005 5` UTR CG7741 + chr2R_20_11295001 chr2R_11295001 RAL-900_125b 1097 chr2R 11344102 11344153 chr2R 11344248 11344299 26 145 0.0 17.5 8.8 2.7 197 chr2R 11344102 intergenic alphaTry - chr2R 11344200 intergenic alphaTry - chr2R 11344299 3` UTR alphaTry - chr2R_26_11340001 chr2R_11340001 RAL-900_125b 1098 chr2R 8687503 8687503 chr2R 11345321 11345375 5 2657843 11.5 28.5 20.0 0.2 2657872 chr2R 8687503 intergenic not near genes chr2R 10016439 intron Pka-R2 - chr2R 11345375 exon epsilonTry - chr2R_5_10015001 chr2R_10015001 RAL-900_125b 1099 chr2R 11366116 11366132 chr2R 11366245 11366254 4 127 16.5 6.0 11.2 0.3 138 chr2R 11366116 intergenic not near genes chr2R 11366185 intergenic not near genes chr2R 11366254 intergenic CG13204 + chr2R_4_11365001 chr2R_11365001 RAL-900_125b 1100 chr2R 11366135 11366172 chr2R 11366243 11366301 14 124 11.5 6.0 8.8 1.4 166 chr2R 11366135 intergenic not near genes chr2R 11366218 intergenic CG13204 + chr2R 11366301 intergenic CG13204 + chr2R_14_11365001 chr2R_11365001 RAL-900_125b 1101 chr2R 11368005 11368057 chr2R 11368131 11368183 22 126 11.0 14.5 12.8 1.6 178 chr2R 11368005 intron CG13204 + chr2R 11368094 intron CG13204 + chr2R 11368183 intron CG13204 + chr2R_22_11365001 chr2R_11365001 RAL-900_125b 1102 chr2R 11415474 11415533 chr2R 11418671 11418732 opus 25 3197 9.5 10.5 10.0 2.3 3258 chr2R 11415474 intron Drip - chr2R 11417103 intron Drip - chr2R 11418732 intron Drip - chr2R_25_11415001 chr2R_11415001 RAL-900_125b 1103 chr2R 11415541 11415545 chr2R 11418670 11418744 opus 6 3181 7.0 10.5 8.8 0.6 3203 chr2R 11415541 intron Drip - chr2R 11417142 intron Drip - chr2R 11418744 intron Drip - chr2R_6_11415001 chr2R_11415001 RAL-900_125b 1104 chr2R 11419817 11419884 chr2R 11419997 11420064 22 179 9.0 13.0 11.0 1.8 247 chr2R 11419817 intron Drip - chr2R 11419940 intron Drip - chr2R 11420064 intron Drip - chr2R_22_11415001 chr2R_11415001 RAL-900_125b 1105 chr2R 11429842 11429937 chr2R 11430027 11430102 13 170 0.0 2.5 1.2 5.9 260 chr2R 11429842 intergenic Drip - chr2R 11429972 intergenic Drip - chr2R 11430102 intergenic Drip - chr2R_13_11425001 chr2R_11425001 RAL-900_125b 1106 chr2R 11472603 11472615 chr2R 11473850 11473862 pogo 9 1246 19.5 9.5 14.5 0.6 1259 chr2R 11472603 intergenic not near genes chr2R 11473232 intergenic not near genes chr2R 11473862 intergenic not near genes chr2R_9_11470001 chr2R_11470001 RAL-900_125b 1107 chr2R 11472617 11472669 chr2R 11473849 11473916 pogo 21 1244 8.0 9.5 8.8 2.1 1299 chr2R 11472617 intergenic not near genes chr2R 11473266 intergenic not near genes chr2R 11473916 intergenic not near genes chr2R_21_11470001 chr2R_11470001 RAL-900_125b 1108 chr2R 11498790 11498854 chr2R 11498963 11499043 6 178 11.5 1.5 6.5 0.8 253 chr2R 11498790 intron inv + chr2R 11498916 intron inv + chr2R 11499043 intron inv + chr2R_6_11495001 chr2R_11495001 RAL-900_125b 1109 chr2R 11574999 11575037 chr2R 11575148 11575182 9 146 0.0 8.0 4.0 1.8 183 chr2R 11574999 intergenic not near genes chr2R 11575090 intergenic not near genes chr2R 11575182 intergenic not near genes chr2R_9_11575001 chr2R_11575001 RAL-900_125b 1110 chr2R 11625272 11625277 chr2R 11625400 11625405 4 128 9.0 0.0 4.5 0.7 133 chr2R 11625272 5` UTR CG9005 - chr2R 11625338 intron CG9005 - chr2R 11625405 intron CG9005 - chr2R_4_11625001 chr2R_11625001 RAL-900_125b 1111 chr2R 11631326 11631413 chr2R 11631477 11631543 22 133 0.0 6.0 3.0 5.5 217 chr2R 11631326 intron CG9005 - chr2R 11631434 intron CG9005 - chr2R 11631543 intron CG9005 - chr2R_22_11630001 chr2R_11630001 RAL-900_125b 1112 chr2R 11681493 11681529 chr2R 11684036 11684072 23 2542 19.5 40.0 29.8 0.7 2579 chr2R 11681493 intron Buffy + chr2R 11682782 intron Buffy + chr2R 11684072 intron Buffy + chr2R_23_11680001 chr2R_11680001 RAL-900_125b 1113 chr2R 11681511 11681581 chr2R 11684448 11684518 14 2938 19.5 57.0 38.2 0.4 3007 chr2R 11681511 intron Buffy + chr2R 11683014 intron Buffy + chr2R 11684518 intron,exon Buffy +,CG13196 - chr2R_14_11680001 chr2R_11680001 RAL-900_125b 1114 chr2R 11724106 11724177 chr2R 11724239 11724310 25 132 8.5 8.5 8.5 2.6 204 chr2R 11724106 intron pyr + chr2R 11724208 intron pyr + chr2R 11724310 exon pyr + chr2R_25_11720001 chr2R_11720001 RAL-900_125b 1115 chr2R 11772660 11772686 chr2R 11772787 11772813 9 127 10.0 8.5 9.2 0.9 153 chr2R 11772660 intron ths + chr2R 11772736 intron ths + chr2R 11772813 intron ths + chr2R_9_11770001 chr2R_11770001 RAL-900_125b 1116 chr2R 11822930 11822999 chr2R 11823057 11823094 14 121 0.0 6.5 3.2 3.3 164 chr2R 11822930 intergenic not near genes chr2R 11823012 intergenic not near genes chr2R 11823094 intergenic not near genes chr2R_14_11820001 chr2R_11820001 RAL-900_125b 1117 chr2R 11826845 11826850 chr2R 11827006 11827012 7 161 25.5 9.0 17.2 0.4 167 chr2R 11826845 3` UTR CG13192 + chr2R 11826928 3` UTR CG13192 + chr2R 11827012 3` UTR CG13192 + chr2R_7_11825001 chr2R_11825001 RAL-900_125b 1118 chr2R 11826854 11826916 chr2R 11827001 11827078 21 161 8.0 7.5 7.8 2.4 224 chr2R 11826854 3` UTR CG13192 + chr2R 11826966 3` UTR CG13192 + chr2R 11827078 3` UTR CG13192 + chr2R_21_11825001 chr2R_11825001 RAL-900_125b 1119 chr2R 11863810 11863883 chr2R 11863947 11864020 29 136 11.5 7.5 9.5 2.8 210 chr2R 11863810 intergenic CG42531 + chr2R 11863915 intergenic CG42531 + chr2R 11864020 intergenic CG42531 + chr2R_29_11860001 chr2R_11860001 RAL-900_125b 1120 chr2R 11929731 11929798 chr2R 11929974 11930041 31 243 8.0 6.0 7.0 3.9 310 chr2R 11929731 3` UTR CR44312 - chr2R 11929886 intergenic CR44312 - chr2R 11930041 intergenic CR44312 - chr2R_31_11925001 chr2R_11925001 RAL-900_125b 1121 chr2R 11945836 11945906 chr2R 11945963 11946033 32 127 9.5 5.0 7.2 3.9 197 chr2R 11945836 intron CG13188 + chr2R 11945934 intron CG13188 + chr2R 11946033 intron CG13188 + chr2R_32_11945001 chr2R_11945001 RAL-900_125b 1122 chr2R 8518790 8518792 chr2R 12066134 12066177 7 3547351 44.0 23.0 33.5 0.2 3547387 chr2R 8518790 intron mtt - chr2R 10292484 intron CAP + chr2R 12066177 intron CG8888 - chr2R_7_10290001 chr2R_10290001 RAL-900_125b 1123 chr2R 12093907 12093975 chr2R 12094070 12094139 18 162 6.5 5.5 6.0 2.6 232 chr2R 12093907 intron jeb - chr2R 12094023 intron jeb - chr2R 12094139 intron jeb - chr2R_18_12090001 chr2R_12090001 RAL-900_125b 1124 chr2R 12108053 12108071 chr2R 12108208 12108226 14 154 14.0 0.0 7.0 1.8 173 chr2R 12108053 intron jeb - chr2R 12108140 intron jeb - chr2R 12108226 intron jeb - chr2R_14_12105001 chr2R_12105001 RAL-900_125b 1125 chr2R 12146433 12146440 chr2R 12147605 12147611 7 1171 60.5 50.0 55.2 0.1 1178 chr2R 12146433 intron,3` UTR Hen1 +,CG8878 - chr2R 12147022 intron,exon Hen1 +,CG8878 - chr2R 12147611 intron,exon Hen1 +,CG8878 - chr2R_7_12145001 chr2R_12145001 RAL-900_125b 1126 chr2R 12146442 12146496 chr2R 12147593 12147661 24 1164 49.5 44.5 47.0 0.5 1219 chr2R 12146442 intron,3` UTR Hen1 +,CG8878 - chr2R 12147052 intron,exon Hen1 +,CG8878 - chr2R 12147661 intron,exon Hen1 +,CG8878 - chr2R_24_12145001 chr2R_12145001 RAL-900_125b 1127 chr2R 12145931 12145986 chr2R 12148574 12148629 20 2645 67.0 55.0 61.0 0.3 2698 chr2R 12145931 exon Hen1 + chr2R 12147280 intron,intron Hen1 +,CG8878 - chr2R 12148629 intron,exon Hen1 +,CG8878 - chr2R_20_12145001 chr2R_12145001 RAL-900_125b 1128 chr2R 12185957 12186031 chr2R 12186102 12186176 55 144 13.5 15.5 14.5 3.5 219 chr2R 12185957 intron Cyp6g1 + chr2R 12186066 intron Cyp6g1 + chr2R 12186176 intron Cyp6g1 + chr2R_55_12185001 chr2R_12185001 RAL-900_125b 1129 chr2R 12185226 12185261 chr2R 12188101 12188136 15 2875 32.5 220.0 126.2 0.1 2910 chr2R 12185226 3` UTR,exon CG13175 +,CG33964 + chr2R 12186681 exon Cyp6g1 + chr2R 12188136 exon Cyp6g1 + chr2R_15_12185001 chr2R_12185001 RAL-900_125b 1130 chr2R 12185224 12185268 chr2R 12188137 12188143 4 2884 31.5 206.0 118.8 0.0 2919 chr2R 12185224 3` UTR,exon CG13175 +,CG33964 + chr2R 12186684 exon Cyp6g1 + chr2R 12188143 3` UTR Cyp6g1 + chr2R_4_12185001 chr2R_12185001 RAL-900_125b 1131 chr2R 12189354 12189409 chr2R 12189596 12189652 6 233 148.5 141.5 145.0 0.0 298 chr2R 12189354 exon Cyp6g2 - chr2R 12189503 exon Cyp6g2 - chr2R 12189652 exon Cyp6g2 - chr2R_6_12185001 chr2R_12185001 RAL-900_125b 1132 chr2R 12187483 12187488 chr2R 12190049 12190054 5 2566 129.5 142.5 136.0 0.0 2571 chr2R 12187483 exon Cyp6g1 + chr2R 12188768 exon Cyp6g2 - chr2R 12190054 exon Cyp6g2 - chr2R_5_12185001 chr2R_12185001 RAL-900_125b 1133 chr2R 12187481 12187501 chr2R 12190058 12190092 48 2572 146.0 135.0 140.5 0.3 2611 chr2R 12187481 exon Cyp6g1 + chr2R 12188786 exon Cyp6g2 - chr2R 12190092 exon Cyp6g2 - chr2R_48_12185001 chr2R_12185001 RAL-900_125b 1134 chr2R 12187477 12187506 chr2R 12190093 12190122 50 2582 150.5 98.0 124.2 0.4 2645 chr2R 12187477 exon Cyp6g1 + chr2R 12188800 exon Cyp6g2 - chr2R 12190122 exon Cyp6g2 - chr2R_50_12185001 chr2R_12185001 RAL-900_125b 1135 chr2R 12213850 12213862 chr2R 12213979 12213991 8 129 5.0 7.5 6.2 1.1 141 chr2R 12213850 intergenic CG13171 + chr2R 12213920 intergenic CG13171 + chr2R 12213991 intergenic CG13171 + chr2R_8_12210001 chr2R_12210001 RAL-900_125b 1136 chr2R 12217525 12217596 chr2R 12217656 12217727 26 128 5.0 7.0 6.0 3.7 202 chr2R 12217525 intergenic not near genes chr2R 12217626 intergenic not near genes chr2R 12217727 intergenic not near genes chr2R_26_12215001 chr2R_12215001 RAL-900_125b 1137 chr2R 12284264 12284327 chr2R 12284398 12284461 19 134 0.0 9.0 4.5 3.5 197 chr2R 12284264 intron CG42700 + chr2R 12284362 intron CG42700 + chr2R 12284461 intron CG42700 + chr2R_19_12280001 chr2R_12280001 RAL-900_125b 1138 chr2R 12320677 12320728 chr2R 12320987 12321038 22 310 16.0 13.0 14.5 1.4 361 chr2R 12320677 3` UTR CR44316 - chr2R 12320858 intron CR44316 - chr2R 12321038 intergenic CR44316 -,CG13163 + chr2R_22_12320001 chr2R_12320001 RAL-900_125b 1139 chr2R 12334843 12334856 chr2R 12334971 12334984 9 128 20.5 11.5 16.0 0.5 141 chr2R 12334843 intergenic CG8490 + chr2R 12334914 intergenic CG8490 + chr2R 12334984 intergenic CG8490 + chr2R_9_12330001 chr2R_12330001 RAL-900_125b 1140 chr2R 12363338 12363409 chr2R 12363820 12363891 26 480 13.0 6.0 9.5 2.5 553 chr2R 12363338 intergenic CG30043 + chr2R 12363614 intergenic CG30043 + chr2R 12363891 intergenic not near genes chr2R_26_12360001 chr2R_12360001 RAL-900_125b 1141 chr2R 12417426 12417486 chr2R 12417541 12417571 24 114 5.0 8.5 6.8 3.1 145 chr2R 12417426 exon CG13157 + chr2R 12417498 exon CG13157 + chr2R 12417571 exon CG13157 + chr2R_24_12415001 chr2R_12415001 RAL-900_125b 1142 chr2R 12479076 12479152 chr2R 12479214 12479291 20 137 8.5 7.5 8.0 2.2 215 chr2R 12479076 intron Dh44-R2 + chr2R 12479184 intron Dh44-R2 + chr2R 12479291 intron Dh44-R2 + chr2R_20_12475001 chr2R_12475001 RAL-900_125b 1143 chr2R 12481147 12481163 chr2R 12482956 12482982 roo 6 1834 3.5 10.0 6.8 0.8 1835 chr2R 12481147 exon Dh44-R2 + chr2R 12482064 intron Dh44-R2 + chr2R 12482982 intron Dh44-R2 + chr2R_6_12480001 chr2R_12480001 RAL-900_125b 1144 chr2R 12492060 12492122 chr2R 12492186 12492226 27 136 6.5 3.5 5.0 4.5 166 chr2R 12492060 intron fdl - chr2R 12492143 intron fdl - chr2R 12492226 intron fdl - chr2R_27_12490001 chr2R_12490001 RAL-900_125b 1145 chr2R 12501684 12501713 chr2R 12503856 12503925 Rt1c 15 2199 11.5 7.0 9.2 1.5 2241 chr2R 12501684 intron fdl - chr2R 12502804 intron fdl - chr2R 12503925 intron fdl - chr2R_15_12500001 chr2R_12500001 RAL-900_125b 1146 chr2R 12529860 12529938 chr2R 12530003 12530081 20 143 6.5 0.5 3.5 4.4 221 chr2R 12529860 intron fra + chr2R 12529970 intron fra + chr2R 12530081 intron fra + chr2R_20_12525001 chr2R_12525001 RAL-900_125b 1147 chr2R 12535792 12535863 chr2R 12535922 12535994 26 127 11.0 10.0 10.5 2.3 202 chr2R 12535792 intron fra + chr2R 12535893 intron fra + chr2R 12535994 intron fra + chr2R_26_12535001 chr2R_12535001 RAL-900_125b 1148 chr2R 12548467 12548543 chr2R 12548594 12548670 23 127 2.5 6.5 4.5 4.2 203 chr2R 12548467 intron fra + chr2R 12548568 intron fra + chr2R 12548670 intron fra + chr2R_23_12545001 chr2R_12545001 RAL-900_125b 1149 chr2R 12565514 12565592 chr2R 12565944 12565991 29 400 0.0 4.0 2.0 9.7 477 chr2R 12565514 intergenic not near genes chr2R 12565752 intergenic Cyp301a1 + chr2R 12565991 intergenic Cyp301a1 + chr2R_29_12565001 chr2R_12565001 RAL-900_125b 1150 chr2R 12627420 12627501 chr2R 12627573 12627644 19 151 0.0 7.5 3.8 4.0 224 chr2R 12627420 intron CG17760 + chr2R 12627532 intron CG17760 + chr2R 12627644 exon CG17760 + chr2R_19_12625001 chr2R_12625001 RAL-900_125b 1151 chr2R 12677373 12677406 chr2R 12677507 12677540 14 134 0.5 17.0 8.8 1.4 167 chr2R 12677373 intron CG42708 - chr2R 12677456 intron CG42708 - chr2R 12677540 intron CG42708 - chr2R_14_12675001 chr2R_12675001 RAL-900_125b 1152 chr2R 12707472 12707548 chr2R 12715888 12715964 roo 30 8415 6.5 4.0 5.2 4.8 8492 chr2R 12707472 intron CG42663 + chr2R 12711718 intron CG42663 + chr2R 12715964 intron CG42663 + chr2R_30_12710001 chr2R_12710001 RAL-900_125b 1153 chr2R 12728823 12728859 chr2R 12729009 12729057 7 193 0.0 15.5 7.8 0.8 234 chr2R 12728823 intron CG42663 + chr2R 12728940 intron CG42663 + chr2R 12729057 intron CG42663 + chr2R_7_12725001 chr2R_12725001 RAL-900_125b 1154 chr2R 12777757 12777826 chr2R 12777912 12777985 19 157 0.0 8.5 4.2 3.7 228 chr2R 12777757 5` UTR CR45266 + chr2R 12777871 5` UTR CR45266 + chr2R 12777985 5` UTR CR45266 + chr2R_19_12775001 chr2R_12775001 RAL-900_125b 1155 chr2R 12789251 12789267 chr2R 12797664 12797676 roo 7 8411 19.0 6.0 12.5 0.5 8425 chr2R 12789251 intron,3` UTR sca +,CR45137 - chr2R 12793464 intron,intron sca +,CR45137 - chr2R 12797676 intron,3` UTR sca +,CR45137 - chr2R_7_12790001 chr2R_12790001 RAL-900_125b 1156 chr2R 12789268 12789328 chr2R 12797660 12797680 roo 23 8405 9.0 5.5 7.2 2.8 8412 chr2R 12789268 intron,3` UTR sca +,CR45137 - chr2R 12793474 intron,intron sca +,CR45137 - chr2R 12797680 intron,3` UTR sca +,CR45137 - chr2R_23_12790001 chr2R_12790001 RAL-900_125b 1157 chr2R 12798599 12798619 chr2R 12798893 12798918 8 298 13.5 14.5 14.0 0.5 319 chr2R 12798599 intron,3` UTR sca +,CR45137 - chr2R 12798758 intron,3` UTR sca +,CR45137 - chr2R 12798918 intron,3` UTR sca +,CR45137 - chr2R_8_12795001 chr2R_12795001 RAL-900_125b 1158 chr2R 12798621 12798635 chr2R 12798892 12798915 11 289 10.0 14.5 12.2 0.8 294 chr2R 12798621 intron,3` UTR sca +,CR45137 - chr2R 12798768 intron,3` UTR sca +,CR45137 - chr2R 12798915 intron,3` UTR sca +,CR45137 - chr2R_11_12795001 chr2R_12795001 RAL-900_125b 1159 chr2R 12815567 12815630 chr2R 12816337 12816400 24 769 6.5 7.5 7.0 3.0 833 chr2R 12815567 intergenic not near genes chr2R 12815984 intergenic not near genes chr2R 12816400 intergenic not near genes chr2R_24_12815001 chr2R_12815001 RAL-900_125b 1160 chr2R 12819111 12819174 chr2R 12819280 12819344 7 171 9.0 5.0 7.0 0.9 233 chr2R 12819111 intergenic not near genes chr2R 12819228 intergenic not near genes chr2R 12819344 intergenic not near genes chr2R_7_12815001 chr2R_12815001 RAL-900_125b 1161 chr2R 12819403 12819469 chr2R 12824522 12824588 jockey 27 5116 12.0 8.0 10.0 2.5 5185 chr2R 12819403 intergenic not near genes chr2R 12821996 intergenic not near genes chr2R 12824588 intergenic not near genes chr2R_27_12820001 chr2R_12820001 RAL-900_125b 1162 chr2R 12845363 12845436 chr2R 12845494 12845563 25 129 5.5 0.5 3.0 6.2 200 chr2R 12845363 intergenic CG17575 - chr2R 12845463 intergenic CG17575 - chr2R 12845563 3` UTR CG17575 - chr2R_25_12845001 chr2R_12845001 RAL-900_125b 1163 chr2R 12850461 12850465 chr2R 12857234 12857238 4 6773 1.5 0.0 0.8 2.2 6777 chr2R 12850461 intron CG17574 - chr2R 12853850 intron CG17574 - chr2R 12857238 intron CG17574 - chr2R_4_12850001 chr2R_12850001 RAL-900_125b 1164 chr2R 12897410 12897486 chr2R 12897551 12897627 18 138 8.5 2.5 5.5 2.8 217 chr2R 12897410 intron vg + chr2R 12897518 intron vg + chr2R 12897627 intron vg + chr2R_18_12895001 chr2R_12895001 RAL-900_125b 1165 chr2R 13004187 13004192 chr2R 13006969 13006979 5 2783 31.0 59.0 45.0 0.1 2792 chr2R 13004187 exon Su(z)2 + chr2R 13005583 intron Su(z)2 + chr2R 13006979 3` UTR Su(z)2 + chr2R_5_13005001 chr2R_13005001 RAL-900_125b 1166 chr2R 13004185 13004244 chr2R 13006993 13007043 21 2789 48.0 57.0 52.5 0.4 2858 chr2R 13004185 exon Su(z)2 + chr2R 13005614 intron Su(z)2 + chr2R 13007043 3` UTR Su(z)2 + chr2R_21_13005001 chr2R_13005001 RAL-900_125b 1167 chr2R 13027699 13027733 chr2R 13027828 13027862 15 127 13.5 6.5 10.0 1.4 163 chr2R 13027699 intergenic not near genes chr2R 13027780 intergenic not near genes chr2R 13027862 intergenic not near genes chr2R_15_13025001 chr2R_13025001 RAL-900_125b 1168 chr2R 13034619 13034688 chr2R 13034775 13034847 5 158 0.0 8.5 4.2 1.0 228 chr2R 13034619 intergenic not near genes chr2R 13034733 intergenic not near genes chr2R 13034847 intergenic not near genes chr2R_5_13030001 chr2R_13030001 RAL-900_125b 1169 chr2R 13041860 13041894 chr2R 13041991 13042026 6 132 5.0 4.0 4.5 1.1 166 chr2R 13041860 intergenic not near genes chr2R 13041943 intergenic not near genes chr2R 13042026 intergenic not near genes chr2R_6_13040001 chr2R_13040001 RAL-900_125b 1170 chr2R 13043016 13043063 chr2R 13043145 13043192 17 129 11.5 14.0 12.8 1.2 176 chr2R 13043016 intergenic not near genes chr2R 13043104 intergenic not near genes chr2R 13043192 intergenic not near genes chr2R_17_13040001 chr2R_13040001 RAL-900_125b 1171 chr2R 13054069 13054145 chr2R 13054533 13054608 44 461 7.0 4.5 5.8 6.5 539 chr2R 13054069 intergenic not near genes chr2R 13054338 intergenic not near genes chr2R 13054608 intergenic not near genes chr2R_44_13050001 chr2R_13050001 RAL-900_125b 1172 chr2R 13061298 13061377 chr2R 13061429 13061508 26 130 8.5 8.0 8.2 2.8 210 chr2R 13061298 intron Drl-2 - chr2R 13061403 intron Drl-2 - chr2R 13061508 intron Drl-2 - chr2R_26_13060001 chr2R_13060001 RAL-900_125b 1173 chr2R 13089703 13089780 chr2R 13089863 13089924 31 156 5.5 5.0 5.2 5.0 221 chr2R 13089703 intergenic not near genes chr2R 13089814 intergenic not near genes chr2R 13089924 intergenic not near genes chr2R_31_13085001 chr2R_13085001 RAL-900_125b 1174 chr2R 13094648 13094725 chr2R 13094797 13094874 28 149 7.5 12.0 9.8 2.6 226 chr2R 13094648 intergenic not near genes chr2R 13094761 intergenic not near genes chr2R 13094874 intergenic not near genes chr2R_28_13090001 chr2R_13090001 RAL-900_125b 1175 chr2R 13119944 13120021 chr2R 13120167 13120219 27 220 6.5 3.5 5.0 4.5 275 chr2R 13119944 intron CG13325 + chr2R 13120082 intron CG13325 + chr2R 13120219 intron CG13325 + chr2R_27_13120001 chr2R_13120001 RAL-900_125b 1176 chr2R 13136793 13136859 chr2R 13141641 13141707 Doc 32 4847 7.5 8.0 7.8 3.6 4914 chr2R 13136793 exon Cap-G + chr2R 13139250 intron Cap-G + chr2R 13141707 intron Cap-G + chr2R_32_13135001 chr2R_13135001 RAL-900_125b 1177 chr2R 13167389 13167461 chr2R 13167533 13167611 29 148 8.5 0.0 4.2 5.6 222 chr2R 13167389 intron GLaz - chr2R 13167500 intron GLaz - chr2R 13167611 intron GLaz - chr2R_29_13165001 chr2R_13165001 RAL-900_125b 1178 chr2R 13194830 13194853 chr2R 13194951 13194976 6 121 8.5 7.5 8.0 0.7 146 chr2R 13194830 intergenic not near genes chr2R 13194903 intergenic not near genes chr2R 13194976 intergenic not near genes chr2R_6_13190001 chr2R_13190001 RAL-900_125b 1179 chr2R 13220495 13220540 chr2R 13220623 13220689 12 131 1.0 7.5 4.2 2.3 194 chr2R 13220495 intron CG17059 + chr2R 13220592 intron CG17059 + chr2R 13220689 intron CG17059 + chr2R_12_13220001 chr2R_13220001 RAL-900_125b 1180 chr2R 13258510 13258580 chr2R 13259806 13259876 32 1294 10.0 8.0 9.0 3.2 1366 chr2R 13258510 intergenic CG10799 + chr2R 13259193 intergenic not near genes chr2R 13259876 intergenic CG42319 + chr2R_32_13255001 chr2R_13255001 RAL-900_125b 1181 chr2R 13276474 13276548 chr2R 13276639 13276713 35 164 11.5 9.0 10.2 3.1 239 chr2R 13276474 intron Dh31-R - chr2R 13276594 intron Dh31-R - chr2R 13276713 intron Dh31-R - chr2R_35_13275001 chr2R_13275001 RAL-900_125b 1182 chr2R 13290276 13290319 chr2R 13290451 13290515 7 191 0.0 9.0 4.5 1.3 239 chr2R 13290276 intron Dh31-R - chr2R 13290396 intron Dh31-R - chr2R 13290515 intron Dh31-R - chr2R_7_13290001 chr2R_13290001 RAL-900_125b 1183 chr2R 13372612 13372693 chr2R 13372743 13372823 13 129 4.5 5.0 4.8 2.2 211 chr2R 13372612 intergenic not near genes chr2R 13372718 intergenic not near genes chr2R 13372823 intergenic not near genes chr2R_13_13370001 chr2R_13370001 RAL-900_125b 1184 chr2R 13376605 13376636 chr2R 13376765 13376795 12 160 2.0 3.5 2.8 3.2 190 chr2R 13376605 intron CG10814 - chr2R 13376700 intron CG10814 - chr2R 13376795 exon CG10814 - chr2R_12_13375001 chr2R_13375001 RAL-900_125b 1185 chr2R 13403871 13403937 chr2R 13404006 13404072 35 135 7.5 0.0 3.8 7.3 201 chr2R 13403871 intergenic not near genes chr2R 13403972 intergenic not near genes chr2R 13404072 intergenic not near genes chr2R_35_13400001 chr2R_13400001 RAL-900_125b 1186 chr2R 13431444 13431519 chr2R 13431573 13431648 30 129 9.5 8.5 9.0 3.0 204 chr2R 13431444 intron CG42321 - chr2R 13431546 intron CG42321 - chr2R 13431648 intron CG42321 - chr2R_30_13430001 chr2R_13430001 RAL-900_125b 1187 chr2R 13438873 13438940 chr2R 13440141 13440208 19 1269 40.5 54.0 47.2 0.4 1335 chr2R 13438873 5` UTR CG42321 - chr2R 13439540 3` UTR cnn - chr2R 13440208 exon cnn - chr2R_19_13435001 chr2R_13435001 RAL-900_125b 1188 chr2R 13554685 13554774 chr2R 13554827 13554881 8 133 0.0 8.0 4.0 1.6 196 chr2R 13554685 intron Roe1 + chr2R 13554783 intron Roe1 + chr2R 13554881 intron Roe1 + chr2R_8_13550001 chr2R_13550001 RAL-900_125b 1189 chr2R 13566217 13566249 chr2R 13566347 13566379 14 130 11.5 0.0 5.8 2.1 162 chr2R 13566217 intergenic not near genes chr2R 13566298 intergenic not near genes chr2R 13566379 intergenic not near genes chr2R_14_13565001 chr2R_13565001 RAL-900_125b 1190 chr2R 13568162 13568227 chr2R 13568317 13568355 17 153 0.5 10.5 5.5 2.6 193 chr2R 13568162 intergenic not near genes chr2R 13568258 intergenic not near genes chr2R 13568355 intergenic not near genes chr2R_17_13565001 chr2R_13565001 RAL-900_125b 1191 chr2R 13578344 13578405 chr2R 13578485 13578545 19 140 4.5 6.0 5.2 3.1 201 chr2R 13578344 5` UTR CR44366 + chr2R 13578444 5` UTR CR44366 + chr2R 13578545 5` UTR CR44366 + chr2R_19_13575001 chr2R_13575001 RAL-900_125b 1192 chr2R 13580482 13580527 chr2R 13580869 13580896 jockey 22 396 1.5 3.5 2.5 6.3 414 chr2R 13580482 3` UTR CG6191 - chr2R 13580689 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580896 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_22_13580001 chr2R_13580001 RAL-900_125b 1193 chr2R 13608255 13608298 chr2R 13608357 13608422 20 125 8.0 8.5 8.2 2.2 167 chr2R 13608255 intergenic CG12464 - chr2R 13608338 intergenic CG12464 - chr2R 13608422 intergenic CG12464 - chr2R_20_13605001 chr2R_13605001 RAL-900_125b 1194 chr2R 13622167 13622184 chr2R 13622298 13622315 7 131 0.0 19.0 9.5 0.7 148 chr2R 13622167 intergenic not near genes chr2R 13622241 intergenic not near genes chr2R 13622315 intergenic not near genes chr2R_7_13620001 chr2R_13620001 RAL-900_125b 1195 chr2R 13635692 13635704 chr2R 13635840 13635853 6 149 0.0 12.5 6.2 0.8 161 chr2R 13635692 intron fas + chr2R 13635772 intron fas + chr2R 13635853 intron fas + chr2R_6_13635001 chr2R_13635001 RAL-900_125b 1196 chr2R 13652659 13652737 chr2R 13652788 13652866 33 127 6.5 8.5 7.5 3.9 207 chr2R 13652659 intron fas + chr2R 13652762 intron fas + chr2R 13652866 intron fas + chr2R_33_13650001 chr2R_13650001 RAL-900_125b 1197 chr2R 13658039 13658107 chr2R 13658169 13658237 21 119 9.5 6.0 7.8 2.4 198 chr2R 13658039 intron fas + chr2R 13658138 intron fas + chr2R 13658237 intron fas + chr2R_21_13655001 chr2R_13655001 RAL-900_125b 1198 chr2R 13663565 13663633 chr2R 13663689 13663753 26 125 10.5 7.5 9.0 2.6 188 chr2R 13663565 intron,5` UTR fas +,CG6209 - chr2R 13663659 intron fas + chr2R 13663753 intron fas + chr2R_26_13660001 chr2R_13660001 RAL-900_125b 1199 chr2R 13709563 13709833 chr2R 13709690 13709975 21 133 16.0 4.5 10.2 1.9 412 chr2R 13709563 intron fas + chr2R 13709769 intron fas + chr2R 13709975 intron fas + chr2R_21_13705001 chr2R_13705001 RAL-900_125b 1200 chr2R 13710190 13710219 chr2R 13710311 13710346 11 124 0.0 0.5 0.2 9.2 156 chr2R 13710190 intron fas + chr2R 13710268 intron fas + chr2R 13710346 intron fas + chr2R_11_13710001 chr2R_13710001 RAL-900_125b 1201 chr2R 13718596 13718621 chr2R 13718743 13718768 10 147 5.5 8.5 7.0 1.2 172 chr2R 13718596 intron fas + chr2R 13718682 intron fas + chr2R 13718768 intron fas + chr2R_10_13715001 chr2R_13715001 RAL-900_125b 1202 chr2R 13726260 13726264 chr2R 13726439 13726446 5 181 6.5 6.0 6.2 0.7 186 chr2R 13726260 exon fas + chr2R 13726353 intron fas + chr2R 13726446 intron fas + chr2R_5_13725001 chr2R_13725001 RAL-900_125b 1203 chr2R 13727817 13727841 chr2R 13727941 13727977 9 134 12.0 19.5 15.8 0.5 160 chr2R 13727817 intron fas + chr2R 13727897 intron fas + chr2R 13727977 intron fas + chr2R_9_13725001 chr2R_13725001 RAL-900_125b 1204 chr2R 13728096 13728155 chr2R 13735803 13735862 opus 23 7707 5.5 7.5 6.5 3.1 7766 chr2R 13728096 intron fas + chr2R 13731979 intron fas + chr2R 13735862 intron fas + chr2R_23_13730001 chr2R_13730001 RAL-900_125b 1205 chr2R 13764460 13764478 chr2R 13764640 13764658 17 180 8.5 0.0 4.2 3.3 198 chr2R 13764460 intergenic not near genes chr2R 13764559 intergenic not near genes chr2R 13764658 intergenic not near genes chr2R_17_13760001 chr2R_13760001 RAL-900_125b 1206 chr2R 13768940 13768998 chr2R 13769089 13769143 19 148 12.0 10.0 11.0 1.6 203 chr2R 13768940 intergenic not near genes chr2R 13769042 intergenic not near genes chr2R 13769143 intergenic not near genes chr2R_19_13765001 chr2R_13765001 RAL-900_125b 1207 chr2R 13790276 13790293 chr2R 13790402 13790419 12 126 20.0 1.5 10.8 1.0 143 chr2R 13790276 intergenic not near genes chr2R 13790348 intergenic not near genes chr2R 13790419 intergenic not near genes chr2R_12_13790001 chr2R_13790001 RAL-900_125b 1208 chr2R 13817640 13817693 chr2R 13817771 13817824 23 128 6.0 7.0 6.5 3.1 184 chr2R 13817640 intron stj + chr2R 13817732 intron stj + chr2R 13817824 intron stj + chr2R_23_13815001 chr2R_13815001 RAL-900_125b 1209 chr2R 13861391 13861457 chr2R 13861521 13861587 20 130 5.5 10.0 7.8 2.3 196 chr2R 13861391 intron CG16935 - chr2R 13861489 intron CG16935 - chr2R 13861587 intron CG16935 - chr2R_20_13860001 chr2R_13860001 RAL-900_125b 1210 chr2R 13868851 13868919 chr2R 13868980 13869048 18 129 7.0 10.5 8.8 1.8 197 chr2R 13868851 intron shot - chr2R 13868950 intron shot - chr2R 13869048 intron shot - chr2R_18_13865001 chr2R_13865001 RAL-900_125b 1211 chr2R 13905571 13905621 chr2R 13907598 13907652 Rt1a 19 2028 9.5 12.0 10.8 1.6 2081 chr2R 13905571 intron shot - chr2R 13906612 intron shot - chr2R 13907652 intron shot - chr2R_19_13905001 chr2R_13905001 RAL-900_125b 1212 chr2R 13924424 13924444 chr2R 13924591 13924611 15 167 20.5 3.5 12.0 1.2 187 chr2R 13924424 intron shot - chr2R 13924518 intron shot - chr2R 13924611 intron shot - chr2R_15_13920001 chr2R_13920001 RAL-900_125b 1213 chr2R 13925825 13925885 chr2R 13926029 13926089 23 203 8.5 5.0 6.8 2.9 264 chr2R 13925825 intron shot - chr2R 13925957 intron shot - chr2R 13926089 intron shot - chr2R_23_13925001 chr2R_13925001 RAL-900_125b 1214 chr2R 13933385 13933439 chr2R 13933517 13933550 21 130 11.5 4.0 7.8 2.4 165 chr2R 13933385 intron shot - chr2R 13933468 intron shot - chr2R 13933550 intron shot - chr2R_21_13930001 chr2R_13930001 RAL-900_125b 1215 chr2R 14000188 14000251 chr2R 14000466 14000529 45 278 8.0 7.5 7.8 5.1 341 chr2R 14000188 intron mam + chr2R 14000358 intron mam + chr2R 14000529 intron mam + chr2R_45_14000001 chr2R_14000001 RAL-900_125b 1216 chr2R 14037230 14037286 chr2R 14037363 14037419 11 133 6.5 11.5 9.0 1.1 189 chr2R 14037230 intron mam + chr2R 14037324 intron mam + chr2R 14037419 intron mam + chr2R_11_14035001 chr2R_14035001 RAL-900_125b 1217 chr2R 14141913 14141937 chr2R 14142068 14142092 8 155 25.0 20.5 22.8 0.3 179 chr2R 14141913 intergenic not near genes chr2R 14142002 intergenic not near genes chr2R 14142092 intergenic not near genes chr2R_8_14140001 chr2R_14140001 RAL-900_125b 1218 chr2R 14168319 14168392 chr2R 14168458 14168531 37 139 9.5 10.0 9.8 3.4 212 chr2R 14168319 intergenic CG18327 +,CG18324 + chr2R 14168425 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168531 intergenic CG18324 +,CG18327 +,CR44368 - chr2R_37_14165001 chr2R_14165001 RAL-900_125b 1219 chr2R 14285025 14285048 chr2R 14285158 14285181 8 133 0.0 11.0 5.5 1.2 156 chr2R 14285025 intron Ih + chr2R 14285103 intron Ih + chr2R 14285181 intron Ih + chr2R_8_14285001 chr2R_14285001 RAL-900_125b 1220 chr2R 14310797 14310866 chr2R 14310922 14310987 10 115 9.5 9.5 9.5 1.0 190 chr2R 14310797 intron Shroom + chr2R 14310892 intron Shroom + chr2R 14310987 intron Shroom + chr2R_10_14310001 chr2R_14310001 RAL-900_125b 1221 chr2R 14357505 14357577 chr2R 14357645 14357717 29 138 10.5 7.5 9.0 2.9 212 chr2R 14357505 intergenic CG8617 -,Arc1 - chr2R 14357611 intergenic Arc1 -,CG8617 - chr2R 14357717 intergenic Arc1 -,CG8617 - chr2R_29_14355001 chr2R_14355001 RAL-900_125b 1222 chr2R 14393818 14393889 chr2R 14393953 14394014 19 131 10.5 8.0 9.2 1.9 196 chr2R 14393818 intergenic not near genes chr2R 14393916 intergenic not near genes chr2R 14394014 intergenic not near genes chr2R_19_14390001 chr2R_14390001 RAL-900_125b 1223 chr2R 14400316 14400327 chr2R 14400464 14400475 5 147 19.5 16.5 18.0 0.3 159 chr2R 14400316 intergenic not near genes chr2R 14400396 intergenic not near genes chr2R 14400475 intergenic not near genes chr2R_5_14400001 chr2R_14400001 RAL-900_125b 1224 chr2R 14400328 14400375 chr2R 14400458 14400517 20 147 9.0 14.5 11.8 1.6 189 chr2R 14400328 intergenic not near genes chr2R 14400422 intergenic not near genes chr2R 14400517 intergenic not near genes chr2R_20_14400001 chr2R_14400001 RAL-900_125b 1225 chr2R 14457440 14457450 chr2R 14457566 14457576 6 125 0.0 6.0 3.0 1.5 136 chr2R 14457440 intron Oaz + chr2R 14457508 intron Oaz + chr2R 14457576 intron Oaz + chr2R_6_14455001 chr2R_14455001 RAL-900_125b 1226 chr2R 14467256 14467327 chr2R 14476464 14476535 roo 26 9207 3.5 14.0 8.8 2.7 9279 chr2R 14467256 intergenic not near genes chr2R 14471896 intergenic not near genes chr2R 14476535 5` UTR CR44462 + chr2R_26_14470001 chr2R_14470001 RAL-900_125b 1227 chr2R 14497338 14497387 chr2R 14498551 14498600 1360 23 1213 6.0 8.5 7.2 2.8 1262 chr2R 14497338 intergenic Cpsf160 -,L + chr2R 14497969 intron Cpsf160 - chr2R 14498600 3` UTR Cpsf160 - chr2R_23_14495001 chr2R_14495001 RAL-900_125b 1228 chr2R 14514433 14514500 chr2R 14514579 14514642 16 144 9.5 11.0 10.2 1.4 209 chr2R 14514433 intron,exon Cpr51A -,CG30197 + chr2R 14514538 intron,intron Cpr51A -,CG30197 + chr2R 14514642 intron,intron Cpr51A -,CG30197 + chr2R_16_14510001 chr2R_14510001 RAL-900_125b 1229 chr2R 14525350 14525420 chr2R 14525653 14525723 20 301 9.0 11.5 10.2 1.8 373 chr2R 14525350 intergenic not near genes chr2R 14525536 intergenic not near genes chr2R 14525723 intergenic not near genes chr2R_20_14525001 chr2R_14525001 RAL-900_125b 1230 chr2R 14530325 14530336 chr2R 14530464 14530475 7 139 23.0 8.0 15.5 0.4 150 chr2R 14530325 intron ttv + chr2R 14530400 intron ttv + chr2R 14530475 intron ttv + chr2R_7_14530001 chr2R_14530001 RAL-900_125b 1231 chr2R 14530339 14530373 chr2R 14530452 14530512 22 136 13.0 6.0 9.5 2.1 173 chr2R 14530339 intron ttv + chr2R 14530426 intron ttv + chr2R 14530512 intron ttv + chr2R_22_14530001 chr2R_14530001 RAL-900_125b 1232 chr2R 14533729 14533786 chr2R 14533861 14533919 11 133 4.5 3.5 4.0 2.2 190 chr2R 14533729 intron ttv + chr2R 14533824 intron ttv + chr2R 14533919 intron ttv + chr2R_11_14530001 chr2R_14530001 RAL-900_125b 1233 chr2R 14538910 14538983 chr2R 14539036 14539076 19 112 11.5 11.0 11.2 1.6 166 chr2R 14538910 intron ttv + chr2R 14538993 intron ttv + chr2R 14539076 intron ttv + chr2R_19_14535001 chr2R_14535001 RAL-900_125b 1234 chr2R 14550469 14550553 chr2R 14550611 14550657 17 126 0.0 9.5 4.8 2.9 188 chr2R 14550469 intron ttv + chr2R 14550563 intron ttv + chr2R 14550657 intron ttv + chr2R_17_14550001 chr2R_14550001 RAL-900_125b 1235 chr2R 14623818 14623900 chr2R 14623964 14624046 16 146 7.5 7.0 7.2 2.0 228 chr2R 14623818 intron,5` UTR Uhg5 +,snoRNA:Me28S-G2703b + chr2R 14623932 5` UTR Uhg5 + chr2R 14624046 intron,5` UTR Uhg5 +,snoRNA:Me28S-G2703c + chr2R_16_14620001 chr2R_14620001 RAL-900_125b 1236 chr2R 14634233 14634309 chr2R 14634371 14634447 30 136 7.0 7.5 7.2 3.7 214 chr2R 14634233 intergenic not near genes chr2R 14634340 intergenic not near genes chr2R 14634447 intergenic not near genes chr2R_30_14630001 chr2R_14630001 RAL-900_125b 1237 chr2R 14707092 14707154 chr2R 14707785 14707847 33 692 7.0 5.5 6.2 4.6 755 chr2R 14707092 intron mspo - chr2R 14707470 intron mspo - chr2R 14707847 intron mspo - chr2R_33_14705001 chr2R_14705001 RAL-900_125b 1238 chr2R 14722261 14722291 chr2R 14722415 14722444 12 152 16.0 1.0 8.5 1.3 183 chr2R 14722261 intergenic not near genes chr2R 14722352 intergenic not near genes chr2R 14722444 intergenic not near genes chr2R_12_14720001 chr2R_14720001 RAL-900_125b 1239 chr2R 14790581 14790654 chr2R 14790784 14790832 15 199 6.0 9.0 7.5 1.8 251 chr2R 14790581 intron kn - chr2R 14790706 intron kn - chr2R 14790832 intron kn - chr2R_15_14790001 chr2R_14790001 RAL-900_125b 1240 chr2R 14796288 14796359 chr2R 14796435 14796506 41 147 5.5 8.5 7.0 5.1 218 chr2R 14796288 intron kn - chr2R 14796397 intron kn - chr2R 14796506 intron kn - chr2R_41_14795001 chr2R_14795001 RAL-900_125b 1241 chr2R 14803427 14803506 chr2R 14803557 14803636 17 130 1.5 6.0 3.8 3.5 209 chr2R 14803427 intron kn - chr2R 14803532 intron kn - chr2R 14803636 intron kn - chr2R_17_14800001 chr2R_14800001 RAL-900_125b 1242 chr2R 14826348 14826386 chr2R 14826502 14826540 18 154 4.5 3.5 4.0 3.6 192 chr2R 14826348 intergenic not near genes chr2R 14826444 intergenic not near genes chr2R 14826540 intergenic not near genes chr2R_18_14825001 chr2R_14825001 RAL-900_125b 1243 chr2R 14842342 14842395 chr2R 14842488 14842541 26 145 9.0 4.0 6.5 3.5 199 chr2R 14842342 intergenic NaPi-T - chr2R 14842442 intergenic NaPi-T - chr2R 14842541 intergenic NaPi-T - chr2R_26_14840001 chr2R_14840001 RAL-900_125b 1244 chr2R 14889169 14889241 chr2R 14897827 14897891 Max-element 25 8653 11.0 0.0 5.5 3.8 8722 chr2R 14889169 intergenic Cyp6a8 - chr2R 14893530 intergenic not near genes chr2R 14897891 intergenic not near genes chr2R_25_14890001 chr2R_14890001 RAL-900_125b 1245 chr2R 14911651 14911725 chr2R 14911824 14911898 34 173 12.0 9.5 10.8 2.9 247 chr2R 14911651 intron CG10249 - chr2R 14911774 intron CG10249 - chr2R 14911898 intron CG10249 - chr2R_34_14910001 chr2R_14910001 RAL-900_125b 1246 chr2R 14916512 14916557 chr2R 14916642 14916687 20 130 12.0 3.5 7.8 2.3 175 chr2R 14916512 intron CG10249 - chr2R 14916600 intron CG10249 - chr2R 14916687 intron CG10249 - chr2R_20_14915001 chr2R_14915001 RAL-900_125b 1247 chr2R 14917808 14917877 chr2R 14917943 14918012 39 134 8.5 5.5 7.0 4.9 204 chr2R 14917808 intron CG10249 - chr2R 14917910 intron CG10249 - chr2R 14918012 intron CG10249 - chr2R_39_14915001 chr2R_14915001 RAL-900_125b 1248 chr2R 14919138 14919148 chr2R 14919297 14919307 7 159 12.5 0.0 6.2 1.0 169 chr2R 14919138 intron CG10249 - chr2R 14919222 intron CG10249 - chr2R 14919307 intron CG10249 - chr2R_7_14915001 chr2R_14915001 RAL-900_125b 1249 chr2R 14922099 14922152 chr2R 14922225 14922232 19 124 16.0 11.0 13.5 1.3 133 chr2R 14922099 intron CG10249 - chr2R 14922166 intron CG10249 - chr2R 14922232 intron CG10249 - chr2R_19_14920001 chr2R_14920001 RAL-900_125b 1250 chr2R 14930805 14930859 chr2R 14930948 14931001 20 143 0.0 2.0 1.0 10.0 196 chr2R 14930805 intron CG10253 - chr2R 14930903 intron CG10253 - chr2R 14931001 intron CG10253 - chr2R_20_14930001 chr2R_14930001 RAL-900_125b 1251 chr2R 14934466 14934483 chr2R 14934608 14934625 5 142 4.5 7.0 5.8 0.7 159 chr2R 14934466 intron CG10253 - chr2R 14934546 intron CG10253 - chr2R 14934625 intron CG10253 - chr2R_5_14930001 chr2R_14930001 RAL-900_125b 1252 chr2R 14954700 14954781 chr2R 14954826 14954907 20 126 7.5 5.5 6.5 2.7 207 chr2R 14954700 intron aPKC - chr2R 14954804 intron aPKC - chr2R 14954907 intron aPKC - chr2R_20_14950001 chr2R_14950001 RAL-900_125b 1253 chr2R 14968016 14968083 chr2R 14968143 14968202 29 128 0.5 6.5 3.5 6.4 186 chr2R 14968016 intron ckn + chr2R 14968109 intron ckn + chr2R 14968202 intron ckn + chr2R_29_14965001 chr2R_14965001 RAL-900_125b 1254 chr2R 15004685 15004745 chr2R 15005064 15005124 jockey 25 379 10.0 11.0 10.5 2.2 439 chr2R 15004685 intergenic not near genes chr2R 15004904 intergenic not near genes chr2R 15005124 intergenic not near genes chr2R_25_15000001 chr2R_15000001 RAL-900_125b 1255 chr2R 15015414 15015436 chr2R 15022888 15022910 mdg1 10 7473 12.5 1.0 6.8 1.3 7496 chr2R 15015414 intron hbs + chr2R 15019162 intron hbs + chr2R 15022910 intron hbs + chr2R_10_15015001 chr2R_15015001 RAL-900_125b 1256 chr2R 15015437 15015470 chr2R 15022881 15022944 mdg1 17 7469 8.0 1.0 4.5 3.1 7507 chr2R 15015437 intron hbs + chr2R 15019190 intron hbs + chr2R 15022944 intron hbs + chr2R_17_15015001 chr2R_15015001 RAL-900_125b 1257 chr2R 15033434 15033497 chr2R 15033561 15033624 24 125 15.5 7.0 11.2 2.0 190 chr2R 15033434 intron hbs + chr2R 15033529 intron hbs + chr2R 15033624 intron hbs + chr2R_24_15030001 chr2R_15030001 RAL-900_125b 1258 chr2R 15065601 15065643 chr2R 15065694 15065771 16 112 6.5 8.0 7.2 2.0 170 chr2R 15065601 intergenic not near genes chr2R 15065686 intergenic not near genes chr2R 15065771 intergenic not near genes chr2R_16_15065001 chr2R_15065001 RAL-900_125b 1259 chr2R 15074755 15074823 chr2R 15075066 15075134 27 307 10.5 9.0 9.8 2.5 379 chr2R 15074755 intergenic not near genes chr2R 15074944 intergenic not near genes chr2R 15075134 intergenic not near genes chr2R_27_15070001 chr2R_15070001 RAL-900_125b 1260 chr2R 15084940 15085004 chr2R 15092039 15092102 297 16 7098 7.5 10.0 8.8 1.6 7162 chr2R 15084940 intergenic not near genes chr2R 15088521 intergenic not near genes chr2R 15092102 5` UTR CR44457 + chr2R_16_15085001 chr2R_15085001 RAL-900_125b 1261 chr2R 15092360 15092430 chr2R 15092499 15092570 32 140 11.5 10.5 11.0 2.7 210 chr2R 15092360 5` UTR CR44457 + chr2R 15092465 intergenic CR44457 + chr2R 15092570 intergenic CR44457 + chr2R_32_15090001 chr2R_15090001 RAL-900_125b 1262 chr2R 15119280 15119343 chr2R 15127811 15127851 Tirant 25 8528 12.5 12.5 12.5 1.9 8571 chr2R 15119280 intron chn + chr2R 15123566 intron chn + chr2R 15127851 intron chn + chr2R_25_15120001 chr2R_15120001 RAL-900_125b 1263 chr2R 15296114 15296122 chr2R 15296247 15296255 6 133 12.5 8.0 10.2 0.5 141 chr2R 15296114 intron Trpm - chr2R 15296184 intron Trpm - chr2R 15296255 intron Trpm - chr2R_6_15295001 chr2R_15295001 RAL-900_125b 1264 chr2R 15296123 15296168 chr2R 15296245 15296299 25 132 4.0 7.0 5.5 3.8 176 chr2R 15296123 intron Trpm - chr2R 15296211 intron Trpm - chr2R 15296299 intron Trpm - chr2R_25_15295001 chr2R_15295001 RAL-900_125b 1265 chr2R 15340647 15340665 chr2R 15349280 15349298 Tirant 7 8633 17.0 8.0 12.5 0.5 8651 chr2R 15340647 intron unc-5 + chr2R 15344972 intron unc-5 + chr2R 15349298 intron unc-5 + chr2R_7_15340001 chr2R_15340001 RAL-900_125b 1266 chr2R 15501919 15501996 chr2R 15502087 15502164 36 168 5.0 8.0 6.5 4.8 245 chr2R 15501919 exon Ir52b + chr2R 15502042 exon Ir52b + chr2R 15502164 exon Ir52b + chr2R_36_15500001 chr2R_15500001 RAL-900_125b 1267 chr2R 15606082 15606123 chr2R 15606209 15606250 24 127 18.0 7.5 12.8 1.7 168 chr2R 15606082 intergenic not near genes chr2R 15606166 intergenic not near genes chr2R 15606250 intergenic not near genes chr2R_24_15605001 chr2R_15605001 RAL-900_125b 1268 chr2R 15624697 15624705 chr2R 15624843 15624851 6 146 0.0 10.5 5.2 1.0 154 chr2R 15624697 intron CG42524 + chr2R 15624774 intron CG42524 + chr2R 15624851 intron CG42524 + chr2R_6_15620001 chr2R_15620001 RAL-900_125b 1269 chr2R 15655982 15656064 chr2R 15656123 15656205 17 141 0.0 5.0 2.5 4.9 223 chr2R 15655982 intron CG42524 + chr2R 15656094 intron CG42524 + chr2R 15656205 intron CG42524 + chr2R_17_15655001 chr2R_15655001 RAL-900_125b 1270 chr2R 15702925 15702971 chr2R 15703052 15703098 14 127 12.5 10.0 11.2 1.1 173 chr2R 15702925 intergenic not near genes chr2R 15703012 intergenic not near genes chr2R 15703098 intergenic not near genes chr2R_14_15700001 chr2R_15700001 RAL-900_125b 1271 chr2R 15794804 15794898 chr2R 15794958 15795038 17 143 0.0 0.0 0.0 17.0 234 chr2R 15794804 intron,5` UTR Zasp52 -,tun + chr2R 15794921 intron,5` UTR Zasp52 -,tun + chr2R 15795038 intron,intron Zasp52 -,tun + chr2R_17_15790001 chr2R_15790001 RAL-900_125b 1272 chr2R 15828112 15828126 chr2R 15828322 15828336 9 209 5.5 8.5 7.0 1.1 224 chr2R 15828112 intron,intron tun +,Poxn - chr2R 15828224 intron,intron tun +,Poxn - chr2R 15828336 intron,intron tun +,Poxn - chr2R_9_15825001 chr2R_15825001 RAL-900_125b 1273 chr2R 15828129 15828156 chr2R 15828315 15828366 13 206 0.5 6.5 3.5 2.9 237 chr2R 15828129 intron,intron tun +,Poxn - chr2R 15828248 intron,intron tun +,Poxn - chr2R 15828366 intron,intron tun +,Poxn - chr2R_13_15825001 chr2R_15825001 RAL-900_125b 1274 chr2R 15891769 15891835 chr2R 15891895 15891961 27 126 9.5 6.5 8.0 3.0 192 chr2R 15891769 intron sli - chr2R 15891865 intron sli - chr2R 15891961 intron sli - chr2R_27_15890001 chr2R_15890001 RAL-900_125b 1275 chr2R 15898837 15898906 chr2R 15898985 15899054 32 148 9.0 9.5 9.2 3.1 217 chr2R 15898837 intron sli - chr2R 15898946 intron sli - chr2R 15899054 intron sli - chr2R_32_15895001 chr2R_15895001 RAL-900_125b 1276 chr2R 16054918 16054958 chr2R 16055036 16055072 10 124 9.5 13.0 11.2 0.8 154 chr2R 16054918 intron CG8405 + chr2R 16054995 intron CG8405 + chr2R 16055072 intron CG8405 + chr2R_10_16050001 chr2R_16050001 RAL-900_125b 1277 chr2R 16061673 16061717 chr2R 16064359 16064402 Burdock 13 2685 13.5 8.5 11.0 1.1 2729 chr2R 16061673 intergenic not near genes chr2R 16063038 intergenic not near genes chr2R 16064402 intergenic not near genes chr2R_13_16060001 chr2R_16060001 RAL-900_125b 1278 chr2R 16245583 16245652 chr2R 16245720 16245790 29 138 12.0 6.5 9.2 2.8 207 chr2R 16245583 intron CngA - chr2R 16245686 intron CngA - chr2R 16245790 intron CngA - chr2R_29_16245001 chr2R_16245001 RAL-900_125b 1279 chr2R 16279355 16279400 chr2R 16279490 16279535 7 135 0.0 14.0 7.0 0.9 180 chr2R 16279355 intergenic not near genes chr2R 16279445 intergenic not near genes chr2R 16279535 intergenic CG15704 + chr2R_7_16275001 chr2R_16275001 RAL-900_125b 1280 chr2R 16344055 16344134 chr2R 16344193 16344272 43 137 10.5 6.0 8.2 4.7 217 chr2R 16344055 5` UTR CG7997 - chr2R 16344164 5` UTR CG7997 - chr2R 16344272 intergenic CG7997 -,Nup62 + chr2R_43_16340001 chr2R_16340001 RAL-900_125b 1281 chr2R 16352821 16352867 chr2R 16352954 16353000 14 132 10.5 0.0 5.2 2.3 179 chr2R 16352821 intergenic not near genes chr2R 16352910 intergenic not near genes chr2R 16353000 intergenic not near genes chr2R_14_16350001 chr2R_16350001 RAL-900_125b 1282 chr2R 16402971 16402987 chr2R 16403110 16403114 7 134 13.5 10.5 12.0 0.5 143 chr2R 16402971 intron Sema-2b + chr2R 16403042 intron Sema-2b + chr2R 16403114 intron Sema-2b + chr2R_7_16400001 chr2R_16400001 RAL-900_125b 1283 chr2R 16457973 16457985 chr2R 16458103 16458115 4 130 16.0 0.0 8.0 0.4 142 chr2R 16457973 intergenic not near genes chr2R 16458044 intergenic not near genes chr2R 16458115 intergenic not near genes chr2R_4_16455001 chr2R_16455001 RAL-900_125b 1284 chr2R 16517995 16518072 chr2R 16518121 16518198 39 126 11.0 7.0 9.0 3.9 203 chr2R 16517995 intron Sema-2a + chr2R 16518096 intron Sema-2a + chr2R 16518198 intron Sema-2a + chr2R_39_16515001 chr2R_16515001 RAL-900_125b 1285 chr2R 16539601 16539660 chr2R 16544858 16544949 copia 13 5274 6.5 0.0 3.2 3.1 5348 chr2R 16539601 intergenic not near genes chr2R 16542275 intergenic not near genes chr2R 16544949 intergenic not near genes chr2R_13_16540001 chr2R_16540001 RAL-900_125b 1286 chr2R 16544858 16544872 chr2R 16544993 16545007 4 135 0.0 2.0 1.0 2.0 149 chr2R 16544858 intergenic not near genes chr2R 16544932 intergenic not near genes chr2R 16545007 intergenic not near genes chr2R_4_16540001 chr2R_16540001 RAL-900_125b 1287 chr2R 16571827 16571901 chr2R 16571972 16572046 30 145 8.0 12.0 10.0 2.7 219 chr2R 16571827 intergenic CG4927 + chr2R 16571936 intergenic CG4927 + chr2R 16572046 intergenic CG4927 + chr2R_30_16570001 chr2R_16570001 RAL-900_125b 1288 chr2R 16603435 16603484 chr2R 16607389 16607438 21 3955 68.0 66.0 67.0 0.3 4003 chr2R 16603435 intron CG8303 - chr2R 16605436 intergenic not near genes chr2R 16607438 intergenic CG5065 + chr2R_21_16605001 chr2R_16605001 RAL-900_125b 1289 chr2R 16713058 16713066 chr2R 16713192 16713200 5 134 0.0 23.5 11.8 0.4 142 chr2R 16713058 intron CG30463 - chr2R 16713129 intron CG30463 - chr2R 16713200 intron CG30463 - chr2R_5_16710001 chr2R_16710001 RAL-900_125b 1290 chr2R 16726625 16726679 chr2R 16726774 16726828 20 149 8.0 10.0 9.0 2.0 203 chr2R 16726625 intron CG30463 - chr2R 16726726 intron CG30463 - chr2R 16726828 intron CG30463 - chr2R_20_16725001 chr2R_16725001 RAL-900_125b 1291 chr2R 16775616 16775672 chr2R 16775933 16775989 24 317 4.5 15.5 10.0 2.2 373 chr2R 16775616 3` UTR Arp53D + chr2R 16775802 intergenic Arp53D + chr2R 16775989 intergenic Arp53D + chr2R_24_16775001 chr2R_16775001 RAL-900_125b 1292 chr2R 16807996 16808053 chr2R 16808129 16808207 17 152 8.5 10.5 9.5 1.6 211 chr2R 16807996 intergenic not near genes chr2R 16808102 intergenic not near genes chr2R 16808207 intergenic not near genes chr2R_17_16805001 chr2R_16805001 RAL-900_125b 1293 chr2R 16828223 16828241 chr2R 16828375 16828378 8 149 13.5 0.0 6.8 1.0 155 chr2R 16828223 intergenic CG34460 + chr2R 16828300 intergenic not near genes chr2R 16828378 intergenic not near genes chr2R_8_16825001 chr2R_16825001 RAL-900_125b 1294 chr2R 16828242 16828298 chr2R 16828374 16828445 13 147 8.0 0.0 4.0 2.6 203 chr2R 16828242 intergenic CG34460 + chr2R 16828344 intergenic not near genes chr2R 16828445 intergenic not near genes chr2R_13_16825001 chr2R_16825001 RAL-900_125b 1295 chr2R 16892273 16892314 chr2R 16892415 16892456 7 142 7.5 7.5 7.5 0.8 183 chr2R 16892273 intron CG8910 - chr2R 16892364 intron CG8910 - chr2R 16892456 intron CG8910 - chr2R_7_16890001 chr2R_16890001 RAL-900_125b 1296 chr2R 16930608 16930626 chr2R 16930731 16930754 9 127 0.0 19.0 9.5 0.9 146 chr2R 16930608 intron Pkc53E + chr2R 16930681 intron Pkc53E + chr2R 16930754 intron Pkc53E + chr2R_9_16930001 chr2R_16930001 RAL-900_125b 1297 chr2R 16938028 16938044 chr2R 16938331 16938336 6 301 12.0 0.5 6.2 0.8 308 chr2R 16938028 intron Pkc53E + chr2R 16938182 intron Pkc53E + chr2R 16938336 intron Pkc53E + chr2R_6_16935001 chr2R_16935001 RAL-900_125b 1298 chr2R 16970772 16970837 chr2R 16970899 16970965 16 125 3.0 11.5 7.2 2.0 193 chr2R 16970772 5` UTR CR44377 + chr2R 16970868 5` UTR CR44377 + chr2R 16970965 5` UTR CR44377 + chr2R_16_16970001 chr2R_16970001 RAL-900_125b 1299 chr2R 16972143 16972163 chr2R 16972272 16972291 6 129 23.0 0.0 11.5 0.5 148 chr2R 16972143 intergenic CR44377 + chr2R 16972217 intergenic not near genes chr2R 16972291 intergenic not near genes chr2R_6_16970001 chr2R_16970001 RAL-900_125b 1300 chr2R 16981934 16982096 chr2R 16982097 16982224 24 169 0.0 0.0 0.0 24.0 290 chr2R 16981934 intron Cbp53E + chr2R 16982079 intron Cbp53E + chr2R 16982224 intron Cbp53E + chr2R_24_16980001 chr2R_16980001 RAL-900_125b 1301 chr2R 16986998 16987071 chr2R 16987169 16987242 29 171 11.5 8.5 10.0 2.6 244 chr2R 16986998 intron Cbp53E + chr2R 16987120 intron Cbp53E + chr2R 16987242 intron Cbp53E + chr2R_29_16985001 chr2R_16985001 RAL-900_125b 1302 chr2R 16993051 16993108 chr2R 16993180 16993237 16 129 13.0 0.5 6.8 2.1 186 chr2R 16993051 intron Cbp53E + chr2R 16993144 intron Cbp53E + chr2R 16993237 intron Cbp53E + chr2R_16_16990001 chr2R_16990001 RAL-900_125b 1303 chr2R 17064066 17064113 chr2R 17064242 17064289 11 175 8.5 9.5 9.0 1.1 223 chr2R 17064066 intron CG6967 + chr2R 17064178 intron CG6967 + chr2R 17064289 exon CG6967 + chr2R_11_17060001 chr2R_17060001 RAL-900_125b 1304 chr2R 17080327 17080338 chr2R 17080490 17080501 5 163 15.0 8.5 11.8 0.4 174 chr2R 17080327 intron CG30460 - chr2R 17080414 intron CG30460 - chr2R 17080501 intron CG30460 - chr2R_5_17080001 chr2R_17080001 RAL-900_125b 1305 chr2R 17132808 17132869 chr2R 17132958 17133019 32 150 12.5 9.0 10.8 2.7 211 chr2R 17132808 intergenic not near genes chr2R 17132914 intergenic not near genes chr2R 17133019 intergenic Acp54A1 + chr2R_32_17130001 chr2R_17130001 RAL-900_125b 1306 chr2R 17147205 17147258 chr2R 17152285 17152339 jockey 18 5081 11.5 14.0 12.8 1.3 5134 chr2R 17147205 intergenic not near genes chr2R 17149772 intergenic not near genes chr2R 17152339 intergenic not near genes chr2R_18_17145001 chr2R_17145001 RAL-900_125b 1307 chr2R 17161304 17161363 chr2R 17161561 17161617 25 256 9.0 5.5 7.2 3.0 313 chr2R 17161304 intergenic CG30457 - chr2R 17161460 intergenic not near genes chr2R 17161617 intergenic not near genes chr2R_25_17160001 chr2R_17160001 RAL-900_125b 1308 chr2R 17176352 17176374 chr2R 17182592 17182614 diver 7 6240 0.0 16.5 8.2 0.8 6262 chr2R 17176352 intergenic not near genes chr2R 17179483 intergenic not near genes chr2R 17182614 intergenic not near genes chr2R_7_17175001 chr2R_17175001 RAL-900_125b 1309 chr2R 17194425 17194490 chr2R 17194614 17194673 27 188 6.5 8.5 7.5 3.2 248 chr2R 17194425 intergenic not near genes chr2R 17194549 intergenic not near genes chr2R 17194673 intergenic not near genes chr2R_27_17190001 chr2R_17190001 RAL-900_125b 1310 chr2R 17236465 17236524 chr2R 17241719 17241778 copia 18 5253 13.5 11.0 12.2 1.4 5313 chr2R 17236465 intron mbl + chr2R 17239122 intron mbl + chr2R 17241778 intron mbl + chr2R_18_17235001 chr2R_17235001 RAL-900_125b 1311 chr2R 17299723 17299742 chr2R 17299961 17299997 8 243 18.5 7.5 13.0 0.6 274 chr2R 17299723 intron mbl + chr2R 17299860 intron mbl + chr2R 17299997 intron mbl + chr2R_8_17295001 chr2R_17295001 RAL-900_125b 1312 chr2R 17299746 17299777 chr2R 17299960 17300032 8 241 9.0 7.5 8.2 0.9 286 chr2R 17299746 intron mbl + chr2R 17299889 intron mbl + chr2R 17300032 intron mbl + chr2R_8_17295001 chr2R_17295001 RAL-900_125b 1313 chr2R 17381539 17381611 chr2R 17381677 17381749 31 137 8.0 13.0 10.5 2.7 210 chr2R 17381539 intergenic not near genes chr2R 17381644 intergenic not near genes chr2R 17381749 intergenic not near genes chr2R_31_17380001 chr2R_17380001 RAL-900_125b 1314 chr2R 17419893 17419963 chr2R 17420024 17420091 7 132 0.5 5.5 3.0 1.8 198 chr2R 17419893 5` UTR cnk - chr2R 17419992 5` UTR cnk - chr2R 17420091 intergenic cnk -,l(2)k01209 + chr2R_7_17415001 chr2R_17415001 RAL-900_125b 1315 chr2R 17448140 17448145 chr2R 17448500 17448505 INE-1 6 360 23.5 12.5 18.0 0.3 365 chr2R 17448140 intergenic mthl3 - chr2R 17448322 intergenic mthl3 - chr2R 17448505 intergenic mthl3 - chr2R_6_17445001 chr2R_17445001 RAL-900_125b 1316 chr2R 17458961 17459030 chr2R 17459096 17459162 24 135 8.5 9.5 9.0 2.4 201 chr2R 17458961 intron CG14478 + chr2R 17459062 intron CG14478 + chr2R 17459162 intron CG14478 + chr2R_24_17455001 chr2R_17455001 RAL-900_125b 1317 chr2R 17459132 17459204 chr2R 17459416 17459488 33 284 9.0 8.0 8.5 3.5 356 chr2R 17459132 intron CG14478 + chr2R 17459310 intron CG14478 + chr2R 17459488 intron CG14478 + chr2R_33_17455001 chr2R_17455001 RAL-900_125b 1318 chr2R 17470285 17470355 chr2R 17470420 17470489 20 134 7.5 0.0 3.8 4.2 204 chr2R 17470285 intron qkr54B + chr2R 17470387 intron qkr54B + chr2R 17470489 intron qkr54B + chr2R_20_17470001 chr2R_17470001 RAL-900_125b 1319 chr2R 17485876 17485946 chr2R 17490688 17490756 F-element 27 4811 8.0 10.0 9.0 2.7 4880 chr2R 17485876 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488316 intron NT5E-2 + chr2R 17490756 intron NT5E-2 + chr2R_27_17485001 chr2R_17485001 RAL-900_125b 1320 chr2R 17532195 17532240 chr2R 17532334 17532379 18 138 10.5 10.0 10.2 1.6 184 chr2R 17532195 intron Patronin - chr2R 17532287 intron Patronin - chr2R 17532379 intron Patronin - chr2R_18_17530001 chr2R_17530001 RAL-900_125b 1321 chr2R 17556390 17556463 chr2R 17556526 17556598 21 135 11.5 5.0 8.2 2.3 208 chr2R 17556390 intergenic MESR4 + chr2R 17556494 intergenic MESR4 + chr2R 17556598 intergenic MESR4 +,Klp54D + chr2R_21_17555001 chr2R_17555001 RAL-900_125b 1322 chr2R 17629556 17629574 chr2R 17629685 17629703 12 127 20.0 10.0 15.0 0.8 147 chr2R 17629556 intron,intron CG10936 -,rhi - chr2R 17629630 intron,intron CG10936 -,rhi - chr2R 17629703 intron,intron CG10936 -,rhi - chr2R_12_17625001 chr2R_17625001 RAL-900_125b 1323 chr2R 17629575 17629631 chr2R 17629684 17629755 21 127 9.5 9.5 9.5 2.0 180 chr2R 17629575 intron,intron CG10936 -,rhi - chr2R 17629665 intron,intron CG10936 -,rhi - chr2R 17629755 intron,intron CG10936 -,rhi - chr2R_21_17625001 chr2R_17625001 RAL-900_125b 1324 chr2R 17655161 17655172 chr2R 17655288 17655299 4 127 18.5 8.0 13.2 0.3 138 chr2R 17655161 intron CCHa1-R - chr2R 17655230 intron CCHa1-R - chr2R 17655299 intron CCHa1-R - chr2R_4_17655001 chr2R_17655001 RAL-900_125b 1325 chr2R 17655173 17655230 chr2R 17655287 17655357 33 120 8.0 8.5 8.2 3.6 184 chr2R 17655173 intron CCHa1-R - chr2R 17655265 intron CCHa1-R - chr2R 17655357 intron CCHa1-R - chr2R_33_17655001 chr2R_17655001 RAL-900_125b 1326 chr2R 17679569 17679602 chr2R 17679746 17679779 12 177 0.5 10.5 5.5 1.8 210 chr2R 17679569 intron Sema-1b - chr2R 17679674 intron Sema-1b - chr2R 17679779 intron Sema-1b - chr2R_12_17675001 chr2R_17675001 RAL-900_125b 1327 chr2R 17703165 17703236 chr2R 17703289 17703366 41 130 6.5 8.0 7.2 5.0 201 chr2R 17703165 intron,5` UTR Uhg1 +,snoRNA:Me18S-A28a + chr2R 17703266 5` UTR Uhg1 + chr2R 17703366 3` UTR CG6424 - chr2R_41_17700001 chr2R_17700001 RAL-900_125b 1328 chr2R 17709938 17710114 chr2R 17710079 17710242 44 139 1.5 0.0 0.8 24.4 304 chr2R 17709938 intron CG6424 - chr2R 17710090 intron CG6424 - chr2R 17710242 intron CG6424 - chr2R_44_17710001 chr2R_17710001 RAL-900_125b 1329 chr2R 17782319 17782391 chr2R 17783572 17783644 pogo 26 1253 6.5 6.0 6.2 3.6 1325 chr2R 17782319 intergenic CG33981 -,fab1 - chr2R 17782982 intergenic not near genes chr2R 17783644 intergenic mir-31a - chr2R_26_17780001 chr2R_17780001 RAL-900_125b 1330 chr2R 17783976 17784054 chr2R 17784265 17784318 pogo 23 286 6.0 6.0 6.0 3.3 342 chr2R 17783976 intergenic mir-31a - chr2R 17784147 intergenic mir-31a - chr2R 17784318 intergenic mir-31a - chr2R_23_17780001 chr2R_17780001 RAL-900_125b 1331 chr2R 17785041 17785063 chr2R 17785179 17785201 4 138 20.0 19.5 19.8 0.2 160 chr2R 17785041 intergenic not near genes chr2R 17785121 intergenic not near genes chr2R 17785201 intergenic not near genes chr2R_4_17785001 chr2R_17785001 RAL-900_125b 1332 chr2R 17798379 17798414 chr2R 17798903 17798941 297 9 526 13.0 13.0 13.0 0.6 562 chr2R 17798379 intron Dhit + chr2R 17798660 intron Dhit + chr2R 17798941 3` UTR Dhit + chr2R_9_17795001 chr2R_17795001 RAL-900_125b 1333 chr2R 17831977 17831981 chr2R 17832109 17832113 4 132 0.0 9.5 4.8 0.7 136 chr2R 17831977 intron grh + chr2R 17832045 intron grh + chr2R 17832113 intron grh + chr2R_4_17830001 chr2R_17830001 RAL-900_125b 1334 chr2R 17860125 17860180 chr2R 17860257 17860312 33 132 18.5 8.5 13.5 2.3 187 chr2R 17860125 3` UTR olf186-F + chr2R 17860218 3` UTR olf186-F + chr2R 17860312 3` UTR olf186-F + chr2R_33_17860001 chr2R_17860001 RAL-900_125b 1335 chr2R 17929095 17929133 chr2R 17929223 17929251 12 136 7.0 11.5 9.2 1.2 156 chr2R 17929095 intergenic not near genes chr2R 17929173 intergenic not near genes chr2R 17929251 intergenic not near genes chr2R_12_17925001 chr2R_17925001 RAL-900_125b 1336 chr2R 17963281 17963291 chr2R 17963464 17963474 6 183 19.0 12.0 15.5 0.4 193 chr2R 17963281 intergenic not near genes chr2R 17963378 intergenic not near genes chr2R 17963474 intergenic not near genes chr2R_6_17960001 chr2R_17960001 RAL-900_125b 1337 chr2R 17982874 17982947 chr2R 17983009 17983082 28 134 8.0 6.5 7.2 3.4 208 chr2R 17982874 intron dpr13 - chr2R 17982978 intron dpr13 - chr2R 17983082 intron dpr13 - chr2R_28_17980001 chr2R_17980001 RAL-900_125b 1338 chr2R 17984619 17984668 chr2R 17984751 17984775 24 131 5.5 5.5 5.5 3.7 156 chr2R 17984619 intron dpr13 - chr2R 17984697 intron dpr13 - chr2R 17984775 intron dpr13 - chr2R_24_17980001 chr2R_17980001 RAL-900_125b 1339 chr2R 17997117 17997188 chr2R 17997249 17997320 23 130 7.5 8.5 8.0 2.6 203 chr2R 17997117 intron dpr13 - chr2R 17997218 intron dpr13 - chr2R 17997320 intron dpr13 - chr2R_23_17995001 chr2R_17995001 RAL-900_125b 1340 chr2R 17997978 17998046 chr2R 17998109 17998177 33 129 10.0 7.5 8.8 3.4 199 chr2R 17997978 intron dpr13 - chr2R 17998078 intron dpr13 - chr2R 17998177 intron dpr13 - chr2R_33_17995001 chr2R_17995001 RAL-900_125b 1341 chr2R 18045145 18045216 chr2R 18045349 18045383 35 203 8.0 9.5 8.8 3.6 238 chr2R 18045145 intergenic CG5770 - chr2R 18045264 intergenic CG5770 - chr2R 18045383 intergenic CG5770 - chr2R_35_18045001 chr2R_18045001 RAL-900_125b 1342 chr2R 18045631 18045691 chr2R 18046033 18046093 jockey 31 402 14.0 11.5 12.8 2.2 462 chr2R 18045631 intergenic not near genes chr2R 18045862 intergenic not near genes chr2R 18046093 intergenic CG5767 - chr2R_31_18045001 chr2R_18045001 RAL-900_125b 1343 chr2R 18074552 18074623 chr2R 18074678 18074749 29 125 8.0 7.0 7.5 3.4 197 chr2R 18074552 intron CG34386 + chr2R 18074650 intron CG34386 + chr2R 18074749 intron CG34386 + chr2R_29_18070001 chr2R_18070001 RAL-900_125b 1344 chr2R 18089145 18089224 chr2R 18089307 18089384 17 159 3.0 10.0 6.5 2.3 239 chr2R 18089145 intron CG34386 + chr2R 18089264 intron CG34386 + chr2R 18089384 intron CG34386 + chr2R_17_18085001 chr2R_18085001 RAL-900_125b 1345 chr2R 18111010 18111086 chr2R 18111356 18111432 42 348 64.0 63.5 63.8 0.6 422 chr2R 18111010 intergenic not near genes chr2R 18111221 intergenic not near genes chr2R 18111432 intergenic not near genes chr2R_42_18110001 chr2R_18110001 RAL-900_125b 1346 chr2R 18111647 18111704 chr2R 18115564 18115622 F-element 29 3918 15.0 10.0 12.5 2.1 3975 chr2R 18111647 intergenic not near genes chr2R 18113634 intergenic not near genes chr2R 18115622 intergenic not near genes chr2R_29_18110001 chr2R_18110001 RAL-900_125b 1347 chr2R 18141827 18141861 chr2R 18141965 18141997 10 138 8.0 8.5 8.2 1.1 170 chr2R 18141827 intron pAbp + chr2R 18141912 intron pAbp + chr2R 18141997 intron pAbp + chr2R_10_18140001 chr2R_18140001 RAL-900_125b 1348 chr2R 18144821 18144873 chr2R 18144968 18144990 5 151 40.0 37.5 38.8 0.1 169 chr2R 18144821 exon pAbp + chr2R 18144906 intron pAbp + chr2R 18144990 exon pAbp + chr2R_5_18140001 chr2R_18140001 RAL-900_125b 1349 chr2R 18195163 18195189 chr2R 18195301 18195322 8 133 12.0 8.5 10.2 0.7 159 chr2R 18195163 intergenic not near genes chr2R 18195242 intergenic not near genes chr2R 18195322 intergenic not near genes chr2R_8_18195001 chr2R_18195001 RAL-900_125b 1350 chr2R 18268559 18268617 chr2R 18268690 18268749 5 132 6.0 0.0 3.0 1.2 190 chr2R 18268559 intergenic not near genes chr2R 18268654 intergenic not near genes chr2R 18268749 intergenic not near genes chr2R_5_18265001 chr2R_18265001 RAL-900_125b 1351 chr2R 18318329 18318345 chr2R 18318460 18318476 9 131 5.5 0.0 2.8 2.4 147 chr2R 18318329 intron sbb - chr2R 18318402 intron sbb - chr2R 18318476 intron sbb - chr2R_9_18315001 chr2R_18315001 RAL-900_125b 1352 chr2R 18358349 18358372 chr2R 18372611 18372634 roo 10 14262 17.5 0.0 8.8 1.0 14285 chr2R 18358349 intergenic not near genes chr2R 18365492 intergenic not near genes chr2R 18372634 intergenic not near genes chr2R_10_18365001 chr2R_18365001 RAL-900_125b 1353 chr2R 18391922 18391994 chr2R 18392053 18392124 30 131 5.5 7.5 6.5 4.0 202 chr2R 18391922 intergenic not near genes chr2R 18392023 intergenic not near genes chr2R 18392124 intergenic not near genes chr2R_30_18390001 chr2R_18390001 RAL-900_125b 1354 chr2R 18398677 18398687 chr2R 18402508 18402518 6 3831 33.5 24.0 28.8 0.2 3841 chr2R 18398677 exon GstE1 + chr2R 18400598 intergenic GstE3 +,GstE2 + chr2R 18402518 intergenic not near genes chr2R_6_18400001 chr2R_18400001 RAL-900_125b 1355 chr2R 18405705 18405779 chr2R 18405836 18405908 15 130 5.5 5.0 5.2 2.4 203 chr2R 18405705 intergenic GstE6 +,GstE5 + chr2R 18405806 intergenic GstE6 +,GstE5 + chr2R 18405908 intergenic GstE6 + chr2R_15_18405001 chr2R_18405001 RAL-900_125b 1356 chr2R 18471894 18471925 chr2R 18472020 18472041 11 125 4.0 7.0 5.5 1.7 147 chr2R 18471894 intron CG30116 - chr2R 18471968 intron CG30116 - chr2R 18472041 intron CG30116 - chr2R_11_18470001 chr2R_18470001 RAL-900_125b 1357 chr2R 18480472 18480483 chr2R 18480629 18480640 5 157 0.0 0.0 0.0 5.0 168 chr2R 18480472 intron CG30116 - chr2R 18480556 intron CG30116 - chr2R 18480640 intron CG30116 - chr2R_5_18480001 chr2R_18480001 RAL-900_125b 1358 chr2R 18487791 18487829 chr2R 18495292 18495330 blood 17 7501 5.5 7.5 6.5 2.3 7539 chr2R 18487791 intron CG30116 - chr2R 18491560 intron CG30116 - chr2R 18495330 intron CG30116 - chr2R_17_18490001 chr2R_18490001 RAL-900_125b 1359 chr2R 18510813 18510889 chr2R 18510986 18511073 34 177 10.5 0.0 5.2 5.5 260 chr2R 18510813 intergenic not near genes chr2R 18510943 intergenic not near genes chr2R 18511073 intergenic not near genes chr2R_34_18510001 chr2R_18510001 RAL-900_125b 1360 chr2R 18519908 18519970 chr2R 18520030 18520097 27 124 7.0 8.5 7.8 3.1 189 chr2R 18519908 intron CG43066 + chr2R 18520002 intron CG43066 + chr2R 18520097 intron CG43066 + chr2R_27_18520001 chr2R_18520001 RAL-900_125b 1361 chr2R 18575755 18575764 chr2R 18581993 18582002 3S18 4 6237 22.0 9.0 15.5 0.2 6247 chr2R 18575755 intron GEFmeso - chr2R 18578878 intron GEFmeso - chr2R 18582002 intron GEFmeso - chr2R_4_18575001 chr2R_18575001 RAL-900_125b 1362 chr2R 18575768 18575822 chr2R 18581986 18582060 3S18 29 6231 7.5 7.5 7.5 3.4 6292 chr2R 18575768 intron GEFmeso - chr2R 18578914 intron GEFmeso - chr2R 18582060 intron GEFmeso - chr2R_29_18575001 chr2R_18575001 RAL-900_125b 1363 chr2R 18585777 18585819 chr2R 18585890 18585945 16 124 10.5 12.5 11.5 1.3 168 chr2R 18585777 intron GEFmeso - chr2R 18585861 intron GEFmeso - chr2R 18585945 intron GEFmeso - chr2R_16_18585001 chr2R_18585001 RAL-900_125b 1364 chr2R 18590823 18590897 chr2R 18600025 18600099 roo 32 9195 7.0 8.5 7.8 3.6 9276 chr2R 18590823 intron GEFmeso - chr2R 18595461 intron GEFmeso - chr2R 18600099 intron GEFmeso - chr2R_32_18595001 chr2R_18595001 RAL-900_125b 1365 chr2R 18666048 18666075 chr2R 18666186 18666213 7 138 6.0 9.5 7.8 0.8 165 chr2R 18666048 intergenic CG33136 - chr2R 18666130 intergenic CG33136 - chr2R 18666213 intergenic CG33136 - chr2R_7_18665001 chr2R_18665001 RAL-900_125b 1366 chr2R 18692850 18692920 chr2R 18692987 18693056 23 136 6.0 4.0 5.0 3.8 206 chr2R 18692850 exon Sik3 + chr2R 18692953 intron Sik3 + chr2R 18693056 intron Sik3 + chr2R_23_18690001 chr2R_18690001 RAL-900_125b 1367 chr2R 18736739 18736781 chr2R 18736914 18736956 20 171 19.5 11.5 15.5 1.2 217 chr2R 18736739 intron Hs3st-A + chr2R 18736848 intron Hs3st-A + chr2R 18736956 intron Hs3st-A + chr2R_20_18735001 chr2R_18735001 RAL-900_125b 1368 chr2R 18745025 18745099 chr2R 18745180 18745254 24 154 10.0 7.0 8.5 2.5 229 chr2R 18745025 intron Hs3st-A + chr2R 18745140 intron Hs3st-A + chr2R 18745254 intron Hs3st-A + chr2R_24_18745001 chr2R_18745001 RAL-900_125b 1369 chr2R 18769596 18769609 chr2R 18769753 18769766 9 156 13.5 16.5 15.0 0.6 170 chr2R 18769596 intron Mctp + chr2R 18769681 intron Mctp + chr2R 18769766 intron Mctp + chr2R_9_18765001 chr2R_18765001 RAL-900_125b 1370 chr2R 18808019 18808085 chr2R 18808158 18808224 12 139 0.0 0.0 0.0 12.0 205 chr2R 18808019 intergenic CG15096 - chr2R 18808122 intergenic CG15096 - chr2R 18808224 intergenic CG15096 - chr2R_12_18805001 chr2R_18805001 RAL-900_125b 1371 chr2R 18819006 18819025 chr2R 18819134 18819153 7 128 12.0 0.0 6.0 1.0 147 chr2R 18819006 intergenic Phb2 + chr2R 18819080 intergenic Phb2 + chr2R 18819153 intergenic Phb2 + chr2R_7_18815001 chr2R_18815001 RAL-900_125b 1372 chr2R 18827664 18827722 chr2R 18827794 18827852 30 130 8.0 11.0 9.5 2.9 188 chr2R 18827664 intron CG15097 - chr2R 18827758 intron CG15097 - chr2R 18827852 intron CG15097 - chr2R_30_18825001 chr2R_18825001 RAL-900_125b 1373 chr2R 18862266 18862409 chr2R 18862399 18862544 21 156 0.0 0.0 0.0 21.0 278 chr2R 18862266 intergenic Jheh3 - chr2R 18862405 intergenic Jheh3 -,CG43069 + chr2R 18862544 intergenic CG43069 +,Jheh3 - chr2R_21_18860001 chr2R_18860001 RAL-900_125b 1374 chr2R 18896401 18896458 chr2R 18896629 18896686 15 225 6.5 9.5 8.0 1.7 285 chr2R 18896401 intron sano + chr2R 18896544 intron sano + chr2R 18896686 intron sano + chr2R_15_18895001 chr2R_18895001 RAL-900_125b 1375 chr2R 18926460 18926518 chr2R 18926597 18926655 25 137 6.5 0.0 3.2 6.0 195 chr2R 18926460 intron sano + chr2R 18926558 intron sano + chr2R 18926655 intron sano + chr2R_25_18925001 chr2R_18925001 RAL-900_125b 1376 chr2R 18943584 18943640 chr2R 18943730 18943801 16 163 8.5 9.0 8.8 1.6 217 chr2R 18943584 intron sano + chr2R 18943692 intron sano + chr2R 18943801 intron sano + chr2R_16_18940001 chr2R_18940001 RAL-900_125b 1377 chr2R 18950093 18950137 chr2R 18950249 18950293 12 156 6.5 13.5 10.0 1.1 200 chr2R 18950093 intron sano + chr2R 18950193 intron sano + chr2R 18950293 intron sano + chr2R_12_18950001 chr2R_18950001 RAL-900_125b 1378 chr2R 18951242 18951287 chr2R 18951554 18951599 11 306 12.5 7.5 10.0 1.0 357 chr2R 18951242 intron sano + chr2R 18951420 intron sano + chr2R 18951599 intron sano + chr2R_11_18950001 chr2R_18950001 RAL-900_125b 1379 chr2R 18953113 18953132 chr2R 18953250 18953269 8 136 17.0 9.5 13.2 0.6 156 chr2R 18953113 intron sano + chr2R 18953191 intron sano + chr2R 18953269 intron sano + chr2R_8_18950001 chr2R_18950001 RAL-900_125b 1380 chr2R 18953137 18953183 chr2R 18953249 18953320 15 134 7.5 9.5 8.5 1.6 183 chr2R 18953137 intron sano + chr2R 18953228 intron sano + chr2R 18953320 intron sano + chr2R_15_18950001 chr2R_18950001 RAL-900_125b 1381 chr2R 18964871 18964934 chr2R 18964997 18965044 19 125 12.5 9.5 11.0 1.6 173 chr2R 18964871 intergenic not near genes chr2R 18964958 intergenic not near genes chr2R 18965044 intergenic not near genes chr2R_19_18960001 chr2R_18960001 RAL-900_125b 1382 chr2R 19010702 19010774 chr2R 19010862 19010916 26 155 13.0 7.0 10.0 2.4 214 chr2R 19010702 intergenic not near genes chr2R 19010809 intergenic not near genes chr2R 19010916 intergenic not near genes chr2R_26_19010001 chr2R_19010001 RAL-900_125b 1383 chr2R 19025261 19025329 chr2R 19025544 19025592 15 276 0.0 4.0 2.0 5.0 331 chr2R 19025261 intron 5-HT1B - chr2R 19025426 intron 5-HT1B - chr2R 19025592 intron 5-HT1B - chr2R_15_19025001 chr2R_19025001 RAL-900_125b 1384 chr2R 19025996 19026050 chr2R 19026186 19026240 18 190 17.0 5.5 11.2 1.5 244 chr2R 19025996 exon 5-HT1B - chr2R 19026118 intron 5-HT1B - chr2R 19026240 intron 5-HT1B - chr2R_18_19025001 chr2R_19025001 RAL-900_125b 1385 chr2R 19026927 19026937 chr2R 19027056 19027066 8 129 16.0 0.0 8.0 0.9 139 chr2R 19026927 intron 5-HT1B - chr2R 19026996 intron 5-HT1B - chr2R 19027066 intron 5-HT1B - chr2R_8_19025001 chr2R_19025001 RAL-900_125b 1386 chr2R 19040696 19040755 chr2R 19040826 19040878 35 129 1.5 13.5 7.5 4.1 182 chr2R 19040696 intergenic not near genes chr2R 19040787 intergenic not near genes chr2R 19040878 intergenic not near genes chr2R_35_19040001 chr2R_19040001 RAL-900_125b 1387 chr2R 19065497 19065573 chr2R 19065630 19065705 28 131 7.0 6.0 6.5 3.7 208 chr2R 19065497 intergenic not near genes chr2R 19065601 intergenic not near genes chr2R 19065705 intergenic not near genes chr2R_28_19065001 chr2R_19065001 RAL-900_125b 1388 chr2R 19067710 19067754 chr2R 19067821 19067880 13 125 6.5 0.0 3.2 3.1 170 chr2R 19067710 intron 5-HT1A + chr2R 19067795 intron 5-HT1A + chr2R 19067880 intron 5-HT1A + chr2R_13_19065001 chr2R_19065001 RAL-900_125b 1389 chr2R 19109683 19109716 chr2R 19109901 19109934 14 218 8.0 9.5 8.8 1.4 251 chr2R 19109683 intron 5-HT1A + chr2R 19109808 intron 5-HT1A + chr2R 19109934 intron 5-HT1A + chr2R_14_19105001 chr2R_19105001 RAL-900_125b 1390 chr2R 19109718 19109737 chr2R 19109900 19109955 8 209 5.5 9.5 7.5 0.9 237 chr2R 19109718 intron 5-HT1A + chr2R 19109836 intron 5-HT1A + chr2R 19109955 intron 5-HT1A + chr2R_8_19105001 chr2R_19105001 RAL-900_125b 1391 chr2R 19165691 19165764 chr2R 19165830 19165903 29 139 8.5 7.5 8.0 3.2 212 chr2R 19165691 intron CG10737 + chr2R 19165797 intron CG10737 + chr2R 19165903 intron CG10737 + chr2R_29_19165001 chr2R_19165001 RAL-900_125b 1392 chr2R 19183314 19183375 chr2R 19183430 19183501 23 125 6.5 9.0 7.8 2.6 187 chr2R 19183314 intron hppy + chr2R 19183408 intron hppy + chr2R 19183501 intron hppy + chr2R_23_19180001 chr2R_19180001 RAL-900_125b 1393 chr2R 19352308 19352365 chr2R 19352437 19352494 23 129 13.0 9.5 11.2 1.9 186 chr2R 19352308 intron Rgk1 - chr2R 19352401 intron Rgk1 - chr2R 19352494 intron Rgk1 - chr2R_23_19350001 chr2R_19350001 RAL-900_125b 1394 chr2R 19363137 19363219 chr2R 19363263 19363345 20 126 1.5 1.0 1.2 9.1 208 chr2R 19363137 intergenic not near genes chr2R 19363241 intergenic CG10051 + chr2R 19363345 intergenic CG10051 + chr2R_20_19360001 chr2R_19360001 RAL-900_125b 1395 chr2R 19384860 19384909 chr2R 19384986 19385035 5 126 8.5 14.0 11.2 0.4 175 chr2R 19384860 exon CG10073 + chr2R 19384948 3` UTR CG10073 + chr2R 19385035 intergenic CG10073 + chr2R_5_19380001 chr2R_19380001 RAL-900_125b 1396 chr2R 19452087 19452097 chr2R 19452380 19452390 4 293 5.0 15.0 10.0 0.4 303 chr2R 19452087 intergenic CG7744 +,betaTub56D - chr2R 19452238 intergenic CG7744 + chr2R 19452390 intergenic CG7744 + chr2R_4_19450001 chr2R_19450001 RAL-900_125b 1397 chr2R 19536422 19536494 chr2R 19536554 19536625 30 132 5.5 5.5 5.5 4.6 203 chr2R 19536422 intron sm - chr2R 19536524 intron sm - chr2R 19536625 intron sm - chr2R_30_19535001 chr2R_19535001 RAL-900_125b 1398 chr2R 19555544 19555565 chr2R 19555678 19555699 9 132 9.5 9.0 9.2 0.9 155 chr2R 19555544 intron sm - chr2R 19555622 intron sm - chr2R 19555699 intron sm - chr2R_9_19555001 chr2R_19555001 RAL-900_125b 1399 chr2R 19555568 19555607 chr2R 19555672 19555725 14 124 3.5 8.5 6.0 2.0 157 chr2R 19555568 intron sm - chr2R 19555646 intron sm - chr2R 19555725 intron sm - chr2R_14_19555001 chr2R_19555001 RAL-900_125b 1400 chr2R 19572084 19572162 chr2R 19572212 19572284 22 127 6.5 9.0 7.8 2.5 200 chr2R 19572084 intron sm - chr2R 19572184 intron sm - chr2R 19572284 intron sm - chr2R_22_19570001 chr2R_19570001 RAL-900_125b 1401 chr2R 19602617 19602635 chr2R 19602768 19602786 7 151 20.0 7.0 13.5 0.5 169 chr2R 19602617 intron sm - chr2R 19602702 intron sm - chr2R 19602786 intron sm - chr2R_7_19600001 chr2R_19600001 RAL-900_125b 1402 chr2R 19602636 19602683 chr2R 19602767 19602834 30 148 8.5 7.0 7.8 3.4 198 chr2R 19602636 intron sm - chr2R 19602735 intron sm - chr2R 19602834 intron sm - chr2R_30_19600001 chr2R_19600001 RAL-900_125b 1403 chr2R 19673032 19673054 chr2R 19673183 19673205 8 151 11.5 21.0 16.2 0.5 173 chr2R 19673032 3` UTR isopeptidase-T-3 + chr2R 19673118 3` UTR isopeptidase-T-3 + chr2R 19673205 3` UTR isopeptidase-T-3 + chr2R_8_19670001 chr2R_19670001 RAL-900_125b 1404 chr2R 19714691 19714734 chr2R 19714817 19714860 19 126 2.0 14.5 8.2 2.1 169 chr2R 19714691 3` UTR CG8517 + chr2R 19714776 3` UTR CG8517 + chr2R 19714860 3` UTR CG8517 + chr2R_19_19710001 chr2R_19710001 RAL-900_125b 1405 chr2R 19715813 19715824 chr2R 19723332 19723343 blood 7 7518 17.5 9.0 13.2 0.5 7530 chr2R 19715813 intergenic not near genes chr2R 19719578 intergenic not near genes chr2R 19723343 intergenic not near genes chr2R_7_19715001 chr2R_19715001 RAL-900_125b 1406 chr2R 19715825 19715856 chr2R 19723331 19723360 blood 15 7516 11.5 9.0 10.2 1.3 7535 chr2R 19715825 intergenic not near genes chr2R 19719592 intergenic not near genes chr2R 19723360 intergenic not near genes chr2R_15_19715001 chr2R_19715001 RAL-900_125b 1407 chr2R 19776569 19776583 chr2R 19779942 19779956 jockey 8 3373 14.5 11.0 12.8 0.6 3387 chr2R 19776569 intergenic not near genes chr2R 19778262 intergenic not near genes chr2R 19779956 intergenic not near genes chr2R_8_19775001 chr2R_19775001 RAL-900_125b 1408 chr2R 19776585 19776609 chr2R 19779922 19779982 jockey 17 3371 9.0 8.0 8.5 1.8 3397 chr2R 19776585 intergenic not near genes chr2R 19778284 intergenic not near genes chr2R 19779982 intergenic not near genes chr2R_17_19775001 chr2R_19775001 RAL-900_125b 1409 chr2R 19794825 19794902 chr2R 19794978 19794991 19 141 5.5 6.0 5.8 2.8 166 chr2R 19794825 intergenic not near genes chr2R 19794908 intergenic not near genes chr2R 19794991 intergenic not near genes chr2R_19_19790001 chr2R_19790001 RAL-900_125b 1410 chr2R 19807623 19807696 chr2R 19807761 19807834 30 137 6.0 10.0 8.0 3.3 211 chr2R 19807623 intergenic not near genes chr2R 19807728 intergenic not near genes chr2R 19807834 intergenic not near genes chr2R_30_19805001 chr2R_19805001 RAL-900_125b 1411 chr2R 19837663 19837740 chr2R 19837812 19837889 35 148 6.5 10.0 8.2 3.8 226 chr2R 19837663 intergenic not near genes chr2R 19837776 intergenic not near genes chr2R 19837889 intergenic not near genes chr2R_35_19835001 chr2R_19835001 RAL-900_125b 1412 chr2R 19914806 19914867 chr2R 19922268 19922329 mdg1 24 7462 8.5 11.5 10.0 2.2 7523 chr2R 19914806 intergenic not near genes chr2R 19918568 intergenic not near genes chr2R 19922329 intergenic not near genes chr2R_24_19915001 chr2R_19915001 RAL-900_125b 1413 chr2R 19957384 19957388 chr2R 19962636 19962640 copia 4 5252 18.5 9.0 13.8 0.3 5256 chr2R 19957384 intergenic CG44623 + chr2R 19960012 intergenic not near genes chr2R 19962640 intergenic not near genes chr2R_4_19960001 chr2R_19960001 RAL-900_125b 1414 chr2R 19957390 19957451 chr2R 19962634 19962703 copia 19 5243 8.5 9.0 8.8 1.9 5313 chr2R 19957390 intergenic CG44623 + chr2R 19960046 intergenic not near genes chr2R 19962703 intergenic not near genes chr2R_19_19960001 chr2R_19960001 RAL-900_125b 1415 chr2R 20006354 20006391 chr2R 20006491 20006528 13 137 14.5 0.0 7.2 1.6 174 chr2R 20006354 intergenic not near genes chr2R 20006441 intergenic not near genes chr2R 20006528 intergenic not near genes chr2R_13_20005001 chr2R_20005001 RAL-900_125b 1416 chr2R 20006396 20006403 chr2R 20006487 20006540 6 129 11.5 0.0 5.8 0.9 144 chr2R 20006396 intergenic not near genes chr2R 20006468 intergenic not near genes chr2R 20006540 intergenic not near genes chr2R_6_20005001 chr2R_20005001 RAL-900_125b 1417 chr2R 20012360 20012441 chr2R 20012487 20012569 18 127 7.0 7.0 7.0 2.2 209 chr2R 20012360 intergenic not near genes chr2R 20012464 intergenic not near genes chr2R 20012569 intergenic not near genes chr2R_18_20010001 chr2R_20010001 RAL-900_125b 1418 chr2R 20047196 20047269 chr2R 20047325 20047398 27 128 2.5 6.5 4.5 4.9 202 chr2R 20047196 intergenic not near genes chr2R 20047297 intergenic not near genes chr2R 20047398 intergenic not near genes chr2R_27_20045001 chr2R_20045001 RAL-900_125b 1419 chr2R 20069206 20069247 chr2R 20071896 20071937 opus 14 2689 0.0 13.0 6.5 1.9 2731 chr2R 20069206 intergenic not near genes chr2R 20070572 intergenic not near genes chr2R 20071937 intergenic not near genes chr2R_14_20070001 chr2R_20070001 RAL-900_125b 1420 chr2R 20079817 20079866 chr2R 20079943 20079998 15 127 1.0 12.0 6.5 2.0 181 chr2R 20079817 intergenic not near genes chr2R 20079908 intergenic not near genes chr2R 20079998 intergenic not near genes chr2R_15_20075001 chr2R_20075001 RAL-900_125b 1421 chr2R 20125729 20125743 chr2R 20125855 20125869 6 126 3.5 12.0 7.8 0.7 140 chr2R 20125729 intergenic not near genes chr2R 20125799 intergenic not near genes chr2R 20125869 intergenic not near genes chr2R_6_20125001 chr2R_20125001 RAL-900_125b 1422 chr2R 20223912 20223986 chr2R 20224047 20224121 24 135 6.0 9.0 7.5 2.8 209 chr2R 20223912 intergenic not near genes chr2R 20224016 intergenic not near genes chr2R 20224121 intergenic not near genes chr2R_24_20220001 chr2R_20220001 RAL-900_125b 1423 chr2R 20346622 20346691 chr2R 20346778 20346847 23 155 5.5 9.5 7.5 2.7 225 chr2R 20346622 intergenic CG16741 + chr2R 20346734 intergenic CG16741 + chr2R 20346847 intergenic CG16741 + chr2R_23_20345001 chr2R_20345001 RAL-900_125b 1424 chr2R 20368469 20368496 chr2R 20377706 20377733 roo 9 9236 15.5 8.5 12.0 0.7 9264 chr2R 20368469 intergenic not near genes chr2R 20373101 intergenic not near genes chr2R 20377733 intergenic not near genes chr2R_9_20370001 chr2R_20370001 RAL-900_125b 1425 chr2R 20379110 20379143 chr2R 20379243 20379276 7 133 13.5 2.0 7.8 0.8 166 chr2R 20379110 intergenic not near genes chr2R 20379193 intergenic not near genes chr2R 20379276 intergenic not near genes chr2R_7_20375001 chr2R_20375001 RAL-900_125b 1426 chr2R 20383162 20383239 chr2R 20383295 20383321 16 124 8.5 5.0 6.8 2.1 159 chr2R 20383162 intergenic not near genes chr2R 20383242 intergenic not near genes chr2R 20383321 intergenic not near genes chr2R_16_20380001 chr2R_20380001 RAL-900_125b 1427 chr2R 20389578 20389651 chr2R 20389705 20389764 17 124 8.5 11.5 10.0 1.5 186 chr2R 20389578 intergenic not near genes chr2R 20389671 intergenic not near genes chr2R 20389764 intergenic not near genes chr2R_17_20385001 chr2R_20385001 RAL-900_125b 1428 chr2R 20395121 20395191 chr2R 20395249 20395319 30 128 8.0 4.0 6.0 4.3 198 chr2R 20395121 intergenic not near genes chr2R 20395220 intergenic not near genes chr2R 20395319 intergenic not near genes chr2R_30_20395001 chr2R_20395001 RAL-900_125b 1429 chr2R 20405031 20405040 chr2R 20405167 20405176 6 136 24.0 10.0 17.0 0.3 145 chr2R 20405031 intergenic not near genes chr2R 20405104 intergenic not near genes chr2R 20405176 intergenic not near genes chr2R_6_20405001 chr2R_20405001 RAL-900_125b 1430 chr2R 20405041 20405089 chr2R 20405163 20405225 22 134 12.0 10.0 11.0 1.8 184 chr2R 20405041 intergenic not near genes chr2R 20405133 intergenic not near genes chr2R 20405225 intergenic not near genes chr2R_22_20405001 chr2R_20405001 RAL-900_125b 1431 chr2R 20413277 20413288 chr2R 20413411 20413422 4 132 13.5 6.0 9.8 0.4 145 chr2R 20413277 intergenic not near genes chr2R 20413350 intergenic not near genes chr2R 20413422 intergenic not near genes chr2R_4_20410001 chr2R_20410001 RAL-900_125b 1432 chr2R 20413292 20413322 chr2R 20413407 20413450 7 124 7.5 5.5 6.5 0.9 158 chr2R 20413292 intergenic not near genes chr2R 20413371 intergenic not near genes chr2R 20413450 intergenic not near genes chr2R_7_20410001 chr2R_20410001 RAL-900_125b 1433 chr2R 20414436 20414509 chr2R 20414569 20414642 25 131 8.0 7.5 7.8 2.8 206 chr2R 20414436 intergenic not near genes chr2R 20414539 intergenic not near genes chr2R 20414642 intergenic not near genes chr2R_25_20410001 chr2R_20410001 RAL-900_125b 1434 chr2R 20422582 20422644 chr2R 20422729 20422787 15 146 2.0 11.0 6.5 2.0 205 chr2R 20422582 intergenic not near genes chr2R 20422684 intergenic not near genes chr2R 20422787 intergenic not near genes chr2R_15_20420001 chr2R_20420001 RAL-900_125b 1435 chr2R 20433038 20433071 chr2R 20433152 20433201 17 129 9.0 8.0 8.5 1.8 163 chr2R 20433038 intron CG12484 + chr2R 20433120 intron CG12484 + chr2R 20433201 intron CG12484 + chr2R_17_20430001 chr2R_20430001 RAL-900_125b 1436 chr2R 20489849 20489907 chr2R 20490002 20490060 29 151 5.5 13.5 9.5 2.8 211 chr2R 20489849 intergenic not near genes chr2R 20489954 intergenic not near genes chr2R 20490060 intergenic not near genes chr2R_29_20485001 chr2R_20485001 RAL-900_125b 1437 chr2R 20506207 20506241 chr2R 20506318 20506368 12 129 6.5 5.5 6.0 1.7 161 chr2R 20506207 3` UTR,5` UTR CR44644 -,CR44645 + chr2R 20506288 3` UTR,5` UTR CR44644 -,CR44645 + chr2R 20506368 3` UTR,5` UTR CR44644 -,CR44645 + chr2R_12_20505001 chr2R_20505001 RAL-900_125b 1438 chr2R 20506907 20506934 chr2R 20507039 20507066 12 132 0.0 4.5 2.2 3.8 159 chr2R 20506907 intergenic CR44645 + chr2R 20506986 intergenic CR44645 + chr2R 20507066 intergenic CR44645 + chr2R_12_20505001 chr2R_20505001 RAL-900_125b 1439 chr2R 20522995 20523002 chr2R 20523156 20523163 5 161 22.5 5.0 13.8 0.3 168 chr2R 20522995 intergenic not near genes chr2R 20523079 intergenic not near genes chr2R 20523163 intergenic not near genes chr2R_5_20520001 chr2R_20520001 RAL-900_125b 1440 chr2R 20523011 20523065 chr2R 20523149 20523226 26 152 9.0 4.5 6.8 3.3 215 chr2R 20523011 intergenic not near genes chr2R 20523118 intergenic not near genes chr2R 20523226 intergenic not near genes chr2R_26_20520001 chr2R_20520001 RAL-900_125b 1441 chr2R 20535529 20535588 chr2R 20535651 20535685 8 111 10.5 0.0 5.2 1.3 156 chr2R 20535529 3` UTR CG18067 + chr2R 20535607 3` UTR CG18067 + chr2R 20535685 3` UTR CG18067 + chr2R_8_20535001 chr2R_20535001 RAL-900_125b 1442 chr2R 20555282 20555313 chr2R 20555416 20555447 13 133 16.5 5.0 10.8 1.1 165 chr2R 20555282 intergenic not near genes chr2R 20555364 intergenic not near genes chr2R 20555447 intergenic not near genes chr2R_13_20555001 chr2R_20555001 RAL-900_125b 1443 chr2R 20581751 20581820 chr2R 20581889 20581893 29 124 5.5 3.5 4.5 5.3 142 chr2R 20581751 intron qsm - chr2R 20581822 intron qsm - chr2R 20581893 intron qsm - chr2R_29_20580001 chr2R_20580001 RAL-900_125b 1444 chr2R 20590616 20590664 chr2R 20590745 20590793 11 129 5.5 8.0 6.8 1.4 177 chr2R 20590616 intron bl + chr2R 20590704 intron bl + chr2R 20590793 intron bl + chr2R_11_20590001 chr2R_20590001 RAL-900_125b 1445 chr2R 20601669 20601752 chr2R 20601804 20601887 11 135 7.5 6.5 7.0 1.4 218 chr2R 20601669 intron bl + chr2R 20601778 intron bl + chr2R 20601887 intron bl + chr2R_11_20600001 chr2R_20600001 RAL-900_125b 1446 chr2R 20604151 20604220 chr2R 20604278 20604322 25 121 5.5 9.5 7.5 2.9 171 chr2R 20604151 intron bl + chr2R 20604236 intron bl + chr2R 20604322 intron bl + chr2R_25_20600001 chr2R_20600001 RAL-900_125b 1447 chr2R 20674419 20674495 chr2R 20674841 20674913 27 421 5.0 5.0 5.0 4.5 494 chr2R 20674419 intergenic not near genes chr2R 20674666 intergenic not near genes chr2R 20674913 intergenic not near genes chr2R_27_20670001 chr2R_20670001 RAL-900_125b 1448 chr2R 20678683 20678743 chr2R 20679052 20679112 15 366 8.5 0.5 4.5 2.7 429 chr2R 20678683 intergenic not near genes chr2R 20678898 intergenic not near genes chr2R 20679112 intergenic not near genes chr2R_15_20675001 chr2R_20675001 RAL-900_125b 1449 chr2R 20702629 20702696 chr2R 20702755 20702822 7 120 7.0 8.5 7.8 0.8 193 chr2R 20702629 intron dpr + chr2R 20702726 intron dpr + chr2R 20702822 intron dpr + chr2R_7_20700001 chr2R_20700001 RAL-900_125b 1450 chr2R 20739396 20739401 chr2R 20744214 20744219 F-element 5 4818 23.0 8.0 15.5 0.3 4823 chr2R 20739396 intron dpr + chr2R 20741808 intron dpr + chr2R 20744219 intron dpr + chr2R_5_20740001 chr2R_20740001 RAL-900_125b 1451 chr2R 20739408 20739470 chr2R 20744210 20744288 F-element 21 4814 9.5 7.0 8.2 2.3 4880 chr2R 20739408 intron dpr + chr2R 20741848 intron dpr + chr2R 20744288 intron dpr + chr2R_21_20740001 chr2R_20740001 RAL-900_125b 1452 chr2R 20757429 20757455 chr2R 20757550 20757582 12 126 6.0 10.0 8.0 1.3 153 chr2R 20757429 intergenic not near genes chr2R 20757506 intergenic not near genes chr2R 20757582 intergenic not near genes chr2R_12_20755001 chr2R_20755001 RAL-900_125b 1453 chr2R 20763898 20763959 chr2R 20764123 20764199 37 235 5.0 5.0 5.0 6.2 301 chr2R 20763898 intergenic not near genes chr2R 20764048 intergenic not near genes chr2R 20764199 intergenic not near genes chr2R_37_20760001 chr2R_20760001 RAL-900_125b 1454 chr2R 20783263 20783322 chr2R 20788084 20788144 F-element 18 4822 13.5 8.0 10.8 1.5 4881 chr2R 20783263 intergenic not near genes chr2R 20785704 intergenic not near genes chr2R 20788144 intergenic CG43666 - chr2R_18_20785001 chr2R_20785001 RAL-900_125b 1455 chr2R 20817483 20817519 chr2R 20818038 20818074 10 547 11.5 6.5 9.0 1.0 591 chr2R 20817483 intergenic not near genes chr2R 20817778 intergenic not near genes chr2R 20818074 intergenic not near genes chr2R_10_20815001 chr2R_20815001 RAL-900_125b 1456 chr2R 20838662 20838726 chr2R 20838958 20839022 31 294 0.0 10.0 5.0 5.2 360 chr2R 20838662 5` UTR CR44667 + chr2R 20838842 intergenic CR44667 + chr2R 20839022 intergenic CR44667 + chr2R_31_20835001 chr2R_20835001 RAL-900_125b 1457 chr2R 20875207 20875246 chr2R 20875349 20875388 12 137 6.5 13.0 9.8 1.1 181 chr2R 20875207 intron Ipk1 + chr2R 20875298 exon Ipk1 + chr2R 20875388 exon Ipk1 + chr2R_12_20875001 chr2R_20875001 RAL-900_125b 1458 chr2R 20880833 20880889 chr2R 20880945 20880947 4 100 9.0 8.0 8.5 0.4 114 chr2R 20880833 exon Cib2 + chr2R 20880890 exon Cib2 + chr2R 20880947 intron Cib2 + chr2R_4_20880001 chr2R_20880001 RAL-900_125b 1459 chr2R 20916399 20916449 chr2R 20917823 20917888 28 1426 50.0 71.5 60.8 0.5 1489 chr2R 20916399 intergenic Rx + chr2R 20917144 exon Rx + chr2R 20917888 intron Rx + chr2R_28_20915001 chr2R_20915001 RAL-900_125b 1460 chr2R 20942344 20942359 chr2R 20942477 20942492 10 133 0.0 10.0 5.0 1.7 148 chr2R 20942344 intergenic not near genes chr2R 20942418 intergenic not near genes chr2R 20942492 intergenic not near genes chr2R_10_20940001 chr2R_20940001 RAL-900_125b 1461 chr2R 20966981 20967060 chr2R 20967108 20967151 17 125 6.5 2.0 4.2 3.3 170 chr2R 20966981 intergenic not near genes chr2R 20967066 intergenic not near genes chr2R 20967151 intergenic not near genes chr2R_17_20965001 chr2R_20965001 RAL-900_125b 1462 chr2R 21057440 21057519 chr2R 21057571 21057654 14 131 6.0 0.0 3.0 3.5 214 chr2R 21057440 intergenic shg -,cpa + chr2R 21057547 intergenic cpa +,shg - chr2R 21057654 intergenic cpa +,shg - chr2R_14_21055001 chr2R_21055001 RAL-900_125b 1463 chr2R 21075638 21075710 chr2R 21075769 21075847 30 134 11.0 9.5 10.2 2.7 209 chr2R 21075638 intron Treh + chr2R 21075742 intron Treh + chr2R 21075847 intron Treh + chr2R_30_21075001 chr2R_21075001 RAL-900_125b 1464 chr2R 21080260 21080271 chr2R 21080387 21080399 6 128 18.0 4.5 11.2 0.5 139 chr2R 21080260 intron Treh + chr2R 21080330 intron Treh + chr2R 21080399 intron Treh + chr2R_6_21080001 chr2R_21080001 RAL-900_125b 1465 chr2R 21103489 21103536 chr2R 21103619 21103666 27 129 11.5 0.0 5.8 4.0 177 chr2R 21103489 intron ktub + chr2R 21103578 intron ktub + chr2R 21103666 intron ktub + chr2R_27_21100001 chr2R_21100001 RAL-900_125b 1466 chr2R 21151103 21151142 chr2R 21153765 21153825 opus 13 2677 1.0 9.5 5.2 2.1 2722 chr2R 21151103 intron CG30389 - chr2R 21152464 intron CG30389 - chr2R 21153825 intron CG30389 - chr2R_13_21150001 chr2R_21150001 RAL-900_125b 1467 chr2R 21232599 21232658 chr2R 21232819 21232878 12 220 7.5 3.5 5.5 1.8 279 chr2R 21232599 intron ASPP - chr2R 21232738 intron ASPP - chr2R 21232878 intron ASPP - chr2R_12_21230001 chr2R_21230001 RAL-900_125b 1468 chr2R 21258454 21258491 chr2R 21258582 21258619 20 126 0.0 12.5 6.2 2.8 165 chr2R 21258454 intron Rgk3 + chr2R 21258536 intron Rgk3 + chr2R 21258619 intron Rgk3 + chr2R_20_21255001 chr2R_21255001 RAL-900_125b 1469 chr2R 21259616 21259665 chr2R 21259745 21259794 11 124 7.5 10.0 8.8 1.1 178 chr2R 21259616 intron Rgk3 + chr2R 21259705 intron Rgk3 + chr2R 21259794 intron Rgk3 + chr2R_11_21255001 chr2R_21255001 RAL-900_125b 1470 chr2R 21260025 21260061 chr2R 21260171 21260199 13 145 15.5 16.0 15.8 0.8 174 chr2R 21260025 intron Rgk3 + chr2R 21260112 intron Rgk3 + chr2R 21260199 intron Rgk3 + chr2R_13_21260001 chr2R_21260001 RAL-900_125b 1471 chr2R 21264693 21264766 chr2R 21264825 21264897 23 132 4.0 9.0 6.5 3.1 204 chr2R 21264693 intron Rgk3 + chr2R 21264795 intron Rgk3 + chr2R 21264897 intron,3` UTR Rgk3 +,CG30391 - chr2R_23_21260001 chr2R_21260001 RAL-900_125b 1472 chr2R 21285383 21285431 chr2R 21285510 21285552 23 126 11.5 13.5 12.5 1.7 169 chr2R 21285383 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285468 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285552 3` UTR,3` UTR MFS16 +,CG10505 - chr2R_23_21285001 chr2R_21285001 RAL-900_125b 1473 chr2R 21322898 21322938 chr2R 21323032 21323055 19 131 10.0 5.0 7.5 2.2 157 chr2R 21322898 5` UTR CG30394 - chr2R 21322976 5` UTR CG30394 - chr2R 21323055 5` UTR CG30394 - chr2R_19_21320001 chr2R_21320001 RAL-900_125b 1474 chr2R 21322939 21322968 chr2R 21323022 21323075 16 124 6.5 5.5 6.0 2.3 136 chr2R 21322939 5` UTR CG30394 - chr2R 21323007 5` UTR CG30394 - chr2R 21323075 intron CG30394 - chr2R_16_21320001 chr2R_21320001 RAL-900_125b 1475 chr2R 21352514 21352526 chr2R 21352675 21352687 6 161 18.0 5.5 11.8 0.5 173 chr2R 21352514 intergenic not near genes chr2R 21352600 intergenic not near genes chr2R 21352687 intergenic not near genes chr2R_6_21350001 chr2R_21350001 RAL-900_125b 1476 chr2R 21363127 21363181 chr2R 21363275 21363320 21 144 0.0 17.0 8.5 2.2 193 chr2R 21363127 intron cv-2 - chr2R 21363224 intron cv-2 - chr2R 21363320 intron cv-2 - chr2R_21_21360001 chr2R_21360001 RAL-900_125b 1477 chr2R 21365776 21365785 chr2R 21365912 21365920 4 136 1.0 0.0 0.5 2.7 144 chr2R 21365776 intron cv-2 - chr2R 21365848 intron cv-2 - chr2R 21365920 intron cv-2 - chr2R_4_21365001 chr2R_21365001 RAL-900_125b 1478 chr2R 21370476 21370538 chr2R 21370633 21370695 25 157 10.0 13.0 11.5 2.0 219 chr2R 21370476 intron cv-2 - chr2R 21370586 intron cv-2 - chr2R 21370695 intron cv-2 - chr2R_25_21370001 chr2R_21370001 RAL-900_125b 1479 chr2R 21415242 21415321 chr2R 21415382 21415445 30 134 8.0 7.0 7.5 3.5 203 chr2R 21415242 intron Sdc - chr2R 21415344 intron Sdc - chr2R 21415445 intron Sdc - chr2R_30_21415001 chr2R_21415001 RAL-900_125b 1480 chr2R 21421301 21421352 chr2R 21421430 21421477 27 129 14.5 12.5 13.5 1.9 176 chr2R 21421301 intron Sdc - chr2R 21421389 intron Sdc - chr2R 21421477 intron Sdc - chr2R_27_21420001 chr2R_21420001 RAL-900_125b 1481 chr2R 21447067 21447111 chr2R 21447220 21447266 4 153 7.0 7.5 7.2 0.5 199 chr2R 21447067 intron Sdc - chr2R 21447166 intron Sdc - chr2R 21447266 intron Sdc - chr2R_4_21445001 chr2R_21445001 RAL-900_125b 1482 chr2R 21469899 21469971 chr2R 21470037 21470080 20 130 5.0 6.5 5.8 2.9 181 chr2R 21469899 intron Sdc - chr2R 21469990 intron Sdc - chr2R 21470080 intron Sdc - chr2R_20_21465001 chr2R_21465001 RAL-900_125b 1483 chr2R 21481164 21481242 chr2R 21481365 21481443 41 201 9.0 11.5 10.2 3.7 279 chr2R 21481164 5` UTR Sdc - chr2R 21481304 intergenic Sdc - chr2R 21481443 intergenic Sdc -,Sara + chr2R_41_21480001 chr2R_21480001 RAL-900_125b 1484 chr2R 21546743 21546767 chr2R 21546869 21546888 16 122 11.0 4.5 7.8 1.8 145 chr2R 21546743 intron Egfr + chr2R 21546816 intron Egfr + chr2R 21546888 intron Egfr + chr2R_16_21545001 chr2R_21545001 RAL-900_125b 1485 chr2R 21546785 21546814 chr2R 21546868 21546888 11 97 7.5 4.5 6.0 1.6 103 chr2R 21546785 intron Egfr + chr2R 21546836 intron Egfr + chr2R 21546888 intron Egfr + chr2R_11_21545001 chr2R_21545001 RAL-900_125b 1486 chr2R 21592807 21592841 chr2R 21592932 21592969 9 129 11.5 10.5 11.0 0.8 162 chr2R 21592807 intergenic not near genes chr2R 21592888 intergenic not near genes chr2R 21592969 intergenic not near genes chr2R_9_21590001 chr2R_21590001 RAL-900_125b 1487 chr2R 21660829 21660899 chr2R 21660972 21661028 20 142 9.5 6.5 8.0 2.2 199 chr2R 21660829 intergenic pirk - chr2R 21660928 intergenic pirk - chr2R 21661028 3` UTR pirk - chr2R_20_21660001 chr2R_21660001 RAL-900_125b 1488 chr2R 21721527 21721609 chr2R 21721665 21721746 29 135 5.5 0.0 2.8 7.6 219 chr2R 21721527 intron LBR + chr2R 21721636 intron LBR + chr2R 21721746 intron LBR + chr2R_29_21720001 chr2R_21720001 RAL-900_125b 1489 chr2R 21726652 21726657 chr2R 21726800 21726805 4 148 22.0 0.0 11.0 0.3 153 chr2R 21726652 intergenic not near genes chr2R 21726728 intergenic not near genes chr2R 21726805 intergenic not near genes chr2R_4_21725001 chr2R_21725001 RAL-900_125b 1490 chr2R 21738230 21738248 chr2R 21747441 21747458 roo 4 9210 16.0 9.5 12.8 0.3 9228 chr2R 21738230 intergenic not near genes chr2R 21742844 intergenic not near genes chr2R 21747458 intergenic not near genes chr2R_4_21740001 chr2R_21740001 RAL-900_125b 1491 chr2R 21738250 21738271 chr2R 21747439 21747471 roo 10 9196 11.5 8.5 10.0 0.9 9221 chr2R 21738250 intergenic not near genes chr2R 21742860 intergenic not near genes chr2R 21747471 intergenic not near genes chr2R_10_21740001 chr2R_21740001 RAL-900_125b 1492 chr2R 21753042 21753105 chr2R 21753577 21753640 roo 40 534 8.5 8.5 8.5 4.2 598 chr2R 21753042 intergenic not near genes chr2R 21753341 intergenic not near genes chr2R 21753640 intergenic not near genes chr2R_40_21750001 chr2R_21750001 RAL-900_125b 1493 chr2R 21809487 21809544 chr2R 21817777 21817834 roo 26 8290 15.5 13.5 14.5 1.7 8347 chr2R 21809487 intergenic not near genes chr2R 21813660 intergenic not near genes chr2R 21817834 intergenic not near genes chr2R_26_21810001 chr2R_21810001 RAL-900_125b 1494 chr2R 21830054 21830114 chr2R 21830197 21830257 24 142 5.0 8.5 6.8 3.1 203 chr2R 21830054 intron CG13492 - chr2R 21830156 intron CG13492 - chr2R 21830257 intron CG13492 - chr2R_24_21830001 chr2R_21830001 RAL-900_125b 1495 chr2R 21857299 21857371 chr2R 21857440 21857512 37 139 7.5 5.5 6.5 4.9 213 chr2R 21857299 intergenic not near genes chr2R 21857406 intergenic not near genes chr2R 21857512 intergenic not near genes chr2R_37_21855001 chr2R_21855001 RAL-900_125b 1496 chr2R 21888274 21888316 chr2R 21888415 21888457 18 141 10.0 13.5 11.8 1.4 183 chr2R 21888274 intron Fili + chr2R 21888366 intron Fili + chr2R 21888457 intron Fili + chr2R_18_21885001 chr2R_21885001 RAL-900_125b 1497 chr2R 21906227 21906302 chr2R 21906378 21906453 24 150 9.0 4.5 6.8 3.1 226 chr2R 21906227 intron Fili + chr2R 21906340 intron Fili + chr2R 21906453 intron Fili + chr2R_24_21905001 chr2R_21905001 RAL-900_125b 1498 chr2R 21911347 21911417 chr2R 21911686 21911756 24 337 6.0 8.5 7.2 2.9 409 chr2R 21911347 intron Fili + chr2R 21911552 intron Fili + chr2R 21911756 intron Fili + chr2R_24_21910001 chr2R_21910001 RAL-900_125b 1499 chr2R 21914308 21914327 chr2R 21914445 21914464 8 137 6.5 5.0 5.8 1.2 156 chr2R 21914308 intron Fili + chr2R 21914386 intron Fili + chr2R 21914464 intron Fili + chr2R_8_21910001 chr2R_21910001 RAL-900_125b 1500 chr2R 21922852 21922921 chr2R 21923072 21923120 24 225 6.0 7.5 6.8 3.1 268 chr2R 21922852 intron Fili + chr2R 21922986 intron Fili + chr2R 21923120 intron Fili + chr2R_24_21920001 chr2R_21920001 RAL-900_125b 1501 chr2R 21963147 21963218 chr2R 21963282 21963355 30 134 7.5 5.5 6.5 4.0 208 chr2R 21963147 intergenic not near genes chr2R 21963251 intergenic not near genes chr2R 21963355 intergenic not near genes chr2R_30_21960001 chr2R_21960001 RAL-900_125b 1502 chr2R 22012947 22013011 chr2R 22013092 22013156 29 145 8.0 12.5 10.2 2.6 209 chr2R 22012947 intron CG34370 - chr2R 22013052 intron CG34370 - chr2R 22013156 intron CG34370 - chr2R_29_22010001 chr2R_22010001 RAL-900_125b 1503 chr2R 22029431 22029505 chr2R 22029619 22029693 35 188 7.5 7.0 7.2 4.3 262 chr2R 22029431 intron CG34370 - chr2R 22029562 intron CG34370 - chr2R 22029693 intron CG34370 - chr2R_35_22025001 chr2R_22025001 RAL-900_125b 1504 chr2R 22072632 22072711 chr2R 22072767 22072846 15 135 7.5 8.5 8.0 1.7 214 chr2R 22072632 exon CG11474 - chr2R 22072739 intron CG11474 - chr2R 22072846 exon CG11474 - chr2R_15_22070001 chr2R_22070001 RAL-900_125b 1505 chr2R 22099826 22099830 chr2R 22099957 22099961 5 131 6.0 6.5 6.2 0.7 135 chr2R 22099826 intergenic CG11073 - chr2R 22099894 intergenic CG11073 - chr2R 22099961 intergenic CG11073 - chr2R_5_22095001 chr2R_22095001 RAL-900_125b 1506 chr2R 22099831 22099881 chr2R 22099956 22100012 27 131 4.5 6.0 5.2 4.4 181 chr2R 22099831 intergenic CG11073 - chr2R 22099922 intergenic CG11073 - chr2R 22100012 intergenic CG11073 - chr2R_27_22095001 chr2R_22095001 RAL-900_125b 1507 chr2R 22132244 22132284 chr2R 22132374 22132414 21 130 10.5 12.5 11.5 1.7 170 chr2R 22132244 intergenic not near genes chr2R 22132329 intergenic not near genes chr2R 22132414 intergenic not near genes chr2R_21_22130001 chr2R_22130001 RAL-900_125b 1508 chr2R 22134158 22134172 chr2R 22134314 22134328 6 156 0.0 11.5 5.8 0.9 170 chr2R 22134158 intergenic not near genes chr2R 22134243 intergenic not near genes chr2R 22134328 intergenic not near genes chr2R_6_22130001 chr2R_22130001 RAL-900_125b 1509 chr2R 22185631 22185708 chr2R 22185777 22185857 23 148 4.0 0.0 2.0 7.7 226 chr2R 22185631 exon MED16 + chr2R 22185744 3` UTR MED16 + chr2R 22185857 3` UTR MED16 + chr2R_23_22185001 chr2R_22185001 RAL-900_125b 1510 chr2R 22189396 22189469 chr2R 22189574 22189646 14 175 6.5 6.0 6.2 1.9 250 chr2R 22189396 3` UTR Vps35 + chr2R 22189521 3` UTR Vps35 + chr2R 22189646 3` UTR Vps35 + chr2R_14_22185001 chr2R_22185001 RAL-900_125b 1511 chr2R 22292134 22292208 chr2R 22292373 22292447 34 238 4.0 11.5 7.8 3.9 313 chr2R 22292134 5` UTR CR43422 + chr2R 22292290 5` UTR CR43422 + chr2R 22292447 intergenic CR43422 + chr2R_34_22290001 chr2R_22290001 RAL-900_125b 1512 chr2R 22349651 22349664 chr2R 22351485 22351498 jockey 7 1834 21.5 10.5 16.0 0.4 1847 chr2R 22349651 intron Liprin-gamma - chr2R 22350574 intron Liprin-gamma - chr2R 22351498 intron Liprin-gamma - chr2R_7_22350001 chr2R_22350001 RAL-900_125b 1513 chr2R 22349665 22349721 chr2R 22351484 22351555 jockey 17 1832 9.5 10.0 9.8 1.6 1890 chr2R 22349665 intron Liprin-gamma - chr2R 22350610 intron Liprin-gamma - chr2R 22351555 intron Liprin-gamma - chr2R_17_22350001 chr2R_22350001 RAL-900_125b 1514 chr2R 22360151 22360210 chr2R 22360285 22360344 23 134 4.5 13.0 8.8 2.3 193 chr2R 22360151 intron Liprin-gamma - chr2R 22360248 intron Liprin-gamma - chr2R 22360344 intron Liprin-gamma - chr2R_23_22360001 chr2R_22360001 RAL-900_125b 1515 chr2R 22360340 22360402 chr2R 22360823 22360831 jockey 4 470 11.5 8.0 9.8 0.4 491 chr2R 22360340 intron Liprin-gamma - chr2R 22360586 intron Liprin-gamma - chr2R 22360831 intron Liprin-gamma - chr2R_4_22360001 chr2R_22360001 RAL-900_125b 1516 chr2R 22374589 22374637 chr2R 22374726 22374774 34 136 3.5 6.5 5.0 5.7 185 chr2R 22374589 3` UTR CR44759 - chr2R 22374682 3` UTR CR44759 - chr2R 22374774 3` UTR CR44759 - chr2R_34_22370001 chr2R_22370001 RAL-900_125b 1517 chr2R 22444762 22444811 chr2R 22444913 22444977 12 161 0.0 11.5 5.8 1.8 215 chr2R 22444762 intergenic not near genes chr2R 22444870 intergenic not near genes chr2R 22444977 intergenic not near genes chr2R_12_22440001 chr2R_22440001 RAL-900_125b 1518 chr2R 22525704 22525733 chr2R 22529309 22529338 jockey 7 3605 20.0 8.5 14.2 0.5 3634 chr2R 22525704 intron px - chr2R 22527521 intron px - chr2R 22529338 intron px - chr2R_7_22525001 chr2R_22525001 RAL-900_125b 1519 chr2R 22525734 22525774 chr2R 22529304 22529360 jockey 21 3598 11.0 7.5 9.2 2.1 3626 chr2R 22525734 intron px - chr2R 22527547 intron px - chr2R 22529360 intron px - chr2R_21_22525001 chr2R_22525001 RAL-900_125b 1520 chr2R 22541654 22541721 chr2R 22542125 22542198 21 475 8.5 7.5 8.0 2.3 544 chr2R 22541654 intron px - chr2R 22541926 intron px - chr2R 22542198 intron px - chr2R_21_22540001 chr2R_22540001 RAL-900_125b 1521 chr2R 22545588 22545634 chr2R 22545717 22545763 19 129 16.5 8.0 12.2 1.4 175 chr2R 22545588 intron px - chr2R 22545676 intron px - chr2R 22545763 intron px - chr2R_19_22545001 chr2R_22545001 RAL-900_125b 1522 chr2R 22588109 22588152 chr2R 22588254 22588279 12 140 9.5 8.5 9.0 1.2 170 chr2R 22588109 intron dnr1 - chr2R 22588194 intron dnr1 - chr2R 22588279 intron dnr1 - chr2R_12_22585001 chr2R_22585001 RAL-900_125b 1523 chr2R 22646418 22646434 chr2R 22646560 22646576 8 142 19.5 0.0 9.8 0.7 158 chr2R 22646418 intergenic CG2852 -,CG30195 - chr2R 22646497 intergenic CG30195 -,CG2852 - chr2R 22646576 intergenic CG30195 -,CG2852 - chr2R_8_22645001 chr2R_22645001 RAL-900_125b 1524 chr2R 22654321 22654341 chr2R 22654452 22654472 5 131 13.5 7.5 10.5 0.4 151 chr2R 22654321 exon Cyp6d2 - chr2R 22654396 exon Cyp6d2 - chr2R 22654472 5` UTR Cyp6d2 - chr2R_5_22650001 chr2R_22650001 RAL-900_125b 1525 chr2R 22654351 22654395 chr2R 22654451 22654525 7 126 6.0 7.5 6.8 0.9 174 chr2R 22654351 exon Cyp6d2 - chr2R 22654438 5` UTR Cyp6d2 - chr2R 22654525 5` UTR Cyp6d2 - chr2R_7_22650001 chr2R_22650001 RAL-900_125b 1526 chr2R 22754019 22754078 chr2R 22754154 22754202 14 127 11.0 6.0 8.5 1.5 183 chr2R 22754019 intron CG42260 - chr2R 22754110 intron CG42260 - chr2R 22754202 intron CG42260 - chr2R_14_22750001 chr2R_22750001 RAL-900_125b 1527 chr2R 22774919 22774988 chr2R 22775388 22775457 jockey 37 467 12.5 10.5 11.5 3.0 538 chr2R 22774919 intron CG42260 - chr2R 22775188 intron CG42260 - chr2R 22775457 intron CG42260 - chr2R_37_22775001 chr2R_22775001 RAL-900_125b 1528 chr2R 22789085 22789128 chr2R 22789256 22789299 20 164 8.5 8.5 8.5 2.1 214 chr2R 22789085 intron CG42260 - chr2R 22789192 intron CG42260 - chr2R 22789299 intron CG42260 - chr2R_20_22785001 chr2R_22785001 RAL-900_125b 1529 chr2R 22835320 22835394 chr2R 22835446 22835465 25 120 9.5 5.0 7.2 3.0 145 chr2R 22835320 exon CG12490 + chr2R 22835392 exon CG12490 + chr2R 22835465 exon CG12490 + chr2R_25_22835001 chr2R_22835001 RAL-900_125b 1530 chr2R 22842986 22843047 chr2R 22844998 22845059 flea 28 2012 12.5 13.0 12.8 2.0 2073 chr2R 22842986 intergenic CG9826 + chr2R 22844022 intergenic not near genes chr2R 22845059 intergenic not near genes chr2R_28_22840001 chr2R_22840001 RAL-900_125b 1531 chr2R 22864941 22864953 chr2R 22865076 22865081 8 134 8.0 0.0 4.0 1.6 140 chr2R 22864941 intergenic not near genes chr2R 22865011 intergenic not near genes chr2R 22865081 intergenic not near genes chr2R_8_22865001 chr2R_22865001 RAL-900_125b 1532 chr2R 22907381 22907428 chr2R 22907501 22907511 19 122 8.5 6.5 7.5 2.2 130 chr2R 22907381 intron nahoda + chr2R 22907446 intron nahoda + chr2R 22907511 intron nahoda + chr2R_19_22905001 chr2R_22905001 RAL-900_125b 1533 chr2R 22958319 22958388 chr2R 22958494 22958563 35 175 5.5 9.5 7.5 4.1 244 chr2R 22958319 intergenic not near genes chr2R 22958441 intergenic not near genes chr2R 22958563 intergenic not near genes chr2R_35_22955001 chr2R_22955001 RAL-900_125b 1534 chr2R 22958762 22958801 chr2R 22963896 22963929 flea 6 5131 10.5 11.0 10.8 0.5 5167 chr2R 22958762 intergenic not near genes chr2R 22961346 intergenic not near genes chr2R 22963929 intergenic not near genes chr2R_6_22960001 chr2R_22960001 RAL-900_125b 1535 chr2R 22991587 22991651 chr2R 22991729 22991793 19 141 9.0 9.0 9.0 1.9 206 chr2R 22991587 intron twi + chr2R 22991690 intron twi + chr2R 22991793 intron twi + chr2R_19_22990001 chr2R_22990001 RAL-900_125b 1536 chr2R 23061698 23061780 chr2R 23061830 23061906 23 126 7.5 6.5 7.0 2.9 208 chr2R 23061698 3` UTR l(2)06496 - chr2R 23061802 3` UTR l(2)06496 - chr2R 23061906 3` UTR l(2)06496 - chr2R_23_23060001 chr2R_23060001 RAL-900_125b 1537 chr2R 23108922 23108954 chr2R 23109054 23109086 7 132 11.0 19.5 15.2 0.4 164 chr2R 23108922 intergenic not near genes chr2R 23109004 intergenic not near genes chr2R 23109086 intergenic not near genes chr2R_7_23105001 chr2R_23105001 RAL-900_125b 1538 chr2R 23115462 23115531 chr2R 23116026 23116095 39 564 5.0 8.5 6.8 5.0 633 chr2R 23115462 intergenic not near genes chr2R 23115778 intergenic not near genes chr2R 23116095 intergenic not near genes chr2R_39_23115001 chr2R_23115001 RAL-900_125b 1539 chr2R 23122861 23122939 chr2R 23122990 23123069 30 129 12.5 10.0 11.2 2.5 208 chr2R 23122861 intergenic not near genes chr2R 23122965 intergenic not near genes chr2R 23123069 intergenic not near genes chr2R_30_23120001 chr2R_23120001 RAL-900_125b 1540 chr2R 23155674 23155877 chr2R 23155811 23155988 39 131 2.5 0.0 1.2 17.7 314 chr2R 23155674 intron CG9899 + chr2R 23155831 intron CG9899 + chr2R 23155988 intron CG9899 + chr2R_39_23155001 chr2R_23155001 RAL-900_125b 1541 chr2R 23158297 23158355 chr2R 23158424 23158482 24 125 12.0 8.5 10.2 2.1 185 chr2R 23158297 intron CG9899 + chr2R 23158390 intron CG9899 + chr2R 23158482 intron CG9899 + chr2R_24_23155001 chr2R_23155001 RAL-900_125b 1542 chr2R 23236823 23236851 chr2R 23236967 23236995 11 144 2.5 13.5 8.0 1.2 172 chr2R 23236823 intergenic not near genes chr2R 23236909 intergenic not near genes chr2R 23236995 intergenic not near genes chr2R_11_23235001 chr2R_23235001 RAL-900_125b 1543 chr2R 23311697 23311756 chr2R 23311865 23311922 26 170 9.5 0.0 4.8 4.5 225 chr2R 23311697 intergenic not near genes chr2R 23311810 intergenic not near genes chr2R 23311922 intergenic not near genes chr2R_26_23310001 chr2R_23310001 RAL-900_125b 1544 chr2R 23315336 23315408 chr2R 23315559 23315619 24 218 4.0 4.5 4.2 4.6 283 chr2R 23315336 intergenic not near genes chr2R 23315478 intergenic not near genes chr2R 23315619 intergenic not near genes chr2R_24_23315001 chr2R_23315001 RAL-900_125b 1545 chr2R 23348767 23348837 chr2R 23348891 23348932 25 123 5.5 3.5 4.5 4.5 165 chr2R 23348767 intergenic not near genes chr2R 23348850 intergenic not near genes chr2R 23348932 intergenic not near genes chr2R_25_23345001 chr2R_23345001 RAL-900_125b 1546 chr2R 23351874 23351942 chr2R 23352010 23352061 24 132 10.5 11.0 10.8 2.0 187 chr2R 23351874 exon CG34210 + chr2R 23351968 exon CG34210 + chr2R 23352061 3` UTR CG34210 + chr2R_24_23350001 chr2R_23350001 RAL-900_125b 1547 chr2R 23402565 23402632 chr2R 23407691 23407758 flea 38 5125 11.5 11.5 11.5 3.0 5193 chr2R 23402565 intergenic CG3520 - chr2R 23405162 intergenic not near genes chr2R 23407758 intergenic not near genes chr2R_38_23405001 chr2R_23405001 RAL-900_125b 1548 chr2R 23410045 23410082 chr2R 23410570 23410592 11 524 13.0 3.5 8.2 1.2 547 chr2R 23410045 intergenic not near genes chr2R 23410318 intergenic not near genes chr2R 23410592 intergenic not near genes chr2R_11_23410001 chr2R_23410001 RAL-900_125b 1549 chr2R 23423689 23423764 chr2R 23423897 23423972 18 208 9.0 8.0 8.5 1.9 283 chr2R 23423689 intron CG9815 - chr2R 23423830 intron CG9815 - chr2R 23423972 intron CG9815 - chr2R_18_23420001 chr2R_23420001 RAL-900_125b 1550 chr2R 23442837 23442878 chr2R 23442961 23443006 6 128 8.0 4.0 6.0 0.9 169 chr2R 23442837 intergenic not near genes chr2R 23442922 intergenic not near genes chr2R 23443006 intergenic not near genes chr2R_6_23440001 chr2R_23440001 RAL-900_125b 1551 chr2R 23467523 23467588 chr2R 23467702 23467754 10 168 7.5 10.5 9.0 1.0 231 chr2R 23467523 intron CG43795 + chr2R 23467638 intron CG43795 + chr2R 23467754 intron CG43795 + chr2R_10_23465001 chr2R_23465001 RAL-900_125b 1552 chr2R 23518161 23518219 chr2R 23518289 23518348 17 128 6.0 8.0 7.0 2.1 187 chr2R 23518161 intergenic not near genes chr2R 23518254 intergenic not near genes chr2R 23518348 intergenic not near genes chr2R_17_23515001 chr2R_23515001 RAL-900_125b 1553 chr2R 23529530 23529541 chr2R 23537156 23537161 412 4 7624 14.5 9.0 11.8 0.3 7631 chr2R 23529530 exon bw - chr2R 23533346 intron bw - chr2R 23537161 exon bw - chr2R_4_23530001 chr2R_23530001 RAL-900_125b 1554 chr2R 23529547 23529607 chr2R 23537152 23537169 412 12 7599 6.0 8.5 7.2 1.5 7622 chr2R 23529547 intron bw - chr2R 23533358 intron bw - chr2R 23537169 exon bw - chr2R_12_23530001 chr2R_23530001 RAL-900_125b 1555 chr2R 23570358 23570429 chr2R 23570485 23570556 25 126 8.0 9.0 8.5 2.6 198 chr2R 23570358 intron apt + chr2R 23570457 intron apt + chr2R 23570556 intron apt + chr2R_25_23570001 chr2R_23570001 RAL-900_125b 1556 chr2R 23576847 23576915 chr2R 23576981 23577049 29 134 11.5 10.0 10.8 2.5 202 chr2R 23576847 intron apt + chr2R 23576948 intron apt + chr2R 23577049 intron apt + chr2R_29_23575001 chr2R_23575001 RAL-900_125b 1557 chr2R 23584442 23584483 chr2R 23584564 23584599 13 122 10.5 12.0 11.2 1.1 157 chr2R 23584442 intron apt + chr2R 23584520 intron apt + chr2R 23584599 intron apt + chr2R_13_23580001 chr2R_23580001 RAL-900_125b 1558 chr2R 23588045 23588074 chr2R 23588173 23588202 17 128 6.0 11.5 8.8 1.7 157 chr2R 23588045 intron apt + chr2R 23588124 intron apt + chr2R 23588202 intron apt + chr2R_17_23585001 chr2R_23585001 RAL-900_125b 1559 chr2R 23606991 23607191 chr2R 23607122 23607334 48 136 0.0 0.0 0.0 48.0 343 chr2R 23606991 intron CG17664 - chr2R 23607162 intron CG17664 - chr2R 23607334 intron CG17664 - chr2R_48_23605001 chr2R_23605001 RAL-900_125b 1560 chr2R 23719777 23719818 chr2R 23719895 23719940 26 134 11.0 1.5 6.2 3.6 163 chr2R 23719777 intron,exon Sesn +,CG18128 - chr2R 23719858 intron,5` UTR Sesn +,CG18128 - chr2R 23719940 intron Sesn + chr2R_26_23715001 chr2R_23715001 RAL-900_125b 1561 chr2R 23784429 23784506 chr2R 23784557 23784603 47 126 9.0 10.5 9.8 4.4 174 chr2R 23784429 intron CG9850 - chr2R 23784516 intron CG9850 - chr2R 23784603 intron CG9850 - chr2R_47_23780001 chr2R_23780001 RAL-900_125b 1562 chr2R 23819095 23819138 chr2R 23819240 23819283 17 143 16.5 7.5 12.0 1.3 188 chr2R 23819095 intergenic not near genes chr2R 23819189 intergenic not near genes chr2R 23819283 intergenic not near genes chr2R_17_23815001 chr2R_23815001 RAL-900_125b 1563 chr2R 23819863 23819940 chr2R 23820004 23820070 27 138 7.5 7.0 7.2 3.3 207 chr2R 23819863 intergenic CG5549 + chr2R 23819966 intergenic CG5549 + chr2R 23820070 intergenic CG5549 + chr2R_27_23815001 chr2R_23815001 RAL-900_125b 1564 chr2R 23914276 23914327 chr2R 23921933 23922001 412 20 7669 5.5 5.5 5.5 3.1 7725 chr2R 23914276 exon kcc + chr2R 23918138 intron kcc + chr2R 23922001 exon kcc + chr2R_20_23915001 chr2R_23915001 RAL-900_125b 1565 chr2R 23980320 23980356 chr2R 23980447 23980454 4 120 8.5 12.0 10.2 0.4 134 chr2R 23980320 exon Sox14 + chr2R 23980387 exon Sox14 + chr2R 23980454 exon Sox14 + chr2R_4_23980001 chr2R_23980001 RAL-900_125b 1566 chr2R 24031334 24031407 chr2R 24031468 24031540 42 132 6.0 9.5 7.8 4.8 206 chr2R 24031334 5` UTR CG30172 - chr2R 24031437 intergenic CG30172 -,Chi - chr2R 24031540 3` UTR Chi - chr2R_42_24030001 chr2R_24030001 RAL-900_125b 1567 chr2R 24077883 24077930 chr2R 24078009 24078056 29 125 13.5 7.0 10.2 2.6 173 chr2R 24077883 3` UTR Mlp60A + chr2R 24077970 3` UTR Mlp60A + chr2R 24078056 3` UTR Mlp60A + chr2R_29_24075001 chr2R_24075001 RAL-900_125b 1568 chr2R 24087140 24087217 chr2R 24087312 24087389 31 172 6.5 8.5 7.5 3.6 249 chr2R 24087140 intron snama + chr2R 24087264 intron snama + chr2R 24087389 intron snama + chr2R_31_24085001 chr2R_24085001 RAL-900_125b 1569 chr2R 24139280 24139359 chr2R 24139469 24139546 36 188 7.5 10.0 8.8 3.7 266 chr2R 24139280 intergenic CR44826 +,Dat + chr2R 24139413 intergenic Dat +,CR44826 + chr2R 24139546 intergenic Dat +,CR44826 + chr2R_36_24135001 chr2R_24135001 RAL-900_125b 1570 chr2R 24147024 24147095 chr2R 24154652 24154708 412 30 7623 6.5 7.5 7.0 3.8 7684 chr2R 24147024 intron Dat + chr2R 24150866 intron Dat + chr2R 24154708 intron Dat + chr2R_30_24150001 chr2R_24150001 RAL-900_125b 1571 chr2R 24177192 24177264 chr2R 24184727 24184772 412 32 7534 8.5 9.5 9.0 3.2 7580 chr2R 24177192 3` UTR Nop60B + chr2R 24180982 intron Nop60B + chr2R 24184772 3` UTR Nop60B + chr2R_32_24180001 chr2R_24180001 RAL-900_125b 1572 chr2R 24228363 24228428 chr2R 24228474 24228521 19 100 7.5 6.0 6.8 2.4 158 chr2R 24228363 intron CG30419 - chr2R 24228442 intron CG30419 - chr2R 24228521 intron CG30419 - chr2R_19_24225001 chr2R_24225001 RAL-900_125b 1573 chr2R 24320165 24320184 chr2R 24320287 24320295 8 123 9.5 13.0 11.2 0.7 130 chr2R 24320165 intergenic not near genes chr2R 24320230 intergenic not near genes chr2R 24320295 intergenic not near genes chr2R_8_24320001 chr2R_24320001 RAL-900_125b 1574 chr2R 24353381 24353417 chr2R 24361793 24361809 roo 18 8410 14.0 10.0 12.0 1.4 8428 chr2R 24353381 intron,intron bs +,CR44811 - chr2R 24357595 intron,intron bs +,CR44811 - chr2R 24361809 intron,intron bs +,CR44811 - chr2R_18_24355001 chr2R_24355001 RAL-900_125b 1575 chr2R 24430704 24430942 chr2R 24430887 24431080 15 140 0.5 0.0 0.2 12.5 376 chr2R 24430704 intergenic CG15873 - chr2R 24430892 intergenic CG15873 -,Pgam5-2 - chr2R 24431080 intergenic Pgam5-2 -,CG15873 - chr2R_15_24430001 chr2R_24430001 RAL-900_125b 1576 chr2R 24493036 24493119 chr2R 24493175 24493248 22 139 1.0 7.0 4.0 4.4 212 chr2R 24493036 intergenic CG13589 -,CG13590 - chr2R 24493142 intergenic CG13590 -,CG13589 - chr2R 24493248 intergenic CG13590 -,CG13589 - chr2R_22_24490001 chr2R_24490001 RAL-900_125b 1577 chr2R 24542552 24542622 chr2R 24542698 24542768 30 146 7.0 10.0 8.5 3.2 216 chr2R 24542552 intron,intron CG4622 -,ITP + chr2R 24542660 intron,intron CG4622 -,ITP + chr2R 24542768 intron,intron CG4622 -,ITP + chr2R_30_24540001 chr2R_24540001 RAL-900_125b 1578 chr2R 24592908 24592977 chr2R 24593050 24593120 34 139 11.0 13.0 12.0 2.6 212 chr2R 24592908 intron pio + chr2R 24593014 intron pio + chr2R 24593120 intron pio + chr2R_34_24590001 chr2R_24590001 RAL-900_125b 1579 chr2R 24647548 24647555 chr2R 24655155 24655162 412 4 7607 26.0 9.0 17.5 0.2 7614 chr2R 24647548 intergenic not near genes chr2R 24651355 intergenic not near genes chr2R 24655162 intergenic not near genes chr2R_4_24650001 chr2R_24650001 RAL-900_125b 1580 chr2R 24647556 24647611 chr2R 24655152 24655218 412 27 7605 11.5 9.0 10.2 2.4 7662 chr2R 24647556 intergenic not near genes chr2R 24651387 intergenic not near genes chr2R 24655218 intergenic not near genes chr2R_27_24650001 chr2R_24650001 RAL-900_125b 1581 chr2R 24727844 24727901 chr2R 24735402 24735459 mdg1 22 7551 11.5 9.0 10.2 2.0 7615 chr2R 24727844 intron Mid1 - chr2R 24731652 intron Mid1 - chr2R 24735459 intron Mid1 - chr2R_22_24730001 chr2R_24730001 RAL-900_125b 1582 chr2R 24737100 24737106 chr2R 24737270 24737276 4 170 24.0 8.0 16.0 0.2 176 chr2R 24737100 intergenic Mid1 - chr2R 24737188 intergenic not near genes chr2R 24737276 intergenic not near genes chr2R_4_24735001 chr2R_24735001 RAL-900_125b 1583 chr2R 24737107 24737174 chr2R 24737268 24737342 32 167 10.5 8.0 9.2 3.1 235 chr2R 24737107 intergenic Mid1 - chr2R 24737224 intergenic not near genes chr2R 24737342 intergenic not near genes chr2R_32_24735001 chr2R_24735001 RAL-900_125b 1584 chr2R 24742072 24742144 chr2R 24742205 24742266 26 132 8.0 9.5 8.8 2.7 194 chr2R 24742072 intergenic not near genes chr2R 24742169 intergenic not near genes chr2R 24742266 intergenic not near genes chr2R_26_24740001 chr2R_24740001 RAL-900_125b 1585 chr2R 24763594 24763634 chr2R 24765586 24765650 G2 13 2017 6.0 4.5 5.2 2.1 2056 chr2R 24763594 exon CG3894 + chr2R 24764622 intron CG3894 + chr2R 24765650 exon CG3894 + chr2R_13_24760001 chr2R_24760001 RAL-900_125b 1586 chr2R 24846432 24846445 chr2R 24846551 24846565 6 124 17.5 11.0 14.2 0.4 133 chr2R 24846432 intergenic not near genes chr2R 24846498 intergenic not near genes chr2R 24846565 intergenic not near genes chr2R_6_24845001 chr2R_24845001 RAL-900_125b 1587 chr2R 24859795 24859868 chr2R 24859931 24859999 24 129 11.0 0.5 5.8 3.5 204 chr2R 24859795 5` UTR CR44829 + chr2R 24859897 5` UTR CR44829 + chr2R 24859999 5` UTR CR44829 + chr2R_24_24855001 chr2R_24855001 RAL-900_125b 1588 chr2R 24884003 24884008 chr2R 24884135 24884140 4 132 21.0 5.5 13.2 0.3 137 chr2R 24884003 intron NKAIN + chr2R 24884072 intron NKAIN + chr2R 24884140 intron NKAIN + chr2R_4_24880001 chr2R_24880001 RAL-900_125b 1589 chr2R 24884011 24884079 chr2R 24884133 24884211 49 131 8.5 5.5 7.0 6.1 200 chr2R 24884011 intron NKAIN + chr2R 24884111 intron NKAIN + chr2R 24884211 intron NKAIN + chr2R_49_24880001 chr2R_24880001 RAL-900_125b 1590 chr2R 25014544 25014572 chr2R 25014649 25014698 5 120 7.5 13.0 10.2 0.4 154 chr2R 25014544 intron uzip + chr2R 25014621 intron uzip + chr2R 25014698 intron uzip + chr2R_5_25010001 chr2R_25010001 RAL-900_125b 1591 chr2R 25018298 25018313 chr2R 25018449 25018450 9 149 15.5 8.0 11.8 0.7 152 chr2R 25018298 intron uzip + chr2R 25018374 intron uzip + chr2R 25018450 intron uzip + chr2R_9_25015001 chr2R_25015001 RAL-900_125b 1592 chr2R 25018315 25018362 chr2R 25018446 25018493 20 148 7.5 7.5 7.5 2.4 178 chr2R 25018315 intron uzip + chr2R 25018404 intron uzip + chr2R 25018493 intron uzip + chr2R_20_25015001 chr2R_25015001 RAL-900_125b 1593 chr2R 25022597 25022669 chr2R 25022731 25022788 28 133 8.5 13.5 11.0 2.3 191 chr2R 25022597 intron uzip + chr2R 25022692 intron uzip + chr2R 25022788 intron uzip + chr2R_28_25020001 chr2R_25020001 RAL-900_125b 1594 chr2R 25061292 25061364 chr2R 25061425 25061457 25 125 6.0 12.5 9.2 2.5 165 chr2R 25061292 intergenic not near genes chr2R 25061374 intergenic not near genes chr2R 25061457 intergenic not near genes chr2R_25_25060001 chr2R_25060001 RAL-900_125b 1595 chr2R 25076181 25076187 chr2R 25076470 25076476 4 289 39.5 23.0 31.2 0.1 295 chr2R 25076181 intron gol - chr2R 25076328 intron gol - chr2R 25076476 intron gol - chr2R_4_25075001 chr2R_25075001 RAL-900_125b 1596 chr2R 25076524 25076530 chr2R 25076654 25076660 5 131 27.0 40.5 33.8 0.1 136 chr2R 25076524 intron gol - chr2R 25076592 intron gol - chr2R 25076660 intron gol - chr2R_5_25075001 chr2R_25075001 RAL-900_125b 1597 chr2R 25081577 25081639 chr2R 25082702 25082755 23 1140 8.0 5.5 6.8 2.9 1178 chr2R 25081577 intron gol - chr2R 25082166 intron gol - chr2R 25082755 intron gol - chr2R_23_25080001 chr2R_25080001 RAL-900_125b 1598 chr2R 25101229 25101299 chr2R 25101381 25101449 38 151 8.5 8.0 8.2 4.1 220 chr2R 25101229 intron lov - chr2R 25101339 intron lov - chr2R 25101449 intron lov - chr2R_38_25100001 chr2R_25100001 RAL-900_125b 1599 chr2R 25130964 25131010 chr2R 25131091 25131137 18 127 16.0 10.0 13.0 1.3 173 chr2R 25130964 intron lov - chr2R 25131050 intron lov - chr2R 25131137 intron lov - chr2R_18_25130001 chr2R_25130001 RAL-900_125b 1600 chr2R 25141611 25141677 chr2R 25159351 25159417 roo 26 17740 9.0 10.5 9.8 2.4 17806 chr2R 25141611 intergenic not near genes chr2R 25150514 intergenic not near genes chr2R 25159417 intergenic not near genes chr2R_26_25150001 chr2R_25150001 RAL-900_125b 1601 chr2R 25167633 25167699 chr2R 25167765 25167831 23 131 4.0 8.0 6.0 3.3 198 chr2R 25167633 intergenic CG34038 + chr2R 25167732 5` UTR CG34038 + chr2R 25167831 5` UTR CG34038 + chr2R_23_25165001 chr2R_25165001 RAL-900_125b 1602 chr3L 86414 86487 chr3L 86543 86616 20 127 9.0 9.5 9.2 2.0 202 chr3L 86414 intergenic not near genes chr3L 86515 intergenic not near genes chr3L 86616 intergenic not near genes chr3L_20_85001 chr3L_85001 RAL-900_125b 1603 chr3L 87013 87084 chr3L 87345 87416 28 331 9.0 7.0 8.0 3.1 403 chr3L 87013 intergenic not near genes chr3L 87214 intergenic not near genes chr3L 87416 intergenic not near genes chr3L_28_85001 chr3L_85001 RAL-900_125b 1604 chr3L 105699 105769 chr3L 105844 105906 30 143 15.0 11.5 13.2 2.1 207 chr3L 105699 intergenic not near genes chr3L 105802 intergenic not near genes chr3L 105906 intergenic not near genes chr3L_30_105001 chr3L_105001 RAL-900_125b 1605 chr3L 108911 108926 chr3L 109040 109055 8 129 25.0 11.0 18.0 0.4 144 chr3L 108911 intergenic not near genes chr3L 108983 intergenic not near genes chr3L 109055 intergenic not near genes chr3L_8_105001 chr3L_105001 RAL-900_125b 1606 chr3L 108927 108974 chr3L 109039 109103 29 126 11.5 11.0 11.2 2.4 176 chr3L 108927 intergenic not near genes chr3L 109015 intergenic not near genes chr3L 109103 intergenic not near genes chr3L_29_105001 chr3L_105001 RAL-900_125b 1607 chr3L 110167 110237 chr3L 119384 119454 roo 27 9216 13.5 9.5 11.5 2.2 9287 chr3L 110167 intergenic not near genes chr3L 114810 intergenic not near genes chr3L 119454 intergenic not near genes chr3L_27_110001 chr3L_110001 RAL-900_125b 1608 chr3L 315623 315688 chr3L 315755 315820 40 130 12.0 8.5 10.2 3.6 197 chr3L 315623 intron fwd - chr3L 315722 intron fwd - chr3L 315820 intron fwd - chr3L_40_315001 chr3L_315001 RAL-900_125b 1609 chr3L 343150 343177 chr3L 343323 343350 14 173 21.0 19.5 20.2 0.7 200 chr3L 343150 intron Ptpmeg + chr3L 343250 intron Ptpmeg + chr3L 343350 intron Ptpmeg + chr3L_14_340001 chr3L_340001 RAL-900_125b 1610 chr3L 365475 365554 chr3L 365611 365699 26 144 1.5 4.0 2.8 6.8 224 chr3L 365475 3` UTR CG1233 + chr3L 365587 3` UTR CG1233 + chr3L 365699 3` UTR CG13884 - chr3L_26_365001 chr3L_365001 RAL-900_125b 1611 chr3L 390907 390929 chr3L 391063 391085 9 155 16.5 5.0 10.8 0.8 178 chr3L 390907 intron trh - chr3L 390996 intron trh - chr3L 391085 intron trh - chr3L_9_390001 chr3L_390001 RAL-900_125b 1612 chr3L 390930 390981 chr3L 391061 391137 28 153 5.0 5.0 5.0 4.7 207 chr3L 390930 intron trh - chr3L 391034 intron trh - chr3L 391137 intron trh - chr3L_28_390001 chr3L_390001 RAL-900_125b 1613 chr3L 402651 402697 chr3L 409753 409800 297 16 7101 11.5 9.5 10.5 1.4 7149 chr3L 402651 intergenic not near genes chr3L 406226 intergenic not near genes chr3L 409800 intergenic not near genes chr3L_16_405001 chr3L_405001 RAL-900_125b 1614 chr3L 402698 402713 chr3L 409750 409804 297 12 7094 9.0 9.0 9.0 1.2 7106 chr3L 402698 intergenic not near genes chr3L 406251 intergenic not near genes chr3L 409804 intergenic not near genes chr3L_12_405001 chr3L_405001 RAL-900_125b 1615 chr3L 416098 416160 chr3L 416223 416224 21 134 10.5 9.0 9.8 1.9 126 chr3L 416098 intergenic not near genes chr3L 416161 intergenic not near genes chr3L 416224 intergenic not near genes chr3L_21_415001 chr3L_415001 RAL-900_125b 1616 chr3L 428139 428221 chr3L 428310 428358 15 151 5.0 0.0 2.5 4.3 219 chr3L 428139 intergenic not near genes chr3L 428248 intergenic not near genes chr3L 428358 intergenic not near genes chr3L_15_425001 chr3L_425001 RAL-900_125b 1617 chr3L 497591 497633 chr3L 497726 497767 12 135 7.0 4.5 5.8 1.8 176 chr3L 497591 intron klar - chr3L 497679 intron klar - chr3L 497767 intron klar - chr3L_12_495001 chr3L_495001 RAL-900_125b 1618 chr3L 506390 506407 chr3L 506537 506554 9 147 10.0 12.5 11.2 0.7 164 chr3L 506390 intron klar - chr3L 506472 intron klar - chr3L 506554 intron klar - chr3L_9_505001 chr3L_505001 RAL-900_125b 1619 chr3L 563929 563994 chr3L 564157 564223 30 227 13.0 11.5 12.2 2.3 294 chr3L 563929 intron hipk + chr3L 564076 intron hipk + chr3L 564223 intron hipk + chr3L_30_560001 chr3L_560001 RAL-900_125b 1620 chr3L 606852 606901 chr3L 606978 607030 12 129 9.5 0.0 4.8 2.1 178 chr3L 606852 intergenic Reg-2 - chr3L 606941 intergenic Reg-2 - chr3L 607030 intergenic Reg-2 - chr3L_12_605001 chr3L_605001 RAL-900_125b 1621 chr3L 642431 642492 chr3L 642572 642633 26 141 11.0 13.5 12.2 2.0 202 chr3L 642431 5` UTR CR43334 + chr3L 642532 5` UTR CR43334 + chr3L 642633 5` UTR CR43334 + chr3L_26_640001 chr3L_640001 RAL-900_125b 1622 chr3L 651345 651411 chr3L 651483 651548 28 138 13.0 13.5 13.2 2.0 203 chr3L 651345 intergenic Gale +,CG3402 - chr3L 651446 intergenic CG3402 -,Gale + chr3L 651548 3` UTR CG3402 - chr3L_28_650001 chr3L_650001 RAL-900_125b 1623 chr3L 705203 705261 chr3L 705329 705387 33 125 12.5 8.5 10.5 2.9 184 chr3L 705203 intergenic CR44514 + chr3L 705295 intergenic CR44514 + chr3L 705387 5` UTR CR44514 + chr3L_33_705001 chr3L_705001 RAL-900_125b 1624 chr3L 705859 705916 chr3L 706005 706062 21 146 16.0 11.5 13.8 1.4 203 chr3L 705859 intergenic CG13895 -,CR44514 + chr3L 705960 3` UTR CG13895 - chr3L 706062 3` UTR CG13895 - chr3L_21_705001 chr3L_705001 RAL-900_125b 1625 chr3L 732771 732846 chr3L 733043 733118 25 271 5.5 11.0 8.2 2.7 347 chr3L 732771 intergenic not near genes chr3L 732944 intergenic not near genes chr3L 733118 intergenic not near genes chr3L_25_730001 chr3L_730001 RAL-900_125b 1626 chr3L 772684 772691 chr3L 772815 772815 4 129 6.0 5.5 5.8 0.6 131 chr3L 772684 intergenic not near genes chr3L 772750 intergenic not near genes chr3L 772815 intergenic not near genes chr3L_4_770001 chr3L_770001 RAL-900_125b 1627 chr3L 789869 789934 chr3L 790397 790461 roo 29 527 1.5 1.0 1.2 13.2 592 chr3L 789869 intergenic not near genes chr3L 790165 intergenic not near genes chr3L 790461 intergenic not near genes chr3L_29_790001 chr3L_790001 RAL-900_125b 1628 chr3L 802565 802566 chr3L 11777678 11777678 7 10975112 24.0 33.0 28.5 0.2 10975113 chr3L 802565 intergenic not near genes chr3L 6290122 intergenic not near genes chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_7_6290001 chr3L_6290001 RAL-900_125b 1629 chr3L 822058 822074 chr3L 822188 822188 10 128 0.0 12.5 6.2 1.4 130 chr3L 822058 intergenic not near genes chr3L 822123 intergenic not near genes chr3L 822188 intergenic not near genes chr3L_10_820001 chr3L_820001 RAL-900_125b 1630 chr3L 843678 843722 chr3L 843809 843849 8 131 16.0 0.5 8.2 0.9 171 chr3L 843678 3` UTR Gr61a + chr3L 843764 intergenic Gr61a +,CG13889 + chr3L 843849 intergenic CG13889 +,Gr61a + chr3L_8_840001 chr3L_840001 RAL-900_125b 1631 chr3L 857968 858030 chr3L 866479 866551 Tirant 17 8518 8.0 6.0 7.0 2.1 8583 chr3L 857968 intergenic not near genes chr3L 862260 intergenic not near genes chr3L 866551 5` UTR CG12502 + chr3L_17_860001 chr3L_860001 RAL-900_125b 1632 chr3L 901378 901414 chr3L 901512 901548 13 133 15.0 12.0 13.5 0.9 170 chr3L 901378 intergenic not near genes chr3L 901463 intergenic not near genes chr3L 901548 intergenic not near genes chr3L_13_900001 chr3L_900001 RAL-900_125b 1633 chr3L 901417 901444 chr3L 901505 901578 12 123 6.0 10.0 8.0 1.3 161 chr3L 901417 intergenic not near genes chr3L 901498 intergenic not near genes chr3L 901578 intergenic not near genes chr3L_12_900001 chr3L_900001 RAL-900_125b 1634 chr3L 906811 906855 chr3L 906912 906981 9 118 10.5 7.0 8.8 0.9 170 chr3L 906811 intergenic not near genes chr3L 906896 intergenic not near genes chr3L 906981 intergenic not near genes chr3L_9_905001 chr3L_905001 RAL-900_125b 1635 chr3L 925130 925199 chr3L 932606 932670 mdg1 28 7475 8.5 8.0 8.2 3.0 7540 chr3L 925130 intron Glut1 + chr3L 928900 intron Glut1 + chr3L 932670 intron Glut1 + chr3L_28_925001 chr3L_925001 RAL-900_125b 1636 chr3L 933858 933937 chr3L 934012 934090 38 151 7.0 7.0 7.0 4.8 232 chr3L 933858 intron Glut1 + chr3L 933974 intron Glut1 + chr3L 934090 intron Glut1 + chr3L_38_930001 chr3L_930001 RAL-900_125b 1637 chr3L 939735 939785 chr3L 940906 940956 jockey 26 1170 7.0 8.0 7.5 3.1 1221 chr3L 939735 intron Glut1 + chr3L 940346 intron Glut1 + chr3L 940956 intron Glut1 + chr3L_26_940001 chr3L_940001 RAL-900_125b 1638 chr3L 947679 947743 chr3L 947813 947877 20 134 3.0 8.5 5.8 2.9 198 chr3L 947679 intron Glut1 + chr3L 947778 intron Glut1 + chr3L 947877 intron Glut1 + chr3L_20_945001 chr3L_945001 RAL-900_125b 1639 chr3L 958269 958346 chr3L 958403 958474 30 133 6.5 10.0 8.2 3.3 205 chr3L 958269 intron Glut1 + chr3L 958372 intron Glut1 + chr3L 958474 intron Glut1 + chr3L_30_955001 chr3L_955001 RAL-900_125b 1640 chr3L 973938 973982 chr3L 974064 974108 20 121 3.5 14.5 9.0 2.0 170 chr3L 973938 intron Glut1 + chr3L 974023 intron Glut1 + chr3L 974108 intron Glut1 + chr3L_20_970001 chr3L_970001 RAL-900_125b 1641 chr3L 1001821 1001874 chr3L 1001949 1001992 15 127 4.5 15.5 10.0 1.4 171 chr3L 1001821 intron trio - chr3L 1001906 intron trio - chr3L 1001992 intron trio - chr3L_15_1000001 chr3L_1000001 RAL-900_125b 1642 chr3L 1015107 1015169 chr3L 1015226 1015266 8 128 1.5 5.0 3.2 1.9 159 chr3L 1015107 intron trio - chr3L 1015186 intron trio - chr3L 1015266 intron trio - chr3L_8_1015001 chr3L_1015001 RAL-900_125b 1643 chr3L 1021546 1021624 chr3L 1021672 1021750 25 119 12.5 12.0 12.2 1.9 204 chr3L 1021546 intron trio - chr3L 1021648 intron trio - chr3L 1021750 intron trio - chr3L_25_1020001 chr3L_1020001 RAL-900_125b 1644 chr3L 1031537 1031602 chr3L 1031662 1031728 27 119 10.5 9.0 9.8 2.5 191 chr3L 1031537 intron trio - chr3L 1031632 intron trio - chr3L 1031728 intron trio - chr3L_27_1030001 chr3L_1030001 RAL-900_125b 1645 chr3L 1033316 1033327 chr3L 1033462 1033473 5 146 0.0 0.0 0.0 5.0 157 chr3L 1033316 intron trio - chr3L 1033394 intron trio - chr3L 1033473 intron trio - chr3L_5_1030001 chr3L_1030001 RAL-900_125b 1646 chr3L 1040504 1040581 chr3L 1040638 1040703 38 134 7.5 4.0 5.8 5.6 199 chr3L 1040504 intron bab1 - chr3L 1040604 intron bab1 - chr3L 1040703 intron bab1 - chr3L_38_1040001 chr3L_1040001 RAL-900_125b 1647 chr3L 1047313 1047361 chr3L 1055178 1055207 412 15 7858 13.5 5.0 9.2 1.5 7894 chr3L 1047313 intron bab1 - chr3L 1051260 intron bab1 - chr3L 1055207 intron bab1 - chr3L_15_1050001 chr3L_1050001 RAL-900_125b 1648 chr3L 1047369 1047385 chr3L 1055177 1055243 412 11 7840 11.0 5.0 8.0 1.2 7874 chr3L 1047369 intron bab1 - chr3L 1051306 intron bab1 - chr3L 1055243 intron bab1 - chr3L_11_1050001 chr3L_1050001 RAL-900_125b 1649 chr3L 1109586 1109660 chr3L 1109724 1109798 29 136 0.0 11.5 5.8 4.3 212 chr3L 1109586 intergenic not near genes chr3L 1109692 intergenic not near genes chr3L 1109798 intergenic not near genes chr3L_29_1105001 chr3L_1105001 RAL-900_125b 1650 chr3L 1145191 1145268 chr3L 1145320 1145400 14 128 3.5 0.0 1.8 5.0 209 chr3L 1145191 intron bab2 - chr3L 1145296 intron bab2 - chr3L 1145400 intron bab2 - chr3L_14_1145001 chr3L_1145001 RAL-900_125b 1651 chr3L 1154083 1154154 chr3L 1163283 1163354 roo 28 9200 13.5 11.0 12.2 2.1 9271 chr3L 1154083 intron bab2 - chr3L 1158718 intron bab2 - chr3L 1163354 intron bab2 - chr3L_28_1155001 chr3L_1155001 RAL-900_125b 1652 chr3L 1166973 1166986 chr3L 1167100 1167113 8 127 12.5 10.5 11.5 0.6 140 chr3L 1166973 intron bab2 - chr3L 1167043 intron bab2 - chr3L 1167113 intron bab2 - chr3L_8_1165001 chr3L_1165001 RAL-900_125b 1653 chr3L 1195354 1195402 chr3L 1195608 1195656 5 254 0.0 0.0 0.0 5.0 302 chr3L 1195354 intergenic LysX - chr3L 1195505 intergenic LysX - chr3L 1195656 intergenic LysX - chr3L_5_1195001 chr3L_1195001 RAL-900_125b 1654 chr3L 1219551 1219569 chr3L 1227334 1227352 412 4 7782 11.5 11.5 11.5 0.3 7801 chr3L 1219551 intron mwh + chr3L 1223452 intron mwh + chr3L 1227352 intron mwh + chr3L_4_1220001 chr3L_1220001 RAL-900_125b 1655 chr3L 1219572 1219625 chr3L 1227333 1227405 412 6 7774 6.5 11.5 9.0 0.6 7833 chr3L 1219572 intron mwh + chr3L 1223488 intron mwh + chr3L 1227405 intron mwh + chr3L_6_1220001 chr3L_1220001 RAL-900_125b 1656 chr3L 1323797 1323866 chr3L 1323936 1324000 17 138 2.5 9.0 5.8 2.5 203 chr3L 1323797 intron,intron Myo61F +,CR45166 - chr3L 1323898 intron,intron Myo61F +,CR45166 - chr3L 1324000 intron,3` UTR Myo61F +,CR45166 - chr3L_17_1320001 chr3L_1320001 RAL-900_125b 1657 chr3L 1324575 1324654 chr3L 1324703 1324782 19 128 11.0 15.0 13.0 1.4 207 chr3L 1324575 intron Myo61F + chr3L 1324678 intron Myo61F + chr3L 1324782 intron Myo61F + chr3L_19_1320001 chr3L_1320001 RAL-900_125b 1658 chr3L 1350893 1350922 chr3L 1351035 1351064 13 142 21.5 19.0 20.2 0.6 171 chr3L 1350893 intron Ptp61F - chr3L 1350978 intron Ptp61F - chr3L 1351064 intron Ptp61F - chr3L_13_1350001 chr3L_1350001 RAL-900_125b 1659 chr3L 1363985 1364064 chr3L 1364121 1364199 17 136 2.0 5.0 3.5 3.8 214 chr3L 1363985 intron Ptp61F - chr3L 1364092 intron Ptp61F - chr3L 1364199 intron Ptp61F - chr3L_17_1360001 chr3L_1360001 RAL-900_125b 1660 chr3L 1371633 1371687 chr3L 1371867 1371915 18 230 5.5 5.5 5.5 2.8 282 chr3L 1371633 intron,intron Ptp61F -,ru + chr3L 1371774 intron,intron Ptp61F -,ru + chr3L 1371915 intron,intron Ptp61F -,ru + chr3L_18_1370001 chr3L_1370001 RAL-900_125b 1661 chr3L 1372318 1372374 chr3L 1372446 1372502 22 128 11.5 11.0 11.2 1.8 184 chr3L 1372318 intron,intron Ptp61F -,ru + chr3L 1372410 intron,intron Ptp61F -,ru + chr3L 1372502 intron,intron Ptp61F -,ru + chr3L_22_1370001 chr3L_1370001 RAL-900_125b 1662 chr3L 1396709 1396746 chr3L 1396839 1396876 17 129 12.0 14.0 13.0 1.2 167 chr3L 1396709 intron Ptp61F - chr3L 1396792 intron Ptp61F - chr3L 1396876 intron Ptp61F - chr3L_17_1395001 chr3L_1395001 RAL-900_125b 1663 chr3L 1410371 1410441 chr3L 1410494 1410541 24 120 12.0 3.5 7.8 2.7 170 chr3L 1410371 intron Ptp61F - chr3L 1410456 intron Ptp61F - chr3L 1410541 intron Ptp61F - chr3L_24_1410001 chr3L_1410001 RAL-900_125b 1664 chr3L 1424755 1424772 chr3L 1430017 1430074 Rt1a 6 5285 0.0 6.0 3.0 1.5 5319 chr3L 1424755 intron Ptp61F - chr3L 1427414 intron Ptp61F - chr3L 1430074 intron Ptp61F - chr3L_6_1425001 chr3L_1425001 RAL-900_125b 1665 chr3L 1463372 1463442 chr3L 1463503 1463547 23 125 1.5 7.0 4.2 4.4 175 chr3L 1463372 intron Ptp61F - chr3L 1463460 intron Ptp61F - chr3L 1463547 intron Ptp61F - chr3L_23_1460001 chr3L_1460001 RAL-900_125b 1666 chr3L 1473199 1473232 chr3L 1473319 1473358 7 125 10.0 17.0 13.5 0.5 159 chr3L 1473199 5` UTR Ptp61F - chr3L 1473278 5` UTR Ptp61F - chr3L 1473358 5` UTR Ptp61F - chr3L_7_1470001 chr3L_1470001 RAL-900_125b 1667 chr3L 1477350 1477422 chr3L 1477490 1477554 6 139 6.5 0.0 3.2 1.4 204 chr3L 1477350 intron stet - chr3L 1477452 intron stet - chr3L 1477554 intron stet - chr3L_6_1475001 chr3L_1475001 RAL-900_125b 1668 chr3L 1485691 1485738 chr3L 1486912 1486959 1360 22 1220 10.0 11.0 10.5 1.9 1268 chr3L 1485691 intron stet - chr3L 1486325 intron stet - chr3L 1486959 intron stet - chr3L_22_1485001 chr3L_1485001 RAL-900_125b 1669 chr3L 1505966 1505985 chr3L 1513607 1513632 17.6 7 7646 12.5 12.0 12.2 0.5 7666 chr3L 1505966 intron,intron Psa +,cue - chr3L 1509799 intron,intron Psa +,cue - chr3L 1513632 intron,intron Psa +,cue - chr3L_7_1505001 chr3L_1505001 RAL-900_125b 1670 chr3L 1505990 1506016 chr3L 1513593 1513663 17.6 13 7642 8.5 9.0 8.8 1.3 7673 chr3L 1505990 intron,intron Psa +,cue - chr3L 1509826 intron,intron Psa +,cue - chr3L 1513663 intron,intron Psa +,cue - chr3L_13_1505001 chr3L_1505001 RAL-900_125b 1671 chr3L 1571432 1571492 chr3L 1571567 1571627 21 135 3.5 10.5 7.0 2.6 195 chr3L 1571432 intron CG12004 + chr3L 1571530 intron CG12004 + chr3L 1571627 intron CG12004 + chr3L_21_1570001 chr3L_1570001 RAL-900_125b 1672 chr3L 1581095 1581178 chr3L 1581482 1581563 26 380 0.0 11.0 5.5 4.0 468 chr3L 1581095 intron CG13917 + chr3L 1581329 intron CG13917 + chr3L 1581563 intron CG13917 + chr3L_26_1580001 chr3L_1580001 RAL-900_125b 1673 chr3L 1585883 1585937 chr3L 1586014 1586068 17 131 8.0 10.5 9.2 1.7 185 chr3L 1585883 intron CG13917 + chr3L 1585976 intron CG13917 + chr3L 1586068 intron CG13917 + chr3L_17_1585001 chr3L_1585001 RAL-900_125b 1674 chr3L 1673551 1673581 chr3L 1673677 1673714 11 129 13.5 10.0 11.8 0.9 163 chr3L 1673551 intergenic not near genes chr3L 1673632 intergenic not near genes chr3L 1673714 intergenic not near genes chr3L_11_1670001 chr3L_1670001 RAL-900_125b 1675 chr3L 1740814 1740847 chr3L 1741104 1741140 pogo 17 291 17.5 17.0 17.2 0.9 326 chr3L 1740814 intron Gk + chr3L 1740977 intron Gk + chr3L 1741140 intron Gk + chr3L_17_1740001 chr3L_1740001 RAL-900_125b 1676 chr3L 1740848 1740879 chr3L 1741098 1741146 pogo 14 284 10.5 14.0 12.2 1.1 298 chr3L 1740848 intron Gk + chr3L 1740997 intron Gk + chr3L 1741146 intron Gk + chr3L_14_1740001 chr3L_1740001 RAL-900_125b 1677 chr3L 1805652 1805711 chr3L 1805871 1805935 36 223 6.0 11.0 8.5 3.8 283 chr3L 1805652 exon CG42676 + chr3L 1805794 intron CG42676 + chr3L 1805935 intron CG42676 + chr3L_36_1805001 chr3L_1805001 RAL-900_125b 1678 chr3L 1817528 1817587 chr3L 1817659 1817722 24 134 9.5 8.0 8.8 2.4 194 chr3L 1817528 intron GV1 + chr3L 1817625 intron GV1 + chr3L 1817722 intron GV1 + chr3L_24_1815001 chr3L_1815001 RAL-900_125b 1679 chr3L 1852996 1853054 chr3L 1853130 1853188 23 134 5.5 6.0 5.8 3.4 192 chr3L 1852996 intron CG13936 - chr3L 1853092 intron CG13936 - chr3L 1853188 intron CG13936 - chr3L_23_1850001 chr3L_1850001 RAL-900_125b 1680 chr3L 1879212 1879250 chr3L 1879344 1879381 19 132 10.0 8.0 9.0 1.9 169 chr3L 1879212 intron CG13937 - chr3L 1879296 intron CG13937 - chr3L 1879381 intron CG13937 - chr3L_19_1875001 chr3L_1875001 RAL-900_125b 1681 chr3L 1882316 1882382 chr3L 1882462 1882526 13 144 4.0 4.0 4.0 2.6 210 chr3L 1882316 intron CG13937 - chr3L 1882421 intron CG13937 - chr3L 1882526 intron CG13937 - chr3L_13_1880001 chr3L_1880001 RAL-900_125b 1682 chr3L 1920721 1920763 chr3L 1920862 1920904 21 141 9.0 13.0 11.0 1.8 183 chr3L 1920721 intergenic not near genes chr3L 1920812 intergenic Dbx + chr3L 1920904 intergenic Dbx + chr3L_21_1920001 chr3L_1920001 RAL-900_125b 1683 chr3L 1922436 1922461 chr3L 1922536 1922576 17 117 7.5 2.0 4.8 2.9 140 chr3L 1922436 intron Dbx + chr3L 1922506 intron Dbx + chr3L 1922576 intron Dbx + chr3L_17_1920001 chr3L_1920001 RAL-900_125b 1684 chr3L 1991073 1991153 chr3L 1991202 1991281 15 129 6.5 6.0 6.2 2.1 208 chr3L 1991073 intergenic not near genes chr3L 1991177 intergenic not near genes chr3L 1991281 intergenic not near genes chr3L_15_1990001 chr3L_1990001 RAL-900_125b 1685 chr3L 2039323 2039403 chr3L 2039464 2039544 23 141 6.0 3.5 4.8 4.0 221 chr3L 2039323 intergenic sls - chr3L 2039434 intergenic sls - chr3L 2039544 intergenic sls - chr3L_23_2035001 chr3L_2035001 RAL-900_125b 1686 chr3L 2108085 2108103 chr3L 2108210 2108238 11 134 0.0 0.0 0.0 11.0 153 chr3L 2108085 intron sls - chr3L 2108162 intron sls - chr3L 2108238 intron sls - chr3L_11_2105001 chr3L_2105001 RAL-900_125b 1687 chr3L 2108198 2108278 chr3L 2113452 2113532 copia 19 5254 0.0 5.5 2.8 5.0 5334 chr3L 2108198 intron sls - chr3L 2110865 intron sls - chr3L 2113532 intron sls - chr3L_19_2110001 chr3L_2110001 RAL-900_125b 1688 chr3L 2139165 2139221 chr3L 2139286 2139352 25 130 9.5 0.0 4.8 4.3 187 chr3L 2139165 intron zormin - chr3L 2139258 intron zormin - chr3L 2139352 intron zormin - chr3L_25_2135001 chr3L_2135001 RAL-900_125b 1689 chr3L 2163918 2164064 chr3L 2164065 2164262 18 169 0.0 0.0 0.0 18.0 344 chr3L 2163918 intergenic CG15822 - chr3L 2164090 intergenic CG15822 - chr3L 2164262 intergenic CG15822 - chr3L_18_2160001 chr3L_2160001 RAL-900_125b 1690 chr3L 2168733 2168801 chr3L 2168874 2168922 30 140 8.5 9.0 8.8 3.1 189 chr3L 2168733 exon CG15879 - chr3L 2168828 intron CG15879 - chr3L 2168922 intron CG15879 - chr3L_30_2165001 chr3L_2165001 RAL-900_125b 1691 chr3L 2199790 2199821 chr3L 2199916 2199947 18 126 7.0 15.5 11.2 1.5 157 chr3L 2199790 intergenic not near genes chr3L 2199868 intergenic not near genes chr3L 2199947 intergenic not near genes chr3L_18_2195001 chr3L_2195001 RAL-900_125b 1692 chr3L 2321117 2321189 chr3L 2321244 2321309 34 125 12.0 11.0 11.5 2.7 192 chr3L 2321117 intergenic not near genes chr3L 2321213 intergenic not near genes chr3L 2321309 intergenic not near genes chr3L_34_2320001 chr3L_2320001 RAL-900_125b 1693 chr3L 2331539 2331607 chr3L 2331666 2331734 38 126 7.5 6.5 7.0 4.8 195 chr3L 2331539 intron MsR1 + chr3L 2331636 intron MsR1 + chr3L 2331734 intron MsR1 + chr3L_38_2330001 chr3L_2330001 RAL-900_125b 1694 chr3L 2355405 2355464 chr3L 2355643 2355702 15 237 4.5 0.0 2.2 4.7 297 chr3L 2355405 intergenic not near genes chr3L 2355554 intergenic not near genes chr3L 2355702 intergenic not near genes chr3L_15_2355001 chr3L_2355001 RAL-900_125b 1695 chr3L 2380302 2380371 chr3L 2380429 2380498 21 127 7.5 12.0 9.8 1.9 196 chr3L 2380302 intergenic not near genes chr3L 2380400 intergenic not near genes chr3L 2380498 intergenic not near genes chr3L_21_2380001 chr3L_2380001 RAL-900_125b 1696 chr3L 2411297 2411343 chr3L 2411424 2411473 24 126 6.5 9.5 8.0 2.7 176 chr3L 2411297 intron CG45186 + chr3L 2411385 intron CG45186 + chr3L 2411473 intron CG45186 + chr3L_24_2410001 chr3L_2410001 RAL-900_125b 1697 chr3L 2447467 2447527 chr3L 2456663 2456718 roo 17 9201 11.5 7.5 9.5 1.6 9251 chr3L 2447467 intron CG45186 + chr3L 2452092 intron CG45186 + chr3L 2456718 intron CG45186 + chr3L_17_2450001 chr3L_2450001 RAL-900_125b 1698 chr3L 2483103 2483169 chr3L 2483232 2483298 20 125 5.0 4.5 4.8 3.4 195 chr3L 2483103 intron CG45186 + chr3L 2483200 intron CG45186 + chr3L 2483298 intron CG45186 + chr3L_20_2480001 chr3L_2480001 RAL-900_125b 1699 chr3L 2490719 2490747 chr3L 2490846 2490874 16 127 0.0 8.0 4.0 3.2 155 chr3L 2490719 intron,intron CG45186 +,CG1146 + chr3L 2490796 intron,intron CG45186 +,CG1146 + chr3L 2490874 intron,intron CG45186 +,CG1146 + chr3L_16_2490001 chr3L_2490001 RAL-900_125b 1700 chr3L 2493773 2493847 chr3L 2493901 2493985 24 136 7.0 0.0 3.5 5.3 212 chr3L 2493773 intron CG45186 + chr3L 2493879 intron CG45186 + chr3L 2493985 intron CG45186 + chr3L_24_2490001 chr3L_2490001 RAL-900_125b 1701 chr3L 2546711 2546794 chr3L 2546850 2546933 13 138 7.5 2.0 4.8 2.2 222 chr3L 2546711 intron Spn - chr3L 2546822 intron Spn - chr3L 2546933 intron Spn - chr3L_13_2545001 chr3L_2545001 RAL-900_125b 1702 chr3L 2575970 2575988 chr3L 2576103 2576121 8 133 12.0 11.5 11.8 0.6 151 chr3L 2575970 intron msn - chr3L 2576046 intron msn - chr3L 2576121 intron msn - chr3L_8_2575001 chr3L_2575001 RAL-900_125b 1703 chr3L 2609629 2609652 chr3L 2609755 2609778 14 125 18.0 5.0 11.5 1.1 149 chr3L 2609629 intron Pxn - chr3L 2609704 intron Pxn - chr3L 2609778 intron Pxn - chr3L_14_2605001 chr3L_2605001 RAL-900_125b 1704 chr3L 2683909 2683970 chr3L 2684029 2684096 34 124 11.5 10.5 11.0 2.8 187 chr3L 2683909 intron Fife - chr3L 2684002 intron Fife - chr3L 2684096 intron Fife - chr3L_34_2680001 chr3L_2680001 RAL-900_125b 1705 chr3L 2751414 2751458 chr3L 2755759 2755803 F-element 19 4345 12.0 17.5 14.8 1.2 4389 chr3L 2751414 intron Mrtf - chr3L 2753608 intron Mrtf - chr3L 2755803 intron Mrtf - chr3L_19_2750001 chr3L_2750001 RAL-900_125b 1706 chr3L 2795672 2795743 chr3L 2795846 2795916 15 173 10.0 9.0 9.5 1.4 244 chr3L 2795672 intron CG43444 - chr3L 2795794 intron CG43444 - chr3L 2795916 intron CG43444 - chr3L_15_2795001 chr3L_2795001 RAL-900_125b 1707 chr3L 2799076 2799108 chr3L 2799208 2799240 16 132 6.5 4.5 5.5 2.5 164 chr3L 2799076 intron CG43444 - chr3L 2799158 intron CG43444 - chr3L 2799240 intron CG43444 - chr3L_16_2795001 chr3L_2795001 RAL-900_125b 1708 chr3L 2835835 2835870 chr3L 2835965 2836000 10 127 15.0 12.5 13.8 0.7 165 chr3L 2835835 intron CG43444 - chr3L 2835918 intron CG43444 - chr3L 2836000 intron CG43444 - chr3L_10_2835001 chr3L_2835001 RAL-900_125b 1709 chr3L 2837380 2837390 chr3L 2837624 2837634 4 244 24.5 11.0 17.8 0.2 254 chr3L 2837380 intron CG43444 - chr3L 2837507 intron CG43444 - chr3L 2837634 intron CG43444 - chr3L_4_2835001 chr3L_2835001 RAL-900_125b 1710 chr3L 2847728 2847756 chr3L 2847858 2847865 6 126 11.0 8.5 9.8 0.6 137 chr3L 2847728 intron CG43444 - chr3L 2847796 intron CG43444 - chr3L 2847865 intron CG43444 - chr3L_6_2845001 chr3L_2845001 RAL-900_125b 1711 chr3L 2863750 2863824 chr3L 2863880 2863954 23 130 0.0 1.5 0.8 12.8 204 chr3L 2863750 intron CG43444 - chr3L 2863852 intron CG43444 - chr3L 2863954 intron CG43444 - chr3L_23_2860001 chr3L_2860001 RAL-900_125b 1712 chr3L 2895843 2895893 chr3L 2895977 2896027 16 132 14.5 4.0 9.2 1.6 184 chr3L 2895843 intron Shab + chr3L 2895935 intron Shab + chr3L 2896027 intron Shab + chr3L_16_2895001 chr3L_2895001 RAL-900_125b 1713 chr3L 2908111 2908169 chr3L 2908262 2908320 26 149 12.0 11.0 11.5 2.1 209 chr3L 2908111 intron Shab + chr3L 2908216 intron Shab + chr3L 2908320 intron Shab + chr3L_26_2905001 chr3L_2905001 RAL-900_125b 1714 chr3L 2911736 2911801 chr3L 2911881 2911892 23 141 8.0 10.0 9.0 2.3 156 chr3L 2911736 intron Shab + chr3L 2911814 intron Shab + chr3L 2911892 intron Shab + chr3L_23_2910001 chr3L_2910001 RAL-900_125b 1715 chr3L 2927795 2927865 chr3L 2936122 2936192 Tirant 38 8326 10.5 9.0 9.8 3.5 8397 chr3L 2927795 intron Shab + chr3L 2931994 intron Shab + chr3L 2936192 intron Shab + chr3L_38_2930001 chr3L_2930001 RAL-900_125b 1716 chr3L 2966679 2966724 chr3L 2974154 2974199 mdg1 20 7475 16.0 14.5 15.2 1.2 7520 chr3L 2966679 intergenic not near genes chr3L 2970439 intergenic not near genes chr3L 2974199 intergenic not near genes chr3L_20_2970001 chr3L_2970001 RAL-900_125b 1717 chr3L 2987661 2987687 chr3L 2987793 2987819 10 130 17.0 0.0 8.5 1.1 158 chr3L 2987661 intergenic not near genes chr3L 2987740 intergenic not near genes chr3L 2987819 intergenic not near genes chr3L_10_2985001 chr3L_2985001 RAL-900_125b 1718 chr3L 2987689 2987716 chr3L 2987790 2987817 8 124 10.5 0.0 5.2 1.3 128 chr3L 2987689 intergenic not near genes chr3L 2987753 intergenic not near genes chr3L 2987817 intergenic not near genes chr3L_8_2985001 chr3L_2985001 RAL-900_125b 1719 chr3L 3040283 3040356 chr3L 3042122 3042199 S-element 20 1842 10.5 0.0 5.2 3.2 1916 chr3L 3040283 3` UTR CG2162 + chr3L 3041241 intergenic not near genes chr3L 3042199 intergenic Jafrac2 + chr3L_20_3040001 chr3L_3040001 RAL-900_125b 1720 chr3L 3050846 3050878 chr3L 3050983 3051015 15 136 17.5 5.5 11.5 1.2 169 chr3L 3050846 intron CG32485 + chr3L 3050930 intron CG32485 + chr3L 3051015 exon CG32485 + chr3L_15_3050001 chr3L_3050001 RAL-900_125b 1721 chr3L 3051699 3051750 chr3L 3051991 3052046 pogo 17 291 9.0 5.0 7.0 2.1 347 chr3L 3051699 3` UTR CG32485 + chr3L 3051872 intergenic CG32485 + chr3L 3052046 intergenic CG32485 +,CG1271 + chr3L_17_3050001 chr3L_3050001 RAL-900_125b 1722 chr3L 3061244 3061294 chr3L 3069877 3069907 Tirant 9 8626 8.5 7.5 8.0 1.0 8663 chr3L 3061244 intron CG32486 - chr3L 3065576 intron CG32486 - chr3L 3069907 intron CG32486 - chr3L_9_3065001 chr3L_3065001 RAL-900_125b 1723 chr3L 3061299 3061313 chr3L 3069873 3069926 Tirant 5 8601 5.0 7.5 6.2 0.7 8627 chr3L 3061299 intron CG32486 - chr3L 3065612 intron CG32486 - chr3L 3069926 intron CG32486 - chr3L_5_3065001 chr3L_3065001 RAL-900_125b 1724 chr3L 3134619 3134687 chr3L 3135292 3135329 27 664 6.5 9.5 8.0 3.0 710 chr3L 3134619 intron CG11537 - chr3L 3134974 intron CG11537 - chr3L 3135329 intron CG11537 - chr3L_27_3130001 chr3L_3130001 RAL-900_125b 1725 chr3L 3138931 3139004 chr3L 3139070 3139143 40 137 6.0 14.5 10.2 3.6 212 chr3L 3138931 intron CG11537 - chr3L 3139037 intron CG11537 - chr3L 3139143 intron CG11537 - chr3L_40_3135001 chr3L_3135001 RAL-900_125b 1726 chr3L 3259589 3259597 chr3L 3259734 3259741 4 145 24.0 5.5 14.8 0.3 152 chr3L 3259589 intron ckd + chr3L 3259665 intron ckd + chr3L 3259741 intron ckd + chr3L_4_3255001 chr3L_3255001 RAL-900_125b 1727 chr3L 3259598 3259828 chr3L 3259728 3259978 40 145 5.5 5.5 5.5 6.2 380 chr3L 3259598 intron ckd + chr3L 3259788 intron ckd + chr3L 3259978 intron ckd + chr3L_40_3255001 chr3L_3255001 RAL-900_125b 1728 chr3L 3281414 3281433 chr3L 3281943 3281979 Doc 11 542 17.0 11.5 14.2 0.7 565 chr3L 3281414 intron CG12017 + chr3L 3281696 intron CG12017 + chr3L 3281979 intron CG12017 + chr3L_11_3280001 chr3L_3280001 RAL-900_125b 1729 chr3L 3314093 3314104 chr3L 3314277 3314282 6 183 43.0 17.0 30.0 0.2 189 chr3L 3314093 intergenic ZnT63C +,Drsl2 + chr3L 3314188 intergenic Drsl2 +,ZnT63C + chr3L 3314282 intergenic Drsl2 +,ZnT63C + chr3L_6_3310001 chr3L_3310001 RAL-900_125b 1730 chr3L 3314106 3314117 chr3L 3314273 3314301 13 180 39.5 15.5 27.5 0.5 195 chr3L 3314106 intergenic ZnT63C +,Drsl2 + chr3L 3314204 intergenic Drsl2 +,ZnT63C + chr3L 3314301 intergenic Drsl2 +,ZnT63C + chr3L_13_3310001 chr3L_3310001 RAL-900_125b 1731 chr3L 3314118 3314159 chr3L 3314272 3314343 32 180 18.0 15.5 16.8 1.8 225 chr3L 3314118 intergenic ZnT63C +,Drsl2 + chr3L 3314230 intergenic Drsl2 +,ZnT63C + chr3L 3314343 intergenic Drsl2 +,ZnT63C + chr3L_32_3310001 chr3L_3310001 RAL-900_125b 1732 chr3L 3312273 3312320 chr3L 3315506 3315578 28 3236 48.0 67.0 57.5 0.5 3305 chr3L 3312273 exon ZnT63C + chr3L 3313926 3` UTR ZnT63C + chr3L 3315578 intergenic Drsl4 +,Drsl3 + chr3L_28_3310001 chr3L_3310001 RAL-900_125b 1733 chr3L 3315935 3316003 chr3L 3316086 3316145 20 150 6.5 10.0 8.2 2.2 210 chr3L 3315935 3` UTR Drsl4 + chr3L 3316040 intergenic Drsl4 + chr3L 3316145 intergenic Drsl4 + chr3L_20_3315001 chr3L_3315001 RAL-900_125b 1734 chr3L 3389372 3389425 chr3L 3389491 3389553 15 127 7.5 12.5 10.0 1.4 181 chr3L 3389372 intergenic not near genes chr3L 3389462 intergenic not near genes chr3L 3389553 intergenic not near genes chr3L_15_3385001 chr3L_3385001 RAL-900_125b 1735 chr3L 3449217 3449235 chr3L 3449345 3449363 6 128 8.5 5.0 6.8 0.8 146 chr3L 3449217 intron eIF5B - chr3L 3449290 intron eIF5B - chr3L 3449363 intron eIF5B - chr3L_6_3445001 chr3L_3445001 RAL-900_125b 1736 chr3L 3470123 3470184 chr3L 3470249 3470310 16 126 4.0 9.5 6.8 2.1 187 chr3L 3470123 intron CG14971 - chr3L 3470216 intron CG14971 - chr3L 3470310 intron CG14971 - chr3L_16_3470001 chr3L_3470001 RAL-900_125b 1737 chr3L 3475027 3475053 chr3L 3475522 3475548 jockey 8 494 18.0 8.5 13.2 0.6 521 chr3L 3475027 intron CG42324 + chr3L 3475288 intron CG42324 + chr3L 3475548 intron CG42324 + chr3L_8_3475001 chr3L_3475001 RAL-900_125b 1738 chr3L 3483493 3483566 chr3L 3483750 3483823 42 255 5.5 9.5 7.5 4.9 330 chr3L 3483493 intron CG42324 + chr3L 3483658 intron CG42324 + chr3L 3483823 intron CG42324 + chr3L_42_3480001 chr3L_3480001 RAL-900_125b 1739 chr3L 3484246 3484314 chr3L 3484388 3484456 26 142 9.5 0.5 5.0 4.3 210 chr3L 3484246 intron,exon CG42324 +,CG43074 - chr3L 3484351 intron,exon CG42324 +,CG43074 - chr3L 3484456 intron,intron CG42324 +,CG43074 - chr3L_26_3480001 chr3L_3480001 RAL-900_125b 1740 chr3L 3494147 3494205 chr3L 3494274 3494332 20 127 0.0 4.5 2.2 6.2 185 chr3L 3494147 intron CG42324 + chr3L 3494240 intron CG42324 + chr3L 3494332 intron CG42324 + chr3L_20_3490001 chr3L_3490001 RAL-900_125b 1741 chr3L 3503974 3503990 chr3L 3504132 3504148 11 158 0.0 11.5 5.8 1.6 174 chr3L 3503974 intron CG42324 + chr3L 3504061 intron CG42324 + chr3L 3504148 intron CG42324 + chr3L_11_3500001 chr3L_3500001 RAL-900_125b 1742 chr3L 3548670 3548716 chr3L 3548842 3548888 8 172 7.5 8.5 8.0 0.9 218 chr3L 3548670 intron Eip63E + chr3L 3548779 intron Eip63E + chr3L 3548888 intron Eip63E + chr3L_8_3545001 chr3L_3545001 RAL-900_125b 1743 chr3L 3566356 3566424 chr3L 3566489 3566557 37 133 10.5 10.5 10.5 3.2 201 chr3L 3566356 intron Eip63E + chr3L 3566456 intron Eip63E + chr3L 3566557 intron Eip63E + chr3L_37_3565001 chr3L_3565001 RAL-900_125b 1744 chr3L 3580212 3580292 chr3L 3580541 3580617 27 324 5.0 6.5 5.8 4.0 405 chr3L 3580212 intron Eip63E + chr3L 3580414 intron Eip63E + chr3L 3580617 intron Eip63E + chr3L_27_3580001 chr3L_3580001 RAL-900_125b 1745 chr3L 3601258 3601273 chr3L 3606619 3606634 copia 7 5359 16.0 11.0 13.5 0.5 5376 chr3L 3601258 intron Eip63E + chr3L 3603946 intron Eip63E + chr3L 3606634 intron Eip63E + chr3L_7_3600001 chr3L_3600001 RAL-900_125b 1746 chr3L 3601277 3601320 chr3L 3606613 3606681 copia 20 5358 8.5 10.0 9.2 2.0 5404 chr3L 3601277 intron Eip63E + chr3L 3603979 intron Eip63E + chr3L 3606681 intron Eip63E + chr3L_20_3600001 chr3L_3600001 RAL-900_125b 1747 chr3L 3619357 3619433 chr3L 3619501 3619577 17 144 7.0 9.0 8.0 1.9 220 chr3L 3619357 intergenic not near genes chr3L 3619467 intergenic not near genes chr3L 3619577 intergenic not near genes chr3L_17_3615001 chr3L_3615001 RAL-900_125b 1748 chr3L 3627191 3627255 chr3L 3627346 3627410 33 155 10.5 11.5 11.0 2.8 219 chr3L 3627191 intron dar1 + chr3L 3627300 intron dar1 + chr3L 3627410 intron dar1 + chr3L_33_3625001 chr3L_3625001 RAL-900_125b 1749 chr3L 3670520 3670585 chr3L 3670658 3670723 23 138 11.0 8.0 9.5 2.2 203 chr3L 3670520 intergenic not near genes chr3L 3670622 intergenic not near genes chr3L 3670723 intergenic not near genes chr3L_23_3670001 chr3L_3670001 RAL-900_125b 1750 chr3L 3691255 3691276 chr3L 3691403 3691424 9 148 4.0 0.0 2.0 3.0 169 chr3L 3691255 intergenic not near genes chr3L 3691340 intergenic not near genes chr3L 3691424 intergenic not near genes chr3L_9_3690001 chr3L_3690001 RAL-900_125b 1751 chr3L 3763718 3763741 chr3L 3763847 3763852 7 126 10.5 0.0 5.2 1.1 134 chr3L 3763718 intron CG32264 - chr3L 3763785 intron CG32264 - chr3L 3763852 intron CG32264 - chr3L_7_3760001 chr3L_3760001 RAL-900_125b 1752 chr3L 3766687 3766759 chr3L 3766823 3766841 18 133 6.5 0.0 3.2 4.3 154 chr3L 3766687 intron CG32264 - chr3L 3766764 intron CG32264 - chr3L 3766841 intron CG32264 - chr3L_18_3765001 chr3L_3765001 RAL-900_125b 1753 chr3L 3815004 3815080 chr3L 3815134 3815211 21 131 4.0 7.0 5.5 3.2 207 chr3L 3815004 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815108 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815211 intron,3` UTR Scsalpha +,CR43932 - chr3L_21_3815001 chr3L_3815001 RAL-900_125b 1754 chr3L 3833697 3833770 chr3L 3833988 3834061 pogo 17 291 7.0 9.0 8.0 1.9 364 chr3L 3833697 intron enc + chr3L 3833879 intron enc + chr3L 3834061 intron enc + chr3L_17_3830001 chr3L_3830001 RAL-900_125b 1755 chr3L 3849432 3849476 chr3L 3849560 3849604 17 128 6.0 12.5 9.2 1.7 172 chr3L 3849432 intron Awh + chr3L 3849518 intron Awh + chr3L 3849604 intron Awh + chr3L_17_3845001 chr3L_3845001 RAL-900_125b 1756 chr3L 3864797 3864851 chr3L 3864930 3864984 16 133 4.5 9.5 7.0 2.0 187 chr3L 3864797 intergenic CR45379 - chr3L 3864890 intergenic CR45379 - chr3L 3864984 intergenic not near genes chr3L_16_3860001 chr3L_3860001 RAL-900_125b 1757 chr3L 3877384 3877450 chr3L 3877562 3877628 17 177 4.5 5.0 4.8 2.9 244 chr3L 3877384 intergenic not near genes chr3L 3877506 intergenic not near genes chr3L 3877628 intergenic not near genes chr3L_17_3875001 chr3L_3875001 RAL-900_125b 1758 chr3L 3889106 3889133 chr3L 3889239 3889266 12 133 0.0 8.5 4.2 2.3 160 chr3L 3889106 intergenic not near genes chr3L 3889186 intergenic not near genes chr3L 3889266 intergenic not near genes chr3L_12_3885001 chr3L_3885001 RAL-900_125b 1759 chr3L 3925957 3926043 chr3L 3926098 3926187 22 142 4.5 1.5 3.0 5.5 230 chr3L 3925957 intron Eip63F-1 - chr3L 3926072 intron Eip63F-1 - chr3L 3926187 intron Eip63F-1 - chr3L_22_3925001 chr3L_3925001 RAL-900_125b 1760 chr3L 3935811 3935827 chr3L 3935939 3935955 6 128 0.0 2.0 1.0 3.0 144 chr3L 3935811 5` UTR Eip63F-2 + chr3L 3935883 5` UTR Eip63F-2 + chr3L 3935955 5` UTR Eip63F-2 + chr3L_6_3935001 chr3L_3935001 RAL-900_125b 1761 chr3L 3935829 3935842 chr3L 3935930 3935970 9 125 0.0 2.0 1.0 4.5 141 chr3L 3935829 5` UTR Eip63F-2 + chr3L 3935900 5` UTR Eip63F-2 + chr3L 3935970 5` UTR Eip63F-2 + chr3L_9_3935001 chr3L_3935001 RAL-900_125b 1762 chr3L 3946141 3946218 chr3L 3946268 3946345 32 125 8.5 10.5 9.5 3.0 204 chr3L 3946141 exon CG14982 + chr3L 3946243 3` UTR CG14982 + chr3L 3946345 3` UTR CG14982 + chr3L_32_3945001 chr3L_3945001 RAL-900_125b 1763 chr3L 4050740 4050811 chr3L 4050871 4050930 19 123 8.5 8.0 8.2 2.1 190 chr3L 4050740 intron CG1136 + chr3L 4050835 intron CG1136 + chr3L 4050930 intron CG1136 + chr3L_19_4050001 chr3L_4050001 RAL-900_125b 1764 chr3L 4146772 4146834 chr3L 4146899 4146966 18 131 0.0 6.5 3.2 4.3 194 chr3L 4146772 intergenic not near genes chr3L 4146869 intergenic not near genes chr3L 4146966 intergenic not near genes chr3L_18_4145001 chr3L_4145001 RAL-900_125b 1765 chr3L 4170104 4170165 chr3L 4170231 4170293 19 128 3.5 3.5 3.5 4.2 189 chr3L 4170104 intergenic Ero1L + chr3L 4170198 intergenic Ero1L + chr3L 4170293 intergenic Ero1L + chr3L_19_4170001 chr3L_4170001 RAL-900_125b 1766 chr3L 4195099 4195163 chr3L 4195253 4195312 29 151 11.5 9.0 10.2 2.6 213 chr3L 4195099 exon CG43367 + chr3L 4195206 intron CG43367 + chr3L 4195312 exon CG43367 + chr3L_29_4195001 chr3L_4195001 RAL-900_125b 1767 chr3L 4235615 4235628 chr3L 4235744 4235757 11 129 19.0 0.0 9.5 1.0 142 chr3L 4235615 intron ImpL2 - chr3L 4235686 intron ImpL2 - chr3L 4235757 intron ImpL2 - chr3L_11_4235001 chr3L_4235001 RAL-900_125b 1768 chr3L 4306943 4306984 chr3L 4307086 4307127 11 143 14.5 1.5 8.0 1.2 184 chr3L 4306943 intron dyl - chr3L 4307035 intron dyl - chr3L 4307127 intron dyl - chr3L_11_4305001 chr3L_4305001 RAL-900_125b 1769 chr3L 4328694 4328748 chr3L 4336242 4336295 412 20 7546 4.5 13.5 9.0 2.0 7601 chr3L 4328694 intron Cip4 - chr3L 4332494 intron Cip4 - chr3L 4336295 exon Cip4 - chr3L_20_4330001 chr3L_4330001 RAL-900_125b 1770 chr3L 4341330 4341335 chr3L 21448026 21448026 7 17106694 43.5 37.0 40.2 0.2 17106696 chr3L 4341330 intron Cip4 - chr3L 12894678 3` UTR CG14118 + chr3L 21448026 3` UTR Syx7 + chr3L_7_12890001 chr3L_12890001 RAL-900_125b 1771 chr3L 4343436 4343521 chr3L 4343567 4343668 21 145 3.0 0.0 1.5 8.4 232 chr3L 4343436 intron Cip4 - chr3L 4343552 intron Cip4 - chr3L 4343668 intron Cip4 - chr3L_21_4340001 chr3L_4340001 RAL-900_125b 1772 chr3L 4361015 4361026 chr3L 4362921 4362932 4 1906 0.0 10.5 5.2 0.6 1917 chr3L 4361015 intron Cip4 - chr3L 4361974 intron Cip4 - chr3L 4362932 intron Cip4 - chr3L_4_4360001 chr3L_4360001 RAL-900_125b 1773 chr3L 4364148 4364221 chr3L 4364287 4364360 15 139 8.5 11.5 10.0 1.4 212 chr3L 4364148 intergenic Cip4 -,mRpS6 + chr3L 4364254 intergenic Cip4 -,mRpS6 + chr3L 4364360 intergenic mRpS6 +,Cip4 - chr3L_15_4360001 chr3L_4360001 RAL-900_125b 1774 chr3L 4472628 4472653 chr3L 4472776 4472806 4 150 0.0 10.5 5.2 0.6 178 chr3L 4472628 intergenic CG32248 +,CG11349 + chr3L 4472717 intergenic CG32248 +,CG11349 + chr3L 4472806 intergenic CG11349 +,CG32248 + chr3L_4_4470001 chr3L_4470001 RAL-900_125b 1775 chr3L 4607215 4607290 chr3L 4607356 4607431 28 141 12.5 7.5 10.0 2.5 216 chr3L 4607215 intron Src64B - chr3L 4607323 intron Src64B - chr3L 4607431 intron Src64B - chr3L_28_4605001 chr3L_4605001 RAL-900_125b 1776 chr3L 4837841 4837915 chr3L 4837970 4838039 29 129 13.0 12.0 12.5 2.1 198 chr3L 4837841 3` UTR CG13707 - chr3L 4837940 3` UTR CG13707 - chr3L 4838039 3` UTR CG13707 - chr3L_29_4835001 chr3L_4835001 RAL-900_125b 1777 chr3L 4839057 4839132 chr3L 4839210 4839286 26 153 5.0 0.0 2.5 7.4 229 chr3L 4839057 intron CG13707 - chr3L 4839172 intron CG13707 - chr3L 4839286 intron CG13707 - chr3L_26_4835001 chr3L_4835001 RAL-900_125b 1778 chr3L 4840372 4840375 chr3L 4840507 4840534 7 151 3.0 12.0 7.5 0.8 162 chr3L 4840372 intergenic CG13707 - chr3L 4840453 intergenic CG13707 - chr3L 4840534 intergenic CG13707 - chr3L_7_4840001 chr3L_4840001 RAL-900_125b 1779 chr3L 4840376 4840423 chr3L 4840505 4840581 8 155 1.0 11.5 6.2 1.1 205 chr3L 4840376 intergenic CG13707 - chr3L 4840478 intergenic CG13707 - chr3L 4840581 intergenic CG13707 - chr3L_8_4840001 chr3L_4840001 RAL-900_125b 1780 chr3L 4858267 4858287 chr3L 4858407 4858425 4 139 19.5 10.0 14.8 0.3 158 chr3L 4858267 intergenic not near genes chr3L 4858346 intergenic not near genes chr3L 4858425 intergenic not near genes chr3L_4_4855001 chr3L_4855001 RAL-900_125b 1781 chr3L 4858289 4858337 chr3L 4858398 4858437 24 131 9.0 7.0 8.0 2.7 148 chr3L 4858289 intergenic not near genes chr3L 4858363 intergenic not near genes chr3L 4858437 intergenic not near genes chr3L_24_4855001 chr3L_4855001 RAL-900_125b 1782 chr3L 4901102 4901153 chr3L 4907329 4907393 diver 11 6239 7.0 4.5 5.8 1.6 6291 chr3L 4901102 intergenic CG13704 + chr3L 4904248 intergenic not near genes chr3L 4907393 intergenic not near genes chr3L_11_4900001 chr3L_4900001 RAL-900_125b 1783 chr3L 4907926 4907934 chr3L 4908052 4908060 7 126 11.5 10.5 11.0 0.6 134 chr3L 4907926 intergenic not near genes chr3L 4907993 intergenic not near genes chr3L 4908060 intergenic not near genes chr3L_7_4905001 chr3L_4905001 RAL-900_125b 1784 chr3L 4990698 4990773 chr3L 4990860 4990925 32 162 4.0 7.5 5.8 4.7 227 chr3L 4990698 intron Con - chr3L 4990812 intron Con - chr3L 4990925 intron Con - chr3L_32_4990001 chr3L_4990001 RAL-900_125b 1785 chr3L 5030722 5030764 chr3L 5030848 5030890 4 124 12.0 10.0 11.0 0.3 168 chr3L 5030722 intron Con - chr3L 5030806 intron Con - chr3L 5030890 intron Con - chr3L_4_5030001 chr3L_5030001 RAL-900_125b 1786 chr3L 5034118 5034181 chr3L 5043320 5043383 roo 29 9201 9.5 11.0 10.2 2.6 9265 chr3L 5034118 intron Con - chr3L 5038750 intron Con - chr3L 5043383 intron Con - chr3L_29_5035001 chr3L_5035001 RAL-900_125b 1787 chr3L 5045414 5045475 chr3L 5050245 5050306 Doc 18 4831 9.5 9.5 9.5 1.7 4892 chr3L 5045414 5` UTR Con - chr3L 5047860 intron Con - chr3L 5050306 intron Con - chr3L_18_5045001 chr3L_5045001 RAL-900_125b 1788 chr3L 5066257 5066313 chr3L 5066405 5066462 15 149 7.5 8.0 7.8 1.7 205 chr3L 5066257 intron Con - chr3L 5066360 intron Con - chr3L 5066462 intron Con - chr3L_15_5065001 chr3L_5065001 RAL-900_125b 1789 chr3L 5101155 5101227 chr3L 5101279 5101357 25 129 6.0 5.0 5.5 3.8 202 chr3L 5101155 intergenic not near genes chr3L 5101256 intergenic not near genes chr3L 5101357 intergenic not near genes chr3L_25_5100001 chr3L_5100001 RAL-900_125b 1790 chr3L 5104433 5104505 chr3L 5124617 5124689 35 20184 10.5 9.0 9.8 3.2 20256 chr3L 5104433 intergenic not near genes chr3L 5114561 intergenic not near genes chr3L 5124689 intergenic not near genes chr3L_35_5110001 chr3L_5110001 RAL-900_125b 1791 chr3L 5164598 5164647 chr3L 5164724 5164763 17 125 11.0 10.0 10.5 1.5 165 chr3L 5164598 intron shep - chr3L 5164680 intron shep - chr3L 5164763 intron shep - chr3L_17_5160001 chr3L_5160001 RAL-900_125b 1792 chr3L 5188859 5188925 chr3L 5188983 5189027 22 127 7.0 8.5 7.8 2.5 168 chr3L 5188859 intron shep - chr3L 5188943 intron shep - chr3L 5189027 intron shep - chr3L_22_5185001 chr3L_5185001 RAL-900_125b 1793 chr3L 5222263 5222320 chr3L 5222378 5222441 26 126 11.5 4.5 8.0 2.9 178 chr3L 5222263 intron shep - chr3L 5222352 intron shep - chr3L 5222441 intron shep - chr3L_26_5220001 chr3L_5220001 RAL-900_125b 1794 chr3L 5223370 5223440 chr3L 5223502 5223572 19 126 12.5 6.5 9.5 1.8 202 chr3L 5223370 intron shep - chr3L 5223471 intron shep - chr3L 5223572 intron shep - chr3L_19_5220001 chr3L_5220001 RAL-900_125b 1795 chr3L 5225016 5225062 chr3L 5225178 5225226 8 163 3.5 0.0 1.8 2.9 210 chr3L 5225016 intron shep - chr3L 5225121 intron shep - chr3L 5225226 intron shep - chr3L_8_5225001 chr3L_5225001 RAL-900_125b 1796 chr3L 5251812 5251871 chr3L 5251941 5252000 14 129 0.0 11.0 5.5 2.2 188 chr3L 5251812 intron shep - chr3L 5251906 intron shep - chr3L 5252000 intron shep - chr3L_14_5250001 chr3L_5250001 RAL-900_125b 1797 chr3L 5254273 5254281 chr3L 5254341 5254409 5 115 1.0 8.5 4.8 0.9 136 chr3L 5254273 intron shep - chr3L 5254341 intron shep - chr3L 5254409 intron shep - chr3L_5_5250001 chr3L_5250001 RAL-900_125b 1798 chr3L 5261129 5261182 chr3L 5261255 5261311 7 128 7.0 15.0 11.0 0.6 182 chr3L 5261129 intron shep - chr3L 5261220 intron shep - chr3L 5261311 intron shep - chr3L_7_5260001 chr3L_5260001 RAL-900_125b 1799 chr3L 5271153 5271163 chr3L 5271281 5271291 10 128 0.0 0.0 0.0 10.0 138 chr3L 5271153 intron shep - chr3L 5271222 intron shep - chr3L 5271291 intron shep - chr3L_10_5270001 chr3L_5270001 RAL-900_125b 1800 chr3L 5299111 5299173 chr3L 5306596 5306659 Quasimodo 26 7484 9.0 8.0 8.5 2.7 7548 chr3L 5299111 intergenic not near genes chr3L 5302885 intergenic not near genes chr3L 5306659 intergenic not near genes chr3L_26_5300001 chr3L_5300001 RAL-900_125b 1801 chr3L 5322784 5322809 chr3L 5323287 5323332 12 520 19.0 7.5 13.2 0.8 548 chr3L 5322784 intergenic not near genes chr3L 5323058 intergenic not near genes chr3L 5323332 intergenic not near genes chr3L_12_5320001 chr3L_5320001 RAL-900_125b 1802 chr3L 5322810 5322834 chr3L 5323286 5323342 10 510 8.0 6.5 7.2 1.2 532 chr3L 5322810 intergenic not near genes chr3L 5323076 intergenic not near genes chr3L 5323342 intergenic not near genes chr3L_10_5320001 chr3L_5320001 RAL-900_125b 1803 chr3L 5327413 5327478 chr3L 5327548 5327613 23 135 9.5 8.5 9.0 2.3 200 chr3L 5327413 intergenic not near genes chr3L 5327513 intergenic not near genes chr3L 5327613 intergenic not near genes chr3L_23_5325001 chr3L_5325001 RAL-900_125b 1804 chr3L 5375988 5376044 chr3L 5376117 5376173 19 129 5.5 4.0 4.8 3.3 185 chr3L 5375988 intergenic not near genes chr3L 5376080 intergenic not near genes chr3L 5376173 intergenic not near genes chr3L_19_5375001 chr3L_5375001 RAL-900_125b 1805 chr3L 5485001 5485071 chr3L 5485133 5485203 24 132 8.5 8.5 8.5 2.5 202 chr3L 5485001 intergenic not near genes chr3L 5485102 intergenic not near genes chr3L 5485203 intergenic not near genes chr3L_24_5485001 chr3L_5485001 RAL-900_125b 1806 chr3L 5498352 5498373 chr3L 5498485 5498512 8 138 9.0 7.5 8.2 0.9 160 chr3L 5498352 exon blanks - chr3L 5498432 exon blanks - chr3L 5498512 exon blanks - chr3L_8_5495001 chr3L_5495001 RAL-900_125b 1807 chr3L 5498374 5498423 chr3L 5498482 5498550 9 127 1.0 7.0 4.0 1.8 176 chr3L 5498374 exon blanks - chr3L 5498462 exon blanks - chr3L 5498550 exon blanks - chr3L_9_5495001 chr3L_5495001 RAL-900_125b 1808 chr3L 5516373 5516381 chr3L 5516518 5516524 4 144 18.5 10.0 14.2 0.3 151 chr3L 5516373 intron Lkr - chr3L 5516448 intron Lkr - chr3L 5516524 intron Lkr - chr3L_4_5515001 chr3L_5515001 RAL-900_125b 1809 chr3L 5516385 5516441 chr3L 5516510 5516559 22 139 3.5 9.5 6.5 2.9 174 chr3L 5516385 intron Lkr - chr3L 5516472 intron Lkr - chr3L 5516559 intron Lkr - chr3L_22_5515001 chr3L_5515001 RAL-900_125b 1810 chr3L 5517300 5517370 chr3L 5517459 5517531 10 158 9.5 6.5 8.0 1.1 231 chr3L 5517300 intron Lkr - chr3L 5517416 intron Lkr - chr3L 5517531 intron Lkr - chr3L_10_5515001 chr3L_5515001 RAL-900_125b 1811 chr3L 5537677 5537743 chr3L 5538069 5538135 jockey 28 391 12.0 11.0 11.5 2.2 458 chr3L 5537677 intergenic not near genes chr3L 5537906 intergenic not near genes chr3L 5538135 intergenic CG10625 - chr3L_28_5535001 chr3L_5535001 RAL-900_125b 1812 chr3L 5572135 5572140 chr3L 5572266 5572267 5 133 22.0 21.5 21.8 0.2 132 chr3L 5572135 intron Msr-110 - chr3L 5572201 intron Msr-110 - chr3L 5572267 intron Msr-110 - chr3L_5_5570001 chr3L_5570001 RAL-900_125b 1813 chr3L 5572141 5572158 chr3L 5572248 5572300 6 119 12.5 16.5 14.5 0.4 159 chr3L 5572141 intron Msr-110 - chr3L 5572220 intron Msr-110 - chr3L 5572300 intron Msr-110 - chr3L_6_5570001 chr3L_5570001 RAL-900_125b 1814 chr3L 5597764 5597830 chr3L 5597907 5597954 23 130 7.5 0.0 3.8 4.8 190 chr3L 5597764 intergenic CG5150 + chr3L 5597859 intergenic CG5150 + chr3L 5597954 intergenic not near genes chr3L_23_5595001 chr3L_5595001 RAL-900_125b 1815 chr3L 5622432 5622453 chr3L 5622562 5622572 8 129 8.0 8.0 8.0 0.9 140 chr3L 5622432 intergenic not near genes chr3L 5622502 intergenic not near genes chr3L 5622572 intergenic not near genes chr3L_8_5620001 chr3L_5620001 RAL-900_125b 1816 chr3L 5666266 5666318 chr3L 5666400 5666452 11 133 0.0 10.5 5.2 1.8 186 chr3L 5666266 intron sif + chr3L 5666359 intron sif + chr3L 5666452 intron sif + chr3L_11_5665001 chr3L_5665001 RAL-900_125b 1817 chr3L 5667580 5667654 chr3L 5667710 5667784 15 130 3.5 6.0 4.8 2.6 204 chr3L 5667580 intron sif + chr3L 5667682 intron sif + chr3L 5667784 intron sif + chr3L_15_5665001 chr3L_5665001 RAL-900_125b 1818 chr3L 5788662 5788731 chr3L 5788793 5788856 32 127 7.5 11.5 9.5 3.0 194 chr3L 5788662 intergenic not near genes chr3L 5788759 intergenic not near genes chr3L 5788856 intergenic not near genes chr3L_32_5785001 chr3L_5785001 RAL-900_125b 1819 chr3L 5909988 5910056 chr3L 5910279 5910347 pogo 30 291 7.5 10.5 9.0 3.0 359 chr3L 5909988 intron CG13288 + chr3L 5910168 intron CG13288 + chr3L 5910347 intron CG13288 + chr3L_30_5910001 chr3L_5910001 RAL-900_125b 1820 chr3L 5926284 5926295 chr3L 5926518 5926535 7 238 18.5 9.5 14.0 0.5 251 chr3L 5926284 intron Vap-33B + chr3L 5926410 intron Vap-33B + chr3L 5926535 intron Vap-33B + chr3L_7_5925001 chr3L_5925001 RAL-900_125b 1821 chr3L 5926297 5926348 chr3L 5926511 5926590 BS 10 233 9.5 8.0 8.8 1.0 293 chr3L 5926297 intron Vap-33B + chr3L 5926444 intron Vap-33B + chr3L 5926590 intron Vap-33B + chr3L_10_5925001 chr3L_5925001 RAL-900_125b 1822 chr3L 5983879 5983957 chr3L 5984048 5984126 28 169 7.0 5.5 6.2 3.9 247 chr3L 5983879 intergenic CR45439 -,CR45440 - chr3L 5984002 intergenic CR45440 -,CR45439 - chr3L 5984126 3` UTR CR45440 - chr3L_28_5980001 chr3L_5980001 RAL-900_125b 1823 chr3L 6001638 6001677 chr3L 6004388 6004427 jockey 10 2750 13.0 1.0 7.0 1.2 2789 chr3L 6001638 intron PVRAP + chr3L 6003032 intron PVRAP + chr3L 6004427 intron PVRAP + chr3L_10_6000001 chr3L_6000001 RAL-900_125b 1824 chr3L 6001682 6001711 chr3L 6004377 6004461 jockey 11 2745 9.5 0.5 5.0 1.8 2779 chr3L 6001682 intron PVRAP + chr3L 6003072 intron PVRAP + chr3L 6004461 intron PVRAP + chr3L_11_6000001 chr3L_6000001 RAL-900_125b 1825 chr3L 6040315 6040380 chr3L 6042721 6042786 Doc 26 2405 11.0 5.0 8.0 2.9 2471 chr3L 6040315 intergenic Jon65Aiv + chr3L 6041550 intergenic not near genes chr3L 6042786 intergenic not near genes chr3L_26_6040001 chr3L_6040001 RAL-900_125b 1826 chr3L 6052086 6052146 chr3L 6052222 6052282 11 133 4.5 9.5 7.0 1.4 196 chr3L 6052086 intergenic Jon65Aii +,Jon65Aiii + chr3L 6052184 intergenic Jon65Aii +,Jon65Aiii + chr3L 6052282 intergenic Jon65Aii + chr3L_11_6050001 chr3L_6050001 RAL-900_125b 1827 chr3L 6052629 6052644 chr3L 6052749 6052778 7 128 7.0 12.5 9.8 0.6 149 chr3L 6052629 exon Jon65Aii + chr3L 6052704 intron Jon65Aii + chr3L 6052778 exon Jon65Aii + chr3L_7_6050001 chr3L_6050001 RAL-900_125b 1828 chr3L 6052647 6052657 chr3L 6052745 6052792 6 111 6.0 12.0 9.0 0.6 145 chr3L 6052647 exon Jon65Aii + chr3L 6052720 intron Jon65Aii + chr3L 6052792 exon Jon65Aii + chr3L_6_6050001 chr3L_6050001 RAL-900_125b 1829 chr3L 6064964 6065045 chr3L 6065091 6065171 24 127 8.5 6.0 7.2 2.9 207 chr3L 6064964 intergenic not near genes chr3L 6065068 intergenic not near genes chr3L 6065171 intergenic not near genes chr3L_24_6065001 chr3L_6065001 RAL-900_125b 1830 chr3L 6116657 6116725 chr3L 6116780 6116859 24 134 6.5 6.5 6.5 3.2 202 chr3L 6116657 intron Ets65A + chr3L 6116758 intron Ets65A + chr3L 6116859 intron Ets65A + chr3L_24_6115001 chr3L_6115001 RAL-900_125b 1831 chr3L 6119095 6119126 chr3L 6119222 6119253 10 127 13.5 0.0 6.8 1.3 158 chr3L 6119095 exon Ets65A + chr3L 6119174 intron Ets65A + chr3L 6119253 intron Ets65A + chr3L_10_6115001 chr3L_6115001 RAL-900_125b 1832 chr3L 6155668 6155709 chr3L 6155804 6155845 28 136 9.0 0.0 4.5 5.1 177 chr3L 6155668 intergenic CR45421 - chr3L 6155756 intergenic not near genes chr3L 6155845 intergenic not near genes chr3L_28_6155001 chr3L_6155001 RAL-900_125b 1833 chr3L 6159823 6159891 chr3L 6159963 6160031 33 138 8.0 9.0 8.5 3.5 208 chr3L 6159823 intergenic not near genes chr3L 6159927 intergenic not near genes chr3L 6160031 intergenic not near genes chr3L_33_6155001 chr3L_6155001 RAL-900_125b 1834 chr3L 6169083 6169131 chr3L 6169212 6169260 27 129 20.5 14.5 17.5 1.5 177 chr3L 6169083 3` UTR CG10289 - chr3L 6169172 3` UTR CG10289 - chr3L 6169260 3` UTR CG10289 - chr3L_27_6165001 chr3L_6165001 RAL-900_125b 1835 chr3L 6220872 6220940 chr3L 6230074 6230142 roo 29 9201 7.0 11.0 9.0 2.9 9270 chr3L 6220872 5` UTR pncr008:3L + chr3L 6225507 intergenic not near genes chr3L 6230142 intergenic not near genes chr3L_29_6225001 chr3L_6225001 RAL-900_125b 1836 chr3L 6253360 6253373 chr3L 6253491 6253504 6 131 9.5 10.0 9.8 0.6 144 chr3L 6253360 intron Best2 - chr3L 6253432 intron Best2 - chr3L 6253504 exon Best2 - chr3L_6_6250001 chr3L_6250001 RAL-900_125b 1837 chr3L 6272683 6272749 chr3L 6273978 6274044 39 1292 7.5 10.5 9.0 3.9 1361 chr3L 6272683 intergenic not near genes chr3L 6273364 intergenic not near genes chr3L 6274044 intergenic not near genes chr3L_39_6270001 chr3L_6270001 RAL-900_125b 1838 chr3L 6294199 6294268 chr3L 6297466 6297539 23 3257 4.0 6.5 5.2 3.7 3340 chr3L 6294199 intergenic not near genes chr3L 6295869 intergenic not near genes chr3L 6297539 intergenic not near genes chr3L_23_6295001 chr3L_6295001 RAL-900_125b 1839 chr3L 6334966 6335031 chr3L 6335487 6335552 297 29 520 10.5 7.0 8.8 3.0 586 chr3L 6334966 intron CG13300 - chr3L 6335259 intron CG13300 - chr3L 6335552 intron CG13300 - chr3L_29_6335001 chr3L_6335001 RAL-900_125b 1840 chr3L 6362335 6362409 chr3L 6362462 6362536 23 127 4.5 5.0 4.8 4.0 201 chr3L 6362335 intergenic not near genes chr3L 6362436 intergenic not near genes chr3L 6362536 intergenic not near genes chr3L_23_6360001 chr3L_6360001 RAL-900_125b 1841 chr3L 6405619 6405676 chr3L 6432133 6432190 roo 18 26514 11.0 10.0 10.5 1.6 26571 chr3L 6405619 intron CG42747 + chr3L 6418904 intron CG42747 + chr3L 6432190 intron CG42747 + chr3L_18_6415001 chr3L_6415001 RAL-900_125b 1842 chr3L 6444542 6444549 chr3L 6444679 6444681 4 136 25.0 12.5 18.8 0.2 139 chr3L 6444542 intron CG42747 + chr3L 6444612 intron CG42747 + chr3L 6444681 intron CG42747 + chr3L_4_6440001 chr3L_6440001 RAL-900_125b 1843 chr3L 6444550 6444608 chr3L 6444676 6444745 28 133 12.0 12.0 12.0 2.2 195 chr3L 6444550 intron CG42747 + chr3L 6444648 intron CG42747 + chr3L 6444745 intron CG42747 + chr3L_28_6440001 chr3L_6440001 RAL-900_125b 1844 chr3L 6456305 6456318 chr3L 6456439 6456452 5 134 9.0 22.5 15.8 0.3 147 chr3L 6456305 intron CG42747 + chr3L 6456378 intron CG42747 + chr3L 6456452 intron CG42747 + chr3L_5_6455001 chr3L_6455001 RAL-900_125b 1845 chr3L 6507625 6507687 chr3L 6507956 6508015 15 331 2.0 9.0 5.5 2.3 390 chr3L 6507625 intron sfl + chr3L 6507820 intron sfl + chr3L 6508015 intron sfl + chr3L_15_6505001 chr3L_6505001 RAL-900_125b 1846 chr3L 6582415 6582486 chr3L 6582566 6582638 14 151 7.5 8.5 8.0 1.6 223 chr3L 6582415 intron,intron CG18769 +,jv - chr3L 6582526 intron,intron CG18769 +,jv - chr3L 6582638 intron,intron CG18769 +,jv - chr3L_14_6580001 chr3L_6580001 RAL-900_125b 1847 chr3L 6620564 6620600 chr3L 6621054 6621090 Rt1c 21 488 7.0 13.0 10.0 1.9 526 chr3L 6620564 intergenic not near genes chr3L 6620827 intergenic not near genes chr3L 6621090 intergenic not near genes chr3L_21_6620001 chr3L_6620001 RAL-900_125b 1848 chr3L 6621691 6621746 chr3L 6621919 6621966 20 232 8.0 12.0 10.0 1.8 275 chr3L 6621691 intergenic not near genes chr3L 6621828 intergenic not near genes chr3L 6621966 intergenic not near genes chr3L_20_6620001 chr3L_6620001 RAL-900_125b 1849 chr3L 6632383 6632441 chr3L 6632520 6632578 35 137 8.0 16.0 12.0 2.7 195 chr3L 6632383 intron GluRIA + chr3L 6632480 intron GluRIA + chr3L 6632578 intron GluRIA + chr3L_35_6630001 chr3L_6630001 RAL-900_125b 1850 chr3L 6726806 6726823 chr3L 6726932 6726949 9 125 0.0 6.0 3.0 2.2 143 chr3L 6726806 intergenic not near genes chr3L 6726878 intergenic not near genes chr3L 6726949 intergenic not near genes chr3L_9_6725001 chr3L_6725001 RAL-900_125b 1851 chr3L 6742927 6742963 chr3L 6743023 6743089 11 117 5.5 7.5 6.5 1.5 162 chr3L 6742927 intron dikar - chr3L 6743008 intron dikar - chr3L 6743089 5` UTR dikar - chr3L_11_6740001 chr3L_6740001 RAL-900_125b 1852 chr3L 6781080 6781139 chr3L 6783143 6783202 Doc 29 2063 10.5 9.0 9.8 2.7 2122 chr3L 6781080 intergenic not near genes chr3L 6782141 intergenic not near genes chr3L 6783202 intergenic not near genes chr3L_29_6780001 chr3L_6780001 RAL-900_125b 1853 chr3L 6820598 6820630 chr3L 6820731 6820763 16 133 12.0 17.0 14.5 1.0 165 chr3L 6820598 intergenic not near genes chr3L 6820680 intergenic not near genes chr3L 6820763 intergenic not near genes chr3L_16_6820001 chr3L_6820001 RAL-900_125b 1854 chr3L 6855881 6855949 chr3L 6860715 6860758 Doc 22 4831 3.5 10.0 6.8 2.8 4877 chr3L 6855881 intergenic not near genes chr3L 6858320 intergenic not near genes chr3L 6860758 intergenic not near genes chr3L_22_6855001 chr3L_6855001 RAL-900_125b 1855 chr3L 6875204 6875238 chr3L 6875331 6875340 10 124 7.5 4.0 5.8 1.5 136 chr3L 6875204 intergenic not near genes chr3L 6875272 intergenic not near genes chr3L 6875340 intergenic not near genes chr3L_10_6875001 chr3L_6875001 RAL-900_125b 1856 chr3L 6887474 6887537 chr3L 6895016 6895079 roo 48 7541 9.5 8.5 9.0 4.8 7605 chr3L 6887474 intergenic not near genes chr3L 6891276 intergenic not near genes chr3L 6895079 intergenic not near genes chr3L_48_6890001 chr3L_6890001 RAL-900_125b 1857 chr3L 6934299 6934354 chr3L 6934460 6934515 25 161 9.5 8.0 8.8 2.6 216 chr3L 6934299 exon CG14820 + chr3L 6934407 intron CG14820 + chr3L 6934515 exon CG14820 + chr3L_25_6930001 chr3L_6930001 RAL-900_125b 1858 chr3L 6955742 6955812 chr3L 6955872 6955939 33 129 13.0 10.5 11.8 2.6 197 chr3L 6955742 intron CG10077 - chr3L 6955840 5` UTR CG10077 - chr3L 6955939 intergenic CG10077 -,CG9948 + chr3L_33_6955001 chr3L_6955001 RAL-900_125b 1859 chr3L 6974441 6974520 chr3L 6974592 6974671 20 148 4.5 7.5 6.0 2.9 230 chr3L 6974441 exon Galphai - chr3L 6974556 intron Galphai - chr3L 6974671 intron Galphai - chr3L_20_6970001 chr3L_6970001 RAL-900_125b 1860 chr3L 6981902 6981938 chr3L 6982106 6982142 17 202 3.0 4.0 3.5 3.8 240 chr3L 6981902 intergenic not near genes chr3L 6982022 intergenic not near genes chr3L 6982142 intergenic not near genes chr3L_17_6980001 chr3L_6980001 RAL-900_125b 1861 chr3L 6994846 6994906 chr3L 6995497 6995567 BS 20 659 1.5 5.5 3.5 4.4 721 chr3L 6994846 intergenic bin + chr3L 6995206 intergenic not near genes chr3L 6995567 intergenic not near genes chr3L_20_6995001 chr3L_6995001 RAL-900_125b 1862 chr3L 7022014 7022050 chr3L 7022257 7022308 15 255 0.0 11.5 5.8 2.2 294 chr3L 7022014 intron Mp + chr3L 7022161 intron Mp + chr3L 7022308 intron Mp + chr3L_15_7020001 chr3L_7020001 RAL-900_125b 1863 chr3L 7033009 7033080 chr3L 7033157 7033172 14 134 6.0 7.5 6.8 1.8 163 chr3L 7033009 intron Mp + chr3L 7033090 intron Mp + chr3L 7033172 intron Mp + chr3L_14_7030001 chr3L_7030001 RAL-900_125b 1864 chr3L 7041872 7041924 chr3L 7042000 7042050 22 127 7.0 6.5 6.8 2.8 178 chr3L 7041872 intron Mp + chr3L 7041961 intron Mp + chr3L 7042050 intron Mp + chr3L_22_7040001 chr3L_7040001 RAL-900_125b 1865 chr3L 7057692 7057752 chr3L 7058546 7058605 20 853 10.0 1.0 5.5 3.1 913 chr3L 7057692 intergenic not near genes chr3L 7058148 intergenic not near genes chr3L 7058605 intergenic CG8641 - chr3L_20_7055001 chr3L_7055001 RAL-900_125b 1866 chr3L 7065520 7065581 chr3L 7065709 7065770 11 186 4.0 0.0 2.0 3.7 250 chr3L 7065520 intron CG8641 - chr3L 7065645 intron CG8641 - chr3L 7065770 intron CG8641 - chr3L_11_7065001 chr3L_7065001 RAL-900_125b 1867 chr3L 7079564 7079633 chr3L 7079691 7079760 21 127 9.5 10.0 9.8 1.9 196 chr3L 7079564 intergenic not near genes chr3L 7079662 intergenic not near genes chr3L 7079760 intergenic not near genes chr3L_21_7075001 chr3L_7075001 RAL-900_125b 1868 chr3L 7187393 7187422 chr3L 7187503 7187554 5 128 0.0 0.0 0.0 5.0 161 chr3L 7187393 intron Dscam2 - chr3L 7187474 intron Dscam2 - chr3L 7187554 intron Dscam2 - chr3L_5_7185001 chr3L_7185001 RAL-900_125b 1869 chr3L 7197631 7197694 chr3L 7197922 7197959 25 300 6.0 6.0 6.0 3.6 328 chr3L 7197631 intergenic not near genes chr3L 7197795 intergenic not near genes chr3L 7197959 intergenic not near genes chr3L_25_7195001 chr3L_7195001 RAL-900_125b 1870 chr3L 7244890 7244962 chr3L 7245032 7245057 20 134 7.5 8.5 8.0 2.2 167 chr3L 7244890 exon mei-P22 + chr3L 7244974 exon mei-P22 + chr3L 7245057 exon mei-P22 + chr3L_20_7240001 chr3L_7240001 RAL-900_125b 1871 chr3L 7272284 7272364 chr3L 7272419 7272470 20 131 0.5 6.5 3.5 4.4 186 chr3L 7272284 intron unc-13-4A - chr3L 7272377 intron unc-13-4A - chr3L 7272470 intron unc-13-4A - chr3L_20_7270001 chr3L_7270001 RAL-900_125b 1872 chr3L 7274677 7274739 chr3L 7274831 7274882 19 152 5.0 9.0 7.0 2.4 205 chr3L 7274677 intron unc-13-4A - chr3L 7274780 intron unc-13-4A - chr3L 7274882 intron unc-13-4A - chr3L_19_7270001 chr3L_7270001 RAL-900_125b 1873 chr3L 7276085 7276172 chr3L 7276213 7276299 18 127 5.5 2.5 4.0 3.6 214 chr3L 7276085 intron unc-13-4A - chr3L 7276192 intron unc-13-4A - chr3L 7276299 intron unc-13-4A - chr3L_18_7275001 chr3L_7275001 RAL-900_125b 1874 chr3L 7285401 7285459 chr3L 7285528 7285587 25 128 3.5 10.5 7.0 3.1 186 chr3L 7285401 intron unc-13-4A - chr3L 7285494 intron unc-13-4A - chr3L 7285587 intron unc-13-4A - chr3L_25_7285001 chr3L_7285001 RAL-900_125b 1875 chr3L 7376496 7376529 chr3L 7376631 7376664 8 135 19.5 4.5 12.0 0.6 168 chr3L 7376496 intron SMSr - chr3L 7376580 intron SMSr - chr3L 7376664 intron SMSr - chr3L_8_7375001 chr3L_7375001 RAL-900_125b 1876 chr3L 7377270 7377341 chr3L 7380425 7380496 297 36 3153 11.0 8.5 9.8 3.3 3226 chr3L 7377270 intron SMSr - chr3L 7378883 intron SMSr - chr3L 7380496 intron SMSr - chr3L_36_7375001 chr3L_7375001 RAL-900_125b 1877 chr3L 7449426 7449442 chr3L 7449556 7449572 8 130 0.0 4.0 2.0 2.7 146 chr3L 7449426 intron CG42458 + chr3L 7449499 intron CG42458 + chr3L 7449572 intron CG42458 + chr3L_8_7445001 chr3L_7445001 RAL-900_125b 1878 chr3L 7449445 7449456 chr3L 7449549 7449586 6 126 0.5 4.0 2.2 1.9 141 chr3L 7449445 intron CG42458 + chr3L 7449516 intron CG42458 + chr3L 7449586 intron CG42458 + chr3L_6_7445001 chr3L_7445001 RAL-900_125b 1879 chr3L 7479249 7479258 chr3L 7479379 7479388 6 130 15.5 0.0 7.8 0.7 139 chr3L 7479249 intergenic not near genes chr3L 7479318 intergenic not near genes chr3L 7479388 intergenic not near genes chr3L_6_7475001 chr3L_7475001 RAL-900_125b 1880 chr3L 7486657 7486686 chr3L 7486787 7486816 7 130 9.0 20.5 14.8 0.4 159 chr3L 7486657 exon mthl6 + chr3L 7486736 exon mthl6 + chr3L 7486816 exon mthl6 + chr3L_7_7485001 chr3L_7485001 RAL-900_125b 1881 chr3L 7498674 7498677 chr3L 7503530 7503533 F-element 4 4856 13.5 6.5 10.0 0.4 4859 chr3L 7498674 5` UTR CG8539 - chr3L 7501104 intergenic not near genes chr3L 7503533 intergenic not near genes chr3L_4_7500001 chr3L_7500001 RAL-900_125b 1882 chr3L 7498678 7498743 chr3L 7503528 7503599 F-element 28 4854 5.0 6.5 5.8 4.1 4921 chr3L 7498678 5` UTR CG8539 - chr3L 7501138 intergenic not near genes chr3L 7503599 intergenic not near genes chr3L_28_7500001 chr3L_7500001 RAL-900_125b 1883 chr3L 7505368 7505413 chr3L 7505494 7505539 11 126 16.5 11.0 13.8 0.7 171 chr3L 7505368 intergenic CG7548 - chr3L 7505454 intergenic CG7548 - chr3L 7505539 3` UTR CG7548 - chr3L_11_7505001 chr3L_7505001 RAL-900_125b 1884 chr3L 7524103 7524174 chr3L 7524230 7524306 21 131 10.0 0.0 5.0 3.5 203 chr3L 7524103 intron ltl + chr3L 7524204 intron ltl + chr3L 7524306 intron ltl + chr3L_21_7520001 chr3L_7520001 RAL-900_125b 1885 chr3L 7574796 7574860 chr3L 7574936 7574987 11 138 0.0 1.0 0.5 7.3 191 chr3L 7574796 intergenic not near genes chr3L 7574892 intergenic not near genes chr3L 7574987 intergenic not near genes chr3L_11_7570001 chr3L_7570001 RAL-900_125b 1886 chr3L 7617648 7617691 chr3L 7617807 7617850 6 155 9.0 0.0 4.5 1.1 202 chr3L 7617648 intron CG33275 + chr3L 7617749 intron CG33275 + chr3L 7617850 intron CG33275 + chr3L_6_7615001 chr3L_7615001 RAL-900_125b 1887 chr3L 7740852 7740912 chr3L 7740978 7741031 8 121 9.5 13.0 11.2 0.7 179 chr3L 7740852 intron,intron CG32373 +,Snmp2 - chr3L 7740942 intron,intron CG32373 +,Snmp2 - chr3L 7741031 intron,intron CG32373 +,Snmp2 - chr3L_8_7740001 chr3L_7740001 RAL-900_125b 1888 chr3L 7793676 7793735 chr3L 7800778 7800837 297 24 7102 10.0 16.0 13.0 1.7 7161 chr3L 7793676 intron CG32369 - chr3L 7797256 intron CG32369 - chr3L 7800837 intron CG32369 - chr3L_24_7795001 chr3L_7795001 RAL-900_125b 1889 chr3L 7817017 7817055 chr3L 7817200 7817238 25 182 10.0 0.0 5.0 4.2 221 chr3L 7817017 intron Pdp1 - chr3L 7817128 intron Pdp1 - chr3L 7817238 intron Pdp1 - chr3L_25_7815001 chr3L_7815001 RAL-900_125b 1890 chr3L 7843113 7843153 chr3L 7843255 7843295 22 142 8.5 8.0 8.2 2.4 182 chr3L 7843113 intron Pdp1 - chr3L 7843204 intron Pdp1 - chr3L 7843295 intron Pdp1 - chr3L_22_7840001 chr3L_7840001 RAL-900_125b 1891 chr3L 7857350 7857378 chr3L 7857490 7857518 6 140 12.5 19.0 15.8 0.4 168 chr3L 7857350 intron Pdp1 - chr3L 7857434 intron Pdp1 - chr3L 7857518 intron Pdp1 - chr3L_6_7855001 chr3L_7855001 RAL-900_125b 1892 chr3L 7858580 7858645 chr3L 7858732 7858764 38 151 4.5 6.0 5.2 6.1 184 chr3L 7858580 intron Pdp1 - chr3L 7858672 intron Pdp1 - chr3L 7858764 intron Pdp1 - chr3L_38_7855001 chr3L_7855001 RAL-900_125b 1893 chr3L 7869618 7869639 chr3L 7869748 7869761 4 128 21.5 8.0 14.8 0.3 143 chr3L 7869618 exon CG32365 + chr3L 7869690 exon CG32365 + chr3L 7869761 exon CG32365 + chr3L_4_7865001 chr3L_7865001 RAL-900_125b 1894 chr3L 7886478 7886499 chr3L 7889046 7889067 Stalker4 11 2567 10.0 9.0 9.5 1.0 2589 chr3L 7886478 intron CG32365 + chr3L 7887772 intron CG32365 + chr3L 7889067 intron CG32365 + chr3L_11_7885001 chr3L_7885001 RAL-900_125b 1895 chr3L 7886500 7886540 chr3L 7889038 7889108 Stalker4 20 2565 3.5 7.0 5.2 3.2 2608 chr3L 7886500 intron CG32365 + chr3L 7887804 intron CG32365 + chr3L 7889108 intron CG32365 + chr3L_20_7885001 chr3L_7885001 RAL-900_125b 1896 chr3L 7916787 7916848 chr3L 7926008 7926069 roo 26 9221 13.5 13.5 13.5 1.8 9282 chr3L 7916787 3` UTR syd - chr3L 7921428 intron syd - chr3L 7926069 3` UTR syd - chr3L_26_7920001 chr3L_7920001 RAL-900_125b 1897 chr3L 6367042 6367045 chr3L 7946343 7946346 4 1579301 14.5 36.5 25.5 0.2 1579304 chr3L 6367042 intergenic not near genes chr3L 7156694 5` UTR corn - chr3L 7946346 intergenic CG43880 - chr3L_4_7155001 chr3L_7155001 RAL-900_125b 1898 chr3L 7982918 7982985 chr3L 7983056 7983123 27 127 11.5 6.0 8.8 2.8 205 chr3L 7982918 intron nmo + chr3L 7983020 intron nmo + chr3L 7983123 intron nmo + chr3L_27_7980001 chr3L_7980001 RAL-900_125b 1899 chr3L 7985322 7985387 chr3L 7987700 7987765 NOF 25 2376 17.5 8.5 13.0 1.8 2443 chr3L 7985322 intron nmo + chr3L 7986544 intron nmo + chr3L 7987765 intron nmo + chr3L_25_7985001 chr3L_7985001 RAL-900_125b 1900 chr3L 8062804 8062850 chr3L 8062928 8062977 14 123 9.5 11.5 10.5 1.2 173 chr3L 8062804 intergenic not near genes chr3L 8062890 intergenic not near genes chr3L 8062977 intergenic not near genes chr3L_14_8060001 chr3L_8060001 RAL-900_125b 1901 chr3L 8148002 8148078 chr3L 8148260 8148336 19 258 8.0 13.0 10.5 1.7 334 chr3L 8148002 intron CG13676 - chr3L 8148169 intron CG13676 - chr3L 8148336 intron CG13676 - chr3L_19_8145001 chr3L_8145001 RAL-900_125b 1902 chr3L 8166067 8166141 chr3L 8166335 8166409 36 267 5.0 8.5 6.8 4.6 342 chr3L 8166067 intergenic not near genes chr3L 8166238 intergenic not near genes chr3L 8166409 intergenic not near genes chr3L_36_8165001 chr3L_8165001 RAL-900_125b 1903 chr3L 8226668 8226750 chr3L 8226817 8226892 12 145 5.5 0.0 2.8 3.2 224 chr3L 8226668 intergenic not near genes chr3L 8226780 intergenic not near genes chr3L 8226892 intergenic not near genes chr3L_12_8225001 chr3L_8225001 RAL-900_125b 1904 chr3L 8233543 8233582 chr3L 8238855 8238894 Rt1a 15 5309 7.0 18.5 12.8 1.1 5351 chr3L 8233543 intron CG7213 - chr3L 8236218 intron CG7213 - chr3L 8238894 intron,intron CG7213 -,Dscam4 + chr3L_15_8235001 chr3L_8235001 RAL-900_125b 1905 chr3L 8392548 8392695 chr3L 8392689 8392826 15 150 0.0 0.0 0.0 15.0 278 chr3L 8392548 intergenic Jon66Ci +,Jon66Cii - chr3L 8392687 intergenic Jon66Cii -,Jon66Ci + chr3L 8392826 3` UTR Jon66Cii - chr3L_15_8390001 chr3L_8390001 RAL-900_125b 1906 chr3L 8395792 8395856 chr3L 8395932 8395983 39 140 4.5 5.5 5.0 6.5 191 chr3L 8395792 intergenic CG7120 + chr3L 8395888 intergenic CG7120 + chr3L 8395983 intergenic CG7120 + chr3L_39_8395001 chr3L_8395001 RAL-900_125b 1907 chr3L 8442911 8442947 chr3L 8443042 8443078 10 131 0.0 18.0 9.0 1.0 167 chr3L 8442911 intergenic CG6983 - chr3L 8442994 intergenic CG6983 - chr3L 8443078 3` UTR CG6983 - chr3L_10_8440001 chr3L_8440001 RAL-900_125b 1908 chr3L 8456431 8456485 chr3L 8456574 8456593 17 140 11.0 19.0 15.0 1.1 162 chr3L 8456431 intron Gug + chr3L 8456512 intron Gug + chr3L 8456593 intron Gug + chr3L_17_8455001 chr3L_8455001 RAL-900_125b 1909 chr3L 8460864 8460877 chr3L 8460988 8461007 10 128 9.5 13.0 11.2 0.8 143 chr3L 8460864 intron Gug + chr3L 8460936 intron Gug + chr3L 8461007 intron Gug + chr3L_10_8460001 chr3L_8460001 RAL-900_125b 1910 chr3L 8481745 8481801 chr3L 8490954 8491010 roo 20 9200 6.0 11.0 8.5 2.1 9265 chr3L 8481745 intron CG43163 - chr3L 8486378 intron CG43163 - chr3L 8491010 intron CG43163 - chr3L_20_8485001 chr3L_8485001 RAL-900_125b 1911 chr3L 8498259 8498273 chr3L 8505776 8505790 blood 10 7517 21.0 11.5 16.2 0.6 7531 chr3L 8498259 intron CG43163 - chr3L 8502024 intron CG43163 - chr3L 8505790 intron CG43163 - chr3L_10_8500001 chr3L_8500001 RAL-900_125b 1912 chr3L 8498274 8498321 chr3L 8505775 8505838 blood 24 7515 6.5 11.5 9.0 2.4 7564 chr3L 8498274 intron CG43163 - chr3L 8502056 intron CG43163 - chr3L 8505838 intron CG43163 - chr3L_24_8500001 chr3L_8500001 RAL-900_125b 1913 chr3L 8576925 8577002 chr3L 8577059 8577125 40 130 3.0 9.0 6.0 5.7 200 chr3L 8576925 5` UTR CG43078 + chr3L 8577025 5` UTR CG43078 + chr3L 8577125 5` UTR CG43078 + chr3L_40_8575001 chr3L_8575001 RAL-900_125b 1914 chr3L 8643533 8643601 chr3L 8643659 8643727 31 126 10.5 10.0 10.2 2.8 194 chr3L 8643533 3` UTR Cpr66D + chr3L 8643630 intergenic Cpr66D + chr3L 8643727 intergenic Cpr66D + chr3L_31_8640001 chr3L_8640001 RAL-900_125b 1915 chr3L 8697240 8697289 chr3L 8697370 8697419 27 130 11.0 7.5 9.2 2.6 179 chr3L 8697240 intergenic not near genes chr3L 8697330 intergenic not near genes chr3L 8697419 intergenic not near genes chr3L_27_8695001 chr3L_8695001 RAL-900_125b 1916 chr3L 8791235 8791304 chr3L 8796705 8796773 I-element 17 5469 10.0 0.5 5.2 2.7 5538 chr3L 8791235 exon Fhos + chr3L 8794004 intron Fhos + chr3L 8796773 intron Fhos + chr3L_17_8790001 chr3L_8790001 RAL-900_125b 1917 chr3L 8916516 8916567 chr3L 8916651 8916697 24 134 0.0 5.5 2.8 6.3 181 chr3L 8916516 intron Tsp66E + chr3L 8916606 intron Tsp66E + chr3L 8916697 intron Tsp66E + chr3L_24_8915001 chr3L_8915001 RAL-900_125b 1918 chr3L 8950508 8950574 chr3L 8950652 8950717 22 143 11.5 12.0 11.8 1.7 209 chr3L 8950508 intron,intron CG43783 -,orb2 - chr3L 8950612 intron,intron CG43783 -,orb2 - chr3L 8950717 intron,intron CG43783 -,orb2 - chr3L_22_8950001 chr3L_8950001 RAL-900_125b 1919 chr3L 8959349 8959363 chr3L 8959560 8959574 9 211 17.5 2.0 9.8 0.8 225 chr3L 8959349 intron CG13313 + chr3L 8959462 intron CG13313 + chr3L 8959574 intron CG13313 + chr3L_9_8955001 chr3L_8955001 RAL-900_125b 1920 chr3L 9011079 9011154 chr3L 9011216 9011295 27 137 7.5 7.0 7.2 3.3 216 chr3L 9011079 intergenic not near genes chr3L 9011187 intergenic not near genes chr3L 9011295 intergenic not near genes chr3L_27_9010001 chr3L_9010001 RAL-900_125b 1921 chr3L 9013690 9013693 chr3L 18417066 18417066 4 9403374 32.0 31.0 31.5 0.1 9403376 chr3L 9013690 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_4_13715001 chr3L_13715001 RAL-900_125b 1922 chr3L 9022713 9022755 chr3L 9022839 9022881 14 125 16.5 7.5 12.0 1.1 168 chr3L 9022713 intergenic not near genes chr3L 9022797 intergenic not near genes chr3L 9022881 intergenic not near genes chr3L_14_9020001 chr3L_9020001 RAL-900_125b 1923 chr3L 9036253 9036281 chr3L 9036389 9036417 16 135 13.0 17.5 15.2 1.0 164 chr3L 9036253 intergenic not near genes chr3L 9036335 intergenic not near genes chr3L 9036417 intergenic not near genes chr3L_16_9035001 chr3L_9035001 RAL-900_125b 1924 chr3L 9076882 9076947 chr3L 9084492 9084532 412 20 7606 8.5 11.0 9.8 1.9 7650 chr3L 9076882 exon Tequila + chr3L 9080707 intron Tequila + chr3L 9084532 exon Tequila + chr3L_20_9080001 chr3L_9080001 RAL-900_125b 1925 chr3L 9118331 9118346 chr3L 9118449 9118471 6 125 19.0 13.5 16.2 0.3 140 chr3L 9118331 intron bol - chr3L 9118401 intron bol - chr3L 9118471 intron bol - chr3L_6_9115001 chr3L_9115001 RAL-900_125b 1926 chr3L 9129392 9129460 chr3L 9129549 9129623 30 156 8.0 8.5 8.2 3.3 231 chr3L 9129392 intron bol - chr3L 9129508 intron bol - chr3L 9129623 intron bol - chr3L_30_9125001 chr3L_9125001 RAL-900_125b 1927 chr3L 9130518 9130582 chr3L 9134321 9134386 412 19 3808 13.0 8.5 10.8 1.6 3868 chr3L 9130518 intergenic bol - chr3L 9132452 intergenic not near genes chr3L 9134386 intergenic Dhpr + chr3L_19_9130001 chr3L_9130001 RAL-900_125b 1928 chr3L 9143298 9143357 chr3L 9143430 9143489 8 132 11.0 3.5 7.2 1.0 191 chr3L 9143298 exon nwk + chr3L 9143394 intron nwk + chr3L 9143489 intron nwk + chr3L_8_9140001 chr3L_9140001 RAL-900_125b 1929 chr3L 9164652 9164684 chr3L 9166169 9166196 hobo 14 1517 15.0 0.0 7.5 1.6 1544 chr3L 9164652 intron Rdl - chr3L 9165424 intron Rdl - chr3L 9166196 intron Rdl - chr3L_14_9165001 chr3L_9165001 RAL-900_125b 1930 chr3L 9219212 9219235 chr3L 9219934 9219957 jockey 10 720 11.0 11.0 11.0 0.8 745 chr3L 9219212 intergenic not near genes chr3L 9219584 intergenic not near genes chr3L 9219957 intergenic not near genes chr3L_10_9215001 chr3L_9215001 RAL-900_125b 1931 chr3L 9219238 9219252 chr3L 9219924 9219974 jockey 11 716 5.5 9.5 7.5 1.3 736 chr3L 9219238 intergenic not near genes chr3L 9219606 intergenic not near genes chr3L 9219974 intergenic not near genes chr3L_11_9215001 chr3L_9215001 RAL-900_125b 1932 chr3L 9219260 9219272 chr3L 9219922 9219933 jockey 5 690 3.5 9.5 6.5 0.7 673 chr3L 9219260 intergenic not near genes chr3L 9219596 intergenic not near genes chr3L 9219933 intergenic not near genes chr3L_5_9215001 chr3L_9215001 RAL-900_125b 1933 chr3L 9237546 9237555 chr3L 9237676 9237685 5 130 5.0 13.5 9.2 0.5 139 chr3L 9237546 intergenic not near genes chr3L 9237616 intergenic not near genes chr3L 9237685 intergenic not near genes chr3L_5_9235001 chr3L_9235001 RAL-900_125b 1934 chr3L 9270589 9270649 chr3L 9278377 9278412 roo 16 7782 8.0 7.0 7.5 1.9 7823 chr3L 9270589 intron GluRIB + chr3L 9274500 intron GluRIB + chr3L 9278412 exon GluRIB + chr3L_16_9270001 chr3L_9270001 RAL-900_125b 1935 chr3L 9307796 9307796 chr3L 22908066 22908066 7 13600270 36.5 43.5 40.0 0.2 13600270 chr3L 9307796 intergenic not near genes chr3L 16107931 intron Zn72D - chr3L 22908066 intergenic not near genes chr3L_7_16105001 chr3L_16105001 RAL-900_125b 1936 chr3L 9344199 9344221 chr3L 9344320 9344349 8 127 0.0 19.0 9.5 0.8 150 chr3L 9344199 intron PGRP-LC + chr3L 9344274 intron PGRP-LC + chr3L 9344349 intron PGRP-LC + chr3L_8_9340001 chr3L_9340001 RAL-900_125b 1937 chr3L 9347356 9347412 chr3L 9347483 9347539 31 127 1.5 3.0 2.2 9.7 183 chr3L 9347356 intron PGRP-LC + chr3L 9347448 intron PGRP-LC + chr3L 9347539 intron PGRP-LC + chr3L_31_9345001 chr3L_9345001 RAL-900_125b 1938 chr3L 9348418 9348461 chr3L 9348970 9349008 24 549 13.0 0.0 6.5 3.2 590 chr3L 9348418 intergenic PGRP-LC + chr3L 9348713 intergenic PGRP-LC + chr3L 9349008 intergenic not near genes chr3L_24_9345001 chr3L_9345001 RAL-900_125b 1939 chr3L 9359545 9359611 chr3L 9359686 9359752 33 141 8.0 9.5 8.8 3.4 207 chr3L 9359545 3` UTR CG32039 + chr3L 9359648 3` UTR CG32039 + chr3L 9359752 3` UTR CG32039 + chr3L_33_9355001 chr3L_9355001 RAL-900_125b 1940 chr3L 9392496 9392502 chr3L 9395367 9395373 Doc 4 2871 9.0 17.0 13.0 0.3 2877 chr3L 9392496 intron CG4080 - chr3L 9393934 intron CG4080 - chr3L 9395373 intron CG4080 - chr3L_4_9390001 chr3L_9390001 RAL-900_125b 1941 chr3L 9443492 9443535 chr3L 9445333 9445376 S-element 24 1841 5.5 15.5 10.5 2.1 1884 chr3L 9443492 intron CG33926 + chr3L 9444434 intron CG33926 + chr3L 9445376 intron CG33926 + chr3L_24_9440001 chr3L_9440001 RAL-900_125b 1942 chr3L 9498162 9498215 chr3L 9498288 9498342 33 127 15.0 12.5 13.8 2.2 180 chr3L 9498162 intron path - chr3L 9498252 intron path - chr3L 9498342 intron path - chr3L_33_9495001 chr3L_9495001 RAL-900_125b 1943 chr3L 9501657 9501734 chr3L 9502193 9502248 roo 10 532 11.0 0.5 5.8 1.5 591 chr3L 9501657 intron path - chr3L 9501952 intron path - chr3L 9502248 intron path - chr3L_10_9500001 chr3L_9500001 RAL-900_125b 1944 chr3L 9503420 9503458 chr3L 9503554 9503597 25 138 13.0 15.5 14.2 1.6 177 chr3L 9503420 intron path - chr3L 9503508 intron path - chr3L 9503597 intron path - chr3L_25_9500001 chr3L_9500001 RAL-900_125b 1945 chr3L 9526480 9526516 chr3L 9528195 9528231 Doc 9 1715 6.0 6.0 6.0 1.3 1751 chr3L 9526480 intergenic not near genes chr3L 9527356 intergenic not near genes chr3L 9528231 intergenic not near genes chr3L_9_9525001 chr3L_9525001 RAL-900_125b 1946 chr3L 9533729 9533735 chr3L 9541317 9541345 412 4 7604 13.0 10.5 11.8 0.3 7616 chr3L 9533729 intergenic not near genes chr3L 9537537 intergenic not near genes chr3L 9541345 intergenic not near genes chr3L_4_9535001 chr3L_9535001 RAL-900_125b 1947 chr3L 9533737 9533760 chr3L 9541312 9541370 412 11 7593 7.5 9.5 8.5 1.2 7633 chr3L 9533737 intergenic not near genes chr3L 9537554 intergenic not near genes chr3L 9541370 intergenic not near genes chr3L_11_9535001 chr3L_9535001 RAL-900_125b 1948 chr3L 9575891 9575931 chr3L 9580993 9581060 jockey 11 5125 11.5 8.0 9.8 1.0 5169 chr3L 9575891 intron CG42673 + chr3L 9578476 intron CG42673 + chr3L 9581060 intron CG42673 + chr3L_11_9575001 chr3L_9575001 RAL-900_125b 1949 chr3L 9637806 9637873 chr3L 9637938 9638005 26 131 9.5 7.5 8.5 2.7 199 chr3L 9637806 exon fry - chr3L 9637906 intron fry - chr3L 9638005 intron fry - chr3L_26_9635001 chr3L_9635001 RAL-900_125b 1950 chr3L 9638974 9639051 chr3L 9639113 9639186 13 137 0.0 5.0 2.5 3.7 212 chr3L 9638974 intron,3` UTR fry -,CG8329 + chr3L 9639080 intron fry - chr3L 9639186 intron fry - chr3L_13_9635001 chr3L_9635001 RAL-900_125b 1951 chr3L 9640148 9640159 chr3L 9640276 9640287 4 128 4.5 0.0 2.2 1.2 139 chr3L 9640148 intron fry - chr3L 9640218 intron fry - chr3L 9640287 intron fry - chr3L_4_9640001 chr3L_9640001 RAL-900_125b 1952 chr3L 9652738 9652813 chr3L 9653000 9653075 32 262 7.5 8.0 7.8 3.6 337 chr3L 9652738 intron,intron fry -,CG33696 + chr3L 9652906 intron,intron fry -,CG33696 + chr3L 9653075 intron,intron fry -,CG33696 + chr3L_32_9650001 chr3L_9650001 RAL-900_125b 1953 chr3L 9754700 9754708 chr3L 9754834 9754841 8 134 5.5 0.0 2.8 2.1 141 chr3L 9754700 intron CG42268 - chr3L 9754770 intron CG42268 - chr3L 9754841 intron CG42268 - chr3L_8_9750001 chr3L_9750001 RAL-900_125b 1954 chr3L 9847984 9848004 chr3L 9848110 9848130 9 126 1.0 16.5 8.8 0.9 146 chr3L 9847984 intron RasGAP1 - chr3L 9848057 intron RasGAP1 - chr3L 9848130 intron RasGAP1 - chr3L_9_9845001 chr3L_9845001 RAL-900_125b 1955 chr3L 9848005 9848014 chr3L 9848109 9848140 8 121 2.5 16.5 9.5 0.8 135 chr3L 9848005 intron RasGAP1 - chr3L 9848072 intron RasGAP1 - chr3L 9848140 intron RasGAP1 - chr3L_8_9845001 chr3L_9845001 RAL-900_125b 1956 chr3L 9903791 9903806 chr3L 9903917 9903932 6 126 5.5 9.5 7.5 0.7 141 chr3L 9903791 intergenic not near genes chr3L 9903862 intergenic not near genes chr3L 9903932 intergenic not near genes chr3L_6_9900001 chr3L_9900001 RAL-900_125b 1957 chr3L 9929620 9929696 chr3L 9938452 9938527 roo 24 8831 6.5 6.0 6.2 3.3 8907 chr3L 9929620 intron CG34356 + chr3L 9934074 intron CG34356 + chr3L 9938527 intron CG34356 + chr3L_24_9930001 chr3L_9930001 RAL-900_125b 1958 chr3L 9966785 9966796 chr3L 9970249 9970255 7 3461 53.5 45.5 49.5 0.1 3470 chr3L 9966785 3` UTR,3` UTR CG34356 +,CG6685 - chr3L 9968520 5` UTR Nc + chr3L 9970255 exon Nc + chr3L_7_9965001 chr3L_9965001 RAL-900_125b 1959 chr3L 9966782 9966835 chr3L 9970258 9970321 29 3461 62.0 43.0 52.5 0.5 3539 chr3L 9966782 3` UTR,3` UTR CG34356 +,CG6685 - chr3L 9968552 5` UTR Nc + chr3L 9970321 exon Nc + chr3L_29_9965001 chr3L_9965001 RAL-900_125b 1960 chr3L 9990467 9990523 chr3L 9990621 9990677 21 147 8.0 9.5 8.8 2.1 210 chr3L 9990467 intron dpr6 + chr3L 9990572 intron dpr6 + chr3L 9990677 intron dpr6 + chr3L_21_9990001 chr3L_9990001 RAL-900_125b 1961 chr3L 9994053 9994088 chr3L 9994189 9994224 20 136 7.5 10.5 9.0 2.0 171 chr3L 9994053 intron dpr6 + chr3L 9994138 intron dpr6 + chr3L 9994224 intron dpr6 + chr3L_20_9990001 chr3L_9990001 RAL-900_125b 1962 chr3L 10004044 10004108 chr3L 10004174 10004238 27 128 3.0 6.5 4.8 4.7 194 chr3L 10004044 exon dpr6 + chr3L 10004141 intron dpr6 + chr3L 10004238 intron dpr6 + chr3L_27_10000001 chr3L_10000001 RAL-900_125b 1963 chr3L 10004109 10004113 chr3L 10004173 10004237 4 112 2.5 6.5 4.5 0.7 128 chr3L 10004109 intron dpr6 + chr3L 10004173 intron dpr6 + chr3L 10004237 intron dpr6 + chr3L_4_10000001 chr3L_10000001 RAL-900_125b 1964 chr3L 10011546 10011614 chr3L 10011678 10011746 27 131 7.0 8.0 7.5 3.2 200 chr3L 10011546 intron dpr6 + chr3L 10011646 intron dpr6 + chr3L 10011746 intron dpr6 + chr3L_27_10010001 chr3L_10010001 RAL-900_125b 1965 chr3L 10120231 10120251 chr3L 10120374 10120394 9 143 19.5 7.5 13.5 0.6 163 chr3L 10120231 intron dpr6 + chr3L 10120312 intron dpr6 + chr3L 10120394 intron dpr6 + chr3L_9_10120001 chr3L_10120001 RAL-900_125b 1966 chr3L 10120252 10120301 chr3L 10120373 10120444 23 132 6.5 7.0 6.8 2.9 192 chr3L 10120252 intron dpr6 + chr3L 10120348 intron dpr6 + chr3L 10120444 intron dpr6 + chr3L_23_10120001 chr3L_10120001 RAL-900_125b 1967 chr3L 10165620 10165621 chr3L 10165746 10165747 4 126 20.0 0.5 10.2 0.4 127 chr3L 10165620 intron dpr10 - chr3L 10165684 intron dpr10 - chr3L 10165747 intron dpr10 - chr3L_4_10165001 chr3L_10165001 RAL-900_125b 1968 chr3L 10204027 10204084 chr3L 10204217 10204264 26 190 6.0 4.0 5.0 4.3 237 chr3L 10204027 intergenic not near genes chr3L 10204146 intergenic not near genes chr3L 10204264 intergenic not near genes chr3L_26_10200001 chr3L_10200001 RAL-900_125b 1969 chr3L 10214766 10214830 chr3L 10214918 10214982 29 152 6.5 6.5 6.5 3.9 216 chr3L 10214766 intergenic not near genes chr3L 10214874 intergenic not near genes chr3L 10214982 intergenic not near genes chr3L_29_10210001 chr3L_10210001 RAL-900_125b 1970 chr3L 10281671 10281741 chr3L 10281839 10281909 22 167 10.0 5.0 7.5 2.6 238 chr3L 10281671 intergenic not near genes chr3L 10281790 intergenic not near genes chr3L 10281909 intergenic not near genes chr3L_22_10280001 chr3L_10280001 RAL-900_125b 1971 chr3L 10298623 10298694 chr3L 10298755 10298831 23 136 0.0 6.5 3.2 5.5 208 chr3L 10298623 intergenic not near genes chr3L 10298727 intergenic not near genes chr3L 10298831 intergenic not near genes chr3L_23_10295001 chr3L_10295001 RAL-900_125b 1972 chr3L 10300002 10300073 chr3L 10300144 10300215 25 141 4.5 9.0 6.8 3.2 213 chr3L 10300002 intergenic not near genes chr3L 10300108 intergenic not near genes chr3L 10300215 intergenic not near genes chr3L_25_10300001 chr3L_10300001 RAL-900_125b 1973 chr3L 10308702 10308764 chr3L 10308829 10308891 25 127 1.0 10.5 5.8 3.7 189 chr3L 10308702 intergenic not near genes chr3L 10308796 intergenic not near genes chr3L 10308891 intergenic not near genes chr3L_25_10305001 chr3L_10305001 RAL-900_125b 1974 chr3L 10328066 10328129 chr3L 10328228 10328291 29 162 8.5 10.0 9.2 2.8 225 chr3L 10328066 intergenic not near genes chr3L 10328178 intergenic not near genes chr3L 10328291 intergenic not near genes chr3L_29_10325001 chr3L_10325001 RAL-900_125b 1975 chr3L 10383171 10383233 chr3L 10383320 10383382 25 149 9.5 6.5 8.0 2.8 211 chr3L 10383171 intergenic not near genes chr3L 10383276 intergenic not near genes chr3L 10383382 intergenic not near genes chr3L_25_10380001 chr3L_10380001 RAL-900_125b 1976 chr3L 10390200 10390267 chr3L 10390342 10390409 25 142 5.5 11.0 8.2 2.7 209 chr3L 10390200 intergenic not near genes chr3L 10390304 intergenic not near genes chr3L 10390409 intergenic not near genes chr3L_25_10390001 chr3L_10390001 RAL-900_125b 1977 chr3L 10414893 10414967 chr3L 10417313 10417374 Doc 24 2421 8.5 8.5 8.5 2.5 2481 chr3L 10414893 intergenic CG12362 + chr3L 10416134 intergenic not near genes chr3L 10417374 intergenic not near genes chr3L_24_10415001 chr3L_10415001 RAL-900_125b 1978 chr3L 10417532 10417601 chr3L 10417652 10417686 21 120 6.5 9.0 7.8 2.4 154 chr3L 10417532 intergenic not near genes chr3L 10417609 intergenic not near genes chr3L 10417686 intergenic not near genes chr3L_21_10415001 chr3L_10415001 RAL-900_125b 1979 chr3L 10459667 10459740 chr3L 10459801 10459874 38 134 14.0 7.0 10.5 3.3 207 chr3L 10459667 3` UTR Gem3 - chr3L 10459770 3` UTR Gem3 - chr3L 10459874 3` UTR Gem3 - chr3L_38_10455001 chr3L_10455001 RAL-900_125b 1980 chr3L 10584229 10584300 chr3L 10584366 10584437 29 136 9.0 5.5 7.2 3.5 208 chr3L 10584229 intron A2bp1 + chr3L 10584333 intron A2bp1 + chr3L 10584437 intron A2bp1 + chr3L_29_10580001 chr3L_10580001 RAL-900_125b 1981 chr3L 10600405 10600470 chr3L 10600537 10600602 24 132 8.5 3.5 6.0 3.4 197 chr3L 10600405 intergenic not near genes chr3L 10600504 intergenic not near genes chr3L 10600602 intergenic not near genes chr3L_24_10600001 chr3L_10600001 RAL-900_125b 1982 chr3L 10614750 10614798 chr3L 10614887 10614927 9 131 0.5 14.5 7.5 1.1 177 chr3L 10614750 intergenic not near genes chr3L 10614838 intergenic not near genes chr3L 10614927 intergenic not near genes chr3L_9_10610001 chr3L_10610001 RAL-900_125b 1983 chr3L 10621799 10621876 chr3L 10621936 10622013 21 137 6.5 8.5 7.5 2.5 214 chr3L 10621799 intergenic not near genes chr3L 10621906 intergenic not near genes chr3L 10622013 intergenic not near genes chr3L_21_10620001 chr3L_10620001 RAL-900_125b 1984 chr3L 10647681 10647695 chr3L 10647831 10647845 7 149 8.5 4.0 6.2 1.0 164 chr3L 10647681 intron CG32066 - chr3L 10647763 intron CG32066 - chr3L 10647845 intron CG32066 - chr3L_7_10645001 chr3L_10645001 RAL-900_125b 1985 chr3L 10647696 10647705 chr3L 10647815 10647855 9 142 8.0 3.5 5.8 1.3 159 chr3L 10647696 intron CG32066 - chr3L 10647776 intron CG32066 - chr3L 10647855 intron CG32066 - chr3L_9_10645001 chr3L_10645001 RAL-900_125b 1986 chr3L 10647709 10647735 chr3L 10647813 10647879 11 145 4.5 3.0 3.8 2.3 170 chr3L 10647709 intron CG32066 - chr3L 10647794 intron CG32066 - chr3L 10647879 intron CG32066 - chr3L_11_10645001 chr3L_10645001 RAL-900_125b 1987 chr3L 10658066 10658206 chr3L 10658193 10658383 37 160 0.0 0.0 0.0 37.0 317 chr3L 10658066 intron CG32066 - chr3L 10658224 intron CG32066 - chr3L 10658383 intron CG32066 - chr3L_37_10655001 chr3L_10655001 RAL-900_125b 1988 chr3L 10735782 10735829 chr3L 10735921 10735968 23 139 11.5 12.5 12.0 1.8 186 chr3L 10735782 intergenic not near genes chr3L 10735875 intergenic not near genes chr3L 10735968 intergenic not near genes chr3L_23_10735001 chr3L_10735001 RAL-900_125b 1989 chr3L 10739762 10739768 chr3L 10739896 10739902 4 134 10.5 0.0 5.2 0.6 140 chr3L 10739762 intergenic not near genes chr3L 10739832 intergenic not near genes chr3L 10739902 intergenic not near genes chr3L_4_10735001 chr3L_10735001 RAL-900_125b 1990 chr3L 10762801 10762858 chr3L 10762918 10762972 16 126 6.5 5.5 6.0 2.3 171 chr3L 10762801 intergenic not near genes chr3L 10762886 intergenic not near genes chr3L 10762972 intergenic not near genes chr3L_16_10760001 chr3L_10760001 RAL-900_125b 1991 chr3L 10825492 10825523 chr3L 10825630 10825675 15 151 11.0 3.5 7.2 1.8 183 chr3L 10825492 5` UTR CR45246 + chr3L 10825584 5` UTR CR45246 + chr3L 10825675 intergenic CR45246 + chr3L_15_10825001 chr3L_10825001 RAL-900_125b 1992 chr3L 10842386 10842393 chr3L 10842516 10842523 5 130 2.5 0.0 1.2 2.3 137 chr3L 10842386 intergenic not near genes chr3L 10842454 intergenic not near genes chr3L 10842523 intergenic not near genes chr3L_5_10840001 chr3L_10840001 RAL-900_125b 1993 chr3L 10883462 10883489 chr3L 10883597 10883624 4 135 2.0 0.0 1.0 2.0 162 chr3L 10883462 exon CG7949 + chr3L 10883543 3` UTR CG7949 + chr3L 10883624 intergenic CG7949 + chr3L_4_10880001 chr3L_10880001 RAL-900_125b 1994 chr3L 10887361 10887373 chr3L 10887490 10887502 7 129 0.5 18.0 9.2 0.7 141 chr3L 10887361 intergenic not near genes chr3L 10887432 intergenic not near genes chr3L 10887502 intergenic not near genes chr3L_7_10885001 chr3L_10885001 RAL-900_125b 1995 chr3L 10897794 10897796 chr3L 23730762 23730764 4 12832968 19.0 39.0 29.0 0.1 12832970 chr3L 10897794 intron Aps - chr3L 17314279 intergenic not near genes chr3L 23730764 intergenic not near genes chr3L_4_17310001 chr3L_17310001 RAL-900_125b 1996 chr3L 10907915 10907949 chr3L 10908041 10908075 16 126 14.0 7.0 10.5 1.4 160 chr3L 10907915 intergenic not near genes chr3L 10907995 intergenic not near genes chr3L 10908075 intergenic not near genes chr3L_16_10905001 chr3L_10905001 RAL-900_125b 1997 chr3L 10919551 10919565 chr3L 10919775 10919789 5 224 2.0 0.0 1.0 2.5 238 chr3L 10919551 intergenic not near genes chr3L 10919670 intergenic not near genes chr3L 10919789 intergenic not near genes chr3L_5_10915001 chr3L_10915001 RAL-900_125b 1998 chr3L 10947473 10947477 chr3L 10947599 10947603 4 126 0.0 4.5 2.2 1.2 130 chr3L 10947473 intergenic not near genes chr3L 10947538 intergenic not near genes chr3L 10947603 intergenic not near genes chr3L_4_10945001 chr3L_10945001 RAL-900_125b 1999 chr3L 10951253 10951294 chr3L 10951379 10951420 12 126 0.0 4.0 2.0 4.0 167 chr3L 10951253 intergenic not near genes chr3L 10951336 intergenic not near genes chr3L 10951420 intergenic not near genes chr3L_12_10950001 chr3L_10950001 RAL-900_125b 2000 chr3L 10956360 10956399 chr3L 10956503 10956542 14 143 5.5 12.0 8.8 1.4 182 chr3L 10956360 intergenic not near genes chr3L 10956451 intergenic not near genes chr3L 10956542 intergenic not near genes chr3L_14_10955001 chr3L_10955001 RAL-900_125b 2001 chr3L 10997557 10997624 chr3L 10997690 10997763 22 143 0.0 6.0 3.0 5.5 206 chr3L 10997557 intron klu - chr3L 10997660 intron klu - chr3L 10997763 intron klu - chr3L_22_10995001 chr3L_10995001 RAL-900_125b 2002 chr3L 11029356 11029394 chr3L 11029491 11029528 14 134 8.0 5.5 6.8 1.8 172 chr3L 11029356 3` UTR CG32081 + chr3L 11029442 3` UTR CG32081 + chr3L 11029528 intergenic CG32081 + chr3L_14_11025001 chr3L_11025001 RAL-900_125b 2003 chr3L 11042076 11042122 chr3L 11042265 11042311 15 189 15.0 0.0 7.5 1.8 235 chr3L 11042076 intron CG43693 - chr3L 11042194 intron CG43693 - chr3L 11042311 intron CG43693 - chr3L_15_11040001 chr3L_11040001 RAL-900_125b 2004 chr3L 11052295 11052311 chr3L 11052418 11052439 8 127 5.5 11.5 8.5 0.8 144 chr3L 11052295 intergenic not near genes chr3L 11052367 intergenic not near genes chr3L 11052439 intergenic not near genes chr3L_8_11050001 chr3L_11050001 RAL-900_125b 2005 chr3L 11052312 11052361 chr3L 11052416 11052468 9 122 1.5 10.5 6.0 1.3 156 chr3L 11052312 intergenic not near genes chr3L 11052390 intergenic not near genes chr3L 11052468 intergenic not near genes chr3L_9_11050001 chr3L_11050001 RAL-900_125b 2006 chr3L 11087009 11087088 chr3L 11088847 11088927 S-element 22 1837 4.0 9.5 6.8 2.8 1918 chr3L 11087009 intron JIL-1 - chr3L 11087968 intron JIL-1 - chr3L 11088927 intron JIL-1 - chr3L_22_11085001 chr3L_11085001 RAL-900_125b 2007 chr3L 11105067 11105076 chr3L 11105198 11105207 4 131 22.0 11.0 16.5 0.2 140 chr3L 11105067 intergenic not near genes chr3L 11105137 intergenic not near genes chr3L 11105207 intergenic not near genes chr3L_4_11105001 chr3L_11105001 RAL-900_125b 2008 chr3L 11127882 11127950 chr3L 11128035 11128104 17 153 8.0 6.5 7.2 2.1 222 chr3L 11127882 intron CG42575 + chr3L 11127993 intron CG42575 + chr3L 11128104 intron CG42575 + chr3L_17_11125001 chr3L_11125001 RAL-900_125b 2009 chr3L 11135478 11135776 chr3L 11135758 11135911 25 251 0.0 0.0 0.0 25.0 433 chr3L 11135478 3` UTR CG14143 + chr3L 11135694 intergenic CG14143 +,CG32082 + chr3L 11135911 intergenic CG32082 +,CG14143 + chr3L_25_11135001 chr3L_11135001 RAL-900_125b 2010 chr3L 11145534 11145557 chr3L 11145674 11145697 7 140 0.0 12.0 6.0 1.0 163 chr3L 11145534 intron CG32082 + chr3L 11145616 intron CG32082 + chr3L 11145697 intron CG32082 + chr3L_7_11145001 chr3L_11145001 RAL-900_125b 2011 chr3L 11153818 11153880 chr3L 11154244 11154301 22 424 11.0 7.5 9.2 2.2 483 chr3L 11153818 intron CG32082 + chr3L 11154060 intron CG32082 + chr3L 11154301 intron CG32082 + chr3L_22_11150001 chr3L_11150001 RAL-900_125b 2012 chr3L 11224521 11224576 chr3L 11224693 11224747 15 171 0.0 11.0 5.5 2.3 226 chr3L 11224521 intron CG42671 + chr3L 11224634 intron CG42671 + chr3L 11224747 intron CG42671 + chr3L_15_11220001 chr3L_11220001 RAL-900_125b 2013 chr3L 11229961 11230019 chr3L 11230108 11230166 28 146 12.5 12.5 12.5 2.1 205 chr3L 11229961 intergenic CG42671 + chr3L 11230064 intergenic CG42671 + chr3L 11230166 intergenic not near genes chr3L_28_11230001 chr3L_11230001 RAL-900_125b 2014 chr3L 11241728 11241790 chr3L 11241859 11241922 26 132 1.5 6.0 3.8 5.4 194 chr3L 11241728 intergenic not near genes chr3L 11241825 intergenic not near genes chr3L 11241922 intergenic not near genes chr3L_26_11240001 chr3L_11240001 RAL-900_125b 2015 chr3L 11249792 11249870 chr3L 11249935 11250013 20 143 0.5 6.5 3.5 4.4 221 chr3L 11249792 5` UTR CR44717 + chr3L 11249902 5` UTR CR44717 + chr3L 11250013 5` UTR CR44717 + chr3L_20_11245001 chr3L_11245001 RAL-900_125b 2016 chr3L 11264421 11264488 chr3L 11271423 11271490 17.6 21 7001 9.0 6.0 7.5 2.5 7069 chr3L 11264421 intergenic not near genes chr3L 11267956 intergenic not near genes chr3L 11271490 intergenic not near genes chr3L_21_11265001 chr3L_11265001 RAL-900_125b 2017 chr3L 11286022 11286088 chr3L 11286153 11286219 32 130 8.5 9.0 8.8 3.3 197 chr3L 11286022 intergenic not near genes chr3L 11286120 intergenic not near genes chr3L 11286219 intergenic not near genes chr3L_32_11285001 chr3L_11285001 RAL-900_125b 2018 chr3L 11304789 11304807 chr3L 11304936 11304954 5 147 16.5 0.0 8.2 0.5 165 chr3L 11304789 intergenic not near genes chr3L 11304872 intergenic not near genes chr3L 11304954 intergenic not near genes chr3L_5_11300001 chr3L_11300001 RAL-900_125b 2019 chr3L 11329649 11329722 chr3L 11332904 11332957 jockey 30 3251 5.0 7.0 6.0 4.3 3308 chr3L 11329649 intergenic not near genes chr3L 11331303 intergenic not near genes chr3L 11332957 intergenic not near genes chr3L_30_11330001 chr3L_11330001 RAL-900_125b 2020 chr3L 11360002 11360032 chr3L 11360230 11360260 9 227 12.0 9.5 10.8 0.8 258 chr3L 11360002 intergenic not near genes chr3L 11360131 intergenic not near genes chr3L 11360260 intergenic not near genes chr3L_9_11360001 chr3L_11360001 RAL-900_125b 2021 chr3L 11360037 11360071 chr3L 11360229 11360238 12 218 7.5 9.5 8.5 1.3 201 chr3L 11360037 intergenic not near genes chr3L 11360138 intergenic not near genes chr3L 11360238 intergenic not near genes chr3L_12_11360001 chr3L_11360001 RAL-900_125b 2022 chr3L 11390304 11390334 chr3L 11390470 11390500 16 166 0.0 5.0 2.5 4.6 196 chr3L 11390304 intergenic not near genes chr3L 11390402 intergenic not near genes chr3L 11390500 intergenic not near genes chr3L_16_11390001 chr3L_11390001 RAL-900_125b 2023 chr3L 11432867 11432919 chr3L 11432996 11433048 25 129 4.0 5.5 4.8 4.3 181 chr3L 11432867 intergenic not near genes chr3L 11432958 intergenic not near genes chr3L 11433048 intergenic not near genes chr3L_25_11430001 chr3L_11430001 RAL-900_125b 2024 chr3L 11456858 11456884 chr3L 11457007 11457033 13 149 11.0 10.0 10.5 1.1 175 chr3L 11456858 intergenic CG12289 - chr3L 11456946 intergenic CG12289 - chr3L 11457033 intergenic CG12289 - chr3L_13_11455001 chr3L_11455001 RAL-900_125b 2025 chr3L 11560739 11560810 chr3L 11560867 11560938 38 128 8.5 9.0 8.8 3.9 199 chr3L 11560739 intron Mob2 - chr3L 11560838 intron Mob2 - chr3L 11560938 intron Mob2 - chr3L_38_11560001 chr3L_11560001 RAL-900_125b 2026 chr3L 11579512 11579583 chr3L 11579668 11579734 40 155 10.0 0.5 5.2 6.5 222 chr3L 11579512 intergenic CG43390 - chr3L 11579623 intergenic CG43390 - chr3L 11579734 intergenic CG43390 - chr3L_40_11575001 chr3L_11575001 RAL-900_125b 2027 chr3L 11587871 11587943 chr3L 11587997 11588069 28 126 4.5 9.0 6.8 3.6 198 chr3L 11587871 intergenic rt - chr3L 11587970 intergenic rt - chr3L 11588069 intergenic rt - chr3L_28_11585001 chr3L_11585001 RAL-900_125b 2028 chr3L 11588684 11588759 chr3L 11588890 11588946 34 204 5.0 8.0 6.5 4.5 262 chr3L 11588684 intergenic not near genes chr3L 11588815 intergenic not near genes chr3L 11588946 intergenic not near genes chr3L_34_11585001 chr3L_11585001 RAL-900_125b 2029 chr3L 11590218 11590273 chr3L 11590358 11590413 23 140 4.0 6.0 5.0 3.8 195 chr3L 11590218 intergenic CG7377 + chr3L 11590316 intergenic CG7377 + chr3L 11590413 intergenic CG7377 +,CG33268 - chr3L_23_11590001 chr3L_11590001 RAL-900_125b 2030 chr3L 11663713 11663754 chr3L 11663877 11663924 13 173 9.0 0.0 4.5 2.4 211 chr3L 11663713 intron CG32085 - chr3L 11663818 intron CG32085 - chr3L 11663924 intron CG32085 - chr3L_13_11660001 chr3L_11660001 RAL-900_125b 2031 chr3L 11723045 11723107 chr3L 11727890 11727952 Doc 27 4845 12.5 13.0 12.8 2.0 4907 chr3L 11723045 3` UTR Bmcp + chr3L 11725498 intron Bmcp + chr3L 11727952 3` UTR Bmcp + chr3L_27_11725001 chr3L_11725001 RAL-900_125b 2032 chr3L 11742536 11742605 chr3L 11742790 11742859 31 253 9.5 8.5 9.0 3.1 323 chr3L 11742536 intron CG6024 - chr3L 11742698 intron CG6024 - chr3L 11742859 intron CG6024 - chr3L_31_11740001 chr3L_11740001 RAL-900_125b 2033 chr3L 11743972 11744043 chr3L 11744130 11744201 17 155 8.5 3.5 6.0 2.4 229 chr3L 11743972 exon CG6024 - chr3L 11744086 intron CG6024 - chr3L 11744201 intron CG6024 - chr3L_17_11740001 chr3L_11740001 RAL-900_125b 2034 chr3L 11757878 11757906 chr3L 11758025 11758053 9 146 14.0 0.0 7.0 1.1 175 chr3L 11757878 intron CG6024 - chr3L 11757966 intron CG6024 - chr3L 11758053 intron CG6024 - chr3L_9_11755001 chr3L_11755001 RAL-900_125b 2035 chr3L 11762300 11762373 chr3L 11762467 11762540 31 167 8.5 14.0 11.2 2.5 240 chr3L 11762300 intron CG6024 - chr3L 11762420 intron CG6024 - chr3L 11762540 intron CG6024 - chr3L_31_11760001 chr3L_11760001 RAL-900_125b 2036 chr3L 802565 802566 chr3L 11777678 11777678 4 10975112 24.0 33.0 28.5 0.1 10975113 chr3L 802565 intergenic not near genes chr3L 6290122 intergenic not near genes chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_4_6290001 chr3L_6290001 RAL-900_125b 2037 chr3L 11811411 11811482 chr3L 11811539 11811606 34 128 14.5 10.5 12.5 2.5 195 chr3L 11811411 intron CG42255 - chr3L 11811508 intron CG42255 - chr3L 11811606 exon CG42255 - chr3L_34_11810001 chr3L_11810001 RAL-900_125b 2038 chr3L 11816759 11816801 chr3L 11816910 11816952 16 151 16.0 14.5 15.2 1.0 193 chr3L 11816759 3` UTR CG5946 - chr3L 11816856 3` UTR CG5946 - chr3L 11816952 3` UTR CG5946 - chr3L_16_11815001 chr3L_11815001 RAL-900_125b 2039 chr3L 11816802 11816806 chr3L 11816907 11816957 4 140 14.0 14.0 14.0 0.3 155 chr3L 11816802 3` UTR CG5946 - chr3L 11816880 3` UTR CG5946 - chr3L 11816957 3` UTR CG5946 - chr3L_4_11815001 chr3L_11815001 RAL-900_125b 2040 chr3L 11864509 11864525 chr3L 11865854 11865870 pogo 10 1345 22.5 8.0 15.2 0.6 1361 chr3L 11864509 intron CG44837 - chr3L 11865190 intron CG44837 - chr3L 11865870 intron CG44837 - chr3L_10_11865001 chr3L_11865001 RAL-900_125b 2041 chr3L 11864527 11864582 chr3L 11865847 11865857 pogo 20 1338 8.5 5.5 7.0 2.5 1330 chr3L 11864527 intron CG44837 - chr3L 11865192 intron CG44837 - chr3L 11865857 intron CG44837 - chr3L_20_11865001 chr3L_11865001 RAL-900_125b 2042 chr3L 11887208 11887261 chr3L 11887355 11887412 16 149 12.0 0.0 6.0 2.3 204 chr3L 11887208 intron CG44837 - chr3L 11887310 intron,3` UTR CG44837 -,CG5897 - chr3L 11887412 intron,3` UTR CG44837 -,CG5897 - chr3L_16_11885001 chr3L_11885001 RAL-900_125b 2043 chr3L 11903891 11903896 chr3L 11904018 11904023 4 127 0.0 0.0 0.0 4.0 132 chr3L 11903891 intron CG44837 - chr3L 11903957 intron CG44837 - chr3L 11904023 intron CG44837 - chr3L_4_11900001 chr3L_11900001 RAL-900_125b 2044 chr3L 12052667 12052727 chr3L 12052806 12052866 27 138 13.0 9.0 11.0 2.2 199 chr3L 12052667 intron rols - chr3L 12052766 intron rols - chr3L 12052866 intron rols - chr3L_27_12050001 chr3L_12050001 RAL-900_125b 2045 chr3L 12075380 12075460 chr3L 12075519 12075594 32 134 7.0 0.0 3.5 7.1 214 chr3L 12075380 intron Sema-5c - chr3L 12075487 intron Sema-5c - chr3L 12075594 intron Sema-5c - chr3L_32_12075001 chr3L_12075001 RAL-900_125b 2046 chr3L 12092350 12092421 chr3L 12092477 12092548 18 126 10.5 4.5 7.5 2.1 198 chr3L 12092350 intergenic not near genes chr3L 12092449 intergenic not near genes chr3L 12092548 intergenic not near genes chr3L_18_12090001 chr3L_12090001 RAL-900_125b 2047 chr3L 12170744 12170818 chr3L 12170876 12170950 27 131 5.5 9.5 7.5 3.2 206 chr3L 12170744 intron Rh7 - chr3L 12170847 intron Rh7 - chr3L 12170950 intron Rh7 - chr3L_27_12170001 chr3L_12170001 RAL-900_125b 2048 chr3L 12186368 12186400 chr3L 12186534 12186566 20 166 5.5 12.5 9.0 2.0 198 chr3L 12186368 intron CG6910 + chr3L 12186467 intron CG6910 + chr3L 12186566 exon CG6910 + chr3L_20_12185001 chr3L_12185001 RAL-900_125b 2049 chr3L 12290214 12290277 chr3L 12290354 12290417 12 140 9.5 11.0 10.2 1.1 203 chr3L 12290214 intergenic CR45658 - chr3L 12290316 intergenic CR45658 - chr3L 12290417 intergenic CR45658 - chr3L_12_12290001 chr3L_12290001 RAL-900_125b 2050 chr3L 12297441 12297470 chr3L 12297651 12297680 12 210 5.5 0.0 2.8 3.2 239 chr3L 12297441 intergenic not near genes chr3L 12297560 intergenic not near genes chr3L 12297680 intergenic not near genes chr3L_12_12295001 chr3L_12295001 RAL-900_125b 2051 chr3L 12301992 12301998 chr3L 12302126 12302132 4 134 0.0 21.0 10.5 0.3 140 chr3L 12301992 intergenic CR44550 +,CR44551 - chr3L 12302062 intergenic CR44551 -,CR44550 + chr3L 12302132 intergenic CR44551 -,CR44550 + chr3L_4_12300001 chr3L_12300001 RAL-900_125b 2052 chr3L 12304054 12304071 chr3L 12304180 12304197 5 123 12.0 16.0 14.0 0.3 143 chr3L 12304054 intergenic not near genes chr3L 12304126 intergenic not near genes chr3L 12304197 intergenic not near genes chr3L_5_12300001 chr3L_12300001 RAL-900_125b 2053 chr3L 12304073 12304106 chr3L 12304178 12304232 13 121 7.0 15.5 11.2 1.1 159 chr3L 12304073 intergenic not near genes chr3L 12304152 intergenic not near genes chr3L 12304232 intergenic not near genes chr3L_13_12300001 chr3L_12300001 RAL-900_125b 2054 chr3L 12335336 12335361 chr3L 12335465 12335490 5 127 15.0 6.5 10.8 0.4 154 chr3L 12335336 exon CG32105 + chr3L 12335413 exon CG32105 + chr3L 12335490 3` UTR CG32105 + chr3L_5_12335001 chr3L_12335001 RAL-900_125b 2055 chr3L 12335364 12335416 chr3L 12335463 12335535 22 105 7.5 7.5 7.5 2.6 171 chr3L 12335364 exon CG32105 + chr3L 12335450 3` UTR CG32105 + chr3L 12335535 3` UTR CG32105 + chr3L_22_12335001 chr3L_12335001 RAL-900_125b 2056 chr3L 12369478 12369560 chr3L 12369702 12369785 14 222 9.0 0.0 4.5 2.5 307 chr3L 12369478 intron Ncc69 - chr3L 12369632 intron Ncc69 - chr3L 12369785 intron Ncc69 - chr3L_14_12365001 chr3L_12365001 RAL-900_125b 2057 chr3L 12381480 12381552 chr3L 12381626 12381698 15 146 3.5 8.5 6.0 2.1 218 chr3L 12381480 intron Ncc69 - chr3L 12381589 intron Ncc69 - chr3L 12381698 intron Ncc69 - chr3L_15_12380001 chr3L_12380001 RAL-900_125b 2058 chr3L 12390925 12390957 chr3L 12391075 12391107 16 150 16.5 10.5 13.5 1.1 182 chr3L 12390925 5` UTR Ncc69 - chr3L 12391016 5` UTR Ncc69 - chr3L 12391107 5` UTR Ncc69 - chr3L_16_12390001 chr3L_12390001 RAL-900_125b 2059 chr3L 12390958 12391001 chr3L 12391072 12391151 19 147 7.0 9.5 8.2 2.1 193 chr3L 12390958 5` UTR Ncc69 - chr3L 12391054 5` UTR Ncc69 - chr3L 12391151 5` UTR Ncc69 - chr3L_19_12390001 chr3L_12390001 RAL-900_125b 2060 chr3L 12446225 12446241 chr3L 12446353 12446369 6 126 19.0 6.5 12.8 0.4 144 chr3L 12446225 intergenic not near genes chr3L 12446297 intergenic not near genes chr3L 12446369 intergenic not near genes chr3L_6_12445001 chr3L_12445001 RAL-900_125b 2061 chr3L 12446247 12446280 chr3L 12446349 12446408 7 105 11.0 5.5 8.2 0.8 161 chr3L 12446247 intergenic not near genes chr3L 12446328 intergenic not near genes chr3L 12446408 intergenic not near genes chr3L_7_12445001 chr3L_12445001 RAL-900_125b 2062 chr3L 12446284 12446301 chr3L 12446347 12446381 8 89 7.0 7.0 7.0 1.0 97 chr3L 12446284 intergenic not near genes chr3L 12446332 intergenic not near genes chr3L 12446381 intergenic not near genes chr3L_8_12445001 chr3L_12445001 RAL-900_125b 2063 chr3L 12449876 12449912 chr3L 12450006 12450041 12 130 8.5 0.0 4.2 2.3 165 chr3L 12449876 intergenic not near genes chr3L 12449958 intergenic not near genes chr3L 12450041 intergenic not near genes chr3L_12_12445001 chr3L_12445001 RAL-900_125b 2064 chr3L 12453573 12453608 chr3L 12453723 12453759 7 150 7.0 5.0 6.0 1.0 186 chr3L 12453573 intergenic not near genes chr3L 12453666 intergenic not near genes chr3L 12453759 intergenic not near genes chr3L_7_12450001 chr3L_12450001 RAL-900_125b 2065 chr3L 12491653 12491720 chr3L 12491786 12491853 34 133 8.5 7.5 8.0 3.8 200 chr3L 12491653 intergenic CG10657 -,CR45682 +,CR45681 + chr3L 12491753 intergenic CG10657 -,CR45682 + chr3L 12491853 3` UTR,5` UTR CG10657 -,CR45682 + chr3L_34_12490001 chr3L_12490001 RAL-900_125b 2066 chr3L 12578003 12578057 chr3L 12578141 12578195 10 138 5.0 0.0 2.5 2.9 192 chr3L 12578003 intergenic not near genes chr3L 12578099 intergenic not near genes chr3L 12578195 intergenic not near genes chr3L_10_12575001 chr3L_12575001 RAL-900_125b 2067 chr3L 12610951 12611019 chr3L 12611247 12611315 32 296 0.0 8.5 4.2 6.2 364 chr3L 12610951 intron caup + chr3L 12611133 intron caup + chr3L 12611315 intron caup + chr3L_32_12610001 chr3L_12610001 RAL-900_125b 2068 chr3L 12612538 12612606 chr3L 12612676 12612733 27 138 6.5 7.5 7.0 3.4 195 chr3L 12612538 intron caup + chr3L 12612636 intron caup + chr3L 12612733 intron caup + chr3L_27_12610001 chr3L_12610001 RAL-900_125b 2069 chr3L 12620972 12620983 chr3L 12621074 12621094 4 109 14.5 16.5 15.5 0.2 122 chr3L 12620972 3` UTR caup + chr3L 12621033 3` UTR caup + chr3L 12621094 3` UTR caup + chr3L_4_12620001 chr3L_12620001 RAL-900_125b 2070 chr3L 12626126 12626187 chr3L 12626285 12626346 8 159 8.0 4.5 6.2 1.1 220 chr3L 12626126 intergenic not near genes chr3L 12626236 intergenic not near genes chr3L 12626346 intergenic not near genes chr3L_8_12625001 chr3L_12625001 RAL-900_125b 2071 chr3L 12657600 12657636 chr3L 12657735 12657771 13 133 6.5 2.0 4.2 2.5 171 chr3L 12657600 intergenic not near genes chr3L 12657686 intergenic not near genes chr3L 12657771 intergenic not near genes chr3L_13_12655001 chr3L_12655001 RAL-900_125b 2072 chr3L 12668021 12668090 chr3L 12668157 12668225 12 135 0.0 7.5 3.8 2.5 204 chr3L 12668021 intergenic not near genes chr3L 12668123 intergenic not near genes chr3L 12668225 intergenic not near genes chr3L_12_12665001 chr3L_12665001 RAL-900_125b 2073 chr3L 12699722 12699801 chr3L 12699953 12700031 33 230 5.0 6.0 5.5 5.1 309 chr3L 12699722 intron mirr + chr3L 12699876 intron mirr + chr3L 12700031 intron mirr + chr3L_33_12695001 chr3L_12695001 RAL-900_125b 2074 chr3L 12705372 12705447 chr3L 12705522 12705578 6 132 1.5 10.0 5.8 0.9 206 chr3L 12705372 intron mirr + chr3L 12705475 intron mirr + chr3L 12705578 intron mirr + chr3L_6_12705001 chr3L_12705001 RAL-900_125b 2075 chr3L 12706592 12706653 chr3L 12706769 12706830 24 177 7.5 10.0 8.8 2.4 238 chr3L 12706592 intron mirr + chr3L 12706711 intron mirr + chr3L 12706830 intron mirr + chr3L_24_12705001 chr3L_12705001 RAL-900_125b 2076 chr3L 12727988 12728042 chr3L 12728122 12728188 25 144 6.5 0.0 3.2 6.0 200 chr3L 12727988 intergenic not near genes chr3L 12728088 intergenic not near genes chr3L 12728188 intergenic not near genes chr3L_25_12725001 chr3L_12725001 RAL-900_125b 2077 chr3L 12773701 12773712 chr3L 12773835 12773846 4 134 4.0 24.5 14.2 0.3 145 chr3L 12773701 intergenic Hip1 -,CG32106 - chr3L 12773774 intergenic CG32106 -,Hip1 - chr3L 12773846 intergenic CG32106 -,Hip1 - chr3L_4_12770001 chr3L_12770001 RAL-900_125b 2078 chr3L 12799806 12799829 chr3L 12799964 12799987 7 158 15.5 17.5 16.5 0.4 181 chr3L 12799806 intron Atg1 - chr3L 12799896 intron Atg1 - chr3L 12799987 intron Atg1 - chr3L_7_12795001 chr3L_12795001 RAL-900_125b 2079 chr3L 12830408 12830462 chr3L 12830547 12830600 13 138 13.5 8.0 10.8 1.1 192 chr3L 12830408 intron CG10960 - chr3L 12830504 intron CG10960 - chr3L 12830600 intron CG10960 - chr3L_13_12830001 chr3L_12830001 RAL-900_125b 2080 chr3L 12857962 12858004 chr3L 12858106 12858133 19 143 0.0 7.5 3.8 4.0 171 chr3L 12857962 3` UTR CG32107 - chr3L 12858048 3` UTR CG32107 - chr3L 12858133 3` UTR CG32107 - chr3L_19_12855001 chr3L_12855001 RAL-900_125b 2081 chr3L 12865814 12865829 chr3L 12865952 12865957 5 136 5.5 14.0 9.8 0.5 143 chr3L 12865814 intergenic not near genes chr3L 12865886 intergenic not near genes chr3L 12865957 intergenic not near genes chr3L_5_12865001 chr3L_12865001 RAL-900_125b 2082 chr3L 12874876 12874950 chr3L 12877218 12877292 jockey 33 2340 4.0 10.5 7.2 4.0 2416 chr3L 12874876 intergenic not near genes chr3L 12876084 intergenic not near genes chr3L 12877292 intergenic not near genes chr3L_33_12875001 chr3L_12875001 RAL-900_125b 2083 chr3L 12894765 12894801 chr3L 12894893 12894929 17 127 15.0 12.5 13.8 1.1 164 chr3L 12894765 intergenic CG14118 + chr3L 12894847 intergenic CG14118 + chr3L 12894929 intergenic CG14118 + chr3L_17_12890001 chr3L_12890001 RAL-900_125b 2084 chr3L 12898846 12898858 chr3L 12898968 12898985 4 125 16.5 9.0 12.8 0.3 139 chr3L 12898846 intergenic not near genes chr3L 12898916 intergenic not near genes chr3L 12898985 intergenic not near genes chr3L_4_12895001 chr3L_12895001 RAL-900_125b 2085 chr3L 12898862 12898911 chr3L 12898964 12899002 16 115 6.0 8.0 7.0 2.0 140 chr3L 12898862 intergenic not near genes chr3L 12898932 intergenic not near genes chr3L 12899002 intergenic not near genes chr3L_16_12895001 chr3L_12895001 RAL-900_125b 2086 chr3L 12919235 12919266 chr3L 12924758 12924769 Rt1c 11 5517 13.5 9.5 11.5 0.9 5534 chr3L 12919235 intergenic not near genes chr3L 12922002 intergenic not near genes chr3L 12924769 intergenic not near genes chr3L_11_12920001 chr3L_12920001 RAL-900_125b 2087 chr3L 12957742 12957808 chr3L 12962274 12962340 copia 26 4532 10.5 10.0 10.2 2.3 4598 chr3L 12957742 intergenic not near genes chr3L 12960041 intergenic not near genes chr3L 12962340 intergenic not near genes chr3L_26_12960001 chr3L_12960001 RAL-900_125b 2088 chr3L 12987354 12987385 chr3L 12987486 12987516 9 131 0.0 13.5 6.8 1.2 162 chr3L 12987354 intergenic not near genes chr3L 12987435 intergenic not near genes chr3L 12987516 intergenic not near genes chr3L_9_12985001 chr3L_12985001 RAL-900_125b 2089 chr3L 13017872 13017917 chr3L 13018004 13018049 28 132 3.5 20.5 12.0 2.2 177 chr3L 13017872 intergenic mRpL20 -,ste14 +,CR45445 - chr3L 13017960 intergenic mRpL20 -,ste14 +,CR45445 - chr3L 13018049 intergenic mRpL20 -,ste14 +,CR45445 - chr3L_28_13015001 chr3L_13015001 RAL-900_125b 2090 chr3L 13055791 13055798 chr3L 13055941 13055953 5 154 24.0 9.5 16.8 0.3 162 chr3L 13055791 intergenic not near genes chr3L 13055872 intergenic not near genes chr3L 13055953 intergenic not near genes chr3L_5_13055001 chr3L_13055001 RAL-900_125b 2091 chr3L 13055801 13055848 chr3L 13055935 13055996 14 146 11.5 9.0 10.2 1.2 195 chr3L 13055801 intergenic not near genes chr3L 13055898 intergenic not near genes chr3L 13055996 intergenic not near genes chr3L_14_13055001 chr3L_13055001 RAL-900_125b 2092 chr3L 13073992 13074070 chr3L 13074175 13074254 30 183 2.5 5.5 4.0 6.0 262 chr3L 13073992 intergenic not near genes chr3L 13074123 intergenic not near genes chr3L 13074254 intergenic not near genes chr3L_30_13070001 chr3L_13070001 RAL-900_125b 2093 chr3L 13085004 13085078 chr3L 13085133 13085207 18 129 9.0 9.5 9.2 1.8 203 chr3L 13085004 intergenic not near genes chr3L 13085106 intergenic not near genes chr3L 13085207 intergenic not near genes chr3L_18_13085001 chr3L_13085001 RAL-900_125b 2094 chr3L 13122995 13123049 chr3L 13123121 13123175 15 123 10.0 13.0 11.5 1.2 180 chr3L 13122995 intergenic not near genes chr3L 13123085 intergenic not near genes chr3L 13123175 intergenic not near genes chr3L_15_13120001 chr3L_13120001 RAL-900_125b 2095 chr3L 13182399 13182474 chr3L 13182527 13182602 20 128 4.5 6.0 5.2 3.2 203 chr3L 13182399 intergenic not near genes chr3L 13182500 intergenic not near genes chr3L 13182602 intergenic not near genes chr3L_20_13180001 chr3L_13180001 RAL-900_125b 2096 chr3L 13188349 13188353 chr3L 13188486 13188491 5 138 7.5 0.0 3.8 1.0 142 chr3L 13188349 intergenic not near genes chr3L 13188420 intergenic not near genes chr3L 13188491 intergenic not near genes chr3L_5_13185001 chr3L_13185001 RAL-900_125b 2097 chr3L 13197059 13197117 chr3L 13197228 13197284 23 171 3.0 6.5 4.8 4.0 225 chr3L 13197059 intergenic not near genes chr3L 13197172 intergenic not near genes chr3L 13197284 intergenic not near genes chr3L_23_13195001 chr3L_13195001 RAL-900_125b 2098 chr3L 13223164 13223234 chr3L 13223291 13223361 16 125 9.5 14.5 12.0 1.2 197 chr3L 13223164 intergenic not near genes chr3L 13223262 intergenic not near genes chr3L 13223361 intergenic not near genes chr3L_16_13220001 chr3L_13220001 RAL-900_125b 2099 chr3L 13264743 13264753 chr3L 13264869 13264879 5 126 22.5 4.5 13.5 0.3 136 chr3L 13264743 intron caps + chr3L 13264811 intron caps + chr3L 13264879 intron caps + chr3L_5_13260001 chr3L_13260001 RAL-900_125b 2100 chr3L 13301263 13301282 chr3L 13301395 13301414 11 132 0.0 16.0 8.0 1.2 151 chr3L 13301263 intergenic SP + chr3L 13301338 intergenic SP + chr3L 13301414 intergenic SP + chr3L_11_13300001 chr3L_13300001 RAL-900_125b 2101 chr3L 13337133 13337158 chr3L 13337274 13337299 11 141 6.0 14.5 10.2 1.0 166 chr3L 13337133 intergenic not near genes chr3L 13337216 intergenic not near genes chr3L 13337299 intergenic not near genes chr3L_11_13335001 chr3L_13335001 RAL-900_125b 2102 chr3L 13361742 13361801 chr3L 13361861 13361919 15 129 3.5 11.5 7.5 1.8 177 chr3L 13361742 intergenic not near genes chr3L 13361830 intergenic not near genes chr3L 13361919 intergenic not near genes chr3L_15_13360001 chr3L_13360001 RAL-900_125b 2103 chr3L 13436037 13436070 chr3L 20815830 20815863 16 7379793 21.0 31.0 26.0 0.6 7379826 chr3L 13436037 exon CG10154 - chr3L 17125950 intron Rbp6 - chr3L 20815863 intron CG3618 - chr3L_16_17125001 chr3L_17125001 RAL-900_125b 2104 chr3L 13477001 13477015 chr3L 13477128 13477139 10 127 0.0 15.5 7.8 1.1 138 chr3L 13477001 intergenic not near genes chr3L 13477070 intergenic stv + chr3L 13477139 intergenic stv + chr3L_10_13475001 chr3L_13475001 RAL-900_125b 2105 chr3L 13477016 13477036 chr3L 13477122 13477163 9 125 1.0 14.5 7.8 1.0 147 chr3L 13477016 intergenic not near genes chr3L 13477090 intergenic stv + chr3L 13477163 intergenic stv + chr3L_9_13475001 chr3L_13475001 RAL-900_125b 2106 chr3L 13525114 13525168 chr3L 13532960 13533014 roo 18 7846 12.5 8.5 10.5 1.6 7900 chr3L 13525114 intergenic not near genes chr3L 13529064 intergenic not near genes chr3L 13533014 intergenic not near genes chr3L_18_13525001 chr3L_13525001 RAL-900_125b 2107 chr3L 13525169 13525174 chr3L 13532955 13533020 roo 5 7834 12.0 8.0 10.0 0.5 7851 chr3L 13525169 intergenic not near genes chr3L 13529094 intergenic not near genes chr3L 13533020 intergenic not near genes chr3L_5_13525001 chr3L_13525001 RAL-900_125b 2108 chr3L 13574580 13574616 chr3L 13580140 13580177 Rt1c 9 5560 14.0 4.0 9.0 0.9 5597 chr3L 13574580 intron bru-3 - chr3L 13577378 intron bru-3 - chr3L 13580177 intron bru-3 - chr3L_9_13575001 chr3L_13575001 RAL-900_125b 2109 chr3L 13626641 13626718 chr3L 13626775 13626852 19 133 4.5 6.5 5.5 2.9 211 chr3L 13626641 intron bru-3 - chr3L 13626746 intron bru-3 - chr3L 13626852 intron bru-3 - chr3L_19_13625001 chr3L_13625001 RAL-900_125b 2110 chr3L 13629477 13629541 chr3L 13629638 13629702 21 160 6.0 13.0 9.5 2.0 225 chr3L 13629477 intron bru-3 - chr3L 13629590 intron bru-3 - chr3L 13629702 intron bru-3 - chr3L_21_13625001 chr3L_13625001 RAL-900_125b 2111 chr3L 13633366 13633439 chr3L 13633769 13633842 20 401 4.0 4.5 4.2 3.8 476 chr3L 13633366 intron bru-3 - chr3L 13633604 intron bru-3 - chr3L 13633842 intron bru-3 - chr3L_20_13630001 chr3L_13630001 RAL-900_125b 2112 chr3L 13648845 13648917 chr3L 13648985 13649057 23 137 4.0 6.0 5.0 3.8 212 chr3L 13648845 intron bru-3 - chr3L 13648951 intron bru-3 - chr3L 13649057 intron bru-3 - chr3L_23_13645001 chr3L_13645001 RAL-900_125b 2113 chr3L 13677486 13677557 chr3L 13677605 13677684 30 125 10.0 5.0 7.5 3.5 198 chr3L 13677486 intron bru-3 - chr3L 13677585 intron bru-3 - chr3L 13677684 intron bru-3 - chr3L_30_13675001 chr3L_13675001 RAL-900_125b 2114 chr3L 13726741 13726763 chr3L 13726912 13726934 12 171 9.0 13.0 11.0 1.0 193 chr3L 13726741 intron bru-3 - chr3L 13726838 intron bru-3 - chr3L 13726934 intron bru-3 - chr3L_12_13725001 chr3L_13725001 RAL-900_125b 2115 chr3L 13774595 13774665 chr3L 13774724 13774801 23 133 7.0 6.5 6.8 2.9 206 chr3L 13774595 intron bru-3 - chr3L 13774698 intron bru-3 - chr3L 13774801 intron bru-3 - chr3L_23_13770001 chr3L_13770001 RAL-900_125b 2116 chr3L 13804504 13804564 chr3L 13822840 13822900 roo 21 18335 12.0 11.5 11.8 1.6 18396 chr3L 13804504 intergenic not near genes chr3L 13813702 intergenic not near genes chr3L 13822900 intergenic not near genes chr3L_21_13810001 chr3L_13810001 RAL-900_125b 2117 chr3L 13837269 13837297 chr3L 13837356 13837424 11 123 2.5 10.0 6.2 1.5 155 chr3L 13837269 intergenic CG43184 + chr3L 13837346 intergenic CG43184 + chr3L 13837424 intergenic CG43184 + chr3L_11_13835001 chr3L_13835001 RAL-900_125b 2118 chr3L 13841123 13841158 chr3L 13841264 13841295 8 140 0.0 15.0 7.5 0.9 172 chr3L 13841123 3` UTR CG8757 - chr3L 13841209 3` UTR CG8757 - chr3L 13841295 exon CG8757 - chr3L_8_13840001 chr3L_13840001 RAL-900_125b 2119 chr3L 13901528 13901584 chr3L 13901655 13901711 24 126 8.5 3.5 6.0 3.4 183 chr3L 13901528 intron dysc - chr3L 13901620 intron dysc - chr3L 13901711 5` UTR dysc - chr3L_24_13900001 chr3L_13900001 RAL-900_125b 2120 chr3L 13920371 13920432 chr3L 13920501 13920562 27 130 5.5 7.5 6.5 3.6 191 chr3L 13920371 intron Rgl - chr3L 13920466 intron Rgl - chr3L 13920562 intron Rgl - chr3L_27_13920001 chr3L_13920001 RAL-900_125b 2121 chr3L 13931286 13931368 chr3L 13931441 13931523 15 155 7.0 6.0 6.5 2.0 237 chr3L 13931286 intron Gl + chr3L 13931404 intron Gl + chr3L 13931523 intron Gl + chr3L_15_13930001 chr3L_13930001 RAL-900_125b 2122 chr3L 13993959 13993971 chr3L 13994089 13994101 5 130 1.5 4.0 2.8 1.3 142 chr3L 13993959 intergenic 26-29-p + chr3L 13994030 intergenic 26-29-p + chr3L 13994101 intergenic 26-29-p + chr3L_5_13990001 chr3L_13990001 RAL-900_125b 2123 chr3L 13994000 13994016 chr3L 13994131 13994147 11 131 1.5 11.0 6.2 1.5 147 chr3L 13994000 intergenic 26-29-p + chr3L 13994074 intergenic 26-29-p + chr3L 13994147 intergenic 26-29-p + chr3L_11_13990001 chr3L_13990001 RAL-900_125b 2124 chr3L 14076025 14076105 chr3L 14076154 14076234 36 129 12.0 0.0 6.0 5.1 209 chr3L 14076025 3` UTR,5` UTR Pex1 +,btl + chr3L 14076130 intron btl + chr3L 14076234 intron btl + chr3L_36_14075001 chr3L_14075001 RAL-900_125b 2125 chr3L 14107214 14107277 chr3L 14107341 14107404 18 127 13.0 2.5 7.8 2.0 190 chr3L 14107214 intron Sox21a - chr3L 14107309 intron Sox21a - chr3L 14107404 intron Sox21a - chr3L_18_14105001 chr3L_14105001 RAL-900_125b 2126 chr3L 14118898 14118950 chr3L 14119040 14119093 19 134 12.5 5.5 9.0 1.9 195 chr3L 14118898 intron Sox21b - chr3L 14118996 intron Sox21b - chr3L 14119093 intron Sox21b - chr3L_19_14115001 chr3L_14115001 RAL-900_125b 2127 chr3L 14118951 14118972 chr3L 14119039 14119115 16 125 8.5 5.5 7.0 2.0 164 chr3L 14118951 intron Sox21b - chr3L 14119033 intron Sox21b - chr3L 14119115 intron Sox21b - chr3L_16_14115001 chr3L_14115001 RAL-900_125b 2128 chr3L 14141360 14141377 chr3L 14141497 14141514 6 137 13.0 0.0 6.5 0.8 154 chr3L 14141360 intergenic not near genes chr3L 14141437 intergenic not near genes chr3L 14141514 intergenic not near genes chr3L_6_14140001 chr3L_14140001 RAL-900_125b 2129 chr3L 14168294 14168316 chr3L 14168425 14168437 13 130 5.5 0.0 2.8 3.4 143 chr3L 14168294 intergenic not near genes chr3L 14168366 intergenic not near genes chr3L 14168437 intergenic not near genes chr3L_13_14165001 chr3L_14165001 RAL-900_125b 2130 chr3L 14174073 14174092 chr3L 14174199 14174218 13 126 20.0 13.0 16.5 0.7 145 chr3L 14174073 intergenic not near genes chr3L 14174146 intergenic not near genes chr3L 14174218 intergenic not near genes chr3L_13_14170001 chr3L_14170001 RAL-900_125b 2131 chr3L 14185114 14185185 chr3L 14185240 14185311 23 125 16.5 6.5 11.5 1.8 197 chr3L 14185114 intergenic not near genes chr3L 14185212 intergenic not near genes chr3L 14185311 intergenic not near genes chr3L_23_14185001 chr3L_14185001 RAL-900_125b 2132 chr3L 14194677 14194733 chr3L 14194803 14194859 19 126 11.0 2.0 6.5 2.5 182 chr3L 14194677 intron nuf + chr3L 14194768 intron nuf + chr3L 14194859 intron nuf + chr3L_19_14190001 chr3L_14190001 RAL-900_125b 2133 chr3L 14234797 14234854 chr3L 14234944 14235001 31 147 10.0 4.0 7.0 3.9 204 chr3L 14234797 intergenic CG7924 +,CG34244 - chr3L 14234899 intergenic CG34244 -,CG7924 + chr3L 14235001 intergenic CG34244 -,CG7924 + chr3L_31_14230001 chr3L_14230001 RAL-900_125b 2134 chr3L 14239945 14240006 chr3L 14240086 14240153 24 145 4.5 6.0 5.2 3.9 208 chr3L 14239945 intergenic not near genes chr3L 14240049 intergenic not near genes chr3L 14240153 intergenic not near genes chr3L_24_14240001 chr3L_14240001 RAL-900_125b 2135 chr3L 14245542 14245549 chr3L 14245686 14245693 1360 5 144 16.5 12.0 14.2 0.3 151 chr3L 14245542 3` UTR CR44561 - chr3L 14245618 3` UTR CR44561 - chr3L 14245693 intergenic CR44561 -,CR44560 + chr3L_5_14245001 chr3L_14245001 RAL-900_125b 2136 chr3L 14245550 14245590 chr3L 14245683 14245734 1360 20 141 9.0 11.5 10.2 1.8 184 chr3L 14245550 3` UTR CR44561 - chr3L 14245642 3` UTR CR44561 - chr3L 14245734 intergenic CR44561 -,CR44560 + chr3L_20_14245001 chr3L_14245001 RAL-900_125b 2137 chr3L 14267149 14267227 chr3L 14267277 14267316 36 120 7.0 6.5 6.8 4.6 167 chr3L 14267149 intergenic not near genes chr3L 14267232 intergenic not near genes chr3L 14267316 intergenic not near genes chr3L_36_14265001 chr3L_14265001 RAL-900_125b 2138 chr3L 14295945 14296004 chr3L 14296472 14296535 roo 22 534 6.5 10.5 8.5 2.3 590 chr3L 14295945 intron fz + chr3L 14296240 intron fz + chr3L 14296535 intron fz + chr3L_22_14295001 chr3L_14295001 RAL-900_125b 2139 chr3L 14312005 14312055 chr3L 14316840 14316879 X-element 28 4854 7.0 4.5 5.8 4.1 4874 chr3L 14312005 exon fz + chr3L 14314442 intron fz + chr3L 14316879 intron fz + chr3L_28_14310001 chr3L_14310001 RAL-900_125b 2140 chr3L 14332711 14332773 chr3L 14332853 14332915 37 142 6.0 7.0 6.5 4.9 204 chr3L 14332711 intron fz + chr3L 14332813 intron fz + chr3L 14332915 intron fz + chr3L_37_14330001 chr3L_14330001 RAL-900_125b 2141 chr3L 14341397 14341439 chr3L 14341582 14341622 18 185 0.5 14.0 7.2 2.2 225 chr3L 14341397 intron fz + chr3L 14341510 intron fz + chr3L 14341622 intron fz + chr3L_18_14340001 chr3L_14340001 RAL-900_125b 2142 chr3L 14369978 14370009 chr3L 14370104 14370140 12 129 17.5 9.5 13.5 0.8 162 chr3L 14369978 intergenic CG13481 - chr3L 14370059 intergenic CG13481 - chr3L 14370140 intergenic CG13481 - chr3L_12_14370001 chr3L_14370001 RAL-900_125b 2143 chr3L 14370012 14370042 chr3L 14370101 14370173 13 120 9.0 9.0 9.0 1.3 161 chr3L 14370012 intergenic CG13481 - chr3L 14370092 intergenic CG13481 - chr3L 14370173 intergenic CG13481 - chr3L_13_14370001 chr3L_14370001 RAL-900_125b 2144 chr3L 14411815 14411886 chr3L 14411944 14412015 34 128 7.5 5.0 6.2 4.7 200 chr3L 14411815 intron CG3919 + chr3L 14411915 intron CG3919 + chr3L 14412015 intron CG3919 + chr3L_34_14410001 chr3L_14410001 RAL-900_125b 2145 chr3L 14462879 14462910 chr3L 14463017 14463038 13 137 3.0 11.0 7.0 1.6 159 chr3L 14462879 intron bbg - chr3L 14462958 intron bbg - chr3L 14463038 intron bbg - chr3L_13_14460001 chr3L_14460001 RAL-900_125b 2146 chr3L 14468405 14468469 chr3L 14473661 14473725 copia 24 5256 10.5 6.5 8.5 2.5 5320 chr3L 14468405 intron bbg - chr3L 14471065 intron bbg - chr3L 14473725 intron bbg - chr3L_24_14470001 chr3L_14470001 RAL-900_125b 2147 chr3L 14485970 14486049 chr3L 14486101 14486180 23 130 7.0 6.0 6.5 3.1 210 chr3L 14485970 intron bbg - chr3L 14486075 intron bbg - chr3L 14486180 intron bbg - chr3L_23_14485001 chr3L_14485001 RAL-900_125b 2148 chr3L 14543590 14543663 chr3L 14543785 14543858 27 193 4.0 5.0 4.5 4.9 268 chr3L 14543590 intron CG9238 - chr3L 14543724 intron CG9238 - chr3L 14543858 intron CG9238 - chr3L_27_14540001 chr3L_14540001 RAL-900_125b 2149 chr3L 14546565 14546811 chr3L 14546696 14546942 39 131 6.5 6.0 6.2 5.4 377 chr3L 14546565 intron CG9238 - chr3L 14546754 intron CG9238 - chr3L 14546942 intron CG9238 - chr3L_39_14545001 chr3L_14545001 RAL-900_125b 2150 chr3L 14549519 14549587 chr3L 14549663 14549731 26 144 8.5 9.5 9.0 2.6 212 chr3L 14549519 intron CG9238 - chr3L 14549625 intron CG9238 - chr3L 14549731 intron CG9238 - chr3L_26_14545001 chr3L_14545001 RAL-900_125b 2151 chr3L 14596169 14596200 chr3L 14596315 14596346 9 145 13.5 0.0 6.8 1.2 177 chr3L 14596169 intron HGTX - chr3L 14596258 intron HGTX - chr3L 14596346 intron HGTX - chr3L_9_14595001 chr3L_14595001 RAL-900_125b 2152 chr3L 14602923 14603082 chr3L 14603061 14603209 19 140 0.0 0.0 0.0 19.0 286 chr3L 14602923 intergenic not near genes chr3L 14603066 intergenic not near genes chr3L 14603209 intergenic not near genes chr3L_19_14600001 chr3L_14600001 RAL-900_125b 2153 chr3L 14618353 14618424 chr3L 14618618 14618689 39 263 6.0 6.5 6.2 5.4 336 chr3L 14618353 intron shd + chr3L 14618521 intron shd + chr3L 14618689 intron shd + chr3L_39_14615001 chr3L_14615001 RAL-900_125b 2154 chr3L 14635659 14635731 chr3L 14635788 14635860 29 129 8.0 6.5 7.2 3.5 201 chr3L 14635659 intron dlp + chr3L 14635760 intron dlp + chr3L 14635860 intron dlp + chr3L_29_14635001 chr3L_14635001 RAL-900_125b 2155 chr3L 14702004 14702020 chr3L 14702133 14702149 9 129 5.0 19.5 12.2 0.7 145 chr3L 14702004 intron ome + chr3L 14702076 intron ome + chr3L 14702149 intron ome + chr3L_9_14700001 chr3L_14700001 RAL-900_125b 2156 chr3L 14719739 14719809 chr3L 14719872 14719942 23 129 5.0 7.5 6.2 3.2 203 chr3L 14719739 intron ome + chr3L 14719840 intron ome + chr3L 14719942 intron ome + chr3L_23_14715001 chr3L_14715001 RAL-900_125b 2157 chr3L 14721145 14721200 chr3L 14723038 14723092 Rt1c 15 1889 14.0 8.5 11.2 1.2 1947 chr3L 14721145 intron ome + chr3L 14722118 intron ome + chr3L 14723092 intron ome + chr3L_15_14720001 chr3L_14720001 RAL-900_125b 2158 chr3L 14725561 14725615 chr3L 14728605 14728659 Doc 23 3043 14.5 12.5 13.5 1.6 3098 chr3L 14725561 intron ome + chr3L 14727110 intron ome + chr3L 14728659 intron ome + chr3L_23_14725001 chr3L_14725001 RAL-900_125b 2159 chr3L 14783893 14783958 chr3L 14784055 14784120 25 159 11.5 10.0 10.8 2.1 227 chr3L 14783893 intron bmm - chr3L 14784006 intron bmm - chr3L 14784120 intron bmm - chr3L_25_14780001 chr3L_14780001 RAL-900_125b 2160 chr3L 14820518 14820560 chr3L 14820651 14820693 13 133 17.0 0.0 8.5 1.4 175 chr3L 14820518 intron CG17839 + chr3L 14820606 intron CG17839 + chr3L 14820693 intron CG17839 + chr3L_13_14820001 chr3L_14820001 RAL-900_125b 2161 chr3L 14838987 14839040 chr3L 14839126 14839179 26 139 8.0 12.5 10.2 2.3 192 chr3L 14838987 intron CG17839 + chr3L 14839083 intron CG17839 + chr3L 14839179 intron CG17839 + chr3L_26_14835001 chr3L_14835001 RAL-900_125b 2162 chr3L 14912142 14912206 chr3L 14912274 14912338 21 130 13.0 8.0 10.5 1.8 196 chr3L 14912142 intron DCX-EMAP + chr3L 14912240 intron DCX-EMAP + chr3L 14912338 intron DCX-EMAP + chr3L_21_14910001 chr3L_14910001 RAL-900_125b 2163 chr3L 14933395 14933453 chr3L 14933527 14933585 22 132 10.0 15.5 12.8 1.6 190 chr3L 14933395 intron DCX-EMAP + chr3L 14933490 intron DCX-EMAP + chr3L 14933585 intron DCX-EMAP + chr3L_22_14930001 chr3L_14930001 RAL-900_125b 2164 chr3L 14957952 14957971 chr3L 14958084 14958103 12 132 7.0 0.0 3.5 2.7 151 chr3L 14957952 intergenic not near genes chr3L 14958028 intergenic not near genes chr3L 14958103 intergenic not near genes chr3L_12_14955001 chr3L_14955001 RAL-900_125b 2165 chr3L 14970714 14970765 chr3L 14971074 14971125 F-element 30 360 14.0 10.5 12.2 2.3 411 chr3L 14970714 intergenic Tom + chr3L 14970920 intergenic not near genes chr3L 14971125 intergenic not near genes chr3L_30_14970001 chr3L_14970001 RAL-900_125b 2166 chr3L 15048124 15048174 chr3L 15048438 15048495 23 314 69.5 60.0 64.8 0.3 371 chr3L 15048124 intron Sytbeta - chr3L 15048310 intron Sytbeta - chr3L 15048495 intron Sytbeta - chr3L_23_15045001 chr3L_15045001 RAL-900_125b 2167 chr3L 15084732 15084739 chr3L 15084862 15084869 6 130 9.0 20.0 14.5 0.4 137 chr3L 15084732 intron cp309 - chr3L 15084800 intron cp309 - chr3L 15084869 intron cp309 - chr3L_6_15080001 chr3L_15080001 RAL-900_125b 2168 chr3L 15085004 15085081 chr3L 15086220 15086291 1360 40 1215 6.5 6.5 6.5 5.3 1287 chr3L 15085004 intron cp309 - chr3L 15085648 intron cp309 - chr3L 15086291 intron cp309 - chr3L_40_15085001 chr3L_15085001 RAL-900_125b 2169 chr3L 15088022 15088025 chr3L 15090826 15090829 4 2804 12.0 26.5 19.2 0.2 2807 chr3L 15088022 intron cp309 - chr3L 15089426 intron cp309 - chr3L 15090829 intron,3` UTR cp309 -,CG6945 - chr3L_4_15085001 chr3L_15085001 RAL-900_125b 2170 chr3L 15094924 15094960 chr3L 15095070 15095106 18 146 13.0 9.0 11.0 1.5 182 chr3L 15094924 intergenic cp309 -,CG6945 -,Aats-gly + chr3L 15095015 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095106 intergenic Aats-gly +,cp309 -,CG6945 - chr3L_18_15095001 chr3L_15095001 RAL-900_125b 2171 chr3L 15164987 15165003 chr3L 15165135 15165151 11 148 12.5 0.0 6.2 1.5 164 chr3L 15164987 intergenic not near genes chr3L 15165069 intergenic not near genes chr3L 15165151 intergenic not near genes chr3L_11_15165001 chr3L_15165001 RAL-900_125b 2172 chr3L 15219697 15219770 chr3L 15219829 15219902 22 132 4.5 8.0 6.2 3.1 205 chr3L 15219697 intergenic not near genes chr3L 15219800 intergenic not near genes chr3L 15219902 intergenic not near genes chr3L_22_15215001 chr3L_15215001 RAL-900_125b 2173 chr3L 15231498 15231570 chr3L 15231625 15231697 17 121 12.0 9.0 10.5 1.5 199 chr3L 15231498 intergenic not near genes chr3L 15231598 intergenic not near genes chr3L 15231697 intergenic not near genes chr3L_17_15230001 chr3L_15230001 RAL-900_125b 2174 chr3L 15257385 15257449 chr3L 15257648 15257712 16 263 4.5 3.0 3.8 3.3 327 chr3L 15257385 intergenic not near genes chr3L 15257548 intergenic not near genes chr3L 15257712 intergenic not near genes chr3L_16_15255001 chr3L_15255001 RAL-900_125b 2175 chr3L 15264035 15264083 chr3L 15264162 15264212 10 128 0.0 0.0 0.0 10.0 177 chr3L 15264035 intergenic not near genes chr3L 15264124 intergenic not near genes chr3L 15264212 intergenic not near genes chr3L_10_15260001 chr3L_15260001 RAL-900_125b 2176 chr3L 15267496 15267559 chr3L 15267623 15267686 17 126 5.0 5.5 5.2 2.7 190 chr3L 15267496 intergenic not near genes chr3L 15267591 intergenic not near genes chr3L 15267686 intergenic not near genes chr3L_17_15265001 chr3L_15265001 RAL-900_125b 2177 chr3L 15281960 15282001 chr3L 15282151 15282192 9 191 0.5 11.5 6.0 1.3 232 chr3L 15281960 intergenic not near genes chr3L 15282076 intergenic not near genes chr3L 15282192 intergenic not near genes chr3L_9_15280001 chr3L_15280001 RAL-900_125b 2178 chr3L 15295722 15295796 chr3L 15298615 15298691 gypsy5 27 2893 8.5 10.0 9.2 2.6 2969 chr3L 15295722 intergenic not near genes chr3L 15297206 intergenic not near genes chr3L 15298691 intergenic Best4 + chr3L_27_15295001 chr3L_15295001 RAL-900_125b 2179 chr3L 15405976 15406046 chr3L 15406108 15406179 21 130 6.0 8.0 7.0 2.6 203 chr3L 15405976 intergenic not near genes chr3L 15406078 intergenic not near genes chr3L 15406179 intergenic not near genes chr3L_21_15405001 chr3L_15405001 RAL-900_125b 2180 chr3L 15423719 15423781 chr3L 15426613 15426675 opus 20 2894 5.5 1.0 3.2 4.8 2956 chr3L 15423719 intergenic not near genes chr3L 15425197 intergenic not near genes chr3L 15426675 intergenic not near genes chr3L_20_15425001 chr3L_15425001 RAL-900_125b 2181 chr3L 15444614 15444681 chr3L 15444758 15444825 32 142 4.5 7.5 6.0 4.6 211 chr3L 15444614 intergenic not near genes chr3L 15444720 intergenic not near genes chr3L 15444825 intergenic not near genes chr3L_32_15440001 chr3L_15440001 RAL-900_125b 2182 chr3L 10345583 10345585 chr3L 15447098 15447100 4 5101515 26.5 24.5 25.5 0.2 5101517 chr3L 10345583 intergenic not near genes chr3L 12896342 intergenic not near genes chr3L 15447100 intergenic not near genes chr3L_4_12895001 chr3L_12895001 RAL-900_125b 2183 chr3L 15450298 15450365 chr3L 15450436 15450495 17 130 4.5 2.5 3.5 3.8 197 chr3L 15450298 intergenic not near genes chr3L 15450396 intergenic not near genes chr3L 15450495 intergenic not near genes chr3L_17_15450001 chr3L_15450001 RAL-900_125b 2184 chr3L 15453654 15453715 chr3L 15453781 15453840 25 125 9.5 7.0 8.2 2.7 186 chr3L 15453654 intergenic not near genes chr3L 15453747 intergenic not near genes chr3L 15453840 intergenic not near genes chr3L_25_15450001 chr3L_15450001 RAL-900_125b 2185 chr3L 15474650 15474685 chr3L 15474839 15474874 9 188 6.0 1.5 3.8 1.9 224 chr3L 15474650 intergenic not near genes chr3L 15474762 intergenic not near genes chr3L 15474874 intergenic not near genes chr3L_9_15470001 chr3L_15470001 RAL-900_125b 2186 chr3L 15482553 15482627 chr3L 15482684 15482758 45 131 6.0 9.0 7.5 5.3 205 chr3L 15482553 intergenic not near genes chr3L 15482656 intergenic not near genes chr3L 15482758 intergenic not near genes chr3L_45_15480001 chr3L_15480001 RAL-900_125b 2187 chr3L 15493264 15493342 chr3L 15493409 15493487 10 145 5.0 0.0 2.5 2.9 223 chr3L 15493264 exon CG12355 - chr3L 15493376 intron CG12355 - chr3L 15493487 5` UTR CG12355 - chr3L_10_15490001 chr3L_15490001 RAL-900_125b 2188 chr3L 15539263 15539319 chr3L 15539377 15539448 24 119 8.0 7.0 7.5 2.8 185 chr3L 15539263 intron CrebA + chr3L 15539356 intron CrebA + chr3L 15539448 intron CrebA + chr3L_24_15535001 chr3L_15535001 RAL-900_125b 2189 chr3L 15541583 15541646 chr3L 15541724 15541787 27 141 9.0 1.0 5.0 4.5 204 chr3L 15541583 intron CrebA + chr3L 15541685 intron CrebA + chr3L 15541787 intron CrebA + chr3L_27_15540001 chr3L_15540001 RAL-900_125b 2190 chr3L 15600119 15600190 chr3L 15600254 15600341 15 150 9.0 0.0 4.5 2.7 222 chr3L 15600119 intron RhoGAP71E + chr3L 15600230 intron RhoGAP71E + chr3L 15600341 intron RhoGAP71E + chr3L_15_15600001 chr3L_15600001 RAL-900_125b 2191 chr3L 15617778 15617805 chr3L 15617998 15618050 8 239 0.5 10.5 5.5 1.2 272 chr3L 15617778 intron comm3 - chr3L 15617914 intron comm3 - chr3L 15618050 intron comm3 - chr3L_8_15615001 chr3L_15615001 RAL-900_125b 2192 chr3L 15629851 15629911 chr3L 15630025 15630085 19 174 10.5 6.0 8.2 2.1 234 chr3L 15629851 intron comm3 - chr3L 15629968 intron comm3 - chr3L 15630085 intron comm3 - chr3L_19_15625001 chr3L_15625001 RAL-900_125b 2193 chr3L 15641735 15641811 chr3L 15641870 15641946 11 132 0.0 7.0 3.5 2.4 211 chr3L 15641735 intron comm3 - chr3L 15641840 intron comm3 - chr3L 15641946 intron comm3 - chr3L_11_15640001 chr3L_15640001 RAL-900_125b 2194 chr3L 15691382 15691441 chr3L 15691514 15691573 25 131 0.0 9.5 4.8 4.3 191 chr3L 15691382 intron CG34451 - chr3L 15691478 intron CG34451 - chr3L 15691573 intron CG34451 - chr3L_25_15690001 chr3L_15690001 RAL-900_125b 2195 chr3L 15754431 15754605 chr3L 15754573 15754738 34 136 0.0 0.5 0.2 28.3 307 chr3L 15754431 intergenic not near genes chr3L 15754584 intergenic not near genes chr3L 15754738 intergenic not near genes chr3L_34_15750001 chr3L_15750001 RAL-900_125b 2196 chr3L 15769112 15769123 chr3L 15769255 15769266 4 143 6.5 9.5 8.0 0.4 154 chr3L 15769112 intergenic not near genes chr3L 15769189 intergenic not near genes chr3L 15769266 intergenic not near genes chr3L_4_15765001 chr3L_15765001 RAL-900_125b 2197 chr3L 15774854 15774884 chr3L 15774994 15775023 15 140 6.5 7.0 6.8 1.9 169 chr3L 15774854 intergenic not near genes chr3L 15774938 intergenic not near genes chr3L 15775023 intergenic not near genes chr3L_15_15770001 chr3L_15770001 RAL-900_125b 2198 chr3L 15781604 15781687 chr3L 15781785 15781886 11 192 2.5 0.0 1.2 5.0 282 chr3L 15781604 intergenic not near genes chr3L 15781745 intergenic not near genes chr3L 15781886 intergenic not near genes chr3L_11_15780001 chr3L_15780001 RAL-900_125b 2199 chr3L 15840419 15840466 chr3L 15840557 15840601 13 137 5.0 10.5 7.8 1.5 182 chr3L 15840419 intron CG32150 - chr3L 15840510 intron CG32150 - chr3L 15840601 intron CG32150 - chr3L_13_15840001 chr3L_15840001 RAL-900_125b 2200 chr3L 15843034 15843050 chr3L 15843225 15843242 7 192 0.0 17.0 8.5 0.7 208 chr3L 15843034 intron CG32150 - chr3L 15843138 intron CG32150 - chr3L 15843242 intron CG32150 - chr3L_7_15840001 chr3L_15840001 RAL-900_125b 2201 chr3L 15844576 15844641 chr3L 15844703 15844768 28 126 9.5 9.5 9.5 2.7 192 chr3L 15844576 intergenic not near genes chr3L 15844672 intergenic not near genes chr3L 15844768 intergenic not near genes chr3L_28_15840001 chr3L_15840001 RAL-900_125b 2202 chr3L 15871545 15871615 chr3L 15871679 15871742 23 133 9.5 0.0 4.8 4.0 197 chr3L 15871545 intron pHCl - chr3L 15871644 intron pHCl - chr3L 15871742 intron pHCl - chr3L_23_15870001 chr3L_15870001 RAL-900_125b 2203 chr3L 15899206 15899246 chr3L 15899798 15899863 jockey 12 604 5.5 5.5 5.5 1.8 657 chr3L 15899206 intergenic pHCl - chr3L 15899534 intergenic not near genes chr3L 15899863 intergenic sff - chr3L_12_15895001 chr3L_15895001 RAL-900_125b 2204 chr3L 15907479 15907513 chr3L 15908583 15908620 8 1108 0.0 14.5 7.2 1.0 1141 chr3L 15907479 intron sff - chr3L 15908050 intron sff - chr3L 15908620 intron sff - chr3L_8_15905001 chr3L_15905001 RAL-900_125b 2205 chr3L 15929148 15929175 chr3L 15938341 15938368 roo 13 9192 8.0 7.5 7.8 1.5 9220 chr3L 15929148 intron Pka-C3 - chr3L 15933758 intron Pka-C3 - chr3L 15938368 intron Pka-C3 - chr3L_13_15930001 chr3L_15930001 RAL-900_125b 2206 chr3L 15949995 15950020 chr3L 15950128 15950153 12 133 15.0 8.0 11.5 1.0 158 chr3L 15949995 intron Pka-C3 - chr3L 15950074 intron Pka-C3 - chr3L 15950153 intron Pka-C3 - chr3L_12_15950001 chr3L_15950001 RAL-900_125b 2207 chr3L 15950021 15950055 chr3L 15950123 15950180 16 124 9.0 6.5 7.8 1.8 159 chr3L 15950021 intron Pka-C3 - chr3L 15950100 intron Pka-C3 - chr3L 15950180 intron Pka-C3 - chr3L_16_15950001 chr3L_15950001 RAL-900_125b 2208 chr3L 15960758 15960779 chr3L 15960932 15960952 9 173 11.0 6.0 8.5 0.9 194 chr3L 15960758 intergenic l(3)72Ab -,CG17032 + chr3L 15960855 3` UTR l(3)72Ab - chr3L 15960952 3` UTR l(3)72Ab - chr3L_9_15960001 chr3L_15960001 RAL-900_125b 2209 chr3L 15966540 15966542 chr3L 15968879 15968881 5 2339 57.5 77.5 67.5 0.1 2341 chr3L 15966540 exon l(3)72Ab - chr3L 15967710 exon l(3)72Ab - chr3L 15968881 intron CG10516 + chr3L_5_15965001 chr3L_15965001 RAL-900_125b 2210 chr3L 15966532 15966538 chr3L 15968882 15968948 53 2345 56.5 74.5 65.5 0.8 2416 chr3L 15966532 exon l(3)72Ab - chr3L 15967740 exon l(3)72Ab - chr3L 15968948 intron CG10516 + chr3L_53_15965001 chr3L_15965001 RAL-900_125b 2211 chr3L 15981637 15981707 chr3L 15981773 15981843 17 136 8.0 13.0 10.5 1.5 206 chr3L 15981637 intron,3` UTR brm -,CG17027 + chr3L 15981740 intron,3` UTR brm -,CG17027 + chr3L 15981843 intron,3` UTR brm -,CG17027 + chr3L_17_15980001 chr3L_15980001 RAL-900_125b 2212 chr3L 15989185 15989227 chr3L 15989318 15989360 13 133 5.0 8.5 6.8 1.7 175 chr3L 15989185 exon Hip14 + chr3L 15989272 intron Hip14 + chr3L 15989360 intron Hip14 + chr3L_13_15985001 chr3L_15985001 RAL-900_125b 2213 chr3L 16047736 16047768 chr3L 16047865 16047897 13 129 0.0 10.5 5.2 2.1 161 chr3L 16047736 intron th - chr3L 16047816 intron th - chr3L 16047897 intron th - chr3L_13_16045001 chr3L_16045001 RAL-900_125b 2214 chr3L 16162585 16162598 chr3L 16162689 16162732 7 130 15.0 12.5 13.8 0.5 147 chr3L 16162585 intron CG5151 - chr3L 16162658 intron CG5151 - chr3L 16162732 intron CG5151 - chr3L_7_16160001 chr3L_16160001 RAL-900_125b 2215 chr3L 16162600 16162621 chr3L 16162683 16162755 12 126 9.0 12.0 10.5 1.0 155 chr3L 16162600 intron CG5151 - chr3L 16162678 intron CG5151 - chr3L 16162755 intron CG5151 - chr3L_12_16160001 chr3L_16160001 RAL-900_125b 2216 chr3L 16184065 16184134 chr3L 16188934 16189002 X-element 29 4868 3.5 8.0 5.8 4.3 4937 chr3L 16184065 intergenic not near genes chr3L 16186534 intergenic not near genes chr3L 16189002 intergenic not near genes chr3L_29_16185001 chr3L_16185001 RAL-900_125b 2217 chr3L 16239889 16239949 chr3L 16240015 16240075 28 125 10.5 11.0 10.8 2.4 186 chr3L 16239889 intergenic l(3)72Dr + chr3L 16239982 intergenic not near genes chr3L 16240075 intergenic not near genes chr3L_28_16235001 chr3L_16235001 RAL-900_125b 2218 chr3L 16240713 16240779 chr3L 16240895 16240961 7 182 1.0 13.5 7.2 0.9 248 chr3L 16240713 intergenic not near genes chr3L 16240837 intergenic not near genes chr3L 16240961 intergenic not near genes chr3L_7_16240001 chr3L_16240001 RAL-900_125b 2219 chr3L 16243640 16243679 chr3L 16243781 16243820 19 140 0.0 10.5 5.2 3.1 180 chr3L 16243640 intergenic not near genes chr3L 16243730 intergenic not near genes chr3L 16243820 intergenic not near genes chr3L_19_16240001 chr3L_16240001 RAL-900_125b 2220 chr3L 16258347 16258364 chr3L 16258482 16258500 7 134 24.5 11.0 17.8 0.4 153 chr3L 16258347 intergenic not near genes chr3L 16258424 intergenic not near genes chr3L 16258500 intergenic not near genes chr3L_7_16255001 chr3L_16255001 RAL-900_125b 2221 chr3L 16258365 16258417 chr3L 16258476 16258496 19 127 11.0 10.0 10.5 1.7 131 chr3L 16258365 intergenic not near genes chr3L 16258430 intergenic not near genes chr3L 16258496 intergenic not near genes chr3L_19_16255001 chr3L_16255001 RAL-900_125b 2222 chr3L 16304814 16304892 chr3L 16304942 16305020 37 127 10.5 9.5 10.0 3.4 206 chr3L 16304814 intergenic CG43249 +,CG13043 - chr3L 16304917 intergenic CG43249 +,CG13043 - chr3L 16305020 intergenic CG13043 -,CG43249 + chr3L_37_16300001 chr3L_16300001 RAL-900_125b 2223 chr3L 16311186 16311252 chr3L 16311334 16311400 29 148 8.5 6.5 7.5 3.4 214 chr3L 16311186 5` UTR CR32160 + chr3L 16311293 5` UTR CR32160 + chr3L 16311400 intergenic CR32160 + chr3L_29_16310001 chr3L_16310001 RAL-900_125b 2224 chr3L 16340217 16340288 chr3L 16340390 16340462 23 173 7.0 7.5 7.2 2.8 245 chr3L 16340217 intron CG4998 + chr3L 16340340 intron CG4998 + chr3L 16340462 exon CG4998 + chr3L_23_16340001 chr3L_16340001 RAL-900_125b 2225 chr3L 16359905 16360001 chr3L 16360225 16360262 24 317 0.0 9.5 4.8 4.1 357 chr3L 16359905 intron CG45057 - chr3L 16360084 intron CG45057 - chr3L 16360262 intron CG45057 - chr3L_24_16360001 chr3L_16360001 RAL-900_125b 2226 chr3L 16360842 16360908 chr3L 16360970 16361036 26 127 16.0 10.5 13.2 1.8 194 chr3L 16360842 intron CG45057 - chr3L 16360939 intron CG45057 - chr3L 16361036 intron CG45057 - chr3L_26_16360001 chr3L_16360001 RAL-900_125b 2227 chr3L 16443798 16443874 chr3L 16446188 16446264 Doc 29 2390 8.5 8.0 8.2 3.2 2466 chr3L 16443798 intron,intron CG33158 +,dsx-c73A - chr3L 16445031 intron,intron CG33158 +,dsx-c73A - chr3L 16446264 intron,intron CG33158 +,dsx-c73A - chr3L_29_16445001 chr3L_16445001 RAL-900_125b 2228 chr3L 16446441 16446473 chr3L 16446595 16446627 17 154 10.0 15.0 12.5 1.3 186 chr3L 16446441 intron,intron CG33158 +,dsx-c73A - chr3L 16446534 intron,intron CG33158 +,dsx-c73A - chr3L 16446627 intron,intron CG33158 +,dsx-c73A - chr3L_17_16445001 chr3L_16445001 RAL-900_125b 2229 chr3L 16457478 16457540 chr3L 16457624 16457685 24 145 10.5 3.5 7.0 3.0 207 chr3L 16457478 intron CG33158 + chr3L 16457582 intron CG33158 + chr3L 16457685 intron CG33158 + chr3L_24_16455001 chr3L_16455001 RAL-900_125b 2230 chr3L 16458221 16458286 chr3L 16458384 16458450 16 162 10.0 3.5 6.8 2.1 229 chr3L 16458221 intron CG33158 + chr3L 16458336 intron CG33158 + chr3L 16458450 intron CG33158 + chr3L_16_16455001 chr3L_16455001 RAL-900_125b 2231 chr3L 16458713 16458771 chr3L 16458843 16458891 19 127 9.0 9.0 9.0 1.9 178 chr3L 16458713 intron CG33158 + chr3L 16458802 intron CG33158 + chr3L 16458891 intron CG33158 + chr3L_19_16455001 chr3L_16455001 RAL-900_125b 2232 chr3L 16493942 16494009 chr3L 16494509 16494557 jockey 29 566 6.0 13.5 9.8 2.7 615 chr3L 16493942 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494250 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494557 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_29_16490001 chr3L_16490001 RAL-900_125b 2233 chr3L 16533523 16533587 chr3L 16533684 16533748 16 161 0.0 9.5 4.8 2.8 225 chr3L 16533523 intron CG43373 - chr3L 16533636 intron CG43373 - chr3L 16533748 intron CG43373 - chr3L_16_16530001 chr3L_16530001 RAL-900_125b 2234 chr3L 16540013 16540070 chr3L 16540151 16540208 33 137 10.0 7.5 8.8 3.4 195 chr3L 16540013 intron CG43373 - chr3L 16540110 intron CG43373 - chr3L 16540208 intron CG43373 - chr3L_33_16540001 chr3L_16540001 RAL-900_125b 2235 chr3L 16563182 16563257 chr3L 16563313 16563403 11 132 7.5 0.0 3.8 2.3 221 chr3L 16563182 intergenic Mipp1 - chr3L 16563292 intergenic Mipp1 - chr3L 16563403 intergenic Mipp1 - chr3L_11_16560001 chr3L_16560001 RAL-900_125b 2236 chr3L 16616466 16616535 chr3L 16621844 16621913 297 36 5377 12.0 11.0 11.5 2.9 5447 chr3L 16616466 3` UTR Abl - chr3L 16619190 3` UTR Abl - chr3L 16621913 3` UTR Abl - chr3L_36_16615001 chr3L_16615001 RAL-900_125b 2237 chr3L 16638729 16638798 chr3L 16638859 16638928 27 129 9.0 5.5 7.2 3.3 199 chr3L 16638729 intron Abl - chr3L 16638828 intron Abl - chr3L 16638928 intron Abl - chr3L_27_16635001 chr3L_16635001 RAL-900_125b 2238 chr3L 16643296 16643361 chr3L 16643424 16643469 23 126 5.5 6.0 5.8 3.4 173 chr3L 16643296 intron Abl - chr3L 16643382 intron Abl - chr3L 16643469 intron Abl - chr3L_23_16640001 chr3L_16640001 RAL-900_125b 2239 chr3L 16648844 16648898 chr3L 16648998 16649052 20 154 6.5 14.5 10.5 1.7 208 chr3L 16648844 3` UTR Baldspot - chr3L 16648948 3` UTR Baldspot - chr3L 16649052 3` UTR Baldspot - chr3L_20_16645001 chr3L_16645001 RAL-900_125b 2240 chr3L 16659525 16659530 chr3L 16659656 16659661 4 131 5.0 0.0 2.5 1.1 136 chr3L 16659525 intron Baldspot - chr3L 16659593 intron Baldspot - chr3L 16659661 intron Baldspot - chr3L_4_16655001 chr3L_16655001 RAL-900_125b 2241 chr3L 16683980 16684040 chr3L 16689251 16689309 copia 27 5271 7.0 10.0 8.5 2.8 5329 chr3L 16683980 intron,intron Lasp -,CG43954 - chr3L 16686644 intron,intron Lasp -,CG43954 - chr3L 16689309 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_27_16685001 chr3L_16685001 RAL-900_125b 2242 chr3L 16772448 16772512 chr3L 16772588 16772652 23 139 12.0 9.0 10.5 2.0 204 chr3L 16772448 intron Nrt + chr3L 16772550 intron Nrt + chr3L 16772652 intron Nrt + chr3L_23_16770001 chr3L_16770001 RAL-900_125b 2243 chr3L 16786982 16786993 chr3L 16787108 16787119 8 126 1.0 14.5 7.8 0.9 137 chr3L 16786982 intergenic Int6 - chr3L 16787050 intergenic Int6 - chr3L 16787119 intergenic Int6 -,CG9674 - chr3L_8_16785001 chr3L_16785001 RAL-900_125b 2244 chr3L 16817828 16817902 chr3L 16818018 16818067 36 186 9.0 6.5 7.8 4.1 239 chr3L 16817828 intron,intron nudC +,CG13024 - chr3L 16817948 intron,intron nudC +,CG13024 - chr3L 16818067 intron,intron nudC +,CG13024 - chr3L_36_16815001 chr3L_16815001 RAL-900_125b 2245 chr3L 16818701 16818775 chr3L 16818827 16818901 25 126 8.5 10.0 9.2 2.5 200 chr3L 16818701 intron,intron nudC +,CG13024 - chr3L 16818801 intron,intron nudC +,CG13024 - chr3L 16818901 intron,intron nudC +,CG13024 - chr3L_25_16815001 chr3L_16815001 RAL-900_125b 2246 chr3L 16821247 16821288 chr3L 16821383 16821405 19 132 12.0 10.5 11.2 1.6 158 chr3L 16821247 intron CG13024 - chr3L 16821326 intron CG13024 - chr3L 16821405 intron CG13024 - chr3L_19_16820001 chr3L_16820001 RAL-900_125b 2247 chr3L 16825333 16825346 chr3L 16825462 16825475 4 129 0.0 12.0 6.0 0.6 142 chr3L 16825333 intron CG13024 - chr3L 16825404 intron CG13024 - chr3L 16825475 intron CG13024 - chr3L_4_16825001 chr3L_16825001 RAL-900_125b 2248 chr3L 16844980 16845042 chr3L 16845143 16845205 23 163 8.0 16.0 12.0 1.8 225 chr3L 16844980 5` UTR CG9669 - chr3L 16845092 intergenic CG9669 -,CG9715 + chr3L 16845205 intergenic CG9715 +,CG9669 - chr3L_23_16845001 chr3L_16845001 RAL-900_125b 2249 chr3L 16873290 16873337 chr3L 16873444 16873467 11 152 6.0 8.0 7.0 1.4 177 chr3L 16873290 intron Lmpt + chr3L 16873378 intron Lmpt + chr3L 16873467 intron Lmpt + chr3L_11_16870001 chr3L_16870001 RAL-900_125b 2250 chr3L 16882272 16882297 chr3L 16882410 16882430 4 136 4.5 13.0 8.8 0.4 158 chr3L 16882272 intron Lmpt + chr3L 16882351 intron Lmpt + chr3L 16882430 intron Lmpt + chr3L_4_16880001 chr3L_16880001 RAL-900_125b 2251 chr3L 16894741 16894808 chr3L 16894869 16894943 6 132 8.0 0.0 4.0 1.2 202 chr3L 16894741 intron Lmpt + chr3L 16894842 intron Lmpt + chr3L 16894943 intron Lmpt + chr3L_6_16890001 chr3L_16890001 RAL-900_125b 2252 chr3L 16941353 16941385 chr3L 16941503 16941536 16 150 16.5 0.0 8.2 1.7 183 chr3L 16941353 intron Cpr73D - chr3L 16941444 intron Cpr73D - chr3L 16941536 intron Cpr73D - chr3L_16_16940001 chr3L_16940001 RAL-900_125b 2253 chr3L 16945686 16945758 chr3L 16954884 16954955 roo 26 9194 6.0 8.0 7.0 3.2 9269 chr3L 16945686 exon Obp73a + chr3L 16950320 intergenic not near genes chr3L 16954955 5` UTR Nc73EF + chr3L_26_16950001 chr3L_16950001 RAL-900_125b 2254 chr3L 17027127 17027188 chr3L 17027269 17027330 21 142 6.0 10.5 8.2 2.3 203 chr3L 17027127 intergenic Fit2 +,CG7730 + chr3L 17027228 intergenic Fit2 +,CG7730 + chr3L 17027330 intergenic CG7730 +,Fit2 + chr3L_21_17025001 chr3L_17025001 RAL-900_125b 2255 chr3L 17034887 17034963 chr3L 17035120 17035121 G2 27 231 11.5 7.5 9.5 2.6 234 chr3L 17034887 intergenic not near genes chr3L 17035004 intergenic not near genes chr3L 17035121 intergenic not near genes chr3L_27_17035001 chr3L_17035001 RAL-900_125b 2256 chr3L 17084960 17085027 chr3L 17094159 17094226 roo 29 9199 7.5 10.5 9.0 2.9 9266 chr3L 17084960 intron Rbp6 - chr3L 17089593 intron Rbp6 - chr3L 17094226 intron Rbp6 - chr3L_29_17085001 chr3L_17085001 RAL-900_125b 2257 chr3L 17110266 17110335 chr3L 17110397 17110466 9 129 7.0 8.5 7.8 1.0 200 chr3L 17110266 intron Rbp6 - chr3L 17110366 intron Rbp6 - chr3L 17110466 intron Rbp6 - chr3L_9_17110001 chr3L_17110001 RAL-900_125b 2258 chr3L 17120602 17120678 chr3L 17120728 17120804 42 126 8.0 9.0 8.5 4.4 202 chr3L 17120602 intron Rbp6 - chr3L 17120703 intron Rbp6 - chr3L 17120804 intron Rbp6 - chr3L_42_17120001 chr3L_17120001 RAL-900_125b 2259 chr3L 17144116 17144180 chr3L 17144250 17144314 25 134 8.0 7.5 7.8 2.8 198 chr3L 17144116 intron Rbp6 - chr3L 17144215 intron Rbp6 - chr3L 17144314 intron Rbp6 - chr3L_25_17140001 chr3L_17140001 RAL-900_125b 2260 chr3L 17149117 17149135 chr3L 17149248 17149266 9 130 16.5 0.0 8.2 1.0 149 chr3L 17149117 intron Rbp6 - chr3L 17149192 intron Rbp6 - chr3L 17149266 intron Rbp6 - chr3L_9_17145001 chr3L_17145001 RAL-900_125b 2261 chr3L 17205928 17205944 chr3L 18193423 18193423 5 987487 6.5 26.5 16.5 0.3 987495 chr3L 17205928 intron Rbp6 - chr3L 17699676 intron Ccn + chr3L 18193423 intergenic not near genes chr3L_5_17695001 chr3L_17695001 RAL-900_125b 2262 chr3L 17265310 17265333 chr3L 17265439 17265462 9 129 10.0 19.5 14.8 0.6 152 chr3L 17265310 intergenic CG13723 + chr3L 17265386 intergenic CG13723 + chr3L 17265462 intergenic CG13723 + chr3L_9_17265001 chr3L_17265001 RAL-900_125b 2263 chr3L 17431252 17431330 chr3L 17431388 17431466 41 135 5.5 5.5 5.5 6.3 214 chr3L 17431252 intron,3` UTR CG32174 -,frc - chr3L 17431359 intron,3` UTR CG32174 -,frc - chr3L 17431466 intron,3` UTR CG32174 -,frc - chr3L_41_17430001 chr3L_17430001 RAL-900_125b 2264 chr3L 17461971 17461997 chr3L 17462166 17462192 15 195 9.0 10.0 9.5 1.4 221 chr3L 17461971 intergenic not near genes chr3L 17462082 intergenic not near genes chr3L 17462192 intergenic not near genes chr3L_15_17460001 chr3L_17460001 RAL-900_125b 2265 chr3L 17506612 17506656 chr3L 17506721 17506786 21 127 10.5 9.5 10.0 1.9 174 chr3L 17506612 intron Oatp74D + chr3L 17506699 intron Oatp74D + chr3L 17506786 intron Oatp74D + chr3L_21_17505001 chr3L_17505001 RAL-900_125b 2266 chr3L 17510704 17510766 chr3L 17510818 17510860 31 131 4.5 4.5 4.5 5.6 156 chr3L 17510704 exon Oatp74D + chr3L 17510782 intron Oatp74D + chr3L 17510860 intron Oatp74D + chr3L_31_17510001 chr3L_17510001 RAL-900_125b 2267 chr3L 17516937 17517001 chr3L 17524545 17524556 412 29 7602 7.5 10.0 8.8 3.0 7619 chr3L 17516937 intron CG7564 + chr3L 17520746 intron CG7564 + chr3L 17524556 3` UTR CG7564 + chr3L_29_17520001 chr3L_17520001 RAL-900_125b 2268 chr3L 17578496 17578572 chr3L 17578647 17578724 16 152 6.5 0.0 3.2 3.8 228 chr3L 17578496 intron Eip74EF - chr3L 17578610 intron Eip74EF - chr3L 17578724 intron Eip74EF - chr3L_16_17575001 chr3L_17575001 RAL-900_125b 2269 chr3L 17580537 17580602 chr3L 17580763 17580777 16 223 10.5 0.0 5.2 2.6 240 chr3L 17580537 intron Eip74EF - chr3L 17580657 intron Eip74EF - chr3L 17580777 intron Eip74EF - chr3L_16_17580001 chr3L_17580001 RAL-900_125b 2270 chr3L 17592767 17592822 chr3L 17592902 17592963 23 141 0.0 14.0 7.0 2.9 196 chr3L 17592767 intron Eip74EF - chr3L 17592865 intron Eip74EF - chr3L 17592963 intron Eip74EF - chr3L_23_17590001 chr3L_17590001 RAL-900_125b 2271 chr3L 17698224 17698234 chr3L 17698856 17698866 Juan 4 632 20.5 9.5 15.0 0.2 642 chr3L 17698224 intron Ccn + chr3L 17698545 intron Ccn + chr3L 17698866 intron Ccn + chr3L_4_17695001 chr3L_17695001 RAL-900_125b 2272 chr3L 17730812 17730869 chr3L 17738192 17738249 mdg1 23 7380 11.0 10.0 10.5 2.0 7437 chr3L 17730812 intron Ccn + chr3L 17734530 intron Ccn + chr3L 17738249 intron Ccn + chr3L_23_17730001 chr3L_17730001 RAL-900_125b 2273 chr3L 17743953 17744017 chr3L 17745772 17745836 35 1818 34.5 43.0 38.8 0.9 1883 chr3L 17743953 intron Ccn + chr3L 17744894 intron Ccn + chr3L 17745836 intron,exon Ccn +,CG6034 - chr3L_35_17740001 chr3L_17740001 RAL-900_125b 2274 chr3L 17743931 17743993 chr3L 17746158 17746220 34 2228 36.5 58.5 47.5 0.7 2289 chr3L 17743931 intron Ccn + chr3L 17745076 intron Ccn + chr3L 17746220 intron,exon Ccn +,CG6034 - chr3L_34_17745001 chr3L_17745001 RAL-900_125b 2275 chr3L 17748450 17748498 chr3L 17748581 17748629 25 131 8.0 6.5 7.2 3.0 179 chr3L 17748450 3` UTR Ccn + chr3L 17748540 3` UTR Ccn + chr3L 17748629 3` UTR Ccn + chr3L_25_17745001 chr3L_17745001 RAL-900_125b 2276 chr3L 17748499 17748518 chr3L 17748570 17748649 13 126 5.0 5.5 5.2 2.1 150 chr3L 17748499 3` UTR Ccn + chr3L 17748574 3` UTR Ccn + chr3L 17748649 3` UTR Ccn + chr3L_13_17745001 chr3L_17745001 RAL-900_125b 2277 chr3L 17787650 17787689 chr3L 17787793 17787832 19 143 12.5 14.5 13.5 1.3 182 chr3L 17787650 intergenic not near genes chr3L 17787741 intergenic not near genes chr3L 17787832 intergenic not near genes chr3L_19_17785001 chr3L_17785001 RAL-900_125b 2278 chr3L 17790150 17790419 chr3L 17790313 17790611 34 167 20.0 9.5 14.8 2.2 461 chr3L 17790150 intergenic not near genes chr3L 17790380 intergenic not near genes chr3L 17790611 intergenic CG42815 - chr3L_34_17790001 chr3L_17790001 RAL-900_125b 2279 chr3L 17790425 17790598 chr3L 17790614 17790913 10 295 0.0 0.0 0.0 10.0 488 chr3L 17790425 intergenic not near genes chr3L 17790669 intergenic CG42815 - chr3L 17790913 intergenic CG42815 - chr3L_10_17790001 chr3L_17790001 RAL-900_125b 2280 chr3L 17790602 17790631 chr3L 17790917 17790946 11 315 0.0 15.0 7.5 1.3 344 chr3L 17790602 intergenic CG42815 - chr3L 17790774 intergenic CG42815 - chr3L 17790946 intergenic CG42815 - chr3L_11_17790001 chr3L_17790001 RAL-900_125b 2281 chr3L 17791894 17791908 chr3L 17792020 17792034 6 126 9.0 5.0 7.0 0.8 140 chr3L 17791894 intergenic CG42816 -,CG42815 - chr3L 17791964 intergenic CG42816 -,CG42815 - chr3L 17792034 intergenic CG42816 - chr3L_6_17790001 chr3L_17790001 RAL-900_125b 2282 chr3L 17799767 17799835 chr3L 17801604 17801672 S-element 31 1837 13.0 8.5 10.8 2.6 1905 chr3L 17799767 intron NUCB1 - chr3L 17800720 intron NUCB1 - chr3L 17801672 intron NUCB1 - chr3L_31_17800001 chr3L_17800001 RAL-900_125b 2283 chr3L 17858180 17858184 chr3L 17874482 17874486 Doc 4 16302 2.0 3.0 2.5 1.1 16306 chr3L 17858180 intergenic CG34002 + chr3L 17866333 intergenic not near genes chr3L 17874486 intergenic not near genes chr3L_4_17865001 chr3L_17865001 RAL-900_125b 2284 chr3L 17860668 17860678 chr3L 17861334 17861344 invader4 20 666 24.0 84.0 54.0 0.4 676 chr3L 17860668 intergenic CG34002 + chr3L 17861006 intergenic not near genes chr3L 17861344 intergenic not near genes chr3L_20_17860001 chr3L_17860001 RAL-900_125b 2285 chr3L 17878364 17878390 chr3L 17878581 17878607 5 217 6.0 6.5 6.2 0.7 243 chr3L 17878364 intergenic not near genes chr3L 17878486 intergenic not near genes chr3L 17878607 intergenic CG7408 + chr3L_5_17875001 chr3L_17875001 RAL-900_125b 2286 chr3L 17906530 17906608 chr3L 17906681 17906759 42 151 6.5 9.0 7.8 4.8 229 chr3L 17906530 intron Prestin - chr3L 17906644 intron Prestin - chr3L 17906759 intron Prestin - chr3L_42_17905001 chr3L_17905001 RAL-900_125b 2287 chr3L 17917599 17917633 chr3L 17917939 17917973 14 340 0.0 18.0 9.0 1.4 374 chr3L 17917599 intergenic not near genes chr3L 17917786 intergenic not near genes chr3L 17917973 intergenic not near genes chr3L_14_17915001 chr3L_17915001 RAL-900_125b 2288 chr3L 17918336 17918396 chr3L 17921188 17921249 opus 19 2852 1.5 15.5 8.5 2.0 2913 chr3L 17918336 intergenic not near genes chr3L 17919792 intergenic not near genes chr3L 17921249 intergenic not near genes chr3L_19_17915001 chr3L_17915001 RAL-900_125b 2289 chr3L 17923534 17923599 chr3L 17923661 17923726 12 127 11.0 9.0 10.0 1.1 192 chr3L 17923534 intergenic not near genes chr3L 17923630 intergenic not near genes chr3L 17923726 intergenic not near genes chr3L_12_17920001 chr3L_17920001 RAL-900_125b 2290 chr3L 17991536 17991583 chr3L 17991664 17991711 21 128 11.5 16.0 13.8 1.4 175 chr3L 17991536 intron Eip75B - chr3L 17991624 intron Eip75B - chr3L 17991711 intron Eip75B - chr3L_21_17990001 chr3L_17990001 RAL-900_125b 2291 chr3L 17999723 17999800 chr3L 17999852 17999930 26 126 0.5 5.5 3.0 6.5 207 chr3L 17999723 intron Eip75B - chr3L 17999826 intron Eip75B - chr3L 17999930 intron Eip75B - chr3L_26_17995001 chr3L_17995001 RAL-900_125b 2292 chr3L 18002675 18002743 chr3L 18002812 18002880 19 137 5.0 4.5 4.8 3.3 205 chr3L 18002675 intron Eip75B - chr3L 18002778 intron Eip75B - chr3L 18002880 intron Eip75B - chr3L_19_18000001 chr3L_18000001 RAL-900_125b 2293 chr3L 18016101 18016172 chr3L 18016269 18016340 29 167 10.5 7.5 9.0 2.9 239 chr3L 18016101 intron Eip75B - chr3L 18016220 intron Eip75B - chr3L 18016340 intron Eip75B - chr3L_29_18015001 chr3L_18015001 RAL-900_125b 2294 chr3L 18020520 18020582 chr3L 18020676 18020738 29 155 7.0 4.5 5.8 4.3 218 chr3L 18020520 intron Eip75B - chr3L 18020629 intron Eip75B - chr3L 18020738 intron Eip75B - chr3L_29_18020001 chr3L_18020001 RAL-900_125b 2295 chr3L 18021311 18021378 chr3L 18021448 18021520 35 140 8.0 9.5 8.8 3.6 209 chr3L 18021311 intron Eip75B - chr3L 18021416 intron Eip75B - chr3L 18021520 intron Eip75B - chr3L_35_18020001 chr3L_18020001 RAL-900_125b 2296 chr3L 18029910 18029938 chr3L 18030037 18030065 13 127 16.0 0.0 8.0 1.4 155 chr3L 18029910 intron Eip75B - chr3L 18029988 intron Eip75B - chr3L 18030065 intron Eip75B - chr3L_13_18025001 chr3L_18025001 RAL-900_125b 2297 chr3L 18042211 18042478 chr3L 18042321 18042606 35 127 0.0 6.0 3.0 8.8 395 chr3L 18042211 intron Eip75B - chr3L 18042408 intron Eip75B - chr3L 18042606 intron Eip75B - chr3L_35_18040001 chr3L_18040001 RAL-900_125b 2298 chr3L 18042508 18042515 chr3L 18042636 18042643 6 128 0.0 10.5 5.2 1.0 135 chr3L 18042508 intron Eip75B - chr3L 18042576 intron Eip75B - chr3L 18042643 intron Eip75B - chr3L_6_18040001 chr3L_18040001 RAL-900_125b 2299 chr3L 18047661 18047730 chr3L 18056767 18056836 roo 31 9106 6.5 11.5 9.0 3.1 9175 chr3L 18047661 intron Eip75B - chr3L 18052248 intron Eip75B - chr3L 18056836 intron Eip75B - chr3L_31_18050001 chr3L_18050001 RAL-900_125b 2300 chr3L 18057928 18058003 chr3L 18058079 18058154 24 149 10.5 5.0 7.8 2.7 226 chr3L 18057928 intron Eip75B - chr3L 18058041 intron Eip75B - chr3L 18058154 intron Eip75B - chr3L_24_18055001 chr3L_18055001 RAL-900_125b 2301 chr3L 18106208 18106285 chr3L 18106377 18106454 13 166 5.0 0.5 2.8 3.4 246 chr3L 18106208 intergenic CG13698 -,mRpS26 + chr3L 18106331 intergenic CG13698 -,mRpS26 + chr3L 18106454 intergenic mRpS26 +,CG13698 - chr3L_13_18105001 chr3L_18105001 RAL-900_125b 2302 chr3L 18113282 18113292 chr3L 18113417 18113427 5 135 10.5 19.0 14.8 0.3 145 chr3L 18113282 intron,intron CG32195 +,CG7341 + chr3L 18113354 intron,intron CG32195 +,CG7341 + chr3L 18113427 intron,intron CG32195 +,CG7341 + chr3L_5_18110001 chr3L_18110001 RAL-900_125b 2303 chr3L 18118168 18118236 chr3L 18118296 18118364 33 126 4.5 1.5 3.0 8.2 196 chr3L 18118168 3` UTR,intron CG32195 +,CG7341 + chr3L 18118266 3` UTR,intron CG32195 +,CG7341 + chr3L 18118364 3` UTR,intron CG32195 +,CG7341 + chr3L_33_18115001 chr3L_18115001 RAL-900_125b 2304 chr3L 18119592 18119669 chr3L 18119754 18119817 14 160 0.0 8.0 4.0 2.8 225 chr3L 18119592 intron CG7341 + chr3L 18119704 intron CG7341 + chr3L 18119817 exon CG7341 + chr3L_14_18115001 chr3L_18115001 RAL-900_125b 2305 chr3L 18124376 18124428 chr3L 18124510 18124562 24 134 4.5 11.0 7.8 2.7 186 chr3L 18124376 intergenic not near genes chr3L 18124469 intergenic not near genes chr3L 18124562 intergenic not near genes chr3L_24_18120001 chr3L_18120001 RAL-900_125b 2306 chr3L 18150354 18150415 chr3L 18150505 18150579 17 152 9.5 0.0 4.8 2.9 225 chr3L 18150354 intron CG7330 + chr3L 18150466 intron CG7330 + chr3L 18150579 intron CG7330 + chr3L_17_18150001 chr3L_18150001 RAL-900_125b 2307 chr3L 18164234 18164240 chr3L 18164458 18164464 7 224 0.0 7.0 3.5 1.6 230 chr3L 18164234 intergenic not near genes chr3L 18164349 intergenic not near genes chr3L 18164464 intergenic not near genes chr3L_7_18160001 chr3L_18160001 RAL-900_125b 2308 chr3L 18172642 18172704 chr3L 18172768 18172829 23 126 12.0 7.5 9.8 2.1 187 chr3L 18172642 intron W - chr3L 18172736 intron W - chr3L 18172829 intron W - chr3L_23_18170001 chr3L_18170001 RAL-900_125b 2309 chr3L 18189547 18189585 chr3L 18190190 18190228 S-element 17 642 17.0 8.0 12.5 1.3 681 chr3L 18189547 intergenic not near genes chr3L 18189888 intergenic not near genes chr3L 18190228 intergenic not near genes chr3L_17_18185001 chr3L_18185001 RAL-900_125b 2310 chr3L 18198929 18198933 chr3L 24821492 24821493 21 6622563 2.5 28.5 15.5 1.3 6622564 chr3L 18198929 intergenic not near genes chr3L 21510211 intron M6 + chr3L 24821493 intergenic not near genes chr3L_21_21510001 chr3L_21510001 RAL-900_125b 2311 chr3L 18203555 18203607 chr3L 18203700 18203740 10 137 12.0 0.0 6.0 1.4 185 chr3L 18203555 exon CG7320 + chr3L 18203648 intergenic CG7320 + chr3L 18203740 intergenic CG7320 + chr3L_10_18200001 chr3L_18200001 RAL-900_125b 2312 chr3L 18223114 18223189 chr3L 18223247 18223334 29 141 7.0 0.0 3.5 6.4 220 chr3L 18223114 intergenic not near genes chr3L 18223224 intergenic not near genes chr3L 18223334 intergenic not near genes chr3L_29_18220001 chr3L_18220001 RAL-900_125b 2313 chr3L 18226617 18226634 chr3L 18226758 18226775 9 141 10.5 9.0 9.8 0.8 158 chr3L 18226617 intergenic not near genes chr3L 18226696 intergenic not near genes chr3L 18226775 intergenic not near genes chr3L_9_18225001 chr3L_18225001 RAL-900_125b 2314 chr3L 18248906 18248978 chr3L 18249054 18249126 12 148 11.0 6.0 8.5 1.3 220 chr3L 18248906 intergenic not near genes chr3L 18249016 intergenic not near genes chr3L 18249126 intergenic not near genes chr3L_12_18245001 chr3L_18245001 RAL-900_125b 2315 chr3L 18283885 18283956 chr3L 18284012 18284083 33 127 6.5 9.5 8.0 3.7 198 chr3L 18283885 intergenic not near genes chr3L 18283984 intergenic not near genes chr3L 18284083 intergenic not near genes chr3L_33_18280001 chr3L_18280001 RAL-900_125b 2316 chr3L 18319209 18319288 chr3L 18319336 18319415 18 124 3.5 4.0 3.8 3.8 206 chr3L 18319209 intergenic not near genes chr3L 18319312 intergenic not near genes chr3L 18319415 intergenic not near genes chr3L_18_18315001 chr3L_18315001 RAL-900_125b 2317 chr3L 18386857 18386878 chr3L 18386987 18387008 6 130 0.0 7.5 3.8 1.2 151 chr3L 18386857 intergenic not near genes chr3L 18386932 intergenic not near genes chr3L 18387008 intergenic not near genes chr3L_6_18385001 chr3L_18385001 RAL-900_125b 2318 chr3L 18406083 18406147 chr3L 18406209 18406273 20 126 3.5 10.0 6.8 2.6 190 chr3L 18406083 intergenic not near genes chr3L 18406178 intergenic not near genes chr3L 18406273 intergenic not near genes chr3L_20_18405001 chr3L_18405001 RAL-900_125b 2319 chr3L 18408693 18408749 chr3L 18408829 18408885 20 136 6.5 10.0 8.2 2.2 192 chr3L 18408693 intergenic not near genes chr3L 18408789 intergenic not near genes chr3L 18408885 intergenic not near genes chr3L_20_18405001 chr3L_18405001 RAL-900_125b 2320 chr3L 9013689 9013693 chr3L 18417066 18417066 5 9403374 32.0 31.0 31.5 0.2 9403377 chr3L 9013689 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_5_13715001 chr3L_13715001 RAL-900_125b 2321 chr3L 18436023 18436086 chr3L 18436171 18436234 25 148 8.0 7.5 7.8 2.8 211 chr3L 18436023 intergenic not near genes chr3L 18436128 intergenic not near genes chr3L 18436234 intergenic not near genes chr3L_25_18435001 chr3L_18435001 RAL-900_125b 2322 chr3L 18445208 18445278 chr3L 18445336 18445381 27 119 4.5 4.5 4.5 4.9 173 chr3L 18445208 intergenic not near genes chr3L 18445294 intergenic not near genes chr3L 18445381 intergenic not near genes chr3L_27_18445001 chr3L_18445001 RAL-900_125b 2323 chr3L 18448570 18448618 chr3L 18448712 18448760 21 142 10.0 6.0 8.0 2.3 190 chr3L 18448570 intergenic not near genes chr3L 18448665 intergenic not near genes chr3L 18448760 intergenic not near genes chr3L_21_18445001 chr3L_18445001 RAL-900_125b 2324 chr3L 18456227 18456299 chr3L 18456365 18456437 30 138 13.0 11.5 12.2 2.3 210 chr3L 18456227 intergenic CR44670 - chr3L 18456332 intergenic CR44670 - chr3L 18456437 3` UTR CR44670 - chr3L_30_18455001 chr3L_18455001 RAL-900_125b 2325 chr3L 18506093 18506160 chr3L 18509605 18509671 F-element 30 3511 8.5 7.5 8.0 3.3 3578 chr3L 18506093 intergenic not near genes chr3L 18507882 intergenic not near genes chr3L 18509671 intergenic not near genes chr3L_30_18505001 chr3L_18505001 RAL-900_125b 2326 chr3L 18514871 18514917 chr3L 18520112 18520158 BS 24 5241 9.5 14.0 11.8 1.9 5287 chr3L 18514871 intergenic not near genes chr3L 18517514 intergenic not near genes chr3L 18520158 intergenic not near genes chr3L_24_18515001 chr3L_18515001 RAL-900_125b 2327 chr3L 18528585 18528650 chr3L 18537796 18537861 roo 30 9211 9.0 10.5 9.8 2.8 9276 chr3L 18528585 intergenic not near genes chr3L 18533223 intergenic not near genes chr3L 18537861 intergenic not near genes chr3L_30_18530001 chr3L_18530001 RAL-900_125b 2328 chr3L 18582173 18582239 chr3L 18582308 18582374 26 134 7.5 8.5 8.0 2.9 201 chr3L 18582173 intergenic not near genes chr3L 18582274 intergenic not near genes chr3L 18582374 intergenic not near genes chr3L_26_18580001 chr3L_18580001 RAL-900_125b 2329 chr3L 18593904 18593981 chr3L 18595934 18596014 Doc 18 2029 7.0 4.5 5.8 2.6 2110 chr3L 18593904 intergenic term - chr3L 18594959 intergenic not near genes chr3L 18596014 intergenic CR45389 + chr3L_18_18590001 chr3L_18590001 RAL-900_125b 2330 chr3L 18607829 18607860 chr3L 18607974 18608005 16 144 10.5 6.5 8.5 1.7 176 chr3L 18607829 intron,intron,exon CG13380 -,CG4174 -,CG18231 + chr3L 18607917 intron,intron,intron CG13380 -,CG4174 -,CG18231 + chr3L 18608005 intron,intron,exon CG13380 -,CG4174 -,CG18231 + chr3L_16_18605001 chr3L_18605001 RAL-900_125b 2331 chr3L 18631241 18631304 chr3L 18631370 18631433 32 124 6.5 5.5 6.0 4.6 192 chr3L 18631241 intron MYPT-75D + chr3L 18631337 intron MYPT-75D + chr3L 18631433 intron MYPT-75D + chr3L_32_18630001 chr3L_18630001 RAL-900_125b 2332 chr3L 18651071 18651117 chr3L 18651177 18651227 16 104 10.0 12.5 11.2 1.3 156 chr3L 18651071 intron MYPT-75D + chr3L 18651149 intron MYPT-75D + chr3L 18651227 intron MYPT-75D + chr3L_16_18650001 chr3L_18650001 RAL-900_125b 2333 chr3L 18653513 18653571 chr3L 18654368 18654433 6 861 0.0 9.5 4.8 1.0 920 chr3L 18653513 intron MYPT-75D + chr3L 18653973 intron MYPT-75D + chr3L 18654433 intron MYPT-75D + chr3L_6_18650001 chr3L_18650001 RAL-900_125b 2334 chr3L 18658267 18658300 chr3L 18658400 18658433 14 133 7.0 6.5 6.8 1.8 166 chr3L 18658267 intron MYPT-75D + chr3L 18658350 intron MYPT-75D + chr3L 18658433 intron MYPT-75D + chr3L_14_18655001 chr3L_18655001 RAL-900_125b 2335 chr3L 18710742 18710782 chr3L 18718742 18718782 Stalker2 19 8000 13.0 4.0 8.5 2.0 8040 chr3L 18710742 intergenic not near genes chr3L 18714762 intergenic not near genes chr3L 18718782 intergenic not near genes chr3L_19_18710001 chr3L_18710001 RAL-900_125b 2336 chr3L 18720268 18720339 chr3L 18720396 18720467 30 125 8.0 8.0 8.0 3.3 199 chr3L 18720268 intergenic not near genes chr3L 18720368 intergenic not near genes chr3L 18720467 intergenic not near genes chr3L_30_18720001 chr3L_18720001 RAL-900_125b 2337 chr3L 18721724 18721787 chr3L 18721865 18721928 19 141 7.5 11.0 9.2 1.9 204 chr3L 18721724 intergenic CG12477 - chr3L 18721826 intergenic CG12477 - chr3L 18721928 3` UTR CG12477 - chr3L_19_18720001 chr3L_18720001 RAL-900_125b 2338 chr3L 18738614 18738693 chr3L 18738752 18738831 29 137 2.0 7.0 4.5 5.3 217 chr3L 18738614 intergenic not near genes chr3L 18738722 intergenic not near genes chr3L 18738831 intergenic not near genes chr3L_29_18735001 chr3L_18735001 RAL-900_125b 2339 chr3L 18741951 18741972 chr3L 18742087 18742108 11 136 14.5 4.5 9.5 1.0 157 chr3L 18741951 intergenic not near genes chr3L 18742030 intergenic not near genes chr3L 18742108 intergenic not near genes chr3L_11_18740001 chr3L_18740001 RAL-900_125b 2340 chr3L 18743504 18743508 chr3L 18743661 18743665 4 157 0.0 16.0 8.0 0.4 161 chr3L 18743504 intergenic not near genes chr3L 18743584 intergenic not near genes chr3L 18743665 intergenic not near genes chr3L_4_18740001 chr3L_18740001 RAL-900_125b 2341 chr3L 15416952 15416953 chr3L 18743738 18743739 5 3326786 33.5 36.0 34.8 0.1 3326787 chr3L 15416952 intergenic not near genes chr3L 17080346 intron Rbp6 - chr3L 18743739 intergenic not near genes chr3L_5_17080001 chr3L_17080001 RAL-900_125b 2342 chr3L 18772365 18772432 chr3L 18781096 18781163 roo 37 8731 10.5 8.0 9.2 3.6 8798 chr3L 18772365 intron ftz-f1 - chr3L 18776764 intron ftz-f1 - chr3L 18781163 intron ftz-f1 - chr3L_37_18775001 chr3L_18775001 RAL-900_125b 2343 chr3L 18784349 18784402 chr3L 18784488 18784541 18 139 7.0 8.5 7.8 2.0 192 chr3L 18784349 intron ftz-f1 - chr3L 18784445 intron ftz-f1 - chr3L 18784541 intron ftz-f1 - chr3L_18_18780001 chr3L_18780001 RAL-900_125b 2344 chr3L 18788379 18788450 chr3L 18788539 18788610 26 159 7.5 12.0 9.8 2.4 231 chr3L 18788379 intron ftz-f1 - chr3L 18788494 intron ftz-f1 - chr3L 18788610 intron ftz-f1 - chr3L_26_18785001 chr3L_18785001 RAL-900_125b 2345 chr3L 18797278 18797336 chr3L 18797412 18797470 27 134 8.5 9.0 8.8 2.8 192 chr3L 18797278 intron ftz-f1 - chr3L 18797374 intron ftz-f1 - chr3L 18797470 intron ftz-f1 - chr3L_27_18795001 chr3L_18795001 RAL-900_125b 2346 chr3L 18843824 18843882 chr3L 18843972 18844030 20 148 10.0 10.0 10.0 1.8 206 chr3L 18843824 intron Indy - chr3L 18843927 intron Indy - chr3L 18844030 intron Indy - chr3L_20_18840001 chr3L_18840001 RAL-900_125b 2347 chr3L 18924438 18924507 chr3L 18924564 18924633 24 126 3.5 5.0 4.2 4.6 195 chr3L 18924438 intron CG32204 - chr3L 18924536 intron CG32204 - chr3L 18924633 intron CG32204 - chr3L_24_18920001 chr3L_18920001 RAL-900_125b 2348 chr3L 18928885 18928889 chr3L 18929015 18929019 6 130 7.5 15.5 11.5 0.5 134 chr3L 18928885 intron CG32204 - chr3L 18928952 intron CG32204 - chr3L 18929019 intron CG32204 - chr3L_6_18925001 chr3L_18925001 RAL-900_125b 2349 chr3L 18929919 18929987 chr3L 18930054 18930121 22 134 7.5 10.0 8.8 2.2 202 chr3L 18929919 intron CG32204 - chr3L 18930020 intron CG32204 - chr3L 18930121 exon CG32204 - chr3L_22_18930001 chr3L_18930001 RAL-900_125b 2350 chr3L 18933048 18933117 chr3L 18933183 18933252 34 135 5.5 5.5 5.5 5.2 204 chr3L 18933048 5` UTR CG32204 - chr3L 18933150 intron CG32204 - chr3L 18933252 intron CG32204 - chr3L_34_18930001 chr3L_18930001 RAL-900_125b 2351 chr3L 18941220 18941296 chr3L 18941610 18941685 22 388 8.0 15.0 11.5 1.8 465 chr3L 18941220 intron CG32204 - chr3L 18941452 intron CG32204 - chr3L 18941685 intron CG32204 - chr3L_22_18940001 chr3L_18940001 RAL-900_125b 2352 chr3L 18950985 18951042 chr3L 18951101 18951169 31 126 11.0 10.0 10.5 2.7 184 chr3L 18950985 intron CG6836 + chr3L 18951077 intron CG6836 + chr3L 18951169 intron CG6836 + chr3L_31_18950001 chr3L_18950001 RAL-900_125b 2353 chr3L 18959957 18959999 chr3L 18960088 18960130 33 131 10.5 9.5 10.0 3.0 173 chr3L 18959957 intergenic not near genes chr3L 18960044 intergenic not near genes chr3L 18960130 intergenic not near genes chr3L_33_18960001 chr3L_18960001 RAL-900_125b 2354 chr3L 18962558 18962627 chr3L 18962688 18962757 10 130 8.5 13.0 10.8 0.8 199 chr3L 18962558 intergenic not near genes chr3L 18962658 intergenic not near genes chr3L 18962757 intergenic not near genes chr3L_10_18960001 chr3L_18960001 RAL-900_125b 2355 chr3L 18969499 18969575 chr3L 18969625 18969700 41 125 11.0 11.5 11.2 3.4 201 chr3L 18969499 intergenic not near genes chr3L 18969600 intergenic not near genes chr3L 18969700 intergenic not near genes chr3L_41_18965001 chr3L_18965001 RAL-900_125b 2356 chr3L 19008805 19008867 chr3L 19009193 19009255 jockey 31 387 12.0 10.5 11.2 2.5 450 chr3L 19008805 intron nkd - chr3L 19009030 intron nkd - chr3L 19009255 intron nkd - chr3L_31_19005001 chr3L_19005001 RAL-900_125b 2357 chr3L 19015157 19015217 chr3L 19015291 19015347 16 133 1.5 14.0 7.8 1.8 190 chr3L 19015157 intron nkd - chr3L 19015252 intron nkd - chr3L 19015347 intron nkd - chr3L_16_19015001 chr3L_19015001 RAL-900_125b 2358 chr3L 19104427 19104445 chr3L 19107718 19107736 7 3291 32.0 27.0 29.5 0.2 3309 chr3L 19104427 intergenic not near genes chr3L 19106082 3` UTR CG14082 - chr3L 19107736 exon CG14082 - chr3L_7_19105001 chr3L_19105001 RAL-900_125b 2359 chr3L 19111326 19111355 chr3L 19111463 19111487 9 136 21.5 22.0 21.8 0.4 161 chr3L 19111326 intron CG14082 - chr3L 19111406 intron CG14082 - chr3L 19111487 intron CG14082 - chr3L_9_19110001 chr3L_19110001 RAL-900_125b 2360 chr3L 19115599 19115629 chr3L 19115827 19115859 BS 17 227 21.5 10.5 16.0 1.0 260 chr3L 19115599 intron CG14082 - chr3L 19115729 intron CG14082 - chr3L 19115859 intron CG14082 - chr3L_17_19115001 chr3L_19115001 RAL-900_125b 2361 chr3L 19115633 19115660 chr3L 19115821 19115886 BS 20 223 14.5 10.5 12.5 1.5 253 chr3L 19115633 intron CG14082 - chr3L 19115760 intron CG14082 - chr3L 19115886 intron CG14082 - chr3L_20_19115001 chr3L_19115001 RAL-900_125b 2362 chr3L 19117009 19117070 chr3L 19124491 19124567 mdg1 36 7495 9.0 10.0 9.5 3.4 7558 chr3L 19117009 intron CG14082 - chr3L 19120788 intron CG14082 - chr3L 19124567 intron CG14082 - chr3L_36_19120001 chr3L_19120001 RAL-900_125b 2363 chr3L 19135053 19135119 chr3L 19135255 19135319 13 199 37.0 40.0 38.5 0.3 266 chr3L 19135053 intron CG14082 - chr3L 19135186 intron CG14082 - chr3L 19135319 intron CG14082 - chr3L_13_19135001 chr3L_19135001 RAL-900_125b 2364 chr3L 19136280 19136347 chr3L 19136415 19136480 14 132 13.0 12.5 12.8 1.0 200 chr3L 19136280 intron CG14082 - chr3L 19136380 intron CG14082 - chr3L 19136480 5` UTR CG14082 - chr3L_14_19135001 chr3L_19135001 RAL-900_125b 2365 chr3L 19138105 19138157 chr3L 19138237 19138301 14 140 0.0 9.0 4.5 2.5 196 chr3L 19138105 intron CG14082 - chr3L 19138203 intron CG14082 - chr3L 19138301 intron CG14082 - chr3L_14_19135001 chr3L_19135001 RAL-900_125b 2366 chr3L 19182349 19182406 chr3L 19182475 19182537 19 130 15.5 15.5 15.5 1.2 188 chr3L 19182349 intron fz2 - chr3L 19182443 intron fz2 - chr3L 19182537 intron fz2 - chr3L_19_19180001 chr3L_19180001 RAL-900_125b 2367 chr3L 19189498 19189569 chr3L 19190225 19190288 22 723 11.5 19.5 15.5 1.3 790 chr3L 19189498 intron fz2 - chr3L 19189893 intron fz2 - chr3L 19190288 intron fz2 - chr3L_22_19185001 chr3L_19185001 RAL-900_125b 2368 chr3L 19191474 19191536 chr3L 19191607 19191669 17 132 16.5 26.5 21.5 0.8 195 chr3L 19191474 intron fz2 - chr3L 19191572 intron fz2 - chr3L 19191669 intron fz2 - chr3L_17_19190001 chr3L_19190001 RAL-900_125b 2369 chr3L 19208012 19208090 chr3L 19209436 19209488 Doc 22 1420 5.0 4.5 4.8 3.8 1476 chr3L 19208012 intron fz2 - chr3L 19208750 intron fz2 - chr3L 19209488 intron fz2 - chr3L_22_19205001 chr3L_19205001 RAL-900_125b 2370 chr3L 19210065 19210140 chr3L 19210211 19210287 14 147 15.0 14.0 14.5 0.9 222 chr3L 19210065 intron fz2 - chr3L 19210176 intron fz2 - chr3L 19210287 intron fz2 - chr3L_14_19210001 chr3L_19210001 RAL-900_125b 2371 chr3L 19216467 19216541 chr3L 19216594 19216668 14 127 17.5 20.0 18.8 0.7 201 chr3L 19216467 intron fz2 - chr3L 19216568 intron fz2 - chr3L 19216668 intron fz2 - chr3L_14_19215001 chr3L_19215001 RAL-900_125b 2372 chr3L 19220632 19220636 chr3L 22908066 22908067 44 3687432 40.0 43.5 41.8 1.0 3687435 chr3L 19220632 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_44_21060001 chr3L_21060001 RAL-900_125b 2373 chr3L 19220637 19220637 chr3L 22908066 22908066 5 3687429 39.0 43.5 41.2 0.1 3687429 chr3L 19220637 intron fz2 - chr3L 21064352 intron siz + chr3L 22908066 intergenic not near genes chr3L_5_21060001 chr3L_21060001 RAL-900_125b 2374 chr3L 19221688 19221728 chr3L 19221839 19221889 7 160 17.0 22.5 19.8 0.3 201 chr3L 19221688 intron fz2 - chr3L 19221788 intron fz2 - chr3L 19221889 intron fz2 - chr3L_7_19220001 chr3L_19220001 RAL-900_125b 2375 chr3L 19222323 19222390 chr3L 19222494 19222560 12 171 24.5 25.5 25.0 0.5 237 chr3L 19222323 intron fz2 - chr3L 19222442 intron fz2 - chr3L 19222560 intron fz2 - chr3L_12_19220001 chr3L_19220001 RAL-900_125b 2376 chr3L 19238672 19238741 chr3L 19238830 19238898 22 157 24.5 24.5 24.5 0.9 226 chr3L 19238672 intergenic not near genes chr3L 19238785 intergenic not near genes chr3L 19238898 intergenic not near genes chr3L_22_19235001 chr3L_19235001 RAL-900_125b 2377 chr3L 19251012 19251073 chr3L 19251161 19251222 16 147 18.0 16.0 17.0 0.9 210 chr3L 19251012 intergenic not near genes chr3L 19251117 intergenic not near genes chr3L 19251222 intergenic not near genes chr3L_16_19250001 chr3L_19250001 RAL-900_125b 2378 chr3L 19262165 19262235 chr3L 19262297 19262367 32 132 8.5 12.5 10.5 2.8 202 chr3L 19262165 3` UTR Bet1 + chr3L 19262266 3` UTR,3` UTR Bet1 +,Max - chr3L 19262367 3` UTR,3` UTR Bet1 +,Max - chr3L_32_19260001 chr3L_19260001 RAL-900_125b 2379 chr3L 19263191 19263260 chr3L 19263402 19263471 16 210 21.5 17.0 19.2 0.8 280 chr3L 19263191 exon Max - chr3L 19263331 intron Max - chr3L 19263471 exon Max - chr3L_16_19260001 chr3L_19260001 RAL-900_125b 2380 chr3L 19269776 19269840 chr3L 19270027 19270094 15 249 26.0 26.0 26.0 0.6 318 chr3L 19269776 intron,exon CG14085 +,CG14088 - chr3L 19269935 intron,exon CG14085 +,CG14088 - chr3L 19270094 intron,exon CG14085 +,CG14088 - chr3L_15_19265001 chr3L_19265001 RAL-900_125b 2381 chr3L 19291036 19291101 chr3L 19299472 19299537 12 8436 45.5 43.5 44.5 0.3 8501 chr3L 19291036 intron Gbs-76A - chr3L 19295286 intron fal + chr3L 19299537 3` UTR pip - chr3L_12_19295001 chr3L_19295001 RAL-900_125b 2382 chr3L 19325367 19325390 chr3L 19325494 19325517 7 125 31.5 28.5 30.0 0.2 150 chr3L 19325367 intron pip - chr3L 19325442 intron pip - chr3L 19325517 intron pip - chr3L_7_19325001 chr3L_19325001 RAL-900_125b 2383 chr3L 19325394 19325422 chr3L 19325475 19325549 12 116 23.0 30.5 26.8 0.4 155 chr3L 19325394 intron pip - chr3L 19325472 intron pip - chr3L 19325549 intron pip - chr3L_12_19325001 chr3L_19325001 RAL-900_125b 2384 chr3L 19335697 19335766 chr3L 19335834 19335903 38 137 13.5 16.5 15.0 2.4 206 chr3L 19335697 intron pip - chr3L 19335800 intron pip - chr3L 19335903 intron pip - chr3L_38_19335001 chr3L_19335001 RAL-900_125b 2385 chr3L 19338323 19338392 chr3L 19338468 19338534 16 145 12.0 20.0 16.0 0.9 211 chr3L 19338323 intergenic not near genes chr3L 19338428 intergenic not near genes chr3L 19338534 intergenic not near genes chr3L_16_19335001 chr3L_19335001 RAL-900_125b 2386 chr3L 19342712 19342775 chr3L 19342853 19342916 29 141 10.0 8.5 9.2 2.8 204 chr3L 19342712 3` UTR CG32206 - chr3L 19342814 3` UTR CG32206 - chr3L 19342916 3` UTR CG32206 - chr3L_29_19340001 chr3L_19340001 RAL-900_125b 2387 chr3L 19346818 19346876 chr3L 19346953 19346999 10 131 0.5 18.0 9.2 1.0 181 chr3L 19346818 intron CG32206 - chr3L 19346908 intron CG32206 - chr3L 19346999 intron CG32206 - chr3L_10_19345001 chr3L_19345001 RAL-900_125b 2388 chr3L 19365918 19365925 chr3L 19366065 19366072 5 147 0.0 23.5 11.8 0.4 154 chr3L 19365918 intron CG32206 - chr3L 19365995 intron CG32206 - chr3L 19366072 intron CG32206 - chr3L_5_19365001 chr3L_19365001 RAL-900_125b 2389 chr3L 19369536 19369600 chr3L 19369732 19369796 12 196 17.0 23.5 20.2 0.6 260 chr3L 19369536 intron CG32206 - chr3L 19369666 intron CG32206 - chr3L 19369796 intron CG32206 - chr3L_12_19365001 chr3L_19365001 RAL-900_125b 2390 chr3L 19398897 19398925 chr3L 19403664 19403692 F-element 10 4764 6.5 8.0 7.2 1.2 4795 chr3L 19398897 intron CG32206 - chr3L 19401294 intron CG32206 - chr3L 19403692 intron CG32206 - chr3L_10_19400001 chr3L_19400001 RAL-900_125b 2391 chr3L 19417764 19417822 chr3L 19417894 19417952 16 128 15.5 15.5 15.5 1.0 188 chr3L 19417764 intergenic not near genes chr3L 19417858 intergenic not near genes chr3L 19417952 intergenic not near genes chr3L_16_19415001 chr3L_19415001 RAL-900_125b 2392 chr3L 19426732 19426770 chr3L 19426835 19426898 10 120 18.5 21.5 20.0 0.5 166 chr3L 19426732 intergenic not near genes chr3L 19426815 intergenic not near genes chr3L 19426898 intergenic not near genes chr3L_10_19425001 chr3L_19425001 RAL-900_125b 2393 chr3L 19430355 19430426 chr3L 19430483 19430554 24 127 7.5 6.5 7.0 3.0 199 chr3L 19430355 intergenic not near genes chr3L 19430454 intergenic not near genes chr3L 19430554 intergenic not near genes chr3L_24_19430001 chr3L_19430001 RAL-900_125b 2394 chr3L 19439207 19439288 chr3L 19439355 19439424 24 144 8.0 8.0 8.0 2.7 217 chr3L 19439207 intergenic not near genes chr3L 19439316 intergenic not near genes chr3L 19439424 intergenic not near genes chr3L_24_19435001 chr3L_19435001 RAL-900_125b 2395 chr3L 19453163 19453228 chr3L 19453322 19453382 17 154 17.5 18.5 18.0 0.9 219 chr3L 19453163 intergenic not near genes chr3L 19453272 intergenic not near genes chr3L 19453382 intergenic not near genes chr3L_17_19450001 chr3L_19450001 RAL-900_125b 2396 chr3L 19488476 19488501 chr3L 19488608 19488633 11 132 10.0 22.0 16.0 0.6 157 chr3L 19488476 intergenic pncr009:3L -,CG32212 + chr3L 19488554 intergenic pncr009:3L -,CG32212 + chr3L 19488633 intergenic pncr009:3L -,CG32212 + chr3L_11_19485001 chr3L_19485001 RAL-900_125b 2397 chr3L 19513386 19513413 chr3L 19513512 19513521 4 123 19.5 26.0 22.8 0.2 135 chr3L 19513386 intergenic not near genes chr3L 19513454 intergenic not near genes chr3L 19513521 intergenic not near genes chr3L_4_19510001 chr3L_19510001 RAL-900_125b 2398 chr3L 19527890 19527899 chr3L 19528019 19528028 4 129 33.0 34.0 33.5 0.1 138 chr3L 19527890 intergenic not near genes chr3L 19527959 intergenic not near genes chr3L 19528028 intergenic not near genes chr3L_4_19525001 chr3L_19525001 RAL-900_125b 2399 chr3L 19527906 19527948 chr3L 19528009 19528057 8 123 29.0 31.5 30.2 0.3 151 chr3L 19527906 intergenic not near genes chr3L 19527982 intergenic not near genes chr3L 19528057 intergenic not near genes chr3L_8_19525001 chr3L_19525001 RAL-900_125b 2400 chr3L 19554791 19554849 chr3L 19554935 19554993 10 144 21.0 25.5 23.2 0.4 202 chr3L 19554791 intergenic CG9300 + chr3L 19554892 intergenic CG9300 + chr3L 19554993 intergenic CG9300 + chr3L_10_19550001 chr3L_19550001 RAL-900_125b 2401 chr3L 19669465 19669522 chr3L 19669604 19669615 5 125 6.0 10.5 8.2 0.5 150 chr3L 19669465 intergenic not near genes chr3L 19669540 intergenic not near genes chr3L 19669615 intergenic not near genes chr3L_5_19665001 chr3L_19665001 RAL-900_125b 2402 chr3L 19695432 19695446 chr3L 19695521 19695574 4 117 13.5 22.5 18.0 0.2 142 chr3L 19695432 intergenic verm - chr3L 19695503 intergenic verm - chr3L 19695574 intergenic verm - chr3L_4_19695001 chr3L_19695001 RAL-900_125b 2403 chr3L 19792327 19792359 chr3L 19792472 19792504 15 145 21.5 19.5 20.5 0.7 177 chr3L 19792327 intron,intron CG42637 -,Gyc76C - chr3L 19792416 intron,intron CG42637 -,Gyc76C - chr3L 19792504 intron,intron CG42637 -,Gyc76C - chr3L_15_19790001 chr3L_19790001 RAL-900_125b 2404 chr3L 19820248 19820316 chr3L 19827847 19827915 412 39 7599 6.0 8.0 7.0 4.9 7667 chr3L 19820248 intron Deaf1 + chr3L 19824082 intron Deaf1 + chr3L 19827915 intron Deaf1 + chr3L_39_19820001 chr3L_19820001 RAL-900_125b 2405 chr3L 19848471 19848531 chr3L 19857711 19857772 roo 31 9237 14.5 13.0 13.8 2.1 9301 chr3L 19848471 intron Papss + chr3L 19853122 intron Papss + chr3L 19857772 intron Papss + chr3L_31_19850001 chr3L_19850001 RAL-900_125b 2406 chr3L 19861784 19861840 chr3L 19863622 19863678 S-element 9 1838 25.5 22.5 24.0 0.4 1894 chr3L 19861784 5` UTR CR45433 + chr3L 19862731 intergenic not near genes chr3L 19863678 intergenic not near genes chr3L_9_19860001 chr3L_19860001 RAL-900_125b 2407 chr3L 19933486 19933560 chr3L 19934358 19934432 30 871 9.0 4.5 6.8 3.8 946 chr3L 19933486 intergenic CR45678 + chr3L 19933959 5` UTR CR45678 + chr3L 19934432 intergenic CR45678 + chr3L_30_19930001 chr3L_19930001 RAL-900_125b 2408 chr3L 19981163 19981234 chr3L 19981293 19981364 23 130 10.0 11.5 10.8 1.9 201 chr3L 19981163 intergenic not near genes chr3L 19981264 intergenic CG17732 + chr3L 19981364 intergenic CG17732 + chr3L_23_19980001 chr3L_19980001 RAL-900_125b 2409 chr3L 20038773 20038833 chr3L 20039001 20039061 21 226 28.0 21.0 24.5 0.8 288 chr3L 20038773 intergenic not near genes chr3L 20038917 intergenic not near genes chr3L 20039061 intergenic not near genes chr3L_21_20035001 chr3L_20035001 RAL-900_125b 2410 chr3L 20081706 20081768 chr3L 20081839 20081901 19 133 20.5 21.5 21.0 0.9 195 chr3L 20081706 intron sNPF-R - chr3L 20081804 intron sNPF-R - chr3L 20081901 intron sNPF-R - chr3L_19_20080001 chr3L_20080001 RAL-900_125b 2411 chr3L 20083411 20083423 chr3L 20083540 20083542 6 128 15.5 16.5 16.0 0.4 131 chr3L 20083411 intron sNPF-R - chr3L 20083476 intron sNPF-R - chr3L 20083542 intron sNPF-R - chr3L_6_20080001 chr3L_20080001 RAL-900_125b 2412 chr3L 20096045 20096275 chr3L 20096199 20096433 23 156 11.5 20.0 15.8 1.4 388 chr3L 20096045 intergenic not near genes chr3L 20096239 intergenic not near genes chr3L 20096433 intergenic not near genes chr3L_23_20095001 chr3L_20095001 RAL-900_125b 2413 chr3L 20113435 20113498 chr3L 20113580 20113643 20 145 30.0 25.5 27.8 0.7 208 chr3L 20113435 intergenic not near genes chr3L 20113539 intergenic not near genes chr3L 20113643 intergenic not near genes chr3L_20_20110001 chr3L_20110001 RAL-900_125b 2414 chr3L 20113614 20113679 chr3L 20122921 20122986 roo 29 9307 11.0 10.0 10.5 2.5 9372 chr3L 20113614 intergenic not near genes chr3L 20118300 intergenic not near genes chr3L 20122986 intergenic not near genes chr3L_29_20115001 chr3L_20115001 RAL-900_125b 2415 chr3L 20143040 20143048 chr3L 20143170 20143178 5 130 7.5 15.0 11.2 0.4 138 chr3L 20143040 intergenic not near genes chr3L 20143109 intergenic not near genes chr3L 20143178 intergenic not near genes chr3L_5_20140001 chr3L_20140001 RAL-900_125b 2416 chr3L 20143049 20143104 chr3L 20143164 20143234 28 129 8.5 13.5 11.0 2.3 185 chr3L 20143049 intergenic not near genes chr3L 20143142 intergenic not near genes chr3L 20143234 intergenic not near genes chr3L_28_20140001 chr3L_20140001 RAL-900_125b 2417 chr3L 20148237 20148310 chr3L 20148377 20148450 22 139 9.5 7.0 8.2 2.4 213 chr3L 20148237 intergenic not near genes chr3L 20148344 intergenic not near genes chr3L 20148450 intergenic not near genes chr3L_22_20145001 chr3L_20145001 RAL-900_125b 2418 chr3L 20212563 20212574 chr3L 20218190 20218201 mdg3 6 5627 21.5 0.0 10.8 0.5 5638 chr3L 20212563 intergenic CG7017 - chr3L 20215382 intergenic not near genes chr3L 20218201 intergenic CG6933 - chr3L_6_20215001 chr3L_20215001 RAL-900_125b 2419 chr3L 20212575 20212585 chr3L 20218185 20218212 mdg3 10 5624 18.5 0.0 9.2 1.0 5637 chr3L 20212575 intergenic CG7017 - chr3L 20215394 intergenic not near genes chr3L 20218212 intergenic CG6933 - chr3L_10_20215001 chr3L_20215001 RAL-900_125b 2420 chr3L 20218182 20218219 chr3L 20218348 20218385 18 166 0.0 19.5 9.8 1.7 203 chr3L 20218182 intergenic CG6933 - chr3L 20218284 intergenic CG6933 - chr3L 20218385 intergenic CG6933 - chr3L_18_20215001 chr3L_20215001 RAL-900_125b 2421 chr3L 20231103 20231159 chr3L 20231284 20231340 13 181 27.5 27.5 27.5 0.5 237 chr3L 20231103 intergenic not near genes chr3L 20231222 intergenic CG13813 + chr3L 20231340 intergenic CG13813 + chr3L_13_20230001 chr3L_20230001 RAL-900_125b 2422 chr3L 20254993 20255035 chr3L 20255122 20255159 10 127 23.0 23.0 23.0 0.4 166 chr3L 20254993 intron rdgC + chr3L 20255076 intron rdgC + chr3L 20255159 intron rdgC + chr3L_10_20255001 chr3L_20255001 RAL-900_125b 2423 chr3L 20256612 20256658 chr3L 20256753 20256818 13 156 18.5 22.5 20.5 0.6 206 chr3L 20256612 exon rdgC + chr3L 20256715 intron rdgC + chr3L 20256818 intron rdgC + chr3L_13_20255001 chr3L_20255001 RAL-900_125b 2424 chr3L 20257287 20257354 chr3L 20258457 20258524 pogo 38 1168 9.0 9.0 9.0 3.8 1237 chr3L 20257287 intron rdgC + chr3L 20257906 intron rdgC + chr3L 20258524 intron rdgC + chr3L_38_20255001 chr3L_20255001 RAL-900_125b 2425 chr3L 20262775 20262828 chr3L 20262907 20262969 17 159 17.5 19.0 18.2 0.9 194 chr3L 20262775 exon rdgC + chr3L 20262872 intron rdgC + chr3L 20262969 intron rdgC + chr3L_17_20260001 chr3L_20260001 RAL-900_125b 2426 chr3L 20264277 20264329 chr3L 20264413 20264465 10 136 26.5 28.5 27.5 0.4 188 chr3L 20264277 3` UTR rdgC + chr3L 20264371 3` UTR rdgC + chr3L 20264465 3` UTR rdgC + chr3L_10_20260001 chr3L_20260001 RAL-900_125b 2427 chr3L 20344238 20344251 chr3L 20344378 20344391 INE-1 5 140 31.0 29.5 30.2 0.2 153 chr3L 20344238 3` UTR Spn77Bc + chr3L 20344314 3` UTR Spn77Bc + chr3L 20344391 intergenic Spn77Bc + chr3L_5_20340001 chr3L_20340001 RAL-900_125b 2428 chr3L 20386892 20386970 chr3L 20387044 20387122 22 152 27.0 28.0 27.5 0.8 230 chr3L 20386892 intron fbl + chr3L 20387007 intron fbl + chr3L 20387122 intron fbl + chr3L_22_20385001 chr3L_20385001 RAL-900_125b 2429 chr3L 20394466 20394529 chr3L 20394600 20394663 18 134 20.0 24.5 22.2 0.8 197 chr3L 20394466 intergenic not near genes chr3L 20394564 intergenic not near genes chr3L 20394663 intergenic not near genes chr3L_18_20390001 chr3L_20390001 RAL-900_125b 2430 chr3L 20409544 20409581 chr3L 20410537 20410575 10 996 42.0 47.5 44.8 0.2 1031 chr3L 20409544 exon CG13248 - chr3L 20410060 intron CG13248 - chr3L 20410575 intergenic CG13248 - chr3L_10_20410001 chr3L_20410001 RAL-900_125b 2431 chr3L 20409539 20409563 chr3L 20410588 20410607 5 1026 40.5 43.5 42.0 0.1 1068 chr3L 20409539 exon CG13248 - chr3L 20410073 intron CG13248 - chr3L 20410607 intergenic CG13248 - chr3L_5_20410001 chr3L_20410001 RAL-900_125b 2432 chr3L 20421418 20421477 chr3L 20422226 20422279 13 805 15.0 20.0 17.5 0.7 861 chr3L 20421418 exon zye + chr3L 20421848 exon zye + chr3L 20422279 exon zye + chr3L_13_20420001 chr3L_20420001 RAL-900_125b 2433 chr3L 20443835 20443862 chr3L 20444009 20444036 14 174 25.0 22.5 23.8 0.6 201 chr3L 20443835 intron CG5910 + chr3L 20443936 intron CG5910 + chr3L 20444036 intron CG5910 + chr3L_14_20440001 chr3L_20440001 RAL-900_125b 2434 chr3L 20443863 20444136 chr3L 20444001 20444273 27 149 30.5 23.0 26.8 1.0 410 chr3L 20443863 intron CG5910 + chr3L 20444068 intron CG5910 + chr3L 20444273 intron CG5910 + chr3L_27_20440001 chr3L_20440001 RAL-900_125b 2435 chr3L 20447655 20447723 chr3L 20447784 20447857 7 133 11.0 10.0 10.5 0.6 202 chr3L 20447655 intron CG5910 + chr3L 20447756 intron CG5910 + chr3L 20447857 intron CG5910 + chr3L_7_20445001 chr3L_20445001 RAL-900_125b 2436 chr3L 20462538 20462601 chr3L 20462669 20462732 21 131 27.5 32.0 29.8 0.7 194 chr3L 20462538 intron atk - chr3L 20462635 intron atk - chr3L 20462732 intron atk - chr3L_21_20460001 chr3L_20460001 RAL-900_125b 2437 chr3L 20476714 20476776 chr3L 20484363 20484405 springer 31 7648 8.5 9.0 8.8 3.2 7691 chr3L 20476714 3` UTR isoQC + chr3L 20480560 intergenic not near genes chr3L 20484405 3` UTR ZnT77C - chr3L_31_20480001 chr3L_20480001 RAL-900_125b 2438 chr3L 20487623 20487671 chr3L 20488124 20488172 INE-1 7 501 36.0 26.0 31.0 0.2 549 chr3L 20487623 intron ZnT77C - chr3L 20487898 intron ZnT77C - chr3L 20488172 exon ZnT77C - chr3L_7_20485001 chr3L_20485001 RAL-900_125b 2439 chr3L 20525228 20525228 chr3L 22908066 22908067 13 2382838 29.5 43.5 36.5 0.3 2382839 chr3L 20525228 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_13_21715001 chr3L_21715001 RAL-900_125b 2440 chr3L 20525228 20525228 chr3L 24821492 24821494 7 4296265 29.5 28.5 29.0 0.2 4296266 chr3L 20525228 intron CG4825 - chr3L 22673361 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_7_22670001 chr3L_22670001 RAL-900_125b 2441 chr3L 20525229 20525229 chr3L 22908066 22908067 22 2382838 30.0 43.5 36.8 0.6 2382838 chr3L 20525229 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_22_21715001 chr3L_21715001 RAL-900_125b 2442 chr3L 20525229 20525229 chr3L 24821492 24821494 10 4296264 30.0 28.5 29.2 0.3 4296265 chr3L 20525229 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_10_22670001 chr3L_22670001 RAL-900_125b 2443 chr3L 20525230 20525230 chr3L 22908066 22908067 7 2382837 29.5 43.5 36.5 0.2 2382837 chr3L 20525230 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_7_21715001 chr3L_21715001 RAL-900_125b 2444 chr3L 20525230 20525230 chr3L 24821493 24821494 8 4296263 29.5 29.0 29.2 0.3 4296264 chr3L 20525230 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_8_22670001 chr3L_22670001 RAL-900_125b 2445 chr3L 20548322 20548364 chr3L 20548461 20548503 11 138 18.5 15.0 16.8 0.6 181 chr3L 20548322 intergenic not near genes chr3L 20548412 intergenic not near genes chr3L 20548503 intergenic not near genes chr3L_11_20545001 chr3L_20545001 RAL-900_125b 2446 chr3L 20590019 20590033 chr3L 20590608 20590622 412 6 586 21.0 7.5 14.2 0.4 603 chr3L 20590019 intergenic not near genes chr3L 20590320 intergenic not near genes chr3L 20590622 intergenic not near genes chr3L_6_20590001 chr3L_20590001 RAL-900_125b 2447 chr3L 20590037 20590046 chr3L 20590605 20590635 412 4 578 17.5 7.5 12.5 0.3 598 chr3L 20590037 intergenic not near genes chr3L 20590336 intergenic not near genes chr3L 20590635 intergenic not near genes chr3L_4_20590001 chr3L_20590001 RAL-900_125b 2448 chr3L 20590048 20590092 chr3L 20590603 20590656 412 15 578 6.5 6.0 6.2 2.1 608 chr3L 20590048 intergenic not near genes chr3L 20590352 intergenic not near genes chr3L 20590656 intergenic not near genes chr3L_15_20590001 chr3L_20590001 RAL-900_125b 2449 chr3L 20710718 20710786 chr3L 20710845 20710913 18 124 16.5 18.5 17.5 1.0 195 chr3L 20710718 intergenic not near genes chr3L 20710816 intergenic not near genes chr3L 20710913 intergenic not near genes chr3L_18_20710001 chr3L_20710001 RAL-900_125b 2450 chr3L 20739446 20739501 chr3L 20739611 20739666 9 165 21.5 18.0 19.8 0.4 220 chr3L 20739446 intron CG13252 + chr3L 20739556 intron CG13252 + chr3L 20739666 intron CG13252 + chr3L_9_20735001 chr3L_20735001 RAL-900_125b 2451 chr3L 20763753 20763810 chr3L 20764854 20764876 6 1084 25.0 18.5 21.8 0.3 1123 chr3L 20763753 intergenic not near genes chr3L 20764314 intergenic not near genes chr3L 20764876 intergenic not near genes chr3L_6_20760001 chr3L_20760001 RAL-900_125b 2452 chr3L 20794320 20794376 chr3L 20794464 20794527 11 150 28.0 25.0 26.5 0.4 207 chr3L 20794320 intergenic not near genes chr3L 20794424 intergenic not near genes chr3L 20794527 intergenic CR43705 - chr3L_11_20790001 chr3L_20790001 RAL-900_125b 2453 chr3L 13436185 13436217 chr3L 20815831 20815863 9 7379646 26.0 31.5 28.8 0.3 7379678 chr3L 13436185 intron CG10154 - chr3L 17126024 intron Rbp6 - chr3L 20815863 intron CG3618 - chr3L_9_17125001 chr3L_17125001 RAL-900_125b 2454 chr3L 20821243 20821302 chr3L 20824762 20824821 NOF 34 3519 10.5 15.0 12.8 2.5 3578 chr3L 20821243 intron Pka-R1 + chr3L 20823032 intron Pka-R1 + chr3L 20824821 intron Pka-R1 + chr3L_34_20820001 chr3L_20820001 RAL-900_125b 2455 chr3L 20826332 20826383 chr3L 20826567 20826623 13 240 24.5 22.5 23.5 0.5 291 chr3L 20826332 intron Pka-R1 + chr3L 20826478 intron Pka-R1 + chr3L 20826623 intron Pka-R1 + chr3L_13_20825001 chr3L_20825001 RAL-900_125b 2456 chr3L 20849223 20849291 chr3L 20849352 20849420 29 129 13.0 11.5 12.2 2.2 197 chr3L 20849223 intron CG32432 - chr3L 20849322 intron CG32432 - chr3L 20849420 intron CG32432 - chr3L_29_20845001 chr3L_20845001 RAL-900_125b 2457 chr3L 20866466 20866528 chr3L 20866600 20866635 20 129 25.5 30.5 28.0 0.7 169 chr3L 20866466 intron CG32432 - chr3L 20866550 intron CG32432 - chr3L 20866635 intron CG32432 - chr3L_20_20865001 chr3L_20865001 RAL-900_125b 2458 chr3L 20886740 20886783 chr3L 20886911 20886948 5 166 18.5 8.0 13.2 0.4 208 chr3L 20886740 intergenic CR44686 - chr3L 20886844 intergenic CR44686 - chr3L 20886948 intergenic CR44686 - chr3L_5_20885001 chr3L_20885001 RAL-900_125b 2459 chr3L 20886784 20886809 chr3L 20886910 20886974 9 161 13.5 8.0 10.8 0.8 190 chr3L 20886784 intergenic CR44686 - chr3L 20886879 intergenic CR44686 - chr3L 20886974 intergenic CR44686 - chr3L_9_20885001 chr3L_20885001 RAL-900_125b 2460 chr3L 20913708 20913720 chr3L 20913840 20913846 4 130 23.5 8.5 16.0 0.2 138 chr3L 20913708 intergenic CR43930 - chr3L 20913777 intergenic CR43930 - chr3L 20913846 intergenic CR43930 - chr3L_4_20910001 chr3L_20910001 RAL-900_125b 2461 chr3L 20913722 20913769 chr3L 20913829 20913900 22 122 9.0 7.0 8.0 2.4 178 chr3L 20913722 intergenic CR43930 - chr3L 20913811 intergenic CR43930 - chr3L 20913900 intergenic CR43930 - chr3L_22_20910001 chr3L_20910001 RAL-900_125b 2462 chr3L 20931768 20931825 chr3L 20931905 20931962 14 137 23.0 20.5 21.8 0.6 194 chr3L 20931768 intron fng - chr3L 20931865 intron fng - chr3L 20931962 intron fng - chr3L_14_20930001 chr3L_20930001 RAL-900_125b 2463 chr3L 21010321 21010397 chr3L 21010478 21010555 16 156 27.0 24.0 25.5 0.6 234 chr3L 21010321 intron skd - chr3L 21010438 intron skd - chr3L 21010555 intron skd - chr3L_16_21010001 chr3L_21010001 RAL-900_125b 2464 chr3L 21014879 21014903 chr3L 21023403 21023418 Tirant 9 8523 19.5 13.5 16.5 0.5 8539 chr3L 21014879 intron skd - chr3L 21019148 intron skd - chr3L 21023418 intron skd - chr3L_9_21015001 chr3L_21015001 RAL-900_125b 2465 chr3L 21014904 21014942 chr3L 21023400 21023463 Tirant 17 8511 8.5 11.5 10.0 1.5 8559 chr3L 21014904 intron skd - chr3L 21019184 intron skd - chr3L 21023463 intron skd - chr3L_17_21015001 chr3L_21015001 RAL-900_125b 2466 chr3L 21044382 21044445 chr3L 21044530 21044592 12 145 15.5 22.5 19.0 0.6 210 chr3L 21044382 intron siz + chr3L 21044487 intron siz + chr3L 21044592 intron siz + chr3L_12_21040001 chr3L_21040001 RAL-900_125b 2467 chr3L 21079795 21079817 chr3L 21079970 21079981 8 189 12.0 26.5 19.2 0.4 186 chr3L 21079795 intron ko - chr3L 21079888 intron ko - chr3L 21079981 intron ko - chr3L_8_21075001 chr3L_21075001 RAL-900_125b 2468 chr3L 21082164 21082228 chr3L 21082292 21082351 17 128 27.5 22.5 25.0 0.7 187 chr3L 21082164 intron ko - chr3L 21082258 intron ko - chr3L 21082351 intron ko - chr3L_17_21080001 chr3L_21080001 RAL-900_125b 2469 chr3L 21093732 21093805 chr3L 21093895 21093943 13 160 18.0 20.5 19.2 0.6 211 chr3L 21093732 intron ko - chr3L 21093838 intron ko - chr3L 21093943 intron ko - chr3L_13_21090001 chr3L_21090001 RAL-900_125b 2470 chr3L 21130529 21130590 chr3L 21130773 21130834 15 244 25.0 23.5 24.2 0.6 305 chr3L 21130529 intron ko - chr3L 21130682 intron ko - chr3L 21130834 5` UTR ko - chr3L_15_21130001 chr3L_21130001 RAL-900_125b 2471 chr3L 21145279 21145289 chr3L 21145409 21145419 5 130 26.0 10.5 18.2 0.3 140 chr3L 21145279 intron Ac78C - chr3L 21145349 intron Ac78C - chr3L 21145419 intron Ac78C - chr3L_5_21145001 chr3L_21145001 RAL-900_125b 2472 chr3L 21151824 21151882 chr3L 21156958 21157016 flea 28 5134 7.0 8.0 7.5 3.3 5192 chr3L 21151824 intron Ac78C - chr3L 21154420 intron Ac78C - chr3L 21157016 intron Ac78C - chr3L_28_21150001 chr3L_21150001 RAL-900_125b 2473 chr3L 21163189 21163247 chr3L 21163321 21163379 7 131 19.5 22.0 20.8 0.3 190 chr3L 21163189 intron Ac78C - chr3L 21163284 intron Ac78C - chr3L 21163379 intron Ac78C - chr3L_7_21160001 chr3L_21160001 RAL-900_125b 2474 chr3L 21172806 21172872 chr3L 21172959 21173000 17 151 25.0 25.0 25.0 0.7 194 chr3L 21172806 intergenic chb +,asparagine-synthetase + chr3L 21172903 5` UTR chb + chr3L 21173000 5` UTR chb + chr3L_17_21170001 chr3L_21170001 RAL-900_125b 2475 chr3L 21211839 21211848 chr3L 21211965 21211990 5 131 31.5 27.5 29.5 0.2 151 chr3L 21211839 intron CG10508 + chr3L 21211914 intron CG10508 + chr3L 21211990 intron CG10508 + chr3L_5_21210001 chr3L_21210001 RAL-900_125b 2476 chr3L 21252461 21252485 chr3L 21252590 21252627 4 137 20.5 17.0 18.8 0.2 166 chr3L 21252461 intron Eip78C + chr3L 21252544 intron Eip78C + chr3L 21252627 intron Eip78C + chr3L_4_21250001 chr3L_21250001 RAL-900_125b 2477 chr3L 21274161 21274231 chr3L 21274382 21274452 19 220 29.5 21.0 25.2 0.7 291 chr3L 21274161 intron AcCoAS - chr3L 21274306 intron AcCoAS - chr3L 21274452 intron AcCoAS - chr3L_19_21270001 chr3L_21270001 RAL-900_125b 2478 chr3L 21301690 21301762 chr3L 21301826 21301898 33 135 22.0 26.5 24.2 1.3 208 chr3L 21301690 5` UTR CR45432 + chr3L 21301794 5` UTR,3` UTR CR45432 +,CG11309 - chr3L 21301898 5` UTR,3` UTR CR45432 +,CG11309 - chr3L_33_21300001 chr3L_21300001 RAL-900_125b 2479 chr3L 21306103 21306173 chr3L 21315312 21315382 roo 37 9209 12.5 9.0 10.8 3.1 9279 chr3L 21306103 3` UTR CG7632 + chr3L 21310742 intron Pc - chr3L 21315382 3` UTR Pc - chr3L_37_21310001 chr3L_21310001 RAL-900_125b 2480 chr3L 21319485 21319550 chr3L 21319625 21319690 19 140 21.0 23.0 22.0 0.8 205 chr3L 21319485 5` UTR Rab26 + chr3L 21319588 5` UTR Rab26 + chr3L 21319690 5` UTR Rab26 + chr3L_19_21315001 chr3L_21315001 RAL-900_125b 2481 chr3L 21372681 21372745 chr3L 21379239 21379302 McClintock 14 6557 19.0 21.5 20.2 0.7 6621 chr3L 21372681 intergenic not near genes chr3L 21375992 intergenic not near genes chr3L 21379302 intergenic not near genes chr3L_14_21375001 chr3L_21375001 RAL-900_125b 2482 chr3L 21406952 21407018 chr3L 21407081 21407147 25 127 11.5 14.0 12.8 1.8 195 chr3L 21406952 intron rgn + chr3L 21407050 intron rgn + chr3L 21407147 intron rgn + chr3L_25_21405001 chr3L_21405001 RAL-900_125b 2483 chr3L 21414487 21414544 chr3L 21414611 21414670 7 124 22.0 21.0 21.5 0.3 183 chr3L 21414487 intron rgn + chr3L 21414578 intron rgn + chr3L 21414670 intron rgn + chr3L_7_21410001 chr3L_21410001 RAL-900_125b 2484 chr3L 21415091 21415106 chr3L 21415224 21415239 4 133 24.5 18.5 21.5 0.2 148 chr3L 21415091 intron rgn + chr3L 21415165 intron rgn + chr3L 21415239 intron rgn + chr3L_4_21415001 chr3L_21415001 RAL-900_125b 2485 chr3L 21415107 21415164 chr3L 21415220 21415297 12 131 18.0 18.0 18.0 0.6 190 chr3L 21415107 intron rgn + chr3L 21415202 intron rgn + chr3L 21415297 intron rgn + chr3L_12_21415001 chr3L_21415001 RAL-900_125b 2486 chr3L 21427817 21427860 chr3L 21427944 21427982 12 131 13.5 16.5 15.0 0.8 165 chr3L 21427817 intron,5` UTR barc -,CG33288 + chr3L 21427900 intron,5` UTR barc -,CG33288 + chr3L 21427982 intron,5` UTR barc -,CG33288 + chr3L_12_21425001 chr3L_21425001 RAL-900_125b 2487 chr3L 21427861 21427874 chr3L 21427943 21428017 5 131 12.5 16.5 14.5 0.3 156 chr3L 21427861 intron,5` UTR barc -,CG33288 + chr3L 21427939 intron,5` UTR barc -,CG33288 + chr3L 21428017 intron,5` UTR barc -,CG33288 + chr3L_5_21425001 chr3L_21425001 RAL-900_125b 2488 chr3L 21498830 21498835 chr3L 21500501 21500521 1360 5 1680 11.5 13.5 12.5 0.4 1691 chr3L 21498830 5` UTR,intron CR43933 +,Glg1 - chr3L 21499676 intron Glg1 - chr3L 21500521 intron Glg1 - chr3L_5_21495001 chr3L_21495001 RAL-900_125b 2489 chr3L 21498839 21498855 chr3L 21500489 21500541 1360 7 1679 8.0 10.0 9.0 0.7 1702 chr3L 21498839 intron Glg1 - chr3L 21499690 intron Glg1 - chr3L 21500541 intron Glg1 - chr3L_7_21495001 chr3L_21495001 RAL-900_125b 2490 chr3L 21501133 21501161 chr3L 21501272 21501305 1360 6 143 22.5 33.0 27.8 0.2 172 chr3L 21501133 intron Glg1 - chr3L 21501219 intron Glg1 - chr3L 21501305 intron Glg1 - chr3L_6_21500001 chr3L_21500001 RAL-900_125b 2491 chr3L 21637285 21637346 chr3L 21637422 21637483 25 137 16.0 20.5 18.2 1.3 198 chr3L 21637285 exon CG32444 + chr3L 21637384 intron CG32444 + chr3L 21637483 intron CG32444 + chr3L_25_21635001 chr3L_21635001 RAL-900_125b 2492 chr3L 21639160 21639224 chr3L 21639287 21639353 12 129 25.0 25.5 25.2 0.5 193 chr3L 21639160 intergenic CG32444 +,CG32445 + chr3L 21639256 intergenic CG32445 +,CG32444 + chr3L 21639353 intergenic CG32445 +,CG32444 + chr3L_12_21635001 chr3L_21635001 RAL-900_125b 2493 chr3L 21671010 21671084 chr3L 21671208 21671282 20 197 21.5 23.0 22.2 0.9 272 chr3L 21671010 intergenic not near genes chr3L 21671146 intergenic not near genes chr3L 21671282 intergenic not near genes chr3L_20_21670001 chr3L_21670001 RAL-900_125b 2494 chr3L 21712143 21712167 chr3L 21712272 21712296 4 122 21.5 21.5 21.5 0.2 153 chr3L 21712143 intergenic not near genes chr3L 21712220 intergenic not near genes chr3L 21712296 intergenic not near genes chr3L_4_21710001 chr3L_21710001 RAL-900_125b 2495 chr3L 21736279 21736374 chr3L 21736545 21736625 16 258 17.0 19.5 18.2 0.8 346 chr3L 21736279 intergenic CR43888 + chr3L 21736452 intergenic CR43888 + chr3L 21736625 intergenic CR43888 + chr3L_16_21735001 chr3L_21735001 RAL-900_125b 2496 chr3L 21738592 21738642 chr3L 21738734 21738784 10 142 33.0 29.0 31.0 0.3 192 chr3L 21738592 intergenic CG14567 - chr3L 21738688 intergenic CG14567 - chr3L 21738784 intergenic CG14567 - chr3L_10_21735001 chr3L_21735001 RAL-900_125b 2497 chr3L 21749278 21749333 chr3L 21754488 21754542 Doc 15 5209 10.5 10.0 10.2 1.3 5264 chr3L 21749278 intron Syn1 - chr3L 21751910 intron Syn1 - chr3L 21754542 intron Syn1 - chr3L_15_21750001 chr3L_21750001 RAL-900_125b 2498 chr3L 21769007 21769073 chr3L 21769144 21769210 22 137 18.5 24.0 21.2 1.0 203 chr3L 21769007 intron,intron Syn1 -,CG42689 + chr3L 21769108 intron,intron Syn1 -,CG42689 + chr3L 21769210 intron,intron Syn1 -,CG42689 + chr3L_22_21765001 chr3L_21765001 RAL-900_125b 2499 chr3L 21770021 21770040 chr3L 21770138 21770177 11 132 13.0 14.5 13.8 0.7 156 chr3L 21770021 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770099 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770177 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L_11_21770001 chr3L_21770001 RAL-900_125b 2500 chr3L 21776633 21776693 chr3L 21776766 21776830 8 135 28.0 33.0 30.5 0.3 197 chr3L 21776633 intron,intron CG42689 +,CG42552 + chr3L 21776732 intron,intron CG42689 +,CG42552 + chr3L 21776830 exon,intron CG42689 +,CG42552 + chr3L_8_21775001 chr3L_21775001 RAL-900_125b 2501 chr3L 21785728 21785799 chr3L 21786101 21786156 15 367 29.0 31.0 30.0 0.5 428 chr3L 21785728 intergenic not near genes chr3L 21785942 intergenic not near genes chr3L 21786156 intergenic not near genes chr3L_15_21785001 chr3L_21785001 RAL-900_125b 2502 chr3L 21799898 21799960 chr3L 21800033 21800095 25 135 21.0 21.5 21.2 1.1 197 chr3L 21799898 intergenic not near genes chr3L 21799996 intergenic not near genes chr3L 21800095 intergenic not near genes chr3L_25_21795001 chr3L_21795001 RAL-900_125b 2503 chr3L 21809947 21809962 chr3L 21810067 21810107 7 132 12.0 15.0 13.5 0.5 160 chr3L 21809947 intron eg + chr3L 21810027 intron eg + chr3L 21810107 intron eg + chr3L_7_21810001 chr3L_21810001 RAL-900_125b 2504 chr3L 21824456 21824481 chr3L 21824605 21824630 7 149 28.0 22.0 25.0 0.3 174 chr3L 21824456 3` UTR CG7407 + chr3L 21824543 3` UTR CG7407 + chr3L 21824630 intergenic CG7407 +,CG7414 + chr3L_7_21820001 chr3L_21820001 RAL-900_125b 2505 chr3L 21824482 21824520 chr3L 21824600 21824669 19 147 26.0 20.5 23.2 0.8 187 chr3L 21824482 3` UTR CG7407 + chr3L 21824576 intergenic CG7407 +,CG7414 + chr3L 21824669 intergenic CG7414 +,CG7407 + chr3L_19_21820001 chr3L_21820001 RAL-900_125b 2506 chr3L 21828908 21828959 chr3L 21829040 21829054 5 123 16.5 16.5 16.5 0.3 146 chr3L 21828908 intergenic CR43309 -,CG32448 - chr3L 21828981 intergenic CR43309 - chr3L 21829054 intergenic CR43309 - chr3L_5_21825001 chr3L_21825001 RAL-900_125b 2507 chr3L 21836684 21836756 chr3L 21836820 21836892 15 136 24.5 23.0 23.8 0.6 208 chr3L 21836684 3` UTR,3` UTR Nopp140 +,P5CDh1 - chr3L 21836788 3` UTR P5CDh1 - chr3L 21836892 3` UTR P5CDh1 - chr3L_15_21835001 chr3L_21835001 RAL-900_125b 2508 chr3L 21852261 21852277 chr3L 21852349 21852420 10 122 23.5 27.0 25.2 0.4 159 chr3L 21852261 intron mub + chr3L 21852340 intron mub + chr3L 21852420 intron mub + chr3L_10_21850001 chr3L_21850001 RAL-900_125b 2509 chr3L 21874059 21874099 chr3L 21874191 21874231 4 132 18.0 14.0 16.0 0.2 172 chr3L 21874059 intron mub + chr3L 21874145 intron mub + chr3L 21874231 intron mub + chr3L_4_21870001 chr3L_21870001 RAL-900_125b 2510 chr3L 21905297 21905328 chr3L 21905427 21905448 6 126 22.5 16.5 19.5 0.3 151 chr3L 21905297 intron mub + chr3L 21905372 intron mub + chr3L 21905448 intron mub + chr3L_6_21905001 chr3L_21905001 RAL-900_125b 2511 chr3L 21905342 21905505 chr3L 21905420 21905656 15 132 19.0 16.5 17.8 0.8 314 chr3L 21905342 intron mub + chr3L 21905499 intron mub + chr3L 21905656 intron mub + chr3L_15_21905001 chr3L_21905001 RAL-900_125b 2512 chr3L 21912571 21912614 chr3L 21912977 21913027 4 411 23.0 11.5 17.2 0.2 456 chr3L 21912571 intron mub + chr3L 21912799 intron mub + chr3L 21913027 intron mub + chr3L_4_21910001 chr3L_21910001 RAL-900_125b 2513 chr3L 21950288 21950357 chr3L 21950415 21950484 29 127 21.0 24.0 22.5 1.2 196 chr3L 21950288 exon CG7448 + chr3L 21950386 exon CG7448 + chr3L 21950484 exon CG7448 + chr3L_29_21950001 chr3L_21950001 RAL-900_125b 2514 chr3L 21966431 21966495 chr3L 21966564 21966628 14 131 25.0 26.5 25.8 0.5 197 chr3L 21966431 intron CS-2 + chr3L 21966530 intron CS-2 + chr3L 21966628 intron CS-2 + chr3L_14_21965001 chr3L_21965001 RAL-900_125b 2515 chr3L 21971472 21971528 chr3L 21971702 21971778 10 244 17.0 22.0 19.5 0.5 306 chr3L 21971472 intergenic not near genes chr3L 21971625 intergenic CG7470 + chr3L 21971778 intergenic CG7470 + chr3L_10_21970001 chr3L_21970001 RAL-900_125b 2516 chr3L 21972520 21972589 chr3L 21972728 21972770 10 205 23.5 19.0 21.2 0.5 250 chr3L 21972520 intron CG7470 + chr3L 21972645 intron CG7470 + chr3L 21972770 intron CG7470 + chr3L_10_21970001 chr3L_21970001 RAL-900_125b 2517 chr3L 22008810 22008823 chr3L 22008937 22008950 4 127 18.5 19.0 18.8 0.2 140 chr3L 22008810 intergenic not near genes chr3L 22008880 intergenic not near genes chr3L 22008950 intergenic not near genes chr3L_4_22005001 chr3L_22005001 RAL-900_125b 2518 chr3L 22008828 22008881 chr3L 22008934 22008971 16 116 19.0 18.5 18.8 0.8 143 chr3L 22008828 intergenic not near genes chr3L 22008900 intergenic not near genes chr3L 22008971 intergenic not near genes chr3L_16_22005001 chr3L_22005001 RAL-900_125b 2519 chr3L 22092763 22092827 chr3L 22092914 22092978 15 150 25.0 27.0 26.0 0.6 215 chr3L 22092763 intergenic not near genes chr3L 22092870 intergenic not near genes chr3L 22092978 intergenic not near genes chr3L_15_22090001 chr3L_22090001 RAL-900_125b 2520 chr3L 22099632 22099696 chr3L 22105868 22105932 3S18 39 6235 11.5 8.5 10.0 3.5 6300 chr3L 22099632 intergenic not near genes chr3L 22102782 intergenic not near genes chr3L 22105932 intergenic not near genes chr3L_39_22100001 chr3L_22100001 RAL-900_125b 2521 chr3L 22130450 22130522 chr3L 22130646 22130718 23 196 9.0 6.0 7.5 2.7 268 chr3L 22130450 intergenic not near genes chr3L 22130584 intergenic not near genes chr3L 22130718 intergenic not near genes chr3L_23_22130001 chr3L_22130001 RAL-900_125b 2522 chr3L 22152155 22152201 chr3L 22152268 22152329 4 123 23.5 24.5 24.0 0.2 174 chr3L 22152155 intron olf413 + chr3L 22152242 intron olf413 + chr3L 22152329 intron olf413 + chr3L_4_22150001 chr3L_22150001 RAL-900_125b 2523 chr3L 22166397 22166460 chr3L 22166525 22166588 9 127 25.0 28.5 26.8 0.3 191 chr3L 22166397 intron olf413 + chr3L 22166492 intron olf413 + chr3L 22166588 intron olf413 + chr3L_9_22165001 chr3L_22165001 RAL-900_125b 2524 chr3L 22169408 22169477 chr3L 22169551 22169620 15 141 22.5 26.0 24.2 0.6 212 chr3L 22169408 intron olf413 + chr3L 22169514 intron olf413 + chr3L 22169620 intron olf413 + chr3L_15_22165001 chr3L_22165001 RAL-900_125b 2525 chr3L 22194280 22194315 chr3L 22194407 22194442 17 123 8.0 14.5 11.2 1.4 162 chr3L 22194280 intron olf413 + chr3L 22194361 intron olf413 + chr3L 22194442 intron olf413 + chr3L_17_22190001 chr3L_22190001 RAL-900_125b 2526 chr3L 22196423 22196455 chr3L 22196671 22196709 6 254 19.0 22.0 20.5 0.3 286 chr3L 22196423 intron olf413 + chr3L 22196566 intron olf413 + chr3L 22196709 intron olf413 + chr3L_6_22195001 chr3L_22195001 RAL-900_125b 2527 chr3L 22312242 22312305 chr3L 22312726 22312777 10 475 14.5 16.5 15.5 0.6 535 chr3L 22312242 intron Ten-m - chr3L 22312510 intron Ten-m - chr3L 22312777 intron Ten-m - chr3L_10_22310001 chr3L_22310001 RAL-900_125b 2528 chr3L 22314834 22314907 chr3L 22315098 22315171 21 262 8.5 5.5 7.0 2.6 337 chr3L 22314834 intron Ten-m - chr3L 22315002 intron Ten-m - chr3L 22315171 intron Ten-m - chr3L_21_22315001 chr3L_22315001 RAL-900_125b 2529 chr3L 22411346 22411389 chr3L 22411473 22411516 12 123 14.0 18.5 16.2 0.7 170 chr3L 22411346 intergenic not near genes chr3L 22411431 intergenic not near genes chr3L 22411516 intergenic not near genes chr3L_12_22410001 chr3L_22410001 RAL-900_125b 2530 chr3L 22447153 22447230 chr3L 22447294 22447370 27 139 4.0 10.0 7.0 3.4 217 chr3L 22447153 intergenic not near genes chr3L 22447262 intergenic not near genes chr3L 22447370 intergenic not near genes chr3L_27_22445001 chr3L_22445001 RAL-900_125b 2531 chr3L 22477030 22477043 chr3L 22477165 22477171 4 136 16.5 22.0 19.2 0.2 141 chr3L 22477030 intergenic not near genes chr3L 22477100 intergenic not near genes chr3L 22477171 intergenic not near genes chr3L_4_22475001 chr3L_22475001 RAL-900_125b 2532 chr3L 22507093 22507138 chr3L 22507229 22507274 8 135 21.5 29.0 25.2 0.3 181 chr3L 22507093 intergenic not near genes chr3L 22507184 intergenic not near genes chr3L 22507274 intergenic not near genes chr3L_8_22505001 chr3L_22505001 RAL-900_125b 2533 chr3L 22543042 22543096 chr3L 22543169 22543223 17 127 23.5 23.0 23.2 0.7 181 chr3L 22543042 intergenic not near genes chr3L 22543132 intergenic not near genes chr3L 22543223 intergenic not near genes chr3L_17_22540001 chr3L_22540001 RAL-900_125b 2534 chr3L 22554379 22554448 chr3L 22554505 22554574 9 126 22.0 23.5 22.8 0.4 195 chr3L 22554379 intergenic not near genes chr3L 22554476 intergenic not near genes chr3L 22554574 intergenic not near genes chr3L_9_22550001 chr3L_22550001 RAL-900_125b 2535 chr3L 22555727 22555788 chr3L 22563247 22563287 blood 11 7515 11.5 5.5 8.5 1.2 7560 chr3L 22555727 intergenic not near genes chr3L 22559507 intergenic not near genes chr3L 22563287 intergenic not near genes chr3L_11_22555001 chr3L_22555001 RAL-900_125b 2536 chr3L 22570380 22570446 chr3L 22570574 22570636 19 191 16.5 18.5 17.5 1.0 256 chr3L 22570380 intergenic not near genes chr3L 22570508 intergenic not near genes chr3L 22570636 intergenic not near genes chr3L_19_22570001 chr3L_22570001 RAL-900_125b 2537 chr3L 22577583 22577643 chr3L 22582421 22582454 Doc 24 4835 9.5 13.5 11.5 1.9 4871 chr3L 22577583 intergenic not near genes chr3L 22580018 intergenic not near genes chr3L 22582454 3` UTR CG14459 - chr3L_24_22580001 chr3L_22580001 RAL-900_125b 2538 chr3L 22617149 22617216 chr3L 22624651 22624702 blood 31 7499 9.5 13.0 11.2 2.5 7553 chr3L 22617149 intron CG14459 - chr3L 22620926 intron CG14459 - chr3L 22624702 intron CG14459 - chr3L_31_22620001 chr3L_22620001 RAL-900_125b 2539 chr3L 22630706 22630763 chr3L 22630818 22630832 12 118 13.5 11.0 12.2 0.9 126 chr3L 22630706 intron CG14459 - chr3L 22630769 intron CG14459 - chr3L 22630832 intron CG14459 - chr3L_12_22630001 chr3L_22630001 RAL-900_125b 2540 chr3L 22652280 22652345 chr3L 22652468 22652533 10 188 22.0 19.5 20.8 0.5 253 chr3L 22652280 exon CG33772 - chr3L 22652406 intron CG33772 - chr3L 22652533 intergenic CG33772 - chr3L_10_22650001 chr3L_22650001 RAL-900_125b 2541 chr3L 22705832 22705870 chr3L 22706013 22706084 8 205 12.0 28.5 20.2 0.4 252 chr3L 22705832 intergenic not near genes chr3L 22705958 intergenic not near genes chr3L 22706084 intergenic not near genes chr3L_8_22705001 chr3L_22705001 RAL-900_125b 2542 chr3L 22736320 22736383 chr3L 22738068 22738131 16 1748 26.0 21.5 23.8 0.6 1811 chr3L 22736320 intron CG11241 - chr3L 22737226 intron CG11241 - chr3L 22738131 intron CG11241 - chr3L_16_22735001 chr3L_22735001 RAL-900_125b 2543 chr3L 22761346 22761397 chr3L 22766830 22766881 Ivk 18 5484 20.5 17.5 19.0 0.9 5535 chr3L 22761346 intron SPoCk + chr3L 22764114 intron SPoCk + chr3L 22766881 intron SPoCk + chr3L_18_22760001 chr3L_22760001 RAL-900_125b 2544 chr3L 22849417 22849425 chr3L 22849552 22849560 4 135 24.0 31.5 27.8 0.1 143 chr3L 22849417 intergenic not near genes chr3L 22849488 intergenic not near genes chr3L 22849560 intergenic not near genes chr3L_4_22845001 chr3L_22845001 RAL-900_125b 2545 chr3L 22853422 22853707 chr3L 22853559 22853843 22 136 30.0 32.5 31.2 0.7 421 chr3L 22853422 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853632 5` UTR CR43426 + chr3L 22853843 5` UTR CR43426 + chr3L_22_22850001 chr3L_22850001 RAL-900_125b 2546 chr3L 22865941 22866003 chr3L 22867124 22867185 Doc 27 1182 9.0 10.5 9.8 2.5 1244 chr3L 22865941 exon CG33170 + chr3L 22866563 intron CG33170 + chr3L 22867185 intron CG33170 + chr3L_27_22865001 chr3L_22865001 RAL-900_125b 2547 chr3L 22894215 22894244 chr3L 22894360 22894377 10 141 17.5 19.5 18.5 0.5 162 chr3L 22894215 intergenic slif + chr3L 22894296 intergenic slif + chr3L 22894377 intergenic not near genes chr3L_10_22890001 chr3L_22890001 RAL-900_125b 2548 chr3L 9307795 9307796 chr3L 22908066 22908066 4 13600270 36.5 43.5 40.0 0.1 13600271 chr3L 9307795 intergenic not near genes chr3L 16107930 intron Zn72D - chr3L 22908066 intergenic not near genes chr3L_4_16105001 chr3L_16105001 RAL-900_125b 2549 chr3L 19220633 19220637 chr3L 22908066 22908066 23 3687431 39.0 43.5 41.2 0.5 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_23_21060001 chr3L_21060001 RAL-900_125b 2550 chr3L 20525228 20525232 chr3L 22908066 22908066 50 2382837 29.0 43.5 36.2 1.3 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_50_21715001 chr3L_21715001 RAL-900_125b 2551 chr3L 19220633 19220637 chr3L 22908067 22908067 17 3687432 39.0 43.0 41.0 0.4 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_17_21060001 chr3L_21060001 RAL-900_125b 2552 chr3L 20525228 20525230 chr3L 22908067 22908067 19 2382837 29.5 43.0 36.2 0.5 2382839 chr3L 20525228 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_19_21715001 chr3L_21715001 RAL-900_125b 2553 chr3L 22908977 22909046 chr3L 22909118 22909185 34 139 8.5 11.0 9.8 3.1 208 chr3L 22908977 intergenic CR45661 + chr3L 22909081 intergenic CR45661 + chr3L 22909185 intergenic CR45661 + chr3L_34_22905001 chr3L_22905001 RAL-900_125b 2554 chr3L 22982437 22982478 chr3L 22982885 22982926 INE-1 8 448 23.5 20.0 21.8 0.4 489 chr3L 22982437 intergenic not near genes chr3L 22982682 intergenic not near genes chr3L 22982926 intergenic not near genes chr3L_8_22980001 chr3L_22980001 RAL-900_125b 2555 chr3L 22989824 22989880 chr3L 22996848 22996904 297 21 7021 9.5 9.5 9.5 2.0 7080 chr3L 22989824 intergenic not near genes chr3L 22993364 intergenic not near genes chr3L 22996904 intergenic not near genes chr3L_21_22990001 chr3L_22990001 RAL-900_125b 2556 chr3L 22997030 22997099 chr3L 22997165 22997234 21 135 22.5 29.0 25.8 0.8 204 chr3L 22997030 intergenic not near genes chr3L 22997132 intergenic not near genes chr3L 22997234 intergenic not near genes chr3L_21_22995001 chr3L_22995001 RAL-900_125b 2557 chr3L 23013645 23013705 chr3L 23014543 23014598 13 893 16.0 47.0 31.5 0.4 953 chr3L 23013645 intron nrm + chr3L 23014122 exon nrm + chr3L 23014598 intron nrm + chr3L_13_23010001 chr3L_23010001 RAL-900_125b 2558 chr3L 23165877 23165908 chr3L 23173371 23173404 Quasimodo 8 7494 9.0 6.0 7.5 0.9 7527 chr3L 23165877 intergenic not near genes chr3L 23169640 intergenic not near genes chr3L 23173404 intergenic not near genes chr3L_8_23165001 chr3L_23165001 RAL-900_125b 2559 chr3L 23205413 23205590 chr3L 23205692 23205724 14 258 11.0 10.0 10.5 1.2 311 chr3L 23205413 intergenic not near genes chr3L 23205568 intergenic not near genes chr3L 23205724 intergenic not near genes chr3L_14_23205001 chr3L_23205001 RAL-900_125b 2560 chr3L 23257351 23257425 chr3L 23257536 23257610 27 183 21.0 17.0 19.0 1.4 259 chr3L 23257351 intron nAChRalpha4 + chr3L 23257480 intron nAChRalpha4 + chr3L 23257610 intron nAChRalpha4 + chr3L_27_23255001 chr3L_23255001 RAL-900_125b 2561 chr3L 23456052 23456062 chr3L 23456629 23456641 6 579 29.0 9.5 19.2 0.3 589 chr3L 23456052 intergenic not near genes chr3L 23456346 intergenic not near genes chr3L 23456641 intergenic not near genes chr3L_6_23455001 chr3L_23455001 RAL-900_125b 2562 chr3L 23470371 23470383 chr3L 23470672 23470682 5 301 16.0 20.5 18.2 0.3 311 chr3L 23470371 intergenic not near genes chr3L 23470526 intergenic not near genes chr3L 23470682 intergenic not near genes chr3L_5_23470001 chr3L_23470001 RAL-900_125b 2563 chr3L 23665486 23665523 chr3L 23665626 23665663 gypsy8 12 140 46.0 34.5 40.2 0.3 177 chr3L 23665486 intron AGO3 + chr3L 23665574 intron AGO3 + chr3L 23665663 intron AGO3 + chr3L_12_23665001 chr3L_23665001 RAL-900_125b 2564 chr3L 23666258 23666302 chr3L 23666386 23666456 8 141 31.5 47.0 39.2 0.2 198 chr3L 23666258 intron AGO3 + chr3L 23666357 intron AGO3 + chr3L 23666456 intron AGO3 + chr3L_8_23665001 chr3L_23665001 RAL-900_125b 2565 chr3L 23704017 23704037 chr3L 23704152 23704172 7 133 12.5 21.5 17.0 0.4 155 chr3L 23704017 intergenic not near genes chr3L 23704094 intergenic not near genes chr3L 23704172 intergenic not near genes chr3L_7_23700001 chr3L_23700001 RAL-900_125b 2566 chr3L 23750931 23751007 chr3L 23751093 23751158 10 155 38.5 45.5 42.0 0.2 227 chr3L 23750931 intergenic not near genes chr3L 23751044 intergenic not near genes chr3L 23751158 intergenic not near genes chr3L_10_23750001 chr3L_23750001 RAL-900_125b 2567 chr3L 23815286 23815320 chr3L 23815424 23815447 5 135 13.5 18.5 16.0 0.3 161 chr3L 23815286 intergenic not near genes chr3L 23815366 intergenic not near genes chr3L 23815447 intergenic not near genes chr3L_5_23815001 chr3L_23815001 RAL-900_125b 2568 chr3L 23848800 23848839 chr3L 23849674 23849708 R1A1-element 12 871 8.0 9.0 8.5 1.3 908 chr3L 23848800 intron CG40470 - chr3L 23849254 intron CG40470 - chr3L 23849708 intron CG40470 - chr3L_12_23845001 chr3L_23845001 RAL-900_125b 2569 chr3L 23875478 23875547 chr3L 23875609 23875668 22 126 6.0 9.5 7.8 2.5 190 chr3L 23875478 intron CG40470 - chr3L 23875573 intron CG40470 - chr3L 23875668 intron CG40470 - chr3L_22_23875001 chr3L_23875001 RAL-900_125b 2570 chr3L 24012372 24012426 chr3L 24020763 24020817 roo 25 8390 9.0 9.5 9.2 2.5 8445 chr3L 24012372 intergenic not near genes chr3L 24016594 intergenic not near genes chr3L 24020817 intergenic not near genes chr3L_25_24015001 chr3L_24015001 RAL-900_125b 2571 chr3L 24050720 24050735 chr3L 24051072 24051087 5 352 21.0 29.5 25.2 0.2 367 chr3L 24050720 intergenic not near genes chr3L 24050904 intergenic not near genes chr3L 24051087 intergenic not near genes chr3L_5_24050001 chr3L_24050001 RAL-900_125b 2572 chr3L 24168751 24168792 chr3L 24176129 24176148 ZAM 9 7371 15.5 8.0 11.8 0.7 7397 chr3L 24168751 intron Snap25 + chr3L 24172450 intron Snap25 + chr3L 24176148 intron Snap25 + chr3L_9_24170001 chr3L_24170001 RAL-900_125b 2573 chr3L 24168801 24168817 chr3L 24176123 24176123 ZAM 10 7353 12.0 6.0 9.0 1.0 7322 chr3L 24168801 intron Snap25 + chr3L 24172462 intron Snap25 + chr3L 24176123 intron Snap25 + chr3L_10_24170001 chr3L_24170001 RAL-900_125b 2574 chr3L 24303984 24304000 chr3L 24304137 24304153 4 153 13.0 15.5 14.2 0.3 169 chr3L 24303984 intergenic not near genes chr3L 24304068 intergenic not near genes chr3L 24304153 intergenic not near genes chr3L_4_24300001 chr3L_24300001 RAL-900_125b 2575 chr3L 24722439 24722461 chr3L 24722648 24722670 5 209 26.0 21.0 23.5 0.2 231 chr3L 24722439 intergenic not near genes chr3L 24722554 intergenic not near genes chr3L 24722670 intergenic not near genes chr3L_5_24720001 chr3L_24720001 RAL-900_125b 2576 chr3L 24791837 24791871 chr3L 24796674 24796698 Doc 15 4839 6.5 5.5 6.0 2.1 4861 chr3L 24791837 intergenic not near genes chr3L 24794268 intergenic not near genes chr3L 24796698 intergenic not near genes chr3L_15_24790001 chr3L_24790001 RAL-900_125b 2577 chr3L 18198930 18198931 chr3L 24821492 24821492 9 6622562 3.5 28.5 16.0 0.5 6622562 chr3L 18198930 intergenic not near genes chr3L 21510211 intron M6 + chr3L 24821492 intergenic not near genes chr3L_9_21510001 chr3L_21510001 RAL-900_125b 2578 chr3L 20525230 20525230 chr3L 24821492 24821492 6 4296262 29.5 28.5 29.0 0.2 4296262 chr3L 20525230 intron CG4825 - chr3L 22673361 intron CG14457 + chr3L 24821492 intergenic not near genes chr3L_6_22670001 chr3L_22670001 RAL-900_125b 2579 chr3L 18198931 18198931 chr3L 24821493 24821493 7 6622562 3.5 29.0 16.2 0.4 6622562 chr3L 18198931 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821493 intergenic not near genes chr3L_7_21510001 chr3L_21510001 RAL-900_125b 2580 chr3L 20525227 20525229 chr3L 24821494 24821494 6 4296265 30.0 29.0 29.5 0.2 4296267 chr3L 20525227 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_6_22670001 chr3L_22670001 RAL-900_125b 2581 chr3L 25106542 25106591 chr3L 25106679 25106728 11 136 25.5 25.5 25.5 0.4 186 chr3L 25106542 intergenic not near genes chr3L 25106635 intergenic not near genes chr3L 25106728 intergenic not near genes chr3L_11_25105001 chr3L_25105001 RAL-900_125b 2582 chr3L 25268513 25268576 chr3L 25268644 25268707 18 131 17.0 14.5 15.8 1.1 194 chr3L 25268513 intron CG40467 - chr3L 25268610 intron CG40467 - chr3L 25268707 intron CG40467 - chr3L_18_25265001 chr3L_25265001 RAL-900_125b 2583 chr3L 25331601 25331642 chr3L 25331729 25331746 6 132 8.5 3.0 5.8 0.9 145 chr3L 25331601 intergenic not near genes chr3L 25331674 intergenic not near genes chr3L 25331746 intergenic not near genes chr3L_6_25330001 chr3L_25330001 RAL-900_125b 2584 chr3L 25420504 25420520 chr3L 25420771 25420787 7 267 14.5 15.5 15.0 0.4 283 chr3L 25420504 intergenic not near genes chr3L 25420646 intergenic not near genes chr3L 25420787 intergenic CG41087 - chr3L_7_25420001 chr3L_25420001 RAL-900_125b 2585 chr3L 25512789 25512802 chr3L 25512917 25512930 4 128 15.5 16.5 16.0 0.2 141 chr3L 25512789 intron CG41343 - chr3L 25512860 intron CG41343 - chr3L 25512930 intron CG41343 - chr3L_4_25510001 chr3L_25510001 RAL-900_125b 2586 chr3L 25513537 25513592 chr3L 25513666 25513721 12 129 14.0 11.0 12.5 0.9 184 chr3L 25513537 intron CG41343 - chr3L 25513629 intron CG41343 - chr3L 25513721 intron CG41343 - chr3L_12_25510001 chr3L_25510001 RAL-900_125b 2587 chr3L 25514669 25514896 chr3L 25514805 25515038 22 128 12.0 13.0 12.5 1.6 369 chr3L 25514669 intron CG41343 - chr3L 25514854 intron CG41343 - chr3L 25515038 intron CG41343 - chr3L_22_25510001 chr3L_25510001 RAL-900_125b 2588 chr3L 25628459 25628518 chr3L 25633280 25633339 F-element 6 4821 19.5 6.5 13.0 0.4 4880 chr3L 25628459 intron CG41343 - chr3L 25630899 intron CG41343 - chr3L 25633339 intron CG41343 - chr3L_6_25630001 chr3L_25630001 RAL-900_125b 2589 chr3L 25810210 25810212 chr3L 25825355 25825357 Tirant 4 15145 29.0 44.5 36.8 0.1 15147 chr3L 25810210 intron CG40178 - chr3L 25817784 intron CG40178 - chr3L 25825357 intron CG40178 - chr3L_4_25815001 chr3L_25815001 RAL-900_125b 2590 chr3L 25886882 25886889 chr3L 25887306 25887342 4 446 15.5 19.5 17.5 0.2 460 chr3L 25886882 intron CG40178 - chr3L 25887112 intron CG40178 - chr3L 25887342 intron CG40178 - chr3L_4_25885001 chr3L_25885001 RAL-900_125b 2591 chr3L 25952257 25952271 chr3L 25989358 25989372 6 37102 11.0 32.5 21.8 0.3 37115 chr3L 25952257 intron CG40178 - chr3L 25970814 intron CG40178 - chr3L 25989372 intron CG40178 - chr3L_6_25970001 chr3L_25970001 RAL-900_125b 2592 chr3L 26009377 26009421 chr3L 26009518 26009555 12 139 23.5 17.0 20.2 0.6 178 chr3L 26009377 intron CG40178 - chr3L 26009466 intron CG40178 - chr3L 26009555 intron CG40178 - chr3L_12_26005001 chr3L_26005001 RAL-900_125b 2593 chr3L 26694912 26694951 chr3L 26695042 26695080 8 127 10.5 13.0 11.8 0.6 168 chr3L 26694912 intergenic not near genes chr3L 26694996 intergenic not near genes chr3L 26695080 intergenic not near genes chr3L_8_26690001 chr3L_26690001 RAL-900_125b 2594 chr3L 26704483 26704528 chr3L 26709838 26709883 Transpac 8 5354 5.5 8.5 7.0 1.0 5400 chr3L 26704483 intergenic not near genes chr3L 26707183 intergenic not near genes chr3L 26709883 intergenic not near genes chr3L_8_26705001 chr3L_26705001 RAL-900_125b 2595 chr3L 26737955 26738008 chr3L 26738491 26738544 9 536 10.5 12.5 11.5 0.7 589 chr3L 26737955 intergenic not near genes chr3L 26738250 intergenic not near genes chr3L 26738544 intergenic not near genes chr3L_9_26735001 chr3L_26735001 RAL-900_125b 2596 chr3L 23941232 23941241 chr3L 26882297 26882300 1360 7 2941060 30.0 13.0 21.5 0.3 2941068 chr3L 23941232 intron CG40470 - chr3L 25411766 intergenic not near genes chr3L 26882300 intergenic not near genes chr3L_7_25410001 chr3L_25410001 RAL-900_125b 2597 chr3L 27167910 27167976 chr3L 27168080 27168140 22 167 26.0 20.0 23.0 0.9 230 chr3L 27167910 intergenic not near genes chr3L 27168025 intergenic not near genes chr3L 27168140 intergenic not near genes chr3L_22_27165001 chr3L_27165001 RAL-900_125b 2598 chr3L 27356066 27356104 chr3L 27357315 27357318 1360 15 1246 16.5 16.0 16.2 0.9 1252 chr3L 27356066 intron Dbp80 + chr3L 27356692 intron Dbp80 + chr3L 27357318 intron Dbp80 + chr3L_15_27355001 chr3L_27355001 RAL-900_125b 2599 chr3L 27368841 27368894 chr3L 27369436 27369490 15 595 30.0 30.0 30.0 0.5 649 chr3L 27368841 intron Dbp80 + chr3L 27369166 intron Dbp80 + chr3L 27369490 intron Dbp80 + chr3L_15_27365001 chr3L_27365001 RAL-900_125b 2600 chr3L 27390639 27390707 chr3L 27390768 27390836 13 127 39.0 48.0 43.5 0.3 197 chr3L 27390639 intron Dbp80 + chr3L 27390738 intron Dbp80 + chr3L 27390836 intron Dbp80 + chr3L_13_27390001 chr3L_27390001 RAL-900_125b 2601 chr3L 27727617 27727657 chr3L 27728763 27728814 G-element 4 1149 10.0 14.0 12.0 0.3 1197 chr3L 27727617 intergenic not near genes chr3L 27728216 intergenic not near genes chr3L 27728814 intergenic not near genes chr3L_4_27725001 chr3L_27725001 RAL-900_125b 2602 chr3L 27980649 27980700 chr3L 27985497 27985543 Doc 17 4848 24.5 8.0 16.2 1.0 4894 chr3L 27980649 intron CG17514 - chr3L 27983096 intron CG17514 - chr3L 27985543 intron CG17514 - chr3L_17_27980001 chr3L_27980001 RAL-900_125b 2603 chr3R 1021767 1021837 chr3R 1021972 1022041 16 204 34.5 39.0 36.8 0.4 274 chr3R 1021767 intergenic not near genes chr3R 1021904 intergenic not near genes chr3R 1022041 intergenic not near genes chr3R_16_1020001 chr3R_1020001 RAL-900_125b 2604 chr3R 1062340 1062407 chr3R 1062548 1062615 22 208 16.0 15.0 15.5 1.3 275 chr3R 1062340 intron CG15831 + chr3R 1062478 intron CG15831 + chr3R 1062615 intron CG15831 + chr3R_22_1060001 chr3R_1060001 RAL-900_125b 2605 chr3R 1939003 1939074 chr3R 1939147 1939217 10 144 13.0 10.5 11.8 0.8 214 chr3R 1939003 intergenic not near genes chr3R 1939110 intergenic not near genes chr3R 1939217 intergenic not near genes chr3R_10_1935001 chr3R_1935001 RAL-900_125b 2606 chr3R 2490893 2490929 chr3R 2491012 2491039 6 139 9.0 11.0 10.0 0.5 146 chr3R 2490893 intergenic not near genes chr3R 2490966 intergenic not near genes chr3R 2491039 intergenic not near genes chr3R_6_2490001 chr3R_2490001 RAL-900_125b 2607 chr3R 2534106 2534153 chr3R 2541713 2541772 11 7613 18.0 27.5 22.8 0.5 7666 chr3R 2534106 intergenic not near genes chr3R 2537939 intergenic not near genes chr3R 2541772 intergenic not near genes chr3R_11_2535001 chr3R_2535001 RAL-900_125b 2608 chr3R 2998423 2998492 chr3R 2998549 2998618 7 126 12.0 11.5 11.8 0.5 195 chr3R 2998423 intron CG42618 - chr3R 2998520 intron CG42618 - chr3R 2998618 intron CG42618 - chr3R_7_2995001 chr3R_2995001 RAL-900_125b 2609 chr3R 3267259 3267319 chr3R 3267390 3267450 8 132 40.5 42.5 41.5 0.2 191 chr3R 3267259 intergenic not near genes chr3R 3267354 intergenic not near genes chr3R 3267450 intergenic not near genes chr3R_8_3265001 chr3R_3265001 RAL-900_125b 2610 chr3R 2542259 2542267 chr3R 3713589 3713598 accord2 7 1171331 17.5 46.5 32.0 0.2 1171339 chr3R 2542259 intergenic not near genes chr3R 3127928 intergenic not near genes chr3R 3713598 intergenic not near genes chr3R_7_3125001 chr3R_3125001 RAL-900_125b 2611 chr3R 3752692 3752751 chr3R 3752825 3752884 16 131 22.5 19.5 21.0 0.7 192 chr3R 3752692 intergenic CG41128 + chr3R 3752788 intergenic CG41128 + chr3R 3752884 intergenic not near genes chr3R_16_3750001 chr3R_3750001 RAL-900_125b 2612 chr3R 4012457 4012511 chr3R 4012596 4012650 14 135 12.0 11.5 11.8 1.1 193 chr3R 4012457 intergenic not near genes chr3R 4012554 intergenic not near genes chr3R 4012650 intergenic not near genes chr3R_14_4010001 chr3R_4010001 RAL-900_125b 2613 chr3R 4063760 4063820 chr3R 4069090 4069100 9 5319 10.0 28.5 19.2 0.4 5340 chr3R 4063760 intergenic not near genes chr3R 4066430 intergenic not near genes chr3R 4069100 intergenic not near genes chr3R_9_4065001 chr3R_4065001 RAL-900_125b 2614 chr3R 4104999 4105055 chr3R 4110253 4110309 copia 16 5254 9.0 7.5 8.2 1.7 5310 chr3R 4104999 intergenic not near genes chr3R 4107654 intergenic not near genes chr3R 4110309 intergenic not near genes chr3R_16_4105001 chr3R_4105001 RAL-900_125b 2615 chr3R 4132852 4132928 chr3R 4133056 4133132 10 204 21.0 19.0 20.0 0.5 280 chr3R 4132852 intron Gfat1 + chr3R 4132992 intron Gfat1 + chr3R 4133132 intron Gfat1 + chr3R_10_4130001 chr3R_4130001 RAL-900_125b 2616 chr3R 4206026 4206094 chr3R 4211651 4211719 mdg3 29 5624 9.0 7.5 8.2 3.2 5693 chr3R 4206026 intron CG14636 - chr3R 4208872 intron CG14636 - chr3R 4211719 intron CG14636 - chr3R_29_4205001 chr3R_4205001 RAL-900_125b 2617 chr3R 4366714 4366784 chr3R 4375147 4375217 roo 44 8433 8.0 10.5 9.2 4.3 8503 chr3R 4366714 3` UTR CG1090 + chr3R 4370966 intergenic not near genes chr3R 4375217 5` UTR CR44922 + chr3R_44_4370001 chr3R_4370001 RAL-900_125b 2618 chr3R 4408373 4408432 chr3R 4412727 4412786 Juan 29 4354 12.5 9.5 11.0 2.4 4413 chr3R 4408373 intron CG32944 - chr3R 4410580 intron CG32944 - chr3R 4412786 intron CG32944 - chr3R_29_4410001 chr3R_4410001 RAL-900_125b 2619 chr3R 4474553 4474606 chr3R 4474868 4474920 10 315 19.0 21.5 20.2 0.5 367 chr3R 4474553 intron CG31523 - chr3R 4474736 intron CG31523 - chr3R 4474920 intron CG31523 - chr3R_10_4470001 chr3R_4470001 RAL-900_125b 2620 chr3R 4527540 4527610 chr3R 4528140 4528190 14 592 26.0 22.5 24.2 0.6 650 chr3R 4527540 intron CG34357 - chr3R 4527865 intron CG34357 - chr3R 4528190 intron CG34357 - chr3R_14_4525001 chr3R_4525001 RAL-900_125b 2621 chr3R 4609516 4609569 chr3R 4610730 4610775 1360 8 1210 23.5 25.0 24.2 0.3 1259 chr3R 4609516 intergenic not near genes chr3R 4610146 intergenic not near genes chr3R 4610775 intergenic not near genes chr3R_8_4610001 chr3R_4610001 RAL-900_125b 2622 chr3R 4635726 4635747 chr3R 4636089 4636110 9 363 48.0 44.5 46.2 0.2 384 chr3R 4635726 intergenic CR45673 + chr3R 4635918 intergenic CR45673 + chr3R 4636110 intergenic CR45673 + chr3R_9_4635001 chr3R_4635001 RAL-900_125b 2623 chr3R 4657233 4657269 chr3R 4657587 4657623 8 352 22.5 22.5 22.5 0.3 390 chr3R 4657233 intron spartin + chr3R 4657428 intron spartin + chr3R 4657623 exon spartin + chr3R_8_4655001 chr3R_4655001 RAL-900_125b 2624 chr3R 4659041 4659062 chr3R 4659228 4659249 BS 9 187 22.5 17.0 19.8 0.4 208 chr3R 4659041 intergenic not near genes chr3R 4659145 intergenic CG43427 + chr3R 4659249 intergenic CG43427 + chr3R_9_4655001 chr3R_4655001 RAL-900_125b 2625 chr3R 4680673 4680734 chr3R 4680802 4680863 13 129 35.5 37.5 36.5 0.3 190 chr3R 4680673 intron CG43427 + chr3R 4680768 intron CG43427 + chr3R 4680863 intron CG43427 + chr3R_13_4680001 chr3R_4680001 RAL-900_125b 2626 chr3R 4733635 4733690 chr3R 4733809 4733864 15 172 32.5 32.5 32.5 0.4 229 chr3R 4733635 intergenic not near genes chr3R 4733750 intergenic not near genes chr3R 4733864 intergenic not near genes chr3R_15_4730001 chr3R_4730001 RAL-900_125b 2627 chr3R 4753205 4753261 chr3R 4757551 4757614 F-element 28 4350 14.5 8.0 11.2 2.3 4409 chr3R 4753205 intron,intron atms +,CG44098 - chr3R 4755410 intron,intron atms +,CG44098 - chr3R 4757614 intron,exon atms +,CG44098 - chr3R_28_4755001 chr3R_4755001 RAL-900_125b 2628 chr3R 4769126 4769184 chr3R 4769249 4769312 8 127 20.5 24.0 22.2 0.3 186 chr3R 4769126 intron,intron atms +,CG44098 - chr3R 4769219 intron,intron atms +,CG44098 - chr3R 4769312 intron,intron atms +,CG44098 - chr3R_8_4765001 chr3R_4765001 RAL-900_125b 2629 chr3R 4770207 4770272 chr3R 4770341 4770406 20 134 22.5 22.0 22.2 0.9 199 chr3R 4770207 intron,intron atms +,CG44098 - chr3R 4770306 intron,intron atms +,CG44098 - chr3R 4770406 intron,intron atms +,CG44098 - chr3R_20_4770001 chr3R_4770001 RAL-900_125b 2630 chr3R 4796071 4796130 chr3R 4796244 4796303 14 170 30.5 28.0 29.2 0.5 232 chr3R 4796071 intron ctrip - chr3R 4796187 intron ctrip - chr3R 4796303 intron ctrip - chr3R_14_4795001 chr3R_4795001 RAL-900_125b 2631 chr3R 4861527 4861534 chr3R 4861648 4861665 5 127 22.5 8.5 15.5 0.3 138 chr3R 4861527 intron opa + chr3R 4861596 intron opa + chr3R 4861665 intron opa + chr3R_5_4860001 chr3R_4860001 RAL-900_125b 2632 chr3R 4861535 4861595 chr3R 4861647 4861655 20 117 6.0 8.5 7.2 2.4 120 chr3R 4861535 intron opa + chr3R 4861595 intron opa + chr3R 4861655 intron opa + chr3R_20_4860001 chr3R_4860001 RAL-900_125b 2633 chr3R 4887442 4887507 chr3R 4894868 4894934 rover 25 7421 3.5 11.5 7.5 2.9 7492 chr3R 4887442 intergenic not near genes chr3R 4891188 intergenic not near genes chr3R 4894934 intergenic not near genes chr3R_25_4890001 chr3R_4890001 RAL-900_125b 2634 chr3R 4922309 4922359 chr3R 4922438 4922488 6 129 21.5 22.5 22.0 0.3 179 chr3R 4922309 intron Cdep + chr3R 4922398 intron Cdep + chr3R 4922488 intron Cdep + chr3R_6_4920001 chr3R_4920001 RAL-900_125b 2635 chr3R 4943580 4943593 chr3R 4943735 4943748 5 155 18.5 9.5 14.0 0.3 168 chr3R 4943580 intron Cdep + chr3R 4943664 intron Cdep + chr3R 4943748 intron Cdep + chr3R_5_4940001 chr3R_4940001 RAL-900_125b 2636 chr3R 4943594 4943623 chr3R 4943729 4943748 18 149 12.5 9.0 10.8 1.5 154 chr3R 4943594 intron Cdep + chr3R 4943671 intron Cdep + chr3R 4943748 intron Cdep + chr3R_18_4940001 chr3R_4940001 RAL-900_125b 2637 chr3R 4948332 4948389 chr3R 4949004 4949061 24 672 40.5 35.0 37.8 0.6 729 chr3R 4948332 intergenic snRNA:U1:82Eb -,UbcD6 - chr3R 4948696 intergenic UbcD6 - chr3R 4949061 3` UTR UbcD6 - chr3R_24_4945001 chr3R_4945001 RAL-900_125b 2638 chr3R 4965969 4966027 chr3R 4966111 4966169 11 138 17.5 25.5 21.5 0.5 200 chr3R 4965969 intron CG1124 + chr3R 4966069 intron CG1124 + chr3R 4966169 intron CG1124 + chr3R_11_4965001 chr3R_4965001 RAL-900_125b 2639 chr3R 4981412 4981432 chr3R 4981488 4981546 5 110 9.5 9.5 9.5 0.5 134 chr3R 4981412 intergenic not near genes chr3R 4981479 intergenic not near genes chr3R 4981546 intergenic CG14662 - chr3R_5_4980001 chr3R_4980001 RAL-900_125b 2640 chr3R 4998355 4998377 chr3R 4998507 4998528 13 152 19.5 23.0 21.2 0.6 173 chr3R 4998355 intron CG2022 - chr3R 4998442 intron CG2022 - chr3R 4998528 intron CG2022 - chr3R_13_4995001 chr3R_4995001 RAL-900_125b 2641 chr3R 5000245 5000308 chr3R 5000402 5000465 22 157 23.0 20.5 21.8 1.0 220 chr3R 5000245 intron CG2022 - chr3R 5000355 intron CG2022 - chr3R 5000465 intron CG2022 - chr3R_22_5000001 chr3R_5000001 RAL-900_125b 2642 chr3R 5038706 5038773 chr3R 5038837 5038905 21 132 17.5 18.5 18.0 1.1 199 chr3R 5038706 intergenic not near genes chr3R 5038806 intergenic not near genes chr3R 5038905 intergenic not near genes chr3R_21_5035001 chr3R_5035001 RAL-900_125b 2643 chr3R 5045799 5045876 chr3R 5052951 5053028 HMS-Beagle 27 7152 7.5 10.0 8.8 2.8 7229 chr3R 5045799 3` UTR CR43635 - chr3R 5049414 intergenic not near genes chr3R 5053028 intergenic CR45588 - chr3R_27_5045001 chr3R_5045001 RAL-900_125b 2644 chr3R 5055317 5055382 chr3R 5055581 5055646 23 263 28.0 19.0 23.5 0.9 329 chr3R 5055317 intergenic not near genes chr3R 5055482 intergenic not near genes chr3R 5055646 intergenic not near genes chr3R_23_5055001 chr3R_5055001 RAL-900_125b 2645 chr3R 5067941 5068009 chr3R 5073508 5073548 mdg3 26 5566 5.5 12.5 9.0 2.6 5607 chr3R 5067941 intergenic not near genes chr3R 5070744 intergenic not near genes chr3R 5073548 intergenic not near genes chr3R_26_5070001 chr3R_5070001 RAL-900_125b 2646 chr3R 5105537 5105551 chr3R 5105632 5105658 7 98 18.0 5.5 11.8 0.5 121 chr3R 5105537 intergenic not near genes chr3R 5105598 intergenic not near genes chr3R 5105658 intergenic not near genes chr3R_7_5105001 chr3R_5105001 RAL-900_125b 2647 chr3R 5105553 5105579 chr3R 5105631 5105692 5 104 9.5 5.5 7.5 0.6 139 chr3R 5105553 intergenic not near genes chr3R 5105622 intergenic not near genes chr3R 5105692 intergenic not near genes chr3R_5_5105001 chr3R_5105001 RAL-900_125b 2648 chr3R 5236169 5236242 chr3R 5236347 5236420 35 178 8.0 9.0 8.5 3.7 251 chr3R 5236169 3` UTR,3` UTR Mms19 +,rtp - chr3R 5236294 3` UTR rtp - chr3R 5236420 exon rtp - chr3R_35_5235001 chr3R_5235001 RAL-900_125b 2649 chr3R 5250850 5250909 chr3R 5250996 5251069 20 158 20.5 21.0 20.8 0.9 219 chr3R 5250850 intron CG12163 - chr3R 5250960 intron CG12163 - chr3R 5251069 intron CG12163 - chr3R_20_5250001 chr3R_5250001 RAL-900_125b 2650 chr3R 5278046 5278054 chr3R 5278177 5278184 4 131 25.5 12.0 18.8 0.2 138 chr3R 5278046 intron mtd - chr3R 5278115 intron mtd - chr3R 5278184 intron mtd - chr3R_4_5275001 chr3R_5275001 RAL-900_125b 2651 chr3R 5278055 5278067 chr3R 5278174 5278198 6 127 22.5 12.5 17.5 0.3 143 chr3R 5278055 intron mtd - chr3R 5278126 intron mtd - chr3R 5278198 intron mtd - chr3R_6_5275001 chr3R_5275001 RAL-900_125b 2652 chr3R 5278072 5278109 chr3R 5278172 5278240 15 127 14.5 12.5 13.5 1.0 168 chr3R 5278072 intron mtd - chr3R 5278156 intron mtd - chr3R 5278240 intron mtd - chr3R_15_5275001 chr3R_5275001 RAL-900_125b 2653 chr3R 5280142 5280162 chr3R 5280270 5280290 9 128 15.5 9.0 12.2 0.7 148 chr3R 5280142 intron mtd - chr3R 5280216 intron mtd - chr3R 5280290 intron mtd - chr3R_9_5280001 chr3R_5280001 RAL-900_125b 2654 chr3R 5282946 5282989 chr3R 5283075 5283103 12 124 12.5 11.5 12.0 0.9 157 chr3R 5282946 intron mtd - chr3R 5283024 intron mtd - chr3R 5283103 intron mtd - chr3R_12_5280001 chr3R_5280001 RAL-900_125b 2655 chr3R 5338359 5338415 chr3R 5343586 5343642 Rt1c 11 5226 11.0 8.5 9.8 1.0 5283 chr3R 5338359 intron mtd - chr3R 5341000 intron mtd - chr3R 5343642 intron mtd - chr3R_11_5340001 chr3R_5340001 RAL-900_125b 2656 chr3R 5367213 5367228 chr3R 5367670 5367687 4 458 28.0 12.0 20.0 0.2 474 chr3R 5367213 intron Cerk - chr3R 5367450 intron Cerk - chr3R 5367687 intron Cerk - chr3R_4_5365001 chr3R_5365001 RAL-900_125b 2657 chr3R 5367229 5367274 chr3R 5367662 5367733 6 453 23.5 11.0 17.2 0.3 504 chr3R 5367229 intron Cerk - chr3R 5367481 intron Cerk - chr3R 5367733 intron Cerk - chr3R_6_5365001 chr3R_5365001 RAL-900_125b 2658 chr3R 5385104 5385165 chr3R 5385334 5385395 13 229 24.5 25.5 25.0 0.5 291 chr3R 5385104 exon kkv - chr3R 5385250 intron kkv - chr3R 5385395 intron kkv - chr3R_13_5385001 chr3R_5385001 RAL-900_125b 2659 chr3R 5385926 5385995 chr3R 5386147 5386216 24 218 10.0 7.0 8.5 2.5 290 chr3R 5385926 intron kkv - chr3R 5386071 intron kkv - chr3R 5386216 intron kkv - chr3R_24_5385001 chr3R_5385001 RAL-900_125b 2660 chr3R 5445923 5445976 chr3R 5452433 5452486 Burdock 32 6510 12.0 9.5 10.8 2.7 6563 chr3R 5445923 intron CG14669 + chr3R 5449204 intron CG14669 + chr3R 5452486 intron CG14669 + chr3R_32_5445001 chr3R_5445001 RAL-900_125b 2661 chr3R 5502545 5502608 chr3R 5502674 5502736 4 124 19.5 23.5 21.5 0.2 191 chr3R 5502545 5` UTR CG31547 - chr3R 5502640 5` UTR CG31547 - chr3R 5502736 intergenic CG31547 - chr3R_4_5500001 chr3R_5500001 RAL-900_125b 2662 chr3R 5680744 5680804 chr3R 5680878 5680938 13 134 31.0 28.0 29.5 0.4 194 chr3R 5680744 3` UTR Rab23 - chr3R 5680841 3` UTR Rab23 - chr3R 5680938 3` UTR Rab23 - chr3R_13_5680001 chr3R_5680001 RAL-900_125b 2663 chr3R 5688742 5688810 chr3R 5688913 5688981 13 169 20.0 24.5 22.2 0.6 239 chr3R 5688742 intron plx + chr3R 5688862 intron plx + chr3R 5688981 intron plx + chr3R_13_5685001 chr3R_5685001 RAL-900_125b 2664 chr3R 5712042 5712107 chr3R 5712180 5712245 17 137 19.5 19.0 19.2 0.8 203 chr3R 5712042 3` UTR plx + chr3R 5712144 3` UTR plx + chr3R 5712245 3` UTR plx + chr3R_17_5710001 chr3R_5710001 RAL-900_125b 2665 chr3R 5745972 5746029 chr3R 5746263 5746320 pogo 26 291 8.0 12.0 10.0 2.4 348 chr3R 5745972 3` UTR Madm + chr3R 5746146 3` UTR Madm + chr3R 5746320 3` UTR Madm + chr3R_26_5745001 chr3R_5745001 RAL-900_125b 2666 chr3R 5746972 5747033 chr3R 5753213 5753274 diver 23 6241 19.0 14.5 16.8 1.3 6302 chr3R 5746972 intergenic Madm + chr3R 5750123 intergenic not near genes chr3R 5753274 intergenic CG2091 - chr3R_23_5750001 chr3R_5750001 RAL-900_125b 2667 chr3R 5765593 5765656 chr3R 5765727 5765789 8 134 18.0 17.5 17.8 0.4 196 chr3R 5765593 intron CG2082 - chr3R 5765691 intron CG2082 - chr3R 5765789 intron CG2082 - chr3R_8_5765001 chr3R_5765001 RAL-900_125b 2668 chr3R 5769187 5769255 chr3R 5769335 5769403 26 147 8.5 7.5 8.0 2.9 216 chr3R 5769187 intron CG2082 - chr3R 5769295 intron CG2082 - chr3R 5769403 intron CG2082 - chr3R_26_5765001 chr3R_5765001 RAL-900_125b 2669 chr3R 5772328 5772402 chr3R 5772536 5772610 22 208 18.0 23.0 20.5 1.0 282 chr3R 5772328 intron CG2082 - chr3R 5772469 intron CG2082 - chr3R 5772610 intron CG2082 - chr3R_22_5770001 chr3R_5770001 RAL-900_125b 2670 chr3R 5775873 5775944 chr3R 5776571 5776632 17 694 22.5 12.5 17.5 0.9 759 chr3R 5775873 intron CG2082 - chr3R 5776252 intron CG2082 - chr3R 5776632 intron CG2082 - chr3R_17_5775001 chr3R_5775001 RAL-900_125b 2671 chr3R 5809069 5809138 chr3R 5809360 5809429 pogo 36 295 8.5 7.0 7.8 4.1 360 chr3R 5809069 3` UTR CG11000 + chr3R 5809249 3` UTR CG11000 + chr3R 5809429 3` UTR CG11000 + chr3R_36_5805001 chr3R_5805001 RAL-900_125b 2672 chr3R 5822346 5822365 chr3R 5823563 5823582 1360 14 1217 14.5 12.0 13.2 1.0 1236 chr3R 5822346 3` UTR CG2023 - chr3R 5822964 3` UTR CG2023 - chr3R 5823582 3` UTR CG2023 - chr3R_14_5820001 chr3R_5820001 RAL-900_125b 2673 chr3R 5822366 5822393 chr3R 5823558 5823610 1360 10 1214 10.5 10.0 10.2 0.9 1244 chr3R 5822366 3` UTR CG2023 - chr3R 5822988 3` UTR CG2023 - chr3R 5823610 3` UTR CG2023 - chr3R_10_5820001 chr3R_5820001 RAL-900_125b 2674 chr3R 5822394 5822400 chr3R 5823611 5823617 1360 4 1217 7.0 26.0 16.5 0.2 1223 chr3R 5822394 3` UTR CG2023 - chr3R 5823006 3` UTR CG2023 - chr3R 5823617 3` UTR CG2023 - chr3R_4_5820001 chr3R_5820001 RAL-900_125b 2675 chr3R 5836165 5836176 chr3R 5836319 5836330 6 154 20.5 24.0 22.2 0.3 165 chr3R 5836165 exon,3` UTR CG1208 +,CR45192 - chr3R 5836248 intron CG1208 + chr3R 5836330 intron CG1208 + chr3R_6_5835001 chr3R_5835001 RAL-900_125b 2676 chr3R 5927525 5927551 chr3R 5927802 5927841 pogo 12 289 12.0 7.5 9.8 1.1 316 chr3R 5927525 intron CG34113 - chr3R 5927683 intron CG34113 - chr3R 5927841 intron CG34113 - chr3R_12_5925001 chr3R_5925001 RAL-900_125b 2677 chr3R 5927556 5927579 chr3R 5927801 5927867 pogo 9 283 8.0 7.5 7.8 1.0 311 chr3R 5927556 intron CG34113 - chr3R 5927712 intron CG34113 - chr3R 5927867 intron CG34113 - chr3R_9_5925001 chr3R_5925001 RAL-900_125b 2678 chr3R 5931420 5931443 chr3R 5931558 5931581 5 135 23.0 17.5 20.2 0.2 161 chr3R 5931420 intron CG34113 - chr3R 5931500 intron CG34113 - chr3R 5931581 intron CG34113 - chr3R_5_5930001 chr3R_5930001 RAL-900_125b 2679 chr3R 5931812 5931832 chr3R 5931932 5931958 14 125 28.5 21.5 25.0 0.5 146 chr3R 5931812 intron CG34113 - chr3R 5931885 intron CG34113 - chr3R 5931958 intron CG34113 - chr3R_14_5930001 chr3R_5930001 RAL-900_125b 2680 chr3R 5967639 5967665 chr3R 5967803 5967821 5 160 15.5 11.5 13.5 0.3 182 chr3R 5967639 intergenic not near genes chr3R 5967730 intergenic not near genes chr3R 5967821 intergenic not near genes chr3R_5_5965001 chr3R_5965001 RAL-900_125b 2681 chr3R 5967668 5967670 chr3R 5967802 5967834 4 147 15.0 11.5 13.2 0.3 166 chr3R 5967668 intergenic not near genes chr3R 5967751 intergenic not near genes chr3R 5967834 intergenic not near genes chr3R_4_5965001 chr3R_5965001 RAL-900_125b 2682 chr3R 5968129 5968199 chr3R 5968259 5968329 19 127 24.5 20.5 22.5 0.8 200 chr3R 5968129 intergenic not near genes chr3R 5968229 intergenic not near genes chr3R 5968329 intergenic not near genes chr3R_19_5965001 chr3R_5965001 RAL-900_125b 2683 chr3R 5989289 5989360 chr3R 5989422 5989488 14 130 12.0 11.0 11.5 1.1 199 chr3R 5989289 5` UTR CR44927 + chr3R 5989388 5` UTR CR44927 + chr3R 5989488 5` UTR CR44927 + chr3R_14_5985001 chr3R_5985001 RAL-900_125b 2684 chr3R 6015565 6015577 chr3R 6015692 6015704 11 128 1.0 23.5 12.2 0.8 139 chr3R 6015565 intergenic not near genes chr3R 6015634 intergenic not near genes chr3R 6015704 intergenic not near genes chr3R_11_6015001 chr3R_6015001 RAL-900_125b 2685 chr3R 6015950 6015995 chr3R 6024444 6024544 Tirant 11 8529 4.0 3.5 3.8 2.3 8594 chr3R 6015950 intergenic not near genes chr3R 6020247 intergenic not near genes chr3R 6024544 intergenic not near genes chr3R_11_6020001 chr3R_6020001 RAL-900_125b 2686 chr3R 6051832 6051905 chr3R 6051963 6052036 16 129 21.5 20.5 21.0 0.7 204 chr3R 6051832 intergenic not near genes chr3R 6051934 intergenic not near genes chr3R 6052036 intergenic not near genes chr3R_16_6050001 chr3R_6050001 RAL-900_125b 2687 chr3R 6119112 6119154 chr3R 6119248 6119290 10 136 20.0 24.0 22.0 0.4 178 chr3R 6119112 intergenic not near genes chr3R 6119201 intergenic not near genes chr3R 6119290 intergenic not near genes chr3R_10_6115001 chr3R_6115001 RAL-900_125b 2688 chr3R 6121134 6121178 chr3R 6121369 6121446 BS 19 251 1.0 5.5 3.2 4.5 312 chr3R 6121134 intergenic not near genes chr3R 6121290 intergenic not near genes chr3R 6121446 intergenic not near genes chr3R_19_6120001 chr3R_6120001 RAL-900_125b 2689 chr3R 6124183 6124248 chr3R 6124317 6124382 12 134 25.5 27.5 26.5 0.4 199 chr3R 6124183 3` UTR Vha14-2 + chr3R 6124282 3` UTR Vha14-2 + chr3R 6124382 3` UTR Vha14-2 + chr3R_12_6120001 chr3R_6120001 RAL-900_125b 2690 chr3R 6158472 6158535 chr3R 6167100 6167118 Tirant 19 8627 8.0 8.0 8.0 2.1 8646 chr3R 6158472 intergenic not near genes chr3R 6162795 intergenic not near genes chr3R 6167118 intergenic CG1077 + chr3R_19_6160001 chr3R_6160001 RAL-900_125b 2691 chr3R 6170547 6170569 chr3R 6170678 6170700 7 131 21.0 21.0 21.0 0.3 153 chr3R 6170547 intergenic CG1077 + chr3R 6170624 intergenic CG1077 + chr3R 6170700 intergenic CG1077 + chr3R_7_6170001 chr3R_6170001 RAL-900_125b 2692 chr3R 6171110 6171174 chr3R 6171522 6171586 23 412 26.5 24.5 25.5 0.9 476 chr3R 6171110 intergenic not near genes chr3R 6171348 intergenic not near genes chr3R 6171586 intergenic not near genes chr3R_23_6170001 chr3R_6170001 RAL-900_125b 2693 chr3R 6175133 6175196 chr3R 6182455 6182508 HMS-Beagle2 31 7320 9.0 8.5 8.8 3.2 7375 chr3R 6175133 intergenic Osi1 + chr3R 6178820 intron CR45194 + chr3R 6182508 intergenic CR45194 + chr3R_31_6175001 chr3R_6175001 RAL-900_125b 2694 chr3R 6187741 6187816 chr3R 6195468 6195543 13 7727 45.5 50.5 48.0 0.3 7802 chr3R 6187741 intron NPFR + chr3R 6191642 intron NPFR + chr3R 6195543 intergenic NPFR + chr3R_13_6190001 chr3R_6190001 RAL-900_125b 2695 chr3R 6206246 6206306 chr3R 6206513 6206563 BS 16 266 22.5 10.5 16.5 0.9 317 chr3R 6206246 exon Osi24 + chr3R 6206404 intron Osi24 + chr3R 6206563 intron Osi24 + chr3R_16_6205001 chr3R_6205001 RAL-900_125b 2696 chr3R 6222270 6222330 chr3R 6222401 6222461 13 131 26.0 24.0 25.0 0.5 191 chr3R 6222270 intergenic Osi4 - chr3R 6222366 intergenic not near genes chr3R 6222461 intergenic not near genes chr3R_13_6220001 chr3R_6220001 RAL-900_125b 2697 chr3R 6283264 6283329 chr3R 6283401 6283466 16 137 22.5 23.0 22.8 0.7 202 chr3R 6283264 intergenic not near genes chr3R 6283365 intergenic not near genes chr3R 6283466 intergenic not near genes chr3R_16_6280001 chr3R_6280001 RAL-900_125b 2698 chr3R 6310593 6310663 chr3R 6310881 6310951 21 284 19.0 23.5 21.2 0.9 358 chr3R 6310593 exon CG31560 + chr3R 6310772 exon CG31560 + chr3R 6310951 intergenic CG31560 + chr3R_21_6310001 chr3R_6310001 RAL-900_125b 2699 chr3R 6316728 6316796 chr3R 6316871 6316938 20 142 22.0 18.5 20.2 0.9 210 chr3R 6316728 intron Osi17 + chr3R 6316833 intron Osi17 + chr3R 6316938 intron Osi17 + chr3R_20_6315001 chr3R_6315001 RAL-900_125b 2700 chr3R 6428773 6428836 chr3R 6428915 6428988 16 151 7.0 9.0 8.0 1.8 215 chr3R 6428773 intron gpp + chr3R 6428880 intron gpp + chr3R 6428988 intron gpp + chr3R_16_6425001 chr3R_6425001 RAL-900_125b 2701 chr3R 6461546 6461598 chr3R 6461676 6461728 13 130 28.5 28.0 28.2 0.4 182 chr3R 6461546 intergenic not near genes chr3R 6461637 intergenic not near genes chr3R 6461728 intergenic not near genes chr3R_13_6460001 chr3R_6460001 RAL-900_125b 2702 chr3R 6509982 6510045 chr3R 6515113 6515176 jockey 34 5131 9.5 11.0 10.2 3.0 5194 chr3R 6509982 intergenic not near genes chr3R 6512579 intergenic not near genes chr3R 6515176 intergenic not near genes chr3R_34_6510001 chr3R_6510001 RAL-900_125b 2703 chr3R 6523273 6523337 chr3R 6523699 6523763 14 425 21.5 21.0 21.2 0.6 490 chr3R 6523273 intergenic not near genes chr3R 6523518 intergenic not near genes chr3R 6523763 intergenic not near genes chr3R_14_6520001 chr3R_6520001 RAL-900_125b 2704 chr3R 6526818 6526868 chr3R 6526971 6527021 13 153 16.0 19.0 17.5 0.7 203 chr3R 6526818 intergenic not near genes chr3R 6526920 intergenic not near genes chr3R 6527021 intergenic CG15185 + chr3R_13_6525001 chr3R_6525001 RAL-900_125b 2705 chr3R 6530090 6530106 chr3R 6530228 6530244 5 138 24.5 25.0 24.8 0.2 154 chr3R 6530090 3` UTR dpr11 - chr3R 6530167 3` UTR dpr11 - chr3R 6530244 3` UTR dpr11 - chr3R_5_6530001 chr3R_6530001 RAL-900_125b 2706 chr3R 6552977 6553051 chr3R 6553105 6553133 12 117 22.0 20.5 21.2 0.5 156 chr3R 6552977 intron dpr11 - chr3R 6553055 intron dpr11 - chr3R 6553133 intron dpr11 - chr3R_12_6550001 chr3R_6550001 RAL-900_125b 2707 chr3R 6560721 6560780 chr3R 6560903 6560962 9 182 26.0 27.0 26.5 0.3 241 chr3R 6560721 intron dpr11 - chr3R 6560842 intron dpr11 - chr3R 6560962 intron dpr11 - chr3R_9_6560001 chr3R_6560001 RAL-900_125b 2708 chr3R 6616820 6616892 chr3R 6616942 6617019 18 127 27.5 26.0 26.8 0.6 199 chr3R 6616820 intergenic not near genes chr3R 6616920 intergenic not near genes chr3R 6617019 intergenic not near genes chr3R_18_6615001 chr3R_6615001 RAL-900_125b 2709 chr3R 6639887 6639925 chr3R 6640005 6640057 4 128 21.5 20.5 21.0 0.2 170 chr3R 6639887 intergenic not near genes chr3R 6639972 intergenic not near genes chr3R 6640057 intergenic not near genes chr3R_4_6635001 chr3R_6635001 RAL-900_125b 2710 chr3R 6697268 6697312 chr3R 6697404 6697448 9 136 31.0 24.0 27.5 0.3 180 chr3R 6697268 intergenic not near genes chr3R 6697358 intergenic not near genes chr3R 6697448 intergenic not near genes chr3R_9_6695001 chr3R_6695001 RAL-900_125b 2711 chr3R 6705668 6705703 chr3R 6705942 6705977 9 274 23.0 32.5 27.8 0.3 309 chr3R 6705668 intergenic not near genes chr3R 6705822 intergenic not near genes chr3R 6705977 intergenic not near genes chr3R_9_6705001 chr3R_6705001 RAL-900_125b 2712 chr3R 6717701 6717707 chr3R 6717827 6717894 5 175 6.5 14.0 10.2 0.4 193 chr3R 6717701 intron pb - chr3R 6717798 intron pb - chr3R 6717894 intron pb - chr3R_5_6715001 chr3R_6715001 RAL-900_125b 2713 chr3R 6737454 6737516 chr3R 6739291 6739353 Doc 27 1832 5.0 7.5 6.2 3.8 1899 chr3R 6737454 intron pb - chr3R 6738404 intron pb - chr3R 6739353 intron pb - chr3R_27_6735001 chr3R_6735001 RAL-900_125b 2714 chr3R 6773511 6773577 chr3R 6773646 6773714 17 134 7.5 7.5 7.5 2.0 203 chr3R 6773511 intron CR42721 + chr3R 6773612 intron CR42721 + chr3R 6773714 intron CR42721 + chr3R_17_6770001 chr3R_6770001 RAL-900_125b 2715 chr3R 6780405 6780483 chr3R 6780538 6780616 26 133 10.5 9.0 9.8 2.4 211 chr3R 6780405 intergenic not near genes chr3R 6780510 intergenic not near genes chr3R 6780616 intergenic not near genes chr3R_26_6780001 chr3R_6780001 RAL-900_125b 2716 chr3R 6782397 6782463 chr3R 6782526 6782592 29 127 9.5 13.5 11.5 2.3 195 chr3R 6782397 intergenic not near genes chr3R 6782494 intergenic not near genes chr3R 6782592 intergenic not near genes chr3R_29_6780001 chr3R_6780001 RAL-900_125b 2717 chr3R 6803699 6803750 chr3R 6803834 6803876 16 130 3.0 9.0 6.0 2.3 177 chr3R 6803699 intergenic not near genes chr3R 6803788 intergenic not near genes chr3R 6803876 intergenic not near genes chr3R_16_6800001 chr3R_6800001 RAL-900_125b 2718 chr3R 6807218 6807285 chr3R 6807350 6807417 34 132 9.0 7.5 8.2 3.7 199 chr3R 6807218 intergenic not near genes chr3R 6807318 intergenic not near genes chr3R 6807417 intergenic not near genes chr3R_34_6805001 chr3R_6805001 RAL-900_125b 2719 chr3R 6827977 6828039 chr3R 6828103 6828165 34 126 5.5 5.5 5.5 5.2 188 chr3R 6827977 intron Scr - chr3R 6828071 intron Scr - chr3R 6828165 intron Scr - chr3R_34_6825001 chr3R_6825001 RAL-900_125b 2720 chr3R 6856335 6856400 chr3R 6856502 6856567 29 167 9.5 6.5 8.0 3.2 232 chr3R 6856335 intergenic not near genes chr3R 6856451 intergenic not near genes chr3R 6856567 intergenic not near genes chr3R_29_6855001 chr3R_6855001 RAL-900_125b 2721 chr3R 6862174 6862239 chr3R 6862311 6862376 23 137 8.0 6.0 7.0 2.9 202 chr3R 6862174 intergenic not near genes chr3R 6862275 intergenic not near genes chr3R 6862376 intergenic not near genes chr3R_23_6860001 chr3R_6860001 RAL-900_125b 2722 chr3R 6891256 6891268 chr3R 6891313 6891394 4 109 5.5 9.0 7.2 0.5 138 chr3R 6891256 intergenic not near genes chr3R 6891325 intergenic not near genes chr3R 6891394 intergenic not near genes chr3R_4_6890001 chr3R_6890001 RAL-900_125b 2723 chr3R 6900711 6900724 chr3R 6900838 6900851 4 127 21.5 24.0 22.8 0.2 140 chr3R 6900711 intron Antp - chr3R 6900781 intron Antp - chr3R 6900851 intron Antp - chr3R_4_6900001 chr3R_6900001 RAL-900_125b 2724 chr3R 6912052 6912134 chr3R 6912213 6912295 19 161 5.0 2.5 3.8 4.0 243 chr3R 6912052 intron Antp - chr3R 6912174 intron Antp - chr3R 6912295 intron Antp - chr3R_19_6910001 chr3R_6910001 RAL-900_125b 2725 chr3R 6923542 6923617 chr3R 6923679 6923702 11 132 2.0 8.0 5.0 1.8 160 chr3R 6923542 intron Antp - chr3R 6923622 intron Antp - chr3R 6923702 intron Antp - chr3R_11_6920001 chr3R_6920001 RAL-900_125b 2726 chr3R 6978838 6978911 chr3R 6978973 6979046 37 135 3.5 4.5 4.0 7.4 208 chr3R 6978838 intron Antp - chr3R 6978942 intron Antp - chr3R 6979046 intron Antp - chr3R_37_6975001 chr3R_6975001 RAL-900_125b 2727 chr3R 7015945 7015964 chr3R 7016072 7016091 4 124 6.5 0.5 3.5 0.9 146 chr3R 7015945 intergenic not near genes chr3R 7016018 intergenic not near genes chr3R 7016091 intergenic not near genes chr3R_4_7015001 chr3R_7015001 RAL-900_125b 2728 chr3R 7015968 7015981 chr3R 7016070 7016074 6 104 3.5 0.5 2.0 2.0 106 chr3R 7015968 intergenic not near genes chr3R 7016021 intergenic not near genes chr3R 7016074 intergenic not near genes chr3R_6_7015001 chr3R_7015001 RAL-900_125b 2729 chr3R 7092750 7092815 chr3R 7093364 7093424 19 612 9.0 8.5 8.8 1.9 674 chr3R 7092750 3` UTR CR43685 - chr3R 7093087 intron CR43685 - chr3R 7093424 3` UTR CR43685 - chr3R_19_7090001 chr3R_7090001 RAL-900_125b 2730 chr3R 7103234 7103297 chr3R 7103360 7103423 10 118 8.0 9.0 8.5 1.1 189 chr3R 7103234 intron Alh - chr3R 7103328 intron Alh - chr3R 7103423 intron Alh - chr3R_10_7100001 chr3R_7100001 RAL-900_125b 2731 chr3R 7105277 7105345 chr3R 7105410 7105420 20 130 24.5 20.5 22.5 0.9 143 chr3R 7105277 intron Alh - chr3R 7105348 intron Alh - chr3R 7105420 intron Alh - chr3R_20_7105001 chr3R_7105001 RAL-900_125b 2732 chr3R 7121689 7121730 chr3R 7121822 7121863 17 132 14.0 12.0 13.0 1.2 174 chr3R 7121689 exon Alh - chr3R 7121776 intron Alh - chr3R 7121863 intron Alh - chr3R_17_7120001 chr3R_7120001 RAL-900_125b 2733 chr3R 7126472 7126525 chr3R 7126617 7126670 22 144 9.0 11.5 10.2 2.0 198 chr3R 7126472 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126571 3` UTR CG10068 - chr3R 7126670 3` UTR CG10068 - chr3R_22_7125001 chr3R_7125001 RAL-900_125b 2734 chr3R 7132800 7132869 chr3R 7132941 7133010 15 141 21.0 19.5 20.2 0.7 210 chr3R 7132800 intergenic CG31493 + chr3R 7132905 intergenic CG31493 + chr3R 7133010 intergenic CG31493 + chr3R_15_7130001 chr3R_7130001 RAL-900_125b 2735 chr3R 7147053 7147104 chr3R 7147216 7147260 5 162 27.0 30.0 28.5 0.2 207 chr3R 7147053 intron,exon CG2656 +,gfzf - chr3R 7147156 intron,intron CG2656 +,gfzf - chr3R 7147260 intron,intron CG2656 +,gfzf - chr3R_5_7145001 chr3R_7145001 RAL-900_125b 2736 chr3R 7173635 7173710 chr3R 7173765 7173836 38 130 14.5 12.5 13.5 2.6 201 chr3R 7173635 intron sas + chr3R 7173736 intron sas + chr3R 7173836 intron sas + chr3R_38_7170001 chr3R_7170001 RAL-900_125b 2737 chr3R 7210544 7210575 chr3R 7210671 7210702 8 127 28.5 29.5 29.0 0.3 158 chr3R 7210544 intergenic not near genes chr3R 7210623 intergenic not near genes chr3R 7210702 intergenic not near genes chr3R_8_7210001 chr3R_7210001 RAL-900_125b 2738 chr3R 7217417 7217475 chr3R 7217688 7217746 20 271 29.5 23.0 26.2 0.7 329 chr3R 7217417 intergenic CG14605 -,CG14606 - chr3R 7217582 intergenic CG14605 -,CG14606 - chr3R 7217746 exon CG14605 - chr3R_20_7215001 chr3R_7215001 RAL-900_125b 2739 chr3R 7269871 7269908 chr3R 7270015 7270052 13 144 14.5 16.5 15.5 0.8 181 chr3R 7269871 3` UTR Syt4 + chr3R 7269962 3` UTR Syt4 + chr3R 7270052 3` UTR Syt4 + chr3R_13_7265001 chr3R_7265001 RAL-900_125b 2740 chr3R 7302246 7302326 chr3R 7302388 7302468 13 137 18.5 19.0 18.8 0.7 222 chr3R 7302246 intron rn - chr3R 7302357 intron rn - chr3R 7302468 intron rn - chr3R_13_7300001 chr3R_7300001 RAL-900_125b 2741 chr3R 7404945 7404970 chr3R 7405071 7405096 11 126 3.5 13.5 8.5 1.2 151 chr3R 7404945 intergenic not near genes chr3R 7405020 intergenic not near genes chr3R 7405096 intergenic not near genes chr3R_11_7405001 chr3R_7405001 RAL-900_125b 2742 chr3R 7447947 7448006 chr3R 7448075 7448134 15 128 23.0 21.0 22.0 0.7 187 chr3R 7447947 intergenic not near genes chr3R 7448040 intergenic not near genes chr3R 7448134 intergenic not near genes chr3R_15_7445001 chr3R_7445001 RAL-900_125b 2743 chr3R 7481786 7481860 chr3R 7481914 7481988 15 126 24.0 20.5 22.2 0.6 202 chr3R 7481786 intergenic not near genes chr3R 7481887 intergenic not near genes chr3R 7481988 intergenic not near genes chr3R_15_7480001 chr3R_7480001 RAL-900_125b 2744 chr3R 7497871 7497914 chr3R 7498014 7498057 11 143 27.5 27.5 27.5 0.4 186 chr3R 7497871 intron alpha-Est9 - chr3R 7497964 intron alpha-Est9 - chr3R 7498057 intron alpha-Est9 - chr3R_11_7495001 chr3R_7495001 RAL-900_125b 2745 chr3R 7542427 7542452 chr3R 7542554 7542579 5 127 17.5 11.0 14.2 0.3 152 chr3R 7542427 intron alpha-Est2 + chr3R 7542503 intron alpha-Est2 + chr3R 7542579 intron alpha-Est2 + chr3R_5_7540001 chr3R_7540001 RAL-900_125b 2746 chr3R 7548561 7548631 chr3R 7548690 7548760 19 129 24.5 24.5 24.5 0.7 199 chr3R 7548561 intron alpha-Est1 - chr3R 7548660 intron alpha-Est1 - chr3R 7548760 intron alpha-Est1 - chr3R_19_7545001 chr3R_7545001 RAL-900_125b 2747 chr3R 7556903 7556959 chr3R 7557046 7557102 13 143 14.5 21.5 18.0 0.7 199 chr3R 7556903 intergenic not near genes chr3R 7557002 intergenic not near genes chr3R 7557102 intergenic not near genes chr3R_13_7555001 chr3R_7555001 RAL-900_125b 2748 chr3R 7574597 7574604 chr3R 7574729 7574736 5 131 19.5 19.5 19.5 0.2 139 chr3R 7574597 intron CG34127 - chr3R 7574666 intron CG34127 - chr3R 7574736 intron CG34127 - chr3R_5_7570001 chr3R_7570001 RAL-900_125b 2749 chr3R 7574608 7574615 chr3R 7574728 7574747 4 128 18.0 19.0 18.5 0.2 139 chr3R 7574608 intron CG34127 - chr3R 7574678 intron CG34127 - chr3R 7574747 intron CG34127 - chr3R_4_7570001 chr3R_7570001 RAL-900_125b 2750 chr3R 7574616 7574653 chr3R 7574727 7574780 6 125 18.0 19.0 18.5 0.3 164 chr3R 7574616 intron CG34127 - chr3R 7574698 intron CG34127 - chr3R 7574780 intron CG34127 - chr3R_6_7570001 chr3R_7570001 RAL-900_125b 2751 chr3R 7590277 7590347 chr3R 7590405 7590475 12 128 25.5 25.5 25.5 0.5 198 chr3R 7590277 intron CG34127 - chr3R 7590376 intron CG34127 - chr3R 7590475 intron CG34127 - chr3R_12_7590001 chr3R_7590001 RAL-900_125b 2752 chr3R 7617943 7618012 chr3R 7618085 7618154 11 139 21.0 19.5 20.2 0.5 211 chr3R 7617943 intron CG34127 - chr3R 7618048 intron CG34127 - chr3R 7618154 intron CG34127 - chr3R_11_7615001 chr3R_7615001 RAL-900_125b 2753 chr3R 7621489 7621557 chr3R 7621629 7621677 15 136 2.5 7.0 4.8 2.6 188 chr3R 7621489 intron CG34127 - chr3R 7621583 intron CG34127 - chr3R 7621677 intron CG34127 - chr3R_15_7620001 chr3R_7620001 RAL-900_125b 2754 chr3R 7635606 7635680 chr3R 7635739 7635813 29 132 8.5 9.0 8.8 3.0 207 chr3R 7635606 intron CG34127 - chr3R 7635710 intron CG34127 - chr3R 7635813 intron CG34127 - chr3R_29_7635001 chr3R_7635001 RAL-900_125b 2755 chr3R 7677866 7677943 chr3R 7678029 7678071 34 161 7.0 7.5 7.2 4.1 205 chr3R 7677866 intron Nlg1 + chr3R 7677968 intron Nlg1 + chr3R 7678071 intron Nlg1 + chr3R_34_7675001 chr3R_7675001 RAL-900_125b 2756 chr3R 7680377 7680434 chr3R 7680509 7680561 16 129 16.5 16.0 16.2 0.9 184 chr3R 7680377 intron Nlg1 + chr3R 7680469 intron Nlg1 + chr3R 7680561 intron Nlg1 + chr3R_16_7680001 chr3R_7680001 RAL-900_125b 2757 chr3R 7686788 7686834 chr3R 7686914 7686965 13 126 21.5 19.5 20.5 0.6 177 chr3R 7686788 intron Nlg1 + chr3R 7686876 intron Nlg1 + chr3R 7686965 intron Nlg1 + chr3R_13_7685001 chr3R_7685001 RAL-900_125b 2758 chr3R 7687751 7687812 chr3R 7687885 7687946 12 132 14.5 7.5 11.0 1.0 195 chr3R 7687751 intron Nlg1 + chr3R 7687848 intron Nlg1 + chr3R 7687946 intron Nlg1 + chr3R_12_7685001 chr3R_7685001 RAL-900_125b 2759 chr3R 7690006 7690056 chr3R 7690147 7690197 10 141 23.0 21.0 22.0 0.4 191 chr3R 7690006 intron Nlg1 + chr3R 7690102 intron Nlg1 + chr3R 7690197 intron Nlg1 + chr3R_10_7690001 chr3R_7690001 RAL-900_125b 2760 chr3R 7694537 7694610 chr3R 7713648 7713721 invader3 26 19111 6.5 10.5 8.5 2.7 19184 chr3R 7694537 3` UTR Nlg1 + chr3R 7704129 intergenic not near genes chr3R 7713721 intergenic not near genes chr3R_26_7700001 chr3R_7700001 RAL-900_125b 2761 chr3R 7729423 7729490 chr3R 7737411 7737478 Stalker2 30 7986 8.5 9.5 9.0 3.0 8055 chr3R 7729423 intergenic not near genes chr3R 7733450 intergenic not near genes chr3R 7737478 intergenic not near genes chr3R_30_7730001 chr3R_7730001 RAL-900_125b 2762 chr3R 7773344 7773344 chr3R 7890529 7890536 4 117188 40.0 31.5 35.8 0.1 117192 chr3R 7773344 intergenic not near genes chr3R 7831940 intron CG34384 + chr3R 7890536 intron mRpS9 - chr3R_4_7830001 chr3R_7830001 RAL-900_125b 2763 chr3R 7832706 7832738 chr3R 7832841 7832873 4 135 29.5 21.0 25.2 0.2 167 chr3R 7832706 intron CG34384 + chr3R 7832790 intron CG34384 + chr3R 7832873 intron CG34384 + chr3R_4_7830001 chr3R_7830001 RAL-900_125b 2764 chr3R 7849608 7849668 chr3R 7850825 7850880 1360 7 1216 21.5 22.5 22.0 0.3 1272 chr3R 7849608 intron CG34384 + chr3R 7850244 intron CG34384 + chr3R 7850880 intron CG34384 + chr3R_7_7850001 chr3R_7850001 RAL-900_125b 2765 chr3R 7857529 7857666 chr3R 7857666 7857799 27 135 11.0 8.5 9.8 2.5 270 chr3R 7857529 3` UTR CG17816 - chr3R 7857664 3` UTR CG17816 - chr3R 7857799 3` UTR CG17816 - chr3R_27_7855001 chr3R_7855001 RAL-900_125b 2766 chr3R 7883102 7883148 chr3R 7883230 7883276 8 127 29.0 27.5 28.2 0.3 174 chr3R 7883102 intron CG17816 - chr3R 7883189 intron CG17816 - chr3R 7883276 intron CG17816 - chr3R_8_7880001 chr3R_7880001 RAL-900_125b 2767 chr3R 7884622 7884691 chr3R 7884750 7884772 14 114 16.0 13.5 14.8 0.9 150 chr3R 7884622 intron CG17816 - chr3R 7884697 intron CG17816 - chr3R 7884772 intron CG17816 - chr3R_14_7880001 chr3R_7880001 RAL-900_125b 2768 chr3R 7973279 7973333 chr3R 7974391 7974445 1360 30 1112 16.0 9.0 12.5 2.2 1166 chr3R 7973279 intergenic not near genes chr3R 7973862 intergenic not near genes chr3R 7974445 3` UTR CD98hc - chr3R_30_7970001 chr3R_7970001 RAL-900_125b 2769 chr3R 8040619 8040679 chr3R 8040754 8040814 8 135 27.0 27.5 27.2 0.3 195 chr3R 8040619 intergenic not near genes chr3R 8040716 intergenic not near genes chr3R 8040814 intergenic CG43060 + chr3R_8_8040001 chr3R_8040001 RAL-900_125b 2770 chr3R 8081105 8081171 chr3R 8081233 8081278 14 117 28.0 25.5 26.8 0.5 173 chr3R 8081105 intron mAChR-B + chr3R 8081192 intron mAChR-B + chr3R 8081278 intron mAChR-B + chr3R_14_8080001 chr3R_8080001 RAL-900_125b 2771 chr3R 8090225 8090287 chr3R 8090452 8090514 10 226 31.5 26.0 28.8 0.3 289 chr3R 8090225 5` UTR CR44330 + chr3R 8090370 intergenic CR44330 + chr3R 8090514 intergenic CR44330 + chr3R_10_8090001 chr3R_8090001 RAL-900_125b 2772 chr3R 8090515 8090560 chr3R 8094042 8094072 297 15 3526 11.0 12.0 11.5 1.2 3557 chr3R 8090515 intergenic CR44330 + chr3R 8092294 intergenic not near genes chr3R 8094072 intergenic CG7900 + chr3R_15_8090001 chr3R_8090001 RAL-900_125b 2773 chr3R 8094363 8094428 chr3R 8099718 8099782 Transpac 23 5354 16.0 14.5 15.2 1.4 5419 chr3R 8094363 intron CG7900 + chr3R 8097072 intron CG7900 + chr3R 8099782 intron CG7900 + chr3R_23_8095001 chr3R_8095001 RAL-900_125b 2774 chr3R 8101718 8101785 chr3R 8104847 8104902 G2 18 3130 8.5 8.0 8.2 2.0 3184 chr3R 8101718 exon CG7900 + chr3R 8103310 intron CG7900 + chr3R 8104902 3` UTR CG7900 + chr3R_18_8100001 chr3R_8100001 RAL-900_125b 2775 chr3R 8126254 8126322 chr3R 8126389 8126457 13 135 20.5 22.5 21.5 0.6 203 chr3R 8126254 intron CG9667 - chr3R 8126356 5` UTR CG9667 - chr3R 8126457 intergenic CG9667 -,Gie + chr3R_13_8125001 chr3R_8125001 RAL-900_125b 2776 chr3R 8207515 8207588 chr3R 8208406 8208422 F-element 28 884 6.5 6.0 6.2 3.9 907 chr3R 8207515 intergenic not near genes chr3R 8207968 intergenic not near genes chr3R 8208422 intergenic not near genes chr3R_28_8205001 chr3R_8205001 RAL-900_125b 2777 chr3R 8212984 8213036 chr3R 8213096 8213169 9 122 22.0 23.0 22.5 0.4 185 chr3R 8212984 intergenic not near genes chr3R 8213076 intergenic not near genes chr3R 8213169 intergenic not near genes chr3R_9_8210001 chr3R_8210001 RAL-900_125b 2778 chr3R 8255473 8255534 chr3R 8255605 8255673 8 134 16.0 21.5 18.8 0.4 200 chr3R 8255473 intron mtg + chr3R 8255573 intron mtg + chr3R 8255673 intron mtg + chr3R_8_8255001 chr3R_8255001 RAL-900_125b 2779 chr3R 8273716 8273756 chr3R 8273853 8273893 8 137 22.5 23.5 23.0 0.3 177 chr3R 8273716 intergenic not near genes chr3R 8273804 intergenic not near genes chr3R 8273893 intergenic not near genes chr3R_8_8270001 chr3R_8270001 RAL-900_125b 2780 chr3R 8287385 8287385 chr3R 22081601 22081601 4 13794216 42.0 1.0 21.5 0.2 13794216 chr3R 8287385 intron CR44318 + chr3R 15184493 intron Gyc88E + chr3R 22081601 intron CG13408 + chr3R_4_15180001 chr3R_15180001 RAL-900_125b 2781 chr3R 8339246 8339247 chr3R 21907534 21907536 18 13568289 36.5 34.0 35.2 0.5 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_18_15120001 chr3R_15120001 RAL-900_125b 2782 chr3R 8358075 8358137 chr3R 8358369 8358431 6 294 23.0 30.0 26.5 0.2 356 chr3R 8358075 intron stck + chr3R 8358253 intron stck + chr3R 8358431 intron stck + chr3R_6_8355001 chr3R_8355001 RAL-900_125b 2783 chr3R 8374148 8374175 chr3R 8374287 8374315 4 150 23.5 20.5 22.0 0.2 167 chr3R 8374148 intron CG45263 - chr3R 8374232 intron CG45263 - chr3R 8374315 intron CG45263 - chr3R_4_8370001 chr3R_8370001 RAL-900_125b 2784 chr3R 8393529 8393599 chr3R 8393663 8393733 13 128 15.0 14.0 14.5 0.8 204 chr3R 8393529 intron CG45263 - chr3R 8393631 intron CG45263 - chr3R 8393733 intron CG45263 - chr3R_13_8390001 chr3R_8390001 RAL-900_125b 2785 chr3R 8402976 8403035 chr3R 8412177 8412245 roo 23 9211 7.0 6.0 6.5 3.1 9269 chr3R 8402976 intron CG45263 - chr3R 8407610 intron CG45263 - chr3R 8412245 intron CG45263 - chr3R_23_8405001 chr3R_8405001 RAL-900_125b 2786 chr3R 8460050 8460081 chr3R 8460183 8460218 7 134 14.5 13.5 14.0 0.5 168 chr3R 8460050 intron CG45263 - chr3R 8460134 intron CG45263 - chr3R 8460218 intron CG45263 - chr3R_7_8460001 chr3R_8460001 RAL-900_125b 2787 chr3R 8478037 8478098 chr3R 8478168 8478227 10 127 21.5 17.5 19.5 0.5 190 chr3R 8478037 intergenic CG45263 - chr3R 8478132 intergenic not near genes chr3R 8478227 intergenic not near genes chr3R_10_8475001 chr3R_8475001 RAL-900_125b 2788 chr3R 8491570 8491645 chr3R 8491699 8491774 12 126 20.5 19.5 20.0 0.6 204 chr3R 8491570 intergenic not near genes chr3R 8491672 intergenic not near genes chr3R 8491774 intergenic not near genes chr3R_12_8490001 chr3R_8490001 RAL-900_125b 2789 chr3R 8545120 8545181 chr3R 8545255 8545316 9 127 11.0 17.0 14.0 0.6 196 chr3R 8545120 intergenic not near genes chr3R 8545218 intergenic CR45575 + chr3R 8545316 intergenic CR45575 + chr3R_9_8545001 chr3R_8545001 RAL-900_125b 2790 chr3R 8549498 8549520 chr3R 8549626 8549648 5 126 19.5 6.5 13.0 0.4 150 chr3R 8549498 intergenic not near genes chr3R 8549573 intergenic not near genes chr3R 8549648 intergenic not near genes chr3R_5_8545001 chr3R_8545001 RAL-900_125b 2791 chr3R 8552332 8552379 chr3R 8552462 8552509 11 127 19.5 22.0 20.8 0.5 177 chr3R 8552332 intergenic Or85d + chr3R 8552420 intergenic Or85d + chr3R 8552509 intergenic Or85d + chr3R_11_8550001 chr3R_8550001 RAL-900_125b 2792 chr3R 8552381 8552396 chr3R 8552451 8552524 8 116 18.5 19.5 19.0 0.4 143 chr3R 8552381 intergenic Or85d + chr3R 8552452 intergenic Or85d + chr3R 8552524 intergenic Or85d + chr3R_8_8550001 chr3R_8550001 RAL-900_125b 2793 chr3R 8570440 8570500 chr3R 8575126 8575185 HMS-Beagle 19 4684 10.0 18.0 14.0 1.3 4745 chr3R 8570440 intergenic not near genes chr3R 8572812 intergenic not near genes chr3R 8575185 intergenic not near genes chr3R_19_8570001 chr3R_8570001 RAL-900_125b 2794 chr3R 8580400 8580472 chr3R 8580692 8580764 15 292 17.5 22.5 20.0 0.7 364 chr3R 8580400 intron 5-HT2B + chr3R 8580582 intron 5-HT2B + chr3R 8580764 intron 5-HT2B + chr3R_15_8580001 chr3R_8580001 RAL-900_125b 2795 chr3R 8601728 8601790 chr3R 8610931 8610971 roo 26 9200 5.0 8.0 6.5 3.5 9243 chr3R 8601728 intron 5-HT2B + chr3R 8606350 intron 5-HT2B + chr3R 8610971 intron 5-HT2B + chr3R_26_8605001 chr3R_8605001 RAL-900_125b 2796 chr3R 8612100 8612163 chr3R 8612239 8612270 12 136 29.5 28.5 29.0 0.4 170 chr3R 8612100 intron 5-HT2B + chr3R 8612185 intron 5-HT2B + chr3R 8612270 intron 5-HT2B + chr3R_12_8610001 chr3R_8610001 RAL-900_125b 2797 chr3R 8621502 8621509 chr3R 8621626 8621629 4 123 34.0 24.5 29.2 0.1 127 chr3R 8621502 intron 5-HT2B + chr3R 8621566 intron 5-HT2B + chr3R 8621629 intron 5-HT2B + chr3R_4_8620001 chr3R_8620001 RAL-900_125b 2798 chr3R 8630872 8630926 chr3R 8631016 8631076 13 153 10.0 10.0 10.0 1.2 204 chr3R 8630872 intergenic not near genes chr3R 8630974 intergenic not near genes chr3R 8631076 intergenic not near genes chr3R_13_8630001 chr3R_8630001 RAL-900_125b 2799 chr3R 8707317 8707325 chr3R 8709803 8709816 jockey 5 2487 17.5 7.0 12.2 0.4 2499 chr3R 8707317 intergenic not near genes chr3R 8708566 intergenic not near genes chr3R 8709816 intergenic not near genes chr3R_5_8705001 chr3R_8705001 RAL-900_125b 2800 chr3R 8707327 8707374 chr3R 8709802 8709865 jockey 21 2488 12.0 7.0 9.5 2.0 2538 chr3R 8707327 intergenic not near genes chr3R 8708596 intergenic not near genes chr3R 8709865 intergenic not near genes chr3R_21_8705001 chr3R_8705001 RAL-900_125b 2801 chr3R 8797474 8797538 chr3R 8801264 8801328 6 3786 34.0 51.0 42.5 0.1 3854 chr3R 8797474 exon,5` UTR Pif1A -,Pif1B - chr3R 8799401 intron,intron Pif1A -,Pif1B - chr3R 8801328 intergenic Pif1A -,Pif1B -,Tcp-1eta + chr3R_6_8795001 chr3R_8795001 RAL-900_125b 2802 chr3R 8798622 8798680 chr3R 8798740 8798813 13 132 21.0 25.5 23.2 0.5 191 chr3R 8798622 intron,intron Pif1A -,Pif1B - chr3R 8798718 intron,intron Pif1A -,Pif1B - chr3R 8798813 intron,intron Pif1A -,Pif1B - chr3R_13_8795001 chr3R_8795001 RAL-900_125b 2803 chr3R 8796628 8796690 chr3R 8801415 8801477 14 4790 49.0 52.5 50.8 0.3 4849 chr3R 8796628 intron,intron,exon Pif1A -,Pif1B -,Ir85a + chr3R 8799052 intron,intron Pif1A -,Pif1B - chr3R 8801477 intergenic Tcp-1eta +,Pif1A -,Pif1B - chr3R_14_8795001 chr3R_8795001 RAL-900_125b 2804 chr3R 8868773 8868786 chr3R 8872667 8872676 297 5 3893 12.5 11.5 12.0 0.4 3903 chr3R 8868773 intron pyd - chr3R 8870724 intron pyd - chr3R 8872676 intron pyd - chr3R_5_8870001 chr3R_8870001 RAL-900_125b 2805 chr3R 8882016 8882087 chr3R 8882157 8882228 11 140 30.0 31.0 30.5 0.3 212 chr3R 8882016 intron pyd - chr3R 8882122 intron pyd - chr3R 8882228 intron pyd - chr3R_11_8880001 chr3R_8880001 RAL-900_125b 2806 chr3R 8898182 8898213 chr3R 8913812 8913843 297 16 15629 23.0 8.5 15.8 1.0 15661 chr3R 8898182 intron pyd - chr3R 8906012 intron pyd - chr3R 8913843 intron pyd - chr3R_16_8905001 chr3R_8905001 RAL-900_125b 2807 chr3R 8917853 8917908 chr3R 8917983 8918030 20 129 21.5 21.5 21.5 0.9 177 chr3R 8917853 intron pyd - chr3R 8917942 intron pyd - chr3R 8918030 intron pyd - chr3R_20_8915001 chr3R_8915001 RAL-900_125b 2808 chr3R 8932837 8932899 chr3R 8933115 8933182 13 283 22.5 25.5 24.0 0.5 345 chr3R 8932837 intergenic not near genes chr3R 8933010 intergenic not near genes chr3R 8933182 intergenic not near genes chr3R_13_8930001 chr3R_8930001 RAL-900_125b 2809 chr3R 8997328 8997392 chr3R 8997468 8997532 12 140 25.0 32.0 28.5 0.4 204 chr3R 8997328 intron CG31100 - chr3R 8997430 intron CG31100 - chr3R 8997532 intron CG31100 - chr3R_12_8995001 chr3R_8995001 RAL-900_125b 2810 chr3R 9007931 9008004 chr3R 9008070 9008138 21 138 25.5 27.0 26.2 0.8 207 chr3R 9007931 3` UTR CG11982 + chr3R 9008034 intergenic CG11982 +,CG11983 + chr3R 9008138 intergenic CG11982 +,CG11983 + chr3R_21_9005001 chr3R_9005001 RAL-900_125b 2811 chr3R 9036669 9036741 chr3R 9036815 9036887 21 145 26.5 20.5 23.5 0.9 218 chr3R 9036669 intron neur - chr3R 9036778 intron neur - chr3R 9036887 intron neur - chr3R_21_9035001 chr3R_9035001 RAL-900_125b 2812 chr3R 9067392 9067464 chr3R 9067522 9067594 24 129 22.5 20.0 21.2 1.1 202 chr3R 9067392 3` UTR pum - chr3R 9067493 3` UTR pum - chr3R 9067594 3` UTR pum - chr3R_24_9065001 chr3R_9065001 RAL-900_125b 2813 chr3R 9082006 9082021 chr3R 9082150 9082165 4 142 26.0 25.0 25.5 0.2 159 chr3R 9082006 intron pum - chr3R 9082086 intron pum - chr3R 9082165 intron pum - chr3R_4_9080001 chr3R_9080001 RAL-900_125b 2814 chr3R 9082028 9082068 chr3R 9082145 9082212 12 142 19.5 23.5 21.5 0.5 184 chr3R 9082028 intron pum - chr3R 9082120 intron pum - chr3R 9082212 intron pum - chr3R_12_9080001 chr3R_9080001 RAL-900_125b 2815 chr3R 9083097 9083161 chr3R 9083232 9083257 7 125 26.5 20.5 23.5 0.3 160 chr3R 9083097 intron pum - chr3R 9083177 intron pum - chr3R 9083257 intron pum - chr3R_7_9080001 chr3R_9080001 RAL-900_125b 2816 chr3R 9099407 9099474 chr3R 9099541 9099607 7 134 20.0 17.0 18.5 0.4 200 chr3R 9099407 intron pum - chr3R 9099507 intron pum - chr3R 9099607 intron pum - chr3R_7_9095001 chr3R_9095001 RAL-900_125b 2817 chr3R 9101800 9101867 chr3R 9101948 9101984 29 146 5.0 12.0 8.5 3.1 184 chr3R 9101800 intron pum - chr3R 9101892 intron pum - chr3R 9101984 intron pum - chr3R_29_9100001 chr3R_9100001 RAL-900_125b 2818 chr3R 9108817 9108880 chr3R 9108943 9109006 37 126 9.0 7.0 8.0 4.1 189 chr3R 9108817 intron pum - chr3R 9108912 intron pum - chr3R 9109006 intron pum - chr3R_37_9105001 chr3R_9105001 RAL-900_125b 2819 chr3R 9146725 9146746 chr3R 9146859 9146880 7 132 36.5 28.0 32.2 0.2 155 chr3R 9146725 intron pum - chr3R 9146802 intron pum - chr3R 9146880 intron pum - chr3R_7_9145001 chr3R_9145001 RAL-900_125b 2820 chr3R 9146749 9146799 chr3R 9146858 9146888 10 125 27.0 28.0 27.5 0.4 139 chr3R 9146749 intron pum - chr3R 9146818 intron pum - chr3R 9146888 intron pum - chr3R_10_9145001 chr3R_9145001 RAL-900_125b 2821 chr3R 9149402 9149433 chr3R 9149532 9149563 7 130 27.5 17.0 22.2 0.3 161 chr3R 9149402 intron pum - chr3R 9149482 intron pum - chr3R 9149563 intron pum - chr3R_7_9145001 chr3R_9145001 RAL-900_125b 2822 chr3R 9166483 9166554 chr3R 9166870 9166942 14 387 25.5 30.5 28.0 0.5 459 chr3R 9166483 intron pum - chr3R 9166712 intron pum - chr3R 9166942 intron pum - chr3R_14_9165001 chr3R_9165001 RAL-900_125b 2823 chr3R 9170288 9170330 chr3R 9170793 9170835 6 505 26.5 24.0 25.2 0.2 547 chr3R 9170288 intron pum - chr3R 9170562 intron pum - chr3R 9170835 intron pum - chr3R_6_9170001 chr3R_9170001 RAL-900_125b 2824 chr3R 9170332 9170348 chr3R 9170787 9170853 5 493 27.0 22.5 24.8 0.2 521 chr3R 9170332 intron pum - chr3R 9170592 intron pum - chr3R 9170853 intron pum - chr3R_5_9170001 chr3R_9170001 RAL-900_125b 2825 chr3R 9192008 9192053 chr3R 9192143 9192188 16 132 6.0 5.5 5.8 2.4 180 chr3R 9192008 intron pum - chr3R 9192098 intron pum - chr3R 9192188 intron pum - chr3R_16_9190001 chr3R_9190001 RAL-900_125b 2826 chr3R 9204199 9204271 chr3R 9204336 9204403 19 135 29.5 27.0 28.2 0.7 204 chr3R 9204199 intron pum - chr3R 9204301 intron pum - chr3R 9204403 intron pum - chr3R_19_9200001 chr3R_9200001 RAL-900_125b 2827 chr3R 9251390 9251449 chr3R 9251520 9251579 15 130 22.0 21.0 21.5 0.7 189 chr3R 9251390 3` UTR CG8420 + chr3R 9251484 intergenic CG8420 +,St2 + chr3R 9251579 intergenic CG8420 +,St2 + chr3R_15_9250001 chr3R_9250001 RAL-900_125b 2828 chr3R 9278787 9278801 chr3R 9284097 9284106 Rt1a 5 5308 1.5 25.5 13.5 0.3 5319 chr3R 9278787 intergenic not near genes chr3R 9281446 intergenic not near genes chr3R 9284106 intergenic not near genes chr3R_5_9280001 chr3R_9280001 RAL-900_125b 2829 chr3R 9319535 9319599 chr3R 9320020 9320084 jockey 39 485 8.5 9.5 9.0 3.9 549 chr3R 9319535 intron CG8861 - chr3R 9319810 intron CG8861 - chr3R 9320084 intron CG8861 - chr3R_39_9315001 chr3R_9315001 RAL-900_125b 2830 chr3R 9361804 9361837 chr3R 9362095 9362128 pogo 16 291 12.5 24.5 18.5 0.8 324 chr3R 9361804 3` UTR CG45050 + chr3R 9361966 3` UTR CG45050 + chr3R 9362128 3` UTR CG45050 + chr3R_16_9360001 chr3R_9360001 RAL-900_125b 2831 chr3R 9362959 9363001 chr3R 9363097 9363140 10 139 21.5 29.5 25.5 0.4 181 chr3R 9362959 3` UTR CG45050 + chr3R 9363050 intergenic CG45050 +,CG18473 + chr3R 9363140 intergenic CG45050 +,CG18473 + chr3R_10_9360001 chr3R_9360001 RAL-900_125b 2832 chr3R 9364084 9364104 chr3R 9364689 9364709 6 604 20.5 22.0 21.2 0.3 625 chr3R 9364084 intron CG18473 + chr3R 9364396 exon CG18473 + chr3R 9364709 exon CG18473 + chr3R_6_9360001 chr3R_9360001 RAL-900_125b 2833 chr3R 9364107 9364154 chr3R 9364684 9364759 8 598 20.0 21.0 20.5 0.4 652 chr3R 9364107 exon CG18473 + chr3R 9364433 exon CG18473 + chr3R 9364759 3` UTR CG18473 + chr3R_8_9360001 chr3R_9360001 RAL-900_125b 2834 chr3R 9379097 9379160 chr3R 9379229 9379292 4 132 22.0 29.0 25.5 0.2 195 chr3R 9379097 intron FER - chr3R 9379194 intron FER - chr3R 9379292 intron FER - chr3R_4_9375001 chr3R_9375001 RAL-900_125b 2835 chr3R 9382773 9382843 chr3R 9382948 9383018 32 174 7.5 11.5 9.5 3.0 245 chr3R 9382773 intron FER - chr3R 9382896 intron FER - chr3R 9383018 intron FER - chr3R_32_9380001 chr3R_9380001 RAL-900_125b 2836 chr3R 9447440 9447453 chr3R 9447591 9447607 4 153 13.5 17.5 15.5 0.2 167 chr3R 9447440 intron ps + chr3R 9447524 intron ps + chr3R 9447607 intron ps + chr3R_4_9445001 chr3R_9445001 RAL-900_125b 2837 chr3R 9599774 9599831 chr3R 9599998 9600047 15 222 19.5 22.5 21.0 0.7 273 chr3R 9599774 intron CG8312 + chr3R 9599910 intron CG8312 + chr3R 9600047 intron CG8312 + chr3R_15_9595001 chr3R_9595001 RAL-900_125b 2838 chr3R 9601419 9601493 chr3R 9601587 9601661 26 166 14.0 16.5 15.2 1.6 242 chr3R 9601419 intron CG8312 + chr3R 9601540 intron CG8312 + chr3R 9601661 intron CG8312 + chr3R_26_9600001 chr3R_9600001 RAL-900_125b 2839 chr3R 9608614 9608689 chr3R 9608930 9609005 12 312 24.0 21.5 22.8 0.5 391 chr3R 9608614 intron CG8312 + chr3R 9608810 intron CG8312 + chr3R 9609005 intron CG8312 + chr3R_12_9605001 chr3R_9605001 RAL-900_125b 2840 chr3R 9620956 9620956 chr3R 21907535 21907536 5 12286579 35.5 33.5 34.5 0.1 12286580 chr3R 9620956 intron CG8312 + chr3R 15764246 intergenic not near genes chr3R 21907536 intergenic CG6678 + chr3R_5_15760001 chr3R_15760001 RAL-900_125b 2841 chr3R 9644540 9644601 chr3R 9644671 9644732 11 131 28.0 23.0 25.5 0.4 192 chr3R 9644540 intron Dh44 + chr3R 9644636 intron Dh44 + chr3R 9644732 intron Dh44 + chr3R_11_9640001 chr3R_9640001 RAL-900_125b 2842 chr3R 9647954 9648020 chr3R 9648428 9648494 14 474 24.0 26.5 25.2 0.5 540 chr3R 9647954 intron Dh44 + chr3R 9648224 intron Dh44 + chr3R 9648494 intron Dh44 + chr3R_14_9645001 chr3R_9645001 RAL-900_125b 2843 chr3R 9663575 9663651 chr3R 9663750 9663828 22 169 10.5 9.0 9.8 2.0 253 chr3R 9663575 intron CG9492 - chr3R 9663702 intron CG9492 - chr3R 9663828 intron CG9492 - chr3R_22_9660001 chr3R_9660001 RAL-900_125b 2844 chr3R 9699941 9699996 chr3R 9700080 9700135 1360 11 139 26.5 28.0 27.2 0.4 194 chr3R 9699941 intron Unc-115a - chr3R 9700038 intron Unc-115a - chr3R 9700135 intron Unc-115a - chr3R_11_9700001 chr3R_9700001 RAL-900_125b 2845 chr3R 9702220 9702265 chr3R 9702341 9702391 6 118 15.5 6.5 11.0 0.5 171 chr3R 9702220 intron Unc-115a - chr3R 9702306 intron Unc-115a - chr3R 9702391 intron Unc-115a - chr3R_6_9700001 chr3R_9700001 RAL-900_125b 2846 chr3R 9815416 9815454 chr3R 9815898 9815936 11 480 20.0 15.5 17.8 0.6 520 chr3R 9815416 intergenic eloF + chr3R 9815676 intergenic CG16904 - chr3R 9815936 3` UTR CG16904 - chr3R_11_9815001 chr3R_9815001 RAL-900_125b 2847 chr3R 9824454 9824531 chr3R 9824750 9824829 22 297 20.0 27.0 23.5 0.9 375 chr3R 9824454 3` UTR CR42858 - chr3R 9824642 3` UTR CR42858 - chr3R 9824829 intron CR42858 - chr3R_22_9820001 chr3R_9820001 RAL-900_125b 2848 chr3R 9853133 9853196 chr3R 9853292 9853355 12 159 26.0 18.5 22.2 0.5 222 chr3R 9853133 intron Teh1 - chr3R 9853244 intron Teh1 - chr3R 9853355 intron Teh1 - chr3R_12_9850001 chr3R_9850001 RAL-900_125b 2849 chr3R 9857763 9857836 chr3R 9858253 9858326 23 488 11.5 23.5 17.5 1.2 563 chr3R 9857763 intron Teh1 - chr3R 9858044 intron Teh1 - chr3R 9858326 intron Teh1 - chr3R_23_9855001 chr3R_9855001 RAL-900_125b 2850 chr3R 9898603 9898627 chr3R 9898696 9898776 10 124 28.0 25.5 26.8 0.4 173 chr3R 9898603 intron Glut4EF + chr3R 9898690 intron Glut4EF + chr3R 9898776 intron Glut4EF + chr3R_10_9895001 chr3R_9895001 RAL-900_125b 2851 chr3R 9936835 9936851 chr3R 9936961 9936975 5 126 22.0 23.5 22.8 0.2 140 chr3R 9936835 intron Glut4EF + chr3R 9936905 intron Glut4EF + chr3R 9936975 intron Glut4EF + chr3R_5_9935001 chr3R_9935001 RAL-900_125b 2852 chr3R 9936853 9936902 chr3R 9936955 9937023 12 121 18.5 22.5 20.5 0.6 170 chr3R 9936853 intron Glut4EF + chr3R 9936938 intron Glut4EF + chr3R 9937023 intron Glut4EF + chr3R_12_9935001 chr3R_9935001 RAL-900_125b 2853 chr3R 10023897 10023945 chr3R 10028434 10028499 9 4541 35.5 46.5 41.0 0.2 4602 chr3R 10023897 intron,intron Mical -,CG31407 - chr3R 10026198 intron Mical - chr3R 10028499 intron Mical - chr3R_9_10025001 chr3R_10025001 RAL-900_125b 2854 chr3R 10137667 10137707 chr3R 10137797 10137837 11 129 13.0 14.5 13.8 0.7 170 chr3R 10137667 intron tws - chr3R 10137752 intron tws - chr3R 10137837 intron tws - chr3R_11_10135001 chr3R_10135001 RAL-900_125b 2855 chr3R 10183058 10183097 chr3R 10183185 10183224 8 127 25.5 27.0 26.2 0.3 166 chr3R 10183058 intron CG12814 - chr3R 10183141 intron CG12814 - chr3R 10183224 intron CG12814 - chr3R_8_10180001 chr3R_10180001 RAL-900_125b 2856 chr3R 10196907 10196927 chr3R 10202944 10202964 297 9 6036 23.0 10.0 16.5 0.5 6057 chr3R 10196907 exon Syn + chr3R 10199936 intron Syn + chr3R 10202964 intron Syn + chr3R_9_10195001 chr3R_10195001 RAL-900_125b 2857 chr3R 10231742 10231813 chr3R 10237369 10237439 mdg3 33 5626 10.0 12.5 11.2 2.7 5697 chr3R 10231742 intron CG42795 + chr3R 10234590 intron CG42795 + chr3R 10237439 intron CG42795 + chr3R_33_10230001 chr3R_10230001 RAL-900_125b 2858 chr3R 10255341 10255384 chr3R 10260826 10260874 I-element 20 5489 16.0 14.5 15.2 1.2 5533 chr3R 10255341 intergenic Sirt6 -,CG3999 + chr3R 10258108 intron Sirt6 - chr3R 10260874 exon Sirt6 - chr3R_20_10255001 chr3R_10255001 RAL-900_125b 2859 chr3R 10306966 10307028 chr3R 10312175 10312237 19 5210 42.5 64.0 53.2 0.4 5271 chr3R 10306966 exon CG43143 + chr3R 10309602 exon CG6293 - chr3R 10312237 3` UTR Bruce - chr3R_19_10305001 chr3R_10305001 RAL-900_125b 2860 chr3R 10394028 10394090 chr3R 10394177 10394239 24 148 21.0 28.0 24.5 0.9 211 chr3R 10394028 intron cwo + chr3R 10394134 intron cwo + chr3R 10394239 intron cwo + chr3R_24_10390001 chr3R_10390001 RAL-900_125b 2861 chr3R 10427375 10427439 chr3R 10427535 10427599 10 160 20.0 13.0 16.5 0.6 224 chr3R 10427375 intergenic not near genes chr3R 10427487 intergenic not near genes chr3R 10427599 intergenic not near genes chr3R_10_10425001 chr3R_10425001 RAL-900_125b 2862 chr3R 10430634 10430707 chr3R 10430773 10430781 12 134 19.0 21.0 20.0 0.6 147 chr3R 10430634 intergenic not near genes chr3R 10430708 intergenic not near genes chr3R 10430781 intergenic not near genes chr3R_12_10430001 chr3R_10430001 RAL-900_125b 2863 chr3R 10526267 10526317 chr3R 10526571 10526630 20 304 22.5 19.0 20.8 0.9 363 chr3R 10526267 intron hth - chr3R 10526448 intron hth - chr3R 10526630 intron hth - chr3R_20_10525001 chr3R_10525001 RAL-900_125b 2864 chr3R 10572386 10572390 chr3R 10572515 10572519 4 130 14.5 8.0 11.2 0.3 133 chr3R 10572386 intron hth - chr3R 10572452 intron hth - chr3R 10572519 intron hth - chr3R_4_10570001 chr3R_10570001 RAL-900_125b 2865 chr3R 10593435 10593456 chr3R 10593572 10593591 6 135 21.5 36.5 29.0 0.2 156 chr3R 10593435 intron hth - chr3R 10593513 intron hth - chr3R 10593591 exon hth - chr3R_6_10590001 chr3R_10590001 RAL-900_125b 2866 chr3R 10596577 10596649 chr3R 10596700 10596740 9 118 11.5 10.5 11.0 0.8 163 chr3R 10596577 intron hth - chr3R 10596658 intron hth - chr3R 10596740 intron hth - chr3R_9_10595001 chr3R_10595001 RAL-900_125b 2867 chr3R 10651770 10651837 chr3R 10651919 10651986 19 149 8.5 16.0 12.2 1.4 216 chr3R 10651770 intergenic not near genes chr3R 10651878 intergenic not near genes chr3R 10651986 intergenic not near genes chr3R_19_10650001 chr3R_10650001 RAL-900_125b 2868 chr3R 10681951 10682018 chr3R 10682106 10682161 4 153 25.0 7.0 16.0 0.2 210 chr3R 10681951 intergenic not near genes chr3R 10682056 intergenic not near genes chr3R 10682161 intergenic CR44230 + chr3R_4_10680001 chr3R_10680001 RAL-900_125b 2869 chr3R 10723716 10723747 chr3R 10723858 10723889 6 142 32.5 24.5 28.5 0.2 173 chr3R 10723716 intergenic not near genes chr3R 10723802 intergenic not near genes chr3R 10723889 intergenic not near genes chr3R_6_10720001 chr3R_10720001 RAL-900_125b 2870 chr3R 10727594 10727675 chr3R 10727724 10727795 26 127 8.5 8.5 8.5 2.7 201 chr3R 10727594 intergenic not near genes chr3R 10727694 intergenic not near genes chr3R 10727795 intergenic not near genes chr3R_26_10725001 chr3R_10725001 RAL-900_125b 2871 chr3R 10732281 10732336 chr3R 10733203 10733258 18 922 13.5 21.5 17.5 1.0 977 chr3R 10732281 intergenic not near genes chr3R 10732770 intergenic not near genes chr3R 10733258 intergenic not near genes chr3R_18_10730001 chr3R_10730001 RAL-900_125b 2872 chr3R 10745379 10745452 chr3R 10745516 10745589 14 133 23.5 23.5 23.5 0.6 210 chr3R 10745379 intron TkR86C - chr3R 10745484 intron TkR86C - chr3R 10745589 intron TkR86C - chr3R_14_10745001 chr3R_10745001 RAL-900_125b 2873 chr3R 10752663 10752745 chr3R 10752808 10752865 8 134 21.5 22.0 21.8 0.4 202 chr3R 10752663 intergenic not near genes chr3R 10752764 intergenic not near genes chr3R 10752865 intergenic CG14691 - chr3R_8_10750001 chr3R_10750001 RAL-900_125b 2874 chr3R 10804071 10804197 chr3R 10811703 10811779 17.6 6 7599 17.0 26.0 21.5 0.3 7708 chr3R 10804071 intergenic CG14692 - chr3R 10807925 intergenic not near genes chr3R 10811779 3` UTR CG14693 - chr3R_6_10805001 chr3R_10805001 RAL-900_125b 2875 chr3R 10817174 10817239 chr3R 10817307 10817372 8 133 32.0 30.5 31.2 0.2 198 chr3R 10817174 3` UTR CG4089 + chr3R 10817273 3` UTR CG4089 + chr3R 10817372 3` UTR CG4089 + chr3R_8_10815001 chr3R_10815001 RAL-900_125b 2876 chr3R 10868546 10868593 chr3R 10868673 10868698 8 112 14.5 12.5 13.5 0.6 152 chr3R 10868546 5` UTR SelR - chr3R 10868622 5` UTR SelR - chr3R 10868698 intergenic Tsp86D +,SelR - chr3R_8_10865001 chr3R_10865001 RAL-900_125b 2877 chr3R 10868594 10868614 chr3R 10868671 10868682 4 89 11.5 12.5 12.0 0.3 88 chr3R 10868594 5` UTR SelR - chr3R 10868638 5` UTR SelR - chr3R 10868682 intergenic Tsp86D +,SelR - chr3R_4_10865001 chr3R_10865001 RAL-900_125b 2878 chr3R 10886821 10886893 chr3R 10886952 10887022 11 127 22.5 21.5 22.0 0.5 201 chr3R 10886821 intron Leash + chr3R 10886922 intron Leash + chr3R 10887022 intron Leash + chr3R_11_10885001 chr3R_10885001 RAL-900_125b 2879 chr3R 10904860 10904932 chr3R 10905114 10905186 21 254 17.5 25.0 21.2 0.9 326 chr3R 10904860 intergenic not near genes chr3R 10905023 intergenic not near genes chr3R 10905186 intergenic not near genes chr3R_21_10905001 chr3R_10905001 RAL-900_125b 2880 chr3R 10906781 10906854 chr3R 10906907 10906970 25 123 18.5 20.0 19.2 1.2 189 chr3R 10906781 intergenic not near genes chr3R 10906876 intergenic not near genes chr3R 10906970 intergenic not near genes chr3R_25_10905001 chr3R_10905001 RAL-900_125b 2881 chr3R 10919641 10919712 chr3R 10919769 10919840 28 127 6.5 8.0 7.2 3.4 199 chr3R 10919641 intergenic not near genes chr3R 10919740 intergenic not near genes chr3R 10919840 intergenic not near genes chr3R_28_10915001 chr3R_10915001 RAL-900_125b 2882 chr3R 10920003 10920069 chr3R 10920131 10920197 32 127 14.0 11.0 12.5 2.4 194 chr3R 10920003 intergenic not near genes chr3R 10920100 intergenic not near genes chr3R 10920197 intergenic not near genes chr3R_32_10920001 chr3R_10920001 RAL-900_125b 2883 chr3R 10956871 10956917 chr3R 10957003 10957049 10 132 17.0 18.0 17.5 0.5 178 chr3R 10956871 intergenic not near genes chr3R 10956960 intergenic not near genes chr3R 10957049 intergenic not near genes chr3R_10_10955001 chr3R_10955001 RAL-900_125b 2884 chr3R 10957814 10957875 chr3R 10963253 10963277 Rt1c 13 5429 7.5 4.0 5.8 1.9 5463 chr3R 10957814 intergenic not near genes chr3R 10960546 intergenic not near genes chr3R 10963277 intergenic not near genes chr3R_13_10960001 chr3R_10960001 RAL-900_125b 2885 chr3R 10957878 10957885 chr3R 10963252 10963312 Rt1c 4 5414 5.5 3.5 4.5 0.7 5434 chr3R 10957878 intergenic not near genes chr3R 10960595 intergenic not near genes chr3R 10963312 intergenic not near genes chr3R_4_10960001 chr3R_10960001 RAL-900_125b 2886 chr3R 10971441 10971484 chr3R 10971582 10971625 12 140 22.0 18.0 20.0 0.6 184 chr3R 10971441 intergenic not near genes chr3R 10971533 intergenic not near genes chr3R 10971625 intergenic not near genes chr3R_12_10970001 chr3R_10970001 RAL-900_125b 2887 chr3R 10971485 10971509 chr3R 10971571 10971609 10 130 18.0 16.5 17.2 0.5 124 chr3R 10971485 intergenic not near genes chr3R 10971547 intergenic not near genes chr3R 10971609 intergenic not near genes chr3R_10_10970001 chr3R_10970001 RAL-900_125b 2888 chr3R 10998431 10998451 chr3R 10998547 10998578 7 122 17.0 11.0 14.0 0.5 147 chr3R 10998431 intron CG34114 + chr3R 10998504 intron CG34114 + chr3R 10998578 intron CG34114 + chr3R_7_10995001 chr3R_10995001 RAL-900_125b 2889 chr3R 11043047 11043122 chr3R 11043203 11043278 16 155 12.5 16.0 14.2 1.1 231 chr3R 11043047 intron CG34114 + chr3R 11043162 intron CG34114 + chr3R 11043278 intron CG34114 + chr3R_16_11040001 chr3R_11040001 RAL-900_125b 2890 chr3R 11054540 11054604 chr3R 11054687 11054751 13 147 25.5 26.5 26.0 0.5 211 chr3R 11054540 intergenic not near genes chr3R 11054646 intergenic not near genes chr3R 11054751 intergenic not near genes chr3R_13_11050001 chr3R_11050001 RAL-900_125b 2891 chr3R 11056848 11056896 chr3R 11056976 11057024 14 128 10.0 1.0 5.5 2.2 176 chr3R 11056848 intergenic not near genes chr3R 11056936 intergenic not near genes chr3R 11057024 intergenic not near genes chr3R_14_11055001 chr3R_11055001 RAL-900_125b 2892 chr3R 11058981 11058991 chr3R 11059145 11059155 4 164 11.5 25.5 18.5 0.2 174 chr3R 11058981 intergenic not near genes chr3R 11059068 intergenic not near genes chr3R 11059155 intergenic not near genes chr3R_4_11055001 chr3R_11055001 RAL-900_125b 2893 chr3R 11058997 11059023 chr3R 11059117 11059165 8 153 16.0 25.0 20.5 0.4 168 chr3R 11058997 intergenic not near genes chr3R 11059081 intergenic not near genes chr3R 11059165 intergenic not near genes chr3R_8_11055001 chr3R_11055001 RAL-900_125b 2894 chr3R 11065551 11065582 chr3R 11071253 11071284 297 5 5701 6.5 6.5 6.5 0.7 5733 chr3R 11065551 intergenic not near genes chr3R 11068418 intergenic not near genes chr3R 11071284 intergenic not near genes chr3R_5_11065001 chr3R_11065001 RAL-900_125b 2895 chr3R 11065585 11065609 chr3R 11071248 11071311 297 5 5695 4.0 6.5 5.2 0.8 5726 chr3R 11065585 intergenic not near genes chr3R 11068448 intergenic not near genes chr3R 11071311 intergenic not near genes chr3R_5_11065001 chr3R_11065001 RAL-900_125b 2896 chr3R 11085411 11085491 chr3R 11085538 11085618 17 127 4.0 6.0 5.0 2.8 207 chr3R 11085411 3` UTR CR44940 - chr3R 11085514 intergenic CR44940 - chr3R 11085618 intergenic CR44940 - chr3R_17_11085001 chr3R_11085001 RAL-900_125b 2897 chr3R 11085735 11085799 chr3R 11086080 11086144 29 344 8.0 4.0 6.0 4.1 409 chr3R 11085735 intergenic CR44940 - chr3R 11085940 intergenic CR44940 - chr3R 11086144 intergenic not near genes chr3R_29_11085001 chr3R_11085001 RAL-900_125b 2898 chr3R 11151079 11151152 chr3R 11151324 11151346 23 241 9.5 14.0 11.8 1.8 267 chr3R 11151079 3` UTR Ugt86Di - chr3R 11151212 3` UTR Ugt86Di - chr3R 11151346 3` UTR Ugt86Di - chr3R_23_11150001 chr3R_11150001 RAL-900_125b 2899 chr3R 11197943 11198004 chr3R 11198092 11198153 22 149 11.0 9.5 10.2 2.0 210 chr3R 11197943 intron cu + chr3R 11198048 intron cu + chr3R 11198153 intron cu + chr3R_22_11195001 chr3R_11195001 RAL-900_125b 2900 chr3R 11220240 11220301 chr3R 11220404 11220470 32 169 4.5 9.0 6.8 4.1 230 chr3R 11220240 intergenic CG6693 -,CG6689 - chr3R 11220355 3` UTR CG6693 - chr3R 11220470 3` UTR CG6693 - chr3R_32_11220001 chr3R_11220001 RAL-900_125b 2901 chr3R 11247195 11247220 chr3R 11247326 11247351 INE-1 12 131 20.5 9.0 14.8 0.8 156 chr3R 11247195 intergenic CG5214 +,CR43283 - chr3R 11247273 intergenic CR43283 -,CG5214 + chr3R 11247351 intergenic CR43283 -,CG5214 + chr3R_12_11245001 chr3R_11245001 RAL-900_125b 2902 chr3R 11307166 11307210 chr3R 11307282 11307347 17 127 8.0 11.5 9.8 1.6 181 chr3R 11307166 intergenic not near genes chr3R 11307256 intergenic not near genes chr3R 11307347 intergenic not near genes chr3R_17_11305001 chr3R_11305001 RAL-900_125b 2903 chr3R 11342506 11342567 chr3R 11342632 11342693 28 126 8.5 9.0 8.8 2.9 187 chr3R 11342506 intron pros + chr3R 11342600 intron pros + chr3R 11342693 intron pros + chr3R_28_11340001 chr3R_11340001 RAL-900_125b 2904 chr3R 11379194 11379258 chr3R 11388397 11388425 roo 14 9201 9.0 6.5 7.8 1.6 9231 chr3R 11379194 intron pros + chr3R 11383810 intron pros + chr3R 11388425 intron pros + chr3R_14_11380001 chr3R_11380001 RAL-900_125b 2905 chr3R 11404904 11404968 chr3R 11405034 11405098 30 129 7.0 10.5 8.8 3.1 194 chr3R 11404904 3` UTR pros + chr3R 11405001 3` UTR pros + chr3R 11405098 3` UTR pros + chr3R_30_11405001 chr3R_11405001 RAL-900_125b 2906 chr3R 11442322 11442331 chr3R 11442557 11442563 4 234 17.5 17.5 17.5 0.2 241 chr3R 11442322 intron,intron sals -,CG17230 + chr3R 11442442 intron,intron sals -,CG17230 + chr3R 11442563 intron,intron sals -,CG17230 + chr3R_4_11440001 chr3R_11440001 RAL-900_125b 2907 chr3R 11442332 11442368 chr3R 11442532 11442603 20 227 8.5 10.0 9.2 2.0 271 chr3R 11442332 intron,intron sals -,CG17230 + chr3R 11442468 intron,intron sals -,CG17230 + chr3R 11442603 intron,intron sals -,CG17230 + chr3R_20_11440001 chr3R_11440001 RAL-900_125b 2908 chr3R 11471179 11471184 chr3R 15095974 15095979 5 3624795 17.5 39.5 28.5 0.2 3624800 chr3R 11471179 intergenic not near genes chr3R 13283579 exon CG8630 + chr3R 15095979 3` UTR CG42788 - chr3R_5_13280001 chr3R_13280001 RAL-900_125b 2909 chr3R 11518774 11518843 chr3R 11518915 11518981 26 141 10.5 11.0 10.8 2.2 207 chr3R 11518774 intergenic not near genes chr3R 11518878 intergenic not near genes chr3R 11518981 intergenic not near genes chr3R_26_11515001 chr3R_11515001 RAL-900_125b 2910 chr3R 11591231 11591287 chr3R 11592366 11592413 16 1142 28.0 36.5 32.2 0.5 1182 chr3R 11591231 exon Jupiter - chr3R 11591822 intron Jupiter - chr3R 11592413 intron Jupiter - chr3R_16_11590001 chr3R_11590001 RAL-900_125b 2911 chr3R 11592559 11592577 chr3R 11593629 11593653 5 1078 34.5 32.5 33.5 0.1 1094 chr3R 11592559 intron Jupiter - chr3R 11593106 intron Jupiter - chr3R 11593653 exon Jupiter - chr3R_5_11590001 chr3R_11590001 RAL-900_125b 2912 chr3R 11664741 11664819 chr3R 11664883 11664961 32 140 0.0 10.5 5.2 5.2 220 chr3R 11664741 intron CG42327 + chr3R 11664851 intron CG42327 + chr3R 11664961 intron CG42327 + chr3R_32_11660001 chr3R_11660001 RAL-900_125b 2913 chr3R 11694681 11694741 chr3R 11694824 11694884 33 143 9.5 12.0 10.8 2.8 203 chr3R 11694681 intergenic Fer3 - chr3R 11694782 intergenic Fer3 - chr3R 11694884 intergenic not near genes chr3R_33_11690001 chr3R_11690001 RAL-900_125b 2914 chr3R 11708674 11708691 chr3R 11708800 11708817 7 126 13.0 6.0 9.5 0.7 143 chr3R 11708674 intergenic not near genes chr3R 11708746 intergenic not near genes chr3R 11708817 intergenic not near genes chr3R_7_11705001 chr3R_11705001 RAL-900_125b 2915 chr3R 11734110 11734189 chr3R 11734279 11734358 28 163 3.5 1.0 2.2 8.8 248 chr3R 11734110 intergenic not near genes chr3R 11734234 intergenic not near genes chr3R 11734358 intergenic not near genes chr3R_28_11730001 chr3R_11730001 RAL-900_125b 2916 chr3R 11740440 11740513 chr3R 11743497 11743573 59 3058 79.0 79.5 79.2 0.7 3133 chr3R 11740440 exon Blm - chr3R 11742006 5` UTR CG14722 + chr3R 11743573 exon CG14722 + chr3R_59_11740001 chr3R_11740001 RAL-900_125b 2917 chr3R 11830312 11830358 chr3R 11830446 11830492 19 134 11.0 12.5 11.8 1.5 180 chr3R 11830312 intron CG6959 - chr3R 11830402 intron CG6959 - chr3R 11830492 intron CG6959 - chr3R_19_11830001 chr3R_11830001 RAL-900_125b 2918 chr3R 11830925 11830998 chr3R 11831119 11831180 12 192 0.0 8.5 4.2 2.3 255 chr3R 11830925 intron CG6959 - chr3R 11831052 intron CG6959 - chr3R 11831180 intron CG6959 - chr3R_12_11830001 chr3R_11830001 RAL-900_125b 2919 chr3R 11841020 11841058 chr3R 11846261 11846294 BS 12 5240 11.5 8.5 10.0 1.1 5274 chr3R 11841020 intron CG6959 - chr3R 11843657 intron CG6959 - chr3R 11846294 intron CG6959 - chr3R_12_11840001 chr3R_11840001 RAL-900_125b 2920 chr3R 11841062 11841068 chr3R 11846258 11846309 BS 4 5228 10.5 8.0 9.2 0.4 5247 chr3R 11841062 intron CG6959 - chr3R 11843686 intron CG6959 - chr3R 11846309 intron CG6959 - chr3R_4_11840001 chr3R_11840001 RAL-900_125b 2921 chr3R 11841070 11841085 chr3R 11846254 11846326 BS 8 5228 8.5 7.0 7.8 0.9 5256 chr3R 11841070 intron CG6959 - chr3R 11843698 intron CG6959 - chr3R 11846326 intron CG6959 - chr3R_8_11840001 chr3R_11840001 RAL-900_125b 2922 chr3R 11853409 11853462 chr3R 11853592 11853659 18 198 8.0 10.0 9.0 1.8 250 chr3R 11853409 intron CG6959 - chr3R 11853534 intron CG6959 - chr3R 11853659 intron CG6959 - chr3R_18_11850001 chr3R_11850001 RAL-900_125b 2923 chr3R 11853731 11853795 chr3R 11853886 11853948 36 155 9.5 11.0 10.2 3.2 217 chr3R 11853731 intron CG6959 - chr3R 11853840 intron CG6959 - chr3R 11853948 intron CG6959 - chr3R_36_11850001 chr3R_11850001 RAL-900_125b 2924 chr3R 11920930 11920999 chr3R 11921077 11921146 29 143 7.0 8.5 7.8 3.3 216 chr3R 11920930 intron Cad87A - chr3R 11921038 intron Cad87A - chr3R 11921146 intron Cad87A - chr3R_29_11920001 chr3R_11920001 RAL-900_125b 2925 chr3R 11990606 11990683 chr3R 11990744 11990821 21 138 7.5 7.5 7.5 2.5 215 chr3R 11990606 intron mfas - chr3R 11990714 intron mfas - chr3R 11990821 intron mfas - chr3R_21_11990001 chr3R_11990001 RAL-900_125b 2926 chr3R 11998915 11998963 chr3R 11999080 11999128 27 165 7.0 5.5 6.2 3.8 213 chr3R 11998915 intron Tk - chr3R 11999022 intron Tk - chr3R 11999128 intron Tk - chr3R_27_11995001 chr3R_11995001 RAL-900_125b 2927 chr3R 12016992 12017016 chr3R 12017119 12017142 14 127 9.0 15.0 12.0 1.1 150 chr3R 12016992 5` UTR CG3313 - chr3R 12017067 intergenic CG3313 -,Spt3 + chr3R 12017142 intergenic Spt3 +,CG3313 - chr3R_14_12015001 chr3R_12015001 RAL-900_125b 2928 chr3R 12022838 12022910 chr3R 12025065 12025137 pogo 31 2225 8.0 10.0 9.0 3.1 2299 chr3R 12022838 intergenic not near genes chr3R 12023988 intergenic not near genes chr3R 12025137 intergenic not near genes chr3R_31_12020001 chr3R_12020001 RAL-900_125b 2929 chr3R 12029895 12029958 chr3R 12030021 12030095 24 135 4.0 6.0 5.0 4.0 200 chr3R 12029895 3` UTR,5` UTR,5` UTR CG31358 -,CG42504 -,CG42505 - chr3R 12029995 3` UTR,5` UTR,5` UTR CG31358 -,CG42504 -,CG42505 - chr3R 12030095 exon,5` UTR,5` UTR CG31358 -,CG42504 -,CG42505 - chr3R_24_12025001 chr3R_12025001 RAL-900_125b 2930 chr3R 12045128 12045201 chr3R 12045254 12045327 34 126 12.0 10.5 11.2 2.8 199 chr3R 12045128 intergenic not near genes chr3R 12045228 intergenic not near genes chr3R 12045327 intergenic not near genes chr3R_34_12045001 chr3R_12045001 RAL-900_125b 2931 chr3R 12081968 12081998 chr3R 12082088 12082124 4 124 13.0 2.0 7.5 0.5 156 chr3R 12081968 intron CG14741 - chr3R 12082046 intron CG14741 - chr3R 12082124 intron CG14741 - chr3R_4_12080001 chr3R_12080001 RAL-900_125b 2932 chr3R 12169187 12169222 chr3R 12169315 12169350 18 128 18.0 11.0 14.5 1.2 163 chr3R 12169187 intergenic not near genes chr3R 12169268 intergenic not near genes chr3R 12169350 intergenic not near genes chr3R_18_12165001 chr3R_12165001 RAL-900_125b 2933 chr3R 12176634 12176708 chr3R 12176778 12176830 16 137 4.0 6.5 5.2 2.6 196 chr3R 12176634 intergenic not near genes chr3R 12176732 intergenic not near genes chr3R 12176830 intergenic not near genes chr3R_16_12175001 chr3R_12175001 RAL-900_125b 2934 chr3R 12183129 12183200 chr3R 12183265 12183336 37 135 5.0 5.5 5.2 6.0 207 chr3R 12183129 intergenic not near genes chr3R 12183232 intergenic not near genes chr3R 12183336 intergenic not near genes chr3R_37_12180001 chr3R_12180001 RAL-900_125b 2935 chr3R 12247092 12247168 chr3R 12247227 12247303 25 134 11.5 8.0 9.8 2.3 211 chr3R 12247092 intergenic not near genes chr3R 12247198 intergenic not near genes chr3R 12247303 intergenic not near genes chr3R_25_12245001 chr3R_12245001 RAL-900_125b 2936 chr3R 12267812 12267882 chr3R 12267942 12268012 36 130 11.5 8.5 10.0 3.3 200 chr3R 12267812 intron svp + chr3R 12267912 intron svp + chr3R 12268012 intron svp + chr3R_36_12265001 chr3R_12265001 RAL-900_125b 2937 chr3R 12274625 12274699 chr3R 12274801 12274875 35 176 5.0 9.0 7.0 4.4 250 chr3R 12274625 intron svp + chr3R 12274750 intron svp + chr3R 12274875 intron svp + chr3R_35_12270001 chr3R_12270001 RAL-900_125b 2938 chr3R 12297620 12297643 chr3R 12297734 12297764 10 116 17.0 15.0 16.0 0.6 144 chr3R 12297620 intron svp + chr3R 12297692 intron svp + chr3R 12297764 intron svp + chr3R_10_12295001 chr3R_12295001 RAL-900_125b 2939 chr3R 12307189 12307255 chr3R 12307322 12307388 35 133 8.0 12.5 10.2 3.1 199 chr3R 12307189 intergenic not near genes chr3R 12307288 intergenic not near genes chr3R 12307388 intergenic not near genes chr3R_35_12305001 chr3R_12305001 RAL-900_125b 2940 chr3R 12383821 12383855 chr3R 12383970 12384004 14 149 14.0 13.5 13.8 0.9 183 chr3R 12383821 intron GstD11 + chr3R 12383912 intron GstD11 + chr3R 12384004 intron GstD11 + chr3R_14_12380001 chr3R_12380001 RAL-900_125b 2941 chr3R 12392842 12392900 chr3R 12392992 12393008 17 144 7.5 11.5 9.5 1.6 166 chr3R 12392842 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12392925 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393008 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_17_12390001 chr3R_12390001 RAL-900_125b 2942 chr3R 12522303 12522384 chr3R 12522439 12522492 30 130 6.5 6.0 6.2 4.2 189 chr3R 12522303 exon Octbeta3R - chr3R 12522398 5` UTR Octbeta3R - chr3R 12522492 5` UTR Octbeta3R - chr3R_30_12520001 chr3R_12520001 RAL-900_125b 2943 chr3R 12599337 12599401 chr3R 12599458 12599534 22 131 8.5 6.5 7.5 2.6 197 chr3R 12599337 intergenic not near genes chr3R 12599436 intergenic not near genes chr3R 12599534 intergenic not near genes chr3R_22_12595001 chr3R_12595001 RAL-900_125b 2944 chr3R 12605431 12605447 chr3R 12605565 12605581 6 134 5.5 6.0 5.8 0.9 150 chr3R 12605431 intergenic not near genes chr3R 12605506 intergenic not near genes chr3R 12605581 intergenic not near genes chr3R_6_12605001 chr3R_12605001 RAL-900_125b 2945 chr3R 12710209 12710272 chr3R 12713285 12713347 21 3073 48.0 46.5 47.2 0.4 3138 chr3R 12710209 exon mus308 - chr3R 12711778 exon mus308 - chr3R 12713347 3` UTR Men - chr3R_21_12710001 chr3R_12710001 RAL-900_125b 2946 chr3R 12725948 12725970 chr3R 12726055 12726125 9 135 7.5 1.0 4.2 1.7 177 chr3R 12725948 intergenic not near genes chr3R 12726036 intergenic not near genes chr3R 12726125 intergenic not near genes chr3R_9_12725001 chr3R_12725001 RAL-900_125b 2947 chr3R 12735133 12735183 chr3R 12735433 12735483 34 299 6.5 10.0 8.2 3.7 350 chr3R 12735133 intergenic not near genes chr3R 12735308 intergenic not near genes chr3R 12735483 intergenic not near genes chr3R_34_12735001 chr3R_12735001 RAL-900_125b 2948 chr3R 12748917 12748986 chr3R 12749060 12749129 25 143 10.5 9.0 9.8 2.3 212 chr3R 12748917 intron beat-Vc - chr3R 12749023 intron beat-Vc - chr3R 12749129 intron beat-Vc - chr3R_25_12745001 chr3R_12745001 RAL-900_125b 2949 chr3R 12763078 12763149 chr3R 12763216 12763276 23 130 0.0 10.0 5.0 3.8 198 chr3R 12763078 intron beat-Vc - chr3R 12763177 intron beat-Vc - chr3R 12763276 intron beat-Vc - chr3R_23_12760001 chr3R_12760001 RAL-900_125b 2950 chr3R 12787891 12787953 chr3R 12788024 12788086 23 133 7.5 6.0 6.8 2.9 195 chr3R 12787891 intergenic not near genes chr3R 12787988 intergenic not near genes chr3R 12788086 intergenic not near genes chr3R_23_12785001 chr3R_12785001 RAL-900_125b 2951 chr3R 12839444 12839452 chr3R 12839980 12839995 5 542 16.0 8.5 12.2 0.4 551 chr3R 12839444 intergenic not near genes chr3R 12839720 intergenic not near genes chr3R 12839995 intergenic not near genes chr3R_5_12835001 chr3R_12835001 RAL-900_125b 2952 chr3R 12839455 12839505 chr3R 12839977 12840048 24 539 6.5 8.0 7.2 2.9 593 chr3R 12839455 intergenic not near genes chr3R 12839752 intergenic not near genes chr3R 12840048 intergenic not near genes chr3R_24_12835001 chr3R_12835001 RAL-900_125b 2953 chr3R 12864535 12864575 chr3R 12865070 12865110 roo 14 535 7.5 11.0 9.2 1.4 575 chr3R 12864535 intergenic not near genes chr3R 12864822 intergenic not near genes chr3R 12865110 intergenic not near genes chr3R_14_12860001 chr3R_12860001 RAL-900_125b 2954 chr3R 12866439 12866513 chr3R 12866640 12866714 25 200 8.0 6.5 7.2 3.0 275 chr3R 12866439 intergenic not near genes chr3R 12866576 intergenic not near genes chr3R 12866714 intergenic not near genes chr3R_25_12865001 chr3R_12865001 RAL-900_125b 2955 chr3R 12881793 12881805 chr3R 12881926 12881938 8 133 4.5 19.0 11.8 0.6 145 chr3R 12881793 intergenic not near genes chr3R 12881866 intergenic not near genes chr3R 12881938 intergenic not near genes chr3R_8_12880001 chr3R_12880001 RAL-900_125b 2956 chr3R 12920117 12920178 chr3R 12925370 12925424 copia 22 5251 5.5 15.5 10.5 1.9 5307 chr3R 12920117 intron beat-Vb + chr3R 12922770 intron beat-Vb + chr3R 12925424 intron beat-Vb + chr3R_22_12920001 chr3R_12920001 RAL-900_125b 2957 chr3R 13045790 13045842 chr3R 13052982 13053037 43 7191 64.0 80.5 72.2 0.6 7247 chr3R 13045790 exon Hsc70-2 + chr3R 13049414 3` UTR CG7966 - chr3R 13053037 intron pic + chr3R_43_13045001 chr3R_13045001 RAL-900_125b 2958 chr3R 13059911 13059976 chr3R 13060156 13060221 27 245 10.5 13.5 12.0 2.1 310 chr3R 13059911 intron sim + chr3R 13060066 intron sim + chr3R 13060221 intron sim + chr3R_27_13060001 chr3R_13060001 RAL-900_125b 2959 chr3R 13066954 13067125 chr3R 13067091 13067251 34 130 2.0 0.0 1.0 17.0 297 chr3R 13066954 intron sim + chr3R 13067102 intron sim + chr3R 13067251 intron sim + chr3R_34_13065001 chr3R_13065001 RAL-900_125b 2960 chr3R 13103972 13104003 chr3R 13104099 13104130 15 126 5.5 0.0 2.8 3.9 158 chr3R 13103972 intron timeout + chr3R 13104051 intron timeout + chr3R 13104130 intron timeout + chr3R_15_13100001 chr3R_13100001 RAL-900_125b 2961 chr3R 13120722 13120793 chr3R 13120849 13120910 30 125 6.5 8.0 7.2 3.7 188 chr3R 13120722 intron timeout + chr3R 13120816 intron timeout + chr3R 13120910 intron timeout + chr3R_30_13120001 chr3R_13120001 RAL-900_125b 2962 chr3R 13135789 13135848 chr3R 13138014 13138073 pogo 18 2225 10.0 11.0 10.5 1.6 2284 chr3R 13135789 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136931 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138073 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_18_13135001 chr3R_13135001 RAL-900_125b 2963 chr3R 13142990 13143060 chr3R 13148616 13148675 mdg3 28 5622 7.0 7.5 7.2 3.4 5685 chr3R 13142990 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145832 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148675 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_28_13145001 chr3R_13145001 RAL-900_125b 2964 chr3R 13194054 13194121 chr3R 13194693 13194760 26 639 7.0 12.5 9.8 2.4 706 chr3R 13194054 intergenic not near genes chr3R 13194407 intergenic not near genes chr3R 13194760 intergenic not near genes chr3R_26_13190001 chr3R_13190001 RAL-900_125b 2965 chr3R 13195912 13195982 chr3R 13196057 13196117 30 142 6.0 7.0 6.5 4.0 205 chr3R 13195912 intergenic not near genes chr3R 13196014 intergenic not near genes chr3R 13196117 intergenic not near genes chr3R_30_13195001 chr3R_13195001 RAL-900_125b 2966 chr3R 13311592 13311639 chr3R 13318893 13318940 Doc 7 7300 31.0 3.5 17.2 0.4 7348 chr3R 13311592 exon CG32473 + chr3R 13315266 intergenic not near genes chr3R 13318940 intergenic CG45080 - chr3R_7_13315001 chr3R_13315001 RAL-900_125b 2967 chr3R 13391593 13391655 chr3R 13391721 13391783 19 127 10.5 11.0 10.8 1.6 190 chr3R 13391593 intron CCHa2 - chr3R 13391688 intron CCHa2 - chr3R 13391783 intron CCHa2 - chr3R_19_13390001 chr3R_13390001 RAL-900_125b 2968 chr3R 13394629 13394672 chr3R 13395028 13395071 16 397 9.0 6.0 7.5 1.9 442 chr3R 13394629 intron CCHa2 - chr3R 13394850 intron CCHa2 - chr3R 13395071 5` UTR CCHa2 - chr3R_16_13390001 chr3R_13390001 RAL-900_125b 2969 chr3R 13394681 13394696 chr3R 13395024 13395074 5 371 4.0 5.5 4.8 0.9 393 chr3R 13394681 intron CCHa2 - chr3R 13394878 intron CCHa2 - chr3R 13395074 5` UTR CCHa2 - chr3R_5_13390001 chr3R_13390001 RAL-900_125b 2970 chr3R 13400974 13401026 chr3R 13401115 13401167 18 141 11.5 0.0 5.8 2.6 193 chr3R 13400974 intron CG9796 - chr3R 13401070 intron CG9796 - chr3R 13401167 intron CG9796 - chr3R_18_13400001 chr3R_13400001 RAL-900_125b 2971 chr3R 13418615 13418681 chr3R 13418741 13418807 35 126 5.0 7.0 6.0 5.0 192 chr3R 13418615 intergenic not near genes chr3R 13418711 intergenic not near genes chr3R 13418807 intergenic not near genes chr3R_35_13415001 chr3R_13415001 RAL-900_125b 2972 chr3R 13478993 13478999 chr3R 13479078 13479086 5 98 11.0 7.5 9.2 0.5 93 chr3R 13478993 intergenic CR45589 + chr3R 13479040 intergenic CR45589 + chr3R 13479086 intergenic CR45589 + chr3R_5_13475001 chr3R_13475001 RAL-900_125b 2973 chr3R 13505812 13505855 chr3R 13505938 13505981 19 123 19.5 10.5 15.0 1.2 169 chr3R 13505812 intergenic not near genes chr3R 13505896 intergenic not near genes chr3R 13505981 intergenic not near genes chr3R_19_13505001 chr3R_13505001 RAL-900_125b 2974 chr3R 13517180 13517258 chr3R 13520047 13520124 jockey 23 2866 9.5 0.0 4.8 4.0 2944 chr3R 13517180 intergenic not near genes chr3R 13518652 intergenic not near genes chr3R 13520124 intergenic not near genes chr3R_23_13515001 chr3R_13515001 RAL-900_125b 2975 chr3R 13525148 13525163 chr3R 13525294 13525305 7 148 14.0 7.0 10.5 0.6 157 chr3R 13525148 intergenic not near genes chr3R 13525226 intergenic not near genes chr3R 13525305 intergenic not near genes chr3R_7_13525001 chr3R_13525001 RAL-900_125b 2976 chr3R 13525165 13525186 chr3R 13525290 13525338 12 149 10.0 6.0 8.0 1.3 173 chr3R 13525165 intergenic not near genes chr3R 13525252 intergenic not near genes chr3R 13525338 intergenic not near genes chr3R_12_13525001 chr3R_13525001 RAL-900_125b 2977 chr3R 13568436 13568451 chr3R 13568563 13568578 9 125 13.5 11.5 12.5 0.7 142 chr3R 13568436 intergenic not near genes chr3R 13568507 intergenic not near genes chr3R 13568578 intergenic not near genes chr3R_9_13565001 chr3R_13565001 RAL-900_125b 2978 chr3R 13580800 13580830 chr3R 13580927 13580957 5 125 13.0 19.5 16.2 0.3 157 chr3R 13580800 intergenic not near genes chr3R 13580878 intergenic not near genes chr3R 13580957 intergenic not near genes chr3R_5_13580001 chr3R_13580001 RAL-900_125b 2979 chr3R 13599167 13599239 chr3R 13599328 13599350 28 159 4.0 3.5 3.8 5.8 183 chr3R 13599167 intergenic not near genes chr3R 13599258 intergenic not near genes chr3R 13599350 intergenic not near genes chr3R_28_13595001 chr3R_13595001 RAL-900_125b 2980 chr3R 13603008 13603077 chr3R 13603149 13603218 30 139 8.5 8.5 8.5 3.2 210 chr3R 13603008 intergenic not near genes chr3R 13603113 intergenic not near genes chr3R 13603218 intergenic not near genes chr3R_30_13600001 chr3R_13600001 RAL-900_125b 2981 chr3R 13609499 13609574 chr3R 13609650 13609718 21 148 0.0 0.0 0.0 21.0 219 chr3R 13609499 intergenic CG9759 - chr3R 13609608 intergenic CG9759 - chr3R 13609718 intergenic CG9759 - chr3R_21_13605001 chr3R_13605001 RAL-900_125b 2982 chr3R 13625642 13625718 chr3R 13625773 13625849 30 130 8.0 7.0 7.5 3.5 207 chr3R 13625642 intergenic not near genes chr3R 13625746 intergenic not near genes chr3R 13625849 intergenic not near genes chr3R_30_13625001 chr3R_13625001 RAL-900_125b 2983 chr3R 13659737 13659847 chr3R 13659929 13659985 12 147 0.0 0.5 0.2 10.0 248 chr3R 13659737 intron Hrb87F - chr3R 13659861 intron Hrb87F - chr3R 13659985 intron Hrb87F - chr3R_12_13655001 chr3R_13655001 RAL-900_125b 2984 chr3R 13712571 13712650 chr3R 13712718 13712796 12 145 5.0 5.0 5.0 2.0 225 chr3R 13712571 3` UTR CR34044 - chr3R 13712684 3` UTR CR34044 - chr3R 13712796 3` UTR CR34044 - chr3R_12_13710001 chr3R_13710001 RAL-900_125b 2985 chr3R 13758092 13758170 chr3R 13758228 13758306 10 132 0.0 3.0 1.5 4.0 214 chr3R 13758092 intron CG34383 + chr3R 13758199 intron CG34383 + chr3R 13758306 intron CG34383 + chr3R_10_13755001 chr3R_13755001 RAL-900_125b 2986 chr3R 13803861 13804119 chr3R 13804115 13804239 4 225 0.0 0.0 0.0 4.0 378 chr3R 13803861 intergenic not near genes chr3R 13804050 intergenic not near genes chr3R 13804239 intergenic not near genes chr3R_4_13800001 chr3R_13800001 RAL-900_125b 2987 chr3R 13863646 13863713 chr3R 13863771 13863835 26 135 10.5 5.0 7.8 3.0 189 chr3R 13863646 intergenic not near genes chr3R 13863740 intergenic not near genes chr3R 13863835 intergenic not near genes chr3R_26_13860001 chr3R_13860001 RAL-900_125b 2988 chr3R 13880498 13880568 chr3R 13880669 13880738 26 164 9.0 6.0 7.5 3.1 240 chr3R 13880498 intergenic not near genes chr3R 13880618 intergenic not near genes chr3R 13880738 intergenic not near genes chr3R_26_13880001 chr3R_13880001 RAL-900_125b 2989 chr3R 13909870 13909906 chr3R 13910000 13910036 10 129 6.0 10.0 8.0 1.1 166 chr3R 13909870 intergenic not near genes chr3R 13909953 intergenic not near genes chr3R 13910036 intergenic not near genes chr3R_10_13905001 chr3R_13905001 RAL-900_125b 2990 chr3R 13974471 13974495 chr3R 13974598 13974622 9 127 6.5 10.0 8.2 1.0 151 chr3R 13974471 intron,5` UTR rdx -,CR43460 + chr3R 13974546 intron,5` UTR rdx -,CR43460 + chr3R 13974622 intron,5` UTR rdx -,CR43460 + chr3R_9_13970001 chr3R_13970001 RAL-900_125b 2991 chr3R 14029812 14029861 chr3R 14029950 14029999 27 137 5.5 8.5 7.0 3.4 187 chr3R 14029812 intron,exon rdx -,Cyp6d5 + chr3R 14029906 intron,intron rdx -,Cyp6d5 + chr3R 14029999 intron,intron rdx -,Cyp6d5 + chr3R_27_14025001 chr3R_14025001 RAL-900_125b 2992 chr3R 14037543 14037589 chr3R 14037674 14037723 9 134 8.0 9.0 8.5 0.9 180 chr3R 14037543 intergenic not near genes chr3R 14037633 intergenic not near genes chr3R 14037723 intergenic not near genes chr3R_9_14035001 chr3R_14035001 RAL-900_125b 2993 chr3R 14062798 14062864 chr3R 14062925 14062991 39 127 6.0 8.5 7.2 4.8 193 chr3R 14062798 intron foxo + chr3R 14062894 intron foxo + chr3R 14062991 intron foxo + chr3R_39_14060001 chr3R_14060001 RAL-900_125b 2994 chr3R 14067091 14067138 chr3R 14067220 14067267 24 128 7.5 0.0 3.8 5.0 176 chr3R 14067091 exon foxo + chr3R 14067179 intron foxo + chr3R 14067267 intron foxo + chr3R_24_14065001 chr3R_14065001 RAL-900_125b 2995 chr3R 14083358 14083410 chr3R 14083509 14083521 9 145 14.0 0.0 7.0 1.1 163 chr3R 14083358 intron foxo + chr3R 14083440 intron foxo + chr3R 14083521 intron foxo + chr3R_9_14080001 chr3R_14080001 RAL-900_125b 2996 chr3R 14132415 14132439 chr3R 14132578 14132602 11 163 0.0 14.0 7.0 1.4 187 chr3R 14132415 intergenic CG14356 - chr3R 14132508 intergenic CG14356 - chr3R 14132602 intergenic not near genes chr3R_11_14130001 chr3R_14130001 RAL-900_125b 2997 chr3R 14136137 14136264 chr3R 14136264 14136390 9 136 0.0 0.0 0.0 9.0 253 chr3R 14136137 intergenic not near genes chr3R 14136264 intergenic not near genes chr3R 14136390 intergenic not near genes chr3R_9_14135001 chr3R_14135001 RAL-900_125b 2998 chr3R 14180767 14180832 chr3R 14185582 14185647 F-element 25 4813 9.0 5.5 7.2 3.0 4880 chr3R 14180767 intron Dop1R1 - chr3R 14183207 intron Dop1R1 - chr3R 14185647 intron Dop1R1 - chr3R_25_14180001 chr3R_14180001 RAL-900_125b 2999 chr3R 14194408 14194461 chr3R 14203592 14203645 roo 31 9184 7.5 0.0 3.8 6.5 9237 chr3R 14194408 intron Dop1R1 - chr3R 14199026 intron Dop1R1 - chr3R 14203645 intron Dop1R1 - chr3R_31_14195001 chr3R_14195001 RAL-900_125b 3000 chr3R 14226940 14227001 chr3R 14227086 14227147 29 146 12.0 8.5 10.2 2.6 207 chr3R 14226940 intergenic CG9631 - chr3R 14227044 intergenic CG9631 - chr3R 14227147 intergenic CG9631 - chr3R_29_14225001 chr3R_14225001 RAL-900_125b 3001 chr3R 14235654 14235719 chr3R 14235789 14235852 20 133 6.0 11.5 8.8 2.0 198 chr3R 14235654 intergenic not near genes chr3R 14235753 intergenic not near genes chr3R 14235852 intergenic not near genes chr3R_20_14235001 chr3R_14235001 RAL-900_125b 3002 chr3R 14236894 14236914 chr3R 14244436 14244456 Idefix 4 7539 13.5 5.5 9.5 0.4 7562 chr3R 14236894 exon CG43291 - chr3R 14240675 intron CG43291 - chr3R 14244456 intron CG43291 - chr3R_4_14240001 chr3R_14240001 RAL-900_125b 3003 chr3R 14246354 14246365 chr3R 14247897 14247910 jockey 4 1544 20.0 11.0 15.5 0.2 1556 chr3R 14246354 intergenic not near genes chr3R 14247132 intergenic not near genes chr3R 14247910 intergenic not near genes chr3R_4_14245001 chr3R_14245001 RAL-900_125b 3004 chr3R 14246366 14246416 chr3R 14247895 14247962 jockey 16 1540 11.5 11.0 11.2 1.3 1596 chr3R 14246366 intergenic not near genes chr3R 14247164 intergenic not near genes chr3R 14247962 intergenic not near genes chr3R_16_14245001 chr3R_14245001 RAL-900_125b 3005 chr3R 14345990 14346042 chr3R 14346201 14346246 21 215 7.0 8.0 7.5 2.5 256 chr3R 14345990 intron NK7.1 - chr3R 14346118 intron NK7.1 - chr3R 14346246 intron NK7.1 - chr3R_21_14345001 chr3R_14345001 RAL-900_125b 3006 chr3R 14386168 14386232 chr3R 14386298 14386366 4 133 0.0 3.5 1.8 1.4 198 chr3R 14386168 intergenic not near genes chr3R 14386267 intergenic not near genes chr3R 14386366 intergenic not near genes chr3R_4_14385001 chr3R_14385001 RAL-900_125b 3007 chr3R 14426007 14426076 chr3R 14426161 14426220 24 152 10.5 6.5 8.5 2.5 213 chr3R 14426007 intron cv-c - chr3R 14426114 intron cv-c - chr3R 14426220 intron cv-c - chr3R_24_14425001 chr3R_14425001 RAL-900_125b 3008 chr3R 14440685 14440703 chr3R 14440811 14440829 8 126 0.0 10.5 5.2 1.3 144 chr3R 14440685 intron cv-c - chr3R 14440757 intron cv-c - chr3R 14440829 intron cv-c - chr3R_8_14440001 chr3R_14440001 RAL-900_125b 3009 chr3R 14440708 14440748 chr3R 14440804 14440874 20 124 2.5 9.5 6.0 2.9 166 chr3R 14440708 intron cv-c - chr3R 14440791 intron cv-c - chr3R 14440874 intron cv-c - chr3R_20_14440001 chr3R_14440001 RAL-900_125b 3010 chr3R 14453267 14453346 chr3R 14453458 14453537 32 185 7.5 9.0 8.2 3.5 270 chr3R 14453267 intron cv-c - chr3R 14453402 intron cv-c - chr3R 14453537 intron cv-c - chr3R_32_14450001 chr3R_14450001 RAL-900_125b 3011 chr3R 14497362 14497438 chr3R 14497493 14497569 25 130 11.5 7.0 9.2 2.5 207 chr3R 14497362 intron CR44177 + chr3R 14497466 intron CR44177 + chr3R 14497569 intron CR44177 + chr3R_25_14495001 chr3R_14495001 RAL-900_125b 3012 chr3R 14514437 14514500 chr3R 14514572 14514635 38 135 12.5 8.0 10.2 3.4 198 chr3R 14514437 3` UTR Pde6 - chr3R 14514536 3` UTR Pde6 - chr3R 14514635 3` UTR Pde6 - chr3R_38_14510001 chr3R_14510001 RAL-900_125b 3013 chr3R 14533518 14533592 chr3R 14533657 14533730 6 138 0.0 9.5 4.8 1.0 212 chr3R 14533518 intron Pde6 - chr3R 14533624 intron Pde6 - chr3R 14533730 intron Pde6 - chr3R_6_14530001 chr3R_14530001 RAL-900_125b 3014 chr3R 14548532 14548593 chr3R 14548670 14548721 21 134 11.5 6.5 9.0 2.1 189 chr3R 14548532 intron Pde6 - chr3R 14548626 intron Pde6 - chr3R 14548721 intron Pde6 - chr3R_21_14545001 chr3R_14545001 RAL-900_125b 3015 chr3R 14563977 14563986 chr3R 14564127 14564136 5 150 0.0 7.5 3.8 1.0 159 chr3R 14563977 intergenic CG8087 - chr3R 14564056 intergenic CG8087 - chr3R 14564136 intergenic CG8087 - chr3R_5_14560001 chr3R_14560001 RAL-900_125b 3016 chr3R 14577908 14577976 chr3R 14578074 14578142 26 166 11.5 6.5 9.0 2.6 234 chr3R 14577908 intron stumps + chr3R 14578025 intron stumps + chr3R 14578142 intron stumps + chr3R_26_14575001 chr3R_14575001 RAL-900_125b 3017 chr3R 14589003 14589069 chr3R 14589154 14589209 26 150 8.0 8.5 8.2 2.8 206 chr3R 14589003 intron stumps + chr3R 14589106 intron stumps + chr3R 14589209 intron stumps + chr3R_26_14585001 chr3R_14585001 RAL-900_125b 3018 chr3R 14608422 14608473 chr3R 14608564 14608615 17 142 5.0 9.5 7.2 2.1 193 chr3R 14608422 intergenic stumps + chr3R 14608518 intergenic stumps + chr3R 14608615 intergenic not near genes chr3R_17_14605001 chr3R_14605001 RAL-900_125b 3019 chr3R 14632124 14632135 chr3R 14632263 14632274 4 139 0.0 15.5 7.8 0.5 150 chr3R 14632124 intron,intron CG7886 -,Cad88C + chr3R 14632199 intron,intron CG7886 -,Cad88C + chr3R 14632274 intron,intron CG7886 -,Cad88C + chr3R_4_14630001 chr3R_14630001 RAL-900_125b 3020 chr3R 14662268 14662337 chr3R 14662399 14662468 23 126 9.0 9.0 9.0 2.3 200 chr3R 14662268 exon Rad17 - chr3R 14662368 intron Rad17 - chr3R 14662468 exon Rad17 - chr3R_23_14660001 chr3R_14660001 RAL-900_125b 3021 chr3R 14686184 14686249 chr3R 14686614 14686679 22 429 10.5 10.0 10.2 2.0 495 chr3R 14686184 intron Meltrin - chr3R 14686432 intron Meltrin - chr3R 14686679 intron Meltrin - chr3R_22_14685001 chr3R_14685001 RAL-900_125b 3022 chr3R 14704341 14704413 chr3R 14704468 14704484 29 125 4.5 13.5 9.0 2.9 143 chr3R 14704341 intron kibra - chr3R 14704412 intron kibra - chr3R 14704484 intron kibra - chr3R_29_14700001 chr3R_14700001 RAL-900_125b 3023 chr3R 14764528 14764576 chr3R 14764669 14764720 24 142 10.5 11.0 10.8 2.0 192 chr3R 14764528 intron jvl + chr3R 14764624 intron jvl + chr3R 14764720 intron jvl + chr3R_24_14760001 chr3R_14760001 RAL-900_125b 3024 chr3R 14771695 14771760 chr3R 14772197 14772261 21 504 42.5 64.5 53.5 0.4 566 chr3R 14771695 intron jvl + chr3R 14771978 intron jvl + chr3R 14772261 intron jvl + chr3R_21_14770001 chr3R_14770001 RAL-900_125b 3025 chr3R 14824489 14824565 chr3R 14824633 14824701 20 139 10.0 0.0 5.0 3.3 212 chr3R 14824489 intron btsz - chr3R 14824595 intron btsz - chr3R 14824701 intron btsz - chr3R_20_14820001 chr3R_14820001 RAL-900_125b 3026 chr3R 14840906 14840972 chr3R 14841042 14841098 22 134 10.0 10.0 10.0 2.0 192 chr3R 14840906 intron btsz - chr3R 14841002 intron btsz - chr3R 14841098 intron btsz - chr3R_22_14840001 chr3R_14840001 RAL-900_125b 3027 chr3R 14853323 14853336 chr3R 14853450 14853463 4 127 6.0 4.5 5.2 0.6 140 chr3R 14853323 intron btsz - chr3R 14853393 intron btsz - chr3R 14853463 intron btsz - chr3R_4_14850001 chr3R_14850001 RAL-900_125b 3028 chr3R 14898428 14898499 chr3R 14898598 14898669 33 170 5.0 6.0 5.5 5.1 241 chr3R 14898428 intergenic Nup93-2 -,CG3817 + chr3R 14898548 intergenic Nup93-2 -,CG3817 + chr3R 14898669 intergenic CG3817 +,Nup93-2 - chr3R_33_14895001 chr3R_14895001 RAL-900_125b 3029 chr3R 14911527 14911536 chr3R 14911678 14911680 5 153 0.5 8.5 4.5 0.9 153 chr3R 14911527 intergenic not near genes chr3R 14911604 intergenic not near genes chr3R 14911680 intergenic not near genes chr3R_5_14910001 chr3R_14910001 RAL-900_125b 3030 chr3R 14911539 14911598 chr3R 14911673 14911749 17 150 0.5 7.5 4.0 3.4 210 chr3R 14911539 intergenic not near genes chr3R 14911644 intergenic not near genes chr3R 14911749 intergenic not near genes chr3R_17_14910001 chr3R_14910001 RAL-900_125b 3031 chr3R 14944854 14944896 chr3R 14944985 14945027 24 131 11.5 7.5 9.5 2.3 173 chr3R 14944854 intergenic not near genes chr3R 14944940 intergenic not near genes chr3R 14945027 intergenic not near genes chr3R_24_14940001 chr3R_14940001 RAL-900_125b 3032 chr3R 14973538 14973612 chr3R 14974077 14974151 28 538 8.0 8.0 8.0 3.1 613 chr3R 14973538 intergenic not near genes chr3R 14973844 intergenic not near genes chr3R 14974151 intergenic not near genes chr3R_28_14970001 chr3R_14970001 RAL-900_125b 3033 chr3R 15006818 15006879 chr3R 15007247 15007307 28 427 8.5 15.5 12.0 2.2 489 chr3R 15006818 intergenic not near genes chr3R 15007062 intergenic not near genes chr3R 15007307 intergenic not near genes chr3R_28_15005001 chr3R_15005001 RAL-900_125b 3034 chr3R 15032454 15032463 chr3R 15032591 15032600 5 137 0.0 11.5 5.8 0.7 146 chr3R 15032454 intergenic not near genes chr3R 15032527 intergenic not near genes chr3R 15032600 intergenic not near genes chr3R_5_15030001 chr3R_15030001 RAL-900_125b 3035 chr3R 15036960 15037034 chr3R 15037094 15037132 23 132 8.5 9.5 9.0 2.3 172 chr3R 15036960 intergenic RpL10Aa + chr3R 15037046 intergenic RpL10Aa + chr3R 15037132 intergenic RpL10Aa + chr3R_23_15035001 chr3R_15035001 RAL-900_125b 3036 chr3R 15041383 15041418 chr3R 15045201 15045236 Doc 15 3818 16.0 0.0 8.0 1.7 3853 chr3R 15041383 intergenic not near genes chr3R 15043310 intergenic not near genes chr3R 15045236 intergenic not near genes chr3R_15_15040001 chr3R_15040001 RAL-900_125b 3037 chr3R 15041424 15041446 chr3R 15045242 15045264 Doc 8 3818 8.0 3.0 5.5 1.2 3840 chr3R 15041424 intergenic not near genes chr3R 15043344 intergenic not near genes chr3R 15045264 intergenic not near genes chr3R_8_15040001 chr3R_15040001 RAL-900_125b 3038 chr3R 15049404 15049476 chr3R 15049580 15049652 30 176 12.0 4.5 8.2 3.3 248 chr3R 15049404 intergenic not near genes chr3R 15049528 intergenic not near genes chr3R 15049652 intergenic not near genes chr3R_30_15045001 chr3R_15045001 RAL-900_125b 3039 chr3R 15059237 15059259 chr3R 15059498 15059499 BS 7 258 0.0 4.0 2.0 2.3 262 chr3R 15059237 intron dpr9 - chr3R 15059368 intron dpr9 - chr3R 15059499 intron dpr9 - chr3R_7_15055001 chr3R_15055001 RAL-900_125b 3040 chr3R 15071147 15071212 chr3R 15071322 15071387 27 175 4.5 8.5 6.5 3.6 240 chr3R 15071147 intron dpr9 - chr3R 15071267 intron dpr9 - chr3R 15071387 intron dpr9 - chr3R_27_15070001 chr3R_15070001 RAL-900_125b 3041 chr3R 15075826 15075877 chr3R 15075953 15076004 22 125 11.0 0.0 5.5 3.4 178 chr3R 15075826 intron dpr9 - chr3R 15075915 intron dpr9 - chr3R 15076004 intron dpr9 - chr3R_22_15075001 chr3R_15075001 RAL-900_125b 3042 chr3R 15079760 15079839 chr3R 15080051 15080123 pogo 24 289 15.0 0.0 7.5 2.8 363 chr3R 15079760 3` UTR CG6966 - chr3R 15079942 3` UTR CG6966 - chr3R 15080123 3` UTR CG6966 - chr3R_24_15075001 chr3R_15075001 RAL-900_125b 3043 chr3R 15087178 15087221 chr3R 15087306 15087331 11 124 12.0 7.0 9.5 1.0 153 chr3R 15087178 intron CG6966 - chr3R 15087254 intron CG6966 - chr3R 15087331 intron CG6966 - chr3R_11_15085001 chr3R_15085001 RAL-900_125b 3044 chr3R 15102448 15102506 chr3R 15109755 15109813 412 30 7307 14.5 6.0 10.2 2.7 7365 chr3R 15102448 intron CG42788 - chr3R 15106130 intron CG42788 - chr3R 15109813 intron CG42788 - chr3R_30_15105001 chr3R_15105001 RAL-900_125b 3045 chr3R 15114864 15114905 chr3R 15114990 15115031 15 125 17.0 9.0 13.0 1.1 167 chr3R 15114864 intron CG42788 - chr3R 15114948 intron CG42788 - chr3R 15115031 intron CG42788 - chr3R_15_15110001 chr3R_15110001 RAL-900_125b 3046 chr3R 15132027 15132066 chr3R 15135137 15135176 Juan 31 3109 25.0 33.0 29.0 1.0 3149 chr3R 15132027 intergenic CG42788 - chr3R 15133602 intergenic not near genes chr3R 15135176 3` UTR CG6912 - chr3R_31_15130001 chr3R_15130001 RAL-900_125b 3047 chr3R 15130873 15130919 chr3R 15141184 15141230 17 10313 59.5 51.0 55.2 0.3 10357 chr3R 15130873 intron CG42788 - chr3R 15136052 exon CG6912 - chr3R 15141230 exon CG3987 + chr3R_17_15135001 chr3R_15135001 RAL-900_125b 3048 chr3R 15162500 15162561 chr3R 15167311 15167379 F-element 12 4817 8.5 6.0 7.2 1.5 4879 chr3R 15162500 intron Gyc88E + chr3R 15164940 intron Gyc88E + chr3R 15167379 intron Gyc88E + chr3R_12_15160001 chr3R_15160001 RAL-900_125b 3049 chr3R 15190611 15190677 chr3R 15190786 15190822 35 174 5.5 15.0 10.2 3.1 211 chr3R 15190611 3` UTR Gyc88E + chr3R 15190716 3` UTR Gyc88E + chr3R 15190822 3` UTR Gyc88E + chr3R_35_15190001 chr3R_15190001 RAL-900_125b 3050 chr3R 15302186 15302256 chr3R 15302321 15302389 7 135 9.0 8.0 8.5 0.7 203 chr3R 15302186 intron Tm1 + chr3R 15302288 intron Tm1 + chr3R 15302389 intron Tm1 + chr3R_7_15300001 chr3R_15300001 RAL-900_125b 3051 chr3R 15328270 15328323 chr3R 15328401 15328454 22 131 12.5 6.5 9.5 2.1 184 chr3R 15328270 intergenic CG6236 -,ea + chr3R 15328362 intergenic CG6236 -,ea + chr3R 15328454 intergenic CG6236 -,ea + chr3R_22_15325001 chr3R_15325001 RAL-900_125b 3052 chr3R 15406103 15406156 chr3R 15406234 15406287 19 131 12.0 5.5 8.8 1.9 184 chr3R 15406103 intron CG6125 - chr3R 15406195 intron CG6125 - chr3R 15406287 intron CG6125 - chr3R_19_15405001 chr3R_15405001 RAL-900_125b 3053 chr3R 15407020 15407090 chr3R 15407154 15407215 26 135 7.5 4.5 6.0 3.7 195 chr3R 15407020 5` UTR CG6125 - chr3R 15407118 intergenic CG6125 - chr3R 15407215 intergenic CG6125 - chr3R_26_15405001 chr3R_15405001 RAL-900_125b 3054 chr3R 15416206 15416266 chr3R 15416336 15416396 28 129 12.0 9.0 10.5 2.4 190 chr3R 15416206 3` UTR Atx2 + chr3R 15416301 3` UTR Atx2 + chr3R 15416396 3` UTR Atx2 + chr3R_28_15415001 chr3R_15415001 RAL-900_125b 3055 chr3R 15445866 15445905 chr3R 15446001 15446040 17 135 8.0 0.0 4.0 3.4 174 chr3R 15445866 exon AdamTS-A - chr3R 15445953 intron AdamTS-A - chr3R 15446040 intron AdamTS-A - chr3R_17_15445001 chr3R_15445001 RAL-900_125b 3056 chr3R 15571203 15571497 chr3R 15571360 15571638 70 145 8.0 11.0 9.5 6.7 435 chr3R 15571203 intergenic not near genes chr3R 15571420 intergenic not near genes chr3R 15571638 intergenic not near genes chr3R_70_15570001 chr3R_15570001 RAL-900_125b 3057 chr3R 15576394 15576403 chr3R 15576527 15576536 6 133 6.5 4.5 5.5 0.9 142 chr3R 15576394 intergenic not near genes chr3R 15576465 intergenic not near genes chr3R 15576536 intergenic not near genes chr3R_6_15575001 chr3R_15575001 RAL-900_125b 3058 chr3R 15585757 15585827 chr3R 15585948 15586018 33 186 9.5 8.0 8.8 3.4 261 chr3R 15585757 intergenic not near genes chr3R 15585888 intergenic not near genes chr3R 15586018 intergenic not near genes chr3R_33_15585001 chr3R_15585001 RAL-900_125b 3059 chr3R 15601128 15601188 chr3R 15608700 15608760 412 19 7570 10.5 14.0 12.2 1.4 7632 chr3R 15601128 intergenic not near genes chr3R 15604944 intergenic not near genes chr3R 15608760 intergenic not near genes chr3R_19_15600001 chr3R_15600001 RAL-900_125b 3060 chr3R 15610512 15610586 chr3R 15610638 15610712 16 123 7.0 8.5 7.8 1.8 200 chr3R 15610512 intergenic not near genes chr3R 15610612 intergenic not near genes chr3R 15610712 intergenic not near genes chr3R_16_15610001 chr3R_15610001 RAL-900_125b 3061 chr3R 15618702 15618764 chr3R 15626226 15626288 blood 24 7523 4.5 10.5 7.5 2.8 7586 chr3R 15618702 intergenic not near genes chr3R 15622495 intergenic not near genes chr3R 15626288 intergenic not near genes chr3R_24_15620001 chr3R_15620001 RAL-900_125b 3062 chr3R 15639290 15639367 chr3R 15639626 15639703 32 336 3.0 2.5 2.8 8.4 413 chr3R 15639290 intergenic not near genes chr3R 15639496 intergenic not near genes chr3R 15639703 intergenic not near genes chr3R_32_15635001 chr3R_15635001 RAL-900_125b 3063 chr3R 15691143 15691305 chr3R 15691286 15691442 20 148 0.0 0.0 0.0 20.0 299 chr3R 15691143 intergenic not near genes chr3R 15691292 intergenic not near genes chr3R 15691442 intergenic not near genes chr3R_20_15690001 chr3R_15690001 RAL-900_125b 3064 chr3R 15708274 15708284 chr3R 15708423 15708433 4 149 0.0 8.0 4.0 0.8 159 chr3R 15708274 3` UTR CG5404 + chr3R 15708354 3` UTR CG5404 + chr3R 15708433 3` UTR CG5404 + chr3R_4_15705001 chr3R_15705001 RAL-900_125b 3065 chr3R 15709600 15709660 chr3R 15709763 15709814 14 174 7.0 6.0 6.5 1.9 214 chr3R 15709600 intergenic not near genes chr3R 15709707 intergenic not near genes chr3R 15709814 intergenic not near genes chr3R_14_15705001 chr3R_15705001 RAL-900_125b 3066 chr3R 15711226 15711283 chr3R 15711355 15711412 20 129 10.5 12.5 11.5 1.6 186 chr3R 15711226 intergenic not near genes chr3R 15711319 intergenic not near genes chr3R 15711412 intergenic not near genes chr3R_20_15710001 chr3R_15710001 RAL-900_125b 3067 chr3R 15718377 15718443 chr3R 15724757 15724823 34 6380 45.0 37.5 41.2 0.8 6446 chr3R 15718377 intergenic not near genes chr3R 15721600 intergenic not near genes chr3R 15724823 intergenic not near genes chr3R_34_15720001 chr3R_15720001 RAL-900_125b 3068 chr3R 15718263 15718325 chr3R 15724868 15724930 27 6605 57.0 51.5 54.2 0.5 6667 chr3R 15718263 intergenic not near genes chr3R 15721596 intergenic not near genes chr3R 15724930 intergenic not near genes chr3R_27_15720001 chr3R_15720001 RAL-900_125b 3069 chr3R 15735196 15735237 chr3R 15739966 15740007 F-element 19 4770 9.0 7.5 8.2 2.1 4811 chr3R 15735196 intergenic not near genes chr3R 15737602 intergenic not near genes chr3R 15740007 intergenic not near genes chr3R_19_15735001 chr3R_15735001 RAL-900_125b 3070 chr3R 15779603 15779666 chr3R 15779734 15779797 27 131 11.5 8.5 10.0 2.5 194 chr3R 15779603 intergenic CG5614 + chr3R 15779700 intergenic CG5614 + chr3R 15779797 intergenic CG5614 + chr3R_27_15775001 chr3R_15775001 RAL-900_125b 3071 chr3R 15878052 15878101 chr3R 15878190 15878239 20 138 8.5 8.5 8.5 2.1 187 chr3R 15878052 intergenic not near genes chr3R 15878146 intergenic not near genes chr3R 15878239 intergenic not near genes chr3R_20_15875001 chr3R_15875001 RAL-900_125b 3072 chr3R 15891618 15891684 chr3R 15892060 15892126 20 442 11.0 9.5 10.2 1.8 508 chr3R 15891618 intron CG14877 - chr3R 15891872 intron CG14877 - chr3R 15892126 intron CG14877 - chr3R_20_15890001 chr3R_15890001 RAL-900_125b 3073 chr3R 15924876 15924953 chr3R 15925014 15925091 4 138 11.0 4.5 7.8 0.5 215 chr3R 15924876 intron CG4221 + chr3R 15924984 intron CG4221 + chr3R 15925091 intron CG4221 + chr3R_4_15920001 chr3R_15920001 RAL-900_125b 3074 chr3R 16048808 16048867 chr3R 16048948 16049007 41 132 13.5 9.0 11.2 3.4 199 chr3R 16048808 exon ird5 - chr3R 16048908 intron ird5 - chr3R 16049007 intron ird5 - chr3R_41_16045001 chr3R_16045001 RAL-900_125b 3075 chr3R 16048871 16048878 chr3R 16048945 16049018 6 129 9.0 8.0 8.5 0.6 147 chr3R 16048871 intron ird5 - chr3R 16048944 intron ird5 - chr3R 16049018 intron ird5 - chr3R_6_16045001 chr3R_16045001 RAL-900_125b 3076 chr3R 16073394 16073472 chr3R 16073548 16073626 28 153 7.5 9.5 8.5 2.9 232 chr3R 16073394 exon Mhcl - chr3R 16073510 intron Mhcl - chr3R 16073626 intron Mhcl - chr3R_28_16070001 chr3R_16070001 RAL-900_125b 3077 chr3R 16111417 16111470 chr3R 16111543 16111596 7 123 12.0 13.5 12.8 0.5 179 chr3R 16111417 intergenic not near genes chr3R 16111506 intergenic not near genes chr3R 16111596 intergenic not near genes chr3R_7_16110001 chr3R_16110001 RAL-900_125b 3078 chr3R 16189363 16189434 chr3R 16189816 16189887 invader4 31 453 10.5 11.5 11.0 2.6 524 chr3R 16189363 intron sra + chr3R 16189625 intron sra + chr3R 16189887 intron sra + chr3R_31_16185001 chr3R_16185001 RAL-900_125b 3079 chr3R 16226762 16226774 chr3R 16226890 16226902 6 128 11.5 15.5 13.5 0.4 140 chr3R 16226762 intron tara + chr3R 16226832 intron tara + chr3R 16226902 intron tara + chr3R_6_16225001 chr3R_16225001 RAL-900_125b 3080 chr3R 16364637 16364651 chr3R 16364764 16364778 12 127 19.0 0.0 9.5 1.1 141 chr3R 16364637 intron CG14880 - chr3R 16364708 intron CG14880 - chr3R 16364778 intron CG14880 - chr3R_12_16360001 chr3R_16360001 RAL-900_125b 3081 chr3R 16368405 16368456 chr3R 16368534 16368583 24 127 12.5 8.0 10.2 2.1 178 chr3R 16368405 intergenic CG14880 -,CG10317 - chr3R 16368494 intergenic CG14880 -,CG10317 - chr3R 16368583 intergenic CG10317 -,CG14880 - chr3R_24_16365001 chr3R_16365001 RAL-900_125b 3082 chr3R 16368459 16368474 chr3R 16368588 16368603 5 129 8.0 18.5 13.2 0.4 144 chr3R 16368459 intergenic CG14880 -,CG10317 - chr3R 16368531 intergenic CG14880 -,CG10317 - chr3R 16368603 intergenic CG10317 -,CG14880 - chr3R_5_16365001 chr3R_16365001 RAL-900_125b 3083 chr3R 16472541 16472587 chr3R 16472667 16472713 19 124 15.0 15.5 15.2 1.2 172 chr3R 16472541 intergenic Gyc-89Da + chr3R 16472627 5` UTR Gyc-89Da + chr3R 16472713 5` UTR Gyc-89Da + chr3R_19_16470001 chr3R_16470001 RAL-900_125b 3084 chr3R 16582870 16582916 chr3R 16582989 16583045 14 127 7.5 9.5 8.5 1.5 175 chr3R 16582870 intron Scp2 - chr3R 16582958 intron Scp2 - chr3R 16583045 intron Scp2 - chr3R_14_16580001 chr3R_16580001 RAL-900_125b 3085 chr3R 16620339 16620402 chr3R 16620529 16620592 28 190 0.0 10.5 5.2 4.5 253 chr3R 16620339 intergenic CG14893 +,CG17560 + chr3R 16620466 intergenic CG14893 + chr3R 16620592 intergenic CG14893 + chr3R_28_16620001 chr3R_16620001 RAL-900_125b 3086 chr3R 16633649 16633679 chr3R 16633798 16633829 13 149 19.0 13.0 16.0 0.8 180 chr3R 16633649 intron Fas1 + chr3R 16633739 intron Fas1 + chr3R 16633829 intron Fas1 + chr3R_13_16630001 chr3R_16630001 RAL-900_125b 3087 chr3R 16671488 16671533 chr3R 16671598 16671604 22 122 7.0 9.0 8.0 2.4 116 chr3R 16671488 intron Ubx - chr3R 16671546 intron Ubx - chr3R 16671604 intron Ubx - chr3R_22_16670001 chr3R_16670001 RAL-900_125b 3088 chr3R 16731882 16731947 chr3R 16732011 16732077 14 119 7.5 10.0 8.8 1.4 195 chr3R 16731882 intron Ubx - chr3R 16731980 intron Ubx - chr3R 16732077 intron Ubx - chr3R_14_16730001 chr3R_16730001 RAL-900_125b 3089 chr3R 16743933 16743976 chr3R 16744079 16744122 18 145 15.5 4.5 10.0 1.6 189 chr3R 16743933 intron bxd - chr3R 16744028 intron bxd - chr3R 16744122 intron bxd - chr3R_18_16740001 chr3R_16740001 RAL-900_125b 3090 chr3R 16756279 16756300 chr3R 16762519 16762541 diver 10 6240 9.5 5.5 7.5 1.2 6262 chr3R 16756279 intron bxd - chr3R 16759410 intron bxd - chr3R 16762541 intron bxd - chr3R_10_16755001 chr3R_16755001 RAL-900_125b 3091 chr3R 16756304 16756351 chr3R 16762517 16762529 diver 7 6227 3.5 4.5 4.0 1.4 6225 chr3R 16756304 intron bxd - chr3R 16759416 intron bxd - chr3R 16762529 intron bxd - chr3R_7_16755001 chr3R_16755001 RAL-900_125b 3092 chr3R 16795982 16796054 chr3R 16796568 16796640 19 584 6.0 9.0 7.5 2.2 658 chr3R 16795982 intergenic not near genes chr3R 16796311 intergenic not near genes chr3R 16796640 intergenic not near genes chr3R_19_16795001 chr3R_16795001 RAL-900_125b 3093 chr3R 16799777 16799840 chr3R 16800151 16800221 26 375 0.0 5.5 2.8 6.8 444 chr3R 16799777 intergenic not near genes chr3R 16799999 intergenic not near genes chr3R 16800221 intergenic CR45750 + chr3R_26_16795001 chr3R_16795001 RAL-900_125b 3094 chr3R 16845109 16845146 chr3R 16845247 16845284 14 138 12.5 5.5 9.0 1.4 175 chr3R 16845109 intron iab-8 - chr3R 16845196 intron iab-8 - chr3R 16845284 intron iab-8 - chr3R_14_16845001 chr3R_16845001 RAL-900_125b 3095 chr3R 16856567 16856631 chr3R 16856726 16856792 13 159 6.0 2.5 4.2 2.5 225 chr3R 16856567 intron iab-8 - chr3R 16856680 intron iab-8 - chr3R 16856792 intron iab-8 - chr3R_13_16855001 chr3R_16855001 RAL-900_125b 3096 chr3R 16860291 16860370 chr3R 16860413 16860498 20 124 6.0 4.0 5.0 3.3 207 chr3R 16860291 intron iab-8 - chr3R 16860394 intron iab-8 - chr3R 16860498 intron iab-8 - chr3R_20_16860001 chr3R_16860001 RAL-900_125b 3097 chr3R 17165964 17166035 chr3R 17166264 17166342 8 302 7.5 0.0 3.8 1.7 378 chr3R 17165964 intron Mur89F - chr3R 17166153 intron Mur89F - chr3R 17166342 intron Mur89F - chr3R_8_17165001 chr3R_17165001 RAL-900_125b 3098 chr3R 17184688 17184757 chr3R 17184814 17184883 22 126 8.5 8.0 8.2 2.4 195 chr3R 17184688 intron Mur89F - chr3R 17184786 intron Mur89F - chr3R 17184883 intron Mur89F - chr3R_22_17180001 chr3R_17180001 RAL-900_125b 3099 chr3R 17194358 17194430 chr3R 17194487 17194559 26 127 7.0 7.5 7.2 3.2 201 chr3R 17194358 intron Mur89F - chr3R 17194458 intron Mur89F - chr3R 17194559 intron Mur89F - chr3R_26_17190001 chr3R_17190001 RAL-900_125b 3100 chr3R 17209673 17209703 chr3R 17209811 17209835 11 137 15.0 15.0 15.0 0.7 162 chr3R 17209673 intergenic not near genes chr3R 17209754 intergenic not near genes chr3R 17209835 intergenic not near genes chr3R_11_17205001 chr3R_17205001 RAL-900_125b 3101 chr3R 17294358 17294434 chr3R 17294485 17294530 28 120 10.0 12.0 11.0 2.3 172 chr3R 17294358 intergenic not near genes chr3R 17294444 intergenic not near genes chr3R 17294530 intergenic not near genes chr3R_28_17290001 chr3R_17290001 RAL-900_125b 3102 chr3R 17294632 17294690 chr3R 17295110 17295168 BS 23 478 11.0 14.0 12.5 1.7 536 chr3R 17294632 intergenic not near genes chr3R 17294900 intergenic not near genes chr3R 17295168 intergenic not near genes chr3R_23_17290001 chr3R_17290001 RAL-900_125b 3103 chr3R 17346652 17346709 chr3R 17348265 17348317 F-element 30 1613 7.0 13.5 10.2 2.7 1665 chr3R 17346652 intron beat-IIa - chr3R 17347484 intron beat-IIa - chr3R 17348317 intron beat-IIa - chr3R_30_17345001 chr3R_17345001 RAL-900_125b 3104 chr3R 17452508 17452569 chr3R 17452758 17452819 35 250 8.5 8.5 8.5 3.7 311 chr3R 17452508 intergenic not near genes chr3R 17452664 intergenic not near genes chr3R 17452819 intergenic not near genes chr3R_35_17450001 chr3R_17450001 RAL-900_125b 3105 chr3R 17461152 17461223 chr3R 17461284 17461355 25 132 9.0 8.0 8.5 2.6 203 chr3R 17461152 intergenic not near genes chr3R 17461254 intergenic not near genes chr3R 17461355 intergenic not near genes chr3R_25_17460001 chr3R_17460001 RAL-900_125b 3106 chr3R 17467561 17467622 chr3R 17467722 17467783 21 160 6.5 5.0 5.8 3.1 222 chr3R 17467561 intergenic not near genes chr3R 17467672 intergenic not near genes chr3R 17467783 intergenic not near genes chr3R_21_17465001 chr3R_17465001 RAL-900_125b 3107 chr3R 17497916 17497987 chr3R 17498052 17498123 27 136 5.5 8.0 6.8 3.5 207 chr3R 17497916 intron Dscam3 - chr3R 17498020 intron Dscam3 - chr3R 17498123 intron Dscam3 - chr3R_27_17495001 chr3R_17495001 RAL-900_125b 3108 chr3R 17507399 17507478 chr3R 17507527 17507606 23 128 6.0 3.0 4.5 4.2 207 chr3R 17507399 intergenic not near genes chr3R 17507502 intergenic not near genes chr3R 17507606 intergenic not near genes chr3R_23_17505001 chr3R_17505001 RAL-900_125b 3109 chr3R 17509206 17509241 chr3R 17516804 17516838 412 13 7593 4.5 10.5 7.5 1.5 7632 chr3R 17509206 intergenic not near genes chr3R 17513022 intergenic not near genes chr3R 17516838 intergenic not near genes chr3R_13_17510001 chr3R_17510001 RAL-900_125b 3110 chr3R 17522251 17522298 chr3R 17522400 17522448 6 143 4.5 7.0 5.8 0.9 197 chr3R 17522251 intergenic not near genes chr3R 17522350 intergenic not near genes chr3R 17522448 intergenic not near genes chr3R_6_17520001 chr3R_17520001 RAL-900_125b 3111 chr3R 17591248 17591260 chr3R 17591729 17591740 F-element 4 481 19.0 15.5 17.2 0.2 492 chr3R 17591248 intergenic not near genes chr3R 17591494 intergenic not near genes chr3R 17591740 intergenic not near genes chr3R_4_17590001 chr3R_17590001 RAL-900_125b 3112 chr3R 17591263 17591302 chr3R 17591723 17591788 F-element 19 479 12.5 14.5 13.5 1.3 525 chr3R 17591263 intergenic not near genes chr3R 17591526 intergenic not near genes chr3R 17591788 intergenic not near genes chr3R_19_17590001 chr3R_17590001 RAL-900_125b 3113 chr3R 17612411 17612430 chr3R 17612571 17612592 9 161 16.0 5.0 10.5 0.8 181 chr3R 17612411 intergenic CG34281 + chr3R 17612502 intergenic CG34281 + chr3R 17612592 intergenic CG34281 + chr3R_9_17610001 chr3R_17610001 RAL-900_125b 3114 chr3R 17638309 17638330 chr3R 17638845 17638866 roo 6 536 0.0 22.0 11.0 0.5 557 chr3R 17638309 intron CG43175 + chr3R 17638588 intron CG43175 + chr3R 17638866 intron,intron CG43175 +,CR45222 + chr3R_6_17635001 chr3R_17635001 RAL-900_125b 3115 chr3R 17645665 17645693 chr3R 17645845 17645873 12 180 12.0 9.5 10.8 1.0 208 chr3R 17645665 intergenic CG43175 + chr3R 17645769 intergenic not near genes chr3R 17645873 intergenic not near genes chr3R_12_17645001 chr3R_17645001 RAL-900_125b 3116 chr3R 17725023 17725086 chr3R 17725167 17725216 22 140 8.0 0.0 4.0 4.4 193 chr3R 17725023 5` UTR Atg8b - chr3R 17725120 intergenic Atg8b - chr3R 17725216 intergenic Atg8b - chr3R_22_17725001 chr3R_17725001 RAL-900_125b 3117 chr3R 17734078 17734134 chr3R 17734216 17734273 12 136 8.5 15.0 11.8 0.9 195 chr3R 17734078 exon CG14321 + chr3R 17734176 3` UTR CG14321 + chr3R 17734273 3` UTR CG14321 + chr3R_12_17730001 chr3R_17730001 RAL-900_125b 3118 chr3R 17734797 17734860 chr3R 17734961 17735024 44 164 6.5 0.0 3.2 10.5 227 chr3R 17734797 intergenic CG14321 + chr3R 17734910 intergenic not near genes chr3R 17735024 intergenic not near genes chr3R_44_17730001 chr3R_17730001 RAL-900_125b 3119 chr3R 17763115 17763189 chr3R 17763651 17763731 roo 6 535 9.0 3.0 6.0 0.9 616 chr3R 17763115 5` UTR TyrR - chr3R 17763423 intergenic TyrR - chr3R 17763731 intergenic not near genes chr3R_6_17760001 chr3R_17760001 RAL-900_125b 3120 chr3R 17773348 17773392 chr3R 17773478 17773522 13 129 8.5 10.0 9.2 1.3 174 chr3R 17773348 exon CG43102 - chr3R 17773435 intron CG43102 - chr3R 17773522 exon CG43102 - chr3R_13_17770001 chr3R_17770001 RAL-900_125b 3121 chr3R 17812044 17812119 chr3R 17812170 17812245 19 125 11.0 8.0 9.5 1.8 201 chr3R 17812044 intron tinc + chr3R 17812144 intron tinc + chr3R 17812245 intron tinc + chr3R_19_17810001 chr3R_17810001 RAL-900_125b 3122 chr3R 17823158 17823235 chr3R 17823293 17823370 20 134 7.5 5.0 6.2 2.8 212 chr3R 17823158 intron tinc + chr3R 17823264 intron tinc + chr3R 17823370 intron tinc + chr3R_20_17820001 chr3R_17820001 RAL-900_125b 3123 chr3R 17840400 17840420 chr3R 17840527 17840547 9 127 9.0 15.5 12.2 0.7 147 chr3R 17840400 intron tinc + chr3R 17840474 intron tinc + chr3R 17840547 intron tinc + chr3R_9_17840001 chr3R_17840001 RAL-900_125b 3124 chr3R 17842795 17842832 chr3R 17843123 17843180 21 341 8.0 8.5 8.2 2.3 385 chr3R 17842795 intron tinc + chr3R 17842988 intron tinc + chr3R 17843180 intron tinc + chr3R_21_17840001 chr3R_17840001 RAL-900_125b 3125 chr3R 17856007 17856045 chr3R 17856155 17856196 13 149 13.5 7.5 10.5 1.1 189 chr3R 17856007 intron tinc + chr3R 17856102 intron tinc + chr3R 17856196 intron tinc + chr3R_13_17855001 chr3R_17855001 RAL-900_125b 3126 chr3R 17895324 17895331 chr3R 17895465 17895472 4 141 10.0 8.5 9.2 0.4 148 chr3R 17895324 intron Rim - chr3R 17895398 intron Rim - chr3R 17895472 intron Rim - chr3R_4_17895001 chr3R_17895001 RAL-900_125b 3127 chr3R 17895333 17895377 chr3R 17895464 17895518 22 139 3.0 8.0 5.5 3.4 185 chr3R 17895333 intron Rim - chr3R 17895426 intron Rim - chr3R 17895518 intron Rim - chr3R_22_17895001 chr3R_17895001 RAL-900_125b 3128 chr3R 17898324 17898353 chr3R 17898456 17898485 10 129 7.5 16.0 11.8 0.8 161 chr3R 17898324 intron Rim - chr3R 17898404 intron Rim - chr3R 17898485 intron Rim - chr3R_10_17895001 chr3R_17895001 RAL-900_125b 3129 chr3R 17899044 17899059 chr3R 17899172 17899187 12 128 12.5 6.0 9.2 1.2 143 chr3R 17899044 intron Rim - chr3R 17899116 intron Rim - chr3R 17899187 intron Rim - chr3R_12_17895001 chr3R_17895001 RAL-900_125b 3130 chr3R 17925824 17925844 chr3R 17927331 17927357 hobo 7 1513 18.0 8.0 13.0 0.5 1533 chr3R 17925824 intron cpo + chr3R 17926590 intron cpo + chr3R 17927357 intron cpo + chr3R_7_17925001 chr3R_17925001 RAL-900_125b 3131 chr3R 17976487 17976521 chr3R 17976650 17976689 4 167 6.0 0.0 3.0 1.0 202 chr3R 17976487 intron cpo + chr3R 17976588 intron cpo + chr3R 17976689 intron cpo + chr3R_4_17975001 chr3R_17975001 RAL-900_125b 3132 chr3R 18002990 18002996 chr3R 18003136 18003142 4 146 20.5 0.0 10.2 0.4 152 chr3R 18002990 intron cpo + chr3R 18003066 intron cpo + chr3R 18003142 intron cpo + chr3R_4_18000001 chr3R_18000001 RAL-900_125b 3133 chr3R 18003005 18003039 chr3R 18003135 18003185 13 142 13.5 0.0 6.8 1.7 180 chr3R 18003005 intron cpo + chr3R 18003095 intron cpo + chr3R 18003185 intron cpo + chr3R_13_18000001 chr3R_18000001 RAL-900_125b 3134 chr3R 18018885 18018955 chr3R 18019025 18019086 18 138 1.5 7.0 4.2 3.5 201 chr3R 18018885 3` UTR cpo + chr3R 18018986 intergenic cpo +,DNaseII + chr3R 18019086 intergenic cpo +,DNaseII + chr3R_18_18015001 chr3R_18015001 RAL-900_125b 3135 chr3R 18025289 18025359 chr3R 18025420 18025490 19 131 6.0 9.5 7.8 2.2 201 chr3R 18025289 exon CG7794 + chr3R 18025390 intergenic CG7794 + chr3R 18025490 intergenic CG7794 + chr3R_19_18025001 chr3R_18025001 RAL-900_125b 3136 chr3R 18032730 18032805 chr3R 18040453 18040528 opus 27 7723 6.5 6.5 6.5 3.6 7798 chr3R 18032730 intergenic not near genes chr3R 18036629 intergenic not near genes chr3R 18040528 intergenic not near genes chr3R_27_18035001 chr3R_18035001 RAL-900_125b 3137 chr3R 18058359 18058554 chr3R 18058496 18058713 15 150 0.0 0.0 0.0 15.0 354 chr3R 18058359 intergenic not near genes chr3R 18058536 intergenic not near genes chr3R 18058713 intergenic not near genes chr3R_15_18055001 chr3R_18055001 RAL-900_125b 3138 chr3R 18061548 18061601 chr3R 18063166 18063219 F-element 24 1618 10.5 9.0 9.8 2.2 1671 chr3R 18061548 intergenic not near genes chr3R 18062384 intergenic not near genes chr3R 18063219 intergenic not near genes chr3R_24_18060001 chr3R_18060001 RAL-900_125b 3139 chr3R 18067931 18068014 chr3R 18068077 18068146 16 141 0.0 8.0 4.0 3.2 215 chr3R 18067931 intergenic not near genes chr3R 18068038 intergenic not near genes chr3R 18068146 intergenic not near genes chr3R_16_18065001 chr3R_18065001 RAL-900_125b 3140 chr3R 18078106 18078175 chr3R 18078235 18078304 30 129 9.0 9.0 9.0 3.0 198 chr3R 18078106 intergenic not near genes chr3R 18078205 intergenic not near genes chr3R 18078304 intergenic not near genes chr3R_30_18075001 chr3R_18075001 RAL-900_125b 3141 chr3R 18119699 18119749 chr3R 18119826 18119876 10 127 7.5 6.0 6.8 1.3 177 chr3R 18119699 intron sr + chr3R 18119788 intron sr + chr3R 18119876 intron sr + chr3R_10_18115001 chr3R_18115001 RAL-900_125b 3142 chr3R 18122843 18122915 chr3R 18122971 18123042 21 127 8.5 14.0 11.2 1.7 199 chr3R 18122843 intron sr + chr3R 18122942 intron sr + chr3R 18123042 intron sr + chr3R_21_18120001 chr3R_18120001 RAL-900_125b 3143 chr3R 18133929 18133973 chr3R 18134077 18134121 17 148 11.5 15.0 13.2 1.2 192 chr3R 18133929 intergenic sr + chr3R 18134025 intergenic sr + chr3R 18134121 intergenic sr + chr3R_17_18130001 chr3R_18130001 RAL-900_125b 3144 chr3R 18136186 18136222 chr3R 18136350 18136386 8 164 10.5 7.0 8.8 0.8 200 chr3R 18136186 intergenic not near genes chr3R 18136286 intergenic not near genes chr3R 18136386 intergenic not near genes chr3R_8_18135001 chr3R_18135001 RAL-900_125b 3145 chr3R 18215440 18215450 chr3R 18377698 18377708 7 162258 13.0 41.0 27.0 0.2 162268 chr3R 18215440 intergenic CG7985 + chr3R 18296574 intron l(3)05822 - chr3R 18377708 intergenic CG7675 - chr3R_7_18295001 chr3R_18295001 RAL-900_125b 3146 chr3R 18302951 18302955 chr3R 18303106 18303110 4 155 19.0 0.0 9.5 0.4 159 chr3R 18302951 intergenic CG7126 -,PKD - chr3R 18303030 intergenic CG7126 -,PKD - chr3R 18303110 intergenic PKD -,CG7126 - chr3R_4_18300001 chr3R_18300001 RAL-900_125b 3147 chr3R 18328398 18328470 chr3R 18328526 18328583 40 123 8.5 7.5 8.0 4.4 185 chr3R 18328398 intron CG31235 - chr3R 18328490 intron CG31235 - chr3R 18328583 intron CG31235 - chr3R_40_18325001 chr3R_18325001 RAL-900_125b 3148 chr3R 18433975 18434041 chr3R 18434104 18434170 13 129 7.0 0.0 3.5 2.9 195 chr3R 18433975 intron fru - chr3R 18434072 intron fru - chr3R 18434170 intron fru - chr3R_13_18430001 chr3R_18430001 RAL-900_125b 3149 chr3R 18464261 18464333 chr3R 18464449 18464522 22 188 0.0 8.0 4.0 4.4 261 chr3R 18464261 intron fru - chr3R 18464392 intron fru - chr3R 18464522 intron fru - chr3R_22_18460001 chr3R_18460001 RAL-900_125b 3150 chr3R 18472233 18472298 chr3R 18472384 18472449 28 151 6.0 4.5 5.2 4.5 216 chr3R 18472233 intron fru - chr3R 18472341 intron fru - chr3R 18472449 intron fru - chr3R_28_18470001 chr3R_18470001 RAL-900_125b 3151 chr3R 18500698 18500735 chr3R 18500869 18500906 20 170 6.5 17.0 11.8 1.6 208 chr3R 18500698 intron fru - chr3R 18500802 intron fru - chr3R 18500906 intron fru - chr3R_20_18500001 chr3R_18500001 RAL-900_125b 3152 chr3R 18501546 18501620 chr3R 18501677 18501728 25 130 8.0 10.0 9.0 2.5 182 chr3R 18501546 intron fru - chr3R 18501637 intron fru - chr3R 18501728 intron fru - chr3R_25_18500001 chr3R_18500001 RAL-900_125b 3153 chr3R 18505420 18505450 chr3R 18505550 18505580 15 129 4.0 0.0 2.0 5.0 160 chr3R 18505420 intron fru - chr3R 18505500 intron fru - chr3R 18505580 intron fru - chr3R_15_18505001 chr3R_18505001 RAL-900_125b 3154 chr3R 18528322 18528389 chr3R 18528459 18528526 33 137 7.5 6.5 7.0 4.1 204 chr3R 18528322 intron fru - chr3R 18528424 intron fru - chr3R 18528526 intron fru - chr3R_33_18525001 chr3R_18525001 RAL-900_125b 3155 chr3R 18579523 18579540 chr3R 18579651 18579667 5 128 20.0 2.5 11.2 0.4 144 chr3R 18579523 intron,intron CG7694 +,fray + chr3R 18579595 intron,intron CG7694 +,fray + chr3R 18579667 intron,intron CG7694 +,fray + chr3R_5_18575001 chr3R_18575001 RAL-900_125b 3156 chr3R 18606463 18606513 chr3R 18610744 18610795 F-element 15 4281 11.0 11.5 11.2 1.2 4332 chr3R 18606463 intron,intron qin +,CG14304 - chr3R 18608629 intron,intron qin +,CG14304 - chr3R 18610795 intron,intron qin +,CG14304 - chr3R_15_18605001 chr3R_18605001 RAL-900_125b 3157 chr3R 18617691 18617743 chr3R 18617821 18617843 19 128 7.0 17.0 12.0 1.5 152 chr3R 18617691 intron,intron qin +,CG14304 - chr3R 18617767 intron,intron qin +,CG14304 - chr3R 18617843 intron,intron qin +,CG14304 - chr3R_19_18615001 chr3R_18615001 RAL-900_125b 3158 chr3R 18618225 18618297 chr3R 18618360 18618432 21 135 5.0 10.5 7.8 2.4 207 chr3R 18618225 intron,intron qin +,CG14304 - chr3R 18618328 intron,intron qin +,CG14304 - chr3R 18618432 intron,intron qin +,CG14304 - chr3R_21_18615001 chr3R_18615001 RAL-900_125b 3159 chr3R 18670341 18670409 chr3R 18670484 18670552 31 142 7.0 8.5 7.8 3.5 211 chr3R 18670341 intron CG7702 + chr3R 18670446 intron CG7702 + chr3R 18670552 intron CG7702 + chr3R_31_18670001 chr3R_18670001 RAL-900_125b 3160 chr3R 18721008 18721069 chr3R 18721195 18721258 21 187 7.0 3.5 5.2 3.4 250 chr3R 18721008 intron Cha + chr3R 18721133 intron Cha + chr3R 18721258 intron Cha + chr3R_21_18720001 chr3R_18720001 RAL-900_125b 3161 chr3R 18729980 18730035 chr3R 18730105 18730161 21 124 5.0 6.5 5.8 3.1 181 chr3R 18729980 exon Cha + chr3R 18730070 intron Cha + chr3R 18730161 exon Cha + chr3R_21_18730001 chr3R_18730001 RAL-900_125b 3162 chr3R 18781651 18781717 chr3R 18781776 18781843 21 126 11.5 7.0 9.2 2.1 192 chr3R 18781651 intron CG7720 - chr3R 18781747 intron CG7720 - chr3R 18781843 intron CG7720 - chr3R_21_18780001 chr3R_18780001 RAL-900_125b 3163 chr3R 18782713 18782771 chr3R 18782857 18782915 19 144 6.5 12.5 9.5 1.8 202 chr3R 18782713 intron CG7720 - chr3R 18782814 intron CG7720 - chr3R 18782915 intron CG7720 - chr3R_19_18780001 chr3R_18780001 RAL-900_125b 3164 chr3R 18785826 18785891 chr3R 18785953 18786018 25 127 8.5 0.5 4.5 4.5 192 chr3R 18785826 intron CG7720 - chr3R 18785922 intron CG7720 - chr3R 18786018 intron CG7720 - chr3R_25_18785001 chr3R_18785001 RAL-900_125b 3165 chr3R 18791466 18791498 chr3R 18791575 18791590 7 111 13.0 6.5 9.8 0.6 124 chr3R 18791466 intron CG7720 - chr3R 18791528 intron CG7720 - chr3R 18791590 intron CG7720 - chr3R_7_18790001 chr3R_18790001 RAL-900_125b 3166 chr3R 18792768 18792833 chr3R 18792901 18792966 20 133 7.0 0.0 3.5 4.4 198 chr3R 18792768 intron CG7720 - chr3R 18792867 intron CG7720 - chr3R 18792966 intron CG7720 - chr3R_20_18790001 chr3R_18790001 RAL-900_125b 3167 chr3R 18807278 18807314 chr3R 18807405 18807441 12 127 11.5 0.0 5.8 1.8 163 chr3R 18807278 exon CG18208 - chr3R 18807360 intron CG18208 - chr3R 18807441 intron CG18208 - chr3R_12_18805001 chr3R_18805001 RAL-900_125b 3168 chr3R 18808428 18808436 chr3R 18808555 18808563 5 126 23.0 8.5 15.8 0.3 135 chr3R 18808428 intron CG18208 - chr3R 18808496 intron CG18208 - chr3R 18808563 intron CG18208 - chr3R_5_18805001 chr3R_18805001 RAL-900_125b 3169 chr3R 18808443 18808496 chr3R 18808550 18808622 26 117 8.0 9.0 8.5 2.7 179 chr3R 18808443 intron CG18208 - chr3R 18808532 intron CG18208 - chr3R 18808622 intron CG18208 - chr3R_26_18805001 chr3R_18805001 RAL-900_125b 3170 chr3R 18812028 18812106 chr3R 18812156 18812194 20 125 10.0 10.0 10.0 1.8 166 chr3R 18812028 intron CG18208 - chr3R 18812111 intron CG18208 - chr3R 18812194 intron CG18208 - chr3R_20_18810001 chr3R_18810001 RAL-900_125b 3171 chr3R 18887561 18887566 chr3R 18887692 18887696 4 131 16.0 14.0 15.0 0.2 135 chr3R 18887561 intergenic not near genes chr3R 18887628 intergenic not near genes chr3R 18887696 intergenic not near genes chr3R_4_18885001 chr3R_18885001 RAL-900_125b 3172 chr3R 18887570 18887596 chr3R 18887685 18887727 15 124 13.5 13.0 13.2 1.1 157 chr3R 18887570 intergenic not near genes chr3R 18887648 intergenic not near genes chr3R 18887727 intergenic not near genes chr3R_15_18885001 chr3R_18885001 RAL-900_125b 3173 chr3R 18888786 18888856 chr3R 18889171 18889241 31 381 10.0 11.0 10.5 2.7 455 chr3R 18888786 intergenic not near genes chr3R 18889014 intergenic not near genes chr3R 18889241 intergenic not near genes chr3R_31_18885001 chr3R_18885001 RAL-900_125b 3174 chr3R 18891218 18891286 chr3R 18891392 18891462 36 174 9.0 9.0 9.0 3.6 244 chr3R 18891218 intergenic not near genes chr3R 18891340 intergenic not near genes chr3R 18891462 intergenic not near genes chr3R_36_18890001 chr3R_18890001 RAL-900_125b 3175 chr3R 18934399 18934438 chr3R 18934524 18934567 roo 10 123 3.5 11.0 7.2 1.2 168 chr3R 18934399 intron CG42613 + chr3R 18934483 intron CG42613 + chr3R 18934567 intron CG42613 + chr3R_10_18930001 chr3R_18930001 RAL-900_125b 3176 chr3R 18960049 18960122 chr3R 18960187 18960263 31 138 9.5 6.0 7.8 3.5 214 chr3R 18960049 intron,intron CG42613 +,CG43732 + chr3R 18960156 intron,intron CG42613 +,CG43732 + chr3R 18960263 intron,intron CG42613 +,CG43732 + chr3R_31_18960001 chr3R_18960001 RAL-900_125b 3177 chr3R 19014050 19014117 chr3R 19014180 19014230 27 127 12.0 5.0 8.5 2.8 180 chr3R 19014050 intron gukh + chr3R 19014140 intron gukh + chr3R 19014230 intron gukh + chr3R_27_19010001 chr3R_19010001 RAL-900_125b 3178 chr3R 19079524 19079600 chr3R 19079659 19079683 22 129 9.0 6.5 7.8 2.5 159 chr3R 19079524 intron cdi - chr3R 19079604 intron cdi - chr3R 19079683 intron cdi - chr3R_22_19075001 chr3R_19075001 RAL-900_125b 3179 chr3R 19109182 19109211 chr3R 19109344 19109366 10 160 9.0 8.0 8.5 1.1 184 chr3R 19109182 intron CG6040 + chr3R 19109274 intron CG6040 + chr3R 19109366 intron CG6040 + chr3R_10_19105001 chr3R_19105001 RAL-900_125b 3180 chr3R 19109213 19109251 chr3R 19109340 19109406 8 149 3.5 7.5 5.5 1.2 193 chr3R 19109213 intron CG6040 + chr3R 19109310 intron CG6040 + chr3R 19109406 intron CG6040 + chr3R_8_19105001 chr3R_19105001 RAL-900_125b 3181 chr3R 19117016 19117020 chr3R 19117210 19117214 5 194 21.5 0.0 10.8 0.4 198 chr3R 19117016 intron CG6040 + chr3R 19117115 intron CG6040 + chr3R 19117214 intron CG6040 + chr3R_5_19115001 chr3R_19115001 RAL-900_125b 3182 chr3R 19128826 19128836 chr3R 19129010 19129020 5 184 0.0 6.5 3.2 1.2 194 chr3R 19128826 intron CG6040 + chr3R 19128923 intron CG6040 + chr3R 19129020 intron CG6040 + chr3R_5_19125001 chr3R_19125001 RAL-900_125b 3183 chr3R 19159923 19159961 chr3R 19160052 19160090 14 129 12.0 11.5 11.8 1.1 167 chr3R 19159923 3` UTR nos + chr3R 19160006 3` UTR nos + chr3R 19160090 3` UTR nos + chr3R_14_19160001 chr3R_19160001 RAL-900_125b 3184 chr3R 19192915 19192946 chr3R 19197279 19197301 F-element 8 4360 7.5 10.5 9.0 0.8 4386 chr3R 19192915 intron CG31475 + chr3R 19195108 intron CG31475 + chr3R 19197301 intron CG31475 + chr3R_8_19195001 chr3R_19195001 RAL-900_125b 3185 chr3R 19223903 19223906 chr3R 19224033 19224036 4 130 0.0 12.5 6.2 0.6 133 chr3R 19223903 intron vib - chr3R 19223970 intron vib - chr3R 19224036 intron vib - chr3R_4_19220001 chr3R_19220001 RAL-900_125b 3186 chr3R 19227829 19227862 chr3R 19230310 19230318 4 2466 40.5 50.5 45.5 0.1 2489 chr3R 19227829 exon CG11703 - chr3R 19229074 exon CG5250 - chr3R 19230318 exon CG3773 + chr3R_4_19225001 chr3R_19225001 RAL-900_125b 3187 chr3R 19227827 19227889 chr3R 19230323 19230360 22 2475 51.5 49.0 50.2 0.4 2533 chr3R 19227827 exon CG11703 - chr3R 19229094 exon CG5250 - chr3R 19230360 exon CG3773 + chr3R_22_19225001 chr3R_19225001 RAL-900_125b 3188 chr3R 19248867 19248904 chr3R 19248962 19249044 8 128 7.5 0.0 3.8 1.7 177 chr3R 19248867 intergenic not near genes chr3R 19248956 intergenic not near genes chr3R 19249044 intergenic not near genes chr3R_8_19245001 chr3R_19245001 RAL-900_125b 3189 chr3R 19276891 19276948 chr3R 19277021 19277078 23 130 5.5 0.0 2.8 6.1 187 chr3R 19276891 intergenic not near genes chr3R 19276984 intergenic not near genes chr3R 19277078 intergenic not near genes chr3R_23_19275001 chr3R_19275001 RAL-900_125b 3190 chr3R 19290496 19290573 chr3R 19290622 19290698 46 124 7.5 10.5 9.0 4.6 202 chr3R 19290496 intergenic not near genes chr3R 19290597 intergenic not near genes chr3R 19290698 intergenic not near genes chr3R_46_19290001 chr3R_19290001 RAL-900_125b 3191 chr3R 19340359 19340420 chr3R 19340486 19340547 30 127 10.0 11.0 10.5 2.6 188 chr3R 19340359 intergenic not near genes chr3R 19340453 intergenic not near genes chr3R 19340547 intergenic not near genes chr3R_30_19340001 chr3R_19340001 RAL-900_125b 3192 chr3R 19344626 19344691 chr3R 19344811 19344876 33 185 8.5 8.0 8.2 3.6 250 chr3R 19344626 intergenic not near genes chr3R 19344751 intergenic not near genes chr3R 19344876 intergenic not near genes chr3R_33_19340001 chr3R_19340001 RAL-900_125b 3193 chr3R 19364385 19364446 chr3R 19364585 19364646 27 200 7.0 8.0 7.5 3.2 261 chr3R 19364385 intergenic not near genes chr3R 19364516 intergenic not near genes chr3R 19364646 intergenic not near genes chr3R_27_19360001 chr3R_19360001 RAL-900_125b 3194 chr3R 19377376 19377443 chr3R 19377508 19377575 17 124 9.0 9.0 9.0 1.7 199 chr3R 19377376 intron Ino80 - chr3R 19377476 intron Ino80 - chr3R 19377575 intron Ino80 - chr3R_17_19375001 chr3R_19375001 RAL-900_125b 3195 chr3R 19394488 19394505 chr3R 19394647 19394664 10 159 20.0 7.5 13.8 0.7 176 chr3R 19394488 intron,exon Ino80 -,CG3739 + chr3R 19394576 intron,exon Ino80 -,CG3739 + chr3R 19394664 intron,intron Ino80 -,CG3739 + chr3R_10_19390001 chr3R_19390001 RAL-900_125b 3196 chr3R 19394507 19394565 chr3R 19394646 19394724 24 156 10.0 7.5 8.8 2.4 217 chr3R 19394507 intron,exon Ino80 -,CG3739 + chr3R 19394616 intron,intron Ino80 -,CG3739 + chr3R 19394724 intron,exon Ino80 -,CG3739 + chr3R_24_19390001 chr3R_19390001 RAL-900_125b 3197 chr3R 19417501 19417558 chr3R 19417638 19417706 14 139 2.0 6.0 4.0 2.8 205 chr3R 19417501 intron CG31221 + chr3R 19417604 intron CG31221 + chr3R 19417706 intron CG31221 + chr3R_14_19415001 chr3R_19415001 RAL-900_125b 3198 chr3R 19418369 19418424 chr3R 19418511 19418566 21 142 10.5 0.0 5.2 3.4 197 chr3R 19418369 intron CG31221 + chr3R 19418468 intron CG31221 + chr3R 19418566 intron CG31221 + chr3R_21_19415001 chr3R_19415001 RAL-900_125b 3199 chr3R 19430140 19430205 chr3R 19430322 19430387 33 181 7.5 7.0 7.2 4.0 247 chr3R 19430140 intron CG31221 + chr3R 19430264 intron CG31221 + chr3R 19430387 intron CG31221 + chr3R_33_19430001 chr3R_19430001 RAL-900_125b 3200 chr3R 19559431 19559508 chr3R 19559559 19559636 21 123 7.5 5.5 6.5 2.8 205 chr3R 19559431 intron Dys + chr3R 19559534 intron Dys + chr3R 19559636 intron Dys + chr3R_21_19555001 chr3R_19555001 RAL-900_125b 3201 chr3R 19567500 19567574 chr3R 19567631 19567710 30 134 4.5 0.0 2.2 9.4 210 chr3R 19567500 intron Dys + chr3R 19567605 intron Dys + chr3R 19567710 intron Dys + chr3R_30_19565001 chr3R_19565001 RAL-900_125b 3202 chr3R 19570568 19570648 chr3R 19570786 19570866 24 217 0.0 11.0 5.5 3.7 298 chr3R 19570568 intron Dys + chr3R 19570717 intron Dys + chr3R 19570866 intron Dys + chr3R_24_19570001 chr3R_19570001 RAL-900_125b 3203 chr3R 19602726 19602782 chr3R 19602848 19602910 24 128 11.5 10.0 10.8 2.0 184 chr3R 19602726 intergenic CG7333 + chr3R 19602818 intergenic CG7333 + chr3R 19602910 intergenic CG7333 +,CG7342 + chr3R_24_19600001 chr3R_19600001 RAL-900_125b 3204 chr3R 19622943 19622974 chr3R 19623095 19623141 8 153 6.0 9.0 7.5 0.9 198 chr3R 19622943 intron CG6231 - chr3R 19623042 intron CG6231 - chr3R 19623141 intron CG6231 - chr3R_8_19620001 chr3R_19620001 RAL-900_125b 3205 chr3R 19633265 19633294 chr3R 19633401 19633430 13 136 7.5 16.0 11.8 1.0 165 chr3R 19633265 intergenic subdued - chr3R 19633348 intergenic subdued - chr3R 19633430 3` UTR subdued - chr3R_13_19630001 chr3R_19630001 RAL-900_125b 3206 chr3R 19633295 19633320 chr3R 19633390 19633456 7 128 5.0 14.0 9.5 0.7 161 chr3R 19633295 intergenic subdued - chr3R 19633376 intergenic subdued - chr3R 19633456 3` UTR subdued - chr3R_7_19630001 chr3R_19630001 RAL-900_125b 3207 chr3R 19651679 19651755 chr3R 19651805 19651881 42 124 7.0 11.5 9.2 4.1 202 chr3R 19651679 exon CG31219 + chr3R 19651780 exon CG31219 + chr3R 19651881 intron CG31219 + chr3R_42_19650001 chr3R_19650001 RAL-900_125b 3208 chr3R 19702276 19702350 chr3R 19702408 19702482 32 130 7.0 6.5 6.8 4.1 206 chr3R 19702276 intergenic not near genes chr3R 19702379 intergenic not near genes chr3R 19702482 intergenic not near genes chr3R_32_19700001 chr3R_19700001 RAL-900_125b 3209 chr3R 19733978 19734011 chr3R 19734106 19734139 17 128 5.5 19.5 12.5 1.3 161 chr3R 19733978 intron GluClalpha + chr3R 19734058 intron GluClalpha + chr3R 19734139 intron GluClalpha + chr3R_17_19730001 chr3R_19730001 RAL-900_125b 3210 chr3R 19777702 19777707 chr3R 19778018 19778023 6 316 17.0 11.0 14.0 0.4 321 chr3R 19777702 intergenic CG11659 - chr3R 19777862 intergenic not near genes chr3R 19778023 intergenic not near genes chr3R_6_19775001 chr3R_19775001 RAL-900_125b 3211 chr3R 19777708 19777762 chr3R 19778009 19778078 29 315 9.0 10.0 9.5 2.8 370 chr3R 19777708 intergenic CG11659 - chr3R 19777893 intergenic not near genes chr3R 19778078 intergenic not near genes chr3R_29_19775001 chr3R_19775001 RAL-900_125b 3212 chr3R 19830834 19830882 chr3R 19830961 19831009 15 126 0.0 6.0 3.0 3.8 175 chr3R 19830834 intron bnl - chr3R 19830922 intron bnl - chr3R 19831009 intron bnl - chr3R_15_19830001 chr3R_19830001 RAL-900_125b 3213 chr3R 20004955 20005020 chr3R 20005097 20005118 25 129 5.0 12.0 8.5 2.6 163 chr3R 20004955 intron Hs6st - chr3R 20005036 intron Hs6st - chr3R 20005118 intron Hs6st - chr3R_25_20005001 chr3R_20005001 RAL-900_125b 3214 chr3R 20008778 20008843 chr3R 20008909 20008974 37 130 7.0 9.0 8.0 4.1 196 chr3R 20008778 intergenic MED25 +,Hs6st - chr3R 20008876 intergenic MED25 +,Hs6st - chr3R 20008974 5` UTR MED25 + chr3R_37_20005001 chr3R_20005001 RAL-900_125b 3215 chr3R 20041080 20041107 chr3R 20041225 20041259 12 150 14.0 8.0 11.0 1.0 179 chr3R 20041080 intron CG17193 - chr3R 20041170 intron CG17193 - chr3R 20041259 intron CG17193 - chr3R_12_20040001 chr3R_20040001 RAL-900_125b 3216 chr3R 20041115 20041138 chr3R 20041221 20041290 11 147 9.0 7.5 8.2 1.2 175 chr3R 20041115 intron CG17193 - chr3R 20041202 intron CG17193 - chr3R 20041290 intron CG17193 - chr3R_11_20040001 chr3R_20040001 RAL-900_125b 3217 chr3R 20076987 20077068 chr3R 20077123 20077128 26 132 4.0 6.5 5.2 4.2 141 chr3R 20076987 intergenic not near genes chr3R 20077058 intergenic not near genes chr3R 20077128 intergenic not near genes chr3R_26_20075001 chr3R_20075001 RAL-900_125b 3218 chr3R 20087131 20087155 chr3R 20087275 20087299 13 144 6.5 0.0 3.2 3.1 168 chr3R 20087131 intergenic not near genes chr3R 20087215 intergenic not near genes chr3R 20087299 intergenic not near genes chr3R_13_20085001 chr3R_20085001 RAL-900_125b 3219 chr3R 20109494 20109559 chr3R 20114750 20114815 copia 28 5256 8.0 10.5 9.2 2.7 5321 chr3R 20109494 intergenic not near genes chr3R 20112154 intergenic not near genes chr3R 20114815 intergenic CG10887 + chr3R_28_20110001 chr3R_20110001 RAL-900_125b 3220 chr3R 20124523 20124595 chr3R 20124660 20124732 28 136 11.5 9.5 10.5 2.4 209 chr3R 20124523 intergenic not near genes chr3R 20124628 intergenic not near genes chr3R 20124732 intergenic not near genes chr3R_28_20120001 chr3R_20120001 RAL-900_125b 3221 chr3R 20146265 20146346 chr3R 20146636 20146718 27 369 6.0 6.0 6.0 3.9 453 chr3R 20146265 intergenic not near genes chr3R 20146492 intergenic not near genes chr3R 20146718 intergenic not near genes chr3R_27_20145001 chr3R_20145001 RAL-900_125b 3222 chr3R 20156652 20156715 chr3R 20165872 20165935 roo 35 9218 7.5 8.5 8.0 3.9 9283 chr3R 20156652 intergenic not near genes chr3R 20161294 intergenic not near genes chr3R 20165935 intergenic not near genes chr3R_35_20160001 chr3R_20160001 RAL-900_125b 3223 chr3R 20193435 20193470 chr3R 20193574 20193609 10 139 7.5 10.0 8.8 1.0 174 chr3R 20193435 intergenic not near genes chr3R 20193522 intergenic not near genes chr3R 20193609 intergenic not near genes chr3R_10_20190001 chr3R_20190001 RAL-900_125b 3224 chr3R 20205520 20205594 chr3R 20205692 20205766 28 172 4.5 8.0 6.2 3.9 246 chr3R 20205520 intron Nlg4 + chr3R 20205643 intron Nlg4 + chr3R 20205766 intron Nlg4 + chr3R_28_20205001 chr3R_20205001 RAL-900_125b 3225 chr3R 20205886 20205930 chr3R 20206020 20206064 11 134 2.0 0.5 1.2 5.0 178 chr3R 20205886 intron Nlg4 + chr3R 20205975 intron Nlg4 + chr3R 20206064 intron Nlg4 + chr3R_11_20205001 chr3R_20205001 RAL-900_125b 3226 chr3R 20222505 20222573 chr3R 20222771 20222792 28 261 10.5 9.5 10.0 2.5 287 chr3R 20222505 intron Nlg4 + chr3R 20222648 intron Nlg4 + chr3R 20222792 intron Nlg4 + chr3R_28_20220001 chr3R_20220001 RAL-900_125b 3227 chr3R 20231454 20231521 chr3R 20231588 20231650 31 129 67.0 54.0 60.5 0.5 196 chr3R 20231454 intron Nlg4 + chr3R 20231552 intron Nlg4 + chr3R 20231650 intron Nlg4 + chr3R_31_20230001 chr3R_20230001 RAL-900_125b 3228 chr3R 20245236 20245295 chr3R 20248896 20248955 F-element 24 3660 15.5 0.5 8.0 2.7 3719 chr3R 20245236 3` UTR Nlg4 + chr3R 20247096 intergenic not near genes chr3R 20248955 intergenic not near genes chr3R_24_20245001 chr3R_20245001 RAL-900_125b 3229 chr3R 20256789 20256858 chr3R 20256915 20256986 19 127 0.5 8.5 4.5 3.5 197 chr3R 20256789 intron cic + chr3R 20256888 intron cic + chr3R 20256986 intron cic + chr3R_19_20255001 chr3R_20255001 RAL-900_125b 3230 chr3R 20266471 20266534 chr3R 20272992 20273055 Burdock 36 6521 8.0 8.0 8.0 4.0 6584 chr3R 20266471 intron cic + chr3R 20269763 intron cic + chr3R 20273055 intron cic + chr3R_36_20265001 chr3R_20265001 RAL-900_125b 3231 chr3R 20282227 20282301 chr3R 20282353 20282427 30 126 2.0 8.0 5.0 5.0 200 chr3R 20282227 intron cic + chr3R 20282327 intron cic + chr3R 20282427 intron cic + chr3R_30_20280001 chr3R_20280001 RAL-900_125b 3232 chr3R 20308944 20309003 chr3R 20309070 20309126 8 115 10.0 14.0 12.0 0.6 182 chr3R 20308944 intergenic CG42668 + chr3R 20309035 intergenic CG42668 + chr3R 20309126 intergenic CG42668 + chr3R_8_20305001 chr3R_20305001 RAL-900_125b 3233 chr3R 20330956 20331023 chr3R 20331492 20331559 roo 38 536 9.5 14.0 11.8 3.0 603 chr3R 20330956 intergenic Sirt2 + chr3R 20331258 intergenic Sirt2 + chr3R 20331559 intergenic not near genes chr3R_38_20330001 chr3R_20330001 RAL-900_125b 3234 chr3R 20350157 20350234 chr3R 20350288 20350365 26 129 7.5 9.0 8.2 2.8 208 chr3R 20350157 intergenic not near genes chr3R 20350261 intergenic not near genes chr3R 20350365 intergenic not near genes chr3R_26_20350001 chr3R_20350001 RAL-900_125b 3235 chr3R 20391744 20391768 chr3R 20391860 20391914 13 140 3.0 6.5 4.8 2.2 170 chr3R 20391744 intron Gfrl - chr3R 20391829 intron Gfrl - chr3R 20391914 intron Gfrl - chr3R_13_20390001 chr3R_20390001 RAL-900_125b 3236 chr3R 20394781 20394820 chr3R 20394907 20394946 14 123 7.0 5.5 6.2 1.9 165 chr3R 20394781 intron Gfrl - chr3R 20394864 intron Gfrl - chr3R 20394946 intron Gfrl - chr3R_14_20390001 chr3R_20390001 RAL-900_125b 3237 chr3R 20433053 20433122 chr3R 20433194 20433262 40 140 8.0 10.0 9.0 4.0 209 chr3R 20433053 intron Gfrl - chr3R 20433158 intron Gfrl - chr3R 20433262 intron Gfrl - chr3R_40_20430001 chr3R_20430001 RAL-900_125b 3238 chr3R 20467038 20467070 chr3R 20467164 20467196 9 122 15.0 6.5 10.8 0.8 158 chr3R 20467038 intron Gfrl - chr3R 20467117 intron Gfrl - chr3R 20467196 intron Gfrl - chr3R_9_20465001 chr3R_20465001 RAL-900_125b 3239 chr3R 20467079 20467113 chr3R 20467160 20467203 11 102 8.0 7.0 7.5 1.3 124 chr3R 20467079 intron Gfrl - chr3R 20467141 intron Gfrl - chr3R 20467203 intron Gfrl - chr3R_11_20465001 chr3R_20465001 RAL-900_125b 3240 chr3R 20483279 20483289 chr3R 20483414 20483424 5 135 10.0 8.0 9.0 0.5 145 chr3R 20483279 intron Gfrl - chr3R 20483352 intron Gfrl - chr3R 20483424 intron Gfrl - chr3R_5_20480001 chr3R_20480001 RAL-900_125b 3241 chr3R 20498469 20498549 chr3R 20498612 20498692 14 143 6.0 0.0 3.0 3.5 223 chr3R 20498469 intergenic not near genes chr3R 20498580 intergenic not near genes chr3R 20498692 intergenic not near genes chr3R_14_20495001 chr3R_20495001 RAL-900_125b 3242 chr3R 20506525 20506608 chr3R 20507389 20507461 BS 21 855 0.0 10.5 5.2 3.4 936 chr3R 20506525 intergenic Or92a + chr3R 20506993 intergenic CG4288 - chr3R 20507461 3` UTR CG4288 - chr3R_21_20505001 chr3R_20505001 RAL-900_125b 3243 chr3R 20512957 20513021 chr3R 20515710 20515774 opus 15 2753 9.5 0.0 4.8 2.6 2817 chr3R 20512957 intergenic CG4288 - chr3R 20514366 intergenic not near genes chr3R 20515774 intergenic not near genes chr3R_15_20510001 chr3R_20510001 RAL-900_125b 3244 chr3R 4475346 4475349 chr3R 20516599 20516602 micropia 5 16041253 37.5 20.5 29.0 0.2 16041256 chr3R 4475346 intron CG31523 - chr3R 12495974 intergenic not near genes chr3R 20516602 intergenic not near genes chr3R_5_12495001 chr3R_12495001 RAL-900_125b 3245 chr3R 20594438 20594510 chr3R 20594578 20594654 31 140 4.5 0.0 2.2 9.7 216 chr3R 20594438 intron bon + chr3R 20594546 intron bon + chr3R 20594654 intron bon + chr3R_31_20590001 chr3R_20590001 RAL-900_125b 3246 chr3R 20596145 20596211 chr3R 20596282 20596348 30 137 8.0 10.0 9.0 3.0 203 chr3R 20596145 intron bon + chr3R 20596246 intron bon + chr3R 20596348 intron bon + chr3R_30_20595001 chr3R_20595001 RAL-900_125b 3247 chr3R 20613143 20613147 chr3R 20613276 20613280 INE-1 4 133 18.0 12.5 15.2 0.2 137 chr3R 20613143 intron CG15923 - chr3R 20613212 intron CG15923 - chr3R 20613280 intron CG15923 - chr3R_4_20610001 chr3R_20610001 RAL-900_125b 3248 chr3R 20617450 20617520 chr3R 20617770 20617839 17 320 5.0 4.0 4.5 3.1 389 chr3R 20617450 intergenic CG5466 + chr3R 20617644 intergenic CG5466 + chr3R 20617839 intergenic CG5466 + chr3R_17_20615001 chr3R_20615001 RAL-900_125b 3249 chr3R 20717048 20717110 chr3R 20717181 20717243 23 124 10.0 7.0 8.5 2.4 195 chr3R 20717048 intergenic not near genes chr3R 20717146 intergenic not near genes chr3R 20717243 intergenic not near genes chr3R_23_20715001 chr3R_20715001 RAL-900_125b 3250 chr3R 20730893 20731046 chr3R 20731034 20731186 17 138 0.0 0.0 0.0 17.0 293 chr3R 20730893 intergenic not near genes chr3R 20731040 intergenic not near genes chr3R 20731186 intergenic CG31205 + chr3R_17_20730001 chr3R_20730001 RAL-900_125b 3251 chr3R 20787393 20787458 chr3R 20787533 20787599 30 140 6.5 10.0 8.2 3.3 206 chr3R 20787393 intron Syp + chr3R 20787496 intron Syp + chr3R 20787599 intron Syp + chr3R_30_20785001 chr3R_20785001 RAL-900_125b 3252 chr3R 20848300 20848356 chr3R 20848440 20848496 13 140 0.5 12.5 6.5 1.7 196 chr3R 20848300 intergenic not near genes chr3R 20848398 intergenic not near genes chr3R 20848496 intergenic not near genes chr3R_13_20845001 chr3R_20845001 RAL-900_125b 3253 chr3R 20850046 20850110 chr3R 20850181 20850245 22 135 0.0 15.0 7.5 2.6 199 chr3R 20850046 intergenic RpS30 + chr3R 20850146 intergenic RpS30 + chr3R 20850245 intergenic RpS30 + chr3R_22_20850001 chr3R_20850001 RAL-900_125b 3254 chr3R 20854430 20854506 chr3R 20859275 20859346 Doc 16 4841 6.0 8.0 7.0 2.0 4916 chr3R 20854430 intron Ir93a - chr3R 20856888 intron Ir93a - chr3R 20859346 exon Ir93a - chr3R_16_20855001 chr3R_20855001 RAL-900_125b 3255 chr3R 20870204 20870278 chr3R 20870338 20870413 34 134 3.0 6.5 4.8 5.9 209 chr3R 20870204 intergenic not near genes chr3R 20870308 intergenic not near genes chr3R 20870413 intergenic not near genes chr3R_34_20870001 chr3R_20870001 RAL-900_125b 3256 chr3R 20875927 20875984 chr3R 20876055 20876101 19 124 12.0 13.0 12.5 1.4 174 chr3R 20875927 intergenic not near genes chr3R 20876014 intergenic not near genes chr3R 20876101 intergenic not near genes chr3R_19_20875001 chr3R_20875001 RAL-900_125b 3257 chr3R 20942779 20942831 chr3R 20942900 20942946 8 120 8.5 15.5 12.0 0.6 167 chr3R 20942779 intron CG31191 - chr3R 20942862 intron CG31191 - chr3R 20942946 intron CG31191 - chr3R_8_20940001 chr3R_20940001 RAL-900_125b 3258 chr3R 20972629 20972692 chr3R 20972757 20972820 20 128 11.5 8.0 9.8 1.9 191 chr3R 20972629 intron Atpalpha + chr3R 20972724 intron Atpalpha + chr3R 20972820 intron Atpalpha + chr3R_20_20970001 chr3R_20970001 RAL-900_125b 3259 chr3R 20997959 20998018 chr3R 20998099 20998158 17 140 0.0 9.0 4.5 3.1 199 chr3R 20997959 intron Calx + chr3R 20998058 intron Calx + chr3R 20998158 intron Calx + chr3R_17_20995001 chr3R_20995001 RAL-900_125b 3260 chr3R 20998853 20998921 chr3R 20999275 20999343 28 418 8.5 11.0 9.8 2.6 490 chr3R 20998853 intron Calx + chr3R 20999098 intron Calx + chr3R 20999343 intron Calx + chr3R_28_20995001 chr3R_20995001 RAL-900_125b 3261 chr3R 21020353 21020425 chr3R 21020479 21020542 29 126 11.0 10.5 10.8 2.5 189 chr3R 21020353 3` UTR Rlip + chr3R 21020448 3` UTR Rlip + chr3R 21020542 3` UTR Rlip + chr3R_29_21020001 chr3R_21020001 RAL-900_125b 3262 chr3R 21108013 21108066 chr3R 21108324 21108377 18 311 7.0 10.5 8.8 1.8 364 chr3R 21108013 intergenic Sec15 -,rtet + chr3R 21108195 intergenic Sec15 -,rtet + chr3R 21108377 intergenic rtet +,Sec15 - chr3R_18_21105001 chr3R_21105001 RAL-900_125b 3263 chr3R 21118907 21118936 chr3R 21119064 21119081 INE-1 12 156 17.0 7.5 12.2 0.9 174 chr3R 21118907 intergenic Bdbt -,slmb - chr3R 21118994 intergenic Bdbt -,slmb - chr3R 21119081 intergenic slmb -,Bdbt - chr3R_12_21115001 chr3R_21115001 RAL-900_125b 3264 chr3R 21141630 21141638 chr3R 21150161 21150169 Tirant 7 8531 18.5 4.5 11.5 0.6 8539 chr3R 21141630 intron SNF4Agamma + chr3R 21145900 intron SNF4Agamma + chr3R 21150169 intron SNF4Agamma + chr3R_7_21145001 chr3R_21145001 RAL-900_125b 3265 chr3R 21141639 21141707 chr3R 21150159 21150217 Tirant 13 8520 7.0 4.5 5.8 1.9 8578 chr3R 21141639 intron SNF4Agamma + chr3R 21145928 intron SNF4Agamma + chr3R 21150217 intron SNF4Agamma + chr3R_13_21145001 chr3R_21145001 RAL-900_125b 3266 chr3R 21214694 21214766 chr3R 21214916 21214988 24 221 7.5 7.0 7.2 2.9 294 chr3R 21214694 intergenic CG5862 + chr3R 21214841 intergenic CG5862 + chr3R 21214988 intergenic CG5862 + chr3R_24_21210001 chr3R_21210001 RAL-900_125b 3267 chr3R 21245806 21245866 chr3R 21245940 21246000 29 134 9.0 11.5 10.2 2.6 194 chr3R 21245806 intergenic CG5892 + chr3R 21245903 intergenic CG5892 + chr3R 21246000 intergenic not near genes chr3R_29_21245001 chr3R_21245001 RAL-900_125b 3268 chr3R 21265435 21265507 chr3R 21265719 21265790 17 284 5.0 5.0 5.0 2.8 355 chr3R 21265435 intergenic ETHR + chr3R 21265612 intergenic Rab1 -,ETHR + chr3R 21265790 intergenic Rab1 - chr3R_17_21265001 chr3R_21265001 RAL-900_125b 3269 chr3R 21322926 21323004 chr3R 21323054 21323136 19 128 4.5 5.5 5.0 3.2 210 chr3R 21322926 exon CG16791 - chr3R 21323031 intron CG16791 - chr3R 21323136 intron CG16791 - chr3R_19_21320001 chr3R_21320001 RAL-900_125b 3270 chr3R 21330758 21330763 chr3R 21330898 21330903 5 140 20.0 9.5 14.8 0.3 145 chr3R 21330758 intron CG16791 - chr3R 21330830 intron CG16791 - chr3R 21330903 intron CG16791 - chr3R_5_21330001 chr3R_21330001 RAL-900_125b 3271 chr3R 21330764 21330826 chr3R 21330888 21330966 31 138 8.0 8.0 8.0 3.4 202 chr3R 21330764 intron CG16791 - chr3R 21330865 intron CG16791 - chr3R 21330966 intron CG16791 - chr3R_31_21330001 chr3R_21330001 RAL-900_125b 3272 chr3R 21383223 21383297 chr3R 21383358 21383427 13 130 0.0 0.0 0.0 13.0 204 chr3R 21383223 intergenic not near genes chr3R 21383325 intergenic not near genes chr3R 21383427 intergenic not near genes chr3R_13_21380001 chr3R_21380001 RAL-900_125b 3273 chr3R 21385647 21385680 chr3R 21385779 21385812 5 130 12.5 0.0 6.2 0.7 165 chr3R 21385647 intergenic not near genes chr3R 21385730 intergenic not near genes chr3R 21385812 intergenic not near genes chr3R_5_21385001 chr3R_21385001 RAL-900_125b 3274 chr3R 21385706 21385947 chr3R 21385774 21386073 37 124 9.5 1.0 5.2 6.0 367 chr3R 21385706 intergenic not near genes chr3R 21385890 intergenic not near genes chr3R 21386073 intergenic not near genes chr3R_37_21385001 chr3R_21385001 RAL-900_125b 3275 chr3R 21385947 21385959 chr3R 21386074 21386086 8 126 8.0 7.5 7.8 0.9 139 chr3R 21385947 intergenic not near genes chr3R 21386016 intergenic not near genes chr3R 21386086 intergenic not near genes chr3R_8_21385001 chr3R_21385001 RAL-900_125b 3276 chr3R 21460991 21461007 chr3R 21461131 21461147 7 140 7.0 0.0 3.5 1.6 156 chr3R 21460991 intergenic not near genes chr3R 21461069 intergenic not near genes chr3R 21461147 intergenic not near genes chr3R_7_21460001 chr3R_21460001 RAL-900_125b 3277 chr3R 21464353 21464410 chr3R 21464489 21464544 9 135 9.5 4.5 7.0 1.1 191 chr3R 21464353 intergenic not near genes chr3R 21464448 intergenic not near genes chr3R 21464544 intergenic not near genes chr3R_9_21460001 chr3R_21460001 RAL-900_125b 3278 chr3R 21471975 21472032 chr3R 21472106 21472133 18 128 10.0 13.5 11.8 1.4 158 chr3R 21471975 intergenic not near genes chr3R 21472054 intergenic not near genes chr3R 21472133 intergenic not near genes chr3R_18_21470001 chr3R_21470001 RAL-900_125b 3279 chr3R 21475944 21476020 chr3R 21476082 21476158 33 134 6.0 7.0 6.5 4.4 214 chr3R 21475944 intergenic not near genes chr3R 21476051 intergenic not near genes chr3R 21476158 intergenic not near genes chr3R_33_21475001 chr3R_21475001 RAL-900_125b 3280 chr3R 21479000 21479051 chr3R 21479351 21479402 25 350 7.5 10.0 8.8 2.6 402 chr3R 21479000 intergenic not near genes chr3R 21479201 intergenic not near genes chr3R 21479402 intergenic not near genes chr3R_25_21475001 chr3R_21475001 RAL-900_125b 3281 chr3R 21506823 21506910 chr3R 21506959 21507040 30 135 7.0 8.5 7.8 3.4 217 chr3R 21506823 intron C15 + chr3R 21506932 intron C15 + chr3R 21507040 intron C15 + chr3R_30_21505001 chr3R_21505001 RAL-900_125b 3282 chr3R 21532733 21532864 chr3R 21532863 21532999 6 137 0.0 0.0 0.0 6.0 266 chr3R 21532733 3` UTR CR43372 - chr3R 21532866 intron CR43372 - chr3R 21532999 intergenic CR43372 - chr3R_6_21530001 chr3R_21530001 RAL-900_125b 3283 chr3R 21587835 21587901 chr3R 21587962 21588028 24 126 11.5 12.0 11.8 1.9 193 chr3R 21587835 intron InR - chr3R 21587932 intron InR - chr3R 21588028 intron InR - chr3R_24_21585001 chr3R_21585001 RAL-900_125b 3284 chr3R 21672682 21672728 chr3R 21672817 21672863 20 135 7.0 17.0 12.0 1.5 181 chr3R 21672682 3` UTR CG31176 - chr3R 21672772 3` UTR CG31176 - chr3R 21672863 3` UTR CG31176 - chr3R_20_21670001 chr3R_21670001 RAL-900_125b 3285 chr3R 21733942 21733955 chr3R 21734095 21734108 4 153 1.5 8.5 5.0 0.7 166 chr3R 21733942 intergenic not near genes chr3R 21734025 intergenic not near genes chr3R 21734108 intergenic not near genes chr3R_4_21730001 chr3R_21730001 RAL-900_125b 3286 chr3R 21761090 21761150 chr3R 21768521 21768592 mdg1 28 7439 10.5 6.0 8.2 3.0 7502 chr3R 21761090 exon CG42335 + chr3R 21764841 intron CG42335 + chr3R 21768592 exon CG42335 + chr3R_28_21760001 chr3R_21760001 RAL-900_125b 3287 chr3R 21903613 21903634 chr3R 21903760 21903781 13 147 0.0 12.0 6.0 1.9 168 chr3R 21903613 intron CG6678 + chr3R 21903697 intron CG6678 + chr3R 21903781 intron CG6678 + chr3R_13_21900001 chr3R_21900001 RAL-900_125b 3288 chr3R 21907534 21907534 chr3R 28831799 28831802 16 6924268 35.0 36.5 35.8 0.4 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_16_25365001 chr3R_25365001 RAL-900_125b 3289 chr3R 8339246 8339247 chr3R 21907535 21907535 6 13568288 36.5 33.5 35.0 0.2 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_6_15120001 chr3R_15120001 RAL-900_125b 3290 chr3R 9620956 9620956 chr3R 21907535 21907535 9 12286579 35.5 33.5 34.5 0.3 12286579 chr3R 9620956 intron CG8312 + chr3R 15764246 intergenic not near genes chr3R 21907535 intergenic CG6678 + chr3R_9_15760001 chr3R_15760001 RAL-900_125b 3291 chr3R 21907535 21907535 chr3R 28831801 28831802 25 6924266 35.0 37.0 36.0 0.7 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_25_25365001 chr3R_25365001 RAL-900_125b 3292 chr3R 9620956 9620956 chr3R 21907536 21907536 4 12286580 35.5 33.5 34.5 0.1 12286580 chr3R 9620956 intron CG8312 + chr3R 15764246 intergenic not near genes chr3R 21907536 intergenic CG6678 + chr3R_4_15760001 chr3R_15760001 RAL-900_125b 3293 chr3R 21907536 21907536 chr3R 28831801 28831802 37 6924266 35.0 37.0 36.0 1.0 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_37_25365001 chr3R_25365001 RAL-900_125b 3294 chr3R 21935563 21935591 chr3R 21937099 21937109 7 1521 55.0 27.5 41.2 0.2 1546 chr3R 21935563 intergenic not near genes chr3R 21936336 intergenic not near genes chr3R 21937109 intergenic not near genes chr3R_7_21935001 chr3R_21935001 RAL-900_125b 3295 chr3R 21935555 21935602 chr3R 21937110 21937155 17 1536 57.5 24.0 40.8 0.4 1600 chr3R 21935555 intergenic not near genes chr3R 21936355 intergenic not near genes chr3R 21937155 intergenic not near genes chr3R_17_21935001 chr3R_21935001 RAL-900_125b 3296 chr3R 21937186 21937234 chr3R 21937313 21937361 17 127 11.0 13.0 12.0 1.3 175 chr3R 21937186 intergenic not near genes chr3R 21937274 intergenic not near genes chr3R 21937361 intergenic not near genes chr3R_17_21935001 chr3R_21935001 RAL-900_125b 3297 chr3R 21952093 21952166 chr3R 21952228 21952301 31 135 7.5 11.0 9.2 3.0 208 chr3R 21952093 intron Eip93F + chr3R 21952197 intron Eip93F + chr3R 21952301 intron Eip93F + chr3R_31_21950001 chr3R_21950001 RAL-900_125b 3298 chr3R 21985189 21985255 chr3R 21985337 21985407 25 154 4.5 5.0 4.8 4.3 218 chr3R 21985189 intron Eip93F + chr3R 21985298 intron Eip93F + chr3R 21985407 intron Eip93F + chr3R_25_21985001 chr3R_21985001 RAL-900_125b 3299 chr3R 22055517 22055587 chr3R 22055756 22055826 24 238 1.5 2.5 2.0 8.0 309 chr3R 22055517 intron how + chr3R 22055672 intron how + chr3R 22055826 intron how + chr3R_24_22055001 chr3R_22055001 RAL-900_125b 3300 chr3R 22117373 22117447 chr3R 22117499 22117573 41 126 8.0 10.0 9.0 4.1 200 chr3R 22117373 intergenic Ir94b -,Ir94c - chr3R 22117473 intergenic Ir94c -,Ir94b - chr3R 22117573 intergenic Ir94c -,Ir94b - chr3R_41_22115001 chr3R_22115001 RAL-900_125b 3301 chr3R 22142172 22142221 chr3R 22142300 22142349 22 127 6.5 7.5 7.0 2.8 177 chr3R 22142172 intron SKIP + chr3R 22142260 intron SKIP + chr3R 22142349 intron SKIP + chr3R_22_22140001 chr3R_22140001 RAL-900_125b 3302 chr3R 22234037 22234059 chr3R 22234164 22234186 10 124 14.0 10.0 12.0 0.8 149 chr3R 22234037 intron SKIP + chr3R 22234112 intron SKIP + chr3R 22234186 intron SKIP + chr3R_10_22230001 chr3R_22230001 RAL-900_125b 3303 chr3R 22234061 22234098 chr3R 22234163 22234225 20 119 9.0 10.0 9.5 1.9 164 chr3R 22234061 intron SKIP + chr3R 22234143 intron SKIP + chr3R 22234225 intron SKIP + chr3R_20_22230001 chr3R_22230001 RAL-900_125b 3304 chr3R 22234635 22234712 chr3R 22236004 22236081 pogo 15 1369 7.5 6.0 6.8 1.9 1446 chr3R 22234635 intron SKIP + chr3R 22235358 intron SKIP + chr3R 22236081 intron SKIP + chr3R_15_22235001 chr3R_22235001 RAL-900_125b 3305 chr3R 22236240 22236289 chr3R 22236375 22236424 12 135 11.5 2.0 6.8 1.5 184 chr3R 22236240 intron SKIP + chr3R 22236332 intron SKIP + chr3R 22236424 intron SKIP + chr3R_12_22235001 chr3R_22235001 RAL-900_125b 3306 chr3R 22239450 22239525 chr3R 22248560 22248623 roo 17 9099 8.5 3.0 5.8 2.5 9173 chr3R 22239450 intron SKIP + chr3R 22244036 intron SKIP + chr3R 22248623 intron SKIP + chr3R_17_22240001 chr3R_22240001 RAL-900_125b 3307 chr3R 22251771 22251839 chr3R 22251940 22252008 19 168 5.0 11.0 8.0 2.1 237 chr3R 22251771 intron SKIP + chr3R 22251890 intron SKIP + chr3R 22252008 intron SKIP + chr3R_19_22250001 chr3R_22250001 RAL-900_125b 3308 chr3R 22336885 22336916 chr3R 22337017 22337048 12 132 9.0 8.0 8.5 1.3 163 chr3R 22336885 intron CG5388 - chr3R 22336966 intron CG5388 - chr3R 22337048 intron CG5388 - chr3R_12_22335001 chr3R_22335001 RAL-900_125b 3309 chr3R 22356282 22356287 chr3R 22356413 22356418 5 131 6.0 8.0 7.0 0.6 136 chr3R 22356282 intergenic rdhB +,Sar1 + chr3R 22356350 intergenic rdhB +,Sar1 + chr3R 22356418 intergenic rdhB +,Sar1 + chr3R_5_22355001 chr3R_22355001 RAL-900_125b 3310 chr3R 22424995 22425053 chr3R 22425208 22425265 21 215 60.5 67.0 63.8 0.3 270 chr3R 22424995 intergenic pinta -,CG13847 - chr3R 22425130 intergenic CG13847 -,pinta - chr3R 22425265 3` UTR CG13847 - chr3R_21_22425001 chr3R_22425001 RAL-900_125b 3311 chr3R 22428539 22428608 chr3R 22428660 22428734 32 125 10.0 9.5 9.8 3.0 195 chr3R 22428539 intron CG13847 - chr3R 22428636 intron CG13847 - chr3R 22428734 intron CG13847 - chr3R_32_22425001 chr3R_22425001 RAL-900_125b 3312 chr3R 22429940 22429981 chr3R 22430065 22430090 20 125 17.5 8.0 12.8 1.4 150 chr3R 22429940 intron CG13847 - chr3R 22430015 intron CG13847 - chr3R 22430090 intron CG13847 - chr3R_20_22430001 chr3R_22430001 RAL-900_125b 3313 chr3R 22433059 22433097 chr3R 22433209 22433247 12 149 14.0 17.5 15.8 0.7 188 chr3R 22433059 intron CG13847 - chr3R 22433153 intron CG13847 - chr3R 22433247 intron CG13847 - chr3R_12_22430001 chr3R_22430001 RAL-900_125b 3314 chr3R 22450497 22450570 chr3R 22453187 22453260 NOF 30 2687 7.0 7.0 7.0 3.8 2763 chr3R 22450497 intron CG34376 + chr3R 22451878 intron CG34376 + chr3R 22453260 intron CG34376 + chr3R_30_22450001 chr3R_22450001 RAL-900_125b 3315 chr3R 22493845 22493868 chr3R 22493935 22493969 4 97 7.5 11.5 9.5 0.4 124 chr3R 22493845 intergenic CG7046 + chr3R 22493907 intergenic CG7046 + chr3R 22493969 intergenic CG7046 + chr3R_4_22490001 chr3R_22490001 RAL-900_125b 3316 chr3R 22510395 22510421 chr3R 22510530 22510543 7 130 12.5 2.0 7.2 0.9 148 chr3R 22510395 intron Octbeta1R + chr3R 22510469 intron Octbeta1R + chr3R 22510543 intron Octbeta1R + chr3R_7_22510001 chr3R_22510001 RAL-900_125b 3317 chr3R 22510426 22510459 chr3R 22510529 22510594 15 110 6.5 2.0 4.2 2.9 168 chr3R 22510426 intron Octbeta1R + chr3R 22510510 intron Octbeta1R + chr3R 22510594 intron Octbeta1R + chr3R_15_22510001 chr3R_22510001 RAL-900_125b 3318 chr3R 22530608 22530620 chr3R 22531681 22531693 5 1073 15.0 1.0 8.0 0.6 1085 chr3R 22530608 intergenic CG33099 -,CG33093 - chr3R 22531150 exon CG33093 - chr3R 22531693 intron CG33093 - chr3R_5_22530001 chr3R_22530001 RAL-900_125b 3319 chr3R 22531679 22531724 chr3R 22531818 22531864 15 139 0.0 12.0 6.0 2.1 185 chr3R 22531679 intron CG33093 - chr3R 22531772 exon CG33093 - chr3R 22531864 exon CG33093 - chr3R_15_22530001 chr3R_22530001 RAL-900_125b 3320 chr3R 22623488 22623501 chr3R 22623631 22623644 6 141 23.0 13.0 18.0 0.3 156 chr3R 22623488 intron loco - chr3R 22623566 intron loco - chr3R 22623644 intron loco - chr3R_6_22620001 chr3R_22620001 RAL-900_125b 3321 chr3R 22623504 22623506 chr3R 22623621 22623649 4 133 23.0 9.0 16.0 0.2 145 chr3R 22623504 intron loco - chr3R 22623576 intron loco - chr3R 22623649 intron loco - chr3R_4_22620001 chr3R_22620001 RAL-900_125b 3322 chr3R 22623507 22623553 chr3R 22623620 22623690 29 141 12.5 9.0 10.8 2.5 183 chr3R 22623507 intron loco - chr3R 22623598 intron loco - chr3R 22623690 intron loco - chr3R_29_22620001 chr3R_22620001 RAL-900_125b 3323 chr3R 22632080 22632130 chr3R 22632202 22632253 8 129 0.0 3.0 1.5 3.2 173 chr3R 22632080 intron loco - chr3R 22632166 intron loco - chr3R 22632253 intron loco - chr3R_8_22630001 chr3R_22630001 RAL-900_125b 3324 chr3R 22636642 22636678 chr3R 22636769 22636805 14 127 6.5 8.0 7.2 1.7 163 chr3R 22636642 intron loco - chr3R 22636724 intron loco - chr3R 22636805 exon loco - chr3R_14_22635001 chr3R_22635001 RAL-900_125b 3325 chr3R 22755535 22755551 chr3R 22755673 22755689 6 136 20.0 7.5 13.8 0.4 154 chr3R 22755535 intron,intron CG7029 +,Usp12-46 + chr3R 22755612 intron,intron CG7029 +,Usp12-46 + chr3R 22755689 intron,intron CG7029 +,Usp12-46 + chr3R_6_22755001 chr3R_22755001 RAL-900_125b 3326 chr3R 22755559 22755607 chr3R 22755670 22755745 22 133 7.5 7.0 7.2 2.7 186 chr3R 22755559 intron,intron CG7029 +,Usp12-46 + chr3R 22755652 intron,intron CG7029 +,Usp12-46 + chr3R 22755745 intron,intron CG7029 +,Usp12-46 + chr3R_22_22755001 chr3R_22755001 RAL-900_125b 3327 chr3R 22769047 22769124 chr3R 22769174 22769231 38 126 12.0 14.5 13.2 2.7 184 chr3R 22769047 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769139 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769231 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_38_22765001 chr3R_22765001 RAL-900_125b 3328 chr3R 22835772 22835840 chr3R 22835904 22835972 21 132 8.5 12.5 10.5 1.8 200 chr3R 22835772 intergenic not near genes chr3R 22835872 intergenic not near genes chr3R 22835972 intergenic not near genes chr3R_21_22835001 chr3R_22835001 RAL-900_125b 3329 chr3R 22842371 22842412 chr3R 22842500 22842561 19 148 9.0 12.5 10.8 1.6 190 chr3R 22842371 intergenic not near genes chr3R 22842466 intergenic not near genes chr3R 22842561 intergenic not near genes chr3R_19_22840001 chr3R_22840001 RAL-900_125b 3330 chr3R 22871389 22871462 chr3R 22871569 22871645 24 180 6.5 8.5 7.5 2.8 256 chr3R 22871389 intergenic not near genes chr3R 22871517 intergenic not near genes chr3R 22871645 intergenic not near genes chr3R_24_22870001 chr3R_22870001 RAL-900_125b 3331 chr3R 22877054 22877116 chr3R 22877180 22877225 16 119 10.5 16.5 13.5 1.1 171 chr3R 22877054 intergenic not near genes chr3R 22877140 intergenic not near genes chr3R 22877225 intergenic not near genes chr3R_16_22875001 chr3R_22875001 RAL-900_125b 3332 chr3R 22881190 22881231 chr3R 22884945 22884986 Doc 13 3755 6.5 9.5 8.0 1.4 3796 chr3R 22881190 intergenic not near genes chr3R 22883088 intergenic not near genes chr3R 22884986 intergenic not near genes chr3R_13_22880001 chr3R_22880001 RAL-900_125b 3333 chr3R 22926760 22926829 chr3R 22926900 22926969 25 139 9.0 6.5 7.8 2.8 209 chr3R 22926760 intron klg + chr3R 22926864 intron klg + chr3R 22926969 intron klg + chr3R_25_22925001 chr3R_22925001 RAL-900_125b 3334 chr3R 22927833 22927897 chr3R 22927978 22928042 19 142 7.0 6.5 6.8 2.4 209 chr3R 22927833 intron klg + chr3R 22927938 intron klg + chr3R 22928042 intron klg + chr3R_19_22925001 chr3R_22925001 RAL-900_125b 3335 chr3R 22974260 22974310 chr3R 22974379 22974444 23 131 0.0 6.0 3.0 5.8 184 chr3R 22974260 intergenic not near genes chr3R 22974352 intergenic not near genes chr3R 22974444 intergenic not near genes chr3R_23_22970001 chr3R_22970001 RAL-900_125b 3336 chr3R 23041860 23041928 chr3R 23041992 23042060 36 132 12.5 12.5 12.5 2.7 200 chr3R 23041860 intergenic CG13838 + chr3R 23041960 intergenic CG13838 + chr3R 23042060 intergenic CG13838 + chr3R_36_23040001 chr3R_23040001 RAL-900_125b 3337 chr3R 23064131 23064170 chr3R 23064290 23064329 13 158 14.0 8.0 11.0 1.1 198 chr3R 23064131 exon CG17111 - chr3R 23064230 intron CG17111 - chr3R 23064329 exon CG17111 - chr3R_13_23060001 chr3R_23060001 RAL-900_125b 3338 chr3R 23064172 23064205 chr3R 23064286 23064348 11 142 6.5 7.5 7.0 1.4 176 chr3R 23064172 exon CG17111 - chr3R 23064260 intron CG17111 - chr3R 23064348 exon CG17111 - chr3R_11_23060001 chr3R_23060001 RAL-900_125b 3339 chr3R 23064830 23064893 chr3R 23064981 23065034 11 142 0.0 10.0 5.0 1.8 204 chr3R 23064830 intron CG17111 - chr3R 23064932 intron CG17111 - chr3R 23065034 intron CG17111 - chr3R_11_23060001 chr3R_23060001 RAL-900_125b 3340 chr3R 23070610 23070699 chr3R 23070740 23070827 22 133 0.0 1.0 0.5 14.7 217 chr3R 23070610 3` UTR CG13830 - chr3R 23070718 3` UTR CG13830 - chr3R 23070827 3` UTR CG13830 - chr3R_22_23070001 chr3R_23070001 RAL-900_125b 3341 chr3R 23073634 23073687 chr3R 23073747 23073809 20 132 6.0 6.0 6.0 2.9 175 chr3R 23073634 intron CG13830 - chr3R 23073722 intron CG13830 - chr3R 23073809 intron CG13830 - chr3R_20_23070001 chr3R_23070001 RAL-900_125b 3342 chr3R 23100114 23100131 chr3R 23100251 23100268 5 137 19.0 6.5 12.8 0.4 154 chr3R 23100114 intron,exon CG13830 -,CG6738 + chr3R 23100191 intron,exon CG13830 -,CG6738 + chr3R 23100268 intron,exon CG13830 -,CG6738 + chr3R_5_23100001 chr3R_23100001 RAL-900_125b 3343 chr3R 23100132 23100410 chr3R 23100244 23100511 30 129 11.0 5.5 8.2 3.3 379 chr3R 23100132 intron,exon CG13830 -,CG6738 + chr3R 23100322 intron,exon CG13830 -,CG6738 + chr3R 23100511 intron,exon CG13830 -,CG6738 + chr3R_30_23100001 chr3R_23100001 RAL-900_125b 3344 chr3R 23100422 23100437 chr3R 23100548 23100568 4 124 4.0 13.5 8.8 0.4 146 chr3R 23100422 intron,exon CG13830 -,CG6738 + chr3R 23100495 intron,exon CG13830 -,CG6738 + chr3R 23100568 intron,exon CG13830 -,CG6738 + chr3R_4_23100001 chr3R_23100001 RAL-900_125b 3345 chr3R 23225007 23225019 chr3R 23225133 23225145 8 126 20.5 0.0 10.2 0.7 138 chr3R 23225007 intron cnc - chr3R 23225076 intron cnc - chr3R 23225145 intron cnc - chr3R_8_23225001 chr3R_23225001 RAL-900_125b 3346 chr3R 23276969 23277041 chr3R 23277587 23277652 37 618 6.0 6.5 6.2 5.1 683 chr3R 23276969 intron orb - chr3R 23277310 intron orb - chr3R 23277652 intron orb - chr3R_37_23275001 chr3R_23275001 RAL-900_125b 3347 chr3R 23291219 23291277 chr3R 23291341 23291403 29 131 5.5 9.5 7.5 3.4 184 chr3R 23291219 3` UTR pnt - chr3R 23291311 3` UTR pnt - chr3R 23291403 exon pnt - chr3R_29_23290001 chr3R_23290001 RAL-900_125b 3348 chr3R 23318351 23318397 chr3R 23318487 23318554 12 145 0.0 4.5 2.2 3.8 203 chr3R 23318351 intron pnt - chr3R 23318452 intron pnt - chr3R 23318554 intron pnt - chr3R_12_23315001 chr3R_23315001 RAL-900_125b 3349 chr3R 23319658 23319676 chr3R 23319787 23319805 5 129 0.0 16.0 8.0 0.6 147 chr3R 23319658 intron pnt - chr3R 23319732 intron pnt - chr3R 23319805 intron pnt - chr3R_5_23315001 chr3R_23315001 RAL-900_125b 3350 chr3R 23335395 23335435 chr3R 23335523 23335554 20 125 12.0 9.0 10.5 1.7 159 chr3R 23335395 intron pnt - chr3R 23335474 intron pnt - chr3R 23335554 intron pnt - chr3R_20_23335001 chr3R_23335001 RAL-900_125b 3351 chr3R 23335438 23335460 chr3R 23335510 23335588 12 117 9.5 9.0 9.2 1.2 150 chr3R 23335438 intron pnt - chr3R 23335513 intron pnt - chr3R 23335588 intron pnt - chr3R_12_23335001 chr3R_23335001 RAL-900_125b 3352 chr3R 23356957 23356995 chr3R 23357093 23357131 14 136 17.0 15.5 16.2 0.8 174 chr3R 23356957 intron Sec13 + chr3R 23357044 intron Sec13 + chr3R 23357131 intron Sec13 + chr3R_14_23355001 chr3R_23355001 RAL-900_125b 3353 chr3R 23385541 23385610 chr3R 23385713 23385783 26 170 5.0 2.5 3.8 5.4 242 chr3R 23385541 intergenic not near genes chr3R 23385662 intergenic not near genes chr3R 23385783 intergenic not near genes chr3R_26_23385001 chr3R_23385001 RAL-900_125b 3354 chr3R 23390918 23390956 chr3R 23391050 23391085 5 130 8.0 4.5 6.2 0.7 167 chr3R 23390918 intergenic CR43387 + chr3R 23391002 intergenic CR43387 + chr3R 23391085 intergenic not near genes chr3R_5_23390001 chr3R_23390001 RAL-900_125b 3355 chr3R 23431930 23432003 chr3R 23432064 23432137 41 133 9.5 7.0 8.2 4.5 207 chr3R 23431930 intron CG4374 - chr3R 23432034 intron CG4374 - chr3R 23432137 intron CG4374 - chr3R_41_23430001 chr3R_23430001 RAL-900_125b 3356 chr3R 23488787 23488809 chr3R 23488922 23488944 4 135 26.0 24.0 25.0 0.2 157 chr3R 23488787 exon Ir94h + chr3R 23488866 exon Ir94h + chr3R 23488944 exon Ir94h + chr3R_4_23485001 chr3R_23485001 RAL-900_125b 3357 chr3R 23488814 23488832 chr3R 23488907 23488967 5 123 24.5 23.0 23.8 0.2 153 chr3R 23488814 exon Ir94h + chr3R 23488890 exon Ir94h + chr3R 23488967 exon Ir94h + chr3R_5_23485001 chr3R_23485001 RAL-900_125b 3358 chr3R 23497909 23497915 chr3R 23498032 23498048 4 130 14.5 8.0 11.2 0.3 139 chr3R 23497909 intergenic not near genes chr3R 23497978 intergenic not near genes chr3R 23498048 intergenic not near genes chr3R_4_23495001 chr3R_23495001 RAL-900_125b 3359 chr3R 23497916 23497973 chr3R 23498029 23498100 15 126 4.0 8.0 6.0 2.1 184 chr3R 23497916 intergenic not near genes chr3R 23498008 intergenic not near genes chr3R 23498100 intergenic not near genes chr3R_15_23495001 chr3R_23495001 RAL-900_125b 3360 chr3R 23515525 23515533 chr3R 23516736 23516744 1360 6 1211 2.5 0.0 1.2 2.7 1219 chr3R 23515525 intron Irk2 - chr3R 23516134 intron Irk2 - chr3R 23516744 intron Irk2 - chr3R_6_23515001 chr3R_23515001 RAL-900_125b 3361 chr3R 23536908 23536971 chr3R 23537140 23537203 34 231 8.5 13.5 11.0 2.8 295 chr3R 23536908 intergenic CG10168 -,CG16732 - chr3R 23537056 exon CG10168 - chr3R 23537203 exon CG10168 - chr3R_34_23535001 chr3R_23535001 RAL-900_125b 3362 chr3R 23548058 23548102 chr3R 23548381 23548427 12 342 8.0 8.0 8.0 1.3 369 chr3R 23548058 intergenic not near genes chr3R 23548242 intergenic not near genes chr3R 23548427 intergenic not near genes chr3R_12_23545001 chr3R_23545001 RAL-900_125b 3363 chr3R 23558349 23558423 chr3R 23560180 23560254 Bari1 33 1831 11.0 5.5 8.2 3.6 1905 chr3R 23558349 intron beat-IV + chr3R 23559302 intron beat-IV + chr3R 23560254 intron beat-IV + chr3R_33_23555001 chr3R_23555001 RAL-900_125b 3364 chr3R 23572703 23572747 chr3R 23572873 23572917 9 156 14.0 8.0 11.0 0.8 214 chr3R 23572703 intron beat-IV + chr3R 23572810 intron beat-IV + chr3R 23572917 intron beat-IV + chr3R_9_23570001 chr3R_23570001 RAL-900_125b 3365 chr3R 23572749 23572780 chr3R 23572871 23572950 12 151 7.0 8.0 7.5 1.4 201 chr3R 23572749 intron beat-IV + chr3R 23572850 intron beat-IV + chr3R 23572950 intron beat-IV + chr3R_12_23570001 chr3R_23570001 RAL-900_125b 3366 chr3R 23626089 23626158 chr3R 23626233 23626302 29 142 10.0 9.0 9.5 2.8 213 chr3R 23626089 intron CG31145 - chr3R 23626196 intron CG31145 - chr3R 23626302 intron CG31145 - chr3R_29_23625001 chr3R_23625001 RAL-900_125b 3367 chr3R 23644810 23644856 chr3R 23645127 23645178 21 315 9.5 10.0 9.8 1.9 368 chr3R 23644810 intron CG31145 - chr3R 23644994 intron CG31145 - chr3R 23645178 intron CG31145 - chr3R_21_23640001 chr3R_23640001 RAL-900_125b 3368 chr3R 23684661 23684716 chr3R 23685187 23685252 roo 27 529 10.0 10.5 10.2 2.4 591 chr3R 23684661 exon CG18754 + chr3R 23684956 intron CG18754 + chr3R 23685252 exon CG18754 + chr3R_27_23680001 chr3R_23680001 RAL-900_125b 3369 chr3R 23714032 23714043 chr3R 23714169 23714180 6 137 26.0 0.0 13.0 0.4 148 chr3R 23714032 intron nau - chr3R 23714106 intron nau - chr3R 23714180 intron nau - chr3R_6_23710001 chr3R_23710001 RAL-900_125b 3370 chr3R 23820601 23820660 chr3R 23820727 23820794 29 134 5.0 8.5 6.8 3.7 193 chr3R 23820601 5` UTR CG34355 + chr3R 23820698 5` UTR CG34355 + chr3R 23820794 5` UTR CG34355 + chr3R_29_23820001 chr3R_23820001 RAL-900_125b 3371 chr3R 23835365 23835427 chr3R 23844565 23844627 roo 33 9200 12.0 11.0 11.5 2.6 9262 chr3R 23835365 intron CG34355 + chr3R 23839996 intron CG34355 + chr3R 23844627 intron CG34355 + chr3R_33_23835001 chr3R_23835001 RAL-900_125b 3372 chr3R 23851037 23851078 chr3R 23858754 23858795 opus 20 7717 15.5 21.5 18.5 1.0 7758 chr3R 23851037 3` UTR CG34355 + chr3R 23854916 intergenic not near genes chr3R 23858795 intergenic not near genes chr3R_20_23850001 chr3R_23850001 RAL-900_125b 3373 chr3R 23868169 23868243 chr3R 23868297 23868336 28 124 8.0 7.0 7.5 3.3 167 chr3R 23868169 intron Pli - chr3R 23868252 intron Pli - chr3R 23868336 intron Pli - chr3R_28_23865001 chr3R_23865001 RAL-900_125b 3374 chr3R 23883057 23883083 chr3R 23883469 23883490 11 410 16.5 6.5 11.5 0.9 433 chr3R 23883057 intron Pli - chr3R 23883274 intron Pli - chr3R 23883490 intron Pli - chr3R_11_23880001 chr3R_23880001 RAL-900_125b 3375 chr3R 23883085 23883125 chr3R 23883467 23883537 23 388 8.0 6.5 7.2 2.8 452 chr3R 23883085 intron Pli - chr3R 23883311 intron Pli - chr3R 23883537 intron Pli - chr3R_23_23880001 chr3R_23880001 RAL-900_125b 3376 chr3R 23888046 23888109 chr3R 23888181 23888245 28 136 9.0 12.0 10.5 2.4 199 chr3R 23888046 intron Pli - chr3R 23888146 intron Pli - chr3R 23888245 intron Pli - chr3R_28_23885001 chr3R_23885001 RAL-900_125b 3377 chr3R 23948997 23949065 chr3R 23949124 23949187 32 127 7.0 5.0 6.0 4.6 190 chr3R 23948997 intergenic not near genes chr3R 23949092 intergenic not near genes chr3R 23949187 intergenic not near genes chr3R_32_23945001 chr3R_23945001 RAL-900_125b 3378 chr3R 24011618 24011649 chr3R 24011751 24011782 8 133 10.5 0.0 5.2 1.3 164 chr3R 24011618 intron KrT95D - chr3R 24011700 intron KrT95D - chr3R 24011782 intron KrT95D - chr3R_8_24010001 chr3R_24010001 RAL-900_125b 3379 chr3R 24069547 24069586 chr3R 24069683 24069722 11 136 7.0 16.5 11.8 0.9 175 chr3R 24069547 intron 4EHP - chr3R 24069634 intron 4EHP - chr3R 24069722 intron 4EHP - chr3R_11_24065001 chr3R_24065001 RAL-900_125b 3380 chr3R 24072043 24072101 chr3R 24072531 24072589 jockey 26 484 9.0 11.0 10.0 2.4 546 chr3R 24072043 intron 4EHP - chr3R 24072316 intron 4EHP - chr3R 24072589 intron 4EHP - chr3R_26_24070001 chr3R_24070001 RAL-900_125b 3381 chr3R 24076892 24076939 chr3R 24078388 24078456 hobo 22 1515 8.0 8.5 8.2 2.4 1564 chr3R 24076892 intron 4EHP - chr3R 24077674 intron 4EHP - chr3R 24078456 intron 4EHP - chr3R_22_24075001 chr3R_24075001 RAL-900_125b 3382 chr3R 24100583 24100653 chr3R 24100723 24100793 36 139 9.0 9.5 9.2 3.5 210 chr3R 24100583 intron 4EHP - chr3R 24100688 intron 4EHP - chr3R 24100793 intron 4EHP - chr3R_36_24100001 chr3R_24100001 RAL-900_125b 3383 chr3R 24199699 24199768 chr3R 24199829 24199872 18 124 6.0 8.5 7.2 2.2 173 chr3R 24199699 intron twin - chr3R 24199786 intron twin - chr3R 24199872 intron twin - chr3R_18_24195001 chr3R_24195001 RAL-900_125b 3384 chr3R 24207179 24207201 chr3R 24212305 24212327 flea 11 5126 22.0 16.5 19.2 0.5 5148 chr3R 24207179 intron twin - chr3R 24209753 intron twin - chr3R 24212327 intron twin - chr3R_11_24205001 chr3R_24205001 RAL-900_125b 3385 chr3R 24207208 24207236 chr3R 24212301 24212362 flea 11 5121 16.0 15.0 15.5 0.7 5154 chr3R 24207208 intron twin - chr3R 24209785 intron twin - chr3R 24212362 intron twin - chr3R_11_24205001 chr3R_24205001 RAL-900_125b 3386 chr3R 24431555 24431621 chr3R 24431684 24431750 27 128 5.5 0.0 2.8 7.1 195 chr3R 24431555 intron nAChRalpha1 - chr3R 24431652 intron nAChRalpha1 - chr3R 24431750 intron nAChRalpha1 - chr3R_27_24430001 chr3R_24430001 RAL-900_125b 3387 chr3R 24476598 24476610 chr3R 24476730 24476742 10 131 2.5 7.5 5.0 1.7 144 chr3R 24476598 intergenic not near genes chr3R 24476670 intergenic not near genes chr3R 24476742 intergenic not near genes chr3R_10_24475001 chr3R_24475001 RAL-900_125b 3388 chr3R 24476611 24476668 chr3R 24476722 24476750 16 126 3.0 4.5 3.8 3.3 139 chr3R 24476611 intergenic not near genes chr3R 24476680 intergenic not near genes chr3R 24476750 intergenic not near genes chr3R_16_24475001 chr3R_24475001 RAL-900_125b 3389 chr3R 24482907 24482930 chr3R 24483014 24483068 5 124 9.5 9.5 9.5 0.5 161 chr3R 24482907 intergenic not near genes chr3R 24482988 intergenic not near genes chr3R 24483068 intergenic not near genes chr3R_5_24480001 chr3R_24480001 RAL-900_125b 3390 chr3R 24493015 24493087 chr3R 24493148 24493223 20 136 7.5 10.0 8.8 2.0 208 chr3R 24493015 intergenic not near genes chr3R 24493119 intergenic not near genes chr3R 24493223 intergenic not near genes chr3R_20_24490001 chr3R_24490001 RAL-900_125b 3391 chr3R 24493238 24493304 chr3R 24493518 24493584 BS 37 280 11.0 14.5 12.8 2.7 346 chr3R 24493238 intergenic not near genes chr3R 24493411 intergenic not near genes chr3R 24493584 intergenic not near genes chr3R_37_24490001 chr3R_24490001 RAL-900_125b 3392 chr3R 24527761 24527769 chr3R 24527902 24527910 4 141 18.5 5.5 12.0 0.3 149 chr3R 24527761 intergenic CG13618 +,CG6607 + chr3R 24527836 intergenic CG6607 +,CG13618 + chr3R 24527910 intergenic CG6607 +,CG13618 + chr3R_4_24525001 chr3R_24525001 RAL-900_125b 3393 chr3R 24527770 24527829 chr3R 24527897 24527970 33 140 7.0 4.5 5.8 4.9 200 chr3R 24527770 intergenic CG13618 +,CG6607 + chr3R 24527870 intergenic CG6607 +,CG13618 + chr3R 24527970 intergenic CG6607 +,CG13618 + chr3R_33_24525001 chr3R_24525001 RAL-900_125b 3394 chr3R 24566315 24566388 chr3R 24566452 24566525 25 136 4.0 4.5 4.2 4.8 210 chr3R 24566315 intron CG13624 - chr3R 24566420 intron CG13624 - chr3R 24566525 intron CG13624 - chr3R_25_24565001 chr3R_24565001 RAL-900_125b 3395 chr3R 24572074 24572120 chr3R 24572218 24572264 23 144 12.0 11.5 11.8 1.8 190 chr3R 24572074 intron CG13624 - chr3R 24572169 intron CG13624 - chr3R 24572264 intron CG13624 - chr3R_23_24570001 chr3R_24570001 RAL-900_125b 3396 chr3R 24572122 24572129 chr3R 24572215 24572273 6 136 10.0 11.0 10.5 0.5 151 chr3R 24572122 intron CG13624 - chr3R 24572198 intron CG13624 - chr3R 24572273 intron CG13624 - chr3R_6_24570001 chr3R_24570001 RAL-900_125b 3397 chr3R 24594632 24594663 chr3R 24594917 24594953 pogo 10 290 10.5 16.0 13.2 0.7 321 chr3R 24594632 intron mld + chr3R 24594792 intron mld + chr3R 24594953 intron mld + chr3R_10_24590001 chr3R_24590001 RAL-900_125b 3398 chr3R 24624326 24624382 chr3R 24624465 24624521 15 138 5.5 7.5 6.5 2.0 195 chr3R 24624326 intron Syx18 - chr3R 24624424 intron Syx18 - chr3R 24624521 exon Syx18 - chr3R_15_24620001 chr3R_24620001 RAL-900_125b 3399 chr3R 24665844 24665907 chr3R 24665955 24666004 22 114 7.5 5.5 6.5 2.9 160 chr3R 24665844 intron slo + chr3R 24665924 intron slo + chr3R 24666004 intron slo + chr3R_22_24665001 chr3R_24665001 RAL-900_125b 3400 chr3R 24667568 24667596 chr3R 24667685 24667723 14 126 10.0 0.0 5.0 2.3 155 chr3R 24667568 intron slo + chr3R 24667646 intron slo + chr3R 24667723 intron slo + chr3R_14_24665001 chr3R_24665001 RAL-900_125b 3401 chr3R 24670004 24670194 chr3R 24670164 24670329 35 152 0.0 0.0 0.0 35.0 325 chr3R 24670004 intron slo + chr3R 24670166 intron slo + chr3R 24670329 intron slo + chr3R_35_24670001 chr3R_24670001 RAL-900_125b 3402 chr3R 24730051 24730120 chr3R 24732479 24732555 Doc 16 2428 4.5 5.0 4.8 2.8 2504 chr3R 24730051 intron tok + chr3R 24731303 intron tok + chr3R 24732555 intron tok + chr3R_16_24730001 chr3R_24730001 RAL-900_125b 3403 chr3R 24742982 24743056 chr3R 24743117 24743191 31 133 6.5 5.0 5.8 4.6 209 chr3R 24742982 intron tok + chr3R 24743086 intron tok + chr3R 24743191 exon tok + chr3R_31_24740001 chr3R_24740001 RAL-900_125b 3404 chr3R 24787498 24787560 chr3R 24787624 24787686 32 126 6.0 1.0 3.5 7.1 188 chr3R 24787498 intergenic CG5805 - chr3R 24787592 intergenic CG5805 -,Ets96B + chr3R 24787686 intergenic CG5805 -,Ets96B + chr3R_32_24785001 chr3R_24785001 RAL-900_125b 3405 chr3R 24815418 24815446 chr3R 24815554 24815582 15 135 6.0 14.0 10.0 1.4 164 chr3R 24815418 exon CG5808 - chr3R 24815500 exon CG5808 - chr3R 24815582 exon CG5808 - chr3R_15_24815001 chr3R_24815001 RAL-900_125b 3406 chr3R 24838176 24838188 chr3R 24838369 24838381 6 193 7.5 19.0 13.2 0.4 205 chr3R 24838176 5` UTR sosie + chr3R 24838278 intron sosie + chr3R 24838381 intron sosie + chr3R_6_24835001 chr3R_24835001 RAL-900_125b 3407 chr3R 24912436 24912505 chr3R 24912568 24912637 29 131 6.0 0.0 3.0 7.2 201 chr3R 24912436 intergenic not near genes chr3R 24912536 intergenic CR44267 + chr3R 24912637 intergenic CR44267 + chr3R_29_24910001 chr3R_24910001 RAL-900_125b 3408 chr3R 24927085 24927143 chr3R 24931926 24931984 Doc 22 4840 15.5 11.0 13.2 1.5 4899 chr3R 24927085 3` UTR Trf4-2 + chr3R 24929534 intergenic not near genes chr3R 24931984 intergenic CG11771 + chr3R_22_24925001 chr3R_24925001 RAL-900_125b 3409 chr3R 24974863 24974934 chr3R 24974992 24975063 35 128 8.5 8.5 8.5 3.7 200 chr3R 24974863 intergenic not near genes chr3R 24974963 intergenic not near genes chr3R 24975063 intergenic not near genes chr3R_35_24970001 chr3R_24970001 RAL-900_125b 3410 chr3R 25008199 25008212 chr3R 25008282 25008298 4 104 11.5 10.5 11.0 0.3 99 chr3R 25008199 intron tnc + chr3R 25008248 intron tnc + chr3R 25008298 intron tnc + chr3R_4_25005001 chr3R_25005001 RAL-900_125b 3411 chr3R 25027496 25027564 chr3R 25027759 25027827 25 262 8.0 9.5 8.8 2.6 331 chr3R 25027496 intron Hr96 + chr3R 25027662 intron Hr96 + chr3R 25027827 intron Hr96 + chr3R_25_25025001 chr3R_25025001 RAL-900_125b 3412 chr3R 25041505 25041525 chr3R 25041633 25041653 6 128 0.5 22.0 11.2 0.5 148 chr3R 25041505 intron 5PtaseI - chr3R 25041579 intron 5PtaseI - chr3R 25041653 intron 5PtaseI - chr3R_6_25040001 chr3R_25040001 RAL-900_125b 3413 chr3R 25082252 25082266 chr3R 25082379 25082393 6 127 13.0 21.5 17.2 0.3 141 chr3R 25082252 intergenic fd96Ca + chr3R 25082322 intergenic fd96Ca + chr3R 25082393 intergenic fd96Ca + chr3R_6_25080001 chr3R_25080001 RAL-900_125b 3414 chr3R 25086014 25086043 chr3R 25086140 25086169 14 126 17.5 11.0 14.2 0.9 155 chr3R 25086014 intergenic not near genes chr3R 25086092 intergenic not near genes chr3R 25086169 intergenic not near genes chr3R_14_25085001 chr3R_25085001 RAL-900_125b 3415 chr3R 25091319 25091380 chr3R 25091472 25091535 13 153 5.0 0.0 2.5 3.7 216 chr3R 25091319 intergenic not near genes chr3R 25091427 intergenic not near genes chr3R 25091535 intergenic not near genes chr3R_13_25090001 chr3R_25090001 RAL-900_125b 3416 chr3R 25166154 25166362 chr3R 25166281 25166488 36 127 0.0 0.0 0.0 36.0 334 chr3R 25166154 intergenic not near genes chr3R 25166321 intergenic not near genes chr3R 25166488 intergenic not near genes chr3R_36_25165001 chr3R_25165001 RAL-900_125b 3417 chr3R 25200499 25200570 chr3R 25200630 25200701 41 131 8.0 9.5 8.8 4.2 202 chr3R 25200499 intron,intron Cad96Ca -,CG13654 + chr3R 25200600 intron,intron Cad96Ca -,CG13654 + chr3R 25200701 intron,intron Cad96Ca -,CG13654 + chr3R_41_25200001 chr3R_25200001 RAL-900_125b 3418 chr3R 25273010 25273033 chr3R 25273233 25273256 10 223 6.5 21.5 14.0 0.7 246 chr3R 25273010 3` UTR,exon CG11889 +,CG11891 + chr3R 25273133 3` UTR,exon CG11889 +,CG11891 + chr3R 25273256 3` UTR,3` UTR CG11889 +,CG11891 + chr3R_10_25270001 chr3R_25270001 RAL-900_125b 3419 chr3R 25296117 25296188 chr3R 25296248 25296319 29 131 8.0 11.5 9.8 2.7 202 chr3R 25296117 intergenic CG31097 - chr3R 25296218 3` UTR CG31097 - chr3R 25296319 3` UTR CG31097 - chr3R_29_25295001 chr3R_25295001 RAL-900_125b 3420 chr3R 25368428 25368505 chr3R 25368596 25368677 23 169 8.0 0.0 4.0 4.6 249 chr3R 25368428 intron Fur1 - chr3R 25368552 intron Fur1 - chr3R 25368677 intron Fur1 - chr3R_23_25365001 chr3R_25365001 RAL-900_125b 3421 chr3R 25374792 25374871 chr3R 25374920 25374999 24 128 7.5 1.0 4.2 4.6 207 chr3R 25374792 intron Fur1 - chr3R 25374896 intron Fur1 - chr3R 25374999 intron Fur1 - chr3R_24_25370001 chr3R_25370001 RAL-900_125b 3422 chr3R 25411728 25411796 chr3R 25411874 25411949 30 146 7.5 9.0 8.2 3.3 221 chr3R 25411728 intron Fur1 - chr3R 25411838 intron Fur1 - chr3R 25411949 intron Fur1 - chr3R_30_25410001 chr3R_25410001 RAL-900_125b 3423 chr3R 25465008 25465087 chr3R 25465135 25465214 7 127 6.5 4.5 5.5 1.1 206 chr3R 25465008 intron Fur1 - chr3R 25465111 intron Fur1 - chr3R 25465214 intron Fur1 - chr3R_7_25465001 chr3R_25465001 RAL-900_125b 3424 chr3R 25528001 25528037 chr3R 25528145 25528190 13 150 12.5 7.5 10.0 1.2 189 chr3R 25528001 intron msi + chr3R 25528096 intron msi + chr3R 25528190 intron msi + chr3R_13_25525001 chr3R_25525001 RAL-900_125b 3425 chr3R 25590175 25590230 chr3R 25590329 25590384 23 153 13.0 9.0 11.0 1.9 209 chr3R 25590175 intron msi + chr3R 25590280 intron msi + chr3R 25590384 intron msi + chr3R_23_25590001 chr3R_25590001 RAL-900_125b 3426 chr3R 25671194 25671267 chr3R 25671342 25671417 18 150 5.0 8.0 6.5 2.4 223 chr3R 25671194 intron Lgr3 + chr3R 25671306 intron Lgr3 + chr3R 25671417 intron Lgr3 + chr3R_18_25670001 chr3R_25670001 RAL-900_125b 3427 chr3R 25689083 25689146 chr3R 25689241 25689304 22 156 11.0 9.5 10.2 2.0 221 chr3R 25689083 intergenic not near genes chr3R 25689194 intergenic not near genes chr3R 25689304 intergenic not near genes chr3R_22_25685001 chr3R_25685001 RAL-900_125b 3428 chr3R 25725790 25725854 chr3R 25735000 25735064 roo 37 9210 9.5 6.5 8.0 4.1 9274 chr3R 25725790 intron LpR2 - chr3R 25730427 intron LpR2 - chr3R 25735064 intron LpR2 - chr3R_37_25730001 chr3R_25730001 RAL-900_125b 3429 chr3R 25755151 25755219 chr3R 25756061 25756129 25 910 10.5 9.0 9.8 2.3 978 chr3R 25755151 intron LpR1 - chr3R 25755640 intron LpR1 - chr3R 25756129 intron LpR1 - chr3R_25_25755001 chr3R_25755001 RAL-900_125b 3430 chr3R 19472244 19472244 chr3R 25764042 25764048 4 6291800 41.5 19.5 30.5 0.1 6291804 chr3R 19472244 intron Dys + chr3R 22618146 exon CG31161 + chr3R 25764048 intergenic not near genes chr3R_4_22615001 chr3R_22615001 RAL-900_125b 3431 chr3R 25764053 25764057 chr3R 25764182 25764186 4 129 14.5 0.5 7.5 0.5 133 chr3R 25764053 intergenic not near genes chr3R 25764120 intergenic not near genes chr3R 25764186 intergenic not near genes chr3R_4_25760001 chr3R_25760001 RAL-900_125b 3432 chr3R 25765843 25765911 chr3R 25765960 25766024 19 121 5.5 4.0 4.8 3.3 181 chr3R 25765843 intergenic not near genes chr3R 25765934 intergenic not near genes chr3R 25766024 intergenic not near genes chr3R_19_25765001 chr3R_25765001 RAL-900_125b 3433 chr3R 25796361 25796412 chr3R 25796460 25796541 10 126 7.0 0.5 3.8 2.1 180 chr3R 25796361 intergenic CR43847 - chr3R 25796451 intergenic CR43847 - chr3R 25796541 intergenic CR43847 - chr3R_10_25795001 chr3R_25795001 RAL-900_125b 3434 chr3R 25832658 25832710 chr3R 25841890 25841940 roo 18 9230 9.5 9.0 9.2 1.8 9282 chr3R 25832658 exon alpha4GT2 + chr3R 25837299 intron alpha4GT2 + chr3R 25841940 exon alpha4GT2 + chr3R_18_25835001 chr3R_25835001 RAL-900_125b 3435 chr3R 25884415 25884482 chr3R 25887403 25887470 34 2987 43.0 45.5 44.2 0.8 3055 chr3R 25884415 intron SppL + chr3R 25885942 exon SppL + chr3R 25887470 3` UTR SppL + chr3R_34_25885001 chr3R_25885001 RAL-900_125b 3436 chr3R 25884427 25884495 chr3R 25887903 25887971 35 3476 43.0 69.5 56.2 0.6 3544 chr3R 25884427 intron SppL + chr3R 25886199 intron SppL + chr3R 25887971 3` UTR SppL + chr3R_35_25885001 chr3R_25885001 RAL-900_125b 3437 chr3R 25900203 25900272 chr3R 25900330 25900399 32 123 9.0 11.0 10.0 2.9 196 chr3R 25900203 5` UTR CG31091 + chr3R 25900301 5` UTR CG31091 + chr3R 25900399 5` UTR CG31091 + chr3R_32_25900001 chr3R_25900001 RAL-900_125b 3438 chr3R 25931482 25931533 chr3R 25931624 25931670 20 139 13.0 0.0 6.5 2.7 188 chr3R 25931482 intron,5` UTR CCAP-R -,CR34024 + chr3R 25931576 intron,5` UTR CCAP-R -,CR34024 + chr3R 25931670 intron,intron CCAP-R -,CR34024 + chr3R_20_25930001 chr3R_25930001 RAL-900_125b 3439 chr3R 26013802 26013865 chr3R 26013932 26013995 32 130 13.0 12.0 12.5 2.4 193 chr3R 26013802 intergenic not near genes chr3R 26013898 intergenic not near genes chr3R 26013995 intergenic not near genes chr3R_32_26010001 chr3R_26010001 RAL-900_125b 3440 chr3R 26093799 26093874 chr3R 26093927 26093985 39 125 9.0 11.0 10.0 3.5 186 chr3R 26093799 intron dys - chr3R 26093892 intron dys - chr3R 26093985 intron dys - chr3R_39_26090001 chr3R_26090001 RAL-900_125b 3441 chr3R 26121897 26121971 chr3R 26122044 26122118 10 146 4.5 5.0 4.8 1.7 221 chr3R 26121897 intron CG31324 + chr3R 26122008 intron CG31324 + chr3R 26122118 intron CG31324 + chr3R_10_26120001 chr3R_26120001 RAL-900_125b 3442 chr3R 26122411 26122475 chr3R 26122537 26122601 18 125 8.0 13.5 10.8 1.5 190 chr3R 26122411 intron CG31324 + chr3R 26122506 intron CG31324 + chr3R 26122601 intron CG31324 + chr3R_18_26120001 chr3R_26120001 RAL-900_125b 3443 chr3R 26126503 26126566 chr3R 26126639 26126702 34 136 9.5 6.0 7.8 3.9 199 chr3R 26126503 intron CG31324 + chr3R 26126602 intron CG31324 + chr3R 26126702 intron,5` UTR CG31324 +,CG14556 + chr3R_34_26125001 chr3R_26125001 RAL-900_125b 3444 chr3R 26241208 26241265 chr3R 26241349 26241406 22 141 10.0 11.0 10.5 1.9 198 chr3R 26241208 intron CR42745 + chr3R 26241307 intron CR42745 + chr3R 26241406 intron CR42745 + chr3R_22_26240001 chr3R_26240001 RAL-900_125b 3445 chr3R 26339186 26339256 chr3R 26339331 26339401 34 143 4.0 6.5 5.2 5.5 215 chr3R 26339186 intron CG33970 + chr3R 26339294 intron CG33970 + chr3R 26339401 intron CG33970 + chr3R_34_26335001 chr3R_26335001 RAL-900_125b 3446 chr3R 26349215 26349238 chr3R 26349361 26349384 9 146 11.5 0.0 5.8 1.3 169 chr3R 26349215 intron CG33970 + chr3R 26349300 intron CG33970 + chr3R 26349384 intron CG33970 + chr3R_9_26345001 chr3R_26345001 RAL-900_125b 3447 chr3R 26370315 26370362 chr3R 26370431 26370495 27 132 0.5 9.5 5.0 4.5 180 chr3R 26370315 intergenic not near genes chr3R 26370405 intergenic not near genes chr3R 26370495 intergenic not near genes chr3R_27_26370001 chr3R_26370001 RAL-900_125b 3448 chr3R 26376278 26376355 chr3R 26385488 26385579 roo 16 9210 7.0 0.0 3.5 3.6 9301 chr3R 26376278 intergenic not near genes chr3R 26380928 intergenic not near genes chr3R 26385579 intergenic not near genes chr3R_16_26380001 chr3R_26380001 RAL-900_125b 3449 chr3R 26403943 26404020 chr3R 26405147 26405224 27 1201 6.0 5.5 5.8 4.0 1281 chr3R 26403943 intergenic ppk15 - chr3R 26404584 intergenic not near genes chr3R 26405224 intergenic not near genes chr3R_27_26400001 chr3R_26400001 RAL-900_125b 3450 chr3R 26419580 26419658 chr3R 26419711 26419784 33 128 10.0 7.5 8.8 3.4 204 chr3R 26419580 intergenic not near genes chr3R 26419682 intergenic not near genes chr3R 26419784 intergenic not near genes chr3R_33_26415001 chr3R_26415001 RAL-900_125b 3451 chr3R 26436944 26436993 chr3R 26437419 26437493 27 495 11.5 9.5 10.5 2.3 549 chr3R 26436944 intergenic not near genes chr3R 26437218 intergenic not near genes chr3R 26437493 intergenic not near genes chr3R_27_26435001 chr3R_26435001 RAL-900_125b 3452 chr3R 26503594 26503653 chr3R 26504282 26504357 15 695 62.0 54.5 58.2 0.3 763 chr3R 26503594 intron plum - chr3R 26503976 intron plum - chr3R 26504357 intron plum - chr3R_15_26500001 chr3R_26500001 RAL-900_125b 3453 chr3R 26508879 26508947 chr3R 26509363 26509433 31 485 3.5 7.0 5.2 5.0 554 chr3R 26508879 intron plum - chr3R 26509156 intron plum - chr3R 26509433 intron plum - chr3R_31_26505001 chr3R_26505001 RAL-900_125b 3454 chr3R 26510461 26510520 chr3R 26519572 26519631 roo 28 9111 10.0 15.5 12.8 2.0 9170 chr3R 26510461 intron plum - chr3R 26515046 intron plum - chr3R 26519631 intron,5` UTR plum -,CR45226 + chr3R_28_26515001 chr3R_26515001 RAL-900_125b 3455 chr3R 26522584 26522640 chr3R 26522720 26522776 20 135 15.0 14.0 14.5 1.3 192 chr3R 26522584 intron plum - chr3R 26522680 intron plum - chr3R 26522776 intron plum - chr3R_20_26520001 chr3R_26520001 RAL-900_125b 3456 chr3R 26558286 26558351 chr3R 26565648 26565701 Stalker4 33 7356 9.5 13.5 11.5 2.6 7415 chr3R 26558286 intron scrib + chr3R 26561994 intron scrib + chr3R 26565701 intron scrib + chr3R_33_26560001 chr3R_26560001 RAL-900_125b 3457 chr3R 26571553 26571616 chr3R 26571676 26571724 35 125 8.0 1.5 4.8 6.0 171 chr3R 26571553 intron scrib + chr3R 26571638 intron scrib + chr3R 26571724 intron scrib + chr3R_35_26570001 chr3R_26570001 RAL-900_125b 3458 chr3R 26607691 26607763 chr3R 26607817 26607889 31 126 8.5 15.0 11.8 2.4 198 chr3R 26607691 5` UTR CR44951 + chr3R 26607790 5` UTR CR44951 + chr3R 26607889 5` UTR CR44951 + chr3R_31_26605001 chr3R_26605001 RAL-900_125b 3459 chr3R 26611303 26611332 chr3R 26611424 26611458 16 124 12.5 3.5 8.0 1.8 155 chr3R 26611303 intergenic not near genes chr3R 26611380 intergenic not near genes chr3R 26611458 intergenic not near genes chr3R_16_26610001 chr3R_26610001 RAL-900_125b 3460 chr3R 26611335 26611375 chr3R 26611421 26611502 13 120 6.5 3.0 4.8 2.2 167 chr3R 26611335 intergenic not near genes chr3R 26611418 intergenic not near genes chr3R 26611502 intergenic not near genes chr3R_13_26610001 chr3R_26610001 RAL-900_125b 3461 chr3R 26633645 26633659 chr3R 26633861 26633875 5 215 21.5 6.0 13.8 0.3 230 chr3R 26633645 intergenic TwdlH + chr3R 26633760 5` UTR TwdlH + chr3R 26633875 exon TwdlH + chr3R_5_26630001 chr3R_26630001 RAL-900_125b 3462 chr3R 26633661 26633717 chr3R 26633851 26633888 25 210 7.5 3.5 5.5 3.8 227 chr3R 26633661 intergenic TwdlH + chr3R 26633774 5` UTR TwdlH + chr3R 26633888 exon TwdlH + chr3R_25_26630001 chr3R_26630001 RAL-900_125b 3463 chr3R 26642690 26642750 chr3R 26643133 26643193 jockey 33 441 13.5 9.0 11.2 2.7 503 chr3R 26642690 intergenic not near genes chr3R 26642942 intergenic not near genes chr3R 26643193 intergenic not near genes chr3R_33_26640001 chr3R_26640001 RAL-900_125b 3464 chr3R 26669611 26669689 chr3R 26669744 26669816 22 132 8.0 8.5 8.2 2.4 205 chr3R 26669611 intron beat-VII - chr3R 26669714 intron beat-VII - chr3R 26669816 intron beat-VII - chr3R_22_26665001 chr3R_26665001 RAL-900_125b 3465 chr3R 26710778 26710856 chr3R 26710912 26710990 38 133 7.5 16.0 11.8 3.0 212 chr3R 26710778 intron amon - chr3R 26710884 intron amon - chr3R 26710990 intron amon - chr3R_38_26710001 chr3R_26710001 RAL-900_125b 3466 chr3R 26729242 26729302 chr3R 26729371 26729433 22 131 6.5 14.0 10.2 2.0 191 chr3R 26729242 intron,3` UTR CG14246 +,CG14245 + chr3R 26729338 intron,3` UTR CG14246 +,CG14245 + chr3R 26729433 intron CG14246 + chr3R_22_26725001 chr3R_26725001 RAL-900_125b 3467 chr3R 26789612 26789622 chr3R 26789741 26789751 5 129 0.0 10.0 5.0 0.8 139 chr3R 26789612 intergenic not near genes chr3R 26789682 intergenic not near genes chr3R 26789751 intergenic not near genes chr3R_5_26785001 chr3R_26785001 RAL-900_125b 3468 chr3R 26810503 26810576 chr3R 26811038 26811111 roo 23 535 11.0 9.0 10.0 2.1 608 chr3R 26810503 intron Tl + chr3R 26810807 intron Tl + chr3R 26811111 intron Tl + chr3R_23_26810001 chr3R_26810001 RAL-900_125b 3469 chr3R 26819697 26819751 chr3R 26819825 26819880 25 129 11.5 8.0 9.8 2.3 183 chr3R 26819697 intron Tl + chr3R 26819788 intron Tl + chr3R 26819880 intron Tl + chr3R_25_26815001 chr3R_26815001 RAL-900_125b 3470 chr3R 26835070 26835147 chr3R 26835207 26835275 13 130 6.0 5.5 5.8 1.9 205 chr3R 26835070 intron Tl + chr3R 26835172 intron Tl + chr3R 26835275 intron Tl + chr3R_13_26835001 chr3R_26835001 RAL-900_125b 3471 chr3R 26845527 26845531 chr3R 26845657 26845661 4 130 20.5 9.5 15.0 0.2 134 chr3R 26845527 intron Lerp - chr3R 26845594 intron Lerp - chr3R 26845661 intron Lerp - chr3R_4_26845001 chr3R_26845001 RAL-900_125b 3472 chr3R 26845535 26845595 chr3R 26845656 26845725 25 128 7.0 9.5 8.2 2.7 190 chr3R 26845535 intron Lerp - chr3R 26845630 intron Lerp - chr3R 26845725 intron Lerp - chr3R_25_26845001 chr3R_26845001 RAL-900_125b 3473 chr3R 26852450 26852495 chr3R 26852587 26852632 7 132 0.0 15.0 7.5 0.8 182 chr3R 26852450 intron Lerp - chr3R 26852541 intron Lerp - chr3R 26852632 intron Lerp - chr3R_7_26850001 chr3R_26850001 RAL-900_125b 3474 chr3R 26981053 26981114 chr3R 26981188 26981239 33 134 5.0 10.5 7.8 3.7 186 chr3R 26981053 intron CG14253 + chr3R 26981146 intron CG14253 + chr3R 26981239 intron CG14253 + chr3R_33_26980001 chr3R_26980001 RAL-900_125b 3475 chr3R 26990847 26990915 chr3R 26990981 26991049 34 133 9.5 8.0 8.8 3.5 202 chr3R 26990847 intergenic not near genes chr3R 26990948 intergenic not near genes chr3R 26991049 intergenic not near genes chr3R_34_26990001 chr3R_26990001 RAL-900_125b 3476 chr3R 27007361 27007430 chr3R 27016546 27016615 roo 36 9183 10.0 8.5 9.2 3.5 9254 chr3R 27007361 intron RYa-R + chr3R 27011988 intron RYa-R + chr3R 27016615 intron RYa-R + chr3R_36_27010001 chr3R_27010001 RAL-900_125b 3477 chr3R 27027638 27027696 chr3R 27027772 27027828 21 134 6.5 6.0 6.2 2.9 190 chr3R 27027638 intron RYa-R + chr3R 27027733 intron RYa-R + chr3R 27027828 intron RYa-R + chr3R_21_27025001 chr3R_27025001 RAL-900_125b 3478 chr3R 27028677 27028753 chr3R 27028806 27028882 32 129 8.0 8.0 8.0 3.6 205 chr3R 27028677 exon RYa-R + chr3R 27028780 intron RYa-R + chr3R 27028882 intron RYa-R + chr3R_32_27025001 chr3R_27025001 RAL-900_125b 3479 chr3R 27036356 27036435 chr3R 27036519 27036598 36 160 7.5 7.0 7.2 4.4 242 chr3R 27036356 intron RYa-R + chr3R 27036477 intron RYa-R + chr3R 27036598 intron RYa-R + chr3R_36_27035001 chr3R_27035001 RAL-900_125b 3480 chr3R 27041769 27041802 chr3R 27041909 27041942 13 140 14.5 9.0 11.8 1.0 173 chr3R 27041769 intron RYa-R + chr3R 27041856 intron RYa-R + chr3R 27041942 intron RYa-R + chr3R_13_27040001 chr3R_27040001 RAL-900_125b 3481 chr3R 27041803 27041837 chr3R 27041906 27041977 20 136 8.5 8.5 8.5 2.1 174 chr3R 27041803 intron RYa-R + chr3R 27041890 intron RYa-R + chr3R 27041977 intron RYa-R + chr3R_20_27040001 chr3R_27040001 RAL-900_125b 3482 chr3R 27070813 27070882 chr3R 27071015 27071074 33 199 13.5 8.0 10.8 2.8 261 chr3R 27070813 intergenic not near genes chr3R 27070944 intergenic not near genes chr3R 27071074 intergenic not near genes chr3R_33_27070001 chr3R_27070001 RAL-900_125b 3483 chr3R 27077048 27077128 chr3R 27077178 27077227 37 128 9.0 10.5 9.8 3.4 179 chr3R 27077048 intron CG14257 + chr3R 27077138 intron CG14257 + chr3R 27077227 intron CG14257 + chr3R_37_27075001 chr3R_27075001 RAL-900_125b 3484 chr3R 27140472 27140539 chr3R 27148132 27148183 412 26 7658 11.5 10.0 10.8 2.2 7711 chr3R 27140472 intron CG6051 - chr3R 27144328 intron CG6051 - chr3R 27148183 intron CG6051 - chr3R_26_27140001 chr3R_27140001 RAL-900_125b 3485 chr3R 27196239 27196307 chr3R 27196372 27196440 22 133 7.5 6.5 7.0 2.8 201 chr3R 27196239 intergenic not near genes chr3R 27196340 intergenic not near genes chr3R 27196440 intergenic not near genes chr3R_22_27195001 chr3R_27195001 RAL-900_125b 3486 chr3R 27292256 27292307 chr3R 27292392 27292413 18 150 5.0 4.5 4.8 3.1 157 chr3R 27292256 intergenic CG3348 - chr3R 27292334 intergenic CG3348 - chr3R 27292413 intergenic CG3348 - chr3R_18_27290001 chr3R_27290001 RAL-900_125b 3487 chr3R 27300809 27300875 chr3R 27300951 27301017 29 139 3.5 9.5 6.5 3.9 208 chr3R 27300809 intron CG3339 - chr3R 27300913 intron CG3339 - chr3R 27301017 intron CG3339 - chr3R_29_27300001 chr3R_27300001 RAL-900_125b 3488 chr3R 27327385 27327456 chr3R 27327514 27327585 23 124 8.0 8.0 8.0 2.6 200 chr3R 27327385 intergenic not near genes chr3R 27327485 intergenic not near genes chr3R 27327585 intergenic not near genes chr3R_23_27325001 chr3R_27325001 RAL-900_125b 3489 chr3R 27335897 27335939 chr3R 27336028 27336070 11 128 5.0 0.0 2.5 3.1 173 chr3R 27335897 intergenic not near genes chr3R 27335984 intergenic not near genes chr3R 27336070 intergenic not near genes chr3R_11_27335001 chr3R_27335001 RAL-900_125b 3490 chr3R 27342748 27342820 chr3R 27351379 27351451 Tirant 22 8630 9.0 7.5 8.2 2.4 8703 chr3R 27342748 intron CG42534 + chr3R 27347100 intron CG42534 + chr3R 27351451 intron CG42534 + chr3R_22_27345001 chr3R_27345001 RAL-900_125b 3491 chr3R 27396155 27396223 chr3R 27396318 27396386 26 157 6.5 6.0 6.2 3.6 231 chr3R 27396155 intron side - chr3R 27396270 intron side - chr3R 27396386 intron side - chr3R_26_27395001 chr3R_27395001 RAL-900_125b 3492 chr3R 27445209 27445274 chr3R 27445328 27445401 27 121 5.5 9.5 7.5 3.2 192 chr3R 27445209 intergenic not near genes chr3R 27445305 intergenic not near genes chr3R 27445401 intergenic not near genes chr3R_27_27445001 chr3R_27445001 RAL-900_125b 3493 chr3R 27457824 27457851 chr3R 27457964 27457982 13 138 14.0 0.0 7.0 1.6 158 chr3R 27457824 intergenic not near genes chr3R 27457903 intergenic not near genes chr3R 27457982 intergenic not near genes chr3R_13_27455001 chr3R_27455001 RAL-900_125b 3494 chr3R 27457856 27457900 chr3R 27457963 27458031 19 132 6.5 0.0 3.2 4.5 175 chr3R 27457856 intergenic not near genes chr3R 27457944 intergenic not near genes chr3R 27458031 intergenic not near genes chr3R_19_27455001 chr3R_27455001 RAL-900_125b 3495 chr3R 27492329 27492407 chr3R 27492466 27492547 29 137 0.5 3.0 1.8 10.4 218 chr3R 27492329 intergenic not near genes chr3R 27492438 intergenic not near genes chr3R 27492547 intergenic not near genes chr3R_29_27490001 chr3R_27490001 RAL-900_125b 3496 chr3R 27496544 27496601 chr3R 27496699 27496756 29 155 8.5 4.5 6.5 3.9 212 chr3R 27496544 intergenic not near genes chr3R 27496650 intergenic not near genes chr3R 27496756 intergenic not near genes chr3R_29_27495001 chr3R_27495001 RAL-900_125b 3497 chr3R 27521116 27521177 chr3R 27530375 27530436 roo 29 9259 15.5 13.0 14.2 1.9 9320 chr3R 27521116 intron CG12885 + chr3R 27525776 intron CG12885 + chr3R 27530436 intron CG12885 + chr3R_29_27525001 chr3R_27525001 RAL-900_125b 3498 chr3R 27619671 27619729 chr3R 27619819 27619903 22 161 4.5 2.5 3.5 4.9 232 chr3R 27619671 intron Tusp + chr3R 27619787 intron Tusp + chr3R 27619903 intron Tusp + chr3R_22_27615001 chr3R_27615001 RAL-900_125b 3499 chr3R 27705311 27705381 chr3R 27705441 27705511 17 126 7.5 8.0 7.8 1.9 200 chr3R 27705311 exon CG12428 - chr3R 27705411 intron CG12428 - chr3R 27705511 exon CG12428 - chr3R_17_27705001 chr3R_27705001 RAL-900_125b 3500 chr3R 27718526 27718588 chr3R 27718655 27718692 25 127 6.5 4.0 5.2 4.0 166 chr3R 27718526 intergenic not near genes chr3R 27718609 intergenic not near genes chr3R 27718692 intergenic not near genes chr3R_25_27715001 chr3R_27715001 RAL-900_125b 3501 chr3R 27725524 27725531 chr3R 27731016 27731023 I-element 4 5492 21.0 10.0 15.5 0.2 5499 chr3R 27725524 intergenic not near genes chr3R 27728274 intergenic not near genes chr3R 27731023 intergenic not near genes chr3R_4_27725001 chr3R_27725001 RAL-900_125b 3502 chr3R 27725532 27725584 chr3R 27731013 27731076 I-element 21 5491 8.0 10.0 9.0 2.1 5544 chr3R 27725532 intergenic not near genes chr3R 27728304 intergenic not near genes chr3R 27731076 intergenic not near genes chr3R_21_27725001 chr3R_27725001 RAL-900_125b 3503 chr3R 27752719 27752790 chr3R 27753154 27753225 23 434 8.5 8.5 8.5 2.4 506 chr3R 27752719 intergenic not near genes chr3R 27752972 intergenic not near genes chr3R 27753225 intergenic not near genes chr3R_23_27750001 chr3R_27750001 RAL-900_125b 3504 chr3R 27779225 27779255 chr3R 27779352 27779362 6 123 13.0 8.0 10.5 0.5 137 chr3R 27779225 exon CG34353 - chr3R 27779294 exon CG34353 - chr3R 27779362 intron CG34353 - chr3R_6_27775001 chr3R_27775001 RAL-900_125b 3505 chr3R 27779259 27779286 chr3R 27779351 27779413 10 118 9.5 8.5 9.0 1.0 154 chr3R 27779259 exon CG34353 - chr3R 27779336 intron CG34353 - chr3R 27779413 intron CG34353 - chr3R_10_27775001 chr3R_27775001 RAL-900_125b 3506 chr3R 27791601 27791641 chr3R 27794796 27794825 Rt1c 21 3191 13.5 14.0 13.8 1.4 3224 chr3R 27791601 intron CG34353 - chr3R 27793213 intron CG34353 - chr3R 27794825 intron CG34353 - chr3R_21_27790001 chr3R_27790001 RAL-900_125b 3507 chr3R 27799888 27799959 chr3R 27800020 27800091 26 131 5.5 7.0 6.2 3.6 203 chr3R 27799888 intron CG34353 - chr3R 27799990 intron CG34353 - chr3R 27800091 intron CG34353 - chr3R_26_27795001 chr3R_27795001 RAL-900_125b 3508 chr3R 27829859 27829931 chr3R 27829988 27830060 8 129 8.5 3.5 6.0 1.1 201 chr3R 27829859 intron CG34353 - chr3R 27829960 intron CG34353 - chr3R 27830060 intron CG34353 - chr3R_8_27825001 chr3R_27825001 RAL-900_125b 3509 chr3R 27856716 27856730 chr3R 27858249 27858263 hopper2 11 1533 33.5 9.0 21.2 0.5 1547 chr3R 27856716 intron CG34353 - chr3R 27857490 intron CG34353 - chr3R 27858263 intron CG34353 - chr3R_11_27855001 chr3R_27855001 RAL-900_125b 3510 chr3R 27856731 27856780 chr3R 27858248 27858313 hopper2 48 1531 17.0 8.5 12.8 3.5 1582 chr3R 27856731 intron CG34353 - chr3R 27857522 intron CG34353 - chr3R 27858313 intron CG34353 - chr3R_48_27855001 chr3R_27855001 RAL-900_125b 3511 chr3R 27858258 27858322 chr3R 27860041 27860105 30 1783 9.5 46.0 27.8 1.0 1847 chr3R 27858258 intron CG34353 - chr3R 27859182 intron CG34353 - chr3R 27860105 intron CG34353 - chr3R_30_27855001 chr3R_27855001 RAL-900_125b 3512 chr3R 27856462 27856520 chr3R 27860137 27860210 30 3678 53.0 50.0 51.5 0.6 3748 chr3R 27856462 intron CG34353 - chr3R 27858336 intron CG34353 - chr3R 27860210 intron CG34353 - chr3R_30_27855001 chr3R_27855001 RAL-900_125b 3513 chr3R 27862912 27862975 chr3R 27868267 27868330 Transpac 21 5354 11.5 9.5 10.5 1.8 5418 chr3R 27862912 intron CG34353 - chr3R 27865621 intron CG34353 - chr3R 27868330 intron CG34353 - chr3R_21_27865001 chr3R_27865001 RAL-900_125b 3514 chr3R 27871012 27871087 chr3R 27871163 27871217 30 146 3.0 7.0 5.0 5.0 205 chr3R 27871012 intron CG34353 - chr3R 27871114 intron CG34353 - chr3R 27871217 intron CG34353 - chr3R_30_27870001 chr3R_27870001 RAL-900_125b 3515 chr3R 27875659 27875671 chr3R 27882764 27882776 297 7 7105 16.0 11.0 13.5 0.5 7117 chr3R 27875659 intron CG34353 - chr3R 27879218 intron CG34353 - chr3R 27882776 intron CG34353 - chr3R_7_27875001 chr3R_27875001 RAL-900_125b 3516 chr3R 27875673 27875723 chr3R 27882762 27882828 297 22 7104 9.5 11.0 10.2 2.0 7155 chr3R 27875673 intron CG34353 - chr3R 27879250 intron CG34353 - chr3R 27882828 intron CG34353 - chr3R_22_27875001 chr3R_27875001 RAL-900_125b 3517 chr3R 28035445 28035506 chr3R 28035572 28035633 13 126 6.0 6.5 6.2 1.8 188 chr3R 28035445 intron CG34362 + chr3R 28035539 intron CG34362 + chr3R 28035633 intron CG34362 + chr3R_13_28035001 chr3R_28035001 RAL-900_125b 3518 chr3R 28068474 28068515 chr3R 28073966 28074007 I-element 11 5491 0.0 13.0 6.5 1.5 5533 chr3R 28068474 intron CG34362 + chr3R 28071240 intron CG34362 + chr3R 28074007 intron CG34362 + chr3R_11_28070001 chr3R_28070001 RAL-900_125b 3519 chr3R 28099134 28099195 chr3R 28099303 28099364 31 169 5.0 5.5 5.2 5.0 230 chr3R 28099134 intergenic not near genes chr3R 28099249 intergenic not near genes chr3R 28099364 intergenic not near genes chr3R_31_28095001 chr3R_28095001 RAL-900_125b 3520 chr3R 28110129 28110204 chr3R 28110258 28110274 26 125 5.5 6.0 5.8 3.8 145 chr3R 28110129 intergenic not near genes chr3R 28110202 intergenic not near genes chr3R 28110274 intergenic not near genes chr3R_26_28110001 chr3R_28110001 RAL-900_125b 3521 chr3R 28131378 28131458 chr3R 28131611 28131690 22 231 5.0 4.5 4.8 3.8 312 chr3R 28131378 intergenic not near genes chr3R 28131534 intergenic not near genes chr3R 28131690 intergenic not near genes chr3R_22_28130001 chr3R_28130001 RAL-900_125b 3522 chr3R 28152307 28152362 chr3R 28152434 28152489 24 127 13.0 15.5 14.2 1.6 182 chr3R 28152307 intron CG34354 + chr3R 28152398 intron CG34354 + chr3R 28152489 intron CG34354 + chr3R_24_28150001 chr3R_28150001 RAL-900_125b 3523 chr3R 28172957 28172992 chr3R 28173138 28173200 10 205 7.5 9.0 8.2 1.1 243 chr3R 28172957 intron CG34354 + chr3R 28173078 intron CG34354 + chr3R 28173200 intron CG34354 + chr3R_10_28170001 chr3R_28170001 RAL-900_125b 3524 chr3R 28173621 28173695 chr3R 28181101 28181175 mdg1 23 7480 8.5 8.0 8.2 2.5 7554 chr3R 28173621 intron CG34354 + chr3R 28177398 intron CG34354 + chr3R 28181175 intron CG34354 + chr3R_23_28175001 chr3R_28175001 RAL-900_125b 3525 chr3R 28223706 28223780 chr3R 28223846 28223920 35 137 4.0 6.5 5.2 5.6 214 chr3R 28223706 intron CG34354 + chr3R 28223813 intron CG34354 + chr3R 28223920 intron CG34354 + chr3R_35_28220001 chr3R_28220001 RAL-900_125b 3526 chr3R 28253300 28253331 chr3R 28255860 28255865 jockey 9 2553 16.5 11.5 14.0 0.6 2565 chr3R 28253300 intergenic not near genes chr3R 28254582 intergenic not near genes chr3R 28255865 intergenic not near genes chr3R_9_28250001 chr3R_28250001 RAL-900_125b 3527 chr3R 28253332 28253366 chr3R 28255855 28255926 jockey 15 2551 8.0 10.0 9.0 1.5 2594 chr3R 28253332 intergenic not near genes chr3R 28254629 intergenic not near genes chr3R 28255926 intergenic not near genes chr3R_15_28250001 chr3R_28250001 RAL-900_125b 3528 chr3R 28302067 28302125 chr3R 28302556 28302614 jockey 29 488 12.0 17.0 14.5 1.9 547 chr3R 28302067 intergenic not near genes chr3R 28302340 intergenic not near genes chr3R 28302614 intergenic not near genes chr3R_29_28300001 chr3R_28300001 RAL-900_125b 3529 chr3R 28304588 28304656 chr3R 28304725 28304793 38 137 6.0 13.5 9.8 3.5 205 chr3R 28304588 5` UTR CG12516 - chr3R 28304690 intergenic CG12516 - chr3R 28304793 intergenic CG12516 - chr3R_38_28300001 chr3R_28300001 RAL-900_125b 3530 chr3R 28308024 28308075 chr3R 28308151 28308160 16 119 18.0 12.0 15.0 1.0 136 chr3R 28308024 intergenic not near genes chr3R 28308092 intergenic not near genes chr3R 28308160 intergenic not near genes chr3R_16_28305001 chr3R_28305001 RAL-900_125b 3531 chr3R 28327314 28327397 chr3R 28327738 28327821 49 423 3.0 7.0 5.0 8.2 507 chr3R 28327314 intron larp - chr3R 28327568 intron larp - chr3R 28327821 intron larp - chr3R_49_28325001 chr3R_28325001 RAL-900_125b 3532 chr3R 28352466 28352542 chr3R 28352856 28352910 30 388 5.5 10.5 8.0 3.3 444 chr3R 28352466 exon Or98b + chr3R 28352688 exon Or98b + chr3R 28352910 exon Or98b + chr3R_30_28350001 chr3R_28350001 RAL-900_125b 3533 chr3R 28424203 28424270 chr3R 28424332 28424399 29 126 10.0 12.5 11.2 2.4 196 chr3R 28424203 intron beat-VI + chr3R 28424301 intron beat-VI + chr3R 28424399 intron beat-VI + chr3R_29_28420001 chr3R_28420001 RAL-900_125b 3534 chr3R 28425206 28425267 chr3R 28425335 28425396 26 127 4.5 7.5 6.0 3.7 190 chr3R 28425206 intron beat-VI + chr3R 28425301 intron beat-VI + chr3R 28425396 intron beat-VI + chr3R_26_28425001 chr3R_28425001 RAL-900_125b 3535 chr3R 28429410 28429468 chr3R 28429540 28429549 19 125 17.5 3.0 10.2 1.7 139 chr3R 28429410 intron beat-VI + chr3R 28429480 intron beat-VI + chr3R 28429549 intron beat-VI + chr3R_19_28425001 chr3R_28425001 RAL-900_125b 3536 chr3R 28429469 28429641 chr3R 28429537 28429768 42 123 3.0 5.5 4.2 8.1 299 chr3R 28429469 intron beat-VI + chr3R 28429618 intron beat-VI + chr3R 28429768 intron beat-VI + chr3R_42_28425001 chr3R_28425001 RAL-900_125b 3537 chr3R 28454162 28454220 chr3R 28454395 28454433 23 230 14.0 8.5 11.2 1.9 271 chr3R 28454162 intron beat-VI + chr3R 28454298 intron beat-VI + chr3R 28454433 intron beat-VI + chr3R_23_28450001 chr3R_28450001 RAL-900_125b 3538 chr3R 28460740 28460805 chr3R 28460878 28460923 23 135 11.0 7.5 9.2 2.3 183 chr3R 28460740 intron beat-VI + chr3R 28460832 intron beat-VI + chr3R 28460923 intron beat-VI + chr3R_23_28460001 chr3R_28460001 RAL-900_125b 3539 chr3R 28478390 28478443 chr3R 28478521 28478574 24 127 6.5 11.0 8.8 2.4 184 chr3R 28478390 intergenic not near genes chr3R 28478482 intergenic not near genes chr3R 28478574 intergenic not near genes chr3R_24_28475001 chr3R_28475001 RAL-900_125b 3540 chr3R 28479098 28479167 chr3R 28479231 28479300 28 133 7.0 9.0 8.0 3.1 202 chr3R 28479098 intergenic not near genes chr3R 28479199 intergenic not near genes chr3R 28479300 intergenic not near genes chr3R_28_28475001 chr3R_28475001 RAL-900_125b 3541 chr3R 28480295 28480331 chr3R 28480426 28480462 12 131 4.0 9.0 6.5 1.6 167 chr3R 28480295 intergenic not near genes chr3R 28480378 intergenic not near genes chr3R 28480462 intergenic not near genes chr3R_12_28480001 chr3R_28480001 RAL-900_125b 3542 chr3R 28484355 28484375 chr3R 28486222 28486242 31 1868 95.5 159.0 127.2 0.2 1887 chr3R 28484355 intergenic CG1894 + chr3R 28485298 exon CG1894 + chr3R 28486242 intergenic CG1894 + chr3R_31_28485001 chr3R_28485001 RAL-900_125b 3543 chr3R 28484354 28484425 chr3R 28486243 28486292 87 1869 129.5 141.0 135.2 0.6 1938 chr3R 28484354 intergenic CG1894 + chr3R 28485323 exon CG1894 + chr3R 28486292 intergenic CG1894 + chr3R_87_28485001 chr3R_28485001 RAL-900_125b 3544 chr3R 28527640 28527650 chr3R 28527767 28527777 6 126 41.0 59.0 50.0 0.1 137 chr3R 28527640 exon Ppn - chr3R 28527708 exon Ppn - chr3R 28527777 exon Ppn - chr3R_6_28525001 chr3R_28525001 RAL-900_125b 3545 chr3R 28527652 28527666 chr3R 28527748 28527793 8 119 42.0 52.5 47.2 0.2 141 chr3R 28527652 exon Ppn - chr3R 28527722 exon Ppn - chr3R 28527793 exon Ppn - chr3R_8_28525001 chr3R_28525001 RAL-900_125b 3546 chr3R 28599333 28599387 chr3R 28599530 28599584 23 196 7.5 8.5 8.0 2.6 251 chr3R 28599333 intergenic Noa36 - chr3R 28599458 intergenic Noa36 - chr3R 28599584 intergenic Noa36 - chr3R_23_28595001 chr3R_28595001 RAL-900_125b 3547 chr3R 28599388 28599401 chr3R 28599524 28599598 9 190 7.0 8.0 7.5 1.1 210 chr3R 28599388 intergenic Noa36 - chr3R 28599493 intergenic Noa36 - chr3R 28599598 intergenic Noa36 - chr3R_9_28595001 chr3R_28595001 RAL-900_125b 3548 chr3R 28670599 28670648 chr3R 28670734 28670784 27 134 3.5 13.5 8.5 2.8 185 chr3R 28670599 intergenic CG9989 +,CG33346 + chr3R 28670692 intergenic CG9989 +,CG33346 + chr3R 28670784 intron CG9989 + chr3R_27_28670001 chr3R_28670001 RAL-900_125b 3549 chr3R 28736876 28736902 chr3R 28737144 28737170 13 268 7.0 17.0 12.0 1.0 294 chr3R 28736876 intergenic AstA-R2 - chr3R 28737023 intergenic AstA-R2 - chr3R 28737170 3` UTR AstA-R2 - chr3R_13_28735001 chr3R_28735001 RAL-900_125b 3550 chr3R 28747975 28747982 chr3R 28748107 28748109 5 131 20.5 9.5 15.0 0.3 134 chr3R 28747975 intergenic CG10000 - chr3R 28748042 intergenic CG10000 - chr3R 28748109 intergenic CG10000 - chr3R_5_28745001 chr3R_28745001 RAL-900_125b 3551 chr3R 28747987 28748047 chr3R 28748104 28748149 21 127 7.0 9.0 8.0 2.3 162 chr3R 28747987 intergenic CG10000 - chr3R 28748068 intergenic CG10000 - chr3R 28748149 intergenic CG10000 - chr3R_21_28745001 chr3R_28745001 RAL-900_125b 3552 chr3R 28758250 28758255 chr3R 28763917 28763922 roo 4 5667 18.5 0.5 9.5 0.4 5672 chr3R 28758250 intergenic aqrs - chr3R 28761086 intergenic not near genes chr3R 28763922 intergenic not near genes chr3R_4_28760001 chr3R_28760001 RAL-900_125b 3553 chr3R 28758272 28758318 chr3R 28771329 28771375 Stalker4 23 13057 8.0 0.0 4.0 4.6 13103 chr3R 28758272 intergenic aqrs - chr3R 28764824 intergenic not near genes chr3R 28771375 intergenic not near genes chr3R_23_28760001 chr3R_28760001 RAL-900_125b 3554 chr3R 28792819 28792898 chr3R 28797964 28798043 jockey 28 5137 5.5 12.5 9.0 2.8 5224 chr3R 28792819 intergenic not near genes chr3R 28795431 intergenic not near genes chr3R 28798043 intergenic not near genes chr3R_28_28795001 chr3R_28795001 RAL-900_125b 3555 chr3R 21907534 21907536 chr3R 28831801 28831802 59 6924266 35.0 37.0 36.0 1.6 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_59_25365001 chr3R_25365001 RAL-900_125b 3556 chr3R 28850707 28850754 chr3R 28850837 28850884 17 129 7.5 13.5 10.5 1.5 177 chr3R 28850707 intron spg + chr3R 28850796 intron spg + chr3R 28850884 intron spg + chr3R_17_28850001 chr3R_28850001 RAL-900_125b 3557 chr3R 28853337 28853409 chr3R 28853463 28853535 24 126 6.5 8.5 7.5 2.8 198 chr3R 28853337 intron spg + chr3R 28853436 intron spg + chr3R 28853535 intron spg + chr3R_24_28850001 chr3R_28850001 RAL-900_125b 3558 chr3R 28944951 28944995 chr3R 28945481 28945505 21 526 7.0 12.0 9.5 2.0 554 chr3R 28944951 intron CG14521 - chr3R 28945228 intron CG14521 - chr3R 28945505 intron CG14521 - chr3R_21_28945001 chr3R_28945001 RAL-900_125b 3559 chr3R 28985017 28985088 chr3R 28985169 28985242 22 153 7.5 5.0 6.2 3.1 225 chr3R 28985017 intergenic not near genes chr3R 28985130 intergenic not near genes chr3R 28985242 intergenic not near genes chr3R_22_28985001 chr3R_28985001 RAL-900_125b 3560 chr3R 28986241 28986295 chr3R 28986368 28986415 17 121 19.0 17.5 18.2 0.9 174 chr3R 28986241 intergenic not near genes chr3R 28986328 intergenic not near genes chr3R 28986415 intergenic not near genes chr3R_17_28985001 chr3R_28985001 RAL-900_125b 3561 chr3R 29006843 29006866 chr3R 29006970 29006978 6 124 10.0 10.5 10.2 0.5 135 chr3R 29006843 intron wat - chr3R 29006910 intron wat - chr3R 29006978 intron wat - chr3R_6_29005001 chr3R_29005001 RAL-900_125b 3562 chr3R 29047312 29047362 chr3R 29047441 29047491 16 129 7.0 12.0 9.5 1.5 179 chr3R 29047312 3` UTR Pkc98E + chr3R 29047402 3` UTR Pkc98E + chr3R 29047491 3` UTR Pkc98E + chr3R_16_29045001 chr3R_29045001 RAL-900_125b 3563 chr3R 29054152 29054174 chr3R 29054280 29054302 11 128 1.5 8.0 4.8 1.9 150 chr3R 29054152 intergenic CG11843 +,CG11842 + chr3R 29054227 intergenic CG11843 +,CG11842 + chr3R 29054302 intergenic CG11843 +,CG11842 + chr3R_11_29050001 chr3R_29050001 RAL-900_125b 3564 chr3R 29070004 29070078 chr3R 29070135 29070154 42 130 8.5 9.5 9.0 4.2 150 chr3R 29070004 intron CG11873 + chr3R 29070079 intron CG11873 + chr3R 29070154 intron CG11873 + chr3R_42_29070001 chr3R_29070001 RAL-900_125b 3565 chr3R 29079390 29079405 chr3R 29080812 29080827 NOF 12 1422 1.0 15.0 8.0 1.3 1437 chr3R 29079390 intron CG11873 + chr3R 29080108 intron CG11873 + chr3R 29080827 intron CG11873 + chr3R_12_29080001 chr3R_29080001 RAL-900_125b 3566 chr3R 29091394 29091438 chr3R 29091531 29091546 15 128 7.5 12.0 9.8 1.4 152 chr3R 29091394 intron CG11873 + chr3R 29091470 intron CG11873 + chr3R 29091546 intron CG11873 + chr3R_15_29090001 chr3R_29090001 RAL-900_125b 3567 chr3R 29151919 29151958 chr3R 29152061 29152100 16 140 9.0 16.5 12.8 1.2 181 chr3R 29151919 intergenic ligatin -,Slbp - chr3R 29152010 intergenic Slbp -,ligatin - chr3R 29152100 3` UTR Slbp - chr3R_16_29150001 chr3R_29150001 RAL-900_125b 3568 chr3R 29182501 29182591 chr3R 29182641 29182717 23 134 0.5 7.5 4.0 4.6 216 chr3R 29182501 intron CG14509 - chr3R 29182609 intron CG14509 - chr3R 29182717 intron CG14509 - chr3R_23_29180001 chr3R_29180001 RAL-900_125b 3569 chr3R 29213018 29213092 chr3R 29213151 29213225 38 132 6.0 6.0 6.0 5.4 207 chr3R 29213018 intergenic not near genes chr3R 29213122 intergenic not near genes chr3R 29213225 intergenic not near genes chr3R_38_29210001 chr3R_29210001 RAL-900_125b 3570 chr3R 29237225 29237278 chr3R 29239296 29239341 27 2068 43.5 9.5 26.5 1.0 2116 chr3R 29237225 exon CG11951 - chr3R 29238283 intron CG11951 - chr3R 29239341 exon CG31427 - chr3R_27_29235001 chr3R_29235001 RAL-900_125b 3571 chr3R 29238726 29238787 chr3R 29238890 29238951 30 163 7.0 11.5 9.2 2.9 225 chr3R 29238726 intergenic CG11951 -,CG31427 - chr3R 29238838 3` UTR CG31427 - chr3R 29238951 3` UTR CG31427 - chr3R_30_29235001 chr3R_29235001 RAL-900_125b 3572 chr3R 29239199 29239212 chr3R 29245537 29245553 4 6340 0.5 42.0 21.2 0.2 6354 chr3R 29239199 exon CG31427 - chr3R 29242376 exon CG31445 - chr3R 29245553 exon SP1029 - chr3R_4_29240001 chr3R_29240001 RAL-900_125b 3573 chr3R 29239218 29239242 chr3R 29245535 29245573 13 6334 7.5 41.5 24.5 0.5 6355 chr3R 29239218 exon CG31427 - chr3R 29242396 exon CG31445 - chr3R 29245573 exon SP1029 - chr3R_13_29240001 chr3R_29240001 RAL-900_125b 3574 chr3R 29237522 29237535 chr3R 29239380 29239425 15 1861 42.5 10.5 26.5 0.5 1903 chr3R 29237522 exon CG11951 - chr3R 29238474 intron CG11951 - chr3R 29239425 exon CG31427 - chr3R_15_29235001 chr3R_29235001 RAL-900_125b 3575 chr3R 29240423 29240500 chr3R 29240554 29240634 22 134 5.5 6.0 5.8 3.2 211 chr3R 29240423 intergenic CG31427 -,CG31445 - chr3R 29240528 intergenic CG31445 -,CG31427 - chr3R 29240634 3` UTR CG31445 - chr3R_22_29240001 chr3R_29240001 RAL-900_125b 3576 chr3R 29249900 29249906 chr3R 29250039 29250045 6 139 0.0 14.5 7.2 0.7 145 chr3R 29249900 intron SP1029 - chr3R 29249972 intron SP1029 - chr3R 29250045 intron SP1029 - chr3R_6_29245001 chr3R_29245001 RAL-900_125b 3577 chr3R 29256221 29256296 chr3R 29256351 29256426 27 127 5.0 7.5 6.2 3.8 205 chr3R 29256221 intergenic CG45544 +,stg - chr3R 29256324 intergenic CG45544 + chr3R 29256426 intergenic CG45544 + chr3R_27_29255001 chr3R_29255001 RAL-900_125b 3578 chr3R 29282758 29282815 chr3R 29282894 29282951 22 136 8.0 15.0 11.5 1.8 193 chr3R 29282758 intergenic not near genes chr3R 29282854 intergenic not near genes chr3R 29282951 intergenic not near genes chr3R_22_29280001 chr3R_29280001 RAL-900_125b 3579 chr3R 29319772 29319851 chr3R 29320141 29320220 jockey 29 368 10.0 8.5 9.2 2.8 448 chr3R 29319772 intergenic Cnx99A - chr3R 29319996 intergenic Cnx99A - chr3R 29320220 intergenic not near genes chr3R_29_29315001 chr3R_29315001 RAL-900_125b 3580 chr3R 29330885 29330900 chr3R 29331011 29331026 8 126 7.5 5.0 6.2 1.1 141 chr3R 29330885 intergenic not near genes chr3R 29330956 intergenic not near genes chr3R 29331026 intergenic not near genes chr3R_8_29330001 chr3R_29330001 RAL-900_125b 3581 chr3R 29351731 29351754 chr3R 29351866 29351889 8 134 4.0 14.5 9.2 0.8 158 chr3R 29351731 intergenic not near genes chr3R 29351810 intergenic not near genes chr3R 29351889 intergenic not near genes chr3R_8_29350001 chr3R_29350001 RAL-900_125b 3582 chr3R 29356015 29356078 chr3R 29356147 29356209 24 131 1.0 14.5 7.8 2.7 194 chr3R 29356015 intergenic CR45547 - chr3R 29356112 intergenic CR45547 - chr3R 29356209 3` UTR CR45547 - chr3R_24_29355001 chr3R_29355001 RAL-900_125b 3583 chr3R 29358973 29358986 chr3R 29359098 29359113 4 126 20.0 8.5 14.2 0.3 140 chr3R 29358973 intergenic not near genes chr3R 29359043 intergenic not near genes chr3R 29359113 intergenic not near genes chr3R_4_29355001 chr3R_29355001 RAL-900_125b 3584 chr3R 29358988 29359000 chr3R 29359096 29359127 5 123 15.0 8.0 11.5 0.4 139 chr3R 29358988 intergenic not near genes chr3R 29359058 intergenic not near genes chr3R 29359127 intergenic not near genes chr3R_5_29355001 chr3R_29355001 RAL-900_125b 3585 chr3R 29359004 29359012 chr3R 29359086 29359086 6 96 14.0 10.0 12.0 0.5 82 chr3R 29359004 intergenic not near genes chr3R 29359045 intergenic not near genes chr3R 29359086 intergenic not near genes chr3R_6_29355001 chr3R_29355001 RAL-900_125b 3586 chr3R 29359013 29359043 chr3R 29359085 29359140 16 107 11.0 10.5 10.8 1.4 127 chr3R 29359013 intergenic not near genes chr3R 29359076 intergenic not near genes chr3R 29359140 intergenic not near genes chr3R_16_29355001 chr3R_29355001 RAL-900_125b 3587 chr3R 29364108 29364139 chr3R 29364466 29364497 13 358 6.5 17.0 11.8 1.0 389 chr3R 29364108 intergenic not near genes chr3R 29364302 intergenic not near genes chr3R 29364497 intergenic not near genes chr3R_13_29360001 chr3R_29360001 RAL-900_125b 3588 chr3R 29376310 29376365 chr3R 29376448 29376503 26 138 6.0 0.0 3.0 6.5 193 chr3R 29376310 intergenic not near genes chr3R 29376406 intergenic not near genes chr3R 29376503 intergenic not near genes chr3R_26_29375001 chr3R_29375001 RAL-900_125b 3589 chr3R 29384141 29384182 chr3R 29384261 29384309 11 124 12.5 7.5 10.0 1.0 168 chr3R 29384141 intron Ptp99A + chr3R 29384225 intron Ptp99A + chr3R 29384309 intron Ptp99A + chr3R_11_29380001 chr3R_29380001 RAL-900_125b 3590 chr3R 29402933 29403005 chr3R 29403078 29403150 37 144 7.0 10.5 8.8 3.8 217 chr3R 29402933 intron Ptp99A + chr3R 29403042 intron Ptp99A + chr3R 29403150 intron Ptp99A + chr3R_37_29400001 chr3R_29400001 RAL-900_125b 3591 chr3R 29406577 29406629 chr3R 29407913 29407965 jockey 12 1332 10.5 11.0 10.8 1.0 1388 chr3R 29406577 intron Ptp99A + chr3R 29407271 intron Ptp99A + chr3R 29407965 intron Ptp99A + chr3R_12_29405001 chr3R_29405001 RAL-900_125b 3592 chr3R 29447776 29447844 chr3R 29447933 29448001 28 152 6.5 4.5 5.5 4.3 225 chr3R 29447776 intron Ptp99A + chr3R 29447888 intron Ptp99A + chr3R 29448001 intron Ptp99A + chr3R_28_29445001 chr3R_29445001 RAL-900_125b 3593 chr3R 29449317 29449384 chr3R 29449445 29449512 28 128 12.0 14.5 13.2 2.0 195 chr3R 29449317 intron Ptp99A + chr3R 29449414 intron Ptp99A + chr3R 29449512 intron Ptp99A + chr3R_28_29445001 chr3R_29445001 RAL-900_125b 3594 chr3R 29452107 29452179 chr3R 29452234 29452306 23 119 10.5 3.0 6.8 2.9 199 chr3R 29452107 intron Ptp99A + chr3R 29452206 intron Ptp99A + chr3R 29452306 intron Ptp99A + chr3R_23_29450001 chr3R_29450001 RAL-900_125b 3595 chr3R 29464979 29465001 chr3R 29465545 29465568 5 567 18.0 0.0 9.0 0.5 589 chr3R 29464979 intron Ptp99A + chr3R 29465274 intron Ptp99A + chr3R 29465568 intron Ptp99A + chr3R_5_29465001 chr3R_29465001 RAL-900_125b 3596 chr3R 29465002 29465028 chr3R 29465544 29465577 9 557 9.5 0.0 4.8 1.6 575 chr3R 29465002 intron Ptp99A + chr3R 29465290 intron Ptp99A + chr3R 29465577 intron Ptp99A + chr3R_9_29465001 chr3R_29465001 RAL-900_125b 3597 chr3R 29471968 29472027 chr3R 29472111 29472166 18 140 8.5 9.5 9.0 1.8 198 chr3R 29471968 intron Ptp99A + chr3R 29472067 intron Ptp99A + chr3R 29472166 intron Ptp99A + chr3R_18_29470001 chr3R_29470001 RAL-900_125b 3598 chr3R 29505850 29505919 chr3R 29505977 29506046 19 126 5.0 7.5 6.2 2.6 196 chr3R 29505850 intergenic not near genes chr3R 29505948 intergenic not near genes chr3R 29506046 intergenic not near genes chr3R_19_29505001 chr3R_29505001 RAL-900_125b 3599 chr3R 29518261 29518333 chr3R 29518390 29518462 31 128 4.5 9.0 6.8 4.0 201 chr3R 29518261 intergenic not near genes chr3R 29518362 intergenic not near genes chr3R 29518462 intergenic not near genes chr3R_31_29515001 chr3R_29515001 RAL-900_125b 3600 chr3R 29538005 29538158 chr3R 29538134 29538288 11 139 0.0 0.0 0.0 11.0 283 chr3R 29538005 intergenic not near genes chr3R 29538146 intergenic not near genes chr3R 29538288 intergenic not near genes chr3R_11_29535001 chr3R_29535001 RAL-900_125b 3601 chr3R 29539385 29539411 chr3R 29539506 29539537 10 125 17.5 1.5 9.5 1.0 152 chr3R 29539385 intergenic not near genes chr3R 29539461 intergenic not near genes chr3R 29539537 intergenic not near genes chr3R_10_29535001 chr3R_29535001 RAL-900_125b 3602 chr3R 29561079 29561145 chr3R 29561322 29561387 26 242 7.0 10.5 8.8 2.7 308 chr3R 29561079 intron Dr + chr3R 29561233 intron Dr + chr3R 29561387 intron Dr + chr3R_26_29560001 chr3R_29560001 RAL-900_125b 3603 chr3R 29576718 29577007 chr3R 29576869 29577095 30 136 10.5 4.0 7.2 3.7 377 chr3R 29576718 intergenic not near genes chr3R 29576906 intergenic not near genes chr3R 29577095 intergenic not near genes chr3R_30_29575001 chr3R_29575001 RAL-900_125b 3604 chr3R 29590326 29590397 chr3R 29590469 29590540 26 143 6.0 6.5 6.2 3.6 214 chr3R 29590326 exon CG31041 - chr3R 29590433 intron CG31041 - chr3R 29590540 exon CG31041 - chr3R_26_29590001 chr3R_29590001 RAL-900_125b 3605 chr3R 29627241 29627315 chr3R 29627698 29627755 19 456 10.0 9.5 9.8 1.8 514 chr3R 29627241 intergenic not near genes chr3R 29627498 intergenic not near genes chr3R 29627755 intergenic not near genes chr3R_19_29625001 chr3R_29625001 RAL-900_125b 3606 chr3R 29648961 29648995 chr3R 29649101 29649125 18 139 7.0 10.5 8.8 1.8 164 chr3R 29648961 intron Dop1R2 - chr3R 29649043 intron Dop1R2 - chr3R 29649125 intron Dop1R2 - chr3R_18_29645001 chr3R_29645001 RAL-900_125b 3607 chr3R 29649002 29649011 chr3R 29649100 29649151 5 132 5.0 10.0 7.5 0.6 149 chr3R 29649002 intron Dop1R2 - chr3R 29649076 intron Dop1R2 - chr3R 29649151 intron Dop1R2 - chr3R_5_29645001 chr3R_29645001 RAL-900_125b 3608 chr3R 29655602 29655678 chr3R 29655731 29655807 15 129 7.0 5.0 6.0 2.1 205 chr3R 29655602 intron Dop1R2 - chr3R 29655704 intron Dop1R2 - chr3R 29655807 intron Dop1R2 - chr3R_15_29655001 chr3R_29655001 RAL-900_125b 3609 chr3R 29702128 29702162 chr3R 29702261 29702291 14 133 6.0 0.0 3.0 3.5 163 chr3R 29702128 intergenic not near genes chr3R 29702210 intergenic not near genes chr3R 29702291 intergenic not near genes chr3R_14_29700001 chr3R_29700001 RAL-900_125b 3610 chr3R 29719094 29719386 chr3R 29719227 29719512 48 132 14.5 5.0 9.8 4.4 418 chr3R 29719094 5` UTR CG15506 + chr3R 29719303 intron CG15506 + chr3R 29719512 intron CG15506 + chr3R_48_29715001 chr3R_29715001 RAL-900_125b 3611 chr3R 29719397 29719429 chr3R 29719488 29719565 11 131 5.0 6.5 5.8 1.6 168 chr3R 29719397 intron CG15506 + chr3R 29719481 intron CG15506 + chr3R 29719565 intron CG15506 + chr3R_11_29715001 chr3R_29715001 RAL-900_125b 3612 chr3R 29738222 29738293 chr3R 29739739 29739810 hobo 30 1515 6.5 10.5 8.5 3.2 1588 chr3R 29738222 intergenic CG1969 +,CG7598 + chr3R 29739016 intron CG1969 + chr3R 29739810 5` UTR CG1969 + chr3R_30_29735001 chr3R_29735001 RAL-900_125b 3613 chr3R 29754915 29754990 chr3R 29755043 29755117 23 128 4.0 5.5 4.8 4.0 202 chr3R 29754915 intergenic CR44953 -,yata + chr3R 29755016 intergenic CR44953 -,yata + chr3R 29755117 intergenic CR44953 - chr3R_23_29755001 chr3R_29755001 RAL-900_125b 3614 chr3R 29758895 29758964 chr3R 29759023 29759092 25 125 8.0 9.0 8.5 2.6 197 chr3R 29758895 3` UTR CR44953 - chr3R 29758994 3` UTR CR44953 - chr3R 29759092 intergenic CR44953 - chr3R_25_29755001 chr3R_29755001 RAL-900_125b 3615 chr3R 29760317 29760381 chr3R 29761568 29761632 pogo 27 1251 9.5 8.5 9.0 2.7 1315 chr3R 29760317 intergenic not near genes chr3R 29760974 intergenic not near genes chr3R 29761632 intergenic not near genes chr3R_27_29760001 chr3R_29760001 RAL-900_125b 3616 chr3R 29880539 29880617 chr3R 29880674 29880701 26 128 4.5 12.0 8.2 2.8 162 chr3R 29880539 intron CG31038 + chr3R 29880620 intron CG31038 + chr3R 29880701 intron CG31038 + chr3R_26_29880001 chr3R_29880001 RAL-900_125b 3617 chr3R 29881976 29882044 chr3R 29891183 29891251 roo 30 9207 7.0 10.0 8.5 3.2 9275 chr3R 29881976 intron CG31038 + chr3R 29886614 intron CG31038 + chr3R 29891251 intron CG31038 + chr3R_30_29885001 chr3R_29885001 RAL-900_125b 3618 chr3R 29900113 29900162 chr3R 29900234 29900293 20 119 12.5 19.0 15.8 1.2 180 chr3R 29900113 intron CG31038 + chr3R 29900203 intron CG31038 + chr3R 29900293 intron CG31038 + chr3R_20_29900001 chr3R_29900001 RAL-900_125b 3619 chr3R 29923609 29923668 chr3R 29925406 29925465 42 1798 44.0 78.5 61.2 0.7 1856 chr3R 29923609 intergenic Jon99Cii -,Jon99Ciii + chr3R 29924537 exon Jon99Cii - chr3R 29925465 exon Jon99Ci - chr3R_42_29920001 chr3R_29920001 RAL-900_125b 3620 chr3R 29923608 29923685 chr3R 29925466 29925482 14 1801 47.0 58.0 52.5 0.3 1874 chr3R 29923608 intergenic Jon99Cii -,Jon99Ciii + chr3R 29924545 exon Jon99Cii - chr3R 29925482 exon Jon99Ci - chr3R_14_29920001 chr3R_29920001 RAL-900_125b 3621 chr3R 29950524 29950593 chr3R 29950651 29950678 23 119 6.0 10.0 8.0 2.6 154 chr3R 29950524 intergenic TkR99D - chr3R 29950601 intergenic TkR99D - chr3R 29950678 intergenic TkR99D - chr3R_23_29950001 chr3R_29950001 RAL-900_125b 3622 chr3R 29982438 29982472 chr3R 29982567 29982603 13 124 13.0 5.5 9.2 1.3 165 chr3R 29982438 intergenic not near genes chr3R 29982520 intergenic not near genes chr3R 29982603 intergenic not near genes chr3R_13_29980001 chr3R_29980001 RAL-900_125b 3623 chr3R 30025228 30025309 chr3R 30025354 30025435 9 126 4.5 7.5 6.0 1.3 207 chr3R 30025228 intron Axn + chr3R 30025332 intron Axn + chr3R 30025435 intron Axn + chr3R_9_30025001 chr3R_30025001 RAL-900_125b 3624 chr3R 30030383 30030461 chr3R 30030518 30030594 23 131 2.5 6.5 4.5 4.2 211 chr3R 30030383 intron Axn + chr3R 30030488 intron Axn + chr3R 30030594 intron Axn + chr3R_23_30030001 chr3R_30030001 RAL-900_125b 3625 chr3R 30032119 30032131 chr3R 30032248 30032255 6 128 25.5 14.0 19.8 0.3 136 chr3R 30032119 intron Axn + chr3R 30032187 intron Axn + chr3R 30032255 intron Axn + chr3R_6_30030001 chr3R_30030001 RAL-900_125b 3626 chr3R 30059347 30059425 chr3R 30059483 30059560 21 135 10.5 0.5 5.5 3.2 213 chr3R 30059347 intron sima + chr3R 30059454 intron sima + chr3R 30059560 intron sima + chr3R_21_30055001 chr3R_30055001 RAL-900_125b 3627 chr3R 30065284 30065300 chr3R 30065447 30065463 5 163 18.5 12.5 15.5 0.3 179 chr3R 30065284 intron sima + chr3R 30065374 intron sima + chr3R 30065463 intron sima + chr3R_5_30065001 chr3R_30065001 RAL-900_125b 3628 chr3R 30084808 30084861 chr3R 30086326 30086378 hobo 21 1516 1.5 9.5 5.5 3.2 1570 chr3R 30084808 intron sima + chr3R 30085593 intron sima + chr3R 30086378 intron sima + chr3R_21_30085001 chr3R_30085001 RAL-900_125b 3629 chr3R 30084862 30084873 chr3R 30086323 30086390 hobo 7 1509 1.5 9.5 5.5 1.1 1528 chr3R 30084862 intron sima + chr3R 30085626 intron sima + chr3R 30086390 intron sima + chr3R_7_30085001 chr3R_30085001 RAL-900_125b 3630 chr3R 30097587 30097655 chr3R 30097776 30097844 38 187 2.0 12.0 7.0 4.8 257 chr3R 30097587 intron sima + chr3R 30097716 intron sima + chr3R 30097844 intron sima + chr3R_38_30095001 chr3R_30095001 RAL-900_125b 3631 chr3R 30112909 30112986 chr3R 30113035 30113100 43 125 9.0 8.0 8.5 4.5 191 chr3R 30112909 intron sima + chr3R 30113004 intron sima + chr3R 30113100 intron sima + chr3R_43_30110001 chr3R_30110001 RAL-900_125b 3632 chr3R 30132776 30132848 chr3R 30132914 30132986 34 137 11.0 8.0 9.5 3.2 210 chr3R 30132776 intergenic Tpi -,CG31029 - chr3R 30132881 intergenic Tpi -,CG31029 - chr3R 30132986 3` UTR Tpi - chr3R_34_30130001 chr3R_30130001 RAL-900_125b 3633 chr3R 30170646 30170680 chr3R 30170772 30170806 9 125 7.0 5.0 6.0 1.3 160 chr3R 30170646 exon CG31028 - chr3R 30170726 intron CG31028 - chr3R 30170806 intron CG31028 - chr3R_9_30170001 chr3R_30170001 RAL-900_125b 3634 chr3R 30175650 30175724 chr3R 30175786 30175860 34 136 8.0 15.0 11.5 2.7 210 chr3R 30175650 intergenic CG1983 - chr3R 30175755 intergenic CG1983 - chr3R 30175860 3` UTR CG1983 - chr3R_34_30175001 chr3R_30175001 RAL-900_125b 3635 chr3R 30181063 30181089 chr3R 30181188 30181203 7 122 18.0 13.0 15.5 0.4 140 chr3R 30181063 3` UTR Bet5 + chr3R 30181133 3` UTR Bet5 + chr3R 30181203 3` UTR Bet5 + chr3R_7_30180001 chr3R_30180001 RAL-900_125b 3636 chr3R 30181091 30181128 chr3R 30181176 30181255 15 110 9.0 14.0 11.5 1.2 164 chr3R 30181091 3` UTR Bet5 + chr3R 30181173 3` UTR Bet5 + chr3R 30181255 3` UTR Bet5 + chr3R_15_30180001 chr3R_30180001 RAL-900_125b 3637 chr3R 30183164 30183236 chr3R 30183323 30183395 39 159 10.5 6.5 8.5 4.1 231 chr3R 30183164 intergenic not near genes chr3R 30183280 intergenic not near genes chr3R 30183395 intergenic CR44262 - chr3R_39_30180001 chr3R_30180001 RAL-900_125b 3638 chr3R 30203341 30203373 chr3R 30203470 30203502 15 128 9.5 7.0 8.2 1.6 161 chr3R 30203341 intergenic CG9743 - chr3R 30203422 intergenic CG9743 - chr3R 30203502 intergenic not near genes chr3R_15_30200001 chr3R_30200001 RAL-900_125b 3639 chr3R 30210530 30210669 chr3R 30210670 30210799 4 132 0.0 0.0 0.0 4.0 269 chr3R 30210530 intergenic Anp +,CecA1 + chr3R 30210664 intergenic CecA1 +,Anp + chr3R 30210799 intergenic CecA1 +,Anp + chr3R_4_30210001 chr3R_30210001 RAL-900_125b 3640 chr3R 30212615 30212647 chr3R 30212744 30212776 10 129 12.0 1.5 6.8 1.3 161 chr3R 30212615 intergenic CecA2 + chr3R 30212696 intergenic CecA2 + chr3R 30212776 intergenic CecA2 + chr3R_10_30210001 chr3R_30210001 RAL-900_125b 3641 chr3R 30224338 30224394 chr3R 30224481 30224537 26 140 7.5 4.0 5.8 3.8 199 chr3R 30224338 intergenic not near genes chr3R 30224438 intergenic not near genes chr3R 30224537 intergenic not near genes chr3R_26_30220001 chr3R_30220001 RAL-900_125b 3642 chr3R 30238726 30238788 chr3R 30239939 30240002 1360 32 1212 10.0 14.0 12.0 2.5 1276 chr3R 30238726 intergenic not near genes chr3R 30239364 intergenic not near genes chr3R 30240002 intergenic not near genes chr3R_32_30235001 chr3R_30235001 RAL-900_125b 3643 chr3R 30317279 30317352 chr3R 30324920 30324994 roo 19 7638 5.0 1.0 3.0 4.8 7715 chr3R 30317279 intron hdc + chr3R 30321136 intron hdc + chr3R 30324994 intron hdc + chr3R_19_30320001 chr3R_30320001 RAL-900_125b 3644 chr3R 30375495 30375572 chr3R 30383168 30383236 412 36 7672 3.5 5.5 4.5 6.5 7741 chr3R 30375495 intergenic not near genes chr3R 30379366 intergenic not near genes chr3R 30383236 intergenic not near genes chr3R_36_30375001 chr3R_30375001 RAL-900_125b 3645 chr3R 30396178 30396242 chr3R 30404494 30404523 roo 19 8313 8.5 13.0 10.8 1.6 8345 chr3R 30396178 intergenic not near genes chr3R 30400350 intergenic not near genes chr3R 30404523 5` UTR CR45570 + chr3R_19_30400001 chr3R_30400001 RAL-900_125b 3646 chr3R 30438384 30438462 chr3R 30438511 30438589 25 124 7.5 8.5 8.0 2.8 205 chr3R 30438384 intron CG15537 - chr3R 30438486 intron CG15537 - chr3R 30438589 intron CG15537 - chr3R_25_30435001 chr3R_30435001 RAL-900_125b 3647 chr3R 30448147 30448220 chr3R 30448276 30448349 33 128 7.5 11.0 9.2 3.2 202 chr3R 30448147 intron aralar1 - chr3R 30448248 intron aralar1 - chr3R 30448349 exon aralar1 - chr3R_33_30445001 chr3R_30445001 RAL-900_125b 3648 chr3R 30451853 30451932 chr3R 30452091 30452124 29 236 6.0 0.0 3.0 7.2 271 chr3R 30451853 intron aralar1 - chr3R 30451988 intron aralar1 - chr3R 30452124 intron aralar1 - chr3R_29_30450001 chr3R_30450001 RAL-900_125b 3649 chr3R 30456356 30456424 chr3R 30456487 30456535 40 130 8.5 10.0 9.2 3.9 179 chr3R 30456356 intergenic CG2224 -,aralar1 - chr3R 30456446 3` UTR CG2224 - chr3R 30456535 3` UTR CG2224 - chr3R_40_30455001 chr3R_30455001 RAL-900_125b 3650 chr3R 30461447 30461461 chr3R 30461613 30461628 7 167 15.0 7.0 11.0 0.6 181 chr3R 30461447 intron CDase + chr3R 30461538 intron CDase + chr3R 30461628 intron CDase + chr3R_7_30460001 chr3R_30460001 RAL-900_125b 3651 chr3R 30461462 30461518 chr3R 30461610 30461685 19 165 11.0 6.5 8.8 1.9 223 chr3R 30461462 intron CDase + chr3R 30461574 intron CDase + chr3R 30461685 intron CDase + chr3R_19_30460001 chr3R_30460001 RAL-900_125b 3652 chr3R 30466654 30466728 chr3R 30466784 30466847 36 126 6.5 7.5 7.0 4.5 193 chr3R 30466654 intron PH4alphaEFB + chr3R 30466750 intron PH4alphaEFB + chr3R 30466847 intron PH4alphaEFB + chr3R_36_30465001 chr3R_30465001 RAL-900_125b 3653 chr3R 30480438 30480505 chr3R 30482951 30483023 jockey 40 2513 9.5 7.0 8.2 4.3 2585 chr3R 30480438 intron PH4alphaEFB + chr3R 30481730 intron PH4alphaEFB + chr3R 30483023 intron PH4alphaEFB + chr3R_40_30480001 chr3R_30480001 RAL-900_125b 3654 chr3R 30484989 30485066 chr3R 30485115 30485192 39 126 5.0 4.5 4.8 6.7 203 chr3R 30484989 intron PH4alphaEFB + chr3R 30485090 intron PH4alphaEFB + chr3R 30485192 intron PH4alphaEFB + chr3R_39_30485001 chr3R_30485001 RAL-900_125b 3655 chr3R 30529835 30529903 chr3R 30529972 30530046 35 139 10.5 12.0 11.2 2.9 211 chr3R 30529835 intron CR45552 - chr3R 30529940 intron CR45552 - chr3R 30530046 intron CR45552 - chr3R_35_30525001 chr3R_30525001 RAL-900_125b 3656 chr3R 30548269 30548322 chr3R 30548397 30548450 25 128 13.5 15.0 14.2 1.6 181 chr3R 30548269 intron tmod + chr3R 30548360 intron tmod + chr3R 30548450 intron tmod + chr3R_25_30545001 chr3R_30545001 RAL-900_125b 3657 chr3R 30587459 30587529 chr3R 30587625 30587696 24 158 6.0 10.5 8.2 2.6 237 chr3R 30587459 intergenic CG9717 - chr3R 30587578 intergenic CG9717 - chr3R 30587696 intergenic CG9717 - chr3R_24_30585001 chr3R_30585001 RAL-900_125b 3658 chr3R 30592479 30592533 chr3R 30592619 30592684 22 158 4.0 11.0 7.5 2.6 205 chr3R 30592479 intergenic CG2246 - chr3R 30592582 intergenic CG2246 - chr3R 30592684 intergenic CG2246 - chr3R_22_30590001 chr3R_30590001 RAL-900_125b 3659 chr3R 30627563 30627628 chr3R 30627693 30627758 32 129 6.5 7.0 6.8 4.1 195 chr3R 30627563 3` UTR CG2267 - chr3R 30627660 exon CG2267 - chr3R 30627758 exon CG2267 - chr3R_32_30625001 chr3R_30625001 RAL-900_125b 3660 chr3R 30679474 30679549 chr3R 30686993 30687055 blood 17 7516 5.5 7.5 6.5 2.3 7581 chr3R 30679474 intergenic not near genes chr3R 30683264 intergenic not near genes chr3R 30687055 intergenic not near genes chr3R_17_30680001 chr3R_30680001 RAL-900_125b 3661 chr3R 30747506 30747545 chr3R 30747632 30747639 11 122 18.5 7.5 13.0 0.8 133 chr3R 30747506 intergenic CR43238 - chr3R 30747572 intergenic CR43238 - chr3R 30747639 intergenic CR43238 - chr3R_11_30745001 chr3R_30745001 RAL-900_125b 3662 chr3R 30761299 30761334 chr3R 30761431 30761466 10 132 14.5 8.0 11.2 0.8 167 chr3R 30761299 intergenic not near genes chr3R 30761382 intergenic not near genes chr3R 30761466 intergenic not near genes chr3R_10_30760001 chr3R_30760001 RAL-900_125b 3663 chr3R 30818770 30818829 chr3R 30820385 30820444 1360 25 1615 9.0 9.5 9.2 2.5 1674 chr3R 30818770 intron cindr + chr3R 30819607 intron cindr + chr3R 30820444 intron cindr + chr3R_25_30815001 chr3R_30815001 RAL-900_125b 3664 chr3R 30845035 30845038 chr3R 30845163 30845166 4 128 21.0 0.0 10.5 0.3 131 chr3R 30845035 intergenic not near genes chr3R 30845100 intergenic not near genes chr3R 30845166 intergenic not near genes chr3R_4_30845001 chr3R_30845001 RAL-900_125b 3665 chr3R 30859357 30859426 chr3R 30859485 30859554 26 128 9.0 10.0 9.5 2.5 197 chr3R 30859357 intergenic not near genes chr3R 30859456 intergenic not near genes chr3R 30859554 intergenic not near genes chr3R_26_30855001 chr3R_30855001 RAL-900_125b 3666 chr3R 30927777 30927787 chr3R 30927910 30927920 7 133 14.5 16.5 15.5 0.4 143 chr3R 30927777 intron Ptx1 + chr3R 30927848 intron Ptx1 + chr3R 30927920 intron Ptx1 + chr3R_7_30925001 chr3R_30925001 RAL-900_125b 3667 chr3R 30946403 30946415 chr3R 30946537 30946549 4 134 0.0 0.0 0.0 4.0 146 chr3R 30946403 intergenic not near genes chr3R 30946476 intergenic not near genes chr3R 30946549 intergenic not near genes chr3R_4_30945001 chr3R_30945001 RAL-900_125b 3668 chr3R 30956812 30956885 chr3R 30956969 30957042 30 157 9.0 8.5 8.8 3.1 230 chr3R 30956812 intergenic not near genes chr3R 30956927 intergenic not near genes chr3R 30957042 intergenic not near genes chr3R_30_30955001 chr3R_30955001 RAL-900_125b 3669 chr3R 30980797 30980820 chr3R 30980923 30980946 11 126 7.0 7.5 7.2 1.3 149 chr3R 30980797 intron 5-HT7 - chr3R 30980872 intron 5-HT7 - chr3R 30980946 intron 5-HT7 - chr3R_11_30980001 chr3R_30980001 RAL-900_125b 3670 chr3R 30982559 30982601 chr3R 30982693 30982742 19 132 14.0 9.5 11.8 1.5 183 chr3R 30982559 intron 5-HT7 - chr3R 30982650 intron 5-HT7 - chr3R 30982742 intron 5-HT7 - chr3R_19_30980001 chr3R_30980001 RAL-900_125b 3671 chr3R 30982605 30982621 chr3R 30982687 30982743 7 119 10.0 7.5 8.8 0.7 138 chr3R 30982605 intron 5-HT7 - chr3R 30982674 intron 5-HT7 - chr3R 30982743 intron 5-HT7 - chr3R_7_30980001 chr3R_30980001 RAL-900_125b 3672 chr3R 31042068 31042144 chr3R 31042205 31042263 35 135 7.0 7.0 7.0 4.4 195 chr3R 31042068 exon CanA1 + chr3R 31042166 intron CanA1 + chr3R 31042263 intron CanA1 + chr3R_35_31040001 chr3R_31040001 RAL-900_125b 3673 chr3R 31070802 31070878 chr3R 31070929 31071003 27 125 6.5 8.0 7.2 3.3 201 chr3R 31070802 intron Sox100B + chr3R 31070902 intron Sox100B + chr3R 31071003 intron Sox100B + chr3R_27_31070001 chr3R_31070001 RAL-900_125b 3674 chr3R 31072925 31072984 chr3R 31073197 31073241 30 269 7.5 7.5 7.5 3.5 316 chr3R 31072925 intron Sox100B + chr3R 31073083 intron Sox100B + chr3R 31073241 exon Sox100B + chr3R_30_31070001 chr3R_31070001 RAL-900_125b 3675 chr3R 31074188 31074251 chr3R 31081836 31081899 springer 24 7648 15.0 13.0 14.0 1.6 7711 chr3R 31074188 intron Sox100B + chr3R 31078044 intron Sox100B + chr3R 31081899 exon Sox100B + chr3R_24_31075001 chr3R_31075001 RAL-900_125b 3676 chr3R 31137107 31137181 chr3R 31137237 31137299 43 128 7.5 5.5 6.5 5.7 192 chr3R 31137107 intron Gycbeta100B + chr3R 31137203 intron Gycbeta100B + chr3R 31137299 intron Gycbeta100B + chr3R_43_31135001 chr3R_31135001 RAL-900_125b 3677 chr3R 31187977 31187992 chr3R 31188129 31188144 6 152 25.5 8.5 17.0 0.3 167 chr3R 31187977 intron mesh - chr3R 31188060 intron mesh - chr3R 31188144 intron mesh - chr3R_6_31185001 chr3R_31185001 RAL-900_125b 3678 chr3R 31187999 31188048 chr3R 31188125 31188190 24 145 13.5 7.5 10.5 2.1 191 chr3R 31187999 intron mesh - chr3R 31188094 intron mesh - chr3R 31188190 intron mesh - chr3R_24_31185001 chr3R_31185001 RAL-900_125b 3679 chr3R 31265255 31265307 chr3R 31265425 31265502 8 175 7.5 7.0 7.2 1.0 247 chr3R 31265255 intergenic ppk24 + chr3R 31265378 intergenic ppk24 + chr3R 31265502 intergenic ppk24 + chr3R_8_31265001 chr3R_31265001 RAL-900_125b 3680 chr3R 31279338 31279400 chr3R 31285579 31285621 diver 29 6237 7.5 10.0 8.8 3.0 6283 chr3R 31279338 intergenic not near genes chr3R 31282480 intergenic not near genes chr3R 31285621 intergenic not near genes chr3R_29_31280001 chr3R_31280001 RAL-900_125b 3681 chr3R 31330405 31330408 chr3R 31335645 31335660 copia 5 5250 18.0 12.0 15.0 0.3 5255 chr3R 31330405 intron CG34347 + chr3R 31333032 intron CG34347 + chr3R 31335660 intron CG34347 + chr3R_5_31330001 chr3R_31330001 RAL-900_125b 3682 chr3R 31412661 31412733 chr3R 31412804 31412876 24 142 4.5 4.0 4.2 4.6 215 chr3R 31412661 intron Gprk2 + chr3R 31412768 intron Gprk2 + chr3R 31412876 intron Gprk2 + chr3R_24_31410001 chr3R_31410001 RAL-900_125b 3683 chr3R 31413050 31413072 chr3R 31418300 31418322 copia 5 5246 12.0 1.0 6.5 0.7 5272 chr3R 31413050 intron Gprk2 + chr3R 31415686 intron Gprk2 + chr3R 31418322 intron Gprk2 + chr3R_5_31415001 chr3R_31415001 RAL-900_125b 3684 chr3R 27499991 27499996 chr3R 31428223 31428240 4 3928238 30.0 19.5 24.8 0.2 3928249 chr3R 27499991 intergenic not near genes chr3R 29464116 intron Ptp99A + chr3R 31428240 intron Gprk2 + chr3R_4_29460001 chr3R_29460001 RAL-900_125b 3685 chr3R 31435322 31435391 chr3R 31435524 31435593 35 202 6.0 9.5 7.8 4.0 271 chr3R 31435322 intron Gprk2 + chr3R 31435458 intron Gprk2 + chr3R 31435593 intron Gprk2 + chr3R_35_31435001 chr3R_31435001 RAL-900_125b 3686 chr3R 31477325 31477388 chr3R 31477536 31477606 32 216 6.0 6.5 6.2 4.4 281 chr3R 31477325 intergenic not near genes chr3R 31477466 intergenic not near genes chr3R 31477606 intergenic not near genes chr3R_32_31475001 chr3R_31475001 RAL-900_125b 3687 chr3R 31487823 31487833 chr3R 31487954 31487959 7 130 19.0 13.0 16.0 0.4 136 chr3R 31487823 intergenic not near genes chr3R 31487891 intergenic not near genes chr3R 31487959 intergenic not near genes chr3R_7_31485001 chr3R_31485001 RAL-900_125b 3688 chr3R 31537235 31537248 chr3R 31537397 31537410 10 162 27.0 10.0 18.5 0.5 175 chr3R 31537235 intergenic not near genes chr3R 31537322 intergenic not near genes chr3R 31537410 intergenic not near genes chr3R_10_31535001 chr3R_31535001 RAL-900_125b 3689 chr3R 31537250 31537301 chr3R 31537394 31537463 38 161 12.5 10.0 11.2 3.1 213 chr3R 31537250 intergenic not near genes chr3R 31537356 intergenic not near genes chr3R 31537463 intergenic not near genes chr3R_38_31535001 chr3R_31535001 RAL-900_125b 3690 chr3R 31691492 31691512 chr3R 31696308 31696328 Doc 9 4816 17.5 13.0 15.2 0.6 4836 chr3R 31691492 intergenic not near genes chr3R 31693910 intergenic not near genes chr3R 31696328 intergenic not near genes chr3R_9_31690001 chr3R_31690001 RAL-900_125b 3691 chr3R 31691513 31691555 chr3R 31696302 31696371 Doc 22 4807 9.0 10.5 9.8 2.0 4858 chr3R 31691513 intergenic not near genes chr3R 31693942 intergenic not near genes chr3R 31696371 intergenic not near genes chr3R_22_31690001 chr3R_31690001 RAL-900_125b 3692 chr3R 31858125 31858206 chr3R 31858275 31858359 20 148 0.0 4.0 2.0 6.7 234 chr3R 31858125 intron heph - chr3R 31858242 intron heph - chr3R 31858359 intron heph - chr3R_20_31855001 chr3R_31855001 RAL-900_125b 3693 chr3R 31911635 31911704 chr3R 31911771 31911840 33 134 10.0 8.0 9.0 3.3 205 chr3R 31911635 intron heph - chr3R 31911738 intron heph - chr3R 31911840 intron heph - chr3R_33_31910001 chr3R_31910001 RAL-900_125b 3694 chr3R 31931144 31931210 chr3R 31931277 31931343 27 133 8.5 9.0 8.8 2.8 199 chr3R 31931144 intron heph - chr3R 31931244 intron heph - chr3R 31931343 intron heph - chr3R_27_31930001 chr3R_31930001 RAL-900_125b 3695 chr3R 31945975 31946044 chr3R 31946114 31946178 23 136 10.5 6.5 8.5 2.4 203 chr3R 31945975 intron heph - chr3R 31946076 intron heph - chr3R 31946178 intron heph - chr3R_23_31945001 chr3R_31945001 RAL-900_125b 3696 chr3R 31953985 31954032 chr3R 31954111 31954158 28 124 4.5 4.5 4.5 5.1 173 chr3R 31953985 intron heph - chr3R 31954072 intron heph - chr3R 31954158 intron heph - chr3R_28_31950001 chr3R_31950001 RAL-900_125b 3697 chr3R 31954392 31954444 chr3R 31954510 31954581 16 131 3.5 10.5 7.0 2.0 189 chr3R 31954392 intron heph - chr3R 31954486 intron heph - chr3R 31954581 intron heph - chr3R_16_31950001 chr3R_31950001 RAL-900_125b 3698 chr3R 31957637 31957930 chr3R 31957794 31958061 6 148 0.0 0.5 0.2 5.0 424 chr3R 31957637 intron heph - chr3R 31957849 intron heph - chr3R 31958061 intron heph - chr3R_6_31955001 chr3R_31955001 RAL-900_125b 3699 chr3R 31957958 31957982 chr3R 31958065 31958114 9 128 0.0 9.5 4.8 1.6 156 chr3R 31957958 intron heph - chr3R 31958036 intron heph - chr3R 31958114 intron heph - chr3R_9_31955001 chr3R_31955001 RAL-900_125b 3700 chr3R 31978508 31978581 chr3R 31978748 31978805 23 232 9.0 4.5 6.8 2.9 297 chr3R 31978508 intron,intron heph -,CG2003 + chr3R 31978656 intron,intron heph -,CG2003 + chr3R 31978805 intron,intron heph -,CG2003 + chr3R_23_31975001 chr3R_31975001 RAL-900_125b 3701 chr3R 31997949 31998016 chr3R 32005467 32005536 blood 36 7520 6.0 5.0 5.5 5.5 7587 chr3R 31997949 intron heph - chr3R 32001742 intron heph - chr3R 32005536 intron heph - chr3R_36_32000001 chr3R_32000001 RAL-900_125b 3702 chr4 76452 76506 chr4 81945 81999 I-element 19 5492 8.5 8.5 8.5 2.0 5547 chr4 76452 intron pan + chr4 79226 intron pan + chr4 81999 intron pan + chr4_19_75001 chr4_75001 RAL-900_125b 3703 chr4 264932 265001 chr4 265185 265253 28 253 10.5 8.5 9.5 2.7 321 chr4 264932 exon RhoGAP102A + chr4 265092 3` UTR RhoGAP102A + chr4 265253 3` UTR RhoGAP102A + chr4_28_265001 chr4_265001 RAL-900_125b 3704 chr4 319948 320013 chr4 328174 328239 Stalker2 30 8225 11.0 9.5 10.2 2.7 8291 chr4 319948 3` UTR CG32850 + chr4 324094 intron CG32850 + chr4 328239 3` UTR,3` UTR CG32850 +,PMCA - chr4_30_320001 chr4_320001 RAL-900_125b 3705 chr4 336209 336279 chr4 336426 336496 31 216 6.0 9.0 7.5 3.6 287 chr4 336209 intron PMCA - chr4 336352 intron PMCA - chr4 336496 intron PMCA - chr4_31_335001 chr4_335001 RAL-900_125b 3706 chr4 409181 409224 chr4 409314 409357 19 133 7.0 0.0 3.5 4.2 176 chr4 409181 intergenic not near genes chr4 409269 intergenic not near genes chr4 409357 intergenic not near genes chr4_19_405001 chr4_405001 RAL-900_125b 3707 chr4 498156 498172 chr4 498302 498318 INE-1 13 146 18.5 13.0 15.8 0.8 162 chr4 498156 intergenic not near genes chr4 498237 intergenic not near genes chr4 498318 intergenic not near genes chr4_13_495001 chr4_495001 RAL-900_125b 3708 chr4 662136 662205 chr4 662831 662900 INE-1 23 695 9.0 5.5 7.2 2.8 764 chr4 662136 intron gw - chr4 662518 intron gw - chr4 662900 5` UTR gw - chr4_23_660001 chr4_660001 RAL-900_125b 3709 chr4 671564 671627 chr4 680197 680260 Tirant 32 8632 10.0 8.5 9.2 3.1 8696 chr4 671564 intron CG11360 + chr4 675912 intron CG11360 + chr4 680260 intron CG11360 + chr4_32_675001 chr4_675001 RAL-900_125b 3710 chr4 852858 852924 chr4 853272 853338 28 413 7.0 9.5 8.2 3.0 480 chr4 852858 intergenic not near genes chr4 853098 intergenic not near genes chr4 853338 intergenic CG11148 - chr4_28_850001 chr4_850001 RAL-900_125b 3711 chrX 288606 288668 chrX 288754 288816 21 148 8.5 6.5 7.5 2.5 210 chrX 288606 intron,intron CG3777 +,CG13375 - chrX 288711 intron,intron CG3777 +,CG13375 - chrX 288816 intron,intron CG3777 +,CG13375 - chrX_21_285001 chrX_285001 RAL-900_125b 3712 chrX 295810 295877 chrX 303480 303547 412 21 7670 7.5 5.0 6.2 2.9 7737 chrX 295810 intron CG3777 + chrX 299678 intron CG3777 + chrX 303547 intron CG3777 + chrX_21_295001 chrX_295001 RAL-900_125b 3713 chrX 318434 318495 chrX 323570 323604 flea 13 5134 6.5 7.0 6.8 1.7 5170 chrX 318434 intron,intron CG3777 +,CG32816 - chrX 321019 intron,intron CG3777 +,CG32816 - chrX 323604 intron,intron CG3777 +,CG32816 - chrX_13_320001 chrX_320001 RAL-900_125b 3714 chrX 388753 388794 chrX 390335 390386 16 1588 38.0 34.0 36.0 0.4 1633 chrX 388753 intron CG32816 - chrX 389570 intron CG32816 - chrX 390386 intron CG32816 - chrX_16_385001 chrX_385001 RAL-900_125b 3715 chrX 388251 388321 chrX 390548 390618 22 2297 45.0 42.0 43.5 0.5 2367 chrX 388251 intron CG32816 - chrX 389434 intron CG32816 - chrX 390618 intron CG32816 - chrX_22_385001 chrX_385001 RAL-900_125b 3716 chrX 428381 428447 chrX 434616 434641 3S18 19 6233 5.5 10.5 8.0 2.1 6260 chrX 428381 intron CG32816 - chrX 431511 intron CG32816 - chrX 434641 intron CG32816 - chrX_19_430001 chrX_430001 RAL-900_125b 3717 chrX 494571 494622 chrX 494702 494764 18 141 9.5 8.5 9.0 1.8 193 chrX 494571 intergenic CG17778 + chrX 494668 5` UTR CG17778 + chrX 494764 intron CG17778 + chrX_18_490001 chrX_490001 RAL-900_125b 3718 chrX 551381 551454 chrX 558993 559018 412 18 7607 5.0 5.5 5.2 2.9 7637 chrX 551381 intron Appl + chrX 555200 intron Appl + chrX 559018 intron Appl + chrX_18_555001 chrX_555001 RAL-900_125b 3719 chrX 714218 714285 chrX 714401 714458 23 180 5.0 11.0 8.0 2.6 240 chrX 714218 intron sdk + chrX 714338 intron sdk + chrX 714458 intron sdk + chrX_23_710001 chrX_710001 RAL-900_125b 3720 chrX 802244 802267 chrX 802371 802394 10 124 14.0 12.5 13.2 0.7 150 chrX 802244 exon CG13359 - chrX 802319 exon CG13359 - chrX 802394 exon CG13359 - chrX_10_800001 chrX_800001 RAL-900_125b 3721 chrX 802275 802314 chrX 802362 802390 8 103 8.0 12.0 10.0 0.7 115 chrX 802275 exon CG13359 - chrX 802332 exon CG13359 - chrX 802390 exon CG13359 - chrX_8_800001 chrX_800001 RAL-900_125b 3722 chrX 812224 812289 chrX 817905 817970 297 22 5681 13.0 10.0 11.5 1.8 5746 chrX 812224 intron CG43867 - chrX 815097 intron CG43867 - chrX 817970 intron CG43867 - chrX_22_815001 chrX_815001 RAL-900_125b 3723 chrX 827558 827594 chrX 835400 835436 roo 17 7840 17.5 11.0 14.2 1.1 7878 chrX 827558 intron CG43867 - chrX 831497 intron CG43867 - chrX 835436 intron CG43867 - chrX_17_830001 chrX_830001 RAL-900_125b 3724 chrX 827596 827621 chrX 835398 835463 roo 14 7839 11.5 10.0 10.8 1.2 7867 chrX 827596 intron CG43867 - chrX 831530 intron CG43867 - chrX 835463 intron CG43867 - chrX_14_830001 chrX_830001 RAL-900_125b 3725 chrX 906659 906734 chrX 908498 908527 S-element 28 1835 8.0 12.0 10.0 2.5 1868 chrX 906659 intron CG43867 - chrX 907593 intron CG43867 - chrX 908527 intron CG43867 - chrX_28_905001 chrX_905001 RAL-900_125b 3726 chrX 949092 949126 chrX 949238 949272 8 146 10.0 17.0 13.5 0.6 180 chrX 949092 3` UTR CG3690 - chrX 949182 3` UTR CG3690 - chrX 949272 3` UTR CG3690 - chrX_8_945001 chrX_945001 RAL-900_125b 3727 chrX 1033307 1033323 chrX 1040990 1041006 412 5 7683 17.5 6.5 12.0 0.4 7699 chrX 1033307 intron su(w[a]) + chrX 1037156 intron su(w[a]) + chrX 1041006 intron su(w[a]) + chrX_5_1035001 chrX_1035001 RAL-900_125b 3728 chrX 1051030 1051077 chrX 1051158 1051205 20 127 10.0 10.0 10.0 1.8 175 chrX 1051030 intron CR44779 + chrX 1051118 intron CR44779 + chrX 1051205 intron CR44779 + chrX_20_1050001 chrX_1050001 RAL-900_125b 3729 chrX 1063715 1063747 chrX 1072558 1072590 roo 10 8842 13.5 10.5 12.0 0.8 8875 chrX 1063715 intron CR44779 + chrX 1068152 intron CR44779 + chrX 1072590 intron CR44779 + chrX_10_1065001 chrX_1065001 RAL-900_125b 3730 chrX 1151751 1151805 chrX 1152050 1152120 21 314 10.0 6.5 8.2 2.3 369 chrX 1151751 intergenic not near genes chrX 1151936 intergenic not near genes chrX 1152120 intergenic not near genes chrX_21_1150001 chrX_1150001 RAL-900_125b 3731 chrX 1229621 1229640 chrX 1229757 1229768 6 135 13.0 10.0 11.5 0.5 147 chrX 1229621 intron CG3638 - chrX 1229694 intron CG3638 - chrX 1229768 intron CG3638 - chrX_6_1225001 chrX_1225001 RAL-900_125b 3732 chrX 1229641 1229673 chrX 1229747 1229794 9 120 9.5 8.0 8.8 0.9 153 chrX 1229641 intron CG3638 - chrX 1229718 intron CG3638 - chrX 1229794 intron CG3638 - chrX_9_1225001 chrX_1225001 RAL-900_125b 3733 chrX 1253688 1253755 chrX 1253820 1253885 30 130 7.5 9.5 8.5 3.2 197 chrX 1253688 intron Atf3 - chrX 1253786 intron Atf3 - chrX 1253885 intron Atf3 - chrX_30_1250001 chrX_1250001 RAL-900_125b 3734 chrX 1357734 1357796 chrX 1367954 1368016 Doc 19 10220 9.5 12.0 10.8 1.6 10282 chrX 1357734 intergenic png - chrX 1362875 intergenic not near genes chrX 1368016 intergenic not near genes chrX_19_1360001 chrX_1360001 RAL-900_125b 3735 chrX 1518004 1518070 chrX 1523448 1523497 jockey 19 5449 7.5 7.5 7.5 2.2 5493 chrX 1518004 intergenic inc + chrX 1520750 intergenic not near genes chrX 1523497 intergenic not near genes chrX_19_1520001 chrX_1520001 RAL-900_125b 3736 chrX 1559867 1559943 chrX 1560001 1560077 20 130 10.5 10.0 10.2 1.8 210 chrX 1559867 intron Mur2B - chrX 1559972 intron Mur2B - chrX 1560077 intron Mur2B - chrX_20_1555001 chrX_1555001 RAL-900_125b 3737 chrX 1706806 1706826 chrX 1706932 1706947 4 125 13.5 10.5 12.0 0.3 141 chrX 1706806 intergenic not near genes chrX 1706876 intergenic not near genes chrX 1706947 intergenic not near genes chrX_4_1705001 chrX_1705001 RAL-900_125b 3738 chrX 1845687 1845754 chrX 1845837 1845904 24 147 8.5 9.0 8.8 2.4 217 chrX 1845687 intron CG42666 + chrX 1845796 intron CG42666 + chrX 1845904 intron CG42666 + chrX_24_1845001 chrX_1845001 RAL-900_125b 3739 chrX 1930492 1930561 chrX 1938113 1938182 opus 38 7621 3.5 7.0 5.2 6.1 7690 chrX 1930492 3` UTR CG11596 + chrX 1934337 intergenic not near genes chrX 1938182 3` UTR CG3857 - chrX_38_1930001 chrX_1930001 RAL-900_125b 3740 chrX 1954861 1954910 chrX 1962830 1962855 Stalker2 16 7971 6.5 5.0 5.8 2.4 7994 chrX 1954861 intron Hr4 + chrX 1958858 intron Hr4 + chrX 1962855 intron Hr4 + chrX_16_1955001 chrX_1955001 RAL-900_125b 3741 chrX 2023916 2023986 chrX 2024089 2024139 33 171 36.5 43.0 39.8 0.8 223 chrX 2023916 3` UTR,3` UTR east +,Actn - chrX 2024028 3` UTR,3` UTR east +,Actn - chrX 2024139 3` UTR,3` UTR east +,Actn - chrX_33_2020001 chrX_2020001 RAL-900_125b 3742 chrX 2020865 2020922 chrX 2025589 2025610 12 4688 34.0 34.5 34.2 0.3 4745 chrX 2020865 exon east + chrX 2023238 3` UTR east + chrX 2025610 exon Actn - chrX_12_2020001 chrX_2020001 RAL-900_125b 3743 chrX 2308794 2308824 chrX 2317427 2317431 Tirant 10 8630 4.5 11.0 7.8 1.1 8637 chrX 2308794 intron phl + chrX 2313112 intron phl + chrX 2317431 intron phl + chrX_10_2310001 chrX_2310001 RAL-900_125b 3744 chrX 2394273 2394308 chrX 2394383 2394440 12 122 7.5 10.0 8.8 1.2 167 chrX 2394273 intergenic not near genes chrX 2394356 intergenic not near genes chrX 2394440 intergenic not near genes chrX_12_2390001 chrX_2390001 RAL-900_125b 3745 chrX 2399798 2399848 chrX 2408201 2408235 roo 12 8397 9.0 15.0 12.0 0.9 8437 chrX 2399798 intergenic not near genes chrX 2404016 intergenic not near genes chrX 2408235 intergenic not near genes chrX_12_2400001 chrX_2400001 RAL-900_125b 3746 chrX 2429615 2429667 chrX 2429746 2429798 14 131 0.0 7.5 3.8 2.9 183 chrX 2429615 intergenic not near genes chrX 2429706 intergenic not near genes chrX 2429798 intergenic not near genes chrX_14_2425001 chrX_2425001 RAL-900_125b 3747 chrX 2482719 2482736 chrX 2482847 2482857 5 127 13.0 7.5 10.2 0.4 138 chrX 2482719 intron trol - chrX 2482788 intron trol - chrX 2482857 intron trol - chrX_5_2480001 chrX_2480001 RAL-900_125b 3748 chrX 2517804 2517874 chrX 2517931 2518001 18 127 7.5 7.0 7.2 2.2 197 chrX 2517804 intron trol - chrX 2517902 intron trol - chrX 2518001 intron trol - chrX_18_2515001 chrX_2515001 RAL-900_125b 3749 chrX 2525432 2525439 chrX 2525563 2525570 4 131 13.5 10.5 12.0 0.3 138 chrX 2525432 intron trol - chrX 2525501 intron trol - chrX 2525570 intron trol - chrX_4_2525001 chrX_2525001 RAL-900_125b 3750 chrX 2525444 2525503 chrX 2525562 2525609 20 125 6.0 10.5 8.2 2.2 165 chrX 2525444 intron trol - chrX 2525526 intron trol - chrX 2525609 intron trol - chrX_20_2525001 chrX_2525001 RAL-900_125b 3751 chrX 2559324 2559379 chrX 2559462 2559517 27 137 5.5 6.5 6.0 3.9 193 chrX 2559324 intron Pdfr + chrX 2559420 intron Pdfr + chrX 2559517 intron Pdfr + chrX_27_2555001 chrX_2555001 RAL-900_125b 3752 chrX 2568157 2568177 chrX 2568455 2568455 9 296 18.0 7.0 12.5 0.7 298 chrX 2568157 intron Pdfr + chrX 2568306 intron Pdfr + chrX 2568455 intron Pdfr + chrX_9_2565001 chrX_2565001 RAL-900_125b 3753 chrX 2568179 2568217 chrX 2568453 2568515 15 294 9.0 6.5 7.8 1.7 336 chrX 2568179 intron Pdfr + chrX 2568347 intron Pdfr + chrX 2568515 intron Pdfr + chrX_15_2565001 chrX_2565001 RAL-900_125b 3754 chrX 2578768 2578835 chrX 2578909 2578977 28 141 3.5 8.5 6.0 4.0 209 chrX 2578768 intergenic Pdfr +,Vha36-3 - chrX 2578872 intergenic Vha36-3 -,Pdfr + chrX 2578977 intergenic Vha36-3 -,Pdfr + chrX_28_2575001 chrX_2575001 RAL-900_125b 3755 chrX 2610345 2610407 chrX 2617512 2617574 HMS-Beagle 7 7166 5.0 8.0 6.5 0.9 7229 chrX 2610345 intergenic CG8636 - chrX 2613960 intergenic not near genes chrX 2617574 intergenic Tsp3A - chrX_7_2610001 chrX_2610001 RAL-900_125b 3756 chrX 2758004 2758072 chrX 2758134 2758180 12 125 8.0 9.0 8.5 1.3 176 chrX 2758004 intron kirre + chrX 2758092 intron kirre + chrX 2758180 intron kirre + chrX_12_2755001 chrX_2755001 RAL-900_125b 3757 chrX 2807321 2807381 chrX 2807466 2807526 23 144 6.5 7.0 6.8 2.9 205 chrX 2807321 intron kirre + chrX 2807424 intron kirre + chrX 2807526 intron kirre + chrX_23_2805001 chrX_2805001 RAL-900_125b 3758 chrX 2808885 2808924 chrX 2809015 2809038 15 127 11.5 12.0 11.8 1.2 153 chrX 2808885 intron kirre + chrX 2808962 intron kirre + chrX 2809038 intron kirre + chrX_15_2805001 chrX_2805001 RAL-900_125b 3759 chrX 2844865 2844925 chrX 2852325 2852385 mdg1 26 7460 7.5 8.5 8.0 2.9 7520 chrX 2844865 intron kirre + chrX 2848625 intron kirre + chrX 2852385 intron kirre + chrX_26_2845001 chrX_2845001 RAL-900_125b 3760 chrX 2859519 2859585 chrX 2859647 2859653 11 114 4.5 4.0 4.2 2.1 134 chrX 2859519 intron kirre + chrX 2859586 intron kirre + chrX 2859653 intron kirre + chrX_11_2855001 chrX_2855001 RAL-900_125b 3761 chrX 2888070 2888103 chrX 2888198 2888231 11 128 10.0 6.5 8.2 1.2 161 chrX 2888070 intron kirre + chrX 2888150 intron kirre + chrX 2888231 intron kirre + chrX_11_2885001 chrX_2885001 RAL-900_125b 3762 chrX 2888104 2888140 chrX 2888194 2888268 8 122 7.5 7.0 7.2 1.0 164 chrX 2888104 intron kirre + chrX 2888186 intron kirre + chrX 2888268 intron kirre + chrX_8_2885001 chrX_2885001 RAL-900_125b 3763 chrX 2893739 2893802 chrX 2894781 2894845 26 1045 37.0 39.0 38.0 0.7 1106 chrX 2893739 intron,exon kirre +,CG3526 + chrX 2894292 intron kirre + chrX 2894845 intron kirre + chrX_26_2890001 chrX_2890001 RAL-900_125b 3764 chrX 3052696 3052743 chrX 3052843 3052895 9 156 4.0 5.5 4.8 1.6 199 chrX 3052696 intron kirre + chrX 3052796 intron kirre + chrX 3052895 intron kirre + chrX_9_3050001 chrX_3050001 RAL-900_125b 3765 chrX 3057981 3058027 chrX 3058272 3058318 pogo 17 291 10.5 9.0 9.8 1.6 337 chrX 3057981 intron kirre + chrX 3058150 intron kirre + chrX 3058318 intron kirre + chrX_17_3055001 chrX_3055001 RAL-900_125b 3766 chrX 3075583 3075617 chrX 3080943 3080977 Transpac 8 5360 11.5 0.0 5.8 1.2 5394 chrX 3075583 intron kirre + chrX 3078280 intron kirre + chrX 3080977 intron kirre + chrX_8_3075001 chrX_3075001 RAL-900_125b 3767 chrX 3082550 3082604 chrX 3082677 3082721 10 118 8.5 8.0 8.2 1.1 171 chrX 3082550 intron kirre + chrX 3082636 intron kirre + chrX 3082721 intron kirre + chrX_10_3080001 chrX_3080001 RAL-900_125b 3768 chrX 3100682 3100738 chrX 3100963 3101020 23 281 5.0 1.5 3.2 5.5 338 chrX 3100682 intron kirre + chrX 3100851 intron kirre + chrX 3101020 intron kirre + chrX_23_3100001 chrX_3100001 RAL-900_125b 3769 chrX 3109395 3109469 chrX 3109522 3109596 22 127 6.0 7.5 6.8 2.8 201 chrX 3109395 intron kirre + chrX 3109496 intron kirre + chrX 3109596 intron kirre + chrX_22_3105001 chrX_3105001 RAL-900_125b 3770 chrX 3155677 3155754 chrX 3155816 3155892 24 136 4.0 2.0 3.0 6.0 215 chrX 3155677 intron N + chrX 3155784 intron N + chrX 3155892 intron N + chrX_24_3155001 chrX_3155001 RAL-900_125b 3771 chrX 3178463 3178483 chrX 3186176 3186194 opus 6 7711 7.0 5.5 6.2 0.8 7731 chrX 3178463 intron dnc + chrX 3182328 intron dnc + chrX 3186194 intron dnc + chrX_6_3180001 chrX_3180001 RAL-900_125b 3772 chrX 3203421 3203482 chrX 3203668 3203731 20 246 6.5 6.0 6.2 2.8 310 chrX 3203421 intron dnc + chrX 3203576 intron dnc + chrX 3203731 intron dnc + chrX_20_3200001 chrX_3200001 RAL-900_125b 3773 chrX 3206434 3206496 chrX 3206563 3206619 7 128 2.0 9.0 5.5 1.1 185 chrX 3206434 intron dnc + chrX 3206526 intron dnc + chrX 3206619 intron dnc + chrX_7_3205001 chrX_3205001 RAL-900_125b 3774 chrX 3306302 3306375 chrX 3306434 3306507 17 132 8.5 0.0 4.2 3.3 205 chrX 3306302 intron dnc + chrX 3306404 intron dnc + chrX 3306507 intron dnc + chrX_17_3305001 chrX_3305001 RAL-900_125b 3775 chrX 3351757 3351811 chrX 3351893 3351942 17 130 6.0 10.0 8.0 1.9 185 chrX 3351757 intergenic not near genes chrX 3351850 intergenic not near genes chrX 3351942 intergenic not near genes chrX_17_3350001 chrX_3350001 RAL-900_125b 3776 chrX 3352720 3352747 chrX 3352859 3352886 11 139 9.5 10.5 10.0 1.0 166 chrX 3352720 intergenic not near genes chrX 3352803 intergenic not near genes chrX 3352886 intergenic not near genes chrX_11_3350001 chrX_3350001 RAL-900_125b 3777 chrX 3374162 3374166 chrX 3374293 3374297 4 131 5.0 10.5 7.8 0.5 135 chrX 3374162 intron,intron CR44999 +,dm + chrX 3374230 intron,intron CR44999 +,dm + chrX 3374297 intron,intron CR44999 +,dm + chrX_4_3370001 chrX_3370001 RAL-900_125b 3778 chrX 3398095 3398292 chrX 3398226 3398418 13 131 12.5 6.5 9.5 1.2 323 chrX 3398095 intron,intron CR44999 +,CG12535 - chrX 3398256 intron,intron CR44999 +,CG12535 - chrX 3398418 intron,intron CR44999 +,CG12535 - chrX_13_3395001 chrX_3395001 RAL-900_125b 3779 chrX 3408934 3409013 chrX 3409060 3409140 17 124 5.0 4.0 4.5 3.1 206 chrX 3408934 intron,intron CR44999 +,CG12535 - chrX 3409037 intron,intron CR44999 +,CG12535 - chrX 3409140 intron,intron CR44999 +,CG12535 - chrX_17_3405001 chrX_3405001 RAL-900_125b 3780 chrX 3414971 3415044 chrX 3421207 3421207 3S18 27 6231 4.0 6.0 5.0 4.5 6236 chrX 3414971 intron,intron CR44999 +,CG12535 - chrX 3418089 intron,intron CR44999 +,CG12535 - chrX 3421207 intron,intron CR44999 +,CG12535 - chrX_27_3415001 chrX_3415001 RAL-900_125b 3781 chrX 3493049 3493122 chrX 3502258 3502323 roo 11 9208 3.5 0.5 2.0 3.7 9274 chrX 3493049 intron,intron CR44999 +,Gas8 - chrX 3497686 intron,intron CR44999 +,Gas8 - chrX 3502323 intron,intron CR44999 +,Gas8 - chrX_11_3495001 chrX_3495001 RAL-900_125b 3782 chrX 3567237 3567289 chrX 3567372 3567424 9 135 9.5 5.5 7.5 1.1 187 chrX 3567237 intron,intron CG32791 -,ppk8 + chrX 3567330 intron,intron CG32791 -,ppk8 + chrX 3567424 intron,intron CG32791 -,ppk8 + chrX_9_3565001 chrX_3565001 RAL-900_125b 3783 chrX 3597511 3597522 chrX 3619729 3619740 roo 4 22218 13.5 3.5 8.5 0.4 22229 chrX 3597511 intron AstA-R1 + chrX 3608626 intron AstA-R1 + chrX 3619740 intron AstA-R1 + chrX_4_3605001 chrX_3605001 RAL-900_125b 3784 chrX 3597524 3597569 chrX 3619727 3619787 roo 9 22216 9.5 3.5 6.5 1.2 22263 chrX 3597524 intron AstA-R1 + chrX 3608656 intron AstA-R1 + chrX 3619787 intron AstA-R1 + chrX_9_3605001 chrX_3605001 RAL-900_125b 3785 chrX 3626089 3626123 chrX 3626230 3626258 5 134 6.0 0.0 3.0 1.2 169 chrX 3626089 intron AstA-R1 + chrX 3626174 intron AstA-R1 + chrX 3626258 intron AstA-R1 + chrX_5_3625001 chrX_3625001 RAL-900_125b 3786 chrX 3630496 3630569 chrX 3630622 3630695 27 126 6.0 1.5 3.8 5.6 199 chrX 3630496 intron AstA-R1 + chrX 3630596 intron AstA-R1 + chrX 3630695 intron AstA-R1 + chrX_27_3630001 chrX_3630001 RAL-900_125b 3787 chrX 3646409 3646421 chrX 3646545 3646557 5 135 6.5 11.5 9.0 0.5 148 chrX 3646409 intron AstA-R1 + chrX 3646483 intron AstA-R1 + chrX 3646557 intron AstA-R1 + chrX_5_3645001 chrX_3645001 RAL-900_125b 3788 chrX 3657366 3657444 chrX 3657496 3657574 29 129 5.5 6.0 5.8 4.3 208 chrX 3657366 intron AstA-R1 + chrX 3657470 intron AstA-R1 + chrX 3657574 intron AstA-R1 + chrX_29_3655001 chrX_3655001 RAL-900_125b 3789 chrX 3662441 3662467 chrX 3662575 3662601 5 133 16.5 0.0 8.2 0.5 160 chrX 3662441 intron AstA-R1 + chrX 3662521 intron AstA-R1 + chrX 3662601 intron AstA-R1 + chrX_5_3660001 chrX_3660001 RAL-900_125b 3790 chrX 3726735 3726790 chrX 3730172 3730182 NOF 16 3440 7.0 13.5 10.2 1.4 3447 chrX 3726735 intron tlk + chrX 3728458 intron tlk + chrX 3730182 intron tlk + chrX_16_3725001 chrX_3725001 RAL-900_125b 3791 chrX 3842301 3842345 chrX 3842569 3842612 pogo 14 268 9.5 5.0 7.2 1.7 311 chrX 3842301 intron ec + chrX 3842456 intron ec + chrX 3842612 intron ec + chrX_14_3840001 chrX_3840001 RAL-900_125b 3792 chrX 3862779 3862845 chrX 3862916 3862982 13 137 7.5 7.0 7.2 1.6 203 chrX 3862779 intergenic yin - chrX 3862880 intergenic yin - chrX 3862982 3` UTR yin - chrX_13_3860001 chrX_3860001 RAL-900_125b 3793 chrX 3866054 3866097 chrX 3866182 3866225 17 128 17.5 0.0 8.8 1.7 171 chrX 3866054 intron yin - chrX 3866140 intron yin - chrX 3866225 intron yin - chrX_17_3865001 chrX_3865001 RAL-900_125b 3794 chrX 3880457 3880485 chrX 3880593 3880621 8 136 0.0 12.5 6.2 1.1 164 chrX 3880457 intergenic VhaAC39-1 + chrX 3880539 intergenic VhaAC39-1 + chrX 3880621 intergenic VhaAC39-1 + chrX_8_3880001 chrX_3880001 RAL-900_125b 3795 chrX 3881234 3881296 chrX 3881423 3881485 20 188 11.0 6.0 8.5 2.1 251 chrX 3881234 intron VhaAC39-1 + chrX 3881360 intron VhaAC39-1 + chrX 3881485 exon VhaAC39-1 + chrX_20_3880001 chrX_3880001 RAL-900_125b 3796 chrX 3929998 3930067 chrX 3930129 3930198 24 131 8.5 7.5 8.0 2.7 200 chrX 3929998 5` UTR CG42541 - chrX 3930098 5` UTR CG42541 - chrX 3930198 5` UTR CG42541 - chrX_24_3930001 chrX_3930001 RAL-900_125b 3797 chrX 3986831 3986893 chrX 3994514 3994551 412 30 7682 4.5 10.5 7.5 3.5 7720 chrX 3986831 intergenic not near genes chrX 3990691 intergenic not near genes chrX 3994551 intergenic not near genes chrX_30_3990001 chrX_3990001 RAL-900_125b 3798 chrX 4021123 4021132 chrX 4021271 4021280 4 148 11.0 6.5 8.8 0.4 157 chrX 4021123 intergenic not near genes chrX 4021202 intergenic not near genes chrX 4021280 intergenic not near genes chrX_4_4020001 chrX_4020001 RAL-900_125b 3799 chrX 4021138 4021193 chrX 4021269 4021341 21 145 6.0 6.0 6.0 3.0 203 chrX 4021138 intergenic not near genes chrX 4021240 intergenic not near genes chrX 4021341 intergenic not near genes chrX_21_4020001 chrX_4020001 RAL-900_125b 3800 chrX 4048453 4048519 chrX 4048579 4048645 23 126 4.0 6.5 5.2 3.7 192 chrX 4048453 3` UTR CR45482 - chrX 4048549 3` UTR CR45482 - chrX 4048645 3` UTR CR45482 - chrX_23_4045001 chrX_4045001 RAL-900_125b 3801 chrX 4132626 4132695 chrX 4132845 4132899 23 218 7.0 9.0 8.0 2.6 273 chrX 4132626 3` UTR GlcAT-I + chrX 4132762 3` UTR GlcAT-I + chrX 4132899 3` UTR Fas2 - chrX_23_4130001 chrX_4130001 RAL-900_125b 3802 chrX 4152346 4152375 chrX 4152467 4152502 7 120 7.5 16.0 11.8 0.5 156 chrX 4152346 intron Fas2 - chrX 4152424 intron Fas2 - chrX 4152502 intron Fas2 - chrX_7_4150001 chrX_4150001 RAL-900_125b 3803 chrX 4157856 4157917 chrX 4164959 4164987 297 19 7101 7.0 8.0 7.5 2.2 7131 chrX 4157856 intron Fas2 - chrX 4161422 intron Fas2 - chrX 4164987 intron Fas2 - chrX_19_4160001 chrX_4160001 RAL-900_125b 3804 chrX 4209897 4209952 chrX 4210037 4210092 6 140 0.0 12.0 6.0 0.9 195 chrX 4209897 intergenic not near genes chrX 4209994 intergenic not near genes chrX 4210092 intergenic not near genes chrX_6_4205001 chrX_4205001 RAL-900_125b 3805 chrX 4216290 4216334 chrX 4216419 4216463 19 127 11.5 11.5 11.5 1.5 173 chrX 4216290 intergenic not near genes chrX 4216376 intergenic CG15571 - chrX 4216463 intergenic CG15571 - chrX_19_4215001 chrX_4215001 RAL-900_125b 3806 chrX 4229933 4229980 chrX 4230099 4230146 17 166 9.0 4.5 6.8 2.2 213 chrX 4229933 intergenic not near genes chrX 4230040 intergenic not near genes chrX 4230146 intergenic not near genes chrX_17_4230001 chrX_4230001 RAL-900_125b 3807 chrX 4302029 4302075 chrX 4302164 4302204 15 134 11.0 10.5 10.8 1.3 175 chrX 4302029 exon CG12692 - chrX 4302116 intron CG12692 - chrX 4302204 intron CG12692 - chrX_15_4300001 chrX_4300001 RAL-900_125b 3808 chrX 4324341 4324414 chrX 4324468 4324541 20 127 6.5 3.5 5.0 3.3 200 chrX 4324341 intron norpA + chrX 4324441 intron norpA + chrX 4324541 intron norpA + chrX_20_4320001 chrX_4320001 RAL-900_125b 3809 chrX 4361403 4361429 chrX 4361530 4361556 14 127 15.0 11.0 13.0 1.0 153 chrX 4361403 intron norpA + chrX 4361480 intron norpA + chrX 4361556 intron norpA + chrX_14_4360001 chrX_4360001 RAL-900_125b 3810 chrX 4365385 4365466 chrX 4365585 4365667 7 201 8.0 4.5 6.2 1.0 282 chrX 4365385 3` UTR norpA + chrX 4365526 intergenic norpA +,mir-982 - chrX 4365667 intergenic mir-982 -,norpA + chrX_7_4365001 chrX_4365001 RAL-900_125b 3811 chrX 4382332 4382382 chrX 4382462 4382512 16 130 4.0 0.0 2.0 5.3 180 chrX 4382332 3` UTR CG12688 + chrX 4382422 3` UTR CG12688 + chrX 4382512 intergenic CG12688 + chrX_16_4380001 chrX_4380001 RAL-900_125b 3812 chrX 4389379 4389380 chrX 12946233 12946235 4 8556855 22.5 34.5 28.5 0.1 8556856 chrX 4389379 intron CR32773 - chrX 8667807 intergenic not near genes chrX 12946235 3` UTR fne + chrX_4_8665001 chrX_8665001 RAL-900_125b 3813 chrX 4396941 4397003 chrX 4397066 4397138 29 131 8.0 6.0 7.0 3.6 197 chrX 4396941 intron CR32773 - chrX 4397040 intron CR32773 - chrX 4397138 intron CR32773 - chrX_29_4395001 chrX_4395001 RAL-900_125b 3814 chrX 4401058 4401082 chrX 4401183 4401211 8 128 1.0 9.5 5.2 1.3 153 chrX 4401058 intron CR32773 - chrX 4401134 intron CR32773 - chrX 4401211 intron CR32773 - chrX_8_4400001 chrX_4400001 RAL-900_125b 3815 chrX 4436467 4436474 chrX 4436595 4436607 5 132 7.5 15.0 11.2 0.4 140 chrX 4436467 intron,intron CR32773 -,bi + chrX 4436537 intron,intron CR32773 -,bi + chrX 4436607 intron,intron CR32773 -,bi + chrX_5_4435001 chrX_4435001 RAL-900_125b 3816 chrX 4436476 4436497 chrX 4436594 4436630 8 130 6.5 15.0 10.8 0.7 154 chrX 4436476 intron,intron CR32773 -,bi + chrX 4436553 intron,intron CR32773 -,bi + chrX 4436630 intron,intron CR32773 -,bi + chrX_8_4435001 chrX_4435001 RAL-900_125b 3817 chrX 4638600 4638665 chrX 4638780 4638852 20 182 8.0 8.0 8.0 2.2 252 chrX 4638600 exon pon + chrX 4638726 3` UTR pon + chrX 4638852 3` UTR pon + chrX_20_4635001 chrX_4635001 RAL-900_125b 3818 chrX 4660774 4660798 chrX 4660923 4660947 9 149 9.5 0.0 4.8 1.6 173 chrX 4660774 intron CG3009 - chrX 4660860 intron CG3009 - chrX 4660947 intron CG3009 - chrX_9_4660001 chrX_4660001 RAL-900_125b 3819 chrX 4700351 4700420 chrX 4700743 4700813 jockey 29 391 7.0 9.0 8.0 3.2 462 chrX 4700351 3` UTR ctp + chrX 4700582 3` UTR ctp + chrX 4700813 3` UTR ctp + chrX_29_4700001 chrX_4700001 RAL-900_125b 3820 chrX 4731773 4731780 chrX 4736916 4736923 jockey 5 5143 20.0 3.5 11.8 0.4 5150 chrX 4731773 intergenic not near genes chrX 4734348 intergenic not near genes chrX 4736923 intergenic not near genes chrX_5_4730001 chrX_4730001 RAL-900_125b 3821 chrX 4763213 4763272 chrX 4763751 4763810 Stalker4 19 537 11.5 9.0 10.2 1.7 597 chrX 4763213 intergenic not near genes chrX 4763512 intergenic not near genes chrX 4763810 intergenic not near genes chrX_19_4760001 chrX_4760001 RAL-900_125b 3822 chrX 4792341 4792396 chrX 4792824 4792879 jockey 22 482 7.0 10.5 8.8 2.2 538 chrX 4792341 intergenic not near genes chrX 4792610 intergenic not near genes chrX 4792879 intergenic not near genes chrX_22_4790001 chrX_4790001 RAL-900_125b 3823 chrX 4827946 4827950 chrX 4835348 4835371 Stalker4 4 7412 11.5 6.0 8.8 0.4 7425 chrX 4827946 intergenic not near genes chrX 4831658 intergenic not near genes chrX 4835371 intergenic not near genes chrX_4_4830001 chrX_4830001 RAL-900_125b 3824 chrX 4827956 4827998 chrX 4835338 4835419 Stalker4 13 7409 4.5 5.5 5.0 2.2 7463 chrX 4827956 intergenic not near genes chrX 4831688 intergenic not near genes chrX 4835419 intergenic not near genes chrX_13_4830001 chrX_4830001 RAL-900_125b 3825 chrX 4878832 4878907 chrX 4878991 4879066 25 159 5.0 0.0 2.5 7.1 234 chrX 4878832 intron CG42594 + chrX 4878949 intron CG42594 + chrX 4879066 intron CG42594 + chrX_25_4875001 chrX_4875001 RAL-900_125b 3826 chrX 4885729 4885804 chrX 4885871 4885910 23 136 6.5 7.0 6.8 2.9 181 chrX 4885729 intron CG42594 + chrX 4885820 intron CG42594 + chrX 4885910 intron CG42594 + chrX_23_4885001 chrX_4885001 RAL-900_125b 3827 chrX 4931303 4931377 chrX 4931447 4931509 62 143 18.0 14.0 16.0 3.6 206 chrX 4931303 intron CG44774 - chrX 4931406 intron CG44774 - chrX 4931509 intron CG44774 - chrX_62_4930001 chrX_4930001 RAL-900_125b 3828 chrX 4990001 4990065 chrX 4997265 4997329 roo 20 7263 11.5 5.0 8.2 2.2 7328 chrX 4990001 intron CR44833 - chrX 4993665 intron CR44833 - chrX 4997329 intron CR44833 - chrX_20_4990001 chrX_4990001 RAL-900_125b 3829 chrX 5096236 5096300 chrX 5103851 5103915 springer 15 7614 4.5 8.0 6.2 2.1 7679 chrX 5096236 intron,intron CG15465 +,rg + chrX 5100076 intron,intron CG15465 +,rg + chrX 5103915 intron,intron CG15465 +,rg + chrX_15_5100001 chrX_5100001 RAL-900_125b 3830 chrX 5120613 5120648 chrX 5120771 5120800 9 154 6.0 5.5 5.8 1.3 187 chrX 5120613 intron,intron CG15465 +,rg + chrX 5120706 intron,intron CG15465 +,rg + chrX 5120800 intron,intron CG15465 +,rg + chrX_9_5120001 chrX_5120001 RAL-900_125b 3831 chrX 5137701 5137765 chrX 5137938 5138002 21 237 10.5 9.0 9.8 1.9 301 chrX 5137701 intron,intron CG15465 +,rg + chrX 5137852 intron,intron CG15465 +,rg + chrX 5138002 intron,intron CG15465 +,rg + chrX_21_5135001 chrX_5135001 RAL-900_125b 3832 chrX 5159680 5159751 chrX 5159825 5159870 22 144 6.0 4.5 5.2 3.5 190 chrX 5159680 intron,intron CG15465 +,rg + chrX 5159775 intron,intron CG15465 +,rg + chrX 5159870 intron,intron CG15465 +,rg + chrX_22_5155001 chrX_5155001 RAL-900_125b 3833 chrX 5206254 5206331 chrX 5206577 5206639 27 320 5.5 4.5 5.0 4.5 385 chrX 5206254 intron,intron CG15465 +,rg + chrX 5206446 intron,intron CG15465 +,rg + chrX 5206639 intron,intron CG15465 +,rg + chrX_27_5205001 chrX_5205001 RAL-900_125b 3834 chrX 5338662 5338721 chrX 5339965 5339994 jockey 18 1296 8.0 4.5 6.2 2.5 1332 chrX 5338662 intergenic not near genes chrX 5339328 intergenic not near genes chrX 5339994 intergenic SK + chrX_18_5335001 chrX_5335001 RAL-900_125b 3835 chrX 5350285 5350313 chrX 5350414 5350442 7 127 11.0 11.5 11.2 0.6 157 chrX 5350285 intron SK + chrX 5350364 intron SK + chrX 5350442 intron SK + chrX_7_5350001 chrX_5350001 RAL-900_125b 3836 chrX 5363584 5363655 chrX 5363724 5363795 10 138 8.5 5.0 6.8 1.3 211 chrX 5363584 intron SK + chrX 5363690 intron SK + chrX 5363795 intron SK + chrX_10_5360001 chrX_5360001 RAL-900_125b 3837 chrX 5366262 5366326 chrX 5366440 5366504 26 178 9.5 11.0 10.2 2.3 242 chrX 5366262 intron SK + chrX 5366383 intron SK + chrX 5366504 intron SK + chrX_26_5365001 chrX_5365001 RAL-900_125b 3838 chrX 5456553 5456612 chrX 5456719 5456763 15 165 2.0 6.5 4.2 2.9 210 chrX 5456553 intron SPR + chrX 5456658 intron SPR + chrX 5456763 intron SPR + chrX_15_5455001 chrX_5455001 RAL-900_125b 3839 chrX 5473544 5473620 chrX 5473670 5473720 24 120 6.5 4.5 5.5 3.7 176 chrX 5473544 intron SPR + chrX 5473632 intron SPR + chrX 5473720 intron SPR + chrX_24_5470001 chrX_5470001 RAL-900_125b 3840 chrX 5481071 5481091 chrX 5485081 5485101 I-element 9 4010 0.0 7.0 3.5 2.0 4030 chrX 5481071 intron SPR + chrX 5483086 intron SPR + chrX 5485101 intron SPR + chrX_9_5480001 chrX_5480001 RAL-900_125b 3841 chrX 5524795 5524828 chrX 5528704 5528737 412 13 3909 12.0 2.0 7.0 1.6 3942 chrX 5524795 intergenic snoRNA:Psi28S-3342 - chrX 5526766 intergenic not near genes chrX 5528737 intergenic Vsx2 - chrX_13_5525001 chrX_5525001 RAL-900_125b 3842 chrX 5577289 5577352 chrX 5577457 5577520 25 168 6.5 5.0 5.8 3.7 231 chrX 5577289 intergenic not near genes chrX 5577404 intergenic not near genes chrX 5577520 intergenic not near genes chrX_25_5575001 chrX_5575001 RAL-900_125b 3843 chrX 5727376 5727394 chrX 5732165 5732183 Doc 8 4789 3.0 9.0 6.0 1.1 4807 chrX 5727376 intron CG32758 - chrX 5729780 intron CG32758 - chrX 5732183 intron CG32758 - chrX_8_5725001 chrX_5725001 RAL-900_125b 3844 chrX 5727399 5727416 chrX 5732163 5732205 Doc 11 4786 2.0 8.5 5.2 1.8 4806 chrX 5727399 intron CG32758 - chrX 5729802 intron CG32758 - chrX 5732205 intron CG32758 - chrX_11_5725001 chrX_5725001 RAL-900_125b 3845 chrX 5798855 5798875 chrX 5799052 5799087 6 205 0.0 14.5 7.2 0.7 232 chrX 5798855 intergenic not near genes chrX 5798971 intergenic not near genes chrX 5799087 intergenic not near genes chrX_6_5795001 chrX_5795001 RAL-900_125b 3846 chrX 5798880 5798890 chrX 5799031 5799102 8 199 0.0 9.5 4.8 1.4 222 chrX 5798880 intergenic not near genes chrX 5798991 intergenic not near genes chrX 5799102 intergenic not near genes chrX_8_5795001 chrX_5795001 RAL-900_125b 3847 chrX 5848709 5848781 chrX 5848968 5849040 30 255 7.0 6.5 6.8 3.8 331 chrX 5848709 intergenic not near genes chrX 5848874 intergenic not near genes chrX 5849040 intergenic not near genes chrX_30_5845001 chrX_5845001 RAL-900_125b 3848 chrX 5883768 5883830 chrX 5884059 5884121 pogo 21 291 10.0 6.5 8.2 2.3 353 chrX 5883768 intron CR45668 - chrX 5883944 intron CR45668 - chrX 5884121 intron CR45668 - chrX_21_5880001 chrX_5880001 RAL-900_125b 3849 chrX 5884120 5884186 chrX 5884411 5884477 pogo 22 291 5.5 10.5 8.0 2.4 357 chrX 5884120 intron CR45668 - chrX 5884298 intron CR45668 - chrX 5884477 intron CR45668 - chrX_22_5880001 chrX_5880001 RAL-900_125b 3850 chrX 5953749 5953772 chrX 5953904 5953947 8 166 13.5 17.0 15.2 0.5 198 chrX 5953749 exon CG6048 + chrX 5953848 exon CG6048 + chrX 5953947 exon CG6048 + chrX_8_5950001 chrX_5950001 RAL-900_125b 3851 chrX 6003275 6003297 chrX 6003406 6003428 10 131 2.0 10.5 6.2 1.4 153 chrX 6003275 intron CR44498 + chrX 6003352 intron CR44498 + chrX 6003428 intron CR44498 + chrX_10_6000001 chrX_6000001 RAL-900_125b 3852 chrX 6071413 6071435 chrX 6071545 6071577 9 136 6.0 7.5 6.8 1.2 164 chrX 6071413 intron Tsp5D - chrX 6071495 intron Tsp5D - chrX 6071577 intron Tsp5D - chrX_9_6070001 chrX_6070001 RAL-900_125b 3853 chrX 6144842 6144920 chrX 6145110 6145176 27 267 8.5 8.0 8.2 2.9 334 chrX 6144842 intron Ca-alpha1T - chrX 6145009 intron Ca-alpha1T - chrX 6145176 intron Ca-alpha1T - chrX_27_6145001 chrX_6145001 RAL-900_125b 3854 chrX 6171549 6171597 chrX 6179032 6179080 Quasimodo 19 7482 12.0 7.0 9.5 1.8 7531 chrX 6171549 intron Ca-alpha1T - chrX 6175314 intron Ca-alpha1T - chrX 6179080 intron Ca-alpha1T - chrX_19_6175001 chrX_6175001 RAL-900_125b 3855 chrX 6219396 6219468 chrX 6219528 6219575 33 130 8.0 6.0 7.0 4.1 179 chrX 6219396 intergenic Btd - chrX 6219486 intergenic Btd -,Efr + chrX 6219575 intergenic Btd -,Efr + chrX_33_6215001 chrX_6215001 RAL-900_125b 3856 chrX 6320023 6320079 chrX 6320181 6320237 21 155 6.0 15.0 10.5 1.8 214 chrX 6320023 intron CG15894 + chrX 6320130 intron CG15894 + chrX 6320237 intron CG15894 + chrX_21_6320001 chrX_6320001 RAL-900_125b 3857 chrX 6328483 6328505 chrX 6328631 6328658 6 152 9.0 10.0 9.5 0.6 175 chrX 6328483 3` UTR CG15894 + chrX 6328570 3` UTR CG15894 + chrX 6328658 3` UTR CG15894 + chrX_6_6325001 chrX_6325001 RAL-900_125b 3858 chrX 6335217 6335240 chrX 6337720 6337800 Tirant 9 2553 1.0 4.5 2.8 2.4 2583 chrX 6335217 intergenic not near genes chrX 6336508 intergenic not near genes chrX 6337800 5` UTR CG3842 + chrX_9_6335001 chrX_6335001 RAL-900_125b 3859 chrX 6388622 6388695 chrX 6388748 6388809 29 125 11.0 6.5 8.8 3.0 187 chrX 6388622 intergenic not near genes chrX 6388716 intergenic not near genes chrX 6388809 intergenic not near genes chrX_29_6385001 chrX_6385001 RAL-900_125b 3860 chrX 6392830 6392890 chrX 6397640 6397705 Doc 23 4814 9.0 4.5 6.8 2.9 4875 chrX 6392830 intergenic not near genes chrX 6395268 intergenic not near genes chrX 6397705 intergenic not near genes chrX_23_6395001 chrX_6395001 RAL-900_125b 3861 chrX 6402067 6402131 chrX 6402194 6402258 28 126 6.5 7.0 6.8 3.6 191 chrX 6402067 intergenic not near genes chrX 6402162 intergenic not near genes chrX 6402258 intergenic not near genes chrX_28_6400001 chrX_6400001 RAL-900_125b 3862 chrX 6429970 6429993 chrX 6435482 6435510 Rt1c 11 5514 13.5 11.0 12.2 0.8 5540 chrX 6429970 intron CG42340 - chrX 6432740 intron CG42340 - chrX 6435510 intron CG42340 - chrX_11_6430001 chrX_6430001 RAL-900_125b 3863 chrX 6539867 6539941 chrX 6540019 6540093 18 152 6.5 5.5 6.0 2.6 226 chrX 6539867 intergenic not near genes chrX 6539980 intergenic not near genes chrX 6540093 intergenic not near genes chrX_18_6535001 chrX_6535001 RAL-900_125b 3864 chrX 6562791 6562846 chrX 6571316 6571353 Tirant 19 8523 7.0 10.0 8.5 2.0 8562 chrX 6562791 intron CG34417 + chrX 6567072 intron CG34417 + chrX 6571353 intron CG34417 + chrX_19_6565001 chrX_6565001 RAL-900_125b 3865 chrX 6591806 6591851 chrX 6591941 6591986 19 135 11.0 0.0 5.5 2.9 180 chrX 6591806 intron Pat1 + chrX 6591896 intron Pat1 + chrX 6591986 intron Pat1 + chrX_19_6590001 chrX_6590001 RAL-900_125b 3866 chrX 6605448 6605495 chrX 6608514 6608565 Burdock 13 3071 6.0 13.5 9.8 1.2 3117 chrX 6605448 intron pigs + chrX 6607006 intron pigs + chrX 6608565 intron pigs + chrX_13_6605001 chrX_6605001 RAL-900_125b 3867 chrX 6618423 6618471 chrX 6618551 6618589 15 124 10.5 10.5 10.5 1.3 166 chrX 6618423 intron pigs + chrX 6618506 intron pigs + chrX 6618589 intron pigs + chrX_15_6615001 chrX_6615001 RAL-900_125b 3868 chrX 6733415 6733666 chrX 6733532 6733805 21 132 12.5 9.5 11.0 1.8 390 chrX 6733415 intron,intron CG3168 -,CR43461 + chrX 6733610 intron,intron CG3168 -,CR43461 + chrX 6733805 intron,intron CG3168 -,CR43461 + chrX_21_6730001 chrX_6730001 RAL-900_125b 3869 chrX 6737479 6737549 chrX 6737611 6737680 19 131 10.0 8.5 9.2 1.9 201 chrX 6737479 intron CG3168 - chrX 6737580 intron CG3168 - chrX 6737680 intron CG3168 - chrX_19_6735001 chrX_6735001 RAL-900_125b 3870 chrX 6792052 6792085 chrX 6792188 6792221 6 135 7.0 9.5 8.2 0.7 169 chrX 6792052 intron C3G - chrX 6792136 intron C3G - chrX 6792221 intron C3G - chrX_6_6790001 chrX_6790001 RAL-900_125b 3871 chrX 6814235 6814301 chrX 6814363 6814422 11 123 5.5 1.0 3.2 2.6 187 chrX 6814235 exon iav + chrX 6814328 intron iav + chrX 6814422 intron iav + chrX_11_6810001 chrX_6810001 RAL-900_125b 3872 chrX 6856692 6856716 chrX 6856838 6856863 10 147 11.0 4.5 7.8 1.1 171 chrX 6856692 intron CG14434 - chrX 6856778 intron CG14434 - chrX 6856863 intron CG14434 - chrX_10_6855001 chrX_6855001 RAL-900_125b 3873 chrX 6897565 6897709 chrX 6897693 6897869 28 154 0.0 0.0 0.0 28.0 304 chrX 6897565 intergenic not near genes chrX 6897717 intergenic not near genes chrX 6897869 intergenic not near genes chrX_28_6895001 chrX_6895001 RAL-900_125b 3874 chrX 6901336 6901384 chrX 6901454 6901510 13 123 6.5 9.0 7.8 1.5 174 chrX 6901336 intergenic not near genes chrX 6901423 intergenic not near genes chrX 6901510 intergenic not near genes chrX_13_6900001 chrX_6900001 RAL-900_125b 3875 chrX 7023558 7023633 chrX 7030998 7031018 Tabor 33 7437 6.0 9.0 7.5 3.9 7460 chrX 7023558 intron CG12541 - chrX 7027288 intron CG12541 - chrX 7031018 intron CG12541 - chrX_33_7025001 chrX_7025001 RAL-900_125b 3876 chrX 7047440 7047512 chrX 7047579 7047653 29 139 7.0 3.5 5.2 4.7 213 chrX 7047440 intron CG12541 - chrX 7047546 intron CG12541 - chrX 7047653 intron CG12541 - chrX_29_7045001 chrX_7045001 RAL-900_125b 3877 chrX 7125219 7125265 chrX 7134428 7134474 roo 19 9208 0.5 9.5 5.0 3.2 9255 chrX 7125219 intergenic not near genes chrX 7129846 intergenic not near genes chrX 7134474 intergenic not near genes chrX_19_7125001 chrX_7125001 RAL-900_125b 3878 chrX 7376940 7376949 chrX 7377072 7377081 4 132 8.5 6.5 7.5 0.5 141 chrX 7376940 intron,intron CR44357 -,CG1677 - chrX 7377010 intron,intron CR44357 -,CG1677 - chrX 7377081 intron,intron CR44357 -,CG1677 - chrX_4_7375001 chrX_7375001 RAL-900_125b 3879 chrX 7464992 7465022 chrX 7465088 7465123 4 105 2.5 6.5 4.5 0.7 131 chrX 7464992 intergenic not near genes chrX 7465058 intergenic not near genes chrX 7465123 intergenic not near genes chrX_4_7465001 chrX_7465001 RAL-900_125b 3880 chrX 7570591 7570667 chrX 7570775 7570851 22 183 4.5 6.5 5.5 3.4 260 chrX 7570591 intergenic not near genes chrX 7570721 intergenic not near genes chrX 7570851 intergenic not near genes chrX_22_7570001 chrX_7570001 RAL-900_125b 3881 chrX 7605324 7605350 chrX 7605450 7605476 5 126 0.5 5.5 3.0 1.2 152 chrX 7605324 intergenic not near genes chrX 7605400 intergenic not near genes chrX 7605476 intergenic not near genes chrX_5_7605001 chrX_7605001 RAL-900_125b 3882 chrX 7702448 7702525 chrX 7702602 7702667 17 142 0.0 10.0 5.0 2.8 219 chrX 7702448 intron CHES-1-like - chrX 7702558 intron CHES-1-like - chrX 7702667 intron CHES-1-like - chrX_17_7700001 chrX_7700001 RAL-900_125b 3883 chrX 7702864 7702923 chrX 7703353 7703412 jockey 24 488 7.5 6.5 7.0 3.0 548 chrX 7702864 intron CHES-1-like - chrX 7703138 intron CHES-1-like - chrX 7703412 intron CHES-1-like - chrX_24_7700001 chrX_7700001 RAL-900_125b 3884 chrX 7720515 7720583 chrX 7720637 7720715 17 129 2.0 0.0 1.0 8.5 200 chrX 7720515 intergenic not near genes chrX 7720615 intergenic not near genes chrX 7720715 intergenic not near genes chrX_17_7720001 chrX_7720001 RAL-900_125b 3885 chrX 7737080 7737148 chrX 7737242 7737310 19 162 6.0 5.5 5.8 2.8 230 chrX 7737080 5` UTR Tom40 + chrX 7737195 intron Tom40 + chrX 7737310 intron Tom40 + chrX_19_7735001 chrX_7735001 RAL-900_125b 3886 chrX 7845680 7845685 chrX 7847221 7847226 hopper2 4 1541 19.5 10.0 14.8 0.3 1546 chrX 7845680 intergenic not near genes chrX 7846453 intergenic not near genes chrX 7847226 intergenic not near genes chrX_4_7845001 chrX_7845001 RAL-900_125b 3887 chrX 7845687 7845751 chrX 7847220 7847292 hopper2 20 1538 10.0 10.0 10.0 1.8 1605 chrX 7845687 intergenic not near genes chrX 7846490 intergenic not near genes chrX 7847292 intergenic not near genes chrX_20_7845001 chrX_7845001 RAL-900_125b 3888 chrX 7960830 7960907 chrX 7960969 7961046 24 139 5.5 7.5 6.5 3.2 216 chrX 7960830 intron,5` UTR sws -,CR45620 + chrX 7960938 intron sws - chrX 7961046 intron sws - chrX_24_7960001 chrX_7960001 RAL-900_125b 3889 chrX 8031403 8031452 chrX 8035762 8035811 Juan 14 4359 3.0 8.5 5.8 2.1 4408 chrX 8031403 intergenic not near genes chrX 8033607 intergenic not near genes chrX 8035811 3` UTR CG2233 - chrX_14_8030001 chrX_8030001 RAL-900_125b 3890 chrX 8038861 8038889 chrX 8038993 8039021 11 132 12.5 1.5 7.0 1.4 160 chrX 8038861 3` UTR fs(1)h - chrX 8038941 3` UTR fs(1)h - chrX 8039021 3` UTR fs(1)h - chrX_11_8035001 chrX_8035001 RAL-900_125b 3891 chrX 8083514 8083531 chrX 8083641 8083658 7 127 6.5 10.0 8.2 0.8 144 chrX 8083514 intergenic not near genes chrX 8083586 intergenic CG2256 - chrX 8083658 intergenic CG2256 - chrX_7_8080001 chrX_8080001 RAL-900_125b 3892 chrX 8085527 8085598 chrX 8085663 8085734 29 135 4.5 8.0 6.2 4.0 207 chrX 8085527 intron,5` UTR CG2256 -,CR45535 + chrX 8085630 intron,5` UTR CG2256 -,CR45535 + chrX 8085734 intron,5` UTR CG2256 -,CR45535 + chrX_29_8085001 chrX_8085001 RAL-900_125b 3893 chrX 8232110 8232167 chrX 8232237 8232294 11 127 14.0 9.5 11.8 0.9 184 chrX 8232110 intron sdt + chrX 8232202 intron sdt + chrX 8232294 intron sdt + chrX_11_8230001 chrX_8230001 RAL-900_125b 3894 chrX 8327245 8327273 chrX 8327374 8327394 7 128 6.5 15.0 10.8 0.6 149 chrX 8327245 intron nAChRalpha3 - chrX 8327320 intron nAChRalpha3 - chrX 8327394 intron nAChRalpha3 - chrX_7_8325001 chrX_8325001 RAL-900_125b 3895 chrX 8377870 8377898 chrX 8377997 8378025 13 127 8.5 5.0 6.8 1.7 155 chrX 8377870 intergenic not near genes chrX 8377948 intergenic not near genes chrX 8378025 intergenic not near genes chrX_13_8375001 chrX_8375001 RAL-900_125b 3896 chrX 8421462 8421463 chrX 8421603 8421605 4 142 11.5 13.0 12.2 0.3 143 chrX 8421462 intron Trf2 + chrX 8421534 intron Trf2 + chrX 8421605 intron Trf2 + chrX_4_8420001 chrX_8420001 RAL-900_125b 3897 chrX 8421464 8421480 chrX 8421550 8421622 9 132 7.0 5.5 6.2 1.2 158 chrX 8421464 intron Trf2 + chrX 8421543 intron Trf2 + chrX 8421622 intron Trf2 + chrX_9_8420001 chrX_8420001 RAL-900_125b 3898 chrX 8440741 8440757 chrX 8440879 8440895 6 138 8.0 10.5 9.2 0.6 154 chrX 8440741 exon CG1440 + chrX 8440818 3` UTR CG1440 + chrX 8440895 3` UTR CG1440 + chrX_6_8440001 chrX_8440001 RAL-900_125b 3899 chrX 8500882 8500958 chrX 8501096 8501173 15 214 9.5 0.0 4.8 2.6 291 chrX 8500882 intron CG33181 + chrX 8501028 intron CG33181 + chrX 8501173 intron CG33181 + chrX_15_8500001 chrX_8500001 RAL-900_125b 3900 chrX 8513048 8513121 chrX 8513365 8513438 29 317 6.5 5.5 6.0 4.1 390 chrX 8513048 intron CG33181 + chrX 8513243 intron CG33181 + chrX 8513438 intron CG33181 + chrX_29_8510001 chrX_8510001 RAL-900_125b 3901 chrX 8536717 8536777 chrX 8536843 8536903 18 126 11.5 13.5 12.5 1.3 186 chrX 8536717 intron Nrg + chrX 8536810 intron Nrg + chrX 8536903 intron Nrg + chrX_18_8535001 chrX_8535001 RAL-900_125b 3902 chrX 8668921 8668928 chrX 8669048 8669055 4 127 12.5 2.5 7.5 0.5 134 chrX 8668921 intergenic not near genes chrX 8668988 intergenic not near genes chrX 8669055 intergenic not near genes chrX_4_8665001 chrX_8665001 RAL-900_125b 3903 chrX 8730448 8730458 chrX 8730568 8730584 6 125 3.0 14.5 8.8 0.6 136 chrX 8730448 intergenic not near genes chrX 8730516 intergenic not near genes chrX 8730584 intergenic not near genes chrX_6_8730001 chrX_8730001 RAL-900_125b 3904 chrX 8771187 8771249 chrX 8771315 8771377 5 128 2.5 4.5 3.5 1.1 190 chrX 8771187 intron Lim1 - chrX 8771282 intron Lim1 - chrX 8771377 intron Lim1 - chrX_5_8770001 chrX_8770001 RAL-900_125b 3905 chrX 8832228 8832280 chrX 8832354 8832406 8 126 2.5 5.5 4.0 1.6 178 chrX 8832228 intergenic not near genes chrX 8832317 intergenic not near genes chrX 8832406 intergenic not near genes chrX_8_8830001 chrX_8830001 RAL-900_125b 3906 chrX 8860773 8860794 chrX 8860907 8860928 6 134 0.0 12.0 6.0 0.9 155 chrX 8860773 intron CG12075 + chrX 8860850 intron CG12075 + chrX 8860928 intron CG12075 + chrX_6_8860001 chrX_8860001 RAL-900_125b 3907 chrX 8877742 8877811 chrX 8877916 8877985 14 174 6.0 8.0 7.0 1.8 243 chrX 8877742 intron Moe - chrX 8877864 intron Moe - chrX 8877985 intron Moe - chrX_14_8875001 chrX_8875001 RAL-900_125b 3908 chrX 8885628 8885694 chrX 8885778 8885844 28 150 0.5 7.0 3.8 5.8 216 chrX 8885628 intron Moe - chrX 8885736 intron Moe - chrX 8885844 intron Moe - chrX_28_8885001 chrX_8885001 RAL-900_125b 3909 chrX 8922286 8922354 chrX 8922770 8922838 jockey 22 484 8.0 5.5 6.8 2.8 552 chrX 8922286 intron rdgA + chrX 8922562 intron rdgA + chrX 8922838 intron rdgA + chrX_22_8920001 chrX_8920001 RAL-900_125b 3910 chrX 8927551 8927609 chrX 8929861 8929929 NOF 20 2319 8.0 9.5 8.8 2.0 2378 chrX 8927551 intron rdgA + chrX 8928740 intron rdgA + chrX 8929929 intron rdgA + chrX_20_8925001 chrX_8925001 RAL-900_125b 3911 chrX 8939976 8940052 chrX 8940129 8940205 19 151 5.5 8.0 6.8 2.4 229 chrX 8939976 intron rdgA + chrX 8940090 intron rdgA + chrX 8940205 intron rdgA + chrX_19_8940001 chrX_8940001 RAL-900_125b 3912 chrX 8948714 8948785 chrX 8956274 8956345 roo 26 7559 9.0 5.0 7.0 3.2 7631 chrX 8948714 intron rdgA + chrX 8952530 intron rdgA + chrX 8956345 intron rdgA + chrX_26_8950001 chrX_8950001 RAL-900_125b 3913 chrX 8968817 8968850 chrX 8968944 8968976 9 126 16.0 15.0 15.5 0.5 159 chrX 8968817 intron rdgA + chrX 8968896 intron rdgA + chrX 8968976 intron rdgA + chrX_9_8965001 chrX_8965001 RAL-900_125b 3914 chrX 8971840 8971903 chrX 8971969 8972032 26 128 8.5 0.5 4.5 4.7 192 chrX 8971840 intron rdgA + chrX 8971936 intron rdgA + chrX 8972032 intron rdgA + chrX_26_8970001 chrX_8970001 RAL-900_125b 3915 chrX 9175924 9175949 chrX 9176054 9176079 13 130 17.5 6.5 12.0 1.0 155 chrX 9175924 3` UTR mei-P26 + chrX 9176002 3` UTR mei-P26 + chrX 9176079 3` UTR mei-P26 + chrX_13_9175001 chrX_9175001 RAL-900_125b 3916 chrX 9190739 9190782 chrX 9190882 9190927 6 143 16.0 8.0 12.0 0.5 188 chrX 9190739 intergenic CG12115 - chrX 9190833 intergenic CG12115 - chrX 9190927 intergenic CG12115 - chrX_6_9190001 chrX_9190001 RAL-900_125b 3917 chrX 9218040 9218095 chrX 9218181 9218236 11 141 10.0 5.5 7.8 1.2 196 chrX 9218040 3` UTR t - chrX 9218138 3` UTR t - chrX 9218236 exon t - chrX_11_9215001 chrX_9215001 RAL-900_125b 3918 chrX 9294488 9294501 chrX 9294616 9294629 5 128 10.0 7.5 8.8 0.5 141 chrX 9294488 intron lz + chrX 9294558 intron lz + chrX 9294629 intron lz + chrX_5_9290001 chrX_9290001 RAL-900_125b 3919 chrX 9308578 9308831 chrX 9308705 9308966 32 130 12.5 12.5 12.5 2.4 388 chrX 9308578 intergenic not near genes chrX 9308772 intergenic not near genes chrX 9308966 intergenic not near genes chrX_32_9305001 chrX_9305001 RAL-900_125b 3920 chrX 9337912 9337966 chrX 9338047 9338090 12 137 5.5 8.5 7.0 1.5 178 chrX 9337912 intron CG34449 - chrX 9338001 intron CG34449 - chrX 9338090 exon CG34449 - chrX_12_9335001 chrX_9335001 RAL-900_125b 3921 chrX 9503211 9503211 chrX 22383088 22383377 20 12880107 25.5 273.0 149.2 0.1 12880166 chrX 9503211 3` UTR CG32700 - chrX 15943294 intron CG8924 + chrX 22383377 intergenic not near genes chrX_20_15940001 chrX_15940001 RAL-900_125b 3922 chrX 9508096 9508158 chrX 9509664 9509726 jockey 23 1567 8.5 7.0 7.8 2.6 1630 chrX 9508096 intron CG32700 - chrX 9508911 intron CG32700 - chrX 9509726 intron CG32700 - chrX_23_9505001 chrX_9505001 RAL-900_125b 3923 chrX 9514048 9514101 chrX 9514174 9514237 17 131 5.5 7.0 6.2 2.4 189 chrX 9514048 intron CG32700 - chrX 9514142 intron CG32700 - chrX 9514237 intron CG32700 - chrX_17_9510001 chrX_9510001 RAL-900_125b 3924 chrX 9575743 9575778 chrX 9576117 9576152 mdg3 15 374 16.0 10.5 13.2 1.1 409 chrX 9575743 intron,exon CG32699 -,CG42395 - chrX 9575948 intron,intron CG32699 -,CG42395 - chrX 9576152 intron,5` UTR CG32699 -,CG42395 - chrX_15_9575001 chrX_9575001 RAL-900_125b 3925 chrX 9575780 9575817 chrX 9576114 9576191 mdg3 6 362 9.5 10.5 10.0 0.5 411 chrX 9575780 intron,exon CG32699 -,CG42395 - chrX 9575986 intron,intron CG32699 -,CG42395 - chrX 9576191 intron,5` UTR CG32699 -,CG42395 - chrX_6_9575001 chrX_9575001 RAL-900_125b 3926 chrX 9576994 9577061 chrX 9577494 9577561 22 500 8.5 9.0 8.8 2.2 567 chrX 9576994 intron CG32699 - chrX 9577278 intron CG32699 - chrX 9577561 intron CG32699 - chrX_22_9575001 chrX_9575001 RAL-900_125b 3927 chrX 9732329 9732381 chrX 9732456 9732513 8 128 4.5 6.5 5.5 1.2 184 chrX 9732329 intron Sp1 + chrX 9732421 intron Sp1 + chrX 9732513 intron Sp1 + chrX_8_9730001 chrX_9730001 RAL-900_125b 3928 chrX 9758005 9758052 chrX 9758140 9758187 13 135 12.0 0.0 6.0 1.9 182 chrX 9758005 intergenic not near genes chrX 9758096 intergenic not near genes chrX 9758187 intergenic not near genes chrX_13_9755001 chrX_9755001 RAL-900_125b 3929 chrX 9784126 9784200 chrX 9784364 9784434 26 232 6.5 6.5 6.5 3.5 308 chrX 9784126 intron CG32698 + chrX 9784280 intron CG32698 + chrX 9784434 intron CG32698 + chrX_26_9780001 chrX_9780001 RAL-900_125b 3930 chrX 9839300 9839366 chrX 9839433 9839498 16 133 0.0 7.0 3.5 3.6 198 chrX 9839300 intron CG32698 + chrX 9839399 intron CG32698 + chrX 9839498 intron CG32698 + chrX_16_9835001 chrX_9835001 RAL-900_125b 3931 chrX 9993301 9993376 chrX 9993499 9993574 21 198 3.5 5.0 4.2 4.0 273 chrX 9993301 intron CG32694 + chrX 9993438 intron CG32694 + chrX 9993574 intron CG32694 + chrX_21_9990001 chrX_9990001 RAL-900_125b 3932 chrX 9998979 9999039 chrX 9999108 9999166 32 129 5.5 0.5 3.0 8.0 187 chrX 9998979 intron CG32694 + chrX 9999072 intron CG32694 + chrX 9999166 intron CG32694 + chrX_32_9995001 chrX_9995001 RAL-900_125b 3933 chrX 10133586 10133599 chrX 10133723 10133736 4 136 16.0 15.0 15.5 0.2 150 chrX 10133586 intron,intron RhoU +,CR44894 - chrX 10133661 intron,intron RhoU +,CR44894 - chrX 10133736 intron,intron RhoU +,CR44894 - chrX_4_10130001 chrX_10130001 RAL-900_125b 3934 chrX 10138177 10138185 chrX 10145731 10145739 412 5 7554 17.5 8.0 12.8 0.4 7562 chrX 10138177 intron,intron RhoU +,CR44894 - chrX 10141958 intron,intron RhoU +,CR44894 - chrX 10145739 intron,intron RhoU +,CR44894 - chrX_5_10140001 chrX_10140001 RAL-900_125b 3935 chrX 10138192 10138240 chrX 10145726 10145794 412 26 7553 7.5 8.0 7.8 3.0 7602 chrX 10138192 intron,intron RhoU +,CR44894 - chrX 10141993 intron,intron RhoU +,CR44894 - chrX 10145794 intron,intron RhoU +,CR44894 - chrX_26_10140001 chrX_10140001 RAL-900_125b 3936 chrX 10151880 10151938 chrX 10152007 10152065 21 124 4.5 8.0 6.2 2.9 185 chrX 10151880 intron CR44894 - chrX 10151972 intron CR44894 - chrX 10152065 intron CR44894 - chrX_21_10150001 chrX_10150001 RAL-900_125b 3937 chrX 10216799 10216845 chrX 10216930 10216976 16 128 11.0 6.0 8.5 1.7 177 chrX 10216799 3` UTR l(1)G0230 + chrX 10216888 3` UTR l(1)G0230 + chrX 10216976 3` UTR l(1)G0230 + chrX_16_10215001 chrX_10215001 RAL-900_125b 3938 chrX 10267295 10267321 chrX 10276495 10276521 roo 13 9200 0.0 14.0 7.0 1.6 9226 chrX 10267295 3` UTR alpha-Man-I - chrX 10271908 intron alpha-Man-I - chrX 10276521 3` UTR alpha-Man-I - chrX_13_10270001 chrX_10270001 RAL-900_125b 3939 chrX 10295206 10295276 chrX 10295655 10295725 29 449 8.0 5.5 6.8 3.7 519 chrX 10295206 intron alpha-Man-I - chrX 10295466 intron alpha-Man-I - chrX 10295725 intron alpha-Man-I - chrX_29_10295001 chrX_10295001 RAL-900_125b 3940 chrX 10317524 10317578 chrX 10317650 10317706 28 127 0.5 10.0 5.2 4.5 182 chrX 10317524 intron alpha-Man-I - chrX 10317615 intron alpha-Man-I - chrX 10317706 intron alpha-Man-I - chrX_28_10315001 chrX_10315001 RAL-900_125b 3941 chrX 10348754 10348817 chrX 10356369 10356432 springer 19 7615 12.0 8.0 10.0 1.7 7678 chrX 10348754 intergenic snoRNA:U3:9B + chrX 10352593 intergenic not near genes chrX 10356432 intergenic l(1)G0289 - chrX_19_10350001 chrX_10350001 RAL-900_125b 3942 chrX 10446637 10446709 chrX 10446769 10446841 27 132 10.0 5.5 7.8 3.1 204 chrX 10446637 intron CG32683 - chrX 10446739 intron CG32683 - chrX 10446841 intron CG32683 - chrX_27_10445001 chrX_10445001 RAL-900_125b 3943 chrX 10453023 10453096 chrX 10453264 10453337 27 240 1.5 5.5 3.5 6.0 314 chrX 10453023 intron CG32683 - chrX 10453180 intron CG32683 - chrX 10453337 intron CG32683 - chrX_27_10450001 chrX_10450001 RAL-900_125b 3944 chrX 10525034 10525075 chrX 10532141 10532192 297 10 7116 15.0 10.5 12.8 0.7 7158 chrX 10525034 intron spri - chrX 10528613 intron spri - chrX 10532192 intron spri - chrX_10_10525001 chrX_10525001 RAL-900_125b 3945 chrX 10532465 10532526 chrX 10532594 10532653 22 128 9.5 10.0 9.8 2.0 188 chrX 10532465 intron spri - chrX 10532559 intron spri - chrX 10532653 intron spri - chrX_22_10530001 chrX_10530001 RAL-900_125b 3946 chrX 10550822 10550876 chrX 10552334 10552393 hobo 23 1513 3.5 9.0 6.2 3.2 1571 chrX 10550822 intron spri - chrX 10551608 intron spri - chrX 10552393 intron spri - chrX_23_10550001 chrX_10550001 RAL-900_125b 3947 chrX 10651599 10651632 chrX 10651765 10651798 11 164 0.0 13.5 6.8 1.4 199 chrX 10651599 intron X11Lbeta + chrX 10651698 intron X11Lbeta + chrX 10651798 intron X11Lbeta + chrX_11_10650001 chrX_10650001 RAL-900_125b 3948 chrX 10719073 10719143 chrX 10719218 10719255 8 135 0.0 6.0 3.0 2.0 182 chrX 10719073 intron CG32676 - chrX 10719164 intron CG32676 - chrX 10719255 intron CG32676 - chrX_8_10715001 chrX_10715001 RAL-900_125b 3949 chrX 10729025 10729059 chrX 10729180 10729214 10 155 7.0 8.5 7.8 1.1 189 chrX 10729025 intron CG32676 - chrX 10729120 intron CG32676 - chrX 10729214 intron CG32676 - chrX_10_10725001 chrX_10725001 RAL-900_125b 3950 chrX 10772633 10772649 chrX 10772766 10772782 7 132 14.0 7.5 10.8 0.6 149 chrX 10772633 intron CG15211 + chrX 10772708 intron CG15211 + chrX 10772782 intron CG15211 + chrX_7_10770001 chrX_10770001 RAL-900_125b 3951 chrX 10772650 10772698 chrX 10772762 10772831 Tirant 23 125 5.0 7.5 6.2 3.2 181 chrX 10772650 intron CG15211 + chrX 10772740 intron CG15211 + chrX 10772831 intron CG15211 + chrX_23_10770001 chrX_10770001 RAL-900_125b 3952 chrX 10803001 10803044 chrX 10803125 10803179 19 133 9.0 8.5 8.8 1.9 178 chrX 10803001 intron Imp - chrX 10803090 intron Imp - chrX 10803179 intron Imp - chrX_19_10800001 chrX_10800001 RAL-900_125b 3953 chrX 10876570 10876648 chrX 10876698 10876776 7 128 8.5 6.5 7.5 0.8 206 chrX 10876570 intron CG1637 - chrX 10876673 intron CG1637 - chrX 10876776 intron CG1637 - chrX_7_10875001 chrX_10875001 RAL-900_125b 3954 chrX 11026440 11026471 chrX 11026756 11026797 10 322 6.0 7.0 6.5 1.3 357 chrX 11026440 intron CG42339 - chrX 11026618 intron CG42339 - chrX 11026797 intron CG42339 - chrX_10_11025001 chrX_11025001 RAL-900_125b 3955 chrX 11034251 11034322 chrX 11034631 11034702 21 380 7.0 8.0 7.5 2.5 451 chrX 11034251 intron CG42339 - chrX 11034476 intron CG42339 - chrX 11034702 intron CG42339 - chrX_21_11030001 chrX_11030001 RAL-900_125b 3956 chrX 11095955 11096019 chrX 11103107 11103171 HMS-Beagle 19 7152 11.0 9.5 10.2 1.7 7216 chrX 11095955 intergenic not near genes chrX 11099563 intergenic not near genes chrX 11103171 intron CG42249 + chrX_19_11095001 chrX_11095001 RAL-900_125b 3957 chrX 11109417 11109417 chrX 12946233 12946234 5 1836817 31.5 34.5 33.0 0.1 1836817 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946234 3` UTR fne + chrX_5_12025001 chrX_12025001 RAL-900_125b 3958 chrX 11165828 11165901 chrX 11166210 11166283 13 382 5.5 9.5 7.5 1.5 455 chrX 11165828 intergenic not near genes chrX 11166056 intergenic not near genes chrX 11166283 intergenic not near genes chrX_13_11165001 chrX_11165001 RAL-900_125b 3959 chrX 11184207 11184273 chrX 11189333 11189399 flea 21 5125 8.0 12.5 10.2 1.9 5192 chrX 11184207 intergenic not near genes chrX 11186803 intergenic not near genes chrX 11189399 intergenic not near genes chrX_21_11185001 chrX_11185001 RAL-900_125b 3960 chrX 11312010 11312083 chrX 11319413 11319486 Stalker2 20 7401 6.0 5.5 5.8 2.9 7476 chrX 11312010 intergenic not near genes chrX 11315748 intergenic not near genes chrX 11319486 intergenic not near genes chrX_20_11315001 chrX_11315001 RAL-900_125b 3961 chrX 11355633 11355705 chrX 11355814 11355872 12 179 7.0 3.5 5.2 1.9 239 chrX 11355633 intergenic CG1737 +,dsh + chrX 11355752 intergenic dsh +,CG1737 + chrX 11355872 intergenic dsh +,CG1737 + chrX_12_11355001 chrX_11355001 RAL-900_125b 3962 chrX 11379717 11379783 chrX 11379911 11379978 28 194 5.0 9.0 7.0 3.5 261 chrX 11379717 intron dlg1 + chrX 11379848 intron dlg1 + chrX 11379978 intron dlg1 + chrX_28_11375001 chrX_11375001 RAL-900_125b 3963 chrX 11431608 11431615 chrX 11431745 11431752 5 137 0.0 13.0 6.5 0.7 144 chrX 11431608 3` UTR Evi5 - chrX 11431680 3` UTR Evi5 - chrX 11431752 3` UTR Evi5 - chrX_5_11430001 chrX_11430001 RAL-900_125b 3964 chrX 11535002 11535046 chrX 11541522 11541566 Burdock 19 6519 8.5 9.0 8.8 1.9 6564 chrX 11535002 intron Drak + chrX 11538284 intron Drak + chrX 11541566 intron Drak + chrX_19_11535001 chrX_11535001 RAL-900_125b 3965 chrX 11633374 11633441 chrX 11640478 11640545 297 14 7104 6.0 7.5 6.8 1.8 7171 chrX 11633374 intron Ptp10D + chrX 11636960 intron Ptp10D + chrX 11640545 intron Ptp10D + chrX_14_11635001 chrX_11635001 RAL-900_125b 3966 chrX 11645067 11645115 chrX 11648286 11648334 NOF 24 3217 12.5 6.5 9.5 2.3 3267 chrX 11645067 intron Ptp10D + chrX 11646700 intron Ptp10D + chrX 11648334 intron Ptp10D + chrX_24_11645001 chrX_11645001 RAL-900_125b 3967 chrX 11648943 11648965 chrX 11649067 11649086 9 129 15.5 7.5 11.5 0.7 143 chrX 11648943 intron Ptp10D + chrX 11649014 intron Ptp10D + chrX 11649086 intron Ptp10D + chrX_9_11645001 chrX_11645001 RAL-900_125b 3968 chrX 11761962 11762001 chrX 11762091 11762129 13 127 7.0 6.5 6.8 1.7 167 chrX 11761962 intron m + chrX 11762046 intron m + chrX 11762129 intron m + chrX_13_11760001 chrX_11760001 RAL-900_125b 3969 chrX 11804624 11804690 chrX 11804778 11804844 21 154 6.5 3.0 4.8 3.6 220 chrX 11804624 intron Hsc70-3 - chrX 11804734 intron Hsc70-3 - chrX 11804844 intron Hsc70-3 - chrX_21_11800001 chrX_11800001 RAL-900_125b 3970 chrX 11822168 11822209 chrX 11822357 11822398 6 187 10.5 18.0 14.2 0.4 230 chrX 11822168 intron rudhira + chrX 11822283 intron rudhira + chrX 11822398 intron rudhira + chrX_6_11820001 chrX_11820001 RAL-900_125b 3971 chrX 11922320 11922381 chrX 11922503 11922564 27 182 6.5 3.0 4.8 4.7 244 chrX 11922320 exon Sclp - chrX 11922442 intron Sclp - chrX 11922564 intron Sclp - chrX_27_11920001 chrX_11920001 RAL-900_125b 3972 chrX 11936556 11936570 chrX 11936694 11936719 6 146 0.0 8.5 4.2 1.2 163 chrX 11936556 intron cac - chrX 11936638 intron cac - chrX 11936719 exon cac - chrX_6_11935001 chrX_11935001 RAL-900_125b 3973 chrX 11936574 11936589 chrX 11936686 11936738 9 141 0.0 4.5 2.2 2.8 164 chrX 11936574 intron cac - chrX 11936656 intron cac - chrX 11936738 exon cac - chrX_9_11935001 chrX_11935001 RAL-900_125b 3974 chrX 12094013 12094057 chrX 12094155 12094199 12 139 6.0 9.0 7.5 1.4 186 chrX 12094013 intron,intron CR43960 +,Ten-a + chrX 12094106 intron,intron CR43960 +,Ten-a + chrX 12094199 intron,intron CR43960 +,Ten-a + chrX_12_12090001 chrX_12090001 RAL-900_125b 3975 chrX 12136416 12136497 chrX 12136547 12136623 10 129 2.5 9.0 5.8 1.5 207 chrX 12136416 intron Ten-a + chrX 12136520 intron Ten-a + chrX 12136623 intron Ten-a + chrX_10_12135001 chrX_12135001 RAL-900_125b 3976 chrX 12157314 12157372 chrX 12157618 12157676 20 303 9.0 3.5 6.2 2.8 362 chrX 12157314 intron Ten-a + chrX 12157495 intron Ten-a + chrX 12157676 intron Ten-a + chrX_20_12155001 chrX_12155001 RAL-900_125b 3977 chrX 12168095 12168142 chrX 12173587 12173626 I-element 15 5491 8.5 1.5 5.0 2.5 5531 chrX 12168095 intron Ten-a + chrX 12170860 intron Ten-a + chrX 12173626 intron Ten-a + chrX_15_12170001 chrX_12170001 RAL-900_125b 3978 chrX 12191551 12191585 chrX 12191689 12191723 13 138 5.0 11.0 8.0 1.4 172 chrX 12191551 intron Ten-a + chrX 12191637 intron Ten-a + chrX 12191723 intron Ten-a + chrX_13_12190001 chrX_12190001 RAL-900_125b 3979 chrX 12246946 12246959 chrX 12247084 12247097 8 138 11.0 4.0 7.5 0.9 151 chrX 12246946 intron Ten-a + chrX 12247022 intron Ten-a + chrX 12247097 intron Ten-a + chrX_8_12245001 chrX_12245001 RAL-900_125b 3980 chrX 12301917 12301946 chrX 12303263 12303277 X-element 13 1348 6.5 0.5 3.5 2.9 1360 chrX 12301917 intron Ten-a + chrX 12302597 intron Ten-a + chrX 12303277 intron Ten-a + chrX_13_12300001 chrX_12300001 RAL-900_125b 3981 chrX 12312540 12312563 chrX 12312666 12312689 8 125 11.5 7.5 9.5 0.8 149 chrX 12312540 intron Ten-a + chrX 12312614 intron Ten-a + chrX 12312689 intron Ten-a + chrX_8_12310001 chrX_12310001 RAL-900_125b 3982 chrX 12348142 12348188 chrX 12348275 12348321 18 130 7.5 7.5 7.5 2.1 179 chrX 12348142 intergenic not near genes chrX 12348232 intergenic not near genes chrX 12348321 intergenic not near genes chrX_18_12345001 chrX_12345001 RAL-900_125b 3983 chrX 12350727 12350780 chrX 12350858 12350881 10 127 6.5 0.0 3.2 2.4 154 chrX 12350727 intergenic not near genes chrX 12350804 intergenic not near genes chrX 12350881 intergenic not near genes chrX_10_12350001 chrX_12350001 RAL-900_125b 3984 chrX 12381808 12381895 chrX 12385771 12385821 flea 14 3960 0.0 10.5 5.2 2.3 4013 chrX 12381808 intergenic not near genes chrX 12383814 intergenic not near genes chrX 12385821 intergenic not near genes chrX_14_12380001 chrX_12380001 RAL-900_125b 3985 chrX 12414264 12414328 chrX 12414635 12414713 25 380 4.5 6.0 5.2 4.0 449 chrX 12414264 intergenic not near genes chrX 12414488 intergenic not near genes chrX 12414713 intergenic not near genes chrX_25_12410001 chrX_12410001 RAL-900_125b 3986 chrX 12455732 12455776 chrX 12455866 12455919 5 138 0.0 9.5 4.8 0.9 187 chrX 12455732 intergenic CR45615 +,CG15927 + chrX 12455826 5` UTR CR45615 + chrX 12455919 5` UTR CR45615 + chrX_5_12455001 chrX_12455001 RAL-900_125b 3987 chrX 12509859 12509926 chrX 12509986 12510053 27 127 5.5 9.5 7.5 3.2 194 chrX 12509859 intron CG2556 + chrX 12509956 intron CG2556 + chrX 12510053 intron CG2556 + chrX_27_12505001 chrX_12505001 RAL-900_125b 3988 chrX 12511276 12511350 chrX 12511407 12511449 17 130 0.0 6.0 3.0 4.2 173 chrX 12511276 intron CG2556 + chrX 12511362 intron CG2556 + chrX 12511449 intron CG2556 + chrX_17_12510001 chrX_12510001 RAL-900_125b 3989 chrX 12535932 12536002 chrX 12536061 12536136 7 130 0.0 6.5 3.2 1.7 204 chrX 12535932 intron CG43921 - chrX 12536034 intron CG43921 - chrX 12536136 intron CG43921 - chrX_7_12535001 chrX_12535001 RAL-900_125b 3990 chrX 12635405 12635422 chrX 12635540 12635557 4 135 8.5 14.0 11.2 0.3 152 chrX 12635405 intron Tomosyn + chrX 12635481 intron Tomosyn + chrX 12635557 intron Tomosyn + chrX_4_12635001 chrX_12635001 RAL-900_125b 3991 chrX 12705335 12705419 chrX 12705468 12705470 17 125 3.0 1.5 2.2 5.3 135 chrX 12705335 intron Smr - chrX 12705402 intron Smr - chrX 12705470 intron Smr - chrX_17_12705001 chrX_12705001 RAL-900_125b 3992 chrX 12917874 12917906 chrX 12918017 12918044 18 142 5.5 13.0 9.2 1.8 170 chrX 12917874 intron fne + chrX 12917959 intron fne + chrX 12918044 intron fne + chrX_18_12915001 chrX_12915001 RAL-900_125b 3993 chrX 12930557 12930601 chrX 12937723 12937767 HMS-Beagle 8 7166 9.0 9.0 9.0 0.8 7210 chrX 12930557 intron fne + chrX 12934162 intron fne + chrX 12937767 intron fne + chrX_8_12930001 chrX_12930001 RAL-900_125b 3994 chrX 11109417 11109417 chrX 12946233 12946233 4 1836816 31.5 34.5 33.0 0.1 1836816 chrX 11109417 intron Hsp60 + chrX 12027825 exon Usp7 - chrX 12946233 3` UTR fne + chrX_4_12025001 chrX_12025001 RAL-900_125b 3995 chrX 12960725 12960789 chrX 12960856 12960920 22 131 12.5 15.0 13.8 1.5 195 chrX 12960725 3` UTR CG32642 + chrX 12960822 intergenic CG32642 + chrX 12960920 intergenic CG32642 + chrX_22_12960001 chrX_12960001 RAL-900_125b 3996 chrX 12971642 12971687 chrX 12971768 12971814 20 123 5.0 9.0 7.0 2.5 172 chrX 12971642 intron,exon CR43636 -,CG15721 + chrX 12971728 intron,exon CR43636 -,CG15721 + chrX 12971814 intron,exon CR43636 -,CG15721 + chrX_20_12970001 chrX_12970001 RAL-900_125b 3997 chrX 12977039 12977061 chrX 12977165 12977187 12 126 5.5 19.0 12.2 0.9 148 chrX 12977039 intergenic not near genes chrX 12977113 intergenic not near genes chrX 12977187 intergenic not near genes chrX_12_12975001 chrX_12975001 RAL-900_125b 3998 chrX 13038786 13038866 chrX 13038920 13038987 21 128 2.5 4.5 3.5 4.7 201 chrX 13038786 intron rad + chrX 13038886 intron rad + chrX 13038987 intron rad + chrX_21_13035001 chrX_13035001 RAL-900_125b 3999 chrX 13073941 13073983 chrX 13074096 13074140 14 156 7.0 14.0 10.5 1.2 199 chrX 13073941 intron rad + chrX 13074040 intron rad + chrX 13074140 intron rad + chrX_14_13070001 chrX_13070001 RAL-900_125b 4000 chrX 13146564 13146629 chrX 13146702 13146767 32 138 4.0 11.5 7.8 3.6 203 chrX 13146564 intron CG32645 + chrX 13146666 intron CG32645 + chrX 13146767 intron CG32645 + chrX_32_13145001 chrX_13145001 RAL-900_125b 4001 chrX 13161663 13161712 chrX 13161780 13161839 14 126 4.0 6.0 5.0 2.3 176 chrX 13161663 3` UTR CG12096 + chrX 13161751 3` UTR,3` UTR CG12096 +,CG34411 - chrX 13161839 3` UTR,3` UTR CG12096 +,CG34411 - chrX_14_13160001 chrX_13160001 RAL-900_125b 4002 chrX 13236828 13236900 chrX 13236960 13237035 20 132 1.0 6.5 3.8 4.2 207 chrX 13236828 intron mew - chrX 13236932 intron mew - chrX 13237035 intron mew - chrX_20_13235001 chrX_13235001 RAL-900_125b 4003 chrX 13278123 13278174 chrX 13278256 13278307 15 131 10.0 8.0 9.0 1.5 184 chrX 13278123 intron HDAC4 - chrX 13278215 intron HDAC4 - chrX 13278307 intron HDAC4 - chrX_15_13275001 chrX_13275001 RAL-900_125b 4004 chrX 13347002 13347039 chrX 13347159 13347196 4 157 1.0 11.5 6.2 0.6 194 chrX 13347002 intergenic not near genes chrX 13347099 intergenic not near genes chrX 13347196 intergenic not near genes chrX_4_13345001 chrX_13345001 RAL-900_125b 4005 chrX 13401440 13401511 chrX 13401842 13401913 jockey 22 401 6.5 11.5 9.0 2.2 473 chrX 13401440 intergenic CG1673 +,CG12725 - chrX 13401676 intergenic CG12725 -,CG1673 + chrX 13401913 3` UTR CG12725 - chrX_22_13400001 chrX_13400001 RAL-900_125b 4006 chrX 13429414 13429493 chrX 13430613 13430659 jockey 8 1195 0.0 10.0 5.0 1.3 1245 chrX 13429414 intergenic not near genes chrX 13430036 intergenic not near genes chrX 13430659 intergenic not near genes chrX_8_13430001 chrX_13430001 RAL-900_125b 4007 chrX 13463599 13463666 chrX 13469226 13469293 mdg3 16 5627 8.0 9.0 8.5 1.7 5694 chrX 13463599 intron Neto + chrX 13466446 intron Neto + chrX 13469293 intron Neto + chrX_16_13465001 chrX_13465001 RAL-900_125b 4008 chrX 13603819 13603861 chrX 13603955 13603997 15 136 3.5 12.0 7.8 1.7 178 chrX 13603819 intergenic not near genes chrX 13603908 intergenic CR44654 + chrX 13603997 intergenic CR44654 + chrX_15_13600001 chrX_13600001 RAL-900_125b 4009 chrX 13700113 13700125 chrX 13700245 13700252 4 133 9.5 11.5 10.5 0.3 139 chrX 13700113 intron,intron CG9940 -,NnaD + chrX 13700182 intron,intron CG9940 -,NnaD + chrX 13700252 intron,intron CG9940 -,NnaD + chrX_4_13700001 chrX_13700001 RAL-900_125b 4010 chrX 13700127 13700139 chrX 13700243 13700265 6 132 7.5 11.5 9.5 0.6 138 chrX 13700127 intron,intron CG9940 -,NnaD + chrX 13700196 intron,intron CG9940 -,NnaD + chrX 13700265 intron,intron CG9940 -,NnaD + chrX_6_13700001 chrX_13700001 RAL-900_125b 4011 chrX 13821422 13821476 chrX 13821549 13821599 17 126 3.0 7.5 5.2 2.7 177 chrX 13821422 intron Clic - chrX 13821510 intron Clic - chrX 13821599 intron Clic - chrX_17_13820001 chrX_13820001 RAL-900_125b 4012 chrX 13875911 13875984 chrX 13876040 13876140 11 131 7.5 0.0 3.8 2.3 229 chrX 13875911 intron mamo - chrX 13876026 intron mamo - chrX 13876140 intron mamo - chrX_11_13875001 chrX_13875001 RAL-900_125b 4013 chrX 13880232 13880253 chrX 13880359 13880380 7 124 15.5 13.0 14.2 0.5 148 chrX 13880232 intron mamo - chrX 13880306 intron mamo - chrX 13880380 intron mamo - chrX_7_13880001 chrX_13880001 RAL-900_125b 4014 chrX 13935488 13935488 chrX 13935606 13935621 5 126 18.5 14.0 16.2 0.3 133 chrX 13935488 intron mamo - chrX 13935554 intron mamo - chrX 13935621 intron mamo - chrX_5_13935001 chrX_13935001 RAL-900_125b 4015 chrX 13935492 13935519 chrX 13935598 13935652 20 128 13.0 12.0 12.5 1.5 160 chrX 13935492 intron mamo - chrX 13935572 intron mamo - chrX 13935652 intron mamo - chrX_20_13935001 chrX_13935001 RAL-900_125b 4016 chrX 13937934 13937989 chrX 13941255 13941310 I-element 15 3321 6.5 9.0 7.8 1.7 3376 chrX 13937934 intron mamo - chrX 13939622 intron mamo - chrX 13941310 intron mamo - chrX_15_13935001 chrX_13935001 RAL-900_125b 4017 chrX 14023076 14023142 chrX 14023219 14023285 9 142 7.0 5.5 6.2 1.2 209 chrX 14023076 intergenic not near genes chrX 14023180 intergenic not near genes chrX 14023285 intergenic not near genes chrX_9_14020001 chrX_14020001 RAL-900_125b 4018 chrX 14030702 14030780 chrX 14035338 14035412 copia 5 4633 7.0 8.0 7.5 0.6 4710 chrX 14030702 intergenic not near genes chrX 14033057 intergenic not near genes chrX 14035412 intergenic not near genes chrX_5_14030001 chrX_14030001 RAL-900_125b 4019 chrX 14104982 14105005 chrX 14114183 14114200 roo 13 9200 15.5 5.5 10.5 1.1 9218 chrX 14104982 intergenic not near genes chrX 14109591 intergenic not near genes chrX 14114200 5` UTR CR44657 + chrX_13_14105001 chrX_14105001 RAL-900_125b 4020 chrX 14105008 14105050 chrX 14114182 14114235 roo 15 9197 9.0 5.5 7.2 1.8 9227 chrX 14105008 intergenic not near genes chrX 14109622 intergenic not near genes chrX 14114235 5` UTR CR44657 + chrX_15_14105001 chrX_14105001 RAL-900_125b 4021 chrX 14131431 14131441 chrX 14131569 14131579 4 138 8.0 5.5 6.8 0.5 148 chrX 14131431 intergenic not near genes chrX 14131505 intergenic not near genes chrX 14131579 intergenic not near genes chrX_4_14130001 chrX_14130001 RAL-900_125b 4022 chrX 14131444 14131516 chrX 14131567 14131647 19 125 3.0 5.5 4.2 3.7 203 chrX 14131444 intergenic not near genes chrX 14131546 intergenic not near genes chrX 14131647 intergenic not near genes chrX_19_14130001 chrX_14130001 RAL-900_125b 4023 chrX 14157557 14157617 chrX 14163264 14163324 297 9 5707 6.5 6.5 6.5 1.2 5767 chrX 14157557 intergenic not near genes chrX 14160440 intergenic not near genes chrX 14163324 intergenic not near genes chrX_9_14160001 chrX_14160001 RAL-900_125b 4024 chrX 14170019 14170049 chrX 14170476 14170503 10 454 12.0 58.5 35.2 0.3 484 chrX 14170019 exon CG12480 + chrX 14170261 exon CG12480 + chrX 14170503 exon CG12480 + chrX_10_14170001 chrX_14170001 RAL-900_125b 4025 chrX 14201073 14201145 chrX 14201204 14201268 43 131 3.0 4.0 3.5 9.6 195 chrX 14201073 intergenic CG11590 +,l(1)G0007 + chrX 14201170 intergenic l(1)G0007 +,CG11590 + chrX 14201268 intergenic l(1)G0007 +,CG11590 + chrX_43_14200001 chrX_14200001 RAL-900_125b 4026 chrX 14209418 14209490 chrX 14209559 14209631 25 139 3.5 8.0 5.8 3.7 213 chrX 14209418 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209524 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209631 intron,intron l(1)G0007 +,l(1)G0469 - chrX_25_14205001 chrX_14205001 RAL-900_125b 4027 chrX 14254322 14254387 chrX 14254439 14254520 25 129 5.5 4.0 4.8 4.3 198 chrX 14254322 intron mud + chrX 14254421 intron mud + chrX 14254520 intron mud + chrX_25_14250001 chrX_14250001 RAL-900_125b 4028 chrX 14304040 14304062 chrX 14310308 14310330 17.6 9 6268 12.5 6.0 9.2 0.9 6290 chrX 14304040 intergenic not near genes chrX 14307185 intergenic not near genes chrX 14310330 intergenic not near genes chrX_9_14305001 chrX_14305001 RAL-900_125b 4029 chrX 14401503 14401570 chrX 14401662 14401715 19 157 6.5 4.0 5.2 3.1 212 chrX 14401503 intron dpr8 + chrX 14401609 intron dpr8 + chrX 14401715 intron dpr8 + chrX_19_14400001 chrX_14400001 RAL-900_125b 4030 chrX 14404964 14405020 chrX 14405092 14405148 21 127 7.5 5.5 6.5 2.8 184 chrX 14404964 intron dpr8 + chrX 14405056 intron dpr8 + chrX 14405148 intron dpr8 + chrX_21_14405001 chrX_14405001 RAL-900_125b 4031 chrX 14411966 14411994 chrX 14412097 14412099 6 122 4.5 10.5 7.5 0.7 133 chrX 14411966 intron dpr8 + chrX 14412032 intron dpr8 + chrX 14412099 intron dpr8 + chrX_6_14410001 chrX_14410001 RAL-900_125b 4032 chrX 14416268 14416320 chrX 14421086 14421138 F-element 20 4818 6.0 9.0 7.5 2.4 4870 chrX 14416268 intron dpr8 + chrX 14418703 intron dpr8 + chrX 14421138 intron dpr8 + chrX_20_14415001 chrX_14415001 RAL-900_125b 4033 chrX 14426266 14426304 chrX 14426658 14426696 9 391 6.5 4.0 5.2 1.5 430 chrX 14426266 intron dpr8 + chrX 14426481 intron dpr8 + chrX 14426696 intron dpr8 + chrX_9_14425001 chrX_14425001 RAL-900_125b 4034 chrX 14484921 14484982 chrX 14485060 14485121 22 138 0.0 6.0 3.0 5.5 200 chrX 14484921 intergenic not near genes chrX 14485021 intergenic not near genes chrX 14485121 intergenic not near genes chrX_22_14485001 chrX_14485001 RAL-900_125b 4035 chrX 14593755 14593813 chrX 14593887 14593945 11 127 4.0 5.0 4.5 2.0 190 chrX 14593755 intron CG9413 - chrX 14593850 intron CG9413 - chrX 14593945 intron CG9413 - chrX_11_14590001 chrX_14590001 RAL-900_125b 4036 chrX 14636420 14636443 chrX 14641911 14641934 I-element 9 5491 16.0 11.0 13.5 0.6 5514 chrX 14636420 intron NetA - chrX 14639177 intron NetA - chrX 14641934 intron NetA - chrX_9_14635001 chrX_14635001 RAL-900_125b 4037 chrX 14636451 14636476 chrX 14641907 14641967 I-element 10 5479 10.5 11.0 10.8 0.8 5516 chrX 14636451 intron NetA - chrX 14639209 intron NetA - chrX 14641967 intron NetA - chrX_10_14635001 chrX_14635001 RAL-900_125b 4038 chrX 14713993 14714058 chrX 14714125 14714190 18 129 4.5 5.0 4.8 3.1 197 chrX 14713993 intron NetB - chrX 14714092 intron NetB - chrX 14714190 intron NetB - chrX_18_14710001 chrX_14710001 RAL-900_125b 4039 chrX 14777993 14778044 chrX 14782840 14782891 Doc 12 4847 9.5 10.0 9.8 1.1 4898 chrX 14777993 intergenic CG5347 + chrX 14780442 intergenic not near genes chrX 14782891 intergenic Ag5r2 - chrX_12_14780001 chrX_14780001 RAL-900_125b 4040 chrX 14810159 14810170 chrX 14810287 14810298 5 128 11.0 0.0 5.5 0.8 139 chrX 14810159 intron rut - chrX 14810228 intron rut - chrX 14810298 intron rut - chrX_5_14810001 chrX_14810001 RAL-900_125b 4041 chrX 14813686 14813765 chrX 14813814 14813893 18 127 5.5 5.5 5.5 2.8 207 chrX 14813686 intron rut - chrX 14813790 intron rut - chrX 14813893 intron rut - chrX_18_14810001 chrX_14810001 RAL-900_125b 4042 chrX 14818718 14818788 chrX 14823972 14824011 copia 23 5250 7.5 8.0 7.8 2.6 5293 chrX 14818718 intron rut - chrX 14821364 intron rut - chrX 14824011 intron rut - chrX_23_14820001 chrX_14820001 RAL-900_125b 4043 chrX 14883564 14883626 chrX 14883690 14883752 4 126 4.0 6.5 5.2 0.6 188 chrX 14883564 intron Flo2 + chrX 14883658 intron Flo2 + chrX 14883752 intron Flo2 + chrX_4_14880001 chrX_14880001 RAL-900_125b 4044 chrX 14888903 14888967 chrX 14889039 14889103 19 135 6.0 4.5 5.2 3.1 200 chrX 14888903 intron,intron Flo2 +,CG9514 - chrX 14889003 intron,intron Flo2 +,CG9514 - chrX 14889103 intron,intron Flo2 +,CG9514 - chrX_19_14885001 chrX_14885001 RAL-900_125b 4045 chrX 14936832 14936882 chrX 14946139 14946189 roo 26 9306 8.5 9.0 8.8 2.7 9357 chrX 14936832 intron pdgy - chrX 14941510 intron pdgy - chrX 14946189 intron pdgy - chrX_26_14940001 chrX_14940001 RAL-900_125b 4046 chrX 14950021 14950079 chrX 14950148 14950206 6 127 10.0 1.5 5.8 0.9 185 chrX 14950021 intron pdgy - chrX 14950114 intron pdgy - chrX 14950206 intron pdgy - chrX_6_14950001 chrX_14950001 RAL-900_125b 4047 chrX 14952388 14952463 chrX 14952606 14952676 18 217 7.0 9.5 8.2 2.0 288 chrX 14952388 intron,3` UTR pdgy -,CR44831 - chrX 14952532 intron,3` UTR pdgy -,CR44831 - chrX 14952676 intron,3` UTR pdgy -,CR44831 - chrX_18_14950001 chrX_14950001 RAL-900_125b 4048 chrX 14977417 14977454 chrX 14977529 14977575 7 140 3.5 5.5 4.5 1.3 158 chrX 14977417 intron eag + chrX 14977496 intron eag + chrX 14977575 intron eag + chrX_7_14975001 chrX_14975001 RAL-900_125b 4049 chrX 14981681 14981740 chrX 14981810 14981869 23 129 6.0 10.0 8.0 2.6 188 chrX 14981681 intron eag + chrX 14981775 intron eag + chrX 14981869 intron eag + chrX_23_14980001 chrX_14980001 RAL-900_125b 4050 chrX 15034060 15034086 chrX 15041643 15041669 rover 8 7583 10.5 13.5 12.0 0.6 7609 chrX 15034060 intron,3` UTR hiw -,be + chrX 15037864 intron,intron hiw -,be + chrX 15041669 intron,3` UTR hiw -,be + chrX_8_15035001 chrX_15035001 RAL-900_125b 4051 chrX 15059123 15059166 chrX 15059279 15059322 25 156 8.5 4.0 6.2 3.5 199 chrX 15059123 exon hiw - chrX 15059222 intron hiw - chrX 15059322 intron hiw - chrX_25_15055001 chrX_15055001 RAL-900_125b 4052 chrX 15127190 15127237 chrX 15127332 15127379 26 142 5.0 9.5 7.2 3.2 189 chrX 15127190 intron drd + chrX 15127284 intron drd + chrX 15127379 intron drd + chrX_26_15125001 chrX_15125001 RAL-900_125b 4053 chrX 15164996 15165012 chrX 15165125 15165141 5 129 6.0 6.0 6.0 0.7 145 chrX 15164996 intergenic not near genes chrX 15165068 intergenic not near genes chrX 15165141 intergenic not near genes chrX_5_15165001 chrX_15165001 RAL-900_125b 4054 chrX 15248221 15248263 chrX 15248347 15248389 10 126 12.5 9.0 10.8 0.8 168 chrX 15248221 intergenic not near genes chrX 15248305 intergenic not near genes chrX 15248389 intergenic not near genes chrX_10_15245001 chrX_15245001 RAL-900_125b 4055 chrX 15265842 15265862 chrX 15265964 15265989 6 122 13.5 6.0 9.8 0.6 147 chrX 15265842 intergenic not near genes chrX 15265916 intergenic not near genes chrX 15265989 intergenic not near genes chrX_6_15265001 chrX_15265001 RAL-900_125b 4056 chrX 15273680 15273722 chrX 15274875 15274899 1360 15 1207 6.5 5.0 5.8 2.2 1219 chrX 15273680 intergenic not near genes chrX 15274290 intergenic not near genes chrX 15274899 intergenic not near genes chrX_15_15270001 chrX_15270001 RAL-900_125b 4057 chrX 15287563 15287595 chrX 15287698 15287730 6 135 0.0 0.0 0.0 6.0 167 chrX 15287563 intergenic not near genes chrX 15287646 intergenic not near genes chrX 15287730 intergenic not near genes chrX_6_15285001 chrX_15285001 RAL-900_125b 4058 chrX 15326691 15326714 chrX 15326939 15326962 I-element 9 248 1.5 5.5 3.5 2.0 271 chrX 15326691 3` UTR Top1 + chrX 15326826 3` UTR Top1 + chrX 15326962 3` UTR Top1 + chrX_9_15325001 chrX_15325001 RAL-900_125b 4059 chrX 15369786 15369857 chrX 15369919 15369990 18 132 7.5 7.0 7.2 2.2 204 chrX 15369786 intron acj6 - chrX 15369888 intron acj6 - chrX 15369990 intron acj6 - chrX_18_15365001 chrX_15365001 RAL-900_125b 4060 chrX 15413012 15413072 chrX 15417364 15417424 Juan 16 4351 6.0 12.0 9.0 1.6 4412 chrX 15413012 intron Cngl - chrX 15415218 intron Cngl - chrX 15417424 intron Cngl - chrX_16_15415001 chrX_15415001 RAL-900_125b 4061 chrX 15421881 15421932 chrX 15423442 15423493 pogo 20 1561 10.5 9.5 10.0 1.8 1612 chrX 15421881 intron Cngl - chrX 15422687 intron Cngl - chrX 15423493 intron Cngl - chrX_20_15420001 chrX_15420001 RAL-900_125b 4062 chrX 15536624 15536695 chrX 15536783 15536854 30 155 7.5 10.0 8.8 3.1 230 chrX 15536624 intron Ac13E - chrX 15536739 intron Ac13E - chrX 15536854 intron Ac13E - chrX_30_15535001 chrX_15535001 RAL-900_125b 4063 chrX 15565585 15565662 chrX 15565721 15565798 32 136 7.5 8.5 8.0 3.6 213 chrX 15565585 intergenic not near genes chrX 15565692 intergenic not near genes chrX 15565798 intergenic not near genes chrX_32_15565001 chrX_15565001 RAL-900_125b 4064 chrX 15597016 15597087 chrX 15597185 15597256 13 169 1.5 0.0 0.8 7.2 240 chrX 15597016 intergenic not near genes chrX 15597136 intergenic not near genes chrX 15597256 intergenic not near genes chrX_13_15595001 chrX_15595001 RAL-900_125b 4065 chrX 15633967 15634031 chrX 15634394 15634458 16 425 4.5 6.0 5.2 2.6 491 chrX 15633967 intergenic not near genes chrX 15634212 intergenic not near genes chrX 15634458 intergenic not near genes chrX_16_15630001 chrX_15630001 RAL-900_125b 4066 chrX 15677997 15678063 chrX 15678124 15678190 28 125 6.0 9.5 7.8 3.2 193 chrX 15677997 intergenic CG12708 + chrX 15678094 intergenic CG12708 + chrX 15678190 intergenic CG12708 + chrX_28_15675001 chrX_15675001 RAL-900_125b 4067 chrX 15749604 15749682 chrX 15749761 15749834 24 155 5.5 5.0 5.2 3.9 230 chrX 15749604 intron CG8239 + chrX 15749719 intron CG8239 + chrX 15749834 exon CG8239 + chrX_24_15745001 chrX_15745001 RAL-900_125b 4068 chrX 8407457 8407466 chrX 15785702 15785711 6 7378245 9.0 37.0 23.0 0.2 7378254 chrX 8407457 intergenic CG11190 - chrX 12096584 intron,intron CR43960 +,Ten-a + chrX 15785711 intergenic Paf-AHalpha -,mRpS30 + chrX_6_12095001 chrX_12095001 RAL-900_125b 4069 chrX 15939219 15939298 chrX 15939354 15939433 16 135 8.5 7.5 8.0 1.8 214 chrX 15939219 5` UTR Stim - chrX 15939326 intron Stim - chrX 15939433 intron Stim - chrX_16_15935001 chrX_15935001 RAL-900_125b 4070 chrX 15953602 15953660 chrX 15953748 15953806 22 146 8.5 7.0 7.8 2.5 204 chrX 15953602 intron mmd - chrX 15953704 intron mmd - chrX 15953806 intron mmd - chrX_22_15950001 chrX_15950001 RAL-900_125b 4071 chrX 16160247 16160300 chrX 16160373 16160425 18 126 9.0 10.5 9.8 1.7 178 chrX 16160247 intergenic not near genes chrX 16160336 intergenic not near genes chrX 16160425 intergenic not near genes chrX_18_16160001 chrX_16160001 RAL-900_125b 4072 chrX 16222739 16222803 chrX 16231134 16231203 roo 25 8400 8.5 10.0 9.2 2.5 8464 chrX 16222739 intergenic not near genes chrX 16226971 intergenic not near genes chrX 16231203 intergenic not near genes chrX_25_16225001 chrX_16225001 RAL-900_125b 4073 chrX 16251723 16251737 chrX 16251852 16251866 8 127 11.5 14.0 12.8 0.6 143 chrX 16251723 intergenic not near genes chrX 16251794 intergenic not near genes chrX 16251866 intergenic not near genes chrX_8_16250001 chrX_16250001 RAL-900_125b 4074 chrX 16295487 16295555 chrX 16295621 16295683 14 130 4.5 0.0 2.2 4.4 196 chrX 16295487 intron CG9911 - chrX 16295585 intron CG9911 - chrX 16295683 intron CG9911 - chrX_14_16295001 chrX_16295001 RAL-900_125b 4075 chrX 16329356 16329446 chrX 16329503 16329536 8 132 0.0 3.0 1.5 3.2 180 chrX 16329356 exon CG9919 - chrX 16329446 intron CG9919 - chrX 16329536 exon CG9919 - chrX_8_16325001 chrX_16325001 RAL-900_125b 4076 chrX 16340627 16340682 chrX 16349834 16349889 roo 29 9206 7.5 4.5 6.0 4.1 9262 chrX 16340627 intergenic Dsp1 + chrX 16345258 intergenic not near genes chrX 16349889 intergenic sl + chrX_29_16345001 chrX_16345001 RAL-900_125b 4077 chrX 12917990 12917995 chrX 16457450 16457455 5 3539460 13.0 35.5 24.2 0.2 3539465 chrX 12917990 intron fne + chrX 14687722 3` UTR NetB - chrX 16457455 intergenic not near genes chrX_5_14685001 chrX_14685001 RAL-900_125b 4078 chrX 16492603 16492645 chrX 16498230 16498272 mdg3 21 5627 9.5 7.5 8.5 2.2 5669 chrX 16492603 intron para - chrX 16495438 intron para - chrX 16498272 exon para - chrX_21_16495001 chrX_16495001 RAL-900_125b 4079 chrX 16492650 16492668 chrX 16498222 16498270 mdg3 8 5617 7.0 6.0 6.5 1.1 5620 chrX 16492650 intron para - chrX 16495460 intron para - chrX 16498270 exon para - chrX_8_16495001 chrX_16495001 RAL-900_125b 4080 chrX 16529352 16529433 chrX 16529521 16529590 13 166 0.0 5.5 2.8 3.4 238 chrX 16529352 intron para - chrX 16529471 intron para - chrX 16529590 intron para - chrX_13_16525001 chrX_16525001 RAL-900_125b 4081 chrX 16552593 16552630 chrX 16552818 16552855 10 225 4.0 12.0 8.0 1.1 262 chrX 16552593 intron Arp2 - chrX 16552724 intron Arp2 - chrX 16552855 intron Arp2 - chrX_10_16550001 chrX_16550001 RAL-900_125b 4082 chrX 16569664 16569688 chrX 16569795 16569819 13 131 14.0 15.5 14.8 0.8 155 chrX 16569664 intron CanA-14F - chrX 16569742 intron CanA-14F - chrX 16569819 intron CanA-14F - chrX_13_16565001 chrX_16565001 RAL-900_125b 4083 chrX 16586199 16586272 chrX 16586330 16586402 22 130 6.0 10.0 8.0 2.4 203 chrX 16586199 intron CanA-14F - chrX 16586300 5` UTR CanA-14F - chrX 16586402 5` UTR CanA-14F - chrX_22_16585001 chrX_16585001 RAL-900_125b 4084 chrX 16622242 16622289 chrX 16622369 16622417 18 128 6.5 8.0 7.2 2.2 175 chrX 16622242 intergenic not near genes chrX 16622330 intergenic not near genes chrX 16622417 intergenic not near genes chrX_18_16620001 chrX_16620001 RAL-900_125b 4085 chrX 16650886 16650958 chrX 16651010 16651087 10 124 10.5 7.5 9.0 1.0 201 chrX 16650886 intergenic CG32573 +,CG42512 + chrX 16650986 intergenic CG32573 +,CG42512 + chrX 16651087 intergenic CG32573 +,CG42512 + chrX_10_16650001 chrX_16650001 RAL-900_125b 4086 chrX 16689583 16689649 chrX 16689719 16689785 22 133 7.0 5.5 6.2 3.1 202 chrX 16689583 intron Sep4 - chrX 16689684 intron Sep4 - chrX 16689785 intron Sep4 - chrX_22_16685001 chrX_16685001 RAL-900_125b 4087 chrX 16690092 16690113 chrX 16690227 16690242 6 134 6.5 6.0 6.2 0.8 150 chrX 16690092 intron Sep4 - chrX 16690167 intron Sep4 - chrX 16690242 intron Sep4 - chrX_6_16690001 chrX_16690001 RAL-900_125b 4088 chrX 16690401 16690478 chrX 16690530 16690607 21 125 5.0 4.5 4.8 3.6 206 chrX 16690401 intron Sep4 - chrX 16690504 intron Sep4 - chrX 16690607 intron Sep4 - chrX_21_16690001 chrX_16690001 RAL-900_125b 4089 chrX 16707961 16707976 chrX 16708145 16708160 5 184 0.0 9.5 4.8 0.9 199 chrX 16707961 intron CG4678 + chrX 16708060 intron CG4678 + chrX 16708160 exon CG4678 + chrX_5_16705001 chrX_16705001 RAL-900_125b 4090 chrX 16764694 16764703 chrX 16764821 16764830 5 127 15.0 0.5 7.8 0.6 136 chrX 16764694 intron if - chrX 16764762 intron if - chrX 16764830 intron if - chrX_5_16760001 chrX_16760001 RAL-900_125b 4091 chrX 16785230 16785298 chrX 16785384 16785452 20 154 6.0 5.0 5.5 3.1 222 chrX 16785230 3` UTR CG9609 - chrX 16785341 3` UTR CG9609 - chrX 16785452 3` UTR CG9609 - chrX_20_16785001 chrX_16785001 RAL-900_125b 4092 chrX 16821190 16821258 chrX 16821320 16821388 11 130 5.0 0.0 2.5 3.1 198 chrX 16821190 intron CG4829 + chrX 16821289 intron CG4829 + chrX 16821388 intron CG4829 + chrX_11_16820001 chrX_16820001 RAL-900_125b 4093 chrX 16869647 16869676 chrX 16869780 16869809 10 130 11.0 14.5 12.8 0.7 162 chrX 16869647 intron CG13003 - chrX 16869728 intron CG13003 - chrX 16869809 intron CG13003 - chrX_10_16865001 chrX_16865001 RAL-900_125b 4094 chrX 16870029 16870088 chrX 16870161 16870221 18 132 8.5 10.5 9.5 1.7 192 chrX 16870029 intron CG13003 - chrX 16870125 intron CG13003 - chrX 16870221 intron CG13003 - chrX_18_16870001 chrX_16870001 RAL-900_125b 4095 chrX 16935951 16936024 chrX 16936419 16936492 jockey 16 465 5.5 4.5 5.0 2.7 541 chrX 16935951 intron CG4928 + chrX 16936222 intron CG4928 + chrX 16936492 intron CG4928 + chrX_16_16935001 chrX_16935001 RAL-900_125b 4096 chrX 1053117 1053119 chrX 16983076 16983076 4 15929958 30.0 30.5 30.2 0.1 15929959 chrX 1053117 intron CR44779 + chrX 9018096 intron,intron rdgA +,CR43836 - chrX 16983076 intron CG45002 - chrX_4_9015001 chrX_9015001 RAL-900_125b 4097 chrX 16984607 16984671 chrX 16985033 16985097 19 425 6.0 6.5 6.2 2.6 490 chrX 16984607 intron CG45002 - chrX 16984852 intron CG45002 - chrX 16985097 intron CG45002 - chrX_19_16980001 chrX_16980001 RAL-900_125b 4098 chrX 17007007 17007028 chrX 17007136 17007157 8 127 0.0 1.0 0.5 5.3 150 chrX 17007007 intron CG45002 - chrX 17007082 intron CG45002 - chrX 17007157 intron CG45002 - chrX_8_17005001 chrX_17005001 RAL-900_125b 4099 chrX 17011937 17011985 chrX 17012056 17012118 21 125 8.0 6.5 7.2 2.6 181 chrX 17011937 intron CG45002 - chrX 17012028 intron CG45002 - chrX 17012118 intron CG45002 - chrX_21_17010001 chrX_17010001 RAL-900_125b 4100 chrX 17014464 17014487 chrX 17014590 17014613 9 125 4.5 13.0 8.8 0.9 149 chrX 17014464 intron CG45002 - chrX 17014538 intron CG45002 - chrX 17014613 intron CG45002 - chrX_9_17010001 chrX_17010001 RAL-900_125b 4101 chrX 17057895 17057958 chrX 17058186 17058249 pogo 17 291 8.5 7.0 7.8 1.9 354 chrX 17057895 intron CG45002 - chrX 17058072 intron CG45002 - chrX 17058249 intron CG45002 - chrX_17_17055001 chrX_17055001 RAL-900_125b 4102 chrX 17061522 17061585 chrX 17061695 17061758 22 173 6.5 6.0 6.2 3.1 236 chrX 17061522 intron CG45002 - chrX 17061640 intron CG45002 - chrX 17061758 intron CG45002 - chrX_22_17060001 chrX_17060001 RAL-900_125b 4103 chrX 17110075 17110329 chrX 17110203 17110498 13 163 0.0 0.0 0.0 13.0 423 chrX 17110075 intron CG5004 + chrX 17110286 intron CG5004 + chrX 17110498 intron CG5004 + chrX_13_17110001 chrX_17110001 RAL-900_125b 4104 chrX 17195166 17195227 chrX 17200302 17200360 flea 26 5135 9.5 12.0 10.8 2.2 5194 chrX 17195166 3` UTR baz + chrX 17197763 3` UTR baz + chrX 17200360 3` UTR baz + chrX_26_17195001 chrX_17195001 RAL-900_125b 4105 chrX 17205798 17205857 chrX 17205938 17205997 26 139 6.5 10.5 8.5 2.7 199 chrX 17205798 intergenic not near genes chrX 17205898 intergenic not near genes chrX 17205997 intergenic CG32564 + chrX_26_17205001 chrX_17205001 RAL-900_125b 4106 chrX 17221792 17221850 chrX 17221928 17221986 15 135 7.0 9.5 8.2 1.6 194 chrX 17221792 intron CG5172 + chrX 17221889 intron CG5172 + chrX 17221986 intron CG5172 + chrX_15_17220001 chrX_17220001 RAL-900_125b 4107 chrX 17237491 17237535 chrX 17237625 17237669 12 134 5.5 9.5 7.5 1.4 178 chrX 17237491 intron f + chrX 17237580 intron f + chrX 17237669 intron f + chrX_12_17235001 chrX_17235001 RAL-900_125b 4108 chrX 17282828 17282890 chrX 17282956 17282978 11 119 10.5 1.0 5.8 1.6 150 chrX 17282828 5` UTR CG5445 + chrX 17282903 5` UTR CG5445 + chrX 17282978 intron CG5445 + chrX_11_17280001 chrX_17280001 RAL-900_125b 4109 chrX 17316330 17316355 chrX 17316464 17316489 7 134 13.0 0.0 6.5 0.9 159 chrX 17316330 intron B-H2 + chrX 17316410 intron B-H2 + chrX 17316489 intron B-H2 + chrX_7_17315001 chrX_17315001 RAL-900_125b 4110 chrX 17352546 17352616 chrX 17352690 17352764 30 146 0.0 10.0 5.0 5.0 218 chrX 17352546 intergenic not near genes chrX 17352655 intergenic not near genes chrX 17352764 intergenic not near genes chrX_30_17350001 chrX_17350001 RAL-900_125b 4111 chrX 17357500 17357526 chrX 17357644 17357670 4 144 5.0 0.0 2.5 1.1 170 chrX 17357500 intergenic not near genes chrX 17357585 intergenic not near genes chrX 17357670 intergenic not near genes chrX_4_17355001 chrX_17355001 RAL-900_125b 4112 chrX 17362471 17362484 chrX 17362613 17362626 7 142 13.5 8.5 11.0 0.6 155 chrX 17362471 intergenic not near genes chrX 17362548 intergenic not near genes chrX 17362626 intergenic not near genes chrX_7_17360001 chrX_17360001 RAL-900_125b 4113 chrX 17426997 17427073 chrX 17427134 17427210 20 136 6.5 2.5 4.5 3.6 213 chrX 17426997 intron,intron CG12994 -,CG5613 + chrX 17427104 intron,intron CG12994 -,CG5613 + chrX 17427210 intron,intron CG12994 -,CG5613 + chrX_20_17425001 chrX_17425001 RAL-900_125b 4114 chrX 17431313 17431341 chrX 17431704 17431732 jockey 9 391 14.0 9.0 11.5 0.7 419 chrX 17431313 intron CG12994 - chrX 17431522 intron CG12994 - chrX 17431732 intron CG12994 - chrX_9_17430001 chrX_17430001 RAL-900_125b 4115 chrX 17443072 17443095 chrX 17443246 17443269 8 174 7.5 2.0 4.8 1.4 197 chrX 17443072 intron CG12994 - chrX 17443170 intron CG12994 - chrX 17443269 intron CG12994 - chrX_8_17440001 chrX_17440001 RAL-900_125b 4116 chrX 8822511 8822515 chrX 17447062 17447066 4 8624551 18.5 26.0 22.2 0.2 8624555 chrX 8822511 intergenic not near genes chrX 13134788 intergenic CG15717 +,MFS10 + chrX 17447066 intron p-cup - chrX_4_13130001 chrX_13130001 RAL-900_125b 4117 chrX 17479898 17479907 chrX 17480025 17480030 5 125 14.5 9.5 12.0 0.4 132 chrX 17479898 intron CG43658 - chrX 17479964 intron CG43658 - chrX 17480030 intron CG43658 - chrX_5_17475001 chrX_17475001 RAL-900_125b 4118 chrX 17479910 17479933 chrX 17480013 17480060 7 111 10.5 8.5 9.5 0.7 150 chrX 17479910 intron CG43658 - chrX 17479985 intron CG43658 - chrX 17480060 intron CG43658 - chrX_7_17475001 chrX_17475001 RAL-900_125b 4119 chrX 17536813 17536868 chrX 17536947 17537001 17 133 4.5 17.5 11.0 1.4 188 chrX 17536813 intron CG43658 - chrX 17536907 intron CG43658 - chrX 17537001 intron CG43658 - chrX_17_17535001 chrX_17535001 RAL-900_125b 4120 chrX 17544963 17545032 chrX 17545095 17545164 23 132 7.0 7.5 7.2 2.8 201 chrX 17544963 intron CG43658 - chrX 17545064 intron CG43658 - chrX 17545164 intron CG43658 - chrX_23_17545001 chrX_17545001 RAL-900_125b 4121 chrX 17546923 17546991 chrX 17547106 17547174 20 183 0.0 6.0 3.0 5.0 251 chrX 17546923 intron CG43658 - chrX 17547048 intron CG43658 - chrX 17547174 intron CG43658 - chrX_20_17545001 chrX_17545001 RAL-900_125b 4122 chrX 17657058 17657120 chrX 17657188 17657250 34 130 2.5 6.0 4.2 6.5 192 chrX 17657058 intergenic IntS2 -,beta-Spec + chrX 17657154 intergenic beta-Spec +,IntS2 - chrX 17657250 intergenic beta-Spec +,IntS2 - chrX_34_17655001 chrX_17655001 RAL-900_125b 4123 chrX 17680875 17680883 chrX 17681002 17681009 4 126 14.5 12.5 13.5 0.3 134 chrX 17680875 intron chas - chrX 17680942 intron chas - chrX 17681009 intron chas - chrX_4_17680001 chrX_17680001 RAL-900_125b 4124 chrX 17680888 17680917 chrX 17680972 17681044 11 110 9.0 6.5 7.8 1.2 156 chrX 17680888 intron chas - chrX 17680966 intron chas - chrX 17681044 intron chas - chrX_11_17680001 chrX_17680001 RAL-900_125b 4125 chrX 17708781 17708850 chrX 17708908 17708978 17 128 5.5 5.0 5.2 2.7 197 chrX 17708781 intron CG8173 - chrX 17708880 intron CG8173 - chrX 17708978 intron CG8173 - chrX_17_17705001 chrX_17705001 RAL-900_125b 4126 chrX 17716548 17716600 chrX 17716683 17716737 14 135 6.5 9.5 8.0 1.6 189 chrX 17716548 intron CG42684 + chrX 17716642 intron CG42684 + chrX 17716737 intron CG42684 + chrX_14_17715001 chrX_17715001 RAL-900_125b 4127 chrX 17726403 17726465 chrX 17726534 17726569 18 119 6.0 8.5 7.2 2.2 166 chrX 17726403 intron CG42684 + chrX 17726486 intron CG42684 + chrX 17726569 intron CG42684 + chrX_18_17725001 chrX_17725001 RAL-900_125b 4128 chrX 17727494 17727508 chrX 17727632 17727635 5 136 12.0 3.0 7.5 0.6 141 chrX 17727494 intron CG42684 + chrX 17727564 intron CG42684 + chrX 17727635 intron CG42684 + chrX_5_17725001 chrX_17725001 RAL-900_125b 4129 chrX 17741287 17741359 chrX 17741483 17741555 17 196 0.5 5.0 2.8 4.5 268 chrX 17741287 intron CG42684 + chrX 17741421 intron CG42684 + chrX 17741555 intron CG42684 + chrX_17_17740001 chrX_17740001 RAL-900_125b 4130 chrX 17784430 17784481 chrX 17784556 17784607 18 126 1.0 11.5 6.2 2.5 177 chrX 17784430 intergenic not near genes chrX 17784518 intergenic not near genes chrX 17784607 intergenic not near genes chrX_18_17780001 chrX_17780001 RAL-900_125b 4131 chrX 17792936 17792969 chrX 17796253 17796317 flea 13 3337 8.5 5.5 7.0 1.6 3381 chrX 17792936 intron OdsH + chrX 17794626 intron OdsH + chrX 17796317 intron OdsH + chrX_13_17790001 chrX_17790001 RAL-900_125b 4132 chrX 17812343 17812378 chrX 17812470 17812483 6 123 10.0 13.0 11.5 0.5 140 chrX 17812343 intron OdsH + chrX 17812413 intron OdsH + chrX 17812483 intron OdsH + chrX_6_17810001 chrX_17810001 RAL-900_125b 4133 chrX 17911810 17911864 chrX 17911945 17912001 14 137 6.0 6.0 6.0 2.0 191 chrX 17911810 intron CG6847 + chrX 17911906 intron CG6847 + chrX 17912001 intron CG6847 + chrX_14_17910001 chrX_17910001 RAL-900_125b 4134 chrX 17968861 17968916 chrX 17969030 17969084 23 168 4.5 9.5 7.0 2.9 223 chrX 17968861 intron Sh - chrX 17968972 intron Sh - chrX 17969084 intron Sh - chrX_23_17965001 chrX_17965001 RAL-900_125b 4135 chrX 17972728 17972749 chrX 17972871 17972892 5 143 11.0 0.0 5.5 0.8 164 chrX 17972728 intron Sh - chrX 17972810 intron Sh - chrX 17972892 intron Sh - chrX_5_17970001 chrX_17970001 RAL-900_125b 4136 chrX 18126552 18126836 chrX 18126725 18126963 39 150 5.0 4.5 4.8 6.7 411 chrX 18126552 intron CG32553 - chrX 18126758 intron CG32553 - chrX 18126963 5` UTR CG32553 - chrX_39_18125001 chrX_18125001 RAL-900_125b 4137 chrX 18148589 18148619 chrX 18148742 18148772 10 153 3.5 6.5 5.0 1.7 183 chrX 18148589 intergenic not near genes chrX 18148680 intergenic not near genes chrX 18148772 intergenic not near genes chrX_10_18145001 chrX_18145001 RAL-900_125b 4138 chrX 18194024 18194097 chrX 18194609 18194625 BS 35 583 11.5 11.5 11.5 2.8 601 chrX 18194024 intron Frq2 + chrX 18194324 intron Frq2 + chrX 18194625 intron Frq2 + chrX_35_18190001 chrX_18190001 RAL-900_125b 4139 chrX 18320428 18320498 chrX 18320622 18320680 15 188 0.0 7.0 3.5 3.3 252 chrX 18320428 intron CG6023 - chrX 18320554 intron CG6023 - chrX 18320680 intron CG6023 - chrX_15_18320001 chrX_18320001 RAL-900_125b 4140 chrX 18362933 18362946 chrX 18363060 18363073 7 127 0.0 4.0 2.0 2.3 140 chrX 18362933 intergenic CG6106 + chrX 18363003 intergenic CG6106 + chrX 18363073 intergenic not near genes chrX_7_18360001 chrX_18360001 RAL-900_125b 4141 chrX 18429454 18429512 chrX 18434815 18434873 Transpac 27 5360 9.0 9.5 9.2 2.6 5419 chrX 18429454 intergenic not near genes chrX 18432164 intergenic not near genes chrX 18434873 intergenic not near genes chrX_27_18430001 chrX_18430001 RAL-900_125b 4142 chrX 18474809 18474884 chrX 18474936 18474986 29 125 6.0 6.0 6.0 4.1 177 chrX 18474809 intron CG32547 - chrX 18474898 intron CG32547 - chrX 18474986 intron CG32547 - chrX_29_18470001 chrX_18470001 RAL-900_125b 4143 chrX 18479850 18479859 chrX 18479986 18479995 4 136 4.5 8.0 6.2 0.6 145 chrX 18479850 intergenic Hayan -,CR45714 +,CG32547 - chrX 18479922 intergenic Hayan -,CR45714 +,CG32547 - chrX 18479995 3` UTR Hayan - chrX_4_18475001 chrX_18475001 RAL-900_125b 4144 chrX 18490001 18490057 chrX 18490201 18490260 18 198 8.0 2.0 5.0 3.0 259 chrX 18490001 intergenic CG15046 - chrX 18490130 intergenic not near genes chrX 18490260 intergenic not near genes chrX_18_18490001 chrX_18490001 RAL-900_125b 4145 chrX 18532369 18532431 chrX 18532506 18532568 25 135 9.5 7.5 8.5 2.6 199 chrX 18532369 intron Bx + chrX 18532468 intron Bx + chrX 18532568 intron Bx + chrX_25_18530001 chrX_18530001 RAL-900_125b 4146 chrX 18543058 18543117 chrX 18543191 18543250 17 131 10.5 6.5 8.5 1.8 192 chrX 18543058 intron Bx + chrX 18543154 intron Bx + chrX 18543250 intron Bx + chrX_17_18540001 chrX_18540001 RAL-900_125b 4147 chrX 18558761 18558804 chrX 18558893 18558936 13 132 2.0 10.5 6.2 1.8 175 chrX 18558761 intron Bx + chrX 18558848 intron Bx + chrX 18558936 intron Bx + chrX_13_18555001 chrX_18555001 RAL-900_125b 4148 chrX 12946235 12946235 chrX 18572525 18572525 7 5626290 32.0 38.5 35.2 0.2 5626290 chrX 12946235 3` UTR fne + chrX 15759380 intron Graf - chrX 18572525 intergenic not near genes chrX_7_15755001 chrX_15755001 RAL-900_125b 4149 chrX 18644974 18645042 chrX 18645122 18645170 28 146 7.0 6.0 6.5 3.7 196 chrX 18644974 intron Rip11 - chrX 18645072 intron Rip11 - chrX 18645170 intron Rip11 - chrX_28_18645001 chrX_18645001 RAL-900_125b 4150 chrX 18688210 18688272 chrX 18688383 18688445 25 173 7.5 9.0 8.2 2.7 235 chrX 18688210 3` UTR phm + chrX 18688328 3` UTR phm + chrX 18688445 intergenic phm +,Cyp18a1 - chrX_25_18685001 chrX_18685001 RAL-900_125b 4151 chrX 18698800 18698877 chrX 18698967 18699044 23 166 4.5 6.5 5.5 3.5 244 chrX 18698800 intergenic not near genes chrX 18698922 intergenic not near genes chrX 18699044 intergenic not near genes chrX_23_18695001 chrX_18695001 RAL-900_125b 4152 chrX 18754296 18754343 chrX 18758013 18758058 297 14 3711 11.0 10.0 10.5 1.2 3762 chrX 18754296 intergenic not near genes chrX 18756177 intergenic not near genes chrX 18758058 intergenic not near genes chrX_14_18755001 chrX_18755001 RAL-900_125b 4153 chrX 18910910 18910983 chrX 18911047 18911120 33 136 5.5 7.5 6.5 4.4 210 chrX 18910910 3` UTR CG7378 + chrX 18911015 3` UTR CG7378 + chrX 18911120 3` UTR CG7378 + chrX_33_18910001 chrX_18910001 RAL-900_125b 4154 chrX 18926490 18926527 chrX 18926632 18926644 7 138 6.0 0.0 3.0 1.8 154 chrX 18926490 intergenic not near genes chrX 18926567 intergenic not near genes chrX 18926644 intergenic not near genes chrX_7_18925001 chrX_18925001 RAL-900_125b 4155 chrX 18940609 18940619 chrX 18941208 18941213 4 597 8.0 4.5 6.2 0.6 604 chrX 18940609 intron CG43759 + chrX 18940911 intron CG43759 + chrX 18941213 intron CG43759 + chrX_4_18940001 chrX_18940001 RAL-900_125b 4156 chrX 18957035 18957041 chrX 18965746 18965752 roo 7 8710 9.5 5.5 7.5 0.8 8717 chrX 18957035 intron CG43759 + chrX 18961394 intron CG43759 + chrX 18965752 intron CG43759 + chrX_7_18960001 chrX_18960001 RAL-900_125b 4157 chrX 18957043 18957095 chrX 18965733 18965806 roo 20 8710 7.0 4.0 5.5 3.1 8763 chrX 18957043 intron CG43759 + chrX 18961424 intron CG43759 + chrX 18965806 intron CG43759 + chrX_20_18960001 chrX_18960001 RAL-900_125b 4158 chrX 19025238 19025302 chrX 19025373 19025437 23 134 8.5 7.5 8.0 2.6 199 chrX 19025238 intron CG43759 + chrX 19025338 intron CG43759 + chrX 19025437 intron CG43759 + chrX_23_19025001 chrX_19025001 RAL-900_125b 4159 chrX 19060366 19060431 chrX 19065200 19065265 Doc 27 4833 9.5 10.5 10.0 2.5 4899 chrX 19060366 intron CG14190 + chrX 19062816 intron CG14190 + chrX 19065265 intron CG14190 + chrX_27_19060001 chrX_19060001 RAL-900_125b 4160 chrX 19073634 19073698 chrX 19073771 19073835 22 137 8.5 6.5 7.5 2.6 201 chrX 19073634 intergenic not near genes chrX 19073734 intergenic not near genes chrX 19073835 intergenic not near genes chrX_22_19070001 chrX_19070001 RAL-900_125b 4161 chrX 19080281 19080348 chrX 19080437 19080504 22 156 7.5 7.5 7.5 2.6 223 chrX 19080281 intergenic not near genes chrX 19080392 intergenic not near genes chrX 19080504 intergenic not near genes chrX_22_19080001 chrX_19080001 RAL-900_125b 4162 chrX 19084044 19084104 chrX 19084214 19084274 12 168 6.5 0.0 3.2 2.9 230 chrX 19084044 intergenic CR45503 + chrX 19084159 intergenic CR45503 + chrX 19084274 intergenic CR45503 + chrX_12_19080001 chrX_19080001 RAL-900_125b 4163 chrX 19089941 19089995 chrX 19090081 19090135 17 140 7.0 5.0 6.0 2.4 194 chrX 19089941 intergenic not near genes chrX 19090038 intergenic not near genes chrX 19090135 intergenic not near genes chrX_17_19090001 chrX_19090001 RAL-900_125b 4164 chrX 19098708 19098754 chrX 19098835 19098881 15 127 0.0 6.5 3.2 3.6 173 chrX 19098708 intergenic not near genes chrX 19098794 intergenic not near genes chrX 19098881 intergenic not near genes chrX_15_19095001 chrX_19095001 RAL-900_125b 4165 chrX 19119650 19119714 chrX 19119786 19119846 15 135 6.5 0.0 3.2 3.6 196 chrX 19119650 intergenic not near genes chrX 19119748 intergenic not near genes chrX 19119846 intergenic not near genes chrX_15_19115001 chrX_19115001 RAL-900_125b 4166 chrX 19125642 19125718 chrX 19125821 19125897 32 178 6.0 9.5 7.8 3.6 255 chrX 19125642 exon tgy - chrX 19125770 intron tgy - chrX 19125897 intron tgy - chrX_32_19125001 chrX_19125001 RAL-900_125b 4167 chrX 19131921 19131996 chrX 19132053 19132093 20 130 5.0 8.0 6.5 2.7 172 chrX 19131921 intergenic not near genes chrX 19132007 intergenic not near genes chrX 19132093 intergenic not near genes chrX_20_19130001 chrX_19130001 RAL-900_125b 4168 chrX 19136504 19136559 chrX 19143474 19143507 412 17 6968 12.5 1.0 6.8 2.2 7003 chrX 19136504 intergenic not near genes chrX 19140006 intergenic not near genes chrX 19143507 3` UTR RhoGAP18B - chrX_17_19140001 chrX_19140001 RAL-900_125b 4169 chrX 19176182 19176236 chrX 19176301 19176370 21 133 8.0 9.5 8.8 2.1 188 chrX 19176182 3` UTR CG7556 - chrX 19176276 3` UTR CG7556 - chrX 19176370 3` UTR CG7556 - chrX_21_19175001 chrX_19175001 RAL-900_125b 4170 chrX 19181975 19182044 chrX 19182139 19182206 16 162 2.0 0.0 1.0 8.0 231 chrX 19181975 3` UTR CG7453 + chrX 19182090 intergenic CG7453 + chrX 19182206 intergenic CG7453 + chrX_16_19180001 chrX_19180001 RAL-900_125b 4171 chrX 19185500 19185564 chrX 19185646 19185710 11 146 0.0 6.5 3.2 2.6 210 chrX 19185500 intron CG33253 + chrX 19185605 intron CG33253 + chrX 19185710 exon CG33253 + chrX_11_19185001 chrX_19185001 RAL-900_125b 4172 chrX 19356950 19357020 chrX 19358441 19358529 NOF 20 1501 5.0 0.0 2.5 5.7 1579 chrX 19356950 intron kek5 + chrX 19357740 intron kek5 + chrX 19358529 intron kek5 + chrX_20_19355001 chrX_19355001 RAL-900_125b 4173 chrX 19380114 19380177 chrX 19380405 19380468 pogo 21 291 9.5 6.0 7.8 2.4 354 chrX 19380114 intron kek5 + chrX 19380291 intron kek5 + chrX 19380468 intron kek5 + chrX_21_19380001 chrX_19380001 RAL-900_125b 4174 chrX 16983076 16983077 chrX 19404963 19404965 7 2421888 33.5 17.0 25.2 0.3 2421889 chrX 16983076 intron CG45002 - chrX 18194020 intron Frq2 + chrX 19404965 intron kek5 + chrX_7_18190001 chrX_18190001 RAL-900_125b 4175 chrX 19461095 19461160 chrX 19461241 19461306 14 145 5.5 8.0 6.8 1.8 211 chrX 19461095 intron kek5 + chrX 19461200 intron kek5 + chrX 19461306 intron kek5 + chrX_14_19460001 chrX_19460001 RAL-900_125b 4176 chrX 19467629 19467689 chrX 19467982 19468040 19 351 10.0 5.0 7.5 2.2 411 chrX 19467629 intron kek5 + chrX 19467834 intron kek5 + chrX 19468040 intron kek5 + chrX_19_19465001 chrX_19465001 RAL-900_125b 4177 chrX 19472083 19472099 chrX 19472703 19472719 jockey 8 620 11.5 5.5 8.5 0.8 636 chrX 19472083 intergenic kek5 + chrX 19472401 intergenic kek5 + chrX 19472719 intergenic not near genes chrX_8_19470001 chrX_19470001 RAL-900_125b 4178 chrX 19472100 19472154 chrX 19472693 19472757 jockey 16 613 4.5 3.0 3.8 3.3 657 chrX 19472100 intergenic kek5 + chrX 19472428 intergenic not near genes chrX 19472757 intergenic not near genes chrX_16_19470001 chrX_19470001 RAL-900_125b 4179 chrX 19508844 19508914 chrX 19509063 19509133 35 217 5.0 8.5 6.8 4.5 289 chrX 19508844 intron,3` UTR CG14200 +,Pfrx + chrX 19508988 intron,3` UTR CG14200 +,Pfrx + chrX 19509133 intron,3` UTR CG14200 +,Pfrx + chrX_35_19505001 chrX_19505001 RAL-900_125b 4180 chrX 19541386 19541443 chrX 19541509 19541573 34 129 9.0 8.5 8.8 3.5 187 chrX 19541386 intron CG32532 - chrX 19541480 intron CG32532 - chrX 19541573 intron CG32532 - chrX_34_19540001 chrX_19540001 RAL-900_125b 4181 chrX 19542089 19542142 chrX 19542237 19542290 24 148 9.5 0.0 4.8 4.1 201 chrX 19542089 intron CG32532 - chrX 19542190 intron CG32532 - chrX 19542290 intron CG32532 - chrX_24_19540001 chrX_19540001 RAL-900_125b 4182 chrX 19560629 19560679 chrX 19560778 19560827 21 149 10.0 15.0 12.5 1.6 198 chrX 19560629 3` UTR Grip84 - chrX 19560728 3` UTR Grip84 - chrX 19560827 3` UTR Grip84 - chrX_21_19560001 chrX_19560001 RAL-900_125b 4183 chrX 19576514 19576582 chrX 19576637 19576691 22 126 2.5 5.5 4.0 4.4 177 chrX 19576514 intron Tao - chrX 19576602 intron Tao - chrX 19576691 intron Tao - chrX_22_19575001 chrX_19575001 RAL-900_125b 4184 chrX 19593905 19593972 chrX 19594040 19594107 24 135 5.5 6.5 6.0 3.4 202 chrX 19593905 exon CG14205 + chrX 19594006 intron CG14205 + chrX 19594107 exon CG14205 + chrX_24_19590001 chrX_19590001 RAL-900_125b 4185 chrX 19687423 19687477 chrX 19687548 19687552 9 115 22.0 13.5 17.8 0.5 129 chrX 19687423 3` UTR Ubqn + chrX 19687488 3` UTR Ubqn + chrX 19687552 3` UTR Ubqn + chrX_9_19685001 chrX_19685001 RAL-900_125b 4186 chrX 19689366 19689436 chrX 19689494 19689564 39 126 10.0 9.5 9.8 3.6 198 chrX 19689366 intergenic Mer -,CG14227 - chrX 19689465 intergenic Mer - chrX 19689564 intergenic Mer - chrX_39_19685001 chrX_19685001 RAL-900_125b 4187 chrX 19710063 19710099 chrX 19711864 19711920 S-element 17 1833 9.0 6.0 7.5 2.0 1857 chrX 19710063 intron meso18E - chrX 19710992 intron meso18E - chrX 19711920 intron meso18E - chrX_17_19710001 chrX_19710001 RAL-900_125b 4188 chrX 19762540 19762570 chrX 19762670 19762700 5 130 18.0 6.0 12.0 0.4 160 chrX 19762540 5` UTR CG12702 - chrX 19762620 5` UTR CG12702 - chrX 19762700 5` UTR CG12702 - chrX_5_19760001 chrX_19760001 RAL-900_125b 4189 chrX 19797299 19797340 chrX 19804660 19804701 Stalker4 14 7361 14.5 4.0 9.2 1.4 7402 chrX 19797299 intergenic not near genes chrX 19801000 intergenic not near genes chrX 19804701 intergenic not near genes chrX_14_19800001 chrX_19800001 RAL-900_125b 4190 chrX 19819813 19819853 chrX 19820778 19820818 3S18 12 965 7.0 11.5 9.2 1.2 1005 chrX 19819813 intergenic not near genes chrX 19820316 intergenic not near genes chrX 19820818 intergenic not near genes chrX_12_19820001 chrX_19820001 RAL-900_125b 4191 chrX 19838470 19838482 chrX 19838598 19838610 5 128 8.5 13.0 10.8 0.4 140 chrX 19838470 intron pico - chrX 19838540 intron pico - chrX 19838610 intron pico - chrX_5_19835001 chrX_19835001 RAL-900_125b 4192 chrX 19838492 19838527 chrX 19838590 19838595 6 113 7.0 12.0 9.5 0.6 103 chrX 19838492 intron pico - chrX 19838544 intron pico - chrX 19838595 intron pico - chrX_6_19835001 chrX_19835001 RAL-900_125b 4193 chrX 19880337 19880393 chrX 19880506 19880562 18 169 6.5 6.0 6.2 2.5 225 chrX 19880337 intron Hers + chrX 19880450 intron Hers + chrX 19880562 intron Hers + chrX_18_19880001 chrX_19880001 RAL-900_125b 4194 chrX 19881413 19881477 chrX 19881544 19881608 30 130 7.0 7.5 7.2 3.7 195 chrX 19881413 intron Hers + chrX 19881510 intron Hers + chrX 19881608 intron Hers + chrX_30_19880001 chrX_19880001 RAL-900_125b 4195 chrX 19884061 19884114 chrX 19884173 19884213 12 108 9.5 11.0 10.2 1.1 152 chrX 19884061 intron Hers + chrX 19884137 intron Hers + chrX 19884213 intron Hers + chrX_12_19880001 chrX_19880001 RAL-900_125b 4196 chrX 19971772 19971819 chrX 19971897 19971946 15 127 9.5 8.5 9.0 1.5 174 chrX 19971772 intergenic not near genes chrX 19971859 intergenic not near genes chrX 19971946 intergenic not near genes chrX_15_19970001 chrX_19970001 RAL-900_125b 4197 chrX 19983849 19983873 chrX 19983979 19984003 15 130 0.0 7.5 3.8 3.1 154 chrX 19983849 intergenic not near genes chrX 19983926 intergenic not near genes chrX 19984003 intergenic not near genes chrX_15_19980001 chrX_19980001 RAL-900_125b 4198 chrX 19992379 19992435 chrX 19992496 19992542 11 115 9.5 8.0 8.8 1.1 163 chrX 19992379 intergenic not near genes chrX 19992460 intergenic not near genes chrX 19992542 intergenic not near genes chrX_11_19990001 chrX_19990001 RAL-900_125b 4199 chrX 20041480 20041554 chrX 20041610 20041684 20 130 7.0 8.5 7.8 2.3 204 chrX 20041480 intron Dop2R - chrX 20041582 intron Dop2R - chrX 20041684 intron Dop2R - chrX_20_20040001 chrX_20040001 RAL-900_125b 4200 chrX 20052744 20052813 chrX 20052878 20052923 14 123 2.5 4.5 3.5 3.1 179 chrX 20052744 intron Dop2R - chrX 20052834 intron Dop2R - chrX 20052923 intron Dop2R - chrX_14_20050001 chrX_20050001 RAL-900_125b 4201 chrX 20124036 20124110 chrX 20124225 20124299 21 189 5.0 8.0 6.5 2.8 263 chrX 20124036 intron CG34331 + chrX 20124168 intron CG34331 + chrX 20124299 intron CG34331 + chrX_21_20120001 chrX_20120001 RAL-900_125b 4202 chrX 20126840 20126909 chrX 20126969 20127038 9 123 6.5 6.5 6.5 1.2 198 chrX 20126840 intergenic not near genes chrX 20126939 intergenic not near genes chrX 20127038 intergenic not near genes chrX_9_20125001 chrX_20125001 RAL-900_125b 4203 chrX 20132256 20132308 chrX 20132389 20132441 18 130 8.5 3.5 6.0 2.6 185 chrX 20132256 intergenic not near genes chrX 20132348 intergenic not near genes chrX 20132441 intergenic not near genes chrX_18_20130001 chrX_20130001 RAL-900_125b 4204 chrX 20133111 20133174 chrX 20133274 20133337 22 161 0.0 4.0 2.0 7.3 226 chrX 20133111 intergenic CG15322 + chrX 20133224 intergenic CG15322 + chrX 20133337 intergenic CG15322 + chrX_22_20130001 chrX_20130001 RAL-900_125b 4205 chrX 20263380 20263440 chrX 20263520 20263559 16 135 6.5 8.5 7.5 1.9 179 chrX 20263380 intergenic not near genes chrX 20263470 intergenic not near genes chrX 20263559 intergenic not near genes chrX_16_20260001 chrX_20260001 RAL-900_125b 4206 chrX 20271464 20271526 chrX 20271596 20271663 7 139 8.5 0.0 4.2 1.3 199 chrX 20271464 intergenic not near genes chrX 20271564 intergenic not near genes chrX 20271663 intergenic not near genes chrX_7_20270001 chrX_20270001 RAL-900_125b 4207 chrX 20279702 20279776 chrX 20279833 20279907 36 131 6.0 7.0 6.5 4.8 205 chrX 20279702 intergenic not near genes chrX 20279804 intergenic not near genes chrX 20279907 intergenic not near genes chrX_36_20275001 chrX_20275001 RAL-900_125b 4208 chrX 20312833 20312910 chrX 20312961 20313038 26 128 9.5 7.0 8.2 2.8 205 chrX 20312833 intron CG1504 - chrX 20312936 intron CG1504 - chrX 20313038 intron CG1504 - chrX_26_20310001 chrX_20310001 RAL-900_125b 4209 chrX 20320253 20320305 chrX 20320380 20320432 25 126 7.5 3.5 5.5 3.8 179 chrX 20320253 intron CG1504 - chrX 20320342 intron CG1504 - chrX 20320432 intron CG1504 - chrX_25_20320001 chrX_20320001 RAL-900_125b 4210 chrX 20369269 20369340 chrX 20369403 20369474 28 134 4.0 8.5 6.2 3.9 205 chrX 20369269 intergenic not near genes chrX 20369372 intergenic not near genes chrX 20369474 intergenic not near genes chrX_28_20365001 chrX_20365001 RAL-900_125b 4211 chrX 20377274 20377339 chrX 20378791 20378814 hobo 10 1511 8.5 4.5 6.5 1.3 1540 chrX 20377274 intergenic not near genes chrX 20378044 intergenic not near genes chrX 20378814 intergenic not near genes chrX_10_20375001 chrX_20375001 RAL-900_125b 4212 chrX 20415028 20415082 chrX 20415154 20415208 14 126 5.5 1.5 3.5 3.1 180 chrX 20415028 intergenic not near genes chrX 20415118 intergenic not near genes chrX 20415208 intergenic not near genes chrX_14_20415001 chrX_20415001 RAL-900_125b 4213 chrX 20443160 20443195 chrX 20443286 20443321 9 126 4.5 11.0 7.8 1.0 161 chrX 20443160 exon CG1695 + chrX 20443240 intron CG1695 + chrX 20443321 intron CG1695 + chrX_9_20440001 chrX_20440001 RAL-900_125b 4214 chrX 20464124 20464162 chrX 20467643 20467707 10 3531 31.0 49.5 40.2 0.2 3583 chrX 20464124 exon CG32506 + chrX 20465916 3` UTR CG32506 + chrX 20467707 5` UTR GstT3 + chrX_10_20465001 chrX_20465001 RAL-900_125b 4215 chrX 20467969 20468042 chrX 20468108 20468174 23 136 9.0 4.5 6.8 2.9 205 chrX 20467969 intron GstT3 + chrX 20468072 intron GstT3 + chrX 20468174 intron GstT3 + chrX_23_20465001 chrX_20465001 RAL-900_125b 4216 chrX 20526424 20526714 chrX 20526590 20526847 27 144 0.0 0.0 0.0 27.0 423 chrX 20526424 intergenic not near genes chrX 20526636 intergenic not near genes chrX 20526847 intergenic not near genes chrX_27_20525001 chrX_20525001 RAL-900_125b 4217 chrX 20528561 20528618 chrX 20528959 20529016 27 398 6.0 7.5 6.8 3.5 455 chrX 20528561 intergenic not near genes chrX 20528788 intergenic not near genes chrX 20529016 intergenic not near genes chrX_27_20525001 chrX_20525001 RAL-900_125b 4218 chrX 20531645 20531686 chrX 20531785 20531826 6 140 11.0 8.0 9.5 0.6 181 chrX 20531645 intergenic not near genes chrX 20531736 intergenic not near genes chrX 20531826 intergenic not near genes chrX_6_20530001 chrX_20530001 RAL-900_125b 4219 chrX 20546501 20546561 chrX 20546717 20546777 24 216 6.5 7.5 7.0 3.0 276 chrX 20546501 intron RunxB + chrX 20546639 intron RunxB + chrX 20546777 intron RunxB + chrX_24_20545001 chrX_20545001 RAL-900_125b 4220 chrX 20558615 20558666 chrX 20558744 20558785 13 127 11.5 1.5 6.5 1.7 170 chrX 20558615 intron RunxB + chrX 20558700 intron RunxB + chrX 20558785 intron RunxB + chrX_13_20555001 chrX_20555001 RAL-900_125b 4221 chrX 20559099 20559155 chrX 20559227 20559293 16 129 0.0 11.0 5.5 2.5 194 chrX 20559099 intron RunxB + chrX 20559196 intron RunxB + chrX 20559293 intron RunxB + chrX_16_20555001 chrX_20555001 RAL-900_125b 4222 chrX 20568234 20568257 chrX 20568373 20568396 INE-1 14 138 0.5 5.0 2.8 3.7 162 chrX 20568234 intergenic not near genes chrX 20568315 intergenic not near genes chrX 20568396 intergenic not near genes chrX_14_20565001 chrX_20565001 RAL-900_125b 4223 chrX 20615093 20615106 chrX 20615228 20615241 5 135 7.0 0.0 3.5 1.1 148 chrX 20615093 intron RunxA - chrX 20615167 intron RunxA - chrX 20615241 intron RunxA - chrX_5_20615001 chrX_20615001 RAL-900_125b 4224 chrX 20704137 20704183 chrX 20704449 20704495 15 311 0.0 3.0 1.5 6.0 358 chrX 20704137 intergenic not near genes chrX 20704316 intergenic not near genes chrX 20704495 intergenic not near genes chrX_15_20700001 chrX_20700001 RAL-900_125b 4225 chrX 20708366 20708374 chrX 20708468 20708500 4 120 9.5 8.0 8.8 0.4 134 chrX 20708366 intergenic not near genes chrX 20708433 intergenic not near genes chrX 20708500 intergenic not near genes chrX_4_20705001 chrX_20705001 RAL-900_125b 4226 chrX 20710377 20710419 chrX 20710503 20710546 10 127 8.0 0.5 4.2 1.9 169 chrX 20710377 intergenic not near genes chrX 20710462 intergenic not near genes chrX 20710546 intergenic not near genes chrX_10_20710001 chrX_20710001 RAL-900_125b 4227 chrX 20719155 20719200 chrX 20719538 20719583 17 382 2.5 6.0 4.2 3.3 428 chrX 20719155 intergenic not near genes chrX 20719369 intergenic not near genes chrX 20719583 intergenic not near genes chrX_17_20715001 chrX_20715001 RAL-900_125b 4228 chrX 20721704 20721875 chrX 20721871 20722022 5 168 0.0 0.0 0.0 5.0 318 chrX 20721704 intergenic not near genes chrX 20721863 intergenic not near genes chrX 20722022 intergenic not near genes chrX_5_20720001 chrX_20720001 RAL-900_125b 4229 chrX 20780179 20780224 chrX 20780454 20780499 17 274 10.0 5.5 7.8 1.9 320 chrX 20780179 intron,3` UTR shakB -,CG32507 - chrX 20780339 intron,3` UTR shakB -,CG32507 - chrX 20780499 intron,3` UTR shakB -,CG32507 - chrX_17_20780001 chrX_20780001 RAL-900_125b 4230 chrX 20791508 20791587 chrX 20791658 20791737 17 150 4.5 4.5 4.5 3.1 229 chrX 20791508 intron shakB - chrX 20791622 intron shakB - chrX 20791737 intron shakB - chrX_17_20790001 chrX_20790001 RAL-900_125b 4231 chrX 20810673 20810683 chrX 20810800 20810810 6 127 10.0 6.5 8.2 0.7 137 chrX 20810673 intron shakB - chrX 20810742 intron shakB - chrX 20810810 intron shakB - chrX_6_20810001 chrX_20810001 RAL-900_125b 4232 chrX 20810734 20810749 chrX 20810862 20810877 7 128 3.0 14.0 8.5 0.7 143 chrX 20810734 intron shakB - chrX 20810806 intron shakB - chrX 20810877 intron shakB - chrX_7_20810001 chrX_20810001 RAL-900_125b 4233 chrX 20836696 20836754 chrX 20844348 20844388 roo 21 7651 7.5 4.5 6.0 3.0 7692 chrX 20836696 intron shakB - chrX 20840542 intron shakB - chrX 20844388 intron shakB - chrX_21_20840001 chrX_20840001 RAL-900_125b 4234 chrX 20940679 20940734 chrX 20942198 20942217 hobo 14 1516 5.5 11.0 8.2 1.5 1538 chrX 20940679 intergenic not near genes chrX 20941448 intergenic not near genes chrX 20942217 intergenic not near genes chrX_14_20940001 chrX_20940001 RAL-900_125b 4235 chrX 20956923 20956948 chrX 20962418 20962443 I-element 14 5494 0.0 3.0 1.5 5.6 5520 chrX 20956923 intergenic not near genes chrX 20959683 intergenic not near genes chrX 20962443 intergenic Ser6 - chrX_14_20955001 chrX_20955001 RAL-900_125b 4236 chrX 20980988 20981053 chrX 20981141 20981206 18 153 4.5 3.5 4.0 3.6 218 chrX 20980988 intergenic not near genes chrX 20981097 intergenic not near genes chrX 20981206 intergenic not near genes chrX_18_20980001 chrX_20980001 RAL-900_125b 4237 chrX 20988834 20988856 chrX 20988986 20988993 4 148 13.0 12.5 12.8 0.3 159 chrX 20988834 intergenic not near genes chrX 20988914 intergenic not near genes chrX 20988993 intergenic not near genes chrX_4_20985001 chrX_20985001 RAL-900_125b 4238 chrX 21029096 21029174 chrX 21029363 21029437 10 266 0.5 9.5 5.0 1.7 341 chrX 21029096 3` UTR CG1529 - chrX 21029266 3` UTR CG1529 - chrX 21029437 3` UTR CG1529 - chrX_10_21025001 chrX_21025001 RAL-900_125b 4239 chrX 21032216 21032235 chrX 21035233 21035256 Rt1b 4 3020 9.5 38.5 24.0 0.2 3040 chrX 21032216 intergenic CG1529 - chrX 21033736 intergenic not near genes chrX 21035256 intergenic Ntf-2 + chrX_4_21030001 chrX_21030001 RAL-900_125b 4240 chrX 21032263 21032285 chrX 21032405 21032427 6 142 3.5 10.5 7.0 0.8 164 chrX 21032263 intergenic CG1529 - chrX 21032345 intergenic CG1529 - chrX 21032427 intergenic CG1529 - chrX_6_21030001 chrX_21030001 RAL-900_125b 4241 chrX 21042563 21042616 chrX 21045298 21045351 15 2738 52.0 50.5 51.2 0.3 2788 chrX 21042563 exon Mgstl + chrX 21043957 exon,3` UTR Mgstl +,CR44431 - chrX 21045351 intron Cbs + chrX_15_21040001 chrX_21040001 RAL-900_125b 4242 chrX 21086089 21086154 chrX 21087168 21087233 jockey 28 1078 7.0 9.0 8.0 3.1 1144 chrX 21086089 intergenic not near genes chrX 21086661 intergenic not near genes chrX 21087233 intergenic not near genes chrX_28_21085001 chrX_21085001 RAL-900_125b 4243 chrX 21087996 21088054 chrX 21088178 21088229 20 182 6.5 4.0 5.2 3.2 233 chrX 21087996 intergenic not near genes chrX 21088112 intergenic not near genes chrX 21088229 intergenic not near genes chrX_20_21085001 chrX_21085001 RAL-900_125b 4244 chrX 21166092 21166163 chrX 21166220 21166294 20 128 7.5 6.5 7.0 2.5 202 chrX 21166092 intergenic not near genes chrX 21166193 intergenic not near genes chrX 21166294 intergenic not near genes chrX_20_21165001 chrX_21165001 RAL-900_125b 4245 chrX 21197011 21197086 chrX 21197139 21197214 23 127 8.5 6.0 7.2 2.8 203 chrX 21197011 intergenic not near genes chrX 21197112 intergenic not near genes chrX 21197214 intergenic not near genes chrX_23_21195001 chrX_21195001 RAL-900_125b 4246 chrX 21241706 21241719 chrX 21241857 21241870 7 151 6.0 0.0 3.0 1.8 164 chrX 21241706 intron CG32521 - chrX 21241788 intron CG32521 - chrX 21241870 intron CG32521 - chrX_7_21240001 chrX_21240001 RAL-900_125b 4247 chrX 21254609 21254618 chrX 21255567 21255584 hopper2 6 962 6.0 0.0 3.0 1.5 975 chrX 21254609 intron CG32521 - chrX 21255096 intron CG32521 - chrX 21255584 intron CG32521 - chrX_6_21255001 chrX_21255001 RAL-900_125b 4248 chrX 21254619 21254666 chrX 21255565 21255634 hopper2 22 964 6.0 0.0 3.0 5.5 1015 chrX 21254619 intron CG32521 - chrX 21255126 intron CG32521 - chrX 21255634 intron CG32521 - chrX_22_21255001 chrX_21255001 RAL-900_125b 4249 chrX 21303153 21303228 chrX 21303293 21303368 28 140 8.0 5.0 6.5 3.7 215 chrX 21303153 intron CG1718 - chrX 21303260 intron CG1718 - chrX 21303368 intron CG1718 - chrX_28_21300001 chrX_21300001 RAL-900_125b 4250 chrX 21308828 21308863 chrX 21308983 21309039 11 170 6.5 0.0 3.2 2.6 211 chrX 21308828 exon CG1801 - chrX 21308934 intron CG1801 - chrX 21309039 intron CG1801 - chrX_11_21305001 chrX_21305001 RAL-900_125b 4251 chrX 21328068 21328146 chrX 21328229 21328308 27 159 7.5 8.0 7.8 3.1 240 chrX 21328068 3` UTR CG1486 + chrX 21328188 intergenic CG1486 +,tty - chrX 21328308 intergenic CG1486 +,tty - chrX_27_21325001 chrX_21325001 RAL-900_125b 4252 chrX 21388347 21388364 chrX 21388554 21388571 5 207 1.0 4.5 2.8 1.3 224 chrX 21388347 intergenic Hlc - chrX 21388459 intergenic not near genes chrX 21388571 intergenic mst + chrX_5_21385001 chrX_21385001 RAL-900_125b 4253 chrX 21388365 21388403 chrX 21388543 21388610 12 202 1.0 4.5 2.8 3.2 245 chrX 21388365 intergenic Hlc - chrX 21388488 intergenic mst + chrX 21388610 intergenic mst + chrX_12_21385001 chrX_21385001 RAL-900_125b 4254 chrX 21400364 21400421 chrX 21400531 21400568 18 159 3.5 4.5 4.0 3.6 204 chrX 21400364 3` UTR CR45500 - chrX 21400466 3` UTR CR45500 - chrX 21400568 3` UTR CR45500 - chrX_18_21400001 chrX_21400001 RAL-900_125b 4255 chrX 21419660 21419731 chrX 21419799 21419870 26 139 3.5 4.0 3.8 5.4 210 chrX 21419660 intergenic not near genes chrX 21419765 intergenic not near genes chrX 21419870 intergenic not near genes chrX_26_21415001 chrX_21415001 RAL-900_125b 4256 chrX 21454821 21454869 chrX 21454955 21455003 15 134 5.5 8.5 7.0 1.9 182 chrX 21454821 intron CG42343 - chrX 21454912 intron CG42343 - chrX 21455003 intron CG42343 - chrX_15_21450001 chrX_21450001 RAL-900_125b 4257 chrX 21455216 21455410 chrX 21455511 21455577 22 254 0.0 0.0 0.0 22.0 361 chrX 21455216 intron CG42343 - chrX 21455396 intron CG42343 - chrX 21455577 intron CG42343 - chrX_22_21455001 chrX_21455001 RAL-900_125b 4258 chrX 21458650 21458727 chrX 21464136 21464212 Ivk 35 5486 6.0 9.0 7.5 4.1 5562 chrX 21458650 intergenic not near genes chrX 21461431 intergenic not near genes chrX 21464212 intergenic not near genes chrX_35_21460001 chrX_21460001 RAL-900_125b 4259 chrX 21474385 21474432 chrX 21474785 21474848 1731 18 414 9.0 7.5 8.2 2.0 463 chrX 21474385 intergenic not near genes chrX 21474616 intergenic not near genes chrX 21474848 intergenic not near genes chrX_18_21470001 chrX_21470001 RAL-900_125b 4260 chrX 21475551 21475686 chrX 21475682 21475771 14 138 1.0 0.0 0.5 9.3 220 chrX 21475551 intergenic not near genes chrX 21475661 intergenic not near genes chrX 21475771 intergenic not near genes chrX_14_21475001 chrX_21475001 RAL-900_125b 4261 chrX 21565393 21565432 chrX 21565502 21565560 13 124 7.0 8.5 7.8 1.5 167 chrX 21565393 intergenic not near genes chrX 21565476 intergenic not near genes chrX 21565560 intergenic not near genes chrX_13_21565001 chrX_21565001 RAL-900_125b 4262 chrX 21567917 21567929 chrX 21568041 21568050 5 124 14.5 0.5 7.5 0.6 133 chrX 21567917 intergenic not near genes chrX 21567984 intergenic not near genes chrX 21568050 intergenic not near genes chrX_5_21565001 chrX_21565001 RAL-900_125b 4263 chrX 21595551 21595575 chrX 21598655 21598679 micropia 9 3104 11.0 12.5 11.8 0.7 3128 chrX 21595551 intergenic not near genes chrX 21597115 intergenic not near genes chrX 21598679 intergenic not near genes chrX_9_21595001 chrX_21595001 RAL-900_125b 4264 chrX 21668214 21668287 chrX 21668348 21668422 31 134 58.5 53.0 55.8 0.5 208 chrX 21668214 intergenic not near genes chrX 21668318 intergenic not near genes chrX 21668422 intergenic not near genes chrX_31_21665001 chrX_21665001 RAL-900_125b 4265 chrX 22478880 22478895 chrX 22479057 22479078 7 182 0.0 17.0 8.5 0.7 198 chrX 22478880 intron CG12576 - chrX 22478979 intron CG12576 - chrX 22479078 intron CG12576 - chrX_7_22475001 chrX_22475001 RAL-900_125b 4266 chrX 22522588 22522660 chrX 22525459 22525530 NOF 13 2870 6.0 7.5 6.8 1.7 2942 chrX 22522588 intron CG17600 + chrX 22524059 intron CG17600 + chrX 22525530 intron CG17600 + chrX_13_22520001 chrX_22520001 RAL-900_125b 4267 chrX 22544405 22544441 chrX 22544535 22544571 8 130 2.5 6.0 4.2 1.5 166 chrX 22544405 intergenic CG17599 - chrX 22544488 intergenic CG17599 - chrX 22544571 intergenic CG17599 - chrX_8_22540001 chrX_22540001 RAL-900_125b 4268 chrX 22574761 22574830 chrX 22575046 22575115 22 285 8.0 3.0 5.5 3.4 354 chrX 22574761 intergenic not near genes chrX 22574938 intergenic not near genes chrX 22575115 intergenic not near genes chrX_22_22570001 chrX_22570001 RAL-900_125b 4269 chrX 22564566 22564585 chrX 22575095 22575107 jockey 6 10523 31.0 3.0 17.0 0.3 10541 chrX 22564566 intergenic not near genes chrX 22569836 intergenic not near genes chrX 22575107 intergenic not near genes chrX_6_22565001 chrX_22565001 RAL-900_125b 4270 chrX 22628125 22628186 chrX 22628512 22628573 18 386 6.0 9.0 7.5 2.1 448 chrX 22628125 intron Cda4 - chrX 22628349 intron Cda4 - chrX 22628573 intron Cda4 - chrX_18_22625001 chrX_22625001 RAL-900_125b 4271 chrX 22660530 22660603 chrX 22660664 22660737 22 134 6.5 7.0 6.8 2.8 207 chrX 22660530 intron CR44997 + chrX 22660634 intron CR44997 + chrX 22660737 intron CR44997 + chrX_22_22660001 chrX_22660001 RAL-900_125b 4272 chrX 22677250 22677323 chrX 22677509 22677582 18 259 4.5 3.5 4.0 3.6 332 chrX 22677250 intron CR44997 + chrX 22677416 intron CR44997 + chrX 22677582 intron CR44997 + chrX_18_22675001 chrX_22675001 RAL-900_125b 4273 chrX 22681437 22681477 chrX 22688943 22688983 HMS-Beagle2 15 7505 9.5 5.5 7.5 1.8 7546 chrX 22681437 intron CR44997 + chrX 22685210 intron CR44997 + chrX 22688983 intron CR44997 + chrX_15_22685001 chrX_22685001 RAL-900_125b 4274 chrX 22694304 22694349 chrX 22694445 22694490 11 141 4.0 5.0 4.5 2.0 186 chrX 22694304 intron CR44997 + chrX 22694397 intron CR44997 + chrX 22694490 intron CR44997 + chrX_11_22690001 chrX_22690001 RAL-900_125b 4275 chrX 22697455 22697513 chrX 22701802 22701860 Juan 19 4347 7.0 12.5 9.8 1.8 4405 chrX 22697455 intron CR44997 + chrX 22699658 intron CR44997 + chrX 22701860 intron CR44997 + chrX_19_22695001 chrX_22695001 RAL-900_125b 4276 chrX 22749776 22749801 chrX 22749916 22749933 6 141 12.5 8.5 10.5 0.5 157 chrX 22749776 intron CR44997 + chrX 22749854 intron CR44997 + chrX 22749933 intron CR44997 + chrX_6_22745001 chrX_22745001 RAL-900_125b 4277 chrX 22764325 22764398 chrX 22764471 22764544 19 146 6.0 5.5 5.8 2.8 219 chrX 22764325 intron CR44997 + chrX 22764434 intron CR44997 + chrX 22764544 intron,3` UTR CR44997 +,CR44109 - chrX_19_22760001 chrX_22760001 RAL-900_125b 4278 chrX 22765019 22765027 chrX 22765192 22765200 INE-1 5 173 13.0 7.5 10.2 0.4 181 chrX 22765019 intron,intron CR44997 +,CR44109 - chrX 22765110 intron,intron CR44997 +,CR44109 - chrX 22765200 intron,intron CR44997 +,CR44109 - chrX_5_22765001 chrX_22765001 RAL-900_125b 4279 chrX 22771466 22771524 chrX 22774807 22774865 297 12 3338 10.5 9.0 9.8 1.1 3399 chrX 22771466 intron CR44997 + chrX 22773166 intron CR44997 + chrX 22774865 intron CR44997 + chrX_12_22770001 chrX_22770001 RAL-900_125b 4280 chrX 22798723 22798792 chrX 22798890 22798952 30 164 4.0 5.0 4.5 5.5 229 chrX 22798723 intergenic not near genes chrX 22798838 intergenic not near genes chrX 22798952 intergenic not near genes chrX_30_22795001 chrX_22795001 RAL-900_125b 4281 chrX 22811958 22812005 chrX 22816781 22816828 F-element 15 4823 13.0 8.5 10.8 1.3 4870 chrX 22811958 intergenic CG12446 - chrX 22814393 intergenic not near genes chrX 22816828 intergenic not near genes chrX_15_22810001 chrX_22810001 RAL-900_125b 4282 chrX 22824218 22824440 chrX 22824394 22824623 42 180 0.0 0.0 0.0 42.0 405 chrX 22824218 intergenic fog - chrX 22824420 3` UTR fog - chrX 22824623 3` UTR fog - chrX_42_22820001 chrX_22820001 RAL-900_125b 4283 chrX 22844490 22844527 chrX 22844627 22844664 16 137 11.0 5.5 8.2 1.7 174 chrX 22844490 intron,intron fog -,CG42346 + chrX 22844577 intron,intron fog -,CG42346 + chrX 22844664 intron,intron fog -,CG42346 + chrX_16_22840001 chrX_22840001 RAL-900_125b 4284 chrX 22869140 22869151 chrX 22869266 22869266 6 124 2.5 4.5 3.5 1.3 126 chrX 22869140 intron CG42346 + chrX 22869203 intron CG42346 + chrX 22869266 intron CG42346 + chrX_6_22865001 chrX_22865001 RAL-900_125b 4285 chrX 22891091 22891126 chrX 22891224 22891259 15 133 7.0 5.0 6.0 2.1 168 chrX 22891091 intergenic not near genes chrX 22891175 intergenic not near genes chrX 22891259 intergenic not near genes chrX_15_22890001 chrX_22890001 RAL-900_125b 4286 chrX 22916116 22916197 chrX 22916314 22916383 14 191 0.0 3.5 1.8 5.0 267 chrX 22916116 intergenic not near genes chrX 22916250 intergenic not near genes chrX 22916383 intergenic not near genes chrX_14_22915001 chrX_22915001 RAL-900_125b 4287 chrX 22922473 22922540 chrX 22922603 22922670 20 128 1.5 7.0 4.2 3.8 197 chrX 22922473 intergenic not near genes chrX 22922572 intergenic not near genes chrX 22922670 intergenic not near genes chrX_20_22920001 chrX_22920001 RAL-900_125b 4288 chrX 22967343 22967369 chrX 23154544 23154570 diver 4 187201 14.5 33.0 23.8 0.2 187227 chrX 22967343 intergenic not near genes chrX 23060956 intergenic not near genes chrX 23154570 intergenic not near genes chrX_4_23060001 chrX_23060001 RAL-900_125b 4289 chrX 22987078 22987121 chrX 22989770 22989830 Burdock 24 2708 7.5 10.0 8.8 2.4 2752 chrX 22987078 intron,intron stnA -,stnB - chrX 22988454 intron,intron stnA -,stnB - chrX 22989830 intron,intron stnA -,stnB - chrX_24_22985001 chrX_22985001 RAL-900_125b 4290 chrX 22996271 22996325 chrX 23003555 23003609 roo 29 7284 6.5 10.5 8.5 3.1 7338 chrX 22996271 intron,intron stnA -,stnB - chrX 22999940 intron,intron stnA -,stnB - chrX 23003609 intron,intron stnA -,stnB - chrX_29_22995001 chrX_22995001 RAL-900_125b 4291 chrX 22931554 22931566 chrX 23108341 23108353 4 176787 0.0 41.5 20.8 0.2 176799 chrX 22931554 intergenic not near genes chrX 23019954 intergenic not near genes chrX 23108353 intergenic ATbp + chrX_4_23015001 chrX_23015001 RAL-900_125b 4292 chrX 22967502 22967529 chrX 23154544 23154554 diver 4 187029 1.5 33.0 17.2 0.2 187052 chrX 22967502 intergenic not near genes chrX 23061028 intergenic not near genes chrX 23154554 intergenic not near genes chrX_4_23060001 chrX_23060001 RAL-900_125b 4293 chrY 864668 864742 chrY 864795 864868 13 127 54.0 58.0 56.0 0.2 200 chrY 864668 intergenic not near genes chrY 864768 intergenic not near genes chrY 864868 intergenic not near genes chrY_13_860001 chrY_860001 RAL-900_125b 4294 chrY 975600 975751 chrY 975767 975966 6 241 220.0 221.5 220.8 0.0 366 chrY 975600 intergenic not near genes chrY 975783 intergenic not near genes chrY 975966 intergenic not near genes chrY_6_975001 chrY_975001 RAL-900_125b 4295 chrY 975756 975810 chrY 975886 975930 11 135 231.5 243.5 237.5 0.0 174 chrY 975756 intergenic not near genes chrY 975843 intergenic not near genes chrY 975930 intergenic not near genes chrY_11_975001 chrY_975001 RAL-900_125b 4296 chrY 1419863 1419882 chrY 1420167 1420186 6 304 31.0 25.5 28.2 0.2 323 chrY 1419863 intergenic not near genes chrY 1420024 intergenic not near genes chrY 1420186 intergenic not near genes chrY_6_1420001 chrY_1420001 RAL-900_125b 4297 chrY 1445411 1445439 chrY 1447399 1447419 15 1981 36.0 22.5 29.2 0.5 2008 chrY 1445411 intergenic not near genes chrY 1446415 intergenic not near genes chrY 1447419 intergenic not near genes chrY_15_1445001 chrY_1445001 RAL-900_125b 4298 chrY 2447699 2447726 chrY 2448324 2448351 opus 4 625 1.5 0.5 1.0 2.0 652 chrY 2447699 intergenic not near genes chrY 2448025 intergenic not near genes chrY 2448351 intergenic not near genes chrY_4_2445001 chrY_2445001 RAL-900_125b 4299 chrY 3561969 3562014 chrY 3562102 3562147 4 133 9.5 10.0 9.8 0.4 178 chrY 3561969 intergenic not near genes chrY 3562058 intergenic not near genes chrY 3562147 intergenic not near genes chrY_4_3560001 chrY_3560001 RAL-900_125b 4300 chrY 3664946 3665016 chrY 3665100 3665170 4 154 0.0 1.5 0.8 2.2 224 chrY 3664946 intergenic CG40948 + chrY 3665058 intergenic not near genes chrY 3665170 intergenic not near genes chrY_4_3665001 chrY_3665001 RAL-900_125b