SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47445 47483 chr2L 52570 52608 jockey 9 5125 10.5 9.5 10.0 0.8 5163 chr2L 47445 intron Cda5 - chr2L 50026 intron Cda5 - chr2L 52608 intron Cda5 - chr2L_9_50001 chr2L_50001 RAL-894 2 chr2L 172038 172070 chr2L 172139 172171 10 101 5.5 7.0 6.2 1.4 133 chr2L 172038 intron spen + chr2L 172104 intron spen + chr2L 172171 intron spen + chr2L_10_170001 chr2L_170001 RAL-894 3 chr2L 177815 177864 chr2L 178022 178071 9 200 5.5 3.0 4.2 1.7 256 chr2L 177815 intron spen + chr2L 177943 intron spen + chr2L 178071 intron spen + chr2L_9_175001 chr2L_175001 RAL-894 4 chr2L 263289 263304 chr2L 263455 263470 5 165 1.0 2.0 1.5 2.0 181 chr2L 263289 intron,3` UTR CG3645 -,CG17075 - chr2L 263380 intron,3` UTR CG3645 -,CG17075 - chr2L 263470 intron,3` UTR CG3645 -,CG17075 - chr2L_5_260001 chr2L_260001 RAL-894 5 chr2L 263307 263330 chr2L 263445 263496 5 160 1.0 1.5 1.2 2.3 189 chr2L 263307 intron,3` UTR CG3645 -,CG17075 - chr2L 263402 intron,3` UTR CG3645 -,CG17075 - chr2L 263496 intron,3` UTR CG3645 -,CG17075 - chr2L_5_260001 chr2L_260001 RAL-894 6 chr2L 325898 325913 chr2L 325967 326001 7 85 4.5 3.5 4.0 1.4 103 chr2L 325898 intron,exon Plc21C +,CG43755 - chr2L 325950 intron,exon Plc21C +,CG43755 - chr2L 326001 intron,exon Plc21C +,CG43755 - chr2L_7_325001 chr2L_325001 RAL-894 7 chr2L 325914 325924 chr2L 325966 326004 4 82 2.5 3.5 3.0 1.0 90 chr2L 325914 intron,exon Plc21C +,CG43755 - chr2L 325959 intron,exon Plc21C +,CG43755 - chr2L 326004 intron,exon Plc21C +,CG43755 - chr2L_4_325001 chr2L_325001 RAL-894 8 chr2L 347880 347915 chr2L 355400 355405 blood 5 7511 4.5 8.5 6.5 0.7 7525 chr2L 347880 3` UTR Plc21C + chr2L 351642 intron Plc21C + chr2L 355405 3` UTR Plc21C + chr2L_5_350001 chr2L_350001 RAL-894 9 chr2L 528473 528491 chr2L 528571 528589 5 98 5.5 1.0 3.2 1.2 116 chr2L 528473 intron ush + chr2L 528531 intron ush + chr2L 528589 intron ush + chr2L_5_525001 chr2L_525001 RAL-894 10 chr2L 528492 528511 chr2L 528570 528609 6 94 3.0 1.0 2.0 2.0 117 chr2L 528492 intron ush + chr2L 528550 intron ush + chr2L 528609 intron ush + chr2L_6_525001 chr2L_525001 RAL-894 11 chr2L 676669 676701 chr2L 676766 676778 4 84 3.0 4.5 3.8 0.8 109 chr2L 676669 intron ds - chr2L 676724 intron ds - chr2L 676778 intron ds - chr2L_4_675001 chr2L_675001 RAL-894 12 chr2L 678393 678439 chr2L 678492 678539 7 99 3.0 3.0 3.0 1.8 146 chr2L 678393 intron ds - chr2L 678466 intron ds - chr2L 678539 intron ds - chr2L_7_675001 chr2L_675001 RAL-894 13 chr2L 764550 764569 chr2L 764671 764690 6 118 5.0 1.0 3.0 1.5 140 chr2L 764550 intergenic not near genes chr2L 764620 intergenic not near genes chr2L 764690 intergenic not near genes chr2L_6_760001 chr2L_760001 RAL-894 14 chr2L 770455 770478 chr2L 772255 772279 Bari1 4 1791 3.5 2.5 3.0 1.0 1824 chr2L 770455 intergenic not near genes chr2L 771367 intergenic not near genes chr2L 772279 intergenic CR44614 + chr2L_4_770001 chr2L_770001 RAL-894 15 chr2L 848616 848642 chr2L 848695 848725 5 83 2.0 3.5 2.8 1.3 109 chr2L 848616 intron drongo - chr2L 848670 intron drongo - chr2L 848725 intron drongo - chr2L_5_845001 chr2L_845001 RAL-894 16 chr2L 936569 936590 chr2L 936679 936700 5 104 1.5 2.5 2.0 1.7 131 chr2L 936569 intron CG4341 + chr2L 936634 intron CG4341 + chr2L 936700 intron CG4341 + chr2L_5_935001 chr2L_935001 RAL-894 17 chr2L 950297 950336 chr2L 950400 950441 8 98 5.0 3.0 4.0 1.6 144 chr2L 950297 intron CG4341 + chr2L 950369 intron CG4341 + chr2L 950441 intron CG4341 + chr2L_8_950001 chr2L_950001 RAL-894 18 chr2L 976871 976890 chr2L 984527 984532 roo 4 7652 5.5 0.0 2.8 1.1 7661 chr2L 976871 intergenic not near genes chr2L 980702 intergenic not near genes chr2L 984532 intergenic not near genes chr2L_4_980001 chr2L_980001 RAL-894 19 chr2L 996705 996712 chr2L 1005820 1005826 roo 4 9115 1.0 4.0 2.5 1.1 9121 chr2L 996705 intergenic not near genes chr2L 1001266 intergenic not near genes chr2L 1005826 intergenic not near genes chr2L_4_1000001 chr2L_1000001 RAL-894 20 chr2L 1042584 1042600 chr2L 1042694 1042710 6 110 3.0 0.0 1.5 2.4 126 chr2L 1042584 intron IA-2 - chr2L 1042647 intron IA-2 - chr2L 1042710 intron IA-2 - chr2L_6_1040001 chr2L_1040001 RAL-894 21 chr2L 1089959 1089999 chr2L 1090175 1090212 4 205 3.5 2.0 2.8 1.1 253 chr2L 1089959 intron CG4629 - chr2L 1090086 intron CG4629 - chr2L 1090212 intron CG4629 - chr2L_4_1090001 chr2L_1090001 RAL-894 22 chr2L 1096367 1096410 chr2L 1096461 1096509 4 96 0.5 1.5 1.0 2.0 142 chr2L 1096367 intron CG4629 - chr2L 1096438 intron CG4629 - chr2L 1096509 intron CG4629 - chr2L_4_1095001 chr2L_1095001 RAL-894 23 chr2L 1156845 1156890 chr2L 1156970 1157015 4 122 1.5 3.5 2.5 1.1 170 chr2L 1156845 intron capt - chr2L 1156930 intron capt - chr2L 1157015 intron capt - chr2L_4_1155001 chr2L_1155001 RAL-894 24 chr2L 1192665 1192683 chr2L 1192788 1192806 4 118 4.5 1.5 3.0 1.0 141 chr2L 1192665 intron CG5001 + chr2L 1192736 intron CG5001 + chr2L 1192806 intron CG5001 + chr2L_4_1190001 chr2L_1190001 RAL-894 25 chr2L 1215319 1215577 chr2L 1215446 1215670 27 93 2.5 8.5 5.5 4.2 351 chr2L 1215319 intergenic CR45346 - chr2L 1215494 intergenic CR45346 - chr2L 1215670 intergenic CR45346 - chr2L_27_1215001 chr2L_1215001 RAL-894 26 chr2L 1220107 1220161 chr2L 1227593 1227647 blood 14 7482 3.5 2.5 3.0 3.5 7540 chr2L 1220107 intron CG42329 + chr2L 1223877 intron CG42329 + chr2L 1227647 intron CG42329 + chr2L_14_1220001 chr2L_1220001 RAL-894 27 chr2L 1244406 1244420 chr2L 1244497 1244499 4 91 3.0 7.5 5.2 0.6 93 chr2L 1244406 intergenic not near genes chr2L 1244452 intergenic not near genes chr2L 1244499 intergenic not near genes chr2L_4_1240001 chr2L_1240001 RAL-894 28 chr2L 1261212 1261258 chr2L 1261313 1261344 6 93 0.0 2.0 1.0 3.0 132 chr2L 1261212 intron robo3 + chr2L 1261278 intron robo3 + chr2L 1261344 intron robo3 + chr2L_6_1260001 chr2L_1260001 RAL-894 29 chr2L 1301779 1301781 chr2L 1302338 1302340 gypsy 5 559 0.5 9.0 4.8 0.9 561 chr2L 1301779 intergenic not near genes chr2L 1302060 intergenic not near genes chr2L 1302340 intergenic not near genes chr2L_5_1300001 chr2L_1300001 RAL-894 30 chr2L 1333748 1333762 chr2L 1333868 1333907 5 136 0.0 3.0 1.5 2.0 159 chr2L 1333748 intergenic CG5440 + chr2L 1333828 intergenic CG5440 + chr2L 1333907 intergenic CG5440 + chr2L_5_1330001 chr2L_1330001 RAL-894 31 chr2L 1511973 1512005 chr2L 1512078 1512123 9 116 0.5 3.5 2.0 3.0 150 chr2L 1511973 intergenic not near genes chr2L 1512048 intergenic not near genes chr2L 1512123 intergenic not near genes chr2L_9_1510001 chr2L_1510001 RAL-894 32 chr2L 1539834 1539874 chr2L 1539947 1539987 15 113 5.5 2.5 4.0 3.0 153 chr2L 1539834 intergenic not near genes chr2L 1539910 intergenic not near genes chr2L 1539987 intergenic not near genes chr2L_15_1535001 chr2L_1535001 RAL-894 33 chr2L 1570669 1570708 chr2L 1573561 1573600 F-element 8 2890 4.0 2.0 3.0 2.0 2931 chr2L 1570669 intron haf + chr2L 1572134 intron haf + chr2L 1573600 intron haf + chr2L_8_1570001 chr2L_1570001 RAL-894 34 chr2L 1615376 1615401 chr2L 1615478 1615503 6 102 0.5 0.0 0.2 5.0 127 chr2L 1615376 intergenic not near genes chr2L 1615440 intergenic not near genes chr2L 1615503 intergenic not near genes chr2L_6_1615001 chr2L_1615001 RAL-894 35 chr2L 1650896 1650916 chr2L 1651005 1651052 6 130 2.0 0.0 1.0 3.0 156 chr2L 1650896 intergenic chinmo + chr2L 1650974 intergenic chinmo + chr2L 1651052 intergenic chinmo + chr2L_6_1650001 chr2L_1650001 RAL-894 36 chr2L 1678965 1679003 chr2L 1686450 1686477 blood 4 7479 3.0 5.5 4.2 0.8 7512 chr2L 1678965 intron chinmo + chr2L 1682721 intron chinmo + chr2L 1686477 intron chinmo + chr2L_4_1680001 chr2L_1680001 RAL-894 37 chr2L 1779042 1779093 chr2L 1779229 1779230 4 173 7.0 7.0 7.0 0.5 188 chr2L 1779042 intergenic not near genes chr2L 1779136 intergenic not near genes chr2L 1779230 intergenic not near genes chr2L_4_1775001 chr2L_1775001 RAL-894 38 chr2L 1879495 1879540 chr2L 1879615 1879659 7 119 1.5 4.5 3.0 1.8 164 chr2L 1879495 intron CG31663 - chr2L 1879577 intron CG31663 - chr2L 1879659 intron CG31663 - chr2L_7_1875001 chr2L_1875001 RAL-894 39 chr2L 1905066 1905111 chr2L 1905189 1905234 14 121 3.0 5.0 4.0 2.8 168 chr2L 1905066 intron CG7337 + chr2L 1905150 intron CG7337 + chr2L 1905234 intron CG7337 + chr2L_14_1905001 chr2L_1905001 RAL-894 40 chr2L 1925475 1925492 chr2L 1925567 1925568 6 92 4.0 1.5 2.8 1.6 93 chr2L 1925475 intron CG7337 + chr2L 1925522 intron CG7337 + chr2L 1925568 intron CG7337 + chr2L_6_1925001 chr2L_1925001 RAL-894 41 chr2L 1994564 1994605 chr2L 1994814 1994844 6 248 6.5 1.5 4.0 1.2 280 chr2L 1994564 intergenic not near genes chr2L 1994704 intergenic not near genes chr2L 1994844 intergenic not near genes chr2L_6_1990001 chr2L_1990001 RAL-894 42 chr2L 2007832 2007873 chr2L 2007960 2008001 10 128 5.5 5.0 5.2 1.6 169 chr2L 2007832 intergenic CR45712 + chr2L 2007916 intergenic CR45712 +,Nplp4 + chr2L 2008001 intergenic CR45712 +,Nplp4 + chr2L_10_2005001 chr2L_2005001 RAL-894 43 chr2L 2031507 2031557 chr2L 2031604 2031662 8 103 0.0 0.0 0.0 8.0 155 chr2L 2031507 intergenic not near genes chr2L 2031584 intergenic not near genes chr2L 2031662 intergenic not near genes chr2L_8_2030001 chr2L_2030001 RAL-894 44 chr2L 2253892 2253907 chr2L 2254073 2254088 5 180 5.0 6.5 5.8 0.7 196 chr2L 2253892 intergenic CG17234 +,Send1 - chr2L 2253990 intergenic CG17234 +,Send1 - chr2L 2254088 intergenic Send1 -,CG17234 + chr2L_5_2250001 chr2L_2250001 RAL-894 45 chr2L 2262296 2262334 chr2L 2262393 2262411 5 86 2.0 0.0 1.0 2.5 115 chr2L 2262296 intergenic not near genes chr2L 2262354 intergenic not near genes chr2L 2262411 intergenic not near genes chr2L_5_2260001 chr2L_2260001 RAL-894 46 chr2L 2311050 2311080 chr2L 2311166 2311183 6 110 1.5 0.0 0.8 3.3 133 chr2L 2311050 intron CG9967 - chr2L 2311116 intron CG9967 - chr2L 2311183 intron CG9967 - chr2L_6_2310001 chr2L_2310001 RAL-894 47 chr2L 2317102 2317132 chr2L 2317293 2317323 4 191 12.5 15.5 14.0 0.3 221 chr2L 2317102 intron,intron CG9967 -,eys + chr2L 2317212 intron,intron CG9967 -,eys + chr2L 2317323 intron,intron CG9967 -,eys + chr2L_4_2315001 chr2L_2315001 RAL-894 48 chr2L 2330861 2330890 chr2L 2330968 2330983 7 106 1.5 2.0 1.8 2.5 122 chr2L 2330861 intron,intron CG9967 -,eys + chr2L 2330922 intron,intron CG9967 -,eys + chr2L 2330983 intron,intron CG9967 -,eys + chr2L_7_2330001 chr2L_2330001 RAL-894 49 chr2L 2355294 2355308 chr2L 2355409 2355419 4 114 9.5 0.0 4.8 0.7 125 chr2L 2355294 intron,intron CG9967 -,eys + chr2L 2355356 intron,intron CG9967 -,eys + chr2L 2355419 intron,intron CG9967 -,eys + chr2L_4_2355001 chr2L_2355001 RAL-894 50 chr2L 2372343 2372402 chr2L 2372449 2372502 10 99 0.0 5.0 2.5 2.9 159 chr2L 2372343 intergenic CG3609 - chr2L 2372422 intergenic CG3609 - chr2L 2372502 3` UTR CG3609 - chr2L_10_2370001 chr2L_2370001 RAL-894 51 chr2L 2427361 2427400 chr2L 2427467 2427506 8 104 4.5 2.0 3.2 1.9 145 chr2L 2427361 3` UTR CR44912 - chr2L 2427434 3` UTR CR44912 - chr2L 2427506 3` UTR CR44912 - chr2L_8_2425001 chr2L_2425001 RAL-894 52 chr2L 2541428 2541477 chr2L 2541531 2541572 7 95 2.0 0.5 1.2 3.2 144 chr2L 2541428 intergenic not near genes chr2L 2541500 intergenic not near genes chr2L 2541572 intergenic not near genes chr2L_7_2540001 chr2L_2540001 RAL-894 53 chr2L 2544541 2544558 chr2L 2544660 2544677 6 119 0.0 8.5 4.2 1.2 136 chr2L 2544541 intergenic not near genes chr2L 2544609 intergenic not near genes chr2L 2544677 intergenic not near genes chr2L_6_2540001 chr2L_2540001 RAL-894 54 chr2L 2552728 2552765 chr2L 2552828 2552865 13 97 1.5 3.0 2.2 4.1 137 chr2L 2552728 exon CG3515 - chr2L 2552796 5` UTR CG3515 - chr2L 2552865 intergenic CG3515 - chr2L_13_2550001 chr2L_2550001 RAL-894 55 chr2L 2565516 2565567 chr2L 2571604 2571634 297 9 6079 3.5 2.5 3.0 2.2 6118 chr2L 2565516 exon Cyp309a2 - chr2L 2568575 intron Cyp309a2 - chr2L 2571634 intron Cyp309a2 - chr2L_9_2565001 chr2L_2565001 RAL-894 56 chr2L 2596052 2596097 chr2L 2596489 2596533 6 437 4.0 4.0 4.0 1.2 481 chr2L 2596052 intergenic not near genes chr2L 2596292 intergenic not near genes chr2L 2596533 intergenic not near genes chr2L_6_2595001 chr2L_2595001 RAL-894 57 chr2L 2667605 2667637 chr2L 2667704 2667725 5 91 3.0 1.5 2.2 1.6 120 chr2L 2667605 intergenic not near genes chr2L 2667665 intergenic not near genes chr2L 2667725 intergenic not near genes chr2L_5_2665001 chr2L_2665001 RAL-894 58 chr2L 2703427 2703440 chr2L 2703530 2703544 5 102 4.0 7.0 5.5 0.8 117 chr2L 2703427 intron CG31690 + chr2L 2703486 intron CG31690 + chr2L 2703544 intron CG31690 + chr2L_5_2700001 chr2L_2700001 RAL-894 59 chr2L 2766655 2766684 chr2L 2766777 2766816 4 129 12.0 22.5 17.2 0.2 161 chr2L 2766655 exon aph-1 + chr2L 2766736 intron aph-1 + chr2L 2766816 exon aph-1 + chr2L_4_2765001 chr2L_2765001 RAL-894 60 chr2L 2772597 2772626 chr2L 2779199 2779205 297 5 6598 5.0 10.5 7.8 0.6 6608 chr2L 2772597 3` UTR Syt1 - chr2L 2775901 intron Syt1 - chr2L 2779205 3` UTR Syt1 - chr2L_5_2775001 chr2L_2775001 RAL-894 61 chr2L 2964288 2964299 chr2L 2964386 2964397 4 98 4.5 1.0 2.8 1.1 109 chr2L 2964288 3` UTR Rbp9 + chr2L 2964342 3` UTR Rbp9 + chr2L 2964397 3` UTR Rbp9 + chr2L_4_2960001 chr2L_2960001 RAL-894 62 chr2L 2975642 2975661 chr2L 2978932 2978971 5 3292 14.5 16.0 15.2 0.3 3329 chr2L 2975642 exon CG9641 - chr2L 2977306 exon CG3165 + chr2L 2978971 exon CG9643 - chr2L_5_2975001 chr2L_2975001 RAL-894 63 chr2L 3072994 3073024 chr2L 3078237 3078267 copia 13 5242 0.5 3.0 1.8 4.6 5273 chr2L 3072994 intron toc - chr2L 3075630 intron toc - chr2L 3078267 intron toc - chr2L_13_3075001 chr2L_3075001 RAL-894 64 chr2L 3125008 3125035 chr2L 3125098 3125109 4 90 2.5 0.5 1.5 1.6 101 chr2L 3125008 intron toc - chr2L 3125058 intron toc - chr2L 3125109 exon toc - chr2L_4_3125001 chr2L_3125001 RAL-894 65 chr2L 3140521 3140547 chr2L 3140613 3140646 7 97 1.5 5.0 3.2 1.7 125 chr2L 3140521 intron toc - chr2L 3140584 intron toc - chr2L 3140646 intron toc - chr2L_7_3140001 chr2L_3140001 RAL-894 66 chr2L 3181285 3181306 chr2L 3181390 3181412 6 106 1.0 4.5 2.8 1.6 127 chr2L 3181285 intron CG34393 - chr2L 3181348 intron CG34393 - chr2L 3181412 intron CG34393 - chr2L_6_3180001 chr2L_3180001 RAL-894 67 chr2L 3189768 3189798 chr2L 3189873 3189903 7 104 2.5 1.5 2.0 2.3 135 chr2L 3189768 intron CG34393 - chr2L 3189836 intron CG34393 - chr2L 3189903 intron CG34393 - chr2L_7_3185001 chr2L_3185001 RAL-894 68 chr2L 3192227 3192242 chr2L 3192321 3192373 8 121 1.0 4.0 2.5 2.3 146 chr2L 3192227 intron CG34393 - chr2L 3192300 intron CG34393 - chr2L 3192373 intron CG34393 - chr2L_8_3190001 chr2L_3190001 RAL-894 69 chr2L 3251474 3251517 chr2L 3259059 3259102 springer 7 7583 6.0 5.0 5.5 1.1 7628 chr2L 3251474 intergenic not near genes chr2L 3255288 intergenic not near genes chr2L 3259102 intergenic not near genes chr2L_7_3255001 chr2L_3255001 RAL-894 70 chr2L 3291216 3291258 chr2L 3291316 3291358 15 97 6.0 2.0 4.0 3.0 142 chr2L 3291216 intergenic CG9664 - chr2L 3291287 3` UTR CG9664 - chr2L 3291358 3` UTR CG9664 - chr2L_15_3290001 chr2L_3290001 RAL-894 71 chr2L 3367004 3367037 chr2L 3367162 3367190 7 164 2.5 2.0 2.2 2.2 186 chr2L 3367004 intron CG34394 - chr2L 3367097 intron CG34394 - chr2L 3367190 intron CG34394 - chr2L_7_3365001 chr2L_3365001 RAL-894 72 chr2L 3388580 3388621 chr2L 3388841 3388882 pogo 17 259 3.5 3.0 3.2 4.0 302 chr2L 3388580 intergenic CG42460 - chr2L 3388731 intergenic CG42460 - chr2L 3388882 intergenic CG42460 -,CR44791 + chr2L_17_3385001 chr2L_3385001 RAL-894 73 chr2L 3426407 3426432 chr2L 3426522 3426558 9 127 2.5 4.5 3.5 2.0 151 chr2L 3426407 intron pgant2 - chr2L 3426482 intron pgant2 - chr2L 3426558 5` UTR pgant2 - chr2L_9_3425001 chr2L_3425001 RAL-894 74 chr2L 3480480 3480485 chr2L 3480578 3480584 4 99 3.0 0.5 1.8 1.4 104 chr2L 3480480 intergenic CG15414 - chr2L 3480532 intergenic CG15414 - chr2L 3480584 intergenic CG15414 - chr2L_4_3480001 chr2L_3480001 RAL-894 75 chr2L 3498701 3498747 chr2L 3498798 3498844 6 97 1.5 1.5 1.5 2.4 143 chr2L 3498701 intron tim - chr2L 3498772 intron tim - chr2L 3498844 intron tim - chr2L_6_3495001 chr2L_3495001 RAL-894 76 chr2L 3510378 3510411 chr2L 3510480 3510513 7 100 4.5 4.5 4.5 1.3 135 chr2L 3510378 3` UTR CG33123 - chr2L 3510446 3` UTR CG33123 - chr2L 3510513 3` UTR CG33123 - chr2L_7_3510001 chr2L_3510001 RAL-894 77 chr2L 3592073 3592095 chr2L 3592151 3592188 6 93 1.5 3.0 2.2 1.9 115 chr2L 3592073 intergenic not near genes chr2L 3592130 intergenic not near genes chr2L 3592188 intergenic not near genes chr2L_6_3590001 chr2L_3590001 RAL-894 78 chr2L 3616573 3616581 chr2L 3616670 3616678 4 96 0.0 4.0 2.0 1.3 105 chr2L 3616573 5` UTR CR44310 + chr2L 3616626 5` UTR CR44310 + chr2L 3616678 5` UTR CR44310 + chr2L_4_3615001 chr2L_3615001 RAL-894 79 chr2L 3649772 3649812 chr2L 3654994 3655024 copia 18 5220 3.5 5.0 4.2 3.5 5252 chr2L 3649772 intron for - chr2L 3652398 intron for - chr2L 3655024 intron for - chr2L_18_3650001 chr2L_3650001 RAL-894 80 chr2L 3663290 3663329 chr2L 3663389 3663428 10 94 5.5 4.5 5.0 1.7 138 chr2L 3663290 5` UTR CG34340 + chr2L 3663359 intron CG34340 + chr2L 3663428 intron CG34340 + chr2L_10_3660001 chr2L_3660001 RAL-894 81 chr2L 3673859 3673899 chr2L 3673980 3674020 13 120 4.0 1.5 2.8 3.4 161 chr2L 3673859 intron CG34340 + chr2L 3673940 intron CG34340 + chr2L 3674020 intron CG34340 + chr2L_13_3670001 chr2L_3670001 RAL-894 82 chr2L 3686363 3686400 chr2L 3686463 3686498 8 105 3.0 1.5 2.2 2.5 135 chr2L 3686363 intron CG34340 + chr2L 3686430 intron CG34340 + chr2L 3686498 intron CG34340 + chr2L_8_3685001 chr2L_3685001 RAL-894 83 chr2L 3690623 3690646 chr2L 3690737 3690743 9 118 3.5 0.5 2.0 3.0 120 chr2L 3690623 intron CG34340 + chr2L 3690683 intron CG34340 + chr2L 3690743 intron CG34340 + chr2L_9_3690001 chr2L_3690001 RAL-894 84 chr2L 3700981 3700989 chr2L 3701086 3701094 4 105 7.0 0.0 3.5 0.9 113 chr2L 3700981 exon Sfp24C1 + chr2L 3701038 3` UTR Sfp24C1 + chr2L 3701094 intergenic Sfp24C1 +,CG42467 +,CG42465 + chr2L_4_3700001 chr2L_3700001 RAL-894 85 chr2L 3785625 3785636 chr2L 3786373 3786379 4 750 2.5 16.0 9.2 0.4 754 chr2L 3785625 intergenic CG31960 +,CG31958 + chr2L 3786002 exon CG31958 + chr2L 3786379 intergenic CG31958 + chr2L_4_3785001 chr2L_3785001 RAL-894 86 chr2L 3819012 3819046 chr2L 3819113 3819148 6 99 1.5 0.0 0.8 3.3 136 chr2L 3819012 intergenic CR44077 + chr2L 3819080 intergenic not near genes chr2L 3819148 intergenic not near genes chr2L_6_3815001 chr2L_3815001 RAL-894 87 chr2L 3819611 3819630 chr2L 3819702 3819726 9 94 1.0 4.5 2.8 2.4 115 chr2L 3819611 intergenic not near genes chr2L 3819668 intergenic not near genes chr2L 3819726 intergenic not near genes chr2L_9_3815001 chr2L_3815001 RAL-894 88 chr2L 3881761 3881793 chr2L 3881867 3881898 8 100 3.5 6.0 4.8 1.4 137 chr2L 3881761 intron capu - chr2L 3881830 intron capu - chr2L 3881898 intron capu - chr2L_8_3880001 chr2L_3880001 RAL-894 89 chr2L 3895323 3895349 chr2L 3895432 3895458 6 109 5.5 2.5 4.0 1.2 135 chr2L 3895323 intron capu - chr2L 3895390 intron capu - chr2L 3895458 intron capu - chr2L_6_3895001 chr2L_3895001 RAL-894 90 chr2L 3935895 3935947 chr2L 3936004 3936041 10 102 3.5 6.5 5.0 1.7 146 chr2L 3935895 intron fred - chr2L 3935968 intron fred - chr2L 3936041 intron fred - chr2L_10_3935001 chr2L_3935001 RAL-894 91 chr2L 3943775 3943826 chr2L 3943886 3943937 14 107 4.0 5.0 4.5 2.5 162 chr2L 3943775 intron fred - chr2L 3943856 intron fred - chr2L 3943937 intron fred - chr2L_14_3940001 chr2L_3940001 RAL-894 92 chr2L 3967206 3967249 chr2L 3967314 3967357 16 108 2.5 3.5 3.0 4.0 151 chr2L 3967206 intron fred - chr2L 3967282 intron fred - chr2L 3967357 intron fred - chr2L_16_3965001 chr2L_3965001 RAL-894 93 chr2L 3985959 3985984 chr2L 3986057 3986081 7 96 2.0 5.5 3.8 1.5 122 chr2L 3985959 intron fred - chr2L 3986020 intron fred - chr2L 3986081 intron fred - chr2L_7_3985001 chr2L_3985001 RAL-894 94 chr2L 3992478 3992521 chr2L 3992661 3992699 5 181 1.5 2.0 1.8 1.8 221 chr2L 3992478 intergenic not near genes chr2L 3992588 intergenic not near genes chr2L 3992699 intergenic not near genes chr2L_5_3990001 chr2L_3990001 RAL-894 95 chr2L 4001636 4001686 chr2L 4001755 4001804 7 116 4.5 3.5 4.0 1.4 168 chr2L 4001636 intergenic CR45344 + chr2L 4001720 intergenic CR45344 + chr2L 4001804 intergenic CR45344 + chr2L_7_4000001 chr2L_4000001 RAL-894 96 chr2L 4008251 4008301 chr2L 4008351 4008386 18 102 3.5 1.5 2.5 5.1 135 chr2L 4008251 intergenic CG43773 +,CG43774 + chr2L 4008318 intergenic CG43773 +,CG43774 + chr2L 4008386 intergenic CG43774 +,CG43773 + chr2L_18_4005001 chr2L_4005001 RAL-894 97 chr2L 4037780 4037799 chr2L 4037887 4037906 8 106 5.0 3.5 4.2 1.5 126 chr2L 4037780 intron ed + chr2L 4037843 intron ed + chr2L 4037906 intron ed + chr2L_8_4035001 chr2L_4035001 RAL-894 98 chr2L 4060163 4060198 chr2L 4060254 4060294 7 91 2.5 3.5 3.0 1.8 131 chr2L 4060163 intron ed + chr2L 4060228 intron ed + chr2L 4060294 intron ed + chr2L_7_4060001 chr2L_4060001 RAL-894 99 chr2L 4066024 4066048 chr2L 4068869 4068881 Juan 7 2836 0.5 2.0 1.2 3.2 2857 chr2L 4066024 intron ed + chr2L 4067452 intron ed + chr2L 4068881 intron ed + chr2L_7_4065001 chr2L_4065001 RAL-894 100 chr2L 4119952 4119954 chr2L 4120059 4120061 5 107 6.0 3.0 4.5 0.9 109 chr2L 4119952 intergenic Sr-CIII + chr2L 4120006 intergenic Sr-CIII + chr2L 4120061 intergenic Sr-CIII + chr2L_5_4120001 chr2L_4120001 RAL-894 101 chr2L 4124263 4124356 chr2L 4124363 4124469 5 119 0.0 0.0 0.0 5.0 206 chr2L 4124263 intergenic Sr-CI + chr2L 4124366 intergenic Sr-CI + chr2L 4124469 intergenic Sr-CI + chr2L_5_4120001 chr2L_4120001 RAL-894 102 chr2L 4166370 4166409 chr2L 4166468 4166512 8 101 1.0 7.0 4.0 1.6 142 chr2L 4166370 intergenic Or24a - chr2L 4166441 intergenic Or24a - chr2L 4166512 intergenic Or24a - chr2L_8_4165001 chr2L_4165001 RAL-894 103 chr2L 4170951 4170957 chr2L 4171115 4171146 5 175 3.5 1.0 2.2 1.6 195 chr2L 4170951 intergenic not near genes chr2L 4171048 intergenic not near genes chr2L 4171146 intergenic not near genes chr2L_5_4170001 chr2L_4170001 RAL-894 104 chr2L 4180107 4180123 chr2L 4180203 4180208 4 93 1.5 1.5 1.5 1.6 101 chr2L 4180107 intergenic not near genes chr2L 4180158 intergenic not near genes chr2L 4180208 intergenic not near genes chr2L_4_4180001 chr2L_4180001 RAL-894 105 chr2L 4184460 4184507 chr2L 4184799 4184846 7 339 0.0 2.5 1.2 3.2 386 chr2L 4184460 intergenic not near genes chr2L 4184653 intergenic not near genes chr2L 4184846 intergenic not near genes chr2L_7_4180001 chr2L_4180001 RAL-894 106 chr2L 4218328 4218351 chr2L 4218420 4218449 7 92 1.5 0.0 0.8 3.9 121 chr2L 4218328 intron ft - chr2L 4218388 intron ft - chr2L 4218449 intron ft - chr2L_7_4215001 chr2L_4215001 RAL-894 107 chr2L 4222176 4222212 chr2L 4222283 4222319 11 106 3.5 4.0 3.8 2.3 143 chr2L 4222176 intergenic ft - chr2L 4222248 intergenic ft - chr2L 4222319 intergenic not near genes chr2L_11_4220001 chr2L_4220001 RAL-894 108 chr2L 4317876 4317908 chr2L 4317972 4318006 9 93 2.0 5.0 3.5 2.0 130 chr2L 4317876 intron tutl + chr2L 4317941 intron tutl + chr2L 4318006 intron tutl + chr2L_9_4315001 chr2L_4315001 RAL-894 109 chr2L 4438982 4439018 chr2L 4439088 4439124 11 100 4.5 2.0 3.2 2.6 142 chr2L 4438982 intron CG15431 - chr2L 4439053 intron CG15431 - chr2L 4439124 5` UTR CG15431 - chr2L_11_4435001 chr2L_4435001 RAL-894 110 chr2L 4477138 4477170 chr2L 4477311 4477351 11 180 13.0 15.5 14.2 0.7 213 chr2L 4477138 intergenic ine -,dp - chr2L 4477244 intergenic dp -,ine - chr2L 4477351 intergenic dp -,ine - chr2L_11_4475001 chr2L_4475001 RAL-894 111 chr2L 4487229 4487266 chr2L 4487349 4487385 4 120 3.5 6.0 4.8 0.7 156 chr2L 4487229 intron dp - chr2L 4487307 intron dp - chr2L 4487385 intron dp - chr2L_4_4485001 chr2L_4485001 RAL-894 112 chr2L 4562870 4562877 chr2L 4562961 4562989 5 108 4.0 0.0 2.0 1.7 119 chr2L 4562870 intron dp - chr2L 4562930 intron dp - chr2L 4562989 intron dp - chr2L_5_4560001 chr2L_4560001 RAL-894 113 chr2L 4595843 4595893 chr2L 4595953 4596003 8 107 3.5 0.0 1.8 2.9 160 chr2L 4595843 intron dp - chr2L 4595923 intron dp - chr2L 4596003 intron dp - chr2L_8_4595001 chr2L_4595001 RAL-894 114 chr2L 4601694 4601736 chr2L 4609143 4609161 mdg1 9 7452 4.0 2.5 3.2 2.1 7467 chr2L 4601694 intron dp - chr2L 4605428 intron dp - chr2L 4609161 intron dp - chr2L_9_4605001 chr2L_4605001 RAL-894 115 chr2L 4672077 4672109 chr2L 4672163 4672206 10 94 0.0 3.5 1.8 3.6 129 chr2L 4672077 intergenic not near genes chr2L 4672142 intergenic not near genes chr2L 4672206 intergenic not near genes chr2L_10_4670001 chr2L_4670001 RAL-894 116 chr2L 4693392 4693408 chr2L 4693579 4693595 6 187 3.0 1.0 2.0 2.0 203 chr2L 4693392 intergenic not near genes chr2L 4693494 intergenic not near genes chr2L 4693595 intergenic not near genes chr2L_6_4690001 chr2L_4690001 RAL-894 117 chr2L 4770089 4770135 chr2L 4770191 4770236 11 92 3.0 1.5 2.2 3.4 147 chr2L 4770089 intron CG15630 - chr2L 4770162 intron CG15630 - chr2L 4770236 intron CG15630 - chr2L_11_4770001 chr2L_4770001 RAL-894 118 chr2L 4777083 4777104 chr2L 4777185 4777186 5 96 6.5 4.5 5.5 0.8 103 chr2L 4777083 intron CG15630 - chr2L 4777134 intron CG15630 - chr2L 4777186 intron CG15630 - chr2L_5_4775001 chr2L_4775001 RAL-894 119 chr2L 4855295 4855323 chr2L 4855383 4855402 5 88 4.5 2.5 3.5 1.1 107 chr2L 4855295 intron pog + chr2L 4855348 intron pog + chr2L 4855402 intron pog + chr2L_5_4855001 chr2L_4855001 RAL-894 120 chr2L 4858452 4858480 chr2L 4858571 4858599 7 118 3.0 7.0 5.0 1.2 147 chr2L 4858452 intron pog + chr2L 4858526 intron pog + chr2L 4858599 intron pog + chr2L_7_4855001 chr2L_4855001 RAL-894 121 chr2L 4918165 4918202 chr2L 4923253 4923333 jockey 4 5120 0.0 0.5 0.2 3.3 5168 chr2L 4918165 intron hoe1 - chr2L 4920749 intron hoe1 - chr2L 4923333 intron hoe1 - chr2L_4_4920001 chr2L_4920001 RAL-894 122 chr2L 4923235 4923247 chr2L 4923346 4923358 6 108 0.0 4.0 2.0 2.0 123 chr2L 4923235 intron hoe1 - chr2L 4923296 intron hoe1 - chr2L 4923358 intron hoe1 - chr2L_6_4920001 chr2L_4920001 RAL-894 123 chr2L 4923248 4923255 chr2L 4923324 4923360 5 101 0.0 3.5 1.8 1.8 112 chr2L 4923248 intron hoe1 - chr2L 4923304 intron hoe1 - chr2L 4923360 intron hoe1 - chr2L_5_4920001 chr2L_4920001 RAL-894 124 chr2L 4953496 4953528 chr2L 4953757 4953779 pogo 11 258 5.5 3.5 4.5 2.0 283 chr2L 4953496 intergenic Jon25Bii - chr2L 4953638 intergenic not near genes chr2L 4953779 intergenic Jon25Bi - chr2L_11_4950001 chr2L_4950001 RAL-894 125 chr2L 4996077 4996112 chr2L 4996168 4996209 8 96 4.0 3.5 3.8 1.7 132 chr2L 4996077 intron Rtnl1 - chr2L 4996143 intron Rtnl1 - chr2L 4996209 intron Rtnl1 - chr2L_8_4995001 chr2L_4995001 RAL-894 126 chr2L 4998125 4998144 chr2L 4998226 4998263 7 115 6.0 8.0 7.0 0.9 138 chr2L 4998125 intron Rtnl1 - chr2L 4998194 intron Rtnl1 - chr2L 4998263 intron Rtnl1 - chr2L_7_4995001 chr2L_4995001 RAL-894 127 chr2L 5092425 5092444 chr2L 5092517 5092551 9 105 0.0 7.0 3.5 2.0 126 chr2L 5092425 intron pgant5 - chr2L 5092488 intron pgant5 - chr2L 5092551 intron pgant5 - chr2L_9_5090001 chr2L_5090001 RAL-894 128 chr2L 5120953 5121004 chr2L 5121067 5121118 6 105 3.5 3.0 3.2 1.4 165 chr2L 5120953 intron Msp300 + chr2L 5121036 intron Msp300 + chr2L 5121118 intron Msp300 + chr2L_6_5120001 chr2L_5120001 RAL-894 129 chr2L 5149285 5149330 chr2L 5149393 5149431 8 105 3.0 5.0 4.0 1.6 146 chr2L 5149285 intron Msp300 + chr2L 5149358 intron Msp300 + chr2L 5149431 intron Msp300 + chr2L_8_5145001 chr2L_5145001 RAL-894 130 chr2L 5240985 5241005 chr2L 5241086 5241086 5 97 0.5 0.5 0.5 3.3 101 chr2L 5240985 intron tkv - chr2L 5241036 intron tkv - chr2L 5241086 intron tkv - chr2L_5_5240001 chr2L_5240001 RAL-894 131 chr2L 5276704 5276732 chr2L 5276804 5276836 8 101 0.0 4.5 2.2 2.5 132 chr2L 5276704 exon Bsg25D - chr2L 5276770 intron Bsg25D - chr2L 5276836 intron Bsg25D - chr2L_8_5275001 chr2L_5275001 RAL-894 132 chr2L 5339023 5339070 chr2L 5339127 5339173 7 103 4.0 0.0 2.0 2.3 150 chr2L 5339023 intergenic CG12512 - chr2L 5339098 intergenic CG12512 - chr2L 5339173 3` UTR CG12512 - chr2L_7_5335001 chr2L_5335001 RAL-894 133 chr2L 5475130 5475161 chr2L 5475255 5475286 7 121 1.0 1.5 1.2 3.2 156 chr2L 5475130 intergenic not near genes chr2L 5475208 intergenic not near genes chr2L 5475286 intergenic not near genes chr2L_7_5475001 chr2L_5475001 RAL-894 134 chr2L 5500041 5500075 chr2L 5500147 5500181 8 106 3.0 1.0 2.0 2.7 140 chr2L 5500041 intergenic not near genes chr2L 5500111 intergenic not near genes chr2L 5500181 intergenic not near genes chr2L_8_5500001 chr2L_5500001 RAL-894 135 chr2L 5516649 5516687 chr2L 5516736 5516786 16 98 4.0 2.0 3.0 4.0 137 chr2L 5516649 intergenic not near genes chr2L 5516718 intergenic not near genes chr2L 5516786 intergenic not near genes chr2L_16_5515001 chr2L_5515001 RAL-894 136 chr2L 5543768 5543794 chr2L 5543899 5543927 6 132 4.0 4.0 4.0 1.2 159 chr2L 5543768 exon Lam + chr2L 5543848 intron Lam + chr2L 5543927 intron Lam + chr2L_6_5540001 chr2L_5540001 RAL-894 137 chr2L 5668581 5668611 chr2L 5668679 5668694 6 94 1.5 4.0 2.8 1.6 113 chr2L 5668581 intron Hsp60C + chr2L 5668638 intron Hsp60C + chr2L 5668694 intron Hsp60C + chr2L_6_5665001 chr2L_5665001 RAL-894 138 chr2L 5784930 5784985 chr2L 5785033 5785050 14 97 2.0 3.5 2.8 3.7 120 chr2L 5784930 intron CG9171 - chr2L 5784990 intron CG9171 - chr2L 5785050 intron CG9171 - chr2L_14_5780001 chr2L_5780001 RAL-894 139 chr2L 5822480 5822495 chr2L 5824009 5824034 4 1535 6.5 1.0 3.8 0.8 1554 chr2L 5822480 intergenic not near genes chr2L 5823257 intergenic not near genes chr2L 5824034 5` UTR TrissinR + chr2L_4_5820001 chr2L_5820001 RAL-894 140 chr2L 5827724 5827741 chr2L 5836721 5836769 roo 6 9009 3.5 3.0 3.2 1.4 9045 chr2L 5827724 intron TrissinR + chr2L 5832246 intron TrissinR + chr2L 5836769 intron TrissinR + chr2L_6_5830001 chr2L_5830001 RAL-894 141 chr2L 5839071 5839125 chr2L 5839171 5839200 6 90 2.0 0.0 1.0 3.0 129 chr2L 5839071 intron TrissinR + chr2L 5839136 intron TrissinR + chr2L 5839200 intron TrissinR + chr2L_6_5835001 chr2L_5835001 RAL-894 142 chr2L 5976921 5976966 chr2L 5977027 5977072 8 106 1.0 2.0 1.5 3.2 151 chr2L 5976921 intron chic - chr2L 5976996 intron chic - chr2L 5977072 intron chic - chr2L_8_5975001 chr2L_5975001 RAL-894 143 chr2L 5989015 5989057 chr2L 5989111 5989143 14 91 4.5 1.0 2.8 3.7 128 chr2L 5989015 intergenic ifc +,lid - chr2L 5989079 intergenic ifc +,lid - chr2L 5989143 intergenic lid -,ifc + chr2L_14_5985001 chr2L_5985001 RAL-894 144 chr2L 6103197 6103249 chr2L 6103295 6103339 5 90 1.5 3.5 2.5 1.4 142 chr2L 6103197 intron stai + chr2L 6103268 intron stai + chr2L 6103339 intron stai + chr2L_5_6100001 chr2L_6100001 RAL-894 145 chr2L 6106226 6106244 chr2L 6106329 6106347 10 100 4.0 1.5 2.8 2.6 121 chr2L 6106226 intron stai + chr2L 6106286 intron stai + chr2L 6106347 intron stai + chr2L_10_6105001 chr2L_6105001 RAL-894 146 chr2L 6138716 6138743 chr2L 6138852 6138879 5 136 1.5 0.0 0.8 2.8 163 chr2L 6138716 intergenic CR44824 - chr2L 6138798 intergenic CR44824 - chr2L 6138879 3` UTR CR44824 - chr2L_5_6135001 chr2L_6135001 RAL-894 147 chr2L 6173851 6173868 chr2L 6173947 6173964 5 96 6.5 5.0 5.8 0.7 113 chr2L 6173851 intergenic not near genes chr2L 6173908 intergenic not near genes chr2L 6173964 intergenic not near genes chr2L_5_6170001 chr2L_6170001 RAL-894 148 chr2L 6242859 6242879 chr2L 6242957 6242983 4 102 3.0 0.0 1.5 1.6 124 chr2L 6242859 intergenic not near genes chr2L 6242921 intergenic not near genes chr2L 6242983 intergenic not near genes chr2L_4_6240001 chr2L_6240001 RAL-894 149 chr2L 6318714 6318762 chr2L 6318888 6318936 11 173 3.5 4.0 3.8 2.3 222 chr2L 6318714 intron Ddr + chr2L 6318825 intron Ddr + chr2L 6318936 intron Ddr + chr2L_11_6315001 chr2L_6315001 RAL-894 150 chr2L 6349060 6349072 chr2L 6349158 6349167 6 98 2.5 1.5 2.0 2.0 107 chr2L 6349060 intergenic CG9498 - chr2L 6349114 intergenic CG9498 - chr2L 6349167 intergenic CG9498 - chr2L_6_6345001 chr2L_6345001 RAL-894 151 chr2L 6414726 6414767 chr2L 6414824 6414867 10 100 1.0 1.0 1.0 5.0 141 chr2L 6414726 3` UTR CG13982 + chr2L 6414796 3` UTR CG13982 + chr2L 6414867 3` UTR CG13982 + chr2L_10_6410001 chr2L_6410001 RAL-894 152 chr2L 6426841 6426882 chr2L 6445121 6445162 roo 6 18275 3.5 3.5 3.5 1.3 18321 chr2L 6426841 3` UTR CG9527 - chr2L 6436002 intron CG9527 - chr2L 6445162 exon CG9527 - chr2L_6_6435001 chr2L_6435001 RAL-894 153 chr2L 6537123 6537165 chr2L 6537220 6537263 11 95 2.0 2.0 2.0 3.7 140 chr2L 6537123 intron eya - chr2L 6537193 intron eya - chr2L 6537263 intron eya - chr2L_11_6535001 chr2L_6535001 RAL-894 154 chr2L 6564828 6564880 chr2L 6564941 6564992 6 109 4.5 0.5 2.5 1.7 164 chr2L 6564828 3` UTR CG13766 - chr2L 6564910 3` UTR CG13766 - chr2L 6564992 3` UTR CG13766 - chr2L_6_6560001 chr2L_6560001 RAL-894 155 chr2L 6605582 6605628 chr2L 6605683 6605729 16 100 7.5 3.0 5.2 2.6 147 chr2L 6605582 intergenic not near genes chr2L 6605656 intergenic not near genes chr2L 6605729 intergenic not near genes chr2L_16_6605001 chr2L_6605001 RAL-894 156 chr2L 6612006 6612041 chr2L 6612306 6612347 8 302 23.5 31.5 27.5 0.3 341 chr2L 6612006 intron CG11050 + chr2L 6612176 intron CG11050 + chr2L 6612347 intron CG11050 + chr2L_8_6610001 chr2L_6610001 RAL-894 157 chr2L 6799576 6799621 chr2L 6799680 6799731 11 109 3.5 5.0 4.2 2.1 155 chr2L 6799576 5` UTR CR43610 + chr2L 6799654 intergenic CR43610 +,CG17376 - chr2L 6799731 intergenic CR43610 +,CG17376 - chr2L_11_6795001 chr2L_6795001 RAL-894 158 chr2L 6850376 6850418 chr2L 6850502 6850543 7 126 6.0 1.5 3.8 1.5 167 chr2L 6850376 intergenic not near genes chr2L 6850460 intergenic not near genes chr2L 6850543 intergenic not near genes chr2L_7_6850001 chr2L_6850001 RAL-894 159 chr2L 6876784 6876808 chr2L 6882974 6883019 diver 4 6197 3.5 3.5 3.5 0.9 6235 chr2L 6876784 intron Nlg2 + chr2L 6879902 intron Nlg2 + chr2L 6883019 intron Nlg2 + chr2L_4_6875001 chr2L_6875001 RAL-894 160 chr2L 6883726 6883774 chr2L 6883832 6883873 7 101 5.5 2.5 4.0 1.4 147 chr2L 6883726 intron Nlg2 + chr2L 6883800 intron Nlg2 + chr2L 6883873 intron Nlg2 + chr2L_7_6880001 chr2L_6880001 RAL-894 161 chr2L 6887478 6887484 chr2L 6887648 6887654 5 170 7.5 0.0 3.8 1.0 176 chr2L 6887478 intron Nlg2 + chr2L 6887566 intron Nlg2 + chr2L 6887654 intron Nlg2 + chr2L_5_6885001 chr2L_6885001 RAL-894 162 chr2L 6991411 6991436 chr2L 6998552 6998577 HMS-Beagle 4 7138 3.5 2.5 3.0 1.0 7166 chr2L 6991411 intron uif - chr2L 6994994 intron uif - chr2L 6998577 intron uif - chr2L_4_6990001 chr2L_6990001 RAL-894 163 chr2L 7025905 7025935 chr2L 7026010 7026040 7 104 1.5 3.5 2.5 2.0 135 chr2L 7025905 intron CG31908 - chr2L 7025972 intron CG31908 - chr2L 7026040 intron CG31908 - chr2L_7_7025001 chr2L_7025001 RAL-894 164 chr2L 7125772 7125806 chr2L 7125908 7125942 5 132 5.0 1.5 3.2 1.2 170 chr2L 7125772 intron Pvf3 - chr2L 7125857 intron Pvf3 - chr2L 7125942 intron Pvf3 - chr2L_5_7125001 chr2L_7125001 RAL-894 165 chr2L 7143141 7143182 chr2L 7143242 7143283 14 101 0.5 5.0 2.8 3.7 142 chr2L 7143141 intron,5` UTR Pvf3 -,CR44612 + chr2L 7143212 intron,5` UTR Pvf3 -,CR44612 + chr2L 7143283 intron,5` UTR Pvf3 -,CR44612 + chr2L_14_7140001 chr2L_7140001 RAL-894 166 chr2L 7149977 7149986 chr2L 7150090 7150106 4 118 12.0 2.0 7.0 0.5 129 chr2L 7149977 intron Pvf3 - chr2L 7150042 intron Pvf3 - chr2L 7150106 intron Pvf3 - chr2L_4_7150001 chr2L_7150001 RAL-894 167 chr2L 7152178 7152197 chr2L 7152280 7152297 4 98 3.5 2.0 2.8 1.1 119 chr2L 7152178 intron Pvf3 - chr2L 7152238 intron Pvf3 - chr2L 7152297 intron Pvf3 - chr2L_4_7150001 chr2L_7150001 RAL-894 168 chr2L 7164548 7164588 chr2L 7164686 7164716 12 132 2.5 4.5 3.5 2.7 168 chr2L 7164548 intergenic not near genes chr2L 7164632 intergenic not near genes chr2L 7164716 intergenic not near genes chr2L_12_7160001 chr2L_7160001 RAL-894 169 chr2L 7200996 7201033 chr2L 7201080 7201134 13 93 3.0 1.0 2.0 4.3 138 chr2L 7200996 intron CG4502 - chr2L 7201065 intron CG4502 - chr2L 7201134 intron CG4502 - chr2L_13_7200001 chr2L_7200001 RAL-894 170 chr2L 7216460 7216467 chr2L 7216557 7216564 5 97 6.0 3.5 4.8 0.9 104 chr2L 7216460 intron CG13784 - chr2L 7216512 intron CG13784 - chr2L 7216564 intron CG13784 - chr2L_5_7215001 chr2L_7215001 RAL-894 171 chr2L 7216468 7216479 chr2L 7216554 7216568 4 90 6.0 3.5 4.8 0.7 100 chr2L 7216468 intron CG13784 - chr2L 7216518 intron CG13784 - chr2L 7216568 intron CG13784 - chr2L_4_7215001 chr2L_7215001 RAL-894 172 chr2L 7247095 7247116 chr2L 7247215 7247225 11 121 4.5 0.0 2.2 3.4 130 chr2L 7247095 intron Ndae1 - chr2L 7247160 intron Ndae1 - chr2L 7247225 intron Ndae1 - chr2L_11_7245001 chr2L_7245001 RAL-894 173 chr2L 7296004 7296025 chr2L 7296161 7296183 8 159 1.0 4.5 2.8 2.1 179 chr2L 7296004 intergenic not near genes chr2L 7296094 intergenic not near genes chr2L 7296183 intergenic not near genes chr2L_8_7295001 chr2L_7295001 RAL-894 174 chr2L 7335232 7335275 chr2L 7335349 7335377 5 105 1.5 0.5 1.0 2.5 145 chr2L 7335232 intron Wnt6 + chr2L 7335304 intron Wnt6 + chr2L 7335377 intron Wnt6 + chr2L_5_7335001 chr2L_7335001 RAL-894 175 chr2L 7363504 7363554 chr2L 7363600 7363652 11 98 1.5 0.0 0.8 6.1 148 chr2L 7363504 5` UTR Wnt10 + chr2L 7363578 5` UTR Wnt10 + chr2L 7363652 5` UTR Wnt10 + chr2L_11_7360001 chr2L_7360001 RAL-894 176 chr2L 7376129 7376155 chr2L 7376293 7376293 5 154 0.0 4.0 2.0 1.7 164 chr2L 7376129 intron Wnt10 + chr2L 7376211 intron Wnt10 + chr2L 7376293 intron Wnt10 + chr2L_5_7375001 chr2L_7375001 RAL-894 177 chr2L 7454652 7454664 chr2L 7454786 7454798 5 134 4.5 4.0 4.2 1.0 146 chr2L 7454652 intergenic Gr28b -,Gr28a - chr2L 7454725 intergenic Gr28b - chr2L 7454798 intergenic Gr28b - chr2L_5_7450001 chr2L_7450001 RAL-894 178 chr2L 7508335 7508387 chr2L 7508436 7508452 16 96 2.0 4.0 3.0 4.0 117 chr2L 7508335 intron RapGAP1 - chr2L 7508394 intron RapGAP1 - chr2L 7508452 intron RapGAP1 - chr2L_16_7505001 chr2L_7505001 RAL-894 179 chr2L 7512908 7512922 chr2L 7512994 7513003 6 86 0.5 0.0 0.2 5.0 95 chr2L 7512908 intron RapGAP1 - chr2L 7512956 intron RapGAP1 - chr2L 7513003 intron RapGAP1 - chr2L_6_7510001 chr2L_7510001 RAL-894 180 chr2L 7555196 7555234 chr2L 7555293 7555325 7 93 0.5 5.0 2.8 1.8 129 chr2L 7555196 intron RapGAP1 - chr2L 7555260 intron RapGAP1 - chr2L 7555325 intron RapGAP1 - chr2L_7_7555001 chr2L_7555001 RAL-894 181 chr2L 7579177 7579206 chr2L 7579381 7579411 BS 12 203 7.0 0.0 3.5 2.7 234 chr2L 7579177 intergenic RapGAP1 - chr2L 7579294 intergenic RapGAP1 - chr2L 7579411 intergenic RapGAP1 - chr2L_12_7575001 chr2L_7575001 RAL-894 182 chr2L 7594371 7594373 chr2L 9067796 9067798 4 1473425 0.5 16.0 8.2 0.4 1473427 chr2L 7594371 intergenic not near genes chr2L 8331084 intron CG14275 + chr2L 9067798 intron CG31708 - chr2L_4_8330001 chr2L_8330001 RAL-894 183 chr2L 7779403 7779415 chr2L 7779547 7779559 5 144 0.0 3.0 1.5 2.0 156 chr2L 7779403 intergenic not near genes chr2L 7779481 intergenic not near genes chr2L 7779559 intergenic not near genes chr2L_5_7775001 chr2L_7775001 RAL-894 184 chr2L 7839526 7839577 chr2L 7839636 7839698 5 116 4.0 0.0 2.0 1.7 172 chr2L 7839526 intergenic not near genes chr2L 7839612 intergenic not near genes chr2L 7839698 intergenic not near genes chr2L_5_7835001 chr2L_7835001 RAL-894 185 chr2L 7867560 7867593 chr2L 7867660 7867707 19 111 4.0 4.5 4.2 3.7 147 chr2L 7867560 intron Proc - chr2L 7867634 intron Proc - chr2L 7867707 intron Proc - chr2L_19_7865001 chr2L_7865001 RAL-894 186 chr2L 7922721 7922766 chr2L 7922822 7922827 17 93 4.5 4.0 4.2 3.3 106 chr2L 7922721 intron Snoo - chr2L 7922774 intron Snoo - chr2L 7922827 intron Snoo - chr2L_17_7920001 chr2L_7920001 RAL-894 187 chr2L 7959029 7959071 chr2L 7960460 7960483 pogo 12 1426 4.5 6.5 5.5 1.8 1454 chr2L 7959029 intron Snoo - chr2L 7959756 intron Snoo - chr2L 7960483 intron Snoo - chr2L_12_7955001 chr2L_7955001 RAL-894 188 chr2L 7977071 7977108 chr2L 7984066 7984101 297 8 6987 3.0 3.0 3.0 2.0 7030 chr2L 7977071 intron Snoo - chr2L 7980586 intron Snoo - chr2L 7984101 intron,5` UTR Snoo -,CG7231 + chr2L_8_7980001 chr2L_7980001 RAL-894 189 chr2L 7998550 7998568 chr2L 7998648 7998666 6 98 4.0 5.5 4.8 1.0 116 chr2L 7998550 intergenic Sirup + chr2L 7998608 intergenic Sirup + chr2L 7998666 intergenic Sirup + chr2L_6_7995001 chr2L_7995001 RAL-894 190 chr2L 8003049 8003063 chr2L 8003141 8003165 7 96 0.0 11.0 5.5 1.1 116 chr2L 8003049 intron Wwox - chr2L 8003107 intron Wwox - chr2L 8003165 intron Wwox - chr2L_7_8000001 chr2L_8000001 RAL-894 191 chr2L 8013594 8013609 chr2L 8018817 8018830 copia 5 5221 7.0 0.0 3.5 1.1 5236 chr2L 8013594 intron Tg + chr2L 8016212 intron Tg + chr2L 8018830 intron Tg + chr2L_5_8015001 chr2L_8015001 RAL-894 192 chr2L 8044076 8044128 chr2L 8044175 8044219 18 95 2.0 1.0 1.5 7.2 143 chr2L 8044076 intron CG7466 + chr2L 8044148 intron CG7466 + chr2L 8044219 intron CG7466 + chr2L_18_8040001 chr2L_8040001 RAL-894 193 chr2L 8167137 8167176 chr2L 8167238 8167271 7 103 5.5 3.0 4.2 1.3 134 chr2L 8167137 intron Piezo + chr2L 8167204 intron Piezo + chr2L 8167271 intron Piezo + chr2L_7_8165001 chr2L_8165001 RAL-894 194 chr2L 8171278 8171289 chr2L 8171379 8171390 4 101 0.0 8.5 4.2 0.8 112 chr2L 8171278 intron Piezo + chr2L 8171334 intron Piezo + chr2L 8171390 intron Piezo + chr2L_4_8170001 chr2L_8170001 RAL-894 195 chr2L 8171290 8171301 chr2L 8171378 8171402 7 99 0.0 8.5 4.2 1.3 112 chr2L 8171290 intron Piezo + chr2L 8171346 intron Piezo + chr2L 8171402 intron Piezo + chr2L_7_8170001 chr2L_8170001 RAL-894 196 chr2L 8190172 8190211 chr2L 8190281 8190320 16 109 3.0 3.0 3.0 4.0 148 chr2L 8190172 intergenic Piezo +,CG34134 - chr2L 8190246 intergenic CG34134 -,Piezo + chr2L 8190320 3` UTR CG34134 - chr2L_16_8190001 chr2L_8190001 RAL-894 197 chr2L 8244719 8244750 chr2L 8244853 8244892 7 134 2.0 5.0 3.5 1.6 173 chr2L 8244719 intron CG8086 - chr2L 8244806 intron CG8086 - chr2L 8244892 intron CG8086 - chr2L_7_8240001 chr2L_8240001 RAL-894 198 chr2L 8257886 8257903 chr2L 8258048 8258078 4 166 1.5 2.0 1.8 1.4 192 chr2L 8257886 intergenic CG8086 -,Btk29A - chr2L 8257982 intergenic Btk29A -,CG8086 - chr2L 8258078 intergenic Btk29A - chr2L_4_8255001 chr2L_8255001 RAL-894 199 chr2L 8273346 8273382 chr2L 8273434 8273490 9 103 1.0 3.0 2.0 3.0 144 chr2L 8273346 intron Btk29A - chr2L 8273418 intron Btk29A - chr2L 8273490 intron Btk29A - chr2L_9_8270001 chr2L_8270001 RAL-894 200 chr2L 8340503 8340535 chr2L 8340705 8340742 7 206 5.0 0.0 2.5 2.0 239 chr2L 8340503 intron CG14274 + chr2L 8340622 intron CG14274 + chr2L 8340742 intron CG14274 + chr2L_7_8340001 chr2L_8340001 RAL-894 201 chr2L 8388233 8388264 chr2L 8388345 8388383 10 113 2.0 6.0 4.0 2.0 150 chr2L 8388233 3` UTR CG13384 + chr2L 8388308 3` UTR CG13384 + chr2L 8388383 3` UTR CG13384 + chr2L_10_8385001 chr2L_8385001 RAL-894 202 chr2L 8411770 8411811 chr2L 8411941 8411983 6 170 2.0 2.5 2.2 1.9 213 chr2L 8411770 5` UTR CG13397 - chr2L 8411876 intergenic CG13397 -,CG13398 - chr2L 8411983 intergenic CG13397 -,CG13398 - chr2L_6_8410001 chr2L_8410001 RAL-894 203 chr2L 8451846 8451851 chr2L 8451974 8451984 4 132 4.0 6.0 5.0 0.7 138 chr2L 8451846 5` UTR fu12 - chr2L 8451915 intron fu12 - chr2L 8451984 intron fu12 - chr2L_4_8450001 chr2L_8450001 RAL-894 204 chr2L 8452403 8452452 chr2L 8461590 8461617 roo 19 9185 3.5 5.5 4.5 3.5 9214 chr2L 8452403 intron fu12 - chr2L 8457010 intron fu12 - chr2L 8461617 intron fu12 - chr2L_19_8455001 chr2L_8455001 RAL-894 205 chr2L 8468793 8468827 chr2L 8469251 8469260 6 451 3.5 5.5 4.5 1.1 467 chr2L 8468793 intron d + chr2L 8469026 intron d + chr2L 8469260 intron d + chr2L_6_8465001 chr2L_8465001 RAL-894 206 chr2L 8508815 8508845 chr2L 8509051 8509081 6 236 3.0 0.0 1.5 2.4 266 chr2L 8508815 intergenic CG13096 - chr2L 8508948 intergenic CG13096 - chr2L 8509081 3` UTR CG13096 - chr2L_6_8505001 chr2L_8505001 RAL-894 207 chr2L 8521740 8521783 chr2L 8521845 8521888 11 102 1.0 3.0 2.0 3.7 148 chr2L 8521740 3` UTR CG13091 + chr2L 8521814 intergenic CG13091 +,Acer + chr2L 8521888 intergenic Acer +,CG13091 + chr2L_11_8520001 chr2L_8520001 RAL-894 208 chr2L 8612834 8612869 chr2L 8612931 8612966 11 96 2.5 8.5 5.5 1.7 132 chr2L 8612834 intron Sema-1a + chr2L 8612900 intron Sema-1a + chr2L 8612966 intron Sema-1a + chr2L_11_8610001 chr2L_8610001 RAL-894 209 chr2L 8649913 8649962 chr2L 8650022 8650061 10 106 1.0 5.0 3.0 2.5 148 chr2L 8649913 intron Sema-1a + chr2L 8649987 intron Sema-1a + chr2L 8650061 intron Sema-1a + chr2L_10_8645001 chr2L_8645001 RAL-894 210 chr2L 8719186 8719229 chr2L 8719282 8719325 6 96 4.5 1.0 2.8 1.6 139 chr2L 8719186 intron raw - chr2L 8719256 intron raw - chr2L 8719325 intron raw - chr2L_6_8715001 chr2L_8715001 RAL-894 211 chr2L 8723096 8723134 chr2L 8731492 8731531 Tirant 11 8396 3.0 4.5 3.8 2.3 8435 chr2L 8723096 intron raw - chr2L 8727314 intron raw - chr2L 8731531 intron raw - chr2L_11_8725001 chr2L_8725001 RAL-894 212 chr2L 8750282 8750294 chr2L 8750410 8750422 6 128 2.0 4.0 3.0 1.5 140 chr2L 8750282 intergenic not near genes chr2L 8750352 intergenic not near genes chr2L 8750422 intergenic not near genes chr2L_6_8750001 chr2L_8750001 RAL-894 213 chr2L 8799779 8799832 chr2L 8799915 8799958 11 128 2.0 2.0 2.0 3.7 179 chr2L 8799779 intergenic not near genes chr2L 8799868 intergenic not near genes chr2L 8799958 intergenic not near genes chr2L_11_8795001 chr2L_8795001 RAL-894 214 chr2L 8939647 8939693 chr2L 8939747 8939793 11 98 5.0 7.5 6.2 1.5 146 chr2L 8939647 3` UTR Tsp29Fb + chr2L 8939720 3` UTR Tsp29Fb + chr2L 8939793 3` UTR CG9510 - chr2L_11_8935001 chr2L_8935001 RAL-894 215 chr2L 8956203 8956237 chr2L 8956300 8956334 9 95 4.0 0.0 2.0 3.0 131 chr2L 8956203 intron CG31886 - chr2L 8956268 intron CG31886 - chr2L 8956334 intron CG31886 - chr2L_9_8955001 chr2L_8955001 RAL-894 216 chr2L 9000258 9000309 chr2L 9007788 9007839 roo 12 7528 4.5 1.5 3.0 3.0 7581 chr2L 9000258 intergenic Try29F + chr2L 9004048 intergenic not near genes chr2L 9007839 intergenic not near genes chr2L_12_9000001 chr2L_9000001 RAL-894 217 chr2L 9007794 9007834 chr2L 9007893 9007895 5 87 1.0 0.0 0.5 3.3 101 chr2L 9007794 intergenic not near genes chr2L 9007844 intergenic not near genes chr2L 9007895 intergenic not near genes chr2L_5_9005001 chr2L_9005001 RAL-894 218 chr2L 9025525 9025562 chr2L 9025617 9025659 14 94 4.0 5.0 4.5 2.5 134 chr2L 9025525 intron CG9582 - chr2L 9025592 intron CG9582 - chr2L 9025659 intron,3` UTR CG9582 -,CR44352 - chr2L_14_9025001 chr2L_9025001 RAL-894 219 chr2L 9040030 9040061 chr2L 9040121 9040168 13 101 0.5 3.0 1.8 4.6 138 chr2L 9040030 intergenic not near genes chr2L 9040099 intergenic not near genes chr2L 9040168 intergenic not near genes chr2L_13_9040001 chr2L_9040001 RAL-894 220 chr2L 9109705 9109708 chr2L 9109805 9109813 4 104 6.0 1.5 3.8 0.8 108 chr2L 9109705 intergenic not near genes chr2L 9109759 intergenic not near genes chr2L 9109813 intergenic not near genes chr2L_4_9105001 chr2L_9105001 RAL-894 221 chr2L 9109710 9109722 chr2L 9109787 9109814 6 84 5.0 0.5 2.8 1.6 104 chr2L 9109710 intergenic not near genes chr2L 9109762 intergenic not near genes chr2L 9109814 intergenic not near genes chr2L_6_9105001 chr2L_9105001 RAL-894 222 chr2L 9156570 9156579 chr2L 9156632 9156677 7 85 3.0 4.5 3.8 1.5 107 chr2L 9156570 exon CG32982 + chr2L 9156624 intron CG32982 + chr2L 9156677 intron CG32982 + chr2L_7_9155001 chr2L_9155001 RAL-894 223 chr2L 9158769 9158791 chr2L 9158886 9158908 8 117 8.0 0.0 4.0 1.6 139 chr2L 9158769 intron CG32982 + chr2L 9158838 intron CG32982 + chr2L 9158908 intron CG32982 + chr2L_8_9155001 chr2L_9155001 RAL-894 224 chr2L 9217962 9217995 chr2L 9222759 9222802 Doc 8 4802 4.5 7.0 5.8 1.2 4840 chr2L 9217962 intron tai + chr2L 9220382 intron tai + chr2L 9222802 intron tai + chr2L_8_9220001 chr2L_9220001 RAL-894 225 chr2L 9234891 9234927 chr2L 9234993 9235029 11 101 0.0 8.5 4.2 2.1 138 chr2L 9234891 intron tai + chr2L 9234960 intron tai + chr2L 9235029 intron tai + chr2L_11_9230001 chr2L_9230001 RAL-894 226 chr2L 9279983 9280017 chr2L 9280083 9280131 5 111 1.5 5.5 3.5 1.1 148 chr2L 9279983 intron Ggamma30A + chr2L 9280057 intron Ggamma30A + chr2L 9280131 intron Ggamma30A + chr2L_5_9280001 chr2L_9280001 RAL-894 227 chr2L 9297357 9297402 chr2L 9297454 9297492 14 92 4.0 5.5 4.8 2.4 135 chr2L 9297357 3` UTR Ggamma30A + chr2L 9297424 3` UTR Ggamma30A + chr2L 9297492 3` UTR Ggamma30A + chr2L_14_9295001 chr2L_9295001 RAL-894 228 chr2L 9300683 9300691 chr2L 9300787 9300795 4 104 0.0 0.0 0.0 4.0 112 chr2L 9300683 3` UTR Ggamma30A + chr2L 9300739 3` UTR Ggamma30A + chr2L 9300795 3` UTR Ggamma30A + chr2L_4_9300001 chr2L_9300001 RAL-894 229 chr2L 9303342 9303493 chr2L 9303465 9303589 23 108 0.0 0.0 0.0 23.0 247 chr2L 9303342 intergenic not near genes chr2L 9303466 intergenic not near genes chr2L 9303589 intergenic not near genes chr2L_23_9300001 chr2L_9300001 RAL-894 230 chr2L 9357234 9357281 chr2L 9357335 9357382 11 99 3.5 1.5 2.5 3.1 148 chr2L 9357234 intergenic not near genes chr2L 9357308 intergenic not near genes chr2L 9357382 intergenic not near genes chr2L_11_9355001 chr2L_9355001 RAL-894 231 chr2L 9364282 9364333 chr2L 9364401 9364444 4 117 0.0 2.5 1.2 1.8 162 chr2L 9364282 intergenic CR43404 + chr2L 9364363 intron CR43404 + chr2L 9364444 intron CR43404 + chr2L_4_9360001 chr2L_9360001 RAL-894 232 chr2L 9368348 9368359 chr2L 9368464 9368475 4 116 17.0 26.0 21.5 0.2 127 chr2L 9368348 3` UTR CG34181 + chr2L 9368412 3` UTR CG34181 + chr2L 9368475 intergenic CG34181 + chr2L_4_9365001 chr2L_9365001 RAL-894 233 chr2L 9380246 9380254 chr2L 9380348 9380369 5 108 3.0 2.0 2.5 1.4 123 chr2L 9380246 exon Shawl - chr2L 9380308 intron Shawl - chr2L 9380369 intron Shawl - chr2L_5_9380001 chr2L_9380001 RAL-894 234 chr2L 9387238 9387248 chr2L 9387356 9387366 4 118 4.5 0.0 2.2 1.2 128 chr2L 9387238 intron Shawl - chr2L 9387302 intron Shawl - chr2L 9387366 intron Shawl - chr2L_4_9385001 chr2L_9385001 RAL-894 235 chr2L 9387249 9387274 chr2L 9387354 9387392 4 115 1.5 0.0 0.8 2.2 143 chr2L 9387249 intron Shawl - chr2L 9387320 intron Shawl - chr2L 9387392 intron,5` UTR Shawl -,Aldh + chr2L_4_9385001 chr2L_9385001 RAL-894 236 chr2L 9407888 9407906 chr2L 9407990 9408008 6 102 2.0 5.5 3.8 1.2 120 chr2L 9407888 intron Shawl - chr2L 9407948 intron Shawl - chr2L 9408008 intron Shawl - chr2L_6_9405001 chr2L_9405001 RAL-894 237 chr2L 9463748 9463767 chr2L 9463853 9463872 4 105 6.0 4.0 5.0 0.7 124 chr2L 9463748 intergenic not near genes chr2L 9463810 intergenic not near genes chr2L 9463872 intergenic not near genes chr2L_4_9460001 chr2L_9460001 RAL-894 238 chr2L 9506350 9506372 chr2L 9506445 9506474 4 100 0.0 0.5 0.2 3.3 124 chr2L 9506350 intron CG33298 + chr2L 9506412 intron CG33298 + chr2L 9506474 intron CG33298 + chr2L_4_9505001 chr2L_9505001 RAL-894 239 chr2L 9526836 9526875 chr2L 9526940 9526987 20 110 4.0 5.0 4.5 3.6 151 chr2L 9526836 intron Oatp30B + chr2L 9526912 intron Oatp30B + chr2L 9526987 intron Oatp30B + chr2L_20_9525001 chr2L_9525001 RAL-894 240 chr2L 9610107 9610142 chr2L 9610193 9610230 4 88 2.0 3.0 2.5 1.1 123 chr2L 9610107 intron gcm2 + chr2L 9610168 intron gcm2 + chr2L 9610230 intron gcm2 + chr2L_4_9610001 chr2L_9610001 RAL-894 241 chr2L 9618881 9618914 chr2L 9618978 9619011 6 93 6.0 3.5 4.8 1.0 130 chr2L 9618881 intron GlcAT-S + chr2L 9618946 intron GlcAT-S + chr2L 9619011 intron GlcAT-S + chr2L_6_9615001 chr2L_9615001 RAL-894 242 chr2L 9633823 9633851 chr2L 9633970 9633998 7 147 2.0 2.5 2.2 2.2 175 chr2L 9633823 intergenic Apoltp + chr2L 9633910 intergenic Apoltp + chr2L 9633998 intergenic Apoltp + chr2L_7_9630001 chr2L_9630001 RAL-894 243 chr2L 9663233 9663269 chr2L 9663345 9663380 13 110 3.5 2.0 2.8 3.4 147 chr2L 9663233 intergenic not near genes chr2L 9663306 intergenic not near genes chr2L 9663380 intergenic not near genes chr2L_13_9660001 chr2L_9660001 RAL-894 244 chr2L 9686329 9686381 chr2L 9686432 9686466 19 90 3.0 3.0 3.0 4.8 137 chr2L 9686329 intron Pka-C1 - chr2L 9686398 intron Pka-C1 - chr2L 9686466 intron Pka-C1 - chr2L_19_9685001 chr2L_9685001 RAL-894 245 chr2L 9722245 9722289 chr2L 9722350 9722394 16 103 2.0 7.0 4.5 2.9 149 chr2L 9722245 intron Nckx30C - chr2L 9722320 intron Nckx30C - chr2L 9722394 intron Nckx30C - chr2L_16_9720001 chr2L_9720001 RAL-894 246 chr2L 9770749 9770763 chr2L 9770874 9770888 5 123 4.5 2.5 3.5 1.1 139 chr2L 9770749 intron ppk18 - chr2L 9770818 intron ppk18 - chr2L 9770888 exon ppk18 - chr2L_5_9770001 chr2L_9770001 RAL-894 247 chr2L 9810024 9810034 chr2L 9810154 9810164 6 130 8.0 2.5 5.2 1.0 140 chr2L 9810024 intron nAChRalpha6 - chr2L 9810094 intron nAChRalpha6 - chr2L 9810164 intron nAChRalpha6 - chr2L_6_9810001 chr2L_9810001 RAL-894 248 chr2L 9810038 9810049 chr2L 9810152 9810179 6 126 6.0 2.5 4.2 1.2 141 chr2L 9810038 intron nAChRalpha6 - chr2L 9810108 intron nAChRalpha6 - chr2L 9810179 intron nAChRalpha6 - chr2L_6_9810001 chr2L_9810001 RAL-894 249 chr2L 9819995 9820035 chr2L 9820097 9820142 8 100 1.5 2.5 2.0 2.7 147 chr2L 9819995 intron nAChRalpha6 - chr2L 9820068 intron nAChRalpha6 - chr2L 9820142 intron nAChRalpha6 - chr2L_8_9820001 chr2L_9820001 RAL-894 250 chr2L 9862340 9862355 chr2L 9862468 9862483 6 128 0.0 7.5 3.8 1.2 143 chr2L 9862340 intron nAChRalpha6 - chr2L 9862412 intron nAChRalpha6 - chr2L 9862483 intron nAChRalpha6 - chr2L_6_9860001 chr2L_9860001 RAL-894 251 chr2L 9883144 9883172 chr2L 9883260 9883288 10 113 3.5 4.0 3.8 2.1 144 chr2L 9883144 intron nAChRalpha6 - chr2L 9883216 intron nAChRalpha6 - chr2L 9883288 intron nAChRalpha6 - chr2L_10_9880001 chr2L_9880001 RAL-894 252 chr2L 9892483 9892528 chr2L 9892579 9892624 7 95 2.5 4.0 3.2 1.7 141 chr2L 9892483 intron mtDNA-helicase - chr2L 9892554 intron mtDNA-helicase - chr2L 9892624 intron mtDNA-helicase - chr2L_7_9890001 chr2L_9890001 RAL-894 253 chr2L 9968858 9968913 chr2L 9968957 9969012 9 94 3.5 1.5 2.5 2.6 154 chr2L 9968858 intergenic RpL13 + chr2L 9968935 intergenic RpL13 + chr2L 9969012 intergenic RpL13 + chr2L_9_9965001 chr2L_9965001 RAL-894 254 chr2L 9973713 9973755 chr2L 9980848 9980891 HMS-Beagle 8 7131 1.0 3.0 2.0 2.7 7178 chr2L 9973713 intergenic not near genes chr2L 9977302 intergenic not near genes chr2L 9980891 intergenic not near genes chr2L_8_9975001 chr2L_9975001 RAL-894 255 chr2L 9982196 9982230 chr2L 9982320 9982354 8 122 0.0 5.5 2.8 2.1 158 chr2L 9982196 intergenic not near genes chr2L 9982275 intergenic not near genes chr2L 9982354 intergenic not near genes chr2L_8_9980001 chr2L_9980001 RAL-894 256 chr2L 10023071 10023093 chr2L 10023154 10023165 6 94 3.0 4.0 3.5 1.3 94 chr2L 10023071 intergenic not near genes chr2L 10023118 intergenic not near genes chr2L 10023165 intergenic not near genes chr2L_6_10020001 chr2L_10020001 RAL-894 257 chr2L 10105286 10105310 chr2L 10105382 10105395 4 93 3.0 3.5 3.2 1.0 109 chr2L 10105286 intron,intron CG44153 -,CG34109 + chr2L 10105340 intron,intron CG44153 -,CG34109 + chr2L 10105395 intron,intron CG44153 -,CG34109 + chr2L_4_10105001 chr2L_10105001 RAL-894 258 chr2L 10133061 10133084 chr2L 10133134 10133151 10 74 0.0 2.5 1.2 4.5 90 chr2L 10133061 intron CG44153 - chr2L 10133106 intron CG44153 - chr2L 10133151 intron CG44153 - chr2L_10_10130001 chr2L_10130001 RAL-894 259 chr2L 10135499 10135520 chr2L 10135633 10135654 5 134 1.5 3.0 2.2 1.6 155 chr2L 10135499 intron CG44153 - chr2L 10135576 intron CG44153 - chr2L 10135654 intron CG44153 - chr2L_5_10135001 chr2L_10135001 RAL-894 260 chr2L 10138172 10138183 chr2L 10143438 10143449 Rt1c 5 5266 4.0 5.5 4.8 0.9 5277 chr2L 10138172 intron CG44153 - chr2L 10140810 intron CG44153 - chr2L 10143449 intron CG44153 - chr2L_5_10140001 chr2L_10140001 RAL-894 261 chr2L 10180591 10180606 chr2L 10180683 10180713 4 103 0.5 2.5 1.5 1.6 122 chr2L 10180591 intergenic CG44153 - chr2L 10180652 intergenic CG44153 - chr2L 10180713 intergenic CG44153 - chr2L_4_10180001 chr2L_10180001 RAL-894 262 chr2L 10209829 10209856 chr2L 10209926 10209948 14 94 2.5 0.0 1.2 6.4 119 chr2L 10209829 intergenic CG5727 -,CR44845 +,CG5731 - chr2L 10209888 3` UTR CG5727 - chr2L 10209948 3` UTR CG5727 - chr2L_14_10205001 chr2L_10205001 RAL-894 263 chr2L 10220287 10220331 chr2L 10220691 10220735 18 402 1.0 6.5 3.8 3.8 448 chr2L 10220287 intron Npc1a - chr2L 10220511 intron Npc1a - chr2L 10220735 intron Npc1a - chr2L_18_10220001 chr2L_10220001 RAL-894 264 chr2L 10276178 10276226 chr2L 10276276 10276324 18 97 4.0 5.5 4.8 3.1 146 chr2L 10276178 intron Utx - chr2L 10276251 intron Utx - chr2L 10276324 intron Utx - chr2L_18_10275001 chr2L_10275001 RAL-894 265 chr2L 10277997 10278035 chr2L 10278094 10278110 16 94 3.0 5.5 4.2 3.1 113 chr2L 10277997 intron Utx - chr2L 10278054 intron Utx - chr2L 10278110 intron Utx - chr2L_16_10275001 chr2L_10275001 RAL-894 266 chr2L 10294654 10294689 chr2L 10294760 10294795 16 105 5.5 4.0 4.8 2.8 141 chr2L 10294654 intron Hand - chr2L 10294724 intron Hand - chr2L 10294795 intron Hand - chr2L_16_10290001 chr2L_10290001 RAL-894 267 chr2L 10314496 10314528 chr2L 10314625 10314657 15 128 5.5 6.5 6.0 2.1 161 chr2L 10314496 intergenic CG5384 -,CG4972 + chr2L 10314576 intergenic CG5384 -,CG4972 + chr2L 10314657 intergenic CG4972 +,CG5384 - chr2L_15_10310001 chr2L_10310001 RAL-894 268 chr2L 10458086 10458095 chr2L 10458367 10458373 4 280 0.0 0.5 0.2 3.3 287 chr2L 10458086 intron LM408 + chr2L 10458230 intron LM408 + chr2L 10458373 intron LM408 + chr2L_4_10455001 chr2L_10455001 RAL-894 269 chr2L 10500036 10500072 chr2L 10500142 10500178 6 106 5.0 2.0 3.5 1.3 142 chr2L 10500036 intron Myo31DF - chr2L 10500107 intron Myo31DF - chr2L 10500178 intron Myo31DF - chr2L_6_10500001 chr2L_10500001 RAL-894 270 chr2L 10524723 10524881 chr2L 10524847 10524989 10 124 0.0 0.0 0.0 10.0 266 chr2L 10524723 intergenic not near genes chr2L 10524856 intergenic not near genes chr2L 10524989 intergenic not near genes chr2L_10_10520001 chr2L_10520001 RAL-894 271 chr2L 10531610 10531624 chr2L 10531722 10531736 5 112 0.5 3.5 2.0 1.7 126 chr2L 10531610 3` UTR Lip4 + chr2L 10531673 3` UTR Lip4 + chr2L 10531736 3` UTR Lip4 + chr2L_5_10530001 chr2L_10530001 RAL-894 272 chr2L 10574559 10574600 chr2L 10574676 10574711 11 115 3.0 5.0 4.0 2.2 152 chr2L 10574559 intron Trim9 + chr2L 10574635 intron Trim9 + chr2L 10574711 intron Trim9 + chr2L_11_10570001 chr2L_10570001 RAL-894 273 chr2L 10592826 10592873 chr2L 10600508 10600555 opus 12 7682 2.0 6.0 4.0 2.4 7729 chr2L 10592826 intron Trim9 + chr2L 10596690 intron Trim9 + chr2L 10600555 intron Trim9 + chr2L_12_10595001 chr2L_10595001 RAL-894 274 chr2L 10604194 10604217 chr2L 10604297 10604320 5 102 2.0 5.5 3.8 1.0 126 chr2L 10604194 intron Trim9 + chr2L 10604257 intron Trim9 + chr2L 10604320 intron Trim9 + chr2L_5_10600001 chr2L_10600001 RAL-894 275 chr2L 10640625 10640660 chr2L 10640729 10640744 5 99 3.5 2.5 3.0 1.2 119 chr2L 10640625 exon CG31872 + chr2L 10640684 exon CG31872 + chr2L 10640744 exon CG31872 + chr2L_5_10640001 chr2L_10640001 RAL-894 276 chr2L 10647579 10647600 chr2L 10647724 10647729 6 142 15.0 20.0 17.5 0.3 150 chr2L 10647579 exon CG17097 + chr2L 10647654 exon CG17097 + chr2L 10647729 exon CG17097 + chr2L_6_10645001 chr2L_10645001 RAL-894 277 chr2L 10683429 10683479 chr2L 10683528 10683578 7 99 3.0 0.0 1.5 2.8 149 chr2L 10683429 3` UTR CG7299 - chr2L 10683504 3` UTR CG7299 - chr2L 10683578 3` UTR CG7299 - chr2L_7_10680001 chr2L_10680001 RAL-894 278 chr2L 10705459 10705472 chr2L 10705533 10705561 4 82 0.5 1.5 1.0 2.0 102 chr2L 10705459 exon Lip2 - chr2L 10705510 intron Lip2 - chr2L 10705561 intron Lip2 - chr2L_4_10705001 chr2L_10705001 RAL-894 279 chr2L 10721273 10721306 chr2L 10721372 10721405 4 98 2.0 3.0 2.5 1.1 132 chr2L 10721273 intergenic not near genes chr2L 10721339 intergenic not near genes chr2L 10721405 intergenic not near genes chr2L_4_10720001 chr2L_10720001 RAL-894 280 chr2L 10727262 10727307 chr2L 10727393 10727405 11 127 3.5 0.0 1.8 3.9 143 chr2L 10727262 intron CG6431 + chr2L 10727334 intron CG6431 + chr2L 10727405 intron CG6431 + chr2L_11_10725001 chr2L_10725001 RAL-894 281 chr2L 10852150 10852181 chr2L 10852259 10852290 12 109 10.0 11.0 10.5 1.0 140 chr2L 10852150 intron CG43129 + chr2L 10852220 intron CG43129 + chr2L 10852290 intron CG43129 + chr2L_12_10850001 chr2L_10850001 RAL-894 282 chr2L 10861538 10861543 chr2L 10861602 10861643 4 91 1.5 1.0 1.2 1.8 105 chr2L 10861538 3` UTR Stam + chr2L 10861590 3` UTR Stam + chr2L 10861643 3` UTR Stam + chr2L_4_10860001 chr2L_10860001 RAL-894 283 chr2L 10862843 10862866 chr2L 10864457 10864497 Rt1c 5 1626 3.5 2.0 2.8 1.3 1654 chr2L 10862843 3` UTR CR43807 - chr2L 10863670 intron CR43807 - chr2L 10864497 3` UTR CR43807 - chr2L_5_10860001 chr2L_10860001 RAL-894 284 chr2L 10876550 10876572 chr2L 10883632 10883638 297 5 7076 0.5 4.0 2.2 1.6 7088 chr2L 10876550 intergenic not near genes chr2L 10880094 intergenic not near genes chr2L 10883638 intergenic not near genes chr2L_5_10880001 chr2L_10880001 RAL-894 285 chr2L 10919688 10919720 chr2L 10919825 10919847 5 134 1.0 1.0 1.0 2.5 159 chr2L 10919688 intron dpr2 - chr2L 10919768 intron dpr2 - chr2L 10919847 intron dpr2 - chr2L_5_10915001 chr2L_10915001 RAL-894 286 chr2L 10946937 10946959 chr2L 10956172 10956194 roo 5 9233 1.0 6.0 3.5 1.1 9257 chr2L 10946937 intron dpr2 - chr2L 10951566 intron dpr2 - chr2L 10956194 intron dpr2 - chr2L_5_10950001 chr2L_10950001 RAL-894 287 chr2L 11169584 11169589 chr2L 11169669 11169691 6 98 0.0 6.5 3.2 1.4 107 chr2L 11169584 intron Ca-beta - chr2L 11169638 intron Ca-beta - chr2L 11169691 intron Ca-beta - chr2L_6_11165001 chr2L_11165001 RAL-894 288 chr2L 11189229 11189252 chr2L 11189346 11189369 8 117 4.5 0.0 2.2 2.5 140 chr2L 11189229 intron Ca-beta - chr2L 11189299 intron Ca-beta - chr2L 11189369 intron Ca-beta - chr2L_8_11185001 chr2L_11185001 RAL-894 289 chr2L 11253314 11253355 chr2L 11253415 11253456 7 101 3.5 2.0 2.8 1.8 142 chr2L 11253314 intron ab + chr2L 11253385 intron ab + chr2L 11253456 intron ab + chr2L_7_11250001 chr2L_11250001 RAL-894 290 chr2L 11308990 11309037 chr2L 11309117 11309145 6 120 5.0 0.0 2.5 1.7 155 chr2L 11308990 intergenic not near genes chr2L 11309068 intergenic not near genes chr2L 11309145 intergenic not near genes chr2L_6_11305001 chr2L_11305001 RAL-894 291 chr2L 11403682 11403705 chr2L 11403819 11403832 6 135 1.0 0.5 0.8 3.3 150 chr2L 11403682 intergenic not near genes chr2L 11403757 intergenic not near genes chr2L 11403832 intergenic not near genes chr2L_6_11400001 chr2L_11400001 RAL-894 292 chr2L 11404774 11404800 chr2L 11404861 11404896 13 93 1.0 0.5 0.8 7.2 122 chr2L 11404774 intergenic not near genes chr2L 11404835 intergenic not near genes chr2L 11404896 intergenic not near genes chr2L_13_11400001 chr2L_11400001 RAL-894 293 chr2L 11413271 11413318 chr2L 11413415 11413462 9 144 2.5 4.5 3.5 2.0 191 chr2L 11413271 intergenic not near genes chr2L 11413366 intergenic not near genes chr2L 11413462 intergenic not near genes chr2L_9_11410001 chr2L_11410001 RAL-894 294 chr2L 11414946 11414989 chr2L 11415049 11415090 7 96 4.0 2.5 3.2 1.7 144 chr2L 11414946 intergenic not near genes chr2L 11415018 intergenic not near genes chr2L 11415090 intergenic not near genes chr2L_7_11415001 chr2L_11415001 RAL-894 295 chr2L 11418661 11418680 chr2L 11418740 11418772 8 89 2.5 3.5 3.0 2.0 111 chr2L 11418661 intergenic not near genes chr2L 11418716 intergenic not near genes chr2L 11418772 intergenic not near genes chr2L_8_11415001 chr2L_11415001 RAL-894 296 chr2L 11485672 11485703 chr2L 11485768 11485798 11 96 0.5 0.0 0.2 9.2 126 chr2L 11485672 exon,5` UTR CG43355 +,sala + chr2L 11485735 3` UTR,5` UTR CG43355 +,sala + chr2L 11485798 intron,intron CG43355 +,sala + chr2L_11_11485001 chr2L_11485001 RAL-894 297 chr2L 11540585 11540616 chr2L 11548007 11548024 Tabor 7 7419 4.0 9.5 6.8 0.9 7439 chr2L 11540585 intergenic not near genes chr2L 11544304 intergenic not near genes chr2L 11548024 intergenic not near genes chr2L_7_11540001 chr2L_11540001 RAL-894 298 chr2L 11631824 11631829 chr2L 11631932 11631936 5 108 0.0 1.5 0.8 2.8 112 chr2L 11631824 intergenic not near genes chr2L 11631880 intergenic not near genes chr2L 11631936 intergenic not near genes chr2L_5_11630001 chr2L_11630001 RAL-894 299 chr2L 11633146 11633199 chr2L 11633268 11633307 6 114 1.0 3.5 2.2 1.9 161 chr2L 11633146 intergenic not near genes chr2L 11633226 intergenic not near genes chr2L 11633307 intergenic not near genes chr2L_6_11630001 chr2L_11630001 RAL-894 300 chr2L 11698550 11698581 chr2L 11698663 11698694 10 112 4.5 4.0 4.2 1.9 144 chr2L 11698550 intergenic not near genes chr2L 11698622 intergenic not near genes chr2L 11698694 intergenic not near genes chr2L_10_11695001 chr2L_11695001 RAL-894 301 chr2L 11713496 11713540 chr2L 11720974 11721028 blood 9 7486 5.5 3.0 4.2 1.7 7532 chr2L 11713496 intergenic not near genes chr2L 11717262 intergenic not near genes chr2L 11721028 intergenic CR44143 + chr2L_9_11715001 chr2L_11715001 RAL-894 302 chr2L 11752846 11752892 chr2L 11753155 11753202 14 306 3.0 4.0 3.5 3.1 356 chr2L 11752846 intergenic CG42470 - chr2L 11753024 3` UTR CG42470 - chr2L 11753202 exon CG42470 - chr2L_14_11750001 chr2L_11750001 RAL-894 303 chr2L 11781215 11781245 chr2L 11781313 11781342 9 98 0.5 4.0 2.2 2.8 127 chr2L 11781215 intergenic not near genes chr2L 11781278 intergenic not near genes chr2L 11781342 intergenic not near genes chr2L_9_11780001 chr2L_11780001 RAL-894 304 chr2L 11824930 11824953 chr2L 11825038 11825061 4 108 6.5 1.5 4.0 0.8 131 chr2L 11824930 intron Pde1c - chr2L 11824996 intron Pde1c - chr2L 11825061 intron Pde1c - chr2L_4_11820001 chr2L_11820001 RAL-894 305 chr2L 11825681 11825703 chr2L 11825779 11825790 7 97 5.0 0.0 2.5 2.0 109 chr2L 11825681 intron Pde1c - chr2L 11825736 intron Pde1c - chr2L 11825790 intron Pde1c - chr2L_7_11825001 chr2L_11825001 RAL-894 306 chr2L 11841349 11841381 chr2L 11841447 11841456 6 92 6.5 0.5 3.5 1.3 107 chr2L 11841349 intron Pde1c - chr2L 11841402 intron Pde1c - chr2L 11841456 intron Pde1c - chr2L_6_11840001 chr2L_11840001 RAL-894 307 chr2L 11854026 11854047 chr2L 11854123 11854144 5 97 0.5 0.5 0.5 3.3 118 chr2L 11854026 intron Pde1c - chr2L 11854085 intron Pde1c - chr2L 11854144 intron Pde1c - chr2L_5_11850001 chr2L_11850001 RAL-894 308 chr2L 11870940 11870944 chr2L 11871038 11871042 5 98 3.0 8.0 5.5 0.8 102 chr2L 11870940 intron Pde1c - chr2L 11870991 intron Pde1c - chr2L 11871042 intron Pde1c - chr2L_5_11870001 chr2L_11870001 RAL-894 309 chr2L 11870948 11870973 chr2L 11871022 11871071 9 84 1.0 4.0 2.5 2.6 123 chr2L 11870948 intron Pde1c - chr2L 11871010 intron Pde1c - chr2L 11871071 intron Pde1c - chr2L_9_11870001 chr2L_11870001 RAL-894 310 chr2L 11892527 11892544 chr2L 11892635 11892653 6 108 3.5 4.0 3.8 1.2 126 chr2L 11892527 intron Pde1c - chr2L 11892590 intron Pde1c - chr2L 11892653 intron Pde1c - chr2L_6_11890001 chr2L_11890001 RAL-894 311 chr2L 12046495 12046526 chr2L 12046639 12046670 7 144 2.5 7.5 5.0 1.2 175 chr2L 12046495 5` UTR CR44589 + chr2L 12046582 5` UTR CR44589 + chr2L 12046670 5` UTR CR44589 + chr2L_7_12045001 chr2L_12045001 RAL-894 312 chr2L 12067323 12067354 chr2L 12074387 12074426 297 17 7071 7.0 7.5 7.2 2.1 7103 chr2L 12067323 intergenic not near genes chr2L 12070874 intergenic not near genes chr2L 12074426 intergenic not near genes chr2L_17_12070001 chr2L_12070001 RAL-894 313 chr2L 12080679 12080690 chr2L 12080810 12080821 4 130 2.0 5.5 3.8 0.8 142 chr2L 12080679 intergenic CR44591 +,CR44590 - chr2L 12080750 intergenic CR44590 -,CR44591 + chr2L 12080821 3` UTR CR44590 - chr2L_4_12080001 chr2L_12080001 RAL-894 314 chr2L 12080692 12080703 chr2L 12080798 12080834 4 125 1.5 5.5 3.5 0.9 142 chr2L 12080692 intergenic CR44590 -,CR44591 + chr2L 12080763 intergenic CR44590 -,CR44591 + chr2L 12080834 3` UTR CR44590 - chr2L_4_12080001 chr2L_12080001 RAL-894 315 chr2L 12088325 12088337 chr2L 12088440 12088452 4 115 4.5 1.0 2.8 1.1 127 chr2L 12088325 intergenic CR44593 + chr2L 12088388 intergenic CR44593 + chr2L 12088452 intergenic CR44593 + chr2L_4_12085001 chr2L_12085001 RAL-894 316 chr2L 12131459 12131490 chr2L 12131571 12131606 14 114 6.5 4.0 5.2 2.3 147 chr2L 12131459 intron rho-6 - chr2L 12131532 intron rho-6 - chr2L 12131606 intron rho-6 - chr2L_14_12130001 chr2L_12130001 RAL-894 317 chr2L 12132702 12132748 chr2L 12132808 12132850 14 105 0.0 2.0 1.0 7.0 148 chr2L 12132702 intron rho-6 - chr2L 12132776 intron rho-6 - chr2L 12132850 intron rho-6 - chr2L_14_12130001 chr2L_12130001 RAL-894 318 chr2L 12141195 12141202 chr2L 12141310 12141317 4 115 1.0 2.5 1.8 1.4 122 chr2L 12141195 intergenic not near genes chr2L 12141256 intergenic not near genes chr2L 12141317 intergenic not near genes chr2L_4_12140001 chr2L_12140001 RAL-894 319 chr2L 12169533 12169574 chr2L 12169630 12169674 10 99 5.5 4.5 5.0 1.7 141 chr2L 12169533 3` UTR CG31760 + chr2L 12169604 3` UTR CG31760 + chr2L 12169674 3` UTR CG31760 + chr2L_10_12165001 chr2L_12165001 RAL-894 320 chr2L 12179749 12179791 chr2L 12179854 12179897 13 102 3.5 1.5 2.5 3.7 148 chr2L 12179749 intron aret + chr2L 12179823 intron aret + chr2L 12179897 intron aret + chr2L_13_12175001 chr2L_12175001 RAL-894 321 chr2L 12233758 12233809 chr2L 12233854 12233905 9 95 5.5 5.5 5.5 1.4 147 chr2L 12233758 intron aret + chr2L 12233832 intron aret + chr2L 12233905 intron aret + chr2L_9_12230001 chr2L_12230001 RAL-894 322 chr2L 12236996 12237019 chr2L 12237087 12237122 8 96 6.5 1.0 3.8 1.7 126 chr2L 12236996 intron aret + chr2L 12237059 intron aret + chr2L 12237122 intron aret + chr2L_8_12235001 chr2L_12235001 RAL-894 323 chr2L 12239053 12239079 chr2L 12239161 12239171 9 103 3.0 6.5 4.8 1.6 118 chr2L 12239053 intron aret + chr2L 12239112 intron aret + chr2L 12239171 intron aret + chr2L_9_12235001 chr2L_12235001 RAL-894 324 chr2L 12249888 12249933 chr2L 12250062 12250096 6 166 6.0 0.0 3.0 1.5 208 chr2L 12249888 intron aret + chr2L 12249992 intron aret + chr2L 12250096 intron aret + chr2L_6_12245001 chr2L_12245001 RAL-894 325 chr2L 12269837 12269867 chr2L 12270072 12270102 11 233 4.0 6.5 5.2 1.8 265 chr2L 12269837 intron aret + chr2L 12269970 intron aret + chr2L 12270102 intron aret + chr2L_11_12265001 chr2L_12265001 RAL-894 326 chr2L 12294236 12294254 chr2L 12294338 12294344 5 98 6.5 4.5 5.5 0.8 108 chr2L 12294236 intron aret + chr2L 12294290 intron aret + chr2L 12294344 intron aret + chr2L_5_12290001 chr2L_12290001 RAL-894 327 chr2L 12294258 12294277 chr2L 12294335 12294379 8 99 4.5 4.5 4.5 1.5 121 chr2L 12294258 intron aret + chr2L 12294318 intron aret + chr2L 12294379 intron aret + chr2L_8_12290001 chr2L_12290001 RAL-894 328 chr2L 12337266 12337311 chr2L 12337374 12337415 12 105 2.0 0.0 1.0 6.0 149 chr2L 12337266 intergenic not near genes chr2L 12337340 intergenic not near genes chr2L 12337415 intergenic not near genes chr2L_12_12335001 chr2L_12335001 RAL-894 329 chr2L 12418865 12418901 chr2L 12418970 12419016 4 111 7.0 3.0 5.0 0.7 151 chr2L 12418865 intron vir-1 - chr2L 12418940 intron vir-1 - chr2L 12419016 intron vir-1 - chr2L_4_12415001 chr2L_12415001 RAL-894 330 chr2L 12471133 12471141 chr2L 12471229 12471237 5 94 4.0 7.0 5.5 0.8 104 chr2L 12471133 intron bun - chr2L 12471185 intron bun - chr2L 12471237 intron bun - chr2L_5_12470001 chr2L_12470001 RAL-894 331 chr2L 12487878 12487920 chr2L 12487966 12488010 17 93 2.0 2.5 2.2 5.3 132 chr2L 12487878 intron bun - chr2L 12487944 intron bun - chr2L 12488010 intron bun - chr2L_17_12485001 chr2L_12485001 RAL-894 332 chr2L 12558309 12558353 chr2L 12565453 12565502 HMS-Beagle 7 7139 1.5 3.5 2.5 2.0 7193 chr2L 12558309 intergenic not near genes chr2L 12561906 intergenic not near genes chr2L 12565502 intergenic not near genes chr2L_7_12560001 chr2L_12560001 RAL-894 333 chr2L 12602246 12602263 chr2L 12602399 12602416 6 152 2.5 0.0 1.2 2.7 170 chr2L 12602246 intron nub + chr2L 12602331 intron nub + chr2L 12602416 intron nub + chr2L_6_12600001 chr2L_12600001 RAL-894 334 chr2L 12647186 12647245 chr2L 12647294 12647355 6 105 0.0 4.5 2.2 1.9 169 chr2L 12647186 intergenic not near genes chr2L 12647270 intergenic not near genes chr2L 12647355 intergenic not near genes chr2L_6_12645001 chr2L_12645001 RAL-894 335 chr2L 12693830 12693848 chr2L 12693919 12693945 11 96 5.5 0.5 3.0 2.8 115 chr2L 12693830 exon CG6153 + chr2L 12693888 3` UTR,3` UTR CG6153 +,CG5780 - chr2L 12693945 3` UTR CG5780 - chr2L_11_12690001 chr2L_12690001 RAL-894 336 chr2L 12693850 12693864 chr2L 12693917 12693952 9 93 4.5 0.5 2.5 2.6 102 chr2L 12693850 3` UTR CG6153 + chr2L 12693901 3` UTR,3` UTR CG6153 +,CG5780 - chr2L 12693952 3` UTR CG5780 - chr2L_9_12690001 chr2L_12690001 RAL-894 337 chr2L 12728913 12728932 chr2L 12729170 12729194 pogo 6 258 3.0 2.0 2.5 1.7 281 chr2L 12728913 intron MRP + chr2L 12729054 intron MRP + chr2L 12729194 exon MRP + chr2L_6_12725001 chr2L_12725001 RAL-894 338 chr2L 12731037 12731092 chr2L 12735824 12735855 F-element 15 4782 2.0 4.0 3.0 3.8 4818 chr2L 12731037 intron MRP + chr2L 12733446 intron MRP + chr2L 12735855 intron MRP + chr2L_15_12730001 chr2L_12730001 RAL-894 339 chr2L 12739157 12739198 chr2L 12743954 12743999 Doc 9 4795 1.5 1.0 1.2 4.1 4842 chr2L 12739157 exon MRP + chr2L 12741578 intron MRP + chr2L 12743999 exon MRP + chr2L_9_12740001 chr2L_12740001 RAL-894 340 chr2L 12781784 12781802 chr2L 12789247 12789265 Quasimodo 6 7462 6.5 3.5 5.0 1.0 7481 chr2L 12781784 intergenic not near genes chr2L 12785524 intergenic not near genes chr2L 12789265 intergenic not near genes chr2L_6_12785001 chr2L_12785001 RAL-894 341 chr2L 12781803 12781812 chr2L 12789246 12789254 Quasimodo 4 7453 6.0 3.5 4.8 0.7 7451 chr2L 12781803 intergenic not near genes chr2L 12785528 intergenic not near genes chr2L 12789254 intergenic not near genes chr2L_4_12785001 chr2L_12785001 RAL-894 342 chr2L 12791592 12791624 chr2L 12795287 12795315 F-element 10 3693 1.0 6.5 3.8 2.1 3723 chr2L 12791592 intergenic not near genes chr2L 12793454 intergenic not near genes chr2L 12795315 intergenic not near genes chr2L_10_12790001 chr2L_12790001 RAL-894 343 chr2L 12791629 12791634 chr2L 12795284 12795329 F-element 4 3684 0.5 6.0 3.2 1.0 3700 chr2L 12791629 intergenic not near genes chr2L 12793479 intergenic not near genes chr2L 12795329 intergenic not near genes chr2L_4_12790001 chr2L_12790001 RAL-894 344 chr2L 12812514 12812551 chr2L 12813154 12813157 5 625 5.0 0.5 2.8 1.3 643 chr2L 12812514 intergenic not near genes chr2L 12812836 intergenic not near genes chr2L 12813157 intergenic not near genes chr2L_5_12810001 chr2L_12810001 RAL-894 345 chr2L 12868236 12868268 chr2L 12868330 12868338 6 78 1.5 3.0 2.2 1.9 102 chr2L 12868236 intergenic not near genes chr2L 12868287 intergenic not near genes chr2L 12868338 intergenic not near genes chr2L_6_12865001 chr2L_12865001 RAL-894 346 chr2L 12896363 12896391 chr2L 12896757 12896775 7 393 2.5 1.0 1.8 2.5 412 chr2L 12896363 intergenic not near genes chr2L 12896569 intergenic not near genes chr2L 12896775 intergenic not near genes chr2L_7_12895001 chr2L_12895001 RAL-894 347 chr2L 12930471 12930492 chr2L 12930567 12930588 5 95 2.0 3.5 2.8 1.3 117 chr2L 12930471 intergenic not near genes chr2L 12930530 intergenic not near genes chr2L 12930588 intergenic not near genes chr2L_5_12930001 chr2L_12930001 RAL-894 348 chr2L 12933828 12933851 chr2L 12941315 12941329 blood 6 7480 7.5 2.5 5.0 1.0 7501 chr2L 12933828 intergenic not near genes chr2L 12937578 intergenic not near genes chr2L 12941329 intergenic not near genes chr2L_6_12935001 chr2L_12935001 RAL-894 349 chr2L 13036225 13036274 chr2L 13036487 13036536 X-element 11 261 1.5 2.5 2.0 3.7 311 chr2L 13036225 intron CG9932 - chr2L 13036380 intron CG9932 - chr2L 13036536 intron CG9932 - chr2L_11_13035001 chr2L_13035001 RAL-894 350 chr2L 13147740 13147760 chr2L 13147836 13147845 9 93 5.0 4.5 4.8 1.6 105 chr2L 13147740 intergenic not near genes chr2L 13147792 intergenic not near genes chr2L 13147845 intergenic not near genes chr2L_9_13145001 chr2L_13145001 RAL-894 351 chr2L 13231866 13231905 chr2L 13231997 13232035 9 130 2.0 1.5 1.8 3.2 169 chr2L 13231866 intergenic Prosalpha6T + chr2L 13231950 intergenic Prosalpha6T + chr2L 13232035 intergenic Prosalpha6T + chr2L_9_13230001 chr2L_13230001 RAL-894 352 chr2L 13255266 13255276 chr2L 13255429 13255435 5 162 0.0 0.0 0.0 5.0 169 chr2L 13255266 intron CG31728 + chr2L 13255350 intron CG31728 + chr2L 13255435 intron CG31728 + chr2L_5_13255001 chr2L_13255001 RAL-894 353 chr2L 13294408 13294418 chr2L 13294474 13294520 4 83 1.5 6.0 3.8 0.8 112 chr2L 13294408 intron CG31729 + chr2L 13294464 intron CG31729 + chr2L 13294520 intron CG31729 + chr2L_4_13290001 chr2L_13290001 RAL-894 354 chr2L 13342044 13342078 chr2L 13342133 13342180 11 100 4.0 0.5 2.2 3.4 136 chr2L 13342044 intergenic not near genes chr2L 13342112 intergenic not near genes chr2L 13342180 intergenic not near genes chr2L_11_13340001 chr2L_13340001 RAL-894 355 chr2L 13369269 13369321 chr2L 13369385 13369409 11 109 3.0 4.0 3.5 2.4 140 chr2L 13369269 5` UTR CG31855 + chr2L 13369339 5` UTR CG31855 + chr2L 13369409 exon CG31855 + chr2L_11_13365001 chr2L_13365001 RAL-894 356 chr2L 13398734 13398745 chr2L 13398838 13398844 8 103 3.5 5.0 4.2 1.5 110 chr2L 13398734 intergenic CG10859 -,CR44600 -,CG7110 + chr2L 13398789 intergenic CR44600 -,CG10859 -,CG7110 + chr2L 13398844 intergenic CR44600 -,CG7110 +,CG10859 - chr2L_8_13395001 chr2L_13395001 RAL-894 357 chr2L 13405636 13405672 chr2L 13410448 13410489 Doc 10 4816 1.0 5.0 3.0 2.5 4853 chr2L 13405636 exon CG7110 + chr2L 13408062 intron CG7110 + chr2L 13410489 intron CG7110 + chr2L_10_13405001 chr2L_13405001 RAL-894 358 chr2L 13449442 13449489 chr2L 13456898 13456945 Quasimodo 11 7456 1.5 5.5 3.5 2.4 7503 chr2L 13449442 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453194 intron CG42784 + chr2L 13456945 intron CG42784 + chr2L_11_13450001 chr2L_13450001 RAL-894 359 chr2L 13463170 13463214 chr2L 13463281 13463321 9 103 6.0 3.0 4.5 1.6 151 chr2L 13463170 intron CG42784 + chr2L 13463246 intron CG42784 + chr2L 13463321 intron CG42784 + chr2L_9_13460001 chr2L_13460001 RAL-894 360 chr2L 13481435 13481474 chr2L 13482058 13482101 jockey 14 624 4.0 1.5 2.8 3.7 666 chr2L 13481435 intron CG42784 + chr2L 13481768 intron CG42784 + chr2L 13482101 intron CG42784 + chr2L_14_13480001 chr2L_13480001 RAL-894 361 chr2L 13522266 13522288 chr2L 13527592 13527604 Transpac 7 5323 1.5 6.5 4.0 1.4 5338 chr2L 13522266 intron B4 - chr2L 13524935 intron B4 - chr2L 13527604 intron B4 - chr2L_7_13520001 chr2L_13520001 RAL-894 362 chr2L 13560387 13560408 chr2L 13565228 13565234 F-element 9 4839 8.5 3.5 6.0 1.3 4847 chr2L 13560387 intron kuz + chr2L 13562810 intron kuz + chr2L 13565234 intron kuz + chr2L_9_13560001 chr2L_13560001 RAL-894 363 chr2L 13560410 13560421 chr2L 13565224 13565254 F-element 5 4828 7.0 3.5 5.2 0.8 4844 chr2L 13560410 intron kuz + chr2L 13562832 intron kuz + chr2L 13565254 intron kuz + chr2L_5_13560001 chr2L_13560001 RAL-894 364 chr2L 13677919 13677953 chr2L 13678019 13678053 17 99 5.5 2.0 3.8 3.5 134 chr2L 13677919 3` UTR CG31814 - chr2L 13677986 3` UTR CG31814 - chr2L 13678053 3` UTR CG31814 - chr2L_17_13675001 chr2L_13675001 RAL-894 365 chr2L 13684275 13684287 chr2L 13684351 13684383 9 90 0.5 4.5 2.5 2.6 108 chr2L 13684275 intron CG31814 - chr2L 13684329 intron CG31814 - chr2L 13684383 exon CG31814 - chr2L_9_13680001 chr2L_13680001 RAL-894 366 chr2L 13712375 13712411 chr2L 13712477 13712516 10 109 3.5 4.0 3.8 2.1 141 chr2L 13712375 intron CG31814 - chr2L 13712446 intron CG31814 - chr2L 13712516 intron CG31814 - chr2L_10_13710001 chr2L_13710001 RAL-894 367 chr2L 13713543 13713574 chr2L 13713639 13713670 12 96 1.5 5.5 3.5 2.7 127 chr2L 13713543 intron CG31814 - chr2L 13713606 intron CG31814 - chr2L 13713670 intron CG31814 - chr2L_12_13710001 chr2L_13710001 RAL-894 368 chr2L 13749192 13749208 chr2L 13749295 13749311 5 101 0.0 0.0 0.0 5.0 119 chr2L 13749192 intron,intron CR44846 +,TM9SF4 + chr2L 13749252 intron,intron CR44846 +,TM9SF4 + chr2L 13749311 intron,intron CR44846 +,TM9SF4 + chr2L_5_13745001 chr2L_13745001 RAL-894 369 chr2L 13761792 13761825 chr2L 13762922 13762943 Doc 5 1128 9.0 3.0 6.0 0.7 1151 chr2L 13761792 intron TM9SF4 + chr2L 13762368 intron TM9SF4 + chr2L 13762943 intron TM9SF4 + chr2L_5_13760001 chr2L_13760001 RAL-894 370 chr2L 13833204 13833237 chr2L 13833289 13833337 8 93 1.5 2.5 2.0 2.7 133 chr2L 13833204 intergenic CG33649 -,DNApol-gamma35 -,RpII33 + chr2L 13833270 intergenic RpII33 +,CG33649 -,DNApol-gamma35 - chr2L 13833337 5` UTR RpII33 + chr2L_8_13830001 chr2L_13830001 RAL-894 371 chr2L 13842114 13842165 chr2L 13842218 13842269 13 103 4.5 2.5 3.5 2.9 155 chr2L 13842114 intron CenG1A + chr2L 13842192 intron CenG1A + chr2L 13842269 intron CenG1A + chr2L_13_13840001 chr2L_13840001 RAL-894 372 chr2L 13852506 13852552 chr2L 13852612 13852650 7 96 1.0 2.0 1.5 2.8 144 chr2L 13852506 intron CenG1A + chr2L 13852578 intron CenG1A + chr2L 13852650 intron CenG1A + chr2L_7_13850001 chr2L_13850001 RAL-894 373 chr2L 13853089 13853116 chr2L 13862246 13862286 roo 7 9168 4.0 3.0 3.5 1.6 9197 chr2L 13853089 intron CenG1A + chr2L 13857688 intron CenG1A + chr2L 13862286 intron CenG1A + chr2L_7_13855001 chr2L_13855001 RAL-894 374 chr2L 13914792 13914843 chr2L 13914892 13914943 6 100 1.5 4.5 3.0 1.5 151 chr2L 13914792 5` UTR Ance-3 + chr2L 13914868 5` UTR Ance-3 + chr2L 13914943 5` UTR Ance-3 + chr2L_6_13910001 chr2L_13910001 RAL-894 375 chr2L 13988263 13988300 chr2L 13988370 13988407 7 106 3.0 6.5 4.8 1.2 144 chr2L 13988263 intron rk - chr2L 13988335 intron rk - chr2L 13988407 intron rk - chr2L_7_13985001 chr2L_13985001 RAL-894 376 chr2L 14020398 14020448 chr2L 14020500 14020541 7 98 0.0 4.0 2.0 2.3 143 chr2L 14020398 intergenic CR44849 +,NimC3 - chr2L 14020470 intergenic CR44849 +,NimC3 - chr2L 14020541 intergenic CR44849 +,NimC3 - chr2L_7_14020001 chr2L_14020001 RAL-894 377 chr2L 14102845 14102852 chr2L 14102936 14102958 4 102 0.0 0.0 0.0 4.0 113 chr2L 14102845 intergenic not near genes chr2L 14102902 intergenic not near genes chr2L 14102958 intergenic not near genes chr2L_4_14100001 chr2L_14100001 RAL-894 378 chr2L 14135213 14135256 chr2L 14135311 14135355 16 100 4.5 0.0 2.2 5.0 142 chr2L 14135213 intron CG17341 + chr2L 14135284 intron CG17341 + chr2L 14135355 intron CG17341 + chr2L_16_14135001 chr2L_14135001 RAL-894 379 chr2L 14160667 14160712 chr2L 14160773 14160818 8 104 0.5 3.0 1.8 2.9 151 chr2L 14160667 intergenic CG17341 +,CG43332 - chr2L 14160742 intergenic CG17341 +,CG43332 - chr2L 14160818 intergenic CG17341 +,CG43332 - chr2L_8_14160001 chr2L_14160001 RAL-894 380 chr2L 14229606 14229622 chr2L 14229719 14229735 6 113 0.0 1.0 0.5 4.0 129 chr2L 14229606 intron Dyrk2 - chr2L 14229670 intron Dyrk2 - chr2L 14229735 intron Dyrk2 - chr2L_6_14225001 chr2L_14225001 RAL-894 381 chr2L 14374766 14374776 chr2L 14374877 14374877 7 109 2.5 2.5 2.5 2.0 111 chr2L 14374766 intergenic not near genes chr2L 14374822 intergenic not near genes chr2L 14374877 intergenic not near genes chr2L_7_14370001 chr2L_14370001 RAL-894 382 chr2L 14374777 14374786 chr2L 14374873 14374890 7 105 2.5 2.5 2.5 2.0 113 chr2L 14374777 intergenic not near genes chr2L 14374834 intergenic not near genes chr2L 14374890 intergenic not near genes chr2L_7_14370001 chr2L_14370001 RAL-894 383 chr2L 14427790 14427833 chr2L 14427904 14427950 16 107 5.5 7.0 6.2 2.2 160 chr2L 14427790 intergenic not near genes chr2L 14427870 intergenic not near genes chr2L 14427950 intergenic not near genes chr2L_16_14425001 chr2L_14425001 RAL-894 384 chr2L 14461270 14461299 chr2L 14461377 14461396 4 104 0.5 3.5 2.0 1.3 126 chr2L 14461270 intergenic not near genes chr2L 14461333 intergenic not near genes chr2L 14461396 intergenic not near genes chr2L_4_14460001 chr2L_14460001 RAL-894 385 chr2L 14465569 14465613 chr2L 14469052 14469096 hopper2 14 3480 4.5 3.5 4.0 2.8 3527 chr2L 14465569 intergenic not near genes chr2L 14467332 intergenic not near genes chr2L 14469096 intergenic not near genes chr2L_14_14465001 chr2L_14465001 RAL-894 386 chr2L 14549140 14549158 chr2L 14549236 14549254 5 96 5.5 4.0 4.8 0.9 114 chr2L 14549140 intergenic CG4218 - chr2L 14549197 intergenic CG4218 - chr2L 14549254 intergenic CG4218 - chr2L_5_14545001 chr2L_14545001 RAL-894 387 chr2L 14583774 14583804 chr2L 14583893 14583924 8 117 9.5 3.5 6.5 1.1 150 chr2L 14583774 intergenic not near genes chr2L 14583849 intergenic not near genes chr2L 14583924 intergenic not near genes chr2L_8_14580001 chr2L_14580001 RAL-894 388 chr2L 14588365 14588381 chr2L 14588539 14588554 7 174 4.5 2.5 3.5 1.6 189 chr2L 14588365 intergenic CG42680 - chr2L 14588460 intergenic CG42680 - chr2L 14588554 intergenic CG42680 - chr2L_7_14585001 chr2L_14585001 RAL-894 389 chr2L 14588382 14588419 chr2L 14588536 14588568 9 164 3.5 2.5 3.0 2.2 186 chr2L 14588382 intergenic CG42680 - chr2L 14588475 intergenic CG42680 - chr2L 14588568 intergenic CG42680 - chr2L_9_14585001 chr2L_14585001 RAL-894 390 chr2L 14601968 14602001 chr2L 14602061 14602105 10 99 5.5 3.0 4.2 1.9 137 chr2L 14601968 exon osp - chr2L 14602036 intron osp - chr2L 14602105 intron osp - chr2L_10_14600001 chr2L_14600001 RAL-894 391 chr2L 14633432 14633446 chr2L 14633569 14633592 6 142 6.0 1.0 3.5 1.3 160 chr2L 14633432 intron osp - chr2L 14633512 intron osp - chr2L 14633592 intron osp - chr2L_6_14630001 chr2L_14630001 RAL-894 392 chr2L 14716618 14716634 chr2L 14716685 14716732 9 94 1.5 3.0 2.2 2.8 114 chr2L 14716618 intergenic not near genes chr2L 14716675 intergenic not near genes chr2L 14716732 intergenic not near genes chr2L_9_14715001 chr2L_14715001 RAL-894 393 chr2L 14724421 14724435 chr2L 14724575 14724589 6 154 3.0 2.5 2.8 1.6 168 chr2L 14724421 intergenic CG42685 - chr2L 14724505 intergenic CG42685 - chr2L 14724589 intergenic CG42685 - chr2L_6_14720001 chr2L_14720001 RAL-894 394 chr2L 14833780 14833793 chr2L 14833904 14833917 5 122 8.0 3.5 5.8 0.7 137 chr2L 14833780 intergenic not near genes chr2L 14833848 intergenic not near genes chr2L 14833917 intergenic not near genes chr2L_5_14830001 chr2L_14830001 RAL-894 395 chr2L 14833798 14833821 chr2L 14833897 14833944 5 110 2.5 3.0 2.8 1.3 146 chr2L 14833798 intergenic not near genes chr2L 14833871 intergenic not near genes chr2L 14833944 intergenic not near genes chr2L_5_14830001 chr2L_14830001 RAL-894 396 chr2L 14840977 14841004 chr2L 14841078 14841104 9 105 2.5 1.5 2.0 3.0 127 chr2L 14840977 3` UTR CR43805 - chr2L 14841040 3` UTR CR43805 - chr2L 14841104 3` UTR CR43805 - chr2L_9_14840001 chr2L_14840001 RAL-894 397 chr2L 14889933 14889980 chr2L 14890378 14890412 jockey 11 443 5.0 5.0 5.0 1.8 479 chr2L 14889933 intergenic not near genes chr2L 14890172 intergenic not near genes chr2L 14890412 intergenic not near genes chr2L_11_14890001 chr2L_14890001 RAL-894 398 chr2L 14933355 14933401 chr2L 14933453 14933499 10 97 4.5 3.5 4.0 2.0 144 chr2L 14933355 intron CG42313 - chr2L 14933427 intron CG42313 - chr2L 14933499 intron CG42313 - chr2L_10_14930001 chr2L_14930001 RAL-894 399 chr2L 14973110 14973121 chr2L 14973224 14973235 4 114 0.0 4.0 2.0 1.3 125 chr2L 14973110 intergenic not near genes chr2L 14973172 intergenic not near genes chr2L 14973235 intergenic not near genes chr2L_4_14970001 chr2L_14970001 RAL-894 400 chr2L 14984381 14984386 chr2L 14991978 14992006 opus 7 7614 3.5 4.5 4.0 1.4 7625 chr2L 14984381 intron mol - chr2L 14988194 intron mol - chr2L 14992006 intron mol - chr2L_7_14985001 chr2L_14985001 RAL-894 401 chr2L 15044713 15044731 chr2L 15044797 15044826 5 92 6.0 0.5 3.2 1.2 113 chr2L 15044713 intergenic ck - chr2L 15044770 intergenic ck - chr2L 15044826 intergenic ck - chr2L_5_15040001 chr2L_15040001 RAL-894 402 chr2L 15082646 15082689 chr2L 15082754 15082803 11 109 1.0 3.5 2.2 3.4 157 chr2L 15082646 intron CG15270 + chr2L 15082724 intron CG15270 + chr2L 15082803 intron CG15270 + chr2L_11_15080001 chr2L_15080001 RAL-894 403 chr2L 15122764 15122805 chr2L 15122859 15122905 5 97 4.0 5.0 4.5 0.9 141 chr2L 15122764 intergenic not near genes chr2L 15122834 intergenic not near genes chr2L 15122905 intergenic not near genes chr2L_5_15120001 chr2L_15120001 RAL-894 404 chr2L 15138761 15138803 chr2L 15138864 15138910 4 105 0.0 3.5 1.8 1.4 149 chr2L 15138761 intergenic not near genes chr2L 15138836 intergenic not near genes chr2L 15138910 intergenic not near genes chr2L_4_15135001 chr2L_15135001 RAL-894 405 chr2L 15171594 15171643 chr2L 15173010 15173057 15 1414 5.0 2.5 3.8 3.1 1463 chr2L 15171594 intron CG4168 - chr2L 15172326 intron CG4168 - chr2L 15173057 intron CG4168 - chr2L_15_15170001 chr2L_15170001 RAL-894 406 chr2L 15216101 15216111 chr2L 15216235 15216245 6 134 2.0 0.0 1.0 3.0 144 chr2L 15216101 3` UTR CG43230 + chr2L 15216173 intergenic CG43230 + chr2L 15216245 intergenic CG43230 + chr2L_6_15215001 chr2L_15215001 RAL-894 407 chr2L 15318948 15318978 chr2L 15319044 15319075 4 97 3.0 5.0 4.0 0.8 127 chr2L 15318948 intergenic nht - chr2L 15319012 intergenic nht - chr2L 15319075 intergenic nht - chr2L_4_15315001 chr2L_15315001 RAL-894 408 chr2L 15324577 15324612 chr2L 15324666 15324681 5 81 4.5 3.0 3.8 1.0 104 chr2L 15324577 intergenic not near genes chr2L 15324629 intergenic not near genes chr2L 15324681 intergenic not near genes chr2L_5_15320001 chr2L_15320001 RAL-894 409 chr2L 15342323 15342375 chr2L 15342425 15342467 10 100 4.0 2.5 3.2 2.4 144 chr2L 15342323 intergenic not near genes chr2L 15342395 intergenic not near genes chr2L 15342467 intergenic not near genes chr2L_10_15340001 chr2L_15340001 RAL-894 410 chr2L 15401237 15401276 chr2L 15401333 15401342 7 89 5.5 1.5 3.5 1.6 105 chr2L 15401237 intergenic not near genes chr2L 15401290 intergenic not near genes chr2L 15401342 intergenic not near genes chr2L_7_15400001 chr2L_15400001 RAL-894 411 chr2L 15446033 15446072 chr2L 15453521 15453534 blood 5 7483 4.0 2.0 3.0 1.2 7501 chr2L 15446033 intergenic not near genes chr2L 15449784 intergenic not near genes chr2L 15453534 intergenic not near genes chr2L_5_15445001 chr2L_15445001 RAL-894 412 chr2L 15500050 15500062 chr2L 15500144 15500160 9 98 2.0 4.0 3.0 2.2 110 chr2L 15500050 intron lace + chr2L 15500105 intron lace + chr2L 15500160 intron lace + chr2L_9_15500001 chr2L_15500001 RAL-894 413 chr2L 15500803 15500855 chr2L 15500900 15500952 13 91 4.5 5.5 5.0 2.2 149 chr2L 15500803 intron lace + chr2L 15500878 intron lace + chr2L 15500952 intron lace + chr2L_13_15500001 chr2L_15500001 RAL-894 414 chr2L 15510915 15510957 chr2L 15511029 15511071 17 113 6.5 2.5 4.5 3.1 156 chr2L 15510915 intergenic not near genes chr2L 15510993 intergenic not near genes chr2L 15511071 intergenic not near genes chr2L_17_15510001 chr2L_15510001 RAL-894 415 chr2L 15535872 15535916 chr2L 15535976 15536026 9 106 3.5 4.0 3.8 1.9 154 chr2L 15535872 intergenic not near genes chr2L 15535949 intergenic not near genes chr2L 15536026 intergenic not near genes chr2L_9_15535001 chr2L_15535001 RAL-894 416 chr2L 15586390 15586436 chr2L 15593461 15593506 297 9 7071 2.5 1.5 2.0 3.0 7116 chr2L 15586390 intergenic not near genes chr2L 15589948 intergenic not near genes chr2L 15593506 intergenic not near genes chr2L_9_15585001 chr2L_15585001 RAL-894 417 chr2L 15636655 15636669 chr2L 15636751 15636765 4 95 2.0 2.0 2.0 1.3 110 chr2L 15636655 intergenic not near genes chr2L 15636710 intergenic not near genes chr2L 15636765 intergenic not near genes chr2L_4_15635001 chr2L_15635001 RAL-894 418 chr2L 15750008 15750016 chr2L 15750141 15750149 5 133 6.5 0.0 3.2 1.2 141 chr2L 15750008 intron l(2)35Di - chr2L 15750078 intron l(2)35Di - chr2L 15750149 intron l(2)35Di - chr2L_5_15750001 chr2L_15750001 RAL-894 419 chr2L 15820232 15820272 chr2L 15820367 15820407 9 134 7.5 1.5 4.5 1.6 175 chr2L 15820232 intergenic not near genes chr2L 15820320 intergenic not near genes chr2L 15820407 intergenic not near genes chr2L_9_15820001 chr2L_15820001 RAL-894 420 chr2L 15823340 15823368 chr2L 15823436 15823462 8 95 5.0 3.0 4.0 1.6 122 chr2L 15823340 intergenic CR44601 - chr2L 15823401 intergenic CR44601 - chr2L 15823462 intergenic not near genes chr2L_8_15820001 chr2L_15820001 RAL-894 421 chr2L 15826874 15826889 chr2L 15829288 15829303 Tabor 5 2413 4.5 4.5 4.5 0.9 2429 chr2L 15826874 intergenic not near genes chr2L 15828088 intergenic not near genes chr2L 15829303 intergenic not near genes chr2L_5_15825001 chr2L_15825001 RAL-894 422 chr2L 15934036 15934080 chr2L 15934151 15934158 9 111 3.5 0.0 1.8 3.2 122 chr2L 15934036 intron beat-Ib - chr2L 15934097 intron beat-Ib - chr2L 15934158 intron beat-Ib - chr2L_9_15930001 chr2L_15930001 RAL-894 423 chr2L 15950363 15950413 chr2L 15950461 15950511 11 95 1.0 1.5 1.2 5.0 148 chr2L 15950363 intron beat-Ib - chr2L 15950437 intron beat-Ib - chr2L 15950511 intron beat-Ib - chr2L_11_15950001 chr2L_15950001 RAL-894 424 chr2L 15956011 15956057 chr2L 15957498 15957524 hobo 9 1477 6.0 5.5 5.8 1.3 1513 chr2L 15956011 intron beat-Ib - chr2L 15956768 intron beat-Ib - chr2L 15957524 intron beat-Ib - chr2L_9_15955001 chr2L_15955001 RAL-894 425 chr2L 16005508 16005655 chr2L 16005614 16005784 17 125 0.0 0.0 0.0 17.0 276 chr2L 16005508 intron beat-Ic + chr2L 16005646 intron beat-Ic + chr2L 16005784 intron beat-Ic + chr2L_17_16005001 chr2L_16005001 RAL-894 426 chr2L 16058108 16058151 chr2L 16058269 16058312 13 159 5.0 1.0 3.0 3.2 204 chr2L 16058108 intron beat-Ia + chr2L 16058210 intron beat-Ia + chr2L 16058312 intron beat-Ia + chr2L_13_16055001 chr2L_16055001 RAL-894 427 chr2L 16058673 16058681 chr2L 16058763 16058783 4 94 1.5 5.5 3.5 0.9 110 chr2L 16058673 intron beat-Ia + chr2L 16058728 intron beat-Ia + chr2L 16058783 intron beat-Ia + chr2L_4_16055001 chr2L_16055001 RAL-894 428 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 6 145889 10.5 12.5 11.5 0.5 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_6_16140001 chr2L_16140001 RAL-894 429 chr2L 16087629 16087678 chr2L 16087956 16088006 10 325 2.0 4.0 3.0 2.5 377 chr2L 16087629 intergenic not near genes chr2L 16087818 intergenic not near genes chr2L 16088006 intergenic not near genes chr2L_10_16085001 chr2L_16085001 RAL-894 430 chr2L 16141149 16141160 chr2L 16146376 16146387 copia 4 5227 8.5 3.0 5.8 0.6 5238 chr2L 16141149 intergenic not near genes chr2L 16143768 intergenic not near genes chr2L 16146387 intergenic not near genes chr2L_4_16140001 chr2L_16140001 RAL-894 431 chr2L 16141167 16141192 chr2L 16146374 16146419 copia 7 5224 5.0 3.0 4.0 1.4 5252 chr2L 16141167 intergenic not near genes chr2L 16143793 intergenic not near genes chr2L 16146419 intergenic not near genes chr2L_7_16140001 chr2L_16140001 RAL-894 432 chr2L 16153729 16153749 chr2L 16160791 16160818 297 6 7064 5.5 6.0 5.8 0.9 7089 chr2L 16153729 intergenic not near genes chr2L 16157274 intergenic not near genes chr2L 16160818 intergenic not near genes chr2L_6_16155001 chr2L_16155001 RAL-894 433 chr2L 16354567 16354580 chr2L 16354683 16354695 4 114 2.0 0.0 1.0 2.0 128 chr2L 16354567 intergenic CG4455 +,CaBP1 - chr2L 16354631 intergenic CG4455 +,CaBP1 - chr2L 16354695 intergenic CG4455 +,CaBP1 - chr2L_4_16350001 chr2L_16350001 RAL-894 434 chr2L 16356902 16356952 chr2L 16356998 16357003 7 85 0.5 2.0 1.2 3.2 101 chr2L 16356902 intergenic CaBP1 - chr2L 16356952 intergenic CaBP1 - chr2L 16357003 intergenic CaBP1 - chr2L_7_16355001 chr2L_16355001 RAL-894 435 chr2L 16363922 16363968 chr2L 16364188 16364234 17 264 5.5 2.0 3.8 3.5 312 chr2L 16363922 intergenic not near genes chr2L 16364078 intergenic not near genes chr2L 16364234 intergenic not near genes chr2L_17_16360001 chr2L_16360001 RAL-894 436 chr2L 16504990 16504998 chr2L 16505111 16505128 7 127 0.0 5.5 2.8 1.8 138 chr2L 16504990 intron Tpr2 + chr2L 16505059 intron Tpr2 + chr2L 16505128 intron Tpr2 + chr2L_7_16505001 chr2L_16505001 RAL-894 437 chr2L 16511977 16511995 chr2L 16519124 16519142 HMS-Beagle 6 7147 3.5 9.0 6.2 0.8 7165 chr2L 16511977 intron CG5953 - chr2L 16515560 intron CG5953 - chr2L 16519142 intron CG5953 - chr2L_6_16515001 chr2L_16515001 RAL-894 438 chr2L 16570827 16570855 chr2L 16570918 16570951 8 94 0.0 0.0 0.0 8.0 124 chr2L 16570827 intron CG42389 + chr2L 16570889 intron CG42389 + chr2L 16570951 intron CG42389 + chr2L_8_16570001 chr2L_16570001 RAL-894 439 chr2L 16589803 16589826 chr2L 16589913 16589936 7 108 3.5 11.5 7.5 0.8 133 chr2L 16589803 intron CG42389 + chr2L 16589870 intron CG42389 + chr2L 16589936 intron CG42389 + chr2L_7_16585001 chr2L_16585001 RAL-894 440 chr2L 16697029 16697067 chr2L 16697264 16697302 8 235 3.0 3.5 3.2 1.9 273 chr2L 16697029 intron grp + chr2L 16697166 intron grp + chr2L 16697302 intron grp + chr2L_8_16695001 chr2L_16695001 RAL-894 441 chr2L 16739156 16739177 chr2L 16742306 16742339 4 3164 10.5 14.5 12.5 0.3 3183 chr2L 16739156 exon ChLD3 + chr2L 16740748 exon ChLD3 + chr2L 16742339 3` UTR,3` UTR ChLD3 +,LSm7 - chr2L_4_16740001 chr2L_16740001 RAL-894 442 chr2L 16764950 16764988 chr2L 16765050 16765088 11 100 5.5 3.0 4.2 2.1 138 chr2L 16764950 intergenic not near genes chr2L 16765019 intergenic not near genes chr2L 16765088 intergenic not near genes chr2L_11_16765001 chr2L_16765001 RAL-894 443 chr2L 16796395 16796427 chr2L 16796520 16796552 11 125 5.0 7.0 6.0 1.6 157 chr2L 16796395 intergenic Ugt36Bb +,Ugt36Ba + chr2L 16796474 intergenic Ugt36Bb +,Ugt36Ba + chr2L 16796552 intergenic Ugt36Bb + chr2L_11_16795001 chr2L_16795001 RAL-894 444 chr2L 16804416 16804438 chr2L 16804522 16804544 5 106 4.0 5.0 4.5 0.9 128 chr2L 16804416 intron CG13280 - chr2L 16804480 intron CG13280 - chr2L 16804544 intron CG13280 - chr2L_5_16800001 chr2L_16800001 RAL-894 445 chr2L 16810991 16811036 chr2L 16811094 16811139 9 103 4.0 8.0 6.0 1.3 148 chr2L 16810991 intron,intron CG13280 -,CG13272 + chr2L 16811065 intron,intron CG13280 -,CG13272 + chr2L 16811139 intron,intron CG13280 -,CG13272 + chr2L_9_16810001 chr2L_16810001 RAL-894 446 chr2L 16840998 16841042 chr2L 16841094 16841138 9 94 2.0 4.0 3.0 2.2 140 chr2L 16840998 intron,intron SclA +,SclB + chr2L 16841068 intron,intron SclA +,SclB + chr2L 16841138 intron,intron SclA +,SclB + chr2L_9_16840001 chr2L_16840001 RAL-894 447 chr2L 16958088 16958134 chr2L 16962896 16962942 Doc 14 4807 2.5 6.0 4.2 2.7 4854 chr2L 16958088 intergenic not near genes chr2L 16960515 intergenic not near genes chr2L 16962942 intergenic not near genes chr2L_14_16960001 chr2L_16960001 RAL-894 448 chr2L 17000106 17000134 chr2L 17000248 17000261 4 138 6.0 5.0 5.5 0.6 155 chr2L 17000106 intergenic not near genes chr2L 17000184 intergenic not near genes chr2L 17000261 intergenic not near genes chr2L_4_17000001 chr2L_17000001 RAL-894 449 chr2L 17005392 17005435 chr2L 17005509 17005552 4 110 1.0 4.5 2.8 1.1 160 chr2L 17005392 intergenic not near genes chr2L 17005472 intergenic not near genes chr2L 17005552 intergenic not near genes chr2L_4_17005001 chr2L_17005001 RAL-894 450 chr2L 17052393 17052406 chr2L 17052525 17052538 4 132 5.5 1.5 3.5 0.9 145 chr2L 17052393 intergenic not near genes chr2L 17052466 intergenic not near genes chr2L 17052538 intergenic not near genes chr2L_4_17050001 chr2L_17050001 RAL-894 451 chr2L 17062739 17062760 chr2L 17062841 17062862 4 102 3.0 1.5 2.2 1.2 123 chr2L 17062739 intergenic not near genes chr2L 17062800 intergenic not near genes chr2L 17062862 intergenic not near genes chr2L_4_17060001 chr2L_17060001 RAL-894 452 chr2L 17079443 17079478 chr2L 17079548 17079584 12 103 5.0 2.5 3.8 2.5 141 chr2L 17079443 intergenic not near genes chr2L 17079514 intergenic not near genes chr2L 17079584 intergenic not near genes chr2L_12_17075001 chr2L_17075001 RAL-894 453 chr2L 17129823 17129872 chr2L 17129948 17129972 7 118 3.5 5.5 4.5 1.3 149 chr2L 17129823 intergenic not near genes chr2L 17129898 intergenic not near genes chr2L 17129972 intergenic not near genes chr2L_7_17125001 chr2L_17125001 RAL-894 454 chr2L 17158727 17158758 chr2L 17158849 17158880 6 122 0.5 2.5 1.5 2.4 153 chr2L 17158727 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158804 intron,intron CG34106 +,beat-IIIa + chr2L 17158880 intron,intron CG34106 +,beat-IIIa + chr2L_6_17155001 chr2L_17155001 RAL-894 455 chr2L 17163588 17163634 chr2L 17163697 17163743 9 108 3.5 3.0 3.2 2.1 155 chr2L 17163588 intron,intron CG34106 +,beat-IIIa + chr2L 17163666 intron,intron CG34106 +,beat-IIIa + chr2L 17163743 intron,intron CG34106 +,beat-IIIa + chr2L_9_17160001 chr2L_17160001 RAL-894 456 chr2L 17167545 17167561 chr2L 17167806 17167822 pogo 5 261 4.5 1.0 2.8 1.3 277 chr2L 17167545 intron,intron CG34106 +,beat-IIIa + chr2L 17167684 intron,intron CG34106 +,beat-IIIa + chr2L 17167822 intron,intron CG34106 +,beat-IIIa + chr2L_5_17165001 chr2L_17165001 RAL-894 457 chr2L 17199147 17199181 chr2L 17200629 17200668 hobo 10 1483 7.0 4.5 5.8 1.5 1521 chr2L 17199147 intron beat-IIIc - chr2L 17199908 intron beat-IIIc - chr2L 17200668 intron beat-IIIc - chr2L_10_17195001 chr2L_17195001 RAL-894 458 chr2L 17206162 17206205 chr2L 17206263 17206300 11 97 3.0 6.0 4.5 2.0 138 chr2L 17206162 intron beat-IIIc - chr2L 17206231 intron beat-IIIc - chr2L 17206300 intron beat-IIIc - chr2L_11_17205001 chr2L_17205001 RAL-894 459 chr2L 17239023 17239069 chr2L 17239127 17239173 19 104 4.0 7.0 5.5 2.9 150 chr2L 17239023 intron beat-IIIc - chr2L 17239098 intron beat-IIIc - chr2L 17239173 intron beat-IIIc - chr2L_19_17235001 chr2L_17235001 RAL-894 460 chr2L 17264740 17264747 chr2L 17264840 17264847 4 100 7.5 6.5 7.0 0.5 107 chr2L 17264740 intergenic not near genes chr2L 17264794 intergenic not near genes chr2L 17264847 intergenic not near genes chr2L_4_17260001 chr2L_17260001 RAL-894 461 chr2L 17264748 17264760 chr2L 17264838 17264860 4 96 3.0 6.5 4.8 0.7 112 chr2L 17264748 intergenic not near genes chr2L 17264804 intergenic not near genes chr2L 17264860 intergenic not near genes chr2L_4_17260001 chr2L_17260001 RAL-894 462 chr2L 17273185 17273228 chr2L 17277975 17277982 F-element 7 4791 1.5 3.0 2.2 2.2 4797 chr2L 17273185 intergenic not near genes chr2L 17275584 intergenic not near genes chr2L 17277982 intergenic not near genes chr2L_7_17275001 chr2L_17275001 RAL-894 463 chr2L 17335523 17335536 chr2L 17336724 17336731 1360 5 1200 1.0 4.5 2.8 1.3 1208 chr2L 17335523 intergenic not near genes chr2L 17336127 intergenic not near genes chr2L 17336731 intergenic not near genes chr2L_5_17335001 chr2L_17335001 RAL-894 464 chr2L 17344859 17344908 chr2L 17344956 17345005 13 96 1.5 3.5 2.5 3.7 146 chr2L 17344859 intergenic not near genes chr2L 17344932 intergenic not near genes chr2L 17345005 intergenic not near genes chr2L_13_17340001 chr2L_17340001 RAL-894 465 chr2L 17351931 17351952 chr2L 17352053 17352074 10 121 2.0 8.0 5.0 1.7 143 chr2L 17351931 intergenic not near genes chr2L 17352002 intergenic not near genes chr2L 17352074 intergenic not near genes chr2L_10_17350001 chr2L_17350001 RAL-894 466 chr2L 17360007 17360041 chr2L 17360205 17360239 7 198 3.5 0.0 1.8 2.5 232 chr2L 17360007 intergenic not near genes chr2L 17360123 intergenic not near genes chr2L 17360239 intergenic not near genes chr2L_7_17360001 chr2L_17360001 RAL-894 467 chr2L 17372327 17372368 chr2L 17372427 17372440 7 90 1.5 6.0 3.8 1.5 113 chr2L 17372327 intron Lrch - chr2L 17372384 intron Lrch - chr2L 17372440 intron Lrch - chr2L_7_17370001 chr2L_17370001 RAL-894 468 chr2L 17425749 17425796 chr2L 17425896 17425942 15 146 2.5 5.0 3.8 3.1 193 chr2L 17425749 intron Dif - chr2L 17425846 intron Dif - chr2L 17425942 intron Dif - chr2L_15_17425001 chr2L_17425001 RAL-894 469 chr2L 17432013 17432022 chr2L 17432140 17432149 1360 4 127 0.0 6.0 3.0 1.0 136 chr2L 17432013 intron Dif - chr2L 17432081 intron Dif - chr2L 17432149 intron Dif - chr2L_4_17430001 chr2L_17430001 RAL-894 470 chr2L 17432023 17432035 chr2L 17432136 17432162 1360 6 124 0.0 5.0 2.5 1.7 139 chr2L 17432023 intron Dif - chr2L 17432092 intron Dif - chr2L 17432162 intron Dif - chr2L_6_17430001 chr2L_17430001 RAL-894 471 chr2L 17511615 17511660 chr2L 17511777 17511822 7 162 1.0 0.5 0.8 3.9 207 chr2L 17511615 intron Dhc36C + chr2L 17511718 intron Dhc36C + chr2L 17511822 exon Dhc36C + chr2L_7_17510001 chr2L_17510001 RAL-894 472 chr2L 17554046 17554101 chr2L 17554142 17554197 12 90 3.5 1.5 2.5 3.4 151 chr2L 17554046 intergenic CG7094 - chr2L 17554122 intergenic CG7094 - chr2L 17554197 intergenic CG7094 - chr2L_12_17550001 chr2L_17550001 RAL-894 473 chr2L 17564135 17564185 chr2L 17564239 17564289 7 101 1.5 7.0 4.2 1.3 154 chr2L 17564135 intergenic not near genes chr2L 17564212 intergenic not near genes chr2L 17564289 intergenic not near genes chr2L_7_17560001 chr2L_17560001 RAL-894 474 chr2L 17565121 17565155 chr2L 17565234 17565263 7 110 3.5 8.0 5.8 1.0 142 chr2L 17565121 intergenic not near genes chr2L 17565192 intergenic not near genes chr2L 17565263 intergenic not near genes chr2L_7_17565001 chr2L_17565001 RAL-894 475 chr2L 17687499 17687523 chr2L 17692264 17692288 F-element 7 4764 3.5 4.0 3.8 1.5 4789 chr2L 17687499 intron CadN - chr2L 17689894 intron CadN - chr2L 17692288 intron CadN - chr2L_7_17685001 chr2L_17685001 RAL-894 476 chr2L 17723780 17723801 chr2L 17723883 17723914 8 109 3.0 3.0 3.0 2.0 134 chr2L 17723780 intron CadN - chr2L 17723847 intron CadN - chr2L 17723914 intron CadN - chr2L_8_17720001 chr2L_17720001 RAL-894 477 chr2L 17741137 17741172 chr2L 17741241 17741276 6 103 7.0 3.0 5.0 1.0 139 chr2L 17741137 intron CadN - chr2L 17741206 intron CadN - chr2L 17741276 intron CadN - chr2L_6_17740001 chr2L_17740001 RAL-894 478 chr2L 17796008 17796033 chr2L 17796109 17796134 5 101 2.5 4.0 3.2 1.2 126 chr2L 17796008 intron CadN2 - chr2L 17796071 intron CadN2 - chr2L 17796134 intron CadN2 - chr2L_5_17795001 chr2L_17795001 RAL-894 479 chr2L 17819906 17819955 chr2L 17825128 17825157 copia 7 5215 2.0 1.5 1.8 2.5 5251 chr2L 17819906 intron CadN2 - chr2L 17822532 intron CadN2 - chr2L 17825157 intron CadN2 - chr2L_7_17820001 chr2L_17820001 RAL-894 480 chr2L 17825619 17825670 chr2L 17825780 17825799 14 152 2.5 4.5 3.5 3.1 180 chr2L 17825619 intron CadN2 - chr2L 17825709 intron CadN2 - chr2L 17825799 intron CadN2 - chr2L_14_17825001 chr2L_17825001 RAL-894 481 chr2L 17832917 17832946 chr2L 17833015 17833044 4 98 2.5 1.0 1.8 1.4 127 chr2L 17832917 intron CadN2 - chr2L 17832980 intron CadN2 - chr2L 17833044 intron CadN2 - chr2L_4_17830001 chr2L_17830001 RAL-894 482 chr2L 17852689 17852741 chr2L 17852800 17852851 6 105 3.0 2.0 2.5 1.7 162 chr2L 17852689 intron CadN2 - chr2L 17852770 intron CadN2 - chr2L 17852851 intron CadN2 - chr2L_6_17850001 chr2L_17850001 RAL-894 483 chr2L 17911939 17911976 chr2L 17914140 17914182 pogo 7 2201 3.5 4.5 4.0 1.4 2243 chr2L 17911939 intergenic not near genes chr2L 17913060 intergenic not near genes chr2L 17914182 intergenic CG43271 - chr2L_7_17910001 chr2L_17910001 RAL-894 484 chr2L 17951925 17951979 chr2L 17953412 17953461 hobo 17 1483 5.0 1.5 3.2 4.0 1536 chr2L 17951925 intergenic CR44398 -,CR44397 - chr2L 17952693 intergenic not near genes chr2L 17953461 intergenic not near genes chr2L_17_17950001 chr2L_17950001 RAL-894 485 chr2L 17988361 17988408 chr2L 17991939 17991986 9 3580 26.5 19.5 23.0 0.4 3625 chr2L 17988361 3` UTR CG5681 + chr2L 17990174 intergenic Prosbeta5R2 + chr2L 17991986 intergenic Prosbeta5R2 + chr2L_9_17990001 chr2L_17990001 RAL-894 486 chr2L 18040706 18040758 chr2L 18040815 18040857 13 103 3.0 2.0 2.5 3.7 151 chr2L 18040706 intron rdo + chr2L 18040782 intron rdo + chr2L 18040857 intron rdo + chr2L_13_18040001 chr2L_18040001 RAL-894 487 chr2L 18047015 18047055 chr2L 18047113 18047157 10 92 3.5 3.0 3.2 2.4 142 chr2L 18047015 intron rdo + chr2L 18047086 intron rdo + chr2L 18047157 intron rdo + chr2L_10_18045001 chr2L_18045001 RAL-894 488 chr2L 18051859 18051909 chr2L 18061025 18061070 roo 10 9162 4.0 3.5 3.8 2.1 9211 chr2L 18051859 intron rdo + chr2L 18056464 intron rdo + chr2L 18061070 intron rdo + chr2L_10_18055001 chr2L_18055001 RAL-894 489 chr2L 18095569 18095580 chr2L 18095670 18095681 8 100 7.5 6.0 6.8 1.0 112 chr2L 18095569 intergenic not near genes chr2L 18095625 intergenic not near genes chr2L 18095681 intergenic not near genes chr2L_8_18095001 chr2L_18095001 RAL-894 490 chr2L 18111231 18111254 chr2L 18111342 18111347 5 105 2.5 7.5 5.0 0.8 116 chr2L 18111231 intergenic not near genes chr2L 18111289 intergenic not near genes chr2L 18111347 intergenic not near genes chr2L_5_18110001 chr2L_18110001 RAL-894 491 chr2L 18148823 18148849 chr2L 18148928 18148965 7 107 4.0 2.0 3.0 1.8 142 chr2L 18148823 intron Socs36E - chr2L 18148894 intron Socs36E - chr2L 18148965 intron Socs36E - chr2L_7_18145001 chr2L_18145001 RAL-894 492 chr2L 18148850 18148858 chr2L 18148925 18148973 5 107 2.5 2.0 2.2 1.6 123 chr2L 18148850 intron Socs36E - chr2L 18148912 intron Socs36E - chr2L 18148973 intron Socs36E - chr2L_5_18145001 chr2L_18145001 RAL-894 493 chr2L 18254792 18254839 chr2L 18254912 18254959 16 119 3.0 1.5 2.2 5.0 167 chr2L 18254792 intron CG42750 - chr2L 18254876 intron CG42750 - chr2L 18254959 intron CG42750 - chr2L_16_18250001 chr2L_18250001 RAL-894 494 chr2L 18264049 18264093 chr2L 18264140 18264190 14 96 3.5 2.0 2.8 3.7 141 chr2L 18264049 intron CG42750 - chr2L 18264120 intron CG42750 - chr2L 18264190 intron CG42750 - chr2L_14_18260001 chr2L_18260001 RAL-894 495 chr2L 18274023 18274062 chr2L 18274129 18274148 11 103 4.0 4.5 4.2 2.1 125 chr2L 18274023 intron CG42750 - chr2L 18274086 intron CG42750 - chr2L 18274148 intron CG42750 - chr2L_11_18270001 chr2L_18270001 RAL-894 496 chr2L 18303954 18304006 chr2L 18304065 18304098 13 109 2.5 5.0 3.8 2.7 144 chr2L 18303954 intergenic not near genes chr2L 18304026 intergenic not near genes chr2L 18304098 intergenic not near genes chr2L_13_18300001 chr2L_18300001 RAL-894 497 chr2L 18408012 18408048 chr2L 18412815 18412852 Doc 9 4801 4.0 5.5 4.8 1.6 4840 chr2L 18408012 intergenic not near genes chr2L 18410432 intergenic not near genes chr2L 18412852 intergenic not near genes chr2L_9_18410001 chr2L_18410001 RAL-894 498 chr2L 18418877 18418921 chr2L 18418979 18419023 9 100 1.5 3.5 2.5 2.6 146 chr2L 18418877 intergenic not near genes chr2L 18418950 intergenic not near genes chr2L 18419023 intergenic not near genes chr2L_9_18415001 chr2L_18415001 RAL-894 499 chr2L 18423839 18423867 chr2L 18423945 18423978 6 107 4.5 7.5 6.0 0.9 139 chr2L 18423839 intergenic not near genes chr2L 18423908 intergenic not near genes chr2L 18423978 intergenic not near genes chr2L_6_18420001 chr2L_18420001 RAL-894 500 chr2L 18546223 18546235 chr2L 18546316 18546340 7 103 5.0 7.0 6.0 1.0 117 chr2L 18546223 intron Pde11 - chr2L 18546282 intron Pde11 - chr2L 18546340 intron Pde11 - chr2L_7_18545001 chr2L_18545001 RAL-894 501 chr2L 18546239 18546256 chr2L 18546311 18546362 5 93 2.5 6.0 4.2 1.0 123 chr2L 18546239 intron Pde11 - chr2L 18546300 intron Pde11 - chr2L 18546362 intron Pde11 - chr2L_5_18545001 chr2L_18545001 RAL-894 502 chr2L 18589526 18589545 chr2L 18594060 18594074 4 4528 23.5 3.5 13.5 0.3 4548 chr2L 18589526 intron Pde11 - chr2L 18591800 exon CG15160 + chr2L 18594074 exon CG15160 + chr2L_4_18590001 chr2L_18590001 RAL-894 503 chr2L 18816731 18816766 chr2L 18816871 18816896 12 142 4.0 7.5 5.8 1.8 165 chr2L 18816731 intergenic not near genes chr2L 18816814 intergenic not near genes chr2L 18816896 intergenic not near genes chr2L_12_18815001 chr2L_18815001 RAL-894 504 chr2L 18876845 18876882 chr2L 18876943 18876979 12 98 2.5 2.5 2.5 3.4 134 chr2L 18876845 intron tup - chr2L 18876912 intron tup - chr2L 18876979 intron tup - chr2L_12_18875001 chr2L_18875001 RAL-894 505 chr2L 18898384 18898423 chr2L 18898486 18898499 8 98 1.5 0.0 0.8 4.4 115 chr2L 18898384 intergenic not near genes chr2L 18898442 intergenic not near genes chr2L 18898499 intergenic not near genes chr2L_8_18895001 chr2L_18895001 RAL-894 506 chr2L 18902612 18902656 chr2L 18902904 18902939 10 294 2.0 2.5 2.2 3.1 327 chr2L 18902612 intergenic not near genes chr2L 18902776 intergenic not near genes chr2L 18902939 intergenic not near genes chr2L_10_18900001 chr2L_18900001 RAL-894 507 chr2L 18926581 18926593 chr2L 18926691 18926720 9 123 1.0 0.0 0.5 6.0 139 chr2L 18926581 intron ssp3 - chr2L 18926650 intron ssp3 - chr2L 18926720 intron ssp3 - chr2L_9_18925001 chr2L_18925001 RAL-894 508 chr2L 19147378 19147400 chr2L 19154403 19154446 297 8 7039 3.5 5.5 4.5 1.5 7068 chr2L 19147378 intron brat + chr2L 19150912 intron brat + chr2L 19154446 intron brat + chr2L_8_19150001 chr2L_19150001 RAL-894 509 chr2L 19163375 19163396 chr2L 19163475 19163475 6 93 5.0 5.0 5.0 1.0 100 chr2L 19163375 intron brat + chr2L 19163425 intron brat + chr2L 19163475 intron brat + chr2L_6_19160001 chr2L_19160001 RAL-894 510 chr2L 19189702 19189753 chr2L 19189800 19189851 17 94 1.5 4.0 2.8 4.5 149 chr2L 19189702 3` UTR pigeon + chr2L 19189776 3` UTR pigeon + chr2L 19189851 3` UTR pigeon + chr2L_17_19185001 chr2L_19185001 RAL-894 511 chr2L 19189961 19190003 chr2L 19190122 19190170 7 169 1.5 2.5 2.0 2.3 209 chr2L 19189961 intergenic pigeon +,drl + chr2L 19190066 intergenic pigeon +,drl + chr2L 19190170 intergenic drl +,pigeon + chr2L_7_19190001 chr2L_19190001 RAL-894 512 chr2L 19209595 19209649 chr2L 19209700 19209744 15 100 2.0 2.5 2.2 4.7 149 chr2L 19209595 intergenic not near genes chr2L 19209670 intergenic not near genes chr2L 19209744 intergenic not near genes chr2L_15_19205001 chr2L_19205001 RAL-894 513 chr2L 19227076 19227092 chr2L 19227187 19227188 10 108 8.0 8.0 8.0 1.1 112 chr2L 19227076 intergenic not near genes chr2L 19227132 intergenic not near genes chr2L 19227188 intergenic not near genes chr2L_10_19225001 chr2L_19225001 RAL-894 514 chr2L 19331110 19331153 chr2L 19331227 19331230 5 103 4.5 5.5 5.0 0.8 120 chr2L 19331110 intergenic not near genes chr2L 19331170 intergenic not near genes chr2L 19331230 intergenic not near genes chr2L_5_19330001 chr2L_19330001 RAL-894 515 chr2L 19345010 19345044 chr2L 19357223 19357247 blood 8 12217 1.5 1.5 1.5 3.2 12237 chr2L 19345010 intron dnt - chr2L 19351128 intron dnt - chr2L 19357247 intron dnt - chr2L_8_19350001 chr2L_19350001 RAL-894 516 chr2L 19357546 19357566 chr2L 19357637 19357675 4 105 5.5 6.0 5.8 0.6 129 chr2L 19357546 intron dnt - chr2L 19357610 intron dnt - chr2L 19357675 intron dnt - chr2L_4_19355001 chr2L_19355001 RAL-894 517 chr2L 19375674 19375713 chr2L 19375793 19375826 4 116 2.5 2.5 2.5 1.1 152 chr2L 19375674 intergenic not near genes chr2L 19375750 intergenic not near genes chr2L 19375826 intergenic not near genes chr2L_4_19375001 chr2L_19375001 RAL-894 518 chr2L 19380499 19380509 chr2L 19380599 19380609 5 98 3.0 7.5 5.2 0.8 110 chr2L 19380499 intergenic CG17350 + chr2L 19380554 intergenic CG17350 + chr2L 19380609 intergenic CG17350 + chr2L_5_19380001 chr2L_19380001 RAL-894 519 chr2L 19380510 19380529 chr2L 19380597 19380628 5 91 0.5 7.5 4.0 1.0 118 chr2L 19380510 intergenic CG17350 + chr2L 19380569 intergenic CG17350 + chr2L 19380628 intergenic CG17350 + chr2L_5_19380001 chr2L_19380001 RAL-894 520 chr2L 19405598 19405626 chr2L 19405708 19405735 15 109 5.5 2.5 4.0 3.0 137 chr2L 19405598 intron Pax - chr2L 19405666 intron Pax - chr2L 19405735 intron Pax - chr2L_15_19405001 chr2L_19405001 RAL-894 521 chr2L 19407697 19407738 chr2L 19407914 19407918 11 211 3.5 4.0 3.8 2.3 221 chr2L 19407697 intron Pax - chr2L 19407808 intron Pax - chr2L 19407918 intron Pax - chr2L_11_19405001 chr2L_19405001 RAL-894 522 chr2L 19437504 19437531 chr2L 19437616 19437643 9 112 4.0 1.0 2.5 2.6 139 chr2L 19437504 intron CG10237 - chr2L 19437574 intron CG10237 - chr2L 19437643 intron CG10237 - chr2L_9_19435001 chr2L_19435001 RAL-894 523 chr2L 19438504 19438513 chr2L 19438606 19438618 4 104 6.0 9.0 7.5 0.5 114 chr2L 19438504 intron CG10237 - chr2L 19438561 intron CG10237 - chr2L 19438618 intron CG10237 - chr2L_4_19435001 chr2L_19435001 RAL-894 524 chr2L 19544616 19544625 chr2L 19544672 19544684 4 60 3.0 6.0 4.5 0.7 68 chr2L 19544616 exon ref(2)P + chr2L 19544650 exon ref(2)P + chr2L 19544684 exon ref(2)P + chr2L_4_19540001 chr2L_19540001 RAL-894 525 chr2L 19562510 19562559 chr2L 19562611 19562659 7 94 0.0 2.5 1.2 3.2 149 chr2L 19562510 exon Tep5 + chr2L 19562584 intron Tep5 + chr2L 19562659 exon Tep5 + chr2L_7_19560001 chr2L_19560001 RAL-894 526 chr2L 19652552 19652601 chr2L 19674005 19674055 opus 16 21451 3.5 5.5 4.5 2.9 21503 chr2L 19652552 intron Lar + chr2L 19663304 intron Lar + chr2L 19674055 intron Lar + chr2L_16_19660001 chr2L_19660001 RAL-894 527 chr2L 19703522 19703567 chr2L 19712677 19712708 roo 12 9149 7.5 1.0 4.2 2.3 9186 chr2L 19703522 intron Lar + chr2L 19708115 intron Lar + chr2L 19712708 intron Lar + chr2L_12_19705001 chr2L_19705001 RAL-894 528 chr2L 19712697 19712717 chr2L 19712773 19712816 4 88 2.0 5.0 3.5 0.9 119 chr2L 19712697 intron Lar + chr2L 19712756 intron Lar + chr2L 19712816 intron Lar + chr2L_4_19710001 chr2L_19710001 RAL-894 529 chr2L 19762790 19762834 chr2L 19763051 19763096 pogo 6 262 1.0 5.5 3.2 1.4 306 chr2L 19762790 5` UTR fbp - chr2L 19762943 intron fbp - chr2L 19763096 intron fbp - chr2L_6_19760001 chr2L_19760001 RAL-894 530 chr2L 19821880 19821887 chr2L 19821976 19821983 5 96 4.0 10.0 7.0 0.6 103 chr2L 19821880 intron sick + chr2L 19821932 intron sick + chr2L 19821983 intron sick + chr2L_5_19820001 chr2L_19820001 RAL-894 531 chr2L 19837259 19837309 chr2L 19837359 19837391 9 94 2.0 2.0 2.0 3.0 132 chr2L 19837259 intron sick + chr2L 19837325 intron sick + chr2L 19837391 intron sick + chr2L_9_19835001 chr2L_19835001 RAL-894 532 chr2L 19947691 19947732 chr2L 19947796 19947837 5 106 1.0 2.5 1.8 1.8 146 chr2L 19947691 intron sick + chr2L 19947764 intron sick + chr2L 19947837 intron sick + chr2L_5_19945001 chr2L_19945001 RAL-894 533 chr2L 19950984 19951004 chr2L 19951087 19951107 8 100 4.5 10.0 7.2 1.0 123 chr2L 19950984 intron sick + chr2L 19951046 intron sick + chr2L 19951107 intron sick + chr2L_8_19950001 chr2L_19950001 RAL-894 534 chr2L 19951007 19951017 chr2L 19951070 19951113 5 85 3.5 7.5 5.5 0.8 106 chr2L 19951007 intron sick + chr2L 19951060 intron sick + chr2L 19951113 intron sick + chr2L_5_19950001 chr2L_19950001 RAL-894 535 chr2L 19998016 19998059 chr2L 19998125 19998139 4 101 1.0 0.5 0.8 2.2 123 chr2L 19998016 intron CG43861 - chr2L 19998078 intron CG43861 - chr2L 19998139 intron CG43861 - chr2L_4_19995001 chr2L_19995001 RAL-894 536 chr2L 20005858 20005887 chr2L 20010948 20010983 flea 13 5095 4.0 3.0 3.5 2.9 5125 chr2L 20005858 intron CG43861 - chr2L 20008420 intron CG43861 - chr2L 20010983 intron CG43861 - chr2L_13_20005001 chr2L_20005001 RAL-894 537 chr2L 20124336 20124352 chr2L 20124405 20124450 6 93 5.5 2.0 3.8 1.2 114 chr2L 20124336 intergenic not near genes chr2L 20124393 intergenic not near genes chr2L 20124450 intergenic not near genes chr2L_6_20120001 chr2L_20120001 RAL-894 538 chr2L 20272093 20272143 chr2L 20282824 20282864 copia 9 10724 4.0 2.0 3.0 2.2 10771 chr2L 20272093 intergenic not near genes chr2L 20277478 intergenic not near genes chr2L 20282864 intergenic not near genes chr2L_9_20275001 chr2L_20275001 RAL-894 539 chr2L 20296488 20296538 chr2L 20296589 20296599 7 95 0.0 1.0 0.5 4.7 111 chr2L 20296488 intergenic CR43414 - chr2L 20296544 intergenic CR43414 - chr2L 20296599 intergenic CR43414 - chr2L_7_20295001 chr2L_20295001 RAL-894 540 chr2L 20303168 20303187 chr2L 20310656 20310675 blood 6 7486 0.5 9.0 4.8 1.0 7507 chr2L 20303168 intergenic not near genes chr2L 20306922 intergenic not near genes chr2L 20310675 intergenic not near genes chr2L_6_20305001 chr2L_20305001 RAL-894 541 chr2L 20310881 20310920 chr2L 20310974 20310993 5 93 0.0 5.0 2.5 1.4 112 chr2L 20310881 intergenic spir + chr2L 20310937 intergenic spir + chr2L 20310993 intergenic spir + chr2L_5_20310001 chr2L_20310001 RAL-894 542 chr2L 20320022 20320065 chr2L 20320146 20320204 9 134 4.0 0.0 2.0 3.0 182 chr2L 20320022 intron spir + chr2L 20320113 intron spir + chr2L 20320204 intron spir + chr2L_9_20320001 chr2L_20320001 RAL-894 543 chr2L 20372198 20372255 chr2L 20372468 20372516 pogo 9 268 0.5 1.5 1.0 4.5 318 chr2L 20372198 intergenic Ugt37a1 - chr2L 20372357 intergenic Ugt37a1 - chr2L 20372516 exon Ugt37a1 - chr2L_9_20370001 chr2L_20370001 RAL-894 544 chr2L 20399750 20399764 chr2L 20400011 20400025 6 261 0.5 3.5 2.0 2.0 275 chr2L 20399750 intron CG10947 - chr2L 20399888 intron CG10947 - chr2L 20400025 intron CG10947 - chr2L_6_20395001 chr2L_20395001 RAL-894 545 chr2L 20407778 20407798 chr2L 20412925 20412950 flea 4 5150 7.5 1.0 4.2 0.8 5172 chr2L 20407778 intron CG10947 - chr2L 20410364 intron CG10947 - chr2L 20412950 intron CG10947 - chr2L_4_20410001 chr2L_20410001 RAL-894 546 chr2L 20485058 20485105 chr2L 20485176 20485223 8 113 1.0 2.5 1.8 2.9 165 chr2L 20485058 intergenic CR44980 - chr2L 20485140 intergenic CR44980 - chr2L 20485223 intergenic not near genes chr2L_8_20485001 chr2L_20485001 RAL-894 547 chr2L 20498671 20498707 chr2L 20498790 20498801 8 109 1.0 6.0 3.5 1.8 130 chr2L 20498671 intergenic not near genes chr2L 20498736 intergenic not near genes chr2L 20498801 intergenic not near genes chr2L_8_20495001 chr2L_20495001 RAL-894 548 chr2L 20512532 20512547 chr2L 20512656 20512657 4 128 3.5 3.0 3.2 1.0 125 chr2L 20512532 intergenic not near genes chr2L 20512594 intergenic not near genes chr2L 20512657 intergenic not near genes chr2L_4_20510001 chr2L_20510001 RAL-894 549 chr2L 20568655 20568681 chr2L 20569051 20569086 X-element 7 405 4.5 3.0 3.8 1.5 431 chr2L 20568655 intron CR45347 + chr2L 20568870 intron CR45347 + chr2L 20569086 intron CR45347 + chr2L_7_20565001 chr2L_20565001 RAL-894 550 chr2L 20576199 20576248 chr2L 20583687 20583697 blood 12 7474 6.5 0.5 3.5 2.7 7498 chr2L 20576199 intergenic CR45347 + chr2L 20579948 intergenic not near genes chr2L 20583697 3` UTR CR44909 - chr2L_12_20575001 chr2L_20575001 RAL-894 551 chr2L 20602717 20602749 chr2L 20602825 20602857 5 108 1.0 0.5 0.8 2.8 140 chr2L 20602717 intron CR44909 - chr2L 20602787 intron CR44909 - chr2L 20602857 intron CR44909 - chr2L_5_20600001 chr2L_20600001 RAL-894 552 chr2L 20626109 20626133 chr2L 20626216 20626259 9 121 1.0 5.5 3.2 2.1 150 chr2L 20626109 3` UTR CR44909 - chr2L 20626184 3` UTR CR44909 - chr2L 20626259 intergenic CR44909 - chr2L_9_20625001 chr2L_20625001 RAL-894 553 chr2L 20628171 20628209 chr2L 20628405 20628442 5 234 2.0 3.5 2.8 1.3 271 chr2L 20628171 intergenic not near genes chr2L 20628306 intergenic not near genes chr2L 20628442 intergenic not near genes chr2L_5_20625001 chr2L_20625001 RAL-894 554 chr2L 20835788 20835831 chr2L 20836525 20836568 Quasimodo 9 736 8.0 2.0 5.0 1.5 780 chr2L 20835788 5` UTR Oseg5 - chr2L 20836178 intergenic Oseg5 -,Spn38F - chr2L 20836568 intergenic Spn38F - chr2L_9_20835001 chr2L_20835001 RAL-894 555 chr2L 20862582 20862593 chr2L 20862699 20862710 5 117 0.0 11.0 5.5 0.8 128 chr2L 20862582 intergenic not near genes chr2L 20862646 intergenic not near genes chr2L 20862710 intergenic not near genes chr2L_5_20860001 chr2L_20860001 RAL-894 556 chr2L 20891520 20891538 chr2L 20896641 20896659 jockey 8 5119 2.5 4.0 3.2 1.9 5139 chr2L 20891520 intron,intron CG43739 -,sky - chr2L 20894090 intron,intron CG43739 -,sky - chr2L 20896659 intron,intron CG43739 -,sky - chr2L_8_20890001 chr2L_20890001 RAL-894 557 chr2L 20911013 20911060 chr2L 20911104 20911155 22 92 4.5 2.5 3.5 4.9 142 chr2L 20911013 intron,intron CG43739 -,sky - chr2L 20911084 intron,intron CG43739 -,sky - chr2L 20911155 intron,intron CG43739 -,sky - chr2L_22_20910001 chr2L_20910001 RAL-894 558 chr2L 20934583 20934631 chr2L 20934798 20934846 15 214 5.5 5.0 5.2 2.4 263 chr2L 20934583 intergenic CG9270 - chr2L 20934714 intergenic not near genes chr2L 20934846 intergenic not near genes chr2L_15_20930001 chr2L_20930001 RAL-894 559 chr2L 20946932 20946961 chr2L 20947036 20947047 7 103 6.0 2.5 4.2 1.3 115 chr2L 20946932 intergenic CR44606 - chr2L 20946990 intergenic CR44606 - chr2L 20947047 intergenic CR44606 - chr2L_7_20945001 chr2L_20945001 RAL-894 560 chr2L 20967062 20967107 chr2L 20967168 20967202 13 104 3.5 2.0 2.8 3.4 140 chr2L 20967062 3` UTR CG42238 - chr2L 20967132 3` UTR CG42238 - chr2L 20967202 3` UTR CG42238 - chr2L_13_20965001 chr2L_20965001 RAL-894 561 chr2L 20976626 20976669 chr2L 20981458 20981474 X-element 6 4827 3.0 4.0 3.5 1.3 4848 chr2L 20976626 intron CG42238 - chr2L 20979050 intron CG42238 - chr2L 20981474 intron CG42238 - chr2L_6_20975001 chr2L_20975001 RAL-894 562 chr2L 20984399 20984427 chr2L 20984685 20984733 5 300 0.0 1.5 0.8 2.8 334 chr2L 20984399 intron CG42238 - chr2L 20984566 intron CG42238 - chr2L 20984733 intron CG42238 - chr2L_5_20980001 chr2L_20980001 RAL-894 563 chr2L 21041125 21041164 chr2L 21049398 21049445 Tirant 8 8272 7.5 6.5 7.0 1.0 8320 chr2L 21041125 intron CG42238 - chr2L 21045285 intron CG42238 - chr2L 21049445 intron CG42238 - chr2L_8_21045001 chr2L_21045001 RAL-894 564 chr2L 21074901 21074951 chr2L 21075012 21075062 15 110 7.0 3.0 5.0 2.5 161 chr2L 21074901 intergenic not near genes chr2L 21074982 intergenic tadr + chr2L 21075062 intergenic tadr + chr2L_15_21070001 chr2L_21070001 RAL-894 565 chr2L 21110632 21110685 chr2L 21110737 21110787 21 104 3.0 4.0 3.5 4.7 155 chr2L 21110632 intron Nhe2 + chr2L 21110710 intron Nhe2 + chr2L 21110787 intron Nhe2 + chr2L_21_21110001 chr2L_21110001 RAL-894 566 chr2L 21215658 21215686 chr2L 21215732 21215781 12 83 6.5 4.0 5.2 1.9 123 chr2L 21215658 intron Atg18b - chr2L 21215720 intron Atg18b - chr2L 21215781 intron Atg18b - chr2L_12_21215001 chr2L_21215001 RAL-894 567 chr2L 21246511 21246538 chr2L 21246604 21246633 10 102 3.5 3.0 3.2 2.4 122 chr2L 21246511 intron Hr39 + chr2L 21246572 intron Hr39 + chr2L 21246633 intron Hr39 + chr2L_10_21245001 chr2L_21245001 RAL-894 568 chr2L 21286585 21286627 chr2L 21286683 21286719 22 95 8.0 8.5 8.2 2.4 134 chr2L 21286585 exon Mio - chr2L 21286652 intron Mio - chr2L 21286719 intron Mio - chr2L_22_21285001 chr2L_21285001 RAL-894 569 chr2L 21307453 21307498 chr2L 21307555 21307592 11 96 2.0 4.5 3.2 2.6 139 chr2L 21307453 intron Mio - chr2L 21307522 intron Mio - chr2L 21307592 intron Mio - chr2L_11_21305001 chr2L_21305001 RAL-894 570 chr2L 21323910 21323919 chr2L 21323998 21324011 5 94 0.0 9.5 4.8 0.9 101 chr2L 21323910 intergenic not near genes chr2L 21323960 intergenic not near genes chr2L 21324011 intergenic not near genes chr2L_5_21320001 chr2L_21320001 RAL-894 571 chr2L 21347531 21347579 chr2L 21355023 21355064 blood 20 7486 7.5 4.5 6.0 2.9 7533 chr2L 21347531 intron Tsp39D + chr2L 21351298 intron Tsp39D + chr2L 21355064 intron Tsp39D + chr2L_20_21350001 chr2L_21350001 RAL-894 572 chr2L 21377383 21377435 chr2L 21377480 21377487 16 94 3.5 4.0 3.8 3.3 104 chr2L 21377383 3` UTR CG8665 + chr2L 21377435 3` UTR CG8665 + chr2L 21377487 3` UTR CG8665 + chr2L_16_21375001 chr2L_21375001 RAL-894 573 chr2L 21597035 21597063 chr2L 21604799 21604824 roo 10 7760 0.0 8.0 4.0 2.0 7789 chr2L 21597035 intergenic not near genes chr2L 21600930 intergenic not near genes chr2L 21604824 intergenic not near genes chr2L_10_21600001 chr2L_21600001 RAL-894 574 chr2L 21691656 21691668 chr2L 21691752 21691764 7 96 2.5 7.5 5.0 1.2 108 chr2L 21691656 intron CG31619 + chr2L 21691710 intron CG31619 + chr2L 21691764 intron CG31619 + chr2L_7_21690001 chr2L_21690001 RAL-894 575 chr2L 21691808 21691836 chr2L 21698298 21698326 Burdock 11 6489 7.0 0.0 3.5 2.4 6518 chr2L 21691808 intron CG31619 + chr2L 21695067 intron CG31619 + chr2L 21698326 intron CG31619 + chr2L_11_21695001 chr2L_21695001 RAL-894 576 chr2L 21806210 21806241 chr2L 21806333 21806355 8 115 4.5 4.5 4.5 1.5 145 chr2L 21806210 intergenic not near genes chr2L 21806282 intergenic not near genes chr2L 21806355 intergenic not near genes chr2L_8_21805001 chr2L_21805001 RAL-894 577 chr2L 21806245 21806258 chr2L 21806327 21806381 4 113 3.0 4.0 3.5 0.9 136 chr2L 21806245 intergenic not near genes chr2L 21806313 intergenic not near genes chr2L 21806381 intergenic not near genes chr2L_4_21805001 chr2L_21805001 RAL-894 578 chr2L 21981683 21981709 chr2L 21990868 21990881 roo 7 9182 3.0 6.5 4.8 1.2 9198 chr2L 21981683 exon CG2528 - chr2L 21986282 intron CG2528 - chr2L 21990881 exon CG2528 - chr2L_7_21985001 chr2L_21985001 RAL-894 579 chr2L 22001632 22001673 chr2L 22001726 22001769 14 95 3.5 4.5 4.0 2.8 137 chr2L 22001632 intergenic not near genes chr2L 22001700 intergenic not near genes chr2L 22001769 intergenic not near genes chr2L_14_22000001 chr2L_22000001 RAL-894 580 chr2L 22007911 22007946 chr2L 22008013 22008047 6 102 4.0 1.0 2.5 1.7 136 chr2L 22007911 intergenic not near genes chr2L 22007979 intergenic not near genes chr2L 22008047 intergenic not near genes chr2L_6_22005001 chr2L_22005001 RAL-894 581 chr2L 22025812 22025850 chr2L 22025911 22025949 6 94 3.5 5.0 4.2 1.2 137 chr2L 22025812 intergenic tio + chr2L 22025880 intergenic tio + chr2L 22025949 intergenic tio + chr2L_6_22025001 chr2L_22025001 RAL-894 582 chr2L 22101469 22101506 chr2L 22101801 22101839 9 331 4.0 3.0 3.5 2.0 370 chr2L 22101469 intergenic not near genes chr2L 22101654 intergenic not near genes chr2L 22101839 intergenic not near genes chr2L_9_22100001 chr2L_22100001 RAL-894 583 chr2L 22258604 22258648 chr2L 22260751 22260795 G6 6 2147 3.5 2.5 3.0 1.5 2191 chr2L 22258604 intergenic Tif-IA + chr2L 22259700 intergenic not near genes chr2L 22260795 intergenic not near genes chr2L_6_22255001 chr2L_22255001 RAL-894 584 chr2L 22319143 22319186 chr2L 22319288 22319312 11 136 4.5 4.0 4.2 2.1 169 chr2L 22319143 intron CG17018 + chr2L 22319228 intron CG17018 + chr2L 22319312 intron CG17018 + chr2L_11_22315001 chr2L_22315001 RAL-894 585 chr2L 22325303 22325321 chr2L 22325389 22325402 4 90 6.0 3.0 4.5 0.7 99 chr2L 22325303 intron CG17018 + chr2L 22325352 intron CG17018 + chr2L 22325402 intron CG17018 + chr2L_4_22325001 chr2L_22325001 RAL-894 586 chr2L 22581961 22581990 chr2L 22583761 22583799 S-element 11 1808 6.0 5.0 5.5 1.7 1838 chr2L 22581961 intron CG17494 + chr2L 22582880 intron CG17494 + chr2L 22583799 intron CG17494 + chr2L_11_22580001 chr2L_22580001 RAL-894 587 chr2L 22679811 22679827 chr2L 22684582 22684606 F-element 4 4780 5.0 5.0 5.0 0.7 4795 chr2L 22679811 intron CG40006 - chr2L 22682208 intron CG40006 - chr2L 22684606 intron CG40006 - chr2L_4_22680001 chr2L_22680001 RAL-894 588 chr2L 22776401 22776450 chr2L 22778210 22778259 S-element 9 1808 3.0 4.5 3.8 1.9 1858 chr2L 22776401 intergenic not near genes chr2L 22777330 intergenic not near genes chr2L 22778259 intergenic not near genes chr2L_9_22775001 chr2L_22775001 RAL-894 589 chr2L 23169708 23169749 chr2L 23169935 23169983 10 230 4.0 2.0 3.0 2.5 275 chr2L 23169708 intron CG12567 - chr2L 23169846 intron CG12567 - chr2L 23169983 intron CG12567 - chr2L_10_23165001 chr2L_23165001 RAL-894 590 chr2R 529321 529354 chr2R 537955 537979 Max-element 6 8627 2.0 5.0 3.5 1.3 8658 chr2R 529321 intron CG40378 + chr2R 533650 intron CG40378 + chr2R 537979 intron CG40378 + chr2R_6_530001 chr2R_530001 RAL-894 591 chr2R 1082371 1082384 chr2R 1087129 1087175 Doc 6 4770 1.5 4.0 2.8 1.6 4804 chr2R 1082371 intron rl + chr2R 1084773 intron rl + chr2R 1087175 intron rl + chr2R_6_1080001 chr2R_1080001 RAL-894 592 chr2R 1090257 1090298 chr2R 1090371 1090386 10 111 3.0 3.0 3.0 2.5 129 chr2R 1090257 intron rl + chr2R 1090322 intron rl + chr2R 1090386 intron rl + chr2R_10_1090001 chr2R_1090001 RAL-894 593 chr2R 1320201 1320201 chr2R 11463556 11463556 invader1 4 10143355 20.5 16.0 18.2 0.2 10143355 chr2R 1320201 intergenic not near genes chr2R 6391878 intergenic not near genes chr2R 11463556 3` UTR E(Pc) + chr2R_4_6390001 chr2R_6390001 RAL-894 594 chr2R 1365882 1365895 chr2R 1365976 1366027 7 115 2.5 2.0 2.2 2.2 145 chr2R 1365882 intron l(2)41Ab + chr2R 1365954 intron l(2)41Ab + chr2R 1366027 intron l(2)41Ab + chr2R_7_1365001 chr2R_1365001 RAL-894 595 chr2R 1516587 1516601 chr2R 1521335 1521349 1731 12 4747 22.0 13.0 17.5 0.6 4762 chr2R 1516587 exon Maf1 - chr2R 1518968 intron Maf1 - chr2R 1521349 5` UTR Maf1 - chr2R_12_1515001 chr2R_1515001 RAL-894 596 chr2R 1755943 1755974 chr2R 1756066 1756108 5 127 1.5 1.5 1.5 2.0 165 chr2R 1755943 intron CG41520 + chr2R 1756026 intron CG41520 + chr2R 1756108 intron CG41520 + chr2R_5_1755001 chr2R_1755001 RAL-894 597 chr2R 2015126 2015163 chr2R 2015207 2015259 10 90 3.0 3.0 3.0 2.5 133 chr2R 2015126 intron CG17684 - chr2R 2015192 intron CG17684 - chr2R 2015259 intron CG17684 - chr2R_10_2015001 chr2R_2015001 RAL-894 598 chr2R 2498968 2499016 chr2R 2508132 2508153 roo 12 9160 5.0 5.0 5.0 2.0 9185 chr2R 2498968 intron MFS17 - chr2R 2503560 intron MFS17 - chr2R 2508153 intron MFS17 - chr2R_12_2500001 chr2R_2500001 RAL-894 599 chr2R 2508302 2508317 chr2R 2508445 2508470 4 153 5.5 3.0 4.2 0.8 168 chr2R 2508302 intron MFS17 - chr2R 2508386 intron MFS17 - chr2R 2508470 intron MFS17 - chr2R_4_2505001 chr2R_2505001 RAL-894 600 chr2R 1373050 1373063 chr2R 2589328 2589341 Cr1a 4 1216278 11.0 24.5 17.8 0.2 1216291 chr2R 1373050 intron l(2)41Ab + chr2R 1981196 intron CG17684 - chr2R 2589341 intergenic not near genes chr2R_4_1980001 chr2R_1980001 RAL-894 601 chr2R 3515275 3515307 chr2R 3515383 3515410 8 107 13.5 12.0 12.8 0.6 135 chr2R 3515275 intergenic not near genes chr2R 3515342 intergenic not near genes chr2R 3515410 intergenic not near genes chr2R_8_3515001 chr2R_3515001 RAL-894 602 chr2R 3532608 3532631 chr2R 3536071 3536089 Doc 5 3462 1.5 3.5 2.5 1.4 3481 chr2R 3532608 intergenic not near genes chr2R 3534348 intergenic not near genes chr2R 3536089 intergenic not near genes chr2R_5_3530001 chr2R_3530001 RAL-894 603 chr2R 4312934 4312972 chr2R 4313038 4313076 13 103 7.5 2.0 4.8 2.2 142 chr2R 4312934 intergenic not near genes chr2R 4313005 intergenic not near genes chr2R 4313076 intergenic not near genes chr2R_13_4310001 chr2R_4310001 RAL-894 604 chr2R 4312973 4312986 chr2R 4313034 4313090 8 89 4.0 2.0 3.0 2.0 117 chr2R 4312973 intergenic not near genes chr2R 4313032 intergenic not near genes chr2R 4313090 intergenic not near genes chr2R_8_4310001 chr2R_4310001 RAL-894 605 chr2R 4604554 4604575 chr2R 4604627 4604672 9 88 1.0 3.0 2.0 3.0 118 chr2R 4604554 intron p120ctn + chr2R 4604613 intron p120ctn + chr2R 4604672 intron p120ctn + chr2R_9_4600001 chr2R_4600001 RAL-894 606 chr2R 4622936 4622988 chr2R 4624115 4624129 1360 14 1170 3.5 6.5 5.0 2.3 1193 chr2R 4622936 intergenic CR44101 - chr2R 4623532 intergenic not near genes chr2R 4624129 intergenic not near genes chr2R_14_4620001 chr2R_4620001 RAL-894 607 chr2R 4624625 4624639 chr2R 4626550 4626553 Bica 4 1921 13.0 5.5 9.2 0.4 1928 chr2R 4624625 intergenic not near genes chr2R 4625589 intergenic not near genes chr2R 4626553 intergenic not near genes chr2R_4_4625001 chr2R_4625001 RAL-894 608 chr2R 4624640 4624671 chr2R 4626549 4626590 Bica 10 1920 7.5 5.5 6.5 1.3 1950 chr2R 4624640 intergenic not near genes chr2R 4625615 intergenic not near genes chr2R 4626590 intergenic not near genes chr2R_10_4625001 chr2R_4625001 RAL-894 609 chr2R 4634156 4634167 chr2R 4634240 4634253 4 92 8.5 4.5 6.5 0.5 97 chr2R 4634156 intergenic not near genes chr2R 4634204 intergenic not near genes chr2R 4634253 intergenic not near genes chr2R_4_4630001 chr2R_4630001 RAL-894 610 chr2R 4634177 4634180 chr2R 4634232 4634243 4 76 7.5 3.5 5.5 0.6 66 chr2R 4634177 intergenic not near genes chr2R 4634210 intergenic not near genes chr2R 4634243 intergenic not near genes chr2R_4_4630001 chr2R_4630001 RAL-894 611 chr2R 4702468 4702502 chr2R 4702618 4702645 7 152 4.5 4.0 4.2 1.3 177 chr2R 4702468 intron Nipped-B - chr2R 4702556 intron Nipped-B - chr2R 4702645 intron Nipped-B - chr2R_7_4700001 chr2R_4700001 RAL-894 612 chr2R 4750326 4750367 chr2R 4751497 4751534 1360 10 1172 5.5 2.0 3.8 2.1 1208 chr2R 4750326 intron conu + chr2R 4750930 intron conu + chr2R 4751534 intron conu + chr2R_10_4750001 chr2R_4750001 RAL-894 613 chr2R 4821196 4821237 chr2R 4821302 4821343 12 102 4.5 3.5 4.0 2.4 147 chr2R 4821196 intron CG17528 - chr2R 4821270 intron CG17528 - chr2R 4821343 intron CG17528 - chr2R_12_4820001 chr2R_4820001 RAL-894 614 chr2R 4838850 4838898 chr2R 4840393 4840412 transib2 6 1534 8.0 0.5 4.2 1.2 1562 chr2R 4838850 intergenic not near genes chr2R 4839631 intergenic not near genes chr2R 4840412 intergenic not near genes chr2R_6_4835001 chr2R_4835001 RAL-894 615 chr2R 4870723 4870740 chr2R 4871254 4871271 R1A1-element 5 530 2.5 5.0 3.8 1.0 548 chr2R 4870723 intergenic not near genes chr2R 4870997 intergenic not near genes chr2R 4871271 intergenic not near genes chr2R_5_4870001 chr2R_4870001 RAL-894 616 chr2R 5075927 5075966 chr2R 5076089 5076113 4 152 26.5 24.5 25.5 0.2 186 chr2R 5075927 intergenic not near genes chr2R 5076020 intergenic not near genes chr2R 5076113 intergenic not near genes chr2R_4_5075001 chr2R_5075001 RAL-894 617 chr2R 5109985 5110002 chr2R 5110629 5110629 5 641 5.0 4.5 4.8 0.9 644 chr2R 5109985 intergenic not near genes chr2R 5110307 intergenic not near genes chr2R 5110629 intergenic not near genes chr2R_5_5110001 chr2R_5110001 RAL-894 618 chr2R 5144920 5144926 chr2R 5145006 5145022 6 94 4.5 4.5 4.5 1.1 102 chr2R 5144920 intron Atf6 + chr2R 5144971 intron Atf6 + chr2R 5145022 intron Atf6 + chr2R_6_5140001 chr2R_5140001 RAL-894 619 chr2R 5192700 5192731 chr2R 5192797 5192818 8 94 3.0 5.0 4.0 1.6 118 chr2R 5192700 intron Nipped-A - chr2R 5192759 intron Nipped-A - chr2R 5192818 intron Nipped-A - chr2R_8_5190001 chr2R_5190001 RAL-894 620 chr2R 5237337 5237351 chr2R 5237439 5237448 4 101 7.0 2.0 4.5 0.7 111 chr2R 5237337 intron Nipped-A - chr2R 5237392 intron Nipped-A - chr2R 5237448 intron Nipped-A - chr2R_4_5235001 chr2R_5235001 RAL-894 621 chr2R 5240215 5240232 chr2R 5240301 5240315 6 89 11.0 8.0 9.5 0.6 100 chr2R 5240215 intron Nipped-A - chr2R 5240265 intron Nipped-A - chr2R 5240315 intron Nipped-A - chr2R_6_5240001 chr2R_5240001 RAL-894 622 chr2R 5303475 5303484 chr2R 5303583 5303592 4 108 7.0 6.0 6.5 0.5 117 chr2R 5303475 intergenic not near genes chr2R 5303534 intergenic not near genes chr2R 5303592 intergenic not near genes chr2R_4_5300001 chr2R_5300001 RAL-894 623 chr2R 5303491 5303521 chr2R 5303579 5303628 12 103 1.5 5.5 3.5 2.7 137 chr2R 5303491 intergenic not near genes chr2R 5303560 intergenic not near genes chr2R 5303628 intergenic not near genes chr2R_12_5300001 chr2R_5300001 RAL-894 624 chr2R 5363473 5363519 chr2R 5363571 5363616 8 92 7.0 9.5 8.2 0.9 143 chr2R 5363473 5` UTR CR42646 + chr2R 5363544 intron CR42646 + chr2R 5363616 intron CR42646 + chr2R_8_5360001 chr2R_5360001 RAL-894 625 chr2R 5396236 5396271 chr2R 5396494 5396529 11 255 25.0 16.5 20.8 0.5 293 chr2R 5396236 intergenic not near genes chr2R 5396382 intergenic not near genes chr2R 5396529 intergenic not near genes chr2R_11_5395001 chr2R_5395001 RAL-894 626 chr2R 5417978 5418018 chr2R 5420630 5420670 Burdock 10 2645 9.0 3.0 6.0 1.4 2692 chr2R 5417978 intron laccase2 + chr2R 5419324 intron laccase2 + chr2R 5420670 intron laccase2 + chr2R_10_5415001 chr2R_5415001 RAL-894 627 chr2R 5473347 5473374 chr2R 5473462 5473489 4 112 6.5 1.5 4.0 0.8 142 chr2R 5473347 intron CG30440 - chr2R 5473418 intron CG30440 - chr2R 5473489 intron CG30440 - chr2R_4_5470001 chr2R_5470001 RAL-894 628 chr2R 5543211 5543223 chr2R 5547281 5547327 invader1 11 4098 0.5 3.0 1.8 3.9 4116 chr2R 5543211 intron CG30438 + chr2R 5545269 intron CG30438 + chr2R 5547327 intron CG30438 + chr2R_11_5545001 chr2R_5545001 RAL-894 629 chr2R 5581397 5581425 chr2R 5627601 5627645 4 46212 0.0 5.0 2.5 1.1 46248 chr2R 5581397 intergenic not near genes chr2R 5604521 intron Fis1 - chr2R 5627645 intergenic not near genes chr2R_4_5600001 chr2R_5600001 RAL-894 630 chr2R 5772511 5772629 chr2R 5772623 5772756 5 101 0.0 0.0 0.0 5.0 245 chr2R 5772511 3` UTR Gp210 + chr2R 5772634 3` UTR Gp210 + chr2R 5772756 3` UTR Gp210 + chr2R_5_5770001 chr2R_5770001 RAL-894 631 chr2R 5772819 5772834 chr2R 5772921 5772936 7 101 6.0 6.5 6.2 1.0 117 chr2R 5772819 3` UTR Gp210 + chr2R 5772878 3` UTR Gp210 + chr2R 5772936 3` UTR Gp210 + chr2R_7_5770001 chr2R_5770001 RAL-894 632 chr2R 5772838 5772858 chr2R 5772919 5772960 10 100 3.0 6.5 4.8 1.7 122 chr2R 5772838 3` UTR Gp210 + chr2R 5772899 3` UTR Gp210 + chr2R 5772960 3` UTR Gp210 + chr2R_10_5770001 chr2R_5770001 RAL-894 633 chr2R 5782943 5782962 chr2R 5783036 5783056 7 99 3.0 8.5 5.8 1.0 113 chr2R 5782943 intergenic ZnT41F - chr2R 5783000 intergenic ZnT41F - chr2R 5783056 intergenic ZnT41F - chr2R_7_5780001 chr2R_5780001 RAL-894 634 chr2R 5790445 5790496 chr2R 5790550 5790591 18 101 3.5 4.0 3.8 3.8 146 chr2R 5790445 intergenic not near genes chr2R 5790518 intergenic not near genes chr2R 5790591 intergenic not near genes chr2R_18_5790001 chr2R_5790001 RAL-894 635 chr2R 5869266 5869306 chr2R 5874362 5874402 flea 11 5090 3.0 5.0 4.0 2.2 5136 chr2R 5869266 intergenic not near genes chr2R 5871834 intergenic not near genes chr2R 5874402 intergenic not near genes chr2R_11_5870001 chr2R_5870001 RAL-894 636 chr2R 5878909 5878947 chr2R 5879003 5879047 9 96 3.0 2.0 2.5 2.6 138 chr2R 5878909 intergenic CG44438 - chr2R 5878978 intergenic CG44438 - chr2R 5879047 intergenic CG44438 - chr2R_9_5875001 chr2R_5875001 RAL-894 637 chr2R 5902156 5902189 chr2R 5909718 5909768 17.6 5 7570 4.5 2.5 3.5 1.1 7612 chr2R 5902156 intron CG43366 + chr2R 5905962 intron CG43366 + chr2R 5909768 intron CG43366 + chr2R_5_5905001 chr2R_5905001 RAL-894 638 chr2R 6016767 6016788 chr2R 6016871 6016889 7 104 13.0 5.5 9.2 0.7 122 chr2R 6016767 intergenic not near genes chr2R 6016828 intergenic not near genes chr2R 6016889 intergenic not near genes chr2R_7_6015001 chr2R_6015001 RAL-894 639 chr2R 6016789 6016816 chr2R 6016868 6016920 13 101 6.0 4.0 5.0 2.2 131 chr2R 6016789 intergenic not near genes chr2R 6016854 intergenic not near genes chr2R 6016920 intergenic not near genes chr2R_13_6015001 chr2R_6015001 RAL-894 640 chr2R 6088354 6088387 chr2R 6088467 6088500 8 108 4.0 1.5 2.8 2.1 146 chr2R 6088354 intergenic not near genes chr2R 6088427 intergenic not near genes chr2R 6088500 intergenic not near genes chr2R_8_6085001 chr2R_6085001 RAL-894 641 chr2R 6129307 6129351 chr2R 6129405 6129445 10 96 4.5 3.0 3.8 2.1 138 chr2R 6129307 intron EcR - chr2R 6129376 intron EcR - chr2R 6129445 intron EcR - chr2R_10_6125001 chr2R_6125001 RAL-894 642 chr2R 6144390 6144438 chr2R 6144494 6144541 15 100 7.0 6.0 6.5 2.0 151 chr2R 6144390 intron EcR - chr2R 6144466 intron EcR - chr2R 6144541 intron EcR - chr2R_15_6140001 chr2R_6140001 RAL-894 643 chr2R 6168178 6168216 chr2R 6168280 6168317 12 100 6.5 0.0 3.2 2.9 139 chr2R 6168178 intron EcR - chr2R 6168248 intron EcR - chr2R 6168317 intron EcR - chr2R_12_6165001 chr2R_6165001 RAL-894 644 chr2R 6178100 6178143 chr2R 6178246 6178289 13 146 5.0 0.5 2.8 3.4 189 chr2R 6178100 intergenic not near genes chr2R 6178194 intergenic not near genes chr2R 6178289 intergenic not near genes chr2R_13_6175001 chr2R_6175001 RAL-894 645 chr2R 6194666 6194701 chr2R 6194769 6194788 8 98 9.5 3.5 6.5 1.1 122 chr2R 6194666 intron Ptr - chr2R 6194727 intron Ptr - chr2R 6194788 intron Ptr - chr2R_8_6190001 chr2R_6190001 RAL-894 646 chr2R 6494522 6494532 chr2R 6499304 6499308 F-element 5 4781 6.0 5.0 5.5 0.8 4786 chr2R 6494522 intergenic not near genes chr2R 6496915 intergenic not near genes chr2R 6499308 intergenic not near genes chr2R_5_6495001 chr2R_6495001 RAL-894 647 chr2R 6502258 6502284 chr2R 6502566 6502611 5 314 2.5 1.5 2.0 1.7 353 chr2R 6502258 5` UTR jing + chr2R 6502434 5` UTR jing + chr2R 6502611 5` UTR jing + chr2R_5_6500001 chr2R_6500001 RAL-894 648 chr2R 6504843 6504862 chr2R 6505304 6505308 7 456 9.0 2.5 5.8 1.0 465 chr2R 6504843 intron jing + chr2R 6505076 intron jing + chr2R 6505308 intron jing + chr2R_7_6505001 chr2R_6505001 RAL-894 649 chr2R 6504863 6504893 chr2R 6505302 6505353 8 444 6.0 2.5 4.2 1.5 490 chr2R 6504863 intron jing + chr2R 6505108 intron jing + chr2R 6505353 intron jing + chr2R_8_6505001 chr2R_6505001 RAL-894 650 chr2R 6530748 6530796 chr2R 6530848 6530896 14 99 3.0 2.5 2.8 3.7 148 chr2R 6530748 intron jing + chr2R 6530822 intron jing + chr2R 6530896 intron jing + chr2R_14_6530001 chr2R_6530001 RAL-894 651 chr2R 6539828 6539856 chr2R 6539963 6539991 11 133 0.5 2.0 1.2 5.0 163 chr2R 6539828 intron jing + chr2R 6539910 intron jing + chr2R 6539991 intron jing + chr2R_11_6535001 chr2R_6535001 RAL-894 652 chr2R 6546701 6546750 chr2R 6546822 6546870 10 120 3.5 3.5 3.5 2.2 169 chr2R 6546701 intron jing + chr2R 6546786 intron jing + chr2R 6546870 intron jing + chr2R_10_6545001 chr2R_6545001 RAL-894 653 chr2R 6579758 6579783 chr2R 6584864 6584889 flea 9 5103 7.5 4.0 5.8 1.3 5131 chr2R 6579758 intron jing + chr2R 6582324 intron jing + chr2R 6584889 intron jing + chr2R_9_6580001 chr2R_6580001 RAL-894 654 chr2R 6664164 6664211 chr2R 6665970 6666017 S-element 15 1806 4.0 3.0 3.5 3.3 1853 chr2R 6664164 intron,3` UTR Adf1 +,CR45128 - chr2R 6665090 intron Adf1 + chr2R 6666017 intron Adf1 + chr2R_15_6665001 chr2R_6665001 RAL-894 655 chr2R 6699570 6699620 chr2R 6699675 6699725 9 104 2.5 4.0 3.2 2.1 155 chr2R 6699570 intergenic Rab2 + chr2R 6699648 intergenic Rab2 + chr2R 6699725 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_9_6695001 chr2R_6695001 RAL-894 656 chr2R 6741523 6741529 chr2R 6741586 6741588 4 70 1.5 2.0 1.8 1.4 65 chr2R 6741523 intergenic phtf + chr2R 6741556 intergenic phtf + chr2R 6741588 intergenic phtf + chr2R_4_6740001 chr2R_6740001 RAL-894 657 chr2R 6757690 6757743 chr2R 6757787 6757829 7 90 2.5 1.5 2.0 2.3 139 chr2R 6757690 3` UTR CG9436 - chr2R 6757760 3` UTR CG9436 - chr2R 6757829 3` UTR CG9436 - chr2R_7_6755001 chr2R_6755001 RAL-894 658 chr2R 6898297 6898325 chr2R 6898654 6898688 5 356 4.5 3.0 3.8 1.0 391 chr2R 6898297 intron CG30158 + chr2R 6898492 intron CG30158 + chr2R 6898688 intron CG30158 + chr2R_5_6895001 chr2R_6895001 RAL-894 659 chr2R 6948067 6948103 chr2R 6948163 6948199 7 95 1.0 3.0 2.0 2.3 132 chr2R 6948067 intron,intron mim -,CheB42c - chr2R 6948133 intron,intron mim -,CheB42c - chr2R 6948199 intron,intron mim -,CheB42c - chr2R_7_6945001 chr2R_6945001 RAL-894 660 chr2R 6952150 6952185 chr2R 6959750 6959785 opus 13 7600 4.0 4.5 4.2 2.5 7635 chr2R 6952150 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955968 intron,intron mim -,CheB42c - chr2R 6959785 intron,intron mim -,CheB42c - chr2R_13_6955001 chr2R_6955001 RAL-894 661 chr2R 6978832 6978884 chr2R 6979120 6979172 11 282 5.0 4.0 4.5 2.0 340 chr2R 6978832 intron vimar - chr2R 6979002 intron vimar - chr2R 6979172 intron vimar - chr2R_11_6975001 chr2R_6975001 RAL-894 662 chr2R 7091193 7091242 chr2R 7091295 7091343 12 102 7.0 6.5 6.8 1.5 150 chr2R 7091193 intron esn + chr2R 7091268 intron esn + chr2R 7091343 intron esn + chr2R_12_7090001 chr2R_7090001 RAL-894 663 chr2R 7105063 7105115 chr2R 7105167 7105181 13 97 3.5 5.0 4.2 2.5 118 chr2R 7105063 intron esn + chr2R 7105122 intron esn + chr2R 7105181 intron esn + chr2R_13_7105001 chr2R_7105001 RAL-894 664 chr2R 7160493 7160537 chr2R 7160776 7160795 9 271 2.0 2.5 2.2 2.8 302 chr2R 7160493 intron pk + chr2R 7160644 intron pk + chr2R 7160795 intron pk + chr2R_9_7160001 chr2R_7160001 RAL-894 665 chr2R 7196553 7196590 chr2R 7201347 7201381 F-element 13 4794 5.0 7.0 6.0 1.9 4828 chr2R 7196553 intron pk + chr2R 7198967 intron pk + chr2R 7201381 intron pk + chr2R_13_7195001 chr2R_7195001 RAL-894 666 chr2R 7235817 7235852 chr2R 7240918 7240944 jockey 6 5099 4.5 2.5 3.5 1.3 5127 chr2R 7235817 intergenic not near genes chr2R 7238380 intergenic not near genes chr2R 7240944 intergenic not near genes chr2R_6_7235001 chr2R_7235001 RAL-894 667 chr2R 7328113 7328148 chr2R 7328242 7328279 6 127 4.5 2.5 3.5 1.3 166 chr2R 7328113 intron,intron Dscam1 -,CR45129 + chr2R 7328196 intron,intron Dscam1 -,CR45129 + chr2R 7328279 intron,intron Dscam1 -,CR45129 + chr2R_6_7325001 chr2R_7325001 RAL-894 668 chr2R 7376433 7376501 chr2R 7376552 7376585 12 97 0.0 2.5 1.2 5.5 152 chr2R 7376433 intron Dscam1 - chr2R 7376509 intron Dscam1 - chr2R 7376585 intron Dscam1 - chr2R_12_7375001 chr2R_7375001 RAL-894 669 chr2R 7417902 7418166 chr2R 7417993 7418265 21 94 4.0 8.0 6.0 3.0 363 chr2R 7417902 intergenic not near genes chr2R 7418084 intergenic not near genes chr2R 7418265 intergenic not near genes chr2R_21_7415001 chr2R_7415001 RAL-894 670 chr2R 7434877 7434903 chr2R 7439198 7439224 Juan 8 4320 6.0 3.5 4.8 1.4 4347 chr2R 7434877 intergenic so + chr2R 7437050 intergenic not near genes chr2R 7439224 intergenic not near genes chr2R_8_7435001 chr2R_7435001 RAL-894 671 chr2R 7459259 7459279 chr2R 7459367 7459387 6 108 7.0 1.5 4.2 1.2 128 chr2R 7459259 intergenic Inos -,CG11141 - chr2R 7459323 intergenic CG11141 -,Inos - chr2R 7459387 intergenic CG11141 - chr2R_6_7455001 chr2R_7455001 RAL-894 672 chr2R 7473943 7473975 chr2R 7474025 7474039 6 81 3.0 1.5 2.2 1.9 96 chr2R 7473943 intron Aldh-III - chr2R 7473991 intron Aldh-III - chr2R 7474039 intron Aldh-III - chr2R_6_7470001 chr2R_7470001 RAL-894 673 chr2R 7604353 7604380 chr2R 7604499 7604523 7 142 2.5 9.5 6.0 1.0 170 chr2R 7604353 intron CG1358 - chr2R 7604438 intron CG1358 - chr2R 7604523 intron CG1358 - chr2R_7_7600001 chr2R_7600001 RAL-894 674 chr2R 7608398 7608412 chr2R 7613616 7613635 I-element 5 5222 11.0 8.0 9.5 0.5 5237 chr2R 7608398 intron CG1358 - chr2R 7611016 intron CG1358 - chr2R 7613635 intron CG1358 - chr2R_5_7610001 chr2R_7610001 RAL-894 675 chr2R 7608417 7608430 chr2R 7613609 7613653 I-element 6 5216 8.0 7.5 7.8 0.7 5236 chr2R 7608417 intron CG1358 - chr2R 7611035 intron CG1358 - chr2R 7613653 intron CG1358 - chr2R_6_7610001 chr2R_7610001 RAL-894 676 chr2R 7614728 7614780 chr2R 7614835 7614846 15 102 1.5 0.0 0.8 8.3 118 chr2R 7614728 intron CG1358 - chr2R 7614787 intron CG1358 - chr2R 7614846 intron CG1358 - chr2R_15_7610001 chr2R_7610001 RAL-894 677 chr2R 7642852 7642889 chr2R 7642947 7642989 13 96 5.5 4.0 4.8 2.2 137 chr2R 7642852 intron CG43340 + chr2R 7642920 intron CG43340 + chr2R 7642989 intron CG43340 + chr2R_13_7640001 chr2R_7640001 RAL-894 678 chr2R 7714061 7714101 chr2R 7714157 7714197 11 92 7.5 5.0 6.2 1.5 136 chr2R 7714061 exon CG1942 + chr2R 7714129 3` UTR CG1942 + chr2R 7714197 intergenic CG1942 + chr2R_11_7710001 chr2R_7710001 RAL-894 679 chr2R 7765750 7765786 chr2R 7765961 7765998 23 205 3.5 5.0 4.2 4.4 248 chr2R 7765750 intron,intron CG30497 -,CG45093 - chr2R 7765874 intron,intron CG30497 -,CG45093 - chr2R 7765998 intron,intron CG30497 -,CG45093 - chr2R_23_7765001 chr2R_7765001 RAL-894 680 chr2R 7815650 7815696 chr2R 7822139 7822185 Burdock 13 6484 7.5 3.5 5.5 2.0 6535 chr2R 7815650 intergenic CG1882 + chr2R 7818918 intergenic not near genes chr2R 7822185 3` UTR cathD - chr2R_13_7815001 chr2R_7815001 RAL-894 681 chr2R 7855281 7855300 chr2R 7855376 7855408 6 106 0.5 2.5 1.5 2.4 127 chr2R 7855281 intron Dgk - chr2R 7855344 intron Dgk - chr2R 7855408 intron Dgk - chr2R_6_7855001 chr2R_7855001 RAL-894 682 chr2R 7875492 7875512 chr2R 7875616 7875636 5 124 2.0 1.5 1.8 1.8 144 chr2R 7875492 intron Dgk - chr2R 7875564 intron Dgk - chr2R 7875636 intron Dgk - chr2R_5_7875001 chr2R_7875001 RAL-894 683 chr2R 7942926 7942954 chr2R 7943192 7943229 6 267 4.5 5.5 5.0 1.0 303 chr2R 7942926 intron CG14764 - chr2R 7943078 intron CG14764 - chr2R 7943229 intron CG14764 - chr2R_6_7940001 chr2R_7940001 RAL-894 684 chr2R 7952141 7952165 chr2R 7952420 7952454 6 282 1.0 5.5 3.2 1.4 313 chr2R 7952141 intron CG14764 - chr2R 7952298 intron CG14764 - chr2R 7952454 intron CG14764 - chr2R_6_7950001 chr2R_7950001 RAL-894 685 chr2R 7956086 7956114 chr2R 7956182 7956210 6 96 2.5 6.0 4.2 1.2 124 chr2R 7956086 intergenic CG2906 +,CG14764 - chr2R 7956148 intergenic CG2906 +,CG14764 - chr2R 7956210 exon CG2906 + chr2R_6_7955001 chr2R_7955001 RAL-894 686 chr2R 7982053 7982098 chr2R 7982173 7982182 6 113 4.0 1.0 2.5 1.7 129 chr2R 7982053 intron ACC - chr2R 7982118 intron ACC - chr2R 7982182 intron ACC - chr2R_6_7980001 chr2R_7980001 RAL-894 687 chr2R 8026791 8026836 chr2R 8026887 8026932 14 94 3.0 3.5 3.2 3.3 141 chr2R 8026791 intergenic CR45267 + chr2R 8026862 intergenic CR45267 + chr2R 8026932 intergenic CR45267 + chr2R_14_8025001 chr2R_8025001 RAL-894 688 chr2R 8067049 8067093 chr2R 8067153 8067197 20 96 7.5 7.0 7.2 2.4 148 chr2R 8067049 intron CG17977 - chr2R 8067123 intron CG17977 - chr2R 8067197 exon CG17977 - chr2R_20_8065001 chr2R_8065001 RAL-894 689 chr2R 8076659 8076709 chr2R 8076759 8076797 19 99 4.0 3.0 3.5 4.2 138 chr2R 8076659 intron lig + chr2R 8076728 intron lig + chr2R 8076797 intron lig + chr2R_19_8075001 chr2R_8075001 RAL-894 690 chr2R 8089249 8089265 chr2R 8089339 8089361 5 97 3.5 2.5 3.0 1.2 112 chr2R 8089249 3` UTR sut2 + chr2R 8089305 intergenic sut2 +,sut3 + chr2R 8089361 intergenic sut2 +,sut3 + chr2R_5_8085001 chr2R_8085001 RAL-894 691 chr2R 8203739 8203769 chr2R 8203836 8203881 6 108 1.5 0.0 0.8 3.3 142 chr2R 8203739 intron LRP1 + chr2R 8203810 intron LRP1 + chr2R 8203881 intron LRP1 + chr2R_6_8200001 chr2R_8200001 RAL-894 692 chr2R 8236016 8236057 chr2R 8236117 8236157 11 100 1.5 1.0 1.2 5.0 141 chr2R 8236016 intergenic not near genes chr2R 8236086 intergenic not near genes chr2R 8236157 intergenic not near genes chr2R_11_8235001 chr2R_8235001 RAL-894 693 chr2R 8280815 8280866 chr2R 8280913 8280925 10 91 3.0 2.5 2.8 2.6 110 chr2R 8280815 intergenic not near genes chr2R 8280870 intergenic not near genes chr2R 8280925 intergenic not near genes chr2R_10_8280001 chr2R_8280001 RAL-894 694 chr2R 8330849 8330896 chr2R 8331349 8331378 roo 12 497 4.0 6.5 5.2 1.9 529 chr2R 8330849 intron pdm3 + chr2R 8331114 intron pdm3 + chr2R 8331378 intron pdm3 + chr2R_12_8330001 chr2R_8330001 RAL-894 695 chr2R 8441926 8441946 chr2R 8442057 8442087 4 138 2.5 4.5 3.5 0.9 161 chr2R 8441926 intron Cyp4ad1 - chr2R 8442006 intron Cyp4ad1 - chr2R 8442087 intron Cyp4ad1 - chr2R_4_8440001 chr2R_8440001 RAL-894 696 chr2R 8483947 8483984 chr2R 8484043 8484080 7 95 2.5 3.5 3.0 1.8 133 chr2R 8483947 intron mtt - chr2R 8484014 intron mtt - chr2R 8484080 intron mtt - chr2R_7_8480001 chr2R_8480001 RAL-894 697 chr2R 8489942 8489968 chr2R 8490039 8490065 6 97 0.0 3.5 1.8 2.1 123 chr2R 8489942 intron mtt - chr2R 8490004 intron mtt - chr2R 8490065 intron mtt - chr2R_6_8490001 chr2R_8490001 RAL-894 698 chr2R 8525086 8525101 chr2R 8525181 8525187 6 95 0.0 8.0 4.0 1.2 101 chr2R 8525086 intron mtt - chr2R 8525136 intron mtt - chr2R 8525187 intron mtt - chr2R_6_8525001 chr2R_8525001 RAL-894 699 chr2R 8566011 8566067 chr2R 8566983 8567009 1360 20 970 2.0 4.5 3.2 4.8 998 chr2R 8566011 5` UTR Cyp6a14 - chr2R 8566510 5` UTR Cyp6a14 - chr2R 8567009 5` UTR Cyp6a14 - chr2R_20_8565001 chr2R_8565001 RAL-894 700 chr2R 8612566 8612605 chr2R 8612663 8612702 10 96 5.5 4.0 4.8 1.7 136 chr2R 8612566 intron CG8642 - chr2R 8612634 intron CG8642 - chr2R 8612702 intron CG8642 - chr2R_10_8610001 chr2R_8610001 RAL-894 701 chr2R 8615755 8615797 chr2R 8615888 8615930 23 129 5.5 0.5 3.0 5.8 175 chr2R 8615755 intron Cirl + chr2R 8615842 intron Cirl + chr2R 8615930 5` UTR Cirl + chr2R_23_8615001 chr2R_8615001 RAL-894 702 chr2R 8722752 8722792 chr2R 8723013 8723038 pogo 12 250 5.5 2.5 4.0 2.4 286 chr2R 8722752 intron CG14767 - chr2R 8722895 intron CG14767 - chr2R 8723038 intron CG14767 - chr2R_12_8720001 chr2R_8720001 RAL-894 703 chr2R 8777900 8777941 chr2R 8784101 8784150 diver 5 6208 4.5 2.0 3.2 1.2 6250 chr2R 8777900 intergenic not near genes chr2R 8781025 intergenic not near genes chr2R 8784150 intergenic not near genes chr2R_5_8780001 chr2R_8780001 RAL-894 704 chr2R 8803373 8803405 chr2R 8803483 8803515 4 104 2.0 0.0 1.0 2.0 142 chr2R 8803373 intron sns + chr2R 8803444 intron sns + chr2R 8803515 intron sns + chr2R_4_8800001 chr2R_8800001 RAL-894 705 chr2R 8808276 8808312 chr2R 8808374 8808392 5 90 2.5 0.5 1.5 2.0 116 chr2R 8808276 intron sns + chr2R 8808334 intron sns + chr2R 8808392 intron sns + chr2R_5_8805001 chr2R_8805001 RAL-894 706 chr2R 8833420 8833449 chr2R 8833508 8833540 7 92 5.5 2.5 4.0 1.4 120 chr2R 8833420 intron sns + chr2R 8833480 intron sns + chr2R 8833540 intron sns + chr2R_7_8830001 chr2R_8830001 RAL-894 707 chr2R 8907219 8907268 chr2R 8907488 8907537 12 268 3.0 3.5 3.2 2.9 318 chr2R 8907219 intergenic CG8258 -,CG30349 + chr2R 8907378 intergenic CG30349 +,CG8258 - chr2R 8907537 5` UTR CG30349 + chr2R_12_8905001 chr2R_8905001 RAL-894 708 chr2R 8976199 8976223 chr2R 8976307 8976332 6 107 3.0 4.0 3.5 1.3 133 chr2R 8976199 intron CG8213 - chr2R 8976266 intron CG8213 - chr2R 8976332 intron CG8213 - chr2R_6_8975001 chr2R_8975001 RAL-894 709 chr2R 9026812 9026855 chr2R 9026952 9026995 10 139 4.5 3.5 4.0 2.0 183 chr2R 9026812 intron CG8170 - chr2R 9026904 intron CG8170 - chr2R 9026995 intron CG8170 - chr2R_10_9025001 chr2R_9025001 RAL-894 710 chr2R 9047405 9047438 chr2R 9047520 9047553 8 113 6.5 4.0 5.2 1.3 148 chr2R 9047405 intron CG13743 - chr2R 9047479 intron CG13743 - chr2R 9047553 intron CG13743 - chr2R_8_9045001 chr2R_9045001 RAL-894 711 chr2R 9212713 9212723 chr2R 9213177 9213186 roo 5 479 4.0 1.0 2.5 1.4 473 chr2R 9212713 intergenic CR45309 + chr2R 9212950 intergenic CR45309 + chr2R 9213186 5` UTR CR45309 + chr2R_5_9210001 chr2R_9210001 RAL-894 712 chr2R 9480065 9480109 chr2R 9490616 9490645 roo 8 10549 5.5 6.5 6.0 1.1 10580 chr2R 9480065 intergenic not near genes chr2R 9485355 intergenic not near genes chr2R 9490645 intergenic not near genes chr2R_8_9485001 chr2R_9485001 RAL-894 713 chr2R 9510656 9510697 chr2R 9510787 9510804 10 132 0.0 1.0 0.5 6.7 148 chr2R 9510656 intron brp + chr2R 9510730 intron brp + chr2R 9510804 intron brp + chr2R_10_9510001 chr2R_9510001 RAL-894 714 chr2R 9561829 9561849 chr2R 9561937 9561957 7 108 0.5 0.0 0.2 5.8 128 chr2R 9561829 3` UTR,intron CR45281 -,CG1809 + chr2R 9561893 3` UTR,intron CR45281 -,CG1809 + chr2R 9561957 3` UTR,intron CR45281 -,CG1809 + chr2R_7_9560001 chr2R_9560001 RAL-894 715 chr2R 9616628 9616642 chr2R 9616743 9616747 5 119 8.5 1.5 5.0 0.8 119 chr2R 9616628 intron Mmp2 - chr2R 9616688 intron Mmp2 - chr2R 9616747 intron Mmp2 - chr2R_5_9615001 chr2R_9615001 RAL-894 716 chr2R 9672326 9672343 chr2R 9672405 9672441 5 94 2.0 3.0 2.5 1.4 115 chr2R 9672326 intron Mmp2 - chr2R 9672384 intron Mmp2 - chr2R 9672441 intron Mmp2 - chr2R_5_9670001 chr2R_9670001 RAL-894 717 chr2R 9699430 9699442 chr2R 9699520 9699533 4 95 1.5 6.0 3.8 0.8 103 chr2R 9699430 intergenic not near genes chr2R 9699482 intergenic not near genes chr2R 9699533 intergenic not near genes chr2R_4_9695001 chr2R_9695001 RAL-894 718 chr2R 9726596 9726636 chr2R 9734167 9734207 17.6 17 7570 5.5 5.5 5.5 2.6 7611 chr2R 9726596 intron sqa - chr2R 9730402 intron sqa - chr2R 9734207 intron sqa - chr2R_17_9730001 chr2R_9730001 RAL-894 719 chr2R 9807412 9807459 chr2R 9807575 9807623 5 164 0.0 5.0 2.5 1.4 211 chr2R 9807412 intergenic not near genes chr2R 9807518 intergenic not near genes chr2R 9807623 intergenic not near genes chr2R_5_9805001 chr2R_9805001 RAL-894 720 chr2R 9817426 9817454 chr2R 9817510 9817523 9 84 4.5 5.5 5.0 1.5 97 chr2R 9817426 intron,exon CG1648 -,lectin-46Ca + chr2R 9817474 intron,intron CG1648 -,lectin-46Ca + chr2R 9817523 intron,intron CG1648 -,lectin-46Ca + chr2R_9_9815001 chr2R_9815001 RAL-894 721 chr2R 9869653 9869707 chr2R 9869784 9869838 14 130 6.5 6.0 6.2 1.9 185 chr2R 9869653 intron cbx - chr2R 9869746 intron cbx - chr2R 9869838 intron cbx - chr2R_14_9865001 chr2R_9865001 RAL-894 722 chr2R 9928431 9928450 chr2R 9928559 9928595 6 138 3.5 5.5 4.5 1.1 164 chr2R 9928431 intron Mef2 - chr2R 9928513 intron Mef2 - chr2R 9928595 intron Mef2 - chr2R_6_9925001 chr2R_9925001 RAL-894 723 chr2R 9935010 9935146 chr2R 9935111 9935403 21 130 0.0 0.0 0.0 21.0 393 chr2R 9935010 intron Mef2 - chr2R 9935206 intron Mef2 - chr2R 9935403 intron Mef2 - chr2R_21_9935001 chr2R_9935001 RAL-894 724 chr2R 9935163 9935167 chr2R 9935405 9935419 4 248 0.0 5.5 2.8 1.1 256 chr2R 9935163 intron Mef2 - chr2R 9935291 intron Mef2 - chr2R 9935419 intron Mef2 - chr2R_4_9935001 chr2R_9935001 RAL-894 725 chr2R 9945437 9945461 chr2R 9945634 9945673 BS 5 201 4.0 3.5 3.8 1.0 236 chr2R 9945437 intron Mef2 - chr2R 9945555 intron Mef2 - chr2R 9945673 intron Mef2 - chr2R_5_9945001 chr2R_9945001 RAL-894 726 chr2R 9956043 9956093 chr2R 9956140 9956190 20 96 12.0 8.0 10.0 1.8 147 chr2R 9956043 intron Mef2 - chr2R 9956116 intron Mef2 - chr2R 9956190 intron Mef2 - chr2R_20_9955001 chr2R_9955001 RAL-894 727 chr2R 9975912 9975941 chr2R 9976031 9976040 4 118 3.0 1.0 2.0 1.3 128 chr2R 9975912 intergenic not near genes chr2R 9975976 intergenic not near genes chr2R 9976040 intergenic not near genes chr2R_4_9975001 chr2R_9975001 RAL-894 728 chr2R 10001517 10001543 chr2R 10001602 10001646 7 96 4.0 3.0 3.5 1.6 129 chr2R 10001517 intron Pka-R2 - chr2R 10001582 intron Pka-R2 - chr2R 10001646 intron Pka-R2 - chr2R_7_10000001 chr2R_10000001 RAL-894 729 chr2R 10005545 10005580 chr2R 10005661 10005693 16 113 4.5 4.0 4.2 3.1 148 chr2R 10005545 intron Pka-R2 - chr2R 10005619 intron Pka-R2 - chr2R 10005693 intron Pka-R2 - chr2R_16_10005001 chr2R_10005001 RAL-894 730 chr2R 10005841 10005872 chr2R 10007014 10007030 1360 4 1172 4.5 2.0 3.2 1.0 1189 chr2R 10005841 intron Pka-R2 - chr2R 10006436 intron Pka-R2 - chr2R 10007030 intron Pka-R2 - chr2R_4_10005001 chr2R_10005001 RAL-894 731 chr2R 10047801 10047836 chr2R 10047900 10047939 12 101 5.0 8.5 6.8 1.5 138 chr2R 10047801 intron oys - chr2R 10047870 intron oys - chr2R 10047939 intron oys - chr2R_12_10045001 chr2R_10045001 RAL-894 732 chr2R 10051315 10051328 chr2R 10051411 10051423 4 95 11.0 5.5 8.2 0.4 108 chr2R 10051315 exon sel - chr2R 10051369 intron sel - chr2R 10051423 intron sel - chr2R_4_10050001 chr2R_10050001 RAL-894 733 chr2R 10051329 10051360 chr2R 10051410 10051424 7 79 4.0 5.5 4.8 1.2 95 chr2R 10051329 exon sel - chr2R 10051376 intron sel - chr2R 10051424 intron sel - chr2R_7_10050001 chr2R_10050001 RAL-894 734 chr2R 10052805 10052836 chr2R 10053458 10053483 7 651 4.5 4.5 4.5 1.3 678 chr2R 10052805 5` UTR,3` UTR magu +,CR44297 - chr2R 10053144 intron,3` UTR magu +,CR44298 - chr2R 10053483 intron magu + chr2R_7_10050001 chr2R_10050001 RAL-894 735 chr2R 10087279 10087326 chr2R 10087375 10087416 6 94 3.5 0.5 2.0 2.0 137 chr2R 10087279 intron CG2269 + chr2R 10087348 intron CG2269 + chr2R 10087416 intron CG2269 + chr2R_6_10085001 chr2R_10085001 RAL-894 736 chr2R 10122726 10122742 chr2R 10122956 10122957 5 227 7.5 5.5 6.5 0.7 231 chr2R 10122726 intergenic Ccs - chr2R 10122842 intergenic Ccs - chr2R 10122957 intergenic Ccs - chr2R_5_10120001 chr2R_10120001 RAL-894 737 chr2R 10129704 10129714 chr2R 10130082 10130099 4 390 1.0 3.0 2.0 1.3 395 chr2R 10129704 intron gem + chr2R 10129902 intron gem + chr2R 10130099 intron gem + chr2R_4_10125001 chr2R_10125001 RAL-894 738 chr2R 10176864 10176871 chr2R 10186051 10186058 roo 4 9187 10.5 6.0 8.2 0.4 9194 chr2R 10176864 intron KCNQ - chr2R 10181461 intron KCNQ - chr2R 10186058 intron KCNQ - chr2R_4_10180001 chr2R_10180001 RAL-894 739 chr2R 10176874 10176911 chr2R 10186044 10186098 roo 14 9184 6.0 5.0 5.5 2.2 9224 chr2R 10176874 intron KCNQ - chr2R 10181486 intron KCNQ - chr2R 10186098 intron KCNQ - chr2R_14_10180001 chr2R_10180001 RAL-894 740 chr2R 10197378 10197402 chr2R 10197469 10197506 8 103 8.0 3.0 5.5 1.2 128 chr2R 10197378 3` UTR CG34221 - chr2R 10197442 3` UTR CG34221 - chr2R 10197506 3` UTR CG34221 - chr2R_8_10195001 chr2R_10195001 RAL-894 741 chr2R 10203648 10203661 chr2R 10203728 10203766 7 100 4.0 0.0 2.0 2.3 118 chr2R 10203648 intergenic not near genes chr2R 10203707 intergenic not near genes chr2R 10203766 intergenic not near genes chr2R_7_10200001 chr2R_10200001 RAL-894 742 chr2R 10274801 10274826 chr2R 10274897 10274912 5 93 3.0 0.0 1.5 2.0 111 chr2R 10274801 intron CAP + chr2R 10274856 intron CAP + chr2R 10274912 intron CAP + chr2R_5_10270001 chr2R_10270001 RAL-894 743 chr2R 10286052 10286069 chr2R 10286193 10286210 6 140 5.5 5.5 5.5 0.9 158 chr2R 10286052 intron CAP + chr2R 10286131 intron CAP + chr2R 10286210 intron CAP + chr2R_6_10285001 chr2R_10285001 RAL-894 744 chr2R 10286071 10286084 chr2R 10286192 10286218 5 136 4.5 5.5 5.0 0.8 147 chr2R 10286071 intron CAP + chr2R 10286144 intron CAP + chr2R 10286218 intron CAP + chr2R_5_10285001 chr2R_10285001 RAL-894 745 chr2R 10313296 10313337 chr2R 10313404 10313446 11 112 0.5 2.5 1.5 4.4 150 chr2R 10313296 intergenic not near genes chr2R 10313371 intergenic not near genes chr2R 10313446 intergenic Ndg + chr2R_11_10310001 chr2R_10310001 RAL-894 746 chr2R 10318499 10318536 chr2R 10318605 10318642 15 104 0.5 2.5 1.5 6.0 143 chr2R 10318499 intron Ndg + chr2R 10318570 intron Ndg + chr2R 10318642 intron Ndg + chr2R_15_10315001 chr2R_10315001 RAL-894 747 chr2R 10352690 10352705 chr2R 10352752 10352772 6 70 3.5 5.0 4.2 1.2 82 chr2R 10352690 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352731 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352772 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_6_10350001 chr2R_10350001 RAL-894 748 chr2R 10363847 10363885 chr2R 10363946 10363984 7 98 4.5 7.0 5.8 1.0 137 chr2R 10363847 intron CG42732 - chr2R 10363916 intron CG42732 - chr2R 10363984 intron CG42732 - chr2R_7_10360001 chr2R_10360001 RAL-894 749 chr2R 10374774 10374801 chr2R 10374873 10374889 4 96 0.5 5.0 2.8 1.1 115 chr2R 10374774 intron CG42732 - chr2R 10374832 intron CG42732 - chr2R 10374889 intron CG42732 - chr2R_4_10370001 chr2R_10370001 RAL-894 750 chr2R 10376717 10376868 chr2R 10376865 10377005 4 140 0.5 0.5 0.5 2.7 288 chr2R 10376717 intron CG42732 - chr2R 10376861 intron CG42732 - chr2R 10377005 intron CG42732 - chr2R_4_10375001 chr2R_10375001 RAL-894 751 chr2R 10469026 10469056 chr2R 10469152 10469200 23 143 2.5 3.0 2.8 6.1 174 chr2R 10469026 intron CG11777 + chr2R 10469113 intron CG11777 + chr2R 10469200 exon CG11777 + chr2R_23_10465001 chr2R_10465001 RAL-894 752 chr2R 10478773 10478787 chr2R 10478871 10478885 6 98 7.0 4.0 5.5 0.9 112 chr2R 10478773 5` UTR CR45134 + chr2R 10478829 intergenic CR45134 +,trsn -,whd - chr2R 10478885 intergenic CR45134 +,trsn -,whd - chr2R_6_10475001 chr2R_10475001 RAL-894 753 chr2R 10536513 10536526 chr2R 10537206 10537224 9 695 15.5 19.5 17.5 0.5 711 chr2R 10536513 intron,3` UTR lola -,snoRNA:lola-a - chr2R 10536868 intron,3` UTR lola -,snoRNA:lola-b - chr2R 10537224 intron,3` UTR lola -,snoRNA:lola-d - chr2R_9_10535001 chr2R_10535001 RAL-894 754 chr2R 10550337 10550366 chr2R 10550444 10550473 7 107 8.5 0.5 4.5 1.3 136 chr2R 10550337 intergenic not near genes chr2R 10550405 intergenic not near genes chr2R 10550473 intergenic not near genes chr2R_7_10550001 chr2R_10550001 RAL-894 755 chr2R 10563904 10563909 chr2R 10564115 10564120 4 211 0.0 3.5 1.8 1.4 216 chr2R 10563904 intron psq + chr2R 10564012 intron psq + chr2R 10564120 intron psq + chr2R_4_10560001 chr2R_10560001 RAL-894 756 chr2R 10582094 10582138 chr2R 10582208 10582243 15 112 4.5 1.0 2.8 3.9 149 chr2R 10582094 intron psq + chr2R 10582168 intron psq + chr2R 10582243 intron psq + chr2R_15_10580001 chr2R_10580001 RAL-894 757 chr2R 10585579 10585590 chr2R 10594141 10594167 Tirant 8 8572 3.5 2.5 3.0 2.0 8588 chr2R 10585579 intron psq + chr2R 10589873 intron psq + chr2R 10594167 intron psq + chr2R_8_10585001 chr2R_10585001 RAL-894 758 chr2R 10622342 10622358 chr2R 10637126 10637142 mdg1 7 14782 6.5 4.0 5.2 1.1 14800 chr2R 10622342 intron CG11883 + chr2R 10629742 intron CG11883 + chr2R 10637142 intron CG11883 + chr2R_7_10625001 chr2R_10625001 RAL-894 759 chr2R 10761535 10761589 chr2R 10761709 10761763 10 173 1.5 4.5 3.0 2.5 228 chr2R 10761535 intron,5` UTR CG33144 -,CR43605 + chr2R 10761649 intron,5` UTR CG33144 -,CR43605 + chr2R 10761763 intron CG33144 - chr2R_10_10760001 chr2R_10760001 RAL-894 760 chr2R 10790129 10790176 chr2R 10790232 10790270 17 104 5.0 3.0 4.0 3.4 141 chr2R 10790129 intron CG33144 - chr2R 10790200 intron CG33144 - chr2R 10790270 intron CG33144 - chr2R_17_10790001 chr2R_10790001 RAL-894 761 chr2R 10796492 10796543 chr2R 10799339 10799354 5 2822 27.0 23.5 25.2 0.2 2862 chr2R 10796492 intron CG33144 - chr2R 10797923 intron CG33144 - chr2R 10799354 intergenic not near genes chr2R_5_10795001 chr2R_10795001 RAL-894 762 chr2R 10862552 10862603 chr2R 10862683 10862734 10 130 2.5 8.5 5.5 1.5 182 chr2R 10862552 intron CG30015 - chr2R 10862643 intron CG30015 - chr2R 10862734 intron CG30015 - chr2R_10_10860001 chr2R_10860001 RAL-894 763 chr2R 10947073 10947125 chr2R 10947180 10947223 4 105 5.0 0.0 2.5 1.1 150 chr2R 10947073 5` UTR CR45228 + chr2R 10947148 intergenic CR45228 + chr2R 10947223 intergenic CR45228 + chr2R_4_10945001 chr2R_10945001 RAL-894 764 chr2R 11009795 11009845 chr2R 11018989 11019038 roo 11 9187 3.5 3.5 3.5 2.4 9243 chr2R 11009795 intron luna - chr2R 11014416 intron luna - chr2R 11019038 intron luna - chr2R_11_11010001 chr2R_11010001 RAL-894 765 chr2R 11154196 11154234 chr2R 11154335 11154373 4 139 0.5 1.0 0.8 2.2 177 chr2R 11154196 intron CG13229 - chr2R 11154284 intron CG13229 - chr2R 11154373 intron CG13229 - chr2R_4_11150001 chr2R_11150001 RAL-894 766 chr2R 11158847 11158892 chr2R 11159036 11159081 14 187 3.0 4.0 3.5 3.1 234 chr2R 11158847 intron CG13229 - chr2R 11158964 intron CG13229 - chr2R 11159081 intron CG13229 - chr2R_14_11155001 chr2R_11155001 RAL-894 767 chr2R 11168045 11168092 chr2R 11168146 11168193 11 100 7.0 3.0 5.0 1.8 148 chr2R 11168045 intron,intron CG13229 -,shn + chr2R 11168119 intron,intron CG13229 -,shn + chr2R 11168193 intron,intron CG13229 -,shn + chr2R_11_11165001 chr2R_11165001 RAL-894 768 chr2R 11179250 11179285 chr2R 11179356 11179375 9 102 0.5 4.0 2.2 2.8 125 chr2R 11179250 intron shn + chr2R 11179312 intron shn + chr2R 11179375 intron shn + chr2R_9_11175001 chr2R_11175001 RAL-894 769 chr2R 11207801 11207825 chr2R 11208009 11208030 BS 10 208 7.5 12.5 10.0 0.9 229 chr2R 11207801 intron shn + chr2R 11207916 intron shn + chr2R 11208030 intron shn + chr2R_10_11205001 chr2R_11205001 RAL-894 770 chr2R 11207831 11207847 chr2R 11208008 11208046 BS 5 197 6.0 11.5 8.8 0.5 215 chr2R 11207831 intron shn + chr2R 11207938 intron shn + chr2R 11208046 intron shn + chr2R_5_11205001 chr2R_11205001 RAL-894 771 chr2R 11297620 11297634 chr2R 11301964 11301978 flea 4 4343 6.0 0.0 3.0 1.0 4358 chr2R 11297620 intergenic CG42336 - chr2R 11299799 intergenic not near genes chr2R 11301978 5` UTR CG7741 + chr2R_4_11295001 chr2R_11295001 RAL-894 772 chr2R 11402233 11402243 chr2R 11402358 11402368 4 125 4.0 5.0 4.5 0.7 135 chr2R 11402233 intergenic not near genes chr2R 11402300 intergenic not near genes chr2R 11402368 intergenic not near genes chr2R_4_11400001 chr2R_11400001 RAL-894 773 chr2R 11404774 11404784 chr2R 11404873 11404889 5 104 2.5 3.0 2.8 1.3 115 chr2R 11404774 intergenic not near genes chr2R 11404832 intergenic not near genes chr2R 11404889 intergenic not near genes chr2R_5_11400001 chr2R_11400001 RAL-894 774 chr2R 11415516 11415542 chr2R 11418670 11418711 opus 5 3153 2.0 3.5 2.8 1.3 3195 chr2R 11415516 intron Drip - chr2R 11417114 intron Drip - chr2R 11418711 intron Drip - chr2R_5_11415001 chr2R_11415001 RAL-894 775 chr2R 11436607 11436621 chr2R 11436733 11436747 9 126 0.0 6.0 3.0 2.2 140 chr2R 11436607 intron CG7777 + chr2R 11436677 intron CG7777 + chr2R 11436747 intron CG7777 + chr2R_9_11435001 chr2R_11435001 RAL-894 776 chr2R 11453037 11453087 chr2R 11453233 11453258 6 189 1.5 3.0 2.2 1.9 221 chr2R 11453037 intron E(Pc) + chr2R 11453148 intron E(Pc) + chr2R 11453258 intron E(Pc) + chr2R_6_11450001 chr2R_11450001 RAL-894 777 chr2R 11472639 11472676 chr2R 11473854 11473857 pogo 11 1213 2.5 3.5 3.0 2.8 1218 chr2R 11472639 intergenic not near genes chr2R 11473248 intergenic not near genes chr2R 11473857 intergenic not near genes chr2R_11_11470001 chr2R_11470001 RAL-894 778 chr2R 11497630 11497636 chr2R 11497729 11497735 4 99 4.5 2.5 3.5 0.9 105 chr2R 11497630 intron inv + chr2R 11497682 intron inv + chr2R 11497735 intron inv + chr2R_4_11495001 chr2R_11495001 RAL-894 779 chr2R 11724140 11724184 chr2R 11724242 11724287 6 101 3.0 1.0 2.0 2.0 147 chr2R 11724140 intron pyr + chr2R 11724214 intron pyr + chr2R 11724287 intron pyr + chr2R_6_11720001 chr2R_11720001 RAL-894 780 chr2R 11861982 11862024 chr2R 11862087 11862129 13 104 2.0 5.0 3.5 2.9 147 chr2R 11861982 3` UTR CG34230 + chr2R 11862056 intergenic CG34230 +,TwdlBeta - chr2R 11862129 intergenic CG34230 +,TwdlBeta - chr2R_13_11860001 chr2R_11860001 RAL-894 781 chr2R 11932550 11932591 chr2R 11932687 11932698 7 133 3.5 3.5 3.5 1.6 148 chr2R 11932550 intergenic not near genes chr2R 11932624 intergenic not near genes chr2R 11932698 intergenic not near genes chr2R_7_11930001 chr2R_11930001 RAL-894 782 chr2R 12093932 12093973 chr2R 12094065 12094106 9 128 2.0 1.5 1.8 3.2 174 chr2R 12093932 intron jeb - chr2R 12094019 intron jeb - chr2R 12094106 intron jeb - chr2R_9_12090001 chr2R_12090001 RAL-894 783 chr2R 12124810 12124860 chr2R 12124914 12124954 9 99 1.5 0.5 1.0 4.5 144 chr2R 12124810 intergenic not near genes chr2R 12124882 intergenic not near genes chr2R 12124954 intergenic not near genes chr2R_9_12120001 chr2R_12120001 RAL-894 784 chr2R 12185982 12186037 chr2R 12186097 12186130 24 111 4.0 5.5 4.8 4.1 148 chr2R 12185982 intron Cyp6g1 + chr2R 12186056 intron Cyp6g1 + chr2R 12186130 intron Cyp6g1 + chr2R_24_12185001 chr2R_12185001 RAL-894 785 chr2R 12210120 12210163 chr2R 12210221 12210263 13 97 4.0 6.0 5.0 2.2 143 chr2R 12210120 exon Sr-CII - chr2R 12210192 intron Sr-CII - chr2R 12210263 exon Sr-CII - chr2R_13_12210001 chr2R_12210001 RAL-894 786 chr2R 12236215 12236235 chr2R 12236326 12236340 6 109 8.0 4.0 6.0 0.9 125 chr2R 12236215 intergenic not near genes chr2R 12236278 intergenic not near genes chr2R 12236340 intergenic not near genes chr2R_6_12235001 chr2R_12235001 RAL-894 787 chr2R 12244968 12244975 chr2R 12245026 12245065 4 82 1.0 7.0 4.0 0.8 97 chr2R 12244968 intergenic CG43244 - chr2R 12245016 intergenic CG43244 - chr2R 12245065 intergenic CG43244 - chr2R_4_12245001 chr2R_12245001 RAL-894 788 chr2R 12255711 12255751 chr2R 12255845 12255881 10 135 3.5 3.5 3.5 2.2 170 chr2R 12255711 intergenic CG13168 + chr2R 12255796 intergenic CG13168 + chr2R 12255881 intergenic CG13168 + chr2R_10_12255001 chr2R_12255001 RAL-894 789 chr2R 12279044 12279055 chr2R 12279177 12279188 7 133 3.0 5.0 4.0 1.4 144 chr2R 12279044 intergenic Cam + chr2R 12279116 intergenic Cam + chr2R 12279188 intergenic Cam + chr2R_7_12275001 chr2R_12275001 RAL-894 790 chr2R 12334872 12334897 chr2R 12334970 12334985 4 96 8.0 1.5 4.8 0.7 113 chr2R 12334872 intergenic CG8490 + chr2R 12334928 intergenic CG8490 + chr2R 12334985 intergenic CG8490 + chr2R_4_12330001 chr2R_12330001 RAL-894 791 chr2R 12363366 12363408 chr2R 12363818 12363840 13 448 3.0 0.0 1.5 5.2 474 chr2R 12363366 intergenic CG30043 + chr2R 12363603 intergenic CG30043 + chr2R 12363840 intergenic not near genes chr2R_13_12360001 chr2R_12360001 RAL-894 792 chr2R 12385355 12385373 chr2R 12385431 12385467 4 85 0.5 4.0 2.2 1.2 112 chr2R 12385355 intergenic not near genes chr2R 12385411 intergenic not near genes chr2R 12385467 intergenic not near genes chr2R_4_12385001 chr2R_12385001 RAL-894 793 chr2R 12522419 12522450 chr2R 12522510 12522542 10 98 3.5 4.0 3.8 2.1 123 chr2R 12522419 exon CG33632 + chr2R 12522480 exon CG33632 + chr2R 12522542 intron CG33632 + chr2R_10_12520001 chr2R_12520001 RAL-894 794 chr2R 12527272 12527283 chr2R 12527498 12527502 4 223 4.0 6.0 5.0 0.7 230 chr2R 12527272 intergenic not near genes chr2R 12527387 intergenic not near genes chr2R 12527502 intergenic not near genes chr2R_4_12525001 chr2R_12525001 RAL-894 795 chr2R 12527285 12527301 chr2R 12527489 12527502 5 215 1.5 5.0 3.2 1.2 217 chr2R 12527285 intergenic not near genes chr2R 12527394 intergenic not near genes chr2R 12527502 intergenic not near genes chr2R_5_12525001 chr2R_12525001 RAL-894 796 chr2R 12529254 12529292 chr2R 12529540 12529574 6 286 6.0 2.5 4.2 1.2 320 chr2R 12529254 5` UTR fra + chr2R 12529414 5` UTR fra + chr2R 12529574 5` UTR fra + chr2R_6_12525001 chr2R_12525001 RAL-894 797 chr2R 12565560 12565594 chr2R 12565963 12565997 9 403 0.0 2.0 1.0 4.5 437 chr2R 12565560 intergenic not near genes chr2R 12565778 intergenic Cyp301a1 + chr2R 12565997 intergenic Cyp301a1 + chr2R_9_12565001 chr2R_12565001 RAL-894 798 chr2R 12610702 12610746 chr2R 12610817 12610845 15 110 3.5 2.5 3.0 3.8 143 chr2R 12610702 exon Amph + chr2R 12610774 intron Amph + chr2R 12610845 intron Amph + chr2R_15_12610001 chr2R_12610001 RAL-894 799 chr2R 12625515 12625523 chr2R 12625608 12625611 4 94 4.0 5.5 4.8 0.7 96 chr2R 12625515 intergenic CG30054 +,CG17760 + chr2R 12625563 intergenic CG30054 +,CG17760 + chr2R 12625611 intergenic CG17760 +,CG30054 + chr2R_4_12625001 chr2R_12625001 RAL-894 800 chr2R 12643771 12643812 chr2R 12643867 12643892 11 92 6.5 1.5 4.0 2.2 121 chr2R 12643771 intron CG8785 - chr2R 12643832 intron CG8785 - chr2R 12643892 exon CG8785 - chr2R_11_12640001 chr2R_12640001 RAL-894 801 chr2R 12670471 12670501 chr2R 12670583 12670613 4 112 0.5 0.0 0.2 3.3 142 chr2R 12670471 intergenic CG42708 -,nemy - chr2R 12670542 3` UTR CG42708 - chr2R 12670613 3` UTR CG42708 - chr2R_4_12670001 chr2R_12670001 RAL-894 802 chr2R 12707509 12707515 chr2R 12715895 12715901 roo 4 8386 4.0 3.0 3.5 0.9 8392 chr2R 12707509 intron CG42663 + chr2R 12711705 intron CG42663 + chr2R 12715901 intron CG42663 + chr2R_4_12710001 chr2R_12710001 RAL-894 803 chr2R 12722045 12722067 chr2R 12722176 12722186 6 126 4.5 7.0 5.8 0.9 141 chr2R 12722045 intron CG42663 + chr2R 12722116 intron CG42663 + chr2R 12722186 intron CG42663 + chr2R_6_12720001 chr2R_12720001 RAL-894 804 chr2R 12722069 12722093 chr2R 12722174 12722190 4 100 1.0 6.5 3.8 0.8 121 chr2R 12722069 intron CG42663 + chr2R 12722130 intron CG42663 + chr2R 12722190 intron CG42663 + chr2R_4_12720001 chr2R_12720001 RAL-894 805 chr2R 12808297 12808347 chr2R 12808412 12808462 7 115 3.0 2.0 2.5 2.0 165 chr2R 12808297 intergenic CG17580 + chr2R 12808380 intergenic not near genes chr2R 12808462 intergenic not near genes chr2R_7_12805001 chr2R_12805001 RAL-894 806 chr2R 13136848 13136860 chr2R 13141665 13141678 Doc 4 4815 3.5 2.5 3.0 1.0 4830 chr2R 13136848 exon Cap-G + chr2R 13139263 intron Cap-G + chr2R 13141678 intron Cap-G + chr2R_4_13135001 chr2R_13135001 RAL-894 807 chr2R 13167388 13167429 chr2R 13167490 13167531 13 102 4.0 2.0 3.0 3.2 143 chr2R 13167388 intron GLaz - chr2R 13167460 intron GLaz - chr2R 13167531 intron GLaz - chr2R_13_13165001 chr2R_13165001 RAL-894 808 chr2R 13261166 13261179 chr2R 13261265 13261294 8 112 1.5 9.0 5.2 1.3 128 chr2R 13261166 intron CG42319 + chr2R 13261230 intron CG42319 + chr2R 13261294 intron CG42319 + chr2R_8_13260001 chr2R_13260001 RAL-894 809 chr2R 13321921 13321930 chr2R 13322047 13322056 4 126 1.0 5.5 3.2 1.0 135 chr2R 13321921 intergenic not near genes chr2R 13321988 intergenic not near genes chr2R 13322056 intergenic not near genes chr2R_4_13320001 chr2R_13320001 RAL-894 810 chr2R 13321944 13321960 chr2R 13322039 13322080 4 117 0.5 4.5 2.5 1.1 136 chr2R 13321944 intergenic not near genes chr2R 13322012 intergenic not near genes chr2R 13322080 intergenic not near genes chr2R_4_13320001 chr2R_13320001 RAL-894 811 chr2R 13432919 13432959 chr2R 13433014 13433050 12 92 3.0 5.5 4.2 2.3 131 chr2R 13432919 intron CG42321 - chr2R 13432984 intron CG42321 - chr2R 13433050 intron,5` UTR CG42321 -,CG30065 + chr2R_12_13430001 chr2R_13430001 RAL-894 812 chr2R 13439095 13439140 chr2R 13439224 13439263 11 130 3.0 2.0 2.5 3.1 168 chr2R 13439095 intergenic CG42321 -,cnn - chr2R 13439179 intergenic CG42321 -,cnn - chr2R 13439263 intergenic cnn -,CG42321 - chr2R_11_13435001 chr2R_13435001 RAL-894 813 chr2R 13536950 13537004 chr2R 13537053 13537107 17 99 2.5 6.5 4.5 3.1 157 chr2R 13536950 intergenic CG6145 - chr2R 13537028 intergenic CG6145 - chr2R 13537107 intergenic CG6145 - chr2R_17_13535001 chr2R_13535001 RAL-894 814 chr2R 13580483 13580518 chr2R 13580853 13580855 jockey 4 361 6.0 4.5 5.2 0.6 372 chr2R 13580483 3` UTR CG6191 - chr2R 13580669 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580855 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_4_13580001 chr2R_13580001 RAL-894 815 chr2R 13632305 13632313 chr2R 13632413 13632421 4 108 3.5 6.5 5.0 0.7 116 chr2R 13632305 intron fas + chr2R 13632363 intron fas + chr2R 13632421 intron fas + chr2R_4_13630001 chr2R_13630001 RAL-894 816 chr2R 13728114 13728161 chr2R 13735791 13735838 opus 19 7677 4.5 5.5 5.0 3.2 7724 chr2R 13728114 intron fas + chr2R 13731976 intron fas + chr2R 13735838 intron fas + chr2R_19_13730001 chr2R_13730001 RAL-894 817 chr2R 13768988 13769005 chr2R 13769079 13769124 6 105 3.0 4.0 3.5 1.3 136 chr2R 13768988 intergenic not near genes chr2R 13769056 intergenic not near genes chr2R 13769124 intergenic not near genes chr2R_6_13765001 chr2R_13765001 RAL-894 818 chr2R 13925828 13925871 chr2R 13926024 13926067 20 195 2.5 4.5 3.5 4.4 239 chr2R 13925828 intron shot - chr2R 13925948 intron shot - chr2R 13926067 intron shot - chr2R_20_13925001 chr2R_13925001 RAL-894 819 chr2R 13979653 13979697 chr2R 13979773 13979828 14 125 4.5 4.5 4.5 2.5 175 chr2R 13979653 5` UTR CG6701 - chr2R 13979740 5` UTR CG6701 - chr2R 13979828 5` UTR CG6701 - chr2R_14_13975001 chr2R_13975001 RAL-894 820 chr2R 14037244 14037298 chr2R 14037347 14037395 5 98 0.0 3.5 1.8 1.8 151 chr2R 14037244 intron mam + chr2R 14037320 intron mam + chr2R 14037395 intron mam + chr2R_5_14035001 chr2R_14035001 RAL-894 821 chr2R 14378974 14379016 chr2R 14379447 14379494 13 477 3.0 3.5 3.2 3.1 520 chr2R 14378974 intron Dh44-R1 + chr2R 14379234 intron Dh44-R1 + chr2R 14379494 intron Dh44-R1 + chr2R_13_14375001 chr2R_14375001 RAL-894 822 chr2R 14386416 14386467 chr2R 14386523 14386574 16 105 2.5 6.0 4.2 3.1 158 chr2R 14386416 intergenic not near genes chr2R 14386495 intergenic not near genes chr2R 14386574 intergenic not near genes chr2R_16_14385001 chr2R_14385001 RAL-894 823 chr2R 14467289 14467317 chr2R 14476467 14476472 roo 4 9172 3.5 4.5 4.0 0.8 9183 chr2R 14467289 intergenic not near genes chr2R 14471880 intergenic not near genes chr2R 14476472 5` UTR CR44462 + chr2R_4_14470001 chr2R_14470001 RAL-894 824 chr2R 14497370 14497416 chr2R 14498556 14498601 1360 13 1180 8.5 1.5 5.0 2.2 1231 chr2R 14497370 3` UTR Cpsf160 - chr2R 14497986 intron Cpsf160 - chr2R 14498601 3` UTR Cpsf160 - chr2R_13_14495001 chr2R_14495001 RAL-894 825 chr2R 14514465 14514500 chr2R 14514581 14514583 5 104 4.0 4.0 4.0 1.0 118 chr2R 14514465 intron,intron Cpr51A -,CG30197 + chr2R 14514524 intron,intron Cpr51A -,CG30197 + chr2R 14514583 intron,intron Cpr51A -,CG30197 + chr2R_5_14510001 chr2R_14510001 RAL-894 826 chr2R 14530757 14530790 chr2R 14530845 14530867 5 81 0.5 1.5 1.0 2.5 110 chr2R 14530757 intron ttv + chr2R 14530812 intron ttv + chr2R 14530867 intron ttv + chr2R_5_14530001 chr2R_14530001 RAL-894 827 chr2R 14634264 14634316 chr2R 14634372 14634399 13 100 4.5 3.5 4.0 2.6 135 chr2R 14634264 intergenic not near genes chr2R 14634332 intergenic not near genes chr2R 14634399 intergenic not near genes chr2R_13_14630001 chr2R_14630001 RAL-894 828 chr2R 14712383 14712432 chr2R 14712484 14712528 12 94 3.0 6.0 4.5 2.2 145 chr2R 14712383 intron mspo - chr2R 14712456 intron mspo - chr2R 14712528 intron mspo - chr2R_12_14710001 chr2R_14710001 RAL-894 829 chr2R 14729938 14729991 chr2R 14730042 14730095 5 91 3.5 2.0 2.8 1.3 157 chr2R 14729938 intergenic not near genes chr2R 14730016 intergenic not near genes chr2R 14730095 intergenic not near genes chr2R_5_14730001 chr2R_14730001 RAL-894 830 chr2R 14786015 14786061 chr2R 14786128 14786174 13 112 0.0 3.0 1.5 5.2 159 chr2R 14786015 intron kn - chr2R 14786094 intron kn - chr2R 14786174 intron kn - chr2R_13_14785001 chr2R_14785001 RAL-894 831 chr2R 14796331 14796356 chr2R 14796448 14796473 6 115 6.0 6.0 6.0 0.9 142 chr2R 14796331 intron kn - chr2R 14796402 intron kn - chr2R 14796473 intron kn - chr2R_6_14795001 chr2R_14795001 RAL-894 832 chr2R 14826380 14826393 chr2R 14826504 14826517 4 124 2.5 0.0 1.2 1.8 137 chr2R 14826380 intergenic not near genes chr2R 14826448 intergenic not near genes chr2R 14826517 intergenic not near genes chr2R_4_14825001 chr2R_14825001 RAL-894 833 chr2R 14889188 14889229 chr2R 14897816 14897845 Max-element 8 8622 11.5 0.0 5.8 1.2 8657 chr2R 14889188 intergenic Cyp6a8 - chr2R 14893516 intergenic not near genes chr2R 14897845 intergenic not near genes chr2R_8_14890001 chr2R_14890001 RAL-894 834 chr2R 14911681 14911721 chr2R 14911824 14911854 13 141 6.0 5.0 5.5 2.0 173 chr2R 14911681 intron CG10249 - chr2R 14911768 intron CG10249 - chr2R 14911854 intron CG10249 - chr2R_13_14910001 chr2R_14910001 RAL-894 835 chr2R 14919135 14919174 chr2R 14919264 14919303 11 128 3.5 0.0 1.8 3.9 168 chr2R 14919135 intron CG10249 - chr2R 14919219 intron CG10249 - chr2R 14919303 intron CG10249 - chr2R_11_14915001 chr2R_14915001 RAL-894 836 chr2R 14922123 14922173 chr2R 14922219 14922266 25 90 3.5 3.5 3.5 5.6 143 chr2R 14922123 intron CG10249 - chr2R 14922194 intron CG10249 - chr2R 14922266 intron CG10249 - chr2R_25_14920001 chr2R_14920001 RAL-894 837 chr2R 14934442 14934453 chr2R 14934547 14934559 4 106 6.0 0.0 3.0 1.0 117 chr2R 14934442 intron CG10253 - chr2R 14934500 intron CG10253 - chr2R 14934559 intron CG10253 - chr2R_4_14930001 chr2R_14930001 RAL-894 838 chr2R 14955650 14955668 chr2R 14955759 14955777 8 108 12.0 0.0 6.0 1.1 127 chr2R 14955650 intron aPKC - chr2R 14955714 intron aPKC - chr2R 14955777 intron aPKC - chr2R_8_14955001 chr2R_14955001 RAL-894 839 chr2R 14957644 14957668 chr2R 14957759 14957783 8 115 4.5 0.5 2.5 2.3 139 chr2R 14957644 intron aPKC - chr2R 14957714 intron aPKC - chr2R 14957783 intron aPKC - chr2R_8_14955001 chr2R_14955001 RAL-894 840 chr2R 15004713 15004724 chr2R 15005062 15005071 jockey 5 347 3.5 2.5 3.0 1.2 358 chr2R 15004713 intergenic not near genes chr2R 15004892 intergenic not near genes chr2R 15005071 intergenic not near genes chr2R_5_15000001 chr2R_15000001 RAL-894 841 chr2R 15004730 15004753 chr2R 15005060 15005102 jockey 8 339 2.0 2.0 2.0 2.7 372 chr2R 15004730 intergenic not near genes chr2R 15004916 intergenic not near genes chr2R 15005102 intergenic not near genes chr2R_8_15000001 chr2R_15000001 RAL-894 842 chr2R 15015441 15015470 chr2R 15022884 15022914 mdg1 10 7440 1.5 5.5 3.5 2.2 7473 chr2R 15015441 intron hbs + chr2R 15019178 intron hbs + chr2R 15022914 intron hbs + chr2R_10_15015001 chr2R_15015001 RAL-894 843 chr2R 15015471 15015485 chr2R 15022879 15022907 mdg1 5 7430 0.5 3.5 2.0 1.7 7436 chr2R 15015471 intron hbs + chr2R 15019189 intron hbs + chr2R 15022907 intron hbs + chr2R_5_15015001 chr2R_15015001 RAL-894 844 chr2R 15084965 15085001 chr2R 15092027 15092070 297 6 7065 4.0 4.0 4.0 1.2 7105 chr2R 15084965 intergenic not near genes chr2R 15088518 intergenic not near genes chr2R 15092070 5` UTR CR44457 + chr2R_6_15085001 chr2R_15085001 RAL-894 845 chr2R 15103917 15103948 chr2R 15104017 15104063 7 111 0.5 3.0 1.8 2.5 146 chr2R 15103917 intergenic not near genes chr2R 15103990 intergenic not near genes chr2R 15104063 intergenic not near genes chr2R_7_15100001 chr2R_15100001 RAL-894 846 chr2R 15119296 15119349 chr2R 15127797 15127830 Tirant 9 8485 4.0 2.5 3.2 2.1 8534 chr2R 15119296 intron chn + chr2R 15123563 intron chn + chr2R 15127830 intron chn + chr2R_9_15120001 chr2R_15120001 RAL-894 847 chr2R 15133469 15133511 chr2R 15133568 15133571 6 89 3.0 6.5 4.8 1.0 102 chr2R 15133469 intron chn + chr2R 15133520 intron chn + chr2R 15133571 intron chn + chr2R_6_15130001 chr2R_15130001 RAL-894 848 chr2R 15137948 15137987 chr2R 15138048 15138059 8 92 4.5 0.5 2.5 2.3 111 chr2R 15137948 intron chn + chr2R 15138004 intron chn + chr2R 15138059 intron chn + chr2R_8_15135001 chr2R_15135001 RAL-894 849 chr2R 15156296 15156342 chr2R 15156398 15156445 9 103 3.5 1.5 2.5 2.6 149 chr2R 15156296 intron igl + chr2R 15156370 intron igl + chr2R 15156445 intron igl + chr2R_9_15155001 chr2R_15155001 RAL-894 850 chr2R 15201217 15201259 chr2R 15201328 15201370 10 110 4.5 6.0 5.2 1.6 153 chr2R 15201217 intergenic GPHR -,CG11807 + chr2R 15201294 5` UTR CG11807 + chr2R 15201370 5` UTR CG11807 + chr2R_10_15200001 chr2R_15200001 RAL-894 851 chr2R 15330187 15330232 chr2R 15330341 15330386 6 154 3.0 3.0 3.0 1.5 199 chr2R 15330187 intergenic CR44371 - chr2R 15330286 intergenic CR44371 - chr2R 15330386 intergenic CR44371 - chr2R_6_15330001 chr2R_15330001 RAL-894 852 chr2R 15606112 15606130 chr2R 15606209 15606215 6 95 4.0 1.0 2.5 1.7 103 chr2R 15606112 intergenic not near genes chr2R 15606164 intergenic not near genes chr2R 15606215 intergenic not near genes chr2R_6_15605001 chr2R_15605001 RAL-894 853 chr2R 15696498 15696551 chr2R 15696641 15696694 16 142 4.0 5.5 4.8 2.8 196 chr2R 15696498 intergenic CG33461 +,CG33462 + chr2R 15696596 intergenic CG33461 +,CG33462 + chr2R 15696694 intergenic CG33462 +,CG33461 + chr2R_16_15695001 chr2R_15695001 RAL-894 854 chr2R 15710427 15710466 chr2R 15710692 15710731 12 264 2.5 2.0 2.2 3.8 304 chr2R 15710427 intergenic not near genes chr2R 15710579 intergenic not near genes chr2R 15710731 intergenic not near genes chr2R_12_15710001 chr2R_15710001 RAL-894 855 chr2R 15832613 15832651 chr2R 15832743 15832778 6 128 4.5 0.0 2.2 1.9 165 chr2R 15832613 intron,intron tun +,Poxn - chr2R 15832696 intron,intron tun +,Poxn - chr2R 15832778 intron,intron tun +,Poxn - chr2R_6_15830001 chr2R_15830001 RAL-894 856 chr2R 15845135 15845183 chr2R 15845234 15845281 7 96 0.0 0.5 0.2 5.8 146 chr2R 15845135 intron,intron tun +,CG8249 - chr2R 15845208 intron,intron tun +,CG8249 - chr2R 15845281 intron,intron tun +,CG8249 - chr2R_7_15845001 chr2R_15845001 RAL-894 857 chr2R 15930361 15930374 chr2R 15930458 15930464 4 95 1.5 0.0 0.8 2.2 103 chr2R 15930361 intron bdg - chr2R 15930412 intron bdg - chr2R 15930464 intron bdg - chr2R_4_15930001 chr2R_15930001 RAL-894 858 chr2R 16092530 16092571 chr2R 16092644 16092685 6 114 3.0 5.0 4.0 1.2 155 chr2R 16092530 intron Dg - chr2R 16092608 intron Dg - chr2R 16092685 intron Dg - chr2R_6_16090001 chr2R_16090001 RAL-894 859 chr2R 16203695 16203742 chr2R 16203791 16203828 14 92 2.5 2.0 2.2 4.4 133 chr2R 16203695 3` UTR mrj - chr2R 16203762 3` UTR mrj - chr2R 16203828 3` UTR mrj - chr2R_14_16200001 chr2R_16200001 RAL-894 860 chr2R 16245622 16245660 chr2R 16245719 16245768 16 101 6.0 4.5 5.2 2.6 146 chr2R 16245622 intron CngA - chr2R 16245695 intron CngA - chr2R 16245768 intron CngA - chr2R_16_16245001 chr2R_16245001 RAL-894 861 chr2R 16352854 16352864 chr2R 16352949 16352967 5 101 3.0 2.5 2.8 1.3 113 chr2R 16352854 intergenic not near genes chr2R 16352910 intergenic not near genes chr2R 16352967 intergenic not near genes chr2R_5_16350001 chr2R_16350001 RAL-894 862 chr2R 16474324 16474362 chr2R 16474430 16474457 7 104 3.0 5.5 4.2 1.3 133 chr2R 16474324 intergenic not near genes chr2R 16474390 intergenic not near genes chr2R 16474457 intergenic not near genes chr2R_7_16470001 chr2R_16470001 RAL-894 863 chr2R 16489254 16489298 chr2R 16489358 16489392 8 100 4.0 4.5 4.2 1.5 138 chr2R 16489254 intergenic CG33459 + chr2R 16489323 intergenic CG33459 + chr2R 16489392 intergenic CG33459 + chr2R_8_16485001 chr2R_16485001 RAL-894 864 chr2R 16539637 16539665 chr2R 16544852 16544894 copia 5 5224 0.5 1.5 1.0 2.5 5257 chr2R 16539637 intergenic not near genes chr2R 16542266 intergenic not near genes chr2R 16544894 intergenic not near genes chr2R_5_16540001 chr2R_16540001 RAL-894 865 chr2R 16665104 16665151 chr2R 16665208 16665255 19 103 3.0 8.0 5.5 2.9 151 chr2R 16665104 intron Picot - chr2R 16665180 intron Picot - chr2R 16665255 intron Picot - chr2R_19_16665001 chr2R_16665001 RAL-894 866 chr2R 16734946 16734996 chr2R 16735065 16735110 8 113 3.5 5.5 4.5 1.5 164 chr2R 16734946 intergenic not near genes chr2R 16735028 intergenic not near genes chr2R 16735110 intergenic not near genes chr2R_8_16735001 chr2R_16735001 RAL-894 867 chr2R 16775660 16775675 chr2R 16775922 16775961 7 276 3.0 4.5 3.8 1.5 301 chr2R 16775660 3` UTR Arp53D + chr2R 16775810 intergenic Arp53D + chr2R 16775961 intergenic Arp53D + chr2R_7_16775001 chr2R_16775001 RAL-894 868 chr2R 16918078 16918124 chr2R 16918576 16918607 5 490 3.5 0.5 2.0 1.7 529 chr2R 16918078 intergenic not near genes chr2R 16918342 intergenic not near genes chr2R 16918607 intergenic not near genes chr2R_5_16915001 chr2R_16915001 RAL-894 869 chr2R 17007568 17007604 chr2R 17009329 17009360 7 1764 34.0 22.5 28.2 0.2 1792 chr2R 17007568 intergenic CG6805 +,Ehbp1 - chr2R 17008464 exon Ehbp1 - chr2R 17009360 intron Ehbp1 - chr2R_7_17005001 chr2R_17005001 RAL-894 870 chr2R 17079033 17079088 chr2R 17079135 17079189 9 101 3.0 4.0 3.5 2.0 156 chr2R 17079033 intron CG30460 - chr2R 17079111 intron CG30460 - chr2R 17079189 intron CG30460 - chr2R_9_17075001 chr2R_17075001 RAL-894 871 chr2R 17090719 17090747 chr2R 17090828 17090851 5 107 5.5 9.0 7.2 0.6 132 chr2R 17090719 intron Sply - chr2R 17090785 intron Sply - chr2R 17090851 intron Sply - chr2R_5_17090001 chr2R_17090001 RAL-894 872 chr2R 17147224 17147266 chr2R 17152275 17152316 jockey 19 5048 3.5 6.5 5.0 3.2 5092 chr2R 17147224 intergenic not near genes chr2R 17149770 intergenic not near genes chr2R 17152316 intergenic not near genes chr2R_19_17145001 chr2R_17145001 RAL-894 873 chr2R 17188713 17188741 chr2R 17188821 17188849 10 108 2.5 3.0 2.8 2.6 136 chr2R 17188713 intergenic CR44389 - chr2R 17188781 intergenic CR44389 - chr2R 17188849 3` UTR CR44389 - chr2R_10_17185001 chr2R_17185001 RAL-894 874 chr2R 17236511 17236539 chr2R 17241735 17241755 copia 8 5222 2.5 4.0 3.2 1.9 5244 chr2R 17236511 intron mbl + chr2R 17239133 intron mbl + chr2R 17241755 intron mbl + chr2R_8_17235001 chr2R_17235001 RAL-894 875 chr2R 17259124 17259157 chr2R 17259262 17259265 4 129 1.0 0.5 0.8 2.2 141 chr2R 17259124 intron mbl + chr2R 17259194 intron mbl + chr2R 17259265 intron mbl + chr2R_4_17255001 chr2R_17255001 RAL-894 876 chr2R 17331693 17331723 chr2R 17331789 17331789 7 89 3.5 1.0 2.2 2.2 96 chr2R 17331693 intron mbl + chr2R 17331741 intron mbl + chr2R 17331789 intron mbl + chr2R_7_17330001 chr2R_17330001 RAL-894 877 chr2R 17412351 17412389 chr2R 17412474 17412501 10 122 5.5 4.0 4.8 1.7 150 chr2R 17412351 intergenic Prosalpha5 + chr2R 17412426 intergenic Prosalpha5 + chr2R 17412501 intergenic Prosalpha5 + chr2R_10_17410001 chr2R_17410001 RAL-894 878 chr2R 17438881 17438908 chr2R 17439541 17439575 6 669 3.0 4.0 3.5 1.3 694 chr2R 17438881 intron EDTP - chr2R 17439228 intron EDTP - chr2R 17439575 intron EDTP - chr2R_6_17435001 chr2R_17435001 RAL-894 879 chr2R 17458987 17459033 chr2R 17459091 17459138 18 104 3.5 7.0 5.2 2.9 151 chr2R 17458987 intron CG14478 + chr2R 17459062 intron CG14478 + chr2R 17459138 intron CG14478 + chr2R_18_17455001 chr2R_17455001 RAL-894 880 chr2R 17464223 17464245 chr2R 17464379 17464409 6 160 1.5 2.0 1.8 2.1 186 chr2R 17464223 exon CG14478 + chr2R 17464316 3` UTR CG14478 + chr2R 17464409 3` UTR CG14478 + chr2R_6_17460001 chr2R_17460001 RAL-894 881 chr2R 17470333 17470344 chr2R 17470437 17470448 5 103 2.0 1.5 1.8 1.8 115 chr2R 17470333 intron qkr54B + chr2R 17470390 intron qkr54B + chr2R 17470448 intron qkr54B + chr2R_5_17470001 chr2R_17470001 RAL-894 882 chr2R 17470349 17470354 chr2R 17470427 17470458 4 98 2.0 1.5 1.8 1.4 109 chr2R 17470349 intron qkr54B + chr2R 17470404 intron qkr54B + chr2R 17470458 intron qkr54B + chr2R_4_17470001 chr2R_17470001 RAL-894 883 chr2R 17485896 17485947 chr2R 17490686 17490735 F-element 5 4785 2.0 2.5 2.2 1.6 4839 chr2R 17485896 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488316 intron NT5E-2 + chr2R 17490735 intron NT5E-2 + chr2R_5_17485001 chr2R_17485001 RAL-894 884 chr2R 17627747 17627765 chr2R 17628094 17628095 6 343 5.5 4.5 5.0 1.0 348 chr2R 17627747 intron CG10936 - chr2R 17627921 intron CG10936 - chr2R 17628095 intron CG10936 - chr2R_6_17625001 chr2R_17625001 RAL-894 885 chr2R 17627767 17627785 chr2R 17628085 17628132 6 338 1.5 4.0 2.8 1.6 365 chr2R 17627767 intron CG10936 - chr2R 17627950 intron CG10936 - chr2R 17628132 intron CG10936 - chr2R_6_17625001 chr2R_17625001 RAL-894 886 chr2R 17655220 17655234 chr2R 17655276 17655314 4 70 1.0 2.0 1.5 1.6 94 chr2R 17655220 intron CCHa1-R - chr2R 17655267 intron CCHa1-R - chr2R 17655314 intron CCHa1-R - chr2R_4_17655001 chr2R_17655001 RAL-894 887 chr2R 17679581 17679603 chr2R 17679728 17679750 4 147 0.5 6.0 3.2 1.0 169 chr2R 17679581 intron Sema-1b - chr2R 17679666 intron Sema-1b - chr2R 17679750 intron Sema-1b - chr2R_4_17675001 chr2R_17675001 RAL-894 888 chr2R 17709676 17709965 chr2R 17709781 17710076 11 107 11.5 4.0 7.8 1.2 400 chr2R 17709676 intron CG6424 - chr2R 17709876 intron CG6424 - chr2R 17710076 intron CG6424 - chr2R_11_17705001 chr2R_17705001 RAL-894 889 chr2R 17709977 17710008 chr2R 17710088 17710113 5 110 8.0 5.0 6.5 0.7 136 chr2R 17709977 intron CG6424 - chr2R 17710045 intron CG6424 - chr2R 17710113 intron CG6424 - chr2R_5_17710001 chr2R_17710001 RAL-894 890 chr2R 17782345 17782393 chr2R 17783568 17783606 pogo 12 1222 3.0 3.0 3.0 3.0 1261 chr2R 17782345 intergenic CG33981 -,fab1 - chr2R 17782976 intergenic not near genes chr2R 17783606 intergenic mir-31a - chr2R_12_17780001 chr2R_17780001 RAL-894 891 chr2R 17784010 17784050 chr2R 17784269 17784298 pogo 4 256 2.0 2.0 2.0 1.3 288 chr2R 17784010 intergenic mir-31a - chr2R 17784154 intergenic mir-31a - chr2R 17784298 intergenic mir-31a - chr2R_4_17780001 chr2R_17780001 RAL-894 892 chr2R 17918156 17918187 chr2R 17918240 17918274 12 87 5.0 1.5 3.2 2.9 118 chr2R 17918156 intron Elk + chr2R 17918215 intron Elk + chr2R 17918274 intron Elk + chr2R_12_17915001 chr2R_17915001 RAL-894 893 chr2R 17982907 17982952 chr2R 17983010 17983045 14 100 4.0 1.5 2.8 3.7 138 chr2R 17982907 intron dpr13 - chr2R 17982976 intron dpr13 - chr2R 17983045 intron dpr13 - chr2R_14_17980001 chr2R_17980001 RAL-894 894 chr2R 18029231 18029282 chr2R 18029341 18029392 6 106 1.5 2.0 1.8 2.1 161 chr2R 18029231 intergenic not near genes chr2R 18029312 intergenic not near genes chr2R 18029392 intergenic not near genes chr2R_6_18025001 chr2R_18025001 RAL-894 895 chr2R 18042802 18042999 chr2R 18042938 18043112 4 124 0.0 0.0 0.0 4.0 310 chr2R 18042802 3` UTR CG5773 - chr2R 18042957 3` UTR CG5773 - chr2R 18043112 3` UTR CG5773 - chr2R_4_18040001 chr2R_18040001 RAL-894 896 chr2R 18045652 18045686 chr2R 18046024 18046058 jockey 9 372 4.0 5.5 4.8 1.6 406 chr2R 18045652 intergenic not near genes chr2R 18045855 intergenic not near genes chr2R 18046058 intergenic CG5767 - chr2R_9_18045001 chr2R_18045001 RAL-894 897 chr2R 18079145 18079193 chr2R 18079292 18079329 11 145 4.0 5.0 4.5 2.0 184 chr2R 18079145 intron CG34386 + chr2R 18079237 intron CG34386 + chr2R 18079329 intron CG34386 + chr2R_11_18075001 chr2R_18075001 RAL-894 898 chr2R 18111699 18111716 chr2R 18115579 18115600 F-element 10 3885 3.0 0.0 1.5 4.0 3901 chr2R 18111699 intergenic not near genes chr2R 18113650 intergenic not near genes chr2R 18115600 intergenic not near genes chr2R_10_18110001 chr2R_18110001 RAL-894 899 chr2R 18197050 18197091 chr2R 18197149 18197189 14 97 2.5 1.5 2.0 4.7 139 chr2R 18197050 intergenic not near genes chr2R 18197120 intergenic not near genes chr2R 18197189 intergenic not near genes chr2R_14_18195001 chr2R_18195001 RAL-894 900 chr2R 18304645 18304657 chr2R 18304748 18304767 6 107 0.0 3.0 1.5 2.4 122 chr2R 18304645 intron sbb - chr2R 18304706 intron sbb - chr2R 18304767 intron sbb - chr2R_6_18300001 chr2R_18300001 RAL-894 901 chr2R 18308280 18308319 chr2R 18308389 18308434 10 123 3.5 2.0 2.8 2.6 154 chr2R 18308280 intron sbb - chr2R 18308357 intron sbb - chr2R 18308434 intron sbb - chr2R_10_18305001 chr2R_18305001 RAL-894 902 chr2R 18358381 18358412 chr2R 18372606 18372623 roo 17 14227 4.0 4.5 4.2 3.3 14242 chr2R 18358381 intergenic not near genes chr2R 18365502 intergenic not near genes chr2R 18372623 intergenic not near genes chr2R_17_18365001 chr2R_18365001 RAL-894 903 chr2R 18398163 18398191 chr2R 18398253 18398305 7 107 3.0 3.0 3.0 1.8 142 chr2R 18398163 intron GstE10 - chr2R 18398234 intron GstE10 - chr2R 18398305 intron GstE10 - chr2R_7_18395001 chr2R_18395001 RAL-894 904 chr2R 18402482 18402535 chr2R 18402588 18402588 15 97 4.0 8.0 6.0 2.1 106 chr2R 18402482 intergenic not near genes chr2R 18402535 intergenic not near genes chr2R 18402588 intergenic not near genes chr2R_15_18400001 chr2R_18400001 RAL-894 905 chr2R 18405726 18405780 chr2R 18405828 18405880 7 101 1.0 0.5 0.8 3.9 154 chr2R 18405726 intergenic GstE6 +,GstE5 + chr2R 18405803 intergenic GstE6 +,GstE5 + chr2R 18405880 intergenic GstE6 + chr2R_7_18405001 chr2R_18405001 RAL-894 906 chr2R 18408283 18408314 chr2R 18408408 18408433 7 126 2.5 5.5 4.0 1.4 150 chr2R 18408283 exon GstE8 + chr2R 18408358 exon GstE8 + chr2R 18408433 exon GstE8 + chr2R_7_18405001 chr2R_18405001 RAL-894 907 chr2R 18471923 18471930 chr2R 18472019 18472026 5 96 0.5 2.0 1.2 2.3 103 chr2R 18471923 intron CG30116 - chr2R 18471974 intron CG30116 - chr2R 18472026 intron CG30116 - chr2R_5_18470001 chr2R_18470001 RAL-894 908 chr2R 18486838 18486862 chr2R 18487108 18487139 7 271 4.5 4.0 4.2 1.3 301 chr2R 18486838 intron CG30116 - chr2R 18486988 intron CG30116 - chr2R 18487139 intron CG30116 - chr2R_7_18485001 chr2R_18485001 RAL-894 909 chr2R 18486870 18486879 chr2R 18487107 18487126 4 254 3.5 4.0 3.8 0.8 256 chr2R 18486870 intron CG30116 - chr2R 18486998 intron CG30116 - chr2R 18487126 intron CG30116 - chr2R_4_18485001 chr2R_18485001 RAL-894 910 chr2R 18528192 18528222 chr2R 18528277 18528283 10 79 2.0 0.0 1.0 5.0 91 chr2R 18528192 intron CG10924 + chr2R 18528238 intron CG10924 + chr2R 18528283 intron CG10924 + chr2R_10_18525001 chr2R_18525001 RAL-894 911 chr2R 18528534 18528586 chr2R 18528638 18528691 18 103 5.0 4.5 4.8 3.1 157 chr2R 18528534 intron CG10924 + chr2R 18528612 intron CG10924 + chr2R 18528691 intron CG10924 + chr2R_18_18525001 chr2R_18525001 RAL-894 912 chr2R 18575811 18575821 chr2R 18581984 18581990 3S18 7 6186 1.5 3.5 2.5 2.0 6179 chr2R 18575811 intron GEFmeso - chr2R 18578900 intron GEFmeso - chr2R 18581990 intron GEFmeso - chr2R_7_18575001 chr2R_18575001 RAL-894 913 chr2R 18692880 18692910 chr2R 18692987 18693017 11 105 4.0 3.0 3.5 2.4 137 chr2R 18692880 intron Sik3 + chr2R 18692948 intron Sik3 + chr2R 18693017 intron Sik3 + chr2R_11_18690001 chr2R_18690001 RAL-894 914 chr2R 18862295 18862404 chr2R 18862402 18862509 7 116 0.0 0.0 0.0 7.0 214 chr2R 18862295 intergenic Jheh3 - chr2R 18862402 intergenic Jheh3 -,CG43069 + chr2R 18862509 intergenic CG43069 +,Jheh3 - chr2R_7_18860001 chr2R_18860001 RAL-894 915 chr2R 18926493 18926525 chr2R 18926600 18926632 7 105 4.5 4.0 4.2 1.3 139 chr2R 18926493 intron sano + chr2R 18926562 intron sano + chr2R 18926632 intron sano + chr2R_7_18925001 chr2R_18925001 RAL-894 916 chr2R 18930431 18930473 chr2R 18930544 18930585 16 112 4.5 4.0 4.2 3.1 154 chr2R 18930431 intron sano + chr2R 18930508 intron sano + chr2R 18930585 intron sano + chr2R_16_18930001 chr2R_18930001 RAL-894 917 chr2R 18953150 18953189 chr2R 18953245 18953296 13 105 3.0 2.0 2.5 3.7 146 chr2R 18953150 intron sano + chr2R 18953223 intron sano + chr2R 18953296 intron sano + chr2R_13_18950001 chr2R_18950001 RAL-894 918 chr2R 19067703 19067746 chr2R 19067799 19067842 8 94 4.0 1.5 2.8 2.1 139 chr2R 19067703 intron 5-HT1A + chr2R 19067772 intron 5-HT1A + chr2R 19067842 intron 5-HT1A + chr2R_8_19065001 chr2R_19065001 RAL-894 919 chr2R 19233110 19233154 chr2R 19233217 19233254 9 109 4.0 2.5 3.2 2.1 144 chr2R 19233110 intron cora + chr2R 19233182 intron cora + chr2R 19233254 intron cora + chr2R_9_19230001 chr2R_19230001 RAL-894 920 chr2R 19265793 19265829 chr2R 19265945 19265949 4 142 2.5 3.0 2.8 1.1 156 chr2R 19265793 intergenic not near genes chr2R 19265871 intergenic not near genes chr2R 19265949 intergenic not near genes chr2R_4_19265001 chr2R_19265001 RAL-894 921 chr2R 19394895 19394945 chr2R 19394999 19395032 11 97 2.0 2.0 2.0 3.7 137 chr2R 19394895 intron SdhA - chr2R 19394964 intron SdhA - chr2R 19395032 intron SdhA - chr2R_11_19390001 chr2R_19390001 RAL-894 922 chr2R 19536447 19536501 chr2R 19536549 19536603 24 99 3.5 2.0 2.8 6.3 156 chr2R 19536447 intron sm - chr2R 19536525 intron sm - chr2R 19536603 intron sm - chr2R_24_19535001 chr2R_19535001 RAL-894 923 chr2R 19601248 19601294 chr2R 19601358 19601403 18 108 5.0 2.5 3.8 3.8 155 chr2R 19601248 intron sm - chr2R 19601326 intron sm - chr2R 19601403 intron sm - chr2R_18_19600001 chr2R_19600001 RAL-894 924 chr2R 19639567 19639592 chr2R 19639663 19639688 12 94 2.0 3.5 2.8 3.2 121 chr2R 19639567 intergenic not near genes chr2R 19639628 intergenic not near genes chr2R 19639688 intergenic not near genes chr2R_12_19635001 chr2R_19635001 RAL-894 925 chr2R 19776592 19776626 chr2R 19779935 19779969 jockey 7 3340 2.5 5.5 4.0 1.4 3377 chr2R 19776592 intergenic not near genes chr2R 19778280 intergenic not near genes chr2R 19779969 intergenic not near genes chr2R_7_19775001 chr2R_19775001 RAL-894 926 chr2R 19837692 19837742 chr2R 19837811 19837861 9 116 1.5 1.0 1.2 4.1 169 chr2R 19837692 intergenic not near genes chr2R 19837776 intergenic not near genes chr2R 19837861 intergenic not near genes chr2R_9_19835001 chr2R_19835001 RAL-894 927 chr2R 19857671 19857692 chr2R 19857781 19857807 6 114 4.0 3.0 3.5 1.3 136 chr2R 19857671 intergenic not near genes chr2R 19857739 intergenic not near genes chr2R 19857807 intergenic not near genes chr2R_6_19855001 chr2R_19855001 RAL-894 928 chr2R 19858561 19858606 chr2R 19858669 19858714 4 107 0.5 1.5 1.0 2.0 153 chr2R 19858561 intergenic not near genes chr2R 19858638 intergenic not near genes chr2R 19858714 intergenic not near genes chr2R_4_19855001 chr2R_19855001 RAL-894 929 chr2R 19914828 19914856 chr2R 19922260 19922288 mdg1 7 7431 7.5 1.0 4.2 1.3 7460 chr2R 19914828 intergenic not near genes chr2R 19918558 intergenic not near genes chr2R 19922288 intergenic not near genes chr2R_7_19915001 chr2R_19915001 RAL-894 930 chr2R 20002187 20002201 chr2R 20002292 20002326 4 107 2.0 1.0 1.5 1.6 139 chr2R 20002187 intergenic not near genes chr2R 20002256 intergenic not near genes chr2R 20002326 intergenic not near genes chr2R_4_20000001 chr2R_20000001 RAL-894 931 chr2R 20023413 20023419 chr2R 20023520 20023527 4 108 0.0 3.5 1.8 1.4 114 chr2R 20023413 intergenic not near genes chr2R 20023470 intergenic not near genes chr2R 20023527 intergenic not near genes chr2R_4_20020001 chr2R_20020001 RAL-894 932 chr2R 20073838 20073869 chr2R 20073918 20073969 4 93 3.5 1.5 2.5 1.1 131 chr2R 20073838 intergenic not near genes chr2R 20073904 intergenic not near genes chr2R 20073969 intergenic not near genes chr2R_4_20070001 chr2R_20070001 RAL-894 933 chr2R 20080467 20080475 chr2R 20080542 20080572 5 86 5.5 5.5 5.5 0.8 105 chr2R 20080467 intergenic not near genes chr2R 20080520 intergenic not near genes chr2R 20080572 intergenic not near genes chr2R_5_20080001 chr2R_20080001 RAL-894 934 chr2R 20087977 20088027 chr2R 20088105 20088155 5 128 3.5 4.5 4.0 1.0 178 chr2R 20087977 intergenic not near genes chr2R 20088066 intergenic not near genes chr2R 20088155 intergenic not near genes chr2R_5_20085001 chr2R_20085001 RAL-894 935 chr2R 20106131 20106166 chr2R 20106231 20106263 13 111 0.5 3.5 2.0 4.3 132 chr2R 20106131 intergenic not near genes chr2R 20106197 intergenic not near genes chr2R 20106263 intergenic not near genes chr2R_13_20105001 chr2R_20105001 RAL-894 936 chr2R 20171317 20171351 chr2R 20171443 20171476 10 123 1.0 2.0 1.5 4.0 159 chr2R 20171317 intergenic not near genes chr2R 20171396 intergenic not near genes chr2R 20171476 intergenic not near genes chr2R_10_20170001 chr2R_20170001 RAL-894 937 chr2R 20326741 20326793 chr2R 20326836 20326866 11 84 1.0 2.0 1.5 4.4 125 chr2R 20326741 5` UTR MED8 - chr2R 20326804 5` UTR MED8 - chr2R 20326866 intergenic MED8 -,CG8929 + chr2R_11_20325001 chr2R_20325001 RAL-894 938 chr2R 20343475 20343500 chr2R 20343582 20343602 9 104 7.0 4.0 5.5 1.4 127 chr2R 20343475 intergenic CG13870 + chr2R 20343538 intergenic CG13870 + chr2R 20343602 intergenic CG13870 + chr2R_9_20340001 chr2R_20340001 RAL-894 939 chr2R 20343504 20343521 chr2R 20343581 20343628 6 95 3.0 4.0 3.5 1.3 124 chr2R 20343504 intergenic CG13870 + chr2R 20343566 intergenic CG13870 + chr2R 20343628 intergenic CG13870 + chr2R_6_20340001 chr2R_20340001 RAL-894 940 chr2R 20395349 20395391 chr2R 20395621 20395665 4 275 1.0 1.5 1.2 1.8 316 chr2R 20395349 intergenic not near genes chr2R 20395507 intergenic not near genes chr2R 20395665 intergenic not near genes chr2R_4_20395001 chr2R_20395001 RAL-894 941 chr2R 20419389 20419408 chr2R 20419477 20419487 5 90 0.5 2.0 1.2 2.3 98 chr2R 20419389 intergenic not near genes chr2R 20419438 intergenic not near genes chr2R 20419487 intergenic not near genes chr2R_5_20415001 chr2R_20415001 RAL-894 942 chr2R 20533899 20533904 chr2R 20534041 20534046 4 142 1.0 3.5 2.2 1.2 147 chr2R 20533899 3` UTR CG30154 + chr2R 20533972 intergenic CG30154 +,CG18067 + chr2R 20534046 intergenic CG30154 +,CG18067 + chr2R_4_20530001 chr2R_20530001 RAL-894 943 chr2R 20541974 20542017 chr2R 20542065 20542115 14 94 4.5 4.0 4.2 2.7 141 chr2R 20541974 intergenic not near genes chr2R 20542044 intergenic not near genes chr2R 20542115 intergenic not near genes chr2R_14_20540001 chr2R_20540001 RAL-894 944 chr2R 20590653 20590658 chr2R 20590752 20590757 4 98 5.5 4.0 4.8 0.7 104 chr2R 20590653 intron bl + chr2R 20590705 intron bl + chr2R 20590757 intron bl + chr2R_4_20590001 chr2R_20590001 RAL-894 945 chr2R 20739438 20739475 chr2R 20744215 20744235 F-element 7 4778 2.5 1.5 2.0 2.3 4797 chr2R 20739438 intron dpr + chr2R 20741836 intron dpr + chr2R 20744235 intron dpr + chr2R_7_20740001 chr2R_20740001 RAL-894 946 chr2R 20772265 20772310 chr2R 20772366 20772397 12 94 2.0 3.0 2.5 3.4 132 chr2R 20772265 intergenic not near genes chr2R 20772331 intergenic not near genes chr2R 20772397 intergenic not near genes chr2R_12_20770001 chr2R_20770001 RAL-894 947 chr2R 20783291 20783322 chr2R 20788083 20788113 F-element 8 4789 4.5 6.0 5.2 1.3 4822 chr2R 20783291 intergenic not near genes chr2R 20785702 intergenic not near genes chr2R 20788113 intergenic CG43666 - chr2R_8_20785001 chr2R_20785001 RAL-894 948 chr2R 20838059 20838082 chr2R 20838146 20838183 8 97 0.0 1.5 0.8 4.4 124 chr2R 20838059 intron CR44667 + chr2R 20838121 intron CR44667 + chr2R 20838183 intron CR44667 + chr2R_8_20835001 chr2R_20835001 RAL-894 949 chr2R 20865481 20865525 chr2R 20865578 20865606 9 85 4.5 2.0 3.2 2.1 125 chr2R 20865481 intron CG15227 + chr2R 20865544 intron CG15227 + chr2R 20865606 intron CG15227 + chr2R_9_20865001 chr2R_20865001 RAL-894 950 chr2R 20870917 20870955 chr2R 20871145 20871173 10 227 0.0 2.0 1.0 5.0 256 chr2R 20870917 intron Ipk1 + chr2R 20871045 intron Ipk1 + chr2R 20871173 intron Ipk1 + chr2R_10_20870001 chr2R_20870001 RAL-894 951 chr2R 20953277 20953290 chr2R 20953384 20953397 5 107 1.0 2.0 1.5 2.0 120 chr2R 20953277 intergenic not near genes chr2R 20953337 intergenic not near genes chr2R 20953397 intergenic not near genes chr2R_5_20950001 chr2R_20950001 RAL-894 952 chr2R 20967007 20967054 chr2R 20967102 20967151 7 96 3.0 0.0 1.5 2.8 144 chr2R 20967007 intergenic not near genes chr2R 20967079 intergenic not near genes chr2R 20967151 intergenic not near genes chr2R_7_20965001 chr2R_20965001 RAL-894 953 chr2R 21103522 21103549 chr2R 21103622 21103633 10 97 3.5 0.5 2.0 3.3 111 chr2R 21103522 intron ktub + chr2R 21103578 intron ktub + chr2R 21103633 intron ktub + chr2R_10_21100001 chr2R_21100001 RAL-894 954 chr2R 21136892 21136916 chr2R 21136991 21137020 15 103 4.0 6.5 5.2 2.4 128 chr2R 21136892 intron Magi - chr2R 21136956 intron Magi - chr2R 21137020 intron Magi - chr2R_15_21135001 chr2R_21135001 RAL-894 955 chr2R 21151099 21151103 chr2R 21153752 21153756 opus 4 2653 6.0 5.5 5.8 0.6 2657 chr2R 21151099 intron CG30389 - chr2R 21152428 intron CG30389 - chr2R 21153756 intron CG30389 - chr2R_4_21150001 chr2R_21150001 RAL-894 956 chr2R 21151107 21151146 chr2R 21153749 21153799 opus 15 2651 3.5 5.5 4.5 2.7 2692 chr2R 21151107 intron CG30389 - chr2R 21152453 intron CG30389 - chr2R 21153799 intron CG30389 - chr2R_15_21150001 chr2R_21150001 RAL-894 957 chr2R 21188202 21188247 chr2R 21188303 21188348 9 94 2.5 3.5 3.0 2.2 146 chr2R 21188202 exon tud + chr2R 21188275 intron tud + chr2R 21188348 intron tud + chr2R_9_21185001 chr2R_21185001 RAL-894 958 chr2R 21285419 21285435 chr2R 21285516 21285529 4 94 11.0 5.0 8.0 0.4 110 chr2R 21285419 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285474 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285529 3` UTR,3` UTR MFS16 +,CG10505 - chr2R_4_21285001 chr2R_21285001 RAL-894 959 chr2R 21370499 21370520 chr2R 21370626 21370647 8 124 6.5 2.0 4.2 1.5 148 chr2R 21370499 intron cv-2 - chr2R 21370573 intron cv-2 - chr2R 21370647 intron cv-2 - chr2R_8_21370001 chr2R_21370001 RAL-894 960 chr2R 21373377 21373422 chr2R 21373715 21373734 8 326 1.0 0.5 0.8 4.4 357 chr2R 21373377 intron cv-2 - chr2R 21373556 intron cv-2 - chr2R 21373734 intron cv-2 - chr2R_8_21370001 chr2R_21370001 RAL-894 961 chr2R 21381926 21381938 chr2R 21382033 21382045 4 106 3.5 1.5 2.5 1.1 119 chr2R 21381926 intergenic not near genes chr2R 21381986 intergenic not near genes chr2R 21382045 intergenic not near genes chr2R_4_21380001 chr2R_21380001 RAL-894 962 chr2R 21540675 21540706 chr2R 21540906 21540937 8 230 0.5 4.0 2.2 2.5 262 chr2R 21540675 intron Egfr + chr2R 21540806 intron Egfr + chr2R 21540937 intron Egfr + chr2R_8_21540001 chr2R_21540001 RAL-894 963 chr2R 21595795 21595824 chr2R 21595902 21595918 5 102 2.0 4.5 3.2 1.2 123 chr2R 21595795 intergenic not near genes chr2R 21595856 intergenic not near genes chr2R 21595918 intergenic not near genes chr2R_5_21595001 chr2R_21595001 RAL-894 964 chr2R 21660889 21660909 chr2R 21660976 21661011 15 109 5.0 7.5 6.2 2.1 122 chr2R 21660889 intergenic pirk - chr2R 21660950 intergenic pirk - chr2R 21661011 3` UTR pirk - chr2R_15_21660001 chr2R_21660001 RAL-894 965 chr2R 21699914 21699933 chr2R 21700004 21700041 8 104 7.0 4.0 5.5 1.2 127 chr2R 21699914 intron HmgZ - chr2R 21699978 intron HmgZ - chr2R 21700041 intron HmgZ - chr2R_8_21695001 chr2R_21695001 RAL-894 966 chr2R 21753082 21753113 chr2R 21753567 21753607 roo 18 500 0.5 1.5 1.0 9.0 525 chr2R 21753082 intergenic not near genes chr2R 21753344 intergenic not near genes chr2R 21753607 intergenic not near genes chr2R_18_21750001 chr2R_21750001 RAL-894 967 chr2R 21759539 21759586 chr2R 21759646 21759693 10 96 4.0 4.0 4.0 2.0 154 chr2R 21759539 intergenic not near genes chr2R 21759616 intergenic not near genes chr2R 21759693 intergenic not near genes chr2R_10_21755001 chr2R_21755001 RAL-894 968 chr2R 21809503 21809509 chr2R 21817763 21817769 roo 4 8260 11.0 4.0 7.5 0.5 8266 chr2R 21809503 intergenic not near genes chr2R 21813636 intergenic not near genes chr2R 21817769 intergenic not near genes chr2R_4_21810001 chr2R_21810001 RAL-894 969 chr2R 21906250 21906296 chr2R 21906371 21906382 14 117 4.5 3.5 4.0 2.8 132 chr2R 21906250 intron Fili + chr2R 21906316 intron Fili + chr2R 21906382 intron Fili + chr2R_14_21905001 chr2R_21905001 RAL-894 970 chr2R 21922598 21922622 chr2R 21922681 21922719 6 86 0.5 4.5 2.5 1.7 121 chr2R 21922598 intron Fili + chr2R 21922658 intron Fili + chr2R 21922719 intron Fili + chr2R_6_21920001 chr2R_21920001 RAL-894 971 chr2R 21932267 21932280 chr2R 21932325 21932378 5 77 1.0 1.5 1.2 2.3 111 chr2R 21932267 intron Fili + chr2R 21932322 intron Fili + chr2R 21932378 intron Fili + chr2R_5_21930001 chr2R_21930001 RAL-894 972 chr2R 22009761 22009807 chr2R 22009857 22009901 6 95 2.5 3.5 3.0 1.5 140 chr2R 22009761 intron CG34370 - chr2R 22009831 intron CG34370 - chr2R 22009901 intron CG34370 - chr2R_6_22005001 chr2R_22005001 RAL-894 973 chr2R 22029459 22029505 chr2R 22029617 22029652 13 155 3.5 3.0 3.2 3.1 193 chr2R 22029459 intron CG34370 - chr2R 22029556 intron CG34370 - chr2R 22029652 intron CG34370 - chr2R_13_22025001 chr2R_22025001 RAL-894 974 chr2R 22072680 22072711 chr2R 22072785 22072811 12 102 5.0 7.0 6.0 1.7 131 chr2R 22072680 intron CG11474 - chr2R 22072746 intron CG11474 - chr2R 22072811 exon CG11474 - chr2R_12_22070001 chr2R_22070001 RAL-894 975 chr2R 22095574 22095603 chr2R 22095673 22095703 5 97 5.0 1.0 3.0 1.2 129 chr2R 22095574 intron CG11073 - chr2R 22095638 intron CG11073 - chr2R 22095703 intron CG11073 - chr2R_5_22095001 chr2R_22095001 RAL-894 976 chr2R 22118408 22118451 chr2R 22118499 22118549 15 95 2.0 3.0 2.5 4.3 141 chr2R 22118408 intron Vrp1 - chr2R 22118478 intron Vrp1 - chr2R 22118549 intron Vrp1 - chr2R_15_22115001 chr2R_22115001 RAL-894 977 chr2R 22124286 22124327 chr2R 22124395 22124412 7 105 4.0 3.5 3.8 1.5 126 chr2R 22124286 3` UTR mei-S332 + chr2R 22124349 3` UTR mei-S332 + chr2R 22124412 intergenic mei-S332 +,GM130 - chr2R_7_22120001 chr2R_22120001 RAL-894 978 chr2R 22177433 22177464 chr2R 22179607 22179638 13 2157 20.5 17.5 19.0 0.7 2205 chr2R 22177433 3` UTR CG11170 - chr2R 22178536 intron CG11170 - chr2R 22179638 intron CG11170 - chr2R_13_22175001 chr2R_22175001 RAL-894 979 chr2R 22349688 22349720 chr2R 22351479 22351524 jockey 7 1799 3.5 5.5 4.5 1.3 1836 chr2R 22349688 intron Liprin-gamma - chr2R 22350606 intron Liprin-gamma - chr2R 22351524 intron Liprin-gamma - chr2R_7_22350001 chr2R_22350001 RAL-894 980 chr2R 22360368 22360380 chr2R 22360817 22360830 jockey 4 450 11.0 3.0 7.0 0.5 462 chr2R 22360368 intron Liprin-gamma - chr2R 22360599 intron Liprin-gamma - chr2R 22360830 intron Liprin-gamma - chr2R_4_22360001 chr2R_22360001 RAL-894 981 chr2R 22362642 22362684 chr2R 22362741 22362778 5 95 2.5 6.0 4.2 1.0 136 chr2R 22362642 intron Liprin-gamma - chr2R 22362710 intron Liprin-gamma - chr2R 22362778 intron Liprin-gamma - chr2R_5_22360001 chr2R_22360001 RAL-894 982 chr2R 22460360 22460405 chr2R 22460459 22460504 14 97 5.0 4.0 4.5 2.5 144 chr2R 22460360 intron CG10384 + chr2R 22460432 intron CG10384 + chr2R 22460504 intron CG10384 + chr2R_14_22460001 chr2R_22460001 RAL-894 983 chr2R 22465302 22465341 chr2R 22465521 22465554 BS 10 215 4.0 5.0 4.5 1.8 252 chr2R 22465302 intron CG10384 + chr2R 22465428 intron CG10384 + chr2R 22465554 intron CG10384 + chr2R_10_22465001 chr2R_22465001 RAL-894 984 chr2R 22499851 22499885 chr2R 22499947 22499965 7 90 0.5 6.0 3.2 1.7 114 chr2R 22499851 intron px - chr2R 22499908 intron px - chr2R 22499965 intron px - chr2R_7_22495001 chr2R_22495001 RAL-894 985 chr2R 22503860 22503895 chr2R 22503974 22503983 10 112 0.0 3.0 1.5 4.0 123 chr2R 22503860 intron px - chr2R 22503922 intron px - chr2R 22503983 intron px - chr2R_10_22500001 chr2R_22500001 RAL-894 986 chr2R 22575667 22575683 chr2R 22575746 22575782 8 84 3.0 6.5 4.8 1.4 115 chr2R 22575667 intron dnr1 - chr2R 22575724 intron dnr1 - chr2R 22575782 intron dnr1 - chr2R_8_22575001 chr2R_22575001 RAL-894 987 chr2R 22575684 22575693 chr2R 22575738 22575758 5 76 2.5 6.0 4.2 1.0 74 chr2R 22575684 intron dnr1 - chr2R 22575721 intron dnr1 - chr2R 22575758 intron dnr1 - chr2R_5_22575001 chr2R_22575001 RAL-894 988 chr2R 22623434 22623478 chr2R 22623594 22623613 9 146 3.5 3.5 3.5 2.0 179 chr2R 22623434 intron CG33143 + chr2R 22623524 intron CG33143 + chr2R 22623613 intron CG33143 + chr2R_9_22620001 chr2R_22620001 RAL-894 989 chr2R 22641687 22641720 chr2R 22641796 22641830 9 107 3.5 6.0 4.8 1.6 143 chr2R 22641687 intergenic Ugt58Fa -,RpS24 - chr2R 22641758 intergenic Ugt58Fa -,RpS24 - chr2R 22641830 3` UTR Ugt58Fa - chr2R_9_22640001 chr2R_22640001 RAL-894 990 chr2R 22661551 22661604 chr2R 22661652 22661699 15 99 3.5 3.5 3.5 3.3 148 chr2R 22661551 intergenic CG13510 +,CG13511 +,CG42565 +,CG42566 + chr2R 22661625 intergenic CG13510 +,CG13511 +,CG42565 +,CG42566 + chr2R 22661699 intergenic CG42566 +,CG13510 +,CG13511 +,CG42565 + chr2R_15_22660001 chr2R_22660001 RAL-894 991 chr2R 22785715 22785754 chr2R 22785811 22785847 7 96 3.5 3.0 3.2 1.7 132 chr2R 22785715 intron CG42260 - chr2R 22785781 intron CG42260 - chr2R 22785847 intron CG42260 - chr2R_7_22785001 chr2R_22785001 RAL-894 992 chr2R 22839633 22839671 chr2R 22839749 22839779 12 113 0.0 4.5 2.2 3.8 146 chr2R 22839633 intergenic CG9825 + chr2R 22839706 intergenic CG9825 + chr2R 22839779 intergenic CG9825 + chr2R_12_22835001 chr2R_22835001 RAL-894 993 chr2R 22953745 22953781 chr2R 22954108 22954118 9 358 3.5 3.5 3.5 2.0 373 chr2R 22953745 3` UTR CR32835 - chr2R 22953932 intergenic CR32835 - chr2R 22954118 intergenic CR32835 - chr2R_9_22950001 chr2R_22950001 RAL-894 994 chr2R 23052638 23052684 chr2R 23052731 23052754 15 92 3.0 5.0 4.0 3.0 116 chr2R 23052638 intergenic not near genes chr2R 23052696 intergenic not near genes chr2R 23052754 intergenic not near genes chr2R_15_23050001 chr2R_23050001 RAL-894 995 chr2R 23184291 23184297 chr2R 23184385 23184402 4 102 0.0 5.0 2.5 1.1 111 chr2R 23184291 intron,intron CG34371 -,CG13539 + chr2R 23184346 intron,intron CG34371 -,CG13539 + chr2R 23184402 intron,intron CG34371 -,CG13539 + chr2R_4_23180001 chr2R_23180001 RAL-894 996 chr2R 11367660 11367660 chr2R 23190007 23190049 4 11822358 5.5 14.5 10.0 0.4 11822389 chr2R 11367660 intron CG13204 + chr2R 17278854 intron mbl + chr2R 23190049 intron CG34371 - chr2R_4_17275001 chr2R_17275001 RAL-894 997 chr2R 23218991 23219023 chr2R 23219249 23219261 4 254 5.5 0.0 2.8 1.1 270 chr2R 23218991 intergenic not near genes chr2R 23219126 intergenic not near genes chr2R 23219261 intergenic not near genes chr2R_4_23215001 chr2R_23215001 RAL-894 998 chr2R 23236961 23236992 chr2R 23237056 23237094 4 94 0.0 2.0 1.0 2.0 133 chr2R 23236961 intergenic not near genes chr2R 23237028 intergenic not near genes chr2R 23237094 intergenic not near genes chr2R_4_23235001 chr2R_23235001 RAL-894 999 chr2R 23402609 23402639 chr2R 23407692 23407735 flea 6 5087 5.0 10.5 7.8 0.7 5126 chr2R 23402609 intergenic CG3520 - chr2R 23405172 intergenic not near genes chr2R 23407735 intergenic not near genes chr2R_6_23405001 chr2R_23405001 RAL-894 1000 chr2R 23553705 23553750 chr2R 23553815 23553851 4 108 3.5 3.0 3.2 1.0 146 chr2R 23553705 intron pita - chr2R 23553778 intron pita - chr2R 23553851 intron pita - chr2R_4_23550001 chr2R_23550001 RAL-894 1001 chr2R 23554911 23554947 chr2R 23555015 23555051 11 104 5.0 5.5 5.2 1.8 140 chr2R 23554911 intergenic Rrp4 -,pita - chr2R 23554981 intergenic Rrp4 -,pita - chr2R 23555051 3` UTR Rrp4 - chr2R_11_23550001 chr2R_23550001 RAL-894 1002 chr2R 23607014 23607192 chr2R 23607116 23607305 14 102 1.5 2.0 1.8 5.0 291 chr2R 23607014 intron CG17664 - chr2R 23607160 intron CG17664 - chr2R 23607305 intron CG17664 - chr2R_14_23605001 chr2R_23605001 RAL-894 1003 chr2R 23887590 23887607 chr2R 23887661 23887690 4 82 9.5 5.0 7.2 0.5 100 chr2R 23887590 intron CG5597 + chr2R 23887640 intron CG5597 + chr2R 23887690 intron CG5597 + chr2R_4_23885001 chr2R_23885001 RAL-894 1004 chr2R 23914281 23914326 chr2R 23921923 23921934 412 5 7631 4.5 5.0 4.8 0.9 7653 chr2R 23914281 exon kcc + chr2R 23918108 intron kcc + chr2R 23921934 intron kcc + chr2R_5_23915001 chr2R_23915001 RAL-894 1005 chr2R 23986502 23986546 chr2R 23986602 23986640 11 97 1.5 5.0 3.2 2.6 138 chr2R 23986502 intron Phm - chr2R 23986571 intron Phm - chr2R 23986640 intron,5` UTR Phm -,CG30178 + chr2R_11_23985001 chr2R_23985001 RAL-894 1006 chr2R 24031362 24031372 chr2R 24031466 24031471 7 103 15.0 5.0 10.0 0.6 109 chr2R 24031362 5` UTR CG30172 - chr2R 24031416 5` UTR CG30172 - chr2R 24031471 intergenic CG30172 -,Chi - chr2R_7_24030001 chr2R_24030001 RAL-894 1007 chr2R 24031376 24031412 chr2R 24031464 24031505 9 98 4.0 4.0 4.0 1.8 129 chr2R 24031376 5` UTR CG30172 - chr2R 24031440 intergenic CG30172 -,Chi - chr2R 24031505 intergenic Chi -,CG30172 - chr2R_9_24030001 chr2R_24030001 RAL-894 1008 chr2R 24081582 24081610 chr2R 24083100 24083142 6 1523 10.5 11.0 10.8 0.5 1560 chr2R 24081582 intergenic CG13564 +,CG16786 + chr2R 24082362 intron CG16786 + chr2R 24083142 intron CG16786 + chr2R_6_24080001 chr2R_24080001 RAL-894 1009 chr2R 24177214 24177266 chr2R 24184719 24184750 412 20 7502 7.5 3.0 5.2 3.2 7536 chr2R 24177214 3` UTR Nop60B + chr2R 24180982 intron Nop60B + chr2R 24184750 3` UTR Nop60B + chr2R_20_24180001 chr2R_24180001 RAL-894 1010 chr2R 24313370 24313404 chr2R 24313468 24313507 10 98 1.0 4.0 2.5 2.9 137 chr2R 24313370 intergenic betaTub60D + chr2R 24313438 intergenic betaTub60D + chr2R 24313507 intergenic betaTub60D + chr2R_10_24310001 chr2R_24310001 RAL-894 1011 chr2R 24353411 24353430 chr2R 24361793 24361812 roo 6 8377 6.5 2.5 4.5 1.1 8401 chr2R 24353411 intron,intron bs +,CR44811 - chr2R 24357612 intron,intron bs +,CR44811 - chr2R 24361812 intron,intron bs +,CR44811 - chr2R_6_24355001 chr2R_24355001 RAL-894 1012 chr2R 24353438 24353451 chr2R 24361788 24361798 roo 4 8364 3.5 2.5 3.0 1.0 8360 chr2R 24353438 intron,intron bs +,CR44811 - chr2R 24357618 intron,intron bs +,CR44811 - chr2R 24361798 intron,intron bs +,CR44811 - chr2R_4_24355001 chr2R_24355001 RAL-894 1013 chr2R 24430794 24430839 chr2R 24430892 24430940 13 101 3.0 2.0 2.5 3.7 146 chr2R 24430794 intergenic CG15873 - chr2R 24430867 intergenic CG15873 -,Pgam5-2 - chr2R 24430940 intergenic CG15873 -,Pgam5-2 - chr2R_13_24430001 chr2R_24430001 RAL-894 1014 chr2R 24513821 24513843 chr2R 24513908 24513918 8 92 1.5 4.0 2.8 2.1 97 chr2R 24513821 intron Letm1 - chr2R 24513870 intron Letm1 - chr2R 24513918 intron Letm1 - chr2R_8_24510001 chr2R_24510001 RAL-894 1015 chr2R 24584325 24584371 chr2R 24584426 24584438 8 96 2.0 0.5 1.2 3.6 113 chr2R 24584325 intron pio + chr2R 24584382 intron pio + chr2R 24584438 intron pio + chr2R_8_24580001 chr2R_24580001 RAL-894 1016 chr2R 24727874 24727916 chr2R 24735401 24735439 mdg1 6 7518 0.0 2.0 1.0 3.0 7565 chr2R 24727874 intron Mid1 - chr2R 24731656 intron Mid1 - chr2R 24735439 intron Mid1 - chr2R_6_24730001 chr2R_24730001 RAL-894 1017 chr2R 24884033 24884072 chr2R 24884135 24884174 9 100 3.0 2.0 2.5 2.6 141 chr2R 24884033 intron NKAIN + chr2R 24884104 intron NKAIN + chr2R 24884174 intron NKAIN + chr2R_9_24880001 chr2R_24880001 RAL-894 1018 chr2R 25014525 25014561 chr2R 25014621 25014627 4 78 3.0 6.5 4.8 0.7 102 chr2R 25014525 intron uzip + chr2R 25014576 intron uzip + chr2R 25014627 intron uzip + chr2R_4_25010001 chr2R_25010001 RAL-894 1019 chr2R 25018320 25018341 chr2R 25018441 25018462 4 118 7.5 2.5 5.0 0.7 142 chr2R 25018320 intron uzip + chr2R 25018391 intron uzip + chr2R 25018462 intron uzip + chr2R_4_25015001 chr2R_25015001 RAL-894 1020 chr2R 25018353 25018370 chr2R 25018440 25018491 10 107 2.5 2.0 2.2 3.1 138 chr2R 25018353 intron uzip + chr2R 25018422 intron uzip + chr2R 25018491 intron uzip + chr2R_10_25015001 chr2R_25015001 RAL-894 1021 chr2R 25022622 25022673 chr2R 25022726 25022739 15 98 3.5 5.0 4.2 2.9 117 chr2R 25022622 intron uzip + chr2R 25022680 intron uzip + chr2R 25022739 intron uzip + chr2R_15_25020001 chr2R_25020001 RAL-894 1022 chr2R 25101254 25101307 chr2R 25101376 25101405 9 111 4.0 1.5 2.8 2.4 151 chr2R 25101254 intron lov - chr2R 25101330 intron lov - chr2R 25101405 intron lov - chr2R_9_25100001 chr2R_25100001 RAL-894 1023 chr2R 25141635 25141679 chr2R 25159344 25159381 roo 15 17707 4.0 5.5 4.8 2.6 17746 chr2R 25141635 intergenic not near genes chr2R 25150508 intergenic not near genes chr2R 25159381 intergenic not near genes chr2R_15_25150001 chr2R_25150001 RAL-894 1024 chr2R 25234754 25234797 chr2R 25234844 25234893 18 92 2.0 5.0 3.5 4.0 139 chr2R 25234754 intron CG9380 - chr2R 25234824 intron CG9380 - chr2R 25234893 intron CG9380 - chr2R_18_25230001 chr2R_25230001 RAL-894 1025 chr3L 33164 33188 chr3L 33382 33406 7 217 1.5 2.5 2.0 2.3 242 chr3L 33164 intergenic not near genes chr3L 33285 intergenic not near genes chr3L 33406 intergenic not near genes chr3L_7_30001 chr3L_30001 RAL-894 1026 chr3L 33192 33464 chr3L 33378 33573 5 130 2.0 2.5 2.2 1.6 381 chr3L 33192 intergenic not near genes chr3L 33382 intergenic not near genes chr3L 33573 intergenic not near genes chr3L_5_30001 chr3L_30001 RAL-894 1027 chr3L 36408 36450 chr3L 36714 36739 6 303 0.0 2.0 1.0 3.0 331 chr3L 36408 intergenic not near genes chr3L 36574 intergenic not near genes chr3L 36739 intergenic not near genes chr3L_6_35001 chr3L_35001 RAL-894 1028 chr3L 46325 46356 chr3L 46782 46817 8 464 6.0 5.5 5.8 1.2 492 chr3L 46325 intergenic not near genes chr3L 46571 intergenic not near genes chr3L 46817 intergenic not near genes chr3L_8_45001 chr3L_45001 RAL-894 1029 chr3L 46896 46946 chr3L 47076 47126 10 179 4.5 4.0 4.2 1.9 230 chr3L 46896 intergenic not near genes chr3L 47011 intergenic not near genes chr3L 47126 intergenic not near genes chr3L_10_45001 chr3L_45001 RAL-894 1030 chr3L 68972 69002 chr3L 69074 69106 6 101 2.5 3.0 2.8 1.6 134 chr3L 68972 3` UTR Lsp1gamma + chr3L 69039 intergenic Lsp1gamma +,CR44510 + chr3L 69106 intergenic CR44510 +,Lsp1gamma + chr3L_6_65001 chr3L_65001 RAL-894 1031 chr3L 71918 71961 chr3L 72016 72023 12 95 3.0 6.5 4.8 2.1 105 chr3L 71918 intergenic CR43988 - chr3L 71970 intergenic CR43988 - chr3L 72023 intergenic CR43988 - chr3L_12_70001 chr3L_70001 RAL-894 1032 chr3L 107217 107266 chr3L 107325 107373 15 108 5.5 8.0 6.8 1.9 156 chr3L 107217 intergenic not near genes chr3L 107295 intergenic not near genes chr3L 107373 intergenic not near genes chr3L_15_105001 chr3L_105001 RAL-894 1033 chr3L 110202 110206 chr3L 119389 119393 roo 5 9187 15.0 7.5 11.2 0.4 9191 chr3L 110202 intergenic not near genes chr3L 114798 intergenic not near genes chr3L 119393 intergenic not near genes chr3L_5_110001 chr3L_110001 RAL-894 1034 chr3L 110209 110243 chr3L 119379 119399 roo 13 9179 8.0 5.0 6.5 1.7 9190 chr3L 110209 intergenic not near genes chr3L 114804 intergenic not near genes chr3L 119399 intergenic not near genes chr3L_13_110001 chr3L_110001 RAL-894 1035 chr3L 180483 180515 chr3L 180746 180763 8 261 5.0 5.5 5.2 1.3 280 chr3L 180483 intron CG13875 + chr3L 180623 intron CG13875 + chr3L 180763 5` UTR CG13875 + chr3L_8_180001 chr3L_180001 RAL-894 1036 chr3L 402677 402718 chr3L 409740 409791 297 12 7067 1.5 5.5 3.5 2.7 7114 chr3L 402677 intergenic not near genes chr3L 406234 intergenic not near genes chr3L 409791 intergenic not near genes chr3L_12_405001 chr3L_405001 RAL-894 1037 chr3L 416114 416165 chr3L 416222 416248 12 99 1.0 4.5 2.8 3.2 134 chr3L 416114 intergenic not near genes chr3L 416181 intergenic not near genes chr3L 416248 intergenic not near genes chr3L_12_415001 chr3L_415001 RAL-894 1038 chr3L 514920 514964 chr3L 515017 515066 10 91 3.0 4.0 3.5 2.2 146 chr3L 514920 intron klar - chr3L 514993 intron klar - chr3L 515066 intron klar - chr3L_10_510001 chr3L_510001 RAL-894 1039 chr3L 524753 524766 chr3L 524855 524868 6 102 0.0 7.5 3.8 1.2 115 chr3L 524753 intron klar - chr3L 524810 intron klar - chr3L 524868 intron klar - chr3L_6_520001 chr3L_520001 RAL-894 1040 chr3L 563951 564003 chr3L 564149 564171 13 187 1.0 5.5 3.2 3.1 220 chr3L 563951 intron hipk + chr3L 564061 intron hipk + chr3L 564171 intron hipk + chr3L_13_560001 chr3L_560001 RAL-894 1041 chr3L 592945 592961 chr3L 593041 593057 7 96 5.5 5.0 5.2 1.1 112 chr3L 592945 intergenic MED14 + chr3L 593001 intergenic MED14 + chr3L 593057 intergenic MED14 + chr3L_7_590001 chr3L_590001 RAL-894 1042 chr3L 603035 603053 chr3L 603138 603156 8 102 2.5 0.0 1.2 3.6 121 chr3L 603035 intron CG13893 - chr3L 603096 intron CG13893 - chr3L 603156 intron CG13893 - chr3L_8_600001 chr3L_600001 RAL-894 1043 chr3L 642477 642499 chr3L 642557 642572 5 86 4.0 3.5 3.8 1.0 95 chr3L 642477 5` UTR CR43334 + chr3L 642524 5` UTR CR43334 + chr3L 642572 5` UTR CR43334 + chr3L_5_640001 chr3L_640001 RAL-894 1044 chr3L 665846 665886 chr3L 665949 665989 5 103 3.5 2.0 2.8 1.3 143 chr3L 665846 intergenic not near genes chr3L 665918 intergenic not near genes chr3L 665989 intergenic not near genes chr3L_5_665001 chr3L_665001 RAL-894 1045 chr3L 705885 705929 chr3L 706001 706044 17 114 3.5 3.0 3.2 4.0 159 chr3L 705885 intergenic CG13895 -,CR44514 + chr3L 705964 3` UTR CG13895 - chr3L 706044 3` UTR CG13895 - chr3L_17_705001 chr3L_705001 RAL-894 1046 chr3L 789892 789905 chr3L 790397 790410 roo 8 505 3.5 1.0 2.2 2.5 518 chr3L 789892 intergenic not near genes chr3L 790151 intergenic not near genes chr3L 790410 intergenic not near genes chr3L_8_790001 chr3L_790001 RAL-894 1047 chr3L 925166 925178 chr3L 932612 932624 mdg1 6 7446 5.0 4.5 4.8 1.0 7458 chr3L 925166 intron Glut1 + chr3L 928895 intron Glut1 + chr3L 932624 intron Glut1 + chr3L_6_925001 chr3L_925001 RAL-894 1048 chr3L 925184 925184 chr3L 932608 932620 mdg1 4 7430 5.5 4.0 4.8 0.7 7436 chr3L 925184 intron Glut1 + chr3L 928902 intron Glut1 + chr3L 932620 intron Glut1 + chr3L_4_925001 chr3L_925001 RAL-894 1049 chr3L 925188 925205 chr3L 932602 932651 mdg1 4 7438 5.0 4.0 4.5 0.7 7463 chr3L 925188 intron Glut1 + chr3L 928920 intron Glut1 + chr3L 932651 intron Glut1 + chr3L_4_925001 chr3L_925001 RAL-894 1050 chr3L 933890 933935 chr3L 934014 934038 10 118 4.0 3.0 3.5 2.2 148 chr3L 933890 intron Glut1 + chr3L 933964 intron Glut1 + chr3L 934038 intron Glut1 + chr3L_10_930001 chr3L_930001 RAL-894 1051 chr3L 939774 939798 chr3L 940893 940929 jockey 6 1134 3.0 3.0 3.0 1.5 1155 chr3L 939774 intron Glut1 + chr3L 940352 intron Glut1 + chr3L 940929 intron Glut1 + chr3L_6_940001 chr3L_940001 RAL-894 1052 chr3L 958294 958348 chr3L 958398 958452 15 102 2.0 3.0 2.5 4.3 158 chr3L 958294 intron Glut1 + chr3L 958373 intron Glut1 + chr3L 958452 intron Glut1 + chr3L_15_955001 chr3L_955001 RAL-894 1053 chr3L 1015130 1015167 chr3L 1015226 1015265 4 88 0.0 1.5 0.8 2.2 135 chr3L 1015130 intron trio - chr3L 1015198 intron trio - chr3L 1015265 intron trio - chr3L_4_1015001 chr3L_1015001 RAL-894 1054 chr3L 1021866 1021870 chr3L 1021979 1021983 4 113 1.5 0.5 1.0 2.0 117 chr3L 1021866 intron trio - chr3L 1021924 intron trio - chr3L 1021983 intron trio - chr3L_4_1020001 chr3L_1020001 RAL-894 1055 chr3L 1028793 1028842 chr3L 1028899 1028948 16 105 4.5 2.5 3.5 3.6 155 chr3L 1028793 intron trio - chr3L 1028870 intron trio - chr3L 1028948 intron trio - chr3L_16_1025001 chr3L_1025001 RAL-894 1056 chr3L 1109620 1109666 chr3L 1109721 1109774 14 99 1.5 1.0 1.2 6.4 154 chr3L 1109620 intergenic not near genes chr3L 1109697 intergenic not near genes chr3L 1109774 intergenic not near genes chr3L_14_1105001 chr3L_1105001 RAL-894 1057 chr3L 1154122 1154124 chr3L 1163287 1163294 roo 4 9168 6.5 3.5 5.0 0.7 9172 chr3L 1154122 intron bab2 - chr3L 1158708 intron bab2 - chr3L 1163294 intron bab2 - chr3L_4_1155001 chr3L_1155001 RAL-894 1058 chr3L 1189611 1189616 chr3L 1189694 1189709 4 91 2.5 6.5 4.5 0.7 98 chr3L 1189611 5` UTR CG13912 + chr3L 1189660 5` UTR CG13912 + chr3L 1189709 5` UTR CG13912 + chr3L_4_1185001 chr3L_1185001 RAL-894 1059 chr3L 1219579 1219624 chr3L 1227331 1227349 412 12 7738 1.0 2.5 1.8 4.3 7770 chr3L 1219579 intron mwh + chr3L 1223464 intron mwh + chr3L 1227349 intron mwh + chr3L_12_1220001 chr3L_1220001 RAL-894 1060 chr3L 1257624 1257655 chr3L 1257724 1257754 12 98 0.5 6.0 3.2 2.9 130 chr3L 1257624 intron CG9134 + chr3L 1257689 intron CG9134 + chr3L 1257754 intron CG9134 + chr3L_12_1255001 chr3L_1255001 RAL-894 1061 chr3L 1374353 1374388 chr3L 1374627 1374662 11 272 1.5 2.0 1.8 3.9 309 chr3L 1374353 intron,intron Ptp61F -,ru + chr3L 1374508 intron,intron Ptp61F -,ru + chr3L 1374662 intron,intron Ptp61F -,ru + chr3L_11_1370001 chr3L_1370001 RAL-894 1062 chr3L 1385154 1385210 chr3L 1385262 1385313 15 104 2.0 3.0 2.5 4.3 159 chr3L 1385154 intron,intron Ptp61F -,ru + chr3L 1385234 intron,intron Ptp61F -,ru + chr3L 1385313 intron,intron Ptp61F -,ru + chr3L_15_1385001 chr3L_1385001 RAL-894 1063 chr3L 1505993 1506023 chr3L 1513596 1513640 17.6 15 7608 5.5 3.5 4.5 2.7 7647 chr3L 1505993 intron,intron Psa +,cue - chr3L 1509816 intron,intron Psa +,cue - chr3L 1513640 intron,intron Psa +,cue - chr3L_15_1505001 chr3L_1505001 RAL-894 1064 chr3L 1570573 1570601 chr3L 1570678 1570706 7 105 1.5 4.0 2.8 1.8 133 chr3L 1570573 intron CG12004 + chr3L 1570640 intron CG12004 + chr3L 1570706 intron CG12004 + chr3L_7_1570001 chr3L_1570001 RAL-894 1065 chr3L 1571464 1571493 chr3L 1571568 1571598 10 105 1.0 11.0 6.0 1.4 134 chr3L 1571464 intron CG12004 + chr3L 1571531 intron CG12004 + chr3L 1571598 intron CG12004 + chr3L_10_1570001 chr3L_1570001 RAL-894 1066 chr3L 1688426 1688437 chr3L 1688532 1688543 4 106 3.0 2.5 2.8 1.1 117 chr3L 1688426 intron CG7991 + chr3L 1688484 intron CG7991 + chr3L 1688543 intron CG7991 + chr3L_4_1685001 chr3L_1685001 RAL-894 1067 chr3L 1740838 1740879 chr3L 1741103 1741107 pogo 11 251 8.5 9.0 8.8 1.1 269 chr3L 1740838 intron Gk + chr3L 1740972 intron Gk + chr3L 1741107 intron Gk + chr3L_11_1740001 chr3L_1740001 RAL-894 1068 chr3L 1805684 1805704 chr3L 1805878 1805885 8 192 4.5 1.5 3.0 2.0 201 chr3L 1805684 exon CG42676 + chr3L 1805784 intron CG42676 + chr3L 1805885 intron CG42676 + chr3L_8_1805001 chr3L_1805001 RAL-894 1069 chr3L 1809986 1810031 chr3L 1810197 1810241 7 209 1.5 4.0 2.8 1.8 255 chr3L 1809986 intergenic not near genes chr3L 1810114 intergenic GV1 + chr3L 1810241 intergenic GV1 + chr3L_7_1810001 chr3L_1810001 RAL-894 1070 chr3L 1853036 1853047 chr3L 1853140 1853151 6 103 6.5 5.5 6.0 0.9 115 chr3L 1853036 intron CG13936 - chr3L 1853094 intron CG13936 - chr3L 1853151 intron CG13936 - chr3L_6_1850001 chr3L_1850001 RAL-894 1071 chr3L 1991099 1991150 chr3L 1991198 1991236 13 92 2.5 0.5 1.5 5.2 137 chr3L 1991099 intergenic not near genes chr3L 1991168 intergenic not near genes chr3L 1991236 intergenic not near genes chr3L_13_1990001 chr3L_1990001 RAL-894 1072 chr3L 2016069 2016101 chr3L 2016205 2016213 5 134 4.0 0.0 2.0 1.7 144 chr3L 2016069 intergenic not near genes chr3L 2016141 intergenic not near genes chr3L 2016213 intergenic not near genes chr3L_5_2015001 chr3L_2015001 RAL-894 1073 chr3L 2035247 2035297 chr3L 2035343 2035398 6 95 3.0 0.0 1.5 2.4 151 chr3L 2035247 intergenic not near genes chr3L 2035322 intergenic not near genes chr3L 2035398 intergenic not near genes chr3L_6_2035001 chr3L_2035001 RAL-894 1074 chr3L 2108237 2108284 chr3L 2113461 2113490 copia 11 5219 3.0 3.5 3.2 2.6 5253 chr3L 2108237 intron sls - chr3L 2110864 intron sls - chr3L 2113490 intron sls - chr3L_11_2110001 chr3L_2110001 RAL-894 1075 chr3L 2139191 2139217 chr3L 2139292 2139318 5 100 6.0 4.5 5.2 0.8 127 chr3L 2139191 intron zormin - chr3L 2139254 intron zormin - chr3L 2139318 intron zormin - chr3L_5_2135001 chr3L_2135001 RAL-894 1076 chr3L 2168764 2168804 chr3L 2168875 2168914 16 106 2.0 4.0 3.0 4.0 150 chr3L 2168764 exon CG15879 - chr3L 2168839 intron CG15879 - chr3L 2168914 intron CG15879 - chr3L_16_2165001 chr3L_2165001 RAL-894 1077 chr3L 2199798 2199818 chr3L 2199888 2199914 4 93 0.5 4.0 2.2 1.2 116 chr3L 2199798 intergenic not near genes chr3L 2199856 intergenic not near genes chr3L 2199914 intergenic not near genes chr3L_4_2195001 chr3L_2195001 RAL-894 1078 chr3L 2307985 2308034 chr3L 2308111 2308155 8 122 4.5 2.5 3.5 1.8 170 chr3L 2307985 intergenic not near genes chr3L 2308070 intergenic not near genes chr3L 2308155 intergenic not near genes chr3L_8_2305001 chr3L_2305001 RAL-894 1079 chr3L 2411318 2411344 chr3L 2411417 2411417 5 89 0.5 0.5 0.5 3.3 99 chr3L 2411318 intron CG45186 + chr3L 2411368 intron CG45186 + chr3L 2411417 intron CG45186 + chr3L_5_2410001 chr3L_2410001 RAL-894 1080 chr3L 2447500 2447534 chr3L 2456660 2456703 roo 8 9162 4.5 5.5 5.0 1.3 9203 chr3L 2447500 intron CG45186 + chr3L 2452102 intron CG45186 + chr3L 2456703 intron CG45186 + chr3L_8_2450001 chr3L_2450001 RAL-894 1081 chr3L 2459136 2459157 chr3L 2459317 2459338 5 179 2.5 6.0 4.2 1.0 202 chr3L 2459136 intron CG45186 + chr3L 2459237 intron CG45186 + chr3L 2459338 intron CG45186 + chr3L_5_2455001 chr3L_2455001 RAL-894 1082 chr3L 2467441 2467483 chr3L 2467550 2467600 5 112 5.5 0.0 2.8 1.3 159 chr3L 2467441 intron CG45186 + chr3L 2467520 intron CG45186 + chr3L 2467600 intron CG45186 + chr3L_5_2465001 chr3L_2465001 RAL-894 1083 chr3L 2554040 2554082 chr3L 2554138 2554163 14 95 5.0 1.5 3.2 3.3 123 chr3L 2554040 intron Spn - chr3L 2554102 5` UTR Spn - chr3L 2554163 5` UTR Spn - chr3L_14_2550001 chr3L_2550001 RAL-894 1084 chr3L 2591704 2591742 chr3L 2591811 2591849 19 101 3.5 7.0 5.2 3.1 145 chr3L 2591704 intron dos + chr3L 2591776 intron dos + chr3L 2591849 intron dos + chr3L_19_2590001 chr3L_2590001 RAL-894 1085 chr3L 2657082 2657133 chr3L 2657183 2657226 13 99 2.0 1.0 1.5 5.2 144 chr3L 2657082 3` UTR Fife - chr3L 2657154 3` UTR Fife - chr3L 2657226 3` UTR Fife - chr3L_13_2655001 chr3L_2655001 RAL-894 1086 chr3L 2683934 2683973 chr3L 2684021 2684069 14 94 5.0 2.5 3.8 2.9 135 chr3L 2683934 intron Fife - chr3L 2684002 intron Fife - chr3L 2684069 intron Fife - chr3L_14_2680001 chr3L_2680001 RAL-894 1087 chr3L 2719522 2719553 chr3L 2719644 2719675 5 122 2.5 6.0 4.2 1.0 153 chr3L 2719522 3` UTR Mrtf - chr3L 2719598 3` UTR Mrtf - chr3L 2719675 3` UTR Mrtf - chr3L_5_2715001 chr3L_2715001 RAL-894 1088 chr3L 2725048 2725066 chr3L 2725145 2725162 5 96 4.5 3.0 3.8 1.0 114 chr3L 2725048 intron Mrtf - chr3L 2725105 intron Mrtf - chr3L 2725162 intron Mrtf - chr3L_5_2725001 chr3L_2725001 RAL-894 1089 chr3L 2766726 2766762 chr3L 2766843 2766879 7 117 2.0 6.5 4.2 1.3 153 chr3L 2766726 intergenic Mrtf -,Non2 + chr3L 2766802 intergenic Non2 +,Mrtf - chr3L 2766879 intergenic Non2 +,Mrtf - chr3L_7_2765001 chr3L_2765001 RAL-894 1090 chr3L 2863777 2863808 chr3L 2863877 2863897 8 98 4.5 0.0 2.2 2.5 120 chr3L 2863777 intron CG43444 - chr3L 2863837 intron CG43444 - chr3L 2863897 intron CG43444 - chr3L_8_2860001 chr3L_2860001 RAL-894 1091 chr3L 2927822 2927872 chr3L 2936119 2936167 Tirant 7 8290 1.5 6.0 3.8 1.5 8345 chr3L 2927822 intron Shab + chr3L 2931994 intron Shab + chr3L 2936167 intron Shab + chr3L_7_2930001 chr3L_2930001 RAL-894 1092 chr3L 2966708 2966731 chr3L 2974152 2974175 mdg1 5 7442 5.0 4.5 4.8 0.9 7467 chr3L 2966708 intergenic not near genes chr3L 2970442 intergenic not near genes chr3L 2974175 intergenic not near genes chr3L_5_2970001 chr3L_2970001 RAL-894 1093 chr3L 2987694 2987731 chr3L 2987796 2987808 18 97 1.5 0.0 0.8 10.0 114 chr3L 2987694 intergenic not near genes chr3L 2987751 intergenic not near genes chr3L 2987808 intergenic not near genes chr3L_18_2985001 chr3L_2985001 RAL-894 1094 chr3L 3021468 3021486 chr3L 3021584 3021608 4 121 2.0 1.0 1.5 1.6 140 chr3L 3021468 intergenic not near genes chr3L 3021538 intergenic not near genes chr3L 3021608 intergenic not near genes chr3L_4_3020001 chr3L_3020001 RAL-894 1095 chr3L 3040312 3040329 chr3L 3042115 3042132 S-element 6 1806 6.0 0.0 3.0 1.5 1820 chr3L 3040312 3` UTR CG2162 + chr3L 3041222 intergenic not near genes chr3L 3042132 intergenic Jafrac2 + chr3L_6_3040001 chr3L_3040001 RAL-894 1096 chr3L 3051724 3051750 chr3L 3051986 3052012 pogo 8 260 10.0 1.0 5.5 1.2 288 chr3L 3051724 3` UTR CG32485 + chr3L 3051868 intergenic CG32485 + chr3L 3052012 intergenic CG32485 + chr3L_8_3050001 chr3L_3050001 RAL-894 1097 chr3L 3104845 3104873 chr3L 3104947 3104975 7 97 0.5 1.0 0.8 3.9 130 chr3L 3104845 intron Cht7 - chr3L 3104910 intron Cht7 - chr3L 3104975 intron Cht7 - chr3L_7_3100001 chr3L_3100001 RAL-894 1098 chr3L 3259609 3259630 chr3L 3259723 3259731 5 111 10.0 5.5 7.8 0.6 122 chr3L 3259609 intron ckd + chr3L 3259670 intron ckd + chr3L 3259731 intron ckd + chr3L_5_3255001 chr3L_3255001 RAL-894 1099 chr3L 3259635 3259652 chr3L 3259722 3259730 4 88 5.0 5.0 5.0 0.7 95 chr3L 3259635 intron ckd + chr3L 3259682 intron ckd + chr3L 3259730 intron ckd + chr3L_4_3255001 chr3L_3255001 RAL-894 1100 chr3L 3281461 3281472 chr3L 3281947 3281978 Doc 7 503 1.5 7.0 4.2 1.3 517 chr3L 3281461 intron CG12017 + chr3L 3281720 intron CG12017 + chr3L 3281978 intron CG12017 + chr3L_7_3280001 chr3L_3280001 RAL-894 1101 chr3L 3317511 3317558 chr3L 3317610 3317657 11 97 0.5 3.5 2.0 3.7 146 chr3L 3317511 intergenic Drsl5 + chr3L 3317584 intergenic Drsl5 +,PIG-C - chr3L 3317657 intergenic PIG-C - chr3L_11_3315001 chr3L_3315001 RAL-894 1102 chr3L 3341246 3341297 chr3L 3341346 3341397 13 96 3.0 0.5 1.8 4.6 151 chr3L 3341246 intron kst + chr3L 3341322 intron kst + chr3L 3341397 intron kst + chr3L_13_3340001 chr3L_3340001 RAL-894 1103 chr3L 3436282 3436314 chr3L 3436381 3436413 15 98 3.5 7.5 5.5 2.3 131 chr3L 3436282 intron eIF5B - chr3L 3436348 intron eIF5B - chr3L 3436413 intron eIF5B - chr3L_15_3435001 chr3L_3435001 RAL-894 1104 chr3L 3484365 3484404 chr3L 3484561 3484600 13 192 0.5 3.5 2.0 4.3 235 chr3L 3484365 intron,exon CG42324 +,CG43074 - chr3L 3484482 intron,exon CG42324 +,CG43074 - chr3L 3484600 intron,exon CG42324 +,CG43074 - chr3L_13_3480001 chr3L_3480001 RAL-894 1105 chr3L 3539960 3539988 chr3L 3540049 3540085 7 102 3.0 0.0 1.5 2.8 125 chr3L 3539960 intron Eip63E + chr3L 3540022 intron Eip63E + chr3L 3540085 intron Eip63E + chr3L_7_3540001 chr3L_3540001 RAL-894 1106 chr3L 3573147 3573192 chr3L 3573250 3573295 9 99 6.0 2.0 4.0 1.8 148 chr3L 3573147 intron Eip63E + chr3L 3573221 intron Eip63E + chr3L 3573295 intron Eip63E + chr3L_9_3570001 chr3L_3570001 RAL-894 1107 chr3L 3601293 3601332 chr3L 3606613 3606659 copia 7 5325 4.0 3.5 3.8 1.5 5366 chr3L 3601293 intron Eip63E + chr3L 3603976 intron Eip63E + chr3L 3606659 intron Eip63E + chr3L_7_3600001 chr3L_3600001 RAL-894 1108 chr3L 3709437 3709457 chr3L 3709539 3709554 4 101 2.5 3.0 2.8 1.1 117 chr3L 3709437 intergenic CR45675 + chr3L 3709496 intergenic CR45675 + chr3L 3709554 intergenic not near genes chr3L_4_3705001 chr3L_3705001 RAL-894 1109 chr3L 3720953 3720980 chr3L 3721054 3721082 6 99 5.0 4.5 4.8 1.0 129 chr3L 3720953 intron CG32264 - chr3L 3721018 intron CG32264 - chr3L 3721082 intron CG32264 - chr3L_6_3720001 chr3L_3720001 RAL-894 1110 chr3L 3766730 3766741 chr3L 3766836 3766847 6 106 2.5 3.5 3.0 1.5 117 chr3L 3766730 intron CG32264 - chr3L 3766788 intron CG32264 - chr3L 3766847 intron CG32264 - chr3L_6_3765001 chr3L_3765001 RAL-894 1111 chr3L 3798028 3798054 chr3L 3798128 3798154 5 97 1.5 5.0 3.2 1.2 126 chr3L 3798028 intron CG32264 - chr3L 3798091 intron CG32264 - chr3L 3798154 intron CG32264 - chr3L_5_3795001 chr3L_3795001 RAL-894 1112 chr3L 3815048 3815060 chr3L 3815137 3815161 7 99 6.0 5.0 5.5 1.1 113 chr3L 3815048 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815104 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815161 intron,intron Scsalpha +,CR43932 - chr3L_7_3815001 chr3L_3815001 RAL-894 1113 chr3L 3815062 3815080 chr3L 3815132 3815181 8 90 2.5 4.5 3.5 1.8 119 chr3L 3815062 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815122 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815181 intron,intron Scsalpha +,CR43932 - chr3L_8_3815001 chr3L_3815001 RAL-894 1114 chr3L 3833729 3833769 chr3L 3833979 3834030 pogo 12 259 0.5 2.5 1.5 4.8 301 chr3L 3833729 intron enc + chr3L 3833880 intron enc + chr3L 3834030 intron enc + chr3L_12_3830001 chr3L_3830001 RAL-894 1115 chr3L 3873893 3873943 chr3L 3873994 3874043 19 95 1.5 2.5 2.0 6.3 150 chr3L 3873893 intergenic not near genes chr3L 3873968 intergenic not near genes chr3L 3874043 intergenic not near genes chr3L_19_3870001 chr3L_3870001 RAL-894 1116 chr3L 3889115 3889145 chr3L 3889218 3889246 10 102 0.5 1.5 1.0 5.0 131 chr3L 3889115 intergenic not near genes chr3L 3889180 intergenic not near genes chr3L 3889246 intergenic not near genes chr3L_10_3885001 chr3L_3885001 RAL-894 1117 chr3L 3912493 3912512 chr3L 3912582 3912589 6 89 0.5 4.5 2.5 1.7 96 chr3L 3912493 intron Eip63F-1 - chr3L 3912541 intron Eip63F-1 - chr3L 3912589 intron Eip63F-1 - chr3L_6_3910001 chr3L_3910001 RAL-894 1118 chr3L 3914176 3914205 chr3L 3914264 3914309 9 97 5.0 2.0 3.5 2.0 133 chr3L 3914176 intron Eip63F-1 - chr3L 3914242 intron Eip63F-1 - chr3L 3914309 intron Eip63F-1 - chr3L_9_3910001 chr3L_3910001 RAL-894 1119 chr3L 4015728 4015766 chr3L 4015816 4015859 6 90 2.5 2.0 2.2 1.9 131 chr3L 4015728 intergenic not near genes chr3L 4015794 intergenic not near genes chr3L 4015859 intergenic not near genes chr3L_6_4015001 chr3L_4015001 RAL-894 1120 chr3L 4099461 4099484 chr3L 4099562 4099584 10 100 2.0 4.5 3.2 2.4 123 chr3L 4099461 intron CG14995 - chr3L 4099522 intron CG14995 - chr3L 4099584 intron CG14995 - chr3L_10_4095001 chr3L_4095001 RAL-894 1121 chr3L 4136453 4136464 chr3L 4142214 4142235 5 5763 28.0 10.0 19.0 0.2 5782 chr3L 4136453 3` UTR Rop - chr3L 4139344 intron Ras64B + chr3L 4142235 intergenic CG32260 +,Akh + chr3L_5_4135001 chr3L_4135001 RAL-894 1122 chr3L 4146808 4146834 chr3L 4146901 4146927 12 99 0.0 3.0 1.5 4.8 119 chr3L 4146808 intergenic not near genes chr3L 4146868 intergenic not near genes chr3L 4146927 intergenic not near genes chr3L_12_4145001 chr3L_4145001 RAL-894 1123 chr3L 4209834 4209852 chr3L 4209918 4209939 8 90 0.0 3.0 1.5 3.2 105 chr3L 4209834 intron CG43367 + chr3L 4209886 intron CG43367 + chr3L 4209939 intron CG43367 + chr3L_8_4205001 chr3L_4205001 RAL-894 1124 chr3L 4328736 4328764 chr3L 4336239 4336247 412 10 7509 2.5 3.5 3.0 2.5 7511 chr3L 4328736 intron Cip4 - chr3L 4332492 intron Cip4 - chr3L 4336247 intron Cip4 - chr3L_10_4330001 chr3L_4330001 RAL-894 1125 chr3L 4344873 4345064 chr3L 4345000 4345138 8 97 0.5 0.0 0.2 6.7 265 chr3L 4344873 intron Cip4 - chr3L 4345006 intron Cip4 - chr3L 4345138 intron Cip4 - chr3L_8_4345001 chr3L_4345001 RAL-894 1126 chr3L 4382301 4382314 chr3L 4382423 4382426 4 120 8.0 5.5 6.8 0.5 125 chr3L 4382301 intergenic not near genes chr3L 4382364 intergenic not near genes chr3L 4382426 intergenic not near genes chr3L_4_4380001 chr3L_4380001 RAL-894 1127 chr3L 4382316 4382327 chr3L 4382418 4382444 5 112 6.5 5.0 5.8 0.7 128 chr3L 4382316 intergenic not near genes chr3L 4382380 intergenic not near genes chr3L 4382444 intergenic not near genes chr3L_5_4380001 chr3L_4380001 RAL-894 1128 chr3L 4519414 4519447 chr3L 4519500 4519534 10 90 4.0 0.5 2.2 3.1 120 chr3L 4519414 intron Tie - chr3L 4519474 intron Tie - chr3L 4519534 intron Tie - chr3L_10_4515001 chr3L_4515001 RAL-894 1129 chr3L 4607248 4607292 chr3L 4607358 4607368 5 101 1.0 3.0 2.0 1.7 120 chr3L 4607248 intron Src64B - chr3L 4607308 intron Src64B - chr3L 4607368 intron Src64B - chr3L_5_4605001 chr3L_4605001 RAL-894 1130 chr3L 4901120 4901159 chr3L 4907330 4907369 diver 7 6207 1.0 5.0 3.0 1.8 6249 chr3L 4901120 intergenic CG13704 + chr3L 4904244 intergenic not near genes chr3L 4907369 intergenic not near genes chr3L_7_4900001 chr3L_4900001 RAL-894 1131 chr3L 5034137 5034185 chr3L 5043309 5043328 roo 12 9166 4.5 0.5 2.5 3.4 9191 chr3L 5034137 intron Con - chr3L 5038732 intron Con - chr3L 5043328 intron Con - chr3L_12_5035001 chr3L_5035001 RAL-894 1132 chr3L 5045451 5045472 chr3L 5050239 5050263 Doc 15 4792 7.0 3.0 5.0 2.5 4812 chr3L 5045451 intron Con - chr3L 5047857 intron Con - chr3L 5050263 intron Con - chr3L_15_5045001 chr3L_5045001 RAL-894 1133 chr3L 5053216 5053252 chr3L 5053691 5053733 4 480 0.5 2.0 1.2 1.8 517 chr3L 5053216 intron Con - chr3L 5053474 intron Con - chr3L 5053733 intron Con - chr3L_4_5050001 chr3L_5050001 RAL-894 1134 chr3L 5066282 5066326 chr3L 5066401 5066445 8 118 1.0 1.0 1.0 4.0 163 chr3L 5066282 intron Con - chr3L 5066364 intron Con - chr3L 5066445 intron Con - chr3L_8_5065001 chr3L_5065001 RAL-894 1135 chr3L 5101190 5101195 chr3L 5101289 5101294 5 99 5.0 4.0 4.5 0.9 104 chr3L 5101190 intergenic not near genes chr3L 5101242 intergenic not near genes chr3L 5101294 intergenic not near genes chr3L_5_5100001 chr3L_5100001 RAL-894 1136 chr3L 5101205 5101231 chr3L 5101285 5101314 8 91 1.0 3.5 2.2 2.5 109 chr3L 5101205 intergenic not near genes chr3L 5101260 intergenic not near genes chr3L 5101314 intergenic not near genes chr3L_8_5100001 chr3L_5100001 RAL-894 1137 chr3L 5104467 5104511 chr3L 5124621 5124663 17 20153 3.5 2.5 3.0 4.2 20196 chr3L 5104467 intergenic not near genes chr3L 5114565 intergenic not near genes chr3L 5124663 intergenic not near genes chr3L_17_5110001 chr3L_5110001 RAL-894 1138 chr3L 5130909 5130952 chr3L 5131032 5131072 8 119 5.5 2.0 3.8 1.7 163 chr3L 5130909 intergenic not near genes chr3L 5130990 intergenic not near genes chr3L 5131072 intergenic CG15212 + chr3L_8_5130001 chr3L_5130001 RAL-894 1139 chr3L 5164624 5164667 chr3L 5164720 5164763 9 95 4.0 5.0 4.5 1.6 139 chr3L 5164624 intron shep - chr3L 5164694 intron shep - chr3L 5164763 intron shep - chr3L_9_5160001 chr3L_5160001 RAL-894 1140 chr3L 5188778 5188826 chr3L 5189549 5189575 12 763 3.5 4.0 3.8 2.5 797 chr3L 5188778 intron shep - chr3L 5189176 intron shep - chr3L 5189575 intron shep - chr3L_12_5185001 chr3L_5185001 RAL-894 1141 chr3L 5203084 5203114 chr3L 5203209 5203239 14 125 2.5 2.0 2.2 4.4 155 chr3L 5203084 intron shep - chr3L 5203162 intron shep - chr3L 5203239 intron shep - chr3L_14_5200001 chr3L_5200001 RAL-894 1142 chr3L 5248979 5249006 chr3L 5249083 5249110 11 103 1.5 6.5 4.0 2.2 131 chr3L 5248979 intron shep - chr3L 5249044 intron shep - chr3L 5249110 intron shep - chr3L_11_5245001 chr3L_5245001 RAL-894 1143 chr3L 5261147 5261182 chr3L 5261246 5261281 10 96 3.5 2.5 3.0 2.5 134 chr3L 5261147 intron shep - chr3L 5261214 intron shep - chr3L 5261281 intron shep - chr3L_10_5260001 chr3L_5260001 RAL-894 1144 chr3L 5299152 5299167 chr3L 5306598 5306612 Quasimodo 5 7446 1.0 0.0 0.5 3.3 7460 chr3L 5299152 intergenic not near genes chr3L 5302882 intergenic not near genes chr3L 5306612 intergenic not near genes chr3L_5_5300001 chr3L_5300001 RAL-894 1145 chr3L 5349364 5349409 chr3L 5349606 5349651 10 244 36.0 35.0 35.5 0.3 287 chr3L 5349364 intron lama - chr3L 5349508 intron lama - chr3L 5349651 intron lama - chr3L_10_5345001 chr3L_5345001 RAL-894 1146 chr3L 5393453 5393464 chr3L 5393635 5393646 4 182 0.5 0.0 0.2 3.3 193 chr3L 5393453 intergenic not near genes chr3L 5393550 intergenic not near genes chr3L 5393646 intergenic not near genes chr3L_4_5390001 chr3L_5390001 RAL-894 1147 chr3L 5427356 5427380 chr3L 5427981 5428005 6 624 2.0 6.0 4.0 1.2 649 chr3L 5427356 intron CG34391 + chr3L 5427680 intron CG34391 + chr3L 5428005 intron CG34391 + chr3L_6_5425001 chr3L_5425001 RAL-894 1148 chr3L 5482952 5483093 chr3L 5483150 5483192 12 116 1.0 0.0 0.5 8.0 240 chr3L 5482952 exon CG4835 + chr3L 5483072 exon CG4835 + chr3L 5483192 exon CG4835 + chr3L_12_5480001 chr3L_5480001 RAL-894 1149 chr3L 5521477 5521525 chr3L 5521585 5521595 12 104 4.0 4.0 4.0 2.4 118 chr3L 5521477 intron Lkr - chr3L 5521536 intron Lkr - chr3L 5521595 intron Lkr - chr3L_12_5520001 chr3L_5520001 RAL-894 1150 chr3L 5537710 5537718 chr3L 5538064 5538070 jockey 4 353 7.5 3.0 5.2 0.6 360 chr3L 5537710 intergenic not near genes chr3L 5537890 intergenic not near genes chr3L 5538070 intergenic CG10625 - chr3L_4_5535001 chr3L_5535001 RAL-894 1151 chr3L 5537721 5537751 chr3L 5538062 5538112 jockey 8 350 3.0 2.5 2.8 2.1 391 chr3L 5537721 intergenic not near genes chr3L 5537916 intergenic CG10625 - chr3L 5538112 intergenic CG10625 - chr3L_8_5535001 chr3L_5535001 RAL-894 1152 chr3L 5561644 5561698 chr3L 5561746 5561800 5 102 1.0 2.0 1.5 2.0 156 chr3L 5561644 intergenic sinu -,Sucb - chr3L 5561722 3` UTR Sucb - chr3L 5561800 3` UTR Sucb - chr3L_5_5560001 chr3L_5560001 RAL-894 1153 chr3L 5597811 5597829 chr3L 5597911 5597929 9 100 1.5 0.0 0.8 5.0 118 chr3L 5597811 intergenic CG5150 + chr3L 5597870 intergenic CG5150 + chr3L 5597929 intergenic not near genes chr3L_9_5595001 chr3L_5595001 RAL-894 1154 chr3L 5613476 5613498 chr3L 5613623 5613643 4 146 4.0 2.0 3.0 1.0 167 chr3L 5613476 intergenic not near genes chr3L 5613560 intergenic not near genes chr3L 5613643 intergenic not near genes chr3L_4_5610001 chr3L_5610001 RAL-894 1155 chr3L 5726888 5726893 chr3L 5726995 5727012 5 120 1.5 5.0 3.2 1.2 124 chr3L 5726888 intron sif + chr3L 5726950 intron sif + chr3L 5727012 intron sif + chr3L_5_5725001 chr3L_5725001 RAL-894 1156 chr3L 5910017 5910064 chr3L 5910278 5910325 pogo 15 258 7.5 7.0 7.2 1.8 308 chr3L 5910017 intron CG13288 + chr3L 5910171 intron CG13288 + chr3L 5910325 intron CG13288 + chr3L_15_5910001 chr3L_5910001 RAL-894 1157 chr3L 5926309 5926341 chr3L 5926511 5926521 BS 5 197 6.0 5.0 5.5 0.8 212 chr3L 5926309 intron Vap-33B + chr3L 5926415 intron Vap-33B + chr3L 5926521 intron Vap-33B + chr3L_5_5925001 chr3L_5925001 RAL-894 1158 chr3L 5940063 5940111 chr3L 5940175 5940216 6 97 2.5 1.5 2.0 2.0 153 chr3L 5940063 intron CG33993 - chr3L 5940140 intron CG33993 - chr3L 5940216 intron CG33993 - chr3L_6_5940001 chr3L_5940001 RAL-894 1159 chr3L 5983843 5983857 chr3L 5983984 5983998 6 140 4.0 0.0 2.0 2.0 155 chr3L 5983843 3` UTR CR45439 - chr3L 5983920 intergenic CR45439 -,CR45440 - chr3L 5983998 intergenic CR45440 -,CR45439 - chr3L_6_5980001 chr3L_5980001 RAL-894 1160 chr3L 6001685 6001712 chr3L 6004397 6004432 jockey 6 2719 0.0 1.5 0.8 3.3 2747 chr3L 6001685 intron PVRAP + chr3L 6003058 intron PVRAP + chr3L 6004432 intron PVRAP + chr3L_6_6000001 chr3L_6000001 RAL-894 1161 chr3L 6028372 6028398 chr3L 6028473 6028487 6 98 4.5 3.0 3.8 1.2 115 chr3L 6028372 intergenic not near genes chr3L 6028430 intergenic not near genes chr3L 6028487 intergenic not near genes chr3L_6_6025001 chr3L_6025001 RAL-894 1162 chr3L 6040346 6040391 chr3L 6042722 6042766 Doc 6 2373 3.5 2.0 2.8 1.6 2420 chr3L 6040346 intergenic Jon65Aiv + chr3L 6041556 intergenic not near genes chr3L 6042766 intergenic not near genes chr3L_6_6040001 chr3L_6040001 RAL-894 1163 chr3L 6142489 6142532 chr3L 6142719 6142763 11 228 1.0 1.0 1.0 5.5 274 chr3L 6142489 intergenic Cpr65Aw - chr3L 6142626 intergenic Cpr65Aw - chr3L 6142763 intergenic Cpr65Aw - chr3L_11_6140001 chr3L_6140001 RAL-894 1164 chr3L 6220897 6220947 chr3L 6230069 6230094 roo 10 9164 7.5 2.5 5.0 1.7 9197 chr3L 6220897 5` UTR pncr008:3L + chr3L 6225496 intergenic not near genes chr3L 6230094 intergenic not near genes chr3L_10_6225001 chr3L_6225001 RAL-894 1165 chr3L 6233309 6233327 chr3L 6233434 6233460 8 131 3.0 8.5 5.8 1.2 151 chr3L 6233309 5` UTR BG642312 - chr3L 6233384 intergenic BG642312 -,CG42714 - chr3L 6233460 intergenic CG42714 -,BG642312 - chr3L_8_6230001 chr3L_6230001 RAL-894 1166 chr3L 6332235 6332271 chr3L 6332341 6332378 4 106 2.5 0.0 1.2 1.8 143 chr3L 6332235 intron CG13300 - chr3L 6332306 intron CG13300 - chr3L 6332378 intron CG13300 - chr3L_4_6330001 chr3L_6330001 RAL-894 1167 chr3L 6334989 6335039 chr3L 6335480 6335530 297 9 488 3.0 4.5 3.8 1.9 541 chr3L 6334989 intron CG13300 - chr3L 6335260 intron CG13300 - chr3L 6335530 intron CG13300 - chr3L_9_6335001 chr3L_6335001 RAL-894 1168 chr3L 6405643 6405688 chr3L 6432126 6432172 roo 12 26481 5.5 6.5 6.0 1.7 26529 chr3L 6405643 intron CG42747 + chr3L 6418908 intron CG42747 + chr3L 6432172 intron CG42747 + chr3L_12_6415001 chr3L_6415001 RAL-894 1169 chr3L 6781107 6781153 chr3L 6783140 6783183 Doc 6 2030 3.0 0.0 1.5 2.4 2076 chr3L 6781107 intergenic not near genes chr3L 6782145 intergenic not near genes chr3L 6783183 intergenic not near genes chr3L_6_6780001 chr3L_6780001 RAL-894 1170 chr3L 6835920 6835924 chr3L 6836018 6836022 4 97 5.0 2.0 3.5 0.9 102 chr3L 6835920 intergenic not near genes chr3L 6835971 intergenic not near genes chr3L 6836022 intergenic not near genes chr3L_4_6835001 chr3L_6835001 RAL-894 1171 chr3L 6855914 6855946 chr3L 6860717 6860728 Doc 5 4794 1.5 0.0 0.8 2.8 4814 chr3L 6855914 intergenic not near genes chr3L 6858321 intergenic not near genes chr3L 6860728 intergenic not near genes chr3L_5_6855001 chr3L_6855001 RAL-894 1172 chr3L 6868701 6868732 chr3L 6868799 6868830 6 98 0.0 3.0 1.5 2.4 129 chr3L 6868701 intergenic not near genes chr3L 6868766 intergenic not near genes chr3L 6868830 intergenic not near genes chr3L_6_6865001 chr3L_6865001 RAL-894 1173 chr3L 6887503 6887528 chr3L 6895015 6895040 roo 7 7512 3.5 4.0 3.8 1.5 7537 chr3L 6887503 intergenic not near genes chr3L 6891272 intergenic not near genes chr3L 6895040 intergenic not near genes chr3L_7_6890001 chr3L_6890001 RAL-894 1174 chr3L 6887529 6887541 chr3L 6895014 6895053 roo 6 7508 2.5 3.5 3.0 1.5 7524 chr3L 6887529 intergenic not near genes chr3L 6891291 intergenic not near genes chr3L 6895053 intergenic not near genes chr3L_6_6890001 chr3L_6890001 RAL-894 1175 chr3L 6934331 6934346 chr3L 6934458 6934460 4 124 4.5 1.5 3.0 1.0 129 chr3L 6934331 exon CG14820 + chr3L 6934396 intron CG14820 + chr3L 6934460 intron CG14820 + chr3L_4_6930001 chr3L_6930001 RAL-894 1176 chr3L 6955774 6955819 chr3L 6955869 6955914 9 97 1.5 2.5 2.0 3.0 140 chr3L 6955774 5` UTR CG10077 - chr3L 6955844 5` UTR CG10077 - chr3L 6955914 intergenic CG10077 -,CG9948 + chr3L_9_6955001 chr3L_6955001 RAL-894 1177 chr3L 6990720 6990738 chr3L 6990819 6990838 4 99 3.5 3.0 3.2 1.0 118 chr3L 6990720 5` UTR bin + chr3L 6990779 5` UTR bin + chr3L 6990838 exon bin + chr3L_4_6990001 chr3L_6990001 RAL-894 1178 chr3L 7013437 7013472 chr3L 7013545 7013545 5 103 1.0 0.0 0.5 3.3 108 chr3L 7013437 intron Mp + chr3L 7013491 intron Mp + chr3L 7013545 intron Mp + chr3L_5_7010001 chr3L_7010001 RAL-894 1179 chr3L 7107198 7107220 chr3L 7107298 7107320 6 100 4.0 5.0 4.5 1.1 122 chr3L 7107198 intron form3 + chr3L 7107259 intron form3 + chr3L 7107320 intron form3 + chr3L_6_7105001 chr3L_7105001 RAL-894 1180 chr3L 7112575 7112609 chr3L 7112679 7112716 8 104 1.0 8.5 4.8 1.4 141 chr3L 7112575 intron form3 + chr3L 7112646 intron form3 + chr3L 7112716 intron form3 + chr3L_8_7110001 chr3L_7110001 RAL-894 1181 chr3L 7129937 7129982 chr3L 7130149 7130183 BS 16 209 6.5 4.0 5.2 2.6 246 chr3L 7129937 intergenic CG15829 + chr3L 7130060 intergenic CG15829 + chr3L 7130183 intergenic not near genes chr3L_16_7130001 chr3L_7130001 RAL-894 1182 chr3L 7187382 7187419 chr3L 7187484 7187521 11 100 0.0 0.0 0.0 11.0 139 chr3L 7187382 intron Dscam2 - chr3L 7187452 intron Dscam2 - chr3L 7187521 intron Dscam2 - chr3L_11_7185001 chr3L_7185001 RAL-894 1183 chr3L 7276191 7276237 chr3L 7276295 7276340 14 103 3.0 2.5 2.8 3.7 149 chr3L 7276191 intron unc-13-4A - chr3L 7276266 intron unc-13-4A - chr3L 7276340 intron unc-13-4A - chr3L_14_7275001 chr3L_7275001 RAL-894 1184 chr3L 7285436 7285475 chr3L 7285533 7285573 4 98 1.5 3.5 2.5 1.1 137 chr3L 7285436 intron unc-13-4A - chr3L 7285504 intron unc-13-4A - chr3L 7285573 intron unc-13-4A - chr3L_4_7285001 chr3L_7285001 RAL-894 1185 chr3L 7377296 7377343 chr3L 7380421 7380442 297 10 3121 6.0 3.0 4.5 1.8 3146 chr3L 7377296 intron SMSr - chr3L 7378869 intron SMSr - chr3L 7380442 intron SMSr - chr3L_10_7375001 chr3L_7375001 RAL-894 1186 chr3L 7418197 7418240 chr3L 7418300 7418343 5 101 0.5 3.0 1.8 1.8 146 chr3L 7418197 intergenic not near genes chr3L 7418270 intergenic not near genes chr3L 7418343 intergenic not near genes chr3L_5_7415001 chr3L_7415001 RAL-894 1187 chr3L 7460355 7460395 chr3L 7460458 7460499 13 104 0.5 3.0 1.8 4.6 144 chr3L 7460355 intergenic not near genes chr3L 7460427 intergenic not near genes chr3L 7460499 intergenic not near genes chr3L_13_7460001 chr3L_7460001 RAL-894 1188 chr3L 7498744 7498782 chr3L 7503541 7503579 F-element 10 4796 7.0 5.0 6.0 1.4 4835 chr3L 7498744 5` UTR CG8539 - chr3L 7501162 intergenic not near genes chr3L 7503579 intergenic not near genes chr3L_10_7500001 chr3L_7500001 RAL-894 1189 chr3L 7505428 7505443 chr3L 7505523 7505540 5 97 1.5 2.5 2.0 1.7 112 chr3L 7505428 intergenic CG7548 - chr3L 7505484 intergenic CG7548 - chr3L 7505540 3` UTR CG7548 - chr3L_5_7505001 chr3L_7505001 RAL-894 1190 chr3L 7508673 7508702 chr3L 7508766 7508792 6 96 4.0 3.0 3.5 1.3 119 chr3L 7508673 intergenic not near genes chr3L 7508732 intergenic not near genes chr3L 7508792 intergenic not near genes chr3L_6_7505001 chr3L_7505001 RAL-894 1191 chr3L 7574195 7574233 chr3L 7574295 7574317 6 95 3.0 1.5 2.2 1.9 122 chr3L 7574195 intergenic not near genes chr3L 7574256 intergenic not near genes chr3L 7574317 intergenic not near genes chr3L_6_7570001 chr3L_7570001 RAL-894 1192 chr3L 7576196 7576243 chr3L 7576304 7576350 17 107 1.0 2.5 1.8 6.1 154 chr3L 7576196 intergenic not near genes chr3L 7576273 intergenic not near genes chr3L 7576350 intergenic not near genes chr3L_17_7575001 chr3L_7575001 RAL-894 1193 chr3L 7591170 7591179 chr3L 7591237 7591238 4 79 2.5 2.5 2.5 1.1 68 chr3L 7591170 intergenic CG7716 - chr3L 7591204 intergenic CG7716 - chr3L 7591238 intergenic CG7716 - chr3L_4_7590001 chr3L_7590001 RAL-894 1194 chr3L 7793698 7793736 chr3L 7800770 7800808 297 11 7069 9.0 8.0 8.5 1.2 7110 chr3L 7793698 intron CG32369 - chr3L 7797253 intron CG32369 - chr3L 7800808 intron CG32369 - chr3L_11_7795001 chr3L_7795001 RAL-894 1195 chr3L 7884446 7884467 chr3L 7884545 7884561 4 98 0.0 0.5 0.2 3.3 115 chr3L 7884446 intron CG32365 + chr3L 7884504 intron CG32365 + chr3L 7884561 intron CG32365 + chr3L_4_7880001 chr3L_7880001 RAL-894 1196 chr3L 7886496 7886543 chr3L 7889034 7889040 Stalker4 9 2532 1.5 4.0 2.8 2.4 2544 chr3L 7886496 intron CG32365 + chr3L 7887768 intron CG32365 + chr3L 7889040 intron CG32365 + chr3L_9_7885001 chr3L_7885001 RAL-894 1197 chr3L 7916842 7916855 chr3L 7926003 7926046 roo 5 9184 4.0 3.5 3.8 1.0 9204 chr3L 7916842 3` UTR syd - chr3L 7921444 intron syd - chr3L 7926046 3` UTR syd - chr3L_5_7920001 chr3L_7920001 RAL-894 1198 chr3L 7985357 7985397 chr3L 7987705 7987738 NOF 7 2344 2.5 7.0 4.8 1.2 2381 chr3L 7985357 intron nmo + chr3L 7986548 intron nmo + chr3L 7987738 intron nmo + chr3L_7_7985001 chr3L_7985001 RAL-894 1199 chr3L 8019707 8019734 chr3L 8024116 8024167 NOF 4 4417 1.5 4.5 3.0 1.0 4460 chr3L 8019707 intron nmo + chr3L 8021937 intron nmo + chr3L 8024167 intron nmo + chr3L_4_8020001 chr3L_8020001 RAL-894 1200 chr3L 8026578 8026627 chr3L 8026676 8026727 10 97 3.5 6.0 4.8 1.7 149 chr3L 8026578 intron nmo + chr3L 8026652 intron nmo + chr3L 8026727 intron nmo + chr3L_10_8025001 chr3L_8025001 RAL-894 1201 chr3L 8076681 8076715 chr3L 8076764 8076805 5 93 4.5 2.0 3.2 1.2 124 chr3L 8076681 intron Ect4 + chr3L 8076743 intron Ect4 + chr3L 8076805 intron Ect4 + chr3L_5_8075001 chr3L_8075001 RAL-894 1202 chr3L 8165965 8165991 chr3L 8166069 8166095 7 103 2.0 4.0 3.0 1.8 130 chr3L 8165965 intergenic CG13675 - chr3L 8166030 intergenic not near genes chr3L 8166095 intergenic not near genes chr3L_7_8165001 chr3L_8165001 RAL-894 1203 chr3L 8295774 8295825 chr3L 8295952 8296002 13 175 4.5 2.5 3.5 2.9 228 chr3L 8295774 intergenic CG7201 - chr3L 8295888 intergenic not near genes chr3L 8296002 intergenic not near genes chr3L_13_8295001 chr3L_8295001 RAL-894 1204 chr3L 8364508 8364535 chr3L 8364613 8364646 10 110 4.0 0.0 2.0 3.3 138 chr3L 8364508 intergenic not near genes chr3L 8364577 intergenic not near genes chr3L 8364646 intergenic not near genes chr3L_10_8360001 chr3L_8360001 RAL-894 1205 chr3L 8497882 8497917 chr3L 8498008 8498043 9 123 0.0 4.0 2.0 3.0 161 chr3L 8497882 intron CG43163 - chr3L 8497962 intron CG43163 - chr3L 8498043 intron CG43163 - chr3L_9_8495001 chr3L_8495001 RAL-894 1206 chr3L 8522131 8522170 chr3L 8522239 8522262 6 105 1.0 2.0 1.5 2.4 131 chr3L 8522131 exon GstO2 - chr3L 8522196 exon GstO2 - chr3L 8522262 exon GstO2 - chr3L_6_8520001 chr3L_8520001 RAL-894 1207 chr3L 8576257 8576281 chr3L 8576371 8576389 7 113 1.5 0.5 1.0 3.5 132 chr3L 8576257 intergenic CG6638 - chr3L 8576323 intergenic CG6638 -,CG43078 + chr3L 8576389 intergenic CG6638 -,CG43078 + chr3L_7_8575001 chr3L_8575001 RAL-894 1208 chr3L 8752396 8752445 chr3L 8752604 8752654 14 202 3.0 7.0 5.0 2.3 258 chr3L 8752396 intergenic not near genes chr3L 8752525 intergenic not near genes chr3L 8752654 intergenic not near genes chr3L_14_8750001 chr3L_8750001 RAL-894 1209 chr3L 8791280 8791309 chr3L 8796698 8796746 I-element 7 5436 1.0 0.0 0.5 4.7 5466 chr3L 8791280 exon Fhos + chr3L 8794013 intron Fhos + chr3L 8796746 intron Fhos + chr3L_7_8790001 chr3L_8790001 RAL-894 1210 chr3L 8827117 8827128 chr3L 8827327 8827358 6 225 0.0 2.5 1.2 2.7 241 chr3L 8827117 intergenic dally + chr3L 8827238 intergenic dally + chr3L 8827358 intergenic dally + chr3L_6_8825001 chr3L_8825001 RAL-894 1211 chr3L 8839720 8839738 chr3L 8839820 8839831 5 96 4.5 0.0 2.2 1.6 111 chr3L 8839720 intron dally + chr3L 8839776 intron dally + chr3L 8839831 intron dally + chr3L_5_8835001 chr3L_8835001 RAL-894 1212 chr3L 8916546 8916562 chr3L 8916651 8916667 7 105 0.5 4.5 2.5 2.0 121 chr3L 8916546 intron Tsp66E + chr3L 8916606 intron Tsp66E + chr3L 8916667 intron Tsp66E + chr3L_7_8915001 chr3L_8915001 RAL-894 1213 chr3L 9009940 9009973 chr3L 9010064 9010097 7 124 2.0 3.0 2.5 2.0 157 chr3L 9009940 intergenic CG5194 - chr3L 9010018 intergenic CG5194 - chr3L 9010097 intergenic CG5194 - chr3L_7_9010001 chr3L_9010001 RAL-894 1214 chr3L 9030416 9030449 chr3L 9030514 9030548 6 99 1.0 1.0 1.0 3.0 132 chr3L 9030416 intergenic not near genes chr3L 9030482 intergenic not near genes chr3L 9030548 intergenic not near genes chr3L_6_9030001 chr3L_9030001 RAL-894 1215 chr3L 9076913 9076954 chr3L 9084485 9084524 412 8 7571 4.0 5.0 4.5 1.5 7611 chr3L 9076913 exon Tequila + chr3L 9080718 intron Tequila + chr3L 9084524 exon Tequila + chr3L_8_9080001 chr3L_9080001 RAL-894 1216 chr3L 9109735 9109777 chr3L 9110355 9110390 16 622 2.5 5.0 3.8 3.3 655 chr3L 9109735 intron bol - chr3L 9110062 intron bol - chr3L 9110390 intron bol - chr3L_16_9110001 chr3L_9110001 RAL-894 1217 chr3L 9164680 9164704 chr3L 9166167 9166186 hobo 4 1482 7.0 1.0 4.0 0.8 1506 chr3L 9164680 intron Rdl - chr3L 9165433 intron Rdl - chr3L 9166186 intron Rdl - chr3L_4_9165001 chr3L_9165001 RAL-894 1218 chr3L 9164705 9164728 chr3L 9166162 9166199 hobo 8 1477 4.5 1.0 2.8 2.1 1494 chr3L 9164705 intron Rdl - chr3L 9165452 intron Rdl - chr3L 9166199 intron Rdl - chr3L_8_9165001 chr3L_9165001 RAL-894 1219 chr3L 9219225 9219258 chr3L 9219917 9219930 jockey 5 681 4.0 2.0 3.0 1.2 705 chr3L 9219225 intergenic not near genes chr3L 9219578 intergenic not near genes chr3L 9219930 intergenic not near genes chr3L_5_9215001 chr3L_9215001 RAL-894 1220 chr3L 9270612 9270644 chr3L 9278383 9278415 roo 6 7769 3.0 2.0 2.5 1.7 7803 chr3L 9270612 intron GluRIB + chr3L 9274514 intron GluRIB + chr3L 9278415 exon GluRIB + chr3L_6_9270001 chr3L_9270001 RAL-894 1221 chr3L 9359583 9359617 chr3L 9359684 9359723 16 110 5.0 6.0 5.5 2.5 140 chr3L 9359583 3` UTR CG32039 + chr3L 9359653 3` UTR CG32039 + chr3L 9359723 3` UTR CG32039 + chr3L_16_9355001 chr3L_9355001 RAL-894 1222 chr3L 9501692 9501733 chr3L 9502193 9502239 roo 10 504 2.0 4.5 3.2 2.4 547 chr3L 9501692 intron path - chr3L 9501966 intron path - chr3L 9502239 intron path - chr3L_10_9500001 chr3L_9500001 RAL-894 1223 chr3L 9502596 9502644 chr3L 9502696 9502744 12 98 1.5 4.0 2.8 3.2 148 chr3L 9502596 intron path - chr3L 9502670 intron path - chr3L 9502744 intron path - chr3L_12_9500001 chr3L_9500001 RAL-894 1224 chr3L 9510907 9510946 chr3L 9511007 9511037 8 100 0.0 4.0 2.0 2.7 130 chr3L 9510907 intron RpS9 - chr3L 9510972 intron RpS9 - chr3L 9511037 intron RpS9 - chr3L_8_9510001 chr3L_9510001 RAL-894 1225 chr3L 9571900 9571935 chr3L 9572263 9572270 jockey 7 361 2.0 6.0 4.0 1.4 370 chr3L 9571900 intron CG42673 + chr3L 9572085 intron CG42673 + chr3L 9572270 intron CG42673 + chr3L_7_9570001 chr3L_9570001 RAL-894 1226 chr3L 9572276 9572324 chr3L 9572375 9572412 7 97 5.5 2.0 3.8 1.5 136 chr3L 9572276 intron CG42673 + chr3L 9572344 intron CG42673 + chr3L 9572412 intron CG42673 + chr3L_7_9570001 chr3L_9570001 RAL-894 1227 chr3L 9575892 9575946 chr3L 9580990 9581017 jockey 6 5081 5.0 4.5 4.8 1.0 5125 chr3L 9575892 intron CG42673 + chr3L 9578454 intron CG42673 + chr3L 9581017 intron CG42673 + chr3L_6_9575001 chr3L_9575001 RAL-894 1228 chr3L 9629720 9629766 chr3L 9629816 9629862 7 95 4.0 6.0 5.0 1.2 142 chr3L 9629720 intron CG8336 + chr3L 9629791 intron CG8336 + chr3L 9629862 intron CG8336 + chr3L_7_9625001 chr3L_9625001 RAL-894 1229 chr3L 9817629 9817656 chr3L 9817729 9817756 11 98 1.0 8.0 4.5 2.0 127 chr3L 9817629 intron CG43897 + chr3L 9817692 intron CG43897 + chr3L 9817756 intron CG43897 + chr3L_11_9815001 chr3L_9815001 RAL-894 1230 chr3L 9831686 9831720 chr3L 9831787 9831821 12 100 2.5 5.0 3.8 2.5 135 chr3L 9831686 intron CG43897 + chr3L 9831754 intron CG43897 + chr3L 9831821 intron CG43897 + chr3L_12_9830001 chr3L_9830001 RAL-894 1231 chr3L 9835420 9835456 chr3L 9835530 9835566 8 110 1.0 4.5 2.8 2.1 146 chr3L 9835420 exon I-2 - chr3L 9835493 intron I-2 - chr3L 9835566 intron I-2 - chr3L_8_9835001 chr3L_9835001 RAL-894 1232 chr3L 9929659 9929700 chr3L 9938456 9938492 roo 10 8799 1.0 3.0 2.0 3.3 8833 chr3L 9929659 intron CG34356 + chr3L 9934076 intron CG34356 + chr3L 9938492 intron CG34356 + chr3L_10_9930001 chr3L_9930001 RAL-894 1233 chr3L 9951187 9951231 chr3L 9951283 9951332 12 102 4.5 3.0 3.8 2.5 145 chr3L 9951187 intron CG34356 + chr3L 9951260 intron CG34356 + chr3L 9951332 intron CG34356 + chr3L_12_9950001 chr3L_9950001 RAL-894 1234 chr3L 9992691 9992715 chr3L 9992787 9992812 5 97 5.0 0.0 2.5 1.4 121 chr3L 9992691 intron dpr6 + chr3L 9992752 intron dpr6 + chr3L 9992812 intron dpr6 + chr3L_5_9990001 chr3L_9990001 RAL-894 1235 chr3L 10011574 10011622 chr3L 10011676 10011706 10 98 4.5 1.0 2.8 2.6 132 chr3L 10011574 intron dpr6 + chr3L 10011640 intron dpr6 + chr3L 10011706 intron dpr6 + chr3L_10_10010001 chr3L_10010001 RAL-894 1236 chr3L 10052889 10052920 chr3L 10052997 10053042 6 112 6.5 3.5 5.0 1.0 153 chr3L 10052889 intron dpr6 + chr3L 10052966 intron dpr6 + chr3L 10053042 intron dpr6 + chr3L_6_10050001 chr3L_10050001 RAL-894 1237 chr3L 10198612 10198656 chr3L 10198709 10198754 7 97 4.5 3.5 4.0 1.4 142 chr3L 10198612 intron ect - chr3L 10198683 intron ect - chr3L 10198754 intron ect - chr3L_7_10195001 chr3L_10195001 RAL-894 1238 chr3L 10298650 10298697 chr3L 10298757 10298804 16 107 0.5 3.0 1.8 5.7 154 chr3L 10298650 intergenic not near genes chr3L 10298727 intergenic not near genes chr3L 10298804 intergenic not near genes chr3L_16_10295001 chr3L_10295001 RAL-894 1239 chr3L 10300036 10300059 chr3L 10300148 10300171 4 112 1.0 2.0 1.5 1.6 135 chr3L 10300036 intergenic not near genes chr3L 10300104 intergenic not near genes chr3L 10300171 intergenic not near genes chr3L_4_10300001 chr3L_10300001 RAL-894 1240 chr3L 10308735 10308768 chr3L 10308832 10308865 8 92 2.5 3.5 3.0 2.0 130 chr3L 10308735 intergenic not near genes chr3L 10308800 intergenic not near genes chr3L 10308865 intergenic not near genes chr3L_8_10305001 chr3L_10305001 RAL-894 1241 chr3L 10310334 10310381 chr3L 10310451 10310498 13 115 4.5 2.5 3.5 2.9 164 chr3L 10310334 intergenic not near genes chr3L 10310416 intergenic not near genes chr3L 10310498 intergenic not near genes chr3L_13_10310001 chr3L_10310001 RAL-894 1242 chr3L 10314459 10314475 chr3L 10314559 10314575 4 100 5.0 1.0 3.0 1.0 116 chr3L 10314459 intergenic not near genes chr3L 10314517 intergenic not near genes chr3L 10314575 intergenic not near genes chr3L_4_10310001 chr3L_10310001 RAL-894 1243 chr3L 10314478 10314503 chr3L 10314558 10314597 10 90 3.5 1.0 2.2 3.1 119 chr3L 10314478 intergenic not near genes chr3L 10314538 intergenic not near genes chr3L 10314597 intergenic not near genes chr3L_10_10310001 chr3L_10310001 RAL-894 1244 chr3L 10351804 10351848 chr3L 10351900 10351918 13 92 2.0 4.5 3.2 3.1 114 chr3L 10351804 intron CR44327 + chr3L 10351861 intron CR44327 + chr3L 10351918 intron CR44327 + chr3L_13_10350001 chr3L_10350001 RAL-894 1245 chr3L 10381303 10381355 chr3L 10381402 10381454 9 99 3.5 0.0 1.8 3.2 151 chr3L 10381303 intergenic not near genes chr3L 10381378 intergenic not near genes chr3L 10381454 intergenic not near genes chr3L_9_10380001 chr3L_10380001 RAL-894 1246 chr3L 10397279 10397323 chr3L 10397378 10397422 13 96 6.0 0.5 3.2 3.1 143 chr3L 10397279 intergenic not near genes chr3L 10397350 intergenic not near genes chr3L 10397422 intergenic not near genes chr3L_13_10395001 chr3L_10395001 RAL-894 1247 chr3L 10414936 10414961 chr3L 10417314 10417353 Doc 9 2384 0.5 2.0 1.2 4.1 2417 chr3L 10414936 intergenic CG12362 + chr3L 10416144 intergenic not near genes chr3L 10417353 intergenic not near genes chr3L_9_10415001 chr3L_10415001 RAL-894 1248 chr3L 10502028 10502070 chr3L 10502136 10502176 7 107 3.0 2.0 2.5 2.0 148 chr3L 10502028 intron A2bp1 + chr3L 10502102 intron A2bp1 + chr3L 10502176 intron A2bp1 + chr3L_7_10500001 chr3L_10500001 RAL-894 1249 chr3L 10509470 10509499 chr3L 10509617 10509648 4 148 4.5 0.0 2.2 1.2 178 chr3L 10509470 intron A2bp1 + chr3L 10509559 intron A2bp1 + chr3L 10509648 intron A2bp1 + chr3L_4_10505001 chr3L_10505001 RAL-894 1250 chr3L 10509500 10509508 chr3L 10509615 10509646 4 122 4.5 0.0 2.2 1.2 146 chr3L 10509500 intron A2bp1 + chr3L 10509573 intron A2bp1 + chr3L 10509646 intron A2bp1 + chr3L_4_10505001 chr3L_10505001 RAL-894 1251 chr3L 10520056 10520071 chr3L 10520186 10520212 4 138 4.0 1.0 2.5 1.1 156 chr3L 10520056 intron A2bp1 + chr3L 10520134 intron A2bp1 + chr3L 10520212 intron A2bp1 + chr3L_4_10520001 chr3L_10520001 RAL-894 1252 chr3L 10527096 10527142 chr3L 10527364 10527410 18 266 5.5 2.5 4.0 3.6 314 chr3L 10527096 intron A2bp1 + chr3L 10527253 intron A2bp1 + chr3L 10527410 intron A2bp1 + chr3L_18_10525001 chr3L_10525001 RAL-894 1253 chr3L 10537210 10537256 chr3L 10537301 10537340 15 93 1.5 4.0 2.8 3.9 130 chr3L 10537210 intron A2bp1 + chr3L 10537275 intron A2bp1 + chr3L 10537340 intron A2bp1 + chr3L_15_10535001 chr3L_10535001 RAL-894 1254 chr3L 10613163 10613199 chr3L 10613473 10613493 10 310 0.5 5.5 3.0 2.5 330 chr3L 10613163 intergenic not near genes chr3L 10613328 intergenic not near genes chr3L 10613493 intergenic not near genes chr3L_10_10610001 chr3L_10610001 RAL-894 1255 chr3L 10621828 10621871 chr3L 10621935 10621971 12 105 4.5 3.0 3.8 2.5 143 chr3L 10621828 intergenic not near genes chr3L 10621900 intergenic not near genes chr3L 10621971 intergenic not near genes chr3L_12_10620001 chr3L_10620001 RAL-894 1256 chr3L 10658058 10658210 chr3L 10658155 10658357 36 121 0.0 0.0 0.0 36.0 299 chr3L 10658058 intron CG32066 - chr3L 10658208 intron CG32066 - chr3L 10658357 intron CG32066 - chr3L_36_10655001 chr3L_10655001 RAL-894 1257 chr3L 10694899 10694934 chr3L 10695011 10695045 13 111 2.0 4.5 3.2 3.1 146 chr3L 10694899 intron NijA - chr3L 10694972 intron NijA - chr3L 10695045 exon NijA - chr3L_13_10690001 chr3L_10690001 RAL-894 1258 chr3L 10706543 10706547 chr3L 10706703 10706707 4 160 0.0 0.0 0.0 4.0 164 chr3L 10706543 intergenic not near genes chr3L 10706625 intergenic not near genes chr3L 10706707 intergenic not near genes chr3L_4_10705001 chr3L_10705001 RAL-894 1259 chr3L 10735817 10735832 chr3L 10735926 10735931 6 107 7.0 12.5 9.8 0.6 114 chr3L 10735817 intergenic not near genes chr3L 10735874 intergenic not near genes chr3L 10735931 intergenic not near genes chr3L_6_10735001 chr3L_10735001 RAL-894 1260 chr3L 10739804 10739808 chr3L 10739899 10739911 7 102 0.5 0.0 0.2 5.8 107 chr3L 10739804 intergenic not near genes chr3L 10739858 intergenic not near genes chr3L 10739911 intergenic not near genes chr3L_7_10735001 chr3L_10735001 RAL-894 1261 chr3L 10745517 10745566 chr3L 10745617 10745666 24 100 4.5 4.5 4.5 4.4 149 chr3L 10745517 intergenic not near genes chr3L 10745592 intergenic not near genes chr3L 10745666 intergenic not near genes chr3L_24_10745001 chr3L_10745001 RAL-894 1262 chr3L 10956439 10956468 chr3L 10956572 10956593 4 133 2.0 3.0 2.5 1.1 154 chr3L 10956439 intergenic not near genes chr3L 10956516 intergenic not near genes chr3L 10956593 intergenic not near genes chr3L_4_10955001 chr3L_10955001 RAL-894 1263 chr3L 10958221 10958236 chr3L 10958312 10958328 8 97 2.0 1.5 1.8 2.9 107 chr3L 10958221 intergenic not near genes chr3L 10958274 intergenic not near genes chr3L 10958328 intergenic not near genes chr3L_8_10955001 chr3L_10955001 RAL-894 1264 chr3L 11087056 11087088 chr3L 11088850 11088897 S-element 5 1803 2.5 2.0 2.2 1.6 1841 chr3L 11087056 intron JIL-1 - chr3L 11087976 intron JIL-1 - chr3L 11088897 intron JIL-1 - chr3L_5_11085001 chr3L_11085001 RAL-894 1265 chr3L 11105275 11105320 chr3L 11107006 11107039 X-element 7 1726 1.0 1.5 1.2 3.2 1764 chr3L 11105275 intergenic not near genes chr3L 11106157 intergenic not near genes chr3L 11107039 exon CG32073 - chr3L_7_11105001 chr3L_11105001 RAL-894 1266 chr3L 11113973 11113991 chr3L 11114070 11114087 5 96 7.5 0.5 4.0 1.0 114 chr3L 11113973 intergenic fd68A -,Sod - chr3L 11114030 intergenic fd68A -,Sod - chr3L 11114087 intergenic fd68A -,Sod - chr3L_5_11110001 chr3L_11110001 RAL-894 1267 chr3L 11135508 11135801 chr3L 11135758 11135906 19 179 0.5 0.5 0.5 12.7 398 chr3L 11135508 intergenic CG14143 + chr3L 11135707 intergenic CG14143 +,CG32082 + chr3L 11135906 intergenic CG32082 +,CG14143 + chr3L_19_11135001 chr3L_11135001 RAL-894 1268 chr3L 11180638 11180655 chr3L 11180766 11180783 12 127 2.0 1.0 1.5 4.8 145 chr3L 11180638 intron GlcAT-P - chr3L 11180710 intron GlcAT-P - chr3L 11180783 intron GlcAT-P - chr3L_12_11180001 chr3L_11180001 RAL-894 1269 chr3L 11264466 11264491 chr3L 11271429 11271463 17.6 5 6969 6.0 4.5 5.2 0.8 6997 chr3L 11264466 intergenic not near genes chr3L 11267964 intergenic not near genes chr3L 11271463 intergenic not near genes chr3L_5_11265001 chr3L_11265001 RAL-894 1270 chr3L 11297606 11297653 chr3L 11297694 11297743 5 93 2.0 5.0 3.5 1.1 137 chr3L 11297606 intergenic not near genes chr3L 11297674 intergenic not near genes chr3L 11297743 intergenic not near genes chr3L_5_11295001 chr3L_11295001 RAL-894 1271 chr3L 11303029 11303049 chr3L 11303135 11303155 6 106 3.5 0.0 1.8 2.1 126 chr3L 11303029 intergenic not near genes chr3L 11303092 intergenic not near genes chr3L 11303155 intergenic not near genes chr3L_6_11300001 chr3L_11300001 RAL-894 1272 chr3L 11304721 11304734 chr3L 11304939 11304952 4 218 1.0 0.0 0.5 2.7 231 chr3L 11304721 intergenic not near genes chr3L 11304836 intergenic not near genes chr3L 11304952 intergenic not near genes chr3L_4_11300001 chr3L_11300001 RAL-894 1273 chr3L 11353114 11353163 chr3L 11353217 11353265 9 99 3.5 5.5 4.5 1.6 151 chr3L 11353114 intergenic not near genes chr3L 11353190 intergenic not near genes chr3L 11353265 intergenic not near genes chr3L_9_11350001 chr3L_11350001 RAL-894 1274 chr3L 11474607 11474656 chr3L 11474716 11474765 8 100 1.0 1.5 1.2 3.6 158 chr3L 11474607 intergenic Vha16-2 + chr3L 11474686 intergenic Vha16-2 + chr3L 11474765 intergenic Vha16-2 + chr3L_8_11470001 chr3L_11470001 RAL-894 1275 chr3L 11579717 11579721 chr3L 11580883 11580887 4 1166 4.0 9.0 6.5 0.5 1170 chr3L 11579717 intergenic CG43390 - chr3L 11580302 intergenic CG43390 - chr3L 11580887 exon CG43391 - chr3L_4_11580001 chr3L_11580001 RAL-894 1276 chr3L 11580636 11580661 chr3L 11580743 11580749 9 104 0.0 4.0 2.0 3.0 113 chr3L 11580636 intergenic CG43391 - chr3L 11580692 intergenic CG43391 - chr3L 11580749 intergenic CG43391 - chr3L_9_11580001 chr3L_11580001 RAL-894 1277 chr3L 11587910 11587946 chr3L 11588002 11588042 7 95 2.5 2.0 2.2 2.2 132 chr3L 11587910 intergenic rt - chr3L 11587976 intergenic rt - chr3L 11588042 intergenic rt - chr3L_7_11585001 chr3L_11585001 RAL-894 1278 chr3L 11588715 11588750 chr3L 11588891 11588894 8 168 2.0 2.5 2.2 2.5 179 chr3L 11588715 intergenic not near genes chr3L 11588804 intergenic not near genes chr3L 11588894 intergenic not near genes chr3L_8_11585001 chr3L_11585001 RAL-894 1279 chr3L 11661653 11661694 chr3L 11661892 11661922 7 234 1.0 1.5 1.2 3.2 269 chr3L 11661653 intron CG32085 - chr3L 11661788 intron CG32085 - chr3L 11661922 intron CG32085 - chr3L_7_11660001 chr3L_11660001 RAL-894 1280 chr3L 11673960 11673978 chr3L 11674056 11674074 10 94 3.0 0.0 1.5 4.0 114 chr3L 11673960 intron CG32085 - chr3L 11674017 intron CG32085 - chr3L 11674074 intron CG32085 - chr3L_10_11670001 chr3L_11670001 RAL-894 1281 chr3L 11678074 11678123 chr3L 11678181 11678230 13 106 3.5 2.0 2.8 3.4 156 chr3L 11678074 intron CG32085 - chr3L 11678152 intron CG32085 - chr3L 11678230 intron CG32085 - chr3L_13_11675001 chr3L_11675001 RAL-894 1282 chr3L 11723074 11723104 chr3L 11727882 11727919 Doc 6 4814 5.0 3.5 4.2 1.2 4845 chr3L 11723074 3` UTR Bmcp + chr3L 11725496 intron Bmcp + chr3L 11727919 3` UTR Bmcp + chr3L_6_11725001 chr3L_11725001 RAL-894 1283 chr3L 11743999 11744034 chr3L 11744120 11744146 12 122 2.0 3.0 2.5 3.4 147 chr3L 11743999 exon CG6024 - chr3L 11744072 intron CG6024 - chr3L 11744146 intron CG6024 - chr3L_12_11740001 chr3L_11740001 RAL-894 1284 chr3L 11757907 11757938 chr3L 11758014 11758055 5 115 4.5 0.0 2.2 1.6 148 chr3L 11757907 intron CG6024 - chr3L 11757981 intron CG6024 - chr3L 11758055 intron CG6024 - chr3L_5_11755001 chr3L_11755001 RAL-894 1285 chr3L 11763896 11763920 chr3L 11764334 11764343 5 436 1.5 2.0 1.8 1.8 447 chr3L 11763896 intron CG6024 - chr3L 11764120 intron CG6024 - chr3L 11764343 intron CG6024 - chr3L_5_11760001 chr3L_11760001 RAL-894 1286 chr3L 7749470 7749471 chr3L 11777678 11777678 8 4028207 14.5 15.5 15.0 0.5 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_8_9760001 chr3L_9760001 RAL-894 1287 chr3L 11777678 11777678 chr3L 12163305 12163305 5 385627 16.0 12.5 14.2 0.3 385627 chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L 11970492 exon Muc68E - chr3L 12163305 intron CG9760 - chr3L_5_11970001 chr3L_11970001 RAL-894 1288 chr3L 11810537 11810550 chr3L 11810635 11810648 5 98 0.0 3.5 1.8 1.8 111 chr3L 11810537 intron CG42255 - chr3L 11810592 intron CG42255 - chr3L 11810648 exon CG42255 - chr3L_5_11810001 chr3L_11810001 RAL-894 1289 chr3L 11816799 11816813 chr3L 11816894 11816934 5 113 3.5 3.0 3.2 1.2 135 chr3L 11816799 3` UTR CG5946 - chr3L 11816866 3` UTR CG5946 - chr3L 11816934 3` UTR CG5946 - chr3L_5_11815001 chr3L_11815001 RAL-894 1290 chr3L 11846403 11846411 chr3L 11846524 11846529 4 124 0.0 2.5 1.2 1.8 126 chr3L 11846403 intergenic not near genes chr3L 11846466 intergenic not near genes chr3L 11846529 intergenic not near genes chr3L_4_11845001 chr3L_11845001 RAL-894 1291 chr3L 11847121 11847174 chr3L 11847231 11847284 9 108 2.5 0.0 1.2 4.1 163 chr3L 11847121 intergenic CG12521 - chr3L 11847202 intergenic CG12521 - chr3L 11847284 intergenic CG12521 - chr3L_9_11845001 chr3L_11845001 RAL-894 1292 chr3L 11849323 11849355 chr3L 11849432 11849475 12 118 2.5 2.5 2.5 3.4 152 chr3L 11849323 intergenic not near genes chr3L 11849399 intergenic not near genes chr3L 11849475 intergenic not near genes chr3L_12_11845001 chr3L_11845001 RAL-894 1293 chr3L 11850123 11850155 chr3L 11850237 11850270 8 110 4.5 0.0 2.2 2.5 147 chr3L 11850123 intergenic not near genes chr3L 11850196 intergenic CG44837 - chr3L 11850270 intergenic CG44837 - chr3L_8_11850001 chr3L_11850001 RAL-894 1294 chr3L 11864537 11864585 chr3L 11865852 11865898 pogo 18 1308 2.0 7.5 4.8 3.1 1361 chr3L 11864537 intron CG44837 - chr3L 11865218 intron CG44837 - chr3L 11865898 intron CG44837 - chr3L_18_11865001 chr3L_11865001 RAL-894 1295 chr3L 11887239 11887287 chr3L 11887356 11887406 10 113 4.5 0.0 2.2 3.1 167 chr3L 11887239 intron CG44837 - chr3L 11887322 intron,3` UTR CG44837 -,CG5897 - chr3L 11887406 intron,3` UTR CG44837 -,CG5897 - chr3L_10_11885001 chr3L_11885001 RAL-894 1296 chr3L 11943490 11943521 chr3L 11943611 11943642 15 118 1.5 3.5 2.5 4.3 152 chr3L 11943490 intergenic Rpt4R +,CG5883 - chr3L 11943566 intergenic CG5883 -,Rpt4R + chr3L 11943642 3` UTR CG5883 - chr3L_15_11940001 chr3L_11940001 RAL-894 1297 chr3L 11945165 11945209 chr3L 11945266 11945310 10 101 2.5 2.0 2.2 3.1 145 chr3L 11945165 intergenic CG5883 - chr3L 11945238 intergenic CG5883 - chr3L 11945310 intergenic CG5883 - chr3L_10_11945001 chr3L_11945001 RAL-894 1298 chr3L 12034880 12034920 chr3L 12034962 12035017 12 94 3.0 6.0 4.5 2.2 137 chr3L 12034880 intron rols - chr3L 12034948 intron rols - chr3L 12035017 intron rols - chr3L_12_12030001 chr3L_12030001 RAL-894 1299 chr3L 12052684 12052733 chr3L 12052793 12052842 16 108 5.5 2.0 3.8 3.3 158 chr3L 12052684 intron rols - chr3L 12052763 intron rols - chr3L 12052842 intron rols - chr3L_16_12050001 chr3L_12050001 RAL-894 1300 chr3L 12075413 12075459 chr3L 12075522 12075563 4 106 2.0 0.0 1.0 2.0 150 chr3L 12075413 intron Sema-5c - chr3L 12075488 intron Sema-5c - chr3L 12075563 intron Sema-5c - chr3L_4_12075001 chr3L_12075001 RAL-894 1301 chr3L 12089060 12089109 chr3L 12089160 12089209 19 98 2.5 2.0 2.2 5.9 149 chr3L 12089060 exon CG17154 + chr3L 12089134 3` UTR CG17154 + chr3L 12089209 3` UTR CG17154 + chr3L_19_12085001 chr3L_12085001 RAL-894 1302 chr3L 12092382 12092409 chr3L 12092479 12092495 14 96 2.5 5.5 4.0 2.8 113 chr3L 12092382 intergenic not near genes chr3L 12092438 intergenic not near genes chr3L 12092495 intergenic not near genes chr3L_14_12090001 chr3L_12090001 RAL-894 1303 chr3L 12369541 12369569 chr3L 12369630 12369673 13 107 1.0 1.0 1.0 6.5 132 chr3L 12369541 intron Ncc69 - chr3L 12369607 intron Ncc69 - chr3L 12369673 intron Ncc69 - chr3L_13_12365001 chr3L_12365001 RAL-894 1304 chr3L 12371068 12371118 chr3L 12371187 12371209 5 93 1.5 0.5 1.0 2.5 141 chr3L 12371068 intron Ncc69 - chr3L 12371138 intron Ncc69 - chr3L 12371209 intron Ncc69 - chr3L_5_12370001 chr3L_12370001 RAL-894 1305 chr3L 12485403 12485406 chr3L 12485470 12485507 4 92 0.0 6.0 3.0 1.0 104 chr3L 12485403 intron CG33725 + chr3L 12485455 intron CG33725 + chr3L 12485507 intron CG33725 + chr3L_4_12485001 chr3L_12485001 RAL-894 1306 chr3L 12555603 12555654 chr3L 12555717 12555768 11 113 6.0 2.0 4.0 2.2 165 chr3L 12555603 intron sowah - chr3L 12555686 intron sowah - chr3L 12555768 intron sowah - chr3L_11_12555001 chr3L_12555001 RAL-894 1307 chr3L 12610985 12611027 chr3L 12611241 12611293 7 263 2.5 6.0 4.2 1.3 308 chr3L 12610985 intron caup + chr3L 12611139 intron caup + chr3L 12611293 intron caup + chr3L_7_12610001 chr3L_12610001 RAL-894 1308 chr3L 12626139 12626166 chr3L 12626265 12626295 9 128 0.5 3.0 1.8 3.2 156 chr3L 12626139 intergenic not near genes chr3L 12626217 intergenic not near genes chr3L 12626295 intergenic not near genes chr3L_9_12625001 chr3L_12625001 RAL-894 1309 chr3L 12647933 12647975 chr3L 12648029 12648056 9 92 4.0 3.0 3.5 2.0 123 chr3L 12647933 5` UTR CR32111 + chr3L 12647994 5` UTR CR32111 + chr3L 12648056 5` UTR CR32111 + chr3L_9_12645001 chr3L_12645001 RAL-894 1310 chr3L 12666921 12666948 chr3L 12667043 12667080 14 127 2.0 5.0 3.5 3.1 159 chr3L 12666921 intergenic not near genes chr3L 12667000 intergenic not near genes chr3L 12667080 intergenic not near genes chr3L_14_12665001 chr3L_12665001 RAL-894 1311 chr3L 12728018 12728038 chr3L 12728122 12728142 12 104 4.0 6.0 5.0 2.0 124 chr3L 12728018 intergenic not near genes chr3L 12728080 intergenic not near genes chr3L 12728142 intergenic not near genes chr3L_12_12725001 chr3L_12725001 RAL-894 1312 chr3L 12857977 12858003 chr3L 12858091 12858117 12 113 1.0 2.5 1.8 4.3 140 chr3L 12857977 3` UTR CG32107 - chr3L 12858047 3` UTR CG32107 - chr3L 12858117 3` UTR CG32107 - chr3L_12_12855001 chr3L_12855001 RAL-894 1313 chr3L 12872222 12872266 chr3L 12872325 12872370 9 101 1.5 3.0 2.2 2.8 148 chr3L 12872222 intergenic not near genes chr3L 12872296 intergenic not near genes chr3L 12872370 intergenic not near genes chr3L_9_12870001 chr3L_12870001 RAL-894 1314 chr3L 12874905 12874917 chr3L 12877217 12877217 jockey 4 2308 3.5 2.5 3.0 1.0 2312 chr3L 12874905 intergenic not near genes chr3L 12876061 intergenic not near genes chr3L 12877217 intergenic not near genes chr3L_4_12875001 chr3L_12875001 RAL-894 1315 chr3L 12874925 12874959 chr3L 12877215 12877257 jockey 7 2303 2.0 2.5 2.2 2.2 2332 chr3L 12874925 intergenic not near genes chr3L 12876091 intergenic not near genes chr3L 12877257 intergenic not near genes chr3L_7_12875001 chr3L_12875001 RAL-894 1316 chr3L 12879195 12879243 chr3L 12879298 12879340 10 102 4.0 3.5 3.8 2.1 145 chr3L 12879195 intergenic not near genes chr3L 12879268 intergenic not near genes chr3L 12879340 intergenic not near genes chr3L_10_12875001 chr3L_12875001 RAL-894 1317 chr3L 12880741 12880788 chr3L 12880836 12880884 9 94 4.5 2.0 3.2 2.1 143 chr3L 12880741 intergenic not near genes chr3L 12880812 intergenic not near genes chr3L 12880884 intergenic not near genes chr3L_9_12880001 chr3L_12880001 RAL-894 1318 chr3L 12894789 12894811 chr3L 12894887 12894894 4 94 8.0 4.5 6.2 0.6 105 chr3L 12894789 intergenic CG14118 + chr3L 12894842 intergenic CG14118 + chr3L 12894894 intergenic CG14118 + chr3L_4_12890001 chr3L_12890001 RAL-894 1319 chr3L 12900636 12900665 chr3L 12900956 12900983 5 313 1.5 1.0 1.2 2.3 347 chr3L 12900636 intergenic not near genes chr3L 12900810 intergenic CG12520 - chr3L 12900983 intergenic CG12520 - chr3L_5_12900001 chr3L_12900001 RAL-894 1320 chr3L 12929712 12929744 chr3L 12930048 12930080 14 333 0.0 2.5 1.2 6.4 368 chr3L 12929712 intergenic not near genes chr3L 12929896 intergenic not near genes chr3L 12930080 intergenic not near genes chr3L_14_12925001 chr3L_12925001 RAL-894 1321 chr3L 12957787 12957818 chr3L 12962267 12962301 copia 10 4493 1.0 1.5 1.2 4.5 4514 chr3L 12957787 intergenic not near genes chr3L 12960044 intergenic not near genes chr3L 12962301 intergenic not near genes chr3L_10_12960001 chr3L_12960001 RAL-894 1322 chr3L 12967120 12967152 chr3L 12967224 12967256 7 97 4.5 4.0 4.2 1.3 136 chr3L 12967120 exon Or69a - chr3L 12967188 exon Or69a - chr3L 12967256 exon Or69a - chr3L_7_12965001 chr3L_12965001 RAL-894 1323 chr3L 13015702 13015747 chr3L 13015803 13015844 10 100 1.0 3.5 2.2 3.1 142 chr3L 13015702 intergenic CG11267 +,MICAL-like - chr3L 13015773 intergenic CG11267 +,MICAL-like - chr3L 13015844 intergenic CG11267 + chr3L_10_13015001 chr3L_13015001 RAL-894 1324 chr3L 13085042 13085082 chr3L 13085140 13085180 7 97 3.5 6.0 4.8 1.2 138 chr3L 13085042 intergenic not near genes chr3L 13085111 intergenic not near genes chr3L 13085180 intergenic not near genes chr3L_7_13085001 chr3L_13085001 RAL-894 1325 chr3L 13144098 13144149 chr3L 13144195 13144246 16 91 4.5 3.0 3.8 3.3 148 chr3L 13144098 intergenic not near genes chr3L 13144172 intergenic not near genes chr3L 13144246 intergenic not near genes chr3L_16_13140001 chr3L_13140001 RAL-894 1326 chr3L 13194049 13194091 chr3L 13194148 13194189 4 92 2.5 2.0 2.2 1.2 140 chr3L 13194049 intergenic not near genes chr3L 13194119 intergenic not near genes chr3L 13194189 intergenic not near genes chr3L_4_13190001 chr3L_13190001 RAL-894 1327 chr3L 13267281 13267317 chr3L 13267406 13267450 7 128 0.5 1.5 1.0 3.5 169 chr3L 13267281 intron caps + chr3L 13267366 intron caps + chr3L 13267450 intron caps + chr3L_7_13265001 chr3L_13265001 RAL-894 1328 chr3L 13296505 13296548 chr3L 13296616 13296659 12 110 1.5 7.0 4.2 2.3 154 chr3L 13296505 intergenic Sfp70A4 -,CR45253 + chr3L 13296582 3` UTR Sfp70A4 - chr3L 13296659 3` UTR Sfp70A4 - chr3L_12_13295001 chr3L_13295001 RAL-894 1329 chr3L 13338296 13338315 chr3L 13338381 13338431 12 107 2.0 4.0 3.0 3.0 135 chr3L 13338296 intergenic not near genes chr3L 13338364 intergenic not near genes chr3L 13338431 intergenic not near genes chr3L_12_13335001 chr3L_13335001 RAL-894 1330 chr3L 13400526 13400539 chr3L 13400613 13400635 6 92 0.5 3.0 1.8 2.1 109 chr3L 13400526 intron sens - chr3L 13400580 intron sens - chr3L 13400635 intron sens - chr3L_6_13400001 chr3L_13400001 RAL-894 1331 chr3L 13424797 13424833 chr3L 13424884 13424898 9 88 2.0 2.0 2.0 3.0 101 chr3L 13424797 exon CG14106 - chr3L 13424848 exon CG14106 - chr3L 13424898 exon CG14106 - chr3L_9_13420001 chr3L_13420001 RAL-894 1332 chr3L 13452645 13452681 chr3L 13452753 13452788 13 104 0.5 7.0 3.8 2.7 143 chr3L 13452645 intron CG10738 + chr3L 13452716 intron CG10738 + chr3L 13452788 intron CG10738 + chr3L_13_13450001 chr3L_13450001 RAL-894 1333 chr3L 13455739 13455784 chr3L 13455910 13455959 11 166 2.0 3.0 2.5 3.1 220 chr3L 13455739 intron CG10738 + chr3L 13455849 intron CG10738 + chr3L 13455959 intron CG10738 + chr3L_11_13455001 chr3L_13455001 RAL-894 1334 chr3L 13525145 13525172 chr3L 13532961 13532965 roo 7 7811 13.0 5.0 9.0 0.7 7820 chr3L 13525145 intergenic not near genes chr3L 13529055 intergenic not near genes chr3L 13532965 intergenic not near genes chr3L_7_13525001 chr3L_13525001 RAL-894 1335 chr3L 13596023 13596070 chr3L 13596158 13596181 7 131 4.5 0.0 2.2 2.2 158 chr3L 13596023 intron bru-3 - chr3L 13596102 intron bru-3 - chr3L 13596181 intron bru-3 - chr3L_7_13595001 chr3L_13595001 RAL-894 1336 chr3L 13636791 13636806 chr3L 13636902 13636909 4 106 3.5 4.0 3.8 0.8 118 chr3L 13636791 intron bru-3 - chr3L 13636850 intron bru-3 - chr3L 13636909 intron bru-3 - chr3L_4_13635001 chr3L_13635001 RAL-894 1337 chr3L 13636811 13636835 chr3L 13636901 13636931 5 100 1.5 4.0 2.8 1.3 120 chr3L 13636811 intron bru-3 - chr3L 13636871 intron bru-3 - chr3L 13636931 intron bru-3 - chr3L_5_13635001 chr3L_13635001 RAL-894 1338 chr3L 13677512 13677753 chr3L 13677609 13677904 16 100 0.0 3.5 1.8 5.7 392 chr3L 13677512 intron bru-3 - chr3L 13677708 intron bru-3 - chr3L 13677904 intron bru-3 - chr3L_16_13675001 chr3L_13675001 RAL-894 1339 chr3L 13745280 13745289 chr3L 13745389 13745398 4 109 3.0 0.0 1.5 1.6 118 chr3L 13745280 intron bru-3 - chr3L 13745339 intron bru-3 - chr3L 13745398 intron bru-3 - chr3L_4_13745001 chr3L_13745001 RAL-894 1340 chr3L 13778309 13778336 chr3L 13778453 13778486 4 148 0.5 3.0 1.8 1.4 177 chr3L 13778309 5` UTR bru-3 - chr3L 13778398 intron bru-3 - chr3L 13778486 intron bru-3 - chr3L_4_13775001 chr3L_13775001 RAL-894 1341 chr3L 13804533 13804575 chr3L 13822837 13822881 roo 6 18306 2.5 1.0 1.8 2.1 18348 chr3L 13804533 intergenic not near genes chr3L 13813707 intergenic not near genes chr3L 13822881 intergenic not near genes chr3L_6_13810001 chr3L_13810001 RAL-894 1342 chr3L 13833969 13833980 chr3L 13834091 13834102 4 126 5.5 3.5 4.5 0.7 133 chr3L 13833969 intergenic not near genes chr3L 13834036 intergenic not near genes chr3L 13834102 intergenic not near genes chr3L_4_13830001 chr3L_13830001 RAL-894 1343 chr3L 13833983 13834008 chr3L 13834089 13834142 6 119 1.5 3.5 2.5 1.7 159 chr3L 13833983 intergenic not near genes chr3L 13834062 intergenic not near genes chr3L 13834142 intergenic not near genes chr3L_6_13830001 chr3L_13830001 RAL-894 1344 chr3L 13884360 13884387 chr3L 13884471 13884498 6 108 6.5 3.0 4.8 1.0 138 chr3L 13884360 intron dysc - chr3L 13884429 intron dysc - chr3L 13884498 intron dysc - chr3L_6_13880001 chr3L_13880001 RAL-894 1345 chr3L 13894143 13894156 chr3L 13894224 13894252 4 89 0.0 1.0 0.5 2.7 109 chr3L 13894143 intron dysc - chr3L 13894198 intron dysc - chr3L 13894252 intron dysc - chr3L_4_13890001 chr3L_13890001 RAL-894 1346 chr3L 13920401 13920433 chr3L 13920501 13920533 10 99 3.0 4.0 3.5 2.2 132 chr3L 13920401 intron Rgl - chr3L 13920467 intron Rgl - chr3L 13920533 intron Rgl - chr3L_10_13920001 chr3L_13920001 RAL-894 1347 chr3L 14115541 14115542 chr3L 14115609 14115639 4 81 3.5 1.5 2.5 1.1 98 chr3L 14115541 intron Sox21b - chr3L 14115590 intron Sox21b - chr3L 14115639 intron Sox21b - chr3L_4_14115001 chr3L_14115001 RAL-894 1348 chr3L 14141394 14141411 chr3L 14141501 14141518 5 105 4.0 0.0 2.0 1.7 124 chr3L 14141394 intergenic not near genes chr3L 14141456 intergenic not near genes chr3L 14141518 intergenic not near genes chr3L_5_14140001 chr3L_14140001 RAL-894 1349 chr3L 14214830 14214872 chr3L 14214926 14214976 9 103 0.0 2.5 1.2 4.1 146 chr3L 14214830 intron nuf + chr3L 14214903 intron nuf + chr3L 14214976 intron nuf + chr3L_9_14210001 chr3L_14210001 RAL-894 1350 chr3L 14267359 14267370 chr3L 14271819 14271830 F-element 4 4460 6.5 9.5 8.0 0.4 4471 chr3L 14267359 intergenic not near genes chr3L 14269594 intergenic not near genes chr3L 14271830 intergenic not near genes chr3L_4_14265001 chr3L_14265001 RAL-894 1351 chr3L 14267374 14267397 chr3L 14271817 14271848 F-element 5 4455 5.0 9.5 7.2 0.6 4474 chr3L 14267374 intergenic not near genes chr3L 14269611 intergenic not near genes chr3L 14271848 intergenic not near genes chr3L_5_14265001 chr3L_14265001 RAL-894 1352 chr3L 14341402 14341435 chr3L 14341551 14341580 4 148 0.0 0.5 0.2 3.3 178 chr3L 14341402 intron fz + chr3L 14341491 intron fz + chr3L 14341580 intron fz + chr3L_4_14340001 chr3L_14340001 RAL-894 1353 chr3L 14356506 14356514 chr3L 14356606 14356614 4 99 6.0 1.0 3.5 0.9 108 chr3L 14356506 intron fz + chr3L 14356560 intron fz + chr3L 14356614 intron fz + chr3L_4_14355001 chr3L_14355001 RAL-894 1354 chr3L 14356515 14356547 chr3L 14356604 14356647 7 95 2.0 0.5 1.2 3.2 132 chr3L 14356515 intron fz + chr3L 14356581 intron fz + chr3L 14356647 intron fz + chr3L_7_14355001 chr3L_14355001 RAL-894 1355 chr3L 14439234 14439245 chr3L 14439377 14439428 5 165 1.5 5.5 3.5 1.1 194 chr3L 14439234 intron bbg - chr3L 14439331 intron bbg - chr3L 14439428 intron bbg - chr3L_5_14435001 chr3L_14435001 RAL-894 1356 chr3L 14468434 14468477 chr3L 14473652 14473692 copia 11 5220 3.5 3.0 3.2 2.6 5258 chr3L 14468434 intron bbg - chr3L 14471063 intron bbg - chr3L 14473692 intron bbg - chr3L_11_14470001 chr3L_14470001 RAL-894 1357 chr3L 14486002 14486048 chr3L 14486098 14486134 5 95 2.0 4.5 3.2 1.2 132 chr3L 14486002 intron bbg - chr3L 14486068 intron bbg - chr3L 14486134 intron bbg - chr3L_5_14485001 chr3L_14485001 RAL-894 1358 chr3L 14522085 14522128 chr3L 14522204 14522247 14 118 1.5 5.0 3.2 3.3 162 chr3L 14522085 intron bbg - chr3L 14522166 intron bbg - chr3L 14522247 intron bbg - chr3L_14_14520001 chr3L_14520001 RAL-894 1359 chr3L 14546745 14546755 chr3L 14546918 14546928 5 173 0.0 3.0 1.5 2.0 183 chr3L 14546745 intron CG9238 - chr3L 14546836 intron CG9238 - chr3L 14546928 intron CG9238 - chr3L_5_14545001 chr3L_14545001 RAL-894 1360 chr3L 14584144 14584189 chr3L 14584251 14584296 8 106 1.0 3.0 2.0 2.7 152 chr3L 14584144 intron HGTX - chr3L 14584220 intron HGTX - chr3L 14584296 intron HGTX - chr3L_8_14580001 chr3L_14580001 RAL-894 1361 chr3L 14596130 14596143 chr3L 14596230 14596243 5 96 0.0 0.5 0.2 4.2 113 chr3L 14596130 intron HGTX - chr3L 14596186 intron HGTX - chr3L 14596243 intron HGTX - chr3L_5_14595001 chr3L_14595001 RAL-894 1362 chr3L 14603061 14603078 chr3L 14603158 14603161 4 94 0.0 3.5 1.8 1.4 100 chr3L 14603061 intergenic not near genes chr3L 14603111 intergenic not near genes chr3L 14603161 intergenic not near genes chr3L_4_14600001 chr3L_14600001 RAL-894 1363 chr3L 14724809 14724835 chr3L 14724913 14724939 7 104 0.0 3.5 1.8 2.5 130 chr3L 14724809 intron ome + chr3L 14724874 intron ome + chr3L 14724939 intron ome + chr3L_7_14720001 chr3L_14720001 RAL-894 1364 chr3L 14725587 14725621 chr3L 14728596 14728635 Doc 4 3013 6.0 6.0 6.0 0.6 3048 chr3L 14725587 intron ome + chr3L 14727111 intron ome + chr3L 14728635 intron ome + chr3L_4_14725001 chr3L_14725001 RAL-894 1365 chr3L 14917645 14917680 chr3L 14917748 14917776 4 98 7.0 3.5 5.2 0.6 131 chr3L 14917645 intron DCX-EMAP + chr3L 14917710 intron DCX-EMAP + chr3L 14917776 intron DCX-EMAP + chr3L_4_14915001 chr3L_14915001 RAL-894 1366 chr3L 14922099 14922115 chr3L 14922221 14922233 4 122 5.5 3.5 4.5 0.7 134 chr3L 14922099 intron DCX-EMAP + chr3L 14922166 intron DCX-EMAP + chr3L 14922233 intron DCX-EMAP + chr3L_4_14920001 chr3L_14920001 RAL-894 1367 chr3L 14933430 14933461 chr3L 14933532 14933563 9 99 0.5 2.0 1.2 4.1 133 chr3L 14933430 intron DCX-EMAP + chr3L 14933496 intron DCX-EMAP + chr3L 14933563 intron DCX-EMAP + chr3L_9_14930001 chr3L_14930001 RAL-894 1368 chr3L 14954203 14954397 chr3L 14956040 14956086 transib2 11 1822 0.0 5.5 2.8 2.9 1883 chr3L 14954203 intergenic not near genes chr3L 14955144 intergenic not near genes chr3L 14956086 intergenic not near genes chr3L_11_14955001 chr3L_14955001 RAL-894 1369 chr3L 14958408 14958457 chr3L 14958511 14958560 13 99 3.0 3.5 3.2 3.1 152 chr3L 14958408 intergenic not near genes chr3L 14958484 intergenic not near genes chr3L 14958560 intergenic not near genes chr3L_13_14955001 chr3L_14955001 RAL-894 1370 chr3L 14970746 14970764 chr3L 14971076 14971094 F-element 9 329 9.0 0.0 4.5 1.6 348 chr3L 14970746 intergenic Tom + chr3L 14970920 intergenic not near genes chr3L 14971094 intergenic not near genes chr3L_9_14970001 chr3L_14970001 RAL-894 1371 chr3L 14973628 14973664 chr3L 14973728 14973749 9 93 3.0 9.0 6.0 1.3 121 chr3L 14973628 intergenic Brd + chr3L 14973688 intergenic Brd + chr3L 14973749 intergenic not near genes chr3L_9_14970001 chr3L_14970001 RAL-894 1372 chr3L 15035529 15035574 chr3L 15036472 15036508 14 948 1.0 5.0 3.0 3.5 979 chr3L 15035529 intron Sytbeta - chr3L 15036018 intron Sytbeta - chr3L 15036508 intron Sytbeta - chr3L_14_15035001 chr3L_15035001 RAL-894 1373 chr3L 15062159 15062185 chr3L 15062273 15062299 13 114 7.0 5.0 6.0 1.9 140 chr3L 15062159 intron Sytbeta - chr3L 15062229 intron,3` UTR Sytbeta -,CR43684 - chr3L 15062299 intron,3` UTR Sytbeta -,CR43684 - chr3L_13_15060001 chr3L_15060001 RAL-894 1374 chr3L 15085031 15085070 chr3L 15086217 15086255 1360 7 1181 3.5 4.0 3.8 1.5 1224 chr3L 15085031 intron cp309 - chr3L 15085643 intron cp309 - chr3L 15086255 intron cp309 - chr3L_7_15085001 chr3L_15085001 RAL-894 1375 chr3L 15124302 15124331 chr3L 15124549 15124589 7 252 4.0 5.0 4.5 1.3 287 chr3L 15124302 intron,5` UTR Cep135 +,CG16959 - chr3L 15124446 intron,intron Cep135 +,CG16959 - chr3L 15124589 intron,intron Cep135 +,CG16959 - chr3L_7_15120001 chr3L_15120001 RAL-894 1376 chr3L 15177343 15177377 chr3L 15177438 15177451 7 92 2.5 2.5 2.5 2.0 108 chr3L 15177343 intergenic not near genes chr3L 15177397 intergenic not near genes chr3L 15177451 intergenic not near genes chr3L_7_15175001 chr3L_15175001 RAL-894 1377 chr3L 15219728 15219773 chr3L 15219828 15219875 9 102 3.0 2.5 2.8 2.4 147 chr3L 15219728 intergenic not near genes chr3L 15219802 intergenic not near genes chr3L 15219875 intergenic not near genes chr3L_9_15215001 chr3L_15215001 RAL-894 1378 chr3L 15295012 15295063 chr3L 15295111 15295161 5 94 1.0 5.5 3.2 1.2 149 chr3L 15295012 intergenic not near genes chr3L 15295086 intergenic not near genes chr3L 15295161 intergenic not near genes chr3L_5_15295001 chr3L_15295001 RAL-894 1379 chr3L 15295779 15295800 chr3L 15298639 15298663 gypsy5 6 2860 7.0 11.5 9.2 0.6 2884 chr3L 15295779 intergenic not near genes chr3L 15297221 intergenic not near genes chr3L 15298663 intergenic Best4 + chr3L_6_15295001 chr3L_15295001 RAL-894 1380 chr3L 15333122 15333167 chr3L 15333222 15333269 7 100 1.5 3.5 2.5 2.0 147 chr3L 15333122 intergenic CR43247 + chr3L 15333196 intergenic CR43247 + chr3L 15333269 intergenic CR43247 + chr3L_7_15330001 chr3L_15330001 RAL-894 1381 chr3L 15384958 15384988 chr3L 15385101 15385112 12 141 4.0 2.5 3.2 2.9 154 chr3L 15384958 intergenic not near genes chr3L 15385035 intergenic not near genes chr3L 15385112 intergenic not near genes chr3L_12_15385001 chr3L_15385001 RAL-894 1382 chr3L 15423743 15423784 chr3L 15426606 15426643 opus 10 2862 5.0 1.5 3.2 2.4 2900 chr3L 15423743 intergenic not near genes chr3L 15425193 intergenic not near genes chr3L 15426643 intergenic not near genes chr3L_10_15425001 chr3L_15425001 RAL-894 1383 chr3L 15444643 15444678 chr3L 15444757 15444771 7 106 5.0 4.0 4.5 1.3 128 chr3L 15444643 intergenic not near genes chr3L 15444707 intergenic not near genes chr3L 15444771 intergenic not near genes chr3L_7_15440001 chr3L_15440001 RAL-894 1384 chr3L 15466040 15466136 chr3L 15466128 15466245 7 111 0.0 0.0 0.0 7.0 205 chr3L 15466040 intergenic not near genes chr3L 15466142 intergenic not near genes chr3L 15466245 intergenic not near genes chr3L_7_15465001 chr3L_15465001 RAL-894 1385 chr3L 15466510 15466548 chr3L 15466608 15466652 6 100 2.5 2.5 2.5 1.7 142 chr3L 15466510 intergenic not near genes chr3L 15466581 intergenic not near genes chr3L 15466652 intergenic not near genes chr3L_6_15465001 chr3L_15465001 RAL-894 1386 chr3L 15482583 15482615 chr3L 15482684 15482716 9 101 4.5 3.0 3.8 1.9 133 chr3L 15482583 intergenic not near genes chr3L 15482650 intergenic not near genes chr3L 15482716 intergenic not near genes chr3L_9_15480001 chr3L_15480001 RAL-894 1387 chr3L 15483039 15483088 chr3L 15483256 15483279 13 209 3.5 1.5 2.5 3.7 240 chr3L 15483039 intergenic not near genes chr3L 15483159 intergenic not near genes chr3L 15483279 intergenic not near genes chr3L_13_15480001 chr3L_15480001 RAL-894 1388 chr3L 15511962 15512000 chr3L 15512051 15512098 12 94 4.0 3.0 3.5 2.7 136 chr3L 15511962 intron Eip71CD + chr3L 15512030 intron Eip71CD + chr3L 15512098 intron Eip71CD + chr3L_12_15510001 chr3L_15510001 RAL-894 1389 chr3L 15536602 15536650 chr3L 15536702 15536735 10 97 7.0 7.5 7.2 1.2 133 chr3L 15536602 intron CrebA + chr3L 15536668 intron CrebA + chr3L 15536735 intron CrebA + chr3L_10_15535001 chr3L_15535001 RAL-894 1390 chr3L 15541601 15541649 chr3L 15541712 15541760 8 111 1.0 1.5 1.2 3.6 159 chr3L 15541601 intron CrebA + chr3L 15541680 intron CrebA + chr3L 15541760 intron CrebA + chr3L_8_15540001 chr3L_15540001 RAL-894 1391 chr3L 15600150 15600197 chr3L 15600255 15600318 8 118 4.5 0.0 2.2 2.5 168 chr3L 15600150 intron RhoGAP71E + chr3L 15600234 intron RhoGAP71E + chr3L 15600318 intron RhoGAP71E + chr3L_8_15600001 chr3L_15600001 RAL-894 1392 chr3L 15617771 15617808 chr3L 15617981 15618017 7 206 4.0 5.5 4.8 1.2 246 chr3L 15617771 intron comm3 - chr3L 15617894 intron comm3 - chr3L 15618017 intron comm3 - chr3L_7_15615001 chr3L_15615001 RAL-894 1393 chr3L 15615946 15615999 chr3L 15618821 15618853 6 2858 12.0 5.5 8.8 0.6 2907 chr3L 15615946 intron comm3 - chr3L 15617400 intron comm3 - chr3L 15618853 intron comm3 - chr3L_6_15615001 chr3L_15615001 RAL-894 1394 chr3L 15744597 15744614 chr3L 15745063 15745068 4 460 25.0 16.0 20.5 0.2 471 chr3L 15744597 intergenic not near genes chr3L 15744832 intergenic not near genes chr3L 15745068 intergenic not near genes chr3L_4_15740001 chr3L_15740001 RAL-894 1395 chr3L 15836240 15836272 chr3L 15836331 15836378 13 101 3.0 6.5 4.8 2.2 138 chr3L 15836240 exon CG15715 - chr3L 15836309 intron CG15715 - chr3L 15836378 intron CG15715 - chr3L_13_15835001 chr3L_15835001 RAL-894 1396 chr3L 15871579 15871617 chr3L 15871682 15871721 15 104 2.5 3.5 3.0 3.8 142 chr3L 15871579 intron pHCl - chr3L 15871650 intron pHCl - chr3L 15871721 intron pHCl - chr3L_15_15870001 chr3L_15870001 RAL-894 1397 chr3L 15883175 15883220 chr3L 15883487 15883517 8 305 2.5 1.5 2.0 2.7 342 chr3L 15883175 intron pHCl - chr3L 15883346 intron pHCl - chr3L 15883517 intron pHCl - chr3L_8_15880001 chr3L_15880001 RAL-894 1398 chr3L 15912533 15912582 chr3L 15912631 15912680 10 94 1.0 3.0 2.0 3.3 147 chr3L 15912533 intron sff - chr3L 15912606 intron sff - chr3L 15912680 intron sff - chr3L_10_15910001 chr3L_15910001 RAL-894 1399 chr3L 15939840 15939882 chr3L 15939935 15939978 15 95 3.5 6.5 5.0 2.5 138 chr3L 15939840 intron Pka-C3 - chr3L 15939909 intron Pka-C3 - chr3L 15939978 intron Pka-C3 - chr3L_15_15935001 chr3L_15935001 RAL-894 1400 chr3L 15981658 15981708 chr3L 15981764 15981814 6 106 2.0 3.0 2.5 1.7 156 chr3L 15981658 intron,3` UTR brm -,CG17027 + chr3L 15981736 intron,3` UTR brm -,CG17027 + chr3L 15981814 intron,3` UTR brm -,CG17027 + chr3L_6_15980001 chr3L_15980001 RAL-894 1401 chr3L 15989221 15989226 chr3L 15989324 15989329 4 103 2.0 3.5 2.8 1.1 108 chr3L 15989221 intron Hip14 + chr3L 15989275 intron Hip14 + chr3L 15989329 intron Hip14 + chr3L_4_15985001 chr3L_15985001 RAL-894 1402 chr3L 16047859 16047879 chr3L 16047995 16048014 5 136 0.0 3.0 1.5 2.0 155 chr3L 16047859 intron th - chr3L 16047936 intron th - chr3L 16048014 intron th - chr3L_5_16045001 chr3L_16045001 RAL-894 1403 chr3L 16070721 16070761 chr3L 16070818 16070858 17 97 4.0 1.5 2.8 4.5 137 chr3L 16070721 intron Mbs + chr3L 16070790 intron Mbs + chr3L 16070858 exon Mbs + chr3L_17_16070001 chr3L_16070001 RAL-894 1404 chr3L 16072298 16072350 chr3L 16072400 16072426 15 90 4.0 1.5 2.8 3.9 128 chr3L 16072298 intron Mbs + chr3L 16072362 intron Mbs + chr3L 16072426 intron Mbs + chr3L_15_16070001 chr3L_16070001 RAL-894 1405 chr3L 16149182 16149233 chr3L 16149291 16149336 17 105 4.0 4.0 4.0 3.4 154 chr3L 16149182 intron CG5151 - chr3L 16149259 intron CG5151 - chr3L 16149336 intron CG5151 - chr3L_17_16145001 chr3L_16145001 RAL-894 1406 chr3L 16170563 16170575 chr3L 16170664 16170676 4 101 2.0 3.5 2.8 1.1 113 chr3L 16170563 intergenic CG33795 -,CG33796 - chr3L 16170620 intergenic CG33795 - chr3L 16170676 intergenic CG33795 - chr3L_4_16170001 chr3L_16170001 RAL-894 1407 chr3L 16182054 16182095 chr3L 16182194 16182235 11 137 0.5 5.0 2.8 2.9 181 chr3L 16182054 intergenic not near genes chr3L 16182144 intergenic not near genes chr3L 16182235 intergenic not near genes chr3L_11_16180001 chr3L_16180001 RAL-894 1408 chr3L 16184088 16184139 chr3L 16188927 16188948 X-element 4 4832 2.5 2.0 2.2 1.2 4860 chr3L 16184088 intergenic not near genes chr3L 16186518 intergenic not near genes chr3L 16188948 intergenic not near genes chr3L_4_16185001 chr3L_16185001 RAL-894 1409 chr3L 16198849 16198877 chr3L 16199163 16199191 8 317 3.5 2.5 3.0 2.0 342 chr3L 16198849 3` UTR CG33687 + chr3L 16199020 intergenic CG33687 +,CG33688 + chr3L 16199191 intergenic CG33688 +,CG33687 + chr3L_8_16195001 chr3L_16195001 RAL-894 1410 chr3L 16279065 16279102 chr3L 16279166 16279186 11 98 3.0 1.5 2.2 3.4 121 chr3L 16279065 exon CG13050 - chr3L 16279126 intron CG13050 - chr3L 16279186 intron CG13050 - chr3L_11_16275001 chr3L_16275001 RAL-894 1411 chr3L 16437053 16437103 chr3L 16437152 16437209 7 103 1.5 0.5 1.0 3.5 156 chr3L 16437053 intron,intron CG33158 +,dsx-c73A - chr3L 16437131 intron,intron CG33158 +,dsx-c73A - chr3L 16437209 intron,intron CG33158 +,dsx-c73A - chr3L_7_16435001 chr3L_16435001 RAL-894 1412 chr3L 16443842 16443879 chr3L 16446194 16446228 Doc 10 2355 0.0 3.5 1.8 3.6 2386 chr3L 16443842 intron,intron CG33158 +,dsx-c73A - chr3L 16445035 intron,intron CG33158 +,dsx-c73A - chr3L 16446228 intron,intron CG33158 +,dsx-c73A - chr3L_10_16445001 chr3L_16445001 RAL-894 1413 chr3L 16450020 16450052 chr3L 16450125 16450157 10 105 0.5 1.0 0.8 5.6 137 chr3L 16450020 intron,intron CG33158 +,dsx-c73A - chr3L 16450088 intron,intron CG33158 +,dsx-c73A - chr3L 16450157 intron,exon CG33158 +,dsx-c73A - chr3L_10_16450001 chr3L_16450001 RAL-894 1414 chr3L 16493973 16494006 chr3L 16494493 16494501 jockey 5 522 7.5 5.0 6.2 0.7 528 chr3L 16493973 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494237 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494501 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_5_16490001 chr3L_16490001 RAL-894 1415 chr3L 16509375 16509388 chr3L 16509546 16509559 7 170 6.0 3.0 4.5 1.3 184 chr3L 16509375 intron CG43373 - chr3L 16509467 intron CG43373 - chr3L 16509559 intron CG43373 - chr3L_7_16505001 chr3L_16505001 RAL-894 1416 chr3L 16509390 16509411 chr3L 16509545 16509582 7 166 4.5 2.5 3.5 1.6 192 chr3L 16509390 intron CG43373 - chr3L 16509486 intron CG43373 - chr3L 16509582 intron CG43373 - chr3L_7_16505001 chr3L_16505001 RAL-894 1417 chr3L 16515319 16515344 chr3L 16515423 16515432 8 101 0.5 3.0 1.8 2.9 113 chr3L 16515319 intron CG43373 - chr3L 16515376 intron CG43373 - chr3L 16515432 intron CG43373 - chr3L_8_16515001 chr3L_16515001 RAL-894 1418 chr3L 16533545 16533583 chr3L 16533675 16533713 5 127 3.5 4.0 3.8 1.0 168 chr3L 16533545 intron CG43373 - chr3L 16533629 intron CG43373 - chr3L 16533713 intron CG43373 - chr3L_5_16530001 chr3L_16530001 RAL-894 1419 chr3L 16550037 16550085 chr3L 16550182 16550230 11 144 2.5 3.5 3.0 2.8 193 chr3L 16550037 intergenic not near genes chr3L 16550134 intergenic not near genes chr3L 16550230 intergenic not near genes chr3L_11_16550001 chr3L_16550001 RAL-894 1420 chr3L 16610671 16610717 chr3L 16610775 16610800 8 100 5.5 1.0 3.2 1.9 129 chr3L 16610671 3` UTR Su(P) - chr3L 16610736 3` UTR Su(P) - chr3L 16610800 exon Su(P) - chr3L_8_16610001 chr3L_16610001 RAL-894 1421 chr3L 16616501 16616541 chr3L 16621849 16621863 297 10 5339 3.0 5.0 4.0 2.0 5362 chr3L 16616501 3` UTR Abl - chr3L 16619182 3` UTR Abl - chr3L 16621863 3` UTR Abl - chr3L_10_16615001 chr3L_16615001 RAL-894 1422 chr3L 16684006 16684048 chr3L 16689247 16689277 copia 14 5240 6.5 5.5 6.0 2.0 5271 chr3L 16684006 intron,intron Lasp -,CG43954 - chr3L 16686642 intron,intron Lasp -,CG43954 - chr3L 16689277 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_14_16685001 chr3L_16685001 RAL-894 1423 chr3L 16714400 16714441 chr3L 16714640 16714680 8 240 2.0 5.5 3.8 1.7 280 chr3L 16714400 intron Dab + chr3L 16714540 intron Dab + chr3L 16714680 intron Dab + chr3L_8_16710001 chr3L_16710001 RAL-894 1424 chr3L 16714840 16714873 chr3L 16714934 16714977 8 101 4.0 3.0 3.5 1.8 137 chr3L 16714840 intron Dab + chr3L 16714908 intron Dab + chr3L 16714977 intron Dab + chr3L_8_16710001 chr3L_16710001 RAL-894 1425 chr3L 16728080 16728117 chr3L 16728185 16728218 6 107 2.5 0.0 1.2 2.7 138 chr3L 16728080 intergenic PGRP-SB1 -,Dbp73D - chr3L 16728149 intergenic PGRP-SB1 -,Dbp73D - chr3L 16728218 intergenic PGRP-SB1 -,Dbp73D - chr3L_6_16725001 chr3L_16725001 RAL-894 1426 chr3L 16739367 16739372 chr3L 16739594 16739599 4 227 13.0 1.0 7.0 0.5 232 chr3L 16739367 intergenic CG9701 + chr3L 16739483 intergenic CG9701 + chr3L 16739599 intergenic CG9701 + chr3L_4_16735001 chr3L_16735001 RAL-894 1427 chr3L 16808019 16808074 chr3L 16808115 16808173 11 96 3.0 1.0 2.0 3.7 154 chr3L 16808019 intron nudC + chr3L 16808096 intron nudC + chr3L 16808173 intron nudC + chr3L_11_16805001 chr3L_16805001 RAL-894 1428 chr3L 16817856 16817899 chr3L 16818016 16818052 8 154 4.5 3.0 3.8 1.7 196 chr3L 16817856 intron,intron nudC +,CG13024 - chr3L 16817954 intron,intron nudC +,CG13024 - chr3L 16818052 intron,intron nudC +,CG13024 - chr3L_8_16815001 chr3L_16815001 RAL-894 1429 chr3L 16845004 16845045 chr3L 16845137 16845178 9 130 2.0 2.5 2.2 2.8 174 chr3L 16845004 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845091 intergenic CG9669 -,CG9715 + chr3L 16845178 intergenic CG9669 -,CG9715 + chr3L_9_16845001 chr3L_16845001 RAL-894 1430 chr3L 16861028 16861054 chr3L 16861130 16861176 11 115 3.0 4.5 3.8 2.3 148 chr3L 16861028 intron,exon Rh4 -,CG13029 + chr3L 16861102 intron,intron Rh4 -,CG13029 + chr3L 16861176 intron,exon Rh4 -,CG13029 + chr3L_11_16860001 chr3L_16860001 RAL-894 1431 chr3L 16866191 16866207 chr3L 16866302 16866318 6 111 3.5 1.0 2.2 1.9 127 chr3L 16866191 intron Lmpt + chr3L 16866254 intron Lmpt + chr3L 16866318 intron Lmpt + chr3L_6_16865001 chr3L_16865001 RAL-894 1432 chr3L 16941381 16941403 chr3L 16941502 16941522 5 121 1.0 0.0 0.5 3.3 141 chr3L 16941381 intron Cpr73D - chr3L 16941452 intron Cpr73D - chr3L 16941522 intron Cpr73D - chr3L_5_16940001 chr3L_16940001 RAL-894 1433 chr3L 16945714 16945749 chr3L 16954887 16954901 roo 10 9156 4.0 2.5 3.2 2.4 9187 chr3L 16945714 exon Obp73a + chr3L 16950308 intergenic not near genes chr3L 16954901 5` UTR Nc73EF + chr3L_10_16950001 chr3L_16950001 RAL-894 1434 chr3L 16973384 16973398 chr3L 23583083 23583103 4 6609704 4.5 12.0 8.2 0.4 6609719 chr3L 16973384 intron Exn + chr3L 20278244 exon gogo - chr3L 23583103 intron AGO3 + chr3L_4_20275001 chr3L_20275001 RAL-894 1435 chr3L 17026792 17026809 chr3L 17026873 17026906 8 88 3.5 4.0 3.8 1.7 114 chr3L 17026792 exon Fit2 + chr3L 17026849 3` UTR Fit2 + chr3L 17026906 3` UTR Fit2 + chr3L_8_17025001 chr3L_17025001 RAL-894 1436 chr3L 17027146 17027182 chr3L 17027258 17027278 11 110 2.5 1.0 1.8 3.9 132 chr3L 17027146 intergenic Fit2 +,CG7730 + chr3L 17027212 intergenic Fit2 +,CG7730 + chr3L 17027278 intergenic Fit2 +,CG7730 + chr3L_11_17025001 chr3L_17025001 RAL-894 1437 chr3L 17034921 17034965 chr3L 17035123 17035173 G2 8 207 4.0 4.5 4.2 1.5 252 chr3L 17034921 intergenic not near genes chr3L 17035047 intergenic not near genes chr3L 17035173 intergenic beg + chr3L_8_17035001 chr3L_17035001 RAL-894 1438 chr3L 17084984 17085028 chr3L 17094153 17094196 roo 15 9166 5.0 5.0 5.0 2.5 9212 chr3L 17084984 intron Rbp6 - chr3L 17089590 intron Rbp6 - chr3L 17094196 intron Rbp6 - chr3L_15_17085001 chr3L_17085001 RAL-894 1439 chr3L 17109634 17109673 chr3L 17110134 17110142 8 495 4.5 1.5 3.0 2.0 508 chr3L 17109634 intron Rbp6 - chr3L 17109888 intron Rbp6 - chr3L 17110142 intron Rbp6 - chr3L_8_17105001 chr3L_17105001 RAL-894 1440 chr3L 17120633 17120683 chr3L 17120729 17120779 13 96 1.0 2.5 1.8 4.6 146 chr3L 17120633 intron Rbp6 - chr3L 17120706 intron Rbp6 - chr3L 17120779 intron Rbp6 - chr3L_13_17120001 chr3L_17120001 RAL-894 1441 chr3L 17408897 17408928 chr3L 17408993 17409024 8 96 4.5 4.0 4.2 1.5 127 chr3L 17408897 intron blot - chr3L 17408960 intron blot - chr3L 17409024 intron blot - chr3L_8_17405001 chr3L_17405001 RAL-894 1442 chr3L 17592792 17592817 chr3L 17592897 17592928 9 104 0.0 7.5 3.8 1.9 136 chr3L 17592792 intron Eip74EF - chr3L 17592860 intron Eip74EF - chr3L 17592928 intron Eip74EF - chr3L_9_17590001 chr3L_17590001 RAL-894 1443 chr3L 17688594 17688629 chr3L 17688765 17688767 4 170 1.0 1.5 1.2 1.8 173 chr3L 17688594 intergenic not near genes chr3L 17688680 intergenic not near genes chr3L 17688767 intergenic not near genes chr3L_4_17685001 chr3L_17685001 RAL-894 1444 chr3L 17730831 17730880 chr3L 17738180 17738230 mdg1 7 7350 3.5 2.0 2.8 1.8 7399 chr3L 17730831 intron Ccn + chr3L 17734530 intron Ccn + chr3L 17738230 intron Ccn + chr3L_7_17730001 chr3L_17730001 RAL-894 1445 chr3L 17743973 17744024 chr3L 17745762 17745813 16 1781 21.0 10.0 15.5 1.0 1840 chr3L 17743973 intron Ccn + chr3L 17744893 intron Ccn + chr3L 17745813 intron,exon Ccn +,CG6034 - chr3L_16_17740001 chr3L_17740001 RAL-894 1446 chr3L 17787672 17787692 chr3L 17787784 17787805 6 111 5.0 8.0 6.5 0.8 133 chr3L 17787672 intergenic not near genes chr3L 17787738 intergenic not near genes chr3L 17787805 intergenic not near genes chr3L_6_17785001 chr3L_17785001 RAL-894 1447 chr3L 17789827 17789870 chr3L 17789923 17789966 13 95 2.0 4.5 3.2 3.1 139 chr3L 17789827 intergenic not near genes chr3L 17789896 intergenic not near genes chr3L 17789966 intergenic not near genes chr3L_13_17785001 chr3L_17785001 RAL-894 1448 chr3L 17790600 17790636 chr3L 17790885 17790917 4 284 1.0 4.0 2.5 1.1 317 chr3L 17790600 intergenic CG42815 - chr3L 17790758 intergenic CG42815 - chr3L 17790917 intergenic CG42815 - chr3L_4_17790001 chr3L_17790001 RAL-894 1449 chr3L 17799794 17799830 chr3L 17801601 17801635 S-element 12 1807 6.0 8.5 7.2 1.5 1841 chr3L 17799794 intron NUCB1 - chr3L 17800714 intron NUCB1 - chr3L 17801635 intron NUCB1 - chr3L_12_17800001 chr3L_17800001 RAL-894 1450 chr3L 17834308 17834355 chr3L 17834492 17834538 10 181 0.5 4.5 2.5 2.9 230 chr3L 17834308 intron Grd + chr3L 17834423 intron Grd + chr3L 17834538 intron Grd + chr3L_10_17830001 chr3L_17830001 RAL-894 1451 chr3L 17918367 17918401 chr3L 17921190 17921213 opus 4 2820 1.5 5.0 3.2 1.0 2846 chr3L 17918367 intergenic not near genes chr3L 17919790 intergenic not near genes chr3L 17921213 intergenic not near genes chr3L_4_17915001 chr3L_17915001 RAL-894 1452 chr3L 17991559 17991589 chr3L 17991657 17991687 9 97 8.5 7.0 7.8 1.0 128 chr3L 17991559 intron Eip75B - chr3L 17991623 intron Eip75B - chr3L 17991687 intron Eip75B - chr3L_9_17990001 chr3L_17990001 RAL-894 1453 chr3L 18000654 18000701 chr3L 18000751 18000797 13 95 4.0 4.0 4.0 2.6 143 chr3L 18000654 intron Eip75B - chr3L 18000726 intron Eip75B - chr3L 18000797 intron Eip75B - chr3L_13_18000001 chr3L_18000001 RAL-894 1454 chr3L 18009927 18009973 chr3L 18010432 18010478 11 503 3.5 3.0 3.2 2.6 551 chr3L 18009927 intron Eip75B - chr3L 18010202 intron Eip75B - chr3L 18010478 intron Eip75B - chr3L_11_18010001 chr3L_18010001 RAL-894 1455 chr3L 18047688 18047737 chr3L 18056765 18056814 roo 13 9075 2.5 2.0 2.2 4.1 9126 chr3L 18047688 intron Eip75B - chr3L 18052251 intron Eip75B - chr3L 18056814 intron Eip75B - chr3L_13_18050001 chr3L_18050001 RAL-894 1456 chr3L 18106246 18106265 chr3L 18106373 18106404 4 136 3.5 0.0 1.8 1.4 158 chr3L 18106246 intergenic CG13698 -,mRpS26 + chr3L 18106325 intergenic CG13698 -,mRpS26 + chr3L 18106404 intergenic mRpS26 +,CG13698 - chr3L_4_18105001 chr3L_18105001 RAL-894 1457 chr3L 18172671 18172704 chr3L 18172767 18172800 13 94 5.5 4.0 4.8 2.2 129 chr3L 18172671 intron W - chr3L 18172736 intron W - chr3L 18172800 intron W - chr3L_13_18170001 chr3L_18170001 RAL-894 1458 chr3L 18198930 18198931 chr3L 24821492 24821494 6 6622563 0.0 8.5 4.2 1.2 6622564 chr3L 18198930 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_6_21510001 chr3L_21510001 RAL-894 1459 chr3L 18258840 18258880 chr3L 18258986 18259017 13 144 3.0 2.5 2.8 3.4 177 chr3L 18258840 intergenic not near genes chr3L 18258928 intergenic not near genes chr3L 18259017 intergenic not near genes chr3L_13_18255001 chr3L_18255001 RAL-894 1460 chr3L 18262451 18262487 chr3L 18262554 18262590 12 101 6.5 4.0 5.2 1.9 139 chr3L 18262451 intergenic not near genes chr3L 18262520 intergenic not near genes chr3L 18262590 intergenic not near genes chr3L_12_18260001 chr3L_18260001 RAL-894 1461 chr3L 18301331 18301380 chr3L 18301440 18301489 10 108 1.0 3.5 2.2 3.1 158 chr3L 18301331 intergenic CG13700 - chr3L 18301410 intergenic CG13700 - chr3L 18301489 intergenic CG13700 - chr3L_10_18300001 chr3L_18300001 RAL-894 1462 chr3L 18376065 18376096 chr3L 18376174 18376199 8 106 2.0 0.5 1.2 3.6 134 chr3L 18376065 intergenic not near genes chr3L 18376132 intergenic not near genes chr3L 18376199 intergenic not near genes chr3L_8_18375001 chr3L_18375001 RAL-894 1463 chr3L 18406118 18406153 chr3L 18406212 18406249 6 93 0.0 3.5 1.8 2.1 131 chr3L 18406118 intergenic not near genes chr3L 18406184 intergenic not near genes chr3L 18406249 intergenic not near genes chr3L_6_18405001 chr3L_18405001 RAL-894 1464 chr3L 18408711 18408758 chr3L 18408817 18408864 16 103 4.5 3.0 3.8 3.3 153 chr3L 18408711 intergenic not near genes chr3L 18408788 intergenic not near genes chr3L 18408864 intergenic not near genes chr3L_16_18405001 chr3L_18405001 RAL-894 1465 chr3L 18420094 18420098 chr3L 18420159 18420168 4 85 1.0 4.5 2.8 1.1 74 chr3L 18420094 intergenic not near genes chr3L 18420131 intergenic not near genes chr3L 18420168 intergenic not near genes chr3L_4_18420001 chr3L_18420001 RAL-894 1466 chr3L 18436046 18436093 chr3L 18436164 18436211 13 117 0.5 5.5 3.0 3.2 165 chr3L 18436046 intergenic not near genes chr3L 18436128 intergenic not near genes chr3L 18436211 intergenic not near genes chr3L_13_18435001 chr3L_18435001 RAL-894 1467 chr3L 18445238 18445273 chr3L 18445327 18445355 8 95 4.5 1.0 2.8 2.1 117 chr3L 18445238 intergenic not near genes chr3L 18445296 intergenic not near genes chr3L 18445355 intergenic not near genes chr3L_8_18445001 chr3L_18445001 RAL-894 1468 chr3L 18448599 18448621 chr3L 18448711 18448733 9 111 9.0 5.5 7.2 1.1 134 chr3L 18448599 intergenic not near genes chr3L 18448666 intergenic not near genes chr3L 18448733 intergenic not near genes chr3L_9_18445001 chr3L_18445001 RAL-894 1469 chr3L 18456286 18456298 chr3L 18456381 18456406 5 104 2.0 4.0 3.0 1.2 120 chr3L 18456286 intergenic CR44670 - chr3L 18456346 intergenic CR44670 - chr3L 18456406 3` UTR CR44670 - chr3L_5_18455001 chr3L_18455001 RAL-894 1470 chr3L 18506126 18506152 chr3L 18509619 18509645 F-element 10 3490 2.5 4.5 3.5 2.2 3519 chr3L 18506126 intergenic not near genes chr3L 18507886 intergenic not near genes chr3L 18509645 intergenic not near genes chr3L_10_18505001 chr3L_18505001 RAL-894 1471 chr3L 18514883 18514905 chr3L 18520097 18520114 BS 6 5212 6.5 4.5 5.5 0.9 5231 chr3L 18514883 intergenic not near genes chr3L 18517498 intergenic not near genes chr3L 18520114 intergenic not near genes chr3L_6_18515001 chr3L_18515001 RAL-894 1472 chr3L 18514906 18514936 chr3L 18520096 18520112 BS 6 5191 3.0 4.5 3.8 1.2 5206 chr3L 18514906 intergenic not near genes chr3L 18517509 intergenic not near genes chr3L 18520112 intergenic not near genes chr3L_6_18515001 chr3L_18515001 RAL-894 1473 chr3L 18528617 18528658 chr3L 18537798 18537839 roo 11 9179 3.5 5.5 4.5 2.0 9222 chr3L 18528617 intergenic not near genes chr3L 18533228 intergenic not near genes chr3L 18537839 intergenic not near genes chr3L_11_18530001 chr3L_18530001 RAL-894 1474 chr3L 18581337 18581365 chr3L 18581433 18581461 6 96 0.0 6.0 3.0 1.5 124 chr3L 18581337 intergenic not near genes chr3L 18581399 intergenic not near genes chr3L 18581461 intergenic not near genes chr3L_6_18580001 chr3L_18580001 RAL-894 1475 chr3L 18593928 18593980 chr3L 18595928 18595949 Doc 13 1994 2.0 1.0 1.5 5.2 2021 chr3L 18593928 intergenic term - chr3L 18594938 intergenic not near genes chr3L 18595949 intergenic CR45389 + chr3L_13_18590001 chr3L_18590001 RAL-894 1476 chr3L 18634611 18634659 chr3L 18634715 18634763 23 101 3.0 3.0 3.0 5.8 152 chr3L 18634611 intron MYPT-75D + chr3L 18634687 intron MYPT-75D + chr3L 18634763 intron MYPT-75D + chr3L_23_18630001 chr3L_18630001 RAL-894 1477 chr3L 18649636 18649657 chr3L 18650007 18650040 9 378 4.0 2.5 3.2 2.1 404 chr3L 18649636 intron MYPT-75D + chr3L 18649838 intron MYPT-75D + chr3L 18650040 intron MYPT-75D + chr3L_9_18645001 chr3L_18645001 RAL-894 1478 chr3L 18710775 18710792 chr3L 18718745 18718761 Stalker2 10 7969 2.0 2.5 2.2 3.1 7986 chr3L 18710775 intergenic not near genes chr3L 18714768 intergenic not near genes chr3L 18718761 intergenic not near genes chr3L_10_18710001 chr3L_18710001 RAL-894 1479 chr3L 18721767 18721801 chr3L 18721865 18721912 10 106 0.5 3.5 2.0 3.3 145 chr3L 18721767 intergenic CG12477 - chr3L 18721840 intergenic CG12477 - chr3L 18721912 3` UTR CG12477 - chr3L_10_18720001 chr3L_18720001 RAL-894 1480 chr3L 18736035 18736061 chr3L 18736150 18736176 8 115 4.0 5.0 4.5 1.5 141 chr3L 18736035 intergenic not near genes chr3L 18736106 intergenic not near genes chr3L 18736176 intergenic not near genes chr3L_8_18735001 chr3L_18735001 RAL-894 1481 chr3L 18753532 18753551 chr3L 18753634 18753653 16 101 3.0 4.0 3.5 3.6 121 chr3L 18753532 intron ftz-f1 - chr3L 18753592 intron ftz-f1 - chr3L 18753653 intron ftz-f1 - chr3L_16_18750001 chr3L_18750001 RAL-894 1482 chr3L 18772394 18772400 chr3L 18781095 18781101 roo 7 8701 11.0 1.0 6.0 1.0 8707 chr3L 18772394 intron ftz-f1 - chr3L 18776748 intron ftz-f1 - chr3L 18781101 intron ftz-f1 - chr3L_7_18775001 chr3L_18775001 RAL-894 1483 chr3L 18772408 18772439 chr3L 18781092 18781121 roo 11 8689 4.5 1.0 2.8 2.9 8713 chr3L 18772408 intron ftz-f1 - chr3L 18776764 intron ftz-f1 - chr3L 18781121 intron ftz-f1 - chr3L_11_18775001 chr3L_18775001 RAL-894 1484 chr3L 18810130 18810173 chr3L 18810227 18810270 16 95 4.5 4.0 4.2 3.1 140 chr3L 18810130 intron CG14073 - chr3L 18810200 intron CG14073 - chr3L 18810270 intron CG14073 - chr3L_16_18810001 chr3L_18810001 RAL-894 1485 chr3L 18833768 18833814 chr3L 18834941 18834967 1360 10 1174 2.5 4.5 3.5 2.2 1199 chr3L 18833768 intron Indy - chr3L 18834368 intron Indy - chr3L 18834967 intron Indy - chr3L_10_18830001 chr3L_18830001 RAL-894 1486 chr3L 18836353 18836408 chr3L 18836457 18836511 15 100 5.0 3.5 4.2 2.9 158 chr3L 18836353 intron Indy - chr3L 18836432 intron Indy - chr3L 18836511 intron Indy - chr3L_15_18835001 chr3L_18835001 RAL-894 1487 chr3L 18839725 18839764 chr3L 18839818 18839865 13 100 6.0 2.5 4.2 2.5 140 chr3L 18839725 intron Indy - chr3L 18839795 intron Indy - chr3L 18839865 intron Indy - chr3L_13_18835001 chr3L_18835001 RAL-894 1488 chr3L 18843861 18843876 chr3L 18843966 18843993 14 114 8.0 3.5 5.8 2.1 132 chr3L 18843861 intron Indy - chr3L 18843927 intron Indy - chr3L 18843993 intron Indy - chr3L_14_18840001 chr3L_18840001 RAL-894 1489 chr3L 18861746 18861796 chr3L 18861859 18861888 9 102 4.5 3.5 4.0 1.8 142 chr3L 18861746 intergenic not near genes chr3L 18861817 intergenic not near genes chr3L 18861888 intergenic not near genes chr3L_9_18860001 chr3L_18860001 RAL-894 1490 chr3L 18885968 18886014 chr3L 18886064 18886110 8 95 0.5 4.5 2.5 2.3 142 chr3L 18885968 intron CG3961 - chr3L 18886039 intron CG3961 - chr3L 18886110 intron CG3961 - chr3L_8_18885001 chr3L_18885001 RAL-894 1491 chr3L 18888421 18888468 chr3L 18888523 18888570 9 99 6.0 4.0 5.0 1.5 149 chr3L 18888421 intron CG3961 - chr3L 18888496 intron CG3961 - chr3L 18888570 intron CG3961 - chr3L_9_18885001 chr3L_18885001 RAL-894 1492 chr3L 18895683 18895706 chr3L 18895791 18895814 7 107 8.0 4.0 6.0 1.0 131 chr3L 18895683 intron CG3902 - chr3L 18895748 intron CG3902 - chr3L 18895814 intron CG3902 - chr3L_7_18895001 chr3L_18895001 RAL-894 1493 chr3L 18933615 18933652 chr3L 18933729 18933731 6 106 3.5 3.5 3.5 1.3 116 chr3L 18933615 intron CG32204 - chr3L 18933673 intron CG32204 - chr3L 18933731 intron CG32204 - chr3L_6_18930001 chr3L_18930001 RAL-894 1494 chr3L 18935815 18935854 chr3L 18935924 18935963 14 109 5.0 4.5 4.8 2.4 148 chr3L 18935815 intron CG32204 - chr3L 18935889 intron CG32204 - chr3L 18935963 intron CG32204 - chr3L_14_18935001 chr3L_18935001 RAL-894 1495 chr3L 18972382 18972423 chr3L 18972463 18972518 9 80 4.5 3.0 3.8 1.9 136 chr3L 18972382 intergenic not near genes chr3L 18972450 intergenic not near genes chr3L 18972518 intergenic not near genes chr3L_9_18970001 chr3L_18970001 RAL-894 1496 chr3L 19008818 19008865 chr3L 19009177 19009223 jockey 6 358 1.5 2.0 1.8 2.1 405 chr3L 19008818 intron nkd - chr3L 19009020 intron nkd - chr3L 19009223 intron nkd - chr3L_6_19005001 chr3L_19005001 RAL-894 1497 chr3L 19015163 19015215 chr3L 19015267 19015314 5 101 0.0 2.5 1.2 2.3 151 chr3L 19015163 intron nkd - chr3L 19015238 intron nkd - chr3L 19015314 intron nkd - chr3L_5_19015001 chr3L_19015001 RAL-894 1498 chr3L 19025924 19025969 chr3L 19026028 19026069 9 100 2.0 1.0 1.5 3.6 145 chr3L 19025924 intron nkd - chr3L 19025996 intron nkd - chr3L 19026069 intron nkd - chr3L_9_19025001 chr3L_19025001 RAL-894 1499 chr3L 19117025 19117075 chr3L 19124492 19124541 mdg1 8 7460 9.0 1.5 5.2 1.3 7516 chr3L 19117025 intron CG14082 - chr3L 19120783 intron CG14082 - chr3L 19124541 intron CG14082 - chr3L_8_19120001 chr3L_19120001 RAL-894 1500 chr3L 19127357 19127396 chr3L 19127443 19127492 13 80 4.0 2.5 3.2 3.1 135 chr3L 19127357 intron CG14082 - chr3L 19127424 intron CG14082 - chr3L 19127492 intron CG14082 - chr3L_13_19125001 chr3L_19125001 RAL-894 1501 chr3L 19127727 19127761 chr3L 19127817 19127833 4 89 2.0 1.5 1.8 1.4 106 chr3L 19127727 intron CG14082 - chr3L 19127780 intron CG14082 - chr3L 19127833 intron CG14082 - chr3L_4_19125001 chr3L_19125001 RAL-894 1502 chr3L 19138131 19138151 chr3L 19138233 19138265 7 109 0.0 3.0 1.5 2.8 134 chr3L 19138131 intron CG14082 - chr3L 19138198 intron CG14082 - chr3L 19138265 intron CG14082 - chr3L_7_19135001 chr3L_19135001 RAL-894 1503 chr3L 19182375 19182417 chr3L 19182465 19182518 9 98 2.5 2.5 2.5 2.6 143 chr3L 19182375 intron fz2 - chr3L 19182446 intron fz2 - chr3L 19182518 intron fz2 - chr3L_9_19180001 chr3L_19180001 RAL-894 1504 chr3L 19186925 19186971 chr3L 19187041 19187087 16 113 2.5 3.0 2.8 4.2 162 chr3L 19186925 intron fz2 - chr3L 19187006 intron fz2 - chr3L 19187087 intron fz2 - chr3L_16_19185001 chr3L_19185001 RAL-894 1505 chr3L 19208051 19208076 chr3L 19209434 19209465 Doc 6 1386 5.0 2.5 3.8 1.2 1414 chr3L 19208051 intron fz2 - chr3L 19208758 intron fz2 - chr3L 19209465 intron fz2 - chr3L_6_19205001 chr3L_19205001 RAL-894 1506 chr3L 19210108 19210140 chr3L 19210224 19210241 6 110 0.0 2.0 1.0 3.0 133 chr3L 19210108 intron fz2 - chr3L 19210174 intron fz2 - chr3L 19210241 intron fz2 - chr3L_6_19210001 chr3L_19210001 RAL-894 1507 chr3L 19221623 19221733 chr3L 19221687 19221862 13 109 2.5 2.5 2.5 3.7 239 chr3L 19221623 intron fz2 - chr3L 19221742 intron fz2 - chr3L 19221862 intron fz2 - chr3L_13_19220001 chr3L_19220001 RAL-894 1508 chr3L 19222355 19222394 chr3L 19222496 19222513 10 138 6.5 2.0 4.2 1.9 158 chr3L 19222355 intron fz2 - chr3L 19222434 intron fz2 - chr3L 19222513 intron fz2 - chr3L_10_19220001 chr3L_19220001 RAL-894 1509 chr3L 19238712 19238749 chr3L 19238839 19238856 11 124 4.5 7.5 6.0 1.6 144 chr3L 19238712 intergenic not near genes chr3L 19238784 intergenic not near genes chr3L 19238856 intergenic not near genes chr3L_11_19235001 chr3L_19235001 RAL-894 1510 chr3L 19251032 19251078 chr3L 19251151 19251197 13 118 5.0 1.5 3.2 3.1 165 chr3L 19251032 intergenic not near genes chr3L 19251114 intergenic not near genes chr3L 19251197 intergenic not near genes chr3L_13_19250001 chr3L_19250001 RAL-894 1511 chr3L 19262196 19262240 chr3L 19262295 19262342 13 100 1.0 7.5 4.2 2.5 146 chr3L 19262196 3` UTR Bet1 + chr3L 19262269 3` UTR,3` UTR Bet1 +,Max - chr3L 19262342 3` UTR,3` UTR Bet1 +,Max - chr3L_13_19260001 chr3L_19260001 RAL-894 1512 chr3L 19263217 19263242 chr3L 19263398 19263423 9 180 7.0 0.0 3.5 2.0 206 chr3L 19263217 intron Max - chr3L 19263320 intron Max - chr3L 19263423 exon Max - chr3L_9_19260001 chr3L_19260001 RAL-894 1513 chr3L 19295788 19295829 chr3L 19295934 19295975 10 145 4.5 1.5 3.0 2.5 187 chr3L 19295788 intron fal + chr3L 19295882 intron fal + chr3L 19295975 intron fal + chr3L_10_19295001 chr3L_19295001 RAL-894 1514 chr3L 19305092 19305133 chr3L 19305426 19305467 7 336 27.0 34.0 30.5 0.2 375 chr3L 19305092 intron pip - chr3L 19305280 intron pip - chr3L 19305467 intron pip - chr3L_7_19305001 chr3L_19305001 RAL-894 1515 chr3L 19305085 19305130 chr3L 19305469 19305473 5 350 26.0 29.0 27.5 0.2 388 chr3L 19305085 intron pip - chr3L 19305279 intron pip - chr3L 19305473 intron pip - chr3L_5_19305001 chr3L_19305001 RAL-894 1516 chr3L 19316235 19316278 chr3L 19316341 19316368 14 103 6.0 1.0 3.5 3.1 133 chr3L 19316235 intron pip - chr3L 19316302 intron pip - chr3L 19316368 intron pip - chr3L_14_19315001 chr3L_19315001 RAL-894 1517 chr3L 19323608 19323624 chr3L 19323770 19323804 4 176 1.0 2.5 1.8 1.4 196 chr3L 19323608 intron pip - chr3L 19323706 intron pip - chr3L 19323804 intron pip - chr3L_4_19320001 chr3L_19320001 RAL-894 1518 chr3L 19343573 19343625 chr3L 19343733 19343785 10 154 0.0 0.5 0.2 8.3 212 chr3L 19343573 exon CG32206 - chr3L 19343679 intron CG32206 - chr3L 19343785 intron CG32206 - chr3L_10_19340001 chr3L_19340001 RAL-894 1519 chr3L 19437018 19437048 chr3L 19437120 19437130 7 97 2.0 6.0 4.0 1.4 112 chr3L 19437018 intergenic not near genes chr3L 19437074 intergenic not near genes chr3L 19437130 intergenic not near genes chr3L_7_19435001 chr3L_19435001 RAL-894 1520 chr3L 19457897 19457914 chr3L 19457990 19458012 6 91 3.0 6.0 4.5 1.1 115 chr3L 19457897 intergenic not near genes chr3L 19457954 intergenic not near genes chr3L 19458012 intergenic not near genes chr3L_6_19455001 chr3L_19455001 RAL-894 1521 chr3L 19457916 19457939 chr3L 19457983 19458037 7 92 1.0 5.0 3.0 1.8 121 chr3L 19457916 intergenic not near genes chr3L 19457976 intergenic not near genes chr3L 19458037 intergenic not near genes chr3L_7_19455001 chr3L_19455001 RAL-894 1522 chr3L 19493204 19493252 chr3L 19493301 19493344 24 95 5.5 3.0 4.2 4.6 140 chr3L 19493204 intron CG9449 - chr3L 19493274 intron CG9449 - chr3L 19493344 intron CG9449 - chr3L_24_19490001 chr3L_19490001 RAL-894 1523 chr3L 19605568 19605577 chr3L 19605676 19605685 5 107 6.5 10.0 8.2 0.5 117 chr3L 19605568 intron lush - chr3L 19605626 intron lush - chr3L 19605685 intron lush - chr3L_5_19605001 chr3L_19605001 RAL-894 1524 chr3L 19792343 19792364 chr3L 19792458 19792479 16 113 6.0 9.5 7.8 1.8 136 chr3L 19792343 intron,intron CG42637 -,Gyc76C - chr3L 19792411 intron,intron CG42637 -,Gyc76C - chr3L 19792479 intron,intron CG42637 -,Gyc76C - chr3L_16_19790001 chr3L_19790001 RAL-894 1525 chr3L 19820279 19820313 chr3L 19827848 19827881 412 12 7568 3.0 3.0 3.0 3.0 7602 chr3L 19820279 intron Deaf1 + chr3L 19824080 intron Deaf1 + chr3L 19827881 intron Deaf1 + chr3L_12_19820001 chr3L_19820001 RAL-894 1526 chr3L 19845720 19845756 chr3L 19845827 19845840 13 102 4.5 3.5 4.0 2.6 120 chr3L 19845720 intron Papss + chr3L 19845780 intron Papss + chr3L 19845840 intron Papss + chr3L_13_19845001 chr3L_19845001 RAL-894 1527 chr3L 19848491 19848500 chr3L 19857697 19857710 roo 4 9209 10.5 2.5 6.5 0.5 9219 chr3L 19848491 intron Papss + chr3L 19853100 intron Papss + chr3L 19857710 intron Papss + chr3L_4_19850001 chr3L_19850001 RAL-894 1528 chr3L 19848501 19848518 chr3L 19857696 19857728 roo 4 9204 8.5 2.5 5.5 0.6 9227 chr3L 19848501 intron Papss + chr3L 19853114 intron Papss + chr3L 19857728 intron Papss + chr3L_4_19850001 chr3L_19850001 RAL-894 1529 chr3L 19857711 19857747 chr3L 19857964 19858001 15 248 3.5 2.0 2.8 3.9 290 chr3L 19857711 intron Papss + chr3L 19857856 intron Papss + chr3L 19858001 intron Papss + chr3L_15_19855001 chr3L_19855001 RAL-894 1530 chr3L 19861805 19861851 chr3L 19863613 19863659 S-element 12 1800 1.5 3.5 2.5 3.4 1854 chr3L 19861805 5` UTR CR45433 + chr3L 19862732 intergenic not near genes chr3L 19863659 intergenic not near genes chr3L_12_19860001 chr3L_19860001 RAL-894 1531 chr3L 19962940 19962978 chr3L 19963028 19963076 9 89 1.0 5.5 3.2 2.1 136 chr3L 19962940 intron Ac76E + chr3L 19963008 intron Ac76E + chr3L 19963076 intron Ac76E + chr3L_9_19960001 chr3L_19960001 RAL-894 1532 chr3L 19981185 19981236 chr3L 19981285 19981336 15 97 4.0 4.5 4.2 2.9 151 chr3L 19981185 intergenic CG17732 + chr3L 19981260 intergenic CG17732 + chr3L 19981336 intergenic CG17732 + chr3L_15_19980001 chr3L_19980001 RAL-894 1533 chr3L 20056257 20056280 chr3L 20056362 20056390 9 109 2.0 2.0 2.0 3.0 133 chr3L 20056257 intergenic not near genes chr3L 20056324 intergenic not near genes chr3L 20056390 intergenic not near genes chr3L_9_20055001 chr3L_20055001 RAL-894 1534 chr3L 20076816 20076862 chr3L 20076973 20077019 12 153 4.0 5.0 4.5 2.2 203 chr3L 20076816 intron sNPF-R - chr3L 20076918 intron sNPF-R - chr3L 20077019 intron sNPF-R - chr3L_12_20075001 chr3L_20075001 RAL-894 1535 chr3L 20096253 20096269 chr3L 20096371 20096397 5 126 6.0 4.0 5.0 0.8 144 chr3L 20096253 intergenic not near genes chr3L 20096325 intergenic not near genes chr3L 20096397 intergenic not near genes chr3L_5_20095001 chr3L_20095001 RAL-894 1536 chr3L 20113653 20113660 chr3L 20122930 20122937 roo 6 9277 9.5 8.5 9.0 0.6 9284 chr3L 20113653 intergenic not near genes chr3L 20118295 intergenic not near genes chr3L 20122937 intergenic not near genes chr3L_6_20115001 chr3L_20115001 RAL-894 1537 chr3L 20113670 20113678 chr3L 20122919 20122952 roo 4 9262 6.0 4.5 5.2 0.6 9282 chr3L 20113670 intergenic not near genes chr3L 20118311 intergenic not near genes chr3L 20122952 intergenic not near genes chr3L_4_20115001 chr3L_20115001 RAL-894 1538 chr3L 20143073 20143076 chr3L 20143173 20143176 4 100 4.0 5.5 4.8 0.7 103 chr3L 20143073 intergenic not near genes chr3L 20143124 intergenic not near genes chr3L 20143176 intergenic not near genes chr3L_4_20140001 chr3L_20140001 RAL-894 1539 chr3L 20143077 20143102 chr3L 20143165 20143199 10 97 2.0 5.5 3.8 2.1 122 chr3L 20143077 intergenic not near genes chr3L 20143138 intergenic not near genes chr3L 20143199 intergenic not near genes chr3L_10_20140001 chr3L_20140001 RAL-894 1540 chr3L 20148263 20148315 chr3L 20148373 20148389 12 101 3.0 4.5 3.8 2.5 126 chr3L 20148263 intergenic not near genes chr3L 20148326 intergenic not near genes chr3L 20148389 intergenic not near genes chr3L_12_20145001 chr3L_20145001 RAL-894 1541 chr3L 20156160 20156193 chr3L 20156287 20156321 9 128 1.0 1.0 1.0 4.5 161 chr3L 20156160 intron CG42674 - chr3L 20156240 intron CG42674 - chr3L 20156321 intron CG42674 - chr3L_9_20155001 chr3L_20155001 RAL-894 1542 chr3L 20187443 20187485 chr3L 20187541 20187584 5 99 25.5 26.0 25.8 0.2 141 chr3L 20187443 intron CG42674 - chr3L 20187514 intron CG42674 - chr3L 20187584 intron CG42674 - chr3L_5_20185001 chr3L_20185001 RAL-894 1543 chr3L 20257317 20257361 chr3L 20258457 20258501 pogo 11 1139 0.5 4.0 2.2 3.4 1184 chr3L 20257317 intron rdgC + chr3L 20257909 intron rdgC + chr3L 20258501 intron rdgC + chr3L_11_20255001 chr3L_20255001 RAL-894 1544 chr3L 20283680 20283699 chr3L 20283761 20283793 7 92 2.0 4.5 3.2 1.7 113 chr3L 20283680 intron gogo - chr3L 20283736 intron gogo - chr3L 20283793 intron gogo - chr3L_7_20280001 chr3L_20280001 RAL-894 1545 chr3L 20345585 20345636 chr3L 20345686 20345717 16 97 4.5 5.0 4.8 2.8 132 chr3L 20345585 intergenic Rbbp5 - chr3L 20345651 intergenic Rbbp5 - chr3L 20345717 intergenic Rbbp5 - chr3L_16_20345001 chr3L_20345001 RAL-894 1546 chr3L 20386926 20386972 chr3L 20387048 20387094 9 122 2.5 4.5 3.5 2.0 168 chr3L 20386926 intron fbl + chr3L 20387010 intron fbl + chr3L 20387094 intron fbl + chr3L_9_20385001 chr3L_20385001 RAL-894 1547 chr3L 20462573 20462603 chr3L 20462673 20462704 8 100 3.0 5.5 4.2 1.5 131 chr3L 20462573 intron atk - chr3L 20462638 intron atk - chr3L 20462704 intron atk - chr3L_8_20460001 chr3L_20460001 RAL-894 1548 chr3L 20476736 20476771 chr3L 20484355 20484390 springer 9 7618 9.0 4.5 6.8 1.2 7654 chr3L 20476736 3` UTR isoQC + chr3L 20480563 intergenic not near genes chr3L 20484390 3` UTR ZnT77C - chr3L_9_20480001 chr3L_20480001 RAL-894 1549 chr3L 20487644 20487662 chr3L 20488115 20488132 INE-1 8 471 7.0 0.0 3.5 1.8 488 chr3L 20487644 intron ZnT77C - chr3L 20487888 intron ZnT77C - chr3L 20488132 exon ZnT77C - chr3L_8_20485001 chr3L_20485001 RAL-894 1550 chr3L 20525229 20525229 chr3L 24821493 24821494 4 4296264 12.5 8.5 10.5 0.3 4296265 chr3L 20525229 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_4_22670001 chr3L_22670001 RAL-894 1551 chr3L 20710745 20710792 chr3L 20710841 20710869 12 93 8.0 1.5 4.8 2.1 124 chr3L 20710745 intergenic not near genes chr3L 20710807 intergenic not near genes chr3L 20710869 intergenic not near genes chr3L_12_20710001 chr3L_20710001 RAL-894 1552 chr3L 20717904 20717954 chr3L 20718007 20718057 17 103 6.5 6.5 6.5 2.3 153 chr3L 20717904 intron cmpy - chr3L 20717980 intron cmpy - chr3L 20718057 intron cmpy - chr3L_17_20715001 chr3L_20715001 RAL-894 1553 chr3L 20858058 20858103 chr3L 20858176 20858222 16 118 6.5 5.0 5.8 2.4 164 chr3L 20858058 intron CG32432 - chr3L 20858140 intron CG32432 - chr3L 20858222 intron CG32432 - chr3L_16_20855001 chr3L_20855001 RAL-894 1554 chr3L 20881353 20881404 chr3L 20881608 20881659 17 250 4.5 4.5 4.5 3.1 306 chr3L 20881353 intron CG32432 - chr3L 20881506 intron CG32432 - chr3L 20881659 5` UTR CG32432 - chr3L_17_20880001 chr3L_20880001 RAL-894 1555 chr3L 20883758 20883797 chr3L 20883904 20883930 5 140 1.0 4.5 2.8 1.3 172 chr3L 20883758 intron CG32432 - chr3L 20883844 intron CG32432 - chr3L 20883930 intron CG32432 - chr3L_5_20880001 chr3L_20880001 RAL-894 1556 chr3L 21014928 21014941 chr3L 21023399 21023402 Tirant 4 8464 1.5 3.0 2.2 1.2 8474 chr3L 21014928 intron skd - chr3L 21019165 intron skd - chr3L 21023402 intron skd - chr3L_4_21015001 chr3L_21015001 RAL-894 1557 chr3L 21082192 21082238 chr3L 21082290 21082335 14 95 5.5 5.5 5.5 2.2 143 chr3L 21082192 intron ko - chr3L 21082264 intron ko - chr3L 21082335 intron ko - chr3L_14_21080001 chr3L_21080001 RAL-894 1558 chr3L 21151870 21151895 chr3L 21156957 21156999 flea 12 5101 3.0 4.0 3.5 2.7 5129 chr3L 21151870 intron Ac78C - chr3L 21154434 intron Ac78C - chr3L 21156999 intron Ac78C - chr3L_12_21150001 chr3L_21150001 RAL-894 1559 chr3L 21199440 21199493 chr3L 21199590 21199630 7 138 3.0 5.0 4.0 1.4 190 chr3L 21199440 intron,intron CG33054 -,CG33056 - chr3L 21199535 intron,intron CG33054 -,CG33056 - chr3L 21199630 intron,intron CG33054 -,CG33056 - chr3L_7_21195001 chr3L_21195001 RAL-894 1560 chr3L 21243745 21243777 chr3L 21251309 21251315 412 7 7559 1.0 1.0 1.0 3.5 7570 chr3L 21243745 intron Eip78C + chr3L 21247530 intron Eip78C + chr3L 21251315 intron Eip78C + chr3L_7_21245001 chr3L_21245001 RAL-894 1561 chr3L 21306128 21306177 chr3L 21315307 21315330 roo 24 9175 3.0 6.0 4.5 4.4 9202 chr3L 21306128 3` UTR CG7632 + chr3L 21310729 intron Pc - chr3L 21315330 3` UTR Pc - chr3L_24_21310001 chr3L_21310001 RAL-894 1562 chr3L 21319528 21319553 chr3L 21319624 21319663 8 107 4.0 2.5 3.2 1.9 135 chr3L 21319528 5` UTR Rab26 + chr3L 21319596 5` UTR Rab26 + chr3L 21319663 5` UTR Rab26 + chr3L_8_21315001 chr3L_21315001 RAL-894 1563 chr3L 21393634 21393656 chr3L 21393722 21393765 8 103 3.5 4.0 3.8 1.7 131 chr3L 21393634 intron rgn + chr3L 21393700 intron rgn + chr3L 21393765 intron rgn + chr3L_8_21390001 chr3L_21390001 RAL-894 1564 chr3L 21405716 21405740 chr3L 21405837 21405843 7 114 1.5 6.0 3.8 1.5 127 chr3L 21405716 intron,intron rgn +,sa - chr3L 21405780 intron,intron rgn +,sa - chr3L 21405843 intron,intron rgn +,sa - chr3L_7_21405001 chr3L_21405001 RAL-894 1565 chr3L 21415139 21415158 chr3L 21415232 21415261 12 100 1.5 5.5 3.5 2.7 122 chr3L 21415139 intron rgn + chr3L 21415200 intron rgn + chr3L 21415261 intron rgn + chr3L_12_21415001 chr3L_21415001 RAL-894 1566 chr3L 21438306 21438360 chr3L 21438439 21438465 15 120 4.0 6.0 5.0 2.5 159 chr3L 21438306 3` UTR Aef1 + chr3L 21438386 3` UTR Aef1 + chr3L 21438465 3` UTR Aef1 + chr3L_15_21435001 chr3L_21435001 RAL-894 1567 chr3L 21564152 21564194 chr3L 21564277 21564324 16 124 4.0 4.5 4.2 3.1 172 chr3L 21564152 intergenic not near genes chr3L 21564238 intergenic not near genes chr3L 21564324 intergenic not near genes chr3L_16_21560001 chr3L_21560001 RAL-894 1568 chr3L 21639179 21639204 chr3L 21639278 21639293 7 94 8.5 4.0 6.2 1.0 114 chr3L 21639179 intergenic CG32444 +,CG32445 + chr3L 21639236 intergenic CG32445 +,CG32444 + chr3L 21639293 intergenic CG32445 +,CG32444 + chr3L_7_21635001 chr3L_21635001 RAL-894 1569 chr3L 21656978 21657027 chr3L 21657088 21657122 8 102 3.0 1.0 2.0 2.7 144 chr3L 21656978 intron CG43980 + chr3L 21657050 intron CG43980 + chr3L 21657122 intron CG43980 + chr3L_8_21655001 chr3L_21655001 RAL-894 1570 chr3L 21767032 21767065 chr3L 21767133 21767166 13 100 1.5 5.0 3.2 3.1 134 chr3L 21767032 intron Syn1 - chr3L 21767099 intron Syn1 - chr3L 21767166 intron Syn1 - chr3L_13_21765001 chr3L_21765001 RAL-894 1571 chr3L 21787606 21787633 chr3L 21787694 21787721 8 94 3.0 1.0 2.0 2.7 115 chr3L 21787606 intergenic not near genes chr3L 21787664 intergenic not near genes chr3L 21787721 intergenic not near genes chr3L_8_21785001 chr3L_21785001 RAL-894 1572 chr3L 21799921 21799962 chr3L 21800024 21800059 16 101 5.0 1.0 3.0 4.0 138 chr3L 21799921 intergenic not near genes chr3L 21799990 intergenic not near genes chr3L 21800059 intergenic not near genes chr3L_16_21795001 chr3L_21795001 RAL-894 1573 chr3L 21836709 21836762 chr3L 21836810 21836868 11 97 1.5 2.0 1.8 3.9 159 chr3L 21836709 3` UTR P5CDh1 - chr3L 21836788 3` UTR P5CDh1 - chr3L 21836868 3` UTR P5CDh1 - chr3L_11_21835001 chr3L_21835001 RAL-894 1574 chr3L 21849501 21849532 chr3L 21849585 21849634 8 95 3.0 8.5 5.8 1.2 133 chr3L 21849501 intron mub + chr3L 21849568 intron mub + chr3L 21849634 intron mub + chr3L_8_21845001 chr3L_21845001 RAL-894 1575 chr3L 21905330 21905352 chr3L 21905417 21905450 4 92 4.0 3.5 3.8 0.8 120 chr3L 21905330 intron mub + chr3L 21905390 intron mub + chr3L 21905450 intron mub + chr3L_4_21905001 chr3L_21905001 RAL-894 1576 chr3L 21991106 21991142 chr3L 21991229 21991265 8 122 2.5 2.5 2.5 2.3 159 chr3L 21991106 intergenic not near genes chr3L 21991186 intergenic not near genes chr3L 21991265 intergenic not near genes chr3L_8_21990001 chr3L_21990001 RAL-894 1577 chr3L 21994425 21994471 chr3L 21994521 21994547 21 99 3.5 4.5 4.0 4.2 122 chr3L 21994425 intergenic not near genes chr3L 21994486 intergenic not near genes chr3L 21994547 intergenic not near genes chr3L_21_21990001 chr3L_21990001 RAL-894 1578 chr3L 22010619 22010659 chr3L 22010774 22010813 7 159 2.0 4.0 3.0 1.8 194 chr3L 22010619 intergenic not near genes chr3L 22010716 intergenic not near genes chr3L 22010813 intergenic not near genes chr3L_7_22010001 chr3L_22010001 RAL-894 1579 chr3L 22012337 22012382 chr3L 22012505 22012557 11 174 4.0 4.0 4.0 2.2 220 chr3L 22012337 intergenic not near genes chr3L 22012447 intergenic not near genes chr3L 22012557 intergenic not near genes chr3L_11_22010001 chr3L_22010001 RAL-894 1580 chr3L 22018688 22018733 chr3L 22018786 22018797 6 86 2.0 0.5 1.2 2.7 109 chr3L 22018688 intergenic not near genes chr3L 22018742 intergenic not near genes chr3L 22018797 intergenic not near genes chr3L_6_22015001 chr3L_22015001 RAL-894 1581 chr3L 22023197 22023242 chr3L 22023307 22023354 13 105 5.0 3.0 4.0 2.6 157 chr3L 22023197 intergenic not near genes chr3L 22023276 intergenic not near genes chr3L 22023354 intergenic not near genes chr3L_13_22020001 chr3L_22020001 RAL-894 1582 chr3L 22099665 22099705 chr3L 22105863 22105911 3S18 18 6200 3.5 8.0 5.8 2.6 6246 chr3L 22099665 intergenic not near genes chr3L 22102788 intergenic not near genes chr3L 22105911 intergenic not near genes chr3L_18_22100001 chr3L_22100001 RAL-894 1583 chr3L 22166426 22166475 chr3L 22166524 22166553 4 89 3.5 2.0 2.8 1.1 127 chr3L 22166426 intron olf413 + chr3L 22166490 intron olf413 + chr3L 22166553 intron olf413 + chr3L_4_22165001 chr3L_22165001 RAL-894 1584 chr3L 22447183 22447226 chr3L 22447294 22447337 9 111 3.0 4.5 3.8 1.9 154 chr3L 22447183 intergenic not near genes chr3L 22447260 intergenic not near genes chr3L 22447337 intergenic not near genes chr3L_9_22445001 chr3L_22445001 RAL-894 1585 chr3L 22522680 22522721 chr3L 22522777 22522818 11 94 7.0 2.5 4.8 1.9 138 chr3L 22522680 intergenic not near genes chr3L 22522749 intergenic not near genes chr3L 22522818 intergenic not near genes chr3L_11_22520001 chr3L_22520001 RAL-894 1586 chr3L 22554414 22554452 chr3L 22554500 22554548 8 84 3.0 5.5 4.2 1.5 134 chr3L 22554414 intergenic not near genes chr3L 22554481 intergenic not near genes chr3L 22554548 intergenic not near genes chr3L_8_22550001 chr3L_22550001 RAL-894 1587 chr3L 22555753 22555789 chr3L 22563243 22563269 blood 5 7483 2.0 1.5 1.8 1.8 7516 chr3L 22555753 intergenic not near genes chr3L 22559511 intergenic not near genes chr3L 22563269 intergenic not near genes chr3L_5_22555001 chr3L_22555001 RAL-894 1588 chr3L 22569575 22569601 chr3L 22569676 22569679 6 102 2.0 1.0 1.5 2.4 104 chr3L 22569575 intergenic not near genes chr3L 22569627 intergenic not near genes chr3L 22569679 intergenic not near genes chr3L_6_22565001 chr3L_22565001 RAL-894 1589 chr3L 22570404 22570449 chr3L 22570568 22570612 8 158 4.0 2.0 3.0 2.0 208 chr3L 22570404 intergenic not near genes chr3L 22570508 intergenic not near genes chr3L 22570612 intergenic not near genes chr3L_8_22570001 chr3L_22570001 RAL-894 1590 chr3L 22577633 22577646 chr3L 22582427 22582441 Doc 4 4798 0.5 5.0 2.8 1.1 4808 chr3L 22577633 intergenic not near genes chr3L 22580037 intergenic not near genes chr3L 22582441 3` UTR CG14459 - chr3L_4_22580001 chr3L_22580001 RAL-894 1591 chr3L 22617175 22617216 chr3L 22624647 22624678 blood 14 7468 4.5 3.5 4.0 2.8 7503 chr3L 22617175 intron CG14459 - chr3L 22620926 intron CG14459 - chr3L 22624678 intron CG14459 - chr3L_14_22620001 chr3L_22620001 RAL-894 1592 chr3L 22689094 22689119 chr3L 22689185 22689209 4 93 2.0 5.0 3.5 0.9 115 chr3L 22689094 intergenic not near genes chr3L 22689152 intergenic not near genes chr3L 22689209 intergenic not near genes chr3L_4_22685001 chr3L_22685001 RAL-894 1593 chr3L 22731871 22731881 chr3L 22731971 22731971 5 98 5.0 6.0 5.5 0.8 100 chr3L 22731871 intron CG11367 + chr3L 22731921 intron CG11367 + chr3L 22731971 intron CG11367 + chr3L_5_22730001 chr3L_22730001 RAL-894 1594 chr3L 22761370 22761399 chr3L 22766824 22766852 Ivk 10 5449 4.5 3.5 4.0 2.0 5482 chr3L 22761370 intron SPoCk + chr3L 22764111 intron SPoCk + chr3L 22766852 intron SPoCk + chr3L_10_22760001 chr3L_22760001 RAL-894 1595 chr3L 22761402 22761414 chr3L 22766821 22766868 Ivk 7 5445 2.5 3.0 2.8 1.8 5466 chr3L 22761402 intron SPoCk + chr3L 22764135 intron SPoCk + chr3L 22766868 intron SPoCk + chr3L_7_22760001 chr3L_22760001 RAL-894 1596 chr3L 22853448 22853722 chr3L 22853549 22853828 15 103 0.5 4.5 2.5 4.3 380 chr3L 22853448 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853638 5` UTR CR43426 + chr3L 22853828 5` UTR CR43426 + chr3L_15_22850001 chr3L_22850001 RAL-894 1597 chr3L 22865970 22866012 chr3L 22867123 22867153 Doc 15 1149 4.0 4.0 4.0 3.0 1183 chr3L 22865970 intron CG33170 + chr3L 22866562 intron CG33170 + chr3L 22867153 intron CG33170 + chr3L_15_22865001 chr3L_22865001 RAL-894 1598 chr3L 22908066 22908066 chr3L 24821492 24821494 12 1913427 20.5 8.5 14.5 0.8 1913428 chr3L 22908066 intergenic not near genes chr3L 23864780 intron CG40470 - chr3L 24821494 intergenic not near genes chr3L_12_23860001 chr3L_23860001 RAL-894 1599 chr3L 22909031 22909046 chr3L 22910200 22910221 5 1175 5.5 3.0 4.2 1.0 1190 chr3L 22909031 intergenic CR45661 + chr3L 22909626 5` UTR CR45661 + chr3L 22910221 intergenic CG12768 + chr3L_5_22905001 chr3L_22905001 RAL-894 1600 chr3L 22949181 22949216 chr3L 22949289 22949324 7 106 3.0 3.5 3.2 1.7 143 chr3L 22949181 intron Mes2 + chr3L 22949252 intron Mes2 + chr3L 22949324 intron Mes2 + chr3L_7_22945001 chr3L_22945001 RAL-894 1601 chr3L 22985288 22985320 chr3L 22985391 22985422 7 100 4.0 4.0 4.0 1.4 134 chr3L 22985288 intergenic not near genes chr3L 22985355 intergenic not near genes chr3L 22985422 intergenic not near genes chr3L_7_22985001 chr3L_22985001 RAL-894 1602 chr3L 22989861 22989869 chr3L 22996845 22996846 297 5 6987 3.0 2.0 2.5 1.4 6985 chr3L 22989861 intergenic not near genes chr3L 22993354 intergenic not near genes chr3L 22996846 intergenic not near genes chr3L_5_22990001 chr3L_22990001 RAL-894 1603 chr3L 22989873 22989880 chr3L 22996841 22996874 297 6 6978 3.0 1.5 2.2 1.9 7001 chr3L 22989873 intergenic not near genes chr3L 22993374 intergenic not near genes chr3L 22996874 intergenic not near genes chr3L_6_22990001 chr3L_22990001 RAL-894 1604 chr3L 23218028 23218076 chr3L 23218522 23218570 13 491 1.0 4.5 2.8 3.4 542 chr3L 23218028 intron nAChRalpha4 + chr3L 23218299 intron nAChRalpha4 + chr3L 23218570 intron nAChRalpha4 + chr3L_13_23215001 chr3L_23215001 RAL-894 1605 chr3L 24012398 24012417 chr3L 24020759 24020773 roo 4 8360 4.5 1.5 3.0 1.0 8375 chr3L 24012398 intergenic not near genes chr3L 24016586 intergenic not near genes chr3L 24020773 intergenic not near genes chr3L_4_24015001 chr3L_24015001 RAL-894 1606 chr3L 24012425 24012438 chr3L 24020745 24020785 roo 5 8332 3.0 0.5 1.8 1.8 8360 chr3L 24012425 intergenic not near genes chr3L 24016605 intergenic not near genes chr3L 24020785 intergenic not near genes chr3L_5_24015001 chr3L_24015001 RAL-894 1607 chr3L 24791880 24791916 chr3L 24796674 24796715 Doc 5 4793 2.5 1.5 2.0 1.7 4835 chr3L 24791880 intergenic not near genes chr3L 24794298 intergenic not near genes chr3L 24796715 intergenic not near genes chr3L_5_24790001 chr3L_24790001 RAL-894 1608 chr3L 18198931 18198931 chr3L 24821493 24821493 5 6622562 0.0 8.5 4.2 1.0 6622562 chr3L 18198931 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821493 intergenic not near genes chr3L_5_21510001 chr3L_21510001 RAL-894 1609 chr3R 2998451 2998495 chr3R 2998547 2998591 5 92 3.0 3.5 3.2 1.2 140 chr3R 2998451 intron CG42618 - chr3R 2998521 intron CG42618 - chr3R 2998591 intron CG42618 - chr3R_5_2995001 chr3R_2995001 RAL-894 1610 chr3R 4105025 4105071 chr3R 4110249 4110277 copia 8 5221 4.5 6.5 5.5 1.2 5252 chr3R 4105025 intergenic not near genes chr3R 4107651 intergenic not near genes chr3R 4110277 intergenic not near genes chr3R_8_4105001 chr3R_4105001 RAL-894 1611 chr3R 4132880 4132930 chr3R 4133054 4133098 12 171 0.5 0.5 0.5 8.0 218 chr3R 4132880 intron Gfat1 + chr3R 4132989 intron Gfat1 + chr3R 4133098 intron Gfat1 + chr3R_12_4130001 chr3R_4130001 RAL-894 1612 chr3R 4206049 4206100 chr3R 4211644 4211694 mdg3 8 5589 5.5 1.0 3.2 1.9 5645 chr3R 4206049 intron CG14636 - chr3R 4208872 intron CG14636 - chr3R 4211694 intron CG14636 - chr3R_8_4205001 chr3R_4205001 RAL-894 1613 chr3R 4366740 4366754 chr3R 4375140 4375157 roo 4 8402 12.5 5.0 8.8 0.4 8417 chr3R 4366740 3` UTR CG1090 + chr3R 4370948 intergenic not near genes chr3R 4375157 5` UTR CR44922 + chr3R_4_4370001 chr3R_4370001 RAL-894 1614 chr3R 4366756 4366787 chr3R 4375138 4375160 roo 8 8395 7.0 4.5 5.8 1.2 8404 chr3R 4366756 3` UTR CG1090 + chr3R 4370958 intergenic not near genes chr3R 4375160 5` UTR CR44922 + chr3R_8_4370001 chr3R_4370001 RAL-894 1615 chr3R 4408396 4408416 chr3R 4412720 4412722 Juan 7 4318 11.0 4.0 7.5 0.8 4326 chr3R 4408396 intron CG32944 - chr3R 4410559 intron CG32944 - chr3R 4412722 intron CG32944 - chr3R_7_4410001 chr3R_4410001 RAL-894 1616 chr3R 4408418 4408439 chr3R 4412718 4412763 Juan 7 4313 4.0 3.5 3.8 1.5 4345 chr3R 4408418 intron CG32944 - chr3R 4410590 intron CG32944 - chr3R 4412763 intron CG32944 - chr3R_7_4410001 chr3R_4410001 RAL-894 1617 chr3R 4512379 4512396 chr3R 4512609 4512616 7 229 5.0 0.0 2.5 2.0 237 chr3R 4512379 intron CG34357 - chr3R 4512498 intron CG34357 - chr3R 4512616 intron CG34357 - chr3R_7_4510001 chr3R_4510001 RAL-894 1618 chr3R 4609530 4609582 chr3R 4610714 4610756 1360 18 1177 6.0 7.0 6.5 2.4 1226 chr3R 4609530 intergenic not near genes chr3R 4610143 intergenic not near genes chr3R 4610756 intergenic not near genes chr3R_18_4610001 chr3R_4610001 RAL-894 1619 chr3R 4680689 4680741 chr3R 4680788 4680840 20 96 4.5 5.5 5.0 3.3 151 chr3R 4680689 intron CG43427 + chr3R 4680764 intron CG43427 + chr3R 4680840 intron CG43427 + chr3R_20_4680001 chr3R_4680001 RAL-894 1620 chr3R 4733660 4733703 chr3R 4733804 4733847 11 143 6.0 4.5 5.2 1.8 187 chr3R 4733660 intergenic not near genes chr3R 4733754 intergenic not near genes chr3R 4733847 intergenic not near genes chr3R_11_4730001 chr3R_4730001 RAL-894 1621 chr3R 4753226 4753261 chr3R 4757549 4757569 F-element 9 4320 7.5 4.0 5.8 1.3 4343 chr3R 4753226 intron,intron atms +,CG44098 - chr3R 4755398 intron,intron atms +,CG44098 - chr3R 4757569 intron,exon atms +,CG44098 - chr3R_9_4755001 chr3R_4755001 RAL-894 1622 chr3R 4796117 4796136 chr3R 4796240 4796276 6 138 5.5 4.5 5.0 1.0 159 chr3R 4796117 intron ctrip - chr3R 4796196 intron ctrip - chr3R 4796276 intron ctrip - chr3R_6_4795001 chr3R_4795001 RAL-894 1623 chr3R 4796139 4796149 chr3R 4796233 4796275 4 107 1.5 3.5 2.5 1.1 136 chr3R 4796139 intron ctrip - chr3R 4796207 intron ctrip - chr3R 4796275 intron ctrip - chr3R_4_4795001 chr3R_4795001 RAL-894 1624 chr3R 4861574 4861594 chr3R 4861650 4861668 5 82 2.5 3.0 2.8 1.3 94 chr3R 4861574 intron opa + chr3R 4861621 intron opa + chr3R 4861668 intron opa + chr3R_5_4860001 chr3R_4860001 RAL-894 1625 chr3R 4896278 4896306 chr3R 4896391 4896411 10 111 5.5 2.0 3.8 2.1 133 chr3R 4896278 intergenic CR45580 + chr3R 4896344 intergenic CR45580 + chr3R 4896411 intergenic CR45580 + chr3R_10_4895001 chr3R_4895001 RAL-894 1626 chr3R 4922331 4922344 chr3R 4922425 4922435 7 95 5.0 1.0 3.0 1.8 104 chr3R 4922331 intron Cdep + chr3R 4922383 intron Cdep + chr3R 4922435 intron Cdep + chr3R_7_4920001 chr3R_4920001 RAL-894 1627 chr3R 4922346 4922363 chr3R 4922424 4922430 5 85 2.5 1.0 1.8 1.8 84 chr3R 4922346 intron Cdep + chr3R 4922388 intron Cdep + chr3R 4922430 intron Cdep + chr3R_5_4920001 chr3R_4920001 RAL-894 1628 chr3R 4943603 4943622 chr3R 4943716 4943738 8 122 5.0 2.5 3.8 1.7 135 chr3R 4943603 intron Cdep + chr3R 4943670 intron Cdep + chr3R 4943738 intron Cdep + chr3R_8_4940001 chr3R_4940001 RAL-894 1629 chr3R 4965991 4966033 chr3R 4966097 4966145 12 108 5.0 2.0 3.5 2.7 154 chr3R 4965991 intron CG1124 + chr3R 4966068 intron CG1124 + chr3R 4966145 intron CG1124 + chr3R_12_4965001 chr3R_4965001 RAL-894 1630 chr3R 5045825 5045872 chr3R 5052947 5052994 HMS-Beagle 10 7118 6.5 3.5 5.0 1.7 7169 chr3R 5045825 3` UTR CR43635 - chr3R 5049410 intergenic not near genes chr3R 5052994 intergenic CR45588 - chr3R_10_5045001 chr3R_5045001 RAL-894 1631 chr3R 5067962 5068011 chr3R 5073499 5073548 mdg3 15 5536 4.0 5.0 4.5 2.7 5586 chr3R 5067962 intergenic not near genes chr3R 5070755 intergenic not near genes chr3R 5073548 intergenic not near genes chr3R_15_5070001 chr3R_5070001 RAL-894 1632 chr3R 5131310 5131328 chr3R 5131785 5131804 6 474 0.0 9.0 4.5 1.1 494 chr3R 5131310 intergenic not near genes chr3R 5131557 intergenic not near genes chr3R 5131804 intergenic not near genes chr3R_6_5130001 chr3R_5130001 RAL-894 1633 chr3R 5133149 5133161 chr3R 5133273 5133282 4 125 1.5 3.0 2.2 1.2 133 chr3R 5133149 intergenic not near genes chr3R 5133216 intergenic not near genes chr3R 5133282 intergenic not near genes chr3R_4_5130001 chr3R_5130001 RAL-894 1634 chr3R 5147586 5147641 chr3R 5148061 5148064 8 460 4.0 1.0 2.5 2.3 478 chr3R 5147586 intergenic not near genes chr3R 5147825 intergenic not near genes chr3R 5148064 intergenic not near genes chr3R_8_5145001 chr3R_5145001 RAL-894 1635 chr3R 5153190 5153218 chr3R 5153440 5153463 5 248 0.5 4.5 2.5 1.4 273 chr3R 5153190 intron dpr16 + chr3R 5153326 intron dpr16 + chr3R 5153463 intron dpr16 + chr3R_5_5150001 chr3R_5150001 RAL-894 1636 chr3R 5193897 5193926 chr3R 5194016 5194022 4 106 2.5 2.0 2.2 1.2 125 chr3R 5193897 intron cno - chr3R 5193960 intron cno - chr3R 5194022 intron cno - chr3R_4_5190001 chr3R_5190001 RAL-894 1637 chr3R 5278091 5278118 chr3R 5278172 5278192 8 84 2.5 6.0 4.2 1.5 101 chr3R 5278091 intron mtd - chr3R 5278142 intron mtd - chr3R 5278192 intron mtd - chr3R_8_5275001 chr3R_5275001 RAL-894 1638 chr3R 5338391 5338426 chr3R 5343573 5343623 Rt1c 6 5193 3.5 4.5 4.0 1.2 5232 chr3R 5338391 intron mtd - chr3R 5341007 intron mtd - chr3R 5343623 intron mtd - chr3R_6_5340001 chr3R_5340001 RAL-894 1639 chr3R 5385964 5385993 chr3R 5386150 5386184 7 188 3.0 3.5 3.2 1.7 220 chr3R 5385964 intron kkv - chr3R 5386074 intron kkv - chr3R 5386184 intron kkv - chr3R_7_5385001 chr3R_5385001 RAL-894 1640 chr3R 5445948 5445992 chr3R 5452428 5452472 Burdock 11 6479 2.0 2.5 2.2 3.4 6524 chr3R 5445948 intron CG14669 + chr3R 5449210 intron CG14669 + chr3R 5452472 intron CG14669 + chr3R_11_5445001 chr3R_5445001 RAL-894 1641 chr3R 5734631 5734682 chr3R 5734739 5734791 18 103 5.5 3.5 4.5 3.3 160 chr3R 5734631 exon CG1239 + chr3R 5734711 3` UTR CG2100 - chr3R 5734791 exon CG2100 - chr3R_18_5730001 chr3R_5730001 RAL-894 1642 chr3R 5746003 5746044 chr3R 5746254 5746305 pogo 7 259 1.0 5.0 3.0 1.8 302 chr3R 5746003 3` UTR Madm + chr3R 5746154 3` UTR Madm + chr3R 5746305 3` UTR Madm + chr3R_7_5745001 chr3R_5745001 RAL-894 1643 chr3R 5746999 5747049 chr3R 5753203 5753221 diver 11 6203 5.0 3.0 4.0 2.2 6222 chr3R 5746999 intergenic Madm + chr3R 5750110 intergenic not near genes chr3R 5753221 intergenic CG2091 - chr3R_11_5750001 chr3R_5750001 RAL-894 1644 chr3R 5772363 5772409 chr3R 5772541 5772587 8 177 3.5 3.0 3.2 1.9 224 chr3R 5772363 intron CG2082 - chr3R 5772475 intron CG2082 - chr3R 5772587 intron CG2082 - chr3R_8_5770001 chr3R_5770001 RAL-894 1645 chr3R 5809104 5809134 chr3R 5809353 5809395 pogo 4 257 3.0 3.5 3.2 1.0 291 chr3R 5809104 3` UTR CG11000 + chr3R 5809250 3` UTR CG11000 + chr3R 5809395 3` UTR CG11000 + chr3R_4_5805001 chr3R_5805001 RAL-894 1646 chr3R 5822363 5822410 chr3R 5823550 5823597 1360 12 1185 4.0 7.5 5.8 1.8 1234 chr3R 5822363 3` UTR CG2023 - chr3R 5822980 3` UTR CG2023 - chr3R 5823597 3` UTR CG2023 - chr3R_12_5820001 chr3R_5820001 RAL-894 1647 chr3R 5895964 5895987 chr3R 5896182 5896221 5 230 1.5 7.0 4.2 1.0 257 chr3R 5895964 intron CG34113 - chr3R 5896092 intron CG34113 - chr3R 5896221 intron CG34113 - chr3R_5_5895001 chr3R_5895001 RAL-894 1648 chr3R 5927545 5927585 chr3R 5927805 5927838 pogo 6 254 1.5 4.5 3.0 1.5 293 chr3R 5927545 intron CG34113 - chr3R 5927692 intron CG34113 - chr3R 5927838 intron CG34113 - chr3R_6_5925001 chr3R_5925001 RAL-894 1649 chr3R 6110432 6110476 chr3R 6110636 6110680 14 201 1.0 4.0 2.5 4.0 248 chr3R 6110432 exon Obp83ef - chr3R 6110556 intron Obp83ef - chr3R 6110680 intron Obp83ef - chr3R_14_6110001 chr3R_6110001 RAL-894 1650 chr3R 6119111 6119157 chr3R 6119217 6119263 5 104 1.5 5.5 3.5 1.1 152 chr3R 6119111 intergenic not near genes chr3R 6119187 intergenic not near genes chr3R 6119263 intergenic not near genes chr3R_5_6115001 chr3R_6115001 RAL-894 1651 chr3R 6130194 6130245 chr3R 6130383 6130396 4 166 1.5 1.5 1.5 1.6 202 chr3R 6130194 intergenic not near genes chr3R 6130295 intergenic not near genes chr3R 6130396 intergenic not near genes chr3R_4_6130001 chr3R_6130001 RAL-894 1652 chr3R 6158500 6158533 chr3R 6167093 6167123 Tirant 7 8595 4.5 0.5 2.5 2.0 8623 chr3R 6158500 intergenic not near genes chr3R 6162812 intergenic not near genes chr3R 6167123 intergenic CG1077 + chr3R_7_6160001 chr3R_6160001 RAL-894 1653 chr3R 6171133 6171181 chr3R 6171514 6171563 10 381 4.5 3.0 3.8 2.1 430 chr3R 6171133 intergenic not near genes chr3R 6171348 intergenic not near genes chr3R 6171563 intergenic not near genes chr3R_10_6170001 chr3R_6170001 RAL-894 1654 chr3R 6175161 6175197 chr3R 6182452 6182489 HMS-Beagle2 17 7286 3.0 2.5 2.8 4.5 7328 chr3R 6175161 intergenic Osi1 + chr3R 6178825 intron CR45194 + chr3R 6182489 intergenic CR45194 + chr3R_17_6175001 chr3R_6175001 RAL-894 1655 chr3R 6334773 6334810 chr3R 6334881 6334928 11 117 1.5 2.5 2.0 3.7 155 chr3R 6334773 intergenic not near genes chr3R 6334850 intergenic not near genes chr3R 6334928 intergenic Osi19 + chr3R_11_6330001 chr3R_6330001 RAL-894 1656 chr3R 6428807 6428827 chr3R 6428910 6428949 7 116 3.0 6.5 4.8 1.2 142 chr3R 6428807 intron gpp + chr3R 6428878 intron gpp + chr3R 6428949 intron gpp + chr3R_7_6425001 chr3R_6425001 RAL-894 1657 chr3R 6461558 6461608 chr3R 6461659 6461708 9 98 4.5 4.5 4.5 1.6 150 chr3R 6461558 intergenic not near genes chr3R 6461633 intergenic not near genes chr3R 6461708 intergenic not near genes chr3R_9_6460001 chr3R_6460001 RAL-894 1658 chr3R 6510019 6510050 chr3R 6515120 6515149 jockey 10 5100 4.0 4.5 4.2 1.9 5130 chr3R 6510019 intergenic not near genes chr3R 6512584 intergenic not near genes chr3R 6515149 intergenic not near genes chr3R_10_6510001 chr3R_6510001 RAL-894 1659 chr3R 6575237 6575284 chr3R 6575341 6575341 10 91 1.5 1.0 1.2 4.5 104 chr3R 6575237 intron dpr11 - chr3R 6575289 intron dpr11 - chr3R 6575341 intron dpr11 - chr3R_10_6575001 chr3R_6575001 RAL-894 1660 chr3R 6737503 6737525 chr3R 6739286 6739330 Doc 4 1796 1.0 3.0 2.0 1.3 1827 chr3R 6737503 intron pb - chr3R 6738416 intron pb - chr3R 6739330 intron pb - chr3R_4_6735001 chr3R_6735001 RAL-894 1661 chr3R 6773759 6773785 chr3R 6773840 6773845 4 76 0.5 4.0 2.2 1.2 86 chr3R 6773759 intron CR42721 + chr3R 6773802 intron CR42721 + chr3R 6773845 intron CR42721 + chr3R_4_6770001 chr3R_6770001 RAL-894 1662 chr3R 6803739 6803751 chr3R 6803835 6803846 6 94 0.0 2.5 1.2 2.7 107 chr3R 6803739 intergenic not near genes chr3R 6803792 intergenic not near genes chr3R 6803846 intergenic not near genes chr3R_6_6800001 chr3R_6800001 RAL-894 1663 chr3R 6856377 6856397 chr3R 6856504 6856534 6 133 1.5 2.0 1.8 2.1 157 chr3R 6856377 intergenic not near genes chr3R 6856456 intergenic not near genes chr3R 6856534 intergenic not near genes chr3R_6_6855001 chr3R_6855001 RAL-894 1664 chr3R 6891238 6891337 chr3R 6891333 6891555 12 131 0.5 0.5 0.5 8.0 317 chr3R 6891238 intergenic not near genes chr3R 6891396 intergenic not near genes chr3R 6891555 intergenic not near genes chr3R_12_6890001 chr3R_6890001 RAL-894 1665 chr3R 6958935 6958953 chr3R 6959145 6959183 7 222 1.5 3.0 2.2 2.2 248 chr3R 6958935 intron Antp - chr3R 6959059 intron Antp - chr3R 6959183 intron Antp - chr3R_7_6955001 chr3R_6955001 RAL-894 1666 chr3R 6991155 6991204 chr3R 6991251 6991276 6 87 1.0 0.0 0.5 4.0 121 chr3R 6991155 intron Antp - chr3R 6991216 intron Antp - chr3R 6991276 intron Antp - chr3R_6_6990001 chr3R_6990001 RAL-894 1667 chr3R 7103285 7103313 chr3R 7103361 7103396 7 82 2.5 5.0 3.8 1.5 111 chr3R 7103285 intron Alh - chr3R 7103340 intron Alh - chr3R 7103396 intron Alh - chr3R_7_7100001 chr3R_7100001 RAL-894 1668 chr3R 7121726 7121738 chr3R 7121829 7121841 4 103 2.0 6.5 4.2 0.8 115 chr3R 7121726 exon Alh - chr3R 7121784 intron Alh - chr3R 7121841 intron Alh - chr3R_4_7120001 chr3R_7120001 RAL-894 1669 chr3R 7126485 7126531 chr3R 7126600 7126646 14 113 5.0 5.5 5.2 2.3 161 chr3R 7126485 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126566 3` UTR CG10068 - chr3R 7126646 3` UTR CG10068 - chr3R_14_7125001 chr3R_7125001 RAL-894 1670 chr3R 7173668 7173702 chr3R 7173765 7173802 14 98 5.0 4.0 4.5 2.5 134 chr3R 7173668 intron sas + chr3R 7173735 intron sas + chr3R 7173802 intron sas + chr3R_14_7170001 chr3R_7170001 RAL-894 1671 chr3R 7198980 7199023 chr3R 7199086 7199108 12 102 3.0 2.5 2.8 3.2 128 chr3R 7198980 3` UTR lap + chr3R 7199044 3` UTR lap + chr3R 7199108 3` UTR lap + chr3R_12_7195001 chr3R_7195001 RAL-894 1672 chr3R 7205965 7206005 chr3R 7206073 7206094 6 100 2.0 4.0 3.0 1.5 129 chr3R 7205965 intergenic not near genes chr3R 7206030 intergenic not near genes chr3R 7206094 intergenic not near genes chr3R_6_7205001 chr3R_7205001 RAL-894 1673 chr3R 7272189 7272208 chr3R 7272270 7272279 4 82 2.0 3.5 2.8 1.1 90 chr3R 7272189 exon CG10032 + chr3R 7272234 intron CG10032 + chr3R 7272279 intron CG10032 + chr3R_4_7270001 chr3R_7270001 RAL-894 1674 chr3R 7322207 7322240 chr3R 7322308 7322338 6 96 2.0 0.5 1.2 2.7 131 chr3R 7322207 intergenic not near genes chr3R 7322272 intergenic not near genes chr3R 7322338 intergenic not near genes chr3R_6_7320001 chr3R_7320001 RAL-894 1675 chr3R 7447971 7448007 chr3R 7448069 7448105 11 95 5.5 3.5 4.5 2.0 134 chr3R 7447971 intergenic not near genes chr3R 7448038 intergenic not near genes chr3R 7448105 intergenic not near genes chr3R_11_7445001 chr3R_7445001 RAL-894 1676 chr3R 7542441 7542464 chr3R 7542539 7542562 7 98 0.5 0.0 0.2 5.8 121 chr3R 7542441 intron alpha-Est2 + chr3R 7542502 intron alpha-Est2 + chr3R 7542562 intron alpha-Est2 + chr3R_7_7540001 chr3R_7540001 RAL-894 1677 chr3R 7545681 7545722 chr3R 7545919 7545953 13 241 4.0 1.5 2.8 3.4 272 chr3R 7545681 intergenic alpha-Est1 -,alpha-Est2 + chr3R 7545817 3` UTR alpha-Est1 - chr3R 7545953 3` UTR alpha-Est1 - chr3R_13_7545001 chr3R_7545001 RAL-894 1678 chr3R 7678998 7679003 chr3R 7679508 7679532 4 521 11.5 3.5 7.5 0.5 534 chr3R 7678998 intron Nlg1 + chr3R 7679265 intron Nlg1 + chr3R 7679532 intron Nlg1 + chr3R_4_7675001 chr3R_7675001 RAL-894 1679 chr3R 7694567 7694605 chr3R 7713648 7713678 invader3 4 19078 2.0 5.0 3.5 0.9 19111 chr3R 7694567 3` UTR Nlg1 + chr3R 7704122 intergenic not near genes chr3R 7713678 intergenic not near genes chr3R_4_7700001 chr3R_7700001 RAL-894 1680 chr3R 7729449 7729492 chr3R 7737402 7737441 Stalker2 6 7944 6.0 6.5 6.2 0.8 7992 chr3R 7729449 intergenic not near genes chr3R 7733445 intergenic not near genes chr3R 7737441 intergenic not near genes chr3R_6_7730001 chr3R_7730001 RAL-894 1681 chr3R 7832846 7832879 chr3R 7833043 7833072 5 194 1.0 7.0 4.0 1.0 226 chr3R 7832846 intron CG34384 + chr3R 7832959 intron CG34384 + chr3R 7833072 intron CG34384 + chr3R_5_7830001 chr3R_7830001 RAL-894 1682 chr3R 7849627 7849674 chr3R 7850813 7850841 1360 8 1180 1.5 7.5 4.5 1.5 1214 chr3R 7849627 intron CG34384 + chr3R 7850234 intron CG34384 + chr3R 7850841 intron CG34384 + chr3R_8_7850001 chr3R_7850001 RAL-894 1683 chr3R 7857642 7857665 chr3R 7857726 7857761 7 94 10.0 4.0 7.0 0.9 119 chr3R 7857642 3` UTR CG17816 - chr3R 7857702 3` UTR CG17816 - chr3R 7857761 3` UTR CG17816 - chr3R_7_7855001 chr3R_7855001 RAL-894 1684 chr3R 7973299 7973339 chr3R 7974381 7974421 1360 17 1081 3.0 3.5 3.2 4.0 1122 chr3R 7973299 intergenic not near genes chr3R 7973860 intergenic not near genes chr3R 7974421 3` UTR CD98hc - chr3R_17_7970001 chr3R_7970001 RAL-894 1685 chr3R 8040655 8040674 chr3R 8040733 8040778 7 100 0.5 3.5 2.0 2.3 123 chr3R 8040655 intergenic not near genes chr3R 8040716 intergenic not near genes chr3R 8040778 intergenic CG43060 + chr3R_7_8040001 chr3R_8040001 RAL-894 1686 chr3R 8094394 8094427 chr3R 8099719 8099752 Transpac 13 5324 5.0 4.0 4.5 2.4 5358 chr3R 8094394 intron CG7900 + chr3R 8097073 intron CG7900 + chr3R 8099752 intron CG7900 + chr3R_13_8095001 chr3R_8095001 RAL-894 1687 chr3R 8182654 8182684 chr3R 8182746 8182768 13 96 1.0 5.0 3.0 3.2 114 chr3R 8182654 intergenic not near genes chr3R 8182711 intergenic not near genes chr3R 8182768 intergenic not near genes chr3R_13_8180001 chr3R_8180001 RAL-894 1688 chr3R 8194617 8194649 chr3R 8194717 8194745 7 100 2.0 0.5 1.2 3.2 128 chr3R 8194617 intergenic not near genes chr3R 8194681 intergenic not near genes chr3R 8194745 intergenic not near genes chr3R_7_8190001 chr3R_8190001 RAL-894 1689 chr3R 8293622 8293665 chr3R 8293717 8293765 23 99 6.0 1.5 3.8 4.8 143 chr3R 8293622 intergenic CG31463 +,CG9626 - chr3R 8293694 intergenic CG31463 +,CG9626 - chr3R 8293765 intergenic CG9626 -,CG31463 + chr3R_23_8290001 chr3R_8290001 RAL-894 1690 chr3R 8293981 8294016 chr3R 8294179 8294205 10 193 1.5 1.0 1.2 4.5 224 chr3R 8293981 3` UTR CG9626 - chr3R 8294093 3` UTR CG9626 - chr3R 8294205 3` UTR CG9626 - chr3R_10_8290001 chr3R_8290001 RAL-894 1691 chr3R 8339246 8339247 chr3R 21907535 21907536 7 13568288 14.5 14.0 14.2 0.5 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_7_15120001 chr3R_15120001 RAL-894 1692 chr3R 8393562 8393602 chr3R 8393666 8393692 6 94 0.5 4.0 2.2 1.9 130 chr3R 8393562 intron CG45263 - chr3R 8393627 intron CG45263 - chr3R 8393692 intron CG45263 - chr3R_6_8390001 chr3R_8390001 RAL-894 1693 chr3R 8402987 8403033 chr3R 8412173 8412212 roo 8 9176 2.0 1.5 1.8 2.9 9225 chr3R 8402987 intron CG45263 - chr3R 8407600 intron CG45263 - chr3R 8412212 intron CG45263 - chr3R_8_8405001 chr3R_8405001 RAL-894 1694 chr3R 8506716 8506765 chr3R 8507000 8507019 8 273 0.5 3.5 2.0 2.7 303 chr3R 8506716 intergenic not near genes chr3R 8506868 intergenic not near genes chr3R 8507019 intergenic not near genes chr3R_8_8505001 chr3R_8505001 RAL-894 1695 chr3R 8552346 8552400 chr3R 8552446 8552484 4 84 2.0 2.5 2.2 1.2 138 chr3R 8552346 intergenic Or85d + chr3R 8552415 intergenic Or85d + chr3R 8552484 intergenic Or85d + chr3R_4_8550001 chr3R_8550001 RAL-894 1696 chr3R 8614807 8614819 chr3R 8614993 8615017 4 197 0.0 2.5 1.2 1.8 210 chr3R 8614807 intron 5-HT2B + chr3R 8614912 intron 5-HT2B + chr3R 8615017 intron 5-HT2B + chr3R_4_8610001 chr3R_8610001 RAL-894 1697 chr3R 8685293 8685311 chr3R 8685395 8685431 7 117 2.0 1.0 1.5 2.8 138 chr3R 8685293 intron CR44937 - chr3R 8685362 intron CR44937 - chr3R 8685431 intron CR44937 - chr3R_7_8685001 chr3R_8685001 RAL-894 1698 chr3R 8707354 8707383 chr3R 8709802 8709844 jockey 6 2456 1.5 1.0 1.2 2.7 2490 chr3R 8707354 intergenic not near genes chr3R 8708599 intergenic not near genes chr3R 8709844 intergenic not near genes chr3R_6_8705001 chr3R_8705001 RAL-894 1699 chr3R 8917873 8917883 chr3R 8917973 8917983 4 100 9.5 3.0 6.2 0.6 110 chr3R 8917873 intron pyd - chr3R 8917928 intron pyd - chr3R 8917983 intron pyd - chr3R_4_8915001 chr3R_8915001 RAL-894 1700 chr3R 8917885 8917912 chr3R 8917970 8918012 13 97 4.0 2.0 3.0 3.2 127 chr3R 8917885 intron pyd - chr3R 8917948 intron pyd - chr3R 8918012 intron pyd - chr3R_13_8915001 chr3R_8915001 RAL-894 1701 chr3R 8918205 8918235 chr3R 8918298 8918311 9 96 2.5 4.0 3.2 2.1 106 chr3R 8918205 intron pyd - chr3R 8918258 intron pyd - chr3R 8918311 intron pyd - chr3R_9_8915001 chr3R_8915001 RAL-894 1702 chr3R 8993404 8993448 chr3R 8993504 8993529 6 88 1.5 0.5 1.0 3.0 125 chr3R 8993404 exon CG11975 + chr3R 8993466 intron CG11975 + chr3R 8993529 intron CG11975 + chr3R_6_8990001 chr3R_8990001 RAL-894 1703 chr3R 9036695 9036745 chr3R 9036811 9036861 12 115 1.5 7.5 4.5 2.2 166 chr3R 9036695 intron neur - chr3R 9036778 intron neur - chr3R 9036861 intron neur - chr3R_12_9035001 chr3R_9035001 RAL-894 1704 chr3R 9108867 9108883 chr3R 9108940 9108979 4 90 5.5 5.0 5.2 0.6 112 chr3R 9108867 intron pum - chr3R 9108923 intron pum - chr3R 9108979 intron pum - chr3R_4_9105001 chr3R_9105001 RAL-894 1705 chr3R 9227942 9227964 chr3R 9228051 9228096 16 130 5.0 3.0 4.0 3.2 154 chr3R 9227942 intron pum - chr3R 9228019 intron pum - chr3R 9228096 intron pum - chr3R_16_9225001 chr3R_9225001 RAL-894 1706 chr3R 9284874 9284886 chr3R 9284978 9284990 4 104 5.0 6.5 5.8 0.6 116 chr3R 9284874 intergenic not near genes chr3R 9284932 intergenic not near genes chr3R 9284990 intergenic not near genes chr3R_4_9280001 chr3R_9280001 RAL-894 1707 chr3R 9284888 9284907 chr3R 9284961 9285006 7 95 1.5 4.0 2.8 1.8 118 chr3R 9284888 intergenic not near genes chr3R 9284947 intergenic not near genes chr3R 9285006 intergenic not near genes chr3R_7_9280001 chr3R_9280001 RAL-894 1708 chr3R 9361808 9361841 chr3R 9362069 9362092 pogo 11 260 2.0 7.5 4.8 1.9 284 chr3R 9361808 3` UTR CG45050 + chr3R 9361950 3` UTR CG45050 + chr3R 9362092 3` UTR CG45050 + chr3R_11_9360001 chr3R_9360001 RAL-894 1709 chr3R 9382800 9382845 chr3R 9382945 9382990 10 141 2.5 3.0 2.8 2.6 190 chr3R 9382800 intron FER - chr3R 9382895 intron FER - chr3R 9382990 intron FER - chr3R_10_9380001 chr3R_9380001 RAL-894 1710 chr3R 9644563 9644606 chr3R 9644664 9644706 13 99 4.0 4.0 4.0 2.6 143 chr3R 9644563 intron Dh44 + chr3R 9644634 intron Dh44 + chr3R 9644706 intron Dh44 + chr3R_13_9640001 chr3R_9640001 RAL-894 1711 chr3R 9781167 9781174 chr3R 9787175 9787204 8 6009 15.0 30.5 22.8 0.3 6037 chr3R 9781167 3` UTR,intron CR31514 -,CG12947 + chr3R 9784186 intron MtnA - chr3R 9787204 3` UTR CG8500 + chr3R_8_9780001 chr3R_9780001 RAL-894 1712 chr3R 9806383 9806433 chr3R 9806479 9806529 12 94 4.0 3.5 3.8 2.5 146 chr3R 9806383 exon FBX011 - chr3R 9806456 intron FBX011 - chr3R 9806529 exon FBX011 - chr3R_12_9805001 chr3R_9805001 RAL-894 1713 chr3R 9829398 9829432 chr3R 9829499 9829537 8 103 3.5 3.5 3.5 1.8 139 chr3R 9829398 intron Teh1 - chr3R 9829468 intron Teh1 - chr3R 9829537 intron Teh1 - chr3R_8_9825001 chr3R_9825001 RAL-894 1714 chr3R 9830766 9830777 chr3R 9830952 9830974 5 192 5.5 3.0 4.2 1.0 208 chr3R 9830766 intron Teh1 - chr3R 9830870 intron Teh1 - chr3R 9830974 intron Teh1 - chr3R_5_9830001 chr3R_9830001 RAL-894 1715 chr3R 9836926 9836933 chr3R 9837003 9837045 4 101 2.5 4.0 3.2 1.0 119 chr3R 9836926 intron Teh1 - chr3R 9836986 intron Teh1 - chr3R 9837045 intron Teh1 - chr3R_4_9835001 chr3R_9835001 RAL-894 1716 chr3R 9858672 9858688 chr3R 9858790 9858800 7 117 5.0 3.0 4.0 1.4 128 chr3R 9858672 intron Teh1 - chr3R 9858736 intron Teh1 - chr3R 9858800 intron Teh1 - chr3R_7_9855001 chr3R_9855001 RAL-894 1717 chr3R 10073758 10073797 chr3R 10073887 10073906 9 123 3.5 1.5 2.5 2.6 148 chr3R 10073758 3` UTR nerfin-2 + chr3R 10073832 3` UTR CG5361 - chr3R 10073906 exon CG5361 - chr3R_9_10070001 chr3R_10070001 RAL-894 1718 chr3R 10192271 10192301 chr3R 10192473 10192507 9 199 2.5 3.5 3.0 2.2 236 chr3R 10192271 intron Syn + chr3R 10192389 intron Syn + chr3R 10192507 intron Syn + chr3R_9_10190001 chr3R_10190001 RAL-894 1719 chr3R 10231765 10231783 chr3R 10237360 10237380 mdg3 6 5595 9.5 2.0 5.8 0.9 5615 chr3R 10231765 intron CG42795 + chr3R 10234572 intron CG42795 + chr3R 10237380 intron CG42795 + chr3R_6_10230001 chr3R_10230001 RAL-894 1720 chr3R 10231789 10231805 chr3R 10237357 10237369 mdg3 5 5581 6.0 1.5 3.8 1.0 5580 chr3R 10231789 intron CG42795 + chr3R 10234579 intron CG42795 + chr3R 10237369 intron CG42795 + chr3R_5_10230001 chr3R_10230001 RAL-894 1721 chr3R 10255364 10255385 chr3R 10260824 10260845 I-element 6 5460 8.0 3.0 5.5 0.9 5481 chr3R 10255364 3` UTR Sirt6 - chr3R 10258104 intron Sirt6 - chr3R 10260845 exon Sirt6 - chr3R_6_10255001 chr3R_10255001 RAL-894 1722 chr3R 10417456 10417506 chr3R 10417810 10417861 10 348 2.5 1.0 1.8 3.6 405 chr3R 10417456 intergenic not near genes chr3R 10417658 intergenic not near genes chr3R 10417861 intergenic not near genes chr3R_10_10415001 chr3R_10415001 RAL-894 1723 chr3R 10512354 10512376 chr3R 10512481 10512491 4 124 5.5 4.0 4.8 0.7 137 chr3R 10512354 intron hth - chr3R 10512422 intron hth - chr3R 10512491 intron hth - chr3R_4_10510001 chr3R_10510001 RAL-894 1724 chr3R 10563124 10563148 chr3R 10563223 10563238 4 94 2.0 2.5 2.2 1.2 114 chr3R 10563124 intron hth - chr3R 10563181 intron hth - chr3R 10563238 intron hth - chr3R_4_10560001 chr3R_10560001 RAL-894 1725 chr3R 10594139 10594181 chr3R 10594244 10594246 6 92 4.5 1.5 3.0 1.5 107 chr3R 10594139 intron hth - chr3R 10594192 intron hth - chr3R 10594246 intron hth - chr3R_6_10590001 chr3R_10590001 RAL-894 1726 chr3R 10619216 10619255 chr3R 10619319 10619338 9 100 3.5 6.0 4.8 1.6 122 chr3R 10619216 intergenic not near genes chr3R 10619277 intergenic not near genes chr3R 10619338 intergenic not near genes chr3R_9_10615001 chr3R_10615001 RAL-894 1727 chr3R 10687317 10687325 chr3R 10687413 10687421 5 96 5.0 8.0 6.5 0.7 104 chr3R 10687317 intron Skeletor + chr3R 10687369 intron Skeletor + chr3R 10687421 intron Skeletor + chr3R_5_10685001 chr3R_10685001 RAL-894 1728 chr3R 10696144 10696176 chr3R 10696226 10696270 13 96 6.0 7.0 6.5 1.7 126 chr3R 10696144 3` UTR Skeletor + chr3R 10696207 3` UTR Skeletor + chr3R 10696270 3` UTR Skeletor + chr3R_13_10695001 chr3R_10695001 RAL-894 1729 chr3R 10785815 10785839 chr3R 10785907 10785933 7 97 7.5 8.5 8.0 0.8 118 chr3R 10785815 intron Rbp1 + chr3R 10785874 intron Rbp1 + chr3R 10785933 intron Rbp1 + chr3R_7_10785001 chr3R_10785001 RAL-894 1730 chr3R 10804165 10804194 chr3R 10811707 10811741 17.6 9 7549 6.0 3.5 4.8 1.6 7576 chr3R 10804165 intergenic CG14692 - chr3R 10807953 intergenic not near genes chr3R 10811741 3` UTR CG14693 - chr3R_9_10805001 chr3R_10805001 RAL-894 1731 chr3R 10886871 10886890 chr3R 10886956 10886990 4 96 3.5 3.5 3.5 0.9 119 chr3R 10886871 intron Leash + chr3R 10886930 intron Leash + chr3R 10886990 intron Leash + chr3R_4_10885001 chr3R_10885001 RAL-894 1732 chr3R 10919673 10919717 chr3R 10919771 10919815 8 98 5.0 2.5 3.8 1.7 142 chr3R 10919673 intergenic not near genes chr3R 10919744 intergenic not near genes chr3R 10919815 intergenic not near genes chr3R_8_10915001 chr3R_10915001 RAL-894 1733 chr3R 10920040 10920077 chr3R 10920137 10920160 11 92 2.5 3.5 3.0 2.8 120 chr3R 10920040 intergenic not near genes chr3R 10920100 intergenic not near genes chr3R 10920160 intergenic not near genes chr3R_11_10920001 chr3R_10920001 RAL-894 1734 chr3R 10927360 10927379 chr3R 10927606 10927620 4 250 0.5 0.0 0.2 3.3 260 chr3R 10927360 intergenic not near genes chr3R 10927490 intergenic not near genes chr3R 10927620 intergenic not near genes chr3R_4_10925001 chr3R_10925001 RAL-894 1735 chr3R 10942318 10942358 chr3R 10942428 10942468 10 109 7.5 8.0 7.8 1.1 150 chr3R 10942318 intergenic not near genes chr3R 10942393 intergenic not near genes chr3R 10942468 intergenic not near genes chr3R_10_10940001 chr3R_10940001 RAL-894 1736 chr3R 10976526 10976573 chr3R 10977849 10977894 19 1320 5.5 2.5 4.0 3.8 1368 chr3R 10976526 intron CG34114 + chr3R 10977210 intron CG34114 + chr3R 10977894 intron CG34114 + chr3R_19_10975001 chr3R_10975001 RAL-894 1737 chr3R 11085457 11085487 chr3R 11085549 11085564 5 87 2.0 3.0 2.5 1.4 107 chr3R 11085457 3` UTR CR44940 - chr3R 11085510 intergenic CR44940 - chr3R 11085564 intergenic CR44940 - chr3R_5_11085001 chr3R_11085001 RAL-894 1738 chr3R 11104257 11104280 chr3R 11104350 11104358 4 86 1.5 0.5 1.0 2.0 101 chr3R 11104257 intergenic not near genes chr3R 11104308 intergenic not near genes chr3R 11104358 intergenic not near genes chr3R_4_11100001 chr3R_11100001 RAL-894 1739 chr3R 11130101 11130142 chr3R 11130209 11130210 6 95 2.0 0.0 1.0 3.0 109 chr3R 11130101 intergenic not near genes chr3R 11130156 intergenic not near genes chr3R 11130210 intergenic not near genes chr3R_6_11130001 chr3R_11130001 RAL-894 1740 chr3R 11157065 11157102 chr3R 11157176 11157213 4 109 6.5 6.0 6.2 0.6 148 chr3R 11157065 intergenic Ugt86Da + chr3R 11157139 5` UTR Ugt86Da + chr3R 11157213 5` UTR Ugt86Da + chr3R_4_11155001 chr3R_11155001 RAL-894 1741 chr3R 11174578 11174615 chr3R 11175306 11175343 10 727 16.5 21.0 18.8 0.5 765 chr3R 11174578 exon Ugt86Dj - chr3R 11174960 intron Ugt86Dj - chr3R 11175343 exon Ugt86Dj - chr3R_10_11170001 chr3R_11170001 RAL-894 1742 chr3R 11178225 11178237 chr3R 11178304 11178311 5 81 1.0 1.5 1.2 2.3 86 chr3R 11178225 intergenic Ugt86Dh + chr3R 11178268 intergenic Ugt86Dh + chr3R 11178311 intergenic Ugt86Dh + chr3R_5_11175001 chr3R_11175001 RAL-894 1743 chr3R 11178239 11178245 chr3R 11178302 11178348 4 93 1.0 1.5 1.2 1.8 109 chr3R 11178239 intergenic Ugt86Dh + chr3R 11178294 intergenic Ugt86Dh + chr3R 11178348 intergenic Ugt86Dh + chr3R_4_11175001 chr3R_11175001 RAL-894 1744 chr3R 11248860 11248902 chr3R 11248989 11249018 8 125 4.0 2.0 3.0 2.0 158 chr3R 11248860 3` UTR CR43283 - chr3R 11248939 3` UTR CR43283 - chr3R 11249018 3` UTR CR43283 - chr3R_8_11245001 chr3R_11245001 RAL-894 1745 chr3R 11287963 11287981 chr3R 11288125 11288160 6 167 2.0 3.0 2.5 1.7 197 chr3R 11287963 intron CR31386 - chr3R 11288062 intron CR31386 - chr3R 11288160 intron CR31386 - chr3R_6_11285001 chr3R_11285001 RAL-894 1746 chr3R 11296421 11296439 chr3R 11296501 11296514 6 88 3.0 1.5 2.2 1.9 93 chr3R 11296421 intron CR31386 - chr3R 11296468 intron CR31386 - chr3R 11296514 intron CR31386 - chr3R_6_11295001 chr3R_11295001 RAL-894 1747 chr3R 11461569 11461585 chr3R 11461677 11461728 4 118 2.5 1.5 2.0 1.3 159 chr3R 11461569 intron CG17230 + chr3R 11461648 intron CG17230 + chr3R 11461728 intron CG17230 + chr3R_4_11460001 chr3R_11460001 RAL-894 1748 chr3R 11476948 11476963 chr3R 11477069 11477084 7 122 3.5 5.5 4.5 1.3 136 chr3R 11476948 intergenic not near genes chr3R 11477016 intergenic not near genes chr3R 11477084 intergenic not near genes chr3R_7_11475001 chr3R_11475001 RAL-894 1749 chr3R 11518804 11518843 chr3R 11518912 11518938 7 103 4.5 1.5 3.0 1.8 134 chr3R 11518804 intergenic not near genes chr3R 11518871 intergenic not near genes chr3R 11518938 intergenic not near genes chr3R_7_11515001 chr3R_11515001 RAL-894 1750 chr3R 11694705 11694754 chr3R 11694818 11694837 15 106 3.0 7.0 5.0 2.5 132 chr3R 11694705 intergenic Fer3 - chr3R 11694771 intergenic Fer3 - chr3R 11694837 intergenic not near genes chr3R_15_11690001 chr3R_11690001 RAL-894 1751 chr3R 11841092 11841096 chr3R 11846272 11846281 BS 5 5193 0.5 5.5 3.0 1.2 5189 chr3R 11841092 intron CG6959 - chr3R 11843686 intron CG6959 - chr3R 11846281 intron CG6959 - chr3R_5_11840001 chr3R_11840001 RAL-894 1752 chr3R 11853414 11853471 chr3R 11853583 11853633 14 162 1.5 3.5 2.5 4.0 219 chr3R 11853414 intron CG6959 - chr3R 11853524 intron CG6959 - chr3R 11853633 intron CG6959 - chr3R_14_11850001 chr3R_11850001 RAL-894 1753 chr3R 11853761 11853802 chr3R 11853886 11853927 18 124 6.5 6.5 6.5 2.4 166 chr3R 11853761 intron CG6959 - chr3R 11853844 intron CG6959 - chr3R 11853927 intron CG6959 - chr3R_18_11850001 chr3R_11850001 RAL-894 1754 chr3R 11914374 11914400 chr3R 11914477 11914504 6 101 4.0 3.0 3.5 1.3 130 chr3R 11914374 intron Cad87A - chr3R 11914439 intron Cad87A - chr3R 11914504 intron Cad87A - chr3R_6_11910001 chr3R_11910001 RAL-894 1755 chr3R 11945376 11945405 chr3R 11945494 11945512 7 111 3.5 6.5 5.0 1.2 136 chr3R 11945376 intron Cad87A - chr3R 11945444 intron Cad87A - chr3R 11945512 intron Cad87A - chr3R_7_11945001 chr3R_11945001 RAL-894 1756 chr3R 11957840 11957872 chr3R 11958142 11958164 S-element 6 299 2.0 0.5 1.2 2.7 324 chr3R 11957840 intergenic not near genes chr3R 11958002 intergenic not near genes chr3R 11958164 intergenic not near genes chr3R_6_11955001 chr3R_11955001 RAL-894 1757 chr3R 11990644 11990662 chr3R 11990752 11990770 6 108 8.5 6.0 7.2 0.7 126 chr3R 11990644 intron mfas - chr3R 11990707 intron mfas - chr3R 11990770 intron mfas - chr3R_6_11990001 chr3R_11990001 RAL-894 1758 chr3R 12022875 12022916 chr3R 12025060 12025113 pogo 13 2193 1.5 5.0 3.2 3.1 2238 chr3R 12022875 intergenic not near genes chr3R 12023994 intergenic not near genes chr3R 12025113 intergenic not near genes chr3R_13_12020001 chr3R_12020001 RAL-894 1759 chr3R 12080848 12080889 chr3R 12080941 12080987 9 92 7.0 2.0 4.5 1.6 139 chr3R 12080848 intron CG14741 - chr3R 12080918 intron CG14741 - chr3R 12080987 intron CG14741 - chr3R_9_12080001 chr3R_12080001 RAL-894 1760 chr3R 12099187 12099233 chr3R 12099436 12099458 5 237 4.0 2.0 3.0 1.2 271 chr3R 12099187 intron dpr17 + chr3R 12099322 intron dpr17 + chr3R 12099458 intron dpr17 + chr3R_5_12095001 chr3R_12095001 RAL-894 1761 chr3R 12247135 12247169 chr3R 12247228 12247274 7 102 2.0 1.5 1.8 2.5 139 chr3R 12247135 intergenic not near genes chr3R 12247204 intergenic not near genes chr3R 12247274 intergenic not near genes chr3R_7_12245001 chr3R_12245001 RAL-894 1762 chr3R 12267837 12267886 chr3R 12267937 12267986 13 96 2.5 3.0 2.8 3.4 149 chr3R 12267837 intron svp + chr3R 12267912 intron svp + chr3R 12267986 intron svp + chr3R_13_12265001 chr3R_12265001 RAL-894 1763 chr3R 12344110 12344139 chr3R 12344206 12344225 6 94 6.0 3.0 4.5 1.1 115 chr3R 12344110 intergenic not near genes chr3R 12344168 intergenic not near genes chr3R 12344225 intergenic not near genes chr3R_6_12340001 chr3R_12340001 RAL-894 1764 chr3R 12365186 12365232 chr3R 12365407 12365408 15 213 1.5 2.5 2.0 5.0 222 chr3R 12365186 exon GstD10 - chr3R 12365297 exon GstD10 - chr3R 12365408 exon GstD10 - chr3R_15_12365001 chr3R_12365001 RAL-894 1765 chr3R 12694171 12694222 chr3R 12694697 12694748 11 524 6.0 3.5 4.8 1.9 577 chr3R 12694171 3` UTR Arp1 + chr3R 12694460 exon CG14391 - chr3R 12694748 5` UTR CG14391 - chr3R_11_12690001 chr3R_12690001 RAL-894 1766 chr3R 12739043 12739070 chr3R 12739116 12739166 8 90 4.0 6.5 5.2 1.3 123 chr3R 12739043 intergenic not near genes chr3R 12739104 intergenic not near genes chr3R 12739166 intergenic CG5724 + chr3R_8_12735001 chr3R_12735001 RAL-894 1767 chr3R 12787924 12787955 chr3R 12788027 12788058 7 103 0.5 2.5 1.5 2.8 134 chr3R 12787924 intergenic not near genes chr3R 12787991 intergenic not near genes chr3R 12788058 intergenic not near genes chr3R_7_12785001 chr3R_12785001 RAL-894 1768 chr3R 12864543 12864590 chr3R 12865048 12865095 roo 11 504 2.0 2.0 2.0 3.7 552 chr3R 12864543 intergenic not near genes chr3R 12864819 intergenic not near genes chr3R 12865095 intergenic not near genes chr3R_11_12860001 chr3R_12860001 RAL-894 1769 chr3R 12886915 12886941 chr3R 12887006 12887046 7 103 0.5 2.5 1.5 2.8 131 chr3R 12886915 intergenic not near genes chr3R 12886980 intergenic not near genes chr3R 12887046 intergenic not near genes chr3R_7_12885001 chr3R_12885001 RAL-894 1770 chr3R 12920184 12920185 chr3R 12925356 12925403 copia 5 5192 1.5 5.0 3.2 1.2 5219 chr3R 12920184 intron beat-Vb + chr3R 12922794 intron beat-Vb + chr3R 12925403 intron beat-Vb + chr3R_5_12920001 chr3R_12920001 RAL-894 1771 chr3R 12944437 12944459 chr3R 12944775 12944782 5 331 1.5 0.5 1.0 2.5 345 chr3R 12944437 intergenic not near genes chr3R 12944610 intergenic not near genes chr3R 12944782 intergenic not near genes chr3R_5_12940001 chr3R_12940001 RAL-894 1772 chr3R 13048311 13048322 chr3R 13052387 13052405 7 4080 78.0 52.5 65.2 0.1 4094 chr3R 13048311 intron CG31157 + chr3R 13050358 exon CG7966 - chr3R 13052405 5` UTR pic + chr3R_7_13050001 chr3R_13050001 RAL-894 1773 chr3R 13048306 13048346 chr3R 13052408 13052435 22 4096 87.5 47.0 67.2 0.3 4129 chr3R 13048306 intron CG31157 + chr3R 13050370 exon CG7966 - chr3R 13052435 exon pic + chr3R_22_13050001 chr3R_13050001 RAL-894 1774 chr3R 13059942 13059976 chr3R 13060157 13060191 10 212 5.5 5.5 5.5 1.5 249 chr3R 13059942 intron sim + chr3R 13060066 intron sim + chr3R 13060191 intron sim + chr3R_10_13060001 chr3R_13060001 RAL-894 1775 chr3R 13061862 13061909 chr3R 13061976 13062024 11 113 1.0 2.5 1.8 3.9 162 chr3R 13061862 intron sim + chr3R 13061943 intron sim + chr3R 13062024 intron sim + chr3R_11_13060001 chr3R_13060001 RAL-894 1776 chr3R 13066987 13067008 chr3R 13067094 13067115 7 105 4.0 5.5 4.8 1.2 128 chr3R 13066987 intron sim + chr3R 13067051 intron sim + chr3R 13067115 intron sim + chr3R_7_13065001 chr3R_13065001 RAL-894 1777 chr3R 13075338 13075366 chr3R 13075439 13075467 7 100 5.5 3.0 4.2 1.3 129 chr3R 13075338 intron sim + chr3R 13075402 intron sim + chr3R 13075467 intron sim + chr3R_7_13075001 chr3R_13075001 RAL-894 1778 chr3R 13119223 13119271 chr3R 13119320 13119368 10 89 4.0 5.0 4.5 1.8 145 chr3R 13119223 intron timeout + chr3R 13119296 intron timeout + chr3R 13119368 intron timeout + chr3R_10_13115001 chr3R_13115001 RAL-894 1779 chr3R 13120761 13120797 chr3R 13120848 13120858 5 80 1.0 0.5 0.8 2.8 97 chr3R 13120761 intron timeout + chr3R 13120810 intron timeout + chr3R 13120858 intron timeout + chr3R_5_13120001 chr3R_13120001 RAL-894 1780 chr3R 13125614 13125653 chr3R 13125709 13125762 7 103 2.5 1.0 1.8 2.5 148 chr3R 13125614 intron,3` UTR timeout +,2mit - chr3R 13125688 intron,3` UTR timeout +,2mit - chr3R 13125762 intron,3` UTR timeout +,2mit - chr3R_7_13125001 chr3R_13125001 RAL-894 1781 chr3R 13135830 13135856 chr3R 13138010 13138051 pogo 12 2194 4.5 1.0 2.8 3.2 2221 chr3R 13135830 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136940 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138051 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_12_13135001 chr3R_13135001 RAL-894 1782 chr3R 13138877 13138903 chr3R 13139090 13139113 10 226 4.5 3.0 3.8 2.1 236 chr3R 13138877 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138995 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13139113 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_10_13135001 chr3R_13135001 RAL-894 1783 chr3R 13278026 13278073 chr3R 13278133 13278175 10 101 6.5 1.0 3.8 2.1 149 chr3R 13278026 intergenic not near genes chr3R 13278100 intergenic not near genes chr3R 13278175 intergenic not near genes chr3R_10_13275001 chr3R_13275001 RAL-894 1784 chr3R 13351849 13351889 chr3R 13352088 13352128 8 230 5.5 0.5 3.0 2.0 279 chr3R 13351849 intergenic not near genes chr3R 13351988 intergenic not near genes chr3R 13352128 intergenic not near genes chr3R_8_13350001 chr3R_13350001 RAL-894 1785 chr3R 13379124 13379158 chr3R 13379219 13379259 10 90 2.5 2.5 2.5 2.9 135 chr3R 13379124 intron CG9813 - chr3R 13379192 intron CG9813 - chr3R 13379259 intron CG9813 - chr3R_10_13375001 chr3R_13375001 RAL-894 1786 chr3R 13469437 13469467 chr3R 13469969 13469988 6 529 4.5 0.0 2.2 1.9 551 chr3R 13469437 intergenic not near genes chr3R 13469712 intergenic not near genes chr3R 13469988 intergenic not near genes chr3R_6_13465001 chr3R_13465001 RAL-894 1787 chr3R 13517226 13517241 chr3R 13520052 13520077 jockey 4 2834 3.0 6.0 4.5 0.7 2851 chr3R 13517226 intergenic not near genes chr3R 13518652 intergenic not near genes chr3R 13520077 intergenic not near genes chr3R_4_13515001 chr3R_13515001 RAL-894 1788 chr3R 13526676 13526702 chr3R 13526775 13526800 7 99 4.0 3.5 3.8 1.5 124 chr3R 13526676 intergenic not near genes chr3R 13526738 intergenic not near genes chr3R 13526800 intergenic not near genes chr3R_7_13525001 chr3R_13525001 RAL-894 1789 chr3R 13555665 13555708 chr3R 13555763 13555779 5 92 1.5 0.0 0.8 2.8 114 chr3R 13555665 intergenic not near genes chr3R 13555722 intergenic not near genes chr3R 13555779 intergenic not near genes chr3R_5_13555001 chr3R_13555001 RAL-894 1790 chr3R 13596024 13596061 chr3R 13596126 13596163 8 96 2.0 3.0 2.5 2.3 139 chr3R 13596024 intergenic not near genes chr3R 13596094 intergenic not near genes chr3R 13596163 intergenic not near genes chr3R_8_13595001 chr3R_13595001 RAL-894 1791 chr3R 13598077 13598116 chr3R 13598164 13598203 12 92 2.0 2.5 2.2 3.8 126 chr3R 13598077 intergenic not near genes chr3R 13598140 intergenic not near genes chr3R 13598203 intergenic not near genes chr3R_12_13595001 chr3R_13595001 RAL-894 1792 chr3R 13615180 13615208 chr3R 13615281 13615309 7 100 4.5 3.0 3.8 1.5 129 chr3R 13615180 intergenic not near genes chr3R 13615244 intergenic not near genes chr3R 13615309 intergenic not near genes chr3R_7_13615001 chr3R_13615001 RAL-894 1793 chr3R 13672937 13672975 chr3R 13673020 13673032 9 89 0.5 3.5 2.0 3.0 95 chr3R 13672937 intron Task6 - chr3R 13672984 intron Task6 - chr3R 13673032 intron Task6 - chr3R_9_13670001 chr3R_13670001 RAL-894 1794 chr3R 11988077 11988080 chr3R 13731612 13731615 4 1743535 5.0 23.0 14.0 0.3 1743538 chr3R 11988077 intron mfas - chr3R 12859846 intergenic not near genes chr3R 13731615 intron CG34383 + chr3R_4_12855001 chr3R_12855001 RAL-894 1795 chr3R 13758139 13758167 chr3R 13758234 13758273 4 103 0.0 4.0 2.0 1.3 134 chr3R 13758139 intron CG34383 + chr3R 13758206 intron CG34383 + chr3R 13758273 intron CG34383 + chr3R_4_13755001 chr3R_13755001 RAL-894 1796 chr3R 13763301 13763336 chr3R 13763388 13763429 14 91 4.5 0.5 2.5 4.0 128 chr3R 13763301 3` UTR CG34383 + chr3R 13763365 3` UTR CG34383 + chr3R 13763429 3` UTR CG34383 + chr3R_14_13760001 chr3R_13760001 RAL-894 1797 chr3R 13789552 13789567 chr3R 13789623 13789657 5 82 0.5 1.5 1.0 2.5 105 chr3R 13789552 intergenic not near genes chr3R 13789604 intergenic not near genes chr3R 13789657 intergenic not near genes chr3R_5_13785001 chr3R_13785001 RAL-894 1798 chr3R 13846173 13846204 chr3R 13846284 13846305 4 103 5.5 1.5 3.5 0.9 132 chr3R 13846173 intergenic not near genes chr3R 13846239 intergenic not near genes chr3R 13846305 intergenic not near genes chr3R_4_13845001 chr3R_13845001 RAL-894 1799 chr3R 13975356 13975403 chr3R 13975456 13975480 7 91 3.5 3.0 3.2 1.7 124 chr3R 13975356 intron rdx - chr3R 13975418 intron rdx - chr3R 13975480 intron rdx - chr3R_7_13975001 chr3R_13975001 RAL-894 1800 chr3R 14021629 14021678 chr3R 14023465 14023515 S-element 17 1833 6.5 6.5 6.5 2.3 1886 chr3R 14021629 intron rdx - chr3R 14022572 intron rdx - chr3R 14023515 intron rdx - chr3R_17_14020001 chr3R_14020001 RAL-894 1801 chr3R 14062839 14062877 chr3R 14062917 14062963 11 87 3.0 2.5 2.8 2.9 124 chr3R 14062839 intron foxo + chr3R 14062901 intron foxo + chr3R 14062963 intron foxo + chr3R_11_14060001 chr3R_14060001 RAL-894 1802 chr3R 14067139 14067155 chr3R 14067221 14067254 10 95 3.5 2.0 2.8 2.6 115 chr3R 14067139 exon foxo + chr3R 14067196 intron foxo + chr3R 14067254 intron foxo + chr3R_10_14065001 chr3R_14065001 RAL-894 1803 chr3R 14083390 14083399 chr3R 14083511 14083515 4 120 2.5 0.0 1.2 1.8 125 chr3R 14083390 intron foxo + chr3R 14083452 intron foxo + chr3R 14083515 intron foxo + chr3R_4_14080001 chr3R_14080001 RAL-894 1804 chr3R 14083400 14083421 chr3R 14083509 14083542 6 118 2.0 0.0 1.0 3.0 142 chr3R 14083400 intron foxo + chr3R 14083471 intron foxo + chr3R 14083542 intron foxo + chr3R_6_14080001 chr3R_14080001 RAL-894 1805 chr3R 7773344 7773344 chr3R 14104440 14104440 5 6331096 16.0 2.0 9.0 0.5 6331096 chr3R 7773344 intergenic not near genes chr3R 10938892 intergenic not near genes chr3R 14104440 intergenic CG12402 - chr3R_5_10935001 chr3R_10935001 RAL-894 1806 chr3R 14170144 14170171 chr3R 14170245 14170281 5 108 3.5 2.5 3.0 1.2 137 chr3R 14170144 3` UTR Dop1R1 - chr3R 14170212 3` UTR Dop1R1 - chr3R 14170281 3` UTR Dop1R1 - chr3R_5_14170001 chr3R_14170001 RAL-894 1807 chr3R 14180794 14180840 chr3R 14185579 14185580 F-element 15 4779 4.0 4.5 4.2 2.9 4786 chr3R 14180794 intron Dop1R1 - chr3R 14183187 intron Dop1R1 - chr3R 14185580 intron Dop1R1 - chr3R_15_14180001 chr3R_14180001 RAL-894 1808 chr3R 14193606 14193622 chr3R 14193917 14193933 5 306 0.5 1.0 0.8 2.8 327 chr3R 14193606 intron Dop1R1 - chr3R 14193770 intron Dop1R1 - chr3R 14193933 intron Dop1R1 - chr3R_5_14190001 chr3R_14190001 RAL-894 1809 chr3R 14294017 14294067 chr3R 14294115 14294165 14 96 4.5 4.0 4.2 2.7 148 chr3R 14294017 intron CG12207 + chr3R 14294091 intron CG12207 + chr3R 14294165 intron CG12207 + chr3R_14_14290001 chr3R_14290001 RAL-894 1810 chr3R 14440717 14440755 chr3R 14440803 14440835 10 92 0.5 2.0 1.2 4.5 118 chr3R 14440717 intron cv-c - chr3R 14440776 intron cv-c - chr3R 14440835 intron cv-c - chr3R_10_14440001 chr3R_14440001 RAL-894 1811 chr3R 14527367 14527402 chr3R 14527483 14527519 4 116 4.0 3.0 3.5 0.9 152 chr3R 14527367 intron Pde6 - chr3R 14527443 intron Pde6 - chr3R 14527519 intron Pde6 - chr3R_4_14525001 chr3R_14525001 RAL-894 1812 chr3R 14546062 14546073 chr3R 14546147 14546163 6 89 3.0 4.0 3.5 1.3 101 chr3R 14546062 intron Pde6 - chr3R 14546112 intron Pde6 - chr3R 14546163 intron Pde6 - chr3R_6_14545001 chr3R_14545001 RAL-894 1813 chr3R 14608451 14608471 chr3R 14608563 14608583 4 112 2.5 4.0 3.2 1.0 132 chr3R 14608451 intergenic stumps + chr3R 14608517 intergenic stumps + chr3R 14608583 intergenic not near genes chr3R_4_14605001 chr3R_14605001 RAL-894 1814 chr3R 14616263 14616308 chr3R 14616357 14616404 8 90 2.5 8.5 5.5 1.2 141 chr3R 14616263 intron CG14853 + chr3R 14616334 intron CG14853 + chr3R 14616404 intron CG14853 + chr3R_8_14615001 chr3R_14615001 RAL-894 1815 chr3R 14677657 14677688 chr3R 14677760 14677791 10 102 1.5 4.0 2.8 2.6 134 chr3R 14677657 intron Meltrin - chr3R 14677724 intron Meltrin - chr3R 14677791 intron Meltrin - chr3R_10_14675001 chr3R_14675001 RAL-894 1816 chr3R 14704364 14704410 chr3R 14704461 14704492 13 93 2.5 4.0 3.2 3.1 128 chr3R 14704364 intron kibra - chr3R 14704428 intron kibra - chr3R 14704492 intron kibra - chr3R_13_14700001 chr3R_14700001 RAL-894 1817 chr3R 14760504 14760548 chr3R 14760615 14760656 9 108 2.0 0.0 1.0 4.5 152 chr3R 14760504 intron jvl + chr3R 14760580 intron jvl + chr3R 14760656 intron jvl + chr3R_9_14760001 chr3R_14760001 RAL-894 1818 chr3R 14764556 14764588 chr3R 14764669 14764708 6 119 2.5 3.5 3.0 1.5 152 chr3R 14764556 intron jvl + chr3R 14764632 intron jvl + chr3R 14764708 intron jvl + chr3R_6_14760001 chr3R_14760001 RAL-894 1819 chr3R 14779056 14779097 chr3R 14779156 14779197 12 97 0.0 3.5 1.8 4.3 141 chr3R 14779056 intron jvl + chr3R 14779126 intron jvl + chr3R 14779197 intron jvl + chr3R_12_14775001 chr3R_14775001 RAL-894 1820 chr3R 14821593 14821644 chr3R 14821762 14821810 16 167 7.0 4.0 5.5 2.5 217 chr3R 14821593 intron btsz - chr3R 14821702 intron btsz - chr3R 14821810 intron btsz - chr3R_16_14820001 chr3R_14820001 RAL-894 1821 chr3R 14838026 14838063 chr3R 14838124 14838136 11 92 5.0 4.0 4.5 2.0 110 chr3R 14838026 intron btsz - chr3R 14838081 intron btsz - chr3R 14838136 intron btsz - chr3R_11_14835001 chr3R_14835001 RAL-894 1822 chr3R 14842586 14842599 chr3R 14842660 14842672 5 81 3.5 4.0 3.8 1.0 86 chr3R 14842586 intron btsz - chr3R 14842629 intron btsz - chr3R 14842672 intron btsz - chr3R_5_14840001 chr3R_14840001 RAL-894 1823 chr3R 14847939 14847953 chr3R 14848038 14848052 4 99 1.0 6.0 3.5 0.9 113 chr3R 14847939 intron btsz - chr3R 14847996 intron btsz - chr3R 14848052 intron btsz - chr3R_4_14845001 chr3R_14845001 RAL-894 1824 chr3R 14923695 14923743 chr3R 14923791 14923816 8 92 2.5 3.5 3.0 2.0 121 chr3R 14923695 3` UTR CR45598 - chr3R 14923756 3` UTR CR45598 - chr3R 14923816 intergenic CR45598 - chr3R_8_14920001 chr3R_14920001 RAL-894 1825 chr3R 14925596 14925629 chr3R 14925699 14925732 5 100 4.0 4.5 4.2 1.0 136 chr3R 14925596 intergenic not near genes chr3R 14925664 intergenic not near genes chr3R 14925732 intergenic not near genes chr3R_5_14925001 chr3R_14925001 RAL-894 1826 chr3R 14952176 14952225 chr3R 14952346 14952395 15 167 2.5 2.5 2.5 4.3 219 chr3R 14952176 intergenic not near genes chr3R 14952286 intergenic not near genes chr3R 14952395 intergenic not near genes chr3R_15_14950001 chr3R_14950001 RAL-894 1827 chr3R 15041410 15041420 chr3R 15045198 15045208 Doc 7 3788 0.5 5.5 3.0 1.8 3798 chr3R 15041410 intergenic not near genes chr3R 15043309 intergenic not near genes chr3R 15045208 intergenic not near genes chr3R_7_15040001 chr3R_15040001 RAL-894 1828 chr3R 15041425 15041452 chr3R 15045197 15045237 Doc 10 3785 0.5 5.5 3.0 2.5 3812 chr3R 15041425 intergenic not near genes chr3R 15043331 intergenic not near genes chr3R 15045237 intergenic not near genes chr3R_10_15040001 chr3R_15040001 RAL-894 1829 chr3R 15049438 15049489 chr3R 15049584 15049618 6 141 1.0 2.5 1.8 2.1 180 chr3R 15049438 intergenic not near genes chr3R 15049528 intergenic not near genes chr3R 15049618 intergenic not near genes chr3R_6_15045001 chr3R_15045001 RAL-894 1830 chr3R 15059259 15059479 chr3R 15059473 15059586 BS 10 180 0.0 0.0 0.0 10.0 327 chr3R 15059259 intron dpr9 - chr3R 15059422 intron dpr9 - chr3R 15059586 intron dpr9 - chr3R_10_15055001 chr3R_15055001 RAL-894 1831 chr3R 15078328 15078372 chr3R 15078427 15078472 18 97 2.0 3.5 2.8 4.7 144 chr3R 15078328 intergenic CG6974 - chr3R 15078400 intergenic CG6974 - chr3R 15078472 intergenic CG6974 - chr3R_18_15075001 chr3R_15075001 RAL-894 1832 chr3R 15079786 15079811 chr3R 15080047 15080072 pogo 9 261 6.5 1.0 3.8 1.9 286 chr3R 15079786 3` UTR CG6966 - chr3R 15079929 3` UTR CG6966 - chr3R 15080072 3` UTR CG6966 - chr3R_9_15075001 chr3R_15075001 RAL-894 1833 chr3R 15102480 15102523 chr3R 15109755 15109788 412 9 7274 5.0 3.5 4.2 1.7 7308 chr3R 15102480 intron CG42788 - chr3R 15106134 intron CG42788 - chr3R 15109788 intron CG42788 - chr3R_9_15105001 chr3R_15105001 RAL-894 1834 chr3R 15114899 15114944 chr3R 15114990 15115031 8 88 3.5 3.5 3.5 1.8 132 chr3R 15114899 intron CG42788 - chr3R 15114965 intron CG42788 - chr3R 15115031 intron CG42788 - chr3R_8_15110001 chr3R_15110001 RAL-894 1835 chr3R 15132050 15132082 chr3R 15135109 15135162 Juan 6 3075 5.5 4.0 4.8 1.0 3112 chr3R 15132050 intergenic CG42788 - chr3R 15133606 intergenic not near genes chr3R 15135162 3` UTR CG6912 - chr3R_6_15130001 chr3R_15130001 RAL-894 1836 chr3R 15143904 15143944 chr3R 15144107 15144147 13 202 6.5 2.5 4.5 2.4 243 chr3R 15143904 intron GlyS - chr3R 15144026 intron GlyS - chr3R 15144147 intron GlyS - chr3R_13_15140001 chr3R_15140001 RAL-894 1837 chr3R 15162526 15162558 chr3R 15167314 15167326 F-element 7 4781 6.0 3.0 4.5 1.3 4800 chr3R 15162526 intron Gyc88E + chr3R 15164926 intron Gyc88E + chr3R 15167326 intron Gyc88E + chr3R_7_15160001 chr3R_15160001 RAL-894 1838 chr3R 15249574 15249617 chr3R 15249671 15249714 10 95 2.5 0.5 1.5 4.0 140 chr3R 15249574 intergenic CG6499 - chr3R 15249644 intergenic CG42404 + chr3R 15249714 intergenic CG42404 + chr3R_10_15245001 chr3R_15245001 RAL-894 1839 chr3R 15286987 15286988 chr3R 21907534 21907536 6 6620548 15.0 13.5 14.2 0.4 6620549 chr3R 15286987 intron Tm1 + chr3R 18597262 intron,exon qin +,CG14304 - chr3R 21907536 intergenic CG6678 + chr3R_6_18595001 chr3R_18595001 RAL-894 1840 chr3R 15406136 15406168 chr3R 15406229 15406264 9 92 27.5 22.5 25.0 0.3 128 chr3R 15406136 intron CG6125 - chr3R 15406200 intron CG6125 - chr3R 15406264 intron CG6125 - chr3R_9_15405001 chr3R_15405001 RAL-894 1841 chr3R 15401209 15401262 chr3R 15407852 15407904 10 6651 38.5 30.5 34.5 0.3 6695 chr3R 15401209 3` UTR Rbp + chr3R 15404556 intron CG6125 - chr3R 15407904 intergenic not near genes chr3R_10_15400001 chr3R_15400001 RAL-894 1842 chr3R 15416236 15416275 chr3R 15416335 15416363 7 97 4.0 6.5 5.2 1.1 127 chr3R 15416236 3` UTR Atx2 + chr3R 15416300 3` UTR Atx2 + chr3R 15416363 3` UTR Atx2 + chr3R_7_15415001 chr3R_15415001 RAL-894 1843 chr3R 15439552 15439574 chr3R 15439712 15439723 5 158 4.5 0.0 2.2 1.6 171 chr3R 15439552 intergenic Act88F + chr3R 15439638 intergenic Act88F + chr3R 15439723 intergenic Act88F + chr3R_5_15435001 chr3R_15435001 RAL-894 1844 chr3R 15452276 15452309 chr3R 15452353 15452403 9 91 4.5 7.0 5.8 1.3 127 chr3R 15452276 intron AdamTS-A - chr3R 15452340 intron AdamTS-A - chr3R 15452403 intron AdamTS-A - chr3R_9_15450001 chr3R_15450001 RAL-894 1845 chr3R 15464760 15464778 chr3R 15464862 15464884 4 102 7.5 2.5 5.0 0.7 124 chr3R 15464760 intron AdamTS-A - chr3R 15464822 intron AdamTS-A - chr3R 15464884 intron AdamTS-A - chr3R_4_15460001 chr3R_15460001 RAL-894 1846 chr3R 15601180 15601194 chr3R 15608685 15608736 412 4 7526 3.5 7.5 5.5 0.6 7556 chr3R 15601180 intergenic not near genes chr3R 15604958 intergenic not near genes chr3R 15608736 intergenic not near genes chr3R_4_15600001 chr3R_15600001 RAL-894 1847 chr3R 15635188 15635239 chr3R 15635329 15635366 8 133 0.0 1.0 0.5 5.3 178 chr3R 15635188 intergenic CG43335 + chr3R 15635277 intergenic CG43335 + chr3R 15635366 intergenic CG43335 + chr3R_8_15635001 chr3R_15635001 RAL-894 1848 chr3R 15680618 15680642 chr3R 15681115 15681131 7 491 3.5 1.5 2.5 2.0 513 chr3R 15680618 intron pxb + chr3R 15680874 intron pxb + chr3R 15681131 intron pxb + chr3R_7_15680001 chr3R_15680001 RAL-894 1849 chr3R 15805915 15805941 chr3R 15806060 15806060 4 138 6.5 2.5 4.5 0.7 145 chr3R 15805915 intron alpha-Man-IIb + chr3R 15805988 intron alpha-Man-IIb + chr3R 15806060 intron alpha-Man-IIb + chr3R_4_15805001 chr3R_15805001 RAL-894 1850 chr3R 15892649 15892684 chr3R 15892731 15892785 11 96 2.0 6.5 4.2 2.1 136 chr3R 15892649 intron CG14877 - chr3R 15892717 intron CG14877 - chr3R 15892785 intron CG14877 - chr3R_11_15890001 chr3R_15890001 RAL-894 1851 chr3R 15924196 15924226 chr3R 15924303 15924333 6 104 2.5 7.0 4.8 1.0 137 chr3R 15924196 intron CG4221 + chr3R 15924264 intron CG4221 + chr3R 15924333 intron CG4221 + chr3R_6_15920001 chr3R_15920001 RAL-894 1852 chr3R 15940960 15940989 chr3R 15941045 15941087 6 96 5.0 4.5 4.8 1.0 127 chr3R 15940960 intron Sap47 + chr3R 15941024 intron Sap47 + chr3R 15941087 intron Sap47 + chr3R_6_15940001 chr3R_15940001 RAL-894 1853 chr3R 16013110 16013131 chr3R 16013218 16013226 9 106 12.0 1.0 6.5 1.2 116 chr3R 16013110 intron GATAe + chr3R 16013168 intron GATAe + chr3R 16013226 intron GATAe + chr3R_9_16010001 chr3R_16010001 RAL-894 1854 chr3R 16013141 16013151 chr3R 16013213 16013229 6 94 9.5 1.0 5.2 1.0 88 chr3R 16013141 intron GATAe + chr3R 16013185 intron GATAe + chr3R 16013229 intron GATAe + chr3R_6_16010001 chr3R_16010001 RAL-894 1855 chr3R 16023847 16023888 chr3R 16023944 16023985 6 95 1.5 0.5 1.0 3.0 138 chr3R 16023847 intergenic not near genes chr3R 16023916 intergenic not near genes chr3R 16023985 intergenic not near genes chr3R_6_16020001 chr3R_16020001 RAL-894 1856 chr3R 16033391 16033427 chr3R 16033492 16033528 10 101 5.5 0.5 3.0 2.5 137 chr3R 16033391 intron pnr + chr3R 16033460 intron pnr + chr3R 16033528 intron pnr + chr3R_10_16030001 chr3R_16030001 RAL-894 1857 chr3R 16073422 16073473 chr3R 16073546 16073597 7 124 2.0 1.0 1.5 2.8 175 chr3R 16073422 intron Mhcl - chr3R 16073510 intron Mhcl - chr3R 16073597 intron Mhcl - chr3R_7_16070001 chr3R_16070001 RAL-894 1858 chr3R 16189393 16189441 chr3R 16189811 16189859 invader4 11 421 4.5 1.5 3.0 2.8 466 chr3R 16189393 intron sra + chr3R 16189626 intron sra + chr3R 16189859 intron sra + chr3R_11_16185001 chr3R_16185001 RAL-894 1859 chr3R 16225068 16225118 chr3R 16225173 16225221 12 102 4.0 3.5 3.8 2.5 153 chr3R 16225068 intergenic not near genes chr3R 16225144 intergenic not near genes chr3R 16225221 intergenic tara + chr3R_12_16225001 chr3R_16225001 RAL-894 1860 chr3R 16253515 16253565 chr3R 16253621 16253670 5 100 0.0 2.0 1.0 2.5 155 chr3R 16253515 intron tara + chr3R 16253592 intron tara + chr3R 16253670 intron tara + chr3R_5_16250001 chr3R_16250001 RAL-894 1861 chr3R 16353621 16353636 chr3R 16353924 16353935 4 298 3.5 1.0 2.2 1.2 314 chr3R 16353621 intron CG10311 - chr3R 16353778 intron CG10311 - chr3R 16353935 intron CG10311 - chr3R_4_16350001 chr3R_16350001 RAL-894 1862 chr3R 16472600 16472604 chr3R 16472645 16472649 4 54 6.5 3.5 5.0 0.7 49 chr3R 16472600 5` UTR Gyc-89Da + chr3R 16472624 5` UTR Gyc-89Da + chr3R 16472649 5` UTR Gyc-89Da + chr3R_4_16470001 chr3R_16470001 RAL-894 1863 chr3R 16521189 16521231 chr3R 16521294 16521326 6 103 4.5 2.0 3.2 1.4 137 chr3R 16521189 intron CG42342 + chr3R 16521258 intron CG42342 + chr3R 16521326 intron CG42342 + chr3R_6_16520001 chr3R_16520001 RAL-894 1864 chr3R 16662042 16662085 chr3R 16662149 16662192 13 105 4.5 4.0 4.2 2.5 150 chr3R 16662042 intron Ubx - chr3R 16662117 intron Ubx - chr3R 16662192 intron Ubx - chr3R_13_16660001 chr3R_16660001 RAL-894 1865 chr3R 16743959 16743970 chr3R 16744075 16744083 5 115 7.0 1.5 4.2 1.0 124 chr3R 16743959 intron bxd - chr3R 16744021 intron bxd - chr3R 16744083 intron bxd - chr3R_5_16740001 chr3R_16740001 RAL-894 1866 chr3R 16756307 16756353 chr3R 16762512 16762534 diver 5 6201 0.5 1.0 0.8 2.8 6227 chr3R 16756307 intron bxd - chr3R 16759420 intron bxd - chr3R 16762534 intron bxd - chr3R_5_16755001 chr3R_16755001 RAL-894 1867 chr3R 16820239 16820274 chr3R 16820353 16820388 8 114 4.0 2.5 3.2 1.9 149 chr3R 16820239 intron abd-A - chr3R 16820314 intron abd-A - chr3R 16820388 intron abd-A - chr3R_8_16820001 chr3R_16820001 RAL-894 1868 chr3R 16868704 16868740 chr3R 16868838 16868864 4 129 2.5 1.5 2.0 1.3 160 chr3R 16868704 intron iab-8 - chr3R 16868784 intron iab-8 - chr3R 16868864 intron iab-8 - chr3R_4_16865001 chr3R_16865001 RAL-894 1869 chr3R 17101123 17101129 chr3R 17101223 17101229 5 100 3.0 0.0 1.5 2.0 106 chr3R 17101123 intron cher - chr3R 17101176 intron cher - chr3R 17101229 intron cher - chr3R_5_17100001 chr3R_17100001 RAL-894 1870 chr3R 17121509 17121555 chr3R 17121724 17121761 13 211 4.5 2.5 3.5 2.9 252 chr3R 17121509 intron cher - chr3R 17121635 intron,exon cher -,CG42779 + chr3R 17121761 intron,exon cher -,CG42779 + chr3R_13_17120001 chr3R_17120001 RAL-894 1871 chr3R 17147936 17147938 chr3R 17148035 17148038 5 100 2.5 0.0 1.2 2.3 102 chr3R 17147936 intron m-cup - chr3R 17147987 intron m-cup - chr3R 17148038 intron m-cup - chr3R_5_17145001 chr3R_17145001 RAL-894 1872 chr3R 17294661 17294695 chr3R 17295089 17295136 BS 9 443 2.0 2.5 2.2 2.8 475 chr3R 17294661 intergenic not near genes chr3R 17294898 intergenic not near genes chr3R 17295136 intergenic not near genes chr3R_9_17290001 chr3R_17290001 RAL-894 1873 chr3R 17346670 17346684 chr3R 17348253 17348267 F-element 5 1583 2.5 5.0 3.8 1.0 1597 chr3R 17346670 intron beat-IIa - chr3R 17347468 intron beat-IIa - chr3R 17348267 intron beat-IIa - chr3R_5_17345001 chr3R_17345001 RAL-894 1874 chr3R 17349849 17349864 chr3R 17350219 17350240 4 374 5.5 3.0 4.2 0.8 391 chr3R 17349849 intron beat-IIa - chr3R 17350044 intron beat-IIa - chr3R 17350240 intron beat-IIa - chr3R_4_17350001 chr3R_17350001 RAL-894 1875 chr3R 17365706 17365754 chr3R 17365803 17365852 18 96 3.5 0.5 2.0 6.0 146 chr3R 17365706 intron beat-IIa - chr3R 17365779 5` UTR beat-IIa - chr3R 17365852 5` UTR beat-IIa - chr3R_18_17365001 chr3R_17365001 RAL-894 1876 chr3R 17419384 17419396 chr3R 17419488 17419500 6 104 0.5 0.0 0.2 5.0 116 chr3R 17419384 intergenic CG42834 + chr3R 17419442 intergenic CG42834 + chr3R 17419500 intergenic CG42834 + chr3R_6_17415001 chr3R_17415001 RAL-894 1877 chr3R 17441689 17441734 chr3R 17441787 17441822 7 96 5.0 3.5 4.2 1.3 133 chr3R 17441689 intron CG5873 + chr3R 17441756 intron CG5873 + chr3R 17441822 intron CG5873 + chr3R_7_17440001 chr3R_17440001 RAL-894 1878 chr3R 17443509 17443515 chr3R 17443637 17443643 4 128 18.5 5.0 11.8 0.3 134 chr3R 17443509 intron CG5873 + chr3R 17443576 intron CG5873 + chr3R 17443643 intron CG5873 + chr3R_4_17440001 chr3R_17440001 RAL-894 1879 chr3R 17443521 17443559 chr3R 17443635 17443687 7 122 10.0 4.5 7.2 0.9 166 chr3R 17443521 intron CG5873 + chr3R 17443604 intron CG5873 + chr3R 17443687 intron CG5873 + chr3R_7_17440001 chr3R_17440001 RAL-894 1880 chr3R 17454078 17454113 chr3R 17454320 17454338 6 236 5.0 0.5 2.8 1.6 260 chr3R 17454078 intergenic not near genes chr3R 17454208 intergenic not near genes chr3R 17454338 intergenic not near genes chr3R_6_17450001 chr3R_17450001 RAL-894 1881 chr3R 17461180 17461230 chr3R 17461282 17461307 11 100 2.5 0.5 1.5 4.4 127 chr3R 17461180 intergenic not near genes chr3R 17461244 intergenic not near genes chr3R 17461307 intergenic not near genes chr3R_11_17460001 chr3R_17460001 RAL-894 1882 chr3R 17465310 17465349 chr3R 17465409 17465453 15 96 1.5 5.0 3.2 3.6 143 chr3R 17465310 intergenic not near genes chr3R 17465382 intergenic not near genes chr3R 17465453 intergenic not near genes chr3R_15_17465001 chr3R_17465001 RAL-894 1883 chr3R 17497941 17497992 chr3R 17498047 17498089 7 104 2.0 4.0 3.0 1.8 148 chr3R 17497941 intron Dscam3 - chr3R 17498015 intron Dscam3 - chr3R 17498089 intron Dscam3 - chr3R_7_17495001 chr3R_17495001 RAL-894 1884 chr3R 17638304 17638347 chr3R 17638810 17638853 roo 16 504 5.0 5.5 5.2 2.6 549 chr3R 17638304 intron CG43175 + chr3R 17638578 intron CG43175 + chr3R 17638853 intron,intron CG43175 +,CR45222 + chr3R_16_17635001 chr3R_17635001 RAL-894 1885 chr3R 17645682 17645723 chr3R 17645832 17645873 15 150 5.5 0.5 3.0 3.8 191 chr3R 17645682 intergenic CG43175 + chr3R 17645778 intergenic not near genes chr3R 17645873 intergenic not near genes chr3R_15_17645001 chr3R_17645001 RAL-894 1886 chr3R 17653060 17653111 chr3R 17653170 17653194 4 100 3.0 5.0 4.0 0.8 134 chr3R 17653060 intron,intron CG14322 +,CR45223 - chr3R 17653127 intron,intron CG14322 +,CR45223 - chr3R 17653194 intron,intron CG14322 +,CR45223 - chr3R_4_17650001 chr3R_17650001 RAL-894 1887 chr3R 17734822 17734859 chr3R 17734956 17734992 13 131 4.0 2.0 3.0 3.2 170 chr3R 17734822 intergenic CG14321 + chr3R 17734907 intergenic not near genes chr3R 17734992 intergenic not near genes chr3R_13_17730001 chr3R_17730001 RAL-894 1888 chr3R 17823180 17823229 chr3R 17823277 17823326 17 95 3.0 4.0 3.5 3.8 146 chr3R 17823180 intron tinc + chr3R 17823253 intron tinc + chr3R 17823326 intron tinc + chr3R_17_17820001 chr3R_17820001 RAL-894 1889 chr3R 17845102 17845220 chr3R 17845210 17845273 8 76 1.5 3.0 2.2 2.5 171 chr3R 17845102 intron tinc + chr3R 17845188 intron tinc + chr3R 17845273 intron tinc + chr3R_8_17845001 chr3R_17845001 RAL-894 1890 chr3R 17899071 17899088 chr3R 17899169 17899186 5 98 10.5 3.0 6.8 0.6 115 chr3R 17899071 intron Rim - chr3R 17899128 intron Rim - chr3R 17899186 intron Rim - chr3R_5_17895001 chr3R_17895001 RAL-894 1891 chr3R 18003024 18003027 chr3R 18003134 18003138 4 110 9.0 0.0 4.5 0.7 114 chr3R 18003024 intron cpo + chr3R 18003081 intron cpo + chr3R 18003138 intron cpo + chr3R_4_18000001 chr3R_18000001 RAL-894 1892 chr3R 18041761 18041766 chr3R 18041837 18041852 5 91 2.0 0.0 1.0 2.5 91 chr3R 18041761 intergenic not near genes chr3R 18041806 intergenic not near genes chr3R 18041852 intergenic not near genes chr3R_5_18040001 chr3R_18040001 RAL-894 1893 chr3R 18061425 18061460 chr3R 18061537 18061572 5 112 0.0 0.0 0.0 5.0 147 chr3R 18061425 intergenic not near genes chr3R 18061498 intergenic not near genes chr3R 18061572 intergenic not near genes chr3R_5_18060001 chr3R_18060001 RAL-894 1894 chr3R 18098276 18098290 chr3R 18098373 18098387 5 97 0.0 0.0 0.0 5.0 111 chr3R 18098276 intron sr + chr3R 18098332 intron sr + chr3R 18098387 intron sr + chr3R_5_18095001 chr3R_18095001 RAL-894 1895 chr3R 18143539 18143586 chr3R 18143648 18143695 15 109 2.0 5.5 3.8 3.1 156 chr3R 18143539 intergenic not near genes chr3R 18143617 intergenic not near genes chr3R 18143695 intergenic not near genes chr3R_15_18140001 chr3R_18140001 RAL-894 1896 chr3R 18232794 18232807 chr3R 18232891 18232908 7 98 4.5 2.5 3.5 1.6 114 chr3R 18232794 intergenic not near genes chr3R 18232851 intergenic not near genes chr3R 18232908 intergenic not near genes chr3R_7_18230001 chr3R_18230001 RAL-894 1897 chr3R 18237557 18237600 chr3R 18237658 18237702 12 104 0.5 4.0 2.2 3.8 145 chr3R 18237557 intron repo + chr3R 18237630 intron repo + chr3R 18237702 intron repo + chr3R_12_18235001 chr3R_18235001 RAL-894 1898 chr3R 18319028 18319085 chr3R 18319243 18319297 14 212 3.0 2.0 2.5 4.0 269 chr3R 18319028 intron CG31235 - chr3R 18319162 intron CG31235 - chr3R 18319297 intron CG31235 - chr3R_14_18315001 chr3R_18315001 RAL-894 1899 chr3R 18338979 18339028 chr3R 18339103 18339152 15 123 0.0 2.0 1.0 7.5 173 chr3R 18338979 intron CG15803 - chr3R 18339066 intron CG15803 - chr3R 18339152 intron CG15803 - chr3R_15_18335001 chr3R_18335001 RAL-894 1900 chr3R 18352558 18352608 chr3R 18352671 18352721 12 110 5.0 1.0 3.0 3.0 163 chr3R 18352558 intron CG15803 - chr3R 18352640 intron CG15803 - chr3R 18352721 intron CG15803 - chr3R_12_18350001 chr3R_18350001 RAL-894 1901 chr3R 18464326 18464341 chr3R 18464454 18464500 6 151 0.0 4.5 2.2 1.9 174 chr3R 18464326 intron fru - chr3R 18464413 intron fru - chr3R 18464500 intron fru - chr3R_6_18460001 chr3R_18460001 RAL-894 1902 chr3R 18472279 18472293 chr3R 18472400 18472414 5 121 5.0 6.5 5.8 0.7 135 chr3R 18472279 intron fru - chr3R 18472346 intron fru - chr3R 18472414 intron fru - chr3R_5_18470001 chr3R_18470001 RAL-894 1903 chr3R 18501580 18501621 chr3R 18501681 18501722 14 99 6.5 6.0 6.2 1.9 142 chr3R 18501580 intron fru - chr3R 18501651 intron fru - chr3R 18501722 intron fru - chr3R_14_18500001 chr3R_18500001 RAL-894 1904 chr3R 18606507 18606526 chr3R 18610749 18610778 F-element 7 4250 2.5 6.0 4.2 1.3 4271 chr3R 18606507 intron,intron qin +,CG14304 - chr3R 18608642 intron,intron qin +,CG14304 - chr3R 18610778 intron,intron qin +,CG14304 - chr3R_7_18605001 chr3R_18605001 RAL-894 1905 chr3R 18617695 18617738 chr3R 18617795 18617838 9 99 2.5 4.5 3.5 2.0 143 chr3R 18617695 intron,intron qin +,CG14304 - chr3R 18617766 intron,intron qin +,CG14304 - chr3R 18617838 intron,intron qin +,CG14304 - chr3R_9_18615001 chr3R_18615001 RAL-894 1906 chr3R 18632160 18632190 chr3R 18633378 18633402 6 1218 6.5 23.5 15.0 0.4 1242 chr3R 18632160 intron,intron qin +,CG14301 - chr3R 18632781 intron,intron qin +,CG14301 - chr3R 18633402 intron,intron qin +,CG14301 - chr3R_6_18630001 chr3R_18630001 RAL-894 1907 chr3R 18697534 18697588 chr3R 18697632 18697686 14 96 3.5 5.0 4.2 2.7 152 chr3R 18697534 intergenic not near genes chr3R 18697610 intergenic not near genes chr3R 18697686 intergenic not near genes chr3R_14_18695001 chr3R_18695001 RAL-894 1908 chr3R 18703017 18703062 chr3R 18703114 18703159 17 96 2.0 3.5 2.8 4.5 142 chr3R 18703017 intergenic not near genes chr3R 18703088 intergenic not near genes chr3R 18703159 intergenic not near genes chr3R_17_18700001 chr3R_18700001 RAL-894 1909 chr3R 18730006 18730035 chr3R 18730101 18730131 4 94 1.5 0.5 1.0 2.0 125 chr3R 18730006 exon Cha + chr3R 18730068 intron Cha + chr3R 18730131 exon Cha + chr3R_4_18730001 chr3R_18730001 RAL-894 1910 chr3R 18766772 18766807 chr3R 18766854 18766901 5 90 2.0 2.0 2.0 1.7 129 chr3R 18766772 intron CG7720 - chr3R 18766836 intron CG7720 - chr3R 18766901 intron CG7720 - chr3R_5_18765001 chr3R_18765001 RAL-894 1911 chr3R 18895535 18895577 chr3R 18895640 18895682 13 103 4.0 3.0 3.5 2.9 147 chr3R 18895535 intergenic not near genes chr3R 18895608 intergenic not near genes chr3R 18895682 intergenic not near genes chr3R_13_18895001 chr3R_18895001 RAL-894 1912 chr3R 19205597 19205633 chr3R 19205690 19205734 4 98 2.5 2.5 2.5 1.1 137 chr3R 19205597 intergenic not near genes chr3R 19205666 intergenic not near genes chr3R 19205734 intergenic not near genes chr3R_4_19205001 chr3R_19205001 RAL-894 1913 chr3R 19276936 19276949 chr3R 19277012 19277049 6 96 5.0 4.5 4.8 1.0 113 chr3R 19276936 intergenic not near genes chr3R 19276992 intergenic not near genes chr3R 19277049 intergenic not near genes chr3R_6_19275001 chr3R_19275001 RAL-894 1914 chr3R 19345709 19345756 chr3R 19345885 19345932 23 175 1.0 3.0 2.0 7.7 223 chr3R 19345709 intergenic not near genes chr3R 19345820 intergenic not near genes chr3R 19345932 intergenic not near genes chr3R_23_19345001 chr3R_19345001 RAL-894 1915 chr3R 19426059 19426100 chr3R 19426253 19426255 8 186 4.5 2.5 3.5 1.8 196 chr3R 19426059 intron CG31221 + chr3R 19426157 intron CG31221 + chr3R 19426255 intron CG31221 + chr3R_8_19425001 chr3R_19425001 RAL-894 1916 chr3R 19440217 19440234 chr3R 19440317 19440323 6 95 5.5 2.0 3.8 1.2 106 chr3R 19440217 intron CG31221 + chr3R 19440270 intron CG31221 + chr3R 19440323 intron CG31221 + chr3R_6_19440001 chr3R_19440001 RAL-894 1917 chr3R 19475610 19475639 chr3R 19475743 19475749 5 128 7.5 3.0 5.2 0.8 139 chr3R 19475610 intron Dys + chr3R 19475680 intron Dys + chr3R 19475749 intron Dys + chr3R_5_19475001 chr3R_19475001 RAL-894 1918 chr3R 19475641 19475653 chr3R 19475741 19475752 5 113 6.0 2.5 4.2 1.0 111 chr3R 19475641 intron Dys + chr3R 19475696 intron Dys + chr3R 19475752 intron Dys + chr3R_5_19475001 chr3R_19475001 RAL-894 1919 chr3R 19602741 19602793 chr3R 19602834 19602872 12 92 4.0 3.0 3.5 2.7 131 chr3R 19602741 intergenic CG7333 + chr3R 19602806 intergenic CG7333 + chr3R 19602872 intergenic CG7333 + chr3R_12_19600001 chr3R_19600001 RAL-894 1920 chr3R 19633272 19633321 chr3R 19633378 19633427 13 102 0.0 4.5 2.2 4.1 155 chr3R 19633272 intergenic subdued - chr3R 19633350 intergenic subdued - chr3R 19633427 3` UTR subdued - chr3R_13_19630001 chr3R_19630001 RAL-894 1921 chr3R 19981439 19981452 chr3R 19981539 19981552 6 100 0.0 2.5 1.2 2.7 113 chr3R 19981439 intron Hs6st - chr3R 19981496 intron Hs6st - chr3R 19981552 intron Hs6st - chr3R_6_19980001 chr3R_19980001 RAL-894 1922 chr3R 19989828 19989837 chr3R 19989928 19989936 4 98 9.5 2.5 6.0 0.6 108 chr3R 19989828 intron Hs6st - chr3R 19989882 intron Hs6st - chr3R 19989936 intron Hs6st - chr3R_4_19985001 chr3R_19985001 RAL-894 1923 chr3R 20087119 20087163 chr3R 20087233 20087277 6 114 2.5 0.0 1.2 2.7 158 chr3R 20087119 intergenic not near genes chr3R 20087198 intergenic not near genes chr3R 20087277 intergenic not near genes chr3R_6_20085001 chr3R_20085001 RAL-894 1924 chr3R 20097415 20097466 chr3R 20097537 20097583 9 118 2.5 5.0 3.8 1.9 168 chr3R 20097415 intergenic not near genes chr3R 20097499 intergenic not near genes chr3R 20097583 intergenic not near genes chr3R_9_20095001 chr3R_20095001 RAL-894 1925 chr3R 20109542 20109570 chr3R 20114768 20114796 copia 7 5224 1.0 3.5 2.2 2.2 5254 chr3R 20109542 intergenic not near genes chr3R 20112169 intergenic not near genes chr3R 20114796 intergenic CG10887 + chr3R_7_20110001 chr3R_20110001 RAL-894 1926 chr3R 20156701 20156708 chr3R 20165861 20165877 roo 7 9176 7.0 6.0 6.5 0.9 9176 chr3R 20156701 intergenic not near genes chr3R 20161289 intergenic not near genes chr3R 20165877 intergenic not near genes chr3R_7_20160001 chr3R_20160001 RAL-894 1927 chr3R 20156712 20156717 chr3R 20165858 20165892 roo 5 9176 6.5 5.0 5.8 0.7 9180 chr3R 20156712 intergenic not near genes chr3R 20161302 intergenic not near genes chr3R 20165892 intergenic not near genes chr3R_5_20160001 chr3R_20160001 RAL-894 1928 chr3R 20205547 20205590 chr3R 20205689 20205732 9 141 2.0 4.5 3.2 2.1 185 chr3R 20205547 intron Nlg4 + chr3R 20205640 intron Nlg4 + chr3R 20205732 intron Nlg4 + chr3R_9_20205001 chr3R_20205001 RAL-894 1929 chr3R 20228680 20228691 chr3R 20228779 20228790 6 99 31.0 38.5 34.8 0.2 110 chr3R 20228680 intron Nlg4 + chr3R 20228735 intron Nlg4 + chr3R 20228790 intron Nlg4 + chr3R_6_20225001 chr3R_20225001 RAL-894 1930 chr3R 20228679 20228695 chr3R 20228794 20228830 21 102 31.5 33.0 32.2 0.6 151 chr3R 20228679 intron Nlg4 + chr3R 20228754 intron Nlg4 + chr3R 20228830 intron Nlg4 + chr3R_21_20225001 chr3R_20225001 RAL-894 1931 chr3R 20245259 20245276 chr3R 20248890 20248907 F-element 4 3631 8.0 5.0 6.5 0.5 3648 chr3R 20245259 3` UTR Nlg4 + chr3R 20247083 intergenic not near genes chr3R 20248907 intergenic not near genes chr3R_4_20245001 chr3R_20245001 RAL-894 1932 chr3R 20245278 20245300 chr3R 20248889 20248926 F-element 8 3628 3.5 5.0 4.2 1.5 3648 chr3R 20245278 3` UTR Nlg4 + chr3R 20247102 intergenic not near genes chr3R 20248926 intergenic not near genes chr3R_8_20245001 chr3R_20245001 RAL-894 1933 chr3R 20252238 20252252 chr3R 20252310 20252350 10 94 0.0 0.0 0.0 10.0 112 chr3R 20252238 intergenic not near genes chr3R 20252294 intergenic cic + chr3R 20252350 intergenic cic + chr3R_10_20250001 chr3R_20250001 RAL-894 1934 chr3R 20256844 20256868 chr3R 20256942 20256956 12 96 0.5 14.0 7.2 1.5 112 chr3R 20256844 intron cic + chr3R 20256900 intron cic + chr3R 20256956 intron cic + chr3R_12_20255001 chr3R_20255001 RAL-894 1935 chr3R 20266502 20266510 chr3R 20272993 20273001 Burdock 4 6491 0.5 10.0 5.2 0.6 6499 chr3R 20266502 intron cic + chr3R 20269752 intron cic + chr3R 20273001 intron cic + chr3R_4_20265001 chr3R_20265001 RAL-894 1936 chr3R 20266512 20266545 chr3R 20272992 20273025 Burdock 11 6486 0.0 9.0 4.5 2.0 6513 chr3R 20266512 intron cic + chr3R 20269768 intron cic + chr3R 20273025 intron cic + chr3R_11_20265001 chr3R_20265001 RAL-894 1937 chr3R 20282256 20282305 chr3R 20282352 20282401 7 93 2.0 1.5 1.8 2.5 145 chr3R 20282256 intron cic + chr3R 20282328 intron cic + chr3R 20282401 intron cic + chr3R_7_20280001 chr3R_20280001 RAL-894 1938 chr3R 20312845 20312882 chr3R 20312940 20312988 8 102 6.5 5.5 6.0 1.1 143 chr3R 20312845 intron CG42668 + chr3R 20312916 intron CG42668 + chr3R 20312988 intron CG42668 + chr3R_8_20310001 chr3R_20310001 RAL-894 1939 chr3R 20330982 20331031 chr3R 20331488 20331510 roo 16 503 5.0 5.5 5.2 2.6 528 chr3R 20330982 intergenic Sirt2 + chr3R 20331246 intergenic Sirt2 + chr3R 20331510 intergenic not near genes chr3R_16_20330001 chr3R_20330001 RAL-894 1940 chr3R 20421513 20421563 chr3R 20421614 20421652 8 95 2.0 3.0 2.5 2.3 139 chr3R 20421513 intron Gfrl - chr3R 20421582 intron Gfrl - chr3R 20421652 intron Gfrl - chr3R_8_20420001 chr3R_20420001 RAL-894 1941 chr3R 20434822 20434860 chr3R 20435027 20435065 9 202 4.0 1.0 2.5 2.6 243 chr3R 20434822 intron Gfrl - chr3R 20434944 intron Gfrl - chr3R 20435065 intron Gfrl - chr3R_9_20430001 chr3R_20430001 RAL-894 1942 chr3R 20482400 20482408 chr3R 20482511 20482519 4 110 0.5 1.5 1.0 2.0 119 chr3R 20482400 intron Gfrl - chr3R 20482460 intron Gfrl - chr3R 20482519 intron Gfrl - chr3R_4_20480001 chr3R_20480001 RAL-894 1943 chr3R 20482410 20482452 chr3R 20482510 20482523 6 91 0.0 1.5 0.8 3.3 113 chr3R 20482410 intron Gfrl - chr3R 20482466 intron Gfrl - chr3R 20482523 intron Gfrl - chr3R_6_20480001 chr3R_20480001 RAL-894 1944 chr3R 20499807 20499839 chr3R 20499896 20499898 10 94 2.0 3.0 2.5 2.9 91 chr3R 20499807 intergenic Dic2 - chr3R 20499852 intergenic Dic2 - chr3R 20499898 intergenic Dic2 - chr3R_10_20495001 chr3R_20495001 RAL-894 1945 chr3R 20512987 20513033 chr3R 20515710 20515756 opus 10 2722 6.0 7.0 6.5 1.3 2769 chr3R 20512987 intergenic not near genes chr3R 20514372 intergenic not near genes chr3R 20515756 intergenic not near genes chr3R_10_20510001 chr3R_20510001 RAL-894 1946 chr3R 20594463 20594511 chr3R 20594573 20594620 11 109 4.5 0.0 2.2 3.4 157 chr3R 20594463 intron bon + chr3R 20594542 intron bon + chr3R 20594620 intron bon + chr3R_11_20590001 chr3R_20590001 RAL-894 1947 chr3R 20596174 20596211 chr3R 20596281 20596318 12 107 3.5 5.5 4.5 2.2 144 chr3R 20596174 intron bon + chr3R 20596246 intron bon + chr3R 20596318 intron bon + chr3R_12_20595001 chr3R_20595001 RAL-894 1948 chr3R 20617494 20617505 chr3R 20617783 20617794 4 289 2.0 0.0 1.0 2.0 300 chr3R 20617494 intergenic CG5466 + chr3R 20617644 intergenic CG5466 + chr3R 20617794 intergenic CG5466 + chr3R_4_20615001 chr3R_20615001 RAL-894 1949 chr3R 20733754 20733779 chr3R 20733861 20733865 6 104 6.5 4.0 5.2 1.0 111 chr3R 20733754 intergenic not near genes chr3R 20733810 intergenic not near genes chr3R 20733865 intergenic not near genes chr3R_6_20730001 chr3R_20730001 RAL-894 1950 chr3R 20787419 20787458 chr3R 20787530 20787569 6 108 0.5 6.5 3.5 1.3 150 chr3R 20787419 intron Syp + chr3R 20787494 intron Syp + chr3R 20787569 intron Syp + chr3R_6_20785001 chr3R_20785001 RAL-894 1951 chr3R 20850069 20850111 chr3R 20850174 20850216 15 103 0.0 4.0 2.0 5.0 147 chr3R 20850069 intergenic RpS30 + chr3R 20850142 intergenic RpS30 + chr3R 20850216 intergenic RpS30 + chr3R_15_20850001 chr3R_20850001 RAL-894 1952 chr3R 20899894 20899937 chr3R 20900010 20900053 20 116 2.0 4.0 3.0 5.0 159 chr3R 20899894 intergenic not near genes chr3R 20899974 intergenic not near genes chr3R 20900053 intergenic not near genes chr3R_20_20895001 chr3R_20895001 RAL-894 1953 chr3R 20966123 20966157 chr3R 20966216 20966260 8 101 0.0 6.5 3.2 1.9 137 chr3R 20966123 intron Atpalpha + chr3R 20966192 intron Atpalpha + chr3R 20966260 intron Atpalpha + chr3R_8_20965001 chr3R_20965001 RAL-894 1954 chr3R 21020380 21020431 chr3R 21020476 21020527 12 92 5.0 7.0 6.0 1.7 147 chr3R 21020380 3` UTR Rlip + chr3R 21020454 3` UTR Rlip + chr3R 21020527 3` UTR Rlip + chr3R_12_21020001 chr3R_21020001 RAL-894 1955 chr3R 21049856 21049904 chr3R 21050069 21050117 7 213 4.0 2.0 3.0 1.8 261 chr3R 21049856 intergenic CG17279 - chr3R 21049986 intergenic CG17279 - chr3R 21050117 exon CG17279 - chr3R_7_21045001 chr3R_21045001 RAL-894 1956 chr3R 21061140 21061177 chr3R 21061236 21061273 15 95 5.0 6.0 5.5 2.3 133 chr3R 21061140 intergenic Mvl - chr3R 21061206 intergenic Mvl -,Cortactin - chr3R 21061273 intergenic Cortactin -,Mvl - chr3R_15_21060001 chr3R_21060001 RAL-894 1957 chr3R 21076320 21076342 chr3R 21076419 21076441 5 95 0.0 4.5 2.2 1.6 121 chr3R 21076320 exon dmrt93B + chr3R 21076380 intron dmrt93B + chr3R 21076441 intron dmrt93B + chr3R_5_21075001 chr3R_21075001 RAL-894 1958 chr3R 21107968 21108008 chr3R 21108071 21108096 11 99 4.0 3.0 3.5 2.4 128 chr3R 21107968 5` UTR Sec15 - chr3R 21108032 intergenic Sec15 -,rtet + chr3R 21108096 intergenic Sec15 -,rtet + chr3R_11_21105001 chr3R_21105001 RAL-894 1959 chr3R 21163246 21163280 chr3R 21163325 21163370 11 86 3.5 1.0 2.2 3.4 124 chr3R 21163246 intron SNF4Agamma + chr3R 21163308 intron SNF4Agamma + chr3R 21163370 intron SNF4Agamma + chr3R_11_21160001 chr3R_21160001 RAL-894 1960 chr3R 21188045 21188055 chr3R 21188174 21188175 4 125 0.0 0.0 0.0 4.0 130 chr3R 21188045 intron SNF4Agamma + chr3R 21188110 intron SNF4Agamma + chr3R 21188175 intron SNF4Agamma + chr3R_4_21185001 chr3R_21185001 RAL-894 1961 chr3R 21188373 21188415 chr3R 21188465 21188475 13 90 4.5 2.0 3.2 3.1 102 chr3R 21188373 intron SNF4Agamma + chr3R 21188424 intron SNF4Agamma + chr3R 21188475 intron SNF4Agamma + chr3R_13_21185001 chr3R_21185001 RAL-894 1962 chr3R 21189675 21189715 chr3R 21189772 21189813 4 98 4.0 3.0 3.5 0.9 138 chr3R 21189675 intron SNF4Agamma + chr3R 21189744 intron SNF4Agamma + chr3R 21189813 intron SNF4Agamma + chr3R_4_21185001 chr3R_21185001 RAL-894 1963 chr3R 21214734 21214758 chr3R 21214926 21214949 5 191 4.0 1.5 2.8 1.3 215 chr3R 21214734 intergenic CG5862 + chr3R 21214842 intergenic CG5862 + chr3R 21214949 intergenic CG5862 + chr3R_5_21210001 chr3R_21210001 RAL-894 1964 chr3R 21274359 21274377 chr3R 21274471 21274485 5 108 7.0 6.0 6.5 0.7 126 chr3R 21274359 3` UTR CG3301 - chr3R 21274422 3` UTR CG3301 - chr3R 21274485 intron CG3301 - chr3R_5_21270001 chr3R_21270001 RAL-894 1965 chr3R 21274382 21274405 chr3R 21274466 21274519 8 96 2.5 4.5 3.5 1.8 137 chr3R 21274382 3` UTR CG3301 - chr3R 21274450 intron CG3301 - chr3R 21274519 3` UTR CG3301 - chr3R_8_21270001 chr3R_21270001 RAL-894 1966 chr3R 21293179 21293228 chr3R 21293311 21293360 19 131 6.0 3.5 4.8 3.3 181 chr3R 21293179 intron SIFaR - chr3R 21293270 intron SIFaR - chr3R 21293360 intron SIFaR - chr3R_19_21290001 chr3R_21290001 RAL-894 1967 chr3R 21464389 21464429 chr3R 21464495 21464533 10 105 1.0 2.0 1.5 4.0 144 chr3R 21464389 intergenic not near genes chr3R 21464461 intergenic not near genes chr3R 21464533 intergenic not near genes chr3R_10_21460001 chr3R_21460001 RAL-894 1968 chr3R 21540217 21540259 chr3R 21540442 21540472 9 216 3.0 1.5 2.2 2.8 255 chr3R 21540217 intergenic not near genes chr3R 21540344 intergenic not near genes chr3R 21540472 intergenic not near genes chr3R_9_21540001 chr3R_21540001 RAL-894 1969 chr3R 21651221 21651267 chr3R 21651319 21651358 11 96 4.5 2.0 3.2 2.6 137 chr3R 21651221 intron E2f - chr3R 21651290 intron E2f - chr3R 21651358 intron E2f - chr3R_11_21650001 chr3R_21650001 RAL-894 1970 chr3R 21907534 21907534 chr3R 28831801 28831802 4 6924268 15.0 8.5 11.8 0.3 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_4_25365001 chr3R_25365001 RAL-894 1971 chr3R 21907536 21907536 chr3R 28831801 28831802 7 6924266 14.5 8.5 11.5 0.6 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_7_25365001 chr3R_25365001 RAL-894 1972 chr3R 21937209 21937230 chr3R 21937306 21937327 10 96 3.0 4.0 3.5 2.2 118 chr3R 21937209 intergenic not near genes chr3R 21937268 intergenic not near genes chr3R 21937327 intergenic not near genes chr3R_10_21935001 chr3R_21935001 RAL-894 1973 chr3R 21983117 21983163 chr3R 21983218 21983262 7 96 1.0 2.0 1.5 2.8 145 chr3R 21983117 intron Eip93F + chr3R 21983190 intron Eip93F + chr3R 21983262 intron Eip93F + chr3R_7_21980001 chr3R_21980001 RAL-894 1974 chr3R 21989095 21989107 chr3R 21989239 21989251 4 144 5.5 0.0 2.8 1.1 156 chr3R 21989095 intron Eip93F + chr3R 21989173 intron Eip93F + chr3R 21989251 intron Eip93F + chr3R_4_21985001 chr3R_21985001 RAL-894 1975 chr3R 21989114 21989121 chr3R 21989233 21989250 4 125 4.0 0.0 2.0 1.3 136 chr3R 21989114 intron Eip93F + chr3R 21989182 intron Eip93F + chr3R 21989250 intron Eip93F + chr3R_4_21985001 chr3R_21985001 RAL-894 1976 chr3R 22013049 22013083 chr3R 22013151 22013185 5 100 2.0 5.0 3.5 1.1 136 chr3R 22013049 intergenic not near genes chr3R 22013117 intergenic not near genes chr3R 22013185 intergenic not near genes chr3R_5_22010001 chr3R_22010001 RAL-894 1977 chr3R 22055563 22055586 chr3R 22055762 22055791 8 205 2.5 5.5 4.0 1.6 228 chr3R 22055563 intron how + chr3R 22055677 intron how + chr3R 22055791 intron how + chr3R_8_22055001 chr3R_22055001 RAL-894 1978 chr3R 22234668 22234705 chr3R 22236007 22236009 pogo 7 1333 2.5 6.0 4.2 1.3 1341 chr3R 22234668 intron SKIP + chr3R 22235338 intron SKIP + chr3R 22236009 intron SKIP + chr3R_7_22235001 chr3R_22235001 RAL-894 1979 chr3R 22234706 22234714 chr3R 22236005 22236036 pogo 5 1322 1.5 6.0 3.8 1.0 1330 chr3R 22234706 intron SKIP + chr3R 22235371 intron SKIP + chr3R 22236036 intron SKIP + chr3R_5_22235001 chr3R_22235001 RAL-894 1980 chr3R 22239473 22239522 chr3R 22248551 22248561 roo 12 9075 3.5 1.5 2.5 3.4 9088 chr3R 22239473 intron SKIP + chr3R 22244017 intron SKIP + chr3R 22248561 intron SKIP + chr3R_12_22240001 chr3R_22240001 RAL-894 1981 chr3R 22330613 22330616 chr3R 22332303 22332332 4 1698 20.5 13.0 16.8 0.2 1719 chr3R 22330613 intergenic CG7080 +,CG33721 + chr3R 22331472 exon CG33721 + chr3R 22332332 exon CG13862 + chr3R_4_22330001 chr3R_22330001 RAL-894 1982 chr3R 22495222 22495246 chr3R 22495330 22495378 6 124 2.5 2.0 2.2 1.9 156 chr3R 22495222 intergenic not near genes chr3R 22495300 intergenic not near genes chr3R 22495378 intergenic not near genes chr3R_6_22495001 chr3R_22495001 RAL-894 1983 chr3R 22525652 22525674 chr3R 22525766 22525788 8 114 8.5 6.0 7.2 1.0 136 chr3R 22525652 intron CG5346 - chr3R 22525720 intron CG5346 - chr3R 22525788 intron CG5346 - chr3R_8_22525001 chr3R_22525001 RAL-894 1984 chr3R 22525678 22525701 chr3R 22525765 22525815 11 111 4.0 5.5 4.8 1.9 137 chr3R 22525678 intron CG5346 - chr3R 22525746 intron CG5346 - chr3R 22525815 intron CG5346 - chr3R_11_22525001 chr3R_22525001 RAL-894 1985 chr3R 22635140 22635174 chr3R 22635437 22635471 9 296 5.0 2.0 3.5 2.0 331 chr3R 22635140 intron loco - chr3R 22635306 intron loco - chr3R 22635471 intron loco - chr3R_9_22635001 chr3R_22635001 RAL-894 1986 chr3R 22670900 22670944 chr3R 22671076 22671092 11 171 1.5 2.5 2.0 3.7 192 chr3R 22670900 intron wake + chr3R 22670996 intron wake + chr3R 22671092 intron wake + chr3R_11_22670001 chr3R_22670001 RAL-894 1987 chr3R 22672287 22672334 chr3R 22672400 22672415 11 108 3.0 3.5 3.2 2.6 128 chr3R 22672287 intron wake + chr3R 22672351 intron wake + chr3R 22672415 intron wake + chr3R_11_22670001 chr3R_22670001 RAL-894 1988 chr3R 22769072 22769123 chr3R 22769167 22769214 12 93 6.0 2.0 4.0 2.4 142 chr3R 22769072 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769143 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769214 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_12_22765001 chr3R_22765001 RAL-894 1989 chr3R 22797746 22797929 chr3R 22797848 22798034 9 108 0.5 0.0 0.2 7.5 288 chr3R 22797746 intergenic not near genes chr3R 22797890 intergenic not near genes chr3R 22798034 intergenic not near genes chr3R_9_22795001 chr3R_22795001 RAL-894 1990 chr3R 22827419 22827445 chr3R 22827501 22827540 6 94 1.5 2.5 2.0 2.0 121 chr3R 22827419 intergenic CR44350 - chr3R 22827480 intergenic CR44350 - chr3R 22827540 intergenic CR44350 - chr3R_6_22825001 chr3R_22825001 RAL-894 1991 chr3R 22881189 22881223 chr3R 22884909 22884948 Doc 5 3723 3.0 1.0 2.0 1.7 3759 chr3R 22881189 intergenic not near genes chr3R 22883068 intergenic not near genes chr3R 22884948 intergenic not near genes chr3R_5_22880001 chr3R_22880001 RAL-894 1992 chr3R 22926823 22926830 chr3R 22926922 22926940 4 106 0.5 6.0 3.2 1.0 117 chr3R 22926823 intron klg + chr3R 22926882 intron klg + chr3R 22926940 intron klg + chr3R_4_22925001 chr3R_22925001 RAL-894 1993 chr3R 22927882 22927904 chr3R 22927995 22928006 4 104 1.5 5.5 3.5 0.9 124 chr3R 22927882 intron klg + chr3R 22927944 intron klg + chr3R 22928006 intron klg + chr3R_4_22925001 chr3R_22925001 RAL-894 1994 chr3R 22974267 22974300 chr3R 22974371 22974372 6 95 0.0 0.0 0.0 6.0 105 chr3R 22974267 intergenic not near genes chr3R 22974320 intergenic not near genes chr3R 22974372 intergenic not near genes chr3R_6_22970001 chr3R_22970001 RAL-894 1995 chr3R 23145159 23145195 chr3R 23145251 23145292 6 92 1.5 5.0 3.2 1.4 133 chr3R 23145159 intergenic not near genes chr3R 23145226 intergenic not near genes chr3R 23145292 intergenic not near genes chr3R_6_23145001 chr3R_23145001 RAL-894 1996 chr3R 23182665 23182705 chr3R 23182768 23182808 21 101 5.0 3.5 4.2 4.0 143 chr3R 23182665 intron Irk1 + chr3R 23182736 intron Irk1 + chr3R 23182808 intron Irk1 + chr3R_21_23180001 chr3R_23180001 RAL-894 1997 chr3R 23225038 23225049 chr3R 23225134 23225145 4 96 5.5 0.0 2.8 1.1 107 chr3R 23225038 intron cnc - chr3R 23225092 intron cnc - chr3R 23225145 intron cnc - chr3R_4_23225001 chr3R_23225001 RAL-894 1998 chr3R 23234831 23234840 chr3R 23234928 23234937 5 97 4.5 3.0 3.8 1.0 106 chr3R 23234831 intron CG4467 - chr3R 23234884 intron CG4467 - chr3R 23234937 intron CG4467 - chr3R_5_23230001 chr3R_23230001 RAL-894 1999 chr3R 23239237 23239284 chr3R 23239352 23239399 11 112 4.0 2.5 3.2 2.6 162 chr3R 23239237 intron CG4467 - chr3R 23239318 intron CG4467 - chr3R 23239399 intron CG4467 - chr3R_11_23235001 chr3R_23235001 RAL-894 2000 chr3R 23319661 23319673 chr3R 23319750 23319772 5 97 0.0 6.0 3.0 1.2 111 chr3R 23319661 intron pnt - chr3R 23319716 intron pnt - chr3R 23319772 intron pnt - chr3R_5_23315001 chr3R_23315001 RAL-894 2001 chr3R 23346830 23346869 chr3R 23346928 23346967 14 97 2.0 3.5 2.8 3.7 137 chr3R 23346830 intergenic not near genes chr3R 23346898 intergenic not near genes chr3R 23346967 intergenic not near genes chr3R_14_23345001 chr3R_23345001 RAL-894 2002 chr3R 23558380 23558411 chr3R 23560181 23560210 Bari1 8 1801 6.0 0.0 3.0 2.0 1830 chr3R 23558380 intron beat-IV + chr3R 23559295 intron beat-IV + chr3R 23560210 intron beat-IV + chr3R_8_23555001 chr3R_23555001 RAL-894 2003 chr3R 23563438 23563466 chr3R 23563548 23563566 6 103 3.0 5.0 4.0 1.2 128 chr3R 23563438 intron beat-IV + chr3R 23563502 intron beat-IV + chr3R 23563566 intron beat-IV + chr3R_6_23560001 chr3R_23560001 RAL-894 2004 chr3R 23564428 23564473 chr3R 23564587 23564637 14 162 2.5 5.0 3.8 2.9 209 chr3R 23564428 intron beat-IV + chr3R 23564532 intron beat-IV + chr3R 23564637 intron beat-IV + chr3R_14_23560001 chr3R_23560001 RAL-894 2005 chr3R 23688451 23688477 chr3R 23688562 23688585 7 109 4.0 1.0 2.5 2.0 134 chr3R 23688451 intergenic SPE + chr3R 23688518 intergenic SPE +,CG10254 - chr3R 23688585 intergenic CG10254 -,SPE + chr3R_7_23685001 chr3R_23685001 RAL-894 2006 chr3R 23713644 23713687 chr3R 23713742 23713746 6 87 2.0 6.0 4.0 1.2 102 chr3R 23713644 intron nau - chr3R 23713695 intron nau - chr3R 23713746 intron nau - chr3R_6_23710001 chr3R_23710001 RAL-894 2007 chr3R 23820630 23820658 chr3R 23820721 23820762 5 98 1.0 1.5 1.2 2.3 132 chr3R 23820630 5` UTR CG34355 + chr3R 23820696 5` UTR CG34355 + chr3R 23820762 5` UTR CG34355 + chr3R_5_23820001 chr3R_23820001 RAL-894 2008 chr3R 23851070 23851090 chr3R 23858757 23858757 opus 7 7684 3.5 13.0 8.2 0.8 7687 chr3R 23851070 3` UTR CG34355 + chr3R 23854914 intergenic not near genes chr3R 23858757 intergenic not near genes chr3R_7_23850001 chr3R_23850001 RAL-894 2009 chr3R 23865009 23865060 chr3R 23865118 23865169 15 106 1.5 6.0 3.8 3.1 160 chr3R 23865009 intron Pli - chr3R 23865089 intron Pli - chr3R 23865169 intron Pli - chr3R_15_23865001 chr3R_23865001 RAL-894 2010 chr3R 23944894 23944929 chr3R 23944999 23945023 6 98 3.0 3.5 3.2 1.4 129 chr3R 23944894 intron CG12268 - chr3R 23944958 intron CG12268 - chr3R 23945023 exon CG12268 - chr3R_6_23940001 chr3R_23940001 RAL-894 2011 chr3R 23949030 23949037 chr3R 23949126 23949134 5 97 10.5 5.0 7.8 0.6 104 chr3R 23949030 intergenic not near genes chr3R 23949082 intergenic not near genes chr3R 23949134 intergenic not near genes chr3R_5_23945001 chr3R_23945001 RAL-894 2012 chr3R 23949039 23949051 chr3R 23949124 23949148 5 93 7.0 4.5 5.8 0.7 109 chr3R 23949039 intergenic not near genes chr3R 23949094 intergenic not near genes chr3R 23949148 intergenic not near genes chr3R_5_23945001 chr3R_23945001 RAL-894 2013 chr3R 23949062 23949066 chr3R 23949119 23949122 4 77 4.5 4.0 4.2 0.8 60 chr3R 23949062 intergenic not near genes chr3R 23949092 intergenic not near genes chr3R 23949122 intergenic not near genes chr3R_4_23945001 chr3R_23945001 RAL-894 2014 chr3R 24021608 24021654 chr3R 24021718 24021764 11 108 6.5 3.5 5.0 1.8 156 chr3R 24021608 intron KrT95D - chr3R 24021686 intron KrT95D - chr3R 24021764 intron KrT95D - chr3R_11_24020001 chr3R_24020001 RAL-894 2015 chr3R 24042022 24042030 chr3R 24042128 24042163 4 124 1.5 5.5 3.5 0.9 141 chr3R 24042022 3` UTR spas + chr3R 24042092 3` UTR spas + chr3R 24042163 3` UTR spas + chr3R_4_24040001 chr3R_24040001 RAL-894 2016 chr3R 24076914 24076949 chr3R 24078381 24078419 hobo 7 1480 2.5 3.5 3.0 1.8 1505 chr3R 24076914 intron 4EHP - chr3R 24077666 intron 4EHP - chr3R 24078419 intron 4EHP - chr3R_7_24075001 chr3R_24075001 RAL-894 2017 chr3R 24117488 24117530 chr3R 24117584 24117602 6 88 4.0 5.0 4.5 1.1 114 chr3R 24117488 intron Rootletin + chr3R 24117545 intron Rootletin + chr3R 24117602 intron Rootletin + chr3R_6_24115001 chr3R_24115001 RAL-894 2018 chr3R 24199719 24199772 chr3R 24199819 24199855 10 96 3.5 0.5 2.0 3.3 136 chr3R 24199719 intron twin - chr3R 24199787 intron twin - chr3R 24199855 intron twin - chr3R_10_24195001 chr3R_24195001 RAL-894 2019 chr3R 24431581 24431595 chr3R 24431680 24431683 4 96 9.5 0.0 4.8 0.7 102 chr3R 24431581 intron nAChRalpha1 - chr3R 24431632 intron nAChRalpha1 - chr3R 24431683 intron nAChRalpha1 - chr3R_4_24430001 chr3R_24430001 RAL-894 2020 chr3R 24431604 24431624 chr3R 24431678 24431723 8 95 4.0 0.0 2.0 2.7 119 chr3R 24431604 intron nAChRalpha1 - chr3R 24431664 intron nAChRalpha1 - chr3R 24431723 intron nAChRalpha1 - chr3R_8_24430001 chr3R_24430001 RAL-894 2021 chr3R 24433483 24433502 chr3R 24433572 24433577 9 92 2.5 6.0 4.2 1.7 94 chr3R 24433483 intron nAChRalpha1 - chr3R 24433530 intron nAChRalpha1 - chr3R 24433577 intron nAChRalpha1 - chr3R_9_24430001 chr3R_24430001 RAL-894 2022 chr3R 24486328 24486361 chr3R 24486525 24486567 7 205 2.0 5.5 3.8 1.5 239 chr3R 24486328 intron nAChRalpha2 + chr3R 24486448 intron nAChRalpha2 + chr3R 24486567 intron nAChRalpha2 + chr3R_7_24485001 chr3R_24485001 RAL-894 2023 chr3R 24493049 24493063 chr3R 24493149 24493169 6 103 8.0 3.5 5.8 0.9 120 chr3R 24493049 intergenic not near genes chr3R 24493109 intergenic not near genes chr3R 24493169 intergenic not near genes chr3R_6_24490001 chr3R_24490001 RAL-894 2024 chr3R 24493270 24493311 chr3R 24493503 24493549 BS 4 242 3.0 2.0 2.5 1.1 279 chr3R 24493270 intergenic not near genes chr3R 24493410 intergenic not near genes chr3R 24493549 intergenic not near genes chr3R_4_24490001 chr3R_24490001 RAL-894 2025 chr3R 24495270 24495319 chr3R 24495369 24495409 10 92 2.0 2.5 2.2 3.1 139 chr3R 24495270 intergenic not near genes chr3R 24495340 intergenic not near genes chr3R 24495409 intergenic not near genes chr3R_10_24495001 chr3R_24495001 RAL-894 2026 chr3R 24527786 24527830 chr3R 24527895 24527941 9 110 3.0 1.0 2.0 3.0 155 chr3R 24527786 intergenic CG13618 +,CG6607 + chr3R 24527864 intergenic CG6607 +,CG13618 + chr3R 24527941 intergenic CG6607 +,CG13618 + chr3R_9_24525001 chr3R_24525001 RAL-894 2027 chr3R 24594657 24594666 chr3R 24594917 24594921 pogo 5 258 6.0 4.5 5.2 0.8 264 chr3R 24594657 intron mld + chr3R 24594789 intron mld + chr3R 24594921 intron mld + chr3R_5_24590001 chr3R_24590001 RAL-894 2028 chr3R 24624354 24624394 chr3R 24624463 24624503 15 106 4.0 1.0 2.5 4.3 149 chr3R 24624354 intron Syx18 - chr3R 24624428 intron Syx18 - chr3R 24624503 exon Syx18 - chr3R_15_24620001 chr3R_24620001 RAL-894 2029 chr3R 24729869 24729905 chr3R 24732689 24732726 Doc 13 2821 1.5 3.5 2.5 3.7 2857 chr3R 24729869 intron tok + chr3R 24731298 intron tok + chr3R 24732726 intron tok + chr3R_13_24730001 chr3R_24730001 RAL-894 2030 chr3R 24743010 24743060 chr3R 24743115 24743164 8 104 1.5 0.0 0.8 4.4 154 chr3R 24743010 intron tok + chr3R 24743087 intron tok + chr3R 24743164 exon tok + chr3R_8_24740001 chr3R_24740001 RAL-894 2031 chr3R 24789963 24790001 chr3R 24790128 24790151 8 159 3.0 1.0 2.0 2.7 188 chr3R 24789963 intron,5` UTR Ets96B +,CG13634 - chr3R 24790057 intron,5` UTR Ets96B +,CG13634 - chr3R 24790151 intron Ets96B + chr3R_8_24790001 chr3R_24790001 RAL-894 2032 chr3R 24854869 24854912 chr3R 24854971 24855013 5 102 2.5 3.0 2.8 1.3 144 chr3R 24854869 3` UTR,3` UTR nct +,HdacX - chr3R 24854941 3` UTR HdacX - chr3R 24855013 3` UTR HdacX - chr3R_5_24850001 chr3R_24850001 RAL-894 2033 chr3R 24893468 24893484 chr3R 24893568 24893579 5 99 1.5 2.0 1.8 1.8 111 chr3R 24893468 intron CG31121 - chr3R 24893524 intron CG31121 - chr3R 24893579 intron CG31121 - chr3R_5_24890001 chr3R_24890001 RAL-894 2034 chr3R 24912467 24912514 chr3R 24912569 24912611 13 101 2.5 3.0 2.8 3.4 144 chr3R 24912467 intergenic not near genes chr3R 24912539 intergenic CR44267 + chr3R 24912611 intergenic CR44267 + chr3R_13_24910001 chr3R_24910001 RAL-894 2035 chr3R 24927112 24927154 chr3R 24931923 24931956 Doc 13 4808 5.0 3.0 4.0 2.6 4844 chr3R 24927112 intergenic Trf4-2 + chr3R 24929534 intergenic not near genes chr3R 24931956 intergenic CG11771 + chr3R_13_24925001 chr3R_24925001 RAL-894 2036 chr3R 24974897 24974927 chr3R 24974996 24975024 6 98 3.0 2.0 2.5 1.7 127 chr3R 24974897 intergenic not near genes chr3R 24974960 intergenic not near genes chr3R 24975024 intergenic not near genes chr3R_6_24970001 chr3R_24970001 RAL-894 2037 chr3R 25027518 25027565 chr3R 25027751 25027791 15 229 1.0 7.0 4.0 3.0 273 chr3R 25027518 intron Hr96 + chr3R 25027654 intron Hr96 + chr3R 25027791 intron Hr96 + chr3R_15_25025001 chr3R_25025001 RAL-894 2038 chr3R 25086858 25086900 chr3R 25087073 25087115 18 214 3.0 1.0 2.0 6.0 257 chr3R 25086858 intergenic not near genes chr3R 25086986 intergenic not near genes chr3R 25087115 intergenic not near genes chr3R_18_25085001 chr3R_25085001 RAL-894 2039 chr3R 25159491 25159533 chr3R 25159593 25159641 12 98 0.5 1.0 0.8 6.7 150 chr3R 25159491 intergenic not near genes chr3R 25159566 intergenic not near genes chr3R 25159641 intergenic not near genes chr3R_12_25155001 chr3R_25155001 RAL-894 2040 chr3R 25166233 25166395 chr3R 25166333 25166491 17 95 0.5 0.0 0.2 14.2 258 chr3R 25166233 intergenic not near genes chr3R 25166362 intergenic not near genes chr3R 25166491 intergenic not near genes chr3R_17_25165001 chr3R_25165001 RAL-894 2041 chr3R 25209580 25209620 chr3R 25209682 25209722 9 98 1.0 3.5 2.2 2.8 142 chr3R 25209580 intron CG13654 + chr3R 25209651 intron CG13654 + chr3R 25209722 intron CG13654 + chr3R_9_25205001 chr3R_25205001 RAL-894 2042 chr3R 25368457 25368505 chr3R 25368595 25368616 8 132 2.0 0.0 1.0 4.0 159 chr3R 25368457 intron Fur1 - chr3R 25368536 intron Fur1 - chr3R 25368616 intron Fur1 - chr3R_8_25365001 chr3R_25365001 RAL-894 2043 chr3R 25517191 25517240 chr3R 25517291 25517345 18 104 1.0 6.0 3.5 4.0 154 chr3R 25517191 intron msi + chr3R 25517268 intron msi + chr3R 25517345 intron msi + chr3R_18_25515001 chr3R_25515001 RAL-894 2044 chr3R 7773344 7773344 chr3R 25538123 25538125 14 17764780 16.0 8.5 12.2 1.1 17764781 chr3R 7773344 intergenic not near genes chr3R 16655734 intergenic modSP - chr3R 25538125 intron msi + chr3R_14_16655001 chr3R_16655001 RAL-894 2045 chr3R 25591388 25591437 chr3R 25591486 25591535 13 95 1.0 0.0 0.5 8.7 147 chr3R 25591388 intron msi + chr3R 25591462 intron msi + chr3R 25591535 intron,3` UTR msi +,ymp - chr3R_13_25590001 chr3R_25590001 RAL-894 2046 chr3R 25614677 25614722 chr3R 25614777 25614796 8 96 4.0 1.0 2.5 2.3 119 chr3R 25614677 intron Npl4 - chr3R 25614736 intron Npl4 - chr3R 25614796 intron Npl4 - chr3R_8_25610001 chr3R_25610001 RAL-894 2047 chr3R 25689125 25689148 chr3R 25689233 25689251 6 115 3.0 2.5 2.8 1.6 126 chr3R 25689125 intergenic not near genes chr3R 25689188 intergenic not near genes chr3R 25689251 intergenic not near genes chr3R_6_25685001 chr3R_25685001 RAL-894 2048 chr3R 25725811 25725860 chr3R 25734991 25735040 roo 12 9178 6.0 2.5 4.2 2.3 9229 chr3R 25725811 intron LpR2 - chr3R 25730426 intron LpR2 - chr3R 25735040 intron LpR2 - chr3R_12_25730001 chr3R_25730001 RAL-894 2049 chr3R 25765859 25765907 chr3R 25765957 25765990 8 94 4.5 2.0 3.2 1.9 131 chr3R 25765859 intergenic not near genes chr3R 25765924 intergenic not near genes chr3R 25765990 intergenic not near genes chr3R_8_25765001 chr3R_25765001 RAL-894 2050 chr3R 25843620 25843664 chr3R 25843770 25843814 18 148 2.0 7.5 4.8 3.1 194 chr3R 25843620 intergenic CR45653 + chr3R 25843717 intergenic CR45653 + chr3R 25843814 intergenic CR45653 + chr3R_18_25840001 chr3R_25840001 RAL-894 2051 chr3R 25846532 25846568 chr3R 25846619 25846667 12 93 0.0 1.0 0.5 8.0 135 chr3R 25846532 intergenic CR45654 +,CR45655 + chr3R 25846600 intergenic CR45655 +,CR45654 + chr3R 25846667 intergenic CR45655 +,CR45654 + chr3R_12_25845001 chr3R_25845001 RAL-894 2052 chr3R 25869212 25869240 chr3R 25869426 25869454 11 214 5.0 9.5 7.2 1.3 242 chr3R 25869212 intron CG5890 + chr3R 25869333 intron CG5890 + chr3R 25869454 intron CG5890 + chr3R_11_25865001 chr3R_25865001 RAL-894 2053 chr3R 25982065 25982109 chr3R 25982173 25982215 10 107 2.0 3.5 2.8 2.6 150 chr3R 25982065 3` UTR CG42261 + chr3R 25982140 3` UTR CG42261 + chr3R 25982215 3` UTR CG42261 + chr3R_10_25980001 chr3R_25980001 RAL-894 2054 chr3R 25983681 25983723 chr3R 25983797 25983805 9 111 1.5 4.0 2.8 2.4 124 chr3R 25983681 exon Nf1 + chr3R 25983743 intron Nf1 + chr3R 25983805 intron Nf1 + chr3R_9_25980001 chr3R_25980001 RAL-894 2055 chr3R 26013839 26013862 chr3R 26013934 26013961 10 98 2.5 2.0 2.2 3.1 122 chr3R 26013839 intergenic not near genes chr3R 26013900 intergenic not near genes chr3R 26013961 intergenic not near genes chr3R_10_26010001 chr3R_26010001 RAL-894 2056 chr3R 26063176 26063221 chr3R 26063290 26063335 10 112 4.0 0.0 2.0 3.3 159 chr3R 26063176 intergenic CG14551 - chr3R 26063256 intergenic CG14551 - chr3R 26063335 intergenic CG14551 - chr3R_10_26060001 chr3R_26060001 RAL-894 2057 chr3R 26075423 26075425 chr3R 26075514 26075530 4 102 9.5 4.0 6.8 0.5 107 chr3R 26075423 intergenic not near genes chr3R 26075476 intergenic not near genes chr3R 26075530 intergenic not near genes chr3R_4_26075001 chr3R_26075001 RAL-894 2058 chr3R 26122441 26122476 chr3R 26122537 26122571 6 90 4.0 6.5 5.2 1.0 130 chr3R 26122441 intron CG31324 + chr3R 26122506 intron CG31324 + chr3R 26122571 intron CG31324 + chr3R_6_26120001 chr3R_26120001 RAL-894 2059 chr3R 26140513 26140524 chr3R 26140646 26140650 5 131 5.5 8.5 7.0 0.6 137 chr3R 26140513 intergenic not near genes chr3R 26140582 intergenic not near genes chr3R 26140650 intergenic not near genes chr3R_5_26140001 chr3R_26140001 RAL-894 2060 chr3R 26140529 26140538 chr3R 26140644 26140671 9 126 4.5 8.0 6.2 1.2 142 chr3R 26140529 intergenic not near genes chr3R 26140600 intergenic not near genes chr3R 26140671 intergenic not near genes chr3R_9_26140001 chr3R_26140001 RAL-894 2061 chr3R 26140539 26140546 chr3R 26140627 26140679 4 112 4.5 5.5 5.0 0.7 140 chr3R 26140539 intergenic not near genes chr3R 26140609 intergenic not near genes chr3R 26140679 intergenic not near genes chr3R_4_26140001 chr3R_26140001 RAL-894 2062 chr3R 26144426 26144478 chr3R 26144524 26144573 12 88 3.5 4.5 4.0 2.4 147 chr3R 26144426 intergenic not near genes chr3R 26144500 intergenic not near genes chr3R 26144573 intergenic not near genes chr3R_12_26140001 chr3R_26140001 RAL-894 2063 chr3R 26165335 26165360 chr3R 26165431 26165444 7 109 1.5 2.5 2.0 2.3 109 chr3R 26165335 intergenic not near genes chr3R 26165390 intergenic not near genes chr3R 26165444 intergenic not near genes chr3R_7_26165001 chr3R_26165001 RAL-894 2064 chr3R 26166159 26166203 chr3R 26166265 26166308 13 101 3.5 3.0 3.2 3.1 149 chr3R 26166159 intergenic not near genes chr3R 26166234 intergenic not near genes chr3R 26166308 intergenic not near genes chr3R_13_26165001 chr3R_26165001 RAL-894 2065 chr3R 26235512 26235522 chr3R 26235574 26235604 7 77 1.5 1.5 1.5 2.8 92 chr3R 26235512 5` UTR CR42745 + chr3R 26235558 5` UTR CR42745 + chr3R 26235604 5` UTR CR42745 + chr3R_7_26235001 chr3R_26235001 RAL-894 2066 chr3R 26292096 26292131 chr3R 26292183 26292231 11 99 4.0 1.5 2.8 2.9 135 chr3R 26292096 intergenic not near genes chr3R 26292164 intergenic not near genes chr3R 26292231 intergenic not near genes chr3R_11_26290001 chr3R_26290001 RAL-894 2067 chr3R 26301815 26301857 chr3R 26301916 26301953 11 100 5.0 5.5 5.2 1.8 138 chr3R 26301815 intergenic not near genes chr3R 26301884 intergenic not near genes chr3R 26301953 intergenic not near genes chr3R_11_26300001 chr3R_26300001 RAL-894 2068 chr3R 26302094 26302146 chr3R 26302321 26302373 16 222 4.0 3.0 3.5 3.6 279 chr3R 26302094 intergenic not near genes chr3R 26302234 intergenic not near genes chr3R 26302373 intergenic not near genes chr3R_16_26300001 chr3R_26300001 RAL-894 2069 chr3R 26374825 26374853 chr3R 26374947 26374965 10 120 5.5 3.0 4.2 1.9 140 chr3R 26374825 intergenic not near genes chr3R 26374895 intergenic not near genes chr3R 26374965 intergenic not near genes chr3R_10_26370001 chr3R_26370001 RAL-894 2070 chr3R 26376311 26376348 chr3R 26385491 26385502 roo 5 9172 2.5 4.0 3.2 1.2 9191 chr3R 26376311 intergenic not near genes chr3R 26380906 intergenic not near genes chr3R 26385502 intergenic not near genes chr3R_5_26380001 chr3R_26380001 RAL-894 2071 chr3R 26405899 26405939 chr3R 26405995 26406034 11 95 0.0 1.5 0.8 6.1 135 chr3R 26405899 intergenic not near genes chr3R 26405966 intergenic not near genes chr3R 26406034 intergenic not near genes chr3R_11_26405001 chr3R_26405001 RAL-894 2072 chr3R 26558149 26558196 chr3R 26558253 26558300 11 96 2.0 6.5 4.2 2.1 151 chr3R 26558149 intron scrib + chr3R 26558224 intron scrib + chr3R 26558300 intron scrib + chr3R_11_26555001 chr3R_26555001 RAL-894 2073 chr3R 26558330 26558361 chr3R 26565647 26565668 Stalker4 8 7314 2.0 2.0 2.0 2.7 7338 chr3R 26558330 intron scrib + chr3R 26561999 intron scrib + chr3R 26565668 intron scrib + chr3R_8_26560001 chr3R_26560001 RAL-894 2074 chr3R 26642737 26642748 chr3R 26643145 26643162 jockey 8 413 7.0 9.0 8.0 0.9 425 chr3R 26642737 intergenic not near genes chr3R 26642950 intergenic not near genes chr3R 26643162 intergenic not near genes chr3R_8_26640001 chr3R_26640001 RAL-894 2075 chr3R 26682597 26682641 chr3R 26682737 26682782 8 140 4.5 1.5 3.0 2.0 185 chr3R 26682597 intergenic not near genes chr3R 26682690 intergenic not near genes chr3R 26682782 intergenic not near genes chr3R_8_26680001 chr3R_26680001 RAL-894 2076 chr3R 26710810 26710821 chr3R 26710914 26710925 7 104 9.5 3.5 6.5 0.9 115 chr3R 26710810 intron amon - chr3R 26710868 intron amon - chr3R 26710925 intron amon - chr3R_7_26710001 chr3R_26710001 RAL-894 2077 chr3R 26710830 26710857 chr3R 26710913 26710955 18 99 5.0 3.0 4.0 3.6 125 chr3R 26710830 intron amon - chr3R 26710892 intron amon - chr3R 26710955 intron amon - chr3R_18_26710001 chr3R_26710001 RAL-894 2078 chr3R 26770220 26770274 chr3R 26770317 26770371 14 95 5.0 4.0 4.5 2.5 151 chr3R 26770220 intergenic CR45563 + chr3R 26770296 intergenic CR45563 + chr3R 26770371 intergenic not near genes chr3R_14_26770001 chr3R_26770001 RAL-894 2079 chr3R 26789591 26789617 chr3R 26789689 26789700 4 94 1.0 0.0 0.5 2.7 109 chr3R 26789591 intergenic not near genes chr3R 26789646 intergenic not near genes chr3R 26789700 intergenic not near genes chr3R_4_26785001 chr3R_26785001 RAL-894 2080 chr3R 26810534 26810581 chr3R 26811039 26811086 roo 6 504 2.5 4.0 3.2 1.4 552 chr3R 26810534 intron Tl + chr3R 26810810 intron Tl + chr3R 26811086 intron Tl + chr3R_6_26810001 chr3R_26810001 RAL-894 2081 chr3R 26895264 26895277 chr3R 26895335 26895383 4 79 4.5 2.0 3.2 1.0 119 chr3R 26895264 intron T48 + chr3R 26895324 intron T48 + chr3R 26895383 intron T48 + chr3R_4_26895001 chr3R_26895001 RAL-894 2082 chr3R 26955122 26955174 chr3R 26955462 26955508 7 332 2.0 2.0 2.0 2.3 386 chr3R 26955122 intron CG6330 - chr3R 26955315 intron CG6330 - chr3R 26955508 intron CG6330 - chr3R_7_26955001 chr3R_26955001 RAL-894 2083 chr3R 27007401 27007432 chr3R 27016545 27016587 roo 9 9150 6.5 2.5 4.5 1.6 9186 chr3R 27007401 intron RYa-R + chr3R 27011994 intron RYa-R + chr3R 27016587 intron RYa-R + chr3R_9_27010001 chr3R_27010001 RAL-894 2084 chr3R 27028714 27028756 chr3R 27028813 27028855 13 99 2.0 1.5 1.8 4.6 141 chr3R 27028714 intron RYa-R + chr3R 27028784 intron RYa-R + chr3R 27028855 intron RYa-R + chr3R_13_27025001 chr3R_27025001 RAL-894 2085 chr3R 27037949 27037989 chr3R 27038075 27038113 14 125 2.0 1.5 1.8 5.0 164 chr3R 27037949 intron RYa-R + chr3R 27038031 intron RYa-R + chr3R 27038113 intron RYa-R + chr3R_14_27035001 chr3R_27035001 RAL-894 2086 chr3R 27200147 27200192 chr3R 27200242 27200263 7 88 1.5 0.5 1.0 3.5 116 chr3R 27200147 intergenic not near genes chr3R 27200205 intergenic not near genes chr3R 27200263 intergenic not near genes chr3R_7_27200001 chr3R_27200001 RAL-894 2087 chr3R 27315978 27316013 chr3R 27316068 27316097 8 88 1.5 0.0 0.8 4.4 119 chr3R 27315978 intron CG3339 - chr3R 27316038 intron CG3339 - chr3R 27316097 exon CG3339 - chr3R_8_27315001 chr3R_27315001 RAL-894 2088 chr3R 27329460 27329488 chr3R 27329557 27329585 8 94 5.5 5.5 5.5 1.2 125 chr3R 27329460 intergenic CG3330 - chr3R 27329522 intergenic CG3330 - chr3R 27329585 intergenic CG3330 - chr3R_8_27325001 chr3R_27325001 RAL-894 2089 chr3R 27342780 27342816 chr3R 27351381 27351416 Tirant 9 8601 2.0 7.0 4.5 1.6 8636 chr3R 27342780 intron CG42534 + chr3R 27347098 intron CG42534 + chr3R 27351416 intron CG42534 + chr3R_9_27345001 chr3R_27345001 RAL-894 2090 chr3R 27452567 27452607 chr3R 27452767 27452807 9 200 2.5 2.0 2.2 2.8 240 chr3R 27452567 intergenic not near genes chr3R 27452687 intergenic not near genes chr3R 27452807 intergenic not near genes chr3R_9_27450001 chr3R_27450001 RAL-894 2091 chr3R 27494304 27494332 chr3R 27494443 27494471 4 139 3.0 3.0 3.0 1.0 167 chr3R 27494304 intergenic not near genes chr3R 27494388 intergenic not near genes chr3R 27494471 intergenic not near genes chr3R_4_27490001 chr3R_27490001 RAL-894 2092 chr3R 27496571 27496599 chr3R 27496696 27496707 5 122 5.0 1.5 3.2 1.2 136 chr3R 27496571 intergenic not near genes chr3R 27496639 intergenic not near genes chr3R 27496707 intergenic not near genes chr3R_5_27495001 chr3R_27495001 RAL-894 2093 chr3R 27521138 27521146 chr3R 27530367 27530375 roo 6 9229 8.5 2.0 5.2 1.0 9237 chr3R 27521138 intron CG12885 + chr3R 27525756 intron CG12885 + chr3R 27530375 intron CG12885 + chr3R_6_27525001 chr3R_27525001 RAL-894 2094 chr3R 27521147 27521187 chr3R 27530366 27530408 roo 14 9228 6.0 2.0 4.0 2.8 9261 chr3R 27521147 intron CG12885 + chr3R 27525778 intron CG12885 + chr3R 27530408 intron CG12885 + chr3R_14_27525001 chr3R_27525001 RAL-894 2095 chr3R 27545664 27545707 chr3R 27545760 27545783 19 92 8.0 2.5 5.2 3.1 119 chr3R 27545664 exon Gr98c + chr3R 27545724 intron Gr98c + chr3R 27545783 exon Gr98c + chr3R_19_27545001 chr3R_27545001 RAL-894 2096 chr3R 27648618 27648869 chr3R 27648671 27648939 5 74 1.5 0.5 1.0 2.5 321 chr3R 27648618 intron tau - chr3R 27648778 intron tau - chr3R 27648939 intron tau - chr3R_5_27645001 chr3R_27645001 RAL-894 2097 chr3R 27679961 27679970 chr3R 27680061 27680113 4 130 1.5 1.5 1.5 1.6 152 chr3R 27679961 3` UTR CG12883 + chr3R 27680037 3` UTR CG12883 + chr3R 27680113 3` UTR CG12883 + chr3R_4_27680001 chr3R_27680001 RAL-894 2098 chr3R 27725551 27725589 chr3R 27731013 27731046 I-element 6 5461 3.5 4.5 4.0 1.2 5495 chr3R 27725551 intergenic not near genes chr3R 27728298 intergenic not near genes chr3R 27731046 intergenic not near genes chr3R_6_27725001 chr3R_27725001 RAL-894 2099 chr3R 27731182 27731229 chr3R 27731279 27731298 6 75 0.5 3.5 2.0 2.0 116 chr3R 27731182 intergenic not near genes chr3R 27731240 intergenic not near genes chr3R 27731298 intergenic not near genes chr3R_6_27730001 chr3R_27730001 RAL-894 2100 chr3R 27737735 27737758 chr3R 27737831 27737870 4 98 7.0 5.5 6.2 0.6 135 chr3R 27737735 intron Ets98B + chr3R 27737802 intron Ets98B + chr3R 27737870 intron Ets98B + chr3R_4_27735001 chr3R_27735001 RAL-894 2101 chr3R 27743535 27743555 chr3R 27743643 27743652 4 102 3.0 3.0 3.0 1.0 117 chr3R 27743535 intron Ets98B + chr3R 27743594 intron Ets98B + chr3R 27743652 intron Ets98B + chr3R_4_27740001 chr3R_27740001 RAL-894 2102 chr3R 27856739 27856787 chr3R 27858240 27858289 hopper2 7 1495 3.0 2.5 2.8 1.8 1550 chr3R 27856739 intron CG34353 - chr3R 27857514 intron CG34353 - chr3R 27858289 intron CG34353 - chr3R_7_27855001 chr3R_27855001 RAL-894 2103 chr3R 27862944 27862958 chr3R 27868269 27868283 Transpac 4 5324 5.5 2.5 4.0 0.8 5339 chr3R 27862944 intron CG34353 - chr3R 27865614 intron CG34353 - chr3R 27868283 intron CG34353 - chr3R_4_27865001 chr3R_27865001 RAL-894 2104 chr3R 27875686 27875721 chr3R 27882759 27882796 297 11 7072 3.0 5.5 4.2 2.1 7110 chr3R 27875686 intron CG34353 - chr3R 27879241 intron CG34353 - chr3R 27882796 intron CG34353 - chr3R_11_27875001 chr3R_27875001 RAL-894 2105 chr3R 27886822 27886850 chr3R 27886918 27886966 11 99 4.0 1.5 2.8 2.9 144 chr3R 27886822 intron CG34353 - chr3R 27886894 intron CG34353 - chr3R 27886966 intron CG34353 - chr3R_11_27885001 chr3R_27885001 RAL-894 2106 chr3R 27911232 27911255 chr3R 27911330 27911353 7 96 1.5 3.5 2.5 2.0 121 chr3R 27911232 intergenic not near genes chr3R 27911292 intergenic not near genes chr3R 27911353 intergenic not near genes chr3R_7_27910001 chr3R_27910001 RAL-894 2107 chr3R 27993167 27993216 chr3R 27993264 27993313 7 89 2.5 4.0 3.2 1.7 146 chr3R 27993167 intergenic not near genes chr3R 27993240 intergenic not near genes chr3R 27993313 intergenic not near genes chr3R_7_27990001 chr3R_27990001 RAL-894 2108 chr3R 28054451 28054470 chr3R 28054524 28054560 6 90 3.5 2.5 3.0 1.5 109 chr3R 28054451 intron CG34362 + chr3R 28054506 intron CG34362 + chr3R 28054560 intron CG34362 + chr3R_6_28050001 chr3R_28050001 RAL-894 2109 chr3R 28068476 28068505 chr3R 28073938 28073949 I-element 5 5456 1.0 2.0 1.5 2.0 5473 chr3R 28068476 intron CG34362 + chr3R 28071212 intron CG34362 + chr3R 28073949 intron CG34362 + chr3R_5_28070001 chr3R_28070001 RAL-894 2110 chr3R 28103314 28103360 chr3R 28103416 28103473 4 110 0.0 1.0 0.5 2.7 159 chr3R 28103314 intergenic not near genes chr3R 28103394 intergenic not near genes chr3R 28103473 intergenic not near genes chr3R_4_28100001 chr3R_28100001 RAL-894 2111 chr3R 28129892 28129916 chr3R 28130001 28130024 4 103 1.5 1.0 1.2 1.8 132 chr3R 28129892 intergenic not near genes chr3R 28129958 intergenic not near genes chr3R 28130024 intergenic not near genes chr3R_4_28125001 chr3R_28125001 RAL-894 2112 chr3R 28173658 28173691 chr3R 28181108 28181141 mdg1 4 7450 3.0 4.5 3.8 0.8 7483 chr3R 28173658 intron CG34354 + chr3R 28177400 intron CG34354 + chr3R 28181141 intron CG34354 + chr3R_4_28175001 chr3R_28175001 RAL-894 2113 chr3R 28253340 28253366 chr3R 28255850 28255881 jockey 9 2520 1.5 1.5 1.5 3.6 2541 chr3R 28253340 intergenic not near genes chr3R 28254610 intergenic not near genes chr3R 28255881 intergenic not near genes chr3R_9_28250001 chr3R_28250001 RAL-894 2114 chr3R 28282972 28283011 chr3R 28283621 28283660 9 644 2.0 8.0 5.0 1.5 688 chr3R 28282972 exon CG34436 + chr3R 28283316 exon CG34436 + chr3R 28283660 intergenic CG34437 +,CG34436 + chr3R_9_28280001 chr3R_28280001 RAL-894 2115 chr3R 28302091 28302131 chr3R 28302550 28302590 jockey 15 457 3.0 8.0 5.5 2.3 499 chr3R 28302091 intergenic not near genes chr3R 28302340 intergenic not near genes chr3R 28302590 intergenic not near genes chr3R_15_28300001 chr3R_28300001 RAL-894 2116 chr3R 28331494 28331527 chr3R 28331593 28331626 16 98 4.0 5.0 4.5 2.9 132 chr3R 28331494 intron larp - chr3R 28331560 intron larp - chr3R 28331626 intron larp - chr3R_16_28330001 chr3R_28330001 RAL-894 2117 chr3R 28393677 28393728 chr3R 28393797 28393848 14 117 1.5 3.5 2.5 4.0 171 chr3R 28393677 intergenic not near genes chr3R 28393762 intergenic not near genes chr3R 28393848 intergenic not near genes chr3R_14_28390001 chr3R_28390001 RAL-894 2118 chr3R 28407686 28407716 chr3R 28407791 28407822 5 95 2.5 2.0 2.2 1.6 136 chr3R 28407686 intergenic not near genes chr3R 28407754 intergenic not near genes chr3R 28407822 intergenic not near genes chr3R_5_28405001 chr3R_28405001 RAL-894 2119 chr3R 28478491 28478517 chr3R 28478571 28478608 6 88 0.5 3.5 2.0 2.0 117 chr3R 28478491 intergenic not near genes chr3R 28478550 intergenic not near genes chr3R 28478608 intergenic not near genes chr3R_6_28475001 chr3R_28475001 RAL-894 2120 chr3R 28479129 28479168 chr3R 28479247 28479271 12 116 1.0 4.5 2.8 3.2 142 chr3R 28479129 intergenic not near genes chr3R 28479200 intergenic not near genes chr3R 28479271 intergenic not near genes chr3R_12_28475001 chr3R_28475001 RAL-894 2121 chr3R 28702917 28702955 chr3R 28703021 28703045 10 101 2.5 2.0 2.2 3.1 128 chr3R 28702917 intron htt + chr3R 28702981 intron htt + chr3R 28703045 intron htt + chr3R_10_28700001 chr3R_28700001 RAL-894 2122 chr3R 28758302 28758319 chr3R 28771329 28771346 Stalker4 5 13027 2.0 0.0 1.0 2.5 13044 chr3R 28758302 intergenic aqrs - chr3R 28764824 intergenic not near genes chr3R 28771346 intergenic not near genes chr3R_5_28760001 chr3R_28760001 RAL-894 2123 chr3R 28772874 28772917 chr3R 28773554 28773587 12 679 4.0 6.0 5.0 2.0 713 chr3R 28772874 intergenic not near genes chr3R 28773230 intergenic not near genes chr3R 28773587 intergenic not near genes chr3R_12_28770001 chr3R_28770001 RAL-894 2124 chr3R 28792866 28792902 chr3R 28797970 28798005 jockey 4 5107 2.0 2.5 2.2 1.2 5139 chr3R 28792866 intergenic not near genes chr3R 28795436 intergenic not near genes chr3R 28798005 intergenic not near genes chr3R_4_28795001 chr3R_28795001 RAL-894 2125 chr3R 28811573 28811604 chr3R 28811739 28811770 6 166 2.0 7.0 4.5 1.1 197 chr3R 28811573 intergenic wdn - chr3R 28811672 intergenic wdn -,CG1646 + chr3R 28811770 intergenic CG1646 +,wdn - chr3R_6_28810001 chr3R_28810001 RAL-894 2126 chr3R 21907534 21907536 chr3R 28831801 28831802 13 6924266 14.5 8.5 11.5 1.0 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_13_25365001 chr3R_25365001 RAL-894 2127 chr3R 28985053 28985089 chr3R 28985175 28985213 7 123 2.0 2.0 2.0 2.3 160 chr3R 28985053 intergenic not near genes chr3R 28985133 intergenic not near genes chr3R 28985213 intergenic not near genes chr3R_7_28985001 chr3R_28985001 RAL-894 2128 chr3R 29004788 29004842 chr3R 29004888 29004942 14 97 3.0 2.5 2.8 3.7 154 chr3R 29004788 intron wat - chr3R 29004865 intron wat - chr3R 29004942 intron wat - chr3R_14_29000001 chr3R_29000001 RAL-894 2129 chr3R 29079362 29079410 chr3R 29080754 29080792 NOF 8 1389 4.5 2.5 3.5 1.8 1430 chr3R 29079362 intron CG11873 + chr3R 29080077 intron CG11873 + chr3R 29080792 intron CG11873 + chr3R_8_29080001 chr3R_29080001 RAL-894 2130 chr3R 29203837 29203851 chr3R 29203937 29203951 4 100 5.0 0.0 2.5 1.1 114 chr3R 29203837 5` UTR CG14508 - chr3R 29203894 intron CG14508 - chr3R 29203951 intron CG14508 - chr3R_4_29200001 chr3R_29200001 RAL-894 2131 chr3R 29213041 29213090 chr3R 29213144 29213193 12 101 3.0 4.0 3.5 2.7 152 chr3R 29213041 intergenic not near genes chr3R 29213117 intergenic not near genes chr3R 29213193 intergenic not near genes chr3R_12_29210001 chr3R_29210001 RAL-894 2132 chr3R 29238774 29238791 chr3R 29238894 29238925 5 126 2.0 6.0 4.0 1.0 151 chr3R 29238774 intergenic CG31427 -,CG11951 - chr3R 29238850 3` UTR CG31427 - chr3R 29238925 3` UTR CG31427 - chr3R_5_29235001 chr3R_29235001 RAL-894 2133 chr3R 29240302 29240343 chr3R 29240395 29240417 8 94 3.5 0.0 1.8 2.9 115 chr3R 29240302 5` UTR CG31427 - chr3R 29240360 5` UTR CG31427 - chr3R 29240417 intergenic CG31427 -,CG31445 - chr3R_8_29240001 chr3R_29240001 RAL-894 2134 chr3R 29249906 29249912 chr3R 29250006 29250022 4 108 9.0 7.0 8.0 0.4 116 chr3R 29249906 intron SP1029 - chr3R 29249964 intron SP1029 - chr3R 29250022 intron SP1029 - chr3R_4_29245001 chr3R_29245001 RAL-894 2135 chr3R 29256254 29256295 chr3R 29256344 29256388 8 95 2.0 1.5 1.8 2.9 134 chr3R 29256254 intergenic CG45544 +,stg - chr3R 29256321 intergenic CG45544 + chr3R 29256388 intergenic CG45544 + chr3R_8_29255001 chr3R_29255001 RAL-894 2136 chr3R 29263506 29263536 chr3R 29263582 29263628 14 90 5.0 1.0 3.0 3.5 122 chr3R 29263506 intergenic not near genes chr3R 29263567 intergenic not near genes chr3R 29263628 intergenic not near genes chr3R_14_29260001 chr3R_29260001 RAL-894 2137 chr3R 29319805 29319854 chr3R 29320144 29320176 jockey 10 332 3.0 3.0 3.0 2.5 371 chr3R 29319805 intergenic Cnx99A - chr3R 29319990 intergenic Cnx99A - chr3R 29320176 intergenic not near genes chr3R_10_29315001 chr3R_29315001 RAL-894 2138 chr3R 29362854 29362884 chr3R 29362945 29362993 11 105 0.0 2.0 1.0 5.5 139 chr3R 29362854 intergenic not near genes chr3R 29362924 intergenic not near genes chr3R 29362993 intergenic not near genes chr3R_11_29360001 chr3R_29360001 RAL-894 2139 chr3R 29406620 29406638 chr3R 29407911 29407944 jockey 7 1299 1.5 2.0 1.8 2.5 1324 chr3R 29406620 intron Ptp99A + chr3R 29407282 intron Ptp99A + chr3R 29407944 intron Ptp99A + chr3R_7_29405001 chr3R_29405001 RAL-894 2140 chr3R 29449356 29449388 chr3R 29449438 29449485 13 92 1.5 3.0 2.2 4.1 129 chr3R 29449356 intron Ptp99A + chr3R 29449420 intron Ptp99A + chr3R 29449485 intron Ptp99A + chr3R_13_29445001 chr3R_29445001 RAL-894 2141 chr3R 29452180 29452182 chr3R 29452244 29452249 4 76 2.0 5.0 3.5 0.9 69 chr3R 29452180 intron Ptp99A + chr3R 29452214 intron Ptp99A + chr3R 29452249 intron Ptp99A + chr3R_4_29450001 chr3R_29450001 RAL-894 2142 chr3R 29474417 29474444 chr3R 29474524 29474551 8 105 5.5 5.0 5.2 1.3 134 chr3R 29474417 intron Ptp99A + chr3R 29474484 intron Ptp99A + chr3R 29474551 intron Ptp99A + chr3R_8_29470001 chr3R_29470001 RAL-894 2143 chr3R 29474448 29474463 chr3R 29474515 29474570 5 93 2.0 3.5 2.8 1.3 122 chr3R 29474448 intron Ptp99A + chr3R 29474509 intron Ptp99A + chr3R 29474570 intron Ptp99A + chr3R_5_29470001 chr3R_29470001 RAL-894 2144 chr3R 29505877 29505923 chr3R 29505974 29506020 10 97 4.0 3.5 3.8 2.1 143 chr3R 29505877 intergenic not near genes chr3R 29505948 intergenic not near genes chr3R 29506020 intergenic not near genes chr3R_10_29505001 chr3R_29505001 RAL-894 2145 chr3R 29566365 29566415 chr3R 29566462 29566511 12 97 2.0 2.5 2.2 3.8 146 chr3R 29566365 intergenic not near genes chr3R 29566438 intergenic not near genes chr3R 29566511 intergenic not near genes chr3R_12_29565001 chr3R_29565001 RAL-894 2146 chr3R 29576726 29576748 chr3R 29576853 29576869 6 124 1.5 0.0 0.8 3.3 143 chr3R 29576726 intergenic not near genes chr3R 29576798 intergenic not near genes chr3R 29576869 intergenic not near genes chr3R_6_29575001 chr3R_29575001 RAL-894 2147 chr3R 29648990 29649013 chr3R 29649100 29649123 6 108 2.5 3.0 2.8 1.6 133 chr3R 29648990 intron Dop1R2 - chr3R 29649056 intron Dop1R2 - chr3R 29649123 intron Dop1R2 - chr3R_6_29645001 chr3R_29645001 RAL-894 2148 chr3R 29738249 29738294 chr3R 29739731 29739773 hobo 9 1482 3.0 1.5 2.2 2.8 1524 chr3R 29738249 intergenic CG1969 +,CG7598 + chr3R 29739011 intron CG1969 + chr3R 29739773 5` UTR CG1969 + chr3R_9_29735001 chr3R_29735001 RAL-894 2149 chr3R 29758927 29758971 chr3R 29759016 29759069 7 97 1.5 5.5 3.5 1.6 142 chr3R 29758927 3` UTR CR44953 - chr3R 29758998 3` UTR CR44953 - chr3R 29759069 intergenic CR44953 - chr3R_7_29755001 chr3R_29755001 RAL-894 2150 chr3R 29760344 29760392 chr3R 29761565 29761593 pogo 17 1219 3.5 4.0 3.8 3.5 1249 chr3R 29760344 intergenic not near genes chr3R 29760968 intergenic not near genes chr3R 29761593 intergenic not near genes chr3R_17_29760001 chr3R_29760001 RAL-894 2151 chr3R 29854819 29854834 chr3R 29854919 29854933 4 98 6.5 5.5 6.0 0.6 114 chr3R 29854819 3` UTR dgt1 - chr3R 29854876 exon dgt1 - chr3R 29854933 exon dgt1 - chr3R_4_29850001 chr3R_29850001 RAL-894 2152 chr3R 29854835 29854861 chr3R 29854908 29854943 5 85 3.0 4.5 3.8 1.0 108 chr3R 29854835 3` UTR dgt1 - chr3R 29854889 exon dgt1 - chr3R 29854943 exon dgt1 - chr3R_5_29850001 chr3R_29850001 RAL-894 2153 chr3R 29882003 29882049 chr3R 29891180 29891226 roo 18 9175 5.5 4.0 4.8 3.1 9223 chr3R 29882003 intron CG31038 + chr3R 29886614 intron CG31038 + chr3R 29891226 intron CG31038 + chr3R_18_29885001 chr3R_29885001 RAL-894 2154 chr3R 29968745 29968787 chr3R 29968944 29968991 9 196 4.0 1.5 2.8 2.4 246 chr3R 29968745 intron TkR99D - chr3R 29968868 intron TkR99D - chr3R 29968991 5` UTR TkR99D - chr3R_9_29965001 chr3R_29965001 RAL-894 2155 chr3R 30013672 30013704 chr3R 30013775 30013777 7 91 0.0 7.5 3.8 1.5 105 chr3R 30013672 intron CG7920 - chr3R 30013724 intron CG7920 - chr3R 30013777 intron CG7920 - chr3R_7_30010001 chr3R_30010001 RAL-894 2156 chr3R 30032150 30032182 chr3R 30032239 30032241 5 85 1.0 3.0 2.0 1.7 91 chr3R 30032150 intron Axn + chr3R 30032196 intron Axn + chr3R 30032241 intron Axn + chr3R_5_30030001 chr3R_30030001 RAL-894 2157 chr3R 30084843 30084875 chr3R 30086314 30086357 hobo 12 1475 1.0 0.5 0.8 6.7 1514 chr3R 30084843 intron sima + chr3R 30085600 intron sima + chr3R 30086357 intron sima + chr3R_12_30085001 chr3R_30085001 RAL-894 2158 chr3R 30112936 30112976 chr3R 30113032 30113072 12 95 2.0 2.0 2.0 4.0 136 chr3R 30112936 intron sima + chr3R 30113004 intron sima + chr3R 30113072 intron sima + chr3R_12_30110001 chr3R_30110001 RAL-894 2159 chr3R 30170662 30170680 chr3R 30170788 30170806 4 126 2.5 1.5 2.0 1.3 144 chr3R 30170662 exon CG31028 - chr3R 30170734 intron CG31028 - chr3R 30170806 intron CG31028 - chr3R_4_30170001 chr3R_30170001 RAL-894 2160 chr3R 30177729 30177767 chr3R 30177866 30177897 4 134 6.0 2.0 4.0 0.8 168 chr3R 30177729 intergenic CG1983 -,CG15530 + chr3R 30177813 intergenic CG15530 +,CG1983 - chr3R 30177897 5` UTR CG15530 + chr3R_4_30175001 chr3R_30175001 RAL-894 2161 chr3R 30210594 30210671 chr3R 30210727 30210771 6 105 0.0 5.5 2.8 1.6 177 chr3R 30210594 intergenic Anp +,CecA1 + chr3R 30210682 intergenic CecA1 +,Anp + chr3R 30210771 intergenic CecA1 +,Anp + chr3R_6_30210001 chr3R_30210001 RAL-894 2162 chr3R 30238741 30238797 chr3R 30239925 30239980 1360 12 1182 1.5 5.0 3.2 2.9 1239 chr3R 30238741 intergenic not near genes chr3R 30239360 intergenic not near genes chr3R 30239980 intergenic not near genes chr3R_12_30235001 chr3R_30235001 RAL-894 2163 chr3R 30262576 30262582 chr3R 30262693 30262699 4 117 0.5 0.5 0.5 2.7 123 chr3R 30262576 intergenic not near genes chr3R 30262638 intergenic not near genes chr3R 30262699 intergenic not near genes chr3R_4_30260001 chr3R_30260001 RAL-894 2164 chr3R 30264455 30264496 chr3R 30264661 30264689 8 200 4.0 0.5 2.2 2.5 234 chr3R 30264455 intergenic not near genes chr3R 30264572 intergenic not near genes chr3R 30264689 intergenic not near genes chr3R_8_30260001 chr3R_30260001 RAL-894 2165 chr3R 7773344 7773344 chr3R 30278264 30278264 5 22504920 16.0 13.5 14.8 0.3 22504920 chr3R 7773344 intergenic not near genes chr3R 19025804 exon CG14285 + chr3R 30278264 5` UTR hdc + chr3R_5_19025001 chr3R_19025001 RAL-894 2166 chr3R 30292756 30292791 chr3R 30292864 30292899 5 108 1.5 5.0 3.2 1.2 143 chr3R 30292756 intron hdc + chr3R 30292828 intron hdc + chr3R 30292899 intron hdc + chr3R_5_30290001 chr3R_30290001 RAL-894 2167 chr3R 30375520 30375569 chr3R 30383165 30383198 412 22 7641 4.0 2.0 3.0 5.5 7678 chr3R 30375520 intergenic not near genes chr3R 30379359 intergenic not near genes chr3R 30383198 intergenic not near genes chr3R_22_30375001 chr3R_30375001 RAL-894 2168 chr3R 30396198 30396244 chr3R 30404484 30404530 roo 12 8279 4.0 3.5 3.8 2.5 8332 chr3R 30396198 intergenic not near genes chr3R 30400364 intergenic not near genes chr3R 30404530 5` UTR CR45570 + chr3R_12_30400001 chr3R_30400001 RAL-894 2169 chr3R 30456395 30456424 chr3R 30456470 30456514 9 92 3.5 5.5 4.5 1.6 119 chr3R 30456395 intergenic CG2224 - chr3R 30456454 3` UTR CG2224 - chr3R 30456514 3` UTR CG2224 - chr3R_9_30455001 chr3R_30455001 RAL-894 2170 chr3R 30458000 30458042 chr3R 30458095 30458142 9 96 5.0 3.0 4.0 1.8 142 chr3R 30458000 intron CG2224 - chr3R 30458071 intron CG2224 - chr3R 30458142 intron CG2224 - chr3R_9_30455001 chr3R_30455001 RAL-894 2171 chr3R 30480462 30480513 chr3R 30482949 30482976 jockey 10 2481 2.0 5.0 3.5 2.2 2514 chr3R 30480462 intron PH4alphaEFB + chr3R 30481719 intron PH4alphaEFB + chr3R 30482976 intron PH4alphaEFB + chr3R_10_30480001 chr3R_30480001 RAL-894 2172 chr3R 30485033 30485063 chr3R 30485129 30485159 13 96 2.5 6.0 4.2 2.5 126 chr3R 30485033 intron PH4alphaEFB + chr3R 30485096 intron PH4alphaEFB + chr3R 30485159 intron PH4alphaEFB + chr3R_13_30485001 chr3R_30485001 RAL-894 2173 chr3R 30548301 30548326 chr3R 30548399 30548423 5 98 2.0 6.0 4.0 1.0 122 chr3R 30548301 intron tmod + chr3R 30548362 intron tmod + chr3R 30548423 intron tmod + chr3R_5_30545001 chr3R_30545001 RAL-894 2174 chr3R 30571704 30571720 chr3R 30571794 30571820 7 98 5.0 2.0 3.5 1.6 116 chr3R 30571704 intron tmod + chr3R 30571762 intron tmod + chr3R 30571820 exon tmod + chr3R_7_30570001 chr3R_30570001 RAL-894 2175 chr3R 30591290 30591337 chr3R 30591397 30591434 8 106 5.0 5.5 5.2 1.3 144 chr3R 30591290 intergenic not near genes chr3R 30591362 intergenic not near genes chr3R 30591434 intergenic not near genes chr3R_8_30590001 chr3R_30590001 RAL-894 2176 chr3R 30627604 30627636 chr3R 30627693 30627703 6 76 1.5 2.0 1.8 2.1 99 chr3R 30627604 3` UTR CG2267 - chr3R 30627654 exon CG2267 - chr3R 30627703 exon CG2267 - chr3R_6_30625001 chr3R_30625001 RAL-894 2177 chr3R 30650797 30650810 chr3R 30650907 30650927 5 116 0.0 1.0 0.5 3.3 130 chr3R 30650797 3` UTR CG34433 + chr3R 30650862 intergenic CG34433 + chr3R 30650927 intergenic CG34433 + chr3R_5_30650001 chr3R_30650001 RAL-894 2178 chr3R 30679505 30679551 chr3R 30686993 30687040 blood 5 7488 1.5 2.5 2.0 1.7 7535 chr3R 30679505 intergenic not near genes chr3R 30683272 intergenic not near genes chr3R 30687040 intergenic not near genes chr3R_5_30680001 chr3R_30680001 RAL-894 2179 chr3R 30690171 30690190 chr3R 30690249 30690293 7 89 2.0 3.5 2.8 1.8 122 chr3R 30690171 intergenic Spn100A + chr3R 30690232 intergenic Spn100A + chr3R 30690293 intergenic Spn100A + chr3R_7_30690001 chr3R_30690001 RAL-894 2180 chr3R 30818790 30818836 chr3R 30820375 30820421 1360 16 1580 4.0 4.0 4.0 3.2 1631 chr3R 30818790 intron cindr + chr3R 30819606 intron cindr + chr3R 30820421 intron cindr + chr3R_16_30815001 chr3R_30815001 RAL-894 2181 chr3R 30821440 30821464 chr3R 30821635 30821657 4 192 4.0 0.5 2.2 1.2 217 chr3R 30821440 intron cindr + chr3R 30821548 intron cindr + chr3R 30821657 intron cindr + chr3R_4_30820001 chr3R_30820001 RAL-894 2182 chr3R 30859387 30859421 chr3R 30859485 30859519 7 98 4.0 1.5 2.8 1.8 132 chr3R 30859387 intergenic not near genes chr3R 30859453 intergenic not near genes chr3R 30859519 intergenic not near genes chr3R_7_30855001 chr3R_30855001 RAL-894 2183 chr3R 30874370 30874417 chr3R 30874472 30874520 10 102 0.5 2.5 1.5 4.0 150 chr3R 30874370 3` UTR CG15546 - chr3R 30874445 3` UTR CG15546 - chr3R 30874520 3` UTR CG15546 - chr3R_10_30870001 chr3R_30870001 RAL-894 2184 chr3R 30900516 30900553 chr3R 30900601 30900653 6 92 3.5 3.0 3.2 1.4 137 chr3R 30900516 exon Cyp4c3 + chr3R 30900584 3` UTR Cyp4c3 + chr3R 30900653 3` UTR Cyp4c3 + chr3R_6_30900001 chr3R_30900001 RAL-894 2185 chr3R 30948104 30948109 chr3R 30948293 30948320 8 202 1.0 4.5 2.8 2.1 216 chr3R 30948104 intergenic not near genes chr3R 30948212 intergenic not near genes chr3R 30948320 intergenic not near genes chr3R_8_30945001 chr3R_30945001 RAL-894 2186 chr3R 30973116 30973158 chr3R 30973297 30973339 6 176 0.5 2.5 1.5 2.4 223 chr3R 30973116 intron 5-HT7 - chr3R 30973228 intron 5-HT7 - chr3R 30973339 intron 5-HT7 - chr3R_6_30970001 chr3R_30970001 RAL-894 2187 chr3R 31042108 31042128 chr3R 31042215 31042222 9 104 6.0 4.0 5.0 1.5 114 chr3R 31042108 intron CanA1 + chr3R 31042165 intron CanA1 + chr3R 31042222 intron CanA1 + chr3R_9_31040001 chr3R_31040001 RAL-894 2188 chr3R 31069638 31069676 chr3R 31069752 31069787 5 110 1.0 2.0 1.5 2.0 149 chr3R 31069638 intron Sox100B + chr3R 31069712 intron Sox100B + chr3R 31069787 intron Sox100B + chr3R_5_31065001 chr3R_31065001 RAL-894 2189 chr3R 31074228 31074261 chr3R 31081827 31081879 springer 8 7616 3.0 2.0 2.5 2.3 7651 chr3R 31074228 intron Sox100B + chr3R 31078054 intron Sox100B + chr3R 31081879 intron Sox100B + chr3R_8_31075001 chr3R_31075001 RAL-894 2190 chr3R 31087094 31087129 chr3R 31087614 31087646 6 514 2.5 3.0 2.8 1.6 552 chr3R 31087094 intergenic not near genes chr3R 31087370 intergenic not near genes chr3R 31087646 intergenic not near genes chr3R_6_31085001 chr3R_31085001 RAL-894 2191 chr3R 31090462 31090503 chr3R 31090608 31090649 11 143 5.5 3.5 4.5 2.0 187 chr3R 31090462 intergenic CG11317 - chr3R 31090556 intergenic CG11317 - chr3R 31090649 intergenic CG11317 - chr3R_11_31090001 chr3R_31090001 RAL-894 2192 chr3R 31137136 31137163 chr3R 31137236 31137243 7 94 7.0 1.5 4.2 1.3 107 chr3R 31137136 intron Gycbeta100B + chr3R 31137190 intron Gycbeta100B + chr3R 31137243 intron Gycbeta100B + chr3R_7_31135001 chr3R_31135001 RAL-894 2193 chr3R 31137170 31137180 chr3R 31137234 31137280 5 92 4.5 1.5 3.0 1.2 110 chr3R 31137170 intron Gycbeta100B + chr3R 31137225 intron Gycbeta100B + chr3R 31137280 intron Gycbeta100B + chr3R_5_31135001 chr3R_31135001 RAL-894 2194 chr3R 31279370 31279403 chr3R 31285568 31285614 diver 7 6200 2.5 2.0 2.2 2.2 6244 chr3R 31279370 intergenic not near genes chr3R 31282492 intergenic not near genes chr3R 31285614 intergenic not near genes chr3R_7_31280001 chr3R_31280001 RAL-894 2195 chr3R 31413085 31413110 chr3R 31418289 31418318 copia 6 5207 1.0 2.5 1.8 2.1 5233 chr3R 31413085 intron Gprk2 + chr3R 31415702 intron Gprk2 + chr3R 31418318 intron Gprk2 + chr3R_6_31415001 chr3R_31415001 RAL-894 2196 chr3R 31435343 31435381 chr3R 31435515 31435553 8 170 6.5 8.5 7.5 0.9 210 chr3R 31435343 intron Gprk2 + chr3R 31435448 intron Gprk2 + chr3R 31435553 intron Gprk2 + chr3R_8_31435001 chr3R_31435001 RAL-894 2197 chr3R 31604375 31604404 chr3R 31604764 31604783 6 394 2.5 1.0 1.8 2.1 408 chr3R 31604375 intron CycG - chr3R 31604579 intron CycG - chr3R 31604783 intron CycG - chr3R_6_31600001 chr3R_31600001 RAL-894 2198 chr3R 31691520 31691563 chr3R 31696306 31696348 Doc 9 4781 2.0 4.5 3.2 2.1 4828 chr3R 31691520 intergenic not near genes chr3R 31693934 intergenic not near genes chr3R 31696348 intergenic not near genes chr3R_9_31690001 chr3R_31690001 RAL-894 2199 chr3R 31705712 31705758 chr3R 31706189 31706234 11 472 2.0 1.5 1.8 3.9 522 chr3R 31705712 intergenic CR45052 - chr3R 31705973 intergenic CR45052 - chr3R 31706234 intergenic not near genes chr3R_11_31705001 chr3R_31705001 RAL-894 2200 chr3R 31922042 31922083 chr3R 31922133 31922161 9 86 3.0 1.5 2.2 2.8 119 chr3R 31922042 intron heph - chr3R 31922102 intron heph - chr3R 31922161 intron heph - chr3R_9_31920001 chr3R_31920001 RAL-894 2201 chr3R 31961324 31961365 chr3R 31961427 31961445 10 98 4.0 3.5 3.8 2.1 121 chr3R 31961324 intron heph - chr3R 31961384 intron heph - chr3R 31961445 intron heph - chr3R_10_31960001 chr3R_31960001 RAL-894 2202 chr3R 31962058 31962090 chr3R 31962384 31962416 6 324 3.5 0.0 1.8 2.1 358 chr3R 31962058 intron heph - chr3R 31962237 intron heph - chr3R 31962416 intron heph - chr3R_6_31960001 chr3R_31960001 RAL-894 2203 chr3R 31976539 31976573 chr3R 31976840 31976854 11 299 0.0 4.0 2.0 3.7 315 chr3R 31976539 intron heph - chr3R 31976696 intron heph - chr3R 31976854 intron heph - chr3R_11_31975001 chr3R_31975001 RAL-894 2204 chr3R 31997977 31998020 chr3R 32005464 32005494 blood 8 7482 5.0 6.0 5.5 1.2 7517 chr3R 31997977 intron heph - chr3R 32001736 intron heph - chr3R 32005494 intron heph - chr3R_8_32000001 chr3R_32000001 RAL-894 2205 chr4 76478 76517 chr4 81941 81980 I-element 8 5460 9.5 5.0 7.2 1.0 5502 chr4 76478 intron pan + chr4 79229 intron pan + chr4 81980 intron pan + chr4_8_75001 chr4_75001 RAL-894 2206 chr4 280785 280798 chr4 281435 281436 4 647 9.5 2.0 5.8 0.6 651 chr4 280785 intron Syt7 - chr4 281110 intron Syt7 - chr4 281436 intron Syt7 - chr4_4_280001 chr4_280001 RAL-894 2207 chr4 311033 311040 chr4 311138 311145 4 105 10.0 7.5 8.8 0.4 112 chr4 311033 3` UTR Zip102B - chr4 311089 3` UTR Zip102B - chr4 311145 3` UTR Zip102B - chr4_4_310001 chr4_310001 RAL-894 2208 chr4 311042 311084 chr4 311137 311154 14 97 2.5 7.0 4.8 2.4 112 chr4 311042 3` UTR Zip102B - chr4 311098 3` UTR Zip102B - chr4 311154 3` UTR Zip102B - chr4_14_310001 chr4_310001 RAL-894 2209 chr4 314514 314527 chr4 314606 314625 4 96 3.0 6.0 4.5 0.7 111 chr4 314514 intergenic CG32850 +,Zip102B - chr4 314570 intergenic CG32850 +,Zip102B - chr4 314625 intergenic CG32850 + chr4_4_310001 chr4_310001 RAL-894 2210 chr4 319981 320019 chr4 328166 328215 Stalker2 14 8193 8.5 5.5 7.0 1.8 8234 chr4 319981 3` UTR CG32850 + chr4 324098 intron CG32850 + chr4 328215 3` UTR,3` UTR CG32850 +,PMCA - chr4_14_320001 chr4_320001 RAL-894 2211 chr4 409228 409248 chr4 409301 409351 11 98 4.0 0.5 2.2 3.4 123 chr4 409228 intergenic not near genes chr4 409290 intergenic not near genes chr4 409351 intergenic not near genes chr4_11_405001 chr4_405001 RAL-894 2212 chr4 671588 671615 chr4 680189 680218 Tirant 7 8602 6.5 7.5 7.0 0.9 8630 chr4 671588 intron CG11360 + chr4 675903 intron CG11360 + chr4 680218 intron CG11360 + chr4_7_675001 chr4_675001 RAL-894 2213 chr4 671617 671636 chr4 680187 680200 Tirant 12 8594 4.0 7.0 5.5 1.8 8583 chr4 671617 intron CG11360 + chr4 675908 intron CG11360 + chr4 680200 intron CG11360 + chr4_12_675001 chr4_675001 RAL-894 2214 chr4 847106 847119 chr4 847288 847330 4 205 3.5 3.0 3.2 1.0 224 chr4 847106 intergenic not near genes chr4 847218 intergenic not near genes chr4 847330 intergenic not near genes chr4_4_845001 chr4_845001 RAL-894 2215 chr4 959608 959622 chr4 959806 959809 5 196 8.5 3.5 6.0 0.7 201 chr4 959608 intergenic CR44030 +,CR45201 - chr4 959708 5` UTR CR44030 + chr4 959809 5` UTR CR44030 + chr4_5_955001 chr4_955001 RAL-894 2216 chr4 959628 959648 chr4 959801 959833 8 191 6.0 3.5 4.8 1.4 205 chr4 959628 intergenic CR44030 +,CR45201 - chr4 959730 5` UTR CR44030 + chr4 959833 5` UTR CR44030 + chr4_8_955001 chr4_955001 RAL-894 2217 chr4 972485 972524 chr4 972587 972626 9 96 3.0 6.0 4.5 1.6 141 chr4 972485 intron fuss - chr4 972556 intron fuss - chr4 972626 intron fuss - chr4_9_970001 chr4_970001 RAL-894 2218 chr4 1171929 1171975 chr4 1172214 1172255 8 280 5.5 4.5 5.0 1.3 326 chr4 1171929 intergenic not near genes chr4 1172092 intergenic pho - chr4 1172255 intergenic pho - chr4_8_1170001 chr4_1170001 RAL-894 2219 chrX 318476 318498 chrX 323557 323590 flea 16 5100 3.5 3.0 3.2 3.8 5114 chrX 318476 intron,intron CG3777 +,CG32816 - chrX 321033 intron,intron CG3777 +,CG32816 - chrX 323590 intron,intron CG3777 +,CG32816 - chrX_16_320001 chrX_320001 RAL-894 2220 chrX 383837 383856 chrX 384364 384387 4 528 2.0 4.5 3.2 1.0 550 chrX 383837 intron CG32816 - chrX 384112 intron CG32816 - chrX 384387 intron CG32816 - chrX_4_380001 chrX_380001 RAL-894 2221 chrX 428408 428451 chrX 434610 434656 3S18 14 6203 6.0 5.0 5.5 2.2 6248 chrX 428408 intron CG32816 - chrX 431532 intron CG32816 - chrX 434656 intron CG32816 - chrX_14_430001 chrX_430001 RAL-894 2222 chrX 508783 508822 chrX 509270 509283 4 475 23.0 12.5 17.8 0.2 500 chrX 508783 3` UTR svr + chrX 509033 3` UTR svr + chrX 509283 3` UTR elav - chrX_4_505001 chrX_505001 RAL-894 2223 chrX 601053 601081 chrX 601174 601202 7 119 4.5 1.5 3.0 1.8 149 chrX 601053 intron CG13366 - chrX 601128 intron CG13366 - chrX 601202 intron CG13366 - chrX_7_600001 chrX_600001 RAL-894 2224 chrX 778121 778151 chrX 778228 778261 5 104 0.0 0.0 0.0 5.0 140 chrX 778121 intron fz3 + chrX 778191 intron fz3 + chrX 778261 intron fz3 + chrX_5_775001 chrX_775001 RAL-894 2225 chrX 827602 827634 chrX 835397 835441 roo 8 7803 1.0 7.0 4.0 1.6 7839 chrX 827602 intron CG43867 - chrX 831522 intron CG43867 - chrX 835441 intron CG43867 - chrX_8_830001 chrX_830001 RAL-894 2226 chrX 906682 906716 chrX 908491 908519 S-element 6 1806 2.0 14.0 8.0 0.7 1837 chrX 906682 intron CG43867 - chrX 907600 intron CG43867 - chrX 908519 intron CG43867 - chrX_6_905001 chrX_905001 RAL-894 2227 chrX 912010 912048 chrX 912112 912136 4 101 2.0 1.0 1.5 1.6 126 chrX 912010 intron CG43867 - chrX 912073 intron CG43867 - chrX 912136 intron CG43867 - chrX_4_910001 chrX_910001 RAL-894 2228 chrX 1091941 1091981 chrX 1092133 1092165 11 190 2.0 1.5 1.8 3.9 224 chrX 1091941 intron CG3655 - chrX 1092053 intron CG3655 - chrX 1092165 intron CG3655 - chrX_11_1090001 chrX_1090001 RAL-894 2229 chrX 1357759 1357803 chrX 1367949 1367950 Doc 8 10180 6.5 3.5 5.0 1.3 10191 chrX 1357759 intergenic png - chrX 1362854 intergenic not near genes chrX 1367950 intergenic not near genes chrX_8_1360001 chrX_1360001 RAL-894 2230 chrX 1518042 1518071 chrX 1523442 1523487 jockey 8 5411 3.0 5.5 4.2 1.5 5445 chrX 1518042 intergenic inc + chrX 1520764 intergenic not near genes chrX 1523487 intergenic not near genes chrX_8_1520001 chrX_1520001 RAL-894 2231 chrX 1930553 1930564 chrX 1938140 1938155 opus 4 7590 3.0 8.0 5.5 0.6 7602 chrX 1930553 intergenic CG11596 + chrX 1934354 intergenic not near genes chrX 1938155 3` UTR CG3857 - chrX_4_1930001 chrX_1930001 RAL-894 2232 chrX 2045003 2045038 chrX 2045090 2045135 13 89 4.0 1.0 2.5 3.7 132 chrX 2045003 intron,3` UTR CG4313 +,moody - chrX 2045069 intron,3` UTR CG4313 +,moody - chrX 2045135 intron,exon CG4313 +,moody - chrX_13_2045001 chrX_2045001 RAL-894 2233 chrX 2399832 2399868 chrX 2408204 2408215 roo 5 8355 1.0 2.5 1.8 1.8 8383 chrX 2399832 intergenic not near genes chrX 2404024 intergenic not near genes chrX 2408215 intergenic not near genes chrX_5_2400001 chrX_2400001 RAL-894 2234 chrX 2578802 2578822 chrX 2578902 2578927 7 105 4.5 2.0 3.2 1.7 125 chrX 2578802 intergenic Pdfr +,Vha36-3 - chrX 2578864 intergenic Pdfr +,Vha36-3 - chrX 2578927 intergenic Vha36-3 -,Pdfr + chrX_7_2575001 chrX_2575001 RAL-894 2235 chrX 2664366 2664416 chrX 2665532 2665568 1360 12 1157 5.5 3.0 4.2 2.3 1202 chrX 2664366 intron sgg + chrX 2664967 intron sgg + chrX 2665568 intron sgg + chrX_12_2660001 chrX_2660001 RAL-894 2236 chrX 2844897 2844928 chrX 2852324 2852358 mdg1 5 7429 1.0 3.5 2.2 1.6 7461 chrX 2844897 intron kirre + chrX 2848628 intron kirre + chrX 2852358 intron kirre + chrX_5_2845001 chrX_2845001 RAL-894 2237 chrX 3203477 3203493 chrX 3203675 3203712 4 206 3.0 5.0 4.0 0.8 235 chrX 3203477 intron dnc + chrX 3203594 intron dnc + chrX 3203712 intron dnc + chrX_4_3200001 chrX_3200001 RAL-894 2238 chrX 3218493 3218531 chrX 3227662 3227700 roo 8 9169 2.0 4.5 3.2 1.9 9207 chrX 3218493 intron dnc + chrX 3223096 intron dnc + chrX 3227700 intron dnc + chrX_8_3220001 chrX_3220001 RAL-894 2239 chrX 3243613 3243651 chrX 3243723 3243761 11 106 6.0 3.0 4.5 2.0 148 chrX 3243613 intron dnc + chrX 3243687 intron dnc + chrX 3243761 intron dnc + chrX_11_3240001 chrX_3240001 RAL-894 2240 chrX 3306167 3306351 chrX 3306255 3306425 12 95 3.5 4.5 4.0 2.4 258 chrX 3306167 intron dnc + chrX 3306296 intron dnc + chrX 3306425 intron dnc + chrX_12_3305001 chrX_3305001 RAL-894 2241 chrX 3322644 3322652 chrX 3322737 3322737 4 90 1.5 5.0 3.2 1.0 93 chrX 3322644 intron,intron dnc +,CR44886 - chrX 3322690 intron,intron dnc +,CR44886 - chrX 3322737 intron,intron dnc +,CR44886 - chrX_4_3320001 chrX_3320001 RAL-894 2242 chrX 3398139 3398158 chrX 3398224 3398259 8 95 2.0 4.5 3.2 1.9 120 chrX 3398139 intron,intron CR44999 +,CG12535 - chrX 3398199 intron,intron CR44999 +,CG12535 - chrX 3398259 intron,intron CR44999 +,CG12535 - chrX_8_3395001 chrX_3395001 RAL-894 2243 chrX 3513746 3513790 chrX 3513846 3513847 9 94 2.5 2.5 2.5 2.6 101 chrX 3513746 intron,intron CR44999 +,CG32791 - chrX 3513796 intron,intron CR44999 +,CG32791 - chrX 3513847 intron,intron CR44999 +,CG32791 - chrX_9_3510001 chrX_3510001 RAL-894 2244 chrX 3595037 3595045 chrX 3595101 3595115 5 81 2.0 4.5 3.2 1.2 78 chrX 3595037 intron AstA-R1 + chrX 3595076 intron AstA-R1 + chrX 3595115 intron AstA-R1 + chrX_5_3595001 chrX_3595001 RAL-894 2245 chrX 3597555 3597568 chrX 3619720 3619756 roo 7 22182 3.0 2.0 2.5 2.0 22201 chrX 3597555 intron AstA-R1 + chrX 3608656 intron AstA-R1 + chrX 3619756 intron AstA-R1 + chrX_7_3605001 chrX_3605001 RAL-894 2246 chrX 3657411 3657444 chrX 3657492 3657544 11 95 2.5 3.0 2.8 2.9 133 chrX 3657411 intron AstA-R1 + chrX 3657478 intron AstA-R1 + chrX 3657544 intron AstA-R1 + chrX_11_3655001 chrX_3655001 RAL-894 2247 chrX 3881252 3881305 chrX 3881410 3881464 13 158 2.0 0.5 1.2 5.9 212 chrX 3881252 intron VhaAC39-1 + chrX 3881358 intron VhaAC39-1 + chrX 3881464 exon VhaAC39-1 + chrX_13_3880001 chrX_3880001 RAL-894 2248 chrX 3986869 3986894 chrX 3994522 3994537 412 4 7650 1.0 5.0 3.0 1.0 7668 chrX 3986869 intergenic not near genes chrX 3990703 intergenic not near genes chrX 3994537 intergenic not near genes chrX_4_3990001 chrX_3990001 RAL-894 2249 chrX 4029516 4029554 chrX 4029722 4029728 6 197 2.0 3.5 2.8 1.6 212 chrX 4029516 intergenic not near genes chrX 4029622 intergenic not near genes chrX 4029728 intergenic not near genes chrX_6_4025001 chrX_4025001 RAL-894 2250 chrX 4101846 4101899 chrX 4101944 4101970 11 87 0.0 2.0 1.0 5.5 124 chrX 4101846 exon CG15375 + chrX 4101908 exon CG15375 + chrX 4101970 exon CG15375 + chrX_11_4100001 chrX_4100001 RAL-894 2251 chrX 4157895 4157915 chrX 4164955 4164988 297 6 7068 2.0 3.0 2.5 1.7 7093 chrX 4157895 intron Fas2 - chrX 4161442 intron Fas2 - chrX 4164988 intron Fas2 - chrX_6_4160001 chrX_4160001 RAL-894 2252 chrX 4175708 4175746 chrX 4175826 4175872 6 110 1.0 3.0 2.0 2.0 164 chrX 4175708 intron Fas2 - chrX 4175790 intron Fas2 - chrX 4175872 intron Fas2 - chrX_6_4175001 chrX_4175001 RAL-894 2253 chrX 4203506 4203539 chrX 4203602 4203639 4 99 2.5 2.0 2.2 1.2 133 chrX 4203506 intron Fas2 - chrX 4203572 intron Fas2 - chrX 4203639 intron Fas2 - chrX_4_4200001 chrX_4200001 RAL-894 2254 chrX 4240165 4240198 chrX 4240302 4240330 5 136 3.5 3.0 3.2 1.2 165 chrX 4240165 intergenic not near genes chrX 4240248 intergenic not near genes chrX 4240330 intergenic not near genes chrX_5_4240001 chrX_4240001 RAL-894 2255 chrX 4252934 4252980 chrX 4253037 4253059 4 93 2.5 2.0 2.2 1.2 125 chrX 4252934 intergenic CG15576 - chrX 4252996 intergenic CG15576 - chrX 4253059 intergenic CG15576 - chrX_4_4250001 chrX_4250001 RAL-894 2256 chrX 4337907 4337934 chrX 4338050 4338077 6 143 4.0 3.5 3.8 1.2 170 chrX 4337907 intron norpA + chrX 4337992 intron norpA + chrX 4338077 intron norpA + chrX_6_4335001 chrX_4335001 RAL-894 2257 chrX 4337941 4337952 chrX 4338049 4338068 8 130 1.5 3.5 2.5 2.3 127 chrX 4337941 intron norpA + chrX 4338004 intron norpA + chrX 4338068 intron norpA + chrX_8_4335001 chrX_4335001 RAL-894 2258 chrX 4396961 4397004 chrX 4397059 4397072 4 86 2.0 1.5 1.8 1.4 111 chrX 4396961 intron CR32773 - chrX 4397016 intron CR32773 - chrX 4397072 intron CR32773 - chrX_4_4395001 chrX_4395001 RAL-894 2259 chrX 4660807 4660828 chrX 4660926 4660938 5 117 8.5 0.0 4.2 1.0 131 chrX 4660807 intron CG3009 - chrX 4660872 intron CG3009 - chrX 4660938 intron CG3009 - chrX_5_4660001 chrX_4660001 RAL-894 2260 chrX 4731797 4731811 chrX 4736909 4736924 jockey 5 5111 3.5 5.5 4.5 0.9 5127 chrX 4731797 intergenic not near genes chrX 4734360 intergenic not near genes chrX 4736924 intergenic not near genes chrX_5_4730001 chrX_4730001 RAL-894 2261 chrX 4757374 4757404 chrX 4757462 4757502 4 90 0.0 2.0 1.0 2.0 128 chrX 4757374 intergenic not near genes chrX 4757438 intergenic not near genes chrX 4757502 intergenic not near genes chrX_4_4755001 chrX_4755001 RAL-894 2262 chrX 4792375 4792398 chrX 4792811 4792851 jockey 7 445 1.5 4.5 3.0 1.8 476 chrX 4792375 intergenic not near genes chrX 4792613 intergenic not near genes chrX 4792851 intergenic not near genes chrX_7_4790001 chrX_4790001 RAL-894 2263 chrX 4827656 4827677 chrX 4827731 4827773 7 87 4.0 2.0 3.0 1.8 117 chrX 4827656 intergenic not near genes chrX 4827714 intergenic not near genes chrX 4827773 intergenic not near genes chrX_7_4825001 chrX_4825001 RAL-894 2264 chrX 4827978 4827989 chrX 4835344 4835370 Stalker4 4 7375 3.5 1.5 2.5 1.1 7392 chrX 4827978 intergenic not near genes chrX 4831674 intergenic not near genes chrX 4835370 intergenic not near genes chrX_4_4830001 chrX_4830001 RAL-894 2265 chrX 4878891 4878906 chrX 4878988 4879035 4 121 3.0 1.0 2.0 1.3 144 chrX 4878891 intron CG42594 + chrX 4878963 intron CG42594 + chrX 4879035 intron CG42594 + chrX_4_4875001 chrX_4875001 RAL-894 2266 chrX 4893359 4893384 chrX 4893648 4893673 4 289 2.5 2.0 2.2 1.2 314 chrX 4893359 intron CG42594 + chrX 4893516 intron CG42594 + chrX 4893673 intron CG42594 + chrX_4_4890001 chrX_4890001 RAL-894 2267 chrX 4990028 4990063 chrX 4997262 4997297 roo 8 7232 6.0 3.5 4.8 1.4 7269 chrX 4990028 intron CR44833 - chrX 4993662 intron CR44833 - chrX 4997297 intron CR44833 - chrX_8_4990001 chrX_4990001 RAL-894 2268 chrX 5055837 5055875 chrX 5055989 5055995 4 137 4.5 4.0 4.2 0.8 158 chrX 5055837 intron,intron CR44833 -,ovo + chrX 5055916 intron,intron CR44833 -,ovo + chrX 5055995 intron,intron CR44833 -,ovo + chrX_4_5055001 chrX_5055001 RAL-894 2269 chrX 5456568 5456600 chrX 5456704 5456705 9 131 5.0 3.0 4.0 1.8 137 chrX 5456568 intron SPR + chrX 5456636 intron SPR + chrX 5456705 intron SPR + chrX_9_5455001 chrX_5455001 RAL-894 2270 chrX 5473565 5473609 chrX 5473661 5473685 9 89 0.0 0.5 0.2 7.5 120 chrX 5473565 intron SPR + chrX 5473625 intron SPR + chrX 5473685 intron SPR + chrX_9_5470001 chrX_5470001 RAL-894 2271 chrX 5501359 5501364 chrX 5501458 5501463 4 99 1.5 2.0 1.8 1.4 104 chrX 5501359 intergenic CG4151 +,CG32762 - chrX 5501411 intergenic CG4151 +,CG32762 - chrX 5501463 intergenic CG4151 +,CG32762 - chrX_4_5500001 chrX_5500001 RAL-894 2272 chrX 5524832 5524855 chrX 5528703 5528738 412 4 3880 4.5 2.0 3.2 1.0 3906 chrX 5524832 intergenic snoRNA:Psi28S-3342 - chrX 5526785 intergenic not near genes chrX 5528738 intergenic Vsx2 - chrX_4_5525001 chrX_5525001 RAL-894 2273 chrX 5634570 5634597 chrX 5634657 5634674 5 84 4.0 1.5 2.8 1.3 104 chrX 5634570 intron CG42492 - chrX 5634622 intron CG42492 - chrX 5634674 intron CG42492 - chrX_5_5630001 chrX_5630001 RAL-894 2274 chrX 5883831 5883839 chrX 5884059 5884076 pogo 5 246 1.5 5.5 3.5 1.1 245 chrX 5883831 intron CR45668 - chrX 5883954 intron CR45668 - chrX 5884076 intron CR45668 - chrX_5_5880001 chrX_5880001 RAL-894 2275 chrX 5884153 5884191 chrX 5884403 5884431 pogo 9 257 3.5 3.0 3.2 2.1 278 chrX 5884153 intron CR45668 - chrX 5884292 intron CR45668 - chrX 5884431 intron CR45668 - chrX_9_5880001 chrX_5880001 RAL-894 2276 chrX 5886281 5886317 chrX 5886879 5886908 5 592 4.5 1.5 3.0 1.2 627 chrX 5886281 intron CR45668 - chrX 5886594 intron CR45668 - chrX 5886908 intron CR45668 - chrX_5_5885001 chrX_5885001 RAL-894 2277 chrX 6003274 6003302 chrX 6003375 6003403 5 101 1.0 2.5 1.8 1.8 129 chrX 6003274 intron CR44498 + chrX 6003338 intron CR44498 + chrX 6003403 intron CR44498 + chrX_5_6000001 chrX_6000001 RAL-894 2278 chrX 6009231 6009270 chrX 6009591 6009629 10 359 3.5 3.5 3.5 2.2 398 chrX 6009231 intron mab-21 - chrX 6009430 intron mab-21 - chrX 6009629 intron mab-21 - chrX_10_6005001 chrX_6005001 RAL-894 2279 chrX 6171567 6171613 chrX 6179020 6179059 Quasimodo 8 7442 2.0 2.5 2.2 2.5 7492 chrX 6171567 intron Ca-alpha1T - chrX 6175313 intron Ca-alpha1T - chrX 6179059 intron Ca-alpha1T - chrX_8_6175001 chrX_6175001 RAL-894 2280 chrX 6219418 6219438 chrX 6219520 6219540 8 101 8.0 3.5 5.8 1.2 122 chrX 6219418 intergenic Btd - chrX 6219479 intergenic Btd -,Efr + chrX 6219540 intergenic Btd -,Efr + chrX_8_6215001 chrX_6215001 RAL-894 2281 chrX 6219443 6219465 chrX 6219518 6219567 5 93 5.0 3.5 4.2 1.0 124 chrX 6219443 intergenic Btd - chrX 6219505 intergenic Btd -,Efr + chrX 6219567 intergenic Btd -,Efr + chrX_5_6215001 chrX_6215001 RAL-894 2282 chrX 6315164 6315188 chrX 6315294 6315328 5 144 5.0 6.0 5.5 0.8 164 chrX 6315164 intron CG15894 + chrX 6315246 intron CG15894 + chrX 6315328 intron CG15894 + chrX_5_6315001 chrX_6315001 RAL-894 2283 chrX 6335224 6335236 chrX 6337752 6337766 Tirant 7 2527 0.0 5.0 2.5 2.0 2542 chrX 6335224 intergenic not near genes chrX 6336495 intergenic not near genes chrX 6337766 5` UTR CG3842 + chrX_7_6335001 chrX_6335001 RAL-894 2284 chrX 6392879 6392904 chrX 6397637 6397654 Doc 6 4774 0.5 4.5 2.5 1.7 4775 chrX 6392879 intergenic not near genes chrX 6395266 intergenic not near genes chrX 6397654 intergenic not near genes chrX_6_6395001 chrX_6395001 RAL-894 2285 chrX 6445321 6445334 chrX 6451096 6451112 297 4 5777 2.5 4.5 3.5 0.9 5791 chrX 6445321 intron CG42340 - chrX 6448216 intron CG42340 - chrX 6451112 intron CG42340 - chrX_4_6445001 chrX_6445001 RAL-894 2286 chrX 6539894 6539944 chrX 6540016 6540038 12 119 0.5 3.5 2.0 4.0 144 chrX 6539894 intergenic not near genes chrX 6539966 intergenic not near genes chrX 6540038 intergenic not near genes chrX_12_6535001 chrX_6535001 RAL-894 2287 chrX 6562821 6562840 chrX 6571298 6571319 Tirant 5 8474 4.0 1.5 2.8 1.3 8498 chrX 6562821 intron CG34417 + chrX 6567070 intron CG34417 + chrX 6571319 intron CG34417 + chrX_5_6565001 chrX_6565001 RAL-894 2288 chrX 6591835 6591871 chrX 6591940 6591976 8 104 2.0 0.0 1.0 4.0 141 chrX 6591835 intron Pat1 + chrX 6591906 intron Pat1 + chrX 6591976 intron Pat1 + chrX_8_6590001 chrX_6590001 RAL-894 2289 chrX 6889211 6889254 chrX 6889307 6889332 11 90 3.0 2.0 2.5 3.1 121 chrX 6889211 intergenic not near genes chrX 6889272 intergenic not near genes chrX 6889332 intergenic not near genes chrX_11_6885001 chrX_6885001 RAL-894 2290 chrX 6897276 6897286 chrX 6897595 6897605 4 319 1.5 9.5 5.5 0.6 329 chrX 6897276 intergenic not near genes chrX 6897440 intergenic not near genes chrX 6897605 intergenic not near genes chrX_4_6895001 chrX_6895001 RAL-894 2291 chrX 6897664 6897709 chrX 6897794 6897831 6 129 3.0 1.5 2.2 1.9 167 chrX 6897664 intergenic not near genes chrX 6897748 intergenic not near genes chrX 6897831 intergenic not near genes chrX_6_6895001 chrX_6895001 RAL-894 2292 chrX 7023582 7023629 chrX 7030992 7031012 Tabor 8 7399 5.0 1.5 3.2 1.9 7430 chrX 7023582 intron CG12541 - chrX 7027297 intron CG12541 - chrX 7031012 intron CG12541 - chrX_8_7025001 chrX_7025001 RAL-894 2293 chrX 7047471 7047516 chrX 7047582 7047627 7 102 0.0 2.5 1.2 3.2 156 chrX 7047471 intron CG12541 - chrX 7047549 intron CG12541 - chrX 7047627 intron CG12541 - chrX_7_7045001 chrX_7045001 RAL-894 2294 chrX 7125231 7125271 chrX 7134410 7134450 roo 4 9175 0.0 7.5 3.8 0.8 9219 chrX 7125231 intergenic not near genes chrX 7129840 intergenic not near genes chrX 7134450 intergenic not near genes chrX_4_7125001 chrX_7125001 RAL-894 2295 chrX 7570623 7570659 chrX 7570777 7570811 9 153 3.0 2.0 2.5 2.6 188 chrX 7570623 intergenic not near genes chrX 7570717 intergenic not near genes chrX 7570811 intergenic not near genes chrX_9_7570001 chrX_7570001 RAL-894 2296 chrX 7702893 7702900 chrX 7703352 7703359 jockey 4 459 11.0 10.5 10.8 0.3 466 chrX 7702893 intron CHES-1-like - chrX 7703126 intron CHES-1-like - chrX 7703359 intron CHES-1-like - chrX_4_7700001 chrX_7700001 RAL-894 2297 chrX 7702907 7702933 chrX 7703347 7703357 jockey 10 449 5.5 8.5 7.0 1.2 450 chrX 7702907 intron CHES-1-like - chrX 7703132 intron CHES-1-like - chrX 7703357 intron CHES-1-like - chrX_10_7700001 chrX_7700001 RAL-894 2298 chrX 7836595 7836688 chrX 7836688 7836761 4 83 0.0 0.0 0.0 4.0 166 chrX 7836595 intron CG1402 + chrX 7836678 intron CG1402 + chrX 7836761 intron CG1402 + chrX_4_7835001 chrX_7835001 RAL-894 2299 chrX 7845708 7845756 chrX 7847215 7847262 hopper2 5 1506 4.0 3.5 3.8 1.0 1554 chrX 7845708 intergenic not near genes chrX 7846485 intergenic not near genes chrX 7847262 intergenic not near genes chrX_5_7845001 chrX_7845001 RAL-894 2300 chrX 7881836 7881880 chrX 7881940 7881982 9 102 1.5 2.0 1.8 3.2 146 chrX 7881836 intergenic Ir7f -,Ir7e - chrX 7881909 intergenic Ir7f -,Ir7e - chrX 7881982 3` UTR Ir7f - chrX_9_7880001 chrX_7880001 RAL-894 2301 chrX 8079905 8079936 chrX 8080024 8080066 9 128 0.5 3.0 1.8 3.2 161 chrX 8079905 exon CG2254 - chrX 8079986 intron CG2254 - chrX 8080066 intron CG2254 - chrX_9_8075001 chrX_8075001 RAL-894 2302 chrX 8085555 8085601 chrX 8085661 8085707 18 105 4.0 4.5 4.2 3.5 152 chrX 8085555 intron,5` UTR CG2256 -,CR45535 + chrX 8085631 intron,5` UTR CG2256 -,CR45535 + chrX 8085707 intron,5` UTR CG2256 -,CR45535 + chrX_18_8085001 chrX_8085001 RAL-894 2303 chrX 8331939 8331962 chrX 8332079 8332102 5 139 2.5 1.5 2.0 1.7 163 chrX 8331939 intron nAChRalpha3 - chrX 8332020 intron nAChRalpha3 - chrX 8332102 intron nAChRalpha3 - chrX_5_8330001 chrX_8330001 RAL-894 2304 chrX 8500912 8500950 chrX 8501096 8501115 9 181 2.0 0.0 1.0 4.5 203 chrX 8500912 intron CG33181 + chrX 8501014 intron CG33181 + chrX 8501115 intron CG33181 + chrX_9_8500001 chrX_8500001 RAL-894 2305 chrX 8544129 8544161 chrX 8544228 8544260 9 99 2.0 4.5 3.2 2.1 131 chrX 8544129 intron Nrg + chrX 8544194 intron Nrg + chrX 8544260 intron Nrg + chrX_9_8540001 chrX_8540001 RAL-894 2306 chrX 8727389 8727427 chrX 8727476 8727524 9 95 1.0 3.5 2.2 2.8 135 chrX 8727389 intergenic not near genes chrX 8727456 intergenic not near genes chrX 8727524 intergenic not near genes chrX_9_8725001 chrX_8725001 RAL-894 2307 chrX 8860776 8860798 chrX 8860879 8860902 4 102 0.0 8.0 4.0 0.8 126 chrX 8860776 intron CG12075 + chrX 8860839 intron CG12075 + chrX 8860902 intron CG12075 + chrX_4_8860001 chrX_8860001 RAL-894 2308 chrX 8894986 8894997 chrX 8895092 8895103 8 105 7.0 2.5 4.8 1.4 117 chrX 8894986 intron Moe - chrX 8895044 intron Moe - chrX 8895103 intron Moe - chrX_8_8895001 chrX_8895001 RAL-894 2309 chrX 8922324 8922363 chrX 8922761 8922797 jockey 8 438 0.5 2.5 1.5 3.2 473 chrX 8922324 intron rdgA + chrX 8922560 intron rdgA + chrX 8922797 intron rdgA + chrX_8_8920001 chrX_8920001 RAL-894 2310 chrX 8948741 8948790 chrX 8956269 8956305 roo 8 7525 4.0 2.5 3.2 1.9 7564 chrX 8948741 intron rdgA + chrX 8952523 intron rdgA + chrX 8956305 intron rdgA + chrX_8_8950001 chrX_8950001 RAL-894 2311 chrX 9062724 9062753 chrX 9062822 9062851 6 92 1.5 0.5 1.0 3.0 127 chrX 9062724 intron CG15365 - chrX 9062788 intron CG15365 - chrX 9062851 intron CG15365 - chrX_6_9060001 chrX_9060001 RAL-894 2312 chrX 9152066 9152106 chrX 9152169 9152208 6 102 3.0 1.0 2.0 2.0 142 chrX 9152066 intergenic dalao +,His3.3B - chrX 9152137 intergenic dalao +,His3.3B - chrX 9152208 intergenic dalao +,His3.3B - chrX_6_9150001 chrX_9150001 RAL-894 2313 chrX 9188002 9188023 chrX 9188099 9188120 5 97 3.0 7.0 5.0 0.8 118 chrX 9188002 3` UTR mei-P26 + chrX 9188061 3` UTR mei-P26 + chrX 9188120 3` UTR mei-P26 + chrX_5_9185001 chrX_9185001 RAL-894 2314 chrX 9229886 9229936 chrX 9229986 9230036 10 94 3.0 1.5 2.2 3.1 150 chrX 9229886 intron CG12121 - chrX 9229961 intron CG12121 - chrX 9230036 intron CG12121 - chrX_10_9225001 chrX_9225001 RAL-894 2315 chrX 9377811 9377829 chrX 9377908 9377921 5 95 6.5 1.5 4.0 1.0 110 chrX 9377811 intron mgl - chrX 9377866 intron mgl - chrX 9377921 intron mgl - chrX_5_9375001 chrX_9375001 RAL-894 2316 chrX 9457821 9457853 chrX 9457918 9457941 8 93 3.0 5.0 4.0 1.6 120 chrX 9457821 intron mgl - chrX 9457881 intron mgl - chrX 9457941 intron mgl - chrX_8_9455001 chrX_9455001 RAL-894 2317 chrX 9465117 9465136 chrX 9465231 9465250 4 109 9.5 3.0 6.2 0.6 133 chrX 9465117 intron mgl - chrX 9465184 intron mgl - chrX 9465250 intron mgl - chrX_4_9465001 chrX_9465001 RAL-894 2318 chrX 9465138 9465165 chrX 9465228 9465272 8 106 3.5 3.0 3.2 1.9 134 chrX 9465138 intron mgl - chrX 9465205 intron mgl - chrX 9465272 intron mgl - chrX_8_9465001 chrX_9465001 RAL-894 2319 chrX 9508146 9508158 chrX 9509656 9509687 jockey 4 1520 4.0 0.5 2.2 1.2 1541 chrX 9508146 intron CG32700 - chrX 9508916 intron CG32700 - chrX 9509687 intron CG32700 - chrX_4_9505001 chrX_9505001 RAL-894 2320 chrX 9575787 9575821 chrX 9576117 9576165 mdg3 7 338 2.0 6.0 4.0 1.4 378 chrX 9575787 intron,exon CG32699 -,CG42395 - chrX 9575976 intron,intron CG32699 -,CG42395 - chrX 9576165 intron,5` UTR CG32699 -,CG42395 - chrX_7_9575001 chrX_9575001 RAL-894 2321 chrX 9599197 9599199 chrX 9599253 9599282 4 73 2.5 2.5 2.5 1.1 85 chrX 9599197 intergenic not near genes chrX 9599240 intergenic not near genes chrX 9599282 intergenic not near genes chrX_4_9595001 chrX_9595001 RAL-894 2322 chrX 9749165 9749197 chrX 9749332 9749355 8 165 3.0 3.5 3.2 1.9 190 chrX 9749165 intron Sp1 + chrX 9749260 intron Sp1 + chrX 9749355 intron Sp1 + chrX_8_9745001 chrX_9745001 RAL-894 2323 chrX 9791848 9791890 chrX 9791965 9792003 7 115 3.0 0.5 1.8 2.5 155 chrX 9791848 intron CG32698 + chrX 9791926 intron CG32698 + chrX 9792003 intron CG32698 + chrX_7_9790001 chrX_9790001 RAL-894 2324 chrX 9839326 9839371 chrX 9839424 9839473 6 98 0.0 2.0 1.0 3.0 147 chrX 9839326 intron CG32698 + chrX 9839400 intron CG32698 + chrX 9839473 intron CG32698 + chrX_6_9835001 chrX_9835001 RAL-894 2325 chrX 10138198 10138248 chrX 10145722 10145759 412 5 7520 2.5 2.5 2.5 1.4 7561 chrX 10138198 intron,intron RhoU +,CR44894 - chrX 10141978 intron,intron RhoU +,CR44894 - chrX 10145759 intron,intron RhoU +,CR44894 - chrX_5_10140001 chrX_10140001 RAL-894 2326 chrX 10186969 10187012 chrX 10187078 10187121 4 106 0.5 2.0 1.2 1.8 152 chrX 10186969 intron,intron CR44894 -,CG43902 + chrX 10187045 intron,intron CR44894 -,CG43902 + chrX 10187121 intron,intron CR44894 -,CG43902 + chrX_4_10185001 chrX_10185001 RAL-894 2327 chrX 10267313 10267333 chrX 10276457 10276503 roo 5 9163 0.0 2.0 1.0 2.5 9190 chrX 10267313 3` UTR alpha-Man-I - chrX 10271908 intron alpha-Man-I - chrX 10276503 3` UTR alpha-Man-I - chrX_5_10270001 chrX_10270001 RAL-894 2328 chrX 10317540 10317580 chrX 10317638 10317678 10 97 0.5 2.0 1.2 4.5 138 chrX 10317540 intron alpha-Man-I - chrX 10317609 intron alpha-Man-I - chrX 10317678 intron alpha-Man-I - chrX_10_10315001 chrX_10315001 RAL-894 2329 chrX 10343453 10343487 chrX 10343660 10343699 4 207 4.5 0.5 2.5 1.1 246 chrX 10343453 intron CG43740 + chrX 10343576 intron CG43740 + chrX 10343699 intron CG43740 + chrX_4_10340001 chrX_10340001 RAL-894 2330 chrX 10348789 10348824 chrX 10356364 10356383 springer 7 7577 3.0 3.0 3.0 1.8 7594 chrX 10348789 intergenic snoRNA:U3:9B + chrX 10352586 intergenic not near genes chrX 10356383 intergenic l(1)G0289 - chrX_7_10350001 chrX_10350001 RAL-894 2331 chrX 10382644 10382671 chrX 10382746 10382773 5 102 1.5 1.0 1.2 2.3 129 chrX 10382644 exon CG17841 + chrX 10382708 3` UTR CG17841 + chrX 10382773 3` UTR CG17841 + chrX_5_10380001 chrX_10380001 RAL-894 2332 chrX 10525050 10525070 chrX 10532139 10532153 297 5 7086 7.0 4.5 5.8 0.7 7103 chrX 10525050 intron spri - chrX 10528602 intron spri - chrX 10532153 intron spri - chrX_5_10525001 chrX_10525001 RAL-894 2333 chrX 10550314 10550364 chrX 10550411 10550462 18 98 3.5 3.5 3.5 4.0 148 chrX 10550314 intron spri - chrX 10550388 intron spri - chrX 10550462 intron spri - chrX_18_10550001 chrX_10550001 RAL-894 2334 chrX 10550843 10550889 chrX 10552322 10552343 hobo 9 1473 4.0 2.0 3.0 2.2 1500 chrX 10550843 intron spri - chrX 10551593 intron spri - chrX 10552343 intron spri - chrX_9_10550001 chrX_10550001 RAL-894 2335 chrX 10686035 10686082 chrX 10691192 10691239 roo 11 5156 0.5 3.0 1.8 3.9 5204 chrX 10686035 intron X11Lbeta + chrX 10688637 intron X11Lbeta + chrX 10691239 intron X11Lbeta + chrX_11_10685001 chrX_10685001 RAL-894 2336 chrX 10719129 10719151 chrX 10719224 10719253 4 100 0.0 5.0 2.5 1.1 124 chrX 10719129 intron CG32676 - chrX 10719191 intron CG32676 - chrX 10719253 intron CG32676 - chrX_4_10715001 chrX_10715001 RAL-894 2337 chrX 10803039 10803042 chrX 10803121 10803126 4 87 9.0 7.5 8.2 0.4 87 chrX 10803039 intron Imp - chrX 10803082 intron Imp - chrX 10803126 intron Imp - chrX_4_10800001 chrX_10800001 RAL-894 2338 chrX 10970817 10970841 chrX 10970932 10970965 4 116 3.5 3.5 3.5 0.9 148 chrX 10970817 intron CG42339 - chrX 10970891 intron CG42339 - chrX 10970965 intron CG42339 - chrX_4_10970001 chrX_10970001 RAL-894 2339 chrX 11069143 11069177 chrX 11069306 11069340 8 163 1.0 2.0 1.5 3.2 197 chrX 11069143 intergenic not near genes chrX 11069242 intergenic not near genes chrX 11069340 intergenic not near genes chrX_8_11065001 chrX_11065001 RAL-894 2340 chrX 11095985 11096005 chrX 11103099 11103106 HMS-Beagle 7 7118 3.5 5.5 4.5 1.3 7121 chrX 11095985 intergenic not near genes chrX 11099546 intergenic not near genes chrX 11103106 intron CG42249 + chrX_7_11095001 chrX_11095001 RAL-894 2341 chrX 11141998 11142068 chrX 11142058 11142164 6 89 0.0 0.0 0.0 6.0 166 chrX 11141998 intergenic CG15199 - chrX 11142081 intergenic CG15199 -,CG15202 + chrX 11142164 intergenic CG15199 -,CG15202 + chrX_6_11140001 chrX_11140001 RAL-894 2342 chrX 11254151 11254193 chrX 11254282 11254308 7 125 4.5 1.0 2.8 1.8 157 chrX 11254151 intron CG44422 - chrX 11254230 intron CG44422 - chrX 11254308 intron CG44422 - chrX_7_11250001 chrX_11250001 RAL-894 2343 chrX 11379750 11379791 chrX 11379915 11379951 8 163 4.0 6.5 5.2 1.3 201 chrX 11379750 intron dlg1 + chrX 11379850 intron dlg1 + chrX 11379951 intron dlg1 + chrX_8_11375001 chrX_11375001 RAL-894 2344 chrX 11457779 11457813 chrX 11457879 11457893 7 92 4.0 6.5 5.2 1.1 114 chrX 11457779 intron HP5 + chrX 11457836 intron HP5 + chrX 11457893 intron HP5 + chrX_7_11455001 chrX_11455001 RAL-894 2345 chrX 11571456 11571482 chrX 11571698 11571738 pogo 7 251 4.0 5.0 4.5 1.3 282 chrX 11571456 3` UTR Kmn1 - chrX 11571597 3` UTR Kmn1 - chrX 11571738 3` UTR Kmn1 - chrX_7_11570001 chrX_11570001 RAL-894 2346 chrX 11633401 11633441 chrX 11640475 11640515 297 10 7074 3.5 7.0 5.2 1.6 7114 chrX 11633401 intron Ptp10D + chrX 11636958 intron Ptp10D + chrX 11640515 intron Ptp10D + chrX_10_11635001 chrX_11635001 RAL-894 2347 chrX 11762295 11762318 chrX 11762398 11762421 8 102 0.0 7.0 3.5 1.8 126 chrX 11762295 intron m + chrX 11762358 intron m + chrX 11762421 intron m + chrX_8_11760001 chrX_11760001 RAL-894 2348 chrX 11799006 11799037 chrX 11799112 11799143 6 103 2.0 4.5 3.2 1.4 137 chrX 11799006 intron CkIIbeta + chrX 11799074 intron CkIIbeta + chrX 11799143 intron CkIIbeta + chrX_6_11795001 chrX_11795001 RAL-894 2349 chrX 11804654 11804687 chrX 11804778 11804811 7 122 3.5 2.5 3.0 1.8 157 chrX 11804654 intron Hsc70-3 - chrX 11804732 intron Hsc70-3 - chrX 11804811 intron Hsc70-3 - chrX_7_11800001 chrX_11800001 RAL-894 2350 chrX 11922343 11922378 chrX 11922496 11922531 14 151 3.5 5.5 4.5 2.5 188 chrX 11922343 exon Sclp - chrX 11922437 intron Sclp - chrX 11922531 intron Sclp - chrX_14_11920001 chrX_11920001 RAL-894 2351 chrX 11936552 11936580 chrX 11936670 11936698 4 115 0.0 2.0 1.0 2.0 146 chrX 11936552 intron cac - chrX 11936625 intron cac - chrX 11936698 exon cac - chrX_4_11935001 chrX_11935001 RAL-894 2352 chrX 12002756 12002771 chrX 12002832 12002851 4 87 3.0 3.5 3.2 1.0 95 chrX 12002756 intron fw - chrX 12002804 intron fw - chrX 12002851 intron fw - chrX_4_12000001 chrX_12000001 RAL-894 2353 chrX 12038071 12038113 chrX 12038284 12038327 10 213 3.0 2.0 2.5 2.9 256 chrX 12038071 intergenic not near genes chrX 12038199 intergenic not near genes chrX 12038327 intergenic not near genes chrX_10_12035001 chrX_12035001 RAL-894 2354 chrX 12043846 12043858 chrX 12043931 12043967 6 102 1.5 3.0 2.2 1.9 121 chrX 12043846 5` UTR,5` UTR CR43960 +,Ten-a + chrX 12043906 5` UTR,5` UTR CR43960 +,Ten-a + chrX 12043967 5` UTR,5` UTR CR43960 +,Ten-a + chrX_6_12040001 chrX_12040001 RAL-894 2355 chrX 12094059 12094063 chrX 12094125 12094165 5 88 2.0 2.0 2.0 1.7 106 chrX 12094059 intron,intron CR43960 +,Ten-a + chrX 12094112 intron,intron CR43960 +,Ten-a + chrX 12094165 intron,intron CR43960 +,Ten-a + chrX_5_12090001 chrX_12090001 RAL-894 2356 chrX 12120411 12120458 chrX 12121037 12121084 10 621 2.0 3.0 2.5 2.9 673 chrX 12120411 intron Ten-a + chrX 12120748 intron Ten-a + chrX 12121084 intron Ten-a + chrX_10_12120001 chrX_12120001 RAL-894 2357 chrX 12176737 12176751 chrX 12176833 12176842 6 94 1.5 4.0 2.8 1.6 105 chrX 12176737 intron,3` UTR Ten-a +,CG1924 - chrX 12176790 intron,3` UTR Ten-a +,CG1924 - chrX 12176842 intron,3` UTR Ten-a +,CG1924 - chrX_6_12175001 chrX_12175001 RAL-894 2358 chrX 12176756 12176769 chrX 12176828 12176863 4 86 1.0 3.5 2.2 1.2 107 chrX 12176756 intron,3` UTR Ten-a +,CG1924 - chrX 12176810 intron,3` UTR Ten-a +,CG1924 - chrX 12176863 intron,3` UTR Ten-a +,CG1924 - chrX_4_12175001 chrX_12175001 RAL-894 2359 chrX 12272829 12272868 chrX 12272928 12272967 7 99 2.0 1.0 1.5 2.8 138 chrX 12272829 intron Ten-a + chrX 12272898 intron Ten-a + chrX 12272967 intron Ten-a + chrX_7_12270001 chrX_12270001 RAL-894 2360 chrX 12375475 12375513 chrX 12375593 12375617 8 114 2.0 1.0 1.5 3.2 142 chrX 12375475 intergenic Ir11a - chrX 12375546 intergenic Ir11a - chrX 12375617 exon Ir11a - chrX_8_12375001 chrX_12375001 RAL-894 2361 chrX 12430948 12430963 chrX 12431046 12431061 4 98 0.5 2.0 1.2 1.8 113 chrX 12430948 intergenic not near genes chrX 12431004 intergenic not near genes chrX 12431061 intergenic not near genes chrX_4_12430001 chrX_12430001 RAL-894 2362 chrX 12440388 12440402 chrX 12440490 12440504 5 102 0.0 8.0 4.0 1.0 116 chrX 12440388 intron Pkcdelta + chrX 12440446 intron Pkcdelta + chrX 12440504 intron Pkcdelta + chrX_5_12440001 chrX_12440001 RAL-894 2363 chrX 12442073 12442110 chrX 12442175 12442200 6 100 5.5 0.0 2.8 1.6 127 chrX 12442073 intron Pkcdelta + chrX 12442136 intron Pkcdelta + chrX 12442200 intron Pkcdelta + chrX_6_12440001 chrX_12440001 RAL-894 2364 chrX 12557456 12557488 chrX 12557554 12557575 4 96 0.5 0.0 0.2 3.3 119 chrX 12557456 intron CG43921 - chrX 12557516 intron CG43921 - chrX 12557575 intron CG43921 - chrX_4_12555001 chrX_12555001 RAL-894 2365 chrX 12930577 12930590 chrX 12937713 12937726 HMS-Beagle 5 7136 8.5 8.5 8.5 0.5 7149 chrX 12930577 intron fne + chrX 12934152 intron fne + chrX 12937726 intron fne + chrX_5_12930001 chrX_12930001 RAL-894 2366 chrX 12960751 12960791 chrX 12960852 12960892 9 100 4.0 5.0 4.5 1.6 141 chrX 12960751 3` UTR CG32642 + chrX 12960822 intergenic CG32642 + chrX 12960892 intergenic CG32642 + chrX_9_12960001 chrX_12960001 RAL-894 2367 chrX 13061348 13061373 chrX 13061467 13061503 4 125 2.5 1.5 2.0 1.3 155 chrX 13061348 intron rad + chrX 13061426 intron rad + chrX 13061503 intron rad + chrX_4_13060001 chrX_13060001 RAL-894 2368 chrX 13146575 13146631 chrX 13146683 13146739 15 108 4.5 1.5 3.0 3.8 164 chrX 13146575 intron CG32645 + chrX 13146657 intron CG32645 + chrX 13146739 intron CG32645 + chrX_15_13145001 chrX_13145001 RAL-894 2369 chrX 13172334 13172382 chrX 13172430 13172478 11 88 1.5 2.0 1.8 3.9 144 chrX 13172334 exon CG34411 - chrX 13172406 intron CG34411 - chrX 13172478 intron CG34411 - chrX_11_13170001 chrX_13170001 RAL-894 2370 chrX 13225895 13225916 chrX 13226014 13226035 4 119 3.0 4.0 3.5 0.9 140 chrX 13225895 intron mew - chrX 13225965 intron mew - chrX 13226035 intron mew - chrX_4_13225001 chrX_13225001 RAL-894 2371 chrX 13236887 13236896 chrX 13236972 13237001 7 98 0.5 5.5 3.0 1.8 114 chrX 13236887 intron mew - chrX 13236944 intron mew - chrX 13237001 intron mew - chrX_7_13235001 chrX_13235001 RAL-894 2372 chrX 13296160 13296169 chrX 13296341 13296347 4 179 5.0 0.0 2.5 1.1 187 chrX 13296160 intron CG1764 - chrX 13296254 intron CG1764 - chrX 13296347 intron CG1764 - chrX_4_13295001 chrX_13295001 RAL-894 2373 chrX 13314411 13314425 chrX 13314526 13314540 6 115 3.0 0.0 1.5 2.4 129 chrX 13314411 intron IP3K2 + chrX 13314476 intron IP3K2 + chrX 13314540 intron IP3K2 + chrX_6_13310001 chrX_13310001 RAL-894 2374 chrX 13329304 13329359 chrX 13329418 13329465 7 111 0.0 1.0 0.5 4.7 161 chrX 13329304 intergenic IP3K2 + chrX 13329384 intergenic IP3K2 +,Jafrac1 + chrX 13329465 intergenic IP3K2 +,Jafrac1 + chrX_7_13325001 chrX_13325001 RAL-894 2375 chrX 13374824 13374867 chrX 13374916 13374967 4 87 3.0 1.5 2.2 1.2 143 chrX 13374824 intron CG1640 + chrX 13374896 intron CG1640 + chrX 13374967 intron CG1640 + chrX_4_13370001 chrX_13370001 RAL-894 2376 chrX 13401473 13401516 chrX 13401840 13401856 jockey 9 366 2.5 4.5 3.5 2.0 383 chrX 13401473 intergenic CG1673 +,CG12725 - chrX 13401664 intergenic CG12725 -,CG1673 + chrX 13401856 3` UTR CG12725 - chrX_9_13400001 chrX_13400001 RAL-894 2377 chrX 13429456 13429484 chrX 13430613 13430653 jockey 12 1164 4.5 3.5 4.0 2.4 1197 chrX 13429456 intergenic not near genes chrX 13430054 intergenic not near genes chrX 13430653 intergenic not near genes chrX_12_13430001 chrX_13430001 RAL-894 2378 chrX 13463628 13463675 chrX 13469225 13469272 mdg3 17 5595 4.0 2.5 3.2 4.0 5644 chrX 13463628 intron Neto + chrX 13466450 intron Neto + chrX 13469272 intron Neto + chrX_17_13465001 chrX_13465001 RAL-894 2379 chrX 13507297 13507306 chrX 13507397 13507407 4 100 2.0 3.5 2.8 1.1 110 chrX 13507297 intron Neto + chrX 13507352 intron Neto + chrX 13507407 intron Neto + chrX_4_13505001 chrX_13505001 RAL-894 2380 chrX 13603845 13603857 chrX 13603951 13603963 4 106 1.5 5.0 3.2 1.0 118 chrX 13603845 intergenic not near genes chrX 13603904 intergenic CR44654 + chrX 13603963 intergenic CR44654 + chrX_4_13600001 chrX_13600001 RAL-894 2381 chrX 13777678 13777696 chrX 13777786 13777804 4 108 4.5 6.0 5.2 0.6 126 chrX 13777678 3` UTR rdgB + chrX 13777741 3` UTR rdgB + chrX 13777804 3` UTR rdgB + chrX_4_13775001 chrX_13775001 RAL-894 2382 chrX 13935507 13935525 chrX 13935598 13935628 6 101 2.0 9.5 5.8 0.9 121 chrX 13935507 intron mamo - chrX 13935568 intron mamo - chrX 13935628 intron mamo - chrX_6_13935001 chrX_13935001 RAL-894 2383 chrX 13057297 13057304 chrX 13966949 13966949 7 909646 10.0 6.5 8.2 0.8 909652 chrX 13057297 intron rad + chrX 13512123 intron Neto + chrX 13966949 intron mamo - chrX_7_13510001 chrX_13510001 RAL-894 2384 chrX 14122598 14122649 chrX 14122694 14122745 7 94 0.5 2.0 1.2 3.2 147 chrX 14122598 intergenic not near genes chrX 14122672 intergenic not near genes chrX 14122745 intergenic not near genes chrX_7_14120001 chrX_14120001 RAL-894 2385 chrX 14157583 14157596 chrX 14163260 14163273 297 5 5677 4.0 2.5 3.2 1.2 5690 chrX 14157583 intergenic not near genes chrX 14160428 intergenic not near genes chrX 14163273 intergenic not near genes chrX_5_14160001 chrX_14160001 RAL-894 2386 chrX 14174196 14174214 chrX 14174296 14174314 6 99 3.5 4.5 4.0 1.2 118 chrX 14174196 intergenic not near genes chrX 14174255 intergenic CG1368 + chrX 14174314 intergenic CG1368 + chrX_6_14170001 chrX_14170001 RAL-894 2387 chrX 14180125 14180154 chrX 14180228 14180233 4 98 0.0 0.0 0.0 4.0 108 chrX 14180125 intergenic not near genes chrX 14180179 intergenic not near genes chrX 14180233 intergenic not near genes chrX_4_14180001 chrX_14180001 RAL-894 2388 chrX 14190740 14190767 chrX 14191016 14191042 4 276 2.5 1.5 2.0 1.3 302 chrX 14190740 3` UTR CG11585 + chrX 14190891 intergenic CG11585 +,CG13403 - chrX 14191042 intergenic CG13403 -,CG11585 + chrX_4_14190001 chrX_14190001 RAL-894 2389 chrX 14407246 14407298 chrX 14407348 14407356 7 96 0.0 2.0 1.0 3.5 110 chrX 14407246 intron dpr8 + chrX 14407301 intron dpr8 + chrX 14407356 intron dpr8 + chrX_7_14405001 chrX_14405001 RAL-894 2390 chrX 14416287 14416319 chrX 14421076 14421106 F-element 6 4787 2.0 1.5 1.8 2.1 4819 chrX 14416287 intron dpr8 + chrX 14418696 intron dpr8 + chrX 14421106 intron dpr8 + chrX_6_14415001 chrX_14415001 RAL-894 2391 chrX 14516188 14516221 chrX 14516280 14516309 10 93 2.5 2.0 2.2 3.1 121 chrX 14516188 intergenic not near genes chrX 14516248 intergenic not near genes chrX 14516309 intergenic not near genes chrX_10_14515001 chrX_14515001 RAL-894 2392 chrX 14589685 14589707 chrX 14589942 14589963 pogo 4 255 2.5 3.5 3.0 1.0 278 chrX 14589685 intron CG9413 - chrX 14589824 intron CG9413 - chrX 14589963 intron CG9413 - chrX_4_14585001 chrX_14585001 RAL-894 2393 chrX 14636457 14636482 chrX 14641908 14641943 I-element 6 5458 4.0 2.0 3.0 1.5 5486 chrX 14636457 intron NetA - chrX 14639200 intron NetA - chrX 14641943 intron NetA - chrX_6_14635001 chrX_14635001 RAL-894 2394 chrX 14778017 14778054 chrX 14782834 14782871 Doc 5 4816 5.5 7.0 6.2 0.7 4854 chrX 14778017 intergenic CG5347 + chrX 14780444 intergenic not near genes chrX 14782871 intergenic Ag5r2 - chrX_5_14780001 chrX_14780001 RAL-894 2395 chrX 14861924 14861944 chrX 14862139 14862156 5 205 16.5 20.5 18.5 0.3 232 chrX 14861924 intron Flo2 + chrX 14862040 intron Flo2 + chrX 14862156 intron Flo2 + chrX_5_14860001 chrX_14860001 RAL-894 2396 chrX 14936849 14936885 chrX 14946117 14946162 roo 7 9276 5.0 3.0 4.0 1.4 9313 chrX 14936849 intron pdgy - chrX 14941506 intron pdgy - chrX 14946162 intron pdgy - chrX_7_14940001 chrX_14940001 RAL-894 2397 chrX 15019096 15019096 chrX 17838033 17838064 4 2818954 13.0 2.5 7.8 0.5 2818968 chrX 15019096 intron hiw - chrX 16428580 intron hang + chrX 17838064 intron CG6398 + chrX_4_16425001 chrX_16425001 RAL-894 2398 chrX 15234354 15234390 chrX 15234454 15234493 9 102 3.5 5.0 4.2 1.7 139 chrX 15234354 intergenic not near genes chrX 15234424 intergenic not near genes chrX 15234493 intergenic not near genes chrX_9_15230001 chrX_15230001 RAL-894 2399 chrX 15421912 15421949 chrX 15423433 15423479 pogo 6 1520 2.0 2.0 2.0 2.0 1567 chrX 15421912 intron Cngl - chrX 15422696 intron Cngl - chrX 15423479 intron Cngl - chrX_6_15420001 chrX_15420001 RAL-894 2400 chrX 15435688 15435704 chrX 15436116 15436147 rover 6 445 3.5 4.5 4.0 1.2 459 chrX 15435688 intron Cngl - chrX 15435918 intron Cngl - chrX 15436147 intron Cngl - chrX_6_15435001 chrX_15435001 RAL-894 2401 chrX 15497581 15497604 chrX 15497691 15497714 4 110 1.0 0.0 0.5 2.7 133 chrX 15497581 intron,3` UTR Gmap +,CR44888 - chrX 15497648 intron,3` UTR Gmap +,CR44888 - chrX 15497714 intron,3` UTR Gmap +,CR44888 - chrX_4_15495001 chrX_15495001 RAL-894 2402 chrX 4275590 4275590 chrX 15627327 15627327 4 11351737 3.0 16.5 9.8 0.4 11351737 chrX 4275590 3` UTR CR45483 - chrX 9951458 intergenic not near genes chrX 15627327 intron sog - chrX_4_9950001 chrX_9950001 RAL-894 2403 chrX 15634002 15634026 chrX 15634399 15634423 6 397 1.0 1.0 1.0 3.0 421 chrX 15634002 intergenic not near genes chrX 15634212 intergenic not near genes chrX 15634423 intergenic not near genes chrX_6_15630001 chrX_15630001 RAL-894 2404 chrX 15681391 15681426 chrX 15681477 15681508 6 96 1.0 3.0 2.0 2.0 117 chrX 15681391 intergenic not near genes chrX 15681450 intergenic not near genes chrX 15681508 intergenic not near genes chrX_6_15680001 chrX_15680001 RAL-894 2405 chrX 15749662 15749683 chrX 15749785 15749806 11 122 1.5 2.0 1.8 3.9 144 chrX 15749662 intron CG8239 + chrX 15749734 intron CG8239 + chrX 15749806 intron CG8239 + chrX_11_15745001 chrX_15745001 RAL-894 2406 chrX 15938501 15938547 chrX 15938602 15938649 8 101 4.0 5.5 4.8 1.4 148 chrX 15938501 intron Stim - chrX 15938575 intron Stim - chrX 15938649 intron Stim - chrX_8_15935001 chrX_15935001 RAL-894 2407 chrX 16078585 16078634 chrX 16078712 16078735 6 120 2.5 6.0 4.2 1.2 150 chrX 16078585 3` UTR Tob - chrX 16078660 3` UTR Tob - chrX 16078735 3` UTR Tob - chrX_6_16075001 chrX_16075001 RAL-894 2408 chrX 16100540 16100590 chrX 16100639 16100690 7 90 1.5 1.0 1.2 3.2 150 chrX 16100540 intron,intron CG42353 -,CG42354 - chrX 16100615 intron,intron CG42353 -,CG42354 - chrX 16100690 intron,intron CG42353 -,CG42354 - chrX_7_16100001 chrX_16100001 RAL-894 2409 chrX 16172892 16172919 chrX 16173008 16173037 7 120 3.0 1.0 2.0 2.3 145 chrX 16172892 intergenic not near genes chrX 16172964 intergenic not near genes chrX 16173037 intergenic not near genes chrX_7_16170001 chrX_16170001 RAL-894 2410 chrX 16222760 16222810 chrX 16231128 16231151 roo 17 8367 3.0 4.5 3.8 3.5 8391 chrX 16222760 intergenic not near genes chrX 16226956 intergenic not near genes chrX 16231151 intergenic not near genes chrX_17_16225001 chrX_16225001 RAL-894 2411 chrX 16295509 16295531 chrX 16295613 16295635 8 103 5.0 0.5 2.8 2.1 126 chrX 16295509 intron CG9911 - chrX 16295572 intron CG9911 - chrX 16295635 intron CG9911 - chrX_8_16295001 chrX_16295001 RAL-894 2412 chrX 16340659 16340698 chrX 16349834 16349875 roo 5 9169 2.5 4.0 3.2 1.2 9216 chrX 16340659 intergenic Dsp1 + chrX 16345267 intergenic not near genes chrX 16349875 intergenic sl + chrX_5_16345001 chrX_16345001 RAL-894 2413 chrX 16492625 16492669 chrX 16498222 16498266 mdg3 17 5594 7.5 3.0 5.2 2.7 5641 chrX 16492625 intron para - chrX 16495446 intron para - chrX 16498266 intron para - chrX_17_16495001 chrX_16495001 RAL-894 2414 chrX 16623463 16623482 chrX 16623569 16623587 6 105 1.0 0.0 0.5 4.0 124 chrX 16623463 intergenic not near genes chrX 16623525 intergenic Rok - chrX 16623587 intergenic Rok - chrX_6_16620001 chrX_16620001 RAL-894 2415 chrX 16668751 16668804 chrX 16668848 16668903 12 96 3.0 2.5 2.8 3.2 152 chrX 16668751 intergenic r +,CG13012 - chrX 16668827 3` UTR CG13012 - chrX 16668903 3` UTR CG13012 - chrX_12_16665001 chrX_16665001 RAL-894 2416 chrX 16689608 16689654 chrX 16689712 16689750 5 94 1.0 1.0 1.0 2.5 142 chrX 16689608 intron Sep4 - chrX 16689679 intron Sep4 - chrX 16689750 intron Sep4 - chrX_5_16685001 chrX_16685001 RAL-894 2417 chrX 16690434 16690476 chrX 16690530 16690550 11 86 0.5 1.0 0.8 6.1 116 chrX 16690434 intron Sep4 - chrX 16690492 intron Sep4 - chrX 16690550 intron Sep4 - chrX_11_16690001 chrX_16690001 RAL-894 2418 chrX 16815354 16815381 chrX 16815450 16815468 7 93 3.0 1.5 2.2 2.2 114 chrX 16815354 intron CG4829 + chrX 16815411 intron CG4829 + chrX 16815468 intron CG4829 + chrX_7_16815001 chrX_16815001 RAL-894 2419 chrX 17052917 17052926 chrX 17053018 17053025 4 100 0.5 0.0 0.2 3.3 108 chrX 17052917 intron CG45002 - chrX 17052971 intron CG45002 - chrX 17053025 intron CG45002 - chrX_4_17050001 chrX_17050001 RAL-894 2420 chrX 17057923 17057965 chrX 17058184 17058226 pogo 8 261 3.0 7.5 5.2 1.3 303 chrX 17057923 intron CG45002 - chrX 17058074 intron CG45002 - chrX 17058226 intron CG45002 - chrX_8_17055001 chrX_17055001 RAL-894 2421 chrX 17063158 17063203 chrX 17063265 17063309 16 105 2.0 3.0 2.5 4.6 151 chrX 17063158 intron CG45002 - chrX 17063234 intron CG45002 - chrX 17063309 intron CG45002 - chrX_16_17060001 chrX_17060001 RAL-894 2422 chrX 17112249 17112250 chrX 17112336 17112352 4 96 0.0 10.5 5.2 0.6 103 chrX 17112249 intron CG5004 + chrX 17112300 intron CG5004 + chrX 17112352 intron CG5004 + chrX_4_17110001 chrX_17110001 RAL-894 2423 chrX 17148575 17148619 chrX 17148674 17148718 13 98 1.5 3.0 2.2 4.1 143 chrX 17148575 intergenic RpS5a -,CG5010 + chrX 17148646 intergenic CG5010 +,RpS5a - chrX 17148718 intergenic CG5010 +,RpS5a - chrX_13_17145001 chrX_17145001 RAL-894 2424 chrX 17195185 17195228 chrX 17200291 17200329 flea 9 5100 6.5 3.5 5.0 1.5 5144 chrX 17195185 3` UTR baz + chrX 17197757 3` UTR baz + chrX 17200329 3` UTR baz + chrX_9_17195001 chrX_17195001 RAL-894 2425 chrX 17205834 17205851 chrX 17205944 17205961 4 110 1.5 2.5 2.0 1.3 127 chrX 17205834 intergenic not near genes chrX 17205898 intergenic not near genes chrX 17205961 intergenic CG32564 + chrX_4_17205001 chrX_17205001 RAL-894 2426 chrX 17303897 17303932 chrX 17304002 17304038 11 106 1.0 5.0 3.0 2.8 141 chrX 17303897 intron CG5445 + chrX 17303968 intron CG5445 + chrX 17304038 intron CG5445 + chrX_11_17300001 chrX_17300001 RAL-894 2427 chrX 17352576 17352619 chrX 17352690 17352742 15 119 0.0 2.0 1.0 7.5 166 chrX 17352576 intergenic not near genes chrX 17352659 intergenic not near genes chrX 17352742 intergenic not near genes chrX_15_17350001 chrX_17350001 RAL-894 2428 chrX 17372212 17372220 chrX 17372321 17372329 7 109 1.5 2.5 2.0 2.3 117 chrX 17372212 intergenic not near genes chrX 17372270 intergenic not near genes chrX 17372329 intergenic not near genes chrX_7_17370001 chrX_17370001 RAL-894 2429 chrX 17544990 17545039 chrX 17545092 17545125 6 96 1.5 2.5 2.0 2.0 135 chrX 17544990 intron CG43658 - chrX 17545058 intron CG43658 - chrX 17545125 intron CG43658 - chrX_6_17545001 chrX_17545001 RAL-894 2430 chrX 17680885 17680917 chrX 17680973 17681014 9 87 2.5 4.5 3.5 2.0 129 chrX 17680885 intron chas - chrX 17680950 intron chas - chrX 17681014 intron chas - chrX_9_17680001 chrX_17680001 RAL-894 2431 chrX 17731100 17731118 chrX 17731196 17731214 4 96 3.0 6.0 4.5 0.7 114 chrX 17731100 intron CG42684 + chrX 17731157 intron CG42684 + chrX 17731214 intron CG42684 + chrX_4_17730001 chrX_17730001 RAL-894 2432 chrX 17741322 17741370 chrX 17741485 17741536 5 162 0.0 3.0 1.5 2.0 214 chrX 17741322 intron CG42684 + chrX 17741429 intron CG42684 + chrX 17741536 intron CG42684 + chrX_5_17740001 chrX_17740001 RAL-894 2433 chrX 17744101 17744122 chrX 17744191 17744222 5 96 4.5 2.0 3.2 1.2 121 chrX 17744101 intron CG42684 + chrX 17744162 intron CG42684 + chrX 17744222 intron CG42684 + chrX_5_17740001 chrX_17740001 RAL-894 2434 chrX 17782209 17782239 chrX 17782327 17782357 4 114 2.0 2.0 2.0 1.3 148 chrX 17782209 intergenic not near genes chrX 17782283 intergenic not near genes chrX 17782357 intergenic not near genes chrX_4_17780001 chrX_17780001 RAL-894 2435 chrX 17968894 17968920 chrX 17969032 17969057 7 138 2.5 5.0 3.8 1.5 163 chrX 17968894 intron Sh - chrX 17968976 intron Sh - chrX 17969057 intron Sh - chrX_7_17965001 chrX_17965001 RAL-894 2436 chrX 18148616 18148625 chrX 18148739 18148748 5 123 6.0 1.0 3.5 1.1 132 chrX 18148616 intergenic not near genes chrX 18148682 intergenic not near genes chrX 18148748 intergenic not near genes chrX_5_18145001 chrX_18145001 RAL-894 2437 chrX 18194049 18194103 chrX 18194604 18194658 BS 16 553 2.5 1.5 2.0 5.3 609 chrX 18194049 intron Frq2 + chrX 18194354 intron Frq2 + chrX 18194658 intron Frq2 + chrX_16_18190001 chrX_18190001 RAL-894 2438 chrX 18429490 18429523 chrX 18434820 18434854 Transpac 6 5330 2.0 4.5 3.2 1.4 5364 chrX 18429490 intergenic not near genes chrX 18432172 intergenic not near genes chrX 18434854 intergenic not near genes chrX_6_18430001 chrX_18430001 RAL-894 2439 chrX 18440947 18440997 chrX 18441044 18441093 12 92 3.0 0.5 1.8 4.3 146 chrX 18440947 intergenic CG32548 - chrX 18441020 intergenic CG32548 - chrX 18441093 intergenic not near genes chrX_12_18440001 chrX_18440001 RAL-894 2440 chrX 18558766 18558797 chrX 18558868 18558894 8 98 0.0 3.0 1.5 3.2 128 chrX 18558766 intron Bx + chrX 18558830 intron Bx + chrX 18558894 intron Bx + chrX_8_18555001 chrX_18555001 RAL-894 2441 chrX 18645008 18645041 chrX 18645126 18645156 11 117 4.0 2.5 3.2 2.6 148 chrX 18645008 intron Rip11 - chrX 18645082 intron Rip11 - chrX 18645156 intron Rip11 - chrX_11_18645001 chrX_18645001 RAL-894 2442 chrX 18749625 18749647 chrX 18749714 18749751 7 96 3.0 0.5 1.8 2.5 126 chrX 18749625 intergenic not near genes chrX 18749688 intergenic not near genes chrX 18749751 intergenic not near genes chrX_7_18745001 chrX_18745001 RAL-894 2443 chrX 18896500 18896548 chrX 18896631 18896679 12 130 2.0 3.5 2.8 3.2 179 chrX 18896500 3` UTR CG7349 + chrX 18896590 intergenic CG7349 + chrX 18896679 intergenic CG7349 + chrX_12_18895001 chrX_18895001 RAL-894 2444 chrX 18957050 18957080 chrX 18965733 18965763 roo 4 8678 5.0 4.5 4.8 0.7 8713 chrX 18957050 intron CG43759 + chrX 18961406 intron CG43759 + chrX 18965763 intron CG43759 + chrX_4_18960001 chrX_18960001 RAL-894 2445 chrX 19060393 19060407 chrX 19065197 19065211 Doc 6 4804 7.0 2.5 4.8 1.0 4818 chrX 19060393 intron CG14190 + chrX 19062802 intron CG14190 + chrX 19065211 intron CG14190 + chrX_6_19060001 chrX_19060001 RAL-894 2446 chrX 19098751 19098762 chrX 19098849 19098859 4 98 3.5 2.0 2.8 1.1 108 chrX 19098751 intergenic not near genes chrX 19098805 intergenic not near genes chrX 19098859 intergenic not near genes chrX_4_19095001 chrX_19095001 RAL-894 2447 chrX 19099641 19099687 chrX 19099737 19099790 7 101 0.5 1.0 0.8 3.9 149 chrX 19099641 intergenic not near genes chrX 19099716 intergenic not near genes chrX 19099790 intergenic not near genes chrX_7_19095001 chrX_19095001 RAL-894 2448 chrX 19124427 19124463 chrX 19124535 19124572 6 108 2.0 3.5 2.8 1.6 145 chrX 19124427 intergenic CG15882 - chrX 19124500 intergenic CG15882 - chrX 19124572 intergenic CG15882 -,tgy - chrX_6_19120001 chrX_19120001 RAL-894 2449 chrX 19131972 19131998 chrX 19132074 19132101 6 96 2.0 7.0 4.5 1.1 129 chrX 19131972 intergenic not near genes chrX 19132036 intergenic not near genes chrX 19132101 intergenic not near genes chrX_6_19130001 chrX_19130001 RAL-894 2450 chrX 19136539 19136583 chrX 19143478 19143517 412 11 6933 4.0 4.0 4.0 2.2 6978 chrX 19136539 intergenic not near genes chrX 19140028 intergenic not near genes chrX 19143517 3` UTR RhoGAP18B - chrX_11_19140001 chrX_19140001 RAL-894 2451 chrX 19356977 19357023 chrX 19358438 19358502 NOF 7 1469 4.5 1.0 2.8 1.8 1525 chrX 19356977 intron kek5 + chrX 19357740 intron kek5 + chrX 19358502 intron kek5 + chrX_7_19355001 chrX_19355001 RAL-894 2452 chrX 19380148 19380169 chrX 19380409 19380430 pogo 6 259 5.0 3.5 4.2 1.2 282 chrX 19380148 intron kek5 + chrX 19380289 intron kek5 + chrX 19380430 intron kek5 + chrX_6_19380001 chrX_19380001 RAL-894 2453 chrX 19380173 19380186 chrX 19380401 19380447 pogo 6 251 3.0 3.5 3.2 1.4 274 chrX 19380173 intron kek5 + chrX 19380310 intron kek5 + chrX 19380447 intron kek5 + chrX_6_19380001 chrX_19380001 RAL-894 2454 chrX 19395876 19395903 chrX 19396140 19396177 7 272 8.0 4.0 6.0 1.0 301 chrX 19395876 intron kek5 + chrX 19396026 intron kek5 + chrX 19396177 intron kek5 + chrX_7_19395001 chrX_19395001 RAL-894 2455 chrX 19542127 19542163 chrX 19542245 19542281 4 118 1.5 4.0 2.8 1.1 154 chrX 19542127 intron CG32532 - chrX 19542204 intron CG32532 - chrX 19542281 intron CG32532 - chrX_4_19540001 chrX_19540001 RAL-894 2456 chrX 19662010 19662052 chrX 19662253 19662295 8 240 1.5 3.0 2.2 2.5 285 chrX 19662010 intron CG14223 - chrX 19662152 intron CG14223 - chrX 19662295 intron CG14223 - chrX_8_19660001 chrX_19660001 RAL-894 2457 chrX 19680390 19680399 chrX 19680504 19680543 5 138 4.5 2.0 3.2 1.2 153 chrX 19680390 intron dome - chrX 19680466 intron dome - chrX 19680543 intron dome - chrX_5_19680001 chrX_19680001 RAL-894 2458 chrX 19689395 19689439 chrX 19689488 19689537 7 91 1.5 3.5 2.5 2.0 142 chrX 19689395 intergenic Mer -,CG14227 - chrX 19689466 intergenic Mer - chrX 19689537 intergenic Mer - chrX_7_19685001 chrX_19685001 RAL-894 2459 chrX 19710051 19710100 chrX 19711857 19711893 S-element 12 1794 2.0 1.5 1.8 4.3 1842 chrX 19710051 intron meso18E - chrX 19710972 intron meso18E - chrX 19711893 intron meso18E - chrX_12_19710001 chrX_19710001 RAL-894 2460 chrX 19791239 19791274 chrX 19791353 19791367 5 110 4.0 1.5 2.8 1.3 128 chrX 19791239 intergenic not near genes chrX 19791303 intergenic not near genes chrX 19791367 intergenic not near genes chrX_5_19790001 chrX_19790001 RAL-894 2461 chrX 19897363 19897415 chrX 19897460 19897512 10 94 6.0 4.5 5.2 1.6 149 chrX 19897363 intron Hers + chrX 19897438 intron Hers + chrX 19897512 intron Hers + chrX_10_19895001 chrX_19895001 RAL-894 2462 chrX 19981994 19982022 chrX 19982101 19982114 4 104 3.5 2.5 3.0 1.0 120 chrX 19981994 intergenic not near genes chrX 19982054 intergenic not near genes chrX 19982114 intergenic not near genes chrX_4_19980001 chrX_19980001 RAL-894 2463 chrX 19983861 19983891 chrX 19983950 19983986 4 96 0.0 3.5 1.8 1.4 125 chrX 19983861 intergenic not near genes chrX 19983924 intergenic not near genes chrX 19983986 intergenic not near genes chrX_4_19980001 chrX_19980001 RAL-894 2464 chrX 20041517 20041559 chrX 20041617 20041659 9 100 1.0 2.5 1.8 3.2 142 chrX 20041517 intron Dop2R - chrX 20041588 intron Dop2R - chrX 20041659 intron Dop2R - chrX_9_20040001 chrX_20040001 RAL-894 2465 chrX 20047771 20047809 chrX 20048018 20048052 4 241 3.0 1.5 2.2 1.2 281 chrX 20047771 intron Dop2R - chrX 20047912 intron Dop2R - chrX 20048052 intron Dop2R - chrX_4_20045001 chrX_20045001 RAL-894 2466 chrX 20052769 20052815 chrX 20052873 20052893 4 97 1.0 2.0 1.5 1.6 124 chrX 20052769 intron Dop2R - chrX 20052831 intron Dop2R - chrX 20052893 intron Dop2R - chrX_4_20050001 chrX_20050001 RAL-894 2467 chrX 20065785 20065822 chrX 20065884 20065921 10 99 4.0 3.5 3.8 2.1 136 chrX 20065785 intergenic not near genes chrX 20065853 intergenic not near genes chrX 20065921 intergenic not near genes chrX_10_20065001 chrX_20065001 RAL-894 2468 chrX 20279737 20279775 chrX 20279838 20279876 8 99 1.5 3.0 2.2 2.5 139 chrX 20279737 intergenic not near genes chrX 20279806 intergenic not near genes chrX 20279876 intergenic not near genes chrX_8_20275001 chrX_20275001 RAL-894 2469 chrX 20312865 20312898 chrX 20312963 20312995 7 94 2.5 3.5 3.0 1.8 130 chrX 20312865 intron CG1504 - chrX 20312930 intron CG1504 - chrX 20312995 intron CG1504 - chrX_7_20310001 chrX_20310001 RAL-894 2470 chrX 20369304 20369341 chrX 20369405 20369441 10 102 0.5 1.5 1.0 5.0 137 chrX 20369304 intergenic not near genes chrX 20369372 intergenic not near genes chrX 20369441 intergenic not near genes chrX_10_20365001 chrX_20365001 RAL-894 2471 chrX 20377335 20377344 chrX 20378782 20378831 hobo 5 1476 2.0 0.5 1.2 2.3 1496 chrX 20377335 intergenic not near genes chrX 20378083 intergenic not near genes chrX 20378831 intergenic not near genes chrX_5_20375001 chrX_20375001 RAL-894 2472 chrX 20435431 20435475 chrX 20435540 20435576 9 105 2.0 3.5 2.8 2.4 145 chrX 20435431 intron CG1695 + chrX 20435504 intron CG1695 + chrX 20435576 intron CG1695 + chrX_9_20435001 chrX_20435001 RAL-894 2473 chrX 20467995 20468028 chrX 20468104 20468116 7 102 3.5 0.0 1.8 2.5 121 chrX 20467995 intron GstT3 + chrX 20468056 intron GstT3 + chrX 20468116 intron GstT3 + chrX_7_20465001 chrX_20465001 RAL-894 2474 chrX 20493913 20493925 chrX 20494094 20494096 4 178 0.0 6.0 3.0 1.0 183 chrX 20493913 intron RhoGAP19D - chrX 20494004 intron RhoGAP19D - chrX 20494096 intron RhoGAP19D - chrX_4_20490001 chrX_20490001 RAL-894 2475 chrX 20518765 20518791 chrX 20518864 20518890 5 98 2.5 5.0 3.8 1.0 125 chrX 20518765 intron Tak1 - chrX 20518828 intron Tak1 - chrX 20518890 intron Tak1 - chrX_5_20515001 chrX_20515001 RAL-894 2476 chrX 20546545 20546565 chrX 20546715 20546751 5 182 0.5 0.5 0.5 3.3 206 chrX 20546545 intron RunxB + chrX 20546648 intron RunxB + chrX 20546751 intron RunxB + chrX_5_20545001 chrX_20545001 RAL-894 2477 chrX 20578149 20578185 chrX 20578281 20578322 8 135 1.0 3.5 2.2 2.5 173 chrX 20578149 intergenic not near genes chrX 20578236 intergenic not near genes chrX 20578322 intergenic not near genes chrX_8_20575001 chrX_20575001 RAL-894 2478 chrX 20587539 20587568 chrX 20587685 20587696 5 141 0.5 0.5 0.5 3.3 157 chrX 20587539 intergenic not near genes chrX 20587618 intergenic not near genes chrX 20587696 intergenic not near genes chrX_5_20585001 chrX_20585001 RAL-894 2479 chrX 20662303 20662341 chrX 20662401 20662439 6 87 3.0 0.0 1.5 2.4 136 chrX 20662303 intron CG1835 + chrX 20662371 intron CG1835 + chrX 20662439 intron CG1835 + chrX_6_20660001 chrX_20660001 RAL-894 2480 chrX 20710413 20710439 chrX 20710506 20710537 6 97 1.0 2.5 1.8 2.1 124 chrX 20710413 intergenic not near genes chrX 20710475 intergenic not near genes chrX 20710537 intergenic not near genes chrX_6_20710001 chrX_20710001 RAL-894 2481 chrX 20836714 20836758 chrX 20844330 20844375 roo 10 7621 3.5 2.0 2.8 2.6 7661 chrX 20836714 intron shakB - chrX 20840544 intron shakB - chrX 20844375 intron shakB - chrX_10_20840001 chrX_20840001 RAL-894 2482 chrX 20897922 20897950 chrX 20898032 20898033 5 104 1.5 0.0 0.8 2.8 111 chrX 20897922 intron shakB - chrX 20897978 intron shakB - chrX 20898033 intron shakB - chrX_5_20895001 chrX_20895001 RAL-894 2483 chrX 20915043 20915071 chrX 20915218 20915262 10 188 2.5 1.0 1.8 3.6 219 chrX 20915043 intron shakB - chrX 20915152 intron shakB - chrX 20915262 intron shakB - chrX_10_20915001 chrX_20915001 RAL-894 2484 chrX 20940719 20940741 chrX 20942187 20942189 hobo 8 1476 6.5 1.0 3.8 1.7 1470 chrX 20940719 intergenic not near genes chrX 20941454 intergenic not near genes chrX 20942189 intergenic not near genes chrX_8_20940001 chrX_20940001 RAL-894 2485 chrX 20948249 20948284 chrX 20948358 20948393 7 105 0.0 6.0 3.0 1.8 144 chrX 20948249 intergenic not near genes chrX 20948321 intergenic not near genes chrX 20948393 intergenic not near genes chrX_7_20945001 chrX_20945001 RAL-894 2486 chrX 21061871 21061892 chrX 21062376 21062397 roo 4 502 3.0 3.5 3.2 1.0 526 chrX 21061871 intron bves + chrX 21062134 intron bves + chrX 21062397 intron,3` UTR bves +,CG32512 - chrX_4_21060001 chrX_21060001 RAL-894 2487 chrX 21084542 21084554 chrX 21085067 21085089 5 530 8.5 4.0 6.2 0.7 547 chrX 21084542 intergenic not near genes chrX 21084816 intergenic not near genes chrX 21085089 intergenic not near genes chrX_5_21080001 chrX_21080001 RAL-894 2488 chrX 21086118 21086164 chrX 21087167 21087203 jockey 9 1048 1.5 5.5 3.5 2.0 1085 chrX 21086118 intergenic not near genes chrX 21086660 intergenic not near genes chrX 21087203 intergenic not near genes chrX_9_21085001 chrX_21085001 RAL-894 2489 chrX 21088023 21088075 chrX 21088174 21088227 6 148 3.5 2.0 2.8 1.6 204 chrX 21088023 intergenic not near genes chrX 21088125 intergenic not near genes chrX 21088227 intergenic not near genes chrX_6_21085001 chrX_21085001 RAL-894 2490 chrX 21136622 21136654 chrX 21136732 21136764 8 108 2.5 5.0 3.8 1.7 142 chrX 21136622 exon CG34120 + chrX 21136693 intron CG34120 + chrX 21136764 intron CG34120 + chrX_8_21135001 chrX_21135001 RAL-894 2491 chrX 21166135 21166164 chrX 21166220 21166260 6 95 2.5 2.5 2.5 1.7 125 chrX 21166135 intergenic not near genes chrX 21166198 intergenic not near genes chrX 21166260 intergenic not near genes chrX_6_21165001 chrX_21165001 RAL-894 2492 chrX 21264709 21264751 chrX 21264805 21264818 9 89 3.0 2.5 2.8 2.4 109 chrX 21264709 intron CG32521 - chrX 21264764 intron CG32521 - chrX 21264818 intron CG32521 - chrX_9_21260001 chrX_21260001 RAL-894 2493 chrX 21275141 21275188 chrX 21275234 21275281 11 96 3.0 2.5 2.8 2.9 140 chrX 21275141 intron CG32521 - chrX 21275211 intron CG32521 - chrX 21275281 intron CG32521 - chrX_11_21275001 chrX_21275001 RAL-894 2494 chrX 21308874 21308925 chrX 21308977 21309043 11 116 1.0 0.0 0.5 7.3 169 chrX 21308874 exon CG1801 - chrX 21308958 intron CG1801 - chrX 21309043 intron CG1801 - chrX_11_21305001 chrX_21305001 RAL-894 2495 chrX 21311644 21311654 chrX 21311765 21311775 6 120 3.0 0.5 1.8 2.1 131 chrX 21311644 intron CG1801 - chrX 21311710 intron CG1801 - chrX 21311775 intron CG1801 - chrX_6_21310001 chrX_21310001 RAL-894 2496 chrX 21311667 21311676 chrX 21311763 21311797 6 114 3.0 0.5 1.8 2.1 130 chrX 21311667 intron CG1801 - chrX 21311732 intron CG1801 - chrX 21311797 intron CG1801 - chrX_6_21310001 chrX_21310001 RAL-894 2497 chrX 21328101 21328148 chrX 21328232 21328274 11 130 3.5 0.5 2.0 3.7 173 chrX 21328101 3` UTR CG1486 + chrX 21328188 intergenic CG1486 +,tty - chrX 21328274 intergenic CG1486 +,tty - chrX_11_21325001 chrX_21325001 RAL-894 2498 chrX 21358066 21358092 chrX 21358156 21358191 7 98 3.0 1.5 2.2 2.2 125 chrX 21358066 intergenic sol +,Sep1 + chrX 21358128 intergenic Sep1 +,sol + chrX 21358191 intergenic Sep1 +,sol + chrX_7_21355001 chrX_21355001 RAL-894 2499 chrX 21455199 21455239 chrX 21455397 21455444 9 203 3.0 0.0 1.5 3.6 245 chrX 21455199 intron CG42343 - chrX 21455322 intron CG42343 - chrX 21455444 intron CG42343 - chrX_9_21455001 chrX_21455001 RAL-894 2500 chrX 21458681 21458710 chrX 21464137 21464166 Ivk 4 5456 4.5 5.0 4.8 0.7 5485 chrX 21458681 intergenic not near genes chrX 21461424 intergenic not near genes chrX 21464166 intergenic not near genes chrX_4_21460001 chrX_21460001 RAL-894 2501 chrX 21466994 21467044 chrX 21467098 21467148 7 104 3.0 1.0 2.0 2.3 154 chrX 21466994 intergenic CR45507 - chrX 21467071 intergenic CR45507 - chrX 21467148 3` UTR CR45507 - chrX_7_21465001 chrX_21465001 RAL-894 2502 chrX 21474428 21474435 chrX 21474814 21474821 1731 4 386 1.0 5.5 3.2 1.0 393 chrX 21474428 intergenic not near genes chrX 21474624 intergenic not near genes chrX 21474821 intergenic not near genes chrX_4_21470001 chrX_21470001 RAL-894 2503 chrX 21509989 21510006 chrX 21510098 21510115 10 107 0.0 4.5 2.2 3.1 126 chrX 21509989 intron CR45082 - chrX 21510052 intron CR45082 - chrX 21510115 intron CR45082 - chrX_10_21510001 chrX_21510001 RAL-894 2504 chrX 21565399 21565438 chrX 21565491 21565536 6 97 2.0 1.0 1.5 2.4 137 chrX 21565399 intergenic not near genes chrX 21565468 intergenic not near genes chrX 21565536 intergenic not near genes chrX_6_21565001 chrX_21565001 RAL-894 2505 chrX 21624898 21624938 chrX 21625008 21625042 8 103 3.5 1.0 2.2 2.5 144 chrX 21624898 3` UTR DIP1 - chrX 21624970 3` UTR DIP1 - chrX 21625042 3` UTR DIP1 - chrX_8_21620001 chrX_21620001 RAL-894 2506 chrX 21668237 21668285 chrX 21668342 21668390 12 105 21.0 17.0 19.0 0.6 153 chrX 21668237 intergenic not near genes chrX 21668314 intergenic not near genes chrX 21668390 intergenic not near genes chrX_12_21665001 chrX_21665001 RAL-894 2507 chrX 22448250 22448276 chrX 22448409 22448421 4 155 1.5 4.0 2.8 1.1 171 chrX 22448250 intron CG14615 - chrX 22448336 intron CG14615 - chrX 22448421 intron CG14615 - chrX_4_22445001 chrX_22445001 RAL-894 2508 chrX 22478870 22478895 chrX 22479023 22479048 11 152 0.5 2.0 1.2 5.0 178 chrX 22478870 intron CG12576 - chrX 22478959 intron CG12576 - chrX 22479048 intron CG12576 - chrX_11_22475001 chrX_22475001 RAL-894 2509 chrX 22522626 22522636 chrX 22525466 22525476 NOF 4 2840 4.0 2.0 3.0 1.0 2850 chrX 22522626 intron CG17600 + chrX 22524051 intron CG17600 + chrX 22525476 intron CG17600 + chrX_4_22520001 chrX_22520001 RAL-894 2510 chrX 22660554 22660571 chrX 22660654 22660675 5 99 4.0 0.5 2.2 1.6 121 chrX 22660554 intron CR44997 + chrX 22660614 intron CR44997 + chrX 22660675 intron CR44997 + chrX_5_22660001 chrX_22660001 RAL-894 2511 chrX 22660572 22660584 chrX 22660651 22660664 4 81 3.0 0.5 1.8 1.4 92 chrX 22660572 intron CR44997 + chrX 22660618 intron CR44997 + chrX 22660664 intron CR44997 + chrX_4_22660001 chrX_22660001 RAL-894 2512 chrX 22681481 22681511 chrX 22688941 22688978 HMS-Beagle2 7 7470 1.5 4.5 3.0 1.8 7497 chrX 22681481 intron CR44997 + chrX 22685230 intron CR44997 + chrX 22688978 intron CR44997 + chrX_7_22685001 chrX_22685001 RAL-894 2513 chrX 22697479 22697521 chrX 22701796 22701838 Juan 11 4313 4.5 3.5 4.0 2.2 4359 chrX 22697479 intron CR44997 + chrX 22699658 intron CR44997 + chrX 22701838 intron CR44997 + chrX_11_22695001 chrX_22695001 RAL-894 2514 chrX 22734442 22734449 chrX 22734541 22734543 5 98 2.5 1.5 2.0 1.7 101 chrX 22734442 intron CR44997 + chrX 22734492 intron CR44997 + chrX 22734543 intron CR44997 + chrX_5_22730001 chrX_22730001 RAL-894 2515 chrX 22824232 22824441 chrX 22824376 22824594 8 147 2.0 2.0 2.0 2.7 362 chrX 22824232 intergenic fog - chrX 22824413 3` UTR fog - chrX 22824594 3` UTR fog - chrX_8_22820001 chrX_22820001 RAL-894 2516 chrX 22895710 22895756 chrX 22895843 22895874 8 116 1.0 2.0 1.5 3.2 164 chrX 22895710 intergenic not near genes chrX 22895792 intergenic not near genes chrX 22895874 intergenic not near genes chrX_8_22895001 chrX_22895001 RAL-894 2517 chrX 22960786 22960799 chrX 22961008 22961021 6 222 0.0 3.5 1.8 2.1 235 chrX 22960786 3` UTR CG40485 - chrX 22960904 3` UTR CG40485 - chrX 22961021 3` UTR CG40485 - chrX_6_22960001 chrX_22960001 RAL-894 2518 chrX 22982830 22982854 chrX 22983022 22983050 6 200 3.5 3.5 3.5 1.3 220 chrX 22982830 3` UTR,exon stnA -,stnB - chrX 22982940 intron,intron stnA -,stnB - chrX 22983050 intron,intron stnA -,stnB - chrX_6_22980001 chrX_22980001 RAL-894 2519 chrX 22996303 22996339 chrX 23003545 23003556 roo 11 7249 3.0 5.0 4.0 2.2 7253 chrX 22996303 intron,intron stnA -,stnB - chrX 22999930 intron,intron stnA -,stnB - chrX 23003556 intron,intron stnA -,stnB - chrX_11_22995001 chrX_22995001 RAL-894 2520 chrY 104702 104709 chrY 104822 104835 4 124 2.5 4.0 3.2 1.0 133 chrY 104702 intron kl-5 - chrY 104768 intron kl-5 - chrY 104835 intron kl-5 - chrY_4_100001 chrY_100001 RAL-894 2521 chrY 1419902 1419916 chrY 1420163 1420190 7 269 8.0 6.5 7.2 0.9 288 chrY 1419902 intergenic not near genes chrY 1420046 intergenic not near genes chrY 1420190 intergenic not near genes chrY_7_1420001 chrY_1420001 RAL-894 2522 chrY 1420646 1420650 chrY 1420742 1420746 4 96 3.5 7.5 5.5 0.6 100 chrY 1420646 intergenic not near genes chrY 1420696 intergenic not near genes chrY 1420746 intergenic not near genes chrY_4_1420001 chrY_1420001 RAL-894