SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 8112 8155 chr2L 9235 9280 19 1125 24.0 44.0 34.0 0.5 1168 chr2L 8112 exon CG11023 + chr2L 8696 3` UTR CG11023 + chr2L 9280 3` UTR CG11023 + chr2L_19_5001 chr2L_5001 RAL-892 2 chr2L 25313 25358 chr2L 26000 26044 12 686 27.5 27.0 27.2 0.4 731 chr2L 25313 intergenic Cda5 -,Ir21a - chr2L 25678 3` UTR Cda5 - chr2L 26044 3` UTR Cda5 - chr2L_12_25001 chr2L_25001 RAL-892 3 chr2L 47444 47487 chr2L 52569 52612 jockey 17 5123 7.5 9.0 8.2 1.8 5168 chr2L 47444 intron Cda5 - chr2L 50028 intron Cda5 - chr2L 52612 intron Cda5 - chr2L_17_50001 chr2L_50001 RAL-892 4 chr2L 63025 63068 chr2L 63130 63172 14 104 8.5 3.0 5.8 2.1 147 chr2L 63025 intron Cda5 - chr2L 63098 intron Cda5 - chr2L 63172 intron Cda5 - chr2L_14_60001 chr2L_60001 RAL-892 5 chr2L 73772 73814 chr2L 73901 73943 10 129 4.5 3.0 3.8 2.1 171 chr2L 73772 3` UTR,intron CR44987 -,galectin + chr2L 73858 intron galectin + chr2L 73943 intron galectin + chr2L_10_70001 chr2L_70001 RAL-892 6 chr2L 92546 92592 chr2L 92799 92845 23 251 8.0 7.0 7.5 2.7 299 chr2L 92546 intergenic not near genes chr2L 92696 intergenic not near genes chr2L 92845 intergenic not near genes chr2L_23_90001 chr2L_90001 RAL-892 7 chr2L 140734 140781 chr2L 141094 141112 10 358 3.0 7.5 5.2 1.6 378 chr2L 140734 intron,exon,5` UTR CG11455 +,CG31975 -,CG31976 - chr2L 140923 intron,exon,5` UTR CG11455 +,CG31975 -,CG31976 - chr2L 141112 intron,3` UTR CG11455 +,CG31974 - chr2L_10_140001 chr2L_140001 RAL-892 8 chr2L 142483 142489 chr2L 142595 142601 4 112 11.0 7.0 9.0 0.4 118 chr2L 142483 intron,exon CG11455 +,CG31974 - chr2L 142542 intron,5` UTR CG11455 +,CG31974 - chr2L 142601 intron,5` UTR CG11455 +,CG31974 - chr2L_4_140001 chr2L_140001 RAL-892 9 chr2L 142494 142524 chr2L 142587 142637 15 110 2.5 6.0 4.2 2.9 143 chr2L 142494 intron,5` UTR CG11455 +,CG31974 - chr2L 142566 intron,5` UTR CG11455 +,CG31974 - chr2L 142637 intron,5` UTR CG11455 +,CG31974 - chr2L_15_140001 chr2L_140001 RAL-892 10 chr2L 165191 165234 chr2L 165475 165518 8 282 5.0 3.0 4.0 1.6 327 chr2L 165191 intron spen + chr2L 165354 intron spen + chr2L 165518 intron spen + chr2L_8_165001 chr2L_165001 RAL-892 11 chr2L 179441 179488 chr2L 179544 179591 14 99 4.0 2.5 3.2 3.3 150 chr2L 179441 intron spen + chr2L 179516 intron spen + chr2L 179591 intron spen + chr2L_14_175001 chr2L_175001 RAL-892 12 chr2L 263284 263319 chr2L 263450 263485 8 166 1.0 3.0 2.0 2.7 201 chr2L 263284 intron,3` UTR CG3645 -,CG17075 - chr2L 263384 intron,3` UTR CG3645 -,CG17075 - chr2L 263485 intron,3` UTR CG3645 -,CG17075 - chr2L_8_260001 chr2L_260001 RAL-892 13 chr2L 316694 316733 chr2L 316790 316829 11 94 4.5 4.0 4.2 2.1 135 chr2L 316694 intron Plc21C + chr2L 316762 intron Plc21C + chr2L 316829 intron Plc21C + chr2L_11_315001 chr2L_315001 RAL-892 14 chr2L 347866 347918 chr2L 355386 355438 blood 14 7518 4.5 5.5 5.0 2.3 7572 chr2L 347866 3` UTR Plc21C + chr2L 351652 intron Plc21C + chr2L 355438 3` UTR Plc21C + chr2L_14_350001 chr2L_350001 RAL-892 15 chr2L 371425 371448 chr2L 371524 371547 5 99 4.0 6.0 5.0 0.8 122 chr2L 371425 intergenic not near genes chr2L 371486 intergenic not near genes chr2L 371547 intergenic not near genes chr2L_5_370001 chr2L_370001 RAL-892 16 chr2L 575404 575444 chr2L 575520 575560 16 116 3.5 0.5 2.0 5.3 156 chr2L 575404 3` UTR cold + chr2L 575482 3` UTR cold + chr2L 575560 3` UTR cold + chr2L_16_575001 chr2L_575001 RAL-892 17 chr2L 585516 585546 chr2L 585613 585644 4 95 5.0 4.5 4.8 0.7 128 chr2L 585516 intron Gsc - chr2L 585580 intron Gsc - chr2L 585644 intron Gsc - chr2L_4_585001 chr2L_585001 RAL-892 18 chr2L 612642 612647 chr2L 612722 612724 4 90 1.5 1.5 1.5 1.6 82 chr2L 612642 intergenic not near genes chr2L 612683 intergenic not near genes chr2L 612724 intergenic not near genes chr2L_4_610001 chr2L_610001 RAL-892 19 chr2L 658542 658571 chr2L 658640 658655 5 96 5.0 1.5 3.2 1.2 113 chr2L 658542 intron ds - chr2L 658598 intron ds - chr2L 658655 intron ds - chr2L_5_655001 chr2L_655001 RAL-892 20 chr2L 686922 686949 chr2L 695956 696009 roo 9 9053 3.0 5.0 4.0 1.8 9087 chr2L 686922 intron ds - chr2L 691466 intron ds - chr2L 696009 intron ds - chr2L_9_690001 chr2L_690001 RAL-892 21 chr2L 770453 770484 chr2L 772246 772285 Bari1 6 1794 2.5 4.5 3.5 1.3 1832 chr2L 770453 intergenic not near genes chr2L 771369 intergenic not near genes chr2L 772285 intergenic CR44614 + chr2L_6_770001 chr2L_770001 RAL-892 22 chr2L 795257 795293 chr2L 795375 795433 7 126 2.0 0.0 1.0 3.5 176 chr2L 795257 intergenic not near genes chr2L 795345 intergenic not near genes chr2L 795433 intergenic not near genes chr2L_7_795001 chr2L_795001 RAL-892 23 chr2L 809554 809592 chr2L 809645 809663 12 98 3.5 0.0 1.8 4.3 109 chr2L 809554 intergenic not near genes chr2L 809608 intergenic not near genes chr2L 809663 intergenic not near genes chr2L_12_805001 chr2L_805001 RAL-892 24 chr2L 849464 849486 chr2L 849566 849597 8 105 5.0 5.5 5.2 1.3 133 chr2L 849464 intron drongo - chr2L 849530 intron drongo - chr2L 849597 intron drongo - chr2L_8_845001 chr2L_845001 RAL-892 25 chr2L 931622 931669 chr2L 931716 931767 14 97 4.0 4.5 4.2 2.7 145 chr2L 931622 intron CG4341 + chr2L 931694 intron CG4341 + chr2L 931767 intron CG4341 + chr2L_14_930001 chr2L_930001 RAL-892 26 chr2L 976860 976911 chr2L 984516 984567 roo 18 7655 6.5 5.0 5.8 2.6 7707 chr2L 976860 intergenic not near genes chr2L 980714 intergenic not near genes chr2L 984567 intergenic not near genes chr2L_18_980001 chr2L_980001 RAL-892 27 chr2L 996707 996749 chr2L 1005822 1005864 roo 16 9115 7.5 4.5 6.0 2.3 9157 chr2L 996707 intergenic not near genes chr2L 1001286 intergenic not near genes chr2L 1005864 intergenic not near genes chr2L_16_1000001 chr2L_1000001 RAL-892 28 chr2L 1035544 1035580 chr2L 1035641 1035677 13 97 6.0 6.0 6.0 1.9 133 chr2L 1035544 intron IA-2 - chr2L 1035610 intron IA-2 - chr2L 1035677 intron IA-2 - chr2L_13_1035001 chr2L_1035001 RAL-892 29 chr2L 1156839 1156891 chr2L 1156964 1157016 13 120 4.0 2.0 3.0 3.2 177 chr2L 1156839 intron capt - chr2L 1156928 intron capt - chr2L 1157016 intron capt - chr2L_13_1155001 chr2L_1155001 RAL-892 30 chr2L 1220108 1220153 chr2L 1227593 1227639 blood 9 7483 4.5 3.0 3.8 1.9 7531 chr2L 1220108 intron CG42329 + chr2L 1223874 intron CG42329 + chr2L 1227639 intron CG42329 + chr2L_9_1220001 chr2L_1220001 RAL-892 31 chr2L 1261214 1261250 chr2L 1261315 1261331 6 98 5.5 2.0 3.8 1.2 117 chr2L 1261214 intron robo3 + chr2L 1261272 intron robo3 + chr2L 1261331 intron robo3 + chr2L_6_1260001 chr2L_1260001 RAL-892 32 chr2L 1301748 1301781 chr2L 1302305 1302358 gypsy 4 571 0.5 0.0 0.2 3.3 610 chr2L 1301748 intergenic not near genes chr2L 1302053 intergenic not near genes chr2L 1302358 intergenic not near genes chr2L_4_1300001 chr2L_1300001 RAL-892 33 chr2L 1541619 1541652 chr2L 1541733 1541781 6 126 5.0 1.5 3.2 1.4 162 chr2L 1541619 intergenic not near genes chr2L 1541700 intergenic not near genes chr2L 1541781 intergenic not near genes chr2L_6_1540001 chr2L_1540001 RAL-892 34 chr2L 1570675 1570717 chr2L 1573567 1573609 F-element 12 2892 6.5 2.0 4.2 2.3 2934 chr2L 1570675 intron haf + chr2L 1572142 intron haf + chr2L 1573609 intron haf + chr2L_12_1570001 chr2L_1570001 RAL-892 35 chr2L 1591862 1591895 chr2L 1591966 1591997 12 104 2.0 3.5 2.8 3.2 135 chr2L 1591862 intron haf + chr2L 1591930 intron haf + chr2L 1591997 intron haf + chr2L_12_1590001 chr2L_1590001 RAL-892 36 chr2L 1678941 1679004 chr2L 1686444 1686489 blood 11 7494 0.5 4.5 2.5 3.1 7548 chr2L 1678941 intron chinmo + chr2L 1682715 intron chinmo + chr2L 1686489 intron chinmo + chr2L_11_1680001 chr2L_1680001 RAL-892 37 chr2L 1711338 1711381 chr2L 1711682 1711725 mdg3 4 344 3.5 3.0 3.2 1.0 387 chr2L 1711338 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711532 3` UTR frtz - chr2L 1711725 3` UTR frtz - chr2L_4_1710001 chr2L_1710001 RAL-892 38 chr2L 1744791 1744832 chr2L 1744888 1744930 14 95 3.5 3.0 3.2 3.3 139 chr2L 1744791 intron CG17646 + chr2L 1744860 intron CG17646 + chr2L 1744930 exon CG17646 + chr2L_14_1740001 chr2L_1740001 RAL-892 39 chr2L 1781102 1781126 chr2L 1781274 1781298 8 169 25.0 18.0 21.5 0.4 196 chr2L 1781102 intergenic not near genes chr2L 1781200 intergenic not near genes chr2L 1781298 intergenic not near genes chr2L_8_1780001 chr2L_1780001 RAL-892 40 chr2L 1836779 1836811 chr2L 1836907 1836939 5 128 3.0 0.0 1.5 2.0 160 chr2L 1836779 intron wry + chr2L 1836859 intron wry + chr2L 1836939 intron wry + chr2L_5_1835001 chr2L_1835001 RAL-892 41 chr2L 1868204 1868255 chr2L 1868430 1868473 6 218 3.0 4.0 3.5 1.3 269 chr2L 1868204 intron CG31663 - chr2L 1868338 intron CG31663 - chr2L 1868473 intron CG31663 - chr2L_6_1865001 chr2L_1865001 RAL-892 42 chr2L 1883396 1883416 chr2L 1883999 1884019 4 602 7.5 2.5 5.0 0.7 623 chr2L 1883396 intron CG15358 - chr2L 1883708 intron CG15358 - chr2L 1884019 exon CG15358 - chr2L_4_1880001 chr2L_1880001 RAL-892 43 chr2L 1948615 1948630 chr2L 1948742 1948757 4 127 0.0 3.0 1.5 1.6 142 chr2L 1948615 intergenic not near genes chr2L 1948686 intergenic not near genes chr2L 1948757 intergenic not near genes chr2L_4_1945001 chr2L_1945001 RAL-892 44 chr2L 1993203 1993217 chr2L 1993299 1993323 7 102 4.0 8.0 6.0 1.0 120 chr2L 1993203 intergenic not near genes chr2L 1993263 intergenic not near genes chr2L 1993323 intergenic not near genes chr2L_7_1990001 chr2L_1990001 RAL-892 45 chr2L 1999538 1999580 chr2L 1999722 1999743 4 170 4.0 3.0 3.5 0.9 205 chr2L 1999538 intron CG33543 - chr2L 1999640 intron CG33543 - chr2L 1999743 intron CG33543 - chr2L_4_1995001 chr2L_1995001 RAL-892 46 chr2L 2007848 2007856 chr2L 2007976 2007984 4 128 5.0 7.0 6.0 0.6 136 chr2L 2007848 intergenic CR45712 + chr2L 2007916 intergenic CR45712 +,Nplp4 + chr2L 2007984 intergenic CR45712 +,Nplp4 + chr2L_4_2005001 chr2L_2005001 RAL-892 47 chr2L 2068804 2068840 chr2L 2068999 2069041 7 196 1.0 0.5 0.8 3.9 237 chr2L 2068804 intron dpr3 - chr2L 2068922 intron dpr3 - chr2L 2069041 intron dpr3 - chr2L_7_2065001 chr2L_2065001 RAL-892 48 chr2L 2100376 2100382 chr2L 2109547 2109547 roo 5 9170 6.5 3.0 4.8 0.9 9171 chr2L 2100376 intron dpr3 - chr2L 2104962 intron dpr3 - chr2L 2109547 intron dpr3 - chr2L_5_2100001 chr2L_2100001 RAL-892 49 chr2L 2100383 2100397 chr2L 2109523 2109568 roo 7 9162 5.5 2.5 4.0 1.4 9185 chr2L 2100383 intron dpr3 - chr2L 2104976 intron dpr3 - chr2L 2109568 intron dpr3 - chr2L_7_2100001 chr2L_2100001 RAL-892 50 chr2L 2160600 2160621 chr2L 2160710 2160731 7 110 5.0 3.0 4.0 1.4 131 chr2L 2160600 intron aop - chr2L 2160666 intron aop - chr2L 2160731 intron aop - chr2L_7_2160001 chr2L_2160001 RAL-892 51 chr2L 2256460 2256468 chr2L 2256559 2256568 6 100 1.0 6.0 3.5 1.3 108 chr2L 2256460 intergenic not near genes chr2L 2256514 intergenic not near genes chr2L 2256568 intergenic not near genes chr2L_6_2255001 chr2L_2255001 RAL-892 52 chr2L 2260791 2260828 chr2L 2260897 2260921 15 103 2.5 1.5 2.0 5.0 130 chr2L 2260791 intergenic not near genes chr2L 2260856 intergenic not near genes chr2L 2260921 intergenic not near genes chr2L_15_2260001 chr2L_2260001 RAL-892 53 chr2L 2262293 2262321 chr2L 2262390 2262410 11 94 5.5 0.0 2.8 2.9 117 chr2L 2262293 intergenic not near genes chr2L 2262352 intergenic not near genes chr2L 2262410 intergenic not near genes chr2L_11_2260001 chr2L_2260001 RAL-892 54 chr2L 2364073 2364101 chr2L 2364169 2364195 9 95 4.0 7.0 5.5 1.4 122 chr2L 2364073 intron Rab5 - chr2L 2364134 intron Rab5 - chr2L 2364195 intron Rab5 - chr2L_9_2360001 chr2L_2360001 RAL-892 55 chr2L 2372345 2372402 chr2L 2372451 2372502 6 103 0.0 2.5 1.2 2.7 157 chr2L 2372345 intergenic CG3609 - chr2L 2372424 intergenic CG3609 - chr2L 2372502 3` UTR CG3609 - chr2L_6_2370001 chr2L_2370001 RAL-892 56 chr2L 2398943 2398950 chr2L 2399009 2399048 4 90 0.0 2.5 1.2 1.8 105 chr2L 2398943 intron VGlut + chr2L 2398996 intron VGlut + chr2L 2399048 intron VGlut + chr2L_4_2395001 chr2L_2395001 RAL-892 57 chr2L 2398953 2398958 chr2L 2399007 2399054 4 82 0.0 2.5 1.2 1.8 101 chr2L 2398953 intron VGlut + chr2L 2399004 intron VGlut + chr2L 2399054 intron VGlut + chr2L_4_2395001 chr2L_2395001 RAL-892 58 chr2L 2412155 2412205 chr2L 2412284 2412324 10 122 2.5 3.5 3.0 2.5 169 chr2L 2412155 intron CG18641 - chr2L 2412240 intron CG18641 - chr2L 2412324 intron CG18641 - chr2L_10_2410001 chr2L_2410001 RAL-892 59 chr2L 2557201 2557212 chr2L 2557286 2557308 4 93 4.0 6.0 5.0 0.7 107 chr2L 2557201 intergenic not near genes chr2L 2557254 intergenic not near genes chr2L 2557308 intergenic not near genes chr2L_4_2555001 chr2L_2555001 RAL-892 60 chr2L 2565535 2565560 chr2L 2571627 2571653 297 12 6093 3.0 7.0 5.0 2.0 6118 chr2L 2565535 exon Cyp309a2 - chr2L 2568594 intron Cyp309a2 - chr2L 2571653 exon Cyp309a2 - chr2L_12_2565001 chr2L_2565001 RAL-892 61 chr2L 2595267 2595276 chr2L 2595373 2595387 4 110 3.5 4.5 4.0 0.8 120 chr2L 2595267 intergenic not near genes chr2L 2595327 intergenic not near genes chr2L 2595387 intergenic not near genes chr2L_4_2595001 chr2L_2595001 RAL-892 62 chr2L 2626312 2626351 chr2L 2626841 2626849 8 522 0.5 6.5 3.5 1.8 537 chr2L 2626312 3` UTR CR45705 - chr2L 2626580 3` UTR CR45705 - chr2L 2626849 3` UTR CR45705 - chr2L_8_2625001 chr2L_2625001 RAL-892 63 chr2L 2667608 2667635 chr2L 2667705 2667734 6 97 7.0 2.5 4.8 1.0 126 chr2L 2667608 intergenic not near genes chr2L 2667671 intergenic not near genes chr2L 2667734 intergenic not near genes chr2L_6_2665001 chr2L_2665001 RAL-892 64 chr2L 2667646 2667657 chr2L 2667703 2667744 4 75 4.5 3.0 3.8 0.8 98 chr2L 2667646 intergenic not near genes chr2L 2667695 intergenic not near genes chr2L 2667744 intergenic not near genes chr2L_4_2665001 chr2L_2665001 RAL-892 65 chr2L 2683855 2683906 chr2L 2683952 2683994 11 95 0.5 4.5 2.5 3.1 139 chr2L 2683855 intron CG31690 + chr2L 2683924 5` UTR CG31690 + chr2L 2683994 5` UTR CG31690 + chr2L_11_2680001 chr2L_2680001 RAL-892 66 chr2L 2715670 2715699 chr2L 2715765 2715795 12 95 3.5 4.5 4.0 2.4 125 chr2L 2715670 intron CG31690 + chr2L 2715732 intron CG31690 + chr2L 2715795 intron CG31690 + chr2L_12_2715001 chr2L_2715001 RAL-892 67 chr2L 2772593 2772617 chr2L 2779195 2779219 297 6 6600 2.5 8.5 5.5 0.9 6626 chr2L 2772593 3` UTR Syt1 - chr2L 2775906 intron Syt1 - chr2L 2779219 3` UTR Syt1 - chr2L_6_2775001 chr2L_2775001 RAL-892 68 chr2L 2804217 2804272 chr2L 2804326 2804361 14 102 6.0 3.5 4.8 2.4 144 chr2L 2804217 intergenic not near genes chr2L 2804289 intergenic not near genes chr2L 2804361 intergenic not near genes chr2L_14_2800001 chr2L_2800001 RAL-892 69 chr2L 2826522 2826574 chr2L 2826631 2826679 6 107 1.0 5.0 3.0 1.5 157 chr2L 2826522 intron Duox - chr2L 2826600 intron Duox - chr2L 2826679 intron Duox - chr2L_6_2825001 chr2L_2825001 RAL-892 70 chr2L 2895676 2895717 chr2L 2895772 2895823 13 105 7.0 1.5 4.2 2.5 147 chr2L 2895676 intron lilli + chr2L 2895750 intron lilli + chr2L 2895823 intron lilli + chr2L_13_2895001 chr2L_2895001 RAL-892 71 chr2L 2933313 2933330 chr2L 2935479 2935522 pogo 7 2188 4.0 2.5 3.2 1.7 2209 chr2L 2933313 intron lilli + chr2L 2934418 intron lilli + chr2L 2935522 intron lilli + chr2L_7_2930001 chr2L_2930001 RAL-892 72 chr2L 2937396 2937450 chr2L 2937494 2937546 13 96 3.0 3.0 3.0 3.2 150 chr2L 2937396 intron lilli + chr2L 2937471 intron lilli + chr2L 2937546 intron lilli + chr2L_13_2935001 chr2L_2935001 RAL-892 73 chr2L 3073014 3073057 chr2L 3078237 3078280 copia 13 5223 4.0 3.5 3.8 2.7 5266 chr2L 3073014 intron toc - chr2L 3075647 intron toc - chr2L 3078280 intron toc - chr2L_13_3075001 chr2L_3075001 RAL-892 74 chr2L 3093943 3093989 chr2L 3094040 3094086 19 97 5.0 5.0 5.0 3.2 143 chr2L 3093943 intron toc - chr2L 3094014 intron toc - chr2L 3094086 intron toc - chr2L_19_3090001 chr2L_3090001 RAL-892 75 chr2L 3121970 3122000 chr2L 3122075 3122106 9 106 2.5 6.5 4.5 1.6 136 chr2L 3121970 intron toc - chr2L 3122038 intron toc - chr2L 3122106 intron toc - chr2L_9_3120001 chr2L_3120001 RAL-892 76 chr2L 3134281 3134293 chr2L 3134377 3134389 4 96 3.0 10.5 6.8 0.5 108 chr2L 3134281 intron toc - chr2L 3134335 intron toc - chr2L 3134389 intron toc - chr2L_4_3130001 chr2L_3130001 RAL-892 77 chr2L 3229074 3229098 chr2L 3229423 3229449 4 350 0.0 8.0 4.0 0.8 375 chr2L 3229074 intergenic not near genes chr2L 3229262 intergenic not near genes chr2L 3229449 intergenic not near genes chr2L_4_3225001 chr2L_3225001 RAL-892 78 chr2L 3251483 3251525 chr2L 3259059 3259109 springer 8 7583 0.0 3.0 1.5 3.2 7626 chr2L 3251483 intergenic not near genes chr2L 3255296 intergenic not near genes chr2L 3259109 intergenic not near genes chr2L_8_3255001 chr2L_3255001 RAL-892 79 chr2L 3312079 3312114 chr2L 3312193 3312239 13 122 0.0 2.5 1.2 5.9 160 chr2L 3312079 intron CG3277 + chr2L 3312159 intron CG3277 + chr2L 3312239 intron CG3277 + chr2L_13_3310001 chr2L_3310001 RAL-892 80 chr2L 3388581 3388631 chr2L 3388842 3388892 pogo 17 261 3.0 4.0 3.5 3.8 311 chr2L 3388581 intergenic CG42460 - chr2L 3388736 intergenic CG42460 - chr2L 3388892 intergenic CG42460 -,CR44791 + chr2L_17_3385001 chr2L_3385001 RAL-892 81 chr2L 3508422 3508449 chr2L 3508518 3508545 8 96 5.0 12.5 8.8 0.8 123 chr2L 3508422 intergenic CR45299 +,tim - chr2L 3508484 intergenic CR45299 +,tim - chr2L 3508545 intergenic CR45299 +,tim - chr2L_8_3505001 chr2L_3505001 RAL-892 82 chr2L 3523024 3523053 chr2L 3523147 3523167 11 127 1.5 6.5 4.0 2.2 143 chr2L 3523024 exon Sr-CIV - chr2L 3523096 intron Sr-CIV - chr2L 3523167 exon Sr-CIV - chr2L_11_3520001 chr2L_3520001 RAL-892 83 chr2L 3582882 3582901 chr2L 3582977 3582992 10 96 1.5 8.5 5.0 1.7 110 chr2L 3582882 intergenic not near genes chr2L 3582937 intergenic not near genes chr2L 3582992 intergenic not near genes chr2L_10_3580001 chr2L_3580001 RAL-892 84 chr2L 3649786 3649789 chr2L 3654996 3655011 copia 4 5216 0.0 7.0 3.5 0.9 5225 chr2L 3649786 intron for - chr2L 3652398 intron for - chr2L 3655011 intron for - chr2L_4_3650001 chr2L_3650001 RAL-892 85 chr2L 3649792 3649805 chr2L 3654993 3655027 copia 4 5217 0.0 6.5 3.2 1.0 5235 chr2L 3649792 intron for - chr2L 3652410 intron for - chr2L 3655027 intron for - chr2L_4_3650001 chr2L_3650001 RAL-892 86 chr2L 3663289 3663332 chr2L 3663388 3663431 9 97 3.5 4.5 4.0 1.8 142 chr2L 3663289 5` UTR CG34340 + chr2L 3663360 intron CG34340 + chr2L 3663431 intron CG34340 + chr2L_9_3660001 chr2L_3660001 RAL-892 87 chr2L 3784787 3784807 chr2L 3785666 3785686 7 878 22.5 25.0 23.8 0.3 899 chr2L 3784787 intergenic CG31960 + chr2L 3785236 exon CG31960 + chr2L 3785686 intergenic CG31958 +,CG31960 + chr2L_7_3785001 chr2L_3785001 RAL-892 88 chr2L 3784710 3784720 chr2L 3785626 3785637 5 917 30.0 24.5 27.2 0.2 927 chr2L 3784710 intergenic CG31960 + chr2L 3785174 exon CG31960 + chr2L 3785637 intergenic CG31960 +,CG31958 + chr2L_5_3785001 chr2L_3785001 RAL-892 89 chr2L 3819018 3819057 chr2L 3819120 3819156 8 100 4.5 0.0 2.2 2.5 138 chr2L 3819018 intergenic CR44077 + chr2L 3819087 intergenic not near genes chr2L 3819156 intergenic not near genes chr2L_8_3815001 chr2L_3815001 RAL-892 90 chr2L 3821055 3821065 chr2L 3821151 3821161 7 96 11.5 0.0 5.8 1.0 106 chr2L 3821055 intergenic not near genes chr2L 3821108 intergenic not near genes chr2L 3821161 intergenic not near genes chr2L_7_3820001 chr2L_3820001 RAL-892 91 chr2L 3831817 3831863 chr2L 3831918 3831964 10 101 3.5 5.0 4.2 1.9 147 chr2L 3831817 intergenic not near genes chr2L 3831890 intergenic not near genes chr2L 3831964 intergenic not near genes chr2L_10_3830001 chr2L_3830001 RAL-892 92 chr2L 3836118 3836157 chr2L 3836499 3836538 12 381 2.5 4.5 3.5 2.7 420 chr2L 3836118 intergenic not near genes chr2L 3836328 intergenic not near genes chr2L 3836538 intergenic slp2 + chr2L_12_3835001 chr2L_3835001 RAL-892 93 chr2L 3844326 3844338 chr2L 3844458 3844470 5 131 9.5 2.0 5.8 0.7 144 chr2L 3844326 intergenic not near genes chr2L 3844398 intergenic not near genes chr2L 3844470 intergenic not near genes chr2L_5_3840001 chr2L_3840001 RAL-892 94 chr2L 3884770 3884803 chr2L 3884867 3884900 15 97 5.5 3.0 4.2 2.9 130 chr2L 3884770 intron capu - chr2L 3884835 intron capu - chr2L 3884900 intron capu - chr2L_15_3880001 chr2L_3880001 RAL-892 95 chr2L 3891873 3891915 chr2L 3891978 3892012 8 102 4.5 3.0 3.8 1.7 139 chr2L 3891873 intron capu - chr2L 3891942 intron capu - chr2L 3892012 intron capu - chr2L_8_3890001 chr2L_3890001 RAL-892 96 chr2L 3896297 3896318 chr2L 3896396 3896412 4 98 4.0 0.0 2.0 1.3 115 chr2L 3896297 intron capu - chr2L 3896354 intron capu - chr2L 3896412 intron capu - chr2L_4_3895001 chr2L_3895001 RAL-892 97 chr2L 3898251 3898308 chr2L 3898356 3898406 8 99 0.5 2.5 1.5 3.2 155 chr2L 3898251 intron capu - chr2L 3898328 intron capu - chr2L 3898406 intron capu - chr2L_8_3895001 chr2L_3895001 RAL-892 98 chr2L 3936610 3936655 chr2L 3936708 3936745 5 95 0.5 0.0 0.2 4.2 135 chr2L 3936610 intron fred - chr2L 3936678 intron fred - chr2L 3936745 intron fred - chr2L_5_3935001 chr2L_3935001 RAL-892 99 chr2L 3943772 3943826 chr2L 3943883 3943936 8 111 0.0 2.5 1.2 3.6 164 chr2L 3943772 intron fred - chr2L 3943854 intron fred - chr2L 3943936 intron fred - chr2L_8_3940001 chr2L_3940001 RAL-892 100 chr2L 4034091 4034134 chr2L 4034461 4034502 10 369 31.0 34.0 32.5 0.3 411 chr2L 4034091 intron ed + chr2L 4034296 intron ed + chr2L 4034502 intron ed + chr2L_10_4030001 chr2L_4030001 RAL-892 101 chr2L 4037786 4037808 chr2L 4037893 4037915 10 107 7.0 4.5 5.8 1.5 129 chr2L 4037786 intron ed + chr2L 4037850 intron ed + chr2L 4037915 intron ed + chr2L_10_4035001 chr2L_4035001 RAL-892 102 chr2L 4060162 4060200 chr2L 4060258 4060296 11 96 1.0 6.5 3.8 2.3 134 chr2L 4060162 intron ed + chr2L 4060229 intron ed + chr2L 4060296 intron ed + chr2L_11_4060001 chr2L_4060001 RAL-892 103 chr2L 4066045 4066057 chr2L 4068878 4068900 Juan 5 2841 3.0 7.5 5.2 0.8 2855 chr2L 4066045 intron ed + chr2L 4067472 intron ed + chr2L 4068900 intron ed + chr2L_5_4065001 chr2L_4065001 RAL-892 104 chr2L 4150638 4150657 chr2L 4150709 4150718 4 69 0.0 4.5 2.2 1.2 80 chr2L 4150638 exon CG2955 + chr2L 4150678 exon CG2955 + chr2L 4150718 exon CG2955 + chr2L_4_4150001 chr2L_4150001 RAL-892 105 chr2L 4160486 4160534 chr2L 4160917 4160953 7 425 2.5 5.0 3.8 1.5 467 chr2L 4160486 intergenic not near genes chr2L 4160720 intergenic not near genes chr2L 4160953 intergenic not near genes chr2L_7_4160001 chr2L_4160001 RAL-892 106 chr2L 4181294 4181298 chr2L 4183946 4183950 Burdock 4 2652 3.5 11.0 7.2 0.5 2656 chr2L 4181294 intergenic not near genes chr2L 4182622 intergenic not near genes chr2L 4183950 intergenic not near genes chr2L_4_4180001 chr2L_4180001 RAL-892 107 chr2L 4184453 4184507 chr2L 4184792 4184846 12 339 0.0 4.0 2.0 4.0 393 chr2L 4184453 intergenic not near genes chr2L 4184650 intergenic not near genes chr2L 4184846 intergenic not near genes chr2L_12_4180001 chr2L_4180001 RAL-892 108 chr2L 4351453 4351501 chr2L 4351549 4351594 14 93 7.5 3.5 5.5 2.2 141 chr2L 4351453 intergenic CR44700 + chr2L 4351524 intergenic CR44700 + chr2L 4351594 intergenic CR44700 + chr2L_14_4350001 chr2L_4350001 RAL-892 109 chr2L 4356616 4356648 chr2L 4356715 4356731 11 96 0.5 3.0 1.8 3.9 115 chr2L 4356616 intergenic not near genes chr2L 4356674 intergenic not near genes chr2L 4356731 intergenic not near genes chr2L_11_4355001 chr2L_4355001 RAL-892 110 chr2L 4437189 4437227 chr2L 4437289 4437316 17 97 3.0 2.5 2.8 4.5 127 chr2L 4437189 intron CG15431 - chr2L 4437252 intron CG15431 - chr2L 4437316 intron CG15431 - chr2L_17_4435001 chr2L_4435001 RAL-892 111 chr2L 4601688 4601737 chr2L 4609149 4609198 mdg1 21 7461 3.0 2.5 2.8 5.5 7510 chr2L 4601688 intron dp - chr2L 4605443 intron dp - chr2L 4609198 intron dp - chr2L_21_4605001 chr2L_4605001 RAL-892 112 chr2L 4672077 4672108 chr2L 4672174 4672205 10 97 0.0 4.0 2.0 3.3 128 chr2L 4672077 intergenic not near genes chr2L 4672141 intergenic not near genes chr2L 4672205 intergenic not near genes chr2L_10_4670001 chr2L_4670001 RAL-892 113 chr2L 4693394 4693417 chr2L 4693581 4693604 8 186 3.0 3.0 3.0 2.0 210 chr2L 4693394 intergenic not near genes chr2L 4693499 intergenic not near genes chr2L 4693604 intergenic not near genes chr2L_8_4690001 chr2L_4690001 RAL-892 114 chr2L 4721150 4721181 chr2L 4721254 4721273 10 103 6.0 6.0 6.0 1.4 123 chr2L 4721150 3` UTR CG34351 + chr2L 4721212 3` UTR CG34351 + chr2L 4721273 3` UTR CG34351 + chr2L_10_4720001 chr2L_4720001 RAL-892 115 chr2L 4781108 4781159 chr2L 4781238 4781274 8 121 4.0 0.0 2.0 2.7 166 chr2L 4781108 intron CG15630 - chr2L 4781191 intron CG15630 - chr2L 4781274 intron CG15630 - chr2L_8_4780001 chr2L_4780001 RAL-892 116 chr2L 4819474 4819519 chr2L 4819617 4819662 8 138 1.0 3.0 2.0 2.7 188 chr2L 4819474 intergenic not near genes chr2L 4819568 intergenic not near genes chr2L 4819662 intergenic not near genes chr2L_8_4815001 chr2L_4815001 RAL-892 117 chr2L 4841050 4841093 chr2L 4841145 4841183 9 91 6.5 5.5 6.0 1.3 133 chr2L 4841050 intron CG12194 + chr2L 4841116 intron CG12194 + chr2L 4841183 exon CG12194 + chr2L_9_4840001 chr2L_4840001 RAL-892 118 chr2L 4918152 4918192 chr2L 4923245 4923282 jockey 15 5092 5.0 8.0 6.5 2.0 5130 chr2L 4918152 intron hoe1 - chr2L 4920717 intron hoe1 - chr2L 4923282 intron hoe1 - chr2L_15_4920001 chr2L_4920001 RAL-892 119 chr2L 5070724 5070775 chr2L 5070822 5070873 8 98 5.0 0.0 2.5 2.3 149 chr2L 5070724 3` UTR qtc + chr2L 5070798 intergenic qtc +,CR45305 -,RpL37A + chr2L 5070873 intergenic CR45305 -,RpL37A +,qtc + chr2L_8_5070001 chr2L_5070001 RAL-892 120 chr2L 5117287 5117322 chr2L 5117382 5117424 11 98 2.0 3.5 2.8 2.9 137 chr2L 5117287 intron Msp300 + chr2L 5117356 intron Msp300 + chr2L 5117424 intron Msp300 + chr2L_11_5115001 chr2L_5115001 RAL-892 121 chr2L 5120963 5121005 chr2L 5121072 5121117 16 113 3.5 2.0 2.8 4.2 154 chr2L 5120963 intron Msp300 + chr2L 5121040 intron Msp300 + chr2L 5121117 intron Msp300 + chr2L_16_5120001 chr2L_5120001 RAL-892 122 chr2L 5240965 5240996 chr2L 5241063 5241091 7 99 0.0 1.5 0.8 3.9 126 chr2L 5240965 intron tkv - chr2L 5241028 intron tkv - chr2L 5241091 intron tkv - chr2L_7_5240001 chr2L_5240001 RAL-892 123 chr2L 5247244 5247280 chr2L 5247826 5247837 8 578 6.5 2.5 4.5 1.5 593 chr2L 5247244 intron tkv - chr2L 5247540 intron tkv - chr2L 5247837 intron tkv - chr2L_8_5245001 chr2L_5245001 RAL-892 124 chr2L 5295072 5295094 chr2L 5295205 5295224 4 128 7.5 2.5 5.0 0.7 152 chr2L 5295072 intron vri + chr2L 5295148 intron vri + chr2L 5295224 intron vri + chr2L_4_5295001 chr2L_5295001 RAL-892 125 chr2L 5295097 5295121 chr2L 5295203 5295233 7 111 4.0 2.5 3.2 1.7 136 chr2L 5295097 intron vri + chr2L 5295165 intron vri + chr2L 5295233 intron vri + chr2L_7_5295001 chr2L_5295001 RAL-892 126 chr2L 5375415 5375438 chr2L 5375563 5375602 11 158 1.0 2.0 1.5 4.4 187 chr2L 5375415 intergenic not near genes chr2L 5375508 intergenic not near genes chr2L 5375602 intergenic not near genes chr2L_11_5375001 chr2L_5375001 RAL-892 127 chr2L 5401604 5401613 chr2L 5401700 5401709 7 96 3.0 0.0 1.5 2.8 105 chr2L 5401604 intergenic not near genes chr2L 5401656 intergenic not near genes chr2L 5401709 intergenic not near genes chr2L_7_5400001 chr2L_5400001 RAL-892 128 chr2L 5403117 5403167 chr2L 5403230 5403280 5 113 4.5 0.0 2.2 1.6 163 chr2L 5403117 intergenic not near genes chr2L 5403198 intergenic not near genes chr2L 5403280 intergenic not near genes chr2L_5_5400001 chr2L_5400001 RAL-892 129 chr2L 5508520 5508563 chr2L 5508616 5508643 15 94 3.0 5.5 4.2 2.9 123 chr2L 5508520 intergenic not near genes chr2L 5508582 intergenic not near genes chr2L 5508643 intergenic not near genes chr2L_15_5505001 chr2L_5505001 RAL-892 130 chr2L 5516642 5516687 chr2L 5516741 5516786 11 99 4.0 2.5 3.2 2.6 144 chr2L 5516642 intergenic not near genes chr2L 5516714 intergenic not near genes chr2L 5516786 intergenic not near genes chr2L_11_5515001 chr2L_5515001 RAL-892 131 chr2L 5592381 5592386 chr2L 5592499 5592504 5 118 0.0 3.5 1.8 1.8 123 chr2L 5592381 intergenic not near genes chr2L 5592442 intergenic not near genes chr2L 5592504 intergenic not near genes chr2L_5_5590001 chr2L_5590001 RAL-892 132 chr2L 5647524 5647545 chr2L 5647650 5647671 7 126 3.5 8.5 6.0 1.0 147 chr2L 5647524 intron CG31646 - chr2L 5647598 intron CG31646 - chr2L 5647671 intron CG31646 - chr2L_7_5645001 chr2L_5645001 RAL-892 133 chr2L 5648373 5648397 chr2L 5648470 5648494 5 94 2.5 5.5 4.0 1.0 121 chr2L 5648373 intron CG31646 - chr2L 5648434 intron CG31646 - chr2L 5648494 intron CG31646 - chr2L_5_5645001 chr2L_5645001 RAL-892 134 chr2L 5657430 5657438 chr2L 5657578 5657586 6 148 5.5 1.0 3.2 1.4 156 chr2L 5657430 intron CG31646 - chr2L 5657508 intron CG31646 - chr2L 5657586 intron CG31646 - chr2L_6_5655001 chr2L_5655001 RAL-892 135 chr2L 5672155 5672200 chr2L 5672251 5672301 15 100 1.0 4.5 2.8 3.9 146 chr2L 5672155 intergenic not near genes chr2L 5672228 intergenic not near genes chr2L 5672301 intergenic not near genes chr2L_15_5670001 chr2L_5670001 RAL-892 136 chr2L 5686439 5686666 chr2L 5686541 5686750 20 103 3.0 7.0 5.0 3.3 311 chr2L 5686439 intergenic not near genes chr2L 5686594 intergenic not near genes chr2L 5686750 intergenic not near genes chr2L_20_5685001 chr2L_5685001 RAL-892 137 chr2L 5695841 5695890 chr2L 5695953 5696002 9 111 4.5 7.5 6.0 1.3 161 chr2L 5695841 intergenic not near genes chr2L 5695922 intergenic not near genes chr2L 5696002 intergenic not near genes chr2L_9_5695001 chr2L_5695001 RAL-892 138 chr2L 5805194 5805233 chr2L 5805316 5805341 12 121 6.5 2.5 4.5 2.2 147 chr2L 5805194 intergenic CG11034 + chr2L 5805268 intergenic CG11034 + chr2L 5805341 intergenic CG11034 + chr2L_12_5805001 chr2L_5805001 RAL-892 139 chr2L 5819677 5819708 chr2L 5819781 5819812 15 99 4.0 5.0 4.5 2.7 135 chr2L 5819677 intergenic not near genes chr2L 5819744 intergenic not near genes chr2L 5819812 intergenic not near genes chr2L_15_5815001 chr2L_5815001 RAL-892 140 chr2L 5827693 5827734 chr2L 5836721 5836758 roo 11 9026 5.5 6.0 5.8 1.6 9065 chr2L 5827693 intron TrissinR + chr2L 5832226 intron TrissinR + chr2L 5836758 intron TrissinR + chr2L_11_5830001 chr2L_5830001 RAL-892 141 chr2L 5837369 5837386 chr2L 5837777 5837831 5 421 5.5 3.0 4.2 1.0 462 chr2L 5837369 intron TrissinR + chr2L 5837600 intron TrissinR + chr2L 5837831 intron TrissinR + chr2L_5_5835001 chr2L_5835001 RAL-892 142 chr2L 5863386 5863420 chr2L 5863691 5863720 11 304 4.5 8.0 6.2 1.5 334 chr2L 5863386 intron rau - chr2L 5863553 intron rau - chr2L 5863720 intron rau - chr2L_11_5860001 chr2L_5860001 RAL-892 143 chr2L 5878733 5878784 chr2L 5878829 5878849 8 82 6.5 2.0 4.2 1.5 116 chr2L 5878733 intron rau - chr2L 5878791 intron rau - chr2L 5878849 intron rau - chr2L_8_5875001 chr2L_5875001 RAL-892 144 chr2L 5897576 5897595 chr2L 5897679 5897698 14 102 8.5 4.0 6.2 1.9 122 chr2L 5897576 intergenic not near genes chr2L 5897637 intergenic not near genes chr2L 5897698 intergenic not near genes chr2L_14_5895001 chr2L_5895001 RAL-892 145 chr2L 5897596 5897626 chr2L 5897677 5897694 9 89 3.0 3.5 3.2 2.1 98 chr2L 5897596 intergenic not near genes chr2L 5897645 intergenic not near genes chr2L 5897694 intergenic not near genes chr2L_9_5895001 chr2L_5895001 RAL-892 146 chr2L 5926250 5926451 chr2L 5926350 5926559 15 144 0.0 0.0 0.0 15.0 309 chr2L 5926250 intron dsf + chr2L 5926404 intron dsf + chr2L 5926559 intron dsf + chr2L_15_5925001 chr2L_5925001 RAL-892 147 chr2L 5989015 5989065 chr2L 5989111 5989161 20 93 4.5 0.0 2.2 6.2 146 chr2L 5989015 intergenic ifc +,lid - chr2L 5989088 intergenic ifc +,lid - chr2L 5989161 intergenic lid -,ifc + chr2L_20_5985001 chr2L_5985001 RAL-892 148 chr2L 5993317 5993361 chr2L 5993422 5993472 16 110 3.5 2.0 2.8 4.2 155 chr2L 5993317 exon lid - chr2L 5993394 intron lid - chr2L 5993472 exon lid - chr2L_16_5990001 chr2L_5990001 RAL-892 149 chr2L 6136532 6136578 chr2L 6136649 6136695 11 114 1.5 5.5 3.5 2.4 163 chr2L 6136532 intergenic not near genes chr2L 6136614 intergenic not near genes chr2L 6136695 intergenic not near genes chr2L_11_6135001 chr2L_6135001 RAL-892 150 chr2L 6185439 6185473 chr2L 6185526 6185570 8 94 1.5 6.5 4.0 1.6 131 chr2L 6185439 intron CG34380 + chr2L 6185504 intron CG34380 + chr2L 6185570 intron CG34380 + chr2L_8_6185001 chr2L_6185001 RAL-892 151 chr2L 6204552 6204596 chr2L 6204648 6204692 16 93 2.5 4.0 3.2 3.8 140 chr2L 6204552 intron CG34380 + chr2L 6204622 intron CG34380 + chr2L 6204692 intron CG34380 + chr2L_16_6200001 chr2L_6200001 RAL-892 152 chr2L 6227697 6227727 chr2L 6227801 6227831 13 103 5.0 5.5 5.2 2.1 134 chr2L 6227697 intergenic not near genes chr2L 6227764 intergenic not near genes chr2L 6227831 intergenic not near genes chr2L_13_6225001 chr2L_6225001 RAL-892 153 chr2L 6283923 6283946 chr2L 6284054 6284077 7 129 3.0 7.5 5.2 1.1 154 chr2L 6283923 intron Ddr + chr2L 6284000 intron Ddr + chr2L 6284077 intron Ddr + chr2L_7_6280001 chr2L_6280001 RAL-892 154 chr2L 6349062 6349072 chr2L 6349160 6349170 4 98 3.5 8.0 5.8 0.6 108 chr2L 6349062 intergenic CG9498 - chr2L 6349116 intergenic CG9498 - chr2L 6349170 intergenic CG9498 - chr2L_4_6345001 chr2L_6345001 RAL-892 155 chr2L 6363130 6363182 chr2L 6366072 6366124 Burdock 14 2938 6.5 2.0 4.2 2.7 2994 chr2L 6363130 intergenic not near genes chr2L 6364627 intergenic not near genes chr2L 6366124 intergenic not near genes chr2L_14_6360001 chr2L_6360001 RAL-892 156 chr2L 6387985 6388023 chr2L 6388084 6388122 17 99 8.0 5.5 6.8 2.2 137 chr2L 6387985 intron CG42368 - chr2L 6388054 intron CG42368 - chr2L 6388122 intron CG42368 - chr2L_17_6385001 chr2L_6385001 RAL-892 157 chr2L 6426836 6426886 chr2L 6445116 6445166 roo 18 18277 2.5 3.5 3.0 4.5 18330 chr2L 6426836 3` UTR CG9527 - chr2L 6436001 intron CG9527 - chr2L 6445166 exon CG9527 - chr2L_18_6435001 chr2L_6435001 RAL-892 158 chr2L 6463539 6463570 chr2L 6463650 6463661 5 101 3.0 2.0 2.5 1.4 122 chr2L 6463539 exon CG16947 - chr2L 6463600 exon CG16947 - chr2L 6463661 exon CG16947 - chr2L_5_6460001 chr2L_6460001 RAL-892 159 chr2L 6544354 6544394 chr2L 6544466 6544506 19 111 3.0 4.0 3.5 4.2 152 chr2L 6544354 intron eya - chr2L 6544430 intron eya - chr2L 6544506 intron eya - chr2L_19_6540001 chr2L_6540001 RAL-892 160 chr2L 6640897 6640909 chr2L 6641008 6641021 6 113 11.5 6.0 8.8 0.6 124 chr2L 6640897 exon CG31635 - chr2L 6640959 intron CG31635 - chr2L 6641021 intron CG31635 - chr2L_6_6640001 chr2L_6640001 RAL-892 161 chr2L 6640911 6640936 chr2L 6641005 6641051 6 110 7.0 5.5 6.2 0.8 140 chr2L 6640911 exon CG31635 - chr2L 6640981 intron CG31635 - chr2L 6641051 intron CG31635 - chr2L_6_6640001 chr2L_6640001 RAL-892 162 chr2L 6740744 6740754 chr2L 6740851 6740853 4 105 0.0 8.0 4.0 0.8 109 chr2L 6740744 intergenic not near genes chr2L 6740798 intergenic not near genes chr2L 6740853 intergenic not near genes chr2L_4_6740001 chr2L_6740001 RAL-892 163 chr2L 6799516 6799571 chr2L 6799623 6799663 11 106 3.0 1.5 2.2 3.4 147 chr2L 6799516 5` UTR CR43610 + chr2L 6799590 5` UTR CR43610 + chr2L 6799663 intergenic CR43610 +,CG17376 - chr2L_11_6795001 chr2L_6795001 RAL-892 164 chr2L 6850373 6850418 chr2L 6850498 6850544 17 126 4.5 1.5 3.0 4.2 171 chr2L 6850373 intergenic not near genes chr2L 6850458 intergenic not near genes chr2L 6850544 intergenic not near genes chr2L_17_6850001 chr2L_6850001 RAL-892 165 chr2L 6972217 6972262 chr2L 6972654 6972696 4 435 0.0 2.5 1.2 1.8 479 chr2L 6972217 intergenic snRNP-U1-70K - chr2L 6972456 intergenic uif - chr2L 6972696 intergenic uif - chr2L_4_6970001 chr2L_6970001 RAL-892 166 chr2L 7005210 7005255 chr2L 7005326 7005371 22 116 4.5 5.5 5.0 3.7 161 chr2L 7005210 intron uif - chr2L 7005290 intron uif - chr2L 7005371 intron uif - chr2L_22_7005001 chr2L_7005001 RAL-892 167 chr2L 7042042 7042088 chr2L 7042151 7042197 15 108 4.0 1.5 2.8 3.9 155 chr2L 7042042 intron milt + chr2L 7042120 intron milt + chr2L 7042197 intron milt + chr2L_15_7040001 chr2L_7040001 RAL-892 168 chr2L 7088886 7088899 chr2L 7089107 7089120 5 221 0.0 0.0 0.0 5.0 234 chr2L 7088886 intergenic not near genes chr2L 7089003 intergenic not near genes chr2L 7089120 intergenic not near genes chr2L_5_7085001 chr2L_7085001 RAL-892 169 chr2L 7089982 7089992 chr2L 7090079 7090089 4 97 4.0 2.0 3.0 1.0 107 chr2L 7089982 intergenic not near genes chr2L 7090036 intergenic not near genes chr2L 7090089 intergenic not near genes chr2L_4_7090001 chr2L_7090001 RAL-892 170 chr2L 7125772 7125807 chr2L 7125908 7125943 9 136 5.0 1.5 3.2 2.1 171 chr2L 7125772 intron Pvf3 - chr2L 7125858 intron Pvf3 - chr2L 7125943 intron Pvf3 - chr2L_9_7125001 chr2L_7125001 RAL-892 171 chr2L 7126842 7126875 chr2L 7126941 7126974 12 99 5.5 0.0 2.8 3.2 132 chr2L 7126842 intron Pvf3 - chr2L 7126908 intron Pvf3 - chr2L 7126974 intron Pvf3 - chr2L_12_7125001 chr2L_7125001 RAL-892 172 chr2L 7151816 7151852 chr2L 7152131 7152167 11 315 3.0 7.0 5.0 1.8 351 chr2L 7151816 intron Pvf3 - chr2L 7151992 intron Pvf3 - chr2L 7152167 intron Pvf3 - chr2L_11_7150001 chr2L_7150001 RAL-892 173 chr2L 7249616 7249651 chr2L 7249709 7249731 6 90 0.0 3.5 1.8 2.1 115 chr2L 7249616 intergenic Ndae1 - chr2L 7249674 intergenic Ndae1 - chr2L 7249731 intergenic Ndae1 - chr2L_6_7245001 chr2L_7245001 RAL-892 174 chr2L 7254529 7254543 chr2L 7254627 7254641 6 97 0.0 6.0 3.0 1.5 112 chr2L 7254529 intergenic not near genes chr2L 7254585 intergenic not near genes chr2L 7254641 intergenic not near genes chr2L_6_7250001 chr2L_7250001 RAL-892 175 chr2L 7325911 7325943 chr2L 7326001 7326046 4 90 4.5 1.5 3.0 1.0 135 chr2L 7325911 intergenic not near genes chr2L 7325978 intergenic not near genes chr2L 7326046 intergenic not near genes chr2L_4_7325001 chr2L_7325001 RAL-892 176 chr2L 7331653 7331680 chr2L 7331755 7331787 13 104 5.5 5.5 5.5 2.0 134 chr2L 7331653 intergenic not near genes chr2L 7331720 intergenic not near genes chr2L 7331787 intergenic not near genes chr2L_13_7330001 chr2L_7330001 RAL-892 177 chr2L 7335261 7335273 chr2L 7335367 7335379 4 106 6.0 3.5 4.8 0.7 118 chr2L 7335261 intron Wnt6 + chr2L 7335320 intron Wnt6 + chr2L 7335379 intron Wnt6 + chr2L_4_7335001 chr2L_7335001 RAL-892 178 chr2L 7343304 7343354 chr2L 7350440 7350489 roo 9 7130 2.0 2.5 2.2 2.8 7185 chr2L 7343304 intron Wnt6 + chr2L 7346896 intron Wnt6 + chr2L 7350489 intron Wnt6 + chr2L_9_7345001 chr2L_7345001 RAL-892 179 chr2L 7363501 7363555 chr2L 7363599 7363653 10 98 2.0 3.0 2.5 2.9 152 chr2L 7363501 5` UTR Wnt10 + chr2L 7363577 5` UTR Wnt10 + chr2L 7363653 5` UTR Wnt10 + chr2L_10_7360001 chr2L_7360001 RAL-892 180 chr2L 7493406 7493419 chr2L 7493512 7493525 5 106 0.0 9.0 4.5 0.9 119 chr2L 7493406 intron Ziz - chr2L 7493466 intron Ziz - chr2L 7493525 intron Ziz - chr2L_5_7490001 chr2L_7490001 RAL-892 181 chr2L 7502717 7502767 chr2L 7502813 7502827 21 89 2.0 5.0 3.5 4.7 110 chr2L 7502717 intron RapGAP1 - chr2L 7502772 intron RapGAP1 - chr2L 7502827 intron RapGAP1 - chr2L_21_7500001 chr2L_7500001 RAL-892 182 chr2L 7528644 7528680 chr2L 7528948 7528984 8 304 2.5 4.5 3.5 1.8 340 chr2L 7528644 intron RapGAP1 - chr2L 7528814 intron RapGAP1 - chr2L 7528984 intron RapGAP1 - chr2L_8_7525001 chr2L_7525001 RAL-892 183 chr2L 7555710 7555746 chr2L 7555814 7555850 11 104 4.0 5.5 4.8 1.9 140 chr2L 7555710 intron RapGAP1 - chr2L 7555780 intron RapGAP1 - chr2L 7555850 intron RapGAP1 - chr2L_11_7555001 chr2L_7555001 RAL-892 184 chr2L 7564551 7564577 chr2L 7564734 7564760 10 182 4.0 3.0 3.5 2.2 209 chr2L 7564551 intron RapGAP1 - chr2L 7564656 intron RapGAP1 - chr2L 7564760 intron RapGAP1 - chr2L_10_7560001 chr2L_7560001 RAL-892 185 chr2L 7640409 7640421 chr2L 7640515 7640527 8 106 4.0 2.5 3.2 1.9 118 chr2L 7640409 intergenic not near genes chr2L 7640468 intergenic not near genes chr2L 7640527 intergenic not near genes chr2L_8_7640001 chr2L_7640001 RAL-892 186 chr2L 7769421 7769429 chr2L 7769532 7769539 4 110 8.5 1.5 5.0 0.7 118 chr2L 7769421 intron CG7191 + chr2L 7769480 intron CG7191 + chr2L 7769539 intron CG7191 + chr2L_4_7765001 chr2L_7765001 RAL-892 187 chr2L 7817808 7817813 chr2L 7820901 7820934 4 3102 12.5 25.5 19.0 0.2 3126 chr2L 7817808 exon LanB1 + chr2L 7819371 exon LanB1 + chr2L 7820934 intergenic CR45008 -,LanB1 +,CG7115 + chr2L_4_7815001 chr2L_7815001 RAL-892 188 chr2L 7863036 7863071 chr2L 7863808 7863843 12 769 5.0 2.5 3.8 2.5 807 chr2L 7863036 intergenic not near genes chr2L 7863440 intergenic not near genes chr2L 7863843 intergenic not near genes chr2L_12_7860001 chr2L_7860001 RAL-892 189 chr2L 7867550 7867598 chr2L 7867663 7867712 16 114 4.0 5.5 4.8 2.8 162 chr2L 7867550 intron Proc - chr2L 7867631 intron Proc - chr2L 7867712 intron Proc - chr2L_16_7865001 chr2L_7865001 RAL-892 190 chr2L 7959020 7959073 chr2L 7960451 7960506 pogo 13 1427 3.5 2.0 2.8 3.4 1486 chr2L 7959020 intron Snoo - chr2L 7959763 intron Snoo - chr2L 7960506 intron Snoo - chr2L_13_7955001 chr2L_7955001 RAL-892 191 chr2L 7968244 7968275 chr2L 7968794 7968825 4 550 2.0 4.5 3.2 1.0 581 chr2L 7968244 intron Snoo - chr2L 7968534 intron Snoo - chr2L 7968825 intron Snoo - chr2L_4_7965001 chr2L_7965001 RAL-892 192 chr2L 8003034 8003063 chr2L 8003130 8003165 8 101 4.5 10.0 7.2 1.0 131 chr2L 8003034 intron Wwox - chr2L 8003100 intron Wwox - chr2L 8003165 intron Wwox - chr2L_8_8000001 chr2L_8000001 RAL-892 193 chr2L 8013602 8013614 chr2L 8018826 8018838 copia 6 5224 10.0 0.0 5.0 1.0 5236 chr2L 8013602 intron Tg + chr2L 8016220 intron Tg + chr2L 8018838 intron Tg + chr2L_6_8015001 chr2L_8015001 RAL-892 194 chr2L 8018820 8018831 chr2L 8023624 8023635 Doc 4 4804 0.0 10.0 5.0 0.7 4815 chr2L 8018820 intron Tg + chr2L 8021228 intron Tg + chr2L 8023635 intron Tg + chr2L_4_8020001 chr2L_8020001 RAL-892 195 chr2L 8044076 8044121 chr2L 8044175 8044220 12 99 2.0 3.0 2.5 3.4 144 chr2L 8044076 intron CG7466 + chr2L 8044148 intron CG7466 + chr2L 8044220 intron CG7466 + chr2L_12_8040001 chr2L_8040001 RAL-892 196 chr2L 8083874 8083905 chr2L 8084128 8084167 7 261 3.0 6.5 4.8 1.2 293 chr2L 8083874 intron Bsg + chr2L 8084020 intron Bsg + chr2L 8084167 intron Bsg + chr2L_7_8080001 chr2L_8080001 RAL-892 197 chr2L 8230299 8230347 chr2L 8230403 8230447 9 102 1.5 2.5 2.0 3.0 148 chr2L 8230299 5` UTR Pvr - chr2L 8230373 intron Pvr - chr2L 8230447 intron Pvr - chr2L_9_8230001 chr2L_8230001 RAL-892 198 chr2L 8231919 8232021 chr2L 8232022 8232119 7 120 0.0 0.0 0.0 7.0 200 chr2L 8231919 intron Pvr - chr2L 8232019 intron Pvr - chr2L 8232119 intron Pvr - chr2L_7_8230001 chr2L_8230001 RAL-892 199 chr2L 8266194 8266225 chr2L 8266348 8266362 8 152 4.0 6.0 5.0 1.3 168 chr2L 8266194 intron Btk29A - chr2L 8266278 intron Btk29A - chr2L 8266362 intron Btk29A - chr2L_8_8265001 chr2L_8265001 RAL-892 200 chr2L 8271642 8271655 chr2L 8271732 8271751 4 94 1.0 6.5 3.8 0.8 109 chr2L 8271642 intron Btk29A - chr2L 8271696 intron Btk29A - chr2L 8271751 intron Btk29A - chr2L_4_8270001 chr2L_8270001 RAL-892 201 chr2L 8452402 8452447 chr2L 8461593 8461638 roo 21 9190 6.0 7.5 6.8 2.7 9236 chr2L 8452402 intron fu12 - chr2L 8457020 intron fu12 - chr2L 8461638 intron fu12 - chr2L_21_8455001 chr2L_8455001 RAL-892 202 chr2L 8502639 8502691 chr2L 8502743 8502795 14 99 2.0 2.0 2.0 4.7 156 chr2L 8502639 intron Dh31 - chr2L 8502717 intron Dh31 - chr2L 8502795 intron Dh31 - chr2L_14_8500001 chr2L_8500001 RAL-892 203 chr2L 8538143 8538157 chr2L 8538239 8538253 7 96 10.0 0.5 5.2 1.1 110 chr2L 8538143 intron CG17834 + chr2L 8538198 intron CG17834 + chr2L 8538253 intron CG17834 + chr2L_7_8535001 chr2L_8535001 RAL-892 204 chr2L 8567656 8567708 chr2L 8567753 8567805 16 97 8.0 6.0 7.0 2.0 149 chr2L 8567656 intron Sema-1a + chr2L 8567730 intron Sema-1a + chr2L 8567805 intron Sema-1a + chr2L_16_8565001 chr2L_8565001 RAL-892 205 chr2L 8594446 8594492 chr2L 8601520 8601566 297 10 7074 3.0 3.5 3.2 2.4 7120 chr2L 8594446 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598006 intron Sema-1a + chr2L 8601566 intron Sema-1a + chr2L_10_8595001 chr2L_8595001 RAL-892 206 chr2L 8653082 8653132 chr2L 8653184 8653234 9 102 5.0 2.0 3.5 2.0 152 chr2L 8653082 intron Sema-1a + chr2L 8653158 intron Sema-1a + chr2L 8653234 intron Sema-1a + chr2L_9_8650001 chr2L_8650001 RAL-892 207 chr2L 8695843 8695887 chr2L 8695950 8695994 16 106 4.5 5.0 4.8 2.8 151 chr2L 8695843 intron Hnf4 - chr2L 8695918 intron Hnf4 - chr2L 8695994 intron Hnf4 - chr2L_16_8695001 chr2L_8695001 RAL-892 208 chr2L 8723095 8723145 chr2L 8731492 8731542 Tirant 17 8394 1.5 4.5 3.0 4.2 8447 chr2L 8723095 intron raw - chr2L 8727318 intron raw - chr2L 8731542 intron raw - chr2L_17_8725001 chr2L_8725001 RAL-892 209 chr2L 8759972 8759984 chr2L 8760133 8760145 7 161 5.5 0.0 2.8 1.8 173 chr2L 8759972 intergenic not near genes chr2L 8760058 intergenic not near genes chr2L 8760145 intergenic not near genes chr2L_7_8760001 chr2L_8760001 RAL-892 210 chr2L 8788757 8788788 chr2L 8788858 8788899 9 110 1.0 5.0 3.0 2.2 142 chr2L 8788757 intergenic not near genes chr2L 8788828 intergenic not near genes chr2L 8788899 intergenic not near genes chr2L_9_8785001 chr2L_8785001 RAL-892 211 chr2L 8820919 8820954 chr2L 8821018 8821053 11 99 2.0 8.5 5.2 1.8 134 chr2L 8820919 intergenic not near genes chr2L 8820986 intergenic not near genes chr2L 8821053 intergenic not near genes chr2L_11_8820001 chr2L_8820001 RAL-892 212 chr2L 8876596 8876646 chr2L 8876738 8876788 17 144 30.0 23.0 26.5 0.6 192 chr2L 8876596 intergenic not near genes chr2L 8876692 intergenic not near genes chr2L 8876788 intergenic not near genes chr2L_17_8875001 chr2L_8875001 RAL-892 213 chr2L 8909921 8909949 chr2L 8910178 8910206 11 257 6.5 4.0 5.2 1.8 285 chr2L 8909921 intron CG34398 + chr2L 8910064 intron CG34398 + chr2L 8910206 intron CG34398 + chr2L_11_8910001 chr2L_8910001 RAL-892 214 chr2L 8910784 8910802 chr2L 8911071 8911075 4 284 0.0 3.5 1.8 1.4 291 chr2L 8910784 intron CG34398 + chr2L 8910930 intron CG34398 + chr2L 8911075 intron CG34398 + chr2L_4_8910001 chr2L_8910001 RAL-892 215 chr2L 8956205 8956230 chr2L 8956302 8956327 7 97 5.5 0.0 2.8 1.8 122 chr2L 8956205 intron CG31886 - chr2L 8956266 intron CG31886 - chr2L 8956327 intron CG31886 - chr2L_7_8955001 chr2L_8955001 RAL-892 216 chr2L 8976209 8976249 chr2L 8976411 8976459 12 207 0.0 4.0 2.0 4.0 250 chr2L 8976209 intergenic not near genes chr2L 8976334 intergenic not near genes chr2L 8976459 intergenic not near genes chr2L_12_8975001 chr2L_8975001 RAL-892 217 chr2L 9000259 9000311 chr2L 9007789 9007841 roo 27 7528 5.0 0.0 2.5 7.7 7582 chr2L 9000259 intergenic Try29F + chr2L 9004050 intergenic not near genes chr2L 9007841 intergenic not near genes chr2L_27_9000001 chr2L_9000001 RAL-892 218 chr2L 9023135 9023184 chr2L 9023252 9023301 12 116 5.0 8.5 6.8 1.5 166 chr2L 9023135 intergenic not near genes chr2L 9023218 intergenic not near genes chr2L 9023301 intergenic not near genes chr2L_12_9020001 chr2L_9020001 RAL-892 219 chr2L 9027964 9027981 chr2L 9028068 9028085 5 104 4.5 0.0 2.2 1.6 121 chr2L 9027964 intron,intron CG9582 -,CR44352 - chr2L 9028024 intron,intron CG9582 -,CR44352 - chr2L 9028085 intron,intron CG9582 -,CR44352 - chr2L_5_9025001 chr2L_9025001 RAL-892 220 chr2L 9040034 9040061 chr2L 9040122 9040168 6 104 1.5 4.5 3.0 1.5 134 chr2L 9040034 intergenic not near genes chr2L 9040101 intergenic not near genes chr2L 9040168 intergenic not near genes chr2L_6_9040001 chr2L_9040001 RAL-892 221 chr2L 9044097 9044129 chr2L 9044215 9044256 5 119 0.5 5.0 2.8 1.3 159 chr2L 9044097 intergenic not near genes chr2L 9044176 intergenic not near genes chr2L 9044256 intergenic not near genes chr2L_5_9040001 chr2L_9040001 RAL-892 222 chr2L 9049595 9049626 chr2L 9049701 9049732 10 105 3.0 4.5 3.8 2.1 137 chr2L 9049595 intergenic not near genes chr2L 9049664 intergenic not near genes chr2L 9049732 intergenic not near genes chr2L_10_9045001 chr2L_9045001 RAL-892 223 chr2L 9084339 9084340 chr2L 16217660 16217660 5 7133321 13.5 18.5 16.0 0.3 7133321 chr2L 9084339 intron Toll-4 + chr2L 12651000 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_5_12650001 chr2L_12650001 RAL-892 224 chr2L 9095554 9095599 chr2L 9095661 9095701 16 106 5.0 5.0 5.0 2.7 147 chr2L 9095554 intergenic not near genes chr2L 9095628 intergenic not near genes chr2L 9095701 intergenic not near genes chr2L_16_9095001 chr2L_9095001 RAL-892 225 chr2L 9113784 9113809 chr2L 9113914 9113939 9 130 3.0 2.5 2.8 2.4 155 chr2L 9113784 intergenic Or30a + chr2L 9113862 intergenic not near genes chr2L 9113939 intergenic not near genes chr2L_9_9110001 chr2L_9110001 RAL-892 226 chr2L 9195854 9195880 chr2L 9195957 9195983 5 103 3.0 6.0 4.5 0.9 129 chr2L 9195854 intron tai + chr2L 9195918 intron tai + chr2L 9195983 intron tai + chr2L_5_9195001 chr2L_9195001 RAL-892 227 chr2L 9217959 9217996 chr2L 9222762 9222802 Doc 17 4805 3.5 4.0 3.8 3.5 4843 chr2L 9217959 intron tai + chr2L 9220380 intron tai + chr2L 9222802 intron tai + chr2L_17_9220001 chr2L_9220001 RAL-892 228 chr2L 9225833 9225873 chr2L 9225943 9225983 9 110 6.0 3.5 4.8 1.6 150 chr2L 9225833 intron tai + chr2L 9225908 intron tai + chr2L 9225983 intron tai + chr2L_9_9225001 chr2L_9225001 RAL-892 229 chr2L 9264334 9264375 chr2L 9264445 9264495 18 119 7.5 5.5 6.5 2.4 161 chr2L 9264334 intron Ggamma30A + chr2L 9264414 intron Ggamma30A + chr2L 9264495 intron Ggamma30A + chr2L_18_9260001 chr2L_9260001 RAL-892 230 chr2L 9287307 9287354 chr2L 9287424 9287471 17 114 5.5 5.5 5.5 2.6 164 chr2L 9287307 intron Ggamma30A + chr2L 9287389 intron Ggamma30A + chr2L 9287471 intron Ggamma30A + chr2L_17_9285001 chr2L_9285001 RAL-892 231 chr2L 9290753 9290798 chr2L 9290850 9290895 4 92 2.5 1.5 2.0 1.3 142 chr2L 9290753 intron Ggamma30A + chr2L 9290824 intron Ggamma30A + chr2L 9290895 intron Ggamma30A + chr2L_4_9290001 chr2L_9290001 RAL-892 232 chr2L 9297365 9297405 chr2L 9297457 9297502 14 96 2.5 6.5 4.5 2.5 137 chr2L 9297365 3` UTR Ggamma30A + chr2L 9297434 3` UTR Ggamma30A + chr2L 9297502 3` UTR Ggamma30A + chr2L_14_9295001 chr2L_9295001 RAL-892 233 chr2L 9300681 9300689 chr2L 9300786 9300794 4 105 0.0 0.0 0.0 4.0 113 chr2L 9300681 3` UTR Ggamma30A + chr2L 9300738 3` UTR Ggamma30A + chr2L 9300794 3` UTR Ggamma30A + chr2L_4_9300001 chr2L_9300001 RAL-892 234 chr2L 9303202 9303497 chr2L 9303306 9303597 18 100 10.0 3.0 6.5 2.4 395 chr2L 9303202 intergenic not near genes chr2L 9303400 intergenic not near genes chr2L 9303597 intergenic not near genes chr2L_18_9300001 chr2L_9300001 RAL-892 235 chr2L 9303534 9303548 chr2L 9303594 9303621 12 93 4.5 3.0 3.8 2.5 87 chr2L 9303534 intergenic not near genes chr2L 9303578 intergenic not near genes chr2L 9303621 intergenic not near genes chr2L_12_9300001 chr2L_9300001 RAL-892 236 chr2L 9362132 9362149 chr2L 9362230 9362245 4 98 4.5 3.5 4.0 0.8 113 chr2L 9362132 intergenic not near genes chr2L 9362188 intergenic not near genes chr2L 9362245 intergenic not near genes chr2L_4_9360001 chr2L_9360001 RAL-892 237 chr2L 9380230 9380251 chr2L 9380345 9380366 6 115 2.5 3.0 2.8 1.6 136 chr2L 9380230 exon Shawl - chr2L 9380298 intron Shawl - chr2L 9380366 intron Shawl - chr2L_6_9380001 chr2L_9380001 RAL-892 238 chr2L 9385102 9385150 chr2L 9385212 9385260 12 110 2.0 8.0 5.0 2.0 158 chr2L 9385102 intron Shawl - chr2L 9385181 intron Shawl - chr2L 9385260 intron Shawl - chr2L_12_9385001 chr2L_9385001 RAL-892 239 chr2L 9387231 9387278 chr2L 9387348 9387396 14 117 2.0 3.0 2.5 4.0 165 chr2L 9387231 intron Shawl - chr2L 9387314 intron Shawl - chr2L 9387396 intron,5` UTR Shawl -,Aldh + chr2L_14_9385001 chr2L_9385001 RAL-892 240 chr2L 9393489 9393507 chr2L 9396473 9396494 jockey 5 2986 4.5 5.5 5.0 0.8 3005 chr2L 9393489 intron Shawl - chr2L 9394992 intron Shawl - chr2L 9396494 intron Shawl - chr2L_5_9390001 chr2L_9390001 RAL-892 241 chr2L 9412634 9412681 chr2L 9412798 9412845 12 164 4.0 5.5 4.8 2.1 211 chr2L 9412634 intron Shawl - chr2L 9412740 intron Shawl - chr2L 9412845 intron Shawl - chr2L_12_9410001 chr2L_9410001 RAL-892 242 chr2L 9428508 9428535 chr2L 9428607 9428634 8 99 1.5 6.0 3.8 1.7 126 chr2L 9428508 3` UTR CG42847 + chr2L 9428571 3` UTR CG42847 + chr2L 9428634 3` UTR CG42847 + chr2L_8_9425001 chr2L_9425001 RAL-892 243 chr2L 9451005 9451061 chr2L 9451130 9451177 15 124 0.0 1.5 0.8 8.3 172 chr2L 9451005 intron numb + chr2L 9451091 intron numb + chr2L 9451177 intron numb + chr2L_15_9450001 chr2L_9450001 RAL-892 244 chr2L 9463927 9463971 chr2L 9464025 9464070 12 99 0.0 3.5 1.8 4.3 143 chr2L 9463927 intergenic not near genes chr2L 9463998 intergenic not near genes chr2L 9464070 intergenic not near genes chr2L_12_9460001 chr2L_9460001 RAL-892 245 chr2L 9474764 9474809 chr2L 9474878 9474923 8 114 1.5 6.5 4.0 1.6 159 chr2L 9474764 intergenic not near genes chr2L 9474844 intergenic not near genes chr2L 9474923 intergenic not near genes chr2L_8_9470001 chr2L_9470001 RAL-892 246 chr2L 9506351 9506367 chr2L 9506453 9506469 8 102 1.5 6.5 4.0 1.6 118 chr2L 9506351 intron CG33298 + chr2L 9506410 intron CG33298 + chr2L 9506469 intron CG33298 + chr2L_8_9505001 chr2L_9505001 RAL-892 247 chr2L 9570400 9570431 chr2L 9570514 9570547 6 123 3.5 1.5 2.5 1.7 147 chr2L 9570400 intron CG3838 + chr2L 9570474 intron CG3838 + chr2L 9570547 intron CG3838 + chr2L_6_9570001 chr2L_9570001 RAL-892 248 chr2L 9578663 9578707 chr2L 9578784 9578828 15 121 6.5 4.5 5.5 2.3 165 chr2L 9578663 3` UTR CG31709 - chr2L 9578746 3` UTR CG31709 - chr2L 9578828 exon CG31709 - chr2L_15_9575001 chr2L_9575001 RAL-892 249 chr2L 9610109 9610144 chr2L 9610188 9610222 9 87 2.5 3.5 3.0 2.2 113 chr2L 9610109 intron gcm2 + chr2L 9610166 intron gcm2 + chr2L 9610222 intron gcm2 + chr2L_9_9610001 chr2L_9610001 RAL-892 250 chr2L 9704830 9704899 chr2L 9704956 9705012 8 121 0.0 3.0 1.5 3.2 182 chr2L 9704830 intron,intron pelo +,CG31710 - chr2L 9704921 intron,intron pelo +,CG31710 - chr2L 9705012 intron,intron pelo +,CG31710 - chr2L_8_9700001 chr2L_9700001 RAL-892 251 chr2L 9706860 9706892 chr2L 9706965 9706997 8 105 5.5 4.5 5.0 1.3 137 chr2L 9706860 intron pelo + chr2L 9706928 intron pelo + chr2L 9706997 intron pelo + chr2L_8_9705001 chr2L_9705001 RAL-892 252 chr2L 9719758 9719778 chr2L 9719861 9719881 5 103 0.0 2.0 1.0 2.5 123 chr2L 9719758 intron Nckx30C - chr2L 9719820 intron Nckx30C - chr2L 9719881 intron Nckx30C - chr2L_5_9715001 chr2L_9715001 RAL-892 253 chr2L 9767907 9767938 chr2L 9767980 9768004 6 87 1.5 3.5 2.5 1.7 97 chr2L 9767907 intron,exon ppk18 -,CG4017 + chr2L 9767956 intron,exon ppk18 -,CG4017 + chr2L 9768004 intron,exon ppk18 -,CG4017 + chr2L_6_9765001 chr2L_9765001 RAL-892 254 chr2L 9775967 9776010 chr2L 9776064 9776112 17 102 0.5 2.5 1.5 6.8 145 chr2L 9775967 intergenic not near genes chr2L 9776040 intergenic not near genes chr2L 9776112 intergenic not near genes chr2L_17_9775001 chr2L_9775001 RAL-892 255 chr2L 9836380 9836424 chr2L 9836480 9836524 20 99 7.0 5.5 6.2 2.8 144 chr2L 9836380 intron nAChRalpha6 - chr2L 9836452 intron nAChRalpha6 - chr2L 9836524 intron nAChRalpha6 - chr2L_20_9835001 chr2L_9835001 RAL-892 256 chr2L 9837425 9837447 chr2L 9837523 9837529 8 95 4.5 5.5 5.0 1.3 104 chr2L 9837425 intron nAChRalpha6 - chr2L 9837477 intron nAChRalpha6 - chr2L 9837529 intron nAChRalpha6 - chr2L_8_9835001 chr2L_9835001 RAL-892 257 chr2L 9973714 9973754 chr2L 9980845 9980892 HMS-Beagle 13 7134 2.0 4.0 3.0 3.2 7178 chr2L 9973714 intergenic not near genes chr2L 9977303 intergenic not near genes chr2L 9980892 intergenic not near genes chr2L_13_9975001 chr2L_9975001 RAL-892 258 chr2L 9986333 9986380 chr2L 9986448 9986467 7 106 5.5 7.0 6.2 1.0 134 chr2L 9986333 intron bib + chr2L 9986400 intron bib + chr2L 9986467 intron bib + chr2L_7_9985001 chr2L_9985001 RAL-892 259 chr2L 10051735 10051753 chr2L 10051824 10051847 6 99 7.0 5.5 6.2 0.8 112 chr2L 10051735 5` UTR CR44874 + chr2L 10051791 5` UTR CR44874 + chr2L 10051847 5` UTR CR44874 + chr2L_6_10050001 chr2L_10050001 RAL-892 260 chr2L 10095612 10095664 chr2L 10095712 10095764 18 99 5.5 3.5 4.5 3.3 152 chr2L 10095612 intron CG44153 - chr2L 10095688 intron CG44153 - chr2L 10095764 intron CG44153 - chr2L_18_10095001 chr2L_10095001 RAL-892 261 chr2L 10156309 10156334 chr2L 10163799 10163809 blood 4 7486 7.5 8.5 8.0 0.4 7500 chr2L 10156309 intron,3` UTR CG44153 -,CG4839 + chr2L 10160059 intron CG44153 - chr2L 10163809 intron CG44153 - chr2L_4_10160001 chr2L_10160001 RAL-892 262 chr2L 10294172 10294195 chr2L 10294272 10294295 7 100 3.5 1.5 2.5 2.0 123 chr2L 10294172 intron Hand - chr2L 10294234 intron Hand - chr2L 10294295 intron Hand - chr2L_7_10290001 chr2L_10290001 RAL-892 263 chr2L 10348365 10348405 chr2L 10348468 10348508 15 103 6.5 0.0 3.2 3.6 143 chr2L 10348365 intron CG34367 - chr2L 10348436 intron CG34367 - chr2L 10348508 intron CG34367 - chr2L_15_10345001 chr2L_10345001 RAL-892 264 chr2L 10474381 10474396 chr2L 10474478 10474482 5 97 5.0 5.5 5.2 0.8 101 chr2L 10474381 intergenic RluA-1 - chr2L 10474432 intergenic RluA-1 - chr2L 10474482 intergenic RluA-1 - chr2L_5_10470001 chr2L_10470001 RAL-892 265 chr2L 10490277 10490306 chr2L 10490358 10490406 7 99 3.5 2.5 3.0 1.8 129 chr2L 10490277 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490342 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490406 3` UTR,3` UTR CG6144 +,CG13144 - chr2L_7_10490001 chr2L_10490001 RAL-892 266 chr2L 10515342 10515389 chr2L 10515455 10515501 19 113 4.0 5.0 4.5 3.5 159 chr2L 10515342 intron,intron CG45083 -,Fatp - chr2L 10515422 intron,intron CG45083 -,Fatp - chr2L 10515501 intron,intron CG45083 -,Fatp - chr2L_19_10515001 chr2L_10515001 RAL-892 267 chr2L 10519489 10519504 chr2L 10519768 10519783 8 280 0.0 1.0 0.5 5.3 294 chr2L 10519489 intergenic Lrr47 + chr2L 10519636 intergenic Lrr47 + chr2L 10519783 intergenic not near genes chr2L_8_10515001 chr2L_10515001 RAL-892 268 chr2L 10540854 10540870 chr2L 10540951 10540968 5 98 5.0 3.0 4.0 1.0 114 chr2L 10540854 intergenic not near genes chr2L 10540911 intergenic not near genes chr2L 10540968 intergenic not near genes chr2L_5_10540001 chr2L_10540001 RAL-892 269 chr2L 10563907 10563948 chr2L 10564011 10564041 10 96 2.5 3.0 2.8 2.6 134 chr2L 10563907 intron Trim9 + chr2L 10563974 intron Trim9 + chr2L 10564041 intron Trim9 + chr2L_10_10560001 chr2L_10560001 RAL-892 270 chr2L 10574549 10574599 chr2L 10574666 10574716 13 117 2.0 4.5 3.2 3.1 167 chr2L 10574549 intron Trim9 + chr2L 10574632 intron Trim9 + chr2L 10574716 intron Trim9 + chr2L_13_10570001 chr2L_10570001 RAL-892 271 chr2L 10586495 10586529 chr2L 10586597 10586631 8 100 3.0 1.5 2.2 2.5 136 chr2L 10586495 intron Trim9 + chr2L 10586563 intron Trim9 + chr2L 10586631 intron Trim9 + chr2L_8_10585001 chr2L_10585001 RAL-892 272 chr2L 10592821 10592871 chr2L 10600502 10600553 opus 11 7682 1.0 2.0 1.5 4.4 7732 chr2L 10592821 intron Trim9 + chr2L 10596687 intron Trim9 + chr2L 10600553 intron Trim9 + chr2L_11_10595001 chr2L_10595001 RAL-892 273 chr2L 10604176 10604219 chr2L 10604280 10604321 10 101 6.5 0.5 3.5 2.2 145 chr2L 10604176 intron Trim9 + chr2L 10604248 intron Trim9 + chr2L 10604321 intron Trim9 + chr2L_10_10600001 chr2L_10600001 RAL-892 274 chr2L 10612800 10612840 chr2L 10612897 10612935 8 92 3.0 3.0 3.0 2.0 135 chr2L 10612800 intron Trim9 + chr2L 10612868 intron Trim9 + chr2L 10612935 intron Trim9 + chr2L_8_10610001 chr2L_10610001 RAL-892 275 chr2L 10683427 10683479 chr2L 10683526 10683578 14 98 1.5 0.0 0.8 7.8 151 chr2L 10683427 3` UTR CG7299 - chr2L 10683502 3` UTR CG7299 - chr2L 10683578 3` UTR CG7299 - chr2L_14_10680001 chr2L_10680001 RAL-892 276 chr2L 10688521 10688574 chr2L 10688617 10688670 14 96 2.0 4.0 3.0 3.5 149 chr2L 10688521 intergenic CG7294 - chr2L 10688596 intergenic CG7294 - chr2L 10688670 intergenic CG7294 - chr2L_14_10685001 chr2L_10685001 RAL-892 277 chr2L 10791855 10791881 chr2L 10791940 10791951 5 86 1.5 6.0 3.8 1.0 96 chr2L 10791855 intron CG31869 - chr2L 10791903 intron CG31869 - chr2L 10791951 intron CG31869 - chr2L_5_10790001 chr2L_10790001 RAL-892 278 chr2L 10803752 10803807 chr2L 10803857 10803913 15 106 1.5 2.0 1.8 5.4 161 chr2L 10803752 intergenic not near genes chr2L 10803832 intergenic Nos - chr2L 10803913 intergenic Nos - chr2L_15_10800001 chr2L_10800001 RAL-892 279 chr2L 10862847 10862866 chr2L 10864471 10864473 Rt1c 6 1622 3.5 11.0 7.2 0.7 1626 chr2L 10862847 3` UTR CR43807 - chr2L 10863660 intron CR43807 - chr2L 10864473 3` UTR CR43807 - chr2L_6_10860001 chr2L_10860001 RAL-892 280 chr2L 10876549 10876574 chr2L 10883631 10883655 297 5 7079 3.0 3.5 3.2 1.2 7106 chr2L 10876549 intergenic not near genes chr2L 10880102 intergenic not near genes chr2L 10883655 intergenic not near genes chr2L_5_10880001 chr2L_10880001 RAL-892 281 chr2L 10884303 10884324 chr2L 10884836 10884873 5 546 9.5 1.5 5.5 0.8 570 chr2L 10884303 intergenic not near genes chr2L 10884588 intergenic not near genes chr2L 10884873 intergenic not near genes chr2L_5_10880001 chr2L_10880001 RAL-892 282 chr2L 10946939 10946972 chr2L 10956167 10956207 roo 9 9232 2.5 4.5 3.5 2.0 9268 chr2L 10946939 intron dpr2 - chr2L 10951573 intron dpr2 - chr2L 10956207 intron dpr2 - chr2L_9_10950001 chr2L_10950001 RAL-892 283 chr2L 11339720 11339741 chr2L 11339817 11339830 6 95 5.0 0.5 2.8 1.6 110 chr2L 11339720 intergenic not near genes chr2L 11339775 intergenic not near genes chr2L 11339830 intergenic not near genes chr2L_6_11335001 chr2L_11335001 RAL-892 284 chr2L 11360418 11360457 chr2L 11360524 11360563 10 105 4.0 2.5 3.2 2.4 145 chr2L 11360418 intron salr + chr2L 11360490 intron salr + chr2L 11360563 intron salr + chr2L_10_11360001 chr2L_11360001 RAL-892 285 chr2L 11380600 11380635 chr2L 11380697 11380732 4 97 2.0 5.0 3.5 0.9 132 chr2L 11380600 intergenic not near genes chr2L 11380666 intergenic not near genes chr2L 11380732 intergenic not near genes chr2L_4_11380001 chr2L_11380001 RAL-892 286 chr2L 11404765 11404811 chr2L 11404861 11404907 8 96 0.0 2.5 1.2 3.6 142 chr2L 11404765 intergenic not near genes chr2L 11404836 intergenic not near genes chr2L 11404907 intergenic not near genes chr2L_8_11400001 chr2L_11400001 RAL-892 287 chr2L 11418635 11418679 chr2L 11418734 11418774 14 97 2.5 0.5 1.5 5.6 139 chr2L 11418635 intergenic not near genes chr2L 11418704 intergenic not near genes chr2L 11418774 intergenic not near genes chr2L_14_11415001 chr2L_11415001 RAL-892 288 chr2L 11450106 11450156 chr2L 11450212 11450258 8 101 0.0 3.0 1.5 3.2 152 chr2L 11450106 intergenic not near genes chr2L 11450182 intergenic not near genes chr2L 11450258 intergenic not near genes chr2L_8_11450001 chr2L_11450001 RAL-892 289 chr2L 11537736 11537785 chr2L 11537873 11537922 12 137 2.5 4.0 3.2 2.9 186 chr2L 11537736 intergenic not near genes chr2L 11537829 intergenic not near genes chr2L 11537922 intergenic not near genes chr2L_12_11535001 chr2L_11535001 RAL-892 290 chr2L 11540569 11540601 chr2L 11547994 11548023 Tabor 6 7424 2.5 2.5 2.5 1.7 7454 chr2L 11540569 intergenic not near genes chr2L 11544296 intergenic not near genes chr2L 11548023 intergenic not near genes chr2L_6_11540001 chr2L_11540001 RAL-892 291 chr2L 11563621 11563663 chr2L 11568840 11568887 copia 7 5223 2.5 6.5 4.5 1.3 5266 chr2L 11563621 intergenic not near genes chr2L 11566254 intergenic not near genes chr2L 11568887 intergenic not near genes chr2L_7_11565001 chr2L_11565001 RAL-892 292 chr2L 11612646 11612697 chr2L 11612754 11612805 18 105 4.5 4.0 4.2 3.5 159 chr2L 11612646 intron kek2 + chr2L 11612726 intron kek2 + chr2L 11612805 intron kek2 + chr2L_18_11610001 chr2L_11610001 RAL-892 293 chr2L 11676309 11676349 chr2L 11676417 11676456 6 108 0.0 0.0 0.0 6.0 147 chr2L 11676309 intergenic not near genes chr2L 11676382 intergenic not near genes chr2L 11676456 intergenic not near genes chr2L_6_11675001 chr2L_11675001 RAL-892 294 chr2L 11704629 11704648 chr2L 11704711 11704733 5 87 5.0 3.0 4.0 1.0 104 chr2L 11704629 intergenic not near genes chr2L 11704681 intergenic not near genes chr2L 11704733 intergenic not near genes chr2L_5_11700001 chr2L_11700001 RAL-892 295 chr2L 11713486 11713535 chr2L 11720973 11721023 blood 11 7484 2.5 3.5 3.0 2.8 7537 chr2L 11713486 intergenic not near genes chr2L 11717254 intergenic not near genes chr2L 11721023 intergenic CR44143 + chr2L_11_11715001 chr2L_11715001 RAL-892 296 chr2L 11750357 11750410 chr2L 11750798 11750851 21 439 3.0 4.0 3.5 4.7 494 chr2L 11750357 intergenic not near genes chr2L 11750604 intergenic not near genes chr2L 11750851 intergenic not near genes chr2L_21_11750001 chr2L_11750001 RAL-892 297 chr2L 11752847 11752892 chr2L 11753157 11753202 13 309 2.0 4.5 3.2 3.1 355 chr2L 11752847 intergenic CG42470 - chr2L 11753024 3` UTR CG42470 - chr2L 11753202 exon CG42470 - chr2L_13_11750001 chr2L_11750001 RAL-892 298 chr2L 11770581 11770599 chr2L 11770688 11770698 8 106 12.0 3.0 7.5 0.9 117 chr2L 11770581 intergenic not near genes chr2L 11770640 intergenic not near genes chr2L 11770698 intergenic not near genes chr2L_8_11770001 chr2L_11770001 RAL-892 299 chr2L 11823586 11823612 chr2L 11823683 11823710 6 98 0.0 2.5 1.2 2.7 124 chr2L 11823586 intron Pde1c - chr2L 11823648 intron Pde1c - chr2L 11823710 intron Pde1c - chr2L_6_11820001 chr2L_11820001 RAL-892 300 chr2L 11825686 11825692 chr2L 11825785 11825791 4 99 11.0 0.0 5.5 0.6 105 chr2L 11825686 intron Pde1c - chr2L 11825738 intron Pde1c - chr2L 11825791 intron Pde1c - chr2L_4_11825001 chr2L_11825001 RAL-892 301 chr2L 11828400 11828445 chr2L 11828514 11828559 10 114 1.5 1.5 1.5 4.0 159 chr2L 11828400 intron,intron Pde1c -,esc - chr2L 11828480 intron,intron Pde1c -,esc - chr2L 11828559 intron,intron Pde1c -,esc - chr2L_10_11825001 chr2L_11825001 RAL-892 302 chr2L 11841354 11841394 chr2L 11841452 11841492 9 98 6.5 5.0 5.8 1.3 138 chr2L 11841354 intron Pde1c - chr2L 11841423 intron Pde1c - chr2L 11841492 intron Pde1c - chr2L_9_11840001 chr2L_11840001 RAL-892 303 chr2L 11854651 11854660 chr2L 11854837 11854846 5 185 6.0 5.5 5.8 0.7 195 chr2L 11854651 intron Pde1c - chr2L 11854748 intron Pde1c - chr2L 11854846 intron Pde1c - chr2L_5_11850001 chr2L_11850001 RAL-892 304 chr2L 11854661 11854702 chr2L 11854835 11854888 6 180 1.0 4.5 2.8 1.6 227 chr2L 11854661 intron Pde1c - chr2L 11854774 intron Pde1c - chr2L 11854888 intron Pde1c - chr2L_6_11850001 chr2L_11850001 RAL-892 305 chr2L 11856295 11856349 chr2L 11856402 11856455 5 107 0.0 2.0 1.0 2.5 160 chr2L 11856295 intron Pde1c - chr2L 11856375 intron Pde1c - chr2L 11856455 intron Pde1c - chr2L_5_11855001 chr2L_11855001 RAL-892 306 chr2L 11941702 11941748 chr2L 11941838 11941884 8 136 3.5 3.0 3.2 1.9 182 chr2L 11941702 intergenic not near genes chr2L 11941793 intergenic not near genes chr2L 11941884 intergenic not near genes chr2L_8_11940001 chr2L_11940001 RAL-892 307 chr2L 11951950 11951991 chr2L 11952058 11952099 14 108 6.0 3.5 4.8 2.4 149 chr2L 11951950 intergenic CR43314 - chr2L 11952024 intergenic CR43314 - chr2L 11952099 intergenic CR43314 - chr2L_14_11950001 chr2L_11950001 RAL-892 308 chr2L 12031378 12031419 chr2L 12031479 12031520 19 101 2.0 5.0 3.5 4.2 142 chr2L 12031378 intron dmGlut + chr2L 12031449 intron dmGlut + chr2L 12031520 intron dmGlut + chr2L_19_12030001 chr2L_12030001 RAL-892 309 chr2L 12058172 12058209 chr2L 12058275 12058312 6 103 1.0 2.5 1.8 2.1 140 chr2L 12058172 exon,3` UTR CG34164 +,RpL7-like + chr2L 12058242 3` UTR,3` UTR CG34164 +,RpL7-like + chr2L 12058312 3` UTR Rab3-GAP - chr2L_6_12055001 chr2L_12055001 RAL-892 310 chr2L 12067309 12067356 chr2L 12074381 12074428 297 18 7071 5.5 3.0 4.2 3.5 7119 chr2L 12067309 intergenic not near genes chr2L 12070868 intergenic not near genes chr2L 12074428 intergenic not near genes chr2L_18_12070001 chr2L_12070001 RAL-892 311 chr2L 12131448 12131497 chr2L 12131564 12131613 12 116 3.5 6.0 4.8 2.1 165 chr2L 12131448 intron rho-6 - chr2L 12131530 intron rho-6 - chr2L 12131613 intron rho-6 - chr2L_12_12130001 chr2L_12130001 RAL-892 312 chr2L 12132706 12132747 chr2L 12132812 12132853 16 106 0.0 2.5 1.2 7.3 147 chr2L 12132706 intron rho-6 - chr2L 12132780 intron rho-6 - chr2L 12132853 intron rho-6 - chr2L_16_12130001 chr2L_12130001 RAL-892 313 chr2L 12148500 12148512 chr2L 12148799 12148815 4 304 1.0 6.0 3.5 0.9 315 chr2L 12148500 intron CG31760 + chr2L 12148658 intron CG31760 + chr2L 12148815 intron CG31760 + chr2L_4_12145001 chr2L_12145001 RAL-892 314 chr2L 12175834 12175847 chr2L 12175936 12175949 5 102 2.5 0.0 1.2 2.3 115 chr2L 12175834 intron,intron aret +,atilla - chr2L 12175892 intron,intron aret +,atilla - chr2L 12175949 intron,intron aret +,atilla - chr2L_5_12175001 chr2L_12175001 RAL-892 315 chr2L 12194883 12194902 chr2L 17708038 17708050 4 5513154 6.0 12.5 9.2 0.4 5513167 chr2L 12194883 intron aret + chr2L 14951466 intron CG42313 - chr2L 17708050 exon CadN - chr2L_4_14950001 chr2L_14950001 RAL-892 316 chr2L 12203541 12203583 chr2L 12203640 12203682 14 99 5.0 4.5 4.8 2.4 141 chr2L 12203541 intron aret + chr2L 12203612 intron aret + chr2L 12203682 intron aret + chr2L_14_12200001 chr2L_12200001 RAL-892 317 chr2L 12224894 12224897 chr2L 12224977 12224993 4 92 0.0 10.0 5.0 0.7 99 chr2L 12224894 intron aret + chr2L 12224944 intron aret + chr2L 12224993 intron aret + chr2L_4_12220001 chr2L_12220001 RAL-892 318 chr2L 12234014 12234064 chr2L 12234129 12234179 11 113 2.5 2.5 2.5 3.1 165 chr2L 12234014 intron aret + chr2L 12234096 intron aret + chr2L 12234179 intron aret + chr2L_11_12230001 chr2L_12230001 RAL-892 319 chr2L 12254009 12254035 chr2L 12254121 12254147 9 112 4.0 0.0 2.0 3.0 138 chr2L 12254009 intron aret + chr2L 12254078 intron aret + chr2L 12254147 intron aret + chr2L_9_12250001 chr2L_12250001 RAL-892 320 chr2L 12262648 12262680 chr2L 12262933 12262964 10 285 4.0 0.5 2.2 3.1 316 chr2L 12262648 intron aret + chr2L 12262806 intron aret + chr2L 12262964 intron aret + chr2L_10_12260001 chr2L_12260001 RAL-892 321 chr2L 12272162 12272193 chr2L 12272258 12272289 12 96 0.0 8.5 4.2 2.3 127 chr2L 12272162 intron aret + chr2L 12272226 intron aret + chr2L 12272289 intron aret + chr2L_12_12270001 chr2L_12270001 RAL-892 322 chr2L 12363167 12363203 chr2L 12363275 12363293 10 106 0.0 3.0 1.5 4.0 126 chr2L 12363167 intron bru-2 + chr2L 12363230 intron bru-2 + chr2L 12363293 intron bru-2 + chr2L_10_12360001 chr2L_12360001 RAL-892 323 chr2L 12366846 12366890 chr2L 12366950 12366996 10 106 3.0 2.0 2.5 2.9 150 chr2L 12366846 intron bru-2 + chr2L 12366921 intron bru-2 + chr2L 12366996 intron bru-2 + chr2L_10_12365001 chr2L_12365001 RAL-892 324 chr2L 12377366 12377401 chr2L 12377462 12377512 14 109 4.5 4.5 4.5 2.5 146 chr2L 12377366 intron bru-2 + chr2L 12377439 intron bru-2 + chr2L 12377512 intron bru-2 + chr2L_14_12375001 chr2L_12375001 RAL-892 325 chr2L 12410988 12411038 chr2L 12411087 12411137 15 99 1.5 1.5 1.5 6.0 149 chr2L 12410988 intron vir-1 - chr2L 12411062 intron vir-1 - chr2L 12411137 intron vir-1 - chr2L_15_12410001 chr2L_12410001 RAL-892 326 chr2L 12424350 12424375 chr2L 12424446 12424470 6 96 0.0 3.5 1.8 2.1 120 chr2L 12424350 intergenic not near genes chr2L 12424410 intergenic CG6405 + chr2L 12424470 intergenic CG6405 + chr2L_6_12420001 chr2L_12420001 RAL-892 327 chr2L 12426133 12426162 chr2L 12426221 12426251 6 89 3.5 2.5 3.0 1.5 118 chr2L 12426133 exon CG6405 + chr2L 12426192 exon CG6405 + chr2L 12426251 exon CG6405 + chr2L_6_12425001 chr2L_12425001 RAL-892 328 chr2L 12466213 12466242 chr2L 12466319 12466348 7 106 0.0 1.0 0.5 4.7 135 chr2L 12466213 intron bun - chr2L 12466280 intron bun - chr2L 12466348 intron bun - chr2L_7_12465001 chr2L_12465001 RAL-892 329 chr2L 12487868 12487914 chr2L 12487969 12488015 19 99 4.5 6.0 5.2 3.1 147 chr2L 12487868 intron bun - chr2L 12487942 intron bun - chr2L 12488015 intron bun - chr2L_19_12485001 chr2L_12485001 RAL-892 330 chr2L 12523308 12523322 chr2L 12523402 12523421 4 98 10.0 8.5 9.2 0.4 113 chr2L 12523308 intron bun - chr2L 12523364 intron bun - chr2L 12523421 intron bun - chr2L_4_12520001 chr2L_12520001 RAL-892 331 chr2L 12529221 12529259 chr2L 12529393 12529431 9 172 3.0 7.0 5.0 1.5 210 chr2L 12529221 intron bun - chr2L 12529326 intron bun - chr2L 12529431 intron bun - chr2L_9_12525001 chr2L_12525001 RAL-892 332 chr2L 12532153 12532176 chr2L 12532250 12532273 10 97 2.0 3.5 2.8 2.6 120 chr2L 12532153 intron bun - chr2L 12532213 intron bun - chr2L 12532273 intron bun - chr2L_10_12530001 chr2L_12530001 RAL-892 333 chr2L 12558310 12558352 chr2L 12565459 12565501 HMS-Beagle 11 7149 3.5 8.5 6.0 1.6 7191 chr2L 12558310 intergenic not near genes chr2L 12561906 intergenic not near genes chr2L 12565501 intergenic not near genes chr2L_11_12560001 chr2L_12560001 RAL-892 334 chr2L 12653769 12653807 chr2L 12653906 12653944 14 137 3.5 3.0 3.2 3.3 175 chr2L 12653769 intergenic not near genes chr2L 12653856 intergenic not near genes chr2L 12653944 intergenic not near genes chr2L_14_12650001 chr2L_12650001 RAL-892 335 chr2L 12684200 12684248 chr2L 12684301 12684349 22 101 3.5 2.0 2.8 5.8 149 chr2L 12684200 intron pdm2 + chr2L 12684274 intron pdm2 + chr2L 12684349 intron pdm2 + chr2L_22_12680001 chr2L_12680001 RAL-892 336 chr2L 12728901 12728944 chr2L 12729161 12729204 pogo 13 260 5.0 1.5 3.2 3.1 303 chr2L 12728901 intron MRP + chr2L 12729052 intron MRP + chr2L 12729204 exon MRP + chr2L_13_12725001 chr2L_12725001 RAL-892 337 chr2L 12731038 12731088 chr2L 12735825 12735863 F-element 15 4786 4.0 3.0 3.5 3.3 4825 chr2L 12731038 intron MRP + chr2L 12733450 intron MRP + chr2L 12735863 intron MRP + chr2L_15_12730001 chr2L_12730001 RAL-892 338 chr2L 12739156 12739203 chr2L 12743956 12743989 Doc 17 4799 3.0 4.5 3.8 3.5 4833 chr2L 12739156 exon MRP + chr2L 12741572 intron MRP + chr2L 12743989 exon MRP + chr2L_17_12740001 chr2L_12740001 RAL-892 339 chr2L 12751296 12751328 chr2L 12751393 12751431 7 101 1.0 1.5 1.2 3.2 135 chr2L 12751296 intergenic not near genes chr2L 12751364 intergenic not near genes chr2L 12751431 intergenic not near genes chr2L_7_12750001 chr2L_12750001 RAL-892 340 chr2L 12759192 12759237 chr2L 12759307 12759335 4 111 0.5 5.5 3.0 1.0 143 chr2L 12759192 intergenic not near genes chr2L 12759264 intergenic not near genes chr2L 12759335 intergenic not near genes chr2L_4_12755001 chr2L_12755001 RAL-892 341 chr2L 12763806 12763869 chr2L 12764038 12764089 BS 4 226 0.0 0.0 0.0 4.0 283 chr2L 12763806 intergenic not near genes chr2L 12763948 intergenic not near genes chr2L 12764089 intergenic not near genes chr2L_4_12760001 chr2L_12760001 RAL-892 342 chr2L 12781778 12781812 chr2L 12789248 12789281 Quasimodo 10 7468 5.5 3.0 4.2 1.9 7503 chr2L 12781778 intergenic not near genes chr2L 12785530 intergenic not near genes chr2L 12789281 intergenic not near genes chr2L_10_12785001 chr2L_12785001 RAL-892 343 chr2L 12791607 12791634 chr2L 12795280 12795296 F-element 12 3687 2.5 4.5 3.5 2.7 3689 chr2L 12791607 intergenic not near genes chr2L 12793452 intergenic not near genes chr2L 12795296 intergenic not near genes chr2L_12_12790001 chr2L_12790001 RAL-892 344 chr2L 12861685 12861728 chr2L 12863162 12863179 hobo 9 1479 2.5 3.0 2.8 2.4 1494 chr2L 12861685 intergenic not near genes chr2L 12862432 intergenic not near genes chr2L 12863179 intergenic not near genes chr2L_9_12860001 chr2L_12860001 RAL-892 345 chr2L 12933830 12933883 chr2L 12941317 12941362 blood 17 7485 4.5 2.5 3.5 3.8 7532 chr2L 12933830 intergenic not near genes chr2L 12937596 intergenic not near genes chr2L 12941362 intergenic not near genes chr2L_17_12935001 chr2L_12935001 RAL-892 346 chr2L 12989051 12989077 chr2L 12989134 12989177 4 98 3.0 2.0 2.5 1.1 126 chr2L 12989051 intergenic not near genes chr2L 12989114 intergenic not near genes chr2L 12989177 intergenic not near genes chr2L_4_12985001 chr2L_12985001 RAL-892 347 chr2L 12990503 12990535 chr2L 12990604 12990636 7 101 3.0 4.0 3.5 1.6 133 chr2L 12990503 intergenic not near genes chr2L 12990570 intergenic not near genes chr2L 12990636 intergenic not near genes chr2L_7_12990001 chr2L_12990001 RAL-892 348 chr2L 13033835 13033865 chr2L 13033941 13033973 9 107 1.0 6.0 3.5 2.0 138 chr2L 13033835 intron CG9932 - chr2L 13033904 intron CG9932 - chr2L 13033973 intron CG9932 - chr2L_9_13030001 chr2L_13030001 RAL-892 349 chr2L 13036243 13036266 chr2L 13036484 13036528 X-element 12 260 4.5 2.5 3.5 2.7 285 chr2L 13036243 intron CG9932 - chr2L 13036386 intron CG9932 - chr2L 13036528 intron CG9932 - chr2L_12_13035001 chr2L_13035001 RAL-892 350 chr2L 13049463 13049509 chr2L 13049726 13049773 15 261 2.5 5.5 4.0 3.0 310 chr2L 13049463 intron CG9932 - chr2L 13049618 intron CG9932 - chr2L 13049773 intron CG9932 - chr2L_15_13045001 chr2L_13045001 RAL-892 351 chr2L 13077114 13077149 chr2L 13077241 13077292 11 139 1.5 4.5 3.0 2.8 178 chr2L 13077114 intergenic not near genes chr2L 13077203 intergenic not near genes chr2L 13077292 intergenic not near genes chr2L_11_13075001 chr2L_13075001 RAL-892 352 chr2L 13204313 13204327 chr2L 13204416 13204421 4 102 3.0 4.0 3.5 0.9 108 chr2L 13204313 intron Pect + chr2L 13204367 intron Pect + chr2L 13204421 intron Pect + chr2L_4_13200001 chr2L_13200001 RAL-892 353 chr2L 13245017 13245067 chr2L 13245366 13245416 13 344 4.5 7.0 5.8 1.9 399 chr2L 13245017 intergenic snRNA:U5:34A +,CR45330 + chr2L 13245216 intergenic snRNA:U5:34A +,CR45330 + chr2L 13245416 intergenic snRNA:U5:34A + chr2L_13_13245001 chr2L_13245001 RAL-892 354 chr2L 13292801 13292846 chr2L 13292906 13292951 11 104 5.5 7.0 6.2 1.5 150 chr2L 13292801 intron CG31729 + chr2L 13292876 intron CG31729 + chr2L 13292951 intron CG31729 + chr2L_11_13290001 chr2L_13290001 RAL-892 355 chr2L 13374309 13374355 chr2L 13374411 13374462 21 103 2.0 3.0 2.5 6.0 153 chr2L 13374309 5` UTR CG6565 + chr2L 13374386 5` UTR CG6565 + chr2L 13374462 5` UTR CG6565 + chr2L_21_13370001 chr2L_13370001 RAL-892 356 chr2L 13405629 13405677 chr2L 13410446 13410489 Doc 18 4815 4.0 5.0 4.5 3.3 4860 chr2L 13405629 exon CG7110 + chr2L 13408059 intron CG7110 + chr2L 13410489 intron CG7110 + chr2L_18_13405001 chr2L_13405001 RAL-892 357 chr2L 13422490 13422502 chr2L 13422589 13422601 5 99 0.0 11.0 5.5 0.8 111 chr2L 13422490 intron CG42784 + chr2L 13422546 intron CG42784 + chr2L 13422601 intron CG42784 + chr2L_5_13420001 chr2L_13420001 RAL-892 358 chr2L 13449466 13449496 chr2L 13456922 13456952 Quasimodo 12 7456 1.5 10.0 5.8 1.8 7486 chr2L 13449466 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453209 intron CG42784 + chr2L 13456952 intron CG42784 + chr2L_12_13450001 chr2L_13450001 RAL-892 359 chr2L 13461993 13462037 chr2L 13462146 13462191 11 153 2.0 4.5 3.2 2.6 198 chr2L 13461993 intron CG42784 + chr2L 13462092 intron CG42784 + chr2L 13462191 intron CG42784 + chr2L_11_13460001 chr2L_13460001 RAL-892 360 chr2L 13481437 13481463 chr2L 13482064 13482090 jockey 11 627 6.0 3.0 4.5 2.0 653 chr2L 13481437 intron CG42784 + chr2L 13481764 intron CG42784 + chr2L 13482090 intron CG42784 + chr2L_11_13480001 chr2L_13480001 RAL-892 361 chr2L 13560392 13560415 chr2L 13565233 13565256 F-element 12 4841 7.0 7.5 7.2 1.5 4864 chr2L 13560392 intron kuz + chr2L 13562824 intron kuz + chr2L 13565256 intron kuz + chr2L_12_13560001 chr2L_13560001 RAL-892 362 chr2L 13725754 13725768 chr2L 13725861 13725873 5 107 0.0 7.0 3.5 1.1 119 chr2L 13725754 intergenic not near genes chr2L 13725814 intergenic not near genes chr2L 13725873 intergenic not near genes chr2L_5_13725001 chr2L_13725001 RAL-892 363 chr2L 13730296 13730317 chr2L 13730436 13730445 4 138 3.0 7.0 5.0 0.7 149 chr2L 13730296 intergenic not near genes chr2L 13730370 intergenic not near genes chr2L 13730445 intergenic not near genes chr2L_4_13730001 chr2L_13730001 RAL-892 364 chr2L 13742115 13742164 chr2L 13742227 13742257 7 102 4.0 0.5 2.2 2.2 142 chr2L 13742115 intergenic not near genes chr2L 13742186 intergenic not near genes chr2L 13742257 intergenic not near genes chr2L_7_13740001 chr2L_13740001 RAL-892 365 chr2L 13749198 13749206 chr2L 13749301 13749309 5 103 0.0 0.5 0.2 4.2 111 chr2L 13749198 intron,intron CR44846 +,TM9SF4 + chr2L 13749254 intron,intron CR44846 +,TM9SF4 + chr2L 13749309 intron,intron CR44846 +,TM9SF4 + chr2L_5_13745001 chr2L_13745001 RAL-892 366 chr2L 13853068 13853108 chr2L 13862238 13862278 roo 19 9169 7.5 0.0 3.8 4.0 9210 chr2L 13853068 intron CenG1A + chr2L 13857673 intron CenG1A + chr2L 13862278 intron CenG1A + chr2L_19_13855001 chr2L_13855001 RAL-892 367 chr2L 13988260 13988305 chr2L 13988367 13988412 9 106 4.5 4.0 4.2 1.7 152 chr2L 13988260 intron rk - chr2L 13988336 intron rk - chr2L 13988412 intron rk - chr2L_9_13985001 chr2L_13985001 RAL-892 368 chr2L 14056787 14056839 chr2L 14056892 14056945 18 105 5.0 5.5 5.2 2.9 158 chr2L 14056787 intron nAChRalpha5 + chr2L 14056866 intron nAChRalpha5 + chr2L 14056945 intron nAChRalpha5 + chr2L_18_14055001 chr2L_14055001 RAL-892 369 chr2L 14102841 14102858 chr2L 14102942 14102959 4 100 0.0 0.0 0.0 4.0 118 chr2L 14102841 intergenic not near genes chr2L 14102900 intergenic not near genes chr2L 14102959 intergenic not near genes chr2L_4_14100001 chr2L_14100001 RAL-892 370 chr2L 14374764 14374799 chr2L 14374875 14374910 13 111 6.0 6.0 6.0 1.9 146 chr2L 14374764 intergenic not near genes chr2L 14374837 intergenic not near genes chr2L 14374910 intergenic not near genes chr2L_13_14370001 chr2L_14370001 RAL-892 371 chr2L 14465390 14465436 chr2L 14465553 14465599 14 162 4.0 2.5 3.2 3.3 209 chr2L 14465390 intergenic not near genes chr2L 14465494 intergenic not near genes chr2L 14465599 intergenic not near genes chr2L_14_14465001 chr2L_14465001 RAL-892 372 chr2L 14465566 14465618 chr2L 14469049 14469101 hopper2 20 3483 2.5 0.0 1.2 9.1 3535 chr2L 14465566 intergenic not near genes chr2L 14467334 intergenic not near genes chr2L 14469101 intergenic not near genes chr2L_20_14465001 chr2L_14465001 RAL-892 373 chr2L 14472023 14472054 chr2L 14472119 14472150 6 96 3.5 2.0 2.8 1.6 127 chr2L 14472023 intergenic not near genes chr2L 14472086 intergenic not near genes chr2L 14472150 intergenic not near genes chr2L_6_14470001 chr2L_14470001 RAL-892 374 chr2L 14539484 14539502 chr2L 14539583 14539601 4 99 6.0 5.0 5.5 0.6 117 chr2L 14539484 intergenic not near genes chr2L 14539542 intergenic not near genes chr2L 14539601 intergenic not near genes chr2L_4_14535001 chr2L_14535001 RAL-892 375 chr2L 14557251 14557271 chr2L 14557344 14557357 6 101 4.5 3.0 3.8 1.2 106 chr2L 14557251 intergenic not near genes chr2L 14557304 intergenic not near genes chr2L 14557357 intergenic not near genes chr2L_6_14555001 chr2L_14555001 RAL-892 376 chr2L 14588366 14588418 chr2L 14588540 14588564 12 171 5.0 1.5 3.2 2.9 198 chr2L 14588366 intergenic CG42680 - chr2L 14588465 intergenic CG42680 - chr2L 14588564 intergenic CG42680 - chr2L_12_14585001 chr2L_14585001 RAL-892 377 chr2L 14601967 14601999 chr2L 14602061 14602103 16 100 6.0 2.5 4.2 3.1 136 chr2L 14601967 exon osp - chr2L 14602035 intron osp - chr2L 14602103 intron osp - chr2L_16_14600001 chr2L_14600001 RAL-892 378 chr2L 14642559 14642599 chr2L 14651742 14651782 roo 12 9183 5.5 5.0 5.2 1.9 9223 chr2L 14642559 intron osp - chr2L 14647170 intron osp - chr2L 14651782 intron osp - chr2L_12_14645001 chr2L_14645001 RAL-892 379 chr2L 14768913 14768958 chr2L 14769011 14769056 19 98 0.5 5.5 3.0 4.8 143 chr2L 14768913 intergenic not near genes chr2L 14768984 intergenic not near genes chr2L 14769056 intergenic not near genes chr2L_19_14765001 chr2L_14765001 RAL-892 380 chr2L 14803858 14803913 chr2L 14809081 14809102 copia 16 5219 2.0 2.5 2.2 5.0 5244 chr2L 14803858 intergenic not near genes chr2L 14806480 intergenic not near genes chr2L 14809102 intergenic not near genes chr2L_16_14805001 chr2L_14805001 RAL-892 381 chr2L 14923094 14923134 chr2L 14923194 14923234 15 100 5.5 4.5 5.0 2.5 140 chr2L 14923094 intron CG42313 - chr2L 14923164 intron CG42313 - chr2L 14923234 intron CG42313 - chr2L_15_14920001 chr2L_14920001 RAL-892 382 chr2L 14984364 14984390 chr2L 14991986 14992012 opus 6 7620 1.0 4.5 2.8 1.6 7648 chr2L 14984364 intron mol - chr2L 14988188 intron mol - chr2L 14992012 intron mol - chr2L_6_14985001 chr2L_14985001 RAL-892 383 chr2L 15013132 15013180 chr2L 15013256 15013309 12 126 1.5 3.5 2.5 3.4 177 chr2L 15013132 intergenic CR43856 - chr2L 15013220 intergenic not near genes chr2L 15013309 intergenic not near genes chr2L_12_15010001 chr2L_15010001 RAL-892 384 chr2L 15028937 15028982 chr2L 15029056 15029085 7 116 5.5 6.5 6.0 1.0 148 chr2L 15028937 intron,exon GABA-B-R1 +,CG33310 + chr2L 15029011 intron,exon GABA-B-R1 +,CG33310 + chr2L 15029085 intron,exon GABA-B-R1 +,CG33310 + chr2L_7_15025001 chr2L_15025001 RAL-892 385 chr2L 15044536 15044583 chr2L 15044785 15044832 11 244 3.5 4.5 4.0 2.2 296 chr2L 15044536 intergenic ck - chr2L 15044684 intergenic ck - chr2L 15044832 intergenic ck - chr2L_11_15040001 chr2L_15040001 RAL-892 386 chr2L 15061754 15061807 chr2L 15064049 15064102 23 2299 38.0 42.5 40.2 0.6 2348 chr2L 15061754 intron vas + chr2L 15062928 intron vas + chr2L 15064102 intron,3` UTR vas +,vig - chr2L_23_15060001 chr2L_15060001 RAL-892 387 chr2L 15077373 15077424 chr2L 15077483 15077534 9 106 4.0 5.0 4.5 1.6 161 chr2L 15077373 intron CG15270 + chr2L 15077454 intron CG15270 + chr2L 15077534 intron CG15270 + chr2L_9_15075001 chr2L_15075001 RAL-892 388 chr2L 15079091 15079127 chr2L 15079201 15079231 7 98 1.0 8.5 4.8 1.2 140 chr2L 15079091 intron CG15270 + chr2L 15079161 intron CG15270 + chr2L 15079231 intron CG15270 + chr2L_7_15075001 chr2L_15075001 RAL-892 389 chr2L 15098524 15098542 chr2L 15098620 15098641 5 96 5.0 3.5 4.2 1.0 117 chr2L 15098524 intergenic not near genes chr2L 15098582 intergenic not near genes chr2L 15098641 intergenic not near genes chr2L_5_15095001 chr2L_15095001 RAL-892 390 chr2L 15103839 15103863 chr2L 15103956 15103980 5 117 9.5 3.5 6.5 0.7 141 chr2L 15103839 intergenic not near genes chr2L 15103910 intergenic not near genes chr2L 15103980 intergenic not near genes chr2L_5_15100001 chr2L_15100001 RAL-892 391 chr2L 15122599 15122795 chr2L 15122703 15122895 13 100 4.5 7.0 5.8 1.9 296 chr2L 15122599 intergenic not near genes chr2L 15122747 intergenic not near genes chr2L 15122895 intergenic not near genes chr2L_13_15120001 chr2L_15120001 RAL-892 392 chr2L 15142013 15142061 chr2L 15142112 15142160 15 99 5.0 4.0 4.5 2.7 147 chr2L 15142013 intergenic not near genes chr2L 15142086 intergenic not near genes chr2L 15142160 intergenic not near genes chr2L_15_15140001 chr2L_15140001 RAL-892 393 chr2L 15161230 15161266 chr2L 15161386 15161422 11 156 3.0 1.5 2.2 3.4 192 chr2L 15161230 intergenic CR44770 + chr2L 15161326 intergenic CR44770 + chr2L 15161422 intergenic CR44770 +,CG4168 - chr2L_11_15160001 chr2L_15160001 RAL-892 394 chr2L 15252965 15253007 chr2L 15253064 15253106 10 99 3.0 6.5 4.8 1.7 141 chr2L 15252965 intron dao + chr2L 15253036 intron dao + chr2L 15253106 intron dao + chr2L_10_15250001 chr2L_15250001 RAL-892 395 chr2L 15427262 15427313 chr2L 15427468 15427519 14 206 4.0 0.0 2.0 4.7 257 chr2L 15427262 intergenic not near genes chr2L 15427390 intergenic not near genes chr2L 15427519 intergenic not near genes chr2L_14_15425001 chr2L_15425001 RAL-892 396 chr2L 15446031 15446083 chr2L 15453519 15453572 blood 10 7487 1.5 2.0 1.8 3.6 7541 chr2L 15446031 intergenic not near genes chr2L 15449802 intergenic not near genes chr2L 15453572 intergenic not near genes chr2L_10_15445001 chr2L_15445001 RAL-892 397 chr2L 15476382 15476420 chr2L 15476561 15476599 16 179 1.0 3.5 2.2 5.0 217 chr2L 15476382 intergenic sna - chr2L 15476490 intergenic sna - chr2L 15476599 3` UTR sna - chr2L_16_15475001 chr2L_15475001 RAL-892 398 chr2L 15482567 15482604 chr2L 15482723 15482760 11 155 4.0 8.0 6.0 1.6 193 chr2L 15482567 intergenic not near genes chr2L 15482664 intergenic not near genes chr2L 15482760 intergenic not near genes chr2L_11_15480001 chr2L_15480001 RAL-892 399 chr2L 15499891 15499945 chr2L 15499999 15500051 15 105 2.0 3.5 2.8 3.9 160 chr2L 15499891 intron lace + chr2L 15499971 intron lace + chr2L 15500051 intron lace + chr2L_15_15495001 chr2L_15495001 RAL-892 400 chr2L 15543167 15543197 chr2L 15543268 15543298 5 101 3.0 6.5 4.8 0.9 131 chr2L 15543167 intergenic not near genes chr2L 15543232 intergenic not near genes chr2L 15543298 intergenic not near genes chr2L_5_15540001 chr2L_15540001 RAL-892 401 chr2L 15586394 15586439 chr2L 15593466 15593511 297 14 7072 4.5 4.5 4.5 2.5 7117 chr2L 15586394 intergenic not near genes chr2L 15589952 intergenic not near genes chr2L 15593511 intergenic not near genes chr2L_14_15585001 chr2L_15585001 RAL-892 402 chr2L 15598748 15598798 chr2L 15598847 15598897 12 99 4.0 0.0 2.0 4.0 149 chr2L 15598748 intergenic not near genes chr2L 15598822 intergenic not near genes chr2L 15598897 intergenic not near genes chr2L_12_15595001 chr2L_15595001 RAL-892 403 chr2L 15628393 15628410 chr2L 15628489 15628506 5 96 0.0 3.5 1.8 1.8 113 chr2L 15628393 intergenic CG7631 + chr2L 15628450 intergenic CG7631 + chr2L 15628506 intergenic CG7631 + chr2L_5_15625001 chr2L_15625001 RAL-892 404 chr2L 15636657 15636695 chr2L 15636753 15636791 5 96 2.5 6.0 4.2 1.0 134 chr2L 15636657 intergenic not near genes chr2L 15636724 intergenic not near genes chr2L 15636791 intergenic not near genes chr2L_5_15635001 chr2L_15635001 RAL-892 405 chr2L 15734297 15734320 chr2L 15734396 15734418 5 98 0.0 8.0 4.0 1.0 121 chr2L 15734297 intron CycE - chr2L 15734358 intron CycE - chr2L 15734418 intron CycE - chr2L_5_15730001 chr2L_15730001 RAL-892 406 chr2L 15761101 15761108 chr2L 15761201 15761208 6 100 0.0 6.5 3.2 1.4 107 chr2L 15761101 intron Gli - chr2L 15761154 intron Gli - chr2L 15761208 intron Gli - chr2L_6_15760001 chr2L_15760001 RAL-892 407 chr2L 15823335 15823371 chr2L 15823431 15823459 12 95 2.5 1.5 2.0 4.0 124 chr2L 15823335 intergenic CR44601 - chr2L 15823397 intergenic CR44601 - chr2L 15823459 intergenic not near genes chr2L_12_15820001 chr2L_15820001 RAL-892 408 chr2L 15826874 15826893 chr2L 15829288 15829307 Tabor 4 2414 0.0 7.5 3.8 0.8 2433 chr2L 15826874 intergenic not near genes chr2L 15828090 intergenic not near genes chr2L 15829307 intergenic not near genes chr2L_4_15825001 chr2L_15825001 RAL-892 409 chr2L 15913144 15913173 chr2L 15913248 15913277 8 104 4.0 5.5 4.8 1.4 133 chr2L 15913144 intron beat-Ib - chr2L 15913210 intron beat-Ib - chr2L 15913277 intron beat-Ib - chr2L_8_15910001 chr2L_15910001 RAL-892 410 chr2L 15915632 15915681 chr2L 15915730 15915778 10 97 5.5 2.5 4.0 2.0 146 chr2L 15915632 intron beat-Ib - chr2L 15915705 intron beat-Ib - chr2L 15915778 intron beat-Ib - chr2L_10_15915001 chr2L_15915001 RAL-892 411 chr2L 15944116 15944173 chr2L 15944277 15944334 14 160 3.5 3.0 3.2 3.3 218 chr2L 15944116 intron beat-Ib - chr2L 15944225 intron beat-Ib - chr2L 15944334 intron beat-Ib - chr2L_14_15940001 chr2L_15940001 RAL-892 412 chr2L 15956006 15956043 chr2L 15957493 15957530 hobo 8 1487 8.5 6.0 7.2 1.0 1524 chr2L 15956006 intron beat-Ib - chr2L 15956768 intron beat-Ib - chr2L 15957530 intron beat-Ib - chr2L_8_15955001 chr2L_15955001 RAL-892 413 chr2L 15971988 15972001 chr2L 15972106 15972119 4 118 0.0 9.5 4.8 0.7 131 chr2L 15971988 intergenic not near genes chr2L 15972054 intergenic not near genes chr2L 15972119 intergenic not near genes chr2L_4_15970001 chr2L_15970001 RAL-892 414 chr2L 16001447 16001494 chr2L 16001555 16001602 11 108 0.0 3.5 1.8 3.9 155 chr2L 16001447 intron beat-Ic + chr2L 16001524 intron beat-Ic + chr2L 16001602 intron beat-Ic + chr2L_11_16000001 chr2L_16000001 RAL-892 415 chr2L 16043554 16043597 chr2L 16043659 16043702 10 104 0.5 3.0 1.8 3.6 148 chr2L 16043554 intron,intron BicC +,CG45084 + chr2L 16043628 intron,intron BicC +,CG45084 + chr2L 16043702 intron,intron BicC +,CG45084 + chr2L_10_16040001 chr2L_16040001 RAL-892 416 chr2L 16051593 16051633 chr2L 16051692 16051732 8 98 3.0 4.5 3.8 1.7 139 chr2L 16051593 intron beat-Ia + chr2L 16051662 intron beat-Ia + chr2L 16051732 intron beat-Ia + chr2L_8_16050001 chr2L_16050001 RAL-892 417 chr2L 16056139 16056155 chr2L 16056235 16056251 5 96 1.5 3.0 2.2 1.6 112 chr2L 16056139 intron beat-Ia + chr2L 16056195 intron beat-Ia + chr2L 16056251 5` UTR beat-Ia + chr2L_5_16055001 chr2L_16055001 RAL-892 418 chr2L 16062267 16062308 chr2L 16062599 16062640 17 332 3.0 4.5 3.8 3.5 373 chr2L 16062267 intron beat-Ia + chr2L 16062454 intron beat-Ia + chr2L 16062640 intron beat-Ia + chr2L_17_16060001 chr2L_16060001 RAL-892 419 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 7 145889 13.0 18.5 15.8 0.4 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_7_16140001 chr2L_16140001 RAL-892 420 chr2L 16115502 16115547 chr2L 16115598 16115637 17 96 5.5 3.0 4.2 3.3 135 chr2L 16115502 intergenic not near genes chr2L 16115570 intergenic not near genes chr2L 16115637 intergenic not near genes chr2L_17_16115001 chr2L_16115001 RAL-892 421 chr2L 16141148 16141190 chr2L 16146375 16146417 copia 12 5227 4.5 5.0 4.8 2.1 5269 chr2L 16141148 intergenic not near genes chr2L 16143782 intergenic not near genes chr2L 16146417 intergenic not near genes chr2L_12_16140001 chr2L_16140001 RAL-892 422 chr2L 16153723 16153749 chr2L 16160811 16160836 297 6 7087 6.0 4.5 5.2 1.0 7113 chr2L 16153723 intergenic not near genes chr2L 16157280 intergenic not near genes chr2L 16160836 intergenic not near genes chr2L_6_16155001 chr2L_16155001 RAL-892 423 chr2L 9084336 9084340 chr2L 16217660 16217660 5 7133321 13.5 18.5 16.0 0.3 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_5_12650001 chr2L_12650001 RAL-892 424 chr2L 15557165 15557166 chr2L 16217660 16217660 5 660494 10.0 18.5 14.2 0.3 660495 chr2L 15557165 intron kek3 + chr2L 15887412 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_5_15885001 chr2L_15885001 RAL-892 425 chr2L 16242055 16242087 chr2L 16242166 16242199 4 111 1.5 0.0 0.8 2.2 144 chr2L 16242055 5` UTR CG42818 + chr2L 16242127 exon CG42818 + chr2L 16242199 exon CG42818 + chr2L_4_16240001 chr2L_16240001 RAL-892 426 chr2L 16243351 16243368 chr2L 16243450 16243468 6 100 4.0 2.5 3.2 1.4 117 chr2L 16243351 exon CG42818 + chr2L 16243410 exon CG42818 + chr2L 16243468 exon CG42818 + chr2L_6_16240001 chr2L_16240001 RAL-892 427 chr2L 16243680 16243709 chr2L 16243783 16243811 5 101 1.5 4.0 2.8 1.3 131 chr2L 16243680 exon CG42818 + chr2L 16243746 exon CG42818 + chr2L 16243811 exon CG42818 + chr2L_5_16240001 chr2L_16240001 RAL-892 428 chr2L 16254873 16254919 chr2L 16255152 16255198 24 279 8.0 10.0 9.0 2.4 325 chr2L 16254873 intron PRL-1 - chr2L 16255036 intron PRL-1 - chr2L 16255198 intron PRL-1 - chr2L_24_16255001 chr2L_16255001 RAL-892 429 chr2L 16354563 16354577 chr2L 16354679 16354693 4 116 3.0 0.5 1.8 1.4 130 chr2L 16354563 intergenic CG4455 +,CaBP1 - chr2L 16354628 intergenic CG4455 +,CaBP1 - chr2L 16354693 intergenic CG4455 +,CaBP1 - chr2L_4_16350001 chr2L_16350001 RAL-892 430 chr2L 16387375 16387426 chr2L 16387477 16387522 13 101 1.0 7.0 4.0 2.6 147 chr2L 16387375 intergenic not near genes chr2L 16387448 intergenic not near genes chr2L 16387522 intergenic not near genes chr2L_13_16385001 chr2L_16385001 RAL-892 431 chr2L 16391786 16391832 chr2L 16391882 16391928 5 96 5.0 0.5 2.8 1.3 142 chr2L 16391786 intergenic not near genes chr2L 16391857 intergenic not near genes chr2L 16391928 intergenic not near genes chr2L_5_16390001 chr2L_16390001 RAL-892 432 chr2L 16408104 16408154 chr2L 16408230 16408276 5 124 0.0 2.0 1.0 2.5 172 chr2L 16408104 intron CG5888 - chr2L 16408190 intron CG5888 - chr2L 16408276 intron CG5888 - chr2L_5_16405001 chr2L_16405001 RAL-892 433 chr2L 16458808 16458816 chr2L 16459024 16459032 6 216 4.0 1.5 2.8 1.6 224 chr2L 16458808 intergenic not near genes chr2L 16458920 intergenic not near genes chr2L 16459032 intergenic not near genes chr2L_6_16455001 chr2L_16455001 RAL-892 434 chr2L 16507954 16507967 chr2L 16508062 16508075 6 108 0.0 15.0 7.5 0.7 121 chr2L 16507954 intergenic CG5953 -,Tpr2 + chr2L 16508014 intergenic CG5953 -,Tpr2 + chr2L 16508075 intergenic CG5953 -,Tpr2 + chr2L_6_16505001 chr2L_16505001 RAL-892 435 chr2L 16511941 16511987 chr2L 16519075 16519121 HMS-Beagle 21 7133 2.0 3.0 2.5 6.0 7180 chr2L 16511941 intron CG5953 - chr2L 16515531 intron CG5953 - chr2L 16519121 intron CG5953 - chr2L_21_16515001 chr2L_16515001 RAL-892 436 chr2L 16572201 16572220 chr2L 16572311 16572333 7 113 5.5 0.0 2.8 1.8 132 chr2L 16572201 intron CG42389 + chr2L 16572267 intron CG42389 + chr2L 16572333 intron CG42389 + chr2L_7_16570001 chr2L_16570001 RAL-892 437 chr2L 16594099 16594140 chr2L 16594198 16594250 5 108 6.5 0.0 3.2 1.2 151 chr2L 16594099 intron CG42389 + chr2L 16594174 intron CG42389 + chr2L 16594250 intron CG42389 + chr2L_5_16590001 chr2L_16590001 RAL-892 438 chr2L 16613984 16613999 chr2L 16614093 16614108 5 109 2.0 2.5 2.2 1.6 124 chr2L 16613984 intron CG42389 + chr2L 16614046 intron CG42389 + chr2L 16614108 intron CG42389 + chr2L_5_16610001 chr2L_16610001 RAL-892 439 chr2L 16670398 16670448 chr2L 16670495 16670539 17 96 2.0 4.0 3.0 4.2 141 chr2L 16670398 intron Trpgamma - chr2L 16670468 intron Trpgamma - chr2L 16670539 intron Trpgamma - chr2L_17_16670001 chr2L_16670001 RAL-892 440 chr2L 16695238 16695290 chr2L 16695342 16695394 18 103 3.5 2.5 3.0 4.5 156 chr2L 16695238 intron grp + chr2L 16695316 intron grp + chr2L 16695394 intron grp + chr2L_18_16695001 chr2L_16695001 RAL-892 441 chr2L 16697049 16697069 chr2L 16697262 16697282 6 213 3.0 1.5 2.2 1.9 233 chr2L 16697049 intron grp + chr2L 16697166 intron grp + chr2L 16697282 intron grp + chr2L_6_16695001 chr2L_16695001 RAL-892 442 chr2L 16958094 16958126 chr2L 16962902 16962934 Doc 15 4808 4.0 8.0 6.0 2.1 4840 chr2L 16958094 intergenic not near genes chr2L 16960514 intergenic not near genes chr2L 16962934 intergenic not near genes chr2L_15_16960001 chr2L_16960001 RAL-892 443 chr2L 17032488 17032521 chr2L 17032593 17032626 12 105 3.0 2.0 2.5 3.4 138 chr2L 17032488 intergenic not near genes chr2L 17032557 intergenic not near genes chr2L 17032626 intergenic not near genes chr2L_12_17030001 chr2L_17030001 RAL-892 444 chr2L 17062735 17062784 chr2L 17062837 17062886 5 102 3.0 1.5 2.2 1.6 151 chr2L 17062735 intergenic not near genes chr2L 17062810 intergenic not near genes chr2L 17062886 intergenic not near genes chr2L_5_17060001 chr2L_17060001 RAL-892 445 chr2L 17070180 17070215 chr2L 17070296 17070331 11 116 2.5 6.0 4.2 2.1 151 chr2L 17070180 intergenic not near genes chr2L 17070256 intergenic not near genes chr2L 17070331 intergenic not near genes chr2L_11_17070001 chr2L_17070001 RAL-892 446 chr2L 17120835 17120843 chr2L 17120934 17120942 5 99 7.5 2.5 5.0 0.8 107 chr2L 17120835 intergenic not near genes chr2L 17120888 intergenic not near genes chr2L 17120942 intergenic not near genes chr2L_5_17120001 chr2L_17120001 RAL-892 447 chr2L 17120845 17120875 chr2L 17120929 17120974 10 98 3.0 1.5 2.2 3.1 129 chr2L 17120845 intergenic not near genes chr2L 17120910 intergenic not near genes chr2L 17120974 intergenic not near genes chr2L_10_17120001 chr2L_17120001 RAL-892 448 chr2L 17167545 17167568 chr2L 17167806 17167829 pogo 12 261 8.5 1.5 5.0 2.0 284 chr2L 17167545 intron,intron CG34106 +,beat-IIIa + chr2L 17167687 intron,intron CG34106 +,beat-IIIa + chr2L 17167829 intron,intron CG34106 +,beat-IIIa + chr2L_12_17165001 chr2L_17165001 RAL-892 449 chr2L 17167569 17167593 chr2L 17167805 17167854 pogo 5 256 5.5 1.5 3.5 1.1 285 chr2L 17167569 intron,intron CG34106 +,beat-IIIa + chr2L 17167712 intron,intron CG34106 +,beat-IIIa + chr2L 17167854 intron,intron CG34106 +,beat-IIIa + chr2L_5_17165001 chr2L_17165001 RAL-892 450 chr2L 17199159 17199185 chr2L 17200646 17200672 hobo 6 1487 4.0 2.5 3.2 1.4 1513 chr2L 17199159 intron beat-IIIc - chr2L 17199916 intron beat-IIIc - chr2L 17200672 intron beat-IIIc - chr2L_6_17195001 chr2L_17195001 RAL-892 451 chr2L 17238813 17238860 chr2L 17238918 17238965 15 105 2.5 4.5 3.5 3.3 152 chr2L 17238813 intron beat-IIIc - chr2L 17238889 intron beat-IIIc - chr2L 17238965 intron beat-IIIc - chr2L_15_17235001 chr2L_17235001 RAL-892 452 chr2L 17240545 17240592 chr2L 17240652 17240699 11 107 3.0 3.5 3.2 2.6 154 chr2L 17240545 intron beat-IIIc - chr2L 17240622 intron beat-IIIc - chr2L 17240699 intron beat-IIIc - chr2L_11_17240001 chr2L_17240001 RAL-892 453 chr2L 17273175 17273221 chr2L 17277978 17278024 F-element 8 4796 3.0 2.0 2.5 2.3 4849 chr2L 17273175 intergenic not near genes chr2L 17275600 intergenic not near genes chr2L 17278024 intergenic not near genes chr2L_8_17275001 chr2L_17275001 RAL-892 454 chr2L 17327895 17327928 chr2L 17328001 17328011 10 102 4.5 3.5 4.0 2.0 116 chr2L 17327895 intergenic not near genes chr2L 17327953 intergenic not near genes chr2L 17328011 intergenic not near genes chr2L_10_17325001 chr2L_17325001 RAL-892 455 chr2L 17333014 17333031 chr2L 17333182 17333207 4 172 0.0 4.0 2.0 1.3 193 chr2L 17333014 intergenic not near genes chr2L 17333110 intergenic not near genes chr2L 17333207 intergenic not near genes chr2L_4_17330001 chr2L_17330001 RAL-892 456 chr2L 17424711 17424726 chr2L 17424842 17424858 9 132 3.0 0.5 1.8 3.2 147 chr2L 17424711 intron Dif - chr2L 17424784 intron Dif - chr2L 17424858 intron Dif - chr2L_9_17420001 chr2L_17420001 RAL-892 457 chr2L 17425757 17425793 chr2L 17425904 17425940 11 147 3.0 7.0 5.0 1.8 183 chr2L 17425757 intron Dif - chr2L 17425848 intron Dif - chr2L 17425940 intron Dif - chr2L_11_17425001 chr2L_17425001 RAL-892 458 chr2L 17432008 17432028 chr2L 17432135 17432155 1360 4 127 0.0 4.5 2.2 1.2 147 chr2L 17432008 intron Dif - chr2L 17432082 intron Dif - chr2L 17432155 intron Dif - chr2L_4_17430001 chr2L_17430001 RAL-892 459 chr2L 17517835 17517874 chr2L 17517938 17517977 13 102 2.5 5.0 3.8 2.7 142 chr2L 17517835 intron Dhc36C + chr2L 17517906 intron Dhc36C + chr2L 17517977 intron Dhc36C + chr2L_13_17515001 chr2L_17515001 RAL-892 460 chr2L 17578251 17578292 chr2L 17578416 17578455 8 163 4.0 1.0 2.5 2.3 204 chr2L 17578251 intergenic not near genes chr2L 17578353 intergenic not near genes chr2L 17578455 intergenic not near genes chr2L_8_17575001 chr2L_17575001 RAL-892 461 chr2L 17613435 17613486 chr2L 17613652 17613703 19 216 2.0 1.5 1.8 6.8 268 chr2L 17613435 intergenic not near genes chr2L 17613569 intergenic not near genes chr2L 17613703 intergenic not near genes chr2L_19_17610001 chr2L_17610001 RAL-892 462 chr2L 17687496 17687516 chr2L 17692261 17692281 F-element 8 4764 6.5 5.5 6.0 1.1 4785 chr2L 17687496 intron CadN - chr2L 17689888 intron CadN - chr2L 17692281 intron CadN - chr2L_8_17685001 chr2L_17685001 RAL-892 463 chr2L 17700639 17700673 chr2L 17701083 17701117 8 438 9.0 6.5 7.8 0.9 478 chr2L 17700639 intron CadN - chr2L 17700878 intron CadN - chr2L 17701117 intron CadN - chr2L_8_17700001 chr2L_17700001 RAL-892 464 chr2L 12194955 12194999 chr2L 17708669 17708714 8 5513720 7.5 20.0 13.8 0.5 5513759 chr2L 12194955 intron aret + chr2L 14951834 intron CG42313 - chr2L 17708714 intron CadN - chr2L_8_14950001 chr2L_14950001 RAL-892 465 chr2L 17723769 17723796 chr2L 17723882 17723909 7 112 4.5 2.5 3.5 1.6 140 chr2L 17723769 intron CadN - chr2L 17723839 intron CadN - chr2L 17723909 intron CadN - chr2L_7_17720001 chr2L_17720001 RAL-892 466 chr2L 17727853 17727856 chr2L 17729339 17729343 hobo 4 1487 10.5 11.5 11.0 0.3 1490 chr2L 17727853 intron CadN - chr2L 17728598 intron CadN - chr2L 17729343 intron CadN - chr2L_4_17725001 chr2L_17725001 RAL-892 467 chr2L 17727857 17727879 chr2L 17729336 17729361 hobo 8 1483 8.5 11.0 9.8 0.7 1504 chr2L 17727857 intron CadN - chr2L 17728609 intron CadN - chr2L 17729361 intron CadN - chr2L_8_17725001 chr2L_17725001 RAL-892 468 chr2L 17790196 17790244 chr2L 17790299 17790346 11 103 1.5 3.0 2.2 3.4 150 chr2L 17790196 intron CadN2 - chr2L 17790271 intron CadN2 - chr2L 17790346 intron CadN2 - chr2L_11_17790001 chr2L_17790001 RAL-892 469 chr2L 17819905 17819948 chr2L 17825128 17825168 copia 11 5222 4.5 4.5 4.5 2.0 5263 chr2L 17819905 intron CadN2 - chr2L 17822536 intron CadN2 - chr2L 17825168 intron CadN2 - chr2L_11_17820001 chr2L_17820001 RAL-892 470 chr2L 17855482 17855527 chr2L 17855572 17855625 13 96 3.0 3.0 3.0 3.2 143 chr2L 17855482 intron CadN2 - chr2L 17855554 intron CadN2 - chr2L 17855625 intron CadN2 - chr2L_13_17855001 chr2L_17855001 RAL-892 471 chr2L 17893368 17893411 chr2L 17894100 17894143 6 732 4.5 2.5 3.5 1.3 775 chr2L 17893368 intergenic CR43420 + chr2L 17893756 intergenic CR43420 + chr2L 17894143 5` UTR CR43420 + chr2L_6_17890001 chr2L_17890001 RAL-892 472 chr2L 17911967 17911990 chr2L 17914139 17914188 pogo 9 2193 3.0 7.5 5.2 1.5 2221 chr2L 17911967 intergenic not near genes chr2L 17913078 intergenic not near genes chr2L 17914188 intergenic CG43271 - chr2L_9_17910001 chr2L_17910001 RAL-892 473 chr2L 17951928 17951975 chr2L 17953415 17953462 hobo 18 1486 4.5 2.0 3.2 4.3 1534 chr2L 17951928 intergenic CR44398 -,CR44397 - chr2L 17952695 intergenic not near genes chr2L 17953462 intergenic not near genes chr2L_18_17950001 chr2L_17950001 RAL-892 474 chr2L 17987313 17987354 chr2L 17991497 17991538 9 4186 37.5 18.5 28.0 0.3 4225 chr2L 17987313 exon CG5681 + chr2L 17989426 intergenic not near genes chr2L 17991538 3` UTR Prosbeta5R2 + chr2L_9_17985001 chr2L_17985001 RAL-892 475 chr2L 18051861 18051902 chr2L 18061028 18061069 roo 8 9166 5.5 2.0 3.8 1.7 9208 chr2L 18051861 intron rdo + chr2L 18056465 intron rdo + chr2L 18061069 intron rdo + chr2L_8_18055001 chr2L_18055001 RAL-892 476 chr2L 18095570 18095592 chr2L 18095671 18095683 9 100 3.5 3.0 3.2 2.1 113 chr2L 18095570 intergenic not near genes chr2L 18095626 intergenic not near genes chr2L 18095683 intergenic not near genes chr2L_9_18095001 chr2L_18095001 RAL-892 477 chr2L 18111230 18111253 chr2L 18111341 18111350 6 108 7.5 2.5 5.0 1.0 120 chr2L 18111230 intergenic not near genes chr2L 18111290 intergenic not near genes chr2L 18111350 intergenic not near genes chr2L_6_18110001 chr2L_18110001 RAL-892 478 chr2L 18254792 18254839 chr2L 18254912 18254959 23 120 2.0 2.5 2.2 7.2 167 chr2L 18254792 intron CG42750 - chr2L 18254876 intron CG42750 - chr2L 18254959 intron CG42750 - chr2L_23_18250001 chr2L_18250001 RAL-892 479 chr2L 18264044 18264087 chr2L 18264141 18264184 9 97 2.0 6.5 4.2 1.7 140 chr2L 18264044 intron CG42750 - chr2L 18264114 intron CG42750 - chr2L 18264184 intron CG42750 - chr2L_9_18260001 chr2L_18260001 RAL-892 480 chr2L 18274026 18274060 chr2L 18274126 18274165 9 105 6.5 4.0 5.2 1.5 139 chr2L 18274026 intron CG42750 - chr2L 18274096 intron CG42750 - chr2L 18274165 intron CG42750 - chr2L_9_18270001 chr2L_18270001 RAL-892 481 chr2L 18303955 18303995 chr2L 18304066 18304106 9 111 5.0 5.5 5.2 1.5 151 chr2L 18303955 intergenic not near genes chr2L 18304030 intergenic not near genes chr2L 18304106 intergenic not near genes chr2L_9_18300001 chr2L_18300001 RAL-892 482 chr2L 18334608 18334637 chr2L 18334699 18334731 5 100 4.0 5.5 4.8 0.9 123 chr2L 18334608 intron Fas3 + chr2L 18334670 intron Fas3 + chr2L 18334731 intron Fas3 + chr2L_5_18330001 chr2L_18330001 RAL-892 483 chr2L 18355885 18355892 chr2L 18356026 18356033 4 141 4.0 0.0 2.0 1.3 148 chr2L 18355885 intron Fas3 + chr2L 18355959 intron Fas3 + chr2L 18356033 intron Fas3 + chr2L_4_18355001 chr2L_18355001 RAL-892 484 chr2L 18408008 18408037 chr2L 18412812 18412841 Doc 6 4803 9.0 0.0 4.5 1.1 4833 chr2L 18408008 intergenic not near genes chr2L 18410424 intergenic not near genes chr2L 18412841 intergenic not near genes chr2L_6_18410001 chr2L_18410001 RAL-892 485 chr2L 18417989 18417999 chr2L 18418086 18418097 4 98 0.0 8.5 4.2 0.8 108 chr2L 18417989 intergenic not near genes chr2L 18418043 intergenic not near genes chr2L 18418097 intergenic not near genes chr2L_4_18415001 chr2L_18415001 RAL-892 486 chr2L 18538550 18538595 chr2L 18538650 18538696 12 101 0.0 2.0 1.0 6.0 146 chr2L 18538550 intron Pde11 - chr2L 18538623 intron Pde11 - chr2L 18538696 intron Pde11 - chr2L_12_18535001 chr2L_18535001 RAL-892 487 chr2L 18664558 18664612 chr2L 18664654 18664708 22 94 6.0 3.5 4.8 3.8 150 chr2L 18664558 intergenic not near genes chr2L 18664633 intergenic not near genes chr2L 18664708 intergenic not near genes chr2L_22_18660001 chr2L_18660001 RAL-892 488 chr2L 18811400 18811438 chr2L 18811502 18811540 6 102 3.0 0.0 1.5 2.4 140 chr2L 18811400 intergenic CG10570 -,CG42502 - chr2L 18811470 intergenic CG10570 -,CG42502 - chr2L 18811540 intergenic not near genes chr2L_6_18810001 chr2L_18810001 RAL-892 489 chr2L 18812543 18812590 chr2L 18812826 18812873 15 282 1.0 5.0 3.0 3.8 330 chr2L 18812543 intergenic CG17325 +,CG42305 + chr2L 18812708 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812873 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_15_18810001 chr2L_18810001 RAL-892 490 chr2L 18898375 18898422 chr2L 18898477 18898489 10 98 2.5 0.5 1.5 4.0 114 chr2L 18898375 intergenic not near genes chr2L 18898432 intergenic not near genes chr2L 18898489 intergenic not near genes chr2L_10_18895001 chr2L_18895001 RAL-892 491 chr2L 18926570 18926592 chr2L 18926697 18926719 9 126 1.5 5.0 3.2 2.1 149 chr2L 18926570 intron ssp3 - chr2L 18926644 intron ssp3 - chr2L 18926719 intron ssp3 - chr2L_9_18925001 chr2L_18925001 RAL-892 492 chr2L 19016221 19016275 chr2L 19016337 19016391 14 116 4.5 3.0 3.8 2.9 170 chr2L 19016221 intergenic not near genes chr2L 19016306 intergenic not near genes chr2L 19016391 intergenic not near genes chr2L_14_19015001 chr2L_19015001 RAL-892 493 chr2L 19122751 19122796 chr2L 19122850 19122895 10 98 2.0 3.5 2.8 2.6 144 chr2L 19122751 exon l(2)37Cc - chr2L 19122823 intron l(2)37Cc - chr2L 19122895 intron l(2)37Cc - chr2L_10_19120001 chr2L_19120001 RAL-892 494 chr2L 19147348 19147401 chr2L 19154403 19154456 297 12 7052 3.5 3.5 3.5 2.7 7108 chr2L 19147348 intron brat + chr2L 19150902 intron brat + chr2L 19154456 intron brat + chr2L_12_19150001 chr2L_19150001 RAL-892 495 chr2L 19237306 19237337 chr2L 19237411 19237451 11 110 2.0 3.5 2.8 2.9 145 chr2L 19237306 intergenic not near genes chr2L 19237378 intergenic not near genes chr2L 19237451 intergenic not near genes chr2L_11_19235001 chr2L_19235001 RAL-892 496 chr2L 19242655 19242679 chr2L 19243114 19243138 7 456 5.0 8.0 6.5 0.9 483 chr2L 19242655 intergenic not near genes chr2L 19242896 intergenic not near genes chr2L 19243138 intergenic not near genes chr2L_7_19240001 chr2L_19240001 RAL-892 497 chr2L 19246813 19246852 chr2L 19246906 19246952 15 99 2.0 6.5 4.2 2.9 139 chr2L 19246813 intergenic not near genes chr2L 19246882 intergenic not near genes chr2L 19246952 intergenic not near genes chr2L_15_19245001 chr2L_19245001 RAL-892 498 chr2L 19256031 19256075 chr2L 19256234 19256278 16 204 43.0 9.5 26.2 0.6 247 chr2L 19256031 intergenic not near genes chr2L 19256154 intergenic not near genes chr2L 19256278 intergenic not near genes chr2L_16_19255001 chr2L_19255001 RAL-892 499 chr2L 19337980 19338030 chr2L 19338090 19338120 8 91 5.0 3.5 4.2 1.5 140 chr2L 19337980 intergenic not near genes chr2L 19338050 intergenic not near genes chr2L 19338120 intergenic not near genes chr2L_8_19335001 chr2L_19335001 RAL-892 500 chr2L 19345012 19345044 chr2L 19357241 19357273 blood 7 12226 1.0 7.0 4.0 1.4 12261 chr2L 19345012 intron dnt - chr2L 19351142 intron dnt - chr2L 19357273 intron dnt - chr2L_7_19350001 chr2L_19350001 RAL-892 501 chr2L 19357528 19357569 chr2L 19357638 19357679 16 108 5.5 5.5 5.5 2.5 151 chr2L 19357528 intron dnt - chr2L 19357604 intron dnt - chr2L 19357679 intron dnt - chr2L_16_19355001 chr2L_19355001 RAL-892 502 chr2L 19405597 19405641 chr2L 19405707 19405744 16 109 4.5 2.5 3.5 3.6 147 chr2L 19405597 intron Pax - chr2L 19405670 intron Pax - chr2L 19405744 intron Pax - chr2L_16_19405001 chr2L_19405001 RAL-892 503 chr2L 19441046 19441085 chr2L 19441143 19441182 21 97 4.5 7.0 5.8 3.1 136 chr2L 19441046 intron CG10237 - chr2L 19441114 intron CG10237 - chr2L 19441182 5` UTR CG10237 - chr2L_21_19440001 chr2L_19440001 RAL-892 504 chr2L 19557806 19557853 chr2L 19557918 19557959 8 110 0.5 3.5 2.0 2.7 153 chr2L 19557806 intergenic Tep5 + chr2L 19557882 intergenic Tep5 + chr2L 19557959 intergenic Tep5 + chr2L_8_19555001 chr2L_19555001 RAL-892 505 chr2L 19558508 19558548 chr2L 19558632 19558672 12 124 2.5 6.5 4.5 2.2 164 chr2L 19558508 intron Tep5 + chr2L 19558590 intron Tep5 + chr2L 19558672 intron Tep5 + chr2L_12_19555001 chr2L_19555001 RAL-892 506 chr2L 19560815 19560863 chr2L 19560915 19560951 15 98 3.5 0.0 1.8 5.4 136 chr2L 19560815 exon Tep5 + chr2L 19560883 intron Tep5 + chr2L 19560951 exon Tep5 + chr2L_15_19560001 chr2L_19560001 RAL-892 507 chr2L 19562512 19562562 chr2L 19562613 19562662 10 98 0.0 6.5 3.2 2.4 150 chr2L 19562512 exon Tep5 + chr2L 19562587 intron Tep5 + chr2L 19562662 exon Tep5 + chr2L_10_19560001 chr2L_19560001 RAL-892 508 chr2L 19608586 19608606 chr2L 19608697 19608700 4 107 4.5 10.0 7.2 0.5 114 chr2L 19608586 intron Lar + chr2L 19608643 intron Lar + chr2L 19608700 intron Lar + chr2L_4_19605001 chr2L_19605001 RAL-892 509 chr2L 19612952 19612964 chr2L 19613064 19613071 6 111 6.0 2.5 4.2 1.2 119 chr2L 19612952 intron Lar + chr2L 19613012 intron Lar + chr2L 19613071 intron Lar + chr2L_6_19610001 chr2L_19610001 RAL-892 510 chr2L 19620081 19620109 chr2L 19621090 19621118 jockey 4 1009 5.5 0.5 3.0 1.0 1037 chr2L 19620081 intron Lar + chr2L 19620600 intron Lar + chr2L 19621118 intron Lar + chr2L_4_19620001 chr2L_19620001 RAL-892 511 chr2L 19652558 19652602 chr2L 19674012 19674056 opus 8 21454 4.0 7.0 5.5 1.2 21498 chr2L 19652558 intron Lar + chr2L 19663307 intron Lar + chr2L 19674056 intron Lar + chr2L_8_19660001 chr2L_19660001 RAL-892 512 chr2L 19703534 19703568 chr2L 19712686 19712712 roo 10 9153 4.5 5.0 4.8 1.7 9178 chr2L 19703534 intron Lar + chr2L 19708123 intron Lar + chr2L 19712712 intron Lar + chr2L_10_19705001 chr2L_19705001 RAL-892 513 chr2L 19718495 19718519 chr2L 19718622 19718646 7 123 5.0 4.5 4.8 1.2 151 chr2L 19718495 intron Lar + chr2L 19718570 intron Lar + chr2L 19718646 intron Lar + chr2L_7_19715001 chr2L_19715001 RAL-892 514 chr2L 19762788 19762835 chr2L 19763050 19763097 pogo 10 261 2.0 3.5 2.8 2.6 309 chr2L 19762788 exon fbp - chr2L 19762942 intron fbp - chr2L 19763097 intron fbp - chr2L_10_19760001 chr2L_19760001 RAL-892 515 chr2L 19824394 19824423 chr2L 19824497 19824526 8 102 3.0 5.5 4.2 1.5 132 chr2L 19824394 intron sick + chr2L 19824460 intron sick + chr2L 19824526 intron sick + chr2L_8_19820001 chr2L_19820001 RAL-892 516 chr2L 19837260 19837304 chr2L 19837360 19837404 14 100 6.0 5.0 5.5 2.2 144 chr2L 19837260 intron sick + chr2L 19837332 intron sick + chr2L 19837404 intron sick + chr2L_14_19835001 chr2L_19835001 RAL-892 517 chr2L 20005856 20005872 chr2L 20010951 20010962 flea 7 5095 10.5 4.5 7.5 0.8 5106 chr2L 20005856 intron CG43861 - chr2L 20008409 intron CG43861 - chr2L 20010962 intron CG43861 - chr2L_7_20005001 chr2L_20005001 RAL-892 518 chr2L 20005874 20005905 chr2L 20010948 20011001 flea 13 5094 5.5 4.5 5.0 2.2 5127 chr2L 20005874 intron CG43861 - chr2L 20008438 intron CG43861 - chr2L 20011001 intron CG43861 - chr2L_13_20005001 chr2L_20005001 RAL-892 519 chr2L 20041416 20041450 chr2L 20041521 20041554 7 103 5.0 5.5 5.2 1.1 138 chr2L 20041416 intron sNPF + chr2L 20041485 intron sNPF + chr2L 20041554 intron sNPF + chr2L_7_20040001 chr2L_20040001 RAL-892 520 chr2L 20041451 20041454 chr2L 20041519 20041556 4 80 5.0 5.0 5.0 0.7 105 chr2L 20041451 intron sNPF + chr2L 20041504 intron sNPF + chr2L 20041556 intron sNPF + chr2L_4_20040001 chr2L_20040001 RAL-892 521 chr2L 20079495 20079547 chr2L 20079636 20079687 17 139 1.0 0.0 0.5 11.3 192 chr2L 20079495 intron,intron neb +,fok - chr2L 20079591 intron,intron neb +,fok - chr2L 20079687 intron,intron neb +,fok - chr2L_17_20075001 chr2L_20075001 RAL-892 522 chr2L 20272107 20272143 chr2L 20282823 20282874 copia 16 10728 6.5 4.5 5.5 2.5 10767 chr2L 20272107 intergenic not near genes chr2L 20277490 intergenic not near genes chr2L 20282874 intergenic not near genes chr2L_16_20275001 chr2L_20275001 RAL-892 523 chr2L 20303163 20303166 chr2L 20310644 20310654 blood 4 7486 0.0 5.5 2.8 1.1 7491 chr2L 20303163 intergenic not near genes chr2L 20306908 intergenic not near genes chr2L 20310654 intergenic not near genes chr2L_4_20305001 chr2L_20305001 RAL-892 524 chr2L 20303168 20303175 chr2L 20310641 20310663 blood 5 7484 1.5 5.5 3.5 1.1 7495 chr2L 20303168 intergenic not near genes chr2L 20306916 intergenic not near genes chr2L 20310663 intergenic not near genes chr2L_5_20305001 chr2L_20305001 RAL-892 525 chr2L 20310874 20310881 chr2L 20310970 20310980 6 98 2.0 5.0 3.5 1.3 106 chr2L 20310874 intergenic spir + chr2L 20310927 intergenic spir + chr2L 20310980 intergenic spir + chr2L_6_20310001 chr2L_20310001 RAL-892 526 chr2L 20322616 20322667 chr2L 20322719 20322766 9 101 3.5 1.5 2.5 2.6 150 chr2L 20322616 intron spir + chr2L 20322691 intron spir + chr2L 20322766 intron spir + chr2L_9_20320001 chr2L_20320001 RAL-892 527 chr2L 20372208 20372246 chr2L 20372469 20372507 pogo 17 261 1.5 3.5 2.5 4.9 299 chr2L 20372208 intergenic Ugt37a1 - chr2L 20372358 intergenic Ugt37a1 - chr2L 20372507 exon Ugt37a1 - chr2L_17_20370001 chr2L_20370001 RAL-892 528 chr2L 20398359 20398404 chr2L 20398539 20398590 14 184 2.0 5.0 3.5 3.1 231 chr2L 20398359 intron CG10947 - chr2L 20398474 intron CG10947 - chr2L 20398590 intron CG10947 - chr2L_14_20395001 chr2L_20395001 RAL-892 529 chr2L 20498681 20498706 chr2L 20498800 20498825 11 117 3.0 8.0 5.5 1.7 144 chr2L 20498681 intergenic not near genes chr2L 20498753 intergenic not near genes chr2L 20498825 intergenic not near genes chr2L_11_20495001 chr2L_20495001 RAL-892 530 chr2L 20524167 20524171 chr2L 20524269 20524273 5 102 7.5 0.0 3.8 1.0 106 chr2L 20524167 intergenic not near genes chr2L 20524220 intergenic not near genes chr2L 20524273 intergenic not near genes chr2L_5_20520001 chr2L_20520001 RAL-892 531 chr2L 20538055 20538092 chr2L 20538146 20538188 20 94 4.5 3.0 3.8 4.2 133 chr2L 20538055 intergenic not near genes chr2L 20538122 intergenic not near genes chr2L 20538188 intergenic not near genes chr2L_20_20535001 chr2L_20535001 RAL-892 532 chr2L 20568643 20568685 chr2L 20569053 20569094 X-element 12 409 4.0 2.0 3.0 3.0 451 chr2L 20568643 intron CR45347 + chr2L 20568868 intron CR45347 + chr2L 20569094 intron CR45347 + chr2L_12_20565001 chr2L_20565001 RAL-892 533 chr2L 20576199 20576239 chr2L 20583687 20583727 blood 12 7488 4.0 4.0 4.0 2.4 7528 chr2L 20576199 intergenic CR45347 + chr2L 20579963 intergenic not near genes chr2L 20583727 3` UTR CR44909 - chr2L_12_20575001 chr2L_20575001 RAL-892 534 chr2L 20793042 20793114 chr2L 20793206 20793211 10 153 0.0 3.0 1.5 4.0 169 chr2L 20793042 intron vari - chr2L 20793126 intron vari - chr2L 20793211 intron vari - chr2L_10_20790001 chr2L_20790001 RAL-892 535 chr2L 20835797 20835838 chr2L 20836534 20836575 Quasimodo 13 737 5.0 3.0 4.0 2.6 778 chr2L 20835797 5` UTR Oseg5 - chr2L 20836186 intergenic Oseg5 -,Spn38F - chr2L 20836575 intergenic Spn38F - chr2L_13_20835001 chr2L_20835001 RAL-892 536 chr2L 20891515 20891533 chr2L 20896636 20896654 jockey 6 5120 4.0 4.0 4.0 1.2 5139 chr2L 20891515 intron,intron CG43739 -,sky - chr2L 20894084 intron,intron CG43739 -,sky - chr2L 20896654 intron,intron CG43739 -,sky - chr2L_6_20890001 chr2L_20890001 RAL-892 537 chr2L 20891535 20891545 chr2L 20896635 20896666 jockey 6 5115 2.0 4.0 3.0 1.5 5131 chr2L 20891535 intron,intron CG43739 -,sky - chr2L 20894100 intron,intron CG43739 -,sky - chr2L 20896666 intron,intron CG43739 -,sky - chr2L_6_20890001 chr2L_20890001 RAL-892 538 chr2L 20901438 20901491 chr2L 20902617 20902662 1360 4 1169 2.5 2.0 2.2 1.2 1224 chr2L 20901438 intron,intron CG43739 -,sky - chr2L 20902050 intron,intron CG43739 -,sky - chr2L 20902662 intron,intron CG43739 -,sky - chr2L_4_20900001 chr2L_20900001 RAL-892 539 chr2L 20911006 20911061 chr2L 20911102 20911157 23 94 5.0 2.5 3.8 4.8 151 chr2L 20911006 intron,intron CG43739 -,sky - chr2L 20911082 intron,intron CG43739 -,sky - chr2L 20911157 intron,intron CG43739 -,sky - chr2L_23_20910001 chr2L_20910001 RAL-892 540 chr2L 20932403 20932445 chr2L 20934605 20934647 13 2204 32.0 54.5 43.2 0.3 2244 chr2L 20932403 exon CG9270 - chr2L 20933525 exon CG9270 - chr2L 20934647 intergenic not near genes chr2L_13_20930001 chr2L_20930001 RAL-892 541 chr2L 20939080 20939116 chr2L 20939178 20939214 8 97 6.5 7.0 6.8 1.0 134 chr2L 20939080 intergenic not near genes chr2L 20939147 intergenic not near genes chr2L 20939214 intergenic not near genes chr2L_8_20935001 chr2L_20935001 RAL-892 542 chr2L 20946925 20946961 chr2L 20947032 20947063 16 106 6.0 7.0 6.5 2.1 138 chr2L 20946925 intergenic CR44606 - chr2L 20946994 intergenic CR44606 - chr2L 20947063 intergenic CR44606 - chr2L_16_20945001 chr2L_20945001 RAL-892 543 chr2L 20961182 20961233 chr2L 20961292 20961338 21 107 4.0 4.0 4.0 4.2 156 chr2L 20961182 intergenic not near genes chr2L 20961260 intergenic not near genes chr2L 20961338 intergenic not near genes chr2L_21_20960001 chr2L_20960001 RAL-892 544 chr2L 20968307 20968341 chr2L 20968483 20968490 9 176 2.5 4.0 3.2 2.1 183 chr2L 20968307 intron CG42238 - chr2L 20968398 intron CG42238 - chr2L 20968490 intron CG42238 - chr2L_9_20965001 chr2L_20965001 RAL-892 545 chr2L 20976638 20976665 chr2L 20981473 20981500 X-element 10 4834 8.5 9.5 9.0 1.0 4862 chr2L 20976638 intron CG42238 - chr2L 20979069 intron CG42238 - chr2L 20981500 intron CG42238 - chr2L_10_20975001 chr2L_20975001 RAL-892 546 chr2L 20984728 20984761 chr2L 20984835 20984873 8 110 2.0 4.0 3.0 2.0 145 chr2L 20984728 intron CG42238 - chr2L 20984800 intron CG42238 - chr2L 20984873 intron CG42238 - chr2L_8_20980001 chr2L_20980001 RAL-892 547 chr2L 21020256 21020302 chr2L 21023953 21023997 NOF 18 3692 5.5 6.5 6.0 2.6 3741 chr2L 21020256 intron CG42238 - chr2L 21022126 intron CG42238 - chr2L 21023997 intron CG42238 - chr2L_18_21020001 chr2L_21020001 RAL-892 548 chr2L 21041118 21041165 chr2L 21049399 21049446 Tirant 13 8275 4.0 3.5 3.8 2.7 8328 chr2L 21041118 intron CG42238 - chr2L 21045282 intron CG42238 - chr2L 21049446 intron CG42238 - chr2L_13_21045001 chr2L_21045001 RAL-892 549 chr2L 21113679 21113716 chr2L 21113779 21113829 20 110 3.5 4.0 3.8 4.2 150 chr2L 21113679 intron Nhe2 + chr2L 21113754 intron Nhe2 + chr2L 21113829 intron Nhe2 + chr2L_20_21110001 chr2L_21110001 RAL-892 550 chr2L 21124509 21124561 chr2L 21124615 21124667 20 106 5.0 3.5 4.2 3.8 158 chr2L 21124509 exon Nhe2 + chr2L 21124588 intron Nhe2 + chr2L 21124667 intron Nhe2 + chr2L_20_21120001 chr2L_21120001 RAL-892 551 chr2L 21233952 21233994 chr2L 21234069 21234111 16 116 2.5 7.5 5.0 2.7 159 chr2L 21233952 intron,5` UTR CG31626 -,CR45713 + chr2L 21234032 intron,5` UTR CG31626 -,CR45713 + chr2L 21234111 intron CG31626 - chr2L_16_21230001 chr2L_21230001 RAL-892 552 chr2L 21286593 21286625 chr2L 21286691 21286723 7 98 4.0 4.5 4.2 1.3 130 chr2L 21286593 exon Mio - chr2L 21286658 intron Mio - chr2L 21286723 intron Mio - chr2L_7_21285001 chr2L_21285001 RAL-892 553 chr2L 21347548 21347583 chr2L 21355022 21355074 blood 7 7485 2.0 3.0 2.5 2.0 7526 chr2L 21347548 intron Tsp39D + chr2L 21351311 intron Tsp39D + chr2L 21355074 intron Tsp39D + chr2L_7_21350001 chr2L_21350001 RAL-892 554 chr2L 21373368 21373402 chr2L 21373490 21373524 10 119 3.5 4.5 4.0 2.0 156 chr2L 21373368 intron CG8665 + chr2L 21373446 intron CG8665 + chr2L 21373524 intron CG8665 + chr2L_10_21370001 chr2L_21370001 RAL-892 555 chr2L 21597032 21597063 chr2L 21604795 21604801 roo 11 7759 4.0 7.5 5.8 1.6 7769 chr2L 21597032 intergenic not near genes chr2L 21600916 intergenic not near genes chr2L 21604801 intergenic not near genes chr2L_11_21600001 chr2L_21600001 RAL-892 556 chr2L 21619053 21619076 chr2L 21621089 21621107 9 2035 5.0 5.0 5.0 1.5 2054 chr2L 21619053 intron CG2201 - chr2L 21620080 intron CG2201 - chr2L 21621107 intron CG2201 - chr2L_9_21620001 chr2L_21620001 RAL-892 557 chr2L 21691811 21691839 chr2L 21698301 21698329 Burdock 7 6490 8.0 0.5 4.2 1.3 6518 chr2L 21691811 intron CG31619 + chr2L 21695070 intron CG31619 + chr2L 21698329 intron CG31619 + chr2L_7_21695001 chr2L_21695001 RAL-892 558 chr2L 21745244 21745273 chr2L 21745354 21745382 12 110 2.5 8.0 5.2 1.9 138 chr2L 21745244 intron step - chr2L 21745313 intron step - chr2L 21745382 intron step - chr2L_12_21745001 chr2L_21745001 RAL-892 559 chr2L 21747643 21747663 chr2L 21747824 21747828 8 179 4.5 4.5 4.5 1.5 185 chr2L 21747643 intron step - chr2L 21747736 intron step - chr2L 21747828 intron step - chr2L_8_21745001 chr2L_21745001 RAL-892 560 chr2L 21755473 21755524 chr2L 21755617 21755668 14 143 4.5 6.5 5.5 2.2 195 chr2L 21755473 intron step - chr2L 21755570 intron step - chr2L 21755668 intron step - chr2L_14_21755001 chr2L_21755001 RAL-892 561 chr2L 21771211 21771254 chr2L 21771338 21771381 14 127 6.5 1.0 3.8 2.9 170 chr2L 21771211 intron CG31612 - chr2L 21771296 intron CG31612 - chr2L 21771381 intron CG31612 - chr2L_14_21770001 chr2L_21770001 RAL-892 562 chr2L 21806203 21806256 chr2L 21806327 21806379 15 123 4.5 4.0 4.2 2.9 176 chr2L 21806203 intergenic not near genes chr2L 21806291 intergenic not near genes chr2L 21806379 intergenic not near genes chr2L_15_21805001 chr2L_21805001 RAL-892 563 chr2L 21812606 21812613 chr2L 21812668 21812671 4 61 3.0 3.5 3.2 1.0 65 chr2L 21812606 intergenic not near genes chr2L 21812638 intergenic not near genes chr2L 21812671 intergenic not near genes chr2L_4_21810001 chr2L_21810001 RAL-892 564 chr2L 21825133 21825175 chr2L 21825587 21825629 20 451 4.0 7.0 5.5 3.1 496 chr2L 21825133 intergenic not near genes chr2L 21825381 intergenic not near genes chr2L 21825629 intergenic not near genes chr2L_20_21825001 chr2L_21825001 RAL-892 565 chr2L 21886611 21886655 chr2L 21886705 21886754 13 95 5.0 3.0 4.0 2.6 143 chr2L 21886611 intergenic not near genes chr2L 21886682 intergenic not near genes chr2L 21886754 intergenic not near genes chr2L_13_21885001 chr2L_21885001 RAL-892 566 chr2L 21981674 21981711 chr2L 21990859 21990893 roo 11 9182 3.0 6.5 4.8 1.9 9219 chr2L 21981674 exon CG2528 - chr2L 21986284 intron CG2528 - chr2L 21990893 exon CG2528 - chr2L_11_21985001 chr2L_21985001 RAL-892 567 chr2L 21996921 21996974 chr2L 21997022 21997060 9 99 2.0 4.5 3.2 2.1 139 chr2L 21996921 intergenic not near genes chr2L 21996990 intergenic not near genes chr2L 21997060 intergenic not near genes chr2L_9_21995001 chr2L_21995001 RAL-892 568 chr2L 22036716 22036754 chr2L 22036921 22036959 15 205 1.0 1.5 1.2 6.8 243 chr2L 22036716 intergenic not near genes chr2L 22036838 intergenic not near genes chr2L 22036959 intergenic not near genes chr2L_15_22035001 chr2L_22035001 RAL-892 569 chr2L 22047233 22047257 chr2L 22047378 22047396 6 143 4.0 4.0 4.0 1.2 163 chr2L 22047233 intergenic not near genes chr2L 22047314 intergenic not near genes chr2L 22047396 intergenic not near genes chr2L_6_22045001 chr2L_22045001 RAL-892 570 chr2L 22049764 22049777 chr2L 22049908 22049922 5 145 6.0 4.5 5.2 0.8 158 chr2L 22049764 intergenic not near genes chr2L 22049843 intergenic not near genes chr2L 22049922 intergenic not near genes chr2L_5_22045001 chr2L_22045001 RAL-892 571 chr2L 22165497 22165542 chr2L 22165602 22165647 12 105 7.5 5.5 6.5 1.6 150 chr2L 22165497 3` UTR CG42748 + chr2L 22165572 3` UTR CG42748 + chr2L 22165647 3` UTR CG42748 + chr2L_12_22165001 chr2L_22165001 RAL-892 572 chr2L 22548922 22548941 chr2L 22550151 22550186 1360 10 1243 1.0 7.5 4.2 1.9 1264 chr2L 22548922 intergenic CG17490 + chr2L 22549554 intergenic not near genes chr2L 22550186 intergenic CG17493 + chr2L_10_22545001 chr2L_22545001 RAL-892 573 chr2L 22558127 22558168 chr2L 22558223 22558257 16 93 7.0 9.0 8.0 1.8 130 chr2L 22558127 intergenic not near genes chr2L 22558192 intergenic not near genes chr2L 22558257 intergenic not near genes chr2L_16_22555001 chr2L_22555001 RAL-892 574 chr2L 22558377 22558423 chr2L 22558698 22558728 20 326 4.0 4.5 4.2 3.8 351 chr2L 22558377 intergenic not near genes chr2L 22558552 intergenic not near genes chr2L 22558728 intergenic not near genes chr2L_20_22555001 chr2L_22555001 RAL-892 575 chr2L 22581958 22581987 chr2L 22583767 22583796 S-element 13 1809 6.0 3.0 4.5 2.4 1838 chr2L 22581958 intron CG17494 + chr2L 22582877 intron CG17494 + chr2L 22583796 intron CG17494 + chr2L_13_22580001 chr2L_22580001 RAL-892 576 chr2L 22719414 22719450 chr2L 22727557 22727593 gypsy2 11 8141 6.0 1.5 3.8 2.3 8179 chr2L 22719414 intron CG40006 - chr2L 22723504 intron CG40006 - chr2L 22727593 intron CG40006 - chr2L_11_22720001 chr2L_22720001 RAL-892 577 chr2L 22776401 22776451 chr2L 22778210 22778260 S-element 18 1809 3.0 5.5 4.2 3.5 1859 chr2L 22776401 intergenic not near genes chr2L 22777330 intergenic not near genes chr2L 22778260 intergenic not near genes chr2L_18_22775001 chr2L_22775001 RAL-892 578 chr2L 22941230 22941276 chr2L 22941332 22941378 18 102 1.5 4.5 3.0 4.5 148 chr2L 22941230 3` UTR lt + chr2L 22941304 3` UTR lt + chr2L 22941378 3` UTR lt + chr2L_18_22940001 chr2L_22940001 RAL-892 579 chr2L 23006495 23006534 chr2L 23007181 23007230 Osvaldo 9 690 5.5 8.0 6.8 1.2 735 chr2L 23006495 intron Cht3 - chr2L 23006862 intron Cht3 - chr2L 23007230 intron Cht3 - chr2L_9_23005001 chr2L_23005001 RAL-892 580 chr2R 529324 529348 chr2R 537963 537984 Max-element 7 8640 5.0 8.0 6.5 0.9 8660 chr2R 529324 intron CG40378 + chr2R 533654 intron CG40378 + chr2R 537984 intron CG40378 + chr2R_7_530001 chr2R_530001 RAL-892 581 chr2R 1082366 1082372 chr2R 1087154 1087168 Doc 4 4794 5.0 10.0 7.5 0.5 4802 chr2R 1082366 intron rl + chr2R 1084767 intron rl + chr2R 1087168 intron rl + chr2R_4_1080001 chr2R_1080001 RAL-892 582 chr2R 1516585 1516603 chr2R 1521333 1521351 1731 20 4748 48.5 27.0 37.8 0.5 4766 chr2R 1516585 exon Maf1 - chr2R 1518968 intron Maf1 - chr2R 1521351 5` UTR Maf1 - chr2R_20_1515001 chr2R_1515001 RAL-892 583 chr2R 1919588 1919608 chr2R 1920049 1920064 4 457 17.0 23.5 20.2 0.2 476 chr2R 1919588 intron CG17684 - chr2R 1919826 intron CG17684 - chr2R 1920064 intron CG17684 - chr2R_4_1915001 chr2R_1915001 RAL-892 584 chr2R 2498968 2499011 chr2R 2508135 2508178 roo 15 9166 5.5 7.0 6.2 2.1 9210 chr2R 2498968 intron MFS17 - chr2R 2503573 intron MFS17 - chr2R 2508178 intron MFS17 - chr2R_15_2500001 chr2R_2500001 RAL-892 585 chr2R 1373049 1373067 chr2R 2589327 2589345 Cr1a 4 1216278 19.0 23.0 21.0 0.2 1216296 chr2R 1373049 intron l(2)41Ab + chr2R 1981197 intron CG17684 - chr2R 2589345 intergenic not near genes chr2R_4_1980001 chr2R_1980001 RAL-892 586 chr2R 3144067 3144104 chr2R 3393365 3393402 Doc 4 249292 13.5 6.0 9.8 0.4 249335 chr2R 3144067 intron CG42596 + chr2R 3268734 intergenic not near genes chr2R 3393402 intergenic not near genes chr2R_4_3265001 chr2R_3265001 RAL-892 587 chr2R 3291927 3292100 chr2R 3915116 3915281 5 623182 7.5 31.0 19.2 0.2 623354 chr2R 3291927 intergenic not near genes chr2R 3603604 intergenic not near genes chr2R 3915281 intron uex - chr2R_5_3600001 chr2R_3600001 RAL-892 588 chr2R 3532605 3532637 chr2R 3536068 3536100 Doc 4 3458 2.0 3.0 2.5 1.1 3495 chr2R 3532605 intergenic not near genes chr2R 3534352 intergenic not near genes chr2R 3536100 intergenic not near genes chr2R_4_3530001 chr2R_3530001 RAL-892 589 chr2R 4207504 4207507 chr2R 4207760 4207763 4 256 12.0 6.0 9.0 0.4 259 chr2R 4207504 intergenic not near genes chr2R 4207634 intergenic not near genes chr2R 4207763 intergenic not near genes chr2R_4_4205001 chr2R_4205001 RAL-892 590 chr2R 4602852 4602874 chr2R 4603201 4603205 8 359 0.5 3.0 1.8 2.9 353 chr2R 4602852 intron p120ctn + chr2R 4603028 intron p120ctn + chr2R 4603205 intron p120ctn + chr2R_8_4600001 chr2R_4600001 RAL-892 591 chr2R 4622934 4622977 chr2R 4624113 4624118 1360 7 1171 4.5 5.5 5.0 1.2 1184 chr2R 4622934 intergenic CR44101 - chr2R 4623526 intergenic not near genes chr2R 4624118 intergenic not near genes chr2R_7_4620001 chr2R_4620001 RAL-892 592 chr2R 4688106 4688132 chr2R 4688203 4688245 9 111 2.0 6.5 4.2 1.7 139 chr2R 4688106 intergenic not near genes chr2R 4688176 intergenic not near genes chr2R 4688245 intergenic not near genes chr2R_9_4685001 chr2R_4685001 RAL-892 593 chr2R 4731938 4731945 chr2R 4732041 4732048 4 103 6.5 7.5 7.0 0.5 110 chr2R 4731938 intergenic not near genes chr2R 4731993 intergenic not near genes chr2R 4732048 intergenic not near genes chr2R_4_4730001 chr2R_4730001 RAL-892 594 chr2R 4783402 4783444 chr2R 4783500 4783542 9 97 7.0 4.5 5.8 1.3 140 chr2R 4783402 intergenic not near genes chr2R 4783472 intergenic not near genes chr2R 4783542 intergenic not near genes chr2R_9_4780001 chr2R_4780001 RAL-892 595 chr2R 4821196 4821245 chr2R 4821302 4821351 16 105 2.5 4.5 3.5 3.6 155 chr2R 4821196 intron CG17528 - chr2R 4821274 intron CG17528 - chr2R 4821351 intron CG17528 - chr2R_16_4820001 chr2R_4820001 RAL-892 596 chr2R 4838851 4838898 chr2R 4840394 4840441 transib2 13 1543 6.0 3.5 4.8 2.2 1590 chr2R 4838851 intergenic not near genes chr2R 4839646 intergenic not near genes chr2R 4840441 intergenic not near genes chr2R_13_4835001 chr2R_4835001 RAL-892 597 chr2R 4870728 4870743 chr2R 4871257 4871274 R1A1-element 7 529 4.5 4.5 4.5 1.3 546 chr2R 4870728 intergenic not near genes chr2R 4871001 intergenic not near genes chr2R 4871274 intergenic not near genes chr2R_7_4870001 chr2R_4870001 RAL-892 598 chr2R 4957002 4957047 chr2R 4957125 4957170 10 123 1.5 4.0 2.8 2.6 168 chr2R 4957002 intron Ir41a + chr2R 4957086 intron Ir41a + chr2R 4957170 intron Ir41a + chr2R_10_4955001 chr2R_4955001 RAL-892 599 chr2R 4996332 4996342 chr2R 4996480 4996489 8 148 4.0 9.5 6.8 1.0 157 chr2R 4996332 intron Ir41a + chr2R 4996410 intron Ir41a + chr2R 4996489 intron Ir41a + chr2R_8_4995001 chr2R_4995001 RAL-892 600 chr2R 5022729 5022766 chr2R 5031519 5031568 4 8794 21.0 25.5 23.2 0.2 8839 chr2R 5022729 intergenic not near genes chr2R 5027148 intergenic not near genes chr2R 5031568 intergenic CR44105 - chr2R_4_5025001 chr2R_5025001 RAL-892 601 chr2R 5075928 5075967 chr2R 5076070 5076122 8 144 29.0 38.5 33.8 0.2 194 chr2R 5075928 intergenic not near genes chr2R 5076025 intergenic not near genes chr2R 5076122 intergenic not near genes chr2R_8_5075001 chr2R_5075001 RAL-892 602 chr2R 5125226 5125271 chr2R 5125564 5125609 14 335 4.5 6.0 5.2 2.3 383 chr2R 5125226 intron gus - chr2R 5125418 intron gus - chr2R 5125609 intron gus - chr2R_14_5125001 chr2R_5125001 RAL-892 603 chr2R 5209770 5209822 chr2R 5210284 5210311 23 511 0.5 4.5 2.5 6.6 541 chr2R 5209770 intron Nipped-A - chr2R 5210040 intron Nipped-A - chr2R 5210311 intron Nipped-A - chr2R_23_5210001 chr2R_5210001 RAL-892 604 chr2R 5303467 5303521 chr2R 5303575 5303629 22 107 18.0 19.0 18.5 1.1 162 chr2R 5303467 intergenic not near genes chr2R 5303548 intergenic not near genes chr2R 5303629 intergenic not near genes chr2R_22_5300001 chr2R_5300001 RAL-892 605 chr2R 5342812 5342861 chr2R 5342929 5342978 17 117 6.0 4.0 5.0 2.8 166 chr2R 5342812 intergenic not near genes chr2R 5342895 intergenic not near genes chr2R 5342978 intergenic not near genes chr2R_17_5340001 chr2R_5340001 RAL-892 606 chr2R 5417977 5418026 chr2R 5420629 5420678 Burdock 12 2651 6.5 3.5 5.0 2.0 2701 chr2R 5417977 intron laccase2 + chr2R 5419328 intron laccase2 + chr2R 5420678 intron laccase2 + chr2R_12_5415001 chr2R_5415001 RAL-892 607 chr2R 5460505 5460555 chr2R 5460624 5460679 6 115 4.5 4.5 4.5 1.1 174 chr2R 5460505 intergenic not near genes chr2R 5460592 intergenic not near genes chr2R 5460679 intergenic not near genes chr2R_6_5460001 chr2R_5460001 RAL-892 608 chr2R 5472432 5472452 chr2R 5472873 5472892 7 440 2.0 4.5 3.2 1.7 460 chr2R 5472432 intron CG30440 - chr2R 5472662 intron CG30440 - chr2R 5472892 intron CG30440 - chr2R_7_5470001 chr2R_5470001 RAL-892 609 chr2R 5476334 5476383 chr2R 5476897 5476947 14 562 5.0 4.5 4.8 2.4 613 chr2R 5476334 intron CG30440 - chr2R 5476640 intron CG30440 - chr2R 5476947 intron CG30440 - chr2R_14_5475001 chr2R_5475001 RAL-892 610 chr2R 5491646 5491698 chr2R 5491759 5491773 18 107 4.5 4.5 4.5 3.3 127 chr2R 5491646 intron CG30440 - chr2R 5491710 intron CG30440 - chr2R 5491773 intron CG30440 - chr2R_18_5490001 chr2R_5490001 RAL-892 611 chr2R 5676141 5676178 chr2R 5676254 5676291 8 111 5.5 3.5 4.5 1.5 150 chr2R 5676141 intergenic not near genes chr2R 5676216 intergenic not near genes chr2R 5676291 intergenic scaf - chr2R_8_5675001 chr2R_5675001 RAL-892 612 chr2R 5717021 5717055 chr2R 5717117 5717151 9 96 3.0 4.5 3.8 1.9 130 chr2R 5717021 intron ap - chr2R 5717086 intron ap - chr2R 5717151 intron ap - chr2R_9_5715001 chr2R_5715001 RAL-892 613 chr2R 5721591 5721612 chr2R 5721745 5721766 5 154 4.0 1.0 2.5 1.4 175 chr2R 5721591 intron ap - chr2R 5721678 intron ap - chr2R 5721766 intron ap - chr2R_5_5720001 chr2R_5720001 RAL-892 614 chr2R 5724973 5725021 chr2R 5725223 5725271 13 250 3.5 4.5 4.0 2.6 298 chr2R 5724973 intron ap - chr2R 5725122 intron ap - chr2R 5725271 intron ap - chr2R_13_5725001 chr2R_5725001 RAL-892 615 chr2R 5760693 5760732 chr2R 5760800 5760839 11 107 4.5 5.5 5.0 1.8 146 chr2R 5760693 intergenic Gp210 +,CG7791 - chr2R 5760766 intergenic Gp210 +,CG7791 - chr2R 5760839 intergenic Gp210 +,CG7791 - chr2R_11_5760001 chr2R_5760001 RAL-892 616 chr2R 5790448 5790494 chr2R 5790553 5790571 14 103 5.0 6.5 5.8 2.1 123 chr2R 5790448 intergenic not near genes chr2R 5790510 intergenic not near genes chr2R 5790571 intergenic not near genes chr2R_14_5790001 chr2R_5790001 RAL-892 617 chr2R 5861291 5861319 chr2R 5861412 5861459 8 133 1.0 2.5 1.8 2.9 168 chr2R 5861291 intergenic dpr12 + chr2R 5861375 intergenic not near genes chr2R 5861459 intergenic not near genes chr2R_8_5860001 chr2R_5860001 RAL-892 618 chr2R 5869256 5869308 chr2R 5874352 5874389 flea 12 5094 5.5 5.5 5.5 1.8 5133 chr2R 5869256 intergenic not near genes chr2R 5871822 intergenic not near genes chr2R 5874389 intergenic not near genes chr2R_12_5870001 chr2R_5870001 RAL-892 619 chr2R 5878904 5878951 chr2R 5879004 5879051 15 100 5.5 2.5 4.0 3.0 147 chr2R 5878904 intergenic CG44438 - chr2R 5878978 intergenic CG44438 - chr2R 5879051 intergenic CG44438 - chr2R_15_5875001 chr2R_5875001 RAL-892 620 chr2R 5885348 5885376 chr2R 5885497 5885525 16 149 3.5 3.5 3.5 3.6 177 chr2R 5885348 5` UTR CR44125 + chr2R 5885436 5` UTR CR44125 + chr2R 5885525 5` UTR CR44125 + chr2R_16_5885001 chr2R_5885001 RAL-892 621 chr2R 5902142 5902190 chr2R 5909715 5909769 17.6 11 7578 7.0 3.5 5.2 1.8 7627 chr2R 5902142 intron CG43366 + chr2R 5905956 intron CG43366 + chr2R 5909769 intron CG43366 + chr2R_11_5905001 chr2R_5905001 RAL-892 622 chr2R 5933778 5933824 chr2R 5933875 5933921 16 95 1.0 3.0 2.0 5.3 143 chr2R 5933778 intergenic not near genes chr2R 5933850 intergenic not near genes chr2R 5933921 intergenic not near genes chr2R_16_5930001 chr2R_5930001 RAL-892 623 chr2R 5945784 5945830 chr2R 5945897 5945943 10 112 4.0 3.5 3.8 2.1 159 chr2R 5945784 intergenic not near genes chr2R 5945864 intergenic not near genes chr2R 5945943 intergenic not near genes chr2R_10_5945001 chr2R_5945001 RAL-892 624 chr2R 5953066 5953077 chr2R 5953164 5953175 4 98 6.0 0.0 3.0 1.0 109 chr2R 5953066 intergenic not near genes chr2R 5953120 intergenic not near genes chr2R 5953175 intergenic not near genes chr2R_4_5950001 chr2R_5950001 RAL-892 625 chr2R 6033423 6033470 chr2R 6033528 6033567 14 102 3.0 3.5 3.2 3.3 144 chr2R 6033423 intron SCAP - chr2R 6033495 intron SCAP - chr2R 6033567 intron SCAP - chr2R_14_6030001 chr2R_6030001 RAL-892 626 chr2R 6050289 6050303 chr2R 6050402 6050405 6 111 9.0 0.0 4.5 1.1 116 chr2R 6050289 intergenic CG34212 - chr2R 6050347 intergenic CG34212 - chr2R 6050405 intergenic CG34212 - chr2R_6_6050001 chr2R_6050001 RAL-892 627 chr2R 6065745 6065781 chr2R 6065864 6065896 9 121 3.5 1.5 2.5 2.6 151 chr2R 6065745 intron CCHa2-R + chr2R 6065820 intron CCHa2-R + chr2R 6065896 exon CCHa2-R + chr2R_9_6065001 chr2R_6065001 RAL-892 628 chr2R 6088349 6088385 chr2R 6088462 6088498 12 113 5.5 4.5 5.0 2.0 149 chr2R 6088349 intergenic not near genes chr2R 6088424 intergenic not near genes chr2R 6088498 intergenic not near genes chr2R_12_6085001 chr2R_6085001 RAL-892 629 chr2R 6144165 6144176 chr2R 6144433 6144444 7 267 5.0 10.0 7.5 0.8 279 chr2R 6144165 intron EcR - chr2R 6144304 intron EcR - chr2R 6144444 intron EcR - chr2R_7_6140001 chr2R_6140001 RAL-892 630 chr2R 6173535 6173576 chr2R 6173629 6173669 9 97 3.5 4.5 4.0 1.8 134 chr2R 6173535 intergenic Cyp6w1 + chr2R 6173602 intergenic Cyp6w1 + chr2R 6173669 intergenic Cyp6w1 + chr2R_9_6170001 chr2R_6170001 RAL-892 631 chr2R 6177929 6177982 chr2R 6178127 6178180 18 198 2.0 7.0 4.5 3.3 251 chr2R 6177929 intergenic not near genes chr2R 6178054 intergenic not near genes chr2R 6178180 intergenic not near genes chr2R_18_6175001 chr2R_6175001 RAL-892 632 chr2R 6194669 6194697 chr2R 6194772 6194800 5 101 8.0 4.0 6.0 0.7 131 chr2R 6194669 intron Ptr - chr2R 6194734 intron Ptr - chr2R 6194800 intron Ptr - chr2R_5_6190001 chr2R_6190001 RAL-892 633 chr2R 6247791 6247837 chr2R 6247889 6247935 17 97 3.5 8.0 5.8 2.5 144 chr2R 6247791 intron Pld + chr2R 6247863 intron Pld + chr2R 6247935 intron Pld + chr2R_17_6245001 chr2R_6245001 RAL-892 634 chr2R 3998869 3998876 chr2R 6486824 6486831 4 2487955 30.0 14.0 22.0 0.2 2487962 chr2R 3998869 intergenic not near genes chr2R 5242850 intron Nipped-A - chr2R 6486831 intergenic not near genes chr2R_4_5240001 chr2R_5240001 RAL-892 635 chr2R 6494521 6494547 chr2R 6499303 6499329 F-element 11 4780 1.5 3.5 2.5 3.1 4808 chr2R 6494521 intergenic not near genes chr2R 6496925 intergenic not near genes chr2R 6499329 intergenic not near genes chr2R_11_6495001 chr2R_6495001 RAL-892 636 chr2R 6518055 6518103 chr2R 6518158 6518208 16 100 2.0 2.5 2.2 5.0 153 chr2R 6518055 intron jing + chr2R 6518132 intron jing + chr2R 6518208 intron jing + chr2R_16_6515001 chr2R_6515001 RAL-892 637 chr2R 6579765 6579802 chr2R 6584869 6584908 flea 14 5105 4.5 6.5 5.5 2.2 5143 chr2R 6579765 intron jing + chr2R 6582336 intron jing + chr2R 6584908 intron jing + chr2R_14_6580001 chr2R_6580001 RAL-892 638 chr2R 6597852 6597897 chr2R 6597960 6598005 8 106 4.5 6.0 5.2 1.3 153 chr2R 6597852 intron jing + chr2R 6597928 intron jing + chr2R 6598005 intron jing + chr2R_8_6595001 chr2R_6595001 RAL-892 639 chr2R 6607909 6607955 chr2R 6608031 6608077 23 121 6.0 4.0 5.0 3.8 168 chr2R 6607909 intron jing + chr2R 6607993 intron jing + chr2R 6608077 intron jing + chr2R_23_6605001 chr2R_6605001 RAL-892 640 chr2R 6952154 6952183 chr2R 6959754 6959783 opus 9 7600 2.5 4.5 3.5 2.0 7629 chr2R 6952154 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955968 intron,intron mim -,CheB42c - chr2R 6959783 intron,intron mim -,CheB42c - chr2R_9_6955001 chr2R_6955001 RAL-892 641 chr2R 7091201 7091236 chr2R 7091303 7091338 16 102 4.0 12.0 8.0 1.8 137 chr2R 7091201 intron esn + chr2R 7091270 intron esn + chr2R 7091338 intron esn + chr2R_16_7090001 chr2R_7090001 RAL-892 642 chr2R 7101596 7101648 chr2R 7101709 7101727 11 104 4.5 2.0 3.2 2.6 131 chr2R 7101596 intron esn + chr2R 7101662 intron esn + chr2R 7101727 intron esn + chr2R_11_7100001 chr2R_7100001 RAL-892 643 chr2R 7164090 7164126 chr2R 7164244 7164280 15 153 4.0 4.0 4.0 3.0 190 chr2R 7164090 intron pk + chr2R 7164185 intron pk + chr2R 7164280 intron pk + chr2R_15_7160001 chr2R_7160001 RAL-892 644 chr2R 7175478 7175530 chr2R 7175577 7175628 12 94 4.0 2.0 3.0 3.0 150 chr2R 7175478 intron pk + chr2R 7175553 intron pk + chr2R 7175628 intron pk + chr2R_12_7175001 chr2R_7175001 RAL-892 645 chr2R 7196561 7196583 chr2R 7201356 7201378 F-element 14 4795 8.0 7.0 7.5 1.6 4817 chr2R 7196561 intron pk + chr2R 7198970 intron pk + chr2R 7201378 intron pk + chr2R_14_7195001 chr2R_7195001 RAL-892 646 chr2R 7209861 7209871 chr2R 7217642 7217652 roo 5 7781 0.0 6.0 3.0 1.2 7791 chr2R 7209861 intron pk + chr2R 7213756 intron pk + chr2R 7217652 intron pk + chr2R_5_7210001 chr2R_7210001 RAL-892 647 chr2R 7235808 7235819 chr2R 7240919 7240929 jockey 4 5111 8.5 4.5 6.5 0.5 5121 chr2R 7235808 intergenic not near genes chr2R 7238368 intergenic not near genes chr2R 7240929 intergenic not near genes chr2R_4_7235001 chr2R_7235001 RAL-892 648 chr2R 7235820 7235834 chr2R 7240907 7240942 jockey 7 5103 6.0 3.0 4.5 1.3 5122 chr2R 7235820 intergenic not near genes chr2R 7238381 intergenic not near genes chr2R 7240942 intergenic not near genes chr2R_7_7235001 chr2R_7235001 RAL-892 649 chr2R 7290178 7290223 chr2R 7290300 7290345 9 122 2.5 4.5 3.5 2.0 167 chr2R 7290178 intron pwn + chr2R 7290262 intron pwn + chr2R 7290345 intron pwn + chr2R_9_7290001 chr2R_7290001 RAL-892 650 chr2R 7328123 7328153 chr2R 7328254 7328284 9 129 2.5 7.0 4.8 1.6 161 chr2R 7328123 intron,intron Dscam1 -,CR45129 + chr2R 7328204 intron,intron Dscam1 -,CR45129 + chr2R 7328284 intron,intron Dscam1 -,CR45129 + chr2R_9_7325001 chr2R_7325001 RAL-892 651 chr2R 7417902 7418154 chr2R 7418008 7418238 17 98 8.5 12.0 10.2 1.5 336 chr2R 7417902 intergenic not near genes chr2R 7418070 intergenic not near genes chr2R 7418238 intergenic not near genes chr2R_17_7415001 chr2R_7415001 RAL-892 652 chr2R 7434874 7434909 chr2R 7439195 7439230 Juan 10 4321 6.0 6.0 6.0 1.4 4356 chr2R 7434874 intergenic so + chr2R 7437052 intergenic not near genes chr2R 7439230 intergenic not near genes chr2R_10_7435001 chr2R_7435001 RAL-892 653 chr2R 7459261 7459283 chr2R 7459368 7459391 12 108 7.5 3.0 5.2 1.9 130 chr2R 7459261 intergenic Inos -,CG11141 - chr2R 7459326 intergenic CG11141 -,Inos - chr2R 7459391 intergenic CG11141 - chr2R_12_7455001 chr2R_7455001 RAL-892 654 chr2R 7608392 7608432 chr2R 7613615 7613655 I-element 9 5222 6.0 7.0 6.5 1.2 5263 chr2R 7608392 intron CG1358 - chr2R 7611024 intron CG1358 - chr2R 7613655 intron CG1358 - chr2R_9_7610001 chr2R_7610001 RAL-892 655 chr2R 7642777 7642795 chr2R 7642916 7642934 4 139 6.0 8.5 7.2 0.5 157 chr2R 7642777 intron CG43340 + chr2R 7642856 intron CG43340 + chr2R 7642934 intron CG43340 + chr2R_4_7640001 chr2R_7640001 RAL-892 656 chr2R 7663995 7664029 chr2R 7664116 7664121 7 118 1.0 6.5 3.8 1.5 126 chr2R 7663995 intron CG2065 + chr2R 7664058 exon CG2065 + chr2R 7664121 exon CG2065 + chr2R_7_7660001 chr2R_7660001 RAL-892 657 chr2R 7691996 7692034 chr2R 7692097 7692135 13 101 2.5 4.0 3.2 3.1 139 chr2R 7691996 intron CG1399 - chr2R 7692066 intron CG1399 - chr2R 7692135 intron CG1399 - chr2R_13_7690001 chr2R_7690001 RAL-892 658 chr2R 7714063 7714117 chr2R 7714159 7714220 17 96 4.5 4.5 4.5 3.1 157 chr2R 7714063 exon CG1942 + chr2R 7714142 3` UTR CG1942 + chr2R 7714220 intergenic CG1942 + chr2R_17_7710001 chr2R_7710001 RAL-892 659 chr2R 7742612 7742642 chr2R 7742879 7742885 5 267 3.0 3.0 3.0 1.2 273 chr2R 7742612 intron,intron CG30497 -,CG45093 - chr2R 7742748 intron,intron CG30497 -,CG45093 - chr2R 7742885 intron,intron CG30497 -,CG45093 - chr2R_5_7740001 chr2R_7740001 RAL-892 660 chr2R 7815654 7815700 chr2R 7822143 7822172 Burdock 6 6486 4.5 5.5 5.0 1.0 6518 chr2R 7815654 intergenic CG1882 + chr2R 7818913 intergenic not near genes chr2R 7822172 3` UTR cathD - chr2R_6_7815001 chr2R_7815001 RAL-892 661 chr2R 7861934 7861945 chr2R 7862151 7862162 4 216 11.0 5.5 8.2 0.4 228 chr2R 7861934 intron Dgk - chr2R 7862048 intron Dgk - chr2R 7862162 intron Dgk - chr2R_4_7860001 chr2R_7860001 RAL-892 662 chr2R 7862235 7862250 chr2R 7867368 7867385 flea 10 5132 3.5 6.0 4.8 1.7 5150 chr2R 7862235 intron Dgk - chr2R 7864810 intron Dgk - chr2R 7867385 intron Dgk - chr2R_10_7860001 chr2R_7860001 RAL-892 663 chr2R 7869173 7869207 chr2R 7873977 7873986 Doc 10 4799 5.0 0.0 2.5 2.9 4813 chr2R 7869173 intron Dgk - chr2R 7871580 intron Dgk - chr2R 7873986 intron Dgk - chr2R_10_7870001 chr2R_7870001 RAL-892 664 chr2R 8089238 8089286 chr2R 8089344 8089392 16 105 4.5 7.5 6.0 2.3 154 chr2R 8089238 3` UTR sut2 + chr2R 8089315 intergenic sut2 +,sut3 + chr2R 8089392 intergenic sut3 +,sut2 + chr2R_16_8085001 chr2R_8085001 RAL-892 665 chr2R 8151604 8151614 chr2R 8151693 8151714 5 98 8.5 3.5 6.0 0.7 110 chr2R 8151604 intron,intron Lpin -,kermit - chr2R 8151659 intron,intron Lpin -,kermit - chr2R 8151714 intron,intron Lpin -,kermit - chr2R_5_8150001 chr2R_8150001 RAL-892 666 chr2R 8151615 8151637 chr2R 8151685 8151737 16 91 3.5 2.5 3.0 4.0 122 chr2R 8151615 intron,intron Lpin -,kermit - chr2R 8151676 intron,intron Lpin -,kermit - chr2R 8151737 intron,intron Lpin -,kermit - chr2R_16_8150001 chr2R_8150001 RAL-892 667 chr2R 8157880 8157910 chr2R 8157988 8157992 9 100 5.5 3.5 4.5 1.6 112 chr2R 8157880 5` UTR CR44068 + chr2R 8157936 5` UTR CR44068 + chr2R 8157992 5` UTR CR44068 + chr2R_9_8155001 chr2R_8155001 RAL-892 668 chr2R 8203738 8203775 chr2R 8203836 8203879 17 110 2.0 1.0 1.5 6.8 141 chr2R 8203738 intron LRP1 + chr2R 8203808 intron LRP1 + chr2R 8203879 intron LRP1 + chr2R_17_8200001 chr2R_8200001 RAL-892 669 chr2R 8236020 8236053 chr2R 8236118 8236153 9 100 6.0 3.0 4.5 1.6 133 chr2R 8236020 intergenic not near genes chr2R 8236086 intergenic not near genes chr2R 8236153 intergenic not near genes chr2R_9_8235001 chr2R_8235001 RAL-892 670 chr2R 8277626 8277668 chr2R 8277741 8277777 9 109 5.0 3.5 4.2 1.7 151 chr2R 8277626 5` UTR CR44280 + chr2R 8277702 5` UTR CR44280 + chr2R 8277777 5` UTR CR44280 + chr2R_9_8275001 chr2R_8275001 RAL-892 671 chr2R 8328274 8328308 chr2R 8328378 8328402 14 102 2.0 1.0 1.5 5.6 128 chr2R 8328274 intron pdm3 + chr2R 8328338 intron pdm3 + chr2R 8328402 intron pdm3 + chr2R_14_8325001 chr2R_8325001 RAL-892 672 chr2R 8330846 8330888 chr2R 8331351 8331394 roo 12 505 5.0 8.0 6.5 1.6 548 chr2R 8330846 intron pdm3 + chr2R 8331120 intron pdm3 + chr2R 8331394 intron pdm3 + chr2R_12_8330001 chr2R_8330001 RAL-892 673 chr2R 8339730 8339779 chr2R 8339831 8339880 21 101 6.0 4.5 5.2 3.4 150 chr2R 8339730 intron pdm3 + chr2R 8339805 intron pdm3 + chr2R 8339880 intron pdm3 + chr2R_21_8335001 chr2R_8335001 RAL-892 674 chr2R 8398215 8398235 chr2R 8402991 8403011 Doc 8 4790 4.0 2.5 3.2 1.9 4796 chr2R 8398215 intron CG2121 - chr2R 8400613 intron CG2121 - chr2R 8403011 intron CG2121 - chr2R_8_8400001 chr2R_8400001 RAL-892 675 chr2R 8414269 8414309 chr2R 8414372 8414412 15 102 3.5 5.0 4.2 2.9 143 chr2R 8414269 intergenic not near genes chr2R 8414340 intergenic not near genes chr2R 8414412 intergenic not near genes chr2R_15_8410001 chr2R_8410001 RAL-892 676 chr2R 8416307 8416314 chr2R 8417151 8417158 I-element 5 844 6.0 3.5 4.8 0.9 851 chr2R 8416307 intergenic not near genes chr2R 8416732 intergenic CG43296 - chr2R 8417158 intergenic CG43296 - chr2R_5_8415001 chr2R_8415001 RAL-892 677 chr2R 8489748 8489757 chr2R 8489807 8489856 7 83 3.0 3.5 3.2 1.7 108 chr2R 8489748 intron mtt - chr2R 8489802 intron mtt - chr2R 8489856 intron mtt - chr2R_7_8485001 chr2R_8485001 RAL-892 678 chr2R 8518779 8518799 chr2R 12066268 12066287 6 3547486 15.5 0.0 7.8 0.7 3547508 chr2R 8518779 intron mtt - chr2R 10292533 intron CAP + chr2R 12066287 intron CG8888 - chr2R_6_10290001 chr2R_10290001 RAL-892 679 chr2R 8561515 8561533 chr2R 8561586 8561615 7 86 1.0 3.0 2.0 2.3 100 chr2R 8561515 intergenic not near genes chr2R 8561565 intergenic not near genes chr2R 8561615 intergenic not near genes chr2R_7_8560001 chr2R_8560001 RAL-892 680 chr2R 8612563 8612610 chr2R 8612660 8612707 13 97 6.0 5.0 5.5 2.0 144 chr2R 8612563 intron CG8642 - chr2R 8612635 intron CG8642 - chr2R 8612707 intron CG8642 - chr2R_13_8610001 chr2R_8610001 RAL-892 681 chr2R 8638345 8638364 chr2R 8638432 8638457 4 90 9.0 5.5 7.2 0.5 112 chr2R 8638345 intergenic not near genes chr2R 8638401 intergenic not near genes chr2R 8638457 intergenic not near genes chr2R_4_8635001 chr2R_8635001 RAL-892 682 chr2R 8658246 8658257 chr2R 8658307 8658315 4 63 2.5 3.5 3.0 1.0 69 chr2R 8658246 intron ptc + chr2R 8658280 intron ptc + chr2R 8658315 intron ptc + chr2R_4_8655001 chr2R_8655001 RAL-892 683 chr2R 8689935 8689975 chr2R 8690042 8690082 14 107 6.0 7.0 6.5 1.9 147 chr2R 8689935 intergenic not near genes chr2R 8690008 intergenic not near genes chr2R 8690082 intergenic not near genes chr2R_14_8690001 chr2R_8690001 RAL-892 684 chr2R 8722756 8722791 chr2R 8723013 8723046 pogo 10 252 4.5 4.0 4.2 1.9 290 chr2R 8722756 intron CG14767 - chr2R 8722901 intron CG14767 - chr2R 8723046 intron CG14767 - chr2R_10_8720001 chr2R_8720001 RAL-892 685 chr2R 8806323 8806351 chr2R 8806527 8806570 6 206 2.0 3.0 2.5 1.7 247 chr2R 8806323 intron sns + chr2R 8806446 intron sns + chr2R 8806570 intron sns + chr2R_6_8805001 chr2R_8805001 RAL-892 686 chr2R 8878576 8878599 chr2R 8878685 8878708 6 109 5.5 7.5 6.5 0.8 132 chr2R 8878576 exon RyR + chr2R 8878642 intron RyR + chr2R 8878708 intron RyR + chr2R_6_8875001 chr2R_8875001 RAL-892 687 chr2R 9029603 9029648 chr2R 9029702 9029747 22 96 4.5 5.0 4.8 3.8 144 chr2R 9029603 intron CG8170 - chr2R 9029675 intron CG8170 - chr2R 9029747 intron CG8170 - chr2R_22_9025001 chr2R_9025001 RAL-892 688 chr2R 9052685 9052737 chr2R 9052784 9052838 13 99 1.5 4.5 3.0 3.2 153 chr2R 9052685 intron CG13743 - chr2R 9052762 intron CG13743 - chr2R 9052838 intron CG13743 - chr2R_13_9050001 chr2R_9050001 RAL-892 689 chr2R 9055778 9055822 chr2R 9055877 9055915 10 95 8.5 7.0 7.8 1.1 137 chr2R 9055778 intron CG13743 - chr2R 9055846 intron CG13743 - chr2R 9055915 intron CG13743 - chr2R_10_9055001 chr2R_9055001 RAL-892 690 chr2R 9078468 9078513 chr2R 9078566 9078611 13 98 7.5 7.0 7.2 1.6 143 chr2R 9078468 intergenic CG8083 + chr2R 9078540 intergenic CG8083 + chr2R 9078611 intergenic CG8083 + chr2R_13_9075001 chr2R_9075001 RAL-892 691 chr2R 9161955 9162006 chr2R 9162060 9162111 21 104 1.0 5.0 3.0 5.2 156 chr2R 9161955 5` UTR CR44283 + chr2R 9162033 intergenic CG8046 -,CR44283 + chr2R 9162111 3` UTR CG8046 - chr2R_21_9160001 chr2R_9160001 RAL-892 692 chr2R 9198538 9198581 chr2R 9198639 9198682 9 101 2.5 0.0 1.2 4.1 144 chr2R 9198538 intron unpg + chr2R 9198610 intron unpg + chr2R 9198682 intron unpg + chr2R_9_9195001 chr2R_9195001 RAL-892 693 chr2R 9212675 9212705 chr2R 9213181 9213210 roo 6 498 6.5 2.5 4.5 1.1 535 chr2R 9212675 intergenic CR45309 + chr2R 9212942 intergenic CR45309 + chr2R 9213210 5` UTR CR45309 + chr2R_6_9210001 chr2R_9210001 RAL-892 694 chr2R 9378111 9378139 chr2R 9378198 9378202 9 92 2.0 2.5 2.2 2.8 91 chr2R 9378111 intron CG13954 - chr2R 9378156 intron CG13954 - chr2R 9378202 intron CG13954 - chr2R_9_9375001 chr2R_9375001 RAL-892 695 chr2R 9391035 9391078 chr2R 9391616 9391659 16 581 4.0 4.0 4.0 3.2 624 chr2R 9391035 exon l(2)03659 + chr2R 9391347 exon l(2)03659 + chr2R 9391659 exon l(2)03659 + chr2R_16_9390001 chr2R_9390001 RAL-892 696 chr2R 9429690 9429716 chr2R 9429824 9429871 7 148 4.5 2.5 3.5 1.6 181 chr2R 9429690 intron Pdk + chr2R 9429780 intron Pdk + chr2R 9429871 intron Pdk + chr2R_7_9425001 chr2R_9425001 RAL-892 697 chr2R 9434521 9434554 chr2R 9434623 9434657 12 101 8.0 7.0 7.5 1.4 136 chr2R 9434521 3` UTR Pdk + chr2R 9434589 3` UTR Pdk + chr2R 9434657 intergenic ced-6 -,Pdk + chr2R_12_9430001 chr2R_9430001 RAL-892 698 chr2R 9434557 9434562 chr2R 9434622 9434665 6 95 6.5 6.5 6.5 0.8 108 chr2R 9434557 3` UTR Pdk + chr2R 9434611 3` UTR Pdk + chr2R 9434665 intergenic ced-6 -,Pdk + chr2R_6_9430001 chr2R_9430001 RAL-892 699 chr2R 9480059 9480103 chr2R 9490610 9490654 roo 13 10551 6.5 4.0 5.2 2.1 10595 chr2R 9480059 intergenic not near genes chr2R 9485356 intergenic not near genes chr2R 9490654 intergenic not near genes chr2R_13_9485001 chr2R_9485001 RAL-892 700 chr2R 9541611 9541653 chr2R 9541708 9541750 16 97 0.0 5.0 2.5 4.6 139 chr2R 9541611 intergenic brp +,CG1888 - chr2R 9541680 intergenic brp +,CG1888 - chr2R 9541750 intergenic brp +,CG1888 - chr2R_16_9540001 chr2R_9540001 RAL-892 701 chr2R 9555028 9555054 chr2R 9555128 9555154 11 100 8.0 7.0 7.5 1.3 126 chr2R 9555028 intergenic not near genes chr2R 9555091 intergenic not near genes chr2R 9555154 intergenic not near genes chr2R_11_9555001 chr2R_9555001 RAL-892 702 chr2R 9561825 9561850 chr2R 9561917 9561958 9 106 0.0 0.0 0.0 9.0 133 chr2R 9561825 3` UTR,intron CR45281 -,CG1809 + chr2R 9561892 3` UTR,intron CR45281 -,CG1809 + chr2R 9561958 3` UTR,intron CR45281 -,CG1809 + chr2R_9_9560001 chr2R_9560001 RAL-892 703 chr2R 9651015 9651053 chr2R 9651118 9651156 4 103 4.5 4.5 4.5 0.7 141 chr2R 9651015 intron Mmp2 - chr2R 9651086 intron Mmp2 - chr2R 9651156 intron Mmp2 - chr2R_4_9650001 chr2R_9650001 RAL-892 704 chr2R 9726596 9726639 chr2R 9734167 9734210 17.6 10 7571 5.0 2.0 3.5 2.2 7614 chr2R 9726596 intron sqa - chr2R 9730403 intron sqa - chr2R 9734210 intron sqa - chr2R_10_9730001 chr2R_9730001 RAL-892 705 chr2R 9794527 9794578 chr2R 9794632 9794683 12 99 4.5 3.5 4.0 2.4 156 chr2R 9794527 intron,intron CG1688 -,CG1698 + chr2R 9794605 intron,intron CG1688 -,CG1698 + chr2R 9794683 intron,intron CG1688 -,CG1698 + chr2R_12_9790001 chr2R_9790001 RAL-892 706 chr2R 9871028 9871074 chr2R 9871530 9871578 roo 7 495 1.5 5.0 3.2 1.7 550 chr2R 9871028 intron cbx - chr2R 9871303 intron cbx - chr2R 9871578 intron,5` UTR cbx -,CG18446 + chr2R_7_9870001 chr2R_9870001 RAL-892 707 chr2R 9945415 9945466 chr2R 9945631 9945682 BS 11 215 6.5 3.5 5.0 1.8 267 chr2R 9945415 intron Mef2 - chr2R 9945548 intron Mef2 - chr2R 9945682 intron Mef2 - chr2R_11_9945001 chr2R_9945001 RAL-892 708 chr2R 10047793 10047841 chr2R 10047895 10047943 13 102 3.5 3.0 3.2 3.1 150 chr2R 10047793 intron oys - chr2R 10047868 intron oys - chr2R 10047943 intron oys - chr2R_13_10045001 chr2R_10045001 RAL-892 709 chr2R 10085282 10085326 chr2R 10085406 10085450 13 120 3.0 4.5 3.8 2.7 168 chr2R 10085282 5` UTR CG2269 + chr2R 10085366 5` UTR CG2269 + chr2R 10085450 intron,3` UTR CG2269 +,sut4 - chr2R_13_10085001 chr2R_10085001 RAL-892 710 chr2R 10168338 10168365 chr2R 10168436 10168455 4 93 1.5 5.5 3.5 0.9 117 chr2R 10168338 intron KCNQ - chr2R 10168396 intron KCNQ - chr2R 10168455 intron KCNQ - chr2R_4_10165001 chr2R_10165001 RAL-892 711 chr2R 10171090 10171144 chr2R 10171194 10171248 20 103 1.0 5.0 3.0 5.0 158 chr2R 10171090 intron KCNQ - chr2R 10171169 intron KCNQ - chr2R 10171248 intron KCNQ - chr2R_20_10170001 chr2R_10170001 RAL-892 712 chr2R 10176855 10176907 chr2R 10186045 10186077 roo 13 9187 6.0 3.5 4.8 2.2 9222 chr2R 10176855 intron KCNQ - chr2R 10181466 intron KCNQ - chr2R 10186077 intron KCNQ - chr2R_13_10180001 chr2R_10180001 RAL-892 713 chr2R 10189195 10189235 chr2R 10189293 10189333 14 98 1.5 6.5 4.0 2.8 138 chr2R 10189195 intron KCNQ - chr2R 10189264 intron KCNQ - chr2R 10189333 intron KCNQ - chr2R_14_10185001 chr2R_10185001 RAL-892 714 chr2R 10193208 10193233 chr2R 10193312 10193337 7 104 6.0 5.0 5.5 1.1 129 chr2R 10193208 intergenic not near genes chr2R 10193272 intergenic not near genes chr2R 10193337 intergenic not near genes chr2R_7_10190001 chr2R_10190001 RAL-892 715 chr2R 10257137 10257190 chr2R 10257248 10257301 17 111 4.0 1.0 2.5 4.9 164 chr2R 10257137 intron CG12911 + chr2R 10257219 intron CG12911 + chr2R 10257301 intron CG12911 + chr2R_17_10255001 chr2R_10255001 RAL-892 716 chr2R 10274804 10274828 chr2R 10274900 10274924 5 96 6.5 0.0 3.2 1.2 120 chr2R 10274804 intron CAP + chr2R 10274864 intron CAP + chr2R 10274924 intron CAP + chr2R_5_10270001 chr2R_10270001 RAL-892 717 chr2R 10313304 10313348 chr2R 10313412 10313456 14 108 0.5 9.0 4.8 2.4 152 chr2R 10313304 intergenic not near genes chr2R 10313380 intergenic not near genes chr2R 10313456 intergenic Ndg + chr2R_14_10310001 chr2R_10310001 RAL-892 718 chr2R 10370493 10370524 chr2R 10370656 10370687 10 163 2.5 4.0 3.2 2.4 194 chr2R 10370493 intron CG42732 - chr2R 10370590 intron CG42732 - chr2R 10370687 intron CG42732 - chr2R_10_10370001 chr2R_10370001 RAL-892 719 chr2R 10411783 10411834 chr2R 10411885 10411932 10 97 4.0 4.5 4.2 1.9 149 chr2R 10411783 intron CG42732 - chr2R 10411858 intron CG42732 - chr2R 10411932 intron CG42732 - chr2R_10_10410001 chr2R_10410001 RAL-892 720 chr2R 10449179 10449219 chr2R 10449507 10449544 17 326 4.5 5.5 5.0 2.8 365 chr2R 10449179 intron Galphao + chr2R 10449362 intron,3` UTR Galphao +,Cyp49a1 - chr2R 10449544 intron,3` UTR Galphao +,Cyp49a1 - chr2R_17_10445001 chr2R_10445001 RAL-892 721 chr2R 10454092 10454127 chr2R 10454175 10454224 20 93 5.5 3.0 4.2 3.8 132 chr2R 10454092 intron,intron Galphao +,Cyp49a1 - chr2R 10454158 intron,intron Galphao +,Cyp49a1 - chr2R 10454224 intron,intron Galphao +,Cyp49a1 - chr2R_20_10450001 chr2R_10450001 RAL-892 722 chr2R 10469003 10469051 chr2R 10469149 10469197 27 146 3.5 2.5 3.0 6.8 194 chr2R 10469003 intron CG11777 + chr2R 10469100 intron CG11777 + chr2R 10469197 intron CG11777 + chr2R_27_10465001 chr2R_10465001 RAL-892 723 chr2R 10485882 10485924 chr2R 10485981 10486023 4 99 2.0 0.0 1.0 2.0 141 chr2R 10485882 intron lola - chr2R 10485952 intron lola - chr2R 10486023 intron lola - chr2R_4_10485001 chr2R_10485001 RAL-892 724 chr2R 10528260 10528313 chr2R 10528695 10528732 18 432 2.0 3.5 2.8 4.7 472 chr2R 10528260 intron lola - chr2R 10528496 intron lola - chr2R 10528732 intron lola - chr2R_18_10525001 chr2R_10525001 RAL-892 725 chr2R 10551041 10551179 chr2R 10551152 10551318 7 123 0.0 0.0 0.0 7.0 277 chr2R 10551041 intergenic not near genes chr2R 10551180 intergenic not near genes chr2R 10551318 intergenic not near genes chr2R_7_10550001 chr2R_10550001 RAL-892 726 chr2R 10563229 10563255 chr2R 10563347 10563373 7 118 0.0 5.5 2.8 1.8 144 chr2R 10563229 intron psq + chr2R 10563301 intron psq + chr2R 10563373 intron psq + chr2R_7_10560001 chr2R_10560001 RAL-892 727 chr2R 10571996 10572034 chr2R 10572202 10572246 11 209 5.0 3.0 4.0 2.2 250 chr2R 10571996 intron psq + chr2R 10572121 intron psq + chr2R 10572246 intron psq + chr2R_11_10570001 chr2R_10570001 RAL-892 728 chr2R 10585575 10585591 chr2R 10594154 10594168 Tirant 7 8587 5.0 4.0 4.5 1.3 8593 chr2R 10585575 intron psq + chr2R 10589872 intron psq + chr2R 10594168 intron psq + chr2R_7_10585001 chr2R_10585001 RAL-892 729 chr2R 10607455 10607497 chr2R 10607683 10607705 13 224 1.5 8.0 4.8 2.2 250 chr2R 10607455 intron psq + chr2R 10607580 intron psq + chr2R 10607705 intron psq + chr2R_13_10605001 chr2R_10605001 RAL-892 730 chr2R 10622335 10622358 chr2R 10637120 10637143 mdg1 7 14785 6.5 7.5 7.0 0.9 14808 chr2R 10622335 intron CG11883 + chr2R 10629739 intron CG11883 + chr2R 10637143 intron CG11883 + chr2R_7_10625001 chr2R_10625001 RAL-892 731 chr2R 10658040 10658088 chr2R 10658146 10658193 10 109 5.0 10.0 7.5 1.2 153 chr2R 10658040 intergenic CR44452 - chr2R 10658116 intergenic not near genes chr2R 10658193 intergenic not near genes chr2R_10_10655001 chr2R_10655001 RAL-892 732 chr2R 10658911 10658925 chr2R 10659016 10659030 5 105 5.5 0.0 2.8 1.3 119 chr2R 10658911 intergenic not near genes chr2R 10658970 intergenic not near genes chr2R 10659030 intergenic not near genes chr2R_5_10655001 chr2R_10655001 RAL-892 733 chr2R 10675366 10675378 chr2R 10675467 10675479 4 101 0.5 2.5 1.5 1.6 113 chr2R 10675366 intron stan + chr2R 10675422 intron stan + chr2R 10675479 intron stan + chr2R_4_10675001 chr2R_10675001 RAL-892 734 chr2R 10757528 10757564 chr2R 10757651 10757687 10 122 3.0 6.0 4.5 1.8 159 chr2R 10757528 5` UTR CG33144 - chr2R 10757608 intron CG33144 - chr2R 10757687 intron CG33144 - chr2R_10_10755001 chr2R_10755001 RAL-892 735 chr2R 10794890 10794942 chr2R 10794988 10795040 17 98 5.5 5.0 5.2 2.7 150 chr2R 10794890 intron CG33144 - chr2R 10794965 intron CG33144 - chr2R 10795040 intron CG33144 - chr2R_17_10790001 chr2R_10790001 RAL-892 736 chr2R 10827331 10827362 chr2R 10827421 10827464 5 102 1.5 3.5 2.5 1.4 133 chr2R 10827331 exon CG12325 + chr2R 10827398 3` UTR CG12325 + chr2R 10827464 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_5_10825001 chr2R_10825001 RAL-892 737 chr2R 10851166 10851216 chr2R 10851269 10851321 20 105 1.5 5.0 3.2 4.8 155 chr2R 10851166 intron CG30015 - chr2R 10851244 intron CG30015 - chr2R 10851321 intron CG30015 - chr2R_20_10850001 chr2R_10850001 RAL-892 738 chr2R 10871629 10871676 chr2R 10871728 10871780 11 98 2.0 2.5 2.2 3.4 151 chr2R 10871629 intron CG30015 - chr2R 10871704 intron CG30015 - chr2R 10871780 intron CG30015 - chr2R_11_10870001 chr2R_10870001 RAL-892 739 chr2R 10922766 10922778 chr2R 10922872 10922877 4 104 0.0 7.5 3.8 0.8 111 chr2R 10922766 intergenic not near genes chr2R 10922822 intergenic not near genes chr2R 10922877 intergenic not near genes chr2R_4_10920001 chr2R_10920001 RAL-892 740 chr2R 10948016 10948061 chr2R 10955587 10955597 17.6 6 7565 1.0 5.0 3.0 1.5 7581 chr2R 10948016 intergenic not near genes chr2R 10951806 intergenic not near genes chr2R 10955597 intergenic not near genes chr2R_6_10950001 chr2R_10950001 RAL-892 741 chr2R 10959071 10959102 chr2R 10959170 10959201 10 98 2.0 2.0 2.0 3.3 130 chr2R 10959071 intergenic not near genes chr2R 10959136 intergenic not near genes chr2R 10959201 intergenic not near genes chr2R_10_10955001 chr2R_10955001 RAL-892 742 chr2R 10962494 10962537 chr2R 10962605 10962647 9 110 0.5 1.0 0.8 5.0 153 chr2R 10962494 intergenic not near genes chr2R 10962570 intergenic not near genes chr2R 10962647 intergenic not near genes chr2R_9_10960001 chr2R_10960001 RAL-892 743 chr2R 10968744 10968782 chr2R 10968833 10968882 12 98 0.5 3.5 2.0 4.0 138 chr2R 10968744 intergenic not near genes chr2R 10968813 intergenic not near genes chr2R 10968882 intergenic not near genes chr2R_12_10965001 chr2R_10965001 RAL-892 744 chr2R 10979656 10979679 chr2R 10980141 10980169 297 6 488 2.5 6.0 4.2 1.2 513 chr2R 10979656 intergenic not near genes chr2R 10979912 intergenic not near genes chr2R 10980169 intergenic not near genes chr2R_6_10975001 chr2R_10975001 RAL-892 745 chr2R 10992938 10992963 chr2R 10993044 10993069 5 105 4.0 9.0 6.5 0.7 131 chr2R 10992938 intron luna - chr2R 10993004 intron luna - chr2R 10993069 intron luna - chr2R_5_10990001 chr2R_10990001 RAL-892 746 chr2R 11009797 11009845 chr2R 11018987 11019015 roo 17 9186 3.5 2.5 3.0 4.2 9218 chr2R 11009797 intron luna - chr2R 11014406 intron luna - chr2R 11019015 intron luna - chr2R_17_11010001 chr2R_11010001 RAL-892 747 chr2R 11019887 11019893 chr2R 11024953 11024979 jockey 4 5076 1.5 4.5 3.0 1.0 5092 chr2R 11019887 intron luna - chr2R 11022433 intron luna - chr2R 11024979 intron luna - chr2R_4_11020001 chr2R_11020001 RAL-892 748 chr2R 11066464 11066469 chr2R 11066560 11066567 4 97 4.0 9.5 6.8 0.5 103 chr2R 11066464 intron luna - chr2R 11066516 intron luna - chr2R 11066567 intron luna - chr2R_4_11065001 chr2R_11065001 RAL-892 749 chr2R 11110406 11110421 chr2R 11110502 11110517 4 96 0.0 10.5 5.2 0.6 111 chr2R 11110406 intron luna - chr2R 11110462 intron luna - chr2R 11110517 intron luna - chr2R_4_11110001 chr2R_11110001 RAL-892 750 chr2R 11154202 11154233 chr2R 11154342 11154373 8 140 1.0 5.0 3.0 2.0 171 chr2R 11154202 intron CG13229 - chr2R 11154288 intron CG13229 - chr2R 11154373 intron CG13229 - chr2R_8_11150001 chr2R_11150001 RAL-892 751 chr2R 11179251 11179262 chr2R 11179357 11179368 4 106 14.0 2.0 8.0 0.4 117 chr2R 11179251 intron shn + chr2R 11179310 intron shn + chr2R 11179368 intron shn + chr2R_4_11175001 chr2R_11175001 RAL-892 752 chr2R 11179264 11179288 chr2R 11179354 11179379 5 97 9.0 2.0 5.5 0.8 115 chr2R 11179264 intron shn + chr2R 11179322 intron shn + chr2R 11179379 intron shn + chr2R_5_11175001 chr2R_11175001 RAL-892 753 chr2R 11184675 11184687 chr2R 11184772 11184784 6 96 11.0 6.5 8.8 0.6 109 chr2R 11184675 intron shn + chr2R 11184730 intron shn + chr2R 11184784 intron shn + chr2R_6_11180001 chr2R_11180001 RAL-892 754 chr2R 11207808 11207841 chr2R 11208021 11208054 BS 17 211 5.0 8.5 6.8 2.2 246 chr2R 11207808 intron shn + chr2R 11207931 intron shn + chr2R 11208054 intron shn + chr2R_17_11205001 chr2R_11205001 RAL-892 755 chr2R 11263830 11263837 chr2R 11263966 11263973 5 135 0.0 7.0 3.5 1.1 143 chr2R 11263830 intergenic not near genes chr2R 11263902 intergenic not near genes chr2R 11263973 intergenic not near genes chr2R_5_11260001 chr2R_11260001 RAL-892 756 chr2R 11265707 11265724 chr2R 11265809 11265816 6 100 3.0 0.0 1.5 2.4 109 chr2R 11265707 exon Cpr47Ee + chr2R 11265762 exon Cpr47Ee + chr2R 11265816 intron Cpr47Ee + chr2R_6_11265001 chr2R_11265001 RAL-892 757 chr2R 11336562 11336613 chr2R 11336665 11336675 23 96 6.0 6.5 6.2 3.2 113 chr2R 11336562 intergenic sha +,lambdaTry + chr2R 11336618 intergenic sha +,lambdaTry + chr2R 11336675 intergenic lambdaTry +,sha + chr2R_23_11335001 chr2R_11335001 RAL-892 758 chr2R 11344145 11344159 chr2R 11344259 11344275 5 115 0.0 5.5 2.8 1.3 130 chr2R 11344145 intergenic alphaTry - chr2R 11344210 intergenic alphaTry - chr2R 11344275 3` UTR alphaTry - chr2R_5_11340001 chr2R_11340001 RAL-892 759 chr2R 11368009 11368041 chr2R 11368105 11368137 13 96 4.5 5.0 4.8 2.2 128 chr2R 11368009 intron CG13204 + chr2R 11368073 intron CG13204 + chr2R 11368137 intron CG13204 + chr2R_13_11365001 chr2R_11365001 RAL-892 760 chr2R 11415500 11415531 chr2R 11418668 11418694 opus 5 3165 7.0 3.5 5.2 0.8 3194 chr2R 11415500 intron Drip - chr2R 11417097 intron Drip - chr2R 11418694 intron Drip - chr2R_5_11415001 chr2R_11415001 RAL-892 761 chr2R 11415533 11415551 chr2R 11418665 11418720 opus 8 3154 3.5 3.5 3.5 1.8 3187 chr2R 11415533 intron Drip - chr2R 11417126 intron Drip - chr2R 11418720 intron Drip - chr2R_8_11415001 chr2R_11415001 RAL-892 762 chr2R 11472628 11472679 chr2R 11473845 11473896 pogo 13 1215 6.0 8.0 7.0 1.6 1268 chr2R 11472628 intergenic not near genes chr2R 11473262 intergenic not near genes chr2R 11473896 intergenic not near genes chr2R_13_11470001 chr2R_11470001 RAL-892 763 chr2R 11555408 11555425 chr2R 11555763 11555779 7 355 2.0 9.0 5.5 1.1 371 chr2R 11555408 intergenic not near genes chr2R 11555594 intergenic not near genes chr2R 11555779 intergenic not near genes chr2R_7_11555001 chr2R_11555001 RAL-892 764 chr2R 11631379 11631408 chr2R 11631479 11631508 16 100 0.0 5.0 2.5 4.6 129 chr2R 11631379 intron CG9005 - chr2R 11631444 intron CG9005 - chr2R 11631508 intron CG9005 - chr2R_16_11630001 chr2R_11630001 RAL-892 765 chr2R 11863839 11863841 chr2R 11863945 11863948 4 107 14.5 3.5 9.0 0.4 109 chr2R 11863839 intergenic CG42531 + chr2R 11863894 intergenic CG42531 + chr2R 11863948 intergenic CG42531 + chr2R_4_11860001 chr2R_11860001 RAL-892 766 chr2R 11863868 11863887 chr2R 11863975 11863994 10 107 5.5 10.5 8.0 1.1 126 chr2R 11863868 intergenic CG42531 + chr2R 11863931 intergenic CG42531 + chr2R 11863994 intergenic CG42531 + chr2R_10_11860001 chr2R_11860001 RAL-892 767 chr2R 11932553 11932593 chr2R 11932690 11932730 12 136 1.5 6.0 3.8 2.5 177 chr2R 11932553 intergenic not near genes chr2R 11932642 intergenic not near genes chr2R 11932730 intergenic not near genes chr2R_12_11930001 chr2R_11930001 RAL-892 768 chr2R 8518780 8518803 chr2R 12066174 12066188 5 3547383 14.5 10.0 12.2 0.4 3547408 chr2R 8518780 intron mtt - chr2R 10292484 intron CAP + chr2R 12066188 intron CG8888 - chr2R_5_10290001 chr2R_10290001 RAL-892 769 chr2R 12145920 12145964 chr2R 12148607 12148639 11 2678 34.0 29.0 31.5 0.3 2719 chr2R 12145920 exon Hen1 + chr2R 12147280 intron,intron Hen1 +,CG8878 - chr2R 12148639 intron,exon Hen1 +,CG8878 - chr2R_11_12145001 chr2R_12145001 RAL-892 770 chr2R 12185980 12186037 chr2R 12186095 12186152 55 114 8.5 9.5 9.0 5.5 172 chr2R 12185980 intron Cyp6g1 + chr2R 12186066 intron Cyp6g1 + chr2R 12186152 intron Cyp6g1 + chr2R_55_12185001 chr2R_12185001 RAL-892 771 chr2R 12185221 12185237 chr2R 12188127 12188142 10 2907 41.5 164.5 103.0 0.1 2921 chr2R 12185221 3` UTR,exon CG13175 +,CG33964 + chr2R 12186682 exon Cyp6g1 + chr2R 12188142 3` UTR Cyp6g1 + chr2R_10_12185001 chr2R_12185001 RAL-892 772 chr2R 12187473 12187504 chr2R 12190072 12190124 32 2611 88.0 62.0 75.0 0.4 2651 chr2R 12187473 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_32_12185001 chr2R_12185001 RAL-892 773 chr2R 12219692 12219711 chr2R 12219791 12219810 6 99 0.0 6.5 3.2 1.4 118 chr2R 12219692 intergenic not near genes chr2R 12219751 intergenic not near genes chr2R 12219810 intergenic not near genes chr2R_6_12215001 chr2R_12215001 RAL-892 774 chr2R 12284304 12284328 chr2R 12284407 12284413 8 100 0.0 7.5 3.8 1.7 109 chr2R 12284304 intron CG42700 + chr2R 12284358 intron CG42700 + chr2R 12284413 intron CG42700 + chr2R_8_12280001 chr2R_12280001 RAL-892 775 chr2R 12301859 12301907 chr2R 12301956 12302004 25 91 5.5 9.0 7.2 3.0 145 chr2R 12301859 intron CG8850 - chr2R 12301932 intron CG8850 - chr2R 12302004 intron CG8850 - chr2R_25_12300001 chr2R_12300001 RAL-892 776 chr2R 12320711 12320718 chr2R 12320991 12320998 4 280 2.5 5.0 3.8 0.8 287 chr2R 12320711 3` UTR CR44316 - chr2R 12320854 intron CR44316 - chr2R 12320998 intergenic CR44316 -,CG13163 + chr2R_4_12320001 chr2R_12320001 RAL-892 777 chr2R 12334867 12334871 chr2R 12334965 12334969 4 98 6.5 2.5 4.5 0.7 102 chr2R 12334867 intergenic CG8490 + chr2R 12334918 intergenic CG8490 + chr2R 12334969 intergenic CG8490 + chr2R_4_12330001 chr2R_12330001 RAL-892 778 chr2R 12501700 12501704 chr2R 12503866 12503886 Rt1c 4 2178 4.5 7.5 6.0 0.6 2186 chr2R 12501700 intron fdl - chr2R 12502793 intron fdl - chr2R 12503886 intron fdl - chr2R_4_12500001 chr2R_12500001 RAL-892 779 chr2R 12501707 12501720 chr2R 12503865 12503867 Rt1c 5 2168 3.0 7.5 5.2 0.8 2160 chr2R 12501707 intron fdl - chr2R 12502787 intron fdl - chr2R 12503867 intron fdl - chr2R_5_12500001 chr2R_12500001 RAL-892 780 chr2R 12529885 12529937 chr2R 12529998 12530050 8 113 5.0 0.5 2.8 2.1 165 chr2R 12529885 intron fra + chr2R 12529968 intron fra + chr2R 12530050 intron fra + chr2R_8_12525001 chr2R_12525001 RAL-892 781 chr2R 12565545 12565593 chr2R 12565943 12565962 8 380 0.0 4.5 2.2 2.5 417 chr2R 12565545 intergenic not near genes chr2R 12565754 intergenic Cyp301a1 + chr2R 12565962 intergenic Cyp301a1 + chr2R_8_12565001 chr2R_12565001 RAL-892 782 chr2R 12596801 12596851 chr2R 12596998 12597034 11 188 5.0 1.5 3.2 2.6 233 chr2R 12596801 intron Amph + chr2R 12596918 intron Amph + chr2R 12597034 intron Amph + chr2R_11_12595001 chr2R_12595001 RAL-892 783 chr2R 12707498 12707545 chr2R 12715884 12715931 roo 19 8386 2.5 3.0 2.8 5.0 8433 chr2R 12707498 intron CG42663 + chr2R 12711714 intron CG42663 + chr2R 12715931 intron CG42663 + chr2R_19_12710001 chr2R_12710001 RAL-892 784 chr2R 12726304 12726344 chr2R 12726416 12726455 9 111 7.5 6.0 6.8 1.2 151 chr2R 12726304 intron CG42663 + chr2R 12726380 intron CG42663 + chr2R 12726455 intron CG42663 + chr2R_9_12725001 chr2R_12725001 RAL-892 785 chr2R 12789284 12789328 chr2R 12797658 12797687 roo 7 8367 3.5 5.0 4.2 1.3 8403 chr2R 12789284 intron,3` UTR sca +,CR45137 - chr2R 12793486 intron,intron sca +,CR45137 - chr2R 12797687 intron,3` UTR sca +,CR45137 - chr2R_7_12790001 chr2R_12790001 RAL-892 786 chr2R 12819426 12819465 chr2R 12824519 12824558 jockey 7 5092 4.5 4.0 4.2 1.3 5132 chr2R 12819426 intergenic not near genes chr2R 12821992 intergenic not near genes chr2R 12824558 intergenic not near genes chr2R_7_12820001 chr2R_12820001 RAL-892 787 chr2R 12834141 12834188 chr2R 12834244 12834291 15 103 4.5 4.5 4.5 2.7 150 chr2R 12834141 intergenic not near genes chr2R 12834216 intergenic not near genes chr2R 12834291 intergenic not near genes chr2R_15_12830001 chr2R_12830001 RAL-892 788 chr2R 13035932 13035952 chr2R 13036052 13036073 7 121 4.5 0.0 2.2 2.2 141 chr2R 13035932 intergenic not near genes chr2R 13036002 intergenic not near genes chr2R 13036073 intergenic not near genes chr2R_7_13035001 chr2R_13035001 RAL-892 789 chr2R 13136824 13136855 chr2R 13141642 13141673 Doc 10 4815 4.0 3.5 3.8 2.1 4849 chr2R 13136824 exon Cap-G + chr2R 13139248 intron Cap-G + chr2R 13141673 intron Cap-G + chr2R_10_13135001 chr2R_13135001 RAL-892 790 chr2R 13167155 13167186 chr2R 13169481 13169514 7 2328 34.0 24.0 29.0 0.2 2359 chr2R 13167155 intron GLaz - chr2R 13168334 intergenic Spt-I +,CR45142 -,GLaz - chr2R 13169514 exon,3` UTR Spt-I +,CR45142 - chr2R_7_13165001 chr2R_13165001 RAL-892 791 chr2R 13167152 13167194 chr2R 13169518 13169520 4 2337 33.0 19.5 26.2 0.1 2368 chr2R 13167152 intron GLaz - chr2R 13168336 intergenic Spt-I +,CR45142 -,GLaz - chr2R 13169520 exon,3` UTR Spt-I +,CR45142 - chr2R_4_13165001 chr2R_13165001 RAL-892 792 chr2R 13172075 13172120 chr2R 13172166 13172216 6 97 1.0 1.0 1.0 3.0 141 chr2R 13172075 intron AGBE + chr2R 13172146 intron AGBE + chr2R 13172216 intron AGBE + chr2R_6_13170001 chr2R_13170001 RAL-892 793 chr2R 13175175 13175192 chr2R 13175291 13175321 8 120 35.0 35.0 35.0 0.2 146 chr2R 13175175 intergenic CG33137 +,AGBE + chr2R 13175248 intergenic CG33137 +,AGBE + chr2R 13175321 intergenic CG33137 + chr2R_8_13175001 chr2R_13175001 RAL-892 794 chr2R 13248341 13248570 chr2R 13248449 13248671 23 105 4.0 2.5 3.2 5.5 330 chr2R 13248341 intron Mp20 + chr2R 13248506 intron Mp20 + chr2R 13248671 intron Mp20 + chr2R_23_13245001 chr2R_13245001 RAL-892 795 chr2R 13294550 13294600 chr2R 13294710 13294760 13 159 2.0 5.0 3.5 2.9 210 chr2R 13294550 intron Dh31-R - chr2R 13294655 intron Dh31-R - chr2R 13294760 intron Dh31-R - chr2R_13_13290001 chr2R_13290001 RAL-892 796 chr2R 13309648 13309681 chr2R 13309786 13309819 11 138 5.5 4.5 5.0 1.8 171 chr2R 13309648 intergenic not near genes chr2R 13309734 intergenic not near genes chr2R 13309819 intergenic not near genes chr2R_11_13305001 chr2R_13305001 RAL-892 797 chr2R 13403904 13403938 chr2R 13404009 13404043 9 105 2.0 4.0 3.0 2.2 139 chr2R 13403904 intergenic not near genes chr2R 13403974 intergenic not near genes chr2R 13404043 intergenic not near genes chr2R_9_13400001 chr2R_13400001 RAL-892 798 chr2R 13431469 13431519 chr2R 13431568 13431617 20 99 2.5 4.0 3.2 4.8 148 chr2R 13431469 intron CG42321 - chr2R 13431543 intron CG42321 - chr2R 13431617 intron CG42321 - chr2R_20_13430001 chr2R_13430001 RAL-892 799 chr2R 13439090 13439230 chr2R 13439225 13439326 19 141 0.0 0.0 0.0 19.0 236 chr2R 13439090 intergenic CG42321 -,cnn - chr2R 13439208 intergenic cnn -,CG42321 - chr2R 13439326 3` UTR cnn - chr2R_19_13435001 chr2R_13435001 RAL-892 800 chr2R 13547065 13547104 chr2R 13547280 13547319 8 215 2.0 4.0 3.0 2.0 254 chr2R 13547065 intron CG6145 - chr2R 13547192 intron CG6145 - chr2R 13547319 intron CG6145 - chr2R_8_13545001 chr2R_13545001 RAL-892 801 chr2R 13566245 13566276 chr2R 13566344 13566376 9 100 3.5 0.0 1.8 3.2 131 chr2R 13566245 intergenic not near genes chr2R 13566310 intergenic not near genes chr2R 13566376 intergenic not near genes chr2R_9_13565001 chr2R_13565001 RAL-892 802 chr2R 13568157 13568194 chr2R 13568260 13568295 4 101 3.5 0.0 1.8 1.4 138 chr2R 13568157 intergenic not near genes chr2R 13568226 intergenic not near genes chr2R 13568295 intergenic not near genes chr2R_4_13565001 chr2R_13565001 RAL-892 803 chr2R 13580484 13580517 chr2R 13580849 13580887 jockey 10 365 5.0 5.0 5.0 1.7 403 chr2R 13580484 3` UTR CG6191 - chr2R 13580686 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580887 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_10_13580001 chr2R_13580001 RAL-892 804 chr2R 13587673 13587713 chr2R 13587781 13587819 10 107 2.5 1.0 1.8 3.6 146 chr2R 13587673 intron,intron CG6191 -,CG45088 - chr2R 13587746 intron,intron CG6191 -,CG45088 - chr2R 13587819 intron,intron CG6191 -,CG45088 - chr2R_10_13585001 chr2R_13585001 RAL-892 805 chr2R 13652691 13652730 chr2R 13652790 13652797 5 93 7.0 4.0 5.5 0.8 106 chr2R 13652691 intron fas + chr2R 13652744 intron fas + chr2R 13652797 intron fas + chr2R_5_13650001 chr2R_13650001 RAL-892 806 chr2R 13658070 13658101 chr2R 13658167 13658177 4 91 1.5 2.0 1.8 1.4 107 chr2R 13658070 intron fas + chr2R 13658124 intron fas + chr2R 13658177 intron fas + chr2R_4_13655001 chr2R_13655001 RAL-892 807 chr2R 13684249 13684267 chr2R 13684347 13684359 8 97 3.5 0.0 1.8 2.9 110 chr2R 13684249 intron fas + chr2R 13684304 intron fas + chr2R 13684359 intron fas + chr2R_8_13680001 chr2R_13680001 RAL-892 808 chr2R 13709827 13709852 chr2R 13709940 13709965 8 113 3.0 1.5 2.2 2.5 138 chr2R 13709827 intron fas + chr2R 13709896 intron fas + chr2R 13709965 intron fas + chr2R_8_13705001 chr2R_13705001 RAL-892 809 chr2R 13721214 13721225 chr2R 13721304 13721328 4 95 5.5 6.5 6.0 0.6 114 chr2R 13721214 intron fas + chr2R 13721271 intron fas + chr2R 13721328 intron fas + chr2R_4_13720001 chr2R_13720001 RAL-892 810 chr2R 13768990 13769009 chr2R 13769103 13769128 6 118 3.5 10.5 7.0 0.8 138 chr2R 13768990 intergenic not near genes chr2R 13769059 intergenic not near genes chr2R 13769128 intergenic not near genes chr2R_6_13765001 chr2R_13765001 RAL-892 811 chr2R 13770515 13770523 chr2R 13770625 13770633 4 110 0.5 9.0 4.8 0.7 118 chr2R 13770515 intron Cpr50Ca + chr2R 13770574 intron Cpr50Ca + chr2R 13770633 intron Cpr50Ca + chr2R_4_13770001 chr2R_13770001 RAL-892 812 chr2R 13777414 13777586 chr2R 13777523 13777698 21 110 0.0 0.0 0.0 21.0 284 chr2R 13777414 intron Cpr50Ca + chr2R 13777556 intron Cpr50Ca + chr2R 13777698 intron Cpr50Ca + chr2R_21_13775001 chr2R_13775001 RAL-892 813 chr2R 13790311 13790322 chr2R 13790407 13790414 5 95 7.0 0.0 3.5 1.1 103 chr2R 13790311 intergenic not near genes chr2R 13790362 intergenic not near genes chr2R 13790414 intergenic not near genes chr2R_5_13790001 chr2R_13790001 RAL-892 814 chr2R 13825367 13825417 chr2R 13825606 13825656 11 239 5.0 4.5 4.8 1.9 289 chr2R 13825367 exon CG13339 + chr2R 13825512 3` UTR CG13339 + chr2R 13825656 intergenic CG13339 + chr2R_11_13825001 chr2R_13825001 RAL-892 815 chr2R 14018153 14018187 chr2R 14018243 14018263 16 101 4.0 5.5 4.8 2.8 110 chr2R 14018153 intron mam + chr2R 14018208 intron mam + chr2R 14018263 intron mam + chr2R_16_14015001 chr2R_14015001 RAL-892 816 chr2R 14141935 14141946 chr2R 14142060 14142071 6 125 8.5 7.0 7.8 0.7 136 chr2R 14141935 intergenic not near genes chr2R 14142003 intergenic not near genes chr2R 14142071 intergenic not near genes chr2R_6_14140001 chr2R_14140001 RAL-892 817 chr2R 14142423 14142473 chr2R 14142533 14142583 14 109 2.5 3.0 2.8 3.7 160 chr2R 14142423 intergenic not near genes chr2R 14142503 intergenic not near genes chr2R 14142583 intergenic not near genes chr2R_14_14140001 chr2R_14140001 RAL-892 818 chr2R 14277558 14277607 chr2R 14277660 14277709 17 101 5.5 5.5 5.5 2.6 151 chr2R 14277558 5` UTR Ih + chr2R 14277634 5` UTR Ih + chr2R 14277709 5` UTR Ih + chr2R_17_14275001 chr2R_14275001 RAL-892 819 chr2R 14294809 14294854 chr2R 14294909 14294954 18 100 3.5 3.5 3.5 4.0 145 chr2R 14294809 intron Ih + chr2R 14294882 intron Ih + chr2R 14294954 intron Ih + chr2R_18_14290001 chr2R_14290001 RAL-892 820 chr2R 14352696 14352719 chr2R 14352784 14352833 12 108 3.0 8.0 5.5 1.8 137 chr2R 14352696 exon CG8613 + chr2R 14352764 intron CG8613 + chr2R 14352833 intron CG8613 + chr2R_12_14350001 chr2R_14350001 RAL-892 821 chr2R 14357546 14357733 chr2R 14357651 14357893 26 116 11.0 5.5 8.2 2.8 347 chr2R 14357546 intergenic CG8617 -,Arc1 - chr2R 14357720 intergenic Arc1 -,CG8617 - chr2R 14357893 intergenic Arc1 - chr2R_26_14355001 chr2R_14355001 RAL-892 822 chr2R 14372753 14372796 chr2R 14373008 14373051 14 254 3.5 3.0 3.2 3.3 298 chr2R 14372753 3` UTR,exon Obp50b +,Obp50c + chr2R 14372902 3` UTR,exon Obp50b +,Obp50c + chr2R 14373051 intergenic Obp50b +,Obp50c +,Obp50d + chr2R_14_14370001 chr2R_14370001 RAL-892 823 chr2R 14373481 14373532 chr2R 14373588 14373627 9 101 2.0 3.0 2.5 2.6 146 chr2R 14373481 exon Obp50d + chr2R 14373554 exon Obp50d + chr2R 14373627 exon Obp50d + chr2R_9_14370001 chr2R_14370001 RAL-892 824 chr2R 14394220 14394226 chr2R 14399029 14399035 Doc 4 4809 8.0 0.5 4.2 0.8 4815 chr2R 14394220 intergenic not near genes chr2R 14396628 intergenic not near genes chr2R 14399035 intergenic not near genes chr2R_4_14395001 chr2R_14395001 RAL-892 825 chr2R 14400516 14400551 chr2R 14400607 14400650 14 97 3.5 6.5 5.0 2.3 134 chr2R 14400516 intergenic not near genes chr2R 14400583 intergenic not near genes chr2R 14400650 intergenic not near genes chr2R_14_14400001 chr2R_14400001 RAL-892 826 chr2R 14438821 14438849 chr2R 14438925 14438947 4 102 3.0 4.5 3.8 0.8 126 chr2R 14438821 intron Oaz + chr2R 14438884 intron Oaz + chr2R 14438947 intron Oaz + chr2R_4_14435001 chr2R_14435001 RAL-892 827 chr2R 14467296 14467321 chr2R 14476472 14476499 roo 11 9177 1.5 6.5 4.0 2.2 9203 chr2R 14467296 intergenic not near genes chr2R 14471898 intergenic not near genes chr2R 14476499 5` UTR CR44462 + chr2R_11_14470001 chr2R_14470001 RAL-892 828 chr2R 14489198 14489252 chr2R 14489312 14489366 16 114 1.5 2.0 1.8 5.7 168 chr2R 14489198 intron L + chr2R 14489282 intron L + chr2R 14489366 intron L + chr2R_16_14485001 chr2R_14485001 RAL-892 829 chr2R 14497373 14497383 chr2R 14498556 14498565 1360 6 1181 2.0 4.0 3.0 1.5 1192 chr2R 14497373 3` UTR Cpsf160 - chr2R 14497969 intron Cpsf160 - chr2R 14498565 3` UTR Cpsf160 - chr2R_6_14495001 chr2R_14495001 RAL-892 830 chr2R 14497385 14497418 chr2R 14498555 14498604 1360 9 1182 0.0 4.0 2.0 3.0 1219 chr2R 14497385 3` UTR Cpsf160 - chr2R 14497994 intron Cpsf160 - chr2R 14498604 3` UTR Cpsf160 - chr2R_9_14495001 chr2R_14495001 RAL-892 831 chr2R 14514465 14514500 chr2R 14514578 14514613 10 113 7.0 6.0 6.5 1.3 148 chr2R 14514465 intron,intron Cpr51A -,CG30197 + chr2R 14514539 intron,intron Cpr51A -,CG30197 + chr2R 14514613 intron,intron Cpr51A -,CG30197 + chr2R_10_14510001 chr2R_14510001 RAL-892 832 chr2R 14533762 14533771 chr2R 14533861 14533873 4 101 6.5 1.5 4.0 0.8 111 chr2R 14533762 intron ttv + chr2R 14533818 intron ttv + chr2R 14533873 intron ttv + chr2R_4_14530001 chr2R_14530001 RAL-892 833 chr2R 14565541 14565593 chr2R 14565638 14565690 11 96 3.0 5.0 4.0 2.2 149 chr2R 14565541 intron ttv + chr2R 14565616 intron ttv + chr2R 14565690 intron ttv + chr2R_11_14565001 chr2R_14565001 RAL-892 834 chr2R 14566426 14566471 chr2R 14566533 14566578 11 107 2.0 1.0 1.5 4.4 152 chr2R 14566426 intron ttv + chr2R 14566502 intron ttv + chr2R 14566578 intron ttv + chr2R_11_14565001 chr2R_14565001 RAL-892 835 chr2R 14623878 14623893 chr2R 14623994 14624009 8 116 0.0 6.0 3.0 2.0 131 chr2R 14623878 intron Uhg5 + chr2R 14623944 5` UTR Uhg5 + chr2R 14624009 intron,5` UTR Uhg5 +,snoRNA:Me28S-G2703c + chr2R_8_14620001 chr2R_14620001 RAL-892 836 chr2R 14653895 14653902 chr2R 14654005 14654022 5 116 6.0 5.5 5.8 0.7 127 chr2R 14653895 intergenic not near genes chr2R 14653958 intergenic not near genes chr2R 14654022 intergenic not near genes chr2R_5_14650001 chr2R_14650001 RAL-892 837 chr2R 14653904 14653928 chr2R 14654001 14654038 14 112 3.5 4.0 3.8 2.9 134 chr2R 14653904 intergenic not near genes chr2R 14653971 intergenic not near genes chr2R 14654038 intergenic not near genes chr2R_14_14650001 chr2R_14650001 RAL-892 838 chr2R 14729944 14729968 chr2R 14730048 14730072 11 104 8.5 6.0 7.2 1.3 128 chr2R 14729944 intergenic not near genes chr2R 14730008 intergenic not near genes chr2R 14730072 intergenic not near genes chr2R_11_14730001 chr2R_14730001 RAL-892 839 chr2R 14799865 14799896 chr2R 14799961 14799992 13 96 3.0 9.0 6.0 1.9 127 chr2R 14799865 intron kn - chr2R 14799928 intron kn - chr2R 14799992 intron kn - chr2R_13_14795001 chr2R_14795001 RAL-892 840 chr2R 14803457 14803505 chr2R 14803557 14803605 7 100 0.0 2.5 1.2 3.2 148 chr2R 14803457 intron kn - chr2R 14803531 intron kn - chr2R 14803605 intron kn - chr2R_7_14800001 chr2R_14800001 RAL-892 841 chr2R 14826378 14826386 chr2R 14826502 14826510 5 124 4.0 1.5 2.8 1.3 132 chr2R 14826378 intergenic not near genes chr2R 14826444 intergenic not near genes chr2R 14826510 intergenic not near genes chr2R_5_14825001 chr2R_14825001 RAL-892 842 chr2R 14889194 14889239 chr2R 14897822 14897844 Max-element 12 8624 6.0 0.0 3.0 3.0 8650 chr2R 14889194 intergenic Cyp6a8 - chr2R 14893519 intergenic not near genes chr2R 14897844 intergenic not near genes chr2R_12_14890001 chr2R_14890001 RAL-892 843 chr2R 14898547 14898584 chr2R 14898653 14898690 14 105 4.5 4.0 4.2 2.7 143 chr2R 14898547 intergenic not near genes chr2R 14898618 intergenic not near genes chr2R 14898690 intergenic not near genes chr2R_14_14895001 chr2R_14895001 RAL-892 844 chr2R 14911680 14911722 chr2R 14911823 14911865 16 143 5.5 3.5 4.5 2.9 185 chr2R 14911680 intron CG10249 - chr2R 14911772 intron CG10249 - chr2R 14911865 intron CG10249 - chr2R_16_14910001 chr2R_14910001 RAL-892 845 chr2R 14930836 14930854 chr2R 14930949 14930967 4 113 0.0 0.0 0.0 4.0 131 chr2R 14930836 intron CG10253 - chr2R 14930902 intron CG10253 - chr2R 14930967 intron CG10253 - chr2R_4_14930001 chr2R_14930001 RAL-892 846 chr2R 14934104 14934141 chr2R 14934197 14934238 9 94 1.5 4.5 3.0 2.2 134 chr2R 14934104 intron CG10253 - chr2R 14934171 intron CG10253 - chr2R 14934238 intron CG10253 - chr2R_9_14930001 chr2R_14930001 RAL-892 847 chr2R 14985431 14985478 chr2R 14985527 14985565 8 82 0.0 2.0 1.0 4.0 134 chr2R 14985431 intron pcs + chr2R 14985498 intron pcs + chr2R 14985565 intron pcs + chr2R_8_14985001 chr2R_14985001 RAL-892 848 chr2R 15004711 15004756 chr2R 15005060 15005105 jockey 15 349 7.5 7.0 7.2 1.8 394 chr2R 15004711 intergenic not near genes chr2R 15004908 intergenic not near genes chr2R 15005105 intergenic not near genes chr2R_15_15000001 chr2R_15000001 RAL-892 849 chr2R 15015442 15015485 chr2R 15022880 15022929 mdg1 14 7442 2.0 2.0 2.0 4.7 7487 chr2R 15015442 intron hbs + chr2R 15019186 intron hbs + chr2R 15022929 intron hbs + chr2R_14_15015001 chr2R_15015001 RAL-892 850 chr2R 15027485 15027520 chr2R 15027582 15027628 10 97 2.5 5.5 4.0 2.0 143 chr2R 15027485 intron hbs + chr2R 15027556 intron hbs + chr2R 15027628 intron hbs + chr2R_10_15025001 chr2R_15025001 RAL-892 851 chr2R 15065603 15065647 chr2R 15065696 15065745 7 93 1.0 2.0 1.5 2.8 142 chr2R 15065603 intergenic not near genes chr2R 15065674 intergenic not near genes chr2R 15065745 intergenic not near genes chr2R_7_15065001 chr2R_15065001 RAL-892 852 chr2R 15073108 15073119 chr2R 15073211 15073222 4 103 5.0 2.0 3.5 0.9 114 chr2R 15073108 intergenic not near genes chr2R 15073165 intergenic not near genes chr2R 15073222 intergenic not near genes chr2R_4_15070001 chr2R_15070001 RAL-892 853 chr2R 15084962 15085005 chr2R 15092031 15092062 297 10 7068 3.0 2.0 2.5 2.9 7100 chr2R 15084962 intergenic not near genes chr2R 15088512 intergenic not near genes chr2R 15092062 5` UTR CR44457 + chr2R_10_15085001 chr2R_15085001 RAL-892 854 chr2R 15119297 15119348 chr2R 15127798 15127843 Tirant 8 8496 4.0 7.5 5.8 1.2 8546 chr2R 15119297 intron chn + chr2R 15123570 intron chn + chr2R 15127843 intron chn + chr2R_8_15120001 chr2R_15120001 RAL-892 855 chr2R 15137963 15138002 chr2R 15138055 15138085 10 96 2.0 0.0 1.0 5.0 122 chr2R 15137963 intron chn + chr2R 15138024 intron chn + chr2R 15138085 intron chn + chr2R_10_15135001 chr2R_15135001 RAL-892 856 chr2R 15175795 15175829 chr2R 15176892 15176926 6 1097 5.0 3.0 4.0 1.2 1131 chr2R 15175795 intron igl + chr2R 15176360 intron igl + chr2R 15176926 intron igl + chr2R_6_15175001 chr2R_15175001 RAL-892 857 chr2R 15175831 15175835 chr2R 15176888 15176932 5 1088 4.5 3.0 3.8 1.0 1101 chr2R 15175831 intron igl + chr2R 15176382 intron igl + chr2R 15176932 intron igl + chr2R_5_15175001 chr2R_15175001 RAL-892 858 chr2R 15230360 15230368 chr2R 15230667 15230675 9 307 26.5 0.5 13.5 0.6 315 chr2R 15230360 intron,5` UTR Fs -,CR44370 + chr2R 15230518 intron,5` UTR Fs -,CR44370 + chr2R 15230675 intron,5` UTR Fs -,CR44370 + chr2R_9_15230001 chr2R_15230001 RAL-892 859 chr2R 15259046 15259084 chr2R 15259150 15259188 10 104 6.0 4.5 5.2 1.6 142 chr2R 15259046 intron ItgalphaPS4 + chr2R 15259117 intron ItgalphaPS4 + chr2R 15259188 intron ItgalphaPS4 + chr2R_10_15255001 chr2R_15255001 RAL-892 860 chr2R 15294656 15294709 chr2R 15294758 15294771 15 95 4.0 2.0 3.0 3.8 115 chr2R 15294656 intron,3` UTR Trpm -,CR44241 - chr2R 15294714 intron,3` UTR Trpm -,CR44241 - chr2R 15294771 intron,3` UTR Trpm -,CR44241 - chr2R_15_15290001 chr2R_15290001 RAL-892 861 chr2R 15296154 15296171 chr2R 15296251 15296254 5 96 3.5 4.5 4.0 1.0 100 chr2R 15296154 intron Trpm - chr2R 15296204 intron Trpm - chr2R 15296254 intron Trpm - chr2R_5_15295001 chr2R_15295001 RAL-892 862 chr2R 15330188 15330235 chr2R 15330342 15330389 13 154 2.0 2.5 2.2 4.1 201 chr2R 15330188 intergenic CR44371 - chr2R 15330288 intergenic CR44371 - chr2R 15330389 intergenic CR44371 - chr2R_13_15330001 chr2R_15330001 RAL-892 863 chr2R 15375347 15375361 chr2R 15376172 15376198 4 832 0.5 5.5 3.0 1.0 851 chr2R 15375347 intergenic not near genes chr2R 15375772 intergenic not near genes chr2R 15376198 intergenic dup - chr2R_4_15375001 chr2R_15375001 RAL-892 864 chr2R 15393280 15393307 chr2R 15393377 15393403 11 97 5.0 6.0 5.5 1.7 123 chr2R 15393280 intergenic not near genes chr2R 15393342 intergenic not near genes chr2R 15393403 intergenic not near genes chr2R_11_15390001 chr2R_15390001 RAL-892 865 chr2R 15393312 15393319 chr2R 15393362 15393416 5 84 4.5 4.5 4.5 0.9 104 chr2R 15393312 intergenic not near genes chr2R 15393364 intergenic not near genes chr2R 15393416 intergenic not near genes chr2R_5_15390001 chr2R_15390001 RAL-892 866 chr2R 15405180 15405201 chr2R 15405279 15405300 8 99 0.0 5.0 2.5 2.3 120 chr2R 15405180 intron CG43729 + chr2R 15405240 intron CG43729 + chr2R 15405300 intron CG43729 + chr2R_8_15405001 chr2R_15405001 RAL-892 867 chr2R 15497650 15497668 chr2R 15497748 15497751 8 94 6.5 2.5 4.5 1.5 101 chr2R 15497650 intergenic CG12964 - chr2R 15497700 intergenic CG12964 - chr2R 15497751 intergenic not near genes chr2R_8_15495001 chr2R_15495001 RAL-892 868 chr2R 15702941 15702970 chr2R 15703038 15703067 8 96 4.5 5.0 4.8 1.4 126 chr2R 15702941 intergenic not near genes chr2R 15703004 intergenic not near genes chr2R 15703067 intergenic not near genes chr2R_8_15700001 chr2R_15700001 RAL-892 869 chr2R 15794875 15794886 chr2R 15794985 15794996 5 110 0.0 0.0 0.0 5.0 121 chr2R 15794875 intron,5` UTR Zasp52 -,tun + chr2R 15794936 intron,5` UTR Zasp52 -,tun + chr2R 15794996 intron,intron Zasp52 -,tun + chr2R_5_15790001 chr2R_15790001 RAL-892 870 chr2R 15833517 15833554 chr2R 15833612 15833624 6 95 4.0 3.0 3.5 1.3 107 chr2R 15833517 intron,intron tun +,Poxn - chr2R 15833570 intron,intron tun +,Poxn - chr2R 15833624 intron,intron tun +,Poxn - chr2R_6_15830001 chr2R_15830001 RAL-892 871 chr2R 15848311 15848345 chr2R 15848408 15848442 6 97 0.5 0.0 0.2 5.0 131 chr2R 15848311 intron tun + chr2R 15848376 intron tun + chr2R 15848442 intron tun + chr2R_6_15845001 chr2R_15845001 RAL-892 872 chr2R 16061709 16061712 chr2R 16064362 16064365 Burdock 4 2653 11.0 4.0 7.5 0.5 2656 chr2R 16061709 intergenic not near genes chr2R 16063037 intergenic not near genes chr2R 16064365 intergenic not near genes chr2R_4_16060001 chr2R_16060001 RAL-892 873 chr2R 16074878 16074916 chr2R 16074961 16074971 9 83 3.5 0.0 1.8 3.2 93 chr2R 16074878 intergenic not near genes chr2R 16074924 intergenic not near genes chr2R 16074971 intergenic not near genes chr2R_9_16070001 chr2R_16070001 RAL-892 874 chr2R 16245408 16245430 chr2R 16245521 16245544 8 113 0.5 5.0 2.8 2.1 136 chr2R 16245408 intron CngA - chr2R 16245476 intron CngA - chr2R 16245544 intron CngA - chr2R_8_16245001 chr2R_16245001 RAL-892 875 chr2R 16307866 16307905 chr2R 16307963 16308002 16 97 3.5 4.0 3.8 3.3 136 chr2R 16307866 5` UTR Nox + chr2R 16307934 5` UTR Nox + chr2R 16308002 5` UTR Nox + chr2R_16_16305001 chr2R_16305001 RAL-892 876 chr2R 16352846 16352858 chr2R 16352949 16352961 8 103 5.5 4.5 5.0 1.3 115 chr2R 16352846 intergenic not near genes chr2R 16352904 intergenic not near genes chr2R 16352961 intergenic not near genes chr2R_8_16350001 chr2R_16350001 RAL-892 877 chr2R 16489250 16489292 chr2R 16489354 16489396 12 104 6.0 5.0 5.5 1.8 146 chr2R 16489250 intergenic CG33459 + chr2R 16489323 intergenic CG33459 + chr2R 16489396 intergenic CG33459 + chr2R_12_16485001 chr2R_16485001 RAL-892 878 chr2R 16518030 16518073 chr2R 16518126 16518169 9 95 3.5 3.0 3.2 2.1 139 chr2R 16518030 intron Sema-2a + chr2R 16518100 intron Sema-2a + chr2R 16518169 intron Sema-2a + chr2R_9_16515001 chr2R_16515001 RAL-892 879 chr2R 16520561 16520588 chr2R 16520725 16520750 6 168 6.0 0.5 3.2 1.4 189 chr2R 16520561 intron Sema-2a + chr2R 16520656 intron Sema-2a + chr2R 16520750 intron Sema-2a + chr2R_6_16520001 chr2R_16520001 RAL-892 880 chr2R 16538071 16538084 chr2R 16538185 16538198 8 114 3.0 3.0 3.0 2.0 127 chr2R 16538071 intergenic not near genes chr2R 16538134 intergenic not near genes chr2R 16538198 intergenic not near genes chr2R_8_16535001 chr2R_16535001 RAL-892 881 chr2R 16539630 16539664 chr2R 16544853 16544893 copia 12 5228 6.5 4.0 5.2 1.9 5263 chr2R 16539630 intergenic not near genes chr2R 16542262 intergenic not near genes chr2R 16544893 intergenic not near genes chr2R_12_16540001 chr2R_16540001 RAL-892 882 chr2R 16551435 16551488 chr2R 16551531 16551583 22 92 5.0 4.0 4.5 4.0 148 chr2R 16551435 intergenic not near genes chr2R 16551509 intergenic not near genes chr2R 16551583 intergenic not near genes chr2R_22_16550001 chr2R_16550001 RAL-892 883 chr2R 16617057 16617075 chr2R 16617156 16617173 9 98 0.5 8.0 4.2 1.7 116 chr2R 16617057 intron CG5065 + chr2R 16617115 intron CG5065 + chr2R 16617173 intron CG5065 + chr2R_9_16615001 chr2R_16615001 RAL-892 884 chr2R 16669070 16669118 chr2R 16670985 16671018 13 1902 32.5 28.5 30.5 0.4 1948 chr2R 16669070 intergenic not near genes chr2R 16670044 intergenic CG34457 + chr2R 16671018 exon CG34457 + chr2R_13_16670001 chr2R_16670001 RAL-892 885 chr2R 16713055 16713065 chr2R 16713159 16713169 6 104 0.5 3.0 1.8 2.1 114 chr2R 16713055 intron CG30463 - chr2R 16713112 intron CG30463 - chr2R 16713169 intron CG30463 - chr2R_6_16710001 chr2R_16710001 RAL-892 886 chr2R 16722109 16722140 chr2R 16722372 16722403 6 261 2.0 7.5 4.8 1.0 294 chr2R 16722109 intron CG30463 - chr2R 16722256 intron CG30463 - chr2R 16722403 intron CG30463 - chr2R_6_16720001 chr2R_16720001 RAL-892 887 chr2R 16723912 16723947 chr2R 16724010 16724047 12 99 5.0 8.0 6.5 1.6 135 chr2R 16723912 intron CG30463 - chr2R 16723980 intron CG30463 - chr2R 16724047 intron CG30463 - chr2R_12_16720001 chr2R_16720001 RAL-892 888 chr2R 16775636 16775670 chr2R 16775923 16775957 8 287 1.5 8.0 4.8 1.4 321 chr2R 16775636 3` UTR Arp53D + chr2R 16775796 intergenic Arp53D + chr2R 16775957 intergenic Arp53D + chr2R_8_16775001 chr2R_16775001 RAL-892 889 chr2R 16787454 16787499 chr2R 16787556 16787601 14 101 2.5 2.5 2.5 4.0 147 chr2R 16787454 intron CG5522 + chr2R 16787528 intron CG5522 + chr2R 16787601 intron CG5522 + chr2R_14_16785001 chr2R_16785001 RAL-892 890 chr2R 16828278 16828299 chr2R 16828375 16828402 5 104 2.5 0.0 1.2 2.3 124 chr2R 16828278 intergenic not near genes chr2R 16828340 intergenic not near genes chr2R 16828402 intergenic not near genes chr2R_5_16825001 chr2R_16825001 RAL-892 891 chr2R 16838593 16838707 chr2R 16838689 16838823 16 106 0.0 0.0 0.0 16.0 230 chr2R 16838593 5` UTR CR43650 + chr2R 16838708 5` UTR CR43650 + chr2R 16838823 5` UTR CR43650 + chr2R_16_16835001 chr2R_16835001 RAL-892 892 chr2R 16880025 16880058 chr2R 16880122 16880155 4 96 4.0 0.5 2.2 1.2 130 chr2R 16880025 intron CG8910 - chr2R 16880090 intron CG8910 - chr2R 16880155 intron CG8910 - chr2R_4_16880001 chr2R_16880001 RAL-892 893 chr2R 16910216 16910243 chr2R 16910330 16910362 11 117 5.5 4.5 5.0 1.8 146 chr2R 16910216 intergenic not near genes chr2R 16910289 intergenic not near genes chr2R 16910362 intergenic not near genes chr2R_11_16910001 chr2R_16910001 RAL-892 894 chr2R 16921978 16922015 chr2R 16922107 16922144 13 129 29.0 28.5 28.8 0.4 166 chr2R 16921978 intergenic not near genes chr2R 16922061 intergenic not near genes chr2R 16922144 intergenic not near genes chr2R_13_16920001 chr2R_16920001 RAL-892 895 chr2R 17147227 17147265 chr2R 17152278 17152316 jockey 19 5051 6.0 5.5 5.8 2.8 5089 chr2R 17147227 intergenic not near genes chr2R 17149772 intergenic not near genes chr2R 17152316 intergenic not near genes chr2R_19_17145001 chr2R_17145001 RAL-892 896 chr2R 17161337 17161354 chr2R 17161564 17161567 10 225 5.0 0.0 2.5 2.9 230 chr2R 17161337 intergenic not near genes chr2R 17161452 intergenic not near genes chr2R 17161567 intergenic not near genes chr2R_10_17160001 chr2R_17160001 RAL-892 897 chr2R 17176362 17176386 chr2R 17182572 17182596 diver 8 6210 0.0 12.0 6.0 1.1 6234 chr2R 17176362 intergenic not near genes chr2R 17179479 intergenic not near genes chr2R 17182596 intergenic not near genes chr2R_8_17175001 chr2R_17175001 RAL-892 898 chr2R 17236495 17236527 chr2R 17241718 17241751 copia 6 5224 3.5 5.0 4.2 1.2 5256 chr2R 17236495 intron mbl + chr2R 17239123 intron mbl + chr2R 17241751 intron mbl + chr2R_6_17235001 chr2R_17235001 RAL-892 899 chr2R 17299757 17299778 chr2R 17299957 17299957 4 202 1.5 2.0 1.8 1.4 200 chr2R 17299757 intron mbl + chr2R 17299857 intron mbl + chr2R 17299957 intron mbl + chr2R_4_17295001 chr2R_17295001 RAL-892 900 chr2R 17419920 17419963 chr2R 17420024 17420061 6 102 0.0 3.5 1.8 2.1 141 chr2R 17419920 5` UTR cnk - chr2R 17419990 5` UTR cnk - chr2R 17420061 intergenic cnk -,l(2)k01209 + chr2R_6_17415001 chr2R_17415001 RAL-892 901 chr2R 17443761 17443800 chr2R 17443857 17443896 19 96 4.0 5.5 4.8 3.3 135 chr2R 17443761 intron EDTP - chr2R 17443828 intron EDTP - chr2R 17443896 intron EDTP - chr2R_19_17440001 chr2R_17440001 RAL-892 902 chr2R 17470330 17470354 chr2R 17470434 17470458 8 104 2.5 1.5 2.0 2.7 128 chr2R 17470330 intron qkr54B + chr2R 17470394 intron qkr54B + chr2R 17470458 intron qkr54B + chr2R_8_17470001 chr2R_17470001 RAL-892 903 chr2R 17485898 17485953 chr2R 17490680 17490733 F-element 10 4781 4.5 3.5 4.0 2.0 4835 chr2R 17485898 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488316 intron NT5E-2 + chr2R 17490733 intron NT5E-2 + chr2R_10_17485001 chr2R_17485001 RAL-892 904 chr2R 17500640 17500690 chr2R 17500736 17500786 8 92 4.0 4.0 4.0 1.6 146 chr2R 17500640 intergenic not near genes chr2R 17500713 intergenic not near genes chr2R 17500786 intergenic not near genes chr2R_8_17500001 chr2R_17500001 RAL-892 905 chr2R 17679582 17679603 chr2R 17679729 17679750 4 147 0.0 2.0 1.0 2.0 168 chr2R 17679582 intron Sema-1b - chr2R 17679666 intron Sema-1b - chr2R 17679750 intron Sema-1b - chr2R_4_17675001 chr2R_17675001 RAL-892 906 chr2R 17782344 17782394 chr2R 17783567 17783617 pogo 19 1223 4.5 4.0 4.2 3.7 1273 chr2R 17782344 intergenic CG33981 -,fab1 - chr2R 17782980 intergenic not near genes chr2R 17783617 intergenic mir-31a - chr2R_19_17780001 chr2R_17780001 RAL-892 907 chr2R 17784018 17784031 chr2R 17784272 17784285 pogo 11 257 6.0 3.0 4.5 2.0 267 chr2R 17784018 intergenic mir-31a - chr2R 17784152 intergenic mir-31a - chr2R 17784285 intergenic mir-31a - chr2R_11_17780001 chr2R_17780001 RAL-892 908 chr2R 17807933 17807958 chr2R 17808051 17808076 4 118 5.0 3.0 4.0 0.8 143 chr2R 17807933 intron grh + chr2R 17808004 intron grh + chr2R 17808076 intron grh + chr2R_4_17805001 chr2R_17805001 RAL-892 909 chr2R 17849785 17849821 chr2R 17849962 17849998 11 177 6.0 2.5 4.2 2.1 213 chr2R 17849785 intron olf186-F + chr2R 17849892 intron olf186-F + chr2R 17849998 intron olf186-F + chr2R_11_17845001 chr2R_17845001 RAL-892 910 chr2R 17895404 17895425 chr2R 17895502 17895504 4 92 6.0 2.5 4.2 0.8 100 chr2R 17895404 intron,exon Elk +,CG14491 + chr2R 17895454 intron,exon Elk +,CG14491 + chr2R 17895504 intron,exon Elk +,CG14491 + chr2R_4_17895001 chr2R_17895001 RAL-892 911 chr2R 17918170 17918181 chr2R 17918237 17918274 4 88 4.5 2.0 3.2 1.0 104 chr2R 17918170 intron Elk + chr2R 17918222 intron Elk + chr2R 17918274 intron Elk + chr2R_4_17915001 chr2R_17915001 RAL-892 912 chr2R 17921434 17921470 chr2R 17921536 17921572 10 102 1.5 6.0 3.8 2.1 138 chr2R 17921434 intron Elk + chr2R 17921503 intron Elk + chr2R 17921572 intron Elk + chr2R_10_17920001 chr2R_17920001 RAL-892 913 chr2R 17968577 17968632 chr2R 17968701 17968754 25 121 0.5 5.0 2.8 6.6 177 chr2R 17968577 intergenic not near genes chr2R 17968666 intergenic not near genes chr2R 17968754 intergenic not near genes chr2R_25_17965001 chr2R_17965001 RAL-892 914 chr2R 17982911 17982921 chr2R 17983015 17983026 4 104 4.5 1.5 3.0 1.0 115 chr2R 17982911 intron dpr13 - chr2R 17982968 intron dpr13 - chr2R 17983026 intron dpr13 - chr2R_4_17980001 chr2R_17980001 RAL-892 915 chr2R 17982924 17982953 chr2R 17983008 17983044 9 101 1.5 1.0 1.2 4.1 120 chr2R 17982924 intron dpr13 - chr2R 17982984 intron dpr13 - chr2R 17983044 intron dpr13 - chr2R_9_17980001 chr2R_17980001 RAL-892 916 chr2R 17997062 17997074 chr2R 17997177 17997195 10 123 28.0 12.0 20.0 0.5 133 chr2R 17997062 intron dpr13 - chr2R 17997128 intron dpr13 - chr2R 17997195 intron dpr13 - chr2R_10_17995001 chr2R_17995001 RAL-892 917 chr2R 18003208 18003223 chr2R 18003301 18003319 5 94 5.5 6.5 6.0 0.7 111 chr2R 18003208 intron dpr13 - chr2R 18003264 intron dpr13 - chr2R 18003319 intron dpr13 - chr2R_5_18000001 chr2R_18000001 RAL-892 918 chr2R 18045651 18045687 chr2R 18046023 18046059 jockey 22 372 5.5 7.0 6.2 3.1 408 chr2R 18045651 intergenic not near genes chr2R 18045855 intergenic not near genes chr2R 18046059 intergenic CG5767 - chr2R_22_18045001 chr2R_18045001 RAL-892 919 chr2R 18073850 18073892 chr2R 18073954 18073996 13 101 5.0 6.5 5.8 1.9 146 chr2R 18073850 intron CG34386 + chr2R 18073923 intron CG34386 + chr2R 18073996 intron CG34386 + chr2R_13_18070001 chr2R_18070001 RAL-892 920 chr2R 18089176 18089227 chr2R 18089308 18089357 4 131 0.0 3.5 1.8 1.4 181 chr2R 18089176 intron CG34386 + chr2R 18089266 intron CG34386 + chr2R 18089357 intron CG34386 + chr2R_4_18085001 chr2R_18085001 RAL-892 921 chr2R 18111666 18111715 chr2R 18115554 18115601 F-element 15 3887 4.0 4.0 4.0 3.0 3935 chr2R 18111666 intergenic not near genes chr2R 18113634 intergenic not near genes chr2R 18115601 intergenic not near genes chr2R_15_18110001 chr2R_18110001 RAL-892 922 chr2R 18124326 18124353 chr2R 18124423 18124440 9 95 5.5 7.0 6.2 1.2 114 chr2R 18124326 intron stau - chr2R 18124383 intron stau - chr2R 18124440 intron stau - chr2R_9_18120001 chr2R_18120001 RAL-892 923 chr2R 18124355 18124366 chr2R 18124419 18124460 7 90 5.0 6.5 5.8 1.0 105 chr2R 18124355 intron stau - chr2R 18124408 intron stau - chr2R 18124460 intron stau - chr2R_7_18120001 chr2R_18120001 RAL-892 924 chr2R 18207310 18207349 chr2R 18207404 18207457 4 93 3.5 3.0 3.2 1.0 147 chr2R 18207310 intergenic CG30114 + chr2R 18207384 intergenic CG30114 + chr2R 18207457 intergenic CG30114 + chr2R_4_18205001 chr2R_18205001 RAL-892 925 chr2R 18219775 18219825 chr2R 18219881 18219931 16 105 2.5 1.5 2.0 5.3 156 chr2R 18219775 intergenic not near genes chr2R 18219853 intergenic not near genes chr2R 18219931 intergenic not near genes chr2R_16_18215001 chr2R_18215001 RAL-892 926 chr2R 18308264 18308318 chr2R 18308390 18308444 15 125 6.0 2.0 4.0 3.0 180 chr2R 18308264 intron sbb - chr2R 18308354 intron sbb - chr2R 18308444 intron sbb - chr2R_15_18305001 chr2R_18305001 RAL-892 927 chr2R 18338410 18338460 chr2R 18338551 18338586 20 137 3.0 4.0 3.5 4.4 176 chr2R 18338410 intron sbb - chr2R 18338498 intron sbb - chr2R 18338586 intron sbb - chr2R_20_18335001 chr2R_18335001 RAL-892 928 chr2R 18340910 18340940 chr2R 18341371 18341385 10 459 6.0 4.5 5.2 1.6 475 chr2R 18340910 intron sbb - chr2R 18341148 intron sbb - chr2R 18341385 intron sbb - chr2R_10_18340001 chr2R_18340001 RAL-892 929 chr2R 18358373 18358416 chr2R 18372605 18372643 roo 16 14231 4.5 4.0 4.2 3.1 14270 chr2R 18358373 intergenic not near genes chr2R 18365508 intergenic not near genes chr2R 18372643 intergenic not near genes chr2R_16_18365001 chr2R_18365001 RAL-892 930 chr2R 18390851 18390884 chr2R 18390959 18390992 11 106 3.0 1.0 2.0 3.7 141 chr2R 18390851 intergenic CG15068 - chr2R 18390922 intergenic CG15068 - chr2R 18390992 intergenic CG15068 - chr2R_11_18390001 chr2R_18390001 RAL-892 931 chr2R 18405731 18405787 chr2R 18405832 18405880 8 99 2.5 0.0 1.2 3.6 149 chr2R 18405731 intergenic GstE6 +,GstE5 + chr2R 18405806 intergenic GstE6 +,GstE5 + chr2R 18405880 intergenic GstE6 + chr2R_8_18405001 chr2R_18405001 RAL-892 932 chr2R 18480440 18480487 chr2R 18480567 18480614 5 127 0.0 0.0 0.0 5.0 174 chr2R 18480440 intron CG30116 - chr2R 18480527 intron CG30116 - chr2R 18480614 intron CG30116 - chr2R_5_18480001 chr2R_18480001 RAL-892 933 chr2R 18503381 18503386 chr2R 18503478 18503483 4 97 0.0 4.5 2.2 1.2 102 chr2R 18503381 intergenic GstE11 + chr2R 18503432 intergenic GstE11 + chr2R 18503483 intergenic GstE11 + chr2R_4_18500001 chr2R_18500001 RAL-892 934 chr2R 18511603 18511613 chr2R 18511706 18511719 5 105 6.0 6.0 6.0 0.7 116 chr2R 18511603 intergenic not near genes chr2R 18511661 intergenic not near genes chr2R 18511719 intergenic not near genes chr2R_5_18510001 chr2R_18510001 RAL-892 935 chr2R 18513430 18513466 chr2R 18513918 18513954 15 488 4.0 4.0 4.0 3.0 524 chr2R 18513430 intergenic not near genes chr2R 18513692 intergenic not near genes chr2R 18513954 intergenic not near genes chr2R_15_18510001 chr2R_18510001 RAL-892 936 chr2R 18526580 18526600 chr2R 18526682 18526702 5 100 6.5 3.5 5.0 0.8 122 chr2R 18526580 intergenic CG43066 + chr2R 18526641 intergenic CG43066 + chr2R 18526702 intergenic CG43066 + chr2R_5_18525001 chr2R_18525001 RAL-892 937 chr2R 18575794 18575831 chr2R 18581998 18582039 3S18 9 6204 2.5 6.0 4.2 1.7 6245 chr2R 18575794 intron GEFmeso - chr2R 18578916 intron GEFmeso - chr2R 18582039 intron GEFmeso - chr2R_9_18575001 chr2R_18575001 RAL-892 938 chr2R 18590852 18590901 chr2R 18600023 18600073 roo 5 9169 2.5 2.5 2.5 1.4 9221 chr2R 18590852 intron GEFmeso - chr2R 18595462 intron GEFmeso - chr2R 18600073 intron GEFmeso - chr2R_5_18595001 chr2R_18595001 RAL-892 939 chr2R 18605122 18605158 chr2R 18605234 18605266 11 111 5.0 5.5 5.2 1.8 144 chr2R 18605122 intron GEFmeso - chr2R 18605194 intron GEFmeso - chr2R 18605266 intron GEFmeso - chr2R_11_18605001 chr2R_18605001 RAL-892 940 chr2R 18692883 18692914 chr2R 18692990 18693021 16 106 4.5 3.5 4.0 3.2 138 chr2R 18692883 intron Sik3 + chr2R 18692952 intron Sik3 + chr2R 18693021 intron Sik3 + chr2R_16_18690001 chr2R_18690001 RAL-892 941 chr2R 18778593 18778608 chr2R 18778711 18778725 5 118 6.0 0.0 3.0 1.2 132 chr2R 18778593 intergenic not near genes chr2R 18778659 intergenic not near genes chr2R 18778725 intergenic not near genes chr2R_5_18775001 chr2R_18775001 RAL-892 942 chr2R 18835876 18835897 chr2R 18835978 18835999 11 102 7.0 0.0 3.5 2.4 123 chr2R 18835876 intron CG15083 + chr2R 18835938 intron CG15083 + chr2R 18835999 intron CG15083 + chr2R_11_18835001 chr2R_18835001 RAL-892 943 chr2R 18862290 18862409 chr2R 18862397 18862514 6 112 0.0 0.0 0.0 6.0 224 chr2R 18862290 intergenic Jheh3 - chr2R 18862402 intergenic Jheh3 -,CG43069 + chr2R 18862514 intergenic CG43069 +,Jheh3 - chr2R_6_18860001 chr2R_18860001 RAL-892 944 chr2R 18953142 18953192 chr2R 18953248 18953299 19 106 7.0 3.5 5.2 3.1 157 chr2R 18953142 intron sano + chr2R 18953220 intron sano + chr2R 18953299 intron sano + chr2R_19_18950001 chr2R_18950001 RAL-892 945 chr2R 19026028 19026045 chr2R 19026149 19026165 6 121 10.0 0.5 5.2 1.0 137 chr2R 19026028 intron 5-HT1B - chr2R 19026096 intron 5-HT1B - chr2R 19026165 intron 5-HT1B - chr2R_6_19025001 chr2R_19025001 RAL-892 946 chr2R 19067714 19067745 chr2R 19067810 19067841 11 95 4.5 4.5 4.5 2.0 127 chr2R 19067714 intron 5-HT1A + chr2R 19067778 intron 5-HT1A + chr2R 19067841 intron 5-HT1A + chr2R_11_19065001 chr2R_19065001 RAL-892 947 chr2R 19153908 19153924 chr2R 19154042 19154063 6 136 1.5 6.0 3.8 1.2 155 chr2R 19153908 intron ena + chr2R 19153986 intron ena + chr2R 19154063 intron ena + chr2R_6_19150001 chr2R_19150001 RAL-892 948 chr2R 19385086 19385111 chr2R 19385185 19385210 5 99 0.0 3.0 1.5 2.0 124 chr2R 19385086 intergenic CG10073 + chr2R 19385148 intergenic CG10073 + chr2R 19385210 intergenic CG10073 + chr2R_5_19385001 chr2R_19385001 RAL-892 949 chr2R 19466693 19466738 chr2R 19466836 19466881 4 143 2.0 2.0 2.0 1.3 188 chr2R 19466693 intron par-1 + chr2R 19466787 intron par-1 + chr2R 19466881 intron par-1 + chr2R_4_19465001 chr2R_19465001 RAL-892 950 chr2R 19602014 19602019 chr2R 19602117 19602123 4 104 6.0 5.5 5.8 0.6 109 chr2R 19602014 intron sm - chr2R 19602068 intron sm - chr2R 19602123 intron sm - chr2R_4_19600001 chr2R_19600001 RAL-892 951 chr2R 19602020 19602055 chr2R 19602110 19602139 8 99 3.0 5.5 4.2 1.5 119 chr2R 19602020 intron sm - chr2R 19602080 intron sm - chr2R 19602139 intron sm - chr2R_8_19600001 chr2R_19600001 RAL-892 952 chr2R 19637916 19638063 chr2R 19638051 19638160 7 119 3.0 3.0 3.0 1.8 244 chr2R 19637916 3` UTR CG43277 + chr2R 19638038 3` UTR CG43277 + chr2R 19638160 intergenic CG43277 + chr2R_7_19635001 chr2R_19635001 RAL-892 953 chr2R 19680812 19680862 chr2R 19680909 19680959 21 94 7.0 4.0 5.5 3.2 147 chr2R 19680812 3` UTR CG15127 - chr2R 19680886 3` UTR CG15127 - chr2R 19680959 3` UTR CG15127 - chr2R_21_19680001 chr2R_19680001 RAL-892 954 chr2R 19715835 19715856 chr2R 19723324 19723332 blood 5 7485 9.0 5.0 7.0 0.6 7497 chr2R 19715835 intergenic not near genes chr2R 19719584 intergenic not near genes chr2R 19723332 intergenic not near genes chr2R_5_19715001 chr2R_19715001 RAL-892 955 chr2R 19773992 19774034 chr2R 19774125 19774165 10 132 4.5 6.0 5.2 1.6 173 chr2R 19773992 intergenic not near genes chr2R 19774078 intergenic not near genes chr2R 19774165 intergenic not near genes chr2R_10_19770001 chr2R_19770001 RAL-892 956 chr2R 19776586 19776623 chr2R 19779925 19779966 jockey 9 3342 4.5 4.5 4.5 1.6 3380 chr2R 19776586 intergenic not near genes chr2R 19778276 intergenic not near genes chr2R 19779966 intergenic not near genes chr2R_9_19775001 chr2R_19775001 RAL-892 957 chr2R 19794852 19794903 chr2R 19794975 19794994 6 111 1.0 2.5 1.8 2.1 142 chr2R 19794852 intergenic not near genes chr2R 19794923 intergenic not near genes chr2R 19794994 intergenic not near genes chr2R_6_19790001 chr2R_19790001 RAL-892 958 chr2R 19807653 19807703 chr2R 19807755 19807805 19 102 4.5 4.0 4.2 3.7 152 chr2R 19807653 intergenic not near genes chr2R 19807729 intergenic not near genes chr2R 19807805 intergenic not near genes chr2R_19_19805001 chr2R_19805001 RAL-892 959 chr2R 19846102 19846151 chr2R 19846199 19846248 17 97 4.5 1.5 3.0 4.2 146 chr2R 19846102 intergenic not near genes chr2R 19846175 intergenic not near genes chr2R 19846248 intergenic not near genes chr2R_17_19845001 chr2R_19845001 RAL-892 960 chr2R 19914833 19914875 chr2R 19922265 19922307 mdg1 16 7431 6.0 2.0 4.0 3.2 7474 chr2R 19914833 intergenic not near genes chr2R 19918570 intergenic not near genes chr2R 19922307 intergenic not near genes chr2R_16_19915001 chr2R_19915001 RAL-892 961 chr2R 19926002 19926034 chr2R 19926105 19926137 10 100 4.5 4.0 4.2 1.9 135 chr2R 19926002 intergenic CR44626 - chr2R 19926070 intergenic CR44626 - chr2R 19926137 intergenic CR44626 - chr2R_10_19925001 chr2R_19925001 RAL-892 962 chr2R 19943253 19943271 chr2R 19943383 19943401 7 130 3.0 2.5 2.8 1.8 148 chr2R 19943253 intergenic not near genes chr2R 19943327 intergenic not near genes chr2R 19943401 intergenic not near genes chr2R_7_19940001 chr2R_19940001 RAL-892 963 chr2R 20031887 20031939 chr2R 20032002 20032055 17 115 7.0 4.5 5.8 2.5 168 chr2R 20031887 intergenic not near genes chr2R 20031971 intergenic not near genes chr2R 20032055 intergenic not near genes chr2R_17_20030001 chr2R_20030001 RAL-892 964 chr2R 20057187 20057194 chr2R 20057305 20057311 6 118 9.5 5.0 7.2 0.7 124 chr2R 20057187 intergenic not near genes chr2R 20057249 intergenic not near genes chr2R 20057311 intergenic not near genes chr2R_6_20055001 chr2R_20055001 RAL-892 965 chr2R 20069230 20069253 chr2R 20071888 20071911 opus 6 2658 1.0 5.0 3.0 1.5 2681 chr2R 20069230 intergenic not near genes chr2R 20070570 intergenic not near genes chr2R 20071911 intergenic not near genes chr2R_6_20070001 chr2R_20070001 RAL-892 966 chr2R 20080599 20080624 chr2R 20080696 20080721 10 96 0.0 11.0 5.5 1.5 122 chr2R 20080599 intergenic not near genes chr2R 20080660 intergenic not near genes chr2R 20080721 intergenic not near genes chr2R_10_20080001 chr2R_20080001 RAL-892 967 chr2R 20101851 20101864 chr2R 20101948 20101965 5 100 9.5 5.0 7.2 0.6 114 chr2R 20101851 intergenic not near genes chr2R 20101908 intergenic not near genes chr2R 20101965 intergenic not near genes chr2R_5_20100001 chr2R_20100001 RAL-892 968 chr2R 20101865 20101887 chr2R 20101941 20101989 11 98 6.5 3.0 4.8 1.9 124 chr2R 20101865 intergenic not near genes chr2R 20101927 intergenic not near genes chr2R 20101989 intergenic not near genes chr2R_11_20100001 chr2R_20100001 RAL-892 969 chr2R 20118866 20118892 chr2R 20118971 20118985 4 100 2.0 4.5 3.2 1.0 119 chr2R 20118866 intergenic not near genes chr2R 20118926 intergenic not near genes chr2R 20118985 intergenic not near genes chr2R_4_20115001 chr2R_20115001 RAL-892 970 chr2R 20124029 20124073 chr2R 20124145 20124189 12 116 0.0 5.5 2.8 3.2 160 chr2R 20124029 intergenic not near genes chr2R 20124109 intergenic not near genes chr2R 20124189 intergenic not near genes chr2R_12_20120001 chr2R_20120001 RAL-892 971 chr2R 20125727 20125744 chr2R 20125823 20125840 12 96 4.5 10.0 7.2 1.5 113 chr2R 20125727 intergenic not near genes chr2R 20125784 intergenic not near genes chr2R 20125840 intergenic not near genes chr2R_12_20125001 chr2R_20125001 RAL-892 972 chr2R 20281330 20281374 chr2R 20286078 20286122 7 4752 30.0 23.5 26.8 0.3 4792 chr2R 20281330 intergenic CG9090 -,CG16868 - chr2R 20283726 exon CG16868 - chr2R 20286122 exon CG16868 - chr2R_7_20280001 chr2R_20280001 RAL-892 973 chr2R 20379138 20379148 chr2R 20379241 20379251 6 103 5.0 0.0 2.5 1.7 113 chr2R 20379138 intergenic not near genes chr2R 20379194 intergenic not near genes chr2R 20379251 intergenic not near genes chr2R_6_20375001 chr2R_20375001 RAL-892 974 chr2R 20422544 20422597 chr2R 20422643 20422696 10 99 3.0 3.5 3.2 2.4 152 chr2R 20422544 intergenic not near genes chr2R 20422620 intergenic not near genes chr2R 20422696 intergenic not near genes chr2R_10_20420001 chr2R_20420001 RAL-892 975 chr2R 20424435 20424451 chr2R 20424502 20424522 5 83 2.5 5.5 4.0 1.0 87 chr2R 20424435 5` UTR CG12484 + chr2R 20424478 5` UTR CG12484 + chr2R 20424522 5` UTR CG12484 + chr2R_5_20420001 chr2R_20420001 RAL-892 976 chr2R 20479873 20479882 chr2R 20479963 20479978 5 93 4.0 1.5 2.8 1.3 105 chr2R 20479873 intergenic not near genes chr2R 20479926 intergenic not near genes chr2R 20479978 intergenic not near genes chr2R_5_20475001 chr2R_20475001 RAL-892 977 chr2R 20503912 20503965 chr2R 20504012 20504065 8 100 5.0 8.0 6.5 1.1 153 chr2R 20503912 exon Obp57c + chr2R 20503988 exon Obp57c + chr2R 20504065 exon Obp57c + chr2R_8_20500001 chr2R_20500001 RAL-892 978 chr2R 20523043 20523066 chr2R 20523155 20523171 6 120 0.5 4.5 2.5 1.7 128 chr2R 20523043 intergenic not near genes chr2R 20523107 intergenic not near genes chr2R 20523171 intergenic not near genes chr2R_6_20520001 chr2R_20520001 RAL-892 979 chr2R 20555321 20555334 chr2R 20555425 20555438 9 104 0.0 2.5 1.2 4.1 117 chr2R 20555321 intergenic not near genes chr2R 20555380 intergenic not near genes chr2R 20555438 intergenic not near genes chr2R_9_20555001 chr2R_20555001 RAL-892 980 chr2R 20601719 20601747 chr2R 20601824 20601852 9 104 0.5 4.5 2.5 2.6 133 chr2R 20601719 intron bl + chr2R 20601786 intron bl + chr2R 20601852 intron bl + chr2R_9_20600001 chr2R_20600001 RAL-892 981 chr2R 20702672 20702698 chr2R 20702741 20702790 8 87 4.5 4.0 4.2 1.5 118 chr2R 20702672 intron dpr + chr2R 20702731 intron dpr + chr2R 20702790 intron dpr + chr2R_8_20700001 chr2R_20700001 RAL-892 982 chr2R 20739440 20739478 chr2R 20744228 20744245 F-element 8 4782 2.0 4.5 3.2 1.9 4805 chr2R 20739440 intron dpr + chr2R 20741842 intron dpr + chr2R 20744245 intron dpr + chr2R_8_20740001 chr2R_20740001 RAL-892 983 chr2R 20760826 20760843 chr2R 20761118 20761135 6 292 0.5 0.0 0.2 5.0 309 chr2R 20760826 intergenic not near genes chr2R 20760980 intergenic not near genes chr2R 20761135 intergenic not near genes chr2R_6_20760001 chr2R_20760001 RAL-892 984 chr2R 20783299 20783330 chr2R 20788091 20788122 F-element 8 4790 4.5 6.0 5.2 1.3 4823 chr2R 20783299 intergenic not near genes chr2R 20785710 intergenic not near genes chr2R 20788122 intergenic CG43666 - chr2R_8_20785001 chr2R_20785001 RAL-892 985 chr2R 20838062 20838080 chr2R 20838163 20838181 8 101 0.0 5.5 2.8 2.1 119 chr2R 20838062 intron CR44667 + chr2R 20838122 intron CR44667 + chr2R 20838181 intron CR44667 + chr2R_8_20835001 chr2R_20835001 RAL-892 986 chr2R 20842885 20842923 chr2R 20842988 20843026 9 103 3.5 8.5 6.0 1.3 141 chr2R 20842885 intergenic not near genes chr2R 20842956 intergenic not near genes chr2R 20843026 intergenic not near genes chr2R_9_20840001 chr2R_20840001 RAL-892 987 chr2R 20869747 20869753 chr2R 20869984 20869991 4 238 9.5 7.5 8.5 0.4 244 chr2R 20869747 intergenic IM4 - chr2R 20869869 intergenic not near genes chr2R 20869991 intergenic IM14 + chr2R_4_20865001 chr2R_20865001 RAL-892 988 chr2R 20962893 20962899 chr2R 20963011 20963017 5 118 11.5 5.0 8.2 0.5 124 chr2R 20962893 intergenic not near genes chr2R 20962955 intergenic not near genes chr2R 20963017 intergenic not near genes chr2R_5_20960001 chr2R_20960001 RAL-892 989 chr2R 20962903 20962923 chr2R 20963009 20963036 5 114 6.5 4.0 5.2 0.8 133 chr2R 20962903 intergenic not near genes chr2R 20962970 intergenic not near genes chr2R 20963036 intergenic not near genes chr2R_5_20960001 chr2R_20960001 RAL-892 990 chr2R 20962926 20962934 chr2R 20963005 20963052 6 111 5.0 3.5 4.2 1.2 126 chr2R 20962926 intergenic not near genes chr2R 20962989 intergenic not near genes chr2R 20963052 intergenic not near genes chr2R_6_20960001 chr2R_20960001 RAL-892 991 chr2R 20967012 20967059 chr2R 20967108 20967156 8 97 2.5 0.0 1.2 3.6 144 chr2R 20967012 intergenic not near genes chr2R 20967084 intergenic not near genes chr2R 20967156 intergenic not near genes chr2R_8_20965001 chr2R_20965001 RAL-892 992 chr2R 21031582 21031593 chr2R 21032021 21032029 5 444 1.5 5.5 3.5 1.1 447 chr2R 21031582 intergenic not near genes chr2R 21031806 intergenic not near genes chr2R 21032029 intergenic not near genes chr2R_5_21030001 chr2R_21030001 RAL-892 993 chr2R 21040872 21040892 chr2R 21040958 21040988 9 92 3.0 9.5 6.2 1.2 116 chr2R 21040872 intergenic not near genes chr2R 21040930 intergenic not near genes chr2R 21040988 intergenic not near genes chr2R_9_21040001 chr2R_21040001 RAL-892 994 chr2R 21060614 21060655 chr2R 21060710 21060751 14 96 3.5 3.0 3.2 3.3 137 chr2R 21060614 intergenic CG15653 -,mRpL54 + chr2R 21060682 intergenic mRpL54 +,CG15653 - chr2R 21060751 intergenic mRpL54 +,CG15653 - chr2R_14_21060001 chr2R_21060001 RAL-892 995 chr2R 21079310 21079351 chr2R 21079406 21079447 8 94 3.5 2.5 3.0 2.0 137 chr2R 21079310 intron Treh + chr2R 21079378 intron Treh + chr2R 21079447 intron Treh + chr2R_8_21075001 chr2R_21075001 RAL-892 996 chr2R 21103519 21103550 chr2R 21103619 21103622 16 98 4.0 0.5 2.2 5.0 103 chr2R 21103519 intron ktub + chr2R 21103570 intron ktub + chr2R 21103622 intron ktub + chr2R_16_21100001 chr2R_21100001 RAL-892 997 chr2R 21151098 21151145 chr2R 21153751 21153798 opus 18 2651 7.5 6.0 6.8 2.3 2700 chr2R 21151098 intron CG30389 - chr2R 21152448 intron CG30389 - chr2R 21153798 intron CG30389 - chr2R_18_21150001 chr2R_21150001 RAL-892 998 chr2R 21285414 21285436 chr2R 21285511 21285533 6 97 8.0 7.0 7.5 0.7 119 chr2R 21285414 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285474 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285533 3` UTR,3` UTR MFS16 +,CG10505 - chr2R_6_21285001 chr2R_21285001 RAL-892 999 chr2R 21290127 21290171 chr2R 21290226 21290247 9 88 2.5 5.5 4.0 1.8 120 chr2R 21290127 intron CG10505 - chr2R 21290187 intron CG10505 - chr2R 21290247 exon CG10505 - chr2R_9_21290001 chr2R_21290001 RAL-892 1000 chr2R 21363117 21363184 chr2R 21363235 21363293 7 114 0.0 0.0 0.0 7.0 176 chr2R 21363117 intron cv-2 - chr2R 21363205 intron cv-2 - chr2R 21363293 intron cv-2 - chr2R_7_21360001 chr2R_21360001 RAL-892 1001 chr2R 21417260 21417279 chr2R 21417381 21417394 7 120 6.5 0.0 3.2 1.7 134 chr2R 21417260 intron Sdc - chr2R 21417327 intron Sdc - chr2R 21417394 intron Sdc - chr2R_7_21415001 chr2R_21415001 RAL-892 1002 chr2R 21421319 21421350 chr2R 21421418 21421448 7 99 5.5 8.0 6.8 0.9 129 chr2R 21421319 intron Sdc - chr2R 21421384 intron Sdc - chr2R 21421448 intron Sdc - chr2R_7_21420001 chr2R_21420001 RAL-892 1003 chr2R 21455083 21455116 chr2R 21455466 21455499 12 383 0.5 7.0 3.8 2.5 416 chr2R 21455083 intron Sdc - chr2R 21455291 intron Sdc - chr2R 21455499 intron Sdc - chr2R_12_21455001 chr2R_21455001 RAL-892 1004 chr2R 21612338 21612380 chr2R 21612441 21612463 13 102 6.0 1.0 3.5 2.9 125 chr2R 21612338 intron CG15673 - chr2R 21612400 intron CG15673 - chr2R 21612463 intron CG15673 - chr2R_13_21610001 chr2R_21610001 RAL-892 1005 chr2R 21625796 21625823 chr2R 21625892 21625919 7 96 2.5 4.5 3.5 1.6 123 chr2R 21625796 exon mahj + chr2R 21625858 intron mahj + chr2R 21625919 intron mahj + chr2R_7_21625001 chr2R_21625001 RAL-892 1006 chr2R 21721573 21721610 chr2R 21721671 21721700 7 102 3.5 0.0 1.8 2.5 127 chr2R 21721573 intron LBR + chr2R 21721636 intron LBR + chr2R 21721700 intron LBR + chr2R_7_21720001 chr2R_21720001 RAL-892 1007 chr2R 21738262 21738311 chr2R 21747442 21747455 roo 5 9170 0.5 1.0 0.8 2.8 9193 chr2R 21738262 intergenic not near genes chr2R 21742858 intergenic not near genes chr2R 21747455 intergenic not near genes chr2R_5_21740001 chr2R_21740001 RAL-892 1008 chr2R 21753062 21753116 chr2R 21753567 21753621 roo 17 504 2.0 6.0 4.0 3.4 559 chr2R 21753062 intergenic not near genes chr2R 21753342 intergenic not near genes chr2R 21753621 intergenic not near genes chr2R_17_21750001 chr2R_21750001 RAL-892 1009 chr2R 21757203 21757212 chr2R 21757304 21757313 4 100 9.5 5.0 7.2 0.5 110 chr2R 21757203 intergenic Grx-1 + chr2R 21757258 intergenic Grx-1 + chr2R 21757313 intergenic Grx-1 + chr2R_4_21755001 chr2R_21755001 RAL-892 1010 chr2R 21757217 21757237 chr2R 21757292 21757338 5 91 5.5 2.5 4.0 1.0 121 chr2R 21757217 intergenic Grx-1 + chr2R 21757278 intergenic Grx-1 + chr2R 21757338 intergenic Grx-1 + chr2R_5_21755001 chr2R_21755001 RAL-892 1011 chr2R 21766132 21766141 chr2R 21766297 21766306 4 165 11.0 3.5 7.2 0.5 174 chr2R 21766132 exon CG30395 + chr2R 21766219 exon CG30395 + chr2R 21766306 intron CG30395 + chr2R_4_21765001 chr2R_21765001 RAL-892 1012 chr2R 21841455 21841509 chr2R 21841560 21841611 7 102 0.5 2.5 1.5 2.8 156 chr2R 21841455 intergenic not near genes chr2R 21841533 intergenic not near genes chr2R 21841611 intergenic not near genes chr2R_7_21840001 chr2R_21840001 RAL-892 1013 chr2R 21870935 21870966 chr2R 21871034 21871064 13 99 5.5 1.0 3.2 3.1 129 chr2R 21870935 intergenic not near genes chr2R 21871000 intergenic not near genes chr2R 21871064 intergenic not near genes chr2R_13_21870001 chr2R_21870001 RAL-892 1014 chr2R 21880585 21880636 chr2R 21880704 21880755 17 118 1.5 4.5 3.0 4.2 170 chr2R 21880585 intron Fili + chr2R 21880670 intron Fili + chr2R 21880755 intron Fili + chr2R_17_21880001 chr2R_21880001 RAL-892 1015 chr2R 21963177 21963204 chr2R 21963282 21963304 7 104 5.0 1.5 3.2 1.7 127 chr2R 21963177 intergenic not near genes chr2R 21963240 intergenic not near genes chr2R 21963304 intergenic not near genes chr2R_7_21960001 chr2R_21960001 RAL-892 1016 chr2R 21993352 21993404 chr2R 21993463 21993515 16 111 3.5 5.5 4.5 2.9 163 chr2R 21993352 intron CG34370 - chr2R 21993434 intron CG34370 - chr2R 21993515 intron CG34370 - chr2R_16_21990001 chr2R_21990001 RAL-892 1017 chr2R 22004277 22004317 chr2R 22004390 22004396 7 104 4.5 1.0 2.8 1.8 119 chr2R 22004277 intron CG34370 - chr2R 22004336 intron CG34370 - chr2R 22004396 intron CG34370 - chr2R_7_22000001 chr2R_22000001 RAL-892 1018 chr2R 22014215 22014227 chr2R 22014274 22014296 4 80 1.5 2.0 1.8 1.4 81 chr2R 22014215 intron CG34370 - chr2R 22014256 intron CG34370 - chr2R 22014296 intron CG34370 - chr2R_4_22010001 chr2R_22010001 RAL-892 1019 chr2R 22033822 22033845 chr2R 22033928 22033946 5 104 3.0 7.0 5.0 0.8 124 chr2R 22033822 intron CG34370 - chr2R 22033884 intron CG34370 - chr2R 22033946 intron CG34370 - chr2R_5_22030001 chr2R_22030001 RAL-892 1020 chr2R 22072684 22072711 chr2R 22072789 22072816 11 105 5.5 2.5 4.0 2.2 132 chr2R 22072684 intron CG11474 - chr2R 22072750 intron CG11474 - chr2R 22072816 exon CG11474 - chr2R_11_22070001 chr2R_22070001 RAL-892 1021 chr2R 22185669 22185693 chr2R 22185788 22185809 6 118 2.5 1.0 1.8 2.1 140 chr2R 22185669 3` UTR MED16 + chr2R 22185739 3` UTR MED16 + chr2R 22185809 3` UTR MED16 + chr2R_6_22185001 chr2R_22185001 RAL-892 1022 chr2R 22272060 22272103 chr2R 22272182 22272225 17 120 4.0 6.5 5.2 2.7 165 chr2R 22272060 intron dve + chr2R 22272142 intron dve + chr2R 22272225 intron dve + chr2R_17_22270001 chr2R_22270001 RAL-892 1023 chr2R 22290061 22290086 chr2R 22290165 22290190 7 104 6.0 1.0 3.5 1.6 129 chr2R 22290061 intergenic not near genes chr2R 22290126 intergenic not near genes chr2R 22290190 intergenic not near genes chr2R_7_22290001 chr2R_22290001 RAL-892 1024 chr2R 22349673 22349722 chr2R 22351477 22351521 jockey 15 1800 2.0 4.0 3.0 3.8 1848 chr2R 22349673 intron Liprin-gamma - chr2R 22350597 intron Liprin-gamma - chr2R 22351521 intron Liprin-gamma - chr2R_15_22350001 chr2R_22350001 RAL-892 1025 chr2R 22360364 22360378 chr2R 22360817 22360831 jockey 4 453 8.5 1.5 5.0 0.7 467 chr2R 22360364 intron Liprin-gamma - chr2R 22360598 intron Liprin-gamma - chr2R 22360831 intron Liprin-gamma - chr2R_4_22360001 chr2R_22360001 RAL-892 1026 chr2R 22370755 22370783 chr2R 22370852 22370880 8 97 3.0 3.0 3.0 2.0 125 chr2R 22370755 intron Liprin-gamma - chr2R 22370818 intron Liprin-gamma - chr2R 22370880 intron Liprin-gamma - chr2R_8_22370001 chr2R_22370001 RAL-892 1027 chr2R 22380344 22380384 chr2R 22380454 22380495 12 111 4.5 0.0 2.2 3.8 151 chr2R 22380344 intron wrapper + chr2R 22380420 intron wrapper + chr2R 22380495 intron wrapper + chr2R_12_22380001 chr2R_22380001 RAL-892 1028 chr2R 22447149 22447201 chr2R 22447300 22447352 11 146 1.0 3.5 2.2 3.4 203 chr2R 22447149 intergenic not near genes chr2R 22447250 intergenic not near genes chr2R 22447352 intergenic not near genes chr2R_11_22445001 chr2R_22445001 RAL-892 1029 chr2R 22465299 22465323 chr2R 22465511 22465536 BS 9 213 2.5 3.0 2.8 2.4 237 chr2R 22465299 intron CG10384 + chr2R 22465418 intron CG10384 + chr2R 22465536 intron CG10384 + chr2R_9_22465001 chr2R_22465001 RAL-892 1030 chr2R 22525743 22525766 chr2R 22529316 22529341 jockey 5 3573 7.5 5.5 6.5 0.7 3598 chr2R 22525743 intron px - chr2R 22527542 intron px - chr2R 22529341 intron px - chr2R_5_22525001 chr2R_22525001 RAL-892 1031 chr2R 22574141 22574189 chr2R 22574244 22574288 8 98 0.5 4.0 2.2 2.5 147 chr2R 22574141 intron dnr1 - chr2R 22574214 intron dnr1 - chr2R 22574288 intron dnr1 - chr2R_8_22570001 chr2R_22570001 RAL-892 1032 chr2R 22580419 22580435 chr2R 22586583 22586599 diver 4 6164 7.0 6.0 6.5 0.5 6180 chr2R 22580419 intron dnr1 - chr2R 22583509 intron dnr1 - chr2R 22586599 intron dnr1 - chr2R_4_22580001 chr2R_22580001 RAL-892 1033 chr2R 22623433 22623478 chr2R 22623593 22623638 11 158 4.5 1.5 3.0 2.8 205 chr2R 22623433 intron CG33143 + chr2R 22623536 intron CG33143 + chr2R 22623638 intron CG33143 + chr2R_11_22620001 chr2R_22620001 RAL-892 1034 chr2R 22646447 22646471 chr2R 22646559 22646583 10 112 6.0 0.0 3.0 2.5 136 chr2R 22646447 intergenic CG2852 -,CG30195 - chr2R 22646515 intergenic CG30195 -,CG2852 - chr2R 22646583 intergenic CG30195 -,CG2852 - chr2R_10_22645001 chr2R_22645001 RAL-892 1035 chr2R 22679771 22679782 chr2R 22679825 22679861 5 69 2.0 1.0 1.5 2.0 90 chr2R 22679771 intergenic not near genes chr2R 22679816 intergenic not near genes chr2R 22679861 intergenic not near genes chr2R_5_22675001 chr2R_22675001 RAL-892 1036 chr2R 22690436 22690453 chr2R 22690587 22690604 5 151 0.0 2.0 1.0 2.5 168 chr2R 22690436 intergenic CR44764 +,CR44763 + chr2R 22690520 5` UTR CR44764 + chr2R 22690604 5` UTR CR44764 + chr2R_5_22690001 chr2R_22690001 RAL-892 1037 chr2R 22774948 22774990 chr2R 22775380 22775429 jockey 24 436 5.0 3.0 4.0 4.8 481 chr2R 22774948 intron CG42260 - chr2R 22775188 intron CG42260 - chr2R 22775429 intron CG42260 - chr2R_24_22775001 chr2R_22775001 RAL-892 1038 chr2R 22842999 22843039 chr2R 22844984 22845024 flea 14 1982 8.5 5.0 6.8 1.8 2025 chr2R 22842999 intergenic CG9826 + chr2R 22844012 intergenic not near genes chr2R 22845024 intergenic not near genes chr2R_14_22840001 chr2R_22840001 RAL-892 1039 chr2R 22941797 22941846 chr2R 22941897 22941945 11 96 2.0 3.5 2.8 2.9 148 chr2R 22941797 intergenic CG42694 + chr2R 22941871 intergenic CG42694 + chr2R 22941945 5` UTR CG42694 + chr2R_11_22940001 chr2R_22940001 RAL-892 1040 chr2R 22957032 22957057 chr2R 22957131 22957156 6 99 3.5 4.0 3.8 1.2 124 chr2R 22957032 intergenic CR44780 - chr2R 22957094 intergenic CR44780 - chr2R 22957156 intergenic CR44780 - chr2R_6_22955001 chr2R_22955001 RAL-892 1041 chr2R 22957728 22957764 chr2R 22957830 22957866 15 102 6.5 0.0 3.2 3.6 138 chr2R 22957728 intergenic CR44780 - chr2R 22957797 intergenic CR44780 - chr2R 22957866 intergenic CR44780 - chr2R_15_22955001 chr2R_22955001 RAL-892 1042 chr2R 22971497 22971522 chr2R 22971596 22971621 4 99 0.5 7.5 4.0 0.8 124 chr2R 22971497 intergenic not near genes chr2R 22971559 intergenic not near genes chr2R 22971621 intergenic not near genes chr2R_4_22970001 chr2R_22970001 RAL-892 1043 chr2R 23000117 23000159 chr2R 23000217 23000226 14 93 4.5 5.0 4.8 2.4 109 chr2R 23000117 intron twi + chr2R 23000172 intron twi + chr2R 23000226 intron twi + chr2R_14_23000001 chr2R_23000001 RAL-892 1044 chr2R 23029594 23029616 chr2R 23029691 23029713 8 96 10.5 6.0 8.2 0.9 119 chr2R 23029594 intron,intron twi +,CG42741 - chr2R 23029654 intron,intron twi +,CG42741 - chr2R 23029713 intron,intron twi +,CG42741 - chr2R_8_23025001 chr2R_23025001 RAL-892 1045 chr2R 23116087 23116135 chr2R 23116225 23116268 15 137 3.0 4.0 3.5 3.3 181 chr2R 23116087 intergenic not near genes chr2R 23116178 intergenic not near genes chr2R 23116268 intergenic not near genes chr2R_15_23115001 chr2R_23115001 RAL-892 1046 chr2R 23186561 23186598 chr2R 23186659 23186696 11 98 3.5 8.0 5.8 1.6 135 chr2R 23186561 intron CG34371 - chr2R 23186628 intron CG34371 - chr2R 23186696 intron CG34371 - chr2R_11_23185001 chr2R_23185001 RAL-892 1047 chr2R 23188535 23188581 chr2R 23188633 23188679 10 98 4.5 5.5 5.0 1.7 144 chr2R 23188535 intron CG34371 - chr2R 23188607 intron CG34371 - chr2R 23188679 intron CG34371 - chr2R_10_23185001 chr2R_23185001 RAL-892 1048 chr2R 23190002 23190020 chr2R 23190102 23190120 9 100 7.5 0.0 3.8 1.9 118 chr2R 23190002 intron CG34371 - chr2R 23190061 intron CG34371 - chr2R 23190120 intron CG34371 - chr2R_9_23190001 chr2R_23190001 RAL-892 1049 chr2R 23194292 23194348 chr2R 23194435 23194474 8 138 0.0 2.5 1.2 3.6 182 chr2R 23194292 intron CG34371 - chr2R 23194383 intron CG34371 - chr2R 23194474 intron CG34371 - chr2R_8_23190001 chr2R_23190001 RAL-892 1050 chr2R 23236798 23236851 chr2R 23236916 23236964 5 115 0.5 0.0 0.2 4.2 166 chr2R 23236798 intergenic not near genes chr2R 23236881 intergenic not near genes chr2R 23236964 intergenic not near genes chr2R_5_23235001 chr2R_23235001 RAL-892 1051 chr2R 23351902 23351951 chr2R 23352008 23352037 13 102 1.5 2.5 2.0 4.3 135 chr2R 23351902 exon CG34210 + chr2R 23351970 3` UTR CG34210 + chr2R 23352037 3` UTR CG34210 + chr2R_13_23350001 chr2R_23350001 RAL-892 1052 chr2R 23402590 23402641 chr2R 23407686 23407734 flea 17 5095 2.5 6.0 4.2 3.3 5144 chr2R 23402590 intergenic CG3520 - chr2R 23405162 intergenic not near genes chr2R 23407734 intergenic not near genes chr2R_17_23405001 chr2R_23405001 RAL-892 1053 chr2R 23428786 23428818 chr2R 23428887 23428924 12 102 1.0 4.5 2.8 3.2 138 chr2R 23428786 intron CG9815 - chr2R 23428855 intron CG9815 - chr2R 23428924 intron CG9815 - chr2R_12_23425001 chr2R_23425001 RAL-892 1054 chr2R 23429188 23429236 chr2R 23429433 23429451 12 234 4.0 0.0 2.0 4.0 263 chr2R 23429188 intron CG9815 - chr2R 23429320 intron CG9815 - chr2R 23429451 intron CG9815 - chr2R_12_23425001 chr2R_23425001 RAL-892 1055 chr2R 23508898 23508942 chr2R 23509035 23509079 16 137 5.0 3.5 4.2 3.1 181 chr2R 23508898 intergenic not near genes chr2R 23508988 intergenic not near genes chr2R 23509079 intergenic not near genes chr2R_16_23505001 chr2R_23505001 RAL-892 1056 chr2R 23518178 23518207 chr2R 23518276 23518305 7 98 6.0 7.0 6.5 0.9 127 chr2R 23518178 intergenic not near genes chr2R 23518242 intergenic not near genes chr2R 23518305 intergenic not near genes chr2R_7_23515001 chr2R_23515001 RAL-892 1057 chr2R 23563875 23563921 chr2R 23563972 23564021 16 98 3.0 2.5 2.8 4.2 146 chr2R 23563875 3` UTR Pi3K59F + chr2R 23563948 3` UTR Pi3K59F + chr2R 23564021 3` UTR,5` UTR Pi3K59F +,CG30184 + chr2R_16_23560001 chr2R_23560001 RAL-892 1058 chr2R 23636699 23636729 chr2R 23636796 23636827 14 94 5.0 0.5 2.8 3.7 128 chr2R 23636699 intron retn + chr2R 23636763 intron retn + chr2R 23636827 intron retn + chr2R_14_23635001 chr2R_23635001 RAL-892 1059 chr2R 23674162 23674191 chr2R 23674262 23674291 14 99 5.5 4.5 5.0 2.3 129 chr2R 23674162 intron Pde8 + chr2R 23674226 intron Pde8 + chr2R 23674291 exon Pde8 + chr2R_14_23670001 chr2R_23670001 RAL-892 1060 chr2R 23771256 23771304 chr2R 23771357 23771402 4 99 1.5 0.0 0.8 2.2 146 chr2R 23771256 intron CG9850 - chr2R 23771329 intron CG9850 - chr2R 23771402 intron CG9850 - chr2R_4_23770001 chr2R_23770001 RAL-892 1061 chr2R 23784450 23784505 chr2R 23784548 23784601 20 94 4.0 5.0 4.5 3.6 151 chr2R 23784450 intron CG9850 - chr2R 23784526 intron CG9850 - chr2R 23784601 intron CG9850 - chr2R_20_23780001 chr2R_23780001 RAL-892 1062 chr2R 23802267 23802309 chr2R 23802390 23802416 5 120 1.5 9.0 5.2 0.8 149 chr2R 23802267 3` UTR CG30177 + chr2R 23802342 3` UTR CG30177 + chr2R 23802416 3` UTR CG30177 + chr2R_5_23800001 chr2R_23800001 RAL-892 1063 chr2R 23865809 23865854 chr2R 23865911 23865956 5 102 4.0 3.5 3.8 1.0 147 chr2R 23865809 intron CG5569 + chr2R 23865882 intron CG5569 + chr2R 23865956 intron CG5569 + chr2R_5_23865001 chr2R_23865001 RAL-892 1064 chr2R 23914312 23914327 chr2R 23921942 23921942 412 6 7636 3.5 3.0 3.2 1.4 7630 chr2R 23914312 exon kcc + chr2R 23918127 intron kcc + chr2R 23921942 intron kcc + chr2R_6_23915001 chr2R_23915001 RAL-892 1065 chr2R 23986508 23986547 chr2R 23986592 23986647 13 98 2.0 2.0 2.0 4.3 139 chr2R 23986508 intron Phm - chr2R 23986578 intron Phm - chr2R 23986647 intron,5` UTR Phm -,CG30178 + chr2R_13_23985001 chr2R_23985001 RAL-892 1066 chr2R 24008391 24008444 chr2R 24008497 24008550 19 106 8.5 4.5 6.5 2.5 159 chr2R 24008391 intron Unc-89 - chr2R 24008470 intron Unc-89 - chr2R 24008550 intron Unc-89 - chr2R_19_24005001 chr2R_24005001 RAL-892 1067 chr2R 24031362 24031412 chr2R 24031466 24031516 16 101 5.5 7.5 6.5 2.1 154 chr2R 24031362 5` UTR CG30172 - chr2R 24031439 intergenic CG30172 -,Chi - chr2R 24031516 intergenic Chi -,CG30172 - chr2R_16_24030001 chr2R_24030001 RAL-892 1068 chr2R 24073500 24073519 chr2R 24073608 24073627 5 107 4.5 3.0 3.8 1.0 127 chr2R 24073500 3` UTR CG3209 + chr2R 24073564 intergenic CG3209 + chr2R 24073627 intergenic CG3209 + chr2R_5_24070001 chr2R_24070001 RAL-892 1069 chr2R 24073521 24073541 chr2R 24073605 24073642 6 94 3.0 2.5 2.8 1.6 121 chr2R 24073521 3` UTR CG3209 + chr2R 24073582 intergenic CG3209 + chr2R 24073642 intergenic CG3209 + chr2R_6_24070001 chr2R_24070001 RAL-892 1070 chr2R 24147058 24147095 chr2R 24154656 24154686 412 4 7591 2.0 5.0 3.5 0.9 7628 chr2R 24147058 intron Dat + chr2R 24150872 intron Dat + chr2R 24154686 intron Dat + chr2R_4_24150001 chr2R_24150001 RAL-892 1071 chr2R 24177215 24177265 chr2R 24184720 24184744 412 29 7503 7.5 4.0 5.8 4.3 7529 chr2R 24177215 3` UTR Nop60B + chr2R 24180980 intron Nop60B + chr2R 24184744 3` UTR Nop60B + chr2R_29_24180001 chr2R_24180001 RAL-892 1072 chr2R 24228384 24228428 chr2R 24228476 24228492 5 72 1.0 3.5 2.2 1.6 108 chr2R 24228384 intron CG30419 - chr2R 24228438 intron CG30419 - chr2R 24228492 intron CG30419 - chr2R_5_24225001 chr2R_24225001 RAL-892 1073 chr2R 24353409 24353457 chr2R 24361791 24361824 roo 11 8378 6.5 4.0 5.2 1.8 8415 chr2R 24353409 intron,intron bs +,CR44811 - chr2R 24357616 intron,intron bs +,CR44811 - chr2R 24361824 intron,intron bs +,CR44811 - chr2R_11_24355001 chr2R_24355001 RAL-892 1074 chr2R 24430921 24430928 chr2R 24431022 24431035 6 106 0.0 7.5 3.8 1.2 114 chr2R 24430921 intergenic CG15873 -,Pgam5-2 - chr2R 24430978 intergenic CG15873 -,Pgam5-2 - chr2R 24431035 intergenic Pgam5-2 -,CG15873 - chr2R_6_24430001 chr2R_24430001 RAL-892 1075 chr2R 24430933 24430949 chr2R 24431016 24431022 7 98 0.0 6.5 3.2 1.7 89 chr2R 24430933 intergenic CG15873 -,Pgam5-2 - chr2R 24430978 intergenic CG15873 -,Pgam5-2 - chr2R 24431022 intergenic Pgam5-2 -,CG15873 - chr2R_7_24430001 chr2R_24430001 RAL-892 1076 chr2R 24647577 24647612 chr2R 24655154 24655189 412 7 7577 6.0 8.0 7.0 0.9 7612 chr2R 24647577 intergenic not near genes chr2R 24651383 intergenic not near genes chr2R 24655189 intergenic not near genes chr2R_7_24650001 chr2R_24650001 RAL-892 1077 chr2R 24721231 24721280 chr2R 24721402 24721451 15 168 4.5 5.5 5.0 2.5 220 chr2R 24721231 intron Mid1 - chr2R 24721341 intron Mid1 - chr2R 24721451 intron Mid1 - chr2R_15_24720001 chr2R_24720001 RAL-892 1078 chr2R 24727872 24727918 chr2R 24735390 24735433 mdg1 7 7520 3.5 3.5 3.5 1.6 7561 chr2R 24727872 intron Mid1 - chr2R 24731652 intron Mid1 - chr2R 24735433 intron Mid1 - chr2R_7_24730001 chr2R_24730001 RAL-892 1079 chr2R 24884033 24884078 chr2R 24884135 24884180 20 101 4.5 3.0 3.8 4.2 147 chr2R 24884033 intron NKAIN + chr2R 24884106 intron NKAIN + chr2R 24884180 intron NKAIN + chr2R_20_24880001 chr2R_24880001 RAL-892 1080 chr2R 25014546 25014551 chr2R 25014627 25014647 4 91 6.0 6.0 6.0 0.6 101 chr2R 25014546 intron uzip + chr2R 25014596 intron uzip + chr2R 25014647 intron uzip + chr2R_4_25010001 chr2R_25010001 RAL-892 1081 chr2R 25014552 25014575 chr2R 25014623 25014670 9 88 4.5 6.0 5.2 1.5 118 chr2R 25014552 intron uzip + chr2R 25014611 intron uzip + chr2R 25014670 intron uzip + chr2R_9_25010001 chr2R_25010001 RAL-892 1082 chr2R 25018327 25018372 chr2R 25018443 25018493 13 118 3.0 1.5 2.2 4.1 166 chr2R 25018327 intron uzip + chr2R 25018410 intron uzip + chr2R 25018493 intron uzip + chr2R_13_25015001 chr2R_25015001 RAL-892 1083 chr2R 25022619 25022673 chr2R 25022723 25022777 12 103 5.0 2.0 3.5 2.7 158 chr2R 25022619 intron uzip + chr2R 25022698 intron uzip + chr2R 25022777 intron uzip + chr2R_12_25020001 chr2R_25020001 RAL-892 1084 chr2R 25081617 25081638 chr2R 25082704 25082754 8 1110 0.5 8.0 4.2 1.5 1137 chr2R 25081617 intron gol - chr2R 25082186 intron gol - chr2R 25082754 intron gol - chr2R_8_25080001 chr2R_25080001 RAL-892 1085 chr2R 25101255 25101307 chr2R 25101376 25101429 12 120 3.5 1.5 2.5 3.4 174 chr2R 25101255 intron lov - chr2R 25101342 intron lov - chr2R 25101429 intron lov - chr2R_12_25100001 chr2R_25100001 RAL-892 1086 chr2R 25104757 25104807 chr2R 25104902 25104923 16 143 2.5 6.0 4.2 3.1 166 chr2R 25104757 intron lov - chr2R 25104840 intron lov - chr2R 25104923 intron lov - chr2R_16_25100001 chr2R_25100001 RAL-892 1087 chr2R 25130989 25131040 chr2R 25131086 25131137 17 96 5.5 4.5 5.0 2.8 148 chr2R 25130989 intron lov - chr2R 25131063 intron lov - chr2R 25131137 intron lov - chr2R_17_25130001 chr2R_25130001 RAL-892 1088 chr2R 25141632 25141679 chr2R 25159342 25159389 roo 15 17709 5.0 5.5 5.2 2.4 17757 chr2R 25141632 intergenic not near genes chr2R 25150510 intergenic not near genes chr2R 25159389 intergenic not near genes chr2R_15_25150001 chr2R_25150001 RAL-892 1089 chr2R 25167665 25167700 chr2R 25167767 25167802 10 101 3.0 1.5 2.2 3.1 137 chr2R 25167665 5` UTR CG34038 + chr2R 25167734 5` UTR CG34038 + chr2R 25167802 5` UTR CG34038 + chr2R_10_25165001 chr2R_25165001 RAL-892 1090 chr2R 25201218 25201252 chr2R 25201360 25201393 8 143 4.5 2.0 3.2 1.9 175 chr2R 25201218 intron CG9380 - chr2R 25201306 intron CG9380 - chr2R 25201393 intron CG9380 - chr2R_8_25200001 chr2R_25200001 RAL-892 1091 chr3L 52892 52933 chr3L 52996 53018 13 102 6.0 1.5 3.8 2.7 126 chr3L 52892 intergenic not near genes chr3L 52955 intergenic not near genes chr3L 53018 intergenic not near genes chr3L_13_50001 chr3L_50001 RAL-892 1092 chr3L 68964 69012 chr3L 69070 69104 13 106 2.5 1.0 1.8 4.6 140 chr3L 68964 3` UTR Lsp1gamma + chr3L 69034 intergenic Lsp1gamma +,CR44510 + chr3L 69104 intergenic CR44510 +,Lsp1gamma + chr3L_13_65001 chr3L_65001 RAL-892 1093 chr3L 84059 84098 chr3L 84305 84344 15 246 5.0 6.5 5.8 2.2 285 chr3L 84059 intergenic not near genes chr3L 84202 intergenic not near genes chr3L 84344 intergenic not near genes chr3L_15_80001 chr3L_80001 RAL-892 1094 chr3L 86803 86823 chr3L 88743 88749 4 1929 32.5 17.0 24.8 0.2 1946 chr3L 86803 intergenic not near genes chr3L 87776 intergenic not near genes chr3L 88749 intergenic not near genes chr3L_4_85001 chr3L_85001 RAL-892 1095 chr3L 110192 110233 chr3L 119379 119409 roo 11 9186 6.0 3.5 4.8 1.9 9217 chr3L 110192 intergenic not near genes chr3L 114800 intergenic not near genes chr3L 119409 intergenic not near genes chr3L_11_110001 chr3L_110001 RAL-892 1096 chr3L 402678 402708 chr3L 409751 409770 297 4 7067 5.0 9.0 7.0 0.5 7092 chr3L 402678 intergenic not near genes chr3L 406224 intergenic not near genes chr3L 409770 intergenic not near genes chr3L_4_405001 chr3L_405001 RAL-892 1097 chr3L 428170 428190 chr3L 428310 428331 6 138 5.0 0.0 2.5 1.7 161 chr3L 428170 intergenic not near genes chr3L 428250 intergenic not near genes chr3L 428331 intergenic not near genes chr3L_6_425001 chr3L_425001 RAL-892 1098 chr3L 514977 515014 chr3L 515106 515144 9 129 1.5 0.0 0.8 5.0 167 chr3L 514977 intron klar - chr3L 515060 intron klar - chr3L 515144 intron klar - chr3L_9_515001 chr3L_515001 RAL-892 1099 chr3L 524754 524776 chr3L 524856 524878 11 102 0.0 7.5 3.8 2.3 124 chr3L 524754 intron klar - chr3L 524816 intron klar - chr3L 524878 intron klar - chr3L_11_520001 chr3L_520001 RAL-892 1100 chr3L 559519 559535 chr3L 559911 559935 5 398 4.0 1.5 2.8 1.3 416 chr3L 559519 intron hipk + chr3L 559727 intron hipk + chr3L 559935 intron hipk + chr3L_5_555001 chr3L_555001 RAL-892 1101 chr3L 592945 592969 chr3L 593041 593065 10 96 2.5 8.0 5.2 1.6 120 chr3L 592945 intergenic MED14 + chr3L 593005 intergenic MED14 + chr3L 593065 intergenic MED14 + chr3L_10_590001 chr3L_590001 RAL-892 1102 chr3L 695151 695166 chr3L 695403 695403 7 249 3.0 0.0 1.5 2.8 252 chr3L 695151 intron CG13894 - chr3L 695277 intron CG13894 - chr3L 695403 intron CG13894 - chr3L_7_695001 chr3L_695001 RAL-892 1103 chr3L 705882 705929 chr3L 705998 706045 9 115 3.0 4.0 3.5 2.0 163 chr3L 705882 intergenic CG13895 -,CR44514 + chr3L 705964 3` UTR CG13895 - chr3L 706045 3` UTR CG13895 - chr3L_9_705001 chr3L_705001 RAL-892 1104 chr3L 759815 759833 chr3L 760005 760012 5 183 4.0 5.0 4.5 0.9 197 chr3L 759815 intergenic not near genes chr3L 759914 intergenic not near genes chr3L 760012 intergenic not near genes chr3L_5_755001 chr3L_755001 RAL-892 1105 chr3L 789900 789944 chr3L 790405 790449 roo 12 504 2.5 2.5 2.5 3.4 549 chr3L 789900 intergenic not near genes chr3L 790174 intergenic not near genes chr3L 790449 intergenic not near genes chr3L_12_790001 chr3L_790001 RAL-892 1106 chr3L 822073 822095 chr3L 822173 822195 6 100 0.0 7.5 3.8 1.2 122 chr3L 822073 intergenic not near genes chr3L 822134 intergenic not near genes chr3L 822195 intergenic not near genes chr3L_6_820001 chr3L_820001 RAL-892 1107 chr3L 858006 858026 chr3L 866480 866503 Tirant 5 8481 6.0 4.0 5.0 0.8 8497 chr3L 858006 intergenic not near genes chr3L 862254 intergenic not near genes chr3L 866503 5` UTR CG12502 + chr3L_5_860001 chr3L_860001 RAL-892 1108 chr3L 918432 918462 chr3L 918537 918569 5 105 1.5 7.5 4.5 0.9 137 chr3L 918432 intron Glut1 + chr3L 918500 intron Glut1 + chr3L 918569 intron Glut1 + chr3L_5_915001 chr3L_915001 RAL-892 1109 chr3L 922151 922184 chr3L 922248 922286 8 99 2.0 3.0 2.5 2.3 135 chr3L 922151 intron Glut1 + chr3L 922218 intron Glut1 + chr3L 922286 intron Glut1 + chr3L_8_920001 chr3L_920001 RAL-892 1110 chr3L 925164 925169 chr3L 932609 932613 mdg1 4 7445 6.5 7.0 6.8 0.5 7449 chr3L 925164 intron Glut1 + chr3L 928888 intron Glut1 + chr3L 932613 intron Glut1 + chr3L_4_925001 chr3L_925001 RAL-892 1111 chr3L 925172 925208 chr3L 932602 932654 mdg1 18 7442 2.0 6.5 4.2 3.5 7482 chr3L 925172 intron Glut1 + chr3L 928913 intron Glut1 + chr3L 932654 intron Glut1 + chr3L_18_925001 chr3L_925001 RAL-892 1112 chr3L 933912 933942 chr3L 934025 934065 9 122 6.0 5.0 5.5 1.4 153 chr3L 933912 intron Glut1 + chr3L 933988 intron Glut1 + chr3L 934065 intron Glut1 + chr3L_9_930001 chr3L_930001 RAL-892 1113 chr3L 939756 939790 chr3L 940897 940928 jockey 9 1141 2.0 6.0 4.0 1.8 1172 chr3L 939756 intron Glut1 + chr3L 940342 intron Glut1 + chr3L 940928 intron Glut1 + chr3L_9_940001 chr3L_940001 RAL-892 1114 chr3L 961004 961045 chr3L 961117 961158 12 113 3.0 5.0 4.0 2.4 154 chr3L 961004 intron Glut1 + chr3L 961081 intron Glut1 + chr3L 961158 intron Glut1 + chr3L_12_960001 chr3L_960001 RAL-892 1115 chr3L 971910 971942 chr3L 972070 972099 8 156 2.0 4.0 3.0 2.0 189 chr3L 971910 intron Glut1 + chr3L 972004 intron Glut1 + chr3L 972099 intron Glut1 + chr3L_8_970001 chr3L_970001 RAL-892 1116 chr3L 1008486 1008533 chr3L 1008582 1008629 19 94 3.0 3.5 3.2 4.5 143 chr3L 1008486 intron trio - chr3L 1008558 intron trio - chr3L 1008629 intron trio - chr3L_19_1005001 chr3L_1005001 RAL-892 1117 chr3L 1009072 1009080 chr3L 1009168 1009193 4 109 0.0 5.0 2.5 1.1 121 chr3L 1009072 intron trio - chr3L 1009132 intron trio - chr3L 1009193 intron trio - chr3L_4_1005001 chr3L_1005001 RAL-892 1118 chr3L 1022065 1022089 chr3L 1022135 1022172 7 89 0.0 2.0 1.0 3.5 107 chr3L 1022065 intron trio - chr3L 1022118 intron trio - chr3L 1022172 intron trio - chr3L_7_1020001 chr3L_1020001 RAL-892 1119 chr3L 1033317 1033347 chr3L 1033444 1033463 4 120 0.0 0.0 0.0 4.0 146 chr3L 1033317 intron trio - chr3L 1033390 intron trio - chr3L 1033463 intron trio - chr3L_4_1030001 chr3L_1030001 RAL-892 1120 chr3L 1047382 1047385 chr3L 1055164 1055199 412 5 7796 1.5 2.5 2.0 1.7 7817 chr3L 1047382 intron bab1 - chr3L 1051290 intron bab1 - chr3L 1055199 intron bab1 - chr3L_5_1050001 chr3L_1050001 RAL-892 1121 chr3L 1145222 1145263 chr3L 1145320 1145340 9 96 3.0 0.0 1.5 3.6 118 chr3L 1145222 intron bab2 - chr3L 1145281 intron bab2 - chr3L 1145340 intron bab2 - chr3L_9_1145001 chr3L_1145001 RAL-892 1122 chr3L 1154119 1154163 chr3L 1163289 1163333 roo 13 9170 3.5 2.5 3.0 3.2 9214 chr3L 1154119 intron bab2 - chr3L 1158726 intron bab2 - chr3L 1163333 intron bab2 - chr3L_13_1155001 chr3L_1155001 RAL-892 1123 chr3L 1167658 1167675 chr3L 1167760 1167768 5 98 8.0 2.5 5.2 0.8 110 chr3L 1167658 intron bab2 - chr3L 1167713 intron bab2 - chr3L 1167768 intron bab2 - chr3L_5_1165001 chr3L_1165001 RAL-892 1124 chr3L 1167678 1167700 chr3L 1167759 1167802 8 96 4.0 2.5 3.2 1.9 124 chr3L 1167678 intron bab2 - chr3L 1167740 intron bab2 - chr3L 1167802 intron bab2 - chr3L_8_1165001 chr3L_1165001 RAL-892 1125 chr3L 1169035 1169071 chr3L 1169136 1169171 5 99 4.5 2.5 3.5 1.1 136 chr3L 1169035 intron bab2 - chr3L 1169103 intron bab2 - chr3L 1169171 intron bab2 - chr3L_5_1165001 chr3L_1165001 RAL-892 1126 chr3L 1195380 1195401 chr3L 1195603 1195625 6 224 0.0 0.0 0.0 6.0 245 chr3L 1195380 intergenic LysX - chr3L 1195502 intergenic LysX - chr3L 1195625 intergenic LysX - chr3L_6_1195001 chr3L_1195001 RAL-892 1127 chr3L 1219578 1219620 chr3L 1227331 1227373 412 10 7748 1.0 3.5 2.2 3.1 7795 chr3L 1219578 intron mwh + chr3L 1223476 intron mwh + chr3L 1227373 intron mwh + chr3L_10_1220001 chr3L_1220001 RAL-892 1128 chr3L 1310990 1311032 chr3L 1315843 1315872 4 4850 15.5 23.5 19.5 0.2 4882 chr3L 1310990 exon CG2469 + chr3L 1313431 intergenic CG9186 -,CG9153 + chr3L 1315872 exon CG9153 + chr3L_4_1310001 chr3L_1310001 RAL-892 1129 chr3L 1324603 1324656 chr3L 1324701 1324752 11 93 1.5 0.0 0.8 6.1 149 chr3L 1324603 intron Myo61F + chr3L 1324678 intron Myo61F + chr3L 1324752 intron Myo61F + chr3L_11_1320001 chr3L_1320001 RAL-892 1130 chr3L 1396737 1396757 chr3L 1396837 1396857 5 100 4.5 9.0 6.8 0.6 120 chr3L 1396737 intron Ptp61F - chr3L 1396797 intron Ptp61F - chr3L 1396857 intron Ptp61F - chr3L_5_1395001 chr3L_1395001 RAL-892 1131 chr3L 1415778 1415807 chr3L 1415860 1415906 6 86 1.5 2.0 1.8 2.1 128 chr3L 1415778 intron Ptp61F - chr3L 1415842 intron Ptp61F - chr3L 1415906 intron Ptp61F - chr3L_6_1415001 chr3L_1415001 RAL-892 1132 chr3L 1463415 1463448 chr3L 1463503 1463532 5 82 3.5 6.0 4.8 0.9 117 chr3L 1463415 intron Ptp61F - chr3L 1463474 intron Ptp61F - chr3L 1463532 intron Ptp61F - chr3L_5_1460001 chr3L_1460001 RAL-892 1133 chr3L 1505981 1506031 chr3L 1513598 1513648 17.6 20 7616 4.5 5.0 4.8 3.4 7667 chr3L 1505981 intron,intron Psa +,cue - chr3L 1509814 intron,intron Psa +,cue - chr3L 1513648 intron,intron Psa +,cue - chr3L_20_1505001 chr3L_1505001 RAL-892 1134 chr3L 1571449 1571479 chr3L 1571554 1571584 6 105 2.0 4.0 3.0 1.5 135 chr3L 1571449 intron CG12004 + chr3L 1571516 intron CG12004 + chr3L 1571584 intron CG12004 + chr3L_6_1570001 chr3L_1570001 RAL-892 1135 chr3L 1585912 1585936 chr3L 1586015 1586039 13 103 0.0 0.0 0.0 13.0 127 chr3L 1585912 intron CG13917 + chr3L 1585976 intron CG13917 + chr3L 1586039 intron CG13917 + chr3L_13_1585001 chr3L_1585001 RAL-892 1136 chr3L 1666557 1666562 chr3L 1666715 1666720 4 158 8.0 24.5 16.2 0.2 163 chr3L 1666557 3` UTR,3` UTR CG7974 +,Uhg7 - chr3L 1666638 intron Uhg7 - chr3L 1666720 intron,3` UTR Uhg7 -,snoRNA:Me28S-A2634b - chr3L_4_1665001 chr3L_1665001 RAL-892 1137 chr3L 1740837 1740881 chr3L 1741102 1741144 pogo 13 255 4.0 2.0 3.0 3.2 307 chr3L 1740837 intron Gk + chr3L 1740990 intron Gk + chr3L 1741144 intron Gk + chr3L_13_1740001 chr3L_1740001 RAL-892 1138 chr3L 1805680 1805700 chr3L 1805874 1805894 10 194 3.5 4.0 3.8 2.1 214 chr3L 1805680 exon CG42676 + chr3L 1805787 intron CG42676 + chr3L 1805894 intron CG42676 + chr3L_10_1805001 chr3L_1805001 RAL-892 1139 chr3L 1853029 1853044 chr3L 1853133 1853148 4 104 4.5 4.5 4.5 0.7 119 chr3L 1853029 intron CG13936 - chr3L 1853088 intron CG13936 - chr3L 1853148 intron CG13936 - chr3L_4_1850001 chr3L_1850001 RAL-892 1140 chr3L 1924950 1924977 chr3L 1925108 1925135 7 158 2.0 3.5 2.8 1.8 185 chr3L 1924950 exon Dbx + chr3L 1925042 intron Dbx + chr3L 1925135 intron Dbx + chr3L_7_1925001 chr3L_1925001 RAL-892 1141 chr3L 1991116 1991144 chr3L 1991207 1991242 15 96 5.0 4.5 4.8 2.6 126 chr3L 1991116 intergenic not near genes chr3L 1991179 intergenic not near genes chr3L 1991242 intergenic not near genes chr3L_15_1990001 chr3L_1990001 RAL-892 1142 chr3L 2108236 2108280 chr3L 2113460 2113504 copia 17 5224 5.5 6.0 5.8 2.5 5268 chr3L 2108236 intron sls - chr3L 2110870 intron sls - chr3L 2113504 intron sls - chr3L_17_2110001 chr3L_2110001 RAL-892 1143 chr3L 2139206 2139227 chr3L 2139307 2139328 9 100 4.5 6.0 5.2 1.5 122 chr3L 2139206 intron zormin - chr3L 2139267 intron zormin - chr3L 2139328 intron zormin - chr3L_9_2135001 chr3L_2135001 RAL-892 1144 chr3L 2168758 2168806 chr3L 2168869 2168898 15 109 2.5 3.5 3.0 3.8 140 chr3L 2168758 exon CG15879 - chr3L 2168828 intron CG15879 - chr3L 2168898 intron CG15879 - chr3L_15_2165001 chr3L_2165001 RAL-892 1145 chr3L 2176675 2176715 chr3L 2177094 2177144 9 426 3.5 1.0 2.2 2.8 469 chr3L 2176675 intergenic not near genes chr3L 2176910 intergenic not near genes chr3L 2177144 intergenic not near genes chr3L_9_2175001 chr3L_2175001 RAL-892 1146 chr3L 2199792 2199820 chr3L 2199885 2199916 11 95 0.0 4.0 2.0 3.7 124 chr3L 2199792 intergenic not near genes chr3L 2199854 intergenic not near genes chr3L 2199916 intergenic not near genes chr3L_11_2195001 chr3L_2195001 RAL-892 1147 chr3L 2282973 2283023 chr3L 2283069 2283113 9 95 4.5 4.5 4.5 1.6 140 chr3L 2282973 5` UTR MsR2 + chr3L 2283043 5` UTR MsR2 + chr3L 2283113 5` UTR MsR2 + chr3L_9_2280001 chr3L_2280001 RAL-892 1148 chr3L 2307994 2308012 chr3L 2308120 2308138 6 123 4.5 3.0 3.8 1.2 144 chr3L 2307994 intergenic not near genes chr3L 2308066 intergenic not near genes chr3L 2308138 intergenic not near genes chr3L_6_2305001 chr3L_2305001 RAL-892 1149 chr3L 2308014 2308029 chr3L 2308116 2308155 4 113 2.0 2.0 2.0 1.3 141 chr3L 2308014 intergenic not near genes chr3L 2308084 intergenic not near genes chr3L 2308155 intergenic not near genes chr3L_4_2305001 chr3L_2305001 RAL-892 1150 chr3L 2382693 2382736 chr3L 2382795 2382836 12 94 2.5 4.5 3.5 2.7 143 chr3L 2382693 intergenic not near genes chr3L 2382764 intergenic not near genes chr3L 2382836 intergenic not near genes chr3L_12_2380001 chr3L_2380001 RAL-892 1151 chr3L 2447486 2447532 chr3L 2456662 2456708 roo 17 9173 4.0 4.0 4.0 3.4 9222 chr3L 2447486 intron CG45186 + chr3L 2452097 intron CG45186 + chr3L 2456708 intron CG45186 + chr3L_17_2450001 chr3L_2450001 RAL-892 1152 chr3L 2467477 2467484 chr3L 2467594 2467601 5 117 4.5 0.0 2.2 1.6 124 chr3L 2467477 intron CG45186 + chr3L 2467539 intron CG45186 + chr3L 2467601 intron CG45186 + chr3L_5_2465001 chr3L_2465001 RAL-892 1153 chr3L 2480287 2480330 chr3L 2480407 2480423 4 113 3.5 5.5 4.5 0.7 136 chr3L 2480287 intron CG45186 + chr3L 2480355 intron CG45186 + chr3L 2480423 intron CG45186 + chr3L_4_2480001 chr3L_2480001 RAL-892 1154 chr3L 2493808 2493848 chr3L 2493906 2493956 5 104 2.0 0.0 1.0 2.5 148 chr3L 2493808 intron CG45186 + chr3L 2493882 intron CG45186 + chr3L 2493956 intron CG45186 + chr3L_5_2490001 chr3L_2490001 RAL-892 1155 chr3L 2533657 2533678 chr3L 2533732 2533780 4 90 5.0 5.0 5.0 0.7 123 chr3L 2533657 intron Spn - chr3L 2533718 intron Spn - chr3L 2533780 intron Spn - chr3L_4_2530001 chr3L_2530001 RAL-892 1156 chr3L 2561508 2561556 chr3L 2561605 2561653 14 97 5.0 4.0 4.5 2.5 145 chr3L 2561508 intron msn - chr3L 2561580 intron msn - chr3L 2561653 intron msn - chr3L_14_2560001 chr3L_2560001 RAL-892 1157 chr3L 2581877 2581907 chr3L 2581991 2582021 10 113 0.0 1.5 0.8 5.6 144 chr3L 2581877 intron msn - chr3L 2581949 intron msn - chr3L 2582021 intron msn - chr3L_10_2580001 chr3L_2580001 RAL-892 1158 chr3L 2657081 2657128 chr3L 2657182 2657229 14 100 2.5 2.0 2.2 4.4 148 chr3L 2657081 3` UTR Fife - chr3L 2657155 3` UTR Fife - chr3L 2657229 3` UTR Fife - chr3L_14_2655001 chr3L_2655001 RAL-892 1159 chr3L 2683924 2683970 chr3L 2684020 2684065 13 96 5.0 4.0 4.5 2.4 141 chr3L 2683924 intron Fife - chr3L 2683994 intron Fife - chr3L 2684065 intron Fife - chr3L_13_2680001 chr3L_2680001 RAL-892 1160 chr3L 2719517 2719558 chr3L 2719639 2719680 12 122 2.5 4.0 3.2 2.9 163 chr3L 2719517 3` UTR Mrtf - chr3L 2719598 3` UTR Mrtf - chr3L 2719680 3` UTR Mrtf - chr3L_12_2715001 chr3L_2715001 RAL-892 1161 chr3L 2731505 2731510 chr3L 2731607 2731612 4 102 3.5 6.5 5.0 0.7 107 chr3L 2731505 intron Mrtf - chr3L 2731558 intron Mrtf - chr3L 2731612 intron Mrtf - chr3L_4_2730001 chr3L_2730001 RAL-892 1162 chr3L 2731521 2731536 chr3L 2731598 2731638 5 96 3.0 4.5 3.8 1.0 117 chr3L 2731521 intron Mrtf - chr3L 2731580 intron Mrtf - chr3L 2731638 intron Mrtf - chr3L_5_2730001 chr3L_2730001 RAL-892 1163 chr3L 2751442 2751459 chr3L 2755757 2755774 F-element 10 4315 11.0 8.5 9.8 0.9 4332 chr3L 2751442 intron Mrtf - chr3L 2753608 intron Mrtf - chr3L 2755774 intron Mrtf - chr3L_10_2750001 chr3L_2750001 RAL-892 1164 chr3L 2795703 2795756 chr3L 2795846 2795880 19 140 2.5 3.0 2.8 5.0 177 chr3L 2795703 intron CG43444 - chr3L 2795792 intron CG43444 - chr3L 2795880 intron CG43444 - chr3L_19_2795001 chr3L_2795001 RAL-892 1165 chr3L 2810211 2810253 chr3L 2810310 2810352 11 98 2.0 2.0 2.0 3.7 141 chr3L 2810211 intron CG43444 - chr3L 2810282 intron CG43444 - chr3L 2810352 intron CG43444 - chr3L_11_2810001 chr3L_2810001 RAL-892 1166 chr3L 2812314 2812364 chr3L 2812416 2812468 12 101 4.5 0.0 2.2 3.8 154 chr3L 2812314 intron CG43444 - chr3L 2812391 intron CG43444 - chr3L 2812468 intron CG43444 - chr3L_12_2810001 chr3L_2810001 RAL-892 1167 chr3L 2927820 2927872 chr3L 2936117 2936128 Tirant 13 8293 3.0 3.5 3.2 3.1 8308 chr3L 2927820 intron Shab + chr3L 2931974 intron Shab + chr3L 2936128 intron Shab + chr3L_13_2930001 chr3L_2930001 RAL-892 1168 chr3L 2966704 2966718 chr3L 2974149 2974163 mdg1 6 7445 9.5 0.0 4.8 1.0 7459 chr3L 2966704 intergenic not near genes chr3L 2970434 intergenic not near genes chr3L 2974163 intergenic not near genes chr3L_6_2970001 chr3L_2970001 RAL-892 1169 chr3L 3040305 3040331 chr3L 3042114 3042140 S-element 6 1808 6.0 0.5 3.2 1.4 1835 chr3L 3040305 3` UTR CG2162 + chr3L 3041222 intergenic not near genes chr3L 3042140 intergenic Jafrac2 + chr3L_6_3040001 chr3L_3040001 RAL-892 1170 chr3L 3051723 3051749 chr3L 3051985 3052011 pogo 13 262 8.5 2.0 5.2 2.1 288 chr3L 3051723 3` UTR CG32485 + chr3L 3051867 intergenic CG32485 + chr3L 3052011 intergenic CG32485 + chr3L_13_3050001 chr3L_3050001 RAL-892 1171 chr3L 3103431 3103466 chr3L 3103527 3103562 4 96 8.0 4.5 6.2 0.6 131 chr3L 3103431 intron Cht7 - chr3L 3103496 intron Cht7 - chr3L 3103562 intron Cht7 - chr3L_4_3100001 chr3L_3100001 RAL-892 1172 chr3L 3178707 3178747 chr3L 3178810 3178850 12 102 6.0 4.5 5.2 1.9 143 chr3L 3178707 intergenic CG14964 -,Girdin + chr3L 3178778 intergenic Girdin +,CG14964 - chr3L 3178850 intergenic Girdin +,CG14964 - chr3L_12_3175001 chr3L_3175001 RAL-892 1173 chr3L 3252324 3252374 chr3L 3252420 3252470 7 96 3.0 1.0 2.0 2.3 146 chr3L 3252324 5` UTR CR43626 + chr3L 3252397 5` UTR CR43626 + chr3L 3252470 5` UTR CR43626 + chr3L_7_3250001 chr3L_3250001 RAL-892 1174 chr3L 3259601 3259652 chr3L 3259716 3259757 12 109 7.0 4.5 5.8 1.8 156 chr3L 3259601 intron ckd + chr3L 3259679 intron ckd + chr3L 3259757 intron ckd + chr3L_12_3255001 chr3L_3255001 RAL-892 1175 chr3L 3281438 3281453 chr3L 3281954 3281964 Doc 4 515 4.0 4.0 4.0 0.8 526 chr3L 3281438 intron CG12017 + chr3L 3281701 intron CG12017 + chr3L 3281964 intron CG12017 + chr3L_4_3280001 chr3L_3280001 RAL-892 1176 chr3L 3281454 3281471 chr3L 3281946 3281987 Doc 8 506 3.0 3.5 3.2 1.9 533 chr3L 3281454 intron CG12017 + chr3L 3281720 intron CG12017 + chr3L 3281987 intron CG12017 + chr3L_8_3280001 chr3L_3280001 RAL-892 1177 chr3L 3470136 3470187 chr3L 3470232 3470283 14 96 0.0 3.5 1.8 5.0 147 chr3L 3470136 intron CG14971 - chr3L 3470210 intron CG14971 - chr3L 3470283 intron CG14971 - chr3L_14_3470001 chr3L_3470001 RAL-892 1178 chr3L 3475058 3475106 chr3L 3475522 3475545 jockey 8 459 0.5 1.5 1.0 4.0 487 chr3L 3475058 intron CG42324 + chr3L 3475302 intron CG42324 + chr3L 3475545 intron CG42324 + chr3L_8_3475001 chr3L_3475001 RAL-892 1179 chr3L 3517855 3517884 chr3L 3517973 3517988 11 117 4.0 4.5 4.2 2.1 133 chr3L 3517855 intron Eip63E + chr3L 3517922 intron Eip63E + chr3L 3517988 intron Eip63E + chr3L_11_3515001 chr3L_3515001 RAL-892 1180 chr3L 3539028 3539070 chr3L 3539135 3539178 19 108 4.0 4.0 4.0 3.8 150 chr3L 3539028 intron Eip63E + chr3L 3539103 intron Eip63E + chr3L 3539178 intron Eip63E + chr3L_19_3535001 chr3L_3535001 RAL-892 1181 chr3L 3539966 3539985 chr3L 3540075 3540094 9 109 3.0 2.5 2.8 2.4 128 chr3L 3539966 intron Eip63E + chr3L 3540030 intron Eip63E + chr3L 3540094 intron Eip63E + chr3L_9_3540001 chr3L_3540001 RAL-892 1182 chr3L 3573153 3573190 chr3L 3573256 3573293 15 102 5.0 5.5 5.2 2.4 140 chr3L 3573153 intron Eip63E + chr3L 3573223 intron Eip63E + chr3L 3573293 intron Eip63E + chr3L_15_3570001 chr3L_3570001 RAL-892 1183 chr3L 3601281 3601325 chr3L 3606612 3606639 copia 12 5329 3.5 4.0 3.8 2.5 5358 chr3L 3601281 intron Eip63E + chr3L 3603960 intron Eip63E + chr3L 3606639 intron Eip63E + chr3L_12_3600001 chr3L_3600001 RAL-892 1184 chr3L 3642133 3642181 chr3L 3642259 3642307 14 126 2.5 2.5 2.5 4.0 174 chr3L 3642133 intron dar1 + chr3L 3642220 intron dar1 + chr3L 3642307 intron dar1 + chr3L_14_3640001 chr3L_3640001 RAL-892 1185 chr3L 3709439 3709453 chr3L 3709541 3709555 7 102 3.0 1.0 2.0 2.3 116 chr3L 3709439 intergenic CR45675 + chr3L 3709497 intergenic CR45675 + chr3L 3709555 intergenic not near genes chr3L_7_3705001 chr3L_3705001 RAL-892 1186 chr3L 3763738 3763767 chr3L 3763839 3763860 5 99 2.0 0.0 1.0 2.5 122 chr3L 3763738 intron CG32264 - chr3L 3763799 intron CG32264 - chr3L 3763860 intron CG32264 - chr3L_5_3760001 chr3L_3760001 RAL-892 1187 chr3L 3766733 3766739 chr3L 3766839 3766845 5 106 3.0 0.0 1.5 2.0 112 chr3L 3766733 intron CG32264 - chr3L 3766789 intron CG32264 - chr3L 3766845 intron CG32264 - chr3L_5_3765001 chr3L_3765001 RAL-892 1188 chr3L 3783250 3783268 chr3L 3783347 3783365 6 97 8.0 2.0 5.0 1.0 115 chr3L 3783250 intron CG32264 - chr3L 3783308 intron CG32264 - chr3L 3783365 intron CG32264 - chr3L_6_3780001 chr3L_3780001 RAL-892 1189 chr3L 3795482 3795531 chr3L 3795675 3795724 11 193 2.5 2.0 2.2 3.4 242 chr3L 3795482 intron CG32264 - chr3L 3795603 intron CG32264 - chr3L 3795724 intron CG32264 - chr3L_11_3795001 chr3L_3795001 RAL-892 1190 chr3L 3797229 3797254 chr3L 3797332 3797357 5 103 1.5 4.5 3.0 1.2 128 chr3L 3797229 intron CG32264 - chr3L 3797293 intron CG32264 - chr3L 3797357 intron CG32264 - chr3L_5_3795001 chr3L_3795001 RAL-892 1191 chr3L 3890952 3890984 chr3L 3891053 3891079 10 100 5.0 0.0 2.5 2.9 127 chr3L 3890952 intergenic not near genes chr3L 3891016 intergenic not near genes chr3L 3891079 intergenic not near genes chr3L_10_3890001 chr3L_3890001 RAL-892 1192 chr3L 3925987 3926040 chr3L 3926098 3926153 5 112 3.0 0.0 1.5 2.0 166 chr3L 3925987 intron Eip63F-1 - chr3L 3926070 intron Eip63F-1 - chr3L 3926153 intron Eip63F-1 - chr3L_5_3925001 chr3L_3925001 RAL-892 1193 chr3L 4048409 4048448 chr3L 4048521 4048560 5 112 2.0 6.5 4.2 1.0 151 chr3L 4048409 intron CG1136 + chr3L 4048484 intron CG1136 + chr3L 4048560 intron CG1136 + chr3L_5_4045001 chr3L_4045001 RAL-892 1194 chr3L 4109783 4109821 chr3L 4110273 4110306 4 486 4.5 1.0 2.8 1.1 523 chr3L 4109783 intron Ack + chr3L 4110044 intron Ack + chr3L 4110306 intron Ack + chr3L_4_4110001 chr3L_4110001 RAL-892 1195 chr3L 4146801 4146839 chr3L 4146903 4146941 9 102 0.0 6.0 3.0 2.2 140 chr3L 4146801 intergenic not near genes chr3L 4146871 intergenic not near genes chr3L 4146941 intergenic not near genes chr3L_9_4145001 chr3L_4145001 RAL-892 1196 chr3L 4164779 4164792 chr3L 4164875 4164888 6 96 2.5 0.0 1.2 2.7 109 chr3L 4164779 exon mas - chr3L 4164834 intron mas - chr3L 4164888 exon mas - chr3L_6_4160001 chr3L_4160001 RAL-892 1197 chr3L 4170149 4170167 chr3L 4170247 4170265 6 98 1.0 7.0 4.0 1.2 116 chr3L 4170149 intergenic Ero1L + chr3L 4170207 intergenic Ero1L + chr3L 4170265 intergenic Ero1L + chr3L_6_4170001 chr3L_4170001 RAL-892 1198 chr3L 4328735 4328761 chr3L 4336251 4336279 412 11 7516 4.5 3.5 4.0 2.2 7544 chr3L 4328735 intron Cip4 - chr3L 4332507 intron Cip4 - chr3L 4336279 exon Cip4 - chr3L_11_4330001 chr3L_4330001 RAL-892 1199 chr3L 4337574 4337595 chr3L 4337703 4337724 6 129 1.5 9.5 5.5 0.9 150 chr3L 4337574 intron Cip4 - chr3L 4337649 intron Cip4 - chr3L 4337724 intron Cip4 - chr3L_6_4335001 chr3L_4335001 RAL-892 1200 chr3L 4416131 4416175 chr3L 4416455 4416506 17 328 3.0 6.5 4.8 2.9 375 chr3L 4416131 intron DOR + chr3L 4416318 intron DOR + chr3L 4416506 intron DOR + chr3L_17_4415001 chr3L_4415001 RAL-892 1201 chr3L 4441817 4441860 chr3L 4441916 4441959 8 93 4.0 3.0 3.5 1.8 142 chr3L 4441817 intergenic not near genes chr3L 4441888 intergenic not near genes chr3L 4441959 intergenic not near genes chr3L_8_4440001 chr3L_4440001 RAL-892 1202 chr3L 4487914 4487948 chr3L 4488211 4488233 8 296 10.0 15.0 12.5 0.6 319 chr3L 4487914 intron CG13722 - chr3L 4488074 intron CG13722 - chr3L 4488233 intron CG13722 - chr3L_8_4485001 chr3L_4485001 RAL-892 1203 chr3L 4487904 4487912 chr3L 4488421 4488429 5 517 13.0 24.5 18.8 0.3 525 chr3L 4487904 intron CG13722 - chr3L 4488166 intron CG13722 - chr3L 4488429 intron CG13722 - chr3L_5_4485001 chr3L_4485001 RAL-892 1204 chr3L 4487900 4487947 chr3L 4488437 4488464 7 521 10.0 24.0 17.0 0.4 564 chr3L 4487900 intron CG13722 - chr3L 4488182 intron CG13722 - chr3L 4488464 intron CG13722 - chr3L_7_4485001 chr3L_4485001 RAL-892 1205 chr3L 4553853 4553864 chr3L 4553979 4553990 4 126 0.0 5.0 2.5 1.1 137 chr3L 4553853 intergenic CG11357 + chr3L 4553922 intergenic CG11357 + chr3L 4553990 intergenic not near genes chr3L_4_4550001 chr3L_4550001 RAL-892 1206 chr3L 4554127 4554153 chr3L 4554282 4554310 6 157 1.0 1.0 1.0 3.0 183 chr3L 4554127 intergenic CG33777 - chr3L 4554218 intergenic CG33777 - chr3L 4554310 intergenic CG33777 - chr3L_6_4550001 chr3L_4550001 RAL-892 1207 chr3L 4607245 4607292 chr3L 4607356 4607403 10 108 3.5 5.0 4.2 1.9 158 chr3L 4607245 intron Src64B - chr3L 4607324 intron Src64B - chr3L 4607403 intron Src64B - chr3L_10_4605001 chr3L_4605001 RAL-892 1208 chr3L 4754741 4754773 chr3L 4754837 4754869 7 96 3.0 3.0 3.0 1.8 128 chr3L 4754741 intron RhoGEF64C + chr3L 4754805 intron RhoGEF64C + chr3L 4754869 intron RhoGEF64C + chr3L_7_4750001 chr3L_4750001 RAL-892 1209 chr3L 4782090 4782123 chr3L 4782205 4782242 9 118 3.5 1.5 2.5 2.6 152 chr3L 4782090 intron RhoGEF64C + chr3L 4782166 intron RhoGEF64C + chr3L 4782242 intron RhoGEF64C + chr3L_9_4780001 chr3L_4780001 RAL-892 1210 chr3L 4837869 4837920 chr3L 4837968 4838019 21 98 4.0 6.0 5.0 3.5 150 chr3L 4837869 3` UTR CG13707 - chr3L 4837944 3` UTR CG13707 - chr3L 4838019 3` UTR CG13707 - chr3L_21_4835001 chr3L_4835001 RAL-892 1211 chr3L 4840409 4840420 chr3L 4840536 4840549 6 129 0.5 5.0 2.8 1.6 140 chr3L 4840409 intergenic CG13707 - chr3L 4840479 intergenic CG13707 - chr3L 4840549 intergenic CG13707 - chr3L_6_4840001 chr3L_4840001 RAL-892 1212 chr3L 4858303 4858330 chr3L 4858403 4858434 9 99 5.0 3.5 4.2 1.7 131 chr3L 4858303 intergenic not near genes chr3L 4858368 intergenic not near genes chr3L 4858434 intergenic not near genes chr3L_9_4855001 chr3L_4855001 RAL-892 1213 chr3L 4901113 4901158 chr3L 4907323 4907368 diver 10 6210 3.0 4.0 3.5 2.2 6255 chr3L 4901113 intergenic CG13704 + chr3L 4904240 intergenic not near genes chr3L 4907368 intergenic not near genes chr3L_10_4900001 chr3L_4900001 RAL-892 1214 chr3L 4908885 4908929 chr3L 4909013 4909054 10 127 2.0 1.0 1.5 4.0 169 chr3L 4908885 intergenic not near genes chr3L 4908970 intergenic not near genes chr3L 4909054 intergenic not near genes chr3L_10_4905001 chr3L_4905001 RAL-892 1215 chr3L 4925779 4925823 chr3L 4925931 4925975 9 152 3.0 4.0 3.5 2.0 196 chr3L 4925779 intergenic not near genes chr3L 4925877 intergenic not near genes chr3L 4925975 intergenic not near genes chr3L_9_4925001 chr3L_4925001 RAL-892 1216 chr3L 4990727 4990760 chr3L 4990859 4990865 5 128 3.0 2.0 2.5 1.4 138 chr3L 4990727 intron Con - chr3L 4990796 intron Con - chr3L 4990865 intron Con - chr3L_5_4990001 chr3L_4990001 RAL-892 1217 chr3L 5034138 5034187 chr3L 5043309 5043359 roo 13 9169 3.0 0.5 1.8 4.6 9221 chr3L 5034138 intron Con - chr3L 5038748 intron Con - chr3L 5043359 intron Con - chr3L_13_5035001 chr3L_5035001 RAL-892 1218 chr3L 5045438 5045452 chr3L 5050239 5050252 Doc 5 4801 13.5 1.0 7.2 0.6 4814 chr3L 5045438 intron Con - chr3L 5047845 intron Con - chr3L 5050252 intron Con - chr3L_5_5045001 chr3L_5045001 RAL-892 1219 chr3L 5045458 5045474 chr3L 5050237 5050275 Doc 7 4797 6.0 1.0 3.5 1.6 4817 chr3L 5045458 intron Con - chr3L 5047866 intron Con - chr3L 5050275 intron Con - chr3L_7_5045001 chr3L_5045001 RAL-892 1220 chr3L 5054933 5054957 chr3L 5055032 5055043 5 96 3.5 8.5 6.0 0.7 110 chr3L 5054933 intron Con - chr3L 5054988 intron Con - chr3L 5055043 intron Con - chr3L_5_5050001 chr3L_5050001 RAL-892 1221 chr3L 5054962 5054971 chr3L 5055021 5055067 5 84 3.0 8.0 5.5 0.8 105 chr3L 5054962 intron Con - chr3L 5055014 intron Con - chr3L 5055067 intron Con - chr3L_5_5055001 chr3L_5055001 RAL-892 1222 chr3L 5066283 5066318 chr3L 5066402 5066437 6 119 5.5 5.0 5.2 1.0 154 chr3L 5066283 intron Con - chr3L 5066360 intron Con - chr3L 5066437 intron Con - chr3L_6_5065001 chr3L_5065001 RAL-892 1223 chr3L 5089128 5089146 chr3L 5089226 5089244 8 98 0.0 6.5 3.2 1.9 116 chr3L 5089128 intergenic not near genes chr3L 5089186 intergenic not near genes chr3L 5089244 intergenic not near genes chr3L_8_5085001 chr3L_5085001 RAL-892 1224 chr3L 5104467 5104505 chr3L 5124621 5124659 12 20153 3.5 4.0 3.8 2.5 20192 chr3L 5104467 intergenic not near genes chr3L 5114563 intergenic not near genes chr3L 5124659 intergenic not near genes chr3L_12_5110001 chr3L_5110001 RAL-892 1225 chr3L 5203077 5203113 chr3L 5203202 5203238 12 123 3.5 3.0 3.2 2.9 161 chr3L 5203077 intron shep - chr3L 5203158 intron shep - chr3L 5203238 intron shep - chr3L_12_5200001 chr3L_5200001 RAL-892 1226 chr3L 5212229 5212269 chr3L 5212322 5212372 12 98 3.5 2.5 3.0 3.0 143 chr3L 5212229 intron shep - chr3L 5212300 intron shep - chr3L 5212372 intron shep - chr3L_12_5210001 chr3L_5210001 RAL-892 1227 chr3L 5251855 5251868 chr3L 5251954 5251967 5 99 0.0 9.0 4.5 0.9 112 chr3L 5251855 intron shep - chr3L 5251911 intron shep - chr3L 5251967 intron shep - chr3L_5_5250001 chr3L_5250001 RAL-892 1228 chr3L 5271172 5271195 chr3L 5271270 5271281 6 95 0.0 0.0 0.0 6.0 109 chr3L 5271172 intron shep - chr3L 5271226 intron shep - chr3L 5271281 intron shep - chr3L_6_5270001 chr3L_5270001 RAL-892 1229 chr3L 5490377 5490419 chr3L 5490537 5490555 11 159 2.5 0.5 1.5 4.4 178 chr3L 5490377 intergenic not near genes chr3L 5490466 intergenic not near genes chr3L 5490555 intergenic not near genes chr3L_11_5490001 chr3L_5490001 RAL-892 1230 chr3L 5498382 5498423 chr3L 5498477 5498517 4 96 0.0 3.5 1.8 1.4 135 chr3L 5498382 exon blanks - chr3L 5498450 exon blanks - chr3L 5498517 exon blanks - chr3L_4_5495001 chr3L_5495001 RAL-892 1231 chr3L 5504549 5504565 chr3L 5504647 5504663 6 98 7.0 2.0 4.5 1.1 114 chr3L 5504549 intron CG34342 - chr3L 5504606 intron CG34342 - chr3L 5504663 intron CG34342 - chr3L_6_5500001 chr3L_5500001 RAL-892 1232 chr3L 5537704 5537758 chr3L 5538066 5538097 jockey 22 357 5.0 5.5 5.2 3.5 393 chr3L 5537704 intergenic not near genes chr3L 5537900 intergenic not near genes chr3L 5538097 intergenic CG10625 - chr3L_22_5535001 chr3L_5535001 RAL-892 1233 chr3L 5561657 5561691 chr3L 5561759 5561793 5 102 1.0 1.5 1.2 2.3 136 chr3L 5561657 intergenic Sucb -,sinu - chr3L 5561725 3` UTR Sucb - chr3L 5561793 3` UTR Sucb - chr3L_5_5560001 chr3L_5560001 RAL-892 1234 chr3L 5597121 5597127 chr3L 5597201 5597228 5 95 5.5 3.5 4.5 0.9 107 chr3L 5597121 exon CG5150 + chr3L 5597174 3` UTR CG5150 + chr3L 5597228 3` UTR CG5150 + chr3L_5_5595001 chr3L_5595001 RAL-892 1235 chr3L 5597131 5597137 chr3L 5597192 5597226 5 86 4.0 2.5 3.2 1.2 95 chr3L 5597131 exon CG5150 + chr3L 5597178 3` UTR CG5150 + chr3L 5597226 3` UTR CG5150 + chr3L_5_5595001 chr3L_5595001 RAL-892 1236 chr3L 5750026 5750069 chr3L 5750117 5750168 18 96 5.5 3.5 4.5 3.3 142 chr3L 5750026 intergenic DnaJ-1 -,sif + chr3L 5750097 3` UTR DnaJ-1 - chr3L 5750168 3` UTR DnaJ-1 - chr3L_18_5750001 chr3L_5750001 RAL-892 1237 chr3L 5785488 5785509 chr3L 5785590 5785617 5 107 4.0 8.5 6.2 0.7 129 chr3L 5785488 intron Cralbp - chr3L 5785552 intron Cralbp - chr3L 5785617 intron Cralbp - chr3L_5_5785001 chr3L_5785001 RAL-892 1238 chr3L 5826146 5826165 chr3L 5826235 5826239 13 97 5.0 4.0 4.5 2.4 93 chr3L 5826146 intron vn - chr3L 5826192 intron vn - chr3L 5826239 intron vn - chr3L_13_5825001 chr3L_5825001 RAL-892 1239 chr3L 5908058 5908100 chr3L 5908158 5908200 15 100 0.0 4.5 2.2 4.7 142 chr3L 5908058 intron CG13288 + chr3L 5908129 intron CG13288 + chr3L 5908200 intron CG13288 + chr3L_15_5905001 chr3L_5905001 RAL-892 1240 chr3L 5910014 5910055 chr3L 5910275 5910316 pogo 21 260 7.5 5.5 6.5 2.8 302 chr3L 5910014 intron CG13288 + chr3L 5910165 intron CG13288 + chr3L 5910316 intron CG13288 + chr3L_21_5910001 chr3L_5910001 RAL-892 1241 chr3L 5926317 5926341 chr3L 5926511 5926520 BS 7 194 7.0 5.5 6.2 1.0 203 chr3L 5926317 intron Vap-33B + chr3L 5926418 intron Vap-33B + chr3L 5926520 intron Vap-33B + chr3L_7_5925001 chr3L_5925001 RAL-892 1242 chr3L 6001665 6001713 chr3L 6004385 6004433 jockey 12 2720 3.5 3.0 3.2 2.9 2768 chr3L 6001665 intron PVRAP + chr3L 6003049 intron PVRAP + chr3L 6004433 intron PVRAP + chr3L_12_6000001 chr3L_6000001 RAL-892 1243 chr3L 6040349 6040393 chr3L 6042725 6042769 Doc 18 2375 3.0 7.5 5.2 2.9 2420 chr3L 6040349 intergenic Jon65Aiv + chr3L 6041559 intergenic not near genes chr3L 6042769 intergenic not near genes chr3L_18_6040001 chr3L_6040001 RAL-892 1244 chr3L 6050234 6050276 chr3L 6050405 6050446 10 166 3.0 1.5 2.2 3.1 212 chr3L 6050234 intergenic not near genes chr3L 6050340 intergenic Jon65Aiii + chr3L 6050446 intergenic Jon65Aiii + chr3L_10_6050001 chr3L_6050001 RAL-892 1245 chr3L 6052125 6052147 chr3L 6052231 6052253 8 105 0.0 5.0 2.5 2.3 128 chr3L 6052125 intergenic Jon65Aii +,Jon65Aiii + chr3L 6052189 intergenic Jon65Aii +,Jon65Aiii + chr3L 6052253 intergenic Jon65Aii + chr3L_8_6050001 chr3L_6050001 RAL-892 1246 chr3L 6119161 6119171 chr3L 6119258 6119268 5 97 3.0 10.5 6.8 0.6 107 chr3L 6119161 intron Ets65A + chr3L 6119214 intron Ets65A + chr3L 6119268 intron Ets65A + chr3L_5_6115001 chr3L_6115001 RAL-892 1247 chr3L 6155678 6155709 chr3L 6155784 6155815 15 105 4.0 5.0 4.5 2.7 137 chr3L 6155678 intergenic CR45421 - chr3L 6155746 intergenic not near genes chr3L 6155815 intergenic not near genes chr3L_15_6155001 chr3L_6155001 RAL-892 1248 chr3L 6220911 6220946 chr3L 6230083 6230118 roo 9 9171 5.5 7.0 6.2 1.2 9207 chr3L 6220911 5` UTR pncr008:3L + chr3L 6225514 intergenic not near genes chr3L 6230118 intergenic not near genes chr3L_9_6225001 chr3L_6225001 RAL-892 1249 chr3L 6335002 6335040 chr3L 6335482 6335531 297 9 486 2.0 3.5 2.8 2.4 529 chr3L 6335002 intron CG13300 - chr3L 6335266 intron CG13300 - chr3L 6335531 intron CG13300 - chr3L_9_6335001 chr3L_6335001 RAL-892 1250 chr3L 6402169 6402217 chr3L 6402271 6402321 11 101 6.5 2.5 4.5 2.0 152 chr3L 6402169 intron CG42747 + chr3L 6402245 intron CG42747 + chr3L 6402321 intron CG42747 + chr3L_11_6400001 chr3L_6400001 RAL-892 1251 chr3L 6652058 6652106 chr3L 6652156 6652203 18 98 5.5 6.5 6.0 2.6 145 chr3L 6652058 intergenic not near genes chr3L 6652130 intergenic not near genes chr3L 6652203 intergenic not near genes chr3L_18_6650001 chr3L_6650001 RAL-892 1252 chr3L 6778526 6778533 chr3L 6778639 6778646 5 113 0.0 5.0 2.5 1.4 120 chr3L 6778526 intergenic not near genes chr3L 6778586 intergenic not near genes chr3L 6778646 intergenic not near genes chr3L_5_6775001 chr3L_6775001 RAL-892 1253 chr3L 6781105 6781153 chr3L 6783138 6783183 Doc 7 2032 3.5 0.0 1.8 2.5 2078 chr3L 6781105 intergenic not near genes chr3L 6782144 intergenic not near genes chr3L 6783183 intergenic not near genes chr3L_7_6780001 chr3L_6780001 RAL-892 1254 chr3L 6806485 6806532 chr3L 6806592 6806638 15 103 2.5 5.0 3.8 3.1 153 chr3L 6806485 intergenic not near genes chr3L 6806562 intergenic not near genes chr3L 6806638 intergenic not near genes chr3L_15_6805001 chr3L_6805001 RAL-892 1255 chr3L 6810070 6810089 chr3L 6810172 6810177 5 95 4.0 9.0 6.5 0.7 107 chr3L 6810070 intergenic not near genes chr3L 6810124 intergenic not near genes chr3L 6810177 intergenic not near genes chr3L_5_6810001 chr3L_6810001 RAL-892 1256 chr3L 6835911 6835923 chr3L 6836009 6836021 5 98 4.0 3.0 3.5 1.1 110 chr3L 6835911 intergenic not near genes chr3L 6835966 intergenic not near genes chr3L 6836021 intergenic not near genes chr3L_5_6835001 chr3L_6835001 RAL-892 1257 chr3L 6855925 6855950 chr3L 6860715 6860751 Doc 6 4794 3.0 2.5 2.8 1.6 4826 chr3L 6855925 intergenic not near genes chr3L 6858338 intergenic not near genes chr3L 6860751 intergenic not near genes chr3L_6_6855001 chr3L_6855001 RAL-892 1258 chr3L 6887497 6887536 chr3L 6895009 6895048 roo 13 7511 4.0 5.0 4.5 2.4 7551 chr3L 6887497 intergenic not near genes chr3L 6891272 intergenic not near genes chr3L 6895048 intergenic not near genes chr3L_13_6890001 chr3L_6890001 RAL-892 1259 chr3L 6934326 6934361 chr3L 6934457 6934492 7 131 3.5 5.0 4.2 1.3 166 chr3L 6934326 exon CG14820 + chr3L 6934409 intron CG14820 + chr3L 6934492 exon CG14820 + chr3L_7_6930001 chr3L_6930001 RAL-892 1260 chr3L 6974502 6974521 chr3L 6974606 6974637 5 114 2.5 6.0 4.2 1.0 135 chr3L 6974502 intron Galphai - chr3L 6974570 intron Galphai - chr3L 6974637 intron Galphai - chr3L_5_6970001 chr3L_6970001 RAL-892 1261 chr3L 6981929 6981936 chr3L 6982103 6982110 4 174 0.0 6.0 3.0 1.0 181 chr3L 6981929 intergenic not near genes chr3L 6982020 intergenic not near genes chr3L 6982110 intergenic not near genes chr3L_4_6980001 chr3L_6980001 RAL-892 1262 chr3L 6990708 6990749 chr3L 6990808 6990849 9 98 1.5 3.0 2.2 2.8 141 chr3L 6990708 5` UTR bin + chr3L 6990778 5` UTR bin + chr3L 6990849 exon bin + chr3L_9_6990001 chr3L_6990001 RAL-892 1263 chr3L 6994871 6994915 chr3L 6995502 6995546 BS 13 631 0.0 4.5 2.2 4.1 675 chr3L 6994871 intergenic bin + chr3L 6995208 intergenic not near genes chr3L 6995546 intergenic not near genes chr3L_13_6995001 chr3L_6995001 RAL-892 1264 chr3L 7047464 7047475 chr3L 7047551 7047576 5 98 5.5 1.5 3.5 1.1 112 chr3L 7047464 intron Mp + chr3L 7047520 intron Mp + chr3L 7047576 intron Mp + chr3L_5_7045001 chr3L_7045001 RAL-892 1265 chr3L 7047479 7047493 chr3L 7047550 7047594 9 92 4.0 1.0 2.5 2.6 115 chr3L 7047479 intron Mp + chr3L 7047536 intron Mp + chr3L 7047594 intron Mp + chr3L_9_7045001 chr3L_7045001 RAL-892 1266 chr3L 7061390 7061406 chr3L 7061496 7061512 6 105 6.0 4.5 5.2 1.0 122 chr3L 7061390 intron CG8641 - chr3L 7061451 intron CG8641 - chr3L 7061512 intron CG8641 - chr3L_6_7060001 chr3L_7060001 RAL-892 1267 chr3L 7100158 7100179 chr3L 7100254 7100275 5 95 7.0 3.5 5.2 0.8 117 chr3L 7100158 intron form3 + chr3L 7100216 intron form3 + chr3L 7100275 intron form3 + chr3L_5_7100001 chr3L_7100001 RAL-892 1268 chr3L 7112568 7112612 chr3L 7112675 7112719 11 106 6.5 6.0 6.2 1.5 151 chr3L 7112568 intron form3 + chr3L 7112644 intron form3 + chr3L 7112719 intron form3 + chr3L_11_7110001 chr3L_7110001 RAL-892 1269 chr3L 7129935 7129981 chr3L 7130147 7130193 BS 12 212 7.5 3.0 5.2 1.9 258 chr3L 7129935 intergenic CG15829 + chr3L 7130064 intergenic CG15829 + chr3L 7130193 intergenic not near genes chr3L_12_7130001 chr3L_7130001 RAL-892 1270 chr3L 7175023 7175058 chr3L 7175267 7175308 19 249 3.0 4.5 3.8 4.0 285 chr3L 7175023 intron Dscam2 - chr3L 7175166 intron Dscam2 - chr3L 7175308 intron Dscam2 - chr3L_19_7175001 chr3L_7175001 RAL-892 1271 chr3L 7187383 7187419 chr3L 7187485 7187521 10 102 0.0 0.0 0.0 10.0 138 chr3L 7187383 intron Dscam2 - chr3L 7187452 intron Dscam2 - chr3L 7187521 intron Dscam2 - chr3L_10_7185001 chr3L_7185001 RAL-892 1272 chr3L 7244912 7244959 chr3L 7245024 7245041 9 104 3.5 1.0 2.2 2.8 129 chr3L 7244912 exon mei-P22 + chr3L 7244976 exon mei-P22 + chr3L 7245041 exon mei-P22 + chr3L_9_7240001 chr3L_7240001 RAL-892 1273 chr3L 7276190 7276240 chr3L 7276294 7276343 10 104 3.5 1.5 2.5 2.9 153 chr3L 7276190 intron unc-13-4A - chr3L 7276266 intron unc-13-4A - chr3L 7276343 intron unc-13-4A - chr3L_10_7275001 chr3L_7275001 RAL-892 1274 chr3L 7285444 7285475 chr3L 7285528 7285572 9 95 2.0 2.0 2.0 3.0 128 chr3L 7285444 intron unc-13-4A - chr3L 7285508 intron unc-13-4A - chr3L 7285572 intron unc-13-4A - chr3L_9_7285001 chr3L_7285001 RAL-892 1275 chr3L 7286423 7286472 chr3L 7286789 7286836 17 364 2.5 4.0 3.2 4.0 413 chr3L 7286423 intron unc-13-4A - chr3L 7286630 intron unc-13-4A - chr3L 7286836 intron unc-13-4A - chr3L_17_7285001 chr3L_7285001 RAL-892 1276 chr3L 7377298 7377346 chr3L 7380423 7380471 297 12 3125 6.5 6.0 6.2 1.7 3173 chr3L 7377298 intron SMSr - chr3L 7378884 intron SMSr - chr3L 7380471 intron SMSr - chr3L_12_7375001 chr3L_7375001 RAL-892 1277 chr3L 7488853 7488887 chr3L 7488954 7488985 10 101 3.0 4.5 3.8 2.1 132 chr3L 7488853 intergenic not near genes chr3L 7488919 intergenic not near genes chr3L 7488985 intergenic not near genes chr3L_10_7485001 chr3L_7485001 RAL-892 1278 chr3L 7498712 7498747 chr3L 7503538 7503573 F-element 6 4826 1.5 4.0 2.8 1.6 4861 chr3L 7498712 5` UTR CG8539 - chr3L 7501142 intergenic not near genes chr3L 7503573 intergenic not near genes chr3L_6_7500001 chr3L_7500001 RAL-892 1279 chr3L 7505397 7505439 chr3L 7505493 7505535 12 96 3.0 3.5 3.2 2.9 138 chr3L 7505397 intergenic CG7548 - chr3L 7505466 intergenic CG7548 - chr3L 7505535 intergenic CG7548 - chr3L_12_7505001 chr3L_7505001 RAL-892 1280 chr3L 7524133 7524171 chr3L 7524250 7524288 8 117 5.5 3.5 4.5 1.5 155 chr3L 7524133 intron ltl + chr3L 7524210 intron ltl + chr3L 7524288 intron ltl + chr3L_8_7520001 chr3L_7520001 RAL-892 1281 chr3L 7560336 7560364 chr3L 7560595 7560609 4 248 2.0 3.5 2.8 1.1 273 chr3L 7560336 intergenic CG14837 - chr3L 7560472 intergenic CG14837 - chr3L 7560609 intergenic not near genes chr3L_4_7560001 chr3L_7560001 RAL-892 1282 chr3L 7640694 7640744 chr3L 7640833 7640854 26 141 3.0 3.0 3.0 6.5 160 chr3L 7640694 intergenic CG7506 -,CG33276 - chr3L 7640774 intergenic CG7506 -,CG33276 - chr3L 7640854 exon CG7506 - chr3L_26_7640001 chr3L_7640001 RAL-892 1283 chr3L 7695511 7695520 chr3L 7695607 7695620 4 99 4.0 6.0 5.0 0.7 109 chr3L 7695511 intron,intron,5` UTR CG32373 +,Ank2 -,CG44195 - chr3L 7695566 intron,intron,5` UTR CG32373 +,Ank2 -,CG44195 - chr3L 7695620 intron,intron,5` UTR CG32373 +,Ank2 -,CG44195 - chr3L_4_7695001 chr3L_7695001 RAL-892 1284 chr3L 7749470 7749471 chr3L 11777678 11777678 5 4028208 17.0 9.0 13.0 0.4 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_5_9760001 chr3L_9760001 RAL-892 1285 chr3L 7760076 7760108 chr3L 7760172 7760194 6 94 5.0 4.0 4.5 1.1 118 chr3L 7760076 intergenic Hn + chr3L 7760135 intergenic Hn + chr3L 7760194 intergenic Hn + chr3L_6_7760001 chr3L_7760001 RAL-892 1286 chr3L 7793701 7793739 chr3L 7800773 7800806 297 12 7070 8.0 9.0 8.5 1.3 7105 chr3L 7793701 intron CG32369 - chr3L 7797254 intron CG32369 - chr3L 7800806 intron CG32369 - chr3L_12_7795001 chr3L_7795001 RAL-892 1287 chr3L 7877894 7877919 chr3L 7878143 7878157 7 246 1.0 5.0 3.0 1.8 263 chr3L 7877894 intron CG32365 + chr3L 7878026 intron CG32365 + chr3L 7878157 intron CG32365 + chr3L_7_7875001 chr3L_7875001 RAL-892 1288 chr3L 7886503 7886547 chr3L 7889041 7889084 Stalker4 9 2537 3.0 4.0 3.5 2.0 2581 chr3L 7886503 intron CG32365 + chr3L 7887794 intron CG32365 + chr3L 7889084 intron CG32365 + chr3L_9_7885001 chr3L_7885001 RAL-892 1289 chr3L 7916816 7916857 chr3L 7926007 7926048 roo 14 9191 6.0 5.0 5.5 2.2 9232 chr3L 7916816 3` UTR syd - chr3L 7921432 intron syd - chr3L 7926048 3` UTR syd - chr3L_14_7920001 chr3L_7920001 RAL-892 1290 chr3L 7985356 7985392 chr3L 7987705 7987741 NOF 15 2348 2.5 5.5 4.0 3.0 2385 chr3L 7985356 intron nmo + chr3L 7986548 intron nmo + chr3L 7987741 intron nmo + chr3L_15_7985001 chr3L_7985001 RAL-892 1291 chr3L 7998882 7998904 chr3L 7998985 7998996 7 101 0.0 2.0 1.0 3.5 114 chr3L 7998882 intron nmo + chr3L 7998939 intron nmo + chr3L 7998996 intron nmo + chr3L_7_7995001 chr3L_7995001 RAL-892 1292 chr3L 8064595 8064632 chr3L 8064829 8064868 10 235 1.5 2.5 2.0 3.3 273 chr3L 8064595 intron Ect4 + chr3L 8064732 intron Ect4 + chr3L 8064868 intron Ect4 + chr3L_10_8060001 chr3L_8060001 RAL-892 1293 chr3L 8081280 8081306 chr3L 8081403 8081429 6 123 1.5 4.0 2.8 1.6 149 chr3L 8081280 intron Ect4 + chr3L 8081354 intron Ect4 + chr3L 8081429 intron Ect4 + chr3L_6_8080001 chr3L_8080001 RAL-892 1294 chr3L 8149746 8149795 chr3L 8149872 8149920 9 126 1.5 3.0 2.2 2.8 174 chr3L 8149746 intron CG13676 - chr3L 8149833 intron CG13676 - chr3L 8149920 intron CG13676 - chr3L_9_8145001 chr3L_8145001 RAL-892 1295 chr3L 8208107 8208155 chr3L 8208259 8208307 15 146 2.5 3.0 2.8 3.9 200 chr3L 8208107 intergenic not near genes chr3L 8208207 intergenic not near genes chr3L 8208307 intergenic not near genes chr3L_15_8205001 chr3L_8205001 RAL-892 1296 chr3L 8210783 8210806 chr3L 8210918 8210941 8 134 5.0 3.0 4.0 1.6 158 chr3L 8210783 intergenic CG32364 - chr3L 8210862 intergenic CG32364 - chr3L 8210941 intergenic CG32364 - chr3L_8_8210001 chr3L_8210001 RAL-892 1297 chr3L 8243797 8243846 chr3L 8243900 8243949 15 103 2.0 5.0 3.5 3.3 152 chr3L 8243797 intron Dscam4 + chr3L 8243873 intron Dscam4 + chr3L 8243949 intron Dscam4 + chr3L_15_8240001 chr3L_8240001 RAL-892 1298 chr3L 8248304 8248331 chr3L 8248414 8248426 5 107 5.0 6.0 5.5 0.8 122 chr3L 8248304 intron Dscam4 + chr3L 8248365 intron Dscam4 + chr3L 8248426 intron Dscam4 + chr3L_5_8245001 chr3L_8245001 RAL-892 1299 chr3L 8274818 8274827 chr3L 8274952 8274961 4 134 4.0 0.0 2.0 1.3 143 chr3L 8274818 intron Dscam4 + chr3L 8274890 intron Dscam4 + chr3L 8274961 intron Dscam4 + chr3L_4_8270001 chr3L_8270001 RAL-892 1300 chr3L 8371730 8371760 chr3L 8371836 8371866 8 106 0.0 7.0 3.5 1.8 136 chr3L 8371730 intergenic not near genes chr3L 8371798 intergenic not near genes chr3L 8371866 intergenic not near genes chr3L_8_8370001 chr3L_8370001 RAL-892 1301 chr3L 8443553 8443578 chr3L 8443654 8443680 4 102 4.0 3.0 3.5 0.9 127 chr3L 8443553 3` UTR CG6983 - chr3L 8443616 3` UTR CG6983 - chr3L 8443680 3` UTR CG6983 - chr3L_4_8440001 chr3L_8440001 RAL-892 1302 chr3L 8456480 8456488 chr3L 8456571 8456599 5 101 5.0 9.5 7.2 0.6 119 chr3L 8456480 intron Gug + chr3L 8456540 intron Gug + chr3L 8456599 intron Gug + chr3L_5_8455001 chr3L_8455001 RAL-892 1303 chr3L 8497876 8497913 chr3L 8498002 8498039 8 126 3.0 6.0 4.5 1.5 163 chr3L 8497876 intron CG43163 - chr3L 8497958 intron CG43163 - chr3L 8498039 intron CG43163 - chr3L_8_8495001 chr3L_8495001 RAL-892 1304 chr3L 8498298 8498330 chr3L 8505785 8505817 blood 8 7485 0.0 9.5 4.8 1.4 7519 chr3L 8498298 intron CG43163 - chr3L 8502058 intron CG43163 - chr3L 8505817 intron CG43163 - chr3L_8_8500001 chr3L_8500001 RAL-892 1305 chr3L 8643653 8643671 chr3L 8643753 8643759 10 101 0.0 7.0 3.5 2.2 106 chr3L 8643653 intergenic Cpr66D + chr3L 8643706 intergenic Cpr66D + chr3L 8643759 intergenic Cpr66D + chr3L_10_8640001 chr3L_8640001 RAL-892 1306 chr3L 8679728 8679757 chr3L 8679828 8679857 8 100 1.0 3.5 2.2 2.5 129 chr3L 8679728 intergenic h + chr3L 8679792 intergenic not near genes chr3L 8679857 intergenic not near genes chr3L_8_8675001 chr3L_8675001 RAL-892 1307 chr3L 8691138 8691191 chr3L 8691240 8691293 22 101 3.0 3.0 3.0 5.5 155 chr3L 8691138 intergenic not near genes chr3L 8691216 intergenic not near genes chr3L 8691293 intergenic not near genes chr3L_22_8690001 chr3L_8690001 RAL-892 1308 chr3L 8697271 8697287 chr3L 8697371 8697387 8 100 8.5 5.0 6.8 1.0 116 chr3L 8697271 intergenic not near genes chr3L 8697329 intergenic not near genes chr3L 8697387 intergenic not near genes chr3L_8_8695001 chr3L_8695001 RAL-892 1309 chr3L 8699652 8699701 chr3L 8699754 8699781 7 92 4.0 2.0 3.0 1.8 129 chr3L 8699652 intergenic not near genes chr3L 8699716 intergenic not near genes chr3L 8699781 intergenic not near genes chr3L_7_8695001 chr3L_8695001 RAL-892 1310 chr3L 8773613 8773642 chr3L 8773724 8773753 7 109 7.0 8.5 7.8 0.8 140 chr3L 8773613 intron Fhos + chr3L 8773683 intron Fhos + chr3L 8773753 intron Fhos + chr3L_7_8770001 chr3L_8770001 RAL-892 1311 chr3L 8773995 8774022 chr3L 8774148 8774175 15 153 5.5 7.5 6.5 2.0 180 chr3L 8773995 intron Fhos + chr3L 8774085 intron Fhos + chr3L 8774175 intron Fhos + chr3L_15_8770001 chr3L_8770001 RAL-892 1312 chr3L 8791259 8791309 chr3L 8796699 8796748 I-element 10 5435 3.0 0.0 1.5 4.0 5489 chr3L 8791259 exon Fhos + chr3L 8794004 intron Fhos + chr3L 8796748 intron Fhos + chr3L_10_8790001 chr3L_8790001 RAL-892 1313 chr3L 8819069 8819077 chr3L 8819219 8819230 4 153 2.0 5.5 3.8 0.8 161 chr3L 8819069 intergenic not near genes chr3L 8819150 intergenic not near genes chr3L 8819230 intergenic not near genes chr3L_4_8815001 chr3L_8815001 RAL-892 1314 chr3L 8839727 8839744 chr3L 8839817 8839844 7 98 5.0 2.5 3.8 1.5 117 chr3L 8839727 intron dally + chr3L 8839786 intron dally + chr3L 8839844 intron dally + chr3L_7_8835001 chr3L_8835001 RAL-892 1315 chr3L 8869566 8869587 chr3L 8869683 8869703 5 116 5.5 7.5 6.5 0.7 137 chr3L 8869566 intron dally + chr3L 8869634 intron dally + chr3L 8869703 intron dally + chr3L_5_8865001 chr3L_8865001 RAL-892 1316 chr3L 8924424 8924460 chr3L 8924521 8924535 7 94 3.5 6.0 4.8 1.2 111 chr3L 8924424 intron Tsp66E + chr3L 8924480 intron Tsp66E + chr3L 8924535 intron Tsp66E + chr3L_7_8920001 chr3L_8920001 RAL-892 1317 chr3L 8928248 8928295 chr3L 8928344 8928391 9 95 1.5 3.5 2.5 2.6 143 chr3L 8928248 intron Tsp66E + chr3L 8928320 intron Tsp66E + chr3L 8928391 intron Tsp66E + chr3L_9_8925001 chr3L_8925001 RAL-892 1318 chr3L 8982218 8982256 chr3L 8982463 8982501 15 245 5.0 4.0 4.5 2.7 283 chr3L 8982218 intron,3` UTR CG13314 +,Galk - chr3L 8982360 intron,3` UTR CG13314 +,Galk - chr3L 8982501 intron,3` UTR CG13314 +,Galk - chr3L_15_8980001 chr3L_8980001 RAL-892 1319 chr3L 9003139 9003151 chr3L 9003239 9003251 7 100 4.0 6.5 5.2 1.1 112 chr3L 9003139 intergenic not near genes chr3L 9003195 intergenic not near genes chr3L 9003251 intergenic not near genes chr3L_7_9000001 chr3L_9000001 RAL-892 1320 chr3L 9047064 9047080 chr3L 9047170 9047186 4 106 1.5 0.0 0.8 2.2 122 chr3L 9047064 intergenic CG5144 + chr3L 9047125 intergenic CG5144 + chr3L 9047186 intergenic CG5144 + chr3L_4_9045001 chr3L_9045001 RAL-892 1321 chr3L 9076916 9076955 chr3L 9084485 9084525 412 13 7576 5.5 4.5 5.0 2.2 7609 chr3L 9076916 exon Tequila + chr3L 9080720 intron Tequila + chr3L 9084525 exon Tequila + chr3L_13_9080001 chr3L_9080001 RAL-892 1322 chr3L 7750128 7750132 chr3L 9107470 9107474 4 1357342 24.5 0.0 12.2 0.3 1357346 chr3L 7750128 intron,3` UTR CG32373 +,CG13685 + chr3L 8428801 intron Cbl + chr3L 9107474 intron bol - chr3L_4_8425001 chr3L_8425001 RAL-892 1323 chr3L 9111131 9111176 chr3L 9111226 9111268 7 95 3.5 2.0 2.8 1.8 137 chr3L 9111131 intron bol - chr3L 9111200 intron bol - chr3L 9111268 intron bol - chr3L_7_9110001 chr3L_9110001 RAL-892 1324 chr3L 9125789 9125798 chr3L 9125886 9125895 4 97 4.0 6.0 5.0 0.7 106 chr3L 9125789 intron bol - chr3L 9125842 intron bol - chr3L 9125895 intron bol - chr3L_4_9125001 chr3L_9125001 RAL-892 1325 chr3L 9130549 9130572 chr3L 9134317 9134351 412 5 3775 7.0 1.5 4.2 1.0 3802 chr3L 9130549 intergenic bol - chr3L 9132450 intergenic not near genes chr3L 9134351 intergenic Dhpr + chr3L_5_9130001 chr3L_9130001 RAL-892 1326 chr3L 9164681 9164702 chr3L 9166168 9166189 hobo 10 1486 5.5 0.5 3.0 2.5 1508 chr3L 9164681 intron Rdl - chr3L 9165435 intron Rdl - chr3L 9166189 intron Rdl - chr3L_10_9165001 chr3L_9165001 RAL-892 1327 chr3L 9164703 9164724 chr3L 9166162 9166196 hobo 8 1479 3.5 0.5 2.0 2.7 1493 chr3L 9164703 intron Rdl - chr3L 9165450 intron Rdl - chr3L 9166196 intron Rdl - chr3L_8_9165001 chr3L_9165001 RAL-892 1328 chr3L 9172263 9172294 chr3L 9172358 9172397 4 95 4.5 2.0 3.2 1.0 134 chr3L 9172263 intron Rdl - chr3L 9172330 intron Rdl - chr3L 9172397 intron Rdl - chr3L_4_9170001 chr3L_9170001 RAL-892 1329 chr3L 9314048 9314062 chr3L 9314146 9314160 4 98 0.0 2.0 1.0 2.0 112 chr3L 9314048 intergenic not near genes chr3L 9314104 intergenic not near genes chr3L 9314160 intergenic not near genes chr3L_4_9310001 chr3L_9310001 RAL-892 1330 chr3L 9389405 9389420 chr3L 9389534 9389549 7 128 8.0 3.5 5.8 1.0 144 chr3L 9389405 intron CG4080 - chr3L 9389477 intron CG4080 - chr3L 9389549 intron CG4080 - chr3L_7_9385001 chr3L_9385001 RAL-892 1331 chr3L 9390832 9390870 chr3L 9390982 9391020 17 148 2.0 5.5 3.8 3.5 188 chr3L 9390832 intron CG4080 - chr3L 9390926 intron CG4080 - chr3L 9391020 intron CG4080 - chr3L_17_9390001 chr3L_9390001 RAL-892 1332 chr3L 9392107 9392120 chr3L 9392205 9392218 5 96 6.0 0.0 3.0 1.2 111 chr3L 9392107 intron CG4080 - chr3L 9392162 intron CG4080 - chr3L 9392218 intron CG4080 - chr3L_5_9390001 chr3L_9390001 RAL-892 1333 chr3L 9443492 9443539 chr3L 9445299 9445346 S-element 10 1806 4.5 4.5 4.5 1.8 1854 chr3L 9443492 intron CG33926 + chr3L 9444419 intron CG33926 + chr3L 9445346 intron CG33926 + chr3L_10_9440001 chr3L_9440001 RAL-892 1334 chr3L 9501686 9501709 chr3L 9502192 9502215 roo 7 506 9.0 0.0 4.5 1.3 529 chr3L 9501686 intron path - chr3L 9501950 intron path - chr3L 9502215 intron path - chr3L_7_9500001 chr3L_9500001 RAL-892 1335 chr3L 9510893 9510911 chr3L 9511005 9511024 4 110 3.0 1.0 2.0 1.3 131 chr3L 9510893 intron RpS9 - chr3L 9510958 intron RpS9 - chr3L 9511024 intron RpS9 - chr3L_4_9510001 chr3L_9510001 RAL-892 1336 chr3L 9510915 9510954 chr3L 9511004 9511052 6 101 0.0 0.5 0.2 5.0 137 chr3L 9510915 intron RpS9 - chr3L 9510984 intron RpS9 - chr3L 9511052 intron RpS9 - chr3L_6_9510001 chr3L_9510001 RAL-892 1337 chr3L 9513433 9513450 chr3L 9513540 9513557 6 107 7.0 4.5 5.8 0.9 124 chr3L 9513433 intergenic CG33702 - chr3L 9513495 intergenic CG33702 - chr3L 9513557 intergenic CG33702 - chr3L_6_9510001 chr3L_9510001 RAL-892 1338 chr3L 9513454 9513474 chr3L 9513537 9513581 10 104 2.5 4.5 3.5 2.2 127 chr3L 9513454 intergenic CG33702 - chr3L 9513518 intergenic CG33702 - chr3L 9513581 intergenic CG33702 - chr3L_10_9510001 chr3L_9510001 RAL-892 1339 chr3L 9526470 9526514 chr3L 9528170 9528214 Doc 22 1699 4.5 5.0 4.8 3.8 1744 chr3L 9526470 intergenic not near genes chr3L 9527342 intergenic not near genes chr3L 9528214 intergenic not near genes chr3L_22_9525001 chr3L_9525001 RAL-892 1340 chr3L 9559986 9560013 chr3L 9560087 9560114 7 101 0.0 8.5 4.2 1.3 128 chr3L 9559986 intron CG42673 + chr3L 9560050 intron CG42673 + chr3L 9560114 intron CG42673 + chr3L_7_9560001 chr3L_9560001 RAL-892 1341 chr3L 9571881 9571931 chr3L 9572248 9572299 jockey 20 368 6.5 5.0 5.8 2.9 418 chr3L 9571881 intron CG42673 + chr3L 9572090 intron CG42673 + chr3L 9572299 intron CG42673 + chr3L_20_9570001 chr3L_9570001 RAL-892 1342 chr3L 9575902 9575936 chr3L 9580985 9581035 jockey 6 5089 6.5 3.5 5.0 1.0 5133 chr3L 9575902 intron CG42673 + chr3L 9578468 intron CG42673 + chr3L 9581035 intron CG42673 + chr3L_6_9575001 chr3L_9575001 RAL-892 1343 chr3L 9597503 9597529 chr3L 9598209 9598250 7 712 19.5 18.0 18.8 0.4 747 chr3L 9597503 intergenic CG14177 + chr3L 9597876 exon CG14177 + chr3L 9598250 intergenic CG14177 + chr3L_7_9595001 chr3L_9595001 RAL-892 1344 chr3L 9637836 9637887 chr3L 9637938 9637989 16 102 1.0 1.5 1.2 7.3 153 chr3L 9637836 intron fry - chr3L 9637912 intron fry - chr3L 9637989 intron fry - chr3L_16_9635001 chr3L_9635001 RAL-892 1345 chr3L 9639038 9639062 chr3L 9639143 9639167 12 105 0.0 10.0 5.0 2.0 129 chr3L 9639038 intron fry - chr3L 9639102 intron fry - chr3L 9639167 intron fry - chr3L_12_9635001 chr3L_9635001 RAL-892 1346 chr3L 9645739 9645788 chr3L 9645930 9645979 15 190 4.0 0.5 2.2 4.7 240 chr3L 9645739 intron,intron fry -,CG33696 + chr3L 9645859 intron,intron fry -,CG33696 + chr3L 9645979 intron,intron fry -,CG33696 + chr3L_15_9645001 chr3L_9645001 RAL-892 1347 chr3L 9831686 9831738 chr3L 9831787 9831839 12 101 0.0 2.0 1.0 6.0 153 chr3L 9831686 intron CG43897 + chr3L 9831762 intron CG43897 + chr3L 9831839 intron CG43897 + chr3L_12_9830001 chr3L_9830001 RAL-892 1348 chr3L 9929656 9929673 chr3L 9938455 9938472 roo 5 8799 5.5 2.0 3.8 1.0 8816 chr3L 9929656 intron CG34356 + chr3L 9934064 intron CG34356 + chr3L 9938472 intron CG34356 + chr3L_5_9930001 chr3L_9930001 RAL-892 1349 chr3L 9929674 9929698 chr3L 9938453 9938482 roo 8 8792 4.5 2.0 3.2 1.9 8808 chr3L 9929674 intron CG34356 + chr3L 9934078 intron CG34356 + chr3L 9938482 intron CG34356 + chr3L_8_9930001 chr3L_9930001 RAL-892 1350 chr3L 10003138 10003180 chr3L 10003255 10003297 14 117 4.0 3.0 3.5 3.1 159 chr3L 10003138 intron dpr6 + chr3L 10003218 intron dpr6 + chr3L 10003297 intron dpr6 + chr3L_14_10000001 chr3L_10000001 RAL-892 1351 chr3L 10004072 10004114 chr3L 10004172 10004214 8 100 0.5 1.5 1.0 4.0 142 chr3L 10004072 exon dpr6 + chr3L 10004143 intron dpr6 + chr3L 10004214 intron dpr6 + chr3L_8_10000001 chr3L_10000001 RAL-892 1352 chr3L 10007171 10007206 chr3L 10007294 10007329 8 123 3.5 4.0 3.8 1.7 158 chr3L 10007171 intron dpr6 + chr3L 10007250 intron dpr6 + chr3L 10007329 intron dpr6 + chr3L_8_10005001 chr3L_10005001 RAL-892 1353 chr3L 10049528 10049572 chr3L 10049628 10049672 14 100 3.5 5.5 4.5 2.5 144 chr3L 10049528 intron dpr6 + chr3L 10049600 intron dpr6 + chr3L 10049672 intron dpr6 + chr3L_14_10045001 chr3L_10045001 RAL-892 1354 chr3L 10060094 10060103 chr3L 10067693 10067702 17.6 4 7599 6.5 4.5 5.5 0.6 7608 chr3L 10060094 intron dpr6 + chr3L 10063898 intron dpr6 + chr3L 10067702 intron dpr6 + chr3L_4_10060001 chr3L_10060001 RAL-892 1355 chr3L 10145043 10145078 chr3L 10145232 10145266 8 187 1.5 3.5 2.5 2.3 223 chr3L 10145043 intergenic not near genes chr3L 10145154 intergenic not near genes chr3L 10145266 intergenic not near genes chr3L_8_10145001 chr3L_10145001 RAL-892 1356 chr3L 10182251 10182263 chr3L 10182347 10182370 4 102 5.5 6.0 5.8 0.6 119 chr3L 10182251 exon dpr10 - chr3L 10182310 5` UTR dpr10 - chr3L 10182370 5` UTR dpr10 - chr3L_4_10180001 chr3L_10180001 RAL-892 1357 chr3L 10182264 10182279 chr3L 10182335 10182386 7 98 3.5 4.0 3.8 1.5 122 chr3L 10182264 exon dpr10 - chr3L 10182325 5` UTR dpr10 - chr3L 10182386 5` UTR dpr10 - chr3L_7_10180001 chr3L_10180001 RAL-892 1358 chr3L 10298650 10298701 chr3L 10298757 10298808 20 107 0.0 1.5 0.8 11.1 158 chr3L 10298650 intergenic not near genes chr3L 10298729 intergenic not near genes chr3L 10298808 intergenic not near genes chr3L_20_10295001 chr3L_10295001 RAL-892 1359 chr3L 10300035 10300051 chr3L 10300147 10300163 4 112 4.5 4.0 4.2 0.8 128 chr3L 10300035 intergenic not near genes chr3L 10300099 intergenic not near genes chr3L 10300163 intergenic not near genes chr3L_4_10300001 chr3L_10300001 RAL-892 1360 chr3L 10308724 10308760 chr3L 10308821 10308841 10 94 3.5 6.5 5.0 1.7 117 chr3L 10308724 intergenic not near genes chr3L 10308782 intergenic not near genes chr3L 10308841 intergenic not near genes chr3L_10_10305001 chr3L_10305001 RAL-892 1361 chr3L 10326262 10326300 chr3L 10326362 10326400 11 100 0.0 5.0 2.5 3.1 138 chr3L 10326262 intergenic CR45244 + chr3L 10326331 intergenic CR45244 + chr3L 10326400 intergenic CR45244 + chr3L_11_10325001 chr3L_10325001 RAL-892 1362 chr3L 10328096 10328129 chr3L 10328228 10328261 10 132 8.0 6.5 7.2 1.2 165 chr3L 10328096 intergenic not near genes chr3L 10328178 intergenic not near genes chr3L 10328261 intergenic not near genes chr3L_10_10325001 chr3L_10325001 RAL-892 1363 chr3L 10348637 10348672 chr3L 10348774 10348809 13 136 2.0 0.0 1.0 6.5 172 chr3L 10348637 intron CR44327 + chr3L 10348723 intron CR44327 + chr3L 10348809 intron CR44327 + chr3L_13_10345001 chr3L_10345001 RAL-892 1364 chr3L 10414933 10414968 chr3L 10417325 10417360 Doc 15 2391 4.0 6.0 5.0 2.5 2427 chr3L 10414933 intergenic CG12362 + chr3L 10416146 intergenic not near genes chr3L 10417360 intergenic not near genes chr3L_15_10415001 chr3L_10415001 RAL-892 1365 chr3L 10469913 10469965 chr3L 10470009 10470061 12 96 3.5 1.0 2.2 3.8 148 chr3L 10469913 intergenic not near genes chr3L 10469987 intergenic not near genes chr3L 10470061 intergenic not near genes chr3L_12_10465001 chr3L_10465001 RAL-892 1366 chr3L 10537209 10537254 chr3L 10537305 10537350 15 96 1.0 4.0 2.5 4.3 141 chr3L 10537209 intron A2bp1 + chr3L 10537280 intron A2bp1 + chr3L 10537350 intron A2bp1 + chr3L_15_10535001 chr3L_10535001 RAL-892 1367 chr3L 10600467 10600476 chr3L 10600569 10600578 4 102 4.5 2.0 3.2 1.0 111 chr3L 10600467 intergenic not near genes chr3L 10600522 intergenic not near genes chr3L 10600578 intergenic not near genes chr3L_4_10600001 chr3L_10600001 RAL-892 1368 chr3L 10621833 10621877 chr3L 10621940 10621984 9 106 1.5 4.0 2.8 2.4 151 chr3L 10621833 intergenic not near genes chr3L 10621908 intergenic not near genes chr3L 10621984 intergenic not near genes chr3L_9_10620001 chr3L_10620001 RAL-892 1369 chr3L 10658057 10658108 chr3L 10658154 10658205 15 97 0.5 6.5 3.5 3.3 148 chr3L 10658057 intron CG32066 - chr3L 10658131 intron CG32066 - chr3L 10658205 intron CG32066 - chr3L_15_10655001 chr3L_10655001 RAL-892 1370 chr3L 10694902 10694932 chr3L 10695014 10695044 12 112 0.5 3.5 2.0 4.0 142 chr3L 10694902 intron NijA - chr3L 10694973 intron NijA - chr3L 10695044 exon NijA - chr3L_12_10690001 chr3L_10690001 RAL-892 1371 chr3L 10700172 10700192 chr3L 10700273 10700293 6 101 5.0 4.5 4.8 1.0 121 chr3L 10700172 intergenic not near genes chr3L 10700232 intergenic not near genes chr3L 10700293 intergenic not near genes chr3L_6_10700001 chr3L_10700001 RAL-892 1372 chr3L 10732252 10732293 chr3L 10732413 10732455 8 162 4.0 4.5 4.2 1.5 203 chr3L 10732252 intergenic not near genes chr3L 10732354 intergenic not near genes chr3L 10732455 intergenic not near genes chr3L_8_10730001 chr3L_10730001 RAL-892 1373 chr3L 10735816 10735833 chr3L 10735925 10735942 9 109 2.5 5.5 4.0 1.8 126 chr3L 10735816 intergenic not near genes chr3L 10735879 intergenic not near genes chr3L 10735942 intergenic not near genes chr3L_9_10735001 chr3L_10735001 RAL-892 1374 chr3L 10762816 10762829 chr3L 10762920 10762933 6 104 9.5 4.5 7.0 0.8 117 chr3L 10762816 intergenic not near genes chr3L 10762874 intergenic not near genes chr3L 10762933 intergenic not near genes chr3L_6_10760001 chr3L_10760001 RAL-892 1375 chr3L 10795046 10795071 chr3L 10795146 10795171 10 100 4.0 0.0 2.0 3.3 125 chr3L 10795046 5` UTR CR44546 + chr3L 10795108 5` UTR CR44546 + chr3L 10795171 5` UTR CR44546 + chr3L_10_10795001 chr3L_10795001 RAL-892 1376 chr3L 10887361 10887379 chr3L 10887460 10887478 8 98 1.0 10.5 5.8 1.2 117 chr3L 10887361 intergenic not near genes chr3L 10887420 intergenic not near genes chr3L 10887478 intergenic not near genes chr3L_8_10885001 chr3L_10885001 RAL-892 1377 chr3L 10942056 10942069 chr3L 10942141 10942165 5 93 3.5 7.0 5.2 0.8 109 chr3L 10942056 intergenic not near genes chr3L 10942110 intergenic not near genes chr3L 10942165 intergenic not near genes chr3L_5_10940001 chr3L_10940001 RAL-892 1378 chr3L 10956431 10956468 chr3L 10956569 10956606 4 137 3.5 1.0 2.2 1.2 175 chr3L 10956431 intergenic not near genes chr3L 10956518 intergenic not near genes chr3L 10956606 intergenic not near genes chr3L_4_10955001 chr3L_10955001 RAL-892 1379 chr3L 10958189 10958232 chr3L 10958291 10958334 10 99 4.5 1.0 2.8 2.6 145 chr3L 10958189 intergenic not near genes chr3L 10958262 intergenic not near genes chr3L 10958334 intergenic not near genes chr3L_10_10955001 chr3L_10955001 RAL-892 1380 chr3L 11018543 11018575 chr3L 11018649 11018681 11 106 2.5 2.5 2.5 3.1 138 chr3L 11018543 intergenic not near genes chr3L 11018612 intergenic not near genes chr3L 11018681 intergenic not near genes chr3L_11_11015001 chr3L_11015001 RAL-892 1381 chr3L 11042103 11042152 chr3L 11042262 11042311 11 159 2.0 0.0 1.0 5.5 208 chr3L 11042103 intron CG43693 - chr3L 11042207 intron CG43693 - chr3L 11042311 intron CG43693 - chr3L_11_11040001 chr3L_11040001 RAL-892 1382 chr3L 11083488 11083538 chr3L 11083606 11083656 21 118 5.0 4.5 4.8 3.6 168 chr3L 11083488 intron JIL-1 - chr3L 11083572 intron JIL-1 - chr3L 11083656 intron JIL-1 - chr3L_21_11080001 chr3L_11080001 RAL-892 1383 chr3L 11087047 11087089 chr3L 11088846 11088898 S-element 9 1807 2.5 2.0 2.2 2.8 1851 chr3L 11087047 intron JIL-1 - chr3L 11087972 intron JIL-1 - chr3L 11088898 intron JIL-1 - chr3L_9_11085001 chr3L_11085001 RAL-892 1384 chr3L 11105282 11105315 chr3L 11107002 11107022 X-element 9 1727 9.0 2.0 5.5 1.4 1740 chr3L 11105282 intergenic not near genes chr3L 11106152 intergenic not near genes chr3L 11107022 3` UTR CG32073 - chr3L_9_11105001 chr3L_11105001 RAL-892 1385 chr3L 11127190 11127289 chr3L 11127287 11127381 4 96 0.0 0.0 0.0 4.0 191 chr3L 11127190 intron CG42575 + chr3L 11127286 intron CG42575 + chr3L 11127381 intron CG42575 + chr3L_4_11125001 chr3L_11125001 RAL-892 1386 chr3L 11127907 11127958 chr3L 11128029 11128081 20 123 4.0 3.0 3.5 4.4 174 chr3L 11127907 intron CG42575 + chr3L 11127994 intron CG42575 + chr3L 11128081 intron CG42575 + chr3L_20_11125001 chr3L_11125001 RAL-892 1387 chr3L 11135515 11135530 chr3L 11135765 11135780 4 250 1.0 1.5 1.2 1.8 265 chr3L 11135515 intergenic CG14143 + chr3L 11135648 intergenic CG14143 +,CG32082 + chr3L 11135780 intergenic CG32082 +,CG14143 + chr3L_4_11135001 chr3L_11135001 RAL-892 1388 chr3L 11145542 11145557 chr3L 11145632 11145667 8 108 0.0 1.5 0.8 4.4 125 chr3L 11145542 intron CG32082 + chr3L 11145604 intron CG32082 + chr3L 11145667 intron CG32082 + chr3L_8_11145001 chr3L_11145001 RAL-892 1389 chr3L 11186256 11186289 chr3L 11186350 11186388 8 97 5.0 5.0 5.0 1.3 132 chr3L 11186256 intron GlcAT-P - chr3L 11186322 intron GlcAT-P - chr3L 11186388 intron GlcAT-P - chr3L_8_11185001 chr3L_11185001 RAL-892 1390 chr3L 11241760 11241792 chr3L 11241862 11241894 12 102 3.5 1.0 2.2 3.8 134 chr3L 11241760 intergenic not near genes chr3L 11241827 intergenic not near genes chr3L 11241894 intergenic not near genes chr3L_12_11240001 chr3L_11240001 RAL-892 1391 chr3L 11249842 11249891 chr3L 11249945 11249994 10 103 4.0 3.0 3.5 2.2 152 chr3L 11249842 5` UTR CR44717 + chr3L 11249918 5` UTR CR44717 + chr3L 11249994 5` UTR CR44717 + chr3L_10_11245001 chr3L_11245001 RAL-892 1392 chr3L 11264447 11264497 chr3L 11271419 11271460 17.6 17 6968 2.5 4.5 3.5 3.8 7013 chr3L 11264447 intergenic not near genes chr3L 11267954 intergenic not near genes chr3L 11271460 intergenic not near genes chr3L_17_11265001 chr3L_11265001 RAL-892 1393 chr3L 11321779 11321808 chr3L 11321979 11322008 4 200 0.0 4.0 2.0 1.3 229 chr3L 11321779 intergenic CG6168 - chr3L 11321894 intergenic CG6168 - chr3L 11322008 intergenic CG6168 - chr3L_4_11320001 chr3L_11320001 RAL-892 1394 chr3L 11329703 11329727 chr3L 11332896 11332913 jockey 6 3201 4.0 3.0 3.5 1.3 3210 chr3L 11329703 intergenic not near genes chr3L 11331308 intergenic not near genes chr3L 11332913 intergenic not near genes chr3L_6_11330001 chr3L_11330001 RAL-892 1395 chr3L 11376704 11376736 chr3L 11376791 11376818 8 97 2.0 4.5 3.2 1.9 114 chr3L 11376704 intergenic not near genes chr3L 11376761 intergenic not near genes chr3L 11376818 intergenic not near genes chr3L_8_11375001 chr3L_11375001 RAL-892 1396 chr3L 11426727 11426773 chr3L 11427088 11427139 17 365 5.5 4.5 5.0 2.8 412 chr3L 11426727 intergenic CG7560 + chr3L 11426933 intergenic not near genes chr3L 11427139 intergenic not near genes chr3L_17_11425001 chr3L_11425001 RAL-892 1397 chr3L 11453641 11453663 chr3L 11453719 11453721 5 66 6.0 1.5 3.8 1.0 80 chr3L 11453641 intergenic not near genes chr3L 11453681 intergenic not near genes chr3L 11453721 intergenic not near genes chr3L_5_11450001 chr3L_11450001 RAL-892 1398 chr3L 11475621 11475641 chr3L 11475717 11475752 5 108 0.5 4.0 2.2 1.6 131 chr3L 11475621 intergenic Vha16-2 + chr3L 11475686 intergenic Vha16-2 + chr3L 11475752 intergenic Vha16-2 + chr3L_5_11475001 chr3L_11475001 RAL-892 1399 chr3L 11493139 11493186 chr3L 11493254 11493299 12 115 0.5 6.0 3.2 2.9 160 chr3L 11493139 intron chrb + chr3L 11493219 intron chrb + chr3L 11493299 intron chrb + chr3L_12_11490001 chr3L_11490001 RAL-892 1400 chr3L 11678074 11678125 chr3L 11678181 11678232 15 107 1.5 4.5 3.0 3.8 158 chr3L 11678074 intron CG32085 - chr3L 11678153 intron CG32085 - chr3L 11678232 intron CG32085 - chr3L_15_11675001 chr3L_11675001 RAL-892 1401 chr3L 11723067 11723111 chr3L 11727882 11727919 Doc 10 4814 3.5 5.5 4.5 1.8 4852 chr3L 11723067 3` UTR Bmcp + chr3L 11725493 intron Bmcp + chr3L 11727919 3` UTR Bmcp + chr3L_10_11725001 chr3L_11725001 RAL-892 1402 chr3L 7749471 7749472 chr3L 11777678 11777678 5 4028207 17.0 9.0 13.0 0.4 4028207 chr3L 7749471 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_5_9760001 chr3L_9760001 RAL-892 1403 chr3L 11777678 11777678 chr3L 12163305 12163305 5 385627 9.0 9.5 9.2 0.5 385627 chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L 11970492 exon Muc68E - chr3L 12163305 intron CG9760 - chr3L_5_11970001 chr3L_11970001 RAL-892 1404 chr3L 11826534 11826589 chr3L 11826662 11826706 11 123 5.0 2.0 3.5 2.4 172 chr3L 11826534 intergenic CycA - chr3L 11826620 intergenic CycA - chr3L 11826706 intergenic CycA - chr3L_11_11825001 chr3L_11825001 RAL-892 1405 chr3L 11846363 11846414 chr3L 11846480 11846540 9 124 0.5 0.0 0.2 7.5 177 chr3L 11846363 intergenic not near genes chr3L 11846452 intergenic not near genes chr3L 11846540 intergenic not near genes chr3L_9_11845001 chr3L_11845001 RAL-892 1406 chr3L 11847123 11847170 chr3L 11847233 11847280 9 110 3.0 0.0 1.5 3.6 157 chr3L 11847123 intergenic CG12521 - chr3L 11847202 intergenic CG12521 - chr3L 11847280 intergenic CG12521 - chr3L_9_11845001 chr3L_11845001 RAL-892 1407 chr3L 11849321 11849347 chr3L 11849441 11849467 7 119 3.5 5.0 4.2 1.3 146 chr3L 11849321 intergenic not near genes chr3L 11849394 intergenic not near genes chr3L 11849467 intergenic not near genes chr3L_7_11845001 chr3L_11845001 RAL-892 1408 chr3L 11850135 11850161 chr3L 11850249 11850276 14 114 3.5 0.0 1.8 5.0 141 chr3L 11850135 intergenic not near genes chr3L 11850206 intergenic CG44837 - chr3L 11850276 intergenic CG44837 - chr3L_14_11850001 chr3L_11850001 RAL-892 1409 chr3L 11864543 11864584 chr3L 11865849 11865899 pogo 17 1311 1.0 6.0 3.5 3.8 1356 chr3L 11864543 intron CG44837 - chr3L 11865221 intron CG44837 - chr3L 11865899 intron CG44837 - chr3L_17_11865001 chr3L_11865001 RAL-892 1410 chr3L 11913123 11913159 chr3L 11913495 11913537 16 375 8.0 4.5 6.2 2.2 414 chr3L 11913123 intron CG44837 - chr3L 11913330 intron CG44837 - chr3L 11913537 intron CG44837 - chr3L_16_11910001 chr3L_11910001 RAL-892 1411 chr3L 11943474 11943514 chr3L 11943595 11943635 10 121 3.5 4.5 4.0 2.0 161 chr3L 11943474 3` UTR Rpt4R + chr3L 11943554 intergenic Rpt4R +,CG5883 - chr3L 11943635 intergenic CG5883 -,Rpt4R + chr3L_10_11940001 chr3L_11940001 RAL-892 1412 chr3L 12013893 12013935 chr3L 12014002 12014046 16 111 4.5 2.5 3.5 3.6 153 chr3L 12013893 intron rols - chr3L 12013970 intron rols - chr3L 12014046 intron rols - chr3L_16_12010001 chr3L_12010001 RAL-892 1413 chr3L 12039611 12039652 chr3L 12039721 12039762 15 109 5.5 0.0 2.8 3.9 151 chr3L 12039611 intron rols - chr3L 12039686 intron rols - chr3L 12039762 intron rols - chr3L_15_12035001 chr3L_12035001 RAL-892 1414 chr3L 12050815 12050819 chr3L 12050926 12050927 5 110 0.0 9.5 4.8 0.9 112 chr3L 12050815 intron rols - chr3L 12050871 intron rols - chr3L 12050927 intron rols - chr3L_5_12050001 chr3L_12050001 RAL-892 1415 chr3L 12052684 12052731 chr3L 12052793 12052840 18 109 7.0 3.5 5.2 2.9 156 chr3L 12052684 intron rols - chr3L 12052762 intron rols - chr3L 12052840 intron rols - chr3L_18_12050001 chr3L_12050001 RAL-892 1416 chr3L 12092379 12092421 chr3L 12092476 12092518 14 97 1.5 2.5 2.0 4.7 139 chr3L 12092379 intergenic not near genes chr3L 12092448 intergenic not near genes chr3L 12092518 intergenic not near genes chr3L_14_12090001 chr3L_12090001 RAL-892 1417 chr3L 12106689 12106728 chr3L 12106898 12106940 9 206 2.5 4.5 3.5 2.0 251 chr3L 12106689 intergenic not near genes chr3L 12106814 intergenic not near genes chr3L 12106940 intergenic not near genes chr3L_9_12105001 chr3L_12105001 RAL-892 1418 chr3L 12170771 12170822 chr3L 12170873 12170924 13 102 1.0 2.5 1.8 4.6 153 chr3L 12170771 intron Rh7 - chr3L 12170848 intron Rh7 - chr3L 12170924 intron Rh7 - chr3L_13_12170001 chr3L_12170001 RAL-892 1419 chr3L 12273078 12273123 chr3L 12273404 12273442 8 304 1.5 1.0 1.2 3.6 364 chr3L 12273078 intron CG4300 - chr3L 12273260 intron CG4300 - chr3L 12273442 intron CG4300 - chr3L_8_12270001 chr3L_12270001 RAL-892 1420 chr3L 12317399 12317439 chr3L 12317520 12317552 7 119 6.0 1.0 3.5 1.6 153 chr3L 12317399 intergenic not near genes chr3L 12317476 intergenic not near genes chr3L 12317552 intergenic not near genes chr3L_7_12315001 chr3L_12315001 RAL-892 1421 chr3L 12362580 12362628 chr3L 12362730 12362769 7 140 1.0 6.5 3.8 1.5 189 chr3L 12362580 intergenic not near genes chr3L 12362674 intergenic not near genes chr3L 12362769 intergenic not near genes chr3L_7_12360001 chr3L_12360001 RAL-892 1422 chr3L 12369524 12369565 chr3L 12369629 12369675 22 110 4.5 3.5 4.0 4.4 151 chr3L 12369524 intron Ncc69 - chr3L 12369600 intron Ncc69 - chr3L 12369675 intron Ncc69 - chr3L_22_12365001 chr3L_12365001 RAL-892 1423 chr3L 12381523 12381547 chr3L 12381621 12381645 7 98 0.0 0.5 0.2 5.8 122 chr3L 12381523 intron Ncc69 - chr3L 12381584 intron Ncc69 - chr3L 12381645 intron Ncc69 - chr3L_7_12380001 chr3L_12380001 RAL-892 1424 chr3L 12434894 12434917 chr3L 12435062 12435106 8 184 3.0 4.0 3.5 1.8 212 chr3L 12434894 intergenic not near genes chr3L 12435000 intergenic not near genes chr3L 12435106 intergenic not near genes chr3L_8_12430001 chr3L_12430001 RAL-892 1425 chr3L 12460313 12460339 chr3L 12460410 12460436 13 97 0.0 7.5 3.8 2.7 123 chr3L 12460313 intergenic not near genes chr3L 12460374 intergenic not near genes chr3L 12460436 intergenic not near genes chr3L_13_12460001 chr3L_12460001 RAL-892 1426 chr3L 12541512 12541519 chr3L 12541616 12541623 8 104 0.0 0.0 0.0 8.0 111 chr3L 12541512 intron sowah - chr3L 12541568 intron sowah - chr3L 12541623 intron sowah - chr3L_8_12540001 chr3L_12540001 RAL-892 1427 chr3L 12578029 12578082 chr3L 12578137 12578190 9 108 1.5 0.0 0.8 5.0 161 chr3L 12578029 intergenic not near genes chr3L 12578110 intergenic not near genes chr3L 12578190 intergenic not near genes chr3L_9_12575001 chr3L_12575001 RAL-892 1428 chr3L 12626137 12626165 chr3L 12626266 12626294 6 125 2.0 4.0 3.0 1.5 157 chr3L 12626137 intergenic not near genes chr3L 12626216 intergenic not near genes chr3L 12626294 intergenic not near genes chr3L_6_12625001 chr3L_12625001 RAL-892 1429 chr3L 12706624 12706652 chr3L 12706771 12706799 14 147 4.0 5.5 4.8 2.4 175 chr3L 12706624 intron mirr + chr3L 12706712 intron mirr + chr3L 12706799 intron mirr + chr3L_14_12705001 chr3L_12705001 RAL-892 1430 chr3L 12728015 12728039 chr3L 12728119 12728143 14 104 5.5 8.0 6.8 1.8 128 chr3L 12728015 intergenic not near genes chr3L 12728079 intergenic not near genes chr3L 12728143 intergenic not near genes chr3L_14_12725001 chr3L_12725001 RAL-892 1431 chr3L 12874916 12874955 chr3L 12877227 12877267 jockey 13 2312 2.5 3.5 3.0 3.2 2351 chr3L 12874916 intergenic not near genes chr3L 12876092 intergenic not near genes chr3L 12877267 intergenic not near genes chr3L_13_12875001 chr3L_12875001 RAL-892 1432 chr3L 12894791 12894824 chr3L 12894889 12894920 8 95 7.5 6.0 6.8 1.0 129 chr3L 12894791 intergenic CG14118 + chr3L 12894856 intergenic CG14118 + chr3L 12894920 intergenic CG14118 + chr3L_8_12890001 chr3L_12890001 RAL-892 1433 chr3L 12919263 12919286 chr3L 12924754 12924765 Rt1c 5 5484 7.5 1.5 4.5 0.9 5502 chr3L 12919263 intergenic not near genes chr3L 12922014 intergenic not near genes chr3L 12924765 intergenic not near genes chr3L_5_12920001 chr3L_12920001 RAL-892 1434 chr3L 12957771 12957815 chr3L 12962273 12962314 copia 14 4501 4.0 5.0 4.5 2.5 4543 chr3L 12957771 intergenic not near genes chr3L 12960042 intergenic not near genes chr3L 12962314 intergenic not near genes chr3L_14_12960001 chr3L_12960001 RAL-892 1435 chr3L 12978739 12978768 chr3L 12978836 12978841 8 92 8.0 0.0 4.0 1.6 102 chr3L 12978739 intergenic not near genes chr3L 12978790 intergenic not near genes chr3L 12978841 intergenic not near genes chr3L_8_12975001 chr3L_12975001 RAL-892 1436 chr3L 13008415 13008429 chr3L 13008515 13008529 5 100 7.0 6.0 6.5 0.7 114 chr3L 13008415 5` UTR CG14117 + chr3L 13008472 5` UTR CG14117 + chr3L 13008529 5` UTR CG14117 + chr3L_5_13005001 chr3L_13005001 RAL-892 1437 chr3L 13026539 13026578 chr3L 13026650 13026688 8 111 4.5 4.0 4.2 1.5 149 chr3L 13026539 intergenic Zmynd10 - chr3L 13026614 intergenic Zmynd10 - chr3L 13026688 intergenic Zmynd10 - chr3L_8_13025001 chr3L_13025001 RAL-892 1438 chr3L 13045970 13046022 chr3L 13046157 13046209 19 186 5.0 3.5 4.2 3.7 239 chr3L 13045970 intron Syx13 + chr3L 13046090 intron Syx13 + chr3L 13046209 intron Syx13 + chr3L_19_13045001 chr3L_13045001 RAL-892 1439 chr3L 13074016 13074067 chr3L 13074169 13074196 17 149 7.0 5.5 6.2 2.4 180 chr3L 13074016 intergenic not near genes chr3L 13074106 intergenic not near genes chr3L 13074196 intergenic not near genes chr3L_17_13070001 chr3L_13070001 RAL-892 1440 chr3L 13088593 13088646 chr3L 13088707 13088759 19 114 3.5 5.0 4.2 3.7 166 chr3L 13088593 3` UTR CG11251 - chr3L 13088676 3` UTR CG11251 - chr3L 13088759 3` UTR CG11251 - chr3L_19_13085001 chr3L_13085001 RAL-892 1441 chr3L 13144098 13144124 chr3L 13144195 13144218 6 96 7.0 4.5 5.8 0.9 120 chr3L 13144098 intergenic not near genes chr3L 13144158 intergenic not near genes chr3L 13144218 intergenic not near genes chr3L_6_13140001 chr3L_13140001 RAL-892 1442 chr3L 13194049 13194085 chr3L 13194148 13194184 8 99 3.5 3.5 3.5 1.8 135 chr3L 13194049 intergenic not near genes chr3L 13194116 intergenic not near genes chr3L 13194184 intergenic not near genes chr3L_8_13190001 chr3L_13190001 RAL-892 1443 chr3L 13241163 13241192 chr3L 13241270 13241299 7 107 7.0 3.0 5.0 1.2 136 chr3L 13241163 intron caps + chr3L 13241231 intron caps + chr3L 13241299 intron caps + chr3L_7_13240001 chr3L_13240001 RAL-892 1444 chr3L 13265169 13265214 chr3L 13265267 13265307 12 95 1.0 3.5 2.2 3.8 138 chr3L 13265169 intron caps + chr3L 13265238 5` UTR caps + chr3L 13265307 5` UTR caps + chr3L_12_13265001 chr3L_13265001 RAL-892 1445 chr3L 13267279 13267316 chr3L 13267397 13267449 14 127 5.5 0.0 2.8 3.7 170 chr3L 13267279 intron caps + chr3L 13267364 intron caps + chr3L 13267449 intron caps + chr3L_14_13265001 chr3L_13265001 RAL-892 1446 chr3L 13315844 13315866 chr3L 13315951 13315973 5 107 2.5 7.5 5.0 0.8 129 chr3L 13315844 intergenic not near genes chr3L 13315908 intergenic not near genes chr3L 13315973 intergenic not near genes chr3L_5_13315001 chr3L_13315001 RAL-892 1447 chr3L 13338268 13338313 chr3L 13338384 13338429 10 114 3.0 4.5 3.8 2.1 161 chr3L 13338268 intergenic not near genes chr3L 13338348 intergenic not near genes chr3L 13338429 intergenic not near genes chr3L_10_13335001 chr3L_13335001 RAL-892 1448 chr3L 13400519 13400546 chr3L 13400615 13400642 14 96 4.5 4.5 4.5 2.5 123 chr3L 13400519 intron sens - chr3L 13400580 intron sens - chr3L 13400642 intron sens - chr3L_14_13400001 chr3L_13400001 RAL-892 1449 chr3L 13457900 13457946 chr3L 13458238 13458281 12 340 4.5 2.5 3.5 2.7 381 chr3L 13457900 intron CG10738 + chr3L 13458090 intron CG10738 + chr3L 13458281 intron CG10738 + chr3L_12_13455001 chr3L_13455001 RAL-892 1450 chr3L 13477006 13477037 chr3L 13477103 13477134 10 97 0.0 2.0 1.0 5.0 128 chr3L 13477006 intergenic not near genes chr3L 13477070 intergenic stv + chr3L 13477134 intergenic stv + chr3L_10_13475001 chr3L_13475001 RAL-892 1451 chr3L 13492061 13492105 chr3L 13492156 13492201 7 92 4.5 5.0 4.8 1.2 140 chr3L 13492061 intron Tgi + chr3L 13492131 intron Tgi + chr3L 13492201 intron Tgi + chr3L_7_13490001 chr3L_13490001 RAL-892 1452 chr3L 13525140 13525188 chr3L 13532956 13532961 roo 15 7808 7.0 5.0 6.0 2.1 7821 chr3L 13525140 intergenic not near genes chr3L 13529050 intergenic not near genes chr3L 13532961 intergenic not near genes chr3L_15_13525001 chr3L_13525001 RAL-892 1453 chr3L 13574606 13574617 chr3L 13580137 13580148 Rt1c 5 5531 5.0 1.0 3.0 1.2 5542 chr3L 13574606 intron bru-3 - chr3L 13577377 intron bru-3 - chr3L 13580148 intron bru-3 - chr3L_5_13575001 chr3L_13575001 RAL-892 1454 chr3L 13629521 13629528 chr3L 13629644 13629654 4 127 5.5 6.0 5.8 0.6 133 chr3L 13629521 intron bru-3 - chr3L 13629588 intron bru-3 - chr3L 13629654 intron bru-3 - chr3L_4_13625001 chr3L_13625001 RAL-892 1455 chr3L 13641435 13641476 chr3L 13641558 13641599 9 119 5.0 2.5 3.8 1.9 164 chr3L 13641435 intron bru-3 - chr3L 13641517 intron bru-3 - chr3L 13641599 intron bru-3 - chr3L_9_13640001 chr3L_13640001 RAL-892 1456 chr3L 13644235 13644279 chr3L 13644701 13644745 17 461 4.0 1.5 2.8 4.5 510 chr3L 13644235 intron bru-3 - chr3L 13644490 intron bru-3 - chr3L 13644745 intron bru-3 - chr3L_17_13640001 chr3L_13640001 RAL-892 1457 chr3L 13714132 13714165 chr3L 13714233 13714252 8 96 2.5 4.5 3.5 1.8 120 chr3L 13714132 intron bru-3 - chr3L 13714192 intron bru-3 - chr3L 13714252 intron bru-3 - chr3L_8_13710001 chr3L_13710001 RAL-892 1458 chr3L 13804537 13804576 chr3L 13822843 13822880 roo 13 18305 3.5 9.5 6.5 1.7 18343 chr3L 13804537 intergenic not near genes chr3L 13813708 intergenic not near genes chr3L 13822880 intergenic not near genes chr3L_13_13810001 chr3L_13810001 RAL-892 1459 chr3L 13841496 13841539 chr3L 13841600 13841621 11 95 7.5 2.0 4.8 1.9 125 chr3L 13841496 exon CG8757 - chr3L 13841558 intron CG8757 - chr3L 13841621 intron CG8757 - chr3L_11_13840001 chr3L_13840001 RAL-892 1460 chr3L 13884359 13884387 chr3L 13884470 13884492 15 111 8.5 3.0 5.8 2.2 133 chr3L 13884359 intron dysc - chr3L 13884426 intron dysc - chr3L 13884492 intron dysc - chr3L_15_13880001 chr3L_13880001 RAL-892 1461 chr3L 13920399 13920433 chr3L 13920499 13920533 20 99 0.0 2.5 1.2 9.1 134 chr3L 13920399 intron Rgl - chr3L 13920466 intron Rgl - chr3L 13920533 intron Rgl - chr3L_20_13920001 chr3L_13920001 RAL-892 1462 chr3L 14061645 14061691 chr3L 14061754 14061797 8 108 4.0 1.5 2.8 2.1 152 chr3L 14061645 intron CG32138 + chr3L 14061721 intron CG32138 + chr3L 14061797 intron CG32138 + chr3L_8_14060001 chr3L_14060001 RAL-892 1463 chr3L 14141391 14141399 chr3L 14141498 14141506 5 107 3.5 0.0 1.8 1.8 115 chr3L 14141391 intergenic not near genes chr3L 14141448 intergenic not near genes chr3L 14141506 intergenic not near genes chr3L_5_14140001 chr3L_14140001 RAL-892 1464 chr3L 14175343 14175368 chr3L 14175511 14175536 10 168 3.5 5.5 4.5 1.8 193 chr3L 14175343 intergenic D - chr3L 14175440 intergenic D - chr3L 14175536 intergenic D - chr3L_10_14175001 chr3L_14175001 RAL-892 1465 chr3L 14194707 14194735 chr3L 14194803 14194831 11 96 4.5 2.0 3.2 2.6 124 chr3L 14194707 intron nuf + chr3L 14194769 intron nuf + chr3L 14194831 intron nuf + chr3L_11_14190001 chr3L_14190001 RAL-892 1466 chr3L 14245556 14245591 chr3L 14245670 14245704 1360 10 111 3.0 2.5 2.8 2.6 148 chr3L 14245556 3` UTR CR44561 - chr3L 14245630 3` UTR CR44561 - chr3L 14245704 intergenic CR44561 -,CR44560 + chr3L_10_14245001 chr3L_14245001 RAL-892 1467 chr3L 14267349 14267384 chr3L 14271810 14271845 F-element 11 4459 5.5 8.5 7.0 1.4 4496 chr3L 14267349 intergenic not near genes chr3L 14269597 intergenic not near genes chr3L 14271845 intergenic not near genes chr3L_11_14265001 chr3L_14265001 RAL-892 1468 chr3L 14295993 14296013 chr3L 14296478 14296519 roo 7 503 4.0 8.0 6.0 1.0 526 chr3L 14295993 intron fz + chr3L 14296256 intron fz + chr3L 14296519 intron fz + chr3L_7_14295001 chr3L_14295001 RAL-892 1469 chr3L 14312025 14312052 chr3L 14316833 14316886 X-element 5 4827 1.0 1.5 1.2 2.3 4861 chr3L 14312025 exon fz + chr3L 14314456 intron fz + chr3L 14316886 intron fz + chr3L_5_14310001 chr3L_14310001 RAL-892 1470 chr3L 14320634 14320659 chr3L 14320770 14320817 10 156 3.0 3.0 3.0 2.5 183 chr3L 14320634 intron fz + chr3L 14320726 intron fz + chr3L 14320817 intron fz + chr3L_10_14320001 chr3L_14320001 RAL-892 1471 chr3L 14343381 14343415 chr3L 14343478 14343512 7 97 9.0 1.0 5.0 1.2 131 chr3L 14343381 intron fz + chr3L 14343446 intron fz + chr3L 14343512 intron fz + chr3L_7_14340001 chr3L_14340001 RAL-892 1472 chr3L 14348897 14348930 chr3L 14349003 14349035 14 105 0.0 5.5 2.8 3.7 138 chr3L 14348897 intron fz + chr3L 14348966 intron fz + chr3L 14349035 intron fz + chr3L_14_14345001 chr3L_14345001 RAL-892 1473 chr3L 14369998 14370027 chr3L 14370099 14370103 5 89 4.5 4.0 4.2 1.0 105 chr3L 14369998 intergenic CG13481 - chr3L 14370050 intergenic CG13481 - chr3L 14370103 intergenic CG13481 - chr3L_5_14370001 chr3L_14370001 RAL-892 1474 chr3L 14371464 14371488 chr3L 14371744 14371768 10 280 3.5 2.5 3.0 2.5 304 chr3L 14371464 intergenic not near genes chr3L 14371616 intergenic not near genes chr3L 14371768 intergenic not near genes chr3L_10_14370001 chr3L_14370001 RAL-892 1475 chr3L 14395632 14395664 chr3L 14395756 14395788 5 124 5.0 1.0 3.0 1.2 156 chr3L 14395632 intergenic not near genes chr3L 14395710 intergenic not near genes chr3L 14395788 intergenic not near genes chr3L_5_14395001 chr3L_14395001 RAL-892 1476 chr3L 14411845 14411894 chr3L 14411944 14411993 11 97 4.5 2.0 3.2 2.6 148 chr3L 14411845 intron CG3919 + chr3L 14411919 intron CG3919 + chr3L 14411993 intron CG3919 + chr3L_11_14410001 chr3L_14410001 RAL-892 1477 chr3L 14462878 14462911 chr3L 14462986 14463018 11 108 0.0 4.5 2.2 3.4 140 chr3L 14462878 intron bbg - chr3L 14462948 intron bbg - chr3L 14463018 intron bbg - chr3L_11_14460001 chr3L_14460001 RAL-892 1478 chr3L 14468428 14468477 chr3L 14473654 14473703 copia 15 5226 2.0 2.5 2.2 4.7 5275 chr3L 14468428 intron bbg - chr3L 14471066 intron bbg - chr3L 14473703 intron bbg - chr3L_15_14470001 chr3L_14470001 RAL-892 1479 chr3L 14485995 14486048 chr3L 14486096 14486148 14 99 5.5 2.0 3.8 2.9 153 chr3L 14485995 intron bbg - chr3L 14486072 intron bbg - chr3L 14486148 intron bbg - chr3L_14_14485001 chr3L_14485001 RAL-892 1480 chr3L 14522097 14522123 chr3L 14522216 14522242 9 119 5.0 8.0 6.5 1.2 145 chr3L 14522097 intron bbg - chr3L 14522170 intron bbg - chr3L 14522242 intron bbg - chr3L_9_14520001 chr3L_14520001 RAL-892 1481 chr3L 14524320 14524356 chr3L 14529102 14529140 F-element 4 4783 3.0 0.0 1.5 1.6 4820 chr3L 14524320 intron bbg - chr3L 14526730 intron bbg - chr3L 14529140 intron bbg - chr3L_4_14525001 chr3L_14525001 RAL-892 1482 chr3L 14531201 14531240 chr3L 14531334 14531373 10 132 0.5 4.5 2.5 2.9 172 chr3L 14531201 intron bbg - chr3L 14531287 intron bbg - chr3L 14531373 intron bbg - chr3L_10_14530001 chr3L_14530001 RAL-892 1483 chr3L 14725591 14725622 chr3L 14728605 14728636 Doc 6 3011 4.5 9.5 7.0 0.8 3045 chr3L 14725591 intron ome + chr3L 14727114 intron ome + chr3L 14728636 intron ome + chr3L_6_14725001 chr3L_14725001 RAL-892 1484 chr3L 14741122 14741164 chr3L 14741220 14741261 11 94 4.5 4.5 4.5 2.0 139 chr3L 14741122 intron ome + chr3L 14741192 intron ome + chr3L 14741261 intron ome + chr3L_11_14740001 chr3L_14740001 RAL-892 1485 chr3L 14839020 14839049 chr3L 14839129 14839158 10 109 5.5 7.0 6.2 1.4 138 chr3L 14839020 intron CG17839 + chr3L 14839089 intron CG17839 + chr3L 14839158 intron CG17839 + chr3L_10_14835001 chr3L_14835001 RAL-892 1486 chr3L 14861785 14861803 chr3L 14861885 14861903 4 100 6.5 3.5 5.0 0.7 118 chr3L 14861785 intron CG17839 + chr3L 14861844 intron CG17839 + chr3L 14861903 intron CG17839 + chr3L_4_14860001 chr3L_14860001 RAL-892 1487 chr3L 14861804 14861828 chr3L 14861884 14861928 5 94 3.5 3.0 3.2 1.2 124 chr3L 14861804 intron CG17839 + chr3L 14861866 intron CG17839 + chr3L 14861928 intron CG17839 + chr3L_5_14860001 chr3L_14860001 RAL-892 1488 chr3L 14922085 14922109 chr3L 14922213 14922229 5 125 4.5 2.0 3.2 1.2 144 chr3L 14922085 intron DCX-EMAP + chr3L 14922157 intron DCX-EMAP + chr3L 14922229 intron DCX-EMAP + chr3L_5_14920001 chr3L_14920001 RAL-892 1489 chr3L 14933426 14933460 chr3L 14933528 14933562 11 102 1.0 4.5 2.8 2.9 136 chr3L 14933426 intron DCX-EMAP + chr3L 14933494 intron DCX-EMAP + chr3L 14933562 intron DCX-EMAP + chr3L_11_14930001 chr3L_14930001 RAL-892 1490 chr3L 14959968 14960016 chr3L 14960072 14960120 13 104 4.0 3.5 3.8 2.7 152 chr3L 14959968 intergenic not near genes chr3L 14960044 intergenic not near genes chr3L 14960120 intergenic not near genes chr3L_13_14960001 chr3L_14960001 RAL-892 1491 chr3L 14970744 14970760 chr3L 14971074 14971090 F-element 4 330 8.5 4.0 6.2 0.6 346 chr3L 14970744 intergenic Tom + chr3L 14970917 intergenic not near genes chr3L 14971090 intergenic not near genes chr3L_4_14970001 chr3L_14970001 RAL-892 1492 chr3L 15044531 15044578 chr3L 15044628 15044675 16 97 3.0 3.5 3.2 3.8 144 chr3L 15044531 intron Sytbeta - chr3L 15044603 intron Sytbeta - chr3L 15044675 intron Sytbeta - chr3L_16_15040001 chr3L_15040001 RAL-892 1493 chr3L 15053397 15053444 chr3L 15053756 15053797 8 358 1.0 5.0 3.0 2.0 400 chr3L 15053397 intron Sytbeta - chr3L 15053597 intron,3` UTR Sytbeta -,CG18649 - chr3L 15053797 intron,3` UTR Sytbeta -,CG18649 - chr3L_8_15050001 chr3L_15050001 RAL-892 1494 chr3L 15085028 15085075 chr3L 15086214 15086261 1360 14 1185 5.0 6.5 5.8 2.1 1233 chr3L 15085028 intron cp309 - chr3L 15085644 intron cp309 - chr3L 15086261 intron cp309 - chr3L_14_15085001 chr3L_15085001 RAL-892 1495 chr3L 15165028 15165034 chr3L 15165141 15165153 5 118 1.0 0.0 0.5 3.3 125 chr3L 15165028 intergenic not near genes chr3L 15165090 intergenic not near genes chr3L 15165153 intergenic not near genes chr3L_5_15165001 chr3L_15165001 RAL-892 1496 chr3L 15191711 15191751 chr3L 15191852 15191881 8 137 2.0 3.0 2.5 2.3 170 chr3L 15191711 intergenic not near genes chr3L 15191796 intergenic not near genes chr3L 15191881 intergenic not near genes chr3L_8_15190001 chr3L_15190001 RAL-892 1497 chr3L 15219725 15219774 chr3L 15219827 15219876 11 102 2.0 5.5 3.8 2.3 151 chr3L 15219725 intergenic not near genes chr3L 15219800 intergenic not near genes chr3L 15219876 intergenic not near genes chr3L_11_15215001 chr3L_15215001 RAL-892 1498 chr3L 15257412 15257444 chr3L 15257645 15257677 6 232 4.0 2.0 3.0 1.5 265 chr3L 15257412 intergenic not near genes chr3L 15257544 intergenic not near genes chr3L 15257677 intergenic not near genes chr3L_6_15255001 chr3L_15255001 RAL-892 1499 chr3L 15295761 15295799 chr3L 15298623 15298662 gypsy5 14 2863 7.0 7.0 7.0 1.8 2901 chr3L 15295761 intergenic not near genes chr3L 15297212 intergenic not near genes chr3L 15298662 intergenic Best4 + chr3L_14_15295001 chr3L_15295001 RAL-892 1500 chr3L 15320858 15320900 chr3L 15320951 15320977 6 87 3.5 4.5 4.0 1.2 119 chr3L 15320858 intergenic not near genes chr3L 15320918 intergenic not near genes chr3L 15320977 intergenic not near genes chr3L_6_15320001 chr3L_15320001 RAL-892 1501 chr3L 15358361 15358391 chr3L 15358506 15358542 9 150 4.5 8.5 6.5 1.2 181 chr3L 15358361 intergenic not near genes chr3L 15358452 intergenic not near genes chr3L 15358542 intergenic not near genes chr3L_9_15355001 chr3L_15355001 RAL-892 1502 chr3L 15381168 15381186 chr3L 15381476 15381519 6 329 4.5 3.0 3.8 1.2 351 chr3L 15381168 intergenic not near genes chr3L 15381344 intergenic not near genes chr3L 15381519 intergenic not near genes chr3L_6_15380001 chr3L_15380001 RAL-892 1503 chr3L 15393646 15393691 chr3L 15393868 15393913 12 222 3.5 3.5 3.5 2.7 267 chr3L 15393646 intergenic not near genes chr3L 15393780 intergenic not near genes chr3L 15393913 intergenic not near genes chr3L_12_15390001 chr3L_15390001 RAL-892 1504 chr3L 15418039 15418068 chr3L 15418127 15418172 10 95 4.0 7.5 5.8 1.5 133 chr3L 15418039 intergenic not near genes chr3L 15418106 intergenic not near genes chr3L 15418172 intergenic not near genes chr3L_10_15415001 chr3L_15415001 RAL-892 1505 chr3L 15422461 15422512 chr3L 15422563 15422615 13 104 2.0 2.5 2.2 4.1 154 chr3L 15422461 intergenic not near genes chr3L 15422538 intergenic not near genes chr3L 15422615 intergenic not near genes chr3L_13_15420001 chr3L_15420001 RAL-892 1506 chr3L 15423746 15423781 chr3L 15426610 15426645 opus 8 2864 4.0 6.5 5.2 1.3 2899 chr3L 15423746 intergenic not near genes chr3L 15425196 intergenic not near genes chr3L 15426645 intergenic not near genes chr3L_8_15425001 chr3L_15425001 RAL-892 1507 chr3L 15444635 15444681 chr3L 15444746 15444790 7 108 6.0 4.5 5.2 1.1 155 chr3L 15444635 intergenic not near genes chr3L 15444712 intergenic not near genes chr3L 15444790 intergenic not near genes chr3L_7_15440001 chr3L_15440001 RAL-892 1508 chr3L 15466018 15466136 chr3L 15466120 15466252 15 107 0.0 0.0 0.0 15.0 234 chr3L 15466018 intergenic not near genes chr3L 15466135 intergenic not near genes chr3L 15466252 intergenic not near genes chr3L_15_15465001 chr3L_15465001 RAL-892 1509 chr3L 15466506 15466529 chr3L 15466610 15466633 4 104 2.5 1.0 1.8 1.4 127 chr3L 15466506 intergenic not near genes chr3L 15466570 intergenic not near genes chr3L 15466633 intergenic not near genes chr3L_4_15465001 chr3L_15465001 RAL-892 1510 chr3L 15482584 15482628 chr3L 15482685 15482729 14 101 8.0 4.5 6.2 1.9 145 chr3L 15482584 intergenic not near genes chr3L 15482656 intergenic not near genes chr3L 15482729 intergenic not near genes chr3L_14_15480001 chr3L_15480001 RAL-892 1511 chr3L 15483041 15483088 chr3L 15483258 15483305 12 212 4.0 3.0 3.5 2.7 264 chr3L 15483041 intergenic not near genes chr3L 15483173 intergenic not near genes chr3L 15483305 intergenic not near genes chr3L_12_15480001 chr3L_15480001 RAL-892 1512 chr3L 15486917 15486942 chr3L 15487033 15487058 6 114 7.0 5.5 6.2 0.8 141 chr3L 15486917 intergenic not near genes chr3L 15486988 intergenic not near genes chr3L 15487058 intergenic not near genes chr3L_6_15485001 chr3L_15485001 RAL-892 1513 chr3L 15486945 15486964 chr3L 15487029 15487074 5 108 4.5 4.5 4.5 0.9 129 chr3L 15486945 intergenic not near genes chr3L 15487010 intergenic not near genes chr3L 15487074 intergenic not near genes chr3L_5_15485001 chr3L_15485001 RAL-892 1514 chr3L 15489045 15489089 chr3L 15489345 15489380 6 297 4.0 3.0 3.5 1.3 335 chr3L 15489045 intergenic not near genes chr3L 15489212 intergenic not near genes chr3L 15489380 intergenic not near genes chr3L_6_15485001 chr3L_15485001 RAL-892 1515 chr3L 15541602 15541641 chr3L 15541713 15541752 6 111 4.5 2.5 3.5 1.3 150 chr3L 15541602 intron CrebA + chr3L 15541677 intron CrebA + chr3L 15541752 intron CrebA + chr3L_6_15540001 chr3L_15540001 RAL-892 1516 chr3L 15554901 15554950 chr3L 15556708 15556757 S-element 15 1807 8.0 3.5 5.8 2.2 1856 chr3L 15554901 intron AGO2 + chr3L 15555829 intron AGO2 + chr3L 15556757 intron AGO2 + chr3L_15_15555001 chr3L_15555001 RAL-892 1517 chr3L 15596652 15596665 chr3L 15596749 15596762 5 97 6.0 6.0 6.0 0.7 110 chr3L 15596652 intron RhoGAP71E + chr3L 15596707 intron RhoGAP71E + chr3L 15596762 intron RhoGAP71E + chr3L_5_15595001 chr3L_15595001 RAL-892 1518 chr3L 15596667 15596692 chr3L 15596748 15596789 9 95 4.0 6.0 5.0 1.5 122 chr3L 15596667 intron RhoGAP71E + chr3L 15596728 intron RhoGAP71E + chr3L 15596789 intron RhoGAP71E + chr3L_9_15595001 chr3L_15595001 RAL-892 1519 chr3L 15600148 15600197 chr3L 15600253 15600318 5 113 3.5 0.0 1.8 1.8 170 chr3L 15600148 intron RhoGAP71E + chr3L 15600233 intron RhoGAP71E + chr3L 15600318 intron RhoGAP71E + chr3L_5_15600001 chr3L_15600001 RAL-892 1520 chr3L 15604567 15604580 chr3L 15604663 15604676 5 96 6.5 4.0 5.2 0.8 109 chr3L 15604567 intron RhoGAP71E + chr3L 15604622 intron RhoGAP71E + chr3L 15604676 intron RhoGAP71E + chr3L_5_15600001 chr3L_15600001 RAL-892 1521 chr3L 15633065 15633204 chr3L 15633155 15633304 22 96 0.0 1.0 0.5 14.7 239 chr3L 15633065 intron comm3 - chr3L 15633184 intron comm3 - chr3L 15633304 intron comm3 - chr3L_22_15630001 chr3L_15630001 RAL-892 1522 chr3L 15637178 15637194 chr3L 15637274 15637280 4 88 5.0 5.0 5.0 0.7 102 chr3L 15637178 intron comm3 - chr3L 15637229 intron comm3 - chr3L 15637280 intron comm3 - chr3L_4_15635001 chr3L_15635001 RAL-892 1523 chr3L 15638008 15638020 chr3L 15638165 15638177 4 156 6.5 3.5 5.0 0.7 169 chr3L 15638008 intron comm3 - chr3L 15638092 intron comm3 - chr3L 15638177 intron comm3 - chr3L_4_15635001 chr3L_15635001 RAL-892 1524 chr3L 15658643 15658666 chr3L 15658834 15658857 11 191 8.0 1.5 4.8 1.9 214 chr3L 15658643 intergenic Eig71Eh -,Eig71Eg + chr3L 15658750 intergenic Eig71Eh - chr3L 15658857 intergenic Eig71Eh - chr3L_11_15655001 chr3L_15655001 RAL-892 1525 chr3L 15742940 15742970 chr3L 15743121 15743150 5 180 5.5 0.0 2.8 1.3 210 chr3L 15742940 intergenic not near genes chr3L 15743045 intergenic not near genes chr3L 15743150 intergenic not near genes chr3L_5_15740001 chr3L_15740001 RAL-892 1526 chr3L 15760666 15760706 chr3L 15760771 15760809 5 105 3.0 0.5 1.8 1.8 143 chr3L 15760666 intergenic not near genes chr3L 15760738 intergenic not near genes chr3L 15760809 intergenic not near genes chr3L_5_15760001 chr3L_15760001 RAL-892 1527 chr3L 15778500 15778550 chr3L 15778671 15778721 7 171 5.0 3.0 4.0 1.4 221 chr3L 15778500 intergenic not near genes chr3L 15778610 intergenic not near genes chr3L 15778721 intergenic not near genes chr3L_7_15775001 chr3L_15775001 RAL-892 1528 chr3L 15784559 15784582 chr3L 15784671 15784699 5 116 4.5 1.5 3.0 1.2 140 chr3L 15784559 intergenic not near genes chr3L 15784629 intergenic not near genes chr3L 15784699 intergenic not near genes chr3L_5_15780001 chr3L_15780001 RAL-892 1529 chr3L 15840419 15840468 chr3L 15840527 15840570 4 104 3.0 0.0 1.5 1.6 151 chr3L 15840419 intron CG32150 - chr3L 15840494 intron CG32150 - chr3L 15840570 intron CG32150 - chr3L_4_15840001 chr3L_15840001 RAL-892 1530 chr3L 15852410 15852455 chr3L 15852667 15852712 10 256 2.5 4.0 3.2 2.4 302 chr3L 15852410 intron pHCl - chr3L 15852561 intron pHCl - chr3L 15852712 intron pHCl - chr3L_10_15850001 chr3L_15850001 RAL-892 1531 chr3L 15871578 15871615 chr3L 15871682 15871719 15 103 1.5 4.0 2.8 3.9 141 chr3L 15871578 intron pHCl - chr3L 15871648 intron pHCl - chr3L 15871719 intron pHCl - chr3L_15_15870001 chr3L_15870001 RAL-892 1532 chr3L 15916825 15916862 chr3L 15916922 15916959 14 95 5.5 1.5 3.5 3.1 134 chr3L 15916825 intron sff - chr3L 15916892 intron sff - chr3L 15916959 intron sff - chr3L_14_15915001 chr3L_15915001 RAL-892 1533 chr3L 15929221 15929229 chr3L 15938388 15938396 roo 5 9167 2.0 6.0 4.0 1.0 9175 chr3L 15929221 intron Pka-C3 - chr3L 15933808 intron Pka-C3 - chr3L 15938396 intron Pka-C3 - chr3L_5_15930001 chr3L_15930001 RAL-892 1534 chr3L 15946485 15946496 chr3L 15946591 15946602 8 105 10.0 0.0 5.0 1.3 117 chr3L 15946485 intron Pka-C3 - chr3L 15946544 intron Pka-C3 - chr3L 15946602 intron Pka-C3 - chr3L_8_15945001 chr3L_15945001 RAL-892 1535 chr3L 16015816 16015863 chr3L 16015914 16015961 9 97 2.5 6.0 4.2 1.7 145 chr3L 16015816 intergenic not near genes chr3L 16015888 intergenic not near genes chr3L 16015961 intergenic not near genes chr3L_9_16015001 chr3L_16015001 RAL-892 1536 chr3L 16070723 16070761 chr3L 16070820 16070858 14 97 4.0 2.0 3.0 3.5 135 chr3L 16070723 intron Mbs + chr3L 16070790 intron Mbs + chr3L 16070858 exon Mbs + chr3L_14_16070001 chr3L_16070001 RAL-892 1537 chr3L 16182055 16182088 chr3L 16182195 16182228 7 139 0.0 4.5 2.2 2.2 173 chr3L 16182055 intergenic not near genes chr3L 16182142 intergenic not near genes chr3L 16182228 intergenic not near genes chr3L_7_16180001 chr3L_16180001 RAL-892 1538 chr3L 16184091 16184141 chr3L 16188929 16188953 X-element 9 4833 2.5 2.5 2.5 2.6 4862 chr3L 16184091 intergenic not near genes chr3L 16186522 intergenic not near genes chr3L 16188953 intergenic not near genes chr3L_9_16185001 chr3L_16185001 RAL-892 1539 chr3L 16212796 16212837 chr3L 16212907 16212948 13 111 5.5 0.0 2.8 3.4 152 chr3L 16212796 intergenic CG13073 - chr3L 16212872 intergenic CG13073 - chr3L 16212948 intergenic CG13073 - chr3L_13_16210001 chr3L_16210001 RAL-892 1540 chr3L 16240771 16240778 chr3L 16240920 16240930 4 151 0.0 9.5 4.8 0.7 159 chr3L 16240771 intergenic not near genes chr3L 16240850 intergenic not near genes chr3L 16240930 intergenic not near genes chr3L_4_16240001 chr3L_16240001 RAL-892 1541 chr3L 16243651 16243679 chr3L 16243762 16243790 6 111 0.0 1.5 0.8 3.3 139 chr3L 16243651 intergenic not near genes chr3L 16243720 intergenic not near genes chr3L 16243790 intergenic not near genes chr3L_6_16240001 chr3L_16240001 RAL-892 1542 chr3L 16258368 16258420 chr3L 16258474 16258523 7 101 4.5 5.0 4.8 1.2 155 chr3L 16258368 intergenic not near genes chr3L 16258446 intergenic not near genes chr3L 16258523 intergenic not near genes chr3L_7_16255001 chr3L_16255001 RAL-892 1543 chr3L 16334180 16334222 chr3L 16334283 16334325 8 103 5.0 4.0 4.5 1.5 145 chr3L 16334180 intergenic CG13056 + chr3L 16334252 intergenic CG13056 + chr3L 16334325 intergenic not near genes chr3L_8_16330001 chr3L_16330001 RAL-892 1544 chr3L 16359938 16360005 chr3L 16360228 16360278 7 285 0.0 4.5 2.2 2.2 340 chr3L 16359938 intron CG45057 - chr3L 16360108 intron CG45057 - chr3L 16360278 intron CG45057 - chr3L_7_16360001 chr3L_16360001 RAL-892 1545 chr3L 16360873 16360890 chr3L 16360970 16360974 4 93 8.0 5.0 6.5 0.5 101 chr3L 16360873 intron CG45057 - chr3L 16360924 intron CG45057 - chr3L 16360974 intron CG45057 - chr3L_4_16360001 chr3L_16360001 RAL-892 1546 chr3L 16360893 16360911 chr3L 16360969 16361009 4 87 4.5 5.0 4.8 0.7 116 chr3L 16360893 intron CG45057 - chr3L 16360951 intron CG45057 - chr3L 16361009 intron CG45057 - chr3L_4_16360001 chr3L_16360001 RAL-892 1547 chr3L 16443828 16443871 chr3L 16446188 16446231 Doc 7 2359 3.5 2.5 3.0 1.8 2403 chr3L 16443828 intron,intron CG33158 +,dsx-c73A - chr3L 16445030 intron,intron CG33158 +,dsx-c73A - chr3L 16446231 intron,intron CG33158 +,dsx-c73A - chr3L_7_16445001 chr3L_16445001 RAL-892 1548 chr3L 16450002 16450053 chr3L 16450107 16450158 12 104 0.0 2.0 1.0 6.0 156 chr3L 16450002 intron,intron CG33158 +,dsx-c73A - chr3L 16450080 intron,intron CG33158 +,dsx-c73A - chr3L 16450158 intron,exon CG33158 +,dsx-c73A - chr3L_12_16450001 chr3L_16450001 RAL-892 1549 chr3L 16457527 16457553 chr3L 16457642 16457668 12 115 6.0 6.5 6.2 1.7 141 chr3L 16457527 intron CG33158 + chr3L 16457598 intron CG33158 + chr3L 16457668 intron CG33158 + chr3L_12_16455001 chr3L_16455001 RAL-892 1550 chr3L 16493960 16494006 chr3L 16494497 16494532 jockey 7 534 4.5 10.0 7.2 0.9 572 chr3L 16493960 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494246 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494532 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_7_16490001 chr3L_16490001 RAL-892 1551 chr3L 16506213 16506266 chr3L 16506320 16506373 22 107 3.5 3.5 3.5 4.9 160 chr3L 16506213 intron CG43373 - chr3L 16506293 intron CG43373 - chr3L 16506373 intron CG43373 - chr3L_22_16505001 chr3L_16505001 RAL-892 1552 chr3L 16563211 16563241 chr3L 16563312 16563339 11 101 8.0 0.0 4.0 2.2 128 chr3L 16563211 intergenic Mipp1 - chr3L 16563275 intergenic Mipp1 - chr3L 16563339 intergenic Mipp1 - chr3L_11_16560001 chr3L_16560001 RAL-892 1553 chr3L 16610674 16610706 chr3L 16610779 16610811 15 104 6.0 4.5 5.2 2.4 137 chr3L 16610674 3` UTR Su(P) - chr3L 16610742 exon Su(P) - chr3L 16610811 exon Su(P) - chr3L_15_16610001 chr3L_16610001 RAL-892 1554 chr3L 16610709 16610717 chr3L 16610774 16610822 4 90 4.0 3.5 3.8 0.8 113 chr3L 16610709 3` UTR Su(P) - chr3L 16610766 exon Su(P) - chr3L 16610822 exon Su(P) - chr3L_4_16610001 chr3L_16610001 RAL-892 1555 chr3L 16616491 16616540 chr3L 16621838 16621888 297 15 5347 4.0 5.5 4.8 2.6 5397 chr3L 16616491 3` UTR Abl - chr3L 16619190 3` UTR Abl - chr3L 16621888 3` UTR Abl - chr3L_15_16615001 chr3L_16615001 RAL-892 1556 chr3L 16669041 16669085 chr3L 16669327 16669348 7 273 3.0 1.5 2.2 2.2 307 chr3L 16669041 intergenic not near genes chr3L 16669194 intergenic not near genes chr3L 16669348 intergenic not near genes chr3L_7_16665001 chr3L_16665001 RAL-892 1557 chr3L 16684004 16684039 chr3L 16689245 16689280 copia 9 5241 5.0 3.5 4.2 1.7 5276 chr3L 16684004 intron,intron Lasp -,CG43954 - chr3L 16686642 intron,intron Lasp -,CG43954 - chr3L 16689280 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_9_16685001 chr3L_16685001 RAL-892 1558 chr3L 16728082 16728101 chr3L 16728181 16728214 6 106 3.5 0.0 1.8 2.1 132 chr3L 16728082 intergenic PGRP-SB1 -,Dbp73D - chr3L 16728148 intergenic PGRP-SB1 -,Dbp73D - chr3L 16728214 intergenic PGRP-SB1 -,Dbp73D - chr3L_6_16725001 chr3L_16725001 RAL-892 1559 chr3L 16802430 16802470 chr3L 16803606 16803636 8 1170 41.5 40.0 40.8 0.2 1206 chr3L 16802430 intron CG9674 - chr3L 16803033 intron CG9674 - chr3L 16803636 intron CG9674 - chr3L_8_16800001 chr3L_16800001 RAL-892 1560 chr3L 16807766 16808049 chr3L 16807865 16808145 27 97 8.5 7.0 7.8 3.1 379 chr3L 16807766 intron nudC + chr3L 16807956 intron nudC + chr3L 16808145 intron nudC + chr3L_27_16805001 chr3L_16805001 RAL-892 1561 chr3L 16817869 16817903 chr3L 16818023 16818059 8 157 3.5 4.5 4.0 1.6 190 chr3L 16817869 intron,intron nudC +,CG13024 - chr3L 16817964 intron,intron nudC +,CG13024 - chr3L 16818059 intron,intron nudC +,CG13024 - chr3L_8_16815001 chr3L_16815001 RAL-892 1562 chr3L 16845018 16845045 chr3L 16845151 16845178 8 132 2.0 7.5 4.8 1.4 160 chr3L 16845018 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845098 intergenic CG9669 -,CG9715 + chr3L 16845178 intergenic CG9669 -,CG9715 + chr3L_8_16845001 chr3L_16845001 RAL-892 1563 chr3L 16873324 16873358 chr3L 16873449 16873483 14 125 10.5 1.0 5.8 2.1 159 chr3L 16873324 intron Lmpt + chr3L 16873404 intron Lmpt + chr3L 16873483 intron Lmpt + chr3L_14_16870001 chr3L_16870001 RAL-892 1564 chr3L 16874521 16874572 chr3L 16874702 16874753 19 181 3.0 7.0 5.0 3.2 232 chr3L 16874521 intron Lmpt + chr3L 16874637 intron Lmpt + chr3L 16874753 intron Lmpt + chr3L_19_16870001 chr3L_16870001 RAL-892 1565 chr3L 16945717 16945739 chr3L 16954885 16954912 roo 7 9170 6.0 5.0 5.5 1.1 9195 chr3L 16945717 exon Obp73a + chr3L 16950314 intergenic not near genes chr3L 16954912 5` UTR Nc73EF + chr3L_7_16950001 chr3L_16950001 RAL-892 1566 chr3L 16945740 16945761 chr3L 16954884 16954894 roo 8 9155 3.5 5.0 4.2 1.5 9154 chr3L 16945740 exon Obp73a + chr3L 16950317 intergenic not near genes chr3L 16954894 5` UTR Nc73EF + chr3L_8_16950001 chr3L_16950001 RAL-892 1567 chr3L 16972041 16972073 chr3L 16972137 16972168 11 96 4.0 4.5 4.2 2.1 127 chr3L 16972041 intron Exn + chr3L 16972104 intron Exn + chr3L 16972168 intron Exn + chr3L_11_16970001 chr3L_16970001 RAL-892 1568 chr3L 16989521 16989535 chr3L 16989585 16989620 5 71 2.0 3.0 2.5 1.4 99 chr3L 16989521 intron Exn + chr3L 16989570 intron Exn + chr3L 16989620 intron Exn + chr3L_5_16985001 chr3L_16985001 RAL-892 1569 chr3L 17034913 17034961 chr3L 17035121 17035169 G2 22 208 1.0 2.0 1.5 8.8 256 chr3L 17034913 intergenic not near genes chr3L 17035041 intergenic not near genes chr3L 17035169 intergenic beg + chr3L_22_17035001 chr3L_17035001 RAL-892 1570 chr3L 17084996 17085034 chr3L 17094164 17094203 roo 18 9169 5.0 5.5 5.2 2.9 9207 chr3L 17084996 intron Rbp6 - chr3L 17089600 intron Rbp6 - chr3L 17094203 intron Rbp6 - chr3L_18_17085001 chr3L_17085001 RAL-892 1571 chr3L 17120632 17120685 chr3L 17120728 17120781 19 96 4.5 2.0 3.2 4.5 149 chr3L 17120632 intron Rbp6 - chr3L 17120706 intron Rbp6 - chr3L 17120781 intron Rbp6 - chr3L_19_17120001 chr3L_17120001 RAL-892 1572 chr3L 17149148 17149160 chr3L 17149249 17149261 5 101 7.5 0.0 3.8 1.0 113 chr3L 17149148 intron Rbp6 - chr3L 17149204 intron Rbp6 - chr3L 17149261 intron Rbp6 - chr3L_5_17145001 chr3L_17145001 RAL-892 1573 chr3L 17153876 17153922 chr3L 17154141 17154167 10 256 4.5 1.5 3.0 2.5 291 chr3L 17153876 intron Rbp6 - chr3L 17154022 intron Rbp6 - chr3L 17154167 intron Rbp6 - chr3L_10_17150001 chr3L_17150001 RAL-892 1574 chr3L 17310048 17310088 chr3L 17310160 17310197 7 111 0.0 2.5 1.2 3.2 149 chr3L 17310048 intergenic not near genes chr3L 17310122 intergenic not near genes chr3L 17310197 intergenic not near genes chr3L_7_17310001 chr3L_17310001 RAL-892 1575 chr3L 17331047 17331093 chr3L 17331157 17331203 16 110 4.0 4.0 4.0 3.2 156 chr3L 17331047 intergenic not near genes chr3L 17331125 intergenic not near genes chr3L 17331203 intergenic not near genes chr3L_16_17330001 chr3L_17330001 RAL-892 1576 chr3L 17510729 17510763 chr3L 17510816 17510867 16 99 2.0 0.5 1.2 7.3 138 chr3L 17510729 exon Oatp74D + chr3L 17510798 intron Oatp74D + chr3L 17510867 intron Oatp74D + chr3L_16_17510001 chr3L_17510001 RAL-892 1577 chr3L 17537750 17537789 chr3L 17537849 17537888 11 96 6.0 8.0 7.0 1.4 138 chr3L 17537750 intron Nedd4 + chr3L 17537819 intron Nedd4 + chr3L 17537888 intron Nedd4 + chr3L_11_17535001 chr3L_17535001 RAL-892 1578 chr3L 17578521 17578569 chr3L 17578642 17578691 6 121 3.5 0.0 1.8 2.1 170 chr3L 17578521 intron Eip74EF - chr3L 17578606 intron Eip74EF - chr3L 17578691 intron Eip74EF - chr3L_6_17575001 chr3L_17575001 RAL-892 1579 chr3L 17592765 17592818 chr3L 17592876 17592929 26 111 5.0 3.0 4.0 5.2 164 chr3L 17592765 intron Eip74EF - chr3L 17592847 intron Eip74EF - chr3L 17592929 intron Eip74EF - chr3L_26_17590001 chr3L_17590001 RAL-892 1580 chr3L 17624322 17624358 chr3L 17624419 17624455 13 97 6.0 4.0 5.0 2.2 133 chr3L 17624322 intron CG7510 + chr3L 17624388 intron CG7510 + chr3L 17624455 intron CG7510 + chr3L_13_17620001 chr3L_17620001 RAL-892 1581 chr3L 17632701 17632754 chr3L 17632834 17632887 13 133 0.0 2.0 1.0 6.5 186 chr3L 17632701 intergenic CR44567 -,CR44566 + chr3L 17632794 intergenic CR44567 - chr3L 17632887 intergenic CR44567 - chr3L_13_17630001 chr3L_17630001 RAL-892 1582 chr3L 17690831 17690883 chr3L 17690931 17690980 7 99 0.0 4.5 2.2 2.2 149 chr3L 17690831 intron Ccn + chr3L 17690906 intron Ccn + chr3L 17690980 intron Ccn + chr3L_7_17690001 chr3L_17690001 RAL-892 1583 chr3L 17702345 17702375 chr3L 17702448 17702479 7 102 1.5 5.0 3.2 1.7 134 chr3L 17702345 intron Ccn + chr3L 17702412 intron Ccn + chr3L 17702479 intron Ccn + chr3L_7_17700001 chr3L_17700001 RAL-892 1584 chr3L 17730836 17730880 chr3L 17738186 17738230 mdg1 11 7350 4.5 6.5 5.5 1.7 7394 chr3L 17730836 intron Ccn + chr3L 17734533 intron Ccn + chr3L 17738230 intron Ccn + chr3L_11_17730001 chr3L_17730001 RAL-892 1585 chr3L 17787674 17787694 chr3L 17787787 17787807 11 113 7.5 11.5 9.5 1.0 133 chr3L 17787674 intergenic not near genes chr3L 17787740 intergenic not near genes chr3L 17787807 intergenic not near genes chr3L_11_17785001 chr3L_17785001 RAL-892 1586 chr3L 17790185 17790451 chr3L 17790306 17790597 8 129 6.0 1.5 3.8 1.7 412 chr3L 17790185 intergenic not near genes chr3L 17790391 intergenic not near genes chr3L 17790597 intergenic CG42815 - chr3L_8_17790001 chr3L_17790001 RAL-892 1587 chr3L 17790453 17790622 chr3L 17790608 17790907 12 221 0.0 0.0 0.0 12.0 454 chr3L 17790453 intergenic not near genes chr3L 17790680 intergenic CG42815 - chr3L 17790907 intergenic CG42815 - chr3L_12_17790001 chr3L_17790001 RAL-892 1588 chr3L 17799807 17799839 chr3L 17801614 17801646 S-element 12 1807 7.0 5.5 6.2 1.7 1839 chr3L 17799807 intron NUCB1 - chr3L 17800726 intron NUCB1 - chr3L 17801646 intron NUCB1 - chr3L_12_17800001 chr3L_17800001 RAL-892 1589 chr3L 17834311 17834351 chr3L 17834495 17834535 10 184 0.0 2.5 1.2 4.5 224 chr3L 17834311 intron Grd + chr3L 17834423 intron Grd + chr3L 17834535 intron Grd + chr3L_10_17830001 chr3L_17830001 RAL-892 1590 chr3L 17837605 17837650 chr3L 17837713 17837758 12 107 2.0 2.0 2.0 4.0 153 chr3L 17837605 exon Grd + chr3L 17837682 intron Grd + chr3L 17837758 exon Grd + chr3L_12_17835001 chr3L_17835001 RAL-892 1591 chr3L 17918358 17918401 chr3L 17921179 17921224 opus 6 2822 2.0 4.5 3.2 1.4 2866 chr3L 17918358 intergenic not near genes chr3L 17919791 intergenic not near genes chr3L 17921224 intergenic not near genes chr3L_6_17915001 chr3L_17915001 RAL-892 1592 chr3L 17939047 17939089 chr3L 17939167 17939197 15 119 7.5 5.0 6.2 2.1 150 chr3L 17939047 intron CG43174 + chr3L 17939122 intron CG43174 + chr3L 17939197 intron CG43174 + chr3L_15_17935001 chr3L_17935001 RAL-892 1593 chr3L 17990112 17990123 chr3L 17990186 17990206 5 83 7.5 6.5 7.0 0.6 94 chr3L 17990112 intron Eip75B - chr3L 17990159 intron Eip75B - chr3L 17990206 intron Eip75B - chr3L_5_17990001 chr3L_17990001 RAL-892 1594 chr3L 17991563 17991586 chr3L 17991661 17991683 5 97 3.5 5.0 4.2 1.0 120 chr3L 17991563 intron Eip75B - chr3L 17991623 intron Eip75B - chr3L 17991683 intron Eip75B - chr3L_5_17990001 chr3L_17990001 RAL-892 1595 chr3L 18006203 18006254 chr3L 18006347 18006396 12 143 3.5 3.0 3.2 2.9 193 chr3L 18006203 intron Eip75B - chr3L 18006300 intron Eip75B - chr3L 18006396 intron Eip75B - chr3L_12_18005001 chr3L_18005001 RAL-892 1596 chr3L 18013952 18013974 chr3L 18014061 18014073 4 106 6.0 0.5 3.2 1.0 121 chr3L 18013952 intron Eip75B - chr3L 18014012 intron Eip75B - chr3L 18014073 intron Eip75B - chr3L_4_18010001 chr3L_18010001 RAL-892 1597 chr3L 18019538 18019546 chr3L 18019685 18019693 4 147 3.5 0.5 2.0 1.3 155 chr3L 18019538 intron Eip75B - chr3L 18019616 intron Eip75B - chr3L 18019693 intron Eip75B - chr3L_4_18015001 chr3L_18015001 RAL-892 1598 chr3L 18026264 18026313 chr3L 18026372 18026421 16 108 2.0 6.0 4.0 3.2 157 chr3L 18026264 intron Eip75B - chr3L 18026342 intron Eip75B - chr3L 18026421 intron Eip75B - chr3L_16_18025001 chr3L_18025001 RAL-892 1599 chr3L 18029937 18029967 chr3L 18030034 18030064 5 97 4.5 0.0 2.2 1.6 127 chr3L 18029937 intron Eip75B - chr3L 18030000 intron Eip75B - chr3L 18030064 intron Eip75B - chr3L_5_18030001 chr3L_18030001 RAL-892 1600 chr3L 18042489 18042508 chr3L 18042587 18042606 7 98 0.0 3.0 1.5 2.8 117 chr3L 18042489 intron Eip75B - chr3L 18042548 intron Eip75B - chr3L 18042606 intron Eip75B - chr3L_7_18040001 chr3L_18040001 RAL-892 1601 chr3L 18045012 18045045 chr3L 18045098 18045113 10 89 5.5 7.5 6.5 1.3 101 chr3L 18045012 intron Eip75B - chr3L 18045062 intron Eip75B - chr3L 18045113 intron Eip75B - chr3L_10_18045001 chr3L_18045001 RAL-892 1602 chr3L 18047686 18047741 chr3L 18056762 18056818 roo 19 9076 3.0 1.5 2.2 5.9 9132 chr3L 18047686 intron Eip75B - chr3L 18052252 intron Eip75B - chr3L 18056818 intron Eip75B - chr3L_19_18050001 chr3L_18050001 RAL-892 1603 chr3L 18057954 18058010 chr3L 18058075 18058114 10 117 2.5 1.0 1.8 3.6 160 chr3L 18057954 intron Eip75B - chr3L 18058034 intron Eip75B - chr3L 18058114 intron Eip75B - chr3L_10_18055001 chr3L_18055001 RAL-892 1604 chr3L 18066818 18066859 chr3L 18066964 18067005 18 146 3.5 5.5 4.5 3.3 187 chr3L 18066818 intergenic not near genes chr3L 18066912 intergenic not near genes chr3L 18067005 intergenic not near genes chr3L_18_18065001 chr3L_18065001 RAL-892 1605 chr3L 18068815 18068847 chr3L 18068939 18068971 8 123 4.0 4.5 4.2 1.5 156 chr3L 18068815 exon CG44006 - chr3L 18068893 intron CG44006 - chr3L 18068971 exon CG44006 - chr3L_8_18065001 chr3L_18065001 RAL-892 1606 chr3L 18085309 18085332 chr3L 18085664 18085681 5 353 2.5 2.5 2.5 1.4 372 chr3L 18085309 3` UTR,3` UTR CR43253 -,CR32194 - chr3L 18085495 3` UTR CR32194 - chr3L 18085681 3` UTR CR32194 - chr3L_5_18085001 chr3L_18085001 RAL-892 1607 chr3L 18099114 18099123 chr3L 18099535 18099544 5 420 5.0 7.0 6.0 0.7 430 chr3L 18099114 intron CG13698 - chr3L 18099329 intron CG13698 - chr3L 18099544 intron CG13698 - chr3L_5_18095001 chr3L_18095001 RAL-892 1608 chr3L 18104327 18104381 chr3L 18104430 18104483 12 100 1.5 3.5 2.5 3.4 156 chr3L 18104327 intron CG13698 - chr3L 18104405 intron CG13698 - chr3L 18104483 intron CG13698 - chr3L_12_18100001 chr3L_18100001 RAL-892 1609 chr3L 18112830 18112873 chr3L 18112926 18112969 11 94 4.5 3.0 3.8 2.3 139 chr3L 18112830 3` UTR mus304 + chr3L 18112900 intergenic mus304 +,CG32195 +,CG7341 + chr3L 18112969 5` UTR,5` UTR CG32195 +,CG7341 + chr3L_11_18110001 chr3L_18110001 RAL-892 1610 chr3L 18118842 18118878 chr3L 18118938 18118974 8 96 6.5 7.0 6.8 1.0 132 chr3L 18118842 3` UTR,intron CG32195 +,CG7341 + chr3L 18118908 3` UTR,intron CG32195 +,CG7341 + chr3L 18118974 3` UTR,intron CG32195 +,CG7341 + chr3L_8_18115001 chr3L_18115001 RAL-892 1611 chr3L 18136667 18136686 chr3L 18136765 18136784 14 98 0.0 5.5 2.8 3.7 117 chr3L 18136667 intergenic CR44669 - chr3L 18136726 intergenic CR44669 - chr3L 18136784 intergenic not near genes chr3L_14_18135001 chr3L_18135001 RAL-892 1612 chr3L 18160660 18160666 chr3L 18160762 18160768 4 101 6.0 4.5 5.2 0.6 108 chr3L 18160660 intron CG13699 - chr3L 18160714 intron CG13699 - chr3L 18160768 intron CG13699 - chr3L_4_18160001 chr3L_18160001 RAL-892 1613 chr3L 18163968 18164237 chr3L 18164190 18164422 14 209 0.0 0.0 0.0 14.0 454 chr3L 18163968 intergenic not near genes chr3L 18164195 intergenic not near genes chr3L 18164422 intergenic not near genes chr3L_14_18160001 chr3L_18160001 RAL-892 1614 chr3L 18172670 18172677 chr3L 18172766 18172773 4 96 8.0 0.0 4.0 0.8 103 chr3L 18172670 intron W - chr3L 18172722 intron W - chr3L 18172773 intron W - chr3L_4_18170001 chr3L_18170001 RAL-892 1615 chr3L 18189568 18189578 chr3L 18190215 18190219 S-element 4 646 6.5 5.0 5.8 0.6 651 chr3L 18189568 intergenic not near genes chr3L 18189894 intergenic not near genes chr3L 18190219 intergenic not near genes chr3L_4_18185001 chr3L_18185001 RAL-892 1616 chr3L 18198930 18198931 chr3L 24821492 24821494 7 6622563 20.0 9.0 14.5 0.5 6622564 chr3L 18198930 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_7_21510001 chr3L_21510001 RAL-892 1617 chr3L 18209195 18209200 chr3L 18209301 18209306 5 106 4.0 9.0 6.5 0.7 111 chr3L 18209195 intergenic not near genes chr3L 18209250 intergenic not near genes chr3L 18209306 intergenic not near genes chr3L_5_18205001 chr3L_18205001 RAL-892 1618 chr3L 18223144 18223186 chr3L 18223247 18223301 8 106 5.0 0.0 2.5 2.3 157 chr3L 18223144 intergenic not near genes chr3L 18223222 intergenic not near genes chr3L 18223301 intergenic not near genes chr3L_8_18220001 chr3L_18220001 RAL-892 1619 chr3L 18246953 18246992 chr3L 18247050 18247075 15 93 2.0 1.5 1.8 5.4 122 chr3L 18246953 intergenic not near genes chr3L 18247014 intergenic not near genes chr3L 18247075 intergenic not near genes chr3L_15_18245001 chr3L_18245001 RAL-892 1620 chr3L 18248936 18248985 chr3L 18249054 18249103 16 116 4.0 2.5 3.2 3.8 167 chr3L 18248936 intergenic not near genes chr3L 18249020 intergenic not near genes chr3L 18249103 intergenic not near genes chr3L_16_18245001 chr3L_18245001 RAL-892 1621 chr3L 18258839 18258882 chr3L 18258985 18259028 17 145 3.0 1.5 2.2 5.3 189 chr3L 18258839 intergenic not near genes chr3L 18258934 intergenic not near genes chr3L 18259028 intergenic not near genes chr3L_17_18255001 chr3L_18255001 RAL-892 1622 chr3L 18262452 18262480 chr3L 18262555 18262583 8 103 3.0 4.5 3.8 1.7 131 chr3L 18262452 intergenic not near genes chr3L 18262518 intergenic not near genes chr3L 18262583 intergenic not near genes chr3L_8_18260001 chr3L_18260001 RAL-892 1623 chr3L 18267825 18267991 chr3L 18267922 18268088 32 97 4.0 4.0 4.0 6.4 263 chr3L 18267825 intergenic not near genes chr3L 18267956 intergenic not near genes chr3L 18268088 intergenic not near genes chr3L_32_18265001 chr3L_18265001 RAL-892 1624 chr3L 18276080 18276099 chr3L 18276195 18276214 7 115 4.0 3.0 3.5 1.6 134 chr3L 18276080 intergenic not near genes chr3L 18276147 intergenic not near genes chr3L 18276214 intergenic not near genes chr3L_7_18275001 chr3L_18275001 RAL-892 1625 chr3L 18376059 18376112 chr3L 18376168 18376221 10 107 3.5 0.5 2.0 3.3 162 chr3L 18376059 intergenic not near genes chr3L 18376140 intergenic not near genes chr3L 18376221 intergenic not near genes chr3L_10_18375001 chr3L_18375001 RAL-892 1626 chr3L 18406115 18406154 chr3L 18406211 18406250 4 96 1.5 3.0 2.2 1.2 135 chr3L 18406115 intergenic not near genes chr3L 18406182 intergenic not near genes chr3L 18406250 intergenic not near genes chr3L_4_18405001 chr3L_18405001 RAL-892 1627 chr3L 18408717 18408744 chr3L 18408823 18408850 10 105 6.0 4.5 5.2 1.6 133 chr3L 18408717 intergenic not near genes chr3L 18408784 intergenic not near genes chr3L 18408850 intergenic not near genes chr3L_10_18405001 chr3L_18405001 RAL-892 1628 chr3L 18436043 18436092 chr3L 18436161 18436210 19 118 3.5 3.5 3.5 4.2 167 chr3L 18436043 intergenic not near genes chr3L 18436126 intergenic not near genes chr3L 18436210 intergenic not near genes chr3L_19_18435001 chr3L_18435001 RAL-892 1629 chr3L 18445237 18445281 chr3L 18445328 18445379 13 96 2.5 1.5 2.0 4.3 142 chr3L 18445237 intergenic not near genes chr3L 18445308 intergenic not near genes chr3L 18445379 intergenic not near genes chr3L_13_18445001 chr3L_18445001 RAL-892 1630 chr3L 18448606 18448613 chr3L 18448718 18448725 5 112 6.5 2.5 4.5 0.9 119 chr3L 18448606 intergenic not near genes chr3L 18448666 intergenic not near genes chr3L 18448725 intergenic not near genes chr3L_5_18445001 chr3L_18445001 RAL-892 1631 chr3L 18456258 18456298 chr3L 18456366 18456406 8 108 3.0 4.5 3.8 1.7 148 chr3L 18456258 intergenic CR44670 - chr3L 18456332 intergenic CR44670 - chr3L 18456406 3` UTR CR44670 - chr3L_8_18455001 chr3L_18455001 RAL-892 1632 chr3L 18479250 18479258 chr3L 18479348 18479356 6 98 4.0 3.0 3.5 1.3 106 chr3L 18479250 intergenic CR44673 + chr3L 18479303 intergenic CR44673 + chr3L 18479356 intergenic CR44673 + chr3L_6_18475001 chr3L_18475001 RAL-892 1633 chr3L 18506118 18506160 chr3L 18509601 18509628 F-element 18 3479 5.0 6.0 5.5 2.8 3510 chr3L 18506118 intergenic not near genes chr3L 18507873 intergenic not near genes chr3L 18509628 intergenic not near genes chr3L_18_18505001 chr3L_18505001 RAL-892 1634 chr3L 18514883 18514934 chr3L 18520094 18520145 BS 16 5210 7.0 7.5 7.2 2.0 5262 chr3L 18514883 intergenic not near genes chr3L 18517514 intergenic not near genes chr3L 18520145 intergenic not near genes chr3L_16_18515001 chr3L_18515001 RAL-892 1635 chr3L 18528608 18528658 chr3L 18537789 18537839 roo 17 9181 5.0 3.5 4.2 3.3 9231 chr3L 18528608 intergenic not near genes chr3L 18533224 intergenic not near genes chr3L 18537839 intergenic not near genes chr3L_17_18530001 chr3L_18530001 RAL-892 1636 chr3L 18546692 18546737 chr3L 18546806 18546834 12 107 2.0 3.5 2.8 3.2 142 chr3L 18546692 intergenic not near genes chr3L 18546763 intergenic not near genes chr3L 18546834 intergenic not near genes chr3L_12_18545001 chr3L_18545001 RAL-892 1637 chr3L 18585526 18585544 chr3L 18585622 18585640 8 95 8.0 0.5 4.2 1.5 114 chr3L 18585526 intergenic not near genes chr3L 18585583 intergenic not near genes chr3L 18585640 intergenic not near genes chr3L_8_18585001 chr3L_18585001 RAL-892 1638 chr3L 18590259 18590286 chr3L 18590355 18590383 6 97 5.5 7.5 6.5 0.8 124 chr3L 18590259 intergenic CG7271 + chr3L 18590321 intergenic CG7271 + chr3L 18590383 intergenic CG7271 + chr3L_6_18590001 chr3L_18590001 RAL-892 1639 chr3L 18593933 18593971 chr3L 18595933 18595961 Doc 18 1998 7.0 0.0 3.5 4.0 2028 chr3L 18593933 intergenic term - chr3L 18594947 intergenic not near genes chr3L 18595961 intergenic CR45389 + chr3L_18_18590001 chr3L_18590001 RAL-892 1640 chr3L 18638571 18638609 chr3L 18638685 18638722 11 113 5.0 9.0 7.0 1.4 151 chr3L 18638571 intron MYPT-75D + chr3L 18638646 intron MYPT-75D + chr3L 18638722 intron MYPT-75D + chr3L_11_18635001 chr3L_18635001 RAL-892 1641 chr3L 18656163 18656219 chr3L 18656268 18656289 14 97 0.5 2.0 1.2 6.4 126 chr3L 18656163 intron MYPT-75D + chr3L 18656226 intron MYPT-75D + chr3L 18656289 intron MYPT-75D + chr3L_14_18655001 chr3L_18655001 RAL-892 1642 chr3L 18710771 18710790 chr3L 18718741 18718760 Stalker2 11 7970 3.5 7.5 5.5 1.7 7989 chr3L 18710771 intergenic not near genes chr3L 18714766 intergenic not near genes chr3L 18718760 intergenic not near genes chr3L_11_18710001 chr3L_18710001 RAL-892 1643 chr3L 18721764 18721806 chr3L 18721875 18721914 8 108 3.0 5.0 4.0 1.6 150 chr3L 18721764 intergenic CG12477 - chr3L 18721839 intergenic CG12477 - chr3L 18721914 3` UTR CG12477 - chr3L_8_18720001 chr3L_18720001 RAL-892 1644 chr3L 18772391 18772438 chr3L 18781092 18781117 roo 16 8700 3.0 5.5 4.2 3.1 8726 chr3L 18772391 intron ftz-f1 - chr3L 18776754 intron ftz-f1 - chr3L 18781117 intron ftz-f1 - chr3L_16_18775001 chr3L_18775001 RAL-892 1645 chr3L 18810131 18810177 chr3L 18810228 18810274 19 97 3.0 3.0 3.0 4.8 143 chr3L 18810131 intron CG14073 - chr3L 18810202 intron CG14073 - chr3L 18810274 intron CG14073 - chr3L_19_18810001 chr3L_18810001 RAL-892 1646 chr3L 18843847 18843875 chr3L 18843965 18843993 21 117 7.0 3.0 5.0 3.5 146 chr3L 18843847 intron Indy - chr3L 18843920 intron Indy - chr3L 18843993 intron Indy - chr3L_21_18840001 chr3L_18840001 RAL-892 1647 chr3L 18885970 18886013 chr3L 18886066 18886109 22 96 0.0 4.5 2.2 6.9 139 chr3L 18885970 intron CG3961 - chr3L 18886040 intron CG3961 - chr3L 18886109 intron CG3961 - chr3L_22_18885001 chr3L_18885001 RAL-892 1648 chr3L 18924459 18924509 chr3L 18924555 18924605 14 96 1.0 2.0 1.5 5.6 146 chr3L 18924459 intron CG32204 - chr3L 18924532 intron CG32204 - chr3L 18924605 intron CG32204 - chr3L_14_18920001 chr3L_18920001 RAL-892 1649 chr3L 18928304 18928329 chr3L 18928411 18928436 8 105 5.0 7.5 6.2 1.1 132 chr3L 18928304 intron CG32204 - chr3L 18928370 intron CG32204 - chr3L 18928436 intron CG32204 - chr3L_8_18925001 chr3L_18925001 RAL-892 1650 chr3L 18932258 18932306 chr3L 18932384 18932416 15 122 4.0 3.5 3.8 3.1 158 chr3L 18932258 intron CG32204 - chr3L 18932337 intron CG32204 - chr3L 18932416 intron CG32204 - chr3L_15_18930001 chr3L_18930001 RAL-892 1651 chr3L 18933605 18933660 chr3L 18933719 18933773 15 113 3.5 3.0 3.2 3.6 168 chr3L 18933605 intron CG32204 - chr3L 18933689 intron CG32204 - chr3L 18933773 intron CG32204 - chr3L_15_18930001 chr3L_18930001 RAL-892 1652 chr3L 18935816 18935865 chr3L 18935925 18935974 17 109 2.5 3.5 3.0 4.2 158 chr3L 18935816 intron CG32204 - chr3L 18935895 intron CG32204 - chr3L 18935974 intron CG32204 - chr3L_17_18935001 chr3L_18935001 RAL-892 1653 chr3L 18941156 18941207 chr3L 18941287 18941338 11 129 4.0 6.0 5.0 1.8 182 chr3L 18941156 intron CG32204 - chr3L 18941247 intron CG32204 - chr3L 18941338 intron CG32204 - chr3L_11_18940001 chr3L_18940001 RAL-892 1654 chr3L 18969589 18969616 chr3L 18969702 18969709 6 110 5.5 4.5 5.0 1.0 120 chr3L 18969589 intergenic not near genes chr3L 18969649 intergenic not near genes chr3L 18969709 intergenic not near genes chr3L_6_18965001 chr3L_18965001 RAL-892 1655 chr3L 19008837 19008870 chr3L 19009195 19009227 jockey 9 357 1.5 3.0 2.2 2.8 390 chr3L 19008837 intron nkd - chr3L 19009032 intron nkd - chr3L 19009227 intron nkd - chr3L_9_19005001 chr3L_19005001 RAL-892 1656 chr3L 19115644 19115662 chr3L 19115829 19115858 BS 6 194 7.5 6.0 6.8 0.8 214 chr3L 19115644 intron CG14082 - chr3L 19115751 intron CG14082 - chr3L 19115858 intron CG14082 - chr3L_6_19115001 chr3L_19115001 RAL-892 1657 chr3L 19117033 19117070 chr3L 19124492 19124527 mdg1 9 7463 6.0 2.5 4.2 1.7 7494 chr3L 19117033 intron CG14082 - chr3L 19120780 intron CG14082 - chr3L 19124527 intron CG14082 - chr3L_9_19120001 chr3L_19120001 RAL-892 1658 chr3L 19182364 19182416 chr3L 19182465 19182517 11 100 1.5 3.0 2.2 3.4 153 chr3L 19182364 intron fz2 - chr3L 19182440 intron fz2 - chr3L 19182517 intron fz2 - chr3L_11_19180001 chr3L_19180001 RAL-892 1659 chr3L 19194778 19194795 chr3L 19194869 19194901 4 96 5.5 6.5 6.0 0.6 123 chr3L 19194778 intron fz2 - chr3L 19194840 intron fz2 - chr3L 19194901 intron fz2 - chr3L_4_19190001 chr3L_19190001 RAL-892 1660 chr3L 19208054 19208079 chr3L 19209432 19209471 Doc 11 1391 4.0 2.0 3.0 2.8 1417 chr3L 19208054 intron fz2 - chr3L 19208762 intron fz2 - chr3L 19209471 intron fz2 - chr3L_11_19205001 chr3L_19205001 RAL-892 1661 chr3L 19210103 19210141 chr3L 19210219 19210257 11 115 0.0 1.0 0.5 7.3 154 chr3L 19210103 intron fz2 - chr3L 19210180 intron fz2 - chr3L 19210257 intron fz2 - chr3L_11_19210001 chr3L_19210001 RAL-892 1662 chr3L 19248844 19248881 chr3L 19249036 19249073 11 192 3.5 3.5 3.5 2.4 229 chr3L 19248844 intergenic not near genes chr3L 19248958 intergenic not near genes chr3L 19249073 intergenic not near genes chr3L_11_19245001 chr3L_19245001 RAL-892 1663 chr3L 19253794 19253842 chr3L 19253891 19253939 17 97 4.0 5.0 4.5 3.1 145 chr3L 19253794 3` UTR mRpL21 - chr3L 19253866 3` UTR mRpL21 - chr3L 19253939 3` UTR mRpL21 - chr3L_17_19250001 chr3L_19250001 RAL-892 1664 chr3L 19269798 19269843 chr3L 19270022 19270067 14 215 1.5 1.0 1.2 6.4 269 chr3L 19269798 intron,exon CG14085 +,CG14088 - chr3L 19269932 intron,exon CG14085 +,CG14088 - chr3L 19270067 intron,exon CG14085 +,CG14088 - chr3L_14_19265001 chr3L_19265001 RAL-892 1665 chr3L 19342747 19342774 chr3L 19342858 19342885 11 111 5.0 4.5 4.8 1.9 138 chr3L 19342747 3` UTR CG32206 - chr3L 19342816 3` UTR CG32206 - chr3L 19342885 3` UTR CG32206 - chr3L_11_19340001 chr3L_19340001 RAL-892 1666 chr3L 19365920 19365928 chr3L 19366036 19366045 5 117 0.0 4.0 2.0 1.7 125 chr3L 19365920 intron CG32206 - chr3L 19365982 intron CG32206 - chr3L 19366045 intron CG32206 - chr3L_5_19365001 chr3L_19365001 RAL-892 1667 chr3L 19369822 19369867 chr3L 19369924 19369967 11 101 5.0 8.0 6.5 1.5 145 chr3L 19369822 intron CG32206 - chr3L 19369894 intron CG32206 - chr3L 19369967 intron CG32206 - chr3L_11_19365001 chr3L_19365001 RAL-892 1668 chr3L 19378269 19378311 chr3L 19378677 19378714 8 407 6.5 5.0 5.8 1.2 445 chr3L 19378269 intron CG32206 - chr3L 19378492 intron CG32206 - chr3L 19378714 intron CG32206 - chr3L_8_19375001 chr3L_19375001 RAL-892 1669 chr3L 19426747 19426780 chr3L 19426823 19426848 9 86 4.5 3.5 4.0 1.8 101 chr3L 19426747 intergenic not near genes chr3L 19426798 intergenic not near genes chr3L 19426848 intergenic not near genes chr3L_9_19425001 chr3L_19425001 RAL-892 1670 chr3L 19430377 19430431 chr3L 19430475 19430529 15 95 4.5 4.5 4.5 2.7 152 chr3L 19430377 intergenic not near genes chr3L 19430453 intergenic not near genes chr3L 19430529 intergenic not near genes chr3L_15_19430001 chr3L_19430001 RAL-892 1671 chr3L 19488480 19488499 chr3L 19488581 19488601 8 100 7.5 4.5 6.0 1.1 121 chr3L 19488480 intergenic pncr009:3L -,CG32212 + chr3L 19488540 intergenic pncr009:3L -,CG32212 + chr3L 19488601 intergenic pncr009:3L -,CG32212 + chr3L_8_19485001 chr3L_19485001 RAL-892 1672 chr3L 19527906 19527957 chr3L 19528005 19528035 18 98 3.0 6.5 4.8 3.1 129 chr3L 19527906 intergenic not near genes chr3L 19527970 intergenic not near genes chr3L 19528035 intergenic not near genes chr3L_18_19525001 chr3L_19525001 RAL-892 1673 chr3L 19544215 19544261 chr3L 19544311 19544357 9 96 4.5 2.5 3.5 2.0 142 chr3L 19544215 intergenic CG9279 -,l(3)76BDr - chr3L 19544286 intergenic l(3)76BDr -,CG9279 - chr3L 19544357 3` UTR l(3)76BDr - chr3L_9_19540001 chr3L_19540001 RAL-892 1674 chr3L 19564942 19564988 chr3L 19565056 19565102 18 113 6.0 2.0 4.0 3.6 160 chr3L 19564942 intergenic mir-9a + chr3L 19565022 intergenic mir-9a + chr3L 19565102 intergenic mir-9a + chr3L_18_19565001 chr3L_19565001 RAL-892 1675 chr3L 19820278 19820318 chr3L 19827847 19827887 412 18 7569 2.0 5.0 3.5 4.0 7609 chr3L 19820278 intron Deaf1 + chr3L 19824082 intron Deaf1 + chr3L 19827887 intron Deaf1 + chr3L_18_19820001 chr3L_19820001 RAL-892 1676 chr3L 19848487 19848532 chr3L 19857697 19857742 roo 16 9206 7.0 4.0 5.5 2.5 9255 chr3L 19848487 intron Papss + chr3L 19853114 intron Papss + chr3L 19857742 intron Papss + chr3L_16_19850001 chr3L_19850001 RAL-892 1677 chr3L 19861810 19861853 chr3L 19863618 19863661 S-element 16 1805 9.0 1.5 5.2 2.6 1851 chr3L 19861810 5` UTR CR45433 + chr3L 19862736 intergenic not near genes chr3L 19863661 intergenic not near genes chr3L_16_19860001 chr3L_19860001 RAL-892 1678 chr3L 19899061 19899107 chr3L 19899310 19899318 6 242 7.0 6.0 6.5 0.8 257 chr3L 19899061 intron,intron Mi-2 -,Su(Tpl) - chr3L 19899190 intron,intron Mi-2 -,Su(Tpl) - chr3L 19899318 intron,intron Mi-2 -,Su(Tpl) - chr3L_6_19895001 chr3L_19895001 RAL-892 1679 chr3L 20096079 20096116 chr3L 20096197 20096235 4 115 1.5 0.0 0.8 2.2 156 chr3L 20096079 intergenic not near genes chr3L 20096157 intergenic not near genes chr3L 20096235 intergenic not near genes chr3L_4_20095001 chr3L_20095001 RAL-892 1680 chr3L 20113456 20113505 chr3L 20113569 20113620 26 115 6.0 5.5 5.8 3.8 164 chr3L 20113456 intergenic not near genes chr3L 20113538 intergenic not near genes chr3L 20113620 intergenic not near genes chr3L_26_20110001 chr3L_20110001 RAL-892 1681 chr3L 20113660 20113688 chr3L 20122921 20122965 roo 11 9275 8.0 6.5 7.2 1.3 9305 chr3L 20113660 intergenic not near genes chr3L 20118312 intergenic not near genes chr3L 20122965 intergenic not near genes chr3L_11_20115001 chr3L_20115001 RAL-892 1682 chr3L 20143060 20143111 chr3L 20143159 20143211 19 99 3.0 3.5 3.2 4.5 151 chr3L 20143060 intergenic not near genes chr3L 20143136 intergenic not near genes chr3L 20143211 intergenic not near genes chr3L_19_20140001 chr3L_20140001 RAL-892 1683 chr3L 20148270 20148317 chr3L 20148380 20148427 11 108 2.0 5.0 3.5 2.4 157 chr3L 20148270 intergenic not near genes chr3L 20148348 intergenic not near genes chr3L 20148427 intergenic not near genes chr3L_11_20145001 chr3L_20145001 RAL-892 1684 chr3L 20157945 20157996 chr3L 20158063 20158114 19 118 3.0 4.5 3.8 4.0 169 chr3L 20157945 intron CG42674 - chr3L 20158030 intron CG42674 - chr3L 20158114 intron CG42674 - chr3L_19_20155001 chr3L_20155001 RAL-892 1685 chr3L 20249616 20249651 chr3L 20249713 20249746 14 96 5.0 3.5 4.2 2.7 130 chr3L 20249616 intron rdgC + chr3L 20249681 intron rdgC + chr3L 20249746 intron rdgC + chr3L_14_20245001 chr3L_20245001 RAL-892 1686 chr3L 20251121 20251171 chr3L 20251228 20251270 15 103 2.5 4.5 3.5 3.3 149 chr3L 20251121 intron rdgC + chr3L 20251196 intron rdgC + chr3L 20251270 intron rdgC + chr3L_15_20250001 chr3L_20250001 RAL-892 1687 chr3L 20257325 20257358 chr3L 20258455 20258498 pogo 7 1139 6.0 3.5 4.8 1.2 1173 chr3L 20257325 intron rdgC + chr3L 20257912 intron rdgC + chr3L 20258498 intron rdgC + chr3L_7_20255001 chr3L_20255001 RAL-892 1688 chr3L 20283664 20283705 chr3L 20283767 20283809 14 100 4.0 9.0 6.5 1.9 145 chr3L 20283664 intron gogo - chr3L 20283736 intron gogo - chr3L 20283809 intron gogo - chr3L_14_20280001 chr3L_20280001 RAL-892 1689 chr3L 20354358 20354405 chr3L 20354603 20354650 20 244 2.0 6.0 4.0 4.0 292 chr3L 20354358 5` UTR CG5618 + chr3L 20354504 intron CG5618 + chr3L 20354650 intron CG5618 + chr3L_20_20350001 chr3L_20350001 RAL-892 1690 chr3L 20386922 20386971 chr3L 20387044 20387093 14 122 3.5 3.0 3.2 3.3 171 chr3L 20386922 intron fbl + chr3L 20387008 intron fbl + chr3L 20387093 intron fbl + chr3L_14_20385001 chr3L_20385001 RAL-892 1691 chr3L 20403560 20403596 chr3L 20403675 20403711 16 114 6.0 6.5 6.2 2.2 151 chr3L 20403560 intergenic not near genes chr3L 20403636 intergenic not near genes chr3L 20403711 intergenic not near genes chr3L_16_20400001 chr3L_20400001 RAL-892 1692 chr3L 20431576 20431616 chr3L 20431748 20431789 12 173 2.5 5.0 3.8 2.5 213 chr3L 20431576 exon Las - chr3L 20431682 intron Las - chr3L 20431789 intron Las - chr3L_12_20430001 chr3L_20430001 RAL-892 1693 chr3L 20476735 20476774 chr3L 20484354 20484393 springer 15 7619 6.5 7.0 6.8 1.9 7658 chr3L 20476735 3` UTR isoQC + chr3L 20480564 intergenic not near genes chr3L 20484393 3` UTR ZnT77C - chr3L_15_20480001 chr3L_20480001 RAL-892 1694 chr3L 20553110 20553156 chr3L 20553217 20553263 11 106 0.5 2.5 1.5 4.4 153 chr3L 20553110 intergenic not near genes chr3L 20553186 intergenic not near genes chr3L 20553263 intergenic not near genes chr3L_11_20550001 chr3L_20550001 RAL-892 1695 chr3L 20616134 20616173 chr3L 20616356 20616395 13 221 0.0 1.0 0.5 8.7 261 chr3L 20616134 intron knrl - chr3L 20616264 intron knrl - chr3L 20616395 intron knrl - chr3L_13_20615001 chr3L_20615001 RAL-892 1696 chr3L 20752607 20752648 chr3L 20755539 20755580 15 2932 2.5 4.5 3.5 3.3 2973 chr3L 20752607 intergenic not near genes chr3L 20754094 intergenic not near genes chr3L 20755580 intron CG33912 - chr3L_15_20750001 chr3L_20750001 RAL-892 1697 chr3L 20821278 20821310 chr3L 20824767 20824799 NOF 10 3488 2.0 6.0 4.0 2.0 3521 chr3L 20821278 intron Pka-R1 + chr3L 20823038 intron Pka-R1 + chr3L 20824799 intron Pka-R1 + chr3L_10_20820001 chr3L_20820001 RAL-892 1698 chr3L 20849253 20849301 chr3L 20849351 20849400 14 99 3.0 3.5 3.2 3.3 147 chr3L 20849253 intron CG32432 - chr3L 20849326 intron CG32432 - chr3L 20849400 intron CG32432 - chr3L_14_20845001 chr3L_20845001 RAL-892 1699 chr3L 20858053 20858102 chr3L 20858172 20858221 14 117 4.5 4.5 4.5 2.5 168 chr3L 20858053 intron CG32432 - chr3L 20858137 intron CG32432 - chr3L 20858221 intron CG32432 - chr3L_14_20855001 chr3L_20855001 RAL-892 1700 chr3L 20907852 20907892 chr3L 20907954 20907995 9 101 3.5 5.5 4.5 1.6 143 chr3L 20907852 intergenic not near genes chr3L 20907924 intergenic not near genes chr3L 20907995 intergenic not near genes chr3L_9_20905001 chr3L_20905001 RAL-892 1701 chr3L 20931799 20931826 chr3L 20931906 20931933 4 107 2.0 4.5 3.2 1.0 134 chr3L 20931799 intron fng - chr3L 20931866 intron fng - chr3L 20931933 intron fng - chr3L_4_20930001 chr3L_20930001 RAL-892 1702 chr3L 20939291 20939335 chr3L 20939392 20939436 10 100 4.5 2.0 3.2 2.4 145 chr3L 20939291 intron fng - chr3L 20939364 intron fng - chr3L 20939436 intron fng - chr3L_10_20935001 chr3L_20935001 RAL-892 1703 chr3L 21082188 21082236 chr3L 21082286 21082334 14 97 2.5 4.0 3.2 3.3 146 chr3L 21082188 intron ko - chr3L 21082261 intron ko - chr3L 21082334 intron ko - chr3L_14_21080001 chr3L_21080001 RAL-892 1704 chr3L 21150925 21150961 chr3L 21151076 21151117 14 155 2.5 7.0 4.8 2.4 192 chr3L 21150925 intron Ac78C - chr3L 21151021 intron Ac78C - chr3L 21151117 intron Ac78C - chr3L_14_21150001 chr3L_21150001 RAL-892 1705 chr3L 21151845 21151897 chr3L 21156949 21157001 flea 20 5104 6.0 3.5 4.8 3.4 5156 chr3L 21151845 intron Ac78C - chr3L 21154423 intron Ac78C - chr3L 21157001 intron Ac78C - chr3L_20_21150001 chr3L_21150001 RAL-892 1706 chr3L 21160952 21160995 chr3L 21161068 21161104 7 111 2.0 7.0 4.5 1.3 152 chr3L 21160952 5` UTR Ac78C - chr3L 21161028 intron Ac78C - chr3L 21161104 intron Ac78C - chr3L_7_21160001 chr3L_21160001 RAL-892 1707 chr3L 21170033 21170085 chr3L 21170279 21170331 6 236 2.5 3.5 3.0 1.5 298 chr3L 21170033 intron Ac78C - chr3L 21170182 intron Ac78C - chr3L 21170331 intron Ac78C - chr3L_6_21170001 chr3L_21170001 RAL-892 1708 chr3L 21256521 21256565 chr3L 21256630 21256654 8 107 1.5 4.0 2.8 2.1 133 chr3L 21256521 intron Eip78C + chr3L 21256588 intron Eip78C + chr3L 21256654 intron Eip78C + chr3L_8_21255001 chr3L_21255001 RAL-892 1709 chr3L 21306131 21306150 chr3L 21315310 21315329 roo 8 9179 6.5 5.0 5.8 1.2 9198 chr3L 21306131 3` UTR CG7632 + chr3L 21310730 intron Pc - chr3L 21315329 3` UTR Pc - chr3L_8_21310001 chr3L_21310001 RAL-892 1710 chr3L 21306158 21306179 chr3L 21315305 21315358 roo 8 9175 3.5 4.0 3.8 1.7 9200 chr3L 21306158 3` UTR,3` UTR CG7632 +,Pc - chr3L 21310758 intron Pc - chr3L 21315358 3` UTR Pc - chr3L_8_21310001 chr3L_21310001 RAL-892 1711 chr3L 21319514 21319556 chr3L 21319619 21319666 15 108 2.5 4.5 3.5 3.3 152 chr3L 21319514 5` UTR Rab26 + chr3L 21319590 5` UTR Rab26 + chr3L 21319666 5` UTR Rab26 + chr3L_15_21315001 chr3L_21315001 RAL-892 1712 chr3L 21372704 21372724 chr3L 21379232 21379252 McClintock 11 6528 7.5 2.5 5.0 1.8 6548 chr3L 21372704 intergenic not near genes chr3L 21375978 intergenic not near genes chr3L 21379252 intergenic not near genes chr3L_11_21375001 chr3L_21375001 RAL-892 1713 chr3L 21408442 21408490 chr3L 21408540 21408587 14 94 1.0 5.5 3.2 3.3 145 chr3L 21408442 intron rgn + chr3L 21408514 intron rgn + chr3L 21408587 intron rgn + chr3L_14_21405001 chr3L_21405001 RAL-892 1714 chr3L 21414518 21414544 chr3L 21414614 21414639 5 95 2.0 2.5 2.2 1.6 121 chr3L 21414518 intron rgn + chr3L 21414578 intron rgn + chr3L 21414639 intron rgn + chr3L_5_21410001 chr3L_21410001 RAL-892 1715 chr3L 4341331 4341336 chr3L 21448026 21448026 12 17106693 15.5 16.5 16.0 0.7 17106695 chr3L 4341331 intron Cip4 - chr3L 12894678 3` UTR CG14118 + chr3L 21448026 3` UTR Syx7 + chr3L_12_12890001 chr3L_12890001 RAL-892 1716 chr3L 7201270 7201270 chr3L 21448026 21448026 4 14246756 6.5 16.5 11.5 0.3 14246756 chr3L 7201270 intergenic not near genes chr3L 14324648 intron,intron fz +,CR45025 - chr3L 21448026 3` UTR Syx7 + chr3L_4_14320001 chr3L_14320001 RAL-892 1717 chr3L 16736388 16736393 chr3L 21448026 21448026 9 4711635 1.5 16.5 9.0 0.9 4711638 chr3L 16736388 intron CG9701 + chr3L 19092207 intergenic MESR6 + chr3L 21448026 3` UTR Syx7 + chr3L_9_19090001 chr3L_19090001 RAL-892 1718 chr3L 4341332 4341333 chr3L 21448027 21448027 9 17106695 15.0 16.5 15.8 0.5 17106695 chr3L 4341332 intron Cip4 - chr3L 12894680 3` UTR CG14118 + chr3L 21448027 3` UTR Syx7 + chr3L_9_12890001 chr3L_12890001 RAL-892 1719 chr3L 16736388 16736393 chr3L 21448027 21448027 5 4711636 1.5 16.5 9.0 0.5 4711639 chr3L 16736388 intron CG9701 + chr3L 19092208 intergenic MESR6 + chr3L 21448027 3` UTR Syx7 + chr3L_5_19090001 chr3L_19090001 RAL-892 1720 chr3L 21769039 21769083 chr3L 21769146 21769190 9 106 4.0 3.5 3.8 1.9 151 chr3L 21769039 intron,intron Syn1 -,CG42689 + chr3L 21769114 intron,intron Syn1 -,CG42689 + chr3L 21769190 intron,intron Syn1 -,CG42689 + chr3L_9_21765001 chr3L_21765001 RAL-892 1721 chr3L 21776664 21776701 chr3L 21776771 21776808 8 107 1.0 3.0 2.0 2.7 144 chr3L 21776664 intron,intron CG42689 +,CG42552 + chr3L 21776736 intron,intron CG42689 +,CG42552 + chr3L 21776808 intron,intron CG42689 +,CG42552 + chr3L_8_21775001 chr3L_21775001 RAL-892 1722 chr3L 21836710 21836758 chr3L 21836815 21836864 23 103 4.5 5.5 5.0 3.8 154 chr3L 21836710 3` UTR P5CDh1 - chr3L 21836787 3` UTR P5CDh1 - chr3L 21836864 3` UTR P5CDh1 - chr3L_23_21835001 chr3L_21835001 RAL-892 1723 chr3L 21849485 21849531 chr3L 21849587 21849633 19 102 3.5 4.5 4.0 3.8 148 chr3L 21849485 intron mub + chr3L 21849559 intron mub + chr3L 21849633 intron mub + chr3L_19_21845001 chr3L_21845001 RAL-892 1724 chr3L 21852264 21852275 chr3L 21852360 21852388 6 104 4.0 5.0 4.5 1.1 124 chr3L 21852264 intron mub + chr3L 21852326 intron mub + chr3L 21852388 intron mub + chr3L_6_21850001 chr3L_21850001 RAL-892 1725 chr3L 21874987 21875027 chr3L 21875164 21875203 18 177 1.5 7.5 4.5 3.3 216 chr3L 21874987 intron mub + chr3L 21875095 intron mub + chr3L 21875203 intron mub + chr3L_18_21875001 chr3L_21875001 RAL-892 1726 chr3L 21901013 21901045 chr3L 21901118 21901138 8 106 2.5 8.5 5.5 1.2 125 chr3L 21901013 intron mub + chr3L 21901076 intron mub + chr3L 21901138 intron mub + chr3L_8_21900001 chr3L_21900001 RAL-892 1727 chr3L 21952441 21952481 chr3L 21953195 21953244 transib1 16 760 3.0 3.0 3.0 4.0 803 chr3L 21952441 intergenic not near genes chr3L 21952842 intergenic not near genes chr3L 21953244 intergenic not near genes chr3L_16_21950001 chr3L_21950001 RAL-892 1728 chr3L 22016361 22016400 chr3L 22016495 22016514 7 126 5.5 7.5 6.5 0.9 153 chr3L 22016361 intergenic not near genes chr3L 22016438 intergenic not near genes chr3L 22016514 intergenic not near genes chr3L_7_22015001 chr3L_22015001 RAL-892 1729 chr3L 22033675 22033716 chr3L 22033768 22033814 12 96 4.0 3.0 3.5 2.7 139 chr3L 22033675 intergenic not near genes chr3L 22033744 intergenic not near genes chr3L 22033814 intergenic not near genes chr3L_12_22030001 chr3L_22030001 RAL-892 1730 chr3L 22046169 22046208 chr3L 22046292 22046330 11 121 7.0 7.0 7.0 1.4 161 chr3L 22046169 intron Oct-TyrR + chr3L 22046250 intron Oct-TyrR + chr3L 22046330 intron Oct-TyrR + chr3L_11_22045001 chr3L_22045001 RAL-892 1731 chr3L 22099658 22099704 chr3L 22105863 22105910 3S18 16 6205 7.0 5.5 6.2 2.2 6252 chr3L 22099658 intergenic not near genes chr3L 22102784 intergenic not near genes chr3L 22105910 intergenic not near genes chr3L_16_22100001 chr3L_22100001 RAL-892 1732 chr3L 22124930 22124978 chr3L 22125106 22125131 17 174 5.5 7.0 6.2 2.4 201 chr3L 22124930 intergenic not near genes chr3L 22125030 intergenic not near genes chr3L 22125131 intergenic not near genes chr3L_17_22125001 chr3L_22125001 RAL-892 1733 chr3L 22130481 22130519 chr3L 22130647 22130685 14 166 4.0 5.5 4.8 2.4 204 chr3L 22130481 intergenic not near genes chr3L 22130583 intergenic not near genes chr3L 22130685 intergenic not near genes chr3L_14_22130001 chr3L_22130001 RAL-892 1734 chr3L 22447177 22447230 chr3L 22447288 22447341 21 110 2.0 3.5 2.8 5.5 164 chr3L 22447177 intergenic not near genes chr3L 22447259 intergenic not near genes chr3L 22447341 intergenic not near genes chr3L_21_22445001 chr3L_22445001 RAL-892 1735 chr3L 22543060 22543093 chr3L 22543157 22543190 14 97 5.5 4.5 5.0 2.3 130 chr3L 22543060 intergenic not near genes chr3L 22543125 intergenic not near genes chr3L 22543190 intergenic not near genes chr3L_14_22540001 chr3L_22540001 RAL-892 1736 chr3L 22555749 22555798 chr3L 22563239 22563284 blood 7 7489 5.0 3.5 4.2 1.3 7535 chr3L 22555749 intergenic not near genes chr3L 22559516 intergenic not near genes chr3L 22563284 intergenic not near genes chr3L_7_22555001 chr3L_22555001 RAL-892 1737 chr3L 22577602 22577647 chr3L 22582410 22582444 Doc 8 4799 1.0 1.5 1.2 3.6 4842 chr3L 22577602 intergenic not near genes chr3L 22580023 intergenic not near genes chr3L 22582444 3` UTR CG14459 - chr3L_8_22580001 chr3L_22580001 RAL-892 1738 chr3L 22617181 22617220 chr3L 22624648 22624691 blood 12 7468 6.0 5.5 5.8 1.8 7510 chr3L 22617181 intron CG14459 - chr3L 22620936 intron CG14459 - chr3L 22624691 intron CG14459 - chr3L_12_22620001 chr3L_22620001 RAL-892 1739 chr3L 22761370 22761416 chr3L 22766824 22766849 Ivk 12 5452 5.5 3.0 4.2 2.3 5479 chr3L 22761370 intron SPoCk + chr3L 22764110 intron SPoCk + chr3L 22766849 intron SPoCk + chr3L_12_22760001 chr3L_22760001 RAL-892 1740 chr3L 22848687 22848737 chr3L 22848797 22848847 23 110 4.5 4.5 4.5 4.2 160 chr3L 22848687 intergenic not near genes chr3L 22848767 intergenic not near genes chr3L 22848847 intergenic not near genes chr3L_23_22845001 chr3L_22845001 RAL-892 1741 chr3L 22865966 22866001 chr3L 22867119 22867123 Doc 17 1151 5.0 6.5 5.8 2.5 1157 chr3L 22865966 intron CG33170 + chr3L 22866544 intron CG33170 + chr3L 22867123 intron CG33170 + chr3L_17_22865001 chr3L_22865001 RAL-892 1742 chr3L 22885899 22885948 chr3L 22885992 22886027 12 92 6.0 3.0 4.5 2.2 128 chr3L 22885899 intron slif + chr3L 22885963 intron slif + chr3L 22886027 intron slif + chr3L_12_22885001 chr3L_22885001 RAL-892 1743 chr3L 22901215 22901265 chr3L 22901655 22901705 14 440 5.5 3.0 4.2 2.7 490 chr3L 22901215 intergenic not near genes chr3L 22901460 intergenic BoYb + chr3L 22901705 intergenic BoYb + chr3L_14_22900001 chr3L_22900001 RAL-892 1744 chr3L 19220633 19220637 chr3L 22908066 22908066 4 3687430 16.5 18.5 17.5 0.2 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_4_21060001 chr3L_21060001 RAL-892 1745 chr3L 22912746 22912798 chr3L 22912847 22912899 21 100 2.0 5.0 3.5 4.7 153 chr3L 22912746 intron CG12768 + chr3L 22912822 intron CG12768 + chr3L 22912899 intron CG12768 + chr3L_21_22910001 chr3L_22910001 RAL-892 1746 chr3L 22915149 22915190 chr3L 22915276 22915317 18 127 2.5 6.0 4.2 3.5 168 chr3L 22915149 intron CG12768 + chr3L 22915233 intron CG12768 + chr3L 22915317 intron CG12768 + chr3L_18_22915001 chr3L_22915001 RAL-892 1747 chr3L 22920916 22920960 chr3L 22921024 22921068 9 106 3.0 1.5 2.2 2.8 152 chr3L 22920916 intron CG12768 + chr3L 22920992 intron CG12768 + chr3L 22921068 intron CG12768 + chr3L_9_22920001 chr3L_22920001 RAL-892 1748 chr3L 22943692 22943744 chr3L 22943918 22943970 14 224 3.0 4.0 3.5 3.1 278 chr3L 22943692 intergenic not near genes chr3L 22943831 intergenic not near genes chr3L 22943970 intergenic not near genes chr3L_14_22940001 chr3L_22940001 RAL-892 1749 chr3L 22989866 22989890 chr3L 22996837 22996883 297 11 6989 2.0 6.5 4.2 2.1 7017 chr3L 22989866 intergenic not near genes chr3L 22993374 intergenic not near genes chr3L 22996883 intergenic not near genes chr3L_11_22990001 chr3L_22990001 RAL-892 1750 chr3L 23042204 23042255 chr3L 23048976 23049028 gypsy6 19 6767 3.0 4.5 3.8 4.0 6824 chr3L 23042204 intergenic not near genes chr3L 23045616 intergenic not near genes chr3L 23049028 intergenic not near genes chr3L_19_23045001 chr3L_23045001 RAL-892 1751 chr3L 23088283 23088303 chr3L 23088378 23088405 7 101 2.5 5.0 3.8 1.5 122 chr3L 23088283 intergenic not near genes chr3L 23088344 intergenic not near genes chr3L 23088405 intergenic not near genes chr3L_7_23085001 chr3L_23085001 RAL-892 1752 chr3L 23205427 23205453 chr3L 23205677 23205693 5 247 10.0 6.0 8.0 0.6 266 chr3L 23205427 intergenic not near genes chr3L 23205560 intergenic not near genes chr3L 23205693 intergenic not near genes chr3L_5_23205001 chr3L_23205001 RAL-892 1753 chr3L 23347876 23347919 chr3L 23347985 23348029 16 109 2.0 3.5 2.8 4.2 153 chr3L 23347876 intergenic not near genes chr3L 23347952 intergenic not near genes chr3L 23348029 intergenic not near genes chr3L_16_23345001 chr3L_23345001 RAL-892 1754 chr3L 23815316 23815330 chr3L 23815424 23815424 5 105 2.0 13.0 7.5 0.6 108 chr3L 23815316 intergenic not near genes chr3L 23815370 intergenic not near genes chr3L 23815424 intergenic not near genes chr3L_5_23815001 chr3L_23815001 RAL-892 1755 chr3L 24012397 24012436 chr3L 24020756 24020797 roo 8 8361 2.0 5.0 3.5 1.8 8400 chr3L 24012397 intergenic not near genes chr3L 24016597 intergenic not near genes chr3L 24020797 intergenic not near genes chr3L_8_24015001 chr3L_24015001 RAL-892 1756 chr3L 24791893 24791909 chr3L 24796692 24796698 Doc 5 4797 5.0 6.0 5.5 0.8 4805 chr3L 24791893 intergenic not near genes chr3L 24794296 intergenic not near genes chr3L 24796698 intergenic not near genes chr3L_5_24790001 chr3L_24790001 RAL-892 1757 chr3L 18198930 18198930 chr3L 24821492 24821492 4 6622562 19.5 9.0 14.2 0.3 6622562 chr3L 18198930 intergenic not near genes chr3L 21510211 intron M6 + chr3L 24821492 intergenic not near genes chr3L_4_21510001 chr3L_21510001 RAL-892 1758 chr3L 18198931 18198931 chr3L 24821493 24821493 4 6622562 20.0 9.0 14.5 0.3 6622562 chr3L 18198931 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821493 intergenic not near genes chr3L_4_21510001 chr3L_21510001 RAL-892 1759 chr3L 25331624 25331645 chr3L 25331726 25331731 4 98 3.0 1.0 2.0 1.3 107 chr3L 25331624 intergenic not near genes chr3L 25331678 intergenic not near genes chr3L 25331731 intergenic not near genes chr3L_4_25330001 chr3L_25330001 RAL-892 1760 chr3L 25502176 25502200 chr3L 25502299 25502323 4 123 16.0 14.5 15.2 0.2 147 chr3L 25502176 intron CG41343 - chr3L 25502250 intron CG41343 - chr3L 25502323 intron CG41343 - chr3L_4_25500001 chr3L_25500001 RAL-892 1761 chr3L 26010803 26010854 chr3L 26010907 26010933 15 102 5.5 5.0 5.2 2.4 130 chr3L 26010803 intron CG40178 - chr3L 26010868 intron CG40178 - chr3L 26010933 intron CG40178 - chr3L_15_26010001 chr3L_26010001 RAL-892 1762 chr3L 27383172 27383206 chr3L 27383335 27383371 5 164 23.0 18.0 20.5 0.2 199 chr3L 27383172 intron Dbp80 + chr3L 27383272 intron Dbp80 + chr3L 27383371 intron Dbp80 + chr3L_5_27380001 chr3L_27380001 RAL-892 1763 chr3L 27390439 27390705 chr3L 27390680 27390797 9 110 22.0 23.0 22.5 0.4 358 chr3L 27390439 intron Dbp80 + chr3L 27390618 intron Dbp80 + chr3L 27390797 intron Dbp80 + chr3L_9_27390001 chr3L_27390001 RAL-892 1764 chr3R 97111 97112 chr3R 99847 99849 4 2736 0.0 0.0 0.0 4.0 2738 chr3R 97111 intergenic not near genes chr3R 98480 intergenic not near genes chr3R 99849 intergenic not near genes chr3R_4_95001 chr3R_95001 RAL-892 1765 chr3R 2556881 2556930 chr3R 2557598 2557643 14 714 23.0 20.0 21.5 0.6 762 chr3R 2556881 intron CG41056 - chr3R 2557262 intron CG41056 - chr3R 2557643 intron CG41056 - chr3R_14_2555001 chr3R_2555001 RAL-892 1766 chr3R 4105029 4105066 chr3R 4110253 4110289 copia 4 5223 5.0 5.5 5.2 0.6 5260 chr3R 4105029 intergenic not near genes chr3R 4107659 intergenic not near genes chr3R 4110289 intergenic not near genes chr3R_4_4105001 chr3R_4105001 RAL-892 1767 chr3R 4132880 4132913 chr3R 4133054 4133087 8 174 5.0 1.5 3.2 1.9 207 chr3R 4132880 intron Gfat1 + chr3R 4132984 intron Gfat1 + chr3R 4133087 intron Gfat1 + chr3R_8_4130001 chr3R_4130001 RAL-892 1768 chr3R 4206049 4206098 chr3R 4211644 4211693 mdg3 18 5594 4.5 5.0 4.8 3.1 5644 chr3R 4206049 intron CG14636 - chr3R 4208871 intron CG14636 - chr3R 4211693 intron CG14636 - chr3R_18_4205001 chr3R_4205001 RAL-892 1769 chr3R 4366743 4366788 chr3R 4375139 4375191 roo 19 8402 6.0 8.0 7.0 2.4 8448 chr3R 4366743 3` UTR CG1090 + chr3R 4370967 intergenic not near genes chr3R 4375191 5` UTR CR44922 + chr3R_19_4370001 chr3R_4370001 RAL-892 1770 chr3R 4408393 4408431 chr3R 4412717 4412755 Juan 13 4324 7.5 8.0 7.8 1.5 4362 chr3R 4408393 intron CG32944 - chr3R 4410574 intron CG32944 - chr3R 4412755 intron CG32944 - chr3R_13_4410001 chr3R_4410001 RAL-892 1771 chr3R 4609528 4609578 chr3R 4610712 4610753 1360 18 1182 8.0 6.5 7.2 2.2 1225 chr3R 4609528 intergenic not near genes chr3R 4610140 intergenic not near genes chr3R 4610753 intergenic not near genes chr3R_18_4610001 chr3R_4610001 RAL-892 1772 chr3R 4722325 4722375 chr3R 4722479 4722515 20 154 3.0 4.0 3.5 4.4 190 chr3R 4722325 intron Nep2 - chr3R 4722420 intron Nep2 - chr3R 4722515 intron Nep2 - chr3R_20_4720001 chr3R_4720001 RAL-892 1773 chr3R 4739096 4739146 chr3R 4739193 4739241 16 96 4.5 5.5 5.0 2.7 145 chr3R 4739096 intron tacc - chr3R 4739168 intron tacc - chr3R 4739241 intron tacc - chr3R_16_4735001 chr3R_4735001 RAL-892 1774 chr3R 4769140 4769191 chr3R 4769237 4769289 15 97 5.5 2.0 3.8 3.1 149 chr3R 4769140 intron,intron atms +,CG44098 - chr3R 4769214 intron,intron atms +,CG44098 - chr3R 4769289 intron,intron atms +,CG44098 - chr3R_15_4765001 chr3R_4765001 RAL-892 1775 chr3R 4887465 4887506 chr3R 4894857 4894903 rover 8 7391 6.5 3.0 4.8 1.4 7438 chr3R 4887465 intergenic not near genes chr3R 4891184 intergenic not near genes chr3R 4894903 intergenic not near genes chr3R_8_4890001 chr3R_4890001 RAL-892 1776 chr3R 4975920 4975964 chr3R 4976041 4976085 12 121 4.0 4.0 4.0 2.4 165 chr3R 4975920 intergenic not near genes chr3R 4976002 intergenic not near genes chr3R 4976085 intergenic not near genes chr3R_12_4975001 chr3R_4975001 RAL-892 1777 chr3R 5045826 5045876 chr3R 5052948 5052998 HMS-Beagle 18 7122 5.0 6.0 5.5 2.8 7172 chr3R 5045826 3` UTR CR43635 - chr3R 5049412 intergenic not near genes chr3R 5052998 intergenic CR45588 - chr3R_18_5045001 chr3R_5045001 RAL-892 1778 chr3R 5067965 5068014 chr3R 5073502 5073551 mdg3 23 5536 4.5 6.0 5.2 3.7 5586 chr3R 5067965 intergenic not near genes chr3R 5070758 intergenic not near genes chr3R 5073551 intergenic not near genes chr3R_23_5070001 chr3R_5070001 RAL-892 1779 chr3R 5278070 5278115 chr3R 5278171 5278216 14 96 6.0 6.0 6.0 2.0 146 chr3R 5278070 intron mtd - chr3R 5278143 intron mtd - chr3R 5278216 intron mtd - chr3R_14_5275001 chr3R_5275001 RAL-892 1780 chr3R 5306132 5306159 chr3R 5306219 5306266 14 99 3.5 5.0 4.2 2.7 134 chr3R 5306132 intron mtd - chr3R 5306199 intron mtd - chr3R 5306266 intron mtd - chr3R_14_5305001 chr3R_5305001 RAL-892 1781 chr3R 5338390 5338427 chr3R 5343587 5343604 Rt1c 8 5192 6.5 3.0 4.8 1.4 5214 chr3R 5338390 intron mtd - chr3R 5340997 intron mtd - chr3R 5343604 intron mtd - chr3R_8_5340001 chr3R_5340001 RAL-892 1782 chr3R 5385959 5386004 chr3R 5386150 5386161 7 186 1.5 2.5 2.0 2.3 202 chr3R 5385959 intron kkv - chr3R 5386060 intron kkv - chr3R 5386161 intron kkv - chr3R_7_5385001 chr3R_5385001 RAL-892 1783 chr3R 5445943 5445983 chr3R 5452423 5452463 Burdock 10 6480 3.5 4.0 3.8 2.1 6520 chr3R 5445943 intron CG14669 + chr3R 5449203 intron CG14669 + chr3R 5452463 intron CG14669 + chr3R_10_5445001 chr3R_5445001 RAL-892 1784 chr3R 5627127 5627180 chr3R 5627558 5627611 18 429 2.0 6.0 4.0 3.6 484 chr3R 5627127 intergenic not near genes chr3R 5627369 intergenic CG31551 + chr3R 5627611 intergenic CG31551 + chr3R_18_5625001 chr3R_5625001 RAL-892 1785 chr3R 5726073 5726122 chr3R 5726255 5726304 11 182 5.5 3.5 4.5 2.0 231 chr3R 5726073 intergenic not near genes chr3R 5726188 intergenic not near genes chr3R 5726304 intergenic not near genes chr3R_11_5725001 chr3R_5725001 RAL-892 1786 chr3R 5745994 5746038 chr3R 5746255 5746298 pogo 13 260 5.5 4.5 5.0 2.2 304 chr3R 5745994 3` UTR Madm + chr3R 5746146 3` UTR Madm + chr3R 5746298 3` UTR Madm + chr3R_13_5745001 chr3R_5745001 RAL-892 1787 chr3R 5746994 5747044 chr3R 5753205 5753255 diver 22 6211 3.0 5.0 4.0 4.4 6261 chr3R 5746994 intergenic Madm + chr3R 5750124 intergenic not near genes chr3R 5753255 intergenic CG2091 - chr3R_22_5750001 chr3R_5750001 RAL-892 1788 chr3R 5772355 5772409 chr3R 5772533 5772587 18 178 5.0 3.5 4.2 3.5 232 chr3R 5772355 intron CG2082 - chr3R 5772471 intron CG2082 - chr3R 5772587 intron CG2082 - chr3R_18_5770001 chr3R_5770001 RAL-892 1789 chr3R 5809093 5809144 chr3R 5809354 5809405 pogo 17 261 4.5 4.5 4.5 3.1 312 chr3R 5809093 3` UTR CG11000 + chr3R 5809249 3` UTR CG11000 + chr3R 5809405 3` UTR CG11000 + chr3R_17_5805001 chr3R_5805001 RAL-892 1790 chr3R 5822364 5822393 chr3R 5823551 5823580 1360 10 1187 10.0 6.0 8.0 1.1 1216 chr3R 5822364 3` UTR CG2023 - chr3R 5822972 3` UTR CG2023 - chr3R 5823580 3` UTR CG2023 - chr3R_10_5820001 chr3R_5820001 RAL-892 1791 chr3R 5840808 5840837 chr3R 5840917 5840943 9 108 8.5 8.5 8.5 0.9 135 chr3R 5840808 intergenic CG1213 + chr3R 5840876 intergenic CG1213 + chr3R 5840943 intergenic CG1213 + chr3R_9_5840001 chr3R_5840001 RAL-892 1792 chr3R 5927542 5927588 chr3R 5927802 5927839 pogo 21 257 1.5 6.5 4.0 4.2 297 chr3R 5927542 intron CG34113 - chr3R 5927690 intron CG34113 - chr3R 5927839 intron CG34113 - chr3R_21_5925001 chr3R_5925001 RAL-892 1793 chr3R 5980738 5980766 chr3R 5980849 5980852 7 107 5.5 7.5 6.5 0.9 114 chr3R 5980738 intergenic not near genes chr3R 5980795 intergenic not near genes chr3R 5980852 intergenic not near genes chr3R_7_5980001 chr3R_5980001 RAL-892 1794 chr3R 6015972 6015994 chr3R 6024442 6024442 Tirant 4 8472 1.0 3.0 2.0 1.3 8470 chr3R 6015972 intergenic not near genes chr3R 6020207 intergenic not near genes chr3R 6024442 intergenic not near genes chr3R_4_6020001 chr3R_6020001 RAL-892 1795 chr3R 6148454 6148502 chr3R 6148572 6148620 8 115 1.0 1.0 1.0 4.0 166 chr3R 6148454 intergenic not near genes chr3R 6148537 intergenic not near genes chr3R 6148620 intergenic not near genes chr3R_8_6145001 chr3R_6145001 RAL-892 1796 chr3R 6158514 6158536 chr3R 6167090 6167139 Tirant 5 8594 7.0 4.0 5.5 0.8 8625 chr3R 6158514 intergenic not near genes chr3R 6162826 intergenic not near genes chr3R 6167139 intergenic CG1077 + chr3R_5_6160001 chr3R_6160001 RAL-892 1797 chr3R 6175154 6175205 chr3R 6182446 6182470 HMS-Beagle2 16 7287 4.0 3.0 3.5 3.6 7316 chr3R 6175154 intergenic Osi1 + chr3R 6178812 intron CR45194 + chr3R 6182470 intergenic CR45194 + chr3R_16_6175001 chr3R_6175001 RAL-892 1798 chr3R 6216983 6217030 chr3R 6217244 6217291 11 261 3.5 5.5 4.5 2.0 308 chr3R 6216983 intron Osi3 + chr3R 6217137 intron Osi3 + chr3R 6217291 intron Osi3 + chr3R_11_6215001 chr3R_6215001 RAL-892 1799 chr3R 6316777 6316811 chr3R 6316890 6316905 8 109 1.5 3.5 2.5 2.3 128 chr3R 6316777 intron Osi17 + chr3R 6316841 intron Osi17 + chr3R 6316905 intron Osi17 + chr3R_8_6315001 chr3R_6315001 RAL-892 1800 chr3R 6461559 6461609 chr3R 6461660 6461704 14 100 6.0 5.5 5.8 2.1 145 chr3R 6461559 intergenic not near genes chr3R 6461632 intergenic not near genes chr3R 6461704 intergenic not near genes chr3R_14_6460001 chr3R_6460001 RAL-892 1801 chr3R 6510015 6510047 chr3R 6515109 6515148 jockey 10 5100 9.0 6.0 7.5 1.2 5133 chr3R 6510015 intergenic not near genes chr3R 6512582 intergenic not near genes chr3R 6515148 intergenic not near genes chr3R_10_6510001 chr3R_6510001 RAL-892 1802 chr3R 6523302 6523346 chr3R 6523696 6523737 17 394 1.5 3.5 2.5 4.9 435 chr3R 6523302 intergenic not near genes chr3R 6523520 intergenic not near genes chr3R 6523737 intergenic not near genes chr3R_17_6520001 chr3R_6520001 RAL-892 1803 chr3R 6526846 6526870 chr3R 6526969 6526993 12 123 2.5 4.5 3.5 2.7 147 chr3R 6526846 intergenic not near genes chr3R 6526920 intergenic not near genes chr3R 6526993 intergenic not near genes chr3R_12_6525001 chr3R_6525001 RAL-892 1804 chr3R 6737510 6737519 chr3R 6739317 6739326 Doc 5 1807 0.0 10.5 5.2 0.8 1816 chr3R 6737510 intron pb - chr3R 6738418 intron pb - chr3R 6739326 intron pb - chr3R_5_6735001 chr3R_6735001 RAL-892 1805 chr3R 6780429 6780479 chr3R 6780532 6780582 13 103 3.0 2.0 2.5 3.7 153 chr3R 6780429 intergenic not near genes chr3R 6780506 intergenic not near genes chr3R 6780582 intergenic not near genes chr3R_13_6780001 chr3R_6780001 RAL-892 1806 chr3R 6782415 6782440 chr3R 6782514 6782539 7 99 6.0 6.0 6.0 1.0 124 chr3R 6782415 intergenic not near genes chr3R 6782477 intergenic not near genes chr3R 6782539 intergenic not near genes chr3R_7_6780001 chr3R_6780001 RAL-892 1807 chr3R 6782441 6782470 chr3R 6782513 6782559 9 94 3.0 6.0 4.5 1.6 118 chr3R 6782441 intergenic not near genes chr3R 6782500 intergenic not near genes chr3R 6782559 intergenic not near genes chr3R_9_6780001 chr3R_6780001 RAL-892 1808 chr3R 6803738 6803751 chr3R 6803834 6803846 4 96 0.0 2.5 1.2 1.8 108 chr3R 6803738 intergenic not near genes chr3R 6803792 intergenic not near genes chr3R 6803846 intergenic not near genes chr3R_4_6800001 chr3R_6800001 RAL-892 1809 chr3R 6807243 6807293 chr3R 6807345 6807389 15 102 4.5 7.0 5.8 2.2 146 chr3R 6807243 intergenic not near genes chr3R 6807316 intergenic not near genes chr3R 6807389 intergenic not near genes chr3R_15_6805001 chr3R_6805001 RAL-892 1810 chr3R 6828006 6828039 chr3R 6828102 6828135 8 96 3.0 1.5 2.2 2.5 129 chr3R 6828006 intron Scr - chr3R 6828070 intron Scr - chr3R 6828135 intron Scr - chr3R_8_6825001 chr3R_6825001 RAL-892 1811 chr3R 6856367 6856399 chr3R 6856504 6856536 12 136 4.0 4.0 4.0 2.4 169 chr3R 6856367 intergenic not near genes chr3R 6856452 intergenic not near genes chr3R 6856536 intergenic not near genes chr3R_12_6855001 chr3R_6855001 RAL-892 1812 chr3R 6862203 6862249 chr3R 6862310 6862356 20 106 3.5 7.5 5.5 3.1 153 chr3R 6862203 intergenic not near genes chr3R 6862280 intergenic not near genes chr3R 6862356 intergenic not near genes chr3R_20_6860001 chr3R_6860001 RAL-892 1813 chr3R 6891239 6891254 chr3R 6891329 6891343 7 93 2.5 8.5 5.5 1.1 104 chr3R 6891239 intergenic not near genes chr3R 6891291 intergenic not near genes chr3R 6891343 intergenic not near genes chr3R_7_6890001 chr3R_6890001 RAL-892 1814 chr3R 6923563 6923617 chr3R 6923670 6923722 11 102 2.5 3.0 2.8 2.9 159 chr3R 6923563 intron Antp - chr3R 6923642 intron Antp - chr3R 6923722 intron Antp - chr3R_11_6920001 chr3R_6920001 RAL-892 1815 chr3R 6961178 6961202 chr3R 6961270 6961301 6 96 2.5 5.5 4.0 1.2 123 chr3R 6961178 intron Antp - chr3R 6961240 intron Antp - chr3R 6961301 intron Antp - chr3R_6_6960001 chr3R_6960001 RAL-892 1816 chr3R 7012221 7012234 chr3R 7012281 7012326 4 86 3.0 3.5 3.2 1.0 105 chr3R 7012221 intergenic not near genes chr3R 7012274 intergenic not near genes chr3R 7012326 intergenic not near genes chr3R_4_7010001 chr3R_7010001 RAL-892 1817 chr3R 7092767 7092816 chr3R 7093351 7093400 15 582 2.0 2.0 2.0 5.0 633 chr3R 7092767 3` UTR CR43685 - chr3R 7093084 intron CR43685 - chr3R 7093400 3` UTR CR43685 - chr3R_15_7090001 chr3R_7090001 RAL-892 1818 chr3R 7103282 7103294 chr3R 7103362 7103390 6 91 8.5 5.5 7.0 0.8 108 chr3R 7103282 intron Alh - chr3R 7103336 intron Alh - chr3R 7103390 intron Alh - chr3R_6_7100001 chr3R_7100001 RAL-892 1819 chr3R 7103299 7103313 chr3R 7103361 7103402 12 78 4.5 5.0 4.8 2.1 103 chr3R 7103299 intron Alh - chr3R 7103350 intron Alh - chr3R 7103402 intron Alh - chr3R_12_7100001 chr3R_7100001 RAL-892 1820 chr3R 7105302 7105349 chr3R 7105404 7105445 15 100 3.5 2.0 2.8 3.9 143 chr3R 7105302 intron Alh - chr3R 7105374 intron Alh - chr3R 7105445 intron Alh - chr3R_15_7105001 chr3R_7105001 RAL-892 1821 chr3R 7126483 7126534 chr3R 7126598 7126649 14 115 5.0 4.0 4.5 2.5 166 chr3R 7126483 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126566 3` UTR CG10068 - chr3R 7126649 3` UTR CG10068 - chr3R_14_7125001 chr3R_7125001 RAL-892 1822 chr3R 7132820 7132873 chr3R 7132931 7132984 18 109 3.5 5.0 4.2 3.5 164 chr3R 7132820 intergenic CG31493 + chr3R 7132902 intergenic CG31493 + chr3R 7132984 intergenic CG31493 + chr3R_18_7130001 chr3R_7130001 RAL-892 1823 chr3R 7173659 7173703 chr3R 7173759 7173803 20 100 3.0 5.5 4.2 3.8 144 chr3R 7173659 intron sas + chr3R 7173731 intron sas + chr3R 7173803 intron sas + chr3R_20_7170001 chr3R_7170001 RAL-892 1824 chr3R 7217448 7217487 chr3R 7217689 7217728 14 241 4.5 2.0 3.2 3.3 280 chr3R 7217448 intergenic CG14605 -,CG14606 - chr3R 7217588 intergenic CG14605 - chr3R 7217728 3` UTR CG14605 - chr3R_14_7215001 chr3R_7215001 RAL-892 1825 chr3R 7269905 7269942 chr3R 7270005 7270042 15 112 5.0 3.5 4.2 2.9 137 chr3R 7269905 3` UTR Syt4 + chr3R 7269974 3` UTR Syt4 + chr3R 7270042 3` UTR Syt4 + chr3R_15_7265001 chr3R_7265001 RAL-892 1826 chr3R 7302278 7302474 chr3R 7302390 7302579 10 111 10.5 3.5 7.0 1.2 301 chr3R 7302278 intron rn - chr3R 7302428 intron rn - chr3R 7302579 intron rn - chr3R_10_7300001 chr3R_7300001 RAL-892 1827 chr3R 7404942 7404967 chr3R 7405038 7405063 5 96 0.0 6.5 3.2 1.2 121 chr3R 7404942 intergenic not near genes chr3R 7405002 intergenic not near genes chr3R 7405063 intergenic not near genes chr3R_5_7405001 chr3R_7405001 RAL-892 1828 chr3R 7481810 7481859 chr3R 7481908 7481936 8 82 5.5 1.0 3.2 1.9 126 chr3R 7481810 intergenic not near genes chr3R 7481873 intergenic not near genes chr3R 7481936 intergenic not near genes chr3R_8_7480001 chr3R_7480001 RAL-892 1829 chr3R 7501739 7501787 chr3R 7509230 7509269 11 7487 22.0 35.5 28.8 0.4 7530 chr3R 7501739 intron,exon alpha-Est9 -,CG1287 - chr3R 7505504 intergenic alpha-Est9 - chr3R 7509269 intergenic alpha-Est8 - chr3R_11_7505001 chr3R_7505001 RAL-892 1830 chr3R 7542457 7542472 chr3R 7542554 7542569 5 97 3.5 1.5 2.5 1.4 112 chr3R 7542457 intron alpha-Est2 + chr3R 7542513 intron alpha-Est2 + chr3R 7542569 intron alpha-Est2 + chr3R_5_7540001 chr3R_7540001 RAL-892 1831 chr3R 7590309 7590351 chr3R 7590407 7590449 21 97 3.0 4.0 3.5 4.7 140 chr3R 7590309 intron CG34127 - chr3R 7590379 intron CG34127 - chr3R 7590449 intron CG34127 - chr3R_21_7590001 chr3R_7590001 RAL-892 1832 chr3R 7677893 7677942 chr3R 7678026 7678075 10 128 5.5 3.5 4.5 1.8 182 chr3R 7677893 intron Nlg1 + chr3R 7677984 intron Nlg1 + chr3R 7678075 intron Nlg1 + chr3R_10_7675001 chr3R_7675001 RAL-892 1833 chr3R 7721660 7721693 chr3R 7721797 7721817 9 131 3.5 3.5 3.5 2.0 157 chr3R 7721660 intergenic not near genes chr3R 7721738 intergenic not near genes chr3R 7721817 intergenic not near genes chr3R_9_7720001 chr3R_7720001 RAL-892 1834 chr3R 7726143 7726182 chr3R 7726240 7726274 7 95 3.5 3.5 3.5 1.6 131 chr3R 7726143 intergenic not near genes chr3R 7726208 intergenic not near genes chr3R 7726274 intergenic not near genes chr3R_7_7725001 chr3R_7725001 RAL-892 1835 chr3R 7729446 7729496 chr3R 7737404 7737449 Stalker2 13 7957 5.0 5.0 5.0 2.2 8003 chr3R 7729446 intergenic not near genes chr3R 7733448 intergenic not near genes chr3R 7737449 intergenic not near genes chr3R_13_7730001 chr3R_7730001 RAL-892 1836 chr3R 7832854 7832886 chr3R 7833039 7833084 11 198 0.0 1.5 0.8 6.1 230 chr3R 7832854 intron CG34384 + chr3R 7832969 intron CG34384 + chr3R 7833084 intron CG34384 + chr3R_11_7830001 chr3R_7830001 RAL-892 1837 chr3R 7956612 7956658 chr3R 7956725 7956744 18 109 5.0 2.5 3.8 3.8 132 chr3R 7956612 intron dsx - chr3R 7956678 intron dsx - chr3R 7956744 intron dsx - chr3R_18_7955001 chr3R_7955001 RAL-892 1838 chr3R 7973299 7973343 chr3R 7974381 7974425 1360 18 1082 3.5 4.5 4.0 3.6 1126 chr3R 7973299 intergenic not near genes chr3R 7973862 intergenic not near genes chr3R 7974425 3` UTR CD98hc - chr3R_18_7970001 chr3R_7970001 RAL-892 1839 chr3R 7993180 7993220 chr3R 7993298 7993338 12 118 4.0 3.0 3.5 2.7 158 chr3R 7993180 intron CG2781 - chr3R 7993259 intron CG2781 - chr3R 7993338 intron CG2781 - chr3R_12_7990001 chr3R_7990001 RAL-892 1840 chr3R 8090545 8090565 chr3R 8094042 8094062 297 8 3497 6.0 11.5 8.8 0.8 3517 chr3R 8090545 intergenic CR44330 + chr3R 8092304 intergenic not near genes chr3R 8094062 intergenic CG7900 + chr3R_8_8090001 chr3R_8090001 RAL-892 1841 chr3R 8094391 8094436 chr3R 8099716 8099761 Transpac 21 5325 5.0 6.0 5.5 3.2 5370 chr3R 8094391 intron CG7900 + chr3R 8097076 intron CG7900 + chr3R 8099761 intron CG7900 + chr3R_21_8095001 chr3R_8095001 RAL-892 1842 chr3R 8101745 8101788 chr3R 8104849 8104892 G2 14 3102 2.0 3.0 2.5 4.0 3147 chr3R 8101745 exon CG7900 + chr3R 8103318 intron CG7900 + chr3R 8104892 3` UTR CG7900 + chr3R_14_8100001 chr3R_8100001 RAL-892 1843 chr3R 8207546 8207587 chr3R 8208408 8208417 F-element 5 848 6.0 2.0 4.0 1.0 871 chr3R 8207546 intergenic not near genes chr3R 8207982 intergenic not near genes chr3R 8208417 intergenic not near genes chr3R_5_8205001 chr3R_8205001 RAL-892 1844 chr3R 8230353 8230386 chr3R 8230449 8230482 11 102 3.5 0.5 2.0 3.7 129 chr3R 8230353 3` UTR CR45551 - chr3R 8230418 3` UTR CR45551 - chr3R 8230482 3` UTR CR45551 - chr3R_11_8230001 chr3R_8230001 RAL-892 1845 chr3R 8339246 8339247 chr3R 21907534 21907536 10 13568288 16.5 19.0 17.8 0.5 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_10_15120001 chr3R_15120001 RAL-892 1846 chr3R 8402989 8403041 chr3R 8412175 8412201 roo 12 9176 3.5 5.5 4.5 2.2 9212 chr3R 8402989 intron CG45263 - chr3R 8407595 intron CG45263 - chr3R 8412201 intron CG45263 - chr3R_12_8405001 chr3R_8405001 RAL-892 1847 chr3R 8478062 8478107 chr3R 8478161 8478207 10 97 3.5 3.5 3.5 2.2 145 chr3R 8478062 intergenic CG45263 - chr3R 8478134 intergenic not near genes chr3R 8478207 intergenic not near genes chr3R_10_8475001 chr3R_8475001 RAL-892 1848 chr3R 8515929 8515962 chr3R 8516039 8516056 5 105 1.5 2.5 2.0 1.7 127 chr3R 8515929 intergenic not near genes chr3R 8515992 intergenic not near genes chr3R 8516056 intergenic not near genes chr3R_5_8515001 chr3R_8515001 RAL-892 1849 chr3R 8570478 8570505 chr3R 8575114 8575161 HMS-Beagle 5 4652 6.5 3.5 5.0 0.8 4683 chr3R 8570478 intergenic not near genes chr3R 8572820 intergenic not near genes chr3R 8575161 intergenic not near genes chr3R_5_8570001 chr3R_8570001 RAL-892 1850 chr3R 8575909 8575958 chr3R 8576012 8576047 13 100 3.5 2.5 3.0 3.2 138 chr3R 8575909 intergenic not near genes chr3R 8575978 intergenic not near genes chr3R 8576047 intergenic not near genes chr3R_13_8575001 chr3R_8575001 RAL-892 1851 chr3R 8601757 8601793 chr3R 8610925 8610966 roo 15 9170 6.5 6.5 6.5 2.0 9209 chr3R 8601757 intron 5-HT2B + chr3R 8606362 intron 5-HT2B + chr3R 8610966 intron 5-HT2B + chr3R_15_8605001 chr3R_8605001 RAL-892 1852 chr3R 8614801 8614814 chr3R 8615006 8615037 7 215 0.0 5.5 2.8 1.8 236 chr3R 8614801 intron 5-HT2B + chr3R 8614919 intron 5-HT2B + chr3R 8615037 intron 5-HT2B + chr3R_7_8610001 chr3R_8610001 RAL-892 1853 chr3R 8685279 8685315 chr3R 8685399 8685434 15 120 5.0 5.5 5.2 2.4 155 chr3R 8685279 intron CR44937 - chr3R 8685356 intron CR44937 - chr3R 8685434 intron CR44937 - chr3R_15_8685001 chr3R_8685001 RAL-892 1854 chr3R 8689588 8689606 chr3R 8689686 8689701 7 96 6.0 2.5 4.2 1.3 113 chr3R 8689588 intergenic not near genes chr3R 8689644 intergenic not near genes chr3R 8689701 intergenic not near genes chr3R_7_8685001 chr3R_8685001 RAL-892 1855 chr3R 8689608 8689634 chr3R 8689684 8689732 10 90 1.0 2.0 1.5 4.0 124 chr3R 8689608 intergenic not near genes chr3R 8689670 intergenic not near genes chr3R 8689732 intergenic not near genes chr3R_10_8685001 chr3R_8685001 RAL-892 1856 chr3R 8707339 8707381 chr3R 8709800 8709842 jockey 12 2459 3.0 2.0 2.5 3.4 2503 chr3R 8707339 intergenic not near genes chr3R 8708590 intergenic not near genes chr3R 8709842 intergenic not near genes chr3R_12_8705001 chr3R_8705001 RAL-892 1857 chr3R 8733073 8733096 chr3R 8733472 8733480 5 395 6.5 2.0 4.2 1.0 407 chr3R 8733073 exon CG8202 + chr3R 8733276 exon CG8202 + chr3R 8733480 intron CG8202 + chr3R_5_8730001 chr3R_8730001 RAL-892 1858 chr3R 8740243 8740275 chr3R 8740352 8740364 8 101 3.5 8.0 5.8 1.2 121 chr3R 8740243 intron CG9801 - chr3R 8740304 intron CG9801 - chr3R 8740364 intron CG9801 - chr3R_8_8740001 chr3R_8740001 RAL-892 1859 chr3R 8743175 8743215 chr3R 8743276 8743317 11 99 5.5 4.5 5.0 1.8 142 chr3R 8743175 intron CG9801 - chr3R 8743246 intron CG9801 - chr3R 8743317 intron CG9801 - chr3R_11_8740001 chr3R_8740001 RAL-892 1860 chr3R 8917874 8917900 chr3R 8917972 8918000 13 99 4.5 4.5 4.5 2.4 126 chr3R 8917874 intron pyd - chr3R 8917937 intron pyd - chr3R 8918000 intron pyd - chr3R_13_8915001 chr3R_8915001 RAL-892 1861 chr3R 8961456 8961512 chr3R 8961573 8961629 13 112 5.0 0.5 2.8 3.4 173 chr3R 8961456 intron CG11966 - chr3R 8961542 intron CG11966 - chr3R 8961629 intron CG11966 - chr3R_13_8960001 chr3R_8960001 RAL-892 1862 chr3R 9101821 9101868 chr3R 9101938 9101986 12 118 6.0 2.0 4.0 2.4 165 chr3R 9101821 intron pum - chr3R 9101904 intron pum - chr3R 9101986 intron pum - chr3R_12_9100001 chr3R_9100001 RAL-892 1863 chr3R 9108854 9108884 chr3R 9108950 9108980 9 95 2.0 2.0 2.0 3.0 126 chr3R 9108854 intron pum - chr3R 9108917 intron pum - chr3R 9108980 intron pum - chr3R_9_9105001 chr3R_9105001 RAL-892 1864 chr3R 9141148 9141191 chr3R 9141257 9141284 10 106 5.0 4.0 4.5 1.8 136 chr3R 9141148 intron pum - chr3R 9141216 intron pum - chr3R 9141284 intron pum - chr3R_10_9140001 chr3R_9140001 RAL-892 1865 chr3R 9278777 9278809 chr3R 9284057 9284082 Rt1a 9 5274 6.0 8.5 7.2 1.1 5305 chr3R 9278777 intergenic not near genes chr3R 9281430 intergenic not near genes chr3R 9284082 intergenic not near genes chr3R_9_9280001 chr3R_9280001 RAL-892 1866 chr3R 9313305 9313337 chr3R 9313411 9313443 12 104 5.0 4.5 4.8 2.1 138 chr3R 9313305 intron CG8861 - chr3R 9313374 intron CG8861 - chr3R 9313443 intron CG8861 - chr3R_12_9310001 chr3R_9310001 RAL-892 1867 chr3R 9319557 9319602 chr3R 9320012 9320057 jockey 15 455 6.0 6.5 6.2 2.1 500 chr3R 9319557 intron CG8861 - chr3R 9319807 intron CG8861 - chr3R 9320057 intron CG8861 - chr3R_15_9315001 chr3R_9315001 RAL-892 1868 chr3R 9330038 9330039 chr3R 18955051 18955052 4 9625013 18.5 19.5 19.0 0.2 9625014 chr3R 9330038 intron CG12951 - chr3R 14142545 intergenic not near genes chr3R 18955052 intron,intron CG42613 +,CG43732 + chr3R_4_14140001 chr3R_14140001 RAL-892 1869 chr3R 9361805 9361837 chr3R 9362066 9362098 pogo 5 261 4.0 3.5 3.8 1.0 293 chr3R 9361805 3` UTR CG45050 + chr3R 9361952 3` UTR CG45050 + chr3R 9362098 3` UTR CG45050 + chr3R_5_9360001 chr3R_9360001 RAL-892 1870 chr3R 9362956 9363005 chr3R 9363065 9363114 17 109 5.0 3.5 4.2 3.3 158 chr3R 9362956 3` UTR CG45050 + chr3R 9363035 intergenic CG45050 +,CG18473 + chr3R 9363114 intergenic CG45050 +,CG18473 + chr3R_17_9360001 chr3R_9360001 RAL-892 1871 chr3R 9390515 9390564 chr3R 9390619 9390658 15 101 3.0 2.0 2.5 4.3 143 chr3R 9390515 intron FER - chr3R 9390586 intron FER - chr3R 9390658 intron FER - chr3R_15_9390001 chr3R_9390001 RAL-892 1872 chr3R 9425885 9425914 chr3R 9426074 9426093 8 186 1.0 1.5 1.2 3.6 208 chr3R 9425885 intron ps + chr3R 9425989 intron ps + chr3R 9426093 intron ps + chr3R_8_9425001 chr3R_9425001 RAL-892 1873 chr3R 9601453 9601491 chr3R 9601585 9601629 13 137 5.0 5.5 5.2 2.1 176 chr3R 9601453 intron CG8312 + chr3R 9601541 intron CG8312 + chr3R 9601629 intron CG8312 + chr3R_13_9600001 chr3R_9600001 RAL-892 1874 chr3R 9740534 9740552 chr3R 9740640 9740658 10 106 4.5 6.0 5.2 1.6 124 chr3R 9740534 intergenic Pnn + chr3R 9740596 intergenic Pnn + chr3R 9740658 intergenic Pnn + chr3R_10_9740001 chr3R_9740001 RAL-892 1875 chr3R 9787416 9787462 chr3R 9787507 9787520 15 94 4.0 5.5 4.8 2.6 104 chr3R 9787416 3` UTR CG8500 + chr3R 9787468 3` UTR CG8500 + chr3R 9787520 3` UTR CG8500 + chr3R_15_9785001 chr3R_9785001 RAL-892 1876 chr3R 9829386 9829435 chr3R 9829491 9829540 17 105 2.0 4.5 3.2 4.0 154 chr3R 9829386 intron Teh1 - chr3R 9829463 intron Teh1 - chr3R 9829540 intron Teh1 - chr3R_17_9825001 chr3R_9825001 RAL-892 1877 chr3R 9878000 9878024 chr3R 9878108 9878113 8 102 1.5 2.5 2.0 2.7 113 chr3R 9878000 intron,intron Glut4EF +,CR45029 - chr3R 9878056 intron,intron Glut4EF +,CR45029 - chr3R 9878113 intron,intron Glut4EF +,CR45029 - chr3R_8_9875001 chr3R_9875001 RAL-892 1878 chr3R 9885632 9885652 chr3R 9885736 9885756 6 104 4.0 12.0 8.0 0.7 124 chr3R 9885632 intron Glut4EF + chr3R 9885694 intron Glut4EF + chr3R 9885756 intron Glut4EF + chr3R_6_9885001 chr3R_9885001 RAL-892 1879 chr3R 9898767 9898812 chr3R 9898879 9898911 13 110 5.5 3.0 4.2 2.5 144 chr3R 9898767 intron Glut4EF + chr3R 9898839 intron Glut4EF + chr3R 9898911 intron Glut4EF + chr3R_13_9895001 chr3R_9895001 RAL-892 1880 chr3R 10102624 10102656 chr3R 10102720 10102752 14 96 4.5 6.0 5.2 2.3 128 chr3R 10102624 3` UTR Fmr1 - chr3R 10102688 3` UTR Fmr1 - chr3R 10102752 3` UTR Fmr1 - chr3R_14_10100001 chr3R_10100001 RAL-892 1881 chr3R 10231769 10231813 chr3R 10237366 10237392 mdg3 23 5592 6.5 5.5 6.0 3.3 5623 chr3R 10231769 intron CG42795 + chr3R 10234580 intron CG42795 + chr3R 10237392 intron CG42795 + chr3R_23_10230001 chr3R_10230001 RAL-892 1882 chr3R 10255365 10255382 chr3R 10260825 10260842 I-element 9 5460 6.5 2.5 4.5 1.6 5477 chr3R 10255365 3` UTR Sirt6 - chr3R 10258104 intron Sirt6 - chr3R 10260842 exon Sirt6 - chr3R_9_10255001 chr3R_10255001 RAL-892 1883 chr3R 10401883 10401925 chr3R 10402090 10402128 8 208 4.5 4.5 4.5 1.5 245 chr3R 10401883 exon mthl11 + chr3R 10402006 intron mthl11 + chr3R 10402128 exon mthl11 + chr3R_8_10400001 chr3R_10400001 RAL-892 1884 chr3R 10531867 10531898 chr3R 10531968 10531999 7 98 2.5 0.5 1.5 2.8 132 chr3R 10531867 intron hth - chr3R 10531933 intron hth - chr3R 10531999 intron hth - chr3R_7_10530001 chr3R_10530001 RAL-892 1885 chr3R 10535315 10535334 chr3R 10535428 10535447 8 113 4.5 0.0 2.2 2.5 132 chr3R 10535315 intron hth - chr3R 10535381 intron hth - chr3R 10535447 intron hth - chr3R_8_10535001 chr3R_10535001 RAL-892 1886 chr3R 10594571 10594623 chr3R 10594676 10594699 18 99 6.0 3.0 4.5 3.3 128 chr3R 10594571 intron hth - chr3R 10594635 intron hth - chr3R 10594699 intron hth - chr3R_18_10590001 chr3R_10590001 RAL-892 1887 chr3R 10646086 10646136 chr3R 10646257 10646306 12 170 3.0 1.0 2.0 4.0 220 chr3R 10646086 intergenic CR44018 + chr3R 10646196 intergenic CR44018 + chr3R 10646306 intergenic not near genes chr3R_12_10645001 chr3R_10645001 RAL-892 1888 chr3R 10723747 10723774 chr3R 10723854 10723885 10 111 6.5 0.5 3.5 2.2 138 chr3R 10723747 intergenic not near genes chr3R 10723816 intergenic not near genes chr3R 10723885 intergenic not near genes chr3R_10_10720001 chr3R_10720001 RAL-892 1889 chr3R 10727641 10727677 chr3R 10727735 10727750 10 94 3.5 4.0 3.8 2.1 109 chr3R 10727641 intergenic not near genes chr3R 10727696 intergenic not near genes chr3R 10727750 intergenic not near genes chr3R_10_10725001 chr3R_10725001 RAL-892 1890 chr3R 10732306 10732333 chr3R 10733198 10733225 7 892 5.0 5.0 5.0 1.2 919 chr3R 10732306 intergenic not near genes chr3R 10732766 intergenic not near genes chr3R 10733225 intergenic not near genes chr3R_7_10730001 chr3R_10730001 RAL-892 1891 chr3R 10745404 10745452 chr3R 10745511 10745547 12 105 1.0 3.5 2.2 3.8 143 chr3R 10745404 intron TkR86C - chr3R 10745476 intron TkR86C - chr3R 10745547 intron TkR86C - chr3R_12_10745001 chr3R_10745001 RAL-892 1892 chr3R 10817199 10817229 chr3R 10817302 10817332 13 103 10.0 4.0 7.0 1.6 133 chr3R 10817199 3` UTR CG4089 + chr3R 10817266 3` UTR CG4089 + chr3R 10817332 3` UTR CG4089 + chr3R_13_10815001 chr3R_10815001 RAL-892 1893 chr3R 10817230 10817248 chr3R 10817301 10817351 5 97 6.5 4.0 5.2 0.8 121 chr3R 10817230 3` UTR CG4089 + chr3R 10817290 3` UTR CG4089 + chr3R 10817351 3` UTR CG4089 + chr3R_5_10815001 chr3R_10815001 RAL-892 1894 chr3R 10886867 10886894 chr3R 10886961 10886994 6 98 4.0 5.5 4.8 1.0 127 chr3R 10886867 intron Leash + chr3R 10886930 intron Leash + chr3R 10886994 intron Leash + chr3R_6_10885001 chr3R_10885001 RAL-892 1895 chr3R 10919664 10919717 chr3R 10919762 10919815 19 96 4.5 1.0 2.8 5.0 151 chr3R 10919664 intergenic not near genes chr3R 10919740 intergenic not near genes chr3R 10919815 intergenic not near genes chr3R_19_10915001 chr3R_10915001 RAL-892 1896 chr3R 10920028 10920075 chr3R 10920126 10920173 18 98 7.0 1.0 4.0 3.6 145 chr3R 10920028 intergenic not near genes chr3R 10920100 intergenic not near genes chr3R 10920173 intergenic not near genes chr3R_18_10920001 chr3R_10920001 RAL-892 1897 chr3R 10979659 10979679 chr3R 10979761 10979780 6 102 3.5 5.5 4.5 1.1 121 chr3R 10979659 intron CG34114 + chr3R 10979720 intron CG34114 + chr3R 10979780 intron CG34114 + chr3R_6_10975001 chr3R_10975001 RAL-892 1898 chr3R 10994263 10994310 chr3R 10994361 10994409 8 98 4.0 4.5 4.2 1.5 146 chr3R 10994263 intron CG34114 + chr3R 10994336 intron CG34114 + chr3R 10994409 intron CG34114 + chr3R_8_10990001 chr3R_10990001 RAL-892 1899 chr3R 11016968 11017012 chr3R 11017166 11017178 10 184 4.5 4.0 4.2 1.9 210 chr3R 11016968 intron CG34114 + chr3R 11017073 intron CG34114 + chr3R 11017178 intron CG34114 + chr3R_10_11015001 chr3R_11015001 RAL-892 1900 chr3R 11078930 11078980 chr3R 11079030 11079080 17 99 2.5 6.0 4.2 3.3 150 chr3R 11078930 intergenic not near genes chr3R 11079005 intergenic not near genes chr3R 11079080 intergenic not near genes chr3R_17_11075001 chr3R_11075001 RAL-892 1901 chr3R 11081809 11081824 chr3R 11082373 11082388 8 564 6.0 3.5 4.8 1.4 579 chr3R 11081809 intergenic not near genes chr3R 11082098 intergenic not near genes chr3R 11082388 intergenic not near genes chr3R_8_11080001 chr3R_11080001 RAL-892 1902 chr3R 11081825 11081855 chr3R 11082365 11082419 14 560 2.0 3.0 2.5 4.0 594 chr3R 11081825 intergenic not near genes chr3R 11082122 intergenic not near genes chr3R 11082419 intergenic not near genes chr3R_14_11080001 chr3R_11080001 RAL-892 1903 chr3R 11099641 11099688 chr3R 11099791 11099840 10 148 3.5 2.0 2.8 2.6 199 chr3R 11099641 intergenic not near genes chr3R 11099740 intergenic not near genes chr3R 11099840 intergenic not near genes chr3R_10_11095001 chr3R_11095001 RAL-892 1904 chr3R 11102317 11102326 chr3R 11102417 11102427 4 100 6.5 7.0 6.8 0.5 110 chr3R 11102317 intergenic not near genes chr3R 11102372 intergenic not near genes chr3R 11102427 intergenic not near genes chr3R_4_11100001 chr3R_11100001 RAL-892 1905 chr3R 11102330 11102346 chr3R 11102413 11102446 6 95 4.0 5.5 4.8 1.0 116 chr3R 11102330 intergenic not near genes chr3R 11102388 intergenic not near genes chr3R 11102446 intergenic not near genes chr3R_6_11100001 chr3R_11100001 RAL-892 1906 chr3R 11103149 11103161 chr3R 11103251 11103263 9 102 0.0 0.0 0.0 9.0 114 chr3R 11103149 intergenic not near genes chr3R 11103206 intergenic not near genes chr3R 11103263 intergenic not near genes chr3R_9_11100001 chr3R_11100001 RAL-892 1907 chr3R 11265919 11266218 chr3R 11266016 11266296 6 96 6.5 11.0 8.8 0.6 377 chr3R 11265919 intergenic not near genes chr3R 11266108 intergenic not near genes chr3R 11266296 intergenic not near genes chr3R_6_11265001 chr3R_11265001 RAL-892 1908 chr3R 11266219 11266235 chr3R 11266307 11266340 8 103 3.0 4.0 3.5 1.8 121 chr3R 11266219 intergenic not near genes chr3R 11266280 intergenic not near genes chr3R 11266340 intergenic not near genes chr3R_8_11265001 chr3R_11265001 RAL-892 1909 chr3R 11272356 11272404 chr3R 11272457 11272505 6 100 2.0 1.0 1.5 2.4 149 chr3R 11272356 intron CR31386 - chr3R 11272430 intron CR31386 - chr3R 11272505 intron CR31386 - chr3R_6_11270001 chr3R_11270001 RAL-892 1910 chr3R 11342522 11342570 chr3R 11342618 11342666 15 96 5.5 3.5 4.5 2.7 144 chr3R 11342522 intron pros + chr3R 11342594 intron pros + chr3R 11342666 intron pros + chr3R_15_11340001 chr3R_11340001 RAL-892 1911 chr3R 11379218 11379259 chr3R 11388393 11388429 roo 12 9174 6.5 5.0 5.8 1.8 9211 chr3R 11379218 intron pros + chr3R 11383824 intron pros + chr3R 11388429 intron pros + chr3R_12_11380001 chr3R_11380001 RAL-892 1912 chr3R 11535256 11535291 chr3R 11535516 11535552 6 259 3.5 1.5 2.5 1.7 296 chr3R 11535256 intron dpr4 - chr3R 11535404 intron dpr4 - chr3R 11535552 intron,5` UTR dpr4 -,CR45056 + chr3R_6_11535001 chr3R_11535001 RAL-892 1913 chr3R 11685360 11685402 chr3R 11685467 11685509 15 106 6.5 5.5 6.0 2.1 149 chr3R 11685360 exon CG6834 - chr3R 11685434 intron CG6834 - chr3R 11685509 exon CG6834 - chr3R_15_11685001 chr3R_11685001 RAL-892 1914 chr3R 11694705 11694746 chr3R 11694818 11694859 24 113 5.5 5.0 5.2 3.9 154 chr3R 11694705 intergenic Fer3 - chr3R 11694782 intergenic Fer3 - chr3R 11694859 intergenic not near genes chr3R_24_11690001 chr3R_11690001 RAL-892 1915 chr3R 11736906 11736956 chr3R 11737061 11737111 15 159 33.5 27.0 30.2 0.5 205 chr3R 11736906 3` UTR Blm - chr3R 11737008 3` UTR Blm - chr3R 11737111 exon Blm - chr3R_15_11735001 chr3R_11735001 RAL-892 1916 chr3R 11757733 11757757 chr3R 11757844 11757848 6 108 9.0 3.5 6.2 0.8 115 chr3R 11757733 intron Lk6 - chr3R 11757790 intron Lk6 - chr3R 11757848 intron Lk6 - chr3R_6_11755001 chr3R_11755001 RAL-892 1917 chr3R 11830331 11830360 chr3R 11830435 11830464 7 104 2.5 4.5 3.5 1.6 133 chr3R 11830331 intron CG6959 - chr3R 11830398 intron CG6959 - chr3R 11830464 intron CG6959 - chr3R_7_11830001 chr3R_11830001 RAL-892 1918 chr3R 11841057 11841090 chr3R 11846253 11846291 BS 8 5194 3.5 4.5 4.0 1.6 5234 chr3R 11841057 intron CG6959 - chr3R 11843674 intron CG6959 - chr3R 11846291 intron CG6959 - chr3R_8_11840001 chr3R_11840001 RAL-892 1919 chr3R 11853414 11853472 chr3R 11853583 11853639 17 164 0.0 7.5 3.8 3.5 225 chr3R 11853414 intron CG6959 - chr3R 11853526 intron CG6959 - chr3R 11853639 intron CG6959 - chr3R_17_11850001 chr3R_11850001 RAL-892 1920 chr3R 11853752 11853793 chr3R 11853877 11853918 15 124 7.5 4.5 6.0 2.1 166 chr3R 11853752 intron CG6959 - chr3R 11853835 intron CG6959 - chr3R 11853918 intron CG6959 - chr3R_15_11850001 chr3R_11850001 RAL-892 1921 chr3R 11990632 11990662 chr3R 11990740 11990770 5 108 6.5 0.0 3.2 1.2 138 chr3R 11990632 intron mfas - chr3R 11990701 intron mfas - chr3R 11990770 intron mfas - chr3R_5_11990001 chr3R_11990001 RAL-892 1922 chr3R 12022864 12022916 chr3R 12025061 12025113 pogo 14 2195 4.5 1.5 3.0 3.5 2249 chr3R 12022864 intergenic not near genes chr3R 12023988 intergenic not near genes chr3R 12025113 intergenic not near genes chr3R_14_12020001 chr3R_12020001 RAL-892 1923 chr3R 12045154 12045200 chr3R 12045250 12045281 21 94 3.0 4.5 3.8 4.4 127 chr3R 12045154 intergenic not near genes chr3R 12045218 intergenic not near genes chr3R 12045281 intergenic not near genes chr3R_21_12045001 chr3R_12045001 RAL-892 1924 chr3R 12080848 12080896 chr3R 12080945 12080993 10 95 4.5 4.5 4.5 1.8 145 chr3R 12080848 intron CG14741 - chr3R 12080920 intron CG14741 - chr3R 12080993 intron CG14741 - chr3R_10_12080001 chr3R_12080001 RAL-892 1925 chr3R 12267836 12267889 chr3R 12267936 12267989 14 100 4.5 5.0 4.8 2.4 153 chr3R 12267836 intron svp + chr3R 12267912 intron svp + chr3R 12267989 intron svp + chr3R_14_12265001 chr3R_12265001 RAL-892 1926 chr3R 12383849 12383857 chr3R 12383968 12383970 4 118 10.5 7.0 8.8 0.4 121 chr3R 12383849 intron GstD11 + chr3R 12383910 intron GstD11 + chr3R 12383970 intron GstD11 + chr3R_4_12380001 chr3R_12380001 RAL-892 1927 chr3R 12602375 12602416 chr3R 12602473 12602514 9 97 8.5 4.0 6.2 1.2 139 chr3R 12602375 intergenic not near genes chr3R 12602444 intergenic not near genes chr3R 12602514 intergenic not near genes chr3R_9_12600001 chr3R_12600001 RAL-892 1928 chr3R 12706469 12706509 chr3R 12715761 12715810 11 9297 37.0 32.5 34.8 0.3 9341 chr3R 12706469 exon mus308 - chr3R 12711140 exon mus308 - chr3R 12715810 intron Men - chr3R_11_12710001 chr3R_12710001 RAL-892 1929 chr3R 12735161 12735182 chr3R 12735431 12735442 7 267 5.5 3.0 4.2 1.3 281 chr3R 12735161 intergenic not near genes chr3R 12735302 intergenic not near genes chr3R 12735442 intergenic not near genes chr3R_7_12735001 chr3R_12735001 RAL-892 1930 chr3R 12763122 12763155 chr3R 12763219 12763252 10 95 0.5 3.5 2.0 3.3 130 chr3R 12763122 intron beat-Vc - chr3R 12763187 intron beat-Vc - chr3R 12763252 intron beat-Vc - chr3R_10_12760001 chr3R_12760001 RAL-892 1931 chr3R 12771392 12771420 chr3R 12771542 12771570 6 142 6.0 1.0 3.5 1.3 178 chr3R 12771392 intron beat-Vc - chr3R 12771481 intron beat-Vc - chr3R 12771570 intron beat-Vc - chr3R_6_12770001 chr3R_12770001 RAL-892 1932 chr3R 12787929 12787956 chr3R 12788032 12788059 9 103 4.0 4.5 4.2 1.7 130 chr3R 12787929 intergenic not near genes chr3R 12787994 intergenic not near genes chr3R 12788059 intergenic not near genes chr3R_9_12785001 chr3R_12785001 RAL-892 1933 chr3R 12866476 12866513 chr3R 12866647 12866684 15 171 3.5 3.5 3.5 3.3 208 chr3R 12866476 intergenic not near genes chr3R 12866580 intergenic not near genes chr3R 12866684 intergenic not near genes chr3R_15_12865001 chr3R_12865001 RAL-892 1934 chr3R 12920143 12920185 chr3R 12925361 12925379 copia 8 5206 0.5 7.0 3.8 1.7 5236 chr3R 12920143 intron beat-Vb + chr3R 12922761 intron beat-Vb + chr3R 12925379 intron beat-Vb + chr3R_8_12920001 chr3R_12920001 RAL-892 1935 chr3R 13059943 13059975 chr3R 13060158 13060190 9 215 1.0 1.5 1.2 4.1 247 chr3R 13059943 intron sim + chr3R 13060066 intron sim + chr3R 13060190 intron sim + chr3R_9_13060001 chr3R_13060001 RAL-892 1936 chr3R 13066985 13067132 chr3R 13067092 13067228 12 101 0.0 0.0 0.0 12.0 243 chr3R 13066985 intron sim + chr3R 13067106 intron sim + chr3R 13067228 intron sim + chr3R_12_13065001 chr3R_13065001 RAL-892 1937 chr3R 13073960 13073975 chr3R 13074059 13074074 6 99 4.0 1.5 2.8 1.6 114 chr3R 13073960 intron sim + chr3R 13074017 intron sim + chr3R 13074074 intron sim + chr3R_6_13070001 chr3R_13070001 RAL-892 1938 chr3R 13073984 13074005 chr3R 13074052 13074094 9 93 4.0 1.5 2.8 2.4 110 chr3R 13073984 intron sim + chr3R 13074039 intron sim + chr3R 13074094 exon sim + chr3R_9_13070001 chr3R_13070001 RAL-892 1939 chr3R 13075338 13075371 chr3R 13075439 13075472 13 101 5.5 2.0 3.8 2.7 134 chr3R 13075338 intron sim + chr3R 13075405 intron sim + chr3R 13075472 intron sim + chr3R_13_13075001 chr3R_13075001 RAL-892 1940 chr3R 13119144 13119181 chr3R 13119353 13119395 10 209 1.5 4.0 2.8 2.6 251 chr3R 13119144 intron timeout + chr3R 13119270 intron timeout + chr3R 13119395 intron timeout + chr3R_10_13115001 chr3R_13115001 RAL-892 1941 chr3R 13135823 13135834 chr3R 13138008 13138019 pogo 7 2185 5.0 5.0 5.0 1.2 2196 chr3R 13135823 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136921 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138019 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_7_13135001 chr3R_13135001 RAL-892 1942 chr3R 13143020 13143065 chr3R 13148615 13148652 mdg3 7 5591 2.5 3.5 3.0 1.8 5632 chr3R 13143020 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145836 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148652 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_7_13145001 chr3R_13145001 RAL-892 1943 chr3R 13205402 13205438 chr3R 13205490 13205539 13 90 3.5 4.5 4.0 2.6 137 chr3R 13205402 intergenic not near genes chr3R 13205470 intergenic not near genes chr3R 13205539 intergenic not near genes chr3R_13_13205001 chr3R_13205001 RAL-892 1944 chr3R 13252259 13252285 chr3R 13252341 13252379 7 93 0.0 4.0 2.0 2.3 120 chr3R 13252259 intron Ace - chr3R 13252319 intron Ace - chr3R 13252379 intron Ace - chr3R_7_13250001 chr3R_13250001 RAL-892 1945 chr3R 13272034 13272078 chr3R 13272139 13272183 19 105 3.0 3.0 3.0 4.8 149 chr3R 13272034 intergenic CG8449 - chr3R 13272108 intergenic CG8449 - chr3R 13272183 intergenic CG8449 - chr3R_19_13270001 chr3R_13270001 RAL-892 1946 chr3R 13274200 13274246 chr3R 13274291 13274345 15 95 3.0 3.5 3.2 3.6 145 chr3R 13274200 intergenic not near genes chr3R 13274272 intergenic not near genes chr3R 13274345 intergenic not near genes chr3R_15_13270001 chr3R_13270001 RAL-892 1947 chr3R 13314080 13314120 chr3R 13318887 13318928 Doc 7 4808 1.5 5.0 3.2 1.7 4848 chr3R 13314080 intergenic not near genes chr3R 13316504 intergenic not near genes chr3R 13318928 intergenic CG45080 - chr3R_7_13315001 chr3R_13315001 RAL-892 1948 chr3R 13378818 13378869 chr3R 13378928 13378980 8 110 3.5 3.0 3.2 1.9 162 chr3R 13378818 intron CG9813 - chr3R 13378899 intron CG9813 - chr3R 13378980 intron CG9813 - chr3R_8_13375001 chr3R_13375001 RAL-892 1949 chr3R 13391251 13391301 chr3R 13391358 13391408 12 106 2.5 2.0 2.2 3.8 157 chr3R 13391251 intron CCHa2 - chr3R 13391330 intron CCHa2 - chr3R 13391408 intron CCHa2 - chr3R_12_13390001 chr3R_13390001 RAL-892 1950 chr3R 13496612 13496662 chr3R 13496709 13496761 16 99 3.0 2.5 2.8 4.2 149 chr3R 13496612 intergenic not near genes chr3R 13496686 intergenic not near genes chr3R 13496761 intergenic not near genes chr3R_16_13495001 chr3R_13495001 RAL-892 1951 chr3R 13580825 13580830 chr3R 13580922 13580927 5 97 11.5 9.0 10.2 0.4 102 chr3R 13580825 intergenic not near genes chr3R 13580876 intergenic not near genes chr3R 13580927 intergenic not near genes chr3R_5_13580001 chr3R_13580001 RAL-892 1952 chr3R 13603037 13603074 chr3R 13603148 13603174 7 109 1.5 1.5 1.5 2.8 137 chr3R 13603037 intergenic not near genes chr3R 13603106 intergenic not near genes chr3R 13603174 intergenic not near genes chr3R_7_13600001 chr3R_13600001 RAL-892 1953 chr3R 13608059 13608099 chr3R 13608429 13608466 7 367 35.5 28.5 32.0 0.2 407 chr3R 13608059 intron CG9759 - chr3R 13608262 intron CG9759 - chr3R 13608466 intron CG9759 - chr3R_7_13605001 chr3R_13605001 RAL-892 1954 chr3R 13609559 13609580 chr3R 13609673 13609694 5 114 0.0 2.0 1.0 2.5 135 chr3R 13609559 intergenic CG9759 - chr3R 13609626 intergenic CG9759 - chr3R 13609694 intergenic CG9759 - chr3R_5_13605001 chr3R_13605001 RAL-892 1955 chr3R 13672922 13672965 chr3R 13673019 13673063 16 97 4.5 5.0 4.8 2.8 141 chr3R 13672922 intron Task6 - chr3R 13672992 intron Task6 - chr3R 13673063 intron Task6 - chr3R_16_13670001 chr3R_13670001 RAL-892 1956 chr3R 13878767 13878804 chr3R 13878859 13878877 6 90 2.5 2.0 2.2 1.9 110 chr3R 13878767 intergenic not near genes chr3R 13878822 intergenic not near genes chr3R 13878877 intergenic not near genes chr3R_6_13875001 chr3R_13875001 RAL-892 1957 chr3R 14005676 14005709 chr3R 14005799 14005839 11 129 6.0 6.5 6.2 1.5 163 chr3R 14005676 intron rdx - chr3R 14005758 intron rdx - chr3R 14005839 intron rdx - chr3R_11_14005001 chr3R_14005001 RAL-892 1958 chr3R 14067122 14067155 chr3R 14067221 14067254 12 99 3.5 1.5 2.5 3.4 132 chr3R 14067122 exon foxo + chr3R 14067188 intron foxo + chr3R 14067254 intron foxo + chr3R_12_14065001 chr3R_14065001 RAL-892 1959 chr3R 7773344 7773344 chr3R 14104440 14104440 5 6331096 21.5 21.0 21.2 0.2 6331096 chr3R 7773344 intergenic not near genes chr3R 10938892 intergenic not near genes chr3R 14104440 intergenic CG12402 - chr3R_5_10935001 chr3R_10935001 RAL-892 1960 chr3R 14169729 14169769 chr3R 14169832 14169872 9 103 0.0 3.5 1.8 3.2 143 chr3R 14169729 3` UTR Dop1R1 - chr3R 14169800 3` UTR Dop1R1 - chr3R 14169872 3` UTR Dop1R1 - chr3R_9_14165001 chr3R_14165001 RAL-892 1961 chr3R 14170131 14170175 chr3R 14170241 14170284 10 107 4.5 2.5 3.5 2.2 153 chr3R 14170131 3` UTR Dop1R1 - chr3R 14170208 3` UTR Dop1R1 - chr3R 14170284 3` UTR Dop1R1 - chr3R_10_14170001 chr3R_14170001 RAL-892 1962 chr3R 14180791 14180818 chr3R 14185576 14185602 F-element 10 4785 5.0 0.0 2.5 2.9 4811 chr3R 14180791 intron Dop1R1 - chr3R 14183196 intron Dop1R1 - chr3R 14185602 intron Dop1R1 - chr3R_10_14180001 chr3R_14180001 RAL-892 1963 chr3R 14246405 14246413 chr3R 14247900 14247905 jockey 4 1503 2.0 6.5 4.2 0.8 1500 chr3R 14246405 intergenic not near genes chr3R 14247155 intergenic not near genes chr3R 14247905 intergenic not near genes chr3R_4_14245001 chr3R_14245001 RAL-892 1964 chr3R 14253685 14253720 chr3R 14253783 14253818 16 98 4.0 4.5 4.2 3.1 133 chr3R 14253685 intron Aats-met - chr3R 14253752 intron Aats-met - chr3R 14253818 intron Aats-met - chr3R_16_14250001 chr3R_14250001 RAL-892 1965 chr3R 14527389 14527410 chr3R 14527484 14527506 5 96 4.5 5.5 5.0 0.8 117 chr3R 14527389 intron Pde6 - chr3R 14527448 intron Pde6 - chr3R 14527506 intron Pde6 - chr3R_5_14525001 chr3R_14525001 RAL-892 1966 chr3R 14546052 14546067 chr3R 14546149 14546164 6 97 6.0 3.5 4.8 1.0 112 chr3R 14546052 intron Pde6 - chr3R 14546108 intron Pde6 - chr3R 14546164 intron Pde6 - chr3R_6_14545001 chr3R_14545001 RAL-892 1967 chr3R 14577938 14577989 chr3R 14578074 14578125 21 136 2.5 4.0 3.2 5.0 187 chr3R 14577938 intron stumps + chr3R 14578032 intron stumps + chr3R 14578125 intron stumps + chr3R_21_14575001 chr3R_14575001 RAL-892 1968 chr3R 14579340 14579374 chr3R 14579449 14579481 6 106 6.0 3.5 4.8 1.0 141 chr3R 14579340 intron stumps + chr3R 14579410 intron stumps + chr3R 14579481 intron stumps + chr3R_6_14575001 chr3R_14575001 RAL-892 1969 chr3R 14633192 14633218 chr3R 14633291 14633312 5 97 5.0 7.0 6.0 0.7 120 chr3R 14633192 intron,intron CG7886 -,Cad88C + chr3R 14633252 intron,intron CG7886 -,Cad88C + chr3R 14633312 intron,intron CG7886 -,Cad88C + chr3R_5_14630001 chr3R_14630001 RAL-892 1970 chr3R 14704372 14704416 chr3R 14704463 14704513 13 94 4.5 4.0 4.2 2.5 141 chr3R 14704372 intron kibra - chr3R 14704442 intron kibra - chr3R 14704513 intron kibra - chr3R_13_14700001 chr3R_14700001 RAL-892 1971 chr3R 14767507 14767557 chr3R 14767624 14767668 8 114 4.5 1.5 3.0 2.0 161 chr3R 14767507 intron jvl + chr3R 14767588 intron jvl + chr3R 14767668 intron jvl + chr3R_8_14765001 chr3R_14765001 RAL-892 1972 chr3R 14775991 14776030 chr3R 14776092 14776120 12 107 3.0 1.5 2.2 3.8 129 chr3R 14775991 intron jvl + chr3R 14776056 intron jvl + chr3R 14776120 intron jvl + chr3R_12_14775001 chr3R_14775001 RAL-892 1973 chr3R 14779060 14779096 chr3R 14779160 14779196 12 98 5.5 6.0 5.8 1.8 136 chr3R 14779060 intron jvl + chr3R 14779128 intron jvl + chr3R 14779196 intron jvl + chr3R_12_14775001 chr3R_14775001 RAL-892 1974 chr3R 14898457 14898495 chr3R 14898597 14898635 11 140 6.0 3.0 4.5 2.0 178 chr3R 14898457 intergenic Nup93-2 -,CG3817 + chr3R 14898546 intergenic Nup93-2 -,CG3817 + chr3R 14898635 intergenic CG3817 +,Nup93-2 - chr3R_11_14895001 chr3R_14895001 RAL-892 1975 chr3R 14924356 14924402 chr3R 14924463 14924509 5 107 2.0 4.5 3.2 1.2 153 chr3R 14924356 intergenic not near genes chr3R 14924432 intergenic not near genes chr3R 14924509 intergenic not near genes chr3R_5_14920001 chr3R_14920001 RAL-892 1976 chr3R 15005620 15005634 chr3R 15005951 15005965 5 331 4.5 6.5 5.5 0.8 345 chr3R 15005620 intergenic not near genes chr3R 15005792 intergenic not near genes chr3R 15005965 intergenic not near genes chr3R_5_15005001 chr3R_15005001 RAL-892 1977 chr3R 15026312 15026342 chr3R 15026418 15026448 7 106 4.5 2.5 3.5 1.6 136 chr3R 15026312 intergenic not near genes chr3R 15026380 intergenic not near genes chr3R 15026448 intergenic not near genes chr3R_7_15025001 chr3R_15025001 RAL-892 1978 chr3R 15041405 15041455 chr3R 15045193 15045243 Doc 15 3788 4.5 3.0 3.8 3.1 3838 chr3R 15041405 intergenic not near genes chr3R 15043324 intergenic not near genes chr3R 15045243 intergenic not near genes chr3R_15_15040001 chr3R_15040001 RAL-892 1979 chr3R 15059302 15059470 chr3R 15059550 15059577 BS 8 213 0.0 3.5 1.8 2.9 275 chr3R 15059302 intron dpr9 - chr3R 15059440 intron dpr9 - chr3R 15059577 intron dpr9 - chr3R_8_15055001 chr3R_15055001 RAL-892 1980 chr3R 15078330 15078372 chr3R 15078430 15078472 18 99 0.5 7.5 4.0 3.6 142 chr3R 15078330 intergenic CG6974 - chr3R 15078401 intergenic CG6974 - chr3R 15078472 intergenic CG6974 - chr3R_18_15075001 chr3R_15075001 RAL-892 1981 chr3R 15079789 15079818 chr3R 15080050 15080079 pogo 12 261 3.5 0.0 1.8 4.3 290 chr3R 15079789 3` UTR CG6966 - chr3R 15079934 3` UTR CG6966 - chr3R 15080079 3` UTR CG6966 - chr3R_12_15075001 chr3R_15075001 RAL-892 1982 chr3R 15084129 15084177 chr3R 15084281 15084326 10 152 1.5 4.0 2.8 2.6 197 chr3R 15084129 intron CG6966 - chr3R 15084228 intron CG6966 - chr3R 15084326 intron CG6966 - chr3R_10_15080001 chr3R_15080001 RAL-892 1983 chr3R 15087142 15087167 chr3R 15087241 15087266 5 97 3.0 0.5 1.8 1.8 124 chr3R 15087142 intron CG6966 - chr3R 15087204 intron CG6966 - chr3R 15087266 intron CG6966 - chr3R_5_15085001 chr3R_15085001 RAL-892 1984 chr3R 15102487 15102527 chr3R 15109762 15109802 412 16 7275 4.0 3.0 3.5 3.6 7315 chr3R 15102487 intron CG42788 - chr3R 15106144 intron CG42788 - chr3R 15109802 intron CG42788 - chr3R_16_15105001 chr3R_15105001 RAL-892 1985 chr3R 15114906 15114927 chr3R 15115001 15115023 4 96 5.0 5.5 5.2 0.6 117 chr3R 15114906 intron CG42788 - chr3R 15114964 intron CG42788 - chr3R 15115023 intron CG42788 - chr3R_4_15110001 chr3R_15110001 RAL-892 1986 chr3R 15127762 15127810 chr3R 15127862 15127910 20 100 4.0 5.5 4.8 3.4 148 chr3R 15127762 intron CG42788 - chr3R 15127836 intron CG42788 - chr3R 15127910 intron CG42788 - chr3R_20_15125001 chr3R_15125001 RAL-892 1987 chr3R 15132045 15132070 chr3R 15135125 15135150 Juan 8 3080 8.0 9.0 8.5 0.8 3105 chr3R 15132045 intergenic CG42788 - chr3R 15133598 intergenic not near genes chr3R 15135150 3` UTR CG6912 - chr3R_8_15130001 chr3R_15130001 RAL-892 1988 chr3R 15162534 15162561 chr3R 15167319 15167332 F-element 8 4785 7.0 4.5 5.8 1.2 4798 chr3R 15162534 intron Gyc88E + chr3R 15164933 intron Gyc88E + chr3R 15167332 intron Gyc88E + chr3R_8_15160001 chr3R_15160001 RAL-892 1989 chr3R 15184517 15184570 chr3R 15184618 15184662 17 98 3.5 2.5 3.0 4.2 145 chr3R 15184517 intron Gyc88E + chr3R 15184590 intron Gyc88E + chr3R 15184662 intron Gyc88E + chr3R_17_15180001 chr3R_15180001 RAL-892 1990 chr3R 15190631 15190679 chr3R 15190776 15190824 17 144 5.5 5.0 5.2 2.7 193 chr3R 15190631 3` UTR Gyc88E + chr3R 15190728 3` UTR Gyc88E + chr3R 15190824 3` UTR Gyc88E + chr3R_17_15190001 chr3R_15190001 RAL-892 1991 chr3R 15416239 15416281 chr3R 15416332 15416381 13 94 5.0 4.0 4.5 2.4 142 chr3R 15416239 3` UTR Atx2 + chr3R 15416310 3` UTR Atx2 + chr3R 15416381 3` UTR Atx2 + chr3R_13_15415001 chr3R_15415001 RAL-892 1992 chr3R 15499420 15499460 chr3R 15499518 15499572 11 108 2.0 3.5 2.8 2.9 152 chr3R 15499420 intergenic not near genes chr3R 15499496 intergenic not near genes chr3R 15499572 intergenic not near genes chr3R_11_15495001 chr3R_15495001 RAL-892 1993 chr3R 15517585 15517634 chr3R 15517684 15517737 5 99 1.5 0.5 1.0 2.5 152 chr3R 15517585 intergenic not near genes chr3R 15517661 intergenic not near genes chr3R 15517737 intergenic not near genes chr3R_5_15515001 chr3R_15515001 RAL-892 1994 chr3R 15521955 15521991 chr3R 15522048 15522097 13 107 0.5 2.5 1.5 5.2 142 chr3R 15521955 intergenic not near genes chr3R 15522026 intergenic not near genes chr3R 15522097 intergenic not near genes chr3R_13_15520001 chr3R_15520001 RAL-892 1995 chr3R 15594655 15594666 chr3R 15594758 15594769 4 103 0.0 4.0 2.0 1.3 114 chr3R 15594655 intergenic not near genes chr3R 15594712 intergenic not near genes chr3R 15594769 intergenic not near genes chr3R_4_15590001 chr3R_15590001 RAL-892 1996 chr3R 15601159 15601193 chr3R 15608699 15608721 412 13 7539 4.0 5.5 4.8 2.2 7562 chr3R 15601159 intergenic not near genes chr3R 15604940 intergenic not near genes chr3R 15608721 intergenic not near genes chr3R_13_15600001 chr3R_15600001 RAL-892 1997 chr3R 15646770 15646797 chr3R 15646873 15646900 11 103 4.0 3.0 3.5 2.4 130 chr3R 15646770 intergenic not near genes chr3R 15646835 intergenic not near genes chr3R 15646900 intergenic not near genes chr3R_11_15645001 chr3R_15645001 RAL-892 1998 chr3R 15734172 15734191 chr3R 15734261 15734301 7 104 1.5 0.0 0.8 3.9 129 chr3R 15734172 intergenic not near genes chr3R 15734236 intergenic not near genes chr3R 15734301 intergenic not near genes chr3R_7_15730001 chr3R_15730001 RAL-892 1999 chr3R 15735225 15735235 chr3R 15739965 15739975 F-element 8 4740 2.5 3.0 2.8 2.1 4750 chr3R 15735225 intergenic not near genes chr3R 15737600 intergenic not near genes chr3R 15739975 intergenic not near genes chr3R_8_15735001 chr3R_15735001 RAL-892 2000 chr3R 15760765 15760809 chr3R 15760879 15760923 12 114 5.5 4.5 5.0 2.0 158 chr3R 15760765 intergenic not near genes chr3R 15760844 intergenic not near genes chr3R 15760923 intergenic not near genes chr3R_12_15760001 chr3R_15760001 RAL-892 2001 chr3R 15878080 15878101 chr3R 15878188 15878209 6 108 5.5 6.0 5.8 0.9 129 chr3R 15878080 intergenic not near genes chr3R 15878144 intergenic not near genes chr3R 15878209 intergenic not near genes chr3R_6_15875001 chr3R_15875001 RAL-892 2002 chr3R 15891646 15891682 chr3R 15892058 15892089 7 405 6.0 3.5 4.8 1.2 443 chr3R 15891646 intron CG14877 - chr3R 15891868 intron CG14877 - chr3R 15892089 intron CG14877 - chr3R_7_15890001 chr3R_15890001 RAL-892 2003 chr3R 15894258 15894295 chr3R 15894363 15894400 11 100 1.0 2.5 1.8 3.9 142 chr3R 15894258 intron CG14877 - chr3R 15894329 intron CG14877 - chr3R 15894400 intron CG14877 - chr3R_11_15890001 chr3R_15890001 RAL-892 2004 chr3R 15984488 15984524 chr3R 15984610 15984646 14 122 8.5 4.5 6.5 1.9 158 chr3R 15984488 intergenic not near genes chr3R 15984567 intergenic not near genes chr3R 15984646 intergenic not near genes chr3R_14_15980001 chr3R_15980001 RAL-892 2005 chr3R 16023848 16023872 chr3R 16023945 16023969 12 95 3.5 1.5 2.5 3.4 121 chr3R 16023848 intergenic not near genes chr3R 16023908 intergenic not near genes chr3R 16023969 intergenic not near genes chr3R_12_16020001 chr3R_16020001 RAL-892 2006 chr3R 16033410 16033429 chr3R 16033511 16033530 9 101 3.5 6.5 5.0 1.5 120 chr3R 16033410 intron pnr + chr3R 16033470 intron pnr + chr3R 16033530 intron pnr + chr3R_9_16030001 chr3R_16030001 RAL-892 2007 chr3R 16225070 16225102 chr3R 16225175 16225207 4 105 21.0 22.0 21.5 0.2 137 chr3R 16225070 intergenic not near genes chr3R 16225138 intergenic not near genes chr3R 16225207 intergenic tara + chr3R_4_16225001 chr3R_16225001 RAL-892 2008 chr3R 16244244 16244287 chr3R 16244376 16244416 14 132 9.0 5.5 7.2 1.7 172 chr3R 16244244 intron tara + chr3R 16244330 intron tara + chr3R 16244416 intron tara + chr3R_14_16240001 chr3R_16240001 RAL-892 2009 chr3R 16284870 16284922 chr3R 16284969 16285020 8 93 5.0 7.0 6.0 1.1 150 chr3R 16284870 intron gish + chr3R 16284945 intron gish + chr3R 16285020 intron gish + chr3R_8_16280001 chr3R_16280001 RAL-892 2010 chr3R 16374280 16374325 chr3R 16374417 16374462 11 137 3.0 6.0 4.5 2.0 182 chr3R 16374280 intergenic ss - chr3R 16374371 intergenic ss - chr3R 16374462 3` UTR ss - chr3R_11_16370001 chr3R_16370001 RAL-892 2011 chr3R 16447309 16447346 chr3R 16447416 16447447 10 105 14.5 14.5 14.5 0.6 138 chr3R 16447309 intron Pak3 - chr3R 16447378 intron Pak3 - chr3R 16447447 intron Pak3 - chr3R_10_16445001 chr3R_16445001 RAL-892 2012 chr3R 16521187 16521226 chr3R 16521292 16521331 12 105 18.0 16.0 17.0 0.7 144 chr3R 16521187 intron CG42342 + chr3R 16521259 intron CG42342 + chr3R 16521331 intron CG42342 + chr3R_12_16520001 chr3R_16520001 RAL-892 2013 chr3R 16582895 16582919 chr3R 16582986 16583016 5 97 4.5 2.5 3.5 1.1 121 chr3R 16582895 intron Scp2 - chr3R 16582956 intron Scp2 - chr3R 16583016 intron Scp2 - chr3R_5_16580001 chr3R_16580001 RAL-892 2014 chr3R 16607425 16607451 chr3R 16607583 16607606 4 154 10.0 9.5 9.8 0.4 181 chr3R 16607425 intergenic not near genes chr3R 16607516 intergenic not near genes chr3R 16607606 intergenic not near genes chr3R_4_16605001 chr3R_16605001 RAL-892 2015 chr3R 11412337 11412340 chr3R 16611513 16611516 4 5199176 18.0 19.0 18.5 0.2 5199179 chr3R 11412337 3` UTR Irbp + chr3R 14011926 intron rdx - chr3R 16611516 3` UTR CG12783 - chr3R_4_14010001 chr3R_14010001 RAL-892 2016 chr3R 16706270 16706291 chr3R 16706664 16706695 5 413 8.5 7.0 7.8 0.6 425 chr3R 16706270 intron Ubx - chr3R 16706482 intron Ubx - chr3R 16706695 intron Ubx - chr3R_5_16705001 chr3R_16705001 RAL-892 2017 chr3R 16731926 16732058 chr3R 16732020 16732155 8 98 8.0 2.5 5.2 1.3 229 chr3R 16731926 intron Ubx - chr3R 16732040 intron Ubx - chr3R 16732155 intron Ubx - chr3R_8_16730001 chr3R_16730001 RAL-892 2018 chr3R 16734858 16734897 chr3R 16734961 16735000 7 103 4.5 8.0 6.2 1.0 142 chr3R 16734858 intergenic Ubx - chr3R 16734929 intergenic not near genes chr3R 16735000 intergenic not near genes chr3R_7_16730001 chr3R_16730001 RAL-892 2019 chr3R 16756304 16756340 chr3R 16762511 16762538 diver 11 6208 2.5 1.0 1.8 3.9 6234 chr3R 16756304 intron bxd - chr3R 16759421 intron bxd - chr3R 16762538 intron bxd - chr3R_11_16755001 chr3R_16755001 RAL-892 2020 chr3R 16860318 16860365 chr3R 16860416 16860463 11 98 1.0 1.0 1.0 5.5 145 chr3R 16860318 intron iab-8 - chr3R 16860390 intron iab-8 - chr3R 16860463 intron iab-8 - chr3R_11_16860001 chr3R_16860001 RAL-892 2021 chr3R 17179262 17179303 chr3R 17179366 17179407 5 104 11.5 13.5 12.5 0.4 145 chr3R 17179262 intron Mur89F - chr3R 17179334 intron Mur89F - chr3R 17179407 intron Mur89F - chr3R_5_17175001 chr3R_17175001 RAL-892 2022 chr3R 17184717 17184756 chr3R 17184813 17184852 18 96 5.0 2.0 3.5 4.0 135 chr3R 17184717 intron Mur89F - chr3R 17184784 intron Mur89F - chr3R 17184852 intron Mur89F - chr3R_18_17180001 chr3R_17180001 RAL-892 2023 chr3R 17194403 17194421 chr3R 17194501 17194510 6 95 3.5 5.0 4.2 1.2 107 chr3R 17194403 intron Mur89F - chr3R 17194456 intron Mur89F - chr3R 17194510 intron Mur89F - chr3R_6_17190001 chr3R_17190001 RAL-892 2024 chr3R 17209687 17209709 chr3R 17209795 17209817 6 105 9.0 9.0 9.0 0.6 130 chr3R 17209687 intergenic not near genes chr3R 17209752 intergenic not near genes chr3R 17209817 intergenic not near genes chr3R_6_17205001 chr3R_17205001 RAL-892 2025 chr3R 17268661 17268666 chr3R 17268803 17268808 4 142 3.5 7.0 5.2 0.6 147 chr3R 17268661 intergenic not near genes chr3R 17268734 intergenic not near genes chr3R 17268808 intergenic not near genes chr3R_4_17265001 chr3R_17265001 RAL-892 2026 chr3R 17268667 17268695 chr3R 17268799 17268837 10 140 3.5 5.5 4.5 1.8 170 chr3R 17268667 intergenic not near genes chr3R 17268752 intergenic not near genes chr3R 17268837 intergenic not near genes chr3R_10_17265001 chr3R_17265001 RAL-892 2027 chr3R 17273960 17274001 chr3R 17274077 17274128 13 126 6.5 12.0 9.2 1.3 168 chr3R 17273960 intergenic not near genes chr3R 17274044 intergenic not near genes chr3R 17274128 intergenic not near genes chr3R_13_17270001 chr3R_17270001 RAL-892 2028 chr3R 17294651 17294694 chr3R 17295099 17295142 BS 16 448 2.0 5.0 3.5 3.6 491 chr3R 17294651 intergenic not near genes chr3R 17294896 intergenic not near genes chr3R 17295142 intergenic not near genes chr3R_16_17290001 chr3R_17290001 RAL-892 2029 chr3R 17346672 17346715 chr3R 17348255 17348293 F-element 13 1581 5.0 5.5 5.2 2.1 1621 chr3R 17346672 intron beat-IIa - chr3R 17347482 intron beat-IIa - chr3R 17348293 intron beat-IIa - chr3R_13_17345001 chr3R_17345001 RAL-892 2030 chr3R 17353431 17353481 chr3R 17353527 17353578 7 94 9.0 10.5 9.8 0.6 147 chr3R 17353431 intron beat-IIa - chr3R 17353504 intron beat-IIa - chr3R 17353578 intron beat-IIa - chr3R_7_17350001 chr3R_17350001 RAL-892 2031 chr3R 17419380 17419396 chr3R 17419484 17419500 6 103 10.5 6.0 8.2 0.7 120 chr3R 17419380 intergenic CG42834 + chr3R 17419440 intergenic CG42834 + chr3R 17419500 intergenic CG42834 + chr3R_6_17415001 chr3R_17415001 RAL-892 2032 chr3R 17461182 17461222 chr3R 17461284 17461324 12 102 5.0 4.0 4.5 2.2 142 chr3R 17461182 intergenic not near genes chr3R 17461253 intergenic not near genes chr3R 17461324 intergenic not near genes chr3R_12_17460001 chr3R_17460001 RAL-892 2033 chr3R 17497945 17497992 chr3R 17498051 17498098 5 105 4.0 6.0 5.0 0.8 153 chr3R 17497945 intron Dscam3 - chr3R 17498022 intron Dscam3 - chr3R 17498098 intron Dscam3 - chr3R_5_17495001 chr3R_17495001 RAL-892 2034 chr3R 17498850 17498873 chr3R 17499012 17499035 9 161 11.0 16.5 13.8 0.6 185 chr3R 17498850 intron Dscam3 - chr3R 17498942 intron Dscam3 - chr3R 17499035 intron Dscam3 - chr3R_9_17495001 chr3R_17495001 RAL-892 2035 chr3R 17503301 17503340 chr3R 17503445 17503485 6 140 7.0 10.0 8.5 0.6 184 chr3R 17503301 intron Dscam3 - chr3R 17503393 intron Dscam3 - chr3R 17503485 intron Dscam3 - chr3R_6_17500001 chr3R_17500001 RAL-892 2036 chr3R 17522192 17522228 chr3R 17522305 17522322 6 107 6.5 0.0 3.2 1.4 130 chr3R 17522192 intergenic not near genes chr3R 17522257 intergenic not near genes chr3R 17522322 intergenic not near genes chr3R_6_17520001 chr3R_17520001 RAL-892 2037 chr3R 17634357 17634408 chr3R 17634449 17634499 6 90 8.0 10.5 9.2 0.6 142 chr3R 17634357 intron CG43175 + chr3R 17634428 intron CG43175 + chr3R 17634499 intron CG43175 + chr3R_6_17630001 chr3R_17630001 RAL-892 2038 chr3R 17638305 17638347 chr3R 17638811 17638853 roo 8 506 1.5 7.0 4.2 1.5 548 chr3R 17638305 intron CG43175 + chr3R 17638579 intron CG43175 + chr3R 17638853 intron,intron CG43175 +,CR45222 + chr3R_8_17635001 chr3R_17635001 RAL-892 2039 chr3R 17645683 17645709 chr3R 17645833 17645859 6 150 12.5 12.0 12.2 0.5 176 chr3R 17645683 intergenic CG43175 + chr3R 17645771 intergenic not near genes chr3R 17645859 intergenic not near genes chr3R_6_17645001 chr3R_17645001 RAL-892 2040 chr3R 17734823 17734859 chr3R 17734956 17734992 12 133 4.5 3.0 3.8 2.5 169 chr3R 17734823 intergenic CG14321 + chr3R 17734908 intergenic not near genes chr3R 17734992 intergenic not near genes chr3R_12_17730001 chr3R_17730001 RAL-892 2041 chr3R 17739193 17739215 chr3R 17739265 17739317 4 84 13.5 9.5 11.5 0.3 124 chr3R 17739193 intron TyrRII + chr3R 17739255 intron TyrRII + chr3R 17739317 intron TyrRII + chr3R_4_17735001 chr3R_17735001 RAL-892 2042 chr3R 17773375 17773393 chr3R 17773475 17773489 7 99 3.0 4.5 3.8 1.5 114 chr3R 17773375 intron CG43102 - chr3R 17773432 intron CG43102 - chr3R 17773489 exon CG43102 - chr3R_7_17770001 chr3R_17770001 RAL-892 2043 chr3R 17823177 17823234 chr3R 17823274 17823300 20 95 6.0 6.5 6.2 2.8 123 chr3R 17823177 intron tinc + chr3R 17823238 intron tinc + chr3R 17823300 intron tinc + chr3R_20_17820001 chr3R_17820001 RAL-892 2044 chr3R 17845206 17845216 chr3R 17845303 17845311 4 96 3.0 13.5 8.2 0.4 105 chr3R 17845206 intron tinc + chr3R 17845258 intron tinc + chr3R 17845311 intron tinc + chr3R_4_17845001 chr3R_17845001 RAL-892 2045 chr3R 17856860 17856912 chr3R 17856973 17857005 16 112 4.0 4.0 4.0 3.2 145 chr3R 17856860 intron tinc + chr3R 17856932 intron tinc + chr3R 17857005 intron tinc + chr3R_16_17855001 chr3R_17855001 RAL-892 2046 chr3R 17899074 17899085 chr3R 17899172 17899183 4 98 9.0 5.0 7.0 0.5 109 chr3R 17899074 intron Rim - chr3R 17899128 intron Rim - chr3R 17899183 intron Rim - chr3R_4_17895001 chr3R_17895001 RAL-892 2047 chr3R 17911122 17911167 chr3R 17911220 17911268 10 100 3.5 4.5 4.0 2.0 146 chr3R 17911122 intron Rim - chr3R 17911195 intron Rim - chr3R 17911268 intron Rim - chr3R_10_17910001 chr3R_17910001 RAL-892 2048 chr3R 17925868 17925889 chr3R 17927337 17927340 hobo 7 1477 2.5 4.0 3.2 1.7 1472 chr3R 17925868 intron cpo + chr3R 17926604 intron cpo + chr3R 17927340 intron cpo + chr3R_7_17925001 chr3R_17925001 RAL-892 2049 chr3R 18030458 18030481 chr3R 18030562 18030585 5 104 4.0 7.5 5.8 0.7 127 chr3R 18030458 intergenic not near genes chr3R 18030522 intergenic not near genes chr3R 18030585 intergenic not near genes chr3R_5_18030001 chr3R_18030001 RAL-892 2050 chr3R 18061431 18061450 chr3R 18061542 18061562 5 112 4.0 0.0 2.0 1.7 131 chr3R 18061431 intergenic not near genes chr3R 18061496 intergenic not near genes chr3R 18061562 intergenic not near genes chr3R_5_18060001 chr3R_18060001 RAL-892 2051 chr3R 18067959 18068022 chr3R 18068075 18068124 11 110 0.0 4.0 2.0 3.7 165 chr3R 18067959 intergenic not near genes chr3R 18068042 intergenic not near genes chr3R 18068124 intergenic not near genes chr3R_11_18065001 chr3R_18065001 RAL-892 2052 chr3R 18078134 18078172 chr3R 18078233 18078270 6 98 7.5 5.0 6.2 0.8 136 chr3R 18078134 intergenic not near genes chr3R 18078202 intergenic not near genes chr3R 18078270 intergenic not near genes chr3R_6_18075001 chr3R_18075001 RAL-892 2053 chr3R 18098276 18098290 chr3R 18098373 18098387 7 96 0.5 0.0 0.2 5.8 111 chr3R 18098276 intron sr + chr3R 18098332 intron sr + chr3R 18098387 intron sr + chr3R_7_18095001 chr3R_18095001 RAL-892 2054 chr3R 18122882 18122913 chr3R 18122979 18123010 5 97 2.5 3.5 3.0 1.2 128 chr3R 18122882 intron sr + chr3R 18122946 intron sr + chr3R 18123010 intron sr + chr3R_5_18120001 chr3R_18120001 RAL-892 2055 chr3R 18125176 18125203 chr3R 18125289 18125315 11 111 3.5 4.5 4.0 2.2 139 chr3R 18125176 intron sr + chr3R 18125246 intron sr + chr3R 18125315 intron sr + chr3R_11_18125001 chr3R_18125001 RAL-892 2056 chr3R 18143539 18143588 chr3R 18143648 18143697 13 109 3.5 3.5 3.5 2.9 158 chr3R 18143539 intergenic not near genes chr3R 18143618 intergenic not near genes chr3R 18143697 intergenic not near genes chr3R_13_18140001 chr3R_18140001 RAL-892 2057 chr3R 18322825 18322875 chr3R 18322944 18322994 7 112 2.5 4.0 3.2 1.7 169 chr3R 18322825 intron CG31235 - chr3R 18322910 intron CG31235 - chr3R 18322994 intron CG31235 - chr3R_7_18320001 chr3R_18320001 RAL-892 2058 chr3R 18328568 18328590 chr3R 18328664 18328672 4 90 1.5 3.5 2.5 1.1 104 chr3R 18328568 intron CG31235 - chr3R 18328620 intron CG31235 - chr3R 18328672 intron CG31235 - chr3R_4_18325001 chr3R_18325001 RAL-892 2059 chr3R 18331764 18331769 chr3R 18333278 18333283 hopper2 4 1514 15.0 2.0 8.5 0.4 1519 chr3R 18331764 3` UTR CG15803 - chr3R 18332524 intron CG15803 - chr3R 18333283 3` UTR CG15803 - chr3R_4_18330001 chr3R_18330001 RAL-892 2060 chr3R 18449376 18449424 chr3R 18449473 18449521 13 97 6.0 8.0 7.0 1.6 145 chr3R 18449376 intron fru - chr3R 18449448 intron fru - chr3R 18449521 intron fru - chr3R_13_18445001 chr3R_18445001 RAL-892 2061 chr3R 18472276 18472299 chr3R 18472397 18472420 8 121 1.5 4.0 2.8 2.1 144 chr3R 18472276 intron fru - chr3R 18472348 intron fru - chr3R 18472420 intron fru - chr3R_8_18470001 chr3R_18470001 RAL-892 2062 chr3R 18473231 18473236 chr3R 18473338 18473343 5 107 0.5 0.0 0.2 4.2 112 chr3R 18473231 intron fru - chr3R 18473287 intron fru - chr3R 18473343 intron fru - chr3R_5_18470001 chr3R_18470001 RAL-892 2063 chr3R 18500721 18500734 chr3R 18500862 18500875 10 140 4.0 4.5 4.2 1.9 154 chr3R 18500721 intron fru - chr3R 18500798 intron fru - chr3R 18500875 intron fru - chr3R_10_18500001 chr3R_18500001 RAL-892 2064 chr3R 18606494 18606529 chr3R 18610734 18610781 F-element 9 4251 2.5 4.5 3.5 2.0 4287 chr3R 18606494 intron,intron qin +,CG14304 - chr3R 18608638 intron,intron qin +,CG14304 - chr3R 18610781 intron,intron qin +,CG14304 - chr3R_9_18605001 chr3R_18605001 RAL-892 2065 chr3R 18618246 18618295 chr3R 18618350 18618399 21 105 2.0 1.5 1.8 7.5 153 chr3R 18618246 intron,intron qin +,CG14304 - chr3R 18618322 intron,intron qin +,CG14304 - chr3R 18618399 intron,intron qin +,CG14304 - chr3R_21_18615001 chr3R_18615001 RAL-892 2066 chr3R 18695741 18695764 chr3R 18695845 18695858 6 102 6.5 0.0 3.2 1.4 117 chr3R 18695741 3` UTR CG34282 + chr3R 18695800 intergenic CG34282 + chr3R 18695858 intergenic CG34282 + chr3R_6_18695001 chr3R_18695001 RAL-892 2067 chr3R 18720287 18720340 chr3R 18720403 18720455 17 115 2.0 4.5 3.2 4.0 168 chr3R 18720287 intron Cha + chr3R 18720371 intron Cha + chr3R 18720455 intron Cha + chr3R_17_18720001 chr3R_18720001 RAL-892 2068 chr3R 18770272 18770321 chr3R 18770374 18770423 13 102 4.0 3.5 3.8 2.7 151 chr3R 18770272 intron CG7720 - chr3R 18770348 intron CG7720 - chr3R 18770423 intron CG7720 - chr3R_13_18770001 chr3R_18770001 RAL-892 2069 chr3R 18781671 18781711 chr3R 18781767 18781791 5 93 5.0 3.5 4.2 1.0 120 chr3R 18781671 intron CG7720 - chr3R 18781731 intron CG7720 - chr3R 18781791 intron CG7720 - chr3R_5_18780001 chr3R_18780001 RAL-892 2070 chr3R 18792797 18792834 chr3R 18792900 18792937 9 103 3.5 0.0 1.8 3.2 140 chr3R 18792797 intron CG7720 - chr3R 18792867 intron CG7720 - chr3R 18792937 intron CG7720 - chr3R_9_18790001 chr3R_18790001 RAL-892 2071 chr3R 18807310 18807332 chr3R 18807406 18807427 5 94 2.5 0.0 1.2 2.3 117 chr3R 18807310 intron CG18208 - chr3R 18807368 intron CG18208 - chr3R 18807427 intron CG18208 - chr3R_5_18805001 chr3R_18805001 RAL-892 2072 chr3R 18812062 18812099 chr3R 18812160 18812197 12 98 3.0 5.0 4.0 2.4 135 chr3R 18812062 intron CG18208 - chr3R 18812130 intron CG18208 - chr3R 18812197 intron CG18208 - chr3R_12_18810001 chr3R_18810001 RAL-892 2073 chr3R 18836812 18836861 chr3R 18836942 18836991 20 128 4.0 2.5 3.2 4.8 179 chr3R 18836812 intron CG18208 - chr3R 18836902 intron CG18208 - chr3R 18836991 intron CG18208 - chr3R_20_18835001 chr3R_18835001 RAL-892 2074 chr3R 19136406 19136459 chr3R 19139772 19139872 Bari1 21 3376 68.0 42.0 55.0 0.4 3466 chr3R 19136406 exon Cyp12a4 + chr3R 19138139 intergenic not near genes chr3R 19139872 3` UTR Ppcs - chr3R_21_19135001 chr3R_19135001 RAL-892 2075 chr3R 19140271 19140290 chr3R 19140714 19140758 7 455 3.5 1.5 2.5 2.0 487 chr3R 19140271 3` UTR Ppcs - chr3R 19140514 3` UTR Ppcs - chr3R 19140758 3` UTR Ppcs - chr3R_7_19140001 chr3R_19140001 RAL-892 2076 chr3R 19375921 19375974 chr3R 19376024 19376093 9 114 3.0 0.0 1.5 3.6 172 chr3R 19375921 intron,exon Ino80 -,CG31404 - chr3R 19376007 intron,5` UTR Ino80 -,CG31404 - chr3R 19376093 intron Ino80 - chr3R_9_19375001 chr3R_19375001 RAL-892 2077 chr3R 19417531 19417558 chr3R 19417639 19417676 6 113 0.0 1.5 0.8 3.3 145 chr3R 19417531 intron CG31221 + chr3R 19417604 intron CG31221 + chr3R 19417676 intron CG31221 + chr3R_6_19415001 chr3R_19415001 RAL-892 2078 chr3R 19431494 19431497 chr3R 19431598 19431601 5 104 0.0 5.0 2.5 1.4 107 chr3R 19431494 intron CG31221 + chr3R 19431548 intron CG31221 + chr3R 19431601 intron CG31221 + chr3R_5_19430001 chr3R_19430001 RAL-892 2079 chr3R 19490427 19490471 chr3R 19490536 19490575 15 109 3.0 2.5 2.8 3.9 148 chr3R 19490427 intron,exon Dys +,CG15025 - chr3R 19490501 intron,intron Dys +,CG15025 - chr3R 19490575 intron,exon Dys +,CG15025 - chr3R_15_19490001 chr3R_19490001 RAL-892 2080 chr3R 19494393 19494413 chr3R 19494493 19494513 5 100 4.0 5.5 4.8 0.9 120 chr3R 19494393 intron Dys + chr3R 19494453 intron Dys + chr3R 19494513 intron Dys + chr3R_5_19490001 chr3R_19490001 RAL-892 2081 chr3R 19505917 19505965 chr3R 19506035 19506084 16 116 3.0 3.5 3.2 3.8 167 chr3R 19505917 exon Dys + chr3R 19506000 intron Dys + chr3R 19506084 intron Dys + chr3R_16_19505001 chr3R_19505001 RAL-892 2082 chr3R 19533271 19533320 chr3R 19533371 19533421 8 101 0.5 1.0 0.8 4.4 150 chr3R 19533271 intron Dys + chr3R 19533346 intron Dys + chr3R 19533421 intron Dys + chr3R_8_19530001 chr3R_19530001 RAL-892 2083 chr3R 19556424 19556430 chr3R 19557434 19557438 4 1009 10.0 14.5 12.2 0.3 1014 chr3R 19556424 intron Dys + chr3R 19556931 intron Dys + chr3R 19557438 intron Dys + chr3R_4_19555001 chr3R_19555001 RAL-892 2084 chr3R 19556431 19556447 chr3R 19557421 19557446 6 997 11.5 12.5 12.0 0.5 1015 chr3R 19556431 intron Dys + chr3R 19556938 intron Dys + chr3R 19557446 intron Dys + chr3R_6_19555001 chr3R_19555001 RAL-892 2085 chr3R 19556198 19556225 chr3R 19557763 19557790 12 1565 29.0 17.5 23.2 0.5 1592 chr3R 19556198 intron Dys + chr3R 19556994 intron Dys + chr3R 19557790 intron Dys + chr3R_12_19555001 chr3R_19555001 RAL-892 2086 chr3R 19564971 19564998 chr3R 19565070 19565097 6 99 3.0 3.5 3.2 1.4 126 chr3R 19564971 intron Dys + chr3R 19565034 intron Dys + chr3R 19565097 intron Dys + chr3R_6_19565001 chr3R_19565001 RAL-892 2087 chr3R 19584350 19584398 chr3R 19584461 19584509 11 111 3.5 4.0 3.8 2.3 159 chr3R 19584350 intron Dys + chr3R 19584430 intron Dys + chr3R 19584509 intron Dys + chr3R_11_19580001 chr3R_19580001 RAL-892 2088 chr3R 19602737 19602781 chr3R 19602835 19602879 12 98 7.0 3.0 5.0 2.0 142 chr3R 19602737 intergenic CG7333 + chr3R 19602808 intergenic CG7333 + chr3R 19602879 intergenic CG7333 +,CG7342 + chr3R_12_19600001 chr3R_19600001 RAL-892 2089 chr3R 19607035 19607064 chr3R 19608059 19608089 12 1024 28.5 20.5 24.5 0.5 1054 chr3R 19607035 intergenic CG17751 + chr3R 19607562 intron CG17751 + chr3R 19608089 intron CG17751 + chr3R_12_19605001 chr3R_19605001 RAL-892 2090 chr3R 19606536 19606576 chr3R 19609629 19609669 12 3093 24.0 30.5 27.2 0.4 3133 chr3R 19606536 intergenic CG7342 + chr3R 19608102 intron CG17751 + chr3R 19609669 intergenic CG17751 + chr3R_12_19605001 chr3R_19605001 RAL-892 2091 chr3R 19702311 19702354 chr3R 19702408 19702456 13 98 4.5 3.5 4.0 2.6 145 chr3R 19702311 intergenic not near genes chr3R 19702384 intergenic not near genes chr3R 19702456 intergenic not near genes chr3R_13_19700001 chr3R_19700001 RAL-892 2092 chr3R 19755406 19755457 chr3R 19755521 19755571 14 109 2.5 2.5 2.5 4.0 165 chr3R 19755406 intron GluClalpha + chr3R 19755488 intron GluClalpha + chr3R 19755571 intron GluClalpha + chr3R_14_19755001 chr3R_19755001 RAL-892 2093 chr3R 19827506 19827558 chr3R 19827612 19827664 6 106 2.0 1.5 1.8 2.1 158 chr3R 19827506 intron bnl - chr3R 19827585 intron bnl - chr3R 19827664 exon bnl - chr3R_6_19825001 chr3R_19825001 RAL-892 2094 chr3R 19908274 19908302 chr3R 19908378 19908406 10 104 0.0 6.5 3.2 2.4 132 chr3R 19908274 intron RhoGAP92B + chr3R 19908340 intron RhoGAP92B + chr3R 19908406 intron,3` UTR RhoGAP92B +,CR45048 - chr3R_10_19905001 chr3R_19905001 RAL-892 2095 chr3R 19913991 19914043 chr3R 19914104 19914156 17 113 6.5 4.0 5.2 2.7 165 chr3R 19913991 3` UTR RhoGAP92B + chr3R 19914074 3` UTR RhoGAP92B + chr3R 19914156 3` UTR RhoGAP92B + chr3R_17_19910001 chr3R_19910001 RAL-892 2096 chr3R 19955328 19955378 chr3R 19955449 19955499 12 121 4.0 3.0 3.5 2.7 171 chr3R 19955328 intron Hs6st - chr3R 19955414 intron Hs6st - chr3R 19955499 intron Hs6st - chr3R_12_19955001 chr3R_19955001 RAL-892 2097 chr3R 19989836 19989858 chr3R 19989926 19989951 8 95 9.5 1.5 5.5 1.2 115 chr3R 19989836 intron Hs6st - chr3R 19989894 intron Hs6st - chr3R 19989951 intron Hs6st - chr3R_8_19985001 chr3R_19985001 RAL-892 2098 chr3R 20066101 20066147 chr3R 20066311 20066356 11 210 4.0 0.0 2.0 3.7 255 chr3R 20066101 intergenic not near genes chr3R 20066228 intergenic not near genes chr3R 20066356 intergenic not near genes chr3R_11_20065001 chr3R_20065001 RAL-892 2099 chr3R 20066539 20066578 chr3R 20066795 20066834 14 255 4.0 5.0 4.5 2.5 295 chr3R 20066539 intergenic not near genes chr3R 20066686 intergenic not near genes chr3R 20066834 intergenic not near genes chr3R_14_20065001 chr3R_20065001 RAL-892 2100 chr3R 20077032 20077068 chr3R 20077128 20077174 9 105 2.0 4.0 3.0 2.2 142 chr3R 20077032 intergenic not near genes chr3R 20077103 intergenic not near genes chr3R 20077174 intergenic not near genes chr3R_9_20075001 chr3R_20075001 RAL-892 2101 chr3R 20109542 20109567 chr3R 20114768 20114787 copia 11 5225 0.5 10.5 5.5 1.7 5245 chr3R 20109542 intergenic not near genes chr3R 20112164 intergenic not near genes chr3R 20114787 intergenic CG10887 + chr3R_11_20110001 chr3R_20110001 RAL-892 2102 chr3R 20156675 20156715 chr3R 20165865 20165905 roo 13 9188 3.5 5.5 4.5 2.4 9230 chr3R 20156675 intergenic not near genes chr3R 20161290 intergenic not near genes chr3R 20165905 intergenic not near genes chr3R_13_20160001 chr3R_20160001 RAL-892 2103 chr3R 20180695 20180720 chr3R 20180800 20180825 9 105 7.5 7.0 7.2 1.1 130 chr3R 20180695 intergenic not near genes chr3R 20180760 intergenic not near genes chr3R 20180825 intergenic not near genes chr3R_9_20180001 chr3R_20180001 RAL-892 2104 chr3R 20184564 20184598 chr3R 20184673 20184706 6 103 3.0 7.0 5.0 1.0 142 chr3R 20184564 intergenic not near genes chr3R 20184635 intergenic not near genes chr3R 20184706 intergenic not near genes chr3R_6_20180001 chr3R_20180001 RAL-892 2105 chr3R 20195226 20195249 chr3R 20195314 20195334 7 91 4.5 1.5 3.0 1.8 108 chr3R 20195226 intergenic not near genes chr3R 20195280 intergenic not near genes chr3R 20195334 intergenic not near genes chr3R_7_20195001 chr3R_20195001 RAL-892 2106 chr3R 20197093 20197149 chr3R 20197190 20197207 19 94 3.5 2.0 2.8 5.0 114 chr3R 20197093 intergenic not near genes chr3R 20197150 intergenic not near genes chr3R 20197207 intergenic not near genes chr3R_19_20195001 chr3R_20195001 RAL-892 2107 chr3R 20205551 20205593 chr3R 20205693 20205735 14 142 5.5 5.5 5.5 2.2 184 chr3R 20205551 intron Nlg4 + chr3R 20205643 intron Nlg4 + chr3R 20205735 intron Nlg4 + chr3R_14_20205001 chr3R_20205001 RAL-892 2108 chr3R 20245259 20245305 chr3R 20248889 20248935 F-element 13 3630 2.5 0.5 1.5 5.2 3676 chr3R 20245259 3` UTR Nlg4 + chr3R 20247097 intergenic not near genes chr3R 20248935 intergenic not near genes chr3R_13_20245001 chr3R_20245001 RAL-892 2109 chr3R 20266502 20266541 chr3R 20272993 20273032 Burdock 13 6491 0.0 6.0 3.0 3.2 6530 chr3R 20266502 intron cic + chr3R 20269767 intron cic + chr3R 20273032 intron cic + chr3R_13_20265001 chr3R_20265001 RAL-892 2110 chr3R 20282259 20282307 chr3R 20282355 20282403 11 96 2.5 5.5 4.0 2.2 144 chr3R 20282259 intron cic + chr3R 20282331 intron cic + chr3R 20282403 intron cic + chr3R_11_20280001 chr3R_20280001 RAL-892 2111 chr3R 20308173 20308214 chr3R 20308276 20308333 5 111 4.5 0.0 2.2 1.6 160 chr3R 20308173 intergenic not near genes chr3R 20308253 intergenic not near genes chr3R 20308333 intergenic not near genes chr3R_5_20305001 chr3R_20305001 RAL-892 2112 chr3R 20330983 20331031 chr3R 20331489 20331537 roo 12 506 3.5 6.0 4.8 2.1 554 chr3R 20330983 intergenic Sirt2 + chr3R 20331260 intergenic Sirt2 + chr3R 20331537 intergenic not near genes chr3R_12_20330001 chr3R_20330001 RAL-892 2113 chr3R 20434824 20434849 chr3R 20435029 20435054 7 205 3.0 3.0 3.0 1.8 230 chr3R 20434824 intron Gfrl - chr3R 20434939 intron Gfrl - chr3R 20435054 intron Gfrl - chr3R_7_20430001 chr3R_20430001 RAL-892 2114 chr3R 20467063 20467107 chr3R 20467158 20467203 5 86 3.0 1.5 2.2 1.6 140 chr3R 20467063 intron Gfrl - chr3R 20467133 intron Gfrl - chr3R 20467203 intron Gfrl - chr3R_5_20465001 chr3R_20465001 RAL-892 2115 chr3R 20487919 20487941 chr3R 20488047 20488049 7 124 4.5 3.0 3.8 1.5 130 chr3R 20487919 intergenic not near genes chr3R 20487984 intergenic not near genes chr3R 20488049 intergenic not near genes chr3R_7_20485001 chr3R_20485001 RAL-892 2116 chr3R 20503427 20503445 chr3R 20504120 20504148 6 704 2.5 2.0 2.2 1.9 721 chr3R 20503427 exon MtnB - chr3R 20503788 intergenic MtnB - chr3R 20504148 intergenic not near genes chr3R_6_20500001 chr3R_20500001 RAL-892 2117 chr3R 20512973 20513032 chr3R 20515707 20515755 opus 6 2724 0.0 4.5 2.2 1.9 2782 chr3R 20512973 intergenic not near genes chr3R 20514364 intergenic not near genes chr3R 20515755 intergenic not near genes chr3R_6_20510001 chr3R_20510001 RAL-892 2118 chr3R 20594462 20594512 chr3R 20594571 20594622 18 110 3.5 0.0 1.8 6.4 160 chr3R 20594462 intron bon + chr3R 20594542 intron bon + chr3R 20594622 intron bon + chr3R_18_20590001 chr3R_20590001 RAL-892 2119 chr3R 20634676 20634720 chr3R 20634776 20634820 11 98 3.0 4.0 3.5 2.4 144 chr3R 20634676 5` UTR Pi3K92E - chr3R 20634748 intergenic Pi3K92E - chr3R 20634820 intergenic Pi3K92E - chr3R_11_20630001 chr3R_20630001 RAL-892 2120 chr3R 20730927 20730946 chr3R 20731038 20731057 4 111 6.0 0.5 3.2 1.0 130 chr3R 20730927 intergenic not near genes chr3R 20730992 intergenic not near genes chr3R 20731057 intergenic not near genes chr3R_4_20730001 chr3R_20730001 RAL-892 2121 chr3R 20767490 20767530 chr3R 20767603 20767646 5 115 3.5 4.0 3.8 1.0 156 chr3R 20767490 intron Syp + chr3R 20767568 intron Syp + chr3R 20767646 intron Syp + chr3R_5_20765001 chr3R_20765001 RAL-892 2122 chr3R 20784573 20784622 chr3R 20784697 20784700 5 111 4.5 1.5 3.0 1.2 127 chr3R 20784573 intron Syp + chr3R 20784636 intron Syp + chr3R 20784700 intron Syp + chr3R_5_20780001 chr3R_20780001 RAL-892 2123 chr3R 20787421 20787454 chr3R 20787532 20787555 10 110 3.5 4.5 4.0 2.0 134 chr3R 20787421 intron Syp + chr3R 20787488 intron Syp + chr3R 20787555 intron Syp + chr3R_10_20785001 chr3R_20785001 RAL-892 2124 chr3R 20848341 20848357 chr3R 20848445 20848467 7 109 0.5 3.5 2.0 2.3 126 chr3R 20848341 intergenic not near genes chr3R 20848404 intergenic not near genes chr3R 20848467 intergenic not near genes chr3R_7_20845001 chr3R_20845001 RAL-892 2125 chr3R 20848699 20848745 chr3R 20848840 20848885 12 140 4.0 4.0 4.0 2.4 186 chr3R 20848699 intergenic not near genes chr3R 20848792 intergenic not near genes chr3R 20848885 intergenic not near genes chr3R_12_20845001 chr3R_20845001 RAL-892 2126 chr3R 20850069 20850108 chr3R 20850174 20850213 10 105 1.0 3.5 2.2 3.1 144 chr3R 20850069 intergenic RpS30 + chr3R 20850141 intergenic RpS30 + chr3R 20850213 intergenic RpS30 + chr3R_10_20850001 chr3R_20850001 RAL-892 2127 chr3R 20899894 20899941 chr3R 20900010 20900057 10 116 0.5 4.0 2.2 3.1 163 chr3R 20899894 intergenic not near genes chr3R 20899976 intergenic not near genes chr3R 20900057 intergenic not near genes chr3R_10_20895001 chr3R_20895001 RAL-892 2128 chr3R 20901644 20901657 chr3R 20901767 20901776 5 122 9.0 7.0 8.0 0.6 132 chr3R 20901644 intergenic CG5621 + chr3R 20901710 intergenic CG5621 + chr3R 20901776 intergenic CG5621 + chr3R_5_20900001 chr3R_20900001 RAL-892 2129 chr3R 20901663 20901681 chr3R 20901761 20901793 4 114 2.0 6.0 4.0 0.8 130 chr3R 20901663 intergenic CG5621 + chr3R 20901728 intergenic CG5621 + chr3R 20901793 intergenic CG5621 + chr3R_4_20900001 chr3R_20900001 RAL-892 2130 chr3R 20942793 20942803 chr3R 20942889 20942896 5 95 2.0 1.0 1.5 2.0 103 chr3R 20942793 intron CG31191 - chr3R 20942844 intron CG31191 - chr3R 20942896 intron CG31191 - chr3R_5_20940001 chr3R_20940001 RAL-892 2131 chr3R 20942804 20942842 chr3R 20942887 20942927 12 92 2.0 1.0 1.5 4.8 123 chr3R 20942804 intron CG31191 - chr3R 20942866 intron CG31191 - chr3R 20942927 intron CG31191 - chr3R_12_20940001 chr3R_20940001 RAL-892 2132 chr3R 21007936 21007970 chr3R 21008037 21008071 5 101 4.5 5.0 4.8 0.9 135 chr3R 21007936 intron Calx + chr3R 21008004 intron Calx + chr3R 21008071 intron Calx + chr3R_5_21005001 chr3R_21005001 RAL-892 2133 chr3R 21108020 21108059 chr3R 21108301 21108340 8 281 2.0 2.0 2.0 2.7 320 chr3R 21108020 intergenic Sec15 -,rtet + chr3R 21108180 intergenic Sec15 -,rtet + chr3R 21108340 intergenic rtet +,Sec15 - chr3R_8_21105001 chr3R_21105001 RAL-892 2134 chr3R 21129802 21130015 chr3R 21129911 21130112 12 98 0.5 0.0 0.2 10.0 310 chr3R 21129802 intergenic Obp93a -,CG5793 +,Ice2 + chr3R 21129957 intergenic Obp93a -,Ice2 +,CG5793 + chr3R 21130112 intergenic Ice2 +,Obp93a - chr3R_12_21125001 chr3R_21125001 RAL-892 2135 chr3R 21150787 21150837 chr3R 21150941 21150975 10 153 2.5 2.5 2.5 2.9 188 chr3R 21150787 intron SNF4Agamma + chr3R 21150881 intron SNF4Agamma + chr3R 21150975 intron SNF4Agamma + chr3R_10_21150001 chr3R_21150001 RAL-892 2136 chr3R 21154556 21154586 chr3R 21154791 21154821 7 234 4.5 4.5 4.5 1.3 265 chr3R 21154556 intron SNF4Agamma + chr3R 21154688 intron SNF4Agamma + chr3R 21154821 intron SNF4Agamma + chr3R_7_21150001 chr3R_21150001 RAL-892 2137 chr3R 21163246 21163254 chr3R 21163343 21163351 6 98 7.5 4.0 5.8 0.9 105 chr3R 21163246 intron SNF4Agamma + chr3R 21163298 intron SNF4Agamma + chr3R 21163351 intron SNF4Agamma + chr3R_6_21160001 chr3R_21160001 RAL-892 2138 chr3R 21163256 21163278 chr3R 21163331 21163365 4 86 3.0 1.5 2.2 1.2 109 chr3R 21163256 intron SNF4Agamma + chr3R 21163310 intron SNF4Agamma + chr3R 21163365 intron SNF4Agamma + chr3R_4_21160001 chr3R_21160001 RAL-892 2139 chr3R 21234793 21234837 chr3R 21234897 21234929 16 101 7.0 0.5 3.8 3.3 136 chr3R 21234793 intron e - chr3R 21234861 intron e - chr3R 21234929 intron e - chr3R_16_21230001 chr3R_21230001 RAL-892 2140 chr3R 21240425 21240477 chr3R 21240537 21240589 20 111 2.0 2.0 2.0 6.7 164 chr3R 21240425 intergenic not near genes chr3R 21240507 intergenic not near genes chr3R 21240589 intergenic not near genes chr3R_20_21240001 chr3R_21240001 RAL-892 2141 chr3R 21464384 21464404 chr3R 21464490 21464510 6 106 6.0 1.0 3.5 1.3 126 chr3R 21464384 intergenic not near genes chr3R 21464447 intergenic not near genes chr3R 21464510 intergenic not near genes chr3R_6_21460001 chr3R_21460001 RAL-892 2142 chr3R 21471996 21472030 chr3R 21472097 21472131 11 100 2.5 5.0 3.8 2.3 135 chr3R 21471996 intergenic not near genes chr3R 21472064 intergenic not near genes chr3R 21472131 intergenic not near genes chr3R_11_21470001 chr3R_21470001 RAL-892 2143 chr3R 21481368 21481375 chr3R 21481479 21481480 4 110 11.0 0.0 5.5 0.6 112 chr3R 21481368 intergenic not near genes chr3R 21481424 intergenic not near genes chr3R 21481480 intergenic not near genes chr3R_4_21480001 chr3R_21480001 RAL-892 2144 chr3R 21506854 21506912 chr3R 21506960 21507012 9 103 0.5 3.5 2.0 3.0 158 chr3R 21506854 intron C15 + chr3R 21506933 intron C15 + chr3R 21507012 intron C15 + chr3R_9_21505001 chr3R_21505001 RAL-892 2145 chr3R 21518009 21518272 chr3R 21518158 21518374 8 131 0.0 0.0 0.0 8.0 365 chr3R 21518009 intergenic not near genes chr3R 21518192 intergenic not near genes chr3R 21518374 intergenic not near genes chr3R_8_21515001 chr3R_21515001 RAL-892 2146 chr3R 21519968 21520132 chr3R 21520089 21520246 23 117 2.0 1.5 1.8 8.2 278 chr3R 21519968 intergenic not near genes chr3R 21520107 intergenic not near genes chr3R 21520246 intergenic not near genes chr3R_23_21520001 chr3R_21520001 RAL-892 2147 chr3R 21582980 21583018 chr3R 21583101 21583129 8 117 2.0 3.5 2.8 2.1 149 chr3R 21582980 intron InR - chr3R 21583054 intron InR - chr3R 21583129 intron InR - chr3R_8_21580001 chr3R_21580001 RAL-892 2148 chr3R 21586405 21586449 chr3R 21586509 21586545 10 100 3.0 6.0 4.5 1.8 140 chr3R 21586405 intron InR - chr3R 21586475 intron InR - chr3R 21586545 intron InR - chr3R_10_21585001 chr3R_21585001 RAL-892 2149 chr3R 21600254 21600271 chr3R 21600352 21600369 6 98 0.0 13.5 6.8 0.8 115 chr3R 21600254 intron InR - chr3R 21600312 intron InR - chr3R 21600369 intron InR - chr3R_6_21600001 chr3R_21600001 RAL-892 2150 chr3R 21725667 21725683 chr3R 21725823 21725839 4 156 0.0 9.5 4.8 0.7 172 chr3R 21725667 intergenic not near genes chr3R 21725753 intergenic not near genes chr3R 21725839 intergenic not near genes chr3R_4_21725001 chr3R_21725001 RAL-892 2151 chr3R 21784843 21784866 chr3R 21784961 21784984 12 117 5.5 0.0 2.8 3.2 141 chr3R 21784843 3` UTR,3` UTR CASK -,CRG - chr3R 21784914 3` UTR,3` UTR CASK -,CRG - chr3R 21784984 3` UTR,3` UTR CASK -,CRG - chr3R_12_21780001 chr3R_21780001 RAL-892 2152 chr3R 9620954 9620957 chr3R 21907534 21907534 4 12286578 23.5 19.0 21.2 0.2 12286580 chr3R 9620954 intron CG8312 + chr3R 15764244 intergenic not near genes chr3R 21907534 intergenic CG6678 + chr3R_4_15760001 chr3R_15760001 RAL-892 2153 chr3R 21337429 21337429 chr3R 21907534 21907534 4 570105 13.5 19.0 16.2 0.2 570105 chr3R 21337429 intron CG16791 - chr3R 21622482 intron E2f - chr3R 21907534 intergenic CG6678 + chr3R_4_21620001 chr3R_21620001 RAL-892 2154 chr3R 21907534 21907534 chr3R 28831801 28831803 7 6924268 19.0 10.0 14.5 0.5 6924269 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831803 intron WASp - chr3R_7_25365001 chr3R_25365001 RAL-892 2155 chr3R 21907535 21907535 chr3R 28831801 28831802 27 6924266 18.0 10.0 14.0 1.8 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_27_25365001 chr3R_25365001 RAL-892 2156 chr3R 21907536 21907536 chr3R 28831801 28831802 21 6924265 18.0 10.0 14.0 1.4 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_21_25365001 chr3R_25365001 RAL-892 2157 chr3R 21907536 21907536 chr3R 29013339 29013340 5 7105804 18.0 12.0 15.0 0.3 7105804 chr3R 21907536 intergenic CG6678 + chr3R 25460438 intron Fur1 - chr3R 29013340 intron wat - chr3R_5_25460001 chr3R_25460001 RAL-892 2158 chr3R 21985220 21985251 chr3R 21985345 21985376 14 125 6.5 7.5 7.0 1.8 156 chr3R 21985220 intron Eip93F + chr3R 21985298 intron Eip93F + chr3R 21985376 intron Eip93F + chr3R_14_21985001 chr3R_21985001 RAL-892 2159 chr3R 21989091 21989135 chr3R 21989235 21989279 6 144 1.5 0.0 0.8 3.3 188 chr3R 21989091 intron Eip93F + chr3R 21989185 intron Eip93F + chr3R 21989279 intron Eip93F + chr3R_6_21985001 chr3R_21985001 RAL-892 2160 chr3R 22084606 22084616 chr3R 22084706 22084723 6 106 0.5 4.5 2.5 1.7 117 chr3R 22084606 intergenic not near genes chr3R 22084664 intergenic not near genes chr3R 22084723 intergenic not near genes chr3R_6_22080001 chr3R_22080001 RAL-892 2161 chr3R 22239478 22239525 chr3R 22248558 22248593 roo 7 9073 2.0 0.0 1.0 3.5 9115 chr3R 22239478 intron SKIP + chr3R 22244036 intron SKIP + chr3R 22248593 intron SKIP + chr3R_7_22240001 chr3R_22240001 RAL-892 2162 chr3R 22331369 22331416 chr3R 22331480 22331517 23 110 6.0 6.5 6.2 3.2 148 chr3R 22331369 intron CG33721 + chr3R 22331443 exon CG33721 + chr3R 22331517 exon CG33721 + chr3R_23_22330001 chr3R_22330001 RAL-892 2163 chr3R 22428560 22428609 chr3R 22428656 22428705 11 90 3.0 3.5 3.2 2.6 145 chr3R 22428560 intron CG13847 - chr3R 22428632 intron CG13847 - chr3R 22428705 intron CG13847 - chr3R_11_22425001 chr3R_22425001 RAL-892 2164 chr3R 22450534 22450563 chr3R 22453194 22453222 NOF 7 2658 6.0 9.0 7.5 0.8 2688 chr3R 22450534 intron CG34376 + chr3R 22451878 intron CG34376 + chr3R 22453222 intron CG34376 + chr3R_7_22450001 chr3R_22450001 RAL-892 2165 chr3R 22536973 22537017 chr3R 22537092 22537116 23 118 2.0 3.5 2.8 6.1 143 chr3R 22536973 intron CG5326 - chr3R 22537044 intron CG5326 - chr3R 22537116 intron CG5326 - chr3R_23_22535001 chr3R_22535001 RAL-892 2166 chr3R 22782243 22782283 chr3R 22782339 22782379 11 95 6.0 2.0 4.0 2.2 136 chr3R 22782243 intron CG7029 + chr3R 22782311 intron CG7029 + chr3R 22782379 intron CG7029 + chr3R_11_22780001 chr3R_22780001 RAL-892 2167 chr3R 22842384 22842418 chr3R 22842493 22842535 9 117 4.0 3.0 3.5 2.0 151 chr3R 22842384 intergenic not near genes chr3R 22842460 intergenic not near genes chr3R 22842535 intergenic not near genes chr3R_9_22840001 chr3R_22840001 RAL-892 2168 chr3R 22853277 22853293 chr3R 22853369 22853390 5 92 5.5 5.0 5.2 0.8 113 chr3R 22853277 intergenic not near genes chr3R 22853334 intergenic not near genes chr3R 22853390 intergenic not near genes chr3R_5_22850001 chr3R_22850001 RAL-892 2169 chr3R 22877287 22877329 chr3R 22877434 22877467 5 142 2.0 4.5 3.2 1.2 180 chr3R 22877287 intergenic not near genes chr3R 22877377 intergenic not near genes chr3R 22877467 intergenic not near genes chr3R_5_22875001 chr3R_22875001 RAL-892 2170 chr3R 22881183 22881219 chr3R 22884909 22884945 Doc 5 3726 1.5 2.5 2.0 1.7 3762 chr3R 22881183 intergenic not near genes chr3R 22883064 intergenic not near genes chr3R 22884945 intergenic not near genes chr3R_5_22880001 chr3R_22880001 RAL-892 2171 chr3R 22954327 22954347 chr3R 22954422 22954445 6 95 7.5 9.5 8.5 0.6 118 chr3R 22954327 intron klg + chr3R 22954386 intron klg + chr3R 22954445 intron klg + chr3R_6_22950001 chr3R_22950001 RAL-892 2172 chr3R 22971225 22971273 chr3R 22971339 22971387 7 111 3.0 6.0 4.5 1.3 162 chr3R 22971225 intergenic not near genes chr3R 22971306 intergenic not near genes chr3R 22971387 intergenic not near genes chr3R_7_22970001 chr3R_22970001 RAL-892 2173 chr3R 23064171 23064200 chr3R 23064283 23064319 4 118 2.0 2.0 2.0 1.3 148 chr3R 23064171 exon CG17111 - chr3R 23064245 intron CG17111 - chr3R 23064319 exon CG17111 - chr3R_4_23060001 chr3R_23060001 RAL-892 2174 chr3R 23064867 23064892 chr3R 23064976 23065003 11 111 0.0 6.0 3.0 2.8 136 chr3R 23064867 intron CG17111 - chr3R 23064935 intron CG17111 - chr3R 23065003 intron CG17111 - chr3R_11_23060001 chr3R_23060001 RAL-892 2175 chr3R 23070639 23070700 chr3R 23070739 23070798 6 99 0.0 0.0 0.0 6.0 159 chr3R 23070639 3` UTR CG13830 - chr3R 23070718 3` UTR CG13830 - chr3R 23070798 3` UTR CG13830 - chr3R_6_23070001 chr3R_23070001 RAL-892 2176 chr3R 23073643 23073680 chr3R 23073752 23073789 9 109 3.5 1.0 2.2 2.8 146 chr3R 23073643 intron CG13830 - chr3R 23073716 intron CG13830 - chr3R 23073789 intron CG13830 - chr3R_9_23070001 chr3R_23070001 RAL-892 2177 chr3R 23100035 23100066 chr3R 23100151 23100192 12 122 7.0 5.5 6.2 1.7 157 chr3R 23100035 intron,exon CG13830 -,CG6738 + chr3R 23100114 intron,exon CG13830 -,CG6738 + chr3R 23100192 intron,exon CG13830 -,CG6738 + chr3R_12_23100001 chr3R_23100001 RAL-892 2178 chr3R 23182666 23182706 chr3R 23182769 23182806 11 101 2.5 2.0 2.2 3.4 140 chr3R 23182666 intron Irk1 + chr3R 23182736 intron Irk1 + chr3R 23182806 intron Irk1 + chr3R_11_23180001 chr3R_23180001 RAL-892 2179 chr3R 23197942 23197967 chr3R 23198039 23198066 6 98 4.5 3.5 4.0 1.2 124 chr3R 23197942 exon cnc - chr3R 23198004 intron cnc - chr3R 23198066 intron cnc - chr3R_6_23195001 chr3R_23195001 RAL-892 2180 chr3R 23245973 23246001 chr3R 23246075 23246098 5 100 3.0 2.0 2.5 1.4 125 chr3R 23245973 intron CG4467 - chr3R 23246036 intron CG4467 - chr3R 23246098 intron CG4467 - chr3R_5_23245001 chr3R_23245001 RAL-892 2181 chr3R 23319658 23319672 chr3R 23319757 23319771 7 98 0.0 3.0 1.5 2.8 113 chr3R 23319658 intron pnt - chr3R 23319714 intron pnt - chr3R 23319771 intron pnt - chr3R_7_23315001 chr3R_23315001 RAL-892 2182 chr3R 23421968 23422008 chr3R 23422073 23422093 6 99 2.5 5.5 4.0 1.2 125 chr3R 23421968 intron CG4374 - chr3R 23422030 intron CG4374 - chr3R 23422093 intron CG4374 - chr3R_6_23420001 chr3R_23420001 RAL-892 2183 chr3R 23558383 23558425 chr3R 23560184 23560226 Bari1 18 1800 2.5 3.5 3.0 4.5 1843 chr3R 23558383 intron beat-IV + chr3R 23559304 intron beat-IV + chr3R 23560226 intron beat-IV + chr3R_18_23555001 chr3R_23555001 RAL-892 2184 chr3R 23564423 23564475 chr3R 23564587 23564639 21 164 3.0 6.5 4.8 3.6 216 chr3R 23564423 intron beat-IV + chr3R 23564531 intron beat-IV + chr3R 23564639 intron beat-IV + chr3R_21_23560001 chr3R_23560001 RAL-892 2185 chr3R 23606021 23606066 chr3R 23607209 23607254 21 1186 31.0 21.0 26.0 0.8 1233 chr3R 23606021 3` UTR CG31145 - chr3R 23606638 3` UTR CG31145 - chr3R 23607254 intron CG31145 - chr3R_21_23605001 chr3R_23605001 RAL-892 2186 chr3R 23605288 23605337 chr3R 23607276 23607325 15 1992 9.0 34.0 21.5 0.7 2037 chr3R 23605288 intron CG10184 - chr3R 23606306 3` UTR CG31145 - chr3R 23607325 intron CG31145 - chr3R_15_23605001 chr3R_23605001 RAL-892 2187 chr3R 23627734 23627771 chr3R 23627836 23627867 6 99 1.5 0.0 0.8 3.3 133 chr3R 23627734 intron CG31145 - chr3R 23627800 intron CG31145 - chr3R 23627867 intron CG31145 - chr3R_6_23625001 chr3R_23625001 RAL-892 2188 chr3R 23684680 23684729 chr3R 23685185 23685214 roo 7 496 2.0 3.5 2.8 1.8 534 chr3R 23684680 exon CG18754 + chr3R 23684947 intron CG18754 + chr3R 23685214 exon CG18754 + chr3R_7_23680001 chr3R_23680001 RAL-892 2189 chr3R 23714061 23714070 chr3R 23714168 23714177 6 107 10.0 0.0 5.0 1.0 116 chr3R 23714061 intron nau - chr3R 23714119 intron nau - chr3R 23714177 intron nau - chr3R_6_23710001 chr3R_23710001 RAL-892 2190 chr3R 23787499 23787528 chr3R 23787598 23787627 9 99 5.0 2.5 3.8 1.9 128 chr3R 23787499 intron mbc + chr3R 23787563 intron mbc + chr3R 23787627 intron mbc + chr3R_9_23785001 chr3R_23785001 RAL-892 2191 chr3R 23835386 23835405 chr3R 23844556 23844575 roo 8 9170 8.0 0.0 4.0 1.6 9189 chr3R 23835386 intron CG34355 + chr3R 23839980 intron CG34355 + chr3R 23844575 intron CG34355 + chr3R_8_23835001 chr3R_23835001 RAL-892 2192 chr3R 23851068 23851089 chr3R 23858755 23858776 opus 13 7686 4.5 10.0 7.2 1.6 7708 chr3R 23851068 3` UTR CG34355 + chr3R 23854922 intergenic not near genes chr3R 23858776 intergenic not near genes chr3R_13_23850001 chr3R_23850001 RAL-892 2193 chr3R 23884283 23884325 chr3R 23884377 23884429 13 102 6.0 2.5 4.2 2.5 146 chr3R 23884283 intron Pli - chr3R 23884356 intron Pli - chr3R 23884429 intron Pli - chr3R_13_23880001 chr3R_23880001 RAL-892 2194 chr3R 23888067 23888112 chr3R 23888173 23888218 17 106 5.5 5.0 5.2 2.7 151 chr3R 23888067 intron Pli - chr3R 23888142 intron Pli - chr3R 23888218 intron Pli - chr3R_17_23885001 chr3R_23885001 RAL-892 2195 chr3R 23944891 23944935 chr3R 23944996 23945037 9 101 5.0 3.5 4.2 1.7 146 chr3R 23944891 intron CG12268 - chr3R 23944964 intron CG12268 - chr3R 23945037 exon CG12268 - chr3R_9_23940001 chr3R_23940001 RAL-892 2196 chr3R 23949020 23949069 chr3R 23949117 23949165 23 96 2.5 3.0 2.8 6.1 145 chr3R 23949020 intergenic not near genes chr3R 23949092 intergenic not near genes chr3R 23949165 intergenic not near genes chr3R_23_23945001 chr3R_23945001 RAL-892 2197 chr3R 24011648 24011659 chr3R 24011751 24011761 6 103 2.0 8.0 5.0 1.0 113 chr3R 24011648 intron KrT95D - chr3R 24011704 intron KrT95D - chr3R 24011761 intron KrT95D - chr3R_6_24010001 chr3R_24010001 RAL-892 2198 chr3R 24021606 24021658 chr3R 24021715 24021768 19 110 3.5 5.0 4.2 3.7 162 chr3R 24021606 intron KrT95D - chr3R 24021687 intron KrT95D - chr3R 24021768 intron KrT95D - chr3R_19_24020001 chr3R_24020001 RAL-892 2199 chr3R 24072094 24072108 chr3R 24072521 24072566 jockey 4 439 7.0 7.0 7.0 0.5 472 chr3R 24072094 intron 4EHP - chr3R 24072330 intron 4EHP - chr3R 24072566 intron 4EHP - chr3R_4_24070001 chr3R_24070001 RAL-892 2200 chr3R 24076899 24076944 chr3R 24078386 24078421 hobo 10 1486 2.0 3.5 2.8 2.6 1522 chr3R 24076899 intron 4EHP - chr3R 24077660 intron 4EHP - chr3R 24078421 intron 4EHP - chr3R_10_24075001 chr3R_24075001 RAL-892 2201 chr3R 24144555 24144598 chr3R 24144718 24144733 15 160 5.0 7.0 6.0 2.1 178 chr3R 24144555 intron Kal1 + chr3R 24144644 intron Kal1 + chr3R 24144733 intron Kal1 + chr3R_15_24140001 chr3R_24140001 RAL-892 2202 chr3R 24199717 24199770 chr3R 24199817 24199870 16 99 3.5 3.0 3.2 3.8 153 chr3R 24199717 intron twin - chr3R 24199794 intron twin - chr3R 24199870 intron twin - chr3R_16_24195001 chr3R_24195001 RAL-892 2203 chr3R 24207195 24207244 chr3R 24212290 24212340 flea 16 5094 3.5 7.0 5.2 2.6 5145 chr3R 24207195 intron twin - chr3R 24209768 intron twin - chr3R 24212340 intron twin - chr3R_16_24205001 chr3R_24205001 RAL-892 2204 chr3R 24431580 24431626 chr3R 24431679 24431725 14 99 7.0 0.0 3.5 3.1 145 chr3R 24431580 intron nAChRalpha1 - chr3R 24431652 intron nAChRalpha1 - chr3R 24431725 intron nAChRalpha1 - chr3R_14_24430001 chr3R_24430001 RAL-892 2205 chr3R 24434220 24434273 chr3R 24434318 24434369 16 95 3.5 1.5 2.5 4.6 149 chr3R 24434220 intron nAChRalpha1 - chr3R 24434294 intron nAChRalpha1 - chr3R 24434369 intron nAChRalpha1 - chr3R_16_24430001 chr3R_24430001 RAL-892 2206 chr3R 24466445 24466463 chr3R 24466543 24466561 7 97 6.5 3.0 4.8 1.2 116 chr3R 24466445 intergenic not near genes chr3R 24466503 intergenic not near genes chr3R 24466561 intergenic not near genes chr3R_7_24465001 chr3R_24465001 RAL-892 2207 chr3R 24466468 24466486 chr3R 24466542 24466583 5 93 3.5 3.0 3.2 1.2 115 chr3R 24466468 intergenic not near genes chr3R 24466526 intergenic not near genes chr3R 24466583 intergenic not near genes chr3R_5_24465001 chr3R_24465001 RAL-892 2208 chr3R 24576462 24576500 chr3R 24576618 24576656 14 156 2.0 3.5 2.8 3.7 194 chr3R 24576462 intron CG13624 - chr3R 24576559 intron CG13624 - chr3R 24576656 intron CG13624 - chr3R_14_24575001 chr3R_24575001 RAL-892 2209 chr3R 24624371 24624382 chr3R 24624471 24624491 4 107 0.5 8.0 4.2 0.8 120 chr3R 24624371 intron Syx18 - chr3R 24624431 intron Syx18 - chr3R 24624491 exon Syx18 - chr3R_4_24620001 chr3R_24620001 RAL-892 2210 chr3R 24634584 24634632 chr3R 24634689 24634737 16 105 4.5 4.5 4.5 2.9 153 chr3R 24634584 3` UTR atl + chr3R 24634660 3` UTR,3` UTR atl +,CG43222 - chr3R 24634737 3` UTR CG43222 - chr3R_16_24630001 chr3R_24630001 RAL-892 2211 chr3R 24667589 24667631 chr3R 24667686 24667722 12 96 2.5 0.0 1.2 5.5 133 chr3R 24667589 intron slo + chr3R 24667656 intron slo + chr3R 24667722 intron slo + chr3R_12_24665001 chr3R_24665001 RAL-892 2212 chr3R 24670162 24670199 chr3R 24670267 24670269 11 102 2.0 1.5 1.8 3.9 107 chr3R 24670162 intron slo + chr3R 24670216 intron slo + chr3R 24670269 intron slo + chr3R_11_24670001 chr3R_24670001 RAL-892 2213 chr3R 24671206 24671240 chr3R 24671295 24671311 5 79 7.0 1.0 4.0 1.0 105 chr3R 24671206 intron slo + chr3R 24671258 intron slo + chr3R 24671311 intron slo + chr3R_5_24670001 chr3R_24670001 RAL-892 2214 chr3R 24724649 24724677 chr3R 24725568 24725596 10 922 29.0 29.0 29.0 0.3 947 chr3R 24724649 intron tok + chr3R 24725122 intron tok + chr3R 24725596 intron tok + chr3R_10_24725001 chr3R_24725001 RAL-892 2215 chr3R 24724648 24724700 chr3R 24725598 24725619 9 935 31.5 25.0 28.2 0.3 971 chr3R 24724648 intron tok + chr3R 24725134 intron tok + chr3R 24725619 intron tok + chr3R_9_24725001 chr3R_24725001 RAL-892 2216 chr3R 24730076 24730107 chr3R 24732474 24732489 Doc 4 2394 5.5 0.0 2.8 1.1 2413 chr3R 24730076 intron tok + chr3R 24731282 intron tok + chr3R 24732489 intron tok + chr3R_4_24730001 chr3R_24730001 RAL-892 2217 chr3R 24743009 24743061 chr3R 24743114 24743166 15 105 2.0 0.0 1.0 7.5 157 chr3R 24743009 intron tok + chr3R 24743088 intron tok + chr3R 24743166 exon tok + chr3R_15_24740001 chr3R_24740001 RAL-892 2218 chr3R 24787531 24787544 chr3R 24787627 24787640 6 95 8.0 1.0 4.5 1.1 109 chr3R 24787531 intergenic CG5805 - chr3R 24787586 intergenic CG5805 -,Ets96B + chr3R 24787640 intergenic CG5805 -,Ets96B + chr3R_6_24785001 chr3R_24785001 RAL-892 2219 chr3R 24927114 24927149 chr3R 24931925 24931960 Doc 10 4811 5.5 5.0 5.2 1.6 4846 chr3R 24927114 intergenic Trf4-2 + chr3R 24929537 intergenic not near genes chr3R 24931960 intergenic CG11771 + chr3R_10_24925001 chr3R_24925001 RAL-892 2220 chr3R 24974892 24974934 chr3R 24974991 24975028 16 98 4.0 5.5 4.8 2.8 136 chr3R 24974892 intergenic not near genes chr3R 24974960 intergenic not near genes chr3R 24975028 intergenic not near genes chr3R_16_24970001 chr3R_24970001 RAL-892 2221 chr3R 25004894 25004920 chr3R 25004997 25005023 5 103 1.0 6.0 3.5 1.1 129 chr3R 25004894 intron tnc + chr3R 25004958 intron tnc + chr3R 25005023 intron tnc + chr3R_5_25000001 chr3R_25000001 RAL-892 2222 chr3R 25018252 25018275 chr3R 25018337 25018348 11 84 5.5 2.0 3.8 2.3 96 chr3R 25018252 exon tnc + chr3R 25018300 exon tnc + chr3R 25018348 exon tnc + chr3R_11_25015001 chr3R_25015001 RAL-892 2223 chr3R 25027517 25027563 chr3R 25027750 25027796 15 232 3.5 3.0 3.2 3.6 279 chr3R 25027517 intron Hr96 + chr3R 25027656 intron Hr96 + chr3R 25027796 intron Hr96 + chr3R_15_25025001 chr3R_25025001 RAL-892 2224 chr3R 25052199 25052247 chr3R 25052312 25052363 19 114 5.0 6.5 5.8 2.8 164 chr3R 25052199 intron CG11791 + chr3R 25052281 intron CG11791 + chr3R 25052363 intron CG11791 + chr3R_19_25050001 chr3R_25050001 RAL-892 2225 chr3R 25368455 25368489 chr3R 25368593 25368624 15 137 8.5 0.0 4.2 2.9 169 chr3R 25368455 intron Fur1 - chr3R 25368540 intron Fur1 - chr3R 25368624 intron Fur1 - chr3R_15_25365001 chr3R_25365001 RAL-892 2226 chr3R 25411760 25411806 chr3R 25411875 25411929 9 120 1.5 5.0 3.2 2.1 169 chr3R 25411760 intron Fur1 - chr3R 25411844 intron Fur1 - chr3R 25411929 intron Fur1 - chr3R_9_25410001 chr3R_25410001 RAL-892 2227 chr3R 25520973 25520986 chr3R 25521092 25521105 4 119 5.5 6.5 6.0 0.6 132 chr3R 25520973 intron msi + chr3R 25521039 intron msi + chr3R 25521105 intron msi + chr3R_4_25520001 chr3R_25520001 RAL-892 2228 chr3R 7773344 7773344 chr3R 25538123 25538124 6 17764780 21.5 12.5 17.0 0.3 17764780 chr3R 7773344 intergenic not near genes chr3R 16655734 intergenic modSP - chr3R 25538124 intron msi + chr3R_6_16655001 chr3R_16655001 RAL-892 2229 chr3R 25551783 25551832 chr3R 25551880 25551928 14 97 1.5 7.0 4.2 2.7 145 chr3R 25551783 intron msi + chr3R 25551856 intron msi + chr3R 25551928 intron msi + chr3R_14_25550001 chr3R_25550001 RAL-892 2230 chr3R 25574892 25574939 chr3R 25574987 25575037 16 91 4.5 5.0 4.8 2.8 145 chr3R 25574892 exon msi + chr3R 25574964 intron msi + chr3R 25575037 intron msi + chr3R_16_25570001 chr3R_25570001 RAL-892 2231 chr3R 25661259 25661301 chr3R 25661358 25661400 12 96 3.5 5.0 4.2 2.3 141 chr3R 25661259 5` UTR Tnks - chr3R 25661330 intergenic Tnks -,CR45208 -,RASSF8 + chr3R 25661400 intergenic Tnks -,CR45208 -,RASSF8 + chr3R_12_25660001 chr3R_25660001 RAL-892 2232 chr3R 25671219 25671231 chr3R 25671337 25671346 4 117 12.0 0.0 6.0 0.6 127 chr3R 25671219 intron Lgr3 + chr3R 25671282 intron Lgr3 + chr3R 25671346 intron Lgr3 + chr3R_4_25670001 chr3R_25670001 RAL-892 2233 chr3R 25697934 25697972 chr3R 25698058 25698106 8 131 2.5 4.0 3.2 1.9 172 chr3R 25697934 intergenic not near genes chr3R 25698020 intergenic not near genes chr3R 25698106 intergenic not near genes chr3R_8_25695001 chr3R_25695001 RAL-892 2234 chr3R 25725812 25725857 chr3R 25734992 25735037 roo 12 9180 3.5 9.0 6.2 1.7 9225 chr3R 25725812 intron LpR2 - chr3R 25730424 intron LpR2 - chr3R 25735037 intron LpR2 - chr3R_12_25730001 chr3R_25730001 RAL-892 2235 chr3R 25738722 25738767 chr3R 25738824 25738869 20 101 5.5 6.0 5.8 2.9 147 chr3R 25738722 intron LpR2 - chr3R 25738796 intron LpR2 - chr3R 25738869 intron LpR2 - chr3R_20_25735001 chr3R_25735001 RAL-892 2236 chr3R 25796323 25796350 chr3R 25796411 25796458 11 100 2.5 6.5 4.5 2.0 135 chr3R 25796323 intergenic CR43847 - chr3R 25796390 intergenic CR43847 - chr3R 25796458 intergenic CR43847 - chr3R_11_25795001 chr3R_25795001 RAL-892 2237 chr3R 25832677 25832724 chr3R 25841878 25841926 roo 6 9201 3.0 4.5 3.8 1.2 9249 chr3R 25832677 exon alpha4GT2 + chr3R 25837302 intron alpha4GT2 + chr3R 25841926 exon alpha4GT2 + chr3R_6_25835001 chr3R_25835001 RAL-892 2238 chr3R 25927489 25927525 chr3R 25927586 25927627 5 101 10.5 0.0 5.2 0.8 138 chr3R 25927489 intron CCAP-R - chr3R 25927558 intron CCAP-R - chr3R 25927627 intron CCAP-R - chr3R_5_25925001 chr3R_25925001 RAL-892 2239 chr3R 25962040 25962082 chr3R 25962155 25962198 20 116 1.0 3.0 2.0 6.7 158 chr3R 25962040 5` UTR boss + chr3R 25962119 intron boss + chr3R 25962198 intron boss + chr3R_20_25960001 chr3R_25960001 RAL-892 2240 chr3R 26010152 26010209 chr3R 26010249 26010303 15 90 1.0 2.0 1.5 6.0 151 chr3R 26010152 intergenic not near genes chr3R 26010228 intergenic not near genes chr3R 26010303 intergenic not near genes chr3R_15_26010001 chr3R_26010001 RAL-892 2241 chr3R 26018667 26018688 chr3R 26018775 26018795 8 106 7.5 4.0 5.8 1.2 128 chr3R 26018667 3` UTR CR43643 - chr3R 26018731 3` UTR CR43643 - chr3R 26018795 3` UTR CR43643 - chr3R_8_26015001 chr3R_26015001 RAL-892 2242 chr3R 26038345 26038396 chr3R 26038451 26038501 8 106 5.0 4.0 4.5 1.5 156 chr3R 26038345 intergenic E(spl)m7-HLH + chr3R 26038423 intergenic E(spl)m7-HLH + chr3R 26038501 intergenic E(spl)m7-HLH + chr3R_8_26035001 chr3R_26035001 RAL-892 2243 chr3R 26038949 26038999 chr3R 26039106 26039156 11 157 4.0 3.5 3.8 2.3 207 chr3R 26038949 intergenic not near genes chr3R 26039052 intergenic not near genes chr3R 26039156 intergenic not near genes chr3R_11_26035001 chr3R_26035001 RAL-892 2244 chr3R 26061716 26061762 chr3R 26061833 26061877 13 117 1.5 6.5 4.0 2.6 161 chr3R 26061716 intron CG14551 - chr3R 26061796 intron CG14551 - chr3R 26061877 intron CG14551 - chr3R_13_26060001 chr3R_26060001 RAL-892 2245 chr3R 26122443 26122480 chr3R 26122539 26122576 8 95 7.0 7.5 7.2 1.0 133 chr3R 26122443 intron CG31324 + chr3R 26122510 intron CG31324 + chr3R 26122576 intron CG31324 + chr3R_8_26120001 chr3R_26120001 RAL-892 2246 chr3R 26126531 26126566 chr3R 26126637 26126672 14 104 4.5 6.0 5.2 2.3 141 chr3R 26126531 intron CG31324 + chr3R 26126602 intron CG31324 + chr3R 26126672 intron,5` UTR CG31324 +,CG14556 + chr3R_14_26125001 chr3R_26125001 RAL-892 2247 chr3R 26166618 26166670 chr3R 26166731 26166759 19 111 7.0 2.0 4.5 3.5 141 chr3R 26166618 intergenic not near genes chr3R 26166688 intergenic not near genes chr3R 26166759 intergenic not near genes chr3R_19_26165001 chr3R_26165001 RAL-892 2248 chr3R 26214274 26214314 chr3R 26214450 26214490 6 176 0.0 5.0 2.5 1.7 216 chr3R 26214274 intergenic not near genes chr3R 26214382 intergenic not near genes chr3R 26214490 intergenic not near genes chr3R_6_26210001 chr3R_26210001 RAL-892 2249 chr3R 26235490 26235504 chr3R 26235575 26235588 5 87 1.0 1.5 1.2 2.3 98 chr3R 26235490 5` UTR CR42745 + chr3R 26235539 5` UTR CR42745 + chr3R 26235588 5` UTR CR42745 + chr3R_5_26235001 chr3R_26235001 RAL-892 2250 chr3R 26235512 26235521 chr3R 26235574 26235623 4 82 0.5 1.5 1.0 2.0 111 chr3R 26235512 5` UTR CR42745 + chr3R 26235568 5` UTR CR42745 + chr3R 26235623 intron CR42745 + chr3R_4_26235001 chr3R_26235001 RAL-892 2251 chr3R 26239811 26239851 chr3R 26240142 26240182 12 330 4.5 3.5 4.0 2.4 371 chr3R 26239811 intron CR42745 + chr3R 26239996 intron CR42745 + chr3R 26240182 intron CR42745 + chr3R_12_26235001 chr3R_26235001 RAL-892 2252 chr3R 26288740 26288779 chr3R 26290045 26290084 10 1304 5.5 3.0 4.2 1.9 1344 chr3R 26288740 intergenic not near genes chr3R 26289412 intergenic not near genes chr3R 26290084 intergenic not near genes chr3R_10_26285001 chr3R_26285001 RAL-892 2253 chr3R 26294698 26294714 chr3R 26294796 26294812 8 98 9.0 4.5 6.8 1.0 114 chr3R 26294698 intergenic not near genes chr3R 26294755 intergenic not near genes chr3R 26294812 intergenic not near genes chr3R_8_26290001 chr3R_26290001 RAL-892 2254 chr3R 26294720 26294750 chr3R 26294794 26294848 22 95 5.0 4.5 4.8 3.8 128 chr3R 26294720 intergenic not near genes chr3R 26294784 intergenic not near genes chr3R 26294848 intergenic not near genes chr3R_22_26290001 chr3R_26290001 RAL-892 2255 chr3R 26350293 26350302 chr3R 26350447 26350463 4 159 4.0 2.0 3.0 1.0 170 chr3R 26350293 intron CG33970 + chr3R 26350378 intron CG33970 + chr3R 26350463 intron CG33970 + chr3R_4_26350001 chr3R_26350001 RAL-892 2256 chr3R 26373244 26373298 chr3R 26373347 26373401 19 103 5.0 5.5 5.2 3.1 157 chr3R 26373244 intergenic not near genes chr3R 26373322 intergenic not near genes chr3R 26373401 intergenic not near genes chr3R_19_26370001 chr3R_26370001 RAL-892 2257 chr3R 26376306 26376347 chr3R 26385486 26385527 roo 11 9177 3.0 1.0 2.0 3.7 9221 chr3R 26376306 intergenic not near genes chr3R 26380916 intergenic not near genes chr3R 26385527 intergenic not near genes chr3R_11_26380001 chr3R_26380001 RAL-892 2258 chr3R 26413262 26413299 chr3R 26413369 26413412 8 110 1.0 3.0 2.0 2.7 150 chr3R 26413262 intergenic not near genes chr3R 26413337 intergenic not near genes chr3R 26413412 intergenic not near genes chr3R_8_26410001 chr3R_26410001 RAL-892 2259 chr3R 26444336 26444379 chr3R 26444434 26444469 8 97 0.0 4.5 2.2 2.5 133 chr3R 26444336 intron tx + chr3R 26444402 intron tx + chr3R 26444469 intron tx + chr3R_8_26440001 chr3R_26440001 RAL-892 2260 chr3R 26510482 26510535 chr3R 26519563 26519597 roo 16 9080 3.5 2.5 3.0 4.0 9115 chr3R 26510482 intron plum - chr3R 26515040 intron plum - chr3R 26519597 intron,5` UTR plum -,CR45226 + chr3R_16_26515001 chr3R_26515001 RAL-892 2261 chr3R 26542025 26542079 chr3R 26542136 26542165 13 96 3.0 2.0 2.5 3.7 140 chr3R 26542025 intron scrib + chr3R 26542095 intron scrib + chr3R 26542165 intron scrib + chr3R_13_26540001 chr3R_26540001 RAL-892 2262 chr3R 26558304 26558355 chr3R 26565637 26565687 Stalker4 6 7327 3.0 3.5 3.2 1.4 7383 chr3R 26558304 intron scrib + chr3R 26561996 intron scrib + chr3R 26565687 intron scrib + chr3R_6_26560001 chr3R_26560001 RAL-892 2263 chr3R 26641619 26641662 chr3R 26641726 26641766 11 102 5.0 4.0 4.5 2.0 147 chr3R 26641619 intergenic not near genes chr3R 26641692 intergenic not near genes chr3R 26641766 intergenic not near genes chr3R_11_26640001 chr3R_26640001 RAL-892 2264 chr3R 26642731 26642757 chr3R 26643143 26643171 jockey 11 413 5.5 5.5 5.5 1.7 440 chr3R 26642731 intergenic not near genes chr3R 26642951 intergenic not near genes chr3R 26643171 intergenic not near genes chr3R_11_26640001 chr3R_26640001 RAL-892 2265 chr3R 26660625 26660671 chr3R 26660729 26660759 9 100 1.0 1.5 1.2 4.1 134 chr3R 26660625 intron beat-VII - chr3R 26660692 intron beat-VII - chr3R 26660759 intron beat-VII - chr3R_9_26660001 chr3R_26660001 RAL-892 2266 chr3R 26770223 26770271 chr3R 26770317 26770368 15 97 3.5 4.0 3.8 3.1 145 chr3R 26770223 intergenic CR45563 + chr3R 26770296 intergenic CR45563 + chr3R 26770368 intergenic not near genes chr3R_15_26770001 chr3R_26770001 RAL-892 2267 chr3R 26810532 26810581 chr3R 26811037 26811086 roo 17 505 4.0 4.5 4.2 3.3 554 chr3R 26810532 intron Tl + chr3R 26810809 intron Tl + chr3R 26811086 intron Tl + chr3R_17_26810001 chr3R_26810001 RAL-892 2268 chr3R 26845552 26845599 chr3R 26845652 26845694 9 99 3.0 6.5 4.8 1.6 142 chr3R 26845552 intron Lerp - chr3R 26845623 intron Lerp - chr3R 26845694 intron Lerp - chr3R_9_26845001 chr3R_26845001 RAL-892 2269 chr3R 27007386 27007431 chr3R 27016541 27016586 roo 12 9154 7.0 5.5 6.2 1.7 9200 chr3R 27007386 intron RYa-R + chr3R 27011986 intron RYa-R + chr3R 27016586 intron RYa-R + chr3R_12_27010001 chr3R_27010001 RAL-892 2270 chr3R 27028706 27028753 chr3R 27028805 27028852 20 98 2.0 1.5 1.8 7.1 146 chr3R 27028706 intron RYa-R + chr3R 27028779 intron RYa-R + chr3R 27028852 intron RYa-R + chr3R_20_27025001 chr3R_27025001 RAL-892 2271 chr3R 27030201 27030239 chr3R 27030350 27030379 11 147 5.0 0.0 2.5 3.1 178 chr3R 27030201 intron RYa-R + chr3R 27030290 intron RYa-R + chr3R 27030379 intron RYa-R + chr3R_11_27030001 chr3R_27030001 RAL-892 2272 chr3R 27101532 27101563 chr3R 27101657 27101689 12 126 4.0 5.0 4.5 2.2 157 chr3R 27101532 exon CG17189 + chr3R 27101610 intron CG17189 + chr3R 27101689 exon CG17189 + chr3R_12_27100001 chr3R_27100001 RAL-892 2273 chr3R 27140497 27140544 chr3R 27148127 27148174 412 16 7627 3.0 6.0 4.5 2.9 7677 chr3R 27140497 intron CG6051 - chr3R 27144336 intron CG6051 - chr3R 27148174 intron CG6051 - chr3R_16_27140001 chr3R_27140001 RAL-892 2274 chr3R 27200146 27200153 chr3R 27200252 27200255 4 106 5.5 3.5 4.5 0.7 109 chr3R 27200146 intergenic not near genes chr3R 27200200 intergenic not near genes chr3R 27200255 intergenic not near genes chr3R_4_27200001 chr3R_27200001 RAL-892 2275 chr3R 27200154 27200186 chr3R 27200250 27200292 8 102 3.0 3.5 3.2 1.9 138 chr3R 27200154 intergenic not near genes chr3R 27200223 intergenic not near genes chr3R 27200292 intergenic not near genes chr3R_8_27200001 chr3R_27200001 RAL-892 2276 chr3R 27329455 27329501 chr3R 27329552 27329598 14 94 4.0 7.5 5.8 2.1 143 chr3R 27329455 intergenic CG3330 - chr3R 27329526 intergenic CG3330 - chr3R 27329598 intergenic CG3330 - chr3R_14_27325001 chr3R_27325001 RAL-892 2277 chr3R 27342783 27342825 chr3R 27351384 27351426 Tirant 16 8600 3.0 7.0 5.0 2.7 8643 chr3R 27342783 intron CG42534 + chr3R 27347104 intron CG42534 + chr3R 27351426 intron CG42534 + chr3R_16_27345001 chr3R_27345001 RAL-892 2278 chr3R 27445229 27445272 chr3R 27445325 27445369 4 94 1.0 1.0 1.0 2.0 140 chr3R 27445229 intergenic not near genes chr3R 27445299 intergenic not near genes chr3R 27445369 intergenic not near genes chr3R_4_27445001 chr3R_27445001 RAL-892 2279 chr3R 27452568 27452607 chr3R 27452768 27452807 13 200 3.5 6.0 4.8 2.2 239 chr3R 27452568 intergenic not near genes chr3R 27452688 intergenic not near genes chr3R 27452807 intergenic not near genes chr3R_13_27450001 chr3R_27450001 RAL-892 2280 chr3R 27470024 27470071 chr3R 27470706 27470722 10 669 3.0 1.5 2.2 3.1 698 chr3R 27470024 intergenic not near genes chr3R 27470373 intergenic not near genes chr3R 27470722 intergenic not near genes chr3R_10_27470001 chr3R_27470001 RAL-892 2281 chr3R 27492362 27492406 chr3R 27492469 27492513 10 106 2.5 3.0 2.8 2.6 151 chr3R 27492362 intergenic not near genes chr3R 27492438 intergenic not near genes chr3R 27492513 intergenic not near genes chr3R_10_27490001 chr3R_27490001 RAL-892 2282 chr3R 27619685 27619727 chr3R 27619817 27619842 9 123 0.0 0.5 0.2 7.5 157 chr3R 27619685 intron Tusp + chr3R 27619764 intron Tusp + chr3R 27619842 intron Tusp + chr3R_9_27615001 chr3R_27615001 RAL-892 2283 chr3R 27644231 27644283 chr3R 27644343 27644395 22 112 3.0 3.5 3.2 5.2 164 chr3R 27644231 intron tau - chr3R 27644313 intron tau - chr3R 27644395 intron tau - chr3R_22_27640001 chr3R_27640001 RAL-892 2284 chr3R 27679920 27679971 chr3R 27680063 27680114 7 130 3.5 4.5 4.0 1.4 194 chr3R 27679920 exon CG12883 + chr3R 27680017 3` UTR CG12883 + chr3R 27680114 3` UTR CG12883 + chr3R_7_27680001 chr3R_27680001 RAL-892 2285 chr3R 27705351 27705390 chr3R 27705441 27705490 9 90 4.0 4.0 4.0 1.8 139 chr3R 27705351 exon CG12428 - chr3R 27705420 intron CG12428 - chr3R 27705490 exon CG12428 - chr3R_9_27705001 chr3R_27705001 RAL-892 2286 chr3R 27725550 27725592 chr3R 27731012 27731054 I-element 15 5462 4.0 6.5 5.2 2.4 5504 chr3R 27725550 intergenic not near genes chr3R 27728302 intergenic not near genes chr3R 27731054 intergenic not near genes chr3R_15_27725001 chr3R_27725001 RAL-892 2287 chr3R 27747971 27748018 chr3R 27748069 27748116 13 97 5.5 3.5 4.5 2.4 145 chr3R 27747971 3` UTR Ets98B + chr3R 27748044 3` UTR Ets98B + chr3R 27748116 3` UTR Ets98B + chr3R_13_27745001 chr3R_27745001 RAL-892 2288 chr3R 27779259 27779276 chr3R 27779356 27779360 4 94 6.0 2.5 4.2 0.8 101 chr3R 27779259 exon CG34353 - chr3R 27779310 intron CG34353 - chr3R 27779360 intron CG34353 - chr3R_4_27775001 chr3R_27775001 RAL-892 2289 chr3R 27799918 27799960 chr3R 27800020 27800062 14 102 3.0 3.5 3.2 3.3 144 chr3R 27799918 intron CG34353 - chr3R 27799990 intron CG34353 - chr3R 27800062 intron CG34353 - chr3R_14_27795001 chr3R_27795001 RAL-892 2290 chr3R 27829894 27829928 chr3R 27829993 27830027 7 99 6.0 1.0 3.5 1.6 133 chr3R 27829894 intron CG34353 - chr3R 27829960 intron CG34353 - chr3R 27830027 intron CG34353 - chr3R_7_27825001 chr3R_27825001 RAL-892 2291 chr3R 27840260 27840269 chr3R 27840413 27840422 4 153 0.0 2.5 1.2 1.8 162 chr3R 27840260 intron CG34353 - chr3R 27840341 intron CG34353 - chr3R 27840422 intron CG34353 - chr3R_4_27840001 chr3R_27840001 RAL-892 2292 chr3R 27856761 27856786 chr3R 27858263 27858284 hopper2 7 1502 3.5 5.0 4.2 1.3 1523 chr3R 27856761 intron CG34353 - chr3R 27857522 intron CG34353 - chr3R 27858284 intron CG34353 - chr3R_7_27855001 chr3R_27855001 RAL-892 2293 chr3R 27862949 27862983 chr3R 27868262 27868308 Transpac 11 5324 1.5 1.5 1.5 4.4 5359 chr3R 27862949 intron CG34353 - chr3R 27865628 intron CG34353 - chr3R 27868308 intron CG34353 - chr3R_11_27865001 chr3R_27865001 RAL-892 2294 chr3R 27875682 27875723 chr3R 27882755 27882798 297 7 7075 7.5 5.5 6.5 0.9 7116 chr3R 27875682 intron CG34353 - chr3R 27879240 intron CG34353 - chr3R 27882798 intron CG34353 - chr3R_7_27875001 chr3R_27875001 RAL-892 2295 chr3R 27911228 27911259 chr3R 27911325 27911357 12 98 5.5 6.0 5.8 1.8 129 chr3R 27911228 intergenic not near genes chr3R 27911292 intergenic not near genes chr3R 27911357 intergenic not near genes chr3R_12_27910001 chr3R_27910001 RAL-892 2296 chr3R 28012949 28012978 chr3R 28013170 28013189 5 230 1.0 2.0 1.5 2.0 240 chr3R 28012949 intergenic not near genes chr3R 28013069 intergenic not near genes chr3R 28013189 intergenic not near genes chr3R_5_28010001 chr3R_28010001 RAL-892 2297 chr3R 28054422 28054473 chr3R 28054518 28054569 8 92 4.0 3.5 3.8 1.7 147 chr3R 28054422 intron CG34362 + chr3R 28054496 intron CG34362 + chr3R 28054569 intron CG34362 + chr3R_8_28050001 chr3R_28050001 RAL-892 2298 chr3R 28068475 28068507 chr3R 28073937 28073964 I-element 7 5458 0.5 0.5 0.5 4.7 5489 chr3R 28068475 intron CG34362 + chr3R 28071220 intron CG34362 + chr3R 28073964 intron CG34362 + chr3R_7_28070001 chr3R_28070001 RAL-892 2299 chr3R 28103310 28103342 chr3R 28103415 28103444 8 110 1.5 1.5 1.5 3.2 134 chr3R 28103310 intergenic not near genes chr3R 28103377 intergenic not near genes chr3R 28103444 intergenic not near genes chr3R_8_28100001 chr3R_28100001 RAL-892 2300 chr3R 28129914 28129930 chr3R 28130002 28130039 6 104 1.0 1.0 1.0 3.0 125 chr3R 28129914 intergenic not near genes chr3R 28129976 intergenic not near genes chr3R 28130039 intergenic not near genes chr3R_6_28125001 chr3R_28125001 RAL-892 2301 chr3R 28173344 28173383 chr3R 28173462 28173501 7 116 3.0 4.0 3.5 1.6 157 chr3R 28173344 intron CG34354 + chr3R 28173422 intron CG34354 + chr3R 28173501 intron CG34354 + chr3R_7_28170001 chr3R_28170001 RAL-892 2302 chr3R 28173657 28173701 chr3R 28181107 28181151 mdg1 13 7450 2.5 3.5 3.0 3.2 7494 chr3R 28173657 intron CG34354 + chr3R 28177404 intron CG34354 + chr3R 28181151 intron CG34354 + chr3R_13_28175001 chr3R_28175001 RAL-892 2303 chr3R 28253344 28253367 chr3R 28255854 28255897 jockey 9 2523 1.5 9.0 5.2 1.5 2553 chr3R 28253344 intergenic not near genes chr3R 28254620 intergenic not near genes chr3R 28255897 intergenic not near genes chr3R_9_28250001 chr3R_28250001 RAL-892 2304 chr3R 28282975 28283010 chr3R 28283624 28283659 12 649 3.5 4.5 4.0 2.4 684 chr3R 28282975 exon CG34436 + chr3R 28283317 exon CG34436 + chr3R 28283659 intergenic CG34437 +,CG34436 + chr3R_12_28280001 chr3R_28280001 RAL-892 2305 chr3R 28302088 28302130 chr3R 28302547 28302583 jockey 12 458 8.0 10.0 9.0 1.2 495 chr3R 28302088 intergenic not near genes chr3R 28302336 intergenic not near genes chr3R 28302583 intergenic not near genes chr3R_12_28300001 chr3R_28300001 RAL-892 2306 chr3R 28345627 28345729 chr3R 28345723 28345838 14 105 0.0 0.5 0.2 11.7 211 chr3R 28345627 intergenic Moca-cyp + chr3R 28345732 intergenic not near genes chr3R 28345838 intergenic not near genes chr3R_14_28345001 chr3R_28345001 RAL-892 2307 chr3R 28352494 28352542 chr3R 28352854 28352902 15 357 2.5 5.0 3.8 3.1 408 chr3R 28352494 exon Or98b + chr3R 28352698 exon Or98b + chr3R 28352902 exon Or98b + chr3R_15_28350001 chr3R_28350001 RAL-892 2308 chr3R 28371130 28371150 chr3R 28371202 28371231 4 85 4.0 4.5 4.2 0.8 101 chr3R 28371130 intergenic not near genes chr3R 28371180 intergenic not near genes chr3R 28371231 intergenic not near genes chr3R_4_28370001 chr3R_28370001 RAL-892 2309 chr3R 28382144 28382170 chr3R 28382247 28382273 8 102 6.0 1.5 3.8 1.7 129 chr3R 28382144 intergenic not near genes chr3R 28382208 intergenic not near genes chr3R 28382273 intergenic not near genes chr3R_8_28380001 chr3R_28380001 RAL-892 2310 chr3R 28393686 28393731 chr3R 28393801 28393851 15 119 2.0 6.0 4.0 3.0 165 chr3R 28393686 intergenic not near genes chr3R 28393768 intergenic not near genes chr3R 28393851 intergenic not near genes chr3R_15_28390001 chr3R_28390001 RAL-892 2311 chr3R 28454197 28454238 chr3R 28454399 28454425 10 200 2.0 4.0 3.0 2.5 228 chr3R 28454197 intron beat-VI + chr3R 28454311 intron beat-VI + chr3R 28454425 intron beat-VI + chr3R_10_28450001 chr3R_28450001 RAL-892 2312 chr3R 28460766 28460813 chr3R 28460864 28460921 9 105 2.5 2.5 2.5 2.6 155 chr3R 28460766 intron beat-VI + chr3R 28460844 intron beat-VI + chr3R 28460921 intron beat-VI + chr3R_9_28460001 chr3R_28460001 RAL-892 2313 chr3R 28478188 28478233 chr3R 28478313 28478359 13 123 1.5 2.0 1.8 4.6 171 chr3R 28478188 intergenic not near genes chr3R 28478274 intergenic not near genes chr3R 28478359 intergenic not near genes chr3R_13_28475001 chr3R_28475001 RAL-892 2314 chr3R 28595657 28595694 chr3R 28595848 28595885 6 183 1.5 4.5 3.0 1.5 228 chr3R 28595657 intergenic not near genes chr3R 28595771 intergenic not near genes chr3R 28595885 intergenic not near genes chr3R_6_28595001 chr3R_28595001 RAL-892 2315 chr3R 28626177 28626218 chr3R 28626292 28626338 9 113 2.0 5.0 3.5 2.0 161 chr3R 28626177 intron CG10011 - chr3R 28626258 intron CG10011 - chr3R 28626338 intron CG10011 - chr3R_9_28625001 chr3R_28625001 RAL-892 2316 chr3R 28664032 28664079 chr3R 28666762 28666810 14 2727 13.5 17.5 15.5 0.8 2778 chr3R 28664032 intergenic not near genes chr3R 28665421 intergenic not near genes chr3R 28666810 intergenic not near genes chr3R_14_28665001 chr3R_28665001 RAL-892 2317 chr3R 28663726 28663734 chr3R 28666889 28666897 4 3163 35.0 22.5 28.8 0.1 3171 chr3R 28663726 intergenic not near genes chr3R 28665312 intergenic not near genes chr3R 28666897 intergenic not near genes chr3R_4_28665001 chr3R_28665001 RAL-892 2318 chr3R 28663717 28663768 chr3R 28666901 28666931 10 3166 42.0 23.0 32.5 0.3 3214 chr3R 28663717 intergenic not near genes chr3R 28665324 intergenic not near genes chr3R 28666931 intergenic not near genes chr3R_10_28665001 chr3R_28665001 RAL-892 2319 chr3R 28702912 28702959 chr3R 28703016 28703063 12 103 5.0 5.5 5.2 1.9 151 chr3R 28702912 intron htt + chr3R 28702988 intron htt + chr3R 28703063 intron htt + chr3R_12_28700001 chr3R_28700001 RAL-892 2320 chr3R 28758266 28758281 chr3R 28763903 28763918 roo 7 5637 8.5 1.0 4.8 1.2 5652 chr3R 28758266 intergenic aqrs - chr3R 28761092 intergenic not near genes chr3R 28763918 intergenic not near genes chr3R_7_28760001 chr3R_28760001 RAL-892 2321 chr3R 28763902 28763914 chr3R 28771365 28771377 Stalker4 6 7463 0.0 12.5 6.2 0.8 7475 chr3R 28763902 intergenic not near genes chr3R 28767640 intergenic not near genes chr3R 28771377 intergenic not near genes chr3R_6_28765001 chr3R_28765001 RAL-892 2322 chr3R 28792865 28792901 chr3R 28797975 28798016 jockey 11 5113 0.0 3.0 1.5 4.4 5151 chr3R 28792865 intergenic not near genes chr3R 28795440 intergenic not near genes chr3R 28798016 intergenic not near genes chr3R_11_28795001 chr3R_28795001 RAL-892 2323 chr3R 28811548 28811604 chr3R 28811714 28811770 12 166 5.5 0.5 3.0 3.0 222 chr3R 28811548 intergenic wdn - chr3R 28811659 intergenic wdn -,CG1646 + chr3R 28811770 intergenic CG1646 +,wdn - chr3R_12_28810001 chr3R_28810001 RAL-892 2324 chr3R 21907534 21907536 chr3R 28831801 28831802 56 6924266 18.0 10.0 14.0 3.7 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_56_25365001 chr3R_25365001 RAL-892 2325 chr3R 28870601 28870652 chr3R 28870703 28870755 12 102 3.5 1.5 2.5 3.4 154 chr3R 28870601 intergenic CG33203 -,spg + chr3R 28870678 3` UTR CG33203 - chr3R 28870755 3` UTR CG33203 - chr3R_12_28870001 chr3R_28870001 RAL-892 2326 chr3R 28930817 28930854 chr3R 28931094 28931131 6 277 19.0 32.5 25.8 0.2 314 chr3R 28930817 intron CG14521 - chr3R 28930974 intron CG14521 - chr3R 28931131 intron CG14521 - chr3R_6_28930001 chr3R_28930001 RAL-892 2327 chr3R 28971147 28971187 chr3R 28971248 28971288 15 101 3.0 5.0 4.0 3.0 141 chr3R 28971147 5` UTR CR45669 + chr3R 28971218 5` UTR CR45669 + chr3R 28971288 5` UTR CR45669 + chr3R_15_28970001 chr3R_28970001 RAL-892 2328 chr3R 29032724 29032774 chr3R 29032821 29032848 14 90 3.5 0.5 2.0 4.7 124 chr3R 29032724 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032786 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032848 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_14_29030001 chr3R_29030001 RAL-892 2329 chr3R 29034079 29034088 chr3R 29034494 29034503 4 415 0.0 7.5 3.8 0.8 424 chr3R 29034079 5` UTR CR45044 + chr3R 29034291 intergenic CR45044 +,Cpsf100 +,beta4GalNAcTB - chr3R 29034503 intergenic Cpsf100 +,CR45044 +,beta4GalNAcTB - chr3R_4_29030001 chr3R_29030001 RAL-892 2330 chr3R 29046464 29046498 chr3R 29046565 29046593 4 89 2.5 1.5 2.0 1.3 129 chr3R 29046464 3` UTR Pkc98E + chr3R 29046528 3` UTR Pkc98E + chr3R 29046593 3` UTR Pkc98E + chr3R_4_29045001 chr3R_29045001 RAL-892 2331 chr3R 29053715 29053766 chr3R 29054245 29054296 17 530 1.0 3.5 2.2 5.3 581 chr3R 29053715 exon CG11842 + chr3R 29054006 intergenic CG11842 +,CG11843 + chr3R 29054296 intergenic CG11843 +,CG11842 + chr3R_17_29050001 chr3R_29050001 RAL-892 2332 chr3R 29059355 29059368 chr3R 29059470 29059483 4 115 8.0 2.5 5.2 0.6 128 chr3R 29059355 3` UTR Cul5 - chr3R 29059419 3` UTR Cul5 - chr3R 29059483 3` UTR Cul5 - chr3R_4_29055001 chr3R_29055001 RAL-892 2333 chr3R 29059369 29059400 chr3R 29059469 29059515 12 109 2.5 2.5 2.5 3.4 146 chr3R 29059369 3` UTR Cul5 - chr3R 29059442 3` UTR Cul5 - chr3R 29059515 3` UTR Cul5 - chr3R_12_29055001 chr3R_29055001 RAL-892 2334 chr3R 29079374 29079412 chr3R 29080766 29080804 NOF 15 1389 0.5 1.5 1.0 7.5 1430 chr3R 29079374 intron CG11873 + chr3R 29080089 intron CG11873 + chr3R 29080804 intron CG11873 + chr3R_15_29080001 chr3R_29080001 RAL-892 2335 chr3R 29213042 29213092 chr3R 29213145 29213172 22 99 6.0 5.0 5.5 3.4 130 chr3R 29213042 intergenic not near genes chr3R 29213107 intergenic not near genes chr3R 29213172 intergenic not near genes chr3R_22_29210001 chr3R_29210001 RAL-892 2336 chr3R 29237229 29237279 chr3R 29239268 29239304 5 2032 18.5 2.5 10.5 0.4 2075 chr3R 29237229 exon CG11951 - chr3R 29238266 intron CG11951 - chr3R 29239304 exon CG31427 - chr3R_5_29235001 chr3R_29235001 RAL-892 2337 chr3R 29237522 29237530 chr3R 29239410 29239418 4 1888 18.5 12.5 15.5 0.2 1896 chr3R 29237522 exon CG11951 - chr3R 29238470 intron CG11951 - chr3R 29239418 exon CG31427 - chr3R_4_29235001 chr3R_29235001 RAL-892 2338 chr3R 29240292 29240321 chr3R 29240395 29240425 12 104 5.5 0.0 2.8 3.2 133 chr3R 29240292 intron CG31427 - chr3R 29240358 5` UTR CG31427 - chr3R 29240425 intergenic CG31427 -,CG31445 - chr3R_12_29240001 chr3R_29240001 RAL-892 2339 chr3R 29319809 29319853 chr3R 29320148 29320192 jockey 18 339 4.0 4.0 4.0 3.6 383 chr3R 29319809 intergenic Cnx99A - chr3R 29320000 intergenic Cnx99A - chr3R 29320192 intergenic not near genes chr3R_18_29320001 chr3R_29320001 RAL-892 2340 chr3R 29332265 29332308 chr3R 29332362 29332404 13 96 3.0 1.0 2.0 4.3 139 chr3R 29332265 intergenic not near genes chr3R 29332334 intergenic not near genes chr3R 29332404 intergenic not near genes chr3R_13_29330001 chr3R_29330001 RAL-892 2341 chr3R 29356027 29356077 chr3R 29356127 29356177 8 100 4.0 4.0 4.0 1.6 150 chr3R 29356027 intergenic CR45547 - chr3R 29356102 intergenic CR45547 - chr3R 29356177 3` UTR CR45547 - chr3R_8_29355001 chr3R_29355001 RAL-892 2342 chr3R 29365369 29365408 chr3R 29365471 29365509 11 100 3.5 3.0 3.2 2.6 140 chr3R 29365369 intergenic not near genes chr3R 29365439 intergenic not near genes chr3R 29365509 intergenic not near genes chr3R_11_29365001 chr3R_29365001 RAL-892 2343 chr3R 29376344 29376364 chr3R 29376452 29376472 4 108 5.0 0.0 2.5 1.1 128 chr3R 29376344 intergenic not near genes chr3R 29376408 intergenic not near genes chr3R 29376472 intergenic not near genes chr3R_4_29375001 chr3R_29375001 RAL-892 2344 chr3R 29389478 29389514 chr3R 29389565 29389606 10 84 2.0 3.0 2.5 2.9 128 chr3R 29389478 intron Ptp99A + chr3R 29389542 intron Ptp99A + chr3R 29389606 intron Ptp99A + chr3R_10_29385001 chr3R_29385001 RAL-892 2345 chr3R 29406605 29406622 chr3R 29407911 29407928 jockey 6 1305 8.0 8.0 8.0 0.7 1323 chr3R 29406605 intron Ptp99A + chr3R 29407266 intron Ptp99A + chr3R 29407928 intron Ptp99A + chr3R_6_29405001 chr3R_29405001 RAL-892 2346 chr3R 29429767 29429792 chr3R 29429865 29429883 5 94 3.5 3.0 3.2 1.2 116 chr3R 29429767 intron Ptp99A + chr3R 29429825 intron Ptp99A + chr3R 29429883 intron Ptp99A + chr3R_5_29425001 chr3R_29425001 RAL-892 2347 chr3R 29432766 29432807 chr3R 29432867 29432908 4 98 2.5 4.5 3.5 0.9 142 chr3R 29432766 intron Ptp99A + chr3R 29432837 intron Ptp99A + chr3R 29432908 intron Ptp99A + chr3R_4_29430001 chr3R_29430001 RAL-892 2348 chr3R 29472314 29472345 chr3R 29472405 29472451 5 98 2.0 2.0 2.0 1.7 137 chr3R 29472314 intron Ptp99A + chr3R 29472382 intron Ptp99A + chr3R 29472451 intron Ptp99A + chr3R_5_29470001 chr3R_29470001 RAL-892 2349 chr3R 29505873 29505921 chr3R 29505970 29506018 17 96 1.5 7.0 4.2 3.3 145 chr3R 29505873 intergenic not near genes chr3R 29505946 intergenic not near genes chr3R 29506018 intergenic not near genes chr3R_17_29505001 chr3R_29505001 RAL-892 2350 chr3R 29575815 29575838 chr3R 29575918 29575941 9 103 4.5 0.0 2.2 2.8 126 chr3R 29575815 intergenic not near genes chr3R 29575878 intergenic not near genes chr3R 29575941 intergenic not near genes chr3R_9_29575001 chr3R_29575001 RAL-892 2351 chr3R 29590358 29590370 chr3R 29590471 29590481 4 112 5.0 1.5 3.2 1.0 123 chr3R 29590358 exon CG31041 - chr3R 29590420 intron CG31041 - chr3R 29590481 intron CG31041 - chr3R_4_29590001 chr3R_29590001 RAL-892 2352 chr3R 29590374 29590399 chr3R 29590470 29590512 8 107 2.5 1.5 2.0 2.7 138 chr3R 29590374 intron CG31041 - chr3R 29590443 intron CG31041 - chr3R 29590512 exon CG31041 - chr3R_8_29590001 chr3R_29590001 RAL-892 2353 chr3R 29627549 29627591 chr3R 29627653 29627686 7 104 3.0 1.0 2.0 2.3 137 chr3R 29627549 intergenic not near genes chr3R 29627618 intergenic not near genes chr3R 29627686 intergenic not near genes chr3R_7_29625001 chr3R_29625001 RAL-892 2354 chr3R 29662256 29662278 chr3R 29662358 29662380 8 99 5.5 5.0 5.2 1.3 124 chr3R 29662256 intergenic not near genes chr3R 29662318 intergenic not near genes chr3R 29662380 intergenic not near genes chr3R_8_29660001 chr3R_29660001 RAL-892 2355 chr3R 29718129 29718177 chr3R 29718225 29718269 11 94 5.0 6.5 5.8 1.6 140 chr3R 29718129 intergenic not near genes chr3R 29718199 intergenic CG15506 + chr3R 29718269 intergenic CG15506 + chr3R_11_29715001 chr3R_29715001 RAL-892 2356 chr3R 29738246 29738295 chr3R 29739732 29739782 hobo 14 1485 1.5 3.5 2.5 4.0 1536 chr3R 29738246 intergenic CG1969 +,CG7598 + chr3R 29739014 intron CG1969 + chr3R 29739782 5` UTR CG1969 + chr3R_14_29735001 chr3R_29735001 RAL-892 2357 chr3R 29854813 29854860 chr3R 29854913 29854960 10 97 2.0 2.0 2.0 3.3 147 chr3R 29854813 3` UTR dgt1 - chr3R 29854886 exon dgt1 - chr3R 29854960 exon dgt1 - chr3R_10_29850001 chr3R_29850001 RAL-892 2358 chr3R 29882003 29882044 chr3R 29891179 29891221 roo 9 9176 4.5 0.5 2.5 2.6 9218 chr3R 29882003 intron CG31038 + chr3R 29886612 intron CG31038 + chr3R 29891221 intron CG31038 + chr3R_9_29885001 chr3R_29885001 RAL-892 2359 chr3R 29963490 29963509 chr3R 29963607 29963631 7 120 1.0 4.0 2.5 2.0 141 chr3R 29963490 intron TkR99D - chr3R 29963560 intron TkR99D - chr3R 29963631 intron TkR99D - chr3R_7_29960001 chr3R_29960001 RAL-892 2360 chr3R 30026943 30026986 chr3R 30027041 30027084 5 98 5.5 0.0 2.8 1.3 141 chr3R 30026943 intron Axn + chr3R 30027014 intron Axn + chr3R 30027084 intron Axn + chr3R_5_30025001 chr3R_30025001 RAL-892 2361 chr3R 30050282 30050316 chr3R 30050409 30050443 6 123 4.0 4.5 4.2 1.2 161 chr3R 30050282 intron,intron CG15528 -,CR44046 + chr3R 30050362 intron,intron CG15528 -,CR44046 + chr3R 30050443 intron,intron CG15528 -,CR44046 + chr3R_6_30050001 chr3R_30050001 RAL-892 2362 chr3R 30084837 30084881 chr3R 30086320 30086368 hobo 13 1485 4.0 5.0 4.5 2.4 1531 chr3R 30084837 intron sima + chr3R 30085602 intron sima + chr3R 30086368 intron sima + chr3R_13_30085001 chr3R_30085001 RAL-892 2363 chr3R 30175676 30175725 chr3R 30175782 30175831 13 106 4.0 2.5 3.2 3.1 155 chr3R 30175676 intergenic CG1983 - chr3R 30175754 intergenic CG1983 - chr3R 30175831 3` UTR CG1983 - chr3R_13_30175001 chr3R_30175001 RAL-892 2364 chr3R 30210598 30210674 chr3R 30210731 30210764 6 104 0.0 5.0 2.5 1.7 166 chr3R 30210598 intergenic Anp +,CecA1 + chr3R 30210681 intergenic CecA1 +,Anp + chr3R 30210764 intergenic CecA1 +,Anp + chr3R_6_30210001 chr3R_30210001 RAL-892 2365 chr3R 30238743 30238791 chr3R 30239927 30239975 1360 15 1183 4.0 5.5 4.8 2.6 1232 chr3R 30238743 intergenic not near genes chr3R 30239359 intergenic not near genes chr3R 30239975 intergenic not near genes chr3R_15_30235001 chr3R_30235001 RAL-892 2366 chr3R 30268224 30268424 chr3R 30268323 30268518 8 95 4.5 4.0 4.2 1.5 294 chr3R 30268224 intergenic not near genes chr3R 30268371 intergenic not near genes chr3R 30268518 intergenic not near genes chr3R_8_30265001 chr3R_30265001 RAL-892 2367 chr3R 30317326 30317351 chr3R 30324938 30324963 roo 5 7611 0.0 6.0 3.0 1.2 7637 chr3R 30317326 intron hdc + chr3R 30321144 intron hdc + chr3R 30324963 intron hdc + chr3R_5_30320001 chr3R_30320001 RAL-892 2368 chr3R 30375533 30375568 chr3R 30383178 30383213 412 12 7644 3.5 2.5 3.0 3.0 7680 chr3R 30375533 intergenic not near genes chr3R 30379373 intergenic not near genes chr3R 30383213 intergenic not near genes chr3R_12_30375001 chr3R_30375001 RAL-892 2369 chr3R 30396205 30396244 chr3R 30404483 30404530 roo 14 8285 7.0 5.5 6.2 1.9 8325 chr3R 30396205 intergenic not near genes chr3R 30400368 intergenic not near genes chr3R 30404530 5` UTR CR45570 + chr3R_14_30400001 chr3R_30400001 RAL-892 2370 chr3R 30461472 30461520 chr3R 30461608 30461656 23 136 3.5 4.5 4.0 4.6 184 chr3R 30461472 intron CDase + chr3R 30461564 intron CDase + chr3R 30461656 intron CDase + chr3R_23_30460001 chr3R_30460001 RAL-892 2371 chr3R 30480470 30480511 chr3R 30482955 30482998 jockey 15 2484 1.5 5.5 3.5 3.3 2528 chr3R 30480470 intron PH4alphaEFB + chr3R 30481734 intron PH4alphaEFB + chr3R 30482998 intron PH4alphaEFB + chr3R_15_30480001 chr3R_30480001 RAL-892 2372 chr3R 30483430 30483472 chr3R 30483526 30483560 9 88 4.0 3.5 3.8 1.9 130 chr3R 30483430 intron PH4alphaEFB + chr3R 30483495 intron PH4alphaEFB + chr3R 30483560 intron PH4alphaEFB + chr3R_9_30480001 chr3R_30480001 RAL-892 2373 chr3R 30488102 30488122 chr3R 30488201 30488221 8 99 3.0 0.0 1.5 3.2 119 chr3R 30488102 intergenic Jon99Fii - chr3R 30488162 intergenic Jon99Fii - chr3R 30488221 intergenic Jon99Fii - chr3R_8_30485001 chr3R_30485001 RAL-892 2374 chr3R 30498400 30498435 chr3R 30498619 30498654 10 219 0.0 8.0 4.0 2.0 254 chr3R 30498400 intron PH4alphaNE1 - chr3R 30498527 intron PH4alphaNE1 - chr3R 30498654 intron PH4alphaNE1 - chr3R_10_30495001 chr3R_30495001 RAL-892 2375 chr3R 30548997 30549039 chr3R 30549106 30549151 19 110 2.5 5.0 3.8 4.0 154 chr3R 30548997 intron tmod + chr3R 30549074 intron tmod + chr3R 30549151 intron tmod + chr3R_19_30545001 chr3R_30545001 RAL-892 2376 chr3R 30571681 30571709 chr3R 30571781 30571809 9 100 0.5 2.5 1.5 3.6 128 chr3R 30571681 intron tmod + chr3R 30571745 intron tmod + chr3R 30571809 exon tmod + chr3R_9_30570001 chr3R_30570001 RAL-892 2377 chr3R 30591316 30591340 chr3R 30591438 30591462 11 122 3.5 7.0 5.2 1.8 146 chr3R 30591316 intergenic not near genes chr3R 30591389 intergenic not near genes chr3R 30591462 intergenic not near genes chr3R_11_30590001 chr3R_30590001 RAL-892 2378 chr3R 30627609 30627635 chr3R 30627686 30627730 6 93 5.5 3.0 4.2 1.2 121 chr3R 30627609 exon CG2267 - chr3R 30627670 exon CG2267 - chr3R 30627730 exon CG2267 - chr3R_6_30625001 chr3R_30625001 RAL-892 2379 chr3R 30649862 30649871 chr3R 30649963 30649972 6 101 5.0 4.0 4.5 1.1 110 chr3R 30649862 3` UTR CG34432 + chr3R 30649917 intergenic CG34433 +,CG34432 + chr3R 30649972 exon CG34433 + chr3R_6_30645001 chr3R_30645001 RAL-892 2380 chr3R 30659754 30659779 chr3R 30659852 30659892 6 110 5.0 3.5 4.2 1.2 138 chr3R 30659754 intergenic not near genes chr3R 30659823 intergenic not near genes chr3R 30659892 intergenic not near genes chr3R_6_30655001 chr3R_30655001 RAL-892 2381 chr3R 30679525 30679551 chr3R 30687014 30687040 blood 4 7489 3.0 9.0 6.0 0.6 7515 chr3R 30679525 intergenic not near genes chr3R 30683282 intergenic not near genes chr3R 30687040 intergenic not near genes chr3R_4_30680001 chr3R_30680001 RAL-892 2382 chr3R 30690140 30690192 chr3R 30690244 30690290 10 101 1.5 5.0 3.2 2.4 150 chr3R 30690140 intergenic not near genes chr3R 30690215 intergenic Spn100A + chr3R 30690290 intergenic Spn100A + chr3R_10_30690001 chr3R_30690001 RAL-892 2383 chr3R 30700847 30700874 chr3R 30700990 30701017 10 143 2.0 0.0 1.0 5.0 170 chr3R 30700847 intergenic not near genes chr3R 30700932 intergenic not near genes chr3R 30701017 intergenic not near genes chr3R_10_30700001 chr3R_30700001 RAL-892 2384 chr3R 30791904 30791944 chr3R 30792028 30792046 17 122 5.0 3.0 4.0 3.4 142 chr3R 30791904 exon wts - chr3R 30791975 intron wts - chr3R 30792046 exon wts - chr3R_17_30790001 chr3R_30790001 RAL-892 2385 chr3R 30818790 30818835 chr3R 30820375 30820420 1360 19 1584 6.5 2.0 4.2 3.7 1630 chr3R 30818790 intron cindr + chr3R 30819605 intron cindr + chr3R 30820420 intron cindr + chr3R_19_30815001 chr3R_30815001 RAL-892 2386 chr3R 30973116 30973161 chr3R 30973297 30973341 7 180 0.5 4.0 2.2 2.2 225 chr3R 30973116 intron 5-HT7 - chr3R 30973228 intron 5-HT7 - chr3R 30973341 intron 5-HT7 - chr3R_7_30970001 chr3R_30970001 RAL-892 2387 chr3R 30978904 30978940 chr3R 30978995 30979007 5 87 4.0 1.5 2.8 1.3 103 chr3R 30978904 intron 5-HT7 - chr3R 30978956 intron 5-HT7 - chr3R 30979007 intron 5-HT7 - chr3R_5_30975001 chr3R_30975001 RAL-892 2388 chr3R 30996627 30996668 chr3R 30996868 30996912 11 239 4.5 7.5 6.0 1.6 285 chr3R 30996627 intron 5-HT7 - chr3R 30996770 intron 5-HT7 - chr3R 30996912 intron 5-HT7 - chr3R_11_30995001 chr3R_30995001 RAL-892 2389 chr3R 31069632 31069673 chr3R 31069742 31069788 21 112 3.0 1.5 2.2 6.6 156 chr3R 31069632 intron Sox100B + chr3R 31069710 intron Sox100B + chr3R 31069788 intron Sox100B + chr3R_21_31065001 chr3R_31065001 RAL-892 2390 chr3R 31074210 31074254 chr3R 31081828 31081879 springer 7 7619 3.0 0.0 1.5 2.8 7669 chr3R 31074210 intron Sox100B + chr3R 31078044 intron Sox100B + chr3R 31081879 intron Sox100B + chr3R_7_31075001 chr3R_31075001 RAL-892 2391 chr3R 31087079 31087128 chr3R 31087611 31087659 14 523 2.5 4.0 3.2 3.3 580 chr3R 31087079 intergenic not near genes chr3R 31087369 intergenic not near genes chr3R 31087659 intergenic not near genes chr3R_14_31085001 chr3R_31085001 RAL-892 2392 chr3R 31167685 31167709 chr3R 31167784 31167808 7 99 0.0 2.5 1.2 3.2 123 chr3R 31167685 intron,intron Gycbeta100B +,stops - chr3R 31167746 intron,intron Gycbeta100B +,stops - chr3R 31167808 intron,intron Gycbeta100B +,stops - chr3R_7_31165001 chr3R_31165001 RAL-892 2393 chr3R 31279366 31279404 chr3R 31285564 31285615 diver 11 6205 2.5 2.5 2.5 3.1 6249 chr3R 31279366 intergenic not near genes chr3R 31282490 intergenic not near genes chr3R 31285615 intergenic not near genes chr3R_11_31280001 chr3R_31280001 RAL-892 2394 chr3R 31413075 31413093 chr3R 31418295 31418313 copia 4 5220 3.5 3.5 3.5 0.9 5238 chr3R 31413075 intron Gprk2 + chr3R 31415694 intron Gprk2 + chr3R 31418313 intron Gprk2 + chr3R_4_31415001 chr3R_31415001 RAL-892 2395 chr3R 31413102 31413115 chr3R 31418289 31418303 copia 5 5201 3.5 3.0 3.2 1.2 5201 chr3R 31413102 intron Gprk2 + chr3R 31415702 intron Gprk2 + chr3R 31418303 intron Gprk2 + chr3R_5_31415001 chr3R_31415001 RAL-892 2396 chr3R 31422522 31422551 chr3R 31422633 31422662 4 111 4.5 2.5 3.5 0.9 140 chr3R 31422522 intron Gprk2 + chr3R 31422592 intron Gprk2 + chr3R 31422662 intron Gprk2 + chr3R_4_31420001 chr3R_31420001 RAL-892 2397 chr3R 31426860 31426911 chr3R 31426972 31426996 21 110 4.0 4.0 4.0 4.2 136 chr3R 31426860 intron Gprk2 + chr3R 31426928 intron Gprk2 + chr3R 31426996 intron Gprk2 + chr3R_21_31425001 chr3R_31425001 RAL-892 2398 chr3R 31435346 31435390 chr3R 31435514 31435562 23 170 5.0 5.5 5.2 3.7 216 chr3R 31435346 intron Gprk2 + chr3R 31435454 intron Gprk2 + chr3R 31435562 intron Gprk2 + chr3R_23_31435001 chr3R_31435001 RAL-892 2399 chr3R 31442249 31442296 chr3R 31442354 31442396 22 102 2.0 3.0 2.5 6.3 147 chr3R 31442249 intron Gprk2 + chr3R 31442322 intron Gprk2 + chr3R 31442396 intron Gprk2 + chr3R_22_31440001 chr3R_31440001 RAL-892 2400 chr3R 31446079 31446102 chr3R 31446189 31446210 5 111 3.0 4.0 3.5 1.1 131 chr3R 31446079 intron Gprk2 + chr3R 31446144 intron Gprk2 + chr3R 31446210 intron Gprk2 + chr3R_5_31445001 chr3R_31445001 RAL-892 2401 chr3R 31530830 31530847 chr3R 31531144 31531167 5 327 2.0 3.5 2.8 1.3 337 chr3R 31530830 intergenic not near genes chr3R 31530998 intergenic not near genes chr3R 31531167 intergenic not near genes chr3R_5_31530001 chr3R_31530001 RAL-892 2402 chr3R 31539322 31539357 chr3R 31539427 31539462 10 105 3.0 4.0 3.5 2.2 140 chr3R 31539322 intergenic not near genes chr3R 31539392 intergenic not near genes chr3R 31539462 intergenic not near genes chr3R_10_31535001 chr3R_31535001 RAL-892 2403 chr3R 31539844 31539879 chr3R 31539949 31539984 9 99 4.5 7.0 5.8 1.3 140 chr3R 31539844 intergenic not near genes chr3R 31539914 intergenic not near genes chr3R 31539984 intergenic not near genes chr3R_9_31535001 chr3R_31535001 RAL-892 2404 chr3R 31576126 31576170 chr3R 31576249 31576293 14 122 6.5 5.0 5.8 2.1 167 chr3R 31576126 3` UTR pygo - chr3R 31576210 3` UTR pygo - chr3R 31576293 3` UTR pygo - chr3R_14_31575001 chr3R_31575001 RAL-892 2405 chr3R 31691518 31691561 chr3R 31696303 31696347 Doc 11 4783 3.5 4.5 4.0 2.2 4829 chr3R 31691518 intergenic not near genes chr3R 31693932 intergenic not near genes chr3R 31696347 intergenic not near genes chr3R_11_31690001 chr3R_31690001 RAL-892 2406 chr3R 31699735 31699753 chr3R 31699816 31699821 4 80 2.0 3.0 2.5 1.1 86 chr3R 31699735 intergenic not near genes chr3R 31699778 intergenic not near genes chr3R 31699821 intergenic not near genes chr3R_4_31695001 chr3R_31695001 RAL-892 2407 chr3R 31827248 31827284 chr3R 31827347 31827383 9 92 5.0 2.5 3.8 1.9 135 chr3R 31827248 intron RhoGAP100F + chr3R 31827316 intron RhoGAP100F + chr3R 31827383 intron RhoGAP100F + chr3R_9_31825001 chr3R_31825001 RAL-892 2408 chr3R 31831519 31831570 chr3R 31831618 31831669 18 94 1.0 7.5 4.2 3.5 150 chr3R 31831519 intron RhoGAP100F + chr3R 31831594 intron RhoGAP100F + chr3R 31831669 intron RhoGAP100F + chr3R_18_31830001 chr3R_31830001 RAL-892 2409 chr3R 31865030 31865064 chr3R 31865128 31865175 6 106 0.0 0.5 0.2 5.0 145 chr3R 31865030 intron heph - chr3R 31865102 intron heph - chr3R 31865175 exon heph - chr3R_6_31865001 chr3R_31865001 RAL-892 2410 chr3R 31897827 31897879 chr3R 31897986 31898027 12 152 1.0 1.5 1.2 5.5 200 chr3R 31897827 intron heph - chr3R 31897927 intron heph - chr3R 31898027 intron heph - chr3R_12_31895001 chr3R_31895001 RAL-892 2411 chr3R 31911666 31911708 chr3R 31911769 31911809 17 102 2.5 4.0 3.2 4.0 143 chr3R 31911666 intron heph - chr3R 31911738 intron heph - chr3R 31911809 intron heph - chr3R_17_31910001 chr3R_31910001 RAL-892 2412 chr3R 31930545 31930592 chr3R 31930642 31930694 10 98 2.0 3.0 2.5 2.9 149 chr3R 31930545 intron heph - chr3R 31930620 intron heph - chr3R 31930694 intron heph - chr3R_10_31930001 chr3R_31930001 RAL-892 2413 chr3R 31931175 31931215 chr3R 31931277 31931304 12 102 3.5 5.0 4.2 2.3 129 chr3R 31931175 intron heph - chr3R 31931240 intron heph - chr3R 31931304 intron heph - chr3R_12_31930001 chr3R_31930001 RAL-892 2414 chr3R 31957958 31958012 chr3R 31958060 31958114 9 101 0.5 1.5 1.0 4.5 156 chr3R 31957958 intron heph - chr3R 31958036 intron heph - chr3R 31958114 intron heph - chr3R_9_31955001 chr3R_31955001 RAL-892 2415 chr3R 31986251 31986259 chr3R 31986708 31986741 4 476 4.0 5.0 4.5 0.7 490 chr3R 31986251 intron,intron heph -,CG2003 + chr3R 31986496 intron,intron heph -,CG2003 + chr3R 31986741 intron,intron heph -,CG2003 + chr3R_4_31985001 chr3R_31985001 RAL-892 2416 chr3R 31997975 31998025 chr3R 32005464 32005500 blood 15 7488 1.5 5.5 3.5 3.3 7525 chr3R 31997975 intron heph - chr3R 32001738 intron heph - chr3R 32005500 intron heph - chr3R_15_32000001 chr3R_32000001 RAL-892 2417 chr3R 32016688 32016736 chr3R 32016787 32016834 9 97 4.5 2.0 3.2 2.1 146 chr3R 32016688 5` UTR CR45557 + chr3R 32016761 5` UTR CR45557 + chr3R 32016834 5` UTR CR45557 + chr3R_9_32015001 chr3R_32015001 RAL-892 2418 chr3R 32034251 32034291 chr3R 32034354 32034389 10 100 4.5 9.0 6.8 1.3 138 chr3R 32034251 intergenic not near genes chr3R 32034320 intergenic not near genes chr3R 32034389 intergenic not near genes chr3R_10_32030001 chr3R_32030001 RAL-892 2419 chr3R 32039611 32039666 chr3R 32039710 32039718 15 91 4.5 7.0 5.8 2.2 107 chr3R 32039611 3` UTR CG2053 + chr3R 32039664 3` UTR CG2053 + chr3R 32039718 3` UTR CG2053 + chr3R_15_32035001 chr3R_32035001 RAL-892 2420 chr3R 32061690 32061723 chr3R 32062014 32062047 12 324 35.0 21.0 28.0 0.4 357 chr3R 32061690 intron Map205 - chr3R 32061868 intron Map205 - chr3R 32062047 intron Map205 - chr3R_12_32060001 chr3R_32060001 RAL-892 2421 chr4 76480 76513 chr4 81943 81976 I-element 10 5462 5.0 3.0 4.0 2.0 5496 chr4 76480 intron pan + chr4 79228 intron pan + chr4 81976 intron pan + chr4_10_75001 chr4_75001 RAL-892 2422 chr4 97407 97433 chr4 97523 97549 8 112 0.0 14.0 7.0 1.0 142 chr4 97407 intron pan + chr4 97478 intron pan + chr4 97549 intron pan + chr4_8_95001 chr4_95001 RAL-892 2423 chr4 97479 97525 chr4 97592 97639 12 113 21.0 28.5 24.8 0.5 160 chr4 97479 intron pan + chr4 97559 intron pan + chr4 97639 intron pan + chr4_12_95001 chr4_95001 RAL-892 2424 chr4 220578 220626 chr4 220729 220777 21 151 4.5 6.0 5.2 3.4 199 chr4 220578 intron CG31999 - chr4 220678 intron CG31999 - chr4 220777 intron CG31999 - chr4_21_220001 chr4_220001 RAL-892 2425 chr4 257385 257435 chr4 257575 257625 12 190 3.0 4.5 3.8 2.5 240 chr4 257385 exon RhoGAP102A + chr4 257505 intron RhoGAP102A + chr4 257625 intron RhoGAP102A + chr4_12_255001 chr4_255001 RAL-892 2426 chr4 280783 280803 chr4 281433 281453 5 650 10.0 5.5 7.8 0.6 670 chr4 280783 intron Syt7 - chr4 281118 intron Syt7 - chr4 281453 intron Syt7 - chr4_5_280001 chr4_280001 RAL-892 2427 chr4 314500 314530 chr4 314598 314628 7 97 3.0 4.0 3.5 1.6 128 chr4 314500 intergenic Zip102B -,CG32850 + chr4 314564 intergenic CG32850 +,Zip102B - chr4 314628 intergenic CG32850 + chr4_7_310001 chr4_310001 RAL-892 2428 chr4 319972 320020 chr4 328168 328216 Stalker2 14 8196 4.0 8.0 6.0 2.0 8244 chr4 319972 3` UTR CG32850 + chr4 324094 intron CG32850 + chr4 328216 3` UTR,3` UTR CG32850 +,PMCA - chr4_14_320001 chr4_320001 RAL-892 2429 chr4 368689 368709 chr4 368841 368861 7 152 7.0 4.0 5.5 1.1 172 chr4 368689 intron Hcf + chr4 368775 intron Hcf + chr4 368861 intron Hcf + chr4_7_365001 chr4_365001 RAL-892 2430 chr4 419464 419512 chr4 419675 419724 4 211 34.5 25.5 30.0 0.1 260 chr4 419464 intergenic not near genes chr4 419594 intergenic not near genes chr4 419724 intergenic not near genes chr4_4_415001 chr4_415001 RAL-892 2431 chr4 520200 520240 chr4 520312 520352 14 110 3.5 5.5 4.5 2.5 152 chr4 520200 intron zfh2 + chr4 520276 intron zfh2 + chr4 520352 intron zfh2 + chr4_14_520001 chr4_520001 RAL-892 2432 chr4 649904 649906 chr4 650011 650012 4 107 12.0 5.5 8.8 0.4 108 chr4 649904 3` UTR gw - chr4 649958 3` UTR gw - chr4 650012 3` UTR gw - chr4_4_645001 chr4_645001 RAL-892 2433 chr4 649907 649924 chr4 650009 650031 8 104 7.5 5.5 6.5 1.1 124 chr4 649907 3` UTR gw - chr4 649969 3` UTR gw - chr4 650031 3` UTR gw - chr4_8_645001 chr4_645001 RAL-892 2434 chr4 671587 671625 chr4 680190 680214 Tirant 9 8600 5.5 4.5 5.0 1.5 8627 chr4 671587 intron CG11360 + chr4 675900 intron CG11360 + chr4 680214 intron CG11360 + chr4_9_675001 chr4_675001 RAL-892 2435 chr4 799796 799826 chr4 799890 799936 6 106 2.0 2.5 2.2 1.9 140 chr4 799796 exon CG11231 + chr4 799866 exon CG11231 + chr4 799936 3` UTR CG11231 + chr4_6_795001 chr4_795001 RAL-892 2436 chr4 896768 896818 chr4 896864 896916 21 97 0.0 1.0 0.5 14.0 148 chr4 896768 intron unc-13 - chr4 896842 intron unc-13 - chr4 896916 intron unc-13 - chr4_21_895001 chr4_895001 RAL-892 2437 chr4 905546 905589 chr4 905648 905691 9 102 6.5 5.0 5.8 1.3 145 chr4 905546 5` UTR unc-13 - chr4 905618 5` UTR unc-13 - chr4 905691 5` UTR unc-13 - chr4_9_905001 chr4_905001 RAL-892 2438 chr4 1134146 1134189 chr4 1135074 1135119 16 930 5.0 3.5 4.2 3.1 973 chr4 1134146 intron CG11155 + chr4 1134632 intron CG11155 + chr4 1135119 exon CG11155 + chr4_16_1130001 chr4_1130001 RAL-892 2439 chr4 1135862 1135904 chr4 1136218 1136260 INE-1 7 356 26.5 21.5 24.0 0.3 398 chr4 1135862 3` UTR CG11155 + chr4 1136061 3` UTR CG11155 + chr4 1136260 3` UTR CG11155 + chr4_7_1135001 chr4_1135001 RAL-892 2440 chr4 1231213 1231255 chr4 1231365 1231390 13 150 6.5 2.5 4.5 2.4 177 chr4 1231213 intron Caps + chr4 1231302 intron Caps + chr4 1231390 intron Caps + chr4_13_1230001 chr4_1230001 RAL-892 2441 chr4 1250561 1250582 chr4 1250667 1250686 5 105 4.5 6.0 5.2 0.8 125 chr4 1250561 intron Caps + chr4 1250624 intron Caps + chr4 1250686 intron Caps + chr4_5_1250001 chr4_1250001 RAL-892 2442 chrX 295837 295882 chrX 303477 303521 412 6 7640 4.5 3.0 3.8 1.2 7684 chrX 295837 intron CG3777 + chrX 299679 intron CG3777 + chrX 303521 intron CG3777 + chrX_6_295001 chrX_295001 RAL-892 2443 chrX 318473 318493 chrX 323562 323599 flea 5 5102 5.5 7.0 6.2 0.7 5126 chrX 318473 intron,intron CG3777 +,CG32816 - chrX 321036 intron,intron CG3777 +,CG32816 - chrX 323599 intron,intron CG3777 +,CG32816 - chrX_5_320001 chrX_320001 RAL-892 2444 chrX 367022 367069 chrX 367139 367186 15 117 2.0 2.0 2.0 5.0 164 chrX 367022 intron,5` UTR CG32816 -,yar + chrX 367104 intron CG32816 - chrX 367186 intron CG32816 - chrX_15_365001 chrX_365001 RAL-892 2445 chrX 428410 428452 chrX 434615 434657 3S18 9 6203 4.0 7.5 5.8 1.3 6247 chrX 428410 intron CG32816 - chrX 431534 intron CG32816 - chrX 434657 intron CG32816 - chrX_9_430001 chrX_430001 RAL-892 2446 chrX 440974 441017 chrX 441072 441114 11 98 3.0 2.5 2.8 2.9 140 chrX 440974 intron CG32816 - chrX 441044 intron CG32816 - chrX 441114 intron CG32816 - chrX_11_440001 chrX_440001 RAL-892 2447 chrX 443476 443524 chrX 443578 443626 14 98 1.5 2.5 2.0 4.7 150 chrX 443476 intron CG32816 - chrX 443551 intron CG32816 - chrX 443626 intron CG32816 - chrX_14_440001 chrX_440001 RAL-892 2448 chrX 450353 450393 chrX 450451 450491 7 98 4.0 5.0 4.5 1.3 138 chrX 450353 intron CG32816 - chrX 450422 intron CG32816 - chrX 450491 intron CG32816 - chrX_7_450001 chrX_450001 RAL-892 2449 chrX 569337 569375 chrX 569457 569468 6 116 1.5 4.0 2.8 1.6 131 chrX 569337 intron Appl + chrX 569402 intron Appl + chrX 569468 intron Appl + chrX_6_565001 chrX_565001 RAL-892 2450 chrX 611115 611163 chrX 611225 611273 19 109 3.0 3.5 3.2 4.5 158 chrX 611115 intron CG13366 - chrX 611194 intron CG13366 - chrX 611273 intron CG13366 - chrX_19_610001 chrX_610001 RAL-892 2451 chrX 667643 667684 chrX 667747 667788 8 104 2.0 1.0 1.5 3.2 145 chrX 667643 intergenic not near genes chrX 667716 intergenic not near genes chrX 667788 intergenic not near genes chrX_8_665001 chrX_665001 RAL-892 2452 chrX 680827 680843 chrX 680924 680946 4 100 6.0 0.0 3.0 1.0 119 chrX 680827 intergenic not near genes chrX 680886 intergenic not near genes chrX 680946 intergenic not near genes chrX_4_680001 chrX_680001 RAL-892 2453 chrX 680845 680867 chrX 680922 680956 4 93 4.5 0.0 2.2 1.2 111 chrX 680845 intergenic not near genes chrX 680900 intergenic not near genes chrX 680956 intergenic not near genes chrX_4_680001 chrX_680001 RAL-892 2454 chrX 695290 695315 chrX 695373 695407 7 91 2.0 3.0 2.5 2.0 117 chrX 695290 intron sdk + chrX 695348 intron sdk + chrX 695407 intron sdk + chrX_7_695001 chrX_695001 RAL-892 2455 chrX 706777 706828 chrX 707169 707212 8 377 0.0 5.5 2.8 2.1 435 chrX 706777 intron sdk + chrX 706994 intron sdk + chrX 707212 intron sdk + chrX_8_705001 chrX_705001 RAL-892 2456 chrX 715280 715316 chrX 715355 715389 4 75 0.0 2.5 1.2 1.8 109 chrX 715280 intron sdk + chrX 715334 intron sdk + chrX 715389 intron sdk + chrX_4_715001 chrX_715001 RAL-892 2457 chrX 778110 778154 chrX 778220 778263 11 108 2.5 0.0 1.2 5.0 153 chrX 778110 intron fz3 + chrX 778186 intron fz3 + chrX 778263 intron fz3 + chrX_11_775001 chrX_775001 RAL-892 2458 chrX 780588 780593 chrX 780670 780689 4 92 4.5 0.0 2.2 1.2 101 chrX 780588 intron fz3 + chrX 780638 intron fz3 + chrX 780689 intron fz3 + chrX_4_780001 chrX_780001 RAL-892 2459 chrX 806782 806811 chrX 806886 806891 7 103 3.0 2.0 2.5 2.0 109 chrX 806782 intron Sec22 + chrX 806836 intron Sec22 + chrX 806891 intron Sec22 + chrX_7_805001 chrX_805001 RAL-892 2460 chrX 812257 812296 chrX 817901 817943 297 6 5644 5.5 8.0 6.8 0.8 5686 chrX 812257 intron CG43867 - chrX 815100 intron CG43867 - chrX 817943 intron CG43867 - chrX_6_815001 chrX_815001 RAL-892 2461 chrX 827582 827634 chrX 835393 835398 roo 12 7813 4.5 0.0 2.2 3.8 7816 chrX 827582 intron CG43867 - chrX 831490 intron CG43867 - chrX 835398 intron CG43867 - chrX_12_830001 chrX_830001 RAL-892 2462 chrX 855286 855314 chrX 12649914 12649919 6 11794621 4.0 4.5 4.2 1.2 11794633 chrX 855286 intron CG43867 - chrX 6752602 intron CG14439 + chrX 12649919 intron Tomosyn + chrX_6_6750001 chrX_6750001 RAL-892 2463 chrX 891286 891337 chrX 892067 892119 16 783 19.0 15.0 17.0 0.9 833 chrX 891286 intron CG43867 - chrX 891702 intron CG43867 - chrX 892119 intron CG43867 - chrX_16_890001 chrX_890001 RAL-892 2464 chrX 906683 906717 chrX 908492 908526 S-element 6 1809 6.5 9.0 7.8 0.7 1843 chrX 906683 intron CG43867 - chrX 907604 intron CG43867 - chrX 908526 intron CG43867 - chrX_6_905001 chrX_905001 RAL-892 2465 chrX 918364 918377 chrX 918462 918471 6 98 4.0 2.5 3.2 1.4 107 chrX 918364 intron CG43867 - chrX 918418 intron CG43867 - chrX 918471 intron CG43867 - chrX_6_915001 chrX_915001 RAL-892 2466 chrX 918379 918409 chrX 918458 918513 5 92 0.0 2.5 1.2 2.3 134 chrX 918379 intron CG43867 - chrX 918446 intron CG43867 - chrX 918513 intron CG43867 - chrX_5_915001 chrX_915001 RAL-892 2467 chrX 1051060 1051087 chrX 1051153 1051185 8 97 6.5 5.0 5.8 1.2 125 chrX 1051060 intron CR44779 + chrX 1051122 intron CR44779 + chrX 1051185 intron CR44779 + chrX_8_1050001 chrX_1050001 RAL-892 2468 chrX 1357758 1357797 chrX 1367948 1367987 Doc 9 10190 5.5 4.5 5.0 1.5 10229 chrX 1357758 intergenic png - chrX 1362872 intergenic not near genes chrX 1367987 intergenic not near genes chrX_9_1360001 chrX_1360001 RAL-892 2469 chrX 1518034 1518070 chrX 1523442 1523492 jockey 7 5420 2.0 4.5 3.2 1.7 5458 chrX 1518034 intergenic inc + chrX 1520763 intergenic not near genes chrX 1523492 intergenic not near genes chrX_7_1520001 chrX_1520001 RAL-892 2470 chrX 1845716 1845754 chrX 1845836 1845873 12 114 6.5 1.0 3.8 2.5 157 chrX 1845716 intron CG42666 + chrX 1845794 intron CG42666 + chrX 1845873 intron CG42666 + chrX_12_1845001 chrX_1845001 RAL-892 2471 chrX 1930529 1930570 chrX 1938120 1938161 opus 5 7591 2.5 7.5 5.0 0.8 7632 chrX 1930529 intergenic CG11596 + chrX 1934345 intergenic not near genes chrX 1938161 3` UTR CG3857 - chrX_5_1930001 chrX_1930001 RAL-892 2472 chrX 1954882 1954916 chrX 1962827 1962876 Stalker2 5 7943 1.0 2.0 1.5 2.0 7994 chrX 1954882 intron Hr4 + chrX 1958879 intron Hr4 + chrX 1962876 intron Hr4 + chrX_5_1955001 chrX_1955001 RAL-892 2473 chrX 2146646 2146683 chrX 2146748 2146781 4 106 2.5 6.5 4.5 0.7 135 chrX 2146646 intron Pgd + chrX 2146714 intron Pgd + chrX 2146781 intron Pgd + chrX_4_2145001 chrX_2145001 RAL-892 2474 chrX 2212720 2212752 chrX 2212803 2212849 5 94 3.0 3.0 3.0 1.2 129 chrX 2212720 intron msta - chrX 2212784 intron msta - chrX 2212849 intron msta - chrX_5_2210001 chrX_2210001 RAL-892 2475 chrX 2578798 2578844 chrX 2578909 2578942 12 108 1.0 1.5 1.2 5.5 144 chrX 2578798 intergenic Pdfr +,Vha36-3 - chrX 2578870 intergenic Vha36-3 -,Pdfr + chrX 2578942 intergenic Vha36-3 -,Pdfr + chrX_12_2575001 chrX_2575001 RAL-892 2476 chrX 2807342 2807369 chrX 2807457 2807484 7 115 5.0 1.5 3.2 1.7 142 chrX 2807342 intron kirre + chrX 2807413 intron kirre + chrX 2807484 intron kirre + chrX_7_2805001 chrX_2805001 RAL-892 2477 chrX 2844880 2844933 chrX 2852310 2852353 mdg1 10 7429 4.0 3.0 3.5 2.2 7473 chrX 2844880 intron kirre + chrX 2848616 intron kirre + chrX 2852353 intron kirre + chrX_10_2845001 chrX_2845001 RAL-892 2478 chrX 2972018 2972052 chrX 2972177 2972212 4 160 4.5 7.5 6.0 0.6 194 chrX 2972018 intron,intron kirre +,rst - chrX 2972115 intron,intron kirre +,rst - chrX 2972212 intron,intron kirre +,rst - chrX_4_2970001 chrX_2970001 RAL-892 2479 chrX 3058001 3058037 chrX 3058262 3058297 pogo 9 261 5.5 3.0 4.2 1.7 296 chrX 3058001 intron kirre + chrX 3058149 intron kirre + chrX 3058297 intron kirre + chrX_9_3055001 chrX_3055001 RAL-892 2480 chrX 3075617 3075663 chrX 3080944 3080989 Transpac 10 5325 2.5 2.0 2.2 3.1 5372 chrX 3075617 intron kirre + chrX 3078303 intron kirre + chrX 3080989 intron kirre + chrX_10_3075001 chrX_3075001 RAL-892 2481 chrX 3109425 3109476 chrX 3109521 3109572 15 97 5.0 3.0 4.0 3.0 147 chrX 3109425 intron kirre + chrX 3109498 intron kirre + chrX 3109572 intron kirre + chrX_15_3105001 chrX_3105001 RAL-892 2482 chrX 3193312 3193353 chrX 3193412 3193454 10 101 2.5 3.5 3.0 2.5 142 chrX 3193312 intron dnc + chrX 3193383 intron dnc + chrX 3193454 intron dnc + chrX_10_3190001 chrX_3190001 RAL-892 2483 chrX 3218490 3218530 chrX 3227659 3227698 roo 8 9169 5.5 2.0 3.8 1.7 9208 chrX 3218490 intron dnc + chrX 3223094 intron dnc + chrX 3227698 intron dnc + chrX_8_3220001 chrX_3220001 RAL-892 2484 chrX 3243617 3243649 chrX 3243727 3243759 9 110 7.0 6.5 6.8 1.2 142 chrX 3243617 intron dnc + chrX 3243688 intron dnc + chrX 3243759 intron dnc + chrX_9_3240001 chrX_3240001 RAL-892 2485 chrX 3270275 3270299 chrX 3270375 3270399 7 100 1.0 3.0 2.0 2.3 124 chrX 3270275 intron dnc + chrX 3270337 intron dnc + chrX 3270399 intron dnc + chrX_7_3270001 chrX_3270001 RAL-892 2486 chrX 3306325 3306375 chrX 3306427 3306477 11 101 3.5 1.5 2.5 3.1 152 chrX 3306325 intron dnc + chrX 3306401 intron dnc + chrX 3306477 intron dnc + chrX_11_3305001 chrX_3305001 RAL-892 2487 chrX 3322641 3322659 chrX 3322736 3322737 5 91 1.5 4.0 2.8 1.3 96 chrX 3322641 intron,intron dnc +,CR44886 - chrX 3322689 intron,intron dnc +,CR44886 - chrX 3322737 intron,intron dnc +,CR44886 - chrX_5_3320001 chrX_3320001 RAL-892 2488 chrX 3409008 3409017 chrX 3409078 3409098 7 88 0.0 4.0 2.0 2.3 90 chrX 3409008 intron,intron CR44999 +,CG12535 - chrX 3409053 intron,intron CR44999 +,CG12535 - chrX 3409098 intron,intron CR44999 +,CG12535 - chrX_7_3405001 chrX_3405001 RAL-892 2489 chrX 3414999 3415033 chrX 3421205 3421236 3S18 4 6202 7.0 3.5 5.2 0.6 6237 chrX 3414999 intron,intron CR44999 +,CG12535 - chrX 3418118 intron,intron CR44999 +,CG12535 - chrX 3421236 intron,intron CR44999 +,CG12535 - chrX_4_3415001 chrX_3415001 RAL-892 2490 chrX 3459968 3460014 chrX 3460065 3460111 12 94 5.5 1.5 3.5 2.7 143 chrX 3459968 intron,intron CR44999 +,CG16782 - chrX 3460040 intron,5` UTR CR44999 +,CG16782 - chrX 3460111 intron,5` UTR CR44999 +,CG16782 - chrX_12_3460001 chrX_3460001 RAL-892 2491 chrX 3493079 3493121 chrX 3502258 3502295 roo 5 9178 2.0 1.0 1.5 2.0 9216 chrX 3493079 intron,intron CR44999 +,Gas8 - chrX 3497687 intron,intron CR44999 +,Gas8 - chrX 3502295 intron,intron CR44999 +,Gas8 - chrX_5_3495001 chrX_3495001 RAL-892 2492 chrX 3703689 3703705 chrX 3703797 3703811 6 107 8.5 6.5 7.5 0.7 122 chrX 3703689 intergenic CR45102 + chrX 3703750 intergenic CR45102 + chrX 3703811 intergenic not near genes chrX_6_3700001 chrX_3700001 RAL-892 2493 chrX 3726749 3726762 chrX 3730165 3730168 NOF 5 3415 5.0 0.0 2.5 1.4 3419 chrX 3726749 intron tlk + chrX 3728458 intron tlk + chrX 3730168 intron tlk + chrX_5_3725001 chrX_3725001 RAL-892 2494 chrX 3731018 3731058 chrX 3731131 3731172 10 117 4.5 2.5 3.5 2.2 154 chrX 3731018 intron tlk + chrX 3731095 intron tlk + chrX 3731172 intron tlk + chrX_10_3730001 chrX_3730001 RAL-892 2495 chrX 3862810 3862848 chrX 3862917 3862955 9 107 3.5 3.5 3.5 2.0 145 chrX 3862810 intergenic yin - chrX 3862882 intergenic yin - chrX 3862955 intergenic yin - chrX_9_3860001 chrX_3860001 RAL-892 2496 chrX 3866101 3866135 chrX 3866184 3866228 12 93 2.0 0.0 1.0 6.0 127 chrX 3866101 intron yin - chrX 3866164 intron yin - chrX 3866228 intron yin - chrX_12_3865001 chrX_3865001 RAL-892 2497 chrX 3874718 3874773 chrX 3874819 3874844 14 92 4.0 3.5 3.8 2.9 126 chrX 3874718 intron CG2930 + chrX 3874781 intron CG2930 + chrX 3874844 intron CG2930 + chrX_14_3870001 chrX_3870001 RAL-892 2498 chrX 3880438 3880488 chrX 3880544 3880594 6 106 3.0 3.5 3.2 1.4 156 chrX 3880438 intergenic VhaAC39-1 + chrX 3880516 intergenic VhaAC39-1 + chrX 3880594 intergenic VhaAC39-1 + chrX_6_3880001 chrX_3880001 RAL-892 2499 chrX 3881253 3881303 chrX 3881412 3881462 14 158 2.5 3.5 3.0 3.5 209 chrX 3881253 intron VhaAC39-1 + chrX 3881358 intron VhaAC39-1 + chrX 3881462 exon VhaAC39-1 + chrX_14_3880001 chrX_3880001 RAL-892 2500 chrX 3915507 3915545 chrX 3915614 3915652 6 107 5.0 6.0 5.5 0.9 145 chrX 3915507 intron CG42541 - chrX 3915580 intron CG42541 - chrX 3915652 intron CG42541 - chrX_6_3915001 chrX_3915001 RAL-892 2501 chrX 3986842 3986893 chrX 3994495 3994546 412 12 7652 2.5 3.5 3.0 3.0 7704 chrX 3986842 intergenic not near genes chrX 3990694 intergenic not near genes chrX 3994546 intergenic not near genes chrX_12_3990001 chrX_3990001 RAL-892 2502 chrX 4101861 4101898 chrX 4101948 4101998 6 98 0.5 4.0 2.2 1.9 137 chrX 4101861 exon CG15375 + chrX 4101930 exon CG15375 + chrX 4101998 exon CG15375 + chrX_6_4100001 chrX_4100001 RAL-892 2503 chrX 4157879 4157919 chrX 4164952 4164992 297 7 7073 4.5 4.0 4.2 1.3 7113 chrX 4157879 intron Fas2 - chrX 4161436 intron Fas2 - chrX 4164992 intron Fas2 - chrX_7_4160001 chrX_4160001 RAL-892 2504 chrX 4209907 4209954 chrX 4210017 4210064 4 110 0.0 4.0 2.0 1.3 157 chrX 4209907 intergenic not near genes chrX 4209986 intergenic not near genes chrX 4210064 intergenic not near genes chrX_4_4205001 chrX_4205001 RAL-892 2505 chrX 4216326 4216336 chrX 4216424 4216435 5 99 4.0 8.5 6.2 0.7 109 chrX 4216326 intergenic not near genes chrX 4216380 intergenic CG15571 - chrX 4216435 intergenic CG15571 - chrX_5_4215001 chrX_4215001 RAL-892 2506 chrX 4324373 4324412 chrX 4324470 4324509 12 95 2.5 2.0 2.2 3.8 136 chrX 4324373 intron norpA + chrX 4324441 intron norpA + chrX 4324509 intron norpA + chrX_12_4320001 chrX_4320001 RAL-892 2507 chrX 4382473 4382479 chrX 4382910 4382916 4 437 0.0 5.5 2.8 1.1 443 chrX 4382473 intergenic CG12688 + chrX 4382694 intergenic CG12688 + chrX 4382916 intergenic CG12688 + chrX_4_4380001 chrX_4380001 RAL-892 2508 chrX 4396968 4397006 chrX 4397058 4397061 10 97 2.5 1.5 2.0 3.3 93 chrX 4396968 intron CR32773 - chrX 4397014 intron CR32773 - chrX 4397061 intron CR32773 - chrX_10_4395001 chrX_4395001 RAL-892 2509 chrX 4436444 4436496 chrX 4436540 4436598 4 99 2.5 1.0 1.8 1.4 154 chrX 4436444 intron,intron CR32773 -,bi + chrX 4436521 intron,intron CR32773 -,bi + chrX 4436598 intron,intron CR32773 -,bi + chrX_4_4435001 chrX_4435001 RAL-892 2510 chrX 4525735 4525769 chrX 4525847 4525881 9 112 3.5 4.5 4.0 1.8 146 chrX 4525735 intron CR32773 - chrX 4525808 intron CR32773 - chrX 4525881 intron CR32773 - chrX_9_4525001 chrX_4525001 RAL-892 2511 chrX 4700377 4700425 chrX 4700740 4700788 jockey 8 363 2.0 4.5 3.2 1.9 411 chrX 4700377 3` UTR ctp + chrX 4700582 3` UTR ctp + chrX 4700788 3` UTR ctp + chrX_8_4700001 chrX_4700001 RAL-892 2512 chrX 4723571 4723585 chrX 4723664 4723672 5 92 2.0 4.5 3.2 1.2 101 chrX 4723571 intron Proc-R + chrX 4723622 intron Proc-R + chrX 4723672 intron Proc-R + chrX_5_4720001 chrX_4720001 RAL-892 2513 chrX 4731804 4731829 chrX 4736907 4736916 jockey 5 5100 3.5 2.0 2.8 1.3 5112 chrX 4731804 intergenic not near genes chrX 4734360 intergenic not near genes chrX 4736916 intergenic not near genes chrX_5_4730001 chrX_4730001 RAL-892 2514 chrX 4757364 4757399 chrX 4757463 4757498 5 97 0.5 3.5 2.0 1.7 134 chrX 4757364 intergenic not near genes chrX 4757431 intergenic not near genes chrX 4757498 intergenic not near genes chrX_5_4755001 chrX_4755001 RAL-892 2515 chrX 4763240 4763281 chrX 4763745 4763789 Stalker4 14 507 2.0 4.5 3.2 3.3 549 chrX 4763240 intergenic not near genes chrX 4763514 intergenic not near genes chrX 4763789 intergenic not near genes chrX_14_4760001 chrX_4760001 RAL-892 2516 chrX 4792359 4792399 chrX 4792812 4792852 jockey 7 451 3.5 5.0 4.2 1.3 493 chrX 4792359 intergenic not near genes chrX 4792606 intergenic not near genes chrX 4792852 intergenic not near genes chrX_7_4790001 chrX_4790001 RAL-892 2517 chrX 4827993 4828002 chrX 4835342 4835393 Stalker4 5 7375 2.5 3.5 3.0 1.2 7400 chrX 4827993 intergenic not near genes chrX 4831693 intergenic not near genes chrX 4835393 intergenic not near genes chrX_5_4830001 chrX_4830001 RAL-892 2518 chrX 4990034 4990070 chrX 4997268 4997304 roo 9 7234 4.0 1.5 2.8 2.4 7270 chrX 4990034 intron CR44833 - chrX 4993669 intron CR44833 - chrX 4997304 intron CR44833 - chrX_9_4990001 chrX_4990001 RAL-892 2519 chrX 5049559 5049606 chrX 5049667 5049714 4 108 2.0 2.0 2.0 1.3 155 chrX 5049559 intron,intron CR44833 -,ovo + chrX 5049636 intron,intron CR44833 -,ovo + chrX 5049714 intron,intron CR44833 -,ovo + chrX_4_5045001 chrX_5045001 RAL-892 2520 chrX 5096256 5096301 chrX 5103841 5103886 springer 8 7585 2.0 4.0 3.0 2.0 7630 chrX 5096256 intron,intron CG15465 +,rg + chrX 5100071 intron,intron CG15465 +,rg + chrX 5103886 intron,intron CG15465 +,rg + chrX_8_5100001 chrX_5100001 RAL-892 2521 chrX 5170126 5170143 chrX 5170244 5170256 4 114 2.0 6.5 4.2 0.8 130 chrX 5170126 intron,intron CG15465 +,rg + chrX 5170191 intron,intron CG15465 +,rg + chrX 5170256 intron,intron CG15465 +,rg + chrX_4_5170001 chrX_5170001 RAL-892 2522 chrX 5291490 5291496 chrX 5291593 5291594 4 101 6.0 2.0 4.0 0.8 104 chrX 5291490 intergenic not near genes chrX 5291542 intergenic not near genes chrX 5291594 intergenic not near genes chrX_4_5290001 chrX_5290001 RAL-892 2523 chrX 5345435 5345470 chrX 5345567 5345602 11 131 2.5 3.5 3.0 2.8 167 chrX 5345435 intron SK + chrX 5345518 intron SK + chrX 5345602 intron SK + chrX_11_5345001 chrX_5345001 RAL-892 2524 chrX 5349260 5349303 chrX 5349352 5349400 13 97 5.0 5.0 5.0 2.2 140 chrX 5349260 intron SK + chrX 5349330 intron SK + chrX 5349400 intron SK + chrX_13_5345001 chrX_5345001 RAL-892 2525 chrX 5473568 5473618 chrX 5473664 5473686 16 91 1.0 2.0 1.5 6.4 118 chrX 5473568 intron SPR + chrX 5473627 intron SPR + chrX 5473686 intron SPR + chrX_16_5470001 chrX_5470001 RAL-892 2526 chrX 5524824 5524859 chrX 5528703 5528742 412 4 3881 5.0 0.0 2.5 1.1 3918 chrX 5524824 intergenic snoRNA:Psi28S-3342 - chrX 5526783 intergenic not near genes chrX 5528742 intergenic Vsx2 - chrX_4_5525001 chrX_5525001 RAL-892 2527 chrX 5541551 5541603 chrX 5541652 5541685 9 93 3.0 0.5 1.8 3.2 134 chrX 5541551 intron Vsx2 - chrX 5541618 intron Vsx2 - chrX 5541685 intron Vsx2 - chrX_9_5540001 chrX_5540001 RAL-892 2528 chrX 5883809 5883840 chrX 5884065 5884101 pogo 8 260 3.5 4.5 4.0 1.6 292 chrX 5883809 intron CR45668 - chrX 5883955 intron CR45668 - chrX 5884101 intron CR45668 - chrX_8_5880001 chrX_5880001 RAL-892 2529 chrX 5884142 5884191 chrX 5884403 5884452 pogo 12 261 3.0 2.0 2.5 3.4 310 chrX 5884142 intron CR45668 - chrX 5884297 intron CR45668 - chrX 5884452 intron CR45668 - chrX_12_5880001 chrX_5880001 RAL-892 2530 chrX 6003274 6003308 chrX 6003375 6003409 6 98 2.5 4.0 3.2 1.4 135 chrX 6003274 intron CR44498 + chrX 6003342 intron CR44498 + chrX 6003409 intron CR44498 + chrX_6_6000001 chrX_6000001 RAL-892 2531 chrX 6118678 6118731 chrX 6118779 6118833 11 101 2.0 1.5 1.8 3.9 155 chrX 6118678 intron Ca-alpha1T - chrX 6118756 intron Ca-alpha1T - chrX 6118833 intron Ca-alpha1T - chrX_11_6115001 chrX_6115001 RAL-892 2532 chrX 6164281 6164323 chrX 6164387 6164409 6 103 2.0 2.0 2.0 2.0 128 chrX 6164281 intron Ca-alpha1T - chrX 6164345 intron Ca-alpha1T - chrX 6164409 intron Ca-alpha1T - chrX_6_6160001 chrX_6160001 RAL-892 2533 chrX 6171594 6171608 chrX 6179020 6179061 Quasimodo 6 7448 1.5 3.0 2.2 1.9 7467 chrX 6171594 intron Ca-alpha1T - chrX 6175328 intron Ca-alpha1T - chrX 6179061 intron Ca-alpha1T - chrX_6_6175001 chrX_6175001 RAL-892 2534 chrX 6215515 6215529 chrX 6215612 6215630 4 96 7.5 5.5 6.5 0.5 115 chrX 6215515 intergenic not near genes chrX 6215572 intergenic not near genes chrX 6215630 intergenic not near genes chrX_4_6215001 chrX_6215001 RAL-892 2535 chrX 6312171 6312223 chrX 6312274 6312325 19 102 5.0 4.5 4.8 3.3 154 chrX 6312171 intron CG15894 + chrX 6312248 intron CG15894 + chrX 6312325 intron CG15894 + chrX_19_6310001 chrX_6310001 RAL-892 2536 chrX 6315143 6315187 chrX 6315293 6315337 9 148 6.5 3.5 5.0 1.5 194 chrX 6315143 intron CG15894 + chrX 6315240 intron CG15894 + chrX 6315337 intron CG15894 + chrX_9_6315001 chrX_6315001 RAL-892 2537 chrX 6335212 6335239 chrX 6337742 6337768 Tirant 7 2530 0.0 6.5 3.2 1.7 2556 chrX 6335212 intergenic not near genes chrX 6336490 intergenic not near genes chrX 6337768 5` UTR CG3842 + chrX_7_6335001 chrX_6335001 RAL-892 2538 chrX 6392851 6392870 chrX 6397636 6397655 Doc 4 4784 7.5 7.5 7.5 0.5 4804 chrX 6392851 intergenic not near genes chrX 6395253 intergenic not near genes chrX 6397655 intergenic not near genes chrX_4_6395001 chrX_6395001 RAL-892 2539 chrX 6392873 6392893 chrX 6397634 6397678 Doc 5 4779 2.0 7.5 4.8 0.9 4805 chrX 6392873 intergenic not near genes chrX 6395276 intergenic not near genes chrX 6397678 intergenic not near genes chrX_5_6395001 chrX_6395001 RAL-892 2540 chrX 6470605 6470643 chrX 6470798 6470836 7 189 4.5 0.5 2.5 2.0 231 chrX 6470605 intron CG42340 - chrX 6470720 intron CG42340 - chrX 6470836 intron CG42340 - chrX_7_6470001 chrX_6470001 RAL-892 2541 chrX 6562811 6562850 chrX 6571298 6571331 Tirant 6 8485 4.0 4.5 4.2 1.2 8520 chrX 6562811 intron CG34417 + chrX 6567071 intron CG34417 + chrX 6571331 intron CG34417 + chrX_6_6565001 chrX_6565001 RAL-892 2542 chrX 6605465 6605507 chrX 6608507 6608549 Burdock 15 3042 2.0 7.5 4.8 2.6 3084 chrX 6605465 intron pigs + chrX 6607007 intron pigs + chrX 6608549 intron pigs + chrX_15_6605001 chrX_6605001 RAL-892 2543 chrX 6730950 6730997 chrX 6731348 6731395 6 392 3.5 3.5 3.5 1.3 445 chrX 6730950 intron CG3168 - chrX 6731172 intron CG3168 - chrX 6731395 intron CG3168 - chrX_6_6730001 chrX_6730001 RAL-892 2544 chrX 6737513 6737550 chrX 6737609 6737617 8 86 1.5 1.0 1.2 3.6 104 chrX 6737513 intron CG3168 - chrX 6737565 intron CG3168 - chrX 6737617 intron CG3168 - chrX_8_6735001 chrX_6735001 RAL-892 2545 chrX 6792065 6792088 chrX 6792176 6792198 6 110 2.0 2.5 2.2 1.9 133 chrX 6792065 intron C3G - chrX 6792132 intron C3G - chrX 6792198 intron C3G - chrX_6_6790001 chrX_6790001 RAL-892 2546 chrX 6859548 6859558 chrX 6859981 6859991 6 431 5.5 3.0 4.2 1.2 443 chrX 6859548 intron CG14434 - chrX 6859770 intron CG14434 - chrX 6859991 intron CG14434 - chrX_6_6855001 chrX_6855001 RAL-892 2547 chrX 6865775 6865796 chrX 6865876 6865900 4 99 5.0 5.5 5.2 0.6 125 chrX 6865775 intron CG14434 - chrX 6865838 intron CG14434 - chrX 6865900 intron CG14434 - chrX_4_6865001 chrX_6865001 RAL-892 2548 chrX 6897588 6897711 chrX 6897686 6897841 11 123 0.0 0.0 0.0 11.0 253 chrX 6897588 intergenic not near genes chrX 6897714 intergenic not near genes chrX 6897841 intergenic not near genes chrX_11_6895001 chrX_6895001 RAL-892 2549 chrX 6987162 6987191 chrX 6987269 6987298 10 105 2.5 5.5 4.0 2.0 136 chrX 6987162 intron,3` UTR ogre -,bou + chrX 6987230 intron ogre - chrX 6987298 intron ogre - chrX_10_6985001 chrX_6985001 RAL-892 2550 chrX 6988515 6988524 chrX 6988620 6988629 5 105 10.0 4.0 7.0 0.6 114 chrX 6988515 intron ogre - chrX 6988572 intron ogre - chrX 6988629 intron ogre - chrX_5_6985001 chrX_6985001 RAL-892 2551 chrX 6989485 6989523 chrX 6989592 6989630 10 107 4.0 4.0 4.0 2.0 145 chrX 6989485 intron ogre - chrX 6989558 intron ogre - chrX 6989630 intron ogre - chrX_10_6985001 chrX_6985001 RAL-892 2552 chrX 7023582 7023630 chrX 7030992 7031000 Tabor 9 7405 5.0 5.5 5.2 1.5 7418 chrX 7023582 intron CG12541 - chrX 7027291 intron CG12541 - chrX 7031000 intron CG12541 - chrX_9_7025001 chrX_7025001 RAL-892 2553 chrX 7125241 7125267 chrX 7134420 7134446 roo 7 9179 0.0 5.5 2.8 1.8 9205 chrX 7125241 intergenic not near genes chrX 7129844 intergenic not near genes chrX 7134446 intergenic not near genes chrX_7_7125001 chrX_7125001 RAL-892 2554 chrX 7436767 7436793 chrX 7436988 7437002 4 214 2.5 3.0 2.8 1.1 235 chrX 7436767 intergenic not near genes chrX 7436884 intergenic not near genes chrX 7437002 intergenic not near genes chrX_4_7435001 chrX_7435001 RAL-892 2555 chrX 7702885 7702927 chrX 7703343 7703381 jockey 16 457 5.5 2.5 4.0 3.2 496 chrX 7702885 intron CHES-1-like - chrX 7703133 intron CHES-1-like - chrX 7703381 intron CHES-1-like - chrX_16_7700001 chrX_7700001 RAL-892 2556 chrX 7720565 7720583 chrX 7720667 7720685 4 102 0.5 2.0 1.2 1.8 120 chrX 7720565 intergenic not near genes chrX 7720625 intergenic not near genes chrX 7720685 intergenic not near genes chrX_4_7720001 chrX_7720001 RAL-892 2557 chrX 7793226 7793238 chrX 7793325 7793337 5 97 5.0 3.0 4.0 1.0 111 chrX 7793226 intergenic not near genes chrX 7793282 intergenic not near genes chrX 7793337 intergenic not near genes chrX_5_7790001 chrX_7790001 RAL-892 2558 chrX 7793239 7793267 chrX 7793321 7793366 10 95 2.5 3.0 2.8 2.6 127 chrX 7793239 intergenic not near genes chrX 7793302 intergenic not near genes chrX 7793366 intergenic not near genes chrX_10_7790001 chrX_7790001 RAL-892 2559 chrX 7832415 7832464 chrX 7832524 7832573 18 108 2.0 3.5 2.8 4.7 158 chrX 7832415 intron CG1402 + chrX 7832494 intron CG1402 + chrX 7832573 intron CG1402 + chrX_18_7830001 chrX_7830001 RAL-892 2560 chrX 7910482 7910529 chrX 7910579 7910627 10 97 3.0 3.0 3.0 2.5 145 chrX 7910482 intron CG1444 + chrX 7910554 intron CG1444 + chrX 7910627 intron CG1444 + chrX_10_7910001 chrX_7910001 RAL-892 2561 chrX 7960862 7961062 chrX 7960968 7961138 21 110 3.5 4.0 3.8 4.4 276 chrX 7960862 intron,5` UTR sws -,CR45620 + chrX 7961000 intron sws - chrX 7961138 intron sws - chrX_21_7960001 chrX_7960001 RAL-892 2562 chrX 8063718 8063765 chrX 8063837 8063875 7 112 1.5 2.5 2.0 2.3 157 chrX 8063718 intron mys + chrX 8063796 intron mys + chrX 8063875 5` UTR mys + chrX_7_8060001 chrX_8060001 RAL-892 2563 chrX 8066580 8066602 chrX 8066689 8066711 9 109 0.0 6.0 3.0 2.2 131 chrX 8066580 intron mys + chrX 8066646 intron mys + chrX 8066711 intron mys + chrX_9_8065001 chrX_8065001 RAL-892 2564 chrX 8085552 8085602 chrX 8085658 8085708 14 106 4.0 5.5 4.8 2.4 156 chrX 8085552 intron,5` UTR CG2256 -,CR45535 + chrX 8085630 intron,5` UTR CG2256 -,CR45535 + chrX 8085708 intron,5` UTR CG2256 -,CR45535 + chrX_14_8085001 chrX_8085001 RAL-892 2565 chrX 8092273 8092322 chrX 8092378 8092427 17 105 1.5 4.0 2.8 4.5 154 chrX 8092273 intron Ubc-E2H - chrX 8092350 intron Ubc-E2H - chrX 8092427 intron Ubc-E2H - chrX_17_8090001 chrX_8090001 RAL-892 2566 chrX 8138720 8138767 chrX 8138985 8139032 14 265 2.5 2.5 2.5 4.0 312 chrX 8138720 3` UTR Smox - chrX 8138876 3` UTR Smox - chrX 8139032 3` UTR Smox - chrX_14_8135001 chrX_8135001 RAL-892 2567 chrX 8304159 8304209 chrX 8304267 8304317 4 108 0.5 2.5 1.5 1.6 158 chrX 8304159 intron nAChRalpha3 - chrX 8304238 intron nAChRalpha3 - chrX 8304317 intron nAChRalpha3 - chrX_4_8300001 chrX_8300001 RAL-892 2568 chrX 8708690 8708736 chrX 8708853 8708899 22 163 37.5 20.5 29.0 0.7 209 chrX 8708690 intergenic not near genes chrX 8708794 intergenic not near genes chrX 8708899 intergenic not near genes chrX_22_8705001 chrX_8705001 RAL-892 2569 chrX 8727380 8727418 chrX 8727477 8727515 7 97 2.0 2.0 2.0 2.3 135 chrX 8727380 intergenic not near genes chrX 8727448 intergenic not near genes chrX 8727515 intergenic not near genes chrX_7_8725001 chrX_8725001 RAL-892 2570 chrX 8743254 8743263 chrX 8743352 8743361 4 98 0.5 3.5 2.0 1.3 107 chrX 8743254 intergenic not near genes chrX 8743308 intergenic not near genes chrX 8743361 intergenic not near genes chrX_4_8740001 chrX_8740001 RAL-892 2571 chrX 8748017 8748026 chrX 8748102 8748128 5 90 6.5 3.5 5.0 0.8 111 chrX 8748017 intergenic not near genes chrX 8748072 intergenic not near genes chrX 8748128 intergenic not near genes chrX_5_8745001 chrX_8745001 RAL-892 2572 chrX 8772222 8772245 chrX 8772327 8772343 7 106 4.0 1.5 2.8 1.8 121 chrX 8772222 intron Lim1 - chrX 8772282 intron Lim1 - chrX 8772343 intron Lim1 - chrX_7_8770001 chrX_8770001 RAL-892 2573 chrX 8860773 8860801 chrX 8860877 8860905 9 104 0.0 6.0 3.0 2.2 132 chrX 8860773 intron CG12075 + chrX 8860839 intron CG12075 + chrX 8860905 intron CG12075 + chrX_9_8860001 chrX_8860001 RAL-892 2574 chrX 8885649 8885701 chrX 8885769 8885815 11 118 1.5 4.5 3.0 2.8 166 chrX 8885649 intron Moe - chrX 8885732 intron Moe - chrX 8885815 intron Moe - chrX_11_8885001 chrX_8885001 RAL-892 2575 chrX 8888618 8888662 chrX 8888715 8888759 11 97 2.5 1.5 2.0 3.7 141 chrX 8888618 intron Moe - chrX 8888688 intron Moe - chrX 8888759 intron Moe - chrX_11_8885001 chrX_8885001 RAL-892 2576 chrX 8922329 8922362 chrX 8922761 8922804 jockey 11 444 1.5 2.5 2.0 3.7 475 chrX 8922329 intron rdgA + chrX 8922566 intron rdgA + chrX 8922804 intron rdgA + chrX_11_8920001 chrX_8920001 RAL-892 2577 chrX 8948742 8948782 chrX 8956272 8956312 roo 11 7530 3.0 1.0 2.0 3.7 7570 chrX 8948742 intron rdgA + chrX 8952527 intron rdgA + chrX 8956312 intron rdgA + chrX_11_8950001 chrX_8950001 RAL-892 2578 chrX 9218060 9218083 chrX 9218171 9218194 8 110 6.5 0.0 3.2 1.9 134 chrX 9218060 3` UTR t - chrX 9218127 3` UTR t - chrX 9218194 3` UTR t - chrX_8_9215001 chrX_9215001 RAL-892 2579 chrX 9398370 9398407 chrX 9398783 9398785 4 407 3.5 2.5 3.0 1.0 415 chrX 9398370 intron mgl - chrX 9398578 intron mgl - chrX 9398785 intron mgl - chrX_4_9395001 chrX_9395001 RAL-892 2580 chrX 9439412 9439455 chrX 9439509 9439549 12 92 4.0 3.5 3.8 2.5 137 chrX 9439412 intron mgl - chrX 9439480 intron mgl - chrX 9439549 intron mgl - chrX_12_9435001 chrX_9435001 RAL-892 2581 chrX 9508118 9508155 chrX 9509656 9509693 jockey 10 1536 5.5 2.5 4.0 2.0 1575 chrX 9508118 intron CG32700 - chrX 9508906 intron CG32700 - chrX 9509693 intron CG32700 - chrX_10_9505001 chrX_9505001 RAL-892 2582 chrX 9575782 9575820 chrX 9576116 9576164 mdg3 5 338 2.5 4.5 3.5 1.1 382 chrX 9575782 intron,exon CG32699 -,CG42395 - chrX 9575973 intron,intron CG32699 -,CG42395 - chrX 9576164 intron,5` UTR CG32699 -,CG42395 - chrX_5_9575001 chrX_9575001 RAL-892 2583 chrX 9577195 9577241 chrX 9577923 9577969 10 718 3.5 6.5 5.0 1.7 774 chrX 9577195 intron CG32699 - chrX 9577582 intron CG32699 - chrX 9577969 intron CG32699 - chrX_10_9575001 chrX_9575001 RAL-892 2584 chrX 9758035 9758078 chrX 9758140 9758183 4 105 2.0 0.0 1.0 2.0 148 chrX 9758035 intergenic not near genes chrX 9758109 intergenic not near genes chrX 9758183 intergenic not near genes chrX_4_9755001 chrX_9755001 RAL-892 2585 chrX 9906193 9906237 chrX 9907390 9907434 8 1197 3.5 1.5 2.5 2.3 1241 chrX 9906193 intergenic not near genes chrX 9906814 intergenic not near genes chrX 9907434 intergenic not near genes chrX_8_9905001 chrX_9905001 RAL-892 2586 chrX 9923374 9923420 chrX 9923485 9923529 8 110 3.0 2.5 2.8 2.1 155 chrX 9923374 intergenic not near genes chrX 9923452 intergenic not near genes chrX 9923529 intergenic not near genes chrX_8_9920001 chrX_9920001 RAL-892 2587 chrX 10138199 10138242 chrX 10145723 10145766 412 11 7523 3.5 5.5 4.5 2.0 7567 chrX 10138199 intron,intron RhoU +,CR44894 - chrX 10141982 intron,intron RhoU +,CR44894 - chrX 10145766 intron,intron RhoU +,CR44894 - chrX_11_10140001 chrX_10140001 RAL-892 2588 chrX 10151904 10151938 chrX 10152001 10152035 8 87 5.5 4.0 4.8 1.4 131 chrX 10151904 intron CR44894 - chrX 10151970 intron CR44894 - chrX 10152035 intron CR44894 - chrX_8_10150001 chrX_10150001 RAL-892 2589 chrX 10154267 10154310 chrX 10154363 10154405 6 96 1.5 1.5 1.5 2.4 138 chrX 10154267 intron,intron CR44894 -,CG12645 + chrX 10154336 intron,intron CR44894 -,CG12645 + chrX 10154405 intron,exon CR44894 -,CG12645 + chrX_6_10150001 chrX_10150001 RAL-892 2590 chrX 10216825 10216849 chrX 10216925 10216950 6 97 7.5 9.5 8.5 0.6 125 chrX 10216825 3` UTR l(1)G0230 + chrX 10216888 3` UTR l(1)G0230 + chrX 10216950 3` UTR l(1)G0230 + chrX_6_10215001 chrX_10215001 RAL-892 2591 chrX 10248609 10248648 chrX 10248706 10248745 14 97 5.5 3.0 4.2 2.7 136 chrX 10248609 intron Hk - chrX 10248677 intron Hk - chrX 10248745 intron Hk - chrX_14_10245001 chrX_10245001 RAL-892 2592 chrX 10267296 10267332 chrX 10276466 10276500 roo 9 9170 0.0 2.5 1.2 4.1 9204 chrX 10267296 3` UTR alpha-Man-I - chrX 10271898 intron alpha-Man-I - chrX 10276500 3` UTR alpha-Man-I - chrX_9_10270001 chrX_10270001 RAL-892 2593 chrX 10317541 10317580 chrX 10317639 10317678 7 98 0.0 2.0 1.0 3.5 137 chrX 10317541 intron alpha-Man-I - chrX 10317610 intron alpha-Man-I - chrX 10317678 intron alpha-Man-I - chrX_7_10315001 chrX_10315001 RAL-892 2594 chrX 10348780 10348823 chrX 10356365 10356408 springer 10 7584 5.0 3.0 4.0 2.0 7628 chrX 10348780 intergenic snoRNA:U3:9B + chrX 10352594 intergenic not near genes chrX 10356408 intergenic l(1)G0289 - chrX_10_10350001 chrX_10350001 RAL-892 2595 chrX 10446665 10446712 chrX 10446767 10446814 15 101 2.5 2.5 2.5 4.3 149 chrX 10446665 intron CG32683 - chrX 10446740 intron CG32683 - chrX 10446814 intron CG32683 - chrX_15_10445001 chrX_10445001 RAL-892 2596 chrX 10453056 10453101 chrX 10453267 10453293 5 206 3.0 4.0 3.5 1.1 237 chrX 10453056 intron CG32683 - chrX 10453174 intron CG32683 - chrX 10453293 intron CG32683 - chrX_5_10450001 chrX_10450001 RAL-892 2597 chrX 10506489 10506526 chrX 10506593 10506633 6 95 1.0 2.0 1.5 2.4 144 chrX 10506489 intron spri - chrX 10506561 intron spri - chrX 10506633 intron spri - chrX_6_10505001 chrX_10505001 RAL-892 2598 chrX 10550312 10550367 chrX 10550410 10550465 14 98 3.5 2.0 2.8 3.7 153 chrX 10550312 intron spri - chrX 10550388 intron spri - chrX 10550465 intron spri - chrX_14_10550001 chrX_10550001 RAL-892 2599 chrX 10550848 10550886 chrX 10552331 10552373 hobo 9 1483 1.5 3.0 2.2 2.8 1525 chrX 10550848 intron spri - chrX 10551610 intron spri - chrX 10552373 intron spri - chrX_9_10550001 chrX_10550001 RAL-892 2600 chrX 10644664 10644679 chrX 10644966 10644981 4 302 1.5 9.0 5.2 0.6 317 chrX 10644664 intron X11Lbeta + chrX 10644822 intron X11Lbeta + chrX 10644981 intron X11Lbeta + chrX_4_10640001 chrX_10640001 RAL-892 2601 chrX 10675259 10675310 chrX 10675642 10675693 18 382 2.5 3.5 3.0 4.5 434 chrX 10675259 intron X11Lbeta + chrX 10675476 intron X11Lbeta + chrX 10675693 intron X11Lbeta + chrX_18_10675001 chrX_10675001 RAL-892 2602 chrX 10686033 10686083 chrX 10691190 10691205 roo 15 5155 1.5 1.5 1.5 6.0 5172 chrX 10686033 intron X11Lbeta + chrX 10688619 intron X11Lbeta + chrX 10691205 intron X11Lbeta + chrX_15_10685001 chrX_10685001 RAL-892 2603 chrX 10772687 10772696 chrX 10772760 10772799 Tirant 5 91 1.5 1.5 1.5 2.0 112 chrX 10772687 intron CG15211 + chrX 10772743 intron CG15211 + chrX 10772799 intron CG15211 + chrX_5_10770001 chrX_10770001 RAL-892 2604 chrX 10803016 10803048 chrX 10803121 10803153 8 105 5.5 4.5 5.0 1.3 137 chrX 10803016 intron Imp - chrX 10803084 intron Imp - chrX 10803153 intron Imp - chrX_8_10800001 chrX_10800001 RAL-892 2605 chrX 10933901 10933943 chrX 10934009 10934051 7 108 0.0 3.0 1.5 2.8 150 chrX 10933901 intron Myo10A + chrX 10933976 intron Myo10A + chrX 10934051 intron Myo10A + chrX_7_10930001 chrX_10930001 RAL-892 2606 chrX 10960210 10960234 chrX 10960344 10960368 6 134 5.5 3.5 4.5 1.1 158 chrX 10960210 intron Myo10A + chrX 10960289 intron Myo10A + chrX 10960368 intron Myo10A + chrX_6_10960001 chrX_10960001 RAL-892 2607 chrX 11095983 11096017 chrX 11103105 11103139 HMS-Beagle 11 7122 4.0 6.5 5.2 1.8 7156 chrX 11095983 intergenic not near genes chrX 11099561 intergenic not near genes chrX 11103139 intron CG42249 + chrX_11_11095001 chrX_11095001 RAL-892 2608 chrX 11109417 11109418 chrX 12946234 12946235 11 1836817 17.5 15.5 16.5 0.6 1836818 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946235 3` UTR fne + chrX_11_12025001 chrX_12025001 RAL-892 2609 chrX 11184239 11184277 chrX 11189329 11189373 flea 6 5095 2.0 3.0 2.5 1.7 5134 chrX 11184239 intergenic not near genes chrX 11186806 intergenic not near genes chrX 11189373 intergenic not near genes chrX_6_11185001 chrX_11185001 RAL-892 2610 chrX 11214984 11214993 chrX 11215367 11215376 6 383 3.0 2.0 2.5 1.7 392 chrX 11214984 intergenic not near genes chrX 11215180 intergenic not near genes chrX 11215376 intergenic not near genes chrX_6_11215001 chrX_11215001 RAL-892 2611 chrX 11312053 11312091 chrX 11319414 11319432 Stalker2 6 7364 1.5 2.0 1.8 2.1 7379 chrX 11312053 intergenic not near genes chrX 11315742 intergenic not near genes chrX 11319432 intergenic not near genes chrX_6_11315001 chrX_11315001 RAL-892 2612 chrX 11379746 11379790 chrX 11379911 11379955 9 165 4.5 3.0 3.8 1.9 209 chrX 11379746 intron dlg1 + chrX 11379850 intron dlg1 + chrX 11379955 intron dlg1 + chrX_9_11375001 chrX_11375001 RAL-892 2613 chrX 11627817 11627867 chrX 11627928 11627976 12 111 2.0 2.5 2.2 3.8 159 chrX 11627817 intron Ptp10D + chrX 11627896 intron Ptp10D + chrX 11627976 intron Ptp10D + chrX_12_11625001 chrX_11625001 RAL-892 2614 chrX 11633398 11633445 chrX 11640472 11640519 297 19 7073 4.0 3.0 3.5 4.2 7121 chrX 11633398 intron Ptp10D + chrX 11636958 intron Ptp10D + chrX 11640519 intron Ptp10D + chrX_19_11635001 chrX_11635001 RAL-892 2615 chrX 11645103 11645119 chrX 11648293 11648309 NOF 5 3190 4.0 6.5 5.2 0.8 3206 chrX 11645103 intron Ptp10D + chrX 11646706 intron Ptp10D + chrX 11648309 intron Ptp10D + chrX_5_11645001 chrX_11645001 RAL-892 2616 chrX 11799006 11799038 chrX 11799111 11799144 7 106 2.0 4.0 3.0 1.8 138 chrX 11799006 intron CkIIbeta + chrX 11799075 intron CkIIbeta + chrX 11799144 intron CkIIbeta + chrX_7_11795001 chrX_11795001 RAL-892 2617 chrX 11804658 11804689 chrX 11804782 11804813 7 124 3.0 5.5 4.2 1.3 155 chrX 11804658 intron Hsc70-3 - chrX 11804736 intron Hsc70-3 - chrX 11804813 intron Hsc70-3 - chrX_7_11800001 chrX_11800001 RAL-892 2618 chrX 11857124 11857153 chrX 11857229 11857232 9 107 2.0 3.0 2.5 2.6 108 chrX 11857124 intron ATP7 + chrX 11857178 intron ATP7 + chrX 11857232 intron ATP7 + chrX_9_11855001 chrX_11855001 RAL-892 2619 chrX 12020800 12020838 chrX 12020902 12020940 4 102 5.0 0.0 2.5 1.1 140 chrX 12020800 intergenic CG15735 +,Tango4 + chrX 12020870 intergenic CG15735 +,Tango4 + chrX 12020940 intergenic Tango4 +,CG15735 + chrX_4_12020001 chrX_12020001 RAL-892 2620 chrX 12246944 12246990 chrX 12247060 12247106 7 116 2.5 2.5 2.5 2.0 162 chrX 12246944 intron Ten-a + chrX 12247025 intron Ten-a + chrX 12247106 intron Ten-a + chrX_7_12245001 chrX_12245001 RAL-892 2621 chrX 12301959 12301979 chrX 12303274 12303279 X-element 4 1312 1.5 3.5 2.5 1.1 1320 chrX 12301959 intron Ten-a + chrX 12302619 intron Ten-a + chrX 12303279 intron Ten-a + chrX_4_12300001 chrX_12300001 RAL-892 2622 chrX 12381841 12381896 chrX 12385774 12385818 flea 5 3928 0.0 5.0 2.5 1.4 3977 chrX 12381841 intergenic not near genes chrX 12383830 intergenic not near genes chrX 12385818 intergenic not near genes chrX_5_12380001 chrX_12380001 RAL-892 2623 chrX 12421215 12421233 chrX 12421320 12421338 7 105 4.0 5.5 4.8 1.2 123 chrX 12421215 intergenic not near genes chrX 12421276 intergenic not near genes chrX 12421338 intergenic not near genes chrX_7_12420001 chrX_12420001 RAL-892 2624 chrX 12465456 12465481 chrX 12465552 12465577 4 96 2.5 1.0 1.8 1.4 121 chrX 12465456 exon CG42258 + chrX 12465516 intron CG42258 + chrX 12465577 intron CG42258 + chrX_4_12465001 chrX_12465001 RAL-892 2625 chrX 12528843 12528869 chrX 12528939 12528965 4 96 3.5 0.5 2.0 1.3 122 chrX 12528843 intron CG43921 - chrX 12528904 intron CG43921 - chrX 12528965 intron CG43921 - chrX_4_12525001 chrX_12525001 RAL-892 2626 chrX 12785407 12785442 chrX 12785504 12785539 11 97 5.0 2.5 3.8 2.3 132 chrX 12785407 intergenic Pde9 -,CG32647 - chrX 12785473 intergenic Pde9 - chrX 12785539 intergenic Pde9 - chrX_11_12785001 chrX_12785001 RAL-892 2627 chrX 12930576 12930591 chrX 12937712 12937727 HMS-Beagle 4 7136 8.0 7.5 7.8 0.5 7151 chrX 12930576 intron fne + chrX 12934152 intron fne + chrX 12937727 intron fne + chrX_4_12930001 chrX_12930001 RAL-892 2628 chrX 11109417 11109417 chrX 12946233 12946233 4 1836816 17.5 15.5 16.5 0.2 1836816 chrX 11109417 intron Hsp60 + chrX 12027825 exon Usp7 - chrX 12946233 3` UTR fne + chrX_4_12025001 chrX_12025001 RAL-892 2629 chrX 11109417 11109417 chrX 12946234 12946234 6 1836817 17.5 15.5 16.5 0.3 1836817 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946234 3` UTR fne + chrX_6_12025001 chrX_12025001 RAL-892 2630 chrX 12946235 12946235 chrX 18572526 18572526 4 5626291 17.0 14.5 15.8 0.2 5626291 chrX 12946235 3` UTR fne + chrX 15759380 intron Graf - chrX 18572526 intergenic not near genes chrX_4_15755001 chrX_15755001 RAL-892 2631 chrX 13106258 13106276 chrX 13106355 13106381 5 103 4.0 5.0 4.5 0.9 123 chrX 13106258 intron CG43313 - chrX 13106320 intron CG43313 - chrX 13106381 intron CG43313 - chrX_5_13105001 chrX_13105001 RAL-892 2632 chrX 13146577 13146627 chrX 13146685 13146735 16 108 3.0 3.5 3.2 3.8 158 chrX 13146577 intron CG32645 + chrX 13146656 intron CG32645 + chrX 13146735 intron CG32645 + chrX_16_13145001 chrX_13145001 RAL-892 2633 chrX 13168555 13168571 chrX 13168676 13168692 8 120 1.0 2.5 1.8 2.9 137 chrX 13168555 intron CG34411 - chrX 13168624 intron CG34411 - chrX 13168692 intron CG34411 - chrX_8_13165001 chrX_13165001 RAL-892 2634 chrX 13172328 13172382 chrX 13172424 13172478 12 95 0.5 2.5 1.5 4.8 150 chrX 13172328 exon CG34411 - chrX 13172403 intron CG34411 - chrX 13172478 intron CG34411 - chrX_12_13170001 chrX_13170001 RAL-892 2635 chrX 13193125 13193179 chrX 13193264 13193318 9 144 23.5 28.0 25.8 0.3 193 chrX 13193125 3` UTR CG2453 - chrX 13193222 3` UTR CG2453 - chrX 13193318 3` UTR CG2453 - chrX_9_13190001 chrX_13190001 RAL-892 2636 chrX 13238087 13238102 chrX 13238184 13238199 6 97 0.0 4.5 2.2 1.9 112 chrX 13238087 intron mew - chrX 13238143 intron mew - chrX 13238199 intron mew - chrX_6_13235001 chrX_13235001 RAL-892 2637 chrX 13262464 13262477 chrX 13262588 13262601 5 124 2.5 3.0 2.8 1.3 137 chrX 13262464 3` UTR comt + chrX 13262532 intergenic comt +,HDAC4 - chrX 13262601 intergenic HDAC4 -,comt + chrX_5_13260001 chrX_13260001 RAL-892 2638 chrX 13269187 13269221 chrX 13269283 13269317 10 96 0.0 0.0 0.0 10.0 130 chrX 13269187 intron HDAC4 - chrX 13269252 intron HDAC4 - chrX 13269317 intron HDAC4 - chrX_10_13265001 chrX_13265001 RAL-892 2639 chrX 13278154 13278177 chrX 13278256 13278280 7 103 6.0 7.5 6.8 0.9 126 chrX 13278154 intron HDAC4 - chrX 13278217 intron HDAC4 - chrX 13278280 intron HDAC4 - chrX_7_13275001 chrX_13275001 RAL-892 2640 chrX 13329304 13329319 chrX 13329418 13329433 5 114 2.0 3.0 2.5 1.4 129 chrX 13329304 intergenic IP3K2 + chrX 13329368 intergenic IP3K2 +,Jafrac1 + chrX 13329433 intergenic IP3K2 +,Jafrac1 + chrX_5_13325001 chrX_13325001 RAL-892 2641 chrX 13401473 13401508 chrX 13401845 13401880 jockey 5 372 3.0 3.0 3.0 1.2 407 chrX 13401473 intergenic CG1673 +,CG12725 - chrX 13401676 intergenic CG12725 -,CG1673 + chrX 13401880 3` UTR CG12725 - chrX_5_13400001 chrX_13400001 RAL-892 2642 chrX 13429448 13429490 chrX 13430611 13430648 jockey 11 1167 4.0 4.0 4.0 2.2 1200 chrX 13429448 intergenic not near genes chrX 13430048 intergenic not near genes chrX 13430648 intergenic not near genes chrX_11_13430001 chrX_13430001 RAL-892 2643 chrX 13463632 13463666 chrX 13469224 13469253 mdg3 12 5594 3.0 3.0 3.0 3.0 5621 chrX 13463632 intron Neto + chrX 13466442 intron Neto + chrX 13469253 intron Neto + chrX_12_13465001 chrX_13465001 RAL-892 2644 chrX 13577740 13577780 chrX 13578161 13578199 7 418 3.5 5.0 4.2 1.3 459 chrX 13577740 intron Tango13 + chrX 13577970 intron Tango13 + chrX 13578199 intron Tango13 + chrX_7_13575001 chrX_13575001 RAL-892 2645 chrX 13593201 13593228 chrX 13593301 13593328 7 100 1.5 0.0 0.8 3.9 127 chrX 13593201 3` UTR Tango13 + chrX 13593264 intergenic Tango13 +,up - chrX 13593328 intergenic Tango13 +,up - chrX_7_13590001 chrX_13590001 RAL-892 2646 chrX 13663099 13663136 chrX 13663448 13663485 8 349 3.0 1.5 2.2 2.5 386 chrX 13663099 3` UTR NFAT + chrX 13663292 3` UTR NFAT + chrX 13663485 3` UTR NFAT + chrX_8_13660001 chrX_13660001 RAL-892 2647 chrX 13734084 13734106 chrX 13734195 13734222 4 114 4.0 5.0 4.5 0.7 138 chrX 13734084 intron g - chrX 13734153 intron g - chrX 13734222 intron g - chrX_4_13730001 chrX_13730001 RAL-892 2648 chrX 13754405 13754459 chrX 13754521 13754553 5 107 3.0 5.5 4.2 1.0 148 chrX 13754405 intron Pdcd4 - chrX 13754479 intron Pdcd4 - chrX 13754553 intron Pdcd4 - chrX_5_13750001 chrX_13750001 RAL-892 2649 chrX 13789049 13789095 chrX 13789163 13789209 17 114 3.5 4.0 3.8 3.5 160 chrX 13789049 intron inaE + chrX 13789129 intron inaE + chrX 13789209 intron inaE + chrX_17_13785001 chrX_13785001 RAL-892 2650 chrX 13880026 13880052 chrX 13880632 13880658 7 606 4.5 1.0 2.8 1.8 632 chrX 13880026 intron mamo - chrX 13880342 intron mamo - chrX 13880658 intron mamo - chrX_7_13880001 chrX_13880001 RAL-892 2651 chrX 13934280 13934315 chrX 13934383 13934416 5 103 3.5 3.5 3.5 1.1 136 chrX 13934280 intron mamo - chrX 13934348 intron mamo - chrX 13934416 intron mamo - chrX_5_13930001 chrX_13930001 RAL-892 2652 chrX 13935499 13935523 chrX 13935602 13935625 7 101 2.5 7.0 4.8 1.2 126 chrX 13935499 intron mamo - chrX 13935562 intron mamo - chrX 13935625 intron mamo - chrX_7_13935001 chrX_13935001 RAL-892 2653 chrX 13937977 13937997 chrX 13941268 13941288 I-element 7 3291 2.5 1.5 2.0 2.3 3311 chrX 13937977 intron mamo - chrX 13939632 intron mamo - chrX 13941288 intron mamo - chrX_7_13935001 chrX_13935001 RAL-892 2654 chrX 13943272 13943280 chrX 13943383 13943387 6 110 0.0 5.0 2.5 1.7 115 chrX 13943272 intron mamo - chrX 13943330 intron mamo - chrX 13943387 intron mamo - chrX_6_13940001 chrX_13940001 RAL-892 2655 chrX 13943282 13943300 chrX 13943381 13943411 6 103 0.0 5.0 2.5 1.7 129 chrX 13943282 intron mamo - chrX 13943346 intron mamo - chrX 13943411 intron mamo - chrX_6_13940001 chrX_13940001 RAL-892 2656 chrX 14105005 14105051 chrX 14114176 14114217 roo 10 9164 2.5 1.5 2.0 3.3 9212 chrX 14105005 intergenic not near genes chrX 14109611 intergenic not near genes chrX 14114217 5` UTR CR44657 + chrX_10_14105001 chrX_14105001 RAL-892 2657 chrX 14131475 14131523 chrX 14131574 14131612 6 93 0.5 3.5 2.0 2.0 137 chrX 14131475 intergenic not near genes chrX 14131544 intergenic not near genes chrX 14131612 intergenic not near genes chrX_6_14130001 chrX_14130001 RAL-892 2658 chrX 14157581 14157600 chrX 14163258 14163277 297 5 5677 5.5 3.0 4.2 1.0 5696 chrX 14157581 intergenic not near genes chrX 14160429 intergenic not near genes chrX 14163277 intergenic not near genes chrX_5_14160001 chrX_14160001 RAL-892 2659 chrX 14312756 14312788 chrX 14312857 14312889 8 101 3.0 0.0 1.5 3.2 133 chrX 14312756 intergenic not near genes chrX 14312822 intergenic not near genes chrX 14312889 intergenic not near genes chrX_8_14310001 chrX_14310001 RAL-892 2660 chrX 14404996 14405016 chrX 14405094 14405114 6 98 3.0 2.0 2.5 1.7 118 chrX 14404996 intron dpr8 + chrX 14405055 intron dpr8 + chrX 14405114 intron dpr8 + chrX_6_14405001 chrX_14405001 RAL-892 2661 chrX 14416296 14416337 chrX 14421083 14421124 F-element 8 4787 3.0 5.0 4.0 1.6 4828 chrX 14416296 intron dpr8 + chrX 14418710 intron dpr8 + chrX 14421124 intron dpr8 + chrX_8_14415001 chrX_14415001 RAL-892 2662 chrX 14484968 14484995 chrX 14485077 14485104 4 109 0.0 3.5 1.8 1.4 136 chrX 14484968 intergenic not near genes chrX 14485036 intergenic not near genes chrX 14485104 intergenic not near genes chrX_4_14485001 chrX_14485001 RAL-892 2663 chrX 14531337 14531386 chrX 14531446 14531495 10 109 1.5 5.5 3.5 2.2 158 chrX 14531337 intergenic not near genes chrX 14531416 intergenic not near genes chrX 14531495 intergenic not near genes chrX_10_14530001 chrX_14530001 RAL-892 2664 chrX 14610183 14610233 chrX 14610296 14610338 12 110 3.0 2.5 2.8 3.2 155 chrX 14610183 intron NetA - chrX 14610260 intron NetA - chrX 14610338 intron NetA - chrX_12_14610001 chrX_14610001 RAL-892 2665 chrX 14636443 14636489 chrX 14641904 14641950 I-element 10 5459 3.5 2.5 3.0 2.5 5507 chrX 14636443 intron NetA - chrX 14639196 intron NetA - chrX 14641950 intron NetA - chrX_10_14635001 chrX_14635001 RAL-892 2666 chrX 14714030 14714062 chrX 14714132 14714164 6 102 2.5 2.5 2.5 1.7 134 chrX 14714030 intron NetB - chrX 14714097 intron NetB - chrX 14714164 intron NetB - chrX_6_14710001 chrX_14710001 RAL-892 2667 chrX 14767928 14767976 chrX 14768023 14768076 10 94 1.0 2.0 1.5 4.0 148 chrX 14767928 intergenic not near genes chrX 14768002 intergenic not near genes chrX 14768076 intergenic not near genes chrX_10_14765001 chrX_14765001 RAL-892 2668 chrX 14778017 14778054 chrX 14782834 14782871 Doc 11 4817 4.5 4.5 4.5 2.0 4854 chrX 14778017 intergenic CG5347 + chrX 14780444 intergenic not near genes chrX 14782871 intergenic Ag5r2 - chrX_11_14780001 chrX_14780001 RAL-892 2669 chrX 14806741 14806777 chrX 14806849 14806885 10 108 2.0 0.0 1.0 5.0 144 chrX 14806741 intron rut - chrX 14806813 intron rut - chrX 14806885 intron rut - chrX_10_14805001 chrX_14805001 RAL-892 2670 chrX 14818743 14818794 chrX 14823967 14824018 copia 8 5221 2.0 4.5 3.2 1.9 5275 chrX 14818743 intron rut - chrX 14821380 intron rut - chrX 14824018 intron rut - chrX_8_14820001 chrX_14820001 RAL-892 2671 chrX 14883588 14883618 chrX 14883684 14883714 7 96 3.0 0.0 1.5 2.8 126 chrX 14883588 intron Flo2 + chrX 14883651 intron Flo2 + chrX 14883714 intron Flo2 + chrX_7_14880001 chrX_14880001 RAL-892 2672 chrX 14888933 14888976 chrX 14889039 14889082 10 105 0.0 3.0 1.5 4.0 149 chrX 14888933 intron,intron Flo2 +,CG9514 - chrX 14889008 intron,intron Flo2 +,CG9514 - chrX 14889082 intron,intron Flo2 +,CG9514 - chrX_10_14885001 chrX_14885001 RAL-892 2673 chrX 14928206 14928240 chrX 14928302 14928329 5 96 2.5 0.0 1.2 2.3 123 chrX 14928206 intron,exon Flo2 +,CG32591 - chrX 14928268 intron,exon Flo2 +,CG32591 - chrX 14928329 intron,exon Flo2 +,CG32591 - chrX_5_14925001 chrX_14925001 RAL-892 2674 chrX 14936840 14936890 chrX 14946117 14946167 roo 12 9277 4.0 4.5 4.2 2.3 9327 chrX 14936840 intron pdgy - chrX 14941504 intron pdgy - chrX 14946167 intron pdgy - chrX_12_14940001 chrX_14940001 RAL-892 2675 chrX 14968053 14968095 chrX 14968152 14968184 6 97 0.0 4.5 2.2 1.9 131 chrX 14968053 intron eag + chrX 14968118 intron eag + chrX 14968184 intron eag + chrX_6_14965001 chrX_14965001 RAL-892 2676 chrX 14981712 14981740 chrX 14981811 14981839 5 99 2.5 2.0 2.2 1.6 127 chrX 14981712 intron eag + chrX 14981776 intron eag + chrX 14981839 intron eag + chrX_5_14980001 chrX_14980001 RAL-892 2677 chrX 15127218 15127236 chrX 15127330 15127348 6 112 6.0 8.5 7.2 0.7 130 chrX 15127218 intron drd + chrX 15127283 intron drd + chrX 15127348 intron drd + chrX_6_15125001 chrX_15125001 RAL-892 2678 chrX 15198237 15198409 chrX 15198337 15198509 6 100 6.5 6.0 6.2 0.8 272 chrX 15198237 intergenic not near genes chrX 15198373 intergenic not near genes chrX 15198509 intergenic not near genes chrX_6_15195001 chrX_15195001 RAL-892 2679 chrX 15200626 15200633 chrX 15200722 15200729 5 96 3.0 3.0 3.0 1.2 103 chrX 15200626 intergenic not near genes chrX 15200678 intergenic not near genes chrX 15200729 intergenic not near genes chrX_5_15200001 chrX_15200001 RAL-892 2680 chrX 15277617 15277668 chrX 15277722 15277773 8 104 3.5 2.0 2.8 2.1 156 chrX 15277617 intergenic not near genes chrX 15277695 intergenic not near genes chrX 15277773 intergenic not near genes chrX_8_15275001 chrX_15275001 RAL-892 2681 chrX 15409646 15409680 chrX 15409745 15409779 7 98 2.5 7.0 4.8 1.2 133 chrX 15409646 intron Cngl - chrX 15409712 intron Cngl - chrX 15409779 intron Cngl - chrX_7_15405001 chrX_15405001 RAL-892 2682 chrX 15413035 15413082 chrX 15417357 15417404 Juan 10 4320 4.0 2.5 3.2 2.4 4369 chrX 15413035 intron Cngl - chrX 15415220 intron Cngl - chrX 15417404 intron Cngl - chrX_10_15415001 chrX_15415001 RAL-892 2683 chrX 15421902 15421951 chrX 15423433 15423482 pogo 11 1531 3.0 2.5 2.8 2.9 1580 chrX 15421902 intron Cngl - chrX 15422692 intron Cngl - chrX 15423482 intron Cngl - chrX_11_15420001 chrX_15420001 RAL-892 2684 chrX 15435692 15435701 chrX 15436143 15436154 rover 5 451 0.0 7.0 3.5 1.1 462 chrX 15435692 intron Cngl - chrX 15435923 intron Cngl - chrX 15436154 intron Cngl - chrX_5_15435001 chrX_15435001 RAL-892 2685 chrX 16074124 16074164 chrX 16074480 16074520 14 356 0.0 7.5 3.8 2.9 396 chrX 16074124 intergenic not near genes chrX 16074322 intergenic Tob - chrX 16074520 intergenic Tob - chrX_14_16070001 chrX_16070001 RAL-892 2686 chrX 16100536 16100591 chrX 16100635 16100691 10 89 3.5 2.5 3.0 2.5 155 chrX 16100536 intron,intron CG42353 -,CG42354 - chrX 16100614 intron,intron CG42353 -,CG42354 - chrX 16100691 intron,intron CG42353 -,CG42354 - chrX_10_16100001 chrX_16100001 RAL-892 2687 chrX 16172884 16172912 chrX 16173010 16173040 7 127 4.0 3.5 3.8 1.5 156 chrX 16172884 intergenic not near genes chrX 16172962 intergenic not near genes chrX 16173040 intergenic not near genes chrX_7_16170001 chrX_16170001 RAL-892 2688 chrX 16222760 16222810 chrX 16231130 16231179 roo 14 8370 2.5 3.0 2.8 3.7 8419 chrX 16222760 intergenic not near genes chrX 16226970 intergenic not near genes chrX 16231179 intergenic not near genes chrX_14_16225001 chrX_16225001 RAL-892 2689 chrX 16245933 16245963 chrX 16246060 16246090 INE-1 7 127 8.5 1.0 4.8 1.2 157 chrX 16245933 intergenic not near genes chrX 16246012 intergenic not near genes chrX 16246090 intergenic not near genes chrX_7_16245001 chrX_16245001 RAL-892 2690 chrX 16295505 16295516 chrX 16295609 16295620 5 104 6.5 0.0 3.2 1.2 115 chrX 16295505 intron CG9911 - chrX 16295562 intron CG9911 - chrX 16295620 intron CG9911 - chrX_5_16295001 chrX_16295001 RAL-892 2691 chrX 16329406 16329442 chrX 16329505 16329535 4 99 0.0 1.5 0.8 2.2 129 chrX 16329406 intron CG9919 - chrX 16329470 intron CG9919 - chrX 16329535 exon CG9919 - chrX_4_16325001 chrX_16325001 RAL-892 2692 chrX 16340647 16340663 chrX 16349824 16349840 roo 8 9177 7.0 4.0 5.5 1.2 9193 chrX 16340647 intergenic Dsp1 + chrX 16345244 intergenic not near genes chrX 16349840 intergenic sl + chrX_8_16345001 chrX_16345001 RAL-892 2693 chrX 16340667 16340694 chrX 16349822 16349871 roo 10 9172 2.5 4.0 3.2 2.4 9204 chrX 16340667 intergenic Dsp1 + chrX 16345269 intergenic not near genes chrX 16349871 intergenic sl + chrX_10_16345001 chrX_16345001 RAL-892 2694 chrX 16370352 16370375 chrX 16370451 16370474 6 99 6.5 0.0 3.2 1.4 122 chrX 16370352 intron nonA + chrX 16370413 intron nonA + chrX 16370474 intron nonA + chrX_6_16370001 chrX_16370001 RAL-892 2695 chrX 16492627 16492672 chrX 16498224 16498269 mdg3 17 5597 2.0 3.5 2.8 4.5 5642 chrX 16492627 intron para - chrX 16495448 intron para - chrX 16498269 exon para - chrX_17_16495001 chrX_16495001 RAL-892 2696 chrX 16539562 16539593 chrX 16539649 16539649 4 67 1.5 2.5 2.0 1.3 87 chrX 16539562 exon CG9903 - chrX 16539606 exon CG9903 - chrX 16539649 exon CG9903 - chrX_4_16535001 chrX_16535001 RAL-892 2697 chrX 16573106 16573129 chrX 16573203 16573226 7 94 4.5 0.0 2.2 2.2 120 chrX 16573106 intron CanA-14F - chrX 16573166 intron CanA-14F - chrX 16573226 intron CanA-14F - chrX_7_16570001 chrX_16570001 RAL-892 2698 chrX 16650919 16650930 chrX 16651016 16651027 5 97 5.0 0.0 2.5 1.4 108 chrX 16650919 intergenic CG32573 +,CG42512 + chrX 16650973 intergenic CG32573 +,CG42512 + chrX 16651027 intergenic CG32573 +,CG42512 + chrX_5_16650001 chrX_16650001 RAL-892 2699 chrX 16650931 16650954 chrX 16651013 16651022 4 81 3.0 0.0 1.5 1.6 91 chrX 16650931 intergenic CG32573 +,CG42512 + chrX 16650976 intergenic CG32573 +,CG42512 + chrX 16651022 intergenic CG32573 +,CG42512 + chrX_4_16650001 chrX_16650001 RAL-892 2700 chrX 16689612 16689631 chrX 16689718 16689719 5 101 4.0 1.0 2.5 1.4 107 chrX 16689612 intron Sep4 - chrX 16689666 intron Sep4 - chrX 16689719 intron Sep4 - chrX_5_16685001 chrX_16685001 RAL-892 2701 chrX 16689632 16689656 chrX 16689717 16689762 9 91 2.0 1.0 1.5 3.6 130 chrX 16689632 intron Sep4 - chrX 16689697 intron Sep4 - chrX 16689762 intron Sep4 - chrX_9_16685001 chrX_16685001 RAL-892 2702 chrX 16870059 16870097 chrX 16870161 16870200 7 103 1.5 3.0 2.2 2.2 141 chrX 16870059 intron CG13003 - chrX 16870130 intron CG13003 - chrX 16870200 intron CG13003 - chrX_7_16870001 chrX_16870001 RAL-892 2703 chrX 16956916 16956924 chrX 16957024 16957032 4 108 4.5 1.0 2.8 1.1 116 chrX 16956916 3` UTR CG9086 - chrX 16956974 3` UTR CG9086 - chrX 16957032 3` UTR CG9086 - chrX_4_16955001 chrX_16955001 RAL-892 2704 chrX 16983076 16983077 chrX 19404963 19404965 4 2421887 16.0 6.5 11.2 0.3 2421889 chrX 16983076 intron CG45002 - chrX 18194020 intron Frq2 + chrX 19404965 intron kek5 + chrX_4_18190001 chrX_18190001 RAL-892 2705 chrX 17011976 17011998 chrX 17012068 17012101 4 92 2.5 3.5 3.0 1.0 125 chrX 17011976 intron CG45002 - chrX 17012038 intron CG45002 - chrX 17012101 intron CG45002 - chrX_4_17010001 chrX_17010001 RAL-892 2706 chrX 17057930 17057965 chrX 17058176 17058226 pogo 7 259 2.5 1.5 2.0 2.3 296 chrX 17057930 intron CG45002 - chrX 17058078 intron CG45002 - chrX 17058226 intron CG45002 - chrX_7_17055001 chrX_17055001 RAL-892 2707 chrX 17122651 17122669 chrX 17122735 17122780 5 99 1.5 1.5 1.5 2.0 129 chrX 17122651 intron CG5004 + chrX 17122716 intron CG5004 + chrX 17122780 intron CG5004 + chrX_5_17120001 chrX_17120001 RAL-892 2708 chrX 17161960 17161963 chrX 17162056 17162059 4 96 3.5 2.0 2.8 1.1 99 chrX 17161960 intron baz + chrX 17162010 intron baz + chrX 17162059 intron baz + chrX_4_17160001 chrX_17160001 RAL-892 2709 chrX 17195192 17195237 chrX 17200296 17200335 flea 10 5101 7.5 3.5 5.5 1.5 5143 chrX 17195192 3` UTR baz + chrX 17197764 3` UTR baz + chrX 17200335 3` UTR baz + chrX_10_17195001 chrX_17195001 RAL-892 2710 chrX 17205844 17205859 chrX 17205954 17205969 4 110 3.0 5.0 4.0 0.8 125 chrX 17205844 intergenic not near genes chrX 17205906 intergenic CG32564 + chrX 17205969 intergenic CG32564 + chrX_4_17205001 chrX_17205001 RAL-892 2711 chrX 17237511 17237520 chrX 17237615 17237624 5 104 6.5 3.0 4.8 0.9 113 chrX 17237511 intron f + chrX 17237568 intron f + chrX 17237624 intron f + chrX_5_17235001 chrX_17235001 RAL-892 2712 chrX 17352580 17352622 chrX 17352692 17352745 7 121 0.0 2.0 1.0 3.5 165 chrX 17352580 intergenic not near genes chrX 17352662 intergenic not near genes chrX 17352745 intergenic not near genes chrX_7_17350001 chrX_17350001 RAL-892 2713 chrX 17355518 17355523 chrX 17355636 17355641 5 118 0.0 1.5 0.8 2.8 123 chrX 17355518 intergenic not near genes chrX 17355580 intergenic not near genes chrX 17355641 intergenic not near genes chrX_5_17355001 chrX_17355001 RAL-892 2714 chrX 17362471 17362505 chrX 17362583 17362616 4 110 2.5 1.5 2.0 1.3 145 chrX 17362471 intergenic not near genes chrX 17362544 intergenic not near genes chrX 17362616 intergenic not near genes chrX_4_17360001 chrX_17360001 RAL-892 2715 chrX 17435734 17435783 chrX 17435830 17435879 10 96 3.5 3.5 3.5 2.2 145 chrX 17435734 intron CG12994 - chrX 17435806 intron CG12994 - chrX 17435879 intron CG12994 - chrX_10_17435001 chrX_17435001 RAL-892 2716 chrX 17502329 17502372 chrX 17502429 17502472 8 99 5.0 2.5 3.8 1.7 143 chrX 17502329 intron CG43658 - chrX 17502400 intron CG43658 - chrX 17502472 intron CG43658 - chrX_8_17500001 chrX_17500001 RAL-892 2717 chrX 17546951 17547004 chrX 17547104 17547157 6 153 1.0 2.5 1.8 2.1 206 chrX 17546951 intron CG43658 - chrX 17547054 intron CG43658 - chrX 17547157 intron CG43658 - chrX_6_17545001 chrX_17545001 RAL-892 2718 chrX 17708813 17708854 chrX 17708909 17708953 5 97 1.5 4.5 3.0 1.2 140 chrX 17708813 intron CG8173 - chrX 17708883 intron CG8173 - chrX 17708953 intron CG8173 - chrX_5_17705001 chrX_17705001 RAL-892 2719 chrX 17771285 17771328 chrX 17771379 17771409 5 93 3.5 5.5 4.5 0.9 124 chrX 17771285 intron unc-4 + chrX 17771347 intron unc-4 + chrX 17771409 intron unc-4 + chrX_5_17770001 chrX_17770001 RAL-892 2720 chrX 17792953 17792980 chrX 17796271 17796297 flea 5 3316 2.0 2.0 2.0 1.7 3344 chrX 17792953 intron OdsH + chrX 17794625 intron OdsH + chrX 17796297 intron OdsH + chrX_5_17790001 chrX_17790001 RAL-892 2721 chrX 17839469 17839510 chrX 17839938 17839979 13 466 2.5 4.5 3.5 2.9 510 chrX 17839469 intron CG6398 + chrX 17839724 intron CG6398 + chrX 17839979 intron CG6398 + chrX_13_17835001 chrX_17835001 RAL-892 2722 chrX 17911837 17911875 chrX 17911945 17911983 11 107 0.0 2.5 1.2 5.0 146 chrX 17911837 intron CG6847 + chrX 17911910 intron CG6847 + chrX 17911983 intron CG6847 + chrX_11_17910001 chrX_17910001 RAL-892 2723 chrX 18020805 18020847 chrX 18020912 18020954 14 107 4.0 6.5 5.2 2.3 149 chrX 18020805 intron Sh - chrX 18020880 intron Sh - chrX 18020954 intron Sh - chrX_14_18020001 chrX_18020001 RAL-892 2724 chrX 18029179 18029191 chrX 18029280 18029292 4 101 0.5 0.0 0.2 3.3 113 chrX 18029179 intron Sh - chrX 18029236 intron Sh - chrX 18029292 intron Sh - chrX_4_18025001 chrX_18025001 RAL-892 2725 chrX 18040417 18040445 chrX 18040525 18040553 5 108 1.5 3.0 2.2 1.6 136 chrX 18040417 intron Sh - chrX 18040485 intron Sh - chrX 18040553 intron Sh - chrX_5_18040001 chrX_18040001 RAL-892 2726 chrX 18141067 18141096 chrX 18141163 18141192 7 96 2.5 4.0 3.2 1.7 125 chrX 18141067 intergenic not near genes chrX 18141130 intergenic not near genes chrX 18141192 intergenic not near genes chrX_7_18140001 chrX_18140001 RAL-892 2727 chrX 18189077 18189103 chrX 18189247 18189279 4 172 1.5 4.5 3.0 1.0 202 chrX 18189077 intron Frq2 + chrX 18189178 intron Frq2 + chrX 18189279 intron Frq2 + chrX_4_18185001 chrX_18185001 RAL-892 2728 chrX 18194048 18194099 chrX 18194603 18194654 BS 18 555 3.0 3.5 3.2 4.3 606 chrX 18194048 intron Frq2 + chrX 18194351 intron Frq2 + chrX 18194654 intron Frq2 + chrX_18_18190001 chrX_18190001 RAL-892 2729 chrX 18218046 18218067 chrX 18218183 18218203 10 137 4.0 5.0 4.5 1.8 157 chrX 18218046 intron CG33639 - chrX 18218124 intron CG33639 - chrX 18218203 intron CG33639 - chrX_10_18215001 chrX_18215001 RAL-892 2730 chrX 18320467 18320491 chrX 18320619 18320643 7 152 2.0 3.0 2.5 2.0 176 chrX 18320467 intron CG6023 - chrX 18320555 intron CG6023 - chrX 18320643 intron CG6023 - chrX_7_18320001 chrX_18320001 RAL-892 2731 chrX 18337400 18337450 chrX 18337520 18337570 8 120 4.0 2.5 3.2 1.9 170 chrX 18337400 intron CG6123 - chrX 18337485 intron CG6123 - chrX 18337570 intron CG6123 - chrX_8_18335001 chrX_18335001 RAL-892 2732 chrX 18429478 18429520 chrX 18434809 18434851 Transpac 12 5330 2.0 10.5 6.2 1.7 5373 chrX 18429478 intergenic not near genes chrX 18432164 intergenic not near genes chrX 18434851 intergenic not near genes chrX_12_18430001 chrX_18430001 RAL-892 2733 chrX 18529375 18529395 chrX 18529471 18529491 5 96 5.0 2.5 3.8 1.0 116 chrX 18529375 intron,3` UTR Bx +,CG15047 + chrX 18529433 intron,3` UTR Bx +,CG15047 + chrX 18529491 intron,3` UTR Bx +,CG15047 + chrX_5_18525001 chrX_18525001 RAL-892 2734 chrX 12946235 12946235 chrX 18572525 18572525 8 5626290 17.0 14.0 15.5 0.5 5626290 chrX 12946235 3` UTR fne + chrX 15759380 intron Graf - chrX 18572525 intergenic not near genes chrX_8_15755001 chrX_15755001 RAL-892 2735 chrX 18645005 18645045 chrX 18645112 18645162 24 117 4.5 3.5 4.0 4.8 157 chrX 18645005 intron Rip11 - chrX 18645084 intron Rip11 - chrX 18645162 intron Rip11 - chrX_24_18645001 chrX_18645001 RAL-892 2736 chrX 18671200 18671236 chrX 18671302 18671338 7 102 3.0 2.5 2.8 1.8 138 chrX 18671200 intergenic not near genes chrX 18671269 intergenic not near genes chrX 18671338 intergenic not near genes chrX_7_18670001 chrX_18670001 RAL-892 2737 chrX 18698827 18698873 chrX 18698964 18699010 8 137 4.0 4.5 4.2 1.5 183 chrX 18698827 intergenic not near genes chrX 18698918 intergenic not near genes chrX 18699010 intergenic not near genes chrX_8_18695001 chrX_18695001 RAL-892 2738 chrX 18731155 18731201 chrX 18736080 18736126 6 4927 0.0 32.0 16.0 0.4 4971 chrX 18731155 intron CR45512 - chrX 18733640 5` UTR CR45513 + chrX 18736126 intergenic not near genes chrX_6_18730001 chrX_18730001 RAL-892 2739 chrX 18754316 18754341 chrX 18758003 18758028 297 4 3687 1.5 1.5 1.5 1.6 3712 chrX 18754316 intergenic not near genes chrX 18756172 intergenic not near genes chrX 18758028 intergenic not near genes chrX_4_18755001 chrX_18755001 RAL-892 2740 chrX 18832244 18832295 chrX 18832356 18832407 16 111 3.0 2.5 2.8 4.2 163 chrX 18832244 intergenic CG7101 +,Pvf1 + chrX 18832326 intergenic CG7101 +,Pvf1 + chrX 18832407 intergenic Pvf1 +,CG7101 + chrX_16_18830001 chrX_18830001 RAL-892 2741 chrX 18896889 18896930 chrX 18896985 18897023 8 88 5.0 2.0 3.5 1.8 134 chrX 18896889 intergenic CG7349 + chrX 18896956 intergenic CG7349 + chrX 18897023 intergenic CG7349 + chrX_8_18895001 chrX_18895001 RAL-892 2742 chrX 18926520 18926531 chrX 18926632 18926643 5 112 0.0 0.0 0.0 5.0 123 chrX 18926520 intergenic not near genes chrX 18926582 intergenic not near genes chrX 18926643 intergenic not near genes chrX_5_18925001 chrX_18925001 RAL-892 2743 chrX 18946168 18946183 chrX 18946275 18946290 4 107 4.0 3.0 3.5 0.9 122 chrX 18946168 intron CG43759 + chrX 18946229 intron CG43759 + chrX 18946290 intron CG43759 + chrX_4_18945001 chrX_18945001 RAL-892 2744 chrX 18947487 18947492 chrX 18947600 18947605 5 113 9.5 4.0 6.8 0.6 118 chrX 18947487 intron CG43759 + chrX 18947546 intron CG43759 + chrX 18947605 intron CG43759 + chrX_5_18945001 chrX_18945001 RAL-892 2745 chrX 18947496 18947533 chrX 18947594 18947646 11 112 4.0 4.0 4.0 2.2 150 chrX 18947496 intron CG43759 + chrX 18947571 intron CG43759 + chrX 18947646 intron CG43759 + chrX_11_18945001 chrX_18945001 RAL-892 2746 chrX 18957057 18957077 chrX 18965733 18965753 roo 5 8676 2.0 0.0 1.0 2.5 8696 chrX 18957057 intron CG43759 + chrX 18961405 intron CG43759 + chrX 18965753 intron CG43759 + chrX_5_18960001 chrX_18960001 RAL-892 2747 chrX 18988282 18988551 chrX 18988459 18988660 11 140 0.0 0.0 0.0 11.0 378 chrX 18988282 intron CG43759 + chrX 18988471 intron CG43759 + chrX 18988660 intron CG43759 + chrX_11_18985001 chrX_18985001 RAL-892 2748 chrX 19020601 19020621 chrX 19020699 19020719 4 98 0.0 5.0 2.5 1.1 118 chrX 19020601 intron CG43759 + chrX 19020660 intron CG43759 + chrX 19020719 intron CG43759 + chrX_4_19020001 chrX_19020001 RAL-892 2749 chrX 19058035 19058062 chrX 19058195 19058220 4 159 4.5 3.0 3.8 0.8 185 chrX 19058035 intron CG14190 + chrX 19058128 intron CG14190 + chrX 19058220 intron CG14190 + chrX_4_19055001 chrX_19055001 RAL-892 2750 chrX 19060384 19060429 chrX 19065188 19065233 Doc 9 4804 0.5 1.5 1.0 4.5 4849 chrX 19060384 intron CG14190 + chrX 19062808 intron CG14190 + chrX 19065233 intron CG14190 + chrX_9_19060001 chrX_19060001 RAL-892 2751 chrX 19073670 19073689 chrX 19073777 19073796 6 105 6.5 2.5 4.5 1.1 126 chrX 19073670 intergenic not near genes chrX 19073733 intergenic not near genes chrX 19073796 intergenic not near genes chrX_6_19070001 chrX_19070001 RAL-892 2752 chrX 19098739 19098781 chrX 19098836 19098879 8 97 4.0 3.0 3.5 1.8 140 chrX 19098739 intergenic not near genes chrX 19098809 intergenic not near genes chrX 19098879 intergenic not near genes chrX_8_19095001 chrX_19095001 RAL-892 2753 chrX 19124436 19124462 chrX 19124543 19124571 5 108 2.5 6.0 4.2 1.0 135 chrX 19124436 intergenic CG15882 - chrX 19124504 intergenic CG15882 -,tgy - chrX 19124571 intergenic CG15882 -,tgy - chrX_5_19120001 chrX_19120001 RAL-892 2754 chrX 19136536 19136583 chrX 19143476 19143522 412 8 6934 2.0 1.0 1.5 3.2 6986 chrX 19136536 intergenic not near genes chrX 19140029 intergenic not near genes chrX 19143522 3` UTR RhoGAP18B - chrX_8_19140001 chrX_19140001 RAL-892 2755 chrX 19176191 19176239 chrX 19176295 19176343 8 104 2.5 0.5 1.5 3.2 152 chrX 19176191 3` UTR CG7556 - chrX 19176267 3` UTR CG7556 - chrX 19176343 3` UTR CG7556 - chrX_8_19175001 chrX_19175001 RAL-892 2756 chrX 19313772 19313792 chrX 19313877 19313897 4 105 0.0 3.5 1.8 1.4 125 chrX 19313772 intron out - chrX 19313834 intron out - chrX 19313897 intron out - chrX_4_19310001 chrX_19310001 RAL-892 2757 chrX 19320207 19320253 chrX 19320315 19320361 13 107 4.0 4.5 4.2 2.5 154 chrX 19320207 intron out - chrX 19320284 intron out - chrX 19320361 intron out - chrX_13_19320001 chrX_19320001 RAL-892 2758 chrX 19356977 19356994 chrX 19358438 19358455 NOF 7 1461 5.0 0.5 2.8 1.8 1478 chrX 19356977 intron kek5 + chrX 19357716 intron kek5 + chrX 19358455 intron kek5 + chrX_7_19355001 chrX_19355001 RAL-892 2759 chrX 19380136 19380176 chrX 19380397 19380437 pogo 10 260 3.0 5.5 4.2 1.9 301 chrX 19380136 intron kek5 + chrX 19380286 intron kek5 + chrX 19380437 intron kek5 + chrX_10_19380001 chrX_19380001 RAL-892 2760 chrX 19445911 19445966 chrX 19446081 19446126 17 166 4.5 1.5 3.0 4.2 215 chrX 19445911 intron kek5 + chrX 19446018 intron kek5 + chrX 19446126 intron kek5 + chrX_17_19445001 chrX_19445001 RAL-892 2761 chrX 19461144 19461152 chrX 19461260 19461268 4 116 5.5 6.0 5.8 0.6 124 chrX 19461144 intron kek5 + chrX 19461206 intron kek5 + chrX 19461268 intron kek5 + chrX_4_19460001 chrX_19460001 RAL-892 2762 chrX 19472125 19472130 chrX 19472707 19472719 jockey 4 586 3.0 3.5 3.2 1.0 594 chrX 19472125 intergenic kek5 + chrX 19472422 intergenic not near genes chrX 19472719 intergenic not near genes chrX_4_19470001 chrX_19470001 RAL-892 2763 chrX 19472153 19472155 chrX 19472698 19472744 jockey 5 566 1.0 2.0 1.5 2.0 591 chrX 19472153 intergenic kek5 + chrX 19472448 intergenic not near genes chrX 19472744 intergenic not near genes chrX_5_19470001 chrX_19470001 RAL-892 2764 chrX 19554669 19554689 chrX 19554766 19554766 6 94 7.5 6.5 7.0 0.8 97 chrX 19554669 intergenic not near genes chrX 19554718 intergenic not near genes chrX 19554766 intergenic not near genes chrX_6_19550001 chrX_19550001 RAL-892 2765 chrX 19662010 19662036 chrX 19662253 19662279 6 243 10.0 4.5 7.2 0.7 269 chrX 19662010 intron CG14223 - chrX 19662144 intron CG14223 - chrX 19662279 intron CG14223 - chrX_6_19660001 chrX_19660001 RAL-892 2766 chrX 19693736 19693769 chrX 19693841 19693874 8 105 7.0 0.0 3.5 1.8 138 chrX 19693736 intergenic Mer -,CG14229 - chrX 19693805 intergenic CG14229 -,Mer - chrX 19693874 intergenic CG14229 -,Mer - chrX_8_19690001 chrX_19690001 RAL-892 2767 chrX 19710061 19710098 chrX 19711857 19711904 S-element 8 1801 4.0 7.0 5.5 1.2 1843 chrX 19710061 intron meso18E - chrX 19710982 intron meso18E - chrX 19711904 intron meso18E - chrX_8_19710001 chrX_19710001 RAL-892 2768 chrX 19881437 19881482 chrX 19881536 19881583 13 100 5.5 2.0 3.8 2.7 146 chrX 19881437 intron Hers + chrX 19881510 intron Hers + chrX 19881583 intron Hers + chrX_13_19880001 chrX_19880001 RAL-892 2769 chrX 19981977 19982022 chrX 19982085 19982129 8 100 3.5 1.0 2.2 2.5 152 chrX 19981977 intergenic not near genes chrX 19982053 intergenic not near genes chrX 19982129 intergenic not near genes chrX_8_19980001 chrX_19980001 RAL-892 2770 chrX 19983859 19983896 chrX 19983959 19983996 7 100 2.5 4.5 3.5 1.6 137 chrX 19983859 intergenic not near genes chrX 19983928 intergenic not near genes chrX 19983996 intergenic not near genes chrX_7_19980001 chrX_19980001 RAL-892 2771 chrX 20042293 20042333 chrX 20042383 20042430 13 96 5.0 5.5 5.2 2.1 137 chrX 20042293 intron Dop2R - chrX 20042362 intron Dop2R - chrX 20042430 intron Dop2R - chrX_13_20040001 chrX_20040001 RAL-892 2772 chrX 20069245 20069294 chrX 20069396 20069447 7 149 2.0 1.0 1.5 2.8 202 chrX 20069245 intergenic not near genes chrX 20069346 intergenic not near genes chrX 20069447 intergenic not near genes chrX_7_20065001 chrX_20065001 RAL-892 2773 chrX 20125375 20125398 chrX 20125477 20125500 5 102 3.0 4.5 3.8 1.0 125 chrX 20125375 intergenic CG34331 + chrX 20125438 intergenic CG34331 + chrX 20125500 intergenic CG34331 + chrX_5_20125001 chrX_20125001 RAL-892 2774 chrX 20144298 20144315 chrX 20144398 20144415 5 100 2.5 4.0 3.2 1.2 117 chrX 20144298 intergenic not near genes chrX 20144356 intergenic not near genes chrX 20144415 intergenic not near genes chrX_5_20140001 chrX_20140001 RAL-892 2775 chrX 20312865 20312895 chrX 20312958 20312992 11 96 4.5 4.5 4.5 2.0 127 chrX 20312865 intron CG1504 - chrX 20312928 intron CG1504 - chrX 20312992 intron CG1504 - chrX_11_20310001 chrX_20310001 RAL-892 2776 chrX 20363011 20363036 chrX 20363116 20363141 9 104 1.0 0.0 0.5 6.0 130 chrX 20363011 intergenic not near genes chrX 20363076 intergenic not near genes chrX 20363141 intergenic not near genes chrX_9_20360001 chrX_20360001 RAL-892 2777 chrX 20377329 20377342 chrX 20378816 20378829 hobo 5 1486 2.5 6.0 4.2 1.0 1500 chrX 20377329 intergenic not near genes chrX 20378079 intergenic not near genes chrX 20378829 intergenic not near genes chrX_5_20375001 chrX_20375001 RAL-892 2778 chrX 20427118 20427132 chrX 20427265 20427279 7 147 31.5 38.5 35.0 0.2 161 chrX 20427118 intergenic CG15456 -,CG11710 - chrX 20427198 intergenic CG15456 -,CG11710 - chrX 20427279 intergenic CG11710 -,CG15456 - chrX_7_20425001 chrX_20425001 RAL-892 2779 chrX 20426179 20426227 chrX 20428373 20428401 6 2189 36.0 19.5 27.8 0.2 2222 chrX 20426179 exon cactin + chrX 20427290 intergenic CG11710 -,CG15456 - chrX 20428401 exon CG11710 - chrX_6_20425001 chrX_20425001 RAL-892 2780 chrX 20443161 20443202 chrX 20443257 20443298 5 95 4.0 4.0 4.0 1.0 137 chrX 20443161 exon CG1695 + chrX 20443230 intron CG1695 + chrX 20443298 intron CG1695 + chrX_5_20440001 chrX_20440001 RAL-892 2781 chrX 20467994 20468028 chrX 20468103 20468137 10 109 5.0 0.0 2.5 2.9 143 chrX 20467994 intron GstT3 + chrX 20468066 intron GstT3 + chrX 20468137 intron GstT3 + chrX_10_20465001 chrX_20465001 RAL-892 2782 chrX 20493910 20493925 chrX 20494091 20494106 7 181 0.0 5.0 2.5 2.0 196 chrX 20493910 intron RhoGAP19D - chrX 20494008 intron RhoGAP19D - chrX 20494106 intron RhoGAP19D - chrX_7_20490001 chrX_20490001 RAL-892 2783 chrX 20504112 20504151 chrX 20505653 20505692 transib2 7 1539 5.5 2.5 4.0 1.4 1580 chrX 20504112 intron RhoGAP19D - chrX 20504902 intron RhoGAP19D - chrX 20505692 intron RhoGAP19D - chrX_7_20500001 chrX_20500001 RAL-892 2784 chrX 20528579 20528632 chrX 20528947 20528984 12 367 3.5 0.5 2.0 4.0 405 chrX 20528579 intergenic not near genes chrX 20528782 intergenic not near genes chrX 20528984 intergenic not near genes chrX_12_20525001 chrX_20525001 RAL-892 2785 chrX 20531674 20531685 chrX 20531784 20531795 4 110 3.0 3.0 3.0 1.0 121 chrX 20531674 intergenic not near genes chrX 20531734 intergenic not near genes chrX 20531795 intergenic not near genes chrX_4_20530001 chrX_20530001 RAL-892 2786 chrX 20546541 20546566 chrX 20546727 20546751 9 186 0.0 3.0 1.5 3.6 210 chrX 20546541 intron RunxB + chrX 20546646 intron RunxB + chrX 20546751 intron RunxB + chrX_9_20545001 chrX_20545001 RAL-892 2787 chrX 20583726 20583758 chrX 20583895 20583959 6 185 0.5 0.0 0.2 5.0 233 chrX 20583726 intergenic not near genes chrX 20583842 intergenic not near genes chrX 20583959 intergenic not near genes chrX_6_20580001 chrX_20580001 RAL-892 2788 chrX 20635415 20635446 chrX 20635601 20635632 6 186 2.5 2.5 2.5 1.7 217 chrX 20635415 intergenic not near genes chrX 20635524 intergenic not near genes chrX 20635632 intergenic not near genes chrX_6_20635001 chrX_20635001 RAL-892 2789 chrX 20713897 20713922 chrX 20714000 20714025 5 103 0.5 1.0 0.8 2.8 128 chrX 20713897 intergenic not near genes chrX 20713961 intergenic not near genes chrX 20714025 intergenic not near genes chrX_5_20710001 chrX_20710001 RAL-892 2790 chrX 20741569 20741592 chrX 20741665 20741688 9 95 3.0 0.0 1.5 3.6 119 chrX 20741569 intergenic not near genes chrX 20741628 intergenic not near genes chrX 20741688 intergenic not near genes chrX_9_20740001 chrX_20740001 RAL-892 2791 chrX 20836724 20836736 chrX 20844344 20844358 roo 4 7622 5.5 6.0 5.8 0.6 7634 chrX 20836724 intron shakB - chrX 20840541 intron shakB - chrX 20844358 intron shakB - chrX_4_20840001 chrX_20840001 RAL-892 2792 chrX 20836741 20836753 chrX 20844337 20844375 roo 5 7615 3.5 6.0 4.8 0.9 7634 chrX 20836741 intron shakB - chrX 20840558 intron shakB - chrX 20844375 intron shakB - chrX_5_20840001 chrX_20840001 RAL-892 2793 chrX 20940703 20940743 chrX 20942192 20942207 hobo 4 1483 2.0 0.0 1.0 2.0 1504 chrX 20940703 intergenic not near genes chrX 20941455 intergenic not near genes chrX 20942207 intergenic not near genes chrX_4_20940001 chrX_20940001 RAL-892 2794 chrX 20947662 20947686 chrX 20948518 20948550 5 859 0.5 4.0 2.2 1.6 888 chrX 20947662 intergenic not near genes chrX 20948106 intergenic not near genes chrX 20948550 intergenic not near genes chrX_5_20945001 chrX_20945001 RAL-892 2795 chrX 20956979 20957013 chrX 20962441 20962475 I-element 12 5461 0.5 4.0 2.2 3.8 5496 chrX 20956979 intergenic not near genes chrX 20959727 intergenic not near genes chrX 20962475 intergenic Ser6 - chrX_12_20955001 chrX_20955001 RAL-892 2796 chrX 20981017 20981041 chrX 20981127 20981164 13 122 3.5 1.5 2.5 3.7 147 chrX 20981017 intergenic not near genes chrX 20981090 intergenic not near genes chrX 20981164 intergenic not near genes chrX_13_20980001 chrX_20980001 RAL-892 2797 chrX 21061849 21061896 chrX 21062354 21062401 roo 8 505 1.5 4.5 3.0 2.0 552 chrX 21061849 intron bves + chrX 21062125 intron bves + chrX 21062401 intron,3` UTR bves +,CG32512 - chrX_8_21060001 chrX_21060001 RAL-892 2798 chrX 21064976 21065027 chrX 21065498 21065549 11 524 18.5 20.5 19.5 0.5 573 chrX 21064976 intron,intron bves +,CG32512 - chrX 21065262 intron,intron bves +,CG32512 - chrX 21065549 intron,intron bves +,CG32512 - chrX_11_21065001 chrX_21065001 RAL-892 2799 chrX 21076306 21076354 chrX 21076405 21076453 14 95 2.5 0.0 1.2 6.4 147 chrX 21076306 intron bves + chrX 21076380 intron bves + chrX 21076453 intron bves + chrX_14_21075001 chrX_21075001 RAL-892 2800 chrX 21077576 21077631 chrX 21077685 21077721 6 105 1.5 4.0 2.8 1.6 145 chrX 21077576 intron bves + chrX 21077648 intron bves + chrX 21077721 intron bves + chrX_6_21075001 chrX_21075001 RAL-892 2801 chrX 21078762 21078777 chrX 21078860 21078875 5 98 4.0 0.0 2.0 1.7 113 chrX 21078762 intron bves + chrX 21078818 intron bves + chrX 21078875 intron bves + chrX_5_21075001 chrX_21075001 RAL-892 2802 chrX 21086110 21086158 chrX 21087159 21087207 jockey 11 1047 2.0 6.0 4.0 2.2 1097 chrX 21086110 intergenic not near genes chrX 21086658 intergenic not near genes chrX 21087207 intergenic not near genes chrX_11_21085001 chrX_21085001 RAL-892 2803 chrX 21088022 21088068 chrX 21088174 21088219 12 150 4.0 2.0 3.0 3.0 197 chrX 21088022 intergenic not near genes chrX 21088120 intergenic not near genes chrX 21088219 intergenic not near genes chrX_12_21085001 chrX_21085001 RAL-892 2804 chrX 21166122 21166163 chrX 21166220 21166264 6 99 2.5 1.0 1.8 2.1 142 chrX 21166122 intergenic not near genes chrX 21166193 intergenic not near genes chrX 21166264 intergenic not near genes chrX_6_21165001 chrX_21165001 RAL-892 2805 chrX 21190563 21190820 chrX 21190739 21190921 4 137 1.0 0.0 0.5 2.7 358 chrX 21190563 intergenic not near genes chrX 21190742 intergenic not near genes chrX 21190921 intergenic not near genes chrX_4_21190001 chrX_21190001 RAL-892 2806 chrX 21197045 21197066 chrX 21197136 21197164 5 90 6.5 5.5 6.0 0.7 119 chrX 21197045 intergenic not near genes chrX 21197104 intergenic not near genes chrX 21197164 intergenic not near genes chrX_5_21195001 chrX_21195001 RAL-892 2807 chrX 21197067 21197088 chrX 21197135 21197186 6 93 3.5 5.5 4.5 1.1 119 chrX 21197067 intergenic not near genes chrX 21197126 intergenic not near genes chrX 21197186 intergenic not near genes chrX_6_21195001 chrX_21195001 RAL-892 2808 chrX 21258822 21258843 chrX 21258942 21258963 6 120 4.0 2.5 3.2 1.4 141 chrX 21258822 intron CG32521 - chrX 21258892 intron CG32521 - chrX 21258963 intron CG32521 - chrX_6_21255001 chrX_21255001 RAL-892 2809 chrX 21264714 21264756 chrX 21264810 21264852 10 96 2.5 3.5 3.0 2.5 138 chrX 21264714 intron CG32521 - chrX 21264783 intron CG32521 - chrX 21264852 intron CG32521 - chrX_10_21260001 chrX_21260001 RAL-892 2810 chrX 21275157 21275193 chrX 21275255 21275291 12 97 4.0 2.5 3.2 2.9 134 chrX 21275157 intron CG32521 - chrX 21275224 intron CG32521 - chrX 21275291 intron CG32521 - chrX_12_21275001 chrX_21275001 RAL-892 2811 chrX 21328121 21328141 chrX 21328252 21328272 4 130 3.0 5.5 4.2 0.8 151 chrX 21328121 3` UTR CG1486 + chrX 21328196 intergenic CG1486 +,tty - chrX 21328272 intergenic CG1486 +,tty - chrX_4_21325001 chrX_21325001 RAL-892 2812 chrX 21358056 21358096 chrX 21358156 21358196 8 100 4.0 3.0 3.5 1.8 140 chrX 21358056 intergenic sol +,Sep1 + chrX 21358126 intergenic Sep1 +,sol + chrX 21358196 intergenic Sep1 +,sol + chrX_8_21355001 chrX_21355001 RAL-892 2813 chrX 21455200 21455240 chrX 21455399 21455446 8 204 2.0 0.0 1.0 4.0 246 chrX 21455200 intron CG42343 - chrX 21455323 intron CG42343 - chrX 21455446 intron CG42343 - chrX_8_21455001 chrX_21455001 RAL-892 2814 chrX 21458691 21458722 chrX 21464147 21464178 Ivk 7 5456 0.0 5.5 2.8 1.8 5487 chrX 21458691 intergenic not near genes chrX 21461434 intergenic not near genes chrX 21464178 intergenic not near genes chrX_7_21460001 chrX_21460001 RAL-892 2815 chrX 21500549 21500569 chrX 21500770 21500790 4 221 2.0 2.0 2.0 1.3 241 chrX 21500549 intron CR45082 - chrX 21500670 intron CR45082 - chrX 21500790 intron CR45082 - chrX_4_21500001 chrX_21500001 RAL-892 2816 chrX 21516983 21516995 chrX 21517074 21517079 4 91 7.0 7.0 7.0 0.5 96 chrX 21516983 intron CR45082 - chrX 21517031 intron CR45082 - chrX 21517079 intron CR45082 - chrX_4_21515001 chrX_21515001 RAL-892 2817 chrX 21581539 21581574 chrX 21581640 21581675 6 101 2.5 0.0 1.2 2.7 136 chrX 21581539 intergenic not near genes chrX 21581607 intergenic not near genes chrX 21581675 intergenic not near genes chrX_6_21580001 chrX_21580001 RAL-892 2818 chrX 21668237 21668288 chrX 21668342 21668386 11 103 4.0 0.5 2.2 3.4 149 chrX 21668237 intergenic not near genes chrX 21668312 intergenic not near genes chrX 21668386 intergenic not near genes chrX_11_21665001 chrX_21665001 RAL-892 2819 chrX 22259782 22259794 chrX 22260223 22260231 rover 4 438 80.5 9.5 45.0 0.1 449 chrX 22259782 intergenic not near genes chrX 22260006 intergenic not near genes chrX 22260231 intergenic not near genes chrX_4_22260001 chrX_22260001 RAL-892 2820 chrX 22478873 22478898 chrX 22479026 22479051 11 153 0.0 9.5 4.8 1.9 178 chrX 22478873 intron CG12576 - chrX 22478962 intron CG12576 - chrX 22479051 intron CG12576 - chrX_11_22475001 chrX_22475001 RAL-892 2821 chrX 22564564 22564582 chrX 22575116 22575134 jockey 6 10553 11.5 4.5 8.0 0.7 10570 chrX 22564564 intergenic not near genes chrX 22569849 intergenic not near genes chrX 22575134 intergenic not near genes chrX_6_22565001 chrX_22565001 RAL-892 2822 chrX 22677275 22677325 chrX 22677504 22677554 14 228 1.0 1.5 1.2 6.4 279 chrX 22677275 intron CR44997 + chrX 22677414 intron CR44997 + chrX 22677554 intron CR44997 + chrX_14_22675001 chrX_22675001 RAL-892 2823 chrX 22681464 22681475 chrX 22688940 22688951 HMS-Beagle2 4 7476 4.0 4.0 4.0 0.8 7487 chrX 22681464 intron CR44997 + chrX 22685208 intron CR44997 + chrX 22688951 intron CR44997 + chrX_4_22685001 chrX_22685001 RAL-892 2824 chrX 22694304 22694352 chrX 22694413 22694463 4 110 2.5 2.5 2.5 1.1 159 chrX 22694304 intron CR44997 + chrX 22694384 intron CR44997 + chrX 22694463 intron CR44997 + chrX_4_22690001 chrX_22690001 RAL-892 2825 chrX 22697480 22697517 chrX 22701797 22701834 Juan 6 4317 6.0 4.5 5.2 1.0 4354 chrX 22697480 intron CR44997 + chrX 22699657 intron CR44997 + chrX 22701834 intron CR44997 + chrX_6_22695001 chrX_22695001 RAL-892 2826 chrX 22771499 22771527 chrX 22774795 22774823 297 6 3306 4.0 1.0 2.5 1.7 3324 chrX 22771499 intron CR44997 + chrX 22773161 intron CR44997 + chrX 22774823 intron CR44997 + chrX_6_22770001 chrX_22770001 RAL-892 2827 chrX 22784071 22784104 chrX 22784160 22784207 8 101 4.0 3.5 3.8 1.7 136 chrX 22784071 intron CR44997 + chrX 22784139 intron CR44997 + chrX 22784207 intron CR44997 + chrX_8_22780001 chrX_22780001 RAL-892 2828 chrX 22811976 22812005 chrX 22816768 22816796 F-element 6 4792 3.5 4.0 3.8 1.2 4820 chrX 22811976 intergenic CG12446 - chrX 22814386 intergenic not near genes chrX 22816796 intergenic not near genes chrX_6_22810001 chrX_22810001 RAL-892 2829 chrX 22824220 22824443 chrX 22824366 22824595 27 149 3.5 4.5 4.0 5.4 375 chrX 22824220 intergenic fog - chrX 22824408 3` UTR fog - chrX 22824595 3` UTR fog - chrX_27_22820001 chrX_22820001 RAL-892 2830 chrX 22862385 22862389 chrX 22862578 22862584 4 194 11.5 13.0 12.2 0.3 199 chrX 22862385 intron CG42346 + chrX 22862484 intron CG42346 + chrX 22862584 intron CG42346 + chrX_4_22860001 chrX_22860001 RAL-892 2831 chrX 22867965 22867968 chrX 22868099 22868102 5 134 5.0 0.0 2.5 1.4 137 chrX 22867965 exon CG42346 + chrX 22868034 intron CG42346 + chrX 22868102 intron CG42346 + chrX_5_22865001 chrX_22865001 RAL-892 2832 chrX 22867971 22868007 chrX 22868090 22868149 8 134 2.5 0.0 1.2 3.6 178 chrX 22867971 exon CG42346 + chrX 22868060 intron CG42346 + chrX 22868149 intron CG42346 + chrX_8_22865001 chrX_22865001 RAL-892 2833 chrX 22870850 22870886 chrX 22870961 22870992 4 108 2.0 2.5 2.2 1.2 142 chrX 22870850 intron,3` UTR CG42346 +,CR43656 - chrX 22870921 intron,3` UTR CG42346 +,CR43656 - chrX 22870992 intron,3` UTR CG42346 +,CR43656 - chrX_4_22870001 chrX_22870001 RAL-892 2834 chrX 22894401 22894410 chrX 22895113 22895129 4 720 5.0 7.0 6.0 0.6 728 chrX 22894401 intergenic not near genes chrX 22894765 intergenic not near genes chrX 22895129 intergenic not near genes chrX_4_22890001 chrX_22890001 RAL-892 2835 chrX 22904765 22904806 chrX 22904867 22904901 9 100 3.0 2.5 2.8 2.4 136 chrX 22904765 intergenic not near genes chrX 22904833 intergenic not near genes chrX 22904901 intergenic not near genes chrX_9_22900001 chrX_22900001 RAL-892 2836 chrX 22916180 22916206 chrX 22916336 22916362 8 155 3.0 5.0 4.0 1.6 182 chrX 22916180 intergenic not near genes chrX 22916271 intergenic not near genes chrX 22916362 intergenic not near genes chrX_8_22915001 chrX_22915001 RAL-892 2837 chrX 22920356 22920394 chrX 22920458 22920499 6 103 4.5 4.0 4.2 1.2 143 chrX 22920356 intergenic not near genes chrX 22920428 intergenic not near genes chrX 22920499 intergenic not near genes chrX_6_22920001 chrX_22920001 RAL-892 2838 chrX 22922507 22922551 chrX 22922603 22922650 9 99 3.0 3.5 3.2 2.1 143 chrX 22922507 intergenic not near genes chrX 22922578 intergenic not near genes chrX 22922650 intergenic not near genes chrX_9_22920001 chrX_22920001 RAL-892 2839 chrX 22960787 22960797 chrX 22961009 22961019 5 222 0.0 5.0 2.5 1.4 232 chrX 22960787 3` UTR CG40485 - chrX 22960903 3` UTR CG40485 - chrX 22961019 3` UTR CG40485 - chrX_5_22960001 chrX_22960001 RAL-892 2840 chrX 22996297 22996337 chrX 23003551 23003591 roo 17 7254 4.0 4.5 4.2 3.3 7294 chrX 22996297 intron,intron stnA -,stnB - chrX 22999944 intron,intron stnA -,stnB - chrX 23003591 intron,intron stnA -,stnB - chrX_17_22995001 chrX_22995001 RAL-892 2841 chrY 104702 104713 chrY 104828 104839 4 126 4.0 5.0 4.5 0.7 137 chrY 104702 intron kl-5 - chrY 104770 intron kl-5 - chrY 104839 intron kl-5 - chrY_4_100001 chrY_100001 RAL-892 2842 chrY 975608 975815 chrY 975745 975886 5 107 85.0 107.0 96.0 0.1 278 chrY 975608 intergenic not near genes chrY 975747 intergenic not near genes chrY 975886 intergenic not near genes chrY_5_975001 chrY_975001 RAL-892 2843 chrY 3664992 3665020 chrY 3665116 3665144 4 124 0.5 1.0 0.8 2.2 152 chrY 3664992 intergenic CG40948 + chrY 3665068 intergenic not near genes chrY 3665144 intergenic not near genes chrY_4_3665001 chrY_3665001 RAL-892