SV#	Chr_5p	Chr_coord_5p_start	Chr_coord_5p_end	Chr_3p	Chr_coord_3p_start	Chr_coord_3p_end	repName	Reads_collapsed	avg_del_len	RefGen_3prime	Refgen_5prime	RefGen_Avg	Coverage_Ratio	size	Chr_5p	Chr_coord_5p	classification_5p	comment_5p	Chr_mid	Chr_coord_mid	classification_mid	comment_mid	Chr_3p	Chr_coord_3p	classification_3p	comment_3p	depletion_code	loci_code	libname
2	chr2L	47444	47458	chr2L	52569	52583	jockey	4	5125	14.5	9.5	12.0	0.3	5139	chr2L	47444	intron	Cda5 -	chr2L	50014	intron	Cda5 -	chr2L	52583	intron	Cda5 -	chr2L_4_50001	chr2L_50001	RAL-887
3	chr2L	47463	47479	chr2L	52564	52603	jockey	4	5118	11.0	8.5	9.8	0.4	5140	chr2L	47463	intron	Cda5 -	chr2L	50033	intron	Cda5 -	chr2L	52603	intron	Cda5 -	chr2L_4_50001	chr2L_50001	RAL-887
12	chr2L	347873	347919	chr2L	355384	355393	blood	17	7510	4.5	1.5	3.0	4.2	7520	chr2L	347873	3` UTR	Plc21C +	chr2L	351633	intron	Plc21C +	chr2L	355393	3` UTR	Plc21C +	chr2L_17_350001	chr2L_350001	RAL-887
15	chr2L	686929	686946	chr2L	695957	696006	roo	8	9053	4.0	4.0	4.0	1.6	9077	chr2L	686929	intron	ds -	chr2L	691468	intron	ds -	chr2L	696006	intron	ds -	chr2L_8_690001	chr2L_690001	RAL-887
17	chr2L	770447	770489	chr2L	772247	772273	Bari1	11	1795	2.0	4.0	3.0	2.8	1826	chr2L	770447	intergenic	not near genes	chr2L	771360	intergenic	not near genes	chr2L	772273	intergenic	CR44614 +	chr2L_11_770001	chr2L_770001	RAL-887
24	chr2L	996714	996745	chr2L	1005829	1005860	roo	5	9115	0.0	4.0	2.0	1.7	9146	chr2L	996714	intergenic	not near genes	chr2L	1001287	intergenic	not near genes	chr2L	1005860	intergenic	not near genes	chr2L_5_1000001	chr2L_1000001	RAL-887
31	chr2L	1220110	1220162	chr2L	1227596	1227642	blood	15	7484	1.5	2.5	2.0	5.0	7532	chr2L	1220110	intron	CG42329 +	chr2L	1223876	intron	CG42329 +	chr2L	1227642	intron	CG42329 +	chr2L_15_1220001	chr2L_1220001	RAL-887
37	chr2L	1570681	1570689	chr2L	1573573	1573581	F-element	4	2891	9.0	6.5	7.8	0.5	2900	chr2L	1570681	intron	haf +	chr2L	1572131	intron	haf +	chr2L	1573581	intron	haf +	chr2L_4_1570001	chr2L_1570001	RAL-887
38	chr2L	1570696	1570717	chr2L	1573557	1573609	F-element	4	2884	4.5	3.0	3.8	0.8	2913	chr2L	1570696	intron	haf +	chr2L	1572152	intron	haf +	chr2L	1573609	intron	haf +	chr2L_4_1570001	chr2L_1570001	RAL-887
41	chr2L	1678941	1679004	chr2L	1686444	1686489	blood	4	7494	0.0	4.5	2.2	1.2	7548	chr2L	1678941	intron	chinmo +	chr2L	1682715	intron	chinmo +	chr2L	1686489	intron	chinmo +	chr2L_4_1680001	chr2L_1680001	RAL-887
42	chr2L	1711344	1711386	chr2L	1711687	1711703	mdg3	11	339	3.0	6.5	4.8	1.9	359	chr2L	1711344	3` UTR,3` UTR	mRpL48 +,frtz -	chr2L	1711524	3` UTR	frtz -	chr2L	1711703	3` UTR	frtz -	chr2L_11_1710001	chr2L_1710001	RAL-887
51	chr2L	2100376	2100405	chr2L	2109543	2109571	roo	8	9164	6.0	7.5	6.8	1.0	9195	chr2L	2100376	intron	dpr3 -	chr2L	2104974	intron	dpr3 -	chr2L	2109571	intron	dpr3 -	chr2L_8_2100001	chr2L_2100001	RAL-887
52	chr2L	2112114	2112145	chr2L	2119773	2119811	opus	7	7666	0.5	1.5	1.0	3.5	7697	chr2L	2112114	intergenic	not near genes	chr2L	2115962	intergenic	not near genes	chr2L	2119811	intergenic	not near genes	chr2L_7_2115001	chr2L_2115001	RAL-887
64	chr2L	2565542	2565570	chr2L	2571629	2571655	297	4	6085	4.5	6.0	5.2	0.6	6113	chr2L	2565542	exon	Cyp309a2 -	chr2L	2568598	intron	Cyp309a2 -	chr2L	2571655	exon	Cyp309a2 -	chr2L_4_2565001	chr2L_2565001	RAL-887
68	chr2L	2661219	2661231	chr2L	2663031	2663057	I-element	8	1826	2.5	1.5	2.0	2.7	1838	chr2L	2661219	intergenic	not near genes	chr2L	2662138	intergenic	not near genes	chr2L	2663057	intergenic	not near genes	chr2L_8_2660001	chr2L_2660001	RAL-887
79	chr2L	3073015	3073033	chr2L	3078238	3078247	copia	8	5222	6.5	6.5	6.5	1.1	5232	chr2L	3073015	intron	toc -	chr2L	3075631	intron	toc -	chr2L	3078247	intron	toc -	chr2L_8_3075001	chr2L_3075001	RAL-887
80	chr2L	3073035	3073047	chr2L	3078236	3078270	copia	5	5218	5.0	6.5	5.8	0.7	5235	chr2L	3073035	intron	toc -	chr2L	3075652	intron	toc -	chr2L	3078270	intron	toc -	chr2L_5_3075001	chr2L_3075001	RAL-887
86	chr2L	3202746	3202765	chr2L	3210170	3210210	mdg1	8	7443	3.0	3.5	3.2	1.9	7464	chr2L	3202746	intergenic	not near genes	chr2L	3206478	intergenic	not near genes	chr2L	3210210	intergenic	CR45336 +	chr2L_8_3205001	chr2L_3205001	RAL-887
88	chr2L	3251471	3251489	chr2L	3259083	3259104	springer	6	7615	4.0	8.0	6.0	0.9	7633	chr2L	3251471	intergenic	not near genes	chr2L	3255288	intergenic	not near genes	chr2L	3259104	intergenic	not near genes	chr2L_6_3255001	chr2L_3255001	RAL-887
92	chr2L	3388600	3388625	chr2L	3388851	3388886	pogo	5	257	4.0	4.0	4.0	1.0	286	chr2L	3388600	intergenic	CG42460 -	chr2L	3388743	intergenic	CG42460 -	chr2L	3388886	intergenic	CG42460 -,CR44791 +	chr2L_5_3385001	chr2L_3385001	RAL-887
98	chr2L	3649787	3649791	chr2L	3655010	3655014	copia	4	5222	6.0	7.5	6.8	0.5	5227	chr2L	3649787	intron	for -	chr2L	3652400	intron	for -	chr2L	3655014	intron	for -	chr2L_4_3650001	chr2L_3650001	RAL-887
99	chr2L	3649798	3649813	chr2L	3654990	3655036	copia	8	5215	4.0	4.5	4.2	1.5	5238	chr2L	3649798	intron	for -	chr2L	3652417	intron	for -	chr2L	3655036	intron	for -	chr2L_8_3650001	chr2L_3650001	RAL-887
108	chr2L	4066031	4066057	chr2L	4068872	4068902	Juan	5	2842	5.5	2.0	3.8	1.0	2871	chr2L	4066031	intron	ed +	chr2L	4067466	intron	ed +	chr2L	4068902	intron	ed +	chr2L_5_4065001	chr2L_4065001	RAL-887
110	chr2L	4181294	4181304	chr2L	4183946	4183949	Burdock	4	2650	5.0	9.5	7.2	0.5	2655	chr2L	4181294	intergenic	not near genes	chr2L	4182622	intergenic	not near genes	chr2L	4183949	intergenic	not near genes	chr2L_4_4180001	chr2L_4180001	RAL-887
113	chr2L	4601683	4601732	chr2L	4609144	4609192	mdg1	13	7456	4.5	6.0	5.2	2.1	7509	chr2L	4601683	intron	dp -	chr2L	4605438	intron	dp -	chr2L	4609192	intron	dp -	chr2L_13_4605001	chr2L_4605001	RAL-887
114	chr2L	4661826	4661855	chr2L	4669426	4669455	opus	6	7596	3.0	4.0	3.5	1.3	7629	chr2L	4661826	intergenic	not near genes	chr2L	4665640	intergenic	not near genes	chr2L	4669455	intergenic	not near genes	chr2L_6_4665001	chr2L_4665001	RAL-887
120	chr2L	4918148	4918193	chr2L	4923241	4923252	jockey	5	5086	1.0	2.0	1.5	2.0	5104	chr2L	4918148	intron	hoe1 -	chr2L	4920700	intron	hoe1 -	chr2L	4923252	intron	hoe1 -	chr2L_5_4920001	chr2L_4920001	RAL-887
121	chr2L	4953492	4953529	chr2L	4953753	4953753	pogo	8	251	3.5	1.0	2.2	2.5	261	chr2L	4953492	intergenic	Jon25Bii -	chr2L	4953622	intergenic	Jon25Bii -	chr2L	4953753	intergenic	not near genes	chr2L_8_4950001	chr2L_4950001	RAL-887
132	chr2L	5342754	5342794	chr2L	5345154	5345194	Doc	11	2395	4.5	4.0	4.2	2.1	2440	chr2L	5342754	intergenic	not near genes	chr2L	5343974	intergenic	not near genes	chr2L	5345194	intergenic	not near genes	chr2L_11_5340001	chr2L_5340001	RAL-887
141	chr2L	5827716	5827741	chr2L	5836718	5836769	roo	10	9018	2.5	4.5	3.5	2.2	9053	chr2L	5827716	intron	TrissinR +	chr2L	5832242	intron	TrissinR +	chr2L	5836769	intron	TrissinR +	chr2L_10_5830001	chr2L_5830001	RAL-887
155	chr2L	6363160	6363175	chr2L	6366080	6366100	Burdock	5	2934	5.0	2.0	3.5	1.1	2940	chr2L	6363160	intergenic	not near genes	chr2L	6364630	intergenic	not near genes	chr2L	6366100	intergenic	not near genes	chr2L_5_6360001	chr2L_6360001	RAL-887
156	chr2L	6426838	6426888	chr2L	6445118	6445150	roo	25	18272	6.0	5.0	5.5	3.8	18312	chr2L	6426838	3` UTR	CG9527 -	chr2L	6435994	intron	CG9527 -	chr2L	6445150	exon	CG9527 -	chr2L_25_6435001	chr2L_6435001	RAL-887
164	chr2L	6876758	6876809	chr2L	6882969	6883015	diver	9	6201	5.0	2.5	3.8	1.9	6257	chr2L	6876758	intron	Nlg2 +	chr2L	6879886	intron	Nlg2 +	chr2L	6883015	intron	Nlg2 +	chr2L_9_6875001	chr2L_6875001	RAL-887
176	chr2L	7343320	7343335	chr2L	7350456	7350471	roo	6	7135	7.5	5.5	6.5	0.8	7151	chr2L	7343320	intron	Wnt6 +	chr2L	7346896	intron	Wnt6 +	chr2L	7350471	intron	Wnt6 +	chr2L_6_7345001	chr2L_7345001	RAL-887
177	chr2L	7343339	7343353	chr2L	7350447	7350489	roo	4	7128	3.5	3.0	3.2	1.0	7150	chr2L	7343339	intron	Wnt6 +	chr2L	7346914	intron	Wnt6 +	chr2L	7350489	intron	Wnt6 +	chr2L_4_7345001	chr2L_7345001	RAL-887
190	chr2L	7959022	7959061	chr2L	7960453	7960457	pogo	11	1425	8.5	0.0	4.2	2.1	1435	chr2L	7959022	intron	Snoo -	chr2L	7959740	intron	Snoo -	chr2L	7960457	intron	Snoo -	chr2L_11_7955001	chr2L_7955001	RAL-887
191	chr2L	7977074	7977085	chr2L	7984067	7984080	297	4	6994	6.5	3.0	4.8	0.7	7006	chr2L	7977074	intron	Snoo -	chr2L	7980577	intron	Snoo -	chr2L	7984080	intron,5` UTR	Snoo -,CG7231 +	chr2L_4_7980001	chr2L_7980001	RAL-887
192	chr2L	7977091	7977109	chr2L	7984066	7984105	297	5	6991	3.0	3.0	3.0	1.2	7014	chr2L	7977091	intron	Snoo -	chr2L	7980598	intron	Snoo -	chr2L	7984105	intron,5` UTR	Snoo -,CG7231 +	chr2L_5_7980001	chr2L_7980001	RAL-887
193	chr2L	8018821	8018838	chr2L	8023625	8023642	Doc	6	4804	0.0	5.0	2.5	1.7	4821	chr2L	8018821	intron	Tg +	chr2L	8021232	intron	Tg +	chr2L	8023642	intron	Tg +	chr2L_6_8020001	chr2L_8020001	RAL-887
203	chr2L	8452404	8452451	chr2L	8461595	8461642	roo	10	9190	4.0	7.5	5.8	1.5	9238	chr2L	8452404	intron	fu12 -	chr2L	8457023	intron	fu12 -	chr2L	8461642	intron	fu12 -	chr2L_10_8455001	chr2L_8455001	RAL-887
207	chr2L	8723100	8723146	chr2L	8731492	8731543	Tirant	20	8392	1.5	1.5	1.5	8.0	8443	chr2L	8723100	intron	raw -	chr2L	8727322	intron	raw -	chr2L	8731543	intron	raw -	chr2L_20_8725001	chr2L_8725001	RAL-887
215	chr2L	9000266	9000310	chr2L	9007795	9007819	roo	14	7526	7.5	6.5	7.0	1.8	7553	chr2L	9000266	intergenic	Try29F +	chr2L	9004042	intergenic	not near genes	chr2L	9007819	intergenic	not near genes	chr2L_14_9000001	chr2L_9000001	RAL-887
228	chr2L	9393483	9393528	chr2L	9396470	9396481	jockey	13	2984	0.5	4.5	2.5	3.7	2998	chr2L	9393483	intron	Shawl -	chr2L	9394982	intron	Shawl -	chr2L	9396481	intron	Shawl -	chr2L_13_9390001	chr2L_9390001	RAL-887
237	chr2L	9973726	9973759	chr2L	9980847	9980898	HMS-Beagle	12	7132	0.5	8.5	4.5	2.2	7172	chr2L	9973726	intergenic	not near genes	chr2L	9977312	intergenic	not near genes	chr2L	9980898	intergenic	not near genes	chr2L_12_9975001	chr2L_9975001	RAL-887
240	chr2L	10156306	10156354	chr2L	10163796	10163836	blood	13	7482	6.5	5.0	5.8	1.9	7530	chr2L	10156306	intron,3` UTR	CG44153 -,CG4839 +	chr2L	10160071	intron	CG44153 -	chr2L	10163836	intron	CG44153 -	chr2L_13_10160001	chr2L_10160001	RAL-887
249	chr2L	10592821	10592865	chr2L	10600503	10600505	opus	13	7675	0.5	3.0	1.8	4.6	7684	chr2L	10592821	intron	Trim9 +	chr2L	10596663	intron	Trim9 +	chr2L	10600505	intron	Trim9 +	chr2L_13_10595001	chr2L_10595001	RAL-887
254	chr2L	10862841	10862874	chr2L	10864462	10864508	Rt1c	10	1627	3.0	7.0	5.0	1.7	1667	chr2L	10862841	3` UTR	CR43807 -	chr2L	10863674	intron	CR43807 -	chr2L	10864508	3` UTR	CR43807 -	chr2L_10_10860001	chr2L_10860001	RAL-887
256	chr2L	10946956	10946977	chr2L	10956163	10956190	roo	6	9223	2.5	7.0	4.8	1.0	9234	chr2L	10946956	intron	dpr2 -	chr2L	10951573	intron	dpr2 -	chr2L	10956190	intron	dpr2 -	chr2L_6_10950001	chr2L_10950001	RAL-887
270	chr2L	11540588	11540610	chr2L	11548010	11548032	Tabor	6	7422	2.0	5.5	3.8	1.2	7444	chr2L	11540588	intergenic	not near genes	chr2L	11544310	intergenic	not near genes	chr2L	11548032	intergenic	not near genes	chr2L_6_11540001	chr2L_11540001	RAL-887
271	chr2L	11563637	11563670	chr2L	11568846	11568863	copia	7	5211	4.5	4.0	4.2	1.3	5226	chr2L	11563637	intergenic	not near genes	chr2L	11566250	intergenic	not near genes	chr2L	11568863	intergenic	not near genes	chr2L_7_11565001	chr2L_11565001	RAL-887
276	chr2L	11713511	11713538	chr2L	11720979	11721017	blood	12	7480	6.5	4.0	5.2	1.9	7506	chr2L	11713511	intergenic	not near genes	chr2L	11717264	intergenic	not near genes	chr2L	11721017	intergenic	CR44143 +	chr2L_12_11715001	chr2L_11715001	RAL-887
284	chr2L	12067336	12067354	chr2L	12074380	12074426	297	5	7066	0.5	3.5	2.0	1.7	7090	chr2L	12067336	intergenic	not near genes	chr2L	12070881	intergenic	not near genes	chr2L	12074426	intergenic	not near genes	chr2L_5_12070001	chr2L_12070001	RAL-887
297	chr2L	12558307	12558352	chr2L	12565456	12565487	HMS-Beagle	10	7146	2.0	3.0	2.5	2.9	7180	chr2L	12558307	intergenic	not near genes	chr2L	12561897	intergenic	not near genes	chr2L	12565487	intergenic	not near genes	chr2L_10_12560001	chr2L_12560001	RAL-887
302	chr2L	12728903	12728949	chr2L	12729162	12729208	pogo	11	255	2.5	2.0	2.2	3.4	305	chr2L	12728903	intron	MRP +	chr2L	12729056	intron	MRP +	chr2L	12729208	exon	MRP +	chr2L_11_12725001	chr2L_12725001	RAL-887
303	chr2L	12731039	12731088	chr2L	12735826	12735828	F-element	7	4780	1.5	3.5	2.5	2.0	4789	chr2L	12731039	intron	MRP +	chr2L	12733434	intron	MRP +	chr2L	12735828	intron	MRP +	chr2L_7_12730001	chr2L_12730001	RAL-887
304	chr2L	12739163	12739175	chr2L	12743961	12743976	Doc	4	4800	4.5	6.0	5.2	0.6	4813	chr2L	12739163	exon	MRP +	chr2L	12741570	intron	MRP +	chr2L	12743976	intron	MRP +	chr2L_4_12740001	chr2L_12740001	RAL-887
305	chr2L	12739184	12739203	chr2L	12743953	12743955	Doc	6	4783	2.0	4.0	3.0	1.5	4771	chr2L	12739184	exon	MRP +	chr2L	12741570	intron	MRP +	chr2L	12743955	intron	MRP +	chr2L_6_12740001	chr2L_12740001	RAL-887
308	chr2L	12763808	12763868	chr2L	12764040	12764067	BS	4	217	1.0	0.5	0.8	2.2	259	chr2L	12763808	intergenic	not near genes	chr2L	12763938	intergenic	not near genes	chr2L	12764067	intergenic	not near genes	chr2L_4_12760001	chr2L_12760001	RAL-887
309	chr2L	12781782	12781813	chr2L	12789251	12789283	Quasimodo	9	7469	10.0	7.0	8.5	0.9	7501	chr2L	12781782	intergenic	not near genes	chr2L	12785532	intergenic	not near genes	chr2L	12789283	intergenic	not near genes	chr2L_9_12785001	chr2L_12785001	RAL-887
310	chr2L	12791587	12791626	chr2L	12795282	12795283	F-element	4	3684	4.5	1.0	2.8	1.1	3696	chr2L	12791587	intergenic	not near genes	chr2L	12793435	intergenic	not near genes	chr2L	12795283	intergenic	not near genes	chr2L_4_12790001	chr2L_12790001	RAL-887
311	chr2L	12791627	12791635	chr2L	12795276	12795294	F-element	5	3668	3.0	0.5	1.8	1.8	3667	chr2L	12791627	intergenic	not near genes	chr2L	12793460	intergenic	not near genes	chr2L	12795294	intergenic	not near genes	chr2L_5_12790001	chr2L_12790001	RAL-887
313	chr2L	12861675	12861720	chr2L	12863162	12863183	hobo	13	1484	5.0	4.0	4.5	2.4	1508	chr2L	12861675	intergenic	not near genes	chr2L	12862429	intergenic	not near genes	chr2L	12863183	intergenic	not near genes	chr2L_13_12860001	chr2L_12860001	RAL-887
315	chr2L	12933838	12933876	chr2L	12941324	12941332	blood	13	7479	5.0	5.5	5.2	2.1	7494	chr2L	12933838	intergenic	not near genes	chr2L	12937585	intergenic	not near genes	chr2L	12941332	intergenic	not near genes	chr2L_13_12935001	chr2L_12935001	RAL-887
317	chr2L	13036222	13036274	chr2L	13036484	13036527	X-element	6	256	5.5	3.5	4.5	1.1	305	chr2L	13036222	intron	CG9932 -	chr2L	13036374	intron	CG9932 -	chr2L	13036527	intron	CG9932 -	chr2L_6_13035001	chr2L_13035001	RAL-887
324	chr2L	13405634	13405677	chr2L	13410451	13410459	Doc	11	4812	2.0	7.5	4.8	1.9	4825	chr2L	13405634	exon	CG7110 +	chr2L	13408046	intron	CG7110 +	chr2L	13410459	intron	CG7110 +	chr2L_11_13405001	chr2L_13405001	RAL-887
326	chr2L	13449475	13449490	chr2L	13456901	13456942	Quasimodo	4	7448	3.0	5.0	4.0	0.8	7467	chr2L	13449475	intron,5` UTR	CG42784 +,Hsp60D -	chr2L	13453208	intron	CG42784 +	chr2L	13456942	intron	CG42784 +	chr2L_4_13450001	chr2L_13450001	RAL-887
327	chr2L	13481441	13481472	chr2L	13482056	13482069	jockey	10	621	5.5	5.5	5.5	1.5	628	chr2L	13481441	intron	CG42784 +	chr2L	13481755	intron	CG42784 +	chr2L	13482069	intron	CG42784 +	chr2L_10_13480001	chr2L_13480001	RAL-887
328	chr2L	13522115	13522148	chr2L	13527653	13527686	Transpac	7	5534	1.5	2.5	2.0	2.3	5571	chr2L	13522115	intron	B4 -	chr2L	13524900	intron	B4 -	chr2L	13527686	intron	B4 -	chr2L_7_13520001	chr2L_13520001	RAL-887
340	chr2L	13761811	13761821	chr2L	13762917	13762952	Doc	4	1124	5.5	8.0	6.8	0.5	1141	chr2L	13761811	intron	TM9SF4 +	chr2L	13762382	intron	TM9SF4 +	chr2L	13762952	intron	TM9SF4 +	chr2L_4_13760001	chr2L_13760001	RAL-887
341	chr2L	13853089	13853118	chr2L	13862257	13862280	roo	8	9167	3.0	5.0	4.0	1.6	9191	chr2L	13853089	intron	CenG1A +	chr2L	13857684	intron	CenG1A +	chr2L	13862280	intron	CenG1A +	chr2L_8_13855001	chr2L_13855001	RAL-887
362	chr2L	14889941	14889983	chr2L	14890385	14890425	jockey	7	443	3.5	6.0	4.8	1.2	484	chr2L	14889941	intergenic	not near genes	chr2L	14890183	intergenic	not near genes	chr2L	14890425	intergenic	not near genes	chr2L_7_14890001	chr2L_14890001	RAL-887
363	chr2L	14984369	14984404	chr2L	14991989	14992026	opus	9	7620	4.0	5.5	4.8	1.6	7657	chr2L	14984369	intron	mol -	chr2L	14988198	intron	mol -	chr2L	14992026	intron	mol -	chr2L_9_14985001	chr2L_14985001	RAL-887
372	chr2L	15446035	15446078	chr2L	15453524	15453536	blood	11	7484	3.0	0.5	1.8	3.9	7501	chr2L	15446035	intergenic	not near genes	chr2L	15449786	intergenic	not near genes	chr2L	15453536	intergenic	not near genes	chr2L_11_15445001	chr2L_15445001	RAL-887
376	chr2L	15586395	15586438	chr2L	15593466	15593510	297	8	7072	1.5	3.0	2.2	2.5	7115	chr2L	15586395	intergenic	not near genes	chr2L	15589952	intergenic	not near genes	chr2L	15593510	intergenic	not near genes	chr2L_8_15585001	chr2L_15585001	RAL-887
388	chr2L	15956005	15956038	chr2L	15957491	15957522	hobo	10	1482	9.5	2.5	6.0	1.4	1517	chr2L	15956005	intron	beat-Ib -	chr2L	15956764	intron	beat-Ib -	chr2L	15957522	intron	beat-Ib -	chr2L_10_15955001	chr2L_15955001	RAL-887
392	chr2L	16071771	16071771	chr2L	16217659	16217661	copia	37	145889	22.5	27.0	24.8	1.4	145890	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217661	intergenic	not near genes	chr2L_37_16140001	chr2L_16140001	RAL-887
393	chr2L	16141148	16141180	chr2L	16146388	16146407	copia	5	5230	0.0	3.0	1.5	2.0	5259	chr2L	16141148	intergenic	not near genes	chr2L	16143778	intergenic	not near genes	chr2L	16146407	intergenic	not near genes	chr2L_5_16140001	chr2L_16140001	RAL-887
394	chr2L	16141181	16141195	chr2L	16146378	16146422	copia	6	5217	0.0	2.0	1.0	3.0	5241	chr2L	16141181	intergenic	not near genes	chr2L	16143802	intergenic	not near genes	chr2L	16146422	intergenic	not near genes	chr2L_6_16140001	chr2L_16140001	RAL-887
396	chr2L	16153723	16153746	chr2L	16160811	16160832	297	8	7087	7.0	6.0	6.5	1.1	7109	chr2L	16153723	intergenic	not near genes	chr2L	16157278	intergenic	not near genes	chr2L	16160832	intergenic	not near genes	chr2L_8_16155001	chr2L_16155001	RAL-887
399	chr2L	16071770	16071771	chr2L	16217660	16217660	copia	18	145889	22.5	27.5	25.0	0.7	145890	chr2L	16071770	intron	beat-Ia +	chr2L	16144715	intergenic	not near genes	chr2L	16217660	intergenic	not near genes	chr2L_18_16140001	chr2L_16140001	RAL-887
405	chr2L	16280272	16280285	chr2L	16281426	16281476	1360	9	1172	3.0	4.0	3.5	2.0	1204	chr2L	16280272	intron	crp -	chr2L	16280874	intron	crp -	chr2L	16281476	intron	crp -	chr2L_9_16280001	chr2L_16280001	RAL-887
421	chr2L	16958087	16958135	chr2L	16962895	16962931	Doc	10	4805	0.5	3.5	2.0	3.3	4844	chr2L	16958087	intergenic	not near genes	chr2L	16960509	intergenic	not near genes	chr2L	16962931	intergenic	not near genes	chr2L_10_16960001	chr2L_16960001	RAL-887
427	chr2L	17199158	17199187	chr2L	17200644	17200664	hobo	8	1485	5.0	1.0	3.0	2.0	1506	chr2L	17199158	intron	beat-IIIc -	chr2L	17199911	intron	beat-IIIc -	chr2L	17200664	intron	beat-IIIc -	chr2L_8_17195001	chr2L_17195001	RAL-887
430	chr2L	17273177	17273196	chr2L	17277979	17277999	F-element	4	4799	7.5	7.5	7.5	0.5	4822	chr2L	17273177	intergenic	not near genes	chr2L	17275588	intergenic	not near genes	chr2L	17277999	intergenic	not near genes	chr2L_4_17275001	chr2L_17275001	RAL-887
431	chr2L	17273197	17273231	chr2L	17277975	17277992	F-element	9	4784	2.5	7.0	4.8	1.6	4795	chr2L	17273197	intergenic	not near genes	chr2L	17275594	intergenic	not near genes	chr2L	17277992	intergenic	not near genes	chr2L_9_17275001	chr2L_17275001	RAL-887
434	chr2L	17432008	17432048	chr2L	17432135	17432174	1360	7	124	0.0	4.5	2.2	2.2	166	chr2L	17432008	intron	Dif -	chr2L	17432091	intron	Dif -	chr2L	17432174	intron	Dif -	chr2L_7_17430001	chr2L_17430001	RAL-887
435	chr2L	17687498	17687518	chr2L	17692263	17692283	F-element	9	4763	3.0	2.5	2.8	2.4	4785	chr2L	17687498	intron	CadN -	chr2L	17689890	intron	CadN -	chr2L	17692283	intron	CadN -	chr2L_9_17685001	chr2L_17685001	RAL-887
444	chr2L	17951941	17951977	chr2L	17953428	17953463	hobo	13	1486	4.5	3.0	3.8	2.7	1522	chr2L	17951941	intergenic	CR44398 -,CR44397 -	chr2L	17952702	intergenic	not near genes	chr2L	17953463	intergenic	not near genes	chr2L_13_17950001	chr2L_17950001	RAL-887
470	chr2L	19147287	19147398	chr2L	19154403	19154449	297	11	7072	0.0	1.0	0.5	7.3	7162	chr2L	19147287	intron	brat +	chr2L	19150868	intron	brat +	chr2L	19154449	intron	brat +	chr2L_11_19150001	chr2L_19150001	RAL-887
478	chr2L	19345017	19345043	chr2L	19357231	19357241	blood	8	12219	6.0	7.5	6.8	1.0	12224	chr2L	19345017	intron	dnt -	chr2L	19351129	intron	dnt -	chr2L	19357241	intron	dnt -	chr2L_8_19350001	chr2L_19350001	RAL-887
488	chr2L	19620076	19620126	chr2L	19621085	19621135	jockey	15	1001	5.0	4.0	4.5	2.7	1059	chr2L	19620076	intron	Lar +	chr2L	19620606	intron	Lar +	chr2L	19621135	intron	Lar +	chr2L_15_19620001	chr2L_19620001	RAL-887
489	chr2L	19652553	19652596	chr2L	19674007	19674050	opus	12	21453	4.5	2.5	3.5	2.7	21497	chr2L	19652553	intron	Lar +	chr2L	19663302	intron	Lar +	chr2L	19674050	intron	Lar +	chr2L_12_19660001	chr2L_19660001	RAL-887
491	chr2L	19703521	19703545	chr2L	19712676	19712697	roo	7	9155	9.5	7.0	8.2	0.8	9176	chr2L	19703521	intron	Lar +	chr2L	19708109	intron	Lar +	chr2L	19712697	intron	Lar +	chr2L_7_19705001	chr2L_19705001	RAL-887
492	chr2L	19703548	19703566	chr2L	19712674	19712713	roo	8	9150	4.5	6.5	5.5	1.2	9165	chr2L	19703548	intron	Lar +	chr2L	19708130	intron	Lar +	chr2L	19712713	intron	Lar +	chr2L_8_19705001	chr2L_19705001	RAL-887
494	chr2L	19737353	19737380	chr2L	19740824	19740850	1360	6	3473	4.5	4.5	4.5	1.1	3497	chr2L	19737353	intergenic	Nf-YB +	chr2L	19739102	intergenic	not near genes	chr2L	19740850	intergenic	not near genes	chr2L_6_19735001	chr2L_19735001	RAL-887
495	chr2L	19762791	19762829	chr2L	19763053	19763061	pogo	4	254	5.0	2.0	3.5	0.9	270	chr2L	19762791	5` UTR	fbp -	chr2L	19762926	intron	fbp -	chr2L	19763061	intron	fbp -	chr2L_4_19760001	chr2L_19760001	RAL-887
503	chr2L	20005881	20005889	chr2L	20010962	20010985	flea	5	5092	4.5	2.5	3.5	1.1	5104	chr2L	20005881	intron	CG43861 -	chr2L	20008433	intron	CG43861 -	chr2L	20010985	intron	CG43861 -	chr2L_5_20005001	chr2L_20005001	RAL-887
511	chr2L	20272096	20272140	chr2L	20282827	20282871	copia	15	10729	6.5	6.0	6.2	2.1	10775	chr2L	20272096	intergenic	not near genes	chr2L	20277484	intergenic	not near genes	chr2L	20282871	intergenic	not near genes	chr2L_15_20275001	chr2L_20275001	RAL-887
517	chr2L	20568647	20568685	chr2L	20569056	20569092	X-element	10	408	2.0	1.0	1.5	4.0	445	chr2L	20568647	intron	CR45347 +	chr2L	20568870	intron	CR45347 +	chr2L	20569092	intron	CR45347 +	chr2L_10_20565001	chr2L_20565001	RAL-887
518	chr2L	20576202	20576220	chr2L	20583690	20583705	blood	6	7486	8.0	6.0	7.0	0.8	7503	chr2L	20576202	intergenic	CR45347 +	chr2L	20579954	intergenic	not near genes	chr2L	20583705	3` UTR	CR44909 -	chr2L_6_20575001	chr2L_20575001	RAL-887
519	chr2L	20576221	20576252	chr2L	20583687	20583715	blood	13	7477	3.0	6.0	4.5	2.4	7494	chr2L	20576221	intergenic	not near genes	chr2L	20579968	intergenic	not near genes	chr2L	20583715	3` UTR	CR44909 -	chr2L_13_20575001	chr2L_20575001	RAL-887
530	chr2L	20976633	20976679	chr2L	20981467	20981508	X-element	19	4831	2.5	2.5	2.5	5.4	4875	chr2L	20976633	intron	CG42238 -	chr2L	20979070	intron	CG42238 -	chr2L	20981508	intron	CG42238 -	chr2L_19_20975001	chr2L_20975001	RAL-887
533	chr2L	21020266	21020276	chr2L	21023963	21023973	NOF	4	3696	6.5	3.0	4.8	0.7	3707	chr2L	21020266	intron	CG42238 -	chr2L	21022120	intron	CG42238 -	chr2L	21023973	intron	CG42238 -	chr2L_4_21020001	chr2L_21020001	RAL-887
534	chr2L	21020286	21020299	chr2L	21023958	21023995	NOF	5	3685	6.0	3.0	4.5	0.9	3709	chr2L	21020286	intron	CG42238 -	chr2L	21022140	intron	CG42238 -	chr2L	21023995	intron	CG42238 -	chr2L_5_21020001	chr2L_21020001	RAL-887
535	chr2L	21041118	21041165	chr2L	21049394	21049446	Tirant	12	8272	3.5	3.5	3.5	2.7	8328	chr2L	21041118	intron	CG42238 -	chr2L	21045282	intron	CG42238 -	chr2L	21049446	intron	CG42238 -	chr2L_12_21045001	chr2L_21045001	RAL-887
544	chr2L	21597024	21597045	chr2L	21604788	21604803	roo	6	7761	4.5	5.0	4.8	1.0	7779	chr2L	21597024	intergenic	not near genes	chr2L	21600914	intergenic	not near genes	chr2L	21604803	intergenic	not near genes	chr2L_6_21600001	chr2L_21600001	RAL-887
545	chr2L	21653188	21653221	chr2L	21656504	21656545	invader4	6	3322	3.0	2.5	2.8	1.6	3357	chr2L	21653188	intergenic	not near genes	chr2L	21654866	intergenic	not near genes	chr2L	21656545	intergenic	not near genes	chr2L_6_21650001	chr2L_21650001	RAL-887
549	chr2L	21981666	21981713	chr2L	21990850	21990881	roo	17	9176	4.0	5.5	4.8	2.9	9215	chr2L	21981666	exon	CG2528 -	chr2L	21986274	intron	CG2528 -	chr2L	21990881	exon	CG2528 -	chr2L_17_21985001	chr2L_21985001	RAL-887
560	chr2L	22548930	22548943	chr2L	22550138	22550153	1360	6	1228	0.0	6.0	3.0	1.5	1223	chr2L	22548930	intergenic	CG17490 +	chr2L	22549542	intergenic	not near genes	chr2L	22550153	intergenic	CG17493 +	chr2L_6_22545001	chr2L_22545001	RAL-887
561	chr2L	22581949	22581987	chr2L	22583758	22583796	S-element	6	1808	4.0	1.5	2.8	1.6	1847	chr2L	22581949	intron	CG17494 +	chr2L	22582872	intron	CG17494 +	chr2L	22583796	intron	CG17494 +	chr2L_6_22580001	chr2L_22580001	RAL-887
564	chr2L	22679809	22679819	chr2L	22684592	22684608	F-element	6	4787	10.5	18.0	14.2	0.4	4799	chr2L	22679809	intron	CG40006 -	chr2L	22682208	intron	CG40006 -	chr2L	22684608	intron	CG40006 -	chr2L_6_22680001	chr2L_22680001	RAL-887
568	chr2L	22776401	22776444	chr2L	22778210	22778253	S-element	6	1809	3.0	1.0	2.0	2.0	1852	chr2L	22776401	intergenic	not near genes	chr2L	22777327	intergenic	not near genes	chr2L	22778253	intergenic	not near genes	chr2L_6_22775001	chr2L_22775001	RAL-887
572	chr2R	529316	529354	chr2R	537958	537987	Max-element	9	8641	3.0	4.5	3.8	1.9	8671	chr2R	529316	intron	CG40378 +	chr2R	533652	intron	CG40378 +	chr2R	537987	intron	CG40378 +	chr2R_9_530001	chr2R_530001	RAL-887
576	chr2R	1516591	1516600	chr2R	1521333	1521348	1731	6	4746	10.5	3.5	7.0	0.8	4757	chr2R	1516591	exon	Maf1 -	chr2R	1518970	intron	Maf1 -	chr2R	1521348	5` UTR	Maf1 -	chr2R_6_1515001	chr2R_1515001	RAL-887
580	chr2R	2498971	2499013	chr2R	2508138	2508179	roo	9	9165	4.0	3.0	3.5	2.0	9208	chr2R	2498971	intron	MFS17 -	chr2R	2503575	intron	MFS17 -	chr2R	2508179	intron	MFS17 -	chr2R_9_2500001	chr2R_2500001	RAL-887
582	chr2R	1373048	1373065	chr2R	2589327	2589344	Cr1a	4	1216279	12.0	6.5	9.2	0.4	1216296	chr2R	1373048	intron	l(2)41Ab +	chr2R	1981196	intron	CG17684 -	chr2R	2589344	intergenic	not near genes	chr2R_4_1980001	chr2R_1980001	RAL-887
586	chr2R	3532608	3532636	chr2R	3536071	3536099	Doc	4	3463	1.5	3.0	2.2	1.2	3491	chr2R	3532608	intergenic	not near genes	chr2R	3534354	intergenic	not near genes	chr2R	3536099	intergenic	not near genes	chr2R_4_3530001	chr2R_3530001	RAL-887
589	chr2R	4622958	4622976	chr2R	4624113	4624155	1360	7	1170	5.0	7.5	6.2	1.0	1197	chr2R	4622958	intergenic	CR44101 -	chr2R	4623556	intergenic	not near genes	chr2R	4624155	intergenic	not near genes	chr2R_7_4620001	chr2R_4620001	RAL-887
600	chr2R	5417984	5418017	chr2R	5420634	5420669	Burdock	7	2647	3.0	6.0	4.5	1.3	2685	chr2R	5417984	intron	laccase2 +	chr2R	5419326	intron	laccase2 +	chr2R	5420669	intron	laccase2 +	chr2R_7_5415001	chr2R_5415001	RAL-887
608	chr2R	5869257	5869303	chr2R	5874351	5874399	flea	21	5094	2.0	4.5	3.2	5.0	5142	chr2R	5869257	intergenic	not near genes	chr2R	5871828	intergenic	not near genes	chr2R	5874399	intergenic	not near genes	chr2R_21_5870001	chr2R_5870001	RAL-887
611	chr2R	5902153	5902191	chr2R	5909714	5909734	17.6	5	7563	1.5	1.5	1.5	2.0	7581	chr2R	5902153	intron	CG43366 +	chr2R	5905944	intron	CG43366 +	chr2R	5909734	intron	CG43366 +	chr2R_5_5905001	chr2R_5905001	RAL-887
617	chr2R	6494532	6494551	chr2R	6499314	6499332	F-element	4	4782	1.5	2.0	1.8	1.4	4800	chr2R	6494532	intergenic	not near genes	chr2R	6496932	intergenic	not near genes	chr2R	6499332	intergenic	not near genes	chr2R_4_6495001	chr2R_6495001	RAL-887
620	chr2R	6579783	6579791	chr2R	6584890	6584898	flea	4	5106	5.0	3.0	4.0	0.8	5115	chr2R	6579783	intron	jing +	chr2R	6582340	intron	jing +	chr2R	6584898	intron	jing +	chr2R_4_6580001	chr2R_6580001	RAL-887
624	chr2R	6952165	6952183	chr2R	6959774	6959792	opus	4	7610	4.5	3.0	3.8	0.8	7627	chr2R	6952165	intron,intron	mim -,CheB42c -	chr2R	6955978	intron,intron	mim -,CheB42c -	chr2R	6959792	intron,intron	mim -,CheB42c -	chr2R_4_6955001	chr2R_6955001	RAL-887
630	chr2R	7196555	7196594	chr2R	7201350	7201389	F-element	6	4795	3.0	3.0	3.0	1.5	4834	chr2R	7196555	intron	pk +	chr2R	7198972	intron	pk +	chr2R	7201389	intron	pk +	chr2R_6_7195001	chr2R_7195001	RAL-887
632	chr2R	7235831	7235850	chr2R	7240914	7240939	jockey	7	5096	4.5	3.0	3.8	1.5	5108	chr2R	7235831	intergenic	not near genes	chr2R	7238385	intergenic	not near genes	chr2R	7240939	intergenic	not near genes	chr2R_7_7235001	chr2R_7235001	RAL-887
638	chr2R	7608390	7608419	chr2R	7613613	7613619	I-element	7	5219	6.5	0.0	3.2	1.7	5229	chr2R	7608390	intron	CG1358 -	chr2R	7611004	intron	CG1358 -	chr2R	7613619	intron	CG1358 -	chr2R_7_7610001	chr2R_7610001	RAL-887
643	chr2R	7815653	7815700	chr2R	7822140	7822189	Burdock	9	6488	7.0	3.5	5.2	1.5	6536	chr2R	7815653	intergenic	CG1882 +	chr2R	7818921	intergenic	not near genes	chr2R	7822189	3` UTR	cathD -	chr2R_9_7815001	chr2R_7815001	RAL-887
644	chr2R	7869173	7869202	chr2R	7873976	7873998	Doc	7	4803	8.0	3.0	5.5	1.1	4825	chr2R	7869173	intron	Dgk -	chr2R	7871586	intron	Dgk -	chr2R	7873998	intron	Dgk -	chr2R_7_7870001	chr2R_7870001	RAL-887
645	chr2R	7869203	7869220	chr2R	7873971	7873999	Doc	6	4794	5.5	2.5	4.0	1.2	4796	chr2R	7869203	intron	Dgk -	chr2R	7871601	intron	Dgk -	chr2R	7873999	intron	Dgk -	chr2R_6_7870001	chr2R_7870001	RAL-887
652	chr2R	8160914	8160948	chr2R	8161024	8161049	1360	9	107	4.5	8.5	6.5	1.2	135	chr2R	8160914	exon	CG8708 -	chr2R	8160982	intron	CG8708 -	chr2R	8161049	intron	CG8708 -	chr2R_9_8160001	chr2R_8160001	RAL-887
655	chr2R	8398201	8398230	chr2R	8402991	8403029	Doc	9	4792	6.5	2.5	4.5	1.6	4828	chr2R	8398201	intron	CG2121 -	chr2R	8400615	intron	CG2121 -	chr2R	8403029	intron	CG2121 -	chr2R_9_8400001	chr2R_8400001	RAL-887
658	chr2R	8722760	8722794	chr2R	8723004	8723040	pogo	10	253	3.5	3.0	3.2	2.4	280	chr2R	8722760	intron	CG14767 -	chr2R	8722900	intron	CG14767 -	chr2R	8723040	intron	CG14767 -	chr2R_10_8720001	chr2R_8720001	RAL-887
666	chr2R	9151285	9151324	chr2R	9157775	9157814	Burdock	13	6489	8.5	6.0	7.2	1.6	6529	chr2R	9151285	exon	CG30345 +	chr2R	9154550	intergenic	not near genes	chr2R	9157814	intergenic	CG8008 -	chr2R_13_9150001	chr2R_9150001	RAL-887
670	chr2R	9212683	9212691	chr2R	9213189	9213197	roo	5	505	11.5	6.5	9.0	0.5	514	chr2R	9212683	intergenic	CR45309 +	chr2R	9212940	intergenic	CR45309 +	chr2R	9213197	5` UTR	CR45309 +	chr2R_5_9210001	chr2R_9210001	RAL-887
671	chr2R	9212693	9212725	chr2R	9213177	9213199	roo	6	492	5.0	5.5	5.2	1.0	506	chr2R	9212693	intergenic	CR45309 +	chr2R	9212946	intergenic	CR45309 +	chr2R	9213199	5` UTR	CR45309 +	chr2R_6_9210001	chr2R_9210001	RAL-887
675	chr2R	9480056	9480098	chr2R	9490607	9490648	roo	4	10550	3.5	1.5	2.5	1.1	10592	chr2R	9480056	intergenic	not near genes	chr2R	9485352	intergenic	not near genes	chr2R	9490648	intergenic	not near genes	chr2R_4_9485001	chr2R_9485001	RAL-887
691	chr2R	9945423	9945448	chr2R	9945631	9945646	BS	9	208	10.5	6.5	8.5	0.9	223	chr2R	9945423	intron	Mef2 -	chr2R	9945534	intron	Mef2 -	chr2R	9945646	intron	Mef2 -	chr2R_9_9945001	chr2R_9945001	RAL-887
692	chr2R	9945450	9945468	chr2R	9945629	9945683	BS	5	208	5.5	6.5	6.0	0.7	233	chr2R	9945450	intron	Mef2 -	chr2R	9945566	intron	Mef2 -	chr2R	9945683	intron	Mef2 -	chr2R_5_9945001	chr2R_9945001	RAL-887
697	chr2R	10005853	10005881	chr2R	10007013	10007040	1360	6	1165	6.5	4.5	5.5	0.9	1187	chr2R	10005853	intron	Pka-R2 -	chr2R	10006446	intron	Pka-R2 -	chr2R	10007040	intron	Pka-R2 -	chr2R_6_10005001	chr2R_10005001	RAL-887
702	chr2R	10176865	10176910	chr2R	10186052	10186096	roo	9	9186	3.0	0.0	1.5	3.6	9231	chr2R	10176865	intron	KCNQ -	chr2R	10181480	intron	KCNQ -	chr2R	10186096	intron	KCNQ -	chr2R_9_10180001	chr2R_10180001	RAL-887
733	chr2R	10948024	10948044	chr2R	10955591	10955593	17.6	4	7564	0.5	8.5	4.5	0.7	7569	chr2R	10948024	intergenic	not near genes	chr2R	10951808	intergenic	not near genes	chr2R	10955593	intergenic	not near genes	chr2R_4_10950001	chr2R_10950001	RAL-887
736	chr2R	10979652	10979684	chr2R	10980136	10980173	297	4	488	0.0	4.5	2.2	1.2	521	chr2R	10979652	intergenic	not near genes	chr2R	10979912	intergenic	not near genes	chr2R	10980173	intergenic	not near genes	chr2R_4_10975001	chr2R_10975001	RAL-887
737	chr2R	11009800	11009847	chr2R	11018989	11019041	roo	12	9185	3.5	2.0	2.8	3.2	9241	chr2R	11009800	intron	luna -	chr2R	11014420	intron	luna -	chr2R	11019041	intron	luna -	chr2R_12_11010001	chr2R_11010001	RAL-887
738	chr2R	11019862	11019914	chr2R	11024947	11024967	jockey	5	5077	3.5	2.5	3.0	1.2	5105	chr2R	11019862	intron	luna -	chr2R	11022414	intron	luna -	chr2R	11024967	intron	luna -	chr2R_5_11020001	chr2R_11020001	RAL-887
741	chr2R	11134098	11134134	chr2R	11134359	11134395	pogo	5	261	2.0	4.0	3.0	1.2	297	chr2R	11134098	intergenic	not near genes	chr2R	11134246	intergenic	not near genes	chr2R	11134395	intergenic	not near genes	chr2R_5_11130001	chr2R_11130001	RAL-887
744	chr2R	11207829	11207836	chr2R	11208014	11208049	BS	7	205	7.5	5.5	6.5	0.9	220	chr2R	11207829	intron	shn +	chr2R	11207939	intron	shn +	chr2R	11208049	intron	shn +	chr2R_7_11205001	chr2R_11205001	RAL-887
745	chr2R	11207838	11207846	chr2R	11208012	11208046	BS	5	200	7.0	5.5	6.2	0.7	208	chr2R	11207838	intron	shn +	chr2R	11207942	intron	shn +	chr2R	11208046	intron	shn +	chr2R_5_11205001	chr2R_11205001	RAL-887
748	chr2R	11415501	11415550	chr2R	11418665	11418719	opus	8	3162	3.5	5.0	4.2	1.5	3218	chr2R	11415501	intron	Drip -	chr2R	11417110	intron	Drip -	chr2R	11418719	intron	Drip -	chr2R_8_11415001	chr2R_11415001	RAL-887
751	chr2R	11472631	11472678	chr2R	11473847	11473893	pogo	24	1216	4.0	3.5	3.8	5.0	1262	chr2R	11472631	intergenic	not near genes	chr2R	11473262	intergenic	not near genes	chr2R	11473893	intergenic	not near genes	chr2R_24_11470001	chr2R_11470001	RAL-887
767	chr2R	12501691	12501723	chr2R	12503859	12503867	Rt1c	11	2170	1.5	4.0	2.8	2.9	2176	chr2R	12501691	intron	fdl -	chr2R	12502779	intron	fdl -	chr2R	12503867	intron	fdl -	chr2R_11_12500001	chr2R_12500001	RAL-887
774	chr2R	12789282	12789325	chr2R	12797664	12797708	roo	8	8368	3.0	2.0	2.5	2.3	8426	chr2R	12789282	intron,3` UTR	sca +,CR45137 -	chr2R	12793495	intron,intron	sca +,CR45137 -	chr2R	12797708	intron,3` UTR	sca +,CR45137 -	chr2R_8_12790001	chr2R_12790001	RAL-887
775	chr2R	12819433	12819471	chr2R	12824523	12824568	jockey	10	5093	2.0	3.5	2.8	2.6	5135	chr2R	12819433	intergenic	not near genes	chr2R	12822000	intergenic	not near genes	chr2R	12824568	intergenic	not near genes	chr2R_10_12820001	chr2R_12820001	RAL-887
779	chr2R	13136823	13136869	chr2R	13141640	13141656	Doc	10	4811	3.0	4.0	3.5	2.2	4833	chr2R	13136823	exon	Cap-G +	chr2R	13139240	intron	Cap-G +	chr2R	13141656	intron	Cap-G +	chr2R_10_13135001	chr2R_13135001	RAL-887
786	chr2R	13580494	13580534	chr2R	13580852	13580874	jockey	7	359	0.5	7.0	3.8	1.5	380	chr2R	13580494	3` UTR	CG6191 -	chr2R	13580684	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R	13580874	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R_7_13580001	chr2R_13580001	RAL-887
789	chr2R	13728115	13728160	chr2R	13735792	13735837	opus	10	7677	5.0	2.0	3.5	2.2	7722	chr2R	13728115	intron	fas +	chr2R	13731976	intron	fas +	chr2R	13735837	intron	fas +	chr2R_10_13730001	chr2R_13730001	RAL-887
802	chr2R	14467286	14467325	chr2R	14476455	14476497	roo	12	9167	3.0	7.0	5.0	2.0	9211	chr2R	14467286	intergenic	not near genes	chr2R	14471892	intergenic	not near genes	chr2R	14476497	5` UTR	CR44462 +	chr2R_12_14470001	chr2R_14470001	RAL-887
817	chr2R	15004716	15004758	chr2R	15005056	15005090	jockey	11	346	4.0	3.0	3.5	2.4	374	chr2R	15004716	intergenic	not near genes	chr2R	15004903	intergenic	not near genes	chr2R	15005090	intergenic	not near genes	chr2R_11_15000001	chr2R_15000001	RAL-887
818	chr2R	15015442	15015488	chr2R	15022886	15022925	mdg1	15	7442	4.5	4.0	4.2	2.9	7483	chr2R	15015442	intron	hbs +	chr2R	15019184	intron	hbs +	chr2R	15022925	intron	hbs +	chr2R_15_15015001	chr2R_15015001	RAL-887
821	chr2R	15119297	15119347	chr2R	15127798	15127847	Tirant	8	8499	6.5	2.5	4.5	1.5	8550	chr2R	15119297	intron	chn +	chr2R	15123572	intron	chn +	chr2R	15127847	intron	chn +	chr2R_8_15120001	chr2R_15120001	RAL-887
839	chr2R	16539626	16539650	chr2R	16544855	16544878	copia	4	5229	4.0	2.0	3.0	1.0	5252	chr2R	16539626	intergenic	not near genes	chr2R	16542252	intergenic	not near genes	chr2R	16544878	intergenic	not near genes	chr2R_4_16540001	chr2R_16540001	RAL-887
840	chr2R	16539655	16539668	chr2R	16544849	16544867	copia	4	5213	3.0	1.0	2.0	1.3	5212	chr2R	16539655	intergenic	not near genes	chr2R	16542261	intergenic	not near genes	chr2R	16544867	intergenic	not near genes	chr2R_4_16540001	chr2R_16540001	RAL-887
857	chr2R	17147224	17147259	chr2R	17152275	17152310	jockey	10	5047	5.5	7.5	6.5	1.3	5086	chr2R	17147224	intergenic	not near genes	chr2R	17149767	intergenic	not near genes	chr2R	17152310	intergenic	not near genes	chr2R_10_17145001	chr2R_17145001	RAL-887
859	chr2R	17236500	17236534	chr2R	17241716	17241754	copia	10	5221	4.5	7.5	6.0	1.4	5254	chr2R	17236500	intron	mbl +	chr2R	17239127	intron	mbl +	chr2R	17241754	intron	mbl +	chr2R_10_17235001	chr2R_17235001	RAL-887
865	chr2R	17485913	17485946	chr2R	17490703	17490733	F-element	4	4788	4.0	6.0	5.0	0.7	4820	chr2R	17485913	5` UTR,intron	CG43110 -,NT5E-2 +	chr2R	17488323	intron	NT5E-2 +	chr2R	17490733	intron	NT5E-2 +	chr2R_4_17485001	chr2R_17485001	RAL-887
868	chr2R	17782346	17782379	chr2R	17783569	17783602	pogo	6	1223	1.5	3.5	2.5	1.7	1256	chr2R	17782346	intergenic	CG33981 -,fab1 -	chr2R	17782974	intergenic	not near genes	chr2R	17783602	intergenic	mir-31a -	chr2R_6_17780001	chr2R_17780001	RAL-887
869	chr2R	17784014	17784047	chr2R	17784271	17784294	pogo	9	256	2.0	2.5	2.2	2.8	280	chr2R	17784014	intergenic	mir-31a -	chr2R	17784154	intergenic	mir-31a -	chr2R	17784294	intergenic	mir-31a -	chr2R_9_17780001	chr2R_17780001	RAL-887
873	chr2R	18045654	18045687	chr2R	18046026	18046059	jockey	4	372	4.0	2.0	3.0	1.0	405	chr2R	18045654	intergenic	not near genes	chr2R	18045856	intergenic	not near genes	chr2R	18046059	intergenic	CG5767 -	chr2R_4_18045001	chr2R_18045001	RAL-887
879	chr2R	18358384	18358409	chr2R	18372606	18372641	roo	8	14227	6.5	4.5	5.5	1.2	14257	chr2R	18358384	intergenic	not near genes	chr2R	18365512	intergenic	not near genes	chr2R	18372641	intergenic	not near genes	chr2R_8_18365001	chr2R_18365001	RAL-887
882	chr2R	18487825	18487853	chr2R	18495296	18495340	blood	5	7472	1.0	5.5	3.2	1.2	7515	chr2R	18487825	intron	CG30116 -	chr2R	18491582	intron	CG30116 -	chr2R	18495340	intron	CG30116 -	chr2R_5_18490001	chr2R_18490001	RAL-887
884	chr2R	18575813	18575831	chr2R	18581991	18582037	3S18	13	6202	1.5	5.0	3.2	3.1	6224	chr2R	18575813	intron	GEFmeso -	chr2R	18578925	intron	GEFmeso -	chr2R	18582037	intron	GEFmeso -	chr2R_13_18575001	chr2R_18575001	RAL-887
885	chr2R	18590848	18590881	chr2R	18600020	18600036	roo	6	9164	6.0	7.0	6.5	0.8	9188	chr2R	18590848	intron	GEFmeso -	chr2R	18595442	intron	GEFmeso -	chr2R	18600036	intron	GEFmeso -	chr2R_6_18595001	chr2R_18595001	RAL-887
886	chr2R	18590885	18590896	chr2R	18600019	18600068	roo	4	9162	3.5	7.0	5.2	0.6	9183	chr2R	18590885	intron	GEFmeso -	chr2R	18595476	intron	GEFmeso -	chr2R	18600068	intron	GEFmeso -	chr2R_4_18595001	chr2R_18595001	RAL-887
906	chr2R	19715840	19715849	chr2R	19723328	19723338	blood	4	7488	10.5	5.5	8.0	0.4	7498	chr2R	19715840	intergenic	not near genes	chr2R	19719589	intergenic	not near genes	chr2R	19723338	intergenic	not near genes	chr2R_4_19715001	chr2R_19715001	RAL-887
907	chr2R	19715852	19715857	chr2R	19723326	19723331	blood	6	7483	8.5	5.0	6.8	0.8	7479	chr2R	19715852	intergenic	not near genes	chr2R	19719592	intergenic	not near genes	chr2R	19723331	intergenic	not near genes	chr2R_6_19715001	chr2R_19715001	RAL-887
910	chr2R	19776585	19776625	chr2R	19779925	19779953	jockey	11	3339	2.5	3.5	3.0	2.8	3368	chr2R	19776585	intergenic	not near genes	chr2R	19778269	intergenic	not near genes	chr2R	19779953	intergenic	not near genes	chr2R_11_19775001	chr2R_19775001	RAL-887
912	chr2R	19914835	19914852	chr2R	19922267	19922281	mdg1	4	7431	8.0	1.5	4.8	0.7	7446	chr2R	19914835	intergenic	not near genes	chr2R	19918558	intergenic	not near genes	chr2R	19922281	intergenic	not near genes	chr2R_4_19915001	chr2R_19915001	RAL-887
914	chr2R	19957424	19957459	chr2R	19962630	19962681	copia	10	5202	5.5	4.0	4.8	1.7	5257	chr2R	19957424	intergenic	CG44623 +	chr2R	19960052	intergenic	not near genes	chr2R	19962681	intergenic	not near genes	chr2R_10_19960001	chr2R_19960001	RAL-887
917	chr2R	20069217	20069243	chr2R	20071875	20071900	opus	6	2656	0.5	1.5	1.0	3.0	2683	chr2R	20069217	intergenic	not near genes	chr2R	20070558	intergenic	not near genes	chr2R	20071900	intergenic	not near genes	chr2R_6_20070001	chr2R_20070001	RAL-887
928	chr2R	20739429	20739475	chr2R	20744214	20744241	F-element	10	4781	3.0	2.5	2.8	2.6	4812	chr2R	20739429	intron	dpr +	chr2R	20741835	intron	dpr +	chr2R	20744241	intron	dpr +	chr2R_10_20740001	chr2R_20740001	RAL-887
929	chr2R	20783301	20783328	chr2R	20788092	20788118	F-element	6	4789	2.5	2.0	2.2	1.9	4817	chr2R	20783301	intergenic	not near genes	chr2R	20785710	intergenic	not near genes	chr2R	20788118	intergenic	CG43666 -	chr2R_6_20785001	chr2R_20785001	RAL-887
939	chr2R	21151108	21151144	chr2R	21153761	21153797	opus	9	2652	5.5	6.5	6.0	1.3	2689	chr2R	21151108	intron	CG30389 -	chr2R	21152452	intron	CG30389 -	chr2R	21153797	intron	CG30389 -	chr2R_9_21150001	chr2R_21150001	RAL-887
952	chr2R	21738264	21738271	chr2R	21747442	21747451	roo	4	9179	6.5	5.0	5.8	0.6	9187	chr2R	21738264	intergenic	not near genes	chr2R	21742858	intergenic	not near genes	chr2R	21747451	intergenic	not near genes	chr2R_4_21740001	chr2R_21740001	RAL-887
953	chr2R	21753063	21753109	chr2R	21753567	21753614	roo	17	501	4.5	6.0	5.2	2.7	551	chr2R	21753063	intergenic	not near genes	chr2R	21753338	intergenic	not near genes	chr2R	21753614	intergenic	not near genes	chr2R_17_21750001	chr2R_21750001	RAL-887
954	chr2R	21809509	21809555	chr2R	21817764	21817809	roo	8	8258	1.0	2.5	1.8	2.9	8300	chr2R	21809509	intergenic	not near genes	chr2R	21813659	intergenic	not near genes	chr2R	21817809	intergenic	not near genes	chr2R_8_21810001	chr2R_21810001	RAL-887
963	chr2R	22349674	22349690	chr2R	22351477	22351492	jockey	6	1802	7.5	3.5	5.5	0.9	1818	chr2R	22349674	intron	Liprin-gamma -	chr2R	22350583	intron	Liprin-gamma -	chr2R	22351492	intron	Liprin-gamma -	chr2R_6_22350001	chr2R_22350001	RAL-887
964	chr2R	22349699	22349720	chr2R	22351476	22351523	jockey	10	1793	5.5	3.5	4.5	1.8	1824	chr2R	22349699	intron	Liprin-gamma -	chr2R	22350611	intron	Liprin-gamma -	chr2R	22351523	intron	Liprin-gamma -	chr2R_10_22350001	chr2R_22350001	RAL-887
965	chr2R	22360363	22360374	chr2R	22360815	22360827	jockey	5	452	7.5	3.0	5.2	0.8	464	chr2R	22360363	intron	Liprin-gamma -	chr2R	22360595	intron	Liprin-gamma -	chr2R	22360827	intron	Liprin-gamma -	chr2R_5_22360001	chr2R_22360001	RAL-887
971	chr2R	22525741	22525782	chr2R	22529313	22529316	jockey	15	3568	5.5	6.5	6.0	2.1	3575	chr2R	22525741	intron	px -	chr2R	22527528	intron	px -	chr2R	22529316	intron	px -	chr2R_15_22525001	chr2R_22525001	RAL-887
978	chr2R	22774949	22775001	chr2R	22775381	22775440	jockey	15	433	4.0	4.5	4.2	2.9	491	chr2R	22774949	intron	CG42260 -	chr2R	22775194	intron	CG42260 -	chr2R	22775440	intron	CG42260 -	chr2R_15_22775001	chr2R_22775001	RAL-887
980	chr2R	22843008	22843051	chr2R	22844989	22844998	flea	10	1978	6.0	6.5	6.2	1.4	1990	chr2R	22843008	intergenic	CG9826 +	chr2R	22844003	intergenic	not near genes	chr2R	22844998	intergenic	not near genes	chr2R_10_22840001	chr2R_22840001	RAL-887
1005	chr2R	23914294	23914332	chr2R	23921928	23921964	412	9	7632	5.5	6.5	6.0	1.3	7670	chr2R	23914294	exon	kcc +	chr2R	23918129	intron	kcc +	chr2R	23921964	exon	kcc +	chr2R_9_23915001	chr2R_23915001	RAL-887
1008	chr2R	24147064	24147093	chr2R	24154662	24154686	412	9	7592	4.0	7.5	5.8	1.3	7622	chr2R	24147064	intron	Dat +	chr2R	24150875	intron	Dat +	chr2R	24154686	intron	Dat +	chr2R_9_24150001	chr2R_24150001	RAL-887
1009	chr2R	24177221	24177260	chr2R	24184726	24184765	412	11	7500	5.5	5.0	5.2	1.8	7544	chr2R	24177221	3` UTR	Nop60B +	chr2R	24180993	intron	Nop60B +	chr2R	24184765	3` UTR	Nop60B +	chr2R_11_24180001	chr2R_24180001	RAL-887
1014	chr2R	24353417	24353441	chr2R	24361790	24361807	roo	9	8373	5.0	7.0	6.0	1.3	8390	chr2R	24353417	intron,intron	bs +,CR44811 -	chr2R	24357612	intron,intron	bs +,CR44811 -	chr2R	24361807	intron,intron	bs +,CR44811 -	chr2R_9_24355001	chr2R_24355001	RAL-887
1019	chr2R	24647572	24647618	chr2R	24655148	24655179	412	15	7571	4.5	1.5	3.0	3.8	7607	chr2R	24647572	intergenic	not near genes	chr2R	24651376	intergenic	not near genes	chr2R	24655179	intergenic	not near genes	chr2R_15_24650001	chr2R_24650001	RAL-887
1020	chr2R	24727868	24727911	chr2R	24735393	24735403	mdg1	11	7518	2.5	5.5	4.0	2.2	7535	chr2R	24727868	intron	Mid1 -	chr2R	24731636	intron	Mid1 -	chr2R	24735403	intron	Mid1 -	chr2R_11_24730001	chr2R_24730001	RAL-887
1021	chr2R	24763608	24763643	chr2R	24765585	24765634	G2	8	1988	3.5	4.5	4.0	1.6	2026	chr2R	24763608	exon	CG3894 +	chr2R	24764621	intron	CG3894 +	chr2R	24765634	exon	CG3894 +	chr2R_8_24760001	chr2R_24760001	RAL-887
1033	chr2R	25141644	25141673	chr2R	25159351	25159383	roo	10	17706	5.0	9.0	7.0	1.2	17739	chr2R	25141644	intergenic	not near genes	chr2R	25150514	intergenic	not near genes	chr2R	25159383	intergenic	not near genes	chr2R_10_25150001	chr2R_25150001	RAL-887
1044	chr3L	110195	110234	chr3L	119380	119419	roo	10	9184	1.5	3.0	2.2	3.1	9224	chr3L	110195	intergenic	not near genes	chr3L	114807	intergenic	not near genes	chr3L	119419	intergenic	not near genes	chr3L_10_110001	chr3L_110001	RAL-887
1049	chr3L	402671	402718	chr3L	409742	409787	297	9	7071	3.0	6.0	4.5	1.6	7116	chr3L	402671	intergenic	not near genes	chr3L	406229	intergenic	not near genes	chr3L	409787	intergenic	not near genes	chr3L_9_405001	chr3L_405001	RAL-887
1062	chr3L	789895	789946	chr3L	790400	790448	roo	12	502	2.5	3.5	3.0	3.0	553	chr3L	789895	intergenic	not near genes	chr3L	790172	intergenic	not near genes	chr3L	790448	intergenic	not near genes	chr3L_12_790001	chr3L_790001	RAL-887
1064	chr3L	857979	858032	chr3L	866479	866493	Tirant	11	8486	4.5	4.0	4.2	2.1	8514	chr3L	857979	intergenic	not near genes	chr3L	862236	intergenic	not near genes	chr3L	866493	intergenic	CG12502 +	chr3L_11_860001	chr3L_860001	RAL-887
1066	chr3L	925158	925209	chr3L	932601	932655	mdg1	17	7443	4.0	5.5	4.8	2.9	7497	chr3L	925158	intron	Glut1 +	chr3L	928906	intron	Glut1 +	chr3L	932655	intron	Glut1 +	chr3L_17_925001	chr3L_925001	RAL-887
1067	chr3L	939772	939798	chr3L	940912	940936	jockey	9	1139	4.0	8.0	6.0	1.3	1164	chr3L	939772	intron	Glut1 +	chr3L	940354	intron	Glut1 +	chr3L	940936	intron	Glut1 +	chr3L_9_940001	chr3L_940001	RAL-887
1073	chr3L	1047337	1047385	chr3L	1055165	1055181	412	5	7815	0.5	3.0	1.8	1.8	7844	chr3L	1047337	intron	bab1 -	chr3L	1051259	intron	bab1 -	chr3L	1055181	intron	bab1 -	chr3L_5_1050001	chr3L_1050001	RAL-887
1075	chr3L	1154117	1154124	chr3L	1163286	1163293	roo	4	9169	8.0	4.0	6.0	0.6	9176	chr3L	1154117	intron	bab2 -	chr3L	1158705	intron	bab2 -	chr3L	1163293	intron	bab2 -	chr3L_4_1155001	chr3L_1155001	RAL-887
1076	chr3L	1154126	1154163	chr3L	1163282	1163333	roo	9	9165	2.5	3.5	3.0	2.2	9207	chr3L	1154126	intron	bab2 -	chr3L	1158730	intron	bab2 -	chr3L	1163333	intron	bab2 -	chr3L_9_1155001	chr3L_1155001	RAL-887
1077	chr3L	1219574	1219615	chr3L	1227327	1227367	412	12	7746	3.0	4.5	3.8	2.5	7793	chr3L	1219574	intron	mwh +	chr3L	1223470	intron	mwh +	chr3L	1227367	intron	mwh +	chr3L_12_1220001	chr3L_1220001	RAL-887
1083	chr3L	1505982	1506028	chr3L	1513599	1513644	17.6	11	7616	7.5	5.0	6.2	1.5	7662	chr3L	1505982	intron,intron	Psa +,cue -	chr3L	1509813	intron,intron	Psa +,cue -	chr3L	1513644	intron,intron	Psa +,cue -	chr3L_11_1505001	chr3L_1505001	RAL-887
1084	chr3L	1740851	1740878	chr3L	1741097	1741107	pogo	7	251	4.0	3.5	3.8	1.5	256	chr3L	1740851	intron	Gk +	chr3L	1740979	intron	Gk +	chr3L	1741107	intron	Gk +	chr3L_7_1740001	chr3L_1740001	RAL-887
1091	chr3L	2447490	2447534	chr3L	2456665	2456699	roo	13	9170	6.0	5.5	5.8	1.9	9209	chr3L	2447490	intron	CG45186 +	chr3L	2452094	intron	CG45186 +	chr3L	2456699	intron	CG45186 +	chr3L_13_2450001	chr3L_2450001	RAL-887
1103	chr3L	2927846	2927867	chr3L	2936116	2936164	Tirant	8	8293	2.5	2.0	2.2	2.5	8318	chr3L	2927846	intron	Shab +	chr3L	2932005	intron	Shab +	chr3L	2936164	intron	Shab +	chr3L_8_2930001	chr3L_2930001	RAL-887
1106	chr3L	3040308	3040349	chr3L	3042117	3042158	S-element	8	1806	4.0	2.0	3.0	2.0	1850	chr3L	3040308	3` UTR	CG2162 +	chr3L	3041233	intergenic	not near genes	chr3L	3042158	intergenic	Jafrac2 +	chr3L_8_3040001	chr3L_3040001	RAL-887
1108	chr3L	3061287	3061309	chr3L	3069868	3069877	Tirant	5	8585	2.5	3.5	3.0	1.2	8590	chr3L	3061287	intron	CG32486 -	chr3L	3065582	intron	CG32486 -	chr3L	3069877	intron	CG32486 -	chr3L_5_3065001	chr3L_3065001	RAL-887
1110	chr3L	3281442	3281448	chr3L	3281946	3281958	Doc	5	509	11.0	5.0	8.0	0.6	516	chr3L	3281442	intron	CG12017 +	chr3L	3281700	intron	CG12017 +	chr3L	3281958	intron	CG12017 +	chr3L_5_3280001	chr3L_3280001	RAL-887
1111	chr3L	3281456	3281467	chr3L	3281931	3281951	Doc	8	493	8.5	2.5	5.5	1.2	495	chr3L	3281456	intron	CG12017 +	chr3L	3281704	intron	CG12017 +	chr3L	3281951	intron	CG12017 +	chr3L_8_3280001	chr3L_3280001	RAL-887
1115	chr3L	3475059	3475087	chr3L	3475520	3475542	jockey	11	460	6.0	5.0	5.5	1.7	483	chr3L	3475059	intron	CG42324 +	chr3L	3475300	intron	CG42324 +	chr3L	3475542	intron	CG42324 +	chr3L_11_3475001	chr3L_3475001	RAL-887
1116	chr3L	3475091	3475108	chr3L	3475516	3475543	jockey	7	445	3.5	4.5	4.0	1.4	452	chr3L	3475091	intron	CG42324 +	chr3L	3475317	intron	CG42324 +	chr3L	3475543	intron	CG42324 +	chr3L_7_3475001	chr3L_3475001	RAL-887
1122	chr3L	3601286	3601329	chr3L	3606617	3606657	copia	6	5329	3.0	5.0	4.0	1.2	5371	chr3L	3601286	intron	Eip63E +	chr3L	3603972	intron	Eip63E +	chr3L	3606657	intron	Eip63E +	chr3L_6_3600001	chr3L_3600001	RAL-887
1130	chr3L	3833729	3833754	chr3L	3833988	3833990	pogo	5	255	4.5	1.5	3.0	1.2	261	chr3L	3833729	intron	enc +	chr3L	3833860	intron	enc +	chr3L	3833990	intron	enc +	chr3L_5_3830001	chr3L_3830001	RAL-887
1134	chr3L	4328720	4328763	chr3L	4336238	4336253	412	6	7513	5.0	4.5	4.8	1.0	7533	chr3L	4328720	intron	Cip4 -	chr3L	4332486	intron	Cip4 -	chr3L	4336253	intron	Cip4 -	chr3L_6_4330001	chr3L_4330001	RAL-887
1142	chr3L	4901118	4901131	chr3L	4907324	4907333	diver	4	6206	4.5	5.0	4.8	0.7	6215	chr3L	4901118	intergenic	CG13704 +	chr3L	4904226	intergenic	not near genes	chr3L	4907333	intergenic	not near genes	chr3L_4_4900001	chr3L_4900001	RAL-887
1143	chr3L	4901135	4901156	chr3L	4907319	4907366	diver	10	6205	4.0	3.5	3.8	2.1	6231	chr3L	4901135	intergenic	CG13704 +	chr3L	4904250	intergenic	not near genes	chr3L	4907366	intergenic	not near genes	chr3L_10_4900001	chr3L_4900001	RAL-887
1144	chr3L	5034138	5034177	chr3L	5043310	5043348	roo	4	9166	4.5	0.0	2.2	1.2	9210	chr3L	5034138	intron	Con -	chr3L	5038743	intron	Con -	chr3L	5043348	intron	Con -	chr3L_4_5035001	chr3L_5035001	RAL-887
1145	chr3L	5045438	5045469	chr3L	5050238	5050270	Doc	5	4801	9.5	4.0	6.8	0.6	4832	chr3L	5045438	intron	Con -	chr3L	5047854	intron	Con -	chr3L	5050270	intron	Con -	chr3L_5_5045001	chr3L_5045001	RAL-887
1148	chr3L	5299140	5299183	chr3L	5306595	5306637	Quasimodo	4	7455	1.5	3.5	2.5	1.1	7497	chr3L	5299140	intergenic	not near genes	chr3L	5302888	intergenic	not near genes	chr3L	5306637	intergenic	not near genes	chr3L_4_5300001	chr3L_5300001	RAL-887
1162	chr3L	5910013	5910063	chr3L	5910273	5910323	pogo	12	254	1.0	3.0	2.0	4.0	310	chr3L	5910013	intron	CG13288 +	chr3L	5910168	intron	CG13288 +	chr3L	5910323	intron	CG13288 +	chr3L_12_5910001	chr3L_5910001	RAL-887
1163	chr3L	5926326	5926346	chr3L	5926502	5926552	BS	6	201	4.0	4.5	4.2	1.2	226	chr3L	5926326	intron	Vap-33B +	chr3L	5926439	intron	Vap-33B +	chr3L	5926552	intron	Vap-33B +	chr3L_6_5925001	chr3L_5925001	RAL-887
1164	chr3L	6001675	6001707	chr3L	6004395	6004426	jockey	5	2717	7.0	0.0	3.5	1.1	2751	chr3L	6001675	intron	PVRAP +	chr3L	6003050	intron	PVRAP +	chr3L	6004426	intron	PVRAP +	chr3L_5_6000001	chr3L_6000001	RAL-887
1166	chr3L	6040345	6040394	chr3L	6042721	6042767	Doc	13	2373	5.0	3.5	4.2	2.5	2422	chr3L	6040345	intergenic	Jon65Aiv +	chr3L	6041556	intergenic	not near genes	chr3L	6042767	intergenic	not near genes	chr3L_13_6040001	chr3L_6040001	RAL-887
1168	chr3L	6220900	6220937	chr3L	6230071	6230109	roo	11	9171	5.5	8.0	6.8	1.4	9209	chr3L	6220900	5` UTR	pncr008:3L +	chr3L	6225504	intergenic	not near genes	chr3L	6230109	intergenic	not near genes	chr3L_11_6225001	chr3L_6225001	RAL-887
1169	chr3L	6220939	6220946	chr3L	6230067	6230082	roo	4	9150	4.0	6.0	5.0	0.7	9143	chr3L	6220939	5` UTR	pncr008:3L +	chr3L	6225510	intergenic	not near genes	chr3L	6230082	intergenic	not near genes	chr3L_4_6225001	chr3L_6225001	RAL-887
1172	chr3L	6334992	6335043	chr3L	6335481	6335519	297	12	483	3.5	2.0	2.8	3.2	527	chr3L	6334992	intron	CG13300 -	chr3L	6335256	intron	CG13300 -	chr3L	6335519	intron	CG13300 -	chr3L_12_6335001	chr3L_6335001	RAL-887
1175	chr3L	6405646	6405685	chr3L	6432130	6432167	roo	8	26482	3.0	4.0	3.5	1.8	26521	chr3L	6405646	intron	CG42747 +	chr3L	6418906	intron	CG42747 +	chr3L	6432167	intron	CG42747 +	chr3L_8_6415001	chr3L_6415001	RAL-887
1186	chr3L	6781103	6781152	chr3L	6783136	6783177	Doc	4	2031	0.5	0.0	0.2	3.3	2074	chr3L	6781103	intergenic	not near genes	chr3L	6782140	intergenic	not near genes	chr3L	6783177	intergenic	not near genes	chr3L_4_6780001	chr3L_6780001	RAL-887
1189	chr3L	6855932	6855951	chr3L	6860722	6860755	Doc	5	4798	4.5	8.5	6.5	0.7	4823	chr3L	6855932	intergenic	not near genes	chr3L	6858344	intergenic	not near genes	chr3L	6860755	intergenic	not near genes	chr3L_5_6855001	chr3L_6855001	RAL-887
1192	chr3L	6887501	6887541	chr3L	6895013	6895053	roo	9	7511	6.0	2.5	4.2	1.7	7552	chr3L	6887501	intergenic	not near genes	chr3L	6891277	intergenic	not near genes	chr3L	6895053	intergenic	not near genes	chr3L_9_6890001	chr3L_6890001	RAL-887
1200	chr3L	7377294	7377344	chr3L	7380419	7380469	297	9	3123	3.0	5.0	4.0	1.8	3175	chr3L	7377294	intron	SMSr -	chr3L	7378882	intron	SMSr -	chr3L	7380469	intron	SMSr -	chr3L_9_7375001	chr3L_7375001	RAL-887
1204	chr3L	7498736	7498761	chr3L	7503534	7503558	F-element	4	4797	4.5	3.0	3.8	0.8	4822	chr3L	7498736	5` UTR	CG8539 -	chr3L	7501147	intergenic	not near genes	chr3L	7503558	intergenic	not near genes	chr3L_4_7500001	chr3L_7500001	RAL-887
1207	chr3L	7793702	7793732	chr3L	7800766	7800804	297	8	7071	5.5	5.0	5.2	1.3	7102	chr3L	7793702	intron	CG32369 -	chr3L	7797253	intron	CG32369 -	chr3L	7800804	intron	CG32369 -	chr3L_8_7795001	chr3L_7795001	RAL-887
1210	chr3L	7985356	7985399	chr3L	7987695	7987722	NOF	11	2342	4.5	5.5	5.0	1.8	2366	chr3L	7985356	intron	nmo +	chr3L	7986539	intron	nmo +	chr3L	7987722	intron	nmo +	chr3L_11_7985001	chr3L_7985001	RAL-887
1218	chr3L	8498290	8498326	chr3L	8505777	8505813	blood	6	7483	1.0	5.5	3.2	1.4	7523	chr3L	8498290	intron	CG43163 -	chr3L	8502052	intron	CG43163 -	chr3L	8505813	intron	CG43163 -	chr3L_6_8500001	chr3L_8500001	RAL-887
1221	chr3L	8791259	8791299	chr3L	8796699	8796737	I-element	9	5435	4.5	3.5	4.0	1.8	5478	chr3L	8791259	exon	Fhos +	chr3L	8793998	intron	Fhos +	chr3L	8796737	intron	Fhos +	chr3L_9_8790001	chr3L_8790001	RAL-887
1231	chr3L	9076908	9076953	chr3L	9084488	9084501	412	16	7576	4.0	9.0	6.5	2.1	7593	chr3L	9076908	exon	Tequila +	chr3L	9080704	intron	Tequila +	chr3L	9084501	exon	Tequila +	chr3L_16_9080001	chr3L_9080001	RAL-887
1232	chr3L	9130542	9130581	chr3L	9134318	9134361	412	7	3779	4.0	5.0	4.5	1.3	3819	chr3L	9130542	intergenic	bol -	chr3L	9132452	intergenic	not near genes	chr3L	9134361	intergenic	Dhpr +	chr3L_7_9130001	chr3L_9130001	RAL-887
1233	chr3L	9164693	9164729	chr3L	9166162	9166187	hobo	12	1480	4.0	2.0	3.0	3.0	1494	chr3L	9164693	intron	Rdl -	chr3L	9165440	intron	Rdl -	chr3L	9166187	intron	Rdl -	chr3L_12_9165001	chr3L_9165001	RAL-887
1234	chr3L	9219225	9219252	chr3L	9219916	9219932	jockey	8	688	7.0	9.5	8.2	0.9	707	chr3L	9219225	intergenic	not near genes	chr3L	9219578	intergenic	not near genes	chr3L	9219932	intergenic	not near genes	chr3L_8_9215001	chr3L_9215001	RAL-887
1235	chr3L	9219253	9219270	chr3L	9219909	9219962	jockey	6	680	5.5	5.5	5.5	0.9	709	chr3L	9219253	intergenic	not near genes	chr3L	9219608	intergenic	not near genes	chr3L	9219962	intergenic	not near genes	chr3L_6_9215001	chr3L_9215001	RAL-887
1237	chr3L	9443495	9443535	chr3L	9445300	9445334	S-element	10	1800	5.5	1.5	3.5	2.2	1839	chr3L	9443495	intron	CG33926 +	chr3L	9444414	intron	CG33926 +	chr3L	9445334	intron	CG33926 +	chr3L_10_9440001	chr3L_9440001	RAL-887
1238	chr3L	9501693	9501716	chr3L	9502191	9502222	roo	4	504	4.0	5.0	4.5	0.7	529	chr3L	9501693	intron	path -	chr3L	9501958	intron	path -	chr3L	9502222	intron	path -	chr3L_4_9500001	chr3L_9500001	RAL-887
1239	chr3L	9501717	9501732	chr3L	9502186	9502238	roo	8	500	1.5	4.5	3.0	2.0	521	chr3L	9501717	intron	path -	chr3L	9501978	intron	path -	chr3L	9502238	intron	path -	chr3L_8_9500001	chr3L_9500001	RAL-887
1243	chr3L	9575890	9575940	chr3L	9580986	9581037	jockey	12	5092	8.5	8.5	8.5	1.3	5147	chr3L	9575890	intron	CG42673 +	chr3L	9578464	intron	CG42673 +	chr3L	9581037	intron	CG42673 +	chr3L_12_9575001	chr3L_9575001	RAL-887
1251	chr3L	9929649	9929694	chr3L	9938451	9938492	roo	11	8797	6.5	4.0	5.2	1.8	8843	chr3L	9929649	intron	CG34356 +	chr3L	9934070	intron	CG34356 +	chr3L	9938492	intron	CG34356 +	chr3L_11_9930001	chr3L_9930001	RAL-887
1265	chr3L	10414927	10414972	chr3L	10417318	10417336	Doc	11	2386	2.0	7.0	4.5	2.0	2409	chr3L	10414927	intergenic	CG12362 +	chr3L	10416132	intergenic	not near genes	chr3L	10417336	intergenic	not near genes	chr3L_11_10415001	chr3L_10415001	RAL-887
1277	chr3L	11087061	11087072	chr3L	11088857	11088875	S-element	6	1805	0.0	5.0	2.5	1.7	1814	chr3L	11087061	intron	JIL-1 -	chr3L	11087968	intron	JIL-1 -	chr3L	11088875	intron	JIL-1 -	chr3L_6_11085001	chr3L_11085001	RAL-887
1278	chr3L	11087073	11087082	chr3L	11088847	11088867	S-element	6	1789	0.0	2.0	1.0	3.0	1794	chr3L	11087073	intron	JIL-1 -	chr3L	11087970	intron	JIL-1 -	chr3L	11088867	intron	JIL-1 -	chr3L_6_11085001	chr3L_11085001	RAL-887
1279	chr3L	11105289	11105315	chr3L	11107009	11107046	X-element	6	1728	1.5	2.0	1.8	2.1	1757	chr3L	11105289	intergenic	not near genes	chr3L	11106168	intergenic	not near genes	chr3L	11107046	exon	CG32073 -	chr3L_6_11105001	chr3L_11105001	RAL-887
1282	chr3L	11264449	11264471	chr3L	11271421	11271443	17.6	8	6970	6.5	5.5	6.0	1.1	6994	chr3L	11264449	intergenic	not near genes	chr3L	11267946	intergenic	not near genes	chr3L	11271443	intergenic	not near genes	chr3L_8_11265001	chr3L_11265001	RAL-887
1285	chr3L	11329689	11329722	chr3L	11332902	11332921	jockey	8	3211	5.5	6.5	6.0	1.1	3232	chr3L	11329689	intergenic	not near genes	chr3L	11331305	intergenic	not near genes	chr3L	11332921	intergenic	not near genes	chr3L_8_11330001	chr3L_11330001	RAL-887
1298	chr3L	11723089	11723093	chr3L	11727886	11727908	Doc	4	4810	8.5	2.5	5.5	0.6	4819	chr3L	11723089	3` UTR	Bmcp +	chr3L	11725498	intron	Bmcp +	chr3L	11727908	3` UTR	Bmcp +	chr3L_4_11725001	chr3L_11725001	RAL-887
1299	chr3L	11723094	11723114	chr3L	11727874	11727929	Doc	4	4806	6.0	1.5	3.8	0.8	4835	chr3L	11723094	3` UTR	Bmcp +	chr3L	11725512	intron	Bmcp +	chr3L	11727929	3` UTR	Bmcp +	chr3L_4_11725001	chr3L_11725001	RAL-887
1332	chr3L	12874905	12874955	chr3L	12877216	12877262	jockey	6	2308	4.0	3.5	3.8	1.2	2357	chr3L	12874905	intergenic	not near genes	chr3L	12876084	intergenic	not near genes	chr3L	12877262	intergenic	not near genes	chr3L_6_12875001	chr3L_12875001	RAL-887
1333	chr3L	12919261	12919293	chr3L	12924753	12924765	Rt1c	6	5488	4.5	5.0	4.8	1.0	5504	chr3L	12919261	intergenic	not near genes	chr3L	12922013	intergenic	not near genes	chr3L	12924765	intergenic	not near genes	chr3L_6_12920001	chr3L_12920001	RAL-887
1335	chr3L	12957772	12957819	chr3L	12962274	12962321	copia	14	4500	3.0	4.5	3.8	2.9	4549	chr3L	12957772	intergenic	not near genes	chr3L	12960046	intergenic	not near genes	chr3L	12962321	intergenic	not near genes	chr3L_14_12960001	chr3L_12960001	RAL-887
1353	chr3L	13525140	13525186	chr3L	13532956	13533001	roo	11	7814	6.0	3.5	4.8	1.9	7861	chr3L	13525140	intergenic	not near genes	chr3L	13529070	intergenic	not near genes	chr3L	13533001	intergenic	not near genes	chr3L_11_13525001	chr3L_13525001	RAL-887
1355	chr3L	13804527	13804569	chr3L	13822833	13822868	roo	17	18302	5.0	6.0	5.5	2.6	18341	chr3L	13804527	intergenic	not near genes	chr3L	13813698	intergenic	not near genes	chr3L	13822868	intergenic	not near genes	chr3L_17_13810001	chr3L_13810001	RAL-887
1364	chr3L	14267353	14267396	chr3L	14271813	14271855	F-element	7	4459	7.5	2.5	5.0	1.2	4502	chr3L	14267353	intergenic	not near genes	chr3L	14269604	intergenic	not near genes	chr3L	14271855	intergenic	not near genes	chr3L_7_14265001	chr3L_14265001	RAL-887
1367	chr3L	14295970	14296014	chr3L	14296467	14296520	roo	8	504	2.0	3.5	2.8	2.1	550	chr3L	14295970	intron	fz +	chr3L	14296245	intron	fz +	chr3L	14296520	intron	fz +	chr3L_8_14295001	chr3L_14295001	RAL-887
1368	chr3L	14312046	14312054	chr3L	14316835	14316848	X-element	7	4814	1.0	2.0	1.5	2.8	4802	chr3L	14312046	exon	fz +	chr3L	14314447	intron	fz +	chr3L	14316848	intron	fz +	chr3L_7_14310001	chr3L_14310001	RAL-887
1373	chr3L	14468431	14468472	chr3L	14473655	14473698	copia	6	5226	3.5	3.5	3.5	1.3	5267	chr3L	14468431	intron	bbg -	chr3L	14471064	intron	bbg -	chr3L	14473698	intron	bbg -	chr3L_6_14470001	chr3L_14470001	RAL-887
1378	chr3L	14721167	14721200	chr3L	14723030	14723062	Rt1c	7	1850	5.5	2.0	3.8	1.5	1895	chr3L	14721167	intron	ome +	chr3L	14722114	intron	ome +	chr3L	14723062	intron	ome +	chr3L_7_14720001	chr3L_14720001	RAL-887
1379	chr3L	14721201	14721210	chr3L	14723026	14723063	Rt1c	5	1845	5.0	2.0	3.5	1.1	1862	chr3L	14721201	intron	ome +	chr3L	14722132	intron	ome +	chr3L	14723063	intron	ome +	chr3L_5_14720001	chr3L_14720001	RAL-887
1380	chr3L	14725580	14725584	chr3L	14728592	14728598	Doc	4	3012	3.0	1.0	2.0	1.3	3018	chr3L	14725580	intron	ome +	chr3L	14727089	intron	ome +	chr3L	14728598	intron	ome +	chr3L_4_14725001	chr3L_14725001	RAL-887
1383	chr3L	14954350	14954399	chr3L	14956039	14956088	transib2	10	1688	1.5	5.0	3.2	2.4	1738	chr3L	14954350	intergenic	not near genes	chr3L	14955219	intergenic	not near genes	chr3L	14956088	intergenic	not near genes	chr3L_10_14955001	chr3L_14955001	RAL-887
1385	chr3L	15085050	15085080	chr3L	15086216	15086224	1360	8	1170	2.0	7.5	4.8	1.4	1174	chr3L	15085050	intron	cp309 -	chr3L	15085637	intron	cp309 -	chr3L	15086224	intron	cp309 -	chr3L_8_15085001	chr3L_15085001	RAL-887
1391	chr3L	15295760	15295795	chr3L	15298615	15298658	gypsy5	5	2860	4.0	1.0	2.5	1.4	2898	chr3L	15295760	intergenic	not near genes	chr3L	15297209	intergenic	not near genes	chr3L	15298658	intergenic	Best4 +	chr3L_5_15295001	chr3L_15295001	RAL-887
1394	chr3L	15423741	15423783	chr3L	15426605	15426647	opus	6	2861	3.0	1.5	2.2	1.9	2906	chr3L	15423741	intergenic	not near genes	chr3L	15425194	intergenic	not near genes	chr3L	15426647	intergenic	not near genes	chr3L_6_15425001	chr3L_15425001	RAL-887
1396	chr3L	15554904	15554946	chr3L	15556711	15556752	S-element	9	1807	3.0	4.0	3.5	2.0	1848	chr3L	15554904	intron	AGO2 +	chr3L	15555828	intron	AGO2 +	chr3L	15556752	intron	AGO2 +	chr3L_9_15555001	chr3L_15555001	RAL-887
1404	chr3L	15899221	15899251	chr3L	15899789	15899793	jockey	6	561	2.0	4.0	3.0	1.5	572	chr3L	15899221	intergenic	pHCl -	chr3L	15899507	intergenic	pHCl -	chr3L	15899793	intergenic	sff -	chr3L_6_15895001	chr3L_15895001	RAL-887
1405	chr3L	15929177	15929222	chr3L	15938344	15938389	roo	10	9164	3.5	3.5	3.5	2.2	9212	chr3L	15929177	intron	Pka-C3 -	chr3L	15933783	intron	Pka-C3 -	chr3L	15938389	intron	Pka-C3 -	chr3L_10_15930001	chr3L_15930001	RAL-887
1410	chr3L	16184093	16184121	chr3L	16188930	16188960	X-element	4	4838	3.0	5.5	4.2	0.8	4867	chr3L	16184093	intergenic	not near genes	chr3L	16186526	intergenic	not near genes	chr3L	16188960	intergenic	not near genes	chr3L_4_16185001	chr3L_16185001	RAL-887
1414	chr3L	16443829	16443877	chr3L	16446189	16446207	Doc	11	2355	3.5	6.5	5.0	1.8	2378	chr3L	16443829	intron,intron	CG33158 +,dsx-c73A -	chr3L	16445018	intron,intron	CG33158 +,dsx-c73A -	chr3L	16446207	intron,intron	CG33158 +,dsx-c73A -	chr3L_11_16445001	chr3L_16445001	RAL-887
1416	chr3L	16493959	16494011	chr3L	16494496	16494533	jockey	11	531	3.5	6.0	4.8	1.9	574	chr3L	16493959	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494246	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494533	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L_11_16490001	chr3L_16490001	RAL-887
1420	chr3L	16616490	16616540	chr3L	16621837	16621881	297	13	5343	2.5	3.0	2.8	3.4	5391	chr3L	16616490	3` UTR	Abl -	chr3L	16619186	3` UTR	Abl -	chr3L	16621881	3` UTR	Abl -	chr3L_13_16615001	chr3L_16615001	RAL-887
1428	chr3L	16945714	16945756	chr3L	16954878	16954890	roo	21	9155	3.0	4.0	3.5	4.7	9176	chr3L	16945714	exon	Obp73a +	chr3L	16950302	intergenic	not near genes	chr3L	16954890	5` UTR	Nc73EF +	chr3L_21_16950001	chr3L_16950001	RAL-887
1429	chr3L	17084988	17085032	chr3L	17094154	17094201	roo	14	9168	5.0	3.5	4.2	2.7	9213	chr3L	17084988	intron	Rbp6 -	chr3L	17089594	intron	Rbp6 -	chr3L	17094201	intron	Rbp6 -	chr3L_14_17085001	chr3L_17085001	RAL-887
1439	chr3L	17516960	17517006	chr3L	17524538	17524561	412	8	7570	6.5	5.0	5.8	1.2	7601	chr3L	17516960	intron	CG7564 +	chr3L	17520760	intron	CG7564 +	chr3L	17524561	3` UTR	CG7564 +	chr3L_8_17520001	chr3L_17520001	RAL-887
1444	chr3L	17799794	17799834	chr3L	17801601	17801641	S-element	10	1806	0.5	1.0	0.8	5.6	1847	chr3L	17799794	intron	NUCB1 -	chr3L	17800718	intron	NUCB1 -	chr3L	17801641	intron	NUCB1 -	chr3L_10_17800001	chr3L_17800001	RAL-887
1445	chr3L	17918356	17918405	chr3L	17921177	17921228	opus	6	2823	2.5	1.5	2.0	2.0	2872	chr3L	17918356	intergenic	not near genes	chr3L	17919792	intergenic	not near genes	chr3L	17921228	intergenic	not near genes	chr3L_6_17915001	chr3L_17915001	RAL-887
1452	chr3L	18047690	18047725	chr3L	18056766	18056800	roo	4	9076	3.5	1.5	2.5	1.1	9110	chr3L	18047690	intron	Eip75B -	chr3L	18052245	intron	Eip75B -	chr3L	18056800	intron	Eip75B -	chr3L_4_18050001	chr3L_18050001	RAL-887
1461	chr3L	18506117	18506156	chr3L	18509600	18509639	F-element	9	3479	4.0	2.0	3.0	2.2	3522	chr3L	18506117	intergenic	not near genes	chr3L	18507878	intergenic	not near genes	chr3L	18509639	intergenic	not near genes	chr3L_9_18505001	chr3L_18505001	RAL-887
1462	chr3L	18528610	18528655	chr3L	18537790	18537836	roo	10	9179	3.0	1.5	2.2	3.1	9226	chr3L	18528610	intergenic	not near genes	chr3L	18533223	intergenic	not near genes	chr3L	18537836	intergenic	not near genes	chr3L_10_18530001	chr3L_18530001	RAL-887
1467	chr3L	18593931	18593962	chr3L	18595931	18595962	Doc	6	2000	5.5	1.0	3.2	1.4	2031	chr3L	18593931	intergenic	term -	chr3L	18594946	intergenic	not near genes	chr3L	18595962	intergenic	CR45389 +	chr3L_6_18590001	chr3L_18590001	RAL-887
1471	chr3L	18710745	18710788	chr3L	18718710	18718760	Stalker2	8	7964	2.0	4.5	3.2	1.9	8015	chr3L	18710745	intergenic	not near genes	chr3L	18714752	intergenic	not near genes	chr3L	18718760	intergenic	not near genes	chr3L_8_18710001	chr3L_18710001	RAL-887
1475	chr3L	18772392	18772436	chr3L	18781093	18781099	roo	10	8697	5.0	2.5	3.8	2.1	8707	chr3L	18772392	intron	ftz-f1 -	chr3L	18776746	intron	ftz-f1 -	chr3L	18781099	intron	ftz-f1 -	chr3L_10_18775001	chr3L_18775001	RAL-887
1479	chr3L	18833777	18833801	chr3L	18834941	18834984	1360	5	1172	2.5	2.0	2.2	1.6	1207	chr3L	18833777	intron	Indy -	chr3L	18834380	intron	Indy -	chr3L	18834984	intron	Indy -	chr3L_5_18830001	chr3L_18830001	RAL-887
1488	chr3L	19008812	19008874	chr3L	19009175	19009187	jockey	13	354	1.0	6.0	3.5	2.9	375	chr3L	19008812	intron	nkd -	chr3L	19009000	intron	nkd -	chr3L	19009187	intron	nkd -	chr3L_13_19005001	chr3L_19005001	RAL-887
1492	chr3L	19117029	19117076	chr3L	19124488	19124527	mdg1	15	7461	7.0	4.0	5.5	2.3	7498	chr3L	19117029	intron	CG14082 -	chr3L	19120778	intron	CG14082 -	chr3L	19124527	intron	CG14082 -	chr3L_15_19120001	chr3L_19120001	RAL-887
1495	chr3L	19208040	19208090	chr3L	19209433	19209484	Doc	16	1388	2.5	2.5	2.5	4.6	1444	chr3L	19208040	intron	fz2 -	chr3L	19208762	intron	fz2 -	chr3L	19209484	intron	fz2 -	chr3L_16_19205001	chr3L_19205001	RAL-887
1508	chr3L	19848506	19848535	chr3L	19857716	19857744	roo	8	9209	4.5	4.0	4.2	1.5	9238	chr3L	19848506	intron	Papss +	chr3L	19853125	intron	Papss +	chr3L	19857744	intron	Papss +	chr3L_8_19850001	chr3L_19850001	RAL-887
1509	chr3L	19861802	19861851	chr3L	19863610	19863649	S-element	13	1805	5.0	4.5	4.8	2.2	1847	chr3L	19861802	5` UTR	CR45433 +	chr3L	19862726	intergenic	not near genes	chr3L	19863649	intergenic	not near genes	chr3L_13_19860001	chr3L_19860001	RAL-887
1517	chr3L	20113647	20113686	chr3L	20122923	20122930	roo	5	9270	2.5	4.0	3.2	1.2	9283	chr3L	20113647	intergenic	not near genes	chr3L	20118288	intergenic	not near genes	chr3L	20122930	intergenic	not near genes	chr3L_5_20115001	chr3L_20115001	RAL-887
1523	chr3L	20257314	20257362	chr3L	20258454	20258501	pogo	14	1138	3.5	7.5	5.5	2.2	1187	chr3L	20257314	intron	rdgC +	chr3L	20257908	intron	rdgC +	chr3L	20258501	intron	rdgC +	chr3L_14_20255001	chr3L_20255001	RAL-887
1528	chr3L	20476736	20476783	chr3L	20484353	20484402	springer	15	7617	3.5	4.0	3.8	3.1	7666	chr3L	20476736	3` UTR	isoQC +	chr3L	20480569	intergenic	not near genes	chr3L	20484402	3` UTR	ZnT77C -	chr3L_15_20480001	chr3L_20480001	RAL-887
1532	chr3L	20821274	20821305	chr3L	20824763	20824777	NOF	8	3486	4.5	7.0	5.8	1.2	3503	chr3L	20821274	intron	Pka-R1 +	chr3L	20823026	intron	Pka-R1 +	chr3L	20824777	intron	Pka-R1 +	chr3L_8_20820001	chr3L_20820001	RAL-887
1538	chr3L	21014904	21014943	chr3L	21023394	21023426	Tirant	4	8484	4.5	4.5	4.5	0.7	8522	chr3L	21014904	intron	skd -	chr3L	21019165	intron	skd -	chr3L	21023426	intron	skd -	chr3L_4_21015001	chr3L_21015001	RAL-887
1541	chr3L	21151848	21151881	chr3L	21156951	21156984	flea	10	5104	4.0	2.5	3.2	2.4	5136	chr3L	21151848	intron	Ac78C -	chr3L	21154416	intron	Ac78C -	chr3L	21156984	intron	Ac78C -	chr3L_10_21150001	chr3L_21150001	RAL-887
1548	chr3L	21498843	21498860	chr3L	21500480	21500509	1360	5	1648	5.5	3.0	4.2	1.0	1666	chr3L	21498843	intron	Glg1 -	chr3L	21499676	intron	Glg1 -	chr3L	21500509	intron	Glg1 -	chr3L_5_21495001	chr3L_21495001	RAL-887
1562	chr3L	22099681	22099707	chr3L	22105871	22105876	3S18	12	6197	2.5	3.0	2.8	3.2	6195	chr3L	22099681	intergenic	not near genes	chr3L	22102778	intergenic	not near genes	chr3L	22105876	intergenic	not near genes	chr3L_12_22100001	chr3L_22100001	RAL-887
1567	chr3L	22555782	22555795	chr3L	22563243	22563283	blood	6	7482	3.0	1.0	2.0	2.0	7501	chr3L	22555782	intergenic	not near genes	chr3L	22559532	intergenic	not near genes	chr3L	22563283	intergenic	not near genes	chr3L_6_22555001	chr3L_22555001	RAL-887
1569	chr3L	22577626	22577631	chr3L	22582426	22582438	Doc	5	4804	3.0	8.0	5.5	0.8	4812	chr3L	22577626	intergenic	not near genes	chr3L	22580032	intergenic	not near genes	chr3L	22582438	3` UTR	CG14459 -	chr3L_5_22580001	chr3L_22580001	RAL-887
1570	chr3L	22577636	22577647	chr3L	22582419	22582448	Doc	6	4797	2.5	8.0	5.2	1.0	4812	chr3L	22577636	intergenic	not near genes	chr3L	22580042	intergenic	not near genes	chr3L	22582448	3` UTR	CG14459 -	chr3L_6_22580001	chr3L_22580001	RAL-887
1571	chr3L	22617176	22617218	chr3L	22624641	22624689	blood	11	7468	2.5	4.5	3.5	2.4	7513	chr3L	22617176	intron	CG14459 -	chr3L	22620932	intron	CG14459 -	chr3L	22624689	intron	CG14459 -	chr3L_11_22620001	chr3L_22620001	RAL-887
1574	chr3L	22761381	22761384	chr3L	22766824	22766836	Ivk	4	5451	6.5	5.5	6.0	0.6	5455	chr3L	22761381	intron	SPoCk +	chr3L	22764108	intron	SPoCk +	chr3L	22766836	intron	SPoCk +	chr3L_4_22760001	chr3L_22760001	RAL-887
1575	chr3L	22761387	22761414	chr3L	22766820	22766868	Ivk	9	5449	3.5	3.5	3.5	2.0	5481	chr3L	22761387	intron	SPoCk +	chr3L	22764128	intron	SPoCk +	chr3L	22766868	intron	SPoCk +	chr3L_9_22760001	chr3L_22760001	RAL-887
1579	chr3L	22865971	22866008	chr3L	22867124	22867161	Doc	18	1148	6.0	6.0	6.0	2.6	1190	chr3L	22865971	intron	CG33170 +	chr3L	22866566	intron	CG33170 +	chr3L	22867161	intron	CG33170 +	chr3L_18_22865001	chr3L_22865001	RAL-887
1583	chr3L	22989845	22989894	chr3L	22996838	22996880	297	6	6992	0.5	4.0	2.2	1.9	7035	chr3L	22989845	intergenic	not near genes	chr3L	22993362	intergenic	not near genes	chr3L	22996880	intergenic	not near genes	chr3L_6_22990001	chr3L_22990001	RAL-887
1584	chr3L	23042211	23042229	chr3L	23048984	23048998	gypsy6	5	6772	15.0	4.5	9.8	0.5	6787	chr3L	23042211	intergenic	not near genes	chr3L	23045604	intergenic	not near genes	chr3L	23048998	intergenic	not near genes	chr3L_5_23045001	chr3L_23045001	RAL-887
1585	chr3L	23042232	23042250	chr3L	23048978	23049002	gypsy6	16	6764	7.5	2.5	5.0	2.7	6770	chr3L	23042232	intergenic	not near genes	chr3L	23045617	intergenic	not near genes	chr3L	23049002	intergenic	not near genes	chr3L_16_23045001	chr3L_23045001	RAL-887
1590	chr3L	24012399	24012435	chr3L	24020760	24020796	roo	9	8360	2.0	5.5	3.8	1.9	8397	chr3L	24012399	intergenic	not near genes	chr3L	24016598	intergenic	not near genes	chr3L	24020796	intergenic	not near genes	chr3L_9_24015001	chr3L_24015001	RAL-887
1591	chr3L	24168622	24168634	chr3L	24176397	24176411	ZAM	4	7778	6.0	3.0	4.5	0.7	7789	chr3L	24168622	intron	Snap25 +	chr3L	24172516	intron	Snap25 +	chr3L	24176411	intron	Snap25 +	chr3L_4_24170001	chr3L_24170001	RAL-887
1600	chr3R	2446796	2446804	chr3R	2449025	2449065	1360	4	2240	39.5	41.0	40.2	0.1	2269	chr3R	2446796	intergenic	not near genes	chr3R	2447930	intergenic	not near genes	chr3R	2449065	intergenic	not near genes	chr3R_4_2445001	chr3R_2445001	RAL-887
1605	chr3R	4206050	4206102	chr3R	4211644	4211697	mdg3	10	5589	3.5	4.0	3.8	2.1	5647	chr3R	4206050	intron	CG14636 -	chr3R	4208874	intron	CG14636 -	chr3R	4211697	intron	CG14636 -	chr3R_10_4205001	chr3R_4205001	RAL-887
1606	chr3R	4366765	4366780	chr3R	4375139	4375183	roo	7	8396	3.0	2.0	2.5	2.0	8418	chr3R	4366765	3` UTR	CG1090 +	chr3R	4370974	intergenic	not near genes	chr3R	4375183	5` UTR	CR44922 +	chr3R_7_4370001	chr3R_4370001	RAL-887
1607	chr3R	4408405	4408437	chr3R	4412715	4412761	Juan	8	4320	4.5	4.0	4.2	1.5	4356	chr3R	4408405	intron	CG32944 -	chr3R	4410583	intron	CG32944 -	chr3R	4412761	intron	CG32944 -	chr3R_8_4410001	chr3R_4410001	RAL-887
1614	chr3R	4887469	4887488	chr3R	4894865	4894885	rover	5	7396	8.0	5.0	6.5	0.7	7416	chr3R	4887469	intergenic	not near genes	chr3R	4891177	intergenic	not near genes	chr3R	4894885	intergenic	not near genes	chr3R_5_4890001	chr3R_4890001	RAL-887
1615	chr3R	4887496	4887512	chr3R	4894861	4894884	rover	5	7384	3.5	4.5	4.0	1.0	7388	chr3R	4887496	intergenic	not near genes	chr3R	4891190	intergenic	not near genes	chr3R	4894884	intergenic	not near genes	chr3R_5_4890001	chr3R_4890001	RAL-887
1620	chr3R	5045845	5045872	chr3R	5052967	5052992	HMS-Beagle	5	7121	2.0	1.0	1.5	2.0	7147	chr3R	5045845	intron	CR43635 -	chr3R	5049418	intergenic	not near genes	chr3R	5052992	intergenic	CR45588 -	chr3R_5_5045001	chr3R_5045001	RAL-887
1621	chr3R	5067960	5068014	chr3R	5073497	5073551	mdg3	16	5533	4.5	1.5	3.0	4.0	5591	chr3R	5067960	intergenic	not near genes	chr3R	5070756	intergenic	not near genes	chr3R	5073551	intergenic	not near genes	chr3R_16_5070001	chr3R_5070001	RAL-887
1624	chr3R	5338391	5338426	chr3R	5343569	5343619	Rt1c	14	5189	4.5	7.0	5.8	2.1	5228	chr3R	5338391	intron	mtd -	chr3R	5341005	intron	mtd -	chr3R	5343619	intron	mtd -	chr3R_14_5340001	chr3R_5340001	RAL-887
1627	chr3R	5445950	5445975	chr3R	5452430	5452455	Burdock	8	6479	4.0	4.5	4.2	1.5	6505	chr3R	5445950	intron	CG14669 +	chr3R	5449202	intron	CG14669 +	chr3R	5452455	intron	CG14669 +	chr3R_8_5445001	chr3R_5445001	RAL-887
1628	chr3R	5445976	5445992	chr3R	5452421	5452458	Burdock	5	6470	3.0	3.5	3.2	1.2	6482	chr3R	5445976	intron	CG14669 +	chr3R	5449217	intron	CG14669 +	chr3R	5452458	intron	CG14669 +	chr3R_5_5445001	chr3R_5445001	RAL-887
1632	chr3R	5746002	5746046	chr3R	5746262	5746306	pogo	12	260	4.0	5.0	4.5	2.2	304	chr3R	5746002	3` UTR	Madm +	chr3R	5746154	3` UTR	Madm +	chr3R	5746306	3` UTR	Madm +	chr3R_12_5745001	chr3R_5745001	RAL-887
1633	chr3R	5746996	5747041	chr3R	5753206	5753251	diver	6	6210	2.5	3.5	3.0	1.5	6255	chr3R	5746996	intergenic	Madm +	chr3R	5750124	intergenic	not near genes	chr3R	5753251	intergenic	CG2091 -	chr3R_6_5750001	chr3R_5750001	RAL-887
1634	chr3R	5809096	5809144	chr3R	5809355	5809404	pogo	9	258	4.5	3.5	4.0	1.8	308	chr3R	5809096	3` UTR	CG11000 +	chr3R	5809250	3` UTR	CG11000 +	chr3R	5809404	3` UTR	CG11000 +	chr3R_9_5805001	chr3R_5805001	RAL-887
1635	chr3R	5927572	5927589	chr3R	5927799	5927845	pogo	5	246	2.5	5.5	4.0	1.0	273	chr3R	5927572	intron	CG34113 -	chr3R	5927708	intron	CG34113 -	chr3R	5927845	intron	CG34113 -	chr3R_5_5925001	chr3R_5925001	RAL-887
1638	chr3R	6015945	6015987	chr3R	6024441	6024487	Tirant	9	8495	3.0	2.5	2.8	2.4	8542	chr3R	6015945	intergenic	not near genes	chr3R	6020216	intergenic	not near genes	chr3R	6024487	intergenic	not near genes	chr3R_9_6020001	chr3R_6020001	RAL-887
1641	chr3R	6175152	6175202	chr3R	6182444	6182494	HMS-Beagle2	11	7288	3.5	1.5	2.5	3.1	7342	chr3R	6175152	intergenic	Osi1 +	chr3R	6178823	intron	CR45194 +	chr3R	6182494	intergenic	CR45194 +	chr3R_11_6175001	chr3R_6175001	RAL-887
1644	chr3R	6206278	6206316	chr3R	6206498	6206506	BS	12	224	4.0	4.5	4.2	2.3	228	chr3R	6206278	exon	Osi24 +	chr3R	6206392	intron	Osi24 +	chr3R	6206506	intron	Osi24 +	chr3R_12_6205001	chr3R_6205001	RAL-887
1647	chr3R	6510007	6510017	chr3R	6515108	6515118	jockey	4	5101	5.0	3.5	4.2	0.8	5111	chr3R	6510007	intergenic	not near genes	chr3R	6512562	intergenic	not near genes	chr3R	6515118	intergenic	not near genes	chr3R_4_6510001	chr3R_6510001	RAL-887
1648	chr3R	6510018	6510044	chr3R	6515107	6515145	jockey	4	5089	2.5	3.5	3.0	1.0	5127	chr3R	6510018	intergenic	not near genes	chr3R	6512582	intergenic	not near genes	chr3R	6515145	intergenic	not near genes	chr3R_4_6510001	chr3R_6510001	RAL-887
1654	chr3R	6737481	6737517	chr3R	6739288	6739324	Doc	11	1804	7.0	3.0	5.0	1.8	1843	chr3R	6737481	intron	pb -	chr3R	6738402	intron	pb -	chr3R	6739324	intron	pb -	chr3R_11_6735001	chr3R_6735001	RAL-887
1666	chr3R	7694588	7694594	chr3R	7713669	7713676	invader3	6	19081	3.5	5.0	4.2	1.2	19088	chr3R	7694588	3` UTR	Nlg1 +	chr3R	7704132	intergenic	not near genes	chr3R	7713676	intergenic	not near genes	chr3R_6_7700001	chr3R_7700001	RAL-887
1668	chr3R	7729448	7729497	chr3R	7737406	7737451	Stalker2	13	7954	5.0	5.5	5.2	2.1	8003	chr3R	7729448	intergenic	not near genes	chr3R	7733450	intergenic	not near genes	chr3R	7737451	intergenic	not near genes	chr3R_13_7730001	chr3R_7730001	RAL-887
1674	chr3R	8090548	8090569	chr3R	8094044	8094065	297	4	3496	5.5	10.5	8.0	0.4	3517	chr3R	8090548	intergenic	CR44330 +	chr3R	8092306	intergenic	not near genes	chr3R	8094065	intergenic	CG7900 +	chr3R_4_8090001	chr3R_8090001	RAL-887
1675	chr3R	8094417	8094434	chr3R	8099742	8099759	Transpac	6	5325	5.0	2.0	3.5	1.3	5342	chr3R	8094417	intron	CG7900 +	chr3R	8097088	intron	CG7900 +	chr3R	8099759	intron	CG7900 +	chr3R_6_8095001	chr3R_8095001	RAL-887
1676	chr3R	8101748	8101782	chr3R	8104852	8104866	G2	7	3099	4.5	3.0	3.8	1.5	3118	chr3R	8101748	exon	CG7900 +	chr3R	8103307	intron	CG7900 +	chr3R	8104866	3` UTR	CG7900 +	chr3R_7_8100001	chr3R_8100001	RAL-887
1679	chr3R	8207568	8207584	chr3R	8208401	8208448	F-element	6	851	4.0	3.5	3.8	1.2	880	chr3R	8207568	intergenic	not near genes	chr3R	8208008	intergenic	not near genes	chr3R	8208448	intergenic	not near genes	chr3R_6_8205001	chr3R_8205001	RAL-887
1681	chr3R	8402995	8403031	chr3R	8412173	8412212	roo	11	9181	1.0	4.5	2.8	2.9	9217	chr3R	8402995	intron	CG45263 -	chr3R	8407604	intron	CG45263 -	chr3R	8412212	intron	CG45263 -	chr3R_11_8405001	chr3R_8405001	RAL-887
1683	chr3R	8570467	8570499	chr3R	8575123	8575153	HMS-Beagle	11	4654	0.5	6.0	3.2	2.6	4686	chr3R	8570467	intergenic	not near genes	chr3R	8572810	intergenic	not near genes	chr3R	8575153	intergenic	not near genes	chr3R_11_8570001	chr3R_8570001	RAL-887
1685	chr3R	8601756	8601792	chr3R	8610929	8610965	roo	10	9169	5.0	6.0	5.5	1.5	9209	chr3R	8601756	intron	5-HT2B +	chr3R	8606360	intron	5-HT2B +	chr3R	8610965	intron	5-HT2B +	chr3R_10_8605001	chr3R_8605001	RAL-887
1686	chr3R	8707348	8707381	chr3R	8709809	8709841	jockey	9	2455	2.5	6.0	4.2	1.7	2493	chr3R	8707348	intergenic	not near genes	chr3R	8708594	intergenic	not near genes	chr3R	8709841	intergenic	not near genes	chr3R_9_8705001	chr3R_8705001	RAL-887
1689	chr3R	8894854	8894900	chr3R	8896030	8896072	1360	11	1175	3.0	7.0	5.0	1.8	1218	chr3R	8894854	intron	pyd -	chr3R	8895463	intron	pyd -	chr3R	8896072	intron	pyd -	chr3R_11_8895001	chr3R_8895001	RAL-887
1700	chr3R	9278771	9278803	chr3R	9284046	9284080	Rt1a	7	5271	1.5	6.0	3.8	1.5	5309	chr3R	9278771	intergenic	not near genes	chr3R	9281426	intergenic	not near genes	chr3R	9284080	intergenic	not near genes	chr3R_7_9280001	chr3R_9280001	RAL-887
1703	chr3R	9319571	9319588	chr3R	9320026	9320043	jockey	6	454	6.0	6.0	6.0	0.9	472	chr3R	9319571	intron	CG8861 -	chr3R	9319807	intron	CG8861 -	chr3R	9320043	intron	CG8861 -	chr3R_6_9315001	chr3R_9315001	RAL-887
1704	chr3R	9361812	9361843	chr3R	9362072	9362104	pogo	7	258	0.0	4.5	2.2	2.2	292	chr3R	9361812	3` UTR	CG45050 +	chr3R	9361958	3` UTR	CG45050 +	chr3R	9362104	3` UTR	CG45050 +	chr3R_7_9360001	chr3R_9360001	RAL-887
1714	chr3R	9699962	9700003	chr3R	9700069	9700112	1360	12	107	5.0	8.0	6.5	1.6	150	chr3R	9699962	intron	Unc-115a -	chr3R	9700037	intron	Unc-115a -	chr3R	9700112	intron	Unc-115a -	chr3R_12_9700001	chr3R_9700001	RAL-887
1718	chr3R	10231764	10231815	chr3R	10237361	10237404	mdg3	12	5590	2.5	4.0	3.2	2.9	5640	chr3R	10231764	intron	CG42795 +	chr3R	10234584	intron	CG42795 +	chr3R	10237404	intron	CG42795 +	chr3R_12_10230001	chr3R_10230001	RAL-887
1719	chr3R	10255363	10255380	chr3R	10260823	10260840	I-element	6	5460	5.5	4.5	5.0	1.0	5477	chr3R	10255363	3` UTR	Sirt6 -	chr3R	10258102	intron	Sirt6 -	chr3R	10260840	exon	Sirt6 -	chr3R_6_10255001	chr3R_10255001	RAL-887
1724	chr3R	10804154	10804196	chr3R	10811706	10811748	17.6	4	7552	1.5	3.5	2.5	1.1	7594	chr3R	10804154	intergenic	CG14692 -	chr3R	10807951	intergenic	not near genes	chr3R	10811748	3` UTR	CG14693 -	chr3R_4_10805001	chr3R_10805001	RAL-887
1733	chr3R	10957844	10957882	chr3R	10963253	10963275	Rt1c	4	5400	5.5	4.0	4.8	0.7	5431	chr3R	10957844	intergenic	not near genes	chr3R	10960560	intergenic	not near genes	chr3R	10963275	intergenic	not near genes	chr3R_4_10960001	chr3R_10960001	RAL-887
1746	chr3R	11379215	11379268	chr3R	11388390	11388411	roo	10	9167	5.5	3.5	4.5	1.8	9196	chr3R	11379215	intron	pros +	chr3R	11383813	intron	pros +	chr3R	11388411	intron	pros +	chr3R_10_11380001	chr3R_11380001	RAL-887
1751	chr3R	11841045	11841092	chr3R	11846254	11846303	BS	11	5210	4.0	8.0	6.0	1.6	5258	chr3R	11841045	intron	CG6959 -	chr3R	11843674	intron	CG6959 -	chr3R	11846303	intron	CG6959 -	chr3R_11_11840001	chr3R_11840001	RAL-887
1755	chr3R	11957836	11957869	chr3R	11958138	11958172	S-element	6	303	3.0	0.0	1.5	2.4	336	chr3R	11957836	intergenic	not near genes	chr3R	11958004	intergenic	not near genes	chr3R	11958172	intergenic	not near genes	chr3R_6_11955001	chr3R_11955001	RAL-887
1756	chr3R	12022871	12022911	chr3R	12025068	12025108	pogo	12	2192	3.0	8.0	5.5	1.8	2237	chr3R	12022871	intergenic	not near genes	chr3R	12023990	intergenic	not near genes	chr3R	12025108	intergenic	not near genes	chr3R_12_12020001	chr3R_12020001	RAL-887
1769	chr3R	12864556	12864581	chr3R	12865061	12865086	roo	4	505	1.0	2.5	1.8	1.4	530	chr3R	12864556	intergenic	not near genes	chr3R	12864821	intergenic	not near genes	chr3R	12865086	intergenic	not near genes	chr3R_4_12860001	chr3R_12860001	RAL-887
1774	chr3R	12920143	12920171	chr3R	12925356	12925394	copia	8	5219	6.0	2.0	4.0	1.6	5251	chr3R	12920143	intron	beat-Vb +	chr3R	12922768	intron	beat-Vb +	chr3R	12925394	intron	beat-Vb +	chr3R_8_12920001	chr3R_12920001	RAL-887
1782	chr3R	13135823	13135838	chr3R	13138008	13138020	pogo	4	2183	5.0	2.5	3.8	0.8	2197	chr3R	13135823	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13136922	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13138020	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_4_13135001	chr3R_13135001	RAL-887
1783	chr3R	13143012	13143060	chr3R	13148609	13148628	mdg3	9	5583	4.0	3.5	3.8	1.9	5616	chr3R	13143012	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13145820	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13148628	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_9_13145001	chr3R_13145001	RAL-887
1804	chr3R	14021642	14021675	chr3R	14023471	14023512	S-element	11	1827	6.0	3.0	4.5	2.0	1870	chr3R	14021642	intron	rdx -	chr3R	14022577	intron	rdx -	chr3R	14023512	intron	rdx -	chr3R_11_14020001	chr3R_14020001	RAL-887
1808	chr3R	14180799	14180811	chr3R	14185583	14185592	F-element	6	4784	4.5	0.0	2.2	1.9	4793	chr3R	14180799	intron	Dop1R1 -	chr3R	14183196	intron	Dop1R1 -	chr3R	14185592	intron	Dop1R1 -	chr3R_6_14180001	chr3R_14180001	RAL-887
1809	chr3R	14246378	14246392	chr3R	14247892	14247908	jockey	5	1513	5.5	5.0	5.2	0.8	1530	chr3R	14246378	intergenic	not near genes	chr3R	14247143	intergenic	not near genes	chr3R	14247908	intergenic	not near genes	chr3R_5_14245001	chr3R_14245001	RAL-887
1828	chr3R	15041398	15041414	chr3R	15045198	15045216	Doc	4	3802	0.0	3.5	1.8	1.4	3818	chr3R	15041398	intergenic	not near genes	chr3R	15043307	intergenic	not near genes	chr3R	15045216	intergenic	not near genes	chr3R_4_15040001	chr3R_15040001	RAL-887
1830	chr3R	15079808	15079827	chr3R	15080049	15080086	pogo	6	255	6.0	1.5	3.8	1.2	278	chr3R	15079808	3` UTR	CG6966 -	chr3R	15079947	3` UTR	CG6966 -	chr3R	15080086	3` UTR	CG6966 -	chr3R_6_15075001	chr3R_15075001	RAL-887
1834	chr3R	15132048	15132062	chr3R	15135128	15135142	Juan	4	3076	10.0	7.5	8.8	0.4	3094	chr3R	15132048	intergenic	CG42788 -	chr3R	15133595	intergenic	not near genes	chr3R	15135142	3` UTR	CG6912 -	chr3R_4_15130001	chr3R_15130001	RAL-887
1845	chr3R	15601180	15601193	chr3R	15608687	15608734	412	8	7532	6.0	5.5	5.8	1.2	7554	chr3R	15601180	intergenic	not near genes	chr3R	15604957	intergenic	not near genes	chr3R	15608734	intergenic	not near genes	chr3R_8_15600001	chr3R_15600001	RAL-887
1846	chr3R	15618712	15618763	chr3R	15626203	15626250	blood	7	7492	2.0	4.5	3.2	1.7	7538	chr3R	15618712	intergenic	not near genes	chr3R	15622481	intergenic	not near genes	chr3R	15626250	intergenic	not near genes	chr3R_7_15620001	chr3R_15620001	RAL-887
1868	chr3R	16756301	16756345	chr3R	16762511	16762556	diver	10	6204	1.5	1.0	1.2	4.5	6255	chr3R	16756301	intron	bxd -	chr3R	16759428	intron	bxd -	chr3R	16762556	intron	bxd -	chr3R_10_16755001	chr3R_16755001	RAL-887
1887	chr3R	17591282	17591312	chr3R	17591738	17591760	F-element	5	452	2.0	4.0	3.0	1.2	478	chr3R	17591282	intergenic	not near genes	chr3R	17591521	intergenic	not near genes	chr3R	17591760	intergenic	not near genes	chr3R_5_17590001	chr3R_17590001	RAL-887
1895	chr3R	17925864	17925888	chr3R	17927320	17927355	hobo	7	1469	5.0	6.5	5.8	1.0	1491	chr3R	17925864	intron	cpo +	chr3R	17926610	intron	cpo +	chr3R	17927355	intron	cpo +	chr3R_7_17925001	chr3R_17925001	RAL-887
1915	chr3R	19136408	19136430	chr3R	19139775	19139796	Bari1	5	3368	48.5	15.0	31.8	0.2	3388	chr3R	19136408	exon	Cyp12a4 +	chr3R	19138102	intergenic	not near genes	chr3R	19139796	3` UTR	Ppcs -	chr3R_5_19135001	chr3R_19135001	RAL-887
1937	chr3R	20109548	20109571	chr3R	20114743	20114772	copia	5	5213	3.0	4.0	3.5	1.1	5224	chr3R	20109548	intergenic	not near genes	chr3R	20112160	intergenic	not near genes	chr3R	20114772	intergenic	CG10887 +	chr3R_5_20110001	chr3R_20110001	RAL-887
1939	chr3R	20156679	20156719	chr3R	20165868	20165909	roo	10	9187	4.5	4.0	4.2	1.9	9230	chr3R	20156679	intergenic	not near genes	chr3R	20161294	intergenic	not near genes	chr3R	20165909	intergenic	not near genes	chr3R_10_20160001	chr3R_20160001	RAL-887
1943	chr3R	20245267	20245305	chr3R	20248898	20248935	F-element	4	3630	2.0	2.0	2.0	1.3	3668	chr3R	20245267	3` UTR	Nlg4 +	chr3R	20247101	intergenic	not near genes	chr3R	20248935	intergenic	not near genes	chr3R_4_20245001	chr3R_20245001	RAL-887
1946	chr3R	20266510	20266543	chr3R	20273000	20273034	Burdock	5	6489	2.5	4.5	3.5	1.1	6524	chr3R	20266510	intron	cic +	chr3R	20269772	intron	cic +	chr3R	20273034	intron	cic +	chr3R_5_20265001	chr3R_20265001	RAL-887
1948	chr3R	20331002	20331018	chr3R	20331508	20331524	roo	4	506	2.5	1.5	2.0	1.3	522	chr3R	20331002	intergenic	Sirt2 +	chr3R	20331263	intergenic	Sirt2 +	chr3R	20331524	intergenic	not near genes	chr3R_4_20330001	chr3R_20330001	RAL-887
1961	chr3R	20854502	20854519	chr3R	20859269	20859275	Doc	5	4770	8.0	5.0	6.5	0.7	4773	chr3R	20854502	intron	Ir93a -	chr3R	20856888	intron	Ir93a -	chr3R	20859275	exon	Ir93a -	chr3R_5_20855001	chr3R_20855001	RAL-887
1966	chr3R	21141662	21141700	chr3R	21150161	21150184	Tirant	6	8493	7.0	4.0	5.5	0.9	8522	chr3R	21141662	intron	SNF4Agamma +	chr3R	21145923	intron	SNF4Agamma +	chr3R	21150184	intron	SNF4Agamma +	chr3R_6_21145001	chr3R_21145001	RAL-887
1981	chr3R	21761110	21761126	chr3R	21768512	21768538	mdg1	5	7400	8.0	3.5	5.8	0.7	7428	chr3R	21761110	exon	CG42335 +	chr3R	21764824	intron	CG42335 +	chr3R	21768538	exon	CG42335 +	chr3R_5_21760001	chr3R_21760001	RAL-887
1995	chr3R	22239471	22239516	chr3R	22248551	22248584	roo	5	9075	5.0	0.0	2.5	1.4	9113	chr3R	22239471	intron	SKIP +	chr3R	22244028	intron	SKIP +	chr3R	22248584	intron	SKIP +	chr3R_5_22240001	chr3R_22240001	RAL-887
1998	chr3R	22450526	22450553	chr3R	22453186	22453213	NOF	10	2657	5.5	5.5	5.5	1.5	2687	chr3R	22450526	intron	CG34376 +	chr3R	22451870	intron	CG34376 +	chr3R	22453213	intron	CG34376 +	chr3R_10_22450001	chr3R_22450001	RAL-887
2006	chr3R	22881183	22881214	chr3R	22884905	22884936	Doc	9	3723	4.0	5.0	4.5	1.6	3753	chr3R	22881183	intergenic	not near genes	chr3R	22883060	intergenic	not near genes	chr3R	22884936	intergenic	not near genes	chr3R_9_22880001	chr3R_22880001	RAL-887
2021	chr3R	23558378	23558428	chr3R	23560179	23560228	Bari1	14	1800	1.5	2.0	1.8	5.0	1850	chr3R	23558378	intron	beat-IV +	chr3R	23559303	intron	beat-IV +	chr3R	23560228	intron	beat-IV +	chr3R_14_23555001	chr3R_23555001	RAL-887
2023	chr3R	23684678	23684726	chr3R	23685180	23685232	roo	11	493	2.5	4.5	3.5	2.4	554	chr3R	23684678	exon	CG18754 +	chr3R	23684955	intron	CG18754 +	chr3R	23685232	exon	CG18754 +	chr3R_11_23680001	chr3R_23680001	RAL-887
2026	chr3R	23835391	23835430	chr3R	23844561	23844600	roo	8	9169	5.0	3.0	4.0	1.6	9209	chr3R	23835391	intron	CG34355 +	chr3R	23839996	intron	CG34355 +	chr3R	23844600	intron	CG34355 +	chr3R_8_23835001	chr3R_23835001	RAL-887
2027	chr3R	23851070	23851089	chr3R	23858756	23858776	opus	5	7687	1.5	4.0	2.8	1.3	7706	chr3R	23851070	3` UTR	CG34355 +	chr3R	23854923	intergenic	not near genes	chr3R	23858776	intergenic	not near genes	chr3R_5_23850001	chr3R_23850001	RAL-887
2037	chr3R	24072069	24072112	chr3R	24072526	24072549	jockey	8	446	3.5	8.0	5.8	1.2	480	chr3R	24072069	intron	4EHP -	chr3R	24072309	intron	4EHP -	chr3R	24072549	intron	4EHP -	chr3R_8_24070001	chr3R_24070001	RAL-887
2038	chr3R	24076928	24076944	chr3R	24078379	24078406	hobo	6	1474	2.5	3.5	3.0	1.5	1478	chr3R	24076928	intron	4EHP -	chr3R	24077667	intron	4EHP -	chr3R	24078406	intron	4EHP -	chr3R_6_24075001	chr3R_24075001	RAL-887
2040	chr3R	24207205	24207238	chr3R	24212301	24212325	flea	10	5094	6.0	10.5	8.2	1.1	5120	chr3R	24207205	intron	twin -	chr3R	24209765	intron	twin -	chr3R	24212325	intron	twin -	chr3R_10_24205001	chr3R_24205001	RAL-887
2047	chr3R	24493282	24493308	chr3R	24493530	24493551	BS	5	245	7.0	8.5	7.8	0.6	269	chr3R	24493282	intergenic	not near genes	chr3R	24493416	intergenic	not near genes	chr3R	24493551	intergenic	not near genes	chr3R_5_24490001	chr3R_24490001	RAL-887
2059	chr3R	24927141	24927149	chr3R	24931912	24931960	Doc	4	4798	3.0	1.5	2.2	1.2	4819	chr3R	24927141	intergenic	Trf4-2 +	chr3R	24929550	intergenic	not near genes	chr3R	24931960	intergenic	CG11771 +	chr3R_4_24925001	chr3R_24925001	RAL-887
2075	chr3R	25725812	25725861	chr3R	25734992	25735004	roo	4	9171	1.0	1.0	1.0	2.0	9192	chr3R	25725812	intron	LpR2 -	chr3R	25730408	intron	LpR2 -	chr3R	25735004	intron	LpR2 -	chr3R_4_25730001	chr3R_25730001	RAL-887
2076	chr3R	25832683	25832721	chr3R	25841885	25841922	roo	8	9198	2.5	7.0	4.8	1.4	9239	chr3R	25832683	exon	alpha4GT2 +	chr3R	25837302	intron	alpha4GT2 +	chr3R	25841922	exon	alpha4GT2 +	chr3R_8_25835001	chr3R_25835001	RAL-887
2102	chr3R	26376304	26376347	chr3R	26385484	26385490	roo	9	9174	4.5	0.5	2.5	2.6	9186	chr3R	26376304	intergenic	not near genes	chr3R	26380897	intergenic	not near genes	chr3R	26385490	intergenic	not near genes	chr3R_9_26380001	chr3R_26380001	RAL-887
2103	chr3R	26558311	26558356	chr3R	26565641	26565687	Stalker4	11	7325	4.0	4.0	4.0	2.2	7376	chr3R	26558311	intron	scrib +	chr3R	26561999	intron	scrib +	chr3R	26565687	intron	scrib +	chr3R_11_26560001	chr3R_26560001	RAL-887
2105	chr3R	26642713	26642751	chr3R	26643126	26643165	jockey	4	414	5.5	1.0	3.2	1.0	452	chr3R	26642713	intergenic	not near genes	chr3R	26642939	intergenic	not near genes	chr3R	26643165	intergenic	not near genes	chr3R_4_26640001	chr3R_26640001	RAL-887
2115	chr3R	26810535	26810584	chr3R	26811039	26811089	roo	12	501	2.0	2.5	2.2	3.8	554	chr3R	26810535	intron	Tl +	chr3R	26810812	intron	Tl +	chr3R	26811089	intron	Tl +	chr3R_12_26810001	chr3R_26810001	RAL-887
2117	chr3R	27007400	27007430	chr3R	27016549	27016585	roo	8	9153	3.0	7.0	5.0	1.3	9185	chr3R	27007400	intron	RYa-R +	chr3R	27011992	intron	RYa-R +	chr3R	27016585	intron	RYa-R +	chr3R_8_27010001	chr3R_27010001	RAL-887
2123	chr3R	27140510	27140548	chr3R	27148140	27148157	412	9	7625	2.0	4.5	3.2	2.1	7647	chr3R	27140510	intron	CG6051 -	chr3R	27144334	intron	CG6051 -	chr3R	27148157	intron	CG6051 -	chr3R_9_27140001	chr3R_27140001	RAL-887
2126	chr3R	27342783	27342826	chr3R	27351375	27351420	Tirant	14	8597	3.5	2.5	3.0	3.5	8637	chr3R	27342783	intron	CG42534 +	chr3R	27347102	intron	CG42534 +	chr3R	27351420	intron	CG42534 +	chr3R_14_27345001	chr3R_27345001	RAL-887
2143	chr3R	27856741	27856759	chr3R	27858244	27858262	hopper2	10	1502	11.0	5.5	8.2	1.1	1521	chr3R	27856741	intron	CG34353 -	chr3R	27857502	intron	CG34353 -	chr3R	27858262	intron	CG34353 -	chr3R_10_27855001	chr3R_27855001	RAL-887
2144	chr3R	27856770	27856785	chr3R	27858240	27858288	hopper2	8	1494	8.0	4.5	6.2	1.1	1518	chr3R	27856770	intron	CG34353 -	chr3R	27857529	intron	CG34353 -	chr3R	27858288	intron	CG34353 -	chr3R_8_27855001	chr3R_27855001	RAL-887
2145	chr3R	27862946	27862964	chr3R	27868261	27868288	Transpac	7	5320	8.5	4.5	6.5	0.9	5342	chr3R	27862946	intron	CG34353 -	chr3R	27865617	intron	CG34353 -	chr3R	27868288	intron	CG34353 -	chr3R_7_27865001	chr3R_27865001	RAL-887
2146	chr3R	27875687	27875727	chr3R	27882754	27882802	297	13	7072	5.0	5.5	5.2	2.1	7115	chr3R	27875687	intron	CG34353 -	chr3R	27879244	intron	CG34353 -	chr3R	27882802	intron	CG34353 -	chr3R_13_27875001	chr3R_27875001	RAL-887
2150	chr3R	28068476	28068521	chr3R	28073937	28073967	I-element	13	5459	1.0	2.5	1.8	4.6	5491	chr3R	28068476	intron	CG34362 +	chr3R	28071222	intron	CG34362 +	chr3R	28073967	intron	CG34362 +	chr3R_13_28070001	chr3R_28070001	RAL-887
2154	chr3R	28173656	28173693	chr3R	28181106	28181143	mdg1	5	7449	5.5	3.5	4.5	0.9	7487	chr3R	28173656	intron	CG34354 +	chr3R	28177400	intron	CG34354 +	chr3R	28181143	intron	CG34354 +	chr3R_5_28175001	chr3R_28175001	RAL-887
2155	chr3R	28253330	28253372	chr3R	28255850	28255871	jockey	9	2522	2.5	2.5	2.5	2.6	2541	chr3R	28253330	intergenic	not near genes	chr3R	28254600	intergenic	not near genes	chr3R	28255871	intergenic	not near genes	chr3R_9_28250001	chr3R_28250001	RAL-887
2173	chr3R	28792884	28792902	chr3R	28797962	28798015	jockey	6	5098	1.0	4.0	2.5	1.7	5131	chr3R	28792884	intergenic	not near genes	chr3R	28795450	intergenic	not near genes	chr3R	28798015	intergenic	not near genes	chr3R_6_28795001	chr3R_28795001	RAL-887
2183	chr3R	29079383	29079409	chr3R	29080774	29080801	NOF	6	1391	0.0	6.0	3.0	1.5	1418	chr3R	29079383	intron	CG11873 +	chr3R	29080092	intron	CG11873 +	chr3R	29080801	intron	CG11873 +	chr3R_6_29080001	chr3R_29080001	RAL-887
2193	chr3R	29319811	29319851	chr3R	29320150	29320190	jockey	8	339	2.0	4.0	3.0	2.0	379	chr3R	29319811	intergenic	Cnx99A -	chr3R	29320000	intergenic	Cnx99A -	chr3R	29320190	intergenic	not near genes	chr3R_8_29320001	chr3R_29320001	RAL-887
2206	chr3R	29738275	29738301	chr3R	29739763	29739789	hobo	10	1487	3.0	10.5	6.8	1.3	1514	chr3R	29738275	5` UTR	CG1969 +	chr3R	29739032	intron	CG1969 +	chr3R	29739789	5` UTR	CG1969 +	chr3R_10_29735001	chr3R_29735001	RAL-887
2209	chr3R	29882004	29882047	chr3R	29891179	29891222	roo	15	9174	6.5	6.5	6.5	2.0	9218	chr3R	29882004	intron	CG31038 +	chr3R	29886613	intron	CG31038 +	chr3R	29891222	intron	CG31038 +	chr3R_15_29885001	chr3R_29885001	RAL-887
2214	chr3R	30084834	30084882	chr3R	30086321	30086360	hobo	13	1485	1.5	6.0	3.8	2.7	1526	chr3R	30084834	intron	sima +	chr3R	30085597	intron	sima +	chr3R	30086360	intron	sima +	chr3R_13_30085001	chr3R_30085001	RAL-887
2218	chr3R	30238741	30238784	chr3R	30239925	30239969	1360	6	1176	2.0	0.0	1.0	3.0	1228	chr3R	30238741	intergenic	not near genes	chr3R	30239355	intergenic	not near genes	chr3R	30239969	intergenic	not near genes	chr3R_6_30235001	chr3R_30235001	RAL-887
2222	chr3R	30317325	30317358	chr3R	30324915	30324969	roo	8	7602	0.0	3.5	1.8	2.9	7644	chr3R	30317325	intron	hdc +	chr3R	30321147	intron	hdc +	chr3R	30324969	intron	hdc +	chr3R_8_30320001	chr3R_30320001	RAL-887
2224	chr3R	30375523	30375569	chr3R	30383168	30383214	412	10	7645	3.0	5.5	4.2	1.9	7691	chr3R	30375523	intergenic	not near genes	chr3R	30379368	intergenic	not near genes	chr3R	30383214	intergenic	not near genes	chr3R_10_30375001	chr3R_30375001	RAL-887
2225	chr3R	30396201	30396242	chr3R	30404487	30404528	roo	11	8279	3.5	5.0	4.2	2.1	8327	chr3R	30396201	intergenic	not near genes	chr3R	30400364	intergenic	not near genes	chr3R	30404528	5` UTR	CR45570 +	chr3R_11_30400001	chr3R_30400001	RAL-887
2226	chr3R	30679502	30679549	chr3R	30686988	30687031	blood	13	7485	2.5	2.5	2.5	3.7	7529	chr3R	30679502	intergenic	not near genes	chr3R	30683266	intergenic	not near genes	chr3R	30687031	intergenic	not near genes	chr3R_13_30680001	chr3R_30680001	RAL-887
2229	chr3R	30818791	30818815	chr3R	30820376	30820383	1360	8	1582	5.0	3.5	4.2	1.5	1592	chr3R	30818791	intron	cindr +	chr3R	30819587	intron	cindr +	chr3R	30820383	intron	cindr +	chr3R_8_30815001	chr3R_30815001	RAL-887
2235	chr3R	31074223	31074254	chr3R	31081838	31081872	springer	7	7614	2.0	3.0	2.5	2.0	7649	chr3R	31074223	intron	Sox100B +	chr3R	31078048	intron	Sox100B +	chr3R	31081872	intron	Sox100B +	chr3R_7_31075001	chr3R_31075001	RAL-887
2240	chr3R	31279380	31279406	chr3R	31285565	31285590	diver	9	6200	7.5	4.5	6.0	1.3	6210	chr3R	31279380	intergenic	not near genes	chr3R	31282485	intergenic	not near genes	chr3R	31285590	intergenic	not near genes	chr3R_9_31280001	chr3R_31280001	RAL-887
2242	chr3R	31413085	31413099	chr3R	31418288	31418301	copia	5	5210	5.5	3.5	4.5	0.9	5216	chr3R	31413085	intron	Gprk2 +	chr3R	31415693	intron	Gprk2 +	chr3R	31418301	intron	Gprk2 +	chr3R_5_31415001	chr3R_31415001	RAL-887
2253	chr3R	31691515	31691563	chr3R	31696296	31696347	Doc	13	4774	3.5	4.0	3.8	2.7	4832	chr3R	31691515	intergenic	not near genes	chr3R	31693931	intergenic	not near genes	chr3R	31696347	intergenic	not near genes	chr3R_13_31690001	chr3R_31690001	RAL-887
2263	chr3R	31997972	31998019	chr3R	32005461	32005509	blood	16	7488	1.5	3.0	2.2	5.0	7537	chr3R	31997972	intron	heph -	chr3R	32001740	intron	heph -	chr3R	32005509	intron	heph -	chr3R_16_32000001	chr3R_32000001	RAL-887
2267	chr4	76488	76513	chr4	81950	81951	I-element	5	5454	6.0	2.0	4.0	1.0	5463	chr4	76488	intron	pan +	chr4	79220	intron	pan +	chr4	81951	intron	pan +	chr4_5_75001	chr4_75001	RAL-887
2273	chr4	671596	671606	chr4	680197	680209	Tirant	4	8602	9.5	5.5	7.5	0.5	8613	chr4	671596	intron	CG11360 +	chr4	675902	intron	CG11360 +	chr4	680209	intron	CG11360 +	chr4_4_675001	chr4_675001	RAL-887
2274	chr4	671610	671631	chr4	680196	680215	Tirant	9	8595	4.5	5.5	5.0	1.5	8605	chr4	671610	intron	CG11360 +	chr4	675912	intron	CG11360 +	chr4	680215	intron	CG11360 +	chr4_9_675001	chr4_675001	RAL-887
2279	chrX	295840	295874	chrX	303478	303510	412	7	7638	3.5	3.5	3.5	1.6	7670	chrX	295840	intron	CG3777 +	chrX	299675	intron	CG3777 +	chrX	303510	intron	CG3777 +	chrX_7_295001	chrX_295001	RAL-887
2280	chrX	428410	428447	chrX	434608	434633	3S18	8	6199	2.5	1.5	2.0	2.7	6223	chrX	428410	intron	CG32816 -	chrX	431522	intron	CG32816 -	chrX	434633	intron	CG32816 -	chrX_8_430001	chrX_430001	RAL-887
2289	chrX	827589	827624	chrX	835401	835427	roo	10	7811	6.5	4.5	5.5	1.5	7838	chrX	827589	intron	CG43867 -	chrX	831508	intron	CG43867 -	chrX	835427	intron	CG43867 -	chrX_10_830001	chrX_830001	RAL-887
2293	chrX	1518032	1518073	chrX	1523443	1523478	jockey	7	5417	2.5	2.0	2.2	2.2	5446	chrX	1518032	intergenic	inc +	chrX	1520755	intergenic	not near genes	chrX	1523478	intergenic	not near genes	chrX_7_1520001	chrX_1520001	RAL-887
2295	chrX	1930523	1930564	chrX	1938112	1938155	opus	4	7588	0.5	3.0	1.8	1.4	7632	chrX	1930523	intergenic	CG11596 +	chrX	1934339	intergenic	not near genes	chrX	1938155	3` UTR	CG3857 -	chrX_4_1930001	chrX_1930001	RAL-887
2296	chrX	1954883	1954918	chrX	1962825	1962841	Stalker2	5	7942	3.5	1.5	2.5	1.4	7958	chrX	1954883	intron	Hr4 +	chrX	1958862	intron	Hr4 +	chrX	1962841	intron	Hr4 +	chrX_5_1955001	chrX_1955001	RAL-887
2301	chrX	2610374	2610413	chrX	2617503	2617550	HMS-Beagle	4	7130	2.0	3.5	2.8	1.1	7176	chrX	2610374	intergenic	CG8636 -	chrX	2613962	intergenic	not near genes	chrX	2617550	intergenic	Tsp3A -	chrX_4_2610001	chrX_2610001	RAL-887
2302	chrX	2664374	2664395	chrX	2665540	2665561	1360	4	1166	3.0	6.5	4.8	0.7	1187	chrX	2664374	intron	sgg +	chrX	2664968	intron	sgg +	chrX	2665561	intron	sgg +	chrX_4_2660001	chrX_2660001	RAL-887
2305	chrX	2844882	2844928	chrX	2852312	2852358	mdg1	13	7430	2.5	2.0	2.2	4.1	7476	chrX	2844882	intron	kirre +	chrX	2848620	intron	kirre +	chrX	2852358	intron	kirre +	chrX_13_2845001	chrX_2845001	RAL-887
2310	chrX	3058005	3058047	chrX	3058266	3058307	pogo	6	260	4.0	1.5	2.8	1.6	302	chrX	3058005	intron	kirre +	chrX	3058156	intron	kirre +	chrX	3058307	intron	kirre +	chrX_6_3055001	chrX_3055001	RAL-887
2311	chrX	3075621	3075667	chrX	3080946	3080946	Transpac	9	5321	3.5	6.0	4.8	1.6	5325	chrX	3075621	intron	kirre +	chrX	3078284	intron	kirre +	chrX	3080946	intron	kirre +	chrX_9_3075001	chrX_3075001	RAL-887
2315	chrX	3493073	3493114	chrX	3502249	3502293	roo	8	9178	3.0	3.5	3.2	1.9	9220	chrX	3493073	intron,intron	CR44999 +,Gas8 -	chrX	3497683	intron,intron	CR44999 +,Gas8 -	chrX	3502293	intron,intron	CR44999 +,Gas8 -	chrX_8_3495001	chrX_3495001	RAL-887
2316	chrX	3597531	3597575	chrX	3619719	3619734	roo	12	22182	3.5	2.5	3.0	3.0	22203	chrX	3597531	intron	AstA-R1 +	chrX	3608632	intron	AstA-R1 +	chrX	3619734	intron	AstA-R1 +	chrX_12_3605001	chrX_3605001	RAL-887
2318	chrX	3726766	3726780	chrX	3730174	3730197	NOF	4	3414	3.0	0.5	1.8	1.4	3431	chrX	3726766	intron	tlk +	chrX	3728482	intron	tlk +	chrX	3730197	intron	tlk +	chrX_4_3725001	chrX_3725001	RAL-887
2320	chrX	3842306	3842352	chrX	3842566	3842599	pogo	7	258	2.5	2.5	2.5	2.0	293	chrX	3842306	intron	ec +	chrX	3842452	intron	ec +	chrX	3842599	intron	ec +	chrX_7_3840001	chrX_3840001	RAL-887
2323	chrX	3986843	3986892	chrX	3994496	3994520	412	11	7648	5.0	0.0	2.5	3.1	7677	chrX	3986843	intergenic	not near genes	chrX	3990682	intergenic	not near genes	chrX	3994520	intergenic	not near genes	chrX_11_3990001	chrX_3990001	RAL-887
2329	chrX	4157895	4157917	chrX	4164950	4164990	297	6	7070	3.5	2.5	3.0	1.5	7095	chrX	4157895	intron	Fas2 -	chrX	4161442	intron	Fas2 -	chrX	4164990	intron	Fas2 -	chrX_6_4160001	chrX_4160001	RAL-887
2334	chrX	4700387	4700411	chrX	4700746	4700774	jockey	7	361	2.5	5.5	4.0	1.4	387	chrX	4700387	3` UTR	ctp +	chrX	4700580	3` UTR	ctp +	chrX	4700774	3` UTR	ctp +	chrX_7_4700001	chrX_4700001	RAL-887
2335	chrX	4763234	4763276	chrX	4763742	4763784	Stalker4	9	505	6.5	2.5	4.5	1.6	550	chrX	4763234	intergenic	not near genes	chrX	4763509	intergenic	not near genes	chrX	4763784	intergenic	not near genes	chrX_9_4760001	chrX_4760001	RAL-887
2336	chrX	4792369	4792389	chrX	4792822	4792832	jockey	4	450	2.5	6.5	4.5	0.7	463	chrX	4792369	intergenic	not near genes	chrX	4792600	intergenic	not near genes	chrX	4792832	intergenic	not near genes	chrX_4_4790001	chrX_4790001	RAL-887
2337	chrX	4792391	4792402	chrX	4792812	4792855	jockey	5	445	2.0	6.0	4.0	1.0	464	chrX	4792391	intergenic	not near genes	chrX	4792623	intergenic	not near genes	chrX	4792855	intergenic	not near genes	chrX_5_4790001	chrX_4790001	RAL-887
2339	chrX	4827996	4827998	chrX	4835358	4835388	Stalker4	4	7373	3.0	7.0	5.0	0.7	7392	chrX	4827996	intergenic	not near genes	chrX	4831692	intergenic	not near genes	chrX	4835388	intergenic	not near genes	chrX_4_4830001	chrX_4830001	RAL-887
2341	chrX	4990024	4990066	chrX	4997258	4997300	roo	4	7234	3.0	2.0	2.5	1.1	7276	chrX	4990024	intron	CR44833 -	chrX	4993662	intron	CR44833 -	chrX	4997300	intron	CR44833 -	chrX_4_4990001	chrX_4990001	RAL-887
2343	chrX	5096267	5096304	chrX	5103846	5103874	springer	12	7580	2.0	3.5	2.8	3.2	7607	chrX	5096267	intron,intron	CG15465 +,rg +	chrX	5100070	intron,intron	CG15465 +,rg +	chrX	5103874	intron,intron	CG15465 +,rg +	chrX_12_5100001	chrX_5100001	RAL-887
2345	chrX	5338691	5338736	chrX	5339964	5339984	jockey	11	1263	2.5	2.5	2.5	3.1	1293	chrX	5338691	intergenic	not near genes	chrX	5339338	intergenic	not near genes	chrX	5339984	intergenic	SK +	chrX_11_5335001	chrX_5335001	RAL-887
2349	chrX	5524826	5524841	chrX	5528709	5528724	412	4	3883	4.0	0.0	2.0	1.3	3898	chrX	5524826	intergenic	snoRNA:Psi28S-3342 -	chrX	5526775	intergenic	not near genes	chrX	5528724	intergenic	Vsx2 -	chrX_4_5525001	chrX_5525001	RAL-887
2354	chrX	5883797	5883822	chrX	5884058	5884068	pogo	6	258	6.0	4.5	5.2	1.0	271	chrX	5883797	intron	CR45668 -	chrX	5883932	intron	CR45668 -	chrX	5884068	intron	CR45668 -	chrX_6_5880001	chrX_5880001	RAL-887
2355	chrX	5884154	5884191	chrX	5884411	5884452	pogo	10	260	5.5	3.0	4.2	1.9	298	chrX	5884154	intron	CR45668 -	chrX	5884303	intron	CR45668 -	chrX	5884452	intron	CR45668 -	chrX_10_5880001	chrX_5880001	RAL-887
2360	chrX	6171560	6171597	chrX	6179017	6179043	Quasimodo	8	7451	3.0	3.0	3.0	2.0	7483	chrX	6171560	intron	Ca-alpha1T -	chrX	6175302	intron	Ca-alpha1T -	chrX	6179043	intron	Ca-alpha1T -	chrX_8_6175001	chrX_6175001	RAL-887
2365	chrX	6335218	6335244	chrX	6337730	6337771	Tirant	4	2524	0.0	4.0	2.0	1.3	2553	chrX	6335218	intergenic	not near genes	chrX	6336494	intergenic	not near genes	chrX	6337771	5` UTR	CG3842 +	chrX_4_6335001	chrX_6335001	RAL-887
2366	chrX	6392853	6392862	chrX	6397638	6397645	Doc	4	4784	7.5	4.0	5.8	0.6	4792	chrX	6392853	intergenic	not near genes	chrX	6395249	intergenic	not near genes	chrX	6397645	intergenic	not near genes	chrX_4_6395001	chrX_6395001	RAL-887
2367	chrX	6392865	6392896	chrX	6397632	6397649	Doc	10	4775	4.5	3.5	4.0	2.0	4784	chrX	6392865	intergenic	not near genes	chrX	6395257	intergenic	not near genes	chrX	6397649	intergenic	not near genes	chrX_10_6395001	chrX_6395001	RAL-887
2368	chrX	6562815	6562845	chrX	6571302	6571320	Tirant	11	8493	4.0	4.0	4.0	2.2	8505	chrX	6562815	intron	CG34417 +	chrX	6567068	intron	CG34417 +	chrX	6571320	intron	CG34417 +	chrX_11_6565001	chrX_6565001	RAL-887
2375	chrX	7023582	7023621	chrX	7030991	7031006	Tabor	15	7405	6.5	4.0	5.2	2.4	7424	chrX	7023582	intron	CG12541 -	chrX	7027294	intron	CG12541 -	chrX	7031006	intron	CG12541 -	chrX_15_7025001	chrX_7025001	RAL-887
2378	chrX	7125225	7125269	chrX	7134404	7134448	roo	11	9177	2.0	4.0	3.0	2.8	9223	chrX	7125225	intergenic	not near genes	chrX	7129836	intergenic	not near genes	chrX	7134448	intergenic	not near genes	chrX_11_7125001	chrX_7125001	RAL-887
2381	chrX	7702892	7702908	chrX	7703347	7703367	jockey	5	457	8.5	3.5	6.0	0.7	475	chrX	7702892	intron	CHES-1-like -	chrX	7703130	intron	CHES-1-like -	chrX	7703367	intron	CHES-1-like -	chrX_5_7700001	chrX_7700001	RAL-887
2383	chrX	7845716	7845756	chrX	7847214	7847267	hopper2	4	1507	2.5	2.0	2.2	1.2	1551	chrX	7845716	intergenic	not near genes	chrX	7846492	intergenic	not near genes	chrX	7847267	intergenic	not near genes	chrX_4_7845001	chrX_7845001	RAL-887
2394	chrX	8922314	8922339	chrX	8922763	8922783	jockey	5	451	7.0	2.5	4.8	0.9	469	chrX	8922314	intron	rdgA +	chrX	8922548	intron	rdgA +	chrX	8922783	intron	rdgA +	chrX_5_8920001	chrX_8920001	RAL-887
2395	chrX	8922347	8922362	chrX	8922760	8922807	jockey	11	446	4.5	2.0	3.2	2.6	460	chrX	8922347	intron	rdgA +	chrX	8922577	intron	rdgA +	chrX	8922807	intron	rdgA +	chrX_11_8920001	chrX_8920001	RAL-887
2396	chrX	8948737	8948784	chrX	8956267	8956282	roo	8	7526	1.5	0.5	1.0	4.0	7545	chrX	8948737	intron	rdgA +	chrX	8952510	intron	rdgA +	chrX	8956282	intron	rdgA +	chrX_8_8950001	chrX_8950001	RAL-887
2402	chrX	9508120	9508148	chrX	9509658	9509659	jockey	6	1533	5.0	3.0	4.0	1.2	1539	chrX	9508120	intron	CG32700 -	chrX	9508890	intron	CG32700 -	chrX	9509659	intron	CG32700 -	chrX_6_9505001	chrX_9505001	RAL-887
2404	chrX	9575794	9575802	chrX	9576127	9576146	mdg3	6	339	7.5	5.5	6.5	0.8	352	chrX	9575794	intron,exon	CG32699 -,CG42395 -	chrX	9575970	intron,intron	CG32699 -,CG42395 -	chrX	9576146	intron,5` UTR	CG32699 -,CG42395 -	chrX_6_9575001	chrX_9575001	RAL-887
2409	chrX	10138203	10138246	chrX	10145726	10145769	412	11	7523	3.0	3.0	3.0	2.8	7566	chrX	10138203	intron,intron	RhoU +,CR44894 -	chrX	10141986	intron,intron	RhoU +,CR44894 -	chrX	10145769	intron,intron	RhoU +,CR44894 -	chrX_11_10140001	chrX_10140001	RAL-887
2416	chrX	10550839	10550881	chrX	10552326	10552348	hobo	8	1478	3.5	2.5	3.0	2.0	1509	chrX	10550839	intron	spri -	chrX	10551594	intron	spri -	chrX	10552348	intron	spri -	chrX_8_10550001	chrX_10550001	RAL-887
2417	chrX	10686045	10686080	chrX	10691202	10691237	roo	6	5155	2.5	5.5	4.0	1.2	5192	chrX	10686045	intron	X11Lbeta +	chrX	10688641	intron	X11Lbeta +	chrX	10691237	intron	X11Lbeta +	chrX_6_10685001	chrX_10685001	RAL-887
2419	chrX	10772670	10772698	chrX	10772765	10772792	Tirant	5	94	4.0	2.5	3.2	1.2	122	chrX	10772670	intron	CG15211 +	chrX	10772731	intron	CG15211 +	chrX	10772792	intron	CG15211 +	chrX_5_10770001	chrX_10770001	RAL-887
2423	chrX	11184234	11184256	chrX	11189329	11189355	flea	4	5097	5.0	0.0	2.5	1.1	5121	chrX	11184234	intergenic	not near genes	chrX	11186794	intergenic	not near genes	chrX	11189355	intergenic	not near genes	chrX_4_11185001	chrX_11185001	RAL-887
2424	chrX	11268549	11268596	chrX	11270058	11270075	hopper2	11	1502	0.5	2.0	1.2	5.0	1526	chrX	11268549	intron	CG44422 -	chrX	11269312	intron	CG44422 -	chrX	11270075	intron	CG44422 -	chrX_11_11265001	chrX_11265001	RAL-887
2425	chrX	11312079	11312095	chrX	11319410	11319438	Stalker2	7	7349	2.5	3.5	3.0	1.8	7359	chrX	11312079	intergenic	not near genes	chrX	11315758	intergenic	not near genes	chrX	11319438	intergenic	not near genes	chrX_7_11315001	chrX_11315001	RAL-887
2428	chrX	11535028	11535043	chrX	11541513	11541532	Burdock	6	6489	10.5	2.5	6.5	0.8	6504	chrX	11535028	intron	Drak +	chrX	11538280	intron	Drak +	chrX	11541532	intron	Drak +	chrX_6_11535001	chrX_11535001	RAL-887
2429	chrX	11633400	11633448	chrX	11640474	11640492	297	10	7070	4.0	2.5	3.2	2.4	7092	chrX	11633400	intron	Ptp10D +	chrX	11636946	intron	Ptp10D +	chrX	11640492	intron	Ptp10D +	chrX_10_11635001	chrX_11635001	RAL-887
2430	chrX	11645091	11645133	chrX	11648279	11648320	NOF	7	3187	4.0	1.0	2.5	2.0	3229	chrX	11645091	intron	Ptp10D +	chrX	11646706	intron	Ptp10D +	chrX	11648320	intron	Ptp10D +	chrX_7_11645001	chrX_11645001	RAL-887
2449	chrX	13401474	13401497	chrX	13401846	13401869	jockey	5	371	1.5	0.0	0.8	2.8	395	chrX	13401474	intergenic	CG1673 +,CG12725 -	chrX	13401672	intergenic	CG12725 -,CG1673 +	chrX	13401869	3` UTR	CG12725 -	chrX_5_13400001	chrX_13400001	RAL-887
2451	chrX	13429449	13429487	chrX	13430614	13430656	jockey	7	1166	3.0	5.5	4.2	1.3	1207	chrX	13429449	intergenic	not near genes	chrX	13430052	intergenic	not near genes	chrX	13430656	intergenic	not near genes	chrX_7_13430001	chrX_13430001	RAL-887
2457	chrX	14105041	14105053	chrX	14114188	14114202	roo	4	9153	3.5	3.0	3.2	1.0	9161	chrX	14105041	intergenic	not near genes	chrX	14109622	intergenic	not near genes	chrX	14114202	5` UTR	CR44657 +	chrX_4_14105001	chrX_14105001	RAL-887
2459	chrX	14157578	14157594	chrX	14163255	14163271	297	4	5677	3.5	2.5	3.0	1.0	5693	chrX	14157578	intergenic	not near genes	chrX	14160424	intergenic	not near genes	chrX	14163271	intergenic	not near genes	chrX_4_14160001	chrX_14160001	RAL-887
2469	chrX	14778024	14778052	chrX	14782831	14782853	Doc	6	4807	3.5	2.5	3.0	1.5	4829	chrX	14778024	intergenic	CG5347 +	chrX	14780438	intergenic	not near genes	chrX	14782853	intergenic	Ag5r2 -	chrX_6_14780001	chrX_14780001	RAL-887
2470	chrX	14818778	14818792	chrX	14823982	14823991	copia	4	5212	2.0	5.0	3.5	0.9	5213	chrX	14818778	intron	rut -	chrX	14821384	intron	rut -	chrX	14823991	intron	rut -	chrX_4_14820001	chrX_14820001	RAL-887
2471	chrX	14936844	14936888	chrX	14946120	14946165	roo	6	9276	2.0	3.0	2.5	1.7	9321	chrX	14936844	intron	pdgy -	chrX	14941504	intron	pdgy -	chrX	14946165	intron	pdgy -	chrX_6_14940001	chrX_14940001	RAL-887
2478	chrX	15273723	15273735	chrX	15274876	15274907	1360	4	1172	4.0	5.5	4.8	0.7	1184	chrX	15273723	intergenic	not near genes	chrX	15274315	intergenic	not near genes	chrX	15274907	intergenic	not near genes	chrX_4_15270001	chrX_15270001	RAL-887
2480	chrX	15413045	15413082	chrX	15417366	15417385	Juan	10	4313	7.0	4.5	5.8	1.5	4340	chrX	15413045	intron	Cngl -	chrX	15415215	intron	Cngl -	chrX	15417385	intron	Cngl -	chrX_10_15415001	chrX_15415001	RAL-887
2488	chrX	16492640	16492671	chrX	16498237	16498268	mdg3	6	5597	2.5	7.0	4.8	1.0	5628	chrX	16492640	intron	para -	chrX	16495454	intron	para -	chrX	16498268	intron	para -	chrX_6_16495001	chrX_16495001	RAL-887
2496	chrX	17057916	17057962	chrX	17058177	17058223	pogo	5	260	0.0	2.0	1.0	2.5	307	chrX	17057916	intron	CG45002 -	chrX	17058070	intron	CG45002 -	chrX	17058223	intron	CG45002 -	chrX_5_17055001	chrX_17055001	RAL-887
2500	chrX	17195210	17195237	chrX	17200302	17200316	flea	4	5095	3.5	3.5	3.5	0.9	5106	chrX	17195210	3` UTR	baz +	chrX	17197763	3` UTR	baz +	chrX	17200316	3` UTR	baz +	chrX_4_17195001	chrX_17195001	RAL-887
2503	chrX	17556932	17556971	chrX	17557443	17557457	mdg1	5	497	1.5	3.0	2.2	1.6	525	chrX	17556932	intron	CG43658 -	chrX	17557194	intron	CG43658 -	chrX	17557457	intron	CG43658 -	chrX_5_17555001	chrX_17555001	RAL-887
2509	chrX	18194053	18194101	chrX	18194608	18194656	BS	8	553	2.0	4.0	3.0	2.0	603	chrX	18194053	intron	Frq2 +	chrX	18194354	intron	Frq2 +	chrX	18194656	intron	Frq2 +	chrX_8_18190001	chrX_18190001	RAL-887
2511	chrX	18429483	18429519	chrX	18434814	18434849	Transpac	5	5324	1.0	3.5	2.2	1.6	5366	chrX	18429483	intergenic	not near genes	chrX	18432166	intergenic	not near genes	chrX	18434849	intergenic	not near genes	chrX_5_18430001	chrX_18430001	RAL-887
2513	chrX	18555395	18555404	chrX	18556919	18556944	transib2	5	1537	2.5	2.5	2.5	1.4	1549	chrX	18555395	intron	Bx +	chrX	18556170	intron	Bx +	chrX	18556944	intron	Bx +	chrX_5_18555001	chrX_18555001	RAL-887
2523	chrX	19060396	19060435	chrX	19065195	19065239	Doc	6	4803	5.0	4.5	4.8	1.0	4843	chrX	19060396	intron	CG14190 +	chrX	19062818	intron	CG14190 +	chrX	19065239	intron	CG14190 +	chrX_6_19060001	chrX_19060001	RAL-887
2526	chrX	19136554	19136584	chrX	19143473	19143523	412	12	6936	1.5	2.5	2.0	4.0	6969	chrX	19136554	intergenic	not near genes	chrX	19140038	intergenic	not near genes	chrX	19143523	3` UTR	RhoGAP18B -	chrX_12_19140001	chrX_19140001	RAL-887
2532	chrX	19380148	19380180	chrX	19380406	19380441	pogo	7	260	4.5	0.5	2.5	2.0	293	chrX	19380148	intron	kek5 +	chrX	19380294	intron	kek5 +	chrX	19380441	intron	kek5 +	chrX_7_19380001	chrX_19380001	RAL-887
2533	chrX	19472115	19472154	chrX	19472702	19472716	jockey	7	578	2.5	3.0	2.8	1.8	601	chrX	19472115	intergenic	kek5 +	chrX	19472416	intergenic	not near genes	chrX	19472716	intergenic	not near genes	chrX_7_19470001	chrX_19470001	RAL-887
2540	chrX	19710051	19710072	chrX	19711857	19711860	S-element	5	1801	8.0	1.5	4.8	0.9	1809	chrX	19710051	intron	meso18E -	chrX	19710956	intron	meso18E -	chrX	19711860	intron	meso18E -	chrX_5_19710001	chrX_19710001	RAL-887
2541	chrX	19710096	19710104	chrX	19711865	19711910	S-element	5	1790	4.5	2.0	3.2	1.2	1814	chrX	19710096	intron	meso18E -	chrX	19711003	intron	meso18E -	chrX	19711910	intron	meso18E -	chrX_5_19710001	chrX_19710001	RAL-887
2552	chrX	20377327	20377341	chrX	20378807	20378820	hobo	6	1484	4.0	6.0	5.0	1.0	1493	chrX	20377327	intergenic	not near genes	chrX	20378074	intergenic	not near genes	chrX	20378820	intergenic	not near genes	chrX_6_20375001	chrX_20375001	RAL-887
2562	chrX	20940719	20940754	chrX	20942201	20942202	hobo	6	1479	7.5	3.0	5.2	1.0	1483	chrX	20940719	intergenic	not near genes	chrX	20941460	intergenic	not near genes	chrX	20942202	intergenic	not near genes	chrX_6_20940001	chrX_20940001	RAL-887
2565	chrX	21061856	21061897	chrX	21062361	21062402	roo	6	504	0.5	3.0	1.8	2.1	546	chrX	21061856	intron	bves +	chrX	21062129	intron	bves +	chrX	21062402	intron,3` UTR	bves +,CG32512 -	chrX_6_21060001	chrX_21060001	RAL-887
2569	chrX	21086115	21086158	chrX	21087164	21087207	jockey	9	1044	1.5	3.0	2.2	2.8	1092	chrX	21086115	intergenic	not near genes	chrX	21086661	intergenic	not near genes	chrX	21087207	intergenic	not near genes	chrX_9_21085001	chrX_21085001	RAL-887
2574	chrX	21458680	21458726	chrX	21464136	21464145	Ivk	17	5451	5.0	3.0	4.0	3.4	5465	chrX	21458680	intergenic	not near genes	chrX	21461412	intergenic	not near genes	chrX	21464145	intergenic	not near genes	chrX_17_21460001	chrX_21460001	RAL-887
2581	chrX	22522616	22522652	chrX	22525456	22525491	NOF	6	2838	2.5	3.0	2.8	1.6	2875	chrX	22522616	intron	CG17600 +	chrX	22524054	intron	CG17600 +	chrX	22525491	intron	CG17600 +	chrX_6_22520001	chrX_22520001	RAL-887
2584	chrX	22697496	22697511	chrX	22701796	22701828	Juan	6	4314	6.5	5.5	6.0	0.9	4332	chrX	22697496	intron	CR44997 +	chrX	22699662	intron	CR44997 +	chrX	22701828	intron	CR44997 +	chrX_6_22695001	chrX_22695001	RAL-887
2586	chrX	22811979	22811998	chrX	22816769	22816790	F-element	4	4791	8.5	3.5	6.0	0.6	4811	chrX	22811979	intergenic	CG12446 -	chrX	22814384	intergenic	not near genes	chrX	22816790	intergenic	not near genes	chrX_4_22810001	chrX_22810001	RAL-887
2590	chrX	22987092	22987123	chrX	22989769	22989796	Burdock	7	2676	1.0	0.0	0.5	4.7	2704	chrX	22987092	intron,intron	stnA -,stnB -	chrX	22988444	intron,intron	stnA -,stnB -	chrX	22989796	intron,intron	stnA -,stnB -	chrX_7_22985001	chrX_22985001	RAL-887
2593	chrX	22996294	22996336	chrX	23003546	23003587	roo	8	7249	4.0	3.5	3.8	1.7	7293	chrX	22996294	intron,intron	stnA -,stnB -	chrX	22999940	intron,intron	stnA -,stnB -	chrX	23003587	intron,intron	stnA -,stnB -	chrX_8_22995001	chrX_22995001	RAL-887
2594	chrX	23036362	23036412	chrX	23037783	23037829	pogo	5	1420	3.0	0.0	1.5	2.0	1467	chrX	23036362	intron	CG12061 +	chrX	23037096	intron	CG12061 +	chrX	23037829	intron	CG12061 +	chrX_5_23035001	chrX_23035001	RAL-887