SV#	Chr_5p	Chr_coord_5p_start	Chr_coord_5p_end	Chr_3p	Chr_coord_3p_start	Chr_coord_3p_end	repName	Reads_collapsed	avg_del_len	RefGen_3prime	Refgen_5prime	RefGen_Avg	Coverage_Ratio	size	Chr_5p	Chr_coord_5p	classification_5p	comment_5p	Chr_mid	Chr_coord_mid	classification_mid	comment_mid	Chr_3p	Chr_coord_3p	classification_3p	comment_3p	depletion_code	loci_code	libname
1	chr2L	47459	47487	chr2L	52564	52592	jockey	8	5104	6.5	4.0	5.2	1.3	5133	chr2L	47459	intron	Cda5 -	chr2L	50026	intron	Cda5 -	chr2L	52592	intron	Cda5 -	chr2L_8_50001	chr2L_50001	RAL-884
7	chr2L	976893	976912	chr2L	984528	984548	roo	9	7636	4.0	4.0	4.0	1.8	7655	chr2L	976893	intergenic	not near genes	chr2L	980720	intergenic	not near genes	chr2L	984548	intergenic	not near genes	chr2L_9_980001	chr2L_980001	RAL-884
12	chr2L	1220128	1220162	chr2L	1227594	1227627	blood	11	7465	5.0	1.0	3.0	2.8	7499	chr2L	1220128	intron	CG42329 +	chr2L	1223878	intron	CG42329 +	chr2L	1227627	intron	CG42329 +	chr2L_11_1220001	chr2L_1220001	RAL-884
17	chr2L	1711362	1711384	chr2L	1711683	1711696	mdg3	11	315	3.5	4.5	4.0	2.2	334	chr2L	1711362	3` UTR,3` UTR	mRpL48 +,frtz -	chr2L	1711529	3` UTR	frtz -	chr2L	1711696	3` UTR	frtz -	chr2L_11_1710001	chr2L_1710001	RAL-884
21	chr2L	2100377	2100402	chr2L	2109526	2109543	roo	4	9148	3.0	2.5	2.8	1.1	9166	chr2L	2100377	intron	dpr3 -	chr2L	2104960	intron	dpr3 -	chr2L	2109543	intron	dpr3 -	chr2L_4_2100001	chr2L_2100001	RAL-884
22	chr2L	2112130	2112140	chr2L	2119773	2119775	opus	5	7640	3.0	2.5	2.8	1.3	7645	chr2L	2112130	intergenic	not near genes	chr2L	2115952	intergenic	not near genes	chr2L	2119775	intergenic	not near genes	chr2L_5_2115001	chr2L_2115001	RAL-884
30	chr2L	3073029	3073058	chr2L	3078232	3078261	copia	10	5200	2.5	4.0	3.2	2.4	5232	chr2L	3073029	intron	toc -	chr2L	3075645	intron	toc -	chr2L	3078261	intron	toc -	chr2L_10_3075001	chr2L_3075001	RAL-884
35	chr2L	3251496	3251524	chr2L	3259061	3259088	springer	10	7562	5.5	3.0	4.2	1.9	7592	chr2L	3251496	intergenic	not near genes	chr2L	3255292	intergenic	not near genes	chr2L	3259088	intergenic	not near genes	chr2L_10_3255001	chr2L_3255001	RAL-884
44	chr2L	3649796	3649821	chr2L	3654993	3655023	copia	4	5201	1.0	3.5	2.2	1.2	5227	chr2L	3649796	intron	for -	chr2L	3652410	intron	for -	chr2L	3655023	intron	for -	chr2L_4_3650001	chr2L_3650001	RAL-884
49	chr2L	4066048	4066060	chr2L	4068870	4068879	Juan	4	2823	2.0	3.5	2.8	1.1	2831	chr2L	4066048	intron	ed +	chr2L	4067464	intron	ed +	chr2L	4068879	intron	ed +	chr2L_4_4065001	chr2L_4065001	RAL-884
55	chr2L	4601720	4601731	chr2L	4609150	4609172	mdg1	4	7435	2.5	3.5	3.0	1.0	7452	chr2L	4601720	intron	dp -	chr2L	4605446	intron	dp -	chr2L	4609172	intron	dp -	chr2L_4_4605001	chr2L_4605001	RAL-884
57	chr2L	4918167	4918196	chr2L	4923239	4923269	jockey	4	5073	0.5	2.0	1.2	1.8	5102	chr2L	4918167	intron	hoe1 -	chr2L	4920718	intron	hoe1 -	chr2L	4923269	intron	hoe1 -	chr2L_4_4920001	chr2L_4920001	RAL-884
65	chr2L	5827717	5827740	chr2L	5836725	5836747	roo	8	9007	3.0	3.5	3.2	1.9	9030	chr2L	5827717	intron	TrissinR +	chr2L	5832232	intron	TrissinR +	chr2L	5836747	intron	TrissinR +	chr2L_8_5830001	chr2L_5830001	RAL-884
74	chr2L	6426854	6426888	chr2L	6445114	6445130	roo	14	18257	3.5	3.5	3.5	3.1	18276	chr2L	6426854	3` UTR	CG9527 -	chr2L	6435992	intron	CG9527 -	chr2L	6445130	exon	CG9527 -	chr2L_14_6435001	chr2L_6435001	RAL-884
78	chr2L	7343325	7343340	chr2L	7350440	7350443	roo	4	7110	5.5	1.0	3.2	1.0	7118	chr2L	7343325	intron	Wnt6 +	chr2L	7346884	intron	Wnt6 +	chr2L	7350443	intron	Wnt6 +	chr2L_4_7345001	chr2L_7345001	RAL-884
88	chr2L	7977090	7977111	chr2L	7984066	7984078	297	7	6973	2.5	3.5	3.0	1.8	6988	chr2L	7977090	intron	Snoo -	chr2L	7980584	intron	Snoo -	chr2L	7984078	intron,5` UTR	Snoo -,CG7231 +	chr2L_7_7980001	chr2L_7980001	RAL-884
89	chr2L	8018820	8018832	chr2L	8023581	8023616	Doc	5	4778	0.0	1.0	0.5	3.3	4796	chr2L	8018820	intron	Tg +	chr2L	8021218	intron	Tg +	chr2L	8023616	intron	Tg +	chr2L_5_8020001	chr2L_8020001	RAL-884
100	chr2L	8723113	8723147	chr2L	8731490	8731503	Tirant	14	8372	1.5	3.0	2.2	4.4	8390	chr2L	8723113	intron	raw -	chr2L	8727308	intron	raw -	chr2L	8731503	intron	raw -	chr2L_14_8725001	chr2L_8725001	RAL-884
101	chr2L	9000279	9000309	chr2L	9007789	9007789	roo	8	7506	3.5	1.0	2.2	2.5	7510	chr2L	9000279	intergenic	Try29F +	chr2L	9004034	intergenic	not near genes	chr2L	9007789	intergenic	not near genes	chr2L_8_9000001	chr2L_9000001	RAL-884
113	chr2L	9393504	9393526	chr2L	9396467	9396493	jockey	7	2966	4.5	4.0	4.2	1.3	2989	chr2L	9393504	intron	Shawl -	chr2L	9394998	intron	Shawl -	chr2L	9396493	intron	Shawl -	chr2L_7_9390001	chr2L_9390001	RAL-884
118	chr2L	10156329	10156351	chr2L	10163796	10163818	blood	11	7468	3.0	2.0	2.5	3.1	7489	chr2L	10156329	intron,3` UTR	CG44153 -,CG4839 +	chr2L	10160074	intron	CG44153 -	chr2L	10163818	intron	CG44153 -	chr2L_11_10160001	chr2L_10160001	RAL-884
126	chr2L	10862864	10862875	chr2L	10864453	10864472	Rt1c	7	1606	3.5	3.5	3.5	1.6	1608	chr2L	10862864	3` UTR	CR43807 -	chr2L	10863668	intron	CR43807 -	chr2L	10864472	3` UTR	CR43807 -	chr2L_7_10860001	chr2L_10860001	RAL-884
128	chr2L	10946950	10946973	chr2L	10956162	10956188	roo	6	9214	1.5	2.5	2.0	2.0	9238	chr2L	10946950	intron	dpr2 -	chr2L	10951569	intron	dpr2 -	chr2L	10956188	intron	dpr2 -	chr2L_6_10950001	chr2L_10950001	RAL-884
134	chr2L	11540610	11540615	chr2L	11548012	11548015	Tabor	5	7402	4.0	1.5	2.8	1.3	7405	chr2L	11540610	intergenic	not near genes	chr2L	11544312	intergenic	not near genes	chr2L	11548015	intergenic	not near genes	chr2L_5_11540001	chr2L_11540001	RAL-884
135	chr2L	11563646	11563665	chr2L	11568841	11568869	copia	5	5201	6.0	4.0	5.0	0.8	5223	chr2L	11563646	intergenic	not near genes	chr2L	11566258	intergenic	not near genes	chr2L	11568869	intergenic	not near genes	chr2L_5_11565001	chr2L_11565001	RAL-884
137	chr2L	11713515	11713521	chr2L	11720983	11720988	blood	5	7467	5.5	4.5	5.0	0.8	7473	chr2L	11713515	intergenic	not near genes	chr2L	11717252	intergenic	not near genes	chr2L	11720988	intergenic	CR44143 +	chr2L_5_11715001	chr2L_11715001	RAL-884
145	chr2L	12728934	12728942	chr2L	12729171	12729181	pogo	4	238	2.5	4.0	3.2	1.0	247	chr2L	12728934	intron	MRP +	chr2L	12729058	intron	MRP +	chr2L	12729181	intron	MRP +	chr2L_4_12725001	chr2L_12725001	RAL-884
146	chr2L	12731056	12731089	chr2L	12735823	12735856	F-element	5	4767	4.5	3.0	3.8	1.0	4800	chr2L	12731056	intron	MRP +	chr2L	12733456	intron	MRP +	chr2L	12735856	intron	MRP +	chr2L_5_12730001	chr2L_12730001	RAL-884
147	chr2L	12739177	12739198	chr2L	12743954	12743979	Doc	7	4777	1.5	4.5	3.0	1.8	4802	chr2L	12739177	exon	MRP +	chr2L	12741578	intron	MRP +	chr2L	12743979	exon	MRP +	chr2L_7_12740001	chr2L_12740001	RAL-884
151	chr2L	12861694	12861725	chr2L	12863160	12863183	hobo	18	1465	1.0	2.0	1.5	7.2	1489	chr2L	12861694	intergenic	not near genes	chr2L	12862438	intergenic	not near genes	chr2L	12863183	intergenic	not near genes	chr2L_18_12860001	chr2L_12860001	RAL-884
152	chr2L	12933852	12933864	chr2L	12941318	12941329	blood	8	7466	7.5	1.5	4.5	1.5	7477	chr2L	12933852	intergenic	not near genes	chr2L	12937590	intergenic	not near genes	chr2L	12941329	intergenic	not near genes	chr2L_8_12935001	chr2L_12935001	RAL-884
153	chr2L	12933867	12933880	chr2L	12941317	12941346	blood	7	7458	5.5	1.5	3.5	1.6	7479	chr2L	12933867	intergenic	not near genes	chr2L	12937606	intergenic	not near genes	chr2L	12941346	intergenic	not near genes	chr2L_7_12935001	chr2L_12935001	RAL-884
154	chr2L	13036251	13036257	chr2L	13036492	13036499	X-element	4	241	2.0	1.5	1.8	1.4	248	chr2L	13036251	intron	CG9932 -	chr2L	13036375	intron	CG9932 -	chr2L	13036499	intron	CG9932 -	chr2L_4_13035001	chr2L_13035001	RAL-884
160	chr2L	13405650	13405679	chr2L	13410443	13410476	Doc	11	4794	2.0	3.0	2.5	3.1	4826	chr2L	13405650	exon	CG7110 +	chr2L	13408063	intron	CG7110 +	chr2L	13410476	intron	CG7110 +	chr2L_11_13405001	chr2L_13405001	RAL-884
161	chr2L	13449465	13449489	chr2L	13456901	13456925	Quasimodo	5	7436	2.5	3.0	2.8	1.3	7460	chr2L	13449465	intron,5` UTR	CG42784 +,Hsp60D -	chr2L	13453195	intron	CG42784 +	chr2L	13456925	intron	CG42784 +	chr2L_5_13450001	chr2L_13450001	RAL-884
162	chr2L	13481450	13481470	chr2L	13482057	13482077	jockey	6	607	3.5	6.5	5.0	1.0	627	chr2L	13481450	intron	CG42784 +	chr2L	13481764	intron	CG42784 +	chr2L	13482077	intron	CG42784 +	chr2L_6_13480001	chr2L_13480001	RAL-884
164	chr2L	13761808	13761835	chr2L	13762919	13762945	Doc	9	1107	5.0	3.5	4.2	1.7	1137	chr2L	13761808	intron	TM9SF4 +	chr2L	13762376	intron	TM9SF4 +	chr2L	13762945	intron	TM9SF4 +	chr2L_9_13760001	chr2L_13760001	RAL-884
166	chr2L	13853086	13853114	chr2L	13862236	13862263	roo	4	9150	2.0	4.5	3.2	1.0	9177	chr2L	13853086	intron	CenG1A +	chr2L	13857674	intron	CenG1A +	chr2L	13862263	intron	CenG1A +	chr2L_4_13855001	chr2L_13855001	RAL-884
176	chr2L	14889954	14889988	chr2L	14890378	14890407	jockey	8	421	1.5	4.5	3.0	2.0	453	chr2L	14889954	intergenic	not near genes	chr2L	14890180	intergenic	not near genes	chr2L	14890407	intergenic	not near genes	chr2L_8_14890001	chr2L_14890001	RAL-884
182	chr2L	15586414	15586436	chr2L	15593466	15593486	297	7	7051	0.5	2.0	1.2	3.2	7072	chr2L	15586414	intergenic	not near genes	chr2L	15589950	intergenic	not near genes	chr2L	15593486	intergenic	not near genes	chr2L_7_15585001	chr2L_15585001	RAL-884
186	chr2L	16071771	16071771	chr2L	16217660	16217660	copia	7	145889	17.5	27.0	22.2	0.3	145889	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217660	intergenic	not near genes	chr2L_7_16140001	chr2L_16140001	RAL-884
188	chr2L	16141164	16141194	chr2L	16146371	16146378	copia	5	5201	1.5	1.0	1.2	2.3	5214	chr2L	16141164	intergenic	not near genes	chr2L	16143771	intergenic	not near genes	chr2L	16146378	intergenic	not near genes	chr2L_5_16140001	chr2L_16140001	RAL-884
189	chr2L	16153744	16153751	chr2L	16160812	16160818	297	5	7067	4.5	2.0	3.2	1.2	7074	chr2L	16153744	intergenic	not near genes	chr2L	16157281	intergenic	not near genes	chr2L	16160818	intergenic	not near genes	chr2L_5_16155001	chr2L_16155001	RAL-884
192	chr2L	16071771	16071771	chr2L	16217660	16217660	copia	9	145889	17.5	27.0	22.2	0.4	145889	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217660	intergenic	not near genes	chr2L_9_16140001	chr2L_16140001	RAL-884
193	chr2L	16280252	16280283	chr2L	16281420	16281435	1360	7	1165	4.0	5.5	4.8	1.2	1183	chr2L	16280252	intron	crp -	chr2L	16280844	intron	crp -	chr2L	16281435	intron	crp -	chr2L_7_16280001	chr2L_16280001	RAL-884
202	chr2L	17273195	17273214	chr2L	17277978	17277997	F-element	4	4783	8.5	4.5	6.5	0.5	4802	chr2L	17273195	intergenic	not near genes	chr2L	17275596	intergenic	not near genes	chr2L	17277997	intergenic	not near genes	chr2L_4_17275001	chr2L_17275001	RAL-884
210	chr2L	17819929	17819943	chr2L	17825132	17825146	copia	4	5202	2.0	6.5	4.2	0.8	5217	chr2L	17819929	intron	CadN2 -	chr2L	17822538	intron	CadN2 -	chr2L	17825146	intron	CadN2 -	chr2L_4_17820001	chr2L_17820001	RAL-884
212	chr2L	17911963	17911980	chr2L	17914141	17914152	pogo	4	2176	4.5	2.5	3.5	0.9	2189	chr2L	17911963	intergenic	not near genes	chr2L	17913058	intergenic	not near genes	chr2L	17914152	intergenic	CG43271 -	chr2L_4_17910001	chr2L_17910001	RAL-884
213	chr2L	17951953	17951972	chr2L	17953419	17953422	hobo	4	1462	0.5	1.0	0.8	2.2	1469	chr2L	17951953	intergenic	CR44398 -,CR44397 -	chr2L	17952688	intergenic	not near genes	chr2L	17953422	intergenic	not near genes	chr2L_4_17950001	chr2L_17950001	RAL-884
214	chr2L	18051877	18051899	chr2L	18061023	18061046	roo	6	9146	4.0	1.0	2.5	1.7	9169	chr2L	18051877	intron	rdo +	chr2L	18056462	intron	rdo +	chr2L	18061046	intron	rdo +	chr2L_6_18055001	chr2L_18055001	RAL-884
221	chr2L	18408022	18408052	chr2L	18412806	18412836	Doc	6	4783	4.5	0.5	2.5	1.7	4814	chr2L	18408022	intergenic	not near genes	chr2L	18410429	intergenic	not near genes	chr2L	18412836	intergenic	not near genes	chr2L_6_18410001	chr2L_18410001	RAL-884
237	chr2L	19620109	19620129	chr2L	19621078	19621116	jockey	4	978	2.5	3.0	2.8	1.1	1007	chr2L	19620109	intron	Lar +	chr2L	19620612	intron	Lar +	chr2L	19621116	intron	Lar +	chr2L_4_19620001	chr2L_19620001	RAL-884
238	chr2L	19652574	19652589	chr2L	19674008	19674023	opus	5	21434	4.5	4.5	4.5	0.9	21449	chr2L	19652574	intron	Lar +	chr2L	19663298	intron	Lar +	chr2L	19674023	intron	Lar +	chr2L_5_19660001	chr2L_19660001	RAL-884
241	chr2L	19703539	19703565	chr2L	19712670	19712700	roo	10	9131	5.0	2.0	3.5	2.2	9161	chr2L	19703539	intron	Lar +	chr2L	19708120	intron	Lar +	chr2L	19712700	intron	Lar +	chr2L_10_19705001	chr2L_19705001	RAL-884
242	chr2L	19737362	19737371	chr2L	19740829	19740838	1360	4	3466	7.5	5.0	6.2	0.6	3476	chr2L	19737362	intergenic	Nf-YB +	chr2L	19739100	intergenic	not near genes	chr2L	19740838	intergenic	not near genes	chr2L_4_19735001	chr2L_19735001	RAL-884
243	chr2L	19737374	19737379	chr2L	19740828	19740848	1360	5	3462	6.5	5.0	5.8	0.7	3474	chr2L	19737374	intergenic	Nf-YB +	chr2L	19739111	intergenic	not near genes	chr2L	19740848	intergenic	not near genes	chr2L_5_19735001	chr2L_19735001	RAL-884
244	chr2L	19762812	19762837	chr2L	19763054	19763079	pogo	7	241	2.5	2.0	2.2	2.2	267	chr2L	19762812	5` UTR	fbp -	chr2L	19762946	intron	fbp -	chr2L	19763079	intron	fbp -	chr2L_7_19760001	chr2L_19760001	RAL-884
247	chr2L	20272123	20272129	chr2L	20282822	20282839	copia	4	10707	2.5	3.0	2.8	1.1	10716	chr2L	20272123	intergenic	not near genes	chr2L	20277481	intergenic	not near genes	chr2L	20282839	intergenic	not near genes	chr2L_4_20275001	chr2L_20275001	RAL-884
249	chr2L	20303167	20303187	chr2L	20310635	20310655	blood	5	7465	1.5	1.0	1.2	2.3	7488	chr2L	20303167	intergenic	not near genes	chr2L	20306911	intergenic	not near genes	chr2L	20310655	intergenic	not near genes	chr2L_5_20305001	chr2L_20305001	RAL-884
253	chr2L	20568667	20568687	chr2L	20569057	20569077	X-element	4	390	2.5	4.0	3.2	1.0	410	chr2L	20568667	intron	CR45347 +	chr2L	20568872	intron	CR45347 +	chr2L	20569077	intron	CR45347 +	chr2L_4_20565001	chr2L_20565001	RAL-884
257	chr2L	20901477	20901486	chr2L	20902622	20902649	1360	6	1157	1.0	4.5	2.8	1.6	1172	chr2L	20901477	intron,intron	CG43739 -,sky -	chr2L	20902063	intron,intron	CG43739 -,sky -	chr2L	20902649	intron,intron	CG43739 -,sky -	chr2L_6_20900001	chr2L_20900001	RAL-884
260	chr2L	20976656	20976678	chr2L	20981471	20981492	X-element	5	4815	1.5	4.5	3.0	1.2	4836	chr2L	20976656	intron	CG42238 -	chr2L	20979074	intron	CG42238 -	chr2L	20981492	intron	CG42238 -	chr2L_5_20975001	chr2L_20975001	RAL-884
265	chr2L	21041146	21041163	chr2L	21049401	21049424	Tirant	4	8259	2.0	1.5	1.8	1.4	8278	chr2L	21041146	intron	CG42238 -	chr2L	21045285	intron	CG42238 -	chr2L	21049424	intron	CG42238 -	chr2L_4_21045001	chr2L_21045001	RAL-884
272	chr2L	21981692	21981699	chr2L	21990855	21990856	roo	4	9162	4.0	6.5	5.2	0.6	9164	chr2L	21981692	exon	CG2528 -	chr2L	21986274	intron	CG2528 -	chr2L	21990856	exon	CG2528 -	chr2L_4_21985001	chr2L_21985001	RAL-884
274	chr2L	22548924	22548929	chr2L	22550148	22550154	1360	4	1225	0.5	4.0	2.2	1.2	1230	chr2L	22548924	intergenic	CG17490 +	chr2L	22549539	intergenic	not near genes	chr2L	22550154	intergenic	CG17493 +	chr2L_4_22545001	chr2L_22545001	RAL-884
275	chr2L	22581971	22581999	chr2L	22583760	22583788	S-element	5	1783	0.5	0.5	0.5	3.3	1817	chr2L	22581971	intron	CG17494 +	chr2L	22582880	intron	CG17494 +	chr2L	22583788	intron	CG17494 +	chr2L_5_22580001	chr2L_22580001	RAL-884
276	chr2L	22679801	22679814	chr2L	22684573	22684585	F-element	5	4771	3.0	4.5	3.8	1.0	4784	chr2L	22679801	intron	CG40006 -	chr2L	22682193	intron	CG40006 -	chr2L	22684585	intron	CG40006 -	chr2L_5_22680001	chr2L_22680001	RAL-884
277	chr2L	22679820	22679831	chr2L	22684566	22684595	F-element	4	4758	3.0	3.0	3.0	1.0	4775	chr2L	22679820	intron	CG40006 -	chr2L	22682208	intron	CG40006 -	chr2L	22684595	intron	CG40006 -	chr2L_4_22680001	chr2L_22680001	RAL-884
278	chr2R	529323	529355	chr2R	537948	537962	Max-element	5	8616	2.0	3.0	2.5	1.4	8639	chr2R	529323	intron	CG40378 +	chr2R	533642	intron	CG40378 +	chr2R	537962	intron	CG40378 +	chr2R_5_530001	chr2R_530001	RAL-884
279	chr2R	1082371	1082385	chr2R	1087126	1087152	Doc	6	4760	1.0	3.0	2.0	2.0	4781	chr2R	1082371	intron	rl +	chr2R	1084762	intron	rl +	chr2R	1087152	intron	rl +	chr2R_6_1080001	chr2R_1080001	RAL-884
280	chr2R	2498983	2499002	chr2R	2508130	2508149	roo	5	9145	4.0	1.5	2.8	1.3	9166	chr2R	2498983	intron	MFS17 -	chr2R	2503566	intron	MFS17 -	chr2R	2508149	intron	MFS17 -	chr2R_5_2500001	chr2R_2500001	RAL-884
281	chr2R	2591544	2591557	chr2R	2594218	2594233	roo	4	2674	16.0	12.0	14.0	0.3	2689	chr2R	2591544	intergenic	not near genes	chr2R	2592888	intergenic	not near genes	chr2R	2594233	intergenic	not near genes	chr2R_4_2590001	chr2R_2590001	RAL-884
282	chr2R	3144091	3144107	chr2R	3393369	3393385	Doc	5	249277	9.0	14.0	11.5	0.4	249294	chr2R	3144091	intron	CG42596 +	chr2R	3268738	intergenic	not near genes	chr2R	3393385	intergenic	not near genes	chr2R_5_3265001	chr2R_3265001	RAL-884
285	chr2R	4622960	4622988	chr2R	4624110	4624147	1360	9	1153	4.0	3.0	3.5	2.0	1187	chr2R	4622960	intergenic	CR44101 -	chr2R	4623554	intergenic	not near genes	chr2R	4624147	intergenic	not near genes	chr2R_9_4620001	chr2R_4620001	RAL-884
286	chr2R	4624644	4624674	chr2R	4626547	4626563	Bica	15	1902	1.0	1.0	1.0	7.5	1919	chr2R	4624644	intergenic	not near genes	chr2R	4625604	intergenic	not near genes	chr2R	4626563	intergenic	not near genes	chr2R_15_4625001	chr2R_4625001	RAL-884
287	chr2R	4750353	4750370	chr2R	4751498	4751527	1360	6	1151	0.0	2.5	1.2	2.7	1174	chr2R	4750353	intron	conu +	chr2R	4750940	intron	conu +	chr2R	4751527	intron	conu +	chr2R_6_4750001	chr2R_4750001	RAL-884
298	chr2R	5869276	5869309	chr2R	5874351	5874385	flea	8	5070	2.0	2.5	2.2	2.5	5109	chr2R	5869276	intergenic	not near genes	chr2R	5871830	intergenic	not near genes	chr2R	5874385	intergenic	not near genes	chr2R_8_5870001	chr2R_5870001	RAL-884
303	chr2R	6096726	6096749	chr2R	6101912	6101918	BS	7	5182	3.0	3.5	3.2	1.7	5192	chr2R	6096726	intron	EcR -	chr2R	6099322	intron	EcR -	chr2R	6101918	intron	EcR -	chr2R_7_6095001	chr2R_6095001	RAL-884
308	chr2R	6494531	6494553	chr2R	6499287	6499315	F-element	7	4755	2.0	2.0	2.0	2.3	4784	chr2R	6494531	intergenic	not near genes	chr2R	6496923	intergenic	not near genes	chr2R	6499315	intergenic	not near genes	chr2R_7_6495001	chr2R_6495001	RAL-884
318	chr2R	7139944	7139953	chr2R	7141424	7141445	hopper2	5	1486	2.5	8.5	5.5	0.8	1501	chr2R	7139944	intergenic	not near genes	chr2R	7140694	intergenic	not near genes	chr2R	7141445	intergenic	not near genes	chr2R_5_7140001	chr2R_7140001	RAL-884
319	chr2R	7196565	7196596	chr2R	7201340	7201371	F-element	6	4774	1.0	1.0	1.0	3.0	4806	chr2R	7196565	intron	pk +	chr2R	7198968	intron	pk +	chr2R	7201371	intron	pk +	chr2R_6_7195001	chr2R_7195001	RAL-884
324	chr2R	7608411	7608437	chr2R	7613608	7613616	I-element	4	5194	1.0	0.5	0.8	2.2	5205	chr2R	7608411	intron	CG1358 -	chr2R	7611014	intron	CG1358 -	chr2R	7613616	intron	CG1358 -	chr2R_4_7610001	chr2R_7610001	RAL-884
325	chr2R	7815672	7815696	chr2R	7822140	7822158	Burdock	4	6466	2.0	2.0	2.0	1.3	6486	chr2R	7815672	intergenic	CG1882 +	chr2R	7818915	intergenic	not near genes	chr2R	7822158	3` UTR	cathD -	chr2R_4_7815001	chr2R_7815001	RAL-884
336	chr2R	8330867	8330887	chr2R	8331353	8331373	roo	8	485	1.5	3.5	2.5	2.3	506	chr2R	8330867	intron	pdm3 +	chr2R	8331120	intron	pdm3 +	chr2R	8331373	intron	pdm3 +	chr2R_8_8330001	chr2R_8330001	RAL-884
338	chr2R	8398214	8398244	chr2R	8402991	8403016	Doc	7	4769	2.0	3.0	2.5	2.0	4802	chr2R	8398214	intron	CG2121 -	chr2R	8400615	intron	CG2121 -	chr2R	8403016	intron	CG2121 -	chr2R_7_8400001	chr2R_8400001	RAL-884
340	chr2R	8722763	8722776	chr2R	8723004	8723015	pogo	8	239	5.0	0.5	2.8	2.1	252	chr2R	8722763	intron	CG14767 -	chr2R	8722889	intron	CG14767 -	chr2R	8723015	intron	CG14767 -	chr2R_8_8720001	chr2R_8720001	RAL-884
341	chr2R	8722777	8722791	chr2R	8723003	8723022	pogo	7	232	4.0	0.5	2.2	2.2	245	chr2R	8722777	intron	CG14767 -	chr2R	8722900	intron	CG14767 -	chr2R	8723022	intron	CG14767 -	chr2R_7_8720001	chr2R_8720001	RAL-884
347	chr2R	9212691	9212726	chr2R	9213177	9213191	roo	5	474	2.0	3.5	2.8	1.3	500	chr2R	9212691	intergenic	CR45309 +	chr2R	9212941	intergenic	CR45309 +	chr2R	9213191	5` UTR	CR45309 +	chr2R_5_9210001	chr2R_9210001	RAL-884
352	chr2R	9871044	9871061	chr2R	9871530	9871547	roo	6	485	3.5	4.0	3.8	1.2	503	chr2R	9871044	intron	cbx -	chr2R	9871296	intron	cbx -	chr2R	9871547	intron,5` UTR	cbx -,CG18446 +	chr2R_6_9870001	chr2R_9870001	RAL-884
353	chr2R	9945452	9945473	chr2R	9945627	9945645	BS	5	178	3.0	1.5	2.2	1.6	193	chr2R	9945452	intron	Mef2 -	chr2R	9945548	intron	Mef2 -	chr2R	9945645	intron	Mef2 -	chr2R_5_9945001	chr2R_9945001	RAL-884
354	chr2R	10005848	10005872	chr2R	10007013	10007030	1360	5	1160	7.0	3.0	5.0	0.8	1182	chr2R	10005848	intron	Pka-R2 -	chr2R	10006439	intron	Pka-R2 -	chr2R	10007030	intron	Pka-R2 -	chr2R_5_10005001	chr2R_10005001	RAL-884
362	chr2R	10585573	10585591	chr2R	10594149	10594174	Tirant	8	8579	3.5	1.5	2.5	2.3	8601	chr2R	10585573	intron	psq +	chr2R	10589874	intron	psq +	chr2R	10594174	intron	psq +	chr2R_8_10585001	chr2R_10585001	RAL-884
366	chr2R	10948039	10948062	chr2R	10955581	10955598	17.6	7	7543	0.5	3.0	1.8	2.5	7559	chr2R	10948039	intergenic	not near genes	chr2R	10951818	intergenic	not near genes	chr2R	10955598	intergenic	not near genes	chr2R_7_10950001	chr2R_10950001	RAL-884
367	chr2R	10979668	10979678	chr2R	10980133	10980146	297	5	466	2.0	5.0	3.5	1.1	478	chr2R	10979668	intergenic	not near genes	chr2R	10979907	intergenic	not near genes	chr2R	10980146	intergenic	not near genes	chr2R_5_10975001	chr2R_10975001	RAL-884
368	chr2R	11009817	11009846	chr2R	11018988	11019017	roo	5	9170	2.0	4.0	3.0	1.2	9200	chr2R	11009817	intron	luna -	chr2R	11014417	intron	luna -	chr2R	11019017	intron	luna -	chr2R_5_11010001	chr2R_11010001	RAL-884
371	chr2R	11207815	11207853	chr2R	11208006	11208013	BS	12	183	2.0	3.5	2.8	3.2	198	chr2R	11207815	intron	shn +	chr2R	11207914	intron	shn +	chr2R	11208013	intron	shn +	chr2R_12_11205001	chr2R_11205001	RAL-884
373	chr2R	11472649	11472673	chr2R	11473846	11473870	pogo	7	1194	4.0	4.5	4.2	1.3	1221	chr2R	11472649	intergenic	not near genes	chr2R	11473260	intergenic	not near genes	chr2R	11473870	intergenic	not near genes	chr2R_7_11470001	chr2R_11470001	RAL-884
382	chr2R	12501707	12501719	chr2R	12503850	12503872	Rt1c	4	2147	2.5	4.5	3.5	0.9	2165	chr2R	12501707	intron	fdl -	chr2R	12502790	intron	fdl -	chr2R	12503872	intron	fdl -	chr2R_4_12500001	chr2R_12500001	RAL-884
389	chr2R	13136859	13136864	chr2R	13141634	13141662	Doc	4	4789	8.0	3.5	5.8	0.6	4803	chr2R	13136859	intron	Cap-G +	chr2R	13139260	intron	Cap-G +	chr2R	13141662	intron	Cap-G +	chr2R_4_13135001	chr2R_13135001	RAL-884
390	chr2R	13580512	13580532	chr2R	13580847	13580874	jockey	7	338	0.0	2.5	1.2	3.2	362	chr2R	13580512	3` UTR	CG6191 -	chr2R	13580693	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R	13580874	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R_7_13580001	chr2R_13580001	RAL-884
392	chr2R	13905601	13905635	chr2R	13907582	13907591	Rt1a	6	1977	2.0	3.0	2.5	1.7	1990	chr2R	13905601	intron	shot -	chr2R	13906596	intron	shot -	chr2R	13907591	intron	shot -	chr2R_6_13905001	chr2R_13905001	RAL-884
401	chr2R	15015466	15015475	chr2R	15022888	15022898	mdg1	4	7422	5.0	3.0	4.0	0.8	7432	chr2R	15015466	intron	hbs +	chr2R	15019182	intron	hbs +	chr2R	15022898	intron	hbs +	chr2R_4_15015001	chr2R_15015001	RAL-884
403	chr2R	15084979	15085008	chr2R	15092028	15092056	297	8	7048	2.5	3.0	2.8	2.1	7077	chr2R	15084979	intergenic	not near genes	chr2R	15088518	intergenic	not near genes	chr2R	15092056	5` UTR	CR44457 +	chr2R_8_15085001	chr2R_15085001	RAL-884
421	chr2R	17236513	17236540	chr2R	17241717	17241743	copia	5	5202	1.0	5.5	3.2	1.2	5230	chr2R	17236513	intron	mbl +	chr2R	17239128	intron	mbl +	chr2R	17241743	intron	mbl +	chr2R_5_17235001	chr2R_17235001	RAL-884
426	chr2R	17784024	17784056	chr2R	17784265	17784280	pogo	9	237	4.5	3.0	3.8	1.9	256	chr2R	17784024	intergenic	mir-31a -	chr2R	17784152	intergenic	mir-31a -	chr2R	17784280	intergenic	mir-31a -	chr2R_9_17780001	chr2R_17780001	RAL-884
433	chr2R	18358391	18358411	chr2R	18372603	18372623	roo	5	14212	2.0	0.5	1.2	2.3	14232	chr2R	18358391	intergenic	not near genes	chr2R	18365507	intergenic	not near genes	chr2R	18372623	intergenic	not near genes	chr2R_5_18365001	chr2R_18365001	RAL-884
438	chr2R	18575812	18575821	chr2R	18581984	18582009	3S18	4	6180	4.0	2.0	3.0	1.0	6197	chr2R	18575812	intron	GEFmeso -	chr2R	18578910	intron	GEFmeso -	chr2R	18582009	intron	GEFmeso -	chr2R_4_18575001	chr2R_18575001	RAL-884
439	chr2R	18590871	18590901	chr2R	18600023	18600053	roo	7	9149	0.0	3.5	1.8	2.5	9182	chr2R	18590871	intron	GEFmeso -	chr2R	18595462	intron	GEFmeso -	chr2R	18600053	intron	GEFmeso -	chr2R_7_18595001	chr2R_18595001	RAL-884
453	chr2R	19776615	19776627	chr2R	19779922	19779950	jockey	5	3315	5.5	4.5	5.0	0.8	3335	chr2R	19776615	intergenic	not near genes	chr2R	19778282	intergenic	not near genes	chr2R	19779950	intergenic	not near genes	chr2R_5_19775001	chr2R_19775001	RAL-884
459	chr2R	20739466	20739473	chr2R	20744221	20744236	F-element	4	4762	2.0	5.5	3.8	0.8	4770	chr2R	20739466	intron	dpr +	chr2R	20741851	intron	dpr +	chr2R	20744236	intron	dpr +	chr2R_4_20740001	chr2R_20740001	RAL-884
469	chr2R	21738284	21738306	chr2R	21747444	21747464	roo	5	9156	0.5	5.5	3.0	1.2	9180	chr2R	21738284	intergenic	not near genes	chr2R	21742874	intergenic	not near genes	chr2R	21747464	intergenic	not near genes	chr2R_5_21740001	chr2R_21740001	RAL-884
470	chr2R	21753086	21753117	chr2R	21753571	21753599	roo	7	484	3.5	2.5	3.0	1.8	513	chr2R	21753086	intergenic	not near genes	chr2R	21753342	intergenic	not near genes	chr2R	21753599	intergenic	not near genes	chr2R_7_21750001	chr2R_21750001	RAL-884
473	chr2R	21809525	21809558	chr2R	21817765	21817797	roo	5	8240	2.0	5.5	3.8	1.0	8272	chr2R	21809525	intergenic	not near genes	chr2R	21813661	intergenic	not near genes	chr2R	21817797	intergenic	not near genes	chr2R_5_21810001	chr2R_21810001	RAL-884
483	chr2R	22360387	22360399	chr2R	22360820	22360826	jockey	8	432	5.0	1.5	3.2	1.9	439	chr2R	22360387	intron	Liprin-gamma -	chr2R	22360606	intron	Liprin-gamma -	chr2R	22360826	intron	Liprin-gamma -	chr2R_8_22360001	chr2R_22360001	RAL-884
485	chr2R	22465330	22465348	chr2R	22465511	22465519	BS	4	186	2.5	1.0	1.8	1.4	189	chr2R	22465330	intron	CG10384 +	chr2R	22465424	intron	CG10384 +	chr2R	22465519	intron	CG10384 +	chr2R_4_22465001	chr2R_22465001	RAL-884
487	chr2R	22525753	22525786	chr2R	22529300	22529300	jockey	4	3542	0.5	2.0	1.2	1.8	3547	chr2R	22525753	intron	px -	chr2R	22527526	intron	px -	chr2R	22529300	intron	px -	chr2R_4_22525001	chr2R_22525001	RAL-884
490	chr2R	22774969	22775000	chr2R	22775388	22775399	jockey	10	416	3.0	4.0	3.5	2.2	430	chr2R	22774969	intron	CG42260 -	chr2R	22775184	intron	CG42260 -	chr2R	22775399	intron	CG42260 -	chr2R_10_22775001	chr2R_22775001	RAL-884
497	chr2R	23402611	23402640	chr2R	23407687	23407716	flea	4	5072	2.0	2.5	2.2	1.2	5105	chr2R	23402611	intergenic	CG3520 -	chr2R	23405164	intergenic	not near genes	chr2R	23407716	intergenic	not near genes	chr2R_4_23405001	chr2R_23405001	RAL-884
503	chr2R	24147072	24147094	chr2R	24154650	24154659	412	6	7573	5.5	6.0	5.8	0.9	7587	chr2R	24147072	intron	Dat +	chr2R	24150866	intron	Dat +	chr2R	24154659	intron	Dat +	chr2R_6_24150001	chr2R_24150001	RAL-884
506	chr2R	24353429	24353457	chr2R	24361788	24361800	roo	8	8359	3.0	4.0	3.5	1.8	8371	chr2R	24353429	intron,intron	bs +,CR44811 -	chr2R	24357614	intron,intron	bs +,CR44811 -	chr2R	24361800	intron,intron	bs +,CR44811 -	chr2R_8_24355001	chr2R_24355001	RAL-884
513	chr2R	24727882	24727916	chr2R	24735390	24735391	mdg1	11	7502	2.5	4.0	3.2	2.6	7509	chr2R	24727882	intron	Mid1 -	chr2R	24731636	intron	Mid1 -	chr2R	24735391	intron	Mid1 -	chr2R_11_24730001	chr2R_24730001	RAL-884
514	chr2R	24763611	24763641	chr2R	24765585	24765595	G2	7	1971	6.0	4.5	5.2	1.1	1984	chr2R	24763611	exon	CG3894 +	chr2R	24764603	intron	CG3894 +	chr2R	24765595	exon	CG3894 +	chr2R_7_24760001	chr2R_24760001	RAL-884
526	chr3L	110222	110244	chr3L	119389	119411	roo	4	9166	3.0	8.0	5.5	0.6	9189	chr3L	110222	intergenic	not near genes	chr3L	114816	intergenic	not near genes	chr3L	119411	intergenic	not near genes	chr3L_4_110001	chr3L_110001	RAL-884
527	chr3L	402696	402716	chr3L	409745	409769	297	10	7051	2.5	2.0	2.2	3.1	7073	chr3L	402696	intergenic	not near genes	chr3L	406232	intergenic	not near genes	chr3L	409769	intergenic	not near genes	chr3L_10_405001	chr3L_405001	RAL-884
532	chr3L	858013	858029	chr3L	866479	866508	Tirant	4	8470	2.0	3.5	2.8	1.1	8495	chr3L	858013	intergenic	not near genes	chr3L	862260	intergenic	not near genes	chr3L	866508	5` UTR	CG12502 +	chr3L_4_860001	chr3L_860001	RAL-884
534	chr3L	925178	925210	chr3L	932602	932635	mdg1	18	7423	7.0	6.0	6.5	2.4	7457	chr3L	925178	intron	Glut1 +	chr3L	928906	intron	Glut1 +	chr3L	932635	intron	Glut1 +	chr3L_18_925001	chr3L_925001	RAL-884
535	chr3L	925092	925104	chr3L	932894	932923	mdg1	9	7808	17.5	16.0	16.8	0.5	7831	chr3L	925092	intron	Glut1 +	chr3L	929008	intron	Glut1 +	chr3L	932923	intron	Glut1 +	chr3L_9_925001	chr3L_925001	RAL-884
541	chr3L	1154134	1154144	chr3L	1163279	1163293	roo	4	9148	2.5	1.0	1.8	1.4	9159	chr3L	1154134	intron	bab2 -	chr3L	1158714	intron	bab2 -	chr3L	1163293	intron	bab2 -	chr3L_4_1155001	chr3L_1155001	RAL-884
542	chr3L	1219597	1219625	chr3L	1227330	1227356	412	9	7731	4.5	5.0	4.8	1.6	7759	chr3L	1219597	intron	mwh +	chr3L	1223476	intron	mwh +	chr3L	1227356	intron	mwh +	chr3L_9_1220001	chr3L_1220001	RAL-884
547	chr3L	1506020	1506030	chr3L	1513606	1513627	17.6	4	7592	4.5	2.5	3.5	0.9	7607	chr3L	1506020	intron,intron	Psa +,cue -	chr3L	1509824	intron,intron	Psa +,cue -	chr3L	1513627	intron,intron	Psa +,cue -	chr3L_4_1505001	chr3L_1505001	RAL-884
556	chr3L	2447505	2447537	chr3L	2456660	2456680	roo	9	9142	3.5	5.0	4.2	1.7	9175	chr3L	2447505	intron	CG45186 +	chr3L	2452092	intron	CG45186 +	chr3L	2456680	intron	CG45186 +	chr3L_9_2450001	chr3L_2450001	RAL-884
561	chr3L	2927846	2927870	chr3L	2936121	2936147	Tirant	4	8276	2.5	0.0	1.2	1.8	8301	chr3L	2927846	intron	Shab +	chr3L	2931996	intron	Shab +	chr3L	2936147	intron	Shab +	chr3L_4_2930001	chr3L_2930001	RAL-884
563	chr3L	3281445	3281456	chr3L	3281941	3281946	Doc	4	494	5.5	4.5	5.0	0.7	501	chr3L	3281445	intron	CG12017 +	chr3L	3281696	intron	CG12017 +	chr3L	3281946	intron	CG12017 +	chr3L_4_3280001	chr3L_3280001	RAL-884
564	chr3L	3281458	3281472	chr3L	3281933	3281968	Doc	9	491	4.5	4.0	4.2	1.7	510	chr3L	3281458	intron	CG12017 +	chr3L	3281713	intron	CG12017 +	chr3L	3281968	intron	CG12017 +	chr3L_9_3280001	chr3L_3280001	RAL-884
566	chr3L	3475073	3475111	chr3L	3475517	3475545	jockey	11	438	0.0	6.5	3.2	2.6	472	chr3L	3475073	intron	CG42324 +	chr3L	3475309	intron	CG42324 +	chr3L	3475545	intron	CG42324 +	chr3L_11_3475001	chr3L_3475001	RAL-884
567	chr3L	3601308	3601332	chr3L	3606610	3606640	copia	9	5306	1.0	3.0	2.0	3.0	5332	chr3L	3601308	intron	Eip63E +	chr3L	3603974	intron	Eip63E +	chr3L	3606640	intron	Eip63E +	chr3L_9_3600001	chr3L_3600001	RAL-884
571	chr3L	3833739	3833762	chr3L	3833980	3834003	pogo	4	238	2.5	1.0	1.8	1.4	264	chr3L	3833739	intron	enc +	chr3L	3833871	intron	enc +	chr3L	3834003	intron	enc +	chr3L_4_3830001	chr3L_3830001	RAL-884
583	chr3L	4901136	4901160	chr3L	4907317	4907324	diver	5	6179	0.5	4.5	2.5	1.4	6188	chr3L	4901136	intergenic	CG13704 +	chr3L	4904230	intergenic	not near genes	chr3L	4907324	intergenic	not near genes	chr3L_5_4900001	chr3L_4900001	RAL-884
595	chr3L	5926321	5926334	chr3L	5926504	5926507	BS	4	179	4.5	4.5	4.5	0.7	186	chr3L	5926321	intron	Vap-33B +	chr3L	5926414	intron	Vap-33B +	chr3L	5926507	intron	Vap-33B +	chr3L_4_5925001	chr3L_5925001	RAL-884
596	chr3L	5926339	5926346	chr3L	5926503	5926526	BS	6	177	3.0	4.5	3.8	1.2	187	chr3L	5926339	intron	Vap-33B +	chr3L	5926432	intron	Vap-33B +	chr3L	5926526	intron	Vap-33B +	chr3L_6_5925001	chr3L_5925001	RAL-884
597	chr3L	5926349	5926351	chr3L	5926502	5926506	BS	5	168	2.5	4.5	3.5	1.1	157	chr3L	5926349	intron	Vap-33B +	chr3L	5926428	intron	Vap-33B +	chr3L	5926506	intron	Vap-33B +	chr3L_5_5925001	chr3L_5925001	RAL-884
599	chr3L	6001679	6001709	chr3L	6004379	6004409	jockey	5	2697	2.0	0.5	1.2	2.3	2730	chr3L	6001679	intron	PVRAP +	chr3L	6003044	intron	PVRAP +	chr3L	6004409	intron	PVRAP +	chr3L_5_6000001	chr3L_6000001	RAL-884
603	chr3L	6220920	6220945	chr3L	6230067	6230092	roo	6	9150	2.5	6.0	4.2	1.2	9172	chr3L	6220920	5` UTR	pncr008:3L +	chr3L	6225506	intergenic	not near genes	chr3L	6230092	intergenic	not near genes	chr3L_6_6225001	chr3L_6225001	RAL-884
604	chr3L	6335035	6335043	chr3L	6335490	6335514	297	4	466	0.5	4.0	2.2	1.2	479	chr3L	6335035	intron	CG13300 -	chr3L	6335274	intron	CG13300 -	chr3L	6335514	intron	CG13300 -	chr3L_4_6335001	chr3L_6335001	RAL-884
608	chr3L	6855935	6855952	chr3L	6860718	6860733	Doc	4	4783	1.5	4.0	2.8	1.1	4798	chr3L	6855935	intergenic	not near genes	chr3L	6858334	intergenic	not near genes	chr3L	6860733	intergenic	not near genes	chr3L_4_6855001	chr3L_6855001	RAL-884
614	chr3L	7498756	7498779	chr3L	7503533	7503556	F-element	5	4776	2.0	1.0	1.5	2.0	4800	chr3L	7498756	5` UTR	CG8539 -	chr3L	7501156	intergenic	not near genes	chr3L	7503556	intergenic	not near genes	chr3L_5_7500001	chr3L_7500001	RAL-884
616	chr3L	7793719	7793742	chr3L	7800767	7800794	297	7	7050	2.5	2.5	2.5	2.0	7075	chr3L	7793719	intron	CG32369 -	chr3L	7797256	intron	CG32369 -	chr3L	7800794	intron	CG32369 -	chr3L_7_7795001	chr3L_7795001	RAL-884
618	chr3L	7886517	7886545	chr3L	7889035	7889063	Stalker4	6	2517	2.0	1.0	1.5	2.4	2546	chr3L	7886517	intron	CG32365 +	chr3L	7887790	intron	CG32365 +	chr3L	7889063	intron	CG32365 +	chr3L_6_7885001	chr3L_7885001	RAL-884
619	chr3L	7985368	7985394	chr3L	7987693	7987722	NOF	8	2327	3.5	2.5	3.0	2.0	2354	chr3L	7985368	intron	nmo +	chr3L	7986545	intron	nmo +	chr3L	7987722	intron	nmo +	chr3L_8_7985001	chr3L_7985001	RAL-884
622	chr3L	8498300	8498328	chr3L	8505764	8505795	blood	5	7457	1.0	1.0	1.0	2.5	7495	chr3L	8498300	intron	CG43163 -	chr3L	8502048	intron	CG43163 -	chr3L	8505795	intron	CG43163 -	chr3L_5_8500001	chr3L_8500001	RAL-884
628	chr3L	9076932	9076941	chr3L	9084492	9084500	412	4	7560	7.5	7.5	7.5	0.5	7568	chr3L	9076932	exon	Tequila +	chr3L	9080716	intron	Tequila +	chr3L	9084500	exon	Tequila +	chr3L_4_9080001	chr3L_9080001	RAL-884
629	chr3L	9130556	9130580	chr3L	9134317	9134335	412	6	3759	5.0	1.5	3.2	1.4	3779	chr3L	9130556	intergenic	bol -	chr3L	9132446	intergenic	not near genes	chr3L	9134335	intergenic	Dhpr +	chr3L_6_9130001	chr3L_9130001	RAL-884
630	chr3L	9164706	9164722	chr3L	9166173	9166189	hobo	4	1466	2.5	1.0	1.8	1.4	1483	chr3L	9164706	intron	Rdl -	chr3L	9165448	intron	Rdl -	chr3L	9166189	intron	Rdl -	chr3L_4_9165001	chr3L_9165001	RAL-884
632	chr3L	9443507	9443536	chr3L	9445298	9445299	S-element	6	1783	1.5	2.5	2.0	2.0	1792	chr3L	9443507	intron	CG33926 +	chr3L	9444403	intron	CG33926 +	chr3L	9445299	intron	CG33926 +	chr3L_6_9440001	chr3L_9440001	RAL-884
633	chr3L	9501703	9501732	chr3L	9502189	9502203	roo	8	484	0.0	3.5	1.8	2.9	500	chr3L	9501703	intron	path -	chr3L	9501953	intron	path -	chr3L	9502203	intron	path -	chr3L_8_9500001	chr3L_9500001	RAL-884
635	chr3L	9571902	9571937	chr3L	9572250	9572285	jockey	4	346	1.5	0.5	1.0	2.0	383	chr3L	9571902	intron	CG42673 +	chr3L	9572094	intron	CG42673 +	chr3L	9572285	intron	CG42673 +	chr3L_4_9570001	chr3L_9570001	RAL-884
636	chr3L	9575910	9575944	chr3L	9580984	9581019	jockey	9	5076	5.0	4.0	4.5	1.6	5109	chr3L	9575910	intron	CG42673 +	chr3L	9578464	intron	CG42673 +	chr3L	9581019	intron	CG42673 +	chr3L_9_9575001	chr3L_9575001	RAL-884
646	chr3L	10414955	10414979	chr3L	10417309	10417314	Doc	5	2359	0.5	2.0	1.2	2.3	2359	chr3L	10414955	intergenic	CG12362 +	chr3L	10416134	intergenic	not near genes	chr3L	10417314	intergenic	not near genes	chr3L_5_10415001	chr3L_10415001	RAL-884
653	chr3L	11264473	11264480	chr3L	11271425	11271432	17.6	4	6952	2.5	2.5	2.5	1.1	6959	chr3L	11264473	intergenic	not near genes	chr3L	11267952	intergenic	not near genes	chr3L	11271432	intergenic	not near genes	chr3L_4_11265001	chr3L_11265001	RAL-884
658	chr3L	11723085	11723109	chr3L	11727880	11727904	Doc	4	4795	2.5	1.5	2.0	1.3	4819	chr3L	11723085	3` UTR	Bmcp +	chr3L	11725494	intron	Bmcp +	chr3L	11727904	3` UTR	Bmcp +	chr3L_4_11725001	chr3L_11725001	RAL-884
662	chr3L	11864556	11864576	chr3L	11865850	11865855	pogo	4	1291	5.0	3.0	4.0	0.8	1299	chr3L	11864556	intron	CG44837 -	chr3L	11865206	intron	CG44837 -	chr3L	11865855	intron	CG44837 -	chr3L_4_11865001	chr3L_11865001	RAL-884
671	chr3L	12919278	12919308	chr3L	12924760	12924772	Rt1c	6	5475	5.5	1.5	3.5	1.3	5494	chr3L	12919278	intergenic	not near genes	chr3L	12922025	intergenic	not near genes	chr3L	12924772	intergenic	not near genes	chr3L_6_12920001	chr3L_12920001	RAL-884
673	chr3L	12957805	12957813	chr3L	12962287	12962295	copia	6	4482	5.0	5.5	5.2	1.0	4490	chr3L	12957805	intergenic	not near genes	chr3L	12960050	intergenic	not near genes	chr3L	12962295	intergenic	not near genes	chr3L_6_12960001	chr3L_12960001	RAL-884
684	chr3L	13525154	13525190	chr3L	13532950	13532984	roo	10	7792	4.0	3.5	3.8	2.1	7830	chr3L	13525154	intergenic	not near genes	chr3L	13529069	intergenic	not near genes	chr3L	13532984	intergenic	not near genes	chr3L_10_13525001	chr3L_13525001	RAL-884
687	chr3L	13804547	13804573	chr3L	13822831	13822858	roo	6	18285	2.5	1.5	2.0	2.0	18311	chr3L	13804547	intergenic	not near genes	chr3L	13813702	intergenic	not near genes	chr3L	13822858	intergenic	not near genes	chr3L_6_13810001	chr3L_13810001	RAL-884
695	chr3L	14245570	14245578	chr3L	14245664	14245671	1360	4	93	3.0	1.5	2.2	1.2	101	chr3L	14245570	3` UTR	CR44561 -	chr3L	14245620	3` UTR	CR44561 -	chr3L	14245671	3` UTR	CR44561 -	chr3L_4_14245001	chr3L_14245001	RAL-884
696	chr3L	14267385	14267393	chr3L	14271814	14271833	F-element	4	4435	5.0	2.0	3.5	0.9	4448	chr3L	14267385	intergenic	not near genes	chr3L	14269609	intergenic	not near genes	chr3L	14271833	intergenic	not near genes	chr3L_4_14265001	chr3L_14265001	RAL-884
699	chr3L	14312037	14312057	chr3L	14316832	14316856	X-element	6	4797	3.0	2.5	2.8	1.6	4819	chr3L	14312037	exon	fz +	chr3L	14314446	intron	fz +	chr3L	14316856	intron	fz +	chr3L_6_14310001	chr3L_14310001	RAL-884
701	chr3L	14468449	14468476	chr3L	14473654	14473682	copia	4	5206	0.5	1.0	0.8	2.2	5233	chr3L	14468449	intron	bbg -	chr3L	14471066	intron	bbg -	chr3L	14473682	intron	bbg -	chr3L_4_14470001	chr3L_14470001	RAL-884
704	chr3L	14721184	14721205	chr3L	14723024	14723033	Rt1c	8	1839	4.5	4.5	4.5	1.5	1849	chr3L	14721184	intron	ome +	chr3L	14722108	intron	ome +	chr3L	14723033	intron	ome +	chr3L_8_14720001	chr3L_14720001	RAL-884
726	chr3L	16616510	16616539	chr3L	16621837	16621867	297	7	5327	1.0	1.0	1.0	3.5	5357	chr3L	16616510	3` UTR	Abl -	chr3L	16619188	3` UTR	Abl -	chr3L	16621867	3` UTR	Abl -	chr3L_7_16615001	chr3L_16615001	RAL-884
727	chr3L	16684018	16684049	chr3L	16689238	16689270	copia	6	5219	0.5	2.5	1.5	2.4	5252	chr3L	16684018	intron,intron	Lasp -,CG43954 -	chr3L	16686644	intron,intron	Lasp -,CG43954 -	chr3L	16689270	intron,intron,5` UTR	Lasp -,CG43954 -,CR45179 +	chr3L_6_16685001	chr3L_16685001	RAL-884
731	chr3L	16945727	16945759	chr3L	16954878	16954887	roo	17	9148	2.5	1.0	1.8	6.1	9160	chr3L	16945727	exon	Obp73a +	chr3L	16950307	intergenic	not near genes	chr3L	16954887	5` UTR	Nc73EF +	chr3L_17_16950001	chr3L_16950001	RAL-884
732	chr3L	17034932	17034967	chr3L	17035120	17035120	G2	5	179	0.5	0.5	0.5	3.3	188	chr3L	17034932	intergenic	not near genes	chr3L	17035026	intergenic	not near genes	chr3L	17035120	intergenic	not near genes	chr3L_5_17035001	chr3L_17035001	RAL-884
733	chr3L	17085013	17085036	chr3L	17094162	17094185	roo	4	9148	2.5	3.0	2.8	1.1	9172	chr3L	17085013	intron	Rbp6 -	chr3L	17089599	intron	Rbp6 -	chr3L	17094185	intron	Rbp6 -	chr3L_4_17085001	chr3L_17085001	RAL-884
743	chr3L	18528635	18528648	chr3L	18537796	18537809	roo	4	9161	5.5	1.0	3.2	1.0	9174	chr3L	18528635	intergenic	not near genes	chr3L	18533222	intergenic	not near genes	chr3L	18537809	intergenic	not near genes	chr3L_4_18530001	chr3L_18530001	RAL-884
747	chr3L	18593958	18593976	chr3L	18595930	18595944	Doc	5	1975	1.0	0.5	0.8	2.8	1986	chr3L	18593958	intergenic	term -	chr3L	18594951	intergenic	not near genes	chr3L	18595944	intergenic	CR45389 +	chr3L_5_18590001	chr3L_18590001	RAL-884
752	chr3L	18772407	18772439	chr3L	18781087	18781120	roo	9	8681	3.0	4.5	3.8	1.9	8713	chr3L	18772407	intron	ftz-f1 -	chr3L	18776764	intron	ftz-f1 -	chr3L	18781120	intron	ftz-f1 -	chr3L_9_18775001	chr3L_18775001	RAL-884
756	chr3L	19115642	19115664	chr3L	19115814	19115841	BS	4	176	3.5	2.0	2.8	1.1	199	chr3L	19115642	intron	CG14082 -	chr3L	19115742	intron	CG14082 -	chr3L	19115841	intron	CG14082 -	chr3L_4_19115001	chr3L_19115001	RAL-884
757	chr3L	19117045	19117076	chr3L	19124491	19124523	mdg1	8	7443	2.0	4.0	3.0	2.0	7478	chr3L	19117045	intron	CG14082 -	chr3L	19120784	intron	CG14082 -	chr3L	19124523	intron	CG14082 -	chr3L_8_19120001	chr3L_19120001	RAL-884
763	chr3L	19208063	19208092	chr3L	19209431	19209462	Doc	10	1370	5.5	4.0	4.8	1.7	1399	chr3L	19208063	intron	fz2 -	chr3L	19208762	intron	fz2 -	chr3L	19209462	intron	fz2 -	chr3L_10_19205001	chr3L_19205001	RAL-884
769	chr3L	19861820	19861852	chr3L	19863608	19863640	S-element	7	1785	2.5	2.5	2.5	2.0	1820	chr3L	19861820	5` UTR	CR45433 +	chr3L	19862730	intergenic	not near genes	chr3L	19863640	intergenic	not near genes	chr3L_7_19860001	chr3L_19860001	RAL-884
780	chr3L	20476770	20476786	chr3L	20484366	20484383	springer	4	7594	3.5	3.5	3.5	0.9	7613	chr3L	20476770	3` UTR	isoQC +	chr3L	20480576	intergenic	not near genes	chr3L	20484383	3` UTR	ZnT77C -	chr3L_4_20480001	chr3L_20480001	RAL-884
781	chr3L	20590077	20590096	chr3L	20590601	20590635	412	4	529	1.5	4.0	2.8	1.1	558	chr3L	20590077	intergenic	not near genes	chr3L	20590356	intergenic	not near genes	chr3L	20590635	intergenic	not near genes	chr3L_4_20590001	chr3L_20590001	RAL-884
789	chr3L	21014944	21014947	chr3L	21023396	21023414	Tirant	4	8464	4.0	1.5	2.8	1.1	8470	chr3L	21014944	intron	skd -	chr3L	21019179	intron	skd -	chr3L	21023414	intron	skd -	chr3L_4_21015001	chr3L_21015001	RAL-884
792	chr3L	21151872	21151895	chr3L	21156955	21156979	flea	5	5083	3.5	3.0	3.2	1.2	5107	chr3L	21151872	intron	Ac78C -	chr3L	21154426	intron	Ac78C -	chr3L	21156979	intron	Ac78C -	chr3L_5_21150001	chr3L_21150001	RAL-884
795	chr3L	21243753	21243764	chr3L	21251316	21251327	412	5	7562	1.5	7.5	4.5	0.9	7574	chr3L	21243753	intron	Eip78C +	chr3L	21247540	intron	Eip78C +	chr3L	21251327	intron	Eip78C +	chr3L_5_21245001	chr3L_21245001	RAL-884
796	chr3L	21306150	21306166	chr3L	21315309	21315313	roo	4	9156	4.0	1.0	2.5	1.1	9163	chr3L	21306150	3` UTR,3` UTR	CG7632 +,Pc -	chr3L	21310732	intron	Pc -	chr3L	21315313	3` UTR	Pc -	chr3L_4_21310001	chr3L_21310001	RAL-884
799	chr3L	21498838	21498870	chr3L	21500474	21500480	1360	7	1632	2.0	6.5	4.2	1.3	1642	chr3L	21498838	intron	Glg1 -	chr3L	21499659	intron	Glg1 -	chr3L	21500480	intron	Glg1 -	chr3L_7_21495001	chr3L_21495001	RAL-884
801	chr3L	21749326	21749347	chr3L	21754481	21754487	Doc	6	5155	6.5	4.0	5.2	1.0	5161	chr3L	21749326	intron	Syn1 -	chr3L	21751906	intron	Syn1 -	chr3L	21754487	intron	Syn1 -	chr3L_6_21750001	chr3L_21750001	RAL-884
805	chr3L	22617198	22617220	chr3L	22624650	22624672	blood	5	7451	3.0	2.0	2.5	1.4	7474	chr3L	22617198	intron	CG14459 -	chr3L	22620935	intron	CG14459 -	chr3L	22624672	intron	CG14459 -	chr3L_5_22620001	chr3L_22620001	RAL-884
808	chr3L	22761415	22761418	chr3L	22766820	22766851	Ivk	4	5420	0.5	1.5	1.0	2.0	5436	chr3L	22761415	intron	SPoCk +	chr3L	22764133	intron	SPoCk +	chr3L	22766851	intron	SPoCk +	chr3L_4_22760001	chr3L_22760001	RAL-884
811	chr3L	22865985	22866000	chr3L	22867118	22867119	Doc	5	1129	5.0	3.5	4.2	1.0	1134	chr3L	22865985	intron	CG33170 +	chr3L	22866552	intron	CG33170 +	chr3L	22867119	intron	CG33170 +	chr3L_5_22865001	chr3L_22865001	RAL-884
812	chr3L	24012408	24012429	chr3L	24020744	24020770	roo	4	8334	4.0	1.5	2.8	1.1	8362	chr3L	24012408	intergenic	not near genes	chr3L	24016589	intergenic	not near genes	chr3L	24020770	intergenic	not near genes	chr3L_4_24015001	chr3L_24015001	RAL-884
815	chr3L	27727646	27727658	chr3L	27728740	27728751	G-element	7	1100	3.0	5.0	4.0	1.4	1105	chr3L	27727646	intergenic	not near genes	chr3L	27728198	intergenic	not near genes	chr3L	27728751	intergenic	not near genes	chr3L_7_27725001	chr3L_27725001	RAL-884
820	chr3R	4206069	4206103	chr3R	4211644	4211676	mdg3	5	5574	3.0	1.5	2.2	1.6	5607	chr3R	4206069	intron	CG14636 -	chr3R	4208872	intron	CG14636 -	chr3R	4211676	intron	CG14636 -	chr3R_5_4205001	chr3R_4205001	RAL-884
821	chr3R	4408413	4408442	chr3R	4412708	4412746	Juan	7	4302	1.5	1.0	1.2	3.2	4333	chr3R	4408413	intron	CG32944 -	chr3R	4410580	intron	CG32944 -	chr3R	4412746	intron	CG32944 -	chr3R_7_4410001	chr3R_4410001	RAL-884
822	chr3R	4609550	4609583	chr3R	4610714	4610723	1360	5	1156	8.0	7.0	7.5	0.6	1173	chr3R	4609550	intergenic	not near genes	chr3R	4610136	intergenic	not near genes	chr3R	4610723	intergenic	not near genes	chr3R_5_4610001	chr3R_4610001	RAL-884
824	chr3R	4753255	4753272	chr3R	4757551	4757558	F-element	4	4297	4.5	4.5	4.5	0.7	4303	chr3R	4753255	intron,intron	atms +,CG44098 -	chr3R	4755406	intron,intron	atms +,CG44098 -	chr3R	4757558	intron,exon	atms +,CG44098 -	chr3R_4_4755001	chr3R_4755001	RAL-884
825	chr3R	4759717	4759752	chr3R	4761214	4761249	hopper2	7	1497	4.5	5.5	5.0	1.2	1532	chr3R	4759717	intron,intron	atms +,CG44098 -	chr3R	4760483	intron,intron	atms +,CG44098 -	chr3R	4761249	intron,intron	atms +,CG44098 -	chr3R_7_4760001	chr3R_4760001	RAL-884
828	chr3R	4887487	4887512	chr3R	4894864	4894889	rover	4	7371	3.5	3.5	3.5	0.9	7402	chr3R	4887487	intergenic	not near genes	chr3R	4891188	intergenic	not near genes	chr3R	4894889	intergenic	not near genes	chr3R_4_4890001	chr3R_4890001	RAL-884
831	chr3R	5067987	5068007	chr3R	5073504	5073524	mdg3	5	5517	4.0	3.0	3.5	1.1	5537	chr3R	5067987	intergenic	not near genes	chr3R	5070756	intergenic	not near genes	chr3R	5073524	intergenic	not near genes	chr3R_5_5070001	chr3R_5070001	RAL-884
834	chr3R	5338398	5338429	chr3R	5343575	5343589	Rt1c	11	5173	3.0	6.0	4.5	2.0	5191	chr3R	5338398	intron	mtd -	chr3R	5340994	intron	mtd -	chr3R	5343589	intron	mtd -	chr3R_11_5340001	chr3R_5340001	RAL-884
835	chr3R	5445959	5445993	chr3R	5452419	5452453	Burdock	5	6460	1.5	0.5	1.0	2.5	6494	chr3R	5445959	intron	CG14669 +	chr3R	5449206	intron	CG14669 +	chr3R	5452453	intron	CG14669 +	chr3R_5_5445001	chr3R_5445001	RAL-884
837	chr3R	5746015	5746043	chr3R	5746256	5746284	pogo	10	235	2.0	3.0	2.5	2.9	269	chr3R	5746015	3` UTR	Madm +	chr3R	5746150	3` UTR	Madm +	chr3R	5746284	3` UTR	Madm +	chr3R_10_5745001	chr3R_5745001	RAL-884
838	chr3R	5809119	5809135	chr3R	5809359	5809360	pogo	5	237	2.5	2.5	2.5	1.4	241	chr3R	5809119	3` UTR	CG11000 +	chr3R	5809240	3` UTR	CG11000 +	chr3R	5809360	3` UTR	CG11000 +	chr3R_5_5805001	chr3R_5805001	RAL-884
839	chr3R	5822381	5822411	chr3R	5823547	5823575	1360	6	1166	1.5	3.5	2.5	1.7	1194	chr3R	5822381	3` UTR	CG2023 -	chr3R	5822978	3` UTR	CG2023 -	chr3R	5823575	3` UTR	CG2023 -	chr3R_6_5820001	chr3R_5820001	RAL-884
842	chr3R	5927563	5927586	chr3R	5927801	5927826	pogo	10	237	5.0	3.0	4.0	2.0	263	chr3R	5927563	intron	CG34113 -	chr3R	5927694	intron	CG34113 -	chr3R	5927826	intron	CG34113 -	chr3R_10_5925001	chr3R_5925001	RAL-884
844	chr3R	6158518	6158540	chr3R	6167096	6167120	Tirant	5	8581	4.5	6.0	5.2	0.8	8602	chr3R	6158518	intergenic	not near genes	chr3R	6162819	intergenic	not near genes	chr3R	6167120	intergenic	CG1077 +	chr3R_5_6160001	chr3R_6160001	RAL-884
845	chr3R	6175171	6175202	chr3R	6182443	6182469	HMS-Beagle2	5	7271	1.5	1.0	1.2	2.3	7298	chr3R	6175171	intergenic	Osi1 +	chr3R	6178820	intron	CR45194 +	chr3R	6182469	intergenic	CR45194 +	chr3R_5_6175001	chr3R_6175001	RAL-884
846	chr3R	6510025	6510058	chr3R	6515106	6515139	jockey	4	5077	1.5	0.5	1.0	2.0	5114	chr3R	6510025	intergenic	not near genes	chr3R	6512582	intergenic	not near genes	chr3R	6515139	intergenic	not near genes	chr3R_4_6510001	chr3R_6510001	RAL-884
848	chr3R	6737501	6737521	chr3R	6739285	6739307	Doc	7	1782	4.0	1.5	2.8	1.8	1806	chr3R	6737501	intron	pb -	chr3R	6738404	intron	pb -	chr3R	6739307	intron	pb -	chr3R_7_6735001	chr3R_6735001	RAL-884
856	chr3R	7849650	7849668	chr3R	7850817	7850835	1360	4	1167	0.5	3.5	2.0	1.3	1185	chr3R	7849650	intron	CG34384 +	chr3R	7850242	intron	CG34384 +	chr3R	7850835	intron	CG34384 +	chr3R_4_7850001	chr3R_7850001	RAL-884
861	chr3R	8403024	8403039	chr3R	8412176	8412205	roo	8	9162	3.5	4.0	3.8	1.7	9181	chr3R	8403024	intron	CG45263 -	chr3R	8407614	intron	CG45263 -	chr3R	8412205	intron	CG45263 -	chr3R_8_8405001	chr3R_8405001	RAL-884
862	chr3R	8570479	8570500	chr3R	8575115	8575132	HMS-Beagle	7	4634	4.0	2.0	3.0	1.8	4653	chr3R	8570479	intergenic	not near genes	chr3R	8572806	intergenic	not near genes	chr3R	8575132	intergenic	not near genes	chr3R_7_8570001	chr3R_8570001	RAL-884
863	chr3R	8601771	8601796	chr3R	8610919	8610949	roo	7	9143	5.5	6.5	6.0	1.0	9178	chr3R	8601771	intron	5-HT2B +	chr3R	8606360	intron	5-HT2B +	chr3R	8610949	intron	5-HT2B +	chr3R_7_8605001	chr3R_8605001	RAL-884
869	chr3R	9319591	9319608	chr3R	9320009	9320032	jockey	6	427	3.0	3.0	3.0	1.5	441	chr3R	9319591	intron	CG8861 -	chr3R	9319812	intron	CG8861 -	chr3R	9320032	intron	CG8861 -	chr3R_6_9315001	chr3R_9315001	RAL-884
888	chr3R	11379234	11379259	chr3R	11388389	11388389	roo	4	9149	2.5	1.0	1.8	1.4	9155	chr3R	11379234	intron	pros +	chr3R	11383812	intron	pros +	chr3R	11388389	intron	pros +	chr3R_4_11380001	chr3R_11380001	RAL-884
893	chr3R	11841059	11841099	chr3R	11846250	11846265	BS	13	5184	1.5	1.0	1.2	5.9	5206	chr3R	11841059	intron	CG6959 -	chr3R	11843662	intron	CG6959 -	chr3R	11846265	intron	CG6959 -	chr3R_13_11840001	chr3R_11840001	RAL-884
901	chr3R	12920167	12920183	chr3R	12925360	12925384	copia	7	5197	5.0	5.0	5.0	1.2	5217	chr3R	12920167	intron	beat-Vb +	chr3R	12922776	intron	beat-Vb +	chr3R	12925384	intron	beat-Vb +	chr3R_7_12920001	chr3R_12920001	RAL-884
902	chr3R	13143042	13143065	chr3R	13148617	13148619	mdg3	5	5568	3.0	5.0	4.0	1.0	5577	chr3R	13143042	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13145830	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13148619	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_5_13145001	chr3R_13145001	RAL-884
913	chr3R	14021659	14021677	chr3R	14023472	14023474	S-element	5	1811	1.0	3.5	2.2	1.6	1815	chr3R	14021659	intron	rdx -	chr3R	14022566	intron	rdx -	chr3R	14023474	intron	rdx -	chr3R_5_14020001	chr3R_14020001	RAL-884
914	chr3R	14246415	14246418	chr3R	14247882	14247902	jockey	5	1478	2.5	2.5	2.5	1.4	1487	chr3R	14246415	intergenic	not near genes	chr3R	14247158	intergenic	not near genes	chr3R	14247902	intergenic	not near genes	chr3R_5_14245001	chr3R_14245001	RAL-884
923	chr3R	15132062	15132075	chr3R	15135119	15135135	Juan	6	3059	4.0	6.0	5.0	1.0	3073	chr3R	15132062	intergenic	CG42788 -	chr3R	15133598	intergenic	not near genes	chr3R	15135135	intergenic	CG6912 -	chr3R_6_15130001	chr3R_15130001	RAL-884
925	chr3R	15601163	15601196	chr3R	15608685	15608718	412	11	7517	4.0	3.0	3.5	2.4	7555	chr3R	15601163	intergenic	not near genes	chr3R	15604940	intergenic	not near genes	chr3R	15608718	intergenic	not near genes	chr3R_11_15600001	chr3R_15600001	RAL-884
926	chr3R	15618751	15618763	chr3R	15626203	15626237	blood	6	7470	1.5	1.0	1.2	2.7	7486	chr3R	15618751	intergenic	not near genes	chr3R	15622494	intergenic	not near genes	chr3R	15626237	intergenic	not near genes	chr3R_6_15620001	chr3R_15620001	RAL-884
933	chr3R	16756328	16756348	chr3R	16762519	16762535	diver	8	6187	3.0	3.0	3.0	2.0	6207	chr3R	16756328	intron	bxd -	chr3R	16759432	intron	bxd -	chr3R	16762535	intron	bxd -	chr3R_8_16755001	chr3R_16755001	RAL-884
936	chr3R	17294660	17294687	chr3R	17295088	17295112	BS	5	427	3.0	0.5	1.8	1.8	452	chr3R	17294660	intergenic	not near genes	chr3R	17294886	intergenic	not near genes	chr3R	17295112	intergenic	not near genes	chr3R_5_17290001	chr3R_17290001	RAL-884
938	chr3R	17346701	17346719	chr3R	17348264	17348267	F-element	5	1560	2.0	6.5	4.2	1.0	1566	chr3R	17346701	intron	beat-IIa -	chr3R	17347484	intron	beat-IIa -	chr3R	17348267	intron	beat-IIa -	chr3R_5_17345001	chr3R_17345001	RAL-884
943	chr3R	17925862	17925889	chr3R	17927317	17927356	hobo	11	1464	2.0	5.0	3.5	2.4	1494	chr3R	17925862	intron	cpo +	chr3R	17926609	intron	cpo +	chr3R	17927356	intron	cpo +	chr3R_11_17925001	chr3R_17925001	RAL-884
947	chr3R	18606509	18606531	chr3R	18610740	18610746	F-element	9	4228	1.5	1.0	1.2	4.1	4237	chr3R	18606509	intron,intron	qin +,CG14304 -	chr3R	18608628	intron,intron	qin +,CG14304 -	chr3R	18610746	intron,intron	qin +,CG14304 -	chr3R_9_18605001	chr3R_18605001	RAL-884
959	chr3R	20109536	20109568	chr3R	20114742	20114774	copia	6	5206	0.0	0.5	0.2	5.0	5238	chr3R	20109536	intergenic	not near genes	chr3R	20112155	intergenic	not near genes	chr3R	20114774	intergenic	CG10887 +	chr3R_6_20110001	chr3R_20110001	RAL-884
962	chr3R	20266521	20266544	chr3R	20272988	20273015	Burdock	4	6466	1.0	1.5	1.2	1.8	6494	chr3R	20266521	intron	cic +	chr3R	20269768	intron	cic +	chr3R	20273015	intron	cic +	chr3R_4_20265001	chr3R_20265001	RAL-884
975	chr3R	21609007	21609042	chr3R	21611641	21611655	NOF	7	2626	3.0	11.0	7.0	0.9	2648	chr3R	21609007	intron	InR -	chr3R	21610331	intron	InR -	chr3R	21611655	intron	InR -	chr3R_7_21610001	chr3R_21610001	RAL-884
976	chr3R	21761134	21761146	chr3R	21768511	21768520	mdg1	4	7384	6.5	4.0	5.2	0.6	7386	chr3R	21761134	exon	CG42335 +	chr3R	21764827	intron	CG42335 +	chr3R	21768520	exon	CG42335 +	chr3R_4_21760001	chr3R_21760001	RAL-884
986	chr3R	22234684	22234715	chr3R	22236003	22236016	pogo	6	1312	1.0	1.0	1.0	3.0	1332	chr3R	22234684	intron	SKIP +	chr3R	22235350	intron	SKIP +	chr3R	22236016	intron	SKIP +	chr3R_6_22235001	chr3R_22235001	RAL-884
1000	chr3R	23558398	23558429	chr3R	23560179	23560210	Bari1	7	1781	0.5	2.0	1.2	3.2	1812	chr3R	23558398	intron	beat-IV +	chr3R	23559304	intron	beat-IV +	chr3R	23560210	intron	beat-IV +	chr3R_7_23555001	chr3R_23555001	RAL-884
1003	chr3R	24072088	24072111	chr3R	24072525	24072548	jockey	6	436	5.0	2.0	3.5	1.3	460	chr3R	24072088	intron	4EHP -	chr3R	24072318	intron	4EHP -	chr3R	24072548	intron	4EHP -	chr3R_6_24070001	chr3R_24070001	RAL-884
1004	chr3R	24207212	24207241	chr3R	24212289	24212317	flea	5	5076	4.0	1.5	2.8	1.3	5105	chr3R	24207212	intron	twin -	chr3R	24209764	intron	twin -	chr3R	24212317	intron	twin -	chr3R_5_24205001	chr3R_24205001	RAL-884
1007	chr3R	24493277	24493298	chr3R	24493503	24493520	BS	7	224	3.0	3.5	3.2	1.7	243	chr3R	24493277	intergenic	not near genes	chr3R	24493398	intergenic	not near genes	chr3R	24493520	intergenic	not near genes	chr3R_7_24490001	chr3R_24490001	RAL-884
1008	chr3R	24927135	24927161	chr3R	24931913	24931936	Doc	4	4778	0.5	1.0	0.8	2.2	4801	chr3R	24927135	intergenic	Trf4-2 +	chr3R	24929536	intergenic	not near genes	chr3R	24931936	intergenic	CG11771 +	chr3R_4_24925001	chr3R_24925001	RAL-884
1017	chr3R	25832701	25832723	chr3R	25841883	25841905	roo	12	9180	2.5	6.5	4.5	2.2	9204	chr3R	25832701	exon	alpha4GT2 +	chr3R	25837303	intron	alpha4GT2 +	chr3R	25841905	exon	alpha4GT2 +	chr3R_12_25835001	chr3R_25835001	RAL-884
1027	chr3R	26376354	26376358	chr3R	26385501	26385518	roo	4	9149	3.5	0.5	2.0	1.3	9164	chr3R	26376354	intergenic	not near genes	chr3R	26380936	intergenic	not near genes	chr3R	26385518	intergenic	not near genes	chr3R_4_26380001	chr3R_26380001	RAL-884
1029	chr3R	26558335	26558361	chr3R	26565638	26565659	Stalker4	9	7303	4.0	4.0	4.0	1.8	7324	chr3R	26558335	intron	scrib +	chr3R	26561997	intron	scrib +	chr3R	26565659	intron	scrib +	chr3R_9_26560001	chr3R_26560001	RAL-884
1030	chr3R	26642731	26642756	chr3R	26643124	26643150	jockey	6	393	4.5	2.5	3.5	1.3	419	chr3R	26642731	intergenic	not near genes	chr3R	26642940	intergenic	not near genes	chr3R	26643150	intergenic	not near genes	chr3R_6_26640001	chr3R_26640001	RAL-884
1035	chr3R	26810557	26810584	chr3R	26811036	26811051	roo	6	473	1.5	4.5	3.0	1.5	494	chr3R	26810557	intron	Tl +	chr3R	26810804	intron	Tl +	chr3R	26811051	intron	Tl +	chr3R_6_26810001	chr3R_26810001	RAL-884
1038	chr3R	27140515	27140547	chr3R	27148124	27148157	412	17	7605	5.0	1.5	3.2	4.0	7642	chr3R	27140515	intron	CG6051 -	chr3R	27144336	intron	CG6051 -	chr3R	27148157	intron	CG6051 -	chr3R_17_27140001	chr3R_27140001	RAL-884
1039	chr3R	27342799	27342822	chr3R	27351377	27351403	Tirant	11	8580	2.5	4.5	3.5	2.4	8604	chr3R	27342799	intron	CG42534 +	chr3R	27347101	intron	CG42534 +	chr3R	27351403	intron	CG42534 +	chr3R_11_27345001	chr3R_27345001	RAL-884
1045	chr3R	27725567	27725584	chr3R	27731009	27731026	I-element	6	5442	3.5	2.0	2.8	1.6	5459	chr3R	27725567	intergenic	not near genes	chr3R	27728296	intergenic	not near genes	chr3R	27731026	intergenic	not near genes	chr3R_6_27725001	chr3R_27725001	RAL-884
1047	chr3R	27862958	27862978	chr3R	27868263	27868283	Transpac	5	5305	1.5	1.5	1.5	2.0	5325	chr3R	27862958	intron	CG34353 -	chr3R	27865620	intron	CG34353 -	chr3R	27868283	intron	CG34353 -	chr3R_5_27865001	chr3R_27865001	RAL-884
1048	chr3R	27875708	27875723	chr3R	27882754	27882778	297	8	7051	2.0	2.0	2.0	2.7	7070	chr3R	27875708	intron	CG34353 -	chr3R	27879243	intron	CG34353 -	chr3R	27882778	intron	CG34353 -	chr3R_8_27875001	chr3R_27875001	RAL-884
1051	chr3R	28068493	28068526	chr3R	28073935	28073961	I-element	11	5440	2.0	2.5	2.2	3.4	5468	chr3R	28068493	intron	CG34362 +	chr3R	28071227	intron	CG34362 +	chr3R	28073961	intron	CG34362 +	chr3R_11_28070001	chr3R_28070001	RAL-884
1054	chr3R	28253344	28253361	chr3R	28255854	28255871	jockey	5	2509	2.0	5.0	3.5	1.1	2527	chr3R	28253344	intergenic	not near genes	chr3R	28254608	intergenic	not near genes	chr3R	28255871	intergenic	not near genes	chr3R_5_28250001	chr3R_28250001	RAL-884
1062	chr3R	28758284	28758310	chr3R	28763901	28763901	roo	4	5610	1.5	0.5	1.0	2.0	5617	chr3R	28758284	intergenic	aqrs -	chr3R	28761092	intergenic	not near genes	chr3R	28763901	intergenic	not near genes	chr3R_4_28760001	chr3R_28760001	RAL-884
1067	chr3R	29406616	29406646	chr3R	29407902	29407912	jockey	8	1274	2.5	2.5	2.5	2.3	1296	chr3R	29406616	intron	Ptp99A +	chr3R	29407264	intron	Ptp99A +	chr3R	29407912	intron	Ptp99A +	chr3R_8_29405001	chr3R_29405001	RAL-884
1075	chr3R	30084850	30084885	chr3R	30086316	30086352	hobo	18	1463	0.5	4.0	2.2	5.6	1502	chr3R	30084850	intron	sima +	chr3R	30085601	intron	sima +	chr3R	30086352	intron	sima +	chr3R_18_30085001	chr3R_30085001	RAL-884
1079	chr3R	30480475	30480513	chr3R	30482943	30482981	jockey	9	2464	2.0	5.5	3.8	1.9	2506	chr3R	30480475	intron	PH4alphaEFB +	chr3R	30481728	intron	PH4alphaEFB +	chr3R	30482981	intron	PH4alphaEFB +	chr3R_9_30480001	chr3R_30480001	RAL-884
1083	chr3R	30679517	30679552	chr3R	30686986	30687021	blood	9	7469	3.5	2.5	3.0	2.2	7504	chr3R	30679517	intergenic	not near genes	chr3R	30683269	intergenic	not near genes	chr3R	30687021	intergenic	not near genes	chr3R_9_30680001	chr3R_30680001	RAL-884
1084	chr3R	30818827	30818842	chr3R	30820376	30820407	1360	4	1557	5.0	2.0	3.5	0.9	1580	chr3R	30818827	intron	cindr +	chr3R	30819617	intron	cindr +	chr3R	30820407	intron	cindr +	chr3R_4_30815001	chr3R_30815001	RAL-884
1091	chr3R	31279372	31279408	chr3R	31285563	31285564	diver	8	6186	3.0	2.0	2.5	2.3	6192	chr3R	31279372	intergenic	not near genes	chr3R	31282468	intergenic	not near genes	chr3R	31285564	intergenic	not near genes	chr3R_8_31280001	chr3R_31280001	RAL-884
1092	chr3R	31413101	31413123	chr3R	31418288	31418319	copia	6	5194	3.0	3.0	3.0	1.5	5218	chr3R	31413101	intron	Gprk2 +	chr3R	31415710	intron	Gprk2 +	chr3R	31418319	intron	Gprk2 +	chr3R_6_31415001	chr3R_31415001	RAL-884
1097	chr3R	31691533	31691563	chr3R	31696297	31696328	Doc	11	4761	3.0	7.0	5.0	1.8	4795	chr3R	31691533	intergenic	not near genes	chr3R	31693930	intergenic	not near genes	chr3R	31696328	intergenic	not near genes	chr3R_11_31690001	chr3R_31690001	RAL-884
1105	chr3R	31998003	31998019	chr3R	32005464	32005489	blood	5	7468	2.0	3.5	2.8	1.3	7486	chr3R	31998003	intron	heph -	chr3R	32001746	intron	heph -	chr3R	32005489	intron	heph -	chr3R_5_32000001	chr3R_32000001	RAL-884
1106	chr4	671607	671637	chr4	680186	680212	Tirant	7	8579	3.5	5.5	4.5	1.3	8605	chr4	671607	intron	CG11360 +	chr4	675910	intron	CG11360 +	chr4	680212	intron	CG11360 +	chr4_7_675001	chr4_675001	RAL-884
1116	chrX	827604	827630	chrX	835396	835413	roo	6	7790	1.5	0.0	0.8	3.3	7809	chrX	827604	intron	CG43867 -	chrX	831508	intron	CG43867 -	chrX	835413	intron	CG43867 -	chrX_6_830001	chrX_830001	RAL-884
1117	chrX	906705	906727	chrX	908493	908516	S-element	5	1783	3.5	6.0	4.8	0.9	1811	chrX	906705	intron	CG43867 -	chrX	907610	intron	CG43867 -	chrX	908516	intron	CG43867 -	chrX_5_905001	chrX_905001	RAL-884
1119	chrX	1357777	1357803	chrX	1367947	1367964	Doc	5	10168	2.0	0.5	1.2	2.3	10187	chrX	1357777	intergenic	png -	chrX	1362870	intergenic	not near genes	chrX	1367964	intergenic	not near genes	chrX_5_1360001	chrX_1360001	RAL-884
1120	chrX	1518034	1518074	chrX	1523435	1523476	jockey	4	5399	2.5	2.5	2.5	1.1	5442	chrX	1518034	intergenic	inc +	chrX	1520755	intergenic	not near genes	chrX	1523476	intergenic	not near genes	chrX_4_1520001	chrX_1520001	RAL-884
1124	chrX	2610385	2610390	chrX	2617502	2617507	HMS-Beagle	4	7117	4.0	1.5	2.8	1.1	7122	chrX	2610385	intergenic	CG8636 -	chrX	2613946	intergenic	not near genes	chrX	2617507	intergenic	Tsp3A -	chrX_4_2610001	chrX_2610001	RAL-884
1125	chrX	2664391	2664420	chrX	2665537	2665565	1360	6	1143	0.5	2.5	1.5	2.4	1174	chrX	2664391	intron	sgg +	chrX	2664978	intron	sgg +	chrX	2665565	intron	sgg +	chrX_6_2660001	chrX_2660001	RAL-884
1127	chrX	2844908	2844927	chrX	2852318	2852333	mdg1	4	7408	1.5	2.5	2.0	1.3	7425	chrX	2844908	intron	kirre +	chrX	2848620	intron	kirre +	chrX	2852333	intron	kirre +	chrX_4_2845001	chrX_2845001	RAL-884
1131	chrX	3415017	3415047	chrX	3421202	3421210	3S18	10	6181	0.5	1.0	0.8	5.6	6193	chrX	3415017	intron,intron	CR44999 +,CG12535 -	chrX	3418114	intron,intron	CR44999 +,CG12535 -	chrX	3421210	intron,intron	CR44999 +,CG12535 -	chrX_10_3415001	chrX_3415001	RAL-884
1132	chrX	3493105	3493119	chrX	3502260	3502277	roo	4	9153	3.0	2.0	2.5	1.1	9172	chrX	3493105	intron,intron	CR44999 +,Gas8 -	chrX	3497691	intron,intron	CR44999 +,Gas8 -	chrX	3502277	intron,intron	CR44999 +,Gas8 -	chrX_4_3495001	chrX_3495001	RAL-884
1134	chrX	3597549	3597580	chrX	3619717	3619748	roo	7	22165	1.5	2.0	1.8	2.5	22199	chrX	3597549	intron	AstA-R1 +	chrX	3608648	intron	AstA-R1 +	chrX	3619748	intron	AstA-R1 +	chrX_7_3605001	chrX_3605001	RAL-884
1139	chrX	4157898	4157918	chrX	4164936	4164955	297	4	7039	2.5	2.0	2.2	1.2	7057	chrX	4157898	intron	Fas2 -	chrX	4161426	intron	Fas2 -	chrX	4164955	intron	Fas2 -	chrX_4_4160001	chrX_4160001	RAL-884
1141	chrX	4731813	4731835	chrX	4736906	4736919	jockey	6	5087	5.5	3.0	4.2	1.2	5106	chrX	4731813	intergenic	not near genes	chrX	4734366	intergenic	not near genes	chrX	4736919	intergenic	not near genes	chrX_6_4730001	chrX_4730001	RAL-884
1142	chrX	4827976	4827998	chrX	4835347	4835363	Stalker4	6	7369	3.5	3.5	3.5	1.3	7387	chrX	4827976	intergenic	not near genes	chrX	4831670	intergenic	not near genes	chrX	4835363	intergenic	not near genes	chrX_6_4830001	chrX_4830001	RAL-884
1146	chrX	5884169	5884186	chrX	5884410	5884425	pogo	7	239	2.0	2.0	2.0	2.3	256	chrX	5884169	intron	CR45668 -	chrX	5884297	intron	CR45668 -	chrX	5884425	intron	CR45668 -	chrX_7_5880001	chrX_5880001	RAL-884
1149	chrX	6335226	6335242	chrX	6337726	6337731	Tirant	6	2504	0.0	5.5	2.8	1.6	2505	chrX	6335226	intergenic	not near genes	chrX	6336478	intergenic	not near genes	chrX	6337731	intergenic	CG3842 +	chrX_6_6335001	chrX_6335001	RAL-884
1150	chrX	6605477	6605509	chrX	6608499	6608531	Burdock	5	3017	0.5	2.5	1.5	2.0	3054	chrX	6605477	intron	pigs +	chrX	6607004	intron	pigs +	chrX	6608531	intron	pigs +	chrX_5_6605001	chrX_6605001	RAL-884
1156	chrX	7125250	7125271	chrX	7134408	7134430	roo	4	9158	1.0	2.5	1.8	1.4	9180	chrX	7125250	intergenic	not near genes	chrX	7129840	intergenic	not near genes	chrX	7134430	intergenic	not near genes	chrX_4_7125001	chrX_7125001	RAL-884
1158	chrX	7702915	7702940	chrX	7703335	7703356	jockey	4	428	0.5	3.0	1.8	1.4	441	chrX	7702915	intron	CHES-1-like -	chrX	7703136	intron	CHES-1-like -	chrX	7703356	intron	CHES-1-like -	chrX_4_7700001	chrX_7700001	RAL-884
1159	chrX	7845735	7845758	chrX	7847215	7847246	hopper2	5	1483	2.5	1.5	2.0	1.7	1511	chrX	7845735	intergenic	not near genes	chrX	7846490	intergenic	not near genes	chrX	7847246	intergenic	not near genes	chrX_5_7845001	chrX_7845001	RAL-884
1165	chrX	8922334	8922350	chrX	8922768	8922775	jockey	5	432	3.0	1.0	2.0	1.7	441	chrX	8922334	intron	rdgA +	chrX	8922554	intron	rdgA +	chrX	8922775	intron	rdgA +	chrX_5_8920001	chrX_8920001	RAL-884
1166	chrX	8922355	8922361	chrX	8922758	8922795	jockey	7	426	2.0	1.0	1.5	2.8	440	chrX	8922355	intron	rdgA +	chrX	8922575	intron	rdgA +	chrX	8922795	intron	rdgA +	chrX_7_8920001	chrX_8920001	RAL-884
1167	chrX	8948764	8948789	chrX	8956266	8956292	roo	4	7506	1.0	0.5	0.8	2.2	7528	chrX	8948764	intron	rdgA +	chrX	8952528	intron	rdgA +	chrX	8956292	intron	rdgA +	chrX_4_8950001	chrX_8950001	RAL-884
1169	chrX	9575799	9575818	chrX	9576122	9576142	mdg3	4	322	4.5	3.5	4.0	0.8	343	chrX	9575799	intron,exon	CG32699 -,CG42395 -	chrX	9575970	intron,intron	CG32699 -,CG42395 -	chrX	9576142	intron,5` UTR	CG32699 -,CG42395 -	chrX_4_9575001	chrX_9575001	RAL-884
1174	chrX	10550861	10550881	chrX	10552328	10552332	hobo	5	1463	4.0	3.5	3.8	1.0	1471	chrX	10550861	intron	spri -	chrX	10551596	intron	spri -	chrX	10552332	intron	spri -	chrX_5_10550001	chrX_10550001	RAL-884
1175	chrX	11268575	11268587	chrX	11270054	11270070	hopper2	4	1486	2.5	0.0	1.2	1.8	1495	chrX	11268575	intron	CG44422 -	chrX	11269322	intron	CG44422 -	chrX	11270070	intron	CG44422 -	chrX_4_11265001	chrX_11265001	RAL-884
1178	chrX	11633419	11633426	chrX	11640473	11640480	297	4	7054	4.5	2.5	3.5	0.9	7061	chrX	11633419	intron	Ptp10D +	chrX	11636950	intron	Ptp10D +	chrX	11640480	intron	Ptp10D +	chrX_4_11635001	chrX_11635001	RAL-884
1189	chrX	13429468	13429495	chrX	13430616	13430620	jockey	4	1142	1.0	3.5	2.2	1.2	1152	chrX	13429468	intergenic	not near genes	chrX	13430044	intergenic	not near genes	chrX	13430620	intergenic	not near genes	chrX_4_13430001	chrX_13430001	RAL-884
1193	chrX	14589693	14589708	chrX	14589923	14589949	pogo	5	239	1.0	1.0	1.0	2.5	256	chrX	14589693	intron	CG9413 -	chrX	14589821	intron	CG9413 -	chrX	14589949	intron	CG9413 -	chrX_5_14585001	chrX_14585001	RAL-884
1194	chrX	14636467	14636490	chrX	14641908	14641931	I-element	7	5434	1.0	4.5	2.8	1.8	5464	chrX	14636467	intron	NetA -	chrX	14639199	intron	NetA -	chrX	14641931	intron	NetA -	chrX_7_14635001	chrX_14635001	RAL-884
1196	chrX	14778031	14778057	chrX	14782826	14782853	Doc	6	4792	0.5	2.0	1.2	2.7	4822	chrX	14778031	intergenic	CG5347 +	chrX	14780442	intergenic	not near genes	chrX	14782853	intergenic	Ag5r2 -	chrX_6_14780001	chrX_14780001	RAL-884
1198	chrX	15413053	15413086	chrX	15417355	15417369	Juan	7	4291	3.0	1.5	2.2	2.2	4316	chrX	15413053	intron	Cngl -	chrX	15415211	intron	Cngl -	chrX	15417369	intron	Cngl -	chrX_7_15415001	chrX_15415001	RAL-884
1199	chrX	15421933	15421952	chrX	15423444	15423463	pogo	5	1511	2.5	1.0	1.8	1.8	1530	chrX	15421933	intron	Cngl -	chrX	15422698	intron	Cngl -	chrX	15423463	intron	Cngl -	chrX_5_15420001	chrX_15420001	RAL-884
1203	chrX	16492645	16492676	chrX	16498222	16498247	mdg3	4	5576	2.5	1.5	2.0	1.3	5602	chrX	16492645	intron	para -	chrX	16495446	intron	para -	chrX	16498247	intron	para -	chrX_4_16495001	chrX_16495001	RAL-884
1218	chrX	19060407	19060430	chrX	19065187	19065214	Doc	5	4782	1.0	2.5	1.8	1.8	4807	chrX	19060407	intron	CG14190 +	chrX	19062810	intron	CG14190 +	chrX	19065214	intron	CG14190 +	chrX_5_19060001	chrX_19060001	RAL-884
1226	chrX	19472130	19472145	chrX	19472698	19472710	jockey	4	566	3.5	4.5	4.0	0.8	580	chrX	19472130	intergenic	kek5 +	chrX	19472420	intergenic	not near genes	chrX	19472710	intergenic	not near genes	chrX_4_19470001	chrX_19470001	RAL-884
1227	chrX	19710081	19710098	chrX	19711862	19711884	S-element	8	1778	3.0	3.0	3.0	2.0	1803	chrX	19710081	intron	meso18E -	chrX	19710982	intron	meso18E -	chrX	19711884	intron	meso18E -	chrX_8_19710001	chrX_19710001	RAL-884
1234	chrX	20940726	20940751	chrX	20942195	20942219	hobo	8	1467	4.0	2.5	3.2	1.9	1493	chrX	20940726	intergenic	not near genes	chrX	20941472	intergenic	not near genes	chrX	20942219	intergenic	not near genes	chrX_8_20940001	chrX_20940001	RAL-884
1240	chrX	21474408	21474435	chrX	21474773	21474779	1731	9	363	3.5	2.0	2.8	2.4	371	chrX	21474408	intergenic	not near genes	chrX	21474594	intergenic	not near genes	chrX	21474779	intergenic	not near genes	chrX_9_21470001	chrX_21470001	RAL-884
1246	chrX	22771520	22771535	chrX	22774796	22774821	297	4	3286	3.5	3.0	3.2	1.0	3301	chrX	22771520	intron	CR44997 +	chrX	22773170	intron	CR44997 +	chrX	22774821	intron	CR44997 +	chrX_4_22770001	chrX_22770001	RAL-884
1247	chrX	22967509	22967512	chrX	23154686	23154689	diver	4	187177	2.5	3.5	3.0	1.0	187180	chrX	22967509	intergenic	not near genes	chrX	23061099	intergenic	not near genes	chrX	23154689	intergenic	not near genes	chrX_4_23060001	chrX_23060001	RAL-884
1248	chrX	22996323	22996337	chrX	23003555	23003569	roo	4	7232	3.0	1.5	2.2	1.2	7246	chrX	22996323	intron,intron	stnA -,stnB -	chrX	22999946	intron,intron	stnA -,stnB -	chrX	23003569	intron,intron	stnA -,stnB -	chrX_4_22995001	chrX_22995001	RAL-884