SV#	Chr_5p	Chr_coord_5p_start	Chr_coord_5p_end	Chr_3p	Chr_coord_3p_start	Chr_coord_3p_end	repName	Reads_collapsed	avg_del_len	RefGen_3prime	Refgen_5prime	RefGen_Avg	Coverage_Ratio	size	Chr_5p	Chr_coord_5p	classification_5p	comment_5p	Chr_mid	Chr_coord_mid	classification_mid	comment_mid	Chr_3p	Chr_coord_3p	classification_3p	comment_3p	depletion_code	loci_code	libname
1	chr2L	47460	47489	chr2L	52565	52592	jockey	11	5101	8.5	5.5	7.0	1.4	5132	chr2L	47460	intron	Cda5 -	chr2L	50026	intron	Cda5 -	chr2L	52592	intron	Cda5 -	chr2L_11_50001	chr2L_50001	RAL-882
3	chr2L	347890	347913	chr2L	355390	355413	blood	7	7499	4.0	1.0	2.5	2.0	7523	chr2L	347890	3` UTR	Plc21C +	chr2L	351652	intron	Plc21C +	chr2L	355413	3` UTR	Plc21C +	chr2L_7_350001	chr2L_350001	RAL-882
9	chr2L	686922	686948	chr2L	695962	695988	roo	8	9037	4.5	2.5	3.5	1.8	9066	chr2L	686922	intron	ds -	chr2L	691455	intron	ds -	chr2L	695988	intron	ds -	chr2L_8_690001	chr2L_690001	RAL-882
12	chr2L	770469	770490	chr2L	772244	772259	Bari1	9	1777	3.0	1.5	2.2	2.8	1790	chr2L	770469	intergenic	not near genes	chr2L	771364	intergenic	not near genes	chr2L	772259	intergenic	CR44614 +	chr2L_9_770001	chr2L_770001	RAL-882
16	chr2L	976878	976906	chr2L	984514	984542	roo	8	7636	4.5	0.5	2.5	2.3	7664	chr2L	976878	intergenic	not near genes	chr2L	980710	intergenic	not near genes	chr2L	984542	intergenic	not near genes	chr2L_8_980001	chr2L_980001	RAL-882
22	chr2L	1220127	1220154	chr2L	1227593	1227620	blood	11	7466	4.5	0.0	2.2	3.4	7493	chr2L	1220127	intron	CG42329 +	chr2L	1223874	intron	CG42329 +	chr2L	1227620	intron	CG42329 +	chr2L_11_1220001	chr2L_1220001	RAL-882
29	chr2L	1570695	1570719	chr2L	1573567	1573591	F-element	11	2872	7.0	5.0	6.0	1.6	2896	chr2L	1570695	intron	haf +	chr2L	1572143	intron	haf +	chr2L	1573591	intron	haf +	chr2L_11_1570001	chr2L_1570001	RAL-882
34	chr2L	1678980	1679009	chr2L	1686442	1686474	blood	7	7464	1.5	2.0	1.8	2.5	7494	chr2L	1678980	intron	chinmo +	chr2L	1682727	intron	chinmo +	chr2L	1686474	intron	chinmo +	chr2L_7_1680001	chr2L_1680001	RAL-882
35	chr2L	1711355	1711388	chr2L	1711679	1711712	mdg3	9	319	2.0	5.0	3.5	2.0	357	chr2L	1711355	3` UTR,3` UTR	mRpL48 +,frtz -	chr2L	1711534	3` UTR	frtz -	chr2L	1711712	3` UTR	frtz -	chr2L_9_1710001	chr2L_1710001	RAL-882
43	chr2L	2100382	2100402	chr2L	2109527	2109553	roo	10	9149	9.5	3.0	6.2	1.4	9171	chr2L	2100382	intron	dpr3 -	chr2L	2104968	intron	dpr3 -	chr2L	2109553	intron	dpr3 -	chr2L_10_2100001	chr2L_2100001	RAL-882
49	chr2L	2661224	2661230	chr2L	2663040	2663041	I-element	4	1821	2.0	2.0	2.0	1.3	1817	chr2L	2661224	intergenic	not near genes	chr2L	2662132	intergenic	not near genes	chr2L	2663041	intergenic	not near genes	chr2L_4_2660001	chr2L_2660001	RAL-882
63	chr2L	3073031	3073060	chr2L	3078234	3078263	copia	12	5203	4.5	2.0	3.2	2.9	5232	chr2L	3073031	intron	toc -	chr2L	3075647	intron	toc -	chr2L	3078263	intron	toc -	chr2L_12_3075001	chr2L_3075001	RAL-882
69	chr2L	3251505	3251522	chr2L	3259070	3259087	springer	4	7565	2.5	6.0	4.2	0.8	7582	chr2L	3251505	intergenic	not near genes	chr2L	3255296	intergenic	not near genes	chr2L	3259087	intergenic	not near genes	chr2L_4_3255001	chr2L_3255001	RAL-882
79	chr2L	3649788	3649805	chr2L	3654990	3655007	copia	4	5202	0.0	6.0	3.0	1.0	5219	chr2L	3649788	intron	for -	chr2L	3652398	intron	for -	chr2L	3655007	intron	for -	chr2L_4_3650001	chr2L_3650001	RAL-882
89	chr2L	4066045	4066058	chr2L	4068870	4068883	Juan	6	2825	4.5	2.5	3.5	1.3	2838	chr2L	4066045	intron	ed +	chr2L	4067464	intron	ed +	chr2L	4068883	intron	ed +	chr2L_6_4065001	chr2L_4065001	RAL-882
93	chr2L	4181293	4181303	chr2L	4183925	4183934	Burdock	6	2632	3.5	0.0	1.8	2.1	2641	chr2L	4181293	intergenic	not near genes	chr2L	4182614	intergenic	not near genes	chr2L	4183934	intergenic	not near genes	chr2L_6_4180001	chr2L_4180001	RAL-882
96	chr2L	4601702	4601737	chr2L	4609143	4609176	mdg1	13	7440	5.5	3.5	4.5	2.4	7474	chr2L	4601702	intron	dp -	chr2L	4605439	intron	dp -	chr2L	4609176	intron	dp -	chr2L_13_4605001	chr2L_4605001	RAL-882
112	chr2L	5827716	5827739	chr2L	5836724	5836746	roo	6	9006	5.0	6.5	5.8	0.9	9030	chr2L	5827716	intron	TrissinR +	chr2L	5832231	intron	TrissinR +	chr2L	5836746	intron	TrissinR +	chr2L_6_5830001	chr2L_5830001	RAL-882
120	chr2L	6363149	6363167	chr2L	6366071	6366089	Burdock	7	2918	4.0	1.5	2.8	1.8	2940	chr2L	6363149	intergenic	not near genes	chr2L	6364619	intergenic	not near genes	chr2L	6366089	intergenic	not near genes	chr2L_7_6360001	chr2L_6360001	RAL-882
121	chr2L	6363168	6363175	chr2L	6366070	6366097	Burdock	4	2906	4.0	1.5	2.8	1.1	2929	chr2L	6363168	intergenic	not near genes	chr2L	6364632	intergenic	not near genes	chr2L	6366097	intergenic	not near genes	chr2L_4_6360001	chr2L_6360001	RAL-882
122	chr2L	6426855	6426888	chr2L	6445115	6445148	roo	14	18260	5.5	7.5	6.5	1.9	18293	chr2L	6426855	3` UTR	CG9527 -	chr2L	6436002	intron	CG9527 -	chr2L	6445148	exon	CG9527 -	chr2L_14_6435001	chr2L_6435001	RAL-882
127	chr2L	6876783	6876810	chr2L	6882965	6882992	diver	4	6186	3.5	3.0	3.2	1.0	6209	chr2L	6876783	intron	Nlg2 +	chr2L	6879888	intron	Nlg2 +	chr2L	6882992	intron	Nlg2 +	chr2L_4_6875001	chr2L_6875001	RAL-882
137	chr2L	7579208	7579213	chr2L	7579399	7579402	BS	4	190	4.5	0.0	2.2	1.2	194	chr2L	7579208	intergenic	RapGAP1 -	chr2L	7579305	intergenic	RapGAP1 -	chr2L	7579402	intergenic	RapGAP1 -	chr2L_4_7575001	chr2L_7575001	RAL-882
142	chr2L	7959049	7959063	chr2L	7960460	7960474	pogo	8	1411	4.5	0.5	2.5	2.3	1425	chr2L	7959049	intron	Snoo -	chr2L	7959762	intron	Snoo -	chr2L	7960474	intron	Snoo -	chr2L_8_7955001	chr2L_7955001	RAL-882
143	chr2L	7977095	7977112	chr2L	7984070	7984081	297	6	6974	2.5	2.0	2.2	1.9	6986	chr2L	7977095	intron	Snoo -	chr2L	7980588	intron	Snoo -	chr2L	7984081	intron,5` UTR	Snoo -,CG7231 +	chr2L_6_7980001	chr2L_7980001	RAL-882
144	chr2L	8013614	8013635	chr2L	8018818	8018829	copia	5	5202	3.5	0.0	1.8	1.8	5215	chr2L	8013614	intron	Tg +	chr2L	8016222	intron	Tg +	chr2L	8018829	intron	Tg +	chr2L_5_8015001	chr2L_8015001	RAL-882
145	chr2L	8018823	8018833	chr2L	8023607	8023617	Doc	5	4784	0.0	1.5	0.8	2.8	4794	chr2L	8018823	intron	Tg +	chr2L	8021220	intron	Tg +	chr2L	8023617	intron	Tg +	chr2L_5_8020001	chr2L_8020001	RAL-882
155	chr2L	8723119	8723147	chr2L	8731496	8731524	Tirant	11	8375	6.0	3.5	4.8	1.9	8405	chr2L	8723119	intron	raw -	chr2L	8727322	intron	raw -	chr2L	8731524	intron	raw -	chr2L_11_8725001	chr2L_8725001	RAL-882
163	chr2L	9217970	9218000	chr2L	9222756	9222784	Doc	4	4786	2.0	0.0	1.0	2.0	4814	chr2L	9217970	intron	tai +	chr2L	9220377	intron	tai +	chr2L	9222784	intron	tai +	chr2L_4_9220001	chr2L_9220001	RAL-882
172	chr2L	9393500	9393531	chr2L	9396467	9396498	jockey	15	2965	3.5	7.5	5.5	2.3	2998	chr2L	9393500	intron	Shawl -	chr2L	9394999	intron	Shawl -	chr2L	9396498	intron	Shawl -	chr2L_15_9390001	chr2L_9390001	RAL-882
185	chr2L	9973729	9973758	chr2L	9980847	9980877	HMS-Beagle	14	7116	4.0	3.5	3.8	2.9	7148	chr2L	9973729	intergenic	not near genes	chr2L	9977303	intergenic	not near genes	chr2L	9980877	intergenic	not near genes	chr2L_14_9975001	chr2L_9975001	RAL-882
191	chr2L	10156329	10156342	chr2L	10163799	10163812	blood	5	7470	5.5	4.0	4.8	0.9	7483	chr2L	10156329	intron,3` UTR	CG44153 -,CG4839 +	chr2L	10160070	intron	CG44153 -	chr2L	10163812	intron	CG44153 -	chr2L_5_10160001	chr2L_10160001	RAL-882
201	chr2L	10862841	10862875	chr2L	10864453	10864479	Rt1c	9	1611	1.0	3.0	2.0	3.0	1638	chr2L	10862841	3` UTR	CR43807 -	chr2L	10863660	intron	CR43807 -	chr2L	10864479	3` UTR	CR43807 -	chr2L_9_10860001	chr2L_10860001	RAL-882
203	chr2L	10946944	10946976	chr2L	10956159	10956191	roo	7	9213	4.5	5.0	4.8	1.2	9247	chr2L	10946944	intron	dpr2 -	chr2L	10951568	intron	dpr2 -	chr2L	10956191	intron	dpr2 -	chr2L_7_10950001	chr2L_10950001	RAL-882
209	chr2L	11540586	11540608	chr2L	11547988	11548010	Tabor	7	7402	0.5	4.0	2.2	2.2	7424	chr2L	11540586	intergenic	not near genes	chr2L	11544298	intergenic	not near genes	chr2L	11548010	intergenic	not near genes	chr2L_7_11540001	chr2L_11540001	RAL-882
210	chr2L	11563637	11563667	chr2L	11568841	11568871	copia	11	5203	3.0	1.5	2.2	3.4	5234	chr2L	11563637	intergenic	not near genes	chr2L	11566254	intergenic	not near genes	chr2L	11568871	intergenic	not near genes	chr2L_11_11565001	chr2L_11565001	RAL-882
213	chr2L	11614069	11614086	chr2L	11615545	11615581	hopper2	6	1485	3.0	3.0	3.0	1.5	1512	chr2L	11614069	intron	kek2 +	chr2L	11614825	intron	kek2 +	chr2L	11615581	intron	kek2 +	chr2L_6_11610001	chr2L_11610001	RAL-882
217	chr2L	11713507	11713539	chr2L	11720975	11721000	blood	12	7466	1.5	4.5	3.0	3.0	7493	chr2L	11713507	intergenic	not near genes	chr2L	11717254	intergenic	not near genes	chr2L	11721000	intergenic	CR44143 +	chr2L_12_11715001	chr2L_11715001	RAL-882
225	chr2L	12067334	12067361	chr2L	12074385	12074413	297	8	7052	0.0	4.5	2.2	2.5	7079	chr2L	12067334	intergenic	not near genes	chr2L	12070874	intergenic	not near genes	chr2L	12074413	intergenic	not near genes	chr2L_8_12070001	chr2L_12070001	RAL-882
235	chr2L	12558320	12558353	chr2L	12565449	12565482	HMS-Beagle	9	7129	1.5	1.5	1.5	3.6	7162	chr2L	12558320	intergenic	not near genes	chr2L	12561901	intergenic	not near genes	chr2L	12565482	intergenic	not near genes	chr2L_9_12560001	chr2L_12560001	RAL-882
238	chr2L	12728922	12728944	chr2L	12729161	12729184	pogo	8	238	3.5	3.0	3.2	1.9	262	chr2L	12728922	intron	MRP +	chr2L	12729053	intron	MRP +	chr2L	12729184	exon	MRP +	chr2L_8_12725001	chr2L_12725001	RAL-882
239	chr2L	12739173	12739206	chr2L	12743954	12743987	Doc	9	4781	1.0	6.0	3.5	2.0	4814	chr2L	12739173	exon	MRP +	chr2L	12741580	intron	MRP +	chr2L	12743987	exon	MRP +	chr2L_9_12740001	chr2L_12740001	RAL-882
242	chr2L	12861694	12861718	chr2L	12863161	12863182	hobo	11	1466	7.0	4.0	5.5	1.7	1488	chr2L	12861694	intergenic	not near genes	chr2L	12862438	intergenic	not near genes	chr2L	12863182	intergenic	not near genes	chr2L_11_12860001	chr2L_12860001	RAL-882
244	chr2L	12933849	12933883	chr2L	12941315	12941350	blood	14	7466	2.5	1.5	2.0	4.7	7501	chr2L	12933849	intergenic	not near genes	chr2L	12937600	intergenic	not near genes	chr2L	12941350	intergenic	not near genes	chr2L_14_12935001	chr2L_12935001	RAL-882
249	chr2L	13405651	13405680	chr2L	13410448	13410477	Doc	14	4796	1.5	4.0	2.8	3.7	4826	chr2L	13405651	exon	CG7110 +	chr2L	13408064	intron	CG7110 +	chr2L	13410477	intron	CG7110 +	chr2L_14_13405001	chr2L_13405001	RAL-882
251	chr2L	13481447	13481475	chr2L	13482054	13482082	jockey	4	607	4.5	7.5	6.0	0.6	635	chr2L	13481447	intron	CG42784 +	chr2L	13481764	intron	CG42784 +	chr2L	13482082	intron	CG42784 +	chr2L_4_13480001	chr2L_13480001	RAL-882
255	chr2L	13761809	13761835	chr2L	13762920	13762945	Doc	7	1110	5.0	5.5	5.2	1.1	1136	chr2L	13761809	intron	TM9SF4 +	chr2L	13762377	intron	TM9SF4 +	chr2L	13762945	intron	TM9SF4 +	chr2L_7_13760001	chr2L_13760001	RAL-882
257	chr2L	13853090	13853118	chr2L	13862233	13862268	roo	9	9149	2.5	2.5	2.5	2.6	9178	chr2L	13853090	intron	CenG1A +	chr2L	13857679	intron	CenG1A +	chr2L	13862268	intron	CenG1A +	chr2L_9_13855001	chr2L_13855001	RAL-882
269	chr2L	14803879	14803913	chr2L	14809081	14809115	copia	10	5202	2.5	5.0	3.8	2.1	5236	chr2L	14803879	intergenic	not near genes	chr2L	14806497	intergenic	not near genes	chr2L	14809115	intergenic	not near genes	chr2L_10_14805001	chr2L_14805001	RAL-882
271	chr2L	14889956	14889988	chr2L	14890381	14890413	jockey	16	424	4.5	3.5	4.0	3.2	457	chr2L	14889956	intergenic	not near genes	chr2L	14890184	intergenic	not near genes	chr2L	14890413	intergenic	not near genes	chr2L_16_14890001	chr2L_14890001	RAL-882
273	chr2L	14984386	14984398	chr2L	14991988	14992000	opus	4	7602	4.0	3.0	3.5	0.9	7614	chr2L	14984386	intron	mol -	chr2L	14988193	intron	mol -	chr2L	14992000	intron	mol -	chr2L_4_14985001	chr2L_14985001	RAL-882
284	chr2L	15446054	15446084	chr2L	15453523	15453553	blood	9	7469	2.0	1.5	1.8	3.2	7499	chr2L	15446054	intergenic	not near genes	chr2L	15449804	intergenic	not near genes	chr2L	15453553	intergenic	not near genes	chr2L_9_15445001	chr2L_15445001	RAL-882
289	chr2L	15586409	15586430	chr2L	15593461	15593482	297	7	7052	4.5	1.5	3.0	1.8	7073	chr2L	15586409	intergenic	not near genes	chr2L	15589946	intergenic	not near genes	chr2L	15593482	intergenic	not near genes	chr2L_7_15585001	chr2L_15585001	RAL-882
292	chr2L	15956022	15956060	chr2L	15957489	15957491	hobo	12	1463	3.0	0.5	1.8	4.3	1469	chr2L	15956022	intron	beat-Ib -	chr2L	15956756	intron	beat-Ib -	chr2L	15957491	intron	beat-Ib -	chr2L_12_15955001	chr2L_15955001	RAL-882
296	chr2L	16071771	16071771	chr2L	16217660	16217660	copia	16	145889	17.5	24.0	20.8	0.7	145889	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217660	intergenic	not near genes	chr2L_16_16140001	chr2L_16140001	RAL-882
301	chr2L	16071771	16071771	chr2L	16217660	16217660	copia	9	145889	17.5	24.0	20.8	0.4	145889	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217660	intergenic	not near genes	chr2L_9_16140001	chr2L_16140001	RAL-882
302	chr2L	16280258	16280284	chr2L	16281429	16281454	1360	6	1170	2.5	3.0	2.8	1.6	1196	chr2L	16280258	intron	crp -	chr2L	16280856	intron	crp -	chr2L	16281454	intron	crp -	chr2L_6_16280001	chr2L_16280001	RAL-882
304	chr2L	16511968	16511994	chr2L	16519082	16519108	HMS-Beagle	6	7114	0.5	2.0	1.2	2.7	7140	chr2L	16511968	intron	CG5953 -	chr2L	16515538	intron	CG5953 -	chr2L	16519108	intron	CG5953 -	chr2L_6_16515001	chr2L_16515001	RAL-882
314	chr2L	16958123	16958136	chr2L	16962911	16962924	Doc	4	4788	2.0	5.5	3.8	0.8	4801	chr2L	16958123	intergenic	not near genes	chr2L	16960524	intergenic	not near genes	chr2L	16962924	intergenic	not near genes	chr2L_4_16960001	chr2L_16960001	RAL-882
321	chr2L	17167566	17167579	chr2L	17167806	17167820	pogo	4	241	3.0	2.5	2.8	1.1	254	chr2L	17167566	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167693	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167820	intron,intron	CG34106 +,beat-IIIa +	chr2L_4_17165001	chr2L_17165001	RAL-882
322	chr2L	17199174	17199193	chr2L	17200641	17200660	hobo	5	1467	0.0	4.5	2.2	1.6	1486	chr2L	17199174	intron	beat-IIIc -	chr2L	17199917	intron	beat-IIIc -	chr2L	17200660	intron	beat-IIIc -	chr2L_5_17195001	chr2L_17195001	RAL-882
323	chr2L	17273188	17273229	chr2L	17277971	17277987	F-element	20	4781	5.0	4.0	4.5	3.6	4799	chr2L	17273188	intergenic	not near genes	chr2L	17275588	intergenic	not near genes	chr2L	17277987	intergenic	not near genes	chr2L_20_17275001	chr2L_17275001	RAL-882
327	chr2L	17432021	17432049	chr2L	17432128	17432155	1360	6	107	0.0	0.0	0.0	6.0	134	chr2L	17432021	intron	Dif -	chr2L	17432088	intron	Dif -	chr2L	17432155	intron	Dif -	chr2L_6_17430001	chr2L_17430001	RAL-882
330	chr2L	17727760	17727786	chr2L	17729449	17729475	hobo	7	1689	1.0	2.5	1.8	2.5	1715	chr2L	17727760	intron	CadN -	chr2L	17728618	intron	CadN -	chr2L	17729475	intron	CadN -	chr2L_7_17725001	chr2L_17725001	RAL-882
332	chr2L	17819925	17819939	chr2L	17825126	17825141	copia	5	5202	1.5	4.0	2.8	1.3	5216	chr2L	17819925	intron	CadN2 -	chr2L	17822533	intron	CadN2 -	chr2L	17825141	intron	CadN2 -	chr2L_5_17820001	chr2L_17820001	RAL-882
334	chr2L	17911967	17911979	chr2L	17914142	17914157	pogo	5	2177	6.5	2.5	4.5	0.9	2190	chr2L	17911967	intergenic	not near genes	chr2L	17913062	intergenic	not near genes	chr2L	17914157	intergenic	CG43271 -	chr2L_5_17910001	chr2L_17910001	RAL-882
336	chr2L	17951943	17951980	chr2L	17953410	17953447	hobo	9	1467	1.5	4.0	2.8	2.4	1504	chr2L	17951943	intergenic	CR44398 -,CR44397 -	chr2L	17952695	intergenic	not near genes	chr2L	17953447	intergenic	not near genes	chr2L_9_17950001	chr2L_17950001	RAL-882
339	chr2L	18051879	18051909	chr2L	18061026	18061056	roo	9	9146	3.5	1.5	2.5	2.6	9177	chr2L	18051879	intron	rdo +	chr2L	18056468	intron	rdo +	chr2L	18061056	intron	rdo +	chr2L_9_18055001	chr2L_18055001	RAL-882
344	chr2L	18408026	18408043	chr2L	18412810	18412827	Doc	8	4784	6.5	0.0	3.2	1.9	4801	chr2L	18408026	intergenic	not near genes	chr2L	18410426	intergenic	not near genes	chr2L	18412827	intergenic	not near genes	chr2L_8_18410001	chr2L_18410001	RAL-882
345	chr2L	18408045	18408052	chr2L	18412806	18412836	Doc	6	4780	5.0	0.0	2.5	1.7	4791	chr2L	18408045	intergenic	not near genes	chr2L	18410440	intergenic	not near genes	chr2L	18412836	intergenic	not near genes	chr2L_6_18410001	chr2L_18410001	RAL-882
354	chr2L	19147385	19147399	chr2L	19154420	19154434	297	5	7035	0.0	5.0	2.5	1.4	7049	chr2L	19147385	intron	brat +	chr2L	19150910	intron	brat +	chr2L	19154434	intron	brat +	chr2L_5_19150001	chr2L_19150001	RAL-882
360	chr2L	19345016	19345028	chr2L	19357222	19357232	blood	8	12207	7.0	3.5	5.2	1.3	12216	chr2L	19345016	intron	dnt -	chr2L	19351124	intron	dnt -	chr2L	19357232	intron	dnt -	chr2L_8_19350001	chr2L_19350001	RAL-882
361	chr2L	19345029	19345040	chr2L	19357220	19357249	blood	6	12206	5.0	3.0	4.0	1.2	12220	chr2L	19345029	intron	dnt -	chr2L	19351139	intron	dnt -	chr2L	19357249	intron	dnt -	chr2L_6_19350001	chr2L_19350001	RAL-882
371	chr2L	19620095	19620132	chr2L	19621083	19621109	jockey	8	985	1.5	5.0	3.2	1.9	1014	chr2L	19620095	intron	Lar +	chr2L	19620602	intron	Lar +	chr2L	19621109	intron	Lar +	chr2L_8_19620001	chr2L_19620001	RAL-882
373	chr2L	19652570	19652603	chr2L	19674006	19674039	opus	10	21436	2.5	2.5	2.5	2.9	21469	chr2L	19652570	intron	Lar +	chr2L	19663304	intron	Lar +	chr2L	19674039	intron	Lar +	chr2L_10_19660001	chr2L_19660001	RAL-882
374	chr2L	19703536	19703564	chr2L	19712672	19712699	roo	6	9136	5.0	4.0	4.5	1.1	9163	chr2L	19703536	intron	Lar +	chr2L	19708118	intron	Lar +	chr2L	19712699	intron	Lar +	chr2L_6_19705001	chr2L_19705001	RAL-882
376	chr2L	19737360	19737364	chr2L	19740828	19740833	1360	5	3469	3.5	3.0	3.2	1.2	3473	chr2L	19737360	intergenic	Nf-YB +	chr2L	19739096	intergenic	not near genes	chr2L	19740833	intergenic	not near genes	chr2L_5_19735001	chr2L_19735001	RAL-882
377	chr2L	19737368	19737389	chr2L	19740822	19740848	1360	11	3462	2.0	1.5	1.8	3.9	3480	chr2L	19737368	intergenic	Nf-YB +	chr2L	19739108	intergenic	not near genes	chr2L	19740848	intergenic	not near genes	chr2L_11_19735001	chr2L_19735001	RAL-882
383	chr2L	20005876	20005900	chr2L	20010950	20010976	flea	6	5075	0.5	3.5	2.0	2.0	5100	chr2L	20005876	intron	CG43861 -	chr2L	20008426	intron	CG43861 -	chr2L	20010976	intron	CG43861 -	chr2L_6_20005001	chr2L_20005001	RAL-882
388	chr2L	20272113	20272145	chr2L	20282823	20282856	copia	4	10711	5.0	3.5	4.2	0.8	10743	chr2L	20272113	intergenic	not near genes	chr2L	20277484	intergenic	not near genes	chr2L	20282856	intergenic	not near genes	chr2L_4_20275001	chr2L_20275001	RAL-882
391	chr2L	20303160	20303187	chr2L	20310628	20310655	blood	5	7468	0.5	1.5	1.0	2.5	7495	chr2L	20303160	intergenic	not near genes	chr2L	20306908	intergenic	not near genes	chr2L	20310655	intergenic	not near genes	chr2L_5_20305001	chr2L_20305001	RAL-882
396	chr2L	20568662	20568679	chr2L	20569052	20569069	X-element	5	390	3.0	3.5	3.2	1.2	407	chr2L	20568662	intron	CR45347 +	chr2L	20568866	intron	CR45347 +	chr2L	20569069	intron	CR45347 +	chr2L_5_20565001	chr2L_20565001	RAL-882
403	chr2L	20835807	20835833	chr2L	20836524	20836550	Quasimodo	6	717	0.5	1.0	0.8	3.3	743	chr2L	20835807	5` UTR	Oseg5 -	chr2L	20836178	intergenic	Oseg5 -,Spn38F -	chr2L	20836550	intergenic	Spn38F -	chr2L_6_20835001	chr2L_20835001	RAL-882
404	chr2L	20901474	20901488	chr2L	20902619	20902630	1360	5	1146	1.0	4.5	2.8	1.3	1156	chr2L	20901474	intron,intron	CG43739 -,sky -	chr2L	20902052	intron,intron	CG43739 -,sky -	chr2L	20902630	intron,intron	CG43739 -,sky -	chr2L_5_20900001	chr2L_20900001	RAL-882
407	chr2L	20976643	20976679	chr2L	20981458	20981494	X-element	10	4815	0.5	2.0	1.2	4.5	4851	chr2L	20976643	intron	CG42238 -	chr2L	20979068	intron	CG42238 -	chr2L	20981494	intron	CG42238 -	chr2L_10_20975001	chr2L_20975001	RAL-882
409	chr2L	21020277	21020309	chr2L	21023952	21023984	NOF	11	3676	1.0	4.5	2.8	2.9	3707	chr2L	21020277	intron	CG42238 -	chr2L	21022130	intron	CG42238 -	chr2L	21023984	intron	CG42238 -	chr2L_11_21020001	chr2L_21020001	RAL-882
410	chr2L	21041134	21041165	chr2L	21049395	21049419	Tirant	7	8260	2.0	1.5	1.8	2.5	8285	chr2L	21041134	intron	CG42238 -	chr2L	21045276	intron	CG42238 -	chr2L	21049419	intron	CG42238 -	chr2L_7_21045001	chr2L_21045001	RAL-882
417	chr2L	21597027	21597047	chr2L	21604771	21604788	roo	4	7743	3.5	1.0	2.2	1.2	7761	chr2L	21597027	intergenic	not near genes	chr2L	21600908	intergenic	not near genes	chr2L	21604788	intergenic	not near genes	chr2L_4_21600001	chr2L_21600001	RAL-882
423	chr2L	21981682	21981710	chr2L	21990847	21990875	roo	8	9165	3.0	5.5	4.2	1.5	9193	chr2L	21981682	exon	CG2528 -	chr2L	21986278	intron	CG2528 -	chr2L	21990875	exon	CG2528 -	chr2L_8_21985001	chr2L_21985001	RAL-882
427	chr2L	22258618	22258644	chr2L	22260742	22260768	G6	8	2124	3.5	2.0	2.8	2.1	2150	chr2L	22258618	intergenic	Tif-IA +	chr2L	22259693	intergenic	not near genes	chr2L	22260768	intergenic	not near genes	chr2L_8_22255001	chr2L_22255001	RAL-882
430	chr2L	22446021	22446027	chr2L	22506893	22506900	HMS-Beagle	6	60872	16.0	24.0	20.0	0.3	60879	chr2L	22446021	intergenic	not near genes	chr2L	22476460	intergenic	not near genes	chr2L	22506900	intergenic	not near genes	chr2L_6_22475001	chr2L_22475001	RAL-882
432	chr2L	22548927	22548940	chr2L	22550152	22550161	1360	10	1224	0.5	5.0	2.8	2.6	1234	chr2L	22548927	intergenic	CG17490 +	chr2L	22549544	intergenic	not near genes	chr2L	22550161	intergenic	CG17493 +	chr2L_10_22545001	chr2L_22545001	RAL-882
433	chr2L	22581984	22582002	chr2L	22583773	22583791	S-element	4	1789	1.5	3.5	2.5	1.1	1807	chr2L	22581984	intron	CG17494 +	chr2L	22582888	intron	CG17494 +	chr2L	22583791	intron	CG17494 +	chr2L_4_22580001	chr2L_22580001	RAL-882
434	chr2L	22679805	22679831	chr2L	22684577	22684602	F-element	10	4770	2.0	8.5	5.2	1.6	4797	chr2L	22679805	intron	CG40006 -	chr2L	22682204	intron	CG40006 -	chr2L	22684602	intron	CG40006 -	chr2L_10_22680001	chr2L_22680001	RAL-882
437	chr2L	23007006	23007020	chr2L	23007096	23007109	Osvaldo	6	90	6.5	2.0	4.2	1.2	103	chr2L	23007006	intron	Cht3 -	chr2L	23007058	intron	Cht3 -	chr2L	23007109	intron	Cht3 -	chr2L_6_23005001	chr2L_23005001	RAL-882
438	chr2R	529328	529357	chr2R	537946	537982	Max-element	8	8624	1.0	4.0	2.5	2.3	8654	chr2R	529328	intron	CG40378 +	chr2R	533655	intron	CG40378 +	chr2R	537982	intron	CG40378 +	chr2R_8_530001	chr2R_530001	RAL-882
439	chr2R	552772	552788	chr2R	553980	554005	1360	6	1212	2.5	2.5	2.5	1.7	1233	chr2R	552772	intron	CG40378 +	chr2R	553388	intron	CG40378 +	chr2R	554005	intron	CG40378 +	chr2R_6_550001	chr2R_550001	RAL-882
445	chr2R	2498985	2499016	chr2R	2508132	2508163	roo	8	9147	2.5	3.0	2.8	2.1	9178	chr2R	2498985	intron	MFS17 -	chr2R	2503574	intron	MFS17 -	chr2R	2508163	intron	MFS17 -	chr2R_8_2500001	chr2R_2500001	RAL-882
446	chr2R	2591549	2591565	chr2R	2594218	2594235	roo	4	2673	20.0	15.0	17.5	0.2	2686	chr2R	2591549	intergenic	not near genes	chr2R	2592892	intergenic	not near genes	chr2R	2594235	intergenic	not near genes	chr2R_4_2590001	chr2R_2590001	RAL-882
447	chr2R	3144091	3144108	chr2R	3393369	3393385	Doc	7	249277	9.0	18.5	13.8	0.5	249294	chr2R	3144091	intron	CG42596 +	chr2R	3268738	intergenic	not near genes	chr2R	3393385	intergenic	not near genes	chr2R_7_3265001	chr2R_3265001	RAL-882
454	chr2R	4622952	4622987	chr2R	4624110	4624145	1360	13	1156	3.5	4.5	4.0	2.6	1193	chr2R	4622952	intergenic	CR44101 -	chr2R	4623548	intergenic	not near genes	chr2R	4624145	intergenic	not near genes	chr2R_13_4620001	chr2R_4620001	RAL-882
456	chr2R	4750353	4750377	chr2R	4751510	4751533	1360	7	1156	0.5	6.0	3.2	1.7	1180	chr2R	4750353	intron	conu +	chr2R	4750943	intron	conu +	chr2R	4751533	intron	conu +	chr2R_7_4750001	chr2R_4750001	RAL-882
469	chr2R	5543198	5543220	chr2R	5547282	5547303	invader1	6	4084	0.0	2.0	1.0	3.0	4105	chr2R	5543198	intron	CG30438 +	chr2R	5545250	intron	CG30438 +	chr2R	5547303	intron	CG30438 +	chr2R_6_5545001	chr2R_5545001	RAL-882
481	chr2R	6096716	6096750	chr2R	6101910	6101937	BS	6	5186	6.0	2.0	4.0	1.2	5221	chr2R	6096716	intron	EcR -	chr2R	6099326	intron	EcR -	chr2R	6101937	intron	EcR -	chr2R_6_6095001	chr2R_6095001	RAL-882
489	chr2R	6579800	6579805	chr2R	6584887	6584891	flea	4	5087	0.5	2.0	1.2	1.8	5091	chr2R	6579800	intron	jing +	chr2R	6582346	intron	jing +	chr2R	6584891	intron	jing +	chr2R_4_6580001	chr2R_6580001	RAL-882
498	chr2R	7196567	7196594	chr2R	7201341	7201368	F-element	5	4775	2.5	1.0	1.8	1.8	4801	chr2R	7196567	intron	pk +	chr2R	7198968	intron	pk +	chr2R	7201368	intron	pk +	chr2R_5_7195001	chr2R_7195001	RAL-882
500	chr2R	7235832	7235846	chr2R	7240910	7240924	jockey	6	5086	4.0	6.0	5.0	1.0	5092	chr2R	7235832	intergenic	not near genes	chr2R	7238378	intergenic	not near genes	chr2R	7240924	intergenic	not near genes	chr2R_6_7235001	chr2R_7235001	RAL-882
504	chr2R	7434896	7434914	chr2R	7439196	7439216	Juan	4	4301	0.5	4.5	2.5	1.1	4320	chr2R	7434896	intergenic	so +	chr2R	7437056	intergenic	not near genes	chr2R	7439216	intergenic	not near genes	chr2R_4_7435001	chr2R_7435001	RAL-882
507	chr2R	7608409	7608432	chr2R	7613612	7613635	I-element	6	5203	1.0	0.0	0.5	4.0	5226	chr2R	7608409	intron	CG1358 -	chr2R	7611022	intron	CG1358 -	chr2R	7613635	intron	CG1358 -	chr2R_6_7610001	chr2R_7610001	RAL-882
511	chr2R	7815671	7815699	chr2R	7822139	7822168	Burdock	9	6468	2.5	5.0	3.8	1.9	6497	chr2R	7815671	intergenic	CG1882 +	chr2R	7818920	intergenic	not near genes	chr2R	7822168	3` UTR	cathD -	chr2R_9_7815001	chr2R_7815001	RAL-882
512	chr2R	7869192	7869202	chr2R	7873978	7873988	Doc	6	4785	5.5	4.5	5.0	1.0	4796	chr2R	7869192	intron	Dgk -	chr2R	7871590	intron	Dgk -	chr2R	7873988	intron	Dgk -	chr2R_6_7870001	chr2R_7870001	RAL-882
513	chr2R	7869209	7869216	chr2R	7873973	7873999	Doc	5	4777	2.0	4.5	3.2	1.2	4790	chr2R	7869209	intron	Dgk -	chr2R	7871604	intron	Dgk -	chr2R	7873999	intron	Dgk -	chr2R_5_7870001	chr2R_7870001	RAL-882
516	chr2R	8160948	8160953	chr2R	8161029	8161043	1360	7	88	3.0	11.5	7.2	0.9	95	chr2R	8160948	intron	CG8708 -	chr2R	8160996	intron	CG8708 -	chr2R	8161043	intron	CG8708 -	chr2R_7_8160001	chr2R_8160001	RAL-882
519	chr2R	8330863	8330887	chr2R	8331348	8331373	roo	7	485	3.5	3.0	3.2	1.7	510	chr2R	8330863	intron	pdm3 +	chr2R	8331118	intron	pdm3 +	chr2R	8331373	intron	pdm3 +	chr2R_7_8330001	chr2R_8330001	RAL-882
520	chr2R	8398225	8398235	chr2R	8402991	8403016	Doc	5	4773	5.0	3.5	4.2	1.0	4791	chr2R	8398225	intron	CG2121 -	chr2R	8400620	intron	CG2121 -	chr2R	8403016	intron	CG2121 -	chr2R_5_8400001	chr2R_8400001	RAL-882
524	chr2R	8722772	8722789	chr2R	8723003	8723015	pogo	11	234	5.5	2.5	4.0	2.2	243	chr2R	8722772	intron	CG14767 -	chr2R	8722894	intron	CG14767 -	chr2R	8723015	intron	CG14767 -	chr2R_11_8720001	chr2R_8720001	RAL-882
530	chr2R	9151304	9151334	chr2R	9157774	9157804	Burdock	7	6470	1.0	1.5	1.2	3.2	6500	chr2R	9151304	3` UTR	CG30345 +	chr2R	9154554	intergenic	not near genes	chr2R	9157804	intergenic	CG8008 -	chr2R_7_9150001	chr2R_9150001	RAL-882
534	chr2R	9212705	9212724	chr2R	9213177	9213209	roo	6	479	5.5	5.0	5.2	1.0	504	chr2R	9212705	intergenic	CR45309 +	chr2R	9212957	intergenic	CR45309 +	chr2R	9213209	5` UTR	CR45309 +	chr2R_6_9210001	chr2R_9210001	RAL-882
537	chr2R	9480075	9480104	chr2R	9490606	9490635	roo	5	10531	1.0	0.5	0.8	2.8	10560	chr2R	9480075	intergenic	not near genes	chr2R	9485355	intergenic	not near genes	chr2R	9490635	intergenic	not near genes	chr2R_5_9485001	chr2R_9485001	RAL-882
544	chr2R	9945434	9945468	chr2R	9945630	9945649	BS	7	192	6.5	2.0	4.2	1.3	215	chr2R	9945434	intron	Mef2 -	chr2R	9945542	intron	Mef2 -	chr2R	9945649	intron	Mef2 -	chr2R_7_9945001	chr2R_9945001	RAL-882
547	chr2R	10005847	10005881	chr2R	10007012	10007039	1360	7	1162	4.0	5.5	4.8	1.2	1192	chr2R	10005847	intron	Pka-R2 -	chr2R	10006443	intron	Pka-R2 -	chr2R	10007039	intron	Pka-R2 -	chr2R_7_10005001	chr2R_10005001	RAL-882
552	chr2R	10176891	10176911	chr2R	10186058	10186078	roo	4	9167	2.0	1.0	1.5	1.6	9187	chr2R	10176891	intron	KCNQ -	chr2R	10181484	intron	KCNQ -	chr2R	10186078	intron	KCNQ -	chr2R_4_10180001	chr2R_10180001	RAL-882
569	chr2R	10585575	10585589	chr2R	10594157	10594172	Tirant	6	8582	3.0	2.5	2.8	1.6	8597	chr2R	10585575	intron	psq +	chr2R	10589874	intron	psq +	chr2R	10594172	intron	psq +	chr2R_6_10585001	chr2R_10585001	RAL-882
578	chr2R	10948031	10948047	chr2R	10955582	10955598	17.6	5	7549	1.5	4.0	2.8	1.3	7567	chr2R	10948031	intergenic	not near genes	chr2R	10951814	intergenic	not near genes	chr2R	10955598	intergenic	not near genes	chr2R_5_10950001	chr2R_10950001	RAL-882
579	chr2R	10948048	10948060	chr2R	10955576	10955610	17.6	8	7546	1.5	2.5	2.0	2.7	7562	chr2R	10948048	intergenic	not near genes	chr2R	10951829	intergenic	not near genes	chr2R	10955610	intergenic	not near genes	chr2R_8_10950001	chr2R_10950001	RAL-882
583	chr2R	11009815	11009848	chr2R	11018989	11019022	roo	15	9170	2.5	3.0	2.8	3.9	9207	chr2R	11009815	intron	luna -	chr2R	11014418	intron	luna -	chr2R	11019022	intron	luna -	chr2R_15_11010001	chr2R_11010001	RAL-882
585	chr2R	11207823	11207846	chr2R	11208006	11208010	BS	5	184	3.0	1.0	2.0	1.7	187	chr2R	11207823	intron	shn +	chr2R	11207916	intron	shn +	chr2R	11208010	intron	shn +	chr2R_5_11205001	chr2R_11205001	RAL-882
587	chr2R	11472647	11472680	chr2R	11473844	11473877	pogo	16	1196	5.0	4.0	4.5	2.9	1230	chr2R	11472647	intergenic	not near genes	chr2R	11473262	intergenic	not near genes	chr2R	11473877	intergenic	not near genes	chr2R_16_11470001	chr2R_11470001	RAL-882
595	chr2R	12501696	12501724	chr2R	12503853	12503886	Rt1c	5	2159	1.0	4.0	2.5	1.4	2190	chr2R	12501696	intron	fdl -	chr2R	12502791	intron	fdl -	chr2R	12503886	intron	fdl -	chr2R_5_12500001	chr2R_12500001	RAL-882
601	chr2R	12789294	12789322	chr2R	12797656	12797685	roo	4	8362	4.5	1.5	3.0	1.0	8391	chr2R	12789294	intron,3` UTR	sca +,CR45137 -	chr2R	12793490	intron,intron	sca +,CR45137 -	chr2R	12797685	intron,3` UTR	sca +,CR45137 -	chr2R_4_12790001	chr2R_12790001	RAL-882
604	chr2R	13136838	13136842	chr2R	13141636	13141640	Doc	4	4798	8.0	6.0	7.0	0.5	4802	chr2R	13136838	exon	Cap-G +	chr2R	13139239	intron	Cap-G +	chr2R	13141640	intron	Cap-G +	chr2R_4_13135001	chr2R_13135001	RAL-882
605	chr2R	13136843	13136869	chr2R	13141635	13141666	Doc	13	4796	4.0	6.0	5.0	2.2	4823	chr2R	13136843	exon	Cap-G +	chr2R	13139254	intron	Cap-G +	chr2R	13141666	intron	Cap-G +	chr2R_13_13135001	chr2R_13135001	RAL-882
616	chr2R	13580505	13580530	chr2R	13580847	13580880	jockey	6	344	0.0	2.0	1.0	3.0	375	chr2R	13580505	3` UTR	CG6191 -	chr2R	13580692	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R	13580880	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R_6_13580001	chr2R_13580001	RAL-882
622	chr2R	13905614	13905635	chr2R	13907589	13907614	Rt1a	5	1976	2.0	4.0	3.0	1.2	2000	chr2R	13905614	intron	shot -	chr2R	13906614	intron	shot -	chr2R	13907614	intron	shot -	chr2R_5_13905001	chr2R_13905001	RAL-882
630	chr2R	14394230	14394243	chr2R	14399018	14399032	Doc	4	4787	4.0	1.5	2.8	1.1	4802	chr2R	14394230	intergenic	not near genes	chr2R	14396631	intergenic	not near genes	chr2R	14399032	intergenic	not near genes	chr2R_4_14395001	chr2R_14395001	RAL-882
632	chr2R	14467297	14467302	chr2R	14476447	14476454	roo	4	9151	0.5	7.0	3.8	0.8	9157	chr2R	14467297	intergenic	not near genes	chr2R	14471876	intergenic	not near genes	chr2R	14476454	5` UTR	CR44462 +	chr2R_4_14470001	chr2R_14470001	RAL-882
633	chr2R	14467310	14467327	chr2R	14476443	14476476	roo	5	9147	0.5	6.5	3.5	1.1	9166	chr2R	14467310	intergenic	not near genes	chr2R	14471893	intergenic	not near genes	chr2R	14476476	5` UTR	CR44462 +	chr2R_5_14470001	chr2R_14470001	RAL-882
642	chr2R	14889216	14889235	chr2R	14897824	14897836	Max-element	7	8607	3.0	0.0	1.5	2.8	8620	chr2R	14889216	intergenic	Cyp6a8 -	chr2R	14893526	intergenic	not near genes	chr2R	14897836	intergenic	not near genes	chr2R_7_14890001	chr2R_14890001	RAL-882
646	chr2R	15004737	15004755	chr2R	15005054	15005062	jockey	7	324	4.0	2.5	3.2	1.7	325	chr2R	15004737	intergenic	not near genes	chr2R	15004900	intergenic	not near genes	chr2R	15005062	intergenic	not near genes	chr2R_7_15000001	chr2R_15000001	RAL-882
647	chr2R	15015466	15015489	chr2R	15022887	15022913	mdg1	8	7423	2.5	6.5	4.5	1.5	7447	chr2R	15015466	intron	hbs +	chr2R	15019190	intron	hbs +	chr2R	15022913	intron	hbs +	chr2R_8_15015001	chr2R_15015001	RAL-882
650	chr2R	15084981	15084998	chr2R	15092030	15092047	297	6	7049	4.0	2.5	3.2	1.4	7066	chr2R	15084981	intergenic	not near genes	chr2R	15088514	intergenic	not near genes	chr2R	15092047	5` UTR	CR44457 +	chr2R_6_15085001	chr2R_15085001	RAL-882
651	chr2R	15119317	15119342	chr2R	15127798	15127823	Tirant	10	8481	4.0	7.0	5.5	1.5	8506	chr2R	15119317	intron	chn +	chr2R	15123570	intron	chn +	chr2R	15127823	intron	chn +	chr2R_10_15120001	chr2R_15120001	RAL-882
662	chr2R	16539641	16539654	chr2R	16544850	16544863	copia	4	5209	0.5	0.0	0.2	3.3	5222	chr2R	16539641	intergenic	not near genes	chr2R	16542252	intergenic	not near genes	chr2R	16544863	intergenic	not near genes	chr2R_4_16540001	chr2R_16540001	RAL-882
672	chr2R	17147239	17147270	chr2R	17152270	17152301	jockey	7	5031	5.0	6.5	5.8	1.0	5062	chr2R	17147239	intergenic	not near genes	chr2R	17149770	intergenic	not near genes	chr2R	17152301	intergenic	not near genes	chr2R_7_17145001	chr2R_17145001	RAL-882
673	chr2R	17236509	17236539	chr2R	17241713	17241743	copia	13	5204	3.0	4.0	3.5	2.9	5234	chr2R	17236509	intron	mbl +	chr2R	17239126	intron	mbl +	chr2R	17241743	intron	mbl +	chr2R_13_17235001	chr2R_17235001	RAL-882
676	chr2R	17485922	17485928	chr2R	17490692	17490698	F-element	4	4770	3.0	1.5	2.2	1.2	4776	chr2R	17485922	5` UTR,intron	CG43110 -,NT5E-2 +	chr2R	17488310	intron	NT5E-2 +	chr2R	17490698	intron	NT5E-2 +	chr2R_4_17485001	chr2R_17485001	RAL-882
680	chr2R	17784027	17784055	chr2R	17784266	17784296	pogo	15	239	0.5	4.0	2.2	4.7	269	chr2R	17784027	intergenic	mir-31a -	chr2R	17784162	intergenic	mir-31a -	chr2R	17784296	intergenic	mir-31a -	chr2R_15_17780001	chr2R_17780001	RAL-882
687	chr2R	18358387	18358422	chr2R	18372599	18372634	roo	17	14212	3.5	2.0	2.8	4.5	14247	chr2R	18358387	intergenic	not near genes	chr2R	18365510	intergenic	not near genes	chr2R	18372634	intergenic	not near genes	chr2R_17_18365001	chr2R_18365001	RAL-882
691	chr2R	18575814	18575830	chr2R	18581986	18582018	3S18	6	6182	3.0	4.0	3.5	1.3	6204	chr2R	18575814	intron	GEFmeso -	chr2R	18578916	intron	GEFmeso -	chr2R	18582018	intron	GEFmeso -	chr2R_6_18575001	chr2R_18575001	RAL-882
692	chr2R	18590866	18590891	chr2R	18600018	18600028	roo	6	9149	3.0	3.5	3.2	1.4	9162	chr2R	18590866	intron	GEFmeso -	chr2R	18595447	intron	GEFmeso -	chr2R	18600028	intron	GEFmeso -	chr2R_6_18595001	chr2R_18595001	RAL-882
708	chr2R	19776601	19776614	chr2R	19779924	19779936	jockey	5	3321	6.5	4.5	5.5	0.8	3335	chr2R	19776601	intergenic	not near genes	chr2R	19778268	intergenic	not near genes	chr2R	19779936	intergenic	not near genes	chr2R_5_19775001	chr2R_19775001	RAL-882
710	chr2R	19914844	19914867	chr2R	19922255	19922279	mdg1	6	7412	5.5	2.0	3.8	1.2	7435	chr2R	19914844	intergenic	not near genes	chr2R	19918562	intergenic	not near genes	chr2R	19922279	intergenic	not near genes	chr2R_6_19915001	chr2R_19915001	RAL-882
712	chr2R	19957430	19957453	chr2R	19962632	19962652	copia	6	5200	5.0	3.5	4.2	1.2	5222	chr2R	19957430	intergenic	CG44623 +	chr2R	19960041	intergenic	not near genes	chr2R	19962652	intergenic	not near genes	chr2R_6_19960001	chr2R_19960001	RAL-882
721	chr2R	20739447	20739479	chr2R	20744215	20744232	F-element	10	4764	1.5	4.0	2.8	2.6	4785	chr2R	20739447	intron	dpr +	chr2R	20741840	intron	dpr +	chr2R	20744232	intron	dpr +	chr2R_10_20740001	chr2R_20740001	RAL-882
722	chr2R	20783320	20783328	chr2R	20788092	20788092	F-element	5	4770	1.0	3.0	2.0	1.7	4772	chr2R	20783320	intergenic	not near genes	chr2R	20785706	intergenic	not near genes	chr2R	20788092	intergenic	CG43666 -	chr2R_5_20785001	chr2R_20785001	RAL-882
731	chr2R	21151117	21151138	chr2R	21153750	21153770	opus	6	2632	5.5	0.5	3.0	1.5	2653	chr2R	21151117	intron	CG30389 -	chr2R	21152444	intron	CG30389 -	chr2R	21153770	intron	CG30389 -	chr2R_6_21150001	chr2R_21150001	RAL-882
738	chr2R	21738279	21738307	chr2R	21747435	21747447	roo	4	9148	1.5	2.0	1.8	1.4	9168	chr2R	21738279	intergenic	not near genes	chr2R	21742863	intergenic	not near genes	chr2R	21747447	intergenic	not near genes	chr2R_4_21740001	chr2R_21740001	RAL-882
739	chr2R	21753102	21753117	chr2R	21753567	21753602	roo	6	479	4.0	2.5	3.2	1.4	500	chr2R	21753102	intergenic	not near genes	chr2R	21753352	intergenic	not near genes	chr2R	21753602	intergenic	not near genes	chr2R_6_21750001	chr2R_21750001	RAL-882
748	chr2R	22349690	22349706	chr2R	22351474	22351490	jockey	5	1784	5.5	1.5	3.5	1.1	1800	chr2R	22349690	intron	Liprin-gamma -	chr2R	22350590	intron	Liprin-gamma -	chr2R	22351490	intron	Liprin-gamma -	chr2R_5_22350001	chr2R_22350001	RAL-882
749	chr2R	22360382	22360396	chr2R	22360813	22360829	jockey	4	432	6.0	3.0	4.5	0.7	447	chr2R	22360382	intron	Liprin-gamma -	chr2R	22360606	intron	Liprin-gamma -	chr2R	22360829	intron	Liprin-gamma -	chr2R_4_22360001	chr2R_22360001	RAL-882
753	chr2R	22525745	22525783	chr2R	22529300	22529338	jockey	13	3555	2.5	4.5	3.5	2.9	3593	chr2R	22525745	intron	px -	chr2R	22527542	intron	px -	chr2R	22529338	intron	px -	chr2R_13_22525001	chr2R_22525001	RAL-882
755	chr2R	22580438	22580445	chr2R	22586581	22586589	diver	4	6144	0.5	2.0	1.2	1.8	6151	chr2R	22580438	intron	dnr1 -	chr2R	22583514	intron	dnr1 -	chr2R	22586589	intron	dnr1 -	chr2R_4_22580001	chr2R_22580001	RAL-882
779	chr2R	23914301	23914332	chr2R	23921923	23921934	412	16	7620	2.0	2.0	2.0	5.3	7633	chr2R	23914301	exon	kcc +	chr2R	23918118	intron	kcc +	chr2R	23921934	intron	kcc +	chr2R_16_23915001	chr2R_23915001	RAL-882
784	chr2R	24147082	24147098	chr2R	24154650	24154676	412	4	7575	4.5	4.0	4.2	0.8	7594	chr2R	24147082	intron	Dat +	chr2R	24150879	intron	Dat +	chr2R	24154676	intron	Dat +	chr2R_4_24150001	chr2R_24150001	RAL-882
786	chr2R	24177239	24177256	chr2R	24184720	24184740	412	9	7484	7.0	2.5	4.8	1.6	7501	chr2R	24177239	3` UTR	Nop60B +	chr2R	24180990	intron	Nop60B +	chr2R	24184740	3` UTR	Nop60B +	chr2R_9_24180001	chr2R_24180001	RAL-882
788	chr2R	24353429	24353451	chr2R	24361791	24361813	roo	9	8361	4.0	2.5	3.2	2.1	8384	chr2R	24353429	intron,intron	bs +,CR44811 -	chr2R	24357621	intron,intron	bs +,CR44811 -	chr2R	24361813	intron,intron	bs +,CR44811 -	chr2R_9_24355001	chr2R_24355001	RAL-882
794	chr2R	24647587	24647616	chr2R	24655144	24655173	412	11	7556	6.5	3.5	5.0	1.8	7586	chr2R	24647587	intergenic	not near genes	chr2R	24651380	intergenic	not near genes	chr2R	24655173	intergenic	not near genes	chr2R_11_24650001	chr2R_24650001	RAL-882
796	chr2R	24727900	24727916	chr2R	24735403	24735424	mdg1	6	7506	2.5	6.5	4.5	1.1	7524	chr2R	24727900	intron	Mid1 -	chr2R	24731662	intron	Mid1 -	chr2R	24735424	intron	Mid1 -	chr2R_6_24730001	chr2R_24730001	RAL-882
798	chr2R	24763611	24763644	chr2R	24765587	24765620	G2	12	1974	4.5	6.0	5.2	1.9	2009	chr2R	24763611	exon	CG3894 +	chr2R	24764616	intron	CG3894 +	chr2R	24765620	exon	CG3894 +	chr2R_12_24760001	chr2R_24760001	RAL-882
811	chr3L	110213	110245	chr3L	119380	119411	roo	9	9166	5.0	5.0	5.0	1.5	9198	chr3L	110213	intergenic	not near genes	chr3L	114812	intergenic	not near genes	chr3L	119411	intergenic	not near genes	chr3L_9_110001	chr3L_110001	RAL-882
815	chr3L	402687	402716	chr3L	409740	409769	297	7	7053	4.5	4.0	4.2	1.3	7082	chr3L	402687	intergenic	not near genes	chr3L	406228	intergenic	not near genes	chr3L	409769	intergenic	not near genes	chr3L_7_405001	chr3L_405001	RAL-882
823	chr3L	789912	789947	chr3L	790397	790432	roo	10	485	1.5	2.5	2.0	3.3	520	chr3L	789912	intergenic	not near genes	chr3L	790172	intergenic	not near genes	chr3L	790432	intergenic	not near genes	chr3L_10_790001	chr3L_790001	RAL-882
824	chr3L	857998	858032	chr3L	866478	866497	Tirant	9	8471	2.0	3.5	2.8	2.4	8499	chr3L	857998	intergenic	not near genes	chr3L	862248	intergenic	not near genes	chr3L	866497	intergenic	CG12502 +	chr3L_9_860001	chr3L_860001	RAL-882
825	chr3L	925175	925206	chr3L	932601	932632	mdg1	16	7426	5.0	3.0	4.0	3.2	7457	chr3L	925175	intron	Glut1 +	chr3L	928904	intron	Glut1 +	chr3L	932632	intron	Glut1 +	chr3L_16_925001	chr3L_925001	RAL-882
827	chr3L	939771	939801	chr3L	940892	940922	jockey	12	1120	5.0	5.0	5.0	2.0	1151	chr3L	939771	intron	Glut1 +	chr3L	940346	intron	Glut1 +	chr3L	940922	intron	Glut1 +	chr3L_12_940001	chr3L_940001	RAL-882
834	chr3L	1154130	1154163	chr3L	1163280	1163312	roo	8	9150	2.0	3.0	2.5	2.3	9182	chr3L	1154130	intron	bab2 -	chr3L	1158721	intron	bab2 -	chr3L	1163312	intron	bab2 -	chr3L_8_1155001	chr3L_1155001	RAL-882
836	chr3L	1219594	1219609	chr3L	1227327	1227339	412	6	7732	5.0	4.5	4.8	1.0	7745	chr3L	1219594	intron	mwh +	chr3L	1223466	intron	mwh +	chr3L	1227339	intron	mwh +	chr3L_6_1220001	chr3L_1220001	RAL-882
844	chr3L	1506000	1506031	chr3L	1513597	1513628	17.6	7	7597	3.5	3.0	3.2	1.7	7628	chr3L	1506000	intron,intron	Psa +,cue -	chr3L	1509814	intron,intron	Psa +,cue -	chr3L	1513628	intron,intron	Psa +,cue -	chr3L_7_1505001	chr3L_1505001	RAL-882
852	chr3L	2447514	2447526	chr3L	2456670	2456673	roo	5	9154	5.5	5.0	5.2	0.8	9159	chr3L	2447514	intron	CG45186 +	chr3L	2452094	intron	CG45186 +	chr3L	2456673	intron	CG45186 +	chr3L_5_2450001	chr3L_2450001	RAL-882
853	chr3L	2447528	2447534	chr3L	2456659	2456690	roo	4	9146	3.5	3.0	3.2	1.0	9162	chr3L	2447528	intron	CG45186 +	chr3L	2452109	intron	CG45186 +	chr3L	2456690	intron	CG45186 +	chr3L_4_2450001	chr3L_2450001	RAL-882
862	chr3L	2927837	2927870	chr3L	2936114	2936147	Tirant	13	8276	4.0	1.0	2.5	3.7	8310	chr3L	2927837	intron	Shab +	chr3L	2931992	intron	Shab +	chr3L	2936147	intron	Shab +	chr3L_13_2930001	chr3L_2930001	RAL-882
865	chr3L	3040327	3040331	chr3L	3042116	3042118	S-element	4	1788	6.0	1.0	3.5	0.9	1791	chr3L	3040327	3` UTR	CG2162 +	chr3L	3041222	intergenic	not near genes	chr3L	3042118	intergenic	Jafrac2 +	chr3L_4_3040001	chr3L_3040001	RAL-882
866	chr3L	3051751	3051756	chr3L	3051992	3051998	pogo	4	242	3.0	3.5	3.2	1.0	247	chr3L	3051751	3` UTR	CG32485 +	chr3L	3051874	intergenic	CG32485 +	chr3L	3051998	intergenic	CG32485 +	chr3L_4_3050001	chr3L_3050001	RAL-882
869	chr3L	3281439	3281443	chr3L	3281935	3281939	Doc	4	496	9.0	8.5	8.8	0.4	500	chr3L	3281439	intron	CG12017 +	chr3L	3281689	intron	CG12017 +	chr3L	3281939	intron	CG12017 +	chr3L_4_3280001	chr3L_3280001	RAL-882
870	chr3L	3281446	3281477	chr3L	3281933	3281957	Doc	19	492	1.5	8.0	4.8	3.3	511	chr3L	3281446	intron	CG12017 +	chr3L	3281702	intron	CG12017 +	chr3L	3281957	intron	CG12017 +	chr3L_19_3280001	chr3L_3280001	RAL-882
872	chr3L	3475073	3475108	chr3L	3475517	3475552	jockey	15	444	1.0	3.5	2.2	4.7	479	chr3L	3475073	intron	CG42324 +	chr3L	3475312	intron	CG42324 +	chr3L	3475552	intron	CG42324 +	chr3L_15_3475001	chr3L_3475001	RAL-882
877	chr3L	3601303	3601332	chr3L	3606614	3606643	copia	15	5310	5.0	5.5	5.2	2.4	5340	chr3L	3601303	intron	Eip63E +	chr3L	3603973	intron	Eip63E +	chr3L	3606643	intron	Eip63E +	chr3L_15_3600001	chr3L_3600001	RAL-882
891	chr3L	4901129	4901152	chr3L	4907319	4907342	diver	6	6190	5.0	2.5	3.8	1.2	6213	chr3L	4901129	intergenic	CG13704 +	chr3L	4904236	intergenic	not near genes	chr3L	4907342	intergenic	not near genes	chr3L_6_4900001	chr3L_4900001	RAL-882
892	chr3L	5045457	5045486	chr3L	5050238	5050267	Doc	4	4781	2.5	4.0	3.2	1.0	4810	chr3L	5045457	intron	Con -	chr3L	5047862	intron	Con -	chr3L	5050267	intron	Con -	chr3L_4_5045001	chr3L_5045001	RAL-882
903	chr3L	5910032	5910058	chr3L	5910273	5910297	pogo	6	241	2.5	3.0	2.8	1.6	265	chr3L	5910032	intron	CG13288 +	chr3L	5910164	intron	CG13288 +	chr3L	5910297	intron	CG13288 +	chr3L_6_5910001	chr3L_5910001	RAL-882
904	chr3L	5926314	5926351	chr3L	5926504	5926541	BS	13	182	4.0	2.5	3.2	3.1	227	chr3L	5926314	intron	Vap-33B +	chr3L	5926428	intron	Vap-33B +	chr3L	5926541	intron	Vap-33B +	chr3L_13_5925001	chr3L_5925001	RAL-882
905	chr3L	6001683	6001713	chr3L	6004379	6004413	jockey	7	2699	3.5	0.5	2.0	2.3	2730	chr3L	6001683	intron	PVRAP +	chr3L	6003048	intron	PVRAP +	chr3L	6004413	intron	PVRAP +	chr3L_7_6000001	chr3L_6000001	RAL-882
907	chr3L	6040371	6040389	chr3L	6042722	6042744	Doc	5	2355	4.0	3.5	3.8	1.0	2373	chr3L	6040371	intergenic	Jon65Aiv +	chr3L	6041558	intergenic	not near genes	chr3L	6042744	intergenic	not near genes	chr3L_5_6040001	chr3L_6040001	RAL-882
910	chr3L	6220915	6220948	chr3L	6230067	6230100	roo	11	9152	4.0	8.5	6.2	1.5	9185	chr3L	6220915	5` UTR	pncr008:3L +	chr3L	6225508	intergenic	not near genes	chr3L	6230100	intergenic	not near genes	chr3L_11_6225001	chr3L_6225001	RAL-882
913	chr3L	6335009	6335028	chr3L	6335479	6335499	297	5	470	7.0	5.5	6.2	0.7	490	chr3L	6335009	intron	CG13300 -	chr3L	6335254	intron	CG13300 -	chr3L	6335499	intron	CG13300 -	chr3L_5_6335001	chr3L_6335001	RAL-882
916	chr3L	6405656	6405688	chr3L	6432120	6432152	roo	4	26464	1.0	2.5	1.8	1.4	26496	chr3L	6405656	intron	CG42747 +	chr3L	6418904	intron	CG42747 +	chr3L	6432152	intron	CG42747 +	chr3L_4_6415001	chr3L_6415001	RAL-882
925	chr3L	6855934	6855954	chr3L	6860717	6860738	Doc	7	4781	1.0	1.5	1.2	3.2	4804	chr3L	6855934	intergenic	not near genes	chr3L	6858336	intergenic	not near genes	chr3L	6860738	intergenic	not near genes	chr3L_7_6855001	chr3L_6855001	RAL-882
926	chr3L	6887516	6887551	chr3L	6895008	6895043	roo	10	7490	4.0	4.0	4.0	2.0	7527	chr3L	6887516	intergenic	not near genes	chr3L	6891280	intergenic	not near genes	chr3L	6895043	intergenic	not near genes	chr3L_10_6890001	chr3L_6890001	RAL-882
933	chr3L	7377315	7377349	chr3L	7380420	7380454	297	9	3104	2.0	1.0	1.5	3.6	3139	chr3L	7377315	intron	SMSr -	chr3L	7378884	intron	SMSr -	chr3L	7380454	intron	SMSr -	chr3L_9_7375001	chr3L_7375001	RAL-882
938	chr3L	7793711	7793744	chr3L	7800763	7800796	297	9	7051	3.5	2.0	2.8	2.4	7085	chr3L	7793711	intron	CG32369 -	chr3L	7797254	intron	CG32369 -	chr3L	7800796	intron	CG32369 -	chr3L_9_7795001	chr3L_7795001	RAL-882
939	chr3L	7886519	7886547	chr3L	7889037	7889065	Stalker4	10	2518	1.5	3.5	2.5	2.9	2546	chr3L	7886519	intron	CG32365 +	chr3L	7887792	intron	CG32365 +	chr3L	7889065	intron	CG32365 +	chr3L_10_7885001	chr3L_7885001	RAL-882
941	chr3L	7916831	7916855	chr3L	7926002	7926026	roo	4	9171	0.5	0.5	0.5	2.7	9195	chr3L	7916831	3` UTR	syd -	chr3L	7921428	intron	syd -	chr3L	7926026	3` UTR	syd -	chr3L_4_7920001	chr3L_7920001	RAL-882
942	chr3L	7985367	7985397	chr3L	7987690	7987725	NOF	11	2327	2.0	5.0	3.5	2.4	2358	chr3L	7985367	intron	nmo +	chr3L	7986546	intron	nmo +	chr3L	7987725	intron	nmo +	chr3L_11_7985001	chr3L_7985001	RAL-882
952	chr3L	8791284	8791300	chr3L	8796703	8796720	I-element	5	5420	7.0	8.5	7.8	0.6	5436	chr3L	8791284	exon	Fhos +	chr3L	8794002	intron	Fhos +	chr3L	8796720	intron	Fhos +	chr3L_5_8790001	chr3L_8790001	RAL-882
956	chr3L	9076925	9076959	chr3L	9084485	9084519	412	18	7559	5.0	3.5	4.2	3.5	7594	chr3L	9076925	exon	Tequila +	chr3L	9080722	intron	Tequila +	chr3L	9084519	exon	Tequila +	chr3L_18_9080001	chr3L_9080001	RAL-882
958	chr3L	9130562	9130581	chr3L	9134323	9134342	412	7	3761	6.0	6.5	6.2	1.0	3780	chr3L	9130562	intergenic	bol -	chr3L	9132452	intergenic	not near genes	chr3L	9134342	intergenic	Dhpr +	chr3L_7_9130001	chr3L_9130001	RAL-882
959	chr3L	9164696	9164731	chr3L	9166162	9166198	hobo	5	1467	3.0	0.5	1.8	1.8	1502	chr3L	9164696	intron	Rdl -	chr3L	9165447	intron	Rdl -	chr3L	9166198	intron	Rdl -	chr3L_5_9165001	chr3L_9165001	RAL-882
960	chr3L	9270615	9270647	chr3L	9278370	9278402	roo	4	7754	3.0	0.5	1.8	1.4	7787	chr3L	9270615	intron	GluRIB +	chr3L	9274508	intron	GluRIB +	chr3L	9278402	exon	GluRIB +	chr3L_4_9270001	chr3L_9270001	RAL-882
963	chr3L	9443510	9443539	chr3L	9445301	9445330	S-element	7	1789	0.5	3.5	2.0	2.3	1820	chr3L	9443510	intron	CG33926 +	chr3L	9444420	intron	CG33926 +	chr3L	9445330	intron	CG33926 +	chr3L_7_9440001	chr3L_9440001	RAL-882
964	chr3L	9501708	9501726	chr3L	9502191	9502212	roo	5	485	3.5	4.0	3.8	1.0	504	chr3L	9501708	intron	path -	chr3L	9501960	intron	path -	chr3L	9502212	intron	path -	chr3L_5_9500001	chr3L_9500001	RAL-882
966	chr3L	9575906	9575933	chr3L	9580984	9581009	jockey	5	5077	7.0	3.0	5.0	0.8	5103	chr3L	9575906	intron	CG42673 +	chr3L	9578458	intron	CG42673 +	chr3L	9581009	intron	CG42673 +	chr3L_5_9575001	chr3L_9575001	RAL-882
971	chr3L	9929677	9929693	chr3L	9938457	9938473	roo	4	8780	4.5	7.5	6.0	0.6	8796	chr3L	9929677	intron	CG34356 +	chr3L	9934075	intron	CG34356 +	chr3L	9938473	intron	CG34356 +	chr3L_4_9930001	chr3L_9930001	RAL-882
979	chr3L	10414957	10414977	chr3L	10417325	10417328	Doc	4	2366	0.5	3.5	2.0	1.3	2371	chr3L	10414957	intergenic	CG12362 +	chr3L	10416142	intergenic	not near genes	chr3L	10417328	intergenic	not near genes	chr3L_4_10415001	chr3L_10415001	RAL-882
991	chr3L	11087057	11087086	chr3L	11088846	11088872	S-element	10	1789	0.5	2.0	1.2	4.5	1815	chr3L	11087057	intron	JIL-1 -	chr3L	11087964	intron	JIL-1 -	chr3L	11088872	intron	JIL-1 -	chr3L_10_11085001	chr3L_11085001	RAL-882
992	chr3L	11105295	11105329	chr3L	11107006	11107040	X-element	4	1710	0.5	2.5	1.5	1.6	1745	chr3L	11105295	intergenic	not near genes	chr3L	11106168	intergenic	not near genes	chr3L	11107040	exon	CG32073 -	chr3L_4_11105001	chr3L_11105001	RAL-882
995	chr3L	11264466	11264499	chr3L	11271418	11271450	17.6	8	6950	2.5	3.5	3.0	2.0	6984	chr3L	11264466	intergenic	not near genes	chr3L	11267958	intergenic	not near genes	chr3L	11271450	intergenic	not near genes	chr3L_8_11265001	chr3L_11265001	RAL-882
1001	chr3L	11564793	11564803	chr3L	11572417	11572427	412	4	7623	5.0	5.0	5.0	0.7	7634	chr3L	11564793	exon	CG33267 +	chr3L	11568610	intron	CG33267 +	chr3L	11572427	exon	CG33267 +	chr3L_4_11565001	chr3L_11565001	RAL-882
1005	chr3L	11723085	11723111	chr3L	11727880	11727906	Doc	7	4795	3.0	1.0	2.0	2.3	4821	chr3L	11723085	3` UTR	Bmcp +	chr3L	11725496	intron	Bmcp +	chr3L	11727906	3` UTR	Bmcp +	chr3L_7_11725001	chr3L_11725001	RAL-882
1029	chr3L	12874935	12874962	chr3L	12877227	12877253	jockey	9	2291	1.5	2.5	2.0	3.0	2318	chr3L	12874935	intergenic	not near genes	chr3L	12876094	intergenic	not near genes	chr3L	12877253	intergenic	not near genes	chr3L_9_12875001	chr3L_12875001	RAL-882
1031	chr3L	12919279	12919306	chr3L	12924750	12924756	Rt1c	9	5470	3.5	2.0	2.8	2.4	5477	chr3L	12919279	intergenic	not near genes	chr3L	12922018	intergenic	not near genes	chr3L	12924756	intergenic	not near genes	chr3L_9_12920001	chr3L_12920001	RAL-882
1032	chr3L	12957794	12957810	chr3L	12962276	12962292	copia	7	4482	2.0	4.5	3.2	1.7	4498	chr3L	12957794	intergenic	not near genes	chr3L	12960043	intergenic	not near genes	chr3L	12962292	intergenic	not near genes	chr3L_7_12960001	chr3L_12960001	RAL-882
1042	chr3L	13525159	13525187	chr3L	13532954	13532959	roo	8	7790	3.0	9.0	6.0	1.1	7800	chr3L	13525159	intergenic	not near genes	chr3L	13529059	intergenic	not near genes	chr3L	13532959	intergenic	not near genes	chr3L_8_13525001	chr3L_13525001	RAL-882
1051	chr3L	13804549	13804569	chr3L	13822834	13822855	roo	4	18286	1.5	2.0	1.8	1.4	18306	chr3L	13804549	intergenic	not near genes	chr3L	13813702	intergenic	not near genes	chr3L	13822855	intergenic	not near genes	chr3L_4_13810001	chr3L_13810001	RAL-882
1054	chr3L	14245565	14245589	chr3L	14245659	14245682	1360	5	94	3.0	1.5	2.2	1.6	117	chr3L	14245565	3` UTR	CR44561 -	chr3L	14245624	3` UTR	CR44561 -	chr3L	14245682	3` UTR	CR44561 -	chr3L_5_14245001	chr3L_14245001	RAL-882
1055	chr3L	14267374	14267391	chr3L	14271814	14271831	F-element	5	4440	5.0	5.0	5.0	0.8	4457	chr3L	14267374	intergenic	not near genes	chr3L	14269602	intergenic	not near genes	chr3L	14271831	intergenic	not near genes	chr3L_5_14265001	chr3L_14265001	RAL-882
1056	chr3L	14267394	14267400	chr3L	14271806	14271817	F-element	5	4424	5.0	5.0	5.0	0.8	4423	chr3L	14267394	intergenic	not near genes	chr3L	14269606	intergenic	not near genes	chr3L	14271817	intergenic	not near genes	chr3L_5_14265001	chr3L_14265001	RAL-882
1057	chr3L	14295995	14296006	chr3L	14296478	14296492	roo	4	485	2.0	2.5	2.2	1.2	497	chr3L	14295995	intron	fz +	chr3L	14296244	intron	fz +	chr3L	14296492	intron	fz +	chr3L_4_14295001	chr3L_14295001	RAL-882
1059	chr3L	14312020	14312058	chr3L	14316834	14316835	X-element	4	4804	2.5	2.0	2.2	1.2	4815	chr3L	14312020	exon	fz +	chr3L	14314428	intron	fz +	chr3L	14316835	intron	fz +	chr3L_4_14310001	chr3L_14310001	RAL-882
1062	chr3L	14468447	14468470	chr3L	14473653	14473673	copia	4	5205	2.0	2.5	2.2	1.2	5226	chr3L	14468447	intron	bbg -	chr3L	14471060	intron	bbg -	chr3L	14473673	intron	bbg -	chr3L_4_14470001	chr3L_14470001	RAL-882
1066	chr3L	14721199	14721208	chr3L	14723028	14723051	Rt1c	4	1835	3.5	3.5	3.5	0.9	1852	chr3L	14721199	intron	ome +	chr3L	14722125	intron	ome +	chr3L	14723051	intron	ome +	chr3L_4_14720001	chr3L_14720001	RAL-882
1067	chr3L	14725594	14725629	chr3L	14728589	14728623	Doc	4	2994	0.0	2.5	1.2	1.8	3029	chr3L	14725594	intron	ome +	chr3L	14727108	intron	ome +	chr3L	14728623	intron	ome +	chr3L_4_14725001	chr3L_14725001	RAL-882
1070	chr3L	15085050	15085079	chr3L	15086216	15086245	1360	5	1166	2.0	3.5	2.8	1.3	1195	chr3L	15085050	intron	cp309 -	chr3L	15085648	intron	cp309 -	chr3L	15086245	intron	cp309 -	chr3L_5_15085001	chr3L_15085001	RAL-882
1076	chr3L	15423762	15423783	chr3L	15426606	15426627	opus	5	2844	3.0	4.5	3.8	1.0	2865	chr3L	15423762	intergenic	not near genes	chr3L	15425194	intergenic	not near genes	chr3L	15426627	intergenic	not near genes	chr3L_5_15425001	chr3L_15425001	RAL-882
1078	chr3L	15554927	15554949	chr3L	15556713	15556736	S-element	6	1787	1.5	2.5	2.0	2.0	1809	chr3L	15554927	intron	AGO2 +	chr3L	15555832	intron	AGO2 +	chr3L	15556736	intron	AGO2 +	chr3L_6_15555001	chr3L_15555001	RAL-882
1084	chr3L	15929202	15929222	chr3L	15938349	15938369	roo	4	9147	3.5	3.0	3.2	1.0	9167	chr3L	15929202	intron	Pka-C3 -	chr3L	15933786	intron	Pka-C3 -	chr3L	15938369	intron	Pka-C3 -	chr3L_4_15930001	chr3L_15930001	RAL-882
1088	chr3L	16184107	16184136	chr3L	16188926	16188949	X-element	8	4818	1.5	4.5	3.0	2.0	4842	chr3L	16184107	intergenic	not near genes	chr3L	16186528	intergenic	not near genes	chr3L	16188949	intergenic	not near genes	chr3L_8_16185001	chr3L_16185001	RAL-882
1091	chr3L	16443851	16443879	chr3L	16446189	16446219	Doc	11	2338	1.5	3.0	2.2	3.4	2368	chr3L	16443851	intron,intron	CG33158 +,dsx-c73A -	chr3L	16445035	intron,intron	CG33158 +,dsx-c73A -	chr3L	16446219	intron,intron	CG33158 +,dsx-c73A -	chr3L_11_16445001	chr3L_16445001	RAL-882
1094	chr3L	16616509	16616539	chr3L	16621837	16621867	297	7	5328	5.0	2.0	3.5	1.6	5358	chr3L	16616509	3` UTR	Abl -	chr3L	16619188	3` UTR	Abl -	chr3L	16621867	3` UTR	Abl -	chr3L_7_16615001	chr3L_16615001	RAL-882
1095	chr3L	16684024	16684031	chr3L	16689245	16689252	copia	4	5221	1.5	3.5	2.5	1.1	5228	chr3L	16684024	intron,intron	Lasp -,CG43954 -	chr3L	16686638	intron,intron	Lasp -,CG43954 -	chr3L	16689252	intron,intron	Lasp -,CG43954 -	chr3L_4_16685001	chr3L_16685001	RAL-882
1099	chr3L	16945726	16945761	chr3L	16954879	16954885	roo	15	9146	2.0	0.5	1.2	6.8	9159	chr3L	16945726	exon	Obp73a +	chr3L	16950306	intergenic	not near genes	chr3L	16954885	5` UTR	Nc73EF +	chr3L_15_16950001	chr3L_16950001	RAL-882
1100	chr3L	17085010	17085034	chr3L	17094159	17094183	roo	8	9149	2.5	5.5	4.0	1.6	9173	chr3L	17085010	intron	Rbp6 -	chr3L	17089596	intron	Rbp6 -	chr3L	17094183	intron	Rbp6 -	chr3L_8_17085001	chr3L_17085001	RAL-882
1107	chr3L	17516978	17517013	chr3L	17524536	17524539	412	12	7554	1.5	2.0	1.8	4.3	7561	chr3L	17516978	intron	CG7564 +	chr3L	17520758	intron	CG7564 +	chr3L	17524539	3` UTR	CG7564 +	chr3L_12_17520001	chr3L_17520001	RAL-882
1108	chr3L	17730858	17730870	chr3L	17738188	17738200	mdg1	4	7330	1.5	2.5	2.0	1.3	7342	chr3L	17730858	intron	Ccn +	chr3L	17734529	intron	Ccn +	chr3L	17738200	intron	Ccn +	chr3L_4_17730001	chr3L_17730001	RAL-882
1110	chr3L	17799812	17799840	chr3L	17801599	17801627	S-element	4	1787	1.0	0.0	0.5	2.7	1815	chr3L	17799812	intron	NUCB1 -	chr3L	17800720	intron	NUCB1 -	chr3L	17801627	intron	NUCB1 -	chr3L_4_17800001	chr3L_17800001	RAL-882
1111	chr3L	17918375	17918403	chr3L	17921178	17921206	opus	6	2803	0.5	3.0	1.8	2.1	2831	chr3L	17918375	intergenic	not near genes	chr3L	17919790	intergenic	not near genes	chr3L	17921206	intergenic	not near genes	chr3L_6_17915001	chr3L_17915001	RAL-882
1116	chr3L	18047709	18047738	chr3L	18056765	18056795	roo	4	9056	0.5	0.0	0.2	3.3	9086	chr3L	18047709	intron	Eip75B -	chr3L	18052252	intron	Eip75B -	chr3L	18056795	intron	Eip75B -	chr3L_4_18050001	chr3L_18050001	RAL-882
1129	chr3L	18593949	18593977	chr3L	18595929	18595957	Doc	4	1980	2.0	0.0	1.0	2.0	2008	chr3L	18593949	intergenic	term -	chr3L	18594953	intergenic	not near genes	chr3L	18595957	intergenic	CR45389 +	chr3L_4_18590001	chr3L_18590001	RAL-882
1135	chr3L	18772406	18772438	chr3L	18781087	18781115	roo	15	8681	4.5	4.0	4.2	2.9	8709	chr3L	18772406	intron	ftz-f1 -	chr3L	18776760	intron	ftz-f1 -	chr3L	18781115	intron	ftz-f1 -	chr3L_15_18775001	chr3L_18775001	RAL-882
1139	chr3L	18833780	18833805	chr3L	18834944	18834965	1360	5	1163	4.0	1.0	2.5	1.4	1185	chr3L	18833780	intron	Indy -	chr3L	18834372	intron	Indy -	chr3L	18834965	intron	Indy -	chr3L_5_18830001	chr3L_18830001	RAL-882
1146	chr3L	19008859	19008873	chr3L	19009175	19009211	jockey	4	332	0.0	3.0	1.5	1.6	352	chr3L	19008859	intron	nkd -	chr3L	19009035	intron	nkd -	chr3L	19009211	intron	nkd -	chr3L_4_19005001	chr3L_19005001	RAL-882
1148	chr3L	19115645	19115678	chr3L	19115823	19115833	BS	6	174	4.5	7.5	6.0	0.9	188	chr3L	19115645	intron	CG14082 -	chr3L	19115739	intron	CG14082 -	chr3L	19115833	intron	CG14082 -	chr3L_6_19115001	chr3L_19115001	RAL-882
1149	chr3L	19117042	19117073	chr3L	19124489	19124520	mdg1	9	7443	6.5	3.5	5.0	1.5	7478	chr3L	19117042	intron	CG14082 -	chr3L	19120781	intron	CG14082 -	chr3L	19124520	intron	CG14082 -	chr3L_9_19120001	chr3L_19120001	RAL-882
1151	chr3L	19208059	19208086	chr3L	19209433	19209457	Doc	6	1373	5.0	3.0	4.0	1.2	1398	chr3L	19208059	intron	fz2 -	chr3L	19208758	intron	fz2 -	chr3L	19209457	intron	fz2 -	chr3L_6_19205001	chr3L_19205001	RAL-882
1158	chr3L	19861822	19861850	chr3L	19863609	19863636	S-element	7	1787	3.5	3.5	3.5	1.6	1814	chr3L	19861822	5` UTR	CR45433 +	chr3L	19862729	intergenic	not near genes	chr3L	19863636	intergenic	not near genes	chr3L_7_19860001	chr3L_19860001	RAL-882
1170	chr3L	20257332	20257357	chr3L	20258452	20258475	pogo	7	1120	1.5	2.5	2.0	2.3	1143	chr3L	20257332	intron	rdgC +	chr3L	20257904	intron	rdgC +	chr3L	20258475	intron	rdgC +	chr3L_7_20255001	chr3L_20255001	RAL-882
1175	chr3L	20476752	20476782	chr3L	20484351	20484381	springer	5	7599	2.5	4.0	3.2	1.2	7629	chr3L	20476752	3` UTR	isoQC +	chr3L	20480566	intergenic	not near genes	chr3L	20484381	3` UTR	ZnT77C -	chr3L_5_20480001	chr3L_20480001	RAL-882
1176	chr3L	20590065	20590083	chr3L	20590604	20590622	412	4	538	1.5	2.0	1.8	1.4	557	chr3L	20590065	intergenic	not near genes	chr3L	20590344	intergenic	not near genes	chr3L	20590622	intergenic	not near genes	chr3L_4_20590001	chr3L_20590001	RAL-882
1184	chr3L	21014915	21014948	chr3L	21023395	21023404	Tirant	7	8474	1.0	2.5	1.8	2.5	8489	chr3L	21014915	intron	skd -	chr3L	21019160	intron	skd -	chr3L	21023404	intron	skd -	chr3L_7_21015001	chr3L_21015001	RAL-882
1187	chr3L	21151863	21151896	chr3L	21156947	21156980	flea	9	5084	1.5	1.0	1.2	4.1	5117	chr3L	21151863	intron	Ac78C -	chr3L	21154422	intron	Ac78C -	chr3L	21156980	intron	Ac78C -	chr3L_9_21150001	chr3L_21150001	RAL-882
1190	chr3L	21243758	21243764	chr3L	21251320	21251324	412	5	7561	3.5	6.5	5.0	0.8	7566	chr3L	21243758	intron	Eip78C +	chr3L	21247541	intron	Eip78C +	chr3L	21251324	intron	Eip78C +	chr3L_5_21245001	chr3L_21245001	RAL-882
1194	chr3L	21498839	21498863	chr3L	21500471	21500499	1360	7	1635	6.0	4.0	5.0	1.2	1660	chr3L	21498839	intron	Glg1 -	chr3L	21499669	intron	Glg1 -	chr3L	21500499	intron	Glg1 -	chr3L_7_21495001	chr3L_21495001	RAL-882
1207	chr3L	22099675	22099693	chr3L	22105861	22105879	3S18	8	6186	6.5	2.0	4.2	1.5	6204	chr3L	22099675	intergenic	not near genes	chr3L	22102777	intergenic	not near genes	chr3L	22105879	intergenic	not near genes	chr3L_8_22100001	chr3L_22100001	RAL-882
1212	chr3L	22555768	22555802	chr3L	22563238	22563239	blood	8	7463	1.5	3.0	2.2	2.5	7471	chr3L	22555768	intergenic	not near genes	chr3L	22559504	intergenic	not near genes	chr3L	22563239	intergenic	not near genes	chr3L_8_22555001	chr3L_22555001	RAL-882
1214	chr3L	22617193	22617222	chr3L	22624640	22624674	blood	13	7450	2.0	3.5	2.8	3.4	7481	chr3L	22617193	intron	CG14459 -	chr3L	22620934	intron	CG14459 -	chr3L	22624674	intron	CG14459 -	chr3L_13_22620001	chr3L_22620001	RAL-882
1217	chr3L	22761387	22761415	chr3L	22766821	22766849	Ivk	6	5434	3.0	4.5	3.8	1.2	5462	chr3L	22761387	intron	SPoCk +	chr3L	22764118	intron	SPoCk +	chr3L	22766849	intron	SPoCk +	chr3L_6_22760001	chr3L_22760001	RAL-882
1221	chr3L	22865980	22866002	chr3L	22867113	22867135	Doc	7	1133	7.0	3.5	5.2	1.1	1155	chr3L	22865980	intron	CG33170 +	chr3L	22866558	intron	CG33170 +	chr3L	22867135	intron	CG33170 +	chr3L_7_22865001	chr3L_22865001	RAL-882
1223	chr3L	22989869	22989884	chr3L	22996838	22996843	297	7	6969	6.5	2.5	4.5	1.3	6974	chr3L	22989869	intergenic	not near genes	chr3L	22993356	intergenic	not near genes	chr3L	22996843	intergenic	not near genes	chr3L_7_22990001	chr3L_22990001	RAL-882
1224	chr3L	23042224	23042254	chr3L	23048976	23049007	gypsy6	12	6749	5.5	2.5	4.0	2.4	6783	chr3L	23042224	intergenic	not near genes	chr3L	23045616	intergenic	not near genes	chr3L	23049007	intergenic	not near genes	chr3L_12_23045001	chr3L_23045001	RAL-882
1229	chr3L	24012404	24012439	chr3L	24020745	24020780	roo	7	8339	1.5	5.5	3.5	1.6	8376	chr3L	24012404	intergenic	not near genes	chr3L	24016592	intergenic	not near genes	chr3L	24020780	intergenic	not near genes	chr3L_7_24015001	chr3L_24015001	RAL-882
1230	chr3L	24168629	24168654	chr3L	24176389	24176415	ZAM	11	7759	3.5	1.5	2.5	3.1	7786	chr3L	24168629	intron	Snap25 +	chr3L	24172522	intron	Snap25 +	chr3L	24176415	intron	Snap25 +	chr3L_11_24170001	chr3L_24170001	RAL-882
1233	chr3L	26029454	26029464	chr3L	26030172	26030181	G3	4	718	0.0	3.0	1.5	1.6	727	chr3L	26029454	intergenic	not near genes	chr3L	26029818	intergenic	not near genes	chr3L	26030181	intergenic	not near genes	chr3L_4_26025001	chr3L_26025001	RAL-882
1236	chr3R	2446800	2446823	chr3R	2449049	2449072	1360	5	2249	34.5	30.0	32.2	0.2	2272	chr3R	2446800	intergenic	not near genes	chr3R	2447936	intergenic	not near genes	chr3R	2449072	intergenic	not near genes	chr3R_5_2445001	chr3R_2445001	RAL-882
1240	chr3R	4105036	4105066	chr3R	4110240	4110270	copia	9	5204	3.0	1.0	2.0	3.0	5234	chr3R	4105036	intergenic	not near genes	chr3R	4107653	intergenic	not near genes	chr3R	4110270	intergenic	not near genes	chr3R_9_4105001	chr3R_4105001	RAL-882
1242	chr3R	4206071	4206094	chr3R	4211646	4211669	mdg3	7	5575	3.0	2.0	2.5	2.0	5598	chr3R	4206071	intron	CG14636 -	chr3R	4208870	intron	CG14636 -	chr3R	4211669	intron	CG14636 -	chr3R_7_4205001	chr3R_4205001	RAL-882
1243	chr3R	4408420	4408442	chr3R	4412712	4412745	Juan	5	4301	2.0	2.5	2.2	1.6	4325	chr3R	4408420	intron	CG32944 -	chr3R	4410582	intron	CG32944 -	chr3R	4412745	intron	CG32944 -	chr3R_5_4410001	chr3R_4410001	RAL-882
1249	chr3R	4887479	4887495	chr3R	4894856	4894872	rover	5	7376	5.0	1.0	3.0	1.2	7393	chr3R	4887479	intergenic	not near genes	chr3R	4891176	intergenic	not near genes	chr3R	4894872	intergenic	not near genes	chr3R_5_4890001	chr3R_4890001	RAL-882
1255	chr3R	5067984	5068007	chr3R	5073501	5073524	mdg3	4	5517	2.0	4.5	3.2	1.0	5540	chr3R	5067984	intergenic	not near genes	chr3R	5070754	intergenic	not near genes	chr3R	5073524	intergenic	not near genes	chr3R_4_5070001	chr3R_5070001	RAL-882
1257	chr3R	5338399	5338411	chr3R	5343576	5343588	Rt1c	5	5176	5.5	6.0	5.8	0.7	5189	chr3R	5338399	intron	mtd -	chr3R	5340994	intron	mtd -	chr3R	5343588	intron	mtd -	chr3R_5_5340001	chr3R_5340001	RAL-882
1258	chr3R	5338412	5338428	chr3R	5343573	5343605	Rt1c	6	5173	3.5	6.0	4.8	1.0	5193	chr3R	5338412	intron	mtd -	chr3R	5341008	intron	mtd -	chr3R	5343605	intron	mtd -	chr3R_6_5340001	chr3R_5340001	RAL-882
1261	chr3R	5445960	5445994	chr3R	5452420	5452454	Burdock	10	6460	1.0	1.0	1.0	5.0	6494	chr3R	5445960	intron	CG14669 +	chr3R	5449207	intron	CG14669 +	chr3R	5452454	intron	CG14669 +	chr3R_10_5445001	chr3R_5445001	RAL-882
1265	chr3R	5746014	5746045	chr3R	5746254	5746286	pogo	12	238	2.0	3.5	2.8	3.2	272	chr3R	5746014	3` UTR	Madm +	chr3R	5746150	3` UTR	Madm +	chr3R	5746286	3` UTR	Madm +	chr3R_12_5745001	chr3R_5745001	RAL-882
1266	chr3R	5809120	5809137	chr3R	5809353	5809378	pogo	6	239	3.0	5.5	4.2	1.2	258	chr3R	5809120	3` UTR	CG11000 +	chr3R	5809249	3` UTR	CG11000 +	chr3R	5809378	3` UTR	CG11000 +	chr3R_6_5805001	chr3R_5805001	RAL-882
1267	chr3R	5927560	5927586	chr3R	5927799	5927821	pogo	8	235	3.0	2.5	2.8	2.1	261	chr3R	5927560	intron	CG34113 -	chr3R	5927690	intron	CG34113 -	chr3R	5927821	intron	CG34113 -	chr3R_8_5925001	chr3R_5925001	RAL-882
1272	chr3R	6015962	6015995	chr3R	6024442	6024457	Tirant	12	8478	2.5	3.0	2.8	3.2	8495	chr3R	6015962	intergenic	not near genes	chr3R	6020210	intergenic	not near genes	chr3R	6024457	intergenic	not near genes	chr3R_12_6020001	chr3R_6020001	RAL-882
1275	chr3R	6158509	6158542	chr3R	6167092	6167125	Tirant	6	8583	5.0	3.0	4.0	1.2	8616	chr3R	6158509	intergenic	not near genes	chr3R	6162817	intergenic	not near genes	chr3R	6167125	intergenic	CG1077 +	chr3R_6_6160001	chr3R_6160001	RAL-882
1276	chr3R	6175172	6175200	chr3R	6182444	6182468	HMS-Beagle2	8	7271	4.5	2.5	3.5	1.8	7296	chr3R	6175172	intergenic	Osi1 +	chr3R	6178820	intron	CR45194 +	chr3R	6182468	intergenic	CR45194 +	chr3R_8_6175001	chr3R_6175001	RAL-882
1280	chr3R	6206290	6206317	chr3R	6206506	6206534	BS	10	216	2.5	5.0	3.8	2.1	244	chr3R	6206290	exon	Osi24 +	chr3R	6206412	intron	Osi24 +	chr3R	6206534	intron	Osi24 +	chr3R_10_6205001	chr3R_6205001	RAL-882
1283	chr3R	6510027	6510045	chr3R	6515108	6515126	jockey	4	5081	3.0	1.0	2.0	1.3	5099	chr3R	6510027	intergenic	not near genes	chr3R	6512576	intergenic	not near genes	chr3R	6515126	intergenic	not near genes	chr3R_4_6510001	chr3R_6510001	RAL-882
1287	chr3R	6737502	6737529	chr3R	6739287	6739316	Doc	9	1785	2.0	3.0	2.5	2.6	1814	chr3R	6737502	intron	pb -	chr3R	6738409	intron	pb -	chr3R	6739316	intron	pb -	chr3R_9_6735001	chr3R_6735001	RAL-882
1297	chr3R	7694575	7694601	chr3R	7713636	7713662	invader3	7	19061	3.0	0.0	1.5	2.8	19087	chr3R	7694575	3` UTR	Nlg1 +	chr3R	7704118	intergenic	not near genes	chr3R	7713662	intergenic	not near genes	chr3R_7_7700001	chr3R_7700001	RAL-882
1299	chr3R	7729466	7729498	chr3R	7737404	7737436	Stalker2	6	7938	3.5	1.0	2.2	1.9	7970	chr3R	7729466	intergenic	not near genes	chr3R	7733451	intergenic	not near genes	chr3R	7737436	intergenic	not near genes	chr3R_6_7730001	chr3R_7730001	RAL-882
1301	chr3R	7973321	7973344	chr3R	7974383	7974405	1360	8	1062	2.5	1.5	2.0	2.7	1084	chr3R	7973321	intergenic	not near genes	chr3R	7973863	intergenic	not near genes	chr3R	7974405	intergenic	CD98hc -	chr3R_8_7970001	chr3R_7970001	RAL-882
1304	chr3R	8094408	8094425	chr3R	8099713	8099730	Transpac	5	5305	2.0	3.5	2.8	1.3	5322	chr3R	8094408	intron	CG7900 +	chr3R	8097069	intron	CG7900 +	chr3R	8099730	intron	CG7900 +	chr3R_5_8095001	chr3R_8095001	RAL-882
1305	chr3R	8101762	8101791	chr3R	8104846	8104874	G2	8	3084	3.0	1.0	2.0	2.7	3112	chr3R	8101762	exon	CG7900 +	chr3R	8103318	intron	CG7900 +	chr3R	8104874	3` UTR	CG7900 +	chr3R_8_8100001	chr3R_8100001	RAL-882
1307	chr3R	8207558	8207590	chr3R	8208403	8208435	F-element	4	844	0.5	4.0	2.2	1.2	877	chr3R	8207558	intergenic	not near genes	chr3R	8207996	intergenic	not near genes	chr3R	8208435	intergenic	not near genes	chr3R_4_8205001	chr3R_8205001	RAL-882
1309	chr3R	8403006	8403036	chr3R	8412172	8412201	roo	12	9165	4.5	4.5	4.5	2.2	9195	chr3R	8403006	intron	CG45263 -	chr3R	8407604	intron	CG45263 -	chr3R	8412201	intron	CG45263 -	chr3R_12_8405001	chr3R_8405001	RAL-882
1311	chr3R	8570480	8570510	chr3R	8575116	8575146	HMS-Beagle	10	4636	2.5	4.5	3.5	2.2	4666	chr3R	8570480	intergenic	not near genes	chr3R	8572813	intergenic	not near genes	chr3R	8575146	intergenic	not near genes	chr3R_10_8570001	chr3R_8570001	RAL-882
1313	chr3R	8707355	8707387	chr3R	8709796	8709828	jockey	13	2441	4.5	3.5	4.0	2.6	2473	chr3R	8707355	intergenic	not near genes	chr3R	8708592	intergenic	not near genes	chr3R	8709828	intergenic	not near genes	chr3R_13_8705001	chr3R_8705001	RAL-882
1315	chr3R	8894876	8894900	chr3R	8896029	8896056	1360	6	1156	2.5	2.5	2.5	1.7	1180	chr3R	8894876	intron	pyd -	chr3R	8895466	intron	pyd -	chr3R	8896056	intron	pyd -	chr3R_6_8895001	chr3R_8895001	RAL-882
1324	chr3R	9278779	9278813	chr3R	9284039	9284046	Rt1a	12	5257	2.5	3.5	3.0	3.0	5267	chr3R	9278779	intergenic	not near genes	chr3R	9281412	intergenic	not near genes	chr3R	9284046	intergenic	not near genes	chr3R_12_9280001	chr3R_9280001	RAL-882
1326	chr3R	9319571	9319602	chr3R	9320006	9320037	jockey	6	433	6.0	2.5	4.2	1.2	466	chr3R	9319571	intron	CG8861 -	chr3R	9319804	intron	CG8861 -	chr3R	9320037	intron	CG8861 -	chr3R_6_9315001	chr3R_9315001	RAL-882
1327	chr3R	9361822	9361845	chr3R	9362063	9362086	pogo	5	241	1.0	0.5	0.8	2.8	264	chr3R	9361822	3` UTR	CG45050 +	chr3R	9361954	3` UTR	CG45050 +	chr3R	9362086	3` UTR	CG45050 +	chr3R_5_9360001	chr3R_9360001	RAL-882
1333	chr3R	9699977	9700003	chr3R	9700066	9700079	1360	16	86	3.5	2.0	2.8	4.2	102	chr3R	9699977	intron	Unc-115a -	chr3R	9700028	intron	Unc-115a -	chr3R	9700079	intron	Unc-115a -	chr3R_16_9700001	chr3R_9700001	RAL-882
1336	chr3R	10231791	10231814	chr3R	10237367	10237391	mdg3	6	5575	1.5	2.5	2.0	2.0	5600	chr3R	10231791	intron	CG42795 +	chr3R	10234591	intron	CG42795 +	chr3R	10237391	intron	CG42795 +	chr3R_6_10230001	chr3R_10230001	RAL-882
1360	chr3R	11379245	11379269	chr3R	11388400	11388424	roo	8	9154	2.0	2.0	2.0	2.7	9179	chr3R	11379245	intron	pros +	chr3R	11383834	intron	pros +	chr3R	11388424	intron	pros +	chr3R_8_11380001	chr3R_11380001	RAL-882
1364	chr3R	11841062	11841097	chr3R	11846249	11846288	BS	10	5190	3.0	1.5	2.2	3.1	5226	chr3R	11841062	intron	CG6959 -	chr3R	11843675	intron	CG6959 -	chr3R	11846288	intron	CG6959 -	chr3R_10_11840001	chr3R_11840001	RAL-882
1368	chr3R	12022887	12022916	chr3R	12025063	12025093	pogo	5	2177	1.0	8.0	4.5	0.9	2206	chr3R	12022887	intergenic	not near genes	chr3R	12023990	intergenic	not near genes	chr3R	12025093	intergenic	not near genes	chr3R_5_12020001	chr3R_12020001	RAL-882
1382	chr3R	12920150	12920186	chr3R	12925353	12925388	copia	10	5199	4.5	3.0	3.8	2.1	5238	chr3R	12920150	intron	beat-Vb +	chr3R	12922769	intron	beat-Vb +	chr3R	12925388	intron	beat-Vb +	chr3R_10_12920001	chr3R_12920001	RAL-882
1388	chr3R	13143037	13143060	chr3R	13148614	13148637	mdg3	6	5577	2.0	6.0	4.0	1.2	5600	chr3R	13143037	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13145837	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13148637	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_6_13145001	chr3R_13145001	RAL-882
1389	chr3R	13143062	13143066	chr3R	13148613	13148643	mdg3	4	5566	2.0	6.0	4.0	0.8	5581	chr3R	13143062	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13145852	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13148643	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_4_13145001	chr3R_13145001	RAL-882
1396	chr3R	13314114	13314133	chr3R	13318902	13318909	Doc	6	4783	3.0	2.5	2.8	1.6	4795	chr3R	13314114	intergenic	not near genes	chr3R	13316512	intergenic	not near genes	chr3R	13318909	intergenic	CG45080 -	chr3R_6_13315001	chr3R_13315001	RAL-882
1409	chr3R	14021651	14021673	chr3R	14023467	14023489	S-element	6	1816	7.5	2.5	5.0	1.0	1838	chr3R	14021651	intron	rdx -	chr3R	14022570	intron	rdx -	chr3R	14023489	intron	rdx -	chr3R_6_14020001	chr3R_14020001	RAL-882
1413	chr3R	14246401	14246418	chr3R	14247887	14247899	jockey	6	1489	5.0	3.5	4.2	1.2	1498	chr3R	14246401	intergenic	not near genes	chr3R	14247150	intergenic	not near genes	chr3R	14247899	intergenic	not near genes	chr3R_6_14245001	chr3R_14245001	RAL-882
1425	chr3R	15041437	15041460	chr3R	15045205	15045227	Doc	6	3768	0.0	6.5	3.2	1.4	3790	chr3R	15041437	intergenic	not near genes	chr3R	15043332	intergenic	not near genes	chr3R	15045227	intergenic	not near genes	chr3R_6_15040001	chr3R_15040001	RAL-882
1426	chr3R	15079809	15079837	chr3R	15080050	15080078	pogo	7	241	1.0	4.0	2.5	2.0	269	chr3R	15079809	3` UTR	CG6966 -	chr3R	15079944	3` UTR	CG6966 -	chr3R	15080078	3` UTR	CG6966 -	chr3R_7_15075001	chr3R_15075001	RAL-882
1427	chr3R	15132059	15132088	chr3R	15135119	15135133	Juan	7	3057	6.0	6.0	6.0	1.0	3074	chr3R	15132059	intergenic	CG42788 -	chr3R	15133596	intergenic	not near genes	chr3R	15135133	intergenic	CG6912 -	chr3R_7_15130001	chr3R_15130001	RAL-882
1433	chr3R	15601163	15601192	chr3R	15608685	15608714	412	11	7519	5.0	5.0	5.0	1.8	7551	chr3R	15601163	intergenic	not near genes	chr3R	15604938	intergenic	not near genes	chr3R	15608714	intergenic	not near genes	chr3R_11_15600001	chr3R_15600001	RAL-882
1449	chr3R	16756320	16756350	chr3R	16762511	16762541	diver	11	6191	3.5	2.0	2.8	2.9	6221	chr3R	16756320	intron	bxd -	chr3R	16759430	intron	bxd -	chr3R	16762541	intron	bxd -	chr3R_11_16755001	chr3R_16755001	RAL-882
1454	chr3R	17294668	17294702	chr3R	17295095	17295130	BS	7	428	3.5	3.0	3.2	1.7	462	chr3R	17294668	intergenic	not near genes	chr3R	17294899	intergenic	not near genes	chr3R	17295130	intergenic	not near genes	chr3R_7_17290001	chr3R_17290001	RAL-882
1459	chr3R	17638321	17638351	chr3R	17638807	17638837	roo	4	486	3.5	1.0	2.2	1.2	516	chr3R	17638321	intron	CG43175 +	chr3R	17638579	intron	CG43175 +	chr3R	17638837	intron,intron	CG43175 +,CR45222 +	chr3R_4_17635001	chr3R_17635001	RAL-882
1463	chr3R	17925869	17925889	chr3R	17927317	17927356	hobo	7	1457	3.5	5.5	4.5	1.3	1487	chr3R	17925869	intron	cpo +	chr3R	17926612	intron	cpo +	chr3R	17927356	intron	cpo +	chr3R_7_17925001	chr3R_17925001	RAL-882
1472	chr3R	18606503	18606532	chr3R	18610735	18610764	F-element	4	4232	4.0	3.5	3.8	0.8	4261	chr3R	18606503	intron,intron	qin +,CG14304 -	chr3R	18608634	intron,intron	qin +,CG14304 -	chr3R	18610764	intron,intron	qin +,CG14304 -	chr3R_4_18605001	chr3R_18605001	RAL-882
1480	chr3R	19136407	19136419	chr3R	19139796	19139805	Bari1	4	3388	37.5	11.5	24.5	0.2	3398	chr3R	19136407	exon	Cyp12a4 +	chr3R	19138106	intergenic	not near genes	chr3R	19139805	3` UTR	Ppcs -	chr3R_4_19135001	chr3R_19135001	RAL-882
1491	chr3R	20109537	20109571	chr3R	20114743	20114777	copia	12	5205	2.0	1.0	1.5	4.8	5240	chr3R	20109537	intergenic	not near genes	chr3R	20112157	intergenic	not near genes	chr3R	20114777	intergenic	CG10887 +	chr3R_12_20110001	chr3R_20110001	RAL-882
1494	chr3R	20156696	20156717	chr3R	20165865	20165887	roo	9	9167	5.0	1.5	3.2	2.1	9191	chr3R	20156696	intergenic	not near genes	chr3R	20161292	intergenic	not near genes	chr3R	20165887	intergenic	not near genes	chr3R_9_20160001	chr3R_20160001	RAL-882
1497	chr3R	20266515	20266544	chr3R	20272986	20273010	Burdock	7	6470	2.0	1.5	1.8	2.5	6495	chr3R	20266515	intron	cic +	chr3R	20269762	intron	cic +	chr3R	20273010	intron	cic +	chr3R_7_20265001	chr3R_20265001	RAL-882
1499	chr3R	20331010	20331027	chr3R	20331496	20331513	roo	5	486	1.5	1.0	1.2	2.3	503	chr3R	20331010	intergenic	Sirt2 +	chr3R	20331262	intergenic	Sirt2 +	chr3R	20331513	intergenic	not near genes	chr3R_5_20330001	chr3R_20330001	RAL-882
1502	chr3R	20506587	20506615	chr3R	20507390	20507418	BS	4	802	3.0	3.0	3.0	1.0	831	chr3R	20506587	intergenic	Or92a +	chr3R	20507002	intergenic	CG4288 -	chr3R	20507418	3` UTR	CG4288 -	chr3R_4_20505001	chr3R_20505001	RAL-882
1509	chr3R	20854487	20854515	chr3R	20859277	20859301	Doc	8	4783	12.0	3.0	7.5	0.9	4814	chr3R	20854487	intron	Ir93a -	chr3R	20856894	intron	Ir93a -	chr3R	20859301	exon	Ir93a -	chr3R_8_20855001	chr3R_20855001	RAL-882
1514	chr3R	21141682	21141702	chr3R	21150158	21150181	Tirant	8	8470	4.5	5.0	4.8	1.4	8499	chr3R	21141682	intron	SNF4Agamma +	chr3R	21145932	intron	SNF4Agamma +	chr3R	21150181	intron	SNF4Agamma +	chr3R_8_21145001	chr3R_21145001	RAL-882
1542	chr3R	22450541	22450576	chr3R	22453181	22453216	NOF	14	2638	2.0	5.0	3.5	3.1	2675	chr3R	22450541	intron	CG34376 +	chr3R	22451878	intron	CG34376 +	chr3R	22453216	intron	CG34376 +	chr3R_14_22450001	chr3R_22450001	RAL-882
1548	chr3R	22881205	22881227	chr3R	22884911	22884933	Doc	7	3706	2.5	3.0	2.8	1.8	3728	chr3R	22881205	intergenic	not near genes	chr3R	22883069	intergenic	not near genes	chr3R	22884933	intergenic	not near genes	chr3R_7_22880001	chr3R_22880001	RAL-882
1559	chr3R	23558400	23558428	chr3R	23560180	23560207	Bari1	5	1780	1.0	1.0	1.0	2.5	1807	chr3R	23558400	intron	beat-IV +	chr3R	23559304	intron	beat-IV +	chr3R	23560207	intron	beat-IV +	chr3R_5_23555001	chr3R_23555001	RAL-882
1561	chr3R	23684701	23684723	chr3R	23685181	23685188	roo	6	473	5.0	5.0	5.0	1.0	487	chr3R	23684701	exon	CG18754 +	chr3R	23684944	intron	CG18754 +	chr3R	23685188	exon	CG18754 +	chr3R_6_23680001	chr3R_23680001	RAL-882
1563	chr3R	23835415	23835437	chr3R	23844565	23844587	roo	4	9150	3.5	3.5	3.5	0.9	9172	chr3R	23835415	intron	CG34355 +	chr3R	23840001	intron	CG34355 +	chr3R	23844587	intron	CG34355 +	chr3R_4_23840001	chr3R_23840001	RAL-882
1569	chr3R	24072093	24072110	chr3R	24072521	24072548	jockey	6	435	7.0	7.0	7.0	0.8	455	chr3R	24072093	intron	4EHP -	chr3R	24072320	intron	4EHP -	chr3R	24072548	intron	4EHP -	chr3R_6_24070001	chr3R_24070001	RAL-882
1570	chr3R	24076920	24076943	chr3R	24078382	24078410	hobo	9	1466	5.0	5.0	5.0	1.5	1490	chr3R	24076920	intron	4EHP -	chr3R	24077665	intron	4EHP -	chr3R	24078410	intron	4EHP -	chr3R_9_24075001	chr3R_24075001	RAL-882
1572	chr3R	24207217	24207245	chr3R	24212291	24212321	flea	9	5076	8.0	5.5	6.8	1.2	5104	chr3R	24207217	intron	twin -	chr3R	24209769	intron	twin -	chr3R	24212321	intron	twin -	chr3R_9_24205001	chr3R_24205001	RAL-882
1577	chr3R	24493277	24493306	chr3R	24493504	24493533	BS	5	226	1.0	2.5	1.8	1.8	256	chr3R	24493277	intergenic	not near genes	chr3R	24493405	intergenic	not near genes	chr3R	24493533	intergenic	not near genes	chr3R_5_24490001	chr3R_24490001	RAL-882
1598	chr3R	25832695	25832720	chr3R	25841877	25841900	roo	10	9179	4.0	3.0	3.5	2.2	9205	chr3R	25832695	exon	alpha4GT2 +	chr3R	25837298	intron	alpha4GT2 +	chr3R	25841900	exon	alpha4GT2 +	chr3R_10_25835001	chr3R_25835001	RAL-882
1604	chr3R	26376327	26376357	chr3R	26385487	26385515	roo	8	9156	1.5	0.0	0.8	4.4	9188	chr3R	26376327	intergenic	not near genes	chr3R	26380921	intergenic	not near genes	chr3R	26385515	intergenic	not near genes	chr3R_8_26380001	chr3R_26380001	RAL-882
1608	chr3R	26558328	26558359	chr3R	26565641	26565670	Stalker4	5	7306	5.5	4.5	5.0	0.8	7342	chr3R	26558328	intron	scrib +	chr3R	26561999	intron	scrib +	chr3R	26565670	intron	scrib +	chr3R_5_26560001	chr3R_26560001	RAL-882
1610	chr3R	26642734	26642760	chr3R	26643126	26643154	jockey	7	393	3.5	3.5	3.5	1.6	420	chr3R	26642734	intergenic	not near genes	chr3R	26642944	intergenic	not near genes	chr3R	26643154	intergenic	not near genes	chr3R_7_26640001	chr3R_26640001	RAL-882
1617	chr3R	26810552	26810586	chr3R	26811037	26811071	roo	10	485	1.5	3.5	2.5	2.9	519	chr3R	26810552	intron	Tl +	chr3R	26810812	intron	Tl +	chr3R	26811071	intron	Tl +	chr3R_10_26810001	chr3R_26810001	RAL-882
1619	chr3R	27007410	27007423	chr3R	27016540	27016557	roo	5	9134	0.5	3.0	1.8	1.8	9147	chr3R	27007410	intron	RYa-R +	chr3R	27011984	intron	RYa-R +	chr3R	27016557	intron	RYa-R +	chr3R_5_27010001	chr3R_27010001	RAL-882
1623	chr3R	27140516	27140548	chr3R	27148126	27148158	412	8	7609	4.0	3.0	3.5	1.8	7642	chr3R	27140516	intron	CG6051 -	chr3R	27144337	intron	CG6051 -	chr3R	27148158	intron	CG6051 -	chr3R_8_27140001	chr3R_27140001	RAL-882
1628	chr3R	27342793	27342824	chr3R	27351373	27351405	Tirant	5	8581	2.0	3.0	2.5	1.4	8612	chr3R	27342793	intron	CG42534 +	chr3R	27347099	intron	CG42534 +	chr3R	27351405	intron	CG42534 +	chr3R_5_27345001	chr3R_27345001	RAL-882
1637	chr3R	27725565	27725603	chr3R	27731006	27731044	I-element	7	5442	1.0	0.0	0.5	4.7	5479	chr3R	27725565	intergenic	not near genes	chr3R	27728304	intergenic	not near genes	chr3R	27731044	intergenic	not near genes	chr3R_7_27725001	chr3R_27725001	RAL-882
1642	chr3R	27856757	27856791	chr3R	27858240	27858274	hopper2	14	1483	2.5	2.5	2.5	4.0	1517	chr3R	27856757	intron	CG34353 -	chr3R	27857516	intron	CG34353 -	chr3R	27858274	intron	CG34353 -	chr3R_14_27855001	chr3R_27855001	RAL-882
1643	chr3R	27862952	27862975	chr3R	27868257	27868280	Transpac	11	5304	5.0	4.5	4.8	1.9	5328	chr3R	27862952	intron	CG34353 -	chr3R	27865616	intron	CG34353 -	chr3R	27868280	intron	CG34353 -	chr3R_11_27865001	chr3R_27865001	RAL-882
1644	chr3R	27875703	27875733	chr3R	27882758	27882785	297	11	7055	4.0	4.5	4.2	2.1	7082	chr3R	27875703	intron	CG34353 -	chr3R	27879244	intron	CG34353 -	chr3R	27882785	intron	CG34353 -	chr3R_11_27875001	chr3R_27875001	RAL-882
1649	chr3R	28068498	28068527	chr3R	28073940	28073969	I-element	6	5442	1.5	4.5	3.0	1.5	5471	chr3R	28068498	intron	CG34362 +	chr3R	28071234	intron	CG34362 +	chr3R	28073969	intron	CG34362 +	chr3R_6_28070001	chr3R_28070001	RAL-882
1651	chr3R	28173672	28173704	chr3R	28181101	28181134	mdg1	9	7430	0.0	0.5	0.2	7.5	7462	chr3R	28173672	intron	CG34354 +	chr3R	28177403	intron	CG34354 +	chr3R	28181134	intron	CG34354 +	chr3R_9_28175001	chr3R_28175001	RAL-882
1652	chr3R	28253353	28253364	chr3R	28255858	28255874	jockey	10	2509	5.0	4.5	4.8	1.7	2521	chr3R	28253353	intergenic	not near genes	chr3R	28254614	intergenic	not near genes	chr3R	28255874	intergenic	not near genes	chr3R_10_28250001	chr3R_28250001	RAL-882
1655	chr3R	28302111	28302129	chr3R	28302550	28302568	jockey	4	439	1.0	2.0	1.5	1.6	457	chr3R	28302111	intergenic	not near genes	chr3R	28302340	intergenic	not near genes	chr3R	28302568	intergenic	not near genes	chr3R_4_28300001	chr3R_28300001	RAL-882
1669	chr3R	28763901	28763921	chr3R	28771344	28771364	Stalker4	4	7443	0.0	0.0	0.0	4.0	7463	chr3R	28763901	intergenic	not near genes	chr3R	28767632	intergenic	not near genes	chr3R	28771364	intergenic	not near genes	chr3R_4_28765001	chr3R_28765001	RAL-882
1670	chr3R	28792873	28792904	chr3R	28797966	28797998	jockey	7	5092	0.5	5.5	3.0	1.8	5125	chr3R	28792873	intergenic	not near genes	chr3R	28795436	intergenic	not near genes	chr3R	28797998	intergenic	not near genes	chr3R_7_28795001	chr3R_28795001	RAL-882
1680	chr3R	29079382	29079403	chr3R	29080751	29080775	NOF	7	1371	3.5	4.0	3.8	1.5	1393	chr3R	29079382	intron	CG11873 +	chr3R	29080078	intron	CG11873 +	chr3R	29080775	intron	CG11873 +	chr3R_7_29080001	chr3R_29080001	RAL-882
1690	chr3R	29882017	29882053	chr3R	29891174	29891210	roo	16	9155	3.0	2.0	2.5	4.6	9193	chr3R	29882017	intron	CG31038 +	chr3R	29886614	intron	CG31038 +	chr3R	29891210	intron	CG31038 +	chr3R_16_29885001	chr3R_29885001	RAL-882
1694	chr3R	30084850	30084886	chr3R	30086317	30086352	hobo	10	1467	1.5	5.0	3.2	2.4	1502	chr3R	30084850	intron	sima +	chr3R	30085601	intron	sima +	chr3R	30086352	intron	sima +	chr3R_10_30085001	chr3R_30085001	RAL-882
1700	chr3R	30317325	30317359	chr3R	30324917	30324951	roo	7	7592	0.5	2.0	1.2	3.2	7626	chr3R	30317325	intron	hdc +	chr3R	30321138	intron	hdc +	chr3R	30324951	intron	hdc +	chr3R_7_30320001	chr3R_30320001	RAL-882
1702	chr3R	30375537	30375572	chr3R	30383162	30383197	412	6	7625	2.0	5.5	3.8	1.2	7660	chr3R	30375537	intergenic	not near genes	chr3R	30379367	intergenic	not near genes	chr3R	30383197	intergenic	not near genes	chr3R_6_30375001	chr3R_30375001	RAL-882
1703	chr3R	30396217	30396247	chr3R	30404482	30404513	roo	9	8265	3.0	3.0	3.0	2.2	8296	chr3R	30396217	intergenic	not near genes	chr3R	30400365	intergenic	not near genes	chr3R	30404513	5` UTR	CR45570 +	chr3R_9_30400001	chr3R_30400001	RAL-882
1705	chr3R	30679522	30679552	chr3R	30686988	30687019	blood	6	7468	3.0	2.5	2.8	1.6	7497	chr3R	30679522	intergenic	not near genes	chr3R	30683270	intergenic	not near genes	chr3R	30687019	intergenic	not near genes	chr3R_6_30680001	chr3R_30680001	RAL-882
1708	chr3R	30818814	30818844	chr3R	30820378	30820403	1360	11	1563	4.5	1.0	2.8	2.9	1589	chr3R	30818814	intron	cindr +	chr3R	30819608	intron	cindr +	chr3R	30820403	intron	cindr +	chr3R_11_30815001	chr3R_30815001	RAL-882
1717	chr3R	31279381	31279385	chr3R	31285567	31285573	diver	5	6189	8.5	3.5	6.0	0.7	6192	chr3R	31279381	intergenic	not near genes	chr3R	31282477	intergenic	not near genes	chr3R	31285573	intergenic	not near genes	chr3R_5_31280001	chr3R_31280001	RAL-882
1718	chr3R	31279386	31279402	chr3R	31285564	31285577	diver	8	6182	5.5	3.5	4.5	1.5	6191	chr3R	31279386	intergenic	not near genes	chr3R	31282482	intergenic	not near genes	chr3R	31285577	intergenic	not near genes	chr3R_8_31280001	chr3R_31280001	RAL-882
1720	chr3R	31413089	31413120	chr3R	31418289	31418320	copia	8	5200	1.0	4.5	2.8	2.1	5231	chr3R	31413089	intron	Gprk2 +	chr3R	31415704	intron	Gprk2 +	chr3R	31418320	intron	Gprk2 +	chr3R_8_31415001	chr3R_31415001	RAL-882
1731	chr3R	31691536	31691564	chr3R	31696299	31696311	Doc	12	4755	2.0	4.0	3.0	3.0	4775	chr3R	31691536	intergenic	not near genes	chr3R	31693924	intergenic	not near genes	chr3R	31696311	intergenic	not near genes	chr3R_12_31690001	chr3R_31690001	RAL-882
1738	chr3R	31997990	31998023	chr3R	32005460	32005493	blood	9	7467	3.0	6.0	4.5	1.6	7503	chr3R	31997990	intron	heph -	chr3R	32001742	intron	heph -	chr3R	32005493	intron	heph -	chr3R_9_32000001	chr3R_32000001	RAL-882
1741	chr4	76497	76515	chr4	81940	81956	I-element	4	5442	5.0	1.5	3.2	1.0	5459	chr4	76497	intron	pan +	chr4	79226	intron	pan +	chr4	81956	intron	pan +	chr4_4_75001	chr4_75001	RAL-882
1742	chr4	319997	320005	chr4	328173	328181	Stalker2	4	8176	3.5	0.0	1.8	1.4	8184	chr4	319997	3` UTR	CG32850 +	chr4	324089	intron	CG32850 +	chr4	328181	3` UTR	CG32850 +	chr4_4_320001	chr4_320001	RAL-882
1743	chr4	671605	671634	chr4	680188	680208	Tirant	9	8582	9.0	4.5	6.8	1.2	8603	chr4	671605	intron	CG11360 +	chr4	675906	intron	CG11360 +	chr4	680208	intron	CG11360 +	chr4_9_675001	chr4_675001	RAL-882
1746	chrX	295863	295882	chrX	303483	303491	412	9	7617	4.0	4.0	4.0	1.8	7628	chrX	295863	intron	CG3777 +	chrX	299677	intron	CG3777 +	chrX	303491	intron	CG3777 +	chrX_9_295001	chrX_295001	RAL-882
1747	chrX	318478	318486	chrX	323563	323571	flea	5	5085	4.0	2.0	3.0	1.2	5093	chrX	318478	intron,intron	CG3777 +,CG32816 -	chrX	321024	intron,intron	CG3777 +,CG32816 -	chrX	323571	intron,intron	CG3777 +,CG32816 -	chrX_5_320001	chrX_320001	RAL-882
1748	chrX	551424	551454	chrX	558987	559013	412	8	7560	2.5	4.5	3.5	1.8	7589	chrX	551424	intron	Appl +	chrX	555218	intron	Appl +	chrX	559013	intron	Appl +	chrX_8_555001	chrX_555001	RAL-882
1756	chrX	827599	827633	chrX	835391	835425	roo	12	7792	5.5	1.5	3.5	2.7	7826	chrX	827599	intron	CG43867 -	chrX	831512	intron	CG43867 -	chrX	835425	intron	CG43867 -	chrX_12_830001	chrX_830001	RAL-882
1757	chrX	906703	906715	chrX	908491	908503	S-element	6	1789	4.5	7.0	5.8	0.9	1800	chrX	906703	intron	CG43867 -	chrX	907603	intron	CG43867 -	chrX	908503	intron	CG43867 -	chrX_6_905001	chrX_905001	RAL-882
1759	chrX	1518041	1518066	chrX	1523442	1523468	jockey	6	5401	3.5	4.0	3.8	1.2	5427	chrX	1518041	intergenic	inc +	chrX	1520754	intergenic	not near genes	chrX	1523468	intergenic	not near genes	chrX_6_1520001	chrX_1520001	RAL-882
1761	chrX	1627979	1628002	chrX	1635447	1635470	gtwin	11	7466	2.5	4.5	3.5	2.4	7491	chrX	1627979	intron,intron	Mur2B -,br +	chrX	1631724	intron,intron	Mur2B -,br +	chrX	1635470	intron,intron	Mur2B -,br +	chrX_11_1630001	chrX_1630001	RAL-882
1762	chrX	1930552	1930567	chrX	1938123	1938138	opus	4	7571	0.5	1.5	1.0	2.0	7586	chrX	1930552	intergenic	CG11596 +	chrX	1934345	intergenic	not near genes	chrX	1938138	3` UTR	CG3857 -	chrX_4_1930001	chrX_1930001	RAL-882
1766	chrX	2664383	2664419	chrX	2665529	2665556	1360	7	1144	1.5	1.0	1.2	3.2	1173	chrX	2664383	intron	sgg +	chrX	2664970	intron	sgg +	chrX	2665556	intron	sgg +	chrX_7_2660001	chrX_2660001	RAL-882
1771	chrX	3058023	3058051	chrX	3058264	3058292	pogo	6	241	2.0	0.0	1.0	3.0	269	chrX	3058023	intron	kirre +	chrX	3058158	intron	kirre +	chrX	3058292	intron	kirre +	chrX_6_3055001	chrX_3055001	RAL-882
1772	chrX	3075633	3075667	chrX	3080939	3080973	Transpac	10	5306	2.0	3.0	2.5	2.9	5340	chrX	3075633	intron	kirre +	chrX	3078303	intron	kirre +	chrX	3080973	intron	kirre +	chrX_10_3075001	chrX_3075001	RAL-882
1775	chrX	3415036	3415048	chrX	3421216	3421233	3S18	6	6184	0.5	3.5	2.0	2.0	6197	chrX	3415036	intron,intron	CR44999 +,CG12535 -	chrX	3418134	intron,intron	CR44999 +,CG12535 -	chrX	3421233	intron,intron	CR44999 +,CG12535 -	chrX_6_3415001	chrX_3415001	RAL-882
1776	chrX	3493098	3493115	chrX	3502255	3502274	roo	5	9158	5.0	1.0	3.0	1.2	9176	chrX	3493098	intron,intron	CR44999 +,Gas8 -	chrX	3497686	intron,intron	CR44999 +,Gas8 -	chrX	3502274	intron,intron	CR44999 +,Gas8 -	chrX_5_3495001	chrX_3495001	RAL-882
1777	chrX	3597549	3597583	chrX	3619717	3619751	roo	10	22166	1.5	2.5	2.0	3.3	22202	chrX	3597549	intron	AstA-R1 +	chrX	3608650	intron	AstA-R1 +	chrX	3619751	intron	AstA-R1 +	chrX_10_3605001	chrX_3605001	RAL-882
1779	chrX	3726759	3726797	chrX	3730155	3730193	NOF	5	3396	4.0	0.0	2.0	1.7	3434	chrX	3726759	intron	tlk +	chrX	3728476	intron	tlk +	chrX	3730193	intron	tlk +	chrX_5_3725001	chrX_3725001	RAL-882
1780	chrX	3842320	3842350	chrX	3842561	3842591	pogo	6	241	2.0	1.0	1.5	2.4	271	chrX	3842320	intron	ec +	chrX	3842456	intron	ec +	chrX	3842591	intron	ec +	chrX_6_3840001	chrX_3840001	RAL-882
1783	chrX	3986866	3986894	chrX	3994499	3994527	412	4	7633	3.0	0.0	1.5	1.6	7661	chrX	3986866	intergenic	not near genes	chrX	3990696	intergenic	not near genes	chrX	3994527	intergenic	not near genes	chrX_4_3990001	chrX_3990001	RAL-882
1792	chrX	4763265	4763284	chrX	4763746	4763772	Stalker4	7	487	3.5	1.0	2.2	2.2	507	chrX	4763265	intergenic	not near genes	chrX	4763518	intergenic	not near genes	chrX	4763772	intergenic	not near genes	chrX_7_4760001	chrX_4760001	RAL-882
1793	chrX	4792383	4792409	chrX	4792816	4792842	jockey	12	433	2.5	6.5	4.5	2.2	459	chrX	4792383	intergenic	not near genes	chrX	4792612	intergenic	not near genes	chrX	4792842	intergenic	not near genes	chrX_12_4790001	chrX_4790001	RAL-882
1794	chrX	4827970	4827988	chrX	4835339	4835359	Stalker4	6	7370	1.5	5.5	3.5	1.3	7389	chrX	4827970	intergenic	not near genes	chrX	4831664	intergenic	not near genes	chrX	4835359	intergenic	not near genes	chrX_6_4830001	chrX_4830001	RAL-882
1795	chrX	4827994	4828002	chrX	4835337	4835354	Stalker4	4	7349	0.5	5.0	2.8	1.1	7360	chrX	4827994	intergenic	not near genes	chrX	4831674	intergenic	not near genes	chrX	4835354	intergenic	not near genes	chrX_4_4830001	chrX_4830001	RAL-882
1798	chrX	4990056	4990066	chrX	4997270	4997280	roo	4	7214	1.5	2.0	1.8	1.4	7224	chrX	4990056	intron	CR44833 -	chrX	4993668	intron	CR44833 -	chrX	4997280	intron	CR44833 -	chrX_4_4990001	chrX_4990001	RAL-882
1800	chrX	5096282	5096300	chrX	5103847	5103865	springer	7	7565	2.5	6.0	4.2	1.3	7583	chrX	5096282	intron,intron	CG15465 +,rg +	chrX	5100074	intron,intron	CG15465 +,rg +	chrX	5103865	intron,intron	CG15465 +,rg +	chrX_7_5100001	chrX_5100001	RAL-882
1803	chrX	5524840	5524872	chrX	5528703	5528734	412	4	3862	3.5	1.5	2.5	1.1	3894	chrX	5524840	intergenic	snoRNA:Psi28S-3342 -	chrX	5526787	intergenic	not near genes	chrX	5528734	intergenic	Vsx2 -	chrX_4_5525001	chrX_5525001	RAL-882
1807	chrX	5883829	5883841	chrX	5884070	5884077	pogo	4	240	4.0	7.0	5.5	0.6	248	chrX	5883829	intron	CR45668 -	chrX	5883953	intron	CR45668 -	chrX	5884077	intron	CR45668 -	chrX_4_5880001	chrX_5880001	RAL-882
1808	chrX	5884166	5884187	chrX	5884407	5884426	pogo	5	241	4.0	2.5	3.2	1.2	260	chrX	5884166	intron	CR45668 -	chrX	5884296	intron	CR45668 -	chrX	5884426	intron	CR45668 -	chrX_5_5880001	chrX_5880001	RAL-882
1814	chrX	6335222	6335244	chrX	6337730	6337754	Tirant	7	2509	0.0	7.0	3.5	1.6	2532	chrX	6335222	intergenic	not near genes	chrX	6336488	intergenic	not near genes	chrX	6337754	intergenic	CG3842 +	chrX_7_6335001	chrX_6335001	RAL-882
1815	chrX	6392877	6392899	chrX	6397641	6397662	Doc	10	4765	4.0	6.5	5.2	1.6	4785	chrX	6392877	intergenic	not near genes	chrX	6395270	intergenic	not near genes	chrX	6397662	intergenic	not near genes	chrX_10_6395001	chrX_6395001	RAL-882
1816	chrX	6562822	6562846	chrX	6571304	6571328	Tirant	10	8479	2.0	3.5	2.8	2.6	8506	chrX	6562822	intron	CG34417 +	chrX	6567075	intron	CG34417 +	chrX	6571328	intron	CG34417 +	chrX_10_6565001	chrX_6565001	RAL-882
1819	chrX	7023603	7023628	chrX	7030993	7031018	Tabor	9	7389	4.0	5.5	4.8	1.6	7415	chrX	7023603	intron	CG12541 -	chrX	7027310	intron	CG12541 -	chrX	7031018	intron	CG12541 -	chrX_9_7025001	chrX_7025001	RAL-882
1821	chrX	7125251	7125279	chrX	7134410	7134421	roo	4	9155	2.0	6.5	4.2	0.8	9170	chrX	7125251	intergenic	not near genes	chrX	7129836	intergenic	not near genes	chrX	7134421	intergenic	not near genes	chrX_4_7125001	chrX_7125001	RAL-882
1824	chrX	7702923	7702935	chrX	7703337	7703374	jockey	7	434	2.0	1.0	1.5	2.8	451	chrX	7702923	intron	CHES-1-like -	chrX	7703148	intron	CHES-1-like -	chrX	7703374	intron	CHES-1-like -	chrX_7_7700001	chrX_7700001	RAL-882
1826	chrX	7784238	7784254	chrX	7784539	7784542	jockey	6	299	2.0	4.0	3.0	1.5	304	chrX	7784238	intergenic	not near genes	chrX	7784390	intergenic	not near genes	chrX	7784542	intergenic	not near genes	chrX_6_7780001	chrX_7780001	RAL-882
1830	chrX	8031431	8031456	chrX	8035740	8035765	Juan	4	4309	4.0	3.5	3.8	0.8	4334	chrX	8031431	intergenic	not near genes	chrX	8033598	intergenic	not near genes	chrX	8035765	3` UTR	CG2233 -	chrX_4_8030001	chrX_8030001	RAL-882
1838	chrX	8922325	8922363	chrX	8922759	8922796	jockey	10	430	1.0	1.0	1.0	5.0	471	chrX	8922325	intron	rdgA +	chrX	8922560	intron	rdgA +	chrX	8922796	intron	rdgA +	chrX_10_8920001	chrX_8920001	RAL-882
1839	chrX	8948756	8948779	chrX	8956266	8956289	roo	5	7510	2.5	1.0	1.8	1.8	7533	chrX	8948756	intron	rdgA +	chrX	8952522	intron	rdgA +	chrX	8956289	intron	rdgA +	chrX_5_8950001	chrX_8950001	RAL-882
1845	chrX	9508135	9508166	chrX	9509653	9509684	jockey	11	1515	1.0	2.5	1.8	3.9	1549	chrX	9508135	intron	CG32700 -	chrX	9508910	intron	CG32700 -	chrX	9509684	intron	CG32700 -	chrX_11_9505001	chrX_9505001	RAL-882
1846	chrX	9575799	9575823	chrX	9576113	9576144	mdg3	10	317	4.0	4.0	4.0	2.0	345	chrX	9575799	intron,exon	CG32699 -,CG42395 -	chrX	9575972	intron,intron	CG32699 -,CG42395 -	chrX	9576144	intron,5` UTR	CG32699 -,CG42395 -	chrX_10_9575001	chrX_9575001	RAL-882
1851	chrX	10138223	10138246	chrX	10145726	10145750	412	9	7504	3.5	2.5	3.0	2.2	7527	chrX	10138223	intron,intron	RhoU +,CR44894 -	chrX	10141986	intron,intron	RhoU +,CR44894 -	chrX	10145750	intron,intron	RhoU +,CR44894 -	chrX_9_10140001	chrX_10140001	RAL-882
1857	chrX	10550852	10550880	chrX	10552319	10552347	hobo	11	1466	3.5	3.0	3.2	2.6	1495	chrX	10550852	intron	spri -	chrX	10551600	intron	spri -	chrX	10552347	intron	spri -	chrX_11_10550001	chrX_10550001	RAL-882
1858	chrX	10686049	10686080	chrX	10691186	10691216	roo	6	5137	4.0	2.0	3.0	1.5	5167	chrX	10686049	intron	X11Lbeta +	chrX	10688632	intron	X11Lbeta +	chrX	10691216	intron	X11Lbeta +	chrX_6_10685001	chrX_10685001	RAL-882
1859	chrX	10772682	10772690	chrX	10772764	10772765	Tirant	4	80	4.5	2.0	3.2	1.0	83	chrX	10772682	intron	CG15211 +	chrX	10772724	intron	CG15211 +	chrX	10772765	intron	CG15211 +	chrX_4_10770001	chrX_10770001	RAL-882
1862	chrX	11194452	11194458	chrX	11201854	11201875	gypsy5	4	7408	0.5	4.5	2.5	1.1	7423	chrX	11194452	intergenic	not near genes	chrX	11198164	intergenic	not near genes	chrX	11201875	intergenic	CG11106 +	chrX_4_11195001	chrX_11195001	RAL-882
1863	chrX	11268577	11268596	chrX	11270056	11270085	hopper2	5	1489	3.0	3.0	3.0	1.2	1508	chrX	11268577	intron	CG44422 -	chrX	11269331	intron	CG44422 -	chrX	11270085	intron	CG44422 -	chrX_5_11265001	chrX_11265001	RAL-882
1864	chrX	11312064	11312092	chrX	11319409	11319444	Stalker2	12	7350	0.5	1.5	1.0	6.0	7380	chrX	11312064	intergenic	not near genes	chrX	11315754	intergenic	not near genes	chrX	11319444	intergenic	not near genes	chrX_12_11315001	chrX_11315001	RAL-882
1868	chrX	11633420	11633448	chrX	11640474	11640501	297	11	7054	0.5	0.5	0.5	7.3	7081	chrX	11633420	intron	Ptp10D +	chrX	11636960	intron	Ptp10D +	chrX	11640501	intron	Ptp10D +	chrX_11_11635001	chrX_11635001	RAL-882
1874	chrX	12168144	12168160	chrX	12173572	12173602	I-element	4	5438	3.0	3.0	3.0	1.0	5458	chrX	12168144	intron	Ten-a +	chrX	12170873	intron	Ten-a +	chrX	12173602	intron	Ten-a +	chrX_4_12170001	chrX_12170001	RAL-882
1881	chrX	12930598	12930609	chrX	12937712	12937721	HMS-Beagle	4	7114	2.0	4.5	3.2	1.0	7123	chrX	12930598	intron	fne +	chrX	12934160	intron	fne +	chrX	12937721	intron	fne +	chrX_4_12930001	chrX_12930001	RAL-882
1887	chrX	13429461	13429490	chrX	13430610	13430639	jockey	8	1149	4.5	4.5	4.5	1.5	1178	chrX	13429461	intergenic	not near genes	chrX	13430050	intergenic	not near genes	chrX	13430639	intergenic	not near genes	chrX_8_13430001	chrX_13430001	RAL-882
1892	chrX	13937989	13938011	chrX	13941260	13941282	I-element	5	3271	2.5	2.0	2.2	1.6	3293	chrX	13937989	intron	mamo -	chrX	13939636	intron	mamo -	chrX	13941282	intron	mamo -	chrX_5_13935001	chrX_13935001	RAL-882
1895	chrX	14105020	14105054	chrX	14114171	14114183	roo	7	9142	4.0	1.0	2.5	2.0	9163	chrX	14105020	intergenic	not near genes	chrX	14109602	intergenic	not near genes	chrX	14114183	5` UTR	CR44657 +	chrX_7_14105001	chrX_14105001	RAL-882
1897	chrX	14157600	14157619	chrX	14163257	14163276	297	6	5657	2.0	2.0	2.0	2.0	5676	chrX	14157600	intergenic	not near genes	chrX	14160438	intergenic	not near genes	chrX	14163276	intergenic	not near genes	chrX_6_14160001	chrX_14160001	RAL-882
1899	chrX	14416307	14416320	chrX	14421074	14421087	F-element	4	4767	1.0	1.5	1.2	1.8	4780	chrX	14416307	intron	dpr8 +	chrX	14418697	intron	dpr8 +	chrX	14421087	intron	dpr8 +	chrX_4_14415001	chrX_14415001	RAL-882
1902	chrX	14636463	14636490	chrX	14641903	14641931	I-element	7	5438	3.0	1.5	2.2	2.2	5468	chrX	14636463	intron	NetA -	chrX	14639197	intron	NetA -	chrX	14641931	intron	NetA -	chrX_7_14635001	chrX_14635001	RAL-882
1904	chrX	14818762	14818797	chrX	14823966	14823971	copia	8	5191	3.0	2.0	2.5	2.3	5209	chrX	14818762	intron	rut -	chrX	14821366	intron	rut -	chrX	14823971	intron	rut -	chrX_8_14820001	chrX_14820001	RAL-882
1907	chrX	14936862	14936883	chrX	14946119	14946140	roo	4	9257	1.5	0.5	1.0	2.0	9278	chrX	14936862	intron	pdgy -	chrX	14941501	intron	pdgy -	chrX	14946140	intron	pdgy -	chrX_4_14940001	chrX_14940001	RAL-882
1909	chrX	15413052	15413076	chrX	15417354	15417378	Juan	10	4300	5.0	4.5	4.8	1.7	4326	chrX	15413052	intron	Cngl -	chrX	15415215	intron	Cngl -	chrX	15417378	intron	Cngl -	chrX_10_15415001	chrX_15415001	RAL-882
1910	chrX	15421920	15421940	chrX	15423431	15423447	pogo	6	1510	3.0	1.5	2.2	1.9	1527	chrX	15421920	intron	Cngl -	chrX	15422684	intron	Cngl -	chrX	15423447	intron	Cngl -	chrX_6_15420001	chrX_15420001	RAL-882
1911	chrX	15435689	15435699	chrX	15436115	15436123	rover	4	428	0.0	4.5	2.2	1.2	434	chrX	15435689	intron	Cngl -	chrX	15435906	intron	Cngl -	chrX	15436123	intron	Cngl -	chrX_4_15435001	chrX_15435001	RAL-882
1916	chrX	16492644	16492679	chrX	16498221	16498256	mdg3	6	5576	2.5	2.0	2.2	1.9	5612	chrX	16492644	intron	para -	chrX	16495450	intron	para -	chrX	16498256	intron	para -	chrX_6_16495001	chrX_16495001	RAL-882
1938	chrX	18429499	18429527	chrX	18434807	18434830	Transpac	9	5310	1.5	1.5	1.5	3.6	5331	chrX	18429499	intergenic	not near genes	chrX	18432164	intergenic	not near genes	chrX	18434830	intergenic	not near genes	chrX_9_18430001	chrX_18430001	RAL-882
1946	chrX	19060411	19060428	chrX	19065195	19065212	Doc	6	4784	4.5	1.0	2.8	1.6	4801	chrX	19060411	intron	CG14190 +	chrX	19062812	intron	CG14190 +	chrX	19065212	intron	CG14190 +	chrX_6_19060001	chrX_19060001	RAL-882
1950	chrX	19136565	19136582	chrX	19143474	19143501	412	4	6917	2.0	3.0	2.5	1.1	6936	chrX	19136565	intergenic	not near genes	chrX	19140033	intergenic	not near genes	chrX	19143501	3` UTR	RhoGAP18B -	chrX_4_19140001	chrX_19140001	RAL-882
1952	chrX	19356990	19357017	chrX	19358431	19358458	NOF	5	1441	2.0	0.0	1.0	2.5	1468	chrX	19356990	intron	kek5 +	chrX	19357724	intron	kek5 +	chrX	19358458	intron	kek5 +	chrX_5_19355001	chrX_19355001	RAL-882
1953	chrX	19380160	19380180	chrX	19380401	19380421	pogo	7	241	3.5	0.5	2.0	2.3	261	chrX	19380160	intron	kek5 +	chrX	19380290	intron	kek5 +	chrX	19380421	intron	kek5 +	chrX_7_19380001	chrX_19380001	RAL-882
1955	chrX	19472121	19472158	chrX	19472691	19472727	jockey	16	568	1.5	4.5	3.0	4.0	606	chrX	19472121	intergenic	kek5 +	chrX	19472424	intergenic	not near genes	chrX	19472727	intergenic	not near genes	chrX_16_19470001	chrX_19470001	RAL-882
1959	chrX	19710073	19710103	chrX	19711859	19711889	S-element	7	1784	0.5	3.5	2.0	2.3	1816	chrX	19710073	intron	meso18E -	chrX	19710981	intron	meso18E -	chrX	19711889	intron	meso18E -	chrX_7_19710001	chrX_19710001	RAL-882
1970	chrX	20377325	20377347	chrX	20378790	20378809	hobo	10	1466	2.0	4.0	3.0	2.5	1484	chrX	20377325	intergenic	not near genes	chrX	20378067	intergenic	not near genes	chrX	20378809	intergenic	not near genes	chrX_10_20375001	chrX_20375001	RAL-882
1977	chrX	20940717	20940753	chrX	20942186	20942222	hobo	8	1466	2.5	2.5	2.5	2.3	1505	chrX	20940717	intergenic	not near genes	chrX	20941470	intergenic	not near genes	chrX	20942222	intergenic	not near genes	chrX_8_20940001	chrX_20940001	RAL-882
1979	chrX	21086128	21086161	chrX	21087157	21087190	jockey	7	1029	4.5	2.5	3.5	1.6	1062	chrX	21086128	intergenic	not near genes	chrX	21086659	intergenic	not near genes	chrX	21087190	intergenic	not near genes	chrX_7_21085001	chrX_21085001	RAL-882
1984	chrX	21458693	21458723	chrX	21464129	21464159	Ivk	5	5436	1.0	1.5	1.2	2.3	5466	chrX	21458693	intergenic	not near genes	chrX	21461426	intergenic	not near genes	chrX	21464159	intergenic	not near genes	chrX_5_21460001	chrX_21460001	RAL-882
1986	chrX	21474403	21474428	chrX	21474768	21474793	1731	8	365	4.0	1.5	2.8	2.1	390	chrX	21474403	intergenic	not near genes	chrX	21474598	intergenic	not near genes	chrX	21474793	intergenic	not near genes	chrX_8_21470001	chrX_21470001	RAL-882
1993	chrX	22697507	22697521	chrX	22701787	22701802	Juan	5	4287	6.0	4.0	5.0	0.8	4295	chrX	22697507	intron	CR44997 +	chrX	22699654	intron	CR44997 +	chrX	22701802	intron	CR44997 +	chrX_5_22695001	chrX_22695001	RAL-882
1994	chrX	22771507	22771536	chrX	22774797	22774827	297	6	3290	2.0	4.0	3.0	1.5	3320	chrX	22771507	intron	CR44997 +	chrX	22773167	intron	CR44997 +	chrX	22774827	intron	CR44997 +	chrX_6_22770001	chrX_22770001	RAL-882
1998	chrX	22987107	22987132	chrX	22989766	22989791	Burdock	4	2658	0.5	1.5	1.0	2.0	2684	chrX	22987107	intron,intron	stnA -,stnB -	chrX	22988449	intron,intron	stnA -,stnB -	chrX	22989791	intron,intron	stnA -,stnB -	chrX_4_22985001	chrX_22985001	RAL-882
1999	chrX	22996309	22996328	chrX	23003543	23003562	roo	7	7233	3.0	4.0	3.5	1.6	7253	chrX	22996309	intron,intron	stnA -,stnB -	chrX	22999936	intron,intron	stnA -,stnB -	chrX	23003562	intron,intron	stnA -,stnB -	chrX_7_22995001	chrX_22995001	RAL-882