SV#	Chr	Chr_coord_5p	Chr_coord_3p	TE	TE_coord_start	TE_coord_end	Reads_collapsed	Chr_Coord_Dist	Symmetry	avg_blat_score	Norm_RefGen_Reads	Coverage_Ratio	classification	comments	insert_code	loci_code	Sym_score	libname
1	chr2L	309409	309456	hobo	5	2914	9	47	'6-3	65.37	6.0	1.3	intron	Plc21C +	chr2L_9_305001	chr2L_305001	0.67	RAL-88
2	chr2L	584002	584031	G2	389	418	8	29	'4-4	66.25	6.3	1.1	3` UTR	Gsc -	chr2L_8_580001	chr2L_580001	0.50	RAL-88
3	chr2L	1555055	1555162	P-element	2878	2811	8	107	'5-3	54.98	5.2	1.3	intergenic	haf +	chr2L_8_1555001	chr2L_1555001	0.62	RAL-88
4	chr2L	1747004	1747069	roo	403	9	9	65	'6-3	65.74	7.8	1.0	intron	CG17646 +	chr2L_9_1745001	chr2L_1745001	0.67	RAL-88
5	chr2L	1755710	1755741	roo	33	8665	9	31	'4-5	64.24	9.4	0.9	exon	Gr22f -	chr2L_9_1755001	chr2L_1755001	0.44	RAL-88
6	chr2L	2518624	2518655	hobo	2	33	10	31	'4-6	66.26	9.4	1.0	intergenic	not near genes	chr2L_10_2515001	chr2L_2515001	0.40	RAL-88
7	chr2L	2592013	2592071	roo	8665	9050	5	58	'3-2	63.47	3.1	1.2	intron	CG15394 +	chr2L_5_2590001	chr2L_2590001	0.60	RAL-88
8	chr2L	2834808	2834835	jockey	16	7	9	27	'4-5	60.14	3.9	1.8	intergenic	CG3119 -	chr2L_9_2830001	chr2L_2830001	0.44	RAL-88
9	chr2L	2940593	2940671	Transpac	1	308	12	78	'7-5	64.29	4.9	2.0	intron	lilli +	chr2L_12_2940001	chr2L_2940001	0.58	RAL-88
10	chr2L	3001536	3001599	FB	6	8	12	63	'5-7	64.82	5.6	1.8	intron	CG17265 +	chr2L_12_3000001	chr2L_3000001	0.42	RAL-88
11	chr2L	4140015	4140108	Stalker2	7247	401	5	93	'2-3	56.17	4.8	0.9	intergenic	not near genes	chr2L_5_4140001	chr2L_4140001	0.40	RAL-88
12	chr2L	4375518	4375593	roo	408	8667	11	75	'5-6	63.19	4.6	2.0	intron	Traf4 +	chr2L_11_4375001	chr2L_4375001	0.45	RAL-88
13	chr2L	4415824	4415857	jockey	4	35	8	33	'6-2	60.05	6.2	1.1	intron	CG15431 -	chr2L_8_4415001	chr2L_4415001	0.75	RAL-88
14	chr2L	4434267	4434321	FB	12	11	5	54	'2-3	61.27	5.6	0.8	intron,intron,intron	CG15431 -,CG34177 +,CG34178 +	chr2L_5_4430001	chr2L_4430001	0.40	RAL-88
15	chr2L	4633880	4633912	roo	9036	9069	4	32	'3-1	70.57	6.3	0.5	3` UTR	CR45452 -	chr2L_4_4630001	chr2L_4630001	0.75	RAL-88
16	chr2L	4859846	4859891	roo	26	407	6	45	'1-5	63.41	3.3	1.4	intron	pog +	chr2L_6_4855001	chr2L_4855001	0.17	RAL-88
17	chr2L	5556696	5556759	roo	393	8666	9	63	'4-5	63.91	7.2	1.1	exon	GluRIIA +	chr2L_9_5555001	chr2L_5555001	0.44	RAL-88
18	chr2L	5610891	5610949	hobo	8	2932	8	58	'6-2	58.49	3.7	1.7	intron	CG14010 -	chr2L_8_5610001	chr2L_5610001	0.75	RAL-88
19	chr2L	5724324	5724367	1360	3369	14	6	43	'1-5	66.30	0.0	6.0	intergenic	CG11030 +,sip1 +	chr2L_6_5720001	chr2L_5720001	0.17	RAL-88
20	chr2L	5758596	5758644	roo	9	9050	9	48	'6-3	65.92	5.3	1.4	intron	CG11030 +	chr2L_9_5755001	chr2L_5755001	0.67	RAL-88
21	chr2L	5779169	5779213	roo	8686	394	7	44	'3-4	63.26	3.1	1.7	intron	CG9171 -	chr2L_7_5775001	chr2L_5775001	0.43	RAL-88
22	chr2L	5813750	5813811	roo	400	8662	12	61	'5-7	67.33	7.1	1.5	intergenic	not near genes	chr2L_12_5810001	chr2L_5810001	0.42	RAL-88
23	chr2L	5949141	5949191	P-element	20	6	4	50	'3-1	42.51	2.3	1.2	intergenic	Gpdh +,CG9044 +	chr2L_4_5945001	chr2L_5945001	0.75	RAL-88
24	chr2L	5971618	5971683	P-element	2878	2883	6	65	'4-2	48.29	5.3	1.0	intergenic	chic -	chr2L_6_5970001	chr2L_5970001	0.67	RAL-88
25	chr2L	6015956	6015973	hobo	32	15	4	17	'2-2	59.84	0.4	2.9	intron	H2.0 -	chr2L_4_6015001	chr2L_6015001	0.50	RAL-88
26	chr2L	6074051	6074078	jockey	28	1	7	27	'2-5	65.39	5.7	1.0	intergenic	Kr-h2 +,CR43801 -	chr2L_7_6070001	chr2L_6070001	0.29	RAL-88
27	chr2L	6161637	6161695	Tirant	8503	14	10	58	'5-5	62.49	5.4	1.6	intergenic	CG13989 +	chr2L_10_6160001	chr2L_6160001	0.50	RAL-88
28	chr2L	6361661	6361688	hobo	2910	7	6	27	'1-5	62.63	3.3	1.4	intergenic	CR44778 +	chr2L_6_6360001	chr2L_6360001	0.17	RAL-88
29	chr2L	7007467	7007531	roo	1	395	5	64	'1-4	69.87	2.2	1.6	intron	uif -	chr2L_5_7005001	chr2L_7005001	0.20	RAL-88
30	chr2L	7081244	7081320	blood	375	7009	9	76	'7-2	63.66	5.8	1.3	intron	Pvf2 -	chr2L_9_7080001	chr2L_7080001	0.78	RAL-88
31	chr2L	8132225	8132298	roo	406	8666	8	73	'3-5	63.74	2.3	2.4	intron	CG8668 +	chr2L_8_8130001	chr2L_8130001	0.38	RAL-88
32	chr2L	8168958	8169034	roo	404	8664	4	76	'3-1	63.00	2.9	1.0	intron	Piezo +	chr2L_4_8165001	chr2L_8165001	0.75	RAL-88
33	chr2L	8176413	8176477	1360	3378	1	6	64	'1-5	66.68	3.8	1.2	intron	Piezo +	chr2L_6_8175001	chr2L_8175001	0.17	RAL-88
34	chr2L	8271493	8271591	297	394	1	4	98	'2-2	59.67	2.1	1.3	intron	Btk29A -	chr2L_4_8270001	chr2L_8270001	0.50	RAL-88
35	chr2L	8287854	8287871	17.6	3	6947	4	17	'1-3	63.33	6.0	0.6	intron	Btk29A -	chr2L_4_8285001	chr2L_8285001	0.25	RAL-88
36	chr2L	8533095	8533163	blood	7024	377	6	68	'2-4	56.79	3.1	1.5	intron	CG17834 +	chr2L_6_8530001	chr2L_8530001	0.33	RAL-88
37	chr2L	8951604	8951656	P-element	2882	14	4	52	'3-1	54.93	1.8	1.4	intergenic	C1GalTA -	chr2L_4_8950001	chr2L_8950001	0.75	RAL-88
38	chr2L	9418506	9418573	opus	498	12	8	67	'6-2	69.99	2.5	2.3	intron	Mco1 +	chr2L_8_9415001	chr2L_9415001	0.75	RAL-88
39	chr2L	9598864	9598923	1360	19	1	6	59	'4-2	65.65	4.4	1.1	intergenic	CG4382 -	chr2L_6_9595001	chr2L_9595001	0.67	RAL-88
40	chr2L	9838585	9838632	roo	402	8691	6	47	'4-2	68.36	5.6	0.9	intron	nAChRalpha6 -	chr2L_6_9835001	chr2L_9835001	0.67	RAL-88
41	chr2L	9851081	9851134	412	1	467	12	53	'9-3	66.52	4.9	2.0	intron	nAChRalpha6 -	chr2L_12_9850001	chr2L_9850001	0.75	RAL-88
42	chr2L	10478933	10479014	opus	7115	498	6	81	'1-5	65.06	6.1	0.8	intron	RluA-2 +	chr2L_6_10475001	chr2L_10475001	0.17	RAL-88
43	chr2L	10502325	10502368	roo	403	8696	5	43	'3-2	70.42	5.7	0.7	intron	Myo31DF -	chr2L_5_10500001	chr2L_10500001	0.60	RAL-88
44	chr2L	10698909	10698960	roo	403	22	4	51	'3-1	66.05	5.7	0.6	intergenic	Lip1 -	chr2L_4_10695001	chr2L_10695001	0.75	RAL-88
45	chr2L	10782719	10782790	Burdock	6382	6134	5	71	'3-2	70.83	5.7	0.7	intron	CG31869 -	chr2L_5_10780001	chr2L_10780001	0.60	RAL-88
46	chr2L	10885747	10885788	roo	401	30	5	41	'3-2	71.25	6.6	0.7	intergenic	not near genes	chr2L_5_10885001	chr2L_10885001	0.60	RAL-88
47	chr2L	11576066	11576088	Stalker2	7254	7274	6	22	'2-4	64.75	7.3	0.7	intergenic	not near genes	chr2L_6_11575001	chr2L_11575001	0.33	RAL-88
48	chr2L	11712286	11712315	hobo	2919	14	7	29	'4-3	61.22	4.9	1.2	intergenic	not near genes	chr2L_7_11710001	chr2L_11710001	0.57	RAL-88
49	chr2L	12233320	12233383	opus	7485	3	4	63	'2-2	64.23	3.5	0.9	intron	aret +	chr2L_4_12230001	chr2L_12230001	0.50	RAL-88
50	chr2L	12257364	12257430	mdg1	3	409	4	66	'2-2	64.00	4.0	0.8	intron	aret +	chr2L_4_12255001	chr2L_12255001	0.50	RAL-88
51	chr2L	12446056	12446126	Burdock	6138	6386	5	70	'3-2	65.90	6.5	0.7	intergenic	CG5421 -,Oatp33Ea -	chr2L_5_12445001	chr2L_12445001	0.60	RAL-88
52	chr2L	12760382	12760450	412	4	7537	8	68	'2-6	64.18	2.1	2.6	3` UTR	CG15483 -	chr2L_8_12760001	chr2L_12760001	0.25	RAL-88
53	chr2L	12799154	12799180	jockey	4703	4678	5	26	'3-2	62.48	7.0	0.6	intergenic	not near genes	chr2L_5_12795001	chr2L_12795001	0.60	RAL-88
54	chr2L	12833347	12833399	412	492	28	6	52	'5-1	61.63	5.8	0.9	intergenic	not near genes	chr2L_6_12830001	chr2L_12830001	0.83	RAL-88
55	chr2L	12850927	12850977	roo	9071	30	8	50	'7-1	67.13	5.8	1.2	intergenic	not near genes	chr2L_8_12850001	chr2L_12850001	0.88	RAL-88
56	chr2L	13060321	13060379	P-element	2	16	4	58	'2-2	52.77	5.7	0.6	intergenic	CG9932 -	chr2L_4_13060001	chr2L_13060001	0.50	RAL-88
57	chr2L	13149604	13149682	roo	8668	410	7	78	'2-5	72.95	4.5	1.3	intergenic	not near genes	chr2L_7_13145001	chr2L_13145001	0.29	RAL-88
58	chr2L	13155929	13155996	invader4	318	2765	7	67	'2-5	71.51	1.7	2.6	intergenic	not near genes	chr2L_7_13155001	chr2L_13155001	0.29	RAL-88
59	chr2L	13436857	13436894	hobo	7	2907	5	37	'4-1	61.92	10.8	0.4	intron,intron	CG42784 +,Tehao +	chr2L_5_13435001	chr2L_13435001	0.80	RAL-88
60	chr2L	13481440	13481473	jockey	4698	4973	4	33	'1-3	62.24	4.3	0.8	intron	CG42784 +	chr2L_4_13480001	chr2L_13480001	0.25	RAL-88
61	chr2L	13615705	13615764	hopper	1	20	10	59	'7-3	65.95	4.6	1.8	intron	kuz +	chr2L_10_13615001	chr2L_13615001	0.70	RAL-88
62	chr2L	13626619	13626645	F-element	195	169	6	26	'4-2	58.14	3.7	1.3	intron	kuz +	chr2L_6_13625001	chr2L_13625001	0.67	RAL-88
63	chr2L	13684718	13684793	copia	251	1	6	75	'3-3	65.27	6.0	0.9	intron	CG31814 -	chr2L_6_13680001	chr2L_13680001	0.50	RAL-88
64	chr2L	13769543	13769600	HMS-Beagle2	6892	7179	7	57	'4-3	62.00	3.6	1.5	intron	TM9SF4 +	chr2L_7_13765001	chr2L_13765001	0.57	RAL-88
65	chr2L	13812866	13812918	Tirant	8499	8111	5	52	'4-1	60.21	6.4	0.7	3` UTR,exon	CG16865 +,CG16888 -	chr2L_5_13810001	chr2L_13810001	0.80	RAL-88
66	chr2L	13846424	13846494	roo	8677	411	11	70	'1-10	64.03	5.5	1.7	intron	CenG1A +	chr2L_11_13845001	chr2L_13845001	0.09	RAL-88
67	chr2L	14002412	14002461	Burdock	222	6134	4	49	'2-2	69.46	4.0	0.8	intergenic	not near genes	chr2L_4_14000001	chr2L_14000001	0.50	RAL-88
68	chr2L	14348798	14348815	copia	6	4894	4	17	'3-1	66.22	9.8	0.4	intergenic	mTTF -,l(2)34Fc -,CR44850 +	chr2L_4_14345001	chr2L_14345001	0.75	RAL-88
69	chr2L	14941844	14941907	blood	368	5	10	63	'7-3	61.88	5.9	1.4	intron	CG42313 -	chr2L_10_14940001	chr2L_14940001	0.70	RAL-88
70	chr2L	15174151	15174201	flea	4981	4765	5	50	'1-4	67.96	2.5	1.4	intron	CG4168 -	chr2L_5_15170001	chr2L_15170001	0.20	RAL-88
71	chr2L	15383255	15383338	flea	256	4756	10	83	'5-5	66.02	2.3	3.0	intergenic	not near genes	chr2L_10_15380001	chr2L_15380001	0.50	RAL-88
72	chr2L	15554349	15554423	hobo	2938	2	11	74	'2-9	66.94	5.3	1.7	intron	kek3 +	chr2L_11_15550001	chr2L_15550001	0.18	RAL-88
73	chr2L	15793152	15793216	412	494	7070	5	64	'3-2	68.09	5.0	0.8	intergenic	not near genes	chr2L_5_15790001	chr2L_15790001	0.60	RAL-88
74	chr2L	15834033	15834093	hopper	1406	1403	4	60	'2-2	58.00	1.4	1.7	intergenic	CR45368 -	chr2L_4_15830001	chr2L_15830001	0.50	RAL-88
75	chr2L	15850808	15850869	mdg1	7038	7439	4	61	'2-2	61.66	5.2	0.6	intergenic	not near genes	chr2L_4_15850001	chr2L_15850001	0.50	RAL-88
76	chr2L	16254361	16254411	FB	11	15	5	50	'3-2	60.87	6.2	0.7	intron	PRL-1 -	chr2L_5_16250001	chr2L_16250001	0.60	RAL-88
77	chr2L	16643497	16643549	opus	7493	21	9	52	'4-5	74.12	7.0	1.1	intron	CG42389 +	chr2L_9_16640001	chr2L_16640001	0.44	RAL-88
78	chr2L	16695032	16695060	1360	1	29	7	28	'4-3	64.31	5.9	1.0	intron	grp +	chr2L_7_16695001	chr2L_16695001	0.57	RAL-88
79	chr2L	16850720	16850744	I-element	4	28	6	24	'4-2	61.77	2.9	1.5	intron	CG31810 -	chr2L_6_16850001	chr2L_16850001	0.67	RAL-88
80	chr2L	17157522	17157589	rover	6959	341	9	67	'7-2	63.29	4.5	1.6	intron,intron	CG34106 +,beat-IIIa +	chr2L_9_17155001	chr2L_17155001	0.78	RAL-88
81	chr2L	17196073	17196135	pogo	2097	14	9	62	'4-5	66.07	1.2	4.1	intron	beat-IIIc -	chr2L_9_17195001	chr2L_17195001	0.44	RAL-88
82	chr2L	17288659	17288723	Transpac	4926	299	5	64	'1-4	64.45	4.5	0.9	intergenic	not near genes	chr2L_5_17285001	chr2L_17285001	0.20	RAL-88
83	chr2L	17315284	17315358	opus	7493	7116	5	74	'4-1	66.13	2.6	1.4	intergenic	not near genes	chr2L_5_17315001	chr2L_17315001	0.80	RAL-88
84	chr2L	17604966	17605019	412	7539	21	4	53	'3-1	60.33	4.7	0.7	intergenic	not near genes	chr2L_4_17600001	chr2L_17600001	0.75	RAL-88
85	chr2L	17730452	17730504	pogo	2083	13	6	52	'2-4	64.70	4.2	1.2	intron	CadN -	chr2L_6_17730001	chr2L_17730001	0.33	RAL-88
86	chr2L	17751472	17751503	jockey	4675	4706	6	31	'3-3	65.09	5.6	0.9	intron	CadN -	chr2L_6_17750001	chr2L_17750001	0.50	RAL-88
87	chr2L	17993482	17993540	1360	3382	14	6	58	'4-2	71.24	5.6	0.9	intergenic	CR44767 -	chr2L_6_17990001	chr2L_17990001	0.67	RAL-88
88	chr2L	18570491	18570549	FB	12	7	4	58	'2-2	59.88	3.1	1.0	intron	Pde11 -	chr2L_4_18570001	chr2L_18570001	0.50	RAL-88
89	chr2L	18802708	18802763	flea	4756	4987	7	55	'5-2	70.55	7.7	0.8	intergenic	not near genes	chr2L_7_18800001	chr2L_18800001	0.71	RAL-88
90	chr2L	19023648	19023722	roo	9065	1	5	74	'1-4	56.80	4.2	1.0	intergenic	CG15172 +,CR43700 -	chr2L_5_19020001	chr2L_19020001	0.20	RAL-88
91	chr2L	19533011	19533060	roo	9043	8667	4	49	'2-2	70.00	2.1	1.3	intergenic	CG10137 +,CG33116 +	chr2L_4_19530001	chr2L_19530001	0.50	RAL-88
92	chr2L	19834191	19834252	roo	8663	387	8	61	'5-3	69.90	4.1	1.6	intron	sick +	chr2L_8_19830001	chr2L_19830001	0.62	RAL-88
93	chr2L	19851894	19851990	mdg3	248	5253	5	96	'2-3	50.67	3.4	1.1	intron	sick +	chr2L_5_19850001	chr2L_19850001	0.40	RAL-88
94	chr2L	20100256	20100321	pogo	12	2095	9	65	'6-3	63.91	3.9	1.8	intron	Kua +	chr2L_9_20100001	chr2L_20100001	0.67	RAL-88
95	chr2L	20257173	20257247	pogo	2	2093	9	74	'7-2	65.42	4.6	1.6	5` UTR	CG17571 -	chr2L_9_20255001	chr2L_20255001	0.78	RAL-88
96	chr2L	20792591	20792666	roo	8664	403	8	75	'6-2	67.85	5.8	1.2	intron	vari -	chr2L_8_20790001	chr2L_20790001	0.75	RAL-88
97	chr2L	20852112	20852170	pogo	2079	4	4	58	'1-3	67.66	3.9	0.8	intergenic	twit +	chr2L_4_20850001	chr2L_20850001	0.25	RAL-88
98	chr2L	21276702	21276771	1360	3385	3385	8	69	'6-2	64.81	5.9	1.2	intron	CG8671 +	chr2L_8_21275001	chr2L_21275001	0.75	RAL-88
99	chr2L	21360432	21360483	HMS-Beagle2	284	6886	5	51	'1-4	65.60	6.5	0.7	intergenic	not near genes	chr2L_5_21360001	chr2L_21360001	0.20	RAL-88
100	chr2L	21400105	21400170	pogo	2095	8	5	65	'4-1	66.56	5.3	0.8	intergenic	not near genes	chr2L_5_21400001	chr2L_21400001	0.80	RAL-88
101	chr2L	22164501	22164558	1360	11	3379	12	57	'3-9	64.95	2.6	3.3	3` UTR	CG42748 +	chr2L_12_22160001	chr2L_22160001	0.25	RAL-88
102	chr2L	22632195	22632256	roo	395	4	5	61	'2-3	62.25	3.2	1.2	intron	CG40006 -	chr2L_5_22630001	chr2L_22630001	0.40	RAL-88
103	chr2L	23295816	23295863	micropia	455	5	6	47	'2-4	63.16	3.9	1.2	intergenic	not near genes	chr2L_6_23295001	chr2L_23295001	0.33	RAL-88
104	chr2L	23299980	23300000	invader4	321	340	8	20	'6-2	56.48	5.6	1.2	intergenic	not near genes	chr2L_8_23295001	chr2L_23295001	0.75	RAL-88
105	chr2R	558417	558486	springer	7518	10	10	69	'6-4	63.91	6.7	1.3	intron	CG40378 +	chr2R_10_555001	chr2R_555001	0.60	RAL-88
106	chr2R	640037	640119	flea	4758	257	5	82	'3-2	72.00	3.6	1.1	intron	CG40378 +	chr2R_5_640001	chr2R_640001	0.60	RAL-88
107	chr2R	1879536	1879610	ZAM	4	8413	5	74	'3-2	64.17	6.3	0.7	intron	CG17684 -	chr2R_5_1875001	chr2R_1875001	0.60	RAL-88
108	chr2R	3523841	3523870	Cr1a	4000	4004	6	29	'2-4	62.26	4.0	1.2	intergenic	not near genes	chr2R_6_3520001	chr2R_3520001	0.33	RAL-88
109	chr2R	3594497	3594550	copia	4880	239	4	53	'2-2	67.67	0.6	2.5	intergenic	not near genes	chr2R_4_3590001	chr2R_3590001	0.50	RAL-88
110	chr2R	3906133	3906153	flea	4757	4777	5	20	'1-4	64.49	10.8	0.4	intron	uex -	chr2R_5_3905001	chr2R_3905001	0.20	RAL-88
111	chr2R	3919667	3919683	1360	8	25	7	16	'5-2	58.77	5.8	1.0	intron	uex -	chr2R_7_3915001	chr2R_3915001	0.71	RAL-88
112	chr2R	4321231	4321283	1360	15	3377	8	52	'7-1	61.80	4.6	1.4	intergenic	not near genes	chr2R_8_4320001	chr2R_4320001	0.88	RAL-88
113	chr2R	4584697	4584746	Max-element	8248	8527	9	49	'1-8	63.48	6.7	1.2	intergenic	not near genes	chr2R_9_4580001	chr2R_4580001	0.11	RAL-88
114	chr2R	4606217	4606288	1360	3382	1	10	71	'5-5	61.93	7.0	1.2	intron	p120ctn +	chr2R_10_4605001	chr2R_4605001	0.50	RAL-88
115	chr2R	5284562	5284578	Doc4-element	2641	2628	7	16	'3-4	52.34	7.7	0.8	intron	d4 +	chr2R_7_5280001	chr2R_5280001	0.43	RAL-88
116	chr2R	5424266	5424289	1360	3340	3316	6	23	'2-4	69.15	5.9	0.9	intron	laccase2 +	chr2R_6_5420001	chr2R_5420001	0.33	RAL-88
117	chr2R	5452851	5452926	copia	257	4876	4	75	'1-3	66.29	2.9	1.0	intron	laccase2 +	chr2R_4_5450001	chr2R_5450001	0.25	RAL-88
118	chr2R	5485065	5485134	1360	3385	6	8	69	'7-1	65.62	2.6	2.2	intron	CG30440 -	chr2R_8_5485001	chr2R_5485001	0.88	RAL-88
119	chr2R	5851343	5851384	mdg1	408	26	4	41	'3-1	64.51	5.2	0.6	intron	dpr12 +	chr2R_4_5850001	chr2R_5850001	0.75	RAL-88
120	chr2R	5938297	5938353	opus	490	18	7	56	'5-2	63.72	5.7	1.0	intron	CR44126 +	chr2R_7_5935001	chr2R_5935001	0.71	RAL-88
121	chr2R	6544002	6544046	I-element	8	5337	5	44	'4-1	60.87	3.8	1.0	intron	jing +	chr2R_5_6540001	chr2R_6540001	0.80	RAL-88
122	chr2R	6565018	6565090	blood	5	376	13	72	'9-4	64.60	5.1	2.1	intron	jing +	chr2R_13_6565001	chr2R_6565001	0.69	RAL-88
123	chr2R	6883483	6883517	roo	9038	409	8	34	'2-6	65.50	3.4	1.8	intron	Spn42Dd +	chr2R_8_6880001	chr2R_6880001	0.25	RAL-88
124	chr2R	6971521	6971566	P-element	1	2855	4	45	'2-2	50.79	9.0	0.4	5` UTR,5` UTR	mim -,CheB42c -	chr2R_4_6970001	chr2R_6970001	0.50	RAL-88
125	chr2R	7106445	7106508	P-element	2882	2884	10	63	'2-8	49.67	6.3	1.4	intron	esn +	chr2R_10_7105001	chr2R_7105001	0.20	RAL-88
126	chr2R	7195778	7195849	blood	7008	7379	20	71	'11-9	65.09	4.9	3.4	intron	pk +	chr2R_20_7195001	chr2R_7195001	0.55	RAL-88
127	chr2R	7225901	7225968	hopper	4	1406	9	67	'5-4	65.33	2.7	2.4	intergenic	not near genes	chr2R_9_7225001	chr2R_7225001	0.56	RAL-88
128	chr2R	7245883	7245927	P-element	21	2877	7	44	'2-5	41.29	4.9	1.2	intergenic	Ady43A -	chr2R_7_7245001	chr2R_7245001	0.29	RAL-88
129	chr2R	7247739	7247803	1360	8	4	17	64	'9-8	64.43	4.1	3.3	intergenic	not near genes	chr2R_17_7245001	chr2R_7245001	0.53	RAL-88
130	chr2R	7540614	7540634	297	6580	6601	5	20	'3-2	72.71	0.7	2.9	intron	Corin +	chr2R_5_7540001	chr2R_7540001	0.60	RAL-88
131	chr2R	7552039	7552089	Stalker2	7629	9	8	50	'3-5	60.37	2.1	2.6	intron	Corin +	chr2R_8_7550001	chr2R_7550001	0.38	RAL-88
132	chr2R	7625983	7626048	jockey	4991	4763	14	65	'8-6	58.84	3.1	3.4	intron	CG43340 +	chr2R_14_7625001	chr2R_7625001	0.57	RAL-88
133	chr2R	8053200	8053261	I-element	5346	1	11	61	'4-7	68.41	1.8	3.9	3` UTR	CG12769 -	chr2R_11_8050001	chr2R_8050001	0.36	RAL-88
134	chr2R	8086743	8086945	1360	3333	3386	16	202	'1-15	72.65	4.4	3.0	3` UTR	sut1 +	chr2R_16_8085001	chr2R_8085001	0.06	RAL-88
135	chr2R	8378596	8378671	pogo	2098	2	11	75	'5-6	64.10	3.5	2.4	intron	pdm3 +	chr2R_11_8375001	chr2R_8375001	0.45	RAL-88
136	chr2R	8775011	8775089	roo	4	410	18	78	'7-11	68.12	4.6	3.2	intergenic	not near genes	chr2R_18_8775001	chr2R_8775001	0.39	RAL-88
137	chr2R	8786295	8786357	HMS-Beagle	7036	6810	11	62	'4-7	62.42	3.0	2.8	intergenic	not near genes	chr2R_11_8785001	chr2R_8785001	0.36	RAL-88
138	chr2R	9454243	9454314	flea	4758	5010	9	71	'4-5	67.73	3.2	2.1	intron	Camta +	chr2R_9_9450001	chr2R_9450001	0.44	RAL-88
139	chr2R	9684186	9684246	pogo	8	2085	6	60	'3-3	68.74	0.5	4.0	intergenic	Mmp2 -	chr2R_6_9680001	chr2R_9680001	0.50	RAL-88
140	chr2R	9870959	9871029	roo	8671	405	8	70	'3-5	65.50	1.8	2.9	intron	cbx -	chr2R_8_9870001	chr2R_9870001	0.38	RAL-88
141	chr2R	9947749	9947809	hobo	9	2930	8	60	'5-3	65.60	6.7	1.0	intron	Mef2 -	chr2R_8_9945001	chr2R_9945001	0.62	RAL-88
142	chr2R	9960028	9960102	P-element	122	1	16	74	'6-10	52.18	3.2	3.8	5` UTR	Pal1 +	chr2R_16_9960001	chr2R_9960001	0.38	RAL-88
143	chr2R	9968361	9968415	1360	1	3375	6	54	'4-2	58.20	4.5	1.1	3` UTR	CG12133 +	chr2R_6_9965001	chr2R_9965001	0.67	RAL-88
144	chr2R	10405393	10405673	opus	7114	499	20	280	'19-1	66.81	5.1	3.3	intron	CG42732 -	chr2R_20_10405001	chr2R_10405001	0.95	RAL-88
145	chr2R	11394113	11394185	pogo	11	2096	5	72	'3-2	58.69	3.2	1.2	intron	sprt -	chr2R_5_11390001	chr2R_11390001	0.60	RAL-88
146	chr2R	12185337	12185383	accord	7375	25	9	46	'6-3	66.00	7.8	1.0	3` UTR,3` UTR	CG13175 +,CG33964 +	chr2R_9_12185001	chr2R_12185001	0.67	RAL-88
147	chr2R	12336603	12336650	pogo	2070	6	9	47	'4-5	68.58	2.6	2.5	intergenic	CG34021 +,CG8490 +	chr2R_9_12335001	chr2R_12335001	0.44	RAL-88
148	chr2R	13304930	13304997	Juan	4210	3	11	67	'6-5	62.10	2.0	3.7	intergenic	not near genes	chr2R_11_13300001	chr2R_13300001	0.55	RAL-88
149	chr2R	13379231	13379295	roo	411	9	10	64	'6-4	67.08	3.6	2.2	intergenic	not near genes	chr2R_10_13375001	chr2R_13375001	0.60	RAL-88
150	chr2R	13630642	13630719	blood	2	375	16	77	'9-7	62.33	4.3	3.0	intron	fas +	chr2R_16_13630001	chr2R_13630001	0.56	RAL-88
151	chr2R	13648838	13648903	hobo	5	2931	13	65	'8-5	63.84	5.5	2.0	intron	fas +	chr2R_13_13645001	chr2R_13645001	0.62	RAL-88
152	chr2R	14008758	14008833	roo	8662	403	9	75	'4-5	66.76	4.0	1.8	intron	mam +	chr2R_9_14005001	chr2R_14005001	0.44	RAL-88
153	chr2R	14848987	14849008	flea	4714	4696	8	21	'3-5	62.52	9.9	0.7	exon	SMC2 -	chr2R_8_14845001	chr2R_14845001	0.38	RAL-88
154	chr2R	14921489	14921559	pogo	4	2092	8	70	'6-2	65.00	3.1	2.0	intron	CG10249 -	chr2R_8_14920001	chr2R_14920001	0.75	RAL-88
155	chr2R	15156791	15156879	jockey	4585	4769	9	88	'8-1	63.60	3.2	2.1	intron	igl +	chr2R_9_15155001	chr2R_15155001	0.89	RAL-88
156	chr2R	15479122	15479190	pogo	2090	4	11	68	'6-5	65.71	1.5	4.4	intron	CG8180 -	chr2R_11_15475001	chr2R_15475001	0.55	RAL-88
157	chr2R	15783728	15783754	opus	477	499	7	26	'2-5	65.54	5.2	1.1	intron	Zasp52 -	chr2R_7_15780001	chr2R_15780001	0.29	RAL-88
158	chr2R	15785632	15785710	roo	407	2	21	78	'9-12	65.05	4.0	4.2	intron	Zasp52 -	chr2R_21_15785001	chr2R_15785001	0.43	RAL-88
159	chr2R	16091868	16091924	roo	401	16	9	56	'6-3	66.31	2.7	2.4	intron	Dg -	chr2R_9_16090001	chr2R_16090001	0.67	RAL-88
160	chr2R	16097549	16097624	pogo	2098	6	16	75	'11-5	64.34	2.6	4.4	intron	Dg -	chr2R_16_16095001	chr2R_16095001	0.69	RAL-88
161	chr2R	16356419	16356488	Burdock	245	3	6	69	'4-2	64.89	4.6	1.1	intergenic	not near genes	chr2R_6_16355001	chr2R_16355001	0.67	RAL-88
162	chr2R	16367301	16367370	copia	261	4886	4	69	'2-2	75.26	2.1	1.3	intergenic	not near genes	chr2R_4_16365001	chr2R_16365001	0.50	RAL-88
163	chr2R	16639519	16639567	pogo	2077	12	6	48	'3-3	65.94	1.1	2.9	intron	Alk -	chr2R_6_16635001	chr2R_16635001	0.50	RAL-88
164	chr2R	16878100	16878161	mdg3	247	20	8	61	'7-1	61.64	0.2	6.7	intron	CG8910 -	chr2R_8_16875001	chr2R_16875001	0.88	RAL-88
165	chr2R	16891786	16891814	jockey	4669	4699	4	28	'2-2	62.66	6.2	0.6	intron	CG8910 -	chr2R_4_16890001	chr2R_16890001	0.50	RAL-88
166	chr2R	17229828	17229886	I-element	2	5347	10	58	'5-5	57.75	5.4	1.6	intron	mbl +	chr2R_10_17225001	chr2R_17225001	0.50	RAL-88
167	chr2R	17339463	17339536	hobo	7	2709	11	73	'6-5	62.75	4.2	2.1	intron	mbl +	chr2R_11_17335001	chr2R_17335001	0.55	RAL-88
168	chr2R	17873798	17873854	P-element	2869	3	16	56	'6-10	43.21	3.4	3.6	intergenic	Elk +	chr2R_16_17870001	chr2R_17870001	0.38	RAL-88
169	chr2R	17906587	17906665	roo	8664	407	13	78	'7-6	67.70	3.4	3.0	intron	Elk +	chr2R_13_17905001	chr2R_17905001	0.54	RAL-88
170	chr2R	18053870	18053946	roo	8664	404	15	76	'6-9	64.95	5.5	2.3	exon	CG10911 -	chr2R_15_18050001	chr2R_18050001	0.40	RAL-88
171	chr2R	18402323	18402393	1360	3387	3382	13	70	'8-5	67.73	4.2	2.5	intergenic	not near genes	chr2R_13_18400001	chr2R_18400001	0.62	RAL-88
172	chr2R	21199828	21199845	jockey	4682	4688	8	17	'2-6	58.48	6.4	1.1	intergenic	Lapsyn +	chr2R_8_21195001	chr2R_21195001	0.25	RAL-88
173	chr2R	21201395	21201427	jockey	32	6	6	32	'4-2	67.15	19.4	0.3	intron,intron	CG44245 +,Glycogenin +	chr2R_6_21200001	chr2R_21200001	0.67	RAL-88
174	chr2R	21218396	21218460	Tirant	10	8498	13	64	'4-9	61.53	5.2	2.1	3` UTR	ASPP -	chr2R_13_21215001	chr2R_21215001	0.31	RAL-88
175	chr2R	21777492	21777570	opus	495	112	7	78	'5-2	57.33	3.0	1.8	intergenic	not near genes	chr2R_7_21775001	chr2R_21775001	0.71	RAL-88
176	chr2R	21951769	21951830	roo	8679	405	11	61	'1-10	62.83	2.9	2.8	intron	CG13488 +	chr2R_11_21950001	chr2R_21950001	0.09	RAL-88
177	chr2R	22090643	22090658	297	6585	6600	5	15	'4-1	64.98	7.1	0.6	exon	CG43393 -	chr2R_5_22090001	chr2R_22090001	0.80	RAL-88
178	chr2R	22138742	22138791	opus	7499	29	15	49	'7-8	66.54	4.8	2.6	intron	a +	chr2R_15_22135001	chr2R_22135001	0.47	RAL-88
179	chr2R	22767341	22767369	412	467	495	7	28	'5-2	65.19	4.7	1.2	intron	CG42260 -	chr2R_7_22765001	chr2R_22765001	0.71	RAL-88
180	chr2R	22769579	22769662	roo	8664	411	20	83	'9-11	64.88	3.5	4.4	intron	CG42260 -	chr2R_20_22765001	chr2R_22765001	0.45	RAL-88
181	chr2R	23170971	23171040	blood	7017	7389	10	69	'3-7	66.46	3.1	2.4	intron	CG34371 -	chr2R_10_23170001	chr2R_23170001	0.30	RAL-88
182	chr2R	23338503	23338532	jockey	4699	4672	4	29	'2-2	61.54	4.6	0.7	intergenic	not near genes	chr2R_4_23335001	chr2R_23335001	0.50	RAL-88
183	chr2R	23423647	23423703	diver	5893	222	4	56	'2-2	56.00	3.6	0.9	intron	CG9815 -	chr2R_4_23420001	chr2R_23420001	0.50	RAL-88
184	chr2R	23750232	23750293	blood	358	7012	8	61	'1-7	66.06	2.7	2.2	intergenic	CG12491 -,CG34105 -	chr2R_8_23750001	chr2R_23750001	0.12	RAL-88
185	chr2R	23832319	23832385	roo	9060	8664	21	66	'8-13	64.71	5.2	3.4	intron	CG5549 +	chr2R_21_23830001	chr2R_23830001	0.38	RAL-88
186	chr2R	24529643	24529719	412	1	7542	12	76	'6-6	67.32	4.5	2.2	exon	Ir60e -	chr2R_12_24525001	chr2R_24525001	0.50	RAL-88
187	chr2R	24891421	24891448	P-element	33	6	8	27	'3-5	46.79	5.4	1.2	intergenic	NaCP60E +,Ance-5 -	chr2R_8_24890001	chr2R_24890001	0.38	RAL-88
188	chr2R	25016765	25016830	FB	4	7	13	65	'9-4	60.29	6.0	1.9	intron	uzip +	chr2R_13_25015001	chr2R_25015001	0.69	RAL-88
189	chr3L	527615	527696	invader4	40	2759	9	81	'4-5	69.99	4.0	1.8	intron	klar -	chr3L_9_525001	chr3L_525001	0.44	RAL-88
190	chr3L	566839	566896	copia	232	4869	4	57	'1-3	69.66	3.0	1.0	intron	hipk +	chr3L_4_565001	chr3L_565001	0.25	RAL-88
191	chr3L	804733	804812	roo	408	8661	13	79	'2-11	68.07	4.7	2.3	intergenic	not near genes	chr3L_13_800001	chr3L_800001	0.15	RAL-88
192	chr3L	916435	916496	hobo	2937	10	13	61	'6-7	65.30	4.5	2.4	intron	Glut1 +	chr3L_13_915001	chr3L_915001	0.46	RAL-88
193	chr3L	1233929	1234003	pogo	3	2096	12	74	'7-5	68.75	5.1	2.0	exon	CG33965 +	chr3L_12_1230001	chr3L_1230001	0.58	RAL-88
194	chr3L	1283318	1283381	diver	5896	216	10	63	'5-5	59.04	2.3	3.0	intron	CG32333 +	chr3L_10_1280001	chr3L_1280001	0.50	RAL-88
195	chr3L	1994802	1994872	hopper	7	4	9	70	'3-6	63.51	2.7	2.4	intergenic	not near genes	chr3L_9_1990001	chr3L_1990001	0.33	RAL-88
196	chr3L	2153098	2153118	jockey	16	36	7	20	'2-5	63.61	5.6	1.1	intergenic	CG15822 -	chr3L_7_2150001	chr3L_2150001	0.29	RAL-88
197	chr3L	2240373	2240450	412	491	2	15	77	'7-8	60.42	2.1	4.8	intron	ACXD +	chr3L_15_2240001	chr3L_2240001	0.47	RAL-88
198	chr3L	3254971	3255039	1360	6	5	18	68	'11-7	65.70	4.6	3.2	intergenic	CR43626 +	chr3L_18_3250001	chr3L_3250001	0.61	RAL-88
199	chr3L	3367957	3368042	opus	110	498	16	85	'5-11	67.74	2.9	4.1	3` UTR	kst +	chr3L_16_3365001	chr3L_3365001	0.31	RAL-88
200	chr3L	3387503	3387577	Transpac	305	4922	11	74	'7-4	62.00	3.2	2.6	intergenic	not near genes	chr3L_11_3385001	chr3L_3385001	0.64	RAL-88
201	chr3L	3798578	3798627	1360	1	28	5	49	'2-3	70.72	2.7	1.4	intron	CG32264 -	chr3L_5_3795001	chr3L_3795001	0.40	RAL-88
202	chr3L	4000928	4000961	F-element	229	262	8	33	'4-4	67.04	7.0	1.0	intergenic	not near genes	chr3L_8_4000001	chr3L_4000001	0.50	RAL-88
203	chr3L	4635573	4635623	hopper	28	1412	4	50	'2-2	67.89	1.8	1.4	intron	axo -	chr3L_4_4635001	chr3L_4635001	0.50	RAL-88
204	chr3L	4712264	4712343	297	395	14	8	79	'7-1	71.17	1.8	2.9	intron	RhoGEF64C +	chr3L_8_4710001	chr3L_4710001	0.88	RAL-88
205	chr3L	4726948	4726975	roo	406	9042	8	27	'3-5	68.52	6.9	1.0	intron	RhoGEF64C +	chr3L_8_4725001	chr3L_4725001	0.38	RAL-88
206	chr3L	5205301	5205382	flea	255	4754	9	81	'3-6	68.96	2.6	2.5	intron	shep -	chr3L_9_5205001	chr3L_5205001	0.33	RAL-88
207	chr3L	5259691	5259767	blood	7016	377	7	76	'3-4	66.56	2.7	1.9	intron	shep -	chr3L_7_5255001	chr3L_5255001	0.43	RAL-88
208	chr3L	5311154	5311225	412	495	12	17	71	'11-6	61.55	4.3	3.2	intergenic	not near genes	chr3L_17_5310001	chr3L_5310001	0.65	RAL-88
209	chr3L	5355341	5355410	P-element	2886	7	17	69	'14-3	53.21	4.6	3.0	intron	lama -	chr3L_17_5355001	chr3L_5355001	0.82	RAL-88
210	chr3L	5388986	5389065	copia	258	4	13	79	'8-5	67.65	4.7	2.3	intergenic	not near genes	chr3L_13_5385001	chr3L_5385001	0.62	RAL-88
211	chr3L	5501101	5501178	opus	498	4	20	77	'13-7	66.71	5.5	3.1	3` UTR	CR44519 -	chr3L_20_5500001	chr3L_5500001	0.65	RAL-88
212	chr3L	5971678	5971747	pogo	2093	6	9	69	'6-3	65.82	2.6	2.5	intron	CG10479 -	chr3L_9_5970001	chr3L_5970001	0.67	RAL-88
213	chr3L	6024871	6024951	roo	2	409	15	80	'7-8	64.10	3.9	3.1	exon	PVRAP +	chr3L_15_6020001	chr3L_6020001	0.47	RAL-88
214	chr3L	6151904	6151979	roo	9062	8661	10	75	'3-7	64.23	1.7	3.7	intergenic	Lcp65Aa +,Acp65Aa -	chr3L_10_6150001	chr3L_6150001	0.30	RAL-88
215	chr3L	6218088	6218187	Tc3	311	241	4	99	'2-2	65.48	2.1	1.3	intergenic	LanA -	chr3L_4_6215001	chr3L_6215001	0.50	RAL-88
216	chr3L	6542834	6542904	opus	7499	8	4	70	'3-1	68.11	4.8	0.7	intron	sfl +	chr3L_4_6540001	chr3L_6540001	0.75	RAL-88
217	chr3L	6658177	6658227	hopper	23	7	10	50	'3-7	67.91	3.7	2.1	intergenic	not near genes	chr3L_10_6655001	chr3L_6655001	0.30	RAL-88
218	chr3L	6758327	6758374	pogo	2084	20	6	47	'4-2	68.60	0.0	6.0	intron	CG32392 -	chr3L_6_6755001	chr3L_6755001	0.67	RAL-88
219	chr3L	6763887	6763913	pogo	1	26	7	26	'6-1	64.25	1.5	2.8	intergenic	not near genes	chr3L_7_6760001	chr3L_6760001	0.86	RAL-88
220	chr3L	7455176	7455246	hopper	1407	1414	9	70	'4-5	65.76	3.1	2.2	intergenic	CG42458 +	chr3L_9_7455001	chr3L_7455001	0.44	RAL-88
221	chr3L	7482869	7482947	roo	405	8663	13	78	'8-5	64.57	2.5	3.7	intergenic	not near genes	chr3L_13_7480001	chr3L_7480001	0.62	RAL-88
222	chr3L	7981241	7981321	diver	226	2	13	80	'4-9	65.19	1.9	4.5	intron	nmo +	chr3L_13_7980001	chr3L_7980001	0.31	RAL-88
223	chr3L	8058976	8059038	hobo	13	2936	12	62	'4-8	60.91	2.8	3.2	intergenic	bip1 -	chr3L_12_8055001	chr3L_8055001	0.33	RAL-88
224	chr3L	8606677	8606729	I-element	13	5345	8	52	'7-1	60.44	3.6	1.7	intron	CG6282 +	chr3L_8_8605001	chr3L_8605001	0.88	RAL-88
225	chr3L	9267451	9267521	roo	9063	8664	12	70	'6-6	61.95	3.4	2.7	intron	GluRIB +	chr3L_12_9265001	chr3L_9265001	0.50	RAL-88
226	chr3L	9306929	9306973	hobo	1	2909	8	44	'6-2	63.90	2.7	2.2	intergenic	not near genes	chr3L_8_9305001	chr3L_9305001	0.75	RAL-88
227	chr3L	9442916	9442935	TAHRE	10080	10097	4	19	'2-2	62.46	5.4	0.6	intergenic	CG33926 +	chr3L_4_9440001	chr3L_9440001	0.50	RAL-88
228	chr3L	9468968	9468990	hopper	1412	24	8	22	'3-5	61.61	4.7	1.4	intron	CG44838 +	chr3L_8_9465001	chr3L_9465001	0.38	RAL-88
229	chr3L	9543157	9543228	HMS-Beagle	6797	236	14	71	'9-5	61.61	2.2	4.4	exon	Ir67a -	chr3L_14_9540001	chr3L_9540001	0.64	RAL-88
230	chr3L	9993922	9993941	jockey	4986	4967	5	19	'2-3	60.15	4.6	0.9	intron	dpr6 +	chr3L_5_9990001	chr3L_9990001	0.40	RAL-88
231	chr3L	10140959	10140974	copia	254	239	4	15	'2-2	68.66	3.9	0.8	intergenic	not near genes	chr3L_4_10140001	chr3L_10140001	0.50	RAL-88
232	chr3L	10698879	10698925	hobo	2911	1	6	46	'2-4	65.95	3.0	1.5	intergenic	not near genes	chr3L_6_10695001	chr3L_10695001	0.33	RAL-88
233	chr3L	10703735	10703755	Rt1b	5141	5122	4	20	'2-2	66.25	3.5	0.9	intergenic	not near genes	chr3L_4_10700001	chr3L_10700001	0.50	RAL-88
234	chr3L	11454335	11454376	Juan	4200	4034	4	41	'2-2	61.73	1.2	1.8	intergenic	not near genes	chr3L_4_11450001	chr3L_11450001	0.50	RAL-88
235	chr3L	11489738	11489803	1360	3386	3385	12	65	'5-7	65.93	4.4	2.2	intron	chrb +	chr3L_12_11485001	chr3L_11485001	0.42	RAL-88
236	chr3L	11661718	11661766	hopper	1409	22	6	48	'4-2	59.21	4.6	1.1	intron	CG32085 -	chr3L_6_11660001	chr3L_11660001	0.67	RAL-88
237	chr3L	11665959	11666000	jockey	4684	4970	12	41	'10-2	57.06	4.2	2.3	intron	CG32085 -	chr3L_12_11665001	chr3L_11665001	0.83	RAL-88
238	chr3L	11858535	11858601	gypsy12	7	10197	5	66	'3-2	61.66	4.9	0.8	intron	CG44837 -	chr3L_5_11855001	chr3L_11855001	0.60	RAL-88
239	chr3L	12178701	12178783	pogo	2099	1	12	82	'9-3	63.52	3.9	2.4	intron	CAH2 +	chr3L_12_12175001	chr3L_12175001	0.75	RAL-88
240	chr3L	12276168	12276240	1360	3	3385	11	72	'4-7	68.39	2.8	2.9	intron	CG4300 -	chr3L_11_12275001	chr3L_12275001	0.36	RAL-88
241	chr3L	12865303	12865377	hopper	3	1411	11	74	'4-7	62.71	1.7	4.1	intergenic	not near genes	chr3L_11_12865001	chr3L_12865001	0.36	RAL-88
242	chr3L	12880357	12880438	opus	7499	7115	16	81	'9-7	66.51	4.9	2.7	intergenic	not near genes	chr3L_16_12880001	chr3L_12880001	0.56	RAL-88
243	chr3L	12979846	12979908	copia	4874	243	6	62	'2-4	61.80	0.2	5.0	intergenic	not near genes	chr3L_6_12975001	chr3L_12975001	0.33	RAL-88
244	chr3L	12980665	12980720	copia	5	235	7	55	'6-1	63.24	1.5	2.8	intergenic	not near genes	chr3L_7_12980001	chr3L_12980001	0.86	RAL-88
245	chr3L	13160897	13160923	hopper	1384	1410	5	26	'3-2	66.02	2.4	1.5	intergenic	not near genes	chr3L_5_13160001	chr3L_13160001	0.60	RAL-88
246	chr3L	13471661	13471687	jockey	4686	4668	12	26	'6-6	58.63	4.0	2.4	intron	CG10089 -	chr3L_12_13470001	chr3L_13470001	0.50	RAL-88
247	chr3L	13646115	13646176	hobo	2938	14	12	61	'6-6	67.87	3.0	3.0	intron	bru-3 -	chr3L_12_13645001	chr3L_13645001	0.50	RAL-88
248	chr3L	13714322	13714350	flea	4755	26	10	28	'2-8	66.99	5.0	1.7	intron	bru-3 -	chr3L_10_13710001	chr3L_13710001	0.20	RAL-88
249	chr3L	13953184	13953254	297	387	6584	12	70	'5-7	63.62	3.2	2.9	intron	CG32137 +	chr3L_12_13950001	chr3L_13950001	0.42	RAL-88
250	chr3L	14235993	14236017	jockey	4700	4676	8	24	'4-4	57.15	2.9	2.1	intergenic	CG34244 -	chr3L_8_14235001	chr3L_14235001	0.50	RAL-88
251	chr3L	14385230	14385252	I-element	11	2	4	22	'3-1	58.69	0.3	3.1	intergenic	not near genes	chr3L_4_14385001	chr3L_14385001	0.75	RAL-88
252	chr3L	14779728	14779794	1360	9	3	13	66	'4-9	62.61	1.2	5.9	intron	bmm -	chr3L_13_14775001	chr3L_14775001	0.31	RAL-88
253	chr3L	15035127	15035203	pogo	2099	5	17	76	'8-9	68.61	4.2	3.3	intron	Sytbeta -	chr3L_17_15035001	chr3L_15035001	0.47	RAL-88
254	chr3L	15999312	15999332	Doc	28	8	7	20	'3-4	64.68	1.7	2.6	intron	CG5830 -	chr3L_7_15995001	chr3L_15995001	0.43	RAL-88
255	chr3L	16337646	16337732	mdg1	29	29	5	86	'3-2	68.85	2.3	1.5	intergenic	not near genes	chr3L_5_16335001	chr3L_16335001	0.60	RAL-88
256	chr3L	16368144	16368221	mdg1	7037	7454	5	77	'1-4	62.54	1.3	2.2	intergenic	CG4842 +	chr3L_5_16365001	chr3L_16365001	0.20	RAL-88
257	chr3L	16496880	16496906	jockey	22	12	9	26	'5-4	63.41	5.2	1.5	intron	CG43373 -	chr3L_9_16495001	chr3L_16495001	0.56	RAL-88
258	chr3L	16698832	16698899	pogo	13	2097	7	67	'4-3	67.64	2.8	1.8	intron,intron	Lasp -,CG43954 -	chr3L_7_16695001	chr3L_16695001	0.57	RAL-88
259	chr3L	16876490	16876551	roo	404	8679	15	61	'10-5	63.83	1.6	5.8	intron	Lmpt +	chr3L_15_16875001	chr3L_16875001	0.67	RAL-88
260	chr3L	16917799	16917883	copia	257	4866	14	84	'5-9	66.10	3.2	3.3	intron	Lmpt +	chr3L_14_16915001	chr3L_16915001	0.36	RAL-88
261	chr3L	16978704	16978768	roo	392	8664	7	64	'2-5	67.49	2.9	1.8	intron	Exn +	chr3L_7_16975001	chr3L_16975001	0.29	RAL-88
262	chr3L	17132187	17132218	jockey	421	448	13	31	'5-8	59.59	3.6	2.8	intron	Rbp6 -	chr3L_13_17130001	chr3L_17130001	0.38	RAL-88
263	chr3L	17291067	17291092	hobo	32	6	9	25	'5-4	60.42	7.5	1.1	intergenic	not near genes	chr3L_9_17290001	chr3L_17290001	0.56	RAL-88
264	chr3L	17767959	17768033	hopper	1411	1	17	74	'9-8	64.32	2.5	4.9	intergenic	not near genes	chr3L_17_17765001	chr3L_17765001	0.53	RAL-88
265	chr3L	17812036	17812090	I-element	5343	4	9	54	'3-6	67.35	0.8	5.0	intron	cln3 -	chr3L_9_17810001	chr3L_17810001	0.33	RAL-88
266	chr3L	18103748	18103818	roo	8675	411	19	70	'8-11	63.23	4.4	3.5	intron	CG13698 -	chr3L_19_18100001	chr3L_18100001	0.42	RAL-88
267	chr3L	18419366	18419426	jockey	4670	4975	13	60	'9-4	63.53	4.7	2.3	intergenic	not near genes	chr3L_13_18415001	chr3L_18415001	0.69	RAL-88
268	chr3L	18512675	18512738	mdg3	5263	5496	8	63	'5-3	65.23	4.2	1.5	intergenic	not near genes	chr3L_8_18510001	chr3L_18510001	0.62	RAL-88
269	chr3L	18597388	18597461	roo	403	8664	19	73	'12-7	64.68	5.2	3.1	intergenic	not near genes	chr3L_19_18595001	chr3L_18595001	0.63	RAL-88
270	chr3L	18635483	18635543	flea	5003	4785	12	60	'3-9	61.63	2.5	3.4	intron	MYPT-75D +	chr3L_12_18635001	chr3L_18635001	0.25	RAL-88
271	chr3L	19377020	19377084	mdg1	7037	7442	5	64	'2-3	59.73	0.5	3.3	intron	CG32206 -	chr3L_5_19375001	chr3L_19375001	0.40	RAL-88
272	chr3L	19908138	19908201	P-element	2879	2881	12	63	'3-9	46.72	4.0	2.4	intron,intron	Mi-2 -,Su(Tpl) -	chr3L_12_19905001	chr3L_19905001	0.25	RAL-88
273	chr3L	20038532	20038563	G2	2633	2664	9	31	'6-3	64.67	3.1	2.2	intergenic	not near genes	chr3L_9_20035001	chr3L_20035001	0.67	RAL-88
274	chr3L	20130251	20130328	roo	9071	8667	12	77	'7-5	65.39	3.4	2.7	exon	gig +	chr3L_12_20130001	chr3L_20130001	0.58	RAL-88
275	chr3L	20223770	20223831	1360	3373	1	8	61	'2-6	67.46	5.5	1.2	intergenic	CG17147 +	chr3L_8_20220001	chr3L_20220001	0.25	RAL-88
276	chr3L	20471869	20472074	1360	3371	5	9	205	'2-7	65.59	3.0	2.2	intron	CG32428 -	chr3L_9_20470001	chr3L_20470001	0.22	RAL-88
277	chr3L	20533643	20533712	roo	8674	408	9	69	'5-4	67.02	3.9	1.8	intron	Rcd2 -	chr3L_9_20530001	chr3L_20530001	0.56	RAL-88
278	chr3L	20887157	20887191	hobo	26	2935	4	34	'3-1	64.48	4.2	0.8	3` UTR	CR44686 -	chr3L_4_20885001	chr3L_20885001	0.75	RAL-88
279	chr3L	21094023	21094088	roo	1	393	7	65	'2-5	69.38	6.3	1.0	intron	ko -	chr3L_7_21090001	chr3L_21090001	0.29	RAL-88
280	chr3L	21983375	21983453	roo	8664	9070	10	78	'3-7	68.18	3.7	2.1	3` UTR	CG7470 +	chr3L_10_21980001	chr3L_21980001	0.30	RAL-88
281	chr3L	22094436	22094489	Transpac	27	309	11	53	'4-7	65.26	4.7	1.9	intergenic	not near genes	chr3L_11_22090001	chr3L_22090001	0.36	RAL-88
282	chr3L	22132473	22132546	roo	3	404	8	73	'5-3	63.00	2.7	2.2	intergenic	not near genes	chr3L_8_22130001	chr3L_22130001	0.62	RAL-88
283	chr3L	22492154	22492232	412	494	4	11	78	'5-6	63.57	3.3	2.6	intergenic	not near genes	chr3L_11_22490001	chr3L_22490001	0.45	RAL-88
284	chr3L	22615601	22615638	hobo	13	2914	5	37	'3-2	65.58	7.5	0.6	intron	CG14459 -	chr3L_5_22615001	chr3L_22615001	0.60	RAL-88
285	chr3L	22635689	22635759	hopper	1409	5	8	70	'3-5	62.95	7.6	0.9	intron	CG14459 -	chr3L_8_22635001	chr3L_22635001	0.38	RAL-88
286	chr3L	22752573	22752591	G-element	25	9	4	18	'2-2	57.83	3.7	0.9	intron	SPoCk +	chr3L_4_22750001	chr3L_22750001	0.50	RAL-88
287	chr3L	22848651	22848703	pogo	14	2084	4	52	'3-1	64.00	1.4	1.7	intergenic	not near genes	chr3L_4_22845001	chr3L_22845001	0.75	RAL-88
288	chr3L	23146493	23146515	1360	12	34	7	22	'4-3	65.86	7.3	0.8	intergenic	not near genes	chr3L_7_23145001	chr3L_23145001	0.57	RAL-88
289	chr3L	25162910	25162972	roo	10	9034	6	62	'4-2	67.84	3.2	1.4	intergenic	not near genes	chr3L_6_25160001	chr3L_25160001	0.67	RAL-88
290	chr3L	25272545	25272567	1360	9	31	5	22	'2-3	65.13	4.0	1.0	intron	CG40467 -	chr3L_5_25270001	chr3L_25270001	0.40	RAL-88
291	chr3L	25675949	25676010	1360	4	14	4	61	'2-2	59.88	4.3	0.8	intergenic	not near genes	chr3L_4_25675001	chr3L_25675001	0.50	RAL-88
292	chr3L	25873189	25873233	roo	8688	403	5	44	'1-4	63.32	3.4	1.1	intron	CG40178 -	chr3L_5_25870001	chr3L_25870001	0.20	RAL-88
293	chr3L	26834367	26834383	invader4	2734	2750	8	16	'5-3	53.78	6.2	1.1	intergenic	not near genes	chr3L_8_26830001	chr3L_26830001	0.62	RAL-88
294	chr3L	26870778	26870830	roo	16	397	4	52	'3-1	58.12	3.2	1.0	intergenic	not near genes	chr3L_4_26870001	chr3L_26870001	0.75	RAL-88
295	chr3L	27415230	27415282	transib2	2818	20	6	52	'3-3	67.25	4.6	1.1	intron	Dbp80 +	chr3L_6_27415001	chr3L_27415001	0.50	RAL-88
296	chr3R	723156	723181	gypsy6	78	7476	6	25	'1-5	61.25	1.6	2.3	intergenic	not near genes	chr3R_6_720001	chr3R_720001	0.17	RAL-88
297	chr3R	1977609	1977624	micropia	5433	456	4	15	'2-2	62.69	4.3	0.8	intergenic	not near genes	chr3R_4_1975001	chr3R_1975001	0.50	RAL-88
298	chr3R	2651230	2651253	flea	4786	4763	4	23	'2-2	70.00	3.6	0.9	intron	CG41056 -	chr3R_4_2650001	chr3R_2650001	0.50	RAL-88
299	chr3R	2845569	2845627	opus	7027	498	6	58	'2-4	68.67	3.5	1.3	intergenic	not near genes	chr3R_6_2845001	chr3R_2845001	0.33	RAL-88
300	chr3R	3753076	3753101	ZAM	455	430	7	25	'4-3	67.15	8.1	0.8	intergenic	not near genes	chr3R_7_3750001	chr3R_3750001	0.57	RAL-88
301	chr3R	4167986	4168047	1360	9	8	10	61	'3-7	68.16	1.2	4.5	intergenic	not near genes	chr3R_10_4165001	chr3R_4165001	0.30	RAL-88
302	chr3R	4511147	4511186	I-element	5330	6	5	39	'2-3	62.77	3.9	1.0	intron	CG34357 -	chr3R_5_4510001	chr3R_4510001	0.40	RAL-88
303	chr3R	4554318	4554388	Bari1	1693	1	4	70	'2-2	65.33	1.5	1.6	intron	CG34357 -	chr3R_4_4550001	chr3R_4550001	0.50	RAL-88
304	chr3R	4570258	4570299	Juan	16	4206	4	41	'2-2	55.86	3.0	1.0	intergenic	not near genes	chr3R_4_4570001	chr3R_4570001	0.50	RAL-88
305	chr3R	4682764	4682787	S-element	73	96	6	23	'3-3	57.27	4.9	1.0	intron	CG43427 +	chr3R_6_4680001	chr3R_4680001	0.50	RAL-88
306	chr3R	4763799	4763881	412	1	495	11	82	'4-7	66.02	5.9	1.6	intron,intron	atms +,CG44098 -	chr3R_11_4760001	chr3R_4760001	0.36	RAL-88
307	chr3R	4997083	4997149	pogo	2093	9	5	66	'4-1	60.26	4.0	1.0	intron	CG2022 -	chr3R_5_4995001	chr3R_4995001	0.80	RAL-88
308	chr3R	5147478	5147555	mdg3	247	5257	6	77	'1-5	62.50	3.8	1.2	intergenic	not near genes	chr3R_6_5145001	chr3R_5145001	0.17	RAL-88
309	chr3R	5300646	5300699	pogo	2077	4	7	53	'2-5	70.24	3.2	1.7	intron,intron	mtd -,Tim17b1 +	chr3R_7_5300001	chr3R_5300001	0.29	RAL-88
310	chr3R	5696755	5696822	roo	2	397	9	67	'7-2	67.17	4.0	1.8	intron	plx +	chr3R_9_5695001	chr3R_5695001	0.78	RAL-88
311	chr3R	5776654	5776728	HMS-Beagle	4	242	7	74	'2-5	61.63	5.7	1.0	intron	CG2082 -	chr3R_7_5775001	chr3R_5775001	0.29	RAL-88
312	chr3R	5911011	5911085	hopper	1413	5	9	74	'4-5	63.45	5.1	1.5	intron	CG34113 -	chr3R_9_5910001	chr3R_5910001	0.44	RAL-88
313	chr3R	5934519	5934580	roo	8678	403	8	61	'4-4	67.09	5.5	1.2	intron	CG34113 -	chr3R_8_5930001	chr3R_5930001	0.50	RAL-88
314	chr3R	6243308	6243372	I-element	5346	484	4	64	'2-2	64.43	7.2	0.5	intergenic	not near genes	chr3R_4_6240001	chr3R_6240001	0.50	RAL-88
315	chr3R	6721622	6721697	roo	3	406	5	75	'2-3	67.63	3.2	1.2	intron	pb -	chr3R_5_6720001	chr3R_6720001	0.40	RAL-88
316	chr3R	6725160	6725215	blood	7025	7377	7	55	'4-3	62.14	3.7	1.5	intron	pb -	chr3R_7_6725001	chr3R_6725001	0.57	RAL-88
317	chr3R	6791179	6791264	opus	499	111	8	85	'6-2	67.38	4.3	1.5	intergenic	not near genes	chr3R_8_6790001	chr3R_6790001	0.75	RAL-88
318	chr3R	6875960	6876010	roo	395	2	4	50	'2-2	55.98	2.9	1.0	intergenic	not near genes	chr3R_4_6875001	chr3R_6875001	0.50	RAL-88
319	chr3R	7360566	7360639	Transpac	4926	309	6	73	'1-5	64.17	2.5	1.7	intergenic	not near genes	chr3R_6_7360001	chr3R_7360001	0.17	RAL-88
320	chr3R	8094157	8094229	blood	2	372	12	72	'7-5	62.11	4.4	2.2	exon	CG7900 +	chr3R_12_8090001	chr3R_8090001	0.58	RAL-88
321	chr3R	8206396	8206439	I-element	5337	3	7	43	'3-4	61.52	4.5	1.3	intergenic	not near genes	chr3R_7_8205001	chr3R_8205001	0.43	RAL-88
322	chr3R	8454953	8455009	hobo	2931	12	10	56	'2-8	64.80	7.6	1.2	intron	CG45263 -	chr3R_10_8450001	chr3R_8450001	0.20	RAL-88
323	chr3R	8543286	8543348	diver	5892	213	9	62	'3-6	58.61	4.2	1.7	intergenic	not near genes	chr3R_9_8540001	chr3R_8540001	0.33	RAL-88
324	chr3R	8720037	8720113	412	495	7	7	76	'6-1	66.58	3.3	1.6	3` UTR,3` UTR	CG8116 +,CG11760 +	chr3R_7_8720001	chr3R_8720001	0.86	RAL-88
325	chr3R	8866307	8866392	roo	411	8662	8	85	'4-4	68.49	3.5	1.8	intron	pyd -	chr3R_8_8865001	chr3R_8865001	0.50	RAL-88
326	chr3R	9106185	9106257	1360	3383	3388	23	72	'14-9	62.46	4.3	4.3	intron	pum -	chr3R_23_9105001	chr3R_9105001	0.61	RAL-88
327	chr3R	9192541	9192583	invader3	5230	5458	4	42	'2-2	67.00	2.5	1.1	intron	pum -	chr3R_4_9190001	chr3R_9190001	0.50	RAL-88
328	chr3R	9312719	9312778	roo	22	410	10	59	'2-8	66.79	3.8	2.1	intron	CG8861 -	chr3R_10_9310001	chr3R_9310001	0.20	RAL-88
329	chr3R	9494575	9494656	mdg3	5256	250	16	81	'5-11	64.51	2.0	5.3	intergenic	CG8147 +	chr3R_16_9490001	chr3R_9490001	0.31	RAL-88
330	chr3R	9573738	9573814	1360	3387	3388	20	76	'8-12	67.38	5.8	2.9	intron	CG9399 -	chr3R_20_9570001	chr3R_9570001	0.40	RAL-88
331	chr3R	10428899	10428930	BS	5025	4993	10	31	'4-6	58.94	5.8	1.5	intergenic	not near genes	chr3R_10_10425001	chr3R_10425001	0.40	RAL-88
332	chr3R	10773411	10773481	1360	6	3	10	70	'5-5	61.84	2.4	2.9	intron,3` UTR,3` UTR	CG45076 -,fau -,CG45078 -	chr3R_10_10770001	chr3R_10770001	0.50	RAL-88
333	chr3R	10882436	10882508	springer	379	7142	11	72	'6-5	59.79	2.8	2.9	3` UTR	CG14696 -	chr3R_11_10880001	chr3R_10880001	0.55	RAL-88
334	chr3R	11142202	11142279	Max-element	8239	301	21	77	'10-11	59.43	3.1	5.1	intergenic	not near genes	chr3R_21_11140001	chr3R_11140001	0.48	RAL-88
335	chr3R	11164777	11164861	roo	409	8661	28	84	'16-12	62.12	4.6	5.0	exon	Ugt86Dg -	chr3R_28_11160001	chr3R_11160001	0.57	RAL-88
336	chr3R	11457325	11457387	17.6	6941	7413	6	62	'2-4	63.78	2.8	1.6	intron,intron	CG17230 +,PGRP-LB -	chr3R_6_11455001	chr3R_11455001	0.33	RAL-88
337	chr3R	11493127	11493228	297	394	6580	4	101	'2-2	71.94	2.1	1.3	intergenic	not near genes	chr3R_4_11490001	chr3R_11490001	0.50	RAL-88
338	chr3R	11552409	11552468	412	492	7074	9	59	'6-3	62.28	4.0	1.8	intergenic	not near genes	chr3R_9_11550001	chr3R_11550001	0.67	RAL-88
339	chr3R	11700279	11700324	I-element	5345	3	5	45	'4-1	60.14	4.2	1.0	intergenic	CG14718 +	chr3R_5_11700001	chr3R_11700001	0.80	RAL-88
340	chr3R	11911249	11911301	S-element	1694	1706	7	52	'2-5	63.62	1.2	3.2	intron	Cad87A -	chr3R_7_11910001	chr3R_11910001	0.29	RAL-88
341	chr3R	12047409	12047489	Stalker2	7649	7247	14	80	'8-6	61.47	3.9	2.9	intergenic	not near genes	chr3R_14_12045001	chr3R_12045001	0.57	RAL-88
342	chr3R	12134468	12134489	diver	6085	220	6	21	'4-2	61.53	0.7	3.5	intergenic	not near genes	chr3R_6_12130001	chr3R_12130001	0.67	RAL-88
343	chr3R	12199802	12199823	jockey	15	17	4	21	'3-1	63.20	5.5	0.6	intergenic	CG3809 +	chr3R_4_12195001	chr3R_12195001	0.75	RAL-88
344	chr3R	12607642	12607719	hobo	3	2709	9	77	'5-4	64.03	6.1	1.3	intergenic	not near genes	chr3R_9_12605001	chr3R_12605001	0.56	RAL-88
345	chr3R	12727546	12727623	297	392	3	4	77	'2-2	70.66	2.9	1.0	intergenic	CR44231 +	chr3R_4_12725001	chr3R_12725001	0.50	RAL-88
346	chr3R	12736669	12736732	roo	5	396	12	63	'6-6	66.14	7.0	1.5	intergenic	not near genes	chr3R_12_12735001	chr3R_12735001	0.50	RAL-88
347	chr3R	12787317	12787377	BS	5078	4736	11	60	'4-7	58.01	4.0	2.2	intergenic	not near genes	chr3R_11_12785001	chr3R_12785001	0.36	RAL-88
348	chr3R	12787366	12787387	jockey	4694	4673	4	21	'3-1	65.45	5.1	0.7	intergenic	not near genes	chr3R_4_12785001	chr3R_12785001	0.75	RAL-88
349	chr3R	12949027	12949047	Burdock	1	6157	7	20	'3-4	66.26	8.4	0.7	intergenic	not near genes	chr3R_7_12945001	chr3R_12945001	0.43	RAL-88
350	chr3R	12949445	12949498	jockey	4983	6	19	53	'8-11	60.49	8.1	2.1	intergenic	not near genes	chr3R_19_12945001	chr3R_12945001	0.42	RAL-88
351	chr3R	13450367	13450422	P-element	7	2878	4	55	'3-1	48.11	5.2	0.6	intergenic	CG14372 +	chr3R_4_13450001	chr3R_13450001	0.75	RAL-88
352	chr3R	13508882	13508942	mdg1	7039	7440	4	60	'3-1	66.78	2.7	1.1	intergenic	not near genes	chr3R_4_13505001	chr3R_13505001	0.75	RAL-88
353	chr3R	13732300	13732353	hopper	3	1390	4	53	'3-1	61.85	4.9	0.7	intron	CG34383 +	chr3R_4_13730001	chr3R_13730001	0.75	RAL-88
354	chr3R	13852452	13852513	mdg1	7445	7043	6	61	'3-3	56.83	2.3	1.8	intergenic	not near genes	chr3R_6_13850001	chr3R_13850001	0.50	RAL-88
355	chr3R	14049357	14049417	transib2	16	2819	7	60	'2-5	62.48	4.3	1.3	intergenic	not near genes	chr3R_7_14045001	chr3R_14045001	0.29	RAL-88
356	chr3R	14250553	14250626	roo	409	8	21	73	'8-13	65.86	2.0	7.0	intergenic	not near genes	chr3R_21_14250001	chr3R_14250001	0.38	RAL-88
357	chr3R	14695941	14696006	FB	11	1	15	65	'7-8	62.55	2.0	5.0	intron	Meltrin -	chr3R_15_14695001	chr3R_14695001	0.47	RAL-88
358	chr3R	14750396	14750453	roo	9058	10	9	57	'6-3	61.72	0.8	5.0	intron,intron	jvl +,smp-30 -	chr3R_9_14750001	chr3R_14750001	0.67	RAL-88
359	chr3R	14956571	14956650	pogo	4	2100	12	79	'6-6	66.79	3.4	2.7	intergenic	not near genes	chr3R_12_14955001	chr3R_14955001	0.50	RAL-88
360	chr3R	15149987	15150011	jockey	4966	4989	8	24	'4-4	65.96	2.6	2.2	intergenic	Gyc88E +	chr3R_8_15145001	chr3R_15145001	0.50	RAL-88
361	chr3R	15657281	15657359	roo	403	8661	19	78	'9-10	64.67	2.8	5.0	intergenic	not near genes	chr3R_19_15655001	chr3R_15655001	0.47	RAL-88
362	chr3R	15688519	15688569	hobo	27	2938	7	50	'5-2	66.34	3.9	1.4	3` UTR	pxb +	chr3R_7_15685001	chr3R_15685001	0.71	RAL-88
363	chr3R	15790050	15790066	flea	4729	4718	5	16	'3-2	65.19	13.5	0.3	exon	c(3)G -	chr3R_5_15790001	chr3R_15790001	0.60	RAL-88
364	chr3R	15940254	15940322	412	7544	11	17	68	'11-6	60.74	5.3	2.7	intron	Sap47 +	chr3R_17_15940001	chr3R_15940001	0.65	RAL-88
365	chr3R	16217638	16217697	pogo	2079	3	8	59	'4-4	69.88	2.0	2.7	intergenic	not near genes	chr3R_8_16215001	chr3R_16215001	0.50	RAL-88
366	chr3R	16286446	16286504	FB	7	12	12	58	'7-5	67.63	3.3	2.8	intron	gish +	chr3R_12_16285001	chr3R_16285001	0.58	RAL-88
367	chr3R	16332382	16332483	mdg3	5460	5498	5	101	'2-3	70.53	1.0	2.5	intron	Sulf1 -	chr3R_5_16330001	chr3R_16330001	0.40	RAL-88
368	chr3R	17060298	17060372	pogo	2100	9	10	74	'5-5	63.66	2.2	3.1	intron	Dad +	chr3R_10_17060001	chr3R_17060001	0.50	RAL-88
369	chr3R	17150815	17150886	hobo	2937	4	9	71	'3-6	63.21	5.7	1.3	exon	CG5285 +	chr3R_9_17150001	chr3R_17150001	0.33	RAL-88
370	chr3R	17271961	17272031	hopper	1411	1409	9	70	'4-5	69.80	2.9	2.3	intergenic	not near genes	chr3R_9_17270001	chr3R_17270001	0.44	RAL-88
371	chr3R	17309287	17309362	Max-element	301	8241	23	75	'11-12	65.02	4.1	4.5	intergenic	not near genes	chr3R_23_17305001	chr3R_17305001	0.48	RAL-88
372	chr3R	17362535	17362605	Stalker2	7640	7247	16	70	'3-13	64.22	3.2	3.8	intron	beat-IIa -	chr3R_16_17360001	chr3R_17360001	0.19	RAL-88
373	chr3R	17757833	17757900	1731	309	7	11	67	'7-4	64.84	3.5	2.4	intron	TyrR -	chr3R_11_17755001	chr3R_17755001	0.64	RAL-88
374	chr3R	17990817	17990891	roo	403	8665	18	74	'8-10	62.06	4.8	3.1	intron	cpo +	chr3R_18_17990001	chr3R_17990001	0.44	RAL-88
375	chr3R	18003167	18003239	hobo	1	2934	16	72	'13-3	61.40	4.3	3.0	intron	cpo +	chr3R_16_18000001	chr3R_18000001	0.81	RAL-88
376	chr3R	18894491	18894554	hopper	1408	1404	12	63	'4-8	65.93	1.4	5.0	intergenic	not near genes	chr3R_12_18890001	chr3R_18890001	0.33	RAL-88
377	chr3R	18937412	18937470	blood	7366	7010	12	58	'2-10	65.25	1.7	4.4	intron	CG42613 +	chr3R_12_18935001	chr3R_18935001	0.17	RAL-88
378	chr3R	19610661	19610684	mdg1	400	421	5	23	'1-4	62.99	2.9	1.3	exon	CG17752 +	chr3R_5_19610001	chr3R_19610001	0.20	RAL-88
379	chr3R	19686224	19686289	roo	396	2	14	65	'6-8	62.29	1.7	5.2	intron	Naam +	chr3R_14_19685001	chr3R_19685001	0.43	RAL-88
380	chr3R	19927728	19927803	roo	6	409	20	75	'10-10	67.61	5.2	3.2	intron	CG4459 -	chr3R_20_19925001	chr3R_19925001	0.50	RAL-88
381	chr3R	19965435	19965499	hobo	5	2930	14	64	'10-4	57.82	2.9	3.6	intron	Hs6st -	chr3R_14_19965001	chr3R_19965001	0.71	RAL-88
382	chr3R	20197581	20197648	hopper	1407	6	6	67	'2-4	63.06	2.8	1.6	intergenic	not near genes	chr3R_6_20195001	chr3R_20195001	0.33	RAL-88
383	chr3R	20414514	20414591	Stalker2	7650	7250	8	77	'2-6	62.75	4.2	1.5	intron	Gfrl -	chr3R_8_20410001	chr3R_20410001	0.25	RAL-88
384	chr3R	20730716	20730794	blood	7011	379	15	78	'10-5	61.94	4.3	2.8	intergenic	not near genes	chr3R_15_20730001	chr3R_20730001	0.67	RAL-88
385	chr3R	21011446	21011521	roo	405	8665	14	75	'7-7	69.80	6.6	1.8	intron	Calx +	chr3R_14_21010001	chr3R_21010001	0.50	RAL-88
386	chr3R	21050804	21050835	roo	2	33	7	31	'5-2	62.69	9.2	0.7	exon	CG17279 -	chr3R_7_21050001	chr3R_21050001	0.71	RAL-88
387	chr3R	21911118	21911191	roo	404	8664	12	73	'7-5	65.96	5.8	1.8	intergenic	not near genes	chr3R_12_21910001	chr3R_21910001	0.58	RAL-88
388	chr3R	21943694	21943772	pogo	2098	3	8	78	'3-5	67.83	1.3	3.5	intergenic	not near genes	chr3R_8_21940001	chr3R_21940001	0.38	RAL-88
389	chr3R	22849474	22849544	hobo	8	2709	11	70	'8-3	62.35	4.2	2.1	intergenic	not near genes	chr3R_11_22845001	chr3R_22845001	0.73	RAL-88
390	chr3R	22878495	22878570	17.6	3	7409	4	75	'3-1	58.56	1.7	1.5	intergenic	not near genes	chr3R_4_22875001	chr3R_22875001	0.75	RAL-88
391	chr3R	22930888	22930913	Max-element	8242	8248	11	25	'6-5	58.79	1.2	5.0	intron	klg +	chr3R_11_22930001	chr3R_22930001	0.55	RAL-88
392	chr3R	23079572	23079638	mdg1	7051	7459	5	66	'3-2	64.69	3.4	1.1	intron	CG13830 -	chr3R_5_23075001	chr3R_23075001	0.60	RAL-88
393	chr3R	23242566	23242612	hopper	4	1384	7	46	'4-3	60.48	4.1	1.4	intron	CG4467 -	chr3R_7_23240001	chr3R_23240001	0.57	RAL-88
394	chr3R	23607456	23607538	Transpac	4918	5228	6	82	'3-3	67.69	2.0	2.0	intron	CG31145 -	chr3R_6_23605001	chr3R_23605001	0.50	RAL-88
395	chr3R	23627636	23627661	Juan	7	32	8	25	'2-6	60.96	3.4	1.8	intron	CG31145 -	chr3R_8_23625001	chr3R_23625001	0.25	RAL-88
396	chr3R	23833661	23833731	mdg1	7459	7048	6	70	'4-2	67.27	2.4	1.8	intron	CG34355 +	chr3R_6_23830001	chr3R_23830001	0.67	RAL-88
397	chr3R	23887326	23887403	Tirant	4	400	15	77	'5-10	66.13	5.1	2.5	intron	Pli -	chr3R_15_23885001	chr3R_23885001	0.33	RAL-88
398	chr3R	24565808	24565895	Tirant	8106	401	21	87	'9-12	65.07	3.3	4.9	intron	CG13624 -	chr3R_21_24565001	chr3R_24565001	0.43	RAL-88
399	chr3R	25714674	25714720	hobo	18	2925	6	46	'2-4	60.28	4.3	1.1	intron	LpR2 -	chr3R_6_25710001	chr3R_25710001	0.33	RAL-88
400	chr3R	25809144	25809197	mdg1	7039	7434	12	53	'9-3	65.86	5.3	1.9	intergenic	CR45652 +	chr3R_12_25805001	chr3R_25805001	0.75	RAL-88
401	chr3R	25858584	25858645	jockey	4987	10	11	61	'3-8	60.25	5.9	1.6	intron	CG5890 +	chr3R_11_25855001	chr3R_25855001	0.27	RAL-88
402	chr3R	26202564	26202616	mdg1	402	7047	5	52	'2-3	66.03	2.8	1.3	intron	CR44320 +	chr3R_5_26200001	chr3R_26200001	0.40	RAL-88
403	chr3R	26242549	26242627	diver	5890	226	15	78	'4-11	63.71	1.8	5.4	intron	CR42745 +	chr3R_15_26240001	chr3R_26240001	0.27	RAL-88
404	chr3R	26264880	26264941	hobo	15	2938	13	61	'9-4	67.04	1.8	4.6	intron	CG6154 +	chr3R_13_26260001	chr3R_26260001	0.69	RAL-88
405	chr3R	26340880	26340956	412	6	494	16	76	'6-10	62.37	3.5	3.6	intron	CG33970 +	chr3R_16_26340001	chr3R_26340001	0.38	RAL-88
406	chr3R	26759434	26759455	hobo	2928	2923	7	21	'3-4	59.28	3.8	1.5	intergenic	not near genes	chr3R_7_26755001	chr3R_26755001	0.43	RAL-88
407	chr3R	26763279	26763308	hobo	26	2	11	29	'6-5	68.97	0.9	5.8	intergenic	not near genes	chr3R_11_26760001	chr3R_26760001	0.55	RAL-88
408	chr3R	26806112	26806179	roo	8	403	22	67	'12-10	65.82	5.2	3.5	intron	Tl +	chr3R_22_26805001	chr3R_26805001	0.55	RAL-88
409	chr3R	27597185	27597262	Transpac	2	308	17	77	'8-9	62.45	4.8	2.9	intergenic	dsd -	chr3R_17_27595001	chr3R_27595001	0.47	RAL-88
410	chr3R	27663826	27663850	jockey	4987	4963	5	24	'4-1	58.54	4.1	1.0	intron	unc80 +	chr3R_5_27660001	chr3R_27660001	0.80	RAL-88
411	chr3R	27760977	27761052	412	6	494	21	75	'8-13	61.76	4.1	4.1	intergenic	not near genes	chr3R_21_27760001	chr3R_27760001	0.38	RAL-88
412	chr3R	27885754	27885780	Doc	27	3	8	26	'7-1	60.56	4.3	1.5	intron	CG34353 -	chr3R_8_27885001	chr3R_27885001	0.88	RAL-88
413	chr3R	28076898	28076955	hobo	17	2935	17	57	'6-11	66.34	5.2	2.7	intron	CG34362 +	chr3R_17_28075001	chr3R_28075001	0.35	RAL-88
414	chr3R	28627845	28627920	Transpac	5227	4922	7	75	'5-2	69.31	2.1	2.3	intron	CG10011 -	chr3R_7_28625001	chr3R_28625001	0.71	RAL-88
415	chr3R	28970775	28970865	Dm88	4382	4382	5	90	'1-4	76.00	3.3	1.2	5` UTR	CR45669 +	chr3R_5_28970001	chr3R_28970001	0.20	RAL-88
416	chr3R	29456594	29456621	hopper	1414	1388	6	27	'4-2	62.85	3.0	1.5	intron	Ptp99A +	chr3R_6_29455001	chr3R_29455001	0.67	RAL-88
417	chr3R	30753912	30753987	412	9	496	18	75	'5-13	65.33	3.7	3.8	intergenic	not near genes	chr3R_18_30750001	chr3R_30750001	0.28	RAL-88
418	chr3R	31130797	31130863	roo	8675	405	5	66	'2-3	62.82	1.5	2.0	intergenic	CG15556 -	chr3R_5_31130001	chr3R_31130001	0.40	RAL-88
419	chr3R	31157355	31157404	mdg1	7452	7063	7	49	'6-1	62.09	3.5	1.6	intron	Gycbeta100B +	chr3R_7_31155001	chr3R_31155001	0.86	RAL-88
420	chr3R	31288913	31288985	mdg1	7042	7457	7	72	'1-6	70.29	3.8	1.5	intergenic	not near genes	chr3R_7_31285001	chr3R_31285001	0.14	RAL-88
421	chr3R	31662087	31662111	springer	7522	360	5	24	'2-3	64.06	6.1	0.7	3` UTR	kek6 +	chr3R_5_31660001	chr3R_31660001	0.40	RAL-88
422	chr3R	31872113	31872184	mdg1	6	7455	14	71	'6-8	64.90	2.4	4.1	intron	heph -	chr3R_14_31870001	chr3R_31870001	0.43	RAL-88
423	chr3R	31953383	31953460	roo	8666	9070	19	77	'10-9	69.14	4.3	3.6	intron	heph -	chr3R_19_31950001	chr3R_31950001	0.53	RAL-88
424	chr3R	32062169	32062241	pogo	2100	10	6	72	'3-3	72.45	0.6	3.8	intron	Map205 -	chr3R_6_32060001	chr3R_32060001	0.50	RAL-88
425	chr4	311206	311236	1360	3	3356	8	30	'3-5	69.41	1.7	3.0	3` UTR	Zip102B -	chr4_8_310001	chr4_310001	0.38	RAL-88
426	chr4	311561	311580	1360	31	11	4	19	'2-2	63.72	1.1	1.9	3` UTR	Zip102B -	chr4_4_310001	chr4_310001	0.50	RAL-88
427	chrX	289680	289732	I-element	11	5343	5	52	'4-1	63.20	3.0	1.2	intron,intron	CG3777 +,CG13375 -	chrX_5_285001	chrX_285001	0.80	RAL-88
428	chrX	326836	326910	roo	10	413	15	74	'7-8	66.23	3.1	3.7	intron,intron	CG3777 +,CG32816 -	chrX_15_325001	chrX_325001	0.47	RAL-88
429	chrX	451542	451595	Transpac	311	30	6	53	'4-2	69.42	2.4	1.8	intron	CG32816 -	chrX_6_450001	chrX_450001	0.67	RAL-88
430	chrX	523580	523655	P-element	1	1	12	75	'7-5	54.79	2.8	3.2	intron	arg +	chrX_12_520001	chrX_520001	0.58	RAL-88
431	chrX	1518023	1518074	blood	7016	7364	11	51	'8-3	64.74	3.2	2.6	intergenic	inc +	chrX_11_1515001	chrX_1515001	0.73	RAL-88
432	chrX	1618909	1618958	P-element	12	2873	11	49	'8-3	44.71	5.0	1.8	intron,intron	Mur2B -,br +	chrX_11_1615001	chrX_1615001	0.73	RAL-88
433	chrX	1963395	1963476	roo	8661	406	9	81	'4-5	66.52	3.6	2.0	intron	Hr4 +	chrX_9_1960001	chrX_1960001	0.44	RAL-88
434	chrX	2012160	2012198	P-element	9	2858	6	38	'4-2	42.18	2.7	1.6	intergenic	east +	chrX_6_2010001	chrX_2010001	0.67	RAL-88
435	chrX	2745155	2745223	FB	7	1	11	68	'5-6	64.06	2.5	3.1	intron	kirre +	chrX_11_2745001	chrX_2745001	0.45	RAL-88
436	chrX	2838111	2838142	jockey	5	34	14	31	'4-10	61.62	6.1	2.0	intron	kirre +	chrX_14_2835001	chrX_2835001	0.29	RAL-88
437	chrX	3010912	3010969	hobo	18	2937	11	57	'4-7	64.98	1.7	4.1	intron	kirre +	chrX_11_3010001	chrX_3010001	0.36	RAL-88
438	chrX	3586203	3586280	roo	2	408	16	77	'6-10	65.37	3.0	4.0	intron	AstA-R1 +	chrX_16_3585001	chrX_3585001	0.38	RAL-88
439	chrX	4292457	4292513	hopper	17	1411	6	56	'1-5	63.76	4.4	1.1	intergenic	not near genes	chrX_6_4290001	chrX_4290001	0.17	RAL-88
440	chrX	4744334	4744383	roo	8692	405	7	49	'2-5	74.48	1.5	2.8	intergenic	not near genes	chrX_7_4740001	chrX_4740001	0.29	RAL-88
441	chrX	4791433	4791476	hopper	34	3	8	43	'2-6	63.52	3.0	2.0	intergenic	not near genes	chrX_8_4790001	chrX_4790001	0.25	RAL-88
442	chrX	5473595	5473664	I-element	10	5332	7	69	'6-1	60.51	1.8	2.5	intron	SPR +	chrX_7_5470001	chrX_5470001	0.86	RAL-88
443	chrX	5599716	5599786	hopper	1413	1407	10	70	'6-4	66.66	1.8	3.6	intron	Vsx1 +	chrX_10_5595001	chrX_5595001	0.60	RAL-88
444	chrX	6378316	6378365	hobo	14	2935	13	49	'7-6	67.50	1.7	4.8	intergenic	not near genes	chrX_13_6375001	chrX_6375001	0.54	RAL-88
445	chrX	7976887	7976917	roo	32	8665	10	30	'7-3	67.05	2.3	3.0	intron	sn +	chrX_10_7975001	chrX_7975001	0.70	RAL-88
446	chrX	7990503	7990531	Doc	30	4	7	28	'5-2	65.16	2.6	1.9	intergenic	not near genes	chrX_7_7990001	chrX_7990001	0.71	RAL-88
447	chrX	8876961	8876993	jockey	4666	4698	9	32	'5-4	64.59	2.7	2.4	intron	Moe -	chrX_9_8875001	chrX_8875001	0.56	RAL-88
448	chrX	8972946	8973004	opus	17	7494	4	58	'1-3	60.94	3.3	0.9	intron,3` UTR,3` UTR	rdgA +,CG10962 -,CR43836 -	chrX_4_8970001	chrX_8970001	0.25	RAL-88
449	chrX	9438230	9438248	jockey	5	23	4	18	'3-1	61.33	4.8	0.7	intron	mgl -	chrX_4_9435001	chrX_9435001	0.75	RAL-88
450	chrX	9576524	9576595	FB	1	4	14	71	'7-7	67.61	1.9	4.8	intron	CG32699 -	chrX_14_9575001	chrX_9575001	0.50	RAL-88
451	chrX	9847599	9847625	roo	403	9041	5	26	'4-1	63.04	2.1	1.6	intron	CG32698 +	chrX_5_9845001	chrX_9845001	0.80	RAL-88
452	chrX	9913634	9913650	jockey	30	14	4	16	'2-2	60.47	3.8	0.8	intergenic	not near genes	chrX_4_9910001	chrX_9910001	0.50	RAL-88
453	chrX	10338311	10338330	flea	4756	4775	4	19	'1-3	67.34	5.4	0.6	intron	CG43740 +	chrX_4_10335001	chrX_10335001	0.25	RAL-88
454	chrX	10567870	10567942	roo	9	411	7	72	'1-6	62.32	2.8	1.8	intron	spri -	chrX_7_10565001	chrX_10565001	0.14	RAL-88
455	chrX	10582751	10582821	P-element	1	2	9	70	'4-5	54.80	4.5	1.6	intron	spri -	chrX_9_10580001	chrX_10580001	0.44	RAL-88
456	chrX	10650067	10650144	Burdock	6135	6385	5	77	'4-1	68.39	2.4	1.5	intron	X11Lbeta +	chrX_5_10650001	chrX_10650001	0.80	RAL-88
457	chrX	11431285	11431312	F-element	21	18	4	27	'3-1	64.99	6.3	0.5	3` UTR	Evi5 -	chrX_4_11430001	chrX_11430001	0.75	RAL-88
458	chrX	11820848	11820930	Tirant	401	8111	16	82	'7-9	64.72	3.4	3.6	intron	rudhira +	chrX_16_11820001	chrX_11820001	0.44	RAL-88
459	chrX	12138746	12138799	FB	21	3	6	53	'2-4	64.69	1.0	3.0	intron	Ten-a +	chrX_6_12135001	chrX_12135001	0.33	RAL-88
460	chrX	12157744	12157822	Tirant	8112	399	8	78	'4-4	67.28	2.2	2.5	intron	Ten-a +	chrX_8_12155001	chrX_12155001	0.50	RAL-88
461	chrX	12272627	12272700	copia	1	249	7	73	'4-3	66.81	1.4	2.9	intron	Ten-a +	chrX_7_12270001	chrX_12270001	0.57	RAL-88
462	chrX	12752207	12752279	P-element	2883	2885	6	72	'3-3	53.25	4.1	1.2	5` UTR	CR44619 +	chrX_6_12750001	chrX_12750001	0.50	RAL-88
463	chrX	12866583	12866601	roo	9038	394	7	18	'2-5	62.40	2.2	2.2	intron	Pde9 -	chrX_7_12865001	chrX_12865001	0.29	RAL-88
464	chrX	13029200	13029263	roo	8668	395	12	63	'6-6	64.51	3.0	3.0	intron	rad +	chrX_12_13025001	chrX_13025001	0.50	RAL-88
465	chrX	13277619	13277694	Burdock	6386	6138	9	75	'4-5	66.88	2.3	2.7	intron	HDAC4 -	chrX_9_13275001	chrX_13275001	0.44	RAL-88
466	chrX	13635017	13635067	S-element	1694	1705	6	50	'4-2	71.23	2.1	1.9	intron	NFAT +	chrX_6_13635001	chrX_13635001	0.67	RAL-88
467	chrX	14141094	14141153	17.6	6945	7414	9	59	'4-5	66.66	2.4	2.6	intergenic	not near genes	chrX_9_14140001	chrX_14140001	0.44	RAL-88
468	chrX	14186828	14186847	roo	8661	17	5	19	'3-2	64.10	2.9	1.3	intergenic	CG12481 +	chrX_5_14185001	chrX_14185001	0.60	RAL-88
469	chrX	14338313	14338337	Stalker4	412	392	6	24	'4-2	65.78	5.7	0.9	intron	dpr8 +	chrX_6_14335001	chrX_14335001	0.67	RAL-88
470	chrX	14985003	14985049	roo	398	8683	6	46	'4-2	64.38	2.2	1.9	intron	eag +	chrX_6_14985001	chrX_14985001	0.67	RAL-88
471	chrX	15172483	15172554	297	6587	6970	4	71	'3-1	66.67	1.8	1.4	intergenic	not near genes	chrX_4_15170001	chrX_15170001	0.75	RAL-88
472	chrX	15228749	15228795	I-element	5335	6	7	46	'3-4	63.62	0.4	5.0	3` UTR	CG9101 -	chrX_7_15225001	chrX_15225001	0.43	RAL-88
473	chrX	15253776	15253815	diver	195	10	5	39	'2-3	65.68	3.6	1.1	intergenic	not near genes	chrX_5_15250001	chrX_15250001	0.40	RAL-88
474	chrX	15334261	15334337	diver	223	5889	14	76	'8-6	63.92	2.7	3.8	intron	HDAC6 +	chrX_14_15330001	chrX_15330001	0.57	RAL-88
475	chrX	15841164	15841185	INE-1	151	171	6	21	'3-3	59.97	3.4	1.4	intergenic	CG8565 +	chrX_6_15840001	chrX_15840001	0.50	RAL-88
476	chrX	16646941	16647010	Tirant	397	8110	10	69	'5-5	68.92	4.9	1.7	intron	mthl1 +	chrX_10_16645001	chrX_16645001	0.50	RAL-88
477	chrX	16676076	16676127	I-element	288	5349	4	51	'2-2	57.33	2.0	1.3	intron	CG13012 -	chrX_4_16675001	chrX_16675001	0.50	RAL-88
478	chrX	16987501	16987545	roo	8678	9049	5	44	'3-2	66.79	3.1	1.2	intron	CG45002 -	chrX_5_16985001	chrX_16985001	0.60	RAL-88
479	chrX	17837973	17838025	S-element	1707	1697	5	52	'4-1	60.85	3.8	1.0	intron	CG6398 +	chrX_5_17835001	chrX_17835001	0.80	RAL-88
480	chrX	17839198	17839266	412	7546	13	4	68	'3-1	66.33	1.8	1.4	intron	CG6398 +	chrX_4_17835001	chrX_17835001	0.75	RAL-88
481	chrX	18125371	18125443	hobo	8	2709	10	72	'5-5	63.03	2.7	2.7	exon	CG32553 -	chrX_10_18125001	chrX_18125001	0.50	RAL-88
482	chrX	18193727	18193798	hopper	7	1413	4	71	'1-3	66.11	3.4	0.9	intron	Frq2 +	chrX_4_18190001	chrX_18190001	0.25	RAL-88
483	chrX	18403261	18403326	roo	9064	8672	5	65	'2-3	61.48	0.7	2.9	intron	CG32549 -	chrX_5_18400001	chrX_18400001	0.40	RAL-88
484	chrX	18471165	18471200	Juan	4187	4084	6	35	'1-5	57.56	4.7	1.1	intron	CG32547 -	chrX_6_18470001	chrX_18470001	0.17	RAL-88
485	chrX	18491238	18491308	Bari1	1697	5	6	70	'2-4	64.61	2.4	1.8	3` UTR	CG15044 -	chrX_6_18490001	chrX_18490001	0.33	RAL-88
486	chrX	18730527	18730578	hobo	14	2927	6	51	'2-4	64.02	4.5	1.1	3` UTR	CR45512 -	chrX_6_18730001	chrX_18730001	0.33	RAL-88
487	chrX	18981828	18981891	412	494	18	8	63	'5-3	64.05	4.5	1.5	intron	CG43759 +	chrX_8_18980001	chrX_18980001	0.62	RAL-88
488	chrX	19069369	19069444	roo	8663	403	11	75	'10-1	67.11	1.4	4.6	intergenic	CG34330 -	chrX_11_19065001	chrX_19065001	0.91	RAL-88
489	chrX	19350328	19350359	roo	409	9041	7	31	'2-5	69.29	6.1	1.0	intergenic	not near genes	chrX_7_19350001	chrX_19350001	0.29	RAL-88
490	chrX	19673589	19673612	diver	5856	5833	14	23	'6-8	56.96	7.5	1.6	intron	et -	chrX_14_19670001	chrX_19670001	0.43	RAL-88
491	chrX	19887086	19887137	P-element	2885	10	12	51	'8-4	46.53	3.0	3.0	intron,exon	Hers +,amn -	chrX_12_19885001	chrX_19885001	0.67	RAL-88
492	chrX	19980510	19980562	Burdock	13	6376	4	52	'2-2	61.22	2.0	1.3	intergenic	not near genes	chrX_4_19980001	chrX_19980001	0.50	RAL-88
493	chrX	20044502	20044578	1360	1	3387	11	76	'8-3	68.42	1.8	3.9	intron	Dop2R -	chrX_11_20040001	chrX_20040001	0.73	RAL-88
494	chrX	20106332	20106356	hopper	7	1386	6	24	'3-3	58.70	3.2	1.4	intergenic	not near genes	chrX_6_20105001	chrX_20105001	0.50	RAL-88
495	chrX	20762225	20762448	roo	408	57	12	223	'11-1	63.98	1.5	4.8	3` UTR	shakB -	chrX_12_20760001	chrX_20760001	0.92	RAL-88
496	chrX	20999536	20999568	BS	5073	1	5	32	'1-4	61.84	1.4	2.1	intergenic	not near genes	chrX_5_20995001	chrX_20995001	0.20	RAL-88
497	chrX	21087586	21087631	mdg3	5254	245	8	45	'6-2	61.57	1.1	3.8	intergenic	not near genes	chrX_8_21085001	chrX_21085001	0.75	RAL-88
498	chrX	21175369	21175386	Gypsy12A_LTR	2215	2232	6	17	'2-4	61.57	3.0	1.5	intergenic	not near genes	chrX_6_21175001	chrX_21175001	0.33	RAL-88
499	chrX	21183308	21183378	S-element	7	7	11	70	'6-5	63.18	1.6	4.2	intergenic	not near genes	chrX_11_21180001	chrX_21180001	0.55	RAL-88
500	chrX	21375613	21375679	pogo	3	2089	7	66	'3-4	65.03	3.9	1.4	intron	slgA +	chrX_7_21375001	chrX_21375001	0.43	RAL-88
501	chrX	21399400	21399464	pogo	3	2098	15	64	'6-9	69.47	2.1	4.8	intergenic	not near genes	chrX_15_21395001	chrX_21395001	0.40	RAL-88
502	chrX	22000015	22000046	gtwin	477	7369	6	31	'4-2	62.14	0.0	6.0	intergenic	not near genes	chrX_6_22000001	chrX_22000001	0.67	RAL-88
503	chrX	22643980	22644052	pogo	2	2099	8	72	'4-4	64.39	1.7	3.0	intergenic	not near genes	chrX_8_22640001	chrX_22640001	0.50	RAL-88
504	chrX	23073857	23073923	pogo	2098	15	7	66	'6-1	66.20	1.9	2.4	intron	CG17167 +	chrX_7_23070001	chrX_23070001	0.86	RAL-88
505	chrY	986885	986902	HeT-A	5649	5811	4	17	'1-3	67.90	0.0	4.0	intergenic	not near genes	chrY_4_985001	chrY_985001	0.25	RAL-88