SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 46320 46377 chr2L 46447 46505 14 128 12.0 11.0 11.5 1.1 185 chr2L 46320 intron Cda5 - chr2L 46412 intron Cda5 - chr2L 46505 intron Cda5 - chr2L_14_45001 chr2L_45001 RAL-853_125b 2 chr2L 47424 47470 chr2L 52578 52625 jockey 19 5152 17.0 12.5 14.8 1.2 5201 chr2L 47424 intron Cda5 - chr2L 50024 intron Cda5 - chr2L 52625 intron Cda5 - chr2L_19_50001 chr2L_50001 RAL-853_125b 3 chr2L 62027 62094 chr2L 62234 62301 16 209 39.5 44.0 41.8 0.4 274 chr2L 62027 intron Cda5 - chr2L 62164 intron Cda5 - chr2L 62301 intron Cda5 - chr2L_16_60001 chr2L_60001 RAL-853_125b 4 chr2L 79788 79860 chr2L 80182 80254 23 393 20.5 21.5 21.0 1.0 466 chr2L 79788 intergenic not near genes chr2L 80021 intergenic not near genes chr2L 80254 intergenic not near genes chr2L_23_80001 chr2L_80001 RAL-853_125b 5 chr2L 89676 89737 chr2L 89797 89864 16 125 19.0 21.0 20.0 0.8 188 chr2L 89676 intergenic not near genes chr2L 89770 intergenic not near genes chr2L 89864 intergenic not near genes chr2L_16_85001 chr2L_85001 RAL-853_125b 6 chr2L 172016 172066 chr2L 172147 172197 4 131 17.5 12.5 15.0 0.2 181 chr2L 172016 intron spen + chr2L 172106 intron spen + chr2L 172197 intron spen + chr2L_4_170001 chr2L_170001 RAL-853_125b 7 chr2L 263278 263312 chr2L 263474 263508 7 196 13.5 23.0 18.2 0.4 230 chr2L 263278 intron,3` UTR CG3645 -,CG17075 - chr2L 263393 intron,3` UTR CG3645 -,CG17075 - chr2L 263508 intron,3` UTR CG3645 -,CG17075 - chr2L_7_260001 chr2L_260001 RAL-853_125b 8 chr2L 276552 276562 chr2L 276685 276695 4 133 12.0 27.5 19.8 0.2 143 chr2L 276552 intron CG17078 - chr2L 276624 intron CG17078 - chr2L 276695 intron CG17078 - chr2L_4_275001 chr2L_275001 RAL-853_125b 9 chr2L 297645 297701 chr2L 297795 297851 11 147 21.0 15.0 18.0 0.6 206 chr2L 297645 intergenic Hop +,Pi3K21B + chr2L 297748 intergenic Pi3K21B +,Hop + chr2L 297851 intergenic Pi3K21B +,Hop + chr2L_11_295001 chr2L_295001 RAL-853_125b 10 chr2L 325097 325119 chr2L 325224 325245 12 124 13.5 8.5 11.0 1.0 148 chr2L 325097 intron Plc21C + chr2L 325171 intron Plc21C + chr2L 325245 intron Plc21C + chr2L_12_325001 chr2L_325001 RAL-853_125b 11 chr2L 325125 325144 chr2L 325216 325271 9 118 11.0 8.0 9.5 0.9 146 chr2L 325125 intron Plc21C + chr2L 325198 intron Plc21C + chr2L 325271 intron Plc21C + chr2L_9_325001 chr2L_325001 RAL-853_125b 12 chr2L 347845 347910 chr2L 355395 355460 blood 30 7548 10.0 6.5 8.2 3.3 7615 chr2L 347845 3` UTR Plc21C + chr2L 351652 intron Plc21C + chr2L 355460 3` UTR Plc21C + chr2L_30_350001 chr2L_350001 RAL-853_125b 13 chr2L 371403 371448 chr2L 371531 371577 12 129 7.5 11.0 9.2 1.2 174 chr2L 371403 intergenic not near genes chr2L 371490 intergenic not near genes chr2L 371577 intergenic not near genes chr2L_12_370001 chr2L_370001 RAL-853_125b 14 chr2L 407907 407972 chr2L 408038 408103 15 131 14.0 16.5 15.2 0.9 196 chr2L 407907 3` UTR RpI135 + chr2L 408005 intergenic AP-2alpha -,RpI135 + chr2L 408103 3` UTR AP-2alpha - chr2L_15_405001 chr2L_405001 RAL-853_125b 15 chr2L 428063 428093 chr2L 428179 428198 5 118 21.5 26.0 23.8 0.2 135 chr2L 428063 intergenic not near genes chr2L 428130 intergenic not near genes chr2L 428198 intergenic not near genes chr2L_5_425001 chr2L_425001 RAL-853_125b 16 chr2L 467329 467342 chr2L 467478 467491 7 149 33.0 17.5 25.2 0.3 162 chr2L 467329 intron CG4297 - chr2L 467410 intron CG4297 - chr2L 467491 intron CG4297 - chr2L_7_465001 chr2L_465001 RAL-853_125b 17 chr2L 467367 467484 chr2L 467552 467623 17 150 17.5 18.5 18.0 0.9 256 chr2L 467367 intron CG4297 - chr2L 467495 intron CG4297 - chr2L 467623 intron CG4297 - chr2L_17_465001 chr2L_465001 RAL-853_125b 18 chr2L 609253 609290 chr2L 609419 609456 7 162 29.5 27.5 28.5 0.2 203 chr2L 609253 intergenic CR43649 - chr2L 609354 intergenic CR43649 - chr2L 609456 intergenic CR43649 - chr2L_7_605001 chr2L_605001 RAL-853_125b 19 chr2L 630395 630474 chr2L 630531 630539 11 129 26.0 27.0 26.5 0.4 144 chr2L 630395 intergenic not near genes chr2L 630467 intergenic not near genes chr2L 630539 intergenic not near genes chr2L_11_630001 chr2L_630001 RAL-853_125b 20 chr2L 664182 664188 chr2L 664292 664308 5 119 25.0 16.5 20.8 0.2 126 chr2L 664182 intron ds - chr2L 664245 intron ds - chr2L 664308 intron ds - chr2L_5_660001 chr2L_660001 RAL-853_125b 21 chr2L 664189 664221 chr2L 664291 664353 9 114 22.5 16.0 19.2 0.4 164 chr2L 664189 intron ds - chr2L 664271 intron ds - chr2L 664353 intron ds - chr2L_9_660001 chr2L_660001 RAL-853_125b 22 chr2L 666233 666308 chr2L 666359 666453 22 132 10.0 7.5 8.8 2.2 220 chr2L 666233 intron ds - chr2L 666343 intron ds - chr2L 666453 intron ds - chr2L_22_665001 chr2L_665001 RAL-853_125b 23 chr2L 686922 686930 chr2L 696001 696020 roo 5 9088 9.0 12.5 10.8 0.4 9098 chr2L 686922 intron ds - chr2L 691471 intron ds - chr2L 696020 intron ds - chr2L_5_690001 chr2L_690001 RAL-853_125b 24 chr2L 686931 686941 chr2L 695996 696026 roo 5 9084 8.5 12.5 10.5 0.4 9095 chr2L 686931 intron ds - chr2L 691478 intron ds - chr2L 696026 intron ds - chr2L_5_690001 chr2L_690001 RAL-853_125b 25 chr2L 721181 721188 chr2L 721444 721451 5 263 18.5 10.0 14.2 0.3 270 chr2L 721181 intergenic not near genes chr2L 721316 intergenic not near genes chr2L 721451 intergenic not near genes chr2L_5_720001 chr2L_720001 RAL-853_125b 26 chr2L 736839 736902 chr2L 736994 737057 11 153 28.5 30.0 29.2 0.4 218 chr2L 736839 intergenic Eaat2 - chr2L 736948 intergenic Eaat2 - chr2L 737057 intergenic Eaat2 - chr2L_11_735001 chr2L_735001 RAL-853_125b 27 chr2L 764506 764577 chr2L 764656 764726 13 148 16.5 24.0 20.2 0.6 220 chr2L 764506 intergenic not near genes chr2L 764616 intergenic not near genes chr2L 764726 intergenic not near genes chr2L_13_760001 chr2L_760001 RAL-853_125b 28 chr2L 770420 770481 chr2L 772251 772312 Bari1 22 1829 12.0 11.0 11.5 1.8 1892 chr2L 770420 intergenic not near genes chr2L 771366 intergenic not near genes chr2L 772312 intergenic CR44614 + chr2L_22_770001 chr2L_770001 RAL-853_125b 29 chr2L 849423 849486 chr2L 849564 849627 14 141 21.0 17.0 19.0 0.7 204 chr2L 849423 intron drongo - chr2L 849525 intron drongo - chr2L 849627 intron drongo - chr2L_14_845001 chr2L_845001 RAL-853_125b 30 chr2L 877800 877878 chr2L 877931 877982 5 117 29.0 24.5 26.8 0.2 182 chr2L 877800 3` UTR,exon CG15824 -,ninaA + chr2L 877891 3` UTR,intron CG15824 -,ninaA + chr2L 877982 3` UTR,exon CG15824 -,ninaA + chr2L_5_875001 chr2L_875001 RAL-853_125b 31 chr2L 931592 931660 chr2L 931720 931767 6 125 25.5 25.5 25.5 0.2 175 chr2L 931592 intron CG4341 + chr2L 931680 intron CG4341 + chr2L 931767 intron CG4341 + chr2L_6_930001 chr2L_930001 RAL-853_125b 32 chr2L 936537 936547 chr2L 936677 936687 4 140 16.0 3.0 9.5 0.4 150 chr2L 936537 intron CG4341 + chr2L 936612 intron CG4341 + chr2L 936687 intron CG4341 + chr2L_4_935001 chr2L_935001 RAL-853_125b 33 chr2L 948831 948902 chr2L 949100 949171 6 269 29.5 22.5 26.0 0.2 340 chr2L 948831 intron CG4341 + chr2L 949001 intron CG4341 + chr2L 949171 intron CG4341 + chr2L_6_945001 chr2L_945001 RAL-853_125b 34 chr2L 964536 964571 chr2L 964670 964705 5 134 21.0 28.5 24.8 0.2 169 chr2L 964536 intergenic not near genes chr2L 964620 intergenic not near genes chr2L 964705 intergenic not near genes chr2L_5_960001 chr2L_960001 RAL-853_125b 35 chr2L 976834 976904 chr2L 984520 984590 roo 20 7686 6.5 10.0 8.2 2.2 7756 chr2L 976834 intergenic not near genes chr2L 980712 intergenic not near genes chr2L 984590 intergenic not near genes chr2L_20_980001 chr2L_980001 RAL-853_125b 36 chr2L 996673 996721 chr2L 1005818 1005866 roo 10 9145 8.0 5.0 6.5 1.3 9193 chr2L 996673 intergenic not near genes chr2L 1001270 intergenic not near genes chr2L 1005866 intergenic not near genes chr2L_10_1000001 chr2L_1000001 RAL-853_125b 37 chr2L 1025075 1025120 chr2L 1025205 1025250 12 124 12.0 14.5 13.2 0.8 175 chr2L 1025075 intron IA-2 - chr2L 1025162 intron IA-2 - chr2L 1025250 intron IA-2 - chr2L_12_1025001 chr2L_1025001 RAL-853_125b 38 chr2L 1036411 1036470 chr2L 1036550 1036596 8 136 20.0 10.0 15.0 0.5 185 chr2L 1036411 intron IA-2 - chr2L 1036504 intron IA-2 - chr2L 1036596 intron IA-2 - chr2L_8_1035001 chr2L_1035001 RAL-853_125b 39 chr2L 1042576 1042632 chr2L 1042703 1042759 8 127 3.0 0.0 1.5 3.2 183 chr2L 1042576 intron IA-2 - chr2L 1042668 intron IA-2 - chr2L 1042759 intron IA-2 - chr2L_8_1040001 chr2L_1040001 RAL-853_125b 40 chr2L 1066047 1066122 chr2L 1066178 1066225 21 127 32.0 26.0 29.0 0.7 178 chr2L 1066047 intron S - chr2L 1066136 intron S - chr2L 1066225 intron S - chr2L_21_1065001 chr2L_1065001 RAL-853_125b 41 chr2L 1094212 1094238 chr2L 1094338 1094364 10 126 20.0 12.0 16.0 0.6 152 chr2L 1094212 intron CG4629 - chr2L 1094288 intron CG4629 - chr2L 1094364 intron CG4629 - chr2L_10_1090001 chr2L_1090001 RAL-853_125b 42 chr2L 1137609 1137680 chr2L 1137839 1137910 23 228 19.0 24.5 21.8 1.0 301 chr2L 1137609 intron CG4577 + chr2L 1137760 intron CG4577 + chr2L 1137910 intron CG4577 + chr2L_23_1135001 chr2L_1135001 RAL-853_125b 43 chr2L 1156816 1156890 chr2L 1156970 1157045 18 154 7.5 6.0 6.8 2.3 229 chr2L 1156816 intron capt - chr2L 1156930 intron capt - chr2L 1157045 intron capt - chr2L_18_1155001 chr2L_1155001 RAL-853_125b 44 chr2L 1164209 1164275 chr2L 1164345 1164411 9 136 23.0 22.5 22.8 0.4 202 chr2L 1164209 intergenic IntS14 +,CG5080 - chr2L 1164310 intergenic IntS14 +,CG5080 - chr2L 1164411 intergenic IntS14 + chr2L_9_1160001 chr2L_1160001 RAL-853_125b 45 chr2L 1178628 1178704 chr2L 1178762 1178838 14 132 33.0 31.5 32.2 0.4 210 chr2L 1178628 intron CG4896 + chr2L 1178733 intron CG4896 + chr2L 1178838 intron CG4896 + chr2L_14_1175001 chr2L_1175001 RAL-853_125b 46 chr2L 1199821 1199866 chr2L 1199979 1200024 6 158 0.5 11.5 6.0 0.9 203 chr2L 1199821 3` UTR CG43348 + chr2L 1199922 3` UTR CG43348 + chr2L 1200024 intergenic CG43348 +,CG43349 + chr2L_6_1195001 chr2L_1195001 RAL-853_125b 47 chr2L 1220097 1220157 chr2L 1227602 1227673 blood 24 7516 10.0 9.5 9.8 2.2 7576 chr2L 1220097 intron CG42329 + chr2L 1223885 intron CG42329 + chr2L 1227673 intron CG42329 + chr2L_24_1220001 chr2L_1220001 RAL-853_125b 48 chr2L 1227829 1227866 chr2L 1227927 1227977 12 123 30.5 34.0 32.2 0.4 148 chr2L 1227829 exon CG42329 + chr2L 1227903 exon CG42329 + chr2L 1227977 exon CG42329 + chr2L_12_1225001 chr2L_1225001 RAL-853_125b 49 chr2L 1237937 1238003 chr2L 1238071 1238121 7 134 16.0 12.5 14.2 0.5 184 chr2L 1237937 intergenic not near genes chr2L 1238029 intergenic not near genes chr2L 1238121 intergenic not near genes chr2L_7_1235001 chr2L_1235001 RAL-853_125b 50 chr2L 1244366 1244427 chr2L 1244493 1244554 17 127 13.5 17.5 15.5 1.0 188 chr2L 1244366 intergenic not near genes chr2L 1244460 intergenic not near genes chr2L 1244554 intergenic not near genes chr2L_17_1240001 chr2L_1240001 RAL-853_125b 51 chr2L 1261081 1261257 chr2L 1261212 1261387 15 129 0.0 0.0 0.0 15.0 306 chr2L 1261081 intron robo3 + chr2L 1261234 intron robo3 + chr2L 1261387 intron robo3 + chr2L_15_1260001 chr2L_1260001 RAL-853_125b 52 chr2L 1321978 1322050 chr2L 1322117 1322189 8 139 19.5 28.0 23.8 0.3 211 chr2L 1321978 intergenic not near genes chr2L 1322084 intergenic not near genes chr2L 1322189 intergenic not near genes chr2L_8_1320001 chr2L_1320001 RAL-853_125b 53 chr2L 1407927 1407957 chr2L 1408070 1408105 8 147 26.5 20.5 23.5 0.3 178 chr2L 1407927 intron lea - chr2L 1408016 intron lea - chr2L 1408105 intron lea - chr2L_8_1405001 chr2L_1405001 RAL-853_125b 54 chr2L 1443279 1443353 chr2L 1443421 1443483 6 134 14.0 19.0 16.5 0.3 204 chr2L 1443279 exon CG43402 + chr2L 1443381 3` UTR CG43402 + chr2L 1443483 3` UTR CG43402 + chr2L_6_1440001 chr2L_1440001 RAL-853_125b 55 chr2L 1503396 1503450 chr2L 1503524 1503578 23 128 18.5 20.5 19.5 1.1 182 chr2L 1503396 intron CR44064 + chr2L 1503487 intron CR44064 + chr2L 1503578 5` UTR CR44064 + chr2L_23_1500001 chr2L_1500001 RAL-853_125b 56 chr2L 1529059 1529086 chr2L 1529200 1529227 10 141 17.0 13.5 15.2 0.6 168 chr2L 1529059 intergenic not near genes chr2L 1529143 intergenic not near genes chr2L 1529227 intergenic not near genes chr2L_10_1525001 chr2L_1525001 RAL-853_125b 57 chr2L 1552625 1552689 chr2L 1552896 1552960 6 271 25.0 0.5 12.8 0.4 335 chr2L 1552625 intergenic not near genes chr2L 1552792 intergenic not near genes chr2L 1552960 intergenic not near genes chr2L_6_1550001 chr2L_1550001 RAL-853_125b 58 chr2L 1556974 1557014 chr2L 1557117 1557157 5 143 21.5 21.5 21.5 0.2 183 chr2L 1556974 intron haf + chr2L 1557066 intron haf + chr2L 1557157 intron haf + chr2L_5_1555001 chr2L_1555001 RAL-853_125b 59 chr2L 1570646 1570714 chr2L 1573568 1573636 F-element 27 2922 10.5 9.5 10.0 2.5 2990 chr2L 1570646 intron haf + chr2L 1572141 intron haf + chr2L 1573636 intron haf + chr2L_27_1570001 chr2L_1570001 RAL-853_125b 60 chr2L 1580263 1580329 chr2L 1580521 1580587 8 258 13.0 13.5 13.2 0.6 324 chr2L 1580263 intron haf + chr2L 1580425 intron haf + chr2L 1580587 intron haf + chr2L_8_1580001 chr2L_1580001 RAL-853_125b 61 chr2L 1590919 1590980 chr2L 1591045 1591105 14 121 28.5 26.5 27.5 0.5 186 chr2L 1590919 intron haf + chr2L 1591012 intron haf + chr2L 1591105 intron haf + chr2L_14_1590001 chr2L_1590001 RAL-853_125b 62 chr2L 1591822 1591886 chr2L 1591956 1592019 6 134 20.0 18.0 19.0 0.3 197 chr2L 1591822 intron haf + chr2L 1591920 intron haf + chr2L 1592019 intron haf + chr2L_6_1590001 chr2L_1590001 RAL-853_125b 63 chr2L 1615339 1615377 chr2L 1615472 1615509 7 133 32.5 31.5 32.0 0.2 170 chr2L 1615339 intergenic not near genes chr2L 1615424 intergenic not near genes chr2L 1615509 intergenic not near genes chr2L_7_1615001 chr2L_1615001 RAL-853_125b 64 chr2L 1628795 1628810 chr2L 1628934 1628949 4 138 19.0 17.5 18.2 0.2 154 chr2L 1628795 intergenic not near genes chr2L 1628872 intergenic not near genes chr2L 1628949 intergenic not near genes chr2L_4_1625001 chr2L_1625001 RAL-853_125b 65 chr2L 1634721 1634764 chr2L 1634856 1634899 10 135 8.5 13.0 10.8 0.8 178 chr2L 1634721 intergenic not near genes chr2L 1634810 intergenic not near genes chr2L 1634899 intergenic not near genes chr2L_10_1630001 chr2L_1630001 RAL-853_125b 66 chr2L 1635347 1635429 chr2L 1635532 1635615 9 186 7.0 15.0 11.0 0.8 268 chr2L 1635347 intergenic not near genes chr2L 1635481 intergenic not near genes chr2L 1635615 intergenic not near genes chr2L_9_1635001 chr2L_1635001 RAL-853_125b 67 chr2L 1661971 1662034 chr2L 1662106 1662177 16 137 3.0 2.0 2.5 4.6 206 chr2L 1661971 intron chinmo + chr2L 1662074 intron chinmo + chr2L 1662177 intron chinmo + chr2L_16_1660001 chr2L_1660001 RAL-853_125b 68 chr2L 1669114 1669160 chr2L 1669378 1669424 8 264 4.0 13.5 8.8 0.8 310 chr2L 1669114 intron chinmo + chr2L 1669269 intron chinmo + chr2L 1669424 intron chinmo + chr2L_8_1665001 chr2L_1665001 RAL-853_125b 69 chr2L 1678933 1678998 chr2L 1686448 1686513 blood 23 7515 5.0 10.0 7.5 2.7 7580 chr2L 1678933 intron chinmo + chr2L 1682723 intron chinmo + chr2L 1686513 intron chinmo + chr2L_23_1680001 chr2L_1680001 RAL-853_125b 70 chr2L 1711316 1711380 chr2L 1711690 1711754 mdg3 37 371 13.5 11.5 12.5 2.7 438 chr2L 1711316 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711535 3` UTR frtz - chr2L 1711754 exon frtz - chr2L_37_1710001 chr2L_1710001 RAL-853_125b 71 chr2L 1721809 1721829 chr2L 1721943 1721963 7 133 0.0 13.0 6.5 0.9 154 chr2L 1721809 intron Rim2 - chr2L 1721886 intron Rim2 - chr2L 1721963 intron Rim2 - chr2L_7_1720001 chr2L_1720001 RAL-853_125b 72 chr2L 1721835 1721853 chr2L 1721928 1721979 9 116 0.0 10.5 5.2 1.5 144 chr2L 1721835 intron Rim2 - chr2L 1721907 intron Rim2 - chr2L 1721979 intron Rim2 - chr2L_9_1720001 chr2L_1720001 RAL-853_125b 73 chr2L 1724764 1724825 chr2L 1724896 1724957 9 132 27.0 28.0 27.5 0.3 193 chr2L 1724764 intergenic Eno -,Rim2 - chr2L 1724860 3` UTR Eno - chr2L 1724957 3` UTR Eno - chr2L_9_1720001 chr2L_1720001 RAL-853_125b 74 chr2L 1850322 1850382 chr2L 1850452 1850512 12 130 20.0 13.5 16.8 0.7 190 chr2L 1850322 intron wry + chr2L 1850417 intron wry + chr2L 1850512 intron wry + chr2L_12_1850001 chr2L_1850001 RAL-853_125b 75 chr2L 1883366 1883447 chr2L 1883999 1884062 20 626 20.0 26.0 23.0 0.8 696 chr2L 1883366 intron CG15358 - chr2L 1883714 intron CG15358 - chr2L 1884062 intergenic CG15358 - chr2L_20_1880001 chr2L_1880001 RAL-853_125b 76 chr2L 1889777 1889848 chr2L 1890007 1890078 16 230 14.0 15.0 14.5 1.0 301 chr2L 1889777 intron CG7337 + chr2L 1889928 intron CG7337 + chr2L 1890078 intron CG7337 + chr2L_16_1885001 chr2L_1885001 RAL-853_125b 77 chr2L 1993155 1993224 chr2L 1993291 1993360 9 131 32.5 32.0 32.2 0.3 205 chr2L 1993155 intergenic not near genes chr2L 1993258 intergenic not near genes chr2L 1993360 intergenic not near genes chr2L_9_1990001 chr2L_1990001 RAL-853_125b 78 chr2L 1999509 1999579 chr2L 1999723 1999785 18 209 7.5 3.0 5.2 2.9 276 chr2L 1999509 intron CG33543 - chr2L 1999647 intron CG33543 - chr2L 1999785 intron CG33543 - chr2L_18_1995001 chr2L_1995001 RAL-853_125b 79 chr2L 2007833 2007873 chr2L 2007991 2008031 18 158 6.0 20.0 13.0 1.3 198 chr2L 2007833 intergenic CR45712 + chr2L 2007932 intergenic CR45712 +,Nplp4 + chr2L 2008031 intergenic CR45712 +,Nplp4 + chr2L_18_2005001 chr2L_2005001 RAL-853_125b 80 chr2L 2073303 2073355 chr2L 2073436 2073473 20 122 12.0 19.0 15.5 1.2 170 chr2L 2073303 intron dpr3 - chr2L 2073388 intron dpr3 - chr2L 2073473 intron dpr3 - chr2L_20_2070001 chr2L_2070001 RAL-853_125b 81 chr2L 2084391 2084422 chr2L 2085388 2085419 6 994 27.5 25.0 26.2 0.2 1028 chr2L 2084391 intron,5` UTR dpr3 -,CR44055 + chr2L 2084905 intron dpr3 - chr2L 2085419 intron dpr3 - chr2L_6_2080001 chr2L_2080001 RAL-853_125b 82 chr2L 2100377 2100380 chr2L 2109548 2109556 roo 4 9173 13.0 16.5 14.8 0.3 9179 chr2L 2100377 intron dpr3 - chr2L 2104966 intron dpr3 - chr2L 2109556 intron dpr3 - chr2L_4_2100001 chr2L_2100001 RAL-853_125b 83 chr2L 2100383 2100407 chr2L 2109531 2109551 roo 10 9164 8.0 12.5 10.2 0.9 9168 chr2L 2100383 intron dpr3 - chr2L 2104967 intron dpr3 - chr2L 2109551 intron dpr3 - chr2L_10_2100001 chr2L_2100001 RAL-853_125b 84 chr2L 2112071 2112142 chr2L 2119777 2119854 opus 12 7703 3.5 3.5 3.5 2.7 7783 chr2L 2112071 intergenic not near genes chr2L 2115962 intergenic not near genes chr2L 2119854 intergenic not near genes chr2L_12_2115001 chr2L_2115001 RAL-853_125b 85 chr2L 2145706 2145769 chr2L 2145842 2145905 20 136 25.5 26.5 26.0 0.7 199 chr2L 2145706 3` UTR CG11723 - chr2L 2145806 3` UTR CG11723 - chr2L 2145905 exon CG11723 - chr2L_20_2145001 chr2L_2145001 RAL-853_125b 86 chr2L 2160570 2160622 chr2L 2160710 2160762 6 140 28.5 28.5 28.5 0.2 192 chr2L 2160570 5` UTR aop - chr2L 2160666 intron aop - chr2L 2160762 intron aop - chr2L_6_2160001 chr2L_2160001 RAL-853_125b 87 chr2L 2222383 2222451 chr2L 2222519 2222583 17 135 19.5 15.5 17.5 0.9 200 chr2L 2222383 intron papi + chr2L 2222483 intron papi + chr2L 2222583 intron papi + chr2L_17_2220001 chr2L_2220001 RAL-853_125b 88 chr2L 2256401 2256457 chr2L 2256531 2256587 5 129 21.0 18.5 19.8 0.2 186 chr2L 2256401 intergenic not near genes chr2L 2256494 intergenic not near genes chr2L 2256587 intergenic not near genes chr2L_5_2255001 chr2L_2255001 RAL-853_125b 89 chr2L 2261661 2261693 chr2L 2261780 2261820 8 126 17.5 21.0 19.2 0.4 159 chr2L 2261661 intergenic not near genes chr2L 2261740 intergenic not near genes chr2L 2261820 intergenic not near genes chr2L_8_2260001 chr2L_2260001 RAL-853_125b 90 chr2L 2294023 2294069 chr2L 2299244 2299286 copia 17 5238 9.0 6.5 7.8 1.9 5263 chr2L 2294023 intergenic not near genes chr2L 2296654 intergenic not near genes chr2L 2299286 intergenic not near genes chr2L_17_2295001 chr2L_2295001 RAL-853_125b 91 chr2L 2317071 2317130 chr2L 2317292 2317351 14 221 45.5 40.0 42.8 0.3 280 chr2L 2317071 intron,intron CG9967 -,eys + chr2L 2317211 intron,intron CG9967 -,eys + chr2L 2317351 intron,intron CG9967 -,eys + chr2L_14_2315001 chr2L_2315001 RAL-853_125b 92 chr2L 2380421 2380444 chr2L 2380527 2380555 4 114 24.5 27.0 25.8 0.1 134 chr2L 2380421 3` UTR Atxn7 + chr2L 2380488 3` UTR Atxn7 + chr2L 2380555 intergenic Atxn7 + chr2L_4_2380001 chr2L_2380001 RAL-853_125b 93 chr2L 2392117 2392175 chr2L 2392277 2392328 7 159 9.5 11.5 10.5 0.6 211 chr2L 2392117 5` UTR VGlut + chr2L 2392222 intron VGlut + chr2L 2392328 intron VGlut + chr2L_7_2390001 chr2L_2390001 RAL-853_125b 94 chr2L 2402266 2402315 chr2L 2402427 2402476 14 160 16.5 11.5 14.0 0.9 210 chr2L 2402266 exon VGlut + chr2L 2402371 intron VGlut + chr2L 2402476 intron VGlut + chr2L_14_2400001 chr2L_2400001 RAL-853_125b 95 chr2L 2427332 2427377 chr2L 2427468 2427513 12 136 13.5 4.0 8.8 1.2 181 chr2L 2427332 3` UTR CR44912 - chr2L 2427422 3` UTR CR44912 - chr2L 2427513 3` UTR CR44912 - chr2L_12_2425001 chr2L_2425001 RAL-853_125b 96 chr2L 2439229 2439244 chr2L 2439356 2439360 9 125 31.5 22.5 27.0 0.3 131 chr2L 2439229 intron dpp + chr2L 2439294 intron dpp + chr2L 2439360 intron dpp + chr2L_9_2435001 chr2L_2435001 RAL-853_125b 97 chr2L 2439247 2439281 chr2L 2439350 2439408 14 121 28.0 25.5 26.8 0.5 161 chr2L 2439247 intron dpp + chr2L 2439328 intron dpp + chr2L 2439408 intron dpp + chr2L_14_2435001 chr2L_2435001 RAL-853_125b 98 chr2L 2495093 2495163 chr2L 2495220 2495290 21 125 19.0 23.0 21.0 1.0 197 chr2L 2495093 intron oaf + chr2L 2495192 intron oaf + chr2L 2495290 intron oaf + chr2L_21_2495001 chr2L_2495001 RAL-853_125b 99 chr2L 2497603 2497613 chr2L 2497729 2497739 4 126 3.5 9.5 6.5 0.5 136 chr2L 2497603 3` UTR oaf + chr2L 2497671 3` UTR oaf + chr2L 2497739 3` UTR oaf + chr2L_4_2495001 chr2L_2495001 RAL-853_125b 100 chr2L 2504182 2504234 chr2L 2504310 2504362 20 128 4.0 9.5 6.8 2.6 180 chr2L 2504182 intergenic not near genes chr2L 2504272 intergenic not near genes chr2L 2504362 intergenic not near genes chr2L_20_2500001 chr2L_2500001 RAL-853_125b 101 chr2L 2557834 2557844 chr2L 2557969 2557979 4 135 0.5 20.5 10.5 0.3 145 chr2L 2557834 intergenic not near genes chr2L 2557906 intergenic not near genes chr2L 2557979 intergenic not near genes chr2L_4_2555001 chr2L_2555001 RAL-853_125b 102 chr2L 2565497 2565561 chr2L 2571615 2571679 297 10 6119 9.0 11.5 10.2 0.9 6182 chr2L 2565497 exon Cyp309a2 - chr2L 2568588 intron Cyp309a2 - chr2L 2571679 exon Cyp309a2 - chr2L_10_2565001 chr2L_2565001 RAL-853_125b 103 chr2L 2617989 2618052 chr2L 2618118 2618175 30 128 11.0 6.5 8.8 3.1 186 chr2L 2617989 intergenic not near genes chr2L 2618082 intergenic not near genes chr2L 2618175 intergenic not near genes chr2L_30_2615001 chr2L_2615001 RAL-853_125b 104 chr2L 2661177 2661226 chr2L 2663039 2663109 I-element 18 1869 2.5 9.0 5.8 2.6 1932 chr2L 2661177 intergenic not near genes chr2L 2662143 intergenic not near genes chr2L 2663109 intergenic not near genes chr2L_18_2660001 chr2L_2660001 RAL-853_125b 105 chr2L 2672974 2673039 chr2L 2673286 2673336 15 311 1.5 1.0 1.2 6.8 362 chr2L 2672974 intergenic not near genes chr2L 2673155 intergenic not near genes chr2L 2673336 intergenic not near genes chr2L_15_2670001 chr2L_2670001 RAL-853_125b 106 chr2L 2679995 2680060 chr2L 2680141 2680206 17 146 10.0 5.5 7.8 1.9 211 chr2L 2679995 intron CG31690 + chr2L 2680100 intron CG31690 + chr2L 2680206 intron CG31690 + chr2L_17_2680001 chr2L_2680001 RAL-853_125b 107 chr2L 2698806 2698893 chr2L 2698954 2699030 25 137 0.5 6.5 3.5 5.6 224 chr2L 2698806 intron CG31690 + chr2L 2698918 intron CG31690 + chr2L 2699030 intron CG31690 + chr2L_25_2695001 chr2L_2695001 RAL-853_125b 108 chr2L 2702938 2702986 chr2L 2703189 2703208 21 243 7.0 8.0 7.5 2.5 270 chr2L 2702938 intron CG31690 + chr2L 2703073 intron CG31690 + chr2L 2703208 intron CG31690 + chr2L_21_2700001 chr2L_2700001 RAL-853_125b 109 chr2L 2772582 2772619 chr2L 2779216 2779253 297 10 6634 3.0 11.5 7.2 1.2 6671 chr2L 2772582 3` UTR Syt1 - chr2L 2775918 intron Syt1 - chr2L 2779253 3` UTR Syt1 - chr2L_10_2775001 chr2L_2775001 RAL-853_125b 110 chr2L 2780134 2780184 chr2L 2780273 2780323 20 139 17.5 11.0 14.2 1.3 189 chr2L 2780134 3` UTR Syt1 - chr2L 2780228 3` UTR Syt1 - chr2L 2780323 3` UTR Syt1 - chr2L_20_2780001 chr2L_2780001 RAL-853_125b 111 chr2L 2782880 2782929 chr2L 2782989 2783055 16 123 16.0 2.0 9.0 1.6 175 chr2L 2782880 intron Syt1 - chr2L 2782968 intron Syt1 - chr2L 2783055 3` UTR Syt1 - chr2L_16_2780001 chr2L_2780001 RAL-853_125b 112 chr2L 2793900 2793967 chr2L 2794030 2794096 24 127 7.0 10.0 8.5 2.5 196 chr2L 2793900 5` UTR Syt1 - chr2L 2793998 intron Syt1 - chr2L 2794096 intron Syt1 - chr2L_24_2790001 chr2L_2790001 RAL-853_125b 113 chr2L 2800558 2800613 chr2L 2800691 2800751 13 134 7.0 0.0 3.5 2.9 193 chr2L 2800558 intergenic not near genes chr2L 2800654 intergenic not near genes chr2L 2800751 intergenic not near genes chr2L_13_2800001 chr2L_2800001 RAL-853_125b 114 chr2L 2826493 2826571 chr2L 2826635 2826706 25 140 2.5 8.0 5.2 4.0 213 chr2L 2826493 intron Duox - chr2L 2826600 intron Duox - chr2L 2826706 intron Duox - chr2L_25_2825001 chr2L_2825001 RAL-853_125b 115 chr2L 2873434 2873441 chr2L 2873562 2873569 4 128 0.0 14.0 7.0 0.5 135 chr2L 2873434 intron CG31694 - chr2L 2873502 intron CG31694 - chr2L 2873569 intron CG31694 - chr2L_4_2870001 chr2L_2870001 RAL-853_125b 116 chr2L 2885323 2885390 chr2L 2885450 2885517 19 127 8.0 6.0 7.0 2.4 194 chr2L 2885323 intron NTPase - chr2L 2885420 intron NTPase - chr2L 2885517 intron NTPase - chr2L_19_2885001 chr2L_2885001 RAL-853_125b 117 chr2L 2894293 2894363 chr2L 2895030 2895075 44 730 13.0 13.5 13.2 3.1 782 chr2L 2894293 intron lilli + chr2L 2894684 intron lilli + chr2L 2895075 intron lilli + chr2L_44_2890001 chr2L_2890001 RAL-853_125b 118 chr2L 2915014 2915042 chr2L 2915156 2915164 4 134 8.5 10.0 9.2 0.4 150 chr2L 2915014 intron lilli + chr2L 2915089 intron lilli + chr2L 2915164 intron lilli + chr2L_4_2915001 chr2L_2915001 RAL-853_125b 119 chr2L 2933253 2933323 chr2L 2935480 2935550 pogo 21 2224 9.0 14.5 11.8 1.6 2297 chr2L 2933253 intron lilli + chr2L 2934402 intron lilli + chr2L 2935550 intron lilli + chr2L_21_2930001 chr2L_2930001 RAL-853_125b 120 chr2L 2937371 2937442 chr2L 2937499 2937569 28 126 13.0 6.5 9.8 2.6 198 chr2L 2937371 intron lilli + chr2L 2937470 intron lilli + chr2L 2937569 intron lilli + chr2L_28_2935001 chr2L_2935001 RAL-853_125b 121 chr2L 3072990 3073054 chr2L 3078243 3078307 copia 23 5252 11.0 6.0 8.5 2.4 5317 chr2L 3072990 intron toc - chr2L 3075648 intron toc - chr2L 3078307 intron toc - chr2L_23_3075001 chr2L_3075001 RAL-853_125b 122 chr2L 3108821 3108897 chr2L 3108948 3109024 23 127 6.5 5.0 5.8 3.4 203 chr2L 3108821 exon toc - chr2L 3108922 intron toc - chr2L 3109024 intron toc - chr2L_23_3105001 chr2L_3105001 RAL-853_125b 123 chr2L 3193791 3193851 chr2L 3193927 3193987 26 136 7.5 7.5 7.5 3.1 196 chr2L 3193791 intron CG34393 - chr2L 3193889 intron CG34393 - chr2L 3193987 intron CG34393 - chr2L_26_3190001 chr2L_3190001 RAL-853_125b 124 chr2L 3201995 3202031 chr2L 3202309 3202345 22 313 13.5 4.0 8.8 2.2 350 chr2L 3201995 intergenic not near genes chr2L 3202170 intergenic not near genes chr2L 3202345 intergenic not near genes chr2L_22_3200001 chr2L_3200001 RAL-853_125b 125 chr2L 3202692 3202742 chr2L 3210171 3210221 mdg1 20 7479 11.0 0.0 5.5 3.1 7529 chr2L 3202692 intergenic not near genes chr2L 3206456 intergenic not near genes chr2L 3210221 intergenic CR45336 + chr2L_20_3205001 chr2L_3205001 RAL-853_125b 126 chr2L 3251465 3251516 chr2L 3259080 3259131 springer 17 7614 4.5 10.5 7.5 2.0 7666 chr2L 3251465 intergenic not near genes chr2L 3255298 intergenic not near genes chr2L 3259131 intergenic not near genes chr2L_17_3255001 chr2L_3255001 RAL-853_125b 127 chr2L 3272922 3272968 chr2L 3273048 3273094 17 126 0.0 9.5 4.8 2.9 172 chr2L 3272922 intergenic not near genes chr2L 3273008 intergenic not near genes chr2L 3273094 intergenic not near genes chr2L_17_3270001 chr2L_3270001 RAL-853_125b 128 chr2L 3291205 3291268 chr2L 3291335 3291368 21 127 8.0 11.0 9.5 2.0 163 chr2L 3291205 intergenic CG9664 - chr2L 3291286 3` UTR CG9664 - chr2L 3291368 3` UTR CG9664 - chr2L_21_3290001 chr2L_3290001 RAL-853_125b 129 chr2L 3366967 3367039 chr2L 3367167 3367239 43 200 8.5 9.0 8.8 4.4 272 chr2L 3366967 intron CG34394 - chr2L 3367103 intron CG34394 - chr2L 3367239 intron CG34394 - chr2L_43_3365001 chr2L_3365001 RAL-853_125b 130 chr2L 3376872 3376876 chr2L 3376999 3377003 4 127 2.0 18.5 10.2 0.4 131 chr2L 3376872 intergenic Ptpa +,CG9662 - chr2L 3376938 intergenic Ptpa +,CG9662 - chr2L 3377003 5` UTR Ptpa + chr2L_4_3375001 chr2L_3375001 RAL-853_125b 131 chr2L 3388554 3388625 chr2L 3388845 3388916 pogo 25 289 4.0 6.0 5.0 4.2 362 chr2L 3388554 intergenic CG42460 - chr2L 3388735 intergenic CG42460 - chr2L 3388916 intergenic CG42460 -,CR44791 + chr2L_25_3385001 chr2L_3385001 RAL-853_125b 132 chr2L 3393746 3393805 chr2L 3393873 3393925 31 127 10.5 12.0 11.2 2.5 179 chr2L 3393746 intergenic not near genes chr2L 3393836 intergenic not near genes chr2L 3393925 intergenic not near genes chr2L_31_3390001 chr2L_3390001 RAL-853_125b 133 chr2L 3394976 3395045 chr2L 3395108 3395177 37 131 8.5 10.5 9.5 3.5 201 chr2L 3394976 intergenic not near genes chr2L 3395076 intergenic not near genes chr2L 3395177 intergenic not near genes chr2L_37_3395001 chr2L_3395001 RAL-853_125b 134 chr2L 3425374 3425427 chr2L 3425542 3425595 10 168 29.5 23.0 26.2 0.4 221 chr2L 3425374 intron pgant2 - chr2L 3425484 intron pgant2 - chr2L 3425595 intron pgant2 - chr2L_10_3425001 chr2L_3425001 RAL-853_125b 135 chr2L 3508297 3508357 chr2L 3508425 3508485 7 123 5.5 11.5 8.5 0.7 188 chr2L 3508297 intergenic tim -,CR45299 + chr2L 3508391 intergenic CR45299 +,tim - chr2L 3508485 intergenic CR45299 +,tim - chr2L_7_3505001 chr2L_3505001 RAL-853_125b 136 chr2L 3522984 3523053 chr2L 3523147 3523216 9 160 25.0 29.5 27.2 0.3 232 chr2L 3522984 exon Sr-CIV - chr2L 3523100 intron Sr-CIV - chr2L 3523216 exon Sr-CIV - chr2L_9_3520001 chr2L_3520001 RAL-853_125b 137 chr2L 3526468 3526533 chr2L 3526593 3526597 26 121 20.5 21.0 20.8 1.2 129 chr2L 3526468 exon CG8852 + chr2L 3526532 exon CG8852 + chr2L 3526597 exon CG8852 + chr2L_26_3525001 chr2L_3525001 RAL-853_125b 138 chr2L 3548543 3548613 chr2L 3548672 3548742 15 129 17.5 21.0 19.2 0.7 199 chr2L 3548543 intergenic drm + chr2L 3548642 intergenic drm + chr2L 3548742 intergenic drm + chr2L_15_3545001 chr2L_3545001 RAL-853_125b 139 chr2L 3575379 3575448 chr2L 3575542 3575611 19 160 14.5 17.0 15.8 1.1 232 chr2L 3575379 5` UTR CR43822 + chr2L 3575495 5` UTR CR43822 + chr2L 3575611 5` UTR CR43822 + chr2L_19_3575001 chr2L_3575001 RAL-853_125b 140 chr2L 3582833 3582886 chr2L 3582960 3582996 6 124 15.5 25.5 20.5 0.3 163 chr2L 3582833 intergenic not near genes chr2L 3582914 intergenic not near genes chr2L 3582996 intergenic not near genes chr2L_6_3580001 chr2L_3580001 RAL-853_125b 141 chr2L 3603580 3603651 chr2L 3603726 3603797 11 143 27.0 22.5 24.8 0.4 217 chr2L 3603580 intergenic not near genes chr2L 3603688 intergenic not near genes chr2L 3603797 intergenic odd - chr2L_11_3600001 chr2L_3600001 RAL-853_125b 142 chr2L 3632243 3632275 chr2L 3632370 3632387 10 123 0.5 6.0 3.2 2.4 144 chr2L 3632243 intron for - chr2L 3632315 intron for - chr2L 3632387 intron for - chr2L_10_3630001 chr2L_3630001 RAL-853_125b 143 chr2L 3643423 3643435 chr2L 3643548 3643566 5 129 18.0 16.0 17.0 0.3 143 chr2L 3643423 intron for - chr2L 3643494 intron for - chr2L 3643566 intron for - chr2L_5_3640001 chr2L_3640001 RAL-853_125b 144 chr2L 3649746 3649805 chr2L 3654998 3655057 copia 22 5251 1.5 11.0 6.2 3.1 5311 chr2L 3649746 intron for - chr2L 3652402 intron for - chr2L 3655057 intron for - chr2L_22_3650001 chr2L_3650001 RAL-853_125b 145 chr2L 3663282 3663342 chr2L 3663411 3663471 20 128 16.0 18.0 17.0 1.1 189 chr2L 3663282 5` UTR CG34340 + chr2L 3663376 intron CG34340 + chr2L 3663471 intron CG34340 + chr2L_20_3660001 chr2L_3660001 RAL-853_125b 146 chr2L 3685979 3686056 chr2L 3686117 3686194 18 138 0.5 4.0 2.2 5.6 215 chr2L 3685979 intron CG34340 + chr2L 3686086 intron CG34340 + chr2L 3686194 intron CG34340 + chr2L_18_3685001 chr2L_3685001 RAL-853_125b 147 chr2L 3707520 3707581 chr2L 3707654 3707715 6 134 12.0 12.0 12.0 0.5 195 chr2L 3707520 exon cutlet - chr2L 3707618 intron cutlet - chr2L 3707715 intron cutlet - chr2L_6_3705001 chr2L_3705001 RAL-853_125b 148 chr2L 3753922 3753952 chr2L 3754049 3754079 8 127 23.0 21.5 22.2 0.3 157 chr2L 3753922 intergenic not near genes chr2L 3754000 intergenic not near genes chr2L 3754079 intergenic not near genes chr2L_8_3750001 chr2L_3750001 RAL-853_125b 149 chr2L 3784758 3784872 chr2L 3785667 3785800 7 909 31.5 10.5 21.0 0.3 1042 chr2L 3784758 intergenic CG31960 + chr2L 3785279 exon CG31960 + chr2L 3785800 5` UTR CG31958 + chr2L_7_3785001 chr2L_3785001 RAL-853_125b 150 chr2L 3784699 3784753 chr2L 3785585 3785639 18 888 46.0 19.5 32.8 0.5 940 chr2L 3784699 intergenic CG31960 + chr2L 3785169 exon CG31960 + chr2L 3785639 intergenic CG31960 +,CG31958 + chr2L_18_3785001 chr2L_3785001 RAL-853_125b 151 chr2L 3818988 3819028 chr2L 3819120 3819135 12 130 20.0 14.0 17.0 0.7 147 chr2L 3818988 intergenic CR44077 + chr2L 3819062 intergenic not near genes chr2L 3819135 intergenic not near genes chr2L_12_3815001 chr2L_3815001 RAL-853_125b 152 chr2L 3831787 3831863 chr2L 3831918 3831994 17 131 15.5 12.5 14.0 1.1 207 chr2L 3831787 intergenic not near genes chr2L 3831890 intergenic not near genes chr2L 3831994 intergenic not near genes chr2L_17_3830001 chr2L_3830001 RAL-853_125b 153 chr2L 3849488 3849547 chr2L 3849685 3849744 9 197 21.0 19.0 20.0 0.4 256 chr2L 3849488 intergenic not near genes chr2L 3849616 intergenic not near genes chr2L 3849744 intergenic not near genes chr2L_9_3845001 chr2L_3845001 RAL-853_125b 154 chr2L 3884741 3884812 chr2L 3884868 3884939 18 127 14.5 12.0 13.2 1.3 198 chr2L 3884741 intron capu - chr2L 3884840 intron capu - chr2L 3884939 intron capu - chr2L_18_3880001 chr2L_3880001 RAL-853_125b 155 chr2L 3891850 3891912 chr2L 3891985 3892047 12 134 19.0 18.0 18.5 0.6 197 chr2L 3891850 intron capu - chr2L 3891948 intron capu - chr2L 3892047 intron capu - chr2L_12_3890001 chr2L_3890001 RAL-853_125b 156 chr2L 3906002 3906006 chr2L 3906194 3906202 4 194 15.0 10.0 12.5 0.3 200 chr2L 3906002 intron fred - chr2L 3906102 intron fred - chr2L 3906202 intron fred - chr2L_4_3905001 chr2L_3905001 RAL-853_125b 157 chr2L 3906011 3906061 chr2L 3906185 3906257 18 190 8.0 9.0 8.5 1.9 246 chr2L 3906011 intron fred - chr2L 3906134 intron fred - chr2L 3906257 intron fred - chr2L_18_3905001 chr2L_3905001 RAL-853_125b 158 chr2L 3936578 3936653 chr2L 3936708 3936783 13 130 9.0 13.0 11.0 1.1 205 chr2L 3936578 intron fred - chr2L 3936680 intron fred - chr2L 3936783 intron fred - chr2L_13_3935001 chr2L_3935001 RAL-853_125b 159 chr2L 3943758 3943819 chr2L 3943899 3943960 19 140 5.5 12.0 8.8 1.9 202 chr2L 3943758 intron fred - chr2L 3943859 intron fred - chr2L 3943960 intron fred - chr2L_19_3940001 chr2L_3940001 RAL-853_125b 160 chr2L 4001622 4001678 chr2L 4001770 4001826 5 148 6.5 11.0 8.8 0.5 204 chr2L 4001622 intergenic CR45344 + chr2L 4001724 intergenic CR45344 + chr2L 4001826 intergenic CR45344 + chr2L_5_4000001 chr2L_4000001 RAL-853_125b 161 chr2L 4027663 4027695 chr2L 4027789 4027821 4 126 4.0 9.0 6.5 0.5 158 chr2L 4027663 intergenic not near genes chr2L 4027742 intergenic not near genes chr2L 4027821 intergenic not near genes chr2L_4_4025001 chr2L_4025001 RAL-853_125b 162 chr2L 4037750 4037800 chr2L 4037887 4037937 24 137 10.5 6.5 8.5 2.5 187 chr2L 4037750 intron ed + chr2L 4037844 intron ed + chr2L 4037937 intron ed + chr2L_24_4035001 chr2L_4035001 RAL-853_125b 163 chr2L 4066001 4066053 chr2L 4068876 4068921 Juan 14 2870 8.0 5.5 6.8 1.8 2920 chr2L 4066001 intron ed + chr2L 4067461 intron ed + chr2L 4068921 intron ed + chr2L_14_4065001 chr2L_4065001 RAL-853_125b 164 chr2L 4109918 4109936 chr2L 4110049 4110069 8 133 9.0 18.5 13.8 0.5 151 chr2L 4109918 intron ed + chr2L 4109994 intron ed + chr2L 4110069 intron ed + chr2L_8_4105001 chr2L_4105001 RAL-853_125b 165 chr2L 4147922 4147963 chr2L 4148048 4148089 22 126 5.5 9.5 7.5 2.6 167 chr2L 4147922 intergenic not near genes chr2L 4148006 intergenic not near genes chr2L 4148089 intergenic not near genes chr2L_22_4145001 chr2L_4145001 RAL-853_125b 166 chr2L 4150572 4150650 chr2L 4150702 4150780 14 123 3.5 3.5 3.5 3.1 208 chr2L 4150572 exon CG2955 + chr2L 4150676 exon CG2955 + chr2L 4150780 exon CG2955 + chr2L_14_4150001 chr2L_4150001 RAL-853_125b 167 chr2L 4160465 4160534 chr2L 4160926 4160975 26 457 8.0 5.5 6.8 3.3 510 chr2L 4160465 intergenic not near genes chr2L 4160720 intergenic not near genes chr2L 4160975 intergenic not near genes chr2L_26_4160001 chr2L_4160001 RAL-853_125b 168 chr2L 4180077 4180118 chr2L 4180203 4180244 12 126 6.5 6.0 6.2 1.7 167 chr2L 4180077 intergenic not near genes chr2L 4180160 intergenic not near genes chr2L 4180244 intergenic not near genes chr2L_12_4180001 chr2L_4180001 RAL-853_125b 169 chr2L 4181293 4181297 chr2L 4183975 4183979 Burdock 4 2682 8.0 23.0 15.5 0.2 2686 chr2L 4181293 intergenic not near genes chr2L 4182636 intergenic not near genes chr2L 4183979 intergenic not near genes chr2L_4_4180001 chr2L_4180001 RAL-853_125b 170 chr2L 4184425 4184500 chr2L 4184794 4184869 26 369 10.0 6.0 8.0 2.9 444 chr2L 4184425 intergenic not near genes chr2L 4184647 intergenic not near genes chr2L 4184869 intergenic not near genes chr2L_26_4180001 chr2L_4180001 RAL-853_125b 171 chr2L 4265444 4265499 chr2L 4265580 4265635 12 135 6.5 5.0 5.8 1.8 191 chr2L 4265444 intergenic not near genes chr2L 4265540 intergenic not near genes chr2L 4265635 intergenic not near genes chr2L_12_4265001 chr2L_4265001 RAL-853_125b 172 chr2L 4275081 4275090 chr2L 4275215 4275224 6 134 0.5 20.0 10.2 0.5 143 chr2L 4275081 intergenic not near genes chr2L 4275152 intergenic not near genes chr2L 4275224 intergenic not near genes chr2L_6_4275001 chr2L_4275001 RAL-853_125b 173 chr2L 4275093 4275100 chr2L 4275190 4275234 7 129 0.5 13.5 7.0 0.9 141 chr2L 4275093 intergenic not near genes chr2L 4275164 intergenic not near genes chr2L 4275234 intergenic not near genes chr2L_7_4275001 chr2L_4275001 RAL-853_125b 174 chr2L 4335547 4335596 chr2L 4335681 4335738 7 141 7.5 0.0 3.8 1.5 191 chr2L 4335547 intron Atet + chr2L 4335642 intron Atet + chr2L 4335738 intron Atet + chr2L_7_4335001 chr2L_4335001 RAL-853_125b 175 chr2L 4351423 4351500 chr2L 4351549 4351626 44 122 8.5 5.5 7.0 5.5 203 chr2L 4351423 5` UTR CR44700 + chr2L 4351524 intergenic CR44700 + chr2L 4351626 intergenic CR44700 + chr2L_44_4350001 chr2L_4350001 RAL-853_125b 176 chr2L 4356589 4356632 chr2L 4356718 4356761 26 129 0.0 11.0 5.5 4.0 172 chr2L 4356589 intergenic not near genes chr2L 4356675 intergenic not near genes chr2L 4356761 intergenic not near genes chr2L_26_4355001 chr2L_4355001 RAL-853_125b 177 chr2L 4601661 4601731 chr2L 4609146 4609222 mdg1 23 7490 10.5 8.5 9.5 2.2 7561 chr2L 4601661 intron dp - chr2L 4605442 intron dp - chr2L 4609222 intron dp - chr2L_23_4605001 chr2L_4605001 RAL-853_125b 178 chr2L 4624476 4624494 chr2L 4624795 4624813 10 319 19.0 6.5 12.8 0.7 337 chr2L 4624476 intergenic not near genes chr2L 4624644 intergenic not near genes chr2L 4624813 intergenic not near genes chr2L_10_4620001 chr2L_4620001 RAL-853_125b 179 chr2L 4624495 4624540 chr2L 4624794 4624839 29 308 10.0 6.5 8.2 3.2 344 chr2L 4624495 intergenic not near genes chr2L 4624667 intergenic not near genes chr2L 4624839 intergenic not near genes chr2L_29_4620001 chr2L_4620001 RAL-853_125b 180 chr2L 4661794 4661844 chr2L 4669424 4669474 opus 20 7630 11.5 11.5 11.5 1.6 7680 chr2L 4661794 intergenic not near genes chr2L 4665634 intergenic not near genes chr2L 4669474 intergenic not near genes chr2L_20_4665001 chr2L_4665001 RAL-853_125b 181 chr2L 4698782 4698857 chr2L 4699271 4699341 23 486 56.5 25.0 40.8 0.6 559 chr2L 4698782 intron CG34351 + chr2L 4699062 intron CG34351 + chr2L 4699341 intron CG34351 + chr2L_23_4695001 chr2L_4695001 RAL-853_125b 182 chr2L 4702463 4702465 chr2L 4702630 4702639 4 175 19.5 10.5 15.0 0.2 176 chr2L 4702463 intron CG34351 + chr2L 4702551 intron CG34351 + chr2L 4702639 intron CG34351 + chr2L_4_4700001 chr2L_4700001 RAL-853_125b 183 chr2L 4702466 4702515 chr2L 4702626 4702672 24 176 7.5 9.0 8.2 2.6 206 chr2L 4702466 intron CG34351 + chr2L 4702569 intron CG34351 + chr2L 4702672 intron CG34351 + chr2L_24_4700001 chr2L_4700001 RAL-853_125b 184 chr2L 4710305 4710369 chr2L 4710428 4710502 22 130 8.5 5.0 6.8 2.8 197 chr2L 4710305 intron CG34351 + chr2L 4710404 intron CG34351 + chr2L 4710502 intron CG34351 + chr2L_22_4710001 chr2L_4710001 RAL-853_125b 185 chr2L 4740042 4740110 chr2L 4740170 4740240 17 130 6.5 7.5 7.0 2.1 198 chr2L 4740042 intron CG15630 - chr2L 4740141 intron CG15630 - chr2L 4740240 intron CG15630 - chr2L_17_4740001 chr2L_4740001 RAL-853_125b 186 chr2L 4747487 4747567 chr2L 4747739 4747819 18 251 4.0 0.0 2.0 6.0 332 chr2L 4747487 intron CG15630 - chr2L 4747653 intron CG15630 - chr2L 4747819 intron CG15630 - chr2L_18_4745001 chr2L_4745001 RAL-853_125b 187 chr2L 4793283 4793318 chr2L 4793628 4793663 11 343 9.5 7.0 8.2 1.2 380 chr2L 4793283 intron CG15630 - chr2L 4793473 intron CG15630 - chr2L 4793663 exon CG15630 - chr2L_11_4790001 chr2L_4790001 RAL-853_125b 188 chr2L 4819442 4819519 chr2L 4819615 4819692 31 172 8.5 6.5 7.5 3.6 250 chr2L 4819442 intergenic not near genes chr2L 4819567 intergenic not near genes chr2L 4819692 intergenic not near genes chr2L_31_4815001 chr2L_4815001 RAL-853_125b 189 chr2L 4858435 4858483 chr2L 4858573 4858616 6 137 6.0 5.0 5.5 0.9 181 chr2L 4858435 intron pog + chr2L 4858526 intron pog + chr2L 4858616 intron pog + chr2L_6_4855001 chr2L_4855001 RAL-853_125b 190 chr2L 4869434 4869496 chr2L 4869554 4869623 31 128 9.0 11.5 10.2 2.8 189 chr2L 4869434 intron pog + chr2L 4869528 intron pog + chr2L 4869623 intron pog + chr2L_31_4865001 chr2L_4865001 RAL-853_125b 191 chr2L 4918127 4918187 chr2L 4923250 4923310 jockey 27 5123 4.5 5.5 5.0 4.5 5183 chr2L 4918127 intron hoe1 - chr2L 4920718 intron hoe1 - chr2L 4923310 intron hoe1 - chr2L_27_4920001 chr2L_4920001 RAL-853_125b 192 chr2L 4925623 4925696 chr2L 4925752 4925825 9 129 5.0 6.0 5.5 1.4 202 chr2L 4925623 intron hoe1 - chr2L 4925724 intron hoe1 - chr2L 4925825 intron hoe1 - chr2L_9_4925001 chr2L_4925001 RAL-853_125b 193 chr2L 4953481 4953484 chr2L 4953772 4953775 pogo 5 291 15.0 0.5 7.8 0.6 294 chr2L 4953481 intergenic Jon25Bii - chr2L 4953628 intergenic Jon25Bii - chr2L 4953775 intergenic not near genes chr2L_5_4950001 chr2L_4950001 RAL-853_125b 194 chr2L 5084995 5085069 chr2L 5085137 5085198 9 139 0.0 5.0 2.5 2.6 203 chr2L 5084995 intron pgant5 - chr2L 5085096 intron pgant5 - chr2L 5085198 intron pgant5 - chr2L_9_5085001 chr2L_5085001 RAL-853_125b 195 chr2L 5092362 5092439 chr2L 5092499 5092576 23 137 6.0 6.5 6.2 3.2 214 chr2L 5092362 intron pgant5 - chr2L 5092469 intron pgant5 - chr2L 5092576 intron pgant5 - chr2L_23_5090001 chr2L_5090001 RAL-853_125b 196 chr2L 5120928 5120995 chr2L 5121071 5121139 29 144 8.5 4.0 6.2 4.0 211 chr2L 5120928 intron Msp300 + chr2L 5121034 intron Msp300 + chr2L 5121139 intron Msp300 + chr2L_29_5120001 chr2L_5120001 RAL-853_125b 197 chr2L 5147680 5147751 chr2L 5147962 5148033 26 278 6.5 4.0 5.2 4.2 353 chr2L 5147680 intron Msp300 + chr2L 5147856 intron Msp300 + chr2L 5148033 intron Msp300 + chr2L_26_5145001 chr2L_5145001 RAL-853_125b 198 chr2L 5340898 5340966 chr2L 5341315 5341388 36 420 8.0 0.0 4.0 7.2 490 chr2L 5340898 exon CG12512 - chr2L 5341143 intron CG12512 - chr2L 5341388 intron CG12512 - chr2L_36_5340001 chr2L_5340001 RAL-853_125b 199 chr2L 5342727 5342792 chr2L 5345157 5345222 Doc 19 2430 11.5 6.5 9.0 1.9 2495 chr2L 5342727 intergenic CG12512 - chr2L 5343974 intergenic not near genes chr2L 5345222 intergenic not near genes chr2L_19_5340001 chr2L_5340001 RAL-853_125b 200 chr2L 5378386 5378449 chr2L 5378515 5378578 33 129 6.0 9.5 7.8 3.7 192 chr2L 5378386 intergenic not near genes chr2L 5378482 intergenic not near genes chr2L 5378578 intergenic not near genes chr2L_33_5375001 chr2L_5375001 RAL-853_125b 201 chr2L 5405274 5405334 chr2L 5405465 5405525 22 191 6.5 7.5 7.0 2.8 251 chr2L 5405274 intron H15 + chr2L 5405400 intron H15 + chr2L 5405525 intron H15 + chr2L_22_5405001 chr2L_5405001 RAL-853_125b 202 chr2L 5433800 5433880 chr2L 5433930 5434010 29 128 9.0 5.5 7.2 3.5 210 chr2L 5433800 3` UTR CR43715 - chr2L 5433905 3` UTR CR43715 - chr2L 5434010 3` UTR CR43715 - chr2L_29_5430001 chr2L_5430001 RAL-853_125b 203 chr2L 5449654 5449690 chr2L 5449804 5449815 9 142 14.5 0.5 7.5 1.1 161 chr2L 5449654 intergenic not near genes chr2L 5449734 intergenic not near genes chr2L 5449815 intergenic not near genes chr2L_9_5445001 chr2L_5445001 RAL-853_125b 204 chr2L 5490055 5490093 chr2L 5490172 5490220 10 128 7.5 6.5 7.0 1.2 165 chr2L 5490055 intergenic not near genes chr2L 5490138 intergenic not near genes chr2L 5490220 intergenic not near genes chr2L_10_5490001 chr2L_5490001 RAL-853_125b 205 chr2L 5508478 5508557 chr2L 5508605 5508683 16 126 6.0 8.5 7.2 2.0 205 chr2L 5508478 intergenic not near genes chr2L 5508580 intergenic not near genes chr2L 5508683 intergenic not near genes chr2L_16_5505001 chr2L_5505001 RAL-853_125b 206 chr2L 5563644 5563712 chr2L 5563778 5563846 26 134 0.0 6.0 3.0 6.5 202 chr2L 5563644 intergenic GluRIIB + chr2L 5563745 intergenic GluRIIB + chr2L 5563846 intergenic GluRIIB + chr2L_26_5560001 chr2L_5560001 RAL-853_125b 207 chr2L 5592365 5592398 chr2L 5592495 5592528 10 129 3.5 5.0 4.2 1.9 163 chr2L 5592365 intergenic not near genes chr2L 5592446 intergenic not near genes chr2L 5592528 intergenic not near genes chr2L_10_5590001 chr2L_5590001 RAL-853_125b 208 chr2L 5672126 5672170 chr2L 5672257 5672301 20 131 8.5 5.5 7.0 2.5 175 chr2L 5672126 intergenic not near genes chr2L 5672214 intergenic not near genes chr2L 5672301 intergenic not near genes chr2L_20_5670001 chr2L_5670001 RAL-853_125b 209 chr2L 5672172 5672193 chr2L 5672303 5672324 9 131 5.5 10.5 8.0 1.0 152 chr2L 5672172 intergenic not near genes chr2L 5672248 intergenic not near genes chr2L 5672324 intergenic not near genes chr2L_9_5670001 chr2L_5670001 RAL-853_125b 210 chr2L 5686410 5686444 chr2L 5686542 5686576 10 132 10.0 19.0 14.5 0.6 166 chr2L 5686410 intergenic not near genes chr2L 5686493 intergenic not near genes chr2L 5686576 intergenic not near genes chr2L_10_5685001 chr2L_5685001 RAL-853_125b 211 chr2L 5695812 5695883 chr2L 5695954 5696025 37 142 7.5 4.5 6.0 5.3 213 chr2L 5695812 intergenic not near genes chr2L 5695918 intergenic not near genes chr2L 5696025 intergenic not near genes chr2L_37_5695001 chr2L_5695001 RAL-853_125b 212 chr2L 5749855 5749930 chr2L 5749984 5750028 32 119 4.5 9.5 7.0 4.0 173 chr2L 5749855 intron CG11030 + chr2L 5749942 intron CG11030 + chr2L 5750028 intron CG11030 + chr2L_32_5745001 chr2L_5745001 RAL-853_125b 213 chr2L 5789981 5790045 chr2L 5790110 5790174 23 129 3.0 8.5 5.8 3.4 193 chr2L 5789981 intron CG9171 - chr2L 5790078 intron CG9171 - chr2L 5790174 intron CG9171 - chr2L_23_5790001 chr2L_5790001 RAL-853_125b 214 chr2L 5796879 5796926 chr2L 5797005 5797053 15 127 8.5 8.0 8.2 1.6 174 chr2L 5796879 intron CG9171 - chr2L 5796966 intron CG9171 - chr2L 5797053 intron CG9171 - chr2L_15_5795001 chr2L_5795001 RAL-853_125b 215 chr2L 5807987 5808056 chr2L 5808308 5808359 30 314 14.0 7.5 10.8 2.5 372 chr2L 5807987 exon CG11034 + chr2L 5808173 exon CG11034 + chr2L 5808359 exon CG11034 + chr2L_30_5805001 chr2L_5805001 RAL-853_125b 216 chr2L 5827669 5827725 chr2L 5836727 5836783 roo 18 9057 8.0 8.5 8.2 2.0 9114 chr2L 5827669 intron TrissinR + chr2L 5832226 intron TrissinR + chr2L 5836783 intron TrissinR + chr2L_18_5830001 chr2L_5830001 RAL-853_125b 217 chr2L 5887567 5887628 chr2L 5887698 5887759 24 131 6.0 13.0 9.5 2.3 192 chr2L 5887567 3` UTR CR44577 - chr2L 5887663 3` UTR CR44577 - chr2L 5887759 3` UTR CR44577 - chr2L_24_5885001 chr2L_5885001 RAL-853_125b 218 chr2L 5897552 5897574 chr2L 5897685 5897695 14 132 26.0 16.0 21.0 0.6 143 chr2L 5897552 intergenic not near genes chr2L 5897624 intergenic not near genes chr2L 5897695 intergenic not near genes chr2L_14_5895001 chr2L_5895001 RAL-853_125b 219 chr2L 5897576 5897615 chr2L 5897676 5897748 32 125 10.0 14.0 12.0 2.5 172 chr2L 5897576 intergenic not near genes chr2L 5897662 intergenic not near genes chr2L 5897748 intergenic not near genes chr2L_32_5895001 chr2L_5895001 RAL-853_125b 220 chr2L 5922765 5922914 chr2L 5922904 5923056 15 140 0.0 0.0 0.0 15.0 291 chr2L 5922765 3` UTR bchs + chr2L 5922910 3` UTR CG9016 - chr2L 5923056 3` UTR CG9016 - chr2L_15_5920001 chr2L_5920001 RAL-853_125b 221 chr2L 5926219 5926453 chr2L 5926349 5926591 18 182 0.0 0.0 0.0 18.0 372 chr2L 5926219 intron dsf + chr2L 5926405 intron dsf + chr2L 5926591 intron dsf + chr2L_18_5925001 chr2L_5925001 RAL-853_125b 222 chr2L 5931268 5931515 chr2L 5931430 5931674 28 159 0.0 0.0 0.0 28.0 406 chr2L 5931268 intron dsf + chr2L 5931471 intron dsf + chr2L 5931674 intron dsf + chr2L_28_5930001 chr2L_5930001 RAL-853_125b 223 chr2L 5958251 5958264 chr2L 5958379 5958387 8 127 1.5 9.0 5.2 1.3 136 chr2L 5958251 exon Vm26Ac - chr2L 5958319 exon Vm26Ac - chr2L 5958387 exon Vm26Ac - chr2L_8_5955001 chr2L_5955001 RAL-853_125b 224 chr2L 5962223 5962295 chr2L 5962349 5962421 23 126 8.5 7.0 7.8 2.6 198 chr2L 5962223 intergenic not near genes chr2L 5962322 intergenic not near genes chr2L 5962421 intergenic not near genes chr2L_23_5960001 chr2L_5960001 RAL-853_125b 225 chr2L 5981245 5981304 chr2L 5981384 5981443 18 139 6.5 5.0 5.8 2.6 198 chr2L 5981245 intergenic chic - chr2L 5981344 intergenic chic -,eIF-4a + chr2L 5981443 intergenic eIF-4a +,chic - chr2L_18_5980001 chr2L_5980001 RAL-853_125b 226 chr2L 6007046 6007073 chr2L 6007172 6007199 7 126 15.5 3.0 9.2 0.7 153 chr2L 6007046 intergenic Gal -,CG9098 - chr2L 6007122 intergenic CG9098 -,Gal - chr2L 6007199 intergenic CG9098 -,Gal - chr2L_7_6005001 chr2L_6005001 RAL-853_125b 227 chr2L 6050393 6050463 chr2L 6050547 6050617 21 154 9.5 0.5 5.0 3.5 224 chr2L 6050393 3` UTR CG12393 + chr2L 6050505 intergenic CG12393 +,CG9135 + chr2L 6050617 intergenic CG12393 +,CG9135 + chr2L_21_6050001 chr2L_6050001 RAL-853_125b 228 chr2L 6075039 6075065 chr2L 6075181 6075207 14 142 6.0 0.0 3.0 3.5 168 chr2L 6075039 intergenic CR43801 - chr2L 6075123 intergenic CR43801 - chr2L 6075207 intergenic CR43801 - chr2L_14_6075001 chr2L_6075001 RAL-853_125b 229 chr2L 6077543 6077607 chr2L 6077702 6077766 24 159 10.5 10.5 10.5 2.1 223 chr2L 6077543 intergenic not near genes chr2L 6077654 intergenic not near genes chr2L 6077766 intergenic not near genes chr2L_24_6075001 chr2L_6075001 RAL-853_125b 230 chr2L 6104741 6104813 chr2L 6105337 6105409 37 595 6.5 5.5 6.0 5.3 668 chr2L 6104741 intron stai + chr2L 6105075 intron stai + chr2L 6105409 intron stai + chr2L_37_6105001 chr2L_6105001 RAL-853_125b 231 chr2L 6106256 6106310 chr2L 6106367 6106440 19 126 0.5 8.5 4.5 3.5 184 chr2L 6106256 intron stai + chr2L 6106348 intron stai + chr2L 6106440 intron stai + chr2L_19_6105001 chr2L_6105001 RAL-853_125b 232 chr2L 6117504 6117566 chr2L 6117651 6117713 8 147 5.5 15.5 10.5 0.7 209 chr2L 6117504 intron stai + chr2L 6117608 intron stai + chr2L 6117713 intron stai + chr2L_8_6115001 chr2L_6115001 RAL-853_125b 233 chr2L 6146617 6146654 chr2L 6146743 6146780 15 125 9.0 9.0 9.0 1.5 163 chr2L 6146617 intergenic not near genes chr2L 6146698 intergenic not near genes chr2L 6146780 intergenic not near genes chr2L_15_6145001 chr2L_6145001 RAL-853_125b 234 chr2L 6227324 6227388 chr2L 6227455 6227506 11 130 4.5 8.5 6.5 1.5 182 chr2L 6227324 intergenic Ugt37b1 + chr2L 6227415 intergenic not near genes chr2L 6227506 intergenic not near genes chr2L_11_6225001 chr2L_6225001 RAL-853_125b 235 chr2L 6242929 6242985 chr2L 6243077 6243133 19 148 11.5 4.0 7.8 2.2 204 chr2L 6242929 intergenic not near genes chr2L 6243031 intergenic not near genes chr2L 6243133 intergenic not near genes chr2L_19_6240001 chr2L_6240001 RAL-853_125b 236 chr2L 6279592 6279630 chr2L 6279721 6279759 INE-1 18 129 12.0 2.0 7.0 2.2 167 chr2L 6279592 intron Ddr + chr2L 6279676 intron Ddr + chr2L 6279759 intron Ddr + chr2L_18_6275001 chr2L_6275001 RAL-853_125b 237 chr2L 6283904 6283943 chr2L 6284061 6284104 16 160 10.0 0.5 5.2 2.6 200 chr2L 6283904 intron Ddr + chr2L 6284004 intron Ddr + chr2L 6284104 intron Ddr + chr2L_16_6280001 chr2L_6280001 RAL-853_125b 238 chr2L 6308265 6308333 chr2L 6308398 6308466 34 133 6.0 9.5 7.8 3.9 201 chr2L 6308265 intron Ddr + chr2L 6308366 intron Ddr + chr2L 6308466 intron,exon Ddr +,CG43922 - chr2L_34_6305001 chr2L_6305001 RAL-853_125b 239 chr2L 6315249 6315319 chr2L 6315391 6315461 22 141 8.0 10.0 9.0 2.2 212 chr2L 6315249 intron Ddr + chr2L 6315355 intron Ddr + chr2L 6315461 intron Ddr + chr2L_22_6315001 chr2L_6315001 RAL-853_125b 240 chr2L 6349028 6349075 chr2L 6349156 6349203 19 128 4.5 7.0 5.8 2.8 175 chr2L 6349028 intergenic CG9498 - chr2L 6349116 intergenic CG9498 - chr2L 6349203 intergenic CG9498 - chr2L_19_6345001 chr2L_6345001 RAL-853_125b 241 chr2L 6363103 6363177 chr2L 6366075 6366149 Burdock 28 2971 7.5 5.0 6.2 3.9 3046 chr2L 6363103 intergenic not near genes chr2L 6364626 intergenic not near genes chr2L 6366149 intergenic not near genes chr2L_28_6360001 chr2L_6360001 RAL-853_125b 242 chr2L 6380207 6380274 chr2L 6380343 6380410 11 134 10.0 0.0 5.0 1.8 203 chr2L 6380207 intron CG42368 - chr2L 6380308 intron CG42368 - chr2L 6380410 intron CG42368 - chr2L_11_6380001 chr2L_6380001 RAL-853_125b 243 chr2L 6387962 6388008 chr2L 6388091 6388137 18 129 12.0 4.0 8.0 2.0 175 chr2L 6387962 intron CG42368 - chr2L 6388050 intron CG42368 - chr2L 6388137 intron CG42368 - chr2L_18_6385001 chr2L_6385001 RAL-853_125b 244 chr2L 6390107 6390130 chr2L 6390237 6390260 9 130 11.5 1.5 6.5 1.2 153 chr2L 6390107 intron CG42368 - chr2L 6390184 intron CG42368 - chr2L 6390260 intron CG42368 - chr2L_9_6390001 chr2L_6390001 RAL-853_125b 245 chr2L 6414699 6414759 chr2L 6414829 6414889 23 130 1.0 6.5 3.8 4.8 190 chr2L 6414699 3` UTR CG13982 + chr2L 6414794 3` UTR CG13982 + chr2L 6414889 3` UTR CG13982 + chr2L_23_6410001 chr2L_6410001 RAL-853_125b 246 chr2L 6426811 6426878 chr2L 6445121 6445188 roo 29 18309 12.5 5.5 9.0 2.9 18377 chr2L 6426811 3` UTR CG9527 - chr2L 6436000 intron CG9527 - chr2L 6445188 exon CG9527 - chr2L_29_6435001 chr2L_6435001 RAL-853_125b 247 chr2L 6483582 6483585 chr2L 6483766 6483778 4 190 1.5 1.5 1.5 1.6 196 chr2L 6483582 exon DLP + chr2L 6483680 exon DLP + chr2L 6483778 exon DLP + chr2L_4_6480001 chr2L_6480001 RAL-853_125b 248 chr2L 6590056 6590081 chr2L 6590184 6590209 8 127 19.0 1.0 10.0 0.7 153 chr2L 6590056 intron CG11319 - chr2L 6590132 intron CG11319 - chr2L 6590209 intron CG11319 - chr2L_8_6590001 chr2L_6590001 RAL-853_125b 249 chr2L 6590085 6590118 chr2L 6590189 6590240 13 121 12.0 1.0 6.5 1.7 155 chr2L 6590085 intron CG11319 - chr2L 6590162 intron CG11319 - chr2L 6590240 intron CG11319 - chr2L_13_6590001 chr2L_6590001 RAL-853_125b 250 chr2L 6640862 6640881 chr2L 6641007 6641026 4 145 16.0 4.0 10.0 0.4 164 chr2L 6640862 exon CG31635 - chr2L 6640944 intron CG31635 - chr2L 6641026 intron CG31635 - chr2L_4_6640001 chr2L_6640001 RAL-853_125b 251 chr2L 6640884 6640930 chr2L 6641006 6641074 14 142 11.0 3.5 7.2 1.7 190 chr2L 6640884 exon CG31635 - chr2L 6640979 intron CG31635 - chr2L 6641074 intron CG31635 - chr2L_14_6640001 chr2L_6640001 RAL-853_125b 252 chr2L 6728693 6728704 chr2L 6728827 6728833 5 132 15.0 6.0 10.5 0.4 140 chr2L 6728693 exon Liprin-alpha + chr2L 6728763 exon Liprin-alpha + chr2L 6728833 intron Liprin-alpha + chr2L_5_6725001 chr2L_6725001 RAL-853_125b 253 chr2L 6728718 6728762 chr2L 6728825 6728896 19 128 5.0 5.0 5.0 3.2 178 chr2L 6728718 exon Liprin-alpha + chr2L 6728807 intron Liprin-alpha + chr2L 6728896 exon Liprin-alpha + chr2L_19_6725001 chr2L_6725001 RAL-853_125b 254 chr2L 6740685 6740747 chr2L 6740821 6740884 13 136 0.0 13.0 6.5 1.7 199 chr2L 6740685 intergenic TTLL3A - chr2L 6740784 intergenic not near genes chr2L 6740884 intergenic not near genes chr2L_13_6740001 chr2L_6740001 RAL-853_125b 255 chr2L 6771946 6772019 chr2L 6772083 6772126 19 129 4.5 12.0 8.2 2.1 180 chr2L 6771946 intron CG11321 - chr2L 6772036 intron CG11321 - chr2L 6772126 intron CG11321 - chr2L_19_6770001 chr2L_6770001 RAL-853_125b 256 chr2L 6772563 6772571 chr2L 6772692 6772700 5 128 7.0 13.0 10.0 0.5 137 chr2L 6772563 5` UTR CG11321 - chr2L 6772632 5` UTR CG11321 - chr2L 6772700 5` UTR CG11321 - chr2L_5_6770001 chr2L_6770001 RAL-853_125b 257 chr2L 6799505 6799523 chr2L 6799636 6799661 4 136 10.5 5.0 7.8 0.5 156 chr2L 6799505 5` UTR CR43610 + chr2L 6799583 5` UTR CR43610 + chr2L 6799661 intergenic CR43610 +,CG17376 - chr2L_4_6795001 chr2L_6795001 RAL-853_125b 258 chr2L 6799537 6799559 chr2L 6799630 6799697 6 130 7.0 5.0 6.0 0.9 160 chr2L 6799537 5` UTR CR43610 + chr2L 6799617 intergenic CR43610 +,CG17376 - chr2L 6799697 intergenic CR43610 +,CG17376 - chr2L_6_6795001 chr2L_6795001 RAL-853_125b 259 chr2L 6818082 6818141 chr2L 6818221 6818278 16 139 3.0 7.0 5.0 2.7 196 chr2L 6818082 intergenic not near genes chr2L 6818180 intergenic not near genes chr2L 6818278 intergenic not near genes chr2L_16_6815001 chr2L_6815001 RAL-853_125b 260 chr2L 6836466 6836529 chr2L 6836598 6836661 25 132 9.5 6.0 7.8 2.8 195 chr2L 6836466 intron sens-2 + chr2L 6836564 intron sens-2 + chr2L 6836661 intron sens-2 + chr2L_25_6835001 chr2L_6835001 RAL-853_125b 261 chr2L 6850345 6850407 chr2L 6850478 6850540 15 133 12.5 8.5 10.5 1.3 195 chr2L 6850345 intergenic not near genes chr2L 6850442 intergenic not near genes chr2L 6850540 intergenic not near genes chr2L_15_6850001 chr2L_6850001 RAL-853_125b 262 chr2L 6851469 6851505 chr2L 6851595 6851631 7 126 8.5 5.0 6.8 0.9 162 chr2L 6851469 intergenic not near genes chr2L 6851550 intergenic not near genes chr2L 6851631 intergenic not near genes chr2L_7_6850001 chr2L_6850001 RAL-853_125b 263 chr2L 6876748 6876802 chr2L 6882983 6883043 diver 14 6234 11.5 10.5 11.0 1.2 6295 chr2L 6876748 intron Nlg2 + chr2L 6879896 intron Nlg2 + chr2L 6883043 intron Nlg2 + chr2L_14_6875001 chr2L_6875001 RAL-853_125b 264 chr2L 6887505 6887521 chr2L 6887704 6887723 7 202 30.0 24.5 27.2 0.2 218 chr2L 6887505 intron Nlg2 + chr2L 6887614 intron Nlg2 + chr2L 6887723 intron Nlg2 + chr2L_7_6885001 chr2L_6885001 RAL-853_125b 265 chr2L 6891407 6891464 chr2L 6891555 6891612 20 147 13.5 19.5 16.5 1.1 205 chr2L 6891407 intron Nlg2 + chr2L 6891510 intron Nlg2 + chr2L 6891612 intron Nlg2 + chr2L_20_6890001 chr2L_6890001 RAL-853_125b 266 chr2L 6922029 6922102 chr2L 6922195 6922255 16 165 35.0 36.0 35.5 0.4 226 chr2L 6922029 intron Hrb27C + chr2L 6922142 intron Hrb27C + chr2L 6922255 intron Hrb27C + chr2L_16_6920001 chr2L_6920001 RAL-853_125b 267 chr2L 6949084 6949139 chr2L 6949215 6949270 4 131 6.0 4.5 5.2 0.6 186 chr2L 6949084 intergenic Gas41 -,ihog - chr2L 6949177 intergenic Gas41 -,ihog - chr2L 6949270 intergenic Gas41 -,ihog - chr2L_4_6945001 chr2L_6945001 RAL-853_125b 268 chr2L 6969236 6969241 chr2L 6969364 6969371 4 129 30.5 22.5 26.5 0.1 135 chr2L 6969236 3` UTR snRNP-U1-70K - chr2L 6969304 3` UTR snRNP-U1-70K - chr2L 6969371 3` UTR snRNP-U1-70K - chr2L_4_6965001 chr2L_6965001 RAL-853_125b 269 chr2L 6969245 6969302 chr2L 6969363 6969432 22 128 20.0 22.5 21.2 1.0 187 chr2L 6969245 3` UTR snRNP-U1-70K - chr2L 6969338 3` UTR snRNP-U1-70K - chr2L 6969432 3` UTR snRNP-U1-70K - chr2L_22_6965001 chr2L_6965001 RAL-853_125b 270 chr2L 6972218 6972230 chr2L 6972691 6972703 4 473 16.0 5.0 10.5 0.3 485 chr2L 6972218 intergenic snRNP-U1-70K - chr2L 6972460 intergenic uif - chr2L 6972703 intergenic uif - chr2L_4_6970001 chr2L_6970001 RAL-853_125b 271 chr2L 6991375 6991421 chr2L 6998557 6998585 HMS-Beagle 6 7172 6.5 5.0 5.8 0.9 7210 chr2L 6991375 intron uif - chr2L 6994980 intron uif - chr2L 6998585 intron uif - chr2L_6_6990001 chr2L_6990001 RAL-853_125b 272 chr2L 7042030 7042044 chr2L 7042169 7042183 4 139 27.0 29.5 28.2 0.1 153 chr2L 7042030 intron milt + chr2L 7042106 intron milt + chr2L 7042183 intron milt + chr2L_4_7040001 chr2L_7040001 RAL-853_125b 273 chr2L 7082854 7082885 chr2L 7082990 7083022 7 137 19.0 18.0 18.5 0.4 168 chr2L 7082854 intron Pvf2 - chr2L 7082938 intron Pvf2 - chr2L 7083022 intron Pvf2 - chr2L_7_7080001 chr2L_7080001 RAL-853_125b 274 chr2L 7106909 7106976 chr2L 7107118 7107185 6 207 19.5 20.5 20.0 0.3 276 chr2L 7106909 intron Pvf3 - chr2L 7107047 intron Pvf3 - chr2L 7107185 exon Pvf3 - chr2L_6_7105001 chr2L_7105001 RAL-853_125b 275 chr2L 7111705 7111792 chr2L 7111840 7111927 14 135 5.0 3.5 4.2 2.7 222 chr2L 7111705 intron Pvf3 - chr2L 7111816 intron Pvf3 - chr2L 7111927 intron Pvf3 - chr2L_14_7110001 chr2L_7110001 RAL-853_125b 276 chr2L 7121758 7121823 chr2L 7121911 7121976 16 153 32.5 32.0 32.2 0.5 218 chr2L 7121758 intron Pvf3 - chr2L 7121867 intron Pvf3 - chr2L 7121976 intron Pvf3 - chr2L_16_7120001 chr2L_7120001 RAL-853_125b 277 chr2L 7125753 7125792 chr2L 7125919 7125958 5 166 17.0 18.0 17.5 0.3 205 chr2L 7125753 intron Pvf3 - chr2L 7125856 intron Pvf3 - chr2L 7125958 intron Pvf3 - chr2L_5_7125001 chr2L_7125001 RAL-853_125b 278 chr2L 7126819 7126844 chr2L 7126948 7126973 8 129 12.5 0.0 6.2 1.1 154 chr2L 7126819 intron Pvf3 - chr2L 7126896 intron Pvf3 - chr2L 7126973 intron Pvf3 - chr2L_8_7125001 chr2L_7125001 RAL-853_125b 279 chr2L 7149944 7149955 chr2L 7150094 7150105 4 150 16.0 8.5 12.2 0.3 161 chr2L 7149944 intron Pvf3 - chr2L 7150024 intron Pvf3 - chr2L 7150105 intron Pvf3 - chr2L_4_7150001 chr2L_7150001 RAL-853_125b 280 chr2L 7149956 7149979 chr2L 7150091 7150129 7 148 13.5 8.5 11.0 0.6 173 chr2L 7149956 intron Pvf3 - chr2L 7150042 intron Pvf3 - chr2L 7150129 intron Pvf3 - chr2L_7_7150001 chr2L_7150001 RAL-853_125b 281 chr2L 7169648 7169693 chr2L 7169805 7169849 8 157 14.5 7.5 11.0 0.7 201 chr2L 7169648 intergenic not near genes chr2L 7169748 intergenic not near genes chr2L 7169849 intergenic not near genes chr2L_8_7165001 chr2L_7165001 RAL-853_125b 282 chr2L 7179083 7179110 chr2L 7179217 7179244 5 134 36.5 38.0 37.2 0.1 161 chr2L 7179083 intergenic not near genes chr2L 7179164 intergenic not near genes chr2L 7179244 intergenic not near genes chr2L_5_7175001 chr2L_7175001 RAL-853_125b 283 chr2L 7216799 7216837 chr2L 7216925 7216962 15 125 10.5 8.5 9.5 1.4 163 chr2L 7216799 intron CG13784 - chr2L 7216880 intron CG13784 - chr2L 7216962 intron CG13784 - chr2L_15_7215001 chr2L_7215001 RAL-853_125b 284 chr2L 7217195 7217267 chr2L 7217350 7217414 25 153 6.5 6.0 6.2 3.5 219 chr2L 7217195 intron CG13784 - chr2L 7217304 intron CG13784 - chr2L 7217414 intron CG13784 - chr2L_25_7215001 chr2L_7215001 RAL-853_125b 285 chr2L 7244701 7244739 chr2L 7244869 7244914 8 174 30.5 30.5 30.5 0.3 213 chr2L 7244701 intron Ndae1 - chr2L 7244808 intron Ndae1 - chr2L 7244914 intron Ndae1 - chr2L_8_7240001 chr2L_7240001 RAL-853_125b 286 chr2L 7254517 7254523 chr2L 7254645 7254651 4 128 9.5 20.5 15.0 0.2 134 chr2L 7254517 intergenic not near genes chr2L 7254584 intergenic not near genes chr2L 7254651 intergenic not near genes chr2L_4_7250001 chr2L_7250001 RAL-853_125b 287 chr2L 7295964 7296020 chr2L 7296141 7296208 5 186 26.0 26.5 26.2 0.2 244 chr2L 7295964 intergenic not near genes chr2L 7296086 intergenic not near genes chr2L 7296208 intergenic not near genes chr2L_5_7295001 chr2L_7295001 RAL-853_125b 288 chr2L 7325873 7325936 chr2L 7326008 7326071 13 134 8.0 6.0 7.0 1.6 198 chr2L 7325873 intergenic not near genes chr2L 7325972 intergenic not near genes chr2L 7326071 intergenic not near genes chr2L_13_7325001 chr2L_7325001 RAL-853_125b 289 chr2L 7335159 7335228 chr2L 7335306 7335375 13 147 21.5 19.0 20.2 0.6 216 chr2L 7335159 intron Wnt6 + chr2L 7335267 intron Wnt6 + chr2L 7335375 intron Wnt6 + chr2L_13_7335001 chr2L_7335001 RAL-853_125b 290 chr2L 7343286 7343345 chr2L 7350452 7350500 roo 17 7161 7.5 4.5 6.0 2.4 7214 chr2L 7343286 intron Wnt6 + chr2L 7346893 intron Wnt6 + chr2L 7350500 intron Wnt6 + chr2L_17_7345001 chr2L_7345001 RAL-853_125b 291 chr2L 7370747 7370784 chr2L 7370902 7370939 4 155 12.0 6.0 9.0 0.4 192 chr2L 7370747 intron Wnt10 + chr2L 7370843 intron Wnt10 + chr2L 7370939 intron Wnt10 + chr2L_4_7370001 chr2L_7370001 RAL-853_125b 292 chr2L 7375758 7375828 chr2L 7375921 7375991 14 161 16.5 13.0 14.8 0.9 233 chr2L 7375758 exon Wnt10 + chr2L 7375874 intron Wnt10 + chr2L 7375991 intron Wnt10 + chr2L_14_7375001 chr2L_7375001 RAL-853_125b 293 chr2L 7437146 7437204 chr2L 7437276 7437334 6 130 19.0 22.5 20.8 0.3 188 chr2L 7437146 intergenic CG5973 + chr2L 7437240 intergenic CG5973 + chr2L 7437334 intergenic CG5973 + chr2L_6_7435001 chr2L_7435001 RAL-853_125b 294 chr2L 5904539 5904540 chr2L 7466148 7466149 9 1561609 32.5 33.0 32.8 0.3 1561610 chr2L 5904539 intron CG9021 - chr2L 6685344 exon CG11327 - chr2L 7466149 intergenic CG6055 + chr2L_9_6685001 chr2L_6685001 RAL-853_125b 295 chr2L 7489658 7489702 chr2L 7489797 7489841 5 139 25.5 21.5 23.5 0.2 183 chr2L 7489658 intron Ziz - chr2L 7489750 intron Ziz - chr2L 7489841 intron Ziz - chr2L_5_7485001 chr2L_7485001 RAL-853_125b 296 chr2L 7502718 7502761 chr2L 7502819 7502851 7 108 18.5 25.0 21.8 0.3 133 chr2L 7502718 intron RapGAP1 - chr2L 7502784 intron RapGAP1 - chr2L 7502851 intron RapGAP1 - chr2L_7_7500001 chr2L_7500001 RAL-853_125b 297 chr2L 7555191 7555234 chr2L 7555318 7555361 15 126 8.0 13.0 10.5 1.3 170 chr2L 7555191 intron RapGAP1 - chr2L 7555276 intron RapGAP1 - chr2L 7555361 intron RapGAP1 - chr2L_15_7555001 chr2L_7555001 RAL-853_125b 298 chr2L 7562132 7562193 chr2L 7562262 7562323 13 130 12.0 10.0 11.0 1.1 191 chr2L 7562132 intron RapGAP1 - chr2L 7562228 intron RapGAP1 - chr2L 7562323 intron RapGAP1 - chr2L_13_7560001 chr2L_7560001 RAL-853_125b 299 chr2L 7567440 7567514 chr2L 7567567 7567641 43 126 11.0 11.0 11.0 3.6 201 chr2L 7567440 intron RapGAP1 - chr2L 7567540 intron RapGAP1 - chr2L 7567641 intron RapGAP1 - chr2L_43_7565001 chr2L_7565001 RAL-853_125b 300 chr2L 7579172 7579232 chr2L 7579413 7579461 BS 6 245 6.0 0.5 3.2 1.4 289 chr2L 7579172 intergenic RapGAP1 - chr2L 7579316 intergenic RapGAP1 - chr2L 7579461 intergenic RapGAP1 - chr2L_6_7575001 chr2L_7575001 RAL-853_125b 301 chr2L 7621108 7621120 chr2L 7621383 7621410 5 286 22.0 10.0 16.0 0.3 302 chr2L 7621108 intergenic not near genes chr2L 7621259 intergenic not near genes chr2L 7621410 intergenic not near genes chr2L_5_7620001 chr2L_7620001 RAL-853_125b 302 chr2L 7621772 7621820 chr2L 7621914 7621962 10 142 11.0 18.0 14.5 0.6 190 chr2L 7621772 intergenic not near genes chr2L 7621867 intergenic not near genes chr2L 7621962 intergenic not near genes chr2L_10_7620001 chr2L_7620001 RAL-853_125b 303 chr2L 7629118 7629168 chr2L 7629255 7629305 19 137 18.5 18.0 18.2 1.0 187 chr2L 7629118 intergenic not near genes chr2L 7629212 intergenic not near genes chr2L 7629305 intergenic not near genes chr2L_19_7625001 chr2L_7625001 RAL-853_125b 304 chr2L 7630647 7630670 chr2L 7630779 7630802 4 132 30.0 27.0 28.5 0.1 155 chr2L 7630647 intergenic not near genes chr2L 7630724 intergenic not near genes chr2L 7630802 intergenic not near genes chr2L_4_7630001 chr2L_7630001 RAL-853_125b 305 chr2L 7636235 7636290 chr2L 7636624 7636690 15 398 30.5 17.5 24.0 0.6 455 chr2L 7636235 5` UTR CR44799 + chr2L 7636462 5` UTR CR44799 + chr2L 7636690 intergenic CR44799 +,CR44800 + chr2L_15_7635001 chr2L_7635001 RAL-853_125b 306 chr2L 7640376 7640421 chr2L 7640512 7640557 16 134 5.5 6.0 5.8 2.4 181 chr2L 7640376 intergenic not near genes chr2L 7640466 intergenic not near genes chr2L 7640557 intergenic not near genes chr2L_16_7640001 chr2L_7640001 RAL-853_125b 307 chr2L 7649976 7650045 chr2L 7650102 7650183 12 131 9.5 5.5 7.5 1.4 207 chr2L 7649976 intron Slob - chr2L 7650080 intron Slob - chr2L 7650183 intron Slob - chr2L_12_7650001 chr2L_7650001 RAL-853_125b 308 chr2L 7702487 7702563 chr2L 7702629 7702705 10 142 11.0 12.0 11.5 0.8 218 chr2L 7702487 intergenic Tep3 + chr2L 7702596 intergenic Tep3 + chr2L 7702705 intergenic Tep3 + chr2L_10_7700001 chr2L_7700001 RAL-853_125b 309 chr2L 7704667 7704724 chr2L 7704855 7704912 18 188 14.0 17.0 15.5 1.1 245 chr2L 7704667 intron Tep3 + chr2L 7704790 intron Tep3 + chr2L 7704912 intron Tep3 + chr2L_18_7700001 chr2L_7700001 RAL-853_125b 310 chr2L 7748640 7748710 chr2L 7748787 7748858 20 144 13.5 14.0 13.8 1.4 218 chr2L 7748640 intergenic not near genes chr2L 7748749 intergenic not near genes chr2L 7748858 intergenic not near genes chr2L_20_7745001 chr2L_7745001 RAL-853_125b 311 chr2L 7766583 7766660 chr2L 7766704 7766786 17 121 8.0 5.5 6.8 2.2 203 chr2L 7766583 intergenic not near genes chr2L 7766684 intergenic not near genes chr2L 7766786 intergenic not near genes chr2L_17_7765001 chr2L_7765001 RAL-853_125b 312 chr2L 7770034 7770109 chr2L 7770215 7770290 13 181 6.0 8.0 7.0 1.6 256 chr2L 7770034 intron CG7191 + chr2L 7770162 intron CG7191 + chr2L 7770290 intron CG7191 + chr2L_13_7770001 chr2L_7770001 RAL-853_125b 313 chr2L 7826242 7826272 chr2L 7826776 7826807 11 529 63.0 48.0 55.5 0.2 565 chr2L 7826242 exon Rack1 - chr2L 7826524 intron Rack1 - chr2L 7826807 exon Rack1 - chr2L_11_7825001 chr2L_7825001 RAL-853_125b 314 chr2L 7826278 7826316 chr2L 7826774 7826819 17 513 49.5 48.5 49.0 0.3 541 chr2L 7826278 exon Rack1 - chr2L 7826548 intron Rack1 - chr2L 7826819 exon Rack1 - chr2L_17_7825001 chr2L_7825001 RAL-853_125b 315 chr2L 7826889 7826920 chr2L 7827071 7827076 4 172 58.0 53.5 55.8 0.1 187 chr2L 7826889 exon Rack1 - chr2L 7826982 intron Rack1 - chr2L 7827076 exon Rack1 - chr2L_4_7825001 chr2L_7825001 RAL-853_125b 316 chr2L 7826922 7826955 chr2L 7827064 7827137 22 163 52.5 51.0 51.8 0.4 215 chr2L 7826922 exon Rack1 - chr2L 7827030 intron Rack1 - chr2L 7827137 exon Rack1 - chr2L_22_7825001 chr2L_7825001 RAL-853_125b 317 chr2L 7867532 7867578 chr2L 7867676 7867722 7 144 22.5 17.5 20.0 0.3 190 chr2L 7867532 intron Proc - chr2L 7867627 intron Proc - chr2L 7867722 intron Proc - chr2L_7_7865001 chr2L_7865001 RAL-853_125b 318 chr2L 7871925 7871968 chr2L 7872063 7872106 12 138 14.0 20.0 17.0 0.7 181 chr2L 7871925 intergenic CR45364 -,Proc - chr2L 7872016 3` UTR CR45364 - chr2L 7872106 3` UTR CR45364 - chr2L_12_7870001 chr2L_7870001 RAL-853_125b 319 chr2L 7941149 7941192 chr2L 7941278 7941321 9 128 11.0 12.5 11.8 0.7 172 chr2L 7941149 intron Snoo - chr2L 7941235 intron Snoo - chr2L 7941321 intron Snoo - chr2L_9_7940001 chr2L_7940001 RAL-853_125b 320 chr2L 7959000 7959064 chr2L 7960461 7960527 pogo 22 1461 9.0 10.0 9.5 2.1 1527 chr2L 7959000 intron Snoo - chr2L 7959764 intron Snoo - chr2L 7960527 intron Snoo - chr2L_22_7955001 chr2L_7955001 RAL-853_125b 321 chr2L 7965502 7965573 chr2L 7965635 7965706 15 124 11.0 10.0 10.5 1.3 204 chr2L 7965502 intron Snoo - chr2L 7965604 intron Snoo - chr2L 7965706 intron Snoo - chr2L_15_7965001 chr2L_7965001 RAL-853_125b 322 chr2L 7973023 7973083 chr2L 7973214 7973274 18 191 8.5 12.5 10.5 1.6 251 chr2L 7973023 intron Snoo - chr2L 7973148 intron Snoo - chr2L 7973274 intron Snoo - chr2L_18_7970001 chr2L_7970001 RAL-853_125b 323 chr2L 7977047 7977103 chr2L 7984070 7984105 297 11 7018 6.5 6.0 6.2 1.5 7058 chr2L 7977047 intron Snoo - chr2L 7980576 intron Snoo - chr2L 7984105 intron,5` UTR Snoo -,CG7231 + chr2L_11_7980001 chr2L_7980001 RAL-853_125b 324 chr2L 7986878 7986918 chr2L 7987014 7987055 12 137 4.0 10.0 7.0 1.5 177 chr2L 7986878 3` UTR pes - chr2L 7986966 3` UTR pes - chr2L 7987055 3` UTR pes - chr2L_12_7985001 chr2L_7985001 RAL-853_125b 325 chr2L 8013574 8013584 chr2L 8018828 8018838 copia 6 5254 12.5 0.0 6.2 0.8 5264 chr2L 8013574 intron Tg + chr2L 8016206 intron Tg + chr2L 8018838 intron Tg + chr2L_6_8015001 chr2L_8015001 RAL-853_125b 326 chr2L 8013609 8013634 chr2L 8023595 8023620 copia 11 9986 7.5 9.0 8.2 1.2 10011 chr2L 8013609 intron Tg + chr2L 8018614 intron Tg + chr2L 8023620 intron Tg + chr2L_11_8015001 chr2L_8015001 RAL-853_125b 327 chr2L 8013636 8013643 chr2L 8023589 8023629 copia 5 9979 7.5 8.0 7.8 0.6 9993 chr2L 8013636 intron Tg + chr2L 8018632 intron Tg + chr2L 8023629 intron Tg + chr2L_5_8015001 chr2L_8015001 RAL-853_125b 328 chr2L 8032979 8033056 chr2L 8033123 8033200 27 139 14.0 15.0 14.5 1.7 221 chr2L 8032979 intron,intron CG7367 -,Cka + chr2L 8033090 intron,intron CG7367 -,Cka + chr2L 8033200 intron,intron CG7367 -,Cka + chr2L_27_8030001 chr2L_8030001 RAL-853_125b 329 chr2L 8034564 8034593 chr2L 8034715 8034744 7 151 14.0 20.0 17.0 0.4 180 chr2L 8034564 intron,intron CG7367 -,Cka + chr2L 8034654 intron,intron CG7367 -,Cka + chr2L 8034744 intron,intron CG7367 -,Cka + chr2L_7_8030001 chr2L_8030001 RAL-853_125b 330 chr2L 8085257 8085326 chr2L 8085497 8085566 19 240 17.5 17.0 17.2 1.0 309 chr2L 8085257 intron Bsg + chr2L 8085412 intron Bsg + chr2L 8085566 intron Bsg + chr2L_19_8085001 chr2L_8085001 RAL-853_125b 331 chr2L 8164543 8164595 chr2L 8164675 8164727 5 132 33.5 34.0 33.8 0.1 184 chr2L 8164543 intron Piezo + chr2L 8164635 intron Piezo + chr2L 8164727 intron Piezo + chr2L_5_8160001 chr2L_8160001 RAL-853_125b 332 chr2L 8167665 8167688 chr2L 8167794 8167817 11 127 24.5 15.0 19.8 0.5 152 chr2L 8167665 intron Piezo + chr2L 8167741 intron Piezo + chr2L 8167817 intron Piezo + chr2L_11_8165001 chr2L_8165001 RAL-853_125b 333 chr2L 8167694 8167725 chr2L 8167788 8167854 9 123 23.0 13.5 18.2 0.5 160 chr2L 8167694 intron Piezo + chr2L 8167774 intron Piezo + chr2L 8167854 intron Piezo + chr2L_9_8165001 chr2L_8165001 RAL-853_125b 334 chr2L 8231891 8232020 chr2L 8232024 8232148 7 150 10.5 12.0 11.2 0.6 257 chr2L 8231891 intron Pvr - chr2L 8232020 intron Pvr - chr2L 8232148 intron Pvr - chr2L_7_8230001 chr2L_8230001 RAL-853_125b 335 chr2L 8244682 8244748 chr2L 8244854 8244920 22 170 4.0 11.0 7.5 2.6 238 chr2L 8244682 intron CG8086 - chr2L 8244801 intron CG8086 - chr2L 8244920 intron CG8086 - chr2L_22_8240001 chr2L_8240001 RAL-853_125b 336 chr2L 8271569 8271635 chr2L 8271695 8271761 13 124 3.0 4.5 3.8 2.7 192 chr2L 8271569 intron Btk29A - chr2L 8271665 intron Btk29A - chr2L 8271761 intron Btk29A - chr2L_13_8270001 chr2L_8270001 RAL-853_125b 337 chr2L 8284969 8285035 chr2L 8285095 8285161 15 126 15.0 13.5 14.2 1.0 192 chr2L 8284969 intron Btk29A - chr2L 8285065 intron Btk29A - chr2L 8285161 intron Btk29A - chr2L_15_8285001 chr2L_8285001 RAL-853_125b 338 chr2L 8285382 8285442 chr2L 8285517 8285583 13 136 16.5 21.0 18.8 0.7 201 chr2L 8285382 intron Btk29A - chr2L 8285482 intron Btk29A - chr2L 8285583 intron Btk29A - chr2L_13_8285001 chr2L_8285001 RAL-853_125b 339 chr2L 8286254 8286260 chr2L 8286391 8286397 5 137 19.5 18.0 18.8 0.3 143 chr2L 8286254 intron Btk29A - chr2L 8286326 intron Btk29A - chr2L 8286397 intron Btk29A - chr2L_5_8285001 chr2L_8285001 RAL-853_125b 340 chr2L 8286263 8286312 chr2L 8286380 8286449 13 133 18.0 17.5 17.8 0.7 186 chr2L 8286263 intron Btk29A - chr2L 8286356 intron Btk29A - chr2L 8286449 intron Btk29A - chr2L_13_8285001 chr2L_8285001 RAL-853_125b 341 chr2L 8288630 8288688 chr2L 8288775 8288834 7 145 24.0 24.0 24.0 0.3 204 chr2L 8288630 intron Btk29A - chr2L 8288732 intron Btk29A - chr2L 8288834 intron Btk29A - chr2L_7_8285001 chr2L_8285001 RAL-853_125b 342 chr2L 8336894 8336936 chr2L 8337023 8337065 6 128 0.0 6.0 3.0 1.5 171 chr2L 8336894 intergenic not near genes chr2L 8336980 intergenic not near genes chr2L 8337065 intergenic not near genes chr2L_6_8335001 chr2L_8335001 RAL-853_125b 343 chr2L 8452355 8452444 chr2L 8461589 8461665 roo 30 9224 0.5 11.5 6.0 4.3 9310 chr2L 8452355 intron fu12 - chr2L 8457010 intron fu12 - chr2L 8461665 intron fu12 - chr2L_30_8455001 chr2L_8455001 RAL-853_125b 344 chr2L 8502623 8502680 chr2L 8502757 8502814 21 134 12.0 8.0 10.0 1.9 191 chr2L 8502623 intron Dh31 - chr2L 8502718 intron Dh31 - chr2L 8502814 intron Dh31 - chr2L_21_8500001 chr2L_8500001 RAL-853_125b 345 chr2L 8538119 8538129 chr2L 8538245 8538255 6 126 20.0 1.0 10.5 0.5 136 chr2L 8538119 intron CG17834 + chr2L 8538187 intron CG17834 + chr2L 8538255 intron CG17834 + chr2L_6_8535001 chr2L_8535001 RAL-853_125b 346 chr2L 8594425 8594482 chr2L 8601529 8601586 297 6 7104 11.5 10.5 11.0 0.5 7161 chr2L 8594425 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598006 intron Sema-1a + chr2L 8601586 intron Sema-1a + chr2L_6_8595001 chr2L_8595001 RAL-853_125b 347 chr2L 8612768 8612796 chr2L 8613043 8613064 16 272 20.0 1.5 10.8 1.4 296 chr2L 8612768 intron Sema-1a + chr2L 8612916 intron Sema-1a + chr2L 8613064 intron Sema-1a + chr2L_16_8610001 chr2L_8610001 RAL-853_125b 348 chr2L 8612812 8612843 chr2L 8613062 8613118 13 271 8.0 1.5 4.8 2.2 306 chr2L 8612812 intron Sema-1a + chr2L 8612965 intron Sema-1a + chr2L 8613118 intron Sema-1a + chr2L_13_8610001 chr2L_8610001 RAL-853_125b 349 chr2L 8676143 8676149 chr2L 8676390 8676396 5 247 33.0 14.0 23.5 0.2 253 chr2L 8676143 exon Glt + chr2L 8676270 exon Glt + chr2L 8676396 exon Glt + chr2L_5_8675001 chr2L_8675001 RAL-853_125b 350 chr2L 8676150 8676188 chr2L 8676389 8676435 25 244 17.5 14.0 15.8 1.5 285 chr2L 8676150 exon Glt + chr2L 8676292 exon Glt + chr2L 8676435 exon Glt + chr2L_25_8675001 chr2L_8675001 RAL-853_125b 351 chr2L 8676191 8676215 chr2L 8676384 8676433 14 230 11.0 12.5 11.8 1.1 242 chr2L 8676191 exon Glt + chr2L 8676312 exon Glt + chr2L 8676433 exon Glt + chr2L_14_8675001 chr2L_8675001 RAL-853_125b 352 chr2L 8723071 8723137 chr2L 8731498 8731564 Tirant 29 8426 13.0 9.0 11.0 2.4 8493 chr2L 8723071 intron raw - chr2L 8727318 intron raw - chr2L 8731564 intron raw - chr2L_29_8725001 chr2L_8725001 RAL-853_125b 353 chr2L 8736220 8736256 chr2L 8736350 8736386 8 130 0.0 4.0 2.0 2.7 166 chr2L 8736220 intron raw - chr2L 8736303 intron raw - chr2L 8736386 intron raw - chr2L_8_8735001 chr2L_8735001 RAL-853_125b 354 chr2L 8777128 8777147 chr2L 8777606 8777625 7 478 0.5 2.0 1.2 3.2 497 chr2L 8777128 intergenic not near genes chr2L 8777376 intergenic CG9468 - chr2L 8777625 intergenic CG9468 - chr2L_7_8775001 chr2L_8775001 RAL-853_125b 355 chr2L 8784656 8784720 chr2L 8784817 8784881 25 159 6.5 5.5 6.0 3.6 225 chr2L 8784656 intergenic not near genes chr2L 8784768 intergenic not near genes chr2L 8784881 intergenic not near genes chr2L_25_8780001 chr2L_8780001 RAL-853_125b 356 chr2L 8789281 8789322 chr2L 8789388 8789437 7 117 11.0 10.5 10.8 0.6 156 chr2L 8789281 intergenic not near genes chr2L 8789359 intergenic not near genes chr2L 8789437 intergenic not near genes chr2L_7_8785001 chr2L_8785001 RAL-853_125b 357 chr2L 8791273 8791305 chr2L 8791400 8791432 6 127 9.5 4.0 6.8 0.8 159 chr2L 8791273 intergenic not near genes chr2L 8791352 intergenic not near genes chr2L 8791432 intergenic not near genes chr2L_6_8790001 chr2L_8790001 RAL-853_125b 358 chr2L 8799758 8799822 chr2L 8799924 8799988 35 163 9.0 10.5 9.8 3.2 230 chr2L 8799758 intergenic not near genes chr2L 8799873 intergenic not near genes chr2L 8799988 intergenic not near genes chr2L_35_8795001 chr2L_8795001 RAL-853_125b 359 chr2L 8799824 8799825 chr2L 8799920 8799991 5 151 7.5 9.5 8.5 0.5 167 chr2L 8799824 intergenic not near genes chr2L 8799908 intergenic not near genes chr2L 8799991 intergenic not near genes chr2L_5_8795001 chr2L_8795001 RAL-853_125b 360 chr2L 9000237 9000313 chr2L 9007797 9007899 roo 41 7563 8.0 0.5 4.2 7.9 7662 chr2L 9000237 intergenic Try29F + chr2L 9004068 intergenic not near genes chr2L 9007899 intergenic not near genes chr2L_41_9000001 chr2L_9000001 RAL-853_125b 361 chr2L 9023115 9023181 chr2L 9023258 9023328 31 146 10.0 8.0 9.0 3.1 213 chr2L 9023115 intergenic not near genes chr2L 9023222 intergenic not near genes chr2L 9023328 intergenic not near genes chr2L_31_9020001 chr2L_9020001 RAL-853_125b 362 chr2L 9027941 9027978 chr2L 9028075 9028112 7 134 8.0 0.0 4.0 1.4 171 chr2L 9027941 intron,intron CG9582 -,CR44352 - chr2L 9028026 intron,intron CG9582 -,CR44352 - chr2L 9028112 intron,intron CG9582 -,CR44352 - chr2L_7_9025001 chr2L_9025001 RAL-853_125b 363 chr2L 9039990 9040054 chr2L 9040116 9040191 27 136 6.0 7.0 6.5 3.6 201 chr2L 9039990 intergenic not near genes chr2L 9040090 intergenic not near genes chr2L 9040191 intergenic not near genes chr2L_27_9040001 chr2L_9040001 RAL-853_125b 364 chr2L 9044053 9044105 chr2L 9044201 9044253 15 148 7.0 7.0 7.0 1.9 200 chr2L 9044053 intergenic not near genes chr2L 9044153 intergenic not near genes chr2L 9044253 intergenic not near genes chr2L_15_9040001 chr2L_9040001 RAL-853_125b 365 chr2L 9053362 9053410 chr2L 9053647 9053695 13 285 10.0 6.0 8.0 1.4 333 chr2L 9053362 exon CG31708 - chr2L 9053528 intron CG31708 - chr2L 9053695 intron CG31708 - chr2L_13_9050001 chr2L_9050001 RAL-853_125b 366 chr2L 9069634 9069670 chr2L 9069775 9069811 8 141 0.0 6.5 3.2 1.9 177 chr2L 9069634 intron CG31708 - chr2L 9069722 intron CG31708 - chr2L 9069811 intron CG31708 - chr2L_8_9065001 chr2L_9065001 RAL-853_125b 367 chr2L 9084336 9084340 chr2L 16217660 16217660 19 7133321 29.0 39.0 34.0 0.5 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_19_12650001 chr2L_12650001 RAL-853_125b 368 chr2L 9202026 9202079 chr2L 9202139 9202189 6 116 15.5 11.5 13.5 0.4 163 chr2L 9202026 intron tai + chr2L 9202108 intron tai + chr2L 9202189 intron tai + chr2L_6_9200001 chr2L_9200001 RAL-853_125b 369 chr2L 9217945 9218004 chr2L 9222782 9222849 Doc 11 4843 3.0 0.5 1.8 3.9 4904 chr2L 9217945 intron tai + chr2L 9220397 intron tai + chr2L 9222849 intron tai + chr2L_11_9220001 chr2L_9220001 RAL-853_125b 370 chr2L 9225827 9225876 chr2L 9225967 9226016 15 140 7.5 9.5 8.5 1.6 189 chr2L 9225827 intron tai + chr2L 9225922 intron tai + chr2L 9226016 intron tai + chr2L_15_9225001 chr2L_9225001 RAL-853_125b 371 chr2L 9234894 9234927 chr2L 9235026 9235059 12 131 0.0 17.5 8.8 1.2 165 chr2L 9234894 intron tai + chr2L 9234976 intron tai + chr2L 9235059 intron tai + chr2L_12_9230001 chr2L_9230001 RAL-853_125b 372 chr2L 9251097 9251170 chr2L 9251244 9251317 33 146 6.0 4.0 5.0 5.5 220 chr2L 9251097 intergenic aust -,borr - chr2L 9251207 intergenic aust -,borr - chr2L 9251317 intergenic borr -,aust - chr2L_33_9250001 chr2L_9250001 RAL-853_125b 373 chr2L 9279955 9280015 chr2L 9280093 9280159 12 143 6.0 4.5 5.2 1.9 204 chr2L 9279955 intron Ggamma30A + chr2L 9280057 intron Ggamma30A + chr2L 9280159 intron Ggamma30A + chr2L_12_9280001 chr2L_9280001 RAL-853_125b 374 chr2L 9283157 9283180 chr2L 9283284 9283307 13 126 17.5 9.5 13.5 0.9 150 chr2L 9283157 intron Ggamma30A + chr2L 9283232 intron Ggamma30A + chr2L 9283307 intron Ggamma30A + chr2L_13_9280001 chr2L_9280001 RAL-853_125b 375 chr2L 9297331 9297398 chr2L 9297458 9297525 31 127 9.0 9.0 9.0 3.1 194 chr2L 9297331 3` UTR Ggamma30A + chr2L 9297428 3` UTR Ggamma30A + chr2L 9297525 3` UTR Ggamma30A + chr2L_31_9295001 chr2L_9295001 RAL-853_125b 376 chr2L 9313654 9313719 chr2L 9313789 9313842 15 134 4.0 10.5 7.2 1.8 188 chr2L 9313654 intergenic not near genes chr2L 9313748 intergenic not near genes chr2L 9313842 intergenic not near genes chr2L_15_9310001 chr2L_9310001 RAL-853_125b 377 chr2L 9322764 9322833 chr2L 9322890 9322959 27 126 8.0 10.5 9.2 2.6 195 chr2L 9322764 intergenic not near genes chr2L 9322862 intergenic not near genes chr2L 9322959 intergenic not near genes chr2L_27_9320001 chr2L_9320001 RAL-853_125b 378 chr2L 9362103 9362114 chr2L 9362231 9362242 7 128 17.0 6.5 11.8 0.5 139 chr2L 9362103 intergenic not near genes chr2L 9362172 intergenic not near genes chr2L 9362242 intergenic not near genes chr2L_7_9360001 chr2L_9360001 RAL-853_125b 379 chr2L 9362118 9362153 chr2L 9362246 9362281 14 128 5.5 10.5 8.0 1.6 163 chr2L 9362118 intergenic not near genes chr2L 9362200 intergenic not near genes chr2L 9362281 intergenic not near genes chr2L_14_9360001 chr2L_9360001 RAL-853_125b 380 chr2L 9364278 9364330 chr2L 9364427 9364472 5 148 0.0 11.0 5.5 0.8 194 chr2L 9364278 intergenic CR43404 + chr2L 9364375 intron CR43404 + chr2L 9364472 5` UTR CR43404 + chr2L_5_9360001 chr2L_9360001 RAL-853_125b 381 chr2L 9380193 9380253 chr2L 9380338 9380399 20 144 6.5 8.0 7.2 2.4 206 chr2L 9380193 exon Shawl - chr2L 9380296 intron Shawl - chr2L 9380399 intron Shawl - chr2L_20_9380001 chr2L_9380001 RAL-853_125b 382 chr2L 9393448 9393522 chr2L 9396465 9396539 jockey 26 3017 6.5 9.5 8.0 2.9 3091 chr2L 9393448 intron Shawl - chr2L 9394994 intron Shawl - chr2L 9396539 intron Shawl - chr2L_26_9390001 chr2L_9390001 RAL-853_125b 383 chr2L 9402949 9403019 chr2L 9403128 9403198 26 179 7.0 0.0 3.5 5.8 249 chr2L 9402949 intron Shawl - chr2L 9403074 intron Shawl - chr2L 9403198 intron Shawl - chr2L_26_9400001 chr2L_9400001 RAL-853_125b 384 chr2L 9407857 9407902 chr2L 9407989 9408034 13 132 5.5 9.0 7.2 1.6 177 chr2L 9407857 intron Shawl - chr2L 9407946 intron Shawl - chr2L 9408034 intron Shawl - chr2L_13_9405001 chr2L_9405001 RAL-853_125b 385 chr2L 9446258 9446295 chr2L 9446392 9446429 5 133 0.0 0.0 0.0 5.0 171 chr2L 9446258 intron numb + chr2L 9446344 intron numb + chr2L 9446429 intron numb + chr2L_5_9445001 chr2L_9445001 RAL-853_125b 386 chr2L 9454930 9455002 chr2L 9455082 9455156 30 151 8.5 4.0 6.2 4.2 226 chr2L 9454930 intron numb + chr2L 9455043 intron numb + chr2L 9455156 intron numb + chr2L_30_9455001 chr2L_9455001 RAL-853_125b 387 chr2L 9457026 9457103 chr2L 9457153 9457204 37 123 11.0 7.5 9.2 3.6 178 chr2L 9457026 intron numb + chr2L 9457115 intron numb + chr2L 9457204 intron numb + chr2L_37_9455001 chr2L_9455001 RAL-853_125b 388 chr2L 9464831 9464962 chr2L 9464959 9465096 11 143 0.0 0.0 0.0 11.0 265 chr2L 9464831 intergenic not near genes chr2L 9464964 intergenic not near genes chr2L 9465096 intergenic not near genes chr2L_11_9460001 chr2L_9460001 RAL-853_125b 389 chr2L 9486319 9486362 chr2L 9486452 9486495 12 133 10.0 0.0 5.0 2.0 176 chr2L 9486319 intergenic not near genes chr2L 9486407 intergenic not near genes chr2L 9486495 intergenic not near genes chr2L_12_9485001 chr2L_9485001 RAL-853_125b 390 chr2L 9490475 9490544 chr2L 9490603 9490674 28 129 9.0 5.5 7.2 3.4 199 chr2L 9490475 intergenic not near genes chr2L 9490574 intergenic not near genes chr2L 9490674 intergenic not near genes chr2L_28_9490001 chr2L_9490001 RAL-853_125b 391 chr2L 9496862 9496944 chr2L 9497031 9497105 19 165 3.0 8.5 5.8 2.8 243 chr2L 9496862 intron CG33298 + chr2L 9496984 intron CG33298 + chr2L 9497105 intron CG33298 + chr2L_19_9495001 chr2L_9495001 RAL-853_125b 392 chr2L 9505014 9505019 chr2L 9505147 9505152 4 133 11.0 5.0 8.0 0.4 138 chr2L 9505014 intron CG33298 + chr2L 9505083 intron CG33298 + chr2L 9505152 intron CG33298 + chr2L_4_9505001 chr2L_9505001 RAL-853_125b 393 chr2L 9612802 9612816 chr2L 9612931 9612945 7 129 0.0 0.0 0.0 7.0 143 chr2L 9612802 intergenic gcm2 +,Trx-2 + chr2L 9612874 intergenic gcm2 +,Trx-2 + chr2L 9612945 intergenic Trx-2 +,gcm2 + chr2L_7_9610001 chr2L_9610001 RAL-853_125b 394 chr2L 9719749 9719767 chr2L 9719881 9719899 4 132 1.5 6.0 3.8 0.8 150 chr2L 9719749 intron Nckx30C - chr2L 9719824 intron Nckx30C - chr2L 9719899 intron Nckx30C - chr2L_4_9715001 chr2L_9715001 RAL-853_125b 395 chr2L 9730926 9731001 chr2L 9731059 9731134 17 133 6.0 7.0 6.5 2.3 208 chr2L 9730926 intron,3` UTR Nckx30C -,CG13116 + chr2L 9731030 intron Nckx30C - chr2L 9731134 intron Nckx30C - chr2L_17_9730001 chr2L_9730001 RAL-853_125b 396 chr2L 9837382 9837443 chr2L 9837510 9837571 20 128 1.0 0.0 0.5 13.3 189 chr2L 9837382 intron nAChRalpha6 - chr2L 9837476 intron nAChRalpha6 - chr2L 9837571 intron nAChRalpha6 - chr2L_20_9835001 chr2L_9835001 RAL-853_125b 397 chr2L 9861569 9861644 chr2L 9861805 9861875 35 234 6.0 6.5 6.2 4.9 306 chr2L 9861569 intron nAChRalpha6 - chr2L 9861722 intron nAChRalpha6 - chr2L 9861875 intron nAChRalpha6 - chr2L_35_9860001 chr2L_9860001 RAL-853_125b 398 chr2L 9871474 9871521 chr2L 9871608 9871655 15 134 4.5 3.5 4.0 3.0 181 chr2L 9871474 intron nAChRalpha6 - chr2L 9871564 intron nAChRalpha6 - chr2L 9871655 intron nAChRalpha6 - chr2L_15_9870001 chr2L_9870001 RAL-853_125b 399 chr2L 9948018 9948028 chr2L 9948148 9948158 5 130 0.0 12.0 6.0 0.7 140 chr2L 9948018 intergenic CG5853 - chr2L 9948088 intergenic CG5853 - chr2L 9948158 intergenic not near genes chr2L_5_9945001 chr2L_9945001 RAL-853_125b 400 chr2L 9973685 9973754 chr2L 9980849 9980906 HMS-Beagle 37 7164 5.0 9.0 7.0 4.6 7221 chr2L 9973685 intergenic not near genes chr2L 9977296 intergenic not near genes chr2L 9980906 intergenic not near genes chr2L_37_9975001 chr2L_9975001 RAL-853_125b 401 chr2L 9981989 9982228 chr2L 9982118 9982381 7 146 0.0 0.0 0.0 7.0 392 chr2L 9981989 intergenic not near genes chr2L 9982185 intergenic not near genes chr2L 9982381 intergenic not near genes chr2L_7_9980001 chr2L_9980001 RAL-853_125b 402 chr2L 10051677 10051682 chr2L 10051812 10051817 5 135 24.5 8.0 16.2 0.3 140 chr2L 10051677 5` UTR CR44874 + chr2L 10051747 5` UTR CR44874 + chr2L 10051817 5` UTR CR44874 + chr2L_5_10050001 chr2L_10050001 RAL-853_125b 403 chr2L 10051691 10051746 chr2L 10051810 10051869 36 127 9.5 7.5 8.5 3.8 178 chr2L 10051691 5` UTR CR44874 + chr2L 10051780 5` UTR CR44874 + chr2L 10051869 5` UTR CR44874 + chr2L_36_10050001 chr2L_10050001 RAL-853_125b 404 chr2L 10112351 10112370 chr2L 10114560 10114579 5 2209 7.5 10.0 8.8 0.5 2228 chr2L 10112351 intron,intron CG44153 -,CG34109 + chr2L 10113465 intron,intron CG44153 -,CG34109 + chr2L 10114579 intron,intron CG44153 -,CG34109 + chr2L_5_10110001 chr2L_10110001 RAL-853_125b 405 chr2L 10122939 10123008 chr2L 10123078 10123147 24 138 4.5 4.0 4.2 4.6 208 chr2L 10122939 intron,intron CG44153 -,CG34109 + chr2L 10123043 intron,intron CG44153 -,CG34109 + chr2L 10123147 intron,intron CG44153 -,CG34109 + chr2L_24_10120001 chr2L_10120001 RAL-853_125b 406 chr2L 10138145 10138184 chr2L 10143439 10143471 Rt1c 15 5292 8.5 9.5 9.0 1.5 5326 chr2L 10138145 intron CG44153 - chr2L 10140808 intron CG44153 - chr2L 10143471 intron CG44153 - chr2L_15_10140001 chr2L_10140001 RAL-853_125b 407 chr2L 10147152 10147223 chr2L 10147279 10147350 28 126 6.5 6.5 6.5 3.7 198 chr2L 10147152 intron,exon CG44153 -,CG4839 + chr2L 10147251 intron,intron CG44153 -,CG4839 + chr2L 10147350 intron,intron CG44153 -,CG4839 + chr2L_28_10145001 chr2L_10145001 RAL-853_125b 408 chr2L 10155279 10155303 chr2L 10155402 10155433 12 129 14.0 7.0 10.5 1.0 154 chr2L 10155279 intron,3` UTR CG44153 -,CG4839 + chr2L 10155356 intron,3` UTR CG44153 -,CG4839 + chr2L 10155433 intron,3` UTR CG44153 -,CG4839 + chr2L_12_10155001 chr2L_10155001 RAL-853_125b 409 chr2L 10155307 10155344 chr2L 10155401 10155474 14 127 9.5 6.5 8.0 1.6 167 chr2L 10155307 intron,3` UTR CG44153 -,CG4839 + chr2L 10155390 intron,3` UTR CG44153 -,CG4839 + chr2L 10155474 intron,3` UTR CG44153 -,CG4839 + chr2L_14_10155001 chr2L_10155001 RAL-853_125b 410 chr2L 10156283 10156350 chr2L 10163803 10163866 blood 23 7517 9.0 5.0 7.0 2.9 7583 chr2L 10156283 intron,3` UTR CG44153 -,CG4839 + chr2L 10160074 intron CG44153 - chr2L 10163866 intron CG44153 - chr2L_23_10160001 chr2L_10160001 RAL-853_125b 411 chr2L 10176023 10176024 chr2L 16071771 16071771 4 5895748 38.0 44.5 41.2 0.1 5895748 chr2L 10176023 intron CG44153 - chr2L 13123897 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_4_13120001 chr2L_13120001 RAL-853_125b 412 chr2L 10177356 10177388 chr2L 10177486 10177518 10 129 6.0 3.0 4.5 1.8 162 chr2L 10177356 intron CG44153 - chr2L 10177437 intron CG44153 - chr2L 10177518 intron CG44153 - chr2L_10_10175001 chr2L_10175001 RAL-853_125b 413 chr2L 10191888 10191945 chr2L 10192015 10192072 14 127 9.5 10.0 9.8 1.3 184 chr2L 10191888 intron Sur - chr2L 10191980 intron Sur - chr2L 10192072 intron Sur - chr2L_14_10190001 chr2L_10190001 RAL-853_125b 414 chr2L 10294629 10294689 chr2L 10294765 10294825 20 136 10.0 9.0 9.5 1.9 196 chr2L 10294629 exon Hand - chr2L 10294727 intron Hand - chr2L 10294825 intron Hand - chr2L_20_10290001 chr2L_10290001 RAL-853_125b 415 chr2L 10372818 10372893 chr2L 10372956 10373031 29 138 10.0 4.0 7.0 3.6 213 chr2L 10372818 exon rho-5 - chr2L 10372924 intron rho-5 - chr2L 10373031 intron rho-5 - chr2L_29_10370001 chr2L_10370001 RAL-853_125b 416 chr2L 10442928 10443011 chr2L 10443088 10443156 7 156 0.0 8.5 4.2 1.3 228 chr2L 10442928 intron loh + chr2L 10443042 intron loh + chr2L 10443156 intron loh + chr2L_7_10440001 chr2L_10440001 RAL-853_125b 417 chr2L 10458057 10458083 chr2L 10458368 10458394 14 311 11.0 1.0 6.0 2.0 337 chr2L 10458057 intron LM408 + chr2L 10458226 intron LM408 + chr2L 10458394 intron LM408 + chr2L_14_10455001 chr2L_10455001 RAL-853_125b 418 chr2L 10474341 10474407 chr2L 10474472 10474538 15 129 5.0 4.5 4.8 2.6 197 chr2L 10474341 5` UTR RluA-1 - chr2L 10474440 intergenic RluA-1 - chr2L 10474538 intergenic RluA-1 - chr2L_15_10470001 chr2L_10470001 RAL-853_125b 419 chr2L 10490233 10490283 chr2L 10490364 10490415 23 132 11.5 9.5 10.5 2.0 182 chr2L 10490233 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490324 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490415 3` UTR,3` UTR CG6144 +,CG13144 - chr2L_23_10490001 chr2L_10490001 RAL-853_125b 420 chr2L 10490286 10490302 chr2L 10490358 10490403 8 120 6.0 10.0 8.0 0.9 117 chr2L 10490286 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490344 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490403 3` UTR,3` UTR CG6144 +,CG13144 - chr2L_8_10490001 chr2L_10490001 RAL-853_125b 421 chr2L 10515313 10515388 chr2L 10515456 10515531 18 143 6.5 4.5 5.5 2.8 218 chr2L 10515313 intron,intron CG45083 -,Fatp - chr2L 10515422 intron,intron CG45083 -,Fatp - chr2L 10515531 intron,intron CG45083 -,Fatp - chr2L_18_10515001 chr2L_10515001 RAL-853_125b 422 chr2L 10531568 10531643 chr2L 10531710 10531785 18 141 0.0 11.5 5.8 2.6 217 chr2L 10531568 3` UTR Lip4 + chr2L 10531676 3` UTR Lip4 + chr2L 10531785 intergenic Lip4 +,CG18301 + chr2L_18_10530001 chr2L_10530001 RAL-853_125b 423 chr2L 10563881 10563944 chr2L 10564024 10564040 19 140 2.5 4.0 3.2 4.5 159 chr2L 10563881 intron Trim9 + chr2L 10563960 intron Trim9 + chr2L 10564040 intron Trim9 + chr2L_19_10560001 chr2L_10560001 RAL-853_125b 424 chr2L 10592813 10592856 chr2L 10600525 10600568 opus 21 7712 5.5 12.5 9.0 2.1 7755 chr2L 10592813 intron Trim9 + chr2L 10596690 intron Trim9 + chr2L 10600568 intron Trim9 + chr2L_21_10595001 chr2L_10595001 RAL-853_125b 425 chr2L 10611398 10611412 chr2L 10611525 10611539 4 126 14.5 11.5 13.0 0.3 141 chr2L 10611398 intron Trim9 + chr2L 10611468 intron Trim9 + chr2L 10611539 intron Trim9 + chr2L_4_10610001 chr2L_10610001 RAL-853_125b 426 chr2L 10611414 10611436 chr2L 10611516 10611563 16 123 12.5 11.5 12.0 1.2 149 chr2L 10611414 intron Trim9 + chr2L 10611488 intron Trim9 + chr2L 10611563 intron Trim9 + chr2L_16_10610001 chr2L_10610001 RAL-853_125b 427 chr2L 10631202 10631277 chr2L 10631343 10631424 15 143 6.0 0.0 3.0 3.8 222 chr2L 10631202 intron CG7329 - chr2L 10631313 intron CG7329 - chr2L 10631424 intron CG7329 - chr2L_15_10630001 chr2L_10630001 RAL-853_125b 428 chr2L 10704866 10704948 chr2L 10705011 10705093 22 145 9.0 4.5 6.8 2.8 227 chr2L 10704866 intron,exon Lip2 -,CG6415 + chr2L 10704980 intron Lip2 - chr2L 10705093 exon Lip2 - chr2L_22_10700001 chr2L_10700001 RAL-853_125b 429 chr2L 10723487 10723551 chr2L 10723631 10723695 14 144 6.0 4.5 5.2 2.3 208 chr2L 10723487 intergenic not near genes chr2L 10723591 intergenic not near genes chr2L 10723695 intergenic not near genes chr2L_14_10720001 chr2L_10720001 RAL-853_125b 430 chr2L 10777174 10777210 chr2L 10777335 10777368 10 157 13.5 5.5 9.5 1.0 194 chr2L 10777174 intron CG31869 - chr2L 10777271 intron CG31869 - chr2L 10777368 intron CG31869 - chr2L_10_10775001 chr2L_10775001 RAL-853_125b 431 chr2L 10787931 10788030 chr2L 10788074 10788156 12 135 0.0 0.0 0.0 12.0 225 chr2L 10787931 intron CG31869 - chr2L 10788044 intron CG31869 - chr2L 10788156 intron CG31869 - chr2L_12_10785001 chr2L_10785001 RAL-853_125b 432 chr2L 10811487 10811526 chr2L 10811609 10811658 18 128 13.5 7.5 10.5 1.6 171 chr2L 10811487 intron Nos - chr2L 10811572 intron Nos - chr2L 10811658 intron Nos - chr2L_18_10810001 chr2L_10810001 RAL-853_125b 433 chr2L 10820479 10820534 chr2L 10820612 10820668 16 133 4.5 6.0 5.2 2.6 189 chr2L 10820479 intron,3` UTR Nos -,CG6508 + chr2L 10820574 intron Nos - chr2L 10820668 intron Nos - chr2L_16_10820001 chr2L_10820001 RAL-853_125b 434 chr2L 10850110 10850170 chr2L 10850255 10850315 32 143 15.0 0.5 7.8 3.6 205 chr2L 10850110 5` UTR porin - chr2L 10850212 5` UTR,5` UTR porin -,CG43129 + chr2L 10850315 5` UTR,intron porin -,CG43129 + chr2L_32_10850001 chr2L_10850001 RAL-853_125b 435 chr2L 10852109 10852170 chr2L 10852261 10852309 9 141 0.0 8.0 4.0 1.8 200 chr2L 10852109 intron CG43129 + chr2L 10852209 intron CG43129 + chr2L 10852309 intron CG43129 + chr2L_9_10850001 chr2L_10850001 RAL-853_125b 436 chr2L 10862806 10862867 chr2L 10864464 10864531 Rt1c 20 1654 11.5 8.5 10.0 1.8 1725 chr2L 10862806 3` UTR CR43807 - chr2L 10863668 intron CR43807 - chr2L 10864531 3` UTR CR43807 - chr2L_20_10860001 chr2L_10860001 RAL-853_125b 437 chr2L 10873391 10873406 chr2L 10873611 10873626 4 220 4.0 6.0 5.0 0.7 235 chr2L 10873391 intergenic not near genes chr2L 10873508 intergenic not near genes chr2L 10873626 intergenic not near genes chr2L_4_10870001 chr2L_10870001 RAL-853_125b 438 chr2L 10912944 10913001 chr2L 10913075 10913130 21 122 14.0 10.5 12.2 1.6 186 chr2L 10912944 intergenic not near genes chr2L 10913037 intergenic not near genes chr2L 10913130 intergenic not near genes chr2L_21_10910001 chr2L_10910001 RAL-853_125b 439 chr2L 10946910 10946969 chr2L 10956174 10956234 roo 25 9263 9.0 12.0 10.5 2.2 9324 chr2L 10946910 intron dpr2 - chr2L 10951572 intron dpr2 - chr2L 10956234 intron dpr2 - chr2L_25_10950001 chr2L_10950001 RAL-853_125b 440 chr2L 11055024 11055071 chr2L 11055159 11055206 14 135 4.5 8.5 6.5 1.9 182 chr2L 11055024 intron Samuel - chr2L 11055115 intron Samuel - chr2L 11055206 intron Samuel - chr2L_14_11055001 chr2L_11055001 RAL-853_125b 441 chr2L 11152729 11152741 chr2L 11152835 11152866 8 124 0.0 19.5 9.8 0.7 137 chr2L 11152729 intron CG6287 - chr2L 11152798 intron CG6287 - chr2L 11152866 intron CG6287 - chr2L_8_11150001 chr2L_11150001 RAL-853_125b 442 chr2L 11174603 11174658 chr2L 11174718 11174785 13 119 4.5 7.5 6.0 1.9 182 chr2L 11174603 intron Ca-beta - chr2L 11174694 intron Ca-beta - chr2L 11174785 intron Ca-beta - chr2L_13_11170001 chr2L_11170001 RAL-853_125b 443 chr2L 11183740 11183805 chr2L 11183886 11183951 19 146 7.5 7.0 7.2 2.3 211 chr2L 11183740 intron Ca-beta - chr2L 11183846 intron Ca-beta - chr2L 11183951 intron Ca-beta - chr2L_19_11180001 chr2L_11180001 RAL-853_125b 444 chr2L 11198489 11198503 chr2L 11198618 11198636 6 132 0.0 13.0 6.5 0.8 147 chr2L 11198489 intron Ca-beta - chr2L 11198562 intron Ca-beta - chr2L 11198636 intron Ca-beta - chr2L_6_11195001 chr2L_11195001 RAL-853_125b 445 chr2L 11211972 11212040 chr2L 11212106 11212174 22 134 11.5 7.0 9.2 2.2 202 chr2L 11211972 intron ab + chr2L 11212073 intron ab + chr2L 11212174 intron ab + chr2L_22_11210001 chr2L_11210001 RAL-853_125b 446 chr2L 11315224 11315272 chr2L 11317678 11317719 G2 14 2452 6.5 6.5 6.5 1.9 2495 chr2L 11315224 intergenic not near genes chr2L 11316472 intergenic not near genes chr2L 11317719 intergenic not near genes chr2L_14_11315001 chr2L_11315001 RAL-853_125b 447 chr2L 11339686 11339741 chr2L 11339813 11339868 17 123 7.0 7.5 7.2 2.1 182 chr2L 11339686 intergenic not near genes chr2L 11339777 intergenic not near genes chr2L 11339868 intergenic not near genes chr2L_17_11335001 chr2L_11335001 RAL-853_125b 448 chr2L 11351733 11351767 chr2L 11351947 11351981 10 214 11.5 6.5 9.0 1.0 248 chr2L 11351733 intergenic not near genes chr2L 11351857 intergenic not near genes chr2L 11351981 intergenic not near genes chr2L_10_11350001 chr2L_11350001 RAL-853_125b 449 chr2L 11356357 11356423 chr2L 11356518 11356584 16 161 10.0 2.0 6.0 2.3 227 chr2L 11356357 intergenic not near genes chr2L 11356470 intergenic not near genes chr2L 11356584 intergenic not near genes chr2L_16_11355001 chr2L_11355001 RAL-853_125b 450 chr2L 11380598 11380634 chr2L 11380711 11380734 9 120 2.5 5.5 4.0 1.8 136 chr2L 11380598 intergenic not near genes chr2L 11380666 intergenic not near genes chr2L 11380734 intergenic not near genes chr2L_9_11380001 chr2L_11380001 RAL-853_125b 451 chr2L 11399480 11399528 chr2L 11399610 11399655 9 128 6.0 0.0 3.0 2.2 175 chr2L 11399480 intergenic not near genes chr2L 11399568 intergenic not near genes chr2L 11399655 intergenic not near genes chr2L_9_11395001 chr2L_11395001 RAL-853_125b 452 chr2L 11418613 11418682 chr2L 11418736 11418811 15 128 6.0 5.5 5.8 2.2 198 chr2L 11418613 intergenic not near genes chr2L 11418712 intergenic not near genes chr2L 11418811 intergenic not near genes chr2L_15_11415001 chr2L_11415001 RAL-853_125b 453 chr2L 11458897 11458969 chr2L 11459063 11459135 15 166 7.0 5.0 6.0 2.1 238 chr2L 11458897 intergenic not near genes chr2L 11459016 intergenic not near genes chr2L 11459135 intergenic not near genes chr2L_15_11455001 chr2L_11455001 RAL-853_125b 454 chr2L 11473277 11473345 chr2L 11473405 11473471 15 127 6.5 8.0 7.2 1.8 194 chr2L 11473277 intergenic not near genes chr2L 11473374 intergenic not near genes chr2L 11473471 intergenic not near genes chr2L_15_11470001 chr2L_11470001 RAL-853_125b 455 chr2L 11492966 11492996 chr2L 11493156 11493186 16 189 0.0 6.5 3.2 3.8 220 chr2L 11492966 intergenic not near genes chr2L 11493076 intergenic not near genes chr2L 11493186 intergenic not near genes chr2L_16_11490001 chr2L_11490001 RAL-853_125b 456 chr2L 11499679 11499740 chr2L 11499822 11499883 32 143 8.5 4.0 6.2 4.4 204 chr2L 11499679 intergenic not near genes chr2L 11499781 intergenic not near genes chr2L 11499883 intergenic not near genes chr2L_32_11495001 chr2L_11495001 RAL-853_125b 457 chr2L 11524833 11524860 chr2L 11524967 11524996 6 133 14.0 18.5 16.2 0.3 163 chr2L 11524833 exon CG31705 - chr2L 11524914 exon CG31705 - chr2L 11524996 exon CG31705 - chr2L_6_11520001 chr2L_11520001 RAL-853_125b 458 chr2L 11525655 11525724 chr2L 11525791 11525859 28 136 9.0 6.0 7.5 3.3 204 chr2L 11525655 exon CG31705 - chr2L 11525757 intron CG31705 - chr2L 11525859 intron CG31705 - chr2L_28_11525001 chr2L_11525001 RAL-853_125b 459 chr2L 11540542 11540601 chr2L 11547997 11548053 Tabor 17 7455 5.5 5.5 5.5 2.6 7511 chr2L 11540542 intergenic not near genes chr2L 11544298 intergenic not near genes chr2L 11548053 intergenic not near genes chr2L_17_11540001 chr2L_11540001 RAL-853_125b 460 chr2L 11555387 11555427 chr2L 11555556 11555596 12 169 4.0 0.0 2.0 4.0 209 chr2L 11555387 intergenic not near genes chr2L 11555492 intergenic not near genes chr2L 11555596 intergenic not near genes chr2L_12_11555001 chr2L_11555001 RAL-853_125b 461 chr2L 11563596 11563656 chr2L 11568850 11568874 copia 37 5251 10.5 6.0 8.2 4.0 5278 chr2L 11563596 intergenic not near genes chr2L 11566235 intergenic not near genes chr2L 11568874 intergenic not near genes chr2L_37_11565001 chr2L_11565001 RAL-853_125b 462 chr2L 11610503 11610576 chr2L 11610632 11610703 14 128 5.5 6.0 5.8 2.1 200 chr2L 11610503 intron kek2 + chr2L 11610603 intron,3` UTR kek2 +,spag4 - chr2L 11610703 intron,intron kek2 +,spag4 - chr2L_14_11610001 chr2L_11610001 RAL-853_125b 463 chr2L 11614014 11614046 chr2L 11615559 11615584 hopper2 8 1542 9.5 12.0 10.8 0.7 1570 chr2L 11614014 intron kek2 + chr2L 11614799 intron kek2 + chr2L 11615584 intron kek2 + chr2L_8_11610001 chr2L_11610001 RAL-853_125b 464 chr2L 11614049 11614076 chr2L 11615552 11615605 hopper2 5 1532 5.5 10.5 8.0 0.6 1556 chr2L 11614049 intron kek2 + chr2L 11614827 intron kek2 + chr2L 11615605 intron kek2 + chr2L_5_11610001 chr2L_11610001 RAL-853_125b 465 chr2L 11672092 11672164 chr2L 11672249 11672321 23 157 3.5 4.5 4.0 4.6 229 chr2L 11672092 intergenic not near genes chr2L 11672206 intergenic not near genes chr2L 11672321 intergenic not near genes chr2L_23_11670001 chr2L_11670001 RAL-853_125b 466 chr2L 11676289 11676296 chr2L 11676418 11676425 5 129 9.5 0.0 4.8 0.9 136 chr2L 11676289 intergenic not near genes chr2L 11676357 intergenic not near genes chr2L 11676425 intergenic not near genes chr2L_5_11675001 chr2L_11675001 RAL-853_125b 467 chr2L 11704591 11704667 chr2L 11704717 11704793 21 125 6.5 7.0 6.8 2.7 202 chr2L 11704591 intergenic not near genes chr2L 11704692 intergenic not near genes chr2L 11704793 intergenic not near genes chr2L_21_11700001 chr2L_11700001 RAL-853_125b 468 chr2L 11710114 11710126 chr2L 11710239 11710251 8 126 8.5 0.0 4.2 1.5 137 chr2L 11710114 intergenic not near genes chr2L 11710182 intergenic not near genes chr2L 11710251 intergenic not near genes chr2L_8_11710001 chr2L_11710001 RAL-853_125b 469 chr2L 11713462 11713530 chr2L 11720980 11721048 blood 23 7517 7.5 10.0 8.8 2.3 7586 chr2L 11713462 intergenic not near genes chr2L 11717255 intergenic not near genes chr2L 11721048 intergenic CR44143 + chr2L_23_11715001 chr2L_11715001 RAL-853_125b 470 chr2L 11770553 11770630 chr2L 11770690 11770767 37 137 9.0 10.0 9.5 3.5 214 chr2L 11770553 intergenic not near genes chr2L 11770660 intergenic not near genes chr2L 11770767 intergenic not near genes chr2L_37_11770001 chr2L_11770001 RAL-853_125b 471 chr2L 11808627 11808694 chr2L 11808753 11808779 5 111 9.0 10.5 9.8 0.5 152 chr2L 11808627 intron crol - chr2L 11808703 intron crol - chr2L 11808779 intron crol - chr2L_5_11805001 chr2L_11805001 RAL-853_125b 472 chr2L 11841299 11841367 chr2L 11841446 11841524 15 153 4.0 0.0 2.0 5.0 225 chr2L 11841299 intron Pde1c - chr2L 11841412 intron Pde1c - chr2L 11841524 intron Pde1c - chr2L_15_11840001 chr2L_11840001 RAL-853_125b 473 chr2L 11905412 11905610 chr2L 11905546 11905750 36 137 0.0 0.5 0.2 30.0 338 chr2L 11905412 intron Pde1c - chr2L 11905581 intron Pde1c - chr2L 11905750 intron Pde1c - chr2L_36_11905001 chr2L_11905001 RAL-853_125b 474 chr2L 12026756 12026775 chr2L 12026980 12027006 6 230 1.0 0.0 0.5 4.0 250 chr2L 12026756 intergenic not near genes chr2L 12026881 intergenic not near genes chr2L 12027006 intergenic dmGlut + chr2L_6_12025001 chr2L_12025001 RAL-853_125b 475 chr2L 12067293 12067345 chr2L 12074395 12074447 297 24 7102 9.5 6.0 7.8 2.7 7154 chr2L 12067293 intergenic not near genes chr2L 12070870 intergenic not near genes chr2L 12074447 intergenic not near genes chr2L_24_12070001 chr2L_12070001 RAL-853_125b 476 chr2L 12153888 12153960 chr2L 12154015 12154087 26 125 8.0 6.5 7.2 3.2 199 chr2L 12153888 exon CG31760 + chr2L 12153988 intron CG31760 + chr2L 12154087 intron CG31760 + chr2L_26_12150001 chr2L_12150001 RAL-853_125b 477 chr2L 12175771 12175830 chr2L 12175902 12175962 5 132 8.0 0.0 4.0 1.0 191 chr2L 12175771 intron,intron aret +,atilla - chr2L 12175866 intron,intron aret +,atilla - chr2L 12175962 intron,intron aret +,atilla - chr2L_5_12175001 chr2L_12175001 RAL-853_125b 478 chr2L 12209996 12210047 chr2L 12210135 12210186 20 139 7.0 5.0 6.0 2.9 190 chr2L 12209996 intron,3` UTR aret +,CG31759 + chr2L 12210091 intron aret + chr2L 12210186 intron aret + chr2L_20_12210001 chr2L_12210001 RAL-853_125b 479 chr2L 12269362 12269401 chr2L 12269490 12269529 15 128 11.0 10.0 10.5 1.3 167 chr2L 12269362 intron aret + chr2L 12269446 intron aret + chr2L 12269529 intron aret + chr2L_15_12265001 chr2L_12265001 RAL-853_125b 480 chr2L 12272117 12272143 chr2L 12272245 12272271 12 128 8.5 6.5 7.5 1.4 154 chr2L 12272117 intron aret + chr2L 12272194 intron aret + chr2L 12272271 intron aret + chr2L_12_12270001 chr2L_12270001 RAL-853_125b 481 chr2L 12305365 12305434 chr2L 12305503 12305572 30 138 8.0 7.0 7.5 3.5 207 chr2L 12305365 intron aret + chr2L 12305468 intron aret + chr2L 12305572 intron aret + chr2L_30_12305001 chr2L_12305001 RAL-853_125b 482 chr2L 12366826 12366877 chr2L 12366962 12367013 14 136 8.0 7.5 7.8 1.6 187 chr2L 12366826 intron bru-2 + chr2L 12366920 intron bru-2 + chr2L 12367013 intron bru-2 + chr2L_14_12365001 chr2L_12365001 RAL-853_125b 483 chr2L 12410892 12410961 chr2L 12411029 12411102 20 141 6.0 6.0 6.0 2.9 210 chr2L 12410892 intron vir-1 - chr2L 12410997 intron vir-1 - chr2L 12411102 intron vir-1 - chr2L_20_12410001 chr2L_12410001 RAL-853_125b 484 chr2L 12423696 12423764 chr2L 12423830 12423892 26 131 3.0 5.5 4.2 5.0 196 chr2L 12423696 intergenic vir-1 - chr2L 12423794 intergenic vir-1 - chr2L 12423892 intergenic vir-1 - chr2L_26_12420001 chr2L_12420001 RAL-853_125b 485 chr2L 12480524 12480539 chr2L 12480651 12480666 4 127 13.0 8.0 10.5 0.3 142 chr2L 12480524 intron bun - chr2L 12480595 intron bun - chr2L 12480666 intron bun - chr2L_4_12480001 chr2L_12480001 RAL-853_125b 486 chr2L 12480540 12480569 chr2L 12480627 12480696 16 124 7.5 7.5 7.5 1.9 156 chr2L 12480540 intron bun - chr2L 12480618 intron bun - chr2L 12480696 intron bun - chr2L_16_12480001 chr2L_12480001 RAL-853_125b 487 chr2L 12481331 12481402 chr2L 12481463 12481534 25 131 8.0 8.5 8.2 2.7 203 chr2L 12481331 intron bun - chr2L 12481432 intron bun - chr2L 12481534 intron bun - chr2L_25_12480001 chr2L_12480001 RAL-853_125b 488 chr2L 12500571 12500617 chr2L 12500697 12500743 21 125 7.0 17.0 12.0 1.6 172 chr2L 12500571 intron bun - chr2L 12500657 intron bun - chr2L 12500743 intron bun - chr2L_21_12500001 chr2L_12500001 RAL-853_125b 489 chr2L 12529198 12529383 chr2L 12529381 12529509 28 171 0.0 0.0 0.0 28.0 311 chr2L 12529198 intron bun - chr2L 12529354 intron bun - chr2L 12529509 intron bun - chr2L_28_12525001 chr2L_12525001 RAL-853_125b 490 chr2L 12558279 12558347 chr2L 12565458 12565526 HMS-Beagle 32 7176 4.5 6.0 5.2 5.2 7247 chr2L 12558279 intergenic not near genes chr2L 12561902 intergenic not near genes chr2L 12565526 intergenic not near genes chr2L_32_12560001 chr2L_12560001 RAL-853_125b 491 chr2L 12570304 12570375 chr2L 12570435 12570514 13 138 8.5 0.0 4.2 2.5 210 chr2L 12570304 intergenic CR44598 - chr2L 12570409 intergenic CR44598 - chr2L 12570514 intergenic CR44598 - chr2L_13_12570001 chr2L_12570001 RAL-853_125b 492 chr2L 12599081 12599137 chr2L 12599378 12599436 10 298 0.0 7.5 3.8 2.1 355 chr2L 12599081 intron nub + chr2L 12599258 intron nub + chr2L 12599436 intron nub + chr2L_10_12595001 chr2L_12595001 RAL-853_125b 493 chr2L 12619860 12619906 chr2L 12619980 12620032 17 125 9.0 9.0 9.0 1.7 172 chr2L 12619860 intron,intron nub +,Ref2 - chr2L 12619946 intron,intron nub +,Ref2 - chr2L 12620032 intron,intron nub +,Ref2 - chr2L_17_12615001 chr2L_12615001 RAL-853_125b 494 chr2L 12728881 12728942 chr2L 12729173 12729234 pogo 19 291 10.5 10.5 10.5 1.7 353 chr2L 12728881 intron MRP + chr2L 12729058 intron MRP + chr2L 12729234 exon MRP + chr2L_19_12725001 chr2L_12725001 RAL-853_125b 495 chr2L 12731026 12731083 chr2L 12735833 12735900 F-element 22 4816 10.0 9.0 9.5 2.1 4874 chr2L 12731026 intron MRP + chr2L 12733463 intron MRP + chr2L 12735900 intron MRP + chr2L_22_12730001 chr2L_12730001 RAL-853_125b 496 chr2L 12739130 12739196 chr2L 12743961 12744027 Doc 27 4831 9.5 11.0 10.2 2.4 4897 chr2L 12739130 exon MRP + chr2L 12741578 intron MRP + chr2L 12744027 exon MRP + chr2L_27_12740001 chr2L_12740001 RAL-853_125b 497 chr2L 12751266 12751339 chr2L 12751399 12751472 30 132 4.0 3.0 3.5 6.7 206 chr2L 12751266 intergenic not near genes chr2L 12751369 intergenic not near genes chr2L 12751472 intergenic not near genes chr2L_30_12750001 chr2L_12750001 RAL-853_125b 498 chr2L 12760200 12760257 chr2L 12760341 12760405 16 146 4.5 8.5 6.5 2.1 205 chr2L 12760200 intergenic CG15483 - chr2L 12760302 intergenic CG15483 - chr2L 12760405 3` UTR CG15483 - chr2L_16_12760001 chr2L_12760001 RAL-853_125b 499 chr2L 12763783 12763867 chr2L 12764045 12764129 BS 20 262 0.0 0.0 0.0 20.0 346 chr2L 12763783 intergenic not near genes chr2L 12763956 intergenic not near genes chr2L 12764129 intergenic not near genes chr2L_20_12760001 chr2L_12760001 RAL-853_125b 500 chr2L 12766711 12766754 chr2L 12766839 12766882 16 128 9.0 5.0 7.0 2.0 171 chr2L 12766711 intergenic not near genes chr2L 12766796 intergenic not near genes chr2L 12766882 intergenic not near genes chr2L_16_12765001 chr2L_12765001 RAL-853_125b 501 chr2L 12781763 12781815 chr2L 12789256 12789308 Quasimodo 19 7543 14.0 5.5 9.8 1.8 7545 chr2L 12781763 intergenic not near genes chr2L 12785536 intergenic not near genes chr2L 12789308 intergenic not near genes chr2L_19_12785001 chr2L_12785001 RAL-853_125b 502 chr2L 12791580 12791625 chr2L 12795295 12795350 F-element 18 3722 1.0 7.5 4.2 3.5 3770 chr2L 12791580 intergenic not near genes chr2L 12793465 intergenic not near genes chr2L 12795350 intergenic not near genes chr2L_18_12790001 chr2L_12790001 RAL-853_125b 503 chr2L 12861665 12861718 chr2L 12863167 12863235 hobo 20 1515 7.0 7.0 7.0 2.5 1570 chr2L 12861665 intergenic not near genes chr2L 12862450 intergenic not near genes chr2L 12863235 intergenic not near genes chr2L_20_12860001 chr2L_12860001 RAL-853_125b 504 chr2L 12893991 12894007 chr2L 12895500 12895505 hobo 9 1511 13.0 15.0 14.0 0.6 1514 chr2L 12893991 intergenic not near genes chr2L 12894748 intergenic not near genes chr2L 12895505 intergenic not near genes chr2L_9_12890001 chr2L_12890001 RAL-853_125b 505 chr2L 12894011 12894047 chr2L 12895499 12895534 hobo 14 1506 8.0 15.0 11.5 1.1 1523 chr2L 12894011 intergenic not near genes chr2L 12894772 intergenic not near genes chr2L 12895534 intergenic not near genes chr2L_14_12890001 chr2L_12890001 RAL-853_125b 506 chr2L 12907951 12908013 chr2L 12908140 12908202 27 183 6.5 9.5 8.0 3.0 251 chr2L 12907951 intergenic not near genes chr2L 12908076 intergenic not near genes chr2L 12908202 intergenic not near genes chr2L_27_12905001 chr2L_12905001 RAL-853_125b 507 chr2L 12930462 12930498 chr2L 12930588 12930624 14 126 6.0 8.0 7.0 1.8 162 chr2L 12930462 intergenic not near genes chr2L 12930543 intergenic not near genes chr2L 12930624 intergenic not near genes chr2L_14_12930001 chr2L_12930001 RAL-853_125b 508 chr2L 12933806 12933877 chr2L 12941323 12941394 blood 37 7516 8.0 8.5 8.2 4.0 7588 chr2L 12933806 intergenic not near genes chr2L 12937600 intergenic not near genes chr2L 12941394 intergenic not near genes chr2L_37_12935001 chr2L_12935001 RAL-853_125b 509 chr2L 13036200 13036263 chr2L 13036492 13036555 X-element 17 290 7.5 8.5 8.0 1.9 355 chr2L 13036200 intron CG9932 - chr2L 13036378 intron CG9932 - chr2L 13036555 intron CG9932 - chr2L_17_13035001 chr2L_13035001 RAL-853_125b 510 chr2L 13076816 13076847 chr2L 13076955 13076986 5 139 6.0 9.0 7.5 0.6 170 chr2L 13076816 intergenic not near genes chr2L 13076901 intergenic not near genes chr2L 13076986 intergenic not near genes chr2L_5_13075001 chr2L_13075001 RAL-853_125b 511 chr2L 13109413 13109467 chr2L 13109591 13109645 13 178 16.0 13.0 14.5 0.8 232 chr2L 13109413 3` UTR CG5142 + chr2L 13109529 intergenic CG5142 + chr2L 13109645 intergenic CG5142 + chr2L_13_13105001 chr2L_13105001 RAL-853_125b 512 chr2L 13110956 13111008 chr2L 13111092 13111143 6 134 5.0 7.5 6.2 0.8 187 chr2L 13110956 intergenic not near genes chr2L 13111050 intergenic not near genes chr2L 13111143 intergenic not near genes chr2L_6_13110001 chr2L_13110001 RAL-853_125b 513 chr2L 13176963 13177034 chr2L 13181534 13181559 4 4544 34.0 37.5 35.8 0.1 4596 chr2L 13176963 intergenic CG43925 +,Sfmbt -,CG5439 + chr2L 13179261 5` UTR CG5287 + chr2L 13181559 intron,exon CG5287 +,CG31849 - chr2L_4_13175001 chr2L_13175001 RAL-853_125b 514 chr2L 13253846 13253912 chr2L 13253984 13254050 12 138 14.5 14.0 14.2 0.8 204 chr2L 13253846 intron CG31728 + chr2L 13253948 intron CG31728 + chr2L 13254050 intron CG31728 + chr2L_12_13250001 chr2L_13250001 RAL-853_125b 515 chr2L 13266336 13266400 chr2L 13266474 13266538 22 138 10.5 16.0 13.2 1.5 202 chr2L 13266336 intron CG44085 + chr2L 13266437 intron CG44085 + chr2L 13266538 intron CG44085 + chr2L_22_13265001 chr2L_13265001 RAL-853_125b 516 chr2L 13273842 13273862 chr2L 13273940 13273954 4 94 11.5 18.5 15.0 0.2 112 chr2L 13273842 exon CG44085 + chr2L 13273898 exon CG44085 + chr2L 13273954 exon CG44085 + chr2L_4_13270001 chr2L_13270001 RAL-853_125b 517 chr2L 13292678 13292745 chr2L 13292810 13292878 17 132 11.5 12.0 11.8 1.3 200 chr2L 13292678 intron CG31729 + chr2L 13292778 intron CG31729 + chr2L 13292878 intron CG31729 + chr2L_17_13290001 chr2L_13290001 RAL-853_125b 518 chr2L 13316883 13316905 chr2L 13317016 13317038 8 131 13.5 13.0 13.2 0.6 155 chr2L 13316883 intron CG43778 - chr2L 13316960 intron CG43778 - chr2L 13317038 intron CG43778 - chr2L_8_13315001 chr2L_13315001 RAL-853_125b 519 chr2L 13321868 13321900 chr2L 13322007 13322039 6 137 32.0 31.0 31.5 0.2 171 chr2L 13321868 intron CG43778 - chr2L 13321954 intron CG43778 - chr2L 13322039 intron CG43778 - chr2L_6_13320001 chr2L_13320001 RAL-853_125b 520 chr2L 13326363 13326425 chr2L 13326498 13326576 16 125 16.5 15.0 15.8 1.0 213 chr2L 13326363 intron CG43778 - chr2L 13326470 intron CG43778 - chr2L 13326576 intron CG43778 - chr2L_16_13325001 chr2L_13325001 RAL-853_125b 521 chr2L 13330016 13330038 chr2L 13330144 13330166 7 128 8.5 0.0 4.2 1.3 150 chr2L 13330016 intron CG43778 - chr2L 13330091 intron CG43778 - chr2L 13330166 intron CG43778 - chr2L_7_13330001 chr2L_13330001 RAL-853_125b 522 chr2L 13341733 13341788 chr2L 13342396 13342451 8 663 29.5 22.5 26.0 0.3 718 chr2L 13341733 intergenic not near genes chr2L 13342092 intergenic not near genes chr2L 13342451 intergenic not near genes chr2L_8_13340001 chr2L_13340001 RAL-853_125b 523 chr2L 13351772 13351837 chr2L 13351908 13351973 29 136 24.0 26.0 25.0 1.1 201 chr2L 13351772 exon CG9395 - chr2L 13351872 intron CG9395 - chr2L 13351973 exon CG9395 - chr2L_29_13350001 chr2L_13350001 RAL-853_125b 524 chr2L 13357830 13357907 chr2L 13357975 13358037 24 144 19.5 18.0 18.8 1.2 207 chr2L 13357830 intergenic not near genes chr2L 13357934 intergenic not near genes chr2L 13358037 intergenic not near genes chr2L_24_13355001 chr2L_13355001 RAL-853_125b 525 chr2L 13374282 13374353 chr2L 13374419 13374490 36 132 16.5 16.0 16.2 2.1 208 chr2L 13374282 5` UTR CG6565 + chr2L 13374386 5` UTR CG6565 + chr2L 13374490 5` UTR CG6565 + chr2L_36_13370001 chr2L_13370001 RAL-853_125b 526 chr2L 13405611 13405669 chr2L 13410458 13410516 Doc 37 4847 12.0 10.5 11.2 3.0 4905 chr2L 13405611 exon CG7110 + chr2L 13408064 intron CG7110 + chr2L 13410516 exon CG7110 + chr2L_37_13405001 chr2L_13405001 RAL-853_125b 527 chr2L 13420721 13420777 chr2L 13420858 13420912 19 137 16.0 14.0 15.0 1.2 191 chr2L 13420721 intron CG42784 + chr2L 13420816 intron CG42784 + chr2L 13420912 intron CG42784 + chr2L_19_13420001 chr2L_13420001 RAL-853_125b 528 chr2L 13449432 13449490 chr2L 13456918 13456976 Quasimodo 19 7485 7.5 18.0 12.8 1.4 7544 chr2L 13449432 intron,intron CG42784 +,Hsp60D - chr2L 13453204 intron CG42784 + chr2L 13456976 intron CG42784 + chr2L_19_13450001 chr2L_13450001 RAL-853_125b 529 chr2L 13481415 13481464 chr2L 13482072 13482121 jockey 23 656 10.5 16.5 13.5 1.6 706 chr2L 13481415 intron CG42784 + chr2L 13481768 intron CG42784 + chr2L 13482121 intron CG42784 + chr2L_23_13480001 chr2L_13480001 RAL-853_125b 530 chr2L 13507591 13507643 chr2L 13507744 13507802 12 156 18.0 10.0 14.0 0.8 211 chr2L 13507591 intron B4 - chr2L 13507696 intron B4 - chr2L 13507802 intron B4 - chr2L_12_13505001 chr2L_13505001 RAL-853_125b 531 chr2L 13522241 13522282 chr2L 13527597 13527638 Transpac 10 5355 4.0 14.5 9.2 1.0 5397 chr2L 13522241 intron B4 - chr2L 13524940 intron B4 - chr2L 13527638 intron B4 - chr2L_10_13520001 chr2L_13520001 RAL-853_125b 532 chr2L 13553872 13553888 chr2L 13554065 13554081 5 193 22.0 12.0 17.0 0.3 209 chr2L 13553872 intron kuz + chr2L 13553976 intron kuz + chr2L 13554081 intron kuz + chr2L_5_13550001 chr2L_13550001 RAL-853_125b 533 chr2L 13556581 13556606 chr2L 13556712 13556736 6 130 3.5 0.0 1.8 2.1 155 chr2L 13556581 intron kuz + chr2L 13556658 intron kuz + chr2L 13556736 intron kuz + chr2L_6_13555001 chr2L_13555001 RAL-853_125b 534 chr2L 13560364 13560421 chr2L 13565235 13565291 F-element 17 4870 3.5 7.5 5.5 2.6 4927 chr2L 13560364 intron kuz + chr2L 13562828 intron kuz + chr2L 13565291 intron kuz + chr2L_17_13560001 chr2L_13560001 RAL-853_125b 535 chr2L 13589580 13589647 chr2L 13589780 13589847 17 192 16.5 9.0 12.8 1.2 267 chr2L 13589580 intron kuz + chr2L 13589714 intron kuz + chr2L 13589847 intron kuz + chr2L_17_13585001 chr2L_13585001 RAL-853_125b 536 chr2L 13605039 13605081 chr2L 13605127 13605194 10 108 14.0 13.0 13.5 0.7 155 chr2L 13605039 intron kuz + chr2L 13605116 intron kuz + chr2L 13605194 intron kuz + chr2L_10_13605001 chr2L_13605001 RAL-853_125b 537 chr2L 13609538 13609554 chr2L 13609752 13609768 5 214 20.5 9.5 15.0 0.3 230 chr2L 13609538 intron kuz + chr2L 13609653 intron kuz + chr2L 13609768 intron kuz + chr2L_5_13605001 chr2L_13605001 RAL-853_125b 538 chr2L 13622090 13622168 chr2L 13622239 13622317 22 140 6.5 5.0 5.8 3.2 227 chr2L 13622090 intron kuz + chr2L 13622204 intron kuz + chr2L 13622317 intron kuz + chr2L_22_13620001 chr2L_13620001 RAL-853_125b 539 chr2L 13680414 13680434 chr2L 13680836 13680888 4 446 30.0 22.0 26.0 0.1 474 chr2L 13680414 intron CG31814 - chr2L 13680651 intron CG31814 - chr2L 13680888 intron CG31814 - chr2L_4_13680001 chr2L_13680001 RAL-853_125b 540 chr2L 13701842 13701904 chr2L 13701972 13702034 8 130 21.5 27.5 24.5 0.3 192 chr2L 13701842 intron CG31814 - chr2L 13701938 intron CG31814 - chr2L 13702034 intron CG31814 - chr2L_8_13700001 chr2L_13700001 RAL-853_125b 541 chr2L 13715234 13715300 chr2L 13715411 13715476 27 173 18.0 12.0 15.0 1.7 242 chr2L 13715234 intron CG31814 - chr2L 13715355 intron CG31814 - chr2L 13715476 intron CG31814 - chr2L_27_13715001 chr2L_13715001 RAL-853_125b 542 chr2L 13720191 13720202 chr2L 13720329 13720340 7 138 17.0 5.5 11.2 0.6 149 chr2L 13720191 intergenic not near genes chr2L 13720266 intergenic not near genes chr2L 13720340 intergenic not near genes chr2L_7_13720001 chr2L_13720001 RAL-853_125b 543 chr2L 13733723 13733788 chr2L 13733892 13733957 14 169 1.0 5.0 3.0 3.5 234 chr2L 13733723 intergenic not near genes chr2L 13733840 intergenic not near genes chr2L 13733957 intergenic not near genes chr2L_14_13730001 chr2L_13730001 RAL-853_125b 544 chr2L 13752761 13752786 chr2L 13752929 13752954 4 168 29.0 20.0 24.5 0.2 193 chr2L 13752761 intron,intron CR44846 +,TM9SF4 + chr2L 13752858 intron,intron CR44846 +,TM9SF4 + chr2L 13752954 intron,intron CR44846 +,TM9SF4 + chr2L_4_13750001 chr2L_13750001 RAL-853_125b 545 chr2L 13752796 13752816 chr2L 13752927 13752953 5 154 22.0 20.0 21.0 0.2 157 chr2L 13752796 intron,intron CR44846 +,TM9SF4 + chr2L 13752874 intron,intron CR44846 +,TM9SF4 + chr2L 13752953 intron,intron CR44846 +,TM9SF4 + chr2L_5_13750001 chr2L_13750001 RAL-853_125b 546 chr2L 13761786 13761826 chr2L 13762947 13762982 Doc 12 1158 6.5 10.5 8.5 1.3 1196 chr2L 13761786 intron TM9SF4 + chr2L 13762384 intron TM9SF4 + chr2L 13762982 intron TM9SF4 + chr2L_12_13760001 chr2L_13760001 RAL-853_125b 547 chr2L 13800135 13800197 chr2L 13800289 13800351 18 153 12.0 12.5 12.2 1.4 216 chr2L 13800135 intergenic Sec71 + chr2L 13800243 intergenic not near genes chr2L 13800351 intergenic not near genes chr2L_18_13800001 chr2L_13800001 RAL-853_125b 548 chr2L 13842087 13842158 chr2L 13842221 13842292 10 134 25.5 27.0 26.2 0.4 205 chr2L 13842087 intron CenG1A + chr2L 13842190 intron CenG1A + chr2L 13842292 intron CenG1A + chr2L_10_13840001 chr2L_13840001 RAL-853_125b 549 chr2L 13853045 13853103 chr2L 13862245 13862303 roo 25 9200 10.0 12.5 11.2 2.0 9258 chr2L 13853045 intron CenG1A + chr2L 13857674 intron CenG1A + chr2L 13862303 intron CenG1A + chr2L_25_13855001 chr2L_13855001 RAL-853_125b 550 chr2L 13913546 13913602 chr2L 13913709 13913765 9 163 8.0 9.5 8.8 0.9 219 chr2L 13913546 intergenic not near genes chr2L 13913656 intergenic not near genes chr2L 13913765 intergenic not near genes chr2L_9_13910001 chr2L_13910001 RAL-853_125b 551 chr2L 13944358 13944418 chr2L 13944528 13944588 4 170 15.0 13.5 14.2 0.3 230 chr2L 13944358 intron Ance-3 + chr2L 13944473 intron Ance-3 + chr2L 13944588 intron Ance-3 + chr2L_4_13940001 chr2L_13940001 RAL-853_125b 552 chr2L 13972609 13972677 chr2L 13972746 13972814 31 137 9.5 15.5 12.5 2.3 205 chr2L 13972609 exon He - chr2L 13972712 intron He - chr2L 13972814 exon He - chr2L_31_13970001 chr2L_13970001 RAL-853_125b 553 chr2L 13970353 13970421 chr2L 13975051 13975119 25 4699 40.0 68.5 54.2 0.5 4766 chr2L 13970353 intron NimB5 + chr2L 13972736 intron He - chr2L 13975119 exon NimC1 - chr2L_25_13970001 chr2L_13970001 RAL-853_125b 554 chr2L 13981478 13981546 chr2L 13981619 13981667 19 139 8.0 7.5 7.8 2.2 189 chr2L 13981478 exon NimC2 + chr2L 13981572 intron NimC2 + chr2L 13981667 intron NimC2 + chr2L_19_13980001 chr2L_13980001 RAL-853_125b 555 chr2L 13988242 13988291 chr2L 13988379 13988428 7 137 21.5 23.0 22.2 0.3 186 chr2L 13988242 intron rk - chr2L 13988335 intron rk - chr2L 13988428 intron rk - chr2L_7_13985001 chr2L_13985001 RAL-853_125b 556 chr2L 14005131 14005208 chr2L 14005259 14005336 6 120 4.0 6.0 5.0 1.0 205 chr2L 14005131 intergenic not near genes chr2L 14005234 intergenic not near genes chr2L 14005336 intergenic not near genes chr2L_6_14005001 chr2L_14005001 RAL-853_125b 557 chr2L 14010350 14010434 chr2L 14010480 14010560 17 128 15.5 15.0 15.2 1.0 210 chr2L 14010350 intergenic not near genes chr2L 14010455 intergenic not near genes chr2L 14010560 intergenic not near genes chr2L_17_14010001 chr2L_14010001 RAL-853_125b 558 chr2L 14068554 14068633 chr2L 14068683 14068749 15 124 10.0 7.0 8.5 1.6 195 chr2L 14068554 intron nAChRalpha5 + chr2L 14068652 intron nAChRalpha5 + chr2L 14068749 intron nAChRalpha5 + chr2L_15_14065001 chr2L_14065001 RAL-853_125b 559 chr2L 14071962 14072026 chr2L 14072180 14072255 13 225 22.5 19.0 20.8 0.6 293 chr2L 14071962 intron nAChRalpha5 + chr2L 14072108 intron nAChRalpha5 + chr2L 14072255 intron nAChRalpha5 + chr2L_13_14070001 chr2L_14070001 RAL-853_125b 560 chr2L 14078749 14078800 chr2L 14078886 14078937 9 137 11.0 11.5 11.2 0.7 188 chr2L 14078749 intron nAChRalpha5 + chr2L 14078843 intron nAChRalpha5 + chr2L 14078937 intron nAChRalpha5 + chr2L_9_14075001 chr2L_14075001 RAL-853_125b 561 chr2L 14079120 14079184 chr2L 14079707 14079771 10 586 21.5 28.5 25.0 0.4 651 chr2L 14079120 intron nAChRalpha5 + chr2L 14079446 intron nAChRalpha5 + chr2L 14079771 intron nAChRalpha5 + chr2L_10_14075001 chr2L_14075001 RAL-853_125b 562 chr2L 14152576 14152603 chr2L 14152715 14152744 7 141 11.0 14.5 12.8 0.5 168 chr2L 14152576 intron CG17341 + chr2L 14152660 intron CG17341 + chr2L 14152744 intron CG17341 + chr2L_7_14150001 chr2L_14150001 RAL-853_125b 563 chr2L 14160645 14160719 chr2L 14160779 14160859 21 136 11.5 11.5 11.5 1.7 214 chr2L 14160645 intergenic CG17341 +,CG43332 - chr2L 14160752 intergenic CG17341 +,CG43332 - chr2L 14160859 intergenic CG17341 +,CG43332 - chr2L_21_14160001 chr2L_14160001 RAL-853_125b 564 chr2L 14180014 14180092 chr2L 14180140 14180218 26 126 15.0 16.0 15.5 1.6 204 chr2L 14180014 intron CG43333 - chr2L 14180116 intron CG43333 - chr2L 14180218 exon CG43333 - chr2L_26_14180001 chr2L_14180001 RAL-853_125b 565 chr2L 14222265 14222329 chr2L 14222402 14222466 12 136 18.5 27.0 22.8 0.5 201 chr2L 14222265 intron Dyrk2 - chr2L 14222366 intron Dyrk2 - chr2L 14222466 intron Dyrk2 - chr2L_12_14220001 chr2L_14220001 RAL-853_125b 566 chr2L 14236200 14236267 chr2L 14236341 14236414 6 146 10.0 2.0 6.0 0.9 214 chr2L 14236200 5` UTR CR44728 + chr2L 14236307 5` UTR CR44728 + chr2L 14236414 intergenic CR44728 + chr2L_6_14235001 chr2L_14235001 RAL-853_125b 567 chr2L 14271907 14271968 chr2L 14272180 14272246 8 276 19.0 17.5 18.2 0.4 339 chr2L 14271907 intron wb + chr2L 14272076 intron wb + chr2L 14272246 intron wb + chr2L_8_14270001 chr2L_14270001 RAL-853_125b 568 chr2L 14313139 14313207 chr2L 14313333 14313401 22 193 15.5 15.5 15.5 1.3 262 chr2L 14313139 intron wb + chr2L 14313270 intron wb + chr2L 14313401 intron wb + chr2L_22_14310001 chr2L_14310001 RAL-853_125b 569 chr2L 14369091 14369151 chr2L 14369257 14369317 16 165 15.5 14.0 14.8 1.0 226 chr2L 14369091 intergenic not near genes chr2L 14369204 intergenic not near genes chr2L 14369317 intergenic not near genes chr2L_16_14365001 chr2L_14365001 RAL-853_125b 570 chr2L 14374735 14374801 chr2L 14374876 14374942 6 141 32.5 40.5 36.5 0.2 207 chr2L 14374735 intergenic not near genes chr2L 14374838 intergenic not near genes chr2L 14374942 intergenic not near genes chr2L_6_14370001 chr2L_14370001 RAL-853_125b 571 chr2L 14378003 14378065 chr2L 14378379 14378441 15 376 17.5 17.5 17.5 0.8 438 chr2L 14378003 intergenic ppk - chr2L 14378222 3` UTR ppk - chr2L 14378441 3` UTR ppk - chr2L_15_14375001 chr2L_14375001 RAL-853_125b 572 chr2L 14378614 14378677 chr2L 14378743 14378804 8 129 27.5 24.5 26.0 0.3 190 chr2L 14378614 3` UTR ppk - chr2L 14378709 3` UTR ppk - chr2L 14378804 3` UTR ppk - chr2L_8_14375001 chr2L_14375001 RAL-853_125b 573 chr2L 14396161 14396212 chr2L 14398967 14399018 10 2806 41.0 35.0 38.0 0.3 2857 chr2L 14396161 intron elB - chr2L 14397590 intron elB - chr2L 14399018 intron elB - chr2L_10_14395001 chr2L_14395001 RAL-853_125b 574 chr2L 14396037 14396105 chr2L 14399096 14399164 13 3060 45.0 40.0 42.5 0.3 3127 chr2L 14396037 intron elB - chr2L 14397600 intron elB - chr2L 14399164 intron elB - chr2L_13_14395001 chr2L_14395001 RAL-853_125b 575 chr2L 14424162 14424183 chr2L 14424301 14424322 5 139 10.0 12.5 11.2 0.4 160 chr2L 14424162 intergenic Cpr35B - chr2L 14424242 intergenic Cpr35B - chr2L 14424322 3` UTR Cpr35B - chr2L_5_14420001 chr2L_14420001 RAL-853_125b 576 chr2L 14429390 14429433 chr2L 14429521 14429564 4 131 26.5 19.0 22.8 0.2 174 chr2L 14429390 3` UTR CR44732 - chr2L 14429477 3` UTR CR44732 - chr2L 14429564 3` UTR CR44732 - chr2L_4_14425001 chr2L_14425001 RAL-853_125b 577 chr2L 14462677 14462820 chr2L 14462814 14462966 7 140 0.0 0.0 0.0 7.0 289 chr2L 14462677 intergenic not near genes chr2L 14462822 intergenic not near genes chr2L 14462966 intergenic not near genes chr2L_7_14460001 chr2L_14460001 RAL-853_125b 578 chr2L 14503386 14503434 chr2L 14503515 14503563 20 129 5.0 5.0 5.0 3.3 177 chr2L 14503386 intergenic not near genes chr2L 14503474 intergenic not near genes chr2L 14503563 intergenic not near genes chr2L_20_14500001 chr2L_14500001 RAL-853_125b 579 chr2L 14524571 14524645 chr2L 14525119 14525149 8 538 19.0 18.0 18.5 0.4 578 chr2L 14524571 exon CG33648 + chr2L 14524860 intron CG33648 + chr2L 14525149 exon CG33648 + chr2L_8_14520001 chr2L_14520001 RAL-853_125b 580 chr2L 14554118 14554197 chr2L 14554245 14554316 13 124 21.0 21.0 21.0 0.6 198 chr2L 14554118 intergenic not near genes chr2L 14554217 intergenic not near genes chr2L 14554316 intergenic not near genes chr2L_13_14550001 chr2L_14550001 RAL-853_125b 581 chr2L 14555102 14555144 chr2L 14555231 14555273 5 129 26.0 24.0 25.0 0.2 171 chr2L 14555102 intergenic not near genes chr2L 14555188 intergenic not near genes chr2L 14555273 intergenic not near genes chr2L_5_14555001 chr2L_14555001 RAL-853_125b 582 chr2L 14588344 14588409 chr2L 14588548 14588613 20 201 0.5 11.5 6.0 2.9 269 chr2L 14588344 intergenic CG42680 - chr2L 14588478 intergenic CG42680 - chr2L 14588613 intergenic CG42680 - chr2L_20_14585001 chr2L_14585001 RAL-853_125b 583 chr2L 14588640 14588671 chr2L 14588980 14589012 8 341 5.5 6.5 6.0 1.1 372 chr2L 14588640 intergenic CG42680 - chr2L 14588826 intergenic not near genes chr2L 14589012 intergenic not near genes chr2L_8_14585001 chr2L_14585001 RAL-853_125b 584 chr2L 14613239 14613288 chr2L 14613506 14613578 19 282 14.0 15.0 14.5 1.2 339 chr2L 14613239 intron osp - chr2L 14613408 intron,5` UTR osp -,CR43411 + chr2L 14613578 intron,5` UTR osp -,CR43411 + chr2L_19_14610001 chr2L_14610001 RAL-853_125b 585 chr2L 14618868 14618889 chr2L 14619299 14619320 jockey 8 431 10.5 9.0 9.8 0.7 452 chr2L 14618868 intron,3` UTR,3` UTR osp -,Adh +,Adhr + chr2L 14619094 intron osp - chr2L 14619320 intron osp - chr2L_8_14615001 chr2L_14615001 RAL-853_125b 586 chr2L 14642539 14642559 chr2L 14651745 14651772 roo 7 9211 17.0 7.5 12.2 0.5 9233 chr2L 14642539 intron osp - chr2L 14647156 intron osp - chr2L 14651772 intron osp - chr2L_7_14645001 chr2L_14645001 RAL-853_125b 587 chr2L 14642562 14642594 chr2L 14651743 14651807 roo 12 9210 9.5 7.0 8.2 1.3 9245 chr2L 14642562 intron osp - chr2L 14647184 intron osp - chr2L 14651807 intron osp - chr2L_12_14645001 chr2L_14645001 RAL-853_125b 588 chr2L 14694210 14694280 chr2L 14694384 14694454 25 173 5.0 2.5 3.8 5.2 244 chr2L 14694210 intergenic not near genes chr2L 14694332 intergenic not near genes chr2L 14694454 intergenic not near genes chr2L_25_14690001 chr2L_14690001 RAL-853_125b 589 chr2L 14707172 14707237 chr2L 14707341 14707385 16 167 19.5 13.0 16.2 0.9 213 chr2L 14707172 intergenic not near genes chr2L 14707278 intergenic not near genes chr2L 14707385 intergenic not near genes chr2L_16_14705001 chr2L_14705001 RAL-853_125b 590 chr2L 14721563 14721630 chr2L 14721691 14721696 4 110 27.0 27.0 27.0 0.1 133 chr2L 14721563 intergenic not near genes chr2L 14721630 intergenic not near genes chr2L 14721696 intergenic not near genes chr2L_4_14720001 chr2L_14720001 RAL-853_125b 591 chr2L 14726547 14726566 chr2L 14726679 14726698 5 132 9.5 13.5 11.5 0.4 151 chr2L 14726547 intron CG42685 - chr2L 14726622 intron CG42685 - chr2L 14726698 intron CG42685 - chr2L_5_14725001 chr2L_14725001 RAL-853_125b 592 chr2L 14761860 14761894 chr2L 14762009 14762043 6 149 24.5 24.0 24.2 0.2 183 chr2L 14761860 3` UTR CG4691 + chr2L 14761952 intergenic CR44858 +,CG4691 + chr2L 14762043 5` UTR CR44858 + chr2L_6_14760001 chr2L_14760001 RAL-853_125b 593 chr2L 14768881 14768957 chr2L 14769009 14769084 15 125 0.0 3.5 1.8 5.4 203 chr2L 14768881 intergenic not near genes chr2L 14768982 intergenic not near genes chr2L 14769084 intergenic not near genes chr2L_15_14765001 chr2L_14765001 RAL-853_125b 594 chr2L 14778768 14778830 chr2L 14779101 14779167 19 332 8.5 6.5 7.5 2.2 399 chr2L 14778768 intergenic not near genes chr2L 14778968 intergenic not near genes chr2L 14779167 intergenic not near genes chr2L_19_14775001 chr2L_14775001 RAL-853_125b 595 chr2L 14803839 14803853 chr2L 14809092 14809106 copia 10 5253 19.5 9.5 14.5 0.6 5267 chr2L 14803839 intergenic not near genes chr2L 14806472 intergenic not near genes chr2L 14809106 intergenic not near genes chr2L_10_14805001 chr2L_14805001 RAL-853_125b 596 chr2L 14803854 14803905 chr2L 14809085 14809158 copia 24 5250 8.5 8.5 8.5 2.5 5304 chr2L 14803854 intergenic not near genes chr2L 14806506 intergenic not near genes chr2L 14809158 intergenic not near genes chr2L_24_14805001 chr2L_14805001 RAL-853_125b 597 chr2L 14839704 14839776 chr2L 14839830 14839902 5 126 19.5 20.0 19.8 0.2 198 chr2L 14839704 intergenic not near genes chr2L 14839803 intergenic not near genes chr2L 14839902 intergenic not near genes chr2L_5_14835001 chr2L_14835001 RAL-853_125b 598 chr2L 14840927 14840992 chr2L 14841065 14841129 17 137 9.5 11.0 10.2 1.5 202 chr2L 14840927 3` UTR CR43805 - chr2L 14841028 3` UTR CR43805 - chr2L 14841129 3` UTR CR43805 - chr2L_17_14840001 chr2L_14840001 RAL-853_125b 599 chr2L 14887641 14887688 chr2L 14887769 14887816 13 128 6.5 10.0 8.2 1.4 175 chr2L 14887641 intergenic not near genes chr2L 14887728 intergenic not near genes chr2L 14887816 intergenic not near genes chr2L_13_14885001 chr2L_14885001 RAL-853_125b 600 chr2L 14889905 14889974 chr2L 14890380 14890449 jockey 29 475 4.0 4.5 4.2 5.6 544 chr2L 14889905 intergenic not near genes chr2L 14890177 intergenic not near genes chr2L 14890449 intergenic not near genes chr2L_29_14890001 chr2L_14890001 RAL-853_125b 601 chr2L 14901503 14901540 chr2L 14901652 14901689 4 149 32.0 35.5 33.8 0.1 186 chr2L 14901503 intergenic not near genes chr2L 14901596 intergenic not near genes chr2L 14901689 intergenic not near genes chr2L_4_14900001 chr2L_14900001 RAL-853_125b 602 chr2L 14920002 14920051 chr2L 14920126 14920180 5 128 26.0 26.0 26.0 0.2 178 chr2L 14920002 intron CG42313 - chr2L 14920091 intron CG42313 - chr2L 14920180 intron CG42313 - chr2L_5_14920001 chr2L_14920001 RAL-853_125b 603 chr2L 14923063 14923121 chr2L 14923193 14923251 12 130 18.0 12.5 15.2 0.7 188 chr2L 14923063 exon CG42313 - chr2L 14923157 intron CG42313 - chr2L 14923251 intron CG42313 - chr2L_12_14920001 chr2L_14920001 RAL-853_125b 604 chr2L 14947350 14947397 chr2L 14949094 14949141 5 1744 18.0 24.5 21.2 0.2 1791 chr2L 14947350 intron CG42313 - chr2L 14948246 intron CG42313 - chr2L 14949141 intron CG42313 - chr2L_5_14945001 chr2L_14945001 RAL-853_125b 605 chr2L 14984335 14984380 chr2L 14991987 14992032 opus 16 7652 12.5 8.0 10.2 1.4 7697 chr2L 14984335 intron mol - chr2L 14988184 intron mol - chr2L 14992032 intron mol - chr2L_16_14985001 chr2L_14985001 RAL-853_125b 606 chr2L 14984381 14984399 chr2L 14991980 14992051 opus 5 7639 10.0 6.5 8.2 0.5 7670 chr2L 14984381 intron mol - chr2L 14988216 intron mol - chr2L 14992051 intron mol - chr2L_5_14985001 chr2L_14985001 RAL-853_125b 607 chr2L 15003499 15003566 chr2L 15003633 15003700 16 133 10.0 13.5 11.8 1.2 201 chr2L 15003499 intergenic not near genes chr2L 15003600 intergenic not near genes chr2L 15003700 intergenic not near genes chr2L_16_15000001 chr2L_15000001 RAL-853_125b 608 chr2L 15004176 15004195 chr2L 15004314 15004333 5 138 28.5 28.0 28.2 0.2 157 chr2L 15004176 intergenic not near genes chr2L 15004254 intergenic not near genes chr2L 15004333 intergenic not near genes chr2L_5_15000001 chr2L_15000001 RAL-853_125b 609 chr2L 15013107 15013173 chr2L 15013261 15013332 14 154 11.5 12.5 12.0 1.1 225 chr2L 15013107 intergenic CR43856 - chr2L 15013220 intergenic not near genes chr2L 15013332 intergenic not near genes chr2L_14_15010001 chr2L_15010001 RAL-853_125b 610 chr2L 15014582 15014589 chr2L 15014707 15014718 4 128 1.5 8.0 4.8 0.7 136 chr2L 15014582 intergenic not near genes chr2L 15014650 intergenic not near genes chr2L 15014718 intergenic not near genes chr2L_4_15010001 chr2L_15010001 RAL-853_125b 611 chr2L 15014595 15014625 chr2L 15014703 15014754 6 125 2.5 7.5 5.0 1.0 159 chr2L 15014595 intergenic not near genes chr2L 15014674 intergenic not near genes chr2L 15014754 intergenic not near genes chr2L_6_15010001 chr2L_15010001 RAL-853_125b 612 chr2L 15025994 15025997 chr2L 15026121 15026128 4 130 21.0 17.0 19.0 0.2 134 chr2L 15025994 exon GABA-B-R1 + chr2L 15026061 exon GABA-B-R1 + chr2L 15026128 intron GABA-B-R1 + chr2L_4_15025001 chr2L_15025001 RAL-853_125b 613 chr2L 15026004 15026050 chr2L 15026118 15026181 21 130 14.5 17.5 16.0 1.2 177 chr2L 15026004 exon GABA-B-R1 + chr2L 15026092 intron GABA-B-R1 + chr2L 15026181 exon GABA-B-R1 + chr2L_21_15025001 chr2L_15025001 RAL-853_125b 614 chr2L 15044657 15044734 chr2L 15044783 15044866 15 128 11.0 8.5 9.8 1.4 209 chr2L 15044657 intergenic ck - chr2L 15044762 intergenic ck - chr2L 15044866 intergenic ck - chr2L_15_15040001 chr2L_15040001 RAL-853_125b 615 chr2L 15078020 15078072 chr2L 15078158 15078199 19 137 21.5 14.5 18.0 1.0 179 chr2L 15078020 intron CG15270 + chr2L 15078110 intron CG15270 + chr2L 15078199 intron CG15270 + chr2L_19_15075001 chr2L_15075001 RAL-853_125b 616 chr2L 15098505 15098540 chr2L 15098622 15098660 27 125 9.5 7.5 8.5 2.8 155 chr2L 15098505 intergenic not near genes chr2L 15098582 intergenic not near genes chr2L 15098660 intergenic not near genes chr2L_27_15095001 chr2L_15095001 RAL-853_125b 617 chr2L 15111335 15111403 chr2L 15111461 15111529 13 119 14.0 18.5 16.2 0.8 194 chr2L 15111335 intron CG15269 + chr2L 15111432 intron CG15269 + chr2L 15111529 intron CG15269 + chr2L_13_15110001 chr2L_15110001 RAL-853_125b 618 chr2L 15122726 15122803 chr2L 15122856 15122933 24 130 3.0 5.5 4.2 4.6 207 chr2L 15122726 intergenic not near genes chr2L 15122830 intergenic not near genes chr2L 15122933 intergenic not near genes chr2L_24_15120001 chr2L_15120001 RAL-853_125b 619 chr2L 15135255 15135271 chr2L 15135351 15135384 6 106 9.5 7.0 8.2 0.7 129 chr2L 15135255 intergenic not near genes chr2L 15135320 intergenic not near genes chr2L 15135384 intergenic not near genes chr2L_6_15135001 chr2L_15135001 RAL-853_125b 620 chr2L 15138938 15138985 chr2L 15139076 15139123 6 138 16.5 7.0 11.8 0.5 185 chr2L 15138938 intergenic not near genes chr2L 15139030 intergenic not near genes chr2L 15139123 intergenic not near genes chr2L_6_15135001 chr2L_15135001 RAL-853_125b 621 chr2L 15148545 15148561 chr2L 15148693 15148709 6 148 18.5 17.5 18.0 0.3 164 chr2L 15148545 intergenic not near genes chr2L 15148627 intergenic not near genes chr2L 15148709 intergenic not near genes chr2L_6_15145001 chr2L_15145001 RAL-853_125b 622 chr2L 15148575 15148603 chr2L 15148692 15148751 10 144 17.0 17.5 17.2 0.5 176 chr2L 15148575 intergenic not near genes chr2L 15148663 intergenic not near genes chr2L 15148751 intergenic not near genes chr2L_10_15145001 chr2L_15145001 RAL-853_125b 623 chr2L 15175211 15175284 chr2L 15175371 15175444 22 160 11.5 10.0 10.8 1.9 233 chr2L 15175211 intron CG4168 - chr2L 15175328 intron CG4168 - chr2L 15175444 intron CG4168 - chr2L_22_15175001 chr2L_15175001 RAL-853_125b 624 chr2L 15217208 15217276 chr2L 15217346 15217399 6 140 6.5 9.5 8.0 0.7 191 chr2L 15217208 intergenic not near genes chr2L 15217304 intergenic not near genes chr2L 15217399 intergenic not near genes chr2L_6_15215001 chr2L_15215001 RAL-853_125b 625 chr2L 15226326 15226383 chr2L 15226452 15226509 4 126 23.0 18.5 20.8 0.2 183 chr2L 15226326 intergenic not near genes chr2L 15226418 intergenic not near genes chr2L 15226509 intergenic not near genes chr2L_4_15225001 chr2L_15225001 RAL-853_125b 626 chr2L 15345981 15346027 chr2L 15346111 15346138 7 127 18.0 15.5 16.8 0.4 157 chr2L 15345981 intergenic not near genes chr2L 15346060 intergenic not near genes chr2L 15346138 intergenic not near genes chr2L_7_15345001 chr2L_15345001 RAL-853_125b 627 chr2L 15375783 15375844 chr2L 15375945 15376006 11 162 3.5 4.0 3.8 2.3 223 chr2L 15375783 intergenic not near genes chr2L 15375894 intergenic not near genes chr2L 15376006 intergenic not near genes chr2L_11_15375001 chr2L_15375001 RAL-853_125b 628 chr2L 15403208 15403266 chr2L 15403336 15403395 6 129 12.0 9.0 10.5 0.5 187 chr2L 15403208 intergenic not near genes chr2L 15403302 intergenic not near genes chr2L 15403395 intergenic not near genes chr2L_6_15400001 chr2L_15400001 RAL-853_125b 629 chr2L 15439309 15439341 chr2L 15439436 15439468 7 126 5.0 9.5 7.2 0.9 159 chr2L 15439309 intergenic not near genes chr2L 15439388 intergenic not near genes chr2L 15439468 intergenic not near genes chr2L_7_15435001 chr2L_15435001 RAL-853_125b 630 chr2L 15446016 15446071 chr2L 15453535 15453590 blood 16 7516 8.5 2.0 5.2 2.6 7574 chr2L 15446016 intergenic not near genes chr2L 15449803 intergenic not near genes chr2L 15453590 intergenic not near genes chr2L_16_15445001 chr2L_15445001 RAL-853_125b 631 chr2L 15458227 15458279 chr2L 15458365 15458417 16 138 2.0 9.0 5.5 2.5 190 chr2L 15458227 intergenic not near genes chr2L 15458322 intergenic not near genes chr2L 15458417 intergenic not near genes chr2L_16_15455001 chr2L_15455001 RAL-853_125b 632 chr2L 15476351 15476420 chr2L 15476560 15476629 14 206 11.5 2.0 6.8 1.8 278 chr2L 15476351 intergenic sna - chr2L 15476490 intergenic sna - chr2L 15476629 3` UTR sna - chr2L_14_15475001 chr2L_15475001 RAL-853_125b 633 chr2L 15483232 15483296 chr2L 15483368 15483432 7 136 22.0 12.5 17.2 0.4 200 chr2L 15483232 intergenic not near genes chr2L 15483332 intergenic not near genes chr2L 15483432 intergenic not near genes chr2L_7_15480001 chr2L_15480001 RAL-853_125b 634 chr2L 15489982 15490046 chr2L 15490137 15490212 10 165 0.0 4.5 2.2 3.1 230 chr2L 15489982 intergenic not near genes chr2L 15490097 intergenic not near genes chr2L 15490212 intergenic not near genes chr2L_10_15490001 chr2L_15490001 RAL-853_125b 635 chr2L 15499866 15499909 chr2L 15500004 15500047 14 138 8.0 6.5 7.2 1.7 181 chr2L 15499866 intron lace + chr2L 15499956 intron lace + chr2L 15500047 intron lace + chr2L_14_15495001 chr2L_15495001 RAL-853_125b 636 chr2L 15514279 15514326 chr2L 15514413 15514460 15 134 19.5 20.5 20.0 0.7 181 chr2L 15514279 intergenic not near genes chr2L 15514370 intergenic not near genes chr2L 15514460 intergenic not near genes chr2L_15_15510001 chr2L_15510001 RAL-853_125b 637 chr2L 15541081 15541124 chr2L 15541213 15541274 7 147 11.5 12.0 11.8 0.5 193 chr2L 15541081 intergenic not near genes chr2L 15541178 intergenic not near genes chr2L 15541274 intergenic not near genes chr2L_7_15540001 chr2L_15540001 RAL-853_125b 638 chr2L 15545448 15545501 chr2L 15545581 15545634 7 133 26.0 24.5 25.2 0.3 186 chr2L 15545448 intergenic not near genes chr2L 15545541 intergenic not near genes chr2L 15545634 intergenic not near genes chr2L_7_15545001 chr2L_15545001 RAL-853_125b 639 chr2L 15556541 15556606 chr2L 15556741 15556803 11 198 5.5 6.5 6.0 1.6 262 chr2L 15556541 intron kek3 + chr2L 15556672 intron kek3 + chr2L 15556803 intron kek3 + chr2L_11_15555001 chr2L_15555001 RAL-853_125b 640 chr2L 15586367 15586429 chr2L 15593469 15593531 297 22 7102 8.5 6.5 7.5 2.6 7164 chr2L 15586367 intergenic not near genes chr2L 15589949 intergenic not near genes chr2L 15593531 intergenic not near genes chr2L_22_15585001 chr2L_15585001 RAL-853_125b 641 chr2L 15598744 15598799 chr2L 15598873 15598928 12 126 5.5 0.0 2.8 3.2 184 chr2L 15598744 intergenic not near genes chr2L 15598836 intergenic not near genes chr2L 15598928 intergenic not near genes chr2L_12_15595001 chr2L_15595001 RAL-853_125b 642 chr2L 15636626 15636694 chr2L 15636752 15636822 13 128 11.0 12.5 11.8 1.0 196 chr2L 15636626 intergenic not near genes chr2L 15636724 intergenic not near genes chr2L 15636822 intergenic not near genes chr2L_13_15635001 chr2L_15635001 RAL-853_125b 643 chr2L 15736936 15737003 chr2L 15737071 15737138 12 135 11.5 7.0 9.2 1.2 202 chr2L 15736936 intron CycE - chr2L 15737037 intron CycE - chr2L 15737138 intron CycE - chr2L_12_15735001 chr2L_15735001 RAL-853_125b 644 chr2L 15819304 15819345 chr2L 15819422 15819470 12 125 6.0 12.5 9.2 1.2 166 chr2L 15819304 intergenic not near genes chr2L 15819387 intergenic not near genes chr2L 15819470 intergenic not near genes chr2L_12_15815001 chr2L_15815001 RAL-853_125b 645 chr2L 15823322 15823366 chr2L 15823448 15823492 5 126 20.0 20.0 20.0 0.2 170 chr2L 15823322 intergenic CR44601 - chr2L 15823407 intergenic CR44601 - chr2L 15823492 intergenic not near genes chr2L_5_15820001 chr2L_15820001 RAL-853_125b 646 chr2L 15826844 15826889 chr2L 15829288 15829333 Tabor 16 2443 3.5 8.0 5.8 2.4 2489 chr2L 15826844 intergenic not near genes chr2L 15828088 intergenic not near genes chr2L 15829333 intergenic not near genes chr2L_16_15825001 chr2L_15825001 RAL-853_125b 647 chr2L 15843285 15843311 chr2L 15845818 15845864 9 2547 31.5 16.5 24.0 0.4 2579 chr2L 15843285 intergenic not near genes chr2L 15844574 intergenic not near genes chr2L 15845864 intergenic not near genes chr2L_9_15840001 chr2L_15840001 RAL-853_125b 648 chr2L 15843195 15843262 chr2L 15845857 15845924 10 2662 27.0 19.5 23.2 0.4 2729 chr2L 15843195 intergenic not near genes chr2L 15844560 intergenic not near genes chr2L 15845924 intergenic not near genes chr2L_10_15840001 chr2L_15840001 RAL-853_125b 649 chr2L 15870233 15870293 chr2L 15870452 15870512 6 219 4.5 17.0 10.8 0.5 279 chr2L 15870233 intergenic not near genes chr2L 15870372 intergenic not near genes chr2L 15870512 intergenic not near genes chr2L_6_15870001 chr2L_15870001 RAL-853_125b 650 chr2L 15935161 15935184 chr2L 15935300 15935323 4 139 24.5 24.0 24.2 0.2 162 chr2L 15935161 intron beat-Ib - chr2L 15935242 intron beat-Ib - chr2L 15935323 intron beat-Ib - chr2L_4_15935001 chr2L_15935001 RAL-853_125b 651 chr2L 15955990 15956051 chr2L 15957507 15957568 hobo 27 1515 12.5 9.5 11.0 2.2 1578 chr2L 15955990 intron beat-Ib - chr2L 15956779 intron beat-Ib - chr2L 15957568 intron beat-Ib - chr2L_27_15955001 chr2L_15955001 RAL-853_125b 652 chr2L 15992491 15992568 chr2L 15992622 15992699 19 128 10.0 12.0 11.0 1.6 208 chr2L 15992491 intergenic not near genes chr2L 15992595 intergenic not near genes chr2L 15992699 intergenic not near genes chr2L_19_15990001 chr2L_15990001 RAL-853_125b 653 chr2L 16008669 16008721 chr2L 16008797 16008849 12 127 13.5 17.5 15.5 0.7 180 chr2L 16008669 intron beat-Ic + chr2L 16008759 intron beat-Ic + chr2L 16008849 intron beat-Ic + chr2L_12_16005001 chr2L_16005001 RAL-853_125b 654 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 28 145889 45.0 39.0 42.0 0.7 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_28_16140001 chr2L_16140001 RAL-853_125b 655 chr2L 16139162 16139225 chr2L 16139328 16139391 12 165 11.0 12.5 11.8 0.9 229 chr2L 16139162 intergenic not near genes chr2L 16139276 intergenic not near genes chr2L 16139391 intergenic not near genes chr2L_12_16135001 chr2L_16135001 RAL-853_125b 656 chr2L 16141104 16141189 chr2L 16146370 16146446 copia 8 5260 2.0 8.5 5.2 1.3 5342 chr2L 16141104 intergenic not near genes chr2L 16143775 intergenic not near genes chr2L 16146446 intergenic not near genes chr2L_8_16140001 chr2L_16140001 RAL-853_125b 657 chr2L 16146651 16146662 chr2L 16146778 16146794 5 128 34.5 32.0 33.2 0.1 143 chr2L 16146651 intergenic not near genes chr2L 16146722 intergenic not near genes chr2L 16146794 intergenic not near genes chr2L_5_16145001 chr2L_16145001 RAL-853_125b 658 chr2L 16146664 16146723 chr2L 16146775 16146833 6 118 31.5 32.0 31.8 0.2 169 chr2L 16146664 intergenic not near genes chr2L 16146748 intergenic not near genes chr2L 16146833 intergenic not near genes chr2L_6_16145001 chr2L_16145001 RAL-853_125b 659 chr2L 16153690 16153747 chr2L 16160794 16160865 297 21 7113 11.0 7.5 9.2 2.1 7175 chr2L 16153690 intergenic not near genes chr2L 16157278 intergenic not near genes chr2L 16160865 intergenic not near genes chr2L_21_16155001 chr2L_16155001 RAL-853_125b 660 chr2L 16161549 16161600 chr2L 16161751 16161802 11 201 14.0 16.0 15.0 0.7 253 chr2L 16161549 intergenic not near genes chr2L 16161676 intergenic not near genes chr2L 16161802 intergenic not near genes chr2L_11_16160001 chr2L_16160001 RAL-853_125b 661 chr2L 16197091 16197129 chr2L 16197817 16197855 4 726 29.5 23.5 26.5 0.1 764 chr2L 16197091 intergenic not near genes chr2L 16197473 intergenic not near genes chr2L 16197855 intergenic not near genes chr2L_4_16195001 chr2L_16195001 RAL-853_125b 662 chr2L 16197130 16197148 chr2L 16197814 16197874 5 718 24.0 23.0 23.5 0.2 744 chr2L 16197130 intergenic not near genes chr2L 16197502 intergenic not near genes chr2L 16197874 intergenic not near genes chr2L_5_16195001 chr2L_16195001 RAL-853_125b 663 chr2L 9084336 9084340 chr2L 16217660 16217660 19 7133321 29.0 39.0 34.0 0.5 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_19_12650001 chr2L_12650001 RAL-853_125b 664 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 32 145889 45.0 39.0 42.0 0.7 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_32_16140001 chr2L_16140001 RAL-853_125b 665 chr2L 16226139 16226198 chr2L 16226276 16226335 16 137 25.0 27.0 26.0 0.6 196 chr2L 16226139 intergenic not near genes chr2L 16226237 intergenic not near genes chr2L 16226335 intergenic not near genes chr2L_16_16225001 chr2L_16225001 RAL-853_125b 666 chr2L 16242022 16242065 chr2L 16242164 16242207 8 142 26.5 22.0 24.2 0.3 185 chr2L 16242022 5` UTR CG42818 + chr2L 16242114 exon CG42818 + chr2L 16242207 exon CG42818 + chr2L_8_16240001 chr2L_16240001 RAL-853_125b 667 chr2L 16243688 16243847 chr2L 16243791 16243992 8 140 28.0 30.5 29.2 0.3 304 chr2L 16243688 exon CG42818 + chr2L 16243840 exon CG42818 + chr2L 16243992 exon CG42818 + chr2L_8_16240001 chr2L_16240001 RAL-853_125b 668 chr2L 16254842 16254917 chr2L 16255151 16255226 7 309 20.0 18.5 19.2 0.3 384 chr2L 16254842 intron PRL-1 - chr2L 16255034 intron PRL-1 - chr2L 16255226 intron PRL-1 - chr2L_7_16255001 chr2L_16255001 RAL-853_125b 669 chr2L 16280235 16280264 chr2L 16281456 16281485 1360 21 1218 17.0 17.5 17.2 1.2 1250 chr2L 16280235 intron crp - chr2L 16280860 intron crp - chr2L 16281485 intron crp - chr2L_21_16280001 chr2L_16280001 RAL-853_125b 670 chr2L 16280266 16280285 chr2L 16281448 16281480 1360 8 1206 11.5 15.5 13.5 0.6 1214 chr2L 16280266 intron crp - chr2L 16280873 intron crp - chr2L 16281480 intron crp - chr2L_8_16280001 chr2L_16280001 RAL-853_125b 671 chr2L 16354726 16354783 chr2L 16354867 16354925 22 141 7.0 8.0 7.5 2.6 199 chr2L 16354726 intergenic CaBP1 -,CG4455 + chr2L 16354826 intergenic CaBP1 -,CG4455 + chr2L 16354925 3` UTR CaBP1 - chr2L_22_16350001 chr2L_16350001 RAL-853_125b 672 chr2L 16363911 16363971 chr2L 16364207 16364267 7 292 15.0 28.0 21.5 0.3 356 chr2L 16363911 intergenic not near genes chr2L 16364089 intergenic not near genes chr2L 16364267 intergenic not near genes chr2L_7_16360001 chr2L_16360001 RAL-853_125b 673 chr2L 16389792 16389809 chr2L 16389926 16389943 4 134 16.5 11.0 13.8 0.3 151 chr2L 16389792 intergenic not near genes chr2L 16389868 intergenic not near genes chr2L 16389943 intergenic not near genes chr2L_4_16385001 chr2L_16385001 RAL-853_125b 674 chr2L 16391762 16391812 chr2L 16391888 16391938 10 126 8.5 4.0 6.2 1.4 176 chr2L 16391762 intergenic not near genes chr2L 16391850 intergenic not near genes chr2L 16391938 intergenic not near genes chr2L_10_16390001 chr2L_16390001 RAL-853_125b 675 chr2L 16408103 16408155 chr2L 16408233 16408307 4 149 0.0 4.0 2.0 1.3 204 chr2L 16408103 intron CG5888 - chr2L 16408205 intron CG5888 - chr2L 16408307 intron CG5888 - chr2L_4_16405001 chr2L_16405001 RAL-853_125b 676 chr2L 16434060 16434115 chr2L 16434192 16434247 7 132 20.5 20.0 20.2 0.3 187 chr2L 16434060 intron CG5888 - chr2L 16434154 intron CG5888 - chr2L 16434247 intron CG5888 - chr2L_7_16430001 chr2L_16430001 RAL-853_125b 677 chr2L 16497152 16497206 chr2L 16497300 16497354 17 148 13.0 11.0 12.0 1.3 202 chr2L 16497152 intron Tpr2 + chr2L 16497253 intron Tpr2 + chr2L 16497354 intron Tpr2 + chr2L_17_16495001 chr2L_16495001 RAL-853_125b 678 chr2L 16504977 16504998 chr2L 16505137 16505143 7 158 15.5 34.5 25.0 0.3 166 chr2L 16504977 intron Tpr2 + chr2L 16505060 intron Tpr2 + chr2L 16505143 intron Tpr2 + chr2L_7_16505001 chr2L_16505001 RAL-853_125b 679 chr2L 16507889 16507965 chr2L 16508022 16508103 13 136 0.0 8.5 4.2 2.5 214 chr2L 16507889 intergenic CG5953 -,Tpr2 + chr2L 16507996 intergenic CG5953 -,Tpr2 + chr2L 16508103 3` UTR CG5953 - chr2L_13_16505001 chr2L_16505001 RAL-853_125b 680 chr2L 16511920 16511970 chr2L 16519092 16519134 HMS-Beagle 16 7169 10.5 9.5 10.0 1.5 7214 chr2L 16511920 intron CG5953 - chr2L 16515527 intron CG5953 - chr2L 16519134 intron CG5953 - chr2L_16_16515001 chr2L_16515001 RAL-853_125b 681 chr2L 16570814 16570866 chr2L 16570940 16570992 11 126 2.5 7.0 4.8 1.9 178 chr2L 16570814 intron CG42389 + chr2L 16570903 intron CG42389 + chr2L 16570992 intron CG42389 + chr2L_11_16570001 chr2L_16570001 RAL-853_125b 682 chr2L 16582667 16582738 chr2L 16583079 16583150 20 412 17.5 15.5 16.5 1.1 483 chr2L 16582667 intron CG42389 + chr2L 16582908 intron CG42389 + chr2L 16583150 intron CG42389 + chr2L_20_16580001 chr2L_16580001 RAL-853_125b 683 chr2L 16589782 16589821 chr2L 16589922 16589961 6 138 20.0 21.0 20.5 0.3 179 chr2L 16589782 intron CG42389 + chr2L 16589872 intron CG42389 + chr2L 16589961 intron CG42389 + chr2L_6_16585001 chr2L_16585001 RAL-853_125b 684 chr2L 16631327 16631387 chr2L 16631464 16631525 13 138 8.0 13.5 10.8 1.1 198 chr2L 16631327 intron CG42389 + chr2L 16631426 intron CG42389 + chr2L 16631525 intron CG42389 + chr2L_13_16630001 chr2L_16630001 RAL-853_125b 685 chr2L 16645185 16645207 chr2L 16645673 16645701 4 492 12.5 11.0 11.8 0.3 516 chr2L 16645185 intron CG42389 + chr2L 16645443 intron CG42389 + chr2L 16645701 intron CG42389 + chr2L_4_16645001 chr2L_16645001 RAL-853_125b 686 chr2L 16645212 16645224 chr2L 16645663 16645709 7 475 11.0 10.5 10.8 0.6 497 chr2L 16645212 intron CG42389 + chr2L 16645460 intron CG42389 + chr2L 16645709 intron CG42389 + chr2L_7_16645001 chr2L_16645001 RAL-853_125b 687 chr2L 16646499 16646555 chr2L 16646669 16646692 5 163 18.5 23.0 20.8 0.2 193 chr2L 16646499 intron CG42389 + chr2L 16646596 intron CG42389 + chr2L 16646692 intron CG42389 + chr2L_5_16645001 chr2L_16645001 RAL-853_125b 688 chr2L 16693888 16693939 chr2L 16694019 16694063 25 129 12.5 22.0 17.2 1.4 175 chr2L 16693888 intron grp + chr2L 16693976 intron grp + chr2L 16694063 intron grp + chr2L_25_16690001 chr2L_16690001 RAL-853_125b 689 chr2L 16697042 16697080 chr2L 16697285 16697292 7 239 3.5 0.0 1.8 2.5 250 chr2L 16697042 intron grp + chr2L 16697167 intron grp + chr2L 16697292 intron grp + chr2L_7_16695001 chr2L_16695001 RAL-853_125b 690 chr2L 16709027 16709104 chr2L 16709161 16709238 15 134 17.5 15.5 16.5 0.9 211 chr2L 16709027 intron CG31808 - chr2L 16709132 intron CG31808 - chr2L 16709238 intron CG31808 - chr2L_15_16705001 chr2L_16705001 RAL-853_125b 691 chr2L 16721290 16721458 chr2L 16721429 16721600 17 141 7.0 10.0 8.5 1.8 310 chr2L 16721290 intron Cyt-c-p + chr2L 16721445 intron Cyt-c-p + chr2L 16721600 intron Cyt-c-p + chr2L_17_16720001 chr2L_16720001 RAL-853_125b 692 chr2L 16722538 16722574 chr2L 16722674 16722710 9 136 12.0 5.5 8.8 0.9 172 chr2L 16722538 3` UTR Cyt-c-p + chr2L 16722624 3` UTR Cyt-c-p + chr2L 16722710 intergenic Cyt-c-p +,VhaSFD - chr2L_9_16720001 chr2L_16720001 RAL-853_125b 693 chr2L 16756728 16756739 chr2L 16756868 16756879 4 140 6.5 4.5 5.5 0.6 151 chr2L 16756728 intron yellow-b + chr2L 16756804 intron yellow-b + chr2L 16756879 intron yellow-b + chr2L_4_16755001 chr2L_16755001 RAL-853_125b 694 chr2L 16764922 16764992 chr2L 16765051 16765122 11 130 11.0 13.0 12.0 0.8 200 chr2L 16764922 intergenic not near genes chr2L 16765022 intergenic not near genes chr2L 16765122 intergenic not near genes chr2L_11_16765001 chr2L_16765001 RAL-853_125b 695 chr2L 16791176 16791238 chr2L 16791312 16791374 18 136 16.0 12.5 14.2 1.2 198 chr2L 16791176 intergenic CG17928 +,Cyt-b5-r - chr2L 16791275 intergenic CG17928 + chr2L 16791374 intergenic CG17928 + chr2L_18_16790001 chr2L_16790001 RAL-853_125b 696 chr2L 16796068 16796101 chr2L 16796219 16796252 6 151 4.5 20.5 12.5 0.4 184 chr2L 16796068 intergenic Ugt36Ba + chr2L 16796160 intergenic Ugt36Ba +,Ugt36Bb + chr2L 16796252 intergenic Ugt36Ba +,Ugt36Bb + chr2L_6_16795001 chr2L_16795001 RAL-853_125b 697 chr2L 16866981 16867036 chr2L 16867126 16867181 20 144 3.5 8.5 6.0 2.9 200 chr2L 16866981 intergenic not near genes chr2L 16867081 intergenic not near genes chr2L 16867181 intergenic not near genes chr2L_20_16865001 chr2L_16865001 RAL-853_125b 698 chr2L 16873228 16873287 chr2L 16873350 16873414 5 125 8.5 7.5 8.0 0.6 186 chr2L 16873228 intron CR31781 + chr2L 16873321 intron CR31781 + chr2L 16873414 intron CR31781 + chr2L_5_16870001 chr2L_16870001 RAL-853_125b 699 chr2L 16880814 16880844 chr2L 16880946 16880976 14 131 17.5 14.5 16.0 0.8 162 chr2L 16880814 intron,intron CG31743 +,CG34313 + chr2L 16880895 intron,intron CG31743 +,CG34313 + chr2L 16880976 intron,intron CG31743 +,CG34313 + chr2L_14_16880001 chr2L_16880001 RAL-853_125b 700 chr2L 16927440 16927494 chr2L 16927565 16927591 19 125 16.0 15.5 15.8 1.1 151 chr2L 16927440 intergenic not near genes chr2L 16927516 intergenic not near genes chr2L 16927591 intergenic not near genes chr2L_19_16925001 chr2L_16925001 RAL-853_125b 701 chr2L 16952723 16952756 chr2L 16952854 16952887 12 131 0.5 2.5 1.5 4.8 164 chr2L 16952723 intergenic not near genes chr2L 16952805 intergenic not near genes chr2L 16952887 intergenic not near genes chr2L_12_16950001 chr2L_16950001 RAL-853_125b 702 chr2L 16958062 16958102 chr2L 16962900 16962940 Doc 10 4838 10.5 7.0 8.8 1.0 4878 chr2L 16958062 intergenic not near genes chr2L 16960501 intergenic not near genes chr2L 16962940 intergenic not near genes chr2L_10_16960001 chr2L_16960001 RAL-853_125b 703 chr2L 16967305 16967373 chr2L 16967448 16967518 10 145 10.0 12.0 11.0 0.8 213 chr2L 16967305 intergenic not near genes chr2L 16967412 intergenic not near genes chr2L 16967518 intergenic not near genes chr2L_10_16965001 chr2L_16965001 RAL-853_125b 704 chr2L 16995490 16995545 chr2L 16995620 16995658 6 121 29.0 30.0 29.5 0.2 168 chr2L 16995490 intergenic not near genes chr2L 16995574 intergenic not near genes chr2L 16995658 intergenic not near genes chr2L_6_16995001 chr2L_16995001 RAL-853_125b 705 chr2L 16998952 16999028 chr2L 16999079 16999156 4 128 0.5 4.5 2.5 1.1 204 chr2L 16998952 intergenic CR45357 +,CR45356 + chr2L 16999054 intergenic CR45357 + chr2L 16999156 intergenic CR45357 + chr2L_4_16995001 chr2L_16995001 RAL-853_125b 706 chr2L 17000079 17000145 chr2L 17000251 17000307 9 170 22.5 27.0 24.8 0.3 228 chr2L 17000079 intergenic not near genes chr2L 17000193 intergenic not near genes chr2L 17000307 intergenic not near genes chr2L_9_17000001 chr2L_17000001 RAL-853_125b 707 chr2L 17005370 17005431 chr2L 17005510 17005563 26 144 7.0 14.0 10.5 2.3 193 chr2L 17005370 intergenic not near genes chr2L 17005466 intergenic not near genes chr2L 17005563 intergenic not near genes chr2L_26_17005001 chr2L_17005001 RAL-853_125b 708 chr2L 17032451 17032522 chr2L 17032586 17032657 17 134 11.0 10.0 10.5 1.5 206 chr2L 17032451 intergenic not near genes chr2L 17032554 intergenic not near genes chr2L 17032657 intergenic not near genes chr2L_17_17030001 chr2L_17030001 RAL-853_125b 709 chr2L 17070160 17070193 chr2L 17070306 17070339 4 146 15.5 5.0 10.2 0.4 179 chr2L 17070160 intergenic not near genes chr2L 17070250 intergenic not near genes chr2L 17070339 intergenic not near genes chr2L_4_17070001 chr2L_17070001 RAL-853_125b 710 chr2L 17111798 17111863 chr2L 17111946 17112011 18 148 10.5 7.0 8.8 1.8 213 chr2L 17111798 intergenic not near genes chr2L 17111904 intergenic not near genes chr2L 17112011 intergenic not near genes chr2L_18_17110001 chr2L_17110001 RAL-853_125b 711 chr2L 17120800 17120873 chr2L 17120929 17120931 25 126 4.0 7.0 5.5 3.8 131 chr2L 17120800 intergenic not near genes chr2L 17120866 intergenic not near genes chr2L 17120931 intergenic not near genes chr2L_25_17120001 chr2L_17120001 RAL-853_125b 712 chr2L 17158682 17158750 chr2L 17158835 17158903 17 152 15.0 12.0 13.5 1.2 221 chr2L 17158682 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158792 intron,intron CG34106 +,beat-IIIa + chr2L 17158903 intron,intron CG34106 +,beat-IIIa + chr2L_17_17155001 chr2L_17155001 RAL-853_125b 713 chr2L 17167520 17167590 chr2L 17167811 17167881 pogo 22 291 8.0 7.5 7.8 2.5 361 chr2L 17167520 intron,intron CG34106 +,beat-IIIa + chr2L 17167700 intron,intron CG34106 +,beat-IIIa + chr2L 17167881 intron,intron CG34106 +,beat-IIIa + chr2L_22_17165001 chr2L_17165001 RAL-853_125b 714 chr2L 17199119 17199190 chr2L 17200636 17200707 hobo 10 1517 4.0 7.5 5.8 1.5 1588 chr2L 17199119 intron beat-IIIc - chr2L 17199913 intron beat-IIIc - chr2L 17200707 intron beat-IIIc - chr2L_10_17195001 chr2L_17195001 RAL-853_125b 715 chr2L 17260841 17260848 chr2L 17260966 17260981 5 131 16.0 11.5 13.8 0.3 140 chr2L 17260841 intergenic beat-IIIc - chr2L 17260911 intergenic beat-IIIc - chr2L 17260981 intergenic beat-IIIc - chr2L_5_17260001 chr2L_17260001 RAL-853_125b 716 chr2L 17273146 17273220 chr2L 17277979 17278018 F-element 22 4829 7.0 3.5 5.2 3.5 4872 chr2L 17273146 intergenic not near genes chr2L 17275582 intergenic not near genes chr2L 17278018 intergenic not near genes chr2L_22_17275001 chr2L_17275001 RAL-853_125b 717 chr2L 17300841 17300913 chr2L 17301133 17301205 18 292 6.5 12.0 9.2 1.8 364 chr2L 17300841 intergenic not near genes chr2L 17301023 intergenic not near genes chr2L 17301205 intergenic not near genes chr2L_18_17300001 chr2L_17300001 RAL-853_125b 718 chr2L 17303396 17303461 chr2L 17303624 17303689 22 224 3.5 6.0 4.8 3.8 293 chr2L 17303396 intergenic not near genes chr2L 17303542 intergenic not near genes chr2L 17303689 intergenic not near genes chr2L_22_17300001 chr2L_17300001 RAL-853_125b 719 chr2L 17327874 17327920 chr2L 17328010 17328053 4 134 27.0 29.0 28.0 0.1 179 chr2L 17327874 intergenic not near genes chr2L 17327964 intergenic not near genes chr2L 17328053 intergenic not near genes chr2L_4_17325001 chr2L_17325001 RAL-853_125b 720 chr2L 17331932 17331940 chr2L 17332063 17332071 5 131 5.5 4.0 4.8 0.9 139 chr2L 17331932 intergenic not near genes chr2L 17332002 intergenic not near genes chr2L 17332071 intergenic not near genes chr2L_5_17330001 chr2L_17330001 RAL-853_125b 721 chr2L 17335479 17335507 chr2L 17336710 17336723 1360 16 1230 8.0 5.5 6.8 2.1 1244 chr2L 17335479 intergenic not near genes chr2L 17336101 intergenic not near genes chr2L 17336723 intergenic not near genes chr2L_16_17335001 chr2L_17335001 RAL-853_125b 722 chr2L 17351907 17351949 chr2L 17352032 17352101 8 149 4.5 4.5 4.5 1.5 194 chr2L 17351907 intergenic not near genes chr2L 17352004 intergenic not near genes chr2L 17352101 intergenic not near genes chr2L_8_17350001 chr2L_17350001 RAL-853_125b 723 chr2L 17359977 17360050 chr2L 17360205 17360278 16 228 5.0 4.0 4.5 2.9 301 chr2L 17359977 intergenic not near genes chr2L 17360128 intergenic not near genes chr2L 17360278 intergenic not near genes chr2L_16_17360001 chr2L_17360001 RAL-853_125b 724 chr2L 17380408 17380474 chr2L 17380728 17380794 15 316 7.5 8.5 8.0 1.7 386 chr2L 17380408 intron Lrch - chr2L 17380601 intron Lrch - chr2L 17380794 intron Lrch - chr2L_15_17380001 chr2L_17380001 RAL-853_125b 725 chr2L 17399841 17399904 chr2L 17400171 17400224 13 328 5.0 18.5 11.8 1.0 383 chr2L 17399841 intron CLIP-190 + chr2L 17400032 intron CLIP-190 + chr2L 17400224 intron CLIP-190 + chr2L_13_17400001 chr2L_17400001 RAL-853_125b 726 chr2L 17419252 17419314 chr2L 17419378 17419440 7 126 9.0 10.0 9.5 0.7 188 chr2L 17419252 intron Dif - chr2L 17419346 intron Dif - chr2L 17419440 intron Dif - chr2L_7_17415001 chr2L_17415001 RAL-853_125b 727 chr2L 17424211 17424292 chr2L 17424419 17424500 8 208 21.0 18.0 19.5 0.4 289 chr2L 17424211 intron Dif - chr2L 17424356 intron Dif - chr2L 17424500 intron Dif - chr2L_8_17420001 chr2L_17420001 RAL-853_125b 728 chr2L 17424664 17424735 chr2L 17424826 17424867 13 160 13.0 10.5 11.8 1.0 203 chr2L 17424664 intron Dif - chr2L 17424766 intron Dif - chr2L 17424867 intron Dif - chr2L_13_17420001 chr2L_17420001 RAL-853_125b 729 chr2L 17431979 17432049 chr2L 17432140 17432205 1360 6 158 0.0 5.0 2.5 1.7 226 chr2L 17431979 intron Dif - chr2L 17432092 intron Dif - chr2L 17432205 intron Dif - chr2L_6_17430001 chr2L_17430001 RAL-853_125b 730 chr2L 17443453 17443529 chr2L 17443590 17443656 24 131 16.5 14.5 15.5 1.5 203 chr2L 17443453 intron dl - chr2L 17443554 intron dl - chr2L 17443656 intron dl - chr2L_24_17440001 chr2L_17440001 RAL-853_125b 731 chr2L 17466380 17466448 chr2L 17466519 17466591 24 141 19.5 22.0 20.8 1.1 211 chr2L 17466380 intron BicD - chr2L 17466486 intron BicD - chr2L 17466591 intron BicD - chr2L_24_17465001 chr2L_17465001 RAL-853_125b 732 chr2L 17511586 17511660 chr2L 17511778 17511852 21 192 7.0 6.5 6.8 2.7 266 chr2L 17511586 exon Dhc36C + chr2L 17511719 intron Dhc36C + chr2L 17511852 exon Dhc36C + chr2L_21_17510001 chr2L_17510001 RAL-853_125b 733 chr2L 17577684 17577738 chr2L 17577810 17577864 16 126 26.0 26.5 26.2 0.6 180 chr2L 17577684 intergenic not near genes chr2L 17577774 intergenic not near genes chr2L 17577864 intergenic not near genes chr2L_16_17575001 chr2L_17575001 RAL-853_125b 734 chr2L 17607442 17607468 chr2L 17607590 17607616 7 148 18.0 22.0 20.0 0.3 174 chr2L 17607442 intergenic CR44412 - chr2L 17607529 intergenic CR44412 - chr2L 17607616 intergenic CR44412 - chr2L_7_17605001 chr2L_17605001 RAL-853_125b 735 chr2L 17618124 17618181 chr2L 17618503 17618552 15 376 10.5 15.0 12.8 1.1 428 chr2L 17618124 intergenic not near genes chr2L 17618338 intergenic not near genes chr2L 17618552 intergenic not near genes chr2L_15_17615001 chr2L_17615001 RAL-853_125b 736 chr2L 17664606 17664671 chr2L 17664761 17664826 10 152 17.0 17.0 17.0 0.6 220 chr2L 17664606 intron CadN - chr2L 17664716 intron CadN - chr2L 17664826 intron CadN - chr2L_10_17660001 chr2L_17660001 RAL-853_125b 737 chr2L 17680947 17680985 chr2L 17681073 17681111 6 126 22.5 19.5 21.0 0.3 164 chr2L 17680947 intron CadN - chr2L 17681029 intron CadN - chr2L 17681111 intron CadN - chr2L_6_17680001 chr2L_17680001 RAL-853_125b 738 chr2L 17687467 17687519 chr2L 17692262 17692314 F-element 29 4794 10.0 9.5 9.8 2.7 4847 chr2L 17687467 intron CadN - chr2L 17689890 intron CadN - chr2L 17692314 intron CadN - chr2L_29_17685001 chr2L_17685001 RAL-853_125b 739 chr2L 17727823 17727855 chr2L 17729340 17729372 hobo 11 1514 7.5 11.5 9.5 1.0 1549 chr2L 17727823 intron CadN - chr2L 17728598 intron CadN - chr2L 17729372 intron CadN - chr2L_11_17725001 chr2L_17725001 RAL-853_125b 740 chr2L 17727864 17727871 chr2L 17729352 17729388 hobo 5 1507 5.5 14.5 10.0 0.5 1524 chr2L 17727864 intron CadN - chr2L 17728626 intron CadN - chr2L 17729388 intron CadN - chr2L_5_17725001 chr2L_17725001 RAL-853_125b 741 chr2L 17730930 17730992 chr2L 17731127 17731185 25 196 16.0 15.0 15.5 1.5 255 chr2L 17730930 intron CadN - chr2L 17731058 intron CadN - chr2L 17731185 intron CadN - chr2L_25_17730001 chr2L_17730001 RAL-853_125b 742 chr2L 17767285 17767356 chr2L 17767562 17767633 16 277 8.5 5.5 7.0 2.0 348 chr2L 17767285 intron CadN - chr2L 17767459 intron CadN - chr2L 17767633 intron CadN - chr2L_16_17765001 chr2L_17765001 RAL-853_125b 743 chr2L 17769420 17769457 chr2L 17769568 17769605 4 148 15.0 12.5 13.8 0.3 185 chr2L 17769420 intron CadN - chr2L 17769512 intron CadN - chr2L 17769605 intron CadN - chr2L_4_17765001 chr2L_17765001 RAL-853_125b 744 chr2L 17773138 17773184 chr2L 17773345 17773391 6 207 24.5 24.0 24.2 0.2 253 chr2L 17773138 intron CadN - chr2L 17773264 intron CadN - chr2L 17773391 intron CadN - chr2L_6_17770001 chr2L_17770001 RAL-853_125b 745 chr2L 17795269 17795325 chr2L 17795423 17795479 8 154 21.5 25.5 23.5 0.3 210 chr2L 17795269 intron CadN2 - chr2L 17795374 intron CadN2 - chr2L 17795479 intron CadN2 - chr2L_8_17795001 chr2L_17795001 RAL-853_125b 746 chr2L 17795983 17796042 chr2L 17796114 17796173 17 130 13.5 8.5 11.0 1.4 190 chr2L 17795983 intron CadN2 - chr2L 17796078 intron CadN2 - chr2L 17796173 intron CadN2 - chr2L_17_17795001 chr2L_17795001 RAL-853_125b 747 chr2L 17819882 17819944 chr2L 17825135 17825197 copia 23 5253 8.0 11.5 9.8 2.1 5315 chr2L 17819882 intron CadN2 - chr2L 17822540 intron CadN2 - chr2L 17825197 intron CadN2 - chr2L_23_17820001 chr2L_17820001 RAL-853_125b 748 chr2L 17863591 17863630 chr2L 17863796 17863835 5 205 23.0 17.0 20.0 0.2 244 chr2L 17863591 intron CadN2 - chr2L 17863713 intron CadN2 - chr2L 17863835 intron CadN2 - chr2L_5_17860001 chr2L_17860001 RAL-853_125b 749 chr2L 17879968 17880027 chr2L 17880105 17880164 5 137 26.0 24.0 25.0 0.2 196 chr2L 17879968 intergenic not near genes chr2L 17880066 intergenic not near genes chr2L 17880164 intergenic not near genes chr2L_5_17880001 chr2L_17880001 RAL-853_125b 750 chr2L 17880543 17880619 chr2L 17880705 17880773 21 162 16.0 16.5 16.2 1.2 230 chr2L 17880543 intergenic not near genes chr2L 17880658 intergenic not near genes chr2L 17880773 intergenic not near genes chr2L_21_17880001 chr2L_17880001 RAL-853_125b 751 chr2L 17891428 17891491 chr2L 17891556 17891619 10 127 17.5 23.0 20.2 0.5 191 chr2L 17891428 intergenic not near genes chr2L 17891524 intergenic not near genes chr2L 17891619 intergenic not near genes chr2L_10_17890001 chr2L_17890001 RAL-853_125b 752 chr2L 17897570 17897632 chr2L 17897693 17897732 19 130 10.0 13.0 11.5 1.5 162 chr2L 17897570 intergenic not near genes chr2L 17897651 intergenic not near genes chr2L 17897732 intergenic not near genes chr2L_19_17895001 chr2L_17895001 RAL-853_125b 753 chr2L 17910672 17910741 chr2L 17910831 17910900 26 159 10.0 13.5 11.8 2.0 228 chr2L 17910672 intergenic not near genes chr2L 17910786 intergenic not near genes chr2L 17910900 intergenic not near genes chr2L_26_17910001 chr2L_17910001 RAL-853_125b 754 chr2L 17911917 17911987 chr2L 17914153 17914193 pogo 25 2231 9.0 6.5 7.8 2.8 2276 chr2L 17911917 intergenic not near genes chr2L 17913055 intergenic not near genes chr2L 17914193 intergenic CG43271 - chr2L_25_17910001 chr2L_17910001 RAL-853_125b 755 chr2L 17944380 17944428 chr2L 17944593 17944641 9 213 18.0 18.0 18.0 0.5 261 chr2L 17944380 intergenic not near genes chr2L 17944510 intergenic not near genes chr2L 17944641 intergenic not near genes chr2L_9_17940001 chr2L_17940001 RAL-853_125b 756 chr2L 17951904 17951969 chr2L 17953421 17953486 hobo 27 1517 10.5 7.0 8.8 2.8 1582 chr2L 17951904 intergenic CR44398 -,CR44397 - chr2L 17952695 intergenic not near genes chr2L 17953486 intergenic not near genes chr2L_27_17950001 chr2L_17950001 RAL-853_125b 757 chr2L 17989982 17990007 chr2L 17990092 17990107 6 114 15.5 19.5 17.5 0.3 125 chr2L 17989982 intergenic Prosbeta5R2 + chr2L 17990044 intergenic Prosbeta5R2 + chr2L 17990107 intergenic Prosbeta5R2 + chr2L_6_17990001 chr2L_17990001 RAL-853_125b 758 chr2L 18020705 18020764 chr2L 18020842 18020901 19 137 5.5 7.0 6.2 2.6 196 chr2L 18020705 intron rdo + chr2L 18020803 intron rdo + chr2L 18020901 intron rdo + chr2L_19_18020001 chr2L_18020001 RAL-853_125b 759 chr2L 18026937 18027007 chr2L 18027327 18027397 24 390 6.5 1.5 4.0 4.8 460 chr2L 18026937 intron rdo + chr2L 18027167 intron rdo + chr2L 18027397 intron rdo + chr2L_24_18025001 chr2L_18025001 RAL-853_125b 760 chr2L 18051833 18051899 chr2L 18061029 18061096 roo 28 9196 12.5 9.5 11.0 2.3 9263 chr2L 18051833 intron rdo + chr2L 18056464 intron rdo + chr2L 18061096 intron rdo + chr2L_28_18055001 chr2L_18055001 RAL-853_125b 761 chr2L 18073382 18073449 chr2L 18073546 18073613 13 164 14.0 20.0 17.0 0.7 231 chr2L 18073382 intergenic not near genes chr2L 18073498 intergenic not near genes chr2L 18073613 intergenic not near genes chr2L_13_18070001 chr2L_18070001 RAL-853_125b 762 chr2L 18111193 18111211 chr2L 18111334 18111347 6 140 25.5 10.0 17.8 0.3 154 chr2L 18111193 intergenic not near genes chr2L 18111270 intergenic not near genes chr2L 18111347 intergenic not near genes chr2L_6_18110001 chr2L_18110001 RAL-853_125b 763 chr2L 18158869 18158930 chr2L 18158999 18159060 13 127 13.0 14.5 13.8 0.9 191 chr2L 18158869 5` UTR CG7200 - chr2L 18158964 5` UTR CG7200 - chr2L 18159060 intron CG7200 - chr2L_13_18155001 chr2L_18155001 RAL-853_125b 764 chr2L 18220539 18220607 chr2L 18220768 18220836 16 225 11.0 15.0 13.0 1.1 297 chr2L 18220539 intron CG42750 - chr2L 18220688 intron CG42750 - chr2L 18220836 intron CG42750 - chr2L_16_18220001 chr2L_18220001 RAL-853_125b 765 chr2L 18231097 18231107 chr2L 18231232 18231242 6 135 17.5 10.0 13.8 0.4 145 chr2L 18231097 intron CG42750 - chr2L 18231170 intron CG42750 - chr2L 18231242 intron CG42750 - chr2L_6_18230001 chr2L_18230001 RAL-853_125b 766 chr2L 18274001 18274054 chr2L 18274137 18274190 23 134 15.0 8.5 11.8 1.8 189 chr2L 18274001 intron CG42750 - chr2L 18274096 intron CG42750 - chr2L 18274190 intron CG42750 - chr2L_23_18270001 chr2L_18270001 RAL-853_125b 767 chr2L 18296912 18296947 chr2L 18297038 18297063 17 125 21.5 18.5 20.0 0.8 151 chr2L 18296912 exon CG5790 + chr2L 18296988 exon CG5790 + chr2L 18297063 exon CG5790 + chr2L_17_18295001 chr2L_18295001 RAL-853_125b 768 chr2L 18300223 18300263 chr2L 18300354 18300374 15 126 12.0 25.5 18.8 0.8 151 chr2L 18300223 intergenic not near genes chr2L 18300298 intergenic not near genes chr2L 18300374 intergenic not near genes chr2L_15_18300001 chr2L_18300001 RAL-853_125b 769 chr2L 18303927 18303997 chr2L 18304068 18304138 21 141 9.5 16.0 12.8 1.5 211 chr2L 18303927 intergenic not near genes chr2L 18304032 intergenic not near genes chr2L 18304138 intergenic not near genes chr2L_21_18300001 chr2L_18300001 RAL-853_125b 770 chr2L 18334573 18334638 chr2L 18334708 18334773 21 134 15.0 12.0 13.5 1.4 200 chr2L 18334573 intron Fas3 + chr2L 18334673 intron Fas3 + chr2L 18334773 intron Fas3 + chr2L_21_18330001 chr2L_18330001 RAL-853_125b 771 chr2L 18407985 18408043 chr2L 18412819 18412877 Doc 25 4834 5.5 8.0 6.8 3.2 4892 chr2L 18407985 intergenic not near genes chr2L 18410431 intergenic not near genes chr2L 18412877 intergenic not near genes chr2L_25_18410001 chr2L_18410001 RAL-853_125b 772 chr2L 18425281 18425346 chr2L 18425596 18425661 21 315 13.0 11.5 12.2 1.6 380 chr2L 18425281 intergenic not near genes chr2L 18425471 intergenic not near genes chr2L 18425661 intergenic not near genes chr2L_21_18425001 chr2L_18425001 RAL-853_125b 773 chr2L 18519415 18519444 chr2L 18523118 18523147 4 3704 39.5 40.0 39.8 0.1 3732 chr2L 18519415 intron CG10211 + chr2L 18521281 intron CG10211 + chr2L 18523147 intron CG10211 + chr2L_4_18520001 chr2L_18520001 RAL-853_125b 774 chr2L 18584698 18584771 chr2L 18584835 18584906 5 136 17.0 17.5 17.2 0.3 208 chr2L 18584698 intron Pde11 - chr2L 18584802 intron Pde11 - chr2L 18584906 intron Pde11 - chr2L_5_18580001 chr2L_18580001 RAL-853_125b 775 chr2L 18759552 18759612 chr2L 18759748 18759814 22 201 8.5 11.5 10.0 2.0 262 chr2L 18759552 intergenic not near genes chr2L 18759683 intergenic not near genes chr2L 18759814 intergenic not near genes chr2L_22_18755001 chr2L_18755001 RAL-853_125b 776 chr2L 18766410 18766468 chr2L 18766581 18766635 5 168 13.5 5.5 9.5 0.5 225 chr2L 18766410 intron ham - chr2L 18766522 intron ham - chr2L 18766635 intron ham - chr2L_5_18765001 chr2L_18765001 RAL-853_125b 777 chr2L 18771737 18771784 chr2L 18771871 18771921 14 132 16.0 15.5 15.8 0.8 184 chr2L 18771737 intron ham - chr2L 18771829 intron ham - chr2L 18771921 intron ham - chr2L_14_18770001 chr2L_18770001 RAL-853_125b 778 chr2L 18790297 18790310 chr2L 18791067 18791080 4 770 40.5 47.0 43.8 0.1 783 chr2L 18790297 intron ham - chr2L 18790688 intron ham - chr2L 18791080 intron ham - chr2L_4_18790001 chr2L_18790001 RAL-853_125b 779 chr2L 18790322 18790366 chr2L 18791092 18791136 6 770 44.5 42.0 43.2 0.1 814 chr2L 18790322 intron ham - chr2L 18790729 intron ham - chr2L 18791136 intron ham - chr2L_6_18790001 chr2L_18790001 RAL-853_125b 780 chr2L 18811384 18811427 chr2L 18811516 18811559 14 132 3.5 5.0 4.2 2.7 175 chr2L 18811384 intergenic CG10570 -,CG42502 - chr2L 18811472 intergenic CG10570 -,CG42502 - chr2L 18811559 intergenic not near genes chr2L_14_18810001 chr2L_18810001 RAL-853_125b 781 chr2L 18812523 18812589 chr2L 18812820 18812902 25 316 0.5 6.0 3.2 6.0 379 chr2L 18812523 intergenic CG17325 +,CG42305 + chr2L 18812712 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812902 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_25_18810001 chr2L_18810001 RAL-853_125b 782 chr2L 18876818 18876884 chr2L 18876946 18877012 32 128 8.5 7.0 7.8 3.6 194 chr2L 18876818 intron tup - chr2L 18876915 intron tup - chr2L 18877012 intron tup - chr2L_32_18875001 chr2L_18875001 RAL-853_125b 783 chr2L 18902579 18902635 chr2L 18902910 18902966 18 331 5.0 5.5 5.2 2.9 387 chr2L 18902579 intergenic not near genes chr2L 18902772 intergenic not near genes chr2L 18902966 intergenic not near genes chr2L_18_18900001 chr2L_18900001 RAL-853_125b 784 chr2L 18903051 18903123 chr2L 18903198 18903270 5 147 9.5 12.0 10.8 0.4 219 chr2L 18903051 intergenic not near genes chr2L 18903160 intergenic not near genes chr2L 18903270 intergenic not near genes chr2L_5_18900001 chr2L_18900001 RAL-853_125b 785 chr2L 18945711 18945791 chr2L 18945838 18945881 27 122 10.5 15.0 12.8 2.0 170 chr2L 18945711 5` UTR CR44740 + chr2L 18945796 5` UTR CR44740 + chr2L 18945881 5` UTR CR44740 + chr2L_27_18945001 chr2L_18945001 RAL-853_125b 786 chr2L 18962186 18962255 chr2L 18962331 18962400 4 145 1.0 6.0 3.5 0.9 214 chr2L 18962186 intron Nak - chr2L 18962293 intron Nak - chr2L 18962400 intron Nak - chr2L_4_18960001 chr2L_18960001 RAL-853_125b 787 chr2L 18981704 18981778 chr2L 18981831 18981905 15 125 15.0 13.0 14.0 1.0 201 chr2L 18981704 intron Swip-1 - chr2L 18981804 intron Swip-1 - chr2L 18981905 intron Swip-1 - chr2L_15_18980001 chr2L_18980001 RAL-853_125b 788 chr2L 18984205 18984278 chr2L 18984332 18984405 26 125 14.0 14.5 14.2 1.7 200 chr2L 18984205 intron Swip-1 - chr2L 18984305 intron Swip-1 - chr2L 18984405 intron Swip-1 - chr2L_26_18980001 chr2L_18980001 RAL-853_125b 789 chr2L 18990270 18990339 chr2L 18990431 18990500 29 161 8.0 7.5 7.8 3.3 230 chr2L 18990270 intergenic CG15170 - chr2L 18990385 intergenic CG15170 - chr2L 18990500 intergenic CG15170 - chr2L_29_18990001 chr2L_18990001 RAL-853_125b 790 chr2L 19016197 19016270 chr2L 19016343 19016416 10 146 12.0 14.0 13.0 0.7 219 chr2L 19016197 intergenic not near genes chr2L 19016306 intergenic not near genes chr2L 19016416 intergenic not near genes chr2L_10_19015001 chr2L_19015001 RAL-853_125b 791 chr2L 19018241 19018313 chr2L 19018367 19018412 15 125 18.5 18.5 18.5 0.8 171 chr2L 19018241 intergenic not near genes chr2L 19018326 intergenic not near genes chr2L 19018412 intergenic not near genes chr2L_15_19015001 chr2L_19015001 RAL-853_125b 792 chr2L 19024096 19024097 chr2L 21768291 21768291 4 2744195 26.0 29.5 27.8 0.1 2744195 chr2L 19024096 3` UTR CR43700 - chr2L 20396194 intron CG10947 - chr2L 21768291 intron CG31612 - chr2L_4_20395001 chr2L_20395001 RAL-853_125b 793 chr2L 19035881 19035926 chr2L 19036012 19036066 14 135 23.0 17.0 20.0 0.7 185 chr2L 19035881 intron mib2 + chr2L 19035974 intron mib2 + chr2L 19036066 intron mib2 + chr2L_14_19035001 chr2L_19035001 RAL-853_125b 794 chr2L 19043302 19043330 chr2L 19043434 19043473 8 141 20.5 18.5 19.5 0.4 171 chr2L 19043302 exon Catsup + chr2L 19043388 3` UTR Catsup + chr2L 19043473 3` UTR Catsup + chr2L_8_19040001 chr2L_19040001 RAL-853_125b 795 chr2L 19120996 19121072 chr2L 19121124 19121201 15 128 14.0 11.0 12.5 1.1 205 chr2L 19120996 intergenic l(2)37Cc - chr2L 19121098 intergenic l(2)37Cc - chr2L 19121201 intergenic l(2)37Cc - chr2L_15_19120001 chr2L_19120001 RAL-853_125b 796 chr2L 19121505 19121560 chr2L 19121636 19121691 16 126 15.0 23.5 19.2 0.8 186 chr2L 19121505 3` UTR l(2)37Cc - chr2L 19121598 3` UTR l(2)37Cc - chr2L 19121691 3` UTR l(2)37Cc - chr2L_16_19120001 chr2L_19120001 RAL-853_125b 797 chr2L 19142449 19142500 chr2L 19142589 19142640 8 140 24.0 21.0 22.5 0.3 191 chr2L 19142449 intron brat + chr2L 19142544 intron brat + chr2L 19142640 intron brat + chr2L_8_19140001 chr2L_19140001 RAL-853_125b 798 chr2L 19147258 19147391 chr2L 19154405 19154476 297 16 7138 0.5 5.5 3.0 4.0 7218 chr2L 19147258 intron brat + chr2L 19150867 intron brat + chr2L 19154476 intron brat + chr2L_16_19150001 chr2L_19150001 RAL-853_125b 799 chr2L 19189919 19189986 chr2L 19190123 19190190 17 203 4.5 3.5 4.0 3.4 271 chr2L 19189919 3` UTR pigeon + chr2L 19190054 intergenic pigeon +,drl + chr2L 19190190 intergenic drl +,pigeon + chr2L_17_19190001 chr2L_19190001 RAL-853_125b 800 chr2L 19199629 19199641 chr2L 19199756 19199768 5 124 15.0 7.5 11.2 0.4 139 chr2L 19199629 intron drl + chr2L 19199698 intron drl + chr2L 19199768 intron drl + chr2L_5_19195001 chr2L_19195001 RAL-853_125b 801 chr2L 19199642 19199703 chr2L 19199754 19199778 16 109 9.0 7.0 8.0 1.8 136 chr2L 19199642 intron drl + chr2L 19199710 intron drl + chr2L 19199778 intron drl + chr2L_16_19195001 chr2L_19195001 RAL-853_125b 802 chr2L 19209579 19209645 chr2L 19209714 19209780 17 135 4.5 1.0 2.8 4.5 201 chr2L 19209579 intergenic not near genes chr2L 19209680 intergenic not near genes chr2L 19209780 intergenic not near genes chr2L_17_19205001 chr2L_19205001 RAL-853_125b 803 chr2L 19241009 19241086 chr2L 19241138 19241214 21 127 10.0 8.5 9.2 2.1 205 chr2L 19241009 intergenic not near genes chr2L 19241112 intergenic not near genes chr2L 19241214 intergenic not near genes chr2L_21_19240001 chr2L_19240001 RAL-853_125b 804 chr2L 19344968 19345037 chr2L 19357227 19357296 blood 13 12259 10.5 10.0 10.2 1.2 12328 chr2L 19344968 intron dnt - chr2L 19351132 intron dnt - chr2L 19357296 intron dnt - chr2L_13_19350001 chr2L_19350001 RAL-853_125b 805 chr2L 19357506 19357565 chr2L 19357645 19357695 19 139 10.0 11.0 10.5 1.7 189 chr2L 19357506 intron dnt - chr2L 19357600 intron dnt - chr2L 19357695 intron dnt - chr2L_19_19355001 chr2L_19355001 RAL-853_125b 806 chr2L 19365493 19365565 chr2L 19365619 19365691 10 125 0.0 6.0 3.0 2.5 198 chr2L 19365493 intergenic CG13086 + chr2L 19365592 intergenic CG13086 + chr2L 19365691 intergenic CG13086 + chr2L_10_19365001 chr2L_19365001 RAL-853_125b 807 chr2L 19374444 19374504 chr2L 19374603 19374663 10 157 24.5 21.0 22.8 0.4 219 chr2L 19374444 intergenic not near genes chr2L 19374554 intergenic not near genes chr2L 19374663 intergenic not near genes chr2L_10_19370001 chr2L_19370001 RAL-853_125b 808 chr2L 19374886 19374960 chr2L 19375061 19375135 16 175 12.0 13.5 12.8 1.2 249 chr2L 19374886 intergenic not near genes chr2L 19375010 intergenic not near genes chr2L 19375135 intergenic not near genes chr2L_16_19375001 chr2L_19375001 RAL-853_125b 809 chr2L 19377236 19377259 chr2L 19377365 19377388 5 129 7.0 7.5 7.2 0.6 152 chr2L 19377236 intergenic not near genes chr2L 19377312 intergenic not near genes chr2L 19377388 intergenic not near genes chr2L_5_19375001 chr2L_19375001 RAL-853_125b 810 chr2L 19378299 19378358 chr2L 19378432 19378491 4 133 31.0 28.0 29.5 0.1 192 chr2L 19378299 intergenic not near genes chr2L 19378395 intergenic not near genes chr2L 19378491 intergenic not near genes chr2L_4_19375001 chr2L_19375001 RAL-853_125b 811 chr2L 19384369 19384379 chr2L 19384544 19384554 4 174 19.5 20.5 20.0 0.2 185 chr2L 19384369 exon fon - chr2L 19384462 exon fon - chr2L 19384554 exon fon - chr2L_4_19380001 chr2L_19380001 RAL-853_125b 812 chr2L 19384388 19384404 chr2L 19384536 19384579 11 166 14.5 19.5 17.0 0.6 191 chr2L 19384388 exon fon - chr2L 19384484 exon fon - chr2L 19384579 exon fon - chr2L_11_19380001 chr2L_19380001 RAL-853_125b 813 chr2L 19384406 19384417 chr2L 19384526 19384552 4 134 12.5 15.5 14.0 0.3 146 chr2L 19384406 exon fon - chr2L 19384479 exon fon - chr2L 19384552 exon fon - chr2L_4_19380001 chr2L_19380001 RAL-853_125b 814 chr2L 19405574 19405642 chr2L 19405714 19405782 24 140 2.0 2.5 2.2 7.5 208 chr2L 19405574 intron Pax - chr2L 19405678 intron Pax - chr2L 19405782 intron Pax - chr2L_24_19405001 chr2L_19405001 RAL-853_125b 815 chr2L 19407666 19407740 chr2L 19407913 19407987 43 245 10.0 10.0 10.0 3.9 321 chr2L 19407666 intron Pax - chr2L 19407826 intron Pax - chr2L 19407987 intron Pax - chr2L_43_19405001 chr2L_19405001 RAL-853_125b 816 chr2L 19422095 19422119 chr2L 19422244 19422268 5 148 16.5 13.5 15.0 0.3 173 chr2L 19422095 intron Pax - chr2L 19422182 intron Pax - chr2L 19422268 intron Pax - chr2L_5_19420001 chr2L_19420001 RAL-853_125b 817 chr2L 19437474 19437531 chr2L 19437616 19437673 31 141 8.0 7.5 7.8 3.5 199 chr2L 19437474 intron CG10237 - chr2L 19437574 intron CG10237 - chr2L 19437673 exon CG10237 - chr2L_31_19435001 chr2L_19435001 RAL-853_125b 818 chr2L 19438478 19438501 chr2L 19438613 19438636 6 134 37.0 39.5 38.2 0.2 158 chr2L 19438478 intron CG10237 - chr2L 19438557 intron CG10237 - chr2L 19438636 intron CG10237 - chr2L_6_19435001 chr2L_19435001 RAL-853_125b 819 chr2L 19460155 19460221 chr2L 19460297 19460363 13 142 14.0 18.5 16.2 0.8 208 chr2L 19460155 intergenic not near genes chr2L 19460259 intergenic not near genes chr2L 19460363 intergenic not near genes chr2L_13_19460001 chr2L_19460001 RAL-853_125b 820 chr2L 19468894 19468973 chr2L 19469043 19469125 20 150 5.5 6.5 6.0 2.9 231 chr2L 19468894 intergenic CR45722 + chr2L 19469010 intergenic CR45722 + chr2L 19469125 5` UTR CR45722 + chr2L_20_19465001 chr2L_19465001 RAL-853_125b 821 chr2L 19543081 19543120 chr2L 19543215 19543248 15 133 29.5 15.0 22.2 0.6 167 chr2L 19543081 intron ref(2)P + chr2L 19543164 intron ref(2)P + chr2L 19543248 intron ref(2)P + chr2L_15_19540001 chr2L_19540001 RAL-853_125b 822 chr2L 19543123 19543131 chr2L 19543257 19543265 4 134 26.0 13.5 19.8 0.2 142 chr2L 19543123 intron ref(2)P + chr2L 19543194 intron ref(2)P + chr2L 19543265 intron ref(2)P + chr2L_4_19540001 chr2L_19540001 RAL-853_125b 823 chr2L 19543132 19543142 chr2L 19543236 19543276 4 125 26.0 13.0 19.5 0.2 144 chr2L 19543132 intron ref(2)P + chr2L 19543204 intron ref(2)P + chr2L 19543276 intron ref(2)P + chr2L_4_19540001 chr2L_19540001 RAL-853_125b 824 chr2L 19557777 19557982 chr2L 19557919 19558106 14 137 13.0 14.5 13.8 0.9 329 chr2L 19557777 intergenic Tep5 + chr2L 19557942 intergenic Tep5 + chr2L 19558106 exon Tep5 + chr2L_14_19555001 chr2L_19555001 RAL-853_125b 825 chr2L 19558482 19558523 chr2L 19558636 19558677 12 154 9.0 10.0 9.5 1.1 195 chr2L 19558482 intron Tep5 + chr2L 19558580 intron Tep5 + chr2L 19558677 intron Tep5 + chr2L_12_19555001 chr2L_19555001 RAL-853_125b 826 chr2L 19559960 19560034 chr2L 19560263 19560336 22 302 23.5 24.0 23.8 0.9 376 chr2L 19559960 exon Tep5 + chr2L 19560148 exon Tep5 + chr2L 19560336 intron Tep5 + chr2L_22_19560001 chr2L_19560001 RAL-853_125b 827 chr2L 19561301 19561359 chr2L 19561483 19561550 16 190 16.5 15.0 15.8 1.0 249 chr2L 19561301 exon Tep5 + chr2L 19561426 exon Tep5 + chr2L 19561550 exon Tep5 + chr2L_16_19560001 chr2L_19560001 RAL-853_125b 828 chr2L 19562487 19562559 chr2L 19562618 19562689 7 129 26.0 29.0 27.5 0.2 202 chr2L 19562487 exon Tep5 + chr2L 19562588 intron Tep5 + chr2L 19562689 exon Tep5 + chr2L_7_19560001 chr2L_19560001 RAL-853_125b 829 chr2L 19597252 19597272 chr2L 19597535 19597554 5 283 38.0 36.5 37.2 0.1 302 chr2L 19597252 intron Lar + chr2L 19597403 intron Lar + chr2L 19597554 intron Lar + chr2L_5_19595001 chr2L_19595001 RAL-853_125b 830 chr2L 19601523 19601599 chr2L 19601649 19601726 18 126 11.5 16.0 13.8 1.2 203 chr2L 19601523 intron,intron Lar +,CR44978 - chr2L 19601624 intron,intron Lar +,CR44978 - chr2L 19601726 intron,intron Lar +,CR44978 - chr2L_18_19600001 chr2L_19600001 RAL-853_125b 831 chr2L 19608559 19608610 chr2L 19608700 19608751 6 141 21.5 18.5 20.0 0.3 192 chr2L 19608559 intron Lar + chr2L 19608655 intron Lar + chr2L 19608751 intron Lar + chr2L_6_19605001 chr2L_19605001 RAL-853_125b 832 chr2L 19620055 19620060 chr2L 19621094 19621099 jockey 4 1039 31.5 10.0 20.8 0.2 1044 chr2L 19620055 intron Lar + chr2L 19620577 intron Lar + chr2L 19621099 intron Lar + chr2L_4_19620001 chr2L_19620001 RAL-853_125b 833 chr2L 19620061 19620105 chr2L 19621093 19621144 jockey 25 1033 20.0 10.0 15.0 1.6 1083 chr2L 19620061 intron Lar + chr2L 19620602 intron Lar + chr2L 19621144 intron Lar + chr2L_25_19620001 chr2L_19620001 RAL-853_125b 834 chr2L 19638509 19638560 chr2L 19638647 19638698 5 138 28.5 31.0 29.8 0.2 189 chr2L 19638509 intron Lar + chr2L 19638604 intron Lar + chr2L 19638698 intron Lar + chr2L_5_19635001 chr2L_19635001 RAL-853_125b 835 chr2L 19652521 19652597 chr2L 19674007 19674080 opus 26 21485 5.5 6.0 5.8 3.8 21559 chr2L 19652521 intron Lar + chr2L 19663300 intron Lar + chr2L 19674080 intron Lar + chr2L_26_19660001 chr2L_19660001 RAL-853_125b 836 chr2L 19703500 19703561 chr2L 19712683 19712747 roo 28 9186 9.5 10.0 9.8 2.6 9247 chr2L 19703500 intron Lar + chr2L 19708124 intron Lar + chr2L 19712747 intron Lar + chr2L_28_19705001 chr2L_19705001 RAL-853_125b 837 chr2L 19713569 19713589 chr2L 19713752 19713772 15 183 22.0 24.5 23.2 0.6 203 chr2L 19713569 intron Lar + chr2L 19713670 intron Lar + chr2L 19713772 intron Lar + chr2L_15_19710001 chr2L_19710001 RAL-853_125b 838 chr2L 19718492 19718511 chr2L 19718623 19718642 8 129 19.0 18.5 18.8 0.4 150 chr2L 19718492 intron Lar + chr2L 19718567 intron Lar + chr2L 19718642 intron Lar + chr2L_8_19715001 chr2L_19715001 RAL-853_125b 839 chr2L 19737316 19737353 chr2L 19740830 19740872 1360 9 3513 19.0 12.5 15.8 0.5 3556 chr2L 19737316 intergenic Nf-YB + chr2L 19739094 intergenic not near genes chr2L 19740872 intergenic not near genes chr2L_9_19735001 chr2L_19735001 RAL-853_125b 840 chr2L 19737364 19737376 chr2L 19740825 19740895 1360 10 3511 14.0 11.5 12.8 0.7 3531 chr2L 19737364 intergenic Nf-YB + chr2L 19739130 intergenic not near genes chr2L 19740895 intergenic not near genes chr2L_10_19735001 chr2L_19735001 RAL-853_125b 841 chr2L 19762761 19762832 chr2L 19763053 19763124 pogo 24 290 13.5 6.0 9.8 2.2 363 chr2L 19762761 exon fbp - chr2L 19762942 intron fbp - chr2L 19763124 intron fbp - chr2L_24_19760001 chr2L_19760001 RAL-853_125b 842 chr2L 19773120 19773178 chr2L 19773257 19773315 13 137 25.5 24.0 24.8 0.5 195 chr2L 19773120 intergenic not near genes chr2L 19773218 intergenic not near genes chr2L 19773315 intergenic not near genes chr2L_13_19770001 chr2L_19770001 RAL-853_125b 843 chr2L 19776624 19776660 chr2L 19776749 19776789 11 129 19.0 20.0 19.5 0.5 165 chr2L 19776624 3` UTR CdGAPr - chr2L 19776706 3` UTR CdGAPr - chr2L 19776789 3` UTR CdGAPr - chr2L_11_19775001 chr2L_19775001 RAL-853_125b 844 chr2L 19823215 19823298 chr2L 19823346 19823437 20 137 7.0 3.0 5.0 3.3 222 chr2L 19823215 intron sick + chr2L 19823326 intron sick + chr2L 19823437 intron sick + chr2L_20_19820001 chr2L_19820001 RAL-853_125b 845 chr2L 19824363 19824421 chr2L 19824496 19824554 5 133 24.0 26.5 25.2 0.2 191 chr2L 19824363 intron sick + chr2L 19824458 intron sick + chr2L 19824554 intron sick + chr2L_5_19820001 chr2L_19820001 RAL-853_125b 846 chr2L 19837229 19837309 chr2L 19837359 19837438 41 129 11.5 6.5 9.0 4.1 209 chr2L 19837229 intron sick + chr2L 19837334 intron sick + chr2L 19837438 intron sick + chr2L_41_19835001 chr2L_19835001 RAL-853_125b 847 chr2L 19844150 19844217 chr2L 19844284 19844351 10 134 10.5 5.5 8.0 1.1 201 chr2L 19844150 intron sick + chr2L 19844250 intron sick + chr2L 19844351 intron sick + chr2L_10_19840001 chr2L_19840001 RAL-853_125b 848 chr2L 19846241 19846274 chr2L 19846367 19846405 7 130 15.0 27.5 21.2 0.3 164 chr2L 19846241 intron sick + chr2L 19846323 intron sick + chr2L 19846405 intron sick + chr2L_7_19845001 chr2L_19845001 RAL-853_125b 849 chr2L 19878804 19878970 chr2L 19878931 19879229 8 226 24.0 16.5 20.2 0.4 425 chr2L 19878804 intron sick + chr2L 19879016 intron sick + chr2L 19879229 intron sick + chr2L_8_19875001 chr2L_19875001 RAL-853_125b 850 chr2L 19933282 19933306 chr2L 19933408 19933432 6 126 14.5 23.0 18.8 0.3 150 chr2L 19933282 intron sick + chr2L 19933357 intron sick + chr2L 19933432 intron sick + chr2L_6_19930001 chr2L_19930001 RAL-853_125b 851 chr2L 19935205 19935250 chr2L 19935331 19935377 8 126 16.0 15.0 15.5 0.5 172 chr2L 19935205 intron sick + chr2L 19935291 intron sick + chr2L 19935377 intron sick + chr2L_8_19935001 chr2L_19935001 RAL-853_125b 852 chr2L 19941460 19941522 chr2L 19941599 19941661 18 138 13.5 9.5 11.5 1.4 201 chr2L 19941460 intron sick + chr2L 19941560 intron sick + chr2L 19941661 intron sick + chr2L_18_19940001 chr2L_19940001 RAL-853_125b 853 chr2L 19950167 19950202 chr2L 19950294 19950334 18 132 7.0 10.5 8.8 1.8 167 chr2L 19950167 intron sick + chr2L 19950250 intron sick + chr2L 19950334 intron sick + chr2L_18_19950001 chr2L_19950001 RAL-853_125b 854 chr2L 19964794 19964860 chr2L 19964930 19964996 26 135 15.0 14.0 14.5 1.7 202 chr2L 19964794 intron CG10680 + chr2L 19964895 exon CG10680 + chr2L 19964996 exon CG10680 + chr2L_26_19960001 chr2L_19960001 RAL-853_125b 855 chr2L 19994617 19994681 chr2L 19994735 19994791 6 124 11.5 13.0 12.2 0.5 174 chr2L 19994617 intron CG43861 - chr2L 19994704 intron CG43861 - chr2L 19994791 intron CG43861 - chr2L_6_19990001 chr2L_19990001 RAL-853_125b 856 chr2L 20005838 20005894 chr2L 20010964 20011020 flea 20 5126 8.5 15.0 11.8 1.6 5182 chr2L 20005838 intron CG43861 - chr2L 20008429 intron CG43861 - chr2L 20011020 intron CG43861 - chr2L_20_20005001 chr2L_20005001 RAL-853_125b 857 chr2L 20022048 20022102 chr2L 20022211 20022265 14 163 10.0 14.0 12.0 1.1 217 chr2L 20022048 intergenic not near genes chr2L 20022156 intergenic not near genes chr2L 20022265 intergenic not near genes chr2L_14_20020001 chr2L_20020001 RAL-853_125b 858 chr2L 20034571 20034634 chr2L 20035842 20035894 6 1262 32.5 21.5 27.0 0.2 1323 chr2L 20034571 intron sNPF + chr2L 20035232 intron sNPF + chr2L 20035894 intron sNPF + chr2L_6_20035001 chr2L_20035001 RAL-853_125b 859 chr2L 20041383 20041455 chr2L 20041518 20041590 24 133 22.0 25.0 23.5 1.0 207 chr2L 20041383 intron sNPF + chr2L 20041486 intron sNPF + chr2L 20041590 intron sNPF + chr2L_24_20040001 chr2L_20040001 RAL-853_125b 860 chr2L 20057000 20057076 chr2L 20057128 20057203 23 124 6.0 5.5 5.8 3.4 203 chr2L 20057000 intergenic not near genes chr2L 20057102 intergenic not near genes chr2L 20057203 intergenic not near genes chr2L_23_20055001 chr2L_20055001 RAL-853_125b 861 chr2L 20078849 20078914 chr2L 20078976 20079041 15 125 31.5 33.5 32.5 0.4 192 chr2L 20078849 intron neb + chr2L 20078945 intron neb + chr2L 20079041 intron neb + chr2L_15_20075001 chr2L_20075001 RAL-853_125b 862 chr2L 20079827 20079901 chr2L 20080000 20080075 7 173 22.0 18.5 20.2 0.3 248 chr2L 20079827 intron,intron neb +,fok - chr2L 20079951 intron,intron neb +,fok - chr2L 20080075 intron,intron neb +,fok - chr2L_7_20075001 chr2L_20075001 RAL-853_125b 863 chr2L 20083798 20083864 chr2L 20083924 20083990 8 125 38.5 32.5 35.5 0.2 192 chr2L 20083798 intron,intron neb +,fok - chr2L 20083894 intron,intron neb +,fok - chr2L 20083990 intron,intron neb +,fok - chr2L_8_20080001 chr2L_20080001 RAL-853_125b 864 chr2L 20124285 20124350 chr2L 20124413 20124478 13 128 13.5 14.5 14.0 0.9 193 chr2L 20124285 intergenic not near genes chr2L 20124382 intergenic not near genes chr2L 20124478 intergenic not near genes chr2L_13_20120001 chr2L_20120001 RAL-853_125b 865 chr2L 20232339 20232392 chr2L 20232468 20232521 20 129 19.5 13.5 16.5 1.1 182 chr2L 20232339 intergenic not near genes chr2L 20232430 intergenic not near genes chr2L 20232521 intergenic not near genes chr2L_20_20230001 chr2L_20230001 RAL-853_125b 866 chr2L 20269560 20269630 chr2L 20269834 20269904 26 273 7.5 6.5 7.0 3.2 344 chr2L 20269560 intergenic not near genes chr2L 20269732 intergenic not near genes chr2L 20269904 intergenic not near genes chr2L_26_20265001 chr2L_20265001 RAL-853_125b 867 chr2L 20271217 20271266 chr2L 20271350 20271399 17 130 18.5 16.0 17.2 0.9 182 chr2L 20271217 intergenic not near genes chr2L 20271308 intergenic not near genes chr2L 20271399 intergenic not near genes chr2L_17_20270001 chr2L_20270001 RAL-853_125b 868 chr2L 20272079 20272135 chr2L 20282840 20282896 copia 31 10760 6.5 11.0 8.8 3.2 10817 chr2L 20272079 intergenic not near genes chr2L 20277488 intergenic not near genes chr2L 20282896 intergenic not near genes chr2L_31_20275001 chr2L_20275001 RAL-853_125b 869 chr2L 20296474 20296521 chr2L 20296605 20296646 10 130 1.0 3.5 2.2 3.1 172 chr2L 20296474 intergenic CR43414 - chr2L 20296560 intergenic CR43414 - chr2L 20296646 3` UTR CR43414 - chr2L_10_20295001 chr2L_20295001 RAL-853_125b 870 chr2L 20298787 20298854 chr2L 20298903 20298987 23 131 15.5 18.5 17.0 1.3 200 chr2L 20298787 intergenic not near genes chr2L 20298887 intergenic not near genes chr2L 20298987 intergenic not near genes chr2L_23_20295001 chr2L_20295001 RAL-853_125b 871 chr2L 20299971 20300019 chr2L 20300089 20300157 22 121 10.5 13.0 11.8 1.7 186 chr2L 20299971 intergenic not near genes chr2L 20300064 intergenic not near genes chr2L 20300157 intergenic not near genes chr2L_22_20300001 chr2L_20300001 RAL-853_125b 872 chr2L 20302947 20302968 chr2L 20303087 20303108 8 140 18.0 2.5 10.2 0.7 161 chr2L 20302947 intergenic not near genes chr2L 20303028 intergenic not near genes chr2L 20303108 intergenic not near genes chr2L_8_20300001 chr2L_20300001 RAL-853_125b 873 chr2L 20303163 20303182 chr2L 20310639 20310700 blood 8 7513 0.5 7.5 4.0 1.6 7537 chr2L 20303163 intergenic not near genes chr2L 20306932 intergenic not near genes chr2L 20310700 intergenic not near genes chr2L_8_20305001 chr2L_20305001 RAL-853_125b 874 chr2L 20310830 20310892 chr2L 20310960 20311022 19 130 8.0 8.0 8.0 2.1 192 chr2L 20310830 intergenic spir + chr2L 20310926 intergenic spir + chr2L 20311022 intergenic spir + chr2L_19_20310001 chr2L_20310001 RAL-853_125b 875 chr2L 20312529 20312560 chr2L 20312664 20312695 11 135 13.5 14.0 13.8 0.7 166 chr2L 20312529 intron spir + chr2L 20312612 intron spir + chr2L 20312695 intron spir + chr2L_11_20310001 chr2L_20310001 RAL-853_125b 876 chr2L 20321519 20321530 chr2L 20321631 20321651 5 114 13.5 15.0 14.2 0.3 132 chr2L 20321519 intron spir + chr2L 20321585 intron spir + chr2L 20321651 intron spir + chr2L_5_20320001 chr2L_20320001 RAL-853_125b 877 chr2L 20372192 20372247 chr2L 20372483 20372538 pogo 23 290 10.5 12.0 11.2 1.9 346 chr2L 20372192 intergenic Ugt37a1 - chr2L 20372365 intergenic Ugt37a1 - chr2L 20372538 exon Ugt37a1 - chr2L_23_20370001 chr2L_20370001 RAL-853_125b 878 chr2L 20376028 20376097 chr2L 20376197 20376221 23 165 14.5 14.5 14.5 1.5 193 chr2L 20376028 intergenic not near genes chr2L 20376124 intergenic not near genes chr2L 20376221 intergenic not near genes chr2L_23_20375001 chr2L_20375001 RAL-853_125b 879 chr2L 20383285 20383303 chr2L 20383418 20383436 5 133 30.0 34.5 32.2 0.2 151 chr2L 20383285 intergenic not near genes chr2L 20383360 intergenic not near genes chr2L 20383436 intergenic not near genes chr2L_5_20380001 chr2L_20380001 RAL-853_125b 880 chr2L 20392944 20392972 chr2L 20393086 20393114 4 142 14.5 18.5 16.5 0.2 170 chr2L 20392944 intron CG10947 - chr2L 20393029 intron CG10947 - chr2L 20393114 intron CG10947 - chr2L_4_20390001 chr2L_20390001 RAL-853_125b 881 chr2L 20396761 20396830 chr2L 20396887 20396956 10 126 28.0 28.0 28.0 0.3 195 chr2L 20396761 intron CG10947 - chr2L 20396858 intron CG10947 - chr2L 20396956 intron CG10947 - chr2L_10_20395001 chr2L_20395001 RAL-853_125b 882 chr2L 20400334 20400386 chr2L 20400503 20400555 6 169 26.5 31.0 28.8 0.2 221 chr2L 20400334 intron CG10947 - chr2L 20400444 intron CG10947 - chr2L 20400555 intron CG10947 - chr2L_6_20400001 chr2L_20400001 RAL-853_125b 883 chr2L 20498642 20498708 chr2L 20498791 20498857 31 149 7.5 10.0 8.8 3.2 215 chr2L 20498642 intergenic not near genes chr2L 20498750 intergenic not near genes chr2L 20498857 intergenic not near genes chr2L_31_20495001 chr2L_20495001 RAL-853_125b 884 chr2L 20513548 20513577 chr2L 20513690 20513719 9 142 11.0 7.5 9.2 0.9 171 chr2L 20513548 intergenic CR45702 + chr2L 20513634 intergenic CR45702 + chr2L 20513719 intergenic CR45702 + chr2L_9_20510001 chr2L_20510001 RAL-853_125b 885 chr2L 20521724 20521784 chr2L 20522307 20522367 15 584 34.5 35.5 35.0 0.4 643 chr2L 20521724 intergenic not near genes chr2L 20522046 intergenic not near genes chr2L 20522367 intergenic not near genes chr2L_15_20520001 chr2L_20520001 RAL-853_125b 886 chr2L 20552741 20552764 chr2L 20553030 20553053 10 289 17.5 16.0 16.8 0.6 312 chr2L 20552741 intergenic not near genes chr2L 20552897 intergenic not near genes chr2L 20553053 intergenic not near genes chr2L_10_20550001 chr2L_20550001 RAL-853_125b 887 chr2L 20552765 20552822 chr2L 20553029 20553088 15 280 17.0 16.5 16.8 0.8 323 chr2L 20552765 intergenic not near genes chr2L 20552926 intergenic not near genes chr2L 20553088 intergenic not near genes chr2L_15_20550001 chr2L_20550001 RAL-853_125b 888 chr2L 20568610 20568684 chr2L 20569050 20569124 X-element 31 440 6.0 9.0 7.5 3.6 514 chr2L 20568610 intron CR45347 + chr2L 20568867 intron CR45347 + chr2L 20569124 intron CR45347 + chr2L_31_20565001 chr2L_20565001 RAL-853_125b 889 chr2L 20576176 20576243 chr2L 20583694 20583761 blood 30 7518 4.0 5.5 4.8 5.2 7585 chr2L 20576176 intergenic CR45347 + chr2L 20579968 intergenic not near genes chr2L 20583761 3` UTR CR44909 - chr2L_30_20575001 chr2L_20575001 RAL-853_125b 890 chr2L 20597059 20597105 chr2L 20597169 20597232 16 123 14.5 15.5 15.0 1.0 173 chr2L 20597059 intron CR44909 - chr2L 20597146 intron CR44909 - chr2L 20597232 intron CR44909 - chr2L_16_20595001 chr2L_20595001 RAL-853_125b 891 chr2L 20602667 20602741 chr2L 20602805 20602878 5 135 10.5 11.0 10.8 0.4 211 chr2L 20602667 intron CR44909 - chr2L 20602772 intron CR44909 - chr2L 20602878 intron CR44909 - chr2L_5_20600001 chr2L_20600001 RAL-853_125b 892 chr2L 20611184 20611255 chr2L 20611326 20611355 7 127 11.5 13.0 12.2 0.5 171 chr2L 20611184 intron CR44909 - chr2L 20611270 intron CR44909 - chr2L 20611355 intron CR44909 - chr2L_7_20610001 chr2L_20610001 RAL-853_125b 893 chr2L 20623785 20623858 chr2L 20623914 20623931 26 120 16.0 16.0 16.0 1.5 146 chr2L 20623785 intron CR44909 - chr2L 20623858 intron CR44909 - chr2L 20623931 intron CR44909 - chr2L_26_20620001 chr2L_20620001 RAL-853_125b 894 chr2L 20674785 20674859 chr2L 20674920 20674986 12 129 5.5 6.0 5.8 1.8 201 chr2L 20674785 intron CG31678 - chr2L 20674886 intron CG31678 - chr2L 20674986 intron CG31678 - chr2L_12_20670001 chr2L_20670001 RAL-853_125b 895 chr2L 20715098 20715168 chr2L 20715385 20715455 18 286 22.0 14.0 18.0 0.9 357 chr2L 20715098 intergenic not near genes chr2L 20715276 intergenic not near genes chr2L 20715455 intergenic not near genes chr2L_18_20715001 chr2L_20715001 RAL-853_125b 896 chr2L 20724160 20724227 chr2L 20724298 20724365 23 137 18.5 22.0 20.2 1.1 205 chr2L 20724160 intergenic CG9316 - chr2L 20724262 3` UTR CG9316 - chr2L 20724365 3` UTR CG9316 - chr2L_23_20720001 chr2L_20720001 RAL-853_125b 897 chr2L 20795307 20795320 chr2L 20795446 20795459 4 144 3.0 14.0 8.5 0.4 152 chr2L 20795307 intron vari - chr2L 20795383 intron vari - chr2L 20795459 intron vari - chr2L_4_20795001 chr2L_20795001 RAL-853_125b 898 chr2L 20804680 20804727 chr2L 20804815 20804857 8 134 21.5 25.5 23.5 0.3 177 chr2L 20804680 intron CG9328 + chr2L 20804768 intron CG9328 + chr2L 20804857 intron CG9328 + chr2L_8_20800001 chr2L_20800001 RAL-853_125b 899 chr2L 20814829 20814904 chr2L 20817476 20817551 28 2648 63.5 55.0 59.2 0.5 2722 chr2L 20814829 exon CG33322 - chr2L 20816190 5` UTR CG33322 - chr2L 20817551 intergenic CheB38a -,CheB38b - chr2L_28_20815001 chr2L_20815001 RAL-853_125b 900 chr2L 20819077 20819101 chr2L 20819211 20819233 7 134 15.0 9.0 12.0 0.5 156 chr2L 20819077 intergenic not near genes chr2L 20819155 intergenic not near genes chr2L 20819233 intergenic not near genes chr2L_7_20815001 chr2L_20815001 RAL-853_125b 901 chr2L 20819112 20819137 chr2L 20819204 20819265 9 128 11.0 8.0 9.5 0.9 153 chr2L 20819112 intergenic not near genes chr2L 20819188 intergenic not near genes chr2L 20819265 intergenic not near genes chr2L_9_20815001 chr2L_20815001 RAL-853_125b 902 chr2L 20821456 20821520 chr2L 20821654 20821718 22 196 27.5 20.5 24.0 0.9 262 chr2L 20821456 intergenic not near genes chr2L 20821587 intergenic not near genes chr2L 20821718 intergenic not near genes chr2L_22_20820001 chr2L_20820001 RAL-853_125b 903 chr2L 20835761 20835834 chr2L 20836528 20836601 Quasimodo 15 766 6.0 5.5 5.8 2.2 840 chr2L 20835761 5` UTR Oseg5 - chr2L 20836181 intergenic Oseg5 -,Spn38F - chr2L 20836601 intergenic Spn38F - chr2L_15_20835001 chr2L_20835001 RAL-853_125b 904 chr2L 20862582 20862593 chr2L 20862729 20862740 5 147 0.0 9.0 4.5 0.9 158 chr2L 20862582 intergenic not near genes chr2L 20862661 intergenic not near genes chr2L 20862740 intergenic not near genes chr2L_5_20860001 chr2L_20860001 RAL-853_125b 905 chr2L 20891485 20891543 chr2L 20896636 20896694 jockey 20 5151 6.0 8.0 7.0 2.5 5209 chr2L 20891485 intron,intron CG43739 -,sky - chr2L 20894090 intron,intron CG43739 -,sky - chr2L 20896694 intron,intron CG43739 -,sky - chr2L_20_20890001 chr2L_20890001 RAL-853_125b 906 chr2L 20901471 20901490 chr2L 20902685 20902706 1360 4 1215 0.0 16.5 8.2 0.4 1235 chr2L 20901471 intron,intron CG43739 -,sky - chr2L 20902088 intron,intron CG43739 -,sky - chr2L 20902706 intron,intron CG43739 -,sky - chr2L_4_20900001 chr2L_20900001 RAL-853_125b 907 chr2L 20934554 20934627 chr2L 20934799 20934872 26 245 11.5 11.5 11.5 2.1 318 chr2L 20934554 intergenic CG9270 - chr2L 20934713 intergenic not near genes chr2L 20934872 intergenic not near genes chr2L_26_20930001 chr2L_20930001 RAL-853_125b 908 chr2L 20967048 20967107 chr2L 20967180 20967243 16 136 10.5 11.5 11.0 1.3 195 chr2L 20967048 3` UTR CG42238 - chr2L 20967146 3` UTR CG42238 - chr2L 20967243 3` UTR CG42238 - chr2L_16_20965001 chr2L_20965001 RAL-853_125b 909 chr2L 20967887 20967950 chr2L 20968030 20968073 7 140 33.0 34.5 33.8 0.2 186 chr2L 20967887 intron CG42238 - chr2L 20967980 intron CG42238 - chr2L 20968073 intron CG42238 - chr2L_7_20965001 chr2L_20965001 RAL-853_125b 910 chr2L 20976607 20976659 chr2L 20981472 20981520 X-element 24 4865 9.0 11.0 10.0 2.2 4913 chr2L 20976607 intron CG42238 - chr2L 20979064 intron CG42238 - chr2L 20981520 intron CG42238 - chr2L_24_20975001 chr2L_20975001 RAL-853_125b 911 chr2L 21020235 21020253 chr2L 21023962 21023980 NOF 4 3727 17.0 9.5 13.2 0.3 3745 chr2L 21020235 intron CG42238 - chr2L 21022108 intron CG42238 - chr2L 21023980 intron CG42238 - chr2L_4_21020001 chr2L_21020001 RAL-853_125b 912 chr2L 21020258 21020296 chr2L 21023950 21024023 NOF 16 3717 11.5 7.5 9.5 1.5 3765 chr2L 21020258 intron CG42238 - chr2L 21022140 intron CG42238 - chr2L 21024023 intron CG42238 - chr2L_16_21020001 chr2L_21020001 RAL-853_125b 913 chr2L 21041093 21041157 chr2L 21049404 21049468 Tirant 21 8310 10.0 10.0 10.0 1.9 8375 chr2L 21041093 intron CG42238 - chr2L 21045280 intron CG42238 - chr2L 21049468 intron CG42238 - chr2L_21_21045001 chr2L_21045001 RAL-853_125b 914 chr2L 21074877 21074937 chr2L 21075018 21075078 9 141 6.0 6.5 6.2 1.2 201 chr2L 21074877 intergenic not near genes chr2L 21074978 intergenic tadr + chr2L 21075078 intergenic tadr + chr2L_9_21070001 chr2L_21070001 RAL-853_125b 915 chr2L 21119246 21119310 chr2L 21119380 21119444 7 134 38.0 34.0 36.0 0.2 198 chr2L 21119246 intron Nhe2 + chr2L 21119345 intron Nhe2 + chr2L 21119444 intron Nhe2 + chr2L_7_21115001 chr2L_21115001 RAL-853_125b 916 chr2L 21196135 21196181 chr2L 21196311 21196357 8 175 26.0 33.0 29.5 0.3 222 chr2L 21196135 intron Ret - chr2L 21196246 intron Ret - chr2L 21196357 intron Ret - chr2L_8_21195001 chr2L_21195001 RAL-853_125b 917 chr2L 21284007 21284073 chr2L 21284530 21284596 11 523 31.5 19.5 25.5 0.4 589 chr2L 21284007 intergenic not near genes chr2L 21284302 intergenic not near genes chr2L 21284596 intergenic not near genes chr2L_11_21280001 chr2L_21280001 RAL-853_125b 918 chr2L 21285605 21285639 chr2L 21285753 21285787 6 148 34.5 26.5 30.5 0.2 182 chr2L 21285605 intergenic Mio - chr2L 21285696 intergenic Mio - chr2L 21285787 intergenic Mio - chr2L_6_21285001 chr2L_21285001 RAL-853_125b 919 chr2L 21286563 21286624 chr2L 21286691 21286753 6 128 22.5 21.5 22.0 0.3 190 chr2L 21286563 exon Mio - chr2L 21286658 intron Mio - chr2L 21286753 intron Mio - chr2L_6_21285001 chr2L_21285001 RAL-853_125b 920 chr2L 21307427 21307499 chr2L 21307559 21307631 13 130 24.0 25.5 24.8 0.5 204 chr2L 21307427 intron Mio - chr2L 21307529 intron Mio - chr2L 21307631 intron Mio - chr2L_13_21305001 chr2L_21305001 RAL-853_125b 921 chr2L 21347508 21347566 chr2L 21355030 21355088 blood 18 7522 7.5 3.5 5.5 2.8 7580 chr2L 21347508 intron Tsp39D + chr2L 21351298 intron Tsp39D + chr2L 21355088 intron Tsp39D + chr2L_18_21350001 chr2L_21350001 RAL-853_125b 922 chr2L 21381186 21381229 chr2L 21381322 21381343 5 139 25.0 31.0 28.0 0.2 157 chr2L 21381186 intron nrv3 + chr2L 21381264 intron nrv3 + chr2L 21381343 intron nrv3 + chr2L_5_21380001 chr2L_21380001 RAL-853_125b 923 chr2L 21396590 21396610 chr2L 21396875 21396895 4 285 14.0 23.5 18.8 0.2 305 chr2L 21396590 intergenic not near genes chr2L 21396742 intergenic not near genes chr2L 21396895 intergenic not near genes chr2L_4_21395001 chr2L_21395001 RAL-853_125b 924 chr2L 21596989 21597057 chr2L 21604783 21604851 roo 12 7793 6.0 6.5 6.2 1.7 7862 chr2L 21596989 intergenic not near genes chr2L 21600920 intergenic not near genes chr2L 21604851 intergenic not near genes chr2L_12_21600001 chr2L_21600001 RAL-853_125b 925 chr2L 21667470 21667530 chr2L 21667726 21667786 9 256 20.0 26.0 23.0 0.4 316 chr2L 21667470 intron CG2225 - chr2L 21667628 intron CG2225 - chr2L 21667786 intron CG2225 - chr2L_9_21665001 chr2L_21665001 RAL-853_125b 926 chr2L 21691795 21691841 chr2L 21698315 21698362 Burdock 11 6520 8.5 1.5 5.0 1.8 6567 chr2L 21691795 intron CG31619 + chr2L 21695078 intron CG31619 + chr2L 21698362 intron CG31619 + chr2L_11_21695001 chr2L_21695001 RAL-853_125b 927 chr2L 21751099 21751161 chr2L 21751904 21751961 INE-1 10 804 11.0 16.5 13.8 0.7 862 chr2L 21751099 intron step - chr2L 21751530 intron step - chr2L 21751961 intron step - chr2L_10_21750001 chr2L_21750001 RAL-853_125b 928 chr2L 21754623 21754679 chr2L 21754754 21754810 16 131 15.0 12.5 13.8 1.1 187 chr2L 21754623 intron step - chr2L 21754716 intron step - chr2L 21754810 intron step - chr2L_16_21750001 chr2L_21750001 RAL-853_125b 929 chr2L 21755450 21755521 chr2L 21755624 21755695 20 173 16.0 16.5 16.2 1.2 245 chr2L 21755450 intron step - chr2L 21755572 intron step - chr2L 21755695 intron step - chr2L_20_21755001 chr2L_21755001 RAL-853_125b 930 chr2L 21757532 21757595 chr2L 21757663 21757726 13 131 16.0 15.0 15.5 0.8 194 chr2L 21757532 intergenic step -,CG1416 + chr2L 21757629 intergenic step -,CG1416 + chr2L 21757726 intergenic step -,CG1416 + chr2L_13_21755001 chr2L_21755001 RAL-853_125b 931 chr2L 21771940 21771980 chr2L 21772069 21772109 5 129 25.5 30.0 27.8 0.2 169 chr2L 21771940 intron CG31612 - chr2L 21772024 intron CG31612 - chr2L 21772109 intron CG31612 - chr2L_5_21770001 chr2L_21770001 RAL-853_125b 932 chr2L 21781838 21781882 chr2L 21781957 21782021 10 137 13.0 13.0 13.0 0.7 183 chr2L 21781838 intron CG31612 - chr2L 21781930 intron CG31612 - chr2L 21782021 intron CG31612 - chr2L_10_21780001 chr2L_21780001 RAL-853_125b 933 chr2L 21806186 21806254 chr2L 21806339 21806407 9 153 11.5 13.5 12.5 0.7 221 chr2L 21806186 intergenic not near genes chr2L 21806296 intergenic not near genes chr2L 21806407 intergenic not near genes chr2L_9_21805001 chr2L_21805001 RAL-853_125b 934 chr2L 21808975 21809033 chr2L 21809231 21809258 15 254 13.5 15.0 14.2 1.0 283 chr2L 21808975 intergenic not near genes chr2L 21809116 intergenic not near genes chr2L 21809258 intergenic not near genes chr2L_15_21805001 chr2L_21805001 RAL-853_125b 935 chr2L 21819281 21819348 chr2L 21819419 21819485 11 136 26.0 29.5 27.8 0.4 204 chr2L 21819281 intergenic CR44786 + chr2L 21819383 intergenic CR44786 + chr2L 21819485 intergenic CR44786 + chr2L_11_21815001 chr2L_21815001 RAL-853_125b 936 chr2L 21824099 21824134 chr2L 21824236 21824271 4 137 11.5 22.5 17.0 0.2 172 chr2L 21824099 intergenic not near genes chr2L 21824185 intergenic not near genes chr2L 21824271 intergenic not near genes chr2L_4_21820001 chr2L_21820001 RAL-853_125b 937 chr2L 21882558 21882581 chr2L 21882705 21882728 5 147 17.5 14.0 15.8 0.3 170 chr2L 21882558 intergenic not near genes chr2L 21882643 intergenic not near genes chr2L 21882728 intergenic not near genes chr2L_5_21880001 chr2L_21880001 RAL-853_125b 938 chr2L 21901374 21901426 chr2L 21901502 21901554 5 128 22.0 19.5 20.8 0.2 180 chr2L 21901374 intergenic not near genes chr2L 21901464 intergenic not near genes chr2L 21901554 intergenic not near genes chr2L_5_21900001 chr2L_21900001 RAL-853_125b 939 chr2L 21933901 21933920 chr2L 21934004 21934007 4 111 8.0 12.0 10.0 0.4 106 chr2L 21933901 intergenic not near genes chr2L 21933954 intergenic not near genes chr2L 21934007 intergenic not near genes chr2L_4_21930001 chr2L_21930001 RAL-853_125b 940 chr2L 21981644 21981715 chr2L 21990859 21990871 roo 29 9210 10.0 10.0 10.0 2.6 9227 chr2L 21981644 exon CG2528 - chr2L 21986258 intron CG2528 - chr2L 21990871 exon CG2528 - chr2L_29_21985001 chr2L_21985001 RAL-853_125b 941 chr2L 22047204 22047257 chr2L 22047379 22047432 20 174 5.5 11.0 8.2 2.2 228 chr2L 22047204 intergenic not near genes chr2L 22047318 intergenic not near genes chr2L 22047432 intergenic not near genes chr2L_20_22045001 chr2L_22045001 RAL-853_125b 942 chr2L 22054825 22054886 chr2L 22055233 22055294 7 408 22.0 22.0 22.0 0.3 469 chr2L 22054825 intergenic not near genes chr2L 22055060 intergenic not near genes chr2L 22055294 intergenic not near genes chr2L_7_22055001 chr2L_22055001 RAL-853_125b 943 chr2L 22073016 22073023 chr2L 22073151 22073158 INE-1 4 135 19.0 2.5 10.8 0.3 142 chr2L 22073016 intergenic CG31702 + chr2L 22073087 intergenic CG31702 + chr2L 22073158 intergenic CG31702 + chr2L_4_22070001 chr2L_22070001 RAL-853_125b 944 chr2L 22097057 22097120 chr2L 22097200 22097263 13 143 7.0 9.0 8.0 1.4 206 chr2L 22097057 intergenic not near genes chr2L 22097160 intergenic not near genes chr2L 22097263 intergenic not near genes chr2L_13_22095001 chr2L_22095001 RAL-853_125b 945 chr2L 22165463 22165520 chr2L 22165594 22165651 11 131 12.5 11.0 11.8 0.9 188 chr2L 22165463 3` UTR CG42748 + chr2L 22165557 3` UTR CG42748 + chr2L 22165651 3` UTR CG42748 + chr2L_11_22165001 chr2L_22165001 RAL-853_125b 946 chr2L 22179492 22179564 chr2L 22179619 22179691 20 126 18.0 15.0 16.5 1.1 199 chr2L 22179492 intron CG3635 + chr2L 22179592 intron CG3635 + chr2L 22179691 intron CG3635 + chr2L_20_22175001 chr2L_22175001 RAL-853_125b 947 chr2L 22191999 22192047 chr2L 22192138 22192186 9 138 26.0 21.5 23.8 0.4 187 chr2L 22191999 intron Ir40a - chr2L 22192092 intron Ir40a - chr2L 22192186 intron Ir40a - chr2L_9_22190001 chr2L_22190001 RAL-853_125b 948 chr2L 22215867 22215906 chr2L 22216003 22216042 6 136 23.0 21.0 22.0 0.3 175 chr2L 22215867 intergenic not near genes chr2L 22215954 intergenic not near genes chr2L 22216042 intergenic not near genes chr2L_6_22215001 chr2L_22215001 RAL-853_125b 949 chr2L 22245882 22245888 chr2L 22329196 22329202 gypsy4 5 83314 33.5 23.0 28.2 0.2 83320 chr2L 22245882 3` UTR CG3262 + chr2L 22287542 intergenic not near genes chr2L 22329202 intron CG17018 + chr2L_5_22285001 chr2L_22285001 RAL-853_125b 950 chr2L 22256801 22256861 chr2L 22256940 22257000 14 138 11.5 17.5 14.5 0.9 199 chr2L 22256801 intron Tif-IA + chr2L 22256900 intron Tif-IA + chr2L 22257000 intron Tif-IA + chr2L_14_22255001 chr2L_22255001 RAL-853_125b 951 chr2L 22258586 22258636 chr2L 22260759 22260810 G6 7 2172 10.5 40.5 25.5 0.3 2224 chr2L 22258586 intergenic Tif-IA + chr2L 22259698 intergenic not near genes chr2L 22260810 intergenic not near genes chr2L_7_22255001 chr2L_22255001 RAL-853_125b 952 chr2L 22294306 22294376 chr2L 22294444 22294514 13 138 6.0 2.5 4.2 2.5 208 chr2L 22294306 intergenic not near genes chr2L 22294410 intergenic not near genes chr2L 22294514 intergenic not near genes chr2L_13_22290001 chr2L_22290001 RAL-853_125b 953 chr2L 22296871 22296915 chr2L 22297047 22297092 9 177 8.0 9.0 8.5 0.9 221 chr2L 22296871 intergenic not near genes chr2L 22296982 intergenic not near genes chr2L 22297092 intergenic not near genes chr2L_9_22295001 chr2L_22295001 RAL-853_125b 954 chr2L 22357011 22357077 chr2L 22357207 22357253 14 192 22.0 20.5 21.2 0.6 242 chr2L 22357011 5` UTR CG17018 + chr2L 22357132 intron CG17018 + chr2L 22357253 intron CG17018 + chr2L_14_22355001 chr2L_22355001 RAL-853_125b 955 chr2L 22548886 22548936 chr2L 22550134 22550174 1360 13 1255 0.0 7.5 3.8 2.7 1288 chr2L 22548886 intergenic CG17490 + chr2L 22549530 intergenic not near genes chr2L 22550174 intergenic CG17493 + chr2L_13_22545001 chr2L_22545001 RAL-853_125b 956 chr2L 22558345 22558410 chr2L 22558706 22558763 10 360 28.5 27.0 27.8 0.3 418 chr2L 22558345 intergenic not near genes chr2L 22558554 intergenic not near genes chr2L 22558763 intergenic not near genes chr2L_10_22555001 chr2L_22555001 RAL-853_125b 957 chr2L 22581923 22582000 chr2L 22583762 22583858 S-element 21 1841 6.5 7.5 7.0 2.6 1935 chr2L 22581923 intron CG17494 + chr2L 22582890 intron CG17494 + chr2L 22583858 intron CG17494 + chr2L_21_22580001 chr2L_22580001 RAL-853_125b 958 chr2L 22706765 22706806 chr2L 22706918 22706959 8 153 16.0 11.0 13.5 0.6 194 chr2L 22706765 intron CG40006 - chr2L 22706862 intron CG40006 - chr2L 22706959 intron CG40006 - chr2L_8_22705001 chr2L_22705001 RAL-853_125b 959 chr2L 22776376 22776439 chr2L 22778215 22778278 S-element 22 1839 8.5 6.0 7.2 2.7 1902 chr2L 22776376 intergenic not near genes chr2L 22777327 intergenic not near genes chr2L 22778278 intergenic not near genes chr2L_22_22775001 chr2L_22775001 RAL-853_125b 960 chr2L 22985570 22985621 chr2L 22985727 22985778 5 157 20.5 28.0 24.2 0.2 208 chr2L 22985570 intron cta + chr2L 22985674 intron cta + chr2L 22985778 intron cta + chr2L_5_22985001 chr2L_22985001 RAL-853_125b 961 chr2R 529315 529337 chr2R 537986 538012 Max-element 11 8674 8.0 10.0 9.0 1.1 8697 chr2R 529315 intron CG40378 + chr2R 533664 intron CG40378 + chr2R 538012 intron CG40378 + chr2R_11_530001 chr2R_530001 RAL-853_125b 962 chr2R 552713 552778 chr2R 553981 554033 1360 4 1260 11.5 17.0 14.2 0.3 1320 chr2R 552713 intron CG40378 + chr2R 553373 intron CG40378 + chr2R 554033 intron CG40378 + chr2R_4_550001 chr2R_550001 RAL-853_125b 963 chr2R 978311 978324 chr2R 978471 978506 5 164 17.0 24.5 20.8 0.2 195 chr2R 978311 intergenic not near genes chr2R 978408 intergenic not near genes chr2R 978506 intergenic not near genes chr2R_5_975001 chr2R_975001 RAL-853_125b 964 chr2R 1338329 1338340 chr2R 1338460 1338471 4 131 38.5 42.0 40.2 0.1 142 chr2R 1338329 intergenic not near genes chr2R 1338400 intergenic not near genes chr2R 1338471 intergenic not near genes chr2R_4_1335001 chr2R_1335001 RAL-853_125b 965 chr2R 1365820 1365884 chr2R 1365982 1366045 11 160 28.5 26.5 27.5 0.4 225 chr2R 1365820 intron l(2)41Ab + chr2R 1365932 intron l(2)41Ab + chr2R 1366045 intron l(2)41Ab + chr2R_11_1365001 chr2R_1365001 RAL-853_125b 966 chr2R 1516560 1516603 chr2R 1521338 1521381 1731 39 4778 50.5 43.5 47.0 0.8 4821 chr2R 1516560 exon Maf1 - chr2R 1518970 intron Maf1 - chr2R 1521381 5` UTR Maf1 - chr2R_39_1515001 chr2R_1515001 RAL-853_125b 967 chr2R 2015111 2015154 chr2R 2015238 2015281 5 127 16.0 16.5 16.2 0.3 170 chr2R 2015111 intron CG17684 - chr2R 2015196 intron CG17684 - chr2R 2015281 intron CG17684 - chr2R_5_2015001 chr2R_2015001 RAL-853_125b 968 chr2R 2498942 2499006 chr2R 2508139 2508203 roo 19 9197 8.5 5.5 7.0 2.4 9261 chr2R 2498942 intron MFS17 - chr2R 2503572 intron MFS17 - chr2R 2508203 intron MFS17 - chr2R_19_2500001 chr2R_2500001 RAL-853_125b 969 chr2R 2591493 2591509 chr2R 2594219 2594234 roo 6 2725 45.0 25.0 35.0 0.2 2741 chr2R 2591493 intergenic not near genes chr2R 2592864 intergenic not near genes chr2R 2594234 intergenic not near genes chr2R_6_2590001 chr2R_2590001 RAL-853_125b 970 chr2R 2688954 2688958 chr2R 4571022 4571026 aurora-element 4 1882068 20.0 14.0 17.0 0.2 1882072 chr2R 2688954 intergenic not near genes chr2R 3629990 intergenic not near genes chr2R 4571026 intergenic not near genes chr2R_4_3625001 chr2R_3625001 RAL-853_125b 971 chr2R 2875364 2875387 chr2R 2878925 2878952 HMS-Beagle 6 3564 25.5 23.5 24.5 0.2 3588 chr2R 2875364 intergenic not near genes chr2R 2877158 intergenic not near genes chr2R 2878952 intergenic not near genes chr2R_6_2875001 chr2R_2875001 RAL-853_125b 972 chr2R 3144039 3144106 chr2R 3393366 3393434 Doc 14 249328 25.5 20.5 23.0 0.6 249395 chr2R 3144039 intron CG42596 + chr2R 3268736 intergenic not near genes chr2R 3393434 intergenic not near genes chr2R_14_3265001 chr2R_3265001 RAL-853_125b 973 chr2R 3290460 3290462 chr2R 3290603 3290605 4 143 25.0 28.0 26.5 0.1 145 chr2R 3290460 intergenic not near genes chr2R 3290532 intergenic not near genes chr2R 3290605 intergenic not near genes chr2R_4_3290001 chr2R_3290001 RAL-853_125b 974 chr2R 3291953 3292103 chr2R 3915172 3915308 5 623210 18.0 42.0 30.0 0.2 623355 chr2R 3291953 intergenic not near genes chr2R 3603630 intergenic not near genes chr2R 3915308 intron uex - chr2R_5_3600001 chr2R_3600001 RAL-853_125b 975 chr2R 3532575 3532626 chr2R 3536068 3536119 Doc 8 3493 3.5 2.0 2.8 2.1 3544 chr2R 3532575 intergenic not near genes chr2R 3534347 intergenic not near genes chr2R 3536119 intergenic not near genes chr2R_8_3530001 chr2R_3530001 RAL-853_125b 976 chr2R 4312916 4312980 chr2R 4313050 4313114 34 133 7.5 11.5 9.5 3.2 198 chr2R 4312916 intergenic not near genes chr2R 4313015 intergenic not near genes chr2R 4313114 intergenic not near genes chr2R_34_4310001 chr2R_4310001 RAL-853_125b 977 chr2R 4602802 4602858 chr2R 4603207 4603262 11 403 36.5 44.5 40.5 0.3 460 chr2R 4602802 intron p120ctn + chr2R 4603032 intron p120ctn + chr2R 4603262 intron p120ctn + chr2R_11_4600001 chr2R_4600001 RAL-853_125b 978 chr2R 4603302 4603365 chr2R 4603435 4603487 32 128 8.0 9.0 8.5 3.4 185 chr2R 4603302 intron p120ctn + chr2R 4603394 intron p120ctn + chr2R 4603487 intron p120ctn + chr2R_32_4600001 chr2R_4600001 RAL-853_125b 979 chr2R 4621272 4621342 chr2R 4621856 4621932 19 589 15.5 18.0 16.8 1.1 660 chr2R 4621272 3` UTR CR44101 - chr2R 4621602 3` UTR CR44101 - chr2R 4621932 3` UTR CR44101 - chr2R_19_4620001 chr2R_4620001 RAL-853_125b 980 chr2R 4622914 4622978 chr2R 4624118 4624187 1360 32 1207 7.0 7.5 7.2 3.9 1273 chr2R 4622914 intergenic CR44101 - chr2R 4623550 intergenic not near genes chr2R 4624187 intergenic not near genes chr2R_32_4620001 chr2R_4620001 RAL-853_125b 981 chr2R 4624601 4624664 chr2R 4626556 4626619 Bica 24 1954 6.0 9.5 7.8 2.7 2018 chr2R 4624601 intergenic not near genes chr2R 4625610 intergenic not near genes chr2R 4626619 intergenic not near genes chr2R_24_4625001 chr2R_4625001 RAL-853_125b 982 chr2R 4634159 4634176 chr2R 4634288 4634305 5 129 28.5 37.5 33.0 0.1 146 chr2R 4634159 intergenic not near genes chr2R 4634232 intergenic not near genes chr2R 4634305 intergenic not near genes chr2R_5_4630001 chr2R_4630001 RAL-853_125b 983 chr2R 4781674 4781745 chr2R 4781839 4781908 20 165 11.0 16.5 13.8 1.4 234 chr2R 4781674 intergenic not near genes chr2R 4781791 intergenic not near genes chr2R 4781908 intergenic not near genes chr2R_20_4780001 chr2R_4780001 RAL-853_125b 984 chr2R 4783376 4783444 chr2R 4783504 4783572 18 126 16.0 20.5 18.2 0.9 196 chr2R 4783376 intergenic not near genes chr2R 4783474 intergenic not near genes chr2R 4783572 intergenic not near genes chr2R_18_4780001 chr2R_4780001 RAL-853_125b 985 chr2R 4821171 4821239 chr2R 4821307 4821375 23 135 3.5 3.5 3.5 5.1 204 chr2R 4821171 intron CG17528 - chr2R 4821273 intron CG17528 - chr2R 4821375 intron CG17528 - chr2R_23_4820001 chr2R_4820001 RAL-853_125b 986 chr2R 4830102 4830113 chr2R 5636388 5636399 rooA 5 806286 34.0 43.5 38.8 0.1 806297 chr2R 4830102 3` UTR CG14464 + chr2R 5233250 intron Nipped-A - chr2R 5636399 intergenic not near genes chr2R_5_5230001 chr2R_5230001 RAL-853_125b 987 chr2R 4838833 4838843 chr2R 4840406 4840411 transib2 6 1572 27.5 13.5 20.5 0.3 1578 chr2R 4838833 intergenic not near genes chr2R 4839622 intergenic not near genes chr2R 4840411 intergenic not near genes chr2R_6_4835001 chr2R_4835001 RAL-853_125b 988 chr2R 4838858 4838896 chr2R 4840400 4840469 transib2 26 1571 13.5 11.0 12.2 2.0 1611 chr2R 4838858 intergenic not near genes chr2R 4839664 intergenic not near genes chr2R 4840469 intergenic not near genes chr2R_26_4835001 chr2R_4835001 RAL-853_125b 989 chr2R 4870695 4870740 chr2R 4871256 4871301 R1A1-element 11 560 7.5 11.5 9.5 1.0 606 chr2R 4870695 intergenic not near genes chr2R 4870998 intergenic not near genes chr2R 4871301 intergenic not near genes chr2R_11_4870001 chr2R_4870001 RAL-853_125b 990 chr2R 4878636 4878704 chr2R 4887672 4887740 X-element 7 9034 37.0 23.5 30.2 0.2 9104 chr2R 4878636 intergenic not near genes chr2R 4883188 intergenic not near genes chr2R 4887740 intergenic not near genes chr2R_7_4880001 chr2R_4880001 RAL-853_125b 991 chr2R 4908883 4908928 chr2R 4909003 4909066 18 136 19.5 16.0 17.8 1.0 183 chr2R 4908883 intergenic not near genes chr2R 4908974 intergenic not near genes chr2R 4909066 intergenic not near genes chr2R_18_4905001 chr2R_4905001 RAL-853_125b 992 chr2R 4955000 4955066 chr2R 4955401 4955470 10 403 18.0 10.0 14.0 0.7 470 chr2R 4955000 intron Ir41a + chr2R 4955235 intron Ir41a + chr2R 4955470 intron Ir41a + chr2R_10_4955001 chr2R_4955001 RAL-853_125b 993 chr2R 4956977 4957046 chr2R 4957130 4957199 18 153 12.0 12.5 12.2 1.4 222 chr2R 4956977 intron Ir41a + chr2R 4957088 intron Ir41a + chr2R 4957199 intron Ir41a + chr2R_18_4955001 chr2R_4955001 RAL-853_125b 994 chr2R 5009172 5009196 chr2R 5009265 5009277 4 102 27.0 23.5 25.2 0.2 105 chr2R 5009172 intron Ir41a + chr2R 5009224 intron Ir41a + chr2R 5009277 intron Ir41a + chr2R_4_5005001 chr2R_5005001 RAL-853_125b 995 chr2R 5075219 5075359 chr2R 5075760 5075825 10 511 25.5 25.5 25.5 0.4 606 chr2R 5075219 intergenic not near genes chr2R 5075522 intergenic not near genes chr2R 5075825 intergenic not near genes chr2R_10_5075001 chr2R_5075001 RAL-853_125b 996 chr2R 5102999 5103064 chr2R 5103131 5103196 14 125 16.5 16.5 16.5 0.8 197 chr2R 5102999 intergenic not near genes chr2R 5103098 intergenic not near genes chr2R 5103196 intergenic not near genes chr2R_14_5100001 chr2R_5100001 RAL-853_125b 997 chr2R 5109978 5110000 chr2R 5110652 5110674 7 674 14.0 24.5 19.2 0.3 696 chr2R 5109978 intergenic not near genes chr2R 5110326 intergenic not near genes chr2R 5110674 intergenic not near genes chr2R_7_5110001 chr2R_5110001 RAL-853_125b 998 chr2R 5144890 5144906 chr2R 5145016 5145032 4 126 17.0 14.5 15.8 0.2 142 chr2R 5144890 intron Atf6 + chr2R 5144961 intron Atf6 + chr2R 5145032 intron Atf6 + chr2R_4_5140001 chr2R_5140001 RAL-853_125b 999 chr2R 5192692 5192718 chr2R 5192819 5192845 8 127 11.5 12.0 11.8 0.6 153 chr2R 5192692 intron Nipped-A - chr2R 5192768 intron Nipped-A - chr2R 5192845 intron Nipped-A - chr2R_8_5190001 chr2R_5190001 RAL-853_125b 1000 chr2R 5209748 5209807 chr2R 5210331 5210390 18 583 11.5 18.0 14.8 1.1 642 chr2R 5209748 intron Nipped-A - chr2R 5210069 intron Nipped-A - chr2R 5210390 intron Nipped-A - chr2R_18_5210001 chr2R_5210001 RAL-853_125b 1001 chr2R 5266087 5266138 chr2R 5266214 5266271 10 130 17.0 27.5 22.2 0.4 184 chr2R 5266087 intron d4 + chr2R 5266179 intron d4 + chr2R 5266271 intron d4 + chr2R_10_5265001 chr2R_5265001 RAL-853_125b 1002 chr2R 5415385 5415467 chr2R 5415518 5415594 15 130 1.0 4.0 2.5 4.3 209 chr2R 5415385 intron laccase2 + chr2R 5415490 intron laccase2 + chr2R 5415594 intron laccase2 + chr2R_15_5415001 chr2R_5415001 RAL-853_125b 1003 chr2R 5417949 5418013 chr2R 5420631 5420690 Burdock 28 2681 8.5 7.5 8.0 3.1 2741 chr2R 5417949 intron laccase2 + chr2R 5419320 intron laccase2 + chr2R 5420690 intron laccase2 + chr2R_28_5415001 chr2R_5415001 RAL-853_125b 1004 chr2R 5472325 5472394 chr2R 5472469 5472538 25 141 12.5 11.5 12.0 1.9 213 chr2R 5472325 intron CG30440 - chr2R 5472432 intron CG30440 - chr2R 5472538 intron CG30440 - chr2R_25_5470001 chr2R_5470001 RAL-853_125b 1005 chr2R 5543197 5543213 chr2R 5547331 5547347 invader1 9 4134 0.0 10.5 5.2 1.5 4150 chr2R 5543197 intron CG30438 + chr2R 5545272 intron CG30438 + chr2R 5547347 intron CG30438 + chr2R_9_5545001 chr2R_5545001 RAL-853_125b 1006 chr2R 5581397 5581414 chr2R 5627656 5627673 10 46257 12.5 27.0 19.8 0.5 46276 chr2R 5581397 intergenic not near genes chr2R 5604535 intron Fis1 - chr2R 5627673 intergenic not near genes chr2R_10_5600001 chr2R_5600001 RAL-853_125b 1007 chr2R 5611771 5611827 chr2R 5611908 5611954 20 145 10.0 12.5 11.2 1.6 183 chr2R 5611771 intergenic CG17508 + chr2R 5611862 intergenic CG17508 + chr2R 5611954 intergenic CG17508 + chr2R_20_5610001 chr2R_5610001 RAL-853_125b 1008 chr2R 5693451 5693516 chr2R 5693590 5693655 28 138 10.0 10.0 10.0 2.5 204 chr2R 5693451 intergenic not near genes chr2R 5693553 intergenic not near genes chr2R 5693655 intergenic not near genes chr2R_28_5690001 chr2R_5690001 RAL-853_125b 1009 chr2R 5710622 5710674 chr2R 5710749 5710801 15 127 3.5 10.0 6.8 1.9 179 chr2R 5710622 intron ap - chr2R 5710712 intron ap - chr2R 5710801 intron ap - chr2R_15_5710001 chr2R_5710001 RAL-853_125b 1010 chr2R 5606803 5606867 chr2R 5736777 5736805 5 129950 26.5 24.5 25.5 0.2 130002 chr2R 5606803 intergenic not near genes chr2R 5671804 5` UTR kune + chr2R 5736805 intergenic not near genes chr2R_5_5670001 chr2R_5670001 RAL-853_125b 1011 chr2R 5750409 5750450 chr2R 5750551 5750592 23 141 10.5 6.5 8.5 2.4 183 chr2R 5750409 intergenic not near genes chr2R 5750500 intergenic not near genes chr2R 5750592 intergenic not near genes chr2R_23_5750001 chr2R_5750001 RAL-853_125b 1012 chr2R 5772478 5772547 chr2R 5772622 5772687 18 143 7.5 2.5 5.0 3.0 209 chr2R 5772478 3` UTR Gp210 + chr2R 5772582 3` UTR Gp210 + chr2R 5772687 3` UTR Gp210 + chr2R_18_5770001 chr2R_5770001 RAL-853_125b 1013 chr2R 5772786 5772852 chr2R 5772918 5772984 16 132 4.5 7.5 6.0 2.3 198 chr2R 5772786 3` UTR Gp210 + chr2R 5772885 3` UTR Gp210 + chr2R 5772984 3` UTR Gp210 + chr2R_16_5770001 chr2R_5770001 RAL-853_125b 1014 chr2R 5779216 5779271 chr2R 5779481 5779544 18 272 3.5 5.5 4.5 3.3 328 chr2R 5779216 intron ZnT41F - chr2R 5779380 intron ZnT41F - chr2R 5779544 intron ZnT41F - chr2R_18_5775001 chr2R_5775001 RAL-853_125b 1015 chr2R 5790419 5790488 chr2R 5790554 5790623 18 135 4.0 7.0 5.5 2.8 204 chr2R 5790419 intergenic not near genes chr2R 5790521 intergenic not near genes chr2R 5790623 intergenic not near genes chr2R_18_5790001 chr2R_5790001 RAL-853_125b 1016 chr2R 5826753 5826821 chr2R 5827021 5827089 30 268 8.0 7.0 7.5 3.5 336 chr2R 5826753 intron dpr12 + chr2R 5826921 intron dpr12 + chr2R 5827089 intron dpr12 + chr2R_30_5825001 chr2R_5825001 RAL-853_125b 1017 chr2R 5840707 5840773 chr2R 5840840 5840906 35 132 7.5 7.0 7.2 4.3 199 chr2R 5840707 intron dpr12 + chr2R 5840806 intron dpr12 + chr2R 5840906 intron dpr12 + chr2R_35_5840001 chr2R_5840001 RAL-853_125b 1018 chr2R 5859936 5860010 chr2R 5860098 5860132 16 157 4.5 7.5 6.0 2.3 196 chr2R 5859936 3` UTR dpr12 + chr2R 5860034 3` UTR dpr12 + chr2R 5860132 3` UTR dpr12 + chr2R_16_5860001 chr2R_5860001 RAL-853_125b 1019 chr2R 5861247 5861278 chr2R 5861418 5861449 10 170 13.5 7.0 10.2 0.9 202 chr2R 5861247 intergenic dpr12 + chr2R 5861348 intergenic not near genes chr2R 5861449 intergenic not near genes chr2R_10_5860001 chr2R_5860001 RAL-853_125b 1020 chr2R 5861279 5861320 chr2R 5861417 5861451 17 162 6.0 6.5 6.2 2.4 172 chr2R 5861279 intergenic dpr12 + chr2R 5861365 intergenic not near genes chr2R 5861451 intergenic not near genes chr2R_17_5860001 chr2R_5860001 RAL-853_125b 1021 chr2R 5869226 5869293 chr2R 5874360 5874427 flea 30 5134 6.0 12.5 9.2 2.9 5201 chr2R 5869226 intergenic not near genes chr2R 5871826 intergenic not near genes chr2R 5874427 intergenic not near genes chr2R_30_5870001 chr2R_5870001 RAL-853_125b 1022 chr2R 5878879 5878952 chr2R 5879009 5879080 20 130 4.0 11.5 7.8 2.3 201 chr2R 5878879 intergenic CG44438 - chr2R 5878980 intergenic CG44438 - chr2R 5879080 intergenic CG44438 - chr2R_20_5875001 chr2R_5875001 RAL-853_125b 1023 chr2R 5885315 5885378 chr2R 5885494 5885557 21 178 10.0 3.0 6.5 2.8 242 chr2R 5885315 5` UTR CR44125 + chr2R 5885436 5` UTR CR44125 + chr2R 5885557 5` UTR CR44125 + chr2R_21_5885001 chr2R_5885001 RAL-853_125b 1024 chr2R 5902117 5902178 chr2R 5909726 5909787 17.6 13 7608 7.0 4.5 5.8 1.9 7670 chr2R 5902117 5` UTR CG43366 + chr2R 5905952 intron CG43366 + chr2R 5909787 intron CG43366 + chr2R_13_5905001 chr2R_5905001 RAL-853_125b 1025 chr2R 5947886 5947924 chr2R 5948088 5948116 10 200 12.0 0.5 6.2 1.4 230 chr2R 5947886 intergenic not near genes chr2R 5948001 intergenic not near genes chr2R 5948116 intergenic not near genes chr2R_10_5945001 chr2R_5945001 RAL-853_125b 1026 chr2R 5948877 5948947 chr2R 5949457 5949512 26 578 9.5 13.0 11.2 2.1 635 chr2R 5948877 intergenic not near genes chr2R 5949194 intergenic not near genes chr2R 5949512 intergenic not near genes chr2R_26_5945001 chr2R_5945001 RAL-853_125b 1027 chr2R 5994417 5994455 chr2R 5994549 5994594 INE-1 12 138 9.5 5.5 7.5 1.4 177 chr2R 5994417 intron Src42A + chr2R 5994506 intron Src42A + chr2R 5994594 intron Src42A + chr2R_12_5990001 chr2R_5990001 RAL-853_125b 1028 chr2R 6016747 6016810 chr2R 6016882 6016944 14 134 6.0 9.0 7.5 1.6 197 chr2R 6016747 intergenic not near genes chr2R 6016846 intergenic not near genes chr2R 6016944 intergenic not near genes chr2R_14_6015001 chr2R_6015001 RAL-853_125b 1029 chr2R 6033411 6033468 chr2R 6033546 6033595 18 132 3.0 9.5 6.2 2.5 184 chr2R 6033411 intron SCAP - chr2R 6033503 intron SCAP - chr2R 6033595 intron SCAP - chr2R_18_6030001 chr2R_6030001 RAL-853_125b 1030 chr2R 6050259 6050340 chr2R 6050402 6050479 16 140 12.5 0.0 6.2 2.2 220 chr2R 6050259 intron CG34212 - chr2R 6050369 intergenic CG34212 - chr2R 6050479 intergenic CG34212 -,CCHa2-R + chr2R_16_6050001 chr2R_6050001 RAL-853_125b 1031 chr2R 6065714 6065782 chr2R 6065876 6065902 25 156 9.5 9.0 9.2 2.5 188 chr2R 6065714 intron CCHa2-R + chr2R 6065808 intron CCHa2-R + chr2R 6065902 exon CCHa2-R + chr2R_25_6065001 chr2R_6065001 RAL-853_125b 1032 chr2R 6088321 6088357 chr2R 6088464 6088500 19 143 14.5 6.5 10.5 1.7 179 chr2R 6088321 intergenic not near genes chr2R 6088410 intergenic not near genes chr2R 6088500 intergenic not near genes chr2R_19_6085001 chr2R_6085001 RAL-853_125b 1033 chr2R 6088359 6088363 chr2R 6088502 6088506 5 143 13.0 13.0 13.0 0.4 147 chr2R 6088359 intergenic not near genes chr2R 6088432 intergenic not near genes chr2R 6088506 intergenic not near genes chr2R_5_6085001 chr2R_6085001 RAL-853_125b 1034 chr2R 6088365 6088389 chr2R 6088483 6088532 14 141 7.5 10.5 9.0 1.4 167 chr2R 6088365 intergenic not near genes chr2R 6088448 intergenic not near genes chr2R 6088532 intergenic not near genes chr2R_14_6085001 chr2R_6085001 RAL-853_125b 1035 chr2R 6096675 6096748 chr2R 6101923 6101966 BS 28 5239 13.5 8.0 10.8 2.4 5291 chr2R 6096675 intron EcR - chr2R 6099320 intron EcR - chr2R 6101966 intron EcR - chr2R_28_6095001 chr2R_6095001 RAL-853_125b 1036 chr2R 6126893 6126962 chr2R 6127051 6127120 32 157 7.0 6.5 6.8 4.1 227 chr2R 6126893 intron EcR - chr2R 6127006 intron EcR - chr2R 6127120 intron EcR - chr2R_32_6125001 chr2R_6125001 RAL-853_125b 1037 chr2R 6168160 6168223 chr2R 6168292 6168340 21 131 6.5 8.5 7.5 2.5 180 chr2R 6168160 intron EcR - chr2R 6168250 intron EcR - chr2R 6168340 intron EcR - chr2R_21_6165001 chr2R_6165001 RAL-853_125b 1038 chr2R 6178072 6178144 chr2R 6178248 6178320 30 176 8.5 7.0 7.8 3.4 248 chr2R 6178072 intergenic not near genes chr2R 6178196 intergenic not near genes chr2R 6178320 intergenic not near genes chr2R_30_6175001 chr2R_6175001 RAL-853_125b 1039 chr2R 3998870 3998878 chr2R 6486796 6486803 4 2487926 39.0 26.5 32.8 0.1 2487933 chr2R 3998870 intergenic not near genes chr2R 5242836 intron Nipped-A - chr2R 6486803 intergenic not near genes chr2R_4_5240001 chr2R_5240001 RAL-853_125b 1040 chr2R 6494495 6494548 chr2R 6499307 6499360 F-element 11 4812 5.0 0.0 2.5 3.1 4865 chr2R 6494495 intergenic not near genes chr2R 6496928 intergenic not near genes chr2R 6499360 intergenic not near genes chr2R_11_6495001 chr2R_6495001 RAL-853_125b 1041 chr2R 6579768 6579793 chr2R 6584905 6584930 flea 12 5137 7.0 9.5 8.2 1.3 5162 chr2R 6579768 intron jing + chr2R 6582349 intron jing + chr2R 6584930 intron jing + chr2R_12_6580001 chr2R_6580001 RAL-853_125b 1042 chr2R 6633153 6633223 chr2R 6633280 6633350 23 125 11.0 9.5 10.2 2.1 197 chr2R 6633153 intergenic Vha16-1 -,Trap1 - chr2R 6633252 intergenic Vha16-1 -,Trap1 - chr2R 6633350 intergenic Vha16-1 -,Trap1 - chr2R_23_6630001 chr2R_6630001 RAL-853_125b 1043 chr2R 6685842 6685877 chr2R 6685974 6686009 10 132 10.0 15.0 12.5 0.7 167 chr2R 6685842 intron,intron CG9422 +,Tdc2 - chr2R 6685926 intron,intron CG9422 +,Tdc2 - chr2R 6686009 intron,intron CG9422 +,Tdc2 - chr2R_10_6685001 chr2R_6685001 RAL-853_125b 1044 chr2R 6699549 6699615 chr2R 6699684 6699750 15 135 5.5 7.5 6.5 2.0 201 chr2R 6699549 intergenic Rab2 + chr2R 6699650 intergenic Rab2 + chr2R 6699750 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_15_6695001 chr2R_6695001 RAL-853_125b 1045 chr2R 6712545 6712601 chr2R 6712686 6712748 31 145 11.5 8.5 10.0 2.8 203 chr2R 6712545 intron,intron CG3409 -,CG45092 - chr2R 6712646 intron,intron CG3409 -,CG45092 - chr2R 6712748 intron,intron CG3409 -,CG45092 - chr2R_31_6710001 chr2R_6710001 RAL-853_125b 1046 chr2R 6797046 6797072 chr2R 6797178 6797200 10 139 16.0 8.5 12.2 0.8 154 chr2R 6797046 5` UTR Epac - chr2R 6797123 5` UTR Epac - chr2R 6797200 5` UTR Epac - chr2R_10_6795001 chr2R_6795001 RAL-853_125b 1047 chr2R 6797073 6797103 chr2R 6797176 6797246 16 132 8.0 7.5 7.8 1.8 173 chr2R 6797073 5` UTR Epac - chr2R 6797160 5` UTR Epac - chr2R 6797246 5` UTR Epac - chr2R_16_6795001 chr2R_6795001 RAL-853_125b 1048 chr2R 6822355 6822430 chr2R 6822482 6822519 23 118 11.0 14.5 12.8 1.7 164 chr2R 6822355 3` UTR CR44442 - chr2R 6822437 3` UTR CR44442 - chr2R 6822519 3` UTR CR44442 - chr2R_23_6820001 chr2R_6820001 RAL-853_125b 1049 chr2R 6831370 6831436 chr2R 6831788 6831854 28 417 6.5 6.5 6.5 3.7 484 chr2R 6831370 intron,3` UTR CG15236 +,CG34215 - chr2R 6831612 intron,exon CG15236 +,CG34215 - chr2R 6831854 intron CG15236 + chr2R_28_6830001 chr2R_6830001 RAL-853_125b 1050 chr2R 6952132 6952185 chr2R 6959755 6959815 opus 14 7630 6.0 6.0 6.0 2.0 7683 chr2R 6952132 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955974 intron,intron mim -,CheB42c - chr2R 6959815 intron,intron mim -,CheB42c - chr2R_14_6955001 chr2R_6955001 RAL-853_125b 1051 chr2R 7008473 7008533 chr2R 7008615 7008675 31 140 10.0 10.0 10.0 2.8 202 chr2R 7008473 3` UTR Tsp42Ec + chr2R 7008574 3` UTR Tsp42Ec + chr2R 7008675 intergenic Tsp42Ec + chr2R_31_7005001 chr2R_7005001 RAL-853_125b 1052 chr2R 7035722 7035795 chr2R 7035879 7035952 34 156 5.0 5.5 5.2 5.5 230 chr2R 7035722 intron Tsp42Ei + chr2R 7035837 intron Tsp42Ei + chr2R 7035952 intron Tsp42Ei + chr2R_34_7035001 chr2R_7035001 RAL-853_125b 1053 chr2R 7129202 7129216 chr2R 7132822 7132891 30 3632 62.5 77.5 70.0 0.4 3689 chr2R 7129202 exon Cyp9b1 - chr2R 7131046 exon Cyp9b2 - chr2R 7132891 intergenic not near genes chr2R_30_7130001 chr2R_7130001 RAL-853_125b 1054 chr2R 7153116 7153191 chr2R 7153252 7153327 44 135 7.5 8.5 8.0 4.9 211 chr2R 7153116 intron,exon pk +,Spn43Ab - chr2R 7153222 intron,intron pk +,Spn43Ab - chr2R 7153327 intron,intron pk +,Spn43Ab - chr2R_44_7150001 chr2R_7150001 RAL-853_125b 1055 chr2R 7186290 7186350 chr2R 7186509 7186569 22 219 6.5 5.5 6.0 3.1 279 chr2R 7186290 intron pk + chr2R 7186430 intron pk + chr2R 7186569 intron pk + chr2R_22_7185001 chr2R_7185001 RAL-853_125b 1056 chr2R 7196524 7196586 chr2R 7201349 7201411 F-element 12 4825 6.0 10.0 8.0 1.3 4887 chr2R 7196524 intron pk + chr2R 7198968 intron pk + chr2R 7201411 intron pk + chr2R_12_7195001 chr2R_7195001 RAL-853_125b 1057 chr2R 7209859 7209873 chr2R 7217670 7217684 roo 8 7811 6.0 11.0 8.5 0.8 7825 chr2R 7209859 intron pk + chr2R 7213772 intron pk + chr2R 7217684 intron pk + chr2R_8_7210001 chr2R_7210001 RAL-853_125b 1058 chr2R 7235782 7235841 chr2R 7240924 7240942 jockey 22 5139 7.5 6.0 6.8 2.8 5160 chr2R 7235782 intergenic not near genes chr2R 7238362 intergenic not near genes chr2R 7240942 intergenic not near genes chr2R_22_7235001 chr2R_7235001 RAL-853_125b 1059 chr2R 7243387 7243415 chr2R 7247758 7247786 6 4371 44.0 59.5 51.8 0.1 4399 chr2R 7243387 3` UTR Ady43A - chr2R 7245586 5` UTR Ady43A - chr2R 7247786 intergenic not near genes chr2R_6_7245001 chr2R_7245001 RAL-853_125b 1060 chr2R 7258704 7258713 chr2R 7259193 7259202 4 488 24.0 8.5 16.2 0.2 498 chr2R 7258704 intergenic CG1850 - chr2R 7258953 3` UTR CG1850 - chr2R 7259202 exon CG1850 - chr2R_4_7255001 chr2R_7255001 RAL-853_125b 1061 chr2R 7258714 7258742 chr2R 7259192 7259212 17 486 18.5 7.0 12.8 1.2 498 chr2R 7258714 intergenic CG1850 - chr2R 7258963 3` UTR CG1850 - chr2R 7259212 exon CG1850 - chr2R_17_7255001 chr2R_7255001 RAL-853_125b 1062 chr2R 7262153 7262204 chr2R 7269259 7269315 297 7 7110 4.5 9.0 6.8 0.9 7162 chr2R 7262153 intergenic not near genes chr2R 7265734 intergenic not near genes chr2R 7269315 intergenic not near genes chr2R_7_7265001 chr2R_7265001 RAL-853_125b 1063 chr2R 7417853 7418152 chr2R 7417989 7418278 38 131 8.0 9.0 8.5 4.0 425 chr2R 7417853 intergenic not near genes chr2R 7418066 intergenic not near genes chr2R 7418278 intergenic not near genes chr2R_38_7415001 chr2R_7415001 RAL-853_125b 1064 chr2R 7418155 7418161 chr2R 7418284 7418290 6 129 7.0 18.0 12.5 0.4 135 chr2R 7418155 intergenic not near genes chr2R 7418222 intergenic not near genes chr2R 7418290 intergenic not near genes chr2R_6_7415001 chr2R_7415001 RAL-853_125b 1065 chr2R 7418163 7418168 chr2R 7418282 7418297 8 128 6.5 17.0 11.8 0.6 134 chr2R 7418163 intergenic not near genes chr2R 7418230 intergenic not near genes chr2R 7418297 intergenic not near genes chr2R_8_7415001 chr2R_7415001 RAL-853_125b 1066 chr2R 7434856 7434904 chr2R 7439206 7439255 Juan 21 4350 10.5 10.0 10.2 1.9 4399 chr2R 7434856 3` UTR so + chr2R 7437056 intergenic not near genes chr2R 7439255 intergenic not near genes chr2R_21_7435001 chr2R_7435001 RAL-853_125b 1067 chr2R 7529012 7529081 chr2R 7529149 7529218 35 136 6.0 8.5 7.2 4.3 206 chr2R 7529012 intron Drat - chr2R 7529115 intron Drat - chr2R 7529218 intron Drat - chr2R_35_7525001 chr2R_7525001 RAL-853_125b 1068 chr2R 7608369 7608371 chr2R 7613622 7613624 I-element 4 5253 20.0 8.5 14.2 0.3 5255 chr2R 7608369 intron CG1358 - chr2R 7610996 intron CG1358 - chr2R 7613624 intron CG1358 - chr2R_4_7610001 chr2R_7610001 RAL-853_125b 1069 chr2R 7608372 7608424 chr2R 7613620 7613677 I-element 19 5252 11.5 8.0 9.8 1.8 5305 chr2R 7608372 intron CG1358 - chr2R 7611024 intron CG1358 - chr2R 7613677 intron CG1358 - chr2R_19_7610001 chr2R_7610001 RAL-853_125b 1070 chr2R 7642817 7642890 chr2R 7642947 7643020 35 129 9.5 9.0 9.2 3.4 203 chr2R 7642817 intron CG43340 + chr2R 7642918 intron CG43340 + chr2R 7643020 intron CG43340 + chr2R_35_7640001 chr2R_7640001 RAL-853_125b 1071 chr2R 7737861 7738159 chr2R 7737990 7738286 23 129 29.0 10.0 19.5 1.1 425 chr2R 7737861 intergenic not near genes chr2R 7738074 intergenic not near genes chr2R 7738286 intergenic not near genes chr2R_23_7735001 chr2R_7735001 RAL-853_125b 1072 chr2R 7738162 7738190 chr2R 7738277 7738317 12 125 19.5 12.0 15.8 0.7 155 chr2R 7738162 intergenic not near genes chr2R 7738240 intergenic not near genes chr2R 7738317 intergenic not near genes chr2R_12_7735001 chr2R_7735001 RAL-853_125b 1073 chr2R 7750765 7750776 chr2R 7750871 7750874 6 109 6.0 10.5 8.2 0.7 109 chr2R 7750765 intron,intron CG30497 -,CG45093 - chr2R 7750820 intron,intron CG30497 -,CG45093 - chr2R 7750874 intron,intron CG30497 -,CG45093 - chr2R_6_7750001 chr2R_7750001 RAL-853_125b 1074 chr2R 7750779 7750809 chr2R 7750868 7750925 13 108 6.0 10.0 8.0 1.4 146 chr2R 7750779 intron,intron CG30497 -,CG45093 - chr2R 7750852 intron,intron CG30497 -,CG45093 - chr2R 7750925 intron,intron CG30497 -,CG45093 - chr2R_13_7750001 chr2R_7750001 RAL-853_125b 1075 chr2R 7815633 7815693 chr2R 7822152 7822212 Burdock 31 6519 5.0 10.0 7.5 3.6 6579 chr2R 7815633 intergenic CG1882 + chr2R 7818922 intergenic not near genes chr2R 7822212 3` UTR cathD - chr2R_31_7815001 chr2R_7815001 RAL-853_125b 1076 chr2R 7862224 7862241 chr2R 7867360 7867379 flea 8 5136 19.0 8.0 13.5 0.6 5155 chr2R 7862224 intron Dgk - chr2R 7864802 intron Dgk - chr2R 7867379 intron Dgk - chr2R_8_7860001 chr2R_7860001 RAL-853_125b 1077 chr2R 7869146 7869161 chr2R 7873982 7873997 Doc 11 4836 13.5 12.5 13.0 0.8 4851 chr2R 7869146 intron Dgk - chr2R 7871572 intron Dgk - chr2R 7873997 intron Dgk - chr2R_11_7870001 chr2R_7870001 RAL-853_125b 1078 chr2R 7869169 7869215 chr2R 7873980 7874015 Doc 14 4830 5.5 11.5 8.5 1.5 4846 chr2R 7869169 intron Dgk - chr2R 7871592 intron Dgk - chr2R 7874015 intron Dgk - chr2R_14_7870001 chr2R_7870001 RAL-853_125b 1079 chr2R 7875564 7875570 chr2R 7876185 7876201 4 628 12.5 9.5 11.0 0.3 637 chr2R 7875564 intron Dgk - chr2R 7875882 intron Dgk - chr2R 7876201 intron Dgk - chr2R_4_7875001 chr2R_7875001 RAL-853_125b 1080 chr2R 7875571 7875591 chr2R 7876177 7876201 8 622 8.0 8.5 8.2 0.9 630 chr2R 7875571 intron Dgk - chr2R 7875886 intron Dgk - chr2R 7876201 intron Dgk - chr2R_8_7875001 chr2R_7875001 RAL-853_125b 1081 chr2R 7897137 7897144 chr2R 7897276 7897283 7 139 0.0 22.0 11.0 0.6 146 chr2R 7897137 intron CG30377 + chr2R 7897210 intron CG30377 + chr2R 7897283 intron CG30377 + chr2R_7_7895001 chr2R_7895001 RAL-853_125b 1082 chr2R 7997390 7997455 chr2R 7997546 7997611 25 156 5.5 7.0 6.2 3.5 221 chr2R 7997390 exon Hey - chr2R 7997500 intron Hey - chr2R 7997611 intron Hey - chr2R_25_7995001 chr2R_7995001 RAL-853_125b 1083 chr2R 8014384 8014452 chr2R 8014519 8014582 19 135 6.0 4.5 5.2 3.1 198 chr2R 8014384 intergenic not near genes chr2R 8014483 intergenic not near genes chr2R 8014582 intergenic not near genes chr2R_19_8010001 chr2R_8010001 RAL-853_125b 1084 chr2R 8015621 8015655 chr2R 8017693 8017726 6 2071 15.0 5.5 10.2 0.5 2105 chr2R 8015621 intergenic mir-4981 + chr2R 8016674 intergenic not near genes chr2R 8017726 intergenic not near genes chr2R_6_8015001 chr2R_8015001 RAL-853_125b 1085 chr2R 8015658 8015664 chr2R 8017691 8017701 4 2050 13.0 5.5 9.2 0.4 2043 chr2R 8015658 intergenic mir-4981 + chr2R 8016680 intergenic not near genes chr2R 8017701 intergenic not near genes chr2R_4_8015001 chr2R_8015001 RAL-853_125b 1086 chr2R 8015665 8015679 chr2R 8017674 8017744 4 2053 7.5 3.5 5.5 0.6 2079 chr2R 8015665 intergenic mir-4981 + chr2R 8016704 intergenic not near genes chr2R 8017744 intergenic not near genes chr2R_4_8015001 chr2R_8015001 RAL-853_125b 1087 chr2R 8089209 8089279 chr2R 8089345 8089415 23 135 9.0 12.5 10.8 1.9 206 chr2R 8089209 3` UTR sut2 + chr2R 8089312 intergenic sut2 +,sut3 + chr2R 8089415 intergenic sut3 +,sut2 + chr2R_23_8085001 chr2R_8085001 RAL-853_125b 1088 chr2R 8157850 8157910 chr2R 8157988 8158048 24 135 10.0 12.5 11.2 2.0 198 chr2R 8157850 5` UTR CR44068 + chr2R 8157949 5` UTR CR44068 + chr2R 8158048 5` UTR CR44068 + chr2R_24_8155001 chr2R_8155001 RAL-853_125b 1089 chr2R 8160887 8160941 chr2R 8161026 8161081 1360 25 139 11.0 17.5 14.2 1.6 194 chr2R 8160887 exon CG8708 - chr2R 8160984 intron CG8708 - chr2R 8161081 intron CG8708 - chr2R_25_8160001 chr2R_8160001 RAL-853_125b 1090 chr2R 8185592 8185663 chr2R 8185732 8185753 21 132 6.5 1.0 3.8 4.4 161 chr2R 8185592 intron LRP1 + chr2R 8185672 intron LRP1 + chr2R 8185753 intron LRP1 + chr2R_21_8185001 chr2R_8185001 RAL-853_125b 1091 chr2R 8186360 8186438 chr2R 8186718 8186795 22 354 6.0 6.0 6.0 3.1 435 chr2R 8186360 intron LRP1 + chr2R 8186578 intron LRP1 + chr2R 8186795 intron LRP1 + chr2R_22_8185001 chr2R_8185001 RAL-853_125b 1092 chr2R 8201121 8201195 chr2R 8201259 8201306 6 134 0.5 3.0 1.8 2.1 185 chr2R 8201121 intron LRP1 + chr2R 8201214 intron LRP1 + chr2R 8201306 intron LRP1 + chr2R_6_8200001 chr2R_8200001 RAL-853_125b 1093 chr2R 8235996 8236027 chr2R 8236127 8236157 11 130 11.5 4.0 7.8 1.2 161 chr2R 8235996 intergenic not near genes chr2R 8236076 intergenic not near genes chr2R 8236157 intergenic not near genes chr2R_11_8235001 chr2R_8235001 RAL-853_125b 1094 chr2R 8330817 8330884 chr2R 8331353 8331420 roo 27 535 13.5 10.5 12.0 2.1 603 chr2R 8330817 intron pdm3 + chr2R 8331118 intron pdm3 + chr2R 8331420 intron pdm3 + chr2R_27_8330001 chr2R_8330001 RAL-853_125b 1095 chr2R 8355196 8355273 chr2R 8355330 8355407 23 133 7.5 6.0 6.8 2.9 211 chr2R 8355196 intron pdm3 + chr2R 8355302 intron pdm3 + chr2R 8355407 intron pdm3 + chr2R_23_8355001 chr2R_8355001 RAL-853_125b 1096 chr2R 8398170 8398235 chr2R 8403001 8403066 Doc 27 4824 6.0 12.5 9.2 2.6 4896 chr2R 8398170 intron CG2121 - chr2R 8400618 intron CG2121 - chr2R 8403066 intron CG2121 - chr2R_27_8400001 chr2R_8400001 RAL-853_125b 1097 chr2R 8416269 8416287 chr2R 8417142 8417152 I-element 6 872 12.0 10.0 11.0 0.5 883 chr2R 8416269 intergenic not near genes chr2R 8416710 intergenic CG43296 - chr2R 8417152 intergenic CG43296 - chr2R_6_8415001 chr2R_8415001 RAL-853_125b 1098 chr2R 8451985 8452064 chr2R 8452118 8452187 28 132 10.5 10.5 10.5 2.4 202 chr2R 8451985 intergenic Mal-A1 - chr2R 8452086 intergenic Mal-A1 - chr2R 8452187 intergenic Mal-A1 - chr2R_28_8450001 chr2R_8450001 RAL-853_125b 1099 chr2R 8489938 8489967 chr2R 8490065 8490094 14 127 2.5 16.0 9.2 1.4 156 chr2R 8489938 intron mtt - chr2R 8490016 intron mtt - chr2R 8490094 intron mtt - chr2R_14_8490001 chr2R_8490001 RAL-853_125b 1100 chr2R 8490564 8490582 chr2R 8492339 8492357 Rt1c 8 1775 12.0 14.0 13.0 0.6 1793 chr2R 8490564 intron mtt - chr2R 8491460 intron mtt - chr2R 8492357 intron mtt - chr2R_8_8490001 chr2R_8490001 RAL-853_125b 1101 chr2R 8536176 8536214 chr2R 8536446 8536496 11 278 13.0 8.5 10.8 0.9 320 chr2R 8536176 intergenic not near genes chr2R 8536336 intergenic not near genes chr2R 8536496 intergenic not near genes chr2R_11_8535001 chr2R_8535001 RAL-853_125b 1102 chr2R 8612534 8612609 chr2R 8612661 8612736 22 126 8.0 8.5 8.2 2.4 202 chr2R 8612534 intron CG8642 - chr2R 8612635 intron CG8642 - chr2R 8612736 intron CG8642 - chr2R_22_8610001 chr2R_8610001 RAL-853_125b 1103 chr2R 8615738 8615802 chr2R 8615900 8615921 28 160 9.0 14.5 11.8 2.2 183 chr2R 8615738 intron Cirl + chr2R 8615830 intron Cirl + chr2R 8615921 5` UTR Cirl + chr2R_28_8615001 chr2R_8615001 RAL-853_125b 1104 chr2R 8722721 8722795 chr2R 8723012 8723046 pogo 28 283 6.0 13.0 9.5 2.7 325 chr2R 8722721 intron CG14767 - chr2R 8722884 intron CG14767 - chr2R 8723046 intron CG14767 - chr2R_28_8720001 chr2R_8720001 RAL-853_125b 1105 chr2R 8777874 8777888 chr2R 8784128 8784142 diver 9 6254 16.0 7.5 11.8 0.7 6268 chr2R 8777874 intergenic not near genes chr2R 8781008 intergenic not near genes chr2R 8784142 intergenic not near genes chr2R_9_8780001 chr2R_8780001 RAL-853_125b 1106 chr2R 8777902 8777943 chr2R 8784156 8784197 diver 8 6254 3.5 13.0 8.2 0.9 6295 chr2R 8777902 intergenic not near genes chr2R 8781050 intergenic not near genes chr2R 8784197 intergenic not near genes chr2R_8_8780001 chr2R_8780001 RAL-853_125b 1107 chr2R 8799024 8799031 chr2R 8799160 8799167 5 136 17.5 13.5 15.5 0.3 143 chr2R 8799024 5` UTR sns + chr2R 8799096 exon sns + chr2R 8799167 exon sns + chr2R_5_8795001 chr2R_8795001 RAL-853_125b 1108 chr2R 8799033 8799046 chr2R 8799158 8799167 4 124 16.5 12.5 14.5 0.3 134 chr2R 8799033 5` UTR sns + chr2R 8799100 exon sns + chr2R 8799167 exon sns + chr2R_4_8795001 chr2R_8795001 RAL-853_125b 1109 chr2R 8816229 8816270 chr2R 8816367 8816369 9 150 5.5 8.5 7.0 1.1 140 chr2R 8816229 intron sns + chr2R 8816299 intron sns + chr2R 8816369 intron sns + chr2R_9_8815001 chr2R_8815001 RAL-853_125b 1110 chr2R 8924415 8924435 chr2R 8924537 8924550 10 124 17.5 6.0 11.8 0.8 135 chr2R 8924415 exon CG8243 + chr2R 8924482 exon CG8243 + chr2R 8924550 exon CG8243 + chr2R_10_8920001 chr2R_8920001 RAL-853_125b 1111 chr2R 8924437 8924455 chr2R 8924534 8924581 7 110 11.5 7.0 9.2 0.7 144 chr2R 8924437 exon CG8243 + chr2R 8924509 exon CG8243 + chr2R 8924581 exon CG8243 + chr2R_7_8920001 chr2R_8920001 RAL-853_125b 1112 chr2R 8982163 8982222 chr2R 8982292 8982351 23 128 9.5 10.0 9.8 2.1 188 chr2R 8982163 intron CG8213 - chr2R 8982257 intron CG8213 - chr2R 8982351 intron CG8213 - chr2R_23_8980001 chr2R_8980001 RAL-853_125b 1113 chr2R 9010866 9010935 chr2R 9011126 9011195 32 258 5.0 6.5 5.8 4.7 329 chr2R 9010866 intron CG8172 - chr2R 9011030 intron CG8172 - chr2R 9011195 intron CG8172 - chr2R_32_9010001 chr2R_9010001 RAL-853_125b 1114 chr2R 9110098 9110163 chr2R 9110237 9110302 20 138 9.5 7.0 8.2 2.2 204 chr2R 9110098 intergenic Pmm45A - chr2R 9110200 intergenic Pmm45A - chr2R 9110302 intergenic tsu + chr2R_20_9110001 chr2R_9110001 RAL-853_125b 1115 chr2R 9151259 9151323 chr2R 9157779 9157843 Burdock 30 6520 12.0 14.5 13.2 2.1 6584 chr2R 9151259 exon CG30345 + chr2R 9154551 intergenic not near genes chr2R 9157843 intergenic CG8008 - chr2R_30_9150001 chr2R_9150001 RAL-853_125b 1116 chr2R 9212651 9212669 chr2R 9213187 9213205 roo 6 536 15.5 5.5 10.5 0.5 554 chr2R 9212651 intergenic CR45309 + chr2R 9212928 intergenic CR45309 + chr2R 9213205 5` UTR CR45309 + chr2R_6_9210001 chr2R_9210001 RAL-853_125b 1117 chr2R 9212673 9212701 chr2R 9213182 9213212 roo 12 530 9.5 5.5 7.5 1.4 539 chr2R 9212673 intergenic CR45309 + chr2R 9212942 intergenic CR45309 + chr2R 9213212 5` UTR CR45309 + chr2R_12_9210001 chr2R_9210001 RAL-853_125b 1118 chr2R 9213209 9213222 chr2R 9213335 9213344 4 126 6.0 17.5 11.8 0.3 135 chr2R 9213209 5` UTR CR45309 + chr2R 9213276 5` UTR CR45309 + chr2R 9213344 5` UTR CR45309 + chr2R_4_9210001 chr2R_9210001 RAL-853_125b 1119 chr2R 9230173 9230243 chr2R 9230303 9230373 39 124 7.5 7.5 7.5 4.6 200 chr2R 9230173 intron hig - chr2R 9230273 intron hig - chr2R 9230373 exon hig - chr2R_39_9230001 chr2R_9230001 RAL-853_125b 1120 chr2R 9325462 9325492 chr2R 9325606 9325636 4 144 0.0 4.0 2.0 1.3 174 chr2R 9325462 intron,intron CG13739 -,CG13954 - chr2R 9325549 intron,intron CG13739 -,CG13954 - chr2R 9325636 intron,intron CG13739 -,CG13954 - chr2R_4_9325001 chr2R_9325001 RAL-853_125b 1121 chr2R 9368077 9368139 chr2R 9368203 9368214 20 113 10.5 1.5 6.0 2.9 137 chr2R 9368077 intron CG13954 - chr2R 9368146 intron CG13954 - chr2R 9368214 intron CG13954 - chr2R_20_9365001 chr2R_9365001 RAL-853_125b 1122 chr2R 9408178 9408245 chr2R 9408311 9408378 29 131 13.5 5.5 9.5 2.8 200 chr2R 9408178 intron wun - chr2R 9408278 intron wun - chr2R 9408378 intron wun - chr2R_29_9405001 chr2R_9405001 RAL-853_125b 1123 chr2R 9480036 9480073 chr2R 9490617 9490654 roo 6 10579 12.0 10.0 11.0 0.5 10618 chr2R 9480036 intergenic not near genes chr2R 9485345 intergenic not near genes chr2R 9490654 intergenic not near genes chr2R_6_9485001 chr2R_9485001 RAL-853_125b 1124 chr2R 9535564 9535633 chr2R 9535757 9535826 39 193 6.0 8.0 7.0 4.9 262 chr2R 9535564 exon brp + chr2R 9535695 intron brp + chr2R 9535826 intron brp + chr2R_39_9535001 chr2R_9535001 RAL-853_125b 1125 chr2R 9561778 9561836 chr2R 9561915 9561974 11 137 7.5 8.0 7.8 1.2 196 chr2R 9561778 3` UTR,intron CR45281 -,CG1809 + chr2R 9561876 3` UTR,intron CR45281 -,CG1809 + chr2R 9561974 3` UTR,intron CR45281 -,CG1809 + chr2R_11_9560001 chr2R_9560001 RAL-853_125b 1126 chr2R 9726570 9726630 chr2R 9734171 9734231 17.6 16 7601 10.5 7.0 8.8 1.6 7661 chr2R 9726570 intron sqa - chr2R 9730400 intron sqa - chr2R 9734231 intron sqa - chr2R_16_9730001 chr2R_9730001 RAL-853_125b 1127 chr2R 9741756 9741800 chr2R 9741883 9741902 17 121 13.0 17.0 15.0 1.1 146 chr2R 9741756 intron sqa - chr2R 9741829 intron sqa - chr2R 9741902 intron sqa - chr2R_17_9740001 chr2R_9740001 RAL-853_125b 1128 chr2R 9761259 9761295 chr2R 9761385 9761385 10 122 6.0 10.5 8.2 1.1 126 chr2R 9761259 intron trpl + chr2R 9761322 intron trpl + chr2R 9761385 intron trpl + chr2R_10_9760001 chr2R_9760001 RAL-853_125b 1129 chr2R 9777505 9777518 chr2R 9777685 9777709 4 185 23.0 10.0 16.5 0.2 204 chr2R 9777505 intron CG1688 - chr2R 9777607 intron CG1688 - chr2R 9777709 intron CG1688 - chr2R_4_9775001 chr2R_9775001 RAL-853_125b 1130 chr2R 9777519 9777571 chr2R 9777683 9777750 7 170 10.0 9.0 9.5 0.7 231 chr2R 9777519 intron CG1688 - chr2R 9777634 intron CG1688 - chr2R 9777750 intron CG1688 - chr2R_7_9775001 chr2R_9775001 RAL-853_125b 1131 chr2R 9790041 9790102 chr2R 9790168 9790229 34 124 8.0 10.0 9.0 3.4 188 chr2R 9790041 intron,5` UTR CG1688 -,CR44208 + chr2R 9790135 intron,5` UTR CG1688 -,CR44208 + chr2R 9790229 intron,5` UTR CG1688 -,CR44208 + chr2R_34_9790001 chr2R_9790001 RAL-853_125b 1132 chr2R 9950255 9950316 chr2R 9950382 9950443 18 127 5.5 7.5 6.5 2.4 188 chr2R 9950255 intron Mef2 - chr2R 9950349 intron Mef2 - chr2R 9950443 intron Mef2 - chr2R_18_9950001 chr2R_9950001 RAL-853_125b 1133 chr2R 9998022 9998089 chr2R 9998166 9998233 10 144 5.5 5.0 5.2 1.6 211 chr2R 9998022 intron Pka-R2 - chr2R 9998128 intron Pka-R2 - chr2R 9998233 intron Pka-R2 - chr2R_10_9995001 chr2R_9995001 RAL-853_125b 1134 chr2R 10005509 10005584 chr2R 10005656 10005731 23 147 7.5 5.5 6.5 3.1 222 chr2R 10005509 intron Pka-R2 - chr2R 10005620 intron Pka-R2 - chr2R 10005731 intron Pka-R2 - chr2R_23_10005001 chr2R_10005001 RAL-853_125b 1135 chr2R 10005806 10005878 chr2R 10007021 10007073 1360 28 1208 11.5 10.0 10.8 2.4 1267 chr2R 10005806 intron Pka-R2 - chr2R 10006440 intron Pka-R2 - chr2R 10007073 intron Pka-R2 - chr2R_28_10005001 chr2R_10005001 RAL-853_125b 1136 chr2R 10008567 10008600 chr2R 10008665 10008738 12 133 1.0 0.5 0.8 6.7 171 chr2R 10008567 intron Pka-R2 - chr2R 10008652 intron Pka-R2 - chr2R 10008738 intron Pka-R2 - chr2R_12_10005001 chr2R_10005001 RAL-853_125b 1137 chr2R 10107147 10107206 chr2R 10107280 10107293 21 134 9.0 9.5 9.2 2.1 146 chr2R 10107147 intron 14-3-3zeta + chr2R 10107220 intron 14-3-3zeta + chr2R 10107293 intron 14-3-3zeta + chr2R_21_10105001 chr2R_10105001 RAL-853_125b 1138 chr2R 10132139 10132214 chr2R 10132269 10132329 27 128 7.5 8.0 7.8 3.1 190 chr2R 10132139 exon gem + chr2R 10132234 intron gem + chr2R 10132329 exon gem + chr2R_27_10130001 chr2R_10130001 RAL-853_125b 1139 chr2R 10155811 10155877 chr2R 10155955 10156021 23 144 10.0 10.5 10.2 2.1 210 chr2R 10155811 intron KCNQ - chr2R 10155916 intron,3` UTR KCNQ -,mlt - chr2R 10156021 intron,3` UTR KCNQ -,mlt - chr2R_23_10155001 chr2R_10155001 RAL-853_125b 1140 chr2R 10168325 10168365 chr2R 10168452 10168492 9 125 9.5 19.5 14.5 0.6 167 chr2R 10168325 intron KCNQ - chr2R 10168408 intron KCNQ - chr2R 10168492 intron KCNQ - chr2R_9_10165001 chr2R_10165001 RAL-853_125b 1141 chr2R 10176837 10176905 chr2R 10186054 10186122 roo 24 9217 9.0 7.0 8.0 2.7 9285 chr2R 10176837 intron KCNQ - chr2R 10181480 intron KCNQ - chr2R 10186122 intron KCNQ - chr2R_24_10180001 chr2R_10180001 RAL-853_125b 1142 chr2R 10234936 10234996 chr2R 10235075 10235125 4 136 7.0 0.0 3.5 0.9 189 chr2R 10234936 intron Hr46 - chr2R 10235030 intron Hr46 - chr2R 10235125 intron Hr46 - chr2R_4_10235001 chr2R_10235001 RAL-853_125b 1143 chr2R 10318460 10318501 chr2R 10318601 10318635 9 139 13.5 9.0 11.2 0.7 175 chr2R 10318460 exon Ndg + chr2R 10318548 intron Ndg + chr2R 10318635 intron Ndg + chr2R_9_10315001 chr2R_10315001 RAL-853_125b 1144 chr2R 10318514 10318538 chr2R 10318635 10318674 11 134 6.5 16.5 11.5 0.9 160 chr2R 10318514 intron Ndg + chr2R 10318594 intron Ndg + chr2R 10318674 intron Ndg + chr2R_11_10315001 chr2R_10315001 RAL-853_125b 1145 chr2R 10319650 10319692 chr2R 10319797 10319840 13 145 3.0 4.0 3.5 2.9 190 chr2R 10319650 exon Ndg + chr2R 10319745 intron Ndg + chr2R 10319840 intron Ndg + chr2R_13_10315001 chr2R_10315001 RAL-853_125b 1146 chr2R 10365989 10366024 chr2R 10366117 10366152 14 124 18.0 8.5 13.2 1.0 163 chr2R 10365989 intron CG42732 - chr2R 10366070 intron CG42732 - chr2R 10366152 intron CG42732 - chr2R_14_10365001 chr2R_10365001 RAL-853_125b 1147 chr2R 10387979 10388003 chr2R 10388091 10388127 13 139 0.0 8.0 4.0 2.6 148 chr2R 10387979 intron CG42732 - chr2R 10388053 intron CG42732 - chr2R 10388127 intron CG42732 - chr2R_13_10385001 chr2R_10385001 RAL-853_125b 1148 chr2R 10409020 10409085 chr2R 10409147 10409211 19 126 0.0 12.5 6.2 2.6 191 chr2R 10409020 intron CG42732 - chr2R 10409116 intron CG42732 - chr2R 10409211 intron,exon CG42732 -,CG33477 - chr2R_19_10405001 chr2R_10405001 RAL-853_125b 1149 chr2R 10411762 10411832 chr2R 10411894 10411964 28 131 9.5 10.5 10.0 2.5 202 chr2R 10411762 intron CG42732 - chr2R 10411863 intron CG42732 - chr2R 10411964 intron CG42732 - chr2R_28_10410001 chr2R_10410001 RAL-853_125b 1150 chr2R 10428983 10429034 chr2R 10429110 10429131 16 123 6.5 6.5 6.5 2.1 148 chr2R 10428983 intergenic not near genes chr2R 10429057 intergenic not near genes chr2R 10429131 intergenic not near genes chr2R_16_10425001 chr2R_10425001 RAL-853_125b 1151 chr2R 10454050 10454122 chr2R 10454176 10454245 18 122 10.0 8.5 9.2 1.8 195 chr2R 10454050 intron,intron Galphao +,Cyp49a1 - chr2R 10454148 intron,intron Galphao +,Cyp49a1 - chr2R 10454245 intron,intron Galphao +,Cyp49a1 - chr2R_18_10450001 chr2R_10450001 RAL-853_125b 1152 chr2R 10562141 10562214 chr2R 10562279 10562352 25 138 5.5 4.5 5.0 4.2 211 chr2R 10562141 exon psq + chr2R 10562246 intron psq + chr2R 10562352 intron psq + chr2R_25_10560001 chr2R_10560001 RAL-853_125b 1153 chr2R 10563202 10563240 chr2R 10563350 10563388 5 145 0.0 10.0 5.0 0.8 186 chr2R 10563202 intron psq + chr2R 10563295 intron psq + chr2R 10563388 intron psq + chr2R_5_10560001 chr2R_10560001 RAL-853_125b 1154 chr2R 10563905 10563914 chr2R 10564146 10564155 4 241 0.0 11.5 5.8 0.6 250 chr2R 10563905 intron psq + chr2R 10564030 intron psq + chr2R 10564155 intron psq + chr2R_4_10560001 chr2R_10560001 RAL-853_125b 1155 chr2R 10574591 10574629 chr2R 10574713 10574761 9 131 14.0 9.5 11.8 0.7 170 chr2R 10574591 intron psq + chr2R 10574676 intron psq + chr2R 10574761 intron psq + chr2R_9_10570001 chr2R_10570001 RAL-853_125b 1156 chr2R 10827282 10827354 chr2R 10827420 10827492 33 136 5.5 6.5 6.0 4.7 210 chr2R 10827282 exon CG12325 + chr2R 10827387 3` UTR CG12325 + chr2R 10827492 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_33_10825001 chr2R_10825001 RAL-853_125b 1157 chr2R 10848279 10848309 chr2R 10848430 10848460 10 151 11.5 6.0 8.8 1.0 181 chr2R 10848279 intron CG30015 - chr2R 10848370 intron CG30015 - chr2R 10848460 exon CG30015 - chr2R_10_10845001 chr2R_10845001 RAL-853_125b 1158 chr2R 10851140 10851214 chr2R 10851275 10851349 28 133 3.5 7.0 5.2 4.5 209 chr2R 10851140 intron CG30015 - chr2R 10851244 intron CG30015 - chr2R 10851349 intron CG30015 - chr2R_28_10850001 chr2R_10850001 RAL-853_125b 1159 chr2R 10860509 10860517 chr2R 10860635 10860643 4 126 5.5 0.0 2.8 1.1 134 chr2R 10860509 intron CG30015 - chr2R 10860576 intron CG30015 - chr2R 10860643 intron CG30015 - chr2R_4_10860001 chr2R_10860001 RAL-853_125b 1160 chr2R 10910795 10910867 chr2R 10910940 10911013 24 143 6.5 7.5 7.0 3.0 218 chr2R 10910795 intergenic Obp47a + chr2R 10910904 intergenic Obp47a + chr2R 10911013 intergenic not near genes chr2R_24_10910001 chr2R_10910001 RAL-853_125b 1161 chr2R 10913555 10913584 chr2R 10914213 10914240 7 657 17.0 5.5 11.2 0.6 685 chr2R 10913555 intergenic not near genes chr2R 10913898 intergenic not near genes chr2R 10914240 intergenic not near genes chr2R_7_10910001 chr2R_10910001 RAL-853_125b 1162 chr2R 10948020 10948042 chr2R 10955621 10955643 17.6 8 7600 1.5 18.0 9.8 0.7 7623 chr2R 10948020 intergenic not near genes chr2R 10951832 intergenic not near genes chr2R 10955643 intergenic not near genes chr2R_8_10950001 chr2R_10950001 RAL-853_125b 1163 chr2R 10959043 10959107 chr2R 10959172 10959236 21 129 0.5 6.5 3.5 4.7 193 chr2R 10959043 intergenic not near genes chr2R 10959140 intergenic not near genes chr2R 10959236 intergenic not near genes chr2R_21_10955001 chr2R_10955001 RAL-853_125b 1164 chr2R 10979617 10979626 chr2R 10980135 10980144 297 4 518 17.5 3.5 10.5 0.3 527 chr2R 10979617 intergenic not near genes chr2R 10979880 intergenic not near genes chr2R 10980144 intergenic not near genes chr2R_4_10975001 chr2R_10975001 RAL-853_125b 1165 chr2R 10979629 10979684 chr2R 10980128 10980202 297 12 512 6.5 3.5 5.0 2.0 573 chr2R 10979629 intergenic not near genes chr2R 10979916 intergenic not near genes chr2R 10980202 intergenic not near genes chr2R_12_10975001 chr2R_10975001 RAL-853_125b 1166 chr2R 11009774 11009839 chr2R 11018998 11019060 roo 31 9222 7.5 12.0 9.8 2.9 9286 chr2R 11009774 intron luna - chr2R 11014417 intron luna - chr2R 11019060 intron luna - chr2R_31_11010001 chr2R_11010001 RAL-853_125b 1167 chr2R 11019837 11019897 chr2R 11024952 11025010 jockey 14 5115 5.5 8.5 7.0 1.8 5173 chr2R 11019837 intron luna - chr2R 11022424 intron luna - chr2R 11025010 intron luna - chr2R_14_11020001 chr2R_11020001 RAL-853_125b 1168 chr2R 11034814 11034881 chr2R 11034949 11035016 7 132 9.0 7.5 8.2 0.8 202 chr2R 11034814 intron luna - chr2R 11034915 intron luna - chr2R 11035016 intron luna - chr2R_7_11030001 chr2R_11030001 RAL-853_125b 1169 chr2R 11044101 11044163 chr2R 11044235 11044287 11 127 8.0 11.5 9.8 1.0 186 chr2R 11044101 intron luna - chr2R 11044194 intron luna - chr2R 11044287 intron luna - chr2R_11_11040001 chr2R_11040001 RAL-853_125b 1170 chr2R 11152572 11152630 chr2R 11152708 11152767 17 136 10.0 6.0 8.0 1.9 195 chr2R 11152572 intron CG13229 - chr2R 11152670 intron CG13229 - chr2R 11152767 intron CG13229 - chr2R_17_11150001 chr2R_11150001 RAL-853_125b 1171 chr2R 11161611 11161654 chr2R 11161801 11161844 15 190 8.0 6.5 7.2 1.8 233 chr2R 11161611 intron,intron CG13229 -,shn + chr2R 11161728 intron,intron CG13229 -,shn + chr2R 11161844 intron,intron CG13229 -,shn + chr2R_15_11160001 chr2R_11160001 RAL-853_125b 1172 chr2R 11179227 11179280 chr2R 11179363 11179416 16 134 12.5 15.0 13.8 1.1 189 chr2R 11179227 intron shn + chr2R 11179322 intron shn + chr2R 11179416 intron shn + chr2R_16_11175001 chr2R_11175001 RAL-853_125b 1173 chr2R 11188168 11188239 chr2R 11188305 11188367 8 134 0.0 10.0 5.0 1.3 199 chr2R 11188168 intron shn + chr2R 11188268 intron shn + chr2R 11188367 intron shn + chr2R_8_11185001 chr2R_11185001 RAL-853_125b 1174 chr2R 11207788 11207837 chr2R 11208025 11208080 BS 23 242 13.5 12.5 13.0 1.6 292 chr2R 11207788 intron shn + chr2R 11207934 intron shn + chr2R 11208080 intron shn + chr2R_23_11205001 chr2R_11205001 RAL-853_125b 1175 chr2R 11263831 11263837 chr2R 11263996 11264003 4 166 0.0 20.5 10.2 0.4 172 chr2R 11263831 intergenic not near genes chr2R 11263917 intergenic not near genes chr2R 11264003 intergenic not near genes chr2R_4_11260001 chr2R_11260001 RAL-853_125b 1176 chr2R 11297582 11297595 chr2R 11301953 11301961 flea 5 4370 19.5 11.5 15.5 0.3 4379 chr2R 11297582 intergenic CG42336 - chr2R 11299772 intergenic not near genes chr2R 11301961 5` UTR CG7741 + chr2R_5_11295001 chr2R_11295001 RAL-853_125b 1177 chr2R 11297602 11297608 chr2R 11301947 11301979 flea 5 4360 14.5 11.0 12.8 0.4 4377 chr2R 11297602 intergenic CG42336 - chr2R 11299790 intergenic not near genes chr2R 11301979 5` UTR CG7741 + chr2R_5_11295001 chr2R_11295001 RAL-853_125b 1178 chr2R 11297609 11297636 chr2R 11301940 11302007 flea 12 4363 8.0 10.0 9.0 1.2 4398 chr2R 11297609 intergenic CG42336 - chr2R 11299808 intergenic not near genes chr2R 11302007 5` UTR CG7741 + chr2R_12_11295001 chr2R_11295001 RAL-853_125b 1179 chr2R 11344097 11344110 chr2R 11344241 11344254 6 144 11.5 9.5 10.5 0.5 157 chr2R 11344097 intergenic alphaTry - chr2R 11344176 intergenic alphaTry - chr2R 11344254 intergenic alphaTry - chr2R_6_11340001 chr2R_11340001 RAL-853_125b 1180 chr2R 11365556 11365573 chr2R 11365709 11365716 6 148 56.0 71.0 63.5 0.1 160 chr2R 11365556 intergenic not near genes chr2R 11365636 intergenic not near genes chr2R 11365716 intergenic not near genes chr2R_6_11365001 chr2R_11365001 RAL-853_125b 1181 chr2R 11384035 11384113 chr2R 11384201 11384233 17 147 7.0 6.5 6.8 2.2 198 chr2R 11384035 5` UTR Sod3 - chr2R 11384134 intergenic Sod3 - chr2R 11384233 intergenic Sod3 - chr2R_17_11380001 chr2R_11380001 RAL-853_125b 1182 chr2R 11415476 11415545 chr2R 11418675 11418744 opus 36 3195 9.0 7.5 8.2 3.9 3268 chr2R 11415476 intron Drip - chr2R 11417110 intron Drip - chr2R 11418744 intron Drip - chr2R_36_11415001 chr2R_11415001 RAL-853_125b 1183 chr2R 11419820 11419886 chr2R 11420000 11420066 22 179 5.5 9.5 7.5 2.6 246 chr2R 11419820 intron Drip - chr2R 11419943 intron Drip - chr2R 11420066 intron Drip - chr2R_22_11415001 chr2R_11415001 RAL-853_125b 1184 chr2R 11436614 11436848 chr2R 11436770 11436974 6 131 9.0 9.5 9.2 0.6 360 chr2R 11436614 intron CG7777 + chr2R 11436794 intron CG7777 + chr2R 11436974 intron CG7777 + chr2R_6_11435001 chr2R_11435001 RAL-853_125b 1185 chr2R 11472603 11472674 chr2R 11473850 11473921 pogo 36 1245 9.0 13.0 11.0 3.0 1318 chr2R 11472603 intergenic not near genes chr2R 11473262 intergenic not near genes chr2R 11473921 intergenic not near genes chr2R_36_11470001 chr2R_11470001 RAL-853_125b 1186 chr2R 11484309 11484321 chr2R 11484436 11484448 8 127 19.0 4.5 11.8 0.6 139 chr2R 11484309 intron inv + chr2R 11484378 intron inv + chr2R 11484448 intron inv + chr2R_8_11480001 chr2R_11480001 RAL-853_125b 1187 chr2R 11484323 11484381 chr2R 11484432 11484508 34 123 9.5 3.5 6.5 4.5 185 chr2R 11484323 intron inv + chr2R 11484416 intron inv + chr2R 11484508 intron inv + chr2R_34_11480001 chr2R_11480001 RAL-853_125b 1188 chr2R 11494263 11494337 chr2R 11494396 11494456 18 132 5.5 6.5 6.0 2.6 193 chr2R 11494263 intron inv + chr2R 11494360 intron inv + chr2R 11494456 intron inv + chr2R_18_11490001 chr2R_11490001 RAL-853_125b 1189 chr2R 11555474 11555520 chr2R 11555640 11555686 16 166 0.0 7.0 3.5 3.6 212 chr2R 11555474 intergenic not near genes chr2R 11555580 intergenic not near genes chr2R 11555686 intergenic not near genes chr2R_16_11555001 chr2R_11555001 RAL-853_125b 1190 chr2R 11561381 11561453 chr2R 11561513 11561578 30 129 8.0 8.0 8.0 3.3 197 chr2R 11561381 intergenic not near genes chr2R 11561480 intergenic not near genes chr2R 11561578 intergenic not near genes chr2R_30_11560001 chr2R_11560001 RAL-853_125b 1191 chr2R 11592789 11592859 chr2R 11592952 11592982 19 159 13.0 9.5 11.2 1.6 193 chr2R 11592789 intron tou - chr2R 11592886 intron tou - chr2R 11592982 intron tou - chr2R_19_11590001 chr2R_11590001 RAL-853_125b 1192 chr2R 11614572 11614794 chr2R 11614710 11614932 43 138 6.0 6.0 6.0 6.1 360 chr2R 11614572 intron tou - chr2R 11614752 intron tou - chr2R 11614932 intron tou - chr2R_43_11610001 chr2R_11610001 RAL-853_125b 1193 chr2R 11631330 11631410 chr2R 11631481 11631540 15 131 0.0 5.0 2.5 4.3 210 chr2R 11631330 intron CG9005 - chr2R 11631435 intron CG9005 - chr2R 11631540 intron CG9005 - chr2R_15_11630001 chr2R_11630001 RAL-853_125b 1194 chr2R 11675554 11675626 chr2R 11675687 11675759 17 133 17.5 16.5 17.0 0.9 205 chr2R 11675554 intron Roc2 - chr2R 11675656 intron Roc2 - chr2R 11675759 intron Roc2 - chr2R_17_11675001 chr2R_11675001 RAL-853_125b 1195 chr2R 11700398 11700451 chr2R 11700528 11700581 9 129 20.0 19.0 19.5 0.4 183 chr2R 11700398 intergenic Ir48b - chr2R 11700490 intergenic Ir48b - chr2R 11700581 intergenic Ir48b - chr2R_9_11700001 chr2R_11700001 RAL-853_125b 1196 chr2R 11724108 11724182 chr2R 11724241 11724315 21 133 3.5 7.0 5.2 3.4 207 chr2R 11724108 intron pyr + chr2R 11724212 intron pyr + chr2R 11724315 exon pyr + chr2R_21_11720001 chr2R_11720001 RAL-853_125b 1197 chr2R 11839514 11839552 chr2R 11839633 11839639 7 115 14.5 11.5 13.0 0.5 125 chr2R 11839514 5` UTR Sobp - chr2R 11839576 5` UTR Sobp - chr2R 11839639 5` UTR Sobp - chr2R_7_11835001 chr2R_11835001 RAL-853_125b 1198 chr2R 11863809 11863886 chr2R 11863946 11864023 26 137 6.5 4.5 5.5 4.0 214 chr2R 11863809 intergenic CG42531 + chr2R 11863916 intergenic CG42531 + chr2R 11864023 intergenic CG42531 + chr2R_26_11860001 chr2R_11860001 RAL-853_125b 1199 chr2R 11932517 11932580 chr2R 11932684 11932747 21 165 8.5 8.5 8.5 2.2 230 chr2R 11932517 intergenic not near genes chr2R 11932632 intergenic not near genes chr2R 11932747 intergenic not near genes chr2R_21_11930001 chr2R_11930001 RAL-853_125b 1200 chr2R 11956848 11956921 chr2R 11956977 11957050 29 128 13.0 11.0 12.0 2.2 202 chr2R 11956848 intron CG13188 + chr2R 11956949 intron CG13188 + chr2R 11957050 intron CG13188 + chr2R_29_11955001 chr2R_11955001 RAL-853_125b 1201 chr2R 11994908 11994979 chr2R 11995048 11995119 27 139 9.0 6.0 7.5 3.2 211 chr2R 11994908 3` UTR CR45319 - chr2R 11995014 3` UTR,5` UTR CR45319 -,CR45318 + chr2R 11995119 3` UTR,5` UTR CR45319 -,CR45318 + chr2R_27_11995001 chr2R_11995001 RAL-853_125b 1202 chr2R 12002126 12002206 chr2R 12002328 12002409 18 202 7.5 7.0 7.2 2.2 283 chr2R 12002126 3` UTR otk - chr2R 12002268 exon otk - chr2R 12002409 exon otk - chr2R_18_12000001 chr2R_12000001 RAL-853_125b 1203 chr2R 12104635 12104699 chr2R 12104765 12104809 24 124 9.5 10.0 9.8 2.2 174 chr2R 12104635 intron jeb - chr2R 12104722 intron jeb - chr2R 12104809 intron jeb - chr2R_24_12100001 chr2R_12100001 RAL-853_125b 1204 chr2R 12185961 12186011 chr2R 12186106 12186156 14 144 10.0 8.5 9.2 1.4 195 chr2R 12185961 intron Cyp6g1 + chr2R 12186058 intron Cyp6g1 + chr2R 12186156 intron Cyp6g1 + chr2R_14_12185001 chr2R_12185001 RAL-853_125b 1205 chr2R 12185223 12185269 chr2R 12188098 12188144 22 2875 32.5 158.0 95.2 0.2 2921 chr2R 12185223 3` UTR,exon CG13175 +,CG33964 + chr2R 12186684 exon Cyp6g1 + chr2R 12188144 3` UTR Cyp6g1 + chr2R_22_12185001 chr2R_12185001 RAL-853_125b 1206 chr2R 12189353 12189406 chr2R 12189596 12189649 28 235 140.5 129.0 134.8 0.2 296 chr2R 12189353 exon Cyp6g2 - chr2R 12189501 exon Cyp6g2 - chr2R 12189649 exon Cyp6g2 - chr2R_28_12185001 chr2R_12185001 RAL-853_125b 1207 chr2R 12187481 12187485 chr2R 12190048 12190051 4 2566 78.5 148.5 113.5 0.0 2570 chr2R 12187481 exon Cyp6g1 + chr2R 12188766 exon Cyp6g2 - chr2R 12190051 exon Cyp6g2 - chr2R_4_12185001 chr2R_12185001 RAL-853_125b 1208 chr2R 12187480 12187510 chr2R 12190054 12190123 100 2577 98.5 141.5 120.0 0.8 2643 chr2R 12187480 exon Cyp6g1 + chr2R 12188802 exon Cyp6g2 - chr2R 12190123 exon Cyp6g2 - chr2R_100_12185001 chr2R_12185001 RAL-853_125b 1209 chr2R 12213849 12213862 chr2R 12213978 12213991 9 129 6.0 12.5 9.2 0.9 142 chr2R 12213849 intergenic CG13171 + chr2R 12213920 intergenic CG13171 + chr2R 12213991 intergenic CG13171 + chr2R_9_12210001 chr2R_12210001 RAL-853_125b 1210 chr2R 12217537 12217597 chr2R 12217663 12217728 23 129 6.5 8.0 7.2 2.8 191 chr2R 12217537 intergenic not near genes chr2R 12217632 intergenic not near genes chr2R 12217728 intergenic not near genes chr2R_23_12215001 chr2R_12215001 RAL-853_125b 1211 chr2R 12272279 12272353 chr2R 12272412 12272473 20 132 11.5 5.5 8.5 2.1 194 chr2R 12272279 intron Cam + chr2R 12272376 intron Cam + chr2R 12272473 intron Cam + chr2R_20_12270001 chr2R_12270001 RAL-853_125b 1212 chr2R 12284265 12284327 chr2R 12284399 12284461 11 134 0.0 9.0 4.5 2.0 196 chr2R 12284265 intron CG42700 + chr2R 12284363 intron CG42700 + chr2R 12284461 intron CG42700 + chr2R_11_12280001 chr2R_12280001 RAL-853_125b 1213 chr2R 12336682 12336725 chr2R 12336794 12336826 9 122 7.0 4.0 5.5 1.4 144 chr2R 12336682 intergenic CG34021 +,CG8490 + chr2R 12336754 intergenic CG34021 + chr2R 12336826 intergenic CG34021 + chr2R_9_12335001 chr2R_12335001 RAL-853_125b 1214 chr2R 12363337 12363415 chr2R 12363819 12363897 26 482 7.0 10.0 8.5 2.7 560 chr2R 12363337 intergenic CG30043 + chr2R 12363617 intergenic CG30043 + chr2R 12363897 intergenic not near genes chr2R_26_12360001 chr2R_12360001 RAL-853_125b 1215 chr2R 12385292 12385378 chr2R 12385427 12385509 26 130 6.0 5.5 5.8 3.8 217 chr2R 12385292 intergenic not near genes chr2R 12385400 intergenic not near genes chr2R 12385509 intergenic not near genes chr2R_26_12385001 chr2R_12385001 RAL-853_125b 1216 chr2R 12413117 12413128 chr2R 12413243 12413254 5 126 8.5 0.0 4.2 1.0 137 chr2R 12413117 intergenic not near genes chr2R 12413186 intergenic not near genes chr2R 12413254 intergenic not near genes chr2R_5_12410001 chr2R_12410001 RAL-853_125b 1217 chr2R 12481140 12481165 chr2R 12482958 12483004 roo 13 1830 9.5 10.0 9.8 1.2 1864 chr2R 12481140 exon Dh44-R2 + chr2R 12482072 intron Dh44-R2 + chr2R 12483004 intron Dh44-R2 + chr2R_13_12480001 chr2R_12480001 RAL-853_125b 1218 chr2R 12501681 12501715 chr2R 12503863 12503927 Rt1c 16 2204 16.5 12.0 14.2 1.1 2246 chr2R 12501681 intron fdl - chr2R 12502804 intron fdl - chr2R 12503927 intron fdl - chr2R_16_12500001 chr2R_12500001 RAL-853_125b 1219 chr2R 12540442 12540448 chr2R 12540575 12540580 7 133 26.0 14.0 20.0 0.3 138 chr2R 12540442 intron fra + chr2R 12540511 intron fra + chr2R 12540580 intron fra + chr2R_7_12540001 chr2R_12540001 RAL-853_125b 1220 chr2R 12540449 12540497 chr2R 12540565 12540624 23 127 12.5 10.5 11.5 1.8 175 chr2R 12540449 intron fra + chr2R 12540536 intron fra + chr2R 12540624 intron fra + chr2R_23_12540001 chr2R_12540001 RAL-853_125b 1221 chr2R 12564997 12565037 chr2R 12565243 12565283 9 246 11.5 5.5 8.5 0.9 286 chr2R 12564997 intergenic CG33775 - chr2R 12565140 intergenic CG33775 - chr2R 12565283 intergenic CG33775 - chr2R_9_12565001 chr2R_12565001 RAL-853_125b 1222 chr2R 12565520 12565589 chr2R 12565940 12566009 21 420 8.0 7.5 7.8 2.4 489 chr2R 12565520 intergenic not near genes chr2R 12565764 intergenic Cyp301a1 + chr2R 12566009 intergenic Cyp301a1 + chr2R_21_12565001 chr2R_12565001 RAL-853_125b 1223 chr2R 12602816 12602834 chr2R 12602950 12602968 9 134 0.0 13.5 6.8 1.2 152 chr2R 12602816 intron Amph + chr2R 12602892 intron Amph + chr2R 12602968 intron Amph + chr2R_9_12600001 chr2R_12600001 RAL-853_125b 1224 chr2R 12627423 12627502 chr2R 12627576 12627645 10 147 0.0 6.5 3.2 2.4 222 chr2R 12627423 intron CG17760 + chr2R 12627534 intron CG17760 + chr2R 12627645 exon CG17760 + chr2R_10_12625001 chr2R_12625001 RAL-853_125b 1225 chr2R 12643740 12643814 chr2R 12643866 12643916 19 118 5.5 8.0 6.8 2.4 176 chr2R 12643740 intron CG8785 - chr2R 12643828 intron CG8785 - chr2R 12643916 exon CG8785 - chr2R_19_12640001 chr2R_12640001 RAL-853_125b 1226 chr2R 12671399 12671418 chr2R 12671556 12671575 9 157 15.5 22.0 18.8 0.5 176 chr2R 12671399 intron CG42708 - chr2R 12671487 intron CG42708 - chr2R 12671575 exon CG42708 - chr2R_9_12670001 chr2R_12670001 RAL-853_125b 1227 chr2R 12693922 12693940 chr2R 12694049 12694067 8 127 5.5 9.0 7.2 1.0 145 chr2R 12693922 intergenic not near genes chr2R 12693994 intergenic not near genes chr2R 12694067 intergenic not near genes chr2R_8_12690001 chr2R_12690001 RAL-853_125b 1228 chr2R 12707480 12707544 chr2R 12715896 12715960 roo 18 8416 9.0 3.0 6.0 2.6 8480 chr2R 12707480 intron CG42663 + chr2R 12711720 intron CG42663 + chr2R 12715960 intron CG42663 + chr2R_18_12710001 chr2R_12710001 RAL-853_125b 1229 chr2R 12728858 12728899 chr2R 12729009 12729047 8 149 0.0 15.5 7.8 0.9 189 chr2R 12728858 intron CG42663 + chr2R 12728952 intron CG42663 + chr2R 12729047 intron CG42663 + chr2R_8_12725001 chr2R_12725001 RAL-853_125b 1230 chr2R 12771280 12771343 chr2R 12771439 12771502 23 159 7.5 9.5 8.5 2.4 222 chr2R 12771280 intergenic not near genes chr2R 12771391 intergenic not near genes chr2R 12771502 intergenic not near genes chr2R_23_12770001 chr2R_12770001 RAL-853_125b 1231 chr2R 12777764 12777777 chr2R 12777905 12777918 6 141 9.5 5.0 7.2 0.7 154 chr2R 12777764 5` UTR CR45266 + chr2R 12777841 5` UTR CR45266 + chr2R 12777918 5` UTR CR45266 + chr2R_6_12775001 chr2R_12775001 RAL-853_125b 1232 chr2R 12789249 12789266 chr2R 12797662 12797679 roo 6 8413 13.0 6.0 9.5 0.6 8430 chr2R 12789249 intron,3` UTR sca +,CR45137 - chr2R 12793464 intron,intron sca +,CR45137 - chr2R 12797679 intron,3` UTR sca +,CR45137 - chr2R_6_12790001 chr2R_12790001 RAL-853_125b 1233 chr2R 12789272 12789326 chr2R 12797661 12797713 roo 20 8400 6.5 5.5 6.0 2.9 8441 chr2R 12789272 intron,3` UTR sca +,CR45137 - chr2R 12793492 intron,intron sca +,CR45137 - chr2R 12797713 intron,3` UTR sca +,CR45137 - chr2R_20_12790001 chr2R_12790001 RAL-853_125b 1234 chr2R 12819103 12819181 chr2R 12819277 12819351 10 165 3.5 0.0 1.8 3.6 248 chr2R 12819103 intergenic not near genes chr2R 12819227 intergenic not near genes chr2R 12819351 intergenic not near genes chr2R_10_12815001 chr2R_12815001 RAL-853_125b 1235 chr2R 12819402 12819472 chr2R 12824521 12824591 jockey 28 5117 7.5 7.0 7.2 3.4 5189 chr2R 12819402 intergenic not near genes chr2R 12821996 intergenic not near genes chr2R 12824591 intergenic not near genes chr2R_28_12820001 chr2R_12820001 RAL-853_125b 1236 chr2R 12908454 12908490 chr2R 12908595 12908630 6 140 0.0 3.5 1.8 2.1 176 chr2R 12908454 intergenic not near genes chr2R 12908542 intergenic not near genes chr2R 12908630 intergenic not near genes chr2R_6_12905001 chr2R_12905001 RAL-853_125b 1237 chr2R 12959331 12959362 chr2R 12959459 12959490 8 128 2.0 10.0 6.0 1.1 159 chr2R 12959331 intergenic not near genes chr2R 12959410 intergenic not near genes chr2R 12959490 intergenic not near genes chr2R_8_12955001 chr2R_12955001 RAL-853_125b 1238 chr2R 13027697 13027729 chr2R 13027826 13027858 12 129 6.5 0.0 3.2 2.9 161 chr2R 13027697 intergenic not near genes chr2R 13027778 intergenic not near genes chr2R 13027858 intergenic not near genes chr2R_12_13025001 chr2R_13025001 RAL-853_125b 1239 chr2R 13043015 13043037 chr2R 13043145 13043167 9 130 0.0 9.0 4.5 1.6 152 chr2R 13043015 intergenic not near genes chr2R 13043091 intergenic not near genes chr2R 13043167 intergenic not near genes chr2R_9_13040001 chr2R_13040001 RAL-853_125b 1240 chr2R 13073607 13073610 chr2R 13073989 13074022 4 404 0.0 31.5 15.8 0.2 415 chr2R 13073607 intron Drl-2 - chr2R 13073814 intron Drl-2 - chr2R 13074022 intron Drl-2 - chr2R_4_13070001 chr2R_13070001 RAL-853_125b 1241 chr2R 13119946 13120019 chr2R 13120169 13120212 29 219 7.5 8.5 8.0 3.2 266 chr2R 13119946 intron CG13325 + chr2R 13120079 intron CG13325 + chr2R 13120212 intron CG13325 + chr2R_29_13120001 chr2R_13120001 RAL-853_125b 1242 chr2R 13136798 13136853 chr2R 13141646 13141686 Doc 25 4846 12.0 9.0 10.5 2.2 4888 chr2R 13136798 exon Cap-G + chr2R 13139242 intron Cap-G + chr2R 13141686 intron Cap-G + chr2R_25_13135001 chr2R_13135001 RAL-853_125b 1243 chr2R 13167388 13167462 chr2R 13167532 13167612 20 146 4.5 0.0 2.2 6.2 224 chr2R 13167388 intron GLaz - chr2R 13167500 intron GLaz - chr2R 13167612 intron GLaz - chr2R_20_13165001 chr2R_13165001 RAL-853_125b 1244 chr2R 13194800 13194853 chr2R 13194947 13194974 21 128 19.5 14.0 16.8 1.2 174 chr2R 13194800 intergenic not near genes chr2R 13194887 intergenic not near genes chr2R 13194974 intergenic not near genes chr2R_21_13190001 chr2R_13190001 RAL-853_125b 1245 chr2R 13220491 13220538 chr2R 13220619 13220687 12 132 0.5 6.5 3.5 2.7 196 chr2R 13220491 intron CG17059 + chr2R 13220589 intron CG17059 + chr2R 13220687 intron CG17059 + chr2R_12_13220001 chr2R_13220001 RAL-853_125b 1246 chr2R 13249529 13249584 chr2R 13249668 13249714 29 137 9.0 0.0 4.5 5.3 185 chr2R 13249529 intron CG4712 - chr2R 13249622 intron CG4712 - chr2R 13249714 intron CG4712 - chr2R_29_13245001 chr2R_13245001 RAL-853_125b 1247 chr2R 13257218 13257290 chr2R 13257348 13257420 21 129 7.0 10.5 8.8 2.1 202 chr2R 13257218 exon CG4716 + chr2R 13257319 exon CG4716 + chr2R 13257420 3` UTR CG4716 + chr2R_21_13255001 chr2R_13255001 RAL-853_125b 1248 chr2R 13300057 13300106 chr2R 13300191 13300239 19 133 6.5 7.5 7.0 2.4 182 chr2R 13300057 intron CG17047 + chr2R 13300148 intron CG17047 + chr2R 13300239 exon CG17047 + chr2R_19_13300001 chr2R_13300001 RAL-853_125b 1249 chr2R 13305451 13305511 chr2R 13305583 13305643 31 131 15.0 12.0 13.5 2.1 192 chr2R 13305451 intergenic not near genes chr2R 13305547 intergenic not near genes chr2R 13305643 intergenic not near genes chr2R_31_13305001 chr2R_13305001 RAL-853_125b 1250 chr2R 13351670 13351713 chr2R 13351786 13351851 16 138 3.5 9.5 6.5 2.1 181 chr2R 13351670 intron CR44206 - chr2R 13351760 intron CR44206 - chr2R 13351851 intron CR44206 - chr2R_16_13350001 chr2R_13350001 RAL-853_125b 1251 chr2R 13356460 13356489 chr2R 13356595 13356609 15 133 21.0 0.0 10.5 1.3 149 chr2R 13356460 intergenic not near genes chr2R 13356534 intergenic not near genes chr2R 13356609 intergenic not near genes chr2R_15_13355001 chr2R_13355001 RAL-853_125b 1252 chr2R 13368741 13368783 chr2R 13368902 13368944 12 161 9.0 13.5 11.2 1.0 203 chr2R 13368741 intergenic not near genes chr2R 13368842 intergenic not near genes chr2R 13368944 intergenic not near genes chr2R_12_13365001 chr2R_13365001 RAL-853_125b 1253 chr2R 13369750 13369759 chr2R 13369876 13369885 4 126 0.0 13.5 6.8 0.5 135 chr2R 13369750 intergenic not near genes chr2R 13369818 intergenic not near genes chr2R 13369885 intergenic not near genes chr2R_4_13365001 chr2R_13365001 RAL-853_125b 1254 chr2R 13431442 13431514 chr2R 13431571 13431643 27 128 11.0 8.5 9.8 2.5 201 chr2R 13431442 intron CG42321 - chr2R 13431542 intron CG42321 - chr2R 13431643 intron CG42321 - chr2R_27_13430001 chr2R_13430001 RAL-853_125b 1255 chr2R 13468856 13468877 chr2R 13468973 13469004 6 124 15.0 2.0 8.5 0.6 148 chr2R 13468856 intron arr - chr2R 13468930 intron arr - chr2R 13469004 intron arr - chr2R_6_13465001 chr2R_13465001 RAL-853_125b 1256 chr2R 13532472 13532539 chr2R 13532638 13532705 20 166 4.0 9.5 6.8 2.6 233 chr2R 13532472 intron Vmat - chr2R 13532588 intron Vmat - chr2R 13532705 intron Vmat - chr2R_20_13530001 chr2R_13530001 RAL-853_125b 1257 chr2R 13533430 13533500 chr2R 13533664 13533735 13 235 11.5 6.5 9.0 1.3 305 chr2R 13533430 intron Vmat - chr2R 13533582 intron Vmat - chr2R 13533735 intron Vmat - chr2R_13_13530001 chr2R_13530001 RAL-853_125b 1258 chr2R 13544512 13544582 chr2R 13544638 13544708 18 126 0.0 4.0 2.0 6.0 196 chr2R 13544512 intron CG6145 - chr2R 13544610 intron CG6145 - chr2R 13544708 intron CG6145 - chr2R_18_13540001 chr2R_13540001 RAL-853_125b 1259 chr2R 13547030 13547091 chr2R 13547276 13547336 13 244 6.5 5.5 6.0 1.9 306 chr2R 13547030 intron CG6145 - chr2R 13547183 intron CG6145 - chr2R 13547336 intron CG6145 - chr2R_13_13545001 chr2R_13545001 RAL-853_125b 1260 chr2R 13554684 13554767 chr2R 13554826 13554902 8 138 0.0 5.0 2.5 2.3 218 chr2R 13554684 intron Roe1 + chr2R 13554793 intron Roe1 + chr2R 13554902 intron Roe1 + chr2R_8_13550001 chr2R_13550001 RAL-853_125b 1261 chr2R 13568161 13568193 chr2R 13568292 13568324 11 130 4.5 6.0 5.2 1.8 163 chr2R 13568161 intergenic not near genes chr2R 13568242 intergenic not near genes chr2R 13568324 intergenic not near genes chr2R_11_13565001 chr2R_13565001 RAL-853_125b 1262 chr2R 13580461 13580525 chr2R 13580861 13580907 jockey 20 397 7.5 9.5 8.5 2.1 446 chr2R 13580461 3` UTR CG6191 - chr2R 13580684 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580907 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_20_13580001 chr2R_13580001 RAL-853_125b 1263 chr2R 13608225 13608291 chr2R 13608359 13608409 27 127 5.0 9.5 7.2 3.3 184 chr2R 13608225 intergenic CG12464 - chr2R 13608317 intergenic CG12464 - chr2R 13608409 intergenic CG12464 - chr2R_27_13605001 chr2R_13605001 RAL-853_125b 1264 chr2R 13608292 13608300 chr2R 13608356 13608373 5 102 3.5 9.0 6.2 0.7 81 chr2R 13608292 intergenic CG12464 - chr2R 13608332 intergenic CG12464 - chr2R 13608373 intergenic CG12464 - chr2R_5_13605001 chr2R_13605001 RAL-853_125b 1265 chr2R 13622168 13622192 chr2R 13622296 13622320 8 128 6.5 13.0 9.8 0.7 152 chr2R 13622168 intergenic not near genes chr2R 13622244 intergenic not near genes chr2R 13622320 intergenic not near genes chr2R_8_13620001 chr2R_13620001 RAL-853_125b 1266 chr2R 13648677 13648752 chr2R 13649158 13649231 26 479 4.5 9.0 6.8 3.3 554 chr2R 13648677 intron fas + chr2R 13648954 intron fas + chr2R 13649231 intron fas + chr2R_26_13645001 chr2R_13645001 RAL-853_125b 1267 chr2R 13649973 13650032 chr2R 13650118 13650177 19 145 8.0 13.0 10.5 1.7 204 chr2R 13649973 intron fas + chr2R 13650075 intron fas + chr2R 13650177 intron fas + chr2R_19_13650001 chr2R_13650001 RAL-853_125b 1268 chr2R 13709796 13709851 chr2R 13709939 13709994 20 143 6.5 12.0 9.2 2.0 198 chr2R 13709796 intron fas + chr2R 13709895 intron fas + chr2R 13709994 intron fas + chr2R_20_13705001 chr2R_13705001 RAL-853_125b 1269 chr2R 13721155 13721228 chr2R 13721288 13721314 31 126 7.5 10.5 9.0 3.1 159 chr2R 13721155 intron fas + chr2R 13721234 intron fas + chr2R 13721314 intron fas + chr2R_31_13720001 chr2R_13720001 RAL-853_125b 1270 chr2R 13726255 13726275 chr2R 13726437 13726457 12 182 5.5 4.5 5.0 2.0 202 chr2R 13726255 exon fas + chr2R 13726356 intron fas + chr2R 13726457 intron fas + chr2R_12_13725001 chr2R_13725001 RAL-853_125b 1271 chr2R 13727807 13727840 chr2R 13727943 13727970 10 135 9.0 12.5 10.8 0.8 163 chr2R 13727807 intron fas + chr2R 13727888 intron fas + chr2R 13727970 intron fas + chr2R_10_13725001 chr2R_13725001 RAL-853_125b 1272 chr2R 13728095 13728153 chr2R 13735802 13735860 opus 10 7707 10.0 5.5 7.8 1.1 7765 chr2R 13728095 intron fas + chr2R 13731978 intron fas + chr2R 13735860 intron fas + chr2R_10_13730001 chr2R_13730001 RAL-853_125b 1273 chr2R 13752778 13752832 chr2R 13752926 13752980 23 147 6.5 13.5 10.0 2.1 202 chr2R 13752778 intergenic not near genes chr2R 13752879 intergenic not near genes chr2R 13752980 intergenic not near genes chr2R_23_13750001 chr2R_13750001 RAL-853_125b 1274 chr2R 13768937 13768991 chr2R 13769086 13769092 12 145 7.5 7.0 7.2 1.5 155 chr2R 13768937 intergenic not near genes chr2R 13769014 intergenic not near genes chr2R 13769092 intergenic not near genes chr2R_12_13765001 chr2R_13765001 RAL-853_125b 1275 chr2R 13770445 13770518 chr2R 13770592 13770658 15 145 0.0 5.0 2.5 4.3 213 chr2R 13770445 intron Cpr50Ca + chr2R 13770552 intron Cpr50Ca + chr2R 13770658 intron Cpr50Ca + chr2R_15_13770001 chr2R_13770001 RAL-853_125b 1276 chr2R 13790277 13790288 chr2R 13790403 13790414 5 126 16.5 1.5 9.0 0.5 137 chr2R 13790277 intergenic not near genes chr2R 13790346 intergenic not near genes chr2R 13790414 intergenic not near genes chr2R_5_13790001 chr2R_13790001 RAL-853_125b 1277 chr2R 13861389 13861432 chr2R 13861519 13861562 22 130 15.5 10.0 12.8 1.6 173 chr2R 13861389 intron CG16935 - chr2R 13861476 intron CG16935 - chr2R 13861562 intron CG16935 - chr2R_22_13860001 chr2R_13860001 RAL-853_125b 1278 chr2R 13868852 13868923 chr2R 13868981 13869052 20 129 3.0 7.0 5.0 3.3 200 chr2R 13868852 intron shot - chr2R 13868952 intron shot - chr2R 13869052 intron shot - chr2R_20_13865001 chr2R_13865001 RAL-853_125b 1279 chr2R 13905570 13905627 chr2R 13907602 13907644 Rt1a 8 2029 0.0 11.0 5.5 1.2 2074 chr2R 13905570 intron shot - chr2R 13906607 intron shot - chr2R 13907644 intron shot - chr2R_8_13905001 chr2R_13905001 RAL-853_125b 1280 chr2R 13908938 13908999 chr2R 13909086 13909147 23 148 5.5 5.5 5.5 3.5 209 chr2R 13908938 intron shot - chr2R 13909042 intron shot - chr2R 13909147 intron shot - chr2R_23_13905001 chr2R_13905001 RAL-853_125b 1281 chr2R 13924436 13924444 chr2R 13924603 13924611 6 167 11.0 7.5 9.2 0.6 175 chr2R 13924436 intron shot - chr2R 13924524 intron shot - chr2R 13924611 intron shot - chr2R_6_13920001 chr2R_13920001 RAL-853_125b 1282 chr2R 13925825 13925891 chr2R 13926029 13926095 21 203 9.0 7.0 8.0 2.3 270 chr2R 13925825 intron shot - chr2R 13925960 intron shot - chr2R 13926095 intron shot - chr2R_21_13925001 chr2R_13925001 RAL-853_125b 1283 chr2R 13986833 13986906 chr2R 13986969 13987045 33 139 8.0 7.0 7.5 3.9 212 chr2R 13986833 intron RN-tre - chr2R 13986939 intron RN-tre - chr2R 13987045 intron RN-tre - chr2R_33_13985001 chr2R_13985001 RAL-853_125b 1284 chr2R 14000188 14000207 chr2R 14000466 14000485 14 278 11.0 9.0 10.0 1.3 297 chr2R 14000188 intron mam + chr2R 14000336 intron mam + chr2R 14000485 intron mam + chr2R_14_14000001 chr2R_14000001 RAL-853_125b 1285 chr2R 14000210 14000253 chr2R 14000461 14000531 13 276 6.5 7.5 7.0 1.6 321 chr2R 14000210 intron mam + chr2R 14000370 intron mam + chr2R 14000531 intron mam + chr2R_13_14000001 chr2R_14000001 RAL-853_125b 1286 chr2R 14141910 14141941 chr2R 14142065 14142096 12 155 17.5 12.0 14.8 0.8 186 chr2R 14141910 intergenic not near genes chr2R 14142003 intergenic not near genes chr2R 14142096 intergenic not near genes chr2R_12_14140001 chr2R_14140001 RAL-853_125b 1287 chr2R 14142397 14142471 chr2R 14142537 14142606 28 140 5.0 6.0 5.5 4.3 209 chr2R 14142397 intergenic not near genes chr2R 14142502 intergenic not near genes chr2R 14142606 intergenic not near genes chr2R_28_14140001 chr2R_14140001 RAL-853_125b 1288 chr2R 14285025 14285051 chr2R 14285149 14285184 10 132 0.0 6.0 3.0 2.5 159 chr2R 14285025 intron Ih + chr2R 14285104 intron Ih + chr2R 14285184 intron Ih + chr2R_10_14285001 chr2R_14285001 RAL-853_125b 1289 chr2R 14322718 14322768 chr2R 14322858 14322908 14 139 13.5 9.0 11.2 1.1 190 chr2R 14322718 intron Shroom + chr2R 14322813 intron Shroom + chr2R 14322908 intron Shroom + chr2R_14_14320001 chr2R_14320001 RAL-853_125b 1290 chr2R 14400482 14400552 chr2R 14400611 14400681 17 125 9.5 11.5 10.5 1.5 199 chr2R 14400482 intergenic not near genes chr2R 14400582 intergenic not near genes chr2R 14400681 intergenic not near genes chr2R_17_14400001 chr2R_14400001 RAL-853_125b 1291 chr2R 14444083 14444153 chr2R 14444217 14444287 8 134 14.0 6.0 10.0 0.7 204 chr2R 14444083 intron Oaz + chr2R 14444185 intron Oaz + chr2R 14444287 intron Oaz + chr2R_8_14440001 chr2R_14440001 RAL-853_125b 1292 chr2R 14449933 14449957 chr2R 14450065 14450076 7 132 18.0 13.0 15.5 0.4 143 chr2R 14449933 intron Oaz + chr2R 14450004 intron Oaz + chr2R 14450076 intron Oaz + chr2R_7_14450001 chr2R_14450001 RAL-853_125b 1293 chr2R 14449958 14449973 chr2R 14450061 14450106 6 129 13.5 13.0 13.2 0.4 148 chr2R 14449958 intron Oaz + chr2R 14450032 intron Oaz + chr2R 14450106 intron Oaz + chr2R_6_14450001 chr2R_14450001 RAL-853_125b 1294 chr2R 14467255 14467325 chr2R 14476463 14476533 roo 37 9207 9.5 10.0 9.8 3.4 9278 chr2R 14467255 intergenic not near genes chr2R 14471894 intergenic not near genes chr2R 14476533 5` UTR CR44462 + chr2R_37_14470001 chr2R_14470001 RAL-853_125b 1295 chr2R 14489171 14489239 chr2R 14489315 14489383 23 144 4.0 4.0 4.0 4.6 212 chr2R 14489171 intron L + chr2R 14489277 intron L + chr2R 14489383 intron L + chr2R_23_14485001 chr2R_14485001 RAL-853_125b 1296 chr2R 14497348 14497399 chr2R 14498564 14498615 1360 14 1215 9.0 9.0 9.0 1.4 1267 chr2R 14497348 3` UTR Cpsf160 - chr2R 14497982 intron Cpsf160 - chr2R 14498615 3` UTR Cpsf160 - chr2R_14_14495001 chr2R_14495001 RAL-853_125b 1297 chr2R 14507644 14507691 chr2R 14507753 14507821 22 113 13.0 14.5 13.8 1.5 177 chr2R 14507644 exon Asx + chr2R 14507732 exon Asx + chr2R 14507821 exon Asx + chr2R_22_14505001 chr2R_14505001 RAL-853_125b 1298 chr2R 14514433 14514499 chr2R 14514579 14514641 11 145 6.5 7.5 7.0 1.4 208 chr2R 14514433 intron,exon Cpr51A -,CG30197 + chr2R 14514537 intron,intron Cpr51A -,CG30197 + chr2R 14514641 intron,intron Cpr51A -,CG30197 + chr2R_11_14510001 chr2R_14510001 RAL-853_125b 1299 chr2R 14541176 14541252 chr2R 14541483 14541559 12 306 6.0 5.0 5.5 1.8 383 chr2R 14541176 intron ttv + chr2R 14541368 intron ttv + chr2R 14541559 intron ttv + chr2R_12_14540001 chr2R_14540001 RAL-853_125b 1300 chr2R 14562135 14562150 chr2R 14562268 14562282 8 132 22.5 13.5 18.0 0.4 147 chr2R 14562135 intron ttv + chr2R 14562208 intron ttv + chr2R 14562282 intron ttv + chr2R_8_14560001 chr2R_14560001 RAL-853_125b 1301 chr2R 14563484 14563513 chr2R 14563603 14563606 10 119 8.0 8.5 8.2 1.1 122 chr2R 14563484 intron ttv + chr2R 14563545 intron ttv + chr2R 14563606 intron ttv + chr2R_10_14560001 chr2R_14560001 RAL-853_125b 1302 chr2R 14565521 14565593 chr2R 14565648 14565721 16 127 9.5 9.0 9.2 1.6 200 chr2R 14565521 intron ttv + chr2R 14565621 intron ttv + chr2R 14565721 intron ttv + chr2R_16_14565001 chr2R_14565001 RAL-853_125b 1303 chr2R 14722263 14722297 chr2R 14722417 14722431 7 151 6.5 12.0 9.2 0.7 168 chr2R 14722263 intergenic not near genes chr2R 14722347 intergenic not near genes chr2R 14722431 intergenic not near genes chr2R_7_14720001 chr2R_14720001 RAL-853_125b 1304 chr2R 14729914 14729985 chr2R 14730048 14730119 7 134 3.5 5.0 4.2 1.3 205 chr2R 14729914 intergenic not near genes chr2R 14730016 intergenic not near genes chr2R 14730119 intergenic not near genes chr2R_7_14730001 chr2R_14730001 RAL-853_125b 1305 chr2R 14733369 14733618 chr2R 14733486 14733747 36 126 9.5 8.0 8.8 3.7 378 chr2R 14733369 intergenic not near genes chr2R 14733558 intergenic not near genes chr2R 14733747 intergenic not near genes chr2R_36_14730001 chr2R_14730001 RAL-853_125b 1306 chr2R 14737580 14737638 chr2R 14737714 14737772 20 131 6.5 7.5 7.0 2.5 192 chr2R 14737580 3` UTR CR43428 - chr2R 14737676 3` UTR CR43428 - chr2R 14737772 3` UTR CR43428 - chr2R_20_14735001 chr2R_14735001 RAL-853_125b 1307 chr2R 14748238 14748306 chr2R 14748368 14748436 16 130 2.0 6.5 4.2 3.1 198 chr2R 14748238 intergenic AttA + chr2R 14748337 intergenic AttA + chr2R 14748436 intergenic AttA + chr2R_16_14745001 chr2R_14745001 RAL-853_125b 1308 chr2R 14796292 14796358 chr2R 14796439 14796505 20 147 4.0 10.0 7.0 2.5 213 chr2R 14796292 intron kn - chr2R 14796398 intron kn - chr2R 14796505 intron kn - chr2R_20_14795001 chr2R_14795001 RAL-853_125b 1309 chr2R 14826349 14826396 chr2R 14826503 14826550 21 153 1.5 3.0 2.2 6.6 201 chr2R 14826349 intergenic not near genes chr2R 14826450 intergenic not near genes chr2R 14826550 intergenic not near genes chr2R_21_14825001 chr2R_14825001 RAL-853_125b 1310 chr2R 14889169 14889241 chr2R 14897827 14897891 Max-element 24 8652 12.0 0.0 6.0 3.4 8722 chr2R 14889169 intergenic Cyp6a8 - chr2R 14893530 intergenic not near genes chr2R 14897891 intergenic not near genes chr2R_24_14890001 chr2R_14890001 RAL-853_125b 1311 chr2R 14911658 14911723 chr2R 14911826 14911896 21 173 9.5 7.5 8.5 2.2 238 chr2R 14911658 intron CG10249 - chr2R 14911777 intron CG10249 - chr2R 14911896 intron CG10249 - chr2R_21_14910001 chr2R_14910001 RAL-853_125b 1312 chr2R 14919105 14919175 chr2R 14919264 14919334 9 159 6.5 0.0 3.2 2.1 229 chr2R 14919105 intron CG10249 - chr2R 14919220 intron CG10249 - chr2R 14919334 intron CG10249 - chr2R_9_14915001 chr2R_14915001 RAL-853_125b 1313 chr2R 14922095 14922135 chr2R 14922221 14922261 18 125 14.0 7.5 10.8 1.5 166 chr2R 14922095 intron CG10249 - chr2R 14922178 intron CG10249 - chr2R 14922261 intron CG10249 - chr2R_18_14920001 chr2R_14920001 RAL-853_125b 1314 chr2R 14934417 14934488 chr2R 14934555 14934630 8 141 1.0 0.0 0.5 5.3 213 chr2R 14934417 intron CG10253 - chr2R 14934524 intron CG10253 - chr2R 14934630 intron CG10253 - chr2R_8_14930001 chr2R_14930001 RAL-853_125b 1315 chr2R 14997309 14997322 chr2R 14997848 14997861 7 539 14.0 1.5 7.8 0.8 552 chr2R 14997309 intergenic not near genes chr2R 14997585 intergenic not near genes chr2R 14997861 intergenic not near genes chr2R_7_14995001 chr2R_14995001 RAL-853_125b 1316 chr2R 14997324 14997375 chr2R 14997845 14997899 12 529 6.0 1.5 3.8 2.5 575 chr2R 14997324 intergenic not near genes chr2R 14997612 intergenic not near genes chr2R 14997899 intergenic not near genes chr2R_12_14995001 chr2R_14995001 RAL-853_125b 1317 chr2R 14998465 14998512 chr2R 14998655 14998702 15 190 10.0 9.0 9.5 1.4 237 chr2R 14998465 intergenic not near genes chr2R 14998584 intergenic not near genes chr2R 14998702 intergenic not near genes chr2R_15_14995001 chr2R_14995001 RAL-853_125b 1318 chr2R 15004685 15004747 chr2R 15005064 15005126 jockey 30 379 10.5 10.0 10.2 2.7 441 chr2R 15004685 intergenic not near genes chr2R 15004906 intergenic not near genes chr2R 15005126 intergenic not near genes chr2R_30_15000001 chr2R_15000001 RAL-853_125b 1319 chr2R 15015414 15015481 chr2R 15022888 15022955 mdg1 18 7473 8.0 5.5 6.8 2.3 7541 chr2R 15015414 intron hbs + chr2R 15019184 intron hbs + chr2R 15022955 intron hbs + chr2R_18_15015001 chr2R_15015001 RAL-853_125b 1320 chr2R 15084939 15085003 chr2R 15092038 15092101 297 14 7099 8.0 6.0 7.0 1.8 7162 chr2R 15084939 intergenic not near genes chr2R 15088520 intergenic not near genes chr2R 15092101 5` UTR CR44457 + chr2R_14_15085001 chr2R_15085001 RAL-853_125b 1321 chr2R 15119274 15119290 chr2R 15127805 15127821 Tirant 5 8531 21.5 6.0 13.8 0.3 8547 chr2R 15119274 intron chn + chr2R 15123548 intron chn + chr2R 15127821 intron chn + chr2R_5_15120001 chr2R_15120001 RAL-853_125b 1322 chr2R 15119291 15119341 chr2R 15127803 15127849 Tirant 23 8524 10.0 6.0 8.0 2.6 8558 chr2R 15119291 intron chn + chr2R 15123570 intron chn + chr2R 15127849 intron chn + chr2R_23_15120001 chr2R_15120001 RAL-853_125b 1323 chr2R 15133441 15133502 chr2R 15133570 15133602 23 127 10.5 10.0 10.2 2.1 161 chr2R 15133441 intron chn + chr2R 15133522 intron chn + chr2R 15133602 intron chn + chr2R_23_15130001 chr2R_15130001 RAL-853_125b 1324 chr2R 15137922 15137991 chr2R 15138051 15138087 17 127 8.5 3.0 5.8 2.5 165 chr2R 15137922 intron chn + chr2R 15138004 intron chn + chr2R 15138087 intron chn + chr2R_17_15135001 chr2R_15135001 RAL-853_125b 1325 chr2R 15196047 15196121 chr2R 15196193 15196266 35 144 12.0 5.5 8.8 3.6 219 chr2R 15196047 intergenic not near genes chr2R 15196156 intergenic not near genes chr2R 15196266 intergenic not near genes chr2R_35_15195001 chr2R_15195001 RAL-853_125b 1326 chr2R 15230389 15230391 chr2R 15230666 15230677 8 278 19.5 0.0 9.8 0.7 288 chr2R 15230389 intron,5` UTR Fs -,CR44370 + chr2R 15230533 intron,5` UTR Fs -,CR44370 + chr2R 15230677 intron,5` UTR Fs -,CR44370 + chr2R_8_15230001 chr2R_15230001 RAL-853_125b 1327 chr2R 15230356 15230360 chr2R 15231011 15231015 5 655 23.0 3.0 13.0 0.4 659 chr2R 15230356 intron,5` UTR Fs -,CR44370 + chr2R 15230686 intron,5` UTR Fs -,CR44370 + chr2R 15231015 intron,5` UTR Fs -,CR44370 + chr2R_5_15230001 chr2R_15230001 RAL-853_125b 1328 chr2R 15296110 15296172 chr2R 15296243 15296305 36 131 5.5 6.5 6.0 5.1 195 chr2R 15296110 intron Trpm - chr2R 15296208 intron Trpm - chr2R 15296305 intron Trpm - chr2R_36_15295001 chr2R_15295001 RAL-853_125b 1329 chr2R 15340649 15340665 chr2R 15349282 15349298 Tirant 10 8633 17.5 13.5 15.5 0.6 8649 chr2R 15340649 intron unc-5 + chr2R 15344974 intron unc-5 + chr2R 15349298 intron unc-5 + chr2R_10_15340001 chr2R_15340001 RAL-853_125b 1330 chr2R 15374795 15375054 chr2R 15374928 15375195 11 154 7.5 6.5 7.0 1.4 400 chr2R 15374795 intergenic not near genes chr2R 15374995 intergenic not near genes chr2R 15375195 intergenic not near genes chr2R_11_15370001 chr2R_15370001 RAL-853_125b 1331 chr2R 15375345 15375359 chr2R 15376181 15376200 4 847 0.0 9.5 4.8 0.7 855 chr2R 15375345 intergenic not near genes chr2R 15375772 intergenic not near genes chr2R 15376200 intergenic dup - chr2R_4_15375001 chr2R_15375001 RAL-853_125b 1332 chr2R 15408435 15408487 chr2R 15408569 15408638 21 147 9.5 4.0 6.8 2.7 203 chr2R 15408435 intron CG43729 + chr2R 15408536 intron CG43729 + chr2R 15408638 intron CG43729 + chr2R_21_15405001 chr2R_15405001 RAL-853_125b 1333 chr2R 15497620 15497696 chr2R 15497749 15497799 19 124 7.0 5.0 6.0 2.7 179 chr2R 15497620 intergenic CG12964 - chr2R 15497710 intergenic CG12964 - chr2R 15497799 intergenic not near genes chr2R_19_15495001 chr2R_15495001 RAL-853_125b 1334 chr2R 15593266 15593299 chr2R 15593401 15593434 12 134 21.5 18.5 20.0 0.6 168 chr2R 15593266 intergenic not near genes chr2R 15593350 intergenic not near genes chr2R 15593434 intergenic not near genes chr2R_12_15590001 chr2R_15590001 RAL-853_125b 1335 chr2R 15606082 15606122 chr2R 15606209 15606249 11 126 5.5 7.0 6.2 1.5 167 chr2R 15606082 intergenic not near genes chr2R 15606166 intergenic not near genes chr2R 15606249 intergenic not near genes chr2R_11_15605001 chr2R_15605001 RAL-853_125b 1336 chr2R 15645628 15645703 chr2R 15645774 15645850 18 139 1.5 0.0 0.8 10.0 222 chr2R 15645628 intron CG42524 + chr2R 15645739 intron CG42524 + chr2R 15645850 intron CG42524 + chr2R_18_15645001 chr2R_15645001 RAL-853_125b 1337 chr2R 15656018 15656042 chr2R 15656159 15656183 9 141 6.5 8.5 7.5 1.1 165 chr2R 15656018 intron CG42524 + chr2R 15656100 intron CG42524 + chr2R 15656183 intron CG42524 + chr2R_9_15655001 chr2R_15655001 RAL-853_125b 1338 chr2R 15679062 15679126 chr2R 15679196 15679260 14 134 5.0 5.5 5.2 2.3 198 chr2R 15679062 intergenic CG8207 -,Vha14-1 - chr2R 15679161 intergenic CG8207 -,Vha14-1 - chr2R 15679260 intergenic Vha14-1 -,CG8207 - chr2R_14_15675001 chr2R_15675001 RAL-853_125b 1339 chr2R 15697852 15697884 chr2R 15697983 15698015 14 131 14.0 0.0 7.0 1.8 163 chr2R 15697852 exon CG33462 + chr2R 15697934 3` UTR CG33462 + chr2R 15698015 intergenic CG33462 + chr2R_14_15695001 chr2R_15695001 RAL-853_125b 1340 chr2R 15721821 15721899 chr2R 15721947 15721998 13 98 9.5 7.5 8.5 1.4 177 chr2R 15721821 intergenic not near genes chr2R 15721910 intergenic not near genes chr2R 15721998 intergenic not near genes chr2R_13_15720001 chr2R_15720001 RAL-853_125b 1341 chr2R 15740454 15740465 chr2R 15740582 15740583 7 126 17.5 13.0 15.2 0.4 129 chr2R 15740454 intron CG30089 + chr2R 15740518 intron CG30089 + chr2R 15740583 intron CG30089 + chr2R_7_15740001 chr2R_15740001 RAL-853_125b 1342 chr2R 15740468 15740509 chr2R 15740578 15740637 14 125 9.5 12.5 11.0 1.2 169 chr2R 15740468 intron CG30089 + chr2R 15740552 intron CG30089 + chr2R 15740637 intron CG30089 + chr2R_14_15740001 chr2R_15740001 RAL-853_125b 1343 chr2R 15828116 15828137 chr2R 15828311 15828347 8 208 3.5 1.5 2.5 2.3 231 chr2R 15828116 intron,intron tun +,Poxn - chr2R 15828232 intron,intron tun +,Poxn - chr2R 15828347 intron,intron tun +,Poxn - chr2R_8_15825001 chr2R_15825001 RAL-853_125b 1344 chr2R 15869229 15869308 chr2R 15869363 15869435 13 128 2.5 0.0 1.2 5.9 206 chr2R 15869229 intergenic Rif1 -,sli - chr2R 15869332 intergenic sli -,Rif1 - chr2R 15869435 intergenic sli -,Rif1 - chr2R_13_15865001 chr2R_15865001 RAL-853_125b 1345 chr2R 15898830 15898902 chr2R 15898978 15899050 22 148 8.5 9.0 8.8 2.2 220 chr2R 15898830 intron sli - chr2R 15898940 intron sli - chr2R 15899050 intron sli - chr2R_22_15895001 chr2R_15895001 RAL-853_125b 1346 chr2R 16037178 16037227 chr2R 16037305 16037321 22 124 23.0 16.5 19.8 1.1 143 chr2R 16037178 intron SP2353 + chr2R 16037250 intron SP2353 + chr2R 16037321 intron SP2353 + chr2R_22_16035001 chr2R_16035001 RAL-853_125b 1347 chr2R 16054910 16054922 chr2R 16055043 16055055 4 133 20.0 19.5 19.8 0.2 145 chr2R 16054910 intron CG8405 + chr2R 16054982 intron CG8405 + chr2R 16055055 intron CG8405 + chr2R_4_16050001 chr2R_16050001 RAL-853_125b 1348 chr2R 16054930 16054959 chr2R 16055042 16055092 18 123 9.0 17.5 13.2 1.3 162 chr2R 16054930 intron CG8405 + chr2R 16055011 intron CG8405 + chr2R 16055092 intron CG8405 + chr2R_18_16055001 chr2R_16055001 RAL-853_125b 1349 chr2R 16061704 16061713 chr2R 16064387 16064395 Burdock 8 2683 0.0 12.5 6.2 1.1 2691 chr2R 16061704 intergenic not near genes chr2R 16063050 intergenic not near genes chr2R 16064395 intergenic not near genes chr2R_8_16060001 chr2R_16060001 RAL-853_125b 1350 chr2R 16225811 16225879 chr2R 16225950 16226017 24 138 3.0 8.0 5.5 3.7 206 chr2R 16225811 intron CG15706 - chr2R 16225914 intron CG15706 - chr2R 16226017 intron CG15706 - chr2R_24_16225001 chr2R_16225001 RAL-853_125b 1351 chr2R 16245371 16245431 chr2R 16245515 16245575 17 144 7.0 7.5 7.2 2.1 204 chr2R 16245371 intron CngA - chr2R 16245473 intron CngA - chr2R 16245575 intron CngA - chr2R_17_16245001 chr2R_16245001 RAL-853_125b 1352 chr2R 16352818 16352866 chr2R 16352951 16352999 11 133 4.5 8.5 6.5 1.5 181 chr2R 16352818 intergenic not near genes chr2R 16352908 intergenic not near genes chr2R 16352999 intergenic not near genes chr2R_11_16350001 chr2R_16350001 RAL-853_125b 1353 chr2R 16503823 16503901 chr2R 16503963 16504040 37 139 4.0 5.0 4.5 6.7 217 chr2R 16503823 intron Sema-2a + chr2R 16503932 intron Sema-2a + chr2R 16504040 intron Sema-2a + chr2R_37_16500001 chr2R_16500001 RAL-853_125b 1354 chr2R 16517995 16518073 chr2R 16518121 16518199 35 124 9.5 7.5 8.5 3.7 204 chr2R 16517995 intron Sema-2a + chr2R 16518097 intron Sema-2a + chr2R 16518199 intron Sema-2a + chr2R_35_16515001 chr2R_16515001 RAL-853_125b 1355 chr2R 16538044 16538087 chr2R 16538188 16538231 20 144 8.5 5.0 6.8 2.6 187 chr2R 16538044 intergenic not near genes chr2R 16538138 intergenic not near genes chr2R 16538231 intergenic not near genes chr2R_20_16535001 chr2R_16535001 RAL-853_125b 1356 chr2R 16539590 16539610 chr2R 16544846 16544866 copia 9 5256 10.5 0.0 5.2 1.5 5276 chr2R 16539590 intergenic not near genes chr2R 16542228 intergenic not near genes chr2R 16544866 intergenic not near genes chr2R_9_16540001 chr2R_16540001 RAL-853_125b 1357 chr2R 16546977 16546982 chr2R 16547107 16547112 4 130 4.0 1.0 2.5 1.1 135 chr2R 16546977 intergenic not near genes chr2R 16547044 intergenic not near genes chr2R 16547112 intergenic not near genes chr2R_4_16545001 chr2R_16545001 RAL-853_125b 1358 chr2R 16552007 16552081 chr2R 16552141 16552160 24 129 4.0 7.5 5.8 3.5 153 chr2R 16552007 intergenic Syn2 + chr2R 16552084 intergenic Syn2 + chr2R 16552160 intergenic Syn2 + chr2R_24_16550001 chr2R_16550001 RAL-853_125b 1359 chr2R 16571831 16571898 chr2R 16571976 16572043 19 145 6.5 11.0 8.8 1.9 212 chr2R 16571831 intergenic CG4927 + chr2R 16571937 intergenic CG4927 + chr2R 16572043 intergenic CG4927 + chr2R_19_16570001 chr2R_16570001 RAL-853_125b 1360 chr2R 16617065 16617088 chr2R 16617195 16617218 7 130 6.5 21.0 13.8 0.5 153 chr2R 16617065 intron CG5065 + chr2R 16617142 intron CG5065 + chr2R 16617218 intron CG5065 + chr2R_7_16615001 chr2R_16615001 RAL-853_125b 1361 chr2R 16713055 16713060 chr2R 16713182 16713193 5 132 0.0 16.0 8.0 0.6 138 chr2R 16713055 intron CG30463 - chr2R 16713124 intron CG30463 - chr2R 16713193 intron CG30463 - chr2R_5_16710001 chr2R_16710001 RAL-853_125b 1362 chr2R 16735397 16735468 chr2R 16735972 16736043 29 571 4.0 5.5 4.8 5.0 646 chr2R 16735397 intergenic not near genes chr2R 16735720 intergenic not near genes chr2R 16736043 intergenic not near genes chr2R_29_16735001 chr2R_16735001 RAL-853_125b 1363 chr2R 16737089 16737127 chr2R 16737239 16737277 13 149 15.0 5.5 10.2 1.2 188 chr2R 16737089 3` UTR CG43104 - chr2R 16737183 3` UTR CG43104 - chr2R 16737277 exon CG43104 - chr2R_13_16735001 chr2R_16735001 RAL-853_125b 1364 chr2R 16737128 16737161 chr2R 16737237 16737311 18 144 10.0 5.5 7.8 2.0 183 chr2R 16737128 3` UTR CG43104 - chr2R 16737220 exon CG43104 - chr2R 16737311 exon CG43104 - chr2R_18_16735001 chr2R_16735001 RAL-853_125b 1365 chr2R 16739394 16739446 chr2R 16739529 16739579 13 133 10.5 0.0 5.2 2.1 185 chr2R 16739394 intergenic not near genes chr2R 16739486 intergenic not near genes chr2R 16739579 intergenic not near genes chr2R_13_16735001 chr2R_16735001 RAL-853_125b 1366 chr2R 16775604 16775669 chr2R 16775921 16775986 27 317 8.0 10.0 9.0 2.7 382 chr2R 16775604 3` UTR Arp53D + chr2R 16775795 intergenic Arp53D + chr2R 16775986 intergenic Arp53D + chr2R_27_16775001 chr2R_16775001 RAL-853_125b 1367 chr2R 16869933 16870005 chr2R 16870062 16870142 17 128 8.0 0.0 4.0 3.4 209 chr2R 16869933 intron CG6426 + chr2R 16870038 intron CG6426 + chr2R 16870142 intron CG6426 + chr2R_17_16870001 chr2R_16870001 RAL-853_125b 1368 chr2R 16892294 16892314 chr2R 16892436 16892456 5 142 5.0 9.0 7.0 0.6 162 chr2R 16892294 intron CG8910 - chr2R 16892375 intron CG8910 - chr2R 16892456 intron CG8910 - chr2R_5_16890001 chr2R_16890001 RAL-853_125b 1369 chr2R 16910180 16910247 chr2R 16910329 16910396 32 149 6.0 12.0 9.0 3.2 216 chr2R 16910180 intergenic not near genes chr2R 16910288 intergenic not near genes chr2R 16910396 intergenic not near genes chr2R_32_16910001 chr2R_16910001 RAL-853_125b 1370 chr2R 16929851 16929872 chr2R 16929983 16930004 6 132 10.5 8.5 9.5 0.6 153 chr2R 16929851 intron Pkc53E + chr2R 16929928 intron Pkc53E + chr2R 16930004 intron Pkc53E + chr2R_6_16925001 chr2R_16925001 RAL-853_125b 1371 chr2R 17098618 17098652 chr2R 17098757 17098791 12 139 8.0 10.0 9.0 1.2 173 chr2R 17098618 intergenic GstS1 - chr2R 17098704 intergenic GstS1 - chr2R 17098791 intergenic GstS1 - chr2R_12_17095001 chr2R_17095001 RAL-853_125b 1372 chr2R 17147199 17147260 chr2R 17152280 17152341 jockey 26 5081 12.0 9.0 10.5 2.3 5142 chr2R 17147199 intergenic not near genes chr2R 17149770 intergenic not near genes chr2R 17152341 intergenic not near genes chr2R_26_17145001 chr2R_17145001 RAL-853_125b 1373 chr2R 17161304 17161364 chr2R 17161561 17161618 13 256 7.0 4.5 5.8 1.9 314 chr2R 17161304 intergenic CG30457 - chr2R 17161461 intergenic not near genes chr2R 17161618 intergenic not near genes chr2R_13_17160001 chr2R_17160001 RAL-853_125b 1374 chr2R 17176357 17176378 chr2R 17182597 17182618 diver 10 6240 0.0 18.5 9.2 1.0 6261 chr2R 17176357 intergenic not near genes chr2R 17179488 intergenic not near genes chr2R 17182618 intergenic not near genes chr2R_10_17175001 chr2R_17175001 RAL-853_125b 1375 chr2R 17236465 17236524 chr2R 17241719 17241778 copia 18 5252 6.0 5.5 5.8 2.6 5313 chr2R 17236465 intron mbl + chr2R 17239122 intron mbl + chr2R 17241778 intron mbl + chr2R_18_17235001 chr2R_17235001 RAL-853_125b 1376 chr2R 17263274 17263323 chr2R 17263405 17263453 19 131 3.0 8.5 5.8 2.8 179 chr2R 17263274 intron mbl + chr2R 17263364 intron mbl + chr2R 17263453 intron mbl + chr2R_19_17260001 chr2R_17260001 RAL-853_125b 1377 chr2R 17393752 17393765 chr2R 17393900 17393913 5 148 21.0 9.5 15.2 0.3 161 chr2R 17393752 intergenic not near genes chr2R 17393832 intergenic not near genes chr2R 17393913 intergenic not near genes chr2R_5_17390001 chr2R_17390001 RAL-853_125b 1378 chr2R 17393766 17393821 chr2R 17393898 17393954 27 142 10.0 9.5 9.8 2.5 188 chr2R 17393766 intergenic not near genes chr2R 17393860 intergenic not near genes chr2R 17393954 intergenic not near genes chr2R_27_17390001 chr2R_17390001 RAL-853_125b 1379 chr2R 17395248 17395301 chr2R 17395369 17395429 27 126 14.0 9.5 11.8 2.1 181 chr2R 17395248 intron Sip1 + chr2R 17395338 intron Sip1 + chr2R 17395429 intron Sip1 + chr2R_27_17395001 chr2R_17395001 RAL-853_125b 1380 chr2R 17419888 17419960 chr2R 17420022 17420088 10 133 0.0 6.0 3.0 2.5 200 chr2R 17419888 5` UTR cnk - chr2R 17419988 5` UTR cnk - chr2R 17420088 intergenic cnk -,l(2)k01209 + chr2R_10_17415001 chr2R_17415001 RAL-853_125b 1381 chr2R 17458959 17459037 chr2R 17459094 17459106 24 132 8.5 10.5 9.5 2.3 147 chr2R 17458959 intron CG14478 + chr2R 17459032 intron CG14478 + chr2R 17459106 intron CG14478 + chr2R_24_17455001 chr2R_17455001 RAL-853_125b 1382 chr2R 17461241 17461317 chr2R 17461447 17461512 25 206 5.0 6.5 5.8 3.7 271 chr2R 17461241 intron CG14478 + chr2R 17461376 intron CG14478 + chr2R 17461512 intron CG14478 + chr2R_25_17460001 chr2R_17460001 RAL-853_125b 1383 chr2R 17485874 17485949 chr2R 17490694 17490767 F-element 24 4818 6.5 6.0 6.2 3.3 4893 chr2R 17485874 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488320 intron NT5E-2 + chr2R 17490767 intron NT5E-2 + chr2R_24_17485001 chr2R_17485001 RAL-853_125b 1384 chr2R 17500614 17500683 chr2R 17500740 17500809 16 126 10.0 8.0 9.0 1.6 195 chr2R 17500614 intergenic not near genes chr2R 17500712 intergenic not near genes chr2R 17500809 intergenic not near genes chr2R_16_17500001 chr2R_17500001 RAL-853_125b 1385 chr2R 17532212 17532224 chr2R 17532339 17532345 7 125 33.5 16.5 25.0 0.3 133 chr2R 17532212 intron Patronin - chr2R 17532278 intron Patronin - chr2R 17532345 intron Patronin - chr2R_7_17530001 chr2R_17530001 RAL-853_125b 1386 chr2R 17532225 17532245 chr2R 17532334 17532365 9 124 25.0 17.5 21.2 0.4 140 chr2R 17532225 intron Patronin - chr2R 17532295 intron Patronin - chr2R 17532365 intron Patronin - chr2R_9_17530001 chr2R_17530001 RAL-853_125b 1387 chr2R 17612544 17612614 chr2R 17612675 17612745 42 129 11.0 13.0 12.0 3.2 201 chr2R 17612544 intron CG10936 - chr2R 17612644 intron CG10936 - chr2R 17612745 intron CG10936 - chr2R_42_17610001 chr2R_17610001 RAL-853_125b 1388 chr2R 17637779 17637860 chr2R 17637910 17637990 11 130 2.5 5.0 3.8 2.3 211 chr2R 17637779 intron CG10936 - chr2R 17637884 intron CG10936 - chr2R 17637990 intron CG10936 - chr2R_11_17635001 chr2R_17635001 RAL-853_125b 1389 chr2R 17708347 17708387 chr2R 17708478 17708518 13 131 7.5 3.0 5.2 2.1 171 chr2R 17708347 intron CG6424 - chr2R 17708432 intron CG6424 - chr2R 17708518 intron CG6424 - chr2R_13_17705001 chr2R_17705001 RAL-853_125b 1390 chr2R 17760626 17760688 chr2R 17760803 17760865 18 177 7.5 7.0 7.2 2.2 239 chr2R 17760626 intergenic HLH54F +,CG5009 + chr2R 17760746 intergenic CG5009 +,HLH54F + chr2R 17760865 intergenic CG5009 +,HLH54F + chr2R_18_17760001 chr2R_17760001 RAL-853_125b 1391 chr2R 17782319 17782387 chr2R 17783572 17783640 pogo 14 1253 4.5 6.5 5.5 2.2 1321 chr2R 17782319 intergenic CG33981 -,fab1 - chr2R 17782980 intergenic not near genes chr2R 17783640 intergenic mir-31a - chr2R_14_17780001 chr2R_17780001 RAL-853_125b 1392 chr2R 17783987 17784047 chr2R 17784270 17784333 pogo 33 289 18.5 11.0 14.8 2.1 346 chr2R 17783987 intergenic mir-31a - chr2R 17784160 intergenic mir-31a - chr2R 17784333 intergenic mir-31a - chr2R_33_17780001 chr2R_17780001 RAL-853_125b 1393 chr2R 17852888 17852951 chr2R 17853029 17853092 27 141 9.0 11.5 10.2 2.4 204 chr2R 17852888 intron olf186-F + chr2R 17852990 intron olf186-F + chr2R 17853092 intron olf186-F + chr2R_27_17850001 chr2R_17850001 RAL-853_125b 1394 chr2R 17918129 17918180 chr2R 17918256 17918307 9 124 10.5 0.0 5.2 1.5 178 chr2R 17918129 intron Elk + chr2R 17918218 intron Elk + chr2R 17918307 intron Elk + chr2R_9_17915001 chr2R_17915001 RAL-853_125b 1395 chr2R 17921411 17921459 chr2R 17921543 17921590 13 132 0.0 9.0 4.5 2.4 179 chr2R 17921411 intron Elk + chr2R 17921500 intron Elk + chr2R 17921590 intron Elk + chr2R_13_17920001 chr2R_17920001 RAL-853_125b 1396 chr2R 17932937 17932942 chr2R 17933065 17933068 6 132 16.0 8.0 12.0 0.5 131 chr2R 17932937 intergenic not near genes chr2R 17933002 intergenic not near genes chr2R 17933068 intergenic not near genes chr2R_6_17930001 chr2R_17930001 RAL-853_125b 1397 chr2R 17963277 17963294 chr2R 17963460 17963477 7 183 22.5 20.0 21.2 0.3 200 chr2R 17963277 intergenic not near genes chr2R 17963377 intergenic not near genes chr2R 17963477 intergenic not near genes chr2R_7_17960001 chr2R_17960001 RAL-853_125b 1398 chr2R 17966106 17966173 chr2R 17966237 17966304 20 124 11.0 11.5 11.2 1.6 198 chr2R 17966106 intergenic not near genes chr2R 17966205 intergenic not near genes chr2R 17966304 intergenic not near genes chr2R_20_17965001 chr2R_17965001 RAL-853_125b 1399 chr2R 17982882 17982950 chr2R 17983017 17983085 24 134 9.5 10.5 10.0 2.2 203 chr2R 17982882 intron dpr13 - chr2R 17982984 intron dpr13 - chr2R 17983085 intron dpr13 - chr2R_24_17980001 chr2R_17980001 RAL-853_125b 1400 chr2R 17990727 17990795 chr2R 17990924 17990994 27 198 2.5 6.0 4.2 5.2 267 chr2R 17990727 intron dpr13 - chr2R 17990860 intron dpr13 - chr2R 17990994 intron dpr13 - chr2R_27_17990001 chr2R_17990001 RAL-853_125b 1401 chr2R 18023121 18023195 chr2R 18023256 18023331 27 136 10.5 14.5 12.5 2.0 210 chr2R 18023121 intergenic not near genes chr2R 18023226 intergenic not near genes chr2R 18023331 intergenic not near genes chr2R_27_18020001 chr2R_18020001 RAL-853_125b 1402 chr2R 18045629 18045697 chr2R 18046031 18046099 jockey 17 402 7.5 7.5 7.5 2.0 470 chr2R 18045629 intergenic not near genes chr2R 18045864 intergenic not near genes chr2R 18046099 intergenic CG5767 - chr2R_17_18045001 chr2R_18045001 RAL-853_125b 1403 chr2R 18110080 18110145 chr2R 18111009 18111074 7 929 29.5 29.0 29.2 0.2 994 chr2R 18110080 exon CG34196 + chr2R 18110577 intergenic CG34196 + chr2R 18111074 intergenic not near genes chr2R_7_18110001 chr2R_18110001 RAL-853_125b 1404 chr2R 18111009 18111085 chr2R 18111355 18111431 24 347 49.0 48.0 48.5 0.5 422 chr2R 18111009 intergenic not near genes chr2R 18111220 intergenic not near genes chr2R 18111431 intergenic not near genes chr2R_24_18110001 chr2R_18110001 RAL-853_125b 1405 chr2R 18111648 18111704 chr2R 18115566 18115622 F-element 17 3918 8.0 7.5 7.8 1.9 3974 chr2R 18111648 intergenic not near genes chr2R 18113635 intergenic not near genes chr2R 18115622 intergenic not near genes chr2R_17_18110001 chr2R_18110001 RAL-853_125b 1406 chr2R 18174673 18174746 chr2R 18174804 18174877 27 130 11.0 8.5 9.8 2.5 204 chr2R 18174673 3` UTR CG10916 + chr2R 18174775 3` UTR CG10916 + chr2R 18174877 3` UTR CG10916 + chr2R_27_18170001 chr2R_18170001 RAL-853_125b 1407 chr2R 18187425 18187496 chr2R 18187548 18187623 25 127 5.5 9.5 7.5 2.9 198 chr2R 18187425 intron CG33958 - chr2R 18187524 intron CG33958 - chr2R 18187623 intron CG33958 - chr2R_25_18185001 chr2R_18185001 RAL-853_125b 1408 chr2R 18289376 18289454 chr2R 18289528 18289606 26 150 6.5 8.0 7.2 3.2 230 chr2R 18289376 intron,intron sbb -,CG14502 + chr2R 18289491 intron,intron sbb -,CG14502 + chr2R 18289606 5` UTR,intron sbb -,CG14502 + chr2R_26_18285001 chr2R_18285001 RAL-853_125b 1409 chr2R 18308240 18308317 chr2R 18308396 18308473 31 156 8.5 9.5 9.0 3.1 233 chr2R 18308240 intron sbb - chr2R 18308356 intron sbb - chr2R 18308473 intron sbb - chr2R_31_18305001 chr2R_18305001 RAL-853_125b 1410 chr2R 18320032 18320082 chr2R 18320195 18320248 11 164 6.0 0.0 3.0 2.8 216 chr2R 18320032 intron sbb - chr2R 18320140 intron sbb - chr2R 18320248 intron sbb - chr2R_11_18320001 chr2R_18320001 RAL-853_125b 1411 chr2R 18322149 18322214 chr2R 18322283 18322323 24 130 4.5 4.5 4.5 4.4 174 chr2R 18322149 intron sbb - chr2R 18322236 intron sbb - chr2R 18322323 intron sbb - chr2R_24_18320001 chr2R_18320001 RAL-853_125b 1412 chr2R 18358347 18358411 chr2R 18372609 18372673 roo 24 14262 10.0 7.0 8.5 2.5 14326 chr2R 18358347 intergenic not near genes chr2R 18365510 intergenic not near genes chr2R 18372673 intergenic not near genes chr2R_24_18365001 chr2R_18365001 RAL-853_125b 1413 chr2R 18376695 18376756 chr2R 18376835 18376896 16 139 2.5 10.5 6.5 2.1 201 chr2R 18376695 intergenic not near genes chr2R 18376796 intergenic not near genes chr2R 18376896 intergenic not near genes chr2R_16_18375001 chr2R_18375001 RAL-853_125b 1414 chr2R 18398677 18398688 chr2R 18402508 18402519 10 3831 43.0 18.0 30.5 0.3 3842 chr2R 18398677 exon GstE1 + chr2R 18400598 intergenic GstE3 +,GstE2 + chr2R 18402519 intergenic not near genes chr2R_10_18400001 chr2R_18400001 RAL-853_125b 1415 chr2R 18405708 18405780 chr2R 18405839 18405910 14 130 4.5 5.5 5.0 2.3 202 chr2R 18405708 intergenic GstE6 +,GstE5 + chr2R 18405809 intergenic GstE6 +,GstE5 + chr2R 18405910 intergenic GstE6 + chr2R_14_18405001 chr2R_18405001 RAL-853_125b 1416 chr2R 18466256 18466330 chr2R 18466399 18466473 40 143 8.0 9.5 8.8 4.1 217 chr2R 18466256 intron CG30116 - chr2R 18466364 intron CG30116 - chr2R 18466473 intron CG30116 - chr2R_40_18465001 chr2R_18465001 RAL-853_125b 1417 chr2R 18487800 18487829 chr2R 18495289 18495330 blood 14 7499 9.5 6.5 8.0 1.6 7530 chr2R 18487800 intron CG30116 - chr2R 18491565 intron CG30116 - chr2R 18495330 intron CG30116 - chr2R_14_18490001 chr2R_18490001 RAL-853_125b 1418 chr2R 18502285 18502355 chr2R 18502713 18502741 25 419 3.5 10.5 7.0 3.1 456 chr2R 18502285 intergenic not near genes chr2R 18502513 intergenic not near genes chr2R 18502741 intergenic not near genes chr2R_25_18500001 chr2R_18500001 RAL-853_125b 1419 chr2R 18511534 18511615 chr2R 18511674 18511751 23 136 7.5 4.0 5.8 3.4 217 chr2R 18511534 intergenic not near genes chr2R 18511642 intergenic not near genes chr2R 18511751 intergenic not near genes chr2R_23_18510001 chr2R_18510001 RAL-853_125b 1420 chr2R 18575756 18575797 chr2R 18581994 18582035 3S18 10 6235 13.0 10.5 11.8 0.8 6279 chr2R 18575756 intron GEFmeso - chr2R 18578896 intron GEFmeso - chr2R 18582035 intron GEFmeso - chr2R_10_18575001 chr2R_18575001 RAL-853_125b 1421 chr2R 18575803 18575826 chr2R 18581983 18582054 3S18 23 6214 7.0 7.0 7.0 2.9 6251 chr2R 18575803 intron GEFmeso - chr2R 18578928 intron GEFmeso - chr2R 18582054 intron GEFmeso - chr2R_23_18575001 chr2R_18575001 RAL-853_125b 1422 chr2R 18590824 18590895 chr2R 18600026 18600078 roo 23 9197 5.0 5.5 5.2 3.7 9254 chr2R 18590824 intron GEFmeso - chr2R 18595451 intron GEFmeso - chr2R 18600078 intron GEFmeso - chr2R_23_18595001 chr2R_18595001 RAL-853_125b 1423 chr2R 18646383 18646434 chr2R 18646578 18646629 26 194 7.5 12.0 9.8 2.4 246 chr2R 18646383 intron SP2637 - chr2R 18646506 intron SP2637 - chr2R 18646629 intron SP2637 - chr2R_26_18645001 chr2R_18645001 RAL-853_125b 1424 chr2R 18692850 18692921 chr2R 18692987 18693057 26 137 4.5 1.5 3.0 6.5 207 chr2R 18692850 exon Sik3 + chr2R 18692954 intron Sik3 + chr2R 18693057 intron Sik3 + chr2R_26_18690001 chr2R_18690001 RAL-853_125b 1425 chr2R 18735291 18735344 chr2R 18735421 18735438 14 120 7.0 14.5 10.8 1.2 147 chr2R 18735291 intron Hs3st-A + chr2R 18735364 intron Hs3st-A + chr2R 18735438 intron Hs3st-A + chr2R_14_18735001 chr2R_18735001 RAL-853_125b 1426 chr2R 18736742 18736777 chr2R 18736916 18736952 17 174 13.0 10.5 11.8 1.3 210 chr2R 18736742 intron Hs3st-A + chr2R 18736847 intron Hs3st-A + chr2R 18736952 intron Hs3st-A + chr2R_17_18735001 chr2R_18735001 RAL-853_125b 1427 chr2R 18738167 18738232 chr2R 18738293 18738358 18 126 0.0 5.0 2.5 5.1 191 chr2R 18738167 intron Hs3st-A + chr2R 18738262 intron Hs3st-A + chr2R 18738358 intron Hs3st-A + chr2R_18_18735001 chr2R_18735001 RAL-853_125b 1428 chr2R 18769588 18769615 chr2R 18769745 18769773 4 157 17.5 16.5 17.0 0.2 185 chr2R 18769588 intron Mctp + chr2R 18769680 intron Mctp + chr2R 18769773 intron Mctp + chr2R_4_18765001 chr2R_18765001 RAL-853_125b 1429 chr2R 18815219 18815281 chr2R 18815405 18815467 21 184 6.5 6.0 6.2 2.9 248 chr2R 18815219 5` UTR,5` UTR CG15096 -,CR43418 + chr2R 18815343 5` UTR,5` UTR CG15096 -,CR43418 + chr2R 18815467 5` UTR,5` UTR CG15096 -,CR43418 + chr2R_21_18815001 chr2R_18815001 RAL-853_125b 1430 chr2R 18953116 18953123 chr2R 18953253 18953260 5 137 17.0 5.5 11.2 0.4 144 chr2R 18953116 intron sano + chr2R 18953188 intron sano + chr2R 18953260 intron sano + chr2R_5_18950001 chr2R_18950001 RAL-853_125b 1431 chr2R 18953124 18953186 chr2R 18953251 18953323 14 131 6.0 5.0 5.5 2.2 199 chr2R 18953124 intron sano + chr2R 18953224 intron sano + chr2R 18953323 intron sano + chr2R_14_18950001 chr2R_18950001 RAL-853_125b 1432 chr2R 19012897 19012961 chr2R 19013041 19013105 27 142 3.5 10.5 7.0 3.4 208 chr2R 19012897 intergenic not near genes chr2R 19013001 intergenic not near genes chr2R 19013105 intergenic not near genes chr2R_27_19010001 chr2R_19010001 RAL-853_125b 1433 chr2R 19025996 19026050 chr2R 19026186 19026240 21 190 14.5 8.0 11.2 1.7 244 chr2R 19025996 exon 5-HT1B - chr2R 19026118 intron 5-HT1B - chr2R 19026240 intron 5-HT1B - chr2R_21_19025001 chr2R_19025001 RAL-853_125b 1434 chr2R 19042648 19042697 chr2R 19042782 19042807 17 127 15.0 10.0 12.5 1.3 159 chr2R 19042648 intergenic not near genes chr2R 19042728 intergenic not near genes chr2R 19042807 intergenic not near genes chr2R_17_19040001 chr2R_19040001 RAL-853_125b 1435 chr2R 19067699 19067743 chr2R 19067825 19067869 4 126 8.0 0.0 4.0 0.8 170 chr2R 19067699 intron 5-HT1A + chr2R 19067784 intron 5-HT1A + chr2R 19067869 intron 5-HT1A + chr2R_4_19065001 chr2R_19065001 RAL-853_125b 1436 chr2R 19103361 19103427 chr2R 19103501 19103559 11 133 7.0 3.0 5.0 1.8 198 chr2R 19103361 intron 5-HT1A + chr2R 19103460 intron 5-HT1A + chr2R 19103559 intron 5-HT1A + chr2R_11_19100001 chr2R_19100001 RAL-853_125b 1437 chr2R 19168692 19168768 chr2R 19168821 19168901 26 133 8.0 6.0 7.0 3.2 209 chr2R 19168692 intron CG10737 + chr2R 19168796 intron CG10737 + chr2R 19168901 intron CG10737 + chr2R_26_19165001 chr2R_19165001 RAL-853_125b 1438 chr2R 19203318 19203339 chr2R 19203684 19203750 25 373 20.5 54.0 37.2 0.7 432 chr2R 19203318 intron hppy + chr2R 19203534 intron hppy + chr2R 19203750 intron hppy + chr2R_25_19200001 chr2R_19200001 RAL-853_125b 1439 chr2R 19234799 19234863 chr2R 19234931 19234995 21 131 8.0 7.0 7.5 2.5 196 chr2R 19234799 intron cora + chr2R 19234897 intron cora + chr2R 19234995 intron cora + chr2R_21_19230001 chr2R_19230001 RAL-853_125b 1440 chr2R 19281465 19281543 chr2R 19281595 19281667 20 129 7.0 8.0 7.5 2.4 202 chr2R 19281465 3` UTR CG11906 - chr2R 19281566 3` UTR CG11906 - chr2R 19281667 exon CG11906 - chr2R_20_19280001 chr2R_19280001 RAL-853_125b 1441 chr2R 19300917 19300990 chr2R 19301050 19301124 27 134 0.0 6.0 3.0 6.8 207 chr2R 19300917 intron Tab2 + chr2R 19301020 intron Tab2 + chr2R 19301124 intron Tab2 + chr2R_27_19300001 chr2R_19300001 RAL-853_125b 1442 chr2R 19363140 19363218 chr2R 19363266 19363344 9 126 2.0 0.5 1.2 4.1 204 chr2R 19363140 intergenic CG10051 + chr2R 19363242 intergenic CG10051 + chr2R 19363344 intergenic CG10051 + chr2R_9_19360001 chr2R_19360001 RAL-853_125b 1443 chr2R 19384906 19384911 chr2R 19385044 19385049 4 138 14.5 0.0 7.2 0.5 143 chr2R 19384906 3` UTR CG10073 + chr2R 19384978 intergenic CG10073 + chr2R 19385049 intergenic CG10073 + chr2R_4_19380001 chr2R_19380001 RAL-853_125b 1444 chr2R 19385230 19385309 chr2R 19385563 19385645 15 335 5.0 4.0 4.5 2.7 415 chr2R 19385230 intergenic CG10073 + chr2R 19385438 intergenic CG10073 +,CG10081 + chr2R 19385645 intergenic CG10081 + chr2R_15_19385001 chr2R_19385001 RAL-853_125b 1445 chr2R 19531935 19531972 chr2R 19532074 19532110 8 135 3.0 9.5 6.2 1.1 175 chr2R 19531935 intron sm - chr2R 19532022 intron sm - chr2R 19532110 intron sm - chr2R_8_19530001 chr2R_19530001 RAL-853_125b 1446 chr2R 19536421 19536494 chr2R 19536553 19536626 22 132 11.5 10.5 11.0 1.8 205 chr2R 19536421 intron sm - chr2R 19536524 intron sm - chr2R 19536626 intron sm - chr2R_22_19535001 chr2R_19535001 RAL-853_125b 1447 chr2R 19549580 19549647 chr2R 19549711 19549777 15 131 6.5 0.0 3.2 3.6 197 chr2R 19549580 intron sm - chr2R 19549678 intron sm - chr2R 19549777 intron sm - chr2R_15_19545001 chr2R_19545001 RAL-853_125b 1448 chr2R 19575518 19575580 chr2R 19575646 19575708 27 128 6.0 5.0 5.5 4.2 190 chr2R 19575518 intron sm - chr2R 19575613 intron sm - chr2R 19575708 intron sm - chr2R_27_19575001 chr2R_19575001 RAL-853_125b 1449 chr2R 19603919 19604000 chr2R 19604058 19604134 10 138 1.0 7.5 4.2 1.9 215 chr2R 19603919 intron sm - chr2R 19604026 intron sm - chr2R 19604134 intron sm - chr2R_10_19600001 chr2R_19600001 RAL-853_125b 1450 chr2R 19652834 19652852 chr2R 19653229 19653263 8 410 16.5 6.0 11.2 0.7 429 chr2R 19652834 3` UTR CR44212 - chr2R 19653048 intergenic CR44212 -,CR44213 + chr2R 19653263 intergenic CR44213 +,CR44212 - chr2R_8_19650001 chr2R_19650001 RAL-853_125b 1451 chr2R 19652854 19652879 chr2R 19653224 19653290 12 405 10.0 6.0 8.0 1.3 436 chr2R 19652854 3` UTR CR44212 - chr2R 19653072 intergenic CR44212 -,CR44213 + chr2R 19653290 intergenic CR44213 +,CR44212 - chr2R_12_19650001 chr2R_19650001 RAL-853_125b 1452 chr2R 19715813 19715857 chr2R 19723332 19723376 blood 23 7517 11.5 15.0 13.2 1.6 7563 chr2R 19715813 intergenic not near genes chr2R 19719594 intergenic not near genes chr2R 19723376 intergenic not near genes chr2R_23_19715001 chr2R_19715001 RAL-853_125b 1453 chr2R 19776551 19776614 chr2R 19779924 19779958 jockey 26 3368 13.5 9.5 11.5 2.1 3407 chr2R 19776551 intergenic not near genes chr2R 19778254 intergenic not near genes chr2R 19779958 intergenic not near genes chr2R_26_19775001 chr2R_19775001 RAL-853_125b 1454 chr2R 19810624 19810658 chr2R 19810757 19810791 16 128 12.0 5.5 8.8 1.6 167 chr2R 19810624 intergenic not near genes chr2R 19810708 intergenic not near genes chr2R 19810791 intergenic not near genes chr2R_16_19810001 chr2R_19810001 RAL-853_125b 1455 chr2R 19914802 19914866 chr2R 19922264 19922328 mdg1 18 7462 4.0 7.0 5.5 2.8 7526 chr2R 19914802 intergenic not near genes chr2R 19918565 intergenic not near genes chr2R 19922328 intergenic not near genes chr2R_18_19915001 chr2R_19915001 RAL-853_125b 1456 chr2R 19957382 19957457 chr2R 19962635 19962709 copia 25 5243 4.5 4.5 4.5 4.5 5327 chr2R 19957382 intergenic CG44623 + chr2R 19960046 intergenic not near genes chr2R 19962709 intergenic not near genes chr2R_25_19960001 chr2R_19960001 RAL-853_125b 1457 chr2R 20009452 20009526 chr2R 20009581 20009655 33 127 7.5 7.0 7.2 4.0 203 chr2R 20009452 intergenic not near genes chr2R 20009554 intergenic not near genes chr2R 20009655 intergenic not near genes chr2R_33_20005001 chr2R_20005001 RAL-853_125b 1458 chr2R 20069190 20069255 chr2R 20071876 20071944 opus 20 2687 0.0 6.5 3.2 4.8 2754 chr2R 20069190 intergenic not near genes chr2R 20070567 intergenic not near genes chr2R 20071944 intergenic not near genes chr2R_20_20070001 chr2R_20070001 RAL-853_125b 1459 chr2R 20080600 20080620 chr2R 20080727 20080747 12 127 1.0 17.0 9.0 1.2 147 chr2R 20080600 intergenic not near genes chr2R 20080674 intergenic not near genes chr2R 20080747 intergenic not near genes chr2R_12_20080001 chr2R_20080001 RAL-853_125b 1460 chr2R 20125724 20125743 chr2R 20125850 20125869 13 126 4.5 12.5 8.5 1.4 145 chr2R 20125724 intergenic not near genes chr2R 20125796 intergenic not near genes chr2R 20125869 intergenic not near genes chr2R_13_20125001 chr2R_20125001 RAL-853_125b 1461 chr2R 20185275 20185287 chr2R 20185408 20185420 6 133 4.0 7.5 5.8 0.9 145 chr2R 20185275 intergenic not near genes chr2R 20185348 intergenic not near genes chr2R 20185420 intergenic not near genes chr2R_6_20185001 chr2R_20185001 RAL-853_125b 1462 chr2R 20206961 20207014 chr2R 20207084 20207133 18 118 14.0 8.0 11.0 1.5 172 chr2R 20206961 intergenic not near genes chr2R 20207047 intergenic not near genes chr2R 20207133 intergenic not near genes chr2R_18_20205001 chr2R_20205001 RAL-853_125b 1463 chr2R 20223908 20223985 chr2R 20224043 20224120 21 135 9.0 4.5 6.8 2.7 212 chr2R 20223908 intergenic not near genes chr2R 20224014 intergenic not near genes chr2R 20224120 intergenic not near genes chr2R_21_20220001 chr2R_20220001 RAL-853_125b 1464 chr2R 20265469 20265543 chr2R 20276727 20276801 40 11263 81.0 69.0 75.0 0.5 11332 chr2R 20265469 exon CG8908 + chr2R 20271135 intergenic CG8908 + chr2R 20276801 exon CG9143 - chr2R_40_20270001 chr2R_20270001 RAL-853_125b 1465 chr2R 20346617 20346686 chr2R 20346772 20346842 26 153 4.5 7.0 5.8 3.8 225 chr2R 20346617 intergenic CG16741 + chr2R 20346730 intergenic CG16741 + chr2R 20346842 intergenic CG16741 + chr2R_26_20345001 chr2R_20345001 RAL-853_125b 1466 chr2R 20368471 20368495 chr2R 20377708 20377732 roo 7 9237 6.5 8.5 7.5 0.8 9261 chr2R 20368471 intergenic not near genes chr2R 20373102 intergenic not near genes chr2R 20377732 intergenic not near genes chr2R_7_20370001 chr2R_20370001 RAL-853_125b 1467 chr2R 20379107 20379145 chr2R 20379240 20379278 4 133 11.0 0.0 5.5 0.6 171 chr2R 20379107 intergenic not near genes chr2R 20379192 intergenic not near genes chr2R 20379278 intergenic not near genes chr2R_4_20375001 chr2R_20375001 RAL-853_125b 1468 chr2R 20383170 20383200 chr2R 20383297 20383333 12 131 14.5 8.0 11.2 1.0 163 chr2R 20383170 intergenic not near genes chr2R 20383252 intergenic not near genes chr2R 20383333 intergenic not near genes chr2R_12_20380001 chr2R_20380001 RAL-853_125b 1469 chr2R 20383202 20383242 chr2R 20383296 20383365 11 119 6.5 7.5 7.0 1.4 163 chr2R 20383202 intergenic not near genes chr2R 20383284 intergenic not near genes chr2R 20383365 intergenic not near genes chr2R_11_20380001 chr2R_20380001 RAL-853_125b 1470 chr2R 20389579 20389651 chr2R 20389706 20389769 15 124 9.5 9.5 9.5 1.4 190 chr2R 20389579 intergenic not near genes chr2R 20389674 intergenic not near genes chr2R 20389769 intergenic not near genes chr2R_15_20385001 chr2R_20385001 RAL-853_125b 1471 chr2R 20395123 20395194 chr2R 20395251 20395322 20 128 10.0 6.0 8.0 2.2 199 chr2R 20395123 intergenic not near genes chr2R 20395222 intergenic not near genes chr2R 20395322 intergenic not near genes chr2R_20_20395001 chr2R_20395001 RAL-853_125b 1472 chr2R 20405036 20405094 chr2R 20405172 20405230 21 136 8.5 10.5 9.5 2.0 194 chr2R 20405036 intergenic not near genes chr2R 20405133 intergenic not near genes chr2R 20405230 intergenic not near genes chr2R_21_20405001 chr2R_20405001 RAL-853_125b 1473 chr2R 20413283 20413326 chr2R 20413417 20413443 13 132 11.0 11.5 11.2 1.1 160 chr2R 20413283 intergenic not near genes chr2R 20413363 intergenic not near genes chr2R 20413443 intergenic not near genes chr2R_13_20410001 chr2R_20410001 RAL-853_125b 1474 chr2R 20414437 20414502 chr2R 20414570 20414634 31 132 6.5 12.0 9.2 3.0 197 chr2R 20414437 intergenic not near genes chr2R 20414536 intergenic not near genes chr2R 20414634 intergenic not near genes chr2R_31_20410001 chr2R_20410001 RAL-853_125b 1475 chr2R 20432450 20432504 chr2R 20432575 20432637 21 132 13.5 5.5 9.5 2.0 187 chr2R 20432450 intron CG12484 + chr2R 20432544 intron CG12484 + chr2R 20432637 intron CG12484 + chr2R_21_20430001 chr2R_20430001 RAL-853_125b 1476 chr2R 20434045 20434103 chr2R 20434182 20434239 7 137 0.0 6.0 3.0 1.8 194 chr2R 20434045 intron CG12484 + chr2R 20434142 intron CG12484 + chr2R 20434239 intron CG12484 + chr2R_7_20430001 chr2R_20430001 RAL-853_125b 1477 chr2R 20479849 20479890 chr2R 20479965 20480016 13 125 8.0 7.5 7.8 1.5 167 chr2R 20479849 intergenic not near genes chr2R 20479932 intergenic not near genes chr2R 20480016 intergenic not near genes chr2R_13_20475001 chr2R_20475001 RAL-853_125b 1478 chr2R 20506166 20506176 chr2R 20506321 20506332 4 156 16.0 6.5 11.2 0.3 166 chr2R 20506166 3` UTR CR44644 - chr2R 20506249 3` UTR,5` UTR CR44644 -,CR44645 + chr2R 20506332 3` UTR,5` UTR CR44644 -,CR44645 + chr2R_4_20505001 chr2R_20505001 RAL-853_125b 1479 chr2R 20506180 20506195 chr2R 20506320 20506340 7 142 13.0 5.5 9.2 0.7 160 chr2R 20506180 3` UTR CR44644 - chr2R 20506260 3` UTR,5` UTR CR44644 -,CR44645 + chr2R 20506340 3` UTR,5` UTR CR44644 -,CR44645 + chr2R_7_20505001 chr2R_20505001 RAL-853_125b 1480 chr2R 20506206 20506236 chr2R 20506315 20506365 15 132 4.5 4.5 4.5 2.7 159 chr2R 20506206 3` UTR,5` UTR CR44644 -,CR44645 + chr2R 20506286 3` UTR,5` UTR CR44644 -,CR44645 + chr2R 20506365 3` UTR,5` UTR CR44644 -,CR44645 + chr2R_15_20505001 chr2R_20505001 RAL-853_125b 1481 chr2R 20506907 20506926 chr2R 20507039 20507058 6 132 0.0 2.0 1.0 3.0 151 chr2R 20506907 intergenic CR44645 + chr2R 20506982 intergenic CR44645 + chr2R 20507058 intergenic CR44645 + chr2R_6_20505001 chr2R_20505001 RAL-853_125b 1482 chr2R 20535528 20535590 chr2R 20535648 20535711 9 117 9.5 4.0 6.8 1.2 183 chr2R 20535528 3` UTR CG18067 + chr2R 20535620 3` UTR CG18067 + chr2R 20535711 3` UTR CG18067 + chr2R_9_20535001 chr2R_20535001 RAL-853_125b 1483 chr2R 20555288 20555361 chr2R 20555430 20555503 31 141 4.5 6.0 5.2 5.0 215 chr2R 20555288 intergenic not near genes chr2R 20555396 intergenic not near genes chr2R 20555503 intergenic not near genes chr2R_31_20555001 chr2R_20555001 RAL-853_125b 1484 chr2R 20572522 20572584 chr2R 20572662 20572724 17 139 5.0 6.5 5.8 2.5 202 chr2R 20572522 intron qsm - chr2R 20572623 intron qsm - chr2R 20572724 intron qsm - chr2R_17_20570001 chr2R_20570001 RAL-853_125b 1485 chr2R 20590616 20590667 chr2R 20590745 20590796 20 128 5.0 7.0 6.0 2.9 180 chr2R 20590616 intron bl + chr2R 20590706 intron bl + chr2R 20590796 intron bl + chr2R_20_20590001 chr2R_20590001 RAL-853_125b 1486 chr2R 20601668 20601755 chr2R 20601803 20601889 18 135 8.5 6.5 7.5 2.1 221 chr2R 20601668 intron bl + chr2R 20601778 intron bl + chr2R 20601889 intron bl + chr2R_18_20600001 chr2R_20600001 RAL-853_125b 1487 chr2R 20667326 20667338 chr2R 20667482 20667500 6 160 25.0 14.5 19.8 0.3 174 chr2R 20667326 intergenic Fem-1 -,exu - chr2R 20667413 intergenic exu -,Fem-1 - chr2R 20667500 3` UTR exu - chr2R_6_20665001 chr2R_20665001 RAL-853_125b 1488 chr2R 20739395 20739476 chr2R 20744213 20744258 F-element 24 4808 9.5 11.0 10.2 2.1 4863 chr2R 20739395 intron dpr + chr2R 20741826 intron dpr + chr2R 20744258 intron dpr + chr2R_24_20740001 chr2R_20740001 RAL-853_125b 1489 chr2R 20757427 20757458 chr2R 20757548 20757585 14 125 6.0 14.0 10.0 1.3 158 chr2R 20757427 intergenic not near genes chr2R 20757506 intergenic not near genes chr2R 20757585 intergenic not near genes chr2R_14_20755001 chr2R_20755001 RAL-853_125b 1490 chr2R 20761085 20761119 chr2R 20761240 20761274 12 155 2.5 0.0 1.2 5.5 189 chr2R 20761085 intergenic not near genes chr2R 20761180 intergenic not near genes chr2R 20761274 intergenic not near genes chr2R_12_20760001 chr2R_20760001 RAL-853_125b 1491 chr2R 20783262 20783314 chr2R 20788084 20788136 F-element 23 4821 7.5 4.5 6.0 3.3 4874 chr2R 20783262 intergenic not near genes chr2R 20785699 intergenic not near genes chr2R 20788136 intergenic CG43666 - chr2R_23_20785001 chr2R_20785001 RAL-853_125b 1492 chr2R 20962860 20962936 chr2R 20963008 20963084 34 146 8.5 10.5 9.5 3.2 224 chr2R 20962860 intergenic not near genes chr2R 20962972 intergenic not near genes chr2R 20963084 intergenic not near genes chr2R_34_20960001 chr2R_20960001 RAL-853_125b 1493 chr2R 20966981 20967056 chr2R 20967108 20967183 19 127 5.0 1.5 3.2 4.5 202 chr2R 20966981 intergenic not near genes chr2R 20967082 intergenic not near genes chr2R 20967183 intergenic not near genes chr2R_19_20965001 chr2R_20965001 RAL-853_125b 1494 chr2R 21079934 21079990 chr2R 21080067 21080123 28 133 7.5 5.0 6.2 3.9 189 chr2R 21079934 intron Treh + chr2R 21080028 intron Treh + chr2R 21080123 intron Treh + chr2R_28_21080001 chr2R_21080001 RAL-853_125b 1495 chr2R 21091400 21091464 chr2R 21091533 21091597 22 133 7.0 7.0 7.0 2.8 197 chr2R 21091400 intergenic Rbpn-5 - chr2R 21091498 intergenic Rbpn-5 - chr2R 21091597 intergenic not near genes chr2R_22_21090001 chr2R_21090001 RAL-853_125b 1496 chr2R 21101622 21101669 chr2R 21101761 21101807 18 136 5.0 13.0 9.0 1.8 185 chr2R 21101622 intergenic CG34396 +,ktub + chr2R 21101714 intergenic ktub +,CG34396 + chr2R 21101807 intergenic ktub +,CG34396 + chr2R_18_21100001 chr2R_21100001 RAL-853_125b 1497 chr2R 21113430 21113483 chr2R 21113569 21113622 20 138 9.5 8.5 9.0 2.0 192 chr2R 21113430 intron ktub + chr2R 21113526 intron ktub + chr2R 21113622 intron ktub + chr2R_20_21110001 chr2R_21110001 RAL-853_125b 1498 chr2R 21117423 21117493 chr2R 21117829 21117902 32 406 5.5 2.5 4.0 6.4 479 chr2R 21117423 intron ktub + chr2R 21117662 intron ktub + chr2R 21117902 intron ktub + chr2R_32_21115001 chr2R_21115001 RAL-853_125b 1499 chr2R 21151096 21151146 chr2R 21153758 21153829 opus 21 2676 1.0 7.0 4.0 4.2 2733 chr2R 21151096 intron CG30389 - chr2R 21152462 intron CG30389 - chr2R 21153829 intron CG30389 - chr2R_21_21150001 chr2R_21150001 RAL-853_125b 1500 chr2R 21188176 21188247 chr2R 21188307 21188378 22 131 9.0 10.0 9.5 2.1 202 chr2R 21188176 exon tud + chr2R 21188277 intron tud + chr2R 21188378 exon tud + chr2R_22_21185001 chr2R_21185001 RAL-853_125b 1501 chr2R 21217276 21217291 chr2R 21217413 21217418 7 136 18.0 0.0 9.0 0.7 142 chr2R 21217276 exon CG15661 - chr2R 21217347 5` UTR CG15661 - chr2R 21217418 5` UTR CG15661 - chr2R_7_21215001 chr2R_21215001 RAL-853_125b 1502 chr2R 21258460 21258490 chr2R 21258588 21258618 6 128 0.0 10.5 5.2 1.0 158 chr2R 21258460 intron Rgk3 + chr2R 21258539 intron Rgk3 + chr2R 21258618 intron Rgk3 + chr2R_6_21255001 chr2R_21255001 RAL-853_125b 1503 chr2R 21258491 21258499 chr2R 21258586 21258626 4 114 0.0 10.5 5.2 0.6 135 chr2R 21258491 intron Rgk3 + chr2R 21258558 intron Rgk3 + chr2R 21258626 intron Rgk3 + chr2R_4_21255001 chr2R_21255001 RAL-853_125b 1504 chr2R 21285382 21285436 chr2R 21285509 21285563 13 127 14.5 12.0 13.2 0.9 181 chr2R 21285382 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285472 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285563 3` UTR,3` UTR MFS16 +,CG10505 - chr2R_13_21285001 chr2R_21285001 RAL-853_125b 1505 chr2R 21381877 21381913 chr2R 21382014 21382050 5 137 16.0 11.5 13.8 0.3 173 chr2R 21381877 intergenic not near genes chr2R 21381964 intergenic not near genes chr2R 21382050 intergenic not near genes chr2R_5_21380001 chr2R_21380001 RAL-853_125b 1506 chr2R 21417227 21417236 chr2R 21417379 21417387 6 152 14.5 0.0 7.2 0.7 160 chr2R 21417227 intron Sdc - chr2R 21417307 intron Sdc - chr2R 21417387 intron Sdc - chr2R_6_21415001 chr2R_21415001 RAL-853_125b 1507 chr2R 21521716 21521763 chr2R 21521852 21521898 6 132 7.5 5.5 6.5 0.8 182 chr2R 21521716 exon CG30289 - chr2R 21521807 exon CG30289 - chr2R 21521898 intergenic CG30289 - chr2R_6_21520001 chr2R_21520001 RAL-853_125b 1508 chr2R 21540653 21540696 chr2R 21540921 21540964 17 268 5.5 3.0 4.2 3.3 311 chr2R 21540653 intron Egfr + chr2R 21540808 intron Egfr + chr2R 21540964 intron Egfr + chr2R_17_21540001 chr2R_21540001 RAL-853_125b 1509 chr2R 21546739 21546812 chr2R 21546870 21546943 13 122 17.5 12.5 15.0 0.8 204 chr2R 21546739 intron Egfr + chr2R 21546841 intron Egfr + chr2R 21546943 intron Egfr + chr2R_13_21545001 chr2R_21545001 RAL-853_125b 1510 chr2R 21571089 21571154 chr2R 21571216 21571281 23 125 17.0 18.0 17.5 1.2 192 chr2R 21571089 intron CG10440 - chr2R 21571185 intron CG10440 - chr2R 21571281 intron CG10440 - chr2R_23_21570001 chr2R_21570001 RAL-853_125b 1511 chr2R 21592811 21592828 chr2R 21592935 21592936 5 124 16.0 16.5 16.2 0.3 125 chr2R 21592811 intergenic not near genes chr2R 21592874 intergenic not near genes chr2R 21592936 intergenic not near genes chr2R_5_21590001 chr2R_21590001 RAL-853_125b 1512 chr2R 21592833 21592853 chr2R 21592930 21592958 4 106 11.5 14.5 13.0 0.3 125 chr2R 21592833 intergenic not near genes chr2R 21592896 intergenic not near genes chr2R 21592958 intergenic not near genes chr2R_4_21590001 chr2R_21590001 RAL-853_125b 1513 chr2R 21605870 21605951 chr2R 21606004 21606085 30 133 7.5 6.0 6.8 3.8 215 chr2R 21605870 3` UTR CG10433 - chr2R 21605978 3` UTR CG10433 - chr2R 21606085 exon CG10433 - chr2R_30_21605001 chr2R_21605001 RAL-853_125b 1514 chr2R 21700110 21700184 chr2R 21700246 21700263 38 131 12.0 10.5 11.2 3.1 153 chr2R 21700110 intron HmgZ - chr2R 21700186 intron HmgZ - chr2R 21700263 intron HmgZ - chr2R_38_21700001 chr2R_21700001 RAL-853_125b 1515 chr2R 21738233 21738307 chr2R 21747443 21747481 roo 12 9197 4.0 7.0 5.5 1.8 9248 chr2R 21738233 intergenic not near genes chr2R 21742857 intergenic not near genes chr2R 21747481 intergenic not near genes chr2R_12_21740001 chr2R_21740001 RAL-853_125b 1516 chr2R 21753040 21753110 chr2R 21753575 21753645 roo 31 534 8.5 12.0 10.2 2.8 605 chr2R 21753040 intergenic not near genes chr2R 21753342 intergenic not near genes chr2R 21753645 intergenic not near genes chr2R_31_21750001 chr2R_21750001 RAL-853_125b 1517 chr2R 21754623 21754691 chr2R 21754763 21754837 8 144 0.0 5.0 2.5 2.3 214 chr2R 21754623 intergenic not near genes chr2R 21754730 intergenic not near genes chr2R 21754837 intergenic not near genes chr2R_8_21750001 chr2R_21750001 RAL-853_125b 1518 chr2R 21783535 21783573 chr2R 21783662 21783695 14 127 7.5 2.5 5.0 2.3 160 chr2R 21783535 intergenic not near genes chr2R 21783615 intergenic not near genes chr2R 21783695 intergenic not near genes chr2R_14_21780001 chr2R_21780001 RAL-853_125b 1519 chr2R 21802423 21802448 chr2R 21802564 21802589 15 141 5.5 21.0 13.2 1.1 166 chr2R 21802423 intergenic not near genes chr2R 21802506 intergenic not near genes chr2R 21802589 intergenic not near genes chr2R_15_21800001 chr2R_21800001 RAL-853_125b 1520 chr2R 21809473 21809512 chr2R 21817763 21817802 roo 22 8290 7.5 6.5 7.0 2.8 8329 chr2R 21809473 intergenic not near genes chr2R 21813638 intergenic not near genes chr2R 21817802 intergenic not near genes chr2R_22_21810001 chr2R_21810001 RAL-853_125b 1521 chr2R 21852874 21852935 chr2R 21853010 21853066 34 145 6.0 6.5 6.2 4.7 192 chr2R 21852874 intergenic not near genes chr2R 21852970 intergenic not near genes chr2R 21853066 intergenic not near genes chr2R_34_21850001 chr2R_21850001 RAL-853_125b 1522 chr2R 21860858 21860878 chr2R 21860985 21861005 4 127 15.0 11.5 13.2 0.3 147 chr2R 21860858 exon CG9294 + chr2R 21860932 exon CG9294 + chr2R 21861005 exon CG9294 + chr2R_4_21860001 chr2R_21860001 RAL-853_125b 1523 chr2R 21878485 21878563 chr2R 21878621 21878699 26 136 6.5 6.5 6.5 3.5 214 chr2R 21878485 intron Fili + chr2R 21878592 intron Fili + chr2R 21878699 intron Fili + chr2R_26_21875001 chr2R_21875001 RAL-853_125b 1524 chr2R 21906222 21906301 chr2R 21906373 21906452 22 151 5.0 6.0 5.5 3.4 230 chr2R 21906222 intron Fili + chr2R 21906337 intron Fili + chr2R 21906452 intron Fili + chr2R_22_21905001 chr2R_21905001 RAL-853_125b 1525 chr2R 21912699 21912721 chr2R 21912829 21912852 7 131 13.5 6.0 9.8 0.6 153 chr2R 21912699 intron Fili + chr2R 21912776 intron Fili + chr2R 21912852 intron Fili + chr2R_7_21910001 chr2R_21910001 RAL-853_125b 1526 chr2R 21912723 21912775 chr2R 21912828 21912905 23 124 5.5 5.5 5.5 3.5 182 chr2R 21912723 intron Fili + chr2R 21912814 intron Fili + chr2R 21912905 intron Fili + chr2R_23_21910001 chr2R_21910001 RAL-853_125b 1527 chr2R 21914307 21914321 chr2R 21914444 21914458 6 137 3.5 4.0 3.8 1.2 151 chr2R 21914307 intron Fili + chr2R 21914382 intron Fili + chr2R 21914458 intron Fili + chr2R_6_21910001 chr2R_21910001 RAL-853_125b 1528 chr2R 22003052 22003112 chr2R 22003188 22003248 16 129 9.5 0.0 4.8 2.8 196 chr2R 22003052 intron CG34370 - chr2R 22003150 intron CG34370 - chr2R 22003248 intron CG34370 - chr2R_16_22000001 chr2R_22000001 RAL-853_125b 1529 chr2R 22012946 22013010 chr2R 22013091 22013155 17 145 6.5 6.0 6.2 2.4 209 chr2R 22012946 intron CG34370 - chr2R 22013050 intron CG34370 - chr2R 22013155 intron CG34370 - chr2R_17_22010001 chr2R_22010001 RAL-853_125b 1530 chr2R 22017365 22017415 chr2R 22018745 22018795 15 1380 37.5 11.0 24.2 0.6 1430 chr2R 22017365 intron CG34370 - chr2R 22018080 intron CG34370 - chr2R 22018795 intron CG34370 - chr2R_15_22015001 chr2R_22015001 RAL-853_125b 1531 chr2R 22017258 22017321 chr2R 22018627 22018690 24 1370 48.0 17.0 32.5 0.7 1432 chr2R 22017258 intron CG34370 - chr2R 22017974 intron CG34370 - chr2R 22018690 intron CG34370 - chr2R_24_22015001 chr2R_22015001 RAL-853_125b 1532 chr2R 22029485 22029531 chr2R 22029613 22029639 16 127 6.0 0.5 3.2 3.8 154 chr2R 22029485 intron CG34370 - chr2R 22029562 intron CG34370 - chr2R 22029639 intron CG34370 - chr2R_16_22025001 chr2R_22025001 RAL-853_125b 1533 chr2R 22035500 22035568 chr2R 22035637 22035705 27 136 9.5 10.0 9.8 2.5 205 chr2R 22035500 intron,exon CG34370 -,CG9308 + chr2R 22035602 intron,3` UTR CG34370 -,CG9308 + chr2R 22035705 intron CG34370 - chr2R_27_22035001 chr2R_22035001 RAL-853_125b 1534 chr2R 22120774 22120807 chr2R 22121026 22121059 13 252 0.0 5.0 2.5 3.7 285 chr2R 22120774 intron Vrp1 - chr2R 22120916 intron Vrp1 - chr2R 22121059 intron Vrp1 - chr2R_13_22120001 chr2R_22120001 RAL-853_125b 1535 chr2R 22132241 22132286 chr2R 22132371 22132416 19 130 9.5 5.5 7.5 2.2 175 chr2R 22132241 intergenic not near genes chr2R 22132328 intergenic not near genes chr2R 22132416 intergenic not near genes chr2R_19_22130001 chr2R_22130001 RAL-853_125b 1536 chr2R 22135421 22135468 chr2R 22135569 22135611 22 148 11.0 9.0 10.0 2.0 190 chr2R 22135421 intergenic not near genes chr2R 22135516 intergenic not near genes chr2R 22135611 intergenic not near genes chr2R_22_22135001 chr2R_22135001 RAL-853_125b 1537 chr2R 22161669 22161738 chr2R 22161860 22161929 21 191 7.5 7.5 7.5 2.5 260 chr2R 22161669 intron a + chr2R 22161799 intron a + chr2R 22161929 intron a + chr2R_21_22160001 chr2R_22160001 RAL-853_125b 1538 chr2R 22182861 22182935 chr2R 22182995 22183069 16 134 3.5 5.0 4.2 3.1 208 chr2R 22182861 5` UTR CG11170 - chr2R 22182965 intergenic CG11170 -,MED16 +,CG11275 + chr2R 22183069 intergenic MED16 +,CG11170 -,CG11275 + chr2R_16_22180001 chr2R_22180001 RAL-853_125b 1539 chr2R 22248804 22248818 chr2R 22248931 22248945 7 126 29.5 19.5 24.5 0.3 141 chr2R 22248804 intron dve + chr2R 22248874 intron dve + chr2R 22248945 intron dve + chr2R_7_22245001 chr2R_22245001 RAL-853_125b 1540 chr2R 22248822 22248871 chr2R 22248921 22248989 19 122 25.0 20.0 22.5 0.8 167 chr2R 22248822 intron dve + chr2R 22248906 intron dve + chr2R 22248989 intron dve + chr2R_19_22245001 chr2R_22245001 RAL-853_125b 1541 chr2R 22259601 22259610 chr2R 22259732 22259741 5 130 24.5 28.5 26.5 0.2 140 chr2R 22259601 intron dve + chr2R 22259671 intron dve + chr2R 22259741 intron dve + chr2R_5_22255001 chr2R_22255001 RAL-853_125b 1542 chr2R 22290033 22290045 chr2R 22290167 22290179 5 134 15.0 3.5 9.2 0.5 146 chr2R 22290033 intergenic not near genes chr2R 22290106 intergenic not near genes chr2R 22290179 intergenic not near genes chr2R_5_22290001 chr2R_22290001 RAL-853_125b 1543 chr2R 22349655 22349708 chr2R 22351489 22351542 jockey 14 1834 14.0 7.0 10.5 1.2 1887 chr2R 22349655 intron Liprin-gamma - chr2R 22350598 intron Liprin-gamma - chr2R 22351542 intron Liprin-gamma - chr2R_14_22350001 chr2R_22350001 RAL-853_125b 1544 chr2R 22360339 22360376 chr2R 22360822 22360826 jockey 5 476 14.5 6.0 10.2 0.4 487 chr2R 22360339 intron Liprin-gamma - chr2R 22360582 intron Liprin-gamma - chr2R 22360826 intron Liprin-gamma - chr2R_5_22360001 chr2R_22360001 RAL-853_125b 1545 chr2R 22361683 22361738 chr2R 22361838 22361893 5 151 33.0 36.5 34.8 0.1 210 chr2R 22361683 intron Liprin-gamma - chr2R 22361788 intron Liprin-gamma - chr2R 22361893 intron Liprin-gamma - chr2R_5_22360001 chr2R_22360001 RAL-853_125b 1546 chr2R 22368560 22368609 chr2R 22368701 22368750 13 135 24.5 23.5 24.0 0.5 190 chr2R 22368560 intron Liprin-gamma - chr2R 22368655 intron Liprin-gamma - chr2R 22368750 intron Liprin-gamma - chr2R_13_22365001 chr2R_22365001 RAL-853_125b 1547 chr2R 22374594 22374638 chr2R 22374731 22374775 19 136 5.0 5.0 5.0 3.2 181 chr2R 22374594 3` UTR CR44759 - chr2R 22374684 3` UTR CR44759 - chr2R 22374775 3` UTR CR44759 - chr2R_19_22370001 chr2R_22370001 RAL-853_125b 1548 chr2R 22382847 22382887 chr2R 22382978 22383018 10 127 18.5 17.0 17.8 0.5 171 chr2R 22382847 intergenic wrapper +,CG13506 + chr2R 22382932 intergenic CG13506 +,wrapper + chr2R 22383018 intergenic CG13506 +,wrapper + chr2R_10_22380001 chr2R_22380001 RAL-853_125b 1549 chr2R 22411455 22411502 chr2R 22411583 22411630 8 127 16.0 14.0 15.0 0.5 175 chr2R 22411455 5` UTR qkr58E-3 - chr2R 22411542 5` UTR qkr58E-3 - chr2R 22411630 intergenic qkr58E-3 -,Mes4 + chr2R_8_22410001 chr2R_22410001 RAL-853_125b 1550 chr2R 22441074 22441131 chr2R 22441197 22441247 11 126 32.0 30.5 31.2 0.3 173 chr2R 22441074 intergenic not near genes chr2R 22441160 intergenic not near genes chr2R 22441247 intergenic not near genes chr2R_11_22440001 chr2R_22440001 RAL-853_125b 1551 chr2R 22460330 22460403 chr2R 22460459 22460532 15 128 18.5 17.0 17.8 0.8 202 chr2R 22460330 intron CG10384 + chr2R 22460431 intron CG10384 + chr2R 22460532 intron CG10384 + chr2R_15_22460001 chr2R_22460001 RAL-853_125b 1552 chr2R 22503750 22503881 chr2R 22503897 22504026 12 146 6.5 6.5 6.5 1.6 276 chr2R 22503750 intron px - chr2R 22503888 intron px - chr2R 22504026 intron px - chr2R_12_22500001 chr2R_22500001 RAL-853_125b 1553 chr2R 22525710 22525772 chr2R 22529310 22529377 jockey 24 3602 10.5 6.0 8.2 2.6 3667 chr2R 22525710 intron px - chr2R 22527544 intron px - chr2R 22529377 intron px - chr2R_24_22525001 chr2R_22525001 RAL-853_125b 1554 chr2R 22539571 22539634 chr2R 22539696 22539765 13 128 27.5 28.5 28.0 0.4 194 chr2R 22539571 intron px - chr2R 22539668 intron px - chr2R 22539765 intron px - chr2R_13_22535001 chr2R_22535001 RAL-853_125b 1555 chr2R 22540890 22540966 chr2R 22541019 22541095 11 127 16.0 15.0 15.5 0.7 205 chr2R 22540890 exon px - chr2R 22540992 intron px - chr2R 22541095 intron px - chr2R_11_22540001 chr2R_22540001 RAL-853_125b 1556 chr2R 22575624 22575674 chr2R 22575753 22575757 4 118 15.5 20.5 18.0 0.2 133 chr2R 22575624 intron dnr1 - chr2R 22575690 intron dnr1 - chr2R 22575757 intron dnr1 - chr2R_4_22575001 chr2R_22575001 RAL-853_125b 1557 chr2R 22575676 22575678 chr2R 22575738 22575741 6 87 17.0 18.0 17.5 0.3 65 chr2R 22575676 intron dnr1 - chr2R 22575708 intron dnr1 - chr2R 22575741 intron dnr1 - chr2R_6_22575001 chr2R_22575001 RAL-853_125b 1558 chr2R 22577057 22577091 chr2R 22577173 22577221 8 127 22.5 16.5 19.5 0.4 164 chr2R 22577057 intron dnr1 - chr2R 22577139 intron dnr1 - chr2R 22577221 intron dnr1 - chr2R_8_22575001 chr2R_22575001 RAL-853_125b 1559 chr2R 22580387 22580442 chr2R 22586581 22586636 diver 18 6194 8.5 6.0 7.2 2.2 6249 chr2R 22580387 intron dnr1 - chr2R 22583512 intron dnr1 - chr2R 22586636 intron dnr1 - chr2R_18_22580001 chr2R_22580001 RAL-853_125b 1560 chr2R 22588111 22588129 chr2R 22588251 22588274 6 141 14.5 8.5 11.5 0.5 163 chr2R 22588111 intron dnr1 - chr2R 22588192 intron dnr1 - chr2R 22588274 intron dnr1 - chr2R_6_22585001 chr2R_22585001 RAL-853_125b 1561 chr2R 22588130 22588153 chr2R 22588246 22588283 10 130 8.5 7.5 8.0 1.1 153 chr2R 22588130 intron dnr1 - chr2R 22588206 intron dnr1 - chr2R 22588283 intron dnr1 - chr2R_10_22585001 chr2R_22585001 RAL-853_125b 1562 chr2R 22599123 22599184 chr2R 22599258 22599327 15 142 24.5 23.5 24.0 0.6 204 chr2R 22599123 intron CG4269 + chr2R 22599225 intron CG4269 + chr2R 22599327 intron CG4269 + chr2R_15_22595001 chr2R_22595001 RAL-853_125b 1563 chr2R 22605893 22605928 chr2R 22606013 22606063 8 133 19.5 19.5 19.5 0.4 170 chr2R 22605893 intron RpS16 + chr2R 22605978 intron RpS16 + chr2R 22606063 5` UTR RpS16 + chr2R_8_22605001 chr2R_22605001 RAL-853_125b 1564 chr2R 22620786 22620850 chr2R 22620935 22621000 15 147 18.5 20.5 19.5 0.7 214 chr2R 22620786 5` UTR CG33143 + chr2R 22620893 5` UTR CG33143 + chr2R 22621000 5` UTR CG33143 + chr2R_15_22620001 chr2R_22620001 RAL-853_125b 1565 chr2R 22623417 22623444 chr2R 22623607 22623629 5 188 15.5 14.0 14.8 0.3 212 chr2R 22623417 intron CG33143 + chr2R 22623523 intron CG33143 + chr2R 22623629 intron CG33143 + chr2R_5_22620001 chr2R_22620001 RAL-853_125b 1566 chr2R 22623447 22623477 chr2R 22623597 22623660 6 180 12.5 11.0 11.8 0.5 213 chr2R 22623447 intron CG33143 + chr2R 22623554 intron CG33143 + chr2R 22623660 intron CG33143 + chr2R_6_22620001 chr2R_22620001 RAL-853_125b 1567 chr2R 22629368 22629386 chr2R 22629479 22629513 4 116 23.0 22.5 22.8 0.2 145 chr2R 22629368 intron CG33143 + chr2R 22629440 intron CG33143 + chr2R 22629513 intron CG33143 + chr2R_4_22625001 chr2R_22625001 RAL-853_125b 1568 chr2R 22646422 22646436 chr2R 22646564 22646578 10 142 16.0 0.0 8.0 1.1 156 chr2R 22646422 intergenic CG2852 -,CG30195 - chr2R 22646500 intergenic CG30195 -,CG2852 - chr2R 22646578 intergenic CG30195 -,CG2852 - chr2R_10_22645001 chr2R_22645001 RAL-853_125b 1569 chr2R 22654332 22654394 chr2R 22654463 22654520 9 130 21.5 26.5 24.0 0.4 188 chr2R 22654332 exon Cyp6d2 - chr2R 22654426 5` UTR Cyp6d2 - chr2R 22654520 5` UTR Cyp6d2 - chr2R_9_22650001 chr2R_22650001 RAL-853_125b 1570 chr2R 22666739 22666771 chr2R 22666865 22666897 9 126 13.0 13.5 13.2 0.6 158 chr2R 22666739 5` UTR CR42868 + chr2R 22666818 intergenic CR42868 +,CR45269 -,CG30273 + chr2R 22666897 intergenic CR42868 +,CG30273 +,CR45269 - chr2R_9_22665001 chr2R_22665001 RAL-853_125b 1571 chr2R 22729410 22729465 chr2R 22729667 22729723 INE-1 13 258 22.5 24.0 23.2 0.5 313 chr2R 22729410 intron jbug - chr2R 22729566 intron jbug - chr2R 22729723 intron jbug - chr2R_13_22725001 chr2R_22725001 RAL-853_125b 1572 chr2R 22756512 22756623 chr2R 22756638 22756746 24 126 14.5 15.5 15.0 1.5 234 chr2R 22756512 intron,5` UTR CG42260 -,CR30267 + chr2R 22756629 intron,intron CG42260 -,CR30267 + chr2R 22756746 intron,intron CG42260 -,CR30267 + chr2R_24_22755001 chr2R_22755001 RAL-853_125b 1573 chr2R 22763126 22763181 chr2R 22763699 22763754 13 573 17.5 25.5 21.5 0.6 628 chr2R 22763126 intron CG42260 - chr2R 22763440 intron CG42260 - chr2R 22763754 intron,5` UTR CG42260 -,CG13527 + chr2R_13_22760001 chr2R_22760001 RAL-853_125b 1574 chr2R 22772531 22772610 chr2R 22772810 22772889 9 272 18.5 16.5 17.5 0.5 358 chr2R 22772531 intron CG42260 - chr2R 22772710 intron CG42260 - chr2R 22772889 intron CG42260 - chr2R_9_22770001 chr2R_22770001 RAL-853_125b 1575 chr2R 22773389 22773443 chr2R 22773551 22773599 13 161 18.0 27.0 22.5 0.6 210 chr2R 22773389 intron CG42260 - chr2R 22773494 intron CG42260 - chr2R 22773599 intron CG42260 - chr2R_13_22770001 chr2R_22770001 RAL-853_125b 1576 chr2R 22774919 22774987 chr2R 22775388 22775456 jockey 29 468 10.0 7.5 8.8 3.0 537 chr2R 22774919 intron CG42260 - chr2R 22775188 intron CG42260 - chr2R 22775456 intron CG42260 - chr2R_29_22775001 chr2R_22775001 RAL-853_125b 1577 chr2R 22785684 22785754 chr2R 22785812 22785882 11 128 5.5 6.0 5.8 1.6 198 chr2R 22785684 intron CG42260 - chr2R 22785783 intron CG42260 - chr2R 22785882 intron CG42260 - chr2R_11_22785001 chr2R_22785001 RAL-853_125b 1578 chr2R 22787549 22787586 chr2R 22787732 22787769 8 182 14.0 3.0 8.5 0.8 220 chr2R 22787549 intron CG42260 - chr2R 22787659 intron CG42260 - chr2R 22787769 intron CG42260 - chr2R_8_22785001 chr2R_22785001 RAL-853_125b 1579 chr2R 22839446 22839525 chr2R 22839575 22839659 14 132 20.5 16.5 18.5 0.7 213 chr2R 22839446 intergenic CG9825 + chr2R 22839552 intergenic CG9825 + chr2R 22839659 intergenic CG9825 + chr2R_14_22835001 chr2R_22835001 RAL-853_125b 1580 chr2R 22843005 22843037 chr2R 22845016 22845049 flea 9 2012 11.0 13.5 12.2 0.7 2044 chr2R 22843005 intergenic CG9826 + chr2R 22844027 intergenic not near genes chr2R 22845049 intergenic not near genes chr2R_9_22840001 chr2R_22840001 RAL-853_125b 1581 chr2R 22860727 22860775 chr2R 22860868 22860916 7 141 19.0 5.0 12.0 0.5 189 chr2R 22860727 intergenic not near genes chr2R 22860822 intergenic not near genes chr2R 22860916 intergenic not near genes chr2R_7_22860001 chr2R_22860001 RAL-853_125b 1582 chr2R 22907368 22907425 chr2R 22907500 22907532 13 132 31.5 25.5 28.5 0.4 164 chr2R 22907368 intron nahoda + chr2R 22907450 intron nahoda + chr2R 22907532 intron nahoda + chr2R_13_22905001 chr2R_22905001 RAL-853_125b 1583 chr2R 22908438 22908456 chr2R 22908564 22908582 8 125 6.5 5.5 6.0 1.1 144 chr2R 22908438 intron nahoda + chr2R 22908510 intron nahoda + chr2R 22908582 intron nahoda + chr2R_8_22905001 chr2R_22905001 RAL-853_125b 1584 chr2R 22957002 22957061 chr2R 22957131 22957190 18 129 7.0 10.0 8.5 1.9 188 chr2R 22957002 intergenic CR44780 - chr2R 22957096 intergenic CR44780 - chr2R 22957190 3` UTR CR44780 - chr2R_18_22955001 chr2R_22955001 RAL-853_125b 1585 chr2R 22978236 22978275 chr2R 22978364 22978403 7 128 22.0 18.0 20.0 0.3 167 chr2R 22978236 intergenic not near genes chr2R 22978320 intergenic not near genes chr2R 22978403 intergenic not near genes chr2R_7_22975001 chr2R_22975001 RAL-853_125b 1586 chr2R 22988266 22988321 chr2R 22988392 22988452 14 130 11.5 10.5 11.0 1.2 186 chr2R 22988266 intron twi + chr2R 22988359 intron twi + chr2R 22988452 intron twi + chr2R_14_22985001 chr2R_22985001 RAL-853_125b 1587 chr2R 22993382 22993445 chr2R 22993606 22993669 14 224 17.5 27.5 22.5 0.6 287 chr2R 22993382 intron twi + chr2R 22993526 intron twi + chr2R 22993669 intron,3` UTR twi +,CG9896 - chr2R_14_22990001 chr2R_22990001 RAL-853_125b 1588 chr2R 23024343 23024371 chr2R 23024461 23024502 4 126 10.5 20.0 15.2 0.2 159 chr2R 23024343 intron,intron twi +,CG42741 - chr2R 23024422 intron,intron twi +,CG42741 - chr2R 23024502 intron,intron twi +,CG42741 - chr2R_4_23020001 chr2R_23020001 RAL-853_125b 1589 chr2R 23029567 23029585 chr2R 23029694 23029712 5 127 27.5 15.5 21.5 0.2 145 chr2R 23029567 intron,intron twi +,CG42741 - chr2R 23029640 intron,intron twi +,CG42741 - chr2R 23029712 intron,intron twi +,CG42741 - chr2R_5_23025001 chr2R_23025001 RAL-853_125b 1590 chr2R 23052607 23052676 chr2R 23052733 23052802 28 126 15.5 12.5 14.0 1.9 195 chr2R 23052607 intergenic not near genes chr2R 23052704 intergenic not near genes chr2R 23052802 intergenic not near genes chr2R_28_23050001 chr2R_23050001 RAL-853_125b 1591 chr2R 23061722 23061787 chr2R 23061866 23061931 27 141 0.5 9.0 4.8 4.7 209 chr2R 23061722 3` UTR l(2)06496 - chr2R 23061826 3` UTR l(2)06496 - chr2R 23061931 3` UTR l(2)06496 - chr2R_27_23060001 chr2R_23060001 RAL-853_125b 1592 chr2R 23122865 23122925 chr2R 23122994 23123057 8 131 23.5 21.0 22.2 0.3 192 chr2R 23122865 intergenic not near genes chr2R 23122961 intergenic not near genes chr2R 23123057 intergenic not near genes chr2R_8_23120001 chr2R_23120001 RAL-853_125b 1593 chr2R 23155660 23155865 chr2R 23155817 23155986 14 141 23.0 20.0 21.5 0.6 326 chr2R 23155660 intron CG9899 + chr2R 23155823 intron CG9899 + chr2R 23155986 intron CG9899 + chr2R_14_23155001 chr2R_23155001 RAL-853_125b 1594 chr2R 23158301 23158355 chr2R 23158428 23158462 13 123 29.0 28.0 28.5 0.4 161 chr2R 23158301 intron CG9899 + chr2R 23158382 intron CG9899 + chr2R 23158462 intron CG9899 + chr2R_13_23155001 chr2R_23155001 RAL-853_125b 1595 chr2R 23174987 23175060 chr2R 23175114 23175171 25 123 5.0 10.0 7.5 2.9 184 chr2R 23174987 intron CG34371 - chr2R 23175079 intron CG34371 - chr2R 23175171 intron CG34371 - chr2R_25_23175001 chr2R_23175001 RAL-853_125b 1596 chr2R 23188545 23188577 chr2R 23188673 23188705 6 128 11.5 16.0 13.8 0.4 160 chr2R 23188545 intron CG34371 - chr2R 23188625 intron CG34371 - chr2R 23188705 intron CG34371 - chr2R_6_23185001 chr2R_23185001 RAL-853_125b 1597 chr2R 23207813 23207854 chr2R 23207942 23207983 10 125 16.5 12.0 14.2 0.7 170 chr2R 23207813 intergenic not near genes chr2R 23207898 intergenic not near genes chr2R 23207983 intergenic not near genes chr2R_10_23205001 chr2R_23205001 RAL-853_125b 1598 chr2R 23236777 23236851 chr2R 23236914 23236995 7 143 15.5 15.0 15.2 0.4 218 chr2R 23236777 intergenic not near genes chr2R 23236886 intergenic not near genes chr2R 23236995 intergenic not near genes chr2R_7_23235001 chr2R_23235001 RAL-853_125b 1599 chr2R 23243159 23243232 chr2R 23243285 23243358 11 126 21.0 13.0 17.0 0.6 199 chr2R 23243159 intergenic not near genes chr2R 23243258 intergenic not near genes chr2R 23243358 intergenic not near genes chr2R_11_23240001 chr2R_23240001 RAL-853_125b 1600 chr2R 23287788 23287841 chr2R 23287916 23287969 14 126 16.5 19.0 17.8 0.7 181 chr2R 23287788 intergenic not near genes chr2R 23287878 intergenic not near genes chr2R 23287969 intergenic not near genes chr2R_14_23285001 chr2R_23285001 RAL-853_125b 1601 chr2R 23291279 23291340 chr2R 23291407 23291468 12 126 15.0 16.0 15.5 0.7 189 chr2R 23291279 3` UTR CR44783 - chr2R 23291374 3` UTR CR44783 - chr2R 23291468 intergenic CR44783 - chr2R_12_23290001 chr2R_23290001 RAL-853_125b 1602 chr2R 23291786 23291813 chr2R 23291890 23291962 6 137 20.5 19.0 19.8 0.3 176 chr2R 23291786 intergenic CR44783 - chr2R 23291874 intergenic CR44783 - chr2R 23291962 intergenic not near genes chr2R_6_23290001 chr2R_23290001 RAL-853_125b 1603 chr2R 23338689 23338714 chr2R 23338875 23338900 7 186 24.0 8.5 16.2 0.4 211 chr2R 23338689 intergenic not near genes chr2R 23338794 intergenic not near genes chr2R 23338900 intergenic not near genes chr2R_7_23335001 chr2R_23335001 RAL-853_125b 1604 chr2R 23341230 23341283 chr2R 23343222 23343269 8 1986 27.0 25.5 26.2 0.3 2039 chr2R 23341230 intergenic not near genes chr2R 23342250 intergenic not near genes chr2R 23343269 intergenic CG3502 - chr2R_8_23340001 chr2R_23340001 RAL-853_125b 1605 chr2R 23341285 23341302 chr2R 23343220 23343285 5 1963 23.5 25.5 24.5 0.2 2000 chr2R 23341285 intergenic not near genes chr2R 23342285 intergenic not near genes chr2R 23343285 intergenic CG3502 - chr2R_5_23340001 chr2R_23340001 RAL-853_125b 1606 chr2R 23356231 23356308 chr2R 23356370 23356425 34 137 9.0 12.5 10.8 2.9 194 chr2R 23356231 3` UTR Rpi + chr2R 23356328 3` UTR Rpi + chr2R 23356425 3` UTR,3` UTR Rpi +,CG3500 - chr2R_34_23355001 chr2R_23355001 RAL-853_125b 1607 chr2R 23368773 23368843 chr2R 23368939 23369009 12 166 26.0 24.5 25.2 0.5 236 chr2R 23368773 exon Ice1 + chr2R 23368891 exon Ice1 + chr2R 23369009 exon Ice1 + chr2R_12_23365001 chr2R_23365001 RAL-853_125b 1608 chr2R 23392237 23392301 chr2R 23392393 23392435 14 149 22.0 22.0 22.0 0.6 198 chr2R 23392237 intron CG3530 - chr2R 23392336 intron CG3530 - chr2R 23392435 intron CG3530 - chr2R_14_23390001 chr2R_23390001 RAL-853_125b 1609 chr2R 23402567 23402584 chr2R 23407693 23407710 flea 10 5126 9.0 12.5 10.8 0.8 5143 chr2R 23402567 intergenic CG3520 - chr2R 23405138 intergenic not near genes chr2R 23407710 intergenic not near genes chr2R_10_23405001 chr2R_23405001 RAL-853_125b 1610 chr2R 23402588 23402632 chr2R 23407685 23407758 flea 12 5119 5.0 11.5 8.2 1.3 5170 chr2R 23402588 intergenic CG3520 - chr2R 23405173 intergenic not near genes chr2R 23407758 intergenic not near genes chr2R_12_23405001 chr2R_23405001 RAL-853_125b 1611 chr2R 23432974 23433056 chr2R 23433102 23433184 17 125 23.0 24.0 23.5 0.7 210 chr2R 23432974 intron CG9815 - chr2R 23433079 intron CG9815 - chr2R 23433184 intron CG9815 - chr2R_17_23430001 chr2R_23430001 RAL-853_125b 1612 chr2R 23437195 23437233 chr2R 23437317 23437338 18 116 6.5 15.0 10.8 1.5 143 chr2R 23437195 intergenic not near genes chr2R 23437266 intergenic not near genes chr2R 23437338 intergenic not near genes chr2R_18_23435001 chr2R_23435001 RAL-853_125b 1613 chr2R 23448760 23448807 chr2R 23448909 23448962 10 152 22.0 24.0 23.0 0.4 202 chr2R 23448760 intron CG43795 + chr2R 23448861 intron CG43795 + chr2R 23448962 intron CG43795 + chr2R_10_23445001 chr2R_23445001 RAL-853_125b 1614 chr2R 23461122 23461139 chr2R 23461233 23461266 4 120 20.0 17.5 18.8 0.2 144 chr2R 23461122 intron CG43795 + chr2R 23461194 intron CG43795 + chr2R 23461266 intron CG43795 + chr2R_4_23460001 chr2R_23460001 RAL-853_125b 1615 chr2R 23463338 23463402 chr2R 23463467 23463531 12 128 22.5 20.0 21.2 0.5 193 chr2R 23463338 intron CG43795 + chr2R 23463434 intron CG43795 + chr2R 23463531 intron CG43795 + chr2R_12_23460001 chr2R_23460001 RAL-853_125b 1616 chr2R 23467509 23467526 chr2R 23467909 23467926 6 400 17.0 11.0 14.0 0.4 417 chr2R 23467509 intron CG43795 + chr2R 23467718 intron CG43795 + chr2R 23467926 intron CG43795 + chr2R_6_23465001 chr2R_23465001 RAL-853_125b 1617 chr2R 23467544 23467585 chr2R 23467718 23467723 12 318 6.5 2.0 4.2 2.3 179 chr2R 23467544 intron CG43795 + chr2R 23467634 intron CG43795 + chr2R 23467723 intron CG43795 + chr2R_12_23465001 chr2R_23465001 RAL-853_125b 1618 chr2R 23487398 23487476 chr2R 23487530 23487608 16 132 22.0 19.0 20.5 0.7 210 chr2R 23487398 intron CG43795 + chr2R 23487503 intron CG43795 + chr2R 23487608 intron CG43795 + chr2R_16_23485001 chr2R_23485001 RAL-853_125b 1619 chr2R 23508874 23508939 chr2R 23509041 23509105 26 166 5.0 6.5 5.8 3.8 231 chr2R 23508874 intergenic not near genes chr2R 23508990 intergenic not near genes chr2R 23509105 intergenic not near genes chr2R_26_23505001 chr2R_23505001 RAL-853_125b 1620 chr2R 23518149 23518220 chr2R 23518277 23518354 22 130 9.0 4.5 6.8 2.8 205 chr2R 23518149 intergenic not near genes chr2R 23518252 intergenic not near genes chr2R 23518354 intergenic not near genes chr2R_22_23515001 chr2R_23515001 RAL-853_125b 1621 chr2R 23529530 23529545 chr2R 23537156 23537171 412 9 7625 21.5 11.0 16.2 0.5 7641 chr2R 23529530 exon bw - chr2R 23533350 intron bw - chr2R 23537171 exon bw - chr2R_9_23530001 chr2R_23530001 RAL-853_125b 1622 chr2R 23529551 23529599 chr2R 23537148 23537220 412 26 7614 9.0 9.5 9.2 2.5 7669 chr2R 23529551 intron bw - chr2R 23533386 intron bw - chr2R 23537220 exon bw - chr2R_26_23530001 chr2R_23530001 RAL-853_125b 1623 chr2R 23553695 23553727 chr2R 23553835 23553867 5 140 7.0 20.5 13.8 0.3 172 chr2R 23553695 intron pita - chr2R 23553781 intron pita - chr2R 23553867 intron pita - chr2R_5_23550001 chr2R_23550001 RAL-853_125b 1624 chr2R 23588048 23588073 chr2R 23588176 23588201 10 125 6.5 7.5 7.0 1.2 153 chr2R 23588048 intron apt + chr2R 23588124 intron apt + chr2R 23588201 intron apt + chr2R_10_23585001 chr2R_23585001 RAL-853_125b 1625 chr2R 23653940 23654002 chr2R 23654055 23654129 18 117 24.5 24.5 24.5 0.7 189 chr2R 23653940 3` UTR retn + chr2R 23654034 3` UTR retn + chr2R 23654129 3` UTR retn + chr2R_18_23650001 chr2R_23650001 RAL-853_125b 1626 chr2R 23664203 23664228 chr2R 23664336 23664361 5 133 16.5 15.5 16.0 0.3 158 chr2R 23664203 intron Pde8 + chr2R 23664282 intron Pde8 + chr2R 23664361 intron Pde8 + chr2R_5_23660001 chr2R_23660001 RAL-853_125b 1627 chr2R 23674132 23674191 chr2R 23674262 23674321 23 130 17.0 15.5 16.2 1.3 189 chr2R 23674132 intron Pde8 + chr2R 23674226 intron Pde8 + chr2R 23674321 exon Pde8 + chr2R_23_23670001 chr2R_23670001 RAL-853_125b 1628 chr2R 23684084 23684155 chr2R 23684230 23684301 13 146 26.0 28.0 27.0 0.5 217 chr2R 23684084 exon St3 + chr2R 23684192 intron St3 + chr2R 23684301 exon St3 + chr2R_13_23680001 chr2R_23680001 RAL-853_125b 1629 chr2R 23705631 23705634 chr2R 23710859 23710887 6 5234 50.5 57.0 53.8 0.1 5256 chr2R 23705631 exon l(2)not - chr2R 23708259 intron,exon l(2)not -,l(2)tid + chr2R 23710887 intergenic not near genes chr2R_6_23705001 chr2R_23705001 RAL-853_125b 1630 chr2R 23705623 23705701 chr2R 23710893 23710932 16 5243 59.0 53.5 56.2 0.3 5309 chr2R 23705623 exon l(2)not - chr2R 23708278 intron,exon l(2)not -,l(2)tid + chr2R 23710932 intergenic not near genes chr2R_16_23705001 chr2R_23705001 RAL-853_125b 1631 chr2R 23721766 23721784 chr2R 23721900 23721918 6 131 7.0 19.0 13.0 0.4 152 chr2R 23721766 intron Sesn + chr2R 23721842 intron Sesn + chr2R 23721918 intron Sesn + chr2R_6_23720001 chr2R_23720001 RAL-853_125b 1632 chr2R 23722485 23722531 chr2R 23722621 23722664 10 137 30.5 29.0 29.8 0.3 179 chr2R 23722485 5` UTR Sesn + chr2R 23722574 5` UTR Sesn + chr2R 23722664 5` UTR Sesn + chr2R_10_23720001 chr2R_23720001 RAL-853_125b 1633 chr2R 23739696 23739732 chr2R 23739822 23739838 8 116 12.5 7.0 9.8 0.7 142 chr2R 23739696 intron egl - chr2R 23739767 intron egl - chr2R 23739838 intron egl - chr2R_8_23735001 chr2R_23735001 RAL-853_125b 1634 chr2R 23745600 23745669 chr2R 23745733 23745802 17 132 21.0 25.0 23.0 0.7 202 chr2R 23745600 intron egl - chr2R 23745701 intron egl - chr2R 23745802 intron egl - chr2R_17_23745001 chr2R_23745001 RAL-853_125b 1635 chr2R 23758283 23758355 chr2R 23758403 23758481 12 119 8.0 13.0 10.5 1.0 198 chr2R 23758283 intron CG9850 - chr2R 23758382 intron CG9850 - chr2R 23758481 exon CG9850 - chr2R_12_23755001 chr2R_23755001 RAL-853_125b 1636 chr2R 23768503 23768564 chr2R 23768637 23768698 8 134 16.5 18.5 17.5 0.4 195 chr2R 23768503 intron CG9850 - chr2R 23768600 intron CG9850 - chr2R 23768698 intron CG9850 - chr2R_8_23765001 chr2R_23765001 RAL-853_125b 1637 chr2R 23784435 23784493 chr2R 23784563 23784621 11 128 25.5 22.0 23.8 0.4 186 chr2R 23784435 intron CG9850 - chr2R 23784528 intron CG9850 - chr2R 23784621 intron CG9850 - chr2R_11_23780001 chr2R_23780001 RAL-853_125b 1638 chr2R 23802258 23802280 chr2R 23802411 23802433 5 146 24.0 27.5 25.8 0.2 175 chr2R 23802258 exon CG30177 + chr2R 23802346 3` UTR CG30177 + chr2R 23802433 3` UTR CG30177 + chr2R_5_23800001 chr2R_23800001 RAL-853_125b 1639 chr2R 23802282 23802312 chr2R 23802404 23802465 6 145 18.0 28.0 23.0 0.2 183 chr2R 23802282 3` UTR CG30177 + chr2R 23802374 3` UTR CG30177 + chr2R 23802465 3` UTR CG30177 + chr2R_6_23800001 chr2R_23800001 RAL-853_125b 1640 chr2R 23819103 23819139 chr2R 23819247 23819284 14 143 8.0 10.0 9.0 1.4 181 chr2R 23819103 intergenic not near genes chr2R 23819194 intergenic not near genes chr2R 23819284 intergenic not near genes chr2R_14_23815001 chr2R_23815001 RAL-853_125b 1641 chr2R 23823585 23823658 chr2R 23824074 23824147 26 488 26.0 23.0 24.5 1.0 562 chr2R 23823585 intron,intron CG5549 +,CG4763 - chr2R 23823866 intron,exon CG5549 +,CG4763 - chr2R 23824147 intron,intron CG5549 +,CG4763 - chr2R_26_23820001 chr2R_23820001 RAL-853_125b 1642 chr2R 23840746 23840754 chr2R 23840886 23840894 4 140 17.0 14.5 15.8 0.2 148 chr2R 23840746 5` UTR CR44805 + chr2R 23840820 intergenic CR44805 + chr2R 23840894 intergenic CR44805 + chr2R_4_23840001 chr2R_23840001 RAL-853_125b 1643 chr2R 23914257 23914324 chr2R 23921931 23921987 412 44 7670 7.0 14.0 10.5 3.8 7730 chr2R 23914257 exon kcc + chr2R 23918122 intron kcc + chr2R 23921987 exon kcc + chr2R_44_23915001 chr2R_23915001 RAL-853_125b 1644 chr2R 23986494 23986538 chr2R 23986624 23986668 14 130 25.0 27.5 26.2 0.5 174 chr2R 23986494 intron Phm - chr2R 23986581 intron Phm - chr2R 23986668 intron,5` UTR Phm -,CG30178 + chr2R_14_23985001 chr2R_23985001 RAL-853_125b 1645 chr2R 24031336 24031407 chr2R 24031470 24031538 29 134 9.0 7.5 8.2 3.2 202 chr2R 24031336 5` UTR CG30172 - chr2R 24031437 intergenic CG30172 -,Chi - chr2R 24031538 3` UTR Chi - chr2R_29_24030001 chr2R_24030001 RAL-853_125b 1646 chr2R 24045825 24045891 chr2R 24045959 24046025 20 133 20.0 14.5 17.2 1.1 200 chr2R 24045825 intron tsr - chr2R 24045925 intron tsr - chr2R 24046025 intron tsr - chr2R_20_24045001 chr2R_24045001 RAL-853_125b 1647 chr2R 24144048 24144086 chr2R 24144190 24144228 7 142 18.5 23.5 21.0 0.3 180 chr2R 24144048 intron Dat + chr2R 24144138 intron Dat + chr2R 24144228 intron Dat + chr2R_7_24140001 chr2R_24140001 RAL-853_125b 1648 chr2R 24147026 24147095 chr2R 24154644 24154703 412 31 7620 6.0 4.5 5.2 5.0 7677 chr2R 24147026 intron Dat + chr2R 24150864 intron Dat + chr2R 24154703 intron Dat + chr2R_31_24150001 chr2R_24150001 RAL-853_125b 1649 chr2R 24177191 24177262 chr2R 24184726 24184797 412 27 7535 6.5 3.0 4.8 4.7 7606 chr2R 24177191 3` UTR Nop60B + chr2R 24180994 intron Nop60B + chr2R 24184797 intron Nop60B + chr2R_27_24180001 chr2R_24180001 RAL-853_125b 1650 chr2R 24204518 24204578 chr2R 24204650 24204699 9 131 26.5 24.0 25.2 0.3 181 chr2R 24204518 intron CG11406 - chr2R 24204608 intron CG11406 - chr2R 24204699 intron CG11406 - chr2R_9_24200001 chr2R_24200001 RAL-853_125b 1651 chr2R 24228383 24228424 chr2R 24228476 24228548 8 106 14.0 20.5 17.2 0.4 165 chr2R 24228383 intron CG30419 - chr2R 24228466 intron CG30419 - chr2R 24228548 intron CG30419 - chr2R_8_24225001 chr2R_24225001 RAL-853_125b 1652 chr2R 24278285 24278347 chr2R 24278412 24278475 15 127 14.0 21.0 17.5 0.8 190 chr2R 24278285 intron nvy + chr2R 24278380 intron nvy + chr2R 24278475 intron nvy + chr2R_15_24275001 chr2R_24275001 RAL-853_125b 1653 chr2R 24287102 24287152 chr2R 24287229 24287279 8 127 28.0 22.0 25.0 0.3 177 chr2R 24287102 intron nvy + chr2R 24287190 intron nvy + chr2R 24287279 intron nvy + chr2R_8_24285001 chr2R_24285001 RAL-853_125b 1654 chr2R 24303527 24303538 chr2R 24303611 24303647 6 107 14.5 23.0 18.8 0.3 120 chr2R 24303527 intergenic not near genes chr2R 24303587 intergenic not near genes chr2R 24303647 intergenic not near genes chr2R_6_24300001 chr2R_24300001 RAL-853_125b 1655 chr2R 24320136 24320202 chr2R 24320263 24320319 14 122 22.5 26.0 24.2 0.6 183 chr2R 24320136 intergenic not near genes chr2R 24320228 intergenic not near genes chr2R 24320319 intergenic not near genes chr2R_14_24320001 chr2R_24320001 RAL-853_125b 1656 chr2R 24320665 24320731 chr2R 24320926 24320992 17 259 19.5 26.5 23.0 0.7 327 chr2R 24320665 intergenic not near genes chr2R 24320828 intergenic not near genes chr2R 24320992 intergenic not near genes chr2R_17_24320001 chr2R_24320001 RAL-853_125b 1657 chr2R 24351366 24351400 chr2R 24351497 24351531 4 131 18.0 17.0 17.5 0.2 165 chr2R 24351366 intron,5` UTR bs +,CG44812 - chr2R 24351448 intron bs + chr2R 24351531 intron,3` UTR bs +,CR44811 - chr2R_4_24350001 chr2R_24350001 RAL-853_125b 1658 chr2R 24351402 24351439 chr2R 24351492 24351570 8 122 16.0 16.0 16.0 0.5 168 chr2R 24351402 intron bs + chr2R 24351486 intron,3` UTR bs +,CR44811 - chr2R 24351570 intron,3` UTR bs +,CR44811 - chr2R_8_24350001 chr2R_24350001 RAL-853_125b 1659 chr2R 24353379 24353417 chr2R 24361791 24361828 roo 5 8412 14.0 7.5 10.8 0.4 8449 chr2R 24353379 intron,intron bs +,CR44811 - chr2R 24357604 intron,intron bs +,CR44811 - chr2R 24361828 intron,intron bs +,CR44811 - chr2R_5_24355001 chr2R_24355001 RAL-853_125b 1660 chr2R 24383781 24383846 chr2R 24383912 24383977 15 131 19.0 19.5 19.2 0.7 196 chr2R 24383781 intron mAChR-A - chr2R 24383879 intron mAChR-A - chr2R 24383977 exon mAChR-A - chr2R_15_24380001 chr2R_24380001 RAL-853_125b 1661 chr2R 24430765 24430828 chr2R 24430896 24430959 11 131 20.0 21.5 20.8 0.5 194 chr2R 24430765 intergenic CG15873 - chr2R 24430862 intergenic CG15873 -,Pgam5-2 - chr2R 24430959 intergenic CG15873 -,Pgam5-2 - chr2R_11_24430001 chr2R_24430001 RAL-853_125b 1662 chr2R 24461011 24461077 chr2R 24461773 24461827 15 761 21.5 23.0 22.2 0.6 816 chr2R 24461011 intron CG13579 + chr2R 24461419 intron CG13579 + chr2R 24461827 intron CG13579 + chr2R_15_24460001 chr2R_24460001 RAL-853_125b 1663 chr2R 24464808 24464861 chr2R 24465173 24465233 13 369 27.0 20.5 23.8 0.5 425 chr2R 24464808 intron CG13579 + chr2R 24465020 intron CG13579 + chr2R 24465233 intron CG13579 + chr2R_13_24465001 chr2R_24465001 RAL-853_125b 1664 chr2R 24493043 24493086 chr2R 24493182 24493225 16 139 5.5 6.5 6.0 2.3 182 chr2R 24493043 intergenic CG13589 -,CG13590 - chr2R 24493134 intergenic CG13590 -,CG13589 - chr2R 24493225 intergenic CG13590 -,CG13589 - chr2R_16_24490001 chr2R_24490001 RAL-853_125b 1665 chr2R 24590075 24590140 chr2R 24590217 24590282 20 132 20.5 26.5 23.5 0.8 207 chr2R 24590075 intron pio + chr2R 24590178 intron pio + chr2R 24590282 intron pio + chr2R_20_24590001 chr2R_24590001 RAL-853_125b 1666 chr2R 24591475 24591546 chr2R 24591601 24591676 15 127 18.0 18.5 18.2 0.8 201 chr2R 24591475 intron pio + chr2R 24591576 intron pio + chr2R 24591676 intron pio + chr2R_15_24590001 chr2R_24590001 RAL-853_125b 1667 chr2R 24647529 24647614 chr2R 24655147 24655221 412 20 7610 6.5 6.5 6.5 2.7 7692 chr2R 24647529 intergenic not near genes chr2R 24651375 intergenic not near genes chr2R 24655221 intergenic not near genes chr2R_20_24650001 chr2R_24650001 RAL-853_125b 1668 chr2R 24659935 24659987 chr2R 24660071 24660102 12 134 22.5 23.5 23.0 0.5 167 chr2R 24659935 intergenic not near genes chr2R 24660018 intergenic not near genes chr2R 24660102 intergenic not near genes chr2R_12_24660001 chr2R_24660001 RAL-853_125b 1669 chr2R 24689693 24689756 chr2R 24689832 24689895 17 137 21.5 20.5 21.0 0.8 202 chr2R 24689693 intergenic not near genes chr2R 24689794 intergenic not near genes chr2R 24689895 intergenic not near genes chr2R_17_24685001 chr2R_24685001 RAL-853_125b 1670 chr2R 24719802 24719818 chr2R 24719939 24719965 6 152 23.5 27.0 25.2 0.2 163 chr2R 24719802 intron Mid1 - chr2R 24719884 intron Mid1 - chr2R 24719965 intron Mid1 - chr2R_6_24715001 chr2R_24715001 RAL-853_125b 1671 chr2R 24727842 24727864 chr2R 24735395 24735422 mdg1 5 7557 23.0 15.0 19.0 0.2 7580 chr2R 24727842 intron Mid1 - chr2R 24731632 intron Mid1 - chr2R 24735422 intron Mid1 - chr2R_5_24730001 chr2R_24730001 RAL-853_125b 1672 chr2R 24727866 24727917 chr2R 24735393 24735424 mdg1 18 7545 7.5 14.5 11.0 1.5 7558 chr2R 24727866 intron Mid1 - chr2R 24731645 intron Mid1 - chr2R 24735424 intron Mid1 - chr2R_18_24730001 chr2R_24730001 RAL-853_125b 1673 chr2R 24763564 24763644 chr2R 24765590 24765627 G2 30 2018 5.0 12.5 8.8 3.1 2063 chr2R 24763564 exon CG3894 + chr2R 24764596 intron CG3894 + chr2R 24765627 exon CG3894 + chr2R_30_24760001 chr2R_24760001 RAL-853_125b 1674 chr2R 24859791 24859862 chr2R 24859927 24859948 8 126 17.0 10.5 13.8 0.5 157 chr2R 24859791 5` UTR CR44829 + chr2R 24859870 5` UTR CR44829 + chr2R 24859948 5` UTR CR44829 + chr2R_8_24855001 chr2R_24855001 RAL-853_125b 1675 chr2R 24884001 24884077 chr2R 24884133 24884209 28 131 8.5 7.0 7.8 3.2 208 chr2R 24884001 intron NKAIN + chr2R 24884105 intron NKAIN + chr2R 24884209 intron NKAIN + chr2R_28_24880001 chr2R_24880001 RAL-853_125b 1676 chr2R 24894582 24894645 chr2R 24895630 24895694 19 1054 25.0 22.5 23.8 0.8 1112 chr2R 24894582 exon NaCP60E + chr2R 24895138 intron NaCP60E + chr2R 24895694 intron NaCP60E + chr2R_19_24895001 chr2R_24895001 RAL-853_125b 1677 chr2R 24933012 24933071 chr2R 24933441 24933500 20 433 55.0 40.0 47.5 0.4 488 chr2R 24933012 intron CG30427 - chr2R 24933256 intron CG30427 - chr2R 24933500 intron CG30427 - chr2R_20_24930001 chr2R_24930001 RAL-853_125b 1678 chr2R 24955336 24955394 chr2R 24955486 24955537 10 148 22.5 20.0 21.2 0.5 201 chr2R 24955336 3` UTR CG12851 + chr2R 24955436 3` UTR CG12851 + chr2R 24955537 3` UTR CG12851 + chr2R_10_24955001 chr2R_24955001 RAL-853_125b 1679 chr2R 25004846 25004912 chr2R 25004974 25005030 37 126 10.5 6.5 8.5 3.9 184 chr2R 25004846 intron zip - chr2R 25004938 intron zip - chr2R 25005030 intron zip - chr2R_37_25000001 chr2R_25000001 RAL-853_125b 1680 chr2R 25018297 25018368 chr2R 25018448 25018519 33 148 8.5 15.5 12.0 2.5 222 chr2R 25018297 intron uzip + chr2R 25018408 intron uzip + chr2R 25018519 intron uzip + chr2R_33_25015001 chr2R_25015001 RAL-853_125b 1681 chr2R 25022594 25022673 chr2R 25022728 25022807 36 134 5.5 12.5 9.0 3.6 213 chr2R 25022594 intron uzip + chr2R 25022700 intron uzip + chr2R 25022807 intron uzip + chr2R_36_25020001 chr2R_25020001 RAL-853_125b 1682 chr2R 25053096 25053118 chr2R 25053224 25053246 5 128 26.5 28.5 27.5 0.2 150 chr2R 25053096 intergenic not near genes chr2R 25053171 intergenic not near genes chr2R 25053246 intergenic not near genes chr2R_5_25050001 chr2R_25050001 RAL-853_125b 1683 chr2R 25061949 25061988 chr2R 25062078 25062117 11 127 21.0 20.0 20.5 0.5 168 chr2R 25061949 intergenic gsb + chr2R 25062033 5` UTR gsb + chr2R 25062117 5` UTR gsb + chr2R_11_25060001 chr2R_25060001 RAL-853_125b 1684 chr2R 25080287 25080335 chr2R 25080701 25080759 5 422 26.0 33.0 29.5 0.2 472 chr2R 25080287 intron gol - chr2R 25080523 intron gol - chr2R 25080759 intron gol - chr2R_5_25080001 chr2R_25080001 RAL-853_125b 1685 chr2R 25081565 25081634 chr2R 25082706 25082780 19 1144 24.5 16.0 20.2 0.9 1215 chr2R 25081565 intron gol - chr2R 25082172 intron gol - chr2R 25082780 intron gol - chr2R_19_25080001 chr2R_25080001 RAL-853_125b 1686 chr2R 25101232 25101300 chr2R 25101384 25101452 25 152 9.5 6.5 8.0 2.8 220 chr2R 25101232 intron lov - chr2R 25101342 intron lov - chr2R 25101452 intron lov - chr2R_25_25100001 chr2R_25100001 RAL-853_125b 1687 chr2R 25122915 25122992 chr2R 25123044 25123121 17 129 12.0 13.5 12.8 1.2 206 chr2R 25122915 intron lov - chr2R 25123018 intron lov - chr2R 25123121 intron lov - chr2R_17_25120001 chr2R_25120001 RAL-853_125b 1688 chr2R 25141618 25141625 chr2R 25159358 25159365 roo 4 17740 17.0 10.5 13.8 0.3 17747 chr2R 25141618 intergenic not near genes chr2R 25150492 intergenic not near genes chr2R 25159365 intergenic not near genes chr2R_4_25150001 chr2R_25150001 RAL-853_125b 1689 chr2R 25141629 25141674 chr2R 25159357 25159414 roo 12 17738 7.0 10.5 8.8 1.2 17785 chr2R 25141629 intergenic not near genes chr2R 25150522 intergenic not near genes chr2R 25159414 intergenic not near genes chr2R_12_25150001 chr2R_25150001 RAL-853_125b 1690 chr2R 25180712 25180790 chr2R 25180841 25180917 9 128 15.5 14.0 14.8 0.6 205 chr2R 25180712 intergenic not near genes chr2R 25180814 intergenic not near genes chr2R 25180917 intergenic not near genes chr2R_9_25180001 chr2R_25180001 RAL-853_125b 1691 chr2R 25181060 25181127 chr2R 25181207 25181274 11 146 18.0 22.5 20.2 0.5 214 chr2R 25181060 intergenic not near genes chr2R 25181167 intergenic not near genes chr2R 25181274 intergenic not near genes chr2R_11_25180001 chr2R_25180001 RAL-853_125b 1692 chr2R 25191679 25191715 chr2R 25191807 25191843 4 128 8.5 12.0 10.2 0.4 164 chr2R 25191679 intron CG9380 - chr2R 25191761 intron CG9380 - chr2R 25191843 intron CG9380 - chr2R_4_25190001 chr2R_25190001 RAL-853_125b 1693 chr2R 25193302 25193362 chr2R 25193494 25193555 7 191 16.0 12.5 14.2 0.5 253 chr2R 25193302 intron CG9380 - chr2R 25193428 intron CG9380 - chr2R 25193555 intron CG9380 - chr2R_7_25190001 chr2R_25190001 RAL-853_125b 1694 chr2R 25234716 25234792 chr2R 25234846 25234922 10 130 14.5 16.5 15.5 0.6 206 chr2R 25234716 intron CG9380 - chr2R 25234819 intron CG9380 - chr2R 25234922 intron CG9380 - chr2R_10_25230001 chr2R_25230001 RAL-853_125b 1695 chr2R 25253447 25253471 chr2R 25253574 25253598 6 127 20.0 21.0 20.5 0.3 151 chr2R 25253447 intron,intron CG9380 -,CG30428 + chr2R 25253522 intron,intron CG9380 -,CG30428 + chr2R 25253598 intron,5` UTR CG9380 -,CG30428 + chr2R_6_25250001 chr2R_25250001 RAL-853_125b 1696 chr3L 34266 34332 chr3L 34604 34670 32 337 9.5 14.0 11.8 2.5 404 chr3L 34266 intergenic not near genes chr3L 34468 intergenic not near genes chr3L 34670 intergenic not near genes chr3L_32_30001 chr3L_30001 RAL-853_125b 1697 chr3L 58887 58959 chr3L 59022 59094 37 134 11.5 7.0 9.2 3.6 207 chr3L 58887 intergenic not near genes chr3L 58990 intergenic not near genes chr3L 59094 intergenic not near genes chr3L_37_55001 chr3L_55001 RAL-853_125b 1698 chr3L 75592 75666 chr3L 75733 75807 31 140 8.0 5.5 6.8 4.0 215 chr3L 75592 intergenic CG13405 - chr3L 75700 intergenic CG13405 - chr3L 75807 intergenic CG13405 - chr3L_31_75001 chr3L_75001 RAL-853_125b 1699 chr3L 110172 110231 chr3L 119389 119448 roo 12 9216 10.5 11.5 11.0 1.0 9276 chr3L 110172 intergenic not near genes chr3L 114810 intergenic not near genes chr3L 119448 intergenic not near genes chr3L_12_110001 chr3L_110001 RAL-853_125b 1700 chr3L 351941 352006 chr3L 352070 352125 31 128 9.5 7.0 8.2 3.4 184 chr3L 351941 intron Ptpmeg + chr3L 352033 intron Ptpmeg + chr3L 352125 intron Ptpmeg + chr3L_31_350001 chr3L_350001 RAL-853_125b 1701 chr3L 365476 365548 chr3L 365612 365684 33 136 0.0 8.0 4.0 6.6 208 chr3L 365476 3` UTR CG1233 + chr3L 365580 3` UTR CG1233 + chr3L 365684 3` UTR CG13884 - chr3L_33_365001 chr3L_365001 RAL-853_125b 1702 chr3L 375197 375280 chr3L 375333 375414 14 131 0.5 7.5 4.0 2.8 217 chr3L 375197 intron trh - chr3L 375306 intron trh - chr3L 375414 intron trh - chr3L_14_375001 chr3L_375001 RAL-853_125b 1703 chr3L 402651 402711 chr3L 409754 409814 297 39 7101 13.5 12.0 12.8 2.8 7163 chr3L 402651 intergenic not near genes chr3L 406232 intergenic not near genes chr3L 409814 intergenic not near genes chr3L_39_405001 chr3L_405001 RAL-853_125b 1704 chr3L 428140 428221 chr3L 428311 428358 11 162 5.5 0.0 2.8 2.9 218 chr3L 428140 intergenic not near genes chr3L 428249 intergenic not near genes chr3L 428358 intergenic not near genes chr3L_11_425001 chr3L_425001 RAL-853_125b 1705 chr3L 508559 508569 chr3L 508736 508746 6 177 20.0 11.5 15.8 0.4 187 chr3L 508559 5` UTR klar - chr3L 508652 5` UTR klar - chr3L 508746 5` UTR klar - chr3L_6_505001 chr3L_505001 RAL-853_125b 1706 chr3L 508571 508623 chr3L 508731 508800 26 174 8.5 10.0 9.2 2.5 229 chr3L 508571 5` UTR klar - chr3L 508686 5` UTR klar - chr3L 508800 intron klar - chr3L_26_505001 chr3L_505001 RAL-853_125b 1707 chr3L 524691 524774 chr3L 524825 524906 15 132 0.0 5.0 2.5 4.3 215 chr3L 524691 intron klar - chr3L 524798 intron klar - chr3L 524906 intron klar - chr3L_15_520001 chr3L_520001 RAL-853_125b 1708 chr3L 534740 534803 chr3L 535041 535102 19 303 3.5 6.5 5.0 3.2 362 chr3L 534740 intron klar - chr3L 534921 intron klar - chr3L 535102 intron klar - chr3L_19_530001 chr3L_530001 RAL-853_125b 1709 chr3L 563927 563932 chr3L 564156 564161 4 229 25.0 11.0 18.0 0.2 234 chr3L 563927 intron hipk + chr3L 564044 intron hipk + chr3L 564161 intron hipk + chr3L_4_560001 chr3L_560001 RAL-853_125b 1710 chr3L 563933 563996 chr3L 564155 564225 38 228 9.5 11.0 10.2 3.4 292 chr3L 563933 intron hipk + chr3L 564079 intron hipk + chr3L 564225 intron hipk + chr3L_38_560001 chr3L_560001 RAL-853_125b 1711 chr3L 642437 642492 chr3L 642567 642633 23 140 11.5 9.5 10.5 2.0 196 chr3L 642437 5` UTR CR43334 + chr3L 642535 5` UTR CR43334 + chr3L 642633 5` UTR CR43334 + chr3L_23_640001 chr3L_640001 RAL-853_125b 1712 chr3L 651345 651409 chr3L 651483 651547 27 138 11.0 8.5 9.8 2.5 202 chr3L 651345 intergenic Gale +,CG3402 - chr3L 651446 intergenic CG3402 -,Gale + chr3L 651547 3` UTR CG3402 - chr3L_27_650001 chr3L_650001 RAL-853_125b 1713 chr3L 789863 789947 chr3L 790398 790483 roo 13 536 1.0 0.0 0.5 8.7 620 chr3L 789863 intergenic not near genes chr3L 790173 intergenic not near genes chr3L 790483 intergenic not near genes chr3L_13_790001 chr3L_790001 RAL-853_125b 1714 chr3L 800654 800725 chr3L 800788 800865 25 136 3.5 5.0 4.2 4.8 211 chr3L 800654 intergenic not near genes chr3L 800760 intergenic not near genes chr3L 800865 intergenic not near genes chr3L_25_800001 chr3L_800001 RAL-853_125b 1715 chr3L 802565 802566 chr3L 11777678 11777678 6 10975112 37.5 32.0 34.8 0.2 10975113 chr3L 802565 intergenic not near genes chr3L 6290122 intergenic not near genes chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_6_6290001 chr3L_6290001 RAL-853_125b 1716 chr3L 822059 822070 chr3L 822184 822200 5 129 0.0 19.0 9.5 0.5 141 chr3L 822059 intergenic not near genes chr3L 822130 intergenic not near genes chr3L 822200 intergenic not near genes chr3L_5_820001 chr3L_820001 RAL-853_125b 1717 chr3L 857956 858031 chr3L 866484 866541 Tirant 25 8520 11.0 9.5 10.2 2.2 8585 chr3L 857956 intergenic not near genes chr3L 862248 intergenic not near genes chr3L 866541 5` UTR CG12502 + chr3L_25_860001 chr3L_860001 RAL-853_125b 1718 chr3L 901383 901399 chr3L 901517 901532 4 134 14.0 14.0 14.0 0.3 149 chr3L 901383 intergenic not near genes chr3L 901458 intergenic not near genes chr3L 901532 intergenic not near genes chr3L_4_900001 chr3L_900001 RAL-853_125b 1719 chr3L 901400 901455 chr3L 901513 901519 22 121 7.5 13.5 10.5 1.9 119 chr3L 901400 intergenic not near genes chr3L 901460 intergenic not near genes chr3L 901519 intergenic not near genes chr3L_22_900001 chr3L_900001 RAL-853_125b 1720 chr3L 905024 905092 chr3L 905156 905226 10 131 0.5 5.0 2.8 2.6 202 chr3L 905024 intergenic not near genes chr3L 905125 intergenic not near genes chr3L 905226 intergenic not near genes chr3L_10_905001 chr3L_905001 RAL-853_125b 1721 chr3L 925133 925204 chr3L 932609 932637 mdg1 20 7474 4.0 3.5 3.8 4.2 7504 chr3L 925133 intron Glut1 + chr3L 928885 intron Glut1 + chr3L 932637 intron Glut1 + chr3L_20_925001 chr3L_925001 RAL-853_125b 1722 chr3L 933859 933936 chr3L 934013 934089 27 154 6.5 7.0 6.8 3.5 230 chr3L 933859 intron Glut1 + chr3L 933974 intron Glut1 + chr3L 934089 intron Glut1 + chr3L_27_930001 chr3L_930001 RAL-853_125b 1723 chr3L 939735 939788 chr3L 940906 940959 jockey 26 1171 12.5 10.0 11.2 2.1 1224 chr3L 939735 intron Glut1 + chr3L 940347 intron Glut1 + chr3L 940959 intron Glut1 + chr3L_26_940001 chr3L_940001 RAL-853_125b 1724 chr3L 958276 958342 chr3L 958410 958476 23 131 9.0 9.5 9.2 2.3 200 chr3L 958276 intron Glut1 + chr3L 958376 intron Glut1 + chr3L 958476 intron Glut1 + chr3L_23_955001 chr3L_955001 RAL-853_125b 1725 chr3L 1015109 1015165 chr3L 1015228 1015264 7 121 2.0 3.5 2.8 1.8 155 chr3L 1015109 intron trio - chr3L 1015186 intron trio - chr3L 1015264 intron trio - chr3L_7_1015001 chr3L_1015001 RAL-853_125b 1726 chr3L 1028770 1028835 chr3L 1028906 1028971 28 136 7.0 9.5 8.2 3.0 201 chr3L 1028770 intron trio - chr3L 1028870 intron trio - chr3L 1028971 intron trio - chr3L_28_1025001 chr3L_1025001 RAL-853_125b 1727 chr3L 1031534 1031595 chr3L 1031660 1031713 32 118 10.5 8.5 9.5 3.0 179 chr3L 1031534 intron trio - chr3L 1031624 intron trio - chr3L 1031713 intron trio - chr3L_32_1030001 chr3L_1030001 RAL-853_125b 1728 chr3L 1047326 1047385 chr3L 1055170 1055217 412 12 7845 3.0 2.0 2.5 3.4 7891 chr3L 1047326 intron bab1 - chr3L 1051272 intron bab1 - chr3L 1055217 intron bab1 - chr3L_12_1050001 chr3L_1050001 RAL-853_125b 1729 chr3L 1109586 1109659 chr3L 1109724 1109797 31 138 11.0 12.5 11.8 2.4 211 chr3L 1109586 intergenic not near genes chr3L 1109692 intergenic not near genes chr3L 1109797 intergenic not near genes chr3L_31_1105001 chr3L_1105001 RAL-853_125b 1730 chr3L 1154084 1154161 chr3L 1163281 1163342 roo 18 9198 8.0 5.5 6.8 2.3 9258 chr3L 1154084 intron bab2 - chr3L 1158713 intron bab2 - chr3L 1163342 intron bab2 - chr3L_18_1155001 chr3L_1155001 RAL-853_125b 1731 chr3L 1166974 1167002 chr3L 1167101 1167129 6 127 7.5 6.0 6.8 0.8 155 chr3L 1166974 intron bab2 - chr3L 1167052 intron bab2 - chr3L 1167129 intron bab2 - chr3L_6_1165001 chr3L_1165001 RAL-853_125b 1732 chr3L 1175686 1175754 chr3L 1175867 1175935 18 177 3.0 7.5 5.2 2.9 249 chr3L 1175686 intron bab2 - chr3L 1175810 intron bab2 - chr3L 1175935 intron bab2 - chr3L_18_1175001 chr3L_1175001 RAL-853_125b 1733 chr3L 1189549 1189589 chr3L 1189678 1189718 27 127 6.0 11.0 8.5 2.8 169 chr3L 1189549 intergenic CG13912 + chr3L 1189634 5` UTR CG13912 + chr3L 1189718 5` UTR CG13912 + chr3L_27_1185001 chr3L_1185001 RAL-853_125b 1734 chr3L 1189590 1189617 chr3L 1189676 1189746 21 121 8.0 10.5 9.2 2.1 156 chr3L 1189590 5` UTR CG13912 + chr3L 1189668 5` UTR CG13912 + chr3L 1189746 5` UTR CG13912 + chr3L_21_1185001 chr3L_1185001 RAL-853_125b 1735 chr3L 1219555 1219558 chr3L 1227338 1227341 412 4 7783 20.5 12.5 16.5 0.2 7786 chr3L 1219555 intron mwh + chr3L 1223448 intron mwh + chr3L 1227341 intron mwh + chr3L_4_1220001 chr3L_1220001 RAL-853_125b 1736 chr3L 1219559 1219612 chr3L 1227327 1227390 412 19 7776 10.5 9.5 10.0 1.7 7831 chr3L 1219559 intron mwh + chr3L 1223474 intron mwh + chr3L 1227390 intron mwh + chr3L_19_1220001 chr3L_1220001 RAL-853_125b 1737 chr3L 1236188 1236238 chr3L 1236315 1236365 13 127 6.5 1.0 3.8 2.7 177 chr3L 1236188 intron CG9194 + chr3L 1236276 intron CG9194 + chr3L 1236365 intron CG9194 + chr3L_13_1235001 chr3L_1235001 RAL-853_125b 1738 chr3L 1257619 1257651 chr3L 1257749 1257781 9 130 0.0 8.5 4.2 1.7 162 chr3L 1257619 intron CG9134 + chr3L 1257700 intron CG9134 + chr3L 1257781 intron CG9134 + chr3L_9_1255001 chr3L_1255001 RAL-853_125b 1739 chr3L 1347127 1347186 chr3L 1347245 1347312 32 130 13.5 10.0 11.8 2.5 185 chr3L 1347127 intron Ptp61F - chr3L 1347220 intron Ptp61F - chr3L 1347312 intron Ptp61F - chr3L_32_1345001 chr3L_1345001 RAL-853_125b 1740 chr3L 1356959 1356962 chr3L 1357092 1357095 4 133 20.0 12.0 16.0 0.2 136 chr3L 1356959 intron Ptp61F - chr3L 1357027 intron Ptp61F - chr3L 1357095 intron Ptp61F - chr3L_4_1355001 chr3L_1355001 RAL-853_125b 1741 chr3L 1356965 1357008 chr3L 1357089 1357146 18 129 11.5 10.5 11.0 1.5 181 chr3L 1356965 intron Ptp61F - chr3L 1357056 intron Ptp61F - chr3L 1357146 intron Ptp61F - chr3L_18_1355001 chr3L_1355001 RAL-853_125b 1742 chr3L 1385126 1385193 chr3L 1385263 1385330 27 137 6.0 4.5 5.2 4.4 204 chr3L 1385126 intron,intron Ptp61F -,ru + chr3L 1385228 intron,intron Ptp61F -,ru + chr3L 1385330 intron,intron Ptp61F -,ru + chr3L_27_1385001 chr3L_1385001 RAL-853_125b 1743 chr3L 1396689 1396759 chr3L 1396823 1396863 29 129 8.5 9.0 8.8 3.0 174 chr3L 1396689 intron Ptp61F - chr3L 1396776 intron Ptp61F - chr3L 1396863 intron Ptp61F - chr3L_29_1395001 chr3L_1395001 RAL-853_125b 1744 chr3L 1415729 1415801 chr3L 1415861 1415933 28 130 9.5 9.5 9.5 2.7 204 chr3L 1415729 intron Ptp61F - chr3L 1415831 intron Ptp61F - chr3L 1415933 intron Ptp61F - chr3L_28_1415001 chr3L_1415001 RAL-853_125b 1745 chr3L 1424753 1424770 chr3L 1430043 1430072 Rt1a 10 5300 0.5 13.0 6.8 1.3 5319 chr3L 1424753 intron Ptp61F - chr3L 1427412 intron Ptp61F - chr3L 1430072 intron Ptp61F - chr3L_10_1425001 chr3L_1425001 RAL-853_125b 1746 chr3L 1485691 1485737 chr3L 1486908 1486931 1360 23 1208 10.0 20.5 15.2 1.4 1240 chr3L 1485691 intron stet - chr3L 1486311 intron stet - chr3L 1486931 intron stet - chr3L_23_1485001 chr3L_1485001 RAL-853_125b 1747 chr3L 1505958 1506025 chr3L 1513599 1513656 17.6 29 7646 8.0 9.0 8.5 3.1 7698 chr3L 1505958 intron,intron Psa +,cue - chr3L 1509807 intron,intron Psa +,cue - chr3L 1513656 intron,intron Psa +,cue - chr3L_29_1505001 chr3L_1505001 RAL-853_125b 1748 chr3L 1536812 1536885 chr3L 1536946 1537019 23 132 8.0 2.5 5.2 3.7 207 chr3L 1536812 5` UTR CG12091 - chr3L 1536916 intergenic CG12091 -,CG7852 + chr3L 1537019 intergenic CG7852 +,CG12091 - chr3L_23_1535001 chr3L_1535001 RAL-853_125b 1749 chr3L 1571234 1571490 chr3L 1571346 1571626 33 131 5.0 10.5 7.8 3.7 392 chr3L 1571234 intron CG12004 + chr3L 1571430 intron CG12004 + chr3L 1571626 intron CG12004 + chr3L_33_1570001 chr3L_1570001 RAL-853_125b 1750 chr3L 1584111 1584115 chr3L 1584243 1584247 5 132 0.0 12.0 6.0 0.7 136 chr3L 1584111 intron CG13917 + chr3L 1584179 intron CG13917 + chr3L 1584247 intron CG13917 + chr3L_5_1580001 chr3L_1580001 RAL-853_125b 1751 chr3L 1584117 1584125 chr3L 1584233 1584254 4 127 0.0 10.0 5.0 0.7 137 chr3L 1584117 intron CG13917 + chr3L 1584186 intron CG13917 + chr3L 1584254 intron CG13917 + chr3L_4_1580001 chr3L_1580001 RAL-853_125b 1752 chr3L 1585896 1585937 chr3L 1586027 1586068 12 131 5.5 0.0 2.8 3.2 172 chr3L 1585896 intron CG13917 + chr3L 1585982 intron CG13917 + chr3L 1586068 intron CG13917 + chr3L_12_1585001 chr3L_1585001 RAL-853_125b 1753 chr3L 1631017 1631059 chr3L 1631140 1631186 17 123 14.5 13.5 14.0 1.1 169 chr3L 1631017 3` UTR nSyb - chr3L 1631102 3` UTR nSyb - chr3L 1631186 3` UTR nSyb - chr3L_17_1630001 chr3L_1630001 RAL-853_125b 1754 chr3L 1704817 1704898 chr3L 1705097 1705173 22 277 10.0 0.0 5.0 3.7 356 chr3L 1704817 intron CG7991 + chr3L 1704995 intron CG7991 + chr3L 1705173 intron CG7991 + chr3L_22_1700001 chr3L_1700001 RAL-853_125b 1755 chr3L 1740848 1740884 chr3L 1741109 1741142 pogo 14 286 10.5 8.5 9.5 1.3 294 chr3L 1740848 intron Gk + chr3L 1740995 intron Gk + chr3L 1741142 intron Gk + chr3L_14_1740001 chr3L_1740001 RAL-853_125b 1756 chr3L 1848596 1848668 chr3L 1848724 1848796 27 127 4.0 7.0 5.5 4.2 200 chr3L 1848596 intergenic not near genes chr3L 1848696 intergenic not near genes chr3L 1848796 intergenic not near genes chr3L_27_1845001 chr3L_1845001 RAL-853_125b 1757 chr3L 1853026 1853047 chr3L 1853153 1853174 14 127 6.0 11.0 8.5 1.5 148 chr3L 1853026 intron CG13936 - chr3L 1853100 intron CG13936 - chr3L 1853174 intron CG13936 - chr3L_14_1850001 chr3L_1850001 RAL-853_125b 1758 chr3L 1882316 1882377 chr3L 1882462 1882522 22 145 7.5 11.5 9.5 2.1 206 chr3L 1882316 intron CG13937 - chr3L 1882419 intron CG13937 - chr3L 1882522 intron CG13937 - chr3L_22_1880001 chr3L_1880001 RAL-853_125b 1759 chr3L 1885240 1885315 chr3L 1885374 1885449 22 133 6.5 8.0 7.2 2.7 209 chr3L 1885240 intergenic Aprt -,Tmhs + chr3L 1885344 intergenic Tmhs +,Aprt - chr3L 1885449 intergenic Tmhs +,Aprt - chr3L_22_1885001 chr3L_1885001 RAL-853_125b 1760 chr3L 1922400 1922419 chr3L 1922530 1922544 9 129 13.0 11.0 12.0 0.7 144 chr3L 1922400 intron Dbx + chr3L 1922472 intron Dbx + chr3L 1922544 intron Dbx + chr3L_9_1920001 chr3L_1920001 RAL-853_125b 1761 chr3L 1922422 1922440 chr3L 1922517 1922570 8 121 8.5 8.5 8.5 0.8 148 chr3L 1922422 intron Dbx + chr3L 1922496 intron Dbx + chr3L 1922570 intron Dbx + chr3L_8_1920001 chr3L_1920001 RAL-853_125b 1762 chr3L 1991074 1991150 chr3L 1991203 1991278 12 129 8.0 6.5 7.2 1.5 204 chr3L 1991074 intergenic not near genes chr3L 1991176 intergenic not near genes chr3L 1991278 intergenic not near genes chr3L_12_1990001 chr3L_1990001 RAL-853_125b 1763 chr3L 2006420 2006497 chr3L 2006550 2006609 30 127 5.5 3.5 4.5 5.5 189 chr3L 2006420 intergenic not near genes chr3L 2006514 intergenic not near genes chr3L 2006609 intergenic not near genes chr3L_30_2005001 chr3L_2005001 RAL-853_125b 1764 chr3L 2035219 2035300 chr3L 2035345 2035430 19 129 8.5 3.0 5.8 2.8 211 chr3L 2035219 intergenic not near genes chr3L 2035324 intergenic not near genes chr3L 2035430 intergenic not near genes chr3L_19_2035001 chr3L_2035001 RAL-853_125b 1765 chr3L 2108207 2108276 chr3L 2113461 2113530 copia 32 5254 7.0 8.0 7.5 3.8 5323 chr3L 2108207 intron sls - chr3L 2110868 intron sls - chr3L 2113530 intron sls - chr3L_32_2110001 chr3L_2110001 RAL-853_125b 1766 chr3L 2139162 2139228 chr3L 2139293 2139359 25 131 7.5 9.0 8.2 2.7 197 chr3L 2139162 intron zormin - chr3L 2139260 intron zormin - chr3L 2139359 intron zormin - chr3L_25_2135001 chr3L_2135001 RAL-853_125b 1767 chr3L 2165421 2165450 chr3L 2167317 2167340 11 1894 11.5 16.0 13.8 0.7 1919 chr3L 2165421 intergenic not near genes chr3L 2166380 intergenic not near genes chr3L 2167340 intergenic CG15879 - chr3L_11_2165001 chr3L_2165001 RAL-853_125b 1768 chr3L 2199040 2199043 chr3L 2199164 2199169 4 126 19.0 12.5 15.8 0.2 129 chr3L 2199040 intergenic not near genes chr3L 2199104 intergenic not near genes chr3L 2199169 intergenic not near genes chr3L_4_2195001 chr3L_2195001 RAL-853_125b 1769 chr3L 2199046 2199097 chr3L 2199161 2199184 25 122 12.5 11.0 11.8 2.0 138 chr3L 2199046 intergenic not near genes chr3L 2199115 intergenic not near genes chr3L 2199184 intergenic not near genes chr3L_25_2195001 chr3L_2195001 RAL-853_125b 1770 chr3L 2199784 2199819 chr3L 2199910 2199945 12 126 9.5 14.0 11.8 0.9 161 chr3L 2199784 intergenic not near genes chr3L 2199864 intergenic not near genes chr3L 2199945 intergenic not near genes chr3L_12_2195001 chr3L_2195001 RAL-853_125b 1771 chr3L 2216535 2216618 chr3L 2216810 2216862 21 259 4.0 3.5 3.8 4.4 327 chr3L 2216535 intergenic not near genes chr3L 2216698 intergenic not near genes chr3L 2216862 intergenic not near genes chr3L_21_2215001 chr3L_2215001 RAL-853_125b 1772 chr3L 2278988 2279066 chr3L 2279189 2279263 23 200 0.0 4.0 2.0 7.7 275 chr3L 2278988 intergenic not near genes chr3L 2279126 intergenic not near genes chr3L 2279263 intergenic not near genes chr3L_23_2275001 chr3L_2275001 RAL-853_125b 1773 chr3L 2302518 2302595 chr3L 2302655 2302732 19 137 7.0 6.0 6.5 2.5 214 chr3L 2302518 intergenic not near genes chr3L 2302625 intergenic not near genes chr3L 2302732 intergenic not near genes chr3L_19_2300001 chr3L_2300001 RAL-853_125b 1774 chr3L 2303077 2303137 chr3L 2303289 2303349 25 212 8.0 6.5 7.2 3.0 272 chr3L 2303077 intergenic not near genes chr3L 2303213 intergenic not near genes chr3L 2303349 intergenic not near genes chr3L_25_2300001 chr3L_2300001 RAL-853_125b 1775 chr3L 2317517 2317577 chr3L 2319381 2319441 23 1864 6.5 4.5 5.5 3.5 1924 chr3L 2317517 3` UTR CR45427 - chr3L 2318479 intergenic not near genes chr3L 2319441 3` UTR CR45426 - chr3L_23_2315001 chr3L_2315001 RAL-853_125b 1776 chr3L 2331551 2331604 chr3L 2331678 2331731 23 127 7.0 10.5 8.8 2.3 180 chr3L 2331551 intron MsR1 + chr3L 2331641 intron MsR1 + chr3L 2331731 intron MsR1 + chr3L_23_2330001 chr3L_2330001 RAL-853_125b 1777 chr3L 2355416 2355465 chr3L 2355634 2355703 16 236 2.0 0.0 1.0 8.0 287 chr3L 2355416 intergenic not near genes chr3L 2355560 intergenic not near genes chr3L 2355703 intergenic not near genes chr3L_16_2355001 chr3L_2355001 RAL-853_125b 1778 chr3L 2411304 2411312 chr3L 2411434 2411442 4 129 5.0 7.5 6.2 0.6 138 chr3L 2411304 intron CG45186 + chr3L 2411373 intron CG45186 + chr3L 2411442 intron CG45186 + chr3L_4_2410001 chr3L_2410001 RAL-853_125b 1779 chr3L 2411313 2411322 chr3L 2411433 2411452 11 125 4.0 7.0 5.5 1.7 139 chr3L 2411313 intron CG45186 + chr3L 2411382 intron CG45186 + chr3L 2411452 intron CG45186 + chr3L_11_2410001 chr3L_2410001 RAL-853_125b 1780 chr3L 2411329 2411343 chr3L 2411419 2411456 11 119 3.5 5.0 4.2 2.1 127 chr3L 2411329 intron CG45186 + chr3L 2411392 intron CG45186 + chr3L 2411456 intron CG45186 + chr3L_11_2410001 chr3L_2410001 RAL-853_125b 1781 chr3L 2447458 2447527 chr3L 2456663 2456733 roo 24 9205 12.5 9.5 11.0 2.0 9275 chr3L 2447458 intron CG45186 + chr3L 2452096 intron CG45186 + chr3L 2456733 intron CG45186 + chr3L_24_2450001 chr3L_2450001 RAL-853_125b 1782 chr3L 2467405 2467484 chr3L 2467552 2467640 9 150 6.0 0.0 3.0 2.2 235 chr3L 2467405 intron CG45186 + chr3L 2467522 intron CG45186 + chr3L 2467640 intron CG45186 + chr3L_9_2465001 chr3L_2465001 RAL-853_125b 1783 chr3L 2515357 2515428 chr3L 2515489 2515560 20 132 4.0 6.5 5.2 3.2 203 chr3L 2515357 intron Spn - chr3L 2515458 intron Spn - chr3L 2515560 intron Spn - chr3L_20_2515001 chr3L_2515001 RAL-853_125b 1784 chr3L 2560957 2560982 chr3L 2561084 2561109 13 127 4.5 11.5 8.0 1.4 152 chr3L 2560957 intron msn - chr3L 2561033 intron msn - chr3L 2561109 intron msn - chr3L_13_2560001 chr3L_2560001 RAL-853_125b 1785 chr3L 2575959 2575986 chr3L 2576092 2576119 15 132 14.5 8.5 11.5 1.2 160 chr3L 2575959 intron msn - chr3L 2576039 intron msn - chr3L 2576119 intron msn - chr3L_15_2575001 chr3L_2575001 RAL-853_125b 1786 chr3L 2609628 2609652 chr3L 2609754 2609778 7 125 10.5 0.0 5.2 1.1 150 chr3L 2609628 intron Pxn - chr3L 2609703 intron Pxn - chr3L 2609778 intron Pxn - chr3L_7_2605001 chr3L_2605001 RAL-853_125b 1787 chr3L 2683900 2683975 chr3L 2684026 2684091 42 125 8.0 2.5 5.2 6.8 191 chr3L 2683900 intron Fife - chr3L 2683996 intron Fife - chr3L 2684091 intron Fife - chr3L_42_2680001 chr3L_2680001 RAL-853_125b 1788 chr3L 2719493 2719559 chr3L 2719645 2719711 18 152 5.0 6.0 5.5 2.8 218 chr3L 2719493 3` UTR Mrtf - chr3L 2719602 3` UTR Mrtf - chr3L 2719711 3` UTR Mrtf - chr3L_18_2715001 chr3L_2715001 RAL-853_125b 1789 chr3L 2751413 2751458 chr3L 2755758 2755803 F-element 19 4345 5.0 18.0 11.5 1.5 4390 chr3L 2751413 intron Mrtf - chr3L 2753608 intron Mrtf - chr3L 2755803 intron Mrtf - chr3L_19_2750001 chr3L_2750001 RAL-853_125b 1790 chr3L 2795672 2795732 chr3L 2795846 2795905 12 173 5.5 5.5 5.5 1.8 233 chr3L 2795672 intron CG43444 - chr3L 2795788 intron CG43444 - chr3L 2795905 intron CG43444 - chr3L_12_2795001 chr3L_2795001 RAL-853_125b 1791 chr3L 2835819 2835860 chr3L 2835955 2835961 14 134 9.0 8.5 8.8 1.4 142 chr3L 2835819 intron CG43444 - chr3L 2835890 intron CG43444 - chr3L 2835961 intron CG43444 - chr3L_14_2835001 chr3L_2835001 RAL-853_125b 1792 chr3L 2854428 2854503 chr3L 2854556 2854606 21 121 6.0 8.0 7.0 2.6 178 chr3L 2854428 intron CG43444 - chr3L 2854517 intron CG43444 - chr3L 2854606 intron CG43444 - chr3L_21_2850001 chr3L_2850001 RAL-853_125b 1793 chr3L 2856245 2856309 chr3L 2856381 2856440 9 132 4.5 0.0 2.2 2.8 195 chr3L 2856245 intron CG43444 - chr3L 2856342 intron CG43444 - chr3L 2856440 intron CG43444 - chr3L_9_2855001 chr3L_2855001 RAL-853_125b 1794 chr3L 2873085 2873123 chr3L 2873211 2873250 9 127 7.0 18.5 12.8 0.7 165 chr3L 2873085 intron CG43444 - chr3L 2873168 intron CG43444 - chr3L 2873250 intron CG43444 - chr3L_9_2870001 chr3L_2870001 RAL-853_125b 1795 chr3L 2873536 2873607 chr3L 2873666 2873737 26 130 5.5 5.5 5.5 4.0 201 chr3L 2873536 intron CG43444 - chr3L 2873636 intron CG43444 - chr3L 2873737 intron CG43444 - chr3L_26_2870001 chr3L_2870001 RAL-853_125b 1796 chr3L 2900477 2900484 chr3L 2900593 2900611 4 124 15.0 8.5 11.8 0.3 134 chr3L 2900477 intron Shab + chr3L 2900544 intron Shab + chr3L 2900611 intron Shab + chr3L_4_2900001 chr3L_2900001 RAL-853_125b 1797 chr3L 2900487 2900532 chr3L 2900586 2900659 18 121 10.5 8.5 9.5 1.7 172 chr3L 2900487 intron Shab + chr3L 2900573 intron Shab + chr3L 2900659 intron Shab + chr3L_18_2900001 chr3L_2900001 RAL-853_125b 1798 chr3L 2927805 2927860 chr3L 2936132 2936187 Tirant 25 8327 5.5 7.5 6.5 3.3 8382 chr3L 2927805 intron Shab + chr3L 2931996 intron Shab + chr3L 2936187 intron Shab + chr3L_25_2930001 chr3L_2930001 RAL-853_125b 1799 chr3L 3028957 3029022 chr3L 3029093 3029158 13 134 3.5 5.5 4.5 2.4 201 chr3L 3028957 intergenic not near genes chr3L 3029058 intergenic not near genes chr3L 3029158 intergenic not near genes chr3L_13_3025001 chr3L_3025001 RAL-853_125b 1800 chr3L 3040279 3040335 chr3L 3042118 3042174 S-element 14 1839 7.0 5.0 6.0 2.0 1895 chr3L 3040279 3` UTR CG2162 + chr3L 3041226 intergenic not near genes chr3L 3042174 intergenic Jafrac2 + chr3L_14_3040001 chr3L_3040001 RAL-853_125b 1801 chr3L 3051701 3051757 chr3L 3051993 3052052 pogo 17 293 12.0 8.0 10.0 1.5 351 chr3L 3051701 3` UTR CG32485 + chr3L 3051876 intergenic CG32485 + chr3L 3052052 intergenic CG32485 +,CG1271 + chr3L_17_3050001 chr3L_3050001 RAL-853_125b 1802 chr3L 3061259 3061315 chr3L 3069872 3069908 Tirant 26 8618 8.5 5.5 7.0 3.2 8649 chr3L 3061259 intron CG32486 - chr3L 3065584 intron CG32486 - chr3L 3069908 intron CG32486 - chr3L_26_3065001 chr3L_3065001 RAL-853_125b 1803 chr3L 3084440 3084496 chr3L 3084572 3084628 23 132 8.0 8.0 8.0 2.6 188 chr3L 3084440 intron CG11486 + chr3L 3084534 intron CG11486 + chr3L 3084628 intron CG11486 + chr3L_23_3080001 chr3L_3080001 RAL-853_125b 1804 chr3L 3128141 3128215 chr3L 3128277 3128351 27 136 6.5 6.0 6.2 3.8 210 chr3L 3128141 intergenic prominin-like - chr3L 3128246 intergenic not near genes chr3L 3128351 intergenic CG11537 - chr3L_27_3125001 chr3L_3125001 RAL-853_125b 1805 chr3L 3259585 3259826 chr3L 3259727 3259976 41 145 4.5 4.5 4.5 7.5 391 chr3L 3259585 intron ckd + chr3L 3259780 intron ckd + chr3L 3259976 intron ckd + chr3L_41_3255001 chr3L_3255001 RAL-853_125b 1806 chr3L 3269059 3269093 chr3L 3269200 3269234 9 141 0.5 8.0 4.2 1.7 175 chr3L 3269059 intergenic CG34265 + chr3L 3269146 intergenic CG34265 + chr3L 3269234 intergenic CG34265 + chr3L_9_3265001 chr3L_3265001 RAL-853_125b 1807 chr3L 3281411 3281421 chr3L 3281957 3281967 Doc 6 544 19.5 20.0 19.8 0.3 556 chr3L 3281411 intron CG12017 + chr3L 3281689 intron CG12017 + chr3L 3281967 intron CG12017 + chr3L_6_3280001 chr3L_3280001 RAL-853_125b 1808 chr3L 3281426 3281467 chr3L 3281937 3282006 Doc 34 534 6.0 16.0 11.0 2.8 580 chr3L 3281426 intron CG12017 + chr3L 3281716 intron CG12017 + chr3L 3282006 intron CG12017 + chr3L_34_3280001 chr3L_3280001 RAL-853_125b 1809 chr3L 3294086 3294128 chr3L 3294227 3294269 14 141 9.0 5.0 7.0 1.8 183 chr3L 3294086 intron CG12009 + chr3L 3294178 intron CG12009 + chr3L 3294269 intron CG12009 + chr3L_14_3290001 chr3L_3290001 RAL-853_125b 1810 chr3L 3307728 3307752 chr3L 3308293 3308317 10 558 21.0 9.5 15.2 0.6 589 chr3L 3307728 intron ZnT63C + chr3L 3308022 intron ZnT63C + chr3L 3308317 intron ZnT63C + chr3L_10_3305001 chr3L_3305001 RAL-853_125b 1811 chr3L 3307754 3307798 chr3L 3308292 3308338 21 557 13.0 9.5 11.2 1.7 584 chr3L 3307754 intron ZnT63C + chr3L 3308046 intron ZnT63C + chr3L 3308338 intron ZnT63C + chr3L_21_3305001 chr3L_3305001 RAL-853_125b 1812 chr3L 3389360 3389429 chr3L 3389487 3389536 15 124 5.0 4.5 4.8 2.6 176 chr3L 3389360 intergenic not near genes chr3L 3389448 intergenic not near genes chr3L 3389536 intergenic not near genes chr3L_15_3385001 chr3L_3385001 RAL-853_125b 1813 chr3L 3449217 3449233 chr3L 3449345 3449361 12 128 11.5 6.0 8.8 1.2 144 chr3L 3449217 intron eIF5B - chr3L 3449289 intron eIF5B - chr3L 3449361 intron eIF5B - chr3L_12_3445001 chr3L_3445001 RAL-853_125b 1814 chr3L 3470125 3470181 chr3L 3470251 3470307 12 126 2.0 4.5 3.2 2.9 182 chr3L 3470125 intron CG14971 - chr3L 3470216 intron CG14971 - chr3L 3470307 intron CG14971 - chr3L_12_3470001 chr3L_3470001 RAL-853_125b 1815 chr3L 3475026 3475084 chr3L 3475521 3475521 jockey 14 485 8.5 7.0 7.8 1.6 495 chr3L 3475026 intron CG42324 + chr3L 3475274 intron CG42324 + chr3L 3475521 intron CG42324 + chr3L_14_3475001 chr3L_3475001 RAL-853_125b 1816 chr3L 3483494 3483566 chr3L 3483751 3483823 26 257 8.5 4.0 6.2 3.6 329 chr3L 3483494 intron CG42324 + chr3L 3483658 intron CG42324 + chr3L 3483823 intron CG42324 + chr3L_26_3480001 chr3L_3480001 RAL-853_125b 1817 chr3L 3484245 3484313 chr3L 3484387 3484455 25 142 7.0 0.0 3.5 5.6 210 chr3L 3484245 intron,exon CG42324 +,CG43074 - chr3L 3484350 intron,exon CG42324 +,CG43074 - chr3L 3484455 intron,intron CG42324 +,CG43074 - chr3L_25_3480001 chr3L_3480001 RAL-853_125b 1818 chr3L 3494146 3494204 chr3L 3494273 3494331 19 127 0.0 9.5 4.8 3.3 185 chr3L 3494146 intron CG42324 + chr3L 3494238 intron CG42324 + chr3L 3494331 intron CG42324 + chr3L_19_3490001 chr3L_3490001 RAL-853_125b 1819 chr3L 3503968 3503985 chr3L 3504126 3504143 6 158 0.0 11.5 5.8 0.9 175 chr3L 3503968 intron CG42324 + chr3L 3504056 intron CG42324 + chr3L 3504143 intron CG42324 + chr3L_6_3500001 chr3L_3500001 RAL-853_125b 1820 chr3L 3548668 3548710 chr3L 3548840 3548882 6 172 5.0 3.0 4.0 1.2 214 chr3L 3548668 intron Eip63E + chr3L 3548775 intron Eip63E + chr3L 3548882 intron Eip63E + chr3L_6_3545001 chr3L_3545001 RAL-853_125b 1821 chr3L 3566355 3566424 chr3L 3566488 3566557 26 133 7.0 7.5 7.2 3.2 202 chr3L 3566355 intron Eip63E + chr3L 3566456 intron Eip63E + chr3L 3566557 intron Eip63E + chr3L_26_3565001 chr3L_3565001 RAL-853_125b 1822 chr3L 3580214 3580293 chr3L 3580543 3580618 19 323 5.0 9.5 7.2 2.3 404 chr3L 3580214 intron Eip63E + chr3L 3580416 intron Eip63E + chr3L 3580618 intron Eip63E + chr3L_19_3580001 chr3L_3580001 RAL-853_125b 1823 chr3L 3601257 3601319 chr3L 3606618 3606680 copia 27 5360 7.5 5.5 6.5 3.6 5423 chr3L 3601257 intron Eip63E + chr3L 3603968 intron Eip63E + chr3L 3606680 intron Eip63E + chr3L_27_3600001 chr3L_3600001 RAL-853_125b 1824 chr3L 3619358 3619425 chr3L 3619502 3619569 19 144 9.5 7.5 8.5 2.0 211 chr3L 3619358 intergenic not near genes chr3L 3619464 intergenic not near genes chr3L 3619569 intergenic not near genes chr3L_19_3615001 chr3L_3615001 RAL-853_125b 1825 chr3L 3627189 3627257 chr3L 3627344 3627412 25 155 7.5 5.5 6.5 3.3 223 chr3L 3627189 intron dar1 + chr3L 3627300 intron dar1 + chr3L 3627412 intron dar1 + chr3L_25_3625001 chr3L_3625001 RAL-853_125b 1826 chr3L 3670523 3670586 chr3L 3670661 3670724 13 137 11.5 4.5 8.0 1.4 201 chr3L 3670523 intergenic not near genes chr3L 3670624 intergenic not near genes chr3L 3670724 intergenic not near genes chr3L_13_3670001 chr3L_3670001 RAL-853_125b 1827 chr3L 3691257 3691275 chr3L 3691405 3691423 9 148 4.5 0.0 2.2 2.8 166 chr3L 3691257 intergenic not near genes chr3L 3691340 intergenic not near genes chr3L 3691423 intergenic not near genes chr3L_9_3690001 chr3L_3690001 RAL-853_125b 1828 chr3L 3763706 3763750 chr3L 3763837 3763860 9 129 7.0 0.0 3.5 2.0 154 chr3L 3763706 intron CG32264 - chr3L 3763783 intron CG32264 - chr3L 3763860 intron CG32264 - chr3L_9_3760001 chr3L_3760001 RAL-853_125b 1829 chr3L 3766690 3766750 chr3L 3766826 3766881 17 136 8.5 1.5 5.0 2.8 191 chr3L 3766690 intron CG32264 - chr3L 3766786 intron CG32264 - chr3L 3766881 intron CG32264 - chr3L_17_3765001 chr3L_3765001 RAL-853_125b 1830 chr3L 3815002 3815049 chr3L 3815133 3815180 16 131 5.0 3.0 4.0 3.2 178 chr3L 3815002 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815091 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815180 intron,intron Scsalpha +,CR43932 - chr3L_16_3815001 chr3L_3815001 RAL-853_125b 1831 chr3L 3833699 3833769 chr3L 3833990 3834060 pogo 14 291 4.0 3.5 3.8 2.9 361 chr3L 3833699 intron enc + chr3L 3833880 intron enc + chr3L 3834060 intron enc + chr3L_14_3830001 chr3L_3830001 RAL-853_125b 1832 chr3L 3849449 3849475 chr3L 3849577 3849603 9 128 6.0 12.5 9.2 0.9 154 chr3L 3849449 intron Awh + chr3L 3849526 intron Awh + chr3L 3849603 intron Awh + chr3L_9_3845001 chr3L_3845001 RAL-853_125b 1833 chr3L 3864794 3864848 chr3L 3864927 3864981 13 133 7.5 3.5 5.5 2.0 187 chr3L 3864794 intergenic CR45379 - chr3L 3864888 intergenic CR45379 - chr3L 3864981 intergenic not near genes chr3L_13_3860001 chr3L_3860001 RAL-853_125b 1834 chr3L 3877384 3877448 chr3L 3877562 3877626 14 178 8.5 5.0 6.8 1.8 242 chr3L 3877384 intergenic not near genes chr3L 3877505 intergenic not near genes chr3L 3877626 intergenic not near genes chr3L_14_3875001 chr3L_3875001 RAL-853_125b 1835 chr3L 3889109 3889130 chr3L 3889242 3889263 13 133 1.0 15.0 8.0 1.4 154 chr3L 3889109 intergenic not near genes chr3L 3889186 intergenic not near genes chr3L 3889263 intergenic not near genes chr3L_13_3885001 chr3L_3885001 RAL-853_125b 1836 chr3L 3925959 3926041 chr3L 3926100 3926184 7 143 5.0 0.5 2.8 1.8 225 chr3L 3925959 intron Eip63F-1 - chr3L 3926072 intron Eip63F-1 - chr3L 3926184 intron Eip63F-1 - chr3L_7_3925001 chr3L_3925001 RAL-853_125b 1837 chr3L 3935810 3935844 chr3L 3935938 3935972 15 128 0.5 2.0 1.2 6.8 162 chr3L 3935810 5` UTR Eip63F-2 + chr3L 3935891 5` UTR Eip63F-2 + chr3L 3935972 5` UTR Eip63F-2 + chr3L_15_3935001 chr3L_3935001 RAL-853_125b 1838 chr3L 3946146 3946150 chr3L 3946273 3946277 4 127 20.5 8.0 14.2 0.3 131 chr3L 3946146 exon CG14982 + chr3L 3946212 3` UTR CG14982 + chr3L 3946277 3` UTR CG14982 + chr3L_4_3945001 chr3L_3945001 RAL-853_125b 1839 chr3L 3946153 3946221 chr3L 3946268 3946348 31 123 8.5 8.5 8.5 3.3 195 chr3L 3946153 3` UTR CG14982 + chr3L 3946250 3` UTR CG14982 + chr3L 3946348 3` UTR CG14982 + chr3L_31_3945001 chr3L_3945001 RAL-853_125b 1840 chr3L 4050737 4050809 chr3L 4050868 4050940 24 123 5.0 9.5 7.2 2.9 203 chr3L 4050737 intron CG1136 + chr3L 4050838 intron CG1136 + chr3L 4050940 intron CG1136 + chr3L_24_4050001 chr3L_4050001 RAL-853_125b 1841 chr3L 4146804 4146810 chr3L 4146936 4146942 4 132 0.0 13.5 6.8 0.5 138 chr3L 4146804 intergenic not near genes chr3L 4146873 intergenic not near genes chr3L 4146942 intergenic not near genes chr3L_4_4145001 chr3L_4145001 RAL-853_125b 1842 chr3L 4146811 4146834 chr3L 4146903 4146966 7 126 0.0 7.0 3.5 1.6 155 chr3L 4146811 intergenic not near genes chr3L 4146888 intergenic not near genes chr3L 4146966 intergenic not near genes chr3L_7_4145001 chr3L_4145001 RAL-853_125b 1843 chr3L 4170122 4170167 chr3L 4170248 4170295 10 128 2.5 4.5 3.5 2.2 173 chr3L 4170122 intergenic Ero1L + chr3L 4170208 intergenic Ero1L + chr3L 4170295 intergenic Ero1L + chr3L_10_4170001 chr3L_4170001 RAL-853_125b 1844 chr3L 4195110 4195155 chr3L 4195241 4195308 18 149 12.0 6.0 9.0 1.8 198 chr3L 4195110 exon CG43367 + chr3L 4195209 intron CG43367 + chr3L 4195308 exon CG43367 + chr3L_18_4195001 chr3L_4195001 RAL-853_125b 1845 chr3L 4306943 4306976 chr3L 4307086 4307119 10 143 10.5 0.5 5.5 1.5 176 chr3L 4306943 intron dyl - chr3L 4307031 intron dyl - chr3L 4307119 intron dyl - chr3L_10_4305001 chr3L_4305001 RAL-853_125b 1846 chr3L 4328693 4328758 chr3L 4336241 4336306 412 31 7548 2.5 6.0 4.2 6.0 7613 chr3L 4328693 intron Cip4 - chr3L 4332500 intron Cip4 - chr3L 4336306 exon Cip4 - chr3L_31_4330001 chr3L_4330001 RAL-853_125b 1847 chr3L 4341331 4341333 chr3L 21448026 21448028 8 17106695 31.5 35.0 33.2 0.2 17106697 chr3L 4341331 intron Cip4 - chr3L 12894680 3` UTR CG14118 + chr3L 21448028 3` UTR Syx7 + chr3L_8_12890001 chr3L_12890001 RAL-853_125b 1848 chr3L 4343488 4343522 chr3L 4343635 4343669 14 147 4.0 6.0 5.0 2.3 181 chr3L 4343488 intron Cip4 - chr3L 4343578 intron Cip4 - chr3L 4343669 intron Cip4 - chr3L_14_4340001 chr3L_4340001 RAL-853_125b 1849 chr3L 4361016 4361022 chr3L 4362922 4362928 4 1906 0.0 11.0 5.5 0.6 1912 chr3L 4361016 intron Cip4 - chr3L 4361972 intron Cip4 - chr3L 4362928 intron Cip4 - chr3L_4_4360001 chr3L_4360001 RAL-853_125b 1850 chr3L 4364150 4364217 chr3L 4364289 4364356 5 139 5.5 4.0 4.8 0.9 206 chr3L 4364150 intergenic Cip4 -,mRpS6 + chr3L 4364253 intergenic Cip4 -,mRpS6 + chr3L 4364356 intergenic mRpS6 +,Cip4 - chr3L_5_4360001 chr3L_4360001 RAL-853_125b 1851 chr3L 4607218 4607291 chr3L 4607359 4607432 30 141 6.5 14.0 10.2 2.7 214 chr3L 4607218 intron Src64B - chr3L 4607325 intron Src64B - chr3L 4607432 intron Src64B - chr3L_30_4605001 chr3L_4605001 RAL-853_125b 1852 chr3L 4754706 4754769 chr3L 4754832 4754895 22 126 3.0 6.0 4.5 4.0 189 chr3L 4754706 intron RhoGEF64C + chr3L 4754800 intron RhoGEF64C + chr3L 4754895 intron RhoGEF64C + chr3L_22_4750001 chr3L_4750001 RAL-853_125b 1853 chr3L 4824799 4824862 chr3L 4824937 4825000 6 138 4.5 0.0 2.2 1.9 201 chr3L 4824799 intron Dhc64C - chr3L 4824900 intron Dhc64C - chr3L 4825000 intron Dhc64C - chr3L_6_4820001 chr3L_4820001 RAL-853_125b 1854 chr3L 4858264 4858335 chr3L 4858403 4858462 32 137 10.0 13.5 11.8 2.5 198 chr3L 4858264 intergenic not near genes chr3L 4858363 intergenic not near genes chr3L 4858462 intergenic not near genes chr3L_32_4855001 chr3L_4855001 RAL-853_125b 1855 chr3L 4901088 4901147 chr3L 4907328 4907387 diver 22 6239 13.0 9.0 11.0 1.8 6299 chr3L 4901088 intergenic CG13704 + chr3L 4904238 intergenic not near genes chr3L 4907387 intergenic not near genes chr3L_22_4900001 chr3L_4900001 RAL-853_125b 1856 chr3L 4907929 4907933 chr3L 4908055 4908059 4 126 16.0 4.0 10.0 0.4 130 chr3L 4907929 intergenic not near genes chr3L 4907994 intergenic not near genes chr3L 4908059 intergenic not near genes chr3L_4_4905001 chr3L_4905001 RAL-853_125b 1857 chr3L 4926047 4926119 chr3L 4926176 4926248 30 127 6.0 7.5 6.8 3.8 201 chr3L 4926047 intergenic not near genes chr3L 4926148 intergenic not near genes chr3L 4926248 intergenic not near genes chr3L_30_4925001 chr3L_4925001 RAL-853_125b 1858 chr3L 4958375 4958443 chr3L 4958511 4958516 18 129 7.5 10.0 8.8 1.8 141 chr3L 4958375 intron Con - chr3L 4958446 intron Con - chr3L 4958516 intron Con - chr3L_18_4955001 chr3L_4955001 RAL-853_125b 1859 chr3L 5034136 5034182 chr3L 5043315 5043384 roo 14 9194 7.5 4.5 6.0 2.0 9248 chr3L 5034136 intron Con - chr3L 5038760 intron Con - chr3L 5043384 intron Con - chr3L_14_5035001 chr3L_5035001 RAL-853_125b 1860 chr3L 5045409 5045483 chr3L 5050240 5050314 Doc 14 4831 8.5 7.0 7.8 1.6 4905 chr3L 5045409 5` UTR Con - chr3L 5047862 intron Con - chr3L 5050314 intron Con - chr3L_14_5045001 chr3L_5045001 RAL-853_125b 1861 chr3L 5066255 5066308 chr3L 5066403 5066457 9 149 5.0 6.0 5.5 1.4 202 chr3L 5066255 intron Con - chr3L 5066356 intron Con - chr3L 5066457 intron Con - chr3L_9_5065001 chr3L_5065001 RAL-853_125b 1862 chr3L 5104432 5104506 chr3L 5124616 5124690 23 20184 8.0 7.0 7.5 2.7 20258 chr3L 5104432 intergenic not near genes chr3L 5114561 intergenic not near genes chr3L 5124690 intergenic not near genes chr3L_23_5110001 chr3L_5110001 RAL-853_125b 1863 chr3L 5225018 5225099 chr3L 5225180 5225250 5 161 0.0 3.5 1.8 1.8 232 chr3L 5225018 intron shep - chr3L 5225134 intron shep - chr3L 5225250 intron shep - chr3L_5_5225001 chr3L_5225001 RAL-853_125b 1864 chr3L 5228991 5229051 chr3L 5229461 5229522 14 471 5.0 7.0 6.0 2.0 531 chr3L 5228991 intron shep - chr3L 5229256 intron shep - chr3L 5229522 intron shep - chr3L_14_5225001 chr3L_5225001 RAL-853_125b 1865 chr3L 5251814 5251871 chr3L 5251943 5252000 13 129 8.5 8.0 8.2 1.4 186 chr3L 5251814 intron shep - chr3L 5251907 intron shep - chr3L 5252000 intron shep - chr3L_13_5250001 chr3L_5250001 RAL-853_125b 1866 chr3L 5306672 5306683 chr3L 5306811 5306822 4 139 0.0 0.5 0.2 3.3 150 chr3L 5306672 intergenic not near genes chr3L 5306747 intergenic not near genes chr3L 5306822 intergenic not near genes chr3L_4_5305001 chr3L_5305001 RAL-853_125b 1867 chr3L 5349366 5349438 chr3L 5349578 5349650 14 212 38.0 38.0 38.0 0.4 284 chr3L 5349366 intron lama - chr3L 5349508 intron lama - chr3L 5349650 intron lama - chr3L_14_5345001 chr3L_5345001 RAL-853_125b 1868 chr3L 5427314 5427372 chr3L 5427969 5428027 12 654 3.5 6.5 5.0 2.0 713 chr3L 5427314 intron CG34391 + chr3L 5427670 intron CG34391 + chr3L 5428027 intron CG34391 + chr3L_12_5425001 chr3L_5425001 RAL-853_125b 1869 chr3L 5458076 5458087 chr3L 5466661 5466738 Max-element 4 8632 10.0 5.0 7.5 0.5 8662 chr3L 5458076 intergenic not near genes chr3L 5462407 intergenic not near genes chr3L 5466738 intergenic not near genes chr3L_4_5460001 chr3L_5460001 RAL-853_125b 1870 chr3L 5482929 5483089 chr3L 5483158 5483193 8 177 0.0 6.5 3.2 1.9 264 chr3L 5482929 exon CG4835 + chr3L 5483061 exon CG4835 + chr3L 5483193 exon CG4835 + chr3L_8_5480001 chr3L_5480001 RAL-853_125b 1871 chr3L 5498341 5498421 chr3L 5498474 5498548 15 132 1.5 9.0 5.2 2.4 207 chr3L 5498341 exon blanks - chr3L 5498444 exon blanks - chr3L 5498548 exon blanks - chr3L_15_5495001 chr3L_5495001 RAL-853_125b 1872 chr3L 5521445 5521522 chr3L 5521584 5521635 31 137 8.0 6.0 7.0 3.9 190 chr3L 5521445 intron Lkr - chr3L 5521540 intron Lkr - chr3L 5521635 intron Lkr - chr3L_31_5520001 chr3L_5520001 RAL-853_125b 1873 chr3L 5537676 5537712 chr3L 5538068 5538104 jockey 9 392 15.0 6.0 10.5 0.8 428 chr3L 5537676 intergenic not near genes chr3L 5537890 intergenic not near genes chr3L 5538104 intergenic CG10625 - chr3L_9_5535001 chr3L_5535001 RAL-853_125b 1874 chr3L 5537714 5537744 chr3L 5538063 5538130 jockey 12 388 9.5 5.0 7.2 1.5 416 chr3L 5537714 intergenic not near genes chr3L 5537922 intergenic CG10625 - chr3L 5538130 intergenic CG10625 - chr3L_12_5535001 chr3L_5535001 RAL-853_125b 1875 chr3L 5561619 5561686 chr3L 5561751 5561818 8 132 4.0 4.0 4.0 1.6 199 chr3L 5561619 intergenic sinu -,Sucb - chr3L 5561718 3` UTR Sucb - chr3L 5561818 3` UTR Sucb - chr3L_8_5560001 chr3L_5560001 RAL-853_125b 1876 chr3L 5597782 5597832 chr3L 5597912 5597962 13 130 4.5 0.0 2.2 4.1 180 chr3L 5597782 intergenic CG5150 + chr3L 5597872 intergenic CG5150 + chr3L 5597962 intergenic not near genes chr3L_13_5595001 chr3L_5595001 RAL-853_125b 1877 chr3L 5613448 5613498 chr3L 5613625 5613675 16 177 9.0 6.0 7.5 1.9 227 chr3L 5613448 intergenic not near genes chr3L 5613562 intergenic not near genes chr3L 5613675 intergenic not near genes chr3L_16_5610001 chr3L_5610001 RAL-853_125b 1878 chr3L 5726831 5726860 chr3L 5726988 5727017 13 156 16.0 9.5 12.8 0.9 186 chr3L 5726831 intron sif + chr3L 5726924 intron sif + chr3L 5727017 intron sif + chr3L_13_5725001 chr3L_5725001 RAL-853_125b 1879 chr3L 5726862 5726893 chr3L 5726987 5727048 16 153 9.0 9.5 9.2 1.6 186 chr3L 5726862 intron sif + chr3L 5726955 intron sif + chr3L 5727048 intron sif + chr3L_16_5725001 chr3L_5725001 RAL-853_125b 1880 chr3L 5909989 5910058 chr3L 5910280 5910349 pogo 20 289 7.0 8.5 7.8 2.3 360 chr3L 5909989 intron CG13288 + chr3L 5910169 intron CG13288 + chr3L 5910349 intron CG13288 + chr3L_20_5910001 chr3L_5910001 RAL-853_125b 1881 chr3L 5926279 5926287 chr3L 5926519 5926527 5 239 17.0 10.0 13.5 0.3 248 chr3L 5926279 intron Vap-33B + chr3L 5926403 intron Vap-33B + chr3L 5926527 intron Vap-33B + chr3L_5_5925001 chr3L_5925001 RAL-853_125b 1882 chr3L 5926288 5926347 chr3L 5926518 5926542 BS 14 235 6.0 10.0 8.0 1.6 254 chr3L 5926288 intron Vap-33B + chr3L 5926415 intron Vap-33B + chr3L 5926542 intron Vap-33B + chr3L_14_5925001 chr3L_5925001 RAL-853_125b 1883 chr3L 5940035 5940079 chr3L 5940177 5940215 19 135 17.5 11.0 14.2 1.2 180 chr3L 5940035 intron CG33993 - chr3L 5940125 intron CG33993 - chr3L 5940215 intron CG33993 - chr3L_19_5940001 chr3L_5940001 RAL-853_125b 1884 chr3L 5940081 5940109 chr3L 5940174 5940190 11 120 9.5 9.5 9.5 1.0 109 chr3L 5940081 intron CG33993 - chr3L 5940136 intron CG33993 - chr3L 5940190 intron CG33993 - chr3L_11_5940001 chr3L_5940001 RAL-853_125b 1885 chr3L 6001645 6001648 chr3L 6004395 6004398 jockey 4 2750 12.0 2.0 7.0 0.5 2753 chr3L 6001645 intron PVRAP + chr3L 6003022 intron PVRAP + chr3L 6004398 intron PVRAP + chr3L_4_6000001 chr3L_6000001 RAL-853_125b 1886 chr3L 6001651 6001717 chr3L 6004389 6004467 jockey 13 2749 11.5 1.0 6.2 1.8 2816 chr3L 6001651 intron PVRAP + chr3L 6003059 intron PVRAP + chr3L 6004467 intron PVRAP + chr3L_13_6000001 chr3L_6000001 RAL-853_125b 1887 chr3L 6040315 6040377 chr3L 6042721 6042783 Doc 21 2405 7.0 5.0 6.0 3.0 2468 chr3L 6040315 intergenic Jon65Aiv + chr3L 6041549 intergenic not near genes chr3L 6042783 intergenic not near genes chr3L_21_6040001 chr3L_6040001 RAL-853_125b 1888 chr3L 6052088 6052147 chr3L 6052224 6052238 6 128 4.0 7.0 5.5 0.9 150 chr3L 6052088 intergenic Jon65Aii +,Jon65Aiii + chr3L 6052163 intergenic Jon65Aii +,Jon65Aiii + chr3L 6052238 intergenic Jon65Aii + chr3L_6_6050001 chr3L_6050001 RAL-853_125b 1889 chr3L 6052629 6052675 chr3L 6052739 6052750 12 117 14.0 16.5 15.2 0.7 121 chr3L 6052629 exon Jon65Aii + chr3L 6052690 intron Jon65Aii + chr3L 6052750 exon Jon65Aii + chr3L_12_6050001 chr3L_6050001 RAL-853_125b 1890 chr3L 6119132 6119172 chr3L 6119259 6119299 10 127 6.5 12.5 9.5 1.0 167 chr3L 6119132 exon Ets65A + chr3L 6119216 intron Ets65A + chr3L 6119299 intron Ets65A + chr3L_10_6115001 chr3L_6115001 RAL-853_125b 1891 chr3L 6155682 6155713 chr3L 6155818 6155849 14 136 6.0 0.0 3.0 3.5 167 chr3L 6155682 intergenic CR45421 - chr3L 6155766 intergenic not near genes chr3L 6155849 intergenic not near genes chr3L_14_6155001 chr3L_6155001 RAL-853_125b 1892 chr3L 6169082 6169135 chr3L 6169211 6169264 13 129 10.5 11.0 10.8 1.1 182 chr3L 6169082 3` UTR CG10289 - chr3L 6169173 3` UTR CG10289 - chr3L 6169264 3` UTR CG10289 - chr3L_13_6165001 chr3L_6165001 RAL-853_125b 1893 chr3L 6220876 6220941 chr3L 6230072 6230143 roo 21 9201 10.5 9.5 10.0 1.9 9267 chr3L 6220876 5` UTR pncr008:3L + chr3L 6225510 intergenic not near genes chr3L 6230143 intergenic not near genes chr3L_21_6225001 chr3L_6225001 RAL-853_125b 1894 chr3L 6278164 6278233 chr3L 6278290 6278339 13 122 2.5 0.0 1.2 5.9 175 chr3L 6278164 intergenic not near genes chr3L 6278252 intergenic not near genes chr3L 6278339 intergenic not near genes chr3L_13_6275001 chr3L_6275001 RAL-853_125b 1895 chr3L 6334983 6335033 chr3L 6335492 6335554 297 18 519 6.0 7.0 6.5 2.4 571 chr3L 6334983 intron CG13300 - chr3L 6335268 intron CG13300 - chr3L 6335554 intron CG13300 - chr3L_18_6335001 chr3L_6335001 RAL-853_125b 1896 chr3L 6388796 6388857 chr3L 6388941 6388983 18 138 7.5 5.0 6.2 2.5 187 chr3L 6388796 intergenic not near genes chr3L 6388890 intergenic not near genes chr3L 6388983 intergenic not near genes chr3L_18_6385001 chr3L_6385001 RAL-853_125b 1897 chr3L 6405618 6405679 chr3L 6432132 6432193 roo 11 26513 8.0 5.0 6.5 1.5 26575 chr3L 6405618 intron CG42747 + chr3L 6418906 intron CG42747 + chr3L 6432193 intron CG42747 + chr3L_11_6415001 chr3L_6415001 RAL-853_125b 1898 chr3L 6456304 6456316 chr3L 6456438 6456450 4 134 11.0 17.0 14.0 0.3 146 chr3L 6456304 intron CG42747 + chr3L 6456377 intron CG42747 + chr3L 6456450 intron CG42747 + chr3L_4_6455001 chr3L_6455001 RAL-853_125b 1899 chr3L 6498665 6498676 chr3L 6498800 6498811 4 135 6.5 5.0 5.8 0.6 146 chr3L 6498665 intron sfl + chr3L 6498738 intron sfl + chr3L 6498811 intron sfl + chr3L_4_6495001 chr3L_6495001 RAL-853_125b 1900 chr3L 6512223 6512289 chr3L 6512348 6512378 8 126 3.5 5.5 4.5 1.5 155 chr3L 6512223 intron sfl + chr3L 6512300 intron sfl + chr3L 6512378 intron sfl + chr3L_8_6510001 chr3L_6510001 RAL-853_125b 1901 chr3L 6562832 6562861 chr3L 6562962 6562991 7 130 4.0 14.0 9.0 0.7 159 chr3L 6562832 intron CG18769 + chr3L 6562912 intron CG18769 + chr3L 6562991 intron CG18769 + chr3L_7_6560001 chr3L_6560001 RAL-853_125b 1902 chr3L 6575494 6575572 chr3L 6575703 6575781 25 208 5.5 7.5 6.5 3.3 287 chr3L 6575494 intron,intron CG18769 +,jv - chr3L 6575638 intron,intron CG18769 +,jv - chr3L 6575781 intron,intron CG18769 +,jv - chr3L_25_6575001 chr3L_6575001 RAL-853_125b 1903 chr3L 6589629 6589647 chr3L 6590010 6590025 9 384 15.5 13.5 14.5 0.6 396 chr3L 6589629 intron CG18769 + chr3L 6589827 intron CG18769 + chr3L 6590025 intron CG18769 + chr3L_9_6585001 chr3L_6585001 RAL-853_125b 1904 chr3L 6589648 6589677 chr3L 6590008 6590008 15 371 13.0 12.0 12.5 1.1 360 chr3L 6589648 intron CG18769 + chr3L 6589828 intron CG18769 + chr3L 6590008 intron CG18769 + chr3L_15_6585001 chr3L_6585001 RAL-853_125b 1905 chr3L 6620569 6620600 chr3L 6621059 6621090 Rt1c 20 489 12.0 21.0 16.5 1.1 521 chr3L 6620569 intergenic not near genes chr3L 6620830 intergenic not near genes chr3L 6621090 intergenic not near genes chr3L_20_6620001 chr3L_6620001 RAL-853_125b 1906 chr3L 6639945 6639947 chr3L 6640051 6640073 5 117 1.5 8.0 4.8 0.9 128 chr3L 6639945 intergenic not near genes chr3L 6640009 intergenic not near genes chr3L 6640073 intergenic not near genes chr3L_5_6640001 chr3L_6640001 RAL-853_125b 1907 chr3L 6652033 6652109 chr3L 6652161 6652237 37 127 6.0 8.0 7.0 4.6 204 chr3L 6652033 intergenic not near genes chr3L 6652135 intergenic not near genes chr3L 6652237 intergenic not near genes chr3L_37_6650001 chr3L_6650001 RAL-853_125b 1908 chr3L 6657402 6657451 chr3L 6657603 6657653 18 199 15.5 7.5 11.5 1.4 251 chr3L 6657402 intergenic not near genes chr3L 6657528 intergenic not near genes chr3L 6657653 intergenic not near genes chr3L_18_6655001 chr3L_6655001 RAL-853_125b 1909 chr3L 6657454 6657468 chr3L 6657600 6657670 7 189 12.5 7.5 10.0 0.6 216 chr3L 6657454 intergenic not near genes chr3L 6657562 intergenic not near genes chr3L 6657670 intergenic not near genes chr3L_7_6655001 chr3L_6655001 RAL-853_125b 1910 chr3L 6726796 6726824 chr3L 6726922 6726950 14 125 0.0 5.0 2.5 4.0 154 chr3L 6726796 intergenic not near genes chr3L 6726873 intergenic not near genes chr3L 6726950 intergenic not near genes chr3L_14_6725001 chr3L_6725001 RAL-853_125b 1911 chr3L 6781077 6781152 chr3L 6783140 6783212 Doc 16 2061 4.5 0.0 2.2 5.0 2135 chr3L 6781077 intergenic not near genes chr3L 6782144 intergenic not near genes chr3L 6783212 intergenic not near genes chr3L_16_6780001 chr3L_6780001 RAL-853_125b 1912 chr3L 6807498 6807538 chr3L 6807738 6807778 19 240 11.5 7.5 9.5 1.8 280 chr3L 6807498 intergenic not near genes chr3L 6807638 intergenic not near genes chr3L 6807778 intergenic not near genes chr3L_19_6805001 chr3L_6805001 RAL-853_125b 1913 chr3L 6808850 6808916 chr3L 6809353 6809426 18 512 6.5 8.0 7.2 2.2 576 chr3L 6808850 intergenic not near genes chr3L 6809138 intergenic not near genes chr3L 6809426 intergenic not near genes chr3L_18_6805001 chr3L_6805001 RAL-853_125b 1914 chr3L 6833463 6833476 chr3L 6833600 6833613 8 137 16.5 6.0 11.2 0.7 150 chr3L 6833463 intergenic not near genes chr3L 6833538 intergenic not near genes chr3L 6833613 intergenic not near genes chr3L_8_6830001 chr3L_6830001 RAL-853_125b 1915 chr3L 6835882 6835920 chr3L 6836010 6836048 12 128 8.0 8.5 8.2 1.3 166 chr3L 6835882 intergenic not near genes chr3L 6835965 intergenic not near genes chr3L 6836048 intergenic not near genes chr3L_12_6835001 chr3L_6835001 RAL-853_125b 1916 chr3L 6844321 6844384 chr3L 6844517 6844580 20 195 5.5 7.0 6.2 2.8 259 chr3L 6844321 intergenic not near genes chr3L 6844450 intergenic not near genes chr3L 6844580 intergenic not near genes chr3L_20_6840001 chr3L_6840001 RAL-853_125b 1917 chr3L 6855884 6855946 chr3L 6860718 6860780 Doc 20 4833 6.5 8.5 7.5 2.4 4896 chr3L 6855884 intergenic not near genes chr3L 6858332 intergenic not near genes chr3L 6860780 intergenic not near genes chr3L_20_6855001 chr3L_6855001 RAL-853_125b 1918 chr3L 6865411 6865413 chr3L 6865542 6865544 4 131 10.5 1.5 6.0 0.6 133 chr3L 6865411 intergenic CR45115 - chr3L 6865478 3` UTR CR45115 - chr3L 6865544 3` UTR CR45115 - chr3L_4_6865001 chr3L_6865001 RAL-853_125b 1919 chr3L 6868673 6868738 chr3L 6868801 6868866 16 128 0.0 4.5 2.2 5.0 193 chr3L 6868673 intergenic not near genes chr3L 6868770 intergenic not near genes chr3L 6868866 intergenic not near genes chr3L_16_6865001 chr3L_6865001 RAL-853_125b 1920 chr3L 6887474 6887538 chr3L 6895016 6895080 roo 24 7541 7.0 6.5 6.8 3.1 7606 chr3L 6887474 intergenic not near genes chr3L 6891277 intergenic not near genes chr3L 6895080 intergenic not near genes chr3L_24_6890001 chr3L_6890001 RAL-853_125b 1921 chr3L 6898662 6898714 chr3L 6898850 6898902 11 188 3.0 9.5 6.2 1.5 240 chr3L 6898662 intergenic not near genes chr3L 6898782 intergenic not near genes chr3L 6898902 intergenic not near genes chr3L_11_6895001 chr3L_6895001 RAL-853_125b 1922 chr3L 6907968 6908047 chr3L 6908103 6908175 35 129 4.0 1.0 2.5 10.0 207 chr3L 6907968 intergenic not near genes chr3L 6908072 intergenic not near genes chr3L 6908175 intergenic not near genes chr3L_35_6905001 chr3L_6905001 RAL-853_125b 1923 chr3L 6934330 6934352 chr3L 6934491 6934513 9 161 6.5 2.0 4.2 1.7 183 chr3L 6934330 exon CG14820 + chr3L 6934422 intron CG14820 + chr3L 6934513 exon CG14820 + chr3L_9_6930001 chr3L_6930001 RAL-853_125b 1924 chr3L 6942030 6942058 chr3L 6942179 6942207 4 149 26.0 22.5 24.2 0.2 177 chr3L 6942030 intergenic not near genes chr3L 6942118 intergenic not near genes chr3L 6942207 intergenic not near genes chr3L_4_6940001 chr3L_6940001 RAL-853_125b 1925 chr3L 6968331 6968373 chr3L 6968458 6968500 18 127 9.5 8.0 8.8 1.8 169 chr3L 6968331 exon Mis12 - chr3L 6968416 intron Mis12 - chr3L 6968500 intron Mis12 - chr3L_18_6965001 chr3L_6965001 RAL-853_125b 1926 chr3L 6974442 6974516 chr3L 6974593 6974667 17 150 6.5 6.5 6.5 2.3 225 chr3L 6974442 exon Galphai - chr3L 6974554 intron Galphai - chr3L 6974667 intron Galphai - chr3L_17_6970001 chr3L_6970001 RAL-853_125b 1927 chr3L 6994845 6994915 chr3L 6995496 6995575 BS 20 657 0.0 10.5 5.2 3.2 730 chr3L 6994845 intergenic bin + chr3L 6995210 intergenic not near genes chr3L 6995575 intergenic not near genes chr3L_20_6995001 chr3L_6995001 RAL-853_125b 1928 chr3L 6990903 6990977 chr3L 6998289 6998363 5 7386 47.5 43.5 45.5 0.1 7460 chr3L 6990903 exon bin + chr3L 6994633 intergenic bin + chr3L 6998363 intergenic Mp + chr3L_5_6990001 chr3L_6990001 RAL-853_125b 1929 chr3L 7001938 7001974 chr3L 7002109 7002145 7 171 8.5 4.0 6.2 1.0 207 chr3L 7001938 intron Mp + chr3L 7002042 intron Mp + chr3L 7002145 intron Mp + chr3L_7_7000001 chr3L_7000001 RAL-853_125b 1930 chr3L 7013408 7013443 chr3L 7013546 7013596 7 144 9.0 0.0 4.5 1.3 188 chr3L 7013408 intron Mp + chr3L 7013502 intron Mp + chr3L 7013596 intron Mp + chr3L_7_7010001 chr3L_7010001 RAL-853_125b 1931 chr3L 7041877 7041888 chr3L 7042004 7042015 6 126 13.5 9.0 11.2 0.5 138 chr3L 7041877 intron Mp + chr3L 7041946 intron Mp + chr3L 7042015 intron Mp + chr3L_6_7040001 chr3L_7040001 RAL-853_125b 1932 chr3L 7041891 7041925 chr3L 7042003 7042052 19 126 7.5 8.5 8.0 2.1 161 chr3L 7041891 intron Mp + chr3L 7041972 intron Mp + chr3L 7042052 intron Mp + chr3L_19_7040001 chr3L_7040001 RAL-853_125b 1933 chr3L 7061358 7061405 chr3L 7061494 7061541 22 136 7.5 6.5 7.0 2.8 183 chr3L 7061358 intron CG8641 - chr3L 7061450 intron CG8641 - chr3L 7061541 intron CG8641 - chr3L_22_7060001 chr3L_7060001 RAL-853_125b 1934 chr3L 7104899 7104966 chr3L 7105048 7105104 6 140 6.5 0.0 3.2 1.4 205 chr3L 7104899 intron form3 + chr3L 7105002 intron form3 + chr3L 7105104 intron form3 + chr3L_6_7105001 chr3L_7105001 RAL-853_125b 1935 chr3L 7112540 7112606 chr3L 7112673 7112743 23 136 9.0 6.0 7.5 2.7 203 chr3L 7112540 intron form3 + chr3L 7112642 intron form3 + chr3L 7112743 intron form3 + chr3L_23_7110001 chr3L_7110001 RAL-853_125b 1936 chr3L 7129913 7129959 chr3L 7130155 7130179 BS 11 240 0.0 6.0 3.0 2.8 266 chr3L 7129913 intergenic CG15829 + chr3L 7130046 intergenic CG15829 + chr3L 7130179 intergenic not near genes chr3L_11_7130001 chr3L_7130001 RAL-853_125b 1937 chr3L 7150016 7150040 chr3L 7150145 7150169 12 129 1.5 14.0 7.8 1.4 153 chr3L 7150016 intron corn - chr3L 7150092 intron corn - chr3L 7150169 intron corn - chr3L_12_7150001 chr3L_7150001 RAL-853_125b 1938 chr3L 7187382 7187421 chr3L 7187514 7187553 5 132 0.0 0.0 0.0 5.0 171 chr3L 7187382 intron Dscam2 - chr3L 7187468 intron Dscam2 - chr3L 7187553 intron Dscam2 - chr3L_5_7185001 chr3L_7185001 RAL-853_125b 1939 chr3L 7244890 7244929 chr3L 7245032 7245071 12 140 16.0 12.0 14.0 0.8 181 chr3L 7244890 exon mei-P22 + chr3L 7244980 exon mei-P22 + chr3L 7245071 exon mei-P22 + chr3L_12_7240001 chr3L_7240001 RAL-853_125b 1940 chr3L 7244933 7244962 chr3L 7245029 7245069 13 126 10.5 11.5 11.0 1.1 136 chr3L 7244933 exon mei-P22 + chr3L 7245001 exon mei-P22 + chr3L 7245069 exon mei-P22 + chr3L_13_7240001 chr3L_7240001 RAL-853_125b 1941 chr3L 7264821 7264887 chr3L 7264967 7265020 7 142 0.0 3.5 1.8 2.5 199 chr3L 7264821 intergenic not near genes chr3L 7264920 intergenic not near genes chr3L 7265020 intergenic not near genes chr3L_7_7260001 chr3L_7260001 RAL-853_125b 1942 chr3L 7277064 7277131 chr3L 7277216 7277283 26 152 10.5 8.5 9.5 2.5 219 chr3L 7277064 exon unc-13-4A - chr3L 7277174 intron unc-13-4A - chr3L 7277283 intron unc-13-4A - chr3L_26_7275001 chr3L_7275001 RAL-853_125b 1943 chr3L 7285401 7285460 chr3L 7285529 7285588 13 128 1.0 5.0 3.0 3.2 187 chr3L 7285401 intron unc-13-4A - chr3L 7285494 intron unc-13-4A - chr3L 7285588 intron unc-13-4A - chr3L_13_7285001 chr3L_7285001 RAL-853_125b 1944 chr3L 7308140 7308216 chr3L 7308266 7308342 26 125 4.0 1.5 2.8 6.8 202 chr3L 7308140 intron unc-13-4A - chr3L 7308241 intron unc-13-4A - chr3L 7308342 intron unc-13-4A - chr3L_26_7305001 chr3L_7305001 RAL-853_125b 1945 chr3L 7316974 7316978 chr3L 7317342 7317347 4 369 9.0 2.0 5.5 0.6 373 chr3L 7316974 intergenic not near genes chr3L 7317160 intergenic not near genes chr3L 7317347 intergenic not near genes chr3L_4_7315001 chr3L_7315001 RAL-853_125b 1946 chr3L 7377271 7377339 chr3L 7380426 7380494 297 35 3154 7.5 8.5 8.0 3.9 3223 chr3L 7377271 intron SMSr - chr3L 7378882 intron SMSr - chr3L 7380494 intron SMSr - chr3L_35_7375001 chr3L_7375001 RAL-853_125b 1947 chr3L 7403585 7403635 chr3L 7403714 7403762 6 128 27.5 27.5 27.5 0.2 177 chr3L 7403585 exon CG8560 - chr3L 7403674 intron CG8560 - chr3L 7403762 intron CG8560 - chr3L_6_7400001 chr3L_7400001 RAL-853_125b 1948 chr3L 7408178 7408232 chr3L 7408311 7408366 7 132 20.0 26.0 23.0 0.3 188 chr3L 7408178 intergenic CR44525 - chr3L 7408272 intergenic CR44525 - chr3L 7408366 intergenic CR44525 - chr3L_7_7405001 chr3L_7405001 RAL-853_125b 1949 chr3L 7422843 7422907 chr3L 7422979 7423043 11 136 10.5 8.5 9.5 1.0 200 chr3L 7422843 intergenic not near genes chr3L 7422943 intergenic not near genes chr3L 7423043 intergenic not near genes chr3L_11_7420001 chr3L_7420001 RAL-853_125b 1950 chr3L 7436094 7436144 chr3L 7436213 7436272 9 120 12.5 14.5 13.5 0.6 178 chr3L 7436094 intron CG42458 + chr3L 7436183 intron CG42458 + chr3L 7436272 intron CG42458 + chr3L_9_7435001 chr3L_7435001 RAL-853_125b 1951 chr3L 7461658 7461696 chr3L 7461810 7461848 5 152 24.5 20.5 22.5 0.2 190 chr3L 7461658 intergenic not near genes chr3L 7461753 intergenic not near genes chr3L 7461848 intergenic not near genes chr3L_5_7460001 chr3L_7460001 RAL-853_125b 1952 chr3L 7488829 7488891 chr3L 7488960 7489022 7 130 25.0 25.0 25.0 0.3 193 chr3L 7488829 intergenic not near genes chr3L 7488926 intergenic not near genes chr3L 7489022 intergenic not near genes chr3L_7_7485001 chr3L_7485001 RAL-853_125b 1953 chr3L 7498691 7498765 chr3L 7503537 7503593 F-element 23 4840 9.0 9.0 9.0 2.3 4902 chr3L 7498691 5` UTR CG8539 - chr3L 7501142 intergenic not near genes chr3L 7503593 intergenic not near genes chr3L_23_7500001 chr3L_7500001 RAL-853_125b 1954 chr3L 7505368 7505442 chr3L 7505494 7505563 26 126 6.5 6.0 6.2 3.6 195 chr3L 7505368 intergenic CG7548 - chr3L 7505466 intergenic CG7548 - chr3L 7505563 3` UTR CG7548 - chr3L_26_7505001 chr3L_7505001 RAL-853_125b 1955 chr3L 7560306 7560365 chr3L 7560595 7560654 8 289 29.0 26.5 27.8 0.3 348 chr3L 7560306 intergenic CG14837 - chr3L 7560480 intergenic CG14837 - chr3L 7560654 intergenic not near genes chr3L_8_7560001 chr3L_7560001 RAL-853_125b 1956 chr3L 7574796 7574860 chr3L 7574936 7574987 7 134 0.0 1.5 0.8 3.9 191 chr3L 7574796 intergenic not near genes chr3L 7574892 intergenic not near genes chr3L 7574987 intergenic not near genes chr3L_7_7570001 chr3L_7570001 RAL-853_125b 1957 chr3L 7576169 7576244 chr3L 7576307 7576382 47 137 5.5 7.5 6.5 6.3 213 chr3L 7576169 intergenic not near genes chr3L 7576276 intergenic not near genes chr3L 7576382 intergenic not near genes chr3L_47_7575001 chr3L_7575001 RAL-853_125b 1958 chr3L 7581583 7581646 chr3L 7581711 7581780 15 133 23.0 18.0 20.5 0.7 197 chr3L 7581583 intergenic not near genes chr3L 7581682 intergenic not near genes chr3L 7581780 intergenic not near genes chr3L_15_7580001 chr3L_7580001 RAL-853_125b 1959 chr3L 7593659 7593661 chr3L 7593800 7593802 4 141 31.5 21.5 26.5 0.1 143 chr3L 7593659 intron CG33275 + chr3L 7593730 intron CG33275 + chr3L 7593802 intron CG33275 + chr3L_4_7590001 chr3L_7590001 RAL-853_125b 1960 chr3L 7593672 7593739 chr3L 7593799 7593880 12 140 23.0 21.5 22.2 0.5 208 chr3L 7593672 intron CG33275 + chr3L 7593776 intron CG33275 + chr3L 7593880 intron CG33275 + chr3L_12_7590001 chr3L_7590001 RAL-853_125b 1961 chr3L 7617645 7617656 chr3L 7617804 7617815 4 157 26.0 19.5 22.8 0.2 170 chr3L 7617645 intron CG33275 + chr3L 7617730 intron CG33275 + chr3L 7617815 intron CG33275 + chr3L_4_7615001 chr3L_7615001 RAL-853_125b 1962 chr3L 7691791 7691861 chr3L 7691933 7692005 9 142 22.5 21.0 21.8 0.4 214 chr3L 7691791 intron,intron,intron CG32373 +,Ank2 -,CG44195 - chr3L 7691898 intron,intron,intron CG32373 +,Ank2 -,CG44195 - chr3L 7692005 intron,intron,intron CG32373 +,Ank2 -,CG44195 - chr3L_9_7690001 chr3L_7690001 RAL-853_125b 1963 chr3L 7707478 7707531 chr3L 7707611 7707664 14 132 29.5 29.0 29.2 0.5 186 chr3L 7707478 intron,intron CG32373 +,Ank2 - chr3L 7707571 intron,intron CG32373 +,Ank2 - chr3L 7707664 intron,exon CG32373 +,Ank2 - chr3L_14_7705001 chr3L_7705001 RAL-853_125b 1964 chr3L 7751271 7751324 chr3L 7751398 7751451 10 125 30.0 30.0 30.0 0.3 180 chr3L 7751271 intron CG32373 + chr3L 7751361 intron CG32373 + chr3L 7751451 intron CG32373 + chr3L_10_7750001 chr3L_7750001 RAL-853_125b 1965 chr3L 7760034 7760059 chr3L 7760159 7760185 4 126 24.0 16.5 20.2 0.2 151 chr3L 7760034 intergenic Hn + chr3L 7760110 intergenic Hn + chr3L 7760185 intergenic Hn + chr3L_4_7760001 chr3L_7760001 RAL-853_125b 1966 chr3L 7791246 7791285 chr3L 7791584 7791623 6 338 12.5 13.5 13.0 0.4 377 chr3L 7791246 intron CG32369 - chr3L 7791434 intron CG32369 - chr3L 7791623 intron CG32369 - chr3L_6_7790001 chr3L_7790001 RAL-853_125b 1967 chr3L 7793669 7793734 chr3L 7800771 7800836 297 35 7102 11.0 11.0 11.0 2.9 7167 chr3L 7793669 intron CG32369 - chr3L 7797252 intron CG32369 - chr3L 7800836 intron CG32369 - chr3L_35_7795001 chr3L_7795001 RAL-853_125b 1968 chr3L 7822248 7822305 chr3L 7822396 7822453 5 148 17.5 14.0 15.8 0.3 205 chr3L 7822248 intron Pdp1 - chr3L 7822350 intron Pdp1 - chr3L 7822453 intron Pdp1 - chr3L_5_7820001 chr3L_7820001 RAL-853_125b 1969 chr3L 7843117 7843160 chr3L 7843259 7843302 6 142 14.5 15.0 14.8 0.4 185 chr3L 7843117 intron Pdp1 - chr3L 7843210 intron Pdp1 - chr3L 7843302 intron Pdp1 - chr3L_6_7840001 chr3L_7840001 RAL-853_125b 1970 chr3L 7869620 7869629 chr3L 7869750 7869759 6 130 25.5 14.5 20.0 0.3 139 chr3L 7869620 exon CG32365 + chr3L 7869690 exon CG32365 + chr3L 7869759 exon CG32365 + chr3L_6_7865001 chr3L_7865001 RAL-853_125b 1971 chr3L 7883703 7883722 chr3L 7883910 7883929 4 207 17.5 8.0 12.8 0.3 226 chr3L 7883703 intron CG32365 + chr3L 7883816 intron CG32365 + chr3L 7883929 intron CG32365 + chr3L_4_7880001 chr3L_7880001 RAL-853_125b 1972 chr3L 7886459 7886538 chr3L 7889031 7889106 Stalker4 14 2566 7.0 7.5 7.2 1.7 2647 chr3L 7886459 intron CG32365 + chr3L 7887782 intron CG32365 + chr3L 7889106 intron CG32365 + chr3L_14_7885001 chr3L_7885001 RAL-853_125b 1973 chr3L 7916785 7916850 chr3L 7926006 7926071 roo 20 9219 4.5 6.0 5.2 3.2 9286 chr3L 7916785 3` UTR syd - chr3L 7921428 intron syd - chr3L 7926071 3` UTR syd - chr3L_20_7920001 chr3L_7920001 RAL-853_125b 1974 chr3L 7956448 7956476 chr3L 7956576 7956604 7 128 16.5 19.5 18.0 0.4 156 chr3L 7956448 intergenic not near genes chr3L 7956526 intergenic not near genes chr3L 7956604 intergenic not near genes chr3L_7_7955001 chr3L_7955001 RAL-853_125b 1975 chr3L 7985326 7985384 chr3L 7987704 7987762 NOF 17 2378 10.0 9.5 9.8 1.6 2436 chr3L 7985326 intron nmo + chr3L 7986544 intron nmo + chr3L 7987762 intron nmo + chr3L_17_7985001 chr3L_7985001 RAL-853_125b 1976 chr3L 7997569 7997623 chr3L 7997699 7997754 8 131 18.0 17.5 17.8 0.4 185 chr3L 7997569 intron nmo + chr3L 7997662 intron nmo + chr3L 7997754 intron nmo + chr3L_8_7995001 chr3L_7995001 RAL-853_125b 1977 chr3L 8019655 8019733 chr3L 8024119 8024199 NOF 10 4461 3.0 5.5 4.2 1.9 4544 chr3L 8019655 intron nmo + chr3L 8021927 intron nmo + chr3L 8024199 intron nmo + chr3L_10_8020001 chr3L_8020001 RAL-853_125b 1978 chr3L 8026570 8026627 chr3L 8026698 8026757 11 126 12.0 12.5 12.2 0.8 187 chr3L 8026570 intron nmo + chr3L 8026664 intron nmo + chr3L 8026757 intron nmo + chr3L_11_8025001 chr3L_8025001 RAL-853_125b 1979 chr3L 8056234 8056291 chr3L 8056965 8057022 7 731 38.5 38.5 38.5 0.2 788 chr3L 8056234 intron bip1 - chr3L 8056628 intron bip1 - chr3L 8057022 intron bip1 - chr3L_7_8055001 chr3L_8055001 RAL-853_125b 1980 chr3L 8062798 8062843 chr3L 8062926 8062971 7 128 9.5 10.5 10.0 0.6 173 chr3L 8062798 intergenic not near genes chr3L 8062884 intergenic not near genes chr3L 8062971 intergenic not near genes chr3L_7_8060001 chr3L_8060001 RAL-853_125b 1981 chr3L 8064566 8064633 chr3L 8064830 8064868 8 262 14.0 18.0 16.0 0.5 302 chr3L 8064566 intron Ect4 + chr3L 8064717 intron Ect4 + chr3L 8064868 intron Ect4 + chr3L_8_8060001 chr3L_8060001 RAL-853_125b 1982 chr3L 8065602 8065634 chr3L 8065754 8065786 4 152 17.5 11.5 14.5 0.3 184 chr3L 8065602 intron Ect4 + chr3L 8065694 intron Ect4 + chr3L 8065786 intron Ect4 + chr3L_4_8065001 chr3L_8065001 RAL-853_125b 1983 chr3L 8076638 8076705 chr3L 8076771 8076838 30 133 28.0 21.0 24.5 1.2 200 chr3L 8076638 intron Ect4 + chr3L 8076738 intron Ect4 + chr3L 8076838 intron Ect4 + chr3L_30_8075001 chr3L_8075001 RAL-853_125b 1984 chr3L 8165920 8165987 chr3L 8166054 8166121 9 134 10.0 10.5 10.2 0.8 201 chr3L 8165920 intergenic CG13675 - chr3L 8166020 intergenic not near genes chr3L 8166121 intergenic not near genes chr3L_9_8165001 chr3L_8165001 RAL-853_125b 1985 chr3L 8210760 8210802 chr3L 8210925 8210967 11 165 12.0 13.5 12.8 0.8 207 chr3L 8210760 intergenic CG32364 - chr3L 8210864 intergenic CG32364 - chr3L 8210967 intergenic CG32364 - chr3L_11_8210001 chr3L_8210001 RAL-853_125b 1986 chr3L 8214687 8214753 chr3L 8214823 8214889 18 136 18.0 18.5 18.2 0.9 202 chr3L 8214687 intergenic not near genes chr3L 8214788 intergenic CG8012 + chr3L 8214889 intergenic CG8012 + chr3L_18_8210001 chr3L_8210001 RAL-853_125b 1987 chr3L 8233542 8233584 chr3L 8238853 8238896 Rt1a 16 5312 10.5 9.5 10.0 1.5 5354 chr3L 8233542 intron CG7213 - chr3L 8236219 intron CG7213 - chr3L 8238896 intron,intron CG7213 -,Dscam4 + chr3L_16_8235001 chr3L_8235001 RAL-853_125b 1988 chr3L 8248275 8248333 chr3L 8248415 8248473 8 140 11.0 19.0 15.0 0.5 198 chr3L 8248275 intron Dscam4 + chr3L 8248374 intron Dscam4 + chr3L 8248473 intron Dscam4 + chr3L_8_8245001 chr3L_8245001 RAL-853_125b 1989 chr3L 8256020 8256064 chr3L 8256141 8256167 12 123 13.0 9.0 11.0 1.0 147 chr3L 8256020 intron Dscam4 + chr3L 8256094 intron Dscam4 + chr3L 8256167 intron Dscam4 + chr3L_12_8255001 chr3L_8255001 RAL-853_125b 1990 chr3L 8274790 8274800 chr3L 8274952 8274964 6 164 17.0 0.0 8.5 0.6 174 chr3L 8274790 intron Dscam4 + chr3L 8274877 intron Dscam4 + chr3L 8274964 intron Dscam4 + chr3L_6_8270001 chr3L_8270001 RAL-853_125b 1991 chr3L 8295748 8295817 chr3L 8295956 8296025 25 208 5.0 11.5 8.2 2.7 277 chr3L 8295748 intergenic CG7201 - chr3L 8295886 intergenic not near genes chr3L 8296025 intergenic not near genes chr3L_25_8295001 chr3L_8295001 RAL-853_125b 1992 chr3L 8364480 8364532 chr3L 8364621 8364673 12 140 21.0 18.0 19.5 0.6 193 chr3L 8364480 intergenic not near genes chr3L 8364576 intergenic not near genes chr3L 8364673 intergenic not near genes chr3L_12_8360001 chr3L_8360001 RAL-853_125b 1993 chr3L 8369872 8369909 chr3L 8369999 8370036 6 127 18.5 22.5 20.5 0.3 164 chr3L 8369872 intergenic not near genes chr3L 8369954 intergenic not near genes chr3L 8370036 intergenic not near genes chr3L_6_8365001 chr3L_8365001 RAL-853_125b 1994 chr3L 8443518 8443582 chr3L 8443649 8443714 20 132 4.5 7.0 5.8 2.9 196 chr3L 8443518 3` UTR CG6983 - chr3L 8443616 3` UTR CG6983 - chr3L 8443714 3` UTR CG6983 - chr3L_20_8440001 chr3L_8440001 RAL-853_125b 1995 chr3L 8456453 8456484 chr3L 8456571 8456611 4 123 23.0 26.5 24.8 0.2 158 chr3L 8456453 intron Gug + chr3L 8456532 intron Gug + chr3L 8456611 intron Gug + chr3L_4_8455001 chr3L_8455001 RAL-853_125b 1996 chr3L 8481755 8481796 chr3L 8490932 8491005 roo 24 9189 15.5 10.0 12.8 1.7 9250 chr3L 8481755 intron CG43163 - chr3L 8486380 intron CG43163 - chr3L 8491005 intron CG43163 - chr3L_24_8485001 chr3L_8485001 RAL-853_125b 1997 chr3L 8498258 8498316 chr3L 8505775 8505833 blood 21 7517 9.0 8.0 8.5 2.2 7575 chr3L 8498258 intron CG43163 - chr3L 8502046 intron CG43163 - chr3L 8505833 intron CG43163 - chr3L_21_8500001 chr3L_8500001 RAL-853_125b 1998 chr3L 8540677 8540732 chr3L 8540796 8540853 5 124 19.0 22.5 20.8 0.2 176 chr3L 8540677 intergenic not near genes chr3L 8540765 intergenic not near genes chr3L 8540853 intergenic not near genes chr3L_5_8540001 chr3L_8540001 RAL-853_125b 1999 chr3L 8579808 8579871 chr3L 8579938 8580001 16 126 29.0 27.5 28.2 0.5 193 chr3L 8579808 intron CG43078 + chr3L 8579904 intron CG43078 + chr3L 8580001 intron CG43078 + chr3L_16_8575001 chr3L_8575001 RAL-853_125b 2000 chr3L 8582896 8582972 chr3L 8583027 8583103 10 131 19.5 16.0 17.8 0.5 207 chr3L 8582896 intron CG43078 + chr3L 8583000 intron CG43078 + chr3L 8583103 intron CG43078 + chr3L_10_8580001 chr3L_8580001 RAL-853_125b 2001 chr3L 8643538 8643600 chr3L 8643664 8643726 15 126 15.5 17.5 16.5 0.9 188 chr3L 8643538 3` UTR Cpr66D + chr3L 8643632 intergenic Cpr66D + chr3L 8643726 intergenic Cpr66D + chr3L_15_8640001 chr3L_8640001 RAL-853_125b 2002 chr3L 8664303 8664350 chr3L 8664480 8664527 7 175 23.5 30.0 26.8 0.3 224 chr3L 8664303 intergenic not near genes chr3L 8664415 intergenic not near genes chr3L 8664527 intergenic not near genes chr3L_7_8660001 chr3L_8660001 RAL-853_125b 2003 chr3L 8697250 8697274 chr3L 8697380 8697404 5 130 25.5 24.0 24.8 0.2 154 chr3L 8697250 intergenic not near genes chr3L 8697327 intergenic not near genes chr3L 8697404 intergenic not near genes chr3L_5_8695001 chr3L_8695001 RAL-853_125b 2004 chr3L 8721157 8721212 chr3L 8721305 8721363 27 149 55.5 44.0 49.8 0.5 206 chr3L 8721157 5` UTR CG32022 - chr3L 8721260 5` UTR CG32022 - chr3L 8721363 5` UTR CG6511 + chr3L_27_8720001 chr3L_8720001 RAL-853_125b 2005 chr3L 8791231 8791305 chr3L 8796701 8796774 I-element 16 5469 9.0 0.0 4.5 2.9 5543 chr3L 8791231 exon Fhos + chr3L 8794002 intron Fhos + chr3L 8796774 intron Fhos + chr3L_16_8790001 chr3L_8790001 RAL-853_125b 2006 chr3L 8808720 8808792 chr3L 8808975 8809009 20 252 40.0 34.5 37.2 0.5 289 chr3L 8808720 exon CG13308 + chr3L 8808864 exon CG13308 + chr3L 8809009 exon CG13308 + chr3L_20_8805001 chr3L_8805001 RAL-853_125b 2007 chr3L 8826747 8826800 chr3L 8826895 8826966 8 164 18.5 17.0 17.8 0.4 219 chr3L 8826747 intergenic not near genes chr3L 8826856 intergenic not near genes chr3L 8826966 intergenic not near genes chr3L_8_8825001 chr3L_8825001 RAL-853_125b 2008 chr3L 8832375 8832429 chr3L 8832519 8832569 14 143 26.0 33.0 29.5 0.5 194 chr3L 8832375 intron dally + chr3L 8832472 intron dally + chr3L 8832569 intron dally + chr3L_14_8830001 chr3L_8830001 RAL-853_125b 2009 chr3L 8839677 8839753 chr3L 8839807 8839892 14 132 7.0 3.5 5.2 2.3 215 chr3L 8839677 intron dally + chr3L 8839784 intron dally + chr3L 8839892 intron dally + chr3L_14_8835001 chr3L_8835001 RAL-853_125b 2010 chr3L 8849384 8849392 chr3L 8849521 8849529 4 137 21.0 24.0 22.5 0.2 145 chr3L 8849384 intron dally + chr3L 8849456 intron dally + chr3L 8849529 intron dally + chr3L_4_8845001 chr3L_8845001 RAL-853_125b 2011 chr3L 8859273 8859345 chr3L 8859411 8859483 16 130 26.0 26.5 26.2 0.6 210 chr3L 8859273 intron dally + chr3L 8859378 intron dally + chr3L 8859483 intron dally + chr3L_16_8855001 chr3L_8855001 RAL-853_125b 2012 chr3L 8861462 8861550 chr3L 8861612 8861691 8 148 14.5 16.0 15.2 0.5 229 chr3L 8861462 intron dally + chr3L 8861576 intron dally + chr3L 8861691 intron dally + chr3L_8_8860001 chr3L_8860001 RAL-853_125b 2013 chr3L 8880297 8880322 chr3L 8880612 8880656 8 336 18.0 19.5 18.8 0.4 359 chr3L 8880297 intron dally + chr3L 8880476 intron dally + chr3L 8880656 intron dally + chr3L_8_8880001 chr3L_8880001 RAL-853_125b 2014 chr3L 8925405 8925426 chr3L 8925547 8925567 5 142 15.0 7.0 11.0 0.4 162 chr3L 8925405 intron Tsp66E + chr3L 8925486 intron Tsp66E + chr3L 8925567 intron Tsp66E + chr3L_5_8925001 chr3L_8925001 RAL-853_125b 2015 chr3L 8949347 8949386 chr3L 8949494 8949561 9 156 28.5 24.0 26.2 0.3 214 chr3L 8949347 intron,intron CG43783 -,orb2 - chr3L 8949454 intron,intron CG43783 -,orb2 - chr3L 8949561 intron,intron CG43783 -,orb2 - chr3L_9_8945001 chr3L_8945001 RAL-853_125b 2016 chr3L 8950520 8950576 chr3L 8950646 8950719 18 141 6.5 6.0 6.2 2.5 199 chr3L 8950520 intron,intron CG43783 -,orb2 - chr3L 8950620 intron,intron CG43783 -,orb2 - chr3L 8950719 intron,intron CG43783 -,orb2 - chr3L_18_8950001 chr3L_8950001 RAL-853_125b 2017 chr3L 8959351 8959363 chr3L 8959562 8959574 4 211 33.5 23.0 28.2 0.1 223 chr3L 8959351 intron CG13313 + chr3L 8959462 intron CG13313 + chr3L 8959574 intron CG13313 + chr3L_4_8955001 chr3L_8955001 RAL-853_125b 2018 chr3L 9003908 9003967 chr3L 9004038 9004102 12 134 20.0 17.5 18.8 0.6 194 chr3L 9003908 intergenic not near genes chr3L 9004005 intergenic not near genes chr3L 9004102 intergenic not near genes chr3L_12_9000001 chr3L_9000001 RAL-853_125b 2019 chr3L 9013689 9013695 chr3L 18417066 18417066 4 9403375 61.5 35.5 48.5 0.1 9403377 chr3L 9013689 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_4_13715001 chr3L_13715001 RAL-853_125b 2020 chr3L 9024457 9024528 chr3L 9024587 9024658 10 130 16.0 16.0 16.0 0.6 201 chr3L 9024457 intergenic not near genes chr3L 9024558 intergenic not near genes chr3L 9024658 intergenic not near genes chr3L_10_9020001 chr3L_9020001 RAL-853_125b 2021 chr3L 9030406 9030452 chr3L 9030535 9030575 4 128 19.5 21.5 20.5 0.2 169 chr3L 9030406 intergenic not near genes chr3L 9030490 intergenic not near genes chr3L 9030575 intergenic not near genes chr3L_4_9030001 chr3L_9030001 RAL-853_125b 2022 chr3L 9036250 9036281 chr3L 9036386 9036417 15 134 25.0 22.0 23.5 0.6 167 chr3L 9036250 intergenic not near genes chr3L 9036334 intergenic not near genes chr3L 9036417 intergenic not near genes chr3L_15_9035001 chr3L_9035001 RAL-853_125b 2023 chr3L 9047046 9047112 chr3L 9047183 9047249 7 137 9.5 12.0 10.8 0.6 203 chr3L 9047046 intergenic CG5144 + chr3L 9047148 intergenic CG5144 + chr3L 9047249 intergenic CG5144 + chr3L_7_9045001 chr3L_9045001 RAL-853_125b 2024 chr3L 9067275 9067329 chr3L 9067404 9067458 13 129 26.5 29.0 27.8 0.5 183 chr3L 9067275 3` UTR CG4911 - chr3L 9067366 3` UTR CG4911 - chr3L 9067458 3` UTR CG4911 - chr3L_13_9065001 chr3L_9065001 RAL-853_125b 2025 chr3L 9076886 9076942 chr3L 9084495 9084552 412 25 7608 15.5 10.5 13.0 1.8 7666 chr3L 9076886 exon Tequila + chr3L 9080719 intron Tequila + chr3L 9084552 exon Tequila + chr3L_25_9080001 chr3L_9080001 RAL-853_125b 2026 chr3L 9086197 9086217 chr3L 9086330 9086350 6 133 36.0 31.5 33.8 0.2 153 chr3L 9086197 exon Tequila + chr3L 9086274 exon Tequila + chr3L 9086350 exon Tequila + chr3L_6_9085001 chr3L_9085001 RAL-853_125b 2027 chr3L 9118334 9118344 chr3L 9118464 9118474 4 130 31.5 30.5 31.0 0.1 140 chr3L 9118334 intron bol - chr3L 9118404 intron bol - chr3L 9118474 intron bol - chr3L_4_9115001 chr3L_9115001 RAL-853_125b 2028 chr3L 9130512 9130581 chr3L 9134323 9134391 412 28 3804 12.5 10.5 11.5 2.2 3879 chr3L 9130512 intergenic bol - chr3L 9132452 intergenic not near genes chr3L 9134391 intergenic Dhpr + chr3L_28_9130001 chr3L_9130001 RAL-853_125b 2029 chr3L 9143314 9143387 chr3L 9143454 9143558 8 167 1.0 0.0 0.5 5.3 244 chr3L 9143314 exon nwk + chr3L 9143436 intron nwk + chr3L 9143558 exon nwk + chr3L_8_9140001 chr3L_9140001 RAL-853_125b 2030 chr3L 9164656 9164672 chr3L 9166173 9166189 hobo 12 1516 14.0 0.0 7.0 1.5 1533 chr3L 9164656 intron Rdl - chr3L 9165422 intron Rdl - chr3L 9166189 intron Rdl - chr3L_12_9165001 chr3L_9165001 RAL-853_125b 2031 chr3L 9164673 9164701 chr3L 9166166 9166196 hobo 4 1506 10.5 0.0 5.2 0.6 1523 chr3L 9164673 intron Rdl - chr3L 9165434 intron Rdl - chr3L 9166196 intron Rdl - chr3L_4_9165001 chr3L_9165001 RAL-853_125b 2032 chr3L 9219206 9219269 chr3L 9219918 9219964 jockey 27 717 10.5 8.5 9.5 2.6 758 chr3L 9219206 intergenic not near genes chr3L 9219585 intergenic not near genes chr3L 9219964 intergenic not near genes chr3L_27_9215001 chr3L_9215001 RAL-853_125b 2033 chr3L 9221440 9221505 chr3L 9221568 9221628 18 125 13.0 13.0 13.0 1.3 188 chr3L 9221440 intergenic not near genes chr3L 9221534 intergenic CR45408 + chr3L 9221628 intergenic CR45408 + chr3L_18_9220001 chr3L_9220001 RAL-853_125b 2034 chr3L 9237503 9237540 chr3L 9237639 9237676 11 135 6.0 9.5 7.8 1.2 173 chr3L 9237503 intergenic not near genes chr3L 9237590 intergenic not near genes chr3L 9237676 intergenic not near genes chr3L_11_9235001 chr3L_9235001 RAL-853_125b 2035 chr3L 9241098 9241153 chr3L 9241228 9241283 20 130 7.5 13.5 10.5 1.7 185 chr3L 9241098 intergenic not near genes chr3L 9241190 intergenic not near genes chr3L 9241283 intergenic not near genes chr3L_20_9240001 chr3L_9240001 RAL-853_125b 2036 chr3L 9270570 9270651 chr3L 9278375 9278404 roo 22 7788 7.0 7.5 7.2 2.7 7834 chr3L 9270570 intron GluRIB + chr3L 9274487 intron GluRIB + chr3L 9278404 exon GluRIB + chr3L_22_9270001 chr3L_9270001 RAL-853_125b 2037 chr3L 9307796 9307796 chr3L 22908066 22908066 10 13600270 23.5 42.5 33.0 0.3 13600270 chr3L 9307796 intergenic not near genes chr3L 16107931 intron Zn72D - chr3L 22908066 intergenic not near genes chr3L_10_16105001 chr3L_16105001 RAL-853_125b 2038 chr3L 9313984 9314069 chr3L 9314125 9314209 5 141 2.5 4.0 3.2 1.2 225 chr3L 9313984 intergenic not near genes chr3L 9314096 intergenic not near genes chr3L 9314209 intergenic not near genes chr3L_5_9310001 chr3L_9310001 RAL-853_125b 2039 chr3L 9359542 9359614 chr3L 9359683 9359755 22 141 17.0 16.0 16.5 1.3 213 chr3L 9359542 3` UTR CG32039 + chr3L 9359648 3` UTR CG32039 + chr3L 9359755 3` UTR CG32039 + chr3L_22_9355001 chr3L_9355001 RAL-853_125b 2040 chr3L 9403600 9403661 chr3L 9403745 9403806 9 144 27.5 29.0 28.2 0.3 206 chr3L 9403600 intergenic not near genes chr3L 9403703 intergenic not near genes chr3L 9403806 intergenic not near genes chr3L_9_9400001 chr3L_9400001 RAL-853_125b 2041 chr3L 9443491 9443535 chr3L 9445332 9445376 S-element 14 1839 2.5 9.5 6.0 2.0 1885 chr3L 9443491 intron CG33926 + chr3L 9444434 intron CG33926 + chr3L 9445376 intron CG33926 + chr3L_14_9440001 chr3L_9440001 RAL-853_125b 2042 chr3L 9492359 9492377 chr3L 9492490 9492508 6 131 22.0 5.0 13.5 0.4 149 chr3L 9492359 intergenic CG32037 - chr3L 9492434 intergenic CG32037 - chr3L 9492508 intergenic CG32037 - chr3L_6_9490001 chr3L_9490001 RAL-853_125b 2043 chr3L 9501657 9501727 chr3L 9502193 9502257 roo 21 536 6.5 7.0 6.8 2.7 600 chr3L 9501657 intron path - chr3L 9501957 intron path - chr3L 9502257 intron path - chr3L_21_9500001 chr3L_9500001 RAL-853_125b 2044 chr3L 9502556 9502620 chr3L 9502691 9502755 9 135 21.0 19.0 20.0 0.4 199 chr3L 9502556 intron path - chr3L 9502656 intron path - chr3L 9502755 intron path - chr3L_9_9500001 chr3L_9500001 RAL-853_125b 2045 chr3L 9510862 9510953 chr3L 9511005 9511081 25 134 2.0 9.5 5.8 3.7 219 chr3L 9510862 intron RpS9 - chr3L 9510972 intron RpS9 - chr3L 9511081 exon RpS9 - chr3L_25_9510001 chr3L_9510001 RAL-853_125b 2046 chr3L 9533722 9533730 chr3L 9541317 9541340 412 4 7606 18.5 11.0 14.8 0.3 7618 chr3L 9533722 intergenic not near genes chr3L 9537531 intergenic not near genes chr3L 9541340 intergenic not near genes chr3L_4_9535001 chr3L_9535001 RAL-853_125b 2047 chr3L 9533731 9533776 chr3L 9541316 9541359 412 17 7597 10.5 10.5 10.5 1.5 7628 chr3L 9533731 intergenic not near genes chr3L 9537545 intergenic not near genes chr3L 9541359 intergenic not near genes chr3L_17_9535001 chr3L_9535001 RAL-853_125b 2048 chr3L 9572256 9572285 chr3L 9572385 9572414 4 129 0.0 5.5 2.8 1.1 158 chr3L 9572256 intron CG42673 + chr3L 9572335 intron CG42673 + chr3L 9572414 intron CG42673 + chr3L_4_9570001 chr3L_9570001 RAL-853_125b 2049 chr3L 9575869 9575936 chr3L 9580997 9581065 jockey 19 5126 8.0 7.0 7.5 2.2 5196 chr3L 9575869 intron CG42673 + chr3L 9578467 intron CG42673 + chr3L 9581065 intron CG42673 + chr3L_19_9575001 chr3L_9575001 RAL-853_125b 2050 chr3L 9604202 9604246 chr3L 9604346 9604390 4 144 2.0 11.0 6.5 0.5 188 chr3L 9604202 intron CG3280 + chr3L 9604296 intron CG3280 + chr3L 9604390 intron CG3280 + chr3L_4_9600001 chr3L_9600001 RAL-853_125b 2051 chr3L 9637805 9637870 chr3L 9637937 9638002 5 132 32.0 38.0 35.0 0.1 197 chr3L 9637805 exon fry - chr3L 9637904 intron fry - chr3L 9638002 intron fry - chr3L_5_9635001 chr3L_9635001 RAL-853_125b 2052 chr3L 9638977 9639048 chr3L 9639116 9639183 4 137 12.5 22.5 17.5 0.2 206 chr3L 9638977 intron,3` UTR fry -,CG8329 + chr3L 9639080 intron fry - chr3L 9639183 intron fry - chr3L_4_9635001 chr3L_9635001 RAL-853_125b 2053 chr3L 9665800 9665859 chr3L 9666065 9666125 14 265 12.5 12.0 12.2 1.1 325 chr3L 9665800 intron fry - chr3L 9665962 intron fry - chr3L 9666125 intron fry - chr3L_14_9665001 chr3L_9665001 RAL-853_125b 2054 chr3L 9736464 9736501 chr3L 9736590 9736630 4 127 6.5 5.5 6.0 0.6 166 chr3L 9736464 intron CG42268 - chr3L 9736547 intron CG42268 - chr3L 9736630 intron CG42268 - chr3L_4_9735001 chr3L_9735001 RAL-853_125b 2055 chr3L 9741575 9741628 chr3L 9741717 9741770 18 141 12.0 13.5 12.8 1.3 195 chr3L 9741575 intron,intron CG42268 -,CR44348 + chr3L 9741672 intron,intron CG42268 -,CR44348 + chr3L 9741770 intron,intron CG42268 -,CR44348 + chr3L_18_9740001 chr3L_9740001 RAL-853_125b 2056 chr3L 9750607 9750635 chr3L 9750734 9750762 10 127 12.0 3.5 7.8 1.1 155 chr3L 9750607 intron CG42268 - chr3L 9750684 intron CG42268 - chr3L 9750762 intron CG42268 - chr3L_10_9750001 chr3L_9750001 RAL-853_125b 2057 chr3L 9775345 9775355 chr3L 9775744 9775764 4 406 8.0 30.5 19.2 0.2 419 chr3L 9775345 intron CG8177 + chr3L 9775554 intron CG8177 + chr3L 9775764 intron CG8177 + chr3L_4_9775001 chr3L_9775001 RAL-853_125b 2058 chr3L 9846306 9846382 chr3L 9846780 9846854 5 472 36.5 27.5 32.0 0.2 548 chr3L 9846306 intron RasGAP1 - chr3L 9846580 intron RasGAP1 - chr3L 9846854 intron RasGAP1 - chr3L_5_9845001 chr3L_9845001 RAL-853_125b 2059 chr3L 9895311 9895380 chr3L 9895441 9895510 29 126 15.0 10.5 12.8 2.1 199 chr3L 9895311 3` UTR CG6707 - chr3L 9895410 3` UTR CG6707 - chr3L 9895510 3` UTR CG6707 - chr3L_29_9895001 chr3L_9895001 RAL-853_125b 2060 chr3L 9918836 9918907 chr3L 9918981 9919052 31 145 13.0 5.0 9.0 3.1 216 chr3L 9918836 intron CG34356 + chr3L 9918944 intron CG34356 + chr3L 9919052 intron CG34356 + chr3L_31_9915001 chr3L_9915001 RAL-853_125b 2061 chr3L 9929628 9929688 chr3L 9938459 9938519 roo 18 8831 8.0 3.0 5.5 2.8 8891 chr3L 9929628 intron CG34356 + chr3L 9934074 intron CG34356 + chr3L 9938519 intron CG34356 + chr3L_18_9930001 chr3L_9930001 RAL-853_125b 2062 chr3L 9940110 9940132 chr3L 9940230 9940260 16 124 25.0 16.0 20.5 0.7 150 chr3L 9940110 intron CG34356 + chr3L 9940185 intron CG34356 + chr3L 9940260 intron CG34356 + chr3L_16_9940001 chr3L_9940001 RAL-853_125b 2063 chr3L 9940134 9940164 chr3L 9940227 9940239 11 112 20.0 15.5 17.8 0.6 105 chr3L 9940134 intron CG34356 + chr3L 9940186 intron CG34356 + chr3L 9940239 intron CG34356 + chr3L_11_9940001 chr3L_9940001 RAL-853_125b 2064 chr3L 9951195 9951225 chr3L 9951332 9951362 4 137 23.5 31.5 27.5 0.1 167 chr3L 9951195 intron CG34356 + chr3L 9951278 intron CG34356 + chr3L 9951362 intron CG34356 + chr3L_4_9950001 chr3L_9950001 RAL-853_125b 2065 chr3L 9997127 9997167 chr3L 9997368 9997408 4 241 32.0 28.0 30.0 0.1 281 chr3L 9997127 intron dpr6 + chr3L 9997268 intron dpr6 + chr3L 9997408 intron dpr6 + chr3L_4_9995001 chr3L_9995001 RAL-853_125b 2066 chr3L 10004070 10004104 chr3L 10004176 10004234 9 124 9.0 6.0 7.5 1.1 164 chr3L 10004070 exon dpr6 + chr3L 10004152 intron dpr6 + chr3L 10004234 intron dpr6 + chr3L_9_10000001 chr3L_10000001 RAL-853_125b 2067 chr3L 10019597 10019670 chr3L 10019906 10019975 14 307 6.5 6.0 6.2 1.9 378 chr3L 10019597 intron dpr6 + chr3L 10019786 intron dpr6 + chr3L 10019975 intron dpr6 + chr3L_14_10015001 chr3L_10015001 RAL-853_125b 2068 chr3L 10032496 10032567 chr3L 10032632 10032704 4 136 0.0 9.0 4.5 0.7 208 chr3L 10032496 intron dpr6 + chr3L 10032600 intron dpr6 + chr3L 10032704 intron dpr6 + chr3L_4_10030001 chr3L_10030001 RAL-853_125b 2069 chr3L 10040961 10041010 chr3L 10041088 10041137 6 127 11.0 10.5 10.8 0.5 176 chr3L 10040961 exon dpr6 + chr3L 10041049 intron dpr6 + chr3L 10041137 intron dpr6 + chr3L_6_10040001 chr3L_10040001 RAL-853_125b 2070 chr3L 10060079 10060116 chr3L 10067708 10067745 17.6 17 7629 16.0 13.5 14.8 1.1 7666 chr3L 10060079 intron dpr6 + chr3L 10063912 intron dpr6 + chr3L 10067745 intron dpr6 + chr3L_17_10060001 chr3L_10060001 RAL-853_125b 2071 chr3L 10082518 10082580 chr3L 10082650 10082710 12 132 5.0 4.0 4.5 2.2 192 chr3L 10082518 intron dpr6 + chr3L 10082614 intron dpr6 + chr3L 10082710 intron dpr6 + chr3L_12_10080001 chr3L_10080001 RAL-853_125b 2072 chr3L 10161425 10161458 chr3L 10161554 10161570 9 127 7.5 19.5 13.5 0.6 145 chr3L 10161425 intron dpr10 - chr3L 10161498 intron dpr10 - chr3L 10161570 intron dpr10 - chr3L_9_10160001 chr3L_10160001 RAL-853_125b 2073 chr3L 10191251 10191297 chr3L 10191404 10191458 6 160 30.5 27.5 29.0 0.2 207 chr3L 10191251 exon ect - chr3L 10191354 intron ect - chr3L 10191458 intron ect - chr3L_6_10190001 chr3L_10190001 RAL-853_125b 2074 chr3L 10214731 10214763 chr3L 10214917 10214949 8 186 5.0 8.5 6.8 1.0 218 chr3L 10214731 intergenic not near genes chr3L 10214840 intergenic not near genes chr3L 10214949 intergenic not near genes chr3L_8_10210001 chr3L_10210001 RAL-853_125b 2075 chr3L 10219208 10219258 chr3L 10219355 10219405 4 147 22.5 21.0 21.8 0.2 197 chr3L 10219208 exon CG32055 - chr3L 10219306 exon CG32055 - chr3L 10219405 exon CG32055 - chr3L_4_10215001 chr3L_10215001 RAL-853_125b 2076 chr3L 10246049 10246070 chr3L 10246202 10246223 5 153 0.0 12.0 6.0 0.7 174 chr3L 10246049 intergenic not near genes chr3L 10246136 intergenic not near genes chr3L 10246223 intergenic not near genes chr3L_5_10245001 chr3L_10245001 RAL-853_125b 2077 chr3L 10255330 10255407 chr3L 10255473 10255555 13 146 3.0 8.0 5.5 2.0 225 chr3L 10255330 intergenic not near genes chr3L 10255442 intergenic not near genes chr3L 10255555 intergenic not near genes chr3L_13_10255001 chr3L_10255001 RAL-853_125b 2078 chr3L 10298622 10298694 chr3L 10298754 10298831 14 136 0.0 4.5 2.2 4.4 209 chr3L 10298622 intergenic not near genes chr3L 10298726 intergenic not near genes chr3L 10298831 intergenic not near genes chr3L_14_10295001 chr3L_10295001 RAL-853_125b 2079 chr3L 10300002 10300068 chr3L 10300144 10300210 20 142 2.0 4.5 3.2 4.8 208 chr3L 10300002 intergenic not near genes chr3L 10300106 intergenic not near genes chr3L 10300210 intergenic not near genes chr3L_20_10300001 chr3L_10300001 RAL-853_125b 2080 chr3L 10308717 10308758 chr3L 10308827 10308885 15 125 1.0 8.5 4.8 2.6 168 chr3L 10308717 intergenic not near genes chr3L 10308801 intergenic not near genes chr3L 10308885 intergenic not near genes chr3L_15_10305001 chr3L_10305001 RAL-853_125b 2081 chr3L 10310306 10310374 chr3L 10310453 10310521 13 147 18.5 18.0 18.2 0.7 215 chr3L 10310306 intergenic not near genes chr3L 10310414 intergenic not near genes chr3L 10310521 intergenic not near genes chr3L_13_10310001 chr3L_10310001 RAL-853_125b 2082 chr3L 10314088 10314146 chr3L 10314224 10314282 20 136 9.0 14.0 11.5 1.6 194 chr3L 10314088 intergenic not near genes chr3L 10314185 intergenic not near genes chr3L 10314282 intergenic not near genes chr3L_20_10310001 chr3L_10310001 RAL-853_125b 2083 chr3L 10314431 10314503 chr3L 10314561 10314633 24 130 9.0 5.0 7.0 3.0 202 chr3L 10314431 intergenic not near genes chr3L 10314532 intergenic not near genes chr3L 10314633 intergenic not near genes chr3L_24_10310001 chr3L_10310001 RAL-853_125b 2084 chr3L 10328066 10328102 chr3L 10328228 10328264 5 162 5.0 3.0 4.0 1.0 198 chr3L 10328066 intergenic not near genes chr3L 10328165 intergenic not near genes chr3L 10328264 intergenic not near genes chr3L_5_10325001 chr3L_10325001 RAL-853_125b 2085 chr3L 10348604 10348645 chr3L 10348771 10348812 19 166 13.5 0.5 7.0 2.4 208 chr3L 10348604 intron CR44327 + chr3L 10348708 intron CR44327 + chr3L 10348812 intron CR44327 + chr3L_19_10345001 chr3L_10345001 RAL-853_125b 2086 chr3L 10367465 10367521 chr3L 10367592 10367648 7 127 2.5 0.0 1.2 3.2 183 chr3L 10367465 intergenic CR44327 + chr3L 10367556 intergenic CR44327 + chr3L 10367648 intergenic CR44327 + chr3L_7_10365001 chr3L_10365001 RAL-853_125b 2087 chr3L 10381292 10381324 chr3L 10381421 10381453 5 129 25.0 17.0 21.0 0.2 161 chr3L 10381292 intergenic not near genes chr3L 10381372 intergenic not near genes chr3L 10381453 intergenic not near genes chr3L_5_10380001 chr3L_10380001 RAL-853_125b 2088 chr3L 10414895 10414964 chr3L 10417315 10417386 Doc 20 2422 9.0 7.0 8.0 2.2 2491 chr3L 10414895 intergenic CG12362 + chr3L 10416140 intergenic not near genes chr3L 10417386 intergenic not near genes chr3L_20_10415001 chr3L_10415001 RAL-853_125b 2089 chr3L 10417542 10417593 chr3L 10417669 10417675 5 114 20.0 21.0 20.5 0.2 133 chr3L 10417542 intergenic not near genes chr3L 10417608 intergenic not near genes chr3L 10417675 intergenic not near genes chr3L_5_10415001 chr3L_10415001 RAL-853_125b 2090 chr3L 10450635 10450708 chr3L 10450782 10450838 7 132 6.0 16.0 11.0 0.6 203 chr3L 10450635 intergenic not near genes chr3L 10450736 intergenic not near genes chr3L 10450838 intergenic not near genes chr3L_7_10450001 chr3L_10450001 RAL-853_125b 2091 chr3L 10470220 10470270 chr3L 10470336 10470402 8 133 23.0 27.5 25.2 0.3 182 chr3L 10470220 intergenic not near genes chr3L 10470311 intergenic not near genes chr3L 10470402 intergenic not near genes chr3L_8_10470001 chr3L_10470001 RAL-853_125b 2092 chr3L 10476543 10476595 chr3L 10476680 10476732 9 134 20.5 20.5 20.5 0.4 189 chr3L 10476543 intergenic not near genes chr3L 10476638 intergenic not near genes chr3L 10476732 intergenic not near genes chr3L_9_10475001 chr3L_10475001 RAL-853_125b 2093 chr3L 10502003 10502032 chr3L 10502149 10502178 4 146 17.5 16.5 17.0 0.2 175 chr3L 10502003 intron A2bp1 + chr3L 10502090 intron A2bp1 + chr3L 10502178 intron A2bp1 + chr3L_4_10500001 chr3L_10500001 RAL-853_125b 2094 chr3L 10504302 10504343 chr3L 10504426 10504472 5 127 21.0 23.5 22.2 0.2 170 chr3L 10504302 intron A2bp1 + chr3L 10504387 intron A2bp1 + chr3L 10504472 intron A2bp1 + chr3L_5_10500001 chr3L_10500001 RAL-853_125b 2095 chr3L 10509454 10509467 chr3L 10509633 10509641 4 176 8.0 2.0 5.0 0.7 187 chr3L 10509454 intron A2bp1 + chr3L 10509548 intron A2bp1 + chr3L 10509641 intron A2bp1 + chr3L_4_10505001 chr3L_10505001 RAL-853_125b 2096 chr3L 10520556 10520564 chr3L 10520621 10520692 5 115 11.0 23.0 17.0 0.3 136 chr3L 10520556 intron A2bp1 + chr3L 10520624 intron A2bp1 + chr3L 10520692 intron A2bp1 + chr3L_5_10520001 chr3L_10520001 RAL-853_125b 2097 chr3L 10584230 10584300 chr3L 10584367 10584437 13 137 18.0 16.5 17.2 0.7 207 chr3L 10584230 intron A2bp1 + chr3L 10584334 intron A2bp1 + chr3L 10584437 intron A2bp1 + chr3L_13_10580001 chr3L_10580001 RAL-853_125b 2098 chr3L 10598786 10598789 chr3L 10598913 10598916 4 127 12.0 0.0 6.0 0.6 130 chr3L 10598786 intergenic not near genes chr3L 10598851 intergenic not near genes chr3L 10598916 intergenic not near genes chr3L_4_10595001 chr3L_10595001 RAL-853_125b 2099 chr3L 10598790 10598806 chr3L 10598905 10598916 4 120 11.5 0.0 5.8 0.6 126 chr3L 10598790 intergenic not near genes chr3L 10598853 intergenic not near genes chr3L 10598916 intergenic not near genes chr3L_4_10595001 chr3L_10595001 RAL-853_125b 2100 chr3L 10600405 10600476 chr3L 10600537 10600608 15 132 7.0 4.5 5.8 2.2 203 chr3L 10600405 intergenic not near genes chr3L 10600506 intergenic not near genes chr3L 10600608 intergenic not near genes chr3L_15_10600001 chr3L_10600001 RAL-853_125b 2101 chr3L 10611265 10611332 chr3L 10611391 10611458 4 124 16.5 18.5 17.5 0.2 193 chr3L 10611265 intergenic not near genes chr3L 10611362 intergenic not near genes chr3L 10611458 intergenic not near genes chr3L_4_10610001 chr3L_10610001 RAL-853_125b 2102 chr3L 10621820 10621872 chr3L 10621957 10622009 15 137 2.0 7.5 4.8 2.6 189 chr3L 10621820 intergenic not near genes chr3L 10621914 intergenic not near genes chr3L 10622009 intergenic not near genes chr3L_15_10620001 chr3L_10620001 RAL-853_125b 2103 chr3L 10628324 10628385 chr3L 10628531 10628594 13 205 19.0 17.5 18.2 0.7 270 chr3L 10628324 intron CG14151 - chr3L 10628459 5` UTR CG14151 - chr3L 10628594 intergenic CG14151 -,CG42536 - chr3L_13_10625001 chr3L_10625001 RAL-853_125b 2104 chr3L 10653301 10653347 chr3L 10653436 10653482 9 133 22.0 21.5 21.8 0.4 181 chr3L 10653301 intron CG32066 - chr3L 10653392 intron CG32066 - chr3L 10653482 intron CG32066 - chr3L_9_10650001 chr3L_10650001 RAL-853_125b 2105 chr3L 10654087 10654156 chr3L 10654224 10654297 8 128 7.0 12.0 9.5 0.8 210 chr3L 10654087 intron CG32066 - chr3L 10654192 intron CG32066 - chr3L 10654297 intron CG32066 - chr3L_8_10650001 chr3L_10650001 RAL-853_125b 2106 chr3L 10658057 10658207 chr3L 10658184 10658382 31 160 0.0 0.0 0.0 31.0 325 chr3L 10658057 intron CG32066 - chr3L 10658220 intron CG32066 - chr3L 10658382 intron CG32066 - chr3L_31_10655001 chr3L_10655001 RAL-853_125b 2107 chr3L 10678624 10678708 chr3L 10678763 10678837 5 131 2.0 6.0 4.0 1.0 213 chr3L 10678624 intron simj + chr3L 10678730 intron simj + chr3L 10678837 intron simj + chr3L_5_10675001 chr3L_10675001 RAL-853_125b 2108 chr3L 10700159 10700191 chr3L 10700290 10700322 7 131 6.0 9.5 7.8 0.8 163 chr3L 10700159 intergenic not near genes chr3L 10700240 intergenic not near genes chr3L 10700322 intergenic not near genes chr3L_7_10700001 chr3L_10700001 RAL-853_125b 2109 chr3L 10735785 10735815 chr3L 10735924 10735954 6 139 8.0 7.0 7.5 0.7 169 chr3L 10735785 intergenic not near genes chr3L 10735870 intergenic not near genes chr3L 10735954 intergenic not near genes chr3L_6_10735001 chr3L_10735001 RAL-853_125b 2110 chr3L 10762798 10762807 chr3L 10762919 10762941 7 127 22.0 15.5 18.8 0.4 143 chr3L 10762798 intergenic not near genes chr3L 10762870 intergenic not near genes chr3L 10762941 intergenic not near genes chr3L_7_10760001 chr3L_10760001 RAL-853_125b 2111 chr3L 10762820 10762851 chr3L 10762917 10762975 10 119 17.5 15.0 16.2 0.6 155 chr3L 10762820 intergenic not near genes chr3L 10762898 intergenic not near genes chr3L 10762975 intergenic not near genes chr3L_10_10760001 chr3L_10760001 RAL-853_125b 2112 chr3L 10820496 10820507 chr3L 10820705 10820716 4 209 6.5 12.0 9.2 0.4 220 chr3L 10820496 intergenic not near genes chr3L 10820606 intergenic not near genes chr3L 10820716 intergenic not near genes chr3L_4_10820001 chr3L_10820001 RAL-853_125b 2113 chr3L 10889201 10889211 chr3L 10889330 10889341 5 130 22.0 16.0 19.0 0.2 140 chr3L 10889201 intergenic not near genes chr3L 10889271 intergenic not near genes chr3L 10889341 intergenic not near genes chr3L_5_10885001 chr3L_10885001 RAL-853_125b 2114 chr3L 10889221 10889260 chr3L 10889306 10889339 8 112 20.5 16.5 18.5 0.4 118 chr3L 10889221 intergenic not near genes chr3L 10889280 intergenic not near genes chr3L 10889339 intergenic not near genes chr3L_8_10885001 chr3L_10885001 RAL-853_125b 2115 chr3L 10914268 10914287 chr3L 10914399 10914418 5 131 9.0 0.5 4.8 0.9 150 chr3L 10914268 intergenic not near genes chr3L 10914343 intergenic not near genes chr3L 10914418 intergenic not near genes chr3L_5_10910001 chr3L_10910001 RAL-853_125b 2116 chr3L 10956413 10956462 chr3L 10956581 10956630 18 166 5.0 10.5 7.8 2.0 217 chr3L 10956413 intergenic not near genes chr3L 10956522 intergenic not near genes chr3L 10956630 intergenic not near genes chr3L_18_10955001 chr3L_10955001 RAL-853_125b 2117 chr3L 10956957 10957028 chr3L 10957083 10957152 10 124 36.5 30.0 33.2 0.3 195 chr3L 10956957 intergenic not near genes chr3L 10957054 intergenic not near genes chr3L 10957152 intergenic not near genes chr3L_10_10955001 chr3L_10955001 RAL-853_125b 2118 chr3L 10958167 10958184 chr3L 10958299 10958316 5 132 18.0 10.5 14.2 0.3 149 chr3L 10958167 intergenic not near genes chr3L 10958242 intergenic not near genes chr3L 10958316 intergenic not near genes chr3L_5_10955001 chr3L_10955001 RAL-853_125b 2119 chr3L 10997557 10997581 chr3L 10997707 10997731 13 149 9.0 10.0 9.5 1.2 174 chr3L 10997557 intron klu - chr3L 10997644 intron klu - chr3L 10997731 intron klu - chr3L_13_10995001 chr3L_10995001 RAL-853_125b 2120 chr3L 11053614 11053683 chr3L 11053749 11053812 17 135 0.0 8.0 4.0 3.4 198 chr3L 11053614 intergenic CG7888 + chr3L 11053713 intergenic CG7888 + chr3L 11053812 intergenic CG7888 + chr3L_17_11050001 chr3L_11050001 RAL-853_125b 2121 chr3L 11087011 11087082 chr3L 11088849 11088921 S-element 15 1838 4.5 7.0 5.8 2.2 1910 chr3L 11087011 intron JIL-1 - chr3L 11087966 intron JIL-1 - chr3L 11088921 intron JIL-1 - chr3L_15_11085001 chr3L_11085001 RAL-853_125b 2122 chr3L 11104027 11104106 chr3L 11104156 11104237 8 131 3.0 1.0 2.0 2.7 210 chr3L 11104027 intergenic CG32071 - chr3L 11104132 intergenic CG32071 - chr3L 11104237 intergenic CG32071 - chr3L_8_11100001 chr3L_11100001 RAL-853_125b 2123 chr3L 11105248 11105327 chr3L 11107009 11107052 X-element 32 1756 3.5 8.0 5.8 4.7 1804 chr3L 11105248 intergenic not near genes chr3L 11106150 intergenic not near genes chr3L 11107052 exon CG32073 - chr3L_32_11105001 chr3L_11105001 RAL-853_125b 2124 chr3L 11135478 11135523 chr3L 11135758 11135803 10 280 6.0 0.0 3.0 2.5 325 chr3L 11135478 3` UTR CG14143 + chr3L 11135640 intergenic CG14143 +,CG32082 + chr3L 11135803 intergenic CG32082 +,CG14143 + chr3L_10_11135001 chr3L_11135001 RAL-853_125b 2125 chr3L 11145541 11145556 chr3L 11145641 11145696 6 133 0.0 7.0 3.5 1.3 155 chr3L 11145541 intron CG32082 + chr3L 11145618 intron CG32082 + chr3L 11145696 intron CG32082 + chr3L_6_11145001 chr3L_11145001 RAL-853_125b 2126 chr3L 11229962 11230022 chr3L 11230109 11230169 26 147 6.0 12.0 9.0 2.6 207 chr3L 11229962 intergenic CG42671 + chr3L 11230066 intergenic CG42671 + chr3L 11230169 intergenic not near genes chr3L_26_11230001 chr3L_11230001 RAL-853_125b 2127 chr3L 11241736 11241793 chr3L 11241868 11241925 22 132 4.5 3.5 4.0 4.4 189 chr3L 11241736 intergenic not near genes chr3L 11241830 intergenic not near genes chr3L 11241925 intergenic not near genes chr3L_22_11240001 chr3L_11240001 RAL-853_125b 2128 chr3L 11256350 11256409 chr3L 11256494 11256553 13 143 4.0 0.0 2.0 4.3 203 chr3L 11256350 intergenic scyl + chr3L 11256452 intergenic scyl + chr3L 11256553 intergenic scyl + chr3L_13_11255001 chr3L_11255001 RAL-853_125b 2129 chr3L 11264422 11264486 chr3L 11271423 11271488 17.6 9 7002 5.5 5.0 5.2 1.5 7066 chr3L 11264422 intergenic not near genes chr3L 11267955 intergenic not near genes chr3L 11271488 intergenic not near genes chr3L_9_11265001 chr3L_11265001 RAL-853_125b 2130 chr3L 11277404 11277473 chr3L 11278455 11278518 Rt1a 13 1045 2.5 9.0 5.8 1.9 1114 chr3L 11277404 intergenic not near genes chr3L 11277961 intergenic not near genes chr3L 11278518 intergenic not near genes chr3L_13_11275001 chr3L_11275001 RAL-853_125b 2131 chr3L 11302997 11303047 chr3L 11303133 11303183 6 136 6.0 0.0 3.0 1.5 186 chr3L 11302997 intergenic not near genes chr3L 11303090 intergenic not near genes chr3L 11303183 intergenic not near genes chr3L_6_11300001 chr3L_11300001 RAL-853_125b 2132 chr3L 11304791 11304804 chr3L 11304938 11304951 5 147 16.0 0.0 8.0 0.6 160 chr3L 11304791 intergenic not near genes chr3L 11304871 intergenic not near genes chr3L 11304951 intergenic not near genes chr3L_5_11300001 chr3L_11300001 RAL-853_125b 2133 chr3L 11329654 11329721 chr3L 11332909 11332964 jockey 18 3249 7.5 9.5 8.5 1.9 3310 chr3L 11329654 intergenic not near genes chr3L 11331309 intergenic not near genes chr3L 11332964 intergenic not near genes chr3L_18_11330001 chr3L_11330001 RAL-853_125b 2134 chr3L 11339599 11339660 chr3L 11339726 11339787 24 126 13.0 10.5 11.8 1.9 188 chr3L 11339599 intergenic not near genes chr3L 11339693 intergenic not near genes chr3L 11339787 intergenic not near genes chr3L_24_11335001 chr3L_11335001 RAL-853_125b 2135 chr3L 11383919 11383955 chr3L 11384048 11384058 10 126 13.0 2.0 7.5 1.2 139 chr3L 11383919 intron CR42755 - chr3L 11383988 3` UTR CR42755 - chr3L 11384058 3` UTR CR42755 - chr3L_10_11380001 chr3L_11380001 RAL-853_125b 2136 chr3L 11441351 11441372 chr3L 11441480 11441501 11 129 0.0 8.0 4.0 2.2 150 chr3L 11441351 intergenic not near genes chr3L 11441426 intergenic not near genes chr3L 11441501 intergenic not near genes chr3L_11_11440001 chr3L_11440001 RAL-853_125b 2137 chr3L 11456862 11456906 chr3L 11457010 11457051 18 146 12.5 0.0 6.2 2.5 189 chr3L 11456862 intergenic CG12289 - chr3L 11456956 intergenic CG12289 - chr3L 11457051 intergenic CG12289 - chr3L_18_11455001 chr3L_11455001 RAL-853_125b 2138 chr3L 11474585 11474649 chr3L 11474724 11474788 13 139 7.5 0.0 3.8 2.7 203 chr3L 11474585 intergenic Vha16-2 + chr3L 11474686 intergenic Vha16-2 + chr3L 11474788 intergenic Vha16-2 + chr3L_13_11470001 chr3L_11470001 RAL-853_125b 2139 chr3L 11493106 11493187 chr3L 11493238 11493319 20 132 5.0 1.5 3.2 4.8 213 chr3L 11493106 intron chrb + chr3L 11493212 intron chrb + chr3L 11493319 intron chrb + chr3L_20_11490001 chr3L_11490001 RAL-853_125b 2140 chr3L 11553679 11553730 chr3L 11553831 11553882 27 150 13.5 10.5 12.0 2.1 203 chr3L 11553679 intron Mob2 - chr3L 11553780 intron Mob2 - chr3L 11553882 intron Mob2 - chr3L_27_11550001 chr3L_11550001 RAL-853_125b 2141 chr3L 11572953 11572997 chr3L 11573916 11573960 5 961 7.5 6.5 7.0 0.6 1007 chr3L 11572953 exon CG33490 - chr3L 11573456 exon CG33490 - chr3L 11573960 exon CG33490 - chr3L_5_11570001 chr3L_11570001 RAL-853_125b 2142 chr3L 11579505 11579583 chr3L 11579661 11579739 32 156 4.5 6.0 5.2 5.2 234 chr3L 11579505 intergenic CG43390 - chr3L 11579622 intergenic CG43390 - chr3L 11579739 intergenic CG43390 - chr3L_32_11575001 chr3L_11575001 RAL-853_125b 2143 chr3L 11673924 11673955 chr3L 11674050 11674056 6 122 12.5 0.0 6.2 0.8 132 chr3L 11673924 intron CG32085 - chr3L 11673990 intron CG32085 - chr3L 11674056 intron CG32085 - chr3L_6_11670001 chr3L_11670001 RAL-853_125b 2144 chr3L 11678054 11678118 chr3L 11678191 11678255 19 137 4.0 10.0 7.0 2.4 201 chr3L 11678054 intron CG32085 - chr3L 11678154 intron CG32085 - chr3L 11678255 intron CG32085 - chr3L_19_11675001 chr3L_11675001 RAL-853_125b 2145 chr3L 11723041 11723107 chr3L 11727886 11727952 Doc 26 4844 9.5 8.0 8.8 2.7 4911 chr3L 11723041 3` UTR Bmcp + chr3L 11725496 intron Bmcp + chr3L 11727952 3` UTR Bmcp + chr3L_26_11725001 chr3L_11725001 RAL-853_125b 2146 chr3L 11729626 11729703 chr3L 11729752 11729829 27 126 11.0 9.0 10.0 2.5 203 chr3L 11729626 exon CG32088 + chr3L 11729728 intron CG32088 + chr3L 11729829 exon CG32088 + chr3L_27_11725001 chr3L_11725001 RAL-853_125b 2147 chr3L 11743977 11744043 chr3L 11744135 11744201 18 158 12.0 1.5 6.8 2.3 224 chr3L 11743977 exon CG6024 - chr3L 11744089 intron CG6024 - chr3L 11744201 intron CG6024 - chr3L_18_11740001 chr3L_11740001 RAL-853_125b 2148 chr3L 11746619 11746678 chr3L 11746748 11746807 16 128 0.0 7.0 3.5 3.6 188 chr3L 11746619 intron CG6024 - chr3L 11746713 intron CG6024 - chr3L 11746807 intron CG6024 - chr3L_16_11745001 chr3L_11745001 RAL-853_125b 2149 chr3L 9313026 9313027 chr3L 11777678 11777678 6 2464652 30.5 32.0 31.2 0.2 2464652 chr3L 9313026 intergenic not near genes chr3L 10545352 intron A2bp1 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_6_10545001 chr3L_10545001 RAL-853_125b 2150 chr3L 11846341 11846372 chr3L 11846511 11846532 10 168 13.0 0.0 6.5 1.3 191 chr3L 11846341 intergenic not near genes chr3L 11846436 intergenic not near genes chr3L 11846532 intergenic not near genes chr3L_10_11845001 chr3L_11845001 RAL-853_125b 2151 chr3L 11847129 11847158 chr3L 11847269 11847298 9 140 10.5 0.0 5.2 1.5 169 chr3L 11847129 intergenic CG12521 - chr3L 11847214 intergenic CG12521 - chr3L 11847298 intergenic CG12521 - chr3L_9_11845001 chr3L_11845001 RAL-853_125b 2152 chr3L 11864528 11864540 chr3L 11865870 11865884 pogo 7 1344 17.5 15.5 16.5 0.4 1356 chr3L 11864528 intron CG44837 - chr3L 11865206 intron CG44837 - chr3L 11865884 intron CG44837 - chr3L_7_11865001 chr3L_11865001 RAL-853_125b 2153 chr3L 11864543 11864579 chr3L 11865858 11865924 pogo 17 1340 11.0 13.0 12.0 1.3 1381 chr3L 11864543 intron CG44837 - chr3L 11865234 intron CG44837 - chr3L 11865924 intron CG44837 - chr3L_17_11865001 chr3L_11865001 RAL-853_125b 2154 chr3L 11872208 11872216 chr3L 11872349 11872350 4 142 13.5 7.5 10.5 0.3 142 chr3L 11872208 intron CG44837 - chr3L 11872279 intron CG44837 - chr3L 11872350 intron CG44837 - chr3L_4_11870001 chr3L_11870001 RAL-853_125b 2155 chr3L 11872228 11872270 chr3L 11872347 11872392 23 141 6.5 7.0 6.8 2.9 164 chr3L 11872228 intron CG44837 - chr3L 11872310 intron CG44837 - chr3L 11872392 intron CG44837 - chr3L_23_11870001 chr3L_11870001 RAL-853_125b 2156 chr3L 11887208 11887269 chr3L 11887355 11887416 27 147 4.5 0.0 2.2 8.4 208 chr3L 11887208 intron CG44837 - chr3L 11887312 intron,3` UTR CG44837 -,CG5897 - chr3L 11887416 intron,3` UTR CG44837 -,CG5897 - chr3L_27_11885001 chr3L_11885001 RAL-853_125b 2157 chr3L 11943445 11943519 chr3L 11943596 11943670 31 151 6.0 7.0 6.5 4.1 225 chr3L 11943445 3` UTR Rpt4R + chr3L 11943558 intergenic Rpt4R +,CG5883 - chr3L 11943670 3` UTR CG5883 - chr3L_31_11940001 chr3L_11940001 RAL-853_125b 2158 chr3L 11974305 11974359 chr3L 11974435 11974489 24 130 6.0 0.0 3.0 6.0 184 chr3L 11974305 intergenic not near genes chr3L 11974397 intergenic not near genes chr3L 11974489 intergenic CG14125 + chr3L_24_11970001 chr3L_11970001 RAL-853_125b 2159 chr3L 11984527 11984601 chr3L 11984668 11984709 19 142 6.5 6.5 6.5 2.5 182 chr3L 11984527 intergenic CG6938 + chr3L 11984618 intergenic CG6938 + chr3L 11984709 intergenic CG6938 + chr3L_19_11980001 chr3L_11980001 RAL-853_125b 2160 chr3L 12013867 12013874 chr3L 12014008 12014015 4 141 17.5 7.5 12.5 0.3 148 chr3L 12013867 intron rols - chr3L 12013941 intron rols - chr3L 12014015 intron rols - chr3L_4_12010001 chr3L_12010001 RAL-853_125b 2161 chr3L 12013876 12013937 chr3L 12014007 12014057 25 139 4.5 7.0 5.8 3.7 181 chr3L 12013876 intron rols - chr3L 12013966 intron rols - chr3L 12014057 intron rols - chr3L_25_12010001 chr3L_12010001 RAL-853_125b 2162 chr3L 12026362 12026369 chr3L 12026491 12026498 4 129 5.0 17.0 11.0 0.3 136 chr3L 12026362 intron rols - chr3L 12026430 intron rols - chr3L 12026498 intron rols - chr3L_4_12025001 chr3L_12025001 RAL-853_125b 2163 chr3L 12052666 12052735 chr3L 12052804 12052874 29 139 6.5 13.5 10.0 2.6 208 chr3L 12052666 intron rols - chr3L 12052770 intron rols - chr3L 12052874 intron rols - chr3L_29_12050001 chr3L_12050001 RAL-853_125b 2164 chr3L 12075385 12075454 chr3L 12075524 12075588 12 136 7.0 0.0 3.5 2.7 203 chr3L 12075385 intron Sema-5c - chr3L 12075486 intron Sema-5c - chr3L 12075588 intron Sema-5c - chr3L_12_12075001 chr3L_12075001 RAL-853_125b 2165 chr3L 12084454 12084524 chr3L 12084690 12084759 17 230 7.0 3.5 5.2 2.7 305 chr3L 12084454 intergenic not near genes chr3L 12084606 intergenic not near genes chr3L 12084759 intergenic not near genes chr3L_17_12080001 chr3L_12080001 RAL-853_125b 2166 chr3L 12089030 12089111 chr3L 12089160 12089241 28 130 4.5 9.0 6.8 3.6 211 chr3L 12089030 exon CG17154 + chr3L 12089136 3` UTR CG17154 + chr3L 12089241 intergenic CG17154 + chr3L_28_12085001 chr3L_12085001 RAL-853_125b 2167 chr3L 12092348 12092420 chr3L 12092475 12092547 14 127 0.5 7.0 3.8 2.9 199 chr3L 12092348 intergenic not near genes chr3L 12092448 intergenic not near genes chr3L 12092547 intergenic not near genes chr3L_14_12090001 chr3L_12090001 RAL-853_125b 2168 chr3L 12119713 12119788 chr3L 12119860 12119935 18 145 5.5 5.0 5.2 2.9 222 chr3L 12119713 3` UTR ssp + chr3L 12119824 intergenic ssp +,CG11560 + chr3L 12119935 intergenic CG11560 +,ssp + chr3L_18_12115001 chr3L_12115001 RAL-853_125b 2169 chr3L 12157127 12157177 chr3L 12158365 12158415 5 1238 39.5 52.0 45.8 0.1 1288 chr3L 12157127 3` UTR CG9760 - chr3L 12157771 3` UTR CG9760 - chr3L 12158415 intron CG9760 - chr3L_5_12155001 chr3L_12155001 RAL-853_125b 2170 chr3L 12158454 12158524 chr3L 12158724 12158795 22 270 37.0 40.0 38.5 0.6 341 chr3L 12158454 intron CG9760 - chr3L 12158624 intron CG9760 - chr3L 12158795 intron CG9760 - chr3L_22_12155001 chr3L_12155001 RAL-853_125b 2171 chr3L 12158781 12158795 chr3L 12160201 12160215 11 1420 96.5 106.0 101.2 0.1 1434 chr3L 12158781 intron CG9760 - chr3L 12159498 exon CG9760 - chr3L 12160215 intron CG9760 - chr3L_11_12155001 chr3L_12155001 RAL-853_125b 2172 chr3L 12158779 12158853 chr3L 12160218 12160273 36 1431 113.5 101.0 107.2 0.3 1494 chr3L 12158779 intron CG9760 - chr3L 12159526 exon CG9760 - chr3L 12160273 intron CG9760 - chr3L_36_12155001 chr3L_12155001 RAL-853_125b 2173 chr3L 12156437 12156456 chr3L 12160276 12160291 10 3838 50.5 87.5 69.0 0.1 3854 chr3L 12156437 3` UTR Nrx-IV + chr3L 12158364 intron CG9760 - chr3L 12160291 intron CG9760 - chr3L_10_12155001 chr3L_12155001 RAL-853_125b 2174 chr3L 12156432 12156516 chr3L 12160299 12160348 21 3839 64.0 76.0 70.0 0.3 3916 chr3L 12156432 3` UTR Nrx-IV + chr3L 12158390 intron CG9760 - chr3L 12160348 intron CG9760 - chr3L_21_12155001 chr3L_12155001 RAL-853_125b 2175 chr3L 12170740 12170818 chr3L 12170872 12170950 27 132 5.0 5.0 5.0 4.5 210 chr3L 12170740 intron Rh7 - chr3L 12170845 intron Rh7 - chr3L 12170950 intron Rh7 - chr3L_27_12170001 chr3L_12170001 RAL-853_125b 2176 chr3L 12220268 12220294 chr3L 12220401 12220414 11 132 11.0 17.5 14.2 0.7 146 chr3L 12220268 5` UTR app - chr3L 12220341 5` UTR app - chr3L 12220414 5` UTR app - chr3L_11_12220001 chr3L_12220001 RAL-853_125b 2177 chr3L 12220295 12220310 chr3L 12220398 12220443 8 121 7.5 17.5 12.5 0.6 148 chr3L 12220295 5` UTR app - chr3L 12220369 5` UTR app - chr3L 12220443 5` UTR app - chr3L_8_12220001 chr3L_12220001 RAL-853_125b 2178 chr3L 12223425 12223431 chr3L 12223537 12223560 4 120 11.5 9.0 10.2 0.4 135 chr3L 12223425 intron app - chr3L 12223492 intron app - chr3L 12223560 intron app - chr3L_4_12220001 chr3L_12220001 RAL-853_125b 2179 chr3L 12251620 12251639 chr3L 12251746 12251765 7 126 1.0 10.0 5.5 1.1 145 chr3L 12251620 intron app - chr3L 12251692 intron app - chr3L 12251765 intron app - chr3L_7_12250001 chr3L_12250001 RAL-853_125b 2180 chr3L 12283501 12283535 chr3L 12283631 12283665 14 130 7.5 5.0 6.2 1.9 164 chr3L 12283501 intergenic not near genes chr3L 12283583 intergenic not near genes chr3L 12283665 intergenic not near genes chr3L_14_12280001 chr3L_12280001 RAL-853_125b 2181 chr3L 12304043 12304108 chr3L 12304167 12304234 18 122 17.5 19.0 18.2 0.9 191 chr3L 12304043 intergenic not near genes chr3L 12304138 intergenic not near genes chr3L 12304234 intergenic not near genes chr3L_18_12300001 chr3L_12300001 RAL-853_125b 2182 chr3L 12307559 12307592 chr3L 12307689 12307722 6 130 9.5 0.0 4.8 1.0 163 chr3L 12307559 intergenic not near genes chr3L 12307640 intergenic not near genes chr3L 12307722 intergenic not near genes chr3L_6_12305001 chr3L_12305001 RAL-853_125b 2183 chr3L 12321681 12321688 chr3L 12321821 12321828 4 140 9.0 10.5 9.8 0.4 147 chr3L 12321681 intergenic not near genes chr3L 12321754 intergenic not near genes chr3L 12321828 intergenic not near genes chr3L_4_12320001 chr3L_12320001 RAL-853_125b 2184 chr3L 12326713 12326763 chr3L 12326823 12326889 12 123 16.5 16.5 16.5 0.7 176 chr3L 12326713 intergenic not near genes chr3L 12326801 intergenic not near genes chr3L 12326889 intergenic not near genes chr3L_12_12325001 chr3L_12325001 RAL-853_125b 2185 chr3L 12335339 12335415 chr3L 12335467 12335478 31 110 15.0 7.5 11.2 2.5 139 chr3L 12335339 exon CG32105 + chr3L 12335408 exon CG32105 + chr3L 12335478 3` UTR CG32105 + chr3L_31_12335001 chr3L_12335001 RAL-853_125b 2186 chr3L 12353880 12353946 chr3L 12354008 12354072 16 133 14.5 16.5 15.5 1.0 192 chr3L 12353880 intergenic not near genes chr3L 12353976 intergenic not near genes chr3L 12354072 intergenic not near genes chr3L_16_12350001 chr3L_12350001 RAL-853_125b 2187 chr3L 12364129 12364168 chr3L 12364316 12364355 6 187 10.5 10.0 10.2 0.5 226 chr3L 12364129 intergenic not near genes chr3L 12364242 intergenic not near genes chr3L 12364355 intergenic not near genes chr3L_6_12360001 chr3L_12360001 RAL-853_125b 2188 chr3L 12369499 12369564 chr3L 12369638 12369704 17 170 8.5 1.5 5.0 2.8 205 chr3L 12369499 intron Ncc69 - chr3L 12369602 intron Ncc69 - chr3L 12369704 intron Ncc69 - chr3L_17_12365001 chr3L_12365001 RAL-853_125b 2189 chr3L 12381532 12381550 chr3L 12381660 12381678 4 129 2.0 11.0 6.5 0.5 146 chr3L 12381532 intron Ncc69 - chr3L 12381605 intron Ncc69 - chr3L 12381678 intron Ncc69 - chr3L_4_12380001 chr3L_12380001 RAL-853_125b 2190 chr3L 12458489 12458503 chr3L 12458638 12458652 5 148 2.5 12.5 7.5 0.6 163 chr3L 12458489 intergenic not near genes chr3L 12458570 intergenic not near genes chr3L 12458652 intergenic not near genes chr3L_5_12455001 chr3L_12455001 RAL-853_125b 2191 chr3L 12467206 12467281 chr3L 12467341 12467416 18 135 4.5 6.0 5.2 2.9 210 chr3L 12467206 intron eyg - chr3L 12467311 intron eyg - chr3L 12467416 intron eyg - chr3L_18_12465001 chr3L_12465001 RAL-853_125b 2192 chr3L 12491675 12491711 chr3L 12491808 12491844 9 133 0.0 7.5 3.8 1.9 169 chr3L 12491675 intergenic CG10657 -,CR45682 +,CR45681 + chr3L 12491760 intergenic CG10657 -,CR45682 + chr3L 12491844 3` UTR,5` UTR CG10657 -,CR45682 + chr3L_9_12490001 chr3L_12490001 RAL-853_125b 2193 chr3L 12578011 12578040 chr3L 12578149 12578178 5 138 2.0 0.0 1.0 2.5 167 chr3L 12578011 intergenic not near genes chr3L 12578094 intergenic not near genes chr3L 12578178 intergenic not near genes chr3L_5_12575001 chr3L_12575001 RAL-853_125b 2194 chr3L 12591590 12591599 chr3L 12591717 12591726 8 127 28.5 13.5 21.0 0.4 136 chr3L 12591590 intron ara + chr3L 12591658 intron ara + chr3L 12591726 intron ara + chr3L_8_12590001 chr3L_12590001 RAL-853_125b 2195 chr3L 12591603 12591637 chr3L 12591710 12591725 12 114 19.5 13.0 16.2 0.7 122 chr3L 12591603 intron ara + chr3L 12591664 intron ara + chr3L 12591725 intron ara + chr3L_12_12590001 chr3L_12590001 RAL-853_125b 2196 chr3L 12622675 12622730 chr3L 12622806 12622861 12 131 0.0 8.5 4.2 2.3 186 chr3L 12622675 intergenic not near genes chr3L 12622768 intergenic not near genes chr3L 12622861 intergenic not near genes chr3L_12_12620001 chr3L_12620001 RAL-853_125b 2197 chr3L 12626124 12626156 chr3L 12626283 12626315 18 159 5.5 9.0 7.2 2.2 191 chr3L 12626124 intergenic not near genes chr3L 12626220 intergenic not near genes chr3L 12626315 intergenic not near genes chr3L_18_12625001 chr3L_12625001 RAL-853_125b 2198 chr3L 12647900 12647937 chr3L 12648026 12648063 15 125 11.0 0.5 5.8 2.2 163 chr3L 12647900 5` UTR CR32111 + chr3L 12647982 5` UTR CR32111 + chr3L 12648063 5` UTR CR32111 + chr3L_15_12645001 chr3L_12645001 RAL-853_125b 2199 chr3L 12661964 12662035 chr3L 12662124 12662195 13 149 3.5 5.0 4.2 2.5 231 chr3L 12661964 5` UTR CR44552 + chr3L 12662080 5` UTR CR44552 + chr3L 12662195 5` UTR CR44552 + chr3L_13_12660001 chr3L_12660001 RAL-853_125b 2200 chr3L 12685194 12685209 chr3L 12685331 12685346 5 137 6.0 0.0 3.0 1.2 152 chr3L 12685194 intergenic not near genes chr3L 12685270 intergenic not near genes chr3L 12685346 intergenic not near genes chr3L_5_12685001 chr3L_12685001 RAL-853_125b 2201 chr3L 12727985 12728019 chr3L 12728119 12728153 13 134 11.0 7.5 9.2 1.3 168 chr3L 12727985 intergenic not near genes chr3L 12728069 intergenic not near genes chr3L 12728153 intergenic not near genes chr3L_13_12725001 chr3L_12725001 RAL-853_125b 2202 chr3L 12808614 12808635 chr3L 12808746 12808767 10 131 20.0 11.0 15.5 0.6 153 chr3L 12808614 intron Sap130 + chr3L 12808690 intron Sap130 + chr3L 12808767 intron,5` UTR Sap130 +,CG32110 + chr3L_10_12805001 chr3L_12805001 RAL-853_125b 2203 chr3L 12808636 12808681 chr3L 12808742 12808813 20 127 9.5 10.0 9.8 1.9 177 chr3L 12808636 intron Sap130 + chr3L 12808724 intron,5` UTR Sap130 +,CG32110 + chr3L 12808813 intron,exon Sap130 +,CG32110 + chr3L_20_12805001 chr3L_12805001 RAL-853_125b 2204 chr3L 12857965 12858005 chr3L 12858110 12858150 16 145 0.0 6.5 3.2 3.8 185 chr3L 12857965 3` UTR CG32107 - chr3L 12858058 3` UTR CG32107 - chr3L 12858150 3` UTR CG32107 - chr3L_16_12855001 chr3L_12855001 RAL-853_125b 2205 chr3L 12874878 12874951 chr3L 12877220 12877287 jockey 30 2342 7.5 8.5 8.0 3.3 2409 chr3L 12874878 intergenic not near genes chr3L 12876082 intergenic not near genes chr3L 12877287 intergenic not near genes chr3L_30_12875001 chr3L_12875001 RAL-853_125b 2206 chr3L 12892874 12892905 chr3L 12893030 12893061 7 156 6.5 1.0 3.8 1.5 187 chr3L 12892874 intron CG14118 + chr3L 12892968 intron CG14118 + chr3L 12893061 intron CG14118 + chr3L_7_12890001 chr3L_12890001 RAL-853_125b 2207 chr3L 12894764 12894801 chr3L 12894892 12894929 22 127 12.5 13.5 13.0 1.6 165 chr3L 12894764 intergenic CG14118 + chr3L 12894846 intergenic CG14118 + chr3L 12894929 intergenic CG14118 + chr3L_22_12890001 chr3L_12890001 RAL-853_125b 2208 chr3L 12919232 12919304 chr3L 12924755 12924831 Rt1c 18 5513 5.5 9.0 7.2 2.2 5599 chr3L 12919232 intergenic not near genes chr3L 12922032 intergenic not near genes chr3L 12924831 intergenic not near genes chr3L_18_12920001 chr3L_12920001 RAL-853_125b 2209 chr3L 12957740 12957802 chr3L 12962272 12962334 copia 21 4531 9.5 7.0 8.2 2.3 4594 chr3L 12957740 intergenic not near genes chr3L 12960037 intergenic not near genes chr3L 12962334 intergenic not near genes chr3L_21_12960001 chr3L_12960001 RAL-853_125b 2210 chr3L 12978712 12978782 chr3L 12978841 12978911 12 129 8.5 0.5 4.5 2.2 199 chr3L 12978712 intergenic not near genes chr3L 12978812 intergenic not near genes chr3L 12978911 intergenic not near genes chr3L_12_12975001 chr3L_12975001 RAL-853_125b 2211 chr3L 13010909 13010978 chr3L 13011088 13011157 44 174 11.0 11.0 11.0 3.7 248 chr3L 13010909 exon CG11261 - chr3L 13011033 exon CG11261 - chr3L 13011157 exon CG11261 - chr3L_44_13010001 chr3L_13010001 RAL-853_125b 2212 chr3L 13017868 13017902 chr3L 13018000 13018034 7 132 8.0 7.0 7.5 0.8 166 chr3L 13017868 intergenic mRpL20 -,ste14 +,CR45445 - chr3L 13017951 intergenic mRpL20 -,ste14 +,CR45445 - chr3L 13018034 intergenic mRpL20 -,ste14 +,CR45445 - chr3L_7_13015001 chr3L_13015001 RAL-853_125b 2213 chr3L 13036533 13036596 chr3L 13036665 13036728 28 132 5.5 7.0 6.2 3.9 195 chr3L 13036533 intergenic CG17672 +,SRm160 + chr3L 13036630 intergenic CG17672 +,SRm160 + chr3L 13036728 intergenic SRm160 +,CG17672 + chr3L_28_13035001 chr3L_13035001 RAL-853_125b 2214 chr3L 13073993 13074070 chr3L 13074176 13074254 34 180 6.5 10.5 8.5 3.6 261 chr3L 13073993 intergenic not near genes chr3L 13074124 intergenic not near genes chr3L 13074254 intergenic not near genes chr3L_34_13070001 chr3L_13070001 RAL-853_125b 2215 chr3L 13128006 13128027 chr3L 13128229 13128240 8 222 20.5 12.0 16.2 0.5 234 chr3L 13128006 intergenic not near genes chr3L 13128123 intergenic not near genes chr3L 13128240 intergenic not near genes chr3L_8_13125001 chr3L_13125001 RAL-853_125b 2216 chr3L 13128028 13128082 chr3L 13128228 13128244 23 209 12.0 11.5 11.8 1.8 216 chr3L 13128028 intergenic not near genes chr3L 13128136 intergenic not near genes chr3L 13128244 intergenic not near genes chr3L_23_13125001 chr3L_13125001 RAL-853_125b 2217 chr3L 13142090 13142160 chr3L 13142225 13142295 27 135 8.5 4.5 6.5 3.6 205 chr3L 13142090 intergenic not near genes chr3L 13142192 intergenic not near genes chr3L 13142295 intergenic not near genes chr3L_27_13140001 chr3L_13140001 RAL-853_125b 2218 chr3L 13159241 13159270 chr3L 13159370 13159399 7 129 11.5 4.5 8.0 0.8 158 chr3L 13159241 intergenic not near genes chr3L 13159320 intergenic not near genes chr3L 13159399 intergenic not near genes chr3L_7_13155001 chr3L_13155001 RAL-853_125b 2219 chr3L 13161721 13161796 chr3L 13161847 13161922 22 125 8.0 4.5 6.2 3.1 201 chr3L 13161721 intergenic not near genes chr3L 13161822 intergenic not near genes chr3L 13161922 intergenic not near genes chr3L_22_13160001 chr3L_13160001 RAL-853_125b 2220 chr3L 13208315 13208371 chr3L 13208444 13208500 5 129 9.5 0.0 4.8 0.9 185 chr3L 13208315 intergenic CR45096 - chr3L 13208408 intergenic CR45096 - chr3L 13208500 intergenic CR45096 - chr3L_5_13205001 chr3L_13205001 RAL-853_125b 2221 chr3L 13223164 13223233 chr3L 13223291 13223360 16 122 4.5 9.0 6.8 2.1 196 chr3L 13223164 intergenic not near genes chr3L 13223262 intergenic not near genes chr3L 13223360 intergenic not near genes chr3L_16_13220001 chr3L_13220001 RAL-853_125b 2222 chr3L 13245059 13245068 chr3L 13245241 13245249 5 182 17.0 11.0 14.0 0.3 190 chr3L 13245059 intron caps + chr3L 13245154 intron caps + chr3L 13245249 intron caps + chr3L_5_13245001 chr3L_13245001 RAL-853_125b 2223 chr3L 13267242 13267316 chr3L 13267403 13267479 19 160 4.0 3.5 3.8 4.0 237 chr3L 13267242 intron caps + chr3L 13267360 intron caps + chr3L 13267479 intron caps + chr3L_19_13265001 chr3L_13265001 RAL-853_125b 2224 chr3L 13311763 13311821 chr3L 13311891 13311948 14 128 9.0 6.5 7.8 1.6 185 chr3L 13311763 intergenic not near genes chr3L 13311856 intergenic not near genes chr3L 13311948 intergenic not near genes chr3L_14_13310001 chr3L_13310001 RAL-853_125b 2225 chr3L 13315810 13315863 chr3L 13315947 13316000 6 137 5.0 3.5 4.2 1.2 190 chr3L 13315810 intergenic not near genes chr3L 13315905 intergenic not near genes chr3L 13316000 intergenic not near genes chr3L_6_13315001 chr3L_13315001 RAL-853_125b 2226 chr3L 13317746 13317813 chr3L 13317886 13317953 25 140 0.0 7.5 3.8 5.2 207 chr3L 13317746 intergenic not near genes chr3L 13317850 intergenic not near genes chr3L 13317953 intergenic not near genes chr3L_25_13315001 chr3L_13315001 RAL-853_125b 2227 chr3L 13337134 13337157 chr3L 13337275 13337298 8 141 0.0 9.0 4.5 1.5 164 chr3L 13337134 intergenic not near genes chr3L 13337216 intergenic not near genes chr3L 13337298 intergenic not near genes chr3L_8_13335001 chr3L_13335001 RAL-853_125b 2228 chr3L 13400482 13400544 chr3L 13400608 13400670 19 124 4.5 5.5 5.0 3.2 188 chr3L 13400482 intron sens - chr3L 13400576 intron sens - chr3L 13400670 intron sens - chr3L_19_13400001 chr3L_13400001 RAL-853_125b 2229 chr3L 13432253 13432317 chr3L 13432402 13432465 20 149 7.0 8.5 7.8 2.3 212 chr3L 13432253 intron CG10713 - chr3L 13432359 intron CG10713 - chr3L 13432465 intron CG10713 - chr3L_20_13430001 chr3L_13430001 RAL-853_125b 2230 chr3L 13486413 13486465 chr3L 13486709 13486761 19 296 0.5 14.5 7.5 2.2 348 chr3L 13486413 intergenic Abp1 -,Tgi + chr3L 13486587 intergenic Tgi +,Abp1 - chr3L 13486761 intergenic Tgi +,Abp1 - chr3L_19_13485001 chr3L_13485001 RAL-853_125b 2231 chr3L 13493557 13493625 chr3L 13493687 13493759 11 131 0.0 6.5 3.2 2.6 202 chr3L 13493557 intron Tgi + chr3L 13493658 intron Tgi + chr3L 13493759 intron Tgi + chr3L_11_13490001 chr3L_13490001 RAL-853_125b 2232 chr3L 13525115 13525181 chr3L 13532961 13533011 roo 34 7844 13.0 8.0 10.5 3.0 7896 chr3L 13525115 intergenic not near genes chr3L 13529063 intergenic not near genes chr3L 13533011 intergenic not near genes chr3L_34_13525001 chr3L_13525001 RAL-853_125b 2233 chr3L 13574582 13574619 chr3L 13580142 13580180 Rt1c 8 5554 8.5 9.0 8.8 0.8 5598 chr3L 13574582 intron bru-3 - chr3L 13577381 intron bru-3 - chr3L 13580180 intron bru-3 - chr3L_8_13575001 chr3L_13575001 RAL-853_125b 2234 chr3L 13629478 13629541 chr3L 13629639 13629701 25 159 7.0 9.0 8.0 2.8 223 chr3L 13629478 intron bru-3 - chr3L 13629590 intron bru-3 - chr3L 13629701 intron bru-3 - chr3L_25_13625001 chr3L_13625001 RAL-853_125b 2235 chr3L 13684514 13684574 chr3L 13684625 13684701 6 124 4.5 0.0 2.2 1.9 187 chr3L 13684514 intron bru-3 - chr3L 13684608 intron bru-3 - chr3L 13684701 intron bru-3 - chr3L_6_13680001 chr3L_13680001 RAL-853_125b 2236 chr3L 13701517 13701581 chr3L 13701690 13701754 24 173 14.5 11.0 12.8 1.7 237 chr3L 13701517 intron bru-3 - chr3L 13701636 intron bru-3 - chr3L 13701754 intron bru-3 - chr3L_24_13700001 chr3L_13700001 RAL-853_125b 2237 chr3L 13774591 13774664 chr3L 13774727 13774800 24 134 5.0 8.0 6.5 3.2 209 chr3L 13774591 intron bru-3 - chr3L 13774696 intron bru-3 - chr3L 13774800 intron bru-3 - chr3L_24_13770001 chr3L_13770001 RAL-853_125b 2238 chr3L 13804504 13804568 chr3L 13822840 13822904 roo 22 18335 10.0 5.5 7.8 2.5 18400 chr3L 13804504 intergenic not near genes chr3L 13813704 intergenic not near genes chr3L 13822904 intergenic not near genes chr3L_22_13810001 chr3L_13810001 RAL-853_125b 2239 chr3L 13833714 13833797 chr3L 13833901 13833982 13 186 5.0 5.0 5.0 2.2 268 chr3L 13833714 intergenic not near genes chr3L 13833848 intergenic not near genes chr3L 13833982 intergenic not near genes chr3L_13_13830001 chr3L_13830001 RAL-853_125b 2240 chr3L 13884334 13884378 chr3L 13884475 13884519 13 141 11.0 0.0 5.5 2.0 185 chr3L 13884334 intron dysc - chr3L 13884426 intron dysc - chr3L 13884519 intron dysc - chr3L_13_13880001 chr3L_13880001 RAL-853_125b 2241 chr3L 13920373 13920431 chr3L 13920503 13920561 23 130 6.0 9.5 7.8 2.6 188 chr3L 13920373 intron Rgl - chr3L 13920467 intron Rgl - chr3L 13920561 intron Rgl - chr3L_23_13920001 chr3L_13920001 RAL-853_125b 2242 chr3L 13954425 13954434 chr3L 13954554 13954563 4 129 9.0 13.0 11.0 0.3 138 chr3L 13954425 intron CG32137 + chr3L 13954494 intron CG32137 + chr3L 13954563 intron CG32137 + chr3L_4_13950001 chr3L_13950001 RAL-853_125b 2243 chr3L 13975222 13975261 chr3L 13975360 13975399 22 137 0.5 6.0 3.2 5.2 177 chr3L 13975222 intron Hsc70-1 + chr3L 13975310 intron Hsc70-1 + chr3L 13975399 intron Hsc70-1 + chr3L_22_13975001 chr3L_13975001 RAL-853_125b 2244 chr3L 13988691 13988755 chr3L 13989745 13989809 21 1050 21.5 33.5 27.5 0.7 1118 chr3L 13988691 intron CG17364 - chr3L 13989250 intron CG17364 - chr3L 13989809 intron CG17364 - chr3L_21_13985001 chr3L_13985001 RAL-853_125b 2245 chr3L 13988742 13988812 chr3L 13990301 13990371 32 1559 27.5 58.5 43.0 0.7 1629 chr3L 13988742 intron CG17364 - chr3L 13989556 intron CG17364 - chr3L 13990371 intron CG17364 - chr3L_32_13985001 chr3L_13985001 RAL-853_125b 2246 chr3L 13993961 13994014 chr3L 13994091 13994145 6 131 4.0 6.5 5.2 1.0 184 chr3L 13993961 intergenic 26-29-p + chr3L 13994053 intergenic 26-29-p + chr3L 13994145 intergenic 26-29-p + chr3L_6_13990001 chr3L_13990001 RAL-853_125b 2247 chr3L 14056731 14056743 chr3L 14056883 14056895 6 152 8.5 11.0 9.8 0.6 164 chr3L 14056731 intron CG32138 + chr3L 14056813 intron CG32138 + chr3L 14056895 intron CG32138 + chr3L_6_14055001 chr3L_14055001 RAL-853_125b 2248 chr3L 14076025 14076103 chr3L 14076154 14076232 24 129 3.0 0.0 1.5 9.6 207 chr3L 14076025 3` UTR,5` UTR Pex1 +,btl + chr3L 14076128 intron btl + chr3L 14076232 intron btl + chr3L_24_14075001 chr3L_14075001 RAL-853_125b 2249 chr3L 14089445 14089509 chr3L 14089592 14089656 16 147 6.0 1.5 3.8 3.3 211 chr3L 14089445 intergenic not near genes chr3L 14089550 intergenic not near genes chr3L 14089656 intergenic not near genes chr3L_16_14085001 chr3L_14085001 RAL-853_125b 2250 chr3L 14136743 14136802 chr3L 14136895 14136948 4 150 0.5 0.0 0.2 3.3 205 chr3L 14136743 intergenic not near genes chr3L 14136846 intergenic not near genes chr3L 14136948 intergenic not near genes chr3L_4_14135001 chr3L_14135001 RAL-853_125b 2251 chr3L 14141360 14141367 chr3L 14141497 14141504 5 137 9.0 0.0 4.5 0.9 144 chr3L 14141360 intergenic not near genes chr3L 14141432 intergenic not near genes chr3L 14141504 intergenic not near genes chr3L_5_14140001 chr3L_14140001 RAL-853_125b 2252 chr3L 14141712 14141766 chr3L 14141852 14141906 17 140 9.5 6.5 8.0 1.9 194 chr3L 14141712 intergenic not near genes chr3L 14141809 intergenic not near genes chr3L 14141906 intergenic not near genes chr3L_17_14140001 chr3L_14140001 RAL-853_125b 2253 chr3L 14141770 14141783 chr3L 14141848 14141923 9 131 7.5 5.0 6.2 1.2 153 chr3L 14141770 intergenic not near genes chr3L 14141846 intergenic not near genes chr3L 14141923 intergenic not near genes chr3L_9_14140001 chr3L_14140001 RAL-853_125b 2254 chr3L 5161877 5161880 chr3L 14159363 14159366 4 8997486 30.5 11.0 20.8 0.2 8997489 chr3L 5161877 intron shep - chr3L 9660622 intron fry - chr3L 14159366 intergenic not near genes chr3L_4_9660001 chr3L_9660001 RAL-853_125b 2255 chr3L 14168298 14168314 chr3L 14168429 14168445 7 131 1.5 0.0 0.8 3.9 147 chr3L 14168298 intergenic not near genes chr3L 14168372 intergenic not near genes chr3L 14168445 intergenic not near genes chr3L_7_14165001 chr3L_14165001 RAL-853_125b 2256 chr3L 14174070 14174091 chr3L 14174196 14174217 5 126 15.0 8.5 11.8 0.4 147 chr3L 14174070 intergenic not near genes chr3L 14174144 intergenic not near genes chr3L 14174217 intergenic not near genes chr3L_5_14170001 chr3L_14170001 RAL-853_125b 2257 chr3L 14175303 14175380 chr3L 14175501 14175578 14 198 4.0 5.5 4.8 2.4 275 chr3L 14175303 intergenic D - chr3L 14175440 intergenic D - chr3L 14175578 intergenic D - chr3L_14_14175001 chr3L_14175001 RAL-853_125b 2258 chr3L 14194674 14194734 chr3L 14194800 14194860 25 126 9.5 0.5 5.0 4.2 186 chr3L 14194674 intron nuf + chr3L 14194767 intron nuf + chr3L 14194860 intron nuf + chr3L_25_14190001 chr3L_14190001 RAL-853_125b 2259 chr3L 14196365 14196444 chr3L 14196500 14196579 24 135 4.0 6.5 5.2 3.9 214 chr3L 14196365 intron nuf + chr3L 14196472 intron nuf + chr3L 14196579 intron nuf + chr3L_24_14195001 chr3L_14195001 RAL-853_125b 2260 chr3L 14212872 14212881 chr3L 14213091 14213100 4 219 2.0 14.5 8.2 0.4 228 chr3L 14212872 intron nuf + chr3L 14212986 intron nuf + chr3L 14213100 exon nuf + chr3L_4_14210001 chr3L_14210001 RAL-853_125b 2261 chr3L 14214795 14214865 chr3L 14214921 14215000 15 128 0.0 2.5 1.2 6.8 205 chr3L 14214795 intron nuf + chr3L 14214898 intron nuf + chr3L 14215000 intron nuf + chr3L_15_14210001 chr3L_14210001 RAL-853_125b 2262 chr3L 14216159 14216228 chr3L 14216344 14216413 28 185 12.0 7.0 9.5 2.7 254 chr3L 14216159 intron nuf + chr3L 14216286 intron nuf + chr3L 14216413 intron nuf + chr3L_28_14215001 chr3L_14215001 RAL-853_125b 2263 chr3L 14223276 14223347 chr3L 14223436 14223512 44 164 5.0 5.5 5.2 7.1 236 chr3L 14223276 intron nuf + chr3L 14223394 intron nuf + chr3L 14223512 intron nuf + chr3L_44_14220001 chr3L_14220001 RAL-853_125b 2264 chr3L 14239938 14240007 chr3L 14240085 14240154 27 145 1.0 2.5 1.8 9.6 216 chr3L 14239938 intergenic CR45399 - chr3L 14240046 intergenic not near genes chr3L 14240154 intergenic not near genes chr3L_27_14240001 chr3L_14240001 RAL-853_125b 2265 chr3L 14250809 14250824 chr3L 14250932 14250956 5 129 14.5 5.5 10.0 0.5 147 chr3L 14250809 intergenic not near genes chr3L 14250882 intergenic not near genes chr3L 14250956 intergenic not near genes chr3L_5_14250001 chr3L_14250001 RAL-853_125b 2266 chr3L 14250825 14250868 chr3L 14250930 14251007 19 127 4.5 5.0 4.8 3.3 182 chr3L 14250825 intergenic not near genes chr3L 14250916 intergenic not near genes chr3L 14251007 intergenic not near genes chr3L_19_14250001 chr3L_14250001 RAL-853_125b 2267 chr3L 14267331 14267354 chr3L 14271821 14271844 F-element 7 4489 14.0 0.0 7.0 0.9 4513 chr3L 14267331 intergenic not near genes chr3L 14269588 intergenic not near genes chr3L 14271844 intergenic not near genes chr3L_7_14265001 chr3L_14265001 RAL-853_125b 2268 chr3L 14267391 14267405 chr3L 14271897 14271911 F-element 7 4506 5.5 5.5 5.5 1.1 4520 chr3L 14267391 intergenic not near genes chr3L 14269651 intergenic not near genes chr3L 14271911 intergenic not near genes chr3L_7_14265001 chr3L_14265001 RAL-853_125b 2269 chr3L 14295937 14296007 chr3L 14296473 14296512 roo 36 533 9.5 8.5 9.0 3.6 575 chr3L 14295937 intron fz + chr3L 14296224 intron fz + chr3L 14296512 intron fz + chr3L_36_14295001 chr3L_14295001 RAL-853_125b 2270 chr3L 14309569 14309604 chr3L 14309704 14309739 11 135 0.0 10.0 5.0 1.8 170 chr3L 14309569 intron fz + chr3L 14309654 intron fz + chr3L 14309739 intron fz + chr3L_11_14305001 chr3L_14305001 RAL-853_125b 2271 chr3L 14312006 14312055 chr3L 14316840 14316884 X-element 16 4847 3.5 3.0 3.2 3.8 4878 chr3L 14312006 exon fz + chr3L 14314445 intron fz + chr3L 14316884 intron fz + chr3L_16_14310001 chr3L_14310001 RAL-853_125b 2272 chr3L 14338258 14338324 chr3L 14338404 14338467 11 146 2.5 7.0 4.8 1.9 209 chr3L 14338258 intron fz + chr3L 14338362 intron fz + chr3L 14338467 intron fz + chr3L_11_14335001 chr3L_14335001 RAL-853_125b 2273 chr3L 14341397 14341439 chr3L 14341555 14341624 13 183 0.0 8.0 4.0 2.6 227 chr3L 14341397 intron fz + chr3L 14341510 intron fz + chr3L 14341624 intron fz + chr3L_13_14340001 chr3L_14340001 RAL-853_125b 2274 chr3L 14345864 14345932 chr3L 14346016 14346085 28 152 3.0 7.0 5.0 4.7 221 chr3L 14345864 intron fz + chr3L 14345974 intron fz + chr3L 14346085 intron fz + chr3L_28_14345001 chr3L_14345001 RAL-853_125b 2275 chr3L 14356474 14356546 chr3L 14356604 14356676 26 129 4.5 11.5 8.0 2.9 202 chr3L 14356474 intron fz + chr3L 14356575 intron fz + chr3L 14356676 intron fz + chr3L_26_14355001 chr3L_14355001 RAL-853_125b 2276 chr3L 14375604 14375668 chr3L 14375771 14375836 17 167 6.0 13.5 9.8 1.6 232 chr3L 14375604 intergenic not near genes chr3L 14375720 intergenic not near genes chr3L 14375836 intergenic not near genes chr3L_17_14375001 chr3L_14375001 RAL-853_125b 2277 chr3L 14392156 14392183 chr3L 14392288 14392315 7 132 8.5 0.0 4.2 1.3 159 chr3L 14392156 intergenic not near genes chr3L 14392236 intergenic not near genes chr3L 14392315 intergenic not near genes chr3L_7_14390001 chr3L_14390001 RAL-853_125b 2278 chr3L 14399126 14399142 chr3L 14399265 14399281 5 139 18.0 0.0 9.0 0.5 155 chr3L 14399126 intergenic not near genes chr3L 14399204 intergenic not near genes chr3L 14399281 intergenic not near genes chr3L_5_14395001 chr3L_14395001 RAL-853_125b 2279 chr3L 14411815 14411896 chr3L 14411944 14412013 25 128 9.5 7.5 8.5 2.6 198 chr3L 14411815 intron CG3919 + chr3L 14411914 intron CG3919 + chr3L 14412013 intron CG3919 + chr3L_25_14410001 chr3L_14410001 RAL-853_125b 2280 chr3L 14417513 14417577 chr3L 14417654 14417717 11 141 4.5 10.0 7.2 1.3 204 chr3L 14417513 intron bbg - chr3L 14417615 intron bbg - chr3L 14417717 intron bbg - chr3L_11_14415001 chr3L_14415001 RAL-853_125b 2281 chr3L 14439198 14439240 chr3L 14439387 14439446 19 209 4.0 5.0 4.5 3.5 248 chr3L 14439198 intron bbg - chr3L 14439322 intron bbg - chr3L 14439446 intron bbg - chr3L_19_14435001 chr3L_14435001 RAL-853_125b 2282 chr3L 14454041 14454066 chr3L 14454180 14454201 6 137 8.0 20.5 14.2 0.4 160 chr3L 14454041 intron bbg - chr3L 14454121 intron bbg - chr3L 14454201 intron bbg - chr3L_6_14450001 chr3L_14450001 RAL-853_125b 2283 chr3L 14467081 14467144 chr3L 14467217 14467282 23 134 8.5 4.5 6.5 3.1 201 chr3L 14467081 intron bbg - chr3L 14467182 intron bbg - chr3L 14467282 intron bbg - chr3L_23_14465001 chr3L_14465001 RAL-853_125b 2284 chr3L 14468420 14468466 chr3L 14473676 14473722 copia 21 5256 9.5 10.5 10.0 1.9 5302 chr3L 14468420 intron bbg - chr3L 14471071 intron bbg - chr3L 14473722 intron bbg - chr3L_21_14470001 chr3L_14470001 RAL-853_125b 2285 chr3L 14473853 14473861 chr3L 14473979 14473988 5 127 18.0 11.5 14.8 0.3 135 chr3L 14473853 intron bbg - chr3L 14473920 intron bbg - chr3L 14473988 intron bbg - chr3L_5_14470001 chr3L_14470001 RAL-853_125b 2286 chr3L 14473863 14473878 chr3L 14473968 14474005 12 120 15.5 10.5 13.0 0.9 142 chr3L 14473863 intron bbg - chr3L 14473934 intron bbg - chr3L 14474005 intron bbg - chr3L_12_14470001 chr3L_14470001 RAL-853_125b 2287 chr3L 14485977 14486046 chr3L 14486108 14486177 28 130 7.0 11.5 9.2 2.7 200 chr3L 14485977 intron bbg - chr3L 14486077 intron bbg - chr3L 14486177 intron bbg - chr3L_28_14485001 chr3L_14485001 RAL-853_125b 2288 chr3L 14522057 14522126 chr3L 14522206 14522275 21 149 6.0 8.0 7.0 2.6 218 chr3L 14522057 intron bbg - chr3L 14522166 intron bbg - chr3L 14522275 intron bbg - chr3L_21_14520001 chr3L_14520001 RAL-853_125b 2289 chr3L 14524291 14524298 chr3L 14529096 14529103 F-element 5 4805 9.5 0.5 5.0 0.8 4812 chr3L 14524291 intron bbg - chr3L 14526697 intron bbg - chr3L 14529103 intron bbg - chr3L_5_14525001 chr3L_14525001 RAL-853_125b 2290 chr3L 14537284 14537298 chr3L 14537428 14537442 9 144 0.0 7.0 3.5 2.0 158 chr3L 14537284 intergenic CG43246 +,Mpcp + chr3L 14537363 intergenic CG43246 +,Mpcp + chr3L 14537442 intergenic CG43246 +,Mpcp + chr3L_9_14535001 chr3L_14535001 RAL-853_125b 2291 chr3L 14546762 14546816 chr3L 14546913 14546967 9 151 0.0 6.5 3.2 2.1 205 chr3L 14546762 intron CG9238 - chr3L 14546864 intron CG9238 - chr3L 14546967 intron CG9238 - chr3L_9_14545001 chr3L_14545001 RAL-853_125b 2292 chr3L 14565706 14565766 chr3L 14565847 14565907 25 140 11.5 0.5 6.0 3.6 201 chr3L 14565706 intergenic not near genes chr3L 14565806 intergenic not near genes chr3L 14565907 intergenic not near genes chr3L_25_14565001 chr3L_14565001 RAL-853_125b 2293 chr3L 14571602 14571669 chr3L 14571728 14571798 30 129 6.0 7.5 6.8 3.8 196 chr3L 14571602 intergenic not near genes chr3L 14571700 intergenic not near genes chr3L 14571798 intergenic not near genes chr3L_30_14570001 chr3L_14570001 RAL-853_125b 2294 chr3L 14585564 14585632 chr3L 14585692 14585760 25 127 9.5 8.5 9.0 2.5 196 chr3L 14585564 intron HGTX - chr3L 14585662 intron HGTX - chr3L 14585760 intron HGTX - chr3L_25_14585001 chr3L_14585001 RAL-853_125b 2295 chr3L 14654675 14654716 chr3L 14654812 14654853 12 137 8.0 11.5 9.8 1.1 178 chr3L 14654675 intron dlp + chr3L 14654764 intron dlp + chr3L 14654853 intron dlp + chr3L_12_14650001 chr3L_14650001 RAL-853_125b 2296 chr3L 14711522 14711584 chr3L 14712169 14712231 15 645 7.5 6.0 6.8 1.9 709 chr3L 14711522 intron ome + chr3L 14711876 intron ome + chr3L 14712231 intron ome + chr3L_15_14710001 chr3L_14710001 RAL-853_125b 2297 chr3L 14721184 14721202 chr3L 14723074 14723094 Rt1c 8 1891 8.5 17.5 13.0 0.6 1910 chr3L 14721184 intron ome + chr3L 14722139 intron ome + chr3L 14723094 intron ome + chr3L_8_14720001 chr3L_14720001 RAL-853_125b 2298 chr3L 14725565 14725605 chr3L 14728604 14728649 Doc 6 3043 7.0 10.5 8.8 0.6 3084 chr3L 14725565 intron ome + chr3L 14727107 intron ome + chr3L 14728649 intron ome + chr3L_6_14725001 chr3L_14725001 RAL-853_125b 2299 chr3L 14741098 14741167 chr3L 14741226 14741295 29 128 9.0 12.5 10.8 2.5 197 chr3L 14741098 intron ome + chr3L 14741196 intron ome + chr3L 14741295 intron ome + chr3L_29_14740001 chr3L_14740001 RAL-853_125b 2300 chr3L 14861759 14861807 chr3L 14861889 14861937 18 129 6.5 6.5 6.5 2.4 178 chr3L 14861759 intron CG17839 + chr3L 14861848 intron CG17839 + chr3L 14861937 intron CG17839 + chr3L_18_14860001 chr3L_14860001 RAL-853_125b 2301 chr3L 14912678 14912727 chr3L 14915202 14915276 32 2526 58.5 46.0 52.2 0.6 2598 chr3L 14912678 intron DCX-EMAP + chr3L 14913977 intron DCX-EMAP + chr3L 14915276 intron DCX-EMAP + chr3L_32_14910001 chr3L_14910001 RAL-853_125b 2302 chr3L 14918459 14918524 chr3L 14918596 14918661 10 136 4.0 9.5 6.8 1.3 202 chr3L 14918459 intron DCX-EMAP + chr3L 14918560 intron DCX-EMAP + chr3L 14918661 intron DCX-EMAP + chr3L_10_14915001 chr3L_14915001 RAL-853_125b 2303 chr3L 14957954 14957967 chr3L 14958086 14958099 4 132 2.0 0.0 1.0 2.0 145 chr3L 14957954 intergenic not near genes chr3L 14958026 intergenic not near genes chr3L 14958099 intergenic not near genes chr3L_4_14955001 chr3L_14955001 RAL-853_125b 2304 chr3L 14968246 14968321 chr3L 14968586 14968661 20 340 7.0 4.5 5.8 2.9 415 chr3L 14968246 intergenic not near genes chr3L 14968454 intergenic not near genes chr3L 14968661 intergenic not near genes chr3L_20_14965001 chr3L_14965001 RAL-853_125b 2305 chr3L 14970718 14970755 chr3L 14971078 14971115 F-element 5 360 6.0 3.0 4.5 0.9 397 chr3L 14970718 intergenic Tom + chr3L 14970916 intergenic not near genes chr3L 14971115 intergenic not near genes chr3L_5_14970001 chr3L_14970001 RAL-853_125b 2306 chr3L 15044509 15044568 chr3L 15044636 15044695 6 127 5.5 9.0 7.2 0.7 186 chr3L 15044509 intron Sytbeta - chr3L 15044602 intron Sytbeta - chr3L 15044695 intron Sytbeta - chr3L_6_15040001 chr3L_15040001 RAL-853_125b 2307 chr3L 15048129 15048186 chr3L 15048443 15048500 22 315 48.0 45.0 46.5 0.5 371 chr3L 15048129 intron Sytbeta - chr3L 15048314 intron Sytbeta - chr3L 15048500 intron Sytbeta - chr3L_22_15045001 chr3L_15045001 RAL-853_125b 2308 chr3L 15085003 15085074 chr3L 15086219 15086290 1360 24 1216 8.5 5.5 7.0 3.0 1287 chr3L 15085003 intron cp309 - chr3L 15085646 intron cp309 - chr3L 15086290 intron cp309 - chr3L_24_15085001 chr3L_15085001 RAL-853_125b 2309 chr3L 15094921 15094964 chr3L 15095067 15095110 12 146 0.5 7.5 4.0 2.4 189 chr3L 15094921 intergenic cp309 -,CG6945 -,Aats-gly + chr3L 15095016 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095110 intergenic Aats-gly +,cp309 -,CG6945 - chr3L_12_15095001 chr3L_15095001 RAL-853_125b 2310 chr3L 15146116 15146173 chr3L 15146241 15146312 9 129 0.0 11.0 5.5 1.4 196 chr3L 15146116 3` UTR Pex3 + chr3L 15146214 3` UTR Pex3 + chr3L 15146312 3` UTR Pex3 + chr3L_9_15145001 chr3L_15145001 RAL-853_125b 2311 chr3L 15164974 15165046 chr3L 15165122 15165195 12 148 0.0 3.5 1.8 4.3 221 chr3L 15164974 intergenic not near genes chr3L 15165084 intergenic not near genes chr3L 15165195 intergenic not near genes chr3L_12_15165001 chr3L_15165001 RAL-853_125b 2312 chr3L 15174576 15174610 chr3L 15174735 15174763 15 157 6.5 12.0 9.2 1.5 187 chr3L 15174576 intergenic not near genes chr3L 15174670 intergenic not near genes chr3L 15174763 intergenic not near genes chr3L_15_15170001 chr3L_15170001 RAL-853_125b 2313 chr3L 15219698 15219770 chr3L 15219830 15219902 19 132 5.5 4.5 5.0 3.2 204 chr3L 15219698 intergenic not near genes chr3L 15219800 intergenic not near genes chr3L 15219902 intergenic not near genes chr3L_19_15215001 chr3L_15215001 RAL-853_125b 2314 chr3L 15227899 15227910 chr3L 15228002 15228026 6 122 1.5 14.5 8.0 0.7 127 chr3L 15227899 intergenic not near genes chr3L 15227962 intergenic not near genes chr3L 15228026 intergenic not near genes chr3L_6_15225001 chr3L_15225001 RAL-853_125b 2315 chr3L 15232460 15232522 chr3L 15232591 15232653 24 131 5.5 5.5 5.5 3.7 193 chr3L 15232460 intergenic not near genes chr3L 15232556 intergenic not near genes chr3L 15232653 intergenic not near genes chr3L_24_15230001 chr3L_15230001 RAL-853_125b 2316 chr3L 15257390 15257445 chr3L 15257653 15257708 12 263 5.0 0.5 2.8 3.2 318 chr3L 15257390 intergenic not near genes chr3L 15257549 intergenic not near genes chr3L 15257708 intergenic not near genes chr3L_12_15255001 chr3L_15255001 RAL-853_125b 2317 chr3L 15295732 15295789 chr3L 15298624 15298682 gypsy5 21 2891 8.0 7.0 7.5 2.5 2950 chr3L 15295732 intergenic not near genes chr3L 15297207 intergenic not near genes chr3L 15298682 intergenic Best4 + chr3L_21_15295001 chr3L_15295001 RAL-853_125b 2318 chr3L 15328529 15328607 chr3L 15328664 15328742 16 130 10.5 9.0 9.8 1.5 213 chr3L 15328529 intergenic not near genes chr3L 15328636 intergenic not near genes chr3L 15328742 intergenic not near genes chr3L_16_15325001 chr3L_15325001 RAL-853_125b 2319 chr3L 15333093 15333169 chr3L 15333223 15333284 10 129 6.5 7.5 7.0 1.2 191 chr3L 15333093 intergenic CR43247 + chr3L 15333188 intergenic CR43247 + chr3L 15333284 intergenic CR43247 + chr3L_10_15330001 chr3L_15330001 RAL-853_125b 2320 chr3L 15405981 15406048 chr3L 15406113 15406146 15 130 3.0 7.5 5.2 2.4 165 chr3L 15405981 intergenic not near genes chr3L 15406064 intergenic not near genes chr3L 15406146 intergenic not near genes chr3L_15_15405001 chr3L_15405001 RAL-853_125b 2321 chr3L 15420310 15420328 chr3L 15420439 15420457 4 129 7.5 5.5 6.5 0.5 147 chr3L 15420310 intergenic not near genes chr3L 15420384 intergenic not near genes chr3L 15420457 intergenic not near genes chr3L_4_15420001 chr3L_15420001 RAL-853_125b 2322 chr3L 15423715 15423775 chr3L 15426609 15426669 opus 13 2894 6.0 5.0 5.5 2.0 2954 chr3L 15423715 intergenic not near genes chr3L 15425192 intergenic not near genes chr3L 15426669 intergenic not near genes chr3L_13_15425001 chr3L_15425001 RAL-853_125b 2323 chr3L 15465997 15466131 chr3L 15466129 15466277 21 158 0.0 0.0 0.0 21.0 280 chr3L 15465997 intergenic not near genes chr3L 15466137 intergenic not near genes chr3L 15466277 intergenic not near genes chr3L_21_15465001 chr3L_15465001 RAL-853_125b 2324 chr3L 15474654 15474688 chr3L 15474843 15474877 10 189 4.5 1.5 3.0 2.5 223 chr3L 15474654 intergenic not near genes chr3L 15474766 intergenic not near genes chr3L 15474877 intergenic not near genes chr3L_10_15470001 chr3L_15470001 RAL-853_125b 2325 chr3L 15537912 15537936 chr3L 15538038 15538062 14 125 10.5 1.0 5.8 2.1 150 chr3L 15537912 intron CrebA + chr3L 15537987 intron CrebA + chr3L 15538062 intron CrebA + chr3L_14_15535001 chr3L_15535001 RAL-853_125b 2326 chr3L 15540904 15540923 chr3L 15541030 15541049 4 124 7.5 8.0 7.8 0.5 145 chr3L 15540904 intron CrebA + chr3L 15540976 intron CrebA + chr3L 15541049 intron CrebA + chr3L_4_15540001 chr3L_15540001 RAL-853_125b 2327 chr3L 15541576 15541642 chr3L 15541717 15541783 23 141 9.5 0.5 5.0 3.8 207 chr3L 15541576 intron CrebA + chr3L 15541680 intron CrebA + chr3L 15541783 intron CrebA + chr3L_23_15540001 chr3L_15540001 RAL-853_125b 2328 chr3L 15541903 15541972 chr3L 15542046 15542116 18 144 0.0 7.0 3.5 4.0 213 chr3L 15541903 intron CrebA + chr3L 15542010 intron CrebA + chr3L 15542116 intron CrebA + chr3L_18_15540001 chr3L_15540001 RAL-853_125b 2329 chr3L 15600120 15600196 chr3L 15600255 15600347 8 148 8.5 0.0 4.2 1.5 227 chr3L 15600120 intron RhoGAP71E + chr3L 15600234 intron RhoGAP71E + chr3L 15600347 intron RhoGAP71E + chr3L_8_15600001 chr3L_15600001 RAL-853_125b 2330 chr3L 15615887 15615943 chr3L 15616033 15616089 19 146 10.5 12.0 11.2 1.6 202 chr3L 15615887 intron comm3 - chr3L 15615988 intron comm3 - chr3L 15616089 intron comm3 - chr3L_19_15615001 chr3L_15615001 RAL-853_125b 2331 chr3L 15633144 15633159 chr3L 15633274 15633289 8 130 11.0 2.5 6.8 1.0 145 chr3L 15633144 intron comm3 - chr3L 15633216 intron comm3 - chr3L 15633289 intron comm3 - chr3L_8_15630001 chr3L_15630001 RAL-853_125b 2332 chr3L 15641191 15641270 chr3L 15641321 15641400 8 127 4.0 4.5 4.2 1.5 209 chr3L 15641191 intron comm3 - chr3L 15641296 intron comm3 - chr3L 15641400 intron comm3 - chr3L_8_15640001 chr3L_15640001 RAL-853_125b 2333 chr3L 15641778 15641813 chr3L 15641913 15641948 10 134 0.5 15.5 8.0 1.1 170 chr3L 15641778 intron comm3 - chr3L 15641863 intron comm3 - chr3L 15641948 intron comm3 - chr3L_10_15640001 chr3L_15640001 RAL-853_125b 2334 chr3L 15658426 15658500 chr3L 15658565 15658617 26 138 4.0 8.5 6.2 3.6 191 chr3L 15658426 intergenic Eig71Eg + chr3L 15658522 intergenic Eig71Eg +,Eig71Eh - chr3L 15658617 intergenic Eig71Eh -,Eig71Eg + chr3L_26_15655001 chr3L_15655001 RAL-853_125b 2335 chr3L 15739965 15739978 chr3L 15740108 15740121 4 143 5.5 4.0 4.8 0.7 156 chr3L 15739965 intergenic not near genes chr3L 15740043 intergenic not near genes chr3L 15740121 intergenic not near genes chr3L_4_15740001 chr3L_15740001 RAL-853_125b 2336 chr3L 15756818 15756910 chr3L 15756961 15757042 14 138 2.0 0.0 1.0 7.0 224 chr3L 15756818 intergenic not near genes chr3L 15756930 intergenic not near genes chr3L 15757042 intergenic not near genes chr3L_14_15755001 chr3L_15755001 RAL-853_125b 2337 chr3L 15760655 15760713 chr3L 15760780 15760825 5 128 5.5 0.0 2.8 1.3 170 chr3L 15760655 intergenic not near genes chr3L 15760740 intergenic not near genes chr3L 15760825 intergenic not near genes chr3L_5_15760001 chr3L_15760001 RAL-853_125b 2338 chr3L 15769114 15769123 chr3L 15769255 15769264 5 141 0.0 11.0 5.5 0.8 150 chr3L 15769114 intergenic not near genes chr3L 15769189 intergenic not near genes chr3L 15769264 intergenic not near genes chr3L_5_15765001 chr3L_15765001 RAL-853_125b 2339 chr3L 15803197 15803249 chr3L 15803380 15803410 11 188 8.0 3.0 5.5 1.7 213 chr3L 15803197 intergenic not near genes chr3L 15803304 intergenic not near genes chr3L 15803410 intergenic not near genes chr3L_11_15800001 chr3L_15800001 RAL-853_125b 2340 chr3L 15832215 15832275 chr3L 15832344 15832406 20 130 10.0 12.5 11.2 1.6 191 chr3L 15832215 intergenic dbo +,CG12713 + chr3L 15832310 intergenic CG12713 +,dbo + chr3L 15832406 intergenic CG12713 +,dbo + chr3L_20_15830001 chr3L_15830001 RAL-853_125b 2341 chr3L 15840383 15840469 chr3L 15840521 15840604 17 132 2.5 5.0 3.8 3.5 221 chr3L 15840383 intron CG32150 - chr3L 15840494 intron CG32150 - chr3L 15840604 intron CG32150 - chr3L_17_15840001 chr3L_15840001 RAL-853_125b 2342 chr3L 15871555 15871613 chr3L 15871689 15871740 8 133 8.0 0.0 4.0 1.6 185 chr3L 15871555 intron pHCl - chr3L 15871648 intron pHCl - chr3L 15871740 intron pHCl - chr3L_8_15870001 chr3L_15870001 RAL-853_125b 2343 chr3L 15899228 15899255 chr3L 15899807 15899842 jockey 12 608 2.5 7.0 4.8 2.1 614 chr3L 15899228 intergenic pHCl - chr3L 15899535 intergenic not near genes chr3L 15899842 intergenic sff - chr3L_12_15895001 chr3L_15895001 RAL-853_125b 2344 chr3L 15917158 15917226 chr3L 15918913 15918981 22 1755 6.0 1.0 3.5 4.9 1823 chr3L 15917158 intron sff - chr3L 15918070 intron sff - chr3L 15918981 intron sff - chr3L_22_15915001 chr3L_15915001 RAL-853_125b 2345 chr3L 15929160 15929221 chr3L 15938357 15938418 roo 17 9197 4.5 7.5 6.0 2.4 9258 chr3L 15929160 intron Pka-C3 - chr3L 15933789 intron Pka-C3 - chr3L 15938418 intron Pka-C3 - chr3L_17_15930001 chr3L_15930001 RAL-853_125b 2346 chr3L 15946509 15946537 chr3L 15946645 15946673 15 136 5.5 11.5 8.5 1.6 164 chr3L 15946509 intron Pka-C3 - chr3L 15946591 intron Pka-C3 - chr3L 15946673 intron Pka-C3 - chr3L_15_15945001 chr3L_15945001 RAL-853_125b 2347 chr3L 15948709 15948751 chr3L 15948834 15948874 13 127 8.5 10.0 9.2 1.3 165 chr3L 15948709 intron Pka-C3 - chr3L 15948792 intron Pka-C3 - chr3L 15948874 intron Pka-C3 - chr3L_13_15945001 chr3L_15945001 RAL-853_125b 2348 chr3L 15948752 15948769 chr3L 15948829 15948868 10 120 4.5 10.0 7.2 1.2 116 chr3L 15948752 intron Pka-C3 - chr3L 15948810 intron Pka-C3 - chr3L 15948868 intron Pka-C3 - chr3L_10_15945001 chr3L_15945001 RAL-853_125b 2349 chr3L 15956216 15956290 chr3L 15956350 15956423 30 134 8.0 7.0 7.5 3.5 207 chr3L 15956216 3` UTR GXIVsPLA2 + chr3L 15956320 3` UTR GXIVsPLA2 + chr3L 15956423 3` UTR GXIVsPLA2 + chr3L_30_15955001 chr3L_15955001 RAL-853_125b 2350 chr3L 15989187 15989226 chr3L 15989320 15989321 20 130 9.0 4.5 6.8 2.6 134 chr3L 15989187 exon Hip14 + chr3L 15989254 intron Hip14 + chr3L 15989321 intron Hip14 + chr3L_20_15985001 chr3L_15985001 RAL-853_125b 2351 chr3L 16047752 16047770 chr3L 16047881 16047899 6 129 0.0 10.0 5.0 1.0 147 chr3L 16047752 intron th - chr3L 16047826 intron th - chr3L 16047899 intron th - chr3L_6_16045001 chr3L_16045001 RAL-853_125b 2352 chr3L 16070694 16070758 chr3L 16070820 16070885 21 126 5.0 9.5 7.2 2.6 191 chr3L 16070694 intron Mbs + chr3L 16070790 intron Mbs + chr3L 16070885 exon Mbs + chr3L_21_16070001 chr3L_16070001 RAL-853_125b 2353 chr3L 16072606 16072672 chr3L 16072794 16072835 34 185 8.0 6.5 7.2 4.1 229 chr3L 16072606 intron Mbs + chr3L 16072720 intron Mbs + chr3L 16072835 intron Mbs + chr3L_34_16070001 chr3L_16070001 RAL-853_125b 2354 chr3L 16158757 16158830 chr3L 16158891 16158965 13 135 4.5 4.5 4.5 2.4 208 chr3L 16158757 intron CG5151 - chr3L 16158861 intron CG5151 - chr3L 16158965 intron CG5151 - chr3L_13_16155001 chr3L_16155001 RAL-853_125b 2355 chr3L 16194290 16194297 chr3L 16194430 16194437 4 140 21.5 10.0 15.8 0.2 147 chr3L 16194290 intergenic not near genes chr3L 16194364 intergenic not near genes chr3L 16194437 intergenic not near genes chr3L_4_16190001 chr3L_16190001 RAL-853_125b 2356 chr3L 16194303 16194354 chr3L 16194428 16194494 11 126 9.0 10.0 9.5 1.0 191 chr3L 16194303 intergenic not near genes chr3L 16194398 intergenic not near genes chr3L 16194494 intergenic not near genes chr3L_11_16190001 chr3L_16190001 RAL-853_125b 2357 chr3L 16218345 16218414 chr3L 16218588 16218593 24 244 5.0 4.5 4.8 4.1 248 chr3L 16218345 intergenic not near genes chr3L 16218469 intergenic not near genes chr3L 16218593 intergenic not near genes chr3L_24_16215001 chr3L_16215001 RAL-853_125b 2358 chr3L 16220469 16220519 chr3L 16220604 16220654 9 135 3.0 10.5 6.8 1.2 185 chr3L 16220469 intergenic not near genes chr3L 16220562 intergenic not near genes chr3L 16220654 intergenic not near genes chr3L_9_16220001 chr3L_16220001 RAL-853_125b 2359 chr3L 16240706 16240779 chr3L 16240888 16240961 11 182 0.0 7.0 3.5 2.4 255 chr3L 16240706 intergenic not near genes chr3L 16240834 intergenic not near genes chr3L 16240961 intergenic not near genes chr3L_11_16240001 chr3L_16240001 RAL-853_125b 2360 chr3L 16281454 16281486 chr3L 16281591 16281599 9 142 9.5 11.5 10.5 0.8 145 chr3L 16281454 exon CG13049 - chr3L 16281526 exon CG13049 - chr3L 16281599 exon CG13049 - chr3L_9_16280001 chr3L_16280001 RAL-853_125b 2361 chr3L 16322774 16322857 chr3L 16322914 16322997 33 139 3.0 10.0 6.5 4.4 223 chr3L 16322774 intergenic not near genes chr3L 16322886 intergenic not near genes chr3L 16322997 intergenic not near genes chr3L_33_16320001 chr3L_16320001 RAL-853_125b 2362 chr3L 16437037 16437068 chr3L 16437173 16437204 9 136 14.0 4.5 9.2 0.9 167 chr3L 16437037 intron,intron CG33158 +,dsx-c73A - chr3L 16437120 intron,intron CG33158 +,dsx-c73A - chr3L 16437204 intron,intron CG33158 +,dsx-c73A - chr3L_9_16435001 chr3L_16435001 RAL-853_125b 2363 chr3L 16443799 16443874 chr3L 16446189 16446224 Doc 27 2388 7.0 8.5 7.8 3.1 2425 chr3L 16443799 intron,intron CG33158 +,dsx-c73A - chr3L 16445012 intron,intron CG33158 +,dsx-c73A - chr3L 16446224 intron,intron CG33158 +,dsx-c73A - chr3L_27_16445001 chr3L_16445001 RAL-853_125b 2364 chr3L 16452986 16453014 chr3L 16453113 16453141 11 127 5.5 0.0 2.8 2.9 155 chr3L 16452986 intron CG33158 + chr3L 16453064 intron CG33158 + chr3L 16453141 intron CG33158 + chr3L_11_16450001 chr3L_16450001 RAL-853_125b 2365 chr3L 16457482 16457553 chr3L 16457628 16457693 17 145 4.0 4.0 4.0 3.4 211 chr3L 16457482 intron CG33158 + chr3L 16457588 intron CG33158 + chr3L 16457693 intron CG33158 + chr3L_17_16455001 chr3L_16455001 RAL-853_125b 2366 chr3L 16493937 16494011 chr3L 16494504 16494546 jockey 37 563 11.0 14.0 12.5 2.7 609 chr3L 16493937 intron,exon,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494242 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494546 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_37_16490001 chr3L_16490001 RAL-853_125b 2367 chr3L 16509351 16509417 chr3L 16509552 16509618 28 201 6.5 9.0 7.8 3.2 267 chr3L 16509351 intron CG43373 - chr3L 16509484 intron CG43373 - chr3L 16509618 intron CG43373 - chr3L_28_16505001 chr3L_16505001 RAL-853_125b 2368 chr3L 16515283 16515310 chr3L 16515417 16515444 12 134 10.0 4.5 7.2 1.5 161 chr3L 16515283 intron CG43373 - chr3L 16515364 intron CG43373 - chr3L 16515444 intron CG43373 - chr3L_12_16515001 chr3L_16515001 RAL-853_125b 2369 chr3L 16515337 16515342 chr3L 16515471 16515476 5 134 4.5 19.0 11.8 0.4 139 chr3L 16515337 intron CG43373 - chr3L 16515406 intron CG43373 - chr3L 16515476 intron CG43373 - chr3L_5_16515001 chr3L_16515001 RAL-853_125b 2370 chr3L 16533515 16533587 chr3L 16533676 16533748 21 161 0.0 4.5 2.2 6.6 233 chr3L 16533515 intron CG43373 - chr3L 16533632 intron CG43373 - chr3L 16533748 intron CG43373 - chr3L_21_16530001 chr3L_16530001 RAL-853_125b 2371 chr3L 16536329 16536379 chr3L 16536450 16536499 23 133 8.0 6.0 7.0 2.9 170 chr3L 16536329 intron CG43373 - chr3L 16536414 intron CG43373 - chr3L 16536499 intron CG43373 - chr3L_23_16535001 chr3L_16535001 RAL-853_125b 2372 chr3L 16610644 16610706 chr3L 16610779 16610841 22 135 7.0 9.5 8.2 2.4 197 chr3L 16610644 intergenic Su(P) -,Prosbeta6 - chr3L 16610742 exon Su(P) - chr3L 16610841 intron Su(P) - chr3L_22_16610001 chr3L_16610001 RAL-853_125b 2373 chr3L 16616466 16616498 chr3L 16621844 16621876 297 7 5376 11.5 6.5 9.0 0.7 5410 chr3L 16616466 3` UTR Abl - chr3L 16619171 3` UTR Abl - chr3L 16621876 3` UTR Abl - chr3L_7_16615001 chr3L_16615001 RAL-853_125b 2374 chr3L 16616499 16616528 chr3L 16621841 16621906 297 8 5373 7.5 6.0 6.8 1.0 5407 chr3L 16616499 3` UTR Abl - chr3L 16619202 3` UTR Abl - chr3L 16621906 3` UTR Abl - chr3L_8_16615001 chr3L_16615001 RAL-853_125b 2375 chr3L 16632192 16632261 chr3L 16632428 16632505 29 234 7.5 4.0 5.8 4.3 313 chr3L 16632192 intron Abl - chr3L 16632348 intron Abl - chr3L 16632505 intron Abl - chr3L_29_16630001 chr3L_16630001 RAL-853_125b 2376 chr3L 16638729 16638787 chr3L 16638859 16638917 19 130 5.0 2.0 3.5 4.2 188 chr3L 16638729 intron Abl - chr3L 16638823 intron Abl - chr3L 16638917 intron Abl - chr3L_19_16635001 chr3L_16635001 RAL-853_125b 2377 chr3L 16683987 16684031 chr3L 16689258 16689302 copia 7 5271 1.0 8.0 4.5 1.3 5315 chr3L 16683987 intron,intron Lasp -,CG43954 - chr3L 16686644 intron,intron Lasp -,CG43954 - chr3L 16689302 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_7_16685001 chr3L_16685001 RAL-853_125b 2378 chr3L 16690143 16690166 chr3L 16690268 16690297 14 126 16.5 20.0 18.2 0.7 154 chr3L 16690143 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L 16690220 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L 16690297 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L_14_16690001 chr3L_16690001 RAL-853_125b 2379 chr3L 16760800 16760873 chr3L 16760990 16761040 17 185 4.5 7.5 6.0 2.4 240 chr3L 16760800 intergenic not near genes chr3L 16760920 intergenic not near genes chr3L 16761040 intergenic not near genes chr3L_17_16760001 chr3L_16760001 RAL-853_125b 2380 chr3L 16807994 16808071 chr3L 16808120 16808200 11 127 6.5 5.5 6.0 1.6 206 chr3L 16807994 intron nudC + chr3L 16808097 intron nudC + chr3L 16808200 intron nudC + chr3L_11_16805001 chr3L_16805001 RAL-853_125b 2381 chr3L 16818700 16818776 chr3L 16818826 16818902 38 126 7.5 6.5 7.0 4.8 202 chr3L 16818700 intron,intron nudC +,CG13024 - chr3L 16818801 intron,intron nudC +,CG13024 - chr3L 16818902 intron,intron nudC +,CG13024 - chr3L_38_16815001 chr3L_16815001 RAL-853_125b 2382 chr3L 16844975 16845040 chr3L 16845138 16845203 20 163 9.5 8.5 9.0 2.0 228 chr3L 16844975 5` UTR CG9669 - chr3L 16845089 intergenic CG9669 -,CG9715 + chr3L 16845203 intergenic CG9715 +,CG9669 - chr3L_20_16845001 chr3L_16845001 RAL-853_125b 2383 chr3L 16860981 16861049 chr3L 16861133 16861201 27 152 7.0 9.5 8.2 2.9 220 chr3L 16860981 intron,exon Rh4 -,CG13029 + chr3L 16861091 intron,intron Rh4 -,CG13029 + chr3L 16861201 intron,exon Rh4 -,CG13029 + chr3L_27_16860001 chr3L_16860001 RAL-853_125b 2384 chr3L 16866171 16866240 chr3L 16866312 16866380 11 140 3.5 5.5 4.5 2.0 209 chr3L 16866171 intron Lmpt + chr3L 16866276 intron Lmpt + chr3L 16866380 intron Lmpt + chr3L_11_16865001 chr3L_16865001 RAL-853_125b 2385 chr3L 16869539 16869603 chr3L 16869672 16869736 24 133 9.5 10.5 10.0 2.2 197 chr3L 16869539 intron Lmpt + chr3L 16869638 intron Lmpt + chr3L 16869736 intron Lmpt + chr3L_24_16865001 chr3L_16865001 RAL-853_125b 2386 chr3L 16876406 16876420 chr3L 16876541 16876555 5 134 12.5 2.5 7.5 0.6 149 chr3L 16876406 intron Lmpt + chr3L 16876480 intron Lmpt + chr3L 16876555 intron Lmpt + chr3L_5_16875001 chr3L_16875001 RAL-853_125b 2387 chr3L 16945685 16945756 chr3L 16954888 16954953 roo 33 9195 6.5 6.0 6.2 4.6 9268 chr3L 16945685 exon Obp73a + chr3L 16950319 intergenic not near genes chr3L 16954953 5` UTR Nc73EF + chr3L_33_16950001 chr3L_16950001 RAL-853_125b 2388 chr3L 16973330 16973346 chr3L 23583083 23583099 4 6609753 5.5 15.0 10.2 0.4 6609769 chr3L 16973330 intron Exn + chr3L 20278214 exon gogo - chr3L 23583099 intron AGO3 + chr3L_4_20275001 chr3L_20275001 RAL-853_125b 2389 chr3L 17026743 17026817 chr3L 17026869 17026948 25 125 14.0 4.5 9.2 2.5 205 chr3L 17026743 exon Fit2 + chr3L 17026846 3` UTR Fit2 + chr3L 17026948 3` UTR Fit2 + chr3L_25_17025001 chr3L_17025001 RAL-853_125b 2390 chr3L 17027157 17027189 chr3L 17027299 17027331 13 142 3.0 10.0 6.5 1.7 174 chr3L 17027157 intergenic Fit2 +,CG7730 + chr3L 17027244 intergenic Fit2 +,CG7730 + chr3L 17027331 intergenic CG7730 +,Fit2 + chr3L_13_17025001 chr3L_17025001 RAL-853_125b 2391 chr3L 17034888 17034943 chr3L 17035121 17035181 G2 5 237 7.0 9.0 8.0 0.6 293 chr3L 17034888 intergenic not near genes chr3L 17035034 intergenic not near genes chr3L 17035181 intergenic beg + chr3L_5_17035001 chr3L_17035001 RAL-853_125b 2392 chr3L 17071847 17071917 chr3L 17071977 17072047 26 128 10.0 9.0 9.5 2.5 200 chr3L 17071847 intron Rbp6 - chr3L 17071947 intron Rbp6 - chr3L 17072047 intron Rbp6 - chr3L_26_17070001 chr3L_17070001 RAL-853_125b 2393 chr3L 17084961 17085024 chr3L 17094160 17094223 roo 29 9199 12.0 7.5 9.8 2.7 9262 chr3L 17084961 intron Rbp6 - chr3L 17089592 intron Rbp6 - chr3L 17094223 intron Rbp6 - chr3L_29_17085001 chr3L_17085001 RAL-853_125b 2394 chr3L 17149124 17149134 chr3L 17149255 17149265 7 131 18.0 0.0 9.0 0.7 141 chr3L 17149124 intron Rbp6 - chr3L 17149194 intron Rbp6 - chr3L 17149265 intron Rbp6 - chr3L_7_17145001 chr3L_17145001 RAL-853_125b 2395 chr3L 17183416 17183473 chr3L 17183543 17183600 7 127 0.5 8.0 4.2 1.3 184 chr3L 17183416 intron Rbp6 - chr3L 17183508 intron Rbp6 - chr3L 17183600 intron Rbp6 - chr3L_7_17180001 chr3L_17180001 RAL-853_125b 2396 chr3L 17272195 17272254 chr3L 17272378 17272437 8 178 11.0 10.0 10.5 0.7 242 chr3L 17272195 intergenic not near genes chr3L 17272316 intergenic not near genes chr3L 17272437 intergenic not near genes chr3L_8_17270001 chr3L_17270001 RAL-853_125b 2397 chr3L 17317048 17317118 chr3L 17317393 17317463 22 341 3.5 6.0 4.8 3.8 415 chr3L 17317048 intergenic not near genes chr3L 17317256 intergenic not near genes chr3L 17317463 intergenic not near genes chr3L_22_17315001 chr3L_17315001 RAL-853_125b 2398 chr3L 17408869 17408926 chr3L 17408995 17409052 19 126 9.0 7.0 8.0 2.1 183 chr3L 17408869 intron blot - chr3L 17408960 intron blot - chr3L 17409052 intron blot - chr3L_19_17405001 chr3L_17405001 RAL-853_125b 2399 chr3L 17461984 17461994 chr3L 17462179 17462189 4 195 6.5 8.5 7.5 0.5 205 chr3L 17461984 intergenic not near genes chr3L 17462086 intergenic not near genes chr3L 17462189 intergenic not near genes chr3L_4_17460001 chr3L_17460001 RAL-853_125b 2400 chr3L 17510693 17510759 chr3L 17510816 17510893 24 130 7.0 9.0 8.0 2.7 200 chr3L 17510693 exon Oatp74D + chr3L 17510793 intron Oatp74D + chr3L 17510893 intron Oatp74D + chr3L_24_17510001 chr3L_17510001 RAL-853_125b 2401 chr3L 17516936 17517003 chr3L 17524539 17524611 412 16 7606 9.5 10.0 9.8 1.5 7675 chr3L 17516936 intron CG7564 + chr3L 17520774 intron CG7564 + chr3L 17524611 3` UTR CG7564 + chr3L_16_17520001 chr3L_17520001 RAL-853_125b 2402 chr3L 17585336 17585350 chr3L 17585612 17585626 6 276 38.5 47.5 43.0 0.1 290 chr3L 17585336 intron Eip74EF - chr3L 17585481 intron Eip74EF - chr3L 17585626 intron Eip74EF - chr3L_6_17585001 chr3L_17585001 RAL-853_125b 2403 chr3L 17585329 17585333 chr3L 17585627 17585671 12 284 35.0 46.0 40.5 0.3 342 chr3L 17585329 intron Eip74EF - chr3L 17585500 intron Eip74EF - chr3L 17585671 intron Eip74EF - chr3L_12_17585001 chr3L_17585001 RAL-853_125b 2404 chr3L 17592738 17592810 chr3L 17592879 17592951 22 141 5.5 7.5 6.5 2.9 213 chr3L 17592738 intron Eip74EF - chr3L 17592844 intron Eip74EF - chr3L 17592951 intron Eip74EF - chr3L_22_17590001 chr3L_17590001 RAL-853_125b 2405 chr3L 17644541 17644611 chr3L 17644667 17644734 26 124 9.0 10.5 9.8 2.4 193 chr3L 17644541 intron Pep - chr3L 17644638 intron Pep - chr3L 17644734 intron Pep - chr3L_26_17640001 chr3L_17640001 RAL-853_125b 2406 chr3L 17659683 17659750 chr3L 17659810 17659877 20 127 6.0 6.0 6.0 2.9 194 chr3L 17659683 intergenic Crtc - chr3L 17659780 intergenic Crtc - chr3L 17659877 3` UTR Crtc - chr3L_20_17655001 chr3L_17655001 RAL-853_125b 2407 chr3L 17675764 17675832 chr3L 17676246 17676287 18 474 8.5 14.5 11.5 1.4 523 chr3L 17675764 intron CG34251 + chr3L 17676026 intron CG34251 + chr3L 17676287 intron CG34251 + chr3L_18_17675001 chr3L_17675001 RAL-853_125b 2408 chr3L 17702323 17702381 chr3L 17702453 17702499 18 131 2.5 6.0 4.2 3.5 176 chr3L 17702323 intron Ccn + chr3L 17702411 intron Ccn + chr3L 17702499 intron Ccn + chr3L_18_17700001 chr3L_17700001 RAL-853_125b 2409 chr3L 17702968 17703008 chr3L 17703106 17703146 6 138 3.0 7.5 5.2 1.0 178 chr3L 17702968 intron Ccn + chr3L 17703057 intron Ccn + chr3L 17703146 intron Ccn + chr3L_6_17700001 chr3L_17700001 RAL-853_125b 2410 chr3L 17730806 17730845 chr3L 17738187 17738226 mdg1 9 7381 16.5 7.5 12.0 0.7 7420 chr3L 17730806 intron Ccn + chr3L 17734516 intron Ccn + chr3L 17738226 intron Ccn + chr3L_9_17730001 chr3L_17730001 RAL-853_125b 2411 chr3L 17743377 17743433 chr3L 17743510 17743554 25 127 17.5 11.5 14.5 1.6 177 chr3L 17743377 intron Ccn + chr3L 17743466 intron Ccn + chr3L 17743554 intron Ccn + chr3L_25_17740001 chr3L_17740001 RAL-853_125b 2412 chr3L 17744945 17744978 chr3L 17745090 17745091 6 137 8.0 0.0 4.0 1.2 146 chr3L 17744945 intron Ccn + chr3L 17745018 intron Ccn + chr3L 17745091 intron Ccn + chr3L_6_17745001 chr3L_17745001 RAL-853_125b 2413 chr3L 17765779 17765831 chr3L 17765911 17765940 19 130 10.5 3.0 6.8 2.4 161 chr3L 17765779 intergenic not near genes chr3L 17765860 intergenic not near genes chr3L 17765940 intergenic not near genes chr3L_19_17765001 chr3L_17765001 RAL-853_125b 2414 chr3L 17773165 17773236 chr3L 17773312 17773367 8 145 19.5 23.0 21.2 0.4 202 chr3L 17773165 intergenic not near genes chr3L 17773266 intergenic not near genes chr3L 17773367 intergenic not near genes chr3L_8_17770001 chr3L_17770001 RAL-853_125b 2415 chr3L 17777990 17778054 chr3L 17778170 17778234 12 180 24.5 21.5 23.0 0.5 244 chr3L 17777990 intergenic not near genes chr3L 17778112 intergenic not near genes chr3L 17778234 intergenic not near genes chr3L_12_17775001 chr3L_17775001 RAL-853_125b 2416 chr3L 17782308 17782364 chr3L 17782634 17782690 7 325 25.0 25.5 25.2 0.3 382 chr3L 17782308 intergenic not near genes chr3L 17782499 intergenic not near genes chr3L 17782690 intergenic not near genes chr3L_7_17780001 chr3L_17780001 RAL-853_125b 2417 chr3L 17790168 17790223 chr3L 17790334 17790390 5 166 21.0 22.5 21.8 0.2 222 chr3L 17790168 intergenic not near genes chr3L 17790279 intergenic not near genes chr3L 17790390 intergenic not near genes chr3L_5_17790001 chr3L_17790001 RAL-853_125b 2418 chr3L 17790579 17790629 chr3L 17790894 17790944 11 314 8.0 11.5 9.8 1.0 365 chr3L 17790579 intergenic CG42815 - chr3L 17790762 intergenic CG42815 - chr3L 17790944 intergenic CG42815 - chr3L_11_17790001 chr3L_17790001 RAL-853_125b 2419 chr3L 17791599 17791673 chr3L 17791739 17791810 20 139 17.5 17.0 17.2 1.1 211 chr3L 17791599 intergenic CG42815 -,CG42816 - chr3L 17791704 intergenic CG42815 -,CG42816 - chr3L 17791810 intergenic CG42816 -,CG42815 - chr3L_20_17790001 chr3L_17790001 RAL-853_125b 2420 chr3L 17799532 17799578 chr3L 17799663 17799709 7 131 20.5 24.0 22.2 0.3 177 chr3L 17799532 exon NUCB1 - chr3L 17799620 intron NUCB1 - chr3L 17799709 intron NUCB1 - chr3L_7_17795001 chr3L_17795001 RAL-853_125b 2421 chr3L 17799768 17799837 chr3L 17801605 17801674 S-element 24 1837 6.0 6.0 6.0 3.4 1906 chr3L 17799768 intron NUCB1 - chr3L 17800721 intron NUCB1 - chr3L 17801674 intron NUCB1 - chr3L_24_17800001 chr3L_17800001 RAL-853_125b 2422 chr3L 17827240 17827306 chr3L 17827381 17827447 6 141 34.0 31.0 32.5 0.2 207 chr3L 17827240 intron Grd + chr3L 17827344 intron Grd + chr3L 17827447 intron Grd + chr3L_6_17825001 chr3L_17825001 RAL-853_125b 2423 chr3L 17834307 17834335 chr3L 17834521 17834549 8 214 9.5 7.5 8.5 0.8 242 chr3L 17834307 intron Grd + chr3L 17834428 intron Grd + chr3L 17834549 intron Grd + chr3L_8_17830001 chr3L_17830001 RAL-853_125b 2424 chr3L 17837578 17837640 chr3L 17837716 17837778 19 137 23.0 24.0 23.5 0.8 200 chr3L 17837578 exon Grd + chr3L 17837678 intron Grd + chr3L 17837778 exon Grd + chr3L_19_17835001 chr3L_17835001 RAL-853_125b 2425 chr3L 17884644 17884656 chr3L 17884794 17884806 6 150 11.0 0.0 5.5 0.9 162 chr3L 17884644 intergenic CG5506 - chr3L 17884725 intergenic CG5506 - chr3L 17884806 intergenic CG5506 - chr3L_6_17880001 chr3L_17880001 RAL-853_125b 2426 chr3L 17884664 17884707 chr3L 17884814 17884856 9 150 4.5 0.0 2.2 2.8 192 chr3L 17884664 intergenic CG5506 - chr3L 17884760 intergenic CG5506 - chr3L 17884856 intergenic CG5506 - chr3L_9_17880001 chr3L_17880001 RAL-853_125b 2427 chr3L 17887826 17887865 chr3L 17887962 17888000 4 135 17.5 14.5 16.0 0.2 174 chr3L 17887826 intron CG7402 + chr3L 17887913 intron CG7402 + chr3L 17888000 intron CG7402 + chr3L_4_17885001 chr3L_17885001 RAL-853_125b 2428 chr3L 17906542 17906596 chr3L 17906693 17906747 9 150 14.0 9.5 11.8 0.7 205 chr3L 17906542 intron Prestin - chr3L 17906644 intron Prestin - chr3L 17906747 intron Prestin - chr3L_9_17905001 chr3L_17905001 RAL-853_125b 2429 chr3L 17917602 17917636 chr3L 17917942 17917966 7 337 19.0 29.0 24.0 0.3 364 chr3L 17917602 intergenic not near genes chr3L 17917784 intergenic not near genes chr3L 17917966 intergenic not near genes chr3L_7_17915001 chr3L_17915001 RAL-853_125b 2430 chr3L 17918336 17918393 chr3L 17921189 17921247 opus 11 2853 9.0 6.5 7.8 1.2 2911 chr3L 17918336 intergenic not near genes chr3L 17919792 intergenic not near genes chr3L 17921247 intergenic not near genes chr3L_11_17915001 chr3L_17915001 RAL-853_125b 2431 chr3L 17921831 17921881 chr3L 17921968 17922018 6 137 12.5 14.0 13.2 0.4 187 chr3L 17921831 intergenic not near genes chr3L 17921924 intergenic not near genes chr3L 17922018 intergenic not near genes chr3L_6_17920001 chr3L_17920001 RAL-853_125b 2432 chr3L 17983486 17983546 chr3L 17983635 17983695 7 149 26.5 25.5 26.0 0.3 209 chr3L 17983486 intron Eip75B - chr3L 17983590 intron Eip75B - chr3L 17983695 intron Eip75B - chr3L_7_17980001 chr3L_17980001 RAL-853_125b 2433 chr3L 17991529 17991571 chr3L 17991657 17991699 19 128 6.5 8.5 7.5 2.2 170 chr3L 17991529 intron Eip75B - chr3L 17991614 intron Eip75B - chr3L 17991699 intron Eip75B - chr3L_19_17990001 chr3L_17990001 RAL-853_125b 2434 chr3L 18000632 18000700 chr3L 18000759 18000827 18 127 27.5 19.0 23.2 0.7 195 chr3L 18000632 intron Eip75B - chr3L 18000730 intron Eip75B - chr3L 18000827 intron Eip75B - chr3L_18_18000001 chr3L_18000001 RAL-853_125b 2435 chr3L 18011873 18011945 chr3L 18012238 18012310 25 365 15.0 14.5 14.8 1.6 437 chr3L 18011873 intron Eip75B - chr3L 18012092 intron Eip75B - chr3L 18012310 intron Eip75B - chr3L_25_18010001 chr3L_18010001 RAL-853_125b 2436 chr3L 18020514 18020576 chr3L 18020670 18020732 17 156 8.0 3.0 5.5 2.6 218 chr3L 18020514 intron Eip75B - chr3L 18020623 intron Eip75B - chr3L 18020732 intron Eip75B - chr3L_17_18020001 chr3L_18020001 RAL-853_125b 2437 chr3L 18021314 18021379 chr3L 18021456 18021521 8 138 29.5 27.5 28.5 0.3 207 chr3L 18021314 intron Eip75B - chr3L 18021418 intron Eip75B - chr3L 18021521 intron Eip75B - chr3L_8_18020001 chr3L_18020001 RAL-853_125b 2438 chr3L 18029910 18029938 chr3L 18030037 18030065 6 127 23.0 15.0 19.0 0.3 155 chr3L 18029910 intron Eip75B - chr3L 18029988 intron Eip75B - chr3L 18030065 intron Eip75B - chr3L_6_18025001 chr3L_18025001 RAL-853_125b 2439 chr3L 18042211 18042270 chr3L 18042339 18042398 9 126 28.5 22.5 25.5 0.3 187 chr3L 18042211 intron Eip75B - chr3L 18042304 intron Eip75B - chr3L 18042398 intron Eip75B - chr3L_9_18040001 chr3L_18040001 RAL-853_125b 2440 chr3L 18047665 18047731 chr3L 18056772 18056838 roo 17 9107 6.0 4.5 5.2 2.7 9173 chr3L 18047665 intron Eip75B - chr3L 18052252 intron Eip75B - chr3L 18056838 intron Eip75B - chr3L_17_18050001 chr3L_18050001 RAL-853_125b 2441 chr3L 18056766 18056831 chr3L 18056895 18056960 16 127 8.0 20.0 14.0 1.1 194 chr3L 18056766 intron Eip75B - chr3L 18056863 intron Eip75B - chr3L 18056960 intron Eip75B - chr3L_16_18055001 chr3L_18055001 RAL-853_125b 2442 chr3L 18057928 18058007 chr3L 18058079 18058158 8 150 25.0 27.5 26.2 0.3 230 chr3L 18057928 intron Eip75B - chr3L 18058043 intron Eip75B - chr3L 18058158 intron Eip75B - chr3L_8_18055001 chr3L_18055001 RAL-853_125b 2443 chr3L 18064010 18064069 chr3L 18064147 18064206 16 137 14.0 11.0 12.5 1.2 196 chr3L 18064010 intron Eip75B - chr3L 18064108 intron Eip75B - chr3L 18064206 intron Eip75B - chr3L_16_18060001 chr3L_18060001 RAL-853_125b 2444 chr3L 18092732 18092761 chr3L 18092897 18092926 5 165 24.5 5.0 14.8 0.3 194 chr3L 18092732 intron CG13698 - chr3L 18092829 intron CG13698 - chr3L 18092926 intron CG13698 - chr3L_5_18090001 chr3L_18090001 RAL-853_125b 2445 chr3L 18107573 18107639 chr3L 18107716 18107782 18 143 13.5 15.5 14.5 1.2 209 chr3L 18107573 intergenic mRpS26 +,CG5147 - chr3L 18107678 intergenic CG5147 -,mRpS26 + chr3L 18107782 intergenic CG5147 -,mRpS26 + chr3L_18_18105001 chr3L_18105001 RAL-853_125b 2446 chr3L 18118196 18118233 chr3L 18118324 18118361 8 128 17.0 14.0 15.5 0.5 165 chr3L 18118196 3` UTR,intron CG32195 +,CG7341 + chr3L 18118278 3` UTR,intron CG32195 +,CG7341 + chr3L 18118361 3` UTR,intron CG32195 +,CG7341 + chr3L_8_18115001 chr3L_18115001 RAL-853_125b 2447 chr3L 18119594 18119667 chr3L 18119756 18119815 14 158 0.0 11.5 5.8 2.1 221 chr3L 18119594 intron CG7341 + chr3L 18119704 intron CG7341 + chr3L 18119815 5` UTR CG7341 + chr3L_14_18115001 chr3L_18115001 RAL-853_125b 2448 chr3L 18135706 18135757 chr3L 18135836 18135887 5 130 8.5 8.0 8.2 0.5 181 chr3L 18135706 intergenic CR44669 - chr3L 18135796 3` UTR CR44669 - chr3L 18135887 3` UTR CR44669 - chr3L_5_18135001 chr3L_18135001 RAL-853_125b 2449 chr3L 18150354 18150414 chr3L 18150505 18150578 11 153 16.0 8.5 12.2 0.8 224 chr3L 18150354 intron CG7330 + chr3L 18150466 intron CG7330 + chr3L 18150578 intron CG7330 + chr3L_11_18150001 chr3L_18150001 RAL-853_125b 2450 chr3L 18154032 18154089 chr3L 18154166 18154217 4 132 17.0 17.0 17.0 0.2 185 chr3L 18154032 intergenic CG7330 + chr3L 18154124 intergenic CG7330 + chr3L 18154217 intergenic CG7330 + chr3L_4_18150001 chr3L_18150001 RAL-853_125b 2451 chr3L 18172640 18172683 chr3L 18172766 18172809 10 126 18.5 1.0 9.8 0.9 169 chr3L 18172640 intron W - chr3L 18172724 intron W - chr3L 18172809 intron W - chr3L_10_18170001 chr3L_18170001 RAL-853_125b 2452 chr3L 18180937 18180981 chr3L 18181070 18181118 9 133 9.5 11.5 10.5 0.8 181 chr3L 18180937 intron W - chr3L 18181028 intron W - chr3L 18181118 intron W - chr3L_9_18180001 chr3L_18180001 RAL-853_125b 2453 chr3L 18186586 18186611 chr3L 18186775 18186800 5 189 20.5 24.5 22.5 0.2 214 chr3L 18186586 intergenic not near genes chr3L 18186693 intergenic not near genes chr3L 18186800 intergenic not near genes chr3L_5_18185001 chr3L_18185001 RAL-853_125b 2454 chr3L 18189551 18189584 chr3L 18190202 18190219 S-element 6 643 26.5 16.0 21.2 0.3 668 chr3L 18189551 intergenic not near genes chr3L 18189885 intergenic not near genes chr3L 18190219 intergenic not near genes chr3L_6_18185001 chr3L_18185001 RAL-853_125b 2455 chr3L 18210694 18210743 chr3L 18210820 18210869 9 126 17.0 16.0 16.5 0.5 175 chr3L 18210694 intergenic not near genes chr3L 18210782 intergenic not near genes chr3L 18210869 intergenic not near genes chr3L_9_18210001 chr3L_18210001 RAL-853_125b 2456 chr3L 18221051 18221129 chr3L 18221193 18221249 5 132 16.5 20.0 18.2 0.3 198 chr3L 18221051 intergenic not near genes chr3L 18221150 intergenic not near genes chr3L 18221249 intergenic not near genes chr3L_5_18220001 chr3L_18220001 RAL-853_125b 2457 chr3L 18223113 18223188 chr3L 18223246 18223307 14 140 3.0 0.0 1.5 5.6 194 chr3L 18223113 intergenic not near genes chr3L 18223210 intergenic not near genes chr3L 18223307 intergenic not near genes chr3L_14_18220001 chr3L_18220001 RAL-853_125b 2458 chr3L 18236165 18236200 chr3L 18236769 18236790 11 602 24.5 11.0 17.8 0.6 625 chr3L 18236165 intergenic not near genes chr3L 18236478 intergenic not near genes chr3L 18236790 intergenic not near genes chr3L_11_18235001 chr3L_18235001 RAL-853_125b 2459 chr3L 18251713 18251779 chr3L 18251856 18251922 8 143 18.5 18.0 18.2 0.4 209 chr3L 18251713 intergenic CheA75a + chr3L 18251818 intergenic CheA75a + chr3L 18251922 intergenic CheA75a + chr3L_8_18250001 chr3L_18250001 RAL-853_125b 2460 chr3L 18262422 18262487 chr3L 18262555 18262621 10 132 9.5 12.5 11.0 0.8 199 chr3L 18262422 intergenic not near genes chr3L 18262522 intergenic not near genes chr3L 18262621 intergenic not near genes chr3L_10_18260001 chr3L_18260001 RAL-853_125b 2461 chr3L 18301308 18301380 chr3L 18301446 18301519 12 139 8.0 15.0 11.5 1.0 211 chr3L 18301308 intergenic CG13700 - chr3L 18301414 intergenic CG13700 - chr3L 18301519 intergenic CG13700 - chr3L_12_18300001 chr3L_18300001 RAL-853_125b 2462 chr3L 18323900 18323971 chr3L 18324039 18324110 24 130 16.5 12.5 14.5 1.5 210 chr3L 18323900 intergenic not near genes chr3L 18324005 intergenic not near genes chr3L 18324110 intergenic not near genes chr3L_24_18320001 chr3L_18320001 RAL-853_125b 2463 chr3L 18408681 18408755 chr3L 18408817 18408891 14 136 8.5 5.0 6.8 1.8 210 chr3L 18408681 intergenic not near genes chr3L 18408786 intergenic not near genes chr3L 18408891 intergenic not near genes chr3L_14_18405001 chr3L_18405001 RAL-853_125b 2464 chr3L 18438253 18438310 chr3L 18438379 18438436 12 126 15.0 12.5 13.8 0.8 183 chr3L 18438253 intergenic skl - chr3L 18438344 intergenic skl - chr3L 18438436 intergenic skl - chr3L_12_18435001 chr3L_18435001 RAL-853_125b 2465 chr3L 18448574 18448610 chr3L 18448716 18448752 15 142 13.0 3.0 8.0 1.7 178 chr3L 18448574 intergenic not near genes chr3L 18448663 intergenic not near genes chr3L 18448752 intergenic not near genes chr3L_15_18445001 chr3L_18445001 RAL-853_125b 2466 chr3L 18456228 18456301 chr3L 18456366 18456439 10 136 10.5 11.5 11.0 0.8 211 chr3L 18456228 intergenic CR44670 - chr3L 18456334 intergenic CR44670 - chr3L 18456439 3` UTR CR44670 - chr3L_10_18455001 chr3L_18455001 RAL-853_125b 2467 chr3L 18464446 18464453 chr3L 18464577 18464589 6 135 18.0 13.0 15.5 0.4 143 chr3L 18464446 intergenic not near genes chr3L 18464518 intergenic not near genes chr3L 18464589 intergenic not near genes chr3L_6_18460001 chr3L_18460001 RAL-853_125b 2468 chr3L 18464454 18464506 chr3L 18464574 18464642 14 127 6.0 12.0 9.0 1.4 188 chr3L 18464454 intergenic not near genes chr3L 18464548 intergenic not near genes chr3L 18464642 intergenic not near genes chr3L_14_18460001 chr3L_18460001 RAL-853_125b 2469 chr3L 18484678 18484732 chr3L 18488597 18488660 17 3923 55.0 67.0 61.0 0.3 3982 chr3L 18484678 intergenic AstC-R2 - chr3L 18486669 3` UTR AstC-R2 - chr3L 18488660 exon AstC-R2 - chr3L_17_18485001 chr3L_18485001 RAL-853_125b 2470 chr3L 18484677 18484705 chr3L 18488662 18488665 5 3958 51.0 58.0 54.5 0.1 3988 chr3L 18484677 intergenic AstC-R2 - chr3L 18486671 3` UTR AstC-R2 - chr3L 18488665 exon AstC-R2 - chr3L_5_18485001 chr3L_18485001 RAL-853_125b 2471 chr3L 18506104 18506152 chr3L 18509608 18509649 F-element 21 3511 4.5 7.5 6.0 3.0 3545 chr3L 18506104 intergenic not near genes chr3L 18507876 intergenic not near genes chr3L 18509649 intergenic not near genes chr3L_21_18505001 chr3L_18505001 RAL-853_125b 2472 chr3L 18528592 18528651 chr3L 18537803 18537862 roo 17 9211 7.5 3.0 5.2 2.7 9270 chr3L 18528592 intergenic not near genes chr3L 18533227 intergenic not near genes chr3L 18537862 intergenic not near genes chr3L_17_18530001 chr3L_18530001 RAL-853_125b 2473 chr3L 18566975 18567046 chr3L 18567111 18567182 10 136 23.5 19.0 21.2 0.5 207 chr3L 18566975 intron AstC-R1 + chr3L 18567078 intron AstC-R1 + chr3L 18567182 intron AstC-R1 + chr3L_10_18565001 chr3L_18565001 RAL-853_125b 2474 chr3L 18573241 18573253 chr3L 18573392 18573393 7 149 8.0 9.5 8.8 0.7 152 chr3L 18573241 intron AstC-R1 + chr3L 18573317 intron AstC-R1 + chr3L 18573393 intron AstC-R1 + chr3L_7_18570001 chr3L_18570001 RAL-853_125b 2475 chr3L 18579525 18579587 chr3L 18579703 18579765 8 178 22.5 25.0 23.8 0.3 240 chr3L 18579525 intergenic not near genes chr3L 18579645 intergenic not near genes chr3L 18579765 intergenic not near genes chr3L_8_18575001 chr3L_18575001 RAL-853_125b 2476 chr3L 18593908 18593980 chr3L 18595938 18596013 Doc 15 2031 5.0 1.0 3.0 3.8 2105 chr3L 18593908 intergenic term - chr3L 18594960 intergenic not near genes chr3L 18596013 intergenic CR45389 + chr3L_15_18590001 chr3L_18590001 RAL-853_125b 2477 chr3L 18606705 18606777 chr3L 18606953 18607025 9 248 25.5 27.5 26.5 0.3 320 chr3L 18606705 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18606865 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18607025 intron,intron,intron CG13380 -,CG4174 -,CG18233 + chr3L_9_18605001 chr3L_18605001 RAL-853_125b 2478 chr3L 18638555 18638597 chr3L 18638699 18638741 15 144 8.0 8.5 8.2 1.6 186 chr3L 18638555 intron MYPT-75D + chr3L 18638648 intron MYPT-75D + chr3L 18638741 intron MYPT-75D + chr3L_15_18635001 chr3L_18635001 RAL-853_125b 2479 chr3L 18656145 18656162 chr3L 18656280 18656297 5 131 29.0 18.5 23.8 0.2 152 chr3L 18656145 intron MYPT-75D + chr3L 18656221 intron MYPT-75D + chr3L 18656297 intron MYPT-75D + chr3L_5_18655001 chr3L_18655001 RAL-853_125b 2480 chr3L 18656163 18656211 chr3L 18656277 18656296 12 125 20.0 18.0 19.0 0.6 133 chr3L 18656163 intron MYPT-75D + chr3L 18656230 intron MYPT-75D + chr3L 18656296 intron MYPT-75D + chr3L_12_18655001 chr3L_18655001 RAL-853_125b 2481 chr3L 18665173 18665229 chr3L 18665308 18665365 14 136 22.5 17.0 19.8 0.7 192 chr3L 18665173 intron MYPT-75D + chr3L 18665269 intron MYPT-75D + chr3L 18665365 intron MYPT-75D + chr3L_14_18665001 chr3L_18665001 RAL-853_125b 2482 chr3L 18677897 18677909 chr3L 18677982 18678054 6 135 11.5 11.5 11.5 0.5 157 chr3L 18677897 intergenic GNBP1 + chr3L 18677976 intergenic GNBP1 + chr3L 18678054 intergenic GNBP1 + chr3L_6_18675001 chr3L_18675001 RAL-853_125b 2483 chr3L 18682649 18682715 chr3L 18682799 18682865 15 151 51.5 48.0 49.8 0.3 216 chr3L 18682649 exon CG32202 + chr3L 18682757 exon CG32202 + chr3L 18682865 intergenic CG32202 +,Chmp1 - chr3L_15_18680001 chr3L_18680001 RAL-853_125b 2484 chr3L 18688121 18688151 chr3L 18688267 18688302 6 149 20.5 24.0 22.2 0.3 181 chr3L 18688121 intergenic not near genes chr3L 18688212 intergenic not near genes chr3L 18688302 intergenic not near genes chr3L_6_18685001 chr3L_18685001 RAL-853_125b 2485 chr3L 18710747 18710786 chr3L 18718747 18718786 Stalker2 9 8000 7.0 3.5 5.2 1.5 8039 chr3L 18710747 intergenic not near genes chr3L 18714766 intergenic not near genes chr3L 18718786 intergenic not near genes chr3L_9_18710001 chr3L_18710001 RAL-853_125b 2486 chr3L 18721731 18721794 chr3L 18721863 18721935 17 140 10.5 8.0 9.2 1.7 204 chr3L 18721731 intergenic CG12477 - chr3L 18721833 intergenic CG12477 - chr3L 18721935 3` UTR CG12477 - chr3L_17_18720001 chr3L_18720001 RAL-853_125b 2487 chr3L 18736006 18736045 chr3L 18736151 18736190 12 145 14.0 16.5 15.2 0.7 184 chr3L 18736006 intergenic not near genes chr3L 18736098 intergenic not near genes chr3L 18736190 intergenic not near genes chr3L_12_18735001 chr3L_18735001 RAL-853_125b 2488 chr3L 18753501 18753553 chr3L 18753633 18753685 13 132 6.0 9.5 7.8 1.5 184 chr3L 18753501 intron ftz-f1 - chr3L 18753593 intron ftz-f1 - chr3L 18753685 intron ftz-f1 - chr3L_13_18750001 chr3L_18750001 RAL-853_125b 2489 chr3L 18770615 18770663 chr3L 18770750 18770798 5 135 19.0 18.0 18.5 0.3 183 chr3L 18770615 intron ftz-f1 - chr3L 18770706 intron ftz-f1 - chr3L 18770798 intron ftz-f1 - chr3L_5_18770001 chr3L_18770001 RAL-853_125b 2490 chr3L 18772374 18772428 chr3L 18781098 18781159 roo 26 8731 12.5 8.0 10.2 2.3 8785 chr3L 18772374 intron ftz-f1 - chr3L 18776766 intron ftz-f1 - chr3L 18781159 intron ftz-f1 - chr3L_26_18775001 chr3L_18775001 RAL-853_125b 2491 chr3L 18784348 18784401 chr3L 18784487 18784540 12 139 5.5 5.5 5.5 1.8 192 chr3L 18784348 intron ftz-f1 - chr3L 18784444 intron ftz-f1 - chr3L 18784540 intron ftz-f1 - chr3L_12_18780001 chr3L_18780001 RAL-853_125b 2492 chr3L 18797280 18797334 chr3L 18797414 18797468 6 134 20.5 26.5 23.5 0.2 188 chr3L 18797280 intron ftz-f1 - chr3L 18797374 intron ftz-f1 - chr3L 18797468 intron ftz-f1 - chr3L_6_18795001 chr3L_18795001 RAL-853_125b 2493 chr3L 18810101 18810178 chr3L 18810228 18810310 23 128 8.0 9.5 8.8 2.3 209 chr3L 18810101 intron CG14073 - chr3L 18810206 intron CG14073 - chr3L 18810310 intron CG14073 - chr3L_23_18810001 chr3L_18810001 RAL-853_125b 2494 chr3L 18831641 18831713 chr3L 18831845 18831917 10 204 8.0 12.0 10.0 0.9 276 chr3L 18831641 intron Indy - chr3L 18831779 intron Indy - chr3L 18831917 intron Indy - chr3L_10_18830001 chr3L_18830001 RAL-853_125b 2495 chr3L 18843828 18843898 chr3L 18843967 18844038 33 145 3.0 10.0 6.5 4.4 210 chr3L 18843828 intron Indy - chr3L 18843933 intron Indy - chr3L 18844038 intron Indy - chr3L_33_18840001 chr3L_18840001 RAL-853_125b 2496 chr3L 18868925 18868994 chr3L 18869056 18869131 14 138 2.5 2.5 2.5 4.0 206 chr3L 18868925 3` UTR Dysb + chr3L 18869028 3` UTR Dysb + chr3L 18869131 3` UTR Dysb + chr3L_14_18865001 chr3L_18865001 RAL-853_125b 2497 chr3L 18885958 18885996 chr3L 18886084 18886122 5 126 16.5 20.0 18.2 0.3 164 chr3L 18885958 intron CG3961 - chr3L 18886040 intron CG3961 - chr3L 18886122 intron CG3961 - chr3L_5_18885001 chr3L_18885001 RAL-853_125b 2498 chr3L 18887257 18887294 chr3L 18887413 18887450 5 156 17.0 20.5 18.8 0.3 193 chr3L 18887257 intron CG3961 - chr3L 18887354 intron CG3961 - chr3L 18887450 intron CG3961 - chr3L_5_18885001 chr3L_18885001 RAL-853_125b 2499 chr3L 18888215 18888285 chr3L 18888350 18888420 9 135 23.0 24.5 23.8 0.4 205 chr3L 18888215 intron CG3961 - chr3L 18888318 intron CG3961 - chr3L 18888420 intron CG3961 - chr3L_9_18885001 chr3L_18885001 RAL-853_125b 2500 chr3L 18896761 18896787 chr3L 18896930 18896931 6 173 3.0 8.0 5.5 0.9 170 chr3L 18896761 intron CG3902 - chr3L 18896846 intron CG3902 - chr3L 18896931 intron CG3902 - chr3L_6_18895001 chr3L_18895001 RAL-853_125b 2501 chr3L 18916443 18916521 chr3L 18916599 18916657 30 154 16.5 17.0 16.8 1.7 214 chr3L 18916443 intergenic not near genes chr3L 18916550 intergenic not near genes chr3L 18916657 intergenic not near genes chr3L_30_18915001 chr3L_18915001 RAL-853_125b 2502 chr3L 18924438 18924499 chr3L 18924564 18924625 6 121 20.5 18.0 19.2 0.3 187 chr3L 18924438 intron CG32204 - chr3L 18924532 intron CG32204 - chr3L 18924625 intron CG32204 - chr3L_6_18920001 chr3L_18920001 RAL-853_125b 2503 chr3L 18933583 18933659 chr3L 18933727 18933802 22 143 5.0 10.0 7.5 2.6 219 chr3L 18933583 intron CG32204 - chr3L 18933692 intron CG32204 - chr3L 18933802 intron CG32204 - chr3L_22_18930001 chr3L_18930001 RAL-853_125b 2504 chr3L 18935707 18935771 chr3L 18936072 18936135 15 365 15.5 12.0 13.8 1.0 428 chr3L 18935707 intron CG32204 - chr3L 18935921 intron CG32204 - chr3L 18936135 intron CG32204 - chr3L_15_18935001 chr3L_18935001 RAL-853_125b 2505 chr3L 18935792 18935865 chr3L 18935931 18936004 14 139 2.5 2.0 2.2 4.4 212 chr3L 18935792 intron CG32204 - chr3L 18935898 intron CG32204 - chr3L 18936004 intron CG32204 - chr3L_14_18935001 chr3L_18935001 RAL-853_125b 2506 chr3L 18942829 18942870 chr3L 18942992 18942992 6 154 24.0 28.5 26.2 0.2 163 chr3L 18942829 intron CG32204 - chr3L 18942910 intron CG32204 - chr3L 18942992 intron CG32204 - chr3L_6_18940001 chr3L_18940001 RAL-853_125b 2507 chr3L 18950979 18951050 chr3L 18951106 18951177 19 127 20.5 22.0 21.2 0.9 198 chr3L 18950979 intron CG6836 + chr3L 18951078 intron CG6836 + chr3L 18951177 intron CG6836 + chr3L_19_18950001 chr3L_18950001 RAL-853_125b 2508 chr3L 19008795 19008867 chr3L 19009186 19009255 jockey 19 383 5.5 6.5 6.0 2.7 460 chr3L 19008795 intron nkd - chr3L 19009025 intron nkd - chr3L 19009255 intron nkd - chr3L_19_19005001 chr3L_19005001 RAL-853_125b 2509 chr3L 19015127 19015212 chr3L 19015261 19015342 16 133 4.0 2.5 3.2 3.8 215 chr3L 19015127 intron nkd - chr3L 19015234 intron nkd - chr3L 19015342 intron nkd - chr3L_16_19015001 chr3L_19015001 RAL-853_125b 2510 chr3L 19029405 19029470 chr3L 19029557 19029622 6 152 24.5 16.5 20.5 0.3 217 chr3L 19029405 intron nkd - chr3L 19029514 intron nkd - chr3L 19029622 intron nkd - chr3L_6_19025001 chr3L_19025001 RAL-853_125b 2511 chr3L 19082004 19082062 chr3L 19082150 19082214 14 152 26.5 21.0 23.8 0.6 210 chr3L 19082004 intron Mkp3 - chr3L 19082109 intron Mkp3 - chr3L 19082214 intron Mkp3 - chr3L_14_19080001 chr3L_19080001 RAL-853_125b 2512 chr3L 19101687 19101738 chr3L 19102109 19102160 8 422 18.0 25.5 21.8 0.4 473 chr3L 19101687 intergenic not near genes chr3L 19101924 intergenic not near genes chr3L 19102160 intergenic not near genes chr3L_8_19100001 chr3L_19100001 RAL-853_125b 2513 chr3L 19111319 19111363 chr3L 19111456 19111483 13 135 14.0 17.5 15.8 0.8 164 chr3L 19111319 intron CG14082 - chr3L 19111401 intron CG14082 - chr3L 19111483 intron CG14082 - chr3L_13_19110001 chr3L_19110001 RAL-853_125b 2514 chr3L 19115599 19115662 chr3L 19115827 19115890 BS 16 227 11.0 11.0 11.0 1.3 291 chr3L 19115599 intron CG14082 - chr3L 19115744 intron CG14082 - chr3L 19115890 intron CG14082 - chr3L_16_19115001 chr3L_19115001 RAL-853_125b 2515 chr3L 19116995 19117072 chr3L 19124492 19124529 mdg1 34 7494 8.5 3.5 6.0 4.9 7534 chr3L 19116995 intron CG14082 - chr3L 19120762 intron CG14082 - chr3L 19124529 intron CG14082 - chr3L_34_19120001 chr3L_19120001 RAL-853_125b 2516 chr3L 19135047 19135113 chr3L 19135249 19135315 17 202 16.5 19.0 17.8 0.9 268 chr3L 19135047 intron CG14082 - chr3L 19135181 intron CG14082 - chr3L 19135315 intron CG14082 - chr3L_17_19135001 chr3L_19135001 RAL-853_125b 2517 chr3L 19138105 19138157 chr3L 19138237 19138301 8 135 10.0 14.5 12.2 0.6 196 chr3L 19138105 intron CG14082 - chr3L 19138203 intron CG14082 - chr3L 19138301 intron CG14082 - chr3L_8_19135001 chr3L_19135001 RAL-853_125b 2518 chr3L 19138527 19138584 chr3L 19138656 19138697 10 128 26.5 30.0 28.2 0.3 170 chr3L 19138527 intron CG14082 - chr3L 19138612 intron CG14082 - chr3L 19138697 intron CG14082 - chr3L_10_19135001 chr3L_19135001 RAL-853_125b 2519 chr3L 19182342 19182412 chr3L 19182473 19182543 11 129 23.0 17.5 20.2 0.5 201 chr3L 19182342 intron fz2 - chr3L 19182442 intron fz2 - chr3L 19182543 intron fz2 - chr3L_11_19180001 chr3L_19180001 RAL-853_125b 2520 chr3L 19208012 19208088 chr3L 19209436 19209512 Doc 30 1422 6.0 3.5 4.8 5.2 1500 chr3L 19208012 intron fz2 - chr3L 19208762 intron fz2 - chr3L 19209512 intron fz2 - chr3L_30_19205001 chr3L_19205001 RAL-853_125b 2521 chr3L 19210064 19210137 chr3L 19210210 19210283 7 146 7.0 10.5 8.8 0.7 219 chr3L 19210064 intron fz2 - chr3L 19210174 intron fz2 - chr3L 19210283 intron fz2 - chr3L_7_19210001 chr3L_19210001 RAL-853_125b 2522 chr3L 19220633 19220633 chr3L 22908066 22908067 26 3687433 45.5 42.5 44.0 0.6 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_26_21060001 chr3L_21060001 RAL-853_125b 2523 chr3L 19220634 19220634 chr3L 22908066 22908067 8 3687432 45.5 42.5 44.0 0.2 3687433 chr3L 19220634 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_8_21060001 chr3L_21060001 RAL-853_125b 2524 chr3L 19220635 19220635 chr3L 22908066 22908067 7 3687431 46.0 42.5 44.2 0.2 3687432 chr3L 19220635 intron fz2 - chr3L 21064351 intron siz + chr3L 22908067 intergenic not near genes chr3L_7_21060001 chr3L_21060001 RAL-853_125b 2525 chr3L 19220636 19220637 chr3L 22908066 22908066 26 3687429 45.5 42.5 44.0 0.6 3687430 chr3L 19220636 intron fz2 - chr3L 21064351 intron siz + chr3L 22908066 intergenic not near genes chr3L_26_21060001 chr3L_21060001 RAL-853_125b 2526 chr3L 19238686 19238745 chr3L 19238843 19238902 7 157 23.0 21.0 22.0 0.3 216 chr3L 19238686 intergenic not near genes chr3L 19238794 intergenic not near genes chr3L 19238902 intergenic not near genes chr3L_7_19235001 chr3L_19235001 RAL-853_125b 2527 chr3L 19244066 19244138 chr3L 19244194 19244266 9 123 27.5 30.5 29.0 0.3 200 chr3L 19244066 intergenic not near genes chr3L 19244166 intergenic not near genes chr3L 19244266 intergenic not near genes chr3L_9_19240001 chr3L_19240001 RAL-853_125b 2528 chr3L 19248809 19248868 chr3L 19248949 19249009 14 140 12.5 12.5 12.5 1.0 200 chr3L 19248809 intergenic not near genes chr3L 19248909 intergenic not near genes chr3L 19249009 intergenic not near genes chr3L_14_19245001 chr3L_19245001 RAL-853_125b 2529 chr3L 19269787 19269836 chr3L 19270041 19270090 10 248 25.5 31.0 28.2 0.3 303 chr3L 19269787 intron,exon CG14085 +,CG14088 - chr3L 19269938 intron,exon CG14085 +,CG14088 - chr3L 19270090 intron,exon CG14085 +,CG14088 - chr3L_10_19265001 chr3L_19265001 RAL-853_125b 2530 chr3L 19279648 19279701 chr3L 19279790 19279843 7 136 29.5 35.0 32.2 0.2 195 chr3L 19279648 intron CG14086 + chr3L 19279746 exon CG14086 + chr3L 19279843 3` UTR CG14086 + chr3L_7_19275001 chr3L_19275001 RAL-853_125b 2531 chr3L 19319591 19319634 chr3L 19319718 19319760 4 126 5.5 5.0 5.2 0.6 169 chr3L 19319591 intron pip - chr3L 19319676 intron pip - chr3L 19319760 intron pip - chr3L_4_19315001 chr3L_19315001 RAL-853_125b 2532 chr3L 19342714 19342772 chr3L 19342855 19342913 27 141 5.0 4.5 4.8 4.7 199 chr3L 19342714 3` UTR CG32206 - chr3L 19342814 3` UTR CG32206 - chr3L 19342913 3` UTR CG32206 - chr3L_27_19340001 chr3L_19340001 RAL-853_125b 2533 chr3L 19346818 19346873 chr3L 19346953 19346979 8 130 10.5 17.5 14.0 0.5 161 chr3L 19346818 intron CG32206 - chr3L 19346898 intron CG32206 - chr3L 19346979 intron CG32206 - chr3L_8_19345001 chr3L_19345001 RAL-853_125b 2534 chr3L 19387567 19387621 chr3L 19387960 19388014 5 393 22.0 19.0 20.5 0.2 447 chr3L 19387567 intron CG32206 - chr3L 19387790 intron,intron CG32206 -,ms(3)76Ba + chr3L 19388014 intron,exon CG32206 -,ms(3)76Ba + chr3L_5_19385001 chr3L_19385001 RAL-853_125b 2535 chr3L 19398898 19398902 chr3L 19403665 19403669 F-element 4 4767 15.0 8.0 11.5 0.3 4771 chr3L 19398898 intron CG32206 - chr3L 19401284 intron CG32206 - chr3L 19403669 intron CG32206 - chr3L_4_19400001 chr3L_19400001 RAL-853_125b 2536 chr3L 19398903 19398931 chr3L 19403655 19403698 F-element 14 4766 9.0 7.0 8.0 1.6 4795 chr3L 19398903 intron CG32206 - chr3L 19401300 intron CG32206 - chr3L 19403698 intron CG32206 - chr3L_14_19400001 chr3L_19400001 RAL-853_125b 2537 chr3L 19404938 19404999 chr3L 19405060 19405126 8 126 24.5 23.5 24.0 0.3 188 chr3L 19404938 intron CG32206 - chr3L 19405032 intron CG32206 - chr3L 19405126 intron CG32206 - chr3L_8_19405001 chr3L_19405001 RAL-853_125b 2538 chr3L 19426744 19426765 chr3L 19426851 19426853 6 117 25.5 27.0 26.2 0.2 109 chr3L 19426744 intergenic not near genes chr3L 19426798 intergenic not near genes chr3L 19426853 intergenic not near genes chr3L_6_19425001 chr3L_19425001 RAL-853_125b 2539 chr3L 19429420 19429464 chr3L 19429560 19429604 20 136 21.5 19.5 20.5 0.9 184 chr3L 19429420 intergenic not near genes chr3L 19429512 intergenic not near genes chr3L 19429604 intergenic not near genes chr3L_20_19425001 chr3L_19425001 RAL-853_125b 2540 chr3L 19429468 19429479 chr3L 19429556 19429619 7 126 18.0 18.0 18.0 0.4 151 chr3L 19429468 intergenic not near genes chr3L 19429544 intergenic not near genes chr3L 19429619 intergenic not near genes chr3L_7_19425001 chr3L_19425001 RAL-853_125b 2541 chr3L 19436868 19436877 chr3L 19437011 19437020 5 143 9.5 14.0 11.8 0.4 152 chr3L 19436868 intergenic not near genes chr3L 19436944 intergenic not near genes chr3L 19437020 intergenic not near genes chr3L_5_19435001 chr3L_19435001 RAL-853_125b 2542 chr3L 19439132 19439193 chr3L 19439260 19439322 10 129 26.0 31.5 28.8 0.3 190 chr3L 19439132 intergenic not near genes chr3L 19439227 intergenic not near genes chr3L 19439322 intergenic not near genes chr3L_10_19435001 chr3L_19435001 RAL-853_125b 2543 chr3L 19488480 19488500 chr3L 19488612 19488632 5 132 5.0 10.5 7.8 0.6 152 chr3L 19488480 intergenic pncr009:3L -,CG32212 + chr3L 19488556 intergenic pncr009:3L -,CG32212 + chr3L 19488632 intergenic pncr009:3L -,CG32212 + chr3L_5_19485001 chr3L_19485001 RAL-853_125b 2544 chr3L 19498442 19498492 chr3L 19503618 19503668 18 5178 51.5 62.0 56.8 0.3 5226 chr3L 19498442 3` UTR CG9451 - chr3L 19501055 3` UTR CG9452 - chr3L 19503668 5` UTR CG9452 - chr3L_18_19500001 chr3L_19500001 RAL-853_125b 2545 chr3L 19527881 19527948 chr3L 19528010 19528077 27 129 10.0 11.5 10.8 2.3 196 chr3L 19527881 intergenic not near genes chr3L 19527979 intergenic not near genes chr3L 19528077 intergenic not near genes chr3L_27_19525001 chr3L_19525001 RAL-853_125b 2546 chr3L 19565897 19565958 chr3L 19566033 19566094 14 136 9.5 16.5 13.0 1.0 197 chr3L 19565897 intergenic not near genes chr3L 19565996 intergenic not near genes chr3L 19566094 intergenic not near genes chr3L_14_19565001 chr3L_19565001 RAL-853_125b 2547 chr3L 19792332 19792354 chr3L 19792477 19792499 14 145 16.0 14.5 15.2 0.9 167 chr3L 19792332 intron,intron CG42637 -,Gyc76C - chr3L 19792416 intron,intron CG42637 -,Gyc76C - chr3L 19792499 intron,intron CG42637 -,Gyc76C - chr3L_14_19790001 chr3L_19790001 RAL-853_125b 2548 chr3L 19820249 19820314 chr3L 19827848 19827913 412 16 7599 6.0 2.5 4.2 3.1 7664 chr3L 19820249 intron Deaf1 + chr3L 19824081 intron Deaf1 + chr3L 19827913 intron Deaf1 + chr3L_16_19820001 chr3L_19820001 RAL-853_125b 2549 chr3L 19848467 19848519 chr3L 19857707 19857759 roo 13 9240 11.5 8.5 10.0 1.2 9292 chr3L 19848467 intron Papss + chr3L 19853113 intron Papss + chr3L 19857759 intron Papss + chr3L_13_19850001 chr3L_19850001 RAL-853_125b 2550 chr3L 19861773 19861836 chr3L 19863611 19863674 S-element 16 1834 8.5 3.0 5.8 2.4 1901 chr3L 19861773 5` UTR CR45433 + chr3L 19862724 intergenic not near genes chr3L 19863674 intergenic not near genes chr3L_16_19860001 chr3L_19860001 RAL-853_125b 2551 chr3L 19933503 19933557 chr3L 19934375 19934429 6 872 30.5 18.5 24.5 0.2 926 chr3L 19933503 intergenic CR45678 + chr3L 19933966 5` UTR CR45678 + chr3L 19934429 intergenic CR45678 + chr3L_6_19930001 chr3L_19930001 RAL-853_125b 2552 chr3L 19962945 19962967 chr3L 19963046 19963095 6 121 11.5 17.0 14.2 0.4 150 chr3L 19962945 intron Ac76E + chr3L 19963020 intron Ac76E + chr3L 19963095 intron Ac76E + chr3L_6_19960001 chr3L_19960001 RAL-853_125b 2553 chr3L 19981164 19981230 chr3L 19981294 19981360 30 130 6.5 3.5 5.0 5.0 196 chr3L 19981164 intergenic not near genes chr3L 19981262 intergenic CG17732 + chr3L 19981360 intergenic CG17732 + chr3L_30_19980001 chr3L_19980001 RAL-853_125b 2554 chr3L 20038773 20038847 chr3L 20039001 20039074 15 227 16.0 18.0 17.0 0.8 301 chr3L 20038773 intergenic not near genes chr3L 20038924 intergenic not near genes chr3L 20039074 intergenic not near genes chr3L_15_20035001 chr3L_20035001 RAL-853_125b 2555 chr3L 20081699 20081768 chr3L 20081832 20081901 22 133 12.5 15.0 13.8 1.5 202 chr3L 20081699 intron sNPF-R - chr3L 20081800 intron sNPF-R - chr3L 20081901 intron sNPF-R - chr3L_22_20080001 chr3L_20080001 RAL-853_125b 2556 chr3L 20083395 20083424 chr3L 20083525 20083555 14 126 18.0 18.5 18.2 0.7 160 chr3L 20083395 intron sNPF-R - chr3L 20083475 intron sNPF-R - chr3L 20083555 intron sNPF-R - chr3L_14_20080001 chr3L_20080001 RAL-853_125b 2557 chr3L 20086747 20086808 chr3L 20086875 20086936 18 128 15.0 17.5 16.2 1.0 189 chr3L 20086747 intron sNPF-R - chr3L 20086842 intron sNPF-R - chr3L 20086936 intron sNPF-R - chr3L_18_20085001 chr3L_20085001 RAL-853_125b 2558 chr3L 20096213 20096283 chr3L 20096371 20096441 21 156 9.5 10.5 10.0 1.9 228 chr3L 20096213 intergenic not near genes chr3L 20096327 intergenic not near genes chr3L 20096441 intergenic not near genes chr3L_21_20095001 chr3L_20095001 RAL-853_125b 2559 chr3L 20113615 20113681 chr3L 20122922 20122983 roo 25 9307 8.5 5.0 6.8 3.2 9368 chr3L 20113615 intergenic not near genes chr3L 20118299 intergenic not near genes chr3L 20122983 intergenic not near genes chr3L_25_20115001 chr3L_20115001 RAL-853_125b 2560 chr3L 20143042 20143102 chr3L 20143172 20143232 28 130 4.0 8.5 6.2 3.9 190 chr3L 20143042 intergenic not near genes chr3L 20143137 intergenic not near genes chr3L 20143232 intergenic not near genes chr3L_28_20140001 chr3L_20140001 RAL-853_125b 2561 chr3L 20150688 20150757 chr3L 20150869 20150927 23 180 12.0 15.5 13.8 1.6 239 chr3L 20150688 3` UTR CG42674 - chr3L 20150808 3` UTR CG42674 - chr3L 20150927 3` UTR CG42674 - chr3L_23_20150001 chr3L_20150001 RAL-853_125b 2562 chr3L 20156114 20156190 chr3L 20156286 20156348 10 167 23.0 26.0 24.5 0.4 234 chr3L 20156114 intron CG42674 - chr3L 20156231 intron CG42674 - chr3L 20156348 intron CG42674 - chr3L_10_20155001 chr3L_20155001 RAL-853_125b 2563 chr3L 20166159 20166229 chr3L 20166294 20166368 18 137 14.0 12.0 13.0 1.3 209 chr3L 20166159 intron CG42674 - chr3L 20166264 intron CG42674 - chr3L 20166368 intron CG42674 - chr3L_18_20165001 chr3L_20165001 RAL-853_125b 2564 chr3L 20187413 20187485 chr3L 20187542 20187614 23 129 40.5 43.5 42.0 0.5 201 chr3L 20187413 intron CG42674 - chr3L 20187514 intron CG42674 - chr3L 20187614 intron CG42674 - chr3L_23_20185001 chr3L_20185001 RAL-853_125b 2565 chr3L 20212565 20212586 chr3L 20218192 20218213 mdg3 9 5627 12.5 1.5 7.0 1.1 5648 chr3L 20212565 intergenic CG7017 - chr3L 20215389 intergenic not near genes chr3L 20218213 intergenic CG6933 - chr3L_9_20215001 chr3L_20215001 RAL-853_125b 2566 chr3L 20218183 20218218 chr3L 20218349 20218384 9 166 4.0 14.0 9.0 0.9 201 chr3L 20218183 intergenic CG6933 - chr3L 20218284 intergenic CG6933 - chr3L 20218384 intergenic CG6933 - chr3L_9_20215001 chr3L_20215001 RAL-853_125b 2567 chr3L 20256608 20256661 chr3L 20256768 20256821 7 158 24.5 32.5 28.5 0.2 213 chr3L 20256608 exon rdgC + chr3L 20256714 intron rdgC + chr3L 20256821 intron rdgC + chr3L_7_20255001 chr3L_20255001 RAL-853_125b 2568 chr3L 20257288 20257344 chr3L 20258458 20258514 pogo 12 1170 15.0 14.0 14.5 0.8 1226 chr3L 20257288 intron rdgC + chr3L 20257901 intron rdgC + chr3L 20258514 intron rdgC + chr3L_12_20255001 chr3L_20255001 RAL-853_125b 2569 chr3L 20290271 20290338 chr3L 20290406 20290473 22 133 20.5 18.0 19.2 1.1 202 chr3L 20290271 intron gogo - chr3L 20290372 intron gogo - chr3L 20290473 intron gogo - chr3L_22_20290001 chr3L_20290001 RAL-853_125b 2570 chr3L 20344242 20344255 chr3L 20344382 20344395 INE-1 4 140 16.5 17.5 17.0 0.2 153 chr3L 20344242 3` UTR Spn77Bc + chr3L 20344318 3` UTR Spn77Bc + chr3L 20344395 intergenic Spn77Bc + chr3L_4_20340001 chr3L_20340001 RAL-853_125b 2571 chr3L 20386897 20386971 chr3L 20387049 20387123 16 152 31.0 33.0 32.0 0.5 226 chr3L 20386897 intron fbl + chr3L 20387010 intron fbl + chr3L 20387123 intron fbl + chr3L_16_20385001 chr3L_20385001 RAL-853_125b 2572 chr3L 20402154 20402217 chr3L 20402285 20402348 10 131 25.5 21.5 23.5 0.4 194 chr3L 20402154 intergenic not near genes chr3L 20402251 intergenic not near genes chr3L 20402348 intergenic not near genes chr3L_10_20400001 chr3L_20400001 RAL-853_125b 2573 chr3L 20403539 20403597 chr3L 20403684 20403742 13 145 37.0 35.0 36.0 0.4 203 chr3L 20403539 intergenic not near genes chr3L 20403640 intergenic not near genes chr3L 20403742 intergenic not near genes chr3L_13_20400001 chr3L_20400001 RAL-853_125b 2574 chr3L 20405535 20405603 chr3L 20405669 20405737 18 131 22.0 26.0 24.0 0.7 202 chr3L 20405535 intergenic not near genes chr3L 20405636 intergenic not near genes chr3L 20405737 intergenic not near genes chr3L_18_20405001 chr3L_20405001 RAL-853_125b 2575 chr3L 20409842 20409907 chr3L 20409978 20409999 7 117 7.5 7.5 7.5 0.8 157 chr3L 20409842 intron CG13248 - chr3L 20409920 intron CG13248 - chr3L 20409999 intron CG13248 - chr3L_7_20405001 chr3L_20405001 RAL-853_125b 2576 chr3L 20447716 20447724 chr3L 20447849 20447857 4 133 14.5 14.0 14.2 0.3 141 chr3L 20447716 intron CG5910 + chr3L 20447786 intron CG5910 + chr3L 20447857 intron CG5910 + chr3L_4_20445001 chr3L_20445001 RAL-853_125b 2577 chr3L 20462539 20462583 chr3L 20462670 20462698 11 130 12.5 10.5 11.5 0.9 159 chr3L 20462539 intron atk - chr3L 20462618 intron atk - chr3L 20462698 intron atk - chr3L_11_20460001 chr3L_20460001 RAL-853_125b 2578 chr3L 20476714 20476782 chr3L 20484363 20484386 springer 29 7647 9.0 9.0 9.0 2.9 7672 chr3L 20476714 3` UTR isoQC + chr3L 20480550 intergenic not near genes chr3L 20484386 3` UTR ZnT77C - chr3L_29_20480001 chr3L_20480001 RAL-853_125b 2579 chr3L 20525228 20525229 chr3L 22908066 22908067 12 2382838 24.5 42.5 33.5 0.3 2382839 chr3L 20525228 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_12_21715001 chr3L_21715001 RAL-853_125b 2580 chr3L 20536273 20536327 chr3L 20536404 20536458 5 131 27.5 24.0 25.8 0.2 185 chr3L 20536273 intron Rcd2 - chr3L 20536366 intron Rcd2 - chr3L 20536458 intron Rcd2 - chr3L_5_20535001 chr3L_20535001 RAL-853_125b 2581 chr3L 20548328 20548378 chr3L 20548467 20548517 5 139 6.5 10.5 8.5 0.5 189 chr3L 20548328 intergenic not near genes chr3L 20548422 intergenic not near genes chr3L 20548517 intergenic not near genes chr3L_5_20545001 chr3L_20545001 RAL-853_125b 2582 chr3L 20590021 20590090 chr3L 20590610 20590667 412 24 581 7.0 7.5 7.2 2.9 646 chr3L 20590021 intergenic not near genes chr3L 20590344 intergenic not near genes chr3L 20590667 intergenic not near genes chr3L_24_20590001 chr3L_20590001 RAL-853_125b 2583 chr3L 20634982 20635035 chr3L 20635114 20635127 4 111 29.0 24.0 26.5 0.1 145 chr3L 20634982 intergenic CR44682 + chr3L 20635054 intergenic CR44682 + chr3L 20635127 intergenic CR44682 + chr3L_4_20635001 chr3L_20635001 RAL-853_125b 2584 chr3L 20710714 20710788 chr3L 20710841 20710893 29 125 4.0 6.0 5.0 4.8 179 chr3L 20710714 intergenic not near genes chr3L 20710804 intergenic not near genes chr3L 20710893 intergenic not near genes chr3L_29_20710001 chr3L_20710001 RAL-853_125b 2585 chr3L 20821243 20821301 chr3L 20824762 20824815 NOF 20 3518 12.5 18.5 15.5 1.2 3572 chr3L 20821243 intron Pka-R1 + chr3L 20823029 intron Pka-R1 + chr3L 20824815 intron Pka-R1 + chr3L_20_20820001 chr3L_20820001 RAL-853_125b 2586 chr3L 20849226 20849288 chr3L 20849355 20849412 26 129 8.0 9.0 8.5 2.7 186 chr3L 20849226 intron CG32432 - chr3L 20849319 intron CG32432 - chr3L 20849412 intron CG32432 - chr3L_26_20845001 chr3L_20845001 RAL-853_125b 2587 chr3L 20858035 20858092 chr3L 20858184 20858241 24 149 5.0 5.0 5.0 4.0 206 chr3L 20858035 intron CG32432 - chr3L 20858138 intron CG32432 - chr3L 20858241 intron CG32432 - chr3L_24_20855001 chr3L_20855001 RAL-853_125b 2588 chr3L 20865423 20865481 chr3L 20865553 20865611 16 130 9.0 12.0 10.5 1.4 188 chr3L 20865423 intron CG32432 - chr3L 20865517 intron CG32432 - chr3L 20865611 intron CG32432 - chr3L_16_20865001 chr3L_20865001 RAL-853_125b 2589 chr3L 20868113 20868190 chr3L 20868485 20868562 12 370 28.5 27.0 27.8 0.4 449 chr3L 20868113 intron CG32432 - chr3L 20868338 intron CG32432 - chr3L 20868562 intron CG32432 - chr3L_12_20865001 chr3L_20865001 RAL-853_125b 2590 chr3L 20889743 20889778 chr3L 20889874 20889909 4 131 17.0 18.5 17.8 0.2 166 chr3L 20889743 intergenic not near genes chr3L 20889826 intergenic not near genes chr3L 20889909 intergenic not near genes chr3L_4_20885001 chr3L_20885001 RAL-853_125b 2591 chr3L 20986717 20986783 chr3L 20986845 20986911 8 128 26.0 23.5 24.8 0.3 194 chr3L 20986717 intergenic not near genes chr3L 20986814 intergenic not near genes chr3L 20986911 intergenic not near genes chr3L_8_20985001 chr3L_20985001 RAL-853_125b 2592 chr3L 21014882 21014889 chr3L 21023413 21023416 Tirant 5 8527 20.0 11.0 15.5 0.3 8534 chr3L 21014882 intron skd - chr3L 21019149 intron skd - chr3L 21023416 intron skd - chr3L_5_21015001 chr3L_21015001 RAL-853_125b 2593 chr3L 21014894 21014947 chr3L 21023408 21023417 Tirant 25 8515 7.0 10.0 8.5 2.6 8523 chr3L 21014894 intron skd - chr3L 21019156 intron skd - chr3L 21023417 intron skd - chr3L_25_21015001 chr3L_21015001 RAL-853_125b 2594 chr3L 21039646 21039704 chr3L 21039787 21039845 12 137 6.5 14.5 10.5 1.0 199 chr3L 21039646 intron siz + chr3L 21039746 intron siz + chr3L 21039845 intron siz + chr3L_12_21035001 chr3L_21035001 RAL-853_125b 2595 chr3L 21047597 21047627 chr3L 21047770 21047800 4 173 20.5 15.0 17.8 0.2 203 chr3L 21047597 intron siz + chr3L 21047698 intron siz + chr3L 21047800 intron siz + chr3L_4_21045001 chr3L_21045001 RAL-853_125b 2596 chr3L 21047630 21047661 chr3L 21047759 21047834 4 161 17.5 14.0 15.8 0.2 204 chr3L 21047630 intron siz + chr3L 21047732 intron siz + chr3L 21047834 intron siz + chr3L_4_21045001 chr3L_21045001 RAL-853_125b 2597 chr3L 21069918 21069988 chr3L 21070052 21070122 15 131 11.0 12.5 11.8 1.2 204 chr3L 21069918 intron siz + chr3L 21070020 intron siz + chr3L 21070122 intron siz + chr3L_15_21070001 chr3L_21070001 RAL-853_125b 2598 chr3L 21082163 21082232 chr3L 21082291 21082360 27 128 5.5 8.0 6.8 3.5 197 chr3L 21082163 intron ko - chr3L 21082262 intron ko - chr3L 21082360 intron ko - chr3L_27_21080001 chr3L_21080001 RAL-853_125b 2599 chr3L 21100474 21100496 chr3L 21100786 21100808 5 312 22.5 8.0 15.2 0.3 334 chr3L 21100474 intron ko - chr3L 21100641 intron ko - chr3L 21100808 intron ko - chr3L_5_21100001 chr3L_21100001 RAL-853_125b 2600 chr3L 21145273 21145286 chr3L 21145403 21145416 4 130 21.0 12.5 16.8 0.2 143 chr3L 21145273 intron Ac78C - chr3L 21145344 intron Ac78C - chr3L 21145416 intron Ac78C - chr3L_4_21145001 chr3L_21145001 RAL-853_125b 2601 chr3L 21151823 21151834 chr3L 21156957 21156968 flea 9 5134 17.5 7.5 12.5 0.7 5145 chr3L 21151823 intron Ac78C - chr3L 21154396 intron Ac78C - chr3L 21156968 intron Ac78C - chr3L_9_21150001 chr3L_21150001 RAL-853_125b 2602 chr3L 21151835 21151890 chr3L 21156953 21157011 flea 24 5132 6.5 7.0 6.8 3.1 5176 chr3L 21151835 intron Ac78C - chr3L 21154423 intron Ac78C - chr3L 21157011 intron Ac78C - chr3L_24_21150001 chr3L_21150001 RAL-853_125b 2603 chr3L 21170012 21170085 chr3L 21170287 21170361 22 273 19.0 19.0 19.0 1.1 349 chr3L 21170012 intron Ac78C - chr3L 21170186 intron Ac78C - chr3L 21170361 intron Ac78C - chr3L_22_21170001 chr3L_21170001 RAL-853_125b 2604 chr3L 21243699 21243739 chr3L 21251312 21251327 412 6 7592 8.5 7.0 7.8 0.7 7628 chr3L 21243699 intron Eip78C + chr3L 21247513 intron Eip78C + chr3L 21251327 intron Eip78C + chr3L_6_21245001 chr3L_21245001 RAL-853_125b 2605 chr3L 21259614 21259667 chr3L 21259759 21259832 5 164 14.0 12.5 13.2 0.4 218 chr3L 21259614 intron Eip78C + chr3L 21259723 intron Eip78C + chr3L 21259832 intron Eip78C + chr3L_5_21255001 chr3L_21255001 RAL-853_125b 2606 chr3L 21306102 21306166 chr3L 21315311 21315375 roo 30 9208 8.5 10.0 9.2 2.9 9273 chr3L 21306102 3` UTR CG7632 + chr3L 21310738 intron Pc - chr3L 21315375 3` UTR Pc - chr3L_30_21310001 chr3L_21310001 RAL-853_125b 2607 chr3L 21319483 21319499 chr3L 21319623 21319639 6 140 26.5 21.0 23.8 0.2 156 chr3L 21319483 5` UTR Rab26 + chr3L 21319561 5` UTR Rab26 + chr3L 21319639 5` UTR Rab26 + chr3L_6_21315001 chr3L_21315001 RAL-853_125b 2608 chr3L 21319502 21319555 chr3L 21319616 21319695 26 139 19.5 17.0 18.2 1.4 193 chr3L 21319502 5` UTR Rab26 + chr3L 21319598 5` UTR Rab26 + chr3L 21319695 5` UTR Rab26 + chr3L_26_21315001 chr3L_21315001 RAL-853_125b 2609 chr3L 21361676 21361718 chr3L 21362679 21362722 G2 4 1004 25.0 11.0 18.0 0.2 1046 chr3L 21361676 intergenic CG32440 + chr3L 21362199 intergenic not near genes chr3L 21362722 intergenic not near genes chr3L_4_21360001 chr3L_21360001 RAL-853_125b 2610 chr3L 21364896 21364953 chr3L 21365036 21365093 17 140 20.0 14.0 17.0 0.9 197 chr3L 21364896 intergenic not near genes chr3L 21364994 intergenic not near genes chr3L 21365093 intergenic not near genes chr3L_17_21360001 chr3L_21360001 RAL-853_125b 2611 chr3L 21372689 21372748 chr3L 21379247 21379304 McClintock 10 6557 7.0 5.0 6.0 1.4 6615 chr3L 21372689 intergenic not near genes chr3L 21375996 intergenic not near genes chr3L 21379304 intergenic not near genes chr3L_10_21375001 chr3L_21375001 RAL-853_125b 2612 chr3L 21399409 21399429 chr3L 21399542 21399562 4 133 31.5 22.5 27.0 0.1 153 chr3L 21399409 intron rgn + chr3L 21399486 intron rgn + chr3L 21399562 intron rgn + chr3L_4_21395001 chr3L_21395001 RAL-853_125b 2613 chr3L 21406951 21407026 chr3L 21407080 21407135 23 127 14.0 12.0 13.0 1.6 184 chr3L 21406951 intron rgn + chr3L 21407043 intron rgn + chr3L 21407135 intron rgn + chr3L_23_21405001 chr3L_21405001 RAL-853_125b 2614 chr3L 21408432 21408482 chr3L 21408560 21408610 10 128 13.5 25.0 19.2 0.5 178 chr3L 21408432 intron rgn + chr3L 21408521 intron rgn + chr3L 21408610 intron rgn + chr3L_10_21405001 chr3L_21405001 RAL-853_125b 2615 chr3L 21414487 21414540 chr3L 21414613 21414666 18 126 11.5 12.0 11.8 1.4 179 chr3L 21414487 intron rgn + chr3L 21414576 intron rgn + chr3L 21414666 intron rgn + chr3L_18_21410001 chr3L_21410001 RAL-853_125b 2616 chr3L 21437555 21437626 chr3L 21437712 21437783 16 157 11.0 14.5 12.8 1.2 228 chr3L 21437555 3` UTR Aef1 + chr3L 21437669 3` UTR Aef1 + chr3L 21437783 3` UTR Aef1 + chr3L_16_21435001 chr3L_21435001 RAL-853_125b 2617 chr3L 4341330 4341332 chr3L 21448026 21448027 6 17106695 31.5 35.0 33.2 0.2 17106697 chr3L 4341330 intron Cip4 - chr3L 12894678 3` UTR CG14118 + chr3L 21448027 3` UTR Syx7 + chr3L_6_12890001 chr3L_12890001 RAL-853_125b 2618 chr3L 21498825 21498854 chr3L 21500500 21500537 1360 13 1683 8.5 15.0 11.8 1.0 1712 chr3L 21498825 5` UTR,intron CR43933 +,Glg1 - chr3L 21499681 intron Glg1 - chr3L 21500537 intron Glg1 - chr3L_13_21495001 chr3L_21495001 RAL-853_125b 2619 chr3L 21501125 21501160 chr3L 21501269 21501304 1360 10 142 8.5 14.5 11.5 0.8 179 chr3L 21501125 intron Glg1 - chr3L 21501214 intron Glg1 - chr3L 21501304 intron Glg1 - chr3L_10_21500001 chr3L_21500001 RAL-853_125b 2620 chr3L 21509605 21509685 chr3L 21509732 21509812 12 127 12.5 15.0 13.8 0.8 207 chr3L 21509605 intron M6 + chr3L 21509708 intron M6 + chr3L 21509812 intron M6 + chr3L_12_21505001 chr3L_21505001 RAL-853_125b 2621 chr3L 21637280 21637341 chr3L 21637417 21637478 14 135 18.0 16.0 17.0 0.8 198 chr3L 21637280 exon CG32444 + chr3L 21637379 intron CG32444 + chr3L 21637478 intron CG32444 + chr3L_14_21635001 chr3L_21635001 RAL-853_125b 2622 chr3L 21649727 21649804 chr3L 21650001 21650078 28 273 10.5 17.5 14.0 1.9 351 chr3L 21649727 intron CG43980 + chr3L 21649902 intron CG43980 + chr3L 21650078 intron CG43980 + chr3L_28_21645001 chr3L_21645001 RAL-853_125b 2623 chr3L 21671014 21671078 chr3L 21671212 21671276 12 198 18.5 22.0 20.2 0.6 262 chr3L 21671014 intergenic not near genes chr3L 21671145 intergenic not near genes chr3L 21671276 intergenic not near genes chr3L_12_21670001 chr3L_21670001 RAL-853_125b 2624 chr3L 21736291 21736338 chr3L 21736557 21736589 5 263 5.0 23.5 14.2 0.3 298 chr3L 21736291 intergenic CR43888 + chr3L 21736440 intergenic CR43888 + chr3L 21736589 intergenic CR43888 + chr3L_5_21735001 chr3L_21735001 RAL-853_125b 2625 chr3L 21736340 21736374 chr3L 21736546 21736625 10 244 5.5 22.0 13.8 0.7 285 chr3L 21736340 intergenic CR43888 + chr3L 21736482 intergenic CR43888 + chr3L 21736625 intergenic CR43888 + chr3L_10_21735001 chr3L_21735001 RAL-853_125b 2626 chr3L 21749317 21749323 chr3L 21754497 21754533 Doc 6 5200 15.0 11.5 13.2 0.4 5216 chr3L 21749317 intron Syn1 - chr3L 21751925 intron Syn1 - chr3L 21754533 intron Syn1 - chr3L_6_21750001 chr3L_21750001 RAL-853_125b 2627 chr3L 21758500 21758554 chr3L 21758847 21758901 28 347 68.5 41.0 54.8 0.5 401 chr3L 21758500 intron Syn1 - chr3L 21758700 intron Syn1 - chr3L 21758901 intron Syn1 - chr3L_28_21755001 chr3L_21755001 RAL-853_125b 2628 chr3L 21769009 21769078 chr3L 21769146 21769215 24 135 4.5 7.0 5.8 3.5 206 chr3L 21769009 intron,intron Syn1 -,CG42689 + chr3L 21769112 intron,intron Syn1 -,CG42689 + chr3L 21769215 intron,intron Syn1 -,CG42689 + chr3L_24_21765001 chr3L_21765001 RAL-853_125b 2629 chr3L 21769997 21770034 chr3L 21770132 21770141 10 129 12.5 11.5 12.0 0.8 144 chr3L 21769997 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770069 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770141 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L_10_21770001 chr3L_21770001 RAL-853_125b 2630 chr3L 21776627 21776871 chr3L 21776760 21777006 19 137 10.5 4.5 7.5 2.2 379 chr3L 21776627 intron,intron CG42689 +,CG42552 + chr3L 21776816 intron,intron CG42689 +,CG42552 + chr3L 21777006 exon,intron CG42689 +,CG42552 + chr3L_19_21775001 chr3L_21775001 RAL-853_125b 2631 chr3L 21809944 21809949 chr3L 21810075 21810093 5 136 27.5 24.5 26.0 0.2 149 chr3L 21809944 intron eg + chr3L 21810018 intron eg + chr3L 21810093 intron eg + chr3L_5_21810001 chr3L_21810001 RAL-853_125b 2632 chr3L 21809955 21809970 chr3L 21810071 21810076 5 124 22.5 23.5 23.0 0.2 121 chr3L 21809955 intron eg + chr3L 21810016 intron eg + chr3L 21810076 intron eg + chr3L_5_21810001 chr3L_21810001 RAL-853_125b 2633 chr3L 21836684 21836754 chr3L 21836820 21836890 23 136 18.0 14.0 16.0 1.4 206 chr3L 21836684 3` UTR,3` UTR Nopp140 +,P5CDh1 - chr3L 21836787 3` UTR P5CDh1 - chr3L 21836890 3` UTR P5CDh1 - chr3L_23_21835001 chr3L_21835001 RAL-853_125b 2634 chr3L 21845200 21845254 chr3L 21845482 21845536 8 282 23.5 24.0 23.8 0.3 336 chr3L 21845200 5` UTR mub + chr3L 21845368 intron mub + chr3L 21845536 intron mub + chr3L_8_21845001 chr3L_21845001 RAL-853_125b 2635 chr3L 21849449 21849527 chr3L 21849581 21849659 28 132 6.0 6.0 6.0 4.0 210 chr3L 21849449 intron mub + chr3L 21849554 intron mub + chr3L 21849659 intron mub + chr3L_28_21845001 chr3L_21845001 RAL-853_125b 2636 chr3L 21852219 21852272 chr3L 21852362 21852415 14 135 12.0 19.5 15.8 0.8 196 chr3L 21852219 intron mub + chr3L 21852317 intron mub + chr3L 21852415 intron mub + chr3L_14_21850001 chr3L_21850001 RAL-853_125b 2637 chr3L 21874955 21875021 chr3L 21875162 21875228 23 207 16.0 18.5 17.2 1.3 273 chr3L 21874955 intron mub + chr3L 21875092 intron mub + chr3L 21875228 intron mub + chr3L_23_21875001 chr3L_21875001 RAL-853_125b 2638 chr3L 21900986 21900995 chr3L 21901129 21901138 6 143 21.5 21.5 21.5 0.3 152 chr3L 21900986 intron mub + chr3L 21901062 intron mub + chr3L 21901138 intron mub + chr3L_6_21900001 chr3L_21900001 RAL-853_125b 2639 chr3L 21900997 21901037 chr3L 21901123 21901180 20 139 18.0 19.0 18.5 1.0 183 chr3L 21900997 intron mub + chr3L 21901088 intron mub + chr3L 21901180 intron mub + chr3L_20_21900001 chr3L_21900001 RAL-853_125b 2640 chr3L 21952402 21952479 chr3L 21953195 21953272 transib1 28 790 9.5 16.0 12.8 2.0 870 chr3L 21952402 intergenic not near genes chr3L 21952837 intergenic not near genes chr3L 21953272 intergenic not near genes chr3L_28_21950001 chr3L_21950001 RAL-853_125b 2641 chr3L 22008804 22008867 chr3L 22008931 22008994 6 116 29.0 30.5 29.8 0.2 190 chr3L 22008804 intergenic not near genes chr3L 22008899 intergenic not near genes chr3L 22008994 intergenic not near genes chr3L_6_22005001 chr3L_22005001 RAL-853_125b 2642 chr3L 22016322 22016388 chr3L 22016487 22016554 13 165 9.0 8.5 8.8 1.3 232 chr3L 22016322 intergenic not near genes chr3L 22016438 intergenic not near genes chr3L 22016554 intergenic not near genes chr3L_13_22015001 chr3L_22015001 RAL-853_125b 2643 chr3L 22033647 22033715 chr3L 22033775 22033843 15 128 15.5 11.0 13.2 1.1 196 chr3L 22033647 intergenic not near genes chr3L 22033745 intergenic not near genes chr3L 22033843 intergenic not near genes chr3L_15_22030001 chr3L_22030001 RAL-853_125b 2644 chr3L 22046146 22046203 chr3L 22046299 22046356 14 153 22.5 22.0 22.2 0.6 210 chr3L 22046146 intron Oct-TyrR + chr3L 22046251 intron Oct-TyrR + chr3L 22046356 intron Oct-TyrR + chr3L_14_22045001 chr3L_22045001 RAL-853_125b 2645 chr3L 22058248 22058301 chr3L 22058575 22058628 7 327 23.0 28.5 25.8 0.3 380 chr3L 22058248 intron Oct-TyrR + chr3L 22058438 intron Oct-TyrR + chr3L 22058628 intron Oct-TyrR + chr3L_7_22055001 chr3L_22055001 RAL-853_125b 2646 chr3L 22092763 22092825 chr3L 22092914 22092975 14 150 31.0 33.0 32.0 0.4 212 chr3L 22092763 intergenic not near genes chr3L 22092869 intergenic not near genes chr3L 22092975 intergenic not near genes chr3L_14_22090001 chr3L_22090001 RAL-853_125b 2647 chr3L 22099632 22099697 chr3L 22105868 22105933 3S18 27 6236 11.5 7.5 9.5 2.6 6301 chr3L 22099632 intergenic not near genes chr3L 22102782 intergenic not near genes chr3L 22105933 intergenic not near genes chr3L_27_22100001 chr3L_22100001 RAL-853_125b 2648 chr3L 22106546 22106555 chr3L 22106684 22106693 4 137 20.0 6.0 13.0 0.3 147 chr3L 22106546 intergenic not near genes chr3L 22106620 intergenic not near genes chr3L 22106693 intergenic not near genes chr3L_4_22105001 chr3L_22105001 RAL-853_125b 2649 chr3L 22124758 22124835 chr3L 22124891 22124968 38 132 8.5 6.5 7.5 4.5 210 chr3L 22124758 intergenic not near genes chr3L 22124863 intergenic not near genes chr3L 22124968 intergenic not near genes chr3L_38_22120001 chr3L_22120001 RAL-853_125b 2650 chr3L 22130457 22130520 chr3L 22130653 22130716 6 196 17.5 19.5 18.5 0.3 259 chr3L 22130457 intergenic not near genes chr3L 22130586 intergenic not near genes chr3L 22130716 intergenic not near genes chr3L_6_22130001 chr3L_22130001 RAL-853_125b 2651 chr3L 22137481 22137537 chr3L 22137608 22137664 22 125 16.5 15.0 15.8 1.3 183 chr3L 22137481 intron olf413 + chr3L 22137572 intron olf413 + chr3L 22137664 intron olf413 + chr3L_22_22135001 chr3L_22135001 RAL-853_125b 2652 chr3L 22139485 22139537 chr3L 22139629 22139681 10 142 18.5 23.0 20.8 0.5 196 chr3L 22139485 intron olf413 + chr3L 22139583 intron olf413 + chr3L 22139681 intron olf413 + chr3L_10_22135001 chr3L_22135001 RAL-853_125b 2653 chr3L 22166399 22166471 chr3L 22166527 22166583 15 125 12.0 12.5 12.2 1.1 184 chr3L 22166399 intron olf413 + chr3L 22166491 intron olf413 + chr3L 22166583 intron olf413 + chr3L_15_22165001 chr3L_22165001 RAL-853_125b 2654 chr3L 22169412 22169486 chr3L 22169555 22169588 10 138 10.0 15.0 12.5 0.7 176 chr3L 22169412 intron olf413 + chr3L 22169500 intron olf413 + chr3L 22169588 intron olf413 + chr3L_10_22165001 chr3L_22165001 RAL-853_125b 2655 chr3L 22179104 22179116 chr3L 22179205 22179210 4 112 16.5 15.5 16.0 0.2 106 chr3L 22179104 intron olf413 + chr3L 22179157 intron olf413 + chr3L 22179210 intron olf413 + chr3L_4_22175001 chr3L_22175001 RAL-853_125b 2656 chr3L 22194291 22194312 chr3L 22194412 22194439 5 126 17.5 21.5 19.5 0.2 148 chr3L 22194291 intron olf413 + chr3L 22194365 intron olf413 + chr3L 22194439 intron olf413 + chr3L_5_22190001 chr3L_22190001 RAL-853_125b 2657 chr3L 22223398 22223457 chr3L 22223609 22223668 9 204 34.0 28.5 31.2 0.3 270 chr3L 22223398 intron olf413 + chr3L 22223533 intron olf413 + chr3L 22223668 exon olf413 + chr3L_9_22220001 chr3L_22220001 RAL-853_125b 2658 chr3L 22379914 22379947 chr3L 22380063 22380096 9 147 31.5 30.5 31.0 0.3 182 chr3L 22379914 intron Ten-m - chr3L 22380005 intron Ten-m - chr3L 22380096 intron Ten-m - chr3L_9_22380001 chr3L_22380001 RAL-853_125b 2659 chr3L 22402490 22402557 chr3L 22402705 22402752 10 198 40.5 36.5 38.5 0.3 262 chr3L 22402490 intron Ten-m - chr3L 22402621 intron Ten-m - chr3L 22402752 intron Ten-m - chr3L_10_22400001 chr3L_22400001 RAL-853_125b 2660 chr3L 22411341 22411385 chr3L 22411454 22411467 15 111 17.5 19.0 18.2 0.8 126 chr3L 22411341 intergenic not near genes chr3L 22411404 intergenic not near genes chr3L 22411467 intergenic not near genes chr3L_15_22410001 chr3L_22410001 RAL-853_125b 2661 chr3L 22447161 22447222 chr3L 22447302 22447363 27 140 6.0 12.0 9.0 2.7 202 chr3L 22447161 intergenic not near genes chr3L 22447262 intergenic not near genes chr3L 22447363 intergenic not near genes chr3L_27_22445001 chr3L_22445001 RAL-853_125b 2662 chr3L 22477027 22477084 chr3L 22477168 22477225 6 141 20.0 25.0 22.5 0.3 198 chr3L 22477027 intergenic not near genes chr3L 22477126 intergenic not near genes chr3L 22477225 intergenic not near genes chr3L_6_22475001 chr3L_22475001 RAL-853_125b 2663 chr3L 22525514 22525590 chr3L 22530085 22530161 16 4575 41.0 40.5 40.8 0.4 4647 chr3L 22525514 intergenic not near genes chr3L 22527838 intergenic not near genes chr3L 22530161 intergenic not near genes chr3L_16_22525001 chr3L_22525001 RAL-853_125b 2664 chr3L 22543038 22543098 chr3L 22543165 22543225 12 127 12.0 11.5 11.8 0.9 187 chr3L 22543038 intergenic not near genes chr3L 22543132 intergenic not near genes chr3L 22543225 intergenic not near genes chr3L_12_22540001 chr3L_22540001 RAL-853_125b 2665 chr3L 22554378 22554448 chr3L 22554504 22554574 25 126 23.5 21.5 22.5 1.1 196 chr3L 22554378 intergenic not near genes chr3L 22554476 intergenic not near genes chr3L 22554574 intergenic not near genes chr3L_25_22550001 chr3L_22550001 RAL-853_125b 2666 chr3L 22555727 22555782 chr3L 22563247 22563296 blood 27 7519 9.0 7.0 8.0 3.0 7569 chr3L 22555727 intergenic not near genes chr3L 22559512 intergenic not near genes chr3L 22563296 intergenic not near genes chr3L_27_22555001 chr3L_22555001 RAL-853_125b 2667 chr3L 22555785 22555796 chr3L 22563240 22563305 blood 5 7499 6.0 5.5 5.8 0.7 7520 chr3L 22555785 intergenic not near genes chr3L 22559545 intergenic not near genes chr3L 22563305 intergenic not near genes chr3L_5_22555001 chr3L_22555001 RAL-853_125b 2668 chr3L 22564502 22564530 chr3L 22564964 22564992 6 462 33.5 45.5 39.5 0.1 490 chr3L 22564502 intergenic not near genes chr3L 22564747 intergenic not near genes chr3L 22564992 intergenic not near genes chr3L_6_22560001 chr3L_22560001 RAL-853_125b 2669 chr3L 22569538 22569594 chr3L 22569686 22569742 9 143 13.5 12.0 12.8 0.7 204 chr3L 22569538 intergenic not near genes chr3L 22569640 intergenic not near genes chr3L 22569742 intergenic not near genes chr3L_9_22565001 chr3L_22565001 RAL-853_125b 2670 chr3L 22577582 22577603 chr3L 22582420 22582441 Doc 8 4837 23.0 12.5 17.8 0.4 4859 chr3L 22577582 intergenic not near genes chr3L 22580012 intergenic not near genes chr3L 22582441 3` UTR CG14459 - chr3L_8_22580001 chr3L_22580001 RAL-853_125b 2671 chr3L 22577605 22577639 chr3L 22582412 22582434 Doc 14 4828 12.5 12.5 12.5 1.0 4829 chr3L 22577605 intergenic not near genes chr3L 22580020 intergenic not near genes chr3L 22582434 3` UTR CG14459 - chr3L_14_22580001 chr3L_22580001 RAL-853_125b 2672 chr3L 22617146 22617215 chr3L 22624648 22624717 blood 24 7501 9.0 8.0 8.5 2.5 7571 chr3L 22617146 intron CG14459 - chr3L 22620932 intron CG14459 - chr3L 22624717 intron CG14459 - chr3L_24_22620001 chr3L_22620001 RAL-853_125b 2673 chr3L 22626827 22626894 chr3L 22626967 22627034 12 140 29.5 28.0 28.8 0.4 207 chr3L 22626827 intron CG14459 - chr3L 22626930 intron CG14459 - chr3L 22627034 intron CG14459 - chr3L_12_22625001 chr3L_22625001 RAL-853_125b 2674 chr3L 22678040 22678101 chr3L 22678183 22678244 12 140 36.5 35.5 36.0 0.3 204 chr3L 22678040 intron CG14457 + chr3L 22678142 intron CG14457 + chr3L 22678244 intron CG14457 + chr3L_12_22675001 chr3L_22675001 RAL-853_125b 2675 chr3L 22721123 22721152 chr3L 22721675 22721694 6 545 45.0 46.0 45.5 0.1 571 chr3L 22721123 intergenic CG14451 - chr3L 22721408 exon CG14451 - chr3L 22721694 exon CG14451 - chr3L_6_22720001 chr3L_22720001 RAL-853_125b 2676 chr3L 22732424 22732487 chr3L 22732555 22732618 17 130 17.5 20.5 19.0 0.8 194 chr3L 22732424 intron CG11367 + chr3L 22732521 intron CG11367 + chr3L 22732618 exon CG11367 + chr3L_17_22730001 chr3L_22730001 RAL-853_125b 2677 chr3L 22756365 22756423 chr3L 22756492 22756550 28 126 20.5 24.5 22.5 1.2 185 chr3L 22756365 intron SPoCk + chr3L 22756458 intron SPoCk + chr3L 22756550 intron SPoCk + chr3L_28_22755001 chr3L_22755001 RAL-853_125b 2678 chr3L 22761343 22761401 chr3L 22766827 22766885 Ivk 25 5484 12.5 10.5 11.5 2.0 5542 chr3L 22761343 intron SPoCk + chr3L 22764114 intron SPoCk + chr3L 22766885 intron SPoCk + chr3L_25_22760001 chr3L_22760001 RAL-853_125b 2679 chr3L 22771600 22771660 chr3L 22771717 22771792 24 124 21.0 19.5 20.2 1.1 192 chr3L 22771600 intron SPoCk + chr3L 22771696 intron SPoCk + chr3L 22771792 intron SPoCk + chr3L_24_22770001 chr3L_22770001 RAL-853_125b 2680 chr3L 22821906 22821948 chr3L 22822037 22822079 6 131 23.5 15.5 19.5 0.3 173 chr3L 22821906 intron jim - chr3L 22821992 intron jim - chr3L 22822079 intron jim - chr3L_6_22820001 chr3L_22820001 RAL-853_125b 2681 chr3L 22825521 22825559 chr3L 22825648 22825686 6 127 22.0 28.0 25.0 0.2 165 chr3L 22825521 intron jim - chr3L 22825604 intron jim - chr3L 22825686 intron jim - chr3L_6_22825001 chr3L_22825001 RAL-853_125b 2682 chr3L 22838580 22838611 chr3L 22838665 22838742 5 115 27.5 28.5 28.0 0.2 162 chr3L 22838580 intergenic CG11226 + chr3L 22838661 intergenic CG11226 + chr3L 22838742 intergenic not near genes chr3L_5_22835001 chr3L_22835001 RAL-853_125b 2683 chr3L 22853420 22853718 chr3L 22853557 22853854 31 136 9.0 33.5 21.2 1.4 434 chr3L 22853420 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853637 5` UTR CR43426 + chr3L 22853854 5` UTR CR43426 + chr3L_31_22850001 chr3L_22850001 RAL-853_125b 2684 chr3L 22865942 22865995 chr3L 22867125 22867178 Doc 25 1183 13.5 11.0 12.2 1.9 1236 chr3L 22865942 exon CG33170 + chr3L 22866560 intron CG33170 + chr3L 22867178 intron CG33170 + chr3L_25_22865001 chr3L_22865001 RAL-853_125b 2685 chr3L 22897179 22897225 chr3L 22897307 22897330 14 128 12.5 21.5 17.0 0.8 151 chr3L 22897179 intergenic not near genes chr3L 22897254 intergenic not near genes chr3L 22897330 intergenic not near genes chr3L_14_22895001 chr3L_22895001 RAL-853_125b 2686 chr3L 9102764 9102783 chr3L 22908066 22908066 5 13805293 31.5 42.5 37.0 0.1 13805302 chr3L 9102764 exon bol - chr3L 16005415 exon mRpS31 + chr3L 22908066 intergenic not near genes chr3L_5_16005001 chr3L_16005001 RAL-853_125b 2687 chr3L 19220633 19220637 chr3L 22908066 22908066 19 3687431 45.5 42.5 44.0 0.4 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_19_21060001 chr3L_21060001 RAL-853_125b 2688 chr3L 20525228 20525230 chr3L 22908066 22908066 18 2382837 24.0 42.5 33.2 0.5 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_18_21715001 chr3L_21715001 RAL-853_125b 2689 chr3L 9410424 9410424 chr3L 22908067 22908067 4 13497643 30.5 42.5 36.5 0.1 13497643 chr3L 9410424 intron CG4022 - chr3L 16159246 intron CG5151 - chr3L 22908067 intergenic not near genes chr3L_4_16155001 chr3L_16155001 RAL-853_125b 2690 chr3L 19220632 19220637 chr3L 22908067 22908067 8 3687432 45.5 42.5 44.0 0.2 3687435 chr3L 19220632 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_8_21060001 chr3L_21060001 RAL-853_125b 2691 chr3L 22908980 22909040 chr3L 22909121 22909181 9 141 28.0 31.5 29.8 0.3 201 chr3L 22908980 intergenic CR45661 + chr3L 22909080 intergenic CR45661 + chr3L 22909181 intergenic CR45661 + chr3L_9_22905001 chr3L_22905001 RAL-853_125b 2692 chr3L 22918896 22918939 chr3L 22919033 22919064 12 132 14.0 18.5 16.2 0.7 168 chr3L 22918896 intron CG12768 + chr3L 22918980 intron CG12768 + chr3L 22919064 intron CG12768 + chr3L_12_22915001 chr3L_22915001 RAL-853_125b 2693 chr3L 22966375 22966445 chr3L 22966648 22966719 22 272 17.0 20.0 18.5 1.1 344 chr3L 22966375 intergenic not near genes chr3L 22966547 intergenic not near genes chr3L 22966719 intergenic not near genes chr3L_22_22965001 chr3L_22965001 RAL-853_125b 2694 chr3L 22974335 22974359 chr3L 22974454 22974488 4 126 28.5 23.5 26.0 0.1 153 chr3L 22974335 intergenic not near genes chr3L 22974412 intergenic not near genes chr3L 22974488 intergenic not near genes chr3L_4_22970001 chr3L_22970001 RAL-853_125b 2695 chr3L 22989820 22989880 chr3L 22996844 22996904 297 19 7022 11.5 4.5 8.0 2.1 7084 chr3L 22989820 intergenic not near genes chr3L 22993362 intergenic not near genes chr3L 22996904 intergenic not near genes chr3L_19_22990001 chr3L_22990001 RAL-853_125b 2696 chr3L 23004897 23004913 chr3L 23005273 23005289 4 376 21.5 20.5 21.0 0.2 392 chr3L 23004897 intron nrm + chr3L 23005093 intron nrm + chr3L 23005289 intron nrm + chr3L_4_23005001 chr3L_23005001 RAL-853_125b 2697 chr3L 23042189 23042247 chr3L 23048992 23049050 gypsy6 15 6802 13.0 19.0 16.0 0.9 6861 chr3L 23042189 intergenic not near genes chr3L 23045620 intergenic not near genes chr3L 23049050 intergenic not near genes chr3L_15_23045001 chr3L_23045001 RAL-853_125b 2698 chr3L 23088241 23088316 chr3L 23088373 23088447 23 127 12.0 10.0 11.0 1.9 206 chr3L 23088241 intergenic not near genes chr3L 23088344 intergenic not near genes chr3L 23088447 intergenic not near genes chr3L_23_23085001 chr3L_23085001 RAL-853_125b 2699 chr3L 23101264 23101281 chr3L 23101525 23101542 4 261 25.0 28.0 26.5 0.1 278 chr3L 23101264 intron CkIIalpha + chr3L 23101403 intron CkIIalpha + chr3L 23101542 intron CkIIalpha + chr3L_4_23100001 chr3L_23100001 RAL-853_125b 2700 chr3L 23165872 23165906 chr3L 23173368 23173400 Quasimodo 5 7495 12.5 3.5 8.0 0.6 7528 chr3L 23165872 intergenic not near genes chr3L 23169636 intergenic not near genes chr3L 23173400 intergenic not near genes chr3L_5_23165001 chr3L_23165001 RAL-853_125b 2701 chr3L 23182217 23182292 chr3L 23182381 23182439 10 161 36.5 38.0 37.2 0.3 222 chr3L 23182217 intron CG34031 + chr3L 23182328 intron CG34031 + chr3L 23182439 intron CG34031 + chr3L_10_23180001 chr3L_23180001 RAL-853_125b 2702 chr3L 23182785 23182808 chr3L 23182911 23182934 5 126 27.0 19.5 23.2 0.2 149 chr3L 23182785 intron CG34031 + chr3L 23182860 intron CG34031 + chr3L 23182934 intron CG34031 + chr3L_5_23180001 chr3L_23180001 RAL-853_125b 2703 chr3L 23182813 23182843 chr3L 23182904 23182969 13 122 19.5 20.5 20.0 0.6 156 chr3L 23182813 intron CG34031 + chr3L 23182891 intron CG34031 + chr3L 23182969 intron CG34031 + chr3L_13_23180001 chr3L_23180001 RAL-853_125b 2704 chr3L 23205406 23205449 chr3L 23205686 23205710 8 278 24.5 15.5 20.0 0.4 304 chr3L 23205406 intergenic not near genes chr3L 23205558 intergenic not near genes chr3L 23205710 intergenic not near genes chr3L_8_23205001 chr3L_23205001 RAL-853_125b 2705 chr3L 23251938 23251942 chr3L 23252070 23252109 4 158 25.5 22.5 24.0 0.2 171 chr3L 23251938 intron nAChRalpha4 + chr3L 23252024 intron nAChRalpha4 + chr3L 23252109 intron nAChRalpha4 + chr3L_4_23250001 chr3L_23250001 RAL-853_125b 2706 chr3L 23285590 23285653 chr3L 23286307 23286370 17 728 17.5 11.5 14.5 1.1 780 chr3L 23285590 3` UTR nAChRalpha4 + chr3L 23285980 3` UTR nAChRalpha4 + chr3L 23286370 3` UTR nAChRalpha4 + chr3L_17_23285001 chr3L_23285001 RAL-853_125b 2707 chr3L 23288225 23288295 chr3L 23288954 23289024 INE-1 27 727 21.0 12.0 16.5 1.5 799 chr3L 23288225 intergenic not near genes chr3L 23288624 intergenic not near genes chr3L 23289024 intergenic not near genes chr3L_27_23285001 chr3L_23285001 RAL-853_125b 2708 chr3L 23428209 23428265 chr3L 23428339 23428395 7 129 22.5 21.0 21.8 0.3 186 chr3L 23428209 intergenic not near genes chr3L 23428302 intergenic not near genes chr3L 23428395 intergenic not near genes chr3L_7_23425001 chr3L_23425001 RAL-853_125b 2709 chr3L 23450060 23450121 chr3L 23450612 23450673 24 551 15.0 17.5 16.2 1.4 613 chr3L 23450060 intergenic not near genes chr3L 23450366 intergenic not near genes chr3L 23450673 intergenic not near genes chr3L_24_23450001 chr3L_23450001 RAL-853_125b 2710 chr3L 23485814 23485885 chr3L 23485942 23486013 7 128 22.0 22.5 22.2 0.3 199 chr3L 23485814 intergenic not near genes chr3L 23485914 intergenic not near genes chr3L 23486013 intergenic not near genes chr3L_7_23485001 chr3L_23485001 RAL-853_125b 2711 chr3L 23665484 23665527 chr3L 23665624 23665667 gypsy8 5 140 33.5 37.5 35.5 0.1 183 chr3L 23665484 intron AGO3 + chr3L 23665576 intron AGO3 + chr3L 23665667 intron AGO3 + chr3L_5_23665001 chr3L_23665001 RAL-853_125b 2712 chr3L 23772894 23772901 chr3L 23773030 23773037 5 136 23.0 22.5 22.8 0.2 143 chr3L 23772894 intergenic not near genes chr3L 23772966 intergenic not near genes chr3L 23773037 intergenic not near genes chr3L_5_23770001 chr3L_23770001 RAL-853_125b 2713 chr3L 23823979 23824016 chr3L 23824442 23824479 8 463 10.5 7.5 9.0 0.8 500 chr3L 23823979 intergenic not near genes chr3L 23824229 intergenic not near genes chr3L 23824479 intergenic not near genes chr3L_8_23820001 chr3L_23820001 RAL-853_125b 2714 chr3L 23848825 23848830 chr3L 23849699 23849704 R1A1-element 4 874 4.0 30.5 17.2 0.2 879 chr3L 23848825 intron CG40470 - chr3L 23849264 intron CG40470 - chr3L 23849704 intron CG40470 - chr3L_4_23845001 chr3L_23845001 RAL-853_125b 2715 chr3L 23875478 23875549 chr3L 23875609 23875663 21 127 8.5 14.0 11.2 1.7 185 chr3L 23875478 intron CG40470 - chr3L 23875570 intron CG40470 - chr3L 23875663 intron CG40470 - chr3L_21_23875001 chr3L_23875001 RAL-853_125b 2716 chr3L 23913402 23913462 chr3L 23913543 23913603 10 141 17.5 16.5 17.0 0.6 201 chr3L 23913402 intron CG40470 - chr3L 23913502 intron CG40470 - chr3L 23913603 intron CG40470 - chr3L_10_23910001 chr3L_23910001 RAL-853_125b 2717 chr3L 24009632 24009683 chr3L 24009864 24009915 6 232 28.0 25.5 26.8 0.2 283 chr3L 24009632 intergenic CR40053 - chr3L 24009774 intergenic CR40053 - chr3L 24009915 intergenic CR40053 - chr3L_6_24005001 chr3L_24005001 RAL-853_125b 2718 chr3L 24012366 24012427 chr3L 24020757 24020818 roo 18 8390 8.5 7.5 8.0 2.0 8452 chr3L 24012366 intergenic not near genes chr3L 24016592 intergenic not near genes chr3L 24020818 intergenic not near genes chr3L_18_24015001 chr3L_24015001 RAL-853_125b 2719 chr3L 24021245 24021302 chr3L 24022452 24022509 1360 8 1207 22.5 23.5 23.0 0.3 1264 chr3L 24021245 intergenic not near genes chr3L 24021877 intergenic not near genes chr3L 24022509 intergenic not near genes chr3L_8_24020001 chr3L_24020001 RAL-853_125b 2720 chr3L 24168755 24168778 chr3L 24176123 24176156 ZAM 8 7367 21.0 10.5 15.8 0.5 7401 chr3L 24168755 intron Snap25 + chr3L 24172456 intron Snap25 + chr3L 24176156 intron Snap25 + chr3L_8_24170001 chr3L_24170001 RAL-853_125b 2721 chr3L 24168779 24168822 chr3L 24176122 24176160 ZAM 10 7356 11.0 9.0 10.0 0.9 7381 chr3L 24168779 intron Snap25 + chr3L 24172470 intron Snap25 + chr3L 24176160 intron Snap25 + chr3L_10_24170001 chr3L_24170001 RAL-853_125b 2722 chr3L 24791852 24791884 chr3L 24796681 24796713 Doc 11 4829 9.5 6.0 7.8 1.2 4861 chr3L 24791852 intergenic not near genes chr3L 24794282 intergenic not near genes chr3L 24796713 intergenic not near genes chr3L_11_24790001 chr3L_24790001 RAL-853_125b 2723 chr3L 25331608 25331653 chr3L 25331727 25331782 7 129 10.0 7.5 8.8 0.7 174 chr3L 25331608 intergenic not near genes chr3L 25331695 intergenic not near genes chr3L 25331782 intergenic not near genes chr3L_7_25330001 chr3L_25330001 RAL-853_125b 2724 chr3L 23289028 23289065 chr3L 25843668 25843705 12 2554632 42.0 25.0 33.5 0.3 2554677 chr3L 23289028 intergenic not near genes chr3L 24566366 intergenic not near genes chr3L 25843705 intron CG40178 - chr3L_12_24565001 chr3L_24565001 RAL-853_125b 2725 chr3L 26008723 26008791 chr3L 26008920 26008988 17 197 15.5 12.0 13.8 1.1 265 chr3L 26008723 intron CG40178 - chr3L 26008856 intron CG40178 - chr3L 26008988 intron CG40178 - chr3L_17_26005001 chr3L_26005001 RAL-853_125b 2726 chr3L 26694909 26694947 chr3L 26695028 26695064 5 124 23.5 27.5 25.5 0.2 155 chr3L 26694909 intergenic not near genes chr3L 26694986 intergenic not near genes chr3L 26695064 intergenic not near genes chr3L_5_26690001 chr3L_26690001 RAL-853_125b 2727 chr3L 23941239 23941240 chr3L 26882298 26882299 1360 5 2941059 29.5 2.5 16.0 0.3 2941060 chr3L 23941239 intron CG40470 - chr3L 25411769 intergenic not near genes chr3L 26882299 intergenic not near genes chr3L_5_25410001 chr3L_25410001 RAL-853_125b 2728 chr3L 27365348 27365400 chr3L 27365712 27365764 12 358 22.0 18.5 20.2 0.6 416 chr3L 27365348 intron Dbp80 + chr3L 27365556 intron Dbp80 + chr3L 27365764 intron Dbp80 + chr3L_12_27365001 chr3L_27365001 RAL-853_125b 2729 chr3L 27368851 27368898 chr3L 27369446 27369494 5 595 24.0 21.0 22.5 0.2 643 chr3L 27368851 intron Dbp80 + chr3L 27369172 intron Dbp80 + chr3L 27369494 intron Dbp80 + chr3L_5_27365001 chr3L_27365001 RAL-853_125b 2730 chr3L 27390673 27390712 chr3L 27390781 27390841 12 126 63.0 59.0 61.0 0.2 168 chr3L 27390673 intron Dbp80 + chr3L 27390757 intron Dbp80 + chr3L 27390841 intron Dbp80 + chr3L_12_27390001 chr3L_27390001 RAL-853_125b 2731 chr3L 27980658 27980696 chr3L 27985506 27985544 Doc 5 4848 19.5 4.0 11.8 0.4 4886 chr3L 27980658 intron CG17514 - chr3L 27983101 intron CG17514 - chr3L 27985544 intron CG17514 - chr3L_5_27980001 chr3L_27980001 RAL-853_125b 2732 chr3R 1062360 1062403 chr3R 1062568 1062611 5 208 9.5 8.5 9.0 0.5 251 chr3R 1062360 intron CG15831 + chr3R 1062486 intron CG15831 + chr3R 1062611 intron CG15831 + chr3R_5_1060001 chr3R_1060001 RAL-853_125b 2733 chr3R 1521169 1521183 chr3R 1521267 1521312 11 130 32.5 29.0 30.8 0.3 143 chr3R 1521169 intergenic not near genes chr3R 1521240 intergenic not near genes chr3R 1521312 intergenic not near genes chr3R_11_1520001 chr3R_1520001 RAL-853_125b 2734 chr3R 2446824 2446856 chr3R 2449028 2449056 1360 6 2205 92.0 66.5 79.2 0.1 2232 chr3R 2446824 intergenic not near genes chr3R 2447940 intergenic not near genes chr3R 2449056 intergenic not near genes chr3R_6_2445001 chr3R_2445001 RAL-853_125b 2735 chr3R 2534102 2534158 chr3R 2541704 2541770 9 7611 28.5 20.5 24.5 0.4 7668 chr3R 2534102 intergenic not near genes chr3R 2537936 intergenic not near genes chr3R 2541770 intergenic not near genes chr3R_9_2535001 chr3R_2535001 RAL-853_125b 2736 chr3R 2556908 2556951 chr3R 2557592 2557634 9 684 33.0 24.0 28.5 0.3 726 chr3R 2556908 intron CG41056 - chr3R 2557271 intron CG41056 - chr3R 2557634 intron CG41056 - chr3R_9_2555001 chr3R_2555001 RAL-853_125b 2737 chr3R 3267254 3267309 chr3R 3267385 3267440 6 131 23.5 33.5 28.5 0.2 186 chr3R 3267254 intergenic not near genes chr3R 3267347 intergenic not near genes chr3R 3267440 intergenic not near genes chr3R_6_3265001 chr3R_3265001 RAL-853_125b 2738 chr3R 3752690 3752755 chr3R 3752823 3752853 7 128 21.0 17.5 19.2 0.3 163 chr3R 3752690 intergenic CG41128 + chr3R 3752772 intergenic CG41128 + chr3R 3752853 intergenic CG41128 + chr3R_7_3750001 chr3R_3750001 RAL-853_125b 2739 chr3R 4063762 4063806 chr3R 4069092 4069100 10 5321 10.5 26.5 18.5 0.5 5338 chr3R 4063762 intergenic not near genes chr3R 4066431 intergenic not near genes chr3R 4069100 intergenic not near genes chr3R_10_4065001 chr3R_4065001 RAL-853_125b 2740 chr3R 4132853 4132930 chr3R 4133057 4133134 15 204 3.5 2.0 2.8 3.9 281 chr3R 4132853 intron Gfat1 + chr3R 4132994 intron Gfat1 + chr3R 4133134 intron Gfat1 + chr3R_15_4130001 chr3R_4130001 RAL-853_125b 2741 chr3R 4161498 4161567 chr3R 4161625 4161689 20 123 11.5 12.5 12.0 1.5 191 chr3R 4161498 3` UTR CG40198 - chr3R 4161594 exon CG40198 - chr3R 4161689 exon CG40198 - chr3R_20_4160001 chr3R_4160001 RAL-853_125b 2742 chr3R 4206037 4206095 chr3R 4211662 4211720 mdg3 16 5625 8.5 8.5 8.5 1.7 5683 chr3R 4206037 intron CG14636 - chr3R 4208878 intron CG14636 - chr3R 4211720 intron CG14636 - chr3R_16_4205001 chr3R_4205001 RAL-853_125b 2743 chr3R 4366713 4366782 chr3R 4375146 4375194 roo 27 8432 9.5 7.5 8.5 2.8 8481 chr3R 4366713 3` UTR CG1090 + chr3R 4370954 intergenic not near genes chr3R 4375194 5` UTR CR44922 + chr3R_27_4370001 chr3R_4370001 RAL-853_125b 2744 chr3R 4408372 4408429 chr3R 4412726 4412783 Juan 29 4353 9.0 13.0 11.0 2.4 4411 chr3R 4408372 intron CG32944 - chr3R 4410578 intron CG32944 - chr3R 4412783 intron CG32944 - chr3R_29_4410001 chr3R_4410001 RAL-853_125b 2745 chr3R 4609506 4609571 chr3R 4610720 4610785 1360 29 1214 10.5 9.0 9.8 2.7 1279 chr3R 4609506 intergenic not near genes chr3R 4610146 intergenic not near genes chr3R 4610785 intergenic not near genes chr3R_29_4610001 chr3R_4610001 RAL-853_125b 2746 chr3R 4647882 4647957 chr3R 4648133 4648208 16 251 27.5 29.0 28.2 0.5 326 chr3R 4647882 exon,3` UTR rpk +,CR44155 - chr3R 4648045 exon,3` UTR rpk +,CR44155 - chr3R 4648208 3` UTR,3` UTR rpk +,CR44155 - chr3R_16_4645001 chr3R_4645001 RAL-853_125b 2747 chr3R 4680663 4680730 chr3R 4680792 4680859 7 129 29.5 31.0 30.2 0.2 196 chr3R 4680663 intron CG43427 + chr3R 4680761 intron CG43427 + chr3R 4680859 intron CG43427 + chr3R_7_4680001 chr3R_4680001 RAL-853_125b 2748 chr3R 4722312 4722335 chr3R 4722499 4722522 5 187 21.0 19.5 20.2 0.2 210 chr3R 4722312 intron Nep2 - chr3R 4722417 intron Nep2 - chr3R 4722522 intron Nep2 - chr3R_5_4720001 chr3R_4720001 RAL-853_125b 2749 chr3R 4722336 4722369 chr3R 4722498 4722556 12 180 16.0 19.5 17.8 0.6 220 chr3R 4722336 intron Nep2 - chr3R 4722446 intron Nep2 - chr3R 4722556 intron Nep2 - chr3R_12_4720001 chr3R_4720001 RAL-853_125b 2750 chr3R 4733642 4733688 chr3R 4733816 4733862 5 174 32.0 32.0 32.0 0.2 220 chr3R 4733642 intergenic not near genes chr3R 4733752 intergenic not near genes chr3R 4733862 intergenic not near genes chr3R_5_4730001 chr3R_4730001 RAL-853_125b 2751 chr3R 4753202 4753240 chr3R 4757555 4757587 F-element 25 4352 15.0 13.0 14.0 1.7 4385 chr3R 4753202 intron,intron atms +,CG44098 - chr3R 4755394 intron,intron atms +,CG44098 - chr3R 4757587 intron,exon atms +,CG44098 - chr3R_25_4755001 chr3R_4755001 RAL-853_125b 2752 chr3R 4753241 4753263 chr3R 4757540 4757600 F-element 18 4346 9.0 9.0 9.0 1.8 4359 chr3R 4753241 intron,intron atms +,CG44098 - chr3R 4755420 intron,intron atms +,CG44098 - chr3R 4757600 intron,exon atms +,CG44098 - chr3R_18_4755001 chr3R_4755001 RAL-853_125b 2753 chr3R 4759680 4759718 chr3R 4761227 4761265 hopper2 8 1547 14.0 32.0 23.0 0.3 1585 chr3R 4759680 intron,intron atms +,CG44098 - chr3R 4760472 intron,intron atms +,CG44098 - chr3R 4761265 intron,intron atms +,CG44098 - chr3R_8_4760001 chr3R_4760001 RAL-853_125b 2754 chr3R 4769121 4769184 chr3R 4769249 4769312 9 128 30.5 33.5 32.0 0.3 191 chr3R 4769121 intron,intron atms +,CG44098 - chr3R 4769216 intron,intron atms +,CG44098 - chr3R 4769312 intron,intron atms +,CG44098 - chr3R_9_4765001 chr3R_4765001 RAL-853_125b 2755 chr3R 4861521 4861596 chr3R 4861652 4861691 12 124 34.5 37.5 36.0 0.3 170 chr3R 4861521 intron opa + chr3R 4861606 intron opa + chr3R 4861691 intron opa + chr3R_12_4860001 chr3R_4860001 RAL-853_125b 2756 chr3R 4887430 4887502 chr3R 4894857 4894910 rover 23 7423 6.5 9.0 7.8 2.6 7480 chr3R 4887430 intergenic not near genes chr3R 4891170 intergenic not near genes chr3R 4894910 intergenic not near genes chr3R_23_4890001 chr3R_4890001 RAL-853_125b 2757 chr3R 4896257 4896314 chr3R 4896400 4896457 21 143 6.0 7.0 6.5 2.8 200 chr3R 4896257 intergenic CR45580 + chr3R 4896357 intergenic CR45580 + chr3R 4896457 5` UTR CR45580 + chr3R_21_4895001 chr3R_4895001 RAL-853_125b 2758 chr3R 4948337 4948359 chr3R 4949009 4949031 10 671 33.5 31.5 32.5 0.3 694 chr3R 4948337 intergenic snRNA:U1:82Eb -,UbcD6 - chr3R 4948684 intergenic UbcD6 - chr3R 4949031 3` UTR UbcD6 - chr3R_10_4945001 chr3R_4945001 RAL-853_125b 2759 chr3R 4948366 4948392 chr3R 4949008 4949064 13 667 32.5 31.0 31.8 0.4 698 chr3R 4948366 intergenic snRNA:U1:82Eb -,UbcD6 - chr3R 4948715 intergenic UbcD6 - chr3R 4949064 3` UTR UbcD6 - chr3R_13_4945001 chr3R_4945001 RAL-853_125b 2760 chr3R 4960606 4960679 chr3R 4960767 4960788 18 150 19.0 16.0 17.5 1.0 182 chr3R 4960606 intron CG2016 - chr3R 4960697 5` UTR CG2016 - chr3R 4960788 5` UTR CG2016 - chr3R_18_4960001 chr3R_4960001 RAL-853_125b 2761 chr3R 4965964 4966022 chr3R 4966106 4966164 5 142 8.5 12.0 10.2 0.4 200 chr3R 4965964 intron CG1124 + chr3R 4966064 intron CG1124 + chr3R 4966164 intron CG1124 + chr3R_5_4965001 chr3R_4965001 RAL-853_125b 2762 chr3R 4972919 4972937 chr3R 4973088 4973106 jockey 6 167 18.0 12.0 15.0 0.4 187 chr3R 4972919 intergenic not near genes chr3R 4973012 intergenic not near genes chr3R 4973106 intergenic not near genes chr3R_6_4970001 chr3R_4970001 RAL-853_125b 2763 chr3R 4981376 4981415 chr3R 4981505 4981536 5 124 19.5 22.0 20.8 0.2 160 chr3R 4981376 intergenic not near genes chr3R 4981456 intergenic not near genes chr3R 4981536 intergenic CG14662 - chr3R_5_4980001 chr3R_4980001 RAL-853_125b 2764 chr3R 4984263 4984316 chr3R 4984405 4984458 13 142 14.0 11.5 12.8 0.9 195 chr3R 4984263 intergenic CG14662 -,CR43424 -,CR43478 + chr3R 4984360 intergenic CG14662 -,CR43424 -,CR43478 + chr3R 4984458 intergenic CR43424 -,CG14662 - chr3R_13_4980001 chr3R_4980001 RAL-853_125b 2765 chr3R 5023646 5023712 chr3R 5023905 5023976 22 263 11.5 9.5 10.5 1.9 330 chr3R 5023646 intergenic not near genes chr3R 5023811 intergenic not near genes chr3R 5023976 intergenic not near genes chr3R_22_5020001 chr3R_5020001 RAL-853_125b 2766 chr3R 5045800 5045875 chr3R 5052952 5053027 HMS-Beagle 23 7152 9.0 3.5 6.2 3.2 7227 chr3R 5045800 3` UTR CR43635 - chr3R 5049414 intergenic not near genes chr3R 5053027 intergenic CR45588 - chr3R_23_5045001 chr3R_5045001 RAL-853_125b 2767 chr3R 5067938 5068000 chr3R 5073505 5073567 mdg3 28 5567 17.0 17.5 17.2 1.5 5629 chr3R 5067938 intergenic not near genes chr3R 5070752 intergenic not near genes chr3R 5073567 intergenic not near genes chr3R_28_5070001 chr3R_5070001 RAL-853_125b 2768 chr3R 5134402 5134420 chr3R 5134478 5134550 5 114 15.0 15.0 15.0 0.3 148 chr3R 5134402 intergenic not near genes chr3R 5134476 intergenic not near genes chr3R 5134550 intergenic not near genes chr3R_5_5130001 chr3R_5130001 RAL-853_125b 2769 chr3R 5161905 5161969 chr3R 5162032 5162099 16 133 15.0 15.0 15.0 1.0 194 chr3R 5161905 intron dpr16 + chr3R 5162002 intron dpr16 + chr3R 5162099 intron dpr16 + chr3R_16_5160001 chr3R_5160001 RAL-853_125b 2770 chr3R 5162890 5162955 chr3R 5163092 5163157 17 202 10.5 9.0 9.8 1.6 267 chr3R 5162890 intron dpr16 + chr3R 5163024 intron dpr16 + chr3R 5163157 intron dpr16 + chr3R_17_5160001 chr3R_5160001 RAL-853_125b 2771 chr3R 5193869 5193927 chr3R 5194021 5194094 12 156 16.5 20.5 18.5 0.6 225 chr3R 5193869 intron cno - chr3R 5193982 intron cno - chr3R 5194094 intron cno - chr3R_12_5190001 chr3R_5190001 RAL-853_125b 2772 chr3R 5206910 5206979 chr3R 5207954 5208023 20 1042 19.5 23.5 21.5 0.9 1113 chr3R 5206910 intron cno - chr3R 5207466 intron cno - chr3R 5208023 intron cno - chr3R_20_5205001 chr3R_5205001 RAL-853_125b 2773 chr3R 5236168 5236245 chr3R 5236346 5236423 33 177 6.5 8.5 7.5 3.9 255 chr3R 5236168 3` UTR,3` UTR Mms19 +,rtp - chr3R 5236296 3` UTR rtp - chr3R 5236423 exon rtp - chr3R_33_5235001 chr3R_5235001 RAL-853_125b 2774 chr3R 5250856 5250909 chr3R 5251016 5251069 12 158 19.5 27.5 23.5 0.5 213 chr3R 5250856 intron CG12163 - chr3R 5250962 intron CG12163 - chr3R 5251069 intron CG12163 - chr3R_12_5250001 chr3R_5250001 RAL-853_125b 2775 chr3R 5278046 5278060 chr3R 5278177 5278191 9 131 24.0 9.5 16.8 0.5 145 chr3R 5278046 intron mtd - chr3R 5278118 intron mtd - chr3R 5278191 intron mtd - chr3R_9_5275001 chr3R_5275001 RAL-853_125b 2776 chr3R 5278063 5278106 chr3R 5278174 5278237 15 129 17.0 10.5 13.8 1.0 174 chr3R 5278063 intron mtd - chr3R 5278150 intron mtd - chr3R 5278237 intron mtd - chr3R_15_5275001 chr3R_5275001 RAL-853_125b 2777 chr3R 5280139 5280157 chr3R 5280267 5280285 6 128 16.0 6.0 11.0 0.5 146 chr3R 5280139 intron mtd - chr3R 5280212 intron mtd - chr3R 5280285 intron mtd - chr3R_6_5280001 chr3R_5280001 RAL-853_125b 2778 chr3R 5282943 5282989 chr3R 5283072 5283082 12 120 12.0 17.5 14.8 0.8 139 chr3R 5282943 intron mtd - chr3R 5283012 intron mtd - chr3R 5283082 intron mtd - chr3R_12_5280001 chr3R_5280001 RAL-853_125b 2779 chr3R 5338354 5338414 chr3R 5343581 5343641 Rt1c 27 5227 16.0 16.5 16.2 1.6 5287 chr3R 5338354 intron mtd - chr3R 5340998 intron mtd - chr3R 5343641 intron mtd - chr3R_27_5340001 chr3R_5340001 RAL-853_125b 2780 chr3R 5385946 5386003 chr3R 5386142 5386199 24 217 9.0 7.5 8.2 2.6 253 chr3R 5385946 intron kkv - chr3R 5386072 intron kkv - chr3R 5386199 intron kkv - chr3R_24_5385001 chr3R_5385001 RAL-853_125b 2781 chr3R 5445924 5445985 chr3R 5452434 5452495 Burdock 17 6510 8.0 9.5 8.8 1.7 6571 chr3R 5445924 intron CG14669 + chr3R 5449210 intron CG14669 + chr3R 5452495 intron CG14669 + chr3R_17_5445001 chr3R_5445001 RAL-853_125b 2782 chr3R 5680743 5680811 chr3R 5680877 5680945 26 133 10.0 8.5 9.2 2.5 202 chr3R 5680743 3` UTR Rab23 - chr3R 5680844 3` UTR Rab23 - chr3R 5680945 3` UTR Rab23 - chr3R_26_5680001 chr3R_5680001 RAL-853_125b 2783 chr3R 5688736 5688812 chr3R 5688907 5688958 35 164 8.0 8.0 8.0 3.9 222 chr3R 5688736 intron plx + chr3R 5688847 intron plx + chr3R 5688958 intron plx + chr3R_35_5685001 chr3R_5685001 RAL-853_125b 2784 chr3R 5746000 5746036 chr3R 5746255 5746327 pogo 6 285 7.0 8.5 7.8 0.7 327 chr3R 5746000 3` UTR Madm + chr3R 5746164 3` UTR Madm + chr3R 5746327 3` UTR Madm + chr3R_6_5745001 chr3R_5745001 RAL-853_125b 2785 chr3R 5746976 5747034 chr3R 5753217 5753275 diver 22 6241 7.0 6.5 6.8 2.8 6299 chr3R 5746976 intergenic Madm + chr3R 5750126 intergenic not near genes chr3R 5753275 intergenic CG2091 - chr3R_22_5750001 chr3R_5750001 RAL-853_125b 2786 chr3R 5769184 5769248 chr3R 5769332 5769396 11 148 25.0 23.0 24.0 0.4 212 chr3R 5769184 intron CG2082 - chr3R 5769290 intron CG2082 - chr3R 5769396 intron CG2082 - chr3R_11_5765001 chr3R_5765001 RAL-853_125b 2787 chr3R 5809070 5809135 chr3R 5809370 5809435 pogo 22 300 7.0 5.0 6.0 3.1 365 chr3R 5809070 3` UTR CG11000 + chr3R 5809252 3` UTR CG11000 + chr3R 5809435 3` UTR CG11000 + chr3R_22_5805001 chr3R_5805001 RAL-853_125b 2788 chr3R 5822343 5822398 chr3R 5823560 5823615 1360 23 1217 13.5 8.5 11.0 1.9 1272 chr3R 5822343 3` UTR CG2023 - chr3R 5822979 3` UTR CG2023 - chr3R 5823615 3` UTR CG2023 - chr3R_23_5820001 chr3R_5820001 RAL-853_125b 2789 chr3R 5836160 5836175 chr3R 5836312 5836328 10 154 31.5 20.5 26.0 0.4 168 chr3R 5836160 exon,3` UTR CG1208 +,CR45192 - chr3R 5836244 intron CG1208 + chr3R 5836328 intron CG1208 + chr3R_10_5835001 chr3R_5835001 RAL-853_125b 2790 chr3R 5927518 5927575 chr3R 5927806 5927865 pogo 28 289 6.0 7.0 6.5 3.7 347 chr3R 5927518 intron CG34113 - chr3R 5927692 intron CG34113 - chr3R 5927865 intron CG34113 - chr3R_28_5925001 chr3R_5925001 RAL-853_125b 2791 chr3R 5931805 5931848 chr3R 5931931 5931953 7 122 18.0 14.0 16.0 0.4 148 chr3R 5931805 intron CG34113 - chr3R 5931879 intron CG34113 - chr3R 5931953 intron CG34113 - chr3R_7_5930001 chr3R_5930001 RAL-853_125b 2792 chr3R 5967640 5967671 chr3R 5967800 5967835 12 161 12.5 6.0 9.2 1.2 195 chr3R 5967640 intergenic not near genes chr3R 5967738 intergenic not near genes chr3R 5967835 intergenic not near genes chr3R_12_5965001 chr3R_5965001 RAL-853_125b 2793 chr3R 5988069 5988142 chr3R 5988203 5988274 7 133 38.0 35.5 36.8 0.2 205 chr3R 5988069 intergenic not near genes chr3R 5988172 intergenic not near genes chr3R 5988274 intergenic not near genes chr3R_7_5985001 chr3R_5985001 RAL-853_125b 2794 chr3R 5988900 5988975 chr3R 5989032 5989107 14 132 18.5 15.5 17.0 0.8 207 chr3R 5988900 intergenic CR44927 + chr3R 5989004 intergenic CR44927 + chr3R 5989107 intergenic CR44927 + chr3R_14_5985001 chr3R_5985001 RAL-853_125b 2795 chr3R 6009454 6009522 chr3R 6009627 6009695 18 170 16.0 16.5 16.2 1.0 241 chr3R 6009454 intergenic not near genes chr3R 6009574 intergenic not near genes chr3R 6009695 intergenic not near genes chr3R_18_6005001 chr3R_6005001 RAL-853_125b 2796 chr3R 6010087 6010146 chr3R 6010233 6010293 22 147 12.0 11.5 11.8 1.7 206 chr3R 6010087 intergenic CG10280 - chr3R 6010190 intergenic CG10280 - chr3R 6010293 intergenic CG10280 - chr3R_22_6010001 chr3R_6010001 RAL-853_125b 2797 chr3R 6015566 6015579 chr3R 6015693 6015706 5 126 0.5 28.0 14.2 0.3 140 chr3R 6015566 intergenic not near genes chr3R 6015636 intergenic not near genes chr3R 6015706 intergenic not near genes chr3R_5_6015001 chr3R_6015001 RAL-853_125b 2798 chr3R 6015928 6015943 chr3R 6024452 6024474 Tirant 4 8529 20.0 9.5 14.8 0.3 8546 chr3R 6015928 intergenic not near genes chr3R 6020201 intergenic not near genes chr3R 6024474 intergenic not near genes chr3R_4_6020001 chr3R_6020001 RAL-853_125b 2799 chr3R 6015959 6015988 chr3R 6024444 6024519 Tirant 15 8520 5.5 7.5 6.5 2.0 8560 chr3R 6015959 intergenic not near genes chr3R 6020239 intergenic not near genes chr3R 6024519 intergenic not near genes chr3R_15_6020001 chr3R_6020001 RAL-853_125b 2800 chr3R 6033280 6033350 chr3R 6033412 6033482 27 129 16.0 16.0 16.0 1.6 202 chr3R 6033280 intergenic not near genes chr3R 6033381 intergenic not near genes chr3R 6033482 intergenic not near genes chr3R_27_6030001 chr3R_6030001 RAL-853_125b 2801 chr3R 6035106 6035164 chr3R 6035233 6035294 16 128 14.0 13.5 13.8 1.1 188 chr3R 6035106 intergenic not near genes chr3R 6035200 intergenic not near genes chr3R 6035294 intergenic not near genes chr3R_16_6035001 chr3R_6035001 RAL-853_125b 2802 chr3R 6101142 6101164 chr3R 6101286 6101318 4 151 30.5 31.0 30.8 0.1 176 chr3R 6101142 intergenic Gasp - chr3R 6101230 intergenic Gasp - chr3R 6101318 intergenic Gasp - chr3R_4_6100001 chr3R_6100001 RAL-853_125b 2803 chr3R 6121134 6121178 chr3R 6121369 6121446 BS 14 249 3.0 5.0 4.0 2.8 312 chr3R 6121134 intergenic not near genes chr3R 6121290 intergenic not near genes chr3R 6121446 intergenic not near genes chr3R_14_6120001 chr3R_6120001 RAL-853_125b 2804 chr3R 6124186 6124249 chr3R 6124320 6124383 12 133 17.5 16.5 17.0 0.7 197 chr3R 6124186 3` UTR Vha14-2 + chr3R 6124284 3` UTR Vha14-2 + chr3R 6124383 3` UTR Vha14-2 + chr3R_12_6120001 chr3R_6120001 RAL-853_125b 2805 chr3R 6141898 6141900 chr3R 6142010 6142020 6 120 19.5 20.0 19.8 0.3 122 chr3R 6141898 intergenic not near genes chr3R 6141959 intergenic not near genes chr3R 6142020 intergenic not near genes chr3R_6_6140001 chr3R_6140001 RAL-853_125b 2806 chr3R 6141903 6141942 chr3R 6141993 6142046 21 122 13.5 18.0 15.8 1.2 143 chr3R 6141903 intergenic not near genes chr3R 6141974 intergenic not near genes chr3R 6142046 intergenic not near genes chr3R_21_6140001 chr3R_6140001 RAL-853_125b 2807 chr3R 6158465 6158490 chr3R 6167098 6167123 Tirant 6 8633 25.5 9.0 17.2 0.3 8658 chr3R 6158465 intergenic not near genes chr3R 6162794 intergenic not near genes chr3R 6167123 intergenic CG1077 + chr3R_6_6160001 chr3R_6160001 RAL-853_125b 2808 chr3R 6158494 6158533 chr3R 6167091 6167166 Tirant 18 8624 16.0 7.5 11.8 1.4 8672 chr3R 6158494 intergenic not near genes chr3R 6162830 intergenic not near genes chr3R 6167166 intergenic CG1077 + chr3R_18_6160001 chr3R_6160001 RAL-853_125b 2809 chr3R 6175132 6175202 chr3R 6182454 6182536 HMS-Beagle2 17 7323 6.5 2.0 4.2 3.3 7404 chr3R 6175132 intergenic Osi1 + chr3R 6178834 intron CR45194 + chr3R 6182536 intergenic CR45194 + chr3R_17_6175001 chr3R_6175001 RAL-853_125b 2810 chr3R 6191126 6191189 chr3R 6191256 6191318 22 127 24.5 22.5 23.5 0.9 192 chr3R 6191126 intron NPFR + chr3R 6191222 intron NPFR + chr3R 6191318 intron NPFR + chr3R_22_6190001 chr3R_6190001 RAL-853_125b 2811 chr3R 6192597 6192615 chr3R 6192727 6192731 5 127 40.0 25.5 32.8 0.1 134 chr3R 6192597 exon NPFR + chr3R 6192664 intron NPFR + chr3R 6192731 intron NPFR + chr3R_5_6190001 chr3R_6190001 RAL-853_125b 2812 chr3R 6192618 6192660 chr3R 6192721 6192724 13 120 28.5 25.5 27.0 0.5 106 chr3R 6192618 exon NPFR + chr3R 6192671 intron NPFR + chr3R 6192724 intron NPFR + chr3R_13_6190001 chr3R_6190001 RAL-853_125b 2813 chr3R 6187748 6187808 chr3R 6195526 6195548 5 7744 35.5 37.0 36.2 0.1 7800 chr3R 6187748 intron NPFR + chr3R 6191648 intron NPFR + chr3R 6195548 intergenic NPFR + chr3R_5_6190001 chr3R_6190001 RAL-853_125b 2814 chr3R 6203929 6203978 chr3R 6204111 6204160 11 181 16.0 19.5 17.8 0.6 231 chr3R 6203929 intron Osi24 + chr3R 6204044 intron Osi24 + chr3R 6204160 intron Osi24 + chr3R_11_6200001 chr3R_6200001 RAL-853_125b 2815 chr3R 6206248 6206266 chr3R 6206515 6206533 BS 6 267 19.0 11.5 15.2 0.4 285 chr3R 6206248 exon Osi24 + chr3R 6206390 intron Osi24 + chr3R 6206533 intron Osi24 + chr3R_6_6205001 chr3R_6205001 RAL-853_125b 2816 chr3R 6206267 6206301 chr3R 6206514 6206568 BS 19 263 13.0 11.5 12.2 1.4 301 chr3R 6206267 exon Osi24 + chr3R 6206418 intron Osi24 + chr3R 6206568 intron Osi24 + chr3R_19_6205001 chr3R_6205001 RAL-853_125b 2817 chr3R 6222273 6222326 chr3R 6222404 6222457 7 131 18.0 16.5 17.2 0.4 184 chr3R 6222273 intergenic Osi4 - chr3R 6222365 intergenic not near genes chr3R 6222457 intergenic not near genes chr3R_7_6220001 chr3R_6220001 RAL-853_125b 2818 chr3R 6365328 6365345 chr3R 6365470 6365487 5 141 8.0 17.0 12.5 0.4 159 chr3R 6365328 intron CG42724 - chr3R 6365408 intron CG42724 - chr3R 6365487 intron CG42724 - chr3R_5_6365001 chr3R_6365001 RAL-853_125b 2819 chr3R 6428769 6428835 chr3R 6428921 6428984 27 152 7.0 10.5 8.8 2.8 215 chr3R 6428769 intron gpp + chr3R 6428876 intron gpp + chr3R 6428984 intron gpp + chr3R_27_6425001 chr3R_6425001 RAL-853_125b 2820 chr3R 6444780 6444833 chr3R 6444906 6444960 7 125 28.5 25.0 26.8 0.3 180 chr3R 6444780 intron gpp + chr3R 6444870 intron gpp + chr3R 6444960 intron gpp + chr3R_7_6440001 chr3R_6440001 RAL-853_125b 2821 chr3R 6461550 6461571 chr3R 6461680 6461701 11 129 25.5 9.0 17.2 0.6 151 chr3R 6461550 intergenic not near genes chr3R 6461626 intergenic not near genes chr3R 6461701 intergenic not near genes chr3R_11_6460001 chr3R_6460001 RAL-853_125b 2822 chr3R 6461572 6461601 chr3R 6461678 6461731 17 129 15.0 9.0 12.0 1.3 159 chr3R 6461572 intergenic not near genes chr3R 6461652 intergenic not near genes chr3R 6461731 intergenic not near genes chr3R_17_6460001 chr3R_6460001 RAL-853_125b 2823 chr3R 6509984 6510043 chr3R 6515115 6515174 jockey 25 5130 6.5 9.0 7.8 2.8 5190 chr3R 6509984 intergenic not near genes chr3R 6512579 intergenic not near genes chr3R 6515174 intergenic not near genes chr3R_25_6510001 chr3R_6510001 RAL-853_125b 2824 chr3R 6523321 6523339 chr3R 6523747 6523765 4 426 27.5 22.5 25.0 0.2 444 chr3R 6523321 intergenic not near genes chr3R 6523543 intergenic not near genes chr3R 6523765 intergenic not near genes chr3R_4_6520001 chr3R_6520001 RAL-853_125b 2825 chr3R 6532064 6532127 chr3R 6532488 6532551 8 424 26.0 19.5 22.8 0.3 487 chr3R 6532064 intron dpr11 - chr3R 6532308 intron dpr11 - chr3R 6532551 intron dpr11 - chr3R_8_6530001 chr3R_6530001 RAL-853_125b 2826 chr3R 6552984 6553046 chr3R 6553099 6553169 21 122 22.5 20.5 21.5 0.9 185 chr3R 6552984 intron dpr11 - chr3R 6553076 intron dpr11 - chr3R 6553169 intron dpr11 - chr3R_21_6550001 chr3R_6550001 RAL-853_125b 2827 chr3R 6560718 6560780 chr3R 6560884 6560962 20 179 17.0 14.5 15.8 1.2 244 chr3R 6560718 intron dpr11 - chr3R 6560840 intron dpr11 - chr3R 6560962 intron dpr11 - chr3R_20_6560001 chr3R_6560001 RAL-853_125b 2828 chr3R 6561916 6561972 chr3R 6562050 6562106 7 134 22.0 20.5 21.2 0.3 190 chr3R 6561916 intron dpr11 - chr3R 6562011 intron dpr11 - chr3R 6562106 intron dpr11 - chr3R_7_6560001 chr3R_6560001 RAL-853_125b 2829 chr3R 6616826 6616891 chr3R 6616953 6617018 24 127 20.0 21.5 20.8 1.1 192 chr3R 6616826 intergenic not near genes chr3R 6616922 intergenic not near genes chr3R 6617018 intergenic not near genes chr3R_24_6615001 chr3R_6615001 RAL-853_125b 2830 chr3R 6639864 6639932 chr3R 6639992 6640064 18 130 10.5 3.5 7.0 2.2 200 chr3R 6639864 intergenic not near genes chr3R 6639964 intergenic not near genes chr3R 6640064 intergenic not near genes chr3R_18_6635001 chr3R_6635001 RAL-853_125b 2831 chr3R 6689297 6689334 chr3R 6689429 6689466 6 132 25.5 19.0 22.2 0.3 169 chr3R 6689297 intergenic Ccp84Af - chr3R 6689382 intergenic Ccp84Af - chr3R 6689466 intergenic Ccp84Af - chr3R_6_6685001 chr3R_6685001 RAL-853_125b 2832 chr3R 6693601 6693665 chr3R 6693738 6693802 6 132 13.5 12.0 12.8 0.4 201 chr3R 6693601 intergenic Ccp84Ad + chr3R 6693702 intergenic Ccp84Ad + chr3R 6693802 intergenic Ccp84Ad + chr3R_6_6690001 chr3R_6690001 RAL-853_125b 2833 chr3R 6697269 6697310 chr3R 6697405 6697446 15 136 14.0 16.0 15.0 0.9 177 chr3R 6697269 intergenic not near genes chr3R 6697358 intergenic not near genes chr3R 6697446 intergenic not near genes chr3R_15_6695001 chr3R_6695001 RAL-853_125b 2834 chr3R 6705627 6705701 chr3R 6705908 6705975 18 276 0.0 5.0 2.5 5.1 348 chr3R 6705627 intergenic not near genes chr3R 6705801 intergenic not near genes chr3R 6705975 intergenic not near genes chr3R_18_6705001 chr3R_6705001 RAL-853_125b 2835 chr3R 6725127 6725189 chr3R 6725312 6725370 10 185 22.0 22.0 22.0 0.4 243 chr3R 6725127 intron pb - chr3R 6725248 intron pb - chr3R 6725370 intron pb - chr3R_10_6725001 chr3R_6725001 RAL-853_125b 2836 chr3R 6725811 6725860 chr3R 6725947 6725996 22 136 22.0 24.5 23.2 0.9 185 chr3R 6725811 intron pb - chr3R 6725904 intron pb - chr3R 6725996 intron pb - chr3R_22_6725001 chr3R_6725001 RAL-853_125b 2837 chr3R 6737457 6737472 chr3R 6739294 6739309 Doc 5 1834 21.0 12.0 16.5 0.3 1852 chr3R 6737457 intron pb - chr3R 6738383 intron pb - chr3R 6739309 intron pb - chr3R_5_6735001 chr3R_6735001 RAL-853_125b 2838 chr3R 6737474 6737486 chr3R 6739291 6739306 Doc 6 1826 18.0 12.0 15.0 0.4 1832 chr3R 6737474 intron pb - chr3R 6738390 intron pb - chr3R 6739306 intron pb - chr3R_6_6735001 chr3R_6735001 RAL-853_125b 2839 chr3R 6737492 6737525 chr3R 6739290 6739337 Doc 18 1831 7.0 12.0 9.5 1.7 1845 chr3R 6737492 intron pb - chr3R 6738414 intron pb - chr3R 6739337 intron pb - chr3R_18_6735001 chr3R_6735001 RAL-853_125b 2840 chr3R 6759550 6759621 chr3R 6759677 6759721 5 122 12.5 13.5 13.0 0.4 171 chr3R 6759550 intergenic bcd - chr3R 6759636 intergenic bcd - chr3R 6759721 intergenic bcd - chr3R_5_6755001 chr3R_6755001 RAL-853_125b 2841 chr3R 6804160 6804221 chr3R 6804319 6804377 13 155 8.0 13.5 10.8 1.1 217 chr3R 6804160 intergenic not near genes chr3R 6804268 intergenic not near genes chr3R 6804377 intergenic not near genes chr3R_13_6800001 chr3R_6800001 RAL-853_125b 2842 chr3R 6827978 6828033 chr3R 6828104 6828159 6 126 21.5 23.0 22.2 0.3 181 chr3R 6827978 intron Scr - chr3R 6828068 intron Scr - chr3R 6828159 intron Scr - chr3R_6_6825001 chr3R_6825001 RAL-853_125b 2843 chr3R 6856336 6856399 chr3R 6856503 6856566 16 167 5.0 3.5 4.2 3.1 230 chr3R 6856336 intergenic not near genes chr3R 6856451 intergenic not near genes chr3R 6856566 intergenic not near genes chr3R_16_6855001 chr3R_6855001 RAL-853_125b 2844 chr3R 6862174 6862241 chr3R 6862311 6862378 16 137 10.0 6.0 8.0 1.8 204 chr3R 6862174 intergenic not near genes chr3R 6862276 intergenic not near genes chr3R 6862378 intergenic not near genes chr3R_16_6860001 chr3R_6860001 RAL-853_125b 2845 chr3R 6912055 6912129 chr3R 6912216 6912290 9 161 29.0 29.5 29.2 0.3 235 chr3R 6912055 intron Antp - chr3R 6912172 intron Antp - chr3R 6912290 intron Antp - chr3R_9_6910001 chr3R_6910001 RAL-853_125b 2846 chr3R 6914694 6914753 chr3R 6914845 6914904 21 150 13.5 11.5 12.5 1.6 210 chr3R 6914694 intron Antp - chr3R 6914799 intron Antp - chr3R 6914904 intron Antp - chr3R_21_6910001 chr3R_6910001 RAL-853_125b 2847 chr3R 6936591 6936600 chr3R 6936928 6936937 7 336 19.5 12.5 16.0 0.4 346 chr3R 6936591 intron Antp - chr3R 6936764 intron Antp - chr3R 6936937 intron Antp - chr3R_7_6935001 chr3R_6935001 RAL-853_125b 2848 chr3R 6936601 6936663 chr3R 6936926 6937000 18 331 12.5 12.0 12.2 1.4 399 chr3R 6936601 intron Antp - chr3R 6936800 intron Antp - chr3R 6937000 intron Antp - chr3R_18_6935001 chr3R_6935001 RAL-853_125b 2849 chr3R 6958880 6958905 chr3R 6959141 6959166 15 260 9.5 12.0 10.8 1.3 286 chr3R 6958880 intron Antp - chr3R 6959023 intron Antp - chr3R 6959166 intron Antp - chr3R_15_6955001 chr3R_6955001 RAL-853_125b 2850 chr3R 6958912 6958951 chr3R 6959136 6959212 15 258 8.5 11.0 9.8 1.4 300 chr3R 6958912 intron Antp - chr3R 6959062 intron Antp - chr3R 6959212 intron Antp - chr3R_15_6955001 chr3R_6955001 RAL-853_125b 2851 chr3R 6961144 6961190 chr3R 6961273 6961319 15 126 7.0 12.0 9.5 1.4 175 chr3R 6961144 intron Antp - chr3R 6961232 intron Antp - chr3R 6961319 intron Antp - chr3R_15_6960001 chr3R_6960001 RAL-853_125b 2852 chr3R 7024757 7024822 chr3R 7024899 7024958 16 135 9.5 11.0 10.2 1.4 201 chr3R 7024757 intergenic not near genes chr3R 7024858 intergenic not near genes chr3R 7024958 intergenic not near genes chr3R_16_7020001 chr3R_7020001 RAL-853_125b 2853 chr3R 7026825 7026863 chr3R 7026959 7026999 6 136 26.0 21.5 23.8 0.2 174 chr3R 7026825 intergenic not near genes chr3R 7026912 intergenic not near genes chr3R 7026999 intergenic not near genes chr3R_6_7025001 chr3R_7025001 RAL-853_125b 2854 chr3R 7092754 7092809 chr3R 7093367 7093423 11 612 29.5 33.5 31.5 0.3 669 chr3R 7092754 3` UTR CR43685 - chr3R 7093088 intron CR43685 - chr3R 7093423 3` UTR CR43685 - chr3R_11_7090001 chr3R_7090001 RAL-853_125b 2855 chr3R 7103234 7103317 chr3R 7103360 7103385 15 108 6.5 9.0 7.8 1.7 151 chr3R 7103234 intron Alh - chr3R 7103310 intron Alh - chr3R 7103385 intron Alh - chr3R_15_7100001 chr3R_7100001 RAL-853_125b 2856 chr3R 7103863 7103907 chr3R 7104001 7104045 8 134 19.5 16.0 17.8 0.4 182 chr3R 7103863 intron Alh - chr3R 7103954 intron Alh - chr3R 7104045 intron Alh - chr3R_8_7100001 chr3R_7100001 RAL-853_125b 2857 chr3R 7126468 7126529 chr3R 7126613 7126674 18 145 8.0 7.5 7.8 2.0 206 chr3R 7126468 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126571 3` UTR CG10068 - chr3R 7126674 3` UTR CG10068 - chr3R_18_7125001 chr3R_7125001 RAL-853_125b 2858 chr3R 7173634 7173696 chr3R 7173763 7173826 19 130 4.5 7.5 6.0 2.7 192 chr3R 7173634 intron sas + chr3R 7173730 intron sas + chr3R 7173826 intron sas + chr3R_19_7170001 chr3R_7170001 RAL-853_125b 2859 chr3R 7206847 7206902 chr3R 7206983 7207016 10 134 29.5 31.5 30.5 0.3 169 chr3R 7206847 intergenic not near genes chr3R 7206932 intergenic CG1288 - chr3R 7207016 intergenic CG1288 - chr3R_10_7205001 chr3R_7205001 RAL-853_125b 2860 chr3R 7210545 7210608 chr3R 7210671 7210744 11 129 12.0 15.0 13.5 0.8 199 chr3R 7210545 intergenic not near genes chr3R 7210644 intergenic not near genes chr3R 7210744 intergenic not near genes chr3R_11_7210001 chr3R_7210001 RAL-853_125b 2861 chr3R 7217423 7217475 chr3R 7217694 7217746 14 269 12.5 17.0 14.8 0.9 323 chr3R 7217423 intergenic CG14605 -,CG14606 - chr3R 7217584 intergenic CG14605 - chr3R 7217746 exon CG14605 - chr3R_14_7215001 chr3R_7215001 RAL-853_125b 2862 chr3R 7252359 7252417 chr3R 7252496 7252554 18 137 13.0 13.0 13.0 1.3 195 chr3R 7252359 3` UTR Gld - chr3R 7252456 3` UTR Gld - chr3R 7252554 3` UTR Gld - chr3R_18_7250001 chr3R_7250001 RAL-853_125b 2863 chr3R 7363689 7363734 chr3R 7364112 7364157 14 423 12.0 15.5 13.8 0.9 468 chr3R 7363689 intron Mst84Dd - chr3R 7363923 intergenic Mst84Dd -,Mst84Dc - chr3R 7364157 intergenic Mst84Dc -,Mst84Dd - chr3R_14_7360001 chr3R_7360001 RAL-853_125b 2864 chr3R 7372952 7373021 chr3R 7373081 7373130 5 123 37.0 36.5 36.8 0.1 178 chr3R 7372952 intergenic not near genes chr3R 7373041 intergenic not near genes chr3R 7373130 intergenic not near genes chr3R_5_7370001 chr3R_7370001 RAL-853_125b 2865 chr3R 7385545 7385612 chr3R 7385665 7385698 7 98 23.0 26.0 24.5 0.3 153 chr3R 7385545 intergenic not near genes chr3R 7385622 intergenic not near genes chr3R 7385698 intergenic not near genes chr3R_7_7385001 chr3R_7385001 RAL-853_125b 2866 chr3R 7405682 7405737 chr3R 7405804 7405867 21 127 19.5 17.0 18.2 1.1 185 chr3R 7405682 intergenic not near genes chr3R 7405774 intergenic not near genes chr3R 7405867 intergenic not near genes chr3R_21_7405001 chr3R_7405001 RAL-853_125b 2867 chr3R 7419836 7419902 chr3R 7419984 7420050 28 146 18.5 17.0 17.8 1.5 214 chr3R 7419836 exon CG31544 + chr3R 7419943 exon CG31544 + chr3R 7420050 exon CG31544 + chr3R_28_7415001 chr3R_7415001 RAL-853_125b 2868 chr3R 7443850 7443863 chr3R 7444373 7444386 5 523 17.5 18.5 18.0 0.3 536 chr3R 7443850 intergenic not near genes chr3R 7444118 intergenic not near genes chr3R 7444386 intergenic not near genes chr3R_5_7440001 chr3R_7440001 RAL-853_125b 2869 chr3R 7443874 7443905 chr3R 7444397 7444428 9 522 15.5 23.5 19.5 0.4 554 chr3R 7443874 intergenic not near genes chr3R 7444151 intergenic not near genes chr3R 7444428 intergenic not near genes chr3R_9_7440001 chr3R_7440001 RAL-853_125b 2870 chr3R 7447949 7448003 chr3R 7448077 7448131 18 128 9.5 8.0 8.8 1.8 182 chr3R 7447949 intergenic not near genes chr3R 7448040 intergenic not near genes chr3R 7448131 intergenic not near genes chr3R_18_7445001 chr3R_7445001 RAL-853_125b 2871 chr3R 7464646 7464704 chr3R 7464782 7464840 10 136 24.0 19.5 21.8 0.4 194 chr3R 7464646 intergenic not near genes chr3R 7464743 intergenic not near genes chr3R 7464840 intergenic not near genes chr3R_10_7460001 chr3R_7460001 RAL-853_125b 2872 chr3R 7465232 7465303 chr3R 7465424 7465495 16 192 24.5 20.5 22.5 0.7 263 chr3R 7465232 intergenic not near genes chr3R 7465364 intergenic not near genes chr3R 7465495 intergenic not near genes chr3R_16_7465001 chr3R_7465001 RAL-853_125b 2873 chr3R 7508978 7509008 chr3R 7511268 7511298 10 2290 66.0 49.5 57.8 0.2 2320 chr3R 7508978 intergenic alpha-Est8 - chr3R 7510138 exon alpha-Est8 - chr3R 7511298 exon alpha-Est8 - chr3R_10_7510001 chr3R_7510001 RAL-853_125b 2874 chr3R 7511719 7511786 chr3R 7511850 7511917 15 129 9.0 9.5 9.2 1.5 198 chr3R 7511719 intron alpha-Est8 - chr3R 7511818 intron alpha-Est8 - chr3R 7511917 exon alpha-Est8 - chr3R_15_7510001 chr3R_7510001 RAL-853_125b 2875 chr3R 7552930 7552982 chr3R 7553068 7553120 8 138 19.5 17.0 18.2 0.4 190 chr3R 7552930 intergenic not near genes chr3R 7553025 intergenic not near genes chr3R 7553120 intergenic not near genes chr3R_8_7550001 chr3R_7550001 RAL-853_125b 2876 chr3R 7574595 7574651 chr3R 7574727 7574775 9 128 8.5 11.0 9.8 0.8 180 chr3R 7574595 intron CG34127 - chr3R 7574685 intron CG34127 - chr3R 7574775 intron CG34127 - chr3R_9_7570001 chr3R_7570001 RAL-853_125b 2877 chr3R 7621482 7621556 chr3R 7621622 7621696 9 139 12.5 13.5 13.0 0.6 214 chr3R 7621482 intron CG34127 - chr3R 7621589 intron CG34127 - chr3R 7621696 intron CG34127 - chr3R_9_7620001 chr3R_7620001 RAL-853_125b 2878 chr3R 7677874 7677941 chr3R 7678032 7678104 19 152 0.5 4.0 2.2 5.9 230 chr3R 7677874 intron Nlg1 + chr3R 7677989 intron Nlg1 + chr3R 7678104 intron Nlg1 + chr3R_19_7675001 chr3R_7675001 RAL-853_125b 2879 chr3R 7694539 7694610 chr3R 7713650 7713709 invader3 16 19110 6.0 6.5 6.2 2.2 19170 chr3R 7694539 3` UTR Nlg1 + chr3R 7704124 intergenic not near genes chr3R 7713709 intergenic not near genes chr3R_16_7700001 chr3R_7700001 RAL-853_125b 2880 chr3R 7729425 7729488 chr3R 7737413 7737476 Stalker2 29 7988 7.0 6.5 6.8 3.7 8051 chr3R 7729425 intergenic not near genes chr3R 7733450 intergenic not near genes chr3R 7737476 intergenic not near genes chr3R_29_7730001 chr3R_7730001 RAL-853_125b 2881 chr3R 7766501 7766555 chr3R 7767252 7767266 16 748 14.5 14.5 14.5 1.0 765 chr3R 7766501 intergenic not near genes chr3R 7766884 intergenic not near genes chr3R 7767266 intergenic not near genes chr3R_16_7765001 chr3R_7765001 RAL-853_125b 2882 chr3R 7772224 7772295 chr3R 7772522 7772592 10 297 28.5 24.0 26.2 0.4 368 chr3R 7772224 intergenic CG11286 - chr3R 7772408 intergenic not near genes chr3R 7772592 intergenic not near genes chr3R_10_7770001 chr3R_7770001 RAL-853_125b 2883 chr3R 7818473 7818510 chr3R 7818603 7818647 11 131 22.5 18.0 20.2 0.5 174 chr3R 7818473 intron CG34384 + chr3R 7818560 intron CG34384 + chr3R 7818647 intron CG34384 + chr3R_11_7815001 chr3R_7815001 RAL-853_125b 2884 chr3R 7818513 7818538 chr3R 7818599 7818663 9 121 18.5 17.5 18.0 0.5 150 chr3R 7818513 intron CG34384 + chr3R 7818588 intron CG34384 + chr3R 7818663 intron CG34384 + chr3R_9_7815001 chr3R_7815001 RAL-853_125b 2885 chr3R 7824046 7824106 chr3R 7824173 7824232 10 127 11.0 13.0 12.0 0.8 186 chr3R 7824046 intron CG34384 + chr3R 7824139 intron CG34384 + chr3R 7824232 intron CG34384 + chr3R_10_7820001 chr3R_7820001 RAL-853_125b 2886 chr3R 7832835 7832871 chr3R 7833065 7833101 14 229 18.5 19.0 18.8 0.7 266 chr3R 7832835 intron CG34384 + chr3R 7832968 intron CG34384 + chr3R 7833101 intron CG34384 + chr3R_14_7830001 chr3R_7830001 RAL-853_125b 2887 chr3R 7897325 7897384 chr3R 7897484 7897543 12 159 11.5 10.5 11.0 1.0 218 chr3R 7897325 intron,intron mRpS9 -,wtrw + chr3R 7897434 intron,intron mRpS9 -,wtrw + chr3R 7897543 intron,intron mRpS9 -,wtrw + chr3R_12_7895001 chr3R_7895001 RAL-853_125b 2888 chr3R 7941809 7941874 chr3R 7941963 7942028 22 153 15.0 13.5 14.2 1.4 219 chr3R 7941809 intron dsx - chr3R 7941918 intron dsx - chr3R 7942028 intron dsx - chr3R_22_7940001 chr3R_7940001 RAL-853_125b 2889 chr3R 7953619 7953686 chr3R 7953756 7953823 10 137 29.5 24.5 27.0 0.4 204 chr3R 7953619 intron dsx - chr3R 7953721 intron dsx - chr3R 7953823 intron dsx - chr3R_10_7950001 chr3R_7950001 RAL-853_125b 2890 chr3R 7956582 7956658 chr3R 7956725 7956801 8 142 23.0 23.5 23.2 0.3 219 chr3R 7956582 intron dsx - chr3R 7956692 intron dsx - chr3R 7956801 intron dsx - chr3R_8_7955001 chr3R_7955001 RAL-853_125b 2891 chr3R 7973278 7973325 chr3R 7974390 7974437 1360 20 1112 8.0 9.5 8.8 2.0 1159 chr3R 7973278 intergenic not near genes chr3R 7973858 intergenic not near genes chr3R 7974437 3` UTR CD98hc - chr3R_20_7970001 chr3R_7970001 RAL-853_125b 2892 chr3R 8049021 8049026 chr3R 8049645 8049650 4 624 9.5 9.5 9.5 0.4 629 chr3R 8049021 intron CG43060 + chr3R 8049336 intron,intron CG43060 +,CG43618 + chr3R 8049650 intron CG43060 + chr3R_4_8045001 chr3R_8045001 RAL-853_125b 2893 chr3R 8049028 8049043 chr3R 8049634 8049662 5 619 10.5 9.5 10.0 0.5 634 chr3R 8049028 intron CG43060 + chr3R 8049345 intron,intron CG43060 +,CG43618 + chr3R 8049662 intron CG43060 + chr3R_5_8045001 chr3R_8045001 RAL-853_125b 2894 chr3R 8049345 8049386 chr3R 8049583 8049624 7 238 2.5 6.0 4.2 1.3 279 chr3R 8049345 intron,intron CG43060 +,CG43618 + chr3R 8049484 intron CG43060 + chr3R 8049624 intron CG43060 + chr3R_7_8045001 chr3R_8045001 RAL-853_125b 2895 chr3R 8070862 8070915 chr3R 8070993 8071037 13 130 12.0 13.5 12.8 0.9 175 chr3R 8070862 intron mAChR-B + chr3R 8070950 intron mAChR-B + chr3R 8071037 intron mAChR-B + chr3R_13_8070001 chr3R_8070001 RAL-853_125b 2896 chr3R 8076009 8076052 chr3R 8076240 8076277 5 230 22.5 20.0 21.2 0.2 268 chr3R 8076009 intron mAChR-B + chr3R 8076143 intron mAChR-B + chr3R 8076277 intron mAChR-B + chr3R_5_8075001 chr3R_8075001 RAL-853_125b 2897 chr3R 8076056 8076059 chr3R 8076225 8076290 4 216 22.5 18.5 20.5 0.2 234 chr3R 8076056 intron mAChR-B + chr3R 8076173 intron mAChR-B + chr3R 8076290 intron mAChR-B + chr3R_4_8075001 chr3R_8075001 RAL-853_125b 2898 chr3R 8081107 8081175 chr3R 8081235 8081303 12 122 13.0 15.5 14.2 0.8 196 chr3R 8081107 intron mAChR-B + chr3R 8081205 intron mAChR-B + chr3R 8081303 intron mAChR-B + chr3R_12_8080001 chr3R_8080001 RAL-853_125b 2899 chr3R 8090222 8090298 chr3R 8090449 8090525 35 227 7.5 8.0 7.8 4.0 303 chr3R 8090222 5` UTR CR44330 + chr3R 8090374 intergenic CR44330 + chr3R 8090525 intergenic CR44330 + chr3R_35_8090001 chr3R_8090001 RAL-853_125b 2900 chr3R 8090516 8090556 chr3R 8094043 8094083 297 14 3526 8.0 15.0 11.5 1.1 3567 chr3R 8090516 intergenic CR44330 + chr3R 8092300 intergenic not near genes chr3R 8094083 intergenic CG7900 + chr3R_14_8090001 chr3R_8090001 RAL-853_125b 2901 chr3R 8094367 8094428 chr3R 8099722 8099783 Transpac 24 5355 11.5 5.0 8.2 2.6 5416 chr3R 8094367 intron CG7900 + chr3R 8097075 intron CG7900 + chr3R 8099783 intron CG7900 + chr3R_24_8095001 chr3R_8095001 RAL-853_125b 2902 chr3R 8101725 8101738 chr3R 8104849 8104868 G2 5 3131 19.5 5.0 12.2 0.4 3143 chr3R 8101725 exon CG7900 + chr3R 8103296 intron CG7900 + chr3R 8104868 3` UTR CG7900 + chr3R_5_8100001 chr3R_8100001 RAL-853_125b 2903 chr3R 8101739 8101774 chr3R 8104848 8104908 G2 12 3130 13.0 5.0 9.0 1.2 3169 chr3R 8101739 exon CG7900 + chr3R 8103324 intron CG7900 + chr3R 8104908 3` UTR CG7900 + chr3R_12_8100001 chr3R_8100001 RAL-853_125b 2904 chr3R 8107344 8107411 chr3R 8107528 8107595 25 184 10.5 6.5 8.5 2.6 251 chr3R 8107344 intron puc + chr3R 8107470 intron puc + chr3R 8107595 intron puc + chr3R_25_8105001 chr3R_8105001 RAL-853_125b 2905 chr3R 8207515 8207580 chr3R 8208410 8208474 F-element 25 890 6.0 7.5 6.8 3.2 959 chr3R 8207515 intergenic not near genes chr3R 8207994 intergenic not near genes chr3R 8208474 intergenic not near genes chr3R_25_8205001 chr3R_8205001 RAL-853_125b 2906 chr3R 8212962 8213021 chr3R 8213094 8213154 13 128 21.0 9.5 15.2 0.8 192 chr3R 8212962 intergenic not near genes chr3R 8213058 intergenic not near genes chr3R 8213154 intergenic not near genes chr3R_13_8210001 chr3R_8210001 RAL-853_125b 2907 chr3R 8247853 8247914 chr3R 8247985 8248046 15 132 27.0 26.5 26.8 0.5 193 chr3R 8247853 3` UTR,3` UTR CG18749 +,CG33722 + chr3R 8247950 intron,intron CG18749 +,CG33722 + chr3R 8248046 3` UTR,3` UTR CG18749 +,CG33722 + chr3R_15_8245001 chr3R_8245001 RAL-853_125b 2908 chr3R 8255465 8255538 chr3R 8255604 8255650 19 132 15.5 23.5 19.5 0.9 185 chr3R 8255465 intron mtg + chr3R 8255558 intron mtg + chr3R 8255650 intron mtg + chr3R_19_8255001 chr3R_8255001 RAL-853_125b 2909 chr3R 8273702 8273753 chr3R 8273839 8273890 9 137 18.0 20.5 19.2 0.4 188 chr3R 8273702 intergenic not near genes chr3R 8273796 intergenic not near genes chr3R 8273890 intergenic not near genes chr3R_9_8270001 chr3R_8270001 RAL-853_125b 2910 chr3R 8287385 8287387 chr3R 22081601 22081601 5 13794216 35.0 3.0 19.0 0.2 13794216 chr3R 8287385 intron CR44318 + chr3R 15184493 intron Gyc88E + chr3R 22081601 intron CG13408 + chr3R_5_15180001 chr3R_15180001 RAL-853_125b 2911 chr3R 8339241 8339247 chr3R 21907534 21907536 20 13568289 41.0 37.5 39.2 0.5 13568295 chr3R 8339241 intergenic not near genes chr3R 15123388 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_20_15120001 chr3R_15120001 RAL-853_125b 2912 chr3R 8402975 8403029 chr3R 8412176 8412245 roo 23 9212 13.5 7.5 10.5 2.0 9270 chr3R 8402975 intron CG45263 - chr3R 8407610 intron CG45263 - chr3R 8412245 intron CG45263 - chr3R_23_8405001 chr3R_8405001 RAL-853_125b 2913 chr3R 8460211 8460263 chr3R 8460337 8460390 5 126 13.0 20.0 16.5 0.3 179 chr3R 8460211 intron CG45263 - chr3R 8460300 intron CG45263 - chr3R 8460390 intron CG45263 - chr3R_5_8460001 chr3R_8460001 RAL-853_125b 2914 chr3R 8552324 8552394 chr3R 8552454 8552524 13 129 26.5 25.5 26.0 0.5 200 chr3R 8552324 intergenic Or85d + chr3R 8552424 intergenic Or85d + chr3R 8552524 intergenic Or85d + chr3R_13_8550001 chr3R_8550001 RAL-853_125b 2915 chr3R 8555509 8555558 chr3R 8555711 8555780 9 218 26.5 22.0 24.2 0.4 271 chr3R 8555509 intergenic not near genes chr3R 8555644 intergenic not near genes chr3R 8555780 intergenic not near genes chr3R_9_8555001 chr3R_8555001 RAL-853_125b 2916 chr3R 8570448 8570464 chr3R 8575134 8575149 HMS-Beagle 5 4685 18.5 14.5 16.5 0.3 4701 chr3R 8570448 intergenic not near genes chr3R 8572798 intergenic not near genes chr3R 8575149 intergenic not near genes chr3R_5_8570001 chr3R_8570001 RAL-853_125b 2917 chr3R 8570471 8570502 chr3R 8575125 8575186 HMS-Beagle 13 4680 7.0 12.5 9.8 1.2 4715 chr3R 8570471 intergenic not near genes chr3R 8572828 intergenic not near genes chr3R 8575186 intergenic not near genes chr3R_13_8570001 chr3R_8570001 RAL-853_125b 2918 chr3R 8575884 8575948 chr3R 8576017 8576081 16 132 22.5 16.5 19.5 0.8 197 chr3R 8575884 intergenic not near genes chr3R 8575982 intergenic not near genes chr3R 8576081 intergenic not near genes chr3R_16_8575001 chr3R_8575001 RAL-853_125b 2919 chr3R 8601731 8601770 chr3R 8610934 8610972 roo 14 9202 12.0 7.5 9.8 1.3 9241 chr3R 8601731 intron 5-HT2B + chr3R 8606352 intron 5-HT2B + chr3R 8610972 intron 5-HT2B + chr3R_14_8605001 chr3R_8605001 RAL-853_125b 2920 chr3R 8601773 8601797 chr3R 8610924 8610977 roo 4 9184 5.0 7.0 6.0 0.6 9204 chr3R 8601773 intron 5-HT2B + chr3R 8606375 intron 5-HT2B + chr3R 8610977 intron 5-HT2B + chr3R_4_8605001 chr3R_8605001 RAL-853_125b 2921 chr3R 8614758 8614806 chr3R 8615003 8615059 5 241 3.5 16.0 9.8 0.5 301 chr3R 8614758 intron 5-HT2B + chr3R 8614908 intron 5-HT2B + chr3R 8615059 intron 5-HT2B + chr3R_5_8610001 chr3R_8610001 RAL-853_125b 2922 chr3R 8685246 8685312 chr3R 8685396 8685462 20 149 8.0 8.0 8.0 2.2 216 chr3R 8685246 intron CR44937 - chr3R 8685354 intron CR44937 - chr3R 8685462 intron CR44937 - chr3R_20_8685001 chr3R_8685001 RAL-853_125b 2923 chr3R 8707311 8707375 chr3R 8709802 8709866 jockey 14 2489 13.5 5.5 9.5 1.3 2555 chr3R 8707311 intergenic not near genes chr3R 8708588 intergenic not near genes chr3R 8709866 intergenic not near genes chr3R_14_8705001 chr3R_8705001 RAL-853_125b 2924 chr3R 8730821 8730896 chr3R 8730952 8731003 10 118 43.5 42.5 43.0 0.2 182 chr3R 8730821 exon M1BP - chr3R 8730912 exon M1BP - chr3R 8731003 exon M1BP - chr3R_10_8730001 chr3R_8730001 RAL-853_125b 2925 chr3R 8760560 8760612 chr3R 8760685 8760722 7 121 23.5 25.5 24.5 0.3 162 chr3R 8760560 intron,intron CG11768 -,CG34135 - chr3R 8760641 intron,intron CG11768 -,CG34135 - chr3R 8760722 intron,intron CG11768 -,CG34135 - chr3R_7_8760001 chr3R_8760001 RAL-853_125b 2926 chr3R 8798604 8798676 chr3R 8798738 8798809 12 131 27.5 27.5 27.5 0.4 205 chr3R 8798604 intron,intron Pif1A -,Pif1B - chr3R 8798706 intron,intron Pif1A -,Pif1B - chr3R 8798809 intron,intron Pif1A -,Pif1B - chr3R_12_8795001 chr3R_8795001 RAL-853_125b 2927 chr3R 8868759 8868785 chr3R 8872653 8872679 297 4 3894 7.0 4.5 5.8 0.6 3920 chr3R 8868759 intron pyd - chr3R 8870719 intron pyd - chr3R 8872679 intron pyd - chr3R_4_8870001 chr3R_8870001 RAL-853_125b 2928 chr3R 8882015 8882087 chr3R 8882156 8882228 13 139 22.5 19.0 20.8 0.6 213 chr3R 8882015 intron pyd - chr3R 8882122 intron pyd - chr3R 8882228 intron pyd - chr3R_13_8880001 chr3R_8880001 RAL-853_125b 2929 chr3R 8894831 8894894 chr3R 8896037 8896100 1360 19 1206 13.0 19.0 16.0 1.1 1269 chr3R 8894831 intron pyd - chr3R 8895466 intron pyd - chr3R 8896100 intron pyd - chr3R_19_8895001 chr3R_8895001 RAL-853_125b 2930 chr3R 8898185 8898210 chr3R 8913808 8913840 297 5 15626 10.5 6.0 8.2 0.5 15655 chr3R 8898185 intron pyd - chr3R 8906012 intron pyd - chr3R 8913840 intron pyd - chr3R_5_8905001 chr3R_8905001 RAL-853_125b 2931 chr3R 8917846 8917912 chr3R 8917976 8918037 10 129 24.0 25.0 24.5 0.4 191 chr3R 8917846 intron pyd - chr3R 8917942 intron pyd - chr3R 8918037 intron pyd - chr3R_10_8915001 chr3R_8915001 RAL-853_125b 2932 chr3R 8918173 8918227 chr3R 8918315 8918369 8 142 31.0 29.0 30.0 0.3 196 chr3R 8918173 intron pyd - chr3R 8918271 intron pyd - chr3R 8918369 intron pyd - chr3R_8_8915001 chr3R_8915001 RAL-853_125b 2933 chr3R 8993374 8993435 chr3R 8993505 8993566 5 126 23.0 27.0 25.0 0.2 192 chr3R 8993374 5` UTR CG11975 + chr3R 8993470 intron CG11975 + chr3R 8993566 exon CG11975 + chr3R_5_8990001 chr3R_8990001 RAL-853_125b 2934 chr3R 9036668 9036738 chr3R 9036814 9036884 8 146 17.5 22.0 19.8 0.4 216 chr3R 9036668 intron neur - chr3R 9036776 intron neur - chr3R 9036884 intron neur - chr3R_8_9035001 chr3R_9035001 RAL-853_125b 2935 chr3R 9043977 9044044 chr3R 9044104 9044171 20 127 13.0 15.0 14.0 1.3 194 chr3R 9043977 intron Nmdmc - chr3R 9044074 intron Nmdmc - chr3R 9044171 intron Nmdmc - chr3R_20_9040001 chr3R_9040001 RAL-853_125b 2936 chr3R 9056831 9056903 chr3R 9056993 9057065 29 162 15.5 20.5 18.0 1.5 234 chr3R 9056831 intron Kdm2 + chr3R 9056948 intron Kdm2 + chr3R 9057065 intron Kdm2 + chr3R_29_9055001 chr3R_9055001 RAL-853_125b 2937 chr3R 9078308 9078328 chr3R 9078476 9078496 5 168 20.0 15.0 17.5 0.3 188 chr3R 9078308 intron pum - chr3R 9078402 intron pum - chr3R 9078496 intron pum - chr3R_5_9075001 chr3R_9075001 RAL-853_125b 2938 chr3R 9083096 9083105 chr3R 9083231 9083235 8 134 30.0 22.5 26.2 0.3 139 chr3R 9083096 intron pum - chr3R 9083166 intron pum - chr3R 9083235 intron pum - chr3R_8_9080001 chr3R_9080001 RAL-853_125b 2939 chr3R 9083106 9083171 chr3R 9083228 9083306 23 133 21.0 22.0 21.5 1.0 200 chr3R 9083106 intron pum - chr3R 9083206 intron pum - chr3R 9083306 intron pum - chr3R_23_9080001 chr3R_9080001 RAL-853_125b 2940 chr3R 9101801 9101862 chr3R 9101948 9102010 31 147 6.5 6.5 6.5 4.1 209 chr3R 9101801 intron pum - chr3R 9101906 intron pum - chr3R 9102010 intron pum - chr3R_31_9100001 chr3R_9100001 RAL-853_125b 2941 chr3R 9108817 9108884 chr3R 9108943 9109010 25 126 7.0 9.0 8.0 2.8 193 chr3R 9108817 intron pum - chr3R 9108914 intron pum - chr3R 9109010 intron pum - chr3R_25_9105001 chr3R_9105001 RAL-853_125b 2942 chr3R 9141098 9141111 chr3R 9141232 9141245 6 134 30.5 19.5 25.0 0.2 147 chr3R 9141098 intron pum - chr3R 9141172 intron pum - chr3R 9141245 intron pum - chr3R_6_9140001 chr3R_9140001 RAL-853_125b 2943 chr3R 9141112 9141160 chr3R 9141231 9141294 16 131 20.5 19.0 19.8 0.8 182 chr3R 9141112 intron pum - chr3R 9141203 intron pum - chr3R 9141294 intron pum - chr3R_16_9140001 chr3R_9140001 RAL-853_125b 2944 chr3R 9192014 9192039 chr3R 9192149 9192174 7 135 20.0 24.5 22.2 0.3 160 chr3R 9192014 intron pum - chr3R 9192094 intron pum - chr3R 9192174 intron pum - chr3R_7_9190001 chr3R_9190001 RAL-853_125b 2945 chr3R 9204198 9204272 chr3R 9204335 9204409 36 134 12.0 7.0 9.5 3.4 211 chr3R 9204198 intron pum - chr3R 9204304 intron pum - chr3R 9204409 intron pum - chr3R_36_9200001 chr3R_9200001 RAL-853_125b 2946 chr3R 9278773 9278800 chr3R 9284083 9284110 Rt1a 10 5310 1.5 24.0 12.8 0.7 5337 chr3R 9278773 intergenic not near genes chr3R 9281442 intergenic not near genes chr3R 9284110 intergenic not near genes chr3R_10_9280001 chr3R_9280001 RAL-853_125b 2947 chr3R 9319533 9319597 chr3R 9320018 9320082 jockey 31 485 8.5 13.0 10.8 2.6 549 chr3R 9319533 intron CG8861 - chr3R 9319808 intron CG8861 - chr3R 9320082 intron CG8861 - chr3R_31_9315001 chr3R_9315001 RAL-853_125b 2948 chr3R 9350472 9350523 chr3R 9350603 9350654 16 131 15.0 18.0 16.5 0.9 182 chr3R 9350472 intron CG45050 + chr3R 9350563 intron CG45050 + chr3R 9350654 intron CG45050 + chr3R_16_9350001 chr3R_9350001 RAL-853_125b 2949 chr3R 9361805 9361837 chr3R 9362096 9362128 pogo 12 291 4.5 11.0 7.8 1.4 323 chr3R 9361805 3` UTR CG45050 + chr3R 9361966 3` UTR CG45050 + chr3R 9362128 3` UTR CG45050 + chr3R_12_9360001 chr3R_9360001 RAL-853_125b 2950 chr3R 9382772 9382842 chr3R 9382947 9383017 10 175 25.5 28.0 26.8 0.4 245 chr3R 9382772 intron FER - chr3R 9382894 intron FER - chr3R 9383017 intron FER - chr3R_10_9380001 chr3R_9380001 RAL-853_125b 2951 chr3R 9526559 9526606 chr3R 9526691 9526738 6 132 12.0 9.5 10.8 0.5 179 chr3R 9526559 exon CG8176 + chr3R 9526648 3` UTR CG8176 + chr3R 9526738 3` UTR CG8176 + chr3R_6_9525001 chr3R_9525001 RAL-853_125b 2952 chr3R 9586652 9586714 chr3R 9586794 9586855 12 142 15.5 18.5 17.0 0.7 203 chr3R 9586652 intergenic CG8301 +,P58IPK + chr3R 9586754 intergenic CG8301 +,P58IPK + chr3R 9586855 intergenic P58IPK +,CG8301 + chr3R_12_9585001 chr3R_9585001 RAL-853_125b 2953 chr3R 9592443 9592511 chr3R 9592846 9592914 18 403 21.5 20.0 20.8 0.8 471 chr3R 9592443 intron CG8312 + chr3R 9592678 intron CG8312 + chr3R 9592914 intron CG8312 + chr3R_18_9590001 chr3R_9590001 RAL-853_125b 2954 chr3R 9600748 9600819 chr3R 9600893 9600915 4 133 19.0 22.0 20.5 0.2 167 chr3R 9600748 intron CG8312 + chr3R 9600832 intron CG8312 + chr3R 9600915 intron CG8312 + chr3R_4_9600001 chr3R_9600001 RAL-853_125b 2955 chr3R 9601415 9601485 chr3R 9601583 9601653 22 167 15.0 12.0 13.5 1.5 238 chr3R 9601415 intron CG8312 + chr3R 9601534 intron CG8312 + chr3R 9601653 intron CG8312 + chr3R_22_9600001 chr3R_9600001 RAL-853_125b 2956 chr3R 9608623 9608687 chr3R 9608939 9609002 21 316 20.5 19.5 20.0 1.0 379 chr3R 9608623 intron CG8312 + chr3R 9608812 intron CG8312 + chr3R 9609002 intron CG8312 + chr3R_21_9605001 chr3R_9605001 RAL-853_125b 2957 chr3R 9611829 9611858 chr3R 9611961 9611990 5 132 27.0 24.0 25.5 0.2 161 chr3R 9611829 intron CG8312 + chr3R 9611910 intron CG8312 + chr3R 9611990 intron CG8312 + chr3R_5_9610001 chr3R_9610001 RAL-853_125b 2958 chr3R 9620956 9620956 chr3R 21907535 21907536 6 12286580 36.0 37.5 36.8 0.2 12286580 chr3R 9620956 intron CG8312 + chr3R 15764246 intergenic not near genes chr3R 21907536 intergenic CG6678 + chr3R_6_15760001 chr3R_15760001 RAL-853_125b 2959 chr3R 9644553 9644597 chr3R 9644684 9644728 14 131 26.5 26.5 26.5 0.5 175 chr3R 9644553 intron Dh44 + chr3R 9644640 intron Dh44 + chr3R 9644728 intron Dh44 + chr3R_14_9640001 chr3R_9640001 RAL-853_125b 2960 chr3R 9684067 9684092 chr3R 9684206 9684215 4 135 37.5 40.0 38.8 0.1 148 chr3R 9684067 5` UTR CG9444 - chr3R 9684141 5` UTR CG9444 - chr3R 9684215 5` UTR CG9444 - chr3R_4_9680001 chr3R_9680001 RAL-853_125b 2961 chr3R 9684101 9684141 chr3R 9684202 9684280 11 130 35.5 39.5 37.5 0.3 179 chr3R 9684101 5` UTR CG9444 - chr3R 9684190 5` UTR CG9444 - chr3R 9684280 intergenic CG9444 -,eca - chr3R_11_9680001 chr3R_9680001 RAL-853_125b 2962 chr3R 9699931 9699986 chr3R 9700070 9700125 1360 15 138 25.0 18.0 21.5 0.7 194 chr3R 9699931 intron Unc-115a - chr3R 9700028 intron Unc-115a - chr3R 9700125 intron Unc-115a - chr3R_15_9700001 chr3R_9700001 RAL-853_125b 2963 chr3R 9836831 9836896 chr3R 9836963 9837034 22 136 16.0 18.0 17.0 1.2 203 chr3R 9836831 intron Teh1 - chr3R 9836932 intron Teh1 - chr3R 9837034 intron Teh1 - chr3R_22_9835001 chr3R_9835001 RAL-853_125b 2964 chr3R 9877986 9878021 chr3R 9878123 9878159 7 138 16.0 20.0 18.0 0.4 173 chr3R 9877986 intron,intron Glut4EF +,CR45029 - chr3R 9878072 intron,intron Glut4EF +,CR45029 - chr3R 9878159 intron,3` UTR Glut4EF +,CR45029 - chr3R_7_9875001 chr3R_9875001 RAL-853_125b 2965 chr3R 9891411 9891471 chr3R 9891601 9891633 16 186 7.0 0.0 3.5 3.6 222 chr3R 9891411 intron Glut4EF + chr3R 9891522 intron Glut4EF + chr3R 9891633 intron Glut4EF + chr3R_16_9890001 chr3R_9890001 RAL-853_125b 2966 chr3R 9893247 9893299 chr3R 9893640 9893692 7 402 26.0 7.0 16.5 0.4 445 chr3R 9893247 intron Glut4EF + chr3R 9893470 intron Glut4EF + chr3R 9893692 intron Glut4EF + chr3R_7_9890001 chr3R_9890001 RAL-853_125b 2967 chr3R 9898737 9898815 chr3R 9898879 9898956 28 139 7.5 3.5 5.5 4.3 219 chr3R 9898737 intron Glut4EF + chr3R 9898846 intron Glut4EF + chr3R 9898956 intron Glut4EF + chr3R_28_9895001 chr3R_9895001 RAL-853_125b 2968 chr3R 9920793 9920808 chr3R 9920940 9920955 4 147 6.0 15.0 10.5 0.3 162 chr3R 9920793 intron Glut4EF + chr3R 9920874 intron Glut4EF + chr3R 9920955 intron Glut4EF + chr3R_4_9920001 chr3R_9920001 RAL-853_125b 2969 chr3R 9936841 9936875 chr3R 9936967 9937001 9 126 23.5 22.5 23.0 0.4 160 chr3R 9936841 intron Glut4EF + chr3R 9936921 intron Glut4EF + chr3R 9937001 intron Glut4EF + chr3R_9_9935001 chr3R_9935001 RAL-853_125b 2970 chr3R 9936879 9936905 chr3R 9936950 9937031 17 119 19.5 21.0 20.2 0.8 152 chr3R 9936879 intron Glut4EF + chr3R 9936955 intron Glut4EF + chr3R 9937031 intron Glut4EF + chr3R_17_9935001 chr3R_9935001 RAL-853_125b 2971 chr3R 10073734 10073792 chr3R 10073893 10073951 18 159 6.5 0.5 3.5 4.0 217 chr3R 10073734 3` UTR nerfin-2 + chr3R 10073842 3` UTR CG5361 - chr3R 10073951 exon CG5361 - chr3R_18_10070001 chr3R_10070001 RAL-853_125b 2972 chr3R 10183230 10183294 chr3R 10183403 10183467 17 173 7.5 11.0 9.2 1.7 237 chr3R 10183230 intron CG12814 - chr3R 10183348 intron CG12814 - chr3R 10183467 intron CG12814 - chr3R_17_10180001 chr3R_10180001 RAL-853_125b 2973 chr3R 10188185 10188265 chr3R 10188345 10188425 17 158 6.5 6.5 6.5 2.3 240 chr3R 10188185 intron CG12814 - chr3R 10188305 intron CG12814 - chr3R 10188425 intron CG12814 - chr3R_17_10185001 chr3R_10185001 RAL-853_125b 2974 chr3R 10196908 10196928 chr3R 10202945 10202964 297 7 6037 19.0 10.5 14.8 0.4 6056 chr3R 10196908 exon Syn + chr3R 10199936 intron Syn + chr3R 10202964 intron Syn + chr3R_7_10195001 chr3R_10195001 RAL-853_125b 2975 chr3R 10231737 10231807 chr3R 10237364 10237434 mdg3 35 5626 11.5 9.5 10.5 3.0 5697 chr3R 10231737 intron CG42795 + chr3R 10234586 intron CG42795 + chr3R 10237434 intron CG42795 + chr3R_35_10230001 chr3R_10230001 RAL-853_125b 2976 chr3R 10255341 10255385 chr3R 10260831 10260875 I-element 18 5489 9.0 14.5 11.8 1.4 5534 chr3R 10255341 intergenic Sirt6 -,CG3999 + chr3R 10258108 intron Sirt6 - chr3R 10260875 exon Sirt6 - chr3R_18_10255001 chr3R_10255001 RAL-853_125b 2977 chr3R 10531830 10531873 chr3R 10531961 10531961 12 127 11.0 0.5 5.8 1.8 131 chr3R 10531830 intron hth - chr3R 10531896 intron hth - chr3R 10531961 intron hth - chr3R_12_10530001 chr3R_10530001 RAL-853_125b 2978 chr3R 10535294 10535339 chr3R 10535437 10535482 15 143 3.0 9.5 6.2 2.1 188 chr3R 10535294 intron hth - chr3R 10535388 intron hth - chr3R 10535482 intron hth - chr3R_15_10535001 chr3R_10535001 RAL-853_125b 2979 chr3R 10553793 10553807 chr3R 10553932 10553946 10 138 26.0 9.0 17.5 0.5 153 chr3R 10553793 intron hth - chr3R 10553870 intron hth - chr3R 10553946 intron hth - chr3R_10_10550001 chr3R_10550001 RAL-853_125b 2980 chr3R 10553808 10553861 chr3R 10553929 10554000 34 133 12.0 9.0 10.5 3.0 192 chr3R 10553808 intron hth - chr3R 10553904 intron hth - chr3R 10554000 intron hth - chr3R_34_10550001 chr3R_10550001 RAL-853_125b 2981 chr3R 10572385 10572392 chr3R 10572515 10572522 4 130 14.5 7.0 10.8 0.3 137 chr3R 10572385 intron hth - chr3R 10572454 intron hth - chr3R 10572522 intron hth - chr3R_4_10570001 chr3R_10570001 RAL-853_125b 2982 chr3R 10593425 10593457 chr3R 10593538 10593591 8 124 6.5 12.5 9.5 0.8 166 chr3R 10593425 intron hth - chr3R 10593508 intron hth - chr3R 10593591 exon hth - chr3R_8_10590001 chr3R_10590001 RAL-853_125b 2983 chr3R 10609318 10609392 chr3R 10609456 10609530 16 138 3.0 4.0 3.5 3.6 212 chr3R 10609318 intron hth - chr3R 10609424 intron hth - chr3R 10609530 intron hth - chr3R_16_10605001 chr3R_10605001 RAL-853_125b 2984 chr3R 10641546 10641615 chr3R 10641676 10641743 22 129 10.0 9.5 9.8 2.0 197 chr3R 10641546 5` UTR CR44018 + chr3R 10641644 5` UTR CR44018 + chr3R 10641743 5` UTR CR44018 + chr3R_22_10640001 chr3R_10640001 RAL-853_125b 2985 chr3R 10651768 10651836 chr3R 10651917 10651985 23 148 7.0 0.0 3.5 5.1 217 chr3R 10651768 intergenic not near genes chr3R 10651876 intergenic not near genes chr3R 10651985 intergenic not near genes chr3R_23_10650001 chr3R_10650001 RAL-853_125b 2986 chr3R 10668555 10668582 chr3R 10668681 10668708 7 124 15.5 4.5 10.0 0.6 153 chr3R 10668555 intergenic not near genes chr3R 10668632 intergenic not near genes chr3R 10668708 intergenic not near genes chr3R_7_10665001 chr3R_10665001 RAL-853_125b 2987 chr3R 10668583 10668604 chr3R 10668679 10668730 7 122 11.5 5.0 8.2 0.8 147 chr3R 10668583 intergenic not near genes chr3R 10668656 intergenic not near genes chr3R 10668730 intergenic not near genes chr3R_7_10665001 chr3R_10665001 RAL-853_125b 2988 chr3R 10723721 10723755 chr3R 10723863 10723897 12 142 13.0 0.5 6.8 1.5 176 chr3R 10723721 intergenic not near genes chr3R 10723809 intergenic not near genes chr3R 10723897 intergenic not near genes chr3R_12_10720001 chr3R_10720001 RAL-853_125b 2989 chr3R 10727604 10727673 chr3R 10727729 10727803 47 126 8.0 12.0 10.0 4.3 199 chr3R 10727604 intergenic not near genes chr3R 10727704 intergenic not near genes chr3R 10727803 intergenic not near genes chr3R_47_10725001 chr3R_10725001 RAL-853_125b 2990 chr3R 10732273 10732345 chr3R 10733195 10733267 38 922 11.0 9.5 10.2 3.4 994 chr3R 10732273 intergenic not near genes chr3R 10732770 intergenic not near genes chr3R 10733267 intergenic not near genes chr3R_38_10730001 chr3R_10730001 RAL-853_125b 2991 chr3R 10745378 10745451 chr3R 10745514 10745588 26 135 8.0 7.5 7.8 3.0 210 chr3R 10745378 intron TkR86C - chr3R 10745483 intron TkR86C - chr3R 10745588 intron TkR86C - chr3R_26_10745001 chr3R_10745001 RAL-853_125b 2992 chr3R 10804185 10804196 chr3R 10811767 10811778 17.6 4 7582 1.0 6.5 3.8 0.8 7593 chr3R 10804185 intergenic CG14692 - chr3R 10807982 intergenic not near genes chr3R 10811778 3` UTR CG14693 - chr3R_4_10805001 chr3R_10805001 RAL-853_125b 2993 chr3R 10817177 10817250 chr3R 10817310 10817343 24 131 9.5 7.5 8.5 2.5 166 chr3R 10817177 3` UTR CG4089 + chr3R 10817260 3` UTR CG4089 + chr3R 10817343 3` UTR CG4089 + chr3R_24_10815001 chr3R_10815001 RAL-853_125b 2994 chr3R 10868554 10868570 chr3R 10868675 10868696 4 124 14.0 6.0 10.0 0.4 142 chr3R 10868554 5` UTR SelR - chr3R 10868625 5` UTR SelR - chr3R 10868696 intergenic Tsp86D +,SelR - chr3R_4_10865001 chr3R_10865001 RAL-853_125b 2995 chr3R 10868572 10868624 chr3R 10868671 10868704 23 101 7.5 7.5 7.5 2.7 132 chr3R 10868572 5` UTR SelR - chr3R 10868638 5` UTR SelR - chr3R 10868704 intergenic Tsp86D +,SelR - chr3R_23_10865001 chr3R_10865001 RAL-853_125b 2996 chr3R 10900411 10900472 chr3R 10900537 10900599 12 127 10.0 11.5 10.8 1.0 188 chr3R 10900411 intergenic not near genes chr3R 10900505 intergenic not near genes chr3R 10900599 intergenic not near genes chr3R_12_10900001 chr3R_10900001 RAL-853_125b 2997 chr3R 10904578 10904645 chr3R 10906752 10906809 26 2172 5.5 4.0 4.8 4.5 2231 chr3R 10904578 intergenic not near genes chr3R 10905694 intergenic not near genes chr3R 10906809 intergenic not near genes chr3R_26_10905001 chr3R_10905001 RAL-853_125b 2998 chr3R 10906782 10906855 chr3R 10906908 10906956 22 122 4.0 5.5 4.8 3.8 174 chr3R 10906782 intergenic not near genes chr3R 10906869 intergenic not near genes chr3R 10906956 intergenic not near genes chr3R_22_10905001 chr3R_10905001 RAL-853_125b 2999 chr3R 10919641 10919648 chr3R 10919769 10919776 4 128 17.0 5.0 11.0 0.3 135 chr3R 10919641 intergenic not near genes chr3R 10919708 intergenic not near genes chr3R 10919776 intergenic not near genes chr3R_4_10915001 chr3R_10915001 RAL-853_125b 3000 chr3R 10919650 10919708 chr3R 10919767 10919836 31 125 7.5 5.5 6.5 4.1 186 chr3R 10919650 intergenic not near genes chr3R 10919743 intergenic not near genes chr3R 10919836 intergenic not near genes chr3R_31_10915001 chr3R_10915001 RAL-853_125b 3001 chr3R 10920004 10920067 chr3R 10920132 10920195 22 127 5.5 8.0 6.8 2.8 191 chr3R 10920004 intergenic not near genes chr3R 10920100 intergenic not near genes chr3R 10920195 intergenic not near genes chr3R_22_10920001 chr3R_10920001 RAL-853_125b 3002 chr3R 10957822 10957873 chr3R 10963254 10963312 Rt1c 28 5433 15.5 5.5 10.5 2.4 5490 chr3R 10957822 intergenic not near genes chr3R 10960567 intergenic not near genes chr3R 10963312 intergenic not near genes chr3R_28_10960001 chr3R_10960001 RAL-853_125b 3003 chr3R 10957876 10957885 chr3R 10963253 10963324 Rt1c 9 5424 10.5 5.0 7.8 1.0 5448 chr3R 10957876 intergenic not near genes chr3R 10960600 intergenic not near genes chr3R 10963324 intergenic not near genes chr3R_9_10960001 chr3R_10960001 RAL-853_125b 3004 chr3R 10979606 10979673 chr3R 10979738 10979805 22 129 8.0 7.5 7.8 2.5 199 chr3R 10979606 intron CG34114 + chr3R 10979706 intron CG34114 + chr3R 10979805 intron CG34114 + chr3R_22_10975001 chr3R_10975001 RAL-853_125b 3005 chr3R 10994234 10994310 chr3R 10994363 10994409 32 127 5.0 5.5 5.2 5.2 175 chr3R 10994234 intron CG34114 + chr3R 10994322 intron CG34114 + chr3R 10994409 intron CG34114 + chr3R_32_10990001 chr3R_10990001 RAL-853_125b 3006 chr3R 11024134 11024157 chr3R 11024280 11024284 4 141 16.0 9.5 12.8 0.3 150 chr3R 11024134 intron CG34114 + chr3R 11024209 intron CG34114 + chr3R 11024284 intron CG34114 + chr3R_4_11020001 chr3R_11020001 RAL-853_125b 3007 chr3R 11024158 11024193 chr3R 11024279 11024339 11 143 11.0 9.5 10.2 1.0 181 chr3R 11024158 intron CG34114 + chr3R 11024248 intron CG34114 + chr3R 11024339 intron CG34114 + chr3R_11_11020001 chr3R_11020001 RAL-853_125b 3008 chr3R 11052043 11052084 chr3R 11052172 11052213 6 128 5.5 5.0 5.2 1.0 170 chr3R 11052043 intergenic not near genes chr3R 11052128 intergenic not near genes chr3R 11052213 intergenic not near genes chr3R_6_11050001 chr3R_11050001 RAL-853_125b 3009 chr3R 11056847 11056893 chr3R 11056974 11057021 12 128 5.5 0.5 3.0 3.0 174 chr3R 11056847 intergenic not near genes chr3R 11056934 intergenic not near genes chr3R 11057021 intergenic not near genes chr3R_12_11055001 chr3R_11055001 RAL-853_125b 3010 chr3R 11085409 11085491 chr3R 11085536 11085618 11 127 4.5 4.5 4.5 2.0 209 chr3R 11085409 3` UTR CR44940 - chr3R 11085514 intergenic CR44940 - chr3R 11085618 intergenic CR44940 - chr3R_11_11085001 chr3R_11085001 RAL-853_125b 3011 chr3R 11102285 11102291 chr3R 11102411 11102422 5 130 23.0 9.5 16.2 0.3 137 chr3R 11102285 intergenic not near genes chr3R 11102354 intergenic not near genes chr3R 11102422 intergenic not near genes chr3R_5_11100001 chr3R_11100001 RAL-853_125b 3012 chr3R 11102293 11102348 chr3R 11102410 11102438 15 124 12.0 9.5 10.8 1.3 145 chr3R 11102293 intergenic not near genes chr3R 11102366 intergenic not near genes chr3R 11102438 intergenic not near genes chr3R_15_11100001 chr3R_11100001 RAL-853_125b 3013 chr3R 11154994 11155068 chr3R 11155122 11155196 25 126 9.5 8.0 8.8 2.6 202 chr3R 11154994 intron Ugt86Dc + chr3R 11155095 intron Ugt86Dc + chr3R 11155196 exon Ugt86Dc + chr3R_25_11155001 chr3R_11155001 RAL-853_125b 3014 chr3R 11174543 11174609 chr3R 11175307 11175373 14 764 46.0 54.5 50.2 0.3 830 chr3R 11174543 exon Ugt86Dj - chr3R 11174958 intron Ugt86Dj - chr3R 11175373 exon Ugt86Dj - chr3R_14_11170001 chr3R_11170001 RAL-853_125b 3015 chr3R 11192239 11192308 chr3R 11192936 11193005 38 692 8.5 9.0 8.8 3.9 766 chr3R 11192239 intergenic not near genes chr3R 11192622 intergenic not near genes chr3R 11193005 intergenic not near genes chr3R_38_11190001 chr3R_11190001 RAL-853_125b 3016 chr3R 11247194 11247221 chr3R 11247325 11247352 INE-1 9 130 19.5 7.0 13.2 0.6 158 chr3R 11247194 intergenic CG5214 +,CR43283 - chr3R 11247273 intergenic CR43283 -,CG5214 + chr3R 11247352 intergenic CR43283 -,CG5214 + chr3R_9_11245001 chr3R_11245001 RAL-853_125b 3017 chr3R 11265882 11265917 chr3R 11266016 11266051 17 133 9.0 11.5 10.2 1.5 169 chr3R 11265882 intergenic not near genes chr3R 11265966 intergenic not near genes chr3R 11266051 intergenic not near genes chr3R_17_11265001 chr3R_11265001 RAL-853_125b 3018 chr3R 11269413 11269468 chr3R 11269588 11269643 14 175 1.5 6.5 4.0 2.8 230 chr3R 11269413 intergenic CR31386 - chr3R 11269528 3` UTR CR31386 - chr3R 11269643 3` UTR CR31386 - chr3R_14_11265001 chr3R_11265001 RAL-853_125b 3019 chr3R 11313192 11313260 chr3R 11313330 11313399 25 136 3.0 13.5 8.2 2.7 207 chr3R 11313192 intergenic not near genes chr3R 11313296 intergenic not near genes chr3R 11313399 intergenic not near genes chr3R_25_11310001 chr3R_11310001 RAL-853_125b 3020 chr3R 11342497 11342570 chr3R 11342623 11342696 36 125 9.5 10.0 9.8 3.3 199 chr3R 11342497 intron pros + chr3R 11342596 intron pros + chr3R 11342696 intron pros + chr3R_36_11340001 chr3R_11340001 RAL-853_125b 3021 chr3R 11342878 11342901 chr3R 11343003 11343036 16 132 7.0 13.5 10.2 1.4 158 chr3R 11342878 intron pros + chr3R 11342957 intron pros + chr3R 11343036 intron pros + chr3R_16_11340001 chr3R_11340001 RAL-853_125b 3022 chr3R 11379192 11379227 chr3R 11388397 11388432 roo 15 9204 9.0 11.0 10.0 1.4 9240 chr3R 11379192 intron pros + chr3R 11383812 intron pros + chr3R 11388432 intron pros + chr3R_15_11380001 chr3R_11380001 RAL-853_125b 3023 chr3R 11452029 11452044 chr3R 11452166 11452181 7 136 15.0 4.0 9.5 0.7 152 chr3R 11452029 intron CG17230 + chr3R 11452105 intron CG17230 + chr3R 11452181 intron CG17230 + chr3R_7_11450001 chr3R_11450001 RAL-853_125b 3024 chr3R 11452045 11452104 chr3R 11452165 11452241 32 136 7.0 4.0 5.5 4.9 196 chr3R 11452045 intron CG17230 + chr3R 11452143 intron CG17230 + chr3R 11452241 intron CG17230 + chr3R_32_11450001 chr3R_11450001 RAL-853_125b 3025 chr3R 11455539 11455603 chr3R 11455715 11455779 29 174 8.0 8.0 8.0 3.2 240 chr3R 11455539 intron,intron CG17230 +,PGRP-LB - chr3R 11455659 intron,intron CG17230 +,PGRP-LB - chr3R 11455779 intron,intron CG17230 +,PGRP-LB - chr3R_29_11455001 chr3R_11455001 RAL-853_125b 3026 chr3R 11483398 11483407 chr3R 11483533 11483542 6 135 22.0 9.0 15.5 0.4 144 chr3R 11483398 intergenic not near genes chr3R 11483470 intergenic not near genes chr3R 11483542 intergenic not near genes chr3R_6_11480001 chr3R_11480001 RAL-853_125b 3027 chr3R 11483410 11483482 chr3R 11483530 11483557 23 128 3.5 7.5 5.5 3.5 147 chr3R 11483410 intergenic not near genes chr3R 11483484 intergenic not near genes chr3R 11483557 intergenic not near genes chr3R_23_11480001 chr3R_11480001 RAL-853_125b 3028 chr3R 11664742 11664822 chr3R 11664884 11664944 29 141 0.0 9.5 4.8 5.0 202 chr3R 11664742 intron CG42327 + chr3R 11664843 intron CG42327 + chr3R 11664944 intron CG42327 + chr3R_29_11660001 chr3R_11660001 RAL-853_125b 3029 chr3R 11694681 11694738 chr3R 11694824 11694881 18 143 7.0 5.5 6.2 2.5 200 chr3R 11694681 intergenic Fer3 - chr3R 11694781 intergenic Fer3 - chr3R 11694881 intergenic not near genes chr3R_18_11690001 chr3R_11690001 RAL-853_125b 3030 chr3R 11708592 11708662 chr3R 11708850 11708920 24 258 9.0 0.0 4.5 4.4 328 chr3R 11708592 intergenic not near genes chr3R 11708756 intergenic not near genes chr3R 11708920 intergenic not near genes chr3R_24_11705001 chr3R_11705001 RAL-853_125b 3031 chr3R 11713450 11713524 chr3R 11713580 11713651 29 127 7.0 8.0 7.5 3.4 201 chr3R 11713450 intergenic not near genes chr3R 11713550 intergenic not near genes chr3R 11713651 intergenic not near genes chr3R_29_11710001 chr3R_11710001 RAL-853_125b 3032 chr3R 11728122 11728205 chr3R 11728257 11728336 17 133 5.0 4.0 4.5 3.1 214 chr3R 11728122 intron CG12594 + chr3R 11728229 intron CG12594 + chr3R 11728336 intron CG12594 + chr3R_17_11725001 chr3R_11725001 RAL-853_125b 3033 chr3R 11811049 11811118 chr3R 11811194 11811264 42 144 7.0 11.5 9.2 4.1 215 chr3R 11811049 5` UTR ClC-a - chr3R 11811156 intron ClC-a - chr3R 11811264 intron ClC-a - chr3R_42_11810001 chr3R_11810001 RAL-853_125b 3034 chr3R 11830312 11830360 chr3R 11830446 11830494 20 133 9.0 12.0 10.5 1.7 182 chr3R 11830312 intron CG6959 - chr3R 11830403 intron CG6959 - chr3R 11830494 intron CG6959 - chr3R_20_11830001 chr3R_11830001 RAL-853_125b 3035 chr3R 11830926 11830945 chr3R 11831120 11831139 8 194 10.0 4.0 7.0 1.0 213 chr3R 11830926 intron CG6959 - chr3R 11831032 intron CG6959 - chr3R 11831139 intron CG6959 - chr3R_8_11830001 chr3R_11830001 RAL-853_125b 3036 chr3R 11841023 11841085 chr3R 11846258 11846326 BS 30 5238 15.0 10.0 12.5 2.2 5303 chr3R 11841023 intron CG6959 - chr3R 11843674 intron CG6959 - chr3R 11846326 intron CG6959 - chr3R_30_11840001 chr3R_11840001 RAL-853_125b 3037 chr3R 11919260 11919332 chr3R 11919398 11919434 25 130 5.0 9.5 7.2 3.0 174 chr3R 11919260 intron Cad87A - chr3R 11919347 intron Cad87A - chr3R 11919434 intron Cad87A - chr3R_25_11915001 chr3R_11915001 RAL-853_125b 3038 chr3R 11945339 11945405 chr3R 11945486 11945553 22 146 8.5 6.5 7.5 2.6 214 chr3R 11945339 intron Cad87A - chr3R 11945446 intron Cad87A - chr3R 11945553 intron Cad87A - chr3R_22_11945001 chr3R_11945001 RAL-853_125b 3039 chr3R 11957810 11957875 chr3R 11958143 11958208 S-element 10 331 4.5 1.5 3.0 2.5 398 chr3R 11957810 intergenic not near genes chr3R 11958009 intergenic not near genes chr3R 11958208 intergenic not near genes chr3R_10_11955001 chr3R_11955001 RAL-853_125b 3040 chr3R 11994953 11995021 chr3R 11995083 11995141 17 121 8.5 8.5 8.5 1.8 188 chr3R 11994953 intron Tk - chr3R 11995047 exon Tk - chr3R 11995141 exon Tk - chr3R_17_11995001 chr3R_11995001 RAL-853_125b 3041 chr3R 12016992 12017011 chr3R 12017119 12017131 11 126 14.0 13.5 13.8 0.7 139 chr3R 12016992 5` UTR CG3313 - chr3R 12017062 intergenic CG3313 -,Spt3 + chr3R 12017131 intergenic Spt3 +,CG3313 - chr3R_11_12015001 chr3R_12015001 RAL-853_125b 3042 chr3R 12022836 12022908 chr3R 12025063 12025135 pogo 27 2227 8.0 7.5 7.8 3.1 2299 chr3R 12022836 intergenic not near genes chr3R 12023986 intergenic not near genes chr3R 12025135 intergenic not near genes chr3R_27_12020001 chr3R_12020001 RAL-853_125b 3043 chr3R 12037269 12037345 chr3R 12037576 12037653 10 308 0.0 7.5 3.8 2.1 384 chr3R 12037269 intergenic not near genes chr3R 12037461 intergenic not near genes chr3R 12037653 intergenic not near genes chr3R_10_12035001 chr3R_12035001 RAL-853_125b 3044 chr3R 12085364 12085419 chr3R 12085506 12085563 9 143 6.5 0.5 3.5 2.0 199 chr3R 12085364 intron CG14741 - chr3R 12085464 intron CG14741 - chr3R 12085563 intron CG14741 - chr3R_9_12085001 chr3R_12085001 RAL-853_125b 3045 chr3R 12111837 12111920 chr3R 12111972 12112036 17 131 0.5 3.0 1.8 6.1 199 chr3R 12111837 intergenic dpr17 + chr3R 12111936 intergenic not near genes chr3R 12112036 intergenic not near genes chr3R_17_12110001 chr3R_12110001 RAL-853_125b 3046 chr3R 12154045 12154079 chr3R 12154442 12154455 5 386 39.0 45.0 42.0 0.1 410 chr3R 12154045 intron dpr15 - chr3R 12154250 intron dpr15 - chr3R 12154455 intron dpr15 - chr3R_5_12150001 chr3R_12150001 RAL-853_125b 3047 chr3R 12154038 12154039 chr3R 12154458 12154491 8 393 31.0 45.5 38.2 0.2 453 chr3R 12154038 intron dpr15 - chr3R 12154264 intron dpr15 - chr3R 12154491 intron dpr15 - chr3R_8_12150001 chr3R_12150001 RAL-853_125b 3048 chr3R 12169189 12169222 chr3R 12169317 12169350 8 126 13.0 6.5 9.8 0.7 161 chr3R 12169189 intergenic not near genes chr3R 12169270 intergenic not near genes chr3R 12169350 intergenic not near genes chr3R_8_12165001 chr3R_12165001 RAL-853_125b 3049 chr3R 12175215 12175259 chr3R 12175345 12175389 18 128 5.0 8.5 6.8 2.3 174 chr3R 12175215 intergenic not near genes chr3R 12175302 intergenic not near genes chr3R 12175389 intergenic not near genes chr3R_18_12175001 chr3R_12175001 RAL-853_125b 3050 chr3R 12183128 12183198 chr3R 12183264 12183334 20 135 5.0 7.0 6.0 2.9 206 chr3R 12183128 intergenic not near genes chr3R 12183231 intergenic not near genes chr3R 12183334 intergenic not near genes chr3R_20_12180001 chr3R_12180001 RAL-853_125b 3051 chr3R 12267811 12267884 chr3R 12267941 12268014 20 129 8.0 6.0 7.0 2.5 203 chr3R 12267811 intron svp + chr3R 12267912 intron svp + chr3R 12268014 intron svp + chr3R_20_12265001 chr3R_12265001 RAL-853_125b 3052 chr3R 12344080 12344155 chr3R 12344207 12344282 31 127 2.5 4.5 3.5 6.9 202 chr3R 12344080 intergenic not near genes chr3R 12344181 intergenic not near genes chr3R 12344282 intergenic not near genes chr3R_31_12340001 chr3R_12340001 RAL-853_125b 3053 chr3R 12348610 12348621 chr3R 12348765 12348776 6 155 22.0 11.0 16.5 0.3 166 chr3R 12348610 intergenic CG10038 - chr3R 12348693 intergenic CG10038 - chr3R 12348776 intergenic CG10038 - chr3R_6_12345001 chr3R_12345001 RAL-853_125b 3054 chr3R 12348627 12348678 chr3R 12348757 12348818 25 148 10.0 8.0 9.0 2.5 191 chr3R 12348627 intergenic CG10038 - chr3R 12348722 intergenic CG10038 - chr3R 12348818 intergenic CG10038 - chr3R_25_12345001 chr3R_12345001 RAL-853_125b 3055 chr3R 12364718 12364785 chr3R 12364859 12364926 26 141 10.0 9.0 9.5 2.5 208 chr3R 12364718 intergenic Tim17a1 -,GstD10 - chr3R 12364822 3` UTR GstD10 - chr3R 12364926 exon GstD10 - chr3R_26_12360001 chr3R_12360001 RAL-853_125b 3056 chr3R 12541131 12541154 chr3R 12543317 12543340 11 2183 21.0 5.5 13.2 0.8 2209 chr3R 12541131 intron Octbeta3R - chr3R 12542236 intron Octbeta3R - chr3R 12543340 intron Octbeta3R - chr3R_11_12540001 chr3R_12540001 RAL-853_125b 3057 chr3R 12541157 12541200 chr3R 12543307 12543364 20 2170 8.5 4.5 6.5 2.7 2207 chr3R 12541157 intron Octbeta3R - chr3R 12542260 intron Octbeta3R - chr3R 12543364 intron Octbeta3R - chr3R_20_12540001 chr3R_12540001 RAL-853_125b 3058 chr3R 12555400 12555416 chr3R 12555529 12555545 6 128 13.5 6.0 9.8 0.6 145 chr3R 12555400 intron Octbeta2R - chr3R 12555472 intron Octbeta2R - chr3R 12555545 intron Octbeta2R - chr3R_6_12555001 chr3R_12555001 RAL-853_125b 3059 chr3R 12555419 12555465 chr3R 12555528 12555593 13 123 7.0 6.0 6.5 1.7 174 chr3R 12555419 intron Octbeta2R - chr3R 12555506 intron Octbeta2R - chr3R 12555593 intron Octbeta2R - chr3R_13_12555001 chr3R_12555001 RAL-853_125b 3060 chr3R 12598957 12598979 chr3R 12599147 12599168 11 189 20.5 9.0 14.8 0.7 211 chr3R 12598957 intergenic not near genes chr3R 12599062 intergenic not near genes chr3R 12599168 intergenic not near genes chr3R_11_12595001 chr3R_12595001 RAL-853_125b 3061 chr3R 12598980 12599027 chr3R 12599144 12599197 22 182 9.0 7.5 8.2 2.4 217 chr3R 12598980 intergenic not near genes chr3R 12599088 intergenic not near genes chr3R 12599197 intergenic not near genes chr3R_22_12595001 chr3R_12595001 RAL-853_125b 3062 chr3R 12725922 12725970 chr3R 12726050 12726125 13 138 4.5 6.5 5.5 2.0 203 chr3R 12725922 intergenic not near genes chr3R 12726024 intergenic not near genes chr3R 12726125 intergenic not near genes chr3R_13_12725001 chr3R_12725001 RAL-853_125b 3063 chr3R 12733433 12733503 chr3R 12733560 12733630 36 124 10.0 11.5 10.8 3.1 197 chr3R 12733433 intergenic not near genes chr3R 12733532 intergenic not near genes chr3R 12733630 intergenic not near genes chr3R_36_12730001 chr3R_12730001 RAL-853_125b 3064 chr3R 12733814 12733880 chr3R 12733944 12734010 27 130 11.5 10.5 11.0 2.2 196 chr3R 12733814 intergenic not near genes chr3R 12733912 intergenic not near genes chr3R 12734010 intergenic not near genes chr3R_27_12730001 chr3R_12730001 RAL-853_125b 3065 chr3R 12748770 12748835 chr3R 12749221 12749230 6 432 4.5 6.5 5.5 0.9 460 chr3R 12748770 intron beat-Vc - chr3R 12749000 intron beat-Vc - chr3R 12749230 intron beat-Vc - chr3R_6_12745001 chr3R_12745001 RAL-853_125b 3066 chr3R 12763067 12763150 chr3R 12763205 12763277 23 130 0.0 5.0 2.5 6.6 210 chr3R 12763067 intron beat-Vc - chr3R 12763172 intron beat-Vc - chr3R 12763277 intron beat-Vc - chr3R_23_12760001 chr3R_12760001 RAL-853_125b 3067 chr3R 12771383 12771440 chr3R 12771542 12771594 15 173 6.0 4.0 5.0 2.5 211 chr3R 12771383 intron beat-Vc - chr3R 12771488 intron beat-Vc - chr3R 12771594 intron beat-Vc - chr3R_15_12770001 chr3R_12770001 RAL-853_125b 3068 chr3R 12787889 12787954 chr3R 12788022 12788040 22 130 9.5 0.0 4.8 3.8 151 chr3R 12787889 intergenic not near genes chr3R 12787964 intergenic not near genes chr3R 12788040 intergenic not near genes chr3R_22_12785001 chr3R_12785001 RAL-853_125b 3069 chr3R 12805811 12805879 chr3R 12805947 12806015 28 136 7.5 7.5 7.5 3.3 204 chr3R 12805811 intergenic not near genes chr3R 12805913 intergenic not near genes chr3R 12806015 intergenic not near genes chr3R_28_12805001 chr3R_12805001 RAL-853_125b 3070 chr3R 12818976 12819039 chr3R 12819109 12819173 22 133 10.5 3.0 6.8 2.8 197 chr3R 12818976 intergenic not near genes chr3R 12819074 intergenic not near genes chr3R 12819173 intergenic not near genes chr3R_22_12815001 chr3R_12815001 RAL-853_125b 3071 chr3R 12886880 12886892 chr3R 12887015 12887027 8 134 13.5 7.0 10.2 0.7 147 chr3R 12886880 intergenic not near genes chr3R 12886954 intergenic not near genes chr3R 12887027 intergenic not near genes chr3R_8_12885001 chr3R_12885001 RAL-853_125b 3072 chr3R 12886894 12886952 chr3R 12887011 12887087 34 133 4.5 7.0 5.8 5.0 193 chr3R 12886894 intergenic not near genes chr3R 12886990 intergenic not near genes chr3R 12887087 intergenic not near genes chr3R_34_12885001 chr3R_12885001 RAL-853_125b 3073 chr3R 12920116 12920168 chr3R 12925369 12925421 copia 21 5251 10.5 7.5 9.0 2.1 5305 chr3R 12920116 intron beat-Vb + chr3R 12922768 intron beat-Vb + chr3R 12925421 intron beat-Vb + chr3R_21_12920001 chr3R_12920001 RAL-853_125b 3074 chr3R 12926686 12926700 chr3R 12926847 12926861 6 160 6.5 7.0 6.8 0.8 175 chr3R 12926686 intron beat-Vb + chr3R 12926774 intron beat-Vb + chr3R 12926861 intron beat-Vb + chr3R_6_12925001 chr3R_12925001 RAL-853_125b 3075 chr3R 12926702 12926748 chr3R 12926838 12926909 22 160 4.5 5.0 4.8 3.8 207 chr3R 12926702 intron beat-Vb + chr3R 12926806 intron beat-Vb + chr3R 12926909 intron beat-Vb + chr3R_22_12925001 chr3R_12925001 RAL-853_125b 3076 chr3R 12931174 12931245 chr3R 12931293 12931372 30 125 9.5 9.0 9.2 2.9 198 chr3R 12931174 intron,3` UTR beat-Vb +,CR44236 - chr3R 12931273 intron,3` UTR beat-Vb +,CR44236 - chr3R 12931372 intron beat-Vb + chr3R_30_12930001 chr3R_12930001 RAL-853_125b 3077 chr3R 12943930 12944001 chr3R 12944067 12944138 24 137 6.0 6.0 6.0 3.4 208 chr3R 12943930 intergenic not near genes chr3R 12944034 intergenic not near genes chr3R 12944138 intergenic not near genes chr3R_24_12940001 chr3R_12940001 RAL-853_125b 3078 chr3R 12952253 12952259 chr3R 12952413 12952424 4 169 20.0 8.0 14.0 0.3 171 chr3R 12952253 intron grsm - chr3R 12952338 intron grsm - chr3R 12952424 intron grsm - chr3R_4_12950001 chr3R_12950001 RAL-853_125b 3079 chr3R 12952260 12952310 chr3R 12952405 12952475 21 167 7.0 4.0 5.5 3.2 215 chr3R 12952260 intron grsm - chr3R 12952368 intron grsm - chr3R 12952475 intron grsm - chr3R_21_12950001 chr3R_12950001 RAL-853_125b 3080 chr3R 13059911 13059944 chr3R 13060156 13060173 12 244 10.5 0.0 5.2 1.9 262 chr3R 13059911 intron sim + chr3R 13060042 intron sim + chr3R 13060173 intron sim + chr3R_12_13060001 chr3R_13060001 RAL-853_125b 3081 chr3R 13066956 13067131 chr3R 13067093 13067257 31 130 0.5 0.0 0.2 25.8 301 chr3R 13066956 intron sim + chr3R 13067106 intron sim + chr3R 13067257 intron sim + chr3R_31_13065001 chr3R_13065001 RAL-853_125b 3082 chr3R 13071008 13071083 chr3R 13071150 13071166 21 128 4.5 1.0 2.8 5.5 158 chr3R 13071008 intron sim + chr3R 13071087 intron sim + chr3R 13071166 intron sim + chr3R_21_13070001 chr3R_13070001 RAL-853_125b 3083 chr3R 13075308 13075361 chr3R 13075439 13075492 23 130 15.5 4.0 9.8 2.1 184 chr3R 13075308 intron sim + chr3R 13075400 intron sim + chr3R 13075492 intron sim + chr3R_23_13075001 chr3R_13075001 RAL-853_125b 3084 chr3R 13103976 13104000 chr3R 13104103 13104127 6 127 9.0 0.0 4.5 1.1 151 chr3R 13103976 intron timeout + chr3R 13104052 intron timeout + chr3R 13104127 intron timeout + chr3R_6_13100001 chr3R_13100001 RAL-853_125b 3085 chr3R 13120728 13120800 chr3R 13120854 13120927 22 124 6.5 7.0 6.8 2.8 199 chr3R 13120728 intron timeout + chr3R 13120828 intron timeout + chr3R 13120927 intron timeout + chr3R_22_13120001 chr3R_13120001 RAL-853_125b 3086 chr3R 13135789 13135851 chr3R 13138014 13138076 pogo 25 2225 8.5 5.5 7.0 3.1 2287 chr3R 13135789 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136932 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138076 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_25_13135001 chr3R_13135001 RAL-853_125b 3087 chr3R 13142987 13143019 chr3R 13148614 13148645 mdg3 21 5626 17.0 8.5 12.8 1.5 5658 chr3R 13142987 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145816 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148645 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_21_13145001 chr3R_13145001 RAL-853_125b 3088 chr3R 13143020 13143059 chr3R 13148612 13148649 mdg3 19 5615 8.0 7.5 7.8 2.2 5629 chr3R 13143020 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145834 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148649 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_19_13145001 chr3R_13145001 RAL-853_125b 3089 chr3R 13149720 13149760 chr3R 13150037 13150069 10 317 9.0 12.5 10.8 0.8 349 chr3R 13149720 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13149894 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13150069 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_10_13145001 chr3R_13145001 RAL-853_125b 3090 chr3R 13195906 13195938 chr3R 13196051 13196083 18 144 23.5 7.5 15.5 1.1 177 chr3R 13195906 intergenic not near genes chr3R 13195994 intergenic not near genes chr3R 13196083 intergenic not near genes chr3R_18_13195001 chr3R_13195001 RAL-853_125b 3091 chr3R 13195939 13195982 chr3R 13196048 13196123 24 139 12.0 7.5 9.8 2.2 184 chr3R 13195939 intergenic not near genes chr3R 13196031 intergenic not near genes chr3R 13196123 intergenic not near genes chr3R_24_13195001 chr3R_13195001 RAL-853_125b 3092 chr3R 13248605 13248677 chr3R 13248754 13248826 39 149 12.0 0.0 6.0 5.6 221 chr3R 13248605 intron Ace - chr3R 13248716 intron Ace - chr3R 13248826 intron Ace - chr3R_39_13245001 chr3R_13245001 RAL-853_125b 3093 chr3R 13249573 13249587 chr3R 13249737 13249751 9 164 16.0 2.0 9.0 0.9 178 chr3R 13249573 intron Ace - chr3R 13249662 intron Ace - chr3R 13249751 intron Ace - chr3R_9_13245001 chr3R_13245001 RAL-853_125b 3094 chr3R 13260677 13260747 chr3R 13260858 13260925 50 180 10.5 13.5 12.0 3.8 248 chr3R 13260677 intron CG11686 + chr3R 13260801 intron CG11686 + chr3R 13260925 intron CG11686 + chr3R_50_13260001 chr3R_13260001 RAL-853_125b 3095 chr3R 13272013 13272076 chr3R 13272147 13272211 16 134 4.5 6.0 5.2 2.6 198 chr3R 13272013 intergenic CG8449 - chr3R 13272112 intergenic CG8449 - chr3R 13272211 intergenic CG8449 - chr3R_16_13270001 chr3R_13270001 RAL-853_125b 3096 chr3R 13274171 13274234 chr3R 13274298 13274363 30 128 9.5 10.5 10.0 2.7 192 chr3R 13274171 intergenic not near genes chr3R 13274267 intergenic not near genes chr3R 13274363 intergenic not near genes chr3R_30_13270001 chr3R_13270001 RAL-853_125b 3097 chr3R 13305619 13305674 chr3R 13305756 13305811 14 137 7.5 8.0 7.8 1.6 192 chr3R 13305619 intron CG32473 + chr3R 13305715 intron CG32473 + chr3R 13305811 intron CG32473 + chr3R_14_13305001 chr3R_13305001 RAL-853_125b 3098 chr3R 13306082 13306149 chr3R 13306519 13306586 19 437 4.5 6.0 5.2 3.1 504 chr3R 13306082 intron CG32473 + chr3R 13306334 intron CG32473 + chr3R 13306586 intron CG32473 + chr3R_19_13305001 chr3R_13305001 RAL-853_125b 3099 chr3R 13314060 13314122 chr3R 13318898 13318960 Doc 12 4838 6.0 2.0 4.0 2.4 4900 chr3R 13314060 intergenic not near genes chr3R 13316510 intergenic not near genes chr3R 13318960 intergenic CG45080 - chr3R_12_13315001 chr3R_13315001 RAL-853_125b 3100 chr3R 13326889 13326963 chr3R 13327034 13327103 26 144 8.5 5.0 6.8 3.3 214 chr3R 13326889 intergenic not near genes chr3R 13326996 intergenic not near genes chr3R 13327103 intergenic not near genes chr3R_26_13325001 chr3R_13325001 RAL-853_125b 3101 chr3R 13356047 13356111 chr3R 13356182 13356246 20 134 5.0 6.0 5.5 3.1 199 chr3R 13356047 intergenic not near genes chr3R 13356146 intergenic not near genes chr3R 13356246 intergenic not near genes chr3R_20_13355001 chr3R_13355001 RAL-853_125b 3102 chr3R 13391596 13391656 chr3R 13391724 13391784 26 128 7.5 14.5 11.0 2.2 188 chr3R 13391596 intron CCHa2 - chr3R 13391690 intron CCHa2 - chr3R 13391784 intron CCHa2 - chr3R_26_13390001 chr3R_13390001 RAL-853_125b 3103 chr3R 13496591 13496660 chr3R 13496720 13496789 20 129 6.5 6.5 6.5 2.7 198 chr3R 13496591 intergenic not near genes chr3R 13496690 intergenic not near genes chr3R 13496789 intergenic not near genes chr3R_20_13495001 chr3R_13495001 RAL-853_125b 3104 chr3R 13517216 13517259 chr3R 13520083 13520125 jockey 12 2864 3.5 5.0 4.2 2.3 2909 chr3R 13517216 intergenic not near genes chr3R 13518670 intergenic not near genes chr3R 13520125 intergenic not near genes chr3R_12_13515001 chr3R_13515001 RAL-853_125b 3105 chr3R 13526641 13526693 chr3R 13526770 13526820 22 129 5.5 3.0 4.2 4.2 179 chr3R 13526641 intergenic not near genes chr3R 13526730 intergenic not near genes chr3R 13526820 intergenic not near genes chr3R_22_13525001 chr3R_13525001 RAL-853_125b 3106 chr3R 13554104 13554165 chr3R 13554233 13554294 22 127 9.5 15.0 12.2 1.7 190 chr3R 13554104 intergenic not near genes chr3R 13554199 intergenic not near genes chr3R 13554294 intergenic not near genes chr3R_22_13550001 chr3R_13550001 RAL-853_125b 3107 chr3R 13603009 13603293 chr3R 13603150 13603435 29 140 12.5 7.5 10.0 2.6 426 chr3R 13603009 intergenic not near genes chr3R 13603222 intergenic not near genes chr3R 13603435 intergenic not near genes chr3R_29_13600001 chr3R_13600001 RAL-853_125b 3108 chr3R 13603310 13603363 chr3R 13603452 13603505 23 141 5.0 9.5 7.2 2.8 195 chr3R 13603310 intergenic not near genes chr3R 13603408 intergenic not near genes chr3R 13603505 intergenic not near genes chr3R_23_13600001 chr3R_13600001 RAL-853_125b 3109 chr3R 13604012 13604083 chr3R 13604297 13604368 21 285 6.5 4.5 5.5 3.2 356 chr3R 13604012 intergenic not near genes chr3R 13604190 intergenic not near genes chr3R 13604368 intergenic not near genes chr3R_21_13600001 chr3R_13600001 RAL-853_125b 3110 chr3R 13606686 13606727 chr3R 13606862 13606924 8 194 8.5 8.5 8.5 0.8 238 chr3R 13606686 intergenic CG9759 - chr3R 13606805 intergenic CG9759 - chr3R 13606924 intergenic CG9759 - chr3R_8_13605001 chr3R_13605001 RAL-853_125b 3111 chr3R 13659738 13659845 chr3R 13659930 13659983 6 156 0.0 0.5 0.2 5.0 245 chr3R 13659738 intron Hrb87F - chr3R 13659860 intron Hrb87F - chr3R 13659983 intron Hrb87F - chr3R_6_13655001 chr3R_13655001 RAL-853_125b 3112 chr3R 13672897 13672968 chr3R 13673025 13673096 30 127 10.5 15.5 13.0 2.1 199 chr3R 13672897 intron Task6 - chr3R 13672996 intron Task6 - chr3R 13673096 intron Task6 - chr3R_30_13670001 chr3R_13670001 RAL-853_125b 3113 chr3R 13693028 13693028 chr3R 21907534 21907535 9 8214507 35.5 37.5 36.5 0.2 8214507 chr3R 13693028 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907535 intergenic CG6678 + chr3R_9_17800001 chr3R_17800001 RAL-853_125b 3114 chr3R 13714478 13714550 chr3R 13714657 13714739 27 189 4.5 5.5 5.0 4.5 261 chr3R 13714478 intergenic CR34044 - chr3R 13714608 intergenic CR34044 - chr3R 13714739 intergenic CG34383 + chr3R_27_13710001 chr3R_13710001 RAL-853_125b 3115 chr3R 13719440 13719487 chr3R 13719991 13720036 26 552 10.5 9.5 10.0 2.4 596 chr3R 13719440 intron CG34383 + chr3R 13719738 intron CG34383 + chr3R 13720036 intron CG34383 + chr3R_26_13715001 chr3R_13715001 RAL-853_125b 3116 chr3R 13828807 13828873 chr3R 13828931 13829009 17 135 7.0 2.5 4.8 2.9 202 chr3R 13828807 intergenic CR43300 + chr3R 13828908 intergenic CR43300 + chr3R 13829009 intergenic not near genes chr3R_17_13825001 chr3R_13825001 RAL-853_125b 3117 chr3R 13830707 13830715 chr3R 13830921 13830927 4 214 22.5 8.5 15.5 0.2 220 chr3R 13830707 intergenic not near genes chr3R 13830817 intergenic not near genes chr3R 13830927 intergenic not near genes chr3R_4_13830001 chr3R_13830001 RAL-853_125b 3118 chr3R 13830723 13830760 chr3R 13830917 13830974 7 211 11.5 7.5 9.5 0.7 251 chr3R 13830723 intergenic not near genes chr3R 13830848 intergenic not near genes chr3R 13830974 intergenic not near genes chr3R_7_13830001 chr3R_13830001 RAL-853_125b 3119 chr3R 13830763 13830785 chr3R 13830977 13830999 12 214 5.5 20.5 13.0 0.9 236 chr3R 13830763 intergenic not near genes chr3R 13830881 intergenic not near genes chr3R 13830999 intergenic not near genes chr3R_12_13830001 chr3R_13830001 RAL-853_125b 3120 chr3R 13841234 13841272 chr3R 13841349 13841403 9 122 0.5 7.5 4.0 1.8 169 chr3R 13841234 intergenic not near genes chr3R 13841318 intergenic not near genes chr3R 13841403 intergenic not near genes chr3R_9_13840001 chr3R_13840001 RAL-853_125b 3121 chr3R 13850261 13850338 chr3R 13850406 13850476 23 142 0.5 5.5 3.0 5.8 215 chr3R 13850261 intergenic not near genes chr3R 13850368 intergenic not near genes chr3R 13850476 intergenic not near genes chr3R_23_13850001 chr3R_13850001 RAL-853_125b 3122 chr3R 13863632 13863711 chr3R 13863770 13863818 26 136 6.5 5.0 5.8 3.8 186 chr3R 13863632 intergenic not near genes chr3R 13863725 intergenic not near genes chr3R 13863818 intergenic not near genes chr3R_26_13860001 chr3R_13860001 RAL-853_125b 3123 chr3R 13909871 13909907 chr3R 13910000 13910036 20 128 7.0 13.0 10.0 1.8 165 chr3R 13909871 intergenic not near genes chr3R 13909954 intergenic not near genes chr3R 13910036 intergenic not near genes chr3R_20_13905001 chr3R_13905001 RAL-853_125b 3124 chr3R 14014228 14014249 chr3R 14014410 14014431 6 182 12.0 0.0 6.0 0.9 203 chr3R 14014228 intron rdx - chr3R 14014330 intron rdx - chr3R 14014431 intron rdx - chr3R_6_14010001 chr3R_14010001 RAL-853_125b 3125 chr3R 14021604 14021677 chr3R 14023471 14023544 S-element 29 1867 12.5 6.0 9.2 2.8 1940 chr3R 14021604 intron rdx - chr3R 14022574 intron rdx - chr3R 14023544 intron rdx - chr3R_29_14020001 chr3R_14020001 RAL-853_125b 3126 chr3R 14037541 14037587 chr3R 14037672 14037712 19 133 13.0 6.5 9.8 1.8 171 chr3R 14037541 intergenic not near genes chr3R 14037626 intergenic not near genes chr3R 14037712 intergenic not near genes chr3R_19_14035001 chr3R_14035001 RAL-853_125b 3127 chr3R 14058077 14058139 chr3R 14058247 14058309 27 170 7.5 3.0 5.2 4.4 232 chr3R 14058077 5` UTR foxo + chr3R 14058193 intron foxo + chr3R 14058309 intron foxo + chr3R_27_14055001 chr3R_14055001 RAL-853_125b 3128 chr3R 14067093 14067156 chr3R 14067222 14067285 21 129 5.0 8.0 6.5 2.8 192 chr3R 14067093 exon foxo + chr3R 14067189 intron foxo + chr3R 14067285 intron foxo + chr3R_21_14065001 chr3R_14065001 RAL-853_125b 3129 chr3R 14079778 14079853 chr3R 14079910 14079985 8 131 1.5 2.0 1.8 2.9 207 chr3R 14079778 intron foxo + chr3R 14079882 intron foxo + chr3R 14079985 intron foxo + chr3R_8_14075001 chr3R_14075001 RAL-853_125b 3130 chr3R 14083365 14083390 chr3R 14083516 14083541 10 151 17.5 0.0 8.8 1.0 176 chr3R 14083365 intron foxo + chr3R 14083453 intron foxo + chr3R 14083541 intron foxo + chr3R_10_14080001 chr3R_14080001 RAL-853_125b 3131 chr3R 14091471 14091532 chr3R 14091600 14091661 17 129 5.0 3.0 4.0 3.4 190 chr3R 14091471 intron Npc2b + chr3R 14091566 intron Npc2b + chr3R 14091661 intron Npc2b + chr3R_17_14090001 chr3R_14090001 RAL-853_125b 3132 chr3R 14093711 14093782 chr3R 14093837 14093902 25 126 12.0 10.5 11.2 2.0 191 chr3R 14093711 intron CCHa1 - chr3R 14093806 intron CCHa1 - chr3R 14093902 intron CCHa1 - chr3R_25_14090001 chr3R_14090001 RAL-853_125b 3133 chr3R 14166680 14166694 chr3R 14167325 14167389 7 677 9.0 5.5 7.2 0.9 709 chr3R 14166680 3` UTR Dop1R1 - chr3R 14167034 3` UTR Dop1R1 - chr3R 14167389 3` UTR Dop1R1 - chr3R_7_14165001 chr3R_14165001 RAL-853_125b 3134 chr3R 14180766 14180829 chr3R 14185581 14185644 F-element 18 4815 12.0 7.5 9.8 1.7 4878 chr3R 14180766 intron Dop1R1 - chr3R 14183205 intron Dop1R1 - chr3R 14185644 intron Dop1R1 - chr3R_18_14180001 chr3R_14180001 RAL-853_125b 3135 chr3R 14194385 14194449 chr3R 14203584 14203648 roo 23 9199 10.0 10.5 10.2 2.1 9263 chr3R 14194385 intron Dop1R1 - chr3R 14199016 intron Dop1R1 - chr3R 14203648 intron Dop1R1 - chr3R_23_14195001 chr3R_14195001 RAL-853_125b 3136 chr3R 14246351 14246363 chr3R 14247895 14247908 jockey 5 1543 17.0 6.0 11.5 0.4 1557 chr3R 14246351 intergenic not near genes chr3R 14247130 intergenic not near genes chr3R 14247908 intergenic not near genes chr3R_5_14245001 chr3R_14245001 RAL-853_125b 3137 chr3R 14246366 14246375 chr3R 14247893 14247921 jockey 11 1542 13.0 6.0 9.5 1.0 1555 chr3R 14246366 intergenic not near genes chr3R 14247144 intergenic not near genes chr3R 14247921 intergenic not near genes chr3R_11_14245001 chr3R_14245001 RAL-853_125b 3138 chr3R 14246376 14246418 chr3R 14247892 14247938 jockey 15 1534 7.5 5.5 6.5 2.0 1562 chr3R 14246376 intergenic not near genes chr3R 14247157 intergenic not near genes chr3R 14247938 intergenic not near genes chr3R_15_14245001 chr3R_14245001 RAL-853_125b 3139 chr3R 14248691 14248735 chr3R 14248819 14248863 8 128 4.5 0.0 2.2 2.5 172 chr3R 14248691 intergenic not near genes chr3R 14248777 intergenic not near genes chr3R 14248863 intergenic not near genes chr3R_8_14245001 chr3R_14245001 RAL-853_125b 3140 chr3R 14253653 14253720 chr3R 14253782 14253849 25 128 6.0 4.0 5.0 4.2 196 chr3R 14253653 intron Aats-met - chr3R 14253751 intron Aats-met - chr3R 14253849 intron Aats-met - chr3R_25_14250001 chr3R_14250001 RAL-853_125b 3141 chr3R 14308783 14308845 chr3R 14308983 14309032 18 201 6.0 8.5 7.2 2.2 249 chr3R 14308783 intergenic su(Hw) -,RpII15 + chr3R 14308908 intergenic RpII15 +,su(Hw) - chr3R 14309032 intergenic RpII15 +,su(Hw) - chr3R_18_14305001 chr3R_14305001 RAL-853_125b 3142 chr3R 14364024 14364043 chr3R 14364150 14364169 8 126 18.0 12.5 15.2 0.5 145 chr3R 14364024 intron NK7.1 - chr3R 14364096 intron NK7.1 - chr3R 14364169 intron NK7.1 - chr3R_8_14360001 chr3R_14360001 RAL-853_125b 3143 chr3R 14364046 14364087 chr3R 14364139 14364202 23 113 12.0 11.5 11.8 1.8 156 chr3R 14364046 intron NK7.1 - chr3R 14364124 intron NK7.1 - chr3R 14364202 intron NK7.1 - chr3R_23_14360001 chr3R_14360001 RAL-853_125b 3144 chr3R 14386167 14386237 chr3R 14386297 14386371 8 133 0.0 5.5 2.8 2.1 204 chr3R 14386167 intergenic not near genes chr3R 14386269 intergenic not near genes chr3R 14386371 intergenic not near genes chr3R_8_14385001 chr3R_14385001 RAL-853_125b 3145 chr3R 14489220 14489291 chr3R 14489626 14489696 19 405 4.5 10.0 7.2 2.3 476 chr3R 14489220 intergenic not near genes chr3R 14489458 intergenic not near genes chr3R 14489696 intergenic not near genes chr3R_19_14485001 chr3R_14485001 RAL-853_125b 3146 chr3R 14522968 14522984 chr3R 14523099 14523115 6 131 7.0 20.5 13.8 0.4 147 chr3R 14522968 intron,exon Pde6 -,Cyp313a1 + chr3R 14523042 intron,3` UTR Pde6 -,Cyp313a1 + chr3R 14523115 intron Pde6 - chr3R_6_14520001 chr3R_14520001 RAL-853_125b 3147 chr3R 14608420 14608474 chr3R 14608562 14608616 24 142 4.0 8.5 6.2 3.3 196 chr3R 14608420 intergenic stumps + chr3R 14608518 intergenic stumps + chr3R 14608616 intergenic not near genes chr3R_24_14605001 chr3R_14605001 RAL-853_125b 3148 chr3R 14615232 14615272 chr3R 14615372 14615412 6 136 0.0 5.0 2.5 1.7 180 chr3R 14615232 intron CG14853 + chr3R 14615322 intron CG14853 + chr3R 14615412 intron CG14853 + chr3R_6_14615001 chr3R_14615001 RAL-853_125b 3149 chr3R 14633161 14633220 chr3R 14633290 14633349 20 129 11.5 8.0 9.8 1.9 188 chr3R 14633161 intron,intron CG7886 -,Cad88C + chr3R 14633255 intron,intron CG7886 -,Cad88C + chr3R 14633349 intron,intron CG7886 -,Cad88C + chr3R_20_14630001 chr3R_14630001 RAL-853_125b 3150 chr3R 14662264 14662340 chr3R 14662395 14662471 22 131 10.0 10.0 10.0 2.0 207 chr3R 14662264 exon Rad17 - chr3R 14662368 intron Rad17 - chr3R 14662471 exon Rad17 - chr3R_22_14660001 chr3R_14660001 RAL-853_125b 3151 chr3R 14760481 14760520 chr3R 14760622 14760661 12 138 7.5 0.5 4.0 2.4 180 chr3R 14760481 intron jvl + chr3R 14760571 intron jvl + chr3R 14760661 intron jvl + chr3R_12_14760001 chr3R_14760001 RAL-853_125b 3152 chr3R 14764521 14764581 chr3R 14764669 14764727 11 145 5.5 8.5 7.0 1.4 206 chr3R 14764521 intron jvl + chr3R 14764624 intron jvl + chr3R 14764727 intron jvl + chr3R_11_14760001 chr3R_14760001 RAL-853_125b 3153 chr3R 14768928 14768996 chr3R 14769076 14769150 30 151 6.5 8.0 7.2 3.7 222 chr3R 14768928 intron jvl + chr3R 14769039 intron jvl + chr3R 14769150 intron jvl + chr3R_30_14765001 chr3R_14765001 RAL-853_125b 3154 chr3R 14837456 14837526 chr3R 14837586 14837656 24 129 6.5 9.5 8.0 2.7 200 chr3R 14837456 intron btsz - chr3R 14837556 intron btsz - chr3R 14837656 intron btsz - chr3R_24_14835001 chr3R_14835001 RAL-853_125b 3155 chr3R 14859678 14859709 chr3R 14859775 14859794 7 99 17.0 9.0 13.0 0.5 116 chr3R 14859678 exon btsz - chr3R 14859736 exon btsz - chr3R 14859794 exon btsz - chr3R_7_14855001 chr3R_14855001 RAL-853_125b 3156 chr3R 14869823 14869884 chr3R 14869964 14870025 25 140 12.5 7.5 10.0 2.3 202 chr3R 14869823 intron btsz - chr3R 14869924 intron btsz - chr3R 14870025 intron btsz - chr3R_25_14865001 chr3R_14865001 RAL-853_125b 3157 chr3R 14877825 14877893 chr3R 14877952 14878020 18 127 6.0 5.0 5.5 2.8 195 chr3R 14877825 intergenic not near genes chr3R 14877922 intergenic not near genes chr3R 14878020 intergenic not near genes chr3R_18_14875001 chr3R_14875001 RAL-853_125b 3158 chr3R 14926895 14926923 chr3R 14927026 14927046 13 130 8.0 0.0 4.0 2.6 151 chr3R 14926895 intergenic not near genes chr3R 14926970 intergenic not near genes chr3R 14927046 intergenic not near genes chr3R_13_14925001 chr3R_14925001 RAL-853_125b 3159 chr3R 14944855 14944891 chr3R 14944986 14945022 8 131 9.0 10.0 9.5 0.8 167 chr3R 14944855 intergenic not near genes chr3R 14944938 intergenic not near genes chr3R 14945022 intergenic not near genes chr3R_8_14940001 chr3R_14940001 RAL-853_125b 3160 chr3R 15041353 15041413 chr3R 15045187 15045247 Doc 6 3834 0.0 4.5 2.2 1.9 3894 chr3R 15041353 intergenic not near genes chr3R 15043300 intergenic not near genes chr3R 15045247 intergenic not near genes chr3R_6_15040001 chr3R_15040001 RAL-853_125b 3161 chr3R 15049404 15049482 chr3R 15049580 15049658 35 176 7.0 5.0 6.0 5.0 254 chr3R 15049404 intergenic not near genes chr3R 15049531 intergenic not near genes chr3R 15049658 intergenic not near genes chr3R_35_15045001 chr3R_15045001 RAL-853_125b 3162 chr3R 15059237 15059300 chr3R 15059498 15059559 BS 7 260 0.0 2.5 1.2 3.2 322 chr3R 15059237 intron dpr9 - chr3R 15059398 intron dpr9 - chr3R 15059559 intron dpr9 - chr3R_7_15055001 chr3R_15055001 RAL-853_125b 3163 chr3R 15071156 15071212 chr3R 15071324 15071387 23 175 7.0 11.0 9.0 2.3 231 chr3R 15071156 intron dpr9 - chr3R 15071272 intron dpr9 - chr3R 15071387 intron dpr9 - chr3R_23_15070001 chr3R_15070001 RAL-853_125b 3164 chr3R 15075823 15075878 chr3R 15075950 15076005 14 125 6.0 0.0 3.0 3.5 182 chr3R 15075823 intron dpr9 - chr3R 15075914 intron dpr9 - chr3R 15076005 intron dpr9 - chr3R_14_15075001 chr3R_15075001 RAL-853_125b 3165 chr3R 15079761 15079839 chr3R 15080052 15080123 pogo 19 287 9.5 0.0 4.8 3.3 362 chr3R 15079761 3` UTR CG6966 - chr3R 15079942 3` UTR CG6966 - chr3R 15080123 3` UTR CG6966 - chr3R_19_15075001 chr3R_15075001 RAL-853_125b 3166 chr3R 15087177 15087220 chr3R 15087303 15087313 11 119 13.0 7.5 10.2 1.0 136 chr3R 15087177 intron CG6966 - chr3R 15087245 intron CG6966 - chr3R 15087313 intron CG6966 - chr3R_11_15085001 chr3R_15085001 RAL-853_125b 3167 chr3R 15102452 15102511 chr3R 15109759 15109818 412 13 7307 10.5 5.5 8.0 1.4 7366 chr3R 15102452 intron CG42788 - chr3R 15106135 intron CG42788 - chr3R 15109818 intron CG42788 - chr3R_13_15105001 chr3R_15105001 RAL-853_125b 3168 chr3R 15114869 15114906 chr3R 15114995 15115032 12 126 12.0 5.5 8.8 1.2 163 chr3R 15114869 intron CG42788 - chr3R 15114950 intron CG42788 - chr3R 15115032 intron CG42788 - chr3R_12_15110001 chr3R_15110001 RAL-853_125b 3169 chr3R 15132036 15132042 chr3R 15135136 15135152 Juan 8 3109 31.0 26.0 28.5 0.3 3116 chr3R 15132036 intergenic CG42788 - chr3R 15133594 intergenic not near genes chr3R 15135152 3` UTR CG6912 - chr3R_8_15130001 chr3R_15130001 RAL-853_125b 3170 chr3R 15132043 15132049 chr3R 15135134 15135159 Juan 9 3108 28.0 25.5 26.8 0.3 3116 chr3R 15132043 intergenic CG42788 - chr3R 15133601 intergenic not near genes chr3R 15135159 3` UTR CG6912 - chr3R_9_15130001 chr3R_15130001 RAL-853_125b 3171 chr3R 15132050 15132071 chr3R 15135130 15135160 Juan 21 3106 23.0 24.0 23.5 0.9 3110 chr3R 15132050 intergenic CG42788 - chr3R 15133605 intergenic not near genes chr3R 15135160 3` UTR CG6912 - chr3R_21_15130001 chr3R_15130001 RAL-853_125b 3172 chr3R 15130868 15130906 chr3R 15141179 15141217 14 10311 43.5 68.0 55.8 0.2 10349 chr3R 15130868 intron CG42788 - chr3R 15136042 exon CG6912 - chr3R 15141217 exon CG3987 + chr3R_14_15135001 chr3R_15135001 RAL-853_125b 3173 chr3R 15162498 15162561 chr3R 15167316 15167379 F-element 25 4818 14.0 8.5 11.2 2.0 4881 chr3R 15162498 intron Gyc88E + chr3R 15164938 intron Gyc88E + chr3R 15167379 intron Gyc88E + chr3R_25_15160001 chr3R_15160001 RAL-853_125b 3174 chr3R 15224324 15224403 chr3R 15224515 15224594 29 189 9.5 8.5 9.0 2.9 270 chr3R 15224324 exon CG31344 - chr3R 15224459 intron CG31344 - chr3R 15224594 intron CG31344 - chr3R_29_15220001 chr3R_15220001 RAL-853_125b 3175 chr3R 15286987 15286987 chr3R 21907536 21907536 4 6620549 31.0 37.0 34.0 0.1 6620549 chr3R 15286987 intron Tm1 + chr3R 18597262 intron,exon qin +,CG14304 - chr3R 21907536 intergenic CG6678 + chr3R_4_18595001 chr3R_18595001 RAL-853_125b 3176 chr3R 15286988 15286988 chr3R 21907534 21907536 4 6620547 31.0 37.5 34.2 0.1 6620548 chr3R 15286988 intron Tm1 + chr3R 18597262 intron,exon qin +,CG14304 - chr3R 21907536 intergenic CG6678 + chr3R_4_18595001 chr3R_18595001 RAL-853_125b 3177 chr3R 15406097 15406169 chr3R 15406228 15406304 17 133 4.0 3.5 3.8 3.5 207 chr3R 15406097 intron CG6125 - chr3R 15406200 intron CG6125 - chr3R 15406304 intron CG6125 - chr3R_17_15405001 chr3R_15405001 RAL-853_125b 3178 chr3R 15416209 15416268 chr3R 15416338 15416398 31 128 7.0 10.5 8.8 3.2 189 chr3R 15416209 3` UTR Atx2 + chr3R 15416304 3` UTR Atx2 + chr3R 15416398 3` UTR Atx2 + chr3R_31_15415001 chr3R_15415001 RAL-853_125b 3179 chr3R 15445860 15445903 chr3R 15445995 15446038 16 135 9.5 0.0 4.8 2.8 178 chr3R 15445860 exon AdamTS-A - chr3R 15445949 intron AdamTS-A - chr3R 15446038 intron AdamTS-A - chr3R_16_15445001 chr3R_15445001 RAL-853_125b 3180 chr3R 15517565 15517572 chr3R 15517686 15517705 4 130 19.0 3.5 11.2 0.3 140 chr3R 15517565 intergenic not near genes chr3R 15517635 intergenic not near genes chr3R 15517705 intergenic not near genes chr3R_4_15515001 chr3R_15515001 RAL-853_125b 3181 chr3R 15517577 15517631 chr3R 15517685 15517725 22 122 7.5 3.0 5.2 3.5 148 chr3R 15517577 intergenic not near genes chr3R 15517651 intergenic not near genes chr3R 15517725 intergenic not near genes chr3R_22_15515001 chr3R_15515001 RAL-853_125b 3182 chr3R 15594657 15594669 chr3R 15594790 15594794 6 132 0.0 17.5 8.8 0.6 137 chr3R 15594657 intergenic not near genes chr3R 15594726 intergenic not near genes chr3R 15594794 intergenic not near genes chr3R_6_15590001 chr3R_15590001 RAL-853_125b 3183 chr3R 15601127 15601189 chr3R 15608699 15608761 412 28 7570 14.0 18.0 16.0 1.6 7634 chr3R 15601127 intergenic not near genes chr3R 15604944 intergenic not near genes chr3R 15608761 intergenic not near genes chr3R_28_15600001 chr3R_15600001 RAL-853_125b 3184 chr3R 15618698 15618754 chr3R 15626212 15626278 blood 19 7521 8.5 7.5 8.0 2.1 7580 chr3R 15618698 intergenic not near genes chr3R 15622488 intergenic not near genes chr3R 15626278 intergenic not near genes chr3R_19_15620001 chr3R_15620001 RAL-853_125b 3185 chr3R 15635158 15635238 chr3R 15635329 15635400 15 169 0.0 6.5 3.2 3.6 242 chr3R 15635158 intergenic CG43335 + chr3R 15635279 intergenic CG43335 + chr3R 15635400 intergenic CG43335 + chr3R_15_15635001 chr3R_15635001 RAL-853_125b 3186 chr3R 15646866 15646939 chr3R 15647007 15647080 27 140 5.5 10.5 8.0 3.0 214 chr3R 15646866 intergenic not near genes chr3R 15646973 intergenic not near genes chr3R 15647080 intergenic not near genes chr3R_27_15645001 chr3R_15645001 RAL-853_125b 3187 chr3R 15702867 15702893 chr3R 15703107 15703129 6 239 0.0 14.5 7.2 0.7 262 chr3R 15702867 intergenic not near genes chr3R 15702998 intergenic not near genes chr3R 15703129 intergenic not near genes chr3R_6_15700001 chr3R_15700001 RAL-853_125b 3188 chr3R 15734157 15734192 chr3R 15734287 15734312 10 136 11.0 11.0 11.0 0.8 155 chr3R 15734157 intergenic not near genes chr3R 15734234 intergenic not near genes chr3R 15734312 intergenic not near genes chr3R_10_15730001 chr3R_15730001 RAL-853_125b 3189 chr3R 15735199 15735228 chr3R 15739969 15739998 F-element 6 4770 8.5 8.5 8.5 0.6 4799 chr3R 15735199 intergenic not near genes chr3R 15737598 intergenic not near genes chr3R 15739998 intergenic not near genes chr3R_6_15735001 chr3R_15735001 RAL-853_125b 3190 chr3R 15778681 15778751 chr3R 15778840 15778910 25 158 5.0 7.5 6.2 3.5 229 chr3R 15778681 intergenic not near genes chr3R 15778796 intergenic not near genes chr3R 15778910 intergenic not near genes chr3R_25_15775001 chr3R_15775001 RAL-853_125b 3191 chr3R 15808015 15808085 chr3R 15808160 15808224 34 140 9.0 9.0 9.0 3.4 209 chr3R 15808015 intron alpha-Man-IIb + chr3R 15808120 intron alpha-Man-IIb + chr3R 15808224 intron alpha-Man-IIb + chr3R_34_15805001 chr3R_15805001 RAL-853_125b 3192 chr3R 15813285 15813349 chr3R 15813420 15813484 17 134 14.5 8.5 11.5 1.4 199 chr3R 15813285 intron alpha-Man-IIb + chr3R 15813384 intron alpha-Man-IIb + chr3R 15813484 intron alpha-Man-IIb + chr3R_17_15810001 chr3R_15810001 RAL-853_125b 3193 chr3R 15868892 15868921 chr3R 15869022 15869031 12 128 15.5 0.0 7.8 1.4 139 chr3R 15868892 intron CG31183 - chr3R 15868962 intron CG31183 - chr3R 15869031 intron CG31183 - chr3R_12_15865001 chr3R_15865001 RAL-853_125b 3194 chr3R 15937388 15937429 chr3R 15937514 15937566 12 130 12.5 8.5 10.5 1.0 178 chr3R 15937388 intron Sap47 + chr3R 15937477 intron Sap47 + chr3R 15937566 intron Sap47 + chr3R_12_15935001 chr3R_15935001 RAL-853_125b 3195 chr3R 15937432 15937448 chr3R 15937507 15937585 9 115 9.0 7.0 8.0 1.0 153 chr3R 15937432 intron Sap47 + chr3R 15937508 intron Sap47 + chr3R 15937585 intron Sap47 + chr3R_9_15935001 chr3R_15935001 RAL-853_125b 3196 chr3R 15952851 15952921 chr3R 15952982 15953052 22 131 7.0 5.5 6.2 3.1 201 chr3R 15952851 intron Sap47 + chr3R 15952952 intron Sap47 + chr3R 15953052 intron Sap47 + chr3R_22_15950001 chr3R_15950001 RAL-853_125b 3197 chr3R 15954364 15954428 chr3R 15954486 15954555 40 123 6.5 9.0 7.8 4.5 191 chr3R 15954364 intron Sap47 + chr3R 15954460 intron Sap47 + chr3R 15954555 intron Sap47 + chr3R_40_15950001 chr3R_15950001 RAL-853_125b 3198 chr3R 16033361 16033429 chr3R 16033492 16033560 29 131 6.5 2.5 4.5 5.3 199 chr3R 16033361 intron pnr + chr3R 16033460 intron pnr + chr3R 16033560 intron pnr + chr3R_29_16030001 chr3R_16030001 RAL-853_125b 3199 chr3R 16047981 16048052 chr3R 16048118 16048183 43 133 11.5 9.5 10.5 3.7 202 chr3R 16047981 exon ird5 - chr3R 16048082 exon ird5 - chr3R 16048183 exon ird5 - chr3R_43_16045001 chr3R_16045001 RAL-853_125b 3200 chr3R 16164974 16165026 chr3R 16165108 16165160 14 127 12.0 13.0 12.5 1.0 186 chr3R 16164974 intron CG6006 + chr3R 16165067 intron CG6006 + chr3R 16165160 intron CG6006 + chr3R_14_16165001 chr3R_16165001 RAL-853_125b 3201 chr3R 16189364 16189442 chr3R 16189817 16189895 invader4 18 453 6.0 5.5 5.8 2.6 531 chr3R 16189364 intron sra + chr3R 16189630 intron sra + chr3R 16189895 intron sra + chr3R_18_16185001 chr3R_16185001 RAL-853_125b 3202 chr3R 16225039 16225114 chr3R 16225174 16225249 34 135 5.5 1.0 3.2 8.1 210 chr3R 16225039 intergenic not near genes chr3R 16225144 intergenic not near genes chr3R 16225249 intergenic tara + chr3R_34_16225001 chr3R_16225001 RAL-853_125b 3203 chr3R 16226759 16226775 chr3R 16226887 16226903 9 128 7.5 15.0 11.2 0.7 144 chr3R 16226759 intron tara + chr3R 16226831 intron tara + chr3R 16226903 intron tara + chr3R_9_16225001 chr3R_16225001 RAL-853_125b 3204 chr3R 16246473 16246553 chr3R 16246599 16246679 16 126 7.5 11.5 9.5 1.5 206 chr3R 16246473 intron tara + chr3R 16246576 intron tara + chr3R 16246679 intron tara + chr3R_16_16245001 chr3R_16245001 RAL-853_125b 3205 chr3R 16260767 16260957 chr3R 16260898 16261099 18 145 0.0 0.0 0.0 18.0 332 chr3R 16260767 intergenic tara + chr3R 16260933 intergenic bor - chr3R 16261099 intergenic bor - chr3R_18_16260001 chr3R_16260001 RAL-853_125b 3206 chr3R 16275533 16275606 chr3R 16275898 16275971 33 361 8.0 6.5 7.2 4.0 438 chr3R 16275533 intron gish + chr3R 16275752 intron gish + chr3R 16275971 intron gish + chr3R_33_16275001 chr3R_16275001 RAL-853_125b 3207 chr3R 16298874 16298900 chr3R 16299009 16299035 6 135 6.0 13.5 9.8 0.6 161 chr3R 16298874 intron gish + chr3R 16298954 intron gish + chr3R 16299035 intron gish + chr3R_6_16295001 chr3R_16295001 RAL-853_125b 3208 chr3R 16319997 16320062 chr3R 16320127 16320184 20 130 10.5 10.5 10.5 1.7 187 chr3R 16319997 intron Sulf1 - chr3R 16320090 intron Sulf1 - chr3R 16320184 intron Sulf1 - chr3R_20_16320001 chr3R_16320001 RAL-853_125b 3209 chr3R 16332706 16332715 chr3R 16332842 16332851 7 136 19.0 8.0 13.5 0.5 145 chr3R 16332706 intron Sulf1 - chr3R 16332778 intron Sulf1 - chr3R 16332851 intron Sulf1 - chr3R_7_16330001 chr3R_16330001 RAL-853_125b 3210 chr3R 16332718 16332775 chr3R 16332838 16332911 20 135 6.0 6.5 6.2 2.8 193 chr3R 16332718 intron Sulf1 - chr3R 16332814 intron Sulf1 - chr3R 16332911 intron Sulf1 - chr3R_20_16330001 chr3R_16330001 RAL-853_125b 3211 chr3R 16429489 16429504 chr3R 16429615 16429630 5 119 4.5 15.0 9.8 0.5 141 chr3R 16429489 intergenic not near genes chr3R 16429560 intergenic not near genes chr3R 16429630 intergenic not near genes chr3R_5_16425001 chr3R_16425001 RAL-853_125b 3212 chr3R 16472552 16472678 chr3R 16472666 16472780 30 127 0.0 3.0 1.5 12.0 228 chr3R 16472552 intergenic Gyc-89Da + chr3R 16472666 5` UTR Gyc-89Da + chr3R 16472780 intron Gyc-89Da + chr3R_30_16470001 chr3R_16470001 RAL-853_125b 3213 chr3R 16519890 16519932 chr3R 16520033 16520075 22 143 12.5 12.5 12.5 1.6 185 chr3R 16519890 intron CG42342 + chr3R 16519982 intron CG42342 + chr3R 16520075 intron CG42342 + chr3R_22_16515001 chr3R_16515001 RAL-853_125b 3214 chr3R 16534407 16534453 chr3R 16534545 16534591 7 138 7.0 4.5 5.8 1.0 184 chr3R 16534407 intron CG42342 + chr3R 16534499 intron CG42342 + chr3R 16534591 intron CG42342 + chr3R_7_16530001 chr3R_16530001 RAL-853_125b 3215 chr3R 16536024 16536096 chr3R 16536302 16536374 9 277 6.5 9.5 8.0 1.0 350 chr3R 16536024 intron CG42342 + chr3R 16536199 intron CG42342 + chr3R 16536374 intron CG42342 + chr3R_9_16535001 chr3R_16535001 RAL-853_125b 3216 chr3R 16582860 16582917 chr3R 16582986 16583046 20 125 6.0 14.0 10.0 1.8 186 chr3R 16582860 intron Scp2 - chr3R 16582953 intron Scp2 - chr3R 16583046 intron Scp2 - chr3R_20_16580001 chr3R_16580001 RAL-853_125b 3217 chr3R 16633650 16633677 chr3R 16633799 16633827 7 150 12.0 16.0 14.0 0.5 177 chr3R 16633650 intron Fas1 + chr3R 16633738 intron Fas1 + chr3R 16633827 intron Fas1 + chr3R_7_16630001 chr3R_16630001 RAL-853_125b 3218 chr3R 16671197 16671262 chr3R 16671326 16671391 20 128 8.0 7.5 7.8 2.3 194 chr3R 16671197 intron Ubx - chr3R 16671294 intron Ubx - chr3R 16671391 intron Ubx - chr3R_20_16670001 chr3R_16670001 RAL-853_125b 3219 chr3R 16695197 16695262 chr3R 16695345 16695393 18 146 9.5 5.0 7.2 2.2 196 chr3R 16695197 intron Ubx - chr3R 16695295 intron Ubx - chr3R 16695393 intron Ubx - chr3R_18_16695001 chr3R_16695001 RAL-853_125b 3220 chr3R 16731885 16731938 chr3R 16732016 16732068 9 130 6.0 4.0 5.0 1.5 183 chr3R 16731885 intron Ubx - chr3R 16731976 intron Ubx - chr3R 16732068 intron Ubx - chr3R_9_16730001 chr3R_16730001 RAL-853_125b 3221 chr3R 16756276 16756352 chr3R 16762517 16762562 diver 29 6236 4.5 5.0 4.8 5.0 6286 chr3R 16756276 intron bxd - chr3R 16759419 intron bxd - chr3R 16762562 intron bxd - chr3R_29_16755001 chr3R_16755001 RAL-853_125b 3222 chr3R 16771578 16771580 chr3R 16771697 16771706 4 122 16.5 7.5 12.0 0.3 128 chr3R 16771578 intron bxd - chr3R 16771642 intron bxd - chr3R 16771706 intron bxd - chr3R_4_16770001 chr3R_16770001 RAL-853_125b 3223 chr3R 16771583 16771629 chr3R 16771694 16771755 23 119 7.5 7.0 7.2 2.8 172 chr3R 16771583 intron bxd - chr3R 16771669 intron bxd - chr3R 16771755 intron bxd - chr3R_23_16770001 chr3R_16770001 RAL-853_125b 3224 chr3R 16852423 16852491 chr3R 16852574 16852642 22 150 4.0 7.0 5.5 3.4 219 chr3R 16852423 intron,intron iab-8 -,iab-4 + chr3R 16852532 intron,intron iab-8 -,iab-4 + chr3R 16852642 intron,intron iab-8 -,iab-4 + chr3R_22_16850001 chr3R_16850001 RAL-853_125b 3225 chr3R 16860285 16860335 chr3R 16860413 16860463 8 128 7.5 1.5 4.5 1.5 178 chr3R 16860285 intron iab-8 - chr3R 16860374 intron iab-8 - chr3R 16860463 intron iab-8 - chr3R_8_16860001 chr3R_16860001 RAL-853_125b 3226 chr3R 16987685 16987701 chr3R 16987803 16987823 8 124 16.0 8.5 12.2 0.6 138 chr3R 16987685 5` UTR CG18622 - chr3R 16987754 intergenic CG18622 - chr3R 16987823 intergenic CG18622 - chr3R_8_16985001 chr3R_16985001 RAL-853_125b 3227 chr3R 16987705 16987740 chr3R 16987802 16987807 16 108 7.0 8.5 7.8 1.8 102 chr3R 16987705 5` UTR CG18622 - chr3R 16987756 intergenic CG18622 - chr3R 16987807 intergenic CG18622 - chr3R_16_16985001 chr3R_16985001 RAL-853_125b 3228 chr3R 17058996 17059067 chr3R 17059265 17059309 30 268 9.5 7.0 8.2 3.3 313 chr3R 17058996 intron Dad + chr3R 17059152 intron Dad + chr3R 17059309 intron Dad + chr3R_30_17055001 chr3R_17055001 RAL-853_125b 3229 chr3R 17067472 17067519 chr3R 17067605 17067652 27 132 10.0 4.5 7.2 3.3 180 chr3R 17067472 intron Dad + chr3R 17067562 intron Dad + chr3R 17067652 intron Dad + chr3R_27_17065001 chr3R_17065001 RAL-853_125b 3230 chr3R 17101093 17101126 chr3R 17101223 17101256 20 130 8.5 0.0 4.2 3.8 163 chr3R 17101093 intron cher - chr3R 17101174 intron cher - chr3R 17101256 intron cher - chr3R_20_17100001 chr3R_17100001 RAL-853_125b 3231 chr3R 17138800 17138877 chr3R 17138940 17139017 34 140 6.5 6.5 6.5 4.5 217 chr3R 17138800 3` UTR CG5255 + chr3R 17138908 intergenic CG5255 +,CG5265 + chr3R 17139017 5` UTR CG5265 + chr3R_34_17135001 chr3R_17135001 RAL-853_125b 3232 chr3R 17147895 17147941 chr3R 17148025 17148071 4 130 5.0 0.0 2.5 1.1 176 chr3R 17147895 intron m-cup - chr3R 17147983 intron m-cup - chr3R 17148071 intron m-cup - chr3R_4_17145001 chr3R_17145001 RAL-853_125b 3233 chr3R 17176236 17176253 chr3R 17176372 17176389 5 136 13.5 6.0 9.8 0.5 153 chr3R 17176236 intron Mur89F - chr3R 17176312 intron Mur89F - chr3R 17176389 intron Mur89F - chr3R_5_17175001 chr3R_17175001 RAL-853_125b 3234 chr3R 17184537 17184753 chr3R 17184685 17184879 49 136 0.5 0.0 0.2 40.8 342 chr3R 17184537 intron Mur89F - chr3R 17184708 intron Mur89F - chr3R 17184879 intron Mur89F - chr3R_49_17180001 chr3R_17180001 RAL-853_125b 3235 chr3R 17208814 17208820 chr3R 17208940 17208946 4 126 15.0 4.5 9.8 0.4 132 chr3R 17208814 intergenic not near genes chr3R 17208880 intergenic not near genes chr3R 17208946 intergenic not near genes chr3R_4_17205001 chr3R_17205001 RAL-853_125b 3236 chr3R 17209664 17209703 chr3R 17209802 17209841 16 138 9.0 13.0 11.0 1.3 177 chr3R 17209664 intergenic not near genes chr3R 17209752 intergenic not near genes chr3R 17209841 intergenic not near genes chr3R_16_17205001 chr3R_17205001 RAL-853_125b 3237 chr3R 17260650 17260661 chr3R 17260776 17260787 7 126 7.0 7.0 7.0 0.9 137 chr3R 17260650 intron beat-IIb - chr3R 17260718 intron beat-IIb - chr3R 17260787 intron beat-IIb - chr3R_7_17260001 chr3R_17260001 RAL-853_125b 3238 chr3R 17268623 17268700 chr3R 17268795 17268872 22 172 2.0 9.5 5.8 3.2 249 chr3R 17268623 intergenic not near genes chr3R 17268748 intergenic not near genes chr3R 17268872 intergenic not near genes chr3R_22_17265001 chr3R_17265001 RAL-853_125b 3239 chr3R 17346059 17346123 chr3R 17346187 17346251 30 126 7.0 7.5 7.2 3.7 192 chr3R 17346059 5` UTR beat-IIa - chr3R 17346155 intron beat-IIa - chr3R 17346251 intron beat-IIa - chr3R_30_17345001 chr3R_17345001 RAL-853_125b 3240 chr3R 17346653 17346707 chr3R 17348266 17348320 F-element 18 1613 8.0 10.0 9.0 1.8 1667 chr3R 17346653 intron beat-IIa - chr3R 17347486 intron beat-IIa - chr3R 17348320 intron beat-IIa - chr3R_18_17345001 chr3R_17345001 RAL-853_125b 3241 chr3R 17354761 17354829 chr3R 17355030 17355096 26 268 7.5 7.0 7.2 3.2 335 chr3R 17354761 intron beat-IIa - chr3R 17354928 intron beat-IIa - chr3R 17355096 intron beat-IIa - chr3R_26_17350001 chr3R_17350001 RAL-853_125b 3242 chr3R 17355445 17355518 chr3R 17355573 17355646 31 128 8.0 7.0 7.5 3.6 201 chr3R 17355445 intron beat-IIa - chr3R 17355546 intron beat-IIa - chr3R 17355646 intron beat-IIa - chr3R_31_17355001 chr3R_17355001 RAL-853_125b 3243 chr3R 17371377 17371422 chr3R 17371482 17371512 4 90 6.0 5.5 5.8 0.6 135 chr3R 17371377 3` UTR CR44256 - chr3R 17371444 3` UTR CR44256 - chr3R 17371512 3` UTR CR44256 - chr3R_4_17370001 chr3R_17370001 RAL-853_125b 3244 chr3R 17391207 17391281 chr3R 17391348 17391422 27 141 9.5 6.0 7.8 3.1 215 chr3R 17391207 5` UTR Brf - chr3R 17391314 5` UTR Brf - chr3R 17391422 intergenic CR44160 -,Brf -,sds22 + chr3R_27_17390001 chr3R_17390001 RAL-853_125b 3245 chr3R 17406952 17407032 chr3R 17407104 17407184 30 151 4.5 6.0 5.2 4.8 232 chr3R 17406952 intron CG42798 + chr3R 17407068 5` UTR CG42798 + chr3R 17407184 exon CG42798 + chr3R_30_17405001 chr3R_17405001 RAL-853_125b 3246 chr3R 17461153 17461226 chr3R 17461285 17461358 33 132 5.5 5.0 5.2 5.3 205 chr3R 17461153 intergenic not near genes chr3R 17461256 intergenic not near genes chr3R 17461358 intergenic not near genes chr3R_33_17460001 chr3R_17460001 RAL-853_125b 3247 chr3R 17467450 17467518 chr3R 17467578 17467647 26 128 7.0 9.0 8.0 2.9 197 chr3R 17467450 intergenic not near genes chr3R 17467548 intergenic not near genes chr3R 17467647 intergenic not near genes chr3R_26_17465001 chr3R_17465001 RAL-853_125b 3248 chr3R 17506339 17506392 chr3R 17506467 17506520 15 128 3.0 9.5 6.2 2.1 181 chr3R 17506339 intergenic not near genes chr3R 17506430 intergenic not near genes chr3R 17506520 intergenic not near genes chr3R_15_17505001 chr3R_17505001 RAL-853_125b 3249 chr3R 17509207 17509232 chr3R 17516812 17516836 412 16 7603 7.0 12.0 9.5 1.5 7629 chr3R 17509207 intergenic not near genes chr3R 17513022 intergenic not near genes chr3R 17516836 intergenic not near genes chr3R_16_17510001 chr3R_17510001 RAL-853_125b 3250 chr3R 17509234 17509250 chr3R 17516811 17516830 412 12 7594 3.0 12.0 7.5 1.4 7596 chr3R 17509234 intergenic not near genes chr3R 17513032 intergenic not near genes chr3R 17516830 intergenic not near genes chr3R_12_17510001 chr3R_17510001 RAL-853_125b 3251 chr3R 17519685 17519768 chr3R 17519830 17519909 19 142 4.5 5.0 4.8 3.3 224 chr3R 17519685 intergenic not near genes chr3R 17519797 intergenic not near genes chr3R 17519909 intergenic not near genes chr3R_19_17515001 chr3R_17515001 RAL-853_125b 3252 chr3R 17522222 17522254 chr3R 17522407 17522438 12 184 5.0 6.0 5.5 1.8 216 chr3R 17522222 intergenic not near genes chr3R 17522330 intergenic not near genes chr3R 17522438 intergenic not near genes chr3R_12_17520001 chr3R_17520001 RAL-853_125b 3253 chr3R 17586140 17586160 chr3R 17586267 17586294 11 131 9.0 9.5 9.2 1.1 154 chr3R 17586140 intergenic not near genes chr3R 17586217 intergenic not near genes chr3R 17586294 intergenic not near genes chr3R_11_17585001 chr3R_17585001 RAL-853_125b 3254 chr3R 17586163 17586180 chr3R 17586265 17586314 12 122 5.0 9.5 7.2 1.5 151 chr3R 17586163 intergenic not near genes chr3R 17586238 intergenic not near genes chr3R 17586314 intergenic not near genes chr3R_12_17585001 chr3R_17585001 RAL-853_125b 3255 chr3R 17591250 17591275 chr3R 17591736 17591761 F-element 9 486 21.5 7.5 14.5 0.6 511 chr3R 17591250 intergenic not near genes chr3R 17591506 intergenic not near genes chr3R 17591761 intergenic not near genes chr3R_9_17590001 chr3R_17590001 RAL-853_125b 3256 chr3R 17591277 17591321 chr3R 17591727 17591785 F-element 13 480 10.5 5.5 8.0 1.4 508 chr3R 17591277 intergenic not near genes chr3R 17591531 intergenic not near genes chr3R 17591785 intergenic not near genes chr3R_13_17590001 chr3R_17590001 RAL-853_125b 3257 chr3R 17638274 17638336 chr3R 17638810 17638872 roo 18 536 6.0 11.5 8.8 1.8 598 chr3R 17638274 intron CG43175 + chr3R 17638573 intron CG43175 + chr3R 17638872 intron,intron CG43175 +,CR45222 + chr3R_18_17635001 chr3R_17635001 RAL-853_125b 3258 chr3R 17653041 17653105 chr3R 17653181 17653245 8 139 18.5 15.0 16.8 0.4 204 chr3R 17653041 intron,intron CG14322 +,CR45223 - chr3R 17653143 intron,intron CG14322 +,CR45223 - chr3R 17653245 intron,intron CG14322 +,CR45223 - chr3R_8_17650001 chr3R_17650001 RAL-853_125b 3259 chr3R 17655414 17655480 chr3R 17655559 17655625 9 145 8.0 8.5 8.2 1.0 211 chr3R 17655414 intron CG14322 + chr3R 17655520 intron CG14322 + chr3R 17655625 intron CG14322 + chr3R_9_17655001 chr3R_17655001 RAL-853_125b 3260 chr3R 17657580 17657657 chr3R 17657781 17657858 INE-1 16 200 0.0 10.5 5.2 2.6 278 chr3R 17657580 intron CG14322 + chr3R 17657719 intron CG14322 + chr3R 17657858 intron CG14322 + chr3R_16_17655001 chr3R_17655001 RAL-853_125b 3261 chr3R 17734082 17734132 chr3R 17734221 17734270 11 135 41.5 36.5 39.0 0.3 188 chr3R 17734082 exon CG14321 + chr3R 17734176 3` UTR CG14321 + chr3R 17734270 3` UTR CG14321 + chr3R_11_17730001 chr3R_17730001 RAL-853_125b 3262 chr3R 17734803 17734849 chr3R 17734967 17735013 7 164 6.0 5.5 5.8 1.0 210 chr3R 17734803 intergenic CG14321 + chr3R 17734908 intergenic not near genes chr3R 17735013 intergenic not near genes chr3R_7_17730001 chr3R_17730001 RAL-853_125b 3263 chr3R 17746553 17746626 chr3R 17746679 17746694 4 112 9.0 9.0 9.0 0.4 141 chr3R 17746553 3` UTR TyrRII + chr3R 17746624 3` UTR TyrRII + chr3R 17746694 3` UTR TyrRII + chr3R_4_17745001 chr3R_17745001 RAL-853_125b 3264 chr3R 17812048 17812115 chr3R 17812174 17812241 10 126 30.0 32.5 31.2 0.3 193 chr3R 17812048 intron tinc + chr3R 17812144 intron tinc + chr3R 17812241 intron tinc + chr3R_10_17810001 chr3R_17810001 RAL-853_125b 3265 chr3R 17823162 17823234 chr3R 17823297 17823369 26 135 4.0 6.5 5.2 4.2 207 chr3R 17823162 intron tinc + chr3R 17823266 intron tinc + chr3R 17823369 intron tinc + chr3R_26_17820001 chr3R_17820001 RAL-853_125b 3266 chr3R 17851695 17851784 chr3R 17851901 17851987 6 206 6.0 9.5 7.8 0.7 292 chr3R 17851695 intron tinc + chr3R 17851841 intron tinc + chr3R 17851987 5` UTR tinc + chr3R_6_17850001 chr3R_17850001 RAL-853_125b 3267 chr3R 17856001 17856030 chr3R 17856146 17856181 6 149 17.5 4.0 10.8 0.5 180 chr3R 17856001 intron tinc + chr3R 17856091 intron tinc + chr3R 17856181 intron tinc + chr3R_6_17855001 chr3R_17855001 RAL-853_125b 3268 chr3R 17856031 17856047 chr3R 17856142 17856198 5 142 14.5 3.5 9.0 0.5 167 chr3R 17856031 intron tinc + chr3R 17856114 intron tinc + chr3R 17856198 intron tinc + chr3R_5_17855001 chr3R_17855001 RAL-853_125b 3269 chr3R 17898322 17898354 chr3R 17898454 17898486 22 130 9.5 19.5 14.5 1.4 164 chr3R 17898322 intron Rim - chr3R 17898404 intron Rim - chr3R 17898486 intron Rim - chr3R_22_17895001 chr3R_17895001 RAL-853_125b 3270 chr3R 17899045 17899058 chr3R 17899173 17899186 4 128 13.0 6.0 9.5 0.4 141 chr3R 17899045 intron Rim - chr3R 17899116 intron Rim - chr3R 17899186 intron Rim - chr3R_4_17895001 chr3R_17895001 RAL-853_125b 3271 chr3R 17925810 17925861 chr3R 17927327 17927362 hobo 16 1514 13.0 7.0 10.0 1.5 1552 chr3R 17925810 intron cpo + chr3R 17926586 intron cpo + chr3R 17927362 intron cpo + chr3R_16_17925001 chr3R_17925001 RAL-853_125b 3272 chr3R 17960649 17960693 chr3R 17960884 17960919 5 224 6.5 8.5 7.5 0.6 270 chr3R 17960649 intron cpo + chr3R 17960784 intron cpo + chr3R 17960919 intron cpo + chr3R_5_17960001 chr3R_17960001 RAL-853_125b 3273 chr3R 17960694 17960713 chr3R 17960873 17960948 17 212 4.0 7.5 5.8 2.5 254 chr3R 17960694 intron cpo + chr3R 17960821 intron cpo + chr3R 17960948 intron cpo + chr3R_17_17960001 chr3R_17960001 RAL-853_125b 3274 chr3R 17976487 17976528 chr3R 17976650 17976696 7 167 12.5 0.0 6.2 1.0 209 chr3R 17976487 intron cpo + chr3R 17976592 intron cpo + chr3R 17976696 intron cpo + chr3R_7_17975001 chr3R_17975001 RAL-853_125b 3275 chr3R 17987725 17987794 chr3R 17987876 17987945 27 151 7.0 5.5 6.2 3.8 220 chr3R 17987725 intron cpo + chr3R 17987835 intron cpo + chr3R 17987945 intron cpo + chr3R_27_17985001 chr3R_17985001 RAL-853_125b 3276 chr3R 18006385 18006391 chr3R 18006522 18006528 4 137 21.0 13.5 17.2 0.2 143 chr3R 18006385 intron cpo + chr3R 18006456 intron cpo + chr3R 18006528 intron cpo + chr3R_4_18005001 chr3R_18005001 RAL-853_125b 3277 chr3R 18006395 18006451 chr3R 18006519 18006576 6 130 8.0 11.5 9.8 0.6 181 chr3R 18006395 intron cpo + chr3R 18006486 intron cpo + chr3R 18006576 intron cpo + chr3R_6_18005001 chr3R_18005001 RAL-853_125b 3278 chr3R 18030427 18030471 chr3R 18030561 18030605 10 134 6.0 2.5 4.2 1.9 178 chr3R 18030427 intergenic not near genes chr3R 18030516 intergenic not near genes chr3R 18030605 intergenic not near genes chr3R_10_18030001 chr3R_18030001 RAL-853_125b 3279 chr3R 18032735 18032808 chr3R 18040458 18040531 opus 19 7723 3.5 8.5 6.0 2.7 7796 chr3R 18032735 intergenic not near genes chr3R 18036633 intergenic not near genes chr3R 18040531 intergenic not near genes chr3R_19_18035001 chr3R_18035001 RAL-853_125b 3280 chr3R 18061394 18061448 chr3R 18061536 18061590 16 142 5.0 0.0 2.5 4.6 196 chr3R 18061394 intergenic not near genes chr3R 18061492 intergenic not near genes chr3R 18061590 intergenic not near genes chr3R_16_18060001 chr3R_18060001 RAL-853_125b 3281 chr3R 18061576 18061584 chr3R 18063200 18063208 F-element 4 1624 0.0 6.5 3.2 1.0 1632 chr3R 18061576 intergenic not near genes chr3R 18062392 intergenic not near genes chr3R 18063208 intergenic not near genes chr3R_4_18060001 chr3R_18060001 RAL-853_125b 3282 chr3R 18065627 18065666 chr3R 18065780 18065827 8 160 3.0 10.0 6.5 1.1 200 chr3R 18065627 intergenic not near genes chr3R 18065727 intergenic not near genes chr3R 18065827 intergenic not near genes chr3R_8_18065001 chr3R_18065001 RAL-853_125b 3283 chr3R 18107124 18107139 chr3R 18107257 18107272 6 133 0.0 11.0 5.5 0.9 148 chr3R 18107124 intron sr + chr3R 18107198 intron sr + chr3R 18107272 intron sr + chr3R_6_18105001 chr3R_18105001 RAL-853_125b 3284 chr3R 18117380 18117413 chr3R 18117498 18117539 9 123 7.0 9.0 8.0 1.0 159 chr3R 18117380 intron sr + chr3R 18117460 intron sr + chr3R 18117539 intron sr + chr3R_9_18115001 chr3R_18115001 RAL-853_125b 3285 chr3R 18119694 18119742 chr3R 18119821 18119869 12 124 4.0 0.5 2.2 3.8 175 chr3R 18119694 intron sr + chr3R 18119782 intron sr + chr3R 18119869 intron sr + chr3R_12_18115001 chr3R_18115001 RAL-853_125b 3286 chr3R 18122839 18122911 chr3R 18122967 18123038 9 127 4.5 3.5 4.0 1.8 199 chr3R 18122839 intron sr + chr3R 18122938 intron sr + chr3R 18123038 intron sr + chr3R_9_18120001 chr3R_18120001 RAL-853_125b 3287 chr3R 18157558 18157617 chr3R 18157715 18157775 8 158 0.0 9.0 4.5 1.5 217 chr3R 18157558 intergenic CR45103 + chr3R 18157666 intergenic CR45103 + chr3R 18157775 5` UTR CR45103 + chr3R_8_18155001 chr3R_18155001 RAL-853_125b 3288 chr3R 18211739 18211806 chr3R 18211914 18211980 6 175 0.0 5.0 2.5 1.7 241 chr3R 18211739 intron CG7985 + chr3R 18211860 intron CG7985 + chr3R 18211980 intron CG7985 + chr3R_6_18210001 chr3R_18210001 RAL-853_125b 3289 chr3R 18215438 18215450 chr3R 18377696 18377708 5 162258 7.5 0.0 3.8 1.0 162270 chr3R 18215438 intergenic CG7985 + chr3R 18296573 intron l(3)05822 - chr3R 18377708 intergenic CG7675 - chr3R_5_18295001 chr3R_18295001 RAL-853_125b 3290 chr3R 18215580 18215584 chr3R 18295909 18295913 4 80329 0.0 38.0 19.0 0.2 80333 chr3R 18215580 intergenic not near genes chr3R 18255746 5` UTR,exon Tgs1 +,moi + chr3R 18295913 intron l(3)05822 - chr3R_4_18255001 chr3R_18255001 RAL-853_125b 3291 chr3R 18302966 18302979 chr3R 18303113 18303133 8 153 9.5 0.0 4.8 1.4 167 chr3R 18302966 intergenic CG7126 -,PKD - chr3R 18303050 intergenic CG7126 -,PKD - chr3R 18303133 intergenic PKD -,CG7126 - chr3R_8_18300001 chr3R_18300001 RAL-853_125b 3292 chr3R 18352539 18352596 chr3R 18352682 18352739 17 143 5.0 10.0 7.5 2.0 200 chr3R 18352539 intron CG15803 - chr3R 18352639 intron CG15803 - chr3R 18352739 3` UTR CG15803 - chr3R_17_18350001 chr3R_18350001 RAL-853_125b 3293 chr3R 18429092 18429100 chr3R 18429228 18429236 6 136 22.5 9.5 16.0 0.4 144 chr3R 18429092 intron fru - chr3R 18429164 intron fru - chr3R 18429236 intron fru - chr3R_6_18425001 chr3R_18425001 RAL-853_125b 3294 chr3R 18481147 18481204 chr3R 18481286 18481338 17 137 0.0 9.0 4.5 3.1 191 chr3R 18481147 intron fru - chr3R 18481242 intron fru - chr3R 18481338 intron fru - chr3R_17_18480001 chr3R_18480001 RAL-853_125b 3295 chr3R 18485280 18485353 chr3R 18485430 18485503 12 150 3.5 5.0 4.2 2.3 223 chr3R 18485280 intron fru - chr3R 18485392 intron fru - chr3R 18485503 intron fru - chr3R_12_18485001 chr3R_18485001 RAL-853_125b 3296 chr3R 18496623 18496646 chr3R 18496752 18496775 5 129 4.5 5.5 5.0 0.8 152 chr3R 18496623 intron fru - chr3R 18496699 intron fru - chr3R 18496775 intron fru - chr3R_5_18495001 chr3R_18495001 RAL-853_125b 3297 chr3R 18500700 18500735 chr3R 18500864 18500906 13 169 4.5 18.5 11.5 1.0 206 chr3R 18500700 intron fru - chr3R 18500803 intron fru - chr3R 18500906 intron fru - chr3R_13_18500001 chr3R_18500001 RAL-853_125b 3298 chr3R 18501550 18501615 chr3R 18501681 18501746 35 131 8.5 12.5 10.5 3.0 196 chr3R 18501550 intron fru - chr3R 18501648 intron fru - chr3R 18501746 intron fru - chr3R_35_18500001 chr3R_18500001 RAL-853_125b 3299 chr3R 18541487 18541550 chr3R 18541613 18541676 27 125 10.0 8.5 9.2 2.6 189 chr3R 18541487 intron fru - chr3R 18541582 intron fru - chr3R 18541676 intron fru - chr3R_27_18540001 chr3R_18540001 RAL-853_125b 3300 chr3R 18562528 18562569 chr3R 18562697 18562738 11 169 5.5 4.0 4.8 1.9 210 chr3R 18562528 intergenic not near genes chr3R 18562633 intergenic not near genes chr3R 18562738 intergenic not near genes chr3R_11_18560001 chr3R_18560001 RAL-853_125b 3301 chr3R 18579527 18579544 chr3R 18579654 18579671 5 126 12.0 1.5 6.8 0.6 144 chr3R 18579527 intron,intron CG7694 +,fray + chr3R 18579599 intron,intron CG7694 +,fray + chr3R 18579671 intron,intron CG7694 +,fray + chr3R_5_18575001 chr3R_18575001 RAL-853_125b 3302 chr3R 18606459 18606521 chr3R 18610737 18610803 F-element 19 4281 10.5 4.0 7.2 2.3 4344 chr3R 18606459 intron,intron qin +,CG14304 - chr3R 18608631 intron,intron qin +,CG14304 - chr3R 18610803 intron,intron qin +,CG14304 - chr3R_19_18605001 chr3R_18605001 RAL-853_125b 3303 chr3R 18781647 18781717 chr3R 18781773 18781843 26 123 9.0 4.5 6.8 3.3 196 chr3R 18781647 intron CG7720 - chr3R 18781745 intron CG7720 - chr3R 18781843 intron CG7720 - chr3R_26_18780001 chr3R_18780001 RAL-853_125b 3304 chr3R 18784027 18784106 chr3R 18784623 18784637 37 593 6.0 5.0 5.5 5.7 610 chr3R 18784027 intron CG7720 - chr3R 18784332 intron CG7720 - chr3R 18784637 intron CG7720 - chr3R_37_18780001 chr3R_18780001 RAL-853_125b 3305 chr3R 18791459 18791516 chr3R 18791588 18791588 5 114 6.0 5.0 5.5 0.8 129 chr3R 18791459 intron CG7720 - chr3R 18791524 intron CG7720 - chr3R 18791588 intron CG7720 - chr3R_5_18790001 chr3R_18790001 RAL-853_125b 3306 chr3R 18792755 18792833 chr3R 18792887 18792966 15 133 2.0 0.0 1.0 7.5 211 chr3R 18792755 intron CG7720 - chr3R 18792860 intron CG7720 - chr3R 18792966 intron CG7720 - chr3R_15_18790001 chr3R_18790001 RAL-853_125b 3307 chr3R 18807279 18807318 chr3R 18807405 18807428 12 123 9.5 0.0 4.8 2.1 149 chr3R 18807279 exon CG18208 - chr3R 18807354 intron CG18208 - chr3R 18807428 intron CG18208 - chr3R_12_18805001 chr3R_18805001 RAL-853_125b 3308 chr3R 18812027 18812101 chr3R 18812155 18812229 23 128 16.5 9.5 13.0 1.6 202 chr3R 18812027 intron CG18208 - chr3R 18812128 intron CG18208 - chr3R 18812229 intron CG18208 - chr3R_23_18810001 chr3R_18810001 RAL-853_125b 3309 chr3R 18817484 18817538 chr3R 18817632 18817696 19 149 0.0 0.0 0.0 19.0 212 chr3R 18817484 intron CG18208 - chr3R 18817590 intron CG18208 - chr3R 18817696 intron CG18208 - chr3R_19_18815001 chr3R_18815001 RAL-853_125b 3310 chr3R 18839761 18839831 chr3R 18839895 18839956 29 132 9.0 4.0 6.5 3.9 195 chr3R 18839761 intron CG18208 - chr3R 18839858 intron CG18208 - chr3R 18839956 intron CG18208 - chr3R_29_18835001 chr3R_18835001 RAL-853_125b 3311 chr3R 18856293 18856359 chr3R 18856633 18856699 29 334 7.5 4.5 6.0 4.1 406 chr3R 18856293 intergenic not near genes chr3R 18856496 intergenic not near genes chr3R 18856699 intergenic not near genes chr3R_29_18855001 chr3R_18855001 RAL-853_125b 3312 chr3R 18868570 18868612 chr3R 18868701 18868702 20 123 15.0 16.5 15.8 1.2 132 chr3R 18868570 intergenic not near genes chr3R 18868636 intergenic not near genes chr3R 18868702 intergenic not near genes chr3R_20_18865001 chr3R_18865001 RAL-853_125b 3313 chr3R 18887551 18887590 chr3R 18887682 18887721 18 130 16.0 11.0 13.5 1.2 170 chr3R 18887551 intergenic not near genes chr3R 18887636 intergenic not near genes chr3R 18887721 intergenic not near genes chr3R_18_18885001 chr3R_18885001 RAL-853_125b 3314 chr3R 18890020 18890046 chr3R 18890148 18890171 12 124 19.0 11.5 15.2 0.7 151 chr3R 18890020 intergenic not near genes chr3R 18890096 intergenic not near genes chr3R 18890171 intergenic not near genes chr3R_12_18890001 chr3R_18890001 RAL-853_125b 3315 chr3R 18890048 18890086 chr3R 18890143 18890214 29 121 10.0 10.0 10.0 2.6 166 chr3R 18890048 intergenic not near genes chr3R 18890131 intergenic not near genes chr3R 18890214 intergenic not near genes chr3R_29_18890001 chr3R_18890001 RAL-853_125b 3316 chr3R 18897560 18897584 chr3R 18897686 18897710 9 126 8.0 7.5 7.8 1.0 150 chr3R 18897560 intergenic not near genes chr3R 18897635 intergenic CG14297 + chr3R 18897710 intergenic CG14297 + chr3R_9_18895001 chr3R_18895001 RAL-853_125b 3317 chr3R 18901632 18901695 chr3R 18901764 18901827 35 129 8.5 9.0 8.8 3.6 195 chr3R 18901632 intergenic CG14294 - chr3R 18901730 3` UTR CG14294 - chr3R 18901827 exon CG14294 - chr3R_35_18900001 chr3R_18900001 RAL-853_125b 3318 chr3R 18915898 18915964 chr3R 18916102 18916168 27 202 10.0 5.0 7.5 3.2 270 chr3R 18915898 5` UTR Xrp1 + chr3R 18916033 intron Xrp1 + chr3R 18916168 intron Xrp1 + chr3R_27_18915001 chr3R_18915001 RAL-853_125b 3319 chr3R 18932512 18932524 chr3R 18932737 18932749 6 224 23.5 12.0 17.8 0.3 237 chr3R 18932512 intron CG42613 + chr3R 18932630 intron CG42613 + chr3R 18932749 intron CG42613 + chr3R_6_18930001 chr3R_18930001 RAL-853_125b 3320 chr3R 18932525 18932578 chr3R 18932729 18932801 21 209 9.5 11.0 10.2 1.9 276 chr3R 18932525 intron CG42613 + chr3R 18932663 intron CG42613 + chr3R 18932801 intron CG42613 + chr3R_21_18930001 chr3R_18930001 RAL-853_125b 3321 chr3R 19082487 19082559 chr3R 19082618 19082688 25 129 6.0 7.0 6.5 3.3 201 chr3R 19082487 intron cdi - chr3R 19082588 intron cdi - chr3R 19082688 intron cdi - chr3R_25_19080001 chr3R_19080001 RAL-853_125b 3322 chr3R 19136406 19136472 chr3R 19139742 19139809 Bari1 29 3342 102.5 44.0 73.2 0.4 3403 chr3R 19136406 exon Cyp12a4 + chr3R 19138108 intergenic not near genes chr3R 19139809 3` UTR Ppcs - chr3R_29_19135001 chr3R_19135001 RAL-853_125b 3323 chr3R 19178092 19178165 chr3R 19178237 19178310 22 141 7.0 9.0 8.0 2.4 218 chr3R 19178092 3` UTR CG5555 - chr3R 19178201 3` UTR CG5555 - chr3R 19178310 exon CG5555 - chr3R_22_19175001 chr3R_19175001 RAL-853_125b 3324 chr3R 19192916 19193005 chr3R 19197280 19197320 F-element 9 4347 0.0 4.5 2.2 2.8 4404 chr3R 19192916 intron CG31475 + chr3R 19195118 intron CG31475 + chr3R 19197320 intron CG31475 + chr3R_9_19195001 chr3R_19195001 RAL-853_125b 3325 chr3R 19208648 19208658 chr3R 19208785 19208795 8 137 13.0 0.0 6.5 1.1 147 chr3R 19208648 intergenic not near genes chr3R 19208722 intergenic not near genes chr3R 19208795 intergenic not near genes chr3R_8_19205001 chr3R_19205001 RAL-853_125b 3326 chr3R 19276881 19276949 chr3R 19277011 19277079 15 130 4.5 0.0 2.2 4.7 198 chr3R 19276881 intergenic not near genes chr3R 19276980 intergenic not near genes chr3R 19277079 intergenic not near genes chr3R_15_19275001 chr3R_19275001 RAL-853_125b 3327 chr3R 19337193 19337204 chr3R 19337320 19337331 6 127 14.0 27.0 20.5 0.3 138 chr3R 19337193 intergenic not near genes chr3R 19337262 intergenic not near genes chr3R 19337331 intergenic not near genes chr3R_6_19335001 chr3R_19335001 RAL-853_125b 3328 chr3R 19344626 19344690 chr3R 19344809 19344875 18 185 4.5 6.5 5.5 2.8 249 chr3R 19344626 intergenic not near genes chr3R 19344750 intergenic not near genes chr3R 19344875 intergenic not near genes chr3R_18_19340001 chr3R_19340001 RAL-853_125b 3329 chr3R 19563675 19563697 chr3R 19563803 19563825 16 128 18.0 6.5 12.2 1.2 150 chr3R 19563675 intron Dys + chr3R 19563750 intron Dys + chr3R 19563825 intron Dys + chr3R_16_19560001 chr3R_19560001 RAL-853_125b 3330 chr3R 19563698 19563739 chr3R 19563800 19563867 14 126 9.5 7.0 8.2 1.5 169 chr3R 19563698 intron Dys + chr3R 19563782 intron Dys + chr3R 19563867 intron Dys + chr3R_14_19560001 chr3R_19560001 RAL-853_125b 3331 chr3R 19564943 19564998 chr3R 19565072 19565127 12 129 7.5 4.5 6.0 1.7 184 chr3R 19564943 intron Dys + chr3R 19565035 intron Dys + chr3R 19565127 intron Dys + chr3R_12_19565001 chr3R_19565001 RAL-853_125b 3332 chr3R 19602524 19602541 chr3R 19602654 19602671 10 130 19.0 5.5 12.2 0.8 147 chr3R 19602524 exon CG7333 + chr3R 19602598 3` UTR CG7333 + chr3R 19602671 intergenic CG7333 + chr3R_10_19600001 chr3R_19600001 RAL-853_125b 3333 chr3R 19602544 19602599 chr3R 19602652 19602729 13 128 4.5 5.0 4.8 2.2 185 chr3R 19602544 exon CG7333 + chr3R 19602636 intergenic CG7333 + chr3R 19602729 intergenic CG7333 + chr3R_13_19600001 chr3R_19600001 RAL-853_125b 3334 chr3R 19667947 19668019 chr3R 19668076 19668152 17 132 3.5 6.5 5.0 2.8 205 chr3R 19667947 intron CG7432 + chr3R 19668050 intron CG7432 + chr3R 19668152 intron CG7432 + chr3R_17_19665001 chr3R_19665001 RAL-853_125b 3335 chr3R 19681559 19681625 chr3R 19681699 19681766 26 141 6.5 12.0 9.2 2.5 207 chr3R 19681559 intron Naam + chr3R 19681662 intron Naam + chr3R 19681766 intron Naam + chr3R_26_19680001 chr3R_19680001 RAL-853_125b 3336 chr3R 19683204 19683271 chr3R 19683407 19683474 25 198 7.5 5.5 6.5 3.3 270 chr3R 19683204 intron Naam + chr3R 19683339 intron Naam + chr3R 19683474 intron Naam + chr3R_25_19680001 chr3R_19680001 RAL-853_125b 3337 chr3R 19716160 19716184 chr3R 19716291 19716315 5 131 10.0 3.0 6.5 0.7 155 chr3R 19716160 intergenic CG34286 - chr3R 19716238 intergenic CG34286 - chr3R 19716315 intergenic CG34286 - chr3R_5_19715001 chr3R_19715001 RAL-853_125b 3338 chr3R 19733975 19734008 chr3R 19734103 19734136 12 128 4.0 8.5 6.2 1.7 161 chr3R 19733975 intron GluClalpha + chr3R 19734056 intron GluClalpha + chr3R 19734136 intron GluClalpha + chr3R_12_19730001 chr3R_19730001 RAL-853_125b 3339 chr3R 19744203 19744211 chr3R 19749498 19749507 Rt1a 5 5296 26.0 13.5 19.8 0.2 5304 chr3R 19744203 intron,intron GluClalpha +,CR43488 - chr3R 19746855 intron GluClalpha + chr3R 19749507 intron GluClalpha + chr3R_5_19745001 chr3R_19745001 RAL-853_125b 3340 chr3R 19755378 19755452 chr3R 19755523 19755597 34 144 4.5 7.0 5.8 5.0 219 chr3R 19755378 intron GluClalpha + chr3R 19755488 intron GluClalpha + chr3R 19755597 intron GluClalpha + chr3R_34_19755001 chr3R_19755001 RAL-853_125b 3341 chr3R 19782981 19783039 chr3R 19783148 19783206 13 167 8.0 5.0 6.5 1.7 225 chr3R 19782981 exon CG11407 + chr3R 19783094 3` UTR CG11407 + chr3R 19783206 intergenic CG11407 +,CG11453 + chr3R_13_19780001 chr3R_19780001 RAL-853_125b 3342 chr3R 19830838 19830883 chr3R 19830965 19831010 11 126 0.0 4.0 2.0 3.7 172 chr3R 19830838 intron bnl - chr3R 19830924 intron bnl - chr3R 19831010 intron bnl - chr3R_11_19830001 chr3R_19830001 RAL-853_125b 3343 chr3R 19839486 19839561 chr3R 19839768 19839799 36 278 5.0 8.5 6.8 4.6 313 chr3R 19839486 intergenic not near genes chr3R 19839642 intergenic not near genes chr3R 19839799 intergenic not near genes chr3R_36_19835001 chr3R_19835001 RAL-853_125b 3344 chr3R 19846910 19846993 chr3R 19847120 19847194 16 206 2.0 4.5 3.2 3.8 284 chr3R 19846910 intergenic CG4662 + chr3R 19847052 intergenic CG4662 + chr3R 19847194 intergenic CG4662 + chr3R_16_19845001 chr3R_19845001 RAL-853_125b 3345 chr3R 19915823 19915899 chr3R 19916062 19916112 29 230 8.5 5.5 7.0 3.6 289 chr3R 19915823 intergenic CG4465 -,CG42508 -,Xport - chr3R 19915968 3` UTR CG4465 - chr3R 19916112 exon CG4465 - chr3R_29_19915001 chr3R_19915001 RAL-853_125b 3346 chr3R 19930575 19930612 chr3R 19930709 19930746 4 134 1.0 11.0 6.0 0.6 171 chr3R 19930575 intron Hs6st - chr3R 19930660 intron Hs6st - chr3R 19930746 intron Hs6st - chr3R_4_19930001 chr3R_19930001 RAL-853_125b 3347 chr3R 20008779 20008843 chr3R 20008910 20008974 41 129 8.0 13.5 10.8 3.5 195 chr3R 20008779 intergenic MED25 +,Hs6st - chr3R 20008876 intergenic MED25 +,Hs6st - chr3R 20008974 5` UTR MED25 + chr3R_41_20005001 chr3R_20005001 RAL-853_125b 3348 chr3R 20059421 20059487 chr3R 20059551 20059617 21 129 8.0 9.0 8.5 2.2 196 chr3R 20059421 intron CG4390 - chr3R 20059519 intron CG4390 - chr3R 20059617 exon CG4390 - chr3R_21_20055001 chr3R_20055001 RAL-853_125b 3349 chr3R 20076331 20076359 chr3R 20076463 20076491 11 129 19.5 5.0 12.2 0.8 160 chr3R 20076331 intergenic not near genes chr3R 20076411 intergenic not near genes chr3R 20076491 intergenic not near genes chr3R_11_20075001 chr3R_20075001 RAL-853_125b 3350 chr3R 20076361 20076402 chr3R 20076458 20076534 12 128 9.5 6.0 7.8 1.4 173 chr3R 20076361 intergenic not near genes chr3R 20076448 intergenic not near genes chr3R 20076534 intergenic not near genes chr3R_12_20075001 chr3R_20075001 RAL-853_125b 3351 chr3R 20076989 20077060 chr3R 20077125 20077196 19 132 7.0 5.5 6.2 2.6 207 chr3R 20076989 intergenic not near genes chr3R 20077092 intergenic not near genes chr3R 20077196 intergenic not near genes chr3R_19_20075001 chr3R_20075001 RAL-853_125b 3352 chr3R 20109493 20109561 chr3R 20114749 20114817 copia 17 5254 3.5 8.0 5.8 2.5 5324 chr3R 20109493 intergenic not near genes chr3R 20112155 intergenic not near genes chr3R 20114817 intergenic CG10887 + chr3R_17_20110001 chr3R_20110001 RAL-853_125b 3353 chr3R 20132930 20132994 chr3R 20133056 20133115 12 126 4.0 3.0 3.5 2.7 185 chr3R 20132930 intergenic not near genes chr3R 20133022 intergenic not near genes chr3R 20133115 intergenic not near genes chr3R_12_20130001 chr3R_20130001 RAL-853_125b 3354 chr3R 20137557 20137580 chr3R 20137697 20137720 5 138 18.5 4.5 11.5 0.4 163 chr3R 20137557 intergenic not near genes chr3R 20137638 intergenic not near genes chr3R 20137720 intergenic not near genes chr3R_5_20135001 chr3R_20135001 RAL-853_125b 3355 chr3R 20137582 20137629 chr3R 20137692 20137729 13 125 7.5 4.0 5.8 1.9 147 chr3R 20137582 intergenic not near genes chr3R 20137656 intergenic not near genes chr3R 20137729 intergenic not near genes chr3R_13_20135001 chr3R_20135001 RAL-853_125b 3356 chr3R 20151258 20151328 chr3R 20151439 20151509 29 180 4.5 7.5 6.0 4.1 251 chr3R 20151258 intergenic not near genes chr3R 20151384 intergenic not near genes chr3R 20151509 intergenic not near genes chr3R_29_20150001 chr3R_20150001 RAL-853_125b 3357 chr3R 20156652 20156715 chr3R 20165872 20165935 roo 20 9219 5.5 8.0 6.8 2.6 9283 chr3R 20156652 intergenic not near genes chr3R 20161294 intergenic not near genes chr3R 20165935 intergenic not near genes chr3R_20_20160001 chr3R_20160001 RAL-853_125b 3358 chr3R 20193449 20193469 chr3R 20193588 20193608 6 139 5.0 6.0 5.5 0.9 159 chr3R 20193449 intergenic not near genes chr3R 20193528 intergenic not near genes chr3R 20193608 intergenic not near genes chr3R_6_20190001 chr3R_20190001 RAL-853_125b 3359 chr3R 20205361 20205393 chr3R 20205528 20205560 13 167 12.5 0.0 6.2 1.8 199 chr3R 20205361 intron Nlg4 + chr3R 20205460 intron Nlg4 + chr3R 20205560 intron Nlg4 + chr3R_13_20205001 chr3R_20205001 RAL-853_125b 3360 chr3R 20205395 20205589 chr3R 20205523 20205761 21 169 0.0 0.0 0.0 21.0 366 chr3R 20205395 intron Nlg4 + chr3R 20205578 intron Nlg4 + chr3R 20205761 intron Nlg4 + chr3R_21_20205001 chr3R_20205001 RAL-853_125b 3361 chr3R 20245236 20245292 chr3R 20248896 20248952 F-element 18 3659 5.5 1.0 3.2 4.3 3716 chr3R 20245236 3` UTR Nlg4 + chr3R 20247094 intergenic not near genes chr3R 20248952 intergenic not near genes chr3R_18_20245001 chr3R_20245001 RAL-853_125b 3362 chr3R 20252169 20252227 chr3R 20252297 20252355 7 128 1.5 0.0 0.8 3.9 186 chr3R 20252169 intergenic not near genes chr3R 20252262 intergenic not near genes chr3R 20252355 intergenic cic + chr3R_7_20250001 chr3R_20250001 RAL-853_125b 3363 chr3R 20256792 20256861 chr3R 20256918 20256989 18 127 0.0 5.5 2.8 4.7 197 chr3R 20256792 intron cic + chr3R 20256890 intron cic + chr3R 20256989 intron cic + chr3R_18_20255001 chr3R_20255001 RAL-853_125b 3364 chr3R 20266506 20266532 chr3R 20273027 20273053 Burdock 14 6521 0.5 15.0 7.8 1.6 6547 chr3R 20266506 intron cic + chr3R 20269780 intron cic + chr3R 20273053 intron cic + chr3R_14_20265001 chr3R_20265001 RAL-853_125b 3365 chr3R 20282225 20282289 chr3R 20282351 20282415 15 126 1.5 7.0 4.2 2.9 190 chr3R 20282225 intron cic + chr3R 20282320 intron cic + chr3R 20282415 intron cic + chr3R_15_20280001 chr3R_20280001 RAL-853_125b 3366 chr3R 20308144 20308205 chr3R 20308282 20308354 18 144 4.5 0.0 2.2 5.6 210 chr3R 20308144 intergenic not near genes chr3R 20308249 intergenic not near genes chr3R 20308354 intergenic not near genes chr3R_18_20305001 chr3R_20305001 RAL-853_125b 3367 chr3R 20312807 20312884 chr3R 20312943 20313020 26 136 9.5 3.5 6.5 3.5 213 chr3R 20312807 intron CG42668 + chr3R 20312914 intron CG42668 + chr3R 20313020 intron CG42668 + chr3R_26_20310001 chr3R_20310001 RAL-853_125b 3368 chr3R 20330959 20331021 chr3R 20331495 20331557 roo 19 535 11.5 6.5 9.0 1.9 598 chr3R 20330959 intergenic Sirt2 + chr3R 20331258 intergenic Sirt2 + chr3R 20331557 intergenic not near genes chr3R_19_20330001 chr3R_20330001 RAL-853_125b 3369 chr3R 20434793 20434864 chr3R 20435028 20435099 18 235 7.5 1.0 4.2 3.5 306 chr3R 20434793 intron Gfrl - chr3R 20434946 intron Gfrl - chr3R 20435099 intron Gfrl - chr3R_18_20430001 chr3R_20430001 RAL-853_125b 3370 chr3R 20472108 20472119 chr3R 20472240 20472250 6 132 20.0 2.0 11.0 0.5 142 chr3R 20472108 intron Gfrl - chr3R 20472179 intron Gfrl - chr3R 20472250 intron Gfrl - chr3R_6_20470001 chr3R_20470001 RAL-853_125b 3371 chr3R 20472133 20472186 chr3R 20472233 20472283 17 112 5.5 3.5 4.5 3.1 150 chr3R 20472133 intron Gfrl - chr3R 20472208 intron Gfrl - chr3R 20472283 intron Gfrl - chr3R_17_20470001 chr3R_20470001 RAL-853_125b 3372 chr3R 20487903 20487941 chr3R 20488062 20488103 10 160 14.0 11.0 12.5 0.7 200 chr3R 20487903 intergenic not near genes chr3R 20488003 intergenic not near genes chr3R 20488103 intergenic not near genes chr3R_10_20485001 chr3R_20485001 RAL-853_125b 3373 chr3R 20488967 20489037 chr3R 20489093 20489162 23 126 6.0 3.0 4.5 4.2 195 chr3R 20488967 intergenic not near genes chr3R 20489064 intergenic not near genes chr3R 20489162 intergenic not near genes chr3R_23_20485001 chr3R_20485001 RAL-853_125b 3374 chr3R 20506523 20506603 chr3R 20507387 20507456 BS 17 851 0.0 8.5 4.2 3.3 933 chr3R 20506523 intergenic Or92a + chr3R 20506990 intergenic CG4288 - chr3R 20507456 3` UTR CG4288 - chr3R_17_20505001 chr3R_20505001 RAL-853_125b 3375 chr3R 20512966 20513020 chr3R 20515719 20515773 opus 12 2753 7.5 4.5 6.0 1.7 2807 chr3R 20512966 intergenic CG4288 - chr3R 20514370 intergenic not near genes chr3R 20515773 intergenic not near genes chr3R_12_20510001 chr3R_20510001 RAL-853_125b 3376 chr3R 20516497 20516567 chr3R 20516903 20516974 25 407 6.0 9.0 7.5 2.9 477 chr3R 20516497 intergenic not near genes chr3R 20516736 intergenic not near genes chr3R 20516974 intergenic not near genes chr3R_25_20515001 chr3R_20515001 RAL-853_125b 3377 chr3R 20542888 20542898 chr3R 20543019 20543031 8 133 23.0 8.0 15.5 0.5 143 chr3R 20542888 intron Stat92E - chr3R 20542960 intron Stat92E - chr3R 20543031 intron Stat92E - chr3R_8_20540001 chr3R_20540001 RAL-853_125b 3378 chr3R 20542900 20542961 chr3R 20543018 20543044 30 123 9.5 8.0 8.8 3.1 144 chr3R 20542900 intron Stat92E - chr3R 20542972 intron Stat92E - chr3R 20543044 intron Stat92E - chr3R_30_20540001 chr3R_20540001 RAL-853_125b 3379 chr3R 20594441 20594509 chr3R 20594581 20594654 12 141 6.0 0.0 3.0 3.0 213 chr3R 20594441 intron bon + chr3R 20594548 intron bon + chr3R 20594654 intron bon + chr3R_12_20590001 chr3R_20590001 RAL-853_125b 3380 chr3R 20686913 20686989 chr3R 20687397 20687472 38 483 6.0 4.5 5.2 6.1 559 chr3R 20686913 intergenic not near genes chr3R 20687192 intergenic not near genes chr3R 20687472 intergenic not near genes chr3R_38_20685001 chr3R_20685001 RAL-853_125b 3381 chr3R 20707698 20707774 chr3R 20707963 20708039 28 265 6.0 7.5 6.8 3.6 341 chr3R 20707698 intron Oamb - chr3R 20707868 intron Oamb - chr3R 20708039 intron Oamb - chr3R_28_20705001 chr3R_20705001 RAL-853_125b 3382 chr3R 20722808 20722877 chr3R 20722985 20723054 23 171 10.0 3.5 6.8 2.9 246 chr3R 20722808 intergenic not near genes chr3R 20722931 intergenic not near genes chr3R 20723054 intergenic not near genes chr3R_23_20720001 chr3R_20720001 RAL-853_125b 3383 chr3R 20730878 20731042 chr3R 20731028 20731180 22 144 0.0 0.0 0.0 22.0 302 chr3R 20730878 intergenic not near genes chr3R 20731029 intergenic not near genes chr3R 20731180 intergenic CG31205 + chr3R_22_20730001 chr3R_20730001 RAL-853_125b 3384 chr3R 20731647 20731690 chr3R 20731955 20731998 10 308 10.0 5.5 7.8 1.1 351 chr3R 20731647 5` UTR CG31205 + chr3R 20731822 exon CG31205 + chr3R 20731998 exon CG31205 + chr3R_10_20730001 chr3R_20730001 RAL-853_125b 3385 chr3R 20733721 20733781 chr3R 20733863 20733923 27 141 18.0 16.5 17.2 1.5 202 chr3R 20733721 intergenic not near genes chr3R 20733822 intergenic not near genes chr3R 20733923 intergenic not near genes chr3R_27_20730001 chr3R_20730001 RAL-853_125b 3386 chr3R 20733783 20734015 chr3R 20733855 20734134 9 124 0.0 14.0 7.0 1.1 351 chr3R 20733783 intergenic not near genes chr3R 20733958 intergenic not near genes chr3R 20734134 intergenic not near genes chr3R_9_20730001 chr3R_20730001 RAL-853_125b 3387 chr3R 20767462 20767539 chr3R 20767606 20767655 14 139 7.5 3.5 5.5 2.2 193 chr3R 20767462 intron Syp + chr3R 20767558 intron Syp + chr3R 20767655 intron Syp + chr3R_14_20765001 chr3R_20765001 RAL-853_125b 3388 chr3R 20771709 20771713 chr3R 20771840 20771844 4 131 4.0 23.5 13.8 0.3 135 chr3R 20771709 intron,intron Syp +,Takl1 - chr3R 20771776 intron,intron Syp +,Takl1 - chr3R 20771844 intron,exon Syp +,Takl1 - chr3R_4_20770001 chr3R_20770001 RAL-853_125b 3389 chr3R 20787393 20787456 chr3R 20787533 20787597 19 140 9.0 9.5 9.2 1.9 204 chr3R 20787393 intron Syp + chr3R 20787495 intron Syp + chr3R 20787597 intron Syp + chr3R_19_20785001 chr3R_20785001 RAL-853_125b 3390 chr3R 20801092 20801157 chr3R 20801219 20801284 17 127 5.5 7.0 6.2 2.4 192 chr3R 20801092 intron Syp + chr3R 20801188 intron Syp + chr3R 20801284 intron Syp + chr3R_17_20800001 chr3R_20800001 RAL-853_125b 3391 chr3R 20806931 20806974 chr3R 20807101 20807144 13 170 7.5 11.5 9.5 1.2 213 chr3R 20806931 3` UTR Syp + chr3R 20807038 3` UTR Syp + chr3R 20807144 3` UTR Syp + chr3R_13_20805001 chr3R_20805001 RAL-853_125b 3392 chr3R 20848302 20848358 chr3R 20848442 20848498 13 140 0.5 7.5 4.0 2.6 196 chr3R 20848302 intergenic not near genes chr3R 20848400 intergenic not near genes chr3R 20848498 intergenic not near genes chr3R_13_20845001 chr3R_20845001 RAL-853_125b 3393 chr3R 20850046 20850105 chr3R 20850181 20850240 9 135 0.0 4.0 2.0 3.0 194 chr3R 20850046 intergenic RpS30 + chr3R 20850143 intergenic RpS30 + chr3R 20850240 intergenic RpS30 + chr3R_9_20850001 chr3R_20850001 RAL-853_125b 3394 chr3R 20854431 20854437 chr3R 20859276 20859282 Doc 4 4844 18.0 8.5 13.2 0.3 4851 chr3R 20854431 intron Ir93a - chr3R 20856856 intron Ir93a - chr3R 20859282 exon Ir93a - chr3R_4_20855001 chr3R_20855001 RAL-853_125b 3395 chr3R 20854439 20854475 chr3R 20859274 20859320 Doc 15 4841 7.0 7.5 7.2 1.8 4881 chr3R 20854439 intron Ir93a - chr3R 20856880 intron Ir93a - chr3R 20859320 exon Ir93a - chr3R_15_20855001 chr3R_20855001 RAL-853_125b 3396 chr3R 20854476 20854506 chr3R 20859266 20859304 Doc 7 4818 5.0 5.5 5.2 1.1 4828 chr3R 20854476 intron Ir93a - chr3R 20856890 intron Ir93a - chr3R 20859304 exon Ir93a - chr3R_7_20855001 chr3R_20855001 RAL-853_125b 3397 chr3R 20900494 20900566 chr3R 20900625 20900697 21 130 5.5 5.5 5.5 3.2 203 chr3R 20900494 intergenic not near genes chr3R 20900596 intergenic not near genes chr3R 20900697 intergenic not near genes chr3R_21_20900001 chr3R_20900001 RAL-853_125b 3398 chr3R 20916279 20916348 chr3R 20916468 20916537 28 188 6.0 9.0 7.5 3.3 258 chr3R 20916279 intron,intron CG31191 -,hdly + chr3R 20916408 intron,intron CG31191 -,hdly + chr3R 20916537 intron,intron CG31191 -,hdly + chr3R_28_20915001 chr3R_20915001 RAL-853_125b 3399 chr3R 20936038 20936094 chr3R 20936165 20936221 9 127 4.0 3.5 3.8 1.9 183 chr3R 20936038 intron CG31191 - chr3R 20936130 intron CG31191 - chr3R 20936221 intron CG31191 - chr3R_9_20935001 chr3R_20935001 RAL-853_125b 3400 chr3R 20942765 20942842 chr3R 20942891 20942923 11 110 4.0 6.5 5.2 1.8 158 chr3R 20942765 intron CG31191 - chr3R 20942844 intron CG31191 - chr3R 20942923 intron CG31191 - chr3R_11_20940001 chr3R_20940001 RAL-853_125b 3401 chr3R 20966077 20966156 chr3R 20966210 20966289 16 133 4.0 6.5 5.2 2.6 212 chr3R 20966077 intron Atpalpha + chr3R 20966183 intron Atpalpha + chr3R 20966289 intron Atpalpha + chr3R_16_20965001 chr3R_20965001 RAL-853_125b 3402 chr3R 21020356 21020428 chr3R 21020482 21020554 25 126 7.0 6.5 6.8 3.2 198 chr3R 21020356 3` UTR Rlip + chr3R 21020455 3` UTR Rlip + chr3R 21020554 3` UTR Rlip + chr3R_25_21020001 chr3R_21020001 RAL-853_125b 3403 chr3R 21021789 21021860 chr3R 21022160 21022231 22 370 5.5 8.0 6.8 2.8 442 chr3R 21021789 intron CG17278 - chr3R 21022010 intron CG17278 - chr3R 21022231 intron CG17278 - chr3R_22_21020001 chr3R_21020001 RAL-853_125b 3404 chr3R 21041051 21041123 chr3R 21041254 21041326 25 203 10.5 8.0 9.2 2.5 275 chr3R 21041051 exon Dhc93AB - chr3R 21041188 intron Dhc93AB - chr3R 21041326 intron Dhc93AB - chr3R_25_21040001 chr3R_21040001 RAL-853_125b 3405 chr3R 21074806 21074814 chr3R 21075077 21075085 5 271 3.5 12.5 8.0 0.6 279 chr3R 21074806 intron dmrt93B + chr3R 21074946 intron dmrt93B + chr3R 21075085 intron dmrt93B + chr3R_5_21070001 chr3R_21070001 RAL-853_125b 3406 chr3R 21132584 21132631 chr3R 21132717 21132764 13 133 8.5 0.0 4.2 2.5 180 chr3R 21132584 3` UTR Ice2 + chr3R 21132674 3` UTR Ice2 + chr3R 21132764 exon CG7009 - chr3R_13_21130001 chr3R_21130001 RAL-853_125b 3407 chr3R 21141637 21141652 chr3R 21150168 21150183 Tirant 5 8531 19.0 10.0 14.5 0.3 8546 chr3R 21141637 intron SNF4Agamma + chr3R 21145910 intron SNF4Agamma + chr3R 21150183 intron SNF4Agamma + chr3R_5_21145001 chr3R_21145001 RAL-853_125b 3408 chr3R 21150758 21150831 chr3R 21150943 21151016 28 185 7.5 10.5 9.0 2.8 258 chr3R 21150758 intron SNF4Agamma + chr3R 21150887 intron SNF4Agamma + chr3R 21151016 intron SNF4Agamma + chr3R_28_21150001 chr3R_21150001 RAL-853_125b 3409 chr3R 21154525 21154584 chr3R 21154790 21154849 32 265 9.0 7.0 8.0 3.6 324 chr3R 21154525 intron SNF4Agamma + chr3R 21154687 intron SNF4Agamma + chr3R 21154849 intron SNF4Agamma + chr3R_32_21150001 chr3R_21150001 RAL-853_125b 3410 chr3R 21163246 21163279 chr3R 21163368 21163402 5 126 9.5 17.5 13.5 0.3 156 chr3R 21163246 intron SNF4Agamma + chr3R 21163324 intron SNF4Agamma + chr3R 21163402 intron SNF4Agamma + chr3R_5_21160001 chr3R_21160001 RAL-853_125b 3411 chr3R 21176766 21176833 chr3R 21176899 21176966 15 132 5.0 6.5 5.8 2.2 200 chr3R 21176766 intron SNF4Agamma + chr3R 21176866 intron SNF4Agamma + chr3R 21176966 intron SNF4Agamma + chr3R_15_21175001 chr3R_21175001 RAL-853_125b 3412 chr3R 21189647 21189724 chr3R 21189774 21189852 17 127 4.0 3.0 3.5 3.8 205 chr3R 21189647 intron SNF4Agamma + chr3R 21189750 intron SNF4Agamma + chr3R 21189852 intron SNF4Agamma + chr3R_17_21185001 chr3R_21185001 RAL-853_125b 3413 chr3R 21214661 21214684 chr3R 21214792 21214815 11 131 10.0 0.0 5.0 1.8 154 chr3R 21214661 intergenic CG5862 + chr3R 21214738 intergenic CG5862 + chr3R 21214815 intergenic CG5862 + chr3R_11_21210001 chr3R_21210001 RAL-853_125b 3414 chr3R 21245803 21245865 chr3R 21245937 21245999 23 134 8.0 5.0 6.5 3.1 196 chr3R 21245803 intergenic CG5892 + chr3R 21245901 intergenic CG5892 + chr3R 21245999 intergenic not near genes chr3R_23_21245001 chr3R_21245001 RAL-853_125b 3415 chr3R 21248484 21248535 chr3R 21248631 21248677 9 141 8.5 6.5 7.5 1.1 193 chr3R 21248484 intron ETHR + chr3R 21248580 intron ETHR + chr3R 21248677 intron ETHR + chr3R_9_21245001 chr3R_21245001 RAL-853_125b 3416 chr3R 21251302 21251371 chr3R 21251470 21251539 43 168 7.5 9.0 8.2 4.7 237 chr3R 21251302 intron ETHR + chr3R 21251420 intron ETHR + chr3R 21251539 intron ETHR + chr3R_43_21250001 chr3R_21250001 RAL-853_125b 3417 chr3R 21274329 21274620 chr3R 21274473 21274752 33 140 18.0 8.5 13.2 2.3 423 chr3R 21274329 3` UTR CG3301 - chr3R 21274540 3` UTR CG3301 - chr3R 21274752 intron CG3301 - chr3R_33_21270001 chr3R_21270001 RAL-853_125b 3418 chr3R 21322924 21323005 chr3R 21323053 21323119 24 128 4.5 4.0 4.2 4.6 195 chr3R 21322924 exon CG16791 - chr3R 21323022 intron CG16791 - chr3R 21323119 intron CG16791 - chr3R_24_21320001 chr3R_21320001 RAL-853_125b 3419 chr3R 21471975 21471982 chr3R 21472106 21472113 5 131 14.0 11.5 12.8 0.4 138 chr3R 21471975 intergenic not near genes chr3R 21472044 intergenic not near genes chr3R 21472113 intergenic not near genes chr3R_5_21470001 chr3R_21470001 RAL-853_125b 3420 chr3R 21471984 21472023 chr3R 21472103 21472154 9 130 6.0 10.5 8.2 1.0 170 chr3R 21471984 intergenic not near genes chr3R 21472069 intergenic not near genes chr3R 21472154 intergenic not near genes chr3R_9_21470001 chr3R_21470001 RAL-853_125b 3421 chr3R 21475951 21476010 chr3R 21476089 21476148 25 136 11.5 8.0 9.8 2.3 197 chr3R 21475951 intergenic not near genes chr3R 21476050 intergenic not near genes chr3R 21476148 intergenic not near genes chr3R_25_21475001 chr3R_21475001 RAL-853_125b 3422 chr3R 21476013 21476019 chr3R 21476083 21476133 5 115 10.0 7.0 8.5 0.5 120 chr3R 21476013 intergenic not near genes chr3R 21476073 intergenic not near genes chr3R 21476133 intergenic not near genes chr3R_5_21475001 chr3R_21475001 RAL-853_125b 3423 chr3R 21478999 21479046 chr3R 21479350 21479397 13 349 10.5 8.0 9.2 1.3 398 chr3R 21478999 intergenic not near genes chr3R 21479198 intergenic not near genes chr3R 21479397 intergenic not near genes chr3R_13_21475001 chr3R_21475001 RAL-853_125b 3424 chr3R 21491178 21491184 chr3R 21491351 21491357 4 173 20.0 22.0 21.0 0.2 179 chr3R 21491178 intergenic not near genes chr3R 21491268 intergenic not near genes chr3R 21491357 intergenic not near genes chr3R_4_21490001 chr3R_21490001 RAL-853_125b 3425 chr3R 21506827 21506902 chr3R 21506963 21507032 23 136 4.5 6.0 5.2 3.7 205 chr3R 21506827 intron C15 + chr3R 21506930 intron C15 + chr3R 21507032 intron C15 + chr3R_23_21505001 chr3R_21505001 RAL-853_125b 3426 chr3R 21518210 21518269 chr3R 21518340 21518403 10 132 0.0 9.0 4.5 1.8 193 chr3R 21518210 intergenic not near genes chr3R 21518306 intergenic not near genes chr3R 21518403 intergenic not near genes chr3R_10_21515001 chr3R_21515001 RAL-853_125b 3427 chr3R 21519944 21520128 chr3R 21520094 21520272 28 156 0.0 0.0 0.0 28.0 328 chr3R 21519944 intergenic not near genes chr3R 21520108 intergenic not near genes chr3R 21520272 intergenic not near genes chr3R_28_21520001 chr3R_21520001 RAL-853_125b 3428 chr3R 21532731 21532864 chr3R 21532861 21532999 7 141 0.0 0.0 0.0 7.0 268 chr3R 21532731 3` UTR CR43372 - chr3R 21532865 intron CR43372 - chr3R 21532999 intergenic CR43372 - chr3R_7_21530001 chr3R_21530001 RAL-853_125b 3429 chr3R 21569793 21569839 chr3R 21569924 21569970 14 130 10.0 4.0 7.0 1.8 177 chr3R 21569793 intergenic InR - chr3R 21569882 intergenic InR - chr3R 21569970 intergenic InR - chr3R_14_21565001 chr3R_21565001 RAL-853_125b 3430 chr3R 21595643 21595670 chr3R 21595948 21595968 6 303 13.0 15.5 14.2 0.4 325 chr3R 21595643 intron InR - chr3R 21595806 intron InR - chr3R 21595968 intron InR - chr3R_6_21595001 chr3R_21595001 RAL-853_125b 3431 chr3R 21725640 21725680 chr3R 21725826 21725866 4 186 0.0 10.0 5.0 0.7 226 chr3R 21725640 intergenic not near genes chr3R 21725753 intergenic not near genes chr3R 21725866 intergenic not near genes chr3R_4_21725001 chr3R_21725001 RAL-853_125b 3432 chr3R 21751138 21751208 chr3R 21753899 21753954 30 2750 73.5 63.0 68.2 0.4 2816 chr3R 21751138 exon CG31233 + chr3R 21752546 exon CG31233 + chr3R 21753954 intergenic CG31198 + chr3R_30_21750001 chr3R_21750001 RAL-853_125b 3433 chr3R 21761086 21761148 chr3R 21768521 21768590 mdg1 38 7437 6.5 16.5 11.5 3.0 7504 chr3R 21761086 exon CG42335 + chr3R 21764838 intron CG42335 + chr3R 21768590 exon CG42335 + chr3R_38_21760001 chr3R_21760001 RAL-853_125b 3434 chr3R 21845843 21845918 chr3R 21846064 21846139 24 220 5.0 11.5 8.2 2.6 296 chr3R 21845843 5` UTR,exon CR44087 +,Gr93d - chr3R 21845991 intron,exon CR44087 +,Gr93d - chr3R 21846139 5` UTR,exon CR44087 +,Gr93d - chr3R_24_21845001 chr3R_21845001 RAL-853_125b 3435 chr3R 21903616 21903635 chr3R 21903763 21903782 8 147 0.0 16.0 8.0 0.9 166 chr3R 21903616 intron CG6678 + chr3R 21903699 intron CG6678 + chr3R 21903782 intron CG6678 + chr3R_8_21900001 chr3R_21900001 RAL-853_125b 3436 chr3R 8339240 8339247 chr3R 21907534 21907534 12 13568288 41.0 37.5 39.2 0.3 13568294 chr3R 8339240 intergenic not near genes chr3R 15123387 intron CG42788 - chr3R 21907534 intergenic CG6678 + chr3R_12_15120001 chr3R_15120001 RAL-853_125b 3437 chr3R 9620955 9620957 chr3R 21907534 21907534 4 12286578 36.0 37.5 36.8 0.1 12286579 chr3R 9620955 intron CG8312 + chr3R 15764244 intergenic not near genes chr3R 21907534 intergenic CG6678 + chr3R_4_15760001 chr3R_15760001 RAL-853_125b 3438 chr3R 21907534 21907534 chr3R 28831801 28831802 15 6924268 39.0 27.0 33.0 0.4 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_15_25365001 chr3R_25365001 RAL-853_125b 3439 chr3R 8339246 8339247 chr3R 21907535 21907535 9 13568289 41.0 37.5 39.2 0.2 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_9_15120001 chr3R_15120001 RAL-853_125b 3440 chr3R 9620954 9620956 chr3R 21907535 21907535 8 12286579 36.0 37.5 36.8 0.2 12286581 chr3R 9620954 intron CG8312 + chr3R 15764244 intergenic not near genes chr3R 21907535 intergenic CG6678 + chr3R_8_15760001 chr3R_15760001 RAL-853_125b 3441 chr3R 21907535 21907535 chr3R 28831801 28831804 38 6924266 38.5 27.0 32.8 1.1 6924269 chr3R 21907535 intergenic CG6678 + chr3R 25369670 intron Fur1 - chr3R 28831804 intron WASp - chr3R_38_25365001 chr3R_25365001 RAL-853_125b 3442 chr3R 9620956 9620957 chr3R 21907536 21907536 6 12286580 36.0 37.0 36.5 0.2 12286580 chr3R 9620956 intron CG8312 + chr3R 15764246 intergenic not near genes chr3R 21907536 intergenic CG6678 + chr3R_6_15760001 chr3R_15760001 RAL-853_125b 3443 chr3R 21907536 21907536 chr3R 28831801 28831802 43 6924266 38.5 27.0 32.8 1.3 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_43_25365001 chr3R_25365001 RAL-853_125b 3444 chr3R 21923980 21924048 chr3R 21924120 21924168 30 134 11.0 0.0 5.5 4.6 188 chr3R 21923980 intergenic not near genes chr3R 21924074 intergenic not near genes chr3R 21924168 intergenic not near genes chr3R_30_21920001 chr3R_21920001 RAL-853_125b 3445 chr3R 21985195 21985259 chr3R 21985350 21985411 10 153 3.0 2.5 2.8 2.6 216 chr3R 21985195 intron Eip93F + chr3R 21985303 intron Eip93F + chr3R 21985411 intron Eip93F + chr3R_10_21985001 chr3R_21985001 RAL-853_125b 3446 chr3R 22081503 22081559 chr3R 22081630 22081686 16 127 3.0 7.0 5.0 2.7 183 chr3R 22081503 intron CG13408 + chr3R 22081594 intron CG13408 + chr3R 22081686 intron CG13408 + chr3R_16_22080001 chr3R_22080001 RAL-853_125b 3447 chr3R 22084567 22084623 chr3R 22084706 22084762 19 139 0.0 10.5 5.2 3.1 195 chr3R 22084567 intergenic not near genes chr3R 22084664 intergenic not near genes chr3R 22084762 intergenic not near genes chr3R_19_22080001 chr3R_22080001 RAL-853_125b 3448 chr3R 22111097 22111104 chr3R 22111228 22111235 6 131 6.0 15.5 10.8 0.5 138 chr3R 22111097 intergenic not near genes chr3R 22111166 intergenic not near genes chr3R 22111235 intergenic not near genes chr3R_6_22110001 chr3R_22110001 RAL-853_125b 3449 chr3R 22192468 22192528 chr3R 22192737 22192757 14 265 9.5 9.5 9.5 1.3 289 chr3R 22192468 intron SKIP + chr3R 22192612 intron SKIP + chr3R 22192757 intron SKIP + chr3R_14_22190001 chr3R_22190001 RAL-853_125b 3450 chr3R 22234634 22234711 chr3R 22236003 22236080 pogo 33 1368 7.0 4.0 5.5 5.1 1446 chr3R 22234634 intron SKIP + chr3R 22235357 intron SKIP + chr3R 22236080 intron SKIP + chr3R_33_22235001 chr3R_22235001 RAL-853_125b 3451 chr3R 22239456 22239520 chr3R 22248561 22248617 roo 11 9099 7.0 4.0 5.5 1.7 9161 chr3R 22239456 intron SKIP + chr3R 22244036 intron SKIP + chr3R 22248617 intron SKIP + chr3R_11_22240001 chr3R_22240001 RAL-853_125b 3452 chr3R 22428536 22428602 chr3R 22428662 22428728 28 125 9.5 8.0 8.8 2.9 192 chr3R 22428536 intron CG13847 - chr3R 22428632 intron CG13847 - chr3R 22428728 intron CG13847 - chr3R_28_22425001 chr3R_22425001 RAL-853_125b 3453 chr3R 22433053 22433065 chr3R 22433203 22433215 5 150 17.0 14.5 15.8 0.3 162 chr3R 22433053 intron CG13847 - chr3R 22433134 intron CG13847 - chr3R 22433215 intron CG13847 - chr3R_5_22430001 chr3R_22430001 RAL-853_125b 3454 chr3R 22433066 22433096 chr3R 22433201 22433206 11 144 12.5 14.0 13.2 0.8 140 chr3R 22433066 intron CG13847 - chr3R 22433136 intron CG13847 - chr3R 22433206 intron CG13847 - chr3R_11_22430001 chr3R_22430001 RAL-853_125b 3455 chr3R 22450503 22450569 chr3R 22453193 22453259 NOF 18 2689 7.0 11.5 9.2 1.8 2756 chr3R 22450503 intron CG34376 + chr3R 22451881 intron CG34376 + chr3R 22453259 intron CG34376 + chr3R_18_22450001 chr3R_22450001 RAL-853_125b 3456 chr3R 22520719 22520789 chr3R 22520856 22520926 26 137 11.5 12.0 11.8 2.0 207 chr3R 22520719 intron CG5346 - chr3R 22520822 intron CG5346 - chr3R 22520926 intron CG5346 - chr3R_26_22520001 chr3R_22520001 RAL-853_125b 3457 chr3R 22526259 22526328 chr3R 22526390 22526459 28 130 17.5 17.5 17.5 1.5 200 chr3R 22526259 intron CG5346 - chr3R 22526359 intron CG5346 - chr3R 22526459 intron CG5346 - chr3R_28_22525001 chr3R_22525001 RAL-853_125b 3458 chr3R 22538397 22538471 chr3R 22538532 22538606 29 135 8.0 9.5 8.8 3.0 209 chr3R 22538397 intron CG5326 - chr3R 22538502 intron CG5326 - chr3R 22538606 intron CG5326 - chr3R_29_22535001 chr3R_22535001 RAL-853_125b 3459 chr3R 22550556 22550602 chr3R 22550652 22550683 6 97 6.5 10.0 8.2 0.7 127 chr3R 22550556 3` UTR CR44062 - chr3R 22550620 3` UTR CR44062 - chr3R 22550683 3` UTR,5` UTR CR44062 -,bond + chr3R_6_22550001 chr3R_22550001 RAL-853_125b 3460 chr3R 22572205 22572226 chr3R 22572343 22572364 10 138 29.5 21.5 25.5 0.4 159 chr3R 22572205 intron CG33110 + chr3R 22572284 intron CG33110 + chr3R 22572364 intron CG33110 + chr3R_10_22570001 chr3R_22570001 RAL-853_125b 3461 chr3R 22572227 22572263 chr3R 22572335 22572401 7 134 21.0 20.0 20.5 0.3 174 chr3R 22572227 intron CG33110 + chr3R 22572314 intron CG33110 + chr3R 22572401 exon CG33110 + chr3R_7_22570001 chr3R_22570001 RAL-853_125b 3462 chr3R 22590732 22590798 chr3R 22590860 22590926 17 128 15.0 18.0 16.5 1.0 194 chr3R 22590732 intron Efa6 + chr3R 22590829 intron Efa6 + chr3R 22590926 intron Efa6 + chr3R_17_22590001 chr3R_22590001 RAL-853_125b 3463 chr3R 22597331 22597355 chr3R 22597458 22597465 4 123 25.5 19.5 22.5 0.2 134 chr3R 22597331 intron Efa6 + chr3R 22597398 intron Efa6 + chr3R 22597465 intron Efa6 + chr3R_4_22595001 chr3R_22595001 RAL-853_125b 3464 chr3R 22597360 22597404 chr3R 22597455 22597530 4 98 15.0 20.0 17.5 0.2 170 chr3R 22597360 intron Efa6 + chr3R 22597445 intron Efa6 + chr3R 22597530 intron Efa6 + chr3R_4_22595001 chr3R_22595001 RAL-853_125b 3465 chr3R 22661255 22661305 chr3R 22661379 22661439 6 123 37.0 29.5 33.2 0.2 184 chr3R 22661255 intron wake + chr3R 22661347 intron wake + chr3R 22661439 intron wake + chr3R_6_22660001 chr3R_22660001 RAL-853_125b 3466 chr3R 22662147 22662201 chr3R 22662266 22662336 23 134 17.5 16.0 16.8 1.3 189 chr3R 22662147 intron wake + chr3R 22662242 intron wake + chr3R 22662336 intron wake + chr3R_23_22660001 chr3R_22660001 RAL-853_125b 3467 chr3R 22672267 22672292 chr3R 22672410 22672435 4 143 34.5 32.0 33.2 0.1 168 chr3R 22672267 intron wake + chr3R 22672351 intron wake + chr3R 22672435 intron wake + chr3R_4_22670001 chr3R_22670001 RAL-853_125b 3468 chr3R 22769065 22769121 chr3R 22769172 22769244 24 124 8.5 14.0 11.2 2.0 179 chr3R 22769065 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769154 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769244 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_24_22765001 chr3R_22765001 RAL-853_125b 3469 chr3R 22794465 22794532 chr3R 22794592 22794655 28 125 6.5 5.5 6.0 4.0 190 chr3R 22794465 intergenic CG7029 + chr3R 22794560 intergenic not near genes chr3R 22794655 intergenic not near genes chr3R_28_22790001 chr3R_22790001 RAL-853_125b 3470 chr3R 22796078 22796130 chr3R 22796220 22796232 7 131 12.5 15.0 13.8 0.5 154 chr3R 22796078 intergenic not near genes chr3R 22796155 intergenic not near genes chr3R 22796232 intergenic not near genes chr3R_7_22795001 chr3R_22795001 RAL-853_125b 3471 chr3R 22797716 22797730 chr3R 22797852 22797866 6 136 15.0 0.0 7.5 0.7 150 chr3R 22797716 intergenic not near genes chr3R 22797791 intergenic not near genes chr3R 22797866 intergenic not near genes chr3R_6_22795001 chr3R_22795001 RAL-853_125b 3472 chr3R 22797732 22797933 chr3R 22797846 22798078 35 139 0.0 0.0 0.0 35.0 346 chr3R 22797732 intergenic not near genes chr3R 22797905 intergenic not near genes chr3R 22798078 intergenic not near genes chr3R_35_22795001 chr3R_22795001 RAL-853_125b 3473 chr3R 22835774 22835840 chr3R 22835906 22835972 32 131 16.5 19.0 17.8 1.7 198 chr3R 22835774 intergenic not near genes chr3R 22835873 intergenic not near genes chr3R 22835972 intergenic not near genes chr3R_32_22835001 chr3R_22835001 RAL-853_125b 3474 chr3R 22840444 22840454 chr3R 22840537 22840577 4 118 31.5 34.0 32.8 0.1 133 chr3R 22840444 intergenic not near genes chr3R 22840510 intergenic not near genes chr3R 22840577 intergenic not near genes chr3R_4_22840001 chr3R_22840001 RAL-853_125b 3475 chr3R 22842374 22842388 chr3R 22842517 22842537 5 148 17.0 18.0 17.5 0.3 163 chr3R 22842374 intergenic not near genes chr3R 22842456 intergenic not near genes chr3R 22842537 intergenic not near genes chr3R_5_22840001 chr3R_22840001 RAL-853_125b 3476 chr3R 22842389 22842407 chr3R 22842500 22842556 7 144 17.0 15.5 16.2 0.4 167 chr3R 22842389 intergenic not near genes chr3R 22842472 intergenic not near genes chr3R 22842556 intergenic not near genes chr3R_7_22840001 chr3R_22840001 RAL-853_125b 3477 chr3R 22856797 22856879 chr3R 22856987 22857044 10 184 13.0 11.5 12.2 0.8 247 chr3R 22856797 intergenic not near genes chr3R 22856920 intergenic not near genes chr3R 22857044 intergenic not near genes chr3R_10_22855001 chr3R_22855001 RAL-853_125b 3478 chr3R 22867397 22867465 chr3R 22867578 22867646 18 180 12.0 13.5 12.8 1.3 249 chr3R 22867397 intergenic not near genes chr3R 22867522 intergenic not near genes chr3R 22867646 intergenic not near genes chr3R_18_22865001 chr3R_22865001 RAL-853_125b 3479 chr3R 22880554 22880614 chr3R 22880681 22880741 6 127 19.5 17.0 18.2 0.3 187 chr3R 22880554 intergenic not near genes chr3R 22880648 intergenic not near genes chr3R 22880741 intergenic not near genes chr3R_6_22880001 chr3R_22880001 RAL-853_125b 3480 chr3R 22880883 22880947 chr3R 22881071 22881135 9 188 30.0 28.0 29.0 0.3 252 chr3R 22880883 intergenic not near genes chr3R 22881009 intergenic not near genes chr3R 22881135 intergenic not near genes chr3R_9_22880001 chr3R_22880001 RAL-853_125b 3481 chr3R 22881191 22881216 chr3R 22884946 22884966 Doc 12 3754 6.0 10.5 8.2 1.3 3775 chr3R 22881191 intergenic not near genes chr3R 22883078 intergenic not near genes chr3R 22884966 intergenic not near genes chr3R_12_22880001 chr3R_22880001 RAL-853_125b 3482 chr3R 22913191 22913239 chr3R 22913317 22913358 19 126 14.0 18.5 16.2 1.1 167 chr3R 22913191 intron klg + chr3R 22913274 intron klg + chr3R 22913358 intron klg + chr3R_19_22910001 chr3R_22910001 RAL-853_125b 3483 chr3R 22944626 22944650 chr3R 22944753 22944776 10 125 25.0 18.0 21.5 0.4 150 chr3R 22944626 intron klg + chr3R 22944701 intron klg + chr3R 22944776 intron klg + chr3R_10_22940001 chr3R_22940001 RAL-853_125b 3484 chr3R 22945916 22945951 chr3R 22946045 22946081 10 130 3.5 7.5 5.5 1.5 165 chr3R 22945916 intron klg + chr3R 22945998 intron klg + chr3R 22946081 intron klg + chr3R_10_22945001 chr3R_22945001 RAL-853_125b 3485 chr3R 22974270 22974308 chr3R 22974404 22974442 14 133 8.0 16.5 12.2 1.1 172 chr3R 22974270 intergenic not near genes chr3R 22974356 intergenic not near genes chr3R 22974442 intergenic not near genes chr3R_14_22970001 chr3R_22970001 RAL-853_125b 3486 chr3R 23002928 23002978 chr3R 23003052 23003106 11 127 10.0 8.5 9.2 1.1 178 chr3R 23002928 exon CG34375 - chr3R 23003017 intron CG34375 - chr3R 23003106 intron CG34375 - chr3R_11_23000001 chr3R_23000001 RAL-853_125b 3487 chr3R 23070608 23070698 chr3R 23070738 23070826 23 135 5.5 7.0 6.2 3.2 218 chr3R 23070608 3` UTR CG13830 - chr3R 23070717 3` UTR CG13830 - chr3R 23070826 3` UTR CG13830 - chr3R_23_23070001 chr3R_23070001 RAL-853_125b 3488 chr3R 23073623 23073636 chr3R 23073762 23073775 5 139 18.0 15.0 16.5 0.3 152 chr3R 23073623 intron CG13830 - chr3R 23073699 intron CG13830 - chr3R 23073775 intron CG13830 - chr3R_5_23070001 chr3R_23070001 RAL-853_125b 3489 chr3R 23073638 23073674 chr3R 23073760 23073813 15 135 14.0 14.5 14.2 1.0 175 chr3R 23073638 intron CG13830 - chr3R 23073726 intron CG13830 - chr3R 23073813 intron CG13830 - chr3R_15_23070001 chr3R_23070001 RAL-853_125b 3490 chr3R 23082910 23082974 chr3R 23083158 23083223 10 247 23.0 29.0 26.0 0.4 313 chr3R 23082910 intron CG13830 - chr3R 23083066 intron CG13830 - chr3R 23083223 intron CG13830 - chr3R_10_23080001 chr3R_23080001 RAL-853_125b 3491 chr3R 23101331 23101408 chr3R 23101473 23101550 26 138 6.5 8.5 7.5 3.1 219 chr3R 23101331 intron CG13830 - chr3R 23101440 intron CG13830 - chr3R 23101550 intron CG13830 - chr3R_26_23100001 chr3R_23100001 RAL-853_125b 3492 chr3R 23110829 23110910 chr3R 23111046 23111127 42 217 17.5 17.0 17.2 2.3 298 chr3R 23110829 intron CG13830 - chr3R 23110978 intron CG13830 - chr3R 23111127 intron CG13830 - chr3R_42_23110001 chr3R_23110001 RAL-853_125b 3493 chr3R 23114141 23114189 chr3R 23114269 23114317 12 128 60.5 59.5 60.0 0.2 176 chr3R 23114141 3` UTR Rassf - chr3R 23114229 3` UTR Rassf - chr3R 23114317 3` UTR Rassf - chr3R_12_23110001 chr3R_23110001 RAL-853_125b 3494 chr3R 23110807 23110830 chr3R 23117036 23117093 14 6232 32.5 68.0 50.2 0.3 6286 chr3R 23110807 intron CG13830 - chr3R 23113950 intergenic Rassf - chr3R 23117093 exon Rassf - chr3R_14_23110001 chr3R_23110001 RAL-853_125b 3495 chr3R 23182637 23182678 chr3R 23182770 23182811 9 133 14.0 6.0 10.0 0.8 174 chr3R 23182637 intron Irk1 + chr3R 23182724 intron Irk1 + chr3R 23182811 intron Irk1 + chr3R_9_23180001 chr3R_23180001 RAL-853_125b 3496 chr3R 23217458 23217522 chr3R 23217765 23217834 10 314 40.0 60.0 50.0 0.2 376 chr3R 23217458 intron cnc - chr3R 23217646 intron cnc - chr3R 23217834 intron cnc - chr3R_10_23215001 chr3R_23215001 RAL-853_125b 3497 chr3R 23245942 23246000 chr3R 23246072 23246139 23 132 7.5 8.5 8.0 2.6 197 chr3R 23245942 intron CG4467 - chr3R 23246040 intron CG4467 - chr3R 23246139 intron CG4467 - chr3R_23_23245001 chr3R_23245001 RAL-853_125b 3498 chr3R 23260909 23260941 chr3R 23261041 23261064 15 130 14.5 6.0 10.2 1.3 155 chr3R 23260909 3` UTR orb - chr3R 23260986 3` UTR orb - chr3R 23261064 3` UTR orb - chr3R_15_23260001 chr3R_23260001 RAL-853_125b 3499 chr3R 23260949 23260989 chr3R 23261035 23261122 10 128 7.5 6.5 7.0 1.2 173 chr3R 23260949 3` UTR orb - chr3R 23261036 3` UTR orb - chr3R 23261122 3` UTR orb - chr3R_10_23260001 chr3R_23260001 RAL-853_125b 3500 chr3R 23317390 23317452 chr3R 23317524 23317586 29 134 8.5 6.0 7.2 3.5 196 chr3R 23317390 intron pnt - chr3R 23317488 intron pnt - chr3R 23317586 intron pnt - chr3R_29_23315001 chr3R_23315001 RAL-853_125b 3501 chr3R 23319656 23319676 chr3R 23319784 23319804 12 128 0.0 11.0 5.5 1.8 148 chr3R 23319656 intron pnt - chr3R 23319730 intron pnt - chr3R 23319804 intron pnt - chr3R_12_23315001 chr3R_23315001 RAL-853_125b 3502 chr3R 23356974 23357019 chr3R 23357110 23357155 8 136 10.0 0.5 5.2 1.3 181 chr3R 23356974 intron Sec13 + chr3R 23357064 intron Sec13 + chr3R 23357155 intron Sec13 + chr3R_8_23355001 chr3R_23355001 RAL-853_125b 3503 chr3R 23385559 23385615 chr3R 23385721 23385788 6 171 12.0 9.0 10.5 0.5 229 chr3R 23385559 intergenic not near genes chr3R 23385674 intergenic not near genes chr3R 23385788 intergenic not near genes chr3R_6_23385001 chr3R_23385001 RAL-853_125b 3504 chr3R 23390915 23390952 chr3R 23391047 23391081 7 132 6.5 5.0 5.8 1.0 166 chr3R 23390915 intergenic CR43387 + chr3R 23390998 intergenic CR43387 + chr3R 23391081 intergenic not near genes chr3R_7_23390001 chr3R_23390001 RAL-853_125b 3505 chr3R 23421952 23421960 chr3R 23422081 23422095 5 134 15.5 14.0 14.8 0.3 143 chr3R 23421952 intron CG4374 - chr3R 23422024 intron CG4374 - chr3R 23422095 intron CG4374 - chr3R_5_23420001 chr3R_23420001 RAL-853_125b 3506 chr3R 23421961 23422008 chr3R 23422068 23422143 16 129 5.5 12.0 8.8 1.6 182 chr3R 23421961 intron CG4374 - chr3R 23422052 intron CG4374 - chr3R 23422143 intron CG4374 - chr3R_16_23420001 chr3R_23420001 RAL-853_125b 3507 chr3R 23449112 23449169 chr3R 23449226 23449299 5 127 25.0 24.5 24.8 0.2 187 chr3R 23449112 intron CG4374 - chr3R 23449206 intron CG4374 - chr3R 23449299 intron CG4374 - chr3R_5_23445001 chr3R_23445001 RAL-853_125b 3508 chr3R 23497909 23497968 chr3R 23498031 23498102 5 131 30.5 31.5 31.0 0.2 193 chr3R 23497909 intergenic not near genes chr3R 23498006 intergenic not near genes chr3R 23498102 intergenic not near genes chr3R_5_23495001 chr3R_23495001 RAL-853_125b 3509 chr3R 23529695 23529768 chr3R 23529844 23529917 7 149 33.5 33.0 33.2 0.2 222 chr3R 23529695 intron CG10175 - chr3R 23529806 intron CG10175 - chr3R 23529917 intron CG10175 - chr3R_7_23525001 chr3R_23525001 RAL-853_125b 3510 chr3R 23540371 23540435 chr3R 23540502 23540566 5 124 38.0 36.5 37.2 0.1 195 chr3R 23540371 intergenic not near genes chr3R 23540468 intergenic not near genes chr3R 23540566 intergenic not near genes chr3R_5_23540001 chr3R_23540001 RAL-853_125b 3511 chr3R 23540736 23540773 chr3R 23540877 23540914 6 140 29.5 24.5 27.0 0.2 178 chr3R 23540736 intergenic not near genes chr3R 23540825 intergenic not near genes chr3R 23540914 intergenic not near genes chr3R_6_23540001 chr3R_23540001 RAL-853_125b 3512 chr3R 23558353 23558429 chr3R 23560184 23560261 Bari1 15 1830 5.0 7.5 6.2 2.1 1908 chr3R 23558353 intron beat-IV + chr3R 23559307 intron beat-IV + chr3R 23560261 intron beat-IV + chr3R_15_23555001 chr3R_23555001 RAL-853_125b 3513 chr3R 23562114 23562187 chr3R 23562245 23562295 21 126 16.0 14.0 15.0 1.3 181 chr3R 23562114 intron beat-IV + chr3R 23562204 intron beat-IV + chr3R 23562295 intron beat-IV + chr3R_21_23560001 chr3R_23560001 RAL-853_125b 3514 chr3R 23564397 23564459 chr3R 23564591 23564653 8 193 29.5 27.0 28.2 0.3 256 chr3R 23564397 intron beat-IV + chr3R 23564525 intron beat-IV + chr3R 23564653 intron beat-IV + chr3R_8_23560001 chr3R_23560001 RAL-853_125b 3515 chr3R 23627502 23627639 chr3R 23627629 23627762 18 133 6.5 9.5 8.0 2.0 260 chr3R 23627502 intron CG31145 - chr3R 23627632 intron CG31145 - chr3R 23627762 intron CG31145 - chr3R_18_23625001 chr3R_23625001 RAL-853_125b 3516 chr3R 23629780 23629846 chr3R 23629908 23629975 17 125 14.0 13.0 13.5 1.2 195 chr3R 23629780 intron CG31145 - chr3R 23629878 intron CG31145 - chr3R 23629975 intron CG31145 - chr3R_17_23625001 chr3R_23625001 RAL-853_125b 3517 chr3R 23652916 23652977 chr3R 23653071 23653132 16 152 9.0 6.0 7.5 1.9 216 chr3R 23652916 intron CG31145 - chr3R 23653024 intron CG31145 - chr3R 23653132 intron CG31145 - chr3R_16_23650001 chr3R_23650001 RAL-853_125b 3518 chr3R 23670522 23670561 chr3R 23670785 23670825 4 264 21.5 23.0 22.2 0.2 303 chr3R 23670522 intergenic not near genes chr3R 23670674 intergenic not near genes chr3R 23670825 intergenic not near genes chr3R_4_23670001 chr3R_23670001 RAL-853_125b 3519 chr3R 23684653 23684666 chr3R 23685188 23685202 roo 10 535 23.5 9.0 16.2 0.6 549 chr3R 23684653 exon CG18754 + chr3R 23684928 intron CG18754 + chr3R 23685202 exon CG18754 + chr3R_10_23680001 chr3R_23680001 RAL-853_125b 3520 chr3R 23684668 23684723 chr3R 23685182 23685223 roo 30 524 9.5 8.5 9.0 3.0 555 chr3R 23684668 exon CG18754 + chr3R 23684946 intron CG18754 + chr3R 23685223 exon CG18754 + chr3R_30_23680001 chr3R_23680001 RAL-853_125b 3521 chr3R 23725428 23725477 chr3R 23725554 23725608 18 131 5.5 14.0 9.8 1.7 180 chr3R 23725428 intron CG10365 + chr3R 23725518 intron CG10365 + chr3R 23725608 intron CG10365 + chr3R_18_23725001 chr3R_23725001 RAL-853_125b 3522 chr3R 23801529 23801556 chr3R 23801667 23801692 7 138 14.5 2.0 8.2 0.8 163 chr3R 23801529 3` UTR mbc + chr3R 23801610 3` UTR mbc + chr3R 23801692 intergenic CG33111 -,mbc + chr3R_7_23800001 chr3R_23800001 RAL-853_125b 3523 chr3R 23809781 23809864 chr3R 23809920 23809991 4 130 13.5 19.0 16.2 0.2 210 chr3R 23809781 intron,intron,3` UTR CG33111 -,CG34355 +,eIF4G2 - chr3R 23809886 intron,intron,3` UTR CG33111 -,CG34355 +,eIF4G2 - chr3R 23809991 intron,intron,3` UTR CG33111 -,CG34355 +,eIF4G2 - chr3R_4_23805001 chr3R_23805001 RAL-853_125b 3524 chr3R 23835364 23835428 chr3R 23844564 23844626 roo 11 9199 8.5 1.0 4.8 1.9 9262 chr3R 23835364 intron CG34355 + chr3R 23839995 intron CG34355 + chr3R 23844626 intron CG34355 + chr3R_11_23835001 chr3R_23835001 RAL-853_125b 3525 chr3R 23851038 23851083 chr3R 23858755 23858800 opus 20 7717 7.5 14.0 10.8 1.7 7762 chr3R 23851038 3` UTR CG34355 + chr3R 23854919 intergenic not near genes chr3R 23858800 intergenic not near genes chr3R_20_23850001 chr3R_23850001 RAL-853_125b 3526 chr3R 23873952 23873967 chr3R 23874067 23874084 8 121 15.5 25.0 20.2 0.4 132 chr3R 23873952 intron Pli - chr3R 23874018 intron Pli - chr3R 23874084 intron Pli - chr3R_8_23870001 chr3R_23870001 RAL-853_125b 3527 chr3R 23888048 23888097 chr3R 23888184 23888233 5 136 25.5 26.0 25.8 0.2 185 chr3R 23888048 intron Pli - chr3R 23888140 intron Pli - chr3R 23888233 intron Pli - chr3R_5_23885001 chr3R_23885001 RAL-853_125b 3528 chr3R 23893742 23893814 chr3R 23893893 23893932 5 139 33.5 31.0 32.2 0.2 190 chr3R 23893742 intergenic tbrd-1 -,sba - chr3R 23893837 intergenic sba -,tbrd-1 - chr3R 23893932 intergenic sba - chr3R_5_23890001 chr3R_23890001 RAL-853_125b 3529 chr3R 23944865 23944931 chr3R 23945000 23945066 35 133 7.5 11.0 9.2 3.4 201 chr3R 23944865 intron CG12268 - chr3R 23944966 intron CG12268 - chr3R 23945066 exon CG12268 - chr3R_35_23940001 chr3R_23940001 RAL-853_125b 3530 chr3R 24011621 24011680 chr3R 24011754 24011813 23 130 6.0 9.0 7.5 2.7 192 chr3R 24011621 intron KrT95D - chr3R 24011717 intron KrT95D - chr3R 24011813 intron KrT95D - chr3R_23_24010001 chr3R_24010001 RAL-853_125b 3531 chr3R 24024975 24024998 chr3R 24025102 24025140 4 133 37.5 40.0 38.8 0.1 165 chr3R 24024975 intron KrT95D - chr3R 24025058 intron KrT95D - chr3R 24025140 intron KrT95D - chr3R_4_24025001 chr3R_24025001 RAL-853_125b 3532 chr3R 24072052 24072123 chr3R 24072530 24072609 jockey 31 483 6.0 3.0 4.5 5.6 557 chr3R 24072052 intron 4EHP - chr3R 24072330 intron 4EHP - chr3R 24072609 intron 4EHP - chr3R_31_24070001 chr3R_24070001 RAL-853_125b 3533 chr3R 24076882 24076895 chr3R 24078399 24078412 hobo 5 1517 6.0 9.5 7.8 0.6 1530 chr3R 24076882 intron 4EHP - chr3R 24077647 intron 4EHP - chr3R 24078412 intron 4EHP - chr3R_5_24075001 chr3R_24075001 RAL-853_125b 3534 chr3R 24076899 24076943 chr3R 24078391 24078460 hobo 12 1515 4.5 9.0 6.8 1.5 1561 chr3R 24076899 intron 4EHP - chr3R 24077680 intron 4EHP - chr3R 24078460 intron 4EHP - chr3R_12_24075001 chr3R_24075001 RAL-853_125b 3535 chr3R 24173508 24173578 chr3R 24173640 24173710 12 132 10.5 10.5 10.5 1.0 202 chr3R 24173508 intron CG13606 + chr3R 24173609 intron CG13606 + chr3R 24173710 intron CG13606 + chr3R_12_24170001 chr3R_24170001 RAL-853_125b 3536 chr3R 24199692 24199765 chr3R 24199822 24199881 22 125 13.5 13.5 13.5 1.5 189 chr3R 24199692 intron twin - chr3R 24199786 intron twin - chr3R 24199881 intron twin - chr3R_22_24195001 chr3R_24195001 RAL-853_125b 3537 chr3R 24207175 24207238 chr3R 24212301 24212365 flea 15 5126 9.5 11.5 10.5 1.3 5190 chr3R 24207175 intron twin - chr3R 24209770 intron twin - chr3R 24212365 intron twin - chr3R_15_24205001 chr3R_24205001 RAL-853_125b 3538 chr3R 21907534 21907535 chr3R 24389465 24389465 15 2481930 38.5 29.5 34.0 0.4 2481931 chr3R 21907534 intergenic CG6678 + chr3R 23148500 intergenic not near genes chr3R 24389465 intron CG5768 - chr3R_15_23145001 chr3R_23145001 RAL-853_125b 3539 chr3R 24431549 24431612 chr3R 24431678 24431741 30 128 10.0 0.0 5.0 5.0 192 chr3R 24431549 intron nAChRalpha1 - chr3R 24431645 intron nAChRalpha1 - chr3R 24431741 intron nAChRalpha1 - chr3R_30_24430001 chr3R_24430001 RAL-853_125b 3540 chr3R 24441580 24441589 chr3R 24441912 24441921 6 331 17.5 8.5 13.0 0.4 341 chr3R 24441580 intron nAChRalpha1 - chr3R 24441750 intron nAChRalpha1 - chr3R 24441921 intron nAChRalpha1 - chr3R_6_24440001 chr3R_24440001 RAL-853_125b 3541 chr3R 24441592 24441650 chr3R 24441902 24441982 18 330 6.5 7.5 7.0 2.2 390 chr3R 24441592 intron nAChRalpha1 - chr3R 24441787 intron nAChRalpha1 - chr3R 24441982 intron nAChRalpha1 - chr3R_18_24440001 chr3R_24440001 RAL-853_125b 3542 chr3R 24466418 24466496 chr3R 24466546 24466592 31 126 5.0 4.5 4.8 5.3 174 chr3R 24466418 intergenic not near genes chr3R 24466505 intergenic not near genes chr3R 24466592 intergenic not near genes chr3R_31_24465001 chr3R_24465001 RAL-853_125b 3543 chr3R 24482894 24482929 chr3R 24483012 24483052 9 128 12.0 10.0 11.0 0.8 158 chr3R 24482894 intergenic not near genes chr3R 24482973 intergenic not near genes chr3R 24483052 intergenic not near genes chr3R_9_24480001 chr3R_24480001 RAL-853_125b 3544 chr3R 24493036 24493089 chr3R 24493183 24493236 18 147 5.0 7.5 6.2 2.5 200 chr3R 24493036 intergenic not near genes chr3R 24493136 intergenic not near genes chr3R 24493236 intergenic not near genes chr3R_18_24490001 chr3R_24490001 RAL-853_125b 3545 chr3R 24493234 24493299 chr3R 24493513 24493578 BS 29 279 9.0 8.0 8.5 3.1 344 chr3R 24493234 intergenic not near genes chr3R 24493406 intergenic not near genes chr3R 24493578 intergenic not near genes chr3R_29_24490001 chr3R_24490001 RAL-853_125b 3546 chr3R 24527765 24527823 chr3R 24527906 24527964 18 141 8.0 2.5 5.2 2.9 199 chr3R 24527765 intergenic CG13618 +,CG6607 + chr3R 24527864 intergenic CG6607 +,CG13618 + chr3R 24527964 intergenic CG6607 +,CG13618 + chr3R_18_24525001 chr3R_24525001 RAL-853_125b 3547 chr3R 24594628 24594665 chr3R 24594918 24594955 pogo 17 289 12.5 16.5 14.5 1.1 327 chr3R 24594628 intron mld + chr3R 24594792 intron mld + chr3R 24594955 intron mld + chr3R_17_24590001 chr3R_24590001 RAL-853_125b 3548 chr3R 24605531 24605555 chr3R 24605660 24605691 9 132 17.0 23.5 20.2 0.4 160 chr3R 24605531 intron mld + chr3R 24605611 intron mld + chr3R 24605691 intron mld + chr3R_9_24605001 chr3R_24605001 RAL-853_125b 3549 chr3R 24635600 24635677 chr3R 24635736 24635813 33 135 6.0 8.0 7.0 4.1 213 chr3R 24635600 3` UTR puf - chr3R 24635706 3` UTR puf - chr3R 24635813 3` UTR puf - chr3R_33_24635001 chr3R_24635001 RAL-853_125b 3550 chr3R 24670004 24670192 chr3R 24670164 24670327 24 147 0.0 0.0 0.0 24.0 323 chr3R 24670004 intron slo + chr3R 24670166 intron slo + chr3R 24670327 intron slo + chr3R_24_24670001 chr3R_24670001 RAL-853_125b 3551 chr3R 24730050 24730087 chr3R 24732478 24732499 Doc 11 2425 12.5 0.0 6.2 1.5 2449 chr3R 24730050 intron tok + chr3R 24731274 intron tok + chr3R 24732499 intron tok + chr3R_11_24730001 chr3R_24730001 RAL-853_125b 3552 chr3R 24742990 24743057 chr3R 24743125 24743192 18 134 6.5 11.5 9.0 1.8 202 chr3R 24742990 intron tok + chr3R 24743091 intron tok + chr3R 24743192 exon tok + chr3R_18_24740001 chr3R_24740001 RAL-853_125b 3553 chr3R 24787508 24787544 chr3R 24787634 24787670 5 126 13.5 2.5 8.0 0.6 162 chr3R 24787508 intergenic CG5805 - chr3R 24787589 intergenic CG5805 -,Ets96B + chr3R 24787670 intergenic CG5805 -,Ets96B + chr3R_5_24785001 chr3R_24785001 RAL-853_125b 3554 chr3R 24789937 24790010 chr3R 24790132 24790190 24 192 9.0 12.5 10.8 2.0 253 chr3R 24789937 intron,5` UTR Ets96B +,CG13634 - chr3R 24790064 intron,5` UTR Ets96B +,CG13634 - chr3R 24790190 intron Ets96B + chr3R_24_24790001 chr3R_24790001 RAL-853_125b 3555 chr3R 24854841 24854908 chr3R 24854973 24855040 13 132 11.5 11.0 11.2 1.1 199 chr3R 24854841 3` UTR,3` UTR nct +,HdacX - chr3R 24854940 3` UTR HdacX - chr3R 24855040 3` UTR HdacX - chr3R_13_24850001 chr3R_24850001 RAL-853_125b 3556 chr3R 24912441 24912499 chr3R 24912573 24912631 4 132 9.5 2.0 5.8 0.6 190 chr3R 24912441 intergenic not near genes chr3R 24912536 intergenic CR44267 + chr3R 24912631 intergenic CR44267 + chr3R_4_24910001 chr3R_24910001 RAL-853_125b 3557 chr3R 24927088 24927147 chr3R 24931929 24931971 Doc 31 4839 9.5 8.5 9.0 3.1 4883 chr3R 24927088 intergenic Trf4-2 + chr3R 24929530 intergenic not near genes chr3R 24931971 intergenic CG11771 + chr3R_31_24925001 chr3R_24925001 RAL-853_125b 3558 chr3R 24974862 24974933 chr3R 24974991 24975051 34 129 12.0 9.0 10.5 3.0 189 chr3R 24974862 intergenic not near genes chr3R 24974956 intergenic not near genes chr3R 24975051 intergenic not near genes chr3R_34_24970001 chr3R_24970001 RAL-853_125b 3559 chr3R 25004851 25004921 chr3R 25004984 25005054 23 133 6.0 10.0 8.0 2.6 203 chr3R 25004851 intron tnc + chr3R 25004952 intron tnc + chr3R 25005054 intron tnc + chr3R_23_25000001 chr3R_25000001 RAL-853_125b 3560 chr3R 25027495 25027570 chr3R 25027758 25027804 24 261 8.5 10.5 9.5 2.3 309 chr3R 25027495 intron Hr96 + chr3R 25027650 intron Hr96 + chr3R 25027804 intron Hr96 + chr3R_24_25025001 chr3R_25025001 RAL-853_125b 3561 chr3R 25136354 25136420 chr3R 25136484 25136550 12 130 11.0 7.0 9.0 1.2 196 chr3R 25136354 3` UTR Bili + chr3R 25136452 3` UTR Bili + chr3R 25136550 3` UTR Bili + chr3R_12_25135001 chr3R_25135001 RAL-853_125b 3562 chr3R 25166156 25166357 chr3R 25166283 25166483 21 128 0.0 0.5 0.2 17.5 327 chr3R 25166156 intergenic not near genes chr3R 25166320 intergenic not near genes chr3R 25166483 intergenic not near genes chr3R_21_25165001 chr3R_25165001 RAL-853_125b 3563 chr3R 25196832 25196861 chr3R 25197056 25197085 5 224 28.5 29.0 28.8 0.2 253 chr3R 25196832 intergenic CG13653 + chr3R 25196958 intergenic CG13653 + chr3R 25197085 intergenic Cad96Ca - chr3R_5_25195001 chr3R_25195001 RAL-853_125b 3564 chr3R 25209532 25209619 chr3R 25209677 25209751 14 135 17.5 23.5 20.5 0.7 219 chr3R 25209532 intron CG13654 + chr3R 25209642 intron CG13654 + chr3R 25209751 intron CG13654 + chr3R_14_25205001 chr3R_25205001 RAL-853_125b 3565 chr3R 25235669 25235722 chr3R 25235809 25235862 7 140 8.5 9.5 9.0 0.7 193 chr3R 25235669 intergenic CG10420 - chr3R 25235766 intergenic CG10420 - chr3R 25235862 intergenic CG10420 - chr3R_7_25235001 chr3R_25235001 RAL-853_125b 3566 chr3R 25296121 25296193 chr3R 25296252 25296324 20 128 17.0 18.5 17.8 1.1 203 chr3R 25296121 intergenic CG31097 - chr3R 25296222 3` UTR CG31097 - chr3R 25296324 3` UTR CG31097 - chr3R_20_25295001 chr3R_25295001 RAL-853_125b 3567 chr3R 25300627 25300694 chr3R 25300793 25300860 13 166 18.5 22.0 20.2 0.6 233 chr3R 25300627 intergenic CG13659 + chr3R 25300744 intergenic CG13659 + chr3R 25300860 intergenic CG13659 + chr3R_13_25300001 chr3R_25300001 RAL-853_125b 3568 chr3R 25301095 25301166 chr3R 25301545 25301616 16 450 37.0 33.5 35.2 0.4 521 chr3R 25301095 exon CG13659 + chr3R 25301356 exon CG13659 + chr3R 25301616 exon CG13659 + chr3R_16_25300001 chr3R_25300001 RAL-853_125b 3569 chr3R 25317747 25317818 chr3R 25317877 25317948 7 130 27.5 28.5 28.0 0.2 201 chr3R 25317747 exon CG10553 - chr3R 25317848 intron CG10553 - chr3R 25317948 exon CG10553 - chr3R_7_25315001 chr3R_25315001 RAL-853_125b 3570 chr3R 25324349 25324366 chr3R 25328964 25328981 Doc 5 4615 12.5 30.0 21.2 0.2 4632 chr3R 25324349 exon CHKov1 - chr3R 25326665 intron CHKov1 - chr3R 25328981 exon CHKov1 - chr3R_5_25325001 chr3R_25325001 RAL-853_125b 3571 chr3R 25324371 25324383 chr3R 25328962 25328998 Doc 5 4610 9.0 30.0 19.5 0.2 4627 chr3R 25324371 exon CHKov1 - chr3R 25326684 intron CHKov1 - chr3R 25328998 exon CHKov1 - chr3R_5_25325001 chr3R_25325001 RAL-853_125b 3572 chr3R 25334398 25334416 chr3R 25334573 25334591 7 174 30.0 29.0 29.5 0.2 193 chr3R 25334398 intron CG10669 - chr3R 25334494 exon CG10669 - chr3R 25334591 exon CG10669 - chr3R_7_25330001 chr3R_25330001 RAL-853_125b 3573 chr3R 25334417 25334457 chr3R 25334552 25334601 14 163 24.0 26.5 25.2 0.5 184 chr3R 25334417 intron CG10669 - chr3R 25334509 exon CG10669 - chr3R 25334601 exon CG10669 - chr3R_14_25330001 chr3R_25330001 RAL-853_125b 3574 chr3R 25368427 25368500 chr3R 25368595 25368672 22 169 8.5 0.0 4.2 4.2 245 chr3R 25368427 intron Fur1 - chr3R 25368550 intron Fur1 - chr3R 25368672 intron Fur1 - chr3R_22_25365001 chr3R_25365001 RAL-853_125b 3575 chr3R 25369824 25369894 chr3R 25369958 25370028 9 134 25.5 25.0 25.2 0.3 204 chr3R 25369824 intron Fur1 - chr3R 25369926 intron Fur1 - chr3R 25370028 intron Fur1 - chr3R_9_25365001 chr3R_25365001 RAL-853_125b 3576 chr3R 25374797 25374869 chr3R 25374925 25374994 16 128 20.0 17.5 18.8 0.8 197 chr3R 25374797 intron Fur1 - chr3R 25374896 intron Fur1 - chr3R 25374994 intron Fur1 - chr3R_16_25370001 chr3R_25370001 RAL-853_125b 3577 chr3R 25405351 25405398 chr3R 25405478 25405525 5 126 6.5 10.0 8.2 0.5 174 chr3R 25405351 intron Fur1 - chr3R 25405438 intron Fur1 - chr3R 25405525 intron Fur1 - chr3R_5_25405001 chr3R_25405001 RAL-853_125b 3578 chr3R 25410159 25410169 chr3R 25410285 25410295 4 126 26.5 23.0 24.8 0.2 136 chr3R 25410159 intron Fur1 - chr3R 25410227 intron Fur1 - chr3R 25410295 intron Fur1 - chr3R_4_25410001 chr3R_25410001 RAL-853_125b 3579 chr3R 25419006 25419031 chr3R 25419140 25419165 6 134 22.5 18.0 20.2 0.3 159 chr3R 25419006 intron Fur1 - chr3R 25419086 intron Fur1 - chr3R 25419165 intron Fur1 - chr3R_6_25415001 chr3R_25415001 RAL-853_125b 3580 chr3R 25425980 25426038 chr3R 25426107 25426155 6 121 25.0 27.5 26.2 0.2 175 chr3R 25425980 intron Fur1 - chr3R 25426068 intron Fur1 - chr3R 25426155 intron Fur1 - chr3R_6_25425001 chr3R_25425001 RAL-853_125b 3581 chr3R 25454345 25454351 chr3R 25454505 25454511 4 160 28.0 22.5 25.2 0.2 166 chr3R 25454345 intron Fur1 - chr3R 25454428 intron Fur1 - chr3R 25454511 intron Fur1 - chr3R_4_25450001 chr3R_25450001 RAL-853_125b 3582 chr3R 25454861 25454902 chr3R 25455001 25455042 6 140 16.0 18.5 17.2 0.3 181 chr3R 25454861 intron Fur1 - chr3R 25454952 intron Fur1 - chr3R 25455042 intron Fur1 - chr3R_6_25450001 chr3R_25450001 RAL-853_125b 3583 chr3R 25514399 25514448 chr3R 25514529 25514579 4 131 16.5 22.0 19.2 0.2 180 chr3R 25514399 intergenic not near genes chr3R 25514489 intergenic not near genes chr3R 25514579 intergenic not near genes chr3R_4_25510001 chr3R_25510001 RAL-853_125b 3584 chr3R 25527995 25528030 chr3R 25528148 25528183 5 152 31.0 36.0 33.5 0.1 188 chr3R 25527995 intron msi + chr3R 25528089 intron msi + chr3R 25528183 intron msi + chr3R_5_25525001 chr3R_25525001 RAL-853_125b 3585 chr3R 25571840 25571873 chr3R 25571978 25572011 9 138 32.5 36.0 34.2 0.3 171 chr3R 25571840 intron msi + chr3R 25571926 intron msi + chr3R 25572011 intron msi + chr3R_9_25570001 chr3R_25570001 RAL-853_125b 3586 chr3R 25608432 25608481 chr3R 25608574 25608634 12 147 15.0 10.5 12.8 0.9 202 chr3R 25608432 intron ymp - chr3R 25608533 intron ymp - chr3R 25608634 intron ymp - chr3R_12_25605001 chr3R_25605001 RAL-853_125b 3587 chr3R 25612867 25612941 chr3R 25612994 25613054 22 125 29.0 28.0 28.5 0.7 187 chr3R 25612867 intron Npl4 - chr3R 25612960 intron Npl4 - chr3R 25613054 intron Npl4 - chr3R_22_25610001 chr3R_25610001 RAL-853_125b 3588 chr3R 25652274 25652339 chr3R 25652401 25652466 13 127 22.5 23.5 23.0 0.5 192 chr3R 25652274 intergenic not near genes chr3R 25652370 intergenic not near genes chr3R 25652466 intergenic not near genes chr3R_13_25650001 chr3R_25650001 RAL-853_125b 3589 chr3R 25661226 25661297 chr3R 25661355 25661426 18 129 15.0 13.0 14.0 1.2 200 chr3R 25661226 5` UTR Tnks - chr3R 25661326 intergenic Tnks -,CR45208 -,RASSF8 + chr3R 25661426 intergenic Tnks -,CR45208 -,RASSF8 + chr3R_18_25660001 chr3R_25660001 RAL-853_125b 3590 chr3R 25671193 25671267 chr3R 25671341 25671416 7 149 20.5 15.5 18.0 0.4 223 chr3R 25671193 intron Lgr3 + chr3R 25671304 intron Lgr3 + chr3R 25671416 intron Lgr3 + chr3R_7_25670001 chr3R_25670001 RAL-853_125b 3591 chr3R 25701859 25701923 chr3R 25702049 25702120 19 193 22.5 24.0 23.2 0.8 261 chr3R 25701859 intron LpR2 - chr3R 25701990 intron LpR2 - chr3R 25702120 intron LpR2 - chr3R_19_25700001 chr3R_25700001 RAL-853_125b 3592 chr3R 25725788 25725853 chr3R 25734998 25735063 roo 20 9210 8.0 7.0 7.5 2.4 9275 chr3R 25725788 intron LpR2 - chr3R 25730426 intron LpR2 - chr3R 25735063 intron LpR2 - chr3R_20_25730001 chr3R_25730001 RAL-853_125b 3593 chr3R 25738590 25738657 chr3R 25738728 25738795 13 137 19.0 15.0 17.0 0.7 205 chr3R 25738590 intron LpR2 - chr3R 25738692 intron LpR2 - chr3R 25738795 intron LpR2 - chr3R_13_25735001 chr3R_25735001 RAL-853_125b 3594 chr3R 25765838 25765885 chr3R 25765967 25766014 7 127 26.5 18.0 22.2 0.3 176 chr3R 25765838 intergenic not near genes chr3R 25765926 intergenic not near genes chr3R 25766014 intergenic not near genes chr3R_7_25765001 chr3R_25765001 RAL-853_125b 3595 chr3R 25765886 25765890 chr3R 25765965 25766000 5 114 26.0 18.5 22.2 0.2 114 chr3R 25765886 intergenic not near genes chr3R 25765943 intergenic not near genes chr3R 25766000 intergenic not near genes chr3R_5_25765001 chr3R_25765001 RAL-853_125b 3596 chr3R 25781369 25781403 chr3R 25781533 25781567 5 162 18.5 15.0 16.8 0.3 198 chr3R 25781369 intergenic not near genes chr3R 25781468 intergenic not near genes chr3R 25781567 intergenic not near genes chr3R_5_25780001 chr3R_25780001 RAL-853_125b 3597 chr3R 25789819 25789885 chr3R 25789956 25789972 6 128 30.5 27.0 28.8 0.2 153 chr3R 25789819 3` UTR CG31093 - chr3R 25789896 3` UTR CG31093 - chr3R 25789972 exon CG31093 - chr3R_6_25785001 chr3R_25785001 RAL-853_125b 3598 chr3R 25818315 25818323 chr3R 25818446 25818448 4 130 25.5 23.0 24.2 0.2 133 chr3R 25818315 intergenic not near genes chr3R 25818382 intergenic not near genes chr3R 25818448 intergenic not near genes chr3R_4_25815001 chr3R_25815001 RAL-853_125b 3599 chr3R 25818325 25818378 chr3R 25818442 25818509 9 125 25.0 22.5 23.8 0.4 184 chr3R 25818325 intergenic not near genes chr3R 25818417 intergenic not near genes chr3R 25818509 intergenic not near genes chr3R_9_25815001 chr3R_25815001 RAL-853_125b 3600 chr3R 25832653 25832715 chr3R 25841885 25841946 roo 21 9231 9.0 13.5 11.2 1.7 9293 chr3R 25832653 exon alpha4GT2 + chr3R 25837300 intron alpha4GT2 + chr3R 25841946 exon alpha4GT2 + chr3R_21_25835001 chr3R_25835001 RAL-853_125b 3601 chr3R 25843598 25843660 chr3R 25843778 25843840 11 180 17.0 22.0 19.5 0.5 242 chr3R 25843598 intergenic CR45653 + chr3R 25843719 intergenic CR45653 + chr3R 25843840 intergenic CR45653 + chr3R_11_25840001 chr3R_25840001 RAL-853_125b 3602 chr3R 25846099 25846153 chr3R 25846246 25846300 9 147 18.5 23.5 21.0 0.4 201 chr3R 25846099 5` UTR CR45654 + chr3R 25846200 5` UTR CR45654 + chr3R 25846300 5` UTR CR45654 + chr3R_9_25845001 chr3R_25845001 RAL-853_125b 3603 chr3R 25905591 25905644 chr3R 25905744 25905788 15 152 7.5 5.0 6.2 2.1 197 chr3R 25905591 intron CR43259 - chr3R 25905690 intron CR43259 - chr3R 25905788 intron CR43259 - chr3R_15_25905001 chr3R_25905001 RAL-853_125b 3604 chr3R 25913055 25913115 chr3R 25913201 25913261 12 145 19.0 22.5 20.8 0.6 206 chr3R 25913055 intron CG42235 + chr3R 25913158 intron CG42235 + chr3R 25913261 intron CG42235 + chr3R_12_25910001 chr3R_25910001 RAL-853_125b 3605 chr3R 25997202 25997266 chr3R 25997339 25997403 8 137 16.5 16.0 16.2 0.5 201 chr3R 25997202 intergenic CG43116 -,E(spl)mdelta-HLH + chr3R 25997302 intergenic CG43116 -,E(spl)mdelta-HLH + chr3R 25997403 intergenic E(spl)mdelta-HLH +,CG43116 - chr3R_8_25995001 chr3R_25995001 RAL-853_125b 3606 chr3R 26060366 26060429 chr3R 26060502 26060565 18 136 24.0 22.5 23.2 0.7 199 chr3R 26060366 intron CG14544 + chr3R 26060466 intron CG14544 + chr3R 26060565 intron CG14544 + chr3R_18_26060001 chr3R_26060001 RAL-853_125b 3607 chr3R 26063171 26063184 chr3R 26063315 26063328 4 144 29.5 18.5 24.0 0.2 157 chr3R 26063171 intergenic CG14551 - chr3R 26063250 intergenic CG14551 - chr3R 26063328 intergenic CG14551 - chr3R_4_26060001 chr3R_26060001 RAL-853_125b 3608 chr3R 26108780 26108826 chr3R 26117413 26117425 Tirant 6 8626 8.0 0.5 4.2 1.2 8645 chr3R 26108780 5` UTR CG31324 + chr3R 26113102 intron CG31324 + chr3R 26117425 intron CG31324 + chr3R_6_26110001 chr3R_26110001 RAL-853_125b 3609 chr3R 26121899 26121968 chr3R 26122046 26122115 4 147 26.5 23.0 24.8 0.2 216 chr3R 26121899 intron CG31324 + chr3R 26122007 intron CG31324 + chr3R 26122115 intron CG31324 + chr3R_4_26120001 chr3R_26120001 RAL-853_125b 3610 chr3R 26122413 26122480 chr3R 26122539 26122606 18 125 10.5 12.5 11.5 1.4 193 chr3R 26122413 intron CG31324 + chr3R 26122510 intron CG31324 + chr3R 26122606 intron CG31324 + chr3R_18_26120001 chr3R_26120001 RAL-853_125b 3611 chr3R 26123582 26123631 chr3R 26123819 26123886 6 246 24.0 25.0 24.5 0.2 304 chr3R 26123582 intron CG31324 + chr3R 26123734 intron CG31324 + chr3R 26123886 intron CG31324 + chr3R_6_26120001 chr3R_26120001 RAL-853_125b 3612 chr3R 26126503 26126569 chr3R 26126639 26126705 12 135 22.5 25.0 23.8 0.5 202 chr3R 26126503 intron CG31324 + chr3R 26126604 intron CG31324 + chr3R 26126705 intron,5` UTR CG31324 +,CG14556 + chr3R_12_26125001 chr3R_26125001 RAL-853_125b 3613 chr3R 26166136 26166200 chr3R 26166265 26166336 9 135 12.0 12.5 12.2 0.7 200 chr3R 26166136 intergenic not near genes chr3R 26166236 intergenic not near genes chr3R 26166336 intergenic not near genes chr3R_9_26165001 chr3R_26165001 RAL-853_125b 3614 chr3R 26229190 26229225 chr3R 26229310 26229360 5 133 23.0 16.5 19.8 0.2 170 chr3R 26229190 intergenic not near genes chr3R 26229275 intergenic not near genes chr3R 26229360 intergenic not near genes chr3R_5_26225001 chr3R_26225001 RAL-853_125b 3615 chr3R 26235450 26235514 chr3R 26235577 26235646 10 129 15.5 21.5 18.5 0.5 196 chr3R 26235450 5` UTR CR42745 + chr3R 26235548 5` UTR CR42745 + chr3R 26235646 intron CR42745 + chr3R_10_26235001 chr3R_26235001 RAL-853_125b 3616 chr3R 26265768 26265838 chr3R 26265906 26265934 17 132 27.0 30.0 28.5 0.6 166 chr3R 26265768 intron CG6154 + chr3R 26265851 intron CG6154 + chr3R 26265934 intron CG6154 + chr3R_17_26265001 chr3R_26265001 RAL-853_125b 3617 chr3R 26284199 26284246 chr3R 26284358 26284403 8 158 18.5 16.0 17.2 0.4 204 chr3R 26284199 intergenic not near genes chr3R 26284301 intergenic not near genes chr3R 26284403 intergenic not near genes chr3R_8_26280001 chr3R_26280001 RAL-853_125b 3618 chr3R 26287375 26287412 chr3R 26287513 26287550 12 138 27.0 25.5 26.2 0.4 175 chr3R 26287375 intergenic not near genes chr3R 26287462 intergenic not near genes chr3R 26287550 intergenic not near genes chr3R_12_26285001 chr3R_26285001 RAL-853_125b 3619 chr3R 26292066 26292120 chr3R 26292196 26292250 20 128 17.5 14.5 16.0 1.2 184 chr3R 26292066 intergenic not near genes chr3R 26292158 intergenic not near genes chr3R 26292250 intergenic not near genes chr3R_20_26290001 chr3R_26290001 RAL-853_125b 3620 chr3R 26294677 26294742 chr3R 26294805 26294870 14 128 13.5 20.0 16.8 0.8 193 chr3R 26294677 intergenic not near genes chr3R 26294774 intergenic not near genes chr3R 26294870 intergenic not near genes chr3R_14_26290001 chr3R_26290001 RAL-853_125b 3621 chr3R 26326652 26326677 chr3R 26326780 26326800 7 127 6.5 3.5 5.0 1.2 148 chr3R 26326652 intron CG33970 + chr3R 26326726 intron CG33970 + chr3R 26326800 intron CG33970 + chr3R_7_26325001 chr3R_26325001 RAL-853_125b 3622 chr3R 26374795 26374854 chr3R 26374947 26375006 6 152 13.5 22.0 17.8 0.3 211 chr3R 26374795 intergenic not near genes chr3R 26374900 intergenic not near genes chr3R 26375006 intergenic not near genes chr3R_6_26370001 chr3R_26370001 RAL-853_125b 3623 chr3R 26376284 26376347 chr3R 26385494 26385531 roo 26 9208 6.5 8.0 7.2 3.2 9247 chr3R 26376284 intergenic not near genes chr3R 26380908 intergenic not near genes chr3R 26385531 intergenic not near genes chr3R_26_26380001 chr3R_26380001 RAL-853_125b 3624 chr3R 26456613 26456674 chr3R 26456723 26456744 11 116 22.0 21.0 21.5 0.5 131 chr3R 26456613 intergenic CG14237 +,Pdf - chr3R 26456678 intergenic CG14237 + chr3R 26456744 intergenic CG14237 + chr3R_11_26455001 chr3R_26455001 RAL-853_125b 3625 chr3R 26509233 26509268 chr3R 26509596 26509631 6 363 27.0 37.5 32.2 0.2 398 chr3R 26509233 intron plum - chr3R 26509432 intron plum - chr3R 26509631 intron plum - chr3R_6_26505001 chr3R_26505001 RAL-853_125b 3626 chr3R 26510475 26510535 chr3R 26519580 26519640 roo 17 9106 2.0 8.0 5.0 2.8 9165 chr3R 26510475 intron plum - chr3R 26515058 intron plum - chr3R 26519640 intron,5` UTR plum -,CR45226 + chr3R_17_26515001 chr3R_26515001 RAL-853_125b 3627 chr3R 26528577 26528593 chr3R 26528719 26528722 5 141 18.0 12.5 15.2 0.3 145 chr3R 26528577 intron plum - chr3R 26528650 intron plum - chr3R 26528722 intron plum - chr3R_5_26525001 chr3R_26525001 RAL-853_125b 3628 chr3R 26540947 26541029 chr3R 26541077 26541158 10 129 14.0 15.0 14.5 0.6 211 chr3R 26540947 intron scrib + chr3R 26541052 intron scrib + chr3R 26541158 intron scrib + chr3R_10_26540001 chr3R_26540001 RAL-853_125b 3629 chr3R 26541679 26541745 chr3R 26541964 26542030 13 282 18.0 23.0 20.5 0.6 351 chr3R 26541679 intron scrib + chr3R 26541854 intron scrib + chr3R 26542030 intron scrib + chr3R_13_26540001 chr3R_26540001 RAL-853_125b 3630 chr3R 26542003 26542064 chr3R 26542144 26542205 19 140 22.0 18.5 20.2 0.9 202 chr3R 26542003 intron scrib + chr3R 26542104 intron scrib + chr3R 26542205 intron scrib + chr3R_19_26540001 chr3R_26540001 RAL-853_125b 3631 chr3R 26558284 26558347 chr3R 26565646 26565709 Stalker4 32 7358 11.5 11.0 11.2 2.6 7425 chr3R 26558284 intron scrib + chr3R 26561996 intron scrib + chr3R 26565709 intron scrib + chr3R_32_26560001 chr3R_26560001 RAL-853_125b 3632 chr3R 26574960 26575035 chr3R 26575089 26575144 14 125 21.5 20.5 21.0 0.6 184 chr3R 26574960 exon scrib + chr3R 26575052 intron scrib + chr3R 26575144 intron scrib + chr3R_14_26575001 chr3R_26575001 RAL-853_125b 3633 chr3R 26592674 26592730 chr3R 26593338 26593394 13 664 6.5 18.5 12.5 1.0 720 chr3R 26592674 intron scrib + chr3R 26593034 intron scrib + chr3R 26593394 intron scrib + chr3R_13_26590001 chr3R_26590001 RAL-853_125b 3634 chr3R 26604423 26604506 chr3R 26604554 26604589 24 112 9.0 9.0 9.0 2.4 166 chr3R 26604423 intergenic scrib + chr3R 26604506 intergenic scrib + chr3R 26604589 intergenic not near genes chr3R_24_26600001 chr3R_26600001 RAL-853_125b 3635 chr3R 26607698 26607765 chr3R 26607824 26607891 20 126 20.0 21.5 20.8 0.9 193 chr3R 26607698 5` UTR CR44951 + chr3R 26607794 5` UTR CR44951 + chr3R 26607891 5` UTR CR44951 + chr3R_20_26605001 chr3R_26605001 RAL-853_125b 3636 chr3R 26641586 26641661 chr3R 26641723 26641798 18 135 28.5 36.0 32.2 0.5 212 chr3R 26641586 intergenic not near genes chr3R 26641692 intergenic not near genes chr3R 26641798 intergenic not near genes chr3R_18_26640001 chr3R_26640001 RAL-853_125b 3637 chr3R 26642693 26642753 chr3R 26643136 26643197 jockey 24 443 11.0 9.5 10.2 2.1 504 chr3R 26642693 intergenic not near genes chr3R 26642945 intergenic not near genes chr3R 26643197 intergenic not near genes chr3R_24_26640001 chr3R_26640001 RAL-853_125b 3638 chr3R 26660599 26660673 chr3R 26660733 26660800 10 133 22.0 26.5 24.2 0.4 201 chr3R 26660599 intron beat-VII - chr3R 26660700 intron beat-VII - chr3R 26660800 intron beat-VII - chr3R_10_26660001 chr3R_26660001 RAL-853_125b 3639 chr3R 26669615 26669686 chr3R 26669747 26669818 29 132 15.5 17.5 16.5 1.7 203 chr3R 26669615 intron beat-VII - chr3R 26669716 intron beat-VII - chr3R 26669818 intron beat-VII - chr3R_29_26665001 chr3R_26665001 RAL-853_125b 3640 chr3R 26680845 26680917 chr3R 26680973 26681045 24 127 15.0 14.0 14.5 1.5 200 chr3R 26680845 intron beat-VII - chr3R 26680945 intron beat-VII - chr3R 26681045 intron beat-VII - chr3R_24_26680001 chr3R_26680001 RAL-853_125b 3641 chr3R 26710778 26710853 chr3R 26710912 26710987 17 131 10.0 10.0 10.0 1.5 209 chr3R 26710778 intron amon - chr3R 26710882 intron amon - chr3R 26710987 intron amon - chr3R_17_26710001 chr3R_26710001 RAL-853_125b 3642 chr3R 26770199 26770260 chr3R 26770326 26770387 18 125 10.5 9.0 9.8 1.7 188 chr3R 26770199 intergenic CR45563 + chr3R 26770293 intergenic CR45563 + chr3R 26770387 intergenic not near genes chr3R_18_26770001 chr3R_26770001 RAL-853_125b 3643 chr3R 26789550 26789624 chr3R 26789681 26789752 5 129 8.0 13.5 10.8 0.4 202 chr3R 26789550 intergenic not near genes chr3R 26789651 intergenic not near genes chr3R 26789752 intergenic not near genes chr3R_5_26785001 chr3R_26785001 RAL-853_125b 3644 chr3R 26796218 26796290 chr3R 26796357 26796429 21 137 22.0 22.0 22.0 0.9 211 chr3R 26796218 intergenic not near genes chr3R 26796324 intergenic not near genes chr3R 26796429 intergenic not near genes chr3R_21_26795001 chr3R_26795001 RAL-853_125b 3645 chr3R 26810506 26810572 chr3R 26811041 26811107 roo 31 534 7.0 9.0 8.0 3.4 601 chr3R 26810506 intron Tl + chr3R 26810806 intron Tl + chr3R 26811107 intron Tl + chr3R_31_26810001 chr3R_26810001 RAL-853_125b 3646 chr3R 26819713 26819749 chr3R 26819842 26819878 8 129 16.0 15.5 15.8 0.5 165 chr3R 26819713 intron Tl + chr3R 26819796 intron Tl + chr3R 26819878 intron Tl + chr3R_8_26815001 chr3R_26815001 RAL-853_125b 3647 chr3R 26830309 26830317 chr3R 26830661 26830669 5 352 8.0 3.5 5.8 0.7 360 chr3R 26830309 intron Tl + chr3R 26830489 intron Tl + chr3R 26830669 intron Tl + chr3R_5_26830001 chr3R_26830001 RAL-853_125b 3648 chr3R 26845526 26845598 chr3R 26845656 26845725 32 126 9.0 7.5 8.2 3.5 199 chr3R 26845526 intron Lerp - chr3R 26845626 intron Lerp - chr3R 26845725 intron Lerp - chr3R_32_26845001 chr3R_26845001 RAL-853_125b 3649 chr3R 26901463 26901503 chr3R 26901598 26901638 4 135 10.5 0.0 5.2 0.6 175 chr3R 26901463 intron T48 + chr3R 26901550 intron T48 + chr3R 26901638 intron T48 + chr3R_4_26900001 chr3R_26900001 RAL-853_125b 3650 chr3R 26985162 26985178 chr3R 26986267 26986282 6 1104 18.5 8.0 13.2 0.4 1120 chr3R 26985162 exon CG14253 + chr3R 26985722 3` UTR CG31075 - chr3R 26986282 exon CG31075 - chr3R_6_26985001 chr3R_26985001 RAL-853_125b 3651 chr3R 26985181 26985237 chr3R 26986265 26986325 18 1093 6.5 7.5 7.0 2.2 1144 chr3R 26985181 exon CG14253 + chr3R 26985753 exon CG31075 - chr3R 26986325 exon CG31075 - chr3R_18_26985001 chr3R_26985001 RAL-853_125b 3652 chr3R 26990847 26990918 chr3R 26990981 26991048 32 132 6.5 10.0 8.2 3.5 201 chr3R 26990847 intergenic not near genes chr3R 26990948 intergenic not near genes chr3R 26991048 intergenic not near genes chr3R_32_26990001 chr3R_26990001 RAL-853_125b 3653 chr3R 27007367 27007429 chr3R 27016552 27016614 roo 26 9185 13.5 6.5 10.0 2.4 9247 chr3R 27007367 intron RYa-R + chr3R 27011990 intron RYa-R + chr3R 27016614 intron RYa-R + chr3R_26_27010001 chr3R_27010001 RAL-853_125b 3654 chr3R 27027633 27027701 chr3R 27027767 27027833 18 133 5.5 5.0 5.2 2.9 200 chr3R 27027633 intron RYa-R + chr3R 27027733 intron RYa-R + chr3R 27027833 intron RYa-R + chr3R_18_27025001 chr3R_27025001 RAL-853_125b 3655 chr3R 27028680 27028756 chr3R 27028809 27028885 24 129 5.0 7.0 6.0 3.4 205 chr3R 27028680 intron RYa-R + chr3R 27028782 intron RYa-R + chr3R 27028885 intron RYa-R + chr3R_24_27025001 chr3R_27025001 RAL-853_125b 3656 chr3R 27051618 27051695 chr3R 27051759 27051834 12 140 2.5 0.0 1.2 5.5 216 chr3R 27051618 intron RYa-R + chr3R 27051726 intron RYa-R + chr3R 27051834 intron RYa-R + chr3R_12_27050001 chr3R_27050001 RAL-853_125b 3657 chr3R 27054473 27054538 chr3R 27054622 27054687 28 148 6.5 7.5 7.0 3.5 214 chr3R 27054473 intron RYa-R + chr3R 27054580 intron RYa-R + chr3R 27054687 intron RYa-R + chr3R_28_27050001 chr3R_27050001 RAL-853_125b 3658 chr3R 27091389 27091435 chr3R 27091526 27091572 27 134 5.0 10.5 7.8 3.1 183 chr3R 27091389 intergenic Cpr97Eb - chr3R 27091480 intergenic Cpr97Eb - chr3R 27091572 intergenic Cpr97Eb - chr3R_27_27090001 chr3R_27090001 RAL-853_125b 3659 chr3R 27091437 27091462 chr3R 27091523 27091599 27 134 2.5 10.0 6.2 3.8 162 chr3R 27091437 intergenic Cpr97Eb - chr3R 27091518 intergenic Cpr97Eb - chr3R 27091599 intergenic Cpr97Eb - chr3R_27_27090001 chr3R_27090001 RAL-853_125b 3660 chr3R 27140466 27140539 chr3R 27148126 27148199 412 20 7658 12.0 7.0 9.5 1.9 7733 chr3R 27140466 intron CG6051 - chr3R 27144332 intron CG6051 - chr3R 27148199 intron CG6051 - chr3R_20_27140001 chr3R_27140001 RAL-853_125b 3661 chr3R 27292253 27292262 chr3R 27292390 27292409 4 148 13.0 5.0 9.0 0.4 156 chr3R 27292253 intergenic CG3348 - chr3R 27292331 intergenic CG3348 - chr3R 27292409 intergenic CG3348 - chr3R_4_27290001 chr3R_27290001 RAL-853_125b 3662 chr3R 27292265 27292306 chr3R 27292397 27292438 20 146 4.5 6.0 5.2 3.2 173 chr3R 27292265 intergenic CG3348 - chr3R 27292352 intergenic CG3348 - chr3R 27292438 intergenic CG3348 - chr3R_20_27290001 chr3R_27290001 RAL-853_125b 3663 chr3R 27315948 27316013 chr3R 27316074 27316128 25 122 8.5 7.0 7.8 2.8 180 chr3R 27315948 intron CG3339 - chr3R 27316038 intron CG3339 - chr3R 27316128 exon CG3339 - chr3R_25_27315001 chr3R_27315001 RAL-853_125b 3664 chr3R 27329429 27329498 chr3R 27329556 27329625 12 127 6.5 4.0 5.2 1.9 196 chr3R 27329429 intergenic CG3330 - chr3R 27329527 intergenic CG3330 - chr3R 27329625 intergenic CG3330 - chr3R_12_27325001 chr3R_27325001 RAL-853_125b 3665 chr3R 27334616 27334660 chr3R 27334752 27334796 28 134 19.0 13.5 16.2 1.6 180 chr3R 27334616 intergenic not near genes chr3R 27334706 intergenic not near genes chr3R 27334796 intergenic not near genes chr3R_28_27330001 chr3R_27330001 RAL-853_125b 3666 chr3R 27334661 27334689 chr3R 27334742 27334755 10 120 11.5 9.5 10.5 0.9 94 chr3R 27334661 intergenic not near genes chr3R 27334708 intergenic not near genes chr3R 27334755 intergenic not near genes chr3R_10_27330001 chr3R_27330001 RAL-853_125b 3667 chr3R 27335898 27335939 chr3R 27336029 27336070 13 131 11.5 0.0 5.8 1.9 172 chr3R 27335898 intergenic not near genes chr3R 27335984 intergenic not near genes chr3R 27336070 intergenic not near genes chr3R_13_27335001 chr3R_27335001 RAL-853_125b 3668 chr3R 27342752 27342820 chr3R 27351383 27351451 Tirant 21 8630 9.0 8.5 8.8 2.1 8699 chr3R 27342752 intron CG42534 + chr3R 27347102 intron CG42534 + chr3R 27351451 intron CG42534 + chr3R_21_27345001 chr3R_27345001 RAL-853_125b 3669 chr3R 27393703 27393778 chr3R 27393833 27393912 22 132 5.0 2.5 3.8 4.6 209 chr3R 27393703 intron side - chr3R 27393808 intron side - chr3R 27393912 intron side - chr3R_22_27390001 chr3R_27390001 RAL-853_125b 3670 chr3R 27404896 27404944 chr3R 27405026 27405054 11 128 14.5 6.0 10.2 1.0 158 chr3R 27404896 intron side - chr3R 27404975 intron side - chr3R 27405054 intron side - chr3R_11_27400001 chr3R_27400001 RAL-853_125b 3671 chr3R 27404947 27404953 chr3R 27405021 27405082 4 113 11.0 5.5 8.2 0.4 135 chr3R 27404947 intron side - chr3R 27405014 intron side - chr3R 27405082 intron side - chr3R_4_27405001 chr3R_27405001 RAL-853_125b 3672 chr3R 27445208 27445224 chr3R 27445325 27445351 9 124 6.5 8.5 7.5 1.1 143 chr3R 27445208 intergenic not near genes chr3R 27445280 intergenic not near genes chr3R 27445351 intergenic not near genes chr3R_9_27445001 chr3R_27445001 RAL-853_125b 3673 chr3R 27445227 27445274 chr3R 27445324 27445401 15 122 5.0 8.5 6.8 1.9 174 chr3R 27445227 intergenic not near genes chr3R 27445314 intergenic not near genes chr3R 27445401 intergenic not near genes chr3R_15_27445001 chr3R_27445001 RAL-853_125b 3674 chr3R 27465225 27465296 chr3R 27465979 27466057 40 759 53.5 45.0 49.2 0.8 832 chr3R 27465225 exon CG13978 + chr3R 27465641 exon CG13978 + chr3R 27466057 exon CG13978 + chr3R_40_27465001 chr3R_27465001 RAL-853_125b 3675 chr3R 27464832 27464877 chr3R 27467010 27467055 17 2178 59.5 50.5 55.0 0.3 2223 chr3R 27464832 exon CG13978 + chr3R 27465944 exon CG13978 + chr3R 27467055 3` UTR CG13978 + chr3R_17_27465001 chr3R_27465001 RAL-853_125b 3676 chr3R 27468409 27468472 chr3R 27468875 27468938 18 465 5.5 7.5 6.5 2.4 529 chr3R 27468409 intergenic not near genes chr3R 27468674 intergenic not near genes chr3R 27468938 intergenic not near genes chr3R_18_27465001 chr3R_27465001 RAL-853_125b 3677 chr3R 27496541 27496602 chr3R 27496696 27496757 25 153 11.0 4.0 7.5 2.9 216 chr3R 27496541 intergenic not near genes chr3R 27496649 intergenic not near genes chr3R 27496757 intergenic not near genes chr3R_25_27495001 chr3R_27495001 RAL-853_125b 3678 chr3R 27506251 27506290 chr3R 27506383 27506422 13 132 0.0 9.0 4.5 2.4 171 chr3R 27506251 intergenic not near genes chr3R 27506336 intergenic not near genes chr3R 27506422 intergenic not near genes chr3R_13_27505001 chr3R_27505001 RAL-853_125b 3679 chr3R 27511208 27511273 chr3R 27511345 27511410 19 137 13.0 9.0 11.0 1.6 202 chr3R 27511208 intergenic not near genes chr3R 27511309 intergenic not near genes chr3R 27511410 intergenic not near genes chr3R_19_27510001 chr3R_27510001 RAL-853_125b 3680 chr3R 27521118 27521177 chr3R 27530377 27530436 roo 22 9259 10.5 8.5 9.5 2.1 9318 chr3R 27521118 intron CG12885 + chr3R 27525777 intron CG12885 + chr3R 27530436 intron CG12885 + chr3R_22_27525001 chr3R_27525001 RAL-853_125b 3681 chr3R 27660667 27660743 chr3R 27660795 27660843 22 124 7.0 10.0 8.5 2.3 176 chr3R 27660667 intergenic Mlc1 - chr3R 27660755 intergenic not near genes chr3R 27660843 intergenic not near genes chr3R_22_27660001 chr3R_27660001 RAL-853_125b 3682 chr3R 27706732 27706748 chr3R 27706859 27706875 6 127 17.0 15.0 16.0 0.4 143 chr3R 27706732 5` UTR CG12428 - chr3R 27706804 intergenic CG12428 -,CG12877 + chr3R 27706875 intergenic CG12428 -,CG12877 + chr3R_6_27705001 chr3R_27705001 RAL-853_125b 3683 chr3R 27706749 27706792 chr3R 27706855 27706918 19 125 14.0 14.5 14.2 1.2 169 chr3R 27706749 5` UTR CG12428 - chr3R 27706834 intergenic CG12428 -,CG12877 + chr3R 27706918 intergenic CG12428 -,CG12877 + chr3R_19_27705001 chr3R_27705001 RAL-853_125b 3684 chr3R 27725553 27725596 chr3R 27731046 27731089 I-element 8 5493 5.5 12.0 8.8 0.8 5536 chr3R 27725553 intergenic not near genes chr3R 27728321 intergenic not near genes chr3R 27731089 intergenic not near genes chr3R_8_27725001 chr3R_27725001 RAL-853_125b 3685 chr3R 27779220 27779283 chr3R 27779350 27779400 28 126 2.0 6.0 4.0 5.6 180 chr3R 27779220 exon CG34353 - chr3R 27779310 intron CG34353 - chr3R 27779400 intron CG34353 - chr3R_28_27775001 chr3R_27775001 RAL-853_125b 3686 chr3R 27791621 27791647 chr3R 27794801 27794838 Rt1c 12 3186 11.0 11.0 11.0 1.0 3217 chr3R 27791621 intron CG34353 - chr3R 27793230 intron CG34353 - chr3R 27794838 intron CG34353 - chr3R_12_27790001 chr3R_27790001 RAL-853_125b 3687 chr3R 27799886 27799963 chr3R 27800018 27800095 41 131 6.0 6.0 6.0 5.9 209 chr3R 27799886 intron CG34353 - chr3R 27799990 intron CG34353 - chr3R 27800095 intron CG34353 - chr3R_41_27795001 chr3R_27795001 RAL-853_125b 3688 chr3R 27840188 27840267 chr3R 27840373 27840442 14 183 0.0 0.0 0.0 14.0 254 chr3R 27840188 intron CG34353 - chr3R 27840315 intron CG34353 - chr3R 27840442 intron CG34353 - chr3R_14_27840001 chr3R_27840001 RAL-853_125b 3689 chr3R 27856719 27856785 chr3R 27858252 27858318 hopper2 27 1532 7.5 9.0 8.2 2.9 1599 chr3R 27856719 intron CG34353 - chr3R 27857518 intron CG34353 - chr3R 27858318 intron CG34353 - chr3R_27_27855001 chr3R_27855001 RAL-853_125b 3690 chr3R 27862935 27862974 chr3R 27868291 27868329 Transpac 10 5355 0.0 10.5 5.2 1.6 5394 chr3R 27862935 intron CG34353 - chr3R 27865632 intron CG34353 - chr3R 27868329 intron CG34353 - chr3R_10_27865001 chr3R_27865001 RAL-853_125b 3691 chr3R 27875659 27875724 chr3R 27882764 27882829 297 28 7105 9.5 10.0 9.8 2.6 7170 chr3R 27875659 intron CG34353 - chr3R 27879244 intron CG34353 - chr3R 27882829 intron CG34353 - chr3R_28_27875001 chr3R_27875001 RAL-853_125b 3692 chr3R 27970788 27970864 chr3R 27970927 27971003 6 138 10.0 3.5 6.8 0.8 215 chr3R 27970788 intron betaTub97EF - chr3R 27970896 intron betaTub97EF - chr3R 27971003 intron betaTub97EF - chr3R_6_27970001 chr3R_27970001 RAL-853_125b 3693 chr3R 28002860 28002925 chr3R 28002987 28003052 17 127 6.5 5.0 5.8 2.5 192 chr3R 28002860 intergenic not near genes chr3R 28002956 intergenic not near genes chr3R 28003052 intergenic not near genes chr3R_17_28000001 chr3R_28000001 RAL-853_125b 3694 chr3R 28035446 28035502 chr3R 28035573 28035629 17 126 5.0 10.5 7.8 1.9 183 chr3R 28035446 intron CG34362 + chr3R 28035538 intron CG34362 + chr3R 28035629 intron CG34362 + chr3R_17_28035001 chr3R_28035001 RAL-853_125b 3695 chr3R 28043815 28043878 chr3R 28043976 28044043 27 165 3.5 4.0 3.8 5.6 228 chr3R 28043815 intron CG34362 + chr3R 28043929 intron CG34362 + chr3R 28044043 intron CG34362 + chr3R_27_28040001 chr3R_28040001 RAL-853_125b 3696 chr3R 28068475 28068514 chr3R 28073965 28073974 I-element 8 5488 6.5 12.0 9.2 0.8 5499 chr3R 28068475 intron CG34362 + chr3R 28071224 intron CG34362 + chr3R 28073974 intron CG34362 + chr3R_8_28070001 chr3R_28070001 RAL-853_125b 3697 chr3R 28173623 28173695 chr3R 28181103 28181175 mdg1 20 7480 4.5 6.0 5.2 3.2 7552 chr3R 28173623 intron CG34354 + chr3R 28177399 intron CG34354 + chr3R 28181175 intron CG34354 + chr3R_20_28175001 chr3R_28175001 RAL-853_125b 3698 chr3R 28253296 28253359 chr3R 28255856 28255919 jockey 11 2557 9.5 8.0 8.8 1.1 2623 chr3R 28253296 intergenic not near genes chr3R 28254608 intergenic not near genes chr3R 28255919 intergenic not near genes chr3R_11_28250001 chr3R_28250001 RAL-853_125b 3699 chr3R 28282950 28283018 chr3R 28283629 28283693 41 679 10.5 12.5 11.5 3.3 743 chr3R 28282950 exon CG34436 + chr3R 28283322 exon CG34436 + chr3R 28283693 intergenic CG34437 +,CG34436 + chr3R_41_28280001 chr3R_28280001 RAL-853_125b 3700 chr3R 28302066 28302125 chr3R 28302555 28302614 jockey 27 489 10.5 12.5 11.5 2.2 548 chr3R 28302066 intergenic not near genes chr3R 28302340 intergenic not near genes chr3R 28302614 intergenic not near genes chr3R_27_28300001 chr3R_28300001 RAL-853_125b 3701 chr3R 28331491 28331520 chr3R 28331605 28331649 11 128 4.0 12.5 8.2 1.2 158 chr3R 28331491 intron larp - chr3R 28331570 intron larp - chr3R 28331649 intron larp - chr3R_11_28330001 chr3R_28330001 RAL-853_125b 3702 chr3R 28340992 28341063 chr3R 28341119 28341190 20 127 10.5 9.0 9.8 1.9 198 chr3R 28340992 intron Moca-cyp + chr3R 28341091 intron Moca-cyp + chr3R 28341190 intron Moca-cyp + chr3R_20_28340001 chr3R_28340001 RAL-853_125b 3703 chr3R 28352467 28352490 chr3R 28352857 28352880 11 390 26.0 11.0 18.5 0.6 413 chr3R 28352467 exon Or98b + chr3R 28352674 exon Or98b + chr3R 28352880 exon Or98b + chr3R_11_28350001 chr3R_28350001 RAL-853_125b 3704 chr3R 28352492 28352537 chr3R 28352851 28352927 28 389 13.0 10.0 11.5 2.2 435 chr3R 28352492 exon Or98b + chr3R 28352710 exon Or98b + chr3R 28352927 exon Or98b + chr3R_28_28350001 chr3R_28350001 RAL-853_125b 3705 chr3R 28387427 28387487 chr3R 28387585 28387645 21 157 9.5 6.0 7.8 2.4 218 chr3R 28387427 intergenic not near genes chr3R 28387536 intergenic not near genes chr3R 28387645 intergenic not near genes chr3R_21_28385001 chr3R_28385001 RAL-853_125b 3706 chr3R 28390074 28390082 chr3R 28390202 28390203 4 126 2.5 0.0 1.2 1.8 129 chr3R 28390074 intergenic not near genes chr3R 28390138 intergenic not near genes chr3R 28390203 intergenic not near genes chr3R_4_28390001 chr3R_28390001 RAL-853_125b 3707 chr3R 28390092 28390138 chr3R 28390192 28390266 24 112 2.0 1.0 1.5 9.6 174 chr3R 28390092 intergenic not near genes chr3R 28390179 intergenic not near genes chr3R 28390266 intergenic not near genes chr3R_24_28390001 chr3R_28390001 RAL-853_125b 3708 chr3R 28393651 28393717 chr3R 28393801 28393867 31 150 11.0 8.0 9.5 3.0 216 chr3R 28393651 intergenic not near genes chr3R 28393759 intergenic not near genes chr3R 28393867 intergenic not near genes chr3R_31_28390001 chr3R_28390001 RAL-853_125b 3709 chr3R 28416085 28416128 chr3R 28416244 28416295 34 164 18.0 12.0 15.0 2.1 210 chr3R 28416085 intergenic not near genes chr3R 28416190 intergenic not near genes chr3R 28416295 intergenic not near genes chr3R_34_28415001 chr3R_28415001 RAL-853_125b 3710 chr3R 28478375 28478444 chr3R 28478506 28478575 24 124 9.0 11.0 10.0 2.2 200 chr3R 28478375 intergenic not near genes chr3R 28478475 intergenic not near genes chr3R 28478575 intergenic not near genes chr3R_24_28475001 chr3R_28475001 RAL-853_125b 3711 chr3R 28479096 28479167 chr3R 28479229 28479300 19 132 10.0 6.0 8.0 2.1 204 chr3R 28479096 intergenic not near genes chr3R 28479198 intergenic not near genes chr3R 28479300 intergenic not near genes chr3R_19_28475001 chr3R_28475001 RAL-853_125b 3712 chr3R 28480275 28480330 chr3R 28480405 28480461 17 131 8.5 7.5 8.0 1.9 186 chr3R 28480275 intergenic not near genes chr3R 28480368 intergenic not near genes chr3R 28480461 intergenic not near genes chr3R_17_28480001 chr3R_28480001 RAL-853_125b 3713 chr3R 28484353 28484425 chr3R 28486220 28486292 108 1868 119.0 137.5 128.2 0.8 1939 chr3R 28484353 intergenic CG1894 + chr3R 28485322 exon CG1894 + chr3R 28486292 intergenic CG1894 + chr3R_108_28485001 chr3R_28485001 RAL-853_125b 3714 chr3R 28554654 28554719 chr3R 28554795 28554833 18 138 14.0 7.0 10.5 1.6 179 chr3R 28554654 intergenic not near genes chr3R 28554744 intergenic not near genes chr3R 28554833 intergenic not near genes chr3R_18_28550001 chr3R_28550001 RAL-853_125b 3715 chr3R 28633149 28633217 chr3R 28633279 28633347 29 130 10.0 10.0 10.0 2.6 198 chr3R 28633149 intron CG10011 - chr3R 28633248 intron CG10011 - chr3R 28633347 intron CG10011 - chr3R_29_28630001 chr3R_28630001 RAL-853_125b 3716 chr3R 28658447 28658524 chr3R 28658646 28658723 32 196 6.0 3.5 4.8 5.5 276 chr3R 28658447 intergenic not near genes chr3R 28658585 intergenic not near genes chr3R 28658723 intergenic not near genes chr3R_32_28655001 chr3R_28655001 RAL-853_125b 3717 chr3R 28758244 28758255 chr3R 28763911 28763922 roo 5 5667 22.0 0.0 11.0 0.4 5678 chr3R 28758244 intergenic aqrs - chr3R 28761083 intergenic not near genes chr3R 28763922 intergenic not near genes chr3R_5_28760001 chr3R_28760001 RAL-853_125b 3718 chr3R 28758282 28758295 chr3R 28771339 28771352 Stalker4 7 13057 11.0 5.5 8.2 0.8 13070 chr3R 28758282 intergenic aqrs - chr3R 28764817 intergenic not near genes chr3R 28771352 intergenic not near genes chr3R_7_28760001 chr3R_28760001 RAL-853_125b 3719 chr3R 28758299 28758318 chr3R 28771331 28771375 Stalker4 9 13054 8.0 4.5 6.2 1.2 13076 chr3R 28758299 intergenic aqrs - chr3R 28764837 intergenic not near genes chr3R 28771375 intergenic not near genes chr3R_9_28760001 chr3R_28760001 RAL-853_125b 3720 chr3R 28763907 28763922 chr3R 28771400 28771415 Stalker4 7 7493 0.0 15.5 7.8 0.8 7508 chr3R 28763907 intergenic not near genes chr3R 28767661 intergenic not near genes chr3R 28771415 intergenic not near genes chr3R_7_28765001 chr3R_28765001 RAL-853_125b 3721 chr3R 28792841 28792895 chr3R 28797968 28798040 jockey 16 5139 7.0 6.0 6.5 2.1 5199 chr3R 28792841 intergenic not near genes chr3R 28795440 intergenic not near genes chr3R 28798040 intergenic not near genes chr3R_16_28795001 chr3R_28795001 RAL-853_125b 3722 chr3R 28830843 28830913 chr3R 28830971 28831041 26 128 8.0 12.5 10.2 2.3 198 chr3R 28830843 intron WASp - chr3R 28830942 intron WASp - chr3R 28831041 intron WASp - chr3R_26_28830001 chr3R_28830001 RAL-853_125b 3723 chr3R 21907534 21907534 chr3R 28831801 28831803 79 6924266 39.0 27.0 33.0 2.3 6924269 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831803 intron WASp - chr3R_79_25365001 chr3R_25365001 RAL-853_125b 3724 chr3R 28862097 28862172 chr3R 28862224 28862299 24 127 8.5 6.0 7.2 2.9 202 chr3R 28862097 intron spg + chr3R 28862198 intron spg + chr3R 28862299 intron spg + chr3R_24_28860001 chr3R_28860001 RAL-853_125b 3725 chr3R 28882866 28882942 chr3R 28883033 28883107 24 166 6.5 1.5 4.0 4.8 241 chr3R 28882866 intron,exon CG33203 -,CG14527 + chr3R 28882986 intron CG33203 - chr3R 28883107 intron CG33203 - chr3R_24_28880001 chr3R_28880001 RAL-853_125b 3726 chr3R 28922715 28922775 chr3R 28922841 28922901 12 126 3.0 0.0 1.5 4.8 186 chr3R 28922715 3` UTR Doa + chr3R 28922808 intergenic Doa +,CG11828 + chr3R 28922901 intergenic Doa +,CG11828 + chr3R_12_28920001 chr3R_28920001 RAL-853_125b 3727 chr3R 28950203 28950248 chr3R 28950334 28950379 8 131 12.5 3.0 7.8 0.9 176 chr3R 28950203 intron CG14521 - chr3R 28950291 intron CG14521 - chr3R 28950379 intron CG14521 - chr3R_8_28950001 chr3R_28950001 RAL-853_125b 3728 chr3R 29006850 29006862 chr3R 29006977 29006984 6 126 21.5 16.0 18.8 0.3 134 chr3R 29006850 intron wat - chr3R 29006917 intron wat - chr3R 29006984 intron wat - chr3R_6_29005001 chr3R_29005001 RAL-853_125b 3729 chr3R 29006864 29006868 chr3R 29006970 29006995 4 122 18.0 14.0 16.0 0.2 131 chr3R 29006864 intron wat - chr3R 29006930 intron wat - chr3R 29006995 intron wat - chr3R_4_29005001 chr3R_29005001 RAL-853_125b 3730 chr3R 29009908 29009980 chr3R 29010064 29010136 36 156 3.5 8.0 5.8 5.3 228 chr3R 29009908 intron wat - chr3R 29010022 intron wat - chr3R 29010136 intron wat - chr3R_36_29010001 chr3R_29010001 RAL-853_125b 3731 chr3R 21907534 21907534 chr3R 29013340 29013340 4 7105806 39.0 43.0 41.0 0.1 7105806 chr3R 21907534 intergenic CG6678 + chr3R 25460437 intron Fur1 - chr3R 29013340 intron wat - chr3R_4_25460001 chr3R_25460001 RAL-853_125b 3732 chr3R 29032699 29032732 chr3R 29032826 29032858 11 127 17.5 13.5 15.5 0.7 159 chr3R 29032699 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032778 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032858 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_11_29030001 chr3R_29030001 RAL-853_125b 3733 chr3R 29032738 29032777 chr3R 29032822 29032910 10 127 9.5 14.0 11.8 0.8 172 chr3R 29032738 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032824 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032910 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_10_29030001 chr3R_29030001 RAL-853_125b 3734 chr3R 29034022 29034096 chr3R 29034463 29034538 10 443 4.5 8.0 6.2 1.4 516 chr3R 29034022 5` UTR CR45044 + chr3R 29034280 intergenic CR45044 +,beta4GalNAcTB -,Cpsf100 + chr3R 29034538 intergenic Cpsf100 +,CR45044 + chr3R_10_29030001 chr3R_29030001 RAL-853_125b 3735 chr3R 29053687 29053766 chr3R 29054247 29054326 11 560 3.5 3.5 3.5 2.4 639 chr3R 29053687 exon CG11842 + chr3R 29054006 intergenic CG11842 +,CG11843 + chr3R 29054326 intergenic CG11843 +,CG11842 + chr3R_11_29050001 chr3R_29050001 RAL-853_125b 3736 chr3R 29070009 29070074 chr3R 29070140 29070205 25 131 9.0 8.5 8.8 2.6 196 chr3R 29070009 intron CG11873 + chr3R 29070107 intron CG11873 + chr3R 29070205 intron CG11873 + chr3R_25_29070001 chr3R_29070001 RAL-853_125b 3737 chr3R 29076082 29076148 chr3R 29076309 29076364 14 219 5.5 5.5 5.5 2.2 282 chr3R 29076082 intron CG11873 + chr3R 29076223 intron CG11873 + chr3R 29076364 intron CG11873 + chr3R_14_29075001 chr3R_29075001 RAL-853_125b 3738 chr3R 29079342 29079410 chr3R 29080764 29080832 NOF 29 1421 5.5 7.0 6.2 4.0 1490 chr3R 29079342 intron CG11873 + chr3R 29080087 intron CG11873 + chr3R 29080832 intron CG11873 + chr3R_29_29080001 chr3R_29080001 RAL-853_125b 3739 chr3R 29091389 29091427 chr3R 29091520 29091552 14 136 12.5 8.5 10.5 1.2 163 chr3R 29091389 intron CG11873 + chr3R 29091470 intron CG11873 + chr3R 29091552 intron CG11873 + chr3R_14_29090001 chr3R_29090001 RAL-853_125b 3740 chr3R 29203799 29203820 chr3R 29203929 29203950 9 129 19.0 0.0 9.5 0.9 151 chr3R 29203799 5` UTR CG14508 - chr3R 29203874 intron CG14508 - chr3R 29203950 intron CG14508 - chr3R_9_29200001 chr3R_29200001 RAL-853_125b 3741 chr3R 29211166 29211218 chr3R 29211333 29211370 24 162 0.0 18.0 9.0 2.4 204 chr3R 29211166 intergenic not near genes chr3R 29211268 intergenic not near genes chr3R 29211370 intergenic not near genes chr3R_24_29210001 chr3R_29210001 RAL-853_125b 3742 chr3R 29237224 29237242 chr3R 29239295 29239312 7 2070 58.5 11.5 35.0 0.2 2088 chr3R 29237224 exon CG11951 - chr3R 29238268 intron CG11951 - chr3R 29239312 exon CG31427 - chr3R_7_29235001 chr3R_29235001 RAL-853_125b 3743 chr3R 29237243 29237271 chr3R 29239269 29239337 14 2067 51.5 6.0 28.8 0.5 2094 chr3R 29237243 exon CG11951 - chr3R 29238290 intron CG11951 - chr3R 29239337 exon CG31427 - chr3R_14_29235001 chr3R_29235001 RAL-853_125b 3744 chr3R 29238732 29238780 chr3R 29238896 29238944 17 161 4.0 10.0 7.0 2.1 212 chr3R 29238732 intergenic CG11951 -,CG31427 - chr3R 29238838 3` UTR CG31427 - chr3R 29238944 3` UTR CG31427 - chr3R_17_29235001 chr3R_29235001 RAL-853_125b 3745 chr3R 29239212 29239242 chr3R 29245522 29245582 14 6330 6.0 50.5 28.2 0.5 6370 chr3R 29239212 exon CG31427 - chr3R 29242397 exon CG31445 - chr3R 29245582 exon SP1029 - chr3R_14_29240001 chr3R_29240001 RAL-853_125b 3746 chr3R 29249858 29249904 chr3R 29249997 29250043 7 139 0.0 2.0 1.0 3.5 185 chr3R 29249858 intron SP1029 - chr3R 29249950 intron SP1029 - chr3R 29250043 intron SP1029 - chr3R_7_29245001 chr3R_29245001 RAL-853_125b 3747 chr3R 29276837 29276908 chr3R 29277829 29277891 17 985 8.5 0.0 4.2 3.3 1054 chr3R 29276837 3` UTR CR45568 - chr3R 29277364 intergenic CR45568 - chr3R 29277891 intergenic not near genes chr3R_17_29275001 chr3R_29275001 RAL-853_125b 3748 chr3R 29282763 29282815 chr3R 29282897 29282949 19 131 9.0 13.5 11.2 1.6 186 chr3R 29282763 intergenic not near genes chr3R 29282856 intergenic not near genes chr3R 29282949 intergenic not near genes chr3R_19_29280001 chr3R_29280001 RAL-853_125b 3749 chr3R 29319811 29319851 chr3R 29320180 29320220 jockey 13 368 4.0 11.5 7.8 1.5 409 chr3R 29319811 intergenic Cnx99A - chr3R 29320016 intergenic Cnx99A - chr3R 29320220 intergenic not near genes chr3R_13_29320001 chr3R_29320001 RAL-853_125b 3750 chr3R 29322770 29322835 chr3R 29322898 29322963 14 128 7.0 1.5 4.2 2.7 193 chr3R 29322770 intergenic not near genes chr3R 29322866 intergenic not near genes chr3R 29322963 intergenic not near genes chr3R_14_29320001 chr3R_29320001 RAL-853_125b 3751 chr3R 29325476 29325500 chr3R 29325626 29325638 6 146 0.0 0.0 0.0 6.0 162 chr3R 29325476 intergenic not near genes chr3R 29325557 intergenic not near genes chr3R 29325638 intergenic not near genes chr3R_6_29325001 chr3R_29325001 RAL-853_125b 3752 chr3R 29334189 29334240 chr3R 29334309 29334326 21 121 11.5 11.0 11.2 1.7 137 chr3R 29334189 intergenic not near genes chr3R 29334258 intergenic not near genes chr3R 29334326 intergenic not near genes chr3R_21_29330001 chr3R_29330001 RAL-853_125b 3753 chr3R 29336325 29336352 chr3R 29336452 29336478 8 125 10.0 16.5 13.2 0.6 153 chr3R 29336325 intergenic not near genes chr3R 29336402 intergenic not near genes chr3R 29336478 intergenic not near genes chr3R_8_29335001 chr3R_29335001 RAL-853_125b 3754 chr3R 29406575 29406639 chr3R 29407911 29407971 jockey 20 1333 12.0 8.0 10.0 1.8 1396 chr3R 29406575 intron Ptp99A + chr3R 29407273 intron Ptp99A + chr3R 29407971 intron Ptp99A + chr3R_20_29405001 chr3R_29405001 RAL-853_125b 3755 chr3R 29429739 29429803 chr3R 29429867 29429931 27 120 3.0 6.0 4.5 4.9 192 chr3R 29429739 intron Ptp99A + chr3R 29429835 intron Ptp99A + chr3R 29429931 intron Ptp99A + chr3R_27_29425001 chr3R_29425001 RAL-853_125b 3756 chr3R 29433566 29433617 chr3R 29433707 29433758 20 139 16.5 12.5 14.5 1.3 192 chr3R 29433566 intron Ptp99A + chr3R 29433662 intron Ptp99A + chr3R 29433758 intron Ptp99A + chr3R_20_29430001 chr3R_29430001 RAL-853_125b 3757 chr3R 29433619 29433632 chr3R 29433698 29433768 10 129 12.5 11.0 11.8 0.8 149 chr3R 29433619 intron Ptp99A + chr3R 29433694 intron Ptp99A + chr3R 29433768 intron Ptp99A + chr3R_10_29430001 chr3R_29430001 RAL-853_125b 3758 chr3R 29447239 29447308 chr3R 29447372 29447441 35 132 1.5 8.5 5.0 5.8 202 chr3R 29447239 intron Ptp99A + chr3R 29447340 intron Ptp99A + chr3R 29447441 intron Ptp99A + chr3R_35_29445001 chr3R_29445001 RAL-853_125b 3759 chr3R 29449318 29449383 chr3R 29449446 29449511 26 128 10.5 11.5 11.0 2.2 193 chr3R 29449318 intron Ptp99A + chr3R 29449414 intron Ptp99A + chr3R 29449511 intron Ptp99A + chr3R_26_29445001 chr3R_29445001 RAL-853_125b 3760 chr3R 29452108 29452183 chr3R 29452236 29452261 17 110 8.0 6.5 7.2 2.1 153 chr3R 29452108 intron Ptp99A + chr3R 29452184 intron Ptp99A + chr3R 29452261 intron Ptp99A + chr3R_17_29450001 chr3R_29450001 RAL-853_125b 3761 chr3R 29498859 29498931 chr3R 29499039 29499111 30 180 7.5 3.5 5.5 4.6 252 chr3R 29498859 3` UTR CG2010 + chr3R 29498985 intergenic Trc8 -,CG2010 + chr3R 29499111 3` UTR Trc8 - chr3R_30_29495001 chr3R_29495001 RAL-853_125b 3762 chr3R 29505843 29505920 chr3R 29505970 29506047 27 127 10.0 7.0 8.5 2.8 204 chr3R 29505843 intergenic not near genes chr3R 29505945 intergenic not near genes chr3R 29506047 intergenic not near genes chr3R_27_29505001 chr3R_29505001 RAL-853_125b 3763 chr3R 29539380 29539451 chr3R 29539506 29539526 22 122 7.0 1.0 4.0 4.4 146 chr3R 29539380 intergenic not near genes chr3R 29539453 intergenic not near genes chr3R 29539526 intergenic not near genes chr3R_22_29535001 chr3R_29535001 RAL-853_125b 3764 chr3R 29590330 29590401 chr3R 29590473 29590544 37 141 12.0 11.0 11.5 3.0 214 chr3R 29590330 exon CG31041 - chr3R 29590437 intron CG31041 - chr3R 29590544 exon CG31041 - chr3R_37_29590001 chr3R_29590001 RAL-853_125b 3765 chr3R 29627518 29627709 chr3R 29627659 29627870 43 145 0.0 0.0 0.0 43.0 352 chr3R 29627518 intergenic not near genes chr3R 29627694 intergenic not near genes chr3R 29627870 intergenic not near genes chr3R_43_29625001 chr3R_29625001 RAL-853_125b 3766 chr3R 29639127 29639192 chr3R 29639282 29639347 37 153 7.0 9.0 8.0 4.1 220 chr3R 29639127 intron Dop1R2 - chr3R 29639237 intron Dop1R2 - chr3R 29639347 intron Dop1R2 - chr3R_37_29635001 chr3R_29635001 RAL-853_125b 3767 chr3R 29648961 29649014 chr3R 29649101 29649154 20 139 2.5 5.0 3.8 4.2 193 chr3R 29648961 intron Dop1R2 - chr3R 29649058 intron Dop1R2 - chr3R 29649154 intron Dop1R2 - chr3R_20_29645001 chr3R_29645001 RAL-853_125b 3768 chr3R 29702101 29702156 chr3R 29702232 29702289 13 132 12.5 0.0 6.2 1.8 188 chr3R 29702101 intergenic not near genes chr3R 29702195 intergenic not near genes chr3R 29702289 intergenic not near genes chr3R_13_29700001 chr3R_29700001 RAL-853_125b 3769 chr3R 29738233 29738293 chr3R 29739750 29739810 hobo 28 1517 6.0 12.5 9.2 2.7 1577 chr3R 29738233 intergenic CG1969 +,CG7598 + chr3R 29739022 intron CG1969 + chr3R 29739810 5` UTR CG1969 + chr3R_28_29735001 chr3R_29735001 RAL-853_125b 3770 chr3R 29760316 29760379 chr3R 29761567 29761630 pogo 18 1251 7.0 10.0 8.5 1.9 1314 chr3R 29760316 intergenic not near genes chr3R 29760973 intergenic not near genes chr3R 29761630 intergenic not near genes chr3R_18_29760001 chr3R_29760001 RAL-853_125b 3771 chr3R 29881983 29882045 chr3R 29891190 29891252 roo 20 9207 10.5 14.5 12.5 1.5 9269 chr3R 29881983 intron CG31038 + chr3R 29886618 intron CG31038 + chr3R 29891252 intron CG31038 + chr3R_20_29885001 chr3R_29885001 RAL-853_125b 3772 chr3R 29923654 29923694 chr3R 29925209 29925272 6 1559 42.0 42.0 42.0 0.1 1618 chr3R 29923654 intergenic Jon99Cii -,Jon99Ciii + chr3R 29924463 exon Jon99Cii - chr3R 29925272 3` UTR Jon99Ci - chr3R_6_29920001 chr3R_29920001 RAL-853_125b 3773 chr3R 29950527 29950595 chr3R 29950653 29950722 28 119 6.5 8.0 7.2 3.4 195 chr3R 29950527 intergenic TkR99D - chr3R 29950624 intergenic TkR99D - chr3R 29950722 intergenic TkR99D - chr3R_28_29950001 chr3R_29950001 RAL-853_125b 3774 chr3R 29959233 29959297 chr3R 29959355 29959426 38 124 5.0 7.5 6.2 5.3 193 chr3R 29959233 exon TkR99D - chr3R 29959330 intron TkR99D - chr3R 29959426 intron TkR99D - chr3R_38_29955001 chr3R_29955001 RAL-853_125b 3775 chr3R 29982436 29982471 chr3R 29982567 29982602 25 129 11.0 3.5 7.2 3.0 166 chr3R 29982436 intergenic not near genes chr3R 29982519 intergenic not near genes chr3R 29982602 intergenic not near genes chr3R_25_29980001 chr3R_29980001 RAL-853_125b 3776 chr3R 30025239 30025309 chr3R 30025365 30025435 4 126 1.0 3.5 2.2 1.2 196 chr3R 30025239 intron Axn + chr3R 30025337 intron Axn + chr3R 30025435 intron Axn + chr3R_4_30025001 chr3R_30025001 RAL-853_125b 3777 chr3R 30030391 30030461 chr3R 30030515 30030584 29 123 11.0 6.0 8.5 3.1 193 chr3R 30030391 intron Axn + chr3R 30030488 intron Axn + chr3R 30030584 intron Axn + chr3R_29_30030001 chr3R_30030001 RAL-853_125b 3778 chr3R 30032122 30032140 chr3R 30032251 30032259 4 124 18.0 10.5 14.2 0.3 137 chr3R 30032122 intron Axn + chr3R 30032190 intron Axn + chr3R 30032259 intron Axn + chr3R_4_30030001 chr3R_30030001 RAL-853_125b 3779 chr3R 30080938 30080993 chr3R 30081440 30081495 20 500 8.5 6.5 7.5 2.4 557 chr3R 30080938 intron sima + chr3R 30081216 intron sima + chr3R 30081495 intron sima + chr3R_20_30080001 chr3R_30080001 RAL-853_125b 3780 chr3R 30088567 30088641 chr3R 30088703 30088778 17 134 0.0 3.5 1.8 6.1 211 chr3R 30088567 intron sima + chr3R 30088672 intron sima + chr3R 30088778 intron sima + chr3R_17_30085001 chr3R_30085001 RAL-853_125b 3781 chr3R 16589025 16589025 chr3R 30107555 30107562 5 13518532 24.5 22.0 23.2 0.2 13518537 chr3R 16589025 intergenic not near genes chr3R 23348294 intron DNApol-epsilon + chr3R 30107562 intron sima + chr3R_5_23345001 chr3R_23345001 RAL-853_125b 3782 chr3R 30147806 30147873 chr3R 30147937 30148009 33 135 0.5 8.5 4.5 6.0 203 chr3R 30147806 intron AdoR - chr3R 30147908 intron AdoR - chr3R 30148009 intron AdoR - chr3R_33_30145001 chr3R_30145001 RAL-853_125b 3783 chr3R 30163309 30163372 chr3R 30163444 30163505 20 134 6.5 7.5 7.0 2.5 196 chr3R 30163309 intergenic not near genes chr3R 30163407 intergenic not near genes chr3R 30163505 intergenic not near genes chr3R_20_30160001 chr3R_30160001 RAL-853_125b 3784 chr3R 30170727 30170781 chr3R 30170864 30170918 23 137 9.5 16.0 12.8 1.7 191 chr3R 30170727 intron CG31028 - chr3R 30170822 intron CG31028 - chr3R 30170918 intron CG31028 - chr3R_23_30170001 chr3R_30170001 RAL-853_125b 3785 chr3R 30177696 30177770 chr3R 30177863 30177936 17 167 6.0 7.0 6.5 2.3 240 chr3R 30177696 5` UTR CG1983 - chr3R 30177816 intergenic CG15530 +,CG1983 - chr3R 30177936 5` UTR CG15530 + chr3R_17_30175001 chr3R_30175001 RAL-853_125b 3786 chr3R 30183168 30183231 chr3R 30183327 30183390 13 158 8.5 5.5 7.0 1.6 222 chr3R 30183168 intergenic not near genes chr3R 30183279 intergenic not near genes chr3R 30183390 intergenic CR44262 - chr3R_13_30180001 chr3R_30180001 RAL-853_125b 3787 chr3R 30193457 30193465 chr3R 30193592 30193600 4 135 7.0 9.0 8.0 0.4 143 chr3R 30193457 intergenic not near genes chr3R 30193528 intergenic not near genes chr3R 30193600 intergenic not near genes chr3R_4_30190001 chr3R_30190001 RAL-853_125b 3788 chr3R 30203347 30203356 chr3R 30203476 30203485 4 129 13.5 10.0 11.8 0.3 138 chr3R 30203347 intergenic CG9743 - chr3R 30203416 intergenic CG9743 - chr3R 30203485 intergenic CG9743 - chr3R_4_30200001 chr3R_30200001 RAL-853_125b 3789 chr3R 30203358 30203388 chr3R 30203472 30203517 8 127 7.0 10.0 8.5 0.8 159 chr3R 30203358 intergenic CG9743 - chr3R 30203438 intergenic CG9743 - chr3R 30203517 intergenic not near genes chr3R_8_30200001 chr3R_30200001 RAL-853_125b 3790 chr3R 30210526 30210674 chr3R 30210672 30210804 15 138 1.5 0.0 0.8 8.3 278 chr3R 30210526 intergenic Anp +,CecA1 + chr3R 30210665 intergenic CecA1 +,Anp + chr3R 30210804 intergenic CecA1 +,Anp + chr3R_15_30210001 chr3R_30210001 RAL-853_125b 3791 chr3R 30224600 30224673 chr3R 30224728 30224801 23 128 6.5 4.5 5.5 3.5 201 chr3R 30224600 intergenic not near genes chr3R 30224700 intergenic not near genes chr3R 30224801 intergenic not near genes chr3R_23_30220001 chr3R_30220001 RAL-853_125b 3792 chr3R 30238717 30238751 chr3R 30239931 30239966 1360 7 1214 12.0 0.0 6.0 1.0 1249 chr3R 30238717 intergenic not near genes chr3R 30239342 intergenic not near genes chr3R 30239966 intergenic not near genes chr3R_7_30235001 chr3R_30235001 RAL-853_125b 3793 chr3R 30252516 30252523 chr3R 30252710 30252725 10 201 23.0 20.5 21.8 0.4 209 chr3R 30252516 exon CG9682 + chr3R 30252620 exon CG9682 + chr3R 30252725 exon CG9682 + chr3R_10_30250001 chr3R_30250001 RAL-853_125b 3794 chr3R 30267925 30267998 chr3R 30268060 30268113 21 133 5.0 7.0 6.0 3.0 188 chr3R 30267925 intergenic not near genes chr3R 30268019 intergenic not near genes chr3R 30268113 intergenic not near genes chr3R_21_30265001 chr3R_30265001 RAL-853_125b 3795 chr3R 30269601 30269663 chr3R 30269734 30269796 18 132 0.0 0.0 0.0 18.0 195 chr3R 30269601 intergenic not near genes chr3R 30269698 intergenic not near genes chr3R 30269796 intergenic not near genes chr3R_18_30265001 chr3R_30265001 RAL-853_125b 3796 chr3R 30287723 30287776 chr3R 30287856 30287909 23 132 10.0 7.5 8.8 2.3 186 chr3R 30287723 intron hdc + chr3R 30287816 intron hdc + chr3R 30287909 intron hdc + chr3R_23_30285001 chr3R_30285001 RAL-853_125b 3797 chr3R 30317280 30317349 chr3R 30324920 30324991 roo 12 7640 0.5 1.5 1.0 6.0 7711 chr3R 30317280 intron hdc + chr3R 30321136 intron hdc + chr3R 30324991 intron hdc + chr3R_12_30320001 chr3R_30320001 RAL-853_125b 3798 chr3R 30330444 30330521 chr3R 30330575 30330582 29 125 5.0 7.0 6.0 4.1 138 chr3R 30330444 intron hdc + chr3R 30330513 intron hdc + chr3R 30330582 intron hdc + chr3R_29_30330001 chr3R_30330001 RAL-853_125b 3799 chr3R 30332404 30332479 chr3R 30332533 30332609 18 126 4.5 7.5 6.0 2.6 205 chr3R 30332404 intron hdc + chr3R 30332506 intron hdc + chr3R 30332609 intron hdc + chr3R_18_30330001 chr3R_30330001 RAL-853_125b 3800 chr3R 30347000 30347031 chr3R 30347134 30347153 17 131 7.5 20.0 13.8 1.1 153 chr3R 30347000 intron hdc + chr3R 30347076 intron hdc + chr3R 30347153 intron hdc + chr3R_17_30345001 chr3R_30345001 RAL-853_125b 3801 chr3R 30375497 30375562 chr3R 30383170 30383235 412 5 7672 6.0 6.5 6.2 0.7 7738 chr3R 30375497 intergenic not near genes chr3R 30379366 intergenic not near genes chr3R 30383235 intergenic not near genes chr3R_5_30375001 chr3R_30375001 RAL-853_125b 3802 chr3R 30396175 30396234 chr3R 30404491 30404550 roo 17 8316 7.5 5.0 6.2 2.4 8375 chr3R 30396175 intergenic not near genes chr3R 30400362 intergenic not near genes chr3R 30404550 5` UTR CR45570 + chr3R_17_30400001 chr3R_30400001 RAL-853_125b 3803 chr3R 30413013 30413092 chr3R 30413140 30413219 34 126 8.0 6.0 7.0 4.2 206 chr3R 30413013 intergenic not near genes chr3R 30413116 intergenic not near genes chr3R 30413219 intergenic not near genes chr3R_34_30410001 chr3R_30410001 RAL-853_125b 3804 chr3R 30480445 30480512 chr3R 30482943 30482963 jockey 25 2512 8.0 1.5 4.8 4.3 2518 chr3R 30480445 intron PH4alphaEFB + chr3R 30481704 intron PH4alphaEFB + chr3R 30482963 intron PH4alphaEFB + chr3R_25_30480001 chr3R_30480001 RAL-853_125b 3805 chr3R 30485024 30485071 chr3R 30485164 30485211 29 140 2.5 8.0 5.2 4.7 187 chr3R 30485024 intron PH4alphaEFB + chr3R 30485118 intron PH4alphaEFB + chr3R 30485211 intron PH4alphaEFB + chr3R_29_30485001 chr3R_30485001 RAL-853_125b 3806 chr3R 30488075 30488091 chr3R 30488204 30488220 10 129 8.0 1.0 4.5 1.8 145 chr3R 30488075 intergenic Jon99Fii - chr3R 30488148 intergenic Jon99Fii - chr3R 30488220 intergenic Jon99Fii - chr3R_10_30485001 chr3R_30485001 RAL-853_125b 3807 chr3R 30498346 30498425 chr3R 30498608 30498675 22 254 0.0 6.0 3.0 5.5 329 chr3R 30498346 intron PH4alphaNE1 - chr3R 30498510 intron PH4alphaNE1 - chr3R 30498675 intron PH4alphaNE1 - chr3R_22_30495001 chr3R_30495001 RAL-853_125b 3808 chr3R 30548975 30548982 chr3R 30549117 30549124 6 142 14.0 10.0 12.0 0.5 149 chr3R 30548975 intron tmod + chr3R 30549050 intron tmod + chr3R 30549124 intron tmod + chr3R_6_30545001 chr3R_30545001 RAL-853_125b 3809 chr3R 30548984 30549022 chr3R 30549110 30549164 10 137 7.0 8.5 7.8 1.1 180 chr3R 30548984 intron tmod + chr3R 30549074 intron tmod + chr3R 30549164 intron tmod + chr3R_10_30545001 chr3R_30545001 RAL-853_125b 3810 chr3R 30549023 30549037 chr3R 30549109 30549179 8 135 4.5 8.5 6.5 1.1 156 chr3R 30549023 intron tmod + chr3R 30549101 intron tmod + chr3R 30549179 intron tmod + chr3R_8_30545001 chr3R_30545001 RAL-853_125b 3811 chr3R 30571669 30571712 chr3R 30571799 30571833 17 127 6.0 9.0 7.5 2.0 164 chr3R 30571669 intron tmod + chr3R 30571751 intron tmod + chr3R 30571833 exon tmod + chr3R_17_30570001 chr3R_30570001 RAL-853_125b 3812 chr3R 30591269 30591339 chr3R 30591428 30591491 18 155 4.0 4.5 4.2 3.5 222 chr3R 30591269 intergenic not near genes chr3R 30591380 intergenic not near genes chr3R 30591491 intergenic not near genes chr3R_18_30590001 chr3R_30590001 RAL-853_125b 3813 chr3R 30627561 30627630 chr3R 30627691 30627760 33 126 11.0 8.5 9.8 3.1 199 chr3R 30627561 3` UTR CG2267 - chr3R 30627660 exon CG2267 - chr3R 30627760 exon CG2267 - chr3R_33_30625001 chr3R_30625001 RAL-853_125b 3814 chr3R 30634157 30634225 chr3R 30634298 30634366 29 140 10.0 7.5 8.8 3.0 209 chr3R 30634157 intergenic not near genes chr3R 30634262 intergenic not near genes chr3R 30634366 intergenic not near genes chr3R_29_30630001 chr3R_30630001 RAL-853_125b 3815 chr3R 30636356 30636426 chr3R 30636487 30636537 25 127 9.5 7.5 8.5 2.6 181 chr3R 30636356 intergenic not near genes chr3R 30636446 intergenic not near genes chr3R 30636537 intergenic not near genes chr3R_25_30635001 chr3R_30635001 RAL-853_125b 3816 chr3R 30679483 30679551 chr3R 30687002 30687070 blood 34 7518 10.0 8.5 9.2 3.3 7587 chr3R 30679483 intergenic not near genes chr3R 30683276 intergenic not near genes chr3R 30687070 intergenic not near genes chr3R_34_30680001 chr3R_30680001 RAL-853_125b 3817 chr3R 30689752 30689791 chr3R 30689878 30689917 14 126 4.0 10.0 7.0 1.8 165 chr3R 30689752 intergenic not near genes chr3R 30689834 intergenic not near genes chr3R 30689917 intergenic not near genes chr3R_14_30685001 chr3R_30685001 RAL-853_125b 3818 chr3R 30761299 30761331 chr3R 30761431 30761463 9 132 14.0 6.5 10.2 0.8 164 chr3R 30761299 intergenic not near genes chr3R 30761381 intergenic not near genes chr3R 30761463 intergenic not near genes chr3R_9_30760001 chr3R_30760001 RAL-853_125b 3819 chr3R 30855753 30855780 chr3R 30855891 30855918 6 138 5.0 3.0 4.0 1.2 165 chr3R 30855753 intergenic not near genes chr3R 30855836 intergenic not near genes chr3R 30855918 intergenic not near genes chr3R_6_30855001 chr3R_30855001 RAL-853_125b 3820 chr3R 30859356 30859423 chr3R 30859484 30859545 25 128 6.0 2.5 4.2 4.8 189 chr3R 30859356 intergenic not near genes chr3R 30859450 intergenic not near genes chr3R 30859545 intergenic not near genes chr3R_25_30855001 chr3R_30855001 RAL-853_125b 3821 chr3R 30946355 30946415 chr3R 30946501 30946549 10 143 0.0 0.0 0.0 10.0 194 chr3R 30946355 intergenic not near genes chr3R 30946452 intergenic not near genes chr3R 30946549 intergenic not near genes chr3R_10_30945001 chr3R_30945001 RAL-853_125b 3822 chr3R 30973083 30973164 chr3R 30973294 30973375 22 211 4.0 3.0 3.5 4.9 292 chr3R 30973083 intron 5-HT7 - chr3R 30973229 intron 5-HT7 - chr3R 30973375 intron 5-HT7 - chr3R_22_30970001 chr3R_30970001 RAL-853_125b 3823 chr3R 30991580 30991583 chr3R 30991714 30991717 4 134 9.0 10.0 9.5 0.4 137 chr3R 30991580 intron 5-HT7 - chr3R 30991648 intron 5-HT7 - chr3R 30991717 intron,3` UTR 5-HT7 -,CG31007 - chr3R_4_30990001 chr3R_30990001 RAL-853_125b 3824 chr3R 31042064 31042137 chr3R 31042201 31042274 31 137 3.5 8.0 5.8 4.6 210 chr3R 31042064 exon CanA1 + chr3R 31042169 intron CanA1 + chr3R 31042274 intron CanA1 + chr3R_31_31040001 chr3R_31040001 RAL-853_125b 3825 chr3R 31069598 31069668 chr3R 31069743 31069797 34 143 6.5 5.5 6.0 4.9 199 chr3R 31069598 intron Sox100B + chr3R 31069698 intron Sox100B + chr3R 31069797 intron Sox100B + chr3R_34_31065001 chr3R_31065001 RAL-853_125b 3826 chr3R 31074190 31074249 chr3R 31081838 31081897 springer 17 7648 10.5 10.5 10.5 1.5 7707 chr3R 31074190 intron Sox100B + chr3R 31078044 intron Sox100B + chr3R 31081897 exon Sox100B + chr3R_17_31075001 chr3R_31075001 RAL-853_125b 3827 chr3R 31102033 31102068 chr3R 31102147 31102193 18 126 0.0 6.5 3.2 4.3 160 chr3R 31102033 intergenic not near genes chr3R 31102113 intergenic not near genes chr3R 31102193 intergenic not near genes chr3R_18_31100001 chr3R_31100001 RAL-853_125b 3828 chr3R 31153912 31153989 chr3R 31154610 31154677 33 694 6.0 13.0 9.5 3.1 765 chr3R 31153912 intron Gycbeta100B + chr3R 31154294 intron Gycbeta100B + chr3R 31154677 exon Gycbeta100B + chr3R_33_31150001 chr3R_31150001 RAL-853_125b 3829 chr3R 31270917 31270929 chr3R 31271052 31271064 9 135 10.5 9.5 10.0 0.8 147 chr3R 31270917 intergenic not near genes chr3R 31270990 intergenic not near genes chr3R 31271064 intergenic not near genes chr3R_9_31270001 chr3R_31270001 RAL-853_125b 3830 chr3R 31279331 31279360 chr3R 31285572 31285601 diver 15 6239 17.0 11.0 14.0 1.0 6270 chr3R 31279331 intergenic not near genes chr3R 31282466 intergenic not near genes chr3R 31285601 intergenic not near genes chr3R_15_31280001 chr3R_31280001 RAL-853_125b 3831 chr3R 31279366 31279409 chr3R 31285562 31285650 diver 9 6234 8.5 9.5 9.0 0.9 6284 chr3R 31279366 intergenic not near genes chr3R 31282508 intergenic not near genes chr3R 31285650 intergenic not near genes chr3R_9_31280001 chr3R_31280001 RAL-853_125b 3832 chr3R 31330402 31330409 chr3R 31335644 31335661 copia 10 5250 18.5 6.5 12.5 0.7 5259 chr3R 31330402 intron CG34347 + chr3R 31333032 intron CG34347 + chr3R 31335661 intron CG34347 + chr3R_10_31330001 chr3R_31330001 RAL-853_125b 3833 chr3R 31413047 31413075 chr3R 31418297 31418325 copia 8 5248 15.0 0.5 7.8 0.9 5278 chr3R 31413047 intron Gprk2 + chr3R 31415686 intron Gprk2 + chr3R 31418325 intron Gprk2 + chr3R_8_31415001 chr3R_31415001 RAL-853_125b 3834 chr3R 31426839 31426900 chr3R 31426981 31427042 26 142 11.5 5.0 8.2 2.8 203 chr3R 31426839 intron Gprk2 + chr3R 31426940 intron Gprk2 + chr3R 31427042 intron Gprk2 + chr3R_26_31425001 chr3R_31425001 RAL-853_125b 3835 chr3R 31435314 31435386 chr3R 31435516 31435588 29 201 8.0 9.0 8.5 3.1 274 chr3R 31435314 intron Gprk2 + chr3R 31435451 intron Gprk2 + chr3R 31435588 intron Gprk2 + chr3R_29_31435001 chr3R_31435001 RAL-853_125b 3836 chr3R 31446035 31446082 chr3R 31446175 31446222 15 139 6.5 6.0 6.2 2.1 187 chr3R 31446035 intron Gprk2 + chr3R 31446128 intron Gprk2 + chr3R 31446222 intron Gprk2 + chr3R_15_31445001 chr3R_31445001 RAL-853_125b 3837 chr3R 31448558 31448572 chr3R 31448684 31448698 7 126 17.0 7.0 12.0 0.5 140 chr3R 31448558 intron Gprk2 + chr3R 31448628 intron Gprk2 + chr3R 31448698 intron Gprk2 + chr3R_7_31445001 chr3R_31445001 RAL-853_125b 3838 chr3R 31448576 31448621 chr3R 31448679 31448719 15 109 7.5 6.5 7.0 1.9 143 chr3R 31448576 intron Gprk2 + chr3R 31448648 intron Gprk2 + chr3R 31448719 intron Gprk2 + chr3R_15_31445001 chr3R_31445001 RAL-853_125b 3839 chr3R 31516933 31516996 chr3R 31517125 31517164 37 189 11.5 15.5 13.5 2.6 231 chr3R 31516933 intergenic not near genes chr3R 31517048 intergenic not near genes chr3R 31517164 intergenic not near genes chr3R_37_31515001 chr3R_31515001 RAL-853_125b 3840 chr3R 31530773 31530808 chr3R 31531150 31531183 8 370 16.0 10.0 13.0 0.6 410 chr3R 31530773 intergenic not near genes chr3R 31530978 intergenic not near genes chr3R 31531183 intergenic not near genes chr3R_8_31530001 chr3R_31530001 RAL-853_125b 3841 chr3R 31530812 31530843 chr3R 31531144 31531220 26 353 9.0 8.0 8.5 2.7 408 chr3R 31530812 intergenic not near genes chr3R 31531016 intergenic not near genes chr3R 31531220 intergenic not near genes chr3R_26_31530001 chr3R_31530001 RAL-853_125b 3842 chr3R 31538446 31538514 chr3R 31538574 31538642 33 127 8.5 12.0 10.2 2.9 196 chr3R 31538446 intergenic not near genes chr3R 31538544 intergenic not near genes chr3R 31538642 intergenic not near genes chr3R_33_31535001 chr3R_31535001 RAL-853_125b 3843 chr3R 31610074 31610137 chr3R 31610209 31610273 16 136 4.5 11.0 7.8 1.8 199 chr3R 31610074 intron CycG - chr3R 31610174 intron CycG - chr3R 31610273 intron CycG - chr3R_16_31610001 chr3R_31610001 RAL-853_125b 3844 chr3R 31691489 31691555 chr3R 31696305 31696366 Doc 34 4815 13.0 11.5 12.2 2.6 4877 chr3R 31691489 intergenic not near genes chr3R 31693928 intergenic not near genes chr3R 31696366 intergenic not near genes chr3R_34_31690001 chr3R_31690001 RAL-853_125b 3845 chr3R 31699687 31699723 chr3R 31699808 31699815 14 127 10.0 4.5 7.2 1.7 128 chr3R 31699687 intergenic not near genes chr3R 31699751 intergenic not near genes chr3R 31699815 intergenic not near genes chr3R_14_31695001 chr3R_31695001 RAL-853_125b 3846 chr3R 31699733 31699751 chr3R 31699800 31699843 13 114 6.0 4.0 5.0 2.2 110 chr3R 31699733 intergenic not near genes chr3R 31699788 intergenic not near genes chr3R 31699843 intergenic not near genes chr3R_13_31695001 chr3R_31695001 RAL-853_125b 3847 chr3R 31705034 31705058 chr3R 31705161 31705185 10 127 14.0 18.0 16.0 0.6 151 chr3R 31705034 3` UTR CR45052 - chr3R 31705110 3` UTR CR45052 - chr3R 31705185 3` UTR CR45052 - chr3R_10_31705001 chr3R_31705001 RAL-853_125b 3848 chr3R 31825045 31825085 chr3R 31830004 31830074 31 4960 45.5 56.0 50.8 0.6 5029 chr3R 31825045 intron RhoGAP100F + chr3R 31827560 intron RhoGAP100F + chr3R 31830074 intron RhoGAP100F + chr3R_31_31825001 chr3R_31825001 RAL-853_125b 3849 chr3R 31856944 31857016 chr3R 31857146 31857208 27 190 9.0 10.0 9.5 2.6 264 chr3R 31856944 intron heph - chr3R 31857076 intron heph - chr3R 31857208 intron heph - chr3R_27_31855001 chr3R_31855001 RAL-853_125b 3850 chr3R 31858704 31858778 chr3R 31858838 31858902 23 133 8.5 8.0 8.2 2.5 198 chr3R 31858704 intron heph - chr3R 31858803 intron heph - chr3R 31858902 intron heph - chr3R_23_31855001 chr3R_31855001 RAL-853_125b 3851 chr3R 31930860 31930932 chr3R 31931009 31931070 29 145 7.0 9.0 8.0 3.2 210 chr3R 31930860 intron heph - chr3R 31930965 intron heph - chr3R 31931070 intron heph - chr3R_29_31930001 chr3R_31930001 RAL-853_125b 3852 chr3R 31953159 31953173 chr3R 31953294 31953308 8 135 5.5 5.0 5.2 1.3 149 chr3R 31953159 intron heph - chr3R 31953234 intron heph - chr3R 31953308 intron heph - chr3R_8_31950001 chr3R_31950001 RAL-853_125b 3853 chr3R 31961293 31961308 chr3R 31961426 31961441 7 131 26.5 6.0 16.2 0.4 148 chr3R 31961293 intron heph - chr3R 31961367 intron heph - chr3R 31961441 intron heph - chr3R_7_31960001 chr3R_31960001 RAL-853_125b 3854 chr3R 31961312 31961362 chr3R 31961420 31961495 33 125 9.0 6.0 7.5 3.9 183 chr3R 31961312 intron heph - chr3R 31961404 intron heph - chr3R 31961495 intron heph - chr3R_33_31960001 chr3R_31960001 RAL-853_125b 3855 chr3R 31962046 31962053 chr3R 31962387 31962404 6 351 14.5 0.0 7.2 0.7 358 chr3R 31962046 intron heph - chr3R 31962225 intron heph - chr3R 31962404 intron heph - chr3R_6_31960001 chr3R_31960001 RAL-853_125b 3856 chr3R 31962055 31962078 chr3R 31962386 31962434 8 353 11.5 0.0 5.8 1.2 379 chr3R 31962055 intron heph - chr3R 31962244 intron heph - chr3R 31962434 intron heph - chr3R_8_31960001 chr3R_31960001 RAL-853_125b 3857 chr3R 31976539 31976571 chr3R 31976870 31976902 11 331 0.0 9.5 4.8 1.9 363 chr3R 31976539 intron heph - chr3R 31976720 intron heph - chr3R 31976902 intron heph - chr3R_11_31975001 chr3R_31975001 RAL-853_125b 3858 chr3R 31997949 31998016 chr3R 32005469 32005536 blood 33 7519 5.5 5.5 5.5 5.1 7587 chr3R 31997949 intron heph - chr3R 32001742 intron heph - chr3R 32005536 intron heph - chr3R_33_32000001 chr3R_32000001 RAL-853_125b 3859 chr3R 32043365 32043413 chr3R 32043494 32043542 9 133 79.5 82.5 81.0 0.1 177 chr3R 32043365 intergenic not near genes chr3R 32043454 intergenic not near genes chr3R 32043542 intergenic not near genes chr3R_9_32040001 chr3R_32040001 RAL-853_125b 3860 chr3R 32043359 32043428 chr3R 32043545 32043567 10 139 85.5 66.0 75.8 0.1 208 chr3R 32043359 intergenic not near genes chr3R 32043463 intergenic not near genes chr3R 32043567 intergenic not near genes chr3R_10_32040001 chr3R_32040001 RAL-853_125b 3861 chr4 76454 76501 chr4 81947 81994 I-element 18 5493 10.5 3.5 7.0 2.2 5540 chr4 76454 intron pan + chr4 79224 intron pan + chr4 81994 intron pan + chr4_18_75001 chr4_75001 RAL-853_125b 3862 chr4 264931 264998 chr4 265184 265251 16 253 4.5 3.5 4.0 3.2 320 chr4 264931 exon RhoGAP102A + chr4 265091 3` UTR RhoGAP102A + chr4 265251 3` UTR RhoGAP102A + chr4_16_265001 chr4_265001 RAL-853_125b 3863 chr4 319951 320009 chr4 328177 328215 Stalker2 13 8224 4.0 5.5 4.8 2.2 8264 chr4 319951 3` UTR CG32850 + chr4 324083 intron CG32850 + chr4 328215 3` UTR,3` UTR CG32850 +,PMCA - chr4_13_320001 chr4_320001 RAL-853_125b 3864 chr4 336211 336277 chr4 336428 336494 20 216 6.5 6.5 6.5 2.7 283 chr4 336211 intron PMCA - chr4 336352 intron PMCA - chr4 336494 intron PMCA - chr4_20_335001 chr4_335001 RAL-853_125b 3865 chr4 409176 409221 chr4 409309 409354 12 133 8.0 0.0 4.0 2.4 178 chr4 409176 intergenic not near genes chr4 409265 intergenic not near genes chr4 409354 intergenic not near genes chr4_12_405001 chr4_405001 RAL-853_125b 3866 chr4 498152 498174 chr4 498298 498320 INE-1 11 146 13.0 9.0 11.0 0.9 168 chr4 498152 intergenic not near genes chr4 498236 intergenic not near genes chr4 498320 intergenic not near genes chr4_11_495001 chr4_495001 RAL-853_125b 3867 chr4 662136 662206 chr4 662831 662901 INE-1 27 694 6.5 7.0 6.8 3.5 765 chr4 662136 intron gw - chr4 662518 intron gw - chr4 662901 5` UTR gw - chr4_27_660001 chr4_660001 RAL-853_125b 3868 chr4 671565 671622 chr4 680198 680254 Tirant 34 8631 13.0 11.5 12.2 2.6 8689 chr4 671565 intron CG11360 + chr4 675910 intron CG11360 + chr4 680254 intron CG11360 + chr4_34_675001 chr4_675001 RAL-853_125b 3869 chr4 852858 852922 chr4 853272 853336 21 412 8.0 10.5 9.2 2.1 478 chr4 852858 intergenic not near genes chr4 853097 intergenic not near genes chr4 853336 intergenic CG11148 - chr4_21_850001 chr4_850001 RAL-853_125b 3870 chrX 295809 295877 chrX 303479 303500 412 20 7668 5.0 7.5 6.2 2.8 7691 chrX 295809 intron CG3777 + chrX 299654 intron CG3777 + chrX 303500 intron CG3777 + chrX_20_295001 chrX_295001 RAL-853_125b 3871 chrX 318431 318491 chrX 323567 323627 flea 20 5136 6.0 7.0 6.5 2.7 5196 chrX 318431 intron,intron CG3777 +,CG32816 - chrX 321029 intron,intron CG3777 +,CG32816 - chrX 323627 intron,intron CG3777 +,CG32816 - chrX_20_320001 chrX_320001 RAL-853_125b 3872 chrX 325585 325639 chrX 325718 325774 19 134 2.5 10.0 6.2 2.6 189 chrX 325585 intron,intron CG3777 +,CG32816 - chrX 325680 intron,intron CG3777 +,CG32816 - chrX 325774 intron,intron CG3777 +,CG32816 - chrX_19_325001 chrX_325001 RAL-853_125b 3873 chrX 428382 428445 chrX 434617 434680 3S18 23 6235 6.0 8.0 7.0 2.9 6298 chrX 428382 intron CG32816 - chrX 431531 intron CG32816 - chrX 434680 intron CG32816 - chrX_23_430001 chrX_430001 RAL-853_125b 3874 chrX 440952 441019 chrX 441080 441147 28 128 7.0 9.5 8.2 3.0 195 chrX 440952 intron CG32816 - chrX 441050 intron CG32816 - chrX 441147 intron CG32816 - chrX_28_440001 chrX_440001 RAL-853_125b 3875 chrX 450315 450392 chrX 450443 450520 22 128 6.5 8.0 7.2 2.7 205 chrX 450315 intron CG32816 - chrX 450418 intron CG32816 - chrX 450520 intron CG32816 - chrX_22_450001 chrX_450001 RAL-853_125b 3876 chrX 494572 494589 chrX 494708 494716 9 140 10.5 10.5 10.5 0.8 144 chrX 494572 intergenic CG17778 + chrX 494644 5` UTR CG17778 + chrX 494716 5` UTR CG17778 + chrX_9_490001 chrX_490001 RAL-853_125b 3877 chrX 494591 494625 chrX 494691 494767 16 139 7.0 9.0 8.0 1.8 176 chrX 494591 intergenic CG17778 + chrX 494679 5` UTR CG17778 + chrX 494767 intron CG17778 + chrX_16_490001 chrX_490001 RAL-853_125b 3878 chrX 547590 547660 chrX 547884 547954 26 291 9.0 10.0 9.5 2.5 364 chrX 547590 intron Appl + chrX 547772 intron Appl + chrX 547954 intron Appl + chrX_26_545001 chrX_545001 RAL-853_125b 3879 chrX 551382 551453 chrX 558994 559060 412 14 7609 6.5 4.5 5.5 2.2 7678 chrX 551382 intron Appl + chrX 555221 intron Appl + chrX 559060 intron Appl + chrX_14_555001 chrX_555001 RAL-853_125b 3880 chrX 561553 561605 chrX 561674 561743 4 138 7.5 5.5 6.5 0.5 190 chrX 561553 intron Appl + chrX 561648 intron Appl + chrX 561743 intron Appl + chrX_4_560001 chrX_560001 RAL-853_125b 3881 chrX 667603 667674 chrX 667737 667808 20 134 7.5 0.0 3.8 4.2 205 chrX 667603 intergenic not near genes chrX 667706 intergenic not near genes chrX 667808 intergenic not near genes chrX_20_665001 chrX_665001 RAL-853_125b 3882 chrX 670202 670291 chrX 670344 670419 17 132 0.0 3.0 1.5 6.8 217 chrX 670202 intergenic not near genes chrX 670310 intergenic not near genes chrX 670419 intergenic not near genes chrX_17_670001 chrX_670001 RAL-853_125b 3883 chrX 680794 680867 chrX 680927 680978 29 128 8.5 4.5 6.5 3.9 184 chrX 680794 intergenic not near genes chrX 680886 intergenic not near genes chrX 680978 intergenic not near genes chrX_29_680001 chrX_680001 RAL-853_125b 3884 chrX 706738 706819 chrX 707160 707187 20 417 0.0 9.0 4.5 3.6 449 chrX 706738 intron sdk + chrX 706962 intron sdk + chrX 707187 intron sdk + chrX_20_705001 chrX_705001 RAL-853_125b 3885 chrX 736896 736930 chrX 737027 737061 15 131 8.5 7.5 8.0 1.7 165 chrX 736896 intron sdk + chrX 736978 intron sdk + chrX 737061 intron sdk + chrX_15_735001 chrX_735001 RAL-853_125b 3886 chrX 778083 778159 chrX 778223 778289 19 138 5.0 0.0 2.5 5.4 206 chrX 778083 intron fz3 + chrX 778186 intron fz3 + chrX 778289 intron fz3 + chrX_19_775001 chrX_775001 RAL-853_125b 3887 chrX 802245 802311 chrX 802372 802413 29 121 8.0 9.0 8.5 3.1 168 chrX 802245 exon CG13359 - chrX 802329 exon CG13359 - chrX 802413 exon CG13359 - chrX_29_800001 chrX_800001 RAL-853_125b 3888 chrX 812227 812246 chrX 817908 817927 297 6 5681 15.0 8.5 11.8 0.5 5700 chrX 812227 intron CG43867 - chrX 815077 intron CG43867 - chrX 817927 intron CG43867 - chrX_6_815001 chrX_815001 RAL-853_125b 3889 chrX 812256 812290 chrX 817902 817971 297 7 5674 9.0 6.0 7.5 0.8 5715 chrX 812256 intron CG43867 - chrX 815114 intron CG43867 - chrX 817971 intron CG43867 - chrX_7_815001 chrX_815001 RAL-853_125b 3890 chrX 827560 827628 chrX 835402 835470 roo 23 7840 7.5 8.0 7.8 2.6 7910 chrX 827560 intron CG43867 - chrX 831515 intron CG43867 - chrX 835470 intron CG43867 - chrX_23_830001 chrX_830001 RAL-853_125b 3891 chrX 881604 881671 chrX 881747 881814 26 141 7.0 15.0 11.0 2.2 210 chrX 881604 intron CG43867 - chrX 881709 intron CG43867 - chrX 881814 intron CG43867 - chrX_26_880001 chrX_880001 RAL-853_125b 3892 chrX 906652 906720 chrX 908491 908559 S-element 26 1837 5.5 8.5 7.0 3.2 1907 chrX 906652 intron CG43867 - chrX 907606 intron CG43867 - chrX 908559 intron CG43867 - chrX_26_905001 chrX_905001 RAL-853_125b 3893 chrX 911985 912044 chrX 912125 912179 18 139 5.5 8.0 6.8 2.3 194 chrX 911985 intron CG43867 - chrX 912082 intron CG43867 - chrX 912179 intron CG43867 - chrX_18_910001 chrX_910001 RAL-853_125b 3894 chrX 1024400 1024463 chrX 1024532 1024595 26 132 5.5 8.5 7.0 3.2 195 chrX 1024400 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX 1024498 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX 1024595 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX_26_1020001 chrX_1020001 RAL-853_125b 3895 chrX 1033310 1033322 chrX 1040993 1041005 412 5 7683 20.5 6.0 13.2 0.4 7695 chrX 1033310 intron su(w[a]) + chrX 1037158 intron su(w[a]) + chrX 1041005 intron su(w[a]) + chrX_5_1035001 chrX_1035001 RAL-853_125b 3896 chrX 1063718 1063733 chrX 1072561 1072576 roo 4 8843 13.0 9.0 11.0 0.3 8858 chrX 1063718 intron CR44779 + chrX 1068147 intron CR44779 + chrX 1072576 intron CR44779 + chrX_4_1065001 chrX_1065001 RAL-853_125b 3897 chrX 1153145 1153210 chrX 1153272 1153343 30 129 8.0 8.5 8.2 3.3 198 chrX 1153145 intergenic not near genes chrX 1153244 intergenic not near genes chrX 1153343 intergenic not near genes chrX_30_1150001 chrX_1150001 RAL-853_125b 3898 chrX 1163274 1163324 chrX 1163375 1163449 29 122 9.0 1.0 5.0 4.8 175 chrX 1163274 intergenic CG34320 - chrX 1163362 intergenic CG34320 - chrX 1163449 intergenic CG34320 - chrX_29_1160001 chrX_1160001 RAL-853_125b 3899 chrX 1179944 1179970 chrX 1180076 1180102 10 130 8.0 16.5 12.2 0.8 158 chrX 1179944 intergenic CG11379 + chrX 1180023 intergenic CG11379 + chrX 1180102 intergenic CG11379 + chrX_10_1180001 chrX_1180001 RAL-853_125b 3900 chrX 1185521 1185585 chrX 1185650 1185714 18 129 7.5 7.0 7.2 2.2 193 chrX 1185521 intron CG14626 + chrX 1185618 intron CG14626 + chrX 1185714 intron CG14626 + chrX_18_1185001 chrX_1185001 RAL-853_125b 3901 chrX 1253687 1253760 chrX 1253819 1253892 28 130 7.0 7.5 7.2 3.4 205 chrX 1253687 intron Atf3 - chrX 1253790 intron Atf3 - chrX 1253892 intron Atf3 - chrX_28_1250001 chrX_1250001 RAL-853_125b 3902 chrX 1357734 1357795 chrX 1367954 1368015 Doc 24 10220 8.0 11.0 9.5 2.3 10281 chrX 1357734 intergenic png - chrX 1362874 intergenic not near genes chrX 1368015 intergenic not near genes chrX_24_1360001 chrX_1360001 RAL-853_125b 3903 chrX 1515180 1515256 chrX 1515307 1515383 26 125 12.0 7.5 9.8 2.4 203 chrX 1515180 intron inc + chrX 1515282 intron inc + chrX 1515383 exon inc + chrX_26_1515001 chrX_1515001 RAL-853_125b 3904 chrX 1627264 1627303 chrX 1627391 1627429 12 118 6.5 12.0 9.2 1.2 165 chrX 1627264 intron,intron Mur2B -,br + chrX 1627346 intron,intron Mur2B -,br + chrX 1627429 intron,intron Mur2B -,br + chrX_12_1625001 chrX_1625001 RAL-853_125b 3905 chrX 1712242 1712270 chrX 1712341 1712353 7 115 10.5 10.5 10.5 0.6 111 chrX 1712242 intergenic not near genes chrX 1712298 intergenic not near genes chrX 1712353 intergenic not near genes chrX_7_1710001 chrX_1710001 RAL-853_125b 3906 chrX 1806357 1806411 chrX 1806484 1806527 19 125 19.0 11.0 15.0 1.2 170 chrX 1806357 intron CG42666 + chrX 1806442 intron CG42666 + chrX 1806527 intron CG42666 + chrX_19_1805001 chrX_1805001 RAL-853_125b 3907 chrX 1894163 1894228 chrX 1894303 1894368 25 140 5.0 7.5 6.2 3.5 205 chrX 1894163 intron arm - chrX 1894266 intron arm - chrX 1894368 intron arm - chrX_25_1890001 chrX_1890001 RAL-853_125b 3908 chrX 1930493 1930557 chrX 1938114 1938178 opus 21 7621 4.0 5.5 4.8 3.6 7685 chrX 1930493 3` UTR CG11596 + chrX 1934336 intergenic not near genes chrX 1938178 3` UTR CG3857 - chrX_21_1930001 chrX_1930001 RAL-853_125b 3909 chrX 1954847 1954915 chrX 1962832 1962905 Stalker2 18 7979 4.5 7.5 6.0 2.6 8058 chrX 1954847 intron Hr4 + chrX 1958876 intron Hr4 + chrX 1962905 intron Hr4 + chrX_18_1955001 chrX_1955001 RAL-853_125b 3910 chrX 1982748 1982822 chrX 1982903 1982961 29 152 5.0 7.5 6.2 4.0 213 chrX 1982748 intron Hr4 + chrX 1982854 intron Hr4 + chrX 1982961 intron Hr4 + chrX_29_1980001 chrX_1980001 RAL-853_125b 3911 chrX 2095889 2095908 chrX 2096015 2096034 11 126 12.0 0.0 6.0 1.6 145 chrX 2095889 intron csw + chrX 2095962 intron csw + chrX 2096034 intron csw + chrX_11_2095001 chrX_2095001 RAL-853_125b 3912 chrX 2095910 2095920 chrX 2096012 2096036 4 118 9.5 0.0 4.8 0.7 126 chrX 2095910 intron csw + chrX 2095973 intron csw + chrX 2096036 intron csw + chrX_4_2095001 chrX_2095001 RAL-853_125b 3913 chrX 2146617 2146680 chrX 2146759 2146807 18 140 8.5 10.5 9.5 1.7 190 chrX 2146617 intron Pgd + chrX 2146712 intron Pgd + chrX 2146807 intron Pgd + chrX_18_2145001 chrX_2145001 RAL-853_125b 3914 chrX 2308802 2308814 chrX 2317426 2317447 Tirant 5 8631 8.5 12.5 10.5 0.4 8645 chrX 2308802 intron phl + chrX 2313124 intron phl + chrX 2317447 intron phl + chrX_5_2310001 chrX_2310001 RAL-853_125b 3915 chrX 2399801 2399854 chrX 2408204 2408257 roo 16 8395 15.0 11.5 13.2 1.1 8456 chrX 2399801 intergenic not near genes chrX 2404029 intergenic not near genes chrX 2408257 intergenic not near genes chrX_16_2400001 chrX_2400001 RAL-853_125b 3916 chrX 2506465 2506532 chrX 2506596 2506666 15 132 0.0 4.5 2.2 4.7 201 chrX 2506465 intron trol - chrX 2506566 intron trol - chrX 2506666 intron trol - chrX_15_2505001 chrX_2505001 RAL-853_125b 3917 chrX 2539207 2539272 chrX 2539478 2539543 16 271 5.5 7.0 6.2 2.2 336 chrX 2539207 intron trol - chrX 2539375 intron trol - chrX 2539543 intron trol - chrX_16_2535001 chrX_2535001 RAL-853_125b 3918 chrX 2559322 2559382 chrX 2559460 2559516 30 136 7.0 8.0 7.5 3.5 194 chrX 2559322 intron Pdfr + chrX 2559419 intron Pdfr + chrX 2559516 intron Pdfr + chrX_30_2555001 chrX_2555001 RAL-853_125b 3919 chrX 2578769 2578776 chrX 2578911 2578917 5 142 3.0 11.0 7.0 0.6 148 chrX 2578769 intergenic Pdfr +,Vha36-3 - chrX 2578843 intergenic Pdfr +,Vha36-3 - chrX 2578917 intergenic Vha36-3 -,Pdfr + chrX_5_2575001 chrX_2575001 RAL-853_125b 3920 chrX 2578785 2578841 chrX 2578906 2578982 26 141 3.0 8.0 5.5 4.0 197 chrX 2578785 intergenic Pdfr +,Vha36-3 - chrX 2578884 intergenic Vha36-3 -,Pdfr + chrX 2578982 intergenic Vha36-3 -,Pdfr + chrX_26_2575001 chrX_2575001 RAL-853_125b 3921 chrX 2610342 2610411 chrX 2617509 2617553 HMS-Beagle 7 7152 6.5 1.0 3.8 1.5 7211 chrX 2610342 intergenic CG8636 - chrX 2613948 intergenic not near genes chrX 2617553 intergenic Tsp3A - chrX_7_2610001 chrX_2610001 RAL-853_125b 3922 chrX 2635330 2635401 chrX 2635483 2635560 39 156 5.0 12.0 8.5 4.1 230 chrX 2635330 intron sgg + chrX 2635445 intron sgg + chrX 2635560 intron sgg + chrX_39_2635001 chrX_2635001 RAL-853_125b 3923 chrX 2664396 2664402 chrX 2665598 2665604 1360 6 1202 2.0 5.5 3.8 1.2 1208 chrX 2664396 intron sgg + chrX 2665000 intron sgg + chrX 2665604 intron sgg + chrX_6_2665001 chrX_2665001 RAL-853_125b 3924 chrX 2823769 2823773 chrX 2832345 2832371 roo 5 8593 14.0 12.5 13.2 0.4 8602 chrX 2823769 intron kirre + chrX 2828070 intron kirre + chrX 2832371 intron kirre + chrX_5_2825001 chrX_2825001 RAL-853_125b 3925 chrX 2844858 2844866 chrX 2852318 2852326 mdg1 6 7460 14.0 6.5 10.2 0.5 7468 chrX 2844858 intron kirre + chrX 2848592 intron kirre + chrX 2852326 intron kirre + chrX_6_2845001 chrX_2845001 RAL-853_125b 3926 chrX 2844871 2844920 chrX 2852331 2852380 mdg1 21 7460 7.5 7.0 7.2 2.6 7509 chrX 2844871 intron kirre + chrX 2848626 intron kirre + chrX 2852380 intron kirre + chrX_21_2845001 chrX_2845001 RAL-853_125b 3927 chrX 2888070 2888141 chrX 2888198 2888264 31 127 8.0 9.0 8.5 3.3 194 chrX 2888070 intron kirre + chrX 2888167 intron kirre + chrX 2888264 intron kirre + chrX_31_2885001 chrX_2885001 RAL-853_125b 3928 chrX 3057980 3058039 chrX 3058271 3058330 pogo 12 291 5.5 4.0 4.8 2.1 350 chrX 3057980 intron kirre + chrX 3058155 intron kirre + chrX 3058330 intron kirre + chrX_12_3055001 chrX_3055001 RAL-853_125b 3929 chrX 3067889 3067958 chrX 3068028 3068097 36 139 6.5 0.0 3.2 8.6 208 chrX 3067889 intron kirre + chrX 3067993 intron kirre + chrX 3068097 intron kirre + chrX_36_3065001 chrX_3065001 RAL-853_125b 3930 chrX 3075586 3075659 chrX 3080943 3081015 Transpac 13 5357 7.5 8.0 7.8 1.5 5429 chrX 3075586 intron kirre + chrX 3078300 intron kirre + chrX 3081015 intron kirre + chrX_13_3075001 chrX_3075001 RAL-853_125b 3931 chrX 3120613 3120634 chrX 3120738 3120751 9 125 5.5 8.0 6.8 1.2 138 chrX 3120613 intron kirre + chrX 3120682 intron kirre + chrX 3120751 intron kirre + chrX_9_3120001 chrX_3120001 RAL-853_125b 3932 chrX 3178182 3178253 chrX 3178315 3178386 12 132 3.0 4.0 3.5 2.7 204 chrX 3178182 intron dnc + chrX 3178284 intron dnc + chrX 3178386 intron dnc + chrX_12_3175001 chrX_3175001 RAL-853_125b 3933 chrX 3206437 3206493 chrX 3206566 3206622 6 128 3.0 7.0 5.0 1.0 185 chrX 3206437 intron dnc + chrX 3206530 intron dnc + chrX 3206622 intron dnc + chrX_6_3205001 chrX_3205001 RAL-853_125b 3934 chrX 3218497 3218515 chrX 3227696 3227714 roo 5 9199 0.0 8.0 4.0 1.0 9217 chrX 3218497 intron dnc + chrX 3223106 intron dnc + chrX 3227714 intron dnc + chrX_5_3220001 chrX_3220001 RAL-853_125b 3935 chrX 3243615 3243641 chrX 3243755 3243781 9 140 6.5 12.0 9.2 0.9 166 chrX 3243615 intron dnc + chrX 3243698 intron dnc + chrX 3243781 intron dnc + chrX_9_3240001 chrX_3240001 RAL-853_125b 3936 chrX 3306301 3306373 chrX 3306433 3306505 10 132 4.0 0.0 2.0 3.3 204 chrX 3306301 intron dnc + chrX 3306403 intron dnc + chrX 3306505 intron dnc + chrX_10_3305001 chrX_3305001 RAL-853_125b 3937 chrX 3351755 3351798 chrX 3351891 3351919 10 122 12.0 10.0 11.0 0.8 164 chrX 3351755 intergenic not near genes chrX 3351837 intergenic not near genes chrX 3351919 intergenic not near genes chrX_10_3350001 chrX_3350001 RAL-853_125b 3938 chrX 3351799 3351809 chrX 3351890 3351945 4 105 10.5 10.0 10.2 0.4 146 chrX 3351799 intergenic not near genes chrX 3351872 intergenic not near genes chrX 3351945 intergenic not near genes chrX_4_3350001 chrX_3350001 RAL-853_125b 3939 chrX 3352715 3352747 chrX 3352854 3352886 9 139 7.5 2.5 5.0 1.5 171 chrX 3352715 intergenic not near genes chrX 3352800 intergenic not near genes chrX 3352886 intergenic not near genes chrX_9_3350001 chrX_3350001 RAL-853_125b 3940 chrX 3398101 3398104 chrX 3398232 3398235 4 131 16.0 10.0 13.0 0.3 134 chrX 3398101 intron,intron CR44999 +,CG12535 - chrX 3398168 intron,intron CR44999 +,CG12535 - chrX 3398235 intron,intron CR44999 +,CG12535 - chrX_4_3395001 chrX_3395001 RAL-853_125b 3941 chrX 3398106 3398374 chrX 3398227 3398502 37 129 10.5 9.0 9.8 3.4 396 chrX 3398106 intron,intron CR44999 +,CG12535 - chrX 3398304 intron,intron CR44999 +,CG12535 - chrX 3398502 intron,intron CR44999 +,CG12535 - chrX_37_3395001 chrX_3395001 RAL-853_125b 3942 chrX 3408934 3409014 chrX 3409061 3409141 19 126 4.0 7.0 5.5 2.9 207 chrX 3408934 intron,intron CR44999 +,CG12535 - chrX 3409038 intron,intron CR44999 +,CG12535 - chrX 3409141 intron,intron CR44999 +,CG12535 - chrX_19_3405001 chrX_3405001 RAL-853_125b 3943 chrX 3414293 3414351 chrX 3414470 3414528 8 177 5.5 0.5 3.0 2.0 235 chrX 3414293 intron,intron CR44999 +,CG12535 - chrX 3414410 intron,intron CR44999 +,CG12535 - chrX 3414528 intron,intron CR44999 +,CG12535 - chrX_8_3410001 chrX_3410001 RAL-853_125b 3944 chrX 3414978 3415037 chrX 3421213 3421272 3S18 17 6234 7.0 4.5 5.8 2.5 6294 chrX 3414978 intron,intron CR44999 +,CG12535 - chrX 3418125 intron,intron CR44999 +,CG12535 - chrX 3421272 intron,intron CR44999 +,CG12535 - chrX_17_3415001 chrX_3415001 RAL-853_125b 3945 chrX 3493056 3493108 chrX 3502259 3502317 roo 12 9208 4.0 1.5 2.8 3.2 9261 chrX 3493056 intron,intron CR44999 +,Gas8 - chrX 3497686 intron,intron CR44999 +,Gas8 - chrX 3502317 intron,intron CR44999 +,Gas8 - chrX_12_3495001 chrX_3495001 RAL-853_125b 3946 chrX 3589482 3589510 chrX 3589620 3589648 8 138 0.0 12.0 6.0 1.1 166 chrX 3589482 intron AstA-R1 + chrX 3589565 intron AstA-R1 + chrX 3589648 intron AstA-R1 + chrX_8_3585001 chrX_3585001 RAL-853_125b 3947 chrX 3597510 3597576 chrX 3619728 3619794 roo 17 22215 9.5 10.0 9.8 1.6 22284 chrX 3597510 intron AstA-R1 + chrX 3608652 intron AstA-R1 + chrX 3619794 intron AstA-R1 + chrX_17_3605001 chrX_3605001 RAL-853_125b 3948 chrX 3621780 3621786 chrX 3621945 3621959 4 171 0.5 11.0 5.8 0.6 179 chrX 3621780 intron AstA-R1 + chrX 3621870 intron AstA-R1 + chrX 3621959 intron AstA-R1 + chrX_4_3620001 chrX_3620001 RAL-853_125b 3949 chrX 3640288 3640313 chrX 3640443 3640468 8 155 4.0 6.5 5.2 1.3 180 chrX 3640288 intron AstA-R1 + chrX 3640378 intron AstA-R1 + chrX 3640468 intron AstA-R1 + chrX_8_3640001 chrX_3640001 RAL-853_125b 3950 chrX 3726728 3726784 chrX 3730175 3730230 NOF 19 3445 4.0 9.0 6.5 2.5 3502 chrX 3726728 intron tlk + chrX 3728479 intron tlk + chrX 3730230 intron tlk + chrX_19_3725001 chrX_3725001 RAL-853_125b 3951 chrX 3842303 3842353 chrX 3842571 3842621 pogo 15 268 7.0 3.0 5.0 2.5 318 chrX 3842303 intron ec + chrX 3842462 intron ec + chrX 3842621 intron ec + chrX_15_3840001 chrX_3840001 RAL-853_125b 3952 chrX 3866054 3866096 chrX 3866182 3866224 19 128 11.0 8.0 9.5 1.8 170 chrX 3866054 intron yin - chrX 3866139 intron yin - chrX 3866224 intron yin - chrX_19_3865001 chrX_3865001 RAL-853_125b 3953 chrX 3888458 3888496 chrX 3888586 3888624 14 127 0.0 7.5 3.8 2.9 166 chrX 3888458 intron CG15239 + chrX 3888541 intron CG15239 + chrX 3888624 intron CG15239 + chrX_14_3885001 chrX_3885001 RAL-853_125b 3954 chrX 3922083 3922141 chrX 3922404 3922466 11 323 4.0 10.0 7.0 1.4 383 chrX 3922083 intron CG42541 - chrX 3922274 intron CG42541 - chrX 3922466 intron CG42541 - chrX_11_3920001 chrX_3920001 RAL-853_125b 3955 chrX 3922144 3922154 chrX 3922399 3922467 4 299 2.0 9.5 5.8 0.6 323 chrX 3922144 intron CG42541 - chrX 3922306 intron CG42541 - chrX 3922467 intron CG42541 - chrX_4_3920001 chrX_3920001 RAL-853_125b 3956 chrX 3986834 3986886 chrX 3994510 3994569 412 19 7681 9.0 8.5 8.8 1.9 7735 chrX 3986834 intergenic not near genes chrX 3990702 intergenic not near genes chrX 3994569 intergenic not near genes chrX_19_3990001 chrX_3990001 RAL-853_125b 3957 chrX 4048452 4048521 chrX 4048578 4048647 29 126 8.0 5.5 6.8 3.7 195 chrX 4048452 3` UTR CR45482 - chrX 4048550 3` UTR CR45482 - chrX 4048647 3` UTR CR45482 - chrX_29_4045001 chrX_4045001 RAL-853_125b 3958 chrX 4115167 4115232 chrX 4115291 4115358 17 128 9.0 10.0 9.5 1.6 191 chrX 4115167 exon Tip60 - chrX 4115262 intron Tip60 - chrX 4115358 exon Tip60 - chrX_17_4115001 chrX_4115001 RAL-853_125b 3959 chrX 4132627 4132695 chrX 4132845 4132913 16 217 6.0 8.0 7.0 2.0 286 chrX 4132627 3` UTR GlcAT-I + chrX 4132770 3` UTR GlcAT-I + chrX 4132913 3` UTR Fas2 - chrX_16_4130001 chrX_4130001 RAL-853_125b 3960 chrX 4152344 4152368 chrX 4152471 4152475 4 122 9.5 19.5 14.5 0.3 131 chrX 4152344 intron Fas2 - chrX 4152410 intron Fas2 - chrX 4152475 intron Fas2 - chrX_4_4150001 chrX_4150001 RAL-853_125b 3961 chrX 4155002 4155057 chrX 4155198 4155253 13 195 4.0 5.0 4.5 2.4 251 chrX 4155002 intron Fas2 - chrX 4155128 intron Fas2 - chrX 4155253 intron Fas2 - chrX_13_4155001 chrX_4155001 RAL-853_125b 3962 chrX 4157847 4157921 chrX 4164950 4165023 297 26 7101 4.5 4.0 4.2 5.0 7176 chrX 4157847 intron Fas2 - chrX 4161435 intron Fas2 - chrX 4165023 intron Fas2 - chrX_26_4160001 chrX_4160001 RAL-853_125b 3963 chrX 4209889 4209919 chrX 4210029 4210059 9 140 0.0 5.0 2.5 2.6 170 chrX 4209889 intergenic not near genes chrX 4209974 intergenic not near genes chrX 4210059 intergenic not near genes chrX_9_4205001 chrX_4205001 RAL-853_125b 3964 chrX 4216292 4216336 chrX 4216421 4216465 11 128 11.0 11.5 11.2 0.9 173 chrX 4216292 intergenic not near genes chrX 4216378 intergenic CG15571 - chrX 4216465 intergenic CG15571 - chrX_11_4215001 chrX_4215001 RAL-853_125b 3965 chrX 4388261 4388274 chrX 4388444 4388457 5 181 9.0 11.0 10.0 0.5 196 chrX 4388261 intron CR32773 - chrX 4388359 intron CR32773 - chrX 4388457 intron CR32773 - chrX_5_4385001 chrX_4385001 RAL-853_125b 3966 chrX 4396928 4396934 chrX 4397063 4397069 4 135 17.0 7.5 12.2 0.3 141 chrX 4396928 intron CR32773 - chrX 4396998 intron CR32773 - chrX 4397069 intron CR32773 - chrX_4_4395001 chrX_4395001 RAL-853_125b 3967 chrX 4396936 4397001 chrX 4397061 4397126 23 133 5.5 7.5 6.5 3.1 190 chrX 4396936 intron CR32773 - chrX 4397031 intron CR32773 - chrX 4397126 intron CR32773 - chrX_23_4395001 chrX_4395001 RAL-853_125b 3968 chrX 4436464 4436489 chrX 4436596 4436622 15 131 4.0 10.0 7.0 1.9 158 chrX 4436464 intron,intron CR32773 -,bi + chrX 4436543 intron,intron CR32773 -,bi + chrX 4436622 intron,intron CR32773 -,bi + chrX_15_4435001 chrX_4435001 RAL-853_125b 3969 chrX 4468816 4468843 chrX 4468964 4468987 8 147 13.5 5.0 9.2 0.8 171 chrX 4468816 intron,intron CR32773 -,bi + chrX 4468902 intron,intron CR32773 -,bi + chrX 4468987 intron,intron CR32773 -,bi + chrX_8_4465001 chrX_4465001 RAL-853_125b 3970 chrX 4508878 4508942 chrX 4509056 4509120 21 177 8.5 9.5 9.0 2.1 242 chrX 4508878 intron CR32773 - chrX 4508999 intron CR32773 - chrX 4509120 intron CR32773 - chrX_21_4505001 chrX_4505001 RAL-853_125b 3971 chrX 4660776 4660842 chrX 4660925 4660991 21 149 10.0 6.0 8.0 2.3 215 chrX 4660776 intron CG3009 - chrX 4660884 intron CG3009 - chrX 4660991 intron CG3009 - chrX_21_4660001 chrX_4660001 RAL-853_125b 3972 chrX 4700355 4700417 chrX 4700748 4700810 jockey 29 393 4.0 8.0 6.0 4.1 455 chrX 4700355 3` UTR ctp + chrX 4700582 3` UTR ctp + chrX 4700810 3` UTR ctp + chrX_29_4700001 chrX_4700001 RAL-853_125b 3973 chrX 4723524 4723580 chrX 4723654 4723703 21 127 9.0 6.5 7.8 2.4 179 chrX 4723524 exon Proc-R + chrX 4723614 intron Proc-R + chrX 4723703 intron Proc-R + chrX_21_4720001 chrX_4720001 RAL-853_125b 3974 chrX 4731774 4731784 chrX 4736917 4736919 jockey 4 5141 14.0 13.0 13.5 0.3 5145 chrX 4731774 intergenic not near genes chrX 4734346 intergenic not near genes chrX 4736919 intergenic not near genes chrX_4_4730001 chrX_4730001 RAL-853_125b 3975 chrX 4763207 4763274 chrX 4763745 4763811 Stalker4 25 537 7.5 9.5 8.5 2.6 604 chrX 4763207 intergenic not near genes chrX 4763509 intergenic not near genes chrX 4763811 intergenic not near genes chrX_25_4760001 chrX_4760001 RAL-853_125b 3976 chrX 4792349 4792397 chrX 4792822 4792880 jockey 15 481 5.0 8.0 6.5 2.0 531 chrX 4792349 intergenic not near genes chrX 4792614 intergenic not near genes chrX 4792880 intergenic not near genes chrX_15_4790001 chrX_4790001 RAL-853_125b 3977 chrX 4827946 4827988 chrX 4835347 4835369 Stalker4 16 7410 7.0 8.0 7.5 1.9 7423 chrX 4827946 intergenic not near genes chrX 4831658 intergenic not near genes chrX 4835369 intergenic not near genes chrX_16_4830001 chrX_4830001 RAL-853_125b 3978 chrX 4827990 4827998 chrX 4835340 4835411 Stalker4 10 7401 5.5 5.5 5.5 1.5 7421 chrX 4827990 intergenic not near genes chrX 4831700 intergenic not near genes chrX 4835411 intergenic not near genes chrX_10_4830001 chrX_4830001 RAL-853_125b 3979 chrX 4869664 4869685 chrX 4869811 4869831 10 145 14.0 7.0 10.5 0.9 167 chrX 4869664 intron CG42594 + chrX 4869748 intron CG42594 + chrX 4869831 intron CG42594 + chrX_10_4865001 chrX_4865001 RAL-853_125b 3980 chrX 4878830 4878878 chrX 4878989 4879037 9 159 8.0 0.0 4.0 1.8 207 chrX 4878830 intron CG42594 + chrX 4878934 intron CG42594 + chrX 4879037 intron CG42594 + chrX_9_4875001 chrX_4875001 RAL-853_125b 3981 chrX 4946530 4946606 chrX 4946659 4946735 43 127 6.0 6.5 6.2 6.0 205 chrX 4946530 intron Ptp4E + chrX 4946632 intron Ptp4E + chrX 4946735 intron Ptp4E + chrX_43_4945001 chrX_4945001 RAL-853_125b 3982 chrX 4989999 4990062 chrX 4997263 4997326 roo 17 7263 5.5 6.0 5.8 2.5 7327 chrX 4989999 intron CR44833 - chrX 4993662 intron CR44833 - chrX 4997326 intron CR44833 - chrX_17_4990001 chrX_4990001 RAL-853_125b 3983 chrX 5055807 5055838 chrX 5055989 5056020 10 182 10.0 3.5 6.8 1.3 213 chrX 5055807 intron,intron CR44833 -,ovo + chrX 5055914 intron,intron CR44833 -,ovo + chrX 5056020 intron,intron CR44833 -,ovo + chrX_10_5055001 chrX_5055001 RAL-853_125b 3984 chrX 5096239 5096300 chrX 5103838 5103915 springer 17 7602 0.0 7.0 3.5 3.8 7676 chrX 5096239 intron,intron CG15465 +,rg + chrX 5100077 intron,intron CG15465 +,rg + chrX 5103915 intron,intron CG15465 +,rg + chrX_17_5100001 chrX_5100001 RAL-853_125b 3985 chrX 5120616 5120657 chrX 5120774 5120808 5 153 6.5 11.5 9.0 0.5 192 chrX 5120616 intron,intron CG15465 +,rg + chrX 5120712 intron,intron CG15465 +,rg + chrX 5120808 intron,intron CG15465 +,rg + chrX_5_5120001 chrX_5120001 RAL-853_125b 3986 chrX 5159683 5159749 chrX 5159828 5159894 19 144 4.0 4.0 4.0 3.8 211 chrX 5159683 intron,intron CG15465 +,rg + chrX 5159788 intron,intron CG15465 +,rg + chrX 5159894 intron,intron CG15465 +,rg + chrX_19_5155001 chrX_5155001 RAL-853_125b 3987 chrX 5220343 5220360 chrX 5220634 5220651 7 291 12.5 12.0 12.2 0.5 308 chrX 5220343 intron,intron CG15465 +,rg + chrX 5220497 intron,intron CG15465 +,rg + chrX 5220651 intron,intron CG15465 +,rg + chrX_7_5220001 chrX_5220001 RAL-853_125b 3988 chrX 5272774 5272851 chrX 5272911 5272989 24 136 5.0 0.0 2.5 6.9 215 chrX 5272774 intergenic not near genes chrX 5272882 intergenic not near genes chrX 5272989 intergenic not near genes chrX_24_5270001 chrX_5270001 RAL-853_125b 3989 chrX 5338661 5338726 chrX 5339964 5339975 jockey 10 1294 0.5 6.5 3.5 2.2 1314 chrX 5338661 intergenic not near genes chrX 5339318 intergenic not near genes chrX 5339975 intergenic SK + chrX_10_5335001 chrX_5335001 RAL-853_125b 3990 chrX 5345371 5345423 chrX 5345512 5345584 18 158 1.5 6.0 3.8 3.8 213 chrX 5345371 intron SK + chrX 5345478 intron SK + chrX 5345584 intron SK + chrX_18_5345001 chrX_5345001 RAL-853_125b 3991 chrX 5349236 5349304 chrX 5349363 5349431 32 127 9.5 6.5 8.0 3.6 195 chrX 5349236 intron SK + chrX 5349334 intron SK + chrX 5349431 intron SK + chrX_32_5345001 chrX_5345001 RAL-853_125b 3992 chrX 5441937 5441978 chrX 5442095 5442124 10 153 10.5 8.0 9.2 1.0 187 chrX 5441937 intergenic not near genes chrX 5442030 intergenic not near genes chrX 5442124 intergenic not near genes chrX_10_5440001 chrX_5440001 RAL-853_125b 3993 chrX 5481068 5481070 chrX 5485089 5485091 I-element 4 4021 0.0 8.0 4.0 0.8 4023 chrX 5481068 intron SPR + chrX 5483080 intron SPR + chrX 5485091 intron SPR + chrX_4_5480001 chrX_5480001 RAL-853_125b 3994 chrX 5524796 5524828 chrX 5528705 5528737 412 19 3908 10.0 0.0 5.0 3.2 3941 chrX 5524796 intergenic snoRNA:Psi28S-3342 - chrX 5526766 intergenic not near genes chrX 5528737 intergenic Vsx2 - chrX_19_5525001 chrX_5525001 RAL-853_125b 3995 chrX 5714114 5714183 chrX 5714241 5714310 35 126 8.5 11.5 10.0 3.2 196 chrX 5714114 intron CG33080 - chrX 5714212 intron CG33080 - chrX 5714310 intron CG33080 - chrX_35_5710001 chrX_5710001 RAL-853_125b 3996 chrX 5726205 5726274 chrX 5726599 5726666 7 394 6.0 1.5 3.8 1.5 461 chrX 5726205 intron CG32758 - chrX 5726436 intron CG32758 - chrX 5726666 intron CG32758 - chrX_7_5725001 chrX_5725001 RAL-853_125b 3997 chrX 5727373 5727416 chrX 5732162 5732173 Doc 14 4787 7.0 5.5 6.2 1.9 4800 chrX 5727373 intron CG32758 - chrX 5729773 intron CG32758 - chrX 5732173 intron CG32758 - chrX_14_5725001 chrX_5725001 RAL-853_125b 3998 chrX 5804976 5804977 chrX 5805160 5805198 6 183 40.0 52.0 46.0 0.1 222 chrX 5804976 exon Cpr5C + chrX 5805087 exon Cpr5C + chrX 5805198 exon Cpr5C + chrX_6_5805001 chrX_5805001 RAL-853_125b 3999 chrX 5883609 5883772 chrX 5883771 5884062 29 173 0.0 0.0 0.0 29.0 453 chrX 5883609 intron CR45668 - chrX 5883836 intron CR45668 - chrX 5884062 intron CR45668 - chrX_29_5880001 chrX_5880001 RAL-853_125b 4000 chrX 5883780 5883834 chrX 5884071 5884125 pogo 18 291 0.0 8.0 4.0 3.6 345 chrX 5883780 intron CR45668 - chrX 5883952 intron CR45668 - chrX 5884125 intron CR45668 - chrX_18_5880001 chrX_5880001 RAL-853_125b 4001 chrX 5884120 5884186 chrX 5884411 5884477 pogo 29 290 7.5 4.5 6.0 4.1 357 chrX 5884120 intron CR45668 - chrX 5884298 intron CR45668 - chrX 5884477 intron CR45668 - chrX_29_5880001 chrX_5880001 RAL-853_125b 4002 chrX 5886402 5886445 chrX 5886722 5886765 16 317 12.0 4.5 8.2 1.7 363 chrX 5886402 intron CR45668 - chrX 5886584 intron CR45668 - chrX 5886765 intron CR45668 - chrX_16_5885001 chrX_5885001 RAL-853_125b 4003 chrX 5886446 5886469 chrX 5886710 5886789 6 310 7.0 3.5 5.2 1.0 343 chrX 5886446 intron CR45668 - chrX 5886618 intron CR45668 - chrX 5886789 intron CR45668 - chrX_6_5885001 chrX_5885001 RAL-853_125b 4004 chrX 5938380 5938447 chrX 5938517 5938584 11 134 6.5 7.5 7.0 1.4 204 chrX 5938380 intron CG3726 + chrX 5938482 intron CG3726 + chrX 5938584 5` UTR CG3726 + chrX_11_5935001 chrX_5935001 RAL-853_125b 4005 chrX 6003286 6003310 chrX 6003382 6003441 12 127 2.0 10.5 6.2 1.7 155 chrX 6003286 intron CR44498 + chrX 6003364 intron CR44498 + chrX 6003441 intron CR44498 + chrX_12_6000001 chrX_6000001 RAL-853_125b 4006 chrX 6071396 6071435 chrX 6071540 6071546 13 138 7.5 13.0 10.2 1.2 150 chrX 6071396 intron Tsp5D - chrX 6071471 intron Tsp5D - chrX 6071546 intron Tsp5D - chrX_13_6070001 chrX_6070001 RAL-853_125b 4007 chrX 6171553 6171613 chrX 6179036 6179092 Quasimodo 12 7480 7.5 5.5 6.5 1.6 7539 chrX 6171553 intron Ca-alpha1T - chrX 6175322 intron Ca-alpha1T - chrX 6179092 intron Ca-alpha1T - chrX_12_6175001 chrX_6175001 RAL-853_125b 4008 chrX 6197856 6197859 chrX 6201861 6201864 4 4008 13.5 38.0 25.8 0.1 4008 chrX 6197856 intron CG32751 - chrX 6199860 5` UTR CG43090 - chrX 6201864 exon vanin-like - chrX_4_6195001 chrX_6195001 RAL-853_125b 4009 chrX 6215479 6215530 chrX 6215610 6215660 22 128 10.5 10.0 10.2 2.0 181 chrX 6215479 intergenic not near genes chrX 6215570 intergenic not near genes chrX 6215660 intergenic not near genes chrX_22_6215001 chrX_6215001 RAL-853_125b 4010 chrX 6312148 6312214 chrX 6312281 6312347 36 132 7.5 4.5 6.0 5.1 199 chrX 6312148 intron CG15894 + chrX 6312248 intron CG15894 + chrX 6312347 intron CG15894 + chrX_36_6310001 chrX_6310001 RAL-853_125b 4011 chrX 6314175 6314218 chrX 6314317 6314360 18 141 8.0 9.5 8.8 1.8 185 chrX 6314175 intron CG15894 + chrX 6314268 intron CG15894 + chrX 6314360 intron CG15894 + chrX_18_6310001 chrX_6310001 RAL-853_125b 4012 chrX 6335211 6335233 chrX 6337741 6337793 Tirant 10 2557 2.0 8.5 5.2 1.6 2582 chrX 6335211 intergenic not near genes chrX 6336502 intergenic not near genes chrX 6337793 5` UTR CG3842 + chrX_10_6335001 chrX_6335001 RAL-853_125b 4013 chrX 6344788 6344848 chrX 15529919 15529919 6 9185097 0.0 6.5 3.2 1.4 9185131 chrX 6344788 intergenic not near genes chrX 10937354 intron Myo10A + chrX 15529919 intron Ac13E - chrX_6_10935001 chrX_10935001 RAL-853_125b 4014 chrX 6392840 6392893 chrX 6397639 6397708 Doc 25 4812 10.5 9.0 9.8 2.3 4868 chrX 6392840 intergenic not near genes chrX 6395274 intergenic not near genes chrX 6397708 intergenic not near genes chrX_25_6395001 chrX_6395001 RAL-853_125b 4015 chrX 6429961 6429993 chrX 6435478 6435509 Rt1c 14 5514 14.5 17.0 15.8 0.8 5548 chrX 6429961 intron CG42340 - chrX 6432735 intron CG42340 - chrX 6435509 intron CG42340 - chrX_14_6430001 chrX_6430001 RAL-853_125b 4016 chrX 6445265 6445332 chrX 6451073 6451140 297 8 5808 5.0 6.0 5.5 1.2 5875 chrX 6445265 intron CG42340 - chrX 6448202 intron CG42340 - chrX 6451140 intron CG42340 - chrX_8_6445001 chrX_6445001 RAL-853_125b 4017 chrX 6487951 6487982 chrX 6488077 6488114 8 131 13.0 10.0 11.5 0.6 163 chrX 6487951 intron CG42340 - chrX 6488032 intron CG42340 - chrX 6488114 intron CG42340 - chrX_8_6485001 chrX_6485001 RAL-853_125b 4018 chrX 6562791 6562848 chrX 6571303 6571343 Tirant 23 8524 10.0 12.5 11.2 1.9 8552 chrX 6562791 intron CG34417 + chrX 6567067 intron CG34417 + chrX 6571343 intron CG34417 + chrX_23_6565001 chrX_6565001 RAL-853_125b 4019 chrX 6591804 6591849 chrX 6591939 6591984 18 135 12.5 0.0 6.2 2.5 180 chrX 6591804 intron Pat1 + chrX 6591894 intron Pat1 + chrX 6591984 intron Pat1 + chrX_18_6590001 chrX_6590001 RAL-853_125b 4020 chrX 6605447 6605493 chrX 6608518 6608565 Burdock 6 3072 3.5 11.5 7.5 0.7 3118 chrX 6605447 intron pigs + chrX 6607006 intron pigs + chrX 6608565 intron pigs + chrX_6_6605001 chrX_6605001 RAL-853_125b 4021 chrX 6618420 6618474 chrX 6618548 6618567 16 126 9.0 10.0 9.5 1.5 147 chrX 6618420 intron pigs + chrX 6618494 intron pigs + chrX 6618567 intron pigs + chrX_16_6615001 chrX_6615001 RAL-853_125b 4022 chrX 6652984 6653025 chrX 6653110 6653151 10 125 3.5 11.5 7.5 1.2 167 chrX 6652984 3` UTR pigs + chrX 6653068 intergenic CG3226 -,pigs + chrX 6653151 3` UTR CG3226 - chrX_10_6650001 chrX_6650001 RAL-853_125b 4023 chrX 6733631 6733670 chrX 6733770 6733809 21 134 10.0 13.5 11.8 1.6 178 chrX 6733631 intron,intron CG3168 -,CR43461 + chrX 6733720 intron,intron CG3168 -,CR43461 + chrX 6733809 intron,intron CG3168 -,CR43461 + chrX_21_6730001 chrX_6730001 RAL-853_125b 4024 chrX 6737477 6737552 chrX 6737610 6737683 19 125 5.5 11.5 8.5 2.0 206 chrX 6737477 intron CG3168 - chrX 6737580 intron CG3168 - chrX 6737683 intron CG3168 - chrX_19_6735001 chrX_6735001 RAL-853_125b 4025 chrX 6792036 6792088 chrX 6792177 6792229 6 141 5.0 8.0 6.5 0.8 193 chrX 6792036 intron C3G - chrX 6792132 intron C3G - chrX 6792229 intron C3G - chrX_6_6790001 chrX_6790001 RAL-853_125b 4026 chrX 6814235 6814302 chrX 6814363 6814429 14 125 6.5 1.5 4.0 2.8 194 chrX 6814235 exon iav + chrX 6814332 intron iav + chrX 6814429 intron iav + chrX_14_6810001 chrX_6810001 RAL-853_125b 4027 chrX 6865739 6865794 chrX 6865870 6865928 13 133 8.5 7.0 7.8 1.5 189 chrX 6865739 intron CG14434 - chrX 6865834 intron CG14434 - chrX 6865928 intron CG14434 - chrX_13_6865001 chrX_6865001 RAL-853_125b 4028 chrX 6897654 6897709 chrX 6897814 6897869 22 158 0.0 9.0 4.5 4.0 215 chrX 6897654 intergenic not near genes chrX 6897762 intergenic not near genes chrX 6897869 intergenic not near genes chrX_22_6895001 chrX_6895001 RAL-853_125b 4029 chrX 6901340 6901376 chrX 6901466 6901502 11 125 10.0 4.5 7.2 1.3 162 chrX 6901340 intergenic not near genes chrX 6901421 intergenic not near genes chrX 6901502 intergenic not near genes chrX_11_6900001 chrX_6900001 RAL-853_125b 4030 chrX 6941545 6941596 chrX 6941672 6941721 5 127 1.5 6.5 4.0 1.0 176 chrX 6941545 intron CG14431 + chrX 6941633 intron CG14431 + chrX 6941721 intron CG14431 + chrX_5_6940001 chrX_6940001 RAL-853_125b 4031 chrX 6961644 6961712 chrX 6961771 6961839 13 127 0.0 5.0 2.5 3.7 195 chrX 6961644 intron,intron CG14431 +,CG32732 - chrX 6961742 intron,intron CG14431 +,CG32732 - chrX 6961839 intron,intron CG14431 +,CG32732 - chrX_13_6960001 chrX_6960001 RAL-853_125b 4032 chrX 6984578 6984649 chrX 6984705 6984776 22 127 4.5 5.0 4.8 3.8 198 chrX 6984578 intron ogre - chrX 6984677 intron ogre - chrX 6984776 intron ogre - chrX_22_6980001 chrX_6980001 RAL-853_125b 4033 chrX 6988494 6988524 chrX 6988629 6988659 6 135 8.5 7.5 8.0 0.7 165 chrX 6988494 intron ogre - chrX 6988576 intron ogre - chrX 6988659 intron ogre - chrX_6_6985001 chrX_6985001 RAL-853_125b 4034 chrX 6989475 6989530 chrX 6989612 6989667 13 137 8.0 15.0 11.5 1.0 192 chrX 6989475 intron ogre - chrX 6989571 intron ogre - chrX 6989667 intron ogre - chrX_13_6985001 chrX_6985001 RAL-853_125b 4035 chrX 7023557 7023625 chrX 7030996 7031065 Tabor 17 7437 9.5 8.0 8.8 1.7 7508 chrX 7023557 intron CG12541 - chrX 7027311 intron CG12541 - chrX 7031065 intron CG12541 - chrX_17_7025001 chrX_7025001 RAL-853_125b 4036 chrX 7118539 7118558 chrX 7118668 7118687 8 129 6.5 8.0 7.2 1.0 148 chrX 7118539 intergenic not near genes chrX 7118613 intergenic not near genes chrX 7118687 intergenic not near genes chrX_8_7115001 chrX_7115001 RAL-853_125b 4037 chrX 7125222 7125263 chrX 7134426 7134472 roo 16 9209 0.0 10.0 5.0 2.7 9250 chrX 7125222 intergenic not near genes chrX 7129847 intergenic not near genes chrX 7134472 intergenic not near genes chrX_16_7125001 chrX_7125001 RAL-853_125b 4038 chrX 7138011 7138039 chrX 7138142 7138171 9 129 14.5 9.5 12.0 0.7 160 chrX 7138011 intron CG9650 + chrX 7138091 intron CG9650 + chrX 7138171 intron CG9650 + chrX_9_7135001 chrX_7135001 RAL-853_125b 4039 chrX 7138040 7138082 chrX 7138141 7138177 21 116 8.5 9.0 8.8 2.1 137 chrX 7138040 intron CG9650 + chrX 7138108 intron CG9650 + chrX 7138177 intron CG9650 + chrX_21_7135001 chrX_7135001 RAL-853_125b 4040 chrX 7467417 7467467 chrX 7467544 7467594 15 126 9.0 10.0 9.5 1.4 177 chrX 7467417 intergenic not near genes chrX 7467506 intergenic not near genes chrX 7467594 intergenic not near genes chrX_15_7465001 chrX_7465001 RAL-853_125b 4041 chrX 7480788 7480802 chrX 7482344 7482361 jockey 8 1560 7.0 13.5 10.2 0.7 1573 chrX 7480788 intergenic not near genes chrX 7481574 intergenic not near genes chrX 7482361 intergenic not near genes chrX_8_7480001 chrX_7480001 RAL-853_125b 4042 chrX 7570603 7570666 chrX 7570787 7570850 16 183 2.0 6.0 4.0 3.2 247 chrX 7570603 intergenic not near genes chrX 7570726 intergenic not near genes chrX 7570850 intergenic not near genes chrX_16_7570001 chrX_7570001 RAL-853_125b 4043 chrX 7702450 7702526 chrX 7702604 7702668 14 149 0.0 14.5 7.2 1.7 218 chrX 7702450 intron CHES-1-like - chrX 7702559 intron CHES-1-like - chrX 7702668 intron CHES-1-like - chrX_14_7700001 chrX_7700001 RAL-853_125b 4044 chrX 7702866 7702924 chrX 7703355 7703412 jockey 36 488 9.5 11.0 10.2 3.2 546 chrX 7702866 intron CHES-1-like - chrX 7703139 intron CHES-1-like - chrX 7703412 intron CHES-1-like - chrX_36_7700001 chrX_7700001 RAL-853_125b 4045 chrX 7832395 7832464 chrX 7832534 7832603 26 138 3.0 7.5 5.2 4.2 208 chrX 7832395 intron CG1402 + chrX 7832499 intron CG1402 + chrX 7832603 intron CG1402 + chrX_26_7830001 chrX_7830001 RAL-853_125b 4046 chrX 7845389 7845466 chrX 7845545 7845609 41 154 10.5 6.5 8.5 4.3 220 chrX 7845389 intergenic not near genes chrX 7845499 intergenic not near genes chrX 7845609 intergenic not near genes chrX_41_7845001 chrX_7845001 RAL-853_125b 4047 chrX 7845681 7845754 chrX 7847222 7847295 hopper2 28 1538 9.5 3.5 6.5 3.7 1614 chrX 7845681 intergenic not near genes chrX 7846488 intergenic not near genes chrX 7847295 intergenic not near genes chrX_28_7845001 chrX_7845001 RAL-853_125b 4048 chrX 7960834 7960903 chrX 7960973 7961033 12 138 6.5 11.0 8.8 1.2 199 chrX 7960834 intron,5` UTR sws -,CR45620 + chrX 7960934 intron sws - chrX 7961033 intron sws - chrX_12_7960001 chrX_7960001 RAL-853_125b 4049 chrX 8031391 8031448 chrX 8035750 8035807 Juan 31 4359 11.0 8.0 9.5 3.0 4416 chrX 8031391 intergenic not near genes chrX 8033599 intergenic not near genes chrX 8035807 3` UTR CG2233 - chrX_31_8030001 chrX_8030001 RAL-853_125b 4050 chrX 8063684 8063769 chrX 8063833 8063870 14 144 1.5 6.5 4.0 2.8 186 chrX 8063684 intron mys + chrX 8063777 intron mys + chrX 8063870 5` UTR mys + chrX_14_8060001 chrX_8060001 RAL-853_125b 4051 chrX 8066559 8066601 chrX 8066698 8066740 20 139 0.0 9.5 4.8 3.4 181 chrX 8066559 intron mys + chrX 8066650 intron mys + chrX 8066740 intron mys + chrX_20_8065001 chrX_8065001 RAL-853_125b 4052 chrX 8085524 8085597 chrX 8085660 8085733 26 136 6.0 5.0 5.5 4.0 209 chrX 8085524 intron,5` UTR CG2256 -,CR45535 + chrX 8085628 intron,5` UTR CG2256 -,CR45535 + chrX 8085733 intron,5` UTR CG2256 -,CR45535 + chrX_26_8085001 chrX_8085001 RAL-853_125b 4053 chrX 8092248 8092313 chrX 8092383 8092448 27 135 7.5 4.5 6.0 3.9 200 chrX 8092248 intron Ubc-E2H - chrX 8092348 intron Ubc-E2H - chrX 8092448 intron Ubc-E2H - chrX_27_8090001 chrX_8090001 RAL-853_125b 4054 chrX 8219627 8219680 chrX 8219809 8219818 22 193 7.5 9.5 8.5 2.3 191 chrX 8219627 intron sdt + chrX 8219722 intron sdt + chrX 8219818 intron sdt + chrX_22_8215001 chrX_8215001 RAL-853_125b 4055 chrX 8263722 8263787 chrX 8263858 8263923 11 136 0.0 4.5 2.2 3.4 201 chrX 8263722 intron CG1632 + chrX 8263822 intron CG1632 + chrX 8263923 intron CG1632 + chrX_11_8260001 chrX_8260001 RAL-853_125b 4056 chrX 8346969 8347005 chrX 8347134 8347170 11 165 6.5 13.0 9.8 1.0 201 chrX 8346969 intron nAChRalpha3 - chrX 8347070 intron nAChRalpha3 - chrX 8347170 intron nAChRalpha3 - chrX_11_8345001 chrX_8345001 RAL-853_125b 4057 chrX 8377870 8377896 chrX 8377997 8378023 10 127 10.5 5.5 8.0 1.1 153 chrX 8377870 intergenic not near genes chrX 8377946 intergenic not near genes chrX 8378023 intergenic not near genes chrX_10_8375001 chrX_8375001 RAL-853_125b 4058 chrX 8397864 8397873 chrX 8398078 8398087 7 214 0.0 14.5 7.2 0.9 223 chrX 8397864 5` UTR CG15345 - chrX 8397976 5` UTR CG15345 - chrX 8398087 5` UTR CG15345 - chrX_7_8395001 chrX_8395001 RAL-853_125b 4059 chrX 8421463 8421490 chrX 8421605 8421610 11 140 6.0 16.5 11.2 0.9 147 chrX 8421463 intron Trf2 + chrX 8421536 intron Trf2 + chrX 8421610 intron Trf2 + chrX_11_8420001 chrX_8420001 RAL-853_125b 4060 chrX 8440737 8440753 chrX 8440874 8440890 7 136 10.0 8.0 9.0 0.7 153 chrX 8440737 exon CG1440 + chrX 8440814 3` UTR CG1440 + chrX 8440890 3` UTR CG1440 + chrX_7_8440001 chrX_8440001 RAL-853_125b 4061 chrX 8544098 8544163 chrX 8544227 8544292 14 129 1.5 5.0 3.2 3.3 194 chrX 8544098 intron Nrg + chrX 8544195 intron Nrg + chrX 8544292 intron Nrg + chrX_14_8540001 chrX_8540001 RAL-853_125b 4062 chrX 8705658 8705680 chrX 8706160 8706182 4 502 0.5 1.5 1.0 2.0 524 chrX 8705658 intergenic not near genes chrX 8705920 intergenic not near genes chrX 8706182 intergenic not near genes chrX_4_8705001 chrX_8705001 RAL-853_125b 4063 chrX 8708716 8708735 chrX 8708849 8708868 10 133 51.5 40.5 46.0 0.2 152 chrX 8708716 intergenic not near genes chrX 8708792 intergenic not near genes chrX 8708868 intergenic not near genes chrX_10_8705001 chrX_8705001 RAL-853_125b 4064 chrX 8708691 8708767 chrX 8708869 8708900 18 136 54.5 34.0 44.2 0.4 209 chrX 8708691 intergenic not near genes chrX 8708796 intergenic not near genes chrX 8708900 intergenic not near genes chrX_18_8705001 chrX_8705001 RAL-853_125b 4065 chrX 8772203 8772247 chrX 8772330 8772376 17 126 9.5 8.0 8.8 1.7 173 chrX 8772203 intron Lim1 - chrX 8772290 intron Lim1 - chrX 8772376 intron Lim1 - chrX_17_8770001 chrX_8770001 RAL-853_125b 4066 chrX 8894957 8895002 chrX 8895092 8895138 8 136 7.0 6.5 6.8 1.0 181 chrX 8894957 intron Moe - chrX 8895048 intron Moe - chrX 8895138 intron Moe - chrX_8_8895001 chrX_8895001 RAL-853_125b 4067 chrX 8922289 8922351 chrX 8922768 8922824 jockey 27 483 12.0 5.5 8.8 2.8 535 chrX 8922289 intron rdgA + chrX 8922556 intron rdgA + chrX 8922824 intron rdgA + chrX_27_8920001 chrX_8920001 RAL-853_125b 4068 chrX 8940605 8940658 chrX 8940736 8940789 16 130 7.5 2.5 5.0 2.7 184 chrX 8940605 intron rdgA + chrX 8940697 intron rdgA + chrX 8940789 intron rdgA + chrX_16_8940001 chrX_8940001 RAL-853_125b 4069 chrX 8948713 8948786 chrX 8956273 8956346 roo 18 7560 0.0 4.5 2.2 5.6 7633 chrX 8948713 intron rdgA + chrX 8952530 intron rdgA + chrX 8956346 intron rdgA + chrX_18_8950001 chrX_8950001 RAL-853_125b 4070 chrX 8968815 8968857 chrX 8968942 8968979 12 127 12.0 16.0 14.0 0.8 164 chrX 8968815 intron rdgA + chrX 8968897 intron rdgA + chrX 8968979 intron rdgA + chrX_12_8965001 chrX_8965001 RAL-853_125b 4071 chrX 9042011 9042021 chrX 9042170 9042180 8 159 0.0 9.5 4.8 1.4 169 chrX 9042011 intron,intron CR43836 -,CG42388 + chrX 9042096 intron,intron CR43836 -,CG42388 + chrX 9042180 intron,intron CR43836 -,CG42388 + chrX_8_9040001 chrX_9040001 RAL-853_125b 4072 chrX 9187969 9188025 chrX 9188096 9188152 24 127 4.5 6.0 5.2 3.9 183 chrX 9187969 3` UTR mei-P26 + chrX 9188060 3` UTR mei-P26 + chrX 9188152 3` UTR mei-P26 + chrX_24_9185001 chrX_9185001 RAL-853_125b 4073 chrX 9190742 9190781 chrX 9190883 9190924 8 139 9.5 6.5 8.0 0.9 182 chrX 9190742 intergenic CG12115 - chrX 9190833 intergenic CG12115 - chrX 9190924 intergenic CG12115 - chrX_8_9190001 chrX_9190001 RAL-853_125b 4074 chrX 9430186 9430226 chrX 9430634 9430674 13 448 12.0 7.5 9.8 1.2 488 chrX 9430186 intron mgl - chrX 9430430 intron mgl - chrX 9430674 intron mgl - chrX_13_9430001 chrX_9430001 RAL-853_125b 4075 chrX 9457813 9457840 chrX 9457940 9457967 5 127 2.5 4.5 3.5 1.1 154 chrX 9457813 intron mgl - chrX 9457890 intron mgl - chrX 9457967 intron mgl - chrX_5_9455001 chrX_9455001 RAL-853_125b 4076 chrX 9503211 9503211 chrX 22383088 22383378 13 12880120 16.5 88.0 52.2 0.2 12880167 chrX 9503211 3` UTR CG32700 - chrX 15943294 intron CG8924 + chrX 22383378 intergenic not near genes chrX_13_15940001 chrX_15940001 RAL-853_125b 4077 chrX 9508095 9508155 chrX 9509663 9509723 jockey 23 1567 11.0 9.5 10.2 2.1 1628 chrX 9508095 intron CG32700 - chrX 9508909 intron CG32700 - chrX 9509723 intron CG32700 - chrX_23_9505001 chrX_9505001 RAL-853_125b 4078 chrX 9575754 9575814 chrX 9576123 9576188 mdg3 36 372 15.0 7.0 11.0 3.0 434 chrX 9575754 intron,exon CG32699 -,CG42395 - chrX 9575971 intron,intron CG32699 -,CG42395 - chrX 9576188 intron,5` UTR CG32699 -,CG42395 - chrX_36_9575001 chrX_9575001 RAL-853_125b 4079 chrX 9599127 9599197 chrX 9599250 9599325 31 126 2.5 5.5 4.0 6.2 198 chrX 9599127 intergenic not near genes chrX 9599226 intergenic not near genes chrX 9599325 intergenic not near genes chrX_31_9595001 chrX_9595001 RAL-853_125b 4080 chrX 9616962 9617013 chrX 9617091 9617091 9 111 6.0 0.0 3.0 2.2 129 chrX 9616962 intron CG42797 + chrX 9617026 intron CG42797 + chrX 9617091 intron CG42797 + chrX_9_9615001 chrX_9615001 RAL-853_125b 4081 chrX 9732332 9732343 chrX 9732458 9732469 8 125 6.5 5.5 6.0 1.1 137 chrX 9732332 intron Sp1 + chrX 9732400 intron Sp1 + chrX 9732469 intron Sp1 + chrX_8_9730001 chrX_9730001 RAL-853_125b 4082 chrX 9839301 9839326 chrX 9839434 9839458 11 132 3.0 6.0 4.5 2.0 157 chrX 9839301 intron CG32698 + chrX 9839380 intron CG32698 + chrX 9839458 intron CG32698 + chrX_11_9835001 chrX_9835001 RAL-853_125b 4083 chrX 9923356 9923419 chrX 9923497 9923560 14 138 5.0 10.0 7.5 1.6 204 chrX 9923356 intergenic not near genes chrX 9923458 intergenic not near genes chrX 9923560 intergenic not near genes chrX_14_9920001 chrX_9920001 RAL-853_125b 4084 chrX 9988486 9988519 chrX 9988630 9988673 11 153 6.5 6.0 6.2 1.5 187 chrX 9988486 intergenic not near genes chrX 9988580 intergenic not near genes chrX 9988673 intergenic not near genes chrX_11_9985001 chrX_9985001 RAL-853_125b 4085 chrX 10077180 10077214 chrX 10077311 10077345 7 129 9.5 11.5 10.5 0.6 165 chrX 10077180 intron ZAP3 - chrX 10077262 intron ZAP3 - chrX 10077345 intron ZAP3 - chrX_7_10075001 chrX_10075001 RAL-853_125b 4086 chrX 10138168 10138241 chrX 10145722 10145795 412 26 7554 5.0 6.0 5.5 4.0 7627 chrX 10138168 intron,intron RhoU +,CR44894 - chrX 10141982 intron,intron RhoU +,CR44894 - chrX 10145795 intron,intron RhoU +,CR44894 - chrX_26_10140001 chrX_10140001 RAL-853_125b 4087 chrX 10151878 10151930 chrX 10152005 10152057 12 125 6.0 6.5 6.2 1.7 179 chrX 10151878 intron CR44894 - chrX 10151968 intron CR44894 - chrX 10152057 intron CR44894 - chrX_12_10150001 chrX_10150001 RAL-853_125b 4088 chrX 10216800 10216846 chrX 10216928 10216977 23 128 12.0 13.5 12.8 1.7 177 chrX 10216800 3` UTR l(1)G0230 + chrX 10216888 3` UTR l(1)G0230 + chrX 10216977 3` UTR l(1)G0230 + chrX_23_10215001 chrX_10215001 RAL-853_125b 4089 chrX 10267307 10267318 chrX 10276507 10276518 roo 4 9200 0.0 6.5 3.2 1.0 9211 chrX 10267307 3` UTR alpha-Man-I - chrX 10271912 intron alpha-Man-I - chrX 10276518 3` UTR alpha-Man-I - chrX_4_10270001 chrX_10270001 RAL-853_125b 4090 chrX 10306021 10306079 chrX 10306152 10306213 9 132 5.0 0.0 2.5 2.6 192 chrX 10306021 intron alpha-Man-I - chrX 10306117 intron alpha-Man-I - chrX 10306213 intron alpha-Man-I - chrX_9_10305001 chrX_10305001 RAL-853_125b 4091 chrX 10317536 10317568 chrX 10317644 10317696 6 125 0.0 5.5 2.8 1.6 160 chrX 10317536 intron alpha-Man-I - chrX 10317616 intron alpha-Man-I - chrX 10317696 intron alpha-Man-I - chrX_6_10315001 chrX_10315001 RAL-853_125b 4092 chrX 10348755 10348812 chrX 10356370 10356427 springer 7 7615 6.5 5.5 6.0 1.0 7672 chrX 10348755 intergenic snoRNA:U3:9B + chrX 10352591 intergenic not near genes chrX 10356427 intergenic l(1)G0289 - chrX_7_10350001 chrX_10350001 RAL-853_125b 4093 chrX 10361672 10361677 chrX 10361819 10361824 4 147 7.5 7.0 7.2 0.5 152 chrX 10361672 intron l(1)G0289 - chrX 10361748 intron l(1)G0289 - chrX 10361824 intron l(1)G0289 - chrX_4_10360001 chrX_10360001 RAL-853_125b 4094 chrX 10361678 10361734 chrX 10361818 10361881 24 147 3.0 7.0 5.0 4.0 203 chrX 10361678 intron l(1)G0289 - chrX 10361780 intron l(1)G0289 - chrX 10361881 intron l(1)G0289 - chrX_24_10360001 chrX_10360001 RAL-853_125b 4095 chrX 10440657 10440706 chrX 10440786 10440835 20 128 8.5 12.0 10.2 1.8 178 chrX 10440657 intron CG32683 - chrX 10440746 intron CG32683 - chrX 10440835 intron CG32683 - chrX_20_10440001 chrX_10440001 RAL-853_125b 4096 chrX 10525021 10525076 chrX 10532142 10532195 297 6 7120 10.0 7.0 8.5 0.6 7174 chrX 10525021 intron spri - chrX 10528608 intron spri - chrX 10532195 intron spri - chrX_6_10525001 chrX_10525001 RAL-853_125b 4097 chrX 10532460 10532526 chrX 10532589 10532655 22 129 11.0 9.5 10.2 2.0 195 chrX 10532460 intron spri - chrX 10532558 intron spri - chrX 10532655 intron spri - chrX_22_10530001 chrX_10530001 RAL-853_125b 4098 chrX 10550822 10550880 chrX 10552328 10552395 hobo 10 1514 7.0 7.5 7.2 1.2 1573 chrX 10550822 intron spri - chrX 10551608 intron spri - chrX 10552395 intron spri - chrX_10_10550001 chrX_10550001 RAL-853_125b 4099 chrX 10651603 10651641 chrX 10651769 10651807 11 166 0.0 14.5 7.2 1.3 204 chrX 10651603 intron X11Lbeta + chrX 10651705 intron X11Lbeta + chrX 10651807 intron X11Lbeta + chrX_11_10650001 chrX_10650001 RAL-853_125b 4100 chrX 10668875 10668941 chrX 10669007 10669037 17 126 6.5 2.5 4.5 3.1 162 chrX 10668875 intron X11Lbeta + chrX 10668956 intron X11Lbeta + chrX 10669037 intron X11Lbeta + chrX_17_10665001 chrX_10665001 RAL-853_125b 4101 chrX 10686006 10686077 chrX 10691193 10691264 roo 32 5185 9.5 0.0 4.8 5.5 5258 chrX 10686006 intron X11Lbeta + chrX 10688635 intron X11Lbeta + chrX 10691264 intron X11Lbeta + chrX_32_10685001 chrX_10685001 RAL-853_125b 4102 chrX 10772636 10772680 chrX 10772769 10772813 Tirant 17 128 10.5 8.0 9.2 1.7 177 chrX 10772636 intron CG15211 + chrX 10772724 intron CG15211 + chrX 10772813 intron CG15211 + chrX_17_10770001 chrX_10770001 RAL-853_125b 4103 chrX 10772682 10772696 chrX 10772760 10772829 Tirant 11 115 6.0 6.0 6.0 1.6 147 chrX 10772682 intron CG15211 + chrX 10772756 intron CG15211 + chrX 10772829 intron CG15211 + chrX_11_10770001 chrX_10770001 RAL-853_125b 4104 chrX 10802987 10803035 chrX 10803122 10803170 16 135 11.5 10.5 11.0 1.3 183 chrX 10802987 intron Imp - chrX 10803078 intron Imp - chrX 10803170 intron Imp - chrX_16_10800001 chrX_10800001 RAL-853_125b 4105 chrX 10970769 10970841 chrX 10970923 10970995 16 153 3.0 4.5 3.8 3.3 226 chrX 10970769 intron CG42339 - chrX 10970882 intron CG42339 - chrX 10970995 intron CG42339 - chrX_16_10970001 chrX_10970001 RAL-853_125b 4106 chrX 11026440 11026471 chrX 11026761 11026797 7 321 5.5 17.5 11.5 0.6 357 chrX 11026440 intron CG42339 - chrX 11026618 intron CG42339 - chrX 11026797 intron CG42339 - chrX_7_11025001 chrX_11025001 RAL-853_125b 4107 chrX 11082140 11082207 chrX 11082544 11082611 31 403 7.0 5.5 6.2 4.3 471 chrX 11082140 intron sev - chrX 11082376 intron sev - chrX 11082611 intron sev - chrX_31_11080001 chrX_11080001 RAL-853_125b 4108 chrX 11095955 11096016 chrX 11103107 11103168 HMS-Beagle 20 7152 6.5 12.5 9.5 1.9 7213 chrX 11095955 intergenic not near genes chrX 11099562 intergenic not near genes chrX 11103168 intron CG42249 + chrX_20_11095001 chrX_11095001 RAL-853_125b 4109 chrX 11109417 11109417 chrX 12946234 12946234 4 1836817 5.0 27.0 16.0 0.2 1836817 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946234 3` UTR fne + chrX_4_12025001 chrX_12025001 RAL-853_125b 4110 chrX 11165825 11165899 chrX 11166207 11166281 8 382 4.5 6.0 5.2 1.3 456 chrX 11165825 intergenic not near genes chrX 11166053 intergenic not near genes chrX 11166281 intergenic not near genes chrX_8_11165001 chrX_11165001 RAL-853_125b 4111 chrX 11184197 11184255 chrX 11189326 11189384 flea 13 5128 8.5 6.0 7.2 1.6 5187 chrX 11184197 intergenic not near genes chrX 11186790 intergenic not near genes chrX 11189384 intergenic not near genes chrX_13_11185001 chrX_11185001 RAL-853_125b 4112 chrX 11191848 11191919 chrX 11191976 11192047 17 128 6.5 7.5 7.0 2.1 199 chrX 11191848 intergenic not near genes chrX 11191948 intergenic not near genes chrX 11192047 intergenic not near genes chrX_17_11190001 chrX_11190001 RAL-853_125b 4113 chrX 11268535 11268579 chrX 11270078 11270122 hopper2 13 1539 0.0 9.0 4.5 2.4 1587 chrX 11268535 intron CG44422 - chrX 11269328 intron CG44422 - chrX 11270122 intron CG44422 - chrX_13_11265001 chrX_11265001 RAL-853_125b 4114 chrX 11277309 11277574 chrX 11277453 11277708 14 139 10.5 0.0 5.2 2.3 399 chrX 11277309 intron CG44422 - chrX 11277508 intron CG44422 - chrX 11277708 intron CG44422 - chrX_14_11275001 chrX_11275001 RAL-853_125b 4115 chrX 11277609 11277631 chrX 11277743 11277765 6 134 8.5 13.0 10.8 0.5 156 chrX 11277609 intron CG44422 - chrX 11277687 intron CG44422 - chrX 11277765 intron CG44422 - chrX_6_11275001 chrX_11275001 RAL-853_125b 4116 chrX 11292958 11292969 chrX 11293084 11293095 5 126 10.5 0.0 5.2 0.8 137 chrX 11292958 intron CG44422 - chrX 11293026 intron CG44422 - chrX 11293095 intron CG44422 - chrX_5_11290001 chrX_11290001 RAL-853_125b 4117 chrX 11299062 11299065 chrX 11299195 11299198 4 133 6.0 0.0 3.0 1.0 136 chrX 11299062 intron CG44422 - chrX 11299130 intron CG44422 - chrX 11299198 intron CG44422 - chrX_4_11295001 chrX_11295001 RAL-853_125b 4118 chrX 11312018 11312081 chrX 11319421 11319472 Stalker2 16 7395 7.5 6.0 6.8 2.1 7454 chrX 11312018 intergenic not near genes chrX 11315745 intergenic not near genes chrX 11319472 intergenic not near genes chrX_16_11315001 chrX_11315001 RAL-853_125b 4119 chrX 11409462 11409539 chrX 11409598 11409673 13 133 3.0 7.0 5.0 2.2 211 chrX 11409462 3` UTR dlg1 + chrX 11409568 3` UTR dlg1 + chrX 11409673 3` UTR dlg1 + chrX_13_11405001 chrX_11405001 RAL-853_125b 4120 chrX 11534999 11535029 chrX 11541518 11541549 Burdock 7 6520 16.0 0.0 8.0 0.8 6550 chrX 11534999 intron Drak + chrX 11538274 intron Drak + chrX 11541549 intron Drak + chrX_7_11535001 chrX_11535001 RAL-853_125b 4121 chrX 11541512 11541532 chrX 11541970 11541976 9 461 0.0 0.0 0.0 9.0 464 chrX 11541512 intron Drak + chrX 11541744 intron Drak + chrX 11541976 intron Drak + chrX_9_11540001 chrX_11540001 RAL-853_125b 4122 chrX 11564536 11564561 chrX 11564651 11564679 6 119 9.5 8.5 9.0 0.6 143 chrX 11564536 exon RpII215 - chrX 11564608 intron RpII215 - chrX 11564679 intron RpII215 - chrX_6_11560001 chrX_11560001 RAL-853_125b 4123 chrX 11564563 11564592 chrX 11564646 11564707 16 125 6.0 8.0 7.0 2.0 144 chrX 11564563 exon RpII215 - chrX 11564635 intron RpII215 - chrX 11564707 intron RpII215 - chrX_16_11560001 chrX_11560001 RAL-853_125b 4124 chrX 11633371 11633441 chrX 11640475 11640545 297 23 7104 8.5 7.0 7.8 2.6 7174 chrX 11633371 intron Ptp10D + chrX 11636958 intron Ptp10D + chrX 11640545 intron Ptp10D + chrX_23_11635001 chrX_11635001 RAL-853_125b 4125 chrX 11645068 11645108 chrX 11648287 11648327 NOF 11 3219 5.5 2.5 4.0 2.2 3259 chrX 11645068 intron Ptp10D + chrX 11646698 intron Ptp10D + chrX 11648327 intron Ptp10D + chrX_11_11645001 chrX_11645001 RAL-853_125b 4126 chrX 11761957 11761998 chrX 11762086 11762127 11 127 7.5 8.0 7.8 1.2 170 chrX 11761957 intron m + chrX 11762042 intron m + chrX 11762127 intron m + chrX_11_11760001 chrX_11760001 RAL-853_125b 4127 chrX 11782895 11782916 chrX 11783025 11783046 6 130 6.5 12.0 9.2 0.6 151 chrX 11782895 intergenic not near genes chrX 11782970 intergenic not near genes chrX 11783046 intergenic not near genes chrX_6_11780001 chrX_11780001 RAL-853_125b 4128 chrX 11798968 11799029 chrX 11799104 11799165 11 136 5.5 7.0 6.2 1.5 197 chrX 11798968 intron CkIIbeta + chrX 11799066 intron CkIIbeta + chrX 11799165 intron CkIIbeta + chrX_11_11795001 chrX_11795001 RAL-853_125b 4129 chrX 11804629 11804690 chrX 11804783 11804844 14 154 5.0 8.0 6.5 1.9 215 chrX 11804629 intron Hsc70-3 - chrX 11804736 intron Hsc70-3 - chrX 11804844 intron Hsc70-3 - chrX_14_11800001 chrX_11800001 RAL-853_125b 4130 chrX 11838975 11839054 chrX 11839283 11839341 13 301 4.5 6.5 5.5 2.0 366 chrX 11838975 intergenic not near genes chrX 11839158 intergenic Cyp28c1 + chrX 11839341 intergenic Cyp28c1 + chrX_13_11835001 chrX_11835001 RAL-853_125b 4131 chrX 11945023 11945076 chrX 11945176 11945229 8 153 4.5 2.0 3.2 1.9 206 chrX 11945023 intron cac - chrX 11945126 intron cac - chrX 11945229 intron cac - chrX_8_11945001 chrX_11945001 RAL-853_125b 4132 chrX 12136417 12136495 chrX 12136549 12136621 8 128 1.0 6.0 3.5 1.8 204 chrX 12136417 intron Ten-a + chrX 12136519 intron Ten-a + chrX 12136621 intron Ten-a + chrX_8_12135001 chrX_12135001 RAL-853_125b 4133 chrX 12168100 12168151 chrX 12173592 12173622 I-element 6 5488 6.5 4.5 5.5 0.9 5522 chrX 12168100 intron Ten-a + chrX 12170861 intron Ten-a + chrX 12173622 intron Ten-a + chrX_6_12170001 chrX_12170001 RAL-853_125b 4134 chrX 12176709 12176766 chrX 12176835 12176892 33 125 1.0 11.0 6.0 4.7 183 chrX 12176709 intron,3` UTR Ten-a +,CG1924 - chrX 12176800 intron,3` UTR Ten-a +,CG1924 - chrX 12176892 intron,3` UTR Ten-a +,CG1924 - chrX_33_12175001 chrX_12175001 RAL-853_125b 4135 chrX 12202731 12202796 chrX 12202865 12202930 14 134 5.5 7.5 6.5 1.9 199 chrX 12202731 intron Ten-a + chrX 12202830 intron Ten-a + chrX 12202930 intron Ten-a + chrX_14_12200001 chrX_12200001 RAL-853_125b 4136 chrX 12245655 12245706 chrX 12245776 12245839 11 123 1.0 4.0 2.5 3.1 184 chrX 12245655 intron Ten-a + chrX 12245747 intron Ten-a + chrX 12245839 intron Ten-a + chrX_11_12245001 chrX_12245001 RAL-853_125b 4137 chrX 12246917 12246959 chrX 12247059 12247101 6 142 4.5 0.0 2.2 1.9 184 chrX 12246917 intron Ten-a + chrX 12247009 intron Ten-a + chrX 12247101 intron Ten-a + chrX_6_12245001 chrX_12245001 RAL-853_125b 4138 chrX 12248706 12248732 chrX 12248848 12248874 9 139 6.0 6.0 6.0 1.3 168 chrX 12248706 intron Ten-a + chrX 12248790 intron Ten-a + chrX 12248874 intron Ten-a + chrX_9_12245001 chrX_12245001 RAL-853_125b 4139 chrX 12248733 12248770 chrX 12248844 12248912 10 135 6.0 6.0 6.0 1.4 179 chrX 12248733 intron Ten-a + chrX 12248822 intron Ten-a + chrX 12248912 intron Ten-a + chrX_10_12245001 chrX_12245001 RAL-853_125b 4140 chrX 12272794 12272868 chrX 12272923 12272997 22 129 5.0 2.5 3.8 4.6 203 chrX 12272794 intron Ten-a + chrX 12272896 intron Ten-a + chrX 12272997 intron Ten-a + chrX_22_12270001 chrX_12270001 RAL-853_125b 4141 chrX 12277158 12277203 chrX 12277279 12277345 6 138 7.0 8.5 7.8 0.7 187 chrX 12277158 intron Ten-a + chrX 12277252 intron Ten-a + chrX 12277345 intron Ten-a + chrX_6_12275001 chrX_12275001 RAL-853_125b 4142 chrX 12292296 12292358 chrX 12292425 12292487 11 129 5.5 5.0 5.2 1.8 191 chrX 12292296 intron Ten-a + chrX 12292392 intron Ten-a + chrX 12292487 intron Ten-a + chrX_11_12290001 chrX_12290001 RAL-853_125b 4143 chrX 12350728 12350766 chrX 12350859 12350877 17 128 9.5 0.0 4.8 2.9 149 chrX 12350728 intergenic not near genes chrX 12350802 intergenic not near genes chrX 12350877 intergenic not near genes chrX_17_12350001 chrX_12350001 RAL-853_125b 4144 chrX 12375442 12375500 chrX 12375590 12375648 22 146 9.5 6.5 8.0 2.4 206 chrX 12375442 intergenic Ir11a - chrX 12375545 intergenic Ir11a - chrX 12375648 exon Ir11a - chrX_22_12375001 chrX_12375001 RAL-853_125b 4145 chrX 12381850 12381884 chrX 12385802 12385806 flea 5 3945 4.5 9.5 7.0 0.6 3956 chrX 12381850 intergenic not near genes chrX 12383828 intergenic not near genes chrX 12385806 intergenic not near genes chrX_5_12380001 chrX_12380001 RAL-853_125b 4146 chrX 12381887 12381900 chrX 12385789 12385795 flea 5 3918 1.0 8.5 4.8 0.9 3908 chrX 12381887 intergenic not near genes chrX 12383841 intergenic not near genes chrX 12385795 intergenic not near genes chrX_5_12380001 chrX_12380001 RAL-853_125b 4147 chrX 12449812 12449840 chrX 12449963 12449991 11 151 7.0 3.0 5.0 1.8 179 chrX 12449812 intron Pkcdelta + chrX 12449902 intron Pkcdelta + chrX 12449991 intron Pkcdelta + chrX_11_12445001 chrX_12445001 RAL-853_125b 4148 chrX 12492950 12492961 chrX 13057293 13057304 6 564343 11.0 25.5 18.2 0.3 564354 chrX 12492950 3` UTR Lsp1alpha + chrX 12775127 3` UTR CG32647 - chrX 13057304 intron rad + chrX_6_12775001 chrX_12775001 RAL-853_125b 4149 chrX 12528819 12528836 chrX 12528945 12528962 8 126 5.0 3.5 4.2 1.5 143 chrX 12528819 intron CG43921 - chrX 12528890 intron CG43921 - chrX 12528962 intron CG43921 - chrX_8_12525001 chrX_12525001 RAL-853_125b 4150 chrX 12533771 12533813 chrX 12533898 12533917 10 125 0.5 6.5 3.5 2.2 146 chrX 12533771 intron CG43921 - chrX 12533844 intron CG43921 - chrX 12533917 intron CG43921 - chrX_10_12530001 chrX_12530001 RAL-853_125b 4151 chrX 9845361 9845361 chrX 12546496 12546496 gypsy5 4 2701135 37.5 32.0 34.8 0.1 2701135 chrX 9845361 intron CG32698 + chrX 11195928 intergenic not near genes chrX 12546496 intron CG43921 - chrX_4_11195001 chrX_11195001 RAL-853_125b 4152 chrX 12557116 12557156 chrX 12557231 12557272 8 117 12.0 9.5 10.8 0.7 156 chrX 12557116 intron CG43921 - chrX 12557194 intron CG43921 - chrX 12557272 intron CG43921 - chrX_8_12555001 chrX_12555001 RAL-853_125b 4153 chrX 12635378 12635430 chrX 12635513 12635565 13 135 3.0 4.5 3.8 2.7 187 chrX 12635378 intron Tomosyn + chrX 12635472 intron Tomosyn + chrX 12635565 intron Tomosyn + chrX_13_12635001 chrX_12635001 RAL-853_125b 4154 chrX 5190138 5190150 chrX 12649913 12649914 4 7459770 21.5 21.5 21.5 0.2 7459776 chrX 5190138 intron,intron CG15465 +,rg + chrX 8920026 intron,3` UTR rdgA +,CR44111 - chrX 12649914 intron Tomosyn + chrX_4_8920001 chrX_8920001 RAL-853_125b 4155 chrX 12718186 12718263 chrX 12718317 12718390 26 129 5.0 6.5 5.8 3.8 204 chrX 12718186 intron,intron Smr -,CR43963 - chrX 12718288 intron,intron Smr -,CR43963 - chrX 12718390 intron,intron Smr -,CR43963 - chrX_26_12715001 chrX_12715001 RAL-853_125b 4156 chrX 12752232 12752304 chrX 12752369 12752441 28 137 7.5 7.5 7.5 3.3 209 chrX 12752232 5` UTR CR44619 + chrX 12752336 5` UTR CR44619 + chrX 12752441 intron CR44619 + chrX_28_12750001 chrX_12750001 RAL-853_125b 4157 chrX 12754655 12754677 chrX 12754893 12754915 8 236 9.5 21.0 15.2 0.5 260 chrX 12754655 intergenic CR44619 + chrX 12754785 intergenic CR44619 + chrX 12754915 intergenic CR44619 + chrX_8_12750001 chrX_12750001 RAL-853_125b 4158 chrX 12757052 12757096 chrX 12757201 12757245 9 149 4.0 2.0 3.0 2.2 193 chrX 12757052 3` UTR ade5 - chrX 12757148 3` UTR ade5 - chrX 12757245 3` UTR ade5 - chrX_9_12755001 chrX_12755001 RAL-853_125b 4159 chrX 12767338 12767404 chrX 12767603 12767668 27 265 8.5 6.5 7.5 3.2 330 chrX 12767338 exon CG3812 + chrX 12767503 intron CG3812 + chrX 12767668 intron CG3812 + chrX_27_12765001 chrX_12765001 RAL-853_125b 4160 chrX 12785402 12785439 chrX 12785529 12785566 10 126 6.0 11.0 8.5 1.1 164 chrX 12785402 intergenic Pde9 -,CG32647 - chrX 12785484 intergenic Pde9 - chrX 12785566 3` UTR Pde9 - chrX_10_12785001 chrX_12785001 RAL-853_125b 4161 chrX 12808433 12808481 chrX 12808575 12808617 6 141 7.0 9.0 8.0 0.7 184 chrX 12808433 intron Pde9 - chrX 12808525 intron Pde9 - chrX 12808617 intron Pde9 - chrX_6_12805001 chrX_12805001 RAL-853_125b 4162 chrX 12837041 12837052 chrX 12837746 12837757 7 704 10.0 0.0 5.0 1.2 716 chrX 12837041 intron Pde9 - chrX 12837399 intron Pde9 - chrX 12837757 intron Pde9 - chrX_7_12835001 chrX_12835001 RAL-853_125b 4163 chrX 12858227 12858268 chrX 12858359 12858400 21 132 5.5 9.0 7.2 2.6 173 chrX 12858227 intron Pde9 - chrX 12858314 intron Pde9 - chrX 12858400 intron Pde9 - chrX_21_12855001 chrX_12855001 RAL-853_125b 4164 chrX 12930550 12930601 chrX 12937716 12937767 HMS-Beagle 15 7166 5.5 6.5 6.0 2.1 7217 chrX 12930550 intron fne + chrX 12934158 intron fne + chrX 12937767 intron fne + chrX_15_12930001 chrX_12930001 RAL-853_125b 4165 chrX 11109417 11109417 chrX 12946233 12946233 4 1836816 5.0 27.0 16.0 0.2 1836816 chrX 11109417 intron Hsp60 + chrX 12027825 exon Usp7 - chrX 12946233 3` UTR fne + chrX_4_12025001 chrX_12025001 RAL-853_125b 4166 chrX 12953847 12953920 chrX 12954035 12954109 20 188 0.0 4.5 2.2 6.2 262 chrX 12953847 intron hec - chrX 12953978 intron hec - chrX 12954109 intron hec - chrX_20_12950001 chrX_12950001 RAL-853_125b 4167 chrX 12977039 12977063 chrX 12977165 12977177 9 125 2.5 13.0 7.8 1.0 138 chrX 12977039 intergenic not near genes chrX 12977108 intergenic not near genes chrX 12977177 intergenic not near genes chrX_9_12975001 chrX_12975001 RAL-853_125b 4168 chrX 12990698 12990761 chrX 12991037 12991100 21 339 6.5 8.0 7.2 2.6 402 chrX 12990698 intron rad + chrX 12990899 intron rad + chrX 12991100 intron rad + chrX_21_12990001 chrX_12990001 RAL-853_125b 4169 chrX 13061305 13061371 chrX 13061466 13061532 16 161 4.5 6.0 5.2 2.6 227 chrX 13061305 intron rad + chrX 13061418 intron rad + chrX 13061532 intron rad + chrX_16_13060001 chrX_13060001 RAL-853_125b 4170 chrX 13062278 13062346 chrX 13062445 13062513 21 167 8.0 6.5 7.2 2.6 235 chrX 13062278 intron rad + chrX 13062396 intron rad + chrX 13062513 intron rad + chrX_21_13060001 chrX_13060001 RAL-853_125b 4171 chrX 13099069 13099114 chrX 13099205 13099257 6 141 0.0 6.5 3.2 1.4 188 chrX 13099069 intron CG43313 - chrX 13099163 intron CG43313 - chrX 13099257 intron CG43313 - chrX_6_13095001 chrX_13095001 RAL-853_125b 4172 chrX 13104029 13104098 chrX 13104167 13104229 12 136 0.0 0.0 0.0 12.0 200 chrX 13104029 intron CG43313 - chrX 13104129 intron CG43313 - chrX 13104229 intron CG43313 - chrX_12_13100001 chrX_13100001 RAL-853_125b 4173 chrX 13146558 13146630 chrX 13146696 13146768 15 138 7.0 5.0 6.0 2.1 210 chrX 13146558 intron CG32645 + chrX 13146663 intron CG32645 + chrX 13146768 intron CG32645 + chrX_15_13145001 chrX_13145001 RAL-853_125b 4174 chrX 13172300 13172376 chrX 13172426 13172492 15 125 8.5 11.0 9.8 1.4 192 chrX 13172300 intron CG34411 - chrX 13172396 intron CG34411 - chrX 13172492 intron CG34411 - chrX_15_13170001 chrX_13170001 RAL-853_125b 4175 chrX 13236833 13236902 chrX 13236965 13237037 20 131 2.0 6.5 4.2 3.8 204 chrX 13236833 intron mew - chrX 13236935 intron mew - chrX 13237037 intron mew - chrX_20_13235001 chrX_13235001 RAL-853_125b 4176 chrX 13278405 13278455 chrX 13278543 13278593 17 134 12.0 6.5 9.2 1.7 188 chrX 13278405 intron HDAC4 - chrX 13278499 intron HDAC4 - chrX 13278593 intron HDAC4 - chrX_17_13275001 chrX_13275001 RAL-853_125b 4177 chrX 13278461 13278479 chrX 13278539 13278612 4 121 8.0 5.5 6.8 0.5 151 chrX 13278461 intron HDAC4 - chrX 13278536 intron HDAC4 - chrX 13278612 intron HDAC4 - chrX_4_13275001 chrX_13275001 RAL-853_125b 4178 chrX 13321426 13321465 chrX 13321580 13321594 4 146 5.5 3.5 4.5 0.7 168 chrX 13321426 intron IP3K2 + chrX 13321510 intron IP3K2 + chrX 13321594 intron IP3K2 + chrX_4_13320001 chrX_13320001 RAL-853_125b 4179 chrX 13347001 13347041 chrX 13347158 13347198 6 157 0.0 10.0 5.0 1.0 197 chrX 13347001 intergenic not near genes chrX 13347100 intergenic not near genes chrX 13347198 intergenic not near genes chrX_6_13345001 chrX_13345001 RAL-853_125b 4180 chrX 13374799 13374808 chrX 13374929 13374938 4 130 12.5 8.5 10.5 0.3 139 chrX 13374799 intron CG1640 + chrX 13374868 intron CG1640 + chrX 13374938 intron CG1640 + chrX_4_13370001 chrX_13370001 RAL-853_125b 4181 chrX 13374809 13374850 chrX 13374928 13374979 14 129 7.5 8.5 8.0 1.6 170 chrX 13374809 intron CG1640 + chrX 13374894 intron CG1640 + chrX 13374979 intron CG1640 + chrX_14_13370001 chrX_13370001 RAL-853_125b 4182 chrX 13401436 13401484 chrX 13401838 13401886 jockey 17 402 3.0 4.5 3.8 3.5 450 chrX 13401436 intergenic CG1673 +,CG12725 - chrX 13401661 intergenic CG12725 -,CG1673 + chrX 13401886 3` UTR CG12725 - chrX_17_13400001 chrX_13400001 RAL-853_125b 4183 chrX 13429411 13429481 chrX 13430610 13430680 jockey 7 1199 0.0 3.5 1.8 2.5 1269 chrX 13429411 intergenic not near genes chrX 13430046 intergenic not near genes chrX 13430680 intergenic not near genes chrX_7_13430001 chrX_13430001 RAL-853_125b 4184 chrX 13463601 13463667 chrX 13469228 13469288 mdg3 13 5627 5.0 7.5 6.2 1.8 5687 chrX 13463601 intron Neto + chrX 13466444 intron Neto + chrX 13469288 intron Neto + chrX_13_13465001 chrX_13465001 RAL-853_125b 4185 chrX 13470143 13470210 chrX 13470485 13470552 22 338 7.5 5.5 6.5 2.9 409 chrX 13470143 intron Neto + chrX 13470348 intron Neto + chrX 13470552 intron Neto + chrX_22_13470001 chrX_13470001 RAL-853_125b 4186 chrX 13471370 13471393 chrX 13471503 13471526 8 130 5.5 18.5 12.0 0.6 156 chrX 13471370 intron Neto + chrX 13471448 intron Neto + chrX 13471526 intron Neto + chrX_8_13470001 chrX_13470001 RAL-853_125b 4187 chrX 13593170 13593183 chrX 13593300 13593313 5 130 2.5 0.0 1.2 2.3 143 chrX 13593170 3` UTR Tango13 + chrX 13593242 intergenic Tango13 +,up - chrX 13593313 intergenic Tango13 +,up - chrX_5_13590001 chrX_13590001 RAL-853_125b 4188 chrX 13734047 13734110 chrX 13734193 13734256 21 141 7.0 11.5 9.2 2.1 209 chrX 13734047 intron g - chrX 13734152 intron g - chrX 13734256 intron g - chrX_21_13730001 chrX_13730001 RAL-853_125b 4189 chrX 13821427 13821470 chrX 13821554 13821597 13 127 1.0 8.0 4.5 2.4 170 chrX 13821427 intron Clic - chrX 13821512 intron Clic - chrX 13821597 intron Clic - chrX_13_13820001 chrX_13820001 RAL-853_125b 4190 chrX 13897063 13897077 chrX 13897193 13897199 roo 5 128 13.5 11.5 12.5 0.4 136 chrX 13897063 intron mamo - chrX 13897131 intron mamo - chrX 13897199 intron mamo - chrX_5_13895001 chrX_13895001 RAL-853_125b 4191 chrX 13908766 13908775 chrX 13908877 13908878 5 116 16.5 14.5 15.5 0.3 112 chrX 13908766 intron mamo - chrX 13908822 intron mamo - chrX 13908878 intron mamo - chrX_5_13905001 chrX_13905001 RAL-853_125b 4192 chrX 13915384 13915455 chrX 13915566 13915631 16 180 4.0 9.5 6.8 2.1 247 chrX 13915384 intron mamo - chrX 13915508 intron mamo - chrX 13915631 intron mamo - chrX_16_13915001 chrX_13915001 RAL-853_125b 4193 chrX 13934252 13934307 chrX 13934384 13934440 7 133 6.0 5.0 5.5 1.1 188 chrX 13934252 intron mamo - chrX 13934346 intron mamo - chrX 13934440 intron mamo - chrX_7_13930001 chrX_13930001 RAL-853_125b 4194 chrX 13935485 13935498 chrX 13935618 13935625 6 132 13.0 10.0 11.5 0.5 140 chrX 13935485 intron mamo - chrX 13935555 intron mamo - chrX 13935625 intron mamo - chrX_6_13935001 chrX_13935001 RAL-853_125b 4195 chrX 13935501 13935519 chrX 13935609 13935652 11 130 9.5 10.0 9.8 1.0 151 chrX 13935501 intron mamo - chrX 13935576 intron mamo - chrX 13935652 intron mamo - chrX_11_13935001 chrX_13935001 RAL-853_125b 4196 chrX 13937936 13937997 chrX 13941257 13941316 I-element 14 3321 3.0 4.0 3.5 3.1 3380 chrX 13937936 intron mamo - chrX 13939626 intron mamo - chrX 13941316 intron mamo - chrX_14_13935001 chrX_13935001 RAL-853_125b 4197 chrX 13943274 13943300 chrX 13943415 13943441 14 140 0.0 13.5 6.8 1.8 167 chrX 13943274 intron mamo - chrX 13943358 intron mamo - chrX 13943441 intron mamo - chrX_14_13940001 chrX_13940001 RAL-853_125b 4198 chrX 13975879 13975894 chrX 13976006 13976017 4 126 0.0 9.5 4.8 0.7 138 chrX 13975879 intron mamo - chrX 13975948 intron mamo - chrX 13976017 intron mamo - chrX_4_13975001 chrX_13975001 RAL-853_125b 4199 chrX 14030711 14030717 chrX 14035339 14035354 copia 4 4635 12.5 7.0 9.8 0.4 4643 chrX 14030711 intergenic not near genes chrX 14033032 intergenic not near genes chrX 14035354 intergenic not near genes chrX_4_14030001 chrX_14030001 RAL-853_125b 4200 chrX 14068391 14068446 chrX 14068574 14068637 24 185 10.0 7.0 8.5 2.5 246 chrX 14068391 intergenic not near genes chrX 14068514 intergenic not near genes chrX 14068637 intergenic not near genes chrX_24_14065001 chrX_14065001 RAL-853_125b 4201 chrX 14104982 14105047 chrX 14114183 14114223 roo 24 9196 8.5 5.5 7.0 3.0 9241 chrX 14104982 intergenic not near genes chrX 14109602 intergenic not near genes chrX 14114223 5` UTR CR44657 + chrX_24_14105001 chrX_14105001 RAL-853_125b 4202 chrX 14167363 14167427 chrX 14167508 14167572 10 145 5.0 9.0 7.0 1.2 209 chrX 14167363 intergenic not near genes chrX 14167468 intergenic not near genes chrX 14167572 intergenic not near genes chrX_10_14165001 chrX_14165001 RAL-853_125b 4203 chrX 14189829 14189895 chrX 14189974 14190016 19 130 7.0 10.0 8.5 2.0 187 chrX 14189829 exon CG11585 + chrX 14189922 exon CG11585 + chrX 14190016 exon CG11585 + chrX_19_14185001 chrX_14185001 RAL-853_125b 4204 chrX 14209413 14209488 chrX 14209554 14209629 25 140 8.0 5.0 6.5 3.3 216 chrX 14209413 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209521 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209629 intron,intron l(1)G0007 +,l(1)G0469 - chrX_25_14205001 chrX_14205001 RAL-853_125b 4205 chrX 14340967 14341044 chrX 14341141 14341218 24 173 3.5 6.5 5.0 4.0 251 chrX 14340967 intron dpr8 + chrX 14341092 intron dpr8 + chrX 14341218 intron dpr8 + chrX_24_14340001 chrX_14340001 RAL-853_125b 4206 chrX 14381363 14381405 chrX 14381567 14381609 11 204 8.0 0.0 4.0 2.2 246 chrX 14381363 intron,3` UTR dpr8 +,betaNACtes4 + chrX 14381486 intron dpr8 + chrX 14381609 intron dpr8 + chrX_11_14380001 chrX_14380001 RAL-853_125b 4207 chrX 14383919 14383940 chrX 14384053 14384074 9 134 11.0 12.0 11.5 0.7 155 chrX 14383919 intron dpr8 + chrX 14383996 intron dpr8 + chrX 14384074 intron dpr8 + chrX_9_14380001 chrX_14380001 RAL-853_125b 4208 chrX 14406610 14406629 chrX 14406760 14406779 9 150 0.0 9.0 4.5 1.6 169 chrX 14406610 intron dpr8 + chrX 14406694 intron dpr8 + chrX 14406779 intron dpr8 + chrX_9_14405001 chrX_14405001 RAL-853_125b 4209 chrX 14407227 14407258 chrX 14407359 14407390 6 132 7.5 0.0 3.8 1.2 163 chrX 14407227 intron dpr8 + chrX 14407308 intron dpr8 + chrX 14407390 intron dpr8 + chrX_6_14405001 chrX_14405001 RAL-853_125b 4210 chrX 14411221 14411284 chrX 14411349 14411412 24 127 8.5 5.5 7.0 3.0 191 chrX 14411221 intron dpr8 + chrX 14411316 intron dpr8 + chrX 14411412 intron dpr8 + chrX_24_14410001 chrX_14410001 RAL-853_125b 4211 chrX 14416271 14416324 chrX 14421088 14421141 F-element 13 4817 6.0 6.0 6.0 1.9 4870 chrX 14416271 intron dpr8 + chrX 14418706 intron dpr8 + chrX 14421141 intron dpr8 + chrX_13_14415001 chrX_14415001 RAL-853_125b 4212 chrX 14484933 14484982 chrX 14485056 14485121 14 138 0.0 2.5 1.2 6.4 188 chrX 14484933 intergenic not near genes chrX 14485027 intergenic not near genes chrX 14485121 intergenic not near genes chrX_14_14485001 chrX_14485001 RAL-853_125b 4213 chrX 14531323 14531386 chrX 14531462 14531525 21 139 8.5 6.0 7.2 2.6 202 chrX 14531323 intergenic not near genes chrX 14531424 intergenic not near genes chrX 14531525 intergenic not near genes chrX_21_14530001 chrX_14530001 RAL-853_125b 4214 chrX 14572842 14572907 chrX 14572980 14573024 21 132 5.5 11.0 8.2 2.3 182 chrX 14572842 intergenic not near genes chrX 14572933 intergenic not near genes chrX 14573024 intergenic not near genes chrX_21_14570001 chrX_14570001 RAL-853_125b 4215 chrX 14593752 14593822 chrX 14593884 14593954 12 132 3.5 2.0 2.8 3.2 202 chrX 14593752 intron CG9413 - chrX 14593853 intron CG9413 - chrX 14593954 intron CG9413 - chrX_12_14590001 chrX_14590001 RAL-853_125b 4216 chrX 14597686 14597697 chrX 14597813 14597824 5 127 20.0 7.0 13.5 0.3 138 chrX 14597686 intron CG9413 - chrX 14597755 intron CG9413 - chrX 14597824 intron CG9413 - chrX_5_14595001 chrX_14595001 RAL-853_125b 4217 chrX 14597700 14597748 chrX 14597811 14597875 23 126 8.5 6.5 7.5 2.7 175 chrX 14597700 intron CG9413 - chrX 14597788 intron CG9413 - chrX 14597875 intron CG9413 - chrX_23_14595001 chrX_14595001 RAL-853_125b 4218 chrX 14636421 14636469 chrX 14641912 14641954 I-element 18 5489 9.0 9.0 9.0 1.8 5533 chrX 14636421 intron NetA - chrX 14639188 intron NetA - chrX 14641954 intron NetA - chrX_18_14635001 chrX_14635001 RAL-853_125b 4219 chrX 14713993 14714060 chrX 14714125 14714192 23 132 7.0 7.5 7.2 2.8 199 chrX 14713993 intron NetB - chrX 14714092 intron NetB - chrX 14714192 intron NetB - chrX_23_14710001 chrX_14710001 RAL-853_125b 4220 chrX 14767900 14767956 chrX 14768027 14768080 16 129 6.5 0.5 3.5 3.6 180 chrX 14767900 intergenic not near genes chrX 14767990 intergenic not near genes chrX 14768080 intergenic not near genes chrX_16_14765001 chrX_14765001 RAL-853_125b 4221 chrX 14777992 14778049 chrX 14782839 14782896 Doc 24 4847 8.5 7.0 7.8 2.7 4904 chrX 14777992 intergenic CG5347 + chrX 14780444 intergenic not near genes chrX 14782896 intergenic Ag5r2 - chrX_24_14780001 chrX_14780001 RAL-853_125b 4222 chrX 14810166 14810169 chrX 14810294 14810297 4 128 6.5 17.0 11.8 0.3 131 chrX 14810166 intron rut - chrX 14810232 intron rut - chrX 14810297 intron rut - chrX_4_14810001 chrX_14810001 RAL-853_125b 4223 chrX 14813686 14813759 chrX 14813814 14813887 17 128 9.5 4.0 6.8 2.2 201 chrX 14813686 intron rut - chrX 14813786 intron rut - chrX 14813887 intron rut - chrX_17_14810001 chrX_14810001 RAL-853_125b 4224 chrX 14818717 14818789 chrX 14823970 14824013 copia 22 5250 7.0 7.0 7.0 2.8 5296 chrX 14818717 intron rut - chrX 14821365 intron rut - chrX 14824013 intron rut - chrX_22_14820001 chrX_14820001 RAL-853_125b 4225 chrX 14936817 14936883 chrX 14946124 14946190 roo 21 9307 4.5 4.0 4.2 4.0 9373 chrX 14936817 intron pdgy - chrX 14941504 intron pdgy - chrX 14946190 intron pdgy - chrX_21_14940001 chrX_14940001 RAL-853_125b 4226 chrX 14968029 14968101 chrX 14968158 14968230 18 129 0.5 6.5 3.5 4.0 201 chrX 14968029 intron eag + chrX 14968130 intron eag + chrX 14968230 intron eag + chrX_18_14965001 chrX_14965001 RAL-853_125b 4227 chrX 14981683 14981738 chrX 14981812 14981867 9 129 6.0 7.5 6.8 1.2 184 chrX 14981683 intron eag + chrX 14981775 intron eag + chrX 14981867 intron eag + chrX_9_14980001 chrX_14980001 RAL-853_125b 4228 chrX 15059125 15059198 chrX 15059281 15059354 7 156 5.5 4.0 4.8 1.2 229 chrX 15059125 exon hiw - chrX 15059240 intron hiw - chrX 15059354 exon hiw - chrX_7_15055001 chrX_15055001 RAL-853_125b 4229 chrX 15200594 15200637 chrX 15200720 15200763 12 126 6.0 3.0 4.5 2.2 169 chrX 15200594 intergenic not near genes chrX 15200678 intergenic not near genes chrX 15200763 intergenic not near genes chrX_12_15200001 chrX_15200001 RAL-853_125b 4230 chrX 15273669 15273716 chrX 15274886 15274932 1360 16 1215 12.0 9.5 10.8 1.4 1263 chrX 15273669 intergenic not near genes chrX 15274300 intergenic not near genes chrX 15274932 intergenic not near genes chrX_16_15270001 chrX_15270001 RAL-853_125b 4231 chrX 15277596 15277604 chrX 15277731 15277739 5 135 15.5 5.5 10.5 0.4 143 chrX 15277596 intergenic not near genes chrX 15277668 intergenic not near genes chrX 15277739 intergenic not near genes chrX_5_15275001 chrX_15275001 RAL-853_125b 4232 chrX 15277609 15277664 chrX 15277728 15277798 12 133 6.5 5.0 5.8 1.8 189 chrX 15277609 intergenic not near genes chrX 15277704 intergenic not near genes chrX 15277798 intergenic not near genes chrX_12_15275001 chrX_15275001 RAL-853_125b 4233 chrX 15326692 15326709 chrX 15326940 15326957 I-element 6 248 0.5 2.0 1.2 2.7 265 chrX 15326692 3` UTR Top1 + chrX 15326824 3` UTR Top1 + chrX 15326957 3` UTR Top1 + chrX_6_15325001 chrX_15325001 RAL-853_125b 4234 chrX 15413009 15413070 chrX 15417361 15417422 Juan 27 4349 8.5 6.5 7.5 3.2 4413 chrX 15413009 intron Cngl - chrX 15415216 intron Cngl - chrX 15417422 intron Cngl - chrX_27_15415001 chrX_15415001 RAL-853_125b 4235 chrX 15421871 15421945 chrX 15423432 15423506 pogo 13 1560 6.0 4.5 5.2 2.1 1635 chrX 15421871 intron Cngl - chrX 15422688 intron Cngl - chrX 15423506 intron Cngl - chrX_13_15420001 chrX_15420001 RAL-853_125b 4236 chrX 15435687 15435696 chrX 15436170 15436179 rover 5 483 0.0 15.5 7.8 0.6 492 chrX 15435687 intron Cngl - chrX 15435933 intron Cngl - chrX 15436179 intron Cngl - chrX_5_15435001 chrX_15435001 RAL-853_125b 4237 chrX 15506515 15506548 chrX 15506642 15506676 9 125 15.0 10.0 12.5 0.7 161 chrX 15506515 intron Gmap + chrX 15506596 intron Gmap + chrX 15506676 intron Gmap + chrX_9_15505001 chrX_15505001 RAL-853_125b 4238 chrX 15506549 15506577 chrX 15506640 15506705 6 114 12.0 12.0 12.0 0.5 156 chrX 15506549 intron Gmap + chrX 15506627 intron Gmap + chrX 15506705 intron Gmap + chrX_6_15505001 chrX_15505001 RAL-853_125b 4239 chrX 15536654 15536662 chrX 15536781 15536789 4 127 23.5 19.5 21.5 0.2 135 chrX 15536654 intron Ac13E - chrX 15536722 intron Ac13E - chrX 15536789 intron Ac13E - chrX_4_15535001 chrX_15535001 RAL-853_125b 4240 chrX 15536670 15536701 chrX 15536777 15536821 16 122 20.5 20.5 20.5 0.7 151 chrX 15536670 intron Ac13E - chrX 15536746 intron Ac13E - chrX 15536821 intron Ac13E - chrX_16_15535001 chrX_15535001 RAL-853_125b 4241 chrX 15666165 15666229 chrX 15666292 15666356 24 123 6.0 7.5 6.8 3.1 191 chrX 15666165 intergenic CR43299 - chrX 15666260 intergenic not near genes chrX 15666356 intergenic not near genes chrX_24_15665001 chrX_15665001 RAL-853_125b 4242 chrX 15671151 15671208 chrX 15671288 15671340 12 136 3.5 0.5 2.0 4.0 189 chrX 15671151 intergenic CG15646 - chrX 15671246 intergenic CG15646 - chrX 15671340 intergenic CG15646 - chrX_12_15670001 chrX_15670001 RAL-853_125b 4243 chrX 15677992 15678058 chrX 15678115 15678185 17 126 8.5 9.5 9.0 1.7 193 chrX 15677992 intergenic CG12708 + chrX 15678088 intergenic CG12708 + chrX 15678185 intergenic CG12708 + chrX_17_15675001 chrX_15675001 RAL-853_125b 4244 chrX 15726360 15726373 chrX 15726493 15726506 5 130 24.5 5.5 15.0 0.3 146 chrX 15726360 exon CG8184 + chrX 15726433 exon CG8184 + chrX 15726506 intron CG8184 + chrX_5_15725001 chrX_15725001 RAL-853_125b 4245 chrX 15726375 15726424 chrX 15726488 15726553 18 130 14.5 5.0 9.8 1.7 178 chrX 15726375 exon CG8184 + chrX 15726464 intron CG8184 + chrX 15726553 exon CG8184 + chrX_18_15725001 chrX_15725001 RAL-853_125b 4246 chrX 15745090 15745157 chrX 15745219 15745286 23 128 8.5 7.5 8.0 2.6 196 chrX 15745090 exon CG8944 - chrX 15745188 intron CG8944 - chrX 15745286 intron CG8944 - chrX_23_15745001 chrX_15745001 RAL-853_125b 4247 chrX 15818728 15818805 chrX 15818854 15818876 35 120 10.5 13.5 12.0 2.7 148 chrX 15818728 intron sd + chrX 15818802 intron sd + chrX 15818876 intron sd + chrX_35_15815001 chrX_15815001 RAL-853_125b 4248 chrX 16074104 16074164 chrX 16074490 16074549 23 386 0.0 8.0 4.0 4.6 445 chrX 16074104 intergenic not near genes chrX 16074326 intergenic Tob - chrX 16074549 intergenic Tob - chrX_23_16070001 chrX_16070001 RAL-853_125b 4249 chrX 16100507 16100586 chrX 16100636 16100716 18 130 5.5 7.0 6.2 2.5 209 chrX 16100507 intron,intron CG42353 -,CG42354 - chrX 16100612 intron,intron CG42353 -,CG42354 - chrX 16100716 intron,intron CG42353 -,CG42354 - chrX_18_16100001 chrX_16100001 RAL-853_125b 4250 chrX 16160251 16160303 chrX 16160377 16160429 15 126 9.5 3.5 6.5 2.0 178 chrX 16160251 intergenic not near genes chrX 16160340 intergenic not near genes chrX 16160429 intergenic not near genes chrX_15_16160001 chrX_16160001 RAL-853_125b 4251 chrX 16171570 16171645 chrX 16171704 16171772 7 132 0.0 6.5 3.2 1.7 202 chrX 16171570 intergenic not near genes chrX 16171671 intergenic not near genes chrX 16171772 intergenic not near genes chrX_7_16170001 chrX_16170001 RAL-853_125b 4252 chrX 16222749 16222806 chrX 16231149 16231206 roo 14 8400 4.0 8.0 6.0 2.0 8457 chrX 16222749 intergenic not near genes chrX 16226978 intergenic not near genes chrX 16231206 intergenic not near genes chrX_14_16225001 chrX_16225001 RAL-853_125b 4253 chrX 16253823 16253852 chrX 16253960 16253989 6 137 0.0 7.5 3.8 1.2 166 chrX 16253823 intergenic snRNA:U5:14B - chrX 16253906 intergenic snRNA:U5:14B - chrX 16253989 intergenic snRNA:U5:14B - chrX_6_16250001 chrX_16250001 RAL-853_125b 4254 chrX 16295486 16295553 chrX 16295620 16295681 9 131 6.0 0.0 3.0 2.2 195 chrX 16295486 intron CG9911 - chrX 16295584 intron CG9911 - chrX 16295681 intron CG9911 - chrX_9_16295001 chrX_16295001 RAL-853_125b 4255 chrX 16329360 16329447 chrX 16329507 16329568 19 135 0.0 4.5 2.2 5.9 208 chrX 16329360 exon CG9919 - chrX 16329464 intron CG9919 - chrX 16329568 exon CG9919 - chrX_19_16325001 chrX_16325001 RAL-853_125b 4256 chrX 16340617 16340659 chrX 16349822 16349859 roo 16 9205 3.0 4.5 3.8 3.3 9242 chrX 16340617 3` UTR Dsp1 + chrX 16345238 intergenic not near genes chrX 16349859 intergenic sl + chrX_16_16345001 chrX_16345001 RAL-853_125b 4257 chrX 16404308 16404375 chrX 16404454 16404521 17 146 8.0 7.5 7.8 1.9 213 chrX 16404308 intron CG9981 - chrX 16404414 intron CG9981 - chrX 16404521 5` UTR CG9981 - chrX_17_16400001 chrX_16400001 RAL-853_125b 4258 chrX 16492600 16492665 chrX 16498227 16498292 mdg3 21 5627 9.0 10.0 9.5 2.0 5692 chrX 16492600 intron para - chrX 16495446 intron para - chrX 16498292 exon para - chrX_21_16495001 chrX_16495001 RAL-853_125b 4259 chrX 16689582 16689652 chrX 16689718 16689788 20 129 7.0 8.5 7.8 2.3 206 chrX 16689582 intron Sep4 - chrX 16689685 intron Sep4 - chrX 16689788 intron Sep4 - chrX_20_16685001 chrX_16685001 RAL-853_125b 4260 chrX 16707957 16707977 chrX 16708141 16708161 7 184 0.0 9.5 4.8 1.2 204 chrX 16707957 intron CG4678 + chrX 16708059 intron CG4678 + chrX 16708161 exon CG4678 + chrX_7_16705001 chrX_16705001 RAL-853_125b 4261 chrX 16762561 16762595 chrX 16762760 16762794 19 199 6.0 4.0 5.0 3.2 233 chrX 16762561 intron if - chrX 16762678 intron if - chrX 16762794 intron if - chrX_19_16760001 chrX_16760001 RAL-853_125b 4262 chrX 16764687 16764704 chrX 16764814 16764831 5 127 12.0 0.0 6.0 0.7 144 chrX 16764687 intron if - chrX 16764759 intron if - chrX 16764831 intron if - chrX_5_16760001 chrX_16760001 RAL-853_125b 4263 chrX 16815333 16815383 chrX 16815459 16815509 9 126 3.0 8.0 5.5 1.4 176 chrX 16815333 intron CG4829 + chrX 16815421 intron CG4829 + chrX 16815509 intron,3` UTR CG4829 +,CR44129 - chrX_9_16815001 chrX_16815001 RAL-853_125b 4264 chrX 16821187 16821259 chrX 16821317 16821389 8 129 6.5 0.0 3.2 1.9 202 chrX 16821187 intron CG4829 + chrX 16821288 intron CG4829 + chrX 16821389 intron CG4829 + chrX_8_16820001 chrX_16820001 RAL-853_125b 4265 chrX 16869645 16869672 chrX 16869778 16869805 5 129 6.0 9.0 7.5 0.6 160 chrX 16869645 intron CG13003 - chrX 16869725 intron CG13003 - chrX 16869805 intron CG13003 - chrX_5_16865001 chrX_16865001 RAL-853_125b 4266 chrX 16870032 16870091 chrX 16870164 16870224 12 132 6.0 6.5 6.2 1.7 192 chrX 16870032 intron CG13003 - chrX 16870128 intron CG13003 - chrX 16870224 intron CG13003 - chrX_12_16870001 chrX_16870001 RAL-853_125b 4267 chrX 16873990 16874008 chrX 16874116 16874134 4 126 2.0 5.0 3.5 0.9 144 chrX 16873990 intron CG13003 - chrX 16874062 intron CG13003 - chrX 16874134 intron CG13003 - chrX_4_16870001 chrX_16870001 RAL-853_125b 4268 chrX 16880118 16880154 chrX 16880259 16880295 6 141 14.0 14.0 14.0 0.4 177 chrX 16880118 intergenic not near genes chrX 16880206 intergenic not near genes chrX 16880295 intergenic not near genes chrX_6_16880001 chrX_16880001 RAL-853_125b 4269 chrX 16935969 16936026 chrX 16936437 16936494 jockey 14 468 5.5 7.0 6.2 1.9 525 chrX 16935969 intron CG4928 + chrX 16936232 intron CG4928 + chrX 16936494 intron CG4928 + chrX_14_16935001 chrX_16935001 RAL-853_125b 4270 chrX 16951294 16951351 chrX 16951418 16951473 27 119 8.5 11.0 9.8 2.5 179 chrX 16951294 exon RhoGAP15B + chrX 16951384 exon RhoGAP15B + chrX 16951473 exon RhoGAP15B + chrX_27_16950001 chrX_16950001 RAL-853_125b 4271 chrX 16983076 16983076 chrX 19404963 19404965 5 2421888 30.0 17.5 23.8 0.2 2421889 chrX 16983076 intron CG45002 - chrX 18194020 intron Frq2 + chrX 19404965 intron kek5 + chrX_5_18190001 chrX_18190001 RAL-853_125b 4272 chrX 16983077 16983077 chrX 19404963 19404963 4 2421886 29.5 17.5 23.5 0.2 2421886 chrX 16983077 intron CG45002 - chrX 18194020 intron Frq2 + chrX 19404963 intron kek5 + chrX_4_18190001 chrX_18190001 RAL-853_125b 4273 chrX 17011920 17011992 chrX 17012053 17012104 19 131 9.0 6.5 7.8 2.2 184 chrX 17011920 intron CG45002 - chrX 17012012 intron CG45002 - chrX 17012104 intron CG45002 - chrX_19_17010001 chrX_17010001 RAL-853_125b 4274 chrX 17063145 17063205 chrX 17063282 17063342 23 137 6.0 8.0 7.0 2.9 197 chrX 17063145 intron CG45002 - chrX 17063244 intron CG45002 - chrX 17063342 intron CG45002 - chrX_23_17060001 chrX_17060001 RAL-853_125b 4275 chrX 17110077 17110329 chrX 17110205 17110501 13 156 0.0 0.0 0.0 13.0 424 chrX 17110077 intron CG5004 + chrX 17110289 intron CG5004 + chrX 17110501 intron CG5004 + chrX_13_17110001 chrX_17110001 RAL-853_125b 4276 chrX 17195166 17195223 chrX 17200302 17200359 flea 16 5136 11.0 10.5 10.8 1.4 5193 chrX 17195166 3` UTR baz + chrX 17197762 3` UTR baz + chrX 17200359 3` UTR baz + chrX_16_17195001 chrX_17195001 RAL-853_125b 4277 chrX 17205807 17205857 chrX 17205947 17205997 16 140 6.5 8.5 7.5 1.9 190 chrX 17205807 intergenic not near genes chrX 17205902 intergenic not near genes chrX 17205997 intergenic CG32564 + chrX_16_17205001 chrX_17205001 RAL-853_125b 4278 chrX 17229909 17229963 chrX 17230062 17230116 20 153 7.5 3.5 5.5 3.1 207 chrX 17229909 intergenic CG10597 - chrX 17230012 intergenic CG10597 - chrX 17230116 intergenic CG10597 - chrX_20_17230001 chrX_17230001 RAL-853_125b 4279 chrX 17262136 17262177 chrX 17262272 17262313 10 136 7.5 10.0 8.8 1.0 177 chrX 17262136 intron f + chrX 17262224 intron f + chrX 17262313 intron f + chrX_10_17260001 chrX_17260001 RAL-853_125b 4280 chrX 17282831 17282885 chrX 17282959 17282978 15 121 11.5 0.5 6.0 2.1 147 chrX 17282831 5` UTR CG5445 + chrX 17282904 5` UTR CG5445 + chrX 17282978 intron CG5445 + chrX_15_17280001 chrX_17280001 RAL-853_125b 4281 chrX 17303558 17303601 chrX 17303684 17303727 13 126 8.0 9.0 8.5 1.4 169 chrX 17303558 intron CG5445 + chrX 17303642 intron CG5445 + chrX 17303727 intron CG5445 + chrX_13_17300001 chrX_17300001 RAL-853_125b 4282 chrX 17316333 17316358 chrX 17316467 17316492 10 134 8.5 0.0 4.2 1.9 159 chrX 17316333 intron B-H2 + chrX 17316412 intron B-H2 + chrX 17316492 intron B-H2 + chrX_10_17315001 chrX_17315001 RAL-853_125b 4283 chrX 17352550 17352616 chrX 17352694 17352769 28 148 0.0 9.5 4.8 4.8 219 chrX 17352550 intergenic not near genes chrX 17352660 intergenic not near genes chrX 17352769 intergenic not near genes chrX_28_17350001 chrX_17350001 RAL-853_125b 4284 chrX 17355485 17355520 chrX 17355633 17355669 9 149 5.0 8.0 6.5 1.2 184 chrX 17355485 intergenic not near genes chrX 17355577 intergenic not near genes chrX 17355669 intergenic not near genes chrX_9_17355001 chrX_17355001 RAL-853_125b 4285 chrX 17431316 17431335 chrX 17431704 17431726 jockey 8 391 19.5 7.5 13.5 0.6 410 chrX 17431316 intron CG12994 - chrX 17431521 intron CG12994 - chrX 17431726 intron CG12994 - chrX_8_17430001 chrX_17430001 RAL-853_125b 4286 chrX 17434397 17434443 chrX 17434540 17434585 5 143 3.5 0.0 1.8 1.8 188 chrX 17434397 intron CG12994 - chrX 17434491 intron CG12994 - chrX 17434585 intron CG12994 - chrX_5_17430001 chrX_17430001 RAL-853_125b 4287 chrX 17443072 17443094 chrX 17443246 17443268 8 174 9.0 6.5 7.8 0.9 196 chrX 17443072 intron CG12994 - chrX 17443170 intron CG12994 - chrX 17443268 intron CG12994 - chrX_8_17440001 chrX_17440001 RAL-853_125b 4288 chrX 17479902 17479935 chrX 17480013 17480059 11 119 11.0 11.5 11.2 0.9 157 chrX 17479902 intron CG43658 - chrX 17479980 intron CG43658 - chrX 17480059 intron CG43658 - chrX_11_17475001 chrX_17475001 RAL-853_125b 4289 chrX 17502301 17502318 chrX 17502431 17502448 8 130 11.0 9.5 10.2 0.7 147 chrX 17502301 intron CG43658 - chrX 17502374 intron CG43658 - chrX 17502448 intron CG43658 - chrX_8_17500001 chrX_17500001 RAL-853_125b 4290 chrX 17502319 17502368 chrX 17502429 17502498 20 126 7.0 9.0 8.0 2.2 179 chrX 17502319 intron CG43658 - chrX 17502408 intron CG43658 - chrX 17502498 intron CG43658 - chrX_20_17500001 chrX_17500001 RAL-853_125b 4291 chrX 17657051 17657118 chrX 17657181 17657248 21 130 3.0 3.0 3.0 5.2 197 chrX 17657051 intergenic IntS2 -,beta-Spec + chrX 17657150 intergenic beta-Spec +,IntS2 - chrX 17657248 intergenic beta-Spec +,IntS2 - chrX_21_17655001 chrX_17655001 RAL-853_125b 4292 chrX 17708783 17708850 chrX 17708910 17708979 13 127 9.5 6.5 8.0 1.4 196 chrX 17708783 intron CG8173 - chrX 17708881 intron CG8173 - chrX 17708979 intron CG8173 - chrX_13_17705001 chrX_17705001 RAL-853_125b 4293 chrX 17740332 17740339 chrX 17740459 17740466 4 126 15.5 7.0 11.2 0.3 134 chrX 17740332 intron CG42684 + chrX 17740399 intron CG42684 + chrX 17740466 intron CG42684 + chrX_4_17740001 chrX_17740001 RAL-853_125b 4294 chrX 17740343 17740363 chrX 17740457 17740490 10 122 12.0 6.5 9.2 1.0 147 chrX 17740343 intron CG42684 + chrX 17740416 intron CG42684 + chrX 17740490 intron CG42684 + chrX_10_17740001 chrX_17740001 RAL-853_125b 4295 chrX 17740366 17740399 chrX 17740453 17740526 16 115 8.0 6.0 7.0 2.0 160 chrX 17740366 intron CG42684 + chrX 17740446 intron CG42684 + chrX 17740526 intron CG42684 + chrX_16_17740001 chrX_17740001 RAL-853_125b 4296 chrX 17759631 17759662 chrX 17759760 17759791 6 128 8.5 4.5 6.5 0.8 160 chrX 17759631 intergenic not near genes chrX 17759711 intergenic not near genes chrX 17759791 intergenic not near genes chrX_6_17755001 chrX_17755001 RAL-853_125b 4297 chrX 17766333 17766370 chrX 17766464 17766518 13 144 7.0 1.5 4.2 2.5 185 chrX 17766333 intergenic not near genes chrX 17766426 intergenic not near genes chrX 17766518 intergenic not near genes chrX_13_17765001 chrX_17765001 RAL-853_125b 4298 chrX 17784451 17784487 chrX 17784577 17784613 5 126 2.0 8.0 5.0 0.8 162 chrX 17784451 intergenic not near genes chrX 17784532 intergenic not near genes chrX 17784613 intergenic not near genes chrX_5_17780001 chrX_17780001 RAL-853_125b 4299 chrX 17792928 17792972 chrX 17796251 17796320 flea 17 3344 9.0 5.0 7.0 2.1 3392 chrX 17792928 intron OdsH + chrX 17794624 intron OdsH + chrX 17796320 intron OdsH + chrX_17_17790001 chrX_17790001 RAL-853_125b 4300 chrX 17846232 17846307 chrX 17846366 17846439 31 133 9.5 11.5 10.5 2.7 207 chrX 17846232 intron Ucp4A + chrX 17846336 intron Ucp4A + chrX 17846439 intron Ucp4A + chrX_31_17845001 chrX_17845001 RAL-853_125b 4301 chrX 18033621 18033657 chrX 18033953 18033962 5 322 14.5 0.0 7.2 0.6 341 chrX 18033621 intron Sh - chrX 18033792 intron Sh - chrX 18033962 intron Sh - chrX_5_18030001 chrX_18030001 RAL-853_125b 4302 chrX 18194032 18194095 chrX 18194617 18194680 BS 39 585 8.0 9.5 8.8 4.0 648 chrX 18194032 intron Frq2 + chrX 18194356 intron Frq2 + chrX 18194680 intron Frq2 + chrX_39_18190001 chrX_18190001 RAL-853_125b 4303 chrX 18337389 18337449 chrX 18337539 18337599 18 150 6.0 9.5 7.8 2.0 210 chrX 18337389 intron CG6123 - chrX 18337494 intron CG6123 - chrX 18337599 intron CG6123 - chrX_18_18335001 chrX_18335001 RAL-853_125b 4304 chrX 18427332 18427409 chrX 18427793 18427870 25 460 5.5 5.0 5.2 4.0 538 chrX 18427332 intergenic CG42323 + chrX 18427601 intergenic not near genes chrX 18427870 intergenic not near genes chrX_25_18425001 chrX_18425001 RAL-853_125b 4305 chrX 18429455 18429513 chrX 18434816 18434874 Transpac 16 5361 9.0 8.0 8.5 1.7 5419 chrX 18429455 intergenic not near genes chrX 18432164 intergenic not near genes chrX 18434874 intergenic not near genes chrX_16_18430001 chrX_18430001 RAL-853_125b 4306 chrX 18479851 18479868 chrX 18479988 18480000 9 136 4.0 11.0 7.5 1.1 149 chrX 18479851 intergenic Hayan -,CR45714 +,CG32547 - chrX 18479926 intergenic Hayan -,CR45714 +,CG32547 - chrX 18480000 3` UTR Hayan - chrX_9_18475001 chrX_18475001 RAL-853_125b 4307 chrX 18489995 18490057 chrX 18490199 18490240 32 202 3.5 3.0 3.2 7.6 245 chrX 18489995 intergenic CG15046 - chrX 18490118 intergenic CG15046 - chrX 18490240 intergenic not near genes chrX_32_18490001 chrX_18490001 RAL-853_125b 4308 chrX 18500872 18500938 chrX 18502840 18502906 18 1966 32.0 39.0 35.5 0.5 2034 chrX 18500872 exon Rad51D + chrX 18501889 exon Wnt5 - chrX 18502906 exon Wnt5 - chrX_18_18500001 chrX_18500001 RAL-853_125b 4309 chrX 18500946 18500950 chrX 18502839 18502909 5 1922 27.5 39.0 33.2 0.1 1963 chrX 18500946 3` UTR Rad51D + chrX 18501928 exon Wnt5 - chrX 18502909 exon Wnt5 - chrX_5_18500001 chrX_18500001 RAL-853_125b 4310 chrX 18524304 18524368 chrX 18524433 18524497 15 129 10.5 8.5 9.5 1.4 193 chrX 18524304 intron Bx + chrX 18524400 intron Bx + chrX 18524497 intron Bx + chrX_15_18520001 chrX_18520001 RAL-853_125b 4311 chrX 18529347 18529391 chrX 18529473 18529517 16 126 4.5 5.5 5.0 2.7 170 chrX 18529347 intron,3` UTR Bx +,CG15047 + chrX 18529432 intron,3` UTR Bx +,CG15047 + chrX 18529517 intron,3` UTR Bx +,CG15047 + chrX_16_18525001 chrX_18525001 RAL-853_125b 4312 chrX 18644974 18645000 chrX 18645122 18645148 12 148 15.5 11.5 13.5 0.8 174 chrX 18644974 intron Rip11 - chrX 18645061 intron Rip11 - chrX 18645148 intron Rip11 - chrX_12_18645001 chrX_18645001 RAL-853_125b 4313 chrX 18645002 18645042 chrX 18645120 18645190 17 146 5.5 11.0 8.2 1.8 188 chrX 18645002 intron Rip11 - chrX 18645096 intron Rip11 - chrX 18645190 intron Rip11 - chrX_17_18645001 chrX_18645001 RAL-853_125b 4314 chrX 18698797 18698878 chrX 18698964 18699045 24 165 3.5 5.5 4.5 4.4 248 chrX 18698797 intergenic not near genes chrX 18698921 intergenic not near genes chrX 18699045 intergenic not near genes chrX_24_18695001 chrX_18695001 RAL-853_125b 4315 chrX 18749573 18749646 chrX 18749707 18749745 26 132 3.0 6.5 4.8 4.5 172 chrX 18749573 intergenic not near genes chrX 18749659 intergenic not near genes chrX 18749745 intergenic not near genes chrX_26_18745001 chrX_18745001 RAL-853_125b 4316 chrX 18754302 18754345 chrX 18758007 18758060 297 9 3713 4.0 8.5 6.2 1.2 3758 chrX 18754302 intergenic not near genes chrX 18756181 intergenic not near genes chrX 18758060 intergenic not near genes chrX_9_18755001 chrX_18755001 RAL-853_125b 4317 chrX 18768959 18769052 chrX 18772369 18772432 17 3398 10.0 38.0 24.0 0.7 3473 chrX 18768959 intron CCKLR-17D3 - chrX 18770696 intron CCKLR-17D3 - chrX 18772432 intron CCKLR-17D3 - chrX_17_18770001 chrX_18770001 RAL-853_125b 4318 chrX 18768230 18768266 chrX 18772504 18772540 11 4274 33.0 48.0 40.5 0.3 4310 chrX 18768230 intron CCKLR-17D3 - chrX 18770385 intron CCKLR-17D3 - chrX 18772540 intron CCKLR-17D3 - chrX_11_18770001 chrX_18770001 RAL-853_125b 4319 chrX 18774397 18774472 chrX 18774532 18774607 25 135 7.5 4.0 5.8 3.7 210 chrX 18774397 intergenic CCKLR-17D3 - chrX 18774502 intergenic CCKLR-17D3 - chrX 18774607 intergenic not near genes chrX_25_18770001 chrX_18770001 RAL-853_125b 4320 chrX 18832225 18832288 chrX 18832367 18832430 20 142 4.5 8.0 6.2 2.8 205 chrX 18832225 intergenic CG7101 +,Pvf1 + chrX 18832328 intergenic CG7101 +,Pvf1 + chrX 18832430 intergenic Pvf1 +,CG7101 + chrX_20_18830001 chrX_18830001 RAL-853_125b 4321 chrX 18896470 18896546 chrX 18896631 18896707 11 161 3.0 6.5 4.8 1.9 237 chrX 18896470 3` UTR CG7349 + chrX 18896588 intergenic CG7349 + chrX 18896707 intergenic CG7349 + chrX_11_18895001 chrX_18895001 RAL-853_125b 4322 chrX 18957031 18957093 chrX 18965744 18965806 roo 11 8713 5.0 3.0 4.0 2.2 8775 chrX 18957031 intron CG43759 + chrX 18961418 intron CG43759 + chrX 18965806 intron CG43759 + chrX_11_18960001 chrX_18960001 RAL-853_125b 4323 chrX 19060373 19060427 chrX 19065207 19065261 Doc 13 4834 7.0 9.5 8.2 1.4 4888 chrX 19060373 intron CG14190 + chrX 19062817 intron CG14190 + chrX 19065261 intron CG14190 + chrX_13_19060001 chrX_19060001 RAL-853_125b 4324 chrX 19073638 19073694 chrX 19073775 19073831 11 137 8.0 4.5 6.2 1.5 193 chrX 19073638 intergenic not near genes chrX 19073734 intergenic not near genes chrX 19073831 intergenic not near genes chrX_11_19070001 chrX_19070001 RAL-853_125b 4325 chrX 19084042 19084106 chrX 19084212 19084276 17 170 7.0 5.0 6.0 2.4 234 chrX 19084042 intergenic CR45503 + chrX 19084159 intergenic CR45503 + chrX 19084276 intergenic CR45503 + chrX_17_19080001 chrX_19080001 RAL-853_125b 4326 chrX 19099955 19099970 chrX 19100087 19100102 8 132 10.5 22.5 16.5 0.5 147 chrX 19099955 intergenic not near genes chrX 19100028 intergenic not near genes chrX 19100102 intergenic not near genes chrX_8_19100001 chrX_19100001 RAL-853_125b 4327 chrX 19106779 19106796 chrX 19106905 19106922 10 125 15.0 5.0 10.0 0.9 143 chrX 19106779 intergenic not near genes chrX 19106850 intergenic not near genes chrX 19106922 intergenic not near genes chrX_10_19105001 chrX_19105001 RAL-853_125b 4328 chrX 19110489 19110497 chrX 19110685 19110712 5 212 10.0 11.0 10.5 0.4 223 chrX 19110489 intergenic not near genes chrX 19110600 intergenic not near genes chrX 19110712 intergenic not near genes chrX_5_19110001 chrX_19110001 RAL-853_125b 4329 chrX 19119653 19119679 chrX 19119789 19119815 4 136 5.0 0.0 2.5 1.1 162 chrX 19119653 intergenic not near genes chrX 19119734 intergenic not near genes chrX 19119815 intergenic not near genes chrX_4_19115001 chrX_19115001 RAL-853_125b 4330 chrX 19125630 19125688 chrX 19125764 19125822 33 133 13.5 7.0 10.2 2.9 192 chrX 19125630 exon tgy - chrX 19125726 intron tgy - chrX 19125822 intron tgy - chrX_33_19125001 chrX_19125001 RAL-853_125b 4331 chrX 19136507 19136564 chrX 19143477 19143508 412 18 6967 9.5 0.5 5.0 3.0 7001 chrX 19136507 intergenic not near genes chrX 19140008 intergenic not near genes chrX 19143508 3` UTR RhoGAP18B - chrX_18_19140001 chrX_19140001 RAL-853_125b 4332 chrX 19170562 19170569 chrX 19170684 19170696 6 125 24.0 14.0 19.0 0.3 134 chrX 19170562 5` UTR Inx5 - chrX 19170629 5` UTR Inx5 - chrX 19170696 5` UTR Inx5 - chrX_6_19170001 chrX_19170001 RAL-853_125b 4333 chrX 19170571 19170601 chrX 19170682 19170725 19 119 15.5 14.0 14.8 1.2 154 chrX 19170571 5` UTR Inx5 - chrX 19170648 5` UTR Inx5 - chrX 19170725 5` UTR Inx5 - chrX_19_19170001 chrX_19170001 RAL-853_125b 4334 chrX 19181998 19182043 chrX 19182160 19182205 6 162 1.5 3.5 2.5 1.7 207 chrX 19181998 3` UTR CG7453 + chrX 19182102 intergenic CG7453 + chrX 19182205 intergenic CG7453 + chrX_6_19180001 chrX_19180001 RAL-853_125b 4335 chrX 19185494 19185557 chrX 19185640 19185703 6 146 0.0 11.0 5.5 0.9 209 chrX 19185494 intron CG33253 + chrX 19185598 intron CG33253 + chrX 19185703 exon CG33253 + chrX_6_19185001 chrX_19185001 RAL-853_125b 4336 chrX 19339731 19339764 chrX 19339857 19339890 8 126 3.5 2.0 2.8 2.1 159 chrX 19339731 intron nAChRalpha7 - chrX 19339810 intron nAChRalpha7 - chrX 19339890 intron nAChRalpha7 - chrX_8_19335001 chrX_19335001 RAL-853_125b 4337 chrX 19356955 19357019 chrX 19358446 19358528 NOF 17 1506 5.5 0.0 2.8 4.5 1573 chrX 19356955 intron kek5 + chrX 19357742 intron kek5 + chrX 19358528 intron kek5 + chrX_17_19355001 chrX_19355001 RAL-853_125b 4338 chrX 19380112 19380179 chrX 19380403 19380470 pogo 28 291 11.0 12.5 11.8 2.2 358 chrX 19380112 intron kek5 + chrX 19380291 intron kek5 + chrX 19380470 intron kek5 + chrX_28_19380001 chrX_19380001 RAL-853_125b 4339 chrX 19462261 19462332 chrX 19462409 19462455 12 142 2.5 4.5 3.5 2.7 194 chrX 19462261 intron kek5 + chrX 19462358 intron kek5 + chrX 19462455 intron kek5 + chrX_12_19460001 chrX_19460001 RAL-853_125b 4340 chrX 19472098 19472154 chrX 19472712 19472752 jockey 17 615 4.5 11.5 8.0 1.9 654 chrX 19472098 intergenic kek5 + chrX 19472425 intergenic not near genes chrX 19472752 intergenic not near genes chrX_17_19470001 chrX_19470001 RAL-853_125b 4341 chrX 19500513 19500750 chrX 19500640 19500887 46 133 3.0 3.0 3.0 11.5 374 chrX 19500513 intron,intron CG14200 +,Pfrx + chrX 19500700 intron,intron CG14200 +,Pfrx + chrX 19500887 intron,intron CG14200 +,Pfrx + chrX_46_19500001 chrX_19500001 RAL-853_125b 4342 chrX 19532823 19532863 chrX 19532950 19532955 6 121 4.5 8.5 6.5 0.8 132 chrX 19532823 3` UTR CG32532 - chrX 19532889 3` UTR CG32532 - chrX 19532955 3` UTR CG32532 - chrX_6_19530001 chrX_19530001 RAL-853_125b 4343 chrX 19541387 19541439 chrX 19541517 19541569 18 130 2.5 5.5 4.0 3.6 182 chrX 19541387 intron CG32532 - chrX 19541478 intron CG32532 - chrX 19541569 intron CG32532 - chrX_18_19540001 chrX_19540001 RAL-853_125b 4344 chrX 19553470 19553474 chrX 19553596 19553600 4 126 10.5 10.0 10.2 0.4 130 chrX 19553470 intergenic not near genes chrX 19553535 intergenic not near genes chrX 19553600 intergenic not near genes chrX_4_19550001 chrX_19550001 RAL-853_125b 4345 chrX 19710022 19710094 chrX 19711857 19711930 S-element 30 1833 9.5 10.0 9.8 2.8 1908 chrX 19710022 intron meso18E - chrX 19710976 intron meso18E - chrX 19711930 intron meso18E - chrX_30_19710001 chrX_19710001 RAL-853_125b 4346 chrX 19755485 19755550 chrX 19755620 19755679 23 134 9.5 5.5 7.5 2.7 194 chrX 19755485 intron Pmp70 + chrX 19755582 intron Pmp70 + chrX 19755679 intron Pmp70 + chrX_23_19755001 chrX_19755001 RAL-853_125b 4347 chrX 19794497 19794524 chrX 19794849 19794854 4 346 23.0 10.0 16.5 0.2 357 chrX 19794497 intergenic not near genes chrX 19794676 intergenic not near genes chrX 19794854 intergenic not near genes chrX_4_19790001 chrX_19790001 RAL-853_125b 4348 chrX 19797304 19797337 chrX 19804667 19804688 Stalker4 16 7361 13.0 6.0 9.5 1.5 7384 chrX 19797304 intergenic not near genes chrX 19800996 intergenic not near genes chrX 19804688 intergenic not near genes chrX_16_19800001 chrX_19800001 RAL-853_125b 4349 chrX 19838466 19838472 chrX 19838594 19838600 4 128 23.0 15.5 19.2 0.2 134 chrX 19838466 intron pico - chrX 19838533 intron pico - chrX 19838600 intron pico - chrX_4_19835001 chrX_19835001 RAL-853_125b 4350 chrX 19838473 19838527 chrX 19838590 19838620 10 117 10.5 15.0 12.8 0.7 147 chrX 19838473 intron pico - chrX 19838546 intron pico - chrX 19838620 intron pico - chrX_10_19835001 chrX_19835001 RAL-853_125b 4351 chrX 19884071 19884118 chrX 19884170 19884200 13 102 9.5 9.0 9.2 1.3 129 chrX 19884071 intron Hers + chrX 19884136 intron Hers + chrX 19884200 intron Hers + chrX_13_19880001 chrX_19880001 RAL-853_125b 4352 chrX 19897343 19897411 chrX 19897470 19897526 30 127 10.0 12.5 11.2 2.5 183 chrX 19897343 intron Hers + chrX 19897434 intron Hers + chrX 19897526 intron Hers + chrX_30_19895001 chrX_19895001 RAL-853_125b 4353 chrX 19971776 19971826 chrX 19971903 19971953 24 125 7.5 6.0 6.8 3.1 177 chrX 19971776 intergenic not near genes chrX 19971864 intergenic not near genes chrX 19971953 intergenic not near genes chrX_24_19970001 chrX_19970001 RAL-853_125b 4354 chrX 19983818 19983872 chrX 19983948 19984002 14 130 4.0 1.5 2.8 3.7 184 chrX 19983818 intergenic not near genes chrX 19983910 intergenic not near genes chrX 19984002 intergenic not near genes chrX_14_19980001 chrX_19980001 RAL-853_125b 4355 chrX 19992379 19992404 chrX 19992495 19992523 6 119 14.5 11.5 13.0 0.4 144 chrX 19992379 intergenic not near genes chrX 19992451 intergenic not near genes chrX 19992523 intergenic not near genes chrX_6_19990001 chrX_19990001 RAL-853_125b 4356 chrX 19992408 19992433 chrX 19992494 19992527 7 97 12.5 12.0 12.2 0.5 119 chrX 19992408 intergenic not near genes chrX 19992468 intergenic not near genes chrX 19992527 intergenic not near genes chrX_7_19990001 chrX_19990001 RAL-853_125b 4357 chrX 20041491 20041561 chrX 20041621 20041660 20 128 5.5 7.5 6.5 2.7 169 chrX 20041491 intron Dop2R - chrX 20041576 intron Dop2R - chrX 20041660 intron Dop2R - chrX_20_20040001 chrX_20040001 RAL-853_125b 4358 chrX 20046522 20046563 chrX 20046892 20046933 11 369 0.0 6.5 3.2 2.6 411 chrX 20046522 intron Dop2R - chrX 20046728 intron Dop2R - chrX 20046933 intron Dop2R - chrX_11_20045001 chrX_20045001 RAL-853_125b 4359 chrX 20046564 20046607 chrX 20046934 20046947 6 364 0.0 13.0 6.5 0.8 383 chrX 20046564 intron Dop2R - chrX 20046756 intron Dop2R - chrX 20046947 intron Dop2R - chrX_6_20045001 chrX_20045001 RAL-853_125b 4360 chrX 20052740 20052815 chrX 20052869 20052955 30 132 6.0 4.0 5.0 5.0 215 chrX 20052740 intron Dop2R - chrX 20052848 intron Dop2R - chrX 20052955 intron Dop2R - chrX_30_20050001 chrX_20050001 RAL-853_125b 4361 chrX 20124036 20124107 chrX 20124225 20124296 19 188 3.5 5.5 4.5 3.5 260 chrX 20124036 intron CG34331 + chrX 20124166 intron CG34331 + chrX 20124296 intron CG34331 + chrX_19_20120001 chrX_20120001 RAL-853_125b 4362 chrX 20132253 20132308 chrX 20132386 20132441 21 132 12.5 5.5 9.0 2.1 188 chrX 20132253 intergenic not near genes chrX 20132347 intergenic not near genes chrX 20132441 intergenic not near genes chrX_21_20130001 chrX_20130001 RAL-853_125b 4363 chrX 20145985 20146063 chrX 20146167 20146213 21 174 4.5 7.5 6.0 3.0 228 chrX 20145985 intergenic not near genes chrX 20146099 intergenic not near genes chrX 20146213 intergenic not near genes chrX_21_20145001 chrX_20145001 RAL-853_125b 4364 chrX 20150373 20150395 chrX 20150472 20150534 12 136 10.0 5.5 7.8 1.4 161 chrX 20150373 intron CG9572 + chrX 20150454 intron CG9572 + chrX 20150534 intron CG9572 + chrX_12_20150001 chrX_20150001 RAL-853_125b 4365 chrX 20165979 20166036 chrX 20166094 20166167 27 125 9.5 7.0 8.2 2.9 188 chrX 20165979 intergenic Phf7 - chrX 20166073 intergenic Phf7 - chrX 20166167 intergenic Phf7 - chrX_27_20165001 chrX_20165001 RAL-853_125b 4366 chrX 20263377 20263435 chrX 20263517 20263575 21 134 11.5 3.5 7.5 2.5 198 chrX 20263377 intergenic not near genes chrX 20263476 intergenic not near genes chrX 20263575 intergenic not near genes chrX_21_20260001 chrX_20260001 RAL-853_125b 4367 chrX 20269888 20269945 chrX 20270020 20270077 9 132 7.5 6.0 6.8 1.2 189 chrX 20269888 intergenic Inx6 - chrX 20269982 intergenic Inx6 - chrX 20270077 intergenic Inx6 - chrX_9_20265001 chrX_20265001 RAL-853_125b 4368 chrX 20271458 20271525 chrX 20271600 20271662 7 141 6.0 0.0 3.0 1.8 204 chrX 20271458 intergenic not near genes chrX 20271560 intergenic not near genes chrX 20271662 intergenic not near genes chrX_7_20270001 chrX_20270001 RAL-853_125b 4369 chrX 20312850 20312905 chrX 20312978 20313033 17 126 5.0 3.5 4.2 3.3 183 chrX 20312850 intron CG1504 - chrX 20312942 intron CG1504 - chrX 20313033 intron CG1504 - chrX_17_20310001 chrX_20310001 RAL-853_125b 4370 chrX 20314223 20314260 chrX 20314355 20314389 11 125 11.0 11.5 11.2 0.9 166 chrX 20314223 intron CG1504 - chrX 20314306 intron CG1504 - chrX 20314389 intron CG1504 - chrX_11_20310001 chrX_20310001 RAL-853_125b 4371 chrX 20320262 20320300 chrX 20320389 20320427 16 126 8.5 9.5 9.0 1.6 165 chrX 20320262 intron CG1504 - chrX 20320344 intron CG1504 - chrX 20320427 intron CG1504 - chrX_16_20320001 chrX_20320001 RAL-853_125b 4372 chrX 20359190 20359201 chrX 20360492 20360503 5 1302 6.5 24.0 15.2 0.3 1313 chrX 20359190 intergenic not near genes chrX 20359846 intergenic not near genes chrX 20360503 intergenic not near genes chrX_5_20355001 chrX_20355001 RAL-853_125b 4373 chrX 20369270 20369340 chrX 20369404 20369474 25 134 6.5 4.0 5.2 4.0 204 chrX 20369270 intergenic not near genes chrX 20369372 intergenic not near genes chrX 20369474 intergenic not near genes chrX_25_20365001 chrX_20365001 RAL-853_125b 4374 chrX 20377275 20377338 chrX 20378792 20378855 hobo 9 1512 10.5 10.5 10.5 0.8 1580 chrX 20377275 intergenic not near genes chrX 20378065 intergenic not near genes chrX 20378855 intergenic not near genes chrX_9_20375001 chrX_20375001 RAL-853_125b 4375 chrX 20384962 20384979 chrX 20385472 20385504 7 530 0.0 9.0 4.5 1.3 542 chrX 20384962 intergenic not near genes chrX 20385233 intergenic not near genes chrX 20385504 intergenic not near genes chrX_7_20385001 chrX_20385001 RAL-853_125b 4376 chrX 20415026 20415085 chrX 20415152 20415211 16 126 4.5 0.5 2.5 4.6 185 chrX 20415026 intergenic not near genes chrX 20415118 intergenic not near genes chrX 20415211 intergenic not near genes chrX_16_20415001 chrX_20415001 RAL-853_125b 4377 chrX 20437317 20437335 chrX 20437942 20437960 17 624 16.5 7.5 12.0 1.3 643 chrX 20437317 intron CG1695 + chrX 20437638 intron CG1695 + chrX 20437960 intron CG1695 + chrX_17_20435001 chrX_20435001 RAL-853_125b 4378 chrX 20437336 20437389 chrX 20437941 20438007 25 622 3.5 7.5 5.5 3.8 671 chrX 20437336 intron CG1695 + chrX 20437672 intron CG1695 + chrX 20438007 intron CG1695 + chrX_25_20435001 chrX_20435001 RAL-853_125b 4379 chrX 20443160 20443203 chrX 20443286 20443329 17 126 9.0 9.5 9.2 1.7 169 chrX 20443160 exon CG1695 + chrX 20443244 intron CG1695 + chrX 20443329 intron CG1695 + chrX_17_20440001 chrX_20440001 RAL-853_125b 4380 chrX 20467973 20468041 chrX 20468112 20468173 14 134 3.0 0.0 1.5 5.6 200 chrX 20467973 intron GstT3 + chrX 20468073 intron GstT3 + chrX 20468173 intron GstT3 + chrX_14_20465001 chrX_20465001 RAL-853_125b 4381 chrX 20493874 20493929 chrX 20494083 20494140 8 210 0.0 12.0 6.0 1.1 266 chrX 20493874 intron RhoGAP19D - chrX 20494007 intron RhoGAP19D - chrX 20494140 intron RhoGAP19D - chrX_8_20490001 chrX_20490001 RAL-853_125b 4382 chrX 20504086 20504150 chrX 20505657 20505721 transib2 24 1568 6.5 7.0 6.8 3.1 1635 chrX 20504086 intron RhoGAP19D - chrX 20504904 intron RhoGAP19D - chrX 20505721 intron RhoGAP19D - chrX_24_20500001 chrX_20500001 RAL-853_125b 4383 chrX 20526425 20526465 chrX 20526590 20526631 16 165 8.5 0.0 4.2 3.1 206 chrX 20526425 intergenic not near genes chrX 20526528 intergenic not near genes chrX 20526631 intergenic not near genes chrX_16_20525001 chrX_20525001 RAL-853_125b 4384 chrX 20531647 20531685 chrX 20531787 20531824 8 139 5.0 10.0 7.5 0.9 177 chrX 20531647 intergenic not near genes chrX 20531736 intergenic not near genes chrX 20531824 intergenic not near genes chrX_8_20530001 chrX_20530001 RAL-853_125b 4385 chrX 20541325 20541330 chrX 20541453 20541501 6 165 1.0 0.0 0.5 4.0 176 chrX 20541325 intron RunxB + chrX 20541413 intron RunxB + chrX 20541501 intron RunxB + chrX_6_20540001 chrX_20540001 RAL-853_125b 4386 chrX 20635383 20635440 chrX 20635599 20635656 20 216 2.5 7.5 5.0 3.3 273 chrX 20635383 intergenic not near genes chrX 20635520 intergenic not near genes chrX 20635656 intergenic not near genes chrX_20_20635001 chrX_20635001 RAL-853_125b 4387 chrX 20704111 20704176 chrX 20704423 20704488 7 312 3.5 2.0 2.8 1.8 377 chrX 20704111 intergenic not near genes chrX 20704300 intergenic not near genes chrX 20704488 intergenic not near genes chrX_7_20700001 chrX_20700001 RAL-853_125b 4388 chrX 20708356 20708365 chrX 20708470 20708486 4 122 9.0 5.5 7.2 0.5 130 chrX 20708356 intergenic not near genes chrX 20708421 intergenic not near genes chrX 20708486 intergenic not near genes chrX_4_20705001 chrX_20705001 RAL-853_125b 4389 chrX 20719169 20719201 chrX 20719552 20719584 7 382 6.5 14.0 10.2 0.6 415 chrX 20719169 intergenic not near genes chrX 20719376 intergenic not near genes chrX 20719584 intergenic not near genes chrX_7_20715001 chrX_20715001 RAL-853_125b 4390 chrX 20721703 20721875 chrX 20721870 20722022 7 156 0.0 0.0 0.0 7.0 319 chrX 20721703 intergenic not near genes chrX 20721862 intergenic not near genes chrX 20722022 intergenic not near genes chrX_7_20720001 chrX_20720001 RAL-853_125b 4391 chrX 20776801 20776829 chrX 20776994 20777022 8 193 8.0 13.5 10.8 0.7 221 chrX 20776801 intron shakB - chrX 20776912 intron shakB - chrX 20777022 intron shakB - chrX_8_20775001 chrX_20775001 RAL-853_125b 4392 chrX 20810673 20810741 chrX 20810801 20810869 5 128 4.0 3.5 3.8 1.0 196 chrX 20810673 intron shakB - chrX 20810771 intron shakB - chrX 20810869 intron shakB - chrX_5_20810001 chrX_20810001 RAL-853_125b 4393 chrX 20836688 20836754 chrX 20844340 20844406 roo 20 7650 3.0 7.0 5.0 3.3 7718 chrX 20836688 intron shakB - chrX 20840547 intron shakB - chrX 20844406 intron shakB - chrX_20_20840001 chrX_20840001 RAL-853_125b 4394 chrX 20923748 20923771 chrX 20923876 20923883 4 124 12.0 5.5 8.8 0.4 135 chrX 20923748 intron shakB - chrX 20923816 intron shakB - chrX 20923883 intron shakB - chrX_4_20920001 chrX_20920001 RAL-853_125b 4395 chrX 20940682 20940715 chrX 20942201 20942234 hobo 6 1519 9.0 0.5 4.8 1.0 1552 chrX 20940682 intergenic not near genes chrX 20941458 intergenic not near genes chrX 20942234 intergenic not near genes chrX_6_20940001 chrX_20940001 RAL-853_125b 4396 chrX 20956923 20956952 chrX 20962418 20962447 I-element 13 5495 0.0 4.0 2.0 4.3 5524 chrX 20956923 intergenic not near genes chrX 20959685 intergenic not near genes chrX 20962447 intergenic Ser6 - chrX_13_20955001 chrX_20955001 RAL-853_125b 4397 chrX 20983846 20983913 chrX 20983981 20984048 21 132 3.5 9.0 6.2 2.9 202 chrX 20983846 intergenic not near genes chrX 20983947 intergenic not near genes chrX 20984048 intergenic not near genes chrX_21_20980001 chrX_20980001 RAL-853_125b 4398 chrX 21022249 21022262 chrX 21022468 21022481 5 219 19.5 16.5 18.0 0.3 232 chrX 21022249 intergenic not near genes chrX 21022365 intergenic not near genes chrX 21022481 intergenic not near genes chrX_5_21020001 chrX_21020001 RAL-853_125b 4399 chrX 21029096 21029178 chrX 21029363 21029418 10 263 2.5 10.5 6.5 1.3 322 chrX 21029096 3` UTR CG1529 - chrX 21029257 3` UTR CG1529 - chrX 21029418 3` UTR CG1529 - chrX_10_21025001 chrX_21025001 RAL-853_125b 4400 chrX 21032271 21032284 chrX 21032413 21032415 5 140 2.0 12.0 7.0 0.6 144 chrX 21032271 intergenic CG1529 - chrX 21032343 intergenic CG1529 - chrX 21032415 intergenic CG1529 - chrX_5_21030001 chrX_21030001 RAL-853_125b 4401 chrX 18580940 18580956 chrX 21039411 21039427 INE-1 4 2458471 35.0 23.0 29.0 0.1 2458487 chrX 18580940 intergenic not near genes chrX 19810184 intergenic not near genes chrX 21039427 3` UTR Ntf-2 + chrX_4_19810001 chrX_19810001 RAL-853_125b 4402 chrX 21061819 21061882 chrX 21062354 21062416 roo 18 533 8.0 5.0 6.5 2.4 597 chrX 21061819 intron bves + chrX 21062118 intron bves + chrX 21062416 intron,3` UTR bves +,CG32512 - chrX_18_21060001 chrX_21060001 RAL-853_125b 4403 chrX 21086092 21086149 chrX 21087171 21087228 jockey 11 1073 7.5 8.5 8.0 1.2 1136 chrX 21086092 intergenic not near genes chrX 21086660 intergenic not near genes chrX 21087228 intergenic not near genes chrX_11_21085001 chrX_21085001 RAL-853_125b 4404 chrX 21087996 21088042 chrX 21088178 21088224 15 182 11.5 2.5 7.0 1.9 228 chrX 21087996 intergenic not near genes chrX 21088110 intergenic not near genes chrX 21088224 intergenic not near genes chrX_15_21085001 chrX_21085001 RAL-853_125b 4405 chrX 21118017 21118087 chrX 21118163 21118233 10 145 1.0 2.0 1.5 4.0 216 chrX 21118017 intron CG15445 + chrX 21118125 intron CG15445 + chrX 21118233 intron CG15445 + chrX_10_21115001 chrX_21115001 RAL-853_125b 4406 chrX 21190493 21190789 chrX 21190699 21190920 7 140 0.0 0.0 0.0 7.0 427 chrX 21190493 intergenic not near genes chrX 21190706 intergenic not near genes chrX 21190920 intergenic not near genes chrX_7_21190001 chrX_21190001 RAL-853_125b 4407 chrX 21190805 21190824 chrX 21190936 21190948 7 129 0.0 12.0 6.0 1.0 143 chrX 21190805 intergenic not near genes chrX 21190876 intergenic not near genes chrX 21190948 intergenic not near genes chrX_7_21190001 chrX_21190001 RAL-853_125b 4408 chrX 21197011 21197052 chrX 21197139 21197180 11 126 10.5 7.5 9.0 1.1 169 chrX 21197011 intergenic not near genes chrX 21197096 intergenic not near genes chrX 21197180 intergenic not near genes chrX_11_21195001 chrX_21195001 RAL-853_125b 4409 chrX 21197054 21197084 chrX 21197135 21197212 9 118 6.0 9.0 7.5 1.1 158 chrX 21197054 intergenic not near genes chrX 21197133 intergenic not near genes chrX 21197212 intergenic not near genes chrX_9_21195001 chrX_21195001 RAL-853_125b 4410 chrX 21241702 21241718 chrX 21241853 21241869 8 151 7.0 0.0 3.5 1.8 167 chrX 21241702 intron CG32521 - chrX 21241786 intron CG32521 - chrX 21241869 intron CG32521 - chrX_8_21240001 chrX_21240001 RAL-853_125b 4411 chrX 21258790 21258851 chrX 21258940 21258973 27 148 7.5 6.0 6.8 3.5 183 chrX 21258790 intron CG32521 - chrX 21258882 intron CG32521 - chrX 21258973 intron CG32521 - chrX_27_21255001 chrX_21255001 RAL-853_125b 4412 chrX 21259736 21259808 chrX 21259877 21259947 18 140 0.0 3.0 1.5 7.2 211 chrX 21259736 intron CG32521 - chrX 21259842 intron CG32521 - chrX 21259947 intron CG32521 - chrX_18_21255001 chrX_21255001 RAL-853_125b 4413 chrX 21265221 21265223 chrX 21265351 21265351 4 132 16.5 9.5 13.0 0.3 130 chrX 21265221 intron CG32521 - chrX 21265286 intron CG32521 - chrX 21265351 intron CG32521 - chrX_4_21265001 chrX_21265001 RAL-853_125b 4414 chrX 21268018 21268084 chrX 21268149 21268215 23 131 5.0 2.0 3.5 5.1 197 chrX 21268018 intron CG32521 - chrX 21268116 intron CG32521 - chrX 21268215 intron CG32521 - chrX_23_21265001 chrX_21265001 RAL-853_125b 4415 chrX 21328067 21328146 chrX 21328228 21328308 18 160 3.0 4.0 3.5 4.0 241 chrX 21328067 3` UTR CG1486 + chrX 21328188 intergenic CG1486 +,tty - chrX 21328308 intergenic CG1486 +,tty - chrX_18_21325001 chrX_21325001 RAL-853_125b 4416 chrX 21358034 21358089 chrX 21358164 21358219 15 130 8.5 11.5 10.0 1.4 185 chrX 21358034 intergenic sol +,Sep1 + chrX 21358126 intergenic Sep1 +,sol + chrX 21358219 intergenic Sep1 +,sol + chrX_15_21355001 chrX_21355001 RAL-853_125b 4417 chrX 21388489 21388496 chrX 21388623 21388630 5 134 18.0 1.5 9.8 0.5 141 chrX 21388489 intergenic mst + chrX 21388560 intergenic mst + chrX 21388630 intergenic mst + chrX_5_21385001 chrX_21385001 RAL-853_125b 4418 chrX 21410644 21410668 chrX 21410773 21410797 10 129 0.0 8.0 4.0 2.0 153 chrX 21410644 intergenic CR45003 - chrX 21410720 intergenic CR45003 - chrX 21410797 intergenic CR45003 - chrX_10_21410001 chrX_21410001 RAL-853_125b 4419 chrX 21435766 21435855 chrX 21435907 21435986 20 134 1.0 9.0 5.0 3.3 220 chrX 21435766 intron CG42343 - chrX 21435876 intron CG42343 - chrX 21435986 intron CG42343 - chrX_20_21435001 chrX_21435001 RAL-853_125b 4420 chrX 21439492 21439567 chrX 21439623 21439698 21 131 4.5 8.5 6.5 2.8 206 chrX 21439492 intron CG42343 - chrX 21439595 intron CG42343 - chrX 21439698 intron CG42343 - chrX_21_21435001 chrX_21435001 RAL-853_125b 4421 chrX 21454823 21454871 chrX 21454957 21455005 11 134 8.5 10.5 9.5 1.0 182 chrX 21454823 intron CG42343 - chrX 21454914 intron CG42343 - chrX 21455005 intron CG42343 - chrX_11_21450001 chrX_21450001 RAL-853_125b 4422 chrX 21455168 21455244 chrX 21455397 21455481 13 236 6.5 2.0 4.2 2.5 313 chrX 21455168 intron CG42343 - chrX 21455324 intron CG42343 - chrX 21455481 intron CG42343 - chrX_13_21455001 chrX_21455001 RAL-853_125b 4423 chrX 21458642 21458717 chrX 21464128 21464203 Ivk 14 5483 5.5 6.0 5.8 2.1 5561 chrX 21458642 intergenic not near genes chrX 21461422 intergenic not near genes chrX 21464203 intergenic not near genes chrX_14_21460001 chrX_21460001 RAL-853_125b 4424 chrX 21500515 21500589 chrX 21500766 21500840 9 250 3.5 9.0 6.2 1.2 325 chrX 21500515 intron CR45082 - chrX 21500678 intron CR45082 - chrX 21500840 intron CR45082 - chrX_9_21500001 chrX_21500001 RAL-853_125b 4425 chrX 21516945 21517015 chrX 21517074 21517137 32 127 6.5 4.0 5.2 5.2 192 chrX 21516945 intron CR45082 - chrX 21517041 intron CR45082 - chrX 21517137 intron CR45082 - chrX_32_21515001 chrX_21515001 RAL-853_125b 4426 chrX 21565404 21565436 chrX 21565532 21565564 8 128 6.5 14.5 10.5 0.7 160 chrX 21565404 intergenic not near genes chrX 21565484 intergenic not near genes chrX 21565564 intergenic not near genes chrX_8_21565001 chrX_21565001 RAL-853_125b 4427 chrX 21567910 21567939 chrX 21568041 21568055 5 123 19.5 0.0 9.8 0.5 145 chrX 21567910 intergenic not near genes chrX 21567982 intergenic not near genes chrX 21568055 intergenic not near genes chrX_5_21565001 chrX_21565001 RAL-853_125b 4428 chrX 21581507 21581562 chrX 21581638 21581693 12 131 4.5 0.0 2.2 3.8 186 chrX 21581507 intergenic not near genes chrX 21581600 intergenic not near genes chrX 21581693 intergenic not near genes chrX_12_21580001 chrX_21580001 RAL-853_125b 4429 chrX 21595525 21595557 chrX 21598648 21598680 micropia 9 3123 5.0 13.5 9.2 0.9 3155 chrX 21595525 intergenic not near genes chrX 21597102 intergenic not near genes chrX 21598680 intergenic not near genes chrX_9_21595001 chrX_21595001 RAL-853_125b 4430 chrX 21668212 21668290 chrX 21668347 21668424 25 133 5.0 2.0 3.5 5.6 212 chrX 21668212 intergenic not near genes chrX 21668318 intergenic not near genes chrX 21668424 intergenic not near genes chrX_25_21665001 chrX_21665001 RAL-853_125b 4431 chrX 22448221 22448294 chrX 22448410 22448483 29 188 0.0 8.0 4.0 5.8 262 chrX 22448221 intron CG14615 - chrX 22448352 intron CG14615 - chrX 22448483 intron CG14615 - chrX_29_22445001 chrX_22445001 RAL-853_125b 4432 chrX 22522584 22522645 chrX 22525452 22525515 NOF 11 2867 6.5 5.0 5.8 1.6 2931 chrX 22522584 intron CG17600 + chrX 22524050 intron CG17600 + chrX 22525515 intron CG17600 + chrX_11_22520001 chrX_22520001 RAL-853_125b 4433 chrX 22564569 22564586 chrX 22575091 22575108 jockey 9 10522 21.0 9.0 15.0 0.6 10539 chrX 22564569 intergenic not near genes chrX 22569838 intergenic not near genes chrX 22575108 intergenic not near genes chrX_9_22565001 chrX_22565001 RAL-853_125b 4434 chrX 22585462 22585523 chrX 22585595 22585657 10 132 11.0 0.0 5.5 1.5 195 chrX 22585462 intron Cda4 - chrX 22585560 intron Cda4 - chrX 22585657 intron Cda4 - chrX_10_22585001 chrX_22585001 RAL-853_125b 4435 chrX 22620446 22620514 chrX 22626765 22626833 297 15 6317 6.0 5.0 5.5 2.3 6387 chrX 22620446 intron Cda4 - chrX 22623640 intron Cda4 - chrX 22626833 intron Cda4 - chrX_15_22620001 chrX_22620001 RAL-853_125b 4436 chrX 22637490 22637517 chrX 22637616 22637645 9 128 7.5 0.0 3.8 1.9 155 chrX 22637490 intergenic not near genes chrX 22637568 intergenic not near genes chrX 22637645 intergenic not near genes chrX_9_22635001 chrX_22635001 RAL-853_125b 4437 chrX 22646480 22646498 chrX 22646631 22646649 5 151 10.5 0.0 5.2 0.8 169 chrX 22646480 intergenic not near genes chrX 22646564 intergenic not near genes chrX 22646649 intergenic not near genes chrX_5_22645001 chrX_22645001 RAL-853_125b 4438 chrX 22677252 22677322 chrX 22677511 22677574 23 258 5.5 9.0 7.2 2.8 322 chrX 22677252 intron CR44997 + chrX 22677413 intron CR44997 + chrX 22677574 intron CR44997 + chrX_23_22675001 chrX_22675001 RAL-853_125b 4439 chrX 22681436 22681481 chrX 22688942 22688987 HMS-Beagle2 14 7504 13.0 7.5 10.2 1.2 7551 chrX 22681436 intron CR44997 + chrX 22685212 intron CR44997 + chrX 22688987 intron CR44997 + chrX_14_22685001 chrX_22685001 RAL-853_125b 4440 chrX 22694304 22694352 chrX 22694445 22694493 15 141 5.0 7.5 6.2 2.1 189 chrX 22694304 intron CR44997 + chrX 22694398 intron CR44997 + chrX 22694493 intron CR44997 + chrX_15_22690001 chrX_22690001 RAL-853_125b 4441 chrX 22697458 22697512 chrX 22701805 22701859 Juan 20 4347 13.5 9.5 11.5 1.6 4401 chrX 22697458 intron CR44997 + chrX 22699658 intron CR44997 + chrX 22701859 intron CR44997 + chrX_20_22695001 chrX_22695001 RAL-853_125b 4442 chrX 22734412 22734449 chrX 22734541 22734578 15 126 5.0 4.0 4.5 2.7 166 chrX 22734412 intron CR44997 + chrX 22734495 intron CR44997 + chrX 22734578 intron CR44997 + chrX_15_22730001 chrX_22730001 RAL-853_125b 4443 chrX 22771485 22771534 chrX 22774814 22774820 297 14 3332 7.0 6.5 6.8 1.8 3335 chrX 22771485 intron CR44997 + chrX 22773152 intron CR44997 + chrX 22774820 intron CR44997 + chrX_14_22770001 chrX_22770001 RAL-853_125b 4444 chrX 22784047 22784106 chrX 22784180 22784239 19 133 4.5 6.5 5.5 2.9 192 chrX 22784047 intron CR44997 + chrX 22784143 intron CR44997 + chrX 22784239 intron CR44997 + chrX_19_22780001 chrX_22780001 RAL-853_125b 4445 chrX 22796950 22797022 chrX 22797085 22797157 19 135 1.5 6.0 3.8 4.0 207 chrX 22796950 intron CR44997 + chrX 22797054 intron CR44997 + chrX 22797157 intron CR44997 + chrX_19_22795001 chrX_22795001 RAL-853_125b 4446 chrX 22811957 22812005 chrX 22816779 22816827 F-element 18 4822 12.0 11.0 11.5 1.4 4870 chrX 22811957 intergenic CG12446 - chrX 22814392 intergenic not near genes chrX 22816827 intergenic not near genes chrX_18_22810001 chrX_22810001 RAL-853_125b 4447 chrX 22824218 22824433 chrX 22824394 22824616 35 179 0.5 0.5 0.5 23.3 398 chrX 22824218 intergenic fog - chrX 22824417 3` UTR fog - chrX 22824616 3` UTR fog - chrX_35_22820001 chrX_22820001 RAL-853_125b 4448 chrX 22844495 22844527 chrX 22844632 22844664 14 137 8.5 4.5 6.5 1.9 169 chrX 22844495 intron,intron fog -,CG42346 + chrX 22844580 intron,intron fog -,CG42346 + chrX 22844664 intron,intron fog -,CG42346 + chrX_14_22840001 chrX_22840001 RAL-853_125b 4449 chrX 22862127 22862136 chrX 22862260 22862269 4 133 14.5 17.0 15.8 0.2 142 chrX 22862127 intron CG42346 + chrX 22862198 intron CG42346 + chrX 22862269 intron CG42346 + chrX_4_22860001 chrX_22860001 RAL-853_125b 4450 chrX 22869140 22869165 chrX 22869266 22869275 4 119 1.0 8.5 4.8 0.7 135 chrX 22869140 intron CG42346 + chrX 22869208 intron CG42346 + chrX 22869275 intron CG42346 + chrX_4_22865001 chrX_22865001 RAL-853_125b 4451 chrX 22891090 22891126 chrX 22891223 22891259 5 133 3.5 1.0 2.2 1.6 169 chrX 22891090 intergenic not near genes chrX 22891174 intergenic not near genes chrX 22891259 intergenic not near genes chrX_5_22890001 chrX_22890001 RAL-853_125b 4452 chrX 22898811 22898864 chrX 22899258 22899289 5 443 3.5 0.0 1.8 1.8 478 chrX 22898811 intergenic not near genes chrX 22899050 intergenic not near genes chrX 22899289 intergenic not near genes chrX_5_22895001 chrX_22895001 RAL-853_125b 4453 chrX 22916138 22916204 chrX 22916336 22916390 16 187 0.0 7.0 3.5 3.6 252 chrX 22916138 intergenic not near genes chrX 22916264 intergenic not near genes chrX 22916390 intergenic not near genes chrX_16_22915001 chrX_22915001 RAL-853_125b 4454 chrX 22922470 22922538 chrX 22922600 22922668 16 130 0.0 5.0 2.5 4.6 198 chrX 22922470 intergenic not near genes chrX 22922569 intergenic not near genes chrX 22922668 intergenic not near genes chrX_16_22920001 chrX_22920001 RAL-853_125b 4455 chrX 22928471 22928484 chrX 22928678 22928691 6 207 12.0 9.0 10.5 0.5 220 chrX 22928471 intergenic not near genes chrX 22928581 intergenic not near genes chrX 22928691 intergenic not near genes chrX_6_22925001 chrX_22925001 RAL-853_125b 4456 chrX 22928486 22928542 chrX 22928668 22928739 17 204 4.5 7.5 6.0 2.4 253 chrX 22928486 intergenic not near genes chrX 22928612 intergenic not near genes chrX 22928739 intergenic not near genes chrX_17_22925001 chrX_22925001 RAL-853_125b 4457 chrX 22987075 22987125 chrX 22989784 22989834 Burdock 12 2708 3.0 7.0 5.0 2.0 2759 chrX 22987075 intron,intron stnA -,stnB - chrX 22988454 intron,intron stnA -,stnB - chrX 22989834 intron,intron stnA -,stnB - chrX_12_22985001 chrX_22985001 RAL-853_125b 4458 chrX 22992349 22992422 chrX 22992530 22992588 26 177 7.0 6.0 6.5 3.5 239 chrX 22992349 intron,intron stnA -,stnB - chrX 22992468 intron,intron stnA -,stnB - chrX 22992588 3` UTR,exon stnA -,stnB - chrX_26_22990001 chrX_22990001 RAL-853_125b 4459 chrX 22996271 22996334 chrX 23003553 23003616 roo 24 7281 9.5 8.5 9.0 2.4 7345 chrX 22996271 intron,intron stnA -,stnB - chrX 22999944 intron,intron stnA -,stnB - chrX 23003616 intron,intron stnA -,stnB - chrX_24_22995001 chrX_22995001 RAL-853_125b 4460 chrX 23036343 23036400 chrX 23037794 23037851 pogo 19 1450 7.5 5.5 6.5 2.5 1508 chrX 23036343 intron CG12061 + chrX 23037097 intron CG12061 + chrX 23037851 intron CG12061 + chrX_19_23035001 chrX_23035001 RAL-853_125b 4461 chrX 23045201 23045246 chrX 23045333 23045380 9 133 9.5 7.5 8.5 0.9 179 chrX 23045201 intron CG12061 + chrX 23045290 intron CG12061 + chrX 23045380 intron CG12061 + chrX_9_23045001 chrX_23045001 RAL-853_125b 4462 chrY 655909 655957 chrY 656135 656168 4 222 2.5 0.5 1.5 1.6 259 chrY 655909 intron kl-2 + chrY 656038 intron kl-2 + chrY 656168 exon kl-2 + chrY_4_655001 chrY_655001 RAL-853_125b 4463 chrY 864667 864736 chrY 864794 864862 7 126 25.5 25.0 25.2 0.3 195 chrY 864667 intergenic not near genes chrY 864764 intergenic not near genes chrY 864862 intergenic not near genes chrY_7_860001 chrY_860001 RAL-853_125b 4464 chrY 975742 975825 chrY 975872 975982 19 167 232.5 252.0 242.2 0.1 240 chrY 975742 intergenic not near genes chrY 975862 intergenic not near genes chrY 975982 intergenic not near genes chrY_19_975001 chrY_975001 RAL-853_125b 4465 chrY 1445411 1445433 chrY 1447399 1447413 5 1983 19.0 18.0 18.5 0.3 2002 chrY 1445411 intergenic not near genes chrY 1446412 intergenic not near genes chrY 1447413 intergenic not near genes chrY_5_1445001 chrY_1445001 RAL-853_125b 4466 chrY 3664951 3664995 chrY 3665105 3665149 5 154 0.5 0.5 0.5 3.3 198 chrY 3664951 intergenic CG40948 + chrY 3665050 intergenic CG40948 + chrY 3665149 intergenic not near genes chrY_5_3665001 chrY_3665001 RAL-853_125b