SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 46303 46376 chr2L 46430 46504 19 127 6.5 5.0 5.8 2.8 201 chr2L 46303 intron Cda5 - chr2L 46404 intron Cda5 - chr2L 46504 intron Cda5 - chr2L_19_45001 chr2L_45001 RAL-850 2 chr2L 47425 47484 chr2L 52580 52582 jockey 23 5152 8.5 17.5 13.0 1.6 5157 chr2L 47425 intron Cda5 - chr2L 50004 intron Cda5 - chr2L 52582 intron Cda5 - chr2L_23_50001 chr2L_50001 RAL-850 3 chr2L 62030 62100 chr2L 62237 62312 33 209 62.5 63.5 63.0 0.5 282 chr2L 62030 intron Cda5 - chr2L 62171 intron Cda5 - chr2L 62312 intron Cda5 - chr2L_33_60001 chr2L_60001 RAL-850 4 chr2L 79784 79860 chr2L 80178 80233 40 391 6.0 8.5 7.2 4.9 449 chr2L 79784 intergenic not near genes chr2L 80008 intergenic not near genes chr2L 80233 intergenic not near genes chr2L_40_80001 chr2L_80001 RAL-850 5 chr2L 89671 89736 chr2L 89796 89863 25 120 19.5 9.5 14.5 1.6 192 chr2L 89671 intergenic not near genes chr2L 89767 intergenic not near genes chr2L 89863 intergenic not near genes chr2L_25_85001 chr2L_85001 RAL-850 6 chr2L 172013 172081 chr2L 172144 172212 17 131 10.0 5.0 7.5 2.0 199 chr2L 172013 intron spen + chr2L 172112 intron spen + chr2L 172212 intron spen + chr2L_17_170001 chr2L_170001 RAL-850 7 chr2L 263269 263319 chr2L 263465 263506 19 195 5.0 16.0 10.5 1.7 237 chr2L 263269 intron,3` UTR CG3645 -,CG17075 - chr2L 263388 intron,3` UTR CG3645 -,CG17075 - chr2L 263506 intron,3` UTR CG3645 -,CG17075 - chr2L_19_260001 chr2L_260001 RAL-850 8 chr2L 276546 276561 chr2L 276637 276687 7 111 3.5 10.0 6.8 0.9 141 chr2L 276546 intron CG17078 - chr2L 276616 intron CG17078 - chr2L 276687 intron CG17078 - chr2L_7_275001 chr2L_275001 RAL-850 9 chr2L 297648 297715 chr2L 297798 297861 28 147 8.5 10.0 9.2 2.7 213 chr2L 297648 intergenic Hop +,Pi3K21B + chr2L 297754 intergenic Pi3K21B +,Hop + chr2L 297861 intergenic Pi3K21B +,Hop + chr2L_28_295001 chr2L_295001 RAL-850 10 chr2L 325114 325142 chr2L 325216 325269 18 120 14.0 9.0 11.5 1.4 155 chr2L 325114 intron Plc21C + chr2L 325192 intron Plc21C + chr2L 325269 intron Plc21C + chr2L_18_325001 chr2L_325001 RAL-850 11 chr2L 347847 347896 chr2L 355397 355446 blood 24 7550 8.0 4.5 6.2 3.3 7599 chr2L 347847 3` UTR Plc21C + chr2L 351646 intron Plc21C + chr2L 355446 3` UTR Plc21C + chr2L_24_350001 chr2L_350001 RAL-850 12 chr2L 371393 371445 chr2L 371522 371574 14 129 4.0 9.5 6.8 1.8 181 chr2L 371393 intergenic not near genes chr2L 371484 intergenic not near genes chr2L 371574 intergenic not near genes chr2L_14_370001 chr2L_370001 RAL-850 13 chr2L 407898 407971 chr2L 408029 408091 23 130 8.5 9.5 9.0 2.3 193 chr2L 407898 3` UTR RpI135 + chr2L 407994 intergenic RpI135 +,AP-2alpha - chr2L 408091 3` UTR AP-2alpha - chr2L_23_405001 chr2L_405001 RAL-850 14 chr2L 428066 428091 chr2L 428172 428217 14 117 21.0 19.0 20.0 0.7 151 chr2L 428066 intergenic not near genes chr2L 428142 intergenic not near genes chr2L 428217 intergenic not near genes chr2L_14_425001 chr2L_425001 RAL-850 15 chr2L 467318 467481 chr2L 467467 467620 41 151 0.0 0.0 0.0 41.0 302 chr2L 467318 intron CG4297 - chr2L 467469 intron CG4297 - chr2L 467620 intron CG4297 - chr2L_41_465001 chr2L_465001 RAL-850 16 chr2L 664177 664230 chr2L 664284 664342 17 106 10.0 11.0 10.5 1.5 165 chr2L 664177 intron ds - chr2L 664260 intron ds - chr2L 664342 intron ds - chr2L_17_660001 chr2L_660001 RAL-850 17 chr2L 666232 666297 chr2L 666358 666406 24 123 4.5 2.5 3.5 5.3 174 chr2L 666232 intron ds - chr2L 666319 intron ds - chr2L 666406 intron ds - chr2L_24_665001 chr2L_665001 RAL-850 18 chr2L 686920 686925 chr2L 696010 696015 roo 4 9090 8.5 8.0 8.2 0.4 9095 chr2L 686920 intron ds - chr2L 691468 intron ds - chr2L 696015 intron ds - chr2L_4_690001 chr2L_690001 RAL-850 19 chr2L 686926 686941 chr2L 695976 696031 roo 7 9084 6.5 5.5 6.0 1.0 9105 chr2L 686926 intron ds - chr2L 691478 intron ds - chr2L 696031 intron ds - chr2L_7_690001 chr2L_690001 RAL-850 20 chr2L 721183 721189 chr2L 721446 721452 5 263 12.0 6.0 9.0 0.5 269 chr2L 721183 intergenic not near genes chr2L 721318 intergenic not near genes chr2L 721452 intergenic not near genes chr2L_5_720001 chr2L_720001 RAL-850 21 chr2L 764503 764578 chr2L 764653 764728 27 148 7.5 9.0 8.2 2.9 225 chr2L 764503 intergenic not near genes chr2L 764616 intergenic not near genes chr2L 764728 intergenic not near genes chr2L_27_760001 chr2L_760001 RAL-850 22 chr2L 770429 770450 chr2L 772260 772276 Bari1 10 1830 20.5 13.0 16.8 0.6 1847 chr2L 770429 intergenic not near genes chr2L 771352 intergenic not near genes chr2L 772276 intergenic CR44614 + chr2L_10_770001 chr2L_770001 RAL-850 23 chr2L 770453 770481 chr2L 772251 772306 Bari1 14 1818 14.0 12.0 13.0 1.0 1853 chr2L 770453 intergenic not near genes chr2L 771380 intergenic not near genes chr2L 772306 intergenic CR44614 + chr2L_14_770001 chr2L_770001 RAL-850 24 chr2L 849423 849481 chr2L 849564 849622 23 140 4.5 5.0 4.8 4.0 199 chr2L 849423 intron drongo - chr2L 849522 intron drongo - chr2L 849622 intron drongo - chr2L_23_845001 chr2L_845001 RAL-850 25 chr2L 936526 936586 chr2L 936668 936726 8 138 7.0 4.0 5.5 1.2 200 chr2L 936526 intron CG4341 + chr2L 936626 intron CG4341 + chr2L 936726 intron CG4341 + chr2L_8_935001 chr2L_935001 RAL-850 26 chr2L 948827 948903 chr2L 949096 949154 10 267 7.0 7.5 7.2 1.2 327 chr2L 948827 intron CG4341 + chr2L 948990 intron CG4341 + chr2L 949154 intron CG4341 + chr2L_10_945001 chr2L_945001 RAL-850 27 chr2L 976831 976910 chr2L 984517 984596 roo 22 7686 8.5 7.5 8.0 2.4 7765 chr2L 976831 intergenic not near genes chr2L 980714 intergenic not near genes chr2L 984596 intergenic not near genes chr2L_22_980001 chr2L_980001 RAL-850 28 chr2L 996676 996721 chr2L 1005821 1005866 roo 13 9144 7.5 5.5 6.5 1.7 9190 chr2L 996676 intergenic not near genes chr2L 1001271 intergenic not near genes chr2L 1005866 intergenic not near genes chr2L_13_1000001 chr2L_1000001 RAL-850 29 chr2L 1025080 1025120 chr2L 1025208 1025228 16 128 16.0 14.0 15.0 1.0 148 chr2L 1025080 intron IA-2 - chr2L 1025154 intron IA-2 - chr2L 1025228 intron IA-2 - chr2L_16_1025001 chr2L_1025001 RAL-850 30 chr2L 1066051 1066115 chr2L 1066182 1066246 28 130 11.5 8.0 9.8 2.6 195 chr2L 1066051 intron S - chr2L 1066148 intron S - chr2L 1066246 intron S - chr2L_28_1065001 chr2L_1065001 RAL-850 31 chr2L 1094208 1094244 chr2L 1094334 1094370 16 126 15.0 0.0 7.5 1.9 162 chr2L 1094208 intron CG4629 - chr2L 1094289 intron CG4629 - chr2L 1094370 intron CG4629 - chr2L_16_1090001 chr2L_1090001 RAL-850 32 chr2L 1137610 1137682 chr2L 1137840 1137912 32 230 9.5 12.0 10.8 2.7 302 chr2L 1137610 intron CG4577 + chr2L 1137761 intron CG4577 + chr2L 1137912 intron CG4577 + chr2L_32_1135001 chr2L_1135001 RAL-850 33 chr2L 1156817 1156821 chr2L 1156972 1156973 5 154 25.5 13.0 19.2 0.2 156 chr2L 1156817 intron capt - chr2L 1156895 intron capt - chr2L 1156973 intron capt - chr2L_5_1155001 chr2L_1155001 RAL-850 34 chr2L 1156823 1156890 chr2L 1156970 1157045 25 153 9.0 10.5 9.8 2.3 222 chr2L 1156823 intron capt - chr2L 1156934 intron capt - chr2L 1157045 intron capt - chr2L_25_1155001 chr2L_1155001 RAL-850 35 chr2L 1199822 1199861 chr2L 1199980 1200019 6 158 2.0 9.0 5.5 0.9 197 chr2L 1199822 3` UTR CG43348 + chr2L 1199920 3` UTR CG43348 + chr2L 1200019 intergenic CG43348 +,CG43349 + chr2L_6_1195001 chr2L_1195001 RAL-850 36 chr2L 1201715 1201718 chr2L 8030624 8030627 5 6828909 9.0 14.0 11.5 0.4 6828912 chr2L 1201715 intergenic CG5011 + chr2L 4616171 intergenic not near genes chr2L 8030627 intron CG7367 - chr2L_5_4615001 chr2L_4615001 RAL-850 37 chr2L 1220087 1220157 chr2L 1227603 1227673 blood 25 7516 12.0 9.5 10.8 2.1 7586 chr2L 1220087 intron CG42329 + chr2L 1223880 intron CG42329 + chr2L 1227673 intron CG42329 + chr2L_25_1220001 chr2L_1220001 RAL-850 38 chr2L 1237965 1238003 chr2L 1238103 1238139 15 135 3.5 5.5 4.5 2.7 174 chr2L 1237965 intergenic not near genes chr2L 1238052 intergenic not near genes chr2L 1238139 intergenic not near genes chr2L_15_1235001 chr2L_1235001 RAL-850 39 chr2L 1244362 1244429 chr2L 1244489 1244541 27 126 7.5 5.5 6.5 3.6 179 chr2L 1244362 intergenic not near genes chr2L 1244452 intergenic not near genes chr2L 1244541 intergenic not near genes chr2L_27_1240001 chr2L_1240001 RAL-850 40 chr2L 1261082 1261260 chr2L 1261213 1261389 12 129 0.5 0.0 0.2 10.0 307 chr2L 1261082 intron robo3 + chr2L 1261236 intron robo3 + chr2L 1261389 intron robo3 + chr2L_12_1260001 chr2L_1260001 RAL-850 41 chr2L 1301749 1301753 chr2L 1302336 1302340 gypsy 4 587 0.0 16.5 8.2 0.4 591 chr2L 1301749 intergenic not near genes chr2L 1302044 intergenic not near genes chr2L 1302340 intergenic not near genes chr2L_4_1300001 chr2L_1300001 RAL-850 42 chr2L 1401679 1401689 chr2L 1401810 1401815 4 130 13.0 0.0 6.5 0.5 136 chr2L 1401679 intron lea - chr2L 1401747 intron lea - chr2L 1401815 intron lea - chr2L_4_1400001 chr2L_1400001 RAL-850 43 chr2L 1407920 1407932 chr2L 1408068 1408080 5 148 22.0 10.5 16.2 0.3 160 chr2L 1407920 intron lea - chr2L 1408000 intron lea - chr2L 1408080 intron lea - chr2L_5_1405001 chr2L_1405001 RAL-850 44 chr2L 1407935 1407953 chr2L 1408064 1408101 8 146 15.5 9.5 12.5 0.6 166 chr2L 1407935 intron lea - chr2L 1408018 intron lea - chr2L 1408101 intron lea - chr2L_8_1405001 chr2L_1405001 RAL-850 45 chr2L 1503385 1503452 chr2L 1503513 1503580 36 127 8.0 14.5 11.2 3.0 195 chr2L 1503385 intron CR44064 + chr2L 1503482 intron CR44064 + chr2L 1503580 5` UTR CR44064 + chr2L_36_1500001 chr2L_1500001 RAL-850 46 chr2L 1529013 1529089 chr2L 1529154 1529230 17 139 9.5 4.0 6.8 2.2 217 chr2L 1529013 intergenic not near genes chr2L 1529122 intergenic not near genes chr2L 1529230 intergenic not near genes chr2L_17_1525001 chr2L_1525001 RAL-850 47 chr2L 1570662 1570711 chr2L 1573570 1573633 F-element 23 2921 11.0 10.0 10.5 2.0 2971 chr2L 1570662 intron haf + chr2L 1572148 intron haf + chr2L 1573633 intron haf + chr2L_23_1570001 chr2L_1570001 RAL-850 48 chr2L 1580259 1580331 chr2L 1580517 1580589 29 257 0.0 5.0 2.5 8.3 330 chr2L 1580259 intron haf + chr2L 1580424 intron haf + chr2L 1580589 intron haf + chr2L_29_1580001 chr2L_1580001 RAL-850 49 chr2L 1628794 1628819 chr2L 1628933 1628958 6 139 5.0 3.5 4.2 1.2 164 chr2L 1628794 intergenic not near genes chr2L 1628876 intergenic not near genes chr2L 1628958 intergenic not near genes chr2L_6_1625001 chr2L_1625001 RAL-850 50 chr2L 1634716 1634764 chr2L 1634851 1634896 9 130 11.0 12.0 11.5 0.7 180 chr2L 1634716 intergenic not near genes chr2L 1634806 intergenic not near genes chr2L 1634896 intergenic not near genes chr2L_9_1630001 chr2L_1630001 RAL-850 51 chr2L 1661971 1662030 chr2L 1662106 1662173 17 138 7.5 3.0 5.2 2.7 202 chr2L 1661971 intron chinmo + chr2L 1662072 intron chinmo + chr2L 1662173 intron chinmo + chr2L_17_1660001 chr2L_1660001 RAL-850 52 chr2L 1669109 1669159 chr2L 1669373 1669423 18 264 0.0 14.0 7.0 2.2 314 chr2L 1669109 intron chinmo + chr2L 1669266 intron chinmo + chr2L 1669423 intron chinmo + chr2L_18_1665001 chr2L_1665001 RAL-850 53 chr2L 1678932 1678950 chr2L 1686447 1686464 blood 5 7515 22.5 8.0 15.2 0.3 7532 chr2L 1678932 intron chinmo + chr2L 1682698 intron chinmo + chr2L 1686464 intron chinmo + chr2L_5_1680001 chr2L_1680001 RAL-850 54 chr2L 1678953 1678998 chr2L 1686443 1686513 blood 25 7512 6.5 7.0 6.8 3.2 7560 chr2L 1678953 intron chinmo + chr2L 1682733 intron chinmo + chr2L 1686513 intron chinmo + chr2L_25_1680001 chr2L_1680001 RAL-850 55 chr2L 1711311 1711336 chr2L 1711685 1711710 mdg3 11 372 17.5 14.5 16.0 0.6 399 chr2L 1711311 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711510 3` UTR frtz - chr2L 1711710 3` UTR frtz - chr2L_11_1710001 chr2L_1710001 RAL-850 56 chr2L 1711342 1711380 chr2L 1711683 1711754 mdg3 18 362 8.5 14.0 11.2 1.5 412 chr2L 1711342 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711548 3` UTR frtz - chr2L 1711754 exon frtz - chr2L_18_1710001 chr2L_1710001 RAL-850 57 chr2L 1721816 1721854 chr2L 1721950 1721977 16 129 0.0 15.5 7.8 1.8 161 chr2L 1721816 intron Rim2 - chr2L 1721896 intron Rim2 - chr2L 1721977 intron Rim2 - chr2L_16_1720001 chr2L_1720001 RAL-850 58 chr2L 1850320 1850391 chr2L 1850450 1850521 27 130 8.5 5.5 7.0 3.4 201 chr2L 1850320 intron wry + chr2L 1850420 intron wry + chr2L 1850521 intron wry + chr2L_27_1850001 chr2L_1850001 RAL-850 59 chr2L 1889777 1889839 chr2L 1890007 1890069 28 230 9.5 10.5 10.0 2.5 292 chr2L 1889777 intron CG7337 + chr2L 1889923 intron CG7337 + chr2L 1890069 intron CG7337 + chr2L_28_1885001 chr2L_1885001 RAL-850 60 chr2L 1889843 1889848 chr2L 1890003 1890078 5 201 8.0 9.5 8.8 0.5 235 chr2L 1889843 intron CG7337 + chr2L 1889960 intron CG7337 + chr2L 1890078 intron CG7337 + chr2L_5_1885001 chr2L_1885001 RAL-850 61 chr2L 1999520 1999581 chr2L 1999722 1999758 11 202 5.5 7.5 6.5 1.5 238 chr2L 1999520 intron CG33543 - chr2L 1999639 intron CG33543 - chr2L 1999758 intron CG33543 - chr2L_11_1995001 chr2L_1995001 RAL-850 62 chr2L 2007819 2007863 chr2L 2007977 2008021 10 158 6.0 14.0 10.0 0.9 202 chr2L 2007819 intergenic CR45712 + chr2L 2007920 intergenic CR45712 +,Nplp4 + chr2L 2008021 intergenic CR45712 +,Nplp4 + chr2L_10_2005001 chr2L_2005001 RAL-850 63 chr2L 2073311 2073353 chr2L 2073434 2073454 17 119 17.5 17.0 17.2 0.9 143 chr2L 2073311 intron dpr3 - chr2L 2073382 intron dpr3 - chr2L 2073454 intron dpr3 - chr2L_17_2070001 chr2L_2070001 RAL-850 64 chr2L 2100388 2100403 chr2L 2109550 2109550 roo 7 9166 12.0 10.0 11.0 0.6 9162 chr2L 2100388 intron dpr3 - chr2L 2104969 intron dpr3 - chr2L 2109550 intron dpr3 - chr2L_7_2100001 chr2L_2100001 RAL-850 65 chr2L 2112071 2112140 chr2L 2119777 2119838 opus 15 7702 6.0 11.5 8.8 1.5 7767 chr2L 2112071 intergenic not near genes chr2L 2115954 intergenic not near genes chr2L 2119838 intergenic not near genes chr2L_15_2115001 chr2L_2115001 RAL-850 66 chr2L 2145709 2145770 chr2L 2145845 2145906 27 136 13.0 14.5 13.8 1.8 197 chr2L 2145709 3` UTR CG11723 - chr2L 2145808 3` UTR CG11723 - chr2L 2145906 exon CG11723 - chr2L_27_2145001 chr2L_2145001 RAL-850 67 chr2L 2250369 2250444 chr2L 2251185 2251257 15 815 9.5 0.0 4.8 2.6 888 chr2L 2250369 intergenic Ser12 - chr2L 2250813 exon Ser12 - chr2L 2251257 exon Ser12 - chr2L_15_2250001 chr2L_2250001 RAL-850 68 chr2L 2261652 2261695 chr2L 2261779 2261822 17 127 1.5 13.0 7.2 2.1 170 chr2L 2261652 intergenic not near genes chr2L 2261737 intergenic not near genes chr2L 2261822 intergenic not near genes chr2L_17_2260001 chr2L_2260001 RAL-850 69 chr2L 2294024 2294070 chr2L 2299245 2299304 copia 18 5242 8.5 12.0 10.2 1.6 5280 chr2L 2294024 intergenic not near genes chr2L 2296664 intergenic not near genes chr2L 2299304 intergenic not near genes chr2L_18_2295001 chr2L_2295001 RAL-850 70 chr2L 2317071 2317132 chr2L 2317292 2317352 17 220 40.5 33.5 37.0 0.4 281 chr2L 2317071 intron,intron CG9967 -,eys + chr2L 2317212 intron,intron CG9967 -,eys + chr2L 2317352 intron,intron CG9967 -,eys + chr2L_17_2315001 chr2L_2315001 RAL-850 71 chr2L 2392109 2392181 chr2L 2392269 2392341 19 160 7.5 6.5 7.0 2.4 232 chr2L 2392109 5` UTR VGlut + chr2L 2392225 intron VGlut + chr2L 2392341 intron VGlut + chr2L_19_2390001 chr2L_2390001 RAL-850 72 chr2L 2402266 2402336 chr2L 2402427 2402497 19 161 10.0 6.5 8.2 2.1 231 chr2L 2402266 exon VGlut + chr2L 2402382 intron VGlut + chr2L 2402497 intron VGlut + chr2L_19_2400001 chr2L_2400001 RAL-850 73 chr2L 2427329 2427385 chr2L 2427465 2427521 14 135 12.5 6.0 9.2 1.4 192 chr2L 2427329 3` UTR CR44912 - chr2L 2427425 3` UTR CR44912 - chr2L 2427521 3` UTR CR44912 - chr2L_14_2425001 chr2L_2425001 RAL-850 74 chr2L 2439232 2439279 chr2L 2439359 2439405 15 121 18.5 18.5 18.5 0.8 173 chr2L 2439232 intron dpp + chr2L 2439318 intron dpp + chr2L 2439405 intron dpp + chr2L_15_2435001 chr2L_2435001 RAL-850 75 chr2L 2495094 2495109 chr2L 2495221 2495236 7 125 27.0 13.5 20.2 0.3 142 chr2L 2495094 intron oaf + chr2L 2495165 intron oaf + chr2L 2495236 intron oaf + chr2L_7_2495001 chr2L_2495001 RAL-850 76 chr2L 2495116 2495163 chr2L 2495213 2495288 25 123 9.5 11.5 10.5 2.2 172 chr2L 2495116 intron oaf + chr2L 2495202 intron oaf + chr2L 2495288 intron oaf + chr2L_25_2495001 chr2L_2495001 RAL-850 77 chr2L 2497595 2497615 chr2L 2497721 2497741 12 126 7.0 10.0 8.5 1.3 146 chr2L 2497595 3` UTR oaf + chr2L 2497668 3` UTR oaf + chr2L 2497741 3` UTR oaf + chr2L_12_2495001 chr2L_2495001 RAL-850 78 chr2L 2504182 2504235 chr2L 2504310 2504363 27 128 9.0 13.0 11.0 2.2 181 chr2L 2504182 intergenic not near genes chr2L 2504272 intergenic not near genes chr2L 2504363 intergenic not near genes chr2L_27_2500001 chr2L_2500001 RAL-850 79 chr2L 2557152 2557215 chr2L 2557268 2557341 5 121 5.5 7.0 6.2 0.7 189 chr2L 2557152 intergenic not near genes chr2L 2557246 intergenic not near genes chr2L 2557341 intergenic not near genes chr2L_5_2555001 chr2L_2555001 RAL-850 80 chr2L 2565495 2565563 chr2L 2571613 2571681 297 12 6118 7.5 7.0 7.2 1.5 6186 chr2L 2565495 exon Cyp309a2 - chr2L 2568588 intron Cyp309a2 - chr2L 2571681 exon Cyp309a2 - chr2L_12_2565001 chr2L_2565001 RAL-850 81 chr2L 2617991 2617999 chr2L 2618120 2618128 5 129 22.5 4.5 13.5 0.3 137 chr2L 2617991 intergenic not near genes chr2L 2618060 intergenic not near genes chr2L 2618128 intergenic not near genes chr2L_5_2615001 chr2L_2615001 RAL-850 82 chr2L 2618005 2618048 chr2L 2618119 2618176 12 126 12.5 5.0 8.8 1.2 171 chr2L 2618005 intergenic not near genes chr2L 2618090 intergenic not near genes chr2L 2618176 intergenic not near genes chr2L_12_2615001 chr2L_2615001 RAL-850 83 chr2L 2661158 2661172 chr2L 2663046 2663049 I-element 4 1884 22.5 8.5 15.5 0.2 1891 chr2L 2661158 intergenic not near genes chr2L 2662104 intergenic not near genes chr2L 2663049 intergenic not near genes chr2L_4_2660001 chr2L_2660001 RAL-850 84 chr2L 2661178 2661227 chr2L 2663031 2663085 I-element 21 1861 9.0 4.5 6.8 2.7 1907 chr2L 2661178 intergenic not near genes chr2L 2662132 intergenic not near genes chr2L 2663085 intergenic not near genes chr2L_21_2660001 chr2L_2660001 RAL-850 85 chr2L 2672974 2673051 chr2L 2673285 2673328 10 308 0.0 0.0 0.0 10.0 354 chr2L 2672974 intergenic not near genes chr2L 2673151 intergenic not near genes chr2L 2673328 intergenic not near genes chr2L_10_2670001 chr2L_2670001 RAL-850 86 chr2L 2679995 2680021 chr2L 2680141 2680167 8 146 15.0 5.0 10.0 0.7 172 chr2L 2679995 intron CG31690 + chr2L 2680081 intron CG31690 + chr2L 2680167 intron CG31690 + chr2L_8_2680001 chr2L_2680001 RAL-850 87 chr2L 2680023 2680063 chr2L 2680139 2680209 17 144 8.5 5.0 6.8 2.2 186 chr2L 2680023 intron CG31690 + chr2L 2680116 intron CG31690 + chr2L 2680209 intron CG31690 + chr2L_17_2680001 chr2L_2680001 RAL-850 88 chr2L 2698804 2698894 chr2L 2698952 2699031 31 129 0.5 6.0 3.2 7.4 227 chr2L 2698804 intron CG31690 + chr2L 2698918 intron CG31690 + chr2L 2699031 intron CG31690 + chr2L_31_2695001 chr2L_2695001 RAL-850 89 chr2L 2702936 2703006 chr2L 2703187 2703257 24 244 11.0 7.0 9.0 2.4 321 chr2L 2702936 intron CG31690 + chr2L 2703096 intron CG31690 + chr2L 2703257 intron CG31690 + chr2L_24_2700001 chr2L_2700001 RAL-850 90 chr2L 2772578 2772617 chr2L 2779212 2779251 297 9 6634 11.5 17.0 14.2 0.6 6673 chr2L 2772578 3` UTR Syt1 - chr2L 2775914 intron Syt1 - chr2L 2779251 3` UTR Syt1 - chr2L_9_2775001 chr2L_2775001 RAL-850 91 chr2L 2780137 2780184 chr2L 2780276 2780323 26 139 14.0 10.5 12.2 2.0 186 chr2L 2780137 3` UTR Syt1 - chr2L 2780230 3` UTR Syt1 - chr2L 2780323 3` UTR Syt1 - chr2L_26_2780001 chr2L_2780001 RAL-850 92 chr2L 2782862 2782933 chr2L 2782990 2783060 21 122 9.0 0.5 4.8 3.6 198 chr2L 2782862 intron Syt1 - chr2L 2782961 intron Syt1 - chr2L 2783060 3` UTR Syt1 - chr2L_21_2780001 chr2L_2780001 RAL-850 93 chr2L 2793900 2793962 chr2L 2794030 2794092 25 128 7.0 6.5 6.8 3.2 192 chr2L 2793900 5` UTR Syt1 - chr2L 2793996 intron Syt1 - chr2L 2794092 intron Syt1 - chr2L_25_2790001 chr2L_2790001 RAL-850 94 chr2L 2800563 2800582 chr2L 2800696 2800715 14 133 16.0 0.0 8.0 1.6 152 chr2L 2800563 intergenic not near genes chr2L 2800639 intergenic not near genes chr2L 2800715 intergenic not near genes chr2L_14_2800001 chr2L_2800001 RAL-850 95 chr2L 2826491 2826498 chr2L 2826633 2826640 4 142 21.0 8.5 14.8 0.3 149 chr2L 2826491 intron Duox - chr2L 2826566 intron Duox - chr2L 2826640 intron Duox - chr2L_4_2825001 chr2L_2825001 RAL-850 96 chr2L 2826500 2826510 chr2L 2826631 2826652 5 139 17.0 8.5 12.8 0.4 152 chr2L 2826500 intron Duox - chr2L 2826576 intron Duox - chr2L 2826652 intron Duox - chr2L_5_2825001 chr2L_2825001 RAL-850 97 chr2L 2826519 2826575 chr2L 2826629 2826704 16 134 3.5 8.0 5.8 2.4 185 chr2L 2826519 intron Duox - chr2L 2826612 intron Duox - chr2L 2826704 intron Duox - chr2L_16_2825001 chr2L_2825001 RAL-850 98 chr2L 2873430 2873467 chr2L 2873558 2873595 11 128 0.0 18.5 9.2 1.1 165 chr2L 2873430 intron CG31694 - chr2L 2873512 intron CG31694 - chr2L 2873595 intron CG31694 - chr2L_11_2870001 chr2L_2870001 RAL-850 99 chr2L 2885326 2885393 chr2L 2885453 2885520 31 127 7.5 7.5 7.5 3.6 194 chr2L 2885326 intron NTPase - chr2L 2885423 intron NTPase - chr2L 2885520 intron NTPase - chr2L_31_2885001 chr2L_2885001 RAL-850 100 chr2L 2894299 2894364 chr2L 2895036 2895095 35 733 6.0 9.0 7.5 4.1 796 chr2L 2894299 intron lilli + chr2L 2894697 intron lilli + chr2L 2895095 intron lilli + chr2L_35_2890001 chr2L_2890001 RAL-850 101 chr2L 2933263 2933325 chr2L 2935490 2935544 pogo 30 2223 7.0 11.5 9.2 2.9 2281 chr2L 2933263 intron lilli + chr2L 2934404 intron lilli + chr2L 2935544 intron lilli + chr2L_30_2930001 chr2L_2930001 RAL-850 102 chr2L 2937371 2937448 chr2L 2937499 2937575 23 127 8.0 6.5 7.2 2.8 204 chr2L 2937371 intron lilli + chr2L 2937473 intron lilli + chr2L 2937575 intron lilli + chr2L_23_2935001 chr2L_2935001 RAL-850 103 chr2L 3072989 3073054 chr2L 3078242 3078304 copia 27 5253 7.0 10.5 8.8 2.8 5315 chr2L 3072989 intron toc - chr2L 3075646 intron toc - chr2L 3078304 intron toc - chr2L_27_3075001 chr2L_3075001 RAL-850 104 chr2L 3108824 3108897 chr2L 3108951 3109024 30 127 7.0 7.5 7.2 3.7 200 chr2L 3108824 exon toc - chr2L 3108924 intron toc - chr2L 3109024 intron toc - chr2L_30_3105001 chr2L_3105001 RAL-850 105 chr2L 3193789 3193847 chr2L 3193925 3193983 28 136 9.5 11.0 10.2 2.5 194 chr2L 3193789 intron CG34393 - chr2L 3193886 intron CG34393 - chr2L 3193983 intron CG34393 - chr2L_28_3190001 chr2L_3190001 RAL-850 106 chr2L 3201991 3202029 chr2L 3202305 3202343 23 312 20.0 5.0 12.5 1.7 352 chr2L 3201991 intergenic not near genes chr2L 3202167 intergenic not near genes chr2L 3202343 intergenic not near genes chr2L_23_3200001 chr2L_3200001 RAL-850 107 chr2L 3202693 3202741 chr2L 3210170 3210220 mdg1 17 7479 10.5 0.0 5.2 2.7 7527 chr2L 3202693 intergenic not near genes chr2L 3206456 intergenic not near genes chr2L 3210220 intergenic CR45336 + chr2L_17_3205001 chr2L_3205001 RAL-850 108 chr2L 3251464 3251515 chr2L 3259079 3259130 springer 20 7614 7.0 6.0 6.5 2.7 7666 chr2L 3251464 intergenic not near genes chr2L 3255297 intergenic not near genes chr2L 3259130 intergenic not near genes chr2L_20_3255001 chr2L_3255001 RAL-850 109 chr2L 3272922 3272967 chr2L 3273048 3273093 27 126 0.0 7.5 3.8 5.6 171 chr2L 3272922 intergenic not near genes chr2L 3273008 intergenic not near genes chr2L 3273093 intergenic not near genes chr2L_27_3270001 chr2L_3270001 RAL-850 110 chr2L 3291205 3291221 chr2L 3291335 3291351 6 130 20.5 15.0 17.8 0.3 146 chr2L 3291205 intergenic CG9664 - chr2L 3291278 3` UTR CG9664 - chr2L 3291351 3` UTR CG9664 - chr2L_6_3290001 chr2L_3290001 RAL-850 111 chr2L 3291222 3291269 chr2L 3291332 3291369 16 126 11.5 14.5 13.0 1.1 147 chr2L 3291222 intergenic CG9664 - chr2L 3291296 3` UTR CG9664 - chr2L 3291369 3` UTR CG9664 - chr2L_16_3290001 chr2L_3290001 RAL-850 112 chr2L 3366967 3367040 chr2L 3367167 3367235 38 198 5.5 11.0 8.2 4.1 268 chr2L 3366967 intron CG34394 - chr2L 3367101 intron CG34394 - chr2L 3367235 intron CG34394 - chr2L_38_3365001 chr2L_3365001 RAL-850 113 chr2L 3376872 3376875 chr2L 3376998 3377002 4 127 0.0 23.5 11.8 0.3 130 chr2L 3376872 intergenic Ptpa +,CG9662 - chr2L 3376937 intergenic Ptpa +,CG9662 - chr2L 3377002 5` UTR Ptpa + chr2L_4_3375001 chr2L_3375001 RAL-850 114 chr2L 3388552 3388628 chr2L 3388843 3388919 pogo 24 291 6.0 8.5 7.2 2.9 367 chr2L 3388552 intergenic CG42460 - chr2L 3388736 intergenic CG42460 - chr2L 3388919 intergenic CG42460 -,CR44791 + chr2L_24_3385001 chr2L_3385001 RAL-850 115 chr2L 3393736 3393804 chr2L 3393871 3393933 21 124 4.0 7.0 5.5 3.2 197 chr2L 3393736 intergenic not near genes chr2L 3393834 intergenic not near genes chr2L 3393933 intergenic not near genes chr2L_21_3390001 chr2L_3390001 RAL-850 116 chr2L 3394976 3395048 chr2L 3395108 3395180 35 130 8.0 11.0 9.5 3.3 204 chr2L 3394976 intergenic not near genes chr2L 3395078 intergenic not near genes chr2L 3395180 intergenic not near genes chr2L_35_3395001 chr2L_3395001 RAL-850 117 chr2L 3526463 3526478 chr2L 3526593 3526608 8 128 21.0 12.0 16.5 0.5 145 chr2L 3526463 exon CG8852 + chr2L 3526536 exon CG8852 + chr2L 3526608 exon CG8852 + chr2L_8_3525001 chr2L_3525001 RAL-850 118 chr2L 3526482 3526532 chr2L 3526587 3526662 21 124 7.5 11.0 9.2 2.1 180 chr2L 3526482 exon CG8852 + chr2L 3526572 exon CG8852 + chr2L 3526662 exon CG8852 + chr2L_21_3525001 chr2L_3525001 RAL-850 119 chr2L 3548536 3548612 chr2L 3548665 3548741 31 129 3.5 6.0 4.8 5.3 205 chr2L 3548536 intergenic drm + chr2L 3548638 intergenic drm + chr2L 3548741 intergenic drm + chr2L_31_3545001 chr2L_3545001 RAL-850 120 chr2L 3575383 3575400 chr2L 3575546 3575560 5 162 19.0 11.0 15.0 0.3 177 chr2L 3575383 5` UTR CR43822 + chr2L 3575472 5` UTR CR43822 + chr2L 3575560 5` UTR CR43822 + chr2L_5_3575001 chr2L_3575001 RAL-850 121 chr2L 3575401 3575451 chr2L 3575538 3575606 24 153 8.0 7.5 7.8 2.7 205 chr2L 3575401 5` UTR CR43822 + chr2L 3575504 5` UTR CR43822 + chr2L 3575606 5` UTR CR43822 + chr2L_24_3575001 chr2L_3575001 RAL-850 122 chr2L 3632240 3632259 chr2L 3632365 3632386 7 127 0.5 0.0 0.2 5.8 146 chr2L 3632240 intron for - chr2L 3632313 intron for - chr2L 3632386 intron for - chr2L_7_3630001 chr2L_3630001 RAL-850 123 chr2L 3649754 3649760 chr2L 3655006 3655012 copia 4 5252 0.0 11.5 5.8 0.6 5258 chr2L 3649754 intron for - chr2L 3652383 intron for - chr2L 3655012 intron for - chr2L_4_3650001 chr2L_3650001 RAL-850 124 chr2L 3649763 3649807 chr2L 3655005 3655059 copia 16 5250 0.0 11.5 5.8 2.4 5296 chr2L 3649763 intron for - chr2L 3652411 intron for - chr2L 3655059 intron for - chr2L_16_3650001 chr2L_3650001 RAL-850 125 chr2L 3663286 3663342 chr2L 3663415 3663471 33 128 7.5 12.5 10.0 3.0 185 chr2L 3663286 5` UTR CG34340 + chr2L 3663378 intron CG34340 + chr2L 3663471 intron CG34340 + chr2L_33_3660001 chr2L_3660001 RAL-850 126 chr2L 3685978 3686057 chr2L 3686116 3686191 20 136 1.5 5.0 3.2 4.8 213 chr2L 3685978 intron CG34340 + chr2L 3686084 intron CG34340 + chr2L 3686191 intron CG34340 + chr2L_20_3685001 chr2L_3685001 RAL-850 127 chr2L 3784768 3784872 chr2L 3785667 3785800 11 915 23.5 3.0 13.2 0.8 1032 chr2L 3784768 intergenic CG31960 + chr2L 3785284 exon CG31960 + chr2L 3785800 5` UTR CG31958 + chr2L_11_3785001 chr2L_3785001 RAL-850 128 chr2L 3784703 3784732 chr2L 3785597 3785639 15 892 37.0 12.5 24.8 0.6 936 chr2L 3784703 intergenic CG31960 + chr2L 3785171 exon CG31960 + chr2L 3785639 intergenic CG31960 +,CG31958 + chr2L_15_3785001 chr2L_3785001 RAL-850 129 chr2L 3785670 3785677 chr2L 3785806 3785813 5 135 0.0 6.0 3.0 1.2 143 chr2L 3785670 intergenic CG31960 +,CG31958 + chr2L 3785742 5` UTR CG31958 + chr2L 3785813 5` UTR CG31958 + chr2L_5_3785001 chr2L_3785001 RAL-850 130 chr2L 3784737 3784776 chr2L 3786362 3786383 4 1612 36.5 30.5 33.5 0.1 1646 chr2L 3784737 intergenic CG31960 + chr2L 3785560 3` UTR CG31960 + chr2L 3786383 intergenic CG31958 + chr2L_4_3785001 chr2L_3785001 RAL-850 131 chr2L 3818985 3819018 chr2L 3819117 3819150 17 131 15.5 0.0 7.8 1.9 165 chr2L 3818985 intergenic CR44077 + chr2L 3819068 intergenic not near genes chr2L 3819150 intergenic not near genes chr2L_17_3815001 chr2L_3815001 RAL-850 132 chr2L 3831797 3831863 chr2L 3831928 3831993 22 131 7.5 9.0 8.2 2.4 196 chr2L 3831797 intergenic not near genes chr2L 3831895 intergenic not near genes chr2L 3831993 intergenic not near genes chr2L_22_3830001 chr2L_3830001 RAL-850 133 chr2L 3884744 3884809 chr2L 3884871 3884936 25 127 5.5 1.5 3.5 5.6 192 chr2L 3884744 intron capu - chr2L 3884840 intron capu - chr2L 3884936 intron capu - chr2L_25_3880001 chr2L_3880001 RAL-850 134 chr2L 3906008 3906069 chr2L 3906188 3906189 19 183 7.0 11.0 9.0 1.9 181 chr2L 3906008 intron fred - chr2L 3906098 intron fred - chr2L 3906189 intron fred - chr2L_19_3905001 chr2L_3905001 RAL-850 135 chr2L 3936575 3936655 chr2L 3936705 3936785 18 130 6.5 3.5 5.0 3.0 210 chr2L 3936575 intron fred - chr2L 3936680 intron fred - chr2L 3936785 intron fred - chr2L_18_3935001 chr2L_3935001 RAL-850 136 chr2L 3943753 3943817 chr2L 3943894 3943958 14 141 8.5 5.0 6.8 1.8 205 chr2L 3943753 intron fred - chr2L 3943856 intron fred - chr2L 3943958 intron fred - chr2L_14_3940001 chr2L_3940001 RAL-850 137 chr2L 4001641 4001674 chr2L 4001789 4001822 5 148 3.5 10.5 7.0 0.6 181 chr2L 4001641 intergenic CR45344 + chr2L 4001732 intergenic CR45344 + chr2L 4001822 intergenic CR45344 + chr2L_5_4000001 chr2L_4000001 RAL-850 138 chr2L 4027663 4027690 chr2L 4027786 4027816 5 125 6.0 12.5 9.2 0.5 153 chr2L 4027663 intergenic not near genes chr2L 4027740 intergenic not near genes chr2L 4027816 intergenic not near genes chr2L_5_4025001 chr2L_4025001 RAL-850 139 chr2L 4037750 4037803 chr2L 4037887 4037940 20 137 6.0 5.0 5.5 3.1 190 chr2L 4037750 intron ed + chr2L 4037845 intron ed + chr2L 4037940 intron ed + chr2L_20_4035001 chr2L_4035001 RAL-850 140 chr2L 4066012 4066051 chr2L 4068873 4068926 Juan 18 2872 9.5 11.0 10.2 1.6 2914 chr2L 4066012 intron ed + chr2L 4067469 intron ed + chr2L 4068926 intron ed + chr2L_18_4065001 chr2L_4065001 RAL-850 141 chr2L 4109917 4109935 chr2L 4110051 4110069 10 134 7.0 15.0 11.0 0.8 152 chr2L 4109917 intron ed + chr2L 4109993 intron ed + chr2L 4110069 intron ed + chr2L_10_4105001 chr2L_4105001 RAL-850 142 chr2L 4125210 4125276 chr2L 4125355 4125431 20 153 0.5 7.5 4.0 4.0 221 chr2L 4125210 intergenic not near genes chr2L 4125320 intergenic not near genes chr2L 4125431 intergenic not near genes chr2L_20_4125001 chr2L_4125001 RAL-850 143 chr2L 4129629 4129663 chr2L 4129787 4129829 7 163 0.0 0.0 0.0 7.0 200 chr2L 4129629 intergenic not near genes chr2L 4129729 intergenic not near genes chr2L 4129829 intergenic not near genes chr2L_7_4125001 chr2L_4125001 RAL-850 144 chr2L 4150572 4150651 chr2L 4150702 4150774 22 125 3.0 4.0 3.5 4.9 202 chr2L 4150572 exon CG2955 + chr2L 4150673 exon CG2955 + chr2L 4150774 exon CG2955 + chr2L_22_4150001 chr2L_4150001 RAL-850 145 chr2L 4160468 4160526 chr2L 4160919 4160987 21 458 6.5 3.0 4.8 3.6 519 chr2L 4160468 intergenic not near genes chr2L 4160728 intergenic not near genes chr2L 4160987 intergenic not near genes chr2L_21_4160001 chr2L_4160001 RAL-850 146 chr2L 4184432 4184504 chr2L 4184801 4184873 24 369 4.0 7.5 5.8 3.5 441 chr2L 4184432 intergenic not near genes chr2L 4184652 intergenic not near genes chr2L 4184873 intergenic not near genes chr2L_24_4180001 chr2L_4180001 RAL-850 147 chr2L 4265609 4265686 chr2L 4265749 4265816 17 134 3.0 2.0 2.5 4.9 207 chr2L 4265609 intergenic not near genes chr2L 4265712 intergenic not near genes chr2L 4265816 intergenic not near genes chr2L_17_4265001 chr2L_4265001 RAL-850 148 chr2L 4266342 4266398 chr2L 4266483 4266554 17 154 7.5 7.0 7.2 2.1 212 chr2L 4266342 intergenic not near genes chr2L 4266448 intergenic not near genes chr2L 4266554 intergenic not near genes chr2L_17_4265001 chr2L_4265001 RAL-850 149 chr2L 4492420 4492495 chr2L 4492550 4492624 33 123 8.5 9.0 8.8 3.4 204 chr2L 4492420 intron dp - chr2L 4492522 intron dp - chr2L 4492624 intron dp - chr2L_33_4490001 chr2L_4490001 RAL-850 150 chr2L 4601664 4601726 chr2L 4609155 4609217 mdg1 33 7490 11.0 10.0 10.5 2.9 7553 chr2L 4601664 intron dp - chr2L 4605440 intron dp - chr2L 4609217 intron dp - chr2L_33_4605001 chr2L_4605001 RAL-850 151 chr2L 4622970 4623024 chr2L 4624791 4624864 23 1839 41.0 22.5 31.8 0.7 1894 chr2L 4622970 intergenic not near genes chr2L 4623917 intergenic not near genes chr2L 4624864 intergenic not near genes chr2L_23_4620001 chr2L_4620001 RAL-850 152 chr2L 4622517 4622585 chr2L 4624748 4624816 27 2232 54.5 27.0 40.8 0.6 2299 chr2L 4622517 intergenic not near genes chr2L 4623666 intergenic not near genes chr2L 4624816 intergenic not near genes chr2L_27_4620001 chr2L_4620001 RAL-850 153 chr2L 4661795 4661851 chr2L 4669425 4669466 opus 13 7627 5.5 14.5 10.0 1.2 7671 chr2L 4661795 intergenic not near genes chr2L 4665630 intergenic not near genes chr2L 4669466 intergenic not near genes chr2L_13_4665001 chr2L_4665001 RAL-850 154 chr2L 4771101 4771171 chr2L 4771233 4771308 17 132 10.0 9.5 9.8 1.6 207 chr2L 4771101 intron CG15630 - chr2L 4771204 intron CG15630 - chr2L 4771308 intron CG15630 - chr2L_17_4770001 chr2L_4770001 RAL-850 155 chr2L 4774385 4774443 chr2L 4775046 4775082 13 656 5.0 6.5 5.8 1.9 697 chr2L 4774385 intron CG15630 - chr2L 4774734 intron CG15630 - chr2L 4775082 intron CG15630 - chr2L_13_4770001 chr2L_4770001 RAL-850 156 chr2L 4781123 4781158 chr2L 4781268 4781303 15 144 11.5 7.0 9.2 1.5 180 chr2L 4781123 intron CG15630 - chr2L 4781213 intron CG15630 - chr2L 4781303 intron CG15630 - chr2L_15_4780001 chr2L_4780001 RAL-850 157 chr2L 4826225 4826276 chr2L 4826437 4826488 20 212 9.0 7.0 8.0 2.2 263 chr2L 4826225 intron CG15628 + chr2L 4826356 intron CG15628 + chr2L 4826488 exon CG15628 + chr2L_20_4825001 chr2L_4825001 RAL-850 158 chr2L 4841028 4841035 chr2L 4841154 4841161 4 126 30.0 14.0 22.0 0.2 133 chr2L 4841028 intron CG12194 + chr2L 4841094 intron CG12194 + chr2L 4841161 exon CG12194 + chr2L_4_4840001 chr2L_4840001 RAL-850 159 chr2L 4841045 4841103 chr2L 4841148 4841214 21 122 18.0 14.0 16.0 1.2 169 chr2L 4841045 intron CG12194 + chr2L 4841130 intron CG12194 + chr2L 4841214 3` UTR CG12194 + chr2L_21_4840001 chr2L_4840001 RAL-850 160 chr2L 4855755 4855824 chr2L 4856014 4856066 29 257 7.0 8.0 7.5 3.4 311 chr2L 4855755 intron pog + chr2L 4855910 intron pog + chr2L 4856066 intron pog + chr2L_29_4855001 chr2L_4855001 RAL-850 161 chr2L 4918128 4918200 chr2L 4923251 4923361 jockey 28 5155 2.5 0.0 1.2 12.7 5233 chr2L 4918128 intron hoe1 - chr2L 4920744 intron hoe1 - chr2L 4923361 intron hoe1 - chr2L_28_4920001 chr2L_4920001 RAL-850 162 chr2L 4929092 4929138 chr2L 4929227 4929263 16 133 10.0 8.5 9.2 1.6 171 chr2L 4929092 intron hoe1 - chr2L 4929178 intron hoe1 - chr2L 4929263 intron hoe1 - chr2L_16_4925001 chr2L_4925001 RAL-850 163 chr2L 4953464 4953490 chr2L 4953755 4953771 pogo 8 290 18.0 2.0 10.0 0.7 307 chr2L 4953464 intergenic Jon25Bii - chr2L 4953618 intergenic Jon25Bii - chr2L 4953771 intergenic not near genes chr2L_8_4950001 chr2L_4950001 RAL-850 164 chr2L 5027919 5027984 chr2L 5028053 5028118 24 133 0.0 14.5 7.2 2.9 199 chr2L 5027919 intron vkg - chr2L 5028018 intron vkg - chr2L 5028118 5` UTR vkg - chr2L_24_5025001 chr2L_5025001 RAL-850 165 chr2L 5084996 5085069 chr2L 5085138 5085198 16 140 0.0 8.5 4.2 3.1 202 chr2L 5084996 intron pgant5 - chr2L 5085097 intron pgant5 - chr2L 5085198 intron pgant5 - chr2L_16_5085001 chr2L_5085001 RAL-850 166 chr2L 5117247 5117324 chr2L 5117379 5117456 39 132 6.5 10.5 8.5 4.1 209 chr2L 5117247 intron Msp300 + chr2L 5117352 intron Msp300 + chr2L 5117456 intron Msp300 + chr2L_39_5115001 chr2L_5115001 RAL-850 167 chr2L 5147695 5147754 chr2L 5147955 5148036 34 277 5.5 5.0 5.2 5.5 341 chr2L 5147695 intron Msp300 + chr2L 5147866 intron Msp300 + chr2L 5148036 intron Msp300 + chr2L_34_5145001 chr2L_5145001 RAL-850 168 chr2L 5200539 5200616 chr2L 5215737 5215814 27 15211 88.5 69.0 78.8 0.3 15275 chr2L 5200539 exon Msp300 + chr2L 5208176 exon Cyp28d2 + chr2L 5215814 exon CG14034 - chr2L_27_5205001 chr2L_5205001 RAL-850 169 chr2L 5228576 5228585 chr2L 5228723 5228735 4 155 0.0 1.0 0.5 2.7 159 chr2L 5228576 intron tkv - chr2L 5228656 intron tkv - chr2L 5228735 intron tkv - chr2L_4_5225001 chr2L_5225001 RAL-850 170 chr2L 5269953 5270008 chr2L 5270076 5270136 41 127 16.5 7.5 12.0 3.2 183 chr2L 5269953 intron,exon tkv -,Cyp4ac3 + chr2L 5270044 intron,exon tkv -,Cyp4ac3 + chr2L 5270136 intron,exon tkv -,Cyp4ac3 + chr2L_41_5270001 chr2L_5270001 RAL-850 171 chr2L 5342730 5342792 chr2L 5345160 5345222 Doc 22 2430 8.5 5.0 6.8 2.8 2492 chr2L 5342730 intergenic CG12512 - chr2L 5343976 intergenic not near genes chr2L 5345222 intergenic not near genes chr2L_22_5340001 chr2L_5340001 RAL-850 172 chr2L 5449655 5449682 chr2L 5449805 5449806 8 145 13.5 0.0 6.8 1.0 151 chr2L 5449655 intergenic not near genes chr2L 5449730 intergenic not near genes chr2L 5449806 intergenic not near genes chr2L_8_5445001 chr2L_5445001 RAL-850 173 chr2L 5501398 5501470 chr2L 5501524 5501596 35 126 5.5 5.0 5.2 5.6 198 chr2L 5501398 intergenic not near genes chr2L 5501497 intergenic not near genes chr2L 5501596 intergenic not near genes chr2L_35_5500001 chr2L_5500001 RAL-850 174 chr2L 5509304 5509349 chr2L 5509452 5509497 22 148 11.0 0.0 5.5 3.4 193 chr2L 5509304 intergenic not near genes chr2L 5509400 intergenic not near genes chr2L 5509497 intergenic not near genes chr2L_22_5505001 chr2L_5505001 RAL-850 175 chr2L 5515166 5515230 chr2L 5515319 5515383 27 152 12.0 3.5 7.8 3.1 217 chr2L 5515166 intergenic not near genes chr2L 5515274 intergenic not near genes chr2L 5515383 intergenic not near genes chr2L_27_5515001 chr2L_5515001 RAL-850 176 chr2L 5592361 5592397 chr2L 5592491 5592527 10 130 2.5 9.5 6.0 1.4 166 chr2L 5592361 intergenic not near genes chr2L 5592444 intergenic not near genes chr2L 5592527 intergenic not near genes chr2L_10_5590001 chr2L_5590001 RAL-850 177 chr2L 5611296 5611348 chr2L 5611432 5611484 23 136 5.5 7.0 6.2 3.2 188 chr2L 5611296 intron CG14010 - chr2L 5611390 intron CG14010 - chr2L 5611484 intron CG14010 - chr2L_23_5610001 chr2L_5610001 RAL-850 178 chr2L 5625604 5625611 chr2L 5625710 5625715 7 116 1.5 9.0 5.2 1.1 111 chr2L 5625604 intergenic not near genes chr2L 5625660 intergenic not near genes chr2L 5625715 intergenic not near genes chr2L_7_5625001 chr2L_5625001 RAL-850 179 chr2L 5646645 5646678 chr2L 5646774 5646787 15 130 17.0 9.0 13.0 1.1 142 chr2L 5646645 intron CG31646 - chr2L 5646716 intron CG31646 - chr2L 5646787 intron CG31646 - chr2L_15_5645001 chr2L_5645001 RAL-850 180 chr2L 5666246 5666301 chr2L 5666384 5666441 7 133 7.5 6.0 6.8 0.9 195 chr2L 5666246 intron Hsp60C + chr2L 5666344 intron Hsp60C + chr2L 5666441 intron Hsp60C + chr2L_7_5665001 chr2L_5665001 RAL-850 181 chr2L 5686409 5686443 chr2L 5686541 5686575 14 132 5.0 13.5 9.2 1.4 166 chr2L 5686409 intergenic not near genes chr2L 5686492 intergenic not near genes chr2L 5686575 intergenic not near genes chr2L_14_5685001 chr2L_5685001 RAL-850 182 chr2L 5695828 5695889 chr2L 5695970 5696031 22 141 5.0 11.5 8.2 2.4 203 chr2L 5695828 intergenic not near genes chr2L 5695930 intergenic not near genes chr2L 5696031 intergenic not near genes chr2L_22_5695001 chr2L_5695001 RAL-850 183 chr2L 5698457 5698523 chr2L 5698586 5698591 31 127 5.5 7.5 6.5 4.1 134 chr2L 5698457 intergenic not near genes chr2L 5698524 intergenic not near genes chr2L 5698591 intergenic not near genes chr2L_31_5695001 chr2L_5695001 RAL-850 184 chr2L 5781480 5781560 chr2L 5782346 5782422 27 863 2.0 6.5 4.2 5.2 942 chr2L 5781480 intron CG9171 - chr2L 5781951 intron CG9171 - chr2L 5782422 intron CG9171 - chr2L_27_5780001 chr2L_5780001 RAL-850 185 chr2L 5827685 5827735 chr2L 5836727 5836793 roo 17 9057 9.0 6.5 7.8 1.9 9108 chr2L 5827685 intron TrissinR + chr2L 5832239 intron TrissinR + chr2L 5836793 intron TrissinR + chr2L_17_5830001 chr2L_5830001 RAL-850 186 chr2L 5878735 5878778 chr2L 5878841 5878903 11 118 16.5 13.0 14.8 0.7 168 chr2L 5878735 intron rau - chr2L 5878819 intron rau - chr2L 5878903 intron rau - chr2L_11_5875001 chr2L_5875001 RAL-850 187 chr2L 5922903 5922914 chr2L 5923032 5923042 6 126 11.0 16.5 13.8 0.4 139 chr2L 5922903 3` UTR CG9016 - chr2L 5922972 3` UTR CG9016 - chr2L 5923042 3` UTR CG9016 - chr2L_6_5920001 chr2L_5920001 RAL-850 188 chr2L 5946667 5946729 chr2L 5946800 5946862 19 132 13.5 10.0 11.8 1.5 195 chr2L 5946667 exon Gpdh + chr2L 5946764 intron Gpdh + chr2L 5946862 intron Gpdh + chr2L_19_5945001 chr2L_5945001 RAL-850 189 chr2L 6002415 6002463 chr2L 6002551 6002599 22 136 6.0 14.0 10.0 2.0 184 chr2L 6002415 3` UTR Tsp26A + chr2L 6002507 3` UTR Tsp26A + chr2L 6002599 3` UTR Tsp26A + chr2L_22_6000001 chr2L_6000001 RAL-850 190 chr2L 6075036 6075069 chr2L 6075178 6075211 15 142 4.0 0.0 2.0 5.0 175 chr2L 6075036 intergenic CR43801 - chr2L 6075124 intergenic CR43801 - chr2L 6075211 intergenic CR43801 - chr2L_15_6075001 chr2L_6075001 RAL-850 191 chr2L 6099193 6099214 chr2L 6099330 6099351 12 136 4.5 5.0 4.8 2.1 158 chr2L 6099193 intergenic CG9175 - chr2L 6099272 intergenic CG9175 - chr2L 6099351 intergenic CG9175 - chr2L_12_6095001 chr2L_6095001 RAL-850 192 chr2L 6100792 6100858 chr2L 6100926 6100930 29 131 11.5 0.0 5.8 4.3 138 chr2L 6100792 intron stai + chr2L 6100861 intron stai + chr2L 6100930 intron stai + chr2L_29_6100001 chr2L_6100001 RAL-850 193 chr2L 6106175 6106236 chr2L 6106315 6106376 22 140 10.0 3.5 6.8 2.8 201 chr2L 6106175 intron stai + chr2L 6106276 intron stai + chr2L 6106376 intron stai + chr2L_22_6105001 chr2L_6105001 RAL-850 194 chr2L 6108744 6108822 chr2L 6108876 6108953 18 131 5.5 4.5 5.0 3.0 209 chr2L 6108744 intron stai + chr2L 6108848 intron stai + chr2L 6108953 intron stai + chr2L_18_6105001 chr2L_6105001 RAL-850 195 chr2L 6130726 6130777 chr2L 6130861 6130911 8 134 10.5 0.0 5.2 1.3 185 chr2L 6130726 intergenic CG42730 -,tectonic -,CG9222 + chr2L 6130818 intergenic CG42730 -,tectonic -,CG9222 + chr2L 6130911 intergenic CG9222 +,CG42730 -,tectonic - chr2L_8_6130001 chr2L_6130001 RAL-850 196 chr2L 6136506 6136580 chr2L 6136653 6136727 21 147 3.0 6.5 4.8 3.6 221 chr2L 6136506 intergenic not near genes chr2L 6136616 intergenic not near genes chr2L 6136727 intergenic not near genes chr2L_21_6135001 chr2L_6135001 RAL-850 197 chr2L 6185407 6185471 chr2L 6185523 6185599 29 125 9.0 8.0 8.5 3.1 192 chr2L 6185407 intron CG34380 + chr2L 6185503 intron CG34380 + chr2L 6185599 intron CG34380 + chr2L_29_6185001 chr2L_6185001 RAL-850 198 chr2L 6227669 6227729 chr2L 6227803 6227863 33 133 7.5 9.0 8.2 3.6 194 chr2L 6227669 intergenic not near genes chr2L 6227766 intergenic not near genes chr2L 6227863 intergenic not near genes chr2L_33_6225001 chr2L_6225001 RAL-850 199 chr2L 6253572 6253635 chr2L 6253698 6253761 14 126 6.0 5.5 5.8 2.1 189 chr2L 6253572 intron Ddr + chr2L 6253666 intron Ddr + chr2L 6253761 intron Ddr + chr2L_14_6250001 chr2L_6250001 RAL-850 200 chr2L 6275531 6275608 chr2L 6276101 6276161 23 567 5.5 8.0 6.8 2.9 630 chr2L 6275531 intron Ddr + chr2L 6275846 intron Ddr + chr2L 6276161 intron Ddr + chr2L_23_6275001 chr2L_6275001 RAL-850 201 chr2L 6283893 6283976 chr2L 6284054 6284138 18 161 4.5 0.0 2.2 5.6 245 chr2L 6283893 intron Ddr + chr2L 6284016 intron Ddr + chr2L 6284138 intron Ddr + chr2L_18_6280001 chr2L_6280001 RAL-850 202 chr2L 6296365 6296430 chr2L 6296508 6296573 32 141 7.5 8.0 7.8 3.6 208 chr2L 6296365 intron Ddr + chr2L 6296469 intron Ddr + chr2L 6296573 intron Ddr + chr2L_32_6295001 chr2L_6295001 RAL-850 203 chr2L 6316292 6316318 chr2L 6316430 6316456 9 138 0.0 12.0 6.0 1.3 164 chr2L 6316292 intron Ddr + chr2L 6316374 intron Ddr + chr2L 6316456 intron Ddr + chr2L_9_6315001 chr2L_6315001 RAL-850 204 chr2L 6363106 6363119 chr2L 6366082 6366095 Burdock 8 2975 23.0 5.5 14.2 0.5 2989 chr2L 6363106 intergenic not near genes chr2L 6364600 intergenic not near genes chr2L 6366095 intergenic not near genes chr2L_8_6360001 chr2L_6360001 RAL-850 205 chr2L 6363124 6363180 chr2L 6366079 6366151 Burdock 31 2971 8.0 3.5 5.8 4.6 3027 chr2L 6363124 intergenic not near genes chr2L 6364638 intergenic not near genes chr2L 6366151 intergenic not near genes chr2L_31_6360001 chr2L_6360001 RAL-850 206 chr2L 6390113 6390127 chr2L 6390243 6390257 4 130 7.0 4.5 5.8 0.6 144 chr2L 6390113 intron CG42368 - chr2L 6390185 intron CG42368 - chr2L 6390257 intron CG42368 - chr2L_4_6390001 chr2L_6390001 RAL-850 207 chr2L 6426817 6426883 chr2L 6445127 6445161 roo 35 18308 7.5 9.5 8.5 3.7 18344 chr2L 6426817 3` UTR CG9527 - chr2L 6435989 intron CG9527 - chr2L 6445161 exon CG9527 - chr2L_35_6435001 chr2L_6435001 RAL-850 208 chr2L 6511883 6511953 chr2L 6512149 6512172 25 263 9.5 7.0 8.2 2.7 289 chr2L 6511883 intron CG31637 + chr2L 6512028 intron CG31637 + chr2L 6512172 intron CG31637 + chr2L_25_6510001 chr2L_6510001 RAL-850 209 chr2L 6544323 6544395 chr2L 6544465 6544537 38 142 6.0 6.5 6.2 5.3 214 chr2L 6544323 intron eya - chr2L 6544430 intron eya - chr2L 6544537 intron eya - chr2L_38_6540001 chr2L_6540001 RAL-850 210 chr2L 6552424 6552483 chr2L 6552597 6552653 11 169 6.0 10.0 8.0 1.2 229 chr2L 6552424 5` UTR CR44776 + chr2L 6552538 intergenic CR44776 + chr2L 6552653 intergenic CR44776 + chr2L_11_6550001 chr2L_6550001 RAL-850 211 chr2L 6590084 6590115 chr2L 6590177 6590242 14 115 10.5 1.0 5.8 2.1 158 chr2L 6590084 intron CG11319 - chr2L 6590163 intron CG11319 - chr2L 6590242 intron CG11319 - chr2L_14_6590001 chr2L_6590001 RAL-850 212 chr2L 6598073 6598148 chr2L 6599080 6599155 31 1004 8.0 8.0 8.0 3.4 1082 chr2L 6598073 intron CG11319 - chr2L 6598614 intron CG11319 - chr2L 6599155 intron CG11319 - chr2L_31_6595001 chr2L_6595001 RAL-850 213 chr2L 6626849 6626910 chr2L 6626976 6627045 25 134 10.0 14.0 12.0 1.9 196 chr2L 6626849 intron Oatp26F - chr2L 6626947 intron Oatp26F - chr2L 6627045 intron Oatp26F - chr2L_25_6625001 chr2L_6625001 RAL-850 214 chr2L 6655475 6655547 chr2L 6655887 6655959 27 405 7.5 12.0 9.8 2.5 484 chr2L 6655475 exon CG31633 - chr2L 6655717 exon CG31633 - chr2L 6655959 exon CG31633 - chr2L_27_6655001 chr2L_6655001 RAL-850 215 chr2L 6740684 6740750 chr2L 6740821 6740887 13 137 0.0 13.0 6.5 1.7 203 chr2L 6740684 intergenic TTLL3A - chr2L 6740786 intergenic not near genes chr2L 6740887 intergenic not near genes chr2L_13_6740001 chr2L_6740001 RAL-850 216 chr2L 6772544 6772592 chr2L 6772677 6772724 10 128 13.5 13.0 13.2 0.7 180 chr2L 6772544 intron CG11321 - chr2L 6772634 5` UTR CG11321 - chr2L 6772724 5` UTR CG11321 - chr2L_10_6770001 chr2L_6770001 RAL-850 217 chr2L 6799502 6799562 chr2L 6799639 6799690 14 135 9.5 4.0 6.8 1.8 188 chr2L 6799502 5` UTR CR43610 + chr2L 6799596 5` UTR CR43610 + chr2L 6799690 intergenic CR43610 +,CG17376 - chr2L_14_6795001 chr2L_6795001 RAL-850 218 chr2L 6818082 6818108 chr2L 6818221 6818232 12 136 7.0 8.5 7.8 1.4 150 chr2L 6818082 intergenic not near genes chr2L 6818157 intergenic not near genes chr2L 6818232 intergenic not near genes chr2L_12_6815001 chr2L_6815001 RAL-850 219 chr2L 6836456 6836528 chr2L 6836588 6836660 34 130 8.5 9.0 8.8 3.5 204 chr2L 6836456 intron sens-2 + chr2L 6836558 intron sens-2 + chr2L 6836660 intron sens-2 + chr2L_34_6835001 chr2L_6835001 RAL-850 220 chr2L 6850334 6850410 chr2L 6850467 6850543 19 133 4.0 7.5 5.8 2.8 209 chr2L 6850334 intergenic not near genes chr2L 6850438 intergenic not near genes chr2L 6850543 intergenic not near genes chr2L_19_6850001 chr2L_6850001 RAL-850 221 chr2L 6851465 6851530 chr2L 6851591 6851616 12 123 3.0 0.0 1.5 4.8 151 chr2L 6851465 intergenic not near genes chr2L 6851540 intergenic not near genes chr2L 6851616 intergenic not near genes chr2L_12_6850001 chr2L_6850001 RAL-850 222 chr2L 6876759 6876771 chr2L 6882979 6883011 diver 7 6231 22.0 8.5 15.2 0.4 6252 chr2L 6876759 intron Nlg2 + chr2L 6879885 intron Nlg2 + chr2L 6883011 intron Nlg2 + chr2L_7_6875001 chr2L_6875001 RAL-850 223 chr2L 6876772 6876809 chr2L 6882968 6882998 diver 15 6221 14.5 5.0 9.8 1.4 6226 chr2L 6876772 intron Nlg2 + chr2L 6879885 intron Nlg2 + chr2L 6882998 intron Nlg2 + chr2L_15_6875001 chr2L_6875001 RAL-850 224 chr2L 6891395 6891468 chr2L 6891543 6891610 25 148 4.5 7.0 5.8 3.7 215 chr2L 6891395 intron Nlg2 + chr2L 6891502 intron Nlg2 + chr2L 6891610 intron Nlg2 + chr2L_25_6890001 chr2L_6890001 RAL-850 225 chr2L 6949086 6949130 chr2L 6949217 6949261 4 131 2.5 0.0 1.2 1.8 175 chr2L 6949086 intergenic Gas41 -,ihog - chr2L 6949174 intergenic Gas41 -,ihog - chr2L 6949261 intergenic Gas41 -,ihog - chr2L_4_6945001 chr2L_6945001 RAL-850 226 chr2L 6969226 6969301 chr2L 6969356 6969414 35 125 9.5 12.0 10.8 3.0 188 chr2L 6969226 3` UTR snRNP-U1-70K - chr2L 6969320 3` UTR snRNP-U1-70K - chr2L 6969414 3` UTR snRNP-U1-70K - chr2L_35_6965001 chr2L_6965001 RAL-850 227 chr2L 7082852 7082880 chr2L 7082989 7083017 14 137 14.5 13.0 13.8 0.9 165 chr2L 7082852 intron Pvf2 - chr2L 7082934 intron Pvf2 - chr2L 7083017 intron Pvf2 - chr2L_14_7080001 chr2L_7080001 RAL-850 228 chr2L 7111705 7111783 chr2L 7111840 7111918 15 131 4.5 4.5 4.5 2.7 213 chr2L 7111705 intron Pvf3 - chr2L 7111812 intron Pvf3 - chr2L 7111918 intron Pvf3 - chr2L_15_7110001 chr2L_7110001 RAL-850 229 chr2L 7126820 7126850 chr2L 7126949 7126979 7 129 12.5 0.0 6.2 1.0 159 chr2L 7126820 intron Pvf3 - chr2L 7126900 intron Pvf3 - chr2L 7126979 intron Pvf3 - chr2L_7_7125001 chr2L_7125001 RAL-850 230 chr2L 7149940 7150009 chr2L 7150090 7150159 23 150 6.0 0.0 3.0 5.8 219 chr2L 7149940 intron Pvf3 - chr2L 7150050 intron Pvf3 - chr2L 7150159 intron Pvf3 - chr2L_23_7150001 chr2L_7150001 RAL-850 231 chr2L 7169647 7169697 chr2L 7169804 7169853 11 156 0.0 0.0 0.0 11.0 206 chr2L 7169647 intergenic not near genes chr2L 7169750 intergenic not near genes chr2L 7169853 intergenic not near genes chr2L_11_7165001 chr2L_7165001 RAL-850 232 chr2L 7216815 7216836 chr2L 7216925 7216962 10 123 11.5 11.0 11.2 0.8 147 chr2L 7216815 intron CG13784 - chr2L 7216888 intron CG13784 - chr2L 7216962 intron CG13784 - chr2L_10_7215001 chr2L_7215001 RAL-850 233 chr2L 7217192 7217267 chr2L 7217347 7217419 35 153 5.0 7.5 6.2 4.9 227 chr2L 7217192 intron CG13784 - chr2L 7217306 intron CG13784 - chr2L 7217419 intron CG13784 - chr2L_35_7215001 chr2L_7215001 RAL-850 234 chr2L 7254477 7254545 chr2L 7254616 7254672 10 132 0.0 9.0 4.5 1.8 195 chr2L 7254477 intergenic not near genes chr2L 7254574 intergenic not near genes chr2L 7254672 intergenic not near genes chr2L_10_7250001 chr2L_7250001 RAL-850 235 chr2L 7325870 7325926 chr2L 7326005 7326046 12 127 6.0 2.5 4.2 2.3 176 chr2L 7325870 intergenic not near genes chr2L 7325958 intergenic not near genes chr2L 7326046 intergenic not near genes chr2L_12_7325001 chr2L_7325001 RAL-850 236 chr2L 7335162 7335232 chr2L 7335309 7335379 18 147 7.0 7.0 7.0 2.2 217 chr2L 7335162 intron Wnt6 + chr2L 7335270 intron Wnt6 + chr2L 7335379 intron Wnt6 + chr2L_18_7335001 chr2L_7335001 RAL-850 237 chr2L 7343296 7343347 chr2L 7350447 7350482 roo 22 7158 6.0 8.0 7.0 2.8 7186 chr2L 7343296 intron Wnt6 + chr2L 7346889 intron Wnt6 + chr2L 7350482 intron Wnt6 + chr2L_22_7345001 chr2L_7345001 RAL-850 238 chr2L 7370749 7370798 chr2L 7370904 7370953 8 155 9.0 6.0 7.5 0.9 204 chr2L 7370749 intron Wnt10 + chr2L 7370851 intron Wnt10 + chr2L 7370953 intron Wnt10 + chr2L_8_7370001 chr2L_7370001 RAL-850 239 chr2L 7375760 7375769 chr2L 7375923 7375932 8 163 22.5 8.0 15.2 0.5 172 chr2L 7375760 exon Wnt10 + chr2L 7375846 intron Wnt10 + chr2L 7375932 intron Wnt10 + chr2L_8_7375001 chr2L_7375001 RAL-850 240 chr2L 7375770 7375829 chr2L 7375919 7375992 21 160 12.0 7.5 9.8 1.9 222 chr2L 7375770 exon Wnt10 + chr2L 7375881 intron Wnt10 + chr2L 7375992 intron Wnt10 + chr2L_21_7375001 chr2L_7375001 RAL-850 241 chr2L 5904539 5904540 chr2L 7466148 7466149 9 1561609 8.5 31.0 19.8 0.4 1561610 chr2L 5904539 intron CG9021 - chr2L 6685344 exon CG11327 - chr2L 7466149 intergenic CG6055 + chr2L_9_6685001 chr2L_6685001 RAL-850 242 chr2L 5904541 5904541 chr2L 7466150 7466150 4 1561609 7.5 31.0 19.2 0.2 1561609 chr2L 5904541 intron CG9021 - chr2L 6685346 exon CG11327 - chr2L 7466150 intergenic CG6055 + chr2L_4_6685001 chr2L_6685001 RAL-850 243 chr2L 7502714 7502728 chr2L 7502830 7502854 7 120 18.0 12.5 15.2 0.4 140 chr2L 7502714 intron RapGAP1 - chr2L 7502784 intron RapGAP1 - chr2L 7502854 intron RapGAP1 - chr2L_7_7500001 chr2L_7500001 RAL-850 244 chr2L 7502733 7502761 chr2L 7502824 7502836 7 108 12.5 11.0 11.8 0.5 103 chr2L 7502733 intron RapGAP1 - chr2L 7502784 intron RapGAP1 - chr2L 7502836 intron RapGAP1 - chr2L_7_7500001 chr2L_7500001 RAL-850 245 chr2L 7555193 7555225 chr2L 7555320 7555352 11 127 0.0 15.0 7.5 1.3 159 chr2L 7555193 intron RapGAP1 - chr2L 7555272 intron RapGAP1 - chr2L 7555352 intron RapGAP1 - chr2L_11_7555001 chr2L_7555001 RAL-850 246 chr2L 7562140 7562191 chr2L 7562270 7562321 25 130 7.0 7.0 7.0 3.1 181 chr2L 7562140 intron RapGAP1 - chr2L 7562230 intron RapGAP1 - chr2L 7562321 intron RapGAP1 - chr2L_25_7560001 chr2L_7560001 RAL-850 247 chr2L 7567439 7567499 chr2L 7567566 7567626 30 126 12.5 9.5 11.0 2.5 187 chr2L 7567439 intron RapGAP1 - chr2L 7567532 intron RapGAP1 - chr2L 7567626 intron RapGAP1 - chr2L_30_7565001 chr2L_7565001 RAL-850 248 chr2L 7579162 7579231 chr2L 7579403 7579460 BS 15 235 4.5 0.5 2.5 4.3 298 chr2L 7579162 intergenic RapGAP1 - chr2L 7579311 intergenic RapGAP1 - chr2L 7579460 intergenic RapGAP1 - chr2L_15_7575001 chr2L_7575001 RAL-850 249 chr2L 7585458 7585496 chr2L 7585607 7585643 10 146 6.5 3.5 5.0 1.7 185 chr2L 7585458 intergenic not near genes chr2L 7585550 intergenic not near genes chr2L 7585643 intergenic not near genes chr2L_10_7585001 chr2L_7585001 RAL-850 250 chr2L 7621769 7621822 chr2L 7621911 7621963 15 141 2.5 7.0 4.8 2.6 194 chr2L 7621769 intergenic not near genes chr2L 7621866 intergenic not near genes chr2L 7621963 intergenic not near genes chr2L_15_7620001 chr2L_7620001 RAL-850 251 chr2L 7629106 7629185 chr2L 7629243 7629322 25 137 6.5 9.0 7.8 2.8 216 chr2L 7629106 intergenic not near genes chr2L 7629214 intergenic not near genes chr2L 7629322 intergenic not near genes chr2L_25_7625001 chr2L_7625001 RAL-850 252 chr2L 7640379 7640423 chr2L 7640515 7640559 16 135 8.0 3.0 5.5 2.5 180 chr2L 7640379 intergenic not near genes chr2L 7640469 intergenic not near genes chr2L 7640559 intergenic not near genes chr2L_16_7640001 chr2L_7640001 RAL-850 253 chr2L 7649982 7650045 chr2L 7650108 7650183 19 134 7.0 0.0 3.5 4.2 201 chr2L 7649982 intron Slob - chr2L 7650082 intron Slob - chr2L 7650183 intron Slob - chr2L_19_7650001 chr2L_7650001 RAL-850 254 chr2L 7676246 7676255 chr2L 7676578 7676587 5 332 14.0 0.0 7.0 0.6 341 chr2L 7676246 intron Myo28B1 + chr2L 7676416 intron Myo28B1 + chr2L 7676587 intron Myo28B1 + chr2L_5_7675001 chr2L_7675001 RAL-850 255 chr2L 7702488 7702564 chr2L 7702630 7702706 19 139 5.5 8.0 6.8 2.4 218 chr2L 7702488 intergenic Tep3 + chr2L 7702597 intergenic Tep3 + chr2L 7702706 intergenic Tep3 + chr2L_19_7700001 chr2L_7700001 RAL-850 256 chr2L 7704668 7704727 chr2L 7704856 7704915 27 187 3.0 9.5 6.2 3.8 247 chr2L 7704668 intron Tep3 + chr2L 7704792 intron Tep3 + chr2L 7704915 intron Tep3 + chr2L_27_7700001 chr2L_7700001 RAL-850 257 chr2L 7748643 7748709 chr2L 7748790 7748829 25 139 8.5 8.5 8.5 2.6 186 chr2L 7748643 intergenic not near genes chr2L 7748736 intergenic not near genes chr2L 7748829 intergenic not near genes chr2L_25_7745001 chr2L_7745001 RAL-850 258 chr2L 7766586 7766660 chr2L 7766712 7766786 13 123 9.5 5.5 7.5 1.5 200 chr2L 7766586 intergenic not near genes chr2L 7766686 intergenic not near genes chr2L 7766786 intergenic not near genes chr2L_13_7765001 chr2L_7765001 RAL-850 259 chr2L 7770041 7770103 chr2L 7770222 7770284 15 179 1.5 6.5 4.0 3.0 243 chr2L 7770041 intron CG7191 + chr2L 7770162 intron CG7191 + chr2L 7770284 intron CG7191 + chr2L_15_7770001 chr2L_7770001 RAL-850 260 chr2L 7770561 7770585 chr2L 7770731 7770756 4 171 3.0 1.0 2.0 1.3 195 chr2L 7770561 intron CG7191 + chr2L 7770658 intron CG7191 + chr2L 7770756 intron CG7191 + chr2L_4_7770001 chr2L_7770001 RAL-850 261 chr2L 7871919 7871968 chr2L 7872057 7872106 13 137 8.0 13.5 10.8 1.1 187 chr2L 7871919 intergenic CR45364 -,Proc - chr2L 7872012 3` UTR CR45364 - chr2L 7872106 3` UTR CR45364 - chr2L_13_7870001 chr2L_7870001 RAL-850 262 chr2L 7941153 7941195 chr2L 7941282 7941317 17 124 14.5 18.0 16.2 1.0 164 chr2L 7941153 intron Snoo - chr2L 7941235 intron Snoo - chr2L 7941317 intron Snoo - chr2L_17_7940001 chr2L_7940001 RAL-850 263 chr2L 7958994 7959058 chr2L 7960455 7960512 pogo 24 1460 5.0 7.5 6.2 3.3 1518 chr2L 7958994 intron Snoo - chr2L 7959753 intron Snoo - chr2L 7960512 intron Snoo - chr2L_24_7955001 chr2L_7955001 RAL-850 264 chr2L 7965503 7965506 chr2L 7965636 7965639 4 133 20.5 8.5 14.5 0.3 136 chr2L 7965503 intron Snoo - chr2L 7965571 intron Snoo - chr2L 7965639 intron Snoo - chr2L_4_7965001 chr2L_7965001 RAL-850 265 chr2L 7965511 7965572 chr2L 7965633 7965705 21 125 5.5 6.5 6.0 3.0 194 chr2L 7965511 intron Snoo - chr2L 7965608 intron Snoo - chr2L 7965705 intron Snoo - chr2L_21_7965001 chr2L_7965001 RAL-850 266 chr2L 7973022 7973090 chr2L 7973213 7973281 27 191 7.0 10.0 8.5 2.8 259 chr2L 7973022 intron Snoo - chr2L 7973152 intron Snoo - chr2L 7973281 intron Snoo - chr2L_27_7970001 chr2L_7970001 RAL-850 267 chr2L 7977043 7977112 chr2L 7984068 7984101 297 10 7017 5.0 6.5 5.8 1.5 7058 chr2L 7977043 intron Snoo - chr2L 7980572 intron Snoo - chr2L 7984101 intron,5` UTR Snoo -,CG7231 + chr2L_10_7980001 chr2L_7980001 RAL-850 268 chr2L 7986882 7986918 chr2L 7987018 7987055 8 135 3.0 11.5 7.2 1.0 173 chr2L 7986882 3` UTR pes - chr2L 7986968 3` UTR pes - chr2L 7987055 3` UTR pes - chr2L_8_7985001 chr2L_7985001 RAL-850 269 chr2L 8013570 8013581 chr2L 8018825 8018836 copia 7 5255 16.0 0.0 8.0 0.8 5266 chr2L 8013570 intron Tg + chr2L 8016203 intron Tg + chr2L 8018836 intron Tg + chr2L_7_8015001 chr2L_8015001 RAL-850 270 chr2L 8013595 8013643 chr2L 8023581 8023629 copia 18 9986 6.0 6.5 6.2 2.5 10034 chr2L 8013595 intron Tg + chr2L 8018612 intron Tg + chr2L 8023629 intron Tg + chr2L_18_8015001 chr2L_8015001 RAL-850 271 chr2L 8032981 8032987 chr2L 8033125 8033131 6 144 21.0 6.0 13.5 0.4 150 chr2L 8032981 intron,intron CG7367 -,Cka + chr2L 8033056 intron,intron CG7367 -,Cka + chr2L 8033131 intron,intron CG7367 -,Cka + chr2L_6_8030001 chr2L_8030001 RAL-850 272 chr2L 8032990 8033055 chr2L 8033123 8033198 33 137 8.0 5.5 6.8 4.2 208 chr2L 8032990 intron,intron CG7367 -,Cka + chr2L 8033094 intron,intron CG7367 -,Cka + chr2L 8033198 intron,intron CG7367 -,Cka + chr2L_33_8030001 chr2L_8030001 RAL-850 273 chr2L 8085254 8085323 chr2L 8085494 8085563 24 240 10.0 7.5 8.8 2.4 309 chr2L 8085254 intron Bsg + chr2L 8085408 intron Bsg + chr2L 8085563 intron Bsg + chr2L_24_8085001 chr2L_8085001 RAL-850 274 chr2L 8167662 8167737 chr2L 8167791 8167866 40 126 8.5 8.0 8.2 4.3 204 chr2L 8167662 intron Piezo + chr2L 8167764 intron Piezo + chr2L 8167866 intron Piezo + chr2L_40_8165001 chr2L_8165001 RAL-850 275 chr2L 8231917 8231960 chr2L 8232075 8232118 13 158 7.5 3.5 5.5 2.0 201 chr2L 8231917 intron Pvr - chr2L 8232018 intron Pvr - chr2L 8232118 intron Pvr - chr2L_13_8230001 chr2L_8230001 RAL-850 276 chr2L 8244682 8244748 chr2L 8244854 8244920 29 170 4.0 4.5 4.2 5.6 238 chr2L 8244682 intron CG8086 - chr2L 8244801 intron CG8086 - chr2L 8244920 intron CG8086 - chr2L_29_8240001 chr2L_8240001 RAL-850 277 chr2L 8271581 8271648 chr2L 8271695 8271774 11 125 3.0 7.0 5.0 1.8 193 chr2L 8271581 intron Btk29A - chr2L 8271678 intron Btk29A - chr2L 8271774 intron Btk29A - chr2L_11_8270001 chr2L_8270001 RAL-850 278 chr2L 8284971 8285036 chr2L 8285097 8285162 28 126 8.0 4.5 6.2 3.9 191 chr2L 8284971 intron Btk29A - chr2L 8285066 intron Btk29A - chr2L 8285162 intron Btk29A - chr2L_28_8285001 chr2L_8285001 RAL-850 279 chr2L 8285374 8285450 chr2L 8285515 8285591 20 138 5.0 9.5 7.2 2.4 217 chr2L 8285374 intron Btk29A - chr2L 8285482 intron Btk29A - chr2L 8285591 intron Btk29A - chr2L_20_8285001 chr2L_8285001 RAL-850 280 chr2L 8286265 8286326 chr2L 8286386 8286463 30 136 9.0 10.0 9.5 2.9 198 chr2L 8286265 intron Btk29A - chr2L 8286364 intron Btk29A - chr2L 8286463 intron Btk29A - chr2L_30_8285001 chr2L_8285001 RAL-850 281 chr2L 8336902 8336936 chr2L 8337031 8337065 4 129 6.0 8.0 7.0 0.5 163 chr2L 8336902 intergenic not near genes chr2L 8336984 intergenic not near genes chr2L 8337065 intergenic not near genes chr2L_4_8335001 chr2L_8335001 RAL-850 282 chr2L 8345052 8345127 chr2L 8345184 8345259 27 128 5.0 7.5 6.2 3.8 207 chr2L 8345052 intergenic CR45371 - chr2L 8345156 intergenic CR45371 - chr2L 8345259 intergenic CR45371 - chr2L_27_8345001 chr2L_8345001 RAL-850 283 chr2L 8452381 8452441 chr2L 8461602 8461644 roo 24 9220 19.0 16.0 17.5 1.3 9263 chr2L 8452381 intron fu12 - chr2L 8457012 intron fu12 - chr2L 8461644 intron fu12 - chr2L_24_8455001 chr2L_8455001 RAL-850 284 chr2L 8498159 8498229 chr2L 8498290 8498356 28 130 8.5 6.0 7.2 3.4 197 chr2L 8498159 intron Dh31 - chr2L 8498258 intron Dh31 - chr2L 8498356 intron Dh31 - chr2L_28_8495001 chr2L_8495001 RAL-850 285 chr2L 8505109 8505180 chr2L 8505259 8505330 27 149 5.5 7.0 6.2 3.8 221 chr2L 8505109 intron Dh31 - chr2L 8505220 intron Dh31 - chr2L 8505330 intron Dh31 - chr2L_27_8505001 chr2L_8505001 RAL-850 286 chr2L 8508974 8509003 chr2L 8509126 8509154 11 152 0.0 10.5 5.2 1.8 180 chr2L 8508974 intergenic CG13096 - chr2L 8509064 intergenic CG13096 - chr2L 8509154 3` UTR CG13096 - chr2L_11_8505001 chr2L_8505001 RAL-850 287 chr2L 8578452 8578452 chr2L 16071771 16071771 4 7493319 35.5 31.0 33.2 0.1 7493319 chr2L 8578452 intron Sema-1a + chr2L 12325112 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_4_12325001 chr2L_12325001 RAL-850 288 chr2L 8594426 8594487 chr2L 8601530 8601591 297 13 7104 8.0 7.5 7.8 1.5 7165 chr2L 8594426 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598008 intron Sema-1a + chr2L 8601591 intron Sema-1a + chr2L_13_8595001 chr2L_8595001 RAL-850 289 chr2L 8687040 8687070 chr2L 8687194 8687224 14 153 11.5 7.5 9.5 1.3 184 chr2L 8687040 3` UTR Trs23 + chr2L 8687132 intergenic Trs23 +,Hnf4 - chr2L 8687224 intergenic Hnf4 -,Trs23 + chr2L_14_8685001 chr2L_8685001 RAL-850 290 chr2L 8723076 8723138 chr2L 8731496 8731565 Tirant 33 8424 9.5 10.0 9.8 3.1 8489 chr2L 8723076 intron raw - chr2L 8727320 intron raw - chr2L 8731565 intron raw - chr2L_33_8725001 chr2L_8725001 RAL-850 291 chr2L 8788730 8788774 chr2L 8788869 8788915 7 139 5.5 9.5 7.5 0.8 185 chr2L 8788730 intergenic not near genes chr2L 8788822 intergenic not near genes chr2L 8788915 intergenic not near genes chr2L_7_8785001 chr2L_8785001 RAL-850 292 chr2L 8799767 8799819 chr2L 8799933 8799985 29 164 5.0 12.5 8.8 3.0 218 chr2L 8799767 intergenic not near genes chr2L 8799876 intergenic not near genes chr2L 8799985 intergenic not near genes chr2L_29_8795001 chr2L_8795001 RAL-850 293 chr2L 8799821 8799831 chr2L 8799919 8799997 5 145 2.5 10.0 6.2 0.7 176 chr2L 8799821 intergenic not near genes chr2L 8799909 intergenic not near genes chr2L 8799997 intergenic not near genes chr2L_5_8795001 chr2L_8795001 RAL-850 294 chr2L 8813823 8813860 chr2L 8813945 8813979 11 118 6.0 19.0 12.5 0.8 156 chr2L 8813823 intergenic not near genes chr2L 8813901 intergenic not near genes chr2L 8813979 intergenic not near genes chr2L_11_8810001 chr2L_8810001 RAL-850 295 chr2L 8815842 8815891 chr2L 8815946 8816031 7 131 6.0 0.5 3.2 1.7 189 chr2L 8815842 intergenic not near genes chr2L 8815936 intergenic not near genes chr2L 8816031 intergenic not near genes chr2L_7_8815001 chr2L_8815001 RAL-850 296 chr2L 8820879 8820949 chr2L 8821008 8821079 16 129 11.5 6.5 9.0 1.6 200 chr2L 8820879 intergenic not near genes chr2L 8820979 intergenic not near genes chr2L 8821079 intergenic not near genes chr2L_16_8820001 chr2L_8820001 RAL-850 297 chr2L 8857935 8857951 chr2L 8858063 8858078 4 128 21.0 6.5 13.8 0.3 143 chr2L 8857935 intergenic not near genes chr2L 8858006 intergenic not near genes chr2L 8858078 intergenic not near genes chr2L_4_8855001 chr2L_8855001 RAL-850 298 chr2L 8857959 8858007 chr2L 8858059 8858093 21 113 7.5 5.5 6.5 2.8 134 chr2L 8857959 intergenic not near genes chr2L 8858026 intergenic not near genes chr2L 8858093 intergenic not near genes chr2L_21_8855001 chr2L_8855001 RAL-850 299 chr2L 8956187 8956241 chr2L 8956314 8956373 5 129 4.0 4.0 4.0 1.0 186 chr2L 8956187 intron CG31886 - chr2L 8956280 intron CG31886 - chr2L 8956373 intron CG31886 - chr2L_5_8955001 chr2L_8955001 RAL-850 300 chr2L 8976220 8976254 chr2L 8976328 8976374 6 126 0.0 5.5 2.8 1.6 154 chr2L 8976220 intergenic not near genes chr2L 8976297 intergenic not near genes chr2L 8976374 intergenic not near genes chr2L_6_8975001 chr2L_8975001 RAL-850 301 chr2L 8980423 8980478 chr2L 8980562 8980617 7 139 9.5 0.0 4.8 1.2 194 chr2L 8980423 intron CG13101 - chr2L 8980520 intron CG13101 - chr2L 8980617 intron CG13101 - chr2L_7_8980001 chr2L_8980001 RAL-850 302 chr2L 9000238 9000309 chr2L 9007798 9007801 roo 35 7556 10.0 12.0 11.0 2.9 7563 chr2L 9000238 intergenic Try29F + chr2L 9004020 intergenic not near genes chr2L 9007801 intergenic not near genes chr2L_35_9000001 chr2L_9000001 RAL-850 303 chr2L 9053364 9053411 chr2L 9053649 9053696 23 284 13.5 8.5 11.0 1.9 332 chr2L 9053364 exon CG31708 - chr2L 9053530 intron CG31708 - chr2L 9053696 intron CG31708 - chr2L_23_9050001 chr2L_9050001 RAL-850 304 chr2L 9069631 9069649 chr2L 9069772 9069790 6 141 0.0 0.5 0.2 5.0 159 chr2L 9069631 intron CG31708 - chr2L 9069710 intron CG31708 - chr2L 9069790 intron CG31708 - chr2L_6_9065001 chr2L_9065001 RAL-850 305 chr2L 9084336 9084340 chr2L 16217660 16217660 13 7133321 30.0 33.5 31.8 0.4 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_13_12650001 chr2L_12650001 RAL-850 306 chr2L 9095521 9095601 chr2L 9095658 9095721 31 134 8.0 5.0 6.5 4.1 200 chr2L 9095521 intergenic not near genes chr2L 9095621 intergenic not near genes chr2L 9095721 intergenic not near genes chr2L_31_9095001 chr2L_9095001 RAL-850 307 chr2L 9158718 9158766 chr2L 9158941 9158987 7 221 11.0 2.5 6.8 0.9 269 chr2L 9158718 intron CG32982 + chr2L 9158852 intron CG32982 + chr2L 9158987 intron CG32982 + chr2L_7_9155001 chr2L_9155001 RAL-850 308 chr2L 9173027 9173047 chr2L 9173154 9173174 6 127 9.0 5.0 7.0 0.8 147 chr2L 9173027 intron tai + chr2L 9173100 intron tai + chr2L 9173174 intron tai + chr2L_6_9170001 chr2L_9170001 RAL-850 309 chr2L 9217928 9217992 chr2L 9222765 9222829 Doc 31 4836 7.5 9.5 8.5 3.3 4901 chr2L 9217928 intron tai + chr2L 9220378 intron tai + chr2L 9222829 intron tai + chr2L_31_9220001 chr2L_9220001 RAL-850 310 chr2L 9227179 9227248 chr2L 9227311 9227381 6 133 3.5 6.0 4.8 1.0 202 chr2L 9227179 intron tai + chr2L 9227280 intron tai + chr2L 9227381 intron tai + chr2L_6_9225001 chr2L_9225001 RAL-850 311 chr2L 9251099 9251169 chr2L 9251246 9251316 28 146 4.0 3.5 3.8 5.8 217 chr2L 9251099 intergenic aust -,borr - chr2L 9251208 intergenic aust -,borr - chr2L 9251316 intergenic borr -,aust - chr2L_28_9250001 chr2L_9250001 RAL-850 312 chr2L 9264308 9264378 chr2L 9264458 9264528 23 149 9.0 7.0 8.0 2.6 220 chr2L 9264308 intron Ggamma30A + chr2L 9264418 intron Ggamma30A + chr2L 9264528 intron Ggamma30A + chr2L_23_9260001 chr2L_9260001 RAL-850 313 chr2L 9279937 9280012 chr2L 9280081 9280156 14 143 6.0 5.0 5.5 2.2 219 chr2L 9279937 intron Ggamma30A + chr2L 9280046 intron Ggamma30A + chr2L 9280156 intron Ggamma30A + chr2L_14_9280001 chr2L_9280001 RAL-850 314 chr2L 9283159 9283170 chr2L 9283286 9283297 5 127 15.5 10.5 13.0 0.4 138 chr2L 9283159 intron Ggamma30A + chr2L 9283228 intron Ggamma30A + chr2L 9283297 intron Ggamma30A + chr2L_5_9280001 chr2L_9280001 RAL-850 315 chr2L 9283172 9283180 chr2L 9283284 9283307 7 125 14.5 10.5 12.5 0.5 135 chr2L 9283172 intron Ggamma30A + chr2L 9283240 intron Ggamma30A + chr2L 9283307 intron Ggamma30A + chr2L_7_9280001 chr2L_9280001 RAL-850 316 chr2L 9287280 9287350 chr2L 9287427 9287497 35 147 7.5 9.5 8.5 3.7 217 chr2L 9287280 intron Ggamma30A + chr2L 9287388 intron Ggamma30A + chr2L 9287497 intron Ggamma30A + chr2L_35_9285001 chr2L_9285001 RAL-850 317 chr2L 9290735 9290759 chr2L 9290848 9290886 10 124 12.5 0.0 6.2 1.4 151 chr2L 9290735 intron Ggamma30A + chr2L 9290810 intron Ggamma30A + chr2L 9290886 intron Ggamma30A + chr2L_10_9290001 chr2L_9290001 RAL-850 318 chr2L 9297328 9297401 chr2L 9297455 9297528 38 127 10.0 10.5 10.2 3.4 200 chr2L 9297328 3` UTR Ggamma30A + chr2L 9297428 3` UTR Ggamma30A + chr2L 9297528 3` UTR Ggamma30A + chr2L_38_9295001 chr2L_9295001 RAL-850 319 chr2L 9367551 9367585 chr2L 9367677 9367711 13 126 8.0 9.5 8.8 1.3 160 chr2L 9367551 intergenic CG34181 + chr2L 9367631 intergenic CG34181 + chr2L 9367711 exon CG34181 + chr2L_13_9365001 chr2L_9365001 RAL-850 320 chr2L 9380195 9380252 chr2L 9380340 9380397 17 144 9.5 7.5 8.5 1.8 202 chr2L 9380195 exon Shawl - chr2L 9380296 intron Shawl - chr2L 9380397 intron Shawl - chr2L_17_9380001 chr2L_9380001 RAL-850 321 chr2L 9387214 9387276 chr2L 9387362 9387424 18 148 4.0 1.5 2.8 4.7 210 chr2L 9387214 intron Shawl - chr2L 9387319 intron Shawl - chr2L 9387424 intron,5` UTR Shawl -,Aldh + chr2L_18_9385001 chr2L_9385001 RAL-850 322 chr2L 9391535 9391610 chr2L 9391695 9391770 36 160 9.0 12.5 10.8 3.1 235 chr2L 9391535 intron,3` UTR Shawl -,Aldh + chr2L 9391652 intron Shawl - chr2L 9391770 intron Shawl - chr2L_36_9390001 chr2L_9390001 RAL-850 323 chr2L 9393450 9393517 chr2L 9396467 9396523 jockey 27 3015 6.0 10.5 8.2 2.9 3073 chr2L 9393450 intron Shawl - chr2L 9394986 intron Shawl - chr2L 9396523 intron Shawl - chr2L_27_9390001 chr2L_9390001 RAL-850 324 chr2L 9464832 9464961 chr2L 9464960 9465095 12 144 0.0 0.0 0.0 12.0 263 chr2L 9464832 intergenic not near genes chr2L 9464964 intergenic not near genes chr2L 9465095 intergenic not near genes chr2L_12_9460001 chr2L_9460001 RAL-850 325 chr2L 9506388 9506455 chr2L 9506588 9506647 34 198 5.5 11.0 8.2 3.7 259 chr2L 9506388 intron CG33298 + chr2L 9506518 intron CG33298 + chr2L 9506647 intron CG33298 + chr2L_34_9505001 chr2L_9505001 RAL-850 326 chr2L 9593323 9593385 chr2L 9593453 9593517 29 130 9.0 12.5 10.8 2.5 194 chr2L 9593323 intergenic not near genes chr2L 9593420 intergenic not near genes chr2L 9593517 intergenic not near genes chr2L_29_9590001 chr2L_9590001 RAL-850 327 chr2L 9612803 9612817 chr2L 9612932 9612946 4 129 0.0 0.0 0.0 4.0 143 chr2L 9612803 intergenic gcm2 +,Trx-2 + chr2L 9612874 intergenic gcm2 +,Trx-2 + chr2L 9612946 intergenic Trx-2 +,gcm2 + chr2L_4_9610001 chr2L_9610001 RAL-850 328 chr2L 9719733 9719777 chr2L 9719866 9719898 15 128 0.0 1.0 0.5 10.0 165 chr2L 9719733 intron Nckx30C - chr2L 9719816 intron Nckx30C - chr2L 9719898 intron Nckx30C - chr2L_15_9715001 chr2L_9715001 RAL-850 329 chr2L 9744818 9744832 chr2L 9744955 9744969 6 137 6.5 7.0 6.8 0.8 151 chr2L 9744818 intron Nckx30C - chr2L 9744894 intron Nckx30C - chr2L 9744969 intron Nckx30C - chr2L_6_9740001 chr2L_9740001 RAL-850 330 chr2L 9809652 9809697 chr2L 9809968 9810019 16 329 7.5 4.0 5.8 2.4 367 chr2L 9809652 intron nAChRalpha6 - chr2L 9809836 intron nAChRalpha6 - chr2L 9810019 intron nAChRalpha6 - chr2L_16_9805001 chr2L_9805001 RAL-850 331 chr2L 9837385 9837441 chr2L 9837513 9837569 17 128 6.5 0.0 3.2 4.0 184 chr2L 9837385 intron nAChRalpha6 - chr2L 9837477 intron nAChRalpha6 - chr2L 9837569 intron nAChRalpha6 - chr2L_17_9835001 chr2L_9835001 RAL-850 332 chr2L 9843220 9843232 chr2L 9843346 9843363 6 129 0.0 18.0 9.0 0.6 143 chr2L 9843220 intron nAChRalpha6 - chr2L 9843292 intron nAChRalpha6 - chr2L 9843363 intron nAChRalpha6 - chr2L_6_9840001 chr2L_9840001 RAL-850 333 chr2L 9862343 9862358 chr2L 9862501 9862516 4 158 0.0 17.5 8.8 0.4 173 chr2L 9862343 intron nAChRalpha6 - chr2L 9862430 intron nAChRalpha6 - chr2L 9862516 intron nAChRalpha6 - chr2L_4_9860001 chr2L_9860001 RAL-850 334 chr2L 9871476 9871534 chr2L 9871610 9871668 10 134 3.5 5.5 4.5 1.8 192 chr2L 9871476 intron nAChRalpha6 - chr2L 9871572 intron nAChRalpha6 - chr2L 9871668 intron nAChRalpha6 - chr2L_10_9870001 chr2L_9870001 RAL-850 335 chr2L 9943299 9943378 chr2L 9943430 9943508 29 129 6.0 0.5 3.2 6.9 209 chr2L 9943299 intron CG5853 - chr2L 9943404 intron CG5853 - chr2L 9943508 intron CG5853 - chr2L_29_9940001 chr2L_9940001 RAL-850 336 chr2L 9973692 9973759 chr2L 9980861 9980880 HMS-Beagle 34 7166 10.0 16.0 13.0 2.4 7188 chr2L 9973692 intergenic not near genes chr2L 9977286 intergenic not near genes chr2L 9980880 intergenic not near genes chr2L_34_9975001 chr2L_9975001 RAL-850 337 chr2L 9991140 9991201 chr2L 9991294 9991320 26 148 11.5 1.5 6.5 3.5 180 chr2L 9991140 intron bib + chr2L 9991230 intron bib + chr2L 9991320 intron bib + chr2L_26_9990001 chr2L_9990001 RAL-850 338 chr2L 10040807 10040873 chr2L 10041030 10041050 36 225 6.0 8.5 7.2 4.4 243 chr2L 10040807 intergenic not near genes chr2L 10040928 intergenic not near genes chr2L 10041050 intergenic not near genes chr2L_36_10040001 chr2L_10040001 RAL-850 339 chr2L 10051693 10051752 chr2L 10051809 10051868 38 124 10.0 6.5 8.2 4.1 175 chr2L 10051693 5` UTR CR44874 + chr2L 10051780 5` UTR CR44874 + chr2L 10051868 5` UTR CR44874 + chr2L_38_10050001 chr2L_10050001 RAL-850 340 chr2L 10061365 10061426 chr2L 10061538 10061599 13 169 6.0 7.5 6.8 1.7 234 chr2L 10061365 intron Spn31A + chr2L 10061482 intron Spn31A + chr2L 10061599 intron Spn31A + chr2L_13_10060001 chr2L_10060001 RAL-850 341 chr2L 10119213 10119261 chr2L 10119567 10119620 23 357 10.0 13.0 11.5 1.8 407 chr2L 10119213 intron,intron CG44153 -,CG34109 + chr2L 10119416 intron,intron CG44153 -,CG34109 + chr2L 10119620 intron,intron CG44153 -,CG34109 + chr2L_23_10115001 chr2L_10115001 RAL-850 342 chr2L 10130100 10130175 chr2L 10130231 10130306 10 130 5.5 7.5 6.5 1.3 206 chr2L 10130100 intron CG44153 - chr2L 10130203 intron CG44153 - chr2L 10130306 intron CG44153 - chr2L_10_10130001 chr2L_10130001 RAL-850 343 chr2L 10136191 10136271 chr2L 10136323 10136403 25 128 4.5 2.0 3.2 6.0 212 chr2L 10136191 intron CG44153 - chr2L 10136297 intron CG44153 - chr2L 10136403 intron CG44153 - chr2L_25_10135001 chr2L_10135001 RAL-850 344 chr2L 10138141 10138186 chr2L 10143435 10143480 Rt1c 16 5291 10.5 15.5 13.0 1.1 5339 chr2L 10138141 intron CG44153 - chr2L 10140810 intron CG44153 - chr2L 10143480 intron CG44153 - chr2L_16_10140001 chr2L_10140001 RAL-850 345 chr2L 10152056 10152130 chr2L 10152463 10152539 32 409 2.5 9.0 5.8 4.7 483 chr2L 10152056 intron,intron CG44153 -,CG4839 + chr2L 10152298 intron,intron CG44153 -,CG4839 + chr2L 10152539 intron,intron CG44153 -,CG4839 + chr2L_32_10150001 chr2L_10150001 RAL-850 346 chr2L 10156278 10156346 chr2L 10163798 10163866 blood 26 7517 7.5 7.5 7.5 3.1 7588 chr2L 10156278 intron,3` UTR CG44153 -,CG4839 + chr2L 10160072 intron CG44153 - chr2L 10163866 intron CG44153 - chr2L_26_10160001 chr2L_10160001 RAL-850 347 chr2L 10167574 10167651 chr2L 10167853 10167929 19 274 5.5 4.0 4.8 3.3 355 chr2L 10167574 intron CG44153 - chr2L 10167752 intron CG44153 - chr2L 10167929 intron CG44153 - chr2L_19_10165001 chr2L_10165001 RAL-850 348 chr2L 10177363 10177395 chr2L 10177488 10177517 9 128 6.0 4.0 5.0 1.5 154 chr2L 10177363 intron CG44153 - chr2L 10177440 intron CG44153 - chr2L 10177517 intron CG44153 - chr2L_9_10175001 chr2L_10175001 RAL-850 349 chr2L 10191919 10191946 chr2L 10192046 10192073 14 127 10.5 19.5 15.0 0.9 154 chr2L 10191919 intron Sur - chr2L 10191996 intron Sur - chr2L 10192073 intron Sur - chr2L_14_10190001 chr2L_10190001 RAL-850 350 chr2L 10209799 10209818 chr2L 10209926 10209945 12 127 14.5 3.0 8.8 1.2 146 chr2L 10209799 intergenic CR44845 +,CG5727 -,CG5731 - chr2L 10209872 3` UTR CG5727 - chr2L 10209945 3` UTR CG5727 - chr2L_12_10205001 chr2L_10205001 RAL-850 351 chr2L 10281641 10281684 chr2L 10281786 10281840 12 146 0.0 13.5 6.8 1.5 199 chr2L 10281641 intergenic CG5604 - chr2L 10281740 intergenic CG5604 - chr2L 10281840 intergenic CG5604 - chr2L_12_10280001 chr2L_10280001 RAL-850 352 chr2L 10294628 10294680 chr2L 10294764 10294816 12 136 10.5 8.0 9.2 1.2 188 chr2L 10294628 exon Hand - chr2L 10294722 intron Hand - chr2L 10294816 intron Hand - chr2L_12_10290001 chr2L_10290001 RAL-850 353 chr2L 10447024 10447096 chr2L 10447184 10447255 13 159 4.0 4.0 4.0 2.6 231 chr2L 10447024 intron loh + chr2L 10447140 intron loh + chr2L 10447255 intron loh + chr2L_13_10445001 chr2L_10445001 RAL-850 354 chr2L 10490233 10490246 chr2L 10490365 10490378 4 132 27.5 14.0 20.8 0.2 145 chr2L 10490233 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490306 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490378 3` UTR,3` UTR CG6144 +,CG13144 - chr2L_4_10490001 chr2L_10490001 RAL-850 355 chr2L 10490254 10490303 chr2L 10490361 10490435 12 128 11.0 14.0 12.5 0.9 181 chr2L 10490254 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490344 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490435 3` UTR,3` UTR CG6144 +,CG13144 - chr2L_12_10490001 chr2L_10490001 RAL-850 356 chr2L 10495267 10495304 chr2L 10495392 10495431 21 127 17.0 19.5 18.2 1.1 164 chr2L 10495267 intron Myo31DF - chr2L 10495349 intron Myo31DF - chr2L 10495431 intron Myo31DF - chr2L_21_10495001 chr2L_10495001 RAL-850 357 chr2L 10554283 10554342 chr2L 10554416 10554475 19 133 7.5 4.5 6.0 2.7 192 chr2L 10554283 intron Trim9 + chr2L 10554379 intron Trim9 + chr2L 10554475 intron Trim9 + chr2L_19_10550001 chr2L_10550001 RAL-850 358 chr2L 10571908 10571926 chr2L 10572087 10572105 9 177 18.5 11.0 14.8 0.6 197 chr2L 10571908 intron Trim9 + chr2L 10572006 intron Trim9 + chr2L 10572105 intron Trim9 + chr2L_9_10570001 chr2L_10570001 RAL-850 359 chr2L 10571927 10571939 chr2L 10572086 10572118 6 174 15.5 11.0 13.2 0.4 191 chr2L 10571927 intron Trim9 + chr2L 10572022 intron Trim9 + chr2L 10572118 intron Trim9 + chr2L_6_10570001 chr2L_10570001 RAL-850 360 chr2L 10571946 10571980 chr2L 10572082 10572134 11 167 10.0 9.5 9.8 1.0 188 chr2L 10571946 intron Trim9 + chr2L 10572040 intron Trim9 + chr2L 10572134 intron Trim9 + chr2L_11_10570001 chr2L_10570001 RAL-850 361 chr2L 10572668 10572677 chr2L 10572799 10572808 8 131 16.5 14.5 15.5 0.5 140 chr2L 10572668 intron Trim9 + chr2L 10572738 intron Trim9 + chr2L 10572808 intron Trim9 + chr2L_8_10570001 chr2L_10570001 RAL-850 362 chr2L 10572680 10572726 chr2L 10572791 10572857 29 130 10.5 11.0 10.8 2.5 177 chr2L 10572680 intron Trim9 + chr2L 10572768 intron Trim9 + chr2L 10572857 intron Trim9 + chr2L_29_10570001 chr2L_10570001 RAL-850 363 chr2L 10580756 10580767 chr2L 10580887 10580898 5 131 17.5 7.0 12.2 0.4 142 chr2L 10580756 intron Trim9 + chr2L 10580827 intron Trim9 + chr2L 10580898 intron Trim9 + chr2L_5_10580001 chr2L_10580001 RAL-850 364 chr2L 10580771 10580818 chr2L 10580901 10580949 19 129 6.0 9.5 7.8 2.2 178 chr2L 10580771 intron Trim9 + chr2L 10580860 intron Trim9 + chr2L 10580949 intron Trim9 + chr2L_19_10580001 chr2L_10580001 RAL-850 365 chr2L 10592808 10592831 chr2L 10600520 10600543 opus 5 7712 8.5 9.0 8.8 0.5 7735 chr2L 10592808 intron Trim9 + chr2L 10596676 intron Trim9 + chr2L 10600543 intron Trim9 + chr2L_5_10595001 chr2L_10595001 RAL-850 366 chr2L 10592833 10592869 chr2L 10600505 10600581 opus 18 7710 6.0 7.0 6.5 2.4 7748 chr2L 10592833 intron Trim9 + chr2L 10596707 intron Trim9 + chr2L 10600581 intron Trim9 + chr2L_18_10595001 chr2L_10595001 RAL-850 367 chr2L 10604167 10604217 chr2L 10604299 10604349 17 131 6.5 5.0 5.8 2.5 182 chr2L 10604167 intron Trim9 + chr2L 10604258 intron Trim9 + chr2L 10604349 intron Trim9 + chr2L_17_10600001 chr2L_10600001 RAL-850 368 chr2L 10606588 10606657 chr2L 10606757 10606828 26 170 10.0 5.5 7.8 3.0 240 chr2L 10606588 intron Trim9 + chr2L 10606708 intron Trim9 + chr2L 10606828 intron Trim9 + chr2L_26_10605001 chr2L_10605001 RAL-850 369 chr2L 10634715 10634784 chr2L 10634845 10634914 26 130 9.5 7.0 8.2 2.8 199 chr2L 10634715 intron CG7329 - chr2L 10634814 intron CG7329 - chr2L 10634914 intron CG7329 - chr2L_26_10630001 chr2L_10630001 RAL-850 370 chr2L 10656544 10656607 chr2L 10656670 10656733 29 126 9.0 13.0 11.0 2.4 189 chr2L 10656544 intergenic not near genes chr2L 10656638 intergenic not near genes chr2L 10656733 intergenic not near genes chr2L_29_10655001 chr2L_10655001 RAL-850 371 chr2L 10673690 10673763 chr2L 10673822 10673895 31 132 6.0 6.0 6.0 4.4 205 chr2L 10673690 intergenic not near genes chr2L 10673792 intergenic not near genes chr2L 10673895 intergenic not near genes chr2L_31_10670001 chr2L_10670001 RAL-850 372 chr2L 10678992 10679037 chr2L 10679125 10679170 15 134 13.0 6.5 9.8 1.4 178 chr2L 10678992 exon CG17104 + chr2L 10679081 exon CG17104 + chr2L 10679170 exon CG17104 + chr2L_15_10675001 chr2L_10675001 RAL-850 373 chr2L 10688496 10688562 chr2L 10688622 10688688 10 126 2.5 4.5 3.5 2.2 192 chr2L 10688496 intergenic CG7294 - chr2L 10688592 intergenic CG7294 - chr2L 10688688 intergenic CG7294 - chr2L_10_10685001 chr2L_10685001 RAL-850 374 chr2L 10715030 10715085 chr2L 10715156 10715180 10 107 10.0 0.0 5.0 1.7 150 chr2L 10715030 intergenic not near genes chr2L 10715105 intergenic not near genes chr2L 10715180 intergenic not near genes chr2L_10_10715001 chr2L_10715001 RAL-850 375 chr2L 10752370 10752446 chr2L 10752536 10752613 23 166 9.5 10.0 9.8 2.1 243 chr2L 10752370 intron CG17124 - chr2L 10752492 intron CG17124 - chr2L 10752613 intron CG17124 - chr2L_23_10750001 chr2L_10750001 RAL-850 376 chr2L 10777177 10777183 chr2L 10777339 10777345 4 162 30.0 6.0 18.0 0.2 168 chr2L 10777177 intron CG31869 - chr2L 10777261 intron CG31869 - chr2L 10777345 intron CG31869 - chr2L_4_10775001 chr2L_10775001 RAL-850 377 chr2L 10777184 10777210 chr2L 10777336 10777368 4 153 20.5 5.0 12.8 0.3 184 chr2L 10777184 intron CG31869 - chr2L 10777276 intron CG31869 - chr2L 10777368 intron CG31869 - chr2L_4_10775001 chr2L_10775001 RAL-850 378 chr2L 10787932 10788025 chr2L 10788075 10788151 11 138 0.0 0.0 0.0 11.0 219 chr2L 10787932 intron CG31869 - chr2L 10788042 intron CG31869 - chr2L 10788151 intron CG31869 - chr2L_11_10785001 chr2L_10785001 RAL-850 379 chr2L 10817240 10817275 chr2L 10817366 10817406 25 123 14.5 12.5 13.5 1.7 166 chr2L 10817240 intron Nos - chr2L 10817323 intron Nos - chr2L 10817406 intron Nos - chr2L_25_10815001 chr2L_10815001 RAL-850 380 chr2L 10850092 10850173 chr2L 10850243 10850318 31 147 8.5 1.5 5.0 5.2 226 chr2L 10850092 5` UTR porin - chr2L 10850205 5` UTR,5` UTR porin -,CG43129 + chr2L 10850318 5` UTR,intron porin -,CG43129 + chr2L_31_10850001 chr2L_10850001 RAL-850 381 chr2L 10852087 10852165 chr2L 10852264 10852329 18 171 0.0 6.0 3.0 4.5 242 chr2L 10852087 intron CG43129 + chr2L 10852208 intron CG43129 + chr2L 10852329 intron CG43129 + chr2L_18_10850001 chr2L_10850001 RAL-850 382 chr2L 10862807 10862858 chr2L 10864464 10864521 Rt1c 16 1653 16.5 12.5 14.5 1.0 1714 chr2L 10862807 3` UTR CR43807 - chr2L 10863664 intron CR43807 - chr2L 10864521 3` UTR CR43807 - chr2L_16_10860001 chr2L_10860001 RAL-850 383 chr2L 10862859 10862867 chr2L 10864452 10864531 Rt1c 7 1644 15.0 10.0 12.5 0.5 1672 chr2L 10862859 3` UTR CR43807 - chr2L 10863695 intron CR43807 - chr2L 10864531 3` UTR CR43807 - chr2L_7_10860001 chr2L_10860001 RAL-850 384 chr2L 10876534 10876568 chr2L 10883640 10883674 297 5 7106 7.5 13.0 10.2 0.4 7140 chr2L 10876534 intergenic not near genes chr2L 10880104 intergenic not near genes chr2L 10883674 intergenic not near genes chr2L_5_10880001 chr2L_10880001 RAL-850 385 chr2L 10891440 10891519 chr2L 10891604 10891683 16 164 4.0 5.5 4.8 2.8 243 chr2L 10891440 intergenic not near genes chr2L 10891562 intergenic not near genes chr2L 10891683 intergenic not near genes chr2L_16_10890001 chr2L_10890001 RAL-850 386 chr2L 10912942 10912994 chr2L 10913073 10913123 20 127 12.0 11.0 11.5 1.6 181 chr2L 10912942 intergenic not near genes chr2L 10913032 intergenic not near genes chr2L 10913123 intergenic not near genes chr2L_20_10910001 chr2L_10910001 RAL-850 387 chr2L 10946920 10946972 chr2L 10956175 10956180 roo 21 9259 13.5 13.0 13.2 1.5 9260 chr2L 10946920 intron dpr2 - chr2L 10951550 intron dpr2 - chr2L 10956180 intron dpr2 - chr2L_21_10950001 chr2L_10950001 RAL-850 388 chr2L 11056525 11056592 chr2L 11056657 11056724 20 132 7.0 8.5 7.8 2.3 199 chr2L 11056525 intron Samuel - chr2L 11056624 intron Samuel - chr2L 11056724 intron Samuel - chr2L_20_11055001 chr2L_11055001 RAL-850 389 chr2L 11174593 11174660 chr2L 11174715 11174747 29 111 7.5 5.0 6.2 4.0 154 chr2L 11174593 intron Ca-beta - chr2L 11174670 intron Ca-beta - chr2L 11174747 intron Ca-beta - chr2L_29_11170001 chr2L_11170001 RAL-850 390 chr2L 11191428 11191448 chr2L 11191555 11191575 9 127 13.0 8.0 10.5 0.8 147 chr2L 11191428 intron Ca-beta - chr2L 11191502 intron Ca-beta - chr2L 11191575 intron Ca-beta - chr2L_9_11190001 chr2L_11190001 RAL-850 391 chr2L 11255939 11255966 chr2L 11256063 11256092 7 116 13.5 23.0 18.2 0.4 153 chr2L 11255939 intron ab + chr2L 11256016 intron ab + chr2L 11256092 intron ab + chr2L_7_11255001 chr2L_11255001 RAL-850 392 chr2L 11281879 11281931 chr2L 11282006 11282059 9 127 16.0 4.0 10.0 0.8 180 chr2L 11281879 3` UTR Ppt2 + chr2L 11281969 intergenic Ppt2 +,mre11 + chr2L 11282059 intergenic mre11 +,Ppt2 + chr2L_9_11280001 chr2L_11280001 RAL-850 393 chr2L 11292328 11292404 chr2L 11292460 11292525 44 130 7.5 8.5 8.0 4.9 197 chr2L 11292328 intergenic not near genes chr2L 11292426 intergenic not near genes chr2L 11292525 intergenic not near genes chr2L_44_11290001 chr2L_11290001 RAL-850 394 chr2L 11298781 11298849 chr2L 11298908 11298976 24 127 6.5 0.0 3.2 5.7 195 chr2L 11298781 intergenic not near genes chr2L 11298878 intergenic not near genes chr2L 11298976 intergenic not near genes chr2L_24_11295001 chr2L_11295001 RAL-850 395 chr2L 11315218 11315271 chr2L 11317672 11317714 G2 21 2450 6.0 6.0 6.0 3.0 2496 chr2L 11315218 intergenic not near genes chr2L 11316466 intergenic not near genes chr2L 11317714 intergenic not near genes chr2L_21_11315001 chr2L_11315001 RAL-850 396 chr2L 11339686 11339739 chr2L 11339813 11339839 18 120 10.0 9.5 9.8 1.7 153 chr2L 11339686 intergenic not near genes chr2L 11339762 intergenic not near genes chr2L 11339839 intergenic not near genes chr2L_18_11335001 chr2L_11335001 RAL-850 397 chr2L 11348668 11348681 chr2L 11348818 11348831 4 149 18.5 3.0 10.8 0.3 163 chr2L 11348668 intergenic not near genes chr2L 11348750 intergenic not near genes chr2L 11348831 intergenic not near genes chr2L_4_11345001 chr2L_11345001 RAL-850 398 chr2L 11348683 11348715 chr2L 11348816 11348865 13 148 11.0 3.0 7.0 1.6 182 chr2L 11348683 intergenic not near genes chr2L 11348774 intergenic not near genes chr2L 11348865 intergenic not near genes chr2L_13_11345001 chr2L_11345001 RAL-850 399 chr2L 11379900 11379954 chr2L 11380032 11380086 6 131 13.5 0.0 6.8 0.8 186 chr2L 11379900 intergenic not near genes chr2L 11379993 intergenic not near genes chr2L 11380086 intergenic not near genes chr2L_6_11375001 chr2L_11375001 RAL-850 400 chr2L 11380560 11380635 chr2L 11380687 11380762 18 126 3.0 2.5 2.8 4.7 202 chr2L 11380560 intergenic not near genes chr2L 11380661 intergenic not near genes chr2L 11380762 intergenic not near genes chr2L_18_11380001 chr2L_11380001 RAL-850 401 chr2L 11394974 11394978 chr2L 11395101 11395105 4 127 29.0 1.0 15.0 0.2 131 chr2L 11394974 intergenic not near genes chr2L 11395040 intergenic not near genes chr2L 11395105 intergenic not near genes chr2L_4_11395001 chr2L_11395001 RAL-850 402 chr2L 11537076 11537144 chr2L 11537390 11537443 27 309 5.5 14.0 9.8 2.5 367 chr2L 11537076 intergenic CG43438 + chr2L 11537260 intergenic CG43438 + chr2L 11537443 intergenic not near genes chr2L_27_11535001 chr2L_11535001 RAL-850 403 chr2L 11540543 11540606 chr2L 11547995 11548058 Tabor 13 7452 10.0 6.5 8.2 1.4 7515 chr2L 11540543 intergenic not near genes chr2L 11544300 intergenic not near genes chr2L 11548058 intergenic not near genes chr2L_13_11540001 chr2L_11540001 RAL-850 404 chr2L 11563595 11563658 chr2L 11568849 11568912 copia 18 5252 7.5 9.0 8.2 2.0 5317 chr2L 11563595 intergenic not near genes chr2L 11566254 intergenic not near genes chr2L 11568912 intergenic not near genes chr2L_18_11565001 chr2L_11565001 RAL-850 405 chr2L 11614011 11614034 chr2L 11615556 11615558 hopper2 4 1540 18.0 9.0 13.5 0.3 1547 chr2L 11614011 intron kek2 + chr2L 11614784 intron kek2 + chr2L 11615558 intron kek2 + chr2L_4_11610001 chr2L_11610001 RAL-850 406 chr2L 11614043 11614085 chr2L 11615545 11615565 hopper2 25 1520 6.5 6.5 6.5 3.3 1522 chr2L 11614043 intron kek2 + chr2L 11614804 intron kek2 + chr2L 11615565 intron kek2 + chr2L_25_11610001 chr2L_11610001 RAL-850 407 chr2L 11661137 11661140 chr2L 11661275 11661278 4 138 17.0 9.0 13.0 0.3 141 chr2L 11661137 intergenic CR44497 - chr2L 11661208 intergenic CR44497 -,CR44479 - chr2L 11661278 intergenic CR44497 -,CR44479 - chr2L_4_11660001 chr2L_11660001 RAL-850 408 chr2L 11661141 11661210 chr2L 11661273 11661348 24 136 6.0 8.0 7.0 3.0 207 chr2L 11661141 intergenic CR44497 - chr2L 11661244 intergenic CR44497 -,CR44479 - chr2L 11661348 intergenic CR44479 -,CR44497 - chr2L_24_11660001 chr2L_11660001 RAL-850 409 chr2L 11672092 11672158 chr2L 11672249 11672315 23 157 6.5 8.5 7.5 2.7 223 chr2L 11672092 intergenic not near genes chr2L 11672204 intergenic not near genes chr2L 11672315 intergenic not near genes chr2L_23_11670001 chr2L_11670001 RAL-850 410 chr2L 11713464 11713539 chr2L 11720982 11721031 blood 32 7511 7.0 10.0 8.5 3.4 7567 chr2L 11713464 intergenic not near genes chr2L 11717248 intergenic not near genes chr2L 11721031 intergenic CR44143 + chr2L_32_11715001 chr2L_11715001 RAL-850 411 chr2L 11723053 11723121 chr2L 11723179 11723252 21 126 5.0 6.5 5.8 3.1 199 chr2L 11723053 intergenic not near genes chr2L 11723152 intergenic not near genes chr2L 11723252 intergenic not near genes chr2L_21_11720001 chr2L_11720001 RAL-850 412 chr2L 11750275 11750341 chr2L 11750611 11750677 27 336 6.0 5.0 5.5 4.2 402 chr2L 11750275 intergenic not near genes chr2L 11750476 intergenic not near genes chr2L 11750677 intergenic not near genes chr2L_27_11750001 chr2L_11750001 RAL-850 413 chr2L 11784496 11784508 chr2L 11784623 11784635 6 127 5.0 5.5 5.2 1.0 139 chr2L 11784496 intergenic not near genes chr2L 11784566 intergenic not near genes chr2L 11784635 intergenic not near genes chr2L_6_11780001 chr2L_11780001 RAL-850 414 chr2L 11825656 11825671 chr2L 11825785 11825800 4 129 20.5 0.0 10.2 0.4 144 chr2L 11825656 intron Pde1c - chr2L 11825728 intron Pde1c - chr2L 11825800 intron Pde1c - chr2L_4_11825001 chr2L_11825001 RAL-850 415 chr2L 11944390 11944420 chr2L 11944530 11944560 6 137 17.5 0.0 8.8 0.6 170 chr2L 11944390 intron Cry + chr2L 11944475 intron Cry + chr2L 11944560 intron Cry + chr2L_6_11940001 chr2L_11940001 RAL-850 416 chr2L 12067287 12067339 chr2L 12074389 12074441 297 18 7102 12.0 7.5 9.8 1.7 7154 chr2L 12067287 intergenic not near genes chr2L 12070864 intergenic not near genes chr2L 12074441 intergenic not near genes chr2L_18_12070001 chr2L_12070001 RAL-850 417 chr2L 12132690 12132738 chr2L 12132826 12132874 13 136 0.5 11.5 6.0 1.9 184 chr2L 12132690 intron rho-6 - chr2L 12132782 intron rho-6 - chr2L 12132874 intron rho-6 - chr2L_13_12130001 chr2L_12130001 RAL-850 418 chr2L 12198315 12198342 chr2L 12198444 12198471 6 129 8.5 10.0 9.2 0.6 156 chr2L 12198315 intron aret + chr2L 12198393 intron aret + chr2L 12198471 intron aret + chr2L_6_12195001 chr2L_12195001 RAL-850 419 chr2L 12209996 12210038 chr2L 12210134 12210176 15 137 11.5 7.0 9.2 1.5 180 chr2L 12209996 intron,3` UTR aret +,CG31759 + chr2L 12210086 intron aret + chr2L 12210176 intron aret + chr2L_15_12210001 chr2L_12210001 RAL-850 420 chr2L 12233688 12233759 chr2L 12233816 12233887 29 125 6.0 7.0 6.5 3.9 199 chr2L 12233688 intron aret + chr2L 12233788 intron aret + chr2L 12233887 intron aret + chr2L_29_12230001 chr2L_12230001 RAL-850 421 chr2L 12234008 12234061 chr2L 12234143 12234206 23 142 4.0 8.0 6.0 3.3 198 chr2L 12234008 intron aret + chr2L 12234107 intron aret + chr2L 12234206 intron aret + chr2L_23_12230001 chr2L_12230001 RAL-850 422 chr2L 12245478 12245539 chr2L 12245608 12245676 14 135 3.5 3.0 3.2 3.3 198 chr2L 12245478 intron aret + chr2L 12245577 intron aret + chr2L 12245676 intron aret + chr2L_14_12245001 chr2L_12245001 RAL-850 423 chr2L 12269363 12269400 chr2L 12269491 12269528 15 128 9.5 5.0 7.2 1.8 165 chr2L 12269363 intron aret + chr2L 12269446 intron aret + chr2L 12269528 intron aret + chr2L_15_12265001 chr2L_12265001 RAL-850 424 chr2L 12294200 12294275 chr2L 12294332 12294418 11 136 2.0 0.0 1.0 5.5 218 chr2L 12294200 intron aret + chr2L 12294309 intron aret + chr2L 12294418 intron aret + chr2L_11_12290001 chr2L_12290001 RAL-850 425 chr2L 12305366 12305384 chr2L 12305504 12305522 7 137 18.0 12.0 15.0 0.4 156 chr2L 12305366 intron aret + chr2L 12305444 intron aret + chr2L 12305522 intron aret + chr2L_7_12305001 chr2L_12305001 RAL-850 426 chr2L 12305386 12305436 chr2L 12305497 12305570 24 134 9.5 9.5 9.5 2.3 184 chr2L 12305386 intron aret + chr2L 12305478 intron aret + chr2L 12305570 intron aret + chr2L_24_12305001 chr2L_12305001 RAL-850 427 chr2L 12349594 12349659 chr2L 12349728 12349803 20 143 4.5 6.5 5.5 3.1 209 chr2L 12349594 intron bru-2 + chr2L 12349698 intron bru-2 + chr2L 12349803 intron bru-2 + chr2L_20_12345001 chr2L_12345001 RAL-850 428 chr2L 12366816 12366883 chr2L 12366952 12367019 24 136 7.5 8.5 8.0 2.7 203 chr2L 12366816 intron bru-2 + chr2L 12366918 intron bru-2 + chr2L 12367019 intron bru-2 + chr2L_24_12365001 chr2L_12365001 RAL-850 429 chr2L 12426085 12426110 chr2L 12426218 12426239 6 130 26.5 8.5 17.5 0.3 154 chr2L 12426085 exon CG6405 + chr2L 12426162 exon CG6405 + chr2L 12426239 exon CG6405 + chr2L_6_12425001 chr2L_12425001 RAL-850 430 chr2L 12426112 12426161 chr2L 12426214 12426269 24 114 14.0 9.0 11.5 1.9 157 chr2L 12426112 exon CG6405 + chr2L 12426190 exon CG6405 + chr2L 12426269 exon CG6405 + chr2L_24_12425001 chr2L_12425001 RAL-850 431 chr2L 12487852 12487913 chr2L 12487975 12488044 27 130 14.0 14.0 14.0 1.8 192 chr2L 12487852 intron bun - chr2L 12487948 intron bun - chr2L 12488044 intron bun - chr2L_27_12485001 chr2L_12485001 RAL-850 432 chr2L 12499003 12499017 chr2L 12499130 12499144 6 127 0.0 12.5 6.2 0.8 141 chr2L 12499003 intron bun - chr2L 12499074 intron bun - chr2L 12499144 intron bun - chr2L_6_12495001 chr2L_12495001 RAL-850 433 chr2L 12529200 12529385 chr2L 12529383 12529511 19 165 0.0 0.0 0.0 19.0 311 chr2L 12529200 intron bun - chr2L 12529356 intron bun - chr2L 12529511 intron bun - chr2L_19_12525001 chr2L_12525001 RAL-850 434 chr2L 12547413 12547453 chr2L 12547547 12547587 10 134 4.5 0.0 2.2 3.1 174 chr2L 12547413 intergenic not near genes chr2L 12547500 intergenic not near genes chr2L 12547587 intergenic not near genes chr2L_10_12545001 chr2L_12545001 RAL-850 435 chr2L 12558277 12558343 chr2L 12565456 12565522 HMS-Beagle 27 7177 7.5 8.5 8.0 3.0 7245 chr2L 12558277 intergenic not near genes chr2L 12561900 intergenic not near genes chr2L 12565522 intergenic not near genes chr2L_27_12560001 chr2L_12560001 RAL-850 436 chr2L 12567447 12567462 chr2L 12567596 12567611 7 149 9.0 0.5 4.8 1.2 164 chr2L 12567447 intergenic not near genes chr2L 12567529 intergenic not near genes chr2L 12567611 intergenic not near genes chr2L_7_12565001 chr2L_12565001 RAL-850 437 chr2L 12583115 12583184 chr2L 12583326 12583395 26 211 8.5 4.5 6.5 3.5 280 chr2L 12583115 5` UTR CR44595 + chr2L 12583255 5` UTR CR44595 + chr2L 12583395 5` UTR CR44595 + chr2L_26_12580001 chr2L_12580001 RAL-850 438 chr2L 12586977 12587052 chr2L 12587104 12587179 28 123 5.0 7.0 6.0 4.0 202 chr2L 12586977 intergenic not near genes chr2L 12587078 intergenic not near genes chr2L 12587179 intergenic nub + chr2L_28_12585001 chr2L_12585001 RAL-850 439 chr2L 12619856 12619905 chr2L 12619979 12620004 17 123 10.5 8.0 9.2 1.7 148 chr2L 12619856 intron,intron nub +,Ref2 - chr2L 12619930 intron,intron nub +,Ref2 - chr2L 12620004 intron,intron nub +,Ref2 - chr2L_17_12615001 chr2L_12615001 RAL-850 440 chr2L 12653740 12653811 chr2L 12653907 12653978 23 167 4.0 6.5 5.2 3.7 238 chr2L 12653740 intergenic not near genes chr2L 12653859 intergenic not near genes chr2L 12653978 intergenic not near genes chr2L_23_12650001 chr2L_12650001 RAL-850 441 chr2L 12717347 12717360 chr2L 12717479 12717499 10 138 1.5 13.5 7.5 1.2 152 chr2L 12717347 intron Pih1D1 - chr2L 12717423 intron Pih1D1 - chr2L 12717499 intron Pih1D1 - chr2L_10_12715001 chr2L_12715001 RAL-850 442 chr2L 12718596 12718667 chr2L 12718729 12718800 33 132 4.0 8.0 6.0 4.7 204 chr2L 12718596 intron Pih1D1 - chr2L 12718698 intron Pih1D1 - chr2L 12718800 intron Pih1D1 - chr2L_33_12715001 chr2L_12715001 RAL-850 443 chr2L 12731018 12731081 chr2L 12735835 12735897 F-element 20 4817 4.0 8.0 6.0 2.9 4879 chr2L 12731018 intron MRP + chr2L 12733458 intron MRP + chr2L 12735897 intron MRP + chr2L_20_12730001 chr2L_12730001 RAL-850 444 chr2L 12739132 12739138 chr2L 12743963 12743969 Doc 6 4831 18.0 12.5 15.2 0.4 4837 chr2L 12739132 exon MRP + chr2L 12741550 intron MRP + chr2L 12743969 intron MRP + chr2L_6_12740001 chr2L_12740001 RAL-850 445 chr2L 12739144 12739195 chr2L 12743959 12744026 Doc 22 4830 6.5 12.0 9.2 2.2 4882 chr2L 12739144 exon MRP + chr2L 12741585 intron MRP + chr2L 12744026 exon MRP + chr2L_22_12740001 chr2L_12740001 RAL-850 446 chr2L 12751262 12751331 chr2L 12751395 12751464 26 130 6.5 6.5 6.5 3.5 202 chr2L 12751262 intergenic not near genes chr2L 12751363 intergenic not near genes chr2L 12751464 intergenic not near genes chr2L_26_12750001 chr2L_12750001 RAL-850 447 chr2L 12763781 12763869 chr2L 12764043 12764131 BS 11 261 0.0 0.0 0.0 11.0 350 chr2L 12763781 intergenic not near genes chr2L 12763956 intergenic not near genes chr2L 12764131 intergenic not near genes chr2L_11_12760001 chr2L_12760001 RAL-850 448 chr2L 12781761 12781811 chr2L 12789261 12789311 Quasimodo 11 7500 14.5 7.0 10.8 0.9 7550 chr2L 12781761 intergenic not near genes chr2L 12785536 intergenic not near genes chr2L 12789311 intergenic not near genes chr2L_11_12785001 chr2L_12785001 RAL-850 449 chr2L 12791569 12791579 chr2L 12795294 12795304 F-element 5 3725 15.5 14.5 15.0 0.3 3735 chr2L 12791569 intergenic not near genes chr2L 12793436 intergenic not near genes chr2L 12795304 intergenic not near genes chr2L_5_12790001 chr2L_12790001 RAL-850 450 chr2L 12791585 12791625 chr2L 12795279 12795350 F-element 19 3718 6.5 10.5 8.5 2.0 3765 chr2L 12791585 intergenic not near genes chr2L 12793468 intergenic not near genes chr2L 12795350 intergenic not near genes chr2L_19_12790001 chr2L_12790001 RAL-850 451 chr2L 12807406 12807447 chr2L 12807535 12807576 14 126 8.5 7.0 7.8 1.6 170 chr2L 12807406 intergenic CR43818 - chr2L 12807491 intergenic CR43818 - chr2L 12807576 intergenic CR43818 - chr2L_14_12805001 chr2L_12805001 RAL-850 452 chr2L 12848376 12848463 chr2L 12848518 12848601 34 140 7.0 8.5 7.8 3.9 225 chr2L 12848376 intergenic not near genes chr2L 12848488 intergenic not near genes chr2L 12848601 intergenic not near genes chr2L_34_12845001 chr2L_12845001 RAL-850 453 chr2L 12861657 12861726 chr2L 12863174 12863236 hobo 30 1513 9.5 14.5 12.0 2.3 1579 chr2L 12861657 intergenic not near genes chr2L 12862446 intergenic not near genes chr2L 12863236 intergenic not near genes chr2L_30_12860001 chr2L_12860001 RAL-850 454 chr2L 12893999 12894024 chr2L 12895504 12895541 hobo 10 1512 12.5 14.0 13.2 0.7 1542 chr2L 12893999 intergenic not near genes chr2L 12894770 intergenic not near genes chr2L 12895541 intergenic not near genes chr2L_10_12890001 chr2L_12890001 RAL-850 455 chr2L 12894031 12894048 chr2L 12895488 12895507 hobo 9 1488 8.0 10.5 9.2 0.9 1476 chr2L 12894031 intergenic not near genes chr2L 12894769 intergenic not near genes chr2L 12895507 intergenic not near genes chr2L_9_12890001 chr2L_12890001 RAL-850 456 chr2L 12905427 12905492 chr2L 12905561 12905626 22 131 7.5 5.0 6.2 3.1 199 chr2L 12905427 intergenic not near genes chr2L 12905526 intergenic not near genes chr2L 12905626 intergenic not near genes chr2L_22_12905001 chr2L_12905001 RAL-850 457 chr2L 12933807 12933818 chr2L 12941324 12941335 blood 9 7517 29.5 9.5 19.5 0.4 7528 chr2L 12933807 intergenic not near genes chr2L 12937571 intergenic not near genes chr2L 12941335 intergenic not near genes chr2L_9_12935001 chr2L_12935001 RAL-850 458 chr2L 12933819 12933881 chr2L 12941321 12941369 blood 34 7512 12.5 8.5 10.5 3.0 7550 chr2L 12933819 intergenic not near genes chr2L 12937594 intergenic not near genes chr2L 12941369 intergenic not near genes chr2L_34_12935001 chr2L_12935001 RAL-850 459 chr2L 13139408 13139432 chr2L 13139546 13139550 11 133 24.0 15.0 19.5 0.5 142 chr2L 13139408 intergenic not near genes chr2L 13139479 intergenic not near genes chr2L 13139550 intergenic not near genes chr2L_11_13135001 chr2L_13135001 RAL-850 460 chr2L 13139436 13139488 chr2L 13139544 13139570 33 119 9.0 13.5 11.2 2.7 134 chr2L 13139436 intergenic not near genes chr2L 13139503 intergenic not near genes chr2L 13139570 intergenic not near genes chr2L_33_13135001 chr2L_13135001 RAL-850 461 chr2L 13154060 13154121 chr2L 13154188 13154249 15 128 8.5 0.0 4.2 2.9 189 chr2L 13154060 intergenic not near genes chr2L 13154154 intergenic not near genes chr2L 13154249 intergenic not near genes chr2L_15_13150001 chr2L_13150001 RAL-850 462 chr2L 13204265 13204338 chr2L 13204414 13204487 8 145 6.0 9.5 7.8 0.9 222 chr2L 13204265 exon Pect + chr2L 13204376 intron Pect + chr2L 13204487 intron Pect + chr2L_8_13200001 chr2L_13200001 RAL-850 463 chr2L 13241915 13241925 chr2L 13244349 13244357 BS 7 2434 18.5 8.0 13.2 0.5 2442 chr2L 13241915 5` UTR CR45330 + chr2L 13243136 intron CR45330 + chr2L 13244357 5` UTR CR45330 + chr2L_7_13240001 chr2L_13240001 RAL-850 464 chr2L 13294887 13294896 chr2L 13295013 13295022 4 126 7.5 0.0 3.8 0.8 135 chr2L 13294887 intron CG31729 + chr2L 13294954 intron CG31729 + chr2L 13295022 intron CG31729 + chr2L_4_13290001 chr2L_13290001 RAL-850 465 chr2L 13316883 13316906 chr2L 13317016 13317039 6 132 4.0 6.0 5.0 1.0 156 chr2L 13316883 intron CG43778 - chr2L 13316961 intron CG43778 - chr2L 13317039 intron CG43778 - chr2L_6_13315001 chr2L_13315001 RAL-850 466 chr2L 13405621 13405669 chr2L 13410453 13410516 Doc 33 4845 9.0 15.0 12.0 2.5 4895 chr2L 13405621 exon CG7110 + chr2L 13408068 intron CG7110 + chr2L 13410516 exon CG7110 + chr2L_33_13405001 chr2L_13405001 RAL-850 467 chr2L 13410791 13410853 chr2L 13410921 13410983 28 130 16.0 7.5 11.8 2.2 192 chr2L 13410791 3` UTR CG7110 + chr2L 13410887 3` UTR CG7110 + chr2L 13410983 3` UTR CG7110 + chr2L_28_13410001 chr2L_13410001 RAL-850 468 chr2L 13422403 13422492 chr2L 13422553 13422621 9 143 1.5 12.0 6.8 1.2 218 chr2L 13422403 intron CG42784 + chr2L 13422512 intron CG42784 + chr2L 13422621 intron CG42784 + chr2L_9_13420001 chr2L_13420001 RAL-850 469 chr2L 13437304 13437373 chr2L 13437434 13437507 15 132 6.0 0.0 3.0 3.8 203 chr2L 13437304 intron,intron CG42784 +,Tehao + chr2L 13437406 intron,intron CG42784 +,Tehao + chr2L 13437507 intron,intron CG42784 +,Tehao + chr2L_15_13435001 chr2L_13435001 RAL-850 470 chr2L 13447264 13447298 chr2L 13447370 13447426 18 117 19.0 10.5 14.8 1.1 162 chr2L 13447264 intron CG42784 + chr2L 13447345 intron CG42784 + chr2L 13447426 intron CG42784 + chr2L_18_13445001 chr2L_13445001 RAL-850 471 chr2L 13447306 13447319 chr2L 13447367 13447447 8 119 11.5 11.5 11.5 0.6 141 chr2L 13447306 intron CG42784 + chr2L 13447376 intron CG42784 + chr2L 13447447 intron CG42784 + chr2L_8_13445001 chr2L_13445001 RAL-850 472 chr2L 13449416 13449490 chr2L 13456902 13456976 Quasimodo 22 7486 7.5 11.5 9.5 2.1 7560 chr2L 13449416 intron,intron CG42784 +,Hsp60D - chr2L 13453196 intron CG42784 + chr2L 13456976 intron CG42784 + chr2L_22_13450001 chr2L_13450001 RAL-850 473 chr2L 13481414 13481447 chr2L 13482071 13482104 jockey 14 656 20.0 16.0 18.0 0.7 690 chr2L 13481414 intron CG42784 + chr2L 13481759 intron CG42784 + chr2L 13482104 intron CG42784 + chr2L_14_13480001 chr2L_13480001 RAL-850 474 chr2L 13481448 13481464 chr2L 13482068 13482121 jockey 10 652 16.0 15.0 15.5 0.6 673 chr2L 13481448 intron CG42784 + chr2L 13481784 intron CG42784 + chr2L 13482121 intron CG42784 + chr2L_10_13480001 chr2L_13480001 RAL-850 475 chr2L 13493286 13493364 chr2L 13493619 13493695 34 330 5.5 10.0 7.8 3.9 409 chr2L 13493286 intron CG42784 + chr2L 13493490 intron CG42784 + chr2L 13493695 intron CG42784 + chr2L_34_13490001 chr2L_13490001 RAL-850 476 chr2L 13556580 13556608 chr2L 13556711 13556738 14 130 4.5 0.0 2.2 4.4 158 chr2L 13556580 intron kuz + chr2L 13556659 intron kuz + chr2L 13556738 intron kuz + chr2L_14_13555001 chr2L_13555001 RAL-850 477 chr2L 13577360 13577386 chr2L 13577488 13577514 11 128 6.0 20.0 13.0 0.8 154 chr2L 13577360 intron kuz + chr2L 13577437 intron kuz + chr2L 13577514 intron kuz + chr2L_11_13575001 chr2L_13575001 RAL-850 478 chr2L 13622090 13622170 chr2L 13622239 13622319 16 141 8.0 8.0 8.0 1.8 229 chr2L 13622090 intron kuz + chr2L 13622204 intron kuz + chr2L 13622319 intron kuz + chr2L_16_13620001 chr2L_13620001 RAL-850 479 chr2L 13630218 13630287 chr2L 13630358 13630433 25 143 2.0 9.0 5.5 3.8 215 chr2L 13630218 intron kuz + chr2L 13630326 intron kuz + chr2L 13630433 intron kuz + chr2L_25_13630001 chr2L_13630001 RAL-850 480 chr2L 13692980 13693035 chr2L 13693085 13693158 19 123 7.5 6.5 7.0 2.4 178 chr2L 13692980 intron CG31814 - chr2L 13693069 intron CG31814 - chr2L 13693158 intron CG31814 - chr2L_19_13690001 chr2L_13690001 RAL-850 481 chr2L 13712806 13712847 chr2L 13712942 13712983 21 134 6.0 10.0 8.0 2.3 177 chr2L 13712806 intron CG31814 - chr2L 13712894 intron CG31814 - chr2L 13712983 intron CG31814 - chr2L_21_13710001 chr2L_13710001 RAL-850 482 chr2L 13713512 13713574 chr2L 13713638 13713700 19 126 2.0 6.5 4.2 3.7 188 chr2L 13713512 intron CG31814 - chr2L 13713606 intron CG31814 - chr2L 13713700 intron CG31814 - chr2L_19_13710001 chr2L_13710001 RAL-850 483 chr2L 13715094 13715172 chr2L 13715359 13715427 27 257 3.0 6.5 4.8 4.7 333 chr2L 13715094 intron CG31814 - chr2L 13715260 intron CG31814 - chr2L 13715427 intron CG31814 - chr2L_27_13715001 chr2L_13715001 RAL-850 484 chr2L 13727571 13727633 chr2L 13727689 13727763 23 128 11.5 11.5 11.5 1.8 192 chr2L 13727571 intergenic not near genes chr2L 13727667 intergenic not near genes chr2L 13727763 intergenic not near genes chr2L_23_13725001 chr2L_13725001 RAL-850 485 chr2L 13740029 13740092 chr2L 13740157 13740212 12 127 2.0 7.5 4.8 2.1 183 chr2L 13740029 intergenic not near genes chr2L 13740120 intergenic not near genes chr2L 13740212 intergenic not near genes chr2L_12_13740001 chr2L_13740001 RAL-850 486 chr2L 13761770 13761822 chr2L 13762931 13762983 Doc 16 1159 12.5 11.5 12.0 1.2 1213 chr2L 13761770 intron TM9SF4 + chr2L 13762376 intron TM9SF4 + chr2L 13762983 intron TM9SF4 + chr2L_16_13760001 chr2L_13760001 RAL-850 487 chr2L 13800146 13800204 chr2L 13800300 13800358 16 154 4.5 10.5 7.5 1.9 212 chr2L 13800146 intergenic Sec71 + chr2L 13800252 intergenic not near genes chr2L 13800358 intergenic not near genes chr2L_16_13800001 chr2L_13800001 RAL-850 488 chr2L 13853048 13853118 chr2L 13862248 13862328 roo 36 9202 8.5 0.5 4.5 6.5 9280 chr2L 13853048 intron CenG1A + chr2L 13857688 intron CenG1A + chr2L 13862328 intron CenG1A + chr2L_36_13855001 chr2L_13855001 RAL-850 489 chr2L 13919936 13919943 chr2L 13920037 13920054 4 118 1.0 14.5 7.8 0.5 118 chr2L 13919936 intron Ance-3 + chr2L 13919995 intron Ance-3 + chr2L 13920054 intron Ance-3 + chr2L_4_13915001 chr2L_13915001 RAL-850 490 chr2L 13944367 13944434 chr2L 13944537 13944604 9 170 8.0 5.0 6.5 1.2 237 chr2L 13944367 intron Ance-3 + chr2L 13944486 intron Ance-3 + chr2L 13944604 intron Ance-3 + chr2L_9_13940001 chr2L_13940001 RAL-850 491 chr2L 13987164 13987237 chr2L 13987295 13987368 23 131 8.0 9.5 8.8 2.3 204 chr2L 13987164 intron rk - chr2L 13987266 intron rk - chr2L 13987368 intron rk - chr2L_23_13985001 chr2L_13985001 RAL-850 492 chr2L 14020367 14020409 chr2L 14020499 14020541 16 132 4.5 6.5 5.5 2.5 174 chr2L 14020367 intergenic CR44849 +,NimC3 - chr2L 14020454 intergenic CR44849 +,NimC3 - chr2L 14020541 intergenic CR44849 +,NimC3 - chr2L_16_14020001 chr2L_14020001 RAL-850 493 chr2L 14080251 14080301 chr2L 14080390 14080435 22 136 5.0 21.0 13.0 1.6 184 chr2L 14080251 intron nAChRalpha5 + chr2L 14080343 intron nAChRalpha5 + chr2L 14080435 intron nAChRalpha5 + chr2L_22_14080001 chr2L_14080001 RAL-850 494 chr2L 14086650 14086686 chr2L 14086768 14086819 17 139 0.0 12.0 6.0 2.4 169 chr2L 14086650 intron nAChRalpha5 + chr2L 14086734 intron nAChRalpha5 + chr2L 14086819 intron nAChRalpha5 + chr2L_17_14085001 chr2L_14085001 RAL-850 495 chr2L 14096107 14096126 chr2L 14096248 14096261 5 137 22.0 0.0 11.0 0.4 154 chr2L 14096107 intergenic not near genes chr2L 14096184 intergenic not near genes chr2L 14096261 intergenic not near genes chr2L_5_14095001 chr2L_14095001 RAL-850 496 chr2L 14109479 14109538 chr2L 14109620 14109679 7 141 7.0 9.0 8.0 0.8 200 chr2L 14109479 intergenic CG15293 -,CG31769 - chr2L 14109579 intergenic CG31769 -,CG15293 - chr2L 14109679 3` UTR CG31769 - chr2L_7_14105001 chr2L_14105001 RAL-850 497 chr2L 14125146 14125189 chr2L 14125532 14125605 13 412 4.5 9.0 6.8 1.7 459 chr2L 14125146 intergenic not near genes chr2L 14125376 intergenic not near genes chr2L 14125605 intergenic not near genes chr2L_13_14125001 chr2L_14125001 RAL-850 498 chr2L 14199173 14199247 chr2L 14199337 14199412 27 163 7.0 7.0 7.0 3.4 239 chr2L 14199173 intron Dyrk2 - chr2L 14199292 intron Dyrk2 - chr2L 14199412 intron Dyrk2 - chr2L_27_14195001 chr2L_14195001 RAL-850 499 chr2L 14222259 14222281 chr2L 14222396 14222417 8 137 12.5 10.5 11.5 0.6 158 chr2L 14222259 intron Dyrk2 - chr2L 14222338 intron Dyrk2 - chr2L 14222417 intron Dyrk2 - chr2L_8_14220001 chr2L_14220001 RAL-850 500 chr2L 14222282 14222325 chr2L 14222388 14222462 21 133 7.5 9.0 8.2 2.3 180 chr2L 14222282 intron Dyrk2 - chr2L 14222372 intron Dyrk2 - chr2L 14222462 intron Dyrk2 - chr2L_21_14220001 chr2L_14220001 RAL-850 501 chr2L 14240488 14240570 chr2L 14240630 14240712 17 141 7.0 5.0 6.0 2.4 224 chr2L 14240488 intergenic not near genes chr2L 14240600 intergenic CR44216 + chr2L 14240712 intergenic CR44216 + chr2L_17_14240001 chr2L_14240001 RAL-850 502 chr2L 14246237 14246311 chr2L 14246364 14246448 11 130 7.5 3.5 5.5 1.7 211 chr2L 14246237 intergenic not near genes chr2L 14246342 intergenic not near genes chr2L 14246448 intergenic not near genes chr2L_11_14245001 chr2L_14245001 RAL-850 503 chr2L 14251440 14251465 chr2L 14251577 14251602 9 137 15.0 8.0 11.5 0.7 162 chr2L 14251440 intergenic not near genes chr2L 14251521 intergenic not near genes chr2L 14251602 intergenic not near genes chr2L_9_14250001 chr2L_14250001 RAL-850 504 chr2L 14291224 14291236 chr2L 14291515 14291527 8 291 19.5 9.5 14.5 0.5 303 chr2L 14291224 intron,5` UTR wb +,CR43639 + chr2L 14291376 intron,5` UTR wb +,CR43639 + chr2L 14291527 intron,5` UTR wb +,CR43639 + chr2L_8_14290001 chr2L_14290001 RAL-850 505 chr2L 14291237 14291290 chr2L 14291514 14291581 35 288 6.5 9.5 8.0 3.9 344 chr2L 14291237 intron,5` UTR wb +,CR43639 + chr2L 14291409 intron,5` UTR wb +,CR43639 + chr2L 14291581 intron,5` UTR wb +,CR43639 + chr2L_35_14290001 chr2L_14290001 RAL-850 506 chr2L 14396158 14396213 chr2L 14398964 14399019 30 2806 44.5 39.5 42.0 0.7 2861 chr2L 14396158 intron elB - chr2L 14397588 intron elB - chr2L 14399019 intron elB - chr2L_30_14395001 chr2L_14395001 RAL-850 507 chr2L 14396034 14396110 chr2L 14399093 14399169 39 3060 63.5 64.0 63.8 0.6 3135 chr2L 14396034 intron elB - chr2L 14397602 intron elB - chr2L 14399169 intron elB - chr2L_39_14395001 chr2L_14395001 RAL-850 508 chr2L 14429385 14429454 chr2L 14429516 14429585 31 130 11.5 9.5 10.5 2.7 200 chr2L 14429385 3` UTR CR44732 - chr2L 14429485 3` UTR CR44732 - chr2L 14429585 3` UTR CR44732 - chr2L_31_14425001 chr2L_14425001 RAL-850 509 chr2L 14462678 14462820 chr2L 14462815 14462966 7 138 0.0 0.0 0.0 7.0 288 chr2L 14462678 intergenic not near genes chr2L 14462822 intergenic not near genes chr2L 14462966 intergenic not near genes chr2L_7_14460001 chr2L_14460001 RAL-850 510 chr2L 14503394 14503434 chr2L 14503513 14503562 12 127 8.0 4.0 6.0 1.7 168 chr2L 14503394 intergenic not near genes chr2L 14503478 intergenic not near genes chr2L 14503562 intergenic not near genes chr2L_12_14500001 chr2L_14500001 RAL-850 511 chr2L 14570694 14570719 chr2L 14570825 14570850 7 131 1.5 16.5 9.0 0.7 156 chr2L 14570694 intergenic not near genes chr2L 14570772 intergenic not near genes chr2L 14570850 intergenic not near genes chr2L_7_14570001 chr2L_14570001 RAL-850 512 chr2L 14588331 14588408 chr2L 14588539 14588593 19 206 0.5 12.5 6.5 2.5 262 chr2L 14588331 intergenic CG42680 - chr2L 14588462 intergenic CG42680 - chr2L 14588593 intergenic CG42680 - chr2L_19_14585001 chr2L_14585001 RAL-850 513 chr2L 14588650 14588667 chr2L 14588991 14589008 8 341 10.0 8.5 9.2 0.8 358 chr2L 14588650 intergenic CG42680 - chr2L 14588829 intergenic not near genes chr2L 14589008 intergenic not near genes chr2L_8_14585001 chr2L_14585001 RAL-850 514 chr2L 14618868 14618887 chr2L 14619299 14619318 jockey 10 431 8.0 6.5 7.2 1.2 450 chr2L 14618868 intron,3` UTR,3` UTR osp -,Adh +,Adhr + chr2L 14619093 intron osp - chr2L 14619318 intron osp - chr2L_10_14615001 chr2L_14615001 RAL-850 515 chr2L 14624525 14624558 chr2L 14624654 14624687 5 129 2.0 5.0 3.5 1.1 162 chr2L 14624525 intron osp - chr2L 14624606 intron osp - chr2L 14624687 intron osp - chr2L_5_14620001 chr2L_14620001 RAL-850 516 chr2L 14642531 14642592 chr2L 14651744 14651805 roo 22 9212 9.5 11.5 10.5 1.9 9274 chr2L 14642531 intron osp - chr2L 14647168 intron osp - chr2L 14651805 intron osp - chr2L_22_14645001 chr2L_14645001 RAL-850 517 chr2L 14693866 14693889 chr2L 14694004 14694027 6 135 7.5 5.0 6.2 0.8 161 chr2L 14693866 intergenic not near genes chr2L 14693946 intergenic not near genes chr2L 14694027 intergenic not near genes chr2L_6_14690001 chr2L_14690001 RAL-850 518 chr2L 14693890 14693937 chr2L 14693999 14694075 20 132 1.5 3.0 2.2 6.2 185 chr2L 14693890 intergenic not near genes chr2L 14693982 intergenic not near genes chr2L 14694075 intergenic not near genes chr2L_20_14690001 chr2L_14690001 RAL-850 519 chr2L 14707162 14707234 chr2L 14707331 14707403 23 168 6.0 0.5 3.2 5.5 241 chr2L 14707162 intergenic not near genes chr2L 14707282 intergenic not near genes chr2L 14707403 intergenic not near genes chr2L_23_14705001 chr2L_14705001 RAL-850 520 chr2L 14778776 14778830 chr2L 14779096 14779168 29 329 13.0 8.5 10.8 2.5 392 chr2L 14778776 intergenic not near genes chr2L 14778972 intergenic not near genes chr2L 14779168 intergenic not near genes chr2L_29_14775001 chr2L_14775001 RAL-850 521 chr2L 14782451 14782461 chr2L 14782584 14782594 5 133 9.0 7.5 8.2 0.5 143 chr2L 14782451 intergenic not near genes chr2L 14782522 intergenic not near genes chr2L 14782594 intergenic not near genes chr2L_5_14780001 chr2L_14780001 RAL-850 522 chr2L 14787085 14787091 chr2L 14787211 14787217 5 126 15.0 0.5 7.8 0.6 132 chr2L 14787085 intergenic not near genes chr2L 14787151 intergenic not near genes chr2L 14787217 intergenic not near genes chr2L_5_14785001 chr2L_14785001 RAL-850 523 chr2L 14803836 14803905 chr2L 14809084 14809158 copia 36 5252 8.0 8.5 8.2 3.9 5322 chr2L 14803836 intergenic not near genes chr2L 14806497 intergenic not near genes chr2L 14809158 intergenic not near genes chr2L_36_14805001 chr2L_14805001 RAL-850 524 chr2L 14840927 14841005 chr2L 14841065 14841142 28 136 8.5 11.5 10.0 2.5 215 chr2L 14840927 3` UTR CR43805 - chr2L 14841034 3` UTR CR43805 - chr2L 14841142 3` UTR CR43805 - chr2L_28_14840001 chr2L_14840001 RAL-850 525 chr2L 14864488 14864558 chr2L 14864621 14864691 28 132 4.0 7.0 5.5 4.3 203 chr2L 14864488 intergenic not near genes chr2L 14864590 intergenic not near genes chr2L 14864691 intergenic not near genes chr2L_28_14860001 chr2L_14860001 RAL-850 526 chr2L 14883283 14883309 chr2L 14883491 14883517 5 204 7.5 12.0 9.8 0.5 234 chr2L 14883283 intron Mst35Bb - chr2L 14883400 intron Mst35Bb - chr2L 14883517 intron Mst35Bb - chr2L_5_14880001 chr2L_14880001 RAL-850 527 chr2L 14889908 14889968 chr2L 14890383 14890443 jockey 29 475 10.0 5.0 7.5 3.4 535 chr2L 14889908 intergenic not near genes chr2L 14890176 intergenic not near genes chr2L 14890443 intergenic not near genes chr2L_29_14890001 chr2L_14890001 RAL-850 528 chr2L 14950402 14950481 chr2L 14950927 14951006 36 522 5.0 8.5 6.8 4.6 604 chr2L 14950402 intron CG42313 - chr2L 14950704 intron CG42313 - chr2L 14951006 intron CG42313 - chr2L_36_14950001 chr2L_14950001 RAL-850 529 chr2L 14984348 14984401 chr2L 14991987 14992053 opus 12 7647 7.5 7.0 7.2 1.5 7705 chr2L 14984348 intron mol - chr2L 14988200 intron mol - chr2L 14992053 intron mol - chr2L_12_14985001 chr2L_14985001 RAL-850 530 chr2L 15003497 15003567 chr2L 15003631 15003671 36 132 8.5 7.0 7.8 4.1 174 chr2L 15003497 intergenic not near genes chr2L 15003584 intergenic not near genes chr2L 15003671 intergenic not near genes chr2L_36_15000001 chr2L_15000001 RAL-850 531 chr2L 15013103 15013149 chr2L 15013256 15013303 17 153 4.5 4.5 4.5 3.1 200 chr2L 15013103 intergenic CR43856 - chr2L 15013203 intergenic not near genes chr2L 15013303 intergenic not near genes chr2L_17_15010001 chr2L_15010001 RAL-850 532 chr2L 15044672 15044733 chr2L 15044798 15044859 30 126 9.5 4.5 7.0 3.8 187 chr2L 15044672 intergenic ck - chr2L 15044766 intergenic ck - chr2L 15044859 intergenic ck - chr2L_30_15040001 chr2L_15040001 RAL-850 533 chr2L 15072294 15072320 chr2L 15072435 15072437 9 137 13.5 13.5 13.5 0.6 143 chr2L 15072294 intron vas + chr2L 15072366 exon vas + chr2L 15072437 exon vas + chr2L_9_15070001 chr2L_15070001 RAL-850 534 chr2L 15077840 15078090 chr2L 15077978 15078226 45 135 4.0 4.0 4.0 9.0 386 chr2L 15077840 intron CG15270 + chr2L 15078033 intron CG15270 + chr2L 15078226 intron CG15270 + chr2L_45_15075001 chr2L_15075001 RAL-850 535 chr2L 15098489 15098506 chr2L 15098619 15098622 5 127 15.5 4.0 9.8 0.5 133 chr2L 15098489 intergenic not near genes chr2L 15098556 intergenic not near genes chr2L 15098622 intergenic not near genes chr2L_5_15095001 chr2L_15095001 RAL-850 536 chr2L 15098510 15098542 chr2L 15098618 15098672 14 126 11.5 4.5 8.0 1.6 162 chr2L 15098510 intergenic not near genes chr2L 15098591 intergenic not near genes chr2L 15098672 intergenic not near genes chr2L_14_15095001 chr2L_15095001 RAL-850 537 chr2L 15099904 15099938 chr2L 15100041 15100086 6 144 11.0 0.0 5.5 0.9 182 chr2L 15099904 intergenic not near genes chr2L 15099995 intergenic not near genes chr2L 15100086 intergenic not near genes chr2L_6_15095001 chr2L_15095001 RAL-850 538 chr2L 15138724 15138799 chr2L 15138857 15138936 24 131 0.0 3.0 1.5 9.6 212 chr2L 15138724 intergenic not near genes chr2L 15138830 intergenic not near genes chr2L 15138936 intergenic not near genes chr2L_24_15135001 chr2L_15135001 RAL-850 539 chr2L 15226335 15226393 chr2L 15226458 15226519 24 119 6.5 2.0 4.2 4.6 184 chr2L 15226335 intergenic not near genes chr2L 15226427 intergenic not near genes chr2L 15226519 intergenic not near genes chr2L_24_15225001 chr2L_15225001 RAL-850 540 chr2L 15245400 15245460 chr2L 15245512 15245575 13 122 10.0 12.5 11.2 1.1 175 chr2L 15245400 intron ZnT35C - chr2L 15245488 intron ZnT35C - chr2L 15245575 intron ZnT35C - chr2L_13_15245001 chr2L_15245001 RAL-850 541 chr2L 15315035 15315077 chr2L 15315185 15315227 11 150 5.5 13.0 9.2 1.1 192 chr2L 15315035 intergenic not near genes chr2L 15315131 intergenic not near genes chr2L 15315227 intergenic not near genes chr2L_11_15315001 chr2L_15315001 RAL-850 542 chr2L 15394122 15394148 chr2L 15394262 15394288 9 140 16.5 0.0 8.2 1.0 166 chr2L 15394122 intergenic not near genes chr2L 15394205 intergenic not near genes chr2L 15394288 intergenic not near genes chr2L_9_15390001 chr2L_15390001 RAL-850 543 chr2L 15403197 15403270 chr2L 15403325 15403399 13 128 6.5 0.0 3.2 3.1 202 chr2L 15403197 intergenic not near genes chr2L 15403298 intergenic not near genes chr2L 15403399 intergenic not near genes chr2L_13_15400001 chr2L_15400001 RAL-850 544 chr2L 15446006 15446074 chr2L 15453525 15453593 blood 24 7517 9.5 1.5 5.5 3.7 7587 chr2L 15446006 intergenic not near genes chr2L 15449800 intergenic not near genes chr2L 15453593 intergenic not near genes chr2L_24_15445001 chr2L_15445001 RAL-850 545 chr2L 15458228 15458277 chr2L 15458366 15458415 16 138 1.0 7.5 4.2 3.1 187 chr2L 15458228 intergenic not near genes chr2L 15458322 intergenic not near genes chr2L 15458415 intergenic not near genes chr2L_16_15455001 chr2L_15455001 RAL-850 546 chr2L 15512435 15512455 chr2L 15512824 15512832 8 386 15.0 3.5 9.2 0.8 397 chr2L 15512435 intergenic not near genes chr2L 15512634 intergenic not near genes chr2L 15512832 intergenic not near genes chr2L_8_15510001 chr2L_15510001 RAL-850 547 chr2L 15512458 15512510 chr2L 15512822 15512872 12 374 6.5 3.5 5.0 2.0 414 chr2L 15512458 intergenic not near genes chr2L 15512665 intergenic not near genes chr2L 15512872 intergenic not near genes chr2L_12_15510001 chr2L_15510001 RAL-850 548 chr2L 15514278 15514326 chr2L 15514412 15514460 22 133 16.5 15.0 15.8 1.3 182 chr2L 15514278 intergenic not near genes chr2L 15514369 intergenic not near genes chr2L 15514460 intergenic not near genes chr2L_22_15510001 chr2L_15510001 RAL-850 549 chr2L 15578368 15578425 chr2L 15578703 15578760 22 333 4.0 6.5 5.2 3.5 392 chr2L 15578368 intron kek3 + chr2L 15578564 intron kek3 + chr2L 15578760 intron kek3 + chr2L_22_15575001 chr2L_15575001 RAL-850 550 chr2L 15586362 15586435 chr2L 15593464 15593535 297 16 7100 5.5 4.5 5.0 2.7 7173 chr2L 15586362 intergenic not near genes chr2L 15589948 intergenic not near genes chr2L 15593535 intergenic not near genes chr2L_16_15585001 chr2L_15585001 RAL-850 551 chr2L 15598744 15598799 chr2L 15598873 15598928 14 127 3.5 0.0 1.8 5.0 184 chr2L 15598744 intergenic not near genes chr2L 15598836 intergenic not near genes chr2L 15598928 intergenic not near genes chr2L_14_15595001 chr2L_15595001 RAL-850 552 chr2L 15732465 15732541 chr2L 15732610 15732688 20 145 5.5 6.5 6.0 2.9 223 chr2L 15732465 intron CycE - chr2L 15732576 intron CycE - chr2L 15732688 intron CycE - chr2L_20_15730001 chr2L_15730001 RAL-850 553 chr2L 15749978 15750268 chr2L 15750141 15750402 11 152 0.0 0.0 0.0 11.0 424 chr2L 15749978 intron l(2)35Di - chr2L 15750190 intron l(2)35Di - chr2L 15750402 intron l(2)35Di - chr2L_11_15750001 chr2L_15750001 RAL-850 554 chr2L 15823305 15823371 chr2L 15823431 15823497 22 126 5.5 6.0 5.8 3.2 192 chr2L 15823305 intergenic CR44601 - chr2L 15823401 intergenic CR44601 - chr2L 15823497 intergenic not near genes chr2L_22_15820001 chr2L_15820001 RAL-850 555 chr2L 15826847 15826893 chr2L 15829291 15829334 Tabor 12 2442 2.5 10.0 6.2 1.7 2487 chr2L 15826847 intergenic not near genes chr2L 15828090 intergenic not near genes chr2L 15829334 intergenic not near genes chr2L_12_15825001 chr2L_15825001 RAL-850 556 chr2L 15871240 15871302 chr2L 15871373 15871435 29 133 9.0 2.0 5.5 4.5 195 chr2L 15871240 intergenic not near genes chr2L 15871338 intergenic not near genes chr2L 15871435 intergenic not near genes chr2L_29_15870001 chr2L_15870001 RAL-850 557 chr2L 15933528 15933542 chr2L 15936116 15936128 9 2588 52.0 24.5 38.2 0.2 2600 chr2L 15933528 intron beat-Ib - chr2L 15934828 intron beat-Ib - chr2L 15936128 intron beat-Ib - chr2L_9_15930001 chr2L_15930001 RAL-850 558 chr2L 15933544 15933598 chr2L 15936111 15936186 21 2584 39.0 24.5 31.8 0.6 2642 chr2L 15933544 intron beat-Ib - chr2L 15934865 intron beat-Ib - chr2L 15936186 intron beat-Ib - chr2L_21_15930001 chr2L_15930001 RAL-850 559 chr2L 15933219 15933294 chr2L 15936074 15936149 37 2855 56.5 26.5 41.5 0.9 2930 chr2L 15933219 intron beat-Ib - chr2L 15934684 intron beat-Ib - chr2L 15936149 intron beat-Ib - chr2L_37_15930001 chr2L_15930001 RAL-850 560 chr2L 15955981 15956045 chr2L 15957498 15957562 hobo 24 1516 8.5 12.0 10.2 2.1 1581 chr2L 15955981 intron beat-Ib - chr2L 15956772 intron beat-Ib - chr2L 15957562 intron beat-Ib - chr2L_24_15955001 chr2L_15955001 RAL-850 561 chr2L 16008671 16008712 chr2L 16008799 16008840 9 128 7.0 10.5 8.8 0.9 169 chr2L 16008671 intron beat-Ic + chr2L 16008756 intron beat-Ic + chr2L 16008840 intron beat-Ic + chr2L_9_16005001 chr2L_16005001 RAL-850 562 chr2L 16058077 16058145 chr2L 16058268 16058336 31 191 7.0 7.0 7.0 3.9 259 chr2L 16058077 intron beat-Ia + chr2L 16058206 intron beat-Ia + chr2L 16058336 intron beat-Ia + chr2L_31_16055001 chr2L_16055001 RAL-850 563 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 23 145889 33.5 33.5 33.5 0.7 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_23_16140001 chr2L_16140001 RAL-850 564 chr2L 16115483 16115537 chr2L 16115609 16115663 18 126 6.0 10.5 8.2 2.0 180 chr2L 16115483 intergenic not near genes chr2L 16115573 intergenic not near genes chr2L 16115663 intergenic not near genes chr2L_18_16115001 chr2L_16115001 RAL-850 565 chr2L 16141140 16141186 chr2L 16146377 16146443 copia 18 5256 9.0 11.5 10.2 1.6 5303 chr2L 16141140 intergenic not near genes chr2L 16143792 intergenic not near genes chr2L 16146443 intergenic not near genes chr2L_18_16140001 chr2L_16140001 RAL-850 566 chr2L 16153692 16153749 chr2L 16160810 16160867 297 25 7117 7.5 8.0 7.8 2.8 7175 chr2L 16153692 intergenic not near genes chr2L 16157280 intergenic not near genes chr2L 16160867 intergenic not near genes chr2L_25_16155001 chr2L_16155001 RAL-850 567 chr2L 9084336 9084340 chr2L 16217660 16217660 9 7133321 30.0 33.5 31.8 0.3 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_9_12650001 chr2L_12650001 RAL-850 568 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 25 145889 33.5 33.5 33.5 0.7 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_25_16140001 chr2L_16140001 RAL-850 569 chr2L 16280236 16280284 chr2L 16281437 16281465 1360 18 1212 7.5 13.0 10.2 1.6 1229 chr2L 16280236 intron crp - chr2L 16280850 intron crp - chr2L 16281465 intron crp - chr2L_18_16280001 chr2L_16280001 RAL-850 570 chr2L 16434059 16434126 chr2L 16434191 16434258 26 131 5.5 6.0 5.8 3.8 199 chr2L 16434059 intron CG5888 - chr2L 16434158 intron CG5888 - chr2L 16434258 intron CG5888 - chr2L_26_16430001 chr2L_16430001 RAL-850 571 chr2L 16458780 16458793 chr2L 16459026 16459039 7 246 16.0 4.0 10.0 0.6 259 chr2L 16458780 intergenic not near genes chr2L 16458910 intergenic not near genes chr2L 16459039 intergenic not near genes chr2L_7_16455001 chr2L_16455001 RAL-850 572 chr2L 16482070 16482082 chr2L 16482209 16482221 5 139 2.0 0.0 1.0 2.5 151 chr2L 16482070 intron dac - chr2L 16482146 intron dac - chr2L 16482221 intron dac - chr2L_5_16480001 chr2L_16480001 RAL-850 573 chr2L 16507894 16507967 chr2L 16508027 16508105 12 136 0.0 8.0 4.0 2.4 211 chr2L 16507894 intergenic CG5953 -,Tpr2 + chr2L 16508000 intergenic CG5953 -,Tpr2 + chr2L 16508105 3` UTR CG5953 - chr2L_12_16505001 chr2L_16505001 RAL-850 574 chr2L 16511935 16511994 chr2L 16519112 16519171 HMS-Beagle 23 7177 7.5 5.5 6.5 3.1 7236 chr2L 16511935 intron CG5953 - chr2L 16515553 intron CG5953 - chr2L 16519171 intron CG5953 - chr2L_23_16515001 chr2L_16515001 RAL-850 575 chr2L 16570812 16570867 chr2L 16570938 16570993 16 126 0.5 6.5 3.5 3.6 181 chr2L 16570812 intron CG42389 + chr2L 16570902 intron CG42389 + chr2L 16570993 intron CG42389 + chr2L_16_16570001 chr2L_16570001 RAL-850 576 chr2L 16583063 16583086 chr2L 16583201 16583224 8 138 13.0 10.0 11.5 0.6 161 chr2L 16583063 intron CG42389 + chr2L 16583144 intron CG42389 + chr2L 16583224 intron CG42389 + chr2L_8_16580001 chr2L_16580001 RAL-850 577 chr2L 16583087 16583127 chr2L 16583225 16583265 10 138 4.5 14.0 9.2 1.0 178 chr2L 16583087 intron CG42389 + chr2L 16583176 intron CG42389 + chr2L 16583265 intron CG42389 + chr2L_10_16580001 chr2L_16580001 RAL-850 578 chr2L 16583510 16583570 chr2L 16583694 16583754 12 183 4.0 5.0 4.5 2.2 244 chr2L 16583510 intron CG42389 + chr2L 16583632 intron CG42389 + chr2L 16583754 intron CG42389 + chr2L_12_16580001 chr2L_16580001 RAL-850 579 chr2L 16593978 16594146 chr2L 16594104 16594286 25 132 0.0 1.5 0.8 13.9 308 chr2L 16593978 intron CG42389 + chr2L 16594132 intron CG42389 + chr2L 16594286 intron CG42389 + chr2L_25_16590001 chr2L_16590001 RAL-850 580 chr2L 16629478 16629520 chr2L 16629630 16629675 15 153 18.5 0.0 9.2 1.5 197 chr2L 16629478 intron CG42389 + chr2L 16629576 intron CG42389 + chr2L 16629675 intron CG42389 + chr2L_15_16625001 chr2L_16625001 RAL-850 581 chr2L 16708436 16708483 chr2L 16708575 16708622 15 138 10.5 12.0 11.2 1.2 186 chr2L 16708436 intron CG31808 - chr2L 16708529 intron CG31808 - chr2L 16708622 intron CG31808 - chr2L_15_16705001 chr2L_16705001 RAL-850 582 chr2L 16764931 16764993 chr2L 16765061 16765123 24 129 6.0 5.5 5.8 3.5 192 chr2L 16764931 intergenic not near genes chr2L 16765027 intergenic not near genes chr2L 16765123 intergenic not near genes chr2L_24_16765001 chr2L_16765001 RAL-850 583 chr2L 16939986 16940008 chr2L 16940099 16940130 6 120 12.0 15.0 13.5 0.4 144 chr2L 16939986 intergenic not near genes chr2L 16940058 intergenic not near genes chr2L 16940130 intergenic not near genes chr2L_6_16940001 chr2L_16940001 RAL-850 584 chr2L 16958066 16958126 chr2L 16962904 16962964 Doc 24 4838 7.5 10.0 8.8 2.4 4898 chr2L 16958066 intergenic not near genes chr2L 16960515 intergenic not near genes chr2L 16962964 intergenic not near genes chr2L_24_16960001 chr2L_16960001 RAL-850 585 chr2L 16991436 16991508 chr2L 16991592 16991664 17 155 3.5 5.0 4.2 3.3 228 chr2L 16991436 intron beat-IIIb + chr2L 16991550 intron beat-IIIb + chr2L 16991664 intron beat-IIIb + chr2L_17_16990001 chr2L_16990001 RAL-850 586 chr2L 17050017 17050047 chr2L 17050119 17050146 7 113 2.0 7.5 4.8 1.2 129 chr2L 17050017 intergenic not near genes chr2L 17050082 intergenic not near genes chr2L 17050146 intergenic not near genes chr2L_7_17050001 chr2L_17050001 RAL-850 587 chr2L 17052368 17052442 chr2L 17052530 17052604 16 162 3.0 6.5 4.8 2.8 236 chr2L 17052368 intergenic not near genes chr2L 17052486 intergenic not near genes chr2L 17052604 intergenic not near genes chr2L_16_17050001 chr2L_17050001 RAL-850 588 chr2L 17052597 17052624 chr2L 17053028 17053055 8 431 9.0 12.5 10.8 0.7 458 chr2L 17052597 intergenic not near genes chr2L 17052826 intergenic not near genes chr2L 17053055 intergenic not near genes chr2L_8_17050001 chr2L_17050001 RAL-850 589 chr2L 17052625 17052667 chr2L 17053025 17053075 16 425 4.5 12.0 8.2 1.7 450 chr2L 17052625 intergenic not near genes chr2L 17052850 intergenic not near genes chr2L 17053075 intergenic not near genes chr2L_16_17050001 chr2L_17050001 RAL-850 590 chr2L 17062711 17062757 chr2L 17062843 17062888 10 132 10.0 7.5 8.8 1.0 177 chr2L 17062711 intergenic not near genes chr2L 17062800 intergenic not near genes chr2L 17062888 intergenic not near genes chr2L_10_17060001 chr2L_17060001 RAL-850 591 chr2L 17069244 17069321 chr2L 17069564 17069636 31 313 5.0 10.0 7.5 3.6 392 chr2L 17069244 intergenic not near genes chr2L 17069440 intergenic not near genes chr2L 17069636 intergenic not near genes chr2L_31_17065001 chr2L_17065001 RAL-850 592 chr2L 17070160 17070202 chr2L 17070306 17070338 11 145 8.0 0.0 4.0 2.2 178 chr2L 17070160 intergenic not near genes chr2L 17070249 intergenic not near genes chr2L 17070338 intergenic not near genes chr2L_11_17070001 chr2L_17070001 RAL-850 593 chr2L 17084234 17084306 chr2L 17084370 17084442 22 134 8.5 0.0 4.2 4.2 208 chr2L 17084234 intergenic not near genes chr2L 17084338 intergenic not near genes chr2L 17084442 intergenic not near genes chr2L_22_17080001 chr2L_17080001 RAL-850 594 chr2L 17091482 17091539 chr2L 17091643 17091716 15 156 5.5 6.5 6.0 2.1 234 chr2L 17091482 intergenic not near genes chr2L 17091599 intergenic not near genes chr2L 17091716 intergenic not near genes chr2L_15_17090001 chr2L_17090001 RAL-850 595 chr2L 17101850 17101914 chr2L 17101977 17102041 20 127 8.0 10.5 9.2 2.0 191 chr2L 17101850 intergenic not near genes chr2L 17101946 intergenic not near genes chr2L 17102041 intergenic not near genes chr2L_20_17100001 chr2L_17100001 RAL-850 596 chr2L 17102969 17103019 chr2L 17103107 17103157 15 138 8.5 8.5 8.5 1.6 188 chr2L 17102969 intergenic not near genes chr2L 17103063 intergenic not near genes chr2L 17103157 intergenic not near genes chr2L_15_17100001 chr2L_17100001 RAL-850 597 chr2L 17167520 17167589 chr2L 17167811 17167880 pogo 24 291 11.5 11.0 11.2 2.0 360 chr2L 17167520 intron,intron CG34106 +,beat-IIIa + chr2L 17167700 intron,intron CG34106 +,beat-IIIa + chr2L 17167880 intron,intron CG34106 +,beat-IIIa + chr2L_24_17165001 chr2L_17165001 RAL-850 598 chr2L 17199120 17199179 chr2L 17200637 17200696 hobo 15 1516 10.0 3.0 6.5 2.0 1576 chr2L 17199120 intron beat-IIIc - chr2L 17199908 intron beat-IIIc - chr2L 17200696 intron beat-IIIc - chr2L_15_17195001 chr2L_17195001 RAL-850 599 chr2L 17238790 17238862 chr2L 17238925 17238997 31 133 3.0 8.0 5.5 4.8 207 chr2L 17238790 intron beat-IIIc - chr2L 17238894 intron beat-IIIc - chr2L 17238997 intron beat-IIIc - chr2L_31_17235001 chr2L_17235001 RAL-850 600 chr2L 17240522 17240591 chr2L 17240659 17240716 22 136 6.0 10.5 8.2 2.4 194 chr2L 17240522 intron beat-IIIc - chr2L 17240619 intron beat-IIIc - chr2L 17240716 intron beat-IIIc - chr2L_22_17240001 chr2L_17240001 RAL-850 601 chr2L 17243904 17243937 chr2L 17244162 17244195 12 258 10.0 9.0 9.5 1.1 291 chr2L 17243904 intron beat-IIIc - chr2L 17244050 intron beat-IIIc - chr2L 17244195 intron beat-IIIc - chr2L_12_17240001 chr2L_17240001 RAL-850 602 chr2L 17273152 17273213 chr2L 17277985 17278046 F-element 26 4828 6.0 7.0 6.5 3.5 4894 chr2L 17273152 intergenic not near genes chr2L 17275599 intergenic not near genes chr2L 17278046 intergenic not near genes chr2L_26_17275001 chr2L_17275001 RAL-850 603 chr2L 17309898 17309968 chr2L 17310023 17310099 24 130 6.5 3.5 5.0 4.0 201 chr2L 17309898 intergenic not near genes chr2L 17309998 intergenic not near genes chr2L 17310099 intergenic not near genes chr2L_24_17305001 chr2L_17305001 RAL-850 604 chr2L 17327873 17327927 chr2L 17328009 17328063 28 135 12.0 11.5 11.8 2.2 190 chr2L 17327873 intergenic not near genes chr2L 17327968 intergenic not near genes chr2L 17328063 intergenic not near genes chr2L_28_17325001 chr2L_17325001 RAL-850 605 chr2L 17344829 17344902 chr2L 17344956 17345029 23 127 9.5 7.0 8.2 2.5 200 chr2L 17344829 intergenic not near genes chr2L 17344929 intergenic not near genes chr2L 17345029 intergenic not near genes chr2L_23_17340001 chr2L_17340001 RAL-850 606 chr2L 17379663 17379706 chr2L 17379798 17379841 12 135 4.5 2.0 3.2 2.9 178 chr2L 17379663 intron Lrch - chr2L 17379752 intron Lrch - chr2L 17379841 intron Lrch - chr2L_12_17375001 chr2L_17375001 RAL-850 607 chr2L 17425719 17425790 chr2L 17425896 17425967 25 177 5.0 4.5 4.8 4.3 248 chr2L 17425719 intron Dif - chr2L 17425843 intron Dif - chr2L 17425967 intron Dif - chr2L_25_17425001 chr2L_17425001 RAL-850 608 chr2L 17432026 17432046 chr2L 17432183 17432203 1360 9 157 0.0 14.0 7.0 1.1 177 chr2L 17432026 intron Dif - chr2L 17432114 intron Dif - chr2L 17432203 intron Dif - chr2L_9_17430001 chr2L_17430001 RAL-850 609 chr2L 17571148 17571161 chr2L 17571281 17571294 8 133 0.0 19.5 9.8 0.7 146 chr2L 17571148 intergenic not near genes chr2L 17571221 intergenic not near genes chr2L 17571294 intergenic not near genes chr2L_8_17570001 chr2L_17570001 RAL-850 610 chr2L 17577688 17577738 chr2L 17577814 17577864 15 126 10.0 12.5 11.2 1.2 176 chr2L 17577688 intergenic not near genes chr2L 17577776 intergenic not near genes chr2L 17577864 intergenic not near genes chr2L_15_17575001 chr2L_17575001 RAL-850 611 chr2L 17595421 17595478 chr2L 17595583 17595640 25 162 5.0 5.5 5.2 4.0 219 chr2L 17595421 intron Sytalpha + chr2L 17595530 intron Sytalpha + chr2L 17595640 intron Sytalpha + chr2L_25_17595001 chr2L_17595001 RAL-850 612 chr2L 17607439 17607476 chr2L 17607587 17607624 8 148 15.0 0.0 7.5 0.9 185 chr2L 17607439 intergenic CR44412 - chr2L 17607532 intergenic CR44412 - chr2L 17607624 intergenic CR44412 - chr2L_8_17605001 chr2L_17605001 RAL-850 613 chr2L 17687467 17687520 chr2L 17692262 17692315 F-element 27 4794 6.0 8.5 7.2 3.3 4848 chr2L 17687467 intron CadN - chr2L 17689891 intron CadN - chr2L 17692315 intron CadN - chr2L_27_17685001 chr2L_17685001 RAL-850 614 chr2L 17723744 17723800 chr2L 17723887 17723922 21 142 6.0 5.5 5.8 3.1 178 chr2L 17723744 intron CadN - chr2L 17723833 intron CadN - chr2L 17723922 intron CadN - chr2L_21_17720001 chr2L_17720001 RAL-850 615 chr2L 17727822 17727867 chr2L 17729339 17729384 hobo 18 1514 7.5 12.5 10.0 1.6 1562 chr2L 17727822 intron CadN - chr2L 17728603 intron CadN - chr2L 17729384 intron CadN - chr2L_18_17725001 chr2L_17725001 RAL-850 616 chr2L 17747951 17747969 chr2L 17748078 17748096 5 127 18.5 7.0 12.8 0.4 145 chr2L 17747951 intron CadN - chr2L 17748024 intron CadN - chr2L 17748096 intron CadN - chr2L_5_17745001 chr2L_17745001 RAL-850 617 chr2L 17747973 17748023 chr2L 17748075 17748150 23 122 8.0 8.5 8.2 2.5 177 chr2L 17747973 intron CadN - chr2L 17748062 intron CadN - chr2L 17748150 intron CadN - chr2L_23_17745001 chr2L_17745001 RAL-850 618 chr2L 17819882 17819944 chr2L 17825130 17825197 copia 25 5252 10.5 8.5 9.5 2.4 5315 chr2L 17819882 intron CadN2 - chr2L 17822540 intron CadN2 - chr2L 17825197 intron CadN2 - chr2L_25_17820001 chr2L_17820001 RAL-850 619 chr2L 17867381 17867452 chr2L 17867717 17867788 40 334 7.0 7.5 7.2 4.9 407 chr2L 17867381 intron CadN2 - chr2L 17867584 intron CadN2 - chr2L 17867788 intron CadN2 - chr2L_40_17865001 chr2L_17865001 RAL-850 620 chr2L 17879976 17880017 chr2L 17880113 17880129 18 134 8.5 7.0 7.8 2.0 153 chr2L 17879976 intergenic not near genes chr2L 17880052 intergenic not near genes chr2L 17880129 intergenic not near genes chr2L_18_17880001 chr2L_17880001 RAL-850 621 chr2L 17911919 17911983 chr2L 17914147 17914211 pogo 18 2227 9.5 9.5 9.5 1.7 2292 chr2L 17911919 intergenic not near genes chr2L 17913065 intergenic not near genes chr2L 17914211 intergenic CG43271 - chr2L_18_17910001 chr2L_17910001 RAL-850 622 chr2L 17944374 17944449 chr2L 17944587 17944633 28 211 9.5 10.5 10.0 2.5 259 chr2L 17944374 intergenic not near genes chr2L 17944504 intergenic not near genes chr2L 17944633 intergenic not near genes chr2L_28_17940001 chr2L_17940001 RAL-850 623 chr2L 17951901 17951978 chr2L 17953411 17953472 hobo 23 1516 5.5 8.5 7.0 2.9 1571 chr2L 17951901 intergenic CR44398 -,CR44397 - chr2L 17952686 intergenic not near genes chr2L 17953472 intergenic not near genes chr2L_23_17950001 chr2L_17950001 RAL-850 624 chr2L 18043725 18043751 chr2L 18043908 18043926 12 182 7.5 15.5 11.5 1.0 201 chr2L 18043725 intron rdo + chr2L 18043826 intron rdo + chr2L 18043926 intron rdo + chr2L_12_18040001 chr2L_18040001 RAL-850 625 chr2L 18051831 18051898 chr2L 18061028 18061083 roo 24 9191 9.5 9.0 9.2 2.4 9252 chr2L 18051831 intron rdo + chr2L 18056457 intron rdo + chr2L 18061083 intron rdo + chr2L_24_18055001 chr2L_18055001 RAL-850 626 chr2L 18079769 18079837 chr2L 18079905 18079973 26 135 10.5 7.5 9.0 2.6 204 chr2L 18079769 intron Arr1 + chr2L 18079871 intron Arr1 + chr2L 18079973 exon Arr1 + chr2L_26_18075001 chr2L_18075001 RAL-850 627 chr2L 18111194 18111224 chr2L 18111335 18111344 11 139 23.0 16.5 19.8 0.5 150 chr2L 18111194 intergenic not near genes chr2L 18111269 intergenic not near genes chr2L 18111344 intergenic not near genes chr2L_11_18110001 chr2L_18110001 RAL-850 628 chr2L 18231100 18231117 chr2L 18231235 18231247 7 134 15.5 14.5 15.0 0.4 147 chr2L 18231100 intron CG42750 - chr2L 18231174 intron CG42750 - chr2L 18231247 intron CG42750 - chr2L_7_18230001 chr2L_18230001 RAL-850 629 chr2L 18231121 18231160 chr2L 18231232 18231245 4 98 9.0 14.0 11.5 0.3 124 chr2L 18231121 intron CG42750 - chr2L 18231183 intron CG42750 - chr2L 18231245 intron CG42750 - chr2L_4_18230001 chr2L_18230001 RAL-850 630 chr2L 18250522 18250535 chr2L 18250684 18250697 5 162 15.5 7.5 11.5 0.4 175 chr2L 18250522 intron CG42750 - chr2L 18250610 intron CG42750 - chr2L 18250697 intron CG42750 - chr2L_5_18250001 chr2L_18250001 RAL-850 631 chr2L 18307853 18307917 chr2L 18307980 18308044 25 126 7.5 7.0 7.2 3.0 191 chr2L 18307853 intergenic CR43353 - chr2L 18307948 intergenic CR43353 - chr2L 18308044 intergenic CR43353 - chr2L_25_18305001 chr2L_18305001 RAL-850 632 chr2L 18406366 18406384 chr2L 18406494 18406516 9 137 11.0 6.5 8.8 0.9 150 chr2L 18406366 intergenic not near genes chr2L 18406441 intergenic not near genes chr2L 18406516 intergenic not near genes chr2L_9_18405001 chr2L_18405001 RAL-850 633 chr2L 18406393 18406431 chr2L 18406493 18406546 14 132 4.0 6.0 5.0 2.3 153 chr2L 18406393 intergenic not near genes chr2L 18406470 intergenic not near genes chr2L 18406546 intergenic not near genes chr2L_14_18405001 chr2L_18405001 RAL-850 634 chr2L 18407984 18408051 chr2L 18412818 18412893 Doc 10 4834 8.5 0.5 4.5 1.8 4909 chr2L 18407984 intergenic not near genes chr2L 18410438 intergenic not near genes chr2L 18412893 intergenic not near genes chr2L_10_18410001 chr2L_18410001 RAL-850 635 chr2L 18419736 18419804 chr2L 18419873 18419906 8 130 5.0 4.0 4.5 1.5 170 chr2L 18419736 intergenic not near genes chr2L 18419821 intergenic not near genes chr2L 18419906 intergenic not near genes chr2L_8_18415001 chr2L_18415001 RAL-850 636 chr2L 18441110 18441169 chr2L 18441300 18441357 18 188 3.0 7.5 5.2 2.9 247 chr2L 18441110 intergenic RpS26 - chr2L 18441234 intergenic RpS26 - chr2L 18441357 3` UTR RpS26 - chr2L_18_18440001 chr2L_18440001 RAL-850 637 chr2L 18443295 18443365 chr2L 18443428 18443500 18 135 7.0 5.0 6.0 2.6 205 chr2L 18443295 intergenic RpS26 - chr2L 18443398 intergenic RpS26 - chr2L 18443500 intergenic RpS26 - chr2L_18_18440001 chr2L_18440001 RAL-850 638 chr2L 18443569 18443632 chr2L 18443738 18443799 10 167 2.5 4.0 3.2 2.4 230 chr2L 18443569 intergenic RpS26 - chr2L 18443684 intergenic RpS26 - chr2L 18443799 intergenic not near genes chr2L_10_18440001 chr2L_18440001 RAL-850 639 chr2L 18449341 18449408 chr2L 18449492 18449559 19 150 4.5 6.0 5.2 3.1 218 chr2L 18449341 intergenic bsf -,ncm - chr2L 18449450 intergenic bsf -,ncm - chr2L 18449559 3` UTR bsf - chr2L_19_18445001 chr2L_18445001 RAL-850 640 chr2L 18496690 18496714 chr2L 18496821 18496846 8 132 0.0 10.0 5.0 1.3 156 chr2L 18496690 intron kon - chr2L 18496768 intron kon - chr2L 18496846 intron kon - chr2L_8_18495001 chr2L_18495001 RAL-850 641 chr2L 18575579 18575591 chr2L 18575726 18575738 7 147 11.0 0.0 5.5 1.1 159 chr2L 18575579 intron Pde11 - chr2L 18575658 intron Pde11 - chr2L 18575738 intron Pde11 - chr2L_7_18575001 chr2L_18575001 RAL-850 642 chr2L 18584695 18584770 chr2L 18584832 18584905 11 135 8.5 8.0 8.2 1.2 210 chr2L 18584695 intron Pde11 - chr2L 18584800 intron Pde11 - chr2L 18584905 intron Pde11 - chr2L_11_18580001 chr2L_18580001 RAL-850 643 chr2L 18762333 18762366 chr2L 18762437 18762508 25 136 10.0 9.0 9.5 2.4 175 chr2L 18762333 intergenic not near genes chr2L 18762420 intergenic ham - chr2L 18762508 intergenic ham - chr2L_25_18760001 chr2L_18760001 RAL-850 644 chr2L 18791022 18791091 chr2L 18791151 18791220 28 128 12.0 12.0 12.0 2.2 198 chr2L 18791022 intron ham - chr2L 18791121 intron ham - chr2L 18791220 intron ham - chr2L_28_18790001 chr2L_18790001 RAL-850 645 chr2L 18811389 18811431 chr2L 18811521 18811563 13 132 6.5 5.0 5.8 1.9 174 chr2L 18811389 intergenic CG10570 -,CG42502 - chr2L 18811476 intergenic CG10570 -,CG42502 - chr2L 18811563 intergenic not near genes chr2L_13_18810001 chr2L_18810001 RAL-850 646 chr2L 18816704 18816764 chr2L 18816886 18816946 40 181 7.0 16.5 11.8 3.1 242 chr2L 18816704 intergenic not near genes chr2L 18816825 intergenic not near genes chr2L 18816946 intergenic not near genes chr2L_40_18815001 chr2L_18815001 RAL-850 647 chr2L 18872913 18872944 chr2L 18873036 18873080 12 133 19.0 8.5 13.8 0.8 167 chr2L 18872913 intron tup - chr2L 18872996 intron tup - chr2L 18873080 intron tup - chr2L_12_18870001 chr2L_18870001 RAL-850 648 chr2L 18872948 18872977 chr2L 18873033 18873096 9 128 9.5 8.5 9.0 0.9 148 chr2L 18872948 intron tup - chr2L 18873022 intron tup - chr2L 18873096 intron tup - chr2L_9_18870001 chr2L_18870001 RAL-850 649 chr2L 18876814 18876884 chr2L 18876942 18877012 33 128 6.0 7.5 6.8 4.2 198 chr2L 18876814 intron tup - chr2L 18876913 intron tup - chr2L 18877012 intron tup - chr2L_33_18875001 chr2L_18875001 RAL-850 650 chr2L 18898359 18898415 chr2L 18898482 18898531 23 127 10.0 4.5 7.2 2.8 172 chr2L 18898359 intergenic not near genes chr2L 18898445 intergenic not near genes chr2L 18898531 intergenic not near genes chr2L_23_18895001 chr2L_18895001 RAL-850 651 chr2L 18902577 18902649 chr2L 18902908 18902980 22 331 5.5 3.5 4.5 4.0 403 chr2L 18902577 intergenic not near genes chr2L 18902778 intergenic not near genes chr2L 18902980 intergenic not near genes chr2L_22_18900001 chr2L_18900001 RAL-850 652 chr2L 18955255 18955261 chr2L 18955428 18955434 4 173 0.0 8.0 4.0 0.8 179 chr2L 18955255 intergenic CG10623 -,CR44741 + chr2L 18955344 intergenic CG10623 -,CR44741 + chr2L 18955434 intergenic CG10623 -,CR44741 + chr2L_4_18955001 chr2L_18955001 RAL-850 653 chr2L 19075820 19076035 chr2L 19075983 19076176 45 155 6.0 6.0 6.0 6.4 356 chr2L 19075820 intergenic not near genes chr2L 19075998 intergenic not near genes chr2L 19076176 intergenic not near genes chr2L_45_19075001 chr2L_19075001 RAL-850 654 chr2L 19142437 19142505 chr2L 19142577 19142645 30 137 7.0 6.5 6.8 3.8 208 chr2L 19142437 intron brat + chr2L 19142541 intron brat + chr2L 19142645 intron brat + chr2L_30_19140001 chr2L_19140001 RAL-850 655 chr2L 19147258 19147281 chr2L 19154405 19154428 297 6 7146 10.0 6.0 8.0 0.7 7170 chr2L 19147258 intron brat + chr2L 19150843 intron brat + chr2L 19154428 intron brat + chr2L_6_19150001 chr2L_19150001 RAL-850 656 chr2L 19147285 19147392 chr2L 19154404 19154477 297 9 7109 0.0 5.5 2.8 2.4 7192 chr2L 19147285 intron brat + chr2L 19150881 intron brat + chr2L 19154477 intron brat + chr2L_9_19150001 chr2L_19150001 RAL-850 657 chr2L 19189940 19189985 chr2L 19190144 19190189 19 204 6.5 13.5 10.0 1.7 249 chr2L 19189940 intergenic pigeon +,drl + chr2L 19190064 intergenic pigeon +,drl + chr2L 19190189 intergenic drl +,pigeon + chr2L_19_19190001 chr2L_19190001 RAL-850 658 chr2L 19237258 19237280 chr2L 19237408 19237430 12 148 22.5 6.0 14.2 0.8 172 chr2L 19237258 intergenic not near genes chr2L 19237344 intergenic not near genes chr2L 19237430 intergenic not near genes chr2L_12_19235001 chr2L_19235001 RAL-850 659 chr2L 19237284 19237331 chr2L 19237406 19237481 23 142 12.0 5.5 8.8 2.3 197 chr2L 19237284 intergenic not near genes chr2L 19237382 intergenic not near genes chr2L 19237481 intergenic not near genes chr2L_23_19235001 chr2L_19235001 RAL-850 660 chr2L 19344968 19345035 chr2L 19357227 19357294 blood 14 12258 9.5 10.0 9.8 1.3 12326 chr2L 19344968 intron dnt - chr2L 19351131 intron dnt - chr2L 19357294 intron dnt - chr2L_14_19350001 chr2L_19350001 RAL-850 661 chr2L 19357500 19357569 chr2L 19357640 19357693 31 138 13.0 13.5 13.2 2.2 193 chr2L 19357500 intron dnt - chr2L 19357596 intron dnt - chr2L 19357693 intron dnt - chr2L_31_19355001 chr2L_19355001 RAL-850 662 chr2L 19374441 19374517 chr2L 19374600 19374676 26 156 5.5 4.5 5.0 4.3 235 chr2L 19374441 intergenic not near genes chr2L 19374558 intergenic not near genes chr2L 19374676 intergenic not near genes chr2L_26_19370001 chr2L_19370001 RAL-850 663 chr2L 19405580 19405640 chr2L 19405720 19405780 15 140 4.5 3.5 4.0 3.0 200 chr2L 19405580 intron Pax - chr2L 19405680 intron Pax - chr2L 19405780 intron Pax - chr2L_15_19405001 chr2L_19405001 RAL-850 664 chr2L 19407667 19407740 chr2L 19407914 19407987 48 247 9.0 12.5 10.8 4.1 320 chr2L 19407667 intron Pax - chr2L 19407827 intron Pax - chr2L 19407987 intron Pax - chr2L_48_19405001 chr2L_19405001 RAL-850 665 chr2L 19441021 19441087 chr2L 19441148 19441209 29 126 18.0 16.0 17.0 1.6 188 chr2L 19441021 intron CG10237 - chr2L 19441115 intron CG10237 - chr2L 19441209 5` UTR CG10237 - chr2L_29_19440001 chr2L_19440001 RAL-850 666 chr2L 19541581 19541634 chr2L 19541716 19541769 20 135 1.0 2.5 1.8 7.1 188 chr2L 19541581 intergenic CG13081 + chr2L 19541675 intergenic CG13081 + chr2L 19541769 intergenic CG13081 + chr2L_20_19540001 chr2L_19540001 RAL-850 667 chr2L 19544571 19544586 chr2L 19544678 19544713 7 113 21.5 15.5 18.5 0.4 142 chr2L 19544571 exon ref(2)P + chr2L 19544642 exon ref(2)P + chr2L 19544713 exon ref(2)P + chr2L_7_19540001 chr2L_19540001 RAL-850 668 chr2L 19544588 19544592 chr2L 19544666 19544713 8 100 19.0 17.0 18.0 0.4 125 chr2L 19544588 exon ref(2)P + chr2L 19544650 exon ref(2)P + chr2L 19544713 exon ref(2)P + chr2L_8_19540001 chr2L_19540001 RAL-850 669 chr2L 19544593 19544630 chr2L 19544665 19544682 12 102 18.0 17.0 17.5 0.6 89 chr2L 19544593 exon ref(2)P + chr2L 19544638 exon ref(2)P + chr2L 19544682 exon ref(2)P + chr2L_12_19540001 chr2L_19540001 RAL-850 670 chr2L 19557782 19557803 chr2L 19557924 19557945 10 141 6.5 1.0 3.8 2.1 163 chr2L 19557782 intergenic Tep5 + chr2L 19557864 intergenic Tep5 + chr2L 19557945 intergenic Tep5 + chr2L_10_19555001 chr2L_19555001 RAL-850 671 chr2L 19557804 19557984 chr2L 19557919 19558114 15 132 1.0 1.0 1.0 7.5 310 chr2L 19557804 intergenic Tep5 + chr2L 19557959 intergenic Tep5 + chr2L 19558114 exon Tep5 + chr2L_15_19555001 chr2L_19555001 RAL-850 672 chr2L 19558479 19558486 chr2L 19558633 19558640 5 153 7.5 10.0 8.8 0.5 161 chr2L 19558479 intron Tep5 + chr2L 19558560 intron Tep5 + chr2L 19558640 intron Tep5 + chr2L_5_19555001 chr2L_19555001 RAL-850 673 chr2L 19558489 19558544 chr2L 19558628 19558698 20 153 0.0 10.0 5.0 3.3 209 chr2L 19558489 intron Tep5 + chr2L 19558594 intron Tep5 + chr2L 19558698 intron Tep5 + chr2L_20_19555001 chr2L_19555001 RAL-850 674 chr2L 19559955 19560032 chr2L 19560258 19560334 33 302 8.0 6.5 7.2 4.0 379 chr2L 19559955 exon Tep5 + chr2L 19560144 exon Tep5 + chr2L 19560334 intron Tep5 + chr2L_33_19560001 chr2L_19560001 RAL-850 675 chr2L 19560796 19560864 chr2L 19560926 19561009 20 138 8.0 0.0 4.0 4.0 213 chr2L 19560796 exon Tep5 + chr2L 19560902 exon Tep5 + chr2L 19561009 exon Tep5 + chr2L_20_19560001 chr2L_19560001 RAL-850 676 chr2L 19561298 19561368 chr2L 19561491 19561559 35 190 5.0 8.5 6.8 4.5 261 chr2L 19561298 exon Tep5 + chr2L 19561428 exon Tep5 + chr2L 19561559 exon Tep5 + chr2L_35_19560001 chr2L_19560001 RAL-850 677 chr2L 19587745 19587819 chr2L 19587892 19587966 40 145 7.0 9.5 8.2 4.3 221 chr2L 19587745 intron Lar + chr2L 19587856 intron Lar + chr2L 19587966 intron Lar + chr2L_40_19585001 chr2L_19585001 RAL-850 678 chr2L 19601522 19601600 chr2L 19601648 19601727 21 126 8.0 7.5 7.8 2.4 205 chr2L 19601522 intron,intron Lar +,CR44978 - chr2L 19601624 intron,intron Lar +,CR44978 - chr2L 19601727 intron,intron Lar +,CR44978 - chr2L_21_19600001 chr2L_19600001 RAL-850 679 chr2L 19627272 19627317 chr2L 19627410 19627450 15 135 19.0 14.5 16.8 0.8 178 chr2L 19627272 intron Lar + chr2L 19627361 intron Lar + chr2L 19627450 intron Lar + chr2L_15_19625001 chr2L_19625001 RAL-850 680 chr2L 19652525 19652592 chr2L 19674011 19674078 opus 32 21486 12.5 11.5 12.0 2.5 21553 chr2L 19652525 intron Lar + chr2L 19663302 intron Lar + chr2L 19674078 intron Lar + chr2L_32_19660001 chr2L_19660001 RAL-850 681 chr2L 19687129 19687207 chr2L 19687291 19687352 31 157 11.5 8.0 9.8 2.9 223 chr2L 19687129 intron Lar + chr2L 19687240 intron Lar + chr2L 19687352 intron Lar + chr2L_31_19685001 chr2L_19685001 RAL-850 682 chr2L 19703497 19703561 chr2L 19712683 19712747 roo 38 9185 10.5 9.5 10.0 3.5 9250 chr2L 19703497 intron Lar + chr2L 19708122 intron Lar + chr2L 19712747 intron Lar + chr2L_38_19705001 chr2L_19705001 RAL-850 683 chr2L 19716466 19716483 chr2L 19716674 19716716 9 222 0.0 11.5 5.8 1.3 250 chr2L 19716466 intron Lar + chr2L 19716591 intron Lar + chr2L 19716716 intron Lar + chr2L_9_19715001 chr2L_19715001 RAL-850 684 chr2L 19737308 19737383 chr2L 19740827 19740902 1360 28 3510 4.5 9.0 6.8 3.6 3594 chr2L 19737308 intergenic Nf-YB + chr2L 19739105 intergenic not near genes chr2L 19740902 intergenic not near genes chr2L_28_19735001 chr2L_19735001 RAL-850 685 chr2L 19762763 19762829 chr2L 19763055 19763121 pogo 18 291 11.0 10.5 10.8 1.5 358 chr2L 19762763 exon fbp - chr2L 19762942 intron fbp - chr2L 19763121 intron fbp - chr2L_18_19760001 chr2L_19760001 RAL-850 686 chr2L 19773123 19773188 chr2L 19773260 19773325 20 137 10.0 8.5 9.2 2.0 202 chr2L 19773123 intergenic not near genes chr2L 19773224 intergenic not near genes chr2L 19773325 intergenic not near genes chr2L_20_19770001 chr2L_19770001 RAL-850 687 chr2L 19824374 19824429 chr2L 19824507 19824562 12 133 4.0 8.5 6.2 1.7 188 chr2L 19824374 intron sick + chr2L 19824468 intron sick + chr2L 19824562 intron sick + chr2L_12_19820001 chr2L_19820001 RAL-850 688 chr2L 19837233 19837309 chr2L 19837363 19837438 28 126 11.5 13.0 12.2 2.1 205 chr2L 19837233 intron sick + chr2L 19837336 intron sick + chr2L 19837438 intron sick + chr2L_28_19835001 chr2L_19835001 RAL-850 689 chr2L 19846237 19846255 chr2L 19846365 19846386 11 131 0.5 11.5 6.0 1.6 149 chr2L 19846237 intron sick + chr2L 19846312 intron sick + chr2L 19846386 intron sick + chr2L_11_19845001 chr2L_19845001 RAL-850 690 chr2L 19846262 19846271 chr2L 19846361 19846402 6 126 0.5 11.0 5.8 0.9 140 chr2L 19846262 intron sick + chr2L 19846332 intron sick + chr2L 19846402 intron sick + chr2L_6_19845001 chr2L_19845001 RAL-850 691 chr2L 19901448 19901510 chr2L 19901595 19901663 31 152 13.5 8.5 11.0 2.6 215 chr2L 19901448 intron sick + chr2L 19901556 intron sick + chr2L 19901663 intron sick + chr2L_31_19900001 chr2L_19900001 RAL-850 692 chr2L 19911246 19911259 chr2L 19911383 19911397 8 138 29.5 10.0 19.8 0.4 151 chr2L 19911246 intron,3` UTR sick +,CR43097 - chr2L 19911322 intron,3` UTR sick +,CR43097 - chr2L 19911397 intron,3` UTR sick +,CR43097 - chr2L_8_19910001 chr2L_19910001 RAL-850 693 chr2L 19911261 19911323 chr2L 19911382 19911419 34 133 8.0 10.0 9.0 3.4 158 chr2L 19911261 intron,3` UTR sick +,CR43097 - chr2L 19911340 intron,3` UTR sick +,CR43097 - chr2L 19911419 intron,3` UTR sick +,CR43097 - chr2L_34_19910001 chr2L_19910001 RAL-850 694 chr2L 19935193 19935255 chr2L 19935320 19935382 11 121 8.0 11.5 9.8 1.0 189 chr2L 19935193 intron sick + chr2L 19935288 intron sick + chr2L 19935382 intron sick + chr2L_11_19935001 chr2L_19935001 RAL-850 695 chr2L 19950164 19950198 chr2L 19950296 19950330 15 132 5.0 4.0 4.5 2.7 166 chr2L 19950164 intron sick + chr2L 19950247 intron sick + chr2L 19950330 intron sick + chr2L_15_19950001 chr2L_19950001 RAL-850 696 chr2L 20005831 20005893 chr2L 20010957 20011019 flea 26 5126 12.0 15.0 13.5 1.8 5188 chr2L 20005831 intron CG43861 - chr2L 20008425 intron CG43861 - chr2L 20011019 intron CG43861 - chr2L_26_20005001 chr2L_20005001 RAL-850 697 chr2L 20011681 20011759 chr2L 20011814 20011892 17 133 7.5 7.5 7.5 2.0 211 chr2L 20011681 intron CG43861 - chr2L 20011786 intron CG43861 - chr2L 20011892 intron CG43861 - chr2L_17_20010001 chr2L_20010001 RAL-850 698 chr2L 20022041 20022101 chr2L 20022204 20022264 27 163 8.5 5.0 6.8 3.5 223 chr2L 20022041 intergenic not near genes chr2L 20022152 intergenic not near genes chr2L 20022264 intergenic not near genes chr2L_27_20020001 chr2L_20020001 RAL-850 699 chr2L 20057004 20057078 chr2L 20057131 20057205 32 126 6.5 7.5 7.0 4.0 201 chr2L 20057004 intergenic not near genes chr2L 20057104 intergenic not near genes chr2L 20057205 intergenic not near genes chr2L_32_20055001 chr2L_20055001 RAL-850 700 chr2L 20122611 20122647 chr2L 20122752 20122788 18 141 7.5 13.5 10.5 1.6 177 chr2L 20122611 intergenic not near genes chr2L 20122700 intergenic not near genes chr2L 20122788 intergenic not near genes chr2L_18_20120001 chr2L_20120001 RAL-850 701 chr2L 20124281 20124360 chr2L 20124409 20124488 21 127 6.0 9.0 7.5 2.5 207 chr2L 20124281 intergenic not near genes chr2L 20124384 intergenic not near genes chr2L 20124488 intergenic not near genes chr2L_21_20120001 chr2L_20120001 RAL-850 702 chr2L 20225588 20225616 chr2L 20225715 20225743 8 128 6.5 12.0 9.2 0.8 155 chr2L 20225588 intergenic not near genes chr2L 20225666 intergenic not near genes chr2L 20225743 intergenic not near genes chr2L_8_20225001 chr2L_20225001 RAL-850 703 chr2L 20272074 20272100 chr2L 20282835 20282861 copia 11 10761 12.0 11.0 11.5 0.9 10787 chr2L 20272074 intergenic not near genes chr2L 20277468 intergenic not near genes chr2L 20282861 intergenic not near genes chr2L_11_20275001 chr2L_20275001 RAL-850 704 chr2L 20272101 20272136 chr2L 20282826 20282897 copia 18 10759 7.5 9.0 8.2 2.0 10796 chr2L 20272101 intergenic not near genes chr2L 20277499 intergenic not near genes chr2L 20282897 intergenic not near genes chr2L_18_20275001 chr2L_20275001 RAL-850 705 chr2L 20294250 20294309 chr2L 20294389 20294442 20 139 16.0 5.0 10.5 1.7 192 chr2L 20294250 intergenic CG12617 + chr2L 20294346 intergenic CG12617 + chr2L 20294442 intergenic CG12617 + chr2L_20_20290001 chr2L_20290001 RAL-850 706 chr2L 20296490 20296528 chr2L 20296621 20296622 12 128 0.0 3.5 1.8 4.3 132 chr2L 20296490 intergenic CR43414 - chr2L 20296556 intergenic CR43414 - chr2L 20296622 intergenic CR43414 - chr2L_12_20295001 chr2L_20295001 RAL-850 707 chr2L 20299967 20300020 chr2L 20300094 20300133 23 115 9.0 8.0 8.5 2.4 166 chr2L 20299967 intergenic not near genes chr2L 20300050 intergenic not near genes chr2L 20300133 intergenic not near genes chr2L_23_20300001 chr2L_20300001 RAL-850 708 chr2L 20303159 20303184 chr2L 20310677 20310701 blood 6 7518 1.5 16.0 8.8 0.6 7542 chr2L 20303159 intergenic not near genes chr2L 20306930 intergenic not near genes chr2L 20310701 intergenic not near genes chr2L_6_20305001 chr2L_20305001 RAL-850 709 chr2L 20310831 20310893 chr2L 20310960 20311022 17 128 9.5 6.5 8.0 1.9 191 chr2L 20310831 intergenic spir + chr2L 20310926 intergenic spir + chr2L 20311022 intergenic spir + chr2L_17_20310001 chr2L_20310001 RAL-850 710 chr2L 20322594 20322663 chr2L 20322727 20322794 36 129 9.0 10.0 9.5 3.4 200 chr2L 20322594 intron spir + chr2L 20322694 intron spir + chr2L 20322794 intron spir + chr2L_36_20320001 chr2L_20320001 RAL-850 711 chr2L 20372190 20372197 chr2L 20372479 20372488 pogo 6 291 28.0 15.0 21.5 0.3 298 chr2L 20372190 intergenic Ugt37a1 - chr2L 20372339 intergenic Ugt37a1 - chr2L 20372488 exon Ugt37a1 - chr2L_6_20370001 chr2L_20370001 RAL-850 712 chr2L 20372198 20372248 chr2L 20372478 20372539 pogo 24 290 12.0 15.0 13.5 1.7 341 chr2L 20372198 intergenic Ugt37a1 - chr2L 20372368 intergenic Ugt37a1 - chr2L 20372539 exon Ugt37a1 - chr2L_24_20370001 chr2L_20370001 RAL-850 713 chr2L 20376029 20376098 chr2L 20376198 20376261 33 167 6.0 10.0 8.0 3.7 232 chr2L 20376029 intergenic not near genes chr2L 20376145 intergenic not near genes chr2L 20376261 intergenic not near genes chr2L_33_20375001 chr2L_20375001 RAL-850 714 chr2L 20383250 20383301 chr2L 20383363 20383433 7 130 10.0 6.5 8.2 0.8 183 chr2L 20383250 intergenic not near genes chr2L 20383342 intergenic not near genes chr2L 20383433 intergenic not near genes chr2L_7_20380001 chr2L_20380001 RAL-850 715 chr2L 20498641 20498702 chr2L 20498790 20498851 25 149 9.0 11.0 10.0 2.3 210 chr2L 20498641 intergenic not near genes chr2L 20498746 intergenic not near genes chr2L 20498851 intergenic not near genes chr2L_25_20495001 chr2L_20495001 RAL-850 716 chr2L 20524140 20524161 chr2L 20524272 20524293 5 132 17.0 0.0 8.5 0.5 153 chr2L 20524140 intergenic not near genes chr2L 20524216 intergenic not near genes chr2L 20524293 intergenic not near genes chr2L_5_20520001 chr2L_20520001 RAL-850 717 chr2L 20545996 20546065 chr2L 20546123 20546192 35 126 8.0 11.0 9.5 3.3 196 chr2L 20545996 intergenic not near genes chr2L 20546094 intergenic not near genes chr2L 20546192 intergenic not near genes chr2L_35_20545001 chr2L_20545001 RAL-850 718 chr2L 20553148 20553182 chr2L 20553270 20553308 19 125 14.0 8.5 11.2 1.6 160 chr2L 20553148 intergenic not near genes chr2L 20553228 intergenic not near genes chr2L 20553308 intergenic not near genes chr2L_19_20550001 chr2L_20550001 RAL-850 719 chr2L 20568611 20568684 chr2L 20569051 20569124 X-element 24 439 7.0 6.0 6.5 3.2 513 chr2L 20568611 intron CR45347 + chr2L 20568868 intron CR45347 + chr2L 20569124 intron CR45347 + chr2L_24_20565001 chr2L_20565001 RAL-850 720 chr2L 20576176 20576194 chr2L 20583694 20583712 blood 7 7518 16.0 6.5 11.2 0.6 7536 chr2L 20576176 intergenic CR45347 + chr2L 20579944 intergenic not near genes chr2L 20583712 3` UTR CR44909 - chr2L_7_20575001 chr2L_20575001 RAL-850 721 chr2L 20576196 20576246 chr2L 20583693 20583758 blood 26 7516 6.5 6.5 6.5 3.5 7562 chr2L 20576196 intergenic CR45347 + chr2L 20579977 intergenic not near genes chr2L 20583758 3` UTR CR44909 - chr2L_26_20575001 chr2L_20575001 RAL-850 722 chr2L 20597043 20597113 chr2L 20597165 20597240 23 124 10.0 9.5 9.8 2.1 197 chr2L 20597043 intron CR44909 - chr2L 20597142 intron CR44909 - chr2L 20597240 intron CR44909 - chr2L_23_20595001 chr2L_20595001 RAL-850 723 chr2L 20601746 20601815 chr2L 20601869 20601944 21 128 6.0 3.0 4.5 3.8 198 chr2L 20601746 intron CR44909 - chr2L 20601845 intron CR44909 - chr2L 20601944 intron CR44909 - chr2L_21_20600001 chr2L_20600001 RAL-850 724 chr2L 20602667 20602746 chr2L 20602805 20602884 19 138 3.5 9.0 6.2 2.6 217 chr2L 20602667 intron CR44909 - chr2L 20602776 intron CR44909 - chr2L 20602884 intron CR44909 - chr2L_19_20600001 chr2L_20600001 RAL-850 725 chr2L 20607735 20607807 chr2L 20608107 20608163 21 371 3.5 11.5 7.5 2.5 428 chr2L 20607735 intron,3` UTR CR44909 -,CR43608 - chr2L 20607949 intron CR44909 - chr2L 20608163 intron CR44909 - chr2L_21_20605001 chr2L_20605001 RAL-850 726 chr2L 20626063 20626126 chr2L 20626219 20626282 22 156 9.5 10.5 10.0 2.0 219 chr2L 20626063 3` UTR CR44909 - chr2L 20626172 3` UTR CR44909 - chr2L 20626282 intergenic CR44909 - chr2L_22_20625001 chr2L_20625001 RAL-850 727 chr2L 20674781 20674858 chr2L 20674916 20674981 12 129 3.0 1.5 2.2 3.8 200 chr2L 20674781 intron CG31678 - chr2L 20674881 intron CG31678 - chr2L 20674981 intron CG31678 - chr2L_12_20670001 chr2L_20670001 RAL-850 728 chr2L 20780949 20781020 chr2L 20781108 20781178 30 149 7.5 7.5 7.5 3.5 229 chr2L 20780949 intron cad + chr2L 20781064 intron cad + chr2L 20781178 intron cad + chr2L_30_20780001 chr2L_20780001 RAL-850 729 chr2L 20791839 20791906 chr2L 20791980 20791985 39 141 7.0 11.5 9.2 3.8 146 chr2L 20791839 intron vari - chr2L 20791912 intron vari - chr2L 20791985 intron vari - chr2L_39_20790001 chr2L_20790001 RAL-850 730 chr2L 20818209 20818272 chr2L 20818686 20818749 31 477 11.5 10.0 10.8 2.6 540 chr2L 20818209 exon CheB38a - chr2L 20818479 exon CheB38a - chr2L 20818749 intergenic CheB38a - chr2L_31_20815001 chr2L_20815001 RAL-850 731 chr2L 20821455 20821521 chr2L 20821653 20821719 22 195 10.0 9.5 9.8 2.0 264 chr2L 20821455 intergenic not near genes chr2L 20821587 intergenic not near genes chr2L 20821719 intergenic not near genes chr2L_22_20820001 chr2L_20820001 RAL-850 732 chr2L 20835765 20835828 chr2L 20836532 20836595 Quasimodo 23 767 7.0 10.5 8.8 2.3 830 chr2L 20835765 5` UTR Oseg5 - chr2L 20836180 intergenic Oseg5 -,Spn38F - chr2L 20836595 intergenic Spn38F - chr2L_23_20835001 chr2L_20835001 RAL-850 733 chr2L 20839976 20840047 chr2L 20840238 20840309 26 261 6.0 6.0 6.0 3.7 333 chr2L 20839976 intergenic not near genes chr2L 20840142 intergenic not near genes chr2L 20840309 intergenic CG31676 + chr2L_26_20840001 chr2L_20840001 RAL-850 734 chr2L 20842097 20842173 chr2L 20842271 20842347 43 171 8.0 6.5 7.2 5.2 250 chr2L 20842097 intron CG31676 + chr2L 20842222 intron CG31676 + chr2L 20842347 intron CG31676 + chr2L_43_20840001 chr2L_20840001 RAL-850 735 chr2L 20852381 20852441 chr2L 20852497 20852572 27 126 2.5 10.5 6.5 3.6 191 chr2L 20852381 intergenic twit + chr2L 20852476 intergenic twit + chr2L 20852572 intergenic twit + chr2L_27_20850001 chr2L_20850001 RAL-850 736 chr2L 20891494 20891535 chr2L 20896645 20896657 jockey 16 5148 8.0 12.5 10.2 1.4 5163 chr2L 20891494 intron,intron CG43739 -,sky - chr2L 20894076 intron,intron CG43739 -,sky - chr2L 20896657 intron,intron CG43739 -,sky - chr2L_16_20890001 chr2L_20890001 RAL-850 737 chr2L 20891537 20891546 chr2L 20896635 20896697 jockey 5 5140 6.5 11.5 9.0 0.5 5160 chr2L 20891537 intron,intron CG43739 -,sky - chr2L 20894117 intron,intron CG43739 -,sky - chr2L 20896697 intron,intron CG43739 -,sky - chr2L_5_20890001 chr2L_20890001 RAL-850 738 chr2L 20911019 20911058 chr2L 20911130 20911176 18 123 13.0 18.5 15.8 1.1 157 chr2L 20911019 intron,intron CG43739 -,sky - chr2L 20911098 intron,intron CG43739 -,sky - chr2L 20911176 intron,intron CG43739 -,sky - chr2L_18_20910001 chr2L_20910001 RAL-850 739 chr2L 20928626 20928633 chr2L 20928846 20928853 6 219 6.0 23.5 14.8 0.4 227 chr2L 20928626 intergenic not near genes chr2L 20928740 intergenic not near genes chr2L 20928853 intergenic not near genes chr2L_6_20925001 chr2L_20925001 RAL-850 740 chr2L 20967033 20967107 chr2L 20967169 20967243 29 135 6.5 8.0 7.2 3.5 210 chr2L 20967033 3` UTR CG42238 - chr2L 20967138 3` UTR CG42238 - chr2L 20967243 3` UTR CG42238 - chr2L_29_20965001 chr2L_20965001 RAL-850 741 chr2L 20976606 20976662 chr2L 20981471 20981527 X-element 20 4864 7.5 12.5 10.0 1.8 4921 chr2L 20976606 intron CG42238 - chr2L 20979066 intron CG42238 - chr2L 20981527 intron CG42238 - chr2L_20_20975001 chr2L_20975001 RAL-850 742 chr2L 20982219 20982293 chr2L 20982362 20982416 31 141 8.0 11.0 9.5 3.0 197 chr2L 20982219 intron CG42238 - chr2L 20982318 intron CG42238 - chr2L 20982416 intron CG42238 - chr2L_31_20980001 chr2L_20980001 RAL-850 743 chr2L 21003517 21003579 chr2L 21003652 21003713 24 134 7.5 12.5 10.0 2.2 196 chr2L 21003517 intron CG42238 - chr2L 21003615 intron CG42238 - chr2L 21003713 intron CG42238 - chr2L_24_21000001 chr2L_21000001 RAL-850 744 chr2L 21020237 21020301 chr2L 21023964 21024023 NOF 21 3723 4.0 10.5 7.2 2.6 3786 chr2L 21020237 intron CG42238 - chr2L 21022130 intron CG42238 - chr2L 21024023 intron CG42238 - chr2L_21_21020001 chr2L_21020001 RAL-850 745 chr2L 21041095 21041158 chr2L 21049406 21049469 Tirant 24 8308 10.5 13.5 12.0 1.8 8374 chr2L 21041095 intron CG42238 - chr2L 21045282 intron CG42238 - chr2L 21049469 intron CG42238 - chr2L_24_21045001 chr2L_21045001 RAL-850 746 chr2L 21074876 21074947 chr2L 21075017 21075088 17 141 8.0 7.0 7.5 2.0 212 chr2L 21074876 intergenic not near genes chr2L 21074982 intergenic tadr + chr2L 21075088 intergenic tadr + chr2L_17_21070001 chr2L_21070001 RAL-850 747 chr2L 21113642 21113714 chr2L 21113785 21113857 22 142 11.0 9.0 10.0 2.0 215 chr2L 21113642 intron Nhe2 + chr2L 21113750 intron Nhe2 + chr2L 21113857 intron Nhe2 + chr2L_22_21110001 chr2L_21110001 RAL-850 748 chr2L 21169804 21169868 chr2L 21169936 21170000 26 132 8.0 12.0 10.0 2.4 196 chr2L 21169804 intron Acon + chr2L 21169902 intron Acon + chr2L 21170000 intron Acon + chr2L_26_21165001 chr2L_21165001 RAL-850 749 chr2L 21286564 21286629 chr2L 21286692 21286758 19 128 7.5 11.5 9.5 1.8 194 chr2L 21286564 exon Mio - chr2L 21286661 intron Mio - chr2L 21286758 intron Mio - chr2L_19_21285001 chr2L_21285001 RAL-850 750 chr2L 21347542 21347570 chr2L 21355054 21355092 blood 14 7521 9.0 5.0 7.0 1.8 7550 chr2L 21347542 intron Tsp39D + chr2L 21351317 intron Tsp39D + chr2L 21355092 intron Tsp39D + chr2L_14_21350001 chr2L_21350001 RAL-850 751 chr2L 21596990 21597030 chr2L 21604784 21604824 roo 7 7792 14.0 10.0 12.0 0.5 7834 chr2L 21596990 intergenic not near genes chr2L 21600907 intergenic not near genes chr2L 21604824 intergenic not near genes chr2L_7_21600001 chr2L_21600001 RAL-850 752 chr2L 21691792 21691813 chr2L 21698312 21698331 Burdock 6 6520 9.5 1.0 5.2 1.0 6539 chr2L 21691792 intron CG31619 + chr2L 21695062 intron CG31619 + chr2L 21698331 intron CG31619 + chr2L_6_21695001 chr2L_21695001 RAL-850 753 chr2L 21745208 21745276 chr2L 21745348 21745416 9 140 4.0 5.0 4.5 1.6 208 chr2L 21745208 intron step - chr2L 21745312 intron step - chr2L 21745416 intron step - chr2L_9_21745001 chr2L_21745001 RAL-850 754 chr2L 21750058 21750068 chr2L 21750428 21750438 4 370 15.5 5.0 10.2 0.4 380 chr2L 21750058 intron step - chr2L 21750248 intron step - chr2L 21750438 intron step - chr2L_4_21750001 chr2L_21750001 RAL-850 755 chr2L 21750074 21750124 chr2L 21750421 21750497 6 368 3.5 4.0 3.8 1.2 423 chr2L 21750074 intron step - chr2L 21750286 intron step - chr2L 21750497 intron step - chr2L_6_21750001 chr2L_21750001 RAL-850 756 chr2L 21754621 21754686 chr2L 21754752 21754817 25 131 7.5 9.0 8.2 2.7 196 chr2L 21754621 intron step - chr2L 21754719 intron step - chr2L 21754817 intron step - chr2L_25_21750001 chr2L_21750001 RAL-850 757 chr2L 21806185 21806259 chr2L 21806338 21806358 28 150 8.0 5.0 6.5 3.7 173 chr2L 21806185 intergenic not near genes chr2L 21806272 intergenic not near genes chr2L 21806358 intergenic not near genes chr2L_28_21805001 chr2L_21805001 RAL-850 758 chr2L 21852330 21852371 chr2L 21852695 21852736 17 365 12.0 4.5 8.2 1.8 406 chr2L 21852330 intergenic not near genes chr2L 21852533 intergenic not near genes chr2L 21852736 intergenic not near genes chr2L_17_21850001 chr2L_21850001 RAL-850 759 chr2L 21981639 21981711 chr2L 21990853 21990889 roo 26 9211 10.5 10.5 10.5 2.3 9250 chr2L 21981639 exon CG2528 - chr2L 21986264 intron CG2528 - chr2L 21990889 exon CG2528 - chr2L_26_21985001 chr2L_21985001 RAL-850 760 chr2L 22001603 22001671 chr2L 22001729 22001797 16 126 3.0 5.5 4.2 3.1 194 chr2L 22001603 intergenic not near genes chr2L 22001700 intergenic not near genes chr2L 22001797 intergenic not near genes chr2L_16_22000001 chr2L_22000001 RAL-850 761 chr2L 22007883 22007940 chr2L 22008015 22008072 15 132 8.0 7.5 7.8 1.7 189 chr2L 22007883 intergenic not near genes chr2L 22007978 intergenic not near genes chr2L 22008072 intergenic not near genes chr2L_15_22005001 chr2L_22005001 RAL-850 762 chr2L 22025790 22025853 chr2L 22025913 22025982 20 128 7.5 10.5 9.0 2.0 192 chr2L 22025790 intergenic tio + chr2L 22025886 intergenic tio + chr2L 22025982 intergenic tio + chr2L_20_22025001 chr2L_22025001 RAL-850 763 chr2L 22037354 22037365 chr2L 22037632 22037643 6 278 2.5 10.5 6.5 0.8 289 chr2L 22037354 intergenic not near genes chr2L 22037498 intergenic CG41434 + chr2L 22037643 intergenic CG41434 + chr2L_6_22035001 chr2L_22035001 RAL-850 764 chr2L 22047211 22047256 chr2L 22047386 22047431 16 174 8.0 9.5 8.8 1.6 220 chr2L 22047211 intergenic not near genes chr2L 22047321 intergenic not near genes chr2L 22047431 intergenic not near genes chr2L_16_22045001 chr2L_22045001 RAL-850 765 chr2L 22082206 22082210 chr2L 22082347 22082351 INE-1 6 141 3.5 14.5 9.0 0.6 145 chr2L 22082206 intergenic not near genes chr2L 22082278 intergenic not near genes chr2L 22082351 intergenic not near genes chr2L_6_22080001 chr2L_22080001 RAL-850 766 chr2L 22101437 22101502 chr2L 22101800 22101834 28 360 6.5 9.5 8.0 3.1 397 chr2L 22101437 intergenic not near genes chr2L 22101636 intergenic not near genes chr2L 22101834 intergenic not near genes chr2L_28_22100001 chr2L_22100001 RAL-850 767 chr2L 22179499 22179575 chr2L 22179626 22179627 27 122 13.0 13.5 13.2 1.9 128 chr2L 22179499 intron CG3635 + chr2L 22179563 intron CG3635 + chr2L 22179627 intron CG3635 + chr2L_27_22175001 chr2L_22175001 RAL-850 768 chr2L 22191981 22191994 chr2L 22192120 22192133 12 138 20.5 6.0 13.2 0.8 152 chr2L 22191981 intron Ir40a - chr2L 22192057 intron Ir40a - chr2L 22192133 intron Ir40a - chr2L_12_22190001 chr2L_22190001 RAL-850 769 chr2L 22191997 22192049 chr2L 22192117 22192188 22 135 10.5 6.0 8.2 2.4 191 chr2L 22191997 intron Ir40a - chr2L 22192092 intron Ir40a - chr2L 22192188 intron Ir40a - chr2L_22_22190001 chr2L_22190001 RAL-850 770 chr2L 22212088 22212163 chr2L 22212685 22212760 23 597 1.5 5.0 3.2 5.5 672 chr2L 22212088 intron Ir40a - chr2L 22212424 intron Ir40a - chr2L 22212760 exon Ir40a - chr2L_23_22210001 chr2L_22210001 RAL-850 771 chr2L 22215869 22215907 chr2L 22216005 22216043 17 136 10.0 10.0 10.0 1.5 174 chr2L 22215869 intergenic not near genes chr2L 22215956 intergenic not near genes chr2L 22216043 intergenic not near genes chr2L_17_22215001 chr2L_22215001 RAL-850 772 chr2L 22215915 22215925 chr2L 22215996 22216061 6 127 4.5 9.5 7.0 0.8 146 chr2L 22215915 intergenic not near genes chr2L 22215988 intergenic not near genes chr2L 22216061 intergenic not near genes chr2L_6_22215001 chr2L_22215001 RAL-850 773 chr2L 22239379 22239453 chr2L 22239509 22239579 28 124 7.5 7.5 7.5 3.3 200 chr2L 22239379 intron CR43765 - chr2L 22239479 3` UTR CR43765 - chr2L 22239579 3` UTR CR43765 - chr2L_28_22235001 chr2L_22235001 RAL-850 774 chr2L 22258572 22258635 chr2L 22260746 22260809 G6 24 2173 9.5 10.5 10.0 2.2 2237 chr2L 22258572 intergenic Tif-IA + chr2L 22259690 intergenic not near genes chr2L 22260809 intergenic not near genes chr2L_24_22255001 chr2L_22255001 RAL-850 775 chr2L 22296869 22296920 chr2L 22297046 22297097 12 177 5.0 9.5 7.2 1.5 228 chr2L 22296869 intergenic not near genes chr2L 22296983 intergenic not near genes chr2L 22297097 intergenic not near genes chr2L_12_22295001 chr2L_22295001 RAL-850 776 chr2L 22548885 22548929 chr2L 22550132 22550204 1360 12 1257 0.0 8.5 4.2 2.3 1319 chr2L 22548885 intergenic CG17490 + chr2L 22549544 intergenic not near genes chr2L 22550204 intergenic CG17493 + chr2L_12_22545001 chr2L_22545001 RAL-850 777 chr2L 22581928 22581995 chr2L 22583767 22583834 S-element 21 1839 10.0 8.5 9.2 2.1 1906 chr2L 22581928 intron CG17494 + chr2L 22582881 intron CG17494 + chr2L 22583834 intron CG17494 + chr2L_21_22580001 chr2L_22580001 RAL-850 778 chr2L 22706762 22706809 chr2L 22706914 22706962 11 152 8.5 3.5 6.0 1.6 200 chr2L 22706762 intron CG40006 - chr2L 22706862 intron CG40006 - chr2L 22706962 intron CG40006 - chr2L_11_22705001 chr2L_22705001 RAL-850 779 chr2L 22776381 22776449 chr2L 22778220 22778288 S-element 21 1839 3.5 4.5 4.0 4.2 1907 chr2L 22776381 intergenic not near genes chr2L 22777334 intergenic not near genes chr2L 22778288 intergenic not near genes chr2L_21_22775001 chr2L_22775001 RAL-850 780 chr2L 23174909 23174941 chr2L 23175889 23175921 INE-1 13 980 39.0 69.5 54.2 0.2 1012 chr2L 23174909 intergenic CG12567 - chr2L 23175415 intergenic not near genes chr2L 23175921 intergenic not near genes chr2L_13_23175001 chr2L_23175001 RAL-850 781 chr2L 23173086 23173140 chr2L 23176260 23176324 25 3175 54.5 68.0 61.2 0.4 3238 chr2L 23173086 intron,5` UTR CG12567 -,CR44268 + chr2L 23174705 intergenic CG12567 - chr2L 23176324 intergenic not near genes chr2L_25_23170001 chr2L_23170001 RAL-850 782 chr2L 23181356 23181377 chr2L 23181515 23181536 6 159 21.0 11.0 16.0 0.4 180 chr2L 23181356 intergenic not near genes chr2L 23181446 intergenic not near genes chr2L 23181536 intergenic not near genes chr2L_6_23180001 chr2L_23180001 RAL-850 783 chr2R 529316 529338 chr2R 537991 538012 Max-element 8 8674 6.5 8.5 7.5 0.9 8696 chr2R 529316 intron CG40378 + chr2R 533664 intron CG40378 + chr2R 538012 intron CG40378 + chr2R_8_530001 chr2R_530001 RAL-850 784 chr2R 1082366 1082368 chr2R 1087192 1087194 Doc 5 4826 15.5 27.0 21.2 0.2 4828 chr2R 1082366 intron rl + chr2R 1084780 intron rl + chr2R 1087194 intron rl + chr2R_5_1080001 chr2R_1080001 RAL-850 785 chr2R 1338330 1338341 chr2R 1338461 1338472 5 131 40.0 43.5 41.8 0.1 142 chr2R 1338330 intergenic not near genes chr2R 1338401 intergenic not near genes chr2R 1338472 intergenic not near genes chr2R_5_1335001 chr2R_1335001 RAL-850 786 chr2R 1516564 1516603 chr2R 1521342 1521381 1731 44 4777 66.5 50.0 58.2 0.7 4817 chr2R 1516564 exon Maf1 - chr2R 1518972 intron Maf1 - chr2R 1521381 5` UTR Maf1 - chr2R_44_1515001 chr2R_1515001 RAL-850 787 chr2R 1919584 1919639 chr2R 1920010 1920065 9 427 24.5 20.0 22.2 0.4 481 chr2R 1919584 intron CG17684 - chr2R 1919824 intron CG17684 - chr2R 1920065 intron CG17684 - chr2R_9_1915001 chr2R_1915001 RAL-850 788 chr2R 2498947 2499002 chr2R 2508144 2508199 roo 19 9194 6.5 7.5 7.0 2.4 9252 chr2R 2498947 intron MFS17 - chr2R 2503573 intron MFS17 - chr2R 2508199 intron MFS17 - chr2R_19_2500001 chr2R_2500001 RAL-850 789 chr2R 1373053 1373070 chr2R 2589301 2589325 Cr1a 4 1216250 22.0 29.0 25.5 0.2 1216272 chr2R 1373053 intron l(2)41Ab + chr2R 1981189 intron CG17684 - chr2R 2589325 intergenic not near genes chr2R_4_1980001 chr2R_1980001 RAL-850 790 chr2R 2591485 2591507 chr2R 2594211 2594233 roo 7 2726 47.0 33.5 40.2 0.2 2748 chr2R 2591485 intergenic not near genes chr2R 2592859 intergenic not near genes chr2R 2594233 intergenic not near genes chr2R_7_2590001 chr2R_2590001 RAL-850 791 chr2R 3144044 3144108 chr2R 3393366 3393436 Doc 16 249327 25.0 37.5 31.2 0.5 249392 chr2R 3144044 intron CG42596 + chr2R 3268740 intergenic not near genes chr2R 3393436 intergenic not near genes chr2R_16_3265001 chr2R_3265001 RAL-850 792 chr2R 3291927 3292103 chr2R 3915130 3915314 8 623210 22.5 44.5 33.5 0.2 623387 chr2R 3291927 intergenic not near genes chr2R 3603620 intergenic not near genes chr2R 3915314 intron uex - chr2R_8_3600001 chr2R_3600001 RAL-850 793 chr2R 3532574 3532629 chr2R 3536067 3536122 Doc 7 3493 1.0 4.5 2.8 1.8 3548 chr2R 3532574 intergenic not near genes chr2R 3534348 intergenic not near genes chr2R 3536122 intergenic not near genes chr2R_7_3530001 chr2R_3530001 RAL-850 794 chr2R 4141910 4141918 chr2R 4150694 4150702 Dm88 4 8784 22.0 23.0 22.5 0.2 8792 chr2R 4141910 intergenic not near genes chr2R 4146306 intergenic not near genes chr2R 4150702 intergenic not near genes chr2R_4_4145001 chr2R_4145001 RAL-850 795 chr2R 4604508 4604576 chr2R 4604637 4604706 19 128 9.5 15.0 12.2 1.4 198 chr2R 4604508 intron p120ctn + chr2R 4604607 intron p120ctn + chr2R 4604706 intron p120ctn + chr2R_19_4600001 chr2R_4600001 RAL-850 796 chr2R 4605678 4605688 chr2R 4605848 4605866 diver2 6 175 14.5 12.5 13.5 0.4 188 chr2R 4605678 intron p120ctn + chr2R 4605772 intron p120ctn + chr2R 4605866 intron p120ctn + chr2R_6_4605001 chr2R_4605001 RAL-850 797 chr2R 4622922 4622978 chr2R 4624125 4624187 1360 24 1207 6.0 11.5 8.8 2.4 1265 chr2R 4622922 intergenic CR44101 - chr2R 4623554 intergenic not near genes chr2R 4624187 intergenic not near genes chr2R_24_4620001 chr2R_4620001 RAL-850 798 chr2R 4702454 4702502 chr2R 4702642 4702690 16 188 6.5 15.0 10.8 1.4 236 chr2R 4702454 intron Nipped-B - chr2R 4702572 intron Nipped-B - chr2R 4702690 intron Nipped-B - chr2R_16_4700001 chr2R_4700001 RAL-850 799 chr2R 4750302 4750367 chr2R 4751509 4751530 1360 11 1201 3.5 8.0 5.8 1.6 1228 chr2R 4750302 intron conu + chr2R 4750916 intron conu + chr2R 4751530 intron conu + chr2R_11_4750001 chr2R_4750001 RAL-850 800 chr2R 4887259 4887336 chr2R 4887533 4887610 25 274 4.0 6.0 5.0 4.2 351 chr2R 4887259 intergenic not near genes chr2R 4887434 intergenic not near genes chr2R 4887610 intergenic not near genes chr2R_25_4885001 chr2R_4885001 RAL-850 801 chr2R 5019232 5019303 chr2R 5019368 5019439 22 135 11.5 9.5 10.5 1.9 207 chr2R 5019232 intron Ir41a + chr2R 5019336 intron Ir41a + chr2R 5019439 intron Ir41a + chr2R_22_5015001 chr2R_5015001 RAL-850 802 chr2R 5040750 5040756 chr2R 5041290 5041296 4 540 0.0 15.0 7.5 0.5 546 chr2R 5040750 intergenic not near genes chr2R 5041023 intergenic not near genes chr2R 5041296 intergenic not near genes chr2R_4_5040001 chr2R_5040001 RAL-850 803 chr2R 5040758 5040764 chr2R 5041288 5041304 5 538 0.0 15.0 7.5 0.6 546 chr2R 5040758 intergenic not near genes chr2R 5041031 intergenic not near genes chr2R 5041304 intergenic not near genes chr2R_5_5040001 chr2R_5040001 RAL-850 804 chr2R 5075183 5075196 chr2R 5075354 5075374 6 177 18.5 0.0 9.2 0.6 191 chr2R 5075183 intergenic not near genes chr2R 5075278 intergenic not near genes chr2R 5075374 intergenic not near genes chr2R_6_5075001 chr2R_5075001 RAL-850 805 chr2R 5075220 5075362 chr2R 5075761 5075828 22 513 0.0 4.0 2.0 7.3 608 chr2R 5075220 intergenic not near genes chr2R 5075524 intergenic not near genes chr2R 5075828 intergenic not near genes chr2R_22_5075001 chr2R_5075001 RAL-850 806 chr2R 5080761 5080810 chr2R 5080877 5080951 17 138 8.0 7.5 7.8 1.9 190 chr2R 5080761 intergenic not near genes chr2R 5080856 intergenic not near genes chr2R 5080951 intergenic not near genes chr2R_17_5080001 chr2R_5080001 RAL-850 807 chr2R 5125210 5125275 chr2R 5125579 5125647 26 371 4.0 7.0 5.5 4.0 437 chr2R 5125210 intron gus - chr2R 5125428 intron gus - chr2R 5125647 intron gus - chr2R_26_5125001 chr2R_5125001 RAL-850 808 chr2R 5179915 5179925 chr2R 5180098 5180108 8 183 24.5 8.0 16.2 0.5 193 chr2R 5179915 intron Nipped-A - chr2R 5180012 intron Nipped-A - chr2R 5180108 intron Nipped-A - chr2R_8_5180001 chr2R_5180001 RAL-850 809 chr2R 5179927 5179982 chr2R 5180096 5180150 21 181 13.0 7.0 10.0 1.9 223 chr2R 5179927 intron Nipped-A - chr2R 5180038 intron Nipped-A - chr2R 5180150 intron Nipped-A - chr2R_21_5180001 chr2R_5180001 RAL-850 810 chr2R 5192696 5192709 chr2R 5192823 5192836 6 127 16.5 10.5 13.5 0.4 140 chr2R 5192696 intron Nipped-A - chr2R 5192766 intron Nipped-A - chr2R 5192836 intron Nipped-A - chr2R_6_5190001 chr2R_5190001 RAL-850 811 chr2R 5192711 5192732 chr2R 5192818 5192859 5 123 11.0 10.0 10.5 0.4 148 chr2R 5192711 intron Nipped-A - chr2R 5192785 intron Nipped-A - chr2R 5192859 intron Nipped-A - chr2R_5_5190001 chr2R_5190001 RAL-850 812 chr2R 5237299 5237367 chr2R 5237431 5237462 17 127 5.5 0.0 2.8 4.5 163 chr2R 5237299 intron Nipped-A - chr2R 5237380 intron Nipped-A - chr2R 5237462 intron Nipped-A - chr2R_17_5235001 chr2R_5235001 RAL-850 813 chr2R 5417950 5418016 chr2R 5420631 5420697 Burdock 23 2682 6.0 11.5 8.8 2.3 2747 chr2R 5417950 intron laccase2 + chr2R 5419324 intron laccase2 + chr2R 5420697 intron laccase2 + chr2R_23_5415001 chr2R_5415001 RAL-850 814 chr2R 5455730 5455799 chr2R 5455856 5455926 28 127 9.0 8.0 8.5 2.9 196 chr2R 5455730 3` UTR laccase2 + chr2R 5455828 3` UTR laccase2 + chr2R 5455926 3` UTR laccase2 + chr2R_28_5455001 chr2R_5455001 RAL-850 815 chr2R 5472407 5472450 chr2R 5472871 5472922 16 471 6.5 8.5 7.5 1.9 515 chr2R 5472407 intron CG30440 - chr2R 5472664 intron CG30440 - chr2R 5472922 intron CG30440 - chr2R_16_5470001 chr2R_5470001 RAL-850 816 chr2R 5515949 5516015 chr2R 5516342 5516408 19 393 7.0 10.0 8.5 2.0 459 chr2R 5515949 intron CG30438 + chr2R 5516178 intron CG30438 + chr2R 5516408 intron CG30438 + chr2R_19_5515001 chr2R_5515001 RAL-850 817 chr2R 5653317 5653386 chr2R 5653466 5653499 22 147 6.0 8.0 7.0 2.8 182 chr2R 5653317 intergenic CG1344 + chr2R 5653408 intergenic CG1344 + chr2R 5653499 intergenic CG1344 + chr2R_22_5650001 chr2R_5650001 RAL-850 818 chr2R 5664237 5664311 chr2R 5664367 5664419 37 126 10.5 9.5 10.0 3.4 182 chr2R 5664237 5` UTR CR45472 + chr2R 5664328 intron CR45472 + chr2R 5664419 intron CR45472 + chr2R_37_5660001 chr2R_5660001 RAL-850 819 chr2R 5670135 5670155 chr2R 5670261 5670281 4 126 3.5 9.0 6.2 0.6 146 chr2R 5670135 intergenic CG8245 + chr2R 5670208 intergenic CG8245 + chr2R 5670281 intergenic CG8245 + chr2R_4_5670001 chr2R_5670001 RAL-850 820 chr2R 5674546 5674598 chr2R 5674679 5674731 7 133 8.0 3.5 5.8 1.0 185 chr2R 5674546 intergenic not near genes chr2R 5674638 intergenic not near genes chr2R 5674731 intergenic not near genes chr2R_7_5670001 chr2R_5670001 RAL-850 821 chr2R 5716988 5717047 chr2R 5717114 5717173 18 126 5.0 5.5 5.2 2.9 185 chr2R 5716988 intron ap - chr2R 5717080 intron ap - chr2R 5717173 intron ap - chr2R_18_5715001 chr2R_5715001 RAL-850 822 chr2R 5750411 5750453 chr2R 5750553 5750595 18 142 16.0 11.5 13.8 1.2 184 chr2R 5750411 intergenic not near genes chr2R 5750503 intergenic not near genes chr2R 5750595 intergenic not near genes chr2R_18_5750001 chr2R_5750001 RAL-850 823 chr2R 5772479 5772550 chr2R 5772623 5772694 28 144 5.5 5.5 5.5 4.3 215 chr2R 5772479 3` UTR Gp210 + chr2R 5772586 3` UTR Gp210 + chr2R 5772694 3` UTR Gp210 + chr2R_28_5770001 chr2R_5770001 RAL-850 824 chr2R 5772786 5772852 chr2R 5772918 5772984 21 132 5.5 6.0 5.8 3.1 198 chr2R 5772786 3` UTR Gp210 + chr2R 5772885 3` UTR Gp210 + chr2R 5772984 3` UTR Gp210 + chr2R_21_5770001 chr2R_5770001 RAL-850 825 chr2R 5790419 5790488 chr2R 5790554 5790623 16 135 6.5 8.5 7.5 1.9 204 chr2R 5790419 intergenic not near genes chr2R 5790521 intergenic not near genes chr2R 5790623 intergenic not near genes chr2R_16_5790001 chr2R_5790001 RAL-850 826 chr2R 5861252 5861301 chr2R 5861417 5861472 18 166 11.5 6.5 9.0 1.8 220 chr2R 5861252 intergenic dpr12 + chr2R 5861362 intergenic not near genes chr2R 5861472 intergenic not near genes chr2R_18_5860001 chr2R_5860001 RAL-850 827 chr2R 5861302 5861317 chr2R 5861413 5861462 7 154 8.5 6.0 7.2 0.9 160 chr2R 5861302 intergenic dpr12 + chr2R 5861382 intergenic not near genes chr2R 5861462 intergenic not near genes chr2R_7_5860001 chr2R_5860001 RAL-850 828 chr2R 5869234 5869299 chr2R 5874360 5874425 flea 30 5126 10.5 9.0 9.8 2.8 5191 chr2R 5869234 intergenic not near genes chr2R 5871830 intergenic not near genes chr2R 5874425 intergenic not near genes chr2R_30_5870001 chr2R_5870001 RAL-850 829 chr2R 5878878 5878952 chr2R 5879008 5879082 33 130 5.0 5.0 5.0 5.5 204 chr2R 5878878 intergenic CG44438 - chr2R 5878980 intergenic CG44438 - chr2R 5879082 intergenic CG44438 - chr2R_33_5875001 chr2R_5875001 RAL-850 830 chr2R 5885316 5885378 chr2R 5885495 5885557 18 179 6.5 5.5 6.0 2.6 241 chr2R 5885316 5` UTR CR44125 + chr2R 5885436 5` UTR CR44125 + chr2R 5885557 5` UTR CR44125 + chr2R_18_5885001 chr2R_5885001 RAL-850 831 chr2R 5902113 5902184 chr2R 5909722 5909793 17.6 11 7609 6.0 9.0 7.5 1.3 7680 chr2R 5902113 5` UTR CG43366 + chr2R 5905953 intron CG43366 + chr2R 5909793 intron CG43366 + chr2R_11_5905001 chr2R_5905001 RAL-850 832 chr2R 5914127 5914133 chr2R 5914433 5914454 5 314 17.0 9.5 13.2 0.4 327 chr2R 5914127 intron CG43366 + chr2R 5914290 intron CG43366 + chr2R 5914454 intron CG43366 + chr2R_5_5910001 chr2R_5910001 RAL-850 833 chr2R 5914134 5914160 chr2R 5914424 5914499 15 322 9.0 5.0 7.0 1.9 365 chr2R 5914134 intron CG43366 + chr2R 5914316 intron CG43366 + chr2R 5914499 intron CG43366 + chr2R_15_5910001 chr2R_5910001 RAL-850 834 chr2R 5947018 5947079 chr2R 5947189 5947250 27 171 10.5 5.5 8.0 3.0 232 chr2R 5947018 intergenic not near genes chr2R 5947134 intergenic not near genes chr2R 5947250 intergenic not near genes chr2R_27_5945001 chr2R_5945001 RAL-850 835 chr2R 5994414 5994453 chr2R 5994553 5994586 INE-1 17 139 10.0 8.0 9.0 1.7 172 chr2R 5994414 intron Src42A + chr2R 5994500 intron Src42A + chr2R 5994586 intron Src42A + chr2R_17_5990001 chr2R_5990001 RAL-850 836 chr2R 6016743 6016810 chr2R 6016877 6016944 23 134 7.0 10.0 8.5 2.4 201 chr2R 6016743 intergenic not near genes chr2R 6016844 intergenic not near genes chr2R 6016944 intergenic not near genes chr2R_23_6015001 chr2R_6015001 RAL-850 837 chr2R 6088326 6088340 chr2R 6088469 6088483 4 143 18.5 9.5 14.0 0.3 157 chr2R 6088326 intergenic not near genes chr2R 6088404 intergenic not near genes chr2R 6088483 intergenic not near genes chr2R_4_6085001 chr2R_6085001 RAL-850 838 chr2R 6088341 6088387 chr2R 6088467 6088530 24 140 10.0 8.5 9.2 2.4 189 chr2R 6088341 intergenic not near genes chr2R 6088436 intergenic not near genes chr2R 6088530 intergenic not near genes chr2R_24_6085001 chr2R_6085001 RAL-850 839 chr2R 6096675 6096749 chr2R 6101923 6101947 BS 26 5232 12.5 13.5 13.0 1.9 5272 chr2R 6096675 intron EcR - chr2R 6099311 intron EcR - chr2R 6101947 intron EcR - chr2R_26_6095001 chr2R_6095001 RAL-850 840 chr2R 6129283 6129294 chr2R 6129410 6129422 7 128 30.0 11.0 20.5 0.3 139 chr2R 6129283 intron EcR - chr2R 6129352 intron EcR - chr2R 6129422 intron EcR - chr2R_7_6125001 chr2R_6125001 RAL-850 841 chr2R 6129303 6129351 chr2R 6129430 6129479 18 128 14.0 16.0 15.0 1.1 176 chr2R 6129303 intron EcR - chr2R 6129391 intron EcR - chr2R 6129479 intron EcR - chr2R_18_6125001 chr2R_6125001 RAL-850 842 chr2R 6147679 6147710 chr2R 6148037 6148068 10 358 15.5 8.5 12.0 0.8 389 chr2R 6147679 intron EcR - chr2R 6147874 intron EcR - chr2R 6148068 intron EcR - chr2R_10_6145001 chr2R_6145001 RAL-850 843 chr2R 6168166 6168220 chr2R 6168298 6168352 24 132 3.5 11.0 7.2 2.9 186 chr2R 6168166 intron EcR - chr2R 6168259 intron EcR - chr2R 6168352 intron EcR - chr2R_24_6165001 chr2R_6165001 RAL-850 844 chr2R 6178075 6178145 chr2R 6178251 6178321 32 175 4.0 9.0 6.5 4.3 246 chr2R 6178075 intergenic not near genes chr2R 6178198 intergenic not near genes chr2R 6178321 intergenic not near genes chr2R_32_6175001 chr2R_6175001 RAL-850 845 chr2R 6178642 6178711 chr2R 6178779 6178828 22 136 7.0 8.5 7.8 2.5 186 chr2R 6178642 intergenic not near genes chr2R 6178735 intergenic not near genes chr2R 6178828 intergenic not near genes chr2R_22_6175001 chr2R_6175001 RAL-850 846 chr2R 6194643 6194690 chr2R 6194776 6194823 13 133 10.5 14.0 12.2 1.0 180 chr2R 6194643 intron Ptr - chr2R 6194733 intron Ptr - chr2R 6194823 intron Ptr - chr2R_13_6190001 chr2R_6190001 RAL-850 847 chr2R 6247761 6247838 chr2R 6247889 6247895 35 126 8.0 5.5 6.8 4.5 134 chr2R 6247761 intron Pld + chr2R 6247828 intron Pld + chr2R 6247895 intron Pld + chr2R_35_6245001 chr2R_6245001 RAL-850 848 chr2R 6494491 6494554 chr2R 6499303 6499329 F-element 14 4809 7.0 2.0 4.5 2.5 4838 chr2R 6494491 intergenic not near genes chr2R 6496910 intergenic not near genes chr2R 6499329 intergenic not near genes chr2R_14_6495001 chr2R_6495001 RAL-850 849 chr2R 6500915 6500984 chr2R 6501060 6501124 30 144 11.0 8.0 9.5 2.9 209 chr2R 6500915 intergenic not near genes chr2R 6501020 intergenic not near genes chr2R 6501124 intergenic not near genes chr2R_30_6500001 chr2R_6500001 RAL-850 850 chr2R 6547898 6547956 chr2R 6548111 6548169 18 211 7.0 8.0 7.5 2.1 271 chr2R 6547898 intron jing + chr2R 6548034 intron jing + chr2R 6548169 intron jing + chr2R_18_6545001 chr2R_6545001 RAL-850 851 chr2R 6579735 6579778 chr2R 6584871 6584914 flea 17 5136 10.0 12.0 11.0 1.4 5179 chr2R 6579735 intron jing + chr2R 6582324 intron jing + chr2R 6584914 intron jing + chr2R_17_6580001 chr2R_6580001 RAL-850 852 chr2R 6579783 6579798 chr2R 6584862 6584934 flea 11 5130 4.5 9.0 6.8 1.4 5151 chr2R 6579783 intron jing + chr2R 6582358 intron jing + chr2R 6584934 intron jing + chr2R_11_6580001 chr2R_6580001 RAL-850 853 chr2R 6691079 6691145 chr2R 6691208 6691274 39 127 13.0 8.0 10.5 3.4 195 chr2R 6691079 intron CG9422 + chr2R 6691176 intron CG9422 + chr2R 6691274 intron CG9422 + chr2R_39_6690001 chr2R_6690001 RAL-850 854 chr2R 6696565 6696631 chr2R 6696698 6696740 28 126 13.5 17.0 15.2 1.7 175 chr2R 6696565 5` UTR Mob4 - chr2R 6696652 5` UTR Mob4 - chr2R 6696740 5` UTR Rab2 + chr2R_28_6695001 chr2R_6695001 RAL-850 855 chr2R 6699556 6699606 chr2R 6699691 6699741 18 135 8.0 8.0 8.0 2.0 185 chr2R 6699556 intergenic Rab2 + chr2R 6699648 intergenic Rab2 + chr2R 6699741 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_18_6695001 chr2R_6695001 RAL-850 856 chr2R 6710716 6710729 chr2R 6710959 6710972 6 243 0.0 15.5 7.8 0.7 256 chr2R 6710716 intron,intron CG3409 -,CG45092 - chr2R 6710844 intron,intron CG3409 -,CG45092 - chr2R 6710972 intron,intron CG3409 -,CG45092 - chr2R_6_6710001 chr2R_6710001 RAL-850 857 chr2R 6712541 6712598 chr2R 6712688 6712745 31 146 14.0 14.0 14.0 2.1 204 chr2R 6712541 intron,intron CG3409 -,CG45092 - chr2R 6712643 intron,intron CG3409 -,CG45092 - chr2R 6712745 intron,intron CG3409 -,CG45092 - chr2R_31_6710001 chr2R_6710001 RAL-850 858 chr2R 6952125 6952141 chr2R 6959755 6959771 opus 6 7630 18.5 7.0 12.8 0.4 7646 chr2R 6952125 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955948 intron,intron mim -,CheB42c - chr2R 6959771 intron,intron mim -,CheB42c - chr2R_6_6955001 chr2R_6955001 RAL-850 859 chr2R 6952146 6952182 chr2R 6959750 6959812 opus 16 7628 10.0 6.5 8.2 1.7 7666 chr2R 6952146 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955979 intron,intron mim -,CheB42c - chr2R 6959812 intron,intron mim -,CheB42c - chr2R_16_6955001 chr2R_6955001 RAL-850 860 chr2R 6978593 6978658 chr2R 6978826 6978891 25 232 9.5 10.5 10.0 2.3 298 chr2R 6978593 exon vimar - chr2R 6978742 intron vimar - chr2R 6978891 intron vimar - chr2R_25_6975001 chr2R_6975001 RAL-850 861 chr2R 7139858 7139946 chr2R 7141412 7141456 hopper2 7 1545 1.5 7.5 4.5 1.3 1598 chr2R 7139858 intergenic not near genes chr2R 7140657 intergenic not near genes chr2R 7141456 intergenic not near genes chr2R_7_7140001 chr2R_7140001 RAL-850 862 chr2R 7153114 7153192 chr2R 7153250 7153280 38 131 5.0 9.0 7.0 4.8 166 chr2R 7153114 intron,exon pk +,Spn43Ab - chr2R 7153197 intron,intron pk +,Spn43Ab - chr2R 7153280 intron,intron pk +,Spn43Ab - chr2R_38_7150001 chr2R_7150001 RAL-850 863 chr2R 7196531 7196587 chr2R 7201356 7201412 F-element 17 4825 8.0 7.0 7.5 2.0 4881 chr2R 7196531 intron pk + chr2R 7198972 intron pk + chr2R 7201412 intron pk + chr2R_17_7195001 chr2R_7195001 RAL-850 864 chr2R 7209845 7209867 chr2R 7217643 7217665 roo 17 7798 8.0 26.0 17.0 0.9 7820 chr2R 7209845 intron pk + chr2R 7213755 intron pk + chr2R 7217665 intron pk + chr2R_17_7210001 chr2R_7210001 RAL-850 865 chr2R 7235776 7235836 chr2R 7240918 7240942 jockey 22 5137 13.0 5.0 9.0 2.2 5166 chr2R 7235776 intergenic not near genes chr2R 7238359 intergenic not near genes chr2R 7240942 intergenic not near genes chr2R_22_7235001 chr2R_7235001 RAL-850 866 chr2R 7235840 7235847 chr2R 7240912 7240934 jockey 4 5094 10.0 4.5 7.2 0.5 5094 chr2R 7235840 intergenic not near genes chr2R 7238387 intergenic not near genes chr2R 7240934 intergenic not near genes chr2R_4_7235001 chr2R_7235001 RAL-850 867 chr2R 7254763 7254780 chr2R 7254928 7254931 4 159 33.0 10.5 21.8 0.2 168 chr2R 7254763 5` UTR CR45280 + chr2R 7254847 5` UTR CR45280 + chr2R 7254931 5` UTR CR45280 + chr2R_4_7250001 chr2R_7250001 RAL-850 868 chr2R 7254791 7254836 chr2R 7254921 7254985 29 153 12.5 10.0 11.2 2.4 194 chr2R 7254791 5` UTR CR45280 + chr2R 7254888 5` UTR CR45280 + chr2R 7254985 5` UTR CR45280 + chr2R_29_7250001 chr2R_7250001 RAL-850 869 chr2R 7272208 7272271 chr2R 7272350 7272403 9 138 1.5 7.5 4.5 1.6 195 chr2R 7272208 intergenic Br140 - chr2R 7272306 3` UTR Br140 - chr2R 7272403 3` UTR Br140 - chr2R_9_7270001 chr2R_7270001 RAL-850 870 chr2R 7290139 7290215 chr2R 7290291 7290367 28 152 7.5 5.0 6.2 3.9 228 chr2R 7290139 intron pwn + chr2R 7290253 intron pwn + chr2R 7290367 intron pwn + chr2R_28_7290001 chr2R_7290001 RAL-850 871 chr2R 7310722 7310796 chr2R 7310854 7310906 25 129 14.5 13.5 14.0 1.7 184 chr2R 7310722 intergenic not near genes chr2R 7310814 intergenic not near genes chr2R 7310906 intergenic CG12164 + chr2R_25_7310001 chr2R_7310001 RAL-850 872 chr2R 7389527 7389593 chr2R 7389679 7389745 38 150 11.5 9.5 10.5 3.3 218 chr2R 7389527 intron CG11107 + chr2R 7389636 intron CG11107 + chr2R 7389745 intron CG11107 + chr2R_38_7385001 chr2R_7385001 RAL-850 873 chr2R 7417854 7418152 chr2R 7417990 7418281 46 130 10.5 11.0 10.8 3.9 427 chr2R 7417854 intergenic not near genes chr2R 7418068 intergenic not near genes chr2R 7418281 intergenic not near genes chr2R_46_7415001 chr2R_7415001 RAL-850 874 chr2R 7418161 7418168 chr2R 7418290 7418297 5 128 8.5 24.0 16.2 0.3 136 chr2R 7418161 intergenic not near genes chr2R 7418229 intergenic not near genes chr2R 7418297 intergenic not near genes chr2R_5_7415001 chr2R_7415001 RAL-850 875 chr2R 7434856 7434898 chr2R 7439207 7439249 Juan 18 4351 12.0 19.0 15.5 1.1 4393 chr2R 7434856 3` UTR so + chr2R 7437052 intergenic not near genes chr2R 7439249 intergenic not near genes chr2R_18_7435001 chr2R_7435001 RAL-850 876 chr2R 7608366 7608425 chr2R 7613619 7613676 I-element 28 5251 8.5 9.5 9.0 2.8 5310 chr2R 7608366 intron CG1358 - chr2R 7611021 intron CG1358 - chr2R 7613676 intron CG1358 - chr2R_28_7610001 chr2R_7610001 RAL-850 877 chr2R 7623768 7623780 chr2R 7624005 7624009 9 236 19.0 8.5 13.8 0.6 241 chr2R 7623768 intron CG43340 + chr2R 7623888 intron CG43340 + chr2R 7624009 intron CG43340 + chr2R_9_7620001 chr2R_7620001 RAL-850 878 chr2R 7623781 7623837 chr2R 7624002 7624074 31 235 6.0 7.5 6.8 4.0 293 chr2R 7623781 intron CG43340 + chr2R 7623928 intron CG43340 + chr2R 7624074 intron CG43340 + chr2R_31_7620001 chr2R_7620001 RAL-850 879 chr2R 7691964 7692035 chr2R 7692095 7692166 21 130 8.0 10.5 9.2 2.1 202 chr2R 7691964 intron CG1399 - chr2R 7692065 intron CG1399 - chr2R 7692166 intron CG1399 - chr2R_21_7690001 chr2R_7690001 RAL-850 880 chr2R 7694528 7694608 chr2R 7694661 7694742 25 128 9.5 9.5 9.5 2.4 214 chr2R 7694528 intron CG1399 - chr2R 7694635 intron CG1399 - chr2R 7694742 intron CG1399 - chr2R_25_7690001 chr2R_7690001 RAL-850 881 chr2R 7708299 7708377 chr2R 7708447 7708525 26 147 9.0 9.0 9.0 2.6 226 chr2R 7708299 exon tor - chr2R 7708412 intron tor - chr2R 7708525 exon tor - chr2R_26_7705001 chr2R_7705001 RAL-850 882 chr2R 7714042 7714115 chr2R 7714168 7714248 19 131 9.0 8.5 8.8 1.9 206 chr2R 7714042 exon CG1942 + chr2R 7714145 3` UTR CG1942 + chr2R 7714248 intergenic CG1942 + chr2R_19_7710001 chr2R_7710001 RAL-850 883 chr2R 7730057 7730092 chr2R 7730172 7730222 19 125 10.5 6.0 8.2 2.1 165 chr2R 7730057 intron CG18812 - chr2R 7730140 intron CG18812 - chr2R 7730222 intron CG18812 - chr2R_19_7730001 chr2R_7730001 RAL-850 884 chr2R 7730096 7730119 chr2R 7730225 7730249 6 130 7.0 14.0 10.5 0.5 153 chr2R 7730096 intron CG18812 - chr2R 7730172 intron CG18812 - chr2R 7730249 intron CG18812 - chr2R_6_7730001 chr2R_7730001 RAL-850 885 chr2R 7737863 7737905 chr2R 7737992 7738034 19 129 15.0 14.5 14.8 1.2 171 chr2R 7737863 intergenic not near genes chr2R 7737948 intergenic not near genes chr2R 7738034 intergenic not near genes chr2R_19_7735001 chr2R_7735001 RAL-850 886 chr2R 7815632 7815691 chr2R 7822149 7822210 Burdock 20 6519 12.0 6.0 9.0 2.0 6578 chr2R 7815632 intergenic CG1882 + chr2R 7818921 intergenic not near genes chr2R 7822210 3` UTR cathD - chr2R_20_7815001 chr2R_7815001 RAL-850 887 chr2R 7869148 7869207 chr2R 7873984 7874043 Doc 22 4835 9.5 15.5 12.5 1.6 4895 chr2R 7869148 intron Dgk - chr2R 7871596 intron Dgk - chr2R 7874043 intron Dgk - chr2R_22_7870001 chr2R_7870001 RAL-850 888 chr2R 7875472 7875516 chr2R 7875626 7875670 13 154 9.5 11.5 10.5 1.1 198 chr2R 7875472 intron Dgk - chr2R 7875571 intron Dgk - chr2R 7875670 intron Dgk - chr2R_13_7875001 chr2R_7875001 RAL-850 889 chr2R 7897136 7897149 chr2R 7897275 7897284 9 137 0.0 26.5 13.2 0.6 148 chr2R 7897136 intron CG30377 + chr2R 7897210 intron CG30377 + chr2R 7897284 intron CG30377 + chr2R_9_7895001 chr2R_7895001 RAL-850 890 chr2R 7920833 7920851 chr2R 7922356 7922374 7 1523 57.5 66.5 62.0 0.1 1541 chr2R 7920833 3` UTR Cul1 + chr2R 7921604 intron Or43b - chr2R 7922374 exon Or43b - chr2R_7_7920001 chr2R_7920001 RAL-850 891 chr2R 7920831 7920853 chr2R 7922377 7922434 33 1528 58.0 61.5 59.8 0.5 1603 chr2R 7920831 3` UTR Cul1 + chr2R 7921632 intron Or43b - chr2R 7922434 exon Or43b - chr2R_33_7920001 chr2R_7920001 RAL-850 892 chr2R 7926877 7926939 chr2R 7927003 7927065 14 126 6.0 7.0 6.5 1.9 188 chr2R 7926877 intron CG8791 + chr2R 7926971 intron CG8791 + chr2R 7927065 intron CG8791 + chr2R_14_7925001 chr2R_7925001 RAL-850 893 chr2R 7997391 7997456 chr2R 7997547 7997612 35 155 3.0 8.5 5.8 5.1 221 chr2R 7997391 exon Hey - chr2R 7997502 intron Hey - chr2R 7997612 intron Hey - chr2R_35_7995001 chr2R_7995001 RAL-850 894 chr2R 8015621 8015666 chr2R 8017693 8017720 14 2066 14.0 3.5 8.8 1.4 2099 chr2R 8015621 intergenic mir-4981 + chr2R 8016670 intergenic not near genes chr2R 8017720 intergenic not near genes chr2R_14_8015001 chr2R_8015001 RAL-850 895 chr2R 8089205 8089278 chr2R 8089341 8089414 23 136 12.5 11.0 11.8 1.8 209 chr2R 8089205 exon sut2 + chr2R 8089310 intergenic sut2 +,sut3 + chr2R 8089414 intergenic sut3 +,sut2 + chr2R_23_8085001 chr2R_8085001 RAL-850 896 chr2R 8105894 8105959 chr2R 8106035 8106100 23 140 6.0 11.0 8.5 2.4 206 chr2R 8105894 5` UTR Cul4 - chr2R 8105997 intron Cul4 - chr2R 8106100 5` UTR Cul4 - chr2R_23_8105001 chr2R_8105001 RAL-850 897 chr2R 8160885 8160938 chr2R 8161025 8161068 1360 24 138 12.5 24.0 18.2 1.2 183 chr2R 8160885 exon CG8708 - chr2R 8160976 intron CG8708 - chr2R 8161068 intron CG8708 - chr2R_24_8160001 chr2R_8160001 RAL-850 898 chr2R 8203709 8203775 chr2R 8203851 8203913 16 142 5.5 4.5 5.0 2.7 204 chr2R 8203709 intron LRP1 + chr2R 8203811 intron LRP1 + chr2R 8203913 intron LRP1 + chr2R_16_8200001 chr2R_8200001 RAL-850 899 chr2R 8249522 8249573 chr2R 8249654 8249705 18 131 15.5 14.0 14.8 1.1 183 chr2R 8249522 5` UTR CG44439 - chr2R 8249614 intergenic CG44439 - chr2R 8249705 intergenic CG44439 - chr2R_18_8245001 chr2R_8245001 RAL-850 900 chr2R 8249576 8249807 chr2R 8249652 8249941 16 133 13.0 14.5 13.8 1.1 365 chr2R 8249576 5` UTR CG44439 - chr2R 8249758 intergenic CG44439 - chr2R 8249941 intergenic CG44439 - chr2R_16_8245001 chr2R_8245001 RAL-850 901 chr2R 8249815 8249845 chr2R 8249958 8249989 6 144 8.0 14.0 11.0 0.5 174 chr2R 8249815 intergenic CG44439 - chr2R 8249902 intergenic CG44439 - chr2R 8249989 intergenic CG44439 - chr2R_6_8245001 chr2R_8245001 RAL-850 902 chr2R 8266532 8266564 chr2R 8266664 8266709 11 131 10.5 7.0 8.8 1.1 177 chr2R 8266532 intron CG30375 - chr2R 8266620 exon CG30375 - chr2R 8266709 exon CG30375 - chr2R_11_8265001 chr2R_8265001 RAL-850 903 chr2R 8277591 8277601 chr2R 8277734 8277746 4 144 28.5 11.0 19.8 0.2 155 chr2R 8277591 5` UTR CR44280 + chr2R 8277668 5` UTR CR44280 + chr2R 8277746 5` UTR CR44280 + chr2R_4_8275001 chr2R_8275001 RAL-850 904 chr2R 8277603 8277667 chr2R 8277732 8277775 34 128 9.0 10.0 9.5 3.2 172 chr2R 8277603 5` UTR CR44280 + chr2R 8277689 5` UTR CR44280 + chr2R 8277775 5` UTR CR44280 + chr2R_34_8275001 chr2R_8275001 RAL-850 905 chr2R 8330825 8330882 chr2R 8331361 8331418 roo 25 536 7.0 12.0 9.5 2.4 593 chr2R 8330825 intron pdm3 + chr2R 8331122 intron pdm3 + chr2R 8331418 intron pdm3 + chr2R_25_8330001 chr2R_8330001 RAL-850 906 chr2R 8398168 8398209 chr2R 8402999 8403011 Doc 14 4826 15.5 10.5 13.0 1.0 4843 chr2R 8398168 intron CG2121 - chr2R 8400590 intron CG2121 - chr2R 8403011 intron CG2121 - chr2R_14_8400001 chr2R_8400001 RAL-850 907 chr2R 8398213 8398235 chr2R 8402997 8403066 Doc 12 4825 10.0 10.0 10.0 1.1 4853 chr2R 8398213 intron CG2121 - chr2R 8400640 intron CG2121 - chr2R 8403066 intron CG2121 - chr2R_12_8400001 chr2R_8400001 RAL-850 908 chr2R 8416267 8416276 chr2R 8417141 8417150 I-element 4 874 16.0 11.5 13.8 0.3 883 chr2R 8416267 intergenic not near genes chr2R 8416708 intergenic CG43296 - chr2R 8417150 intergenic CG43296 - chr2R_4_8415001 chr2R_8415001 RAL-850 909 chr2R 8454937 8454999 chr2R 8455830 8455893 24 893 74.5 58.5 66.5 0.4 956 chr2R 8454937 exon Mal-A2 + chr2R 8455415 exon Mal-A2 + chr2R 8455893 intergenic Mal-A3 -,Mal-A2 + chr2R_24_8455001 chr2R_8455001 RAL-850 910 chr2R 8470458 8470488 chr2R 8472490 8472521 10 2040 60.5 94.5 77.5 0.1 2063 chr2R 8470458 exon Mal-A7 - chr2R 8471490 exon Mal-A7 - chr2R 8472521 exon Mal-A8 + chr2R_10_8470001 chr2R_8470001 RAL-850 911 chr2R 8470450 8470463 chr2R 8472541 8472565 20 2078 53.5 80.0 66.8 0.3 2115 chr2R 8470450 exon Mal-A7 - chr2R 8471508 exon Mal-A7 - chr2R 8472565 exon Mal-A8 + chr2R_20_8470001 chr2R_8470001 RAL-850 912 chr2R 8480903 8480955 chr2R 8481077 8481129 18 174 6.0 5.0 5.5 2.8 226 chr2R 8480903 intron mtt - chr2R 8481016 intron mtt - chr2R 8481129 intron mtt - chr2R_18_8480001 chr2R_8480001 RAL-850 913 chr2R 8483919 8483989 chr2R 8484045 8484115 31 125 9.0 7.5 8.2 3.4 196 chr2R 8483919 intron mtt - chr2R 8484017 intron mtt - chr2R 8484115 intron mtt - chr2R_31_8480001 chr2R_8480001 RAL-850 914 chr2R 8490562 8490571 chr2R 8492337 8492346 Rt1c 4 1775 22.0 15.0 18.5 0.2 1784 chr2R 8490562 intron mtt - chr2R 8491454 intron mtt - chr2R 8492346 intron mtt - chr2R_4_8490001 chr2R_8490001 RAL-850 915 chr2R 8566016 8566064 chr2R 8567012 8567060 1360 19 994 6.5 17.5 12.0 1.5 1044 chr2R 8566016 5` UTR Cyp6a14 - chr2R 8566538 5` UTR Cyp6a14 - chr2R 8567060 5` UTR Cyp6a14 - chr2R_19_8565001 chr2R_8565001 RAL-850 916 chr2R 8636848 8636920 chr2R 8636983 8637057 27 135 6.5 7.0 6.8 3.5 209 chr2R 8636848 intergenic not near genes chr2R 8636952 intergenic not near genes chr2R 8637057 intergenic not near genes chr2R_27_8635001 chr2R_8635001 RAL-850 917 chr2R 8658215 8658255 chr2R 8658319 8658336 11 112 2.0 6.5 4.2 2.1 121 chr2R 8658215 intron ptc + chr2R 8658276 intron ptc + chr2R 8658336 intron ptc + chr2R_11_8655001 chr2R_8655001 RAL-850 918 chr2R 8722719 8722732 chr2R 8723010 8723020 pogo 6 290 17.5 11.5 14.5 0.4 301 chr2R 8722719 intron CG14767 - chr2R 8722870 intron CG14767 - chr2R 8723020 intron CG14767 - chr2R_6_8720001 chr2R_8720001 RAL-850 919 chr2R 8722734 8722789 chr2R 8723008 8723049 pogo 39 280 5.5 11.0 8.2 4.2 315 chr2R 8722734 intron CG14767 - chr2R 8722892 intron CG14767 - chr2R 8723049 intron CG14767 - chr2R_39_8720001 chr2R_8720001 RAL-850 920 chr2R 8759715 8759789 chr2R 8759844 8759906 23 125 5.5 5.5 5.5 3.5 191 chr2R 8759715 intergenic CG8740 + chr2R 8759810 intergenic CG8740 + chr2R 8759906 intergenic CG8740 + chr2R_23_8755001 chr2R_8755001 RAL-850 921 chr2R 8777874 8777945 chr2R 8784128 8784199 diver 20 6253 4.0 8.5 6.2 2.8 6325 chr2R 8777874 intergenic not near genes chr2R 8781036 intergenic not near genes chr2R 8784199 intergenic not near genes chr2R_20_8780001 chr2R_8780001 RAL-850 922 chr2R 8805318 8805345 chr2R 8805642 8805669 13 324 0.0 15.5 7.8 1.5 351 chr2R 8805318 intron sns + chr2R 8805494 intron sns + chr2R 8805669 intron sns + chr2R_13_8805001 chr2R_8805001 RAL-850 923 chr2R 8859616 8859641 chr2R 8859746 8859771 9 129 11.0 14.0 12.5 0.7 155 chr2R 8859616 intergenic not near genes chr2R 8859694 intergenic not near genes chr2R 8859771 intergenic not near genes chr2R_9_8855001 chr2R_8855001 RAL-850 924 chr2R 8859645 8859667 chr2R 8859740 8859787 11 114 5.5 11.5 8.5 1.2 142 chr2R 8859645 intergenic not near genes chr2R 8859716 intergenic not near genes chr2R 8859787 intergenic not near genes chr2R_11_8855001 chr2R_8855001 RAL-850 925 chr2R 8941523 8941588 chr2R 8941659 8941717 31 138 6.5 8.0 7.2 3.8 194 chr2R 8941523 intergenic CR44273 +,CG13748 + chr2R 8941620 5` UTR CR44273 + chr2R 8941717 5` UTR CR44273 + chr2R_31_8940001 chr2R_8940001 RAL-850 926 chr2R 8967087 8967141 chr2R 8967227 8967269 29 138 12.0 11.0 11.5 2.3 182 chr2R 8967087 intron CG8216 - chr2R 8967178 intron CG8216 - chr2R 8967269 intron CG8216 - chr2R_29_8965001 chr2R_8965001 RAL-850 927 chr2R 9047371 9047434 chr2R 9047516 9047579 21 145 3.5 6.5 5.0 3.5 208 chr2R 9047371 intron CG13743 - chr2R 9047475 intron CG13743 - chr2R 9047579 intron CG13743 - chr2R_21_9045001 chr2R_9045001 RAL-850 928 chr2R 9055803 9055936 chr2R 9055938 9056105 10 176 0.0 0.0 0.0 10.0 302 chr2R 9055803 intron CG13743 - chr2R 9055954 intron CG13743 - chr2R 9056105 intron CG13743 - chr2R_10_9055001 chr2R_9055001 RAL-850 929 chr2R 9151261 9151319 chr2R 9157781 9157839 Burdock 17 6520 14.5 10.0 12.2 1.3 6578 chr2R 9151261 exon CG30345 + chr2R 9154550 intergenic not near genes chr2R 9157839 intergenic CG8008 - chr2R_17_9150001 chr2R_9150001 RAL-850 930 chr2R 9183084 9183160 chr2R 9183216 9183292 30 131 7.5 10.0 8.8 3.1 208 chr2R 9183084 intron ltd - chr2R 9183188 intron ltd - chr2R 9183292 intron ltd - chr2R_30_9180001 chr2R_9180001 RAL-850 931 chr2R 9198510 9198575 chr2R 9198642 9198714 13 133 8.5 0.0 4.2 2.5 204 chr2R 9198510 intron unpg + chr2R 9198612 intron unpg + chr2R 9198714 intron unpg + chr2R_13_9195001 chr2R_9195001 RAL-850 932 chr2R 9212659 9212703 chr2R 9213195 9213220 roo 13 534 13.0 5.0 9.0 1.3 561 chr2R 9212659 intergenic CR45309 + chr2R 9212940 intergenic CR45309 + chr2R 9213220 5` UTR CR45309 + chr2R_13_9210001 chr2R_9210001 RAL-850 933 chr2R 9213214 9213223 chr2R 9213336 9213350 5 126 6.0 23.0 14.5 0.3 136 chr2R 9213214 5` UTR CR45309 + chr2R 9213282 5` UTR CR45309 + chr2R 9213350 5` UTR CR45309 + chr2R_5_9210001 chr2R_9210001 RAL-850 934 chr2R 9213224 9213225 chr2R 9213335 9213342 4 116 6.0 23.0 14.5 0.3 118 chr2R 9213224 5` UTR CR45309 + chr2R 9213283 5` UTR CR45309 + chr2R 9213342 5` UTR CR45309 + chr2R_4_9210001 chr2R_9210001 RAL-850 935 chr2R 9216992 9217014 chr2R 9217087 9217108 4 101 11.0 10.5 10.8 0.3 116 chr2R 9216992 intergenic not near genes chr2R 9217050 intergenic not near genes chr2R 9217108 intergenic not near genes chr2R_4_9215001 chr2R_9215001 RAL-850 936 chr2R 9325463 9325492 chr2R 9325607 9325636 5 144 0.0 7.0 3.5 1.1 173 chr2R 9325463 intron,intron CG13739 -,CG13954 - chr2R 9325550 intron,intron CG13739 -,CG13954 - chr2R 9325636 intron,intron CG13739 -,CG13954 - chr2R_5_9325001 chr2R_9325001 RAL-850 937 chr2R 9368076 9368133 chr2R 9368202 9368211 13 105 12.5 1.5 7.0 1.6 135 chr2R 9368076 intron CG13954 - chr2R 9368144 intron CG13954 - chr2R 9368211 intron CG13954 - chr2R_13_9365001 chr2R_9365001 RAL-850 938 chr2R 9378065 9378085 chr2R 9378197 9378217 13 130 16.5 10.5 13.5 0.9 152 chr2R 9378065 intron CG13954 - chr2R 9378141 intron CG13954 - chr2R 9378217 intron CG13954 - chr2R_13_9375001 chr2R_9375001 RAL-850 939 chr2R 9378088 9378139 chr2R 9378192 9378271 42 126 7.5 11.0 9.2 4.1 183 chr2R 9378088 intron CG13954 - chr2R 9378180 intron CG13954 - chr2R 9378271 intron CG13954 - chr2R_42_9375001 chr2R_9375001 RAL-850 940 chr2R 9415815 9415884 chr2R 9415951 9416020 35 136 5.0 12.5 8.8 3.6 205 chr2R 9415815 intron wun2 + chr2R 9415918 intron wun2 + chr2R 9416020 intron wun2 + chr2R_35_9415001 chr2R_9415001 RAL-850 941 chr2R 9480040 9480074 chr2R 9490621 9490655 roo 14 10580 11.5 6.0 8.8 1.4 10615 chr2R 9480040 intergenic not near genes chr2R 9485348 intergenic not near genes chr2R 9490655 intergenic not near genes chr2R_14_9485001 chr2R_9485001 RAL-850 942 chr2R 9509413 9509450 chr2R 9509527 9509548 10 116 13.0 16.0 14.5 0.6 135 chr2R 9509413 intron brp + chr2R 9509480 intron brp + chr2R 9509548 intron brp + chr2R_10_9505001 chr2R_9505001 RAL-850 943 chr2R 9510614 9510696 chr2R 9510780 9510862 17 164 6.0 6.0 6.0 2.4 248 chr2R 9510614 exon brp + chr2R 9510738 intron brp + chr2R 9510862 exon brp + chr2R_17_9510001 chr2R_9510001 RAL-850 944 chr2R 9561797 9561839 chr2R 9561934 9561977 8 138 5.0 8.5 6.8 1.0 180 chr2R 9561797 3` UTR,intron CR45281 -,CG1809 + chr2R 9561887 3` UTR,intron CR45281 -,CG1809 + chr2R 9561977 3` UTR,intron CR45281 -,CG1809 + chr2R_8_9560001 chr2R_9560001 RAL-850 945 chr2R 9616594 9616642 chr2R 9616749 9616797 17 154 12.0 8.0 10.0 1.5 203 chr2R 9616594 intron Mmp2 - chr2R 9616696 intron Mmp2 - chr2R 9616797 intron Mmp2 - chr2R_17_9615001 chr2R_9615001 RAL-850 946 chr2R 9621815 9621835 chr2R 9621943 9621968 12 132 17.5 10.5 14.0 0.8 153 chr2R 9621815 intron Mmp2 - chr2R 9621892 intron Mmp2 - chr2R 9621968 intron Mmp2 - chr2R_12_9620001 chr2R_9620001 RAL-850 947 chr2R 9621836 9621877 chr2R 9621934 9622005 21 122 6.5 8.0 7.2 2.6 169 chr2R 9621836 intron Mmp2 - chr2R 9621920 intron Mmp2 - chr2R 9622005 intron Mmp2 - chr2R_21_9620001 chr2R_9620001 RAL-850 948 chr2R 9676623 9676681 chr2R 9676775 9676833 33 158 9.5 12.5 11.0 2.8 210 chr2R 9676623 intron Mmp2 - chr2R 9676728 intron Mmp2 - chr2R 9676833 intron Mmp2 - chr2R_33_9675001 chr2R_9675001 RAL-850 949 chr2R 9701737 9701784 chr2R 9701864 9701911 14 127 0.0 14.5 7.2 1.7 174 chr2R 9701737 intergenic not near genes chr2R 9701824 intergenic not near genes chr2R 9701911 intergenic not near genes chr2R_14_9700001 chr2R_9700001 RAL-850 950 chr2R 9726573 9726629 chr2R 9734176 9734232 17.6 10 7603 10.0 7.5 8.8 1.0 7659 chr2R 9726573 intron sqa - chr2R 9730402 intron sqa - chr2R 9734232 intron sqa - chr2R_10_9730001 chr2R_9730001 RAL-850 951 chr2R 9761257 9761298 chr2R 9761383 9761424 18 126 7.5 18.0 12.8 1.3 167 chr2R 9761257 intron trpl + chr2R 9761340 intron trpl + chr2R 9761424 exon trpl + chr2R_18_9760001 chr2R_9760001 RAL-850 952 chr2R 9871023 9871060 chr2R 9871544 9871556 roo 16 529 0.5 9.0 4.8 2.8 533 chr2R 9871023 intron cbx - chr2R 9871290 intron cbx - chr2R 9871556 intron,5` UTR cbx -,CG18446 + chr2R_16_9870001 chr2R_9870001 RAL-850 953 chr2R 9871062 9871072 chr2R 9871543 9871548 roo 10 515 0.5 9.0 4.8 1.7 486 chr2R 9871062 intron cbx - chr2R 9871305 intron cbx - chr2R 9871548 intron,5` UTR cbx -,CG18446 + chr2R_10_9870001 chr2R_9870001 RAL-850 954 chr2R 9921163 9921169 chr2R 9921343 9921347 4 180 7.0 13.0 10.0 0.4 184 chr2R 9921163 intron Mef2 - chr2R 9921255 intron Mef2 - chr2R 9921347 intron Mef2 - chr2R_4_9920001 chr2R_9920001 RAL-850 955 chr2R 9945403 9945464 chr2R 9945649 9945710 BS 23 245 8.0 6.0 7.0 2.9 307 chr2R 9945403 intron Mef2 - chr2R 9945556 intron Mef2 - chr2R 9945710 intron Mef2 - chr2R_23_9945001 chr2R_9945001 RAL-850 956 chr2R 9998022 9998088 chr2R 9998166 9998232 8 143 4.5 4.0 4.2 1.5 210 chr2R 9998022 intron Pka-R2 - chr2R 9998127 intron Pka-R2 - chr2R 9998232 intron Pka-R2 - chr2R_8_9995001 chr2R_9995001 RAL-850 957 chr2R 10005510 10005582 chr2R 10005657 10005729 22 147 7.5 10.5 9.0 2.2 219 chr2R 10005510 intron Pka-R2 - chr2R 10005620 intron Pka-R2 - chr2R 10005729 intron Pka-R2 - chr2R_22_10005001 chr2R_10005001 RAL-850 958 chr2R 10005807 10005814 chr2R 10007022 10007029 1360 4 1215 20.5 12.0 16.2 0.2 1222 chr2R 10005807 intron Pka-R2 - chr2R 10006418 intron Pka-R2 - chr2R 10007029 intron Pka-R2 - chr2R_4_10005001 chr2R_10005001 RAL-850 959 chr2R 10005817 10005832 chr2R 10007017 10007039 1360 13 1212 18.5 10.5 14.5 0.8 1222 chr2R 10005817 intron Pka-R2 - chr2R 10006428 intron Pka-R2 - chr2R 10007039 intron Pka-R2 - chr2R_13_10005001 chr2R_10005001 RAL-850 960 chr2R 10005839 10005878 chr2R 10007014 10007068 1360 19 1199 8.0 10.0 9.0 1.9 1229 chr2R 10005839 intron Pka-R2 - chr2R 10006454 intron Pka-R2 - chr2R 10007068 intron Pka-R2 - chr2R_19_10005001 chr2R_10005001 RAL-850 961 chr2R 10034839 10034909 chr2R 10034967 10035037 22 128 10.0 6.5 8.2 2.4 198 chr2R 10034839 3` UTR oys - chr2R 10034938 3` UTR oys - chr2R 10035037 3` UTR oys - chr2R_22_10030001 chr2R_10030001 RAL-850 962 chr2R 10047782 10047831 chr2R 10047915 10047964 10 133 7.0 14.0 10.5 0.9 182 chr2R 10047782 intron oys - chr2R 10047873 intron oys - chr2R 10047964 intron oys - chr2R_10_10045001 chr2R_10045001 RAL-850 963 chr2R 10088978 10088994 chr2R 10089105 10089121 7 126 0.0 16.5 8.2 0.8 143 chr2R 10088978 intron CG2269 + chr2R 10089050 intron CG2269 + chr2R 10089121 intron CG2269 + chr2R_7_10085001 chr2R_10085001 RAL-850 964 chr2R 10132140 10132208 chr2R 10132270 10132339 13 130 6.5 5.5 6.0 1.9 199 chr2R 10132140 exon gem + chr2R 10132240 intron gem + chr2R 10132339 exon gem + chr2R_13_10130001 chr2R_10130001 RAL-850 965 chr2R 10147604 10147670 chr2R 10147737 10147803 19 133 5.5 8.0 6.8 2.4 199 chr2R 10147604 intron KCNQ - chr2R 10147704 intron KCNQ - chr2R 10147803 intron KCNQ - chr2R_19_10145001 chr2R_10145001 RAL-850 966 chr2R 10160499 10160566 chr2R 10160637 10160704 35 138 8.5 11.0 9.8 3.2 205 chr2R 10160499 intron KCNQ - chr2R 10160602 intron KCNQ - chr2R 10160704 intron KCNQ - chr2R_35_10160001 chr2R_10160001 RAL-850 967 chr2R 10168310 10168365 chr2R 10168437 10168492 10 123 11.5 15.5 13.5 0.7 182 chr2R 10168310 intron KCNQ - chr2R 10168401 intron KCNQ - chr2R 10168492 intron KCNQ - chr2R_10_10165001 chr2R_10165001 RAL-850 968 chr2R 10176840 10176904 chr2R 10186052 10186121 roo 34 9216 8.0 10.0 9.0 3.4 9281 chr2R 10176840 intron KCNQ - chr2R 10181480 intron KCNQ - chr2R 10186121 intron KCNQ - chr2R_34_10180001 chr2R_10180001 RAL-850 969 chr2R 10216140 10216209 chr2R 10216268 10216284 20 123 10.5 8.0 9.2 2.0 144 chr2R 10216140 intron,intron CG12912 -,Hr46 - chr2R 10216212 intron,intron CG12912 -,Hr46 - chr2R 10216284 intron,intron CG12912 -,Hr46 - chr2R_20_10215001 chr2R_10215001 RAL-850 970 chr2R 10266450 10266528 chr2R 10266591 10266640 19 118 8.5 9.0 8.8 1.9 190 chr2R 10266450 intron CG12910 + chr2R 10266545 intron CG12910 + chr2R 10266640 intron CG12910 + chr2R_19_10265001 chr2R_10265001 RAL-850 971 chr2R 10274776 10274816 chr2R 10274902 10274927 17 125 11.0 0.0 5.5 2.6 151 chr2R 10274776 intron CAP + chr2R 10274852 intron CAP + chr2R 10274927 intron CAP + chr2R_17_10270001 chr2R_10270001 RAL-850 972 chr2R 10290070 10290141 chr2R 10290201 10290272 24 131 6.0 7.5 6.8 3.1 202 chr2R 10290070 intron CAP + chr2R 10290171 intron CAP + chr2R 10290272 intron CAP + chr2R_24_10290001 chr2R_10290001 RAL-850 973 chr2R 10313288 10313348 chr2R 10313426 10313468 24 137 1.5 8.5 5.0 4.0 180 chr2R 10313288 intergenic not near genes chr2R 10313378 intergenic not near genes chr2R 10313468 intergenic Ndg + chr2R_24_10310001 chr2R_10310001 RAL-850 974 chr2R 10319654 10319692 chr2R 10319801 10319840 6 147 2.5 7.5 5.0 1.0 186 chr2R 10319654 exon Ndg + chr2R 10319747 intron Ndg + chr2R 10319840 intron Ndg + chr2R_6_10315001 chr2R_10315001 RAL-850 975 chr2R 10322055 10322081 chr2R 10322187 10322213 7 132 6.5 10.0 8.2 0.8 158 chr2R 10322055 3` UTR Ndg + chr2R 10322134 intergenic Ndg + chr2R 10322213 intergenic Ndg + chr2R_7_10320001 chr2R_10320001 RAL-850 976 chr2R 10352270 10352275 chr2R 10352404 10352409 6 134 0.0 21.5 10.8 0.5 139 chr2R 10352270 intron CG42732 - chr2R 10352340 intron CG42732 - chr2R 10352409 intron CG42732 - chr2R_6_10350001 chr2R_10350001 RAL-850 977 chr2R 10352627 10352703 chr2R 10352754 10352823 29 125 8.5 7.5 8.0 3.2 196 chr2R 10352627 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352725 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352823 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_29_10350001 chr2R_10350001 RAL-850 978 chr2R 10387984 10387998 chr2R 10388099 10388130 6 138 0.0 9.0 4.5 1.1 146 chr2R 10387984 intron CG42732 - chr2R 10388057 intron CG42732 - chr2R 10388130 intron CG42732 - chr2R_6_10385001 chr2R_10385001 RAL-850 979 chr2R 10404063 10404134 chr2R 10404219 10404290 38 156 6.5 5.0 5.8 5.6 227 chr2R 10404063 intron CG42732 - chr2R 10404176 intron CG42732 - chr2R 10404290 intron CG42732 - chr2R_38_10400001 chr2R_10400001 RAL-850 980 chr2R 10411758 10411837 chr2R 10411890 10411894 34 127 9.0 6.0 7.5 4.0 136 chr2R 10411758 intron CG42732 - chr2R 10411826 intron CG42732 - chr2R 10411894 intron CG42732 - chr2R_34_10410001 chr2R_10410001 RAL-850 981 chr2R 10477117 10477190 chr2R 10477506 10477596 14 390 6.0 0.0 3.0 3.5 479 chr2R 10477117 intron whd - chr2R 10477356 intron whd - chr2R 10477596 intron whd - chr2R_14_10475001 chr2R_10475001 RAL-850 982 chr2R 10509545 10509554 chr2R 10509682 10509691 6 137 22.0 0.0 11.0 0.5 146 chr2R 10509545 intron lola - chr2R 10509618 intron lola - chr2R 10509691 intron lola - chr2R_6_10505001 chr2R_10505001 RAL-850 983 chr2R 10563202 10563260 chr2R 10563350 10563408 13 148 0.0 8.5 4.2 2.5 206 chr2R 10563202 intron psq + chr2R 10563305 intron psq + chr2R 10563408 intron psq + chr2R_13_10560001 chr2R_10560001 RAL-850 984 chr2R 10563506 10563518 chr2R 10563636 10563638 4 128 14.5 11.5 13.0 0.3 132 chr2R 10563506 intron psq + chr2R 10563572 intron psq + chr2R 10563638 intron psq + chr2R_4_10560001 chr2R_10560001 RAL-850 985 chr2R 10563521 10563577 chr2R 10563635 10563707 23 125 5.0 11.5 8.2 2.5 186 chr2R 10563521 intron psq + chr2R 10563614 intron psq + chr2R 10563707 intron psq + chr2R_23_10560001 chr2R_10560001 RAL-850 986 chr2R 10574588 10574628 chr2R 10574720 10574760 9 132 16.0 12.0 14.0 0.6 172 chr2R 10574588 intron psq + chr2R 10574674 intron psq + chr2R 10574760 intron psq + chr2R_9_10570001 chr2R_10570001 RAL-850 987 chr2R 10585511 10585583 chr2R 10594144 10594201 Tirant 6 8621 5.0 5.0 5.0 1.0 8690 chr2R 10585511 intron psq + chr2R 10589856 intron psq + chr2R 10594201 intron psq + chr2R_6_10585001 chr2R_10585001 RAL-850 988 chr2R 10595749 10595815 chr2R 10595887 10595948 6 134 4.0 9.0 6.5 0.8 199 chr2R 10595749 intron psq + chr2R 10595848 intron psq + chr2R 10595948 intron psq + chr2R_6_10595001 chr2R_10595001 RAL-850 989 chr2R 10644008 10644060 chr2R 10644136 10644188 21 128 14.0 1.0 7.5 2.5 180 chr2R 10644008 intron Git - chr2R 10644098 intron Git - chr2R 10644188 intron Git - chr2R_21_10640001 chr2R_10640001 RAL-850 990 chr2R 10658018 10658026 chr2R 10658150 10658153 8 138 13.5 9.5 11.5 0.6 135 chr2R 10658018 intergenic CR44452 - chr2R 10658086 intergenic not near genes chr2R 10658153 intergenic not near genes chr2R_8_10655001 chr2R_10655001 RAL-850 991 chr2R 10658031 10658084 chr2R 10658147 10658216 26 138 6.5 9.0 7.8 3.0 185 chr2R 10658031 intergenic CR44452 - chr2R 10658124 intergenic not near genes chr2R 10658216 intergenic not near genes chr2R_26_10655001 chr2R_10655001 RAL-850 992 chr2R 10668027 10668061 chr2R 10668145 10668162 11 116 15.5 12.5 14.0 0.7 135 chr2R 10668027 intergenic not near genes chr2R 10668094 intergenic not near genes chr2R 10668162 intergenic not near genes chr2R_11_10665001 chr2R_10665001 RAL-850 993 chr2R 10668063 10668081 chr2R 10668143 10668187 12 99 12.0 12.0 12.0 0.9 124 chr2R 10668063 intergenic not near genes chr2R 10668125 intergenic not near genes chr2R 10668187 intergenic not near genes chr2R_12_10665001 chr2R_10665001 RAL-850 994 chr2R 10755107 10755142 chr2R 10755243 10755266 11 123 17.5 12.0 14.8 0.7 159 chr2R 10755107 exon CG33144 - chr2R 10755186 exon CG33144 - chr2R 10755266 exon CG33144 - chr2R_11_10755001 chr2R_10755001 RAL-850 995 chr2R 10755145 10755183 chr2R 10755241 10755289 11 110 9.5 12.0 10.8 0.9 144 chr2R 10755145 exon CG33144 - chr2R 10755217 exon CG33144 - chr2R 10755289 exon CG33144 - chr2R_11_10755001 chr2R_10755001 RAL-850 996 chr2R 10796658 10796686 chr2R 10796807 10796835 12 149 19.0 6.5 12.8 0.9 177 chr2R 10796658 intron CG33144 - chr2R 10796746 intron CG33144 - chr2R 10796835 intron CG33144 - chr2R_12_10795001 chr2R_10795001 RAL-850 997 chr2R 10796687 10796737 chr2R 10796805 10796886 18 145 8.0 6.0 7.0 2.2 199 chr2R 10796687 intron CG33144 - chr2R 10796786 intron CG33144 - chr2R 10796886 intron CG33144 - chr2R_18_10795001 chr2R_10795001 RAL-850 998 chr2R 10800385 10800454 chr2R 10800525 10800582 10 134 7.0 0.0 3.5 2.2 197 chr2R 10800385 intergenic wde - chr2R 10800484 3` UTR wde - chr2R 10800582 3` UTR wde - chr2R_10_10800001 chr2R_10800001 RAL-850 999 chr2R 10860506 10860514 chr2R 10860632 10860640 7 126 4.5 0.0 2.2 2.2 134 chr2R 10860506 intron CG30015 - chr2R 10860573 intron CG30015 - chr2R 10860640 intron CG30015 - chr2R_7_10860001 chr2R_10860001 RAL-850 1000 chr2R 10948013 10948052 chr2R 10955612 10955652 17.6 14 7599 2.0 17.0 9.5 1.3 7639 chr2R 10948013 intergenic not near genes chr2R 10951832 intergenic not near genes chr2R 10955652 intergenic not near genes chr2R_14_10950001 chr2R_10950001 RAL-850 1001 chr2R 10959040 10959107 chr2R 10959169 10959218 19 127 0.5 10.0 5.2 3.1 178 chr2R 10959040 intergenic not near genes chr2R 10959129 intergenic not near genes chr2R 10959218 intergenic not near genes chr2R_19_10955001 chr2R_10955001 RAL-850 1002 chr2R 10979626 10979681 chr2R 10980126 10980199 297 16 511 6.0 7.0 6.5 2.1 573 chr2R 10979626 intergenic not near genes chr2R 10979912 intergenic not near genes chr2R 10980199 intergenic not near genes chr2R_16_10975001 chr2R_10975001 RAL-850 1003 chr2R 11009774 11009840 chr2R 11018998 11019059 roo 30 9221 10.5 13.5 12.0 2.3 9285 chr2R 11009774 intron luna - chr2R 11014416 intron luna - chr2R 11019059 intron luna - chr2R_30_11010001 chr2R_11010001 RAL-850 1004 chr2R 11019837 11019894 chr2R 11024951 11025010 jockey 17 5113 7.0 5.5 6.2 2.4 5173 chr2R 11019837 intron luna - chr2R 11022424 intron luna - chr2R 11025010 intron luna - chr2R_17_11020001 chr2R_11020001 RAL-850 1005 chr2R 11034824 11034882 chr2R 11034945 11035017 5 130 8.0 7.5 7.8 0.6 193 chr2R 11034824 intron luna - chr2R 11034920 intron luna - chr2R 11035017 intron luna - chr2R_5_11030001 chr2R_11030001 RAL-850 1006 chr2R 11044099 11044166 chr2R 11044233 11044294 14 128 6.0 8.5 7.2 1.7 195 chr2R 11044099 intron luna - chr2R 11044196 intron luna - chr2R 11044294 intron luna - chr2R_14_11040001 chr2R_11040001 RAL-850 1007 chr2R 11066455 11066462 chr2R 11066566 11066590 4 124 9.0 19.5 14.2 0.3 135 chr2R 11066455 intron luna - chr2R 11066522 intron luna - chr2R 11066590 intron luna - chr2R_4_11065001 chr2R_11065001 RAL-850 1008 chr2R 11117197 11117201 chr2R 11117324 11117328 4 127 0.0 16.0 8.0 0.4 131 chr2R 11117197 intergenic Cyp12d1-p - chr2R 11117262 3` UTR Cyp12d1-p - chr2R 11117328 3` UTR Cyp12d1-p - chr2R_4_11115001 chr2R_11115001 RAL-850 1009 chr2R 11152572 11152632 chr2R 11152708 11152769 18 136 10.5 7.5 9.0 1.8 197 chr2R 11152572 intron CG13229 - chr2R 11152670 intron CG13229 - chr2R 11152769 intron CG13229 - chr2R_18_11150001 chr2R_11150001 RAL-850 1010 chr2R 11161611 11161657 chr2R 11161801 11161847 21 188 10.5 8.0 9.2 2.1 236 chr2R 11161611 intron,intron CG13229 -,shn + chr2R 11161729 intron,intron CG13229 -,shn + chr2R 11161847 intron,intron CG13229 -,shn + chr2R_21_11160001 chr2R_11160001 RAL-850 1011 chr2R 11179226 11179283 chr2R 11179362 11179389 28 134 14.0 14.0 14.0 1.9 163 chr2R 11179226 intron shn + chr2R 11179308 intron shn + chr2R 11179389 intron shn + chr2R_28_11175001 chr2R_11175001 RAL-850 1012 chr2R 11207782 11207835 chr2R 11208025 11208071 BS 22 242 11.5 12.0 11.8 1.7 289 chr2R 11207782 intron shn + chr2R 11207926 intron shn + chr2R 11208071 intron shn + chr2R_22_11205001 chr2R_11205001 RAL-850 1013 chr2R 11263832 11263837 chr2R 11263995 11264003 4 165 0.0 21.0 10.5 0.3 171 chr2R 11263832 intergenic not near genes chr2R 11263918 intergenic not near genes chr2R 11264003 intergenic not near genes chr2R_4_11260001 chr2R_11260001 RAL-850 1014 chr2R 11297583 11297592 chr2R 11301954 11301963 flea 5 4371 24.0 13.0 18.5 0.3 4380 chr2R 11297583 intergenic CG42336 - chr2R 11299773 intergenic not near genes chr2R 11301963 5` UTR CG7741 + chr2R_5_11295001 chr2R_11295001 RAL-850 1015 chr2R 11297593 11297615 chr2R 11301949 11301954 flea 16 4363 16.0 12.0 14.0 1.1 4361 chr2R 11297593 intergenic CG42336 - chr2R 11299774 intergenic not near genes chr2R 11301954 5` UTR CG7741 + chr2R_16_11295001 chr2R_11295001 RAL-850 1016 chr2R 11297616 11297639 chr2R 11301942 11302010 flea 10 4362 12.5 9.5 11.0 0.8 4394 chr2R 11297616 intergenic CG42336 - chr2R 11299813 intergenic not near genes chr2R 11302010 5` UTR CG7741 + chr2R_10_11295001 chr2R_11295001 RAL-850 1017 chr2R 11344096 11344112 chr2R 11344240 11344256 8 144 7.0 6.0 6.5 1.1 160 chr2R 11344096 intergenic alphaTry - chr2R 11344176 intergenic alphaTry - chr2R 11344256 intergenic alphaTry - chr2R_8_11340001 chr2R_11340001 RAL-850 1018 chr2R 11365548 11365577 chr2R 11365691 11365720 6 148 51.0 67.0 59.0 0.1 172 chr2R 11365548 intergenic not near genes chr2R 11365634 intergenic not near genes chr2R 11365720 intergenic not near genes chr2R_6_11365001 chr2R_11365001 RAL-850 1019 chr2R 11384034 11384054 chr2R 11384200 11384204 9 158 19.5 10.5 15.0 0.6 170 chr2R 11384034 5` UTR Sod3 - chr2R 11384119 intergenic Sod3 - chr2R 11384204 intergenic Sod3 - chr2R_9_11380001 chr2R_11380001 RAL-850 1020 chr2R 11384062 11384082 chr2R 11384197 11384223 6 148 13.0 10.0 11.5 0.5 161 chr2R 11384062 5` UTR Sod3 - chr2R 11384142 intergenic Sod3 - chr2R 11384223 intergenic Sod3 - chr2R_6_11380001 chr2R_11380001 RAL-850 1021 chr2R 11384085 11384110 chr2R 11384195 11384206 10 136 5.5 9.5 7.5 1.2 121 chr2R 11384085 5` UTR Sod3 - chr2R 11384146 intergenic Sod3 - chr2R 11384206 intergenic Sod3 - chr2R_10_11380001 chr2R_11380001 RAL-850 1022 chr2R 11406748 11406751 chr2R 11406870 11406877 4 126 7.5 15.5 11.5 0.3 129 chr2R 11406748 exon CG7759 + chr2R 11406812 exon CG7759 + chr2R 11406877 exon CG7759 + chr2R_4_11405001 chr2R_11405001 RAL-850 1023 chr2R 11415476 11415504 chr2R 11418675 11418691 opus 11 3196 13.0 14.5 13.8 0.7 3215 chr2R 11415476 intron Drip - chr2R 11417084 intron Drip - chr2R 11418691 intron Drip - chr2R_11_11415001 chr2R_11415001 RAL-850 1024 chr2R 11415505 11415544 chr2R 11418672 11418743 opus 14 3196 6.0 14.0 10.0 1.3 3238 chr2R 11415505 intron Drip - chr2R 11417124 intron Drip - chr2R 11418743 intron Drip - chr2R_14_11415001 chr2R_11415001 RAL-850 1025 chr2R 11419822 11419895 chr2R 11419995 11420022 23 171 9.5 8.5 9.0 2.3 200 chr2R 11419822 intron Drip - chr2R 11419922 intron Drip - chr2R 11420022 intron Drip - chr2R_23_11415001 chr2R_11415001 RAL-850 1026 chr2R 11436609 11436845 chr2R 11436765 11436971 12 133 8.5 11.0 9.8 1.1 362 chr2R 11436609 intron CG7777 + chr2R 11436790 intron CG7777 + chr2R 11436971 intron CG7777 + chr2R_12_11435001 chr2R_11435001 RAL-850 1027 chr2R 11472605 11472676 chr2R 11473852 11473923 pogo 38 1245 11.0 10.5 10.8 3.2 1318 chr2R 11472605 intergenic not near genes chr2R 11473264 intergenic not near genes chr2R 11473923 intergenic not near genes chr2R_38_11470001 chr2R_11470001 RAL-850 1028 chr2R 11484308 11484381 chr2R 11484435 11484476 36 124 8.0 9.5 8.8 3.7 168 chr2R 11484308 intron inv + chr2R 11484392 intron inv + chr2R 11484476 intron inv + chr2R_36_11480001 chr2R_11480001 RAL-850 1029 chr2R 11494264 11494337 chr2R 11494397 11494470 23 133 9.5 9.0 9.2 2.3 206 chr2R 11494264 intron inv + chr2R 11494367 intron inv + chr2R 11494470 intron inv + chr2R_23_11490001 chr2R_11490001 RAL-850 1030 chr2R 11555447 11555499 chr2R 11555613 11555665 8 166 1.0 6.0 3.5 1.8 218 chr2R 11555447 intergenic not near genes chr2R 11555556 intergenic not near genes chr2R 11555665 intergenic not near genes chr2R_8_11555001 chr2R_11555001 RAL-850 1031 chr2R 11561384 11561456 chr2R 11561519 11561564 25 125 2.0 9.0 5.5 3.8 180 chr2R 11561384 intergenic not near genes chr2R 11561474 intergenic not near genes chr2R 11561564 intergenic not near genes chr2R_25_11560001 chr2R_11560001 RAL-850 1032 chr2R 11592791 11592860 chr2R 11592954 11592990 23 161 5.0 7.5 6.2 3.2 199 chr2R 11592791 intron tou - chr2R 11592890 intron tou - chr2R 11592990 intron tou - chr2R_23_11590001 chr2R_11590001 RAL-850 1033 chr2R 11614575 11614800 chr2R 11614713 11614938 43 138 4.5 4.5 4.5 7.8 363 chr2R 11614575 intron tou - chr2R 11614756 intron tou - chr2R 11614938 intron tou - chr2R_43_11610001 chr2R_11610001 RAL-850 1034 chr2R 11631330 11631410 chr2R 11631481 11631540 17 131 0.0 5.0 2.5 4.9 210 chr2R 11631330 intron CG9005 - chr2R 11631435 intron CG9005 - chr2R 11631540 intron CG9005 - chr2R_17_11630001 chr2R_11630001 RAL-850 1035 chr2R 11675557 11675628 chr2R 11675690 11675761 24 132 6.5 6.5 6.5 3.2 204 chr2R 11675557 intron Roc2 - chr2R 11675659 intron Roc2 - chr2R 11675761 intron Roc2 - chr2R_24_11675001 chr2R_11675001 RAL-850 1036 chr2R 11724106 11724181 chr2R 11724239 11724314 20 133 3.5 2.5 3.0 5.0 208 chr2R 11724106 intron pyr + chr2R 11724210 intron pyr + chr2R 11724314 exon pyr + chr2R_20_11720001 chr2R_11720001 RAL-850 1037 chr2R 11772667 11772714 chr2R 11772794 11772841 11 127 3.5 8.5 6.0 1.6 174 chr2R 11772667 intron ths + chr2R 11772754 intron ths + chr2R 11772841 intron ths + chr2R_11_11770001 chr2R_11770001 RAL-850 1038 chr2R 11934042 11934075 chr2R 11934174 11934207 12 132 14.5 9.5 12.0 0.9 165 chr2R 11934042 intergenic not near genes chr2R 11934124 intergenic not near genes chr2R 11934207 intergenic not near genes chr2R_12_11930001 chr2R_11930001 RAL-850 1039 chr2R 11934076 11934104 chr2R 11934167 11934233 11 128 9.5 7.0 8.2 1.2 157 chr2R 11934076 intergenic not near genes chr2R 11934154 intergenic not near genes chr2R 11934233 intergenic not near genes chr2R_11_11930001 chr2R_11930001 RAL-850 1040 chr2R 12061012 12061065 chr2R 12061142 12061196 10 130 6.5 0.0 3.2 2.4 184 chr2R 12061012 intron Drep-3 + chr2R 12061104 intron Drep-3 + chr2R 12061196 intron Drep-3 + chr2R_10_12060001 chr2R_12060001 RAL-850 1041 chr2R 12073349 12073419 chr2R 12073489 12073528 27 138 11.0 11.0 11.0 2.2 179 chr2R 12073349 intron CG8888 - chr2R 12073438 intron CG8888 - chr2R 12073528 intron CG8888 - chr2R_27_12070001 chr2R_12070001 RAL-850 1042 chr2R 12096797 12096852 chr2R 12097297 12097354 21 499 6.5 6.0 6.2 2.9 557 chr2R 12096797 intron jeb - chr2R 12097076 intron jeb - chr2R 12097354 intron jeb - chr2R_21_12095001 chr2R_12095001 RAL-850 1043 chr2R 12124784 12124846 chr2R 12124918 12124980 18 132 13.5 6.0 9.8 1.7 196 chr2R 12124784 intergenic not near genes chr2R 12124882 intergenic not near genes chr2R 12124980 intergenic not near genes chr2R_18_12120001 chr2R_12120001 RAL-850 1044 chr2R 12185956 12186031 chr2R 12186101 12186176 45 143 11.0 16.5 13.8 3.0 220 chr2R 12185956 intron Cyp6g1 + chr2R 12186066 intron Cyp6g1 + chr2R 12186176 intron Cyp6g1 + chr2R_45_12185001 chr2R_12185001 RAL-850 1045 chr2R 12185226 12185246 chr2R 12188101 12188121 16 2876 47.0 257.0 152.0 0.1 2895 chr2R 12185226 3` UTR,exon CG13175 +,CG33964 + chr2R 12186674 exon Cyp6g1 + chr2R 12188121 exon Cyp6g1 + chr2R_16_12185001 chr2R_12185001 RAL-850 1046 chr2R 12185225 12185264 chr2R 12188122 12188139 12 2878 39.0 248.5 143.8 0.1 2914 chr2R 12185225 3` UTR,exon CG13175 +,CG33964 + chr2R 12186682 exon Cyp6g1 + chr2R 12188139 3` UTR Cyp6g1 + chr2R_12_12185001 chr2R_12185001 RAL-850 1047 chr2R 12189355 12189409 chr2R 12189597 12189625 20 229 237.0 222.0 229.5 0.1 270 chr2R 12189355 exon Cyp6g2 - chr2R 12189490 exon Cyp6g2 - chr2R 12189625 exon Cyp6g2 - chr2R_20_12185001 chr2R_12185001 RAL-850 1048 chr2R 12187483 12187486 chr2R 12190050 12190052 4 2566 152.5 219.0 185.8 0.0 2569 chr2R 12187483 exon Cyp6g1 + chr2R 12188768 exon Cyp6g2 - chr2R 12190052 exon Cyp6g2 - chr2R_4_12185001 chr2R_12185001 RAL-850 1049 chr2R 12187482 12187503 chr2R 12190053 12190069 23 2570 175.5 213.5 194.5 0.1 2587 chr2R 12187482 exon Cyp6g1 + chr2R 12188776 exon Cyp6g2 - chr2R 12190069 exon Cyp6g2 - chr2R_23_12185001 chr2R_12185001 RAL-850 1050 chr2R 12187478 12187507 chr2R 12190070 12190073 9 2575 182.5 192.0 187.2 0.0 2595 chr2R 12187478 exon Cyp6g1 + chr2R 12188776 exon Cyp6g2 - chr2R 12190073 exon Cyp6g2 - chr2R_9_12185001 chr2R_12185001 RAL-850 1051 chr2R 12187476 12187521 chr2R 12190074 12190087 29 2576 197.5 188.0 192.8 0.1 2611 chr2R 12187476 exon Cyp6g1 + chr2R 12188782 exon Cyp6g2 - chr2R 12190087 exon Cyp6g2 - chr2R_29_12185001 chr2R_12185001 RAL-850 1052 chr2R 12187471 12187508 chr2R 12190088 12190124 88 2583 184.5 171.0 177.8 0.5 2653 chr2R 12187471 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_88_12185001 chr2R_12185001 RAL-850 1053 chr2R 12213849 12213860 chr2R 12213979 12213990 5 130 7.0 10.5 8.8 0.5 141 chr2R 12213849 intergenic CG13171 + chr2R 12213920 intergenic CG13171 + chr2R 12213990 intergenic CG13171 + chr2R_5_12210001 chr2R_12210001 RAL-850 1054 chr2R 12217526 12217597 chr2R 12217657 12217697 22 129 9.0 8.0 8.5 2.3 171 chr2R 12217526 intergenic not near genes chr2R 12217612 intergenic not near genes chr2R 12217697 intergenic not near genes chr2R_22_12215001 chr2R_12215001 RAL-850 1055 chr2R 12272278 12272353 chr2R 12272411 12272486 36 131 11.0 8.0 9.5 3.4 208 chr2R 12272278 intron Cam + chr2R 12272382 intron Cam + chr2R 12272486 intron Cam + chr2R_36_12270001 chr2R_12270001 RAL-850 1056 chr2R 12284292 12284327 chr2R 12284426 12284461 12 132 0.0 13.0 6.5 1.6 169 chr2R 12284292 intron CG42700 + chr2R 12284376 intron CG42700 + chr2R 12284461 intron CG42700 + chr2R_12_12280001 chr2R_12280001 RAL-850 1057 chr2R 12366193 12366256 chr2R 12366413 12366484 41 222 9.5 8.5 9.0 4.1 291 chr2R 12366193 intergenic not near genes chr2R 12366338 intergenic not near genes chr2R 12366484 intergenic not near genes chr2R_41_12365001 chr2R_12365001 RAL-850 1058 chr2R 12413118 12413126 chr2R 12413244 12413252 5 126 7.0 0.0 3.5 1.1 134 chr2R 12413118 intergenic not near genes chr2R 12413185 intergenic not near genes chr2R 12413252 intergenic not near genes chr2R_5_12410001 chr2R_12410001 RAL-850 1059 chr2R 12481144 12481151 chr2R 12482981 12483005 roo 5 1843 9.0 18.5 13.8 0.3 1861 chr2R 12481144 exon Dh44-R2 + chr2R 12482074 intron Dh44-R2 + chr2R 12483005 intron Dh44-R2 + chr2R_5_12480001 chr2R_12480001 RAL-850 1060 chr2R 12481156 12481165 chr2R 12482954 12482960 roo 8 1823 8.0 12.0 10.0 0.7 1804 chr2R 12481156 exon Dh44-R2 + chr2R 12482058 intron Dh44-R2 + chr2R 12482960 intron Dh44-R2 + chr2R_8_12480001 chr2R_12480001 RAL-850 1061 chr2R 12501651 12501659 chr2R 12503863 12503870 Rt1c 4 2212 31.5 11.5 21.5 0.2 2219 chr2R 12501651 intron fdl - chr2R 12502760 intron fdl - chr2R 12503870 intron fdl - chr2R_4_12500001 chr2R_12500001 RAL-850 1062 chr2R 12501660 12501722 chr2R 12503859 12503886 Rt1c 23 2200 13.0 11.0 12.0 1.8 2226 chr2R 12501660 intron fdl - chr2R 12502773 intron fdl - chr2R 12503886 intron fdl - chr2R_23_12500001 chr2R_12500001 RAL-850 1063 chr2R 12540443 12540458 chr2R 12540571 12540591 5 131 23.5 11.0 17.2 0.3 148 chr2R 12540443 intron fra + chr2R 12540517 intron fra + chr2R 12540591 intron fra + chr2R_5_12540001 chr2R_12540001 RAL-850 1064 chr2R 12540462 12540497 chr2R 12540568 12540630 16 126 8.5 8.5 8.5 1.7 168 chr2R 12540462 intron fra + chr2R 12540546 intron fra + chr2R 12540630 intron fra + chr2R_16_12540001 chr2R_12540001 RAL-850 1065 chr2R 12555404 12555423 chr2R 12556159 12556178 7 755 13.0 7.5 10.2 0.6 774 chr2R 12555404 intron fra + chr2R 12555791 intron fra + chr2R 12556178 intron fra + chr2R_7_12555001 chr2R_12555001 RAL-850 1066 chr2R 12555425 12555469 chr2R 12556155 12556203 24 745 6.0 6.0 6.0 3.4 778 chr2R 12555425 intron fra + chr2R 12555814 intron fra + chr2R 12556203 intron fra + chr2R_24_12555001 chr2R_12555001 RAL-850 1067 chr2R 12565544 12565595 chr2R 12565977 12566028 18 433 1.0 7.5 4.2 3.5 484 chr2R 12565544 intergenic not near genes chr2R 12565786 intergenic Cyp301a1 + chr2R 12566028 intergenic Cyp301a1 + chr2R_18_12565001 chr2R_12565001 RAL-850 1068 chr2R 12602821 12602836 chr2R 12602955 12602970 9 134 0.0 18.5 9.2 0.9 149 chr2R 12602821 intron Amph + chr2R 12602896 intron Amph + chr2R 12602970 intron Amph + chr2R_9_12600001 chr2R_12600001 RAL-850 1069 chr2R 12625466 12625539 chr2R 12625594 12625667 19 128 5.5 6.5 6.0 2.7 201 chr2R 12625466 intergenic CG30054 +,CG17760 + chr2R 12625566 intergenic CG30054 +,CG17760 + chr2R 12625667 intergenic CG17760 +,CG30054 + chr2R_19_12625001 chr2R_12625001 RAL-850 1070 chr2R 12671400 12671417 chr2R 12671557 12671563 6 152 14.5 21.0 17.8 0.3 163 chr2R 12671400 intron CG42708 - chr2R 12671482 intron CG42708 - chr2R 12671563 exon CG42708 - chr2R_6_12670001 chr2R_12670001 RAL-850 1071 chr2R 12693917 12693940 chr2R 12694044 12694067 8 127 9.0 10.5 9.8 0.7 150 chr2R 12693917 intergenic not near genes chr2R 12693992 intergenic not near genes chr2R 12694067 intergenic not near genes chr2R_8_12690001 chr2R_12690001 RAL-850 1072 chr2R 12707475 12707548 chr2R 12715889 12715964 roo 18 8416 8.0 2.0 5.0 3.0 8489 chr2R 12707475 intron CG42663 + chr2R 12711720 intron CG42663 + chr2R 12715964 intron CG42663 + chr2R_18_12710001 chr2R_12710001 RAL-850 1073 chr2R 12728860 12728906 chr2R 12729012 12729054 6 149 0.0 18.0 9.0 0.6 194 chr2R 12728860 intron CG42663 + chr2R 12728957 intron CG42663 + chr2R 12729054 intron CG42663 + chr2R_6_12725001 chr2R_12725001 RAL-850 1074 chr2R 12774197 12774262 chr2R 12774332 12774411 10 139 5.5 0.5 3.0 2.5 214 chr2R 12774197 intergenic not near genes chr2R 12774304 intergenic not near genes chr2R 12774411 intergenic not near genes chr2R_10_12770001 chr2R_12770001 RAL-850 1075 chr2R 12777764 12777773 chr2R 12777905 12777914 6 141 10.5 10.5 10.5 0.5 150 chr2R 12777764 5` UTR CR45266 + chr2R 12777839 5` UTR CR45266 + chr2R 12777914 5` UTR CR45266 + chr2R_6_12775001 chr2R_12775001 RAL-850 1076 chr2R 12789271 12789288 chr2R 12797673 12797675 roo 6 8406 12.5 10.5 11.5 0.5 8404 chr2R 12789271 intron,3` UTR sca +,CR45137 - chr2R 12793473 intron,intron sca +,CR45137 - chr2R 12797675 intron,3` UTR sca +,CR45137 - chr2R_6_12790001 chr2R_12790001 RAL-850 1077 chr2R 12789292 12789327 chr2R 12797671 12797708 roo 21 8396 8.5 10.5 9.5 2.0 8416 chr2R 12789292 intron,3` UTR sca +,CR45137 - chr2R 12793500 intron,intron sca +,CR45137 - chr2R 12797708 intron,3` UTR sca +,CR45137 - chr2R_21_12790001 chr2R_12790001 RAL-850 1078 chr2R 12819403 12819469 chr2R 12824532 12824596 jockey 27 5126 11.5 11.0 11.2 2.2 5193 chr2R 12819403 intergenic not near genes chr2R 12822000 intergenic not near genes chr2R 12824596 intergenic not near genes chr2R_27_12820001 chr2R_12820001 RAL-850 1079 chr2R 12856963 12856967 chr2R 12868317 12868321 accord 5 11354 24.0 14.0 19.0 0.2 11358 chr2R 12856963 intron CG17574 - chr2R 12862642 intron CG17574 - chr2R 12868321 intron,intron CG17574 -,CR45140 + chr2R_5_12860001 chr2R_12860001 RAL-850 1080 chr2R 12856970 12856979 chr2R 12868324 12868333 accord 5 11354 24.0 13.0 18.5 0.3 11363 chr2R 12856970 intron CG17574 - chr2R 12862652 intron CG17574 - chr2R 12868333 intron,intron CG17574 -,CR45140 + chr2R_5_12860001 chr2R_12860001 RAL-850 1081 chr2R 12897416 12897486 chr2R 12897557 12897627 13 140 0.5 0.5 0.5 8.7 211 chr2R 12897416 intron vg + chr2R 12897522 intron vg + chr2R 12897627 intron vg + chr2R_13_12895001 chr2R_12895001 RAL-850 1082 chr2R 12910321 12910365 chr2R 12910452 12910498 15 133 0.0 12.5 6.2 2.1 177 chr2R 12910321 intergenic not near genes chr2R 12910410 intergenic not near genes chr2R 12910498 intergenic not near genes chr2R_15_12910001 chr2R_12910001 RAL-850 1083 chr2R 12952815 12952844 chr2R 12952947 12952978 10 134 0.0 9.0 4.5 1.8 163 chr2R 12952815 intergenic CG13321 + chr2R 12952896 intergenic CG13321 + chr2R 12952978 intergenic CG13321 + chr2R_10_12950001 chr2R_12950001 RAL-850 1084 chr2R 13043014 13043036 chr2R 13043144 13043166 6 130 0.0 6.0 3.0 1.5 152 chr2R 13043014 intergenic not near genes chr2R 13043090 intergenic not near genes chr2R 13043166 intergenic not near genes chr2R_6_13040001 chr2R_13040001 RAL-850 1085 chr2R 13089703 13089719 chr2R 13089863 13089879 10 160 18.0 7.5 12.8 0.7 176 chr2R 13089703 intergenic not near genes chr2R 13089791 intergenic not near genes chr2R 13089879 intergenic not near genes chr2R_10_13085001 chr2R_13085001 RAL-850 1086 chr2R 13089720 13089776 chr2R 13089862 13089910 29 153 7.5 7.5 7.5 3.4 190 chr2R 13089720 intergenic not near genes chr2R 13089815 intergenic not near genes chr2R 13089910 intergenic not near genes chr2R_29_13085001 chr2R_13085001 RAL-850 1087 chr2R 13136800 13136864 chr2R 13141648 13141687 Doc 30 4846 10.5 13.0 11.8 2.3 4887 chr2R 13136800 exon Cap-G + chr2R 13139244 intron Cap-G + chr2R 13141687 intron Cap-G + chr2R_30_13135001 chr2R_13135001 RAL-850 1088 chr2R 13218256 13218320 chr2R 13218389 13218477 11 141 9.0 0.0 4.5 2.0 221 chr2R 13218256 intron CG4630 - chr2R 13218366 intron CG4630 - chr2R 13218477 intron CG4630 - chr2R_11_13215001 chr2R_13215001 RAL-850 1089 chr2R 13302529 13302600 chr2R 13302657 13302728 34 128 8.5 8.0 8.2 3.7 199 chr2R 13302529 intergenic not near genes chr2R 13302628 intergenic not near genes chr2R 13302728 intergenic not near genes chr2R_34_13300001 chr2R_13300001 RAL-850 1090 chr2R 13372611 13372694 chr2R 13372741 13372824 15 130 6.5 5.5 6.0 2.1 213 chr2R 13372611 intergenic not near genes chr2R 13372718 intergenic not near genes chr2R 13372824 intergenic not near genes chr2R_15_13370001 chr2R_13370001 RAL-850 1091 chr2R 13376604 13376638 chr2R 13376764 13376798 14 160 1.5 8.5 5.0 2.3 194 chr2R 13376604 intron CG10814 - chr2R 13376701 intron CG10814 - chr2R 13376798 exon CG10814 - chr2R_14_13375001 chr2R_13375001 RAL-850 1092 chr2R 13403872 13403882 chr2R 13404007 13404007 7 134 14.5 0.0 7.2 0.9 135 chr2R 13403872 intergenic not near genes chr2R 13403940 intergenic not near genes chr2R 13404007 intergenic not near genes chr2R_7_13400001 chr2R_13400001 RAL-850 1093 chr2R 13403883 13403937 chr2R 13404006 13404072 20 134 4.5 0.0 2.2 6.2 189 chr2R 13403883 intergenic not near genes chr2R 13403978 intergenic not near genes chr2R 13404072 intergenic not near genes chr2R_20_13400001 chr2R_13400001 RAL-850 1094 chr2R 13439092 13439223 chr2R 13439280 13439349 27 185 2.5 12.0 7.2 3.3 257 chr2R 13439092 intergenic CG42321 -,cnn - chr2R 13439220 intergenic cnn -,CG42321 - chr2R 13439349 3` UTR cnn - chr2R_27_13435001 chr2R_13435001 RAL-850 1095 chr2R 13468838 13468877 chr2R 13468965 13469004 7 121 9.5 0.0 4.8 1.2 166 chr2R 13468838 intron arr - chr2R 13468921 intron arr - chr2R 13469004 intron arr - chr2R_7_13465001 chr2R_13465001 RAL-850 1096 chr2R 13532473 13532523 chr2R 13532639 13532689 10 166 6.0 6.5 6.2 1.4 216 chr2R 13532473 intron Vmat - chr2R 13532581 intron Vmat - chr2R 13532689 intron Vmat - chr2R_10_13530001 chr2R_13530001 RAL-850 1097 chr2R 13540156 13540208 chr2R 13540288 13540341 6 132 3.5 0.0 1.8 2.1 185 chr2R 13540156 intron CG6145 - chr2R 13540248 intron CG6145 - chr2R 13540341 intron CG6145 - chr2R_6_13540001 chr2R_13540001 RAL-850 1098 chr2R 13554686 13554767 chr2R 13554828 13554902 9 136 0.0 11.0 5.5 1.4 216 chr2R 13554686 intron Roe1 + chr2R 13554794 intron Roe1 + chr2R 13554902 intron Roe1 + chr2R_9_13550001 chr2R_13550001 RAL-850 1099 chr2R 13580485 13580502 chr2R 13580885 13580901 jockey 12 399 0.0 13.5 6.8 1.5 416 chr2R 13580485 3` UTR CG6191 - chr2R 13580693 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580901 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_12_13580001 chr2R_13580001 RAL-850 1100 chr2R 13580506 13580521 chr2R 13580851 13580921 jockey 10 386 0.0 6.0 3.0 2.5 415 chr2R 13580506 3` UTR CG6191 - chr2R 13580714 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580921 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_10_13580001 chr2R_13580001 RAL-850 1101 chr2R 13622162 13622193 chr2R 13622290 13622321 12 128 8.0 15.5 11.8 0.9 159 chr2R 13622162 intergenic not near genes chr2R 13622242 intergenic not near genes chr2R 13622321 intergenic not near genes chr2R_12_13620001 chr2R_13620001 RAL-850 1102 chr2R 13649973 13650033 chr2R 13650118 13650178 12 144 9.5 9.5 9.5 1.1 205 chr2R 13649973 intron fas + chr2R 13650076 intron fas + chr2R 13650178 intron fas + chr2R_12_13650001 chr2R_13650001 RAL-850 1103 chr2R 13657372 13657375 chr2R 13657493 13657506 5 129 13.0 0.0 6.5 0.7 134 chr2R 13657372 intron fas + chr2R 13657439 intron fas + chr2R 13657506 intron fas + chr2R_5_13655001 chr2R_13655001 RAL-850 1104 chr2R 13657386 13657413 chr2R 13657487 13657539 8 124 6.5 0.0 3.2 1.9 153 chr2R 13657386 intron fas + chr2R 13657462 intron fas + chr2R 13657539 intron fas + chr2R_8_13655001 chr2R_13655001 RAL-850 1105 chr2R 13663579 13663633 chr2R 13663691 13663761 19 121 8.0 11.0 9.5 1.8 182 chr2R 13663579 intron,5` UTR fas +,CG6209 - chr2R 13663670 intron fas + chr2R 13663761 intron fas + chr2R_19_13660001 chr2R_13660001 RAL-850 1106 chr2R 13684216 13684265 chr2R 13684344 13684393 24 128 1.0 10.5 5.8 3.5 177 chr2R 13684216 intron fas + chr2R 13684304 intron fas + chr2R 13684393 intron fas + chr2R_24_13680001 chr2R_13680001 RAL-850 1107 chr2R 13709797 13709854 chr2R 13709940 13709997 28 143 7.0 0.0 3.5 6.2 200 chr2R 13709797 intron fas + chr2R 13709897 intron fas + chr2R 13709997 intron fas + chr2R_28_13705001 chr2R_13705001 RAL-850 1108 chr2R 13721170 13721224 chr2R 13721293 13721337 14 128 11.5 11.5 11.5 1.1 167 chr2R 13721170 intron fas + chr2R 13721254 intron fas + chr2R 13721337 intron fas + chr2R_14_13720001 chr2R_13720001 RAL-850 1109 chr2R 13726257 13726265 chr2R 13726439 13726447 5 182 7.5 6.0 6.8 0.6 190 chr2R 13726257 exon fas + chr2R 13726352 intron fas + chr2R 13726447 intron fas + chr2R_5_13725001 chr2R_13725001 RAL-850 1110 chr2R 13727802 13727847 chr2R 13727938 13727953 20 133 8.5 15.0 11.8 1.6 151 chr2R 13727802 intron fas + chr2R 13727878 intron fas + chr2R 13727953 intron fas + chr2R_20_13725001 chr2R_13725001 RAL-850 1111 chr2R 13728095 13728155 chr2R 13735802 13735862 opus 21 7707 5.5 8.0 6.8 2.7 7767 chr2R 13728095 intron fas + chr2R 13731978 intron fas + chr2R 13735862 intron fas + chr2R_21_13730001 chr2R_13730001 RAL-850 1112 chr2R 13764459 13764480 chr2R 13764639 13764660 7 180 7.5 0.0 3.8 1.5 201 chr2R 13764459 intergenic not near genes chr2R 13764560 intergenic not near genes chr2R 13764660 intergenic not near genes chr2R_7_13760001 chr2R_13760001 RAL-850 1113 chr2R 13768939 13769004 chr2R 13769088 13769143 23 147 6.5 11.0 8.8 2.3 204 chr2R 13768939 intergenic not near genes chr2R 13769041 intergenic not near genes chr2R 13769143 intergenic not near genes chr2R_23_13765001 chr2R_13765001 RAL-850 1114 chr2R 13770450 13770518 chr2R 13770597 13770658 7 141 0.0 3.5 1.8 2.5 208 chr2R 13770450 intron Cpr50Ca + chr2R 13770554 intron Cpr50Ca + chr2R 13770658 intron Cpr50Ca + chr2R_7_13770001 chr2R_13770001 RAL-850 1115 chr2R 13839537 13839557 chr2R 13839687 13839707 INE-1 6 150 10.0 3.5 6.8 0.8 170 chr2R 13839537 intergenic CG6347 + chr2R 13839622 intergenic CG6347 +,CG6357 + chr2R 13839707 intergenic CG6347 +,CG6357 + chr2R_6_13835001 chr2R_13835001 RAL-850 1116 chr2R 13854903 13854978 chr2R 13855238 13855272 27 329 5.5 8.5 7.0 3.4 369 chr2R 13854903 exon,5` UTR CG6553 -,CR44367 + chr2R 13855088 exon,5` UTR CG6553 -,CR44367 + chr2R 13855272 exon,5` UTR CG6553 -,CR44367 + chr2R_27_13855001 chr2R_13855001 RAL-850 1117 chr2R 13905567 13905620 chr2R 13907599 13907652 Rt1a 25 2029 13.5 15.5 14.5 1.6 2085 chr2R 13905567 intron shot - chr2R 13906610 intron shot - chr2R 13907652 intron shot - chr2R_25_13905001 chr2R_13905001 RAL-850 1118 chr2R 13924424 13924444 chr2R 13924591 13924611 8 167 15.5 3.5 9.5 0.8 187 chr2R 13924424 intron shot - chr2R 13924518 intron shot - chr2R 13924611 intron shot - chr2R_8_13920001 chr2R_13920001 RAL-850 1119 chr2R 13925825 13925885 chr2R 13926029 13926089 31 204 11.5 0.5 6.0 4.4 264 chr2R 13925825 intron shot - chr2R 13925957 intron shot - chr2R 13926089 intron shot - chr2R_31_13925001 chr2R_13925001 RAL-850 1120 chr2R 13942442 13942463 chr2R 13942573 13942586 7 130 7.0 11.5 9.2 0.7 144 chr2R 13942442 intergenic DJ-1alpha -,shot - chr2R 13942514 intergenic DJ-1alpha -,shot - chr2R 13942586 3` UTR DJ-1alpha - chr2R_7_13940001 chr2R_13940001 RAL-850 1121 chr2R 13995228 13995232 chr2R 13995365 13995369 5 137 1.0 31.0 16.0 0.3 141 chr2R 13995228 intron mam + chr2R 13995298 intron mam + chr2R 13995369 intron mam + chr2R_5_13995001 chr2R_13995001 RAL-850 1122 chr2R 14051395 14051410 chr2R 14051519 14051536 4 128 20.0 18.0 19.0 0.2 141 chr2R 14051395 intron mam + chr2R 14051466 intron mam + chr2R 14051536 intron mam + chr2R_4_14050001 chr2R_14050001 RAL-850 1123 chr2R 14078002 14078089 chr2R 14078151 14078220 12 146 0.0 5.0 2.5 3.4 218 chr2R 14078002 intron Prosap - chr2R 14078111 intron Prosap - chr2R 14078220 intron Prosap - chr2R_12_14075001 chr2R_14075001 RAL-850 1124 chr2R 14141909 14141941 chr2R 14142064 14142096 16 155 16.5 13.5 15.0 1.0 187 chr2R 14141909 intergenic not near genes chr2R 14142002 intergenic not near genes chr2R 14142096 intergenic not near genes chr2R_16_14140001 chr2R_14140001 RAL-850 1125 chr2R 14146379 14146440 chr2R 14146512 14146573 24 132 4.0 7.5 5.8 3.5 194 chr2R 14146379 intergenic not near genes chr2R 14146476 intergenic not near genes chr2R 14146573 intergenic not near genes chr2R_24_14145001 chr2R_14145001 RAL-850 1126 chr2R 14186319 14186338 chr2R 14186433 14186455 10 119 19.0 9.0 14.0 0.7 136 chr2R 14186319 exon CG30069 + chr2R 14186387 exon CG30069 + chr2R 14186455 exon CG30069 + chr2R_10_14185001 chr2R_14185001 RAL-850 1127 chr2R 14186339 14186349 chr2R 14186432 14186481 8 108 18.0 9.0 13.5 0.6 142 chr2R 14186339 exon CG30069 + chr2R 14186410 exon CG30069 + chr2R 14186481 exon CG30069 + chr2R_8_14185001 chr2R_14185001 RAL-850 1128 chr2R 14186355 14186373 chr2R 14186431 14186451 11 100 10.5 8.5 9.5 1.0 96 chr2R 14186355 exon CG30069 + chr2R 14186403 exon CG30069 + chr2R 14186451 exon CG30069 + chr2R_11_14185001 chr2R_14185001 RAL-850 1129 chr2R 14277536 14277602 chr2R 14277668 14277713 27 130 9.0 6.0 7.5 3.2 177 chr2R 14277536 5` UTR Ih + chr2R 14277624 5` UTR Ih + chr2R 14277713 5` UTR Ih + chr2R_27_14275001 chr2R_14275001 RAL-850 1130 chr2R 14285006 14285049 chr2R 14285139 14285181 14 133 13.0 7.5 10.2 1.2 175 chr2R 14285006 intron Ih + chr2R 14285094 intron Ih + chr2R 14285181 intron Ih + chr2R_14_14285001 chr2R_14285001 RAL-850 1131 chr2R 14365273 14365295 chr2R 14365380 14365410 10 119 14.0 11.0 12.5 0.7 137 chr2R 14365273 exon Tfb1 + chr2R 14365342 exon Tfb1 + chr2R 14365410 3` UTR Tfb1 + chr2R_10_14365001 chr2R_14365001 RAL-850 1132 chr2R 14365297 14365325 chr2R 14365377 14365455 26 116 8.5 10.5 9.5 2.5 158 chr2R 14365297 exon Tfb1 + chr2R 14365376 3` UTR Tfb1 + chr2R 14365455 3` UTR Tfb1 + chr2R_26_14365001 chr2R_14365001 RAL-850 1133 chr2R 14394189 14394198 chr2R 14399028 14399037 Doc 4 4839 26.0 7.0 16.5 0.2 4848 chr2R 14394189 intergenic not near genes chr2R 14396613 intergenic not near genes chr2R 14399037 intergenic not near genes chr2R_4_14395001 chr2R_14395001 RAL-850 1134 chr2R 14457434 14457450 chr2R 14457560 14457576 4 126 0.0 4.5 2.2 1.2 142 chr2R 14457434 intron Oaz + chr2R 14457505 intron Oaz + chr2R 14457576 intron Oaz + chr2R_4_14455001 chr2R_14455001 RAL-850 1135 chr2R 14467243 14467316 chr2R 14476445 14476518 roo 29 9199 9.0 7.5 8.2 3.2 9275 chr2R 14467243 intergenic not near genes chr2R 14471880 intergenic not near genes chr2R 14476518 5` UTR CR44462 + chr2R_29_14470001 chr2R_14470001 RAL-850 1136 chr2R 14497347 14497407 chr2R 14498561 14498623 1360 36 1215 9.0 8.5 8.8 3.7 1276 chr2R 14497347 3` UTR Cpsf160 - chr2R 14497985 intron Cpsf160 - chr2R 14498623 3` UTR Cpsf160 - chr2R_36_14495001 chr2R_14495001 RAL-850 1137 chr2R 14514424 14514500 chr2R 14514586 14514642 6 158 4.0 4.5 4.2 1.2 218 chr2R 14514424 intron,exon Cpr51A -,CG30197 + chr2R 14514533 intron,intron Cpr51A -,CG30197 + chr2R 14514642 intron,intron Cpr51A -,CG30197 + chr2R_6_14510001 chr2R_14510001 RAL-850 1138 chr2R 14536168 14536240 chr2R 14536335 14536402 21 165 5.0 4.0 4.5 3.8 234 chr2R 14536168 intron ttv + chr2R 14536285 intron ttv + chr2R 14536402 intron ttv + chr2R_21_14535001 chr2R_14535001 RAL-850 1139 chr2R 14538910 14538982 chr2R 14539036 14539082 23 106 16.5 16.0 16.2 1.3 172 chr2R 14538910 intron ttv + chr2R 14538996 intron ttv + chr2R 14539082 intron ttv + chr2R_23_14535001 chr2R_14535001 RAL-850 1140 chr2R 14542715 14542786 chr2R 14542862 14542933 27 146 6.0 5.5 5.8 4.0 218 chr2R 14542715 intron ttv + chr2R 14542824 intron ttv + chr2R 14542933 intron ttv + chr2R_27_14540001 chr2R_14540001 RAL-850 1141 chr2R 14623820 14623892 chr2R 14623966 14624038 10 146 7.0 8.0 7.5 1.2 218 chr2R 14623820 intron,5` UTR Uhg5 +,snoRNA:Me28S-G2703b + chr2R 14623929 5` UTR Uhg5 + chr2R 14624038 intron,5` UTR Uhg5 +,snoRNA:Me28S-G2703c + chr2R_10_14620001 chr2R_14620001 RAL-850 1142 chr2R 14653839 14653912 chr2R 14653974 14654015 31 130 11.0 10.0 10.5 2.7 176 chr2R 14653839 intergenic not near genes chr2R 14653927 intergenic not near genes chr2R 14654015 intergenic not near genes chr2R_31_14650001 chr2R_14650001 RAL-850 1143 chr2R 14657501 14657505 chr2R 14657628 14657632 5 127 14.5 2.0 8.2 0.5 131 chr2R 14657501 intron Adgf-E - chr2R 14657566 intron Adgf-E - chr2R 14657632 intron Adgf-E - chr2R_5_14655001 chr2R_14655001 RAL-850 1144 chr2R 14707023 14707092 chr2R 14707153 14707222 23 130 3.0 2.0 2.5 6.6 199 chr2R 14707023 intron mspo - chr2R 14707122 intron mspo - chr2R 14707222 intron mspo - chr2R_23_14705001 chr2R_14705001 RAL-850 1145 chr2R 14722265 14722296 chr2R 14722419 14722435 11 152 8.0 16.0 12.0 0.8 170 chr2R 14722265 intergenic not near genes chr2R 14722350 intergenic not near genes chr2R 14722435 intergenic not near genes chr2R_11_14720001 chr2R_14720001 RAL-850 1146 chr2R 14733352 14733424 chr2R 14733482 14733533 16 126 4.0 5.5 4.8 2.8 181 chr2R 14733352 intergenic not near genes chr2R 14733442 intergenic not near genes chr2R 14733533 intergenic not near genes chr2R_16_14730001 chr2R_14730001 RAL-850 1147 chr2R 14766695 14766758 chr2R 14766829 14766892 20 133 5.5 5.0 5.2 3.2 197 chr2R 14766695 intron Spred - chr2R 14766794 intron Spred - chr2R 14766892 intron Spred - chr2R_20_14765001 chr2R_14765001 RAL-850 1148 chr2R 14772726 14772783 chr2R 14772875 14772932 18 146 6.5 6.0 6.2 2.5 206 chr2R 14772726 3` UTR kn - chr2R 14772829 3` UTR kn - chr2R 14772932 3` UTR kn - chr2R_18_14770001 chr2R_14770001 RAL-850 1149 chr2R 14786014 14786056 chr2R 14786157 14786199 19 143 0.0 17.0 8.5 2.0 185 chr2R 14786014 intron kn - chr2R 14786106 intron kn - chr2R 14786199 intron kn - chr2R_19_14785001 chr2R_14785001 RAL-850 1150 chr2R 14799871 14799892 chr2R 14799997 14800018 11 126 2.5 21.5 12.0 0.8 147 chr2R 14799871 intron kn - chr2R 14799944 intron kn - chr2R 14800018 intron kn - chr2R_11_14795001 chr2R_14795001 RAL-850 1151 chr2R 14803427 14803505 chr2R 14803557 14803635 14 130 1.5 3.5 2.5 4.0 208 chr2R 14803427 intron kn - chr2R 14803531 intron kn - chr2R 14803635 intron kn - chr2R_14_14800001 chr2R_14800001 RAL-850 1152 chr2R 14816060 14816138 chr2R 14816206 14816214 31 136 10.0 10.0 10.0 2.8 154 chr2R 14816060 intergenic not near genes chr2R 14816137 intergenic not near genes chr2R 14816214 intergenic not near genes chr2R_31_14815001 chr2R_14815001 RAL-850 1153 chr2R 14826348 14826384 chr2R 14826502 14826538 9 153 6.0 0.5 3.2 2.1 190 chr2R 14826348 intergenic not near genes chr2R 14826443 intergenic not near genes chr2R 14826538 intergenic not near genes chr2R_9_14825001 chr2R_14825001 RAL-850 1154 chr2R 14842340 14842387 chr2R 14842486 14842533 19 146 7.5 0.0 3.8 4.0 193 chr2R 14842340 intergenic NaPi-T - chr2R 14842436 intergenic NaPi-T - chr2R 14842533 intergenic NaPi-T - chr2R_19_14840001 chr2R_14840001 RAL-850 1155 chr2R 14889168 14889241 chr2R 14897826 14897891 Max-element 33 8654 13.5 0.0 6.8 4.2 8723 chr2R 14889168 intergenic Cyp6a8 - chr2R 14893530 intergenic not near genes chr2R 14897891 intergenic not near genes chr2R_33_14890001 chr2R_14890001 RAL-850 1156 chr2R 14911651 14911724 chr2R 14911823 14911897 43 173 9.5 10.0 9.8 4.0 246 chr2R 14911651 intron CG10249 - chr2R 14911774 intron CG10249 - chr2R 14911897 intron CG10249 - chr2R_43_14910001 chr2R_14910001 RAL-850 1157 chr2R 14916504 14916556 chr2R 14916634 14916686 17 130 7.0 1.5 4.2 3.3 182 chr2R 14916504 intron CG10249 - chr2R 14916595 intron CG10249 - chr2R 14916686 intron CG10249 - chr2R_17_14915001 chr2R_14915001 RAL-850 1158 chr2R 14917811 14917878 chr2R 14917944 14918013 36 135 13.0 13.5 13.2 2.5 202 chr2R 14917811 intron CG10249 - chr2R 14917912 intron CG10249 - chr2R 14918013 intron CG10249 - chr2R_36_14915001 chr2R_14915001 RAL-850 1159 chr2R 14919106 14919150 chr2R 14919265 14919309 9 159 10.5 0.0 5.2 1.5 203 chr2R 14919106 intron CG10249 - chr2R 14919208 intron CG10249 - chr2R 14919309 intron CG10249 - chr2R_9_14915001 chr2R_14915001 RAL-850 1160 chr2R 14922096 14922158 chr2R 14922222 14922254 26 122 12.5 11.5 12.0 2.0 158 chr2R 14922096 intron CG10249 - chr2R 14922175 intron CG10249 - chr2R 14922254 intron CG10249 - chr2R_26_14920001 chr2R_14920001 RAL-850 1161 chr2R 14930804 14930858 chr2R 14930947 14931001 7 143 0.0 1.5 0.8 3.9 197 chr2R 14930804 intron CG10253 - chr2R 14930902 intron CG10253 - chr2R 14931001 intron CG10253 - chr2R_7_14930001 chr2R_14930001 RAL-850 1162 chr2R 14934401 14934485 chr2R 14934543 14934627 8 142 3.0 0.0 1.5 3.2 226 chr2R 14934401 intron CG10253 - chr2R 14934514 intron CG10253 - chr2R 14934627 intron CG10253 - chr2R_8_14930001 chr2R_14930001 RAL-850 1163 chr2R 14968059 14968078 chr2R 14968187 14968206 11 128 0.0 3.5 1.8 3.9 147 chr2R 14968059 intron ckn + chr2R 14968132 intron ckn + chr2R 14968206 intron ckn + chr2R_11_14965001 chr2R_14965001 RAL-850 1164 chr2R 14968400 14968434 chr2R 14968532 14968566 10 130 11.5 7.0 9.2 1.0 166 chr2R 14968400 intron ckn + chr2R 14968483 intron ckn + chr2R 14968566 intron ckn + chr2R_10_14965001 chr2R_14965001 RAL-850 1165 chr2R 14968435 14968463 chr2R 14968523 14968550 9 112 6.5 6.5 6.5 1.2 115 chr2R 14968435 intron ckn + chr2R 14968492 intron ckn + chr2R 14968550 intron ckn + chr2R_9_14965001 chr2R_14965001 RAL-850 1166 chr2R 14998533 14998553 chr2R 14998673 14998693 12 140 5.0 13.0 9.0 1.2 160 chr2R 14998533 intergenic not near genes chr2R 14998613 intergenic not near genes chr2R 14998693 intergenic not near genes chr2R_12_14995001 chr2R_14995001 RAL-850 1167 chr2R 15015422 15015436 chr2R 15022894 15022908 mdg1 4 7472 15.0 6.0 10.5 0.3 7486 chr2R 15015422 intron hbs + chr2R 15019165 intron hbs + chr2R 15022908 intron hbs + chr2R_4_15015001 chr2R_15015001 RAL-850 1168 chr2R 15015444 15015483 chr2R 15022885 15022957 mdg1 13 7470 8.0 4.5 6.2 1.8 7513 chr2R 15015444 intron hbs + chr2R 15019200 intron hbs + chr2R 15022957 intron hbs + chr2R_13_15015001 chr2R_15015001 RAL-850 1169 chr2R 15065570 15065614 chr2R 15065699 15065740 14 117 17.0 7.0 12.0 1.1 170 chr2R 15065570 intergenic not near genes chr2R 15065655 intergenic not near genes chr2R 15065740 intergenic not near genes chr2R_14_15065001 chr2R_15065001 RAL-850 1170 chr2R 15065622 15065641 chr2R 15065697 15065769 8 107 8.0 7.0 7.5 0.9 147 chr2R 15065622 intergenic not near genes chr2R 15065696 intergenic not near genes chr2R 15065769 intergenic not near genes chr2R_8_15065001 chr2R_15065001 RAL-850 1171 chr2R 15084938 15084989 chr2R 15092037 15092088 297 14 7096 10.5 8.0 9.2 1.4 7150 chr2R 15084938 intergenic not near genes chr2R 15088513 intergenic not near genes chr2R 15092088 5` UTR CR44457 + chr2R_14_15085001 chr2R_15085001 RAL-850 1172 chr2R 15119271 15119344 chr2R 15127802 15127857 Tirant 23 8523 10.5 5.5 8.0 2.6 8586 chr2R 15119271 intron chn + chr2R 15123564 intron chn + chr2R 15127857 intron chn + chr2R_23_15120001 chr2R_15120001 RAL-850 1173 chr2R 15137923 15137984 chr2R 15138052 15138096 18 130 8.0 5.5 6.8 2.3 173 chr2R 15137923 intron chn + chr2R 15138010 intron chn + chr2R 15138096 intron chn + chr2R_18_15135001 chr2R_15135001 RAL-850 1174 chr2R 15152180 15152254 chr2R 15152355 15152429 29 174 8.5 8.5 8.5 3.1 249 chr2R 15152180 intergenic not near genes chr2R 15152304 intergenic not near genes chr2R 15152429 intergenic not near genes chr2R_29_15150001 chr2R_15150001 RAL-850 1175 chr2R 15160727 15160801 chr2R 15160882 15160947 33 154 8.5 8.0 8.2 3.6 220 chr2R 15160727 intron igl + chr2R 15160837 intron igl + chr2R 15160947 intron igl + chr2R_33_15160001 chr2R_15160001 RAL-850 1176 chr2R 15230389 15230393 chr2R 15230666 15230670 4 277 23.0 0.0 11.5 0.3 281 chr2R 15230389 intron,5` UTR Fs -,CR44370 + chr2R 15230530 intron,5` UTR Fs -,CR44370 + chr2R 15230670 intron,5` UTR Fs -,CR44370 + chr2R_4_15230001 chr2R_15230001 RAL-850 1177 chr2R 15259023 15259082 chr2R 15259157 15259216 25 134 10.5 7.0 8.8 2.6 193 chr2R 15259023 intron ItgalphaPS4 + chr2R 15259120 intron ItgalphaPS4 + chr2R 15259216 intron ItgalphaPS4 + chr2R_25_15255001 chr2R_15255001 RAL-850 1178 chr2R 15296109 15296173 chr2R 15296242 15296306 44 131 6.0 6.5 6.2 6.1 197 chr2R 15296109 intron Trpm - chr2R 15296208 intron Trpm - chr2R 15296306 intron Trpm - chr2R_44_15295001 chr2R_15295001 RAL-850 1179 chr2R 15330173 15330222 chr2R 15330346 15330401 12 180 1.0 6.0 3.5 2.7 228 chr2R 15330173 intergenic CR44371 - chr2R 15330287 intergenic CR44371 - chr2R 15330401 3` UTR CR44371 - chr2R_12_15330001 chr2R_15330001 RAL-850 1180 chr2R 15340650 15340663 chr2R 15349283 15349295 Tirant 10 8633 16.5 8.5 12.5 0.7 8645 chr2R 15340650 intron unc-5 + chr2R 15344972 intron unc-5 + chr2R 15349295 intron unc-5 + chr2R_10_15340001 chr2R_15340001 RAL-850 1181 chr2R 15363615 15363677 chr2R 15363746 15363808 22 120 11.0 12.0 11.5 1.8 193 chr2R 15363615 intron unc-5 + chr2R 15363712 intron unc-5 + chr2R 15363808 intron unc-5 + chr2R_22_15360001 chr2R_15360001 RAL-850 1182 chr2R 15374796 15375048 chr2R 15374929 15375186 10 153 11.5 9.0 10.2 0.9 390 chr2R 15374796 intergenic not near genes chr2R 15374991 intergenic not near genes chr2R 15375186 intergenic not near genes chr2R_10_15370001 chr2R_15370001 RAL-850 1183 chr2R 15572968 15573022 chr2R 15573131 15573172 19 161 8.5 0.0 4.2 3.7 204 chr2R 15572968 3` UTR CG30466 + chr2R 15573070 3` UTR CG30466 + chr2R 15573172 3` UTR CG8204 - chr2R_19_15570001 chr2R_15570001 RAL-850 1184 chr2R 15655982 15656068 chr2R 15656123 15656174 13 138 0.0 4.5 2.2 4.1 192 chr2R 15655982 intron CG42524 + chr2R 15656078 intron CG42524 + chr2R 15656174 intron CG42524 + chr2R_13_15655001 chr2R_15655001 RAL-850 1185 chr2R 15702915 15702929 chr2R 15703042 15703056 7 127 17.5 5.0 11.2 0.6 141 chr2R 15702915 intergenic not near genes chr2R 15702986 intergenic not near genes chr2R 15703056 intergenic not near genes chr2R_7_15700001 chr2R_15700001 RAL-850 1186 chr2R 15702957 15702972 chr2R 15703083 15703098 5 126 11.5 16.0 13.8 0.3 141 chr2R 15702957 intergenic not near genes chr2R 15703028 intergenic not near genes chr2R 15703098 intergenic not near genes chr2R_5_15700001 chr2R_15700001 RAL-850 1187 chr2R 15752819 15752866 chr2R 15752948 15752995 8 129 13.0 11.0 12.0 0.6 176 chr2R 15752819 intron CG30089 + chr2R 15752907 intron CG30089 + chr2R 15752995 intron CG30089 + chr2R_8_15750001 chr2R_15750001 RAL-850 1188 chr2R 15755158 15755247 chr2R 15755300 15755378 27 127 3.5 6.0 4.8 4.7 220 chr2R 15755158 intron CG30089 + chr2R 15755268 intron CG30089 + chr2R 15755378 intron CG30089 + chr2R_27_15755001 chr2R_15755001 RAL-850 1189 chr2R 15828112 15828136 chr2R 15828322 15828346 9 210 4.0 5.5 4.8 1.6 234 chr2R 15828112 intron,intron tun +,Poxn - chr2R 15828229 intron,intron tun +,Poxn - chr2R 15828346 intron,intron tun +,Poxn - chr2R_9_15825001 chr2R_15825001 RAL-850 1190 chr2R 15833496 15833513 chr2R 15833622 15833650 8 136 6.5 7.5 7.0 1.0 154 chr2R 15833496 intron,intron tun +,Poxn - chr2R 15833573 intron,intron tun +,Poxn - chr2R 15833650 intron,intron tun +,Poxn - chr2R_8_15830001 chr2R_15830001 RAL-850 1191 chr2R 15833515 15833544 chr2R 15833617 15833677 11 129 4.5 6.0 5.2 1.8 162 chr2R 15833515 intron,intron tun +,Poxn - chr2R 15833596 intron,intron tun +,Poxn - chr2R 15833677 intron,intron tun +,Poxn - chr2R_11_15830001 chr2R_15830001 RAL-850 1192 chr2R 15845100 15845178 chr2R 15845229 15845307 16 129 8.5 6.5 7.5 1.9 207 chr2R 15845100 intron,intron tun +,CG8249 - chr2R 15845204 intron,intron tun +,CG8249 - chr2R 15845307 intron,exon tun +,CG8249 - chr2R_16_15845001 chr2R_15845001 RAL-850 1193 chr2R 15891768 15891835 chr2R 15891894 15891961 21 126 9.0 6.0 7.5 2.5 193 chr2R 15891768 intron sli - chr2R 15891864 intron sli - chr2R 15891961 intron sli - chr2R_21_15890001 chr2R_15890001 RAL-850 1194 chr2R 15898844 15898907 chr2R 15898992 15899055 26 148 8.5 12.5 10.5 2.3 211 chr2R 15898844 intron sli - chr2R 15898950 intron sli - chr2R 15899055 intron sli - chr2R_26_15895001 chr2R_15895001 RAL-850 1195 chr2R 16061687 16061706 chr2R 16064370 16064389 Burdock 12 2683 16.5 9.0 12.8 0.9 2702 chr2R 16061687 intergenic not near genes chr2R 16063038 intergenic not near genes chr2R 16064389 intergenic not near genes chr2R_12_16060001 chr2R_16060001 RAL-850 1196 chr2R 16387472 16387538 chr2R 16387997 16388031 30 523 5.0 4.5 4.8 5.2 559 chr2R 16387472 intron Sema-2b + chr2R 16387752 intron Sema-2b + chr2R 16388031 intron Sema-2b + chr2R_30_16385001 chr2R_16385001 RAL-850 1197 chr2R 16436635 16436675 chr2R 16436751 16436804 18 119 14.5 10.5 12.5 1.3 169 chr2R 16436635 intergenic not near genes chr2R 16436720 intergenic not near genes chr2R 16436804 intergenic not near genes chr2R_18_16435001 chr2R_16435001 RAL-850 1198 chr2R 16436678 16436696 chr2R 16436749 16436769 5 97 12.5 10.0 11.2 0.4 91 chr2R 16436678 intergenic not near genes chr2R 16436724 intergenic not near genes chr2R 16436769 intergenic not near genes chr2R_5_16435001 chr2R_16435001 RAL-850 1199 chr2R 16538045 16538084 chr2R 16538189 16538228 13 144 8.5 6.5 7.5 1.5 183 chr2R 16538045 intergenic not near genes chr2R 16538136 intergenic not near genes chr2R 16538228 intergenic not near genes chr2R_13_16535001 chr2R_16535001 RAL-850 1200 chr2R 16539600 16539655 chr2R 16544859 16544914 copia 20 5258 9.5 9.0 9.2 2.0 5314 chr2R 16539600 intergenic not near genes chr2R 16542257 intergenic not near genes chr2R 16544914 intergenic not near genes chr2R_20_16540001 chr2R_16540001 RAL-850 1201 chr2R 16571826 16571899 chr2R 16571971 16572044 32 145 3.5 9.5 6.5 4.3 218 chr2R 16571826 intergenic CG4927 + chr2R 16571935 intergenic CG4927 + chr2R 16572044 intergenic CG4927 + chr2R_32_16570001 chr2R_16570001 RAL-850 1202 chr2R 16617065 16617089 chr2R 16617148 16617219 9 125 10.0 14.5 12.2 0.7 154 chr2R 16617065 intron CG5065 + chr2R 16617142 intron CG5065 + chr2R 16617219 intron CG5065 + chr2R_9_16615001 chr2R_16615001 RAL-850 1203 chr2R 16665072 16665146 chr2R 16665206 16665280 23 134 2.5 3.0 2.8 6.1 208 chr2R 16665072 intron Picot - chr2R 16665176 intron Picot - chr2R 16665280 intron Picot - chr2R_23_16665001 chr2R_16665001 RAL-850 1204 chr2R 16708943 16709021 chr2R 16709089 16709145 24 145 4.5 7.5 6.0 3.4 202 chr2R 16708943 intron CG30463 - chr2R 16709044 intron CG30463 - chr2R 16709145 intron CG30463 - chr2R_24_16705001 chr2R_16705001 RAL-850 1205 chr2R 16713054 16713062 chr2R 16713188 16713196 6 134 0.0 16.0 8.0 0.7 142 chr2R 16713054 intron CG30463 - chr2R 16713125 intron CG30463 - chr2R 16713196 intron CG30463 - chr2R_6_16710001 chr2R_16710001 RAL-850 1206 chr2R 16714502 16714569 chr2R 16714631 16714698 24 129 6.0 1.0 3.5 5.3 196 chr2R 16714502 intron CG30463 - chr2R 16714600 intron CG30463 - chr2R 16714698 intron CG30463 - chr2R_24_16710001 chr2R_16710001 RAL-850 1207 chr2R 16723878 16723939 chr2R 16724008 16724069 16 130 8.5 5.5 7.0 2.0 191 chr2R 16723878 intron CG30463 - chr2R 16723974 intron CG30463 - chr2R 16724069 intron CG30463 - chr2R_16_16720001 chr2R_16720001 RAL-850 1208 chr2R 16726635 16726690 chr2R 16726784 16726839 19 148 4.0 9.0 6.5 2.5 204 chr2R 16726635 intron CG30463 - chr2R 16726737 intron CG30463 - chr2R 16726839 intron CG30463 - chr2R_19_16725001 chr2R_16725001 RAL-850 1209 chr2R 16739433 16739445 chr2R 16739566 16739578 5 133 15.0 0.0 7.5 0.6 145 chr2R 16739433 intergenic not near genes chr2R 16739506 intergenic not near genes chr2R 16739578 intergenic not near genes chr2R_5_16735001 chr2R_16735001 RAL-850 1210 chr2R 16933297 16933354 chr2R 16933446 16933503 17 149 5.0 8.5 6.8 2.2 206 chr2R 16933297 intron Pkc53E + chr2R 16933400 intron Pkc53E + chr2R 16933503 intron Pkc53E + chr2R_17_16930001 chr2R_16930001 RAL-850 1211 chr2R 16966349 16966397 chr2R 16966515 16966563 18 166 11.0 6.0 8.5 1.9 214 chr2R 16966349 intergenic not near genes chr2R 16966456 intergenic not near genes chr2R 16966563 intergenic not near genes chr2R_18_16965001 chr2R_16965001 RAL-850 1212 chr2R 16966399 16966411 chr2R 16966565 16966577 5 166 8.0 12.5 10.2 0.4 178 chr2R 16966399 intergenic not near genes chr2R 16966488 intergenic not near genes chr2R 16966577 intergenic not near genes chr2R_5_16965001 chr2R_16965001 RAL-850 1213 chr2R 16989095 16989177 chr2R 16989222 16989304 30 126 7.0 5.5 6.2 4.2 209 chr2R 16989095 intron Cbp53E + chr2R 16989200 intron Cbp53E + chr2R 16989304 intron Cbp53E + chr2R_30_16985001 chr2R_16985001 RAL-850 1214 chr2R 17020423 17020501 chr2R 17020549 17020602 45 124 13.5 11.0 12.2 3.4 179 chr2R 17020423 intron Ark + chr2R 17020512 intron Ark + chr2R 17020602 intron Ark + chr2R_45_17020001 chr2R_17020001 RAL-850 1215 chr2R 17077950 17077982 chr2R 17078077 17078109 17 127 5.0 0.0 2.5 4.9 159 chr2R 17077950 intron CG30460 - chr2R 17078030 intron CG30460 - chr2R 17078109 intron CG30460 - chr2R_17_17075001 chr2R_17075001 RAL-850 1216 chr2R 17079012 17079078 chr2R 17079144 17079209 13 131 5.5 5.5 5.5 2.0 197 chr2R 17079012 intron CG30460 - chr2R 17079110 intron CG30460 - chr2R 17079209 intron CG30460 - chr2R_13_17075001 chr2R_17075001 RAL-850 1217 chr2R 17079079 17079086 chr2R 17079140 17079217 5 117 6.0 5.0 5.5 0.8 138 chr2R 17079079 intron CG30460 - chr2R 17079148 intron CG30460 - chr2R 17079217 intron CG30460 - chr2R_5_17075001 chr2R_17075001 RAL-850 1218 chr2R 17098617 17098631 chr2R 17098756 17098770 4 138 17.5 16.0 16.8 0.2 153 chr2R 17098617 intergenic GstS1 - chr2R 17098694 intergenic GstS1 - chr2R 17098770 intergenic GstS1 - chr2R_4_17095001 chr2R_17095001 RAL-850 1219 chr2R 17098632 17098649 chr2R 17098749 17098788 8 135 14.0 14.0 14.0 0.5 156 chr2R 17098632 intergenic GstS1 - chr2R 17098710 intergenic GstS1 - chr2R 17098788 intergenic GstS1 - chr2R_8_17095001 chr2R_17095001 RAL-850 1220 chr2R 17112454 17112474 chr2R 17112582 17112602 12 128 6.5 11.0 8.8 1.2 148 chr2R 17112454 intron CG15611 + chr2R 17112528 intron CG15611 + chr2R 17112602 intron CG15611 + chr2R_12_17110001 chr2R_17110001 RAL-850 1221 chr2R 17147209 17147259 chr2R 17152287 17152340 jockey 14 5079 8.0 13.0 10.5 1.2 5131 chr2R 17147209 intergenic not near genes chr2R 17149774 intergenic not near genes chr2R 17152340 intergenic not near genes chr2R_14_17145001 chr2R_17145001 RAL-850 1222 chr2R 17161304 17161364 chr2R 17161561 17161618 14 256 9.0 2.0 5.5 2.2 314 chr2R 17161304 intergenic CG30457 - chr2R 17161461 intergenic not near genes chr2R 17161618 intergenic not near genes chr2R_14_17160001 chr2R_17160001 RAL-850 1223 chr2R 17176369 17176384 chr2R 17182609 17182624 diver 7 6240 0.0 20.0 10.0 0.6 6255 chr2R 17176369 intergenic not near genes chr2R 17179496 intergenic not near genes chr2R 17182624 intergenic not near genes chr2R_7_17175001 chr2R_17175001 RAL-850 1224 chr2R 17236465 17236518 chr2R 17241719 17241772 copia 23 5252 9.5 7.0 8.2 2.5 5307 chr2R 17236465 intron mbl + chr2R 17239118 intron mbl + chr2R 17241772 intron mbl + chr2R_23_17235001 chr2R_17235001 RAL-850 1225 chr2R 17299743 17299773 chr2R 17299965 17300019 8 229 8.0 7.5 7.8 0.9 276 chr2R 17299743 intron mbl + chr2R 17299881 intron mbl + chr2R 17300019 intron mbl + chr2R_8_17295001 chr2R_17295001 RAL-850 1226 chr2R 17314118 17314131 chr2R 17314251 17314270 8 137 4.5 13.0 8.8 0.8 152 chr2R 17314118 intron mbl + chr2R 17314194 intron mbl + chr2R 17314270 intron mbl + chr2R_8_17310001 chr2R_17310001 RAL-850 1227 chr2R 17314133 17314167 chr2R 17314246 17314306 12 134 4.5 11.5 8.0 1.3 173 chr2R 17314133 intron mbl + chr2R 17314220 intron mbl + chr2R 17314306 intron mbl + chr2R_12_17310001 chr2R_17310001 RAL-850 1228 chr2R 17374817 17374870 chr2R 17374947 17375000 20 130 7.0 7.5 7.2 2.4 183 chr2R 17374817 3` UTR mbl + chr2R 17374908 3` UTR mbl + chr2R 17375000 3` UTR mbl + chr2R_20_17370001 chr2R_17370001 RAL-850 1229 chr2R 17389227 17389280 chr2R 17389363 17389406 24 136 10.5 6.5 8.5 2.5 179 chr2R 17389227 intergenic CR44344 - chr2R 17389316 intergenic CR44344 - chr2R 17389406 intergenic CR44344 - chr2R_24_17385001 chr2R_17385001 RAL-850 1230 chr2R 17389282 17389303 chr2R 17389361 17389418 11 111 6.5 6.0 6.2 1.5 136 chr2R 17389282 intergenic CR44344 - chr2R 17389350 intergenic CR44344 - chr2R 17389418 intergenic CR44344 - chr2R_11_17385001 chr2R_17385001 RAL-850 1231 chr2R 17458961 17459027 chr2R 17459096 17459162 19 135 13.5 9.5 11.5 1.5 201 chr2R 17458961 intron CG14478 + chr2R 17459062 intron CG14478 + chr2R 17459162 intron CG14478 + chr2R_19_17455001 chr2R_17455001 RAL-850 1232 chr2R 17470288 17470355 chr2R 17470423 17470489 11 133 3.0 0.0 1.5 4.4 201 chr2R 17470288 intron qkr54B + chr2R 17470388 intron qkr54B + chr2R 17470489 intron qkr54B + chr2R_11_17470001 chr2R_17470001 RAL-850 1233 chr2R 17478612 17478681 chr2R 17478743 17478812 32 130 5.5 7.5 6.5 4.3 200 chr2R 17478612 3` UTR,intron CG43110 -,veil + chr2R 17478712 3` UTR,intron CG43110 -,veil + chr2R 17478812 3` UTR,intron CG43110 -,veil + chr2R_32_17475001 chr2R_17475001 RAL-850 1234 chr2R 17485876 17485944 chr2R 17490688 17490754 F-element 21 4811 9.5 12.0 10.8 1.8 4878 chr2R 17485876 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488315 intron NT5E-2 + chr2R 17490754 intron NT5E-2 + chr2R_21_17485001 chr2R_17485001 RAL-850 1235 chr2R 17637781 17637860 chr2R 17637911 17637990 6 130 6.5 7.5 7.0 0.8 209 chr2R 17637781 intron CG10936 - chr2R 17637886 intron CG10936 - chr2R 17637990 intron CG10936 - chr2R_6_17635001 chr2R_17635001 RAL-850 1236 chr2R 17641071 17641141 chr2R 17641228 17641298 27 154 10.0 9.0 9.5 2.6 227 chr2R 17641071 intergenic not near genes chr2R 17641184 intergenic not near genes chr2R 17641298 intergenic not near genes chr2R_27_17640001 chr2R_17640001 RAL-850 1237 chr2R 17679586 17679600 chr2R 17679763 17679777 5 177 2.5 4.0 3.2 1.2 191 chr2R 17679586 intron Sema-1b - chr2R 17679682 intron Sema-1b - chr2R 17679777 intron Sema-1b - chr2R_5_17675001 chr2R_17675001 RAL-850 1238 chr2R 17708355 17708404 chr2R 17708486 17708535 9 131 6.0 8.5 7.2 1.1 180 chr2R 17708355 intron CG6424 - chr2R 17708445 intron CG6424 - chr2R 17708535 intron CG6424 - chr2R_9_17705001 chr2R_17705001 RAL-850 1239 chr2R 17722059 17722075 chr2R 17722189 17722205 6 130 8.0 23.5 15.8 0.4 146 chr2R 17722059 intergenic CG10934 + chr2R 17722132 intergenic CG10934 + chr2R 17722205 intergenic CG10934 + chr2R_6_17720001 chr2R_17720001 RAL-850 1240 chr2R 17782322 17782386 chr2R 17783575 17783639 pogo 14 1253 3.0 6.5 4.8 2.4 1317 chr2R 17782322 intergenic CG33981 -,fab1 - chr2R 17782980 intergenic not near genes chr2R 17783639 intergenic mir-31a - chr2R_14_17780001 chr2R_17780001 RAL-850 1241 chr2R 17783982 17784052 chr2R 17784273 17784313 pogo 41 286 14.0 13.0 13.5 2.8 331 chr2R 17783982 intergenic mir-31a - chr2R 17784148 intergenic mir-31a - chr2R 17784313 intergenic mir-31a - chr2R_41_17780001 chr2R_17780001 RAL-850 1242 chr2R 17918121 17918155 chr2R 17918248 17918281 16 125 16.0 0.5 8.2 1.7 160 chr2R 17918121 intron Elk + chr2R 17918201 intron Elk + chr2R 17918281 intron Elk + chr2R_16_17915001 chr2R_17915001 RAL-850 1243 chr2R 17921404 17921459 chr2R 17921536 17921591 17 132 0.5 8.5 4.5 3.1 187 chr2R 17921404 intron Elk + chr2R 17921498 intron Elk + chr2R 17921591 intron Elk + chr2R_17_17920001 chr2R_17920001 RAL-850 1244 chr2R 17963282 17963284 chr2R 17963465 17963467 5 183 24.0 15.5 19.8 0.2 185 chr2R 17963282 intergenic not near genes chr2R 17963374 intergenic not near genes chr2R 17963467 intergenic not near genes chr2R_5_17960001 chr2R_17960001 RAL-850 1245 chr2R 17966109 17966117 chr2R 17966240 17966248 4 131 20.5 14.0 17.2 0.2 139 chr2R 17966109 intergenic not near genes chr2R 17966178 intergenic not near genes chr2R 17966248 intergenic not near genes chr2R_4_17965001 chr2R_17965001 RAL-850 1246 chr2R 17966127 17966168 chr2R 17966233 17966272 18 121 9.5 12.5 11.0 1.5 145 chr2R 17966127 intergenic not near genes chr2R 17966200 intergenic not near genes chr2R 17966272 intergenic not near genes chr2R_18_17965001 chr2R_17965001 RAL-850 1247 chr2R 17982875 17982953 chr2R 17983010 17983074 32 133 6.5 10.0 8.2 3.5 199 chr2R 17982875 intron dpr13 - chr2R 17982974 intron dpr13 - chr2R 17983074 intron dpr13 - chr2R_32_17980001 chr2R_17980001 RAL-850 1248 chr2R 17990729 17990798 chr2R 17990928 17990987 30 198 5.0 4.5 4.8 5.2 258 chr2R 17990729 intron dpr13 - chr2R 17990858 intron dpr13 - chr2R 17990987 intron dpr13 - chr2R_30_17990001 chr2R_17990001 RAL-850 1249 chr2R 18023121 18023191 chr2R 18023252 18023327 42 134 18.0 8.0 13.0 3.0 206 chr2R 18023121 intergenic not near genes chr2R 18023224 intergenic not near genes chr2R 18023327 intergenic not near genes chr2R_42_18020001 chr2R_18020001 RAL-850 1250 chr2R 18045626 18045697 chr2R 18046028 18046099 jockey 19 402 7.5 6.0 6.8 2.4 473 chr2R 18045626 intergenic not near genes chr2R 18045862 intergenic not near genes chr2R 18046099 intergenic CG5767 - chr2R_19_18045001 chr2R_18045001 RAL-850 1251 chr2R 18111009 18111081 chr2R 18111374 18111427 24 349 64.0 55.5 59.8 0.4 418 chr2R 18111009 intergenic not near genes chr2R 18111218 intergenic not near genes chr2R 18111427 intergenic not near genes chr2R_24_18110001 chr2R_18110001 RAL-850 1252 chr2R 18111647 18111698 chr2R 18115565 18115616 F-element 19 3918 9.0 10.5 9.8 1.8 3969 chr2R 18111647 intergenic not near genes chr2R 18113632 intergenic not near genes chr2R 18115616 intergenic not near genes chr2R_19_18110001 chr2R_18110001 RAL-850 1253 chr2R 18174672 18174747 chr2R 18174803 18174878 27 131 10.0 7.5 8.8 2.8 206 chr2R 18174672 3` UTR CG10916 + chr2R 18174775 3` UTR CG10916 + chr2R 18174878 3` UTR CG10916 + chr2R_27_18170001 chr2R_18170001 RAL-850 1254 chr2R 18187422 18187496 chr2R 18187549 18187623 38 126 3.5 9.5 6.5 5.1 201 chr2R 18187422 intron CG33958 - chr2R 18187522 intron CG33958 - chr2R 18187623 intron CG33958 - chr2R_38_18185001 chr2R_18185001 RAL-850 1255 chr2R 18289381 18289453 chr2R 18289533 18289560 25 149 6.5 6.0 6.2 3.5 179 chr2R 18289381 intron,intron sbb -,CG14502 + chr2R 18289470 intron,intron sbb -,CG14502 + chr2R 18289560 exon,intron sbb -,CG14502 + chr2R_25_18285001 chr2R_18285001 RAL-850 1256 chr2R 18308240 18308311 chr2R 18308396 18308467 36 154 7.5 7.5 7.5 4.2 227 chr2R 18308240 intron sbb - chr2R 18308354 intron sbb - chr2R 18308467 intron sbb - chr2R_36_18305001 chr2R_18305001 RAL-850 1257 chr2R 18318333 18318338 chr2R 18318464 18318469 6 131 9.0 0.0 4.5 1.1 136 chr2R 18318333 intron sbb - chr2R 18318401 intron sbb - chr2R 18318469 intron sbb - chr2R_6_18315001 chr2R_18315001 RAL-850 1258 chr2R 18320030 18320080 chr2R 18320193 18320246 11 165 6.0 0.0 3.0 2.8 216 chr2R 18320030 intron sbb - chr2R 18320138 intron sbb - chr2R 18320246 intron sbb - chr2R_11_18320001 chr2R_18320001 RAL-850 1259 chr2R 18322164 18322203 chr2R 18322289 18322321 10 122 9.0 7.0 8.0 1.1 157 chr2R 18322164 intron sbb - chr2R 18322242 intron sbb - chr2R 18322321 intron sbb - chr2R_10_18320001 chr2R_18320001 RAL-850 1260 chr2R 18322207 18322213 chr2R 18322284 18322344 5 119 7.5 6.0 6.8 0.6 137 chr2R 18322207 intron sbb - chr2R 18322276 intron sbb - chr2R 18322344 intron sbb - chr2R_5_18320001 chr2R_18320001 RAL-850 1261 chr2R 18358350 18358409 chr2R 18372612 18372671 roo 23 14262 13.0 12.5 12.8 1.7 14321 chr2R 18358350 intergenic not near genes chr2R 18365510 intergenic not near genes chr2R 18372671 intergenic not near genes chr2R_23_18365001 chr2R_18365001 RAL-850 1262 chr2R 18376685 18376760 chr2R 18376825 18376874 18 136 5.0 3.5 4.2 3.5 189 chr2R 18376685 intergenic not near genes chr2R 18376780 intergenic not near genes chr2R 18376874 intergenic not near genes chr2R_18_18375001 chr2R_18375001 RAL-850 1263 chr2R 18398680 18398683 chr2R 18402511 18402520 5 3832 49.5 19.5 34.5 0.1 3840 chr2R 18398680 exon GstE1 + chr2R 18400600 intergenic GstE3 +,GstE2 + chr2R 18402520 intergenic not near genes chr2R_5_18400001 chr2R_18400001 RAL-850 1264 chr2R 18405756 18405783 chr2R 18405886 18405913 10 130 8.0 16.5 12.2 0.8 157 chr2R 18405756 intergenic GstE6 +,GstE5 + chr2R 18405834 intergenic GstE6 +,GstE5 + chr2R 18405913 intergenic GstE6 + chr2R_10_18405001 chr2R_18405001 RAL-850 1265 chr2R 18466255 18466329 chr2R 18466398 18466472 34 143 8.5 5.0 6.8 4.4 217 chr2R 18466255 intron CG30116 - chr2R 18466364 intron CG30116 - chr2R 18466472 intron CG30116 - chr2R_34_18465001 chr2R_18465001 RAL-850 1266 chr2R 18487788 18487828 chr2R 18495289 18495329 blood 15 7500 9.0 7.0 8.0 1.7 7541 chr2R 18487788 intron CG30116 - chr2R 18491558 intron CG30116 - chr2R 18495329 intron CG30116 - chr2R_15_18490001 chr2R_18490001 RAL-850 1267 chr2R 18502286 18502360 chr2R 18502714 18502751 25 415 8.5 13.0 10.8 2.1 465 chr2R 18502286 intergenic not near genes chr2R 18502518 intergenic not near genes chr2R 18502751 intergenic not near genes chr2R_25_18500001 chr2R_18500001 RAL-850 1268 chr2R 18511533 18511615 chr2R 18511673 18511751 25 136 2.5 5.0 3.8 5.2 218 chr2R 18511533 intergenic not near genes chr2R 18511642 intergenic not near genes chr2R 18511751 intergenic not near genes chr2R_25_18510001 chr2R_18510001 RAL-850 1269 chr2R 18575750 18575810 chr2R 18581988 18582006 3S18 10 6232 13.0 9.5 11.2 0.8 6256 chr2R 18575750 intron GEFmeso - chr2R 18578878 intron GEFmeso - chr2R 18582006 intron GEFmeso - chr2R_10_18575001 chr2R_18575001 RAL-850 1270 chr2R 18575811 18575825 chr2R 18581983 18582063 3S18 26 6211 10.0 9.0 9.5 2.5 6252 chr2R 18575811 intron GEFmeso - chr2R 18578937 intron GEFmeso - chr2R 18582063 intron GEFmeso - chr2R_26_18575001 chr2R_18575001 RAL-850 1271 chr2R 18590822 18590901 chr2R 18600024 18600063 roo 28 9196 7.5 12.0 9.8 2.6 9241 chr2R 18590822 intron GEFmeso - chr2R 18595442 intron GEFmeso - chr2R 18600063 intron GEFmeso - chr2R_28_18595001 chr2R_18595001 RAL-850 1272 chr2R 18646384 18646434 chr2R 18646579 18646629 31 193 12.0 17.5 14.8 2.0 245 chr2R 18646384 intron SP2637 - chr2R 18646506 intron SP2637 - chr2R 18646629 intron SP2637 - chr2R_31_18645001 chr2R_18645001 RAL-850 1273 chr2R 18692853 18692919 chr2R 18692990 18693055 25 136 6.0 3.5 4.8 4.3 202 chr2R 18692853 exon Sik3 + chr2R 18692954 intron Sik3 + chr2R 18693055 intron Sik3 + chr2R_25_18690001 chr2R_18690001 RAL-850 1274 chr2R 18735296 18735346 chr2R 18735426 18735455 19 116 8.0 10.5 9.2 1.9 159 chr2R 18735296 intron Hs3st-A + chr2R 18735376 intron Hs3st-A + chr2R 18735455 intron Hs3st-A + chr2R_19_18735001 chr2R_18735001 RAL-850 1275 chr2R 18736741 18736780 chr2R 18736916 18736929 12 171 8.5 7.5 8.0 1.3 188 chr2R 18736741 intron Hs3st-A + chr2R 18736835 intron Hs3st-A + chr2R 18736929 intron Hs3st-A + chr2R_12_18735001 chr2R_18735001 RAL-850 1276 chr2R 18738169 18738236 chr2R 18738295 18738362 18 126 1.0 7.5 4.2 3.5 193 chr2R 18738169 intron Hs3st-A + chr2R 18738266 intron Hs3st-A + chr2R 18738362 intron Hs3st-A + chr2R_18_18735001 chr2R_18735001 RAL-850 1277 chr2R 18769592 18769609 chr2R 18769749 18769766 7 157 18.0 18.0 18.0 0.4 174 chr2R 18769592 intron Mctp + chr2R 18769679 intron Mctp + chr2R 18769766 intron Mctp + chr2R_7_18765001 chr2R_18765001 RAL-850 1278 chr2R 18815220 18815290 chr2R 18815398 18815465 25 184 5.0 2.5 3.8 5.2 245 chr2R 18815220 5` UTR,5` UTR CG15096 -,CR43418 + chr2R 18815342 5` UTR,5` UTR CG15096 -,CR43418 + chr2R 18815465 5` UTR,5` UTR CG15096 -,CR43418 + chr2R_25_18815001 chr2R_18815001 RAL-850 1279 chr2R 18953118 18953187 chr2R 18953255 18953324 20 136 5.0 7.0 6.0 2.9 206 chr2R 18953118 intron sano + chr2R 18953221 intron sano + chr2R 18953324 intron sano + chr2R_20_18950001 chr2R_18950001 RAL-850 1280 chr2R 19012897 19012967 chr2R 19013041 19013111 27 143 3.0 10.0 6.5 3.6 214 chr2R 19012897 intergenic not near genes chr2R 19013004 intergenic not near genes chr2R 19013111 intergenic not near genes chr2R_27_19010001 chr2R_19010001 RAL-850 1281 chr2R 19026000 19026013 chr2R 19026190 19026203 7 190 25.0 10.5 17.8 0.4 203 chr2R 19026000 exon 5-HT1B - chr2R 19026102 intron 5-HT1B - chr2R 19026203 intron 5-HT1B - chr2R_7_19025001 chr2R_19025001 RAL-850 1282 chr2R 19026015 19026053 chr2R 19026205 19026243 15 190 18.0 16.0 17.0 0.8 228 chr2R 19026015 exon 5-HT1B - chr2R 19026129 intron 5-HT1B - chr2R 19026243 intron 5-HT1B - chr2R_15_19025001 chr2R_19025001 RAL-850 1283 chr2R 19042646 19042692 chr2R 19042781 19042827 9 127 24.0 10.5 17.2 0.5 181 chr2R 19042646 intergenic not near genes chr2R 19042736 intergenic not near genes chr2R 19042827 intergenic not near genes chr2R_9_19040001 chr2R_19040001 RAL-850 1284 chr2R 19103360 19103426 chr2R 19103500 19103558 14 133 4.5 4.0 4.2 2.7 198 chr2R 19103360 intron 5-HT1A + chr2R 19103459 intron 5-HT1A + chr2R 19103558 intron 5-HT1A + chr2R_14_19100001 chr2R_19100001 RAL-850 1285 chr2R 19168691 19168768 chr2R 19168822 19168901 20 132 6.5 6.0 6.2 2.8 210 chr2R 19168691 intron CG10737 + chr2R 19168796 intron CG10737 + chr2R 19168901 intron CG10737 + chr2R_20_19165001 chr2R_19165001 RAL-850 1286 chr2R 19202951 19202953 chr2R 19203078 19203080 4 127 7.5 5.0 6.2 0.6 129 chr2R 19202951 intron hppy + chr2R 19203016 intron hppy + chr2R 19203080 intron hppy + chr2R_4_19200001 chr2R_19200001 RAL-850 1287 chr2R 19203321 19203353 chr2R 19203710 19203750 19 374 33.5 56.0 44.8 0.4 429 chr2R 19203321 intron hppy + chr2R 19203536 intron hppy + chr2R 19203750 intron hppy + chr2R_19_19200001 chr2R_19200001 RAL-850 1288 chr2R 19234799 19234820 chr2R 19234931 19234952 9 132 16.5 8.0 12.2 0.7 153 chr2R 19234799 intron cora + chr2R 19234876 intron cora + chr2R 19234952 intron cora + chr2R_9_19230001 chr2R_19230001 RAL-850 1289 chr2R 19234825 19234863 chr2R 19234927 19234995 14 129 9.0 7.0 8.0 1.6 170 chr2R 19234825 intron cora + chr2R 19234910 intron cora + chr2R 19234995 intron cora + chr2R_14_19230001 chr2R_19230001 RAL-850 1290 chr2R 19281467 19281550 chr2R 19281597 19281654 25 128 11.0 9.0 10.0 2.3 187 chr2R 19281467 3` UTR CG11906 - chr2R 19281560 3` UTR CG11906 - chr2R 19281654 exon CG11906 - chr2R_25_19280001 chr2R_19280001 RAL-850 1291 chr2R 19300917 19300991 chr2R 19301049 19301125 25 134 0.0 7.0 3.5 5.6 208 chr2R 19300917 intron Tab2 + chr2R 19301021 intron Tab2 + chr2R 19301125 intron Tab2 + chr2R_25_19300001 chr2R_19300001 RAL-850 1292 chr2R 19363136 19363215 chr2R 19363262 19363341 15 126 1.0 0.0 0.5 10.0 205 chr2R 19363136 intergenic not near genes chr2R 19363238 intergenic CG10051 + chr2R 19363341 intergenic CG10051 + chr2R_15_19360001 chr2R_19360001 RAL-850 1293 chr2R 19385231 19385312 chr2R 19385564 19385648 21 334 4.5 2.5 3.5 4.7 417 chr2R 19385231 intergenic CG10073 + chr2R 19385440 intergenic CG10073 +,CG10081 + chr2R 19385648 intergenic CG10081 + chr2R_21_19385001 chr2R_19385001 RAL-850 1294 chr2R 19531935 19531956 chr2R 19532074 19532094 8 137 12.5 14.5 13.5 0.6 159 chr2R 19531935 intron sm - chr2R 19532014 intron sm - chr2R 19532094 intron sm - chr2R_8_19530001 chr2R_19530001 RAL-850 1295 chr2R 19531959 19531973 chr2R 19532073 19532111 7 129 10.0 14.0 12.0 0.5 152 chr2R 19531959 intron sm - chr2R 19532035 intron sm - chr2R 19532111 intron sm - chr2R_7_19530001 chr2R_19530001 RAL-850 1296 chr2R 19536425 19536494 chr2R 19536557 19536626 34 132 12.0 11.5 11.8 2.7 201 chr2R 19536425 intron sm - chr2R 19536526 intron sm - chr2R 19536626 intron sm - chr2R_34_19535001 chr2R_19535001 RAL-850 1297 chr2R 19549584 19549643 chr2R 19549715 19549774 20 131 8.0 0.0 4.0 4.0 190 chr2R 19549584 intron sm - chr2R 19549679 intron sm - chr2R 19549774 intron sm - chr2R_20_19545001 chr2R_19545001 RAL-850 1298 chr2R 19575522 19575579 chr2R 19575650 19575707 25 128 7.0 4.5 5.8 3.7 185 chr2R 19575522 intron sm - chr2R 19575614 intron sm - chr2R 19575707 intron sm - chr2R_25_19575001 chr2R_19575001 RAL-850 1299 chr2R 19603918 19604000 chr2R 19604057 19604134 16 138 3.0 6.5 4.8 2.8 216 chr2R 19603918 intron sm - chr2R 19604026 intron sm - chr2R 19604134 intron sm - chr2R_16_19600001 chr2R_19600001 RAL-850 1300 chr2R 19652839 19652866 chr2R 19653234 19653281 11 409 15.0 10.5 12.8 0.8 442 chr2R 19652839 3` UTR CR44212 - chr2R 19653060 intergenic CR44212 -,CR44213 + chr2R 19653281 intergenic CR44213 +,CR44212 - chr2R_11_19650001 chr2R_19650001 RAL-850 1301 chr2R 19652867 19652880 chr2R 19653224 19653290 7 397 9.5 10.0 9.8 0.6 423 chr2R 19652867 3` UTR CR44212 - chr2R 19653078 intergenic CR44212 -,CR44213 + chr2R 19653290 intergenic CR44213 +,CR44212 - chr2R_7_19650001 chr2R_19650001 RAL-850 1302 chr2R 19715813 19715855 chr2R 19723332 19723373 blood 14 7518 11.0 14.0 12.5 1.0 7560 chr2R 19715813 intergenic not near genes chr2R 19719593 intergenic not near genes chr2R 19723373 intergenic not near genes chr2R_14_19715001 chr2R_19715001 RAL-850 1303 chr2R 19776555 19776565 chr2R 19779923 19779938 jockey 8 3372 25.5 11.0 18.2 0.4 3383 chr2R 19776555 intergenic not near genes chr2R 19778246 intergenic not near genes chr2R 19779938 intergenic not near genes chr2R_8_19775001 chr2R_19775001 RAL-850 1304 chr2R 19776567 19776613 chr2R 19779919 19779986 jockey 26 3370 16.5 10.0 13.2 1.8 3419 chr2R 19776567 intergenic not near genes chr2R 19778276 intergenic not near genes chr2R 19779986 intergenic not near genes chr2R_26_19775001 chr2R_19775001 RAL-850 1305 chr2R 19810625 19810638 chr2R 19810758 19810770 7 132 12.0 9.0 10.5 0.6 145 chr2R 19810625 intergenic not near genes chr2R 19810698 intergenic not near genes chr2R 19810770 intergenic not near genes chr2R_7_19810001 chr2R_19810001 RAL-850 1306 chr2R 19810639 19810658 chr2R 19810757 19810791 9 129 6.5 8.5 7.5 1.1 152 chr2R 19810639 intergenic not near genes chr2R 19810715 intergenic not near genes chr2R 19810791 intergenic not near genes chr2R_9_19810001 chr2R_19810001 RAL-850 1307 chr2R 19914809 19914862 chr2R 19922271 19922319 mdg1 10 7462 8.5 10.5 9.5 1.0 7510 chr2R 19914809 intergenic not near genes chr2R 19918564 intergenic not near genes chr2R 19922319 intergenic not near genes chr2R_10_19915001 chr2R_19915001 RAL-850 1308 chr2R 19957383 19957459 chr2R 19962636 19962704 copia 12 5246 4.0 5.5 4.8 2.1 5321 chr2R 19957383 intergenic CG44623 + chr2R 19960044 intergenic not near genes chr2R 19962704 intergenic not near genes chr2R_12_19960001 chr2R_19960001 RAL-850 1309 chr2R 20009454 20009517 chr2R 20009583 20009646 30 128 9.0 11.0 10.0 2.7 192 chr2R 20009454 intergenic not near genes chr2R 20009550 intergenic not near genes chr2R 20009646 intergenic not near genes chr2R_30_20005001 chr2R_20005001 RAL-850 1310 chr2R 20009518 20009526 chr2R 20009579 20009655 8 117 9.5 11.0 10.2 0.7 137 chr2R 20009518 intergenic not near genes chr2R 20009586 intergenic not near genes chr2R 20009655 intergenic not near genes chr2R_8_20005001 chr2R_20005001 RAL-850 1311 chr2R 20069190 20069246 chr2R 20071878 20071928 opus 17 2687 0.0 8.5 4.2 3.3 2738 chr2R 20069190 intergenic not near genes chr2R 20070559 intergenic not near genes chr2R 20071928 intergenic not near genes chr2R_17_20070001 chr2R_20070001 RAL-850 1312 chr2R 20080602 20080605 chr2R 20080729 20080732 4 127 0.0 18.0 9.0 0.4 130 chr2R 20080602 intergenic not near genes chr2R 20080667 intergenic not near genes chr2R 20080732 intergenic not near genes chr2R_4_20080001 chr2R_20080001 RAL-850 1313 chr2R 20080608 20080623 chr2R 20080720 20080750 7 125 2.0 17.0 9.5 0.7 142 chr2R 20080608 intergenic not near genes chr2R 20080679 intergenic not near genes chr2R 20080750 intergenic not near genes chr2R_7_20080001 chr2R_20080001 RAL-850 1314 chr2R 20125724 20125745 chr2R 20125850 20125871 11 125 8.0 21.0 14.5 0.7 147 chr2R 20125724 intergenic not near genes chr2R 20125798 intergenic not near genes chr2R 20125871 intergenic not near genes chr2R_11_20125001 chr2R_20125001 RAL-850 1315 chr2R 20206977 20207015 chr2R 20207083 20207089 18 114 16.5 10.5 13.5 1.2 112 chr2R 20206977 intergenic not near genes chr2R 20207033 intergenic not near genes chr2R 20207089 intergenic not near genes chr2R_18_20205001 chr2R_20205001 RAL-850 1316 chr2R 20223912 20223983 chr2R 20224047 20224118 22 134 11.0 10.5 10.8 1.9 206 chr2R 20223912 intergenic not near genes chr2R 20224015 intergenic not near genes chr2R 20224118 intergenic not near genes chr2R_22_20220001 chr2R_20220001 RAL-850 1317 chr2R 20265468 20265488 chr2R 20276726 20276746 6 11262 74.5 73.0 73.8 0.1 11278 chr2R 20265468 exon CG8908 + chr2R 20271107 intergenic CG8908 + chr2R 20276746 exon CG9143 - chr2R_6_20270001 chr2R_20270001 RAL-850 1318 chr2R 20265463 20265542 chr2R 20276747 20276800 33 11268 78.5 73.0 75.8 0.4 11337 chr2R 20265463 exon CG8908 + chr2R 20271132 intergenic CG8908 + chr2R 20276800 exon CG9143 - chr2R_33_20270001 chr2R_20270001 RAL-850 1319 chr2R 20346619 20346633 chr2R 20346774 20346786 5 155 22.0 7.5 14.8 0.3 167 chr2R 20346619 intergenic CG16741 + chr2R 20346702 intergenic CG16741 + chr2R 20346786 intergenic CG16741 + chr2R_5_20345001 chr2R_20345001 RAL-850 1320 chr2R 20346634 20346635 chr2R 20346769 20346791 5 151 21.5 7.5 14.5 0.3 157 chr2R 20346634 intergenic CG16741 + chr2R 20346712 intergenic CG16741 + chr2R 20346791 intergenic CG16741 + chr2R_5_20345001 chr2R_20345001 RAL-850 1321 chr2R 20346636 20346688 chr2R 20346768 20346844 23 151 11.0 6.5 8.8 2.3 208 chr2R 20346636 intergenic CG16741 + chr2R 20346740 intergenic CG16741 + chr2R 20346844 intergenic CG16741 + chr2R_23_20345001 chr2R_20345001 RAL-850 1322 chr2R 20368472 20368496 chr2R 20377709 20377733 roo 9 9235 8.5 10.5 9.5 0.9 9261 chr2R 20368472 intergenic not near genes chr2R 20373102 intergenic not near genes chr2R 20377733 intergenic not near genes chr2R_9_20370001 chr2R_20370001 RAL-850 1323 chr2R 20379113 20379118 chr2R 20379246 20379251 5 133 18.5 1.5 10.0 0.5 138 chr2R 20379113 intergenic not near genes chr2R 20379182 intergenic not near genes chr2R 20379251 intergenic not near genes chr2R_5_20375001 chr2R_20375001 RAL-850 1324 chr2R 20383171 20383237 chr2R 20383298 20383370 25 129 7.0 7.5 7.2 3.0 199 chr2R 20383171 intergenic not near genes chr2R 20383270 intergenic not near genes chr2R 20383370 intergenic not near genes chr2R_25_20380001 chr2R_20380001 RAL-850 1325 chr2R 20389584 20389643 chr2R 20389711 20389760 13 125 7.0 10.0 8.5 1.4 176 chr2R 20389584 intergenic not near genes chr2R 20389672 intergenic not near genes chr2R 20389760 intergenic not near genes chr2R_13_20385001 chr2R_20385001 RAL-850 1326 chr2R 20395121 20395193 chr2R 20395249 20395321 27 128 9.0 5.5 7.2 3.3 200 chr2R 20395121 intergenic not near genes chr2R 20395221 intergenic not near genes chr2R 20395321 intergenic not near genes chr2R_27_20395001 chr2R_20395001 RAL-850 1327 chr2R 20405029 20405095 chr2R 20405165 20405231 23 135 9.0 7.5 8.2 2.5 202 chr2R 20405029 intergenic not near genes chr2R 20405130 intergenic not near genes chr2R 20405231 intergenic not near genes chr2R_23_20405001 chr2R_20405001 RAL-850 1328 chr2R 20413277 20413288 chr2R 20413411 20413422 8 134 17.5 10.5 14.0 0.5 145 chr2R 20413277 intergenic not near genes chr2R 20413350 intergenic not near genes chr2R 20413422 intergenic not near genes chr2R_8_20410001 chr2R_20410001 RAL-850 1329 chr2R 20413291 20413327 chr2R 20413409 20413420 15 118 12.5 10.0 11.2 1.2 129 chr2R 20413291 intergenic not near genes chr2R 20413356 intergenic not near genes chr2R 20413420 intergenic not near genes chr2R_15_20410001 chr2R_20410001 RAL-850 1330 chr2R 20414435 20414502 chr2R 20414568 20414635 29 131 9.0 10.0 9.5 2.8 200 chr2R 20414435 intergenic not near genes chr2R 20414535 intergenic not near genes chr2R 20414635 intergenic not near genes chr2R_29_20410001 chr2R_20410001 RAL-850 1331 chr2R 20432438 20432504 chr2R 20432584 20432649 18 133 15.5 10.5 13.0 1.3 211 chr2R 20432438 intron CG12484 + chr2R 20432544 intron CG12484 + chr2R 20432649 intron CG12484 + chr2R_18_20430001 chr2R_20430001 RAL-850 1332 chr2R 20434042 20434103 chr2R 20434179 20434198 5 128 0.0 8.0 4.0 1.0 156 chr2R 20434042 intron CG12484 + chr2R 20434120 intron CG12484 + chr2R 20434198 intron CG12484 + chr2R_5_20430001 chr2R_20430001 RAL-850 1333 chr2R 20479845 20479895 chr2R 20479964 20480013 10 123 7.5 5.5 6.5 1.3 168 chr2R 20479845 intergenic not near genes chr2R 20479929 intergenic not near genes chr2R 20480013 intergenic not near genes chr2R_10_20475001 chr2R_20475001 RAL-850 1334 chr2R 20506178 20506193 chr2R 20506329 20506344 6 152 13.5 9.0 11.2 0.5 166 chr2R 20506178 3` UTR CR44644 - chr2R 20506261 3` UTR,5` UTR CR44644 -,CR44645 + chr2R 20506344 3` UTR,5` UTR CR44644 -,CR44645 + chr2R_6_20505001 chr2R_20505001 RAL-850 1335 chr2R 20506197 20506241 chr2R 20506315 20506372 12 134 5.0 8.0 6.5 1.6 175 chr2R 20506197 3` UTR,5` UTR CR44644 -,CR44645 + chr2R 20506284 3` UTR,5` UTR CR44644 -,CR44645 + chr2R 20506372 3` UTR,5` UTR CR44644 -,CR44645 + chr2R_12_20505001 chr2R_20505001 RAL-850 1336 chr2R 20506908 20506932 chr2R 20507040 20507063 5 131 0.0 1.5 0.8 2.8 155 chr2R 20506908 intergenic CR44645 + chr2R 20506986 intergenic CR44645 + chr2R 20507063 intergenic CR44645 + chr2R_5_20505001 chr2R_20505001 RAL-850 1337 chr2R 20535522 20535590 chr2R 20535650 20535685 17 119 9.5 7.0 8.2 1.8 163 chr2R 20535522 3` UTR CG18067 + chr2R 20535604 3` UTR CG18067 + chr2R 20535685 3` UTR CG18067 + chr2R_17_20535001 chr2R_20535001 RAL-850 1338 chr2R 20555292 20555338 chr2R 20555434 20555474 23 142 9.0 7.0 8.0 2.6 182 chr2R 20555292 intergenic not near genes chr2R 20555383 intergenic not near genes chr2R 20555474 intergenic not near genes chr2R_23_20555001 chr2R_20555001 RAL-850 1339 chr2R 20572521 20572585 chr2R 20572661 20572720 14 140 8.5 7.5 8.0 1.6 199 chr2R 20572521 intron qsm - chr2R 20572620 intron qsm - chr2R 20572720 intron qsm - chr2R_14_20570001 chr2R_20570001 RAL-850 1340 chr2R 20590617 20590669 chr2R 20590746 20590798 28 128 4.5 10.0 7.2 3.4 181 chr2R 20590617 intron bl + chr2R 20590708 intron bl + chr2R 20590798 intron bl + chr2R_28_20590001 chr2R_20590001 RAL-850 1341 chr2R 20601669 20601749 chr2R 20601804 20601884 12 134 6.0 7.5 6.8 1.5 215 chr2R 20601669 intron bl + chr2R 20601776 intron bl + chr2R 20601884 intron bl + chr2R_12_20600001 chr2R_20600001 RAL-850 1342 chr2R 20667325 20667338 chr2R 20667482 20667500 9 161 24.0 17.0 20.5 0.4 175 chr2R 20667325 intergenic Fem-1 -,exu - chr2R 20667412 intergenic exu -,Fem-1 - chr2R 20667500 3` UTR exu - chr2R_9_20665001 chr2R_20665001 RAL-850 1343 chr2R 20739406 20739459 chr2R 20744224 20744247 F-element 15 4812 13.5 9.0 11.2 1.2 4841 chr2R 20739406 intron dpr + chr2R 20741826 intron dpr + chr2R 20744247 intron dpr + chr2R_15_20740001 chr2R_20740001 RAL-850 1344 chr2R 20757422 20757430 chr2R 20757548 20757557 6 126 17.5 16.5 17.0 0.3 135 chr2R 20757422 intergenic not near genes chr2R 20757490 intergenic not near genes chr2R 20757557 intergenic not near genes chr2R_6_20755001 chr2R_20755001 RAL-850 1345 chr2R 20757431 20757458 chr2R 20757547 20757585 16 123 8.5 15.5 12.0 1.2 154 chr2R 20757431 intergenic not near genes chr2R 20757508 intergenic not near genes chr2R 20757585 intergenic not near genes chr2R_16_20755001 chr2R_20755001 RAL-850 1346 chr2R 20761086 20761118 chr2R 20761241 20761273 6 155 3.0 0.0 1.5 2.4 187 chr2R 20761086 intergenic not near genes chr2R 20761180 intergenic not near genes chr2R 20761273 intergenic not near genes chr2R_6_20760001 chr2R_20760001 RAL-850 1347 chr2R 20783262 20783322 chr2R 20788084 20788144 F-element 22 4819 10.5 9.0 9.8 2.0 4882 chr2R 20783262 intergenic not near genes chr2R 20785703 intergenic not near genes chr2R 20788144 intergenic CG43666 - chr2R_22_20785001 chr2R_20785001 RAL-850 1348 chr2R 20942344 20942359 chr2R 20942477 20942492 7 133 0.0 7.5 3.8 1.5 148 chr2R 20942344 intergenic not near genes chr2R 20942418 intergenic not near genes chr2R 20942492 intergenic not near genes chr2R_7_20940001 chr2R_20940001 RAL-850 1349 chr2R 20962860 20962922 chr2R 20963008 20963070 34 148 10.5 12.5 11.5 2.7 210 chr2R 20962860 intergenic not near genes chr2R 20962965 intergenic not near genes chr2R 20963070 intergenic not near genes chr2R_34_20960001 chr2R_20960001 RAL-850 1350 chr2R 20966984 20967057 chr2R 20967111 20967184 15 127 6.5 0.0 3.2 3.6 200 chr2R 20966984 intergenic not near genes chr2R 20967084 intergenic not near genes chr2R 20967184 intergenic not near genes chr2R_15_20965001 chr2R_20965001 RAL-850 1351 chr2R 21079932 21079987 chr2R 21080065 21080120 28 132 10.5 7.5 9.0 2.8 188 chr2R 21079932 intron Treh + chr2R 21080026 intron Treh + chr2R 21080120 intron Treh + chr2R_28_21080001 chr2R_21080001 RAL-850 1352 chr2R 21091402 21091465 chr2R 21091535 21091598 27 133 7.5 6.0 6.8 3.5 196 chr2R 21091402 intergenic Rbpn-5 - chr2R 21091500 intergenic Rbpn-5 - chr2R 21091598 intergenic not near genes chr2R_27_21090001 chr2R_21090001 RAL-850 1353 chr2R 21101622 21101668 chr2R 21101761 21101807 12 135 9.0 19.5 14.2 0.8 185 chr2R 21101622 intergenic CG34396 +,ktub + chr2R 21101714 intergenic ktub +,CG34396 + chr2R 21101807 intergenic ktub +,CG34396 + chr2R_12_21100001 chr2R_21100001 RAL-850 1354 chr2R 21113431 21113486 chr2R 21113570 21113625 23 138 8.5 8.0 8.2 2.5 194 chr2R 21113431 intron ktub + chr2R 21113528 intron ktub + chr2R 21113625 intron ktub + chr2R_23_21110001 chr2R_21110001 RAL-850 1355 chr2R 21117418 21117497 chr2R 21117824 21117904 19 408 6.0 5.0 5.5 2.9 486 chr2R 21117418 intron ktub + chr2R 21117661 intron ktub + chr2R 21117904 intron ktub + chr2R_19_21115001 chr2R_21115001 RAL-850 1356 chr2R 21151101 21151146 chr2R 21153763 21153829 opus 15 2676 1.0 11.0 6.0 2.1 2728 chr2R 21151101 intron CG30389 - chr2R 21152465 intron CG30389 - chr2R 21153829 intron CG30389 - chr2R_15_21150001 chr2R_21150001 RAL-850 1357 chr2R 21188171 21188248 chr2R 21188302 21188374 41 131 9.0 7.5 8.2 4.5 203 chr2R 21188171 exon tud + chr2R 21188272 intron tud + chr2R 21188374 exon tud + chr2R_41_21185001 chr2R_21185001 RAL-850 1358 chr2R 21217272 21217284 chr2R 21217409 21217421 5 137 20.0 0.0 10.0 0.5 149 chr2R 21217272 exon CG15661 - chr2R 21217346 5` UTR CG15661 - chr2R 21217421 5` UTR CG15661 - chr2R_5_21215001 chr2R_21215001 RAL-850 1359 chr2R 21258457 21258499 chr2R 21258561 21258627 7 119 0.5 9.5 5.0 1.2 170 chr2R 21258457 intron Rgk3 + chr2R 21258542 intron Rgk3 + chr2R 21258627 intron Rgk3 + chr2R_7_21255001 chr2R_21255001 RAL-850 1360 chr2R 21408324 21408406 chr2R 21408466 21408547 23 142 7.0 0.0 3.5 5.1 223 chr2R 21408324 intron Sdc - chr2R 21408436 intron Sdc - chr2R 21408547 intron Sdc - chr2R_23_21405001 chr2R_21405001 RAL-850 1361 chr2R 21417226 21417231 chr2R 21417378 21417383 4 152 16.0 0.0 8.0 0.4 157 chr2R 21417226 intron Sdc - chr2R 21417304 intron Sdc - chr2R 21417383 intron Sdc - chr2R_4_21415001 chr2R_21415001 RAL-850 1362 chr2R 21447067 21447110 chr2R 21447220 21447265 6 154 6.5 6.5 6.5 0.8 198 chr2R 21447067 intron Sdc - chr2R 21447166 intron Sdc - chr2R 21447265 intron Sdc - chr2R_6_21445001 chr2R_21445001 RAL-850 1363 chr2R 21540643 21540684 chr2R 21540911 21540952 15 268 8.5 3.0 5.8 2.2 309 chr2R 21540643 intron Egfr + chr2R 21540798 intron Egfr + chr2R 21540952 intron Egfr + chr2R_15_21540001 chr2R_21540001 RAL-850 1364 chr2R 21578719 21578756 chr2R 21578854 21578891 19 135 9.0 13.5 11.2 1.6 172 chr2R 21578719 intergenic not near genes chr2R 21578805 intergenic not near genes chr2R 21578891 intergenic not near genes chr2R_19_21575001 chr2R_21575001 RAL-850 1365 chr2R 21592809 21592820 chr2R 21592931 21592953 4 128 23.5 21.5 22.5 0.2 144 chr2R 21592809 intergenic not near genes chr2R 21592881 intergenic not near genes chr2R 21592953 intergenic not near genes chr2R_4_21590001 chr2R_21590001 RAL-850 1366 chr2R 21592834 21592850 chr2R 21592929 21592930 5 91 19.0 20.5 19.8 0.2 96 chr2R 21592834 intergenic not near genes chr2R 21592882 intergenic not near genes chr2R 21592930 intergenic not near genes chr2R_5_21590001 chr2R_21590001 RAL-850 1367 chr2R 21700123 21700145 chr2R 21700254 21700264 7 133 22.5 11.5 17.0 0.4 141 chr2R 21700123 intron HmgZ - chr2R 21700194 intron HmgZ - chr2R 21700264 intron HmgZ - chr2R_7_21700001 chr2R_21700001 RAL-850 1368 chr2R 21700150 21700178 chr2R 21700248 21700314 16 130 12.5 10.5 11.5 1.3 164 chr2R 21700150 intron HmgZ - chr2R 21700232 intron HmgZ - chr2R 21700314 intron HmgZ - chr2R_16_21700001 chr2R_21700001 RAL-850 1369 chr2R 21726658 21726716 chr2R 21726806 21726871 9 152 7.0 0.0 3.5 2.0 213 chr2R 21726658 intergenic not near genes chr2R 21726764 intergenic not near genes chr2R 21726871 intergenic not near genes chr2R_9_21725001 chr2R_21725001 RAL-850 1370 chr2R 21738240 21738280 chr2R 21747450 21747478 roo 10 9199 9.0 10.5 9.8 0.9 9238 chr2R 21738240 intergenic not near genes chr2R 21742859 intergenic not near genes chr2R 21747478 intergenic not near genes chr2R_10_21740001 chr2R_21740001 RAL-850 1371 chr2R 21738284 21738303 chr2R 21747440 21747513 roo 9 9181 4.0 8.0 6.0 1.3 9229 chr2R 21738284 intergenic not near genes chr2R 21742898 intergenic not near genes chr2R 21747513 intergenic not near genes chr2R_9_21740001 chr2R_21740001 RAL-850 1372 chr2R 21753040 21753117 chr2R 21753575 21753606 roo 42 533 9.0 7.0 8.0 4.7 566 chr2R 21753040 intergenic not near genes chr2R 21753323 intergenic not near genes chr2R 21753606 intergenic not near genes chr2R_42_21750001 chr2R_21750001 RAL-850 1373 chr2R 21777257 21777445 chr2R 21777352 21777578 35 131 3.5 4.0 3.8 7.3 321 chr2R 21777257 intergenic not near genes chr2R 21777418 intergenic not near genes chr2R 21777578 intergenic not near genes chr2R_35_21775001 chr2R_21775001 RAL-850 1374 chr2R 21779292 21779340 chr2R 21779457 21779504 12 164 8.5 4.5 6.5 1.6 212 chr2R 21779292 intergenic not near genes chr2R 21779398 intergenic not near genes chr2R 21779504 intergenic not near genes chr2R_12_21775001 chr2R_21775001 RAL-850 1375 chr2R 21809484 21809544 chr2R 21817774 21817812 roo 30 8289 8.0 13.0 10.5 2.6 8328 chr2R 21809484 intergenic not near genes chr2R 21813648 intergenic not near genes chr2R 21817812 intergenic not near genes chr2R_30_21810001 chr2R_21810001 RAL-850 1376 chr2R 21831123 21831125 chr2R 21831250 21831252 4 127 0.0 14.0 7.0 0.5 129 chr2R 21831123 intron CG13492 - chr2R 21831188 intron CG13492 - chr2R 21831252 intron CG13492 - chr2R_4_21830001 chr2R_21830001 RAL-850 1377 chr2R 21857299 21857371 chr2R 21857440 21857507 35 138 9.5 9.5 9.5 3.3 208 chr2R 21857299 intergenic not near genes chr2R 21857403 intergenic not near genes chr2R 21857507 intergenic not near genes chr2R_35_21855001 chr2R_21855001 RAL-850 1378 chr2R 21888248 21888289 chr2R 21888409 21888450 10 160 1.5 9.0 5.2 1.6 202 chr2R 21888248 intron Fili + chr2R 21888349 intron Fili + chr2R 21888450 intron Fili + chr2R_10_21885001 chr2R_21885001 RAL-850 1379 chr2R 21894835 21894916 chr2R 21894963 21895042 24 120 2.0 1.0 1.5 9.6 207 chr2R 21894835 intron Fili + chr2R 21894938 intron Fili + chr2R 21895042 intron Fili + chr2R_24_21890001 chr2R_21890001 RAL-850 1380 chr2R 21906231 21906303 chr2R 21906382 21906453 24 151 6.0 4.5 5.2 3.9 222 chr2R 21906231 intron Fili + chr2R 21906342 intron Fili + chr2R 21906453 intron Fili + chr2R_24_21905001 chr2R_21905001 RAL-850 1381 chr2R 21914305 21914329 chr2R 21914442 21914466 12 136 3.0 4.0 3.5 2.7 161 chr2R 21914305 intron Fili + chr2R 21914386 intron Fili + chr2R 21914466 intron Fili + chr2R_12_21910001 chr2R_21910001 RAL-850 1382 chr2R 21966501 21966520 chr2R 21966639 21966658 7 137 7.0 0.0 3.5 1.6 157 chr2R 21966501 intron ppk9 + chr2R 21966580 intron ppk9 + chr2R 21966658 intron ppk9 + chr2R_7_21965001 chr2R_21965001 RAL-850 1383 chr2R 22008990 22009072 chr2R 22009129 22009203 14 137 0.5 5.0 2.8 3.7 213 chr2R 22008990 intron CG34370 - chr2R 22009096 intron CG34370 - chr2R 22009203 intron CG34370 - chr2R_14_22005001 chr2R_22005001 RAL-850 1384 chr2R 22012948 22013010 chr2R 22013093 22013155 29 145 5.0 8.0 6.5 3.9 207 chr2R 22012948 intron CG34370 - chr2R 22013052 intron CG34370 - chr2R 22013155 intron CG34370 - chr2R_29_22010001 chr2R_22010001 RAL-850 1385 chr2R 22029430 22029504 chr2R 22029617 22029692 23 187 4.5 6.0 5.2 3.7 262 chr2R 22029430 intron CG34370 - chr2R 22029561 intron CG34370 - chr2R 22029692 intron CG34370 - chr2R_23_22025001 chr2R_22025001 RAL-850 1386 chr2R 22040112 22040176 chr2R 22040236 22040306 17 120 6.0 5.5 5.8 2.5 194 chr2R 22040112 intergenic not near genes chr2R 22040209 intergenic not near genes chr2R 22040306 intergenic not near genes chr2R_17_22040001 chr2R_22040001 RAL-850 1387 chr2R 22072635 22072712 chr2R 22072770 22072847 18 134 4.5 12.5 8.5 1.9 212 chr2R 22072635 intron CG11474 - chr2R 22072741 intron CG11474 - chr2R 22072847 exon CG11474 - chr2R_18_22070001 chr2R_22070001 RAL-850 1388 chr2R 22099826 22099878 chr2R 22099957 22100009 21 131 7.5 7.5 7.5 2.5 183 chr2R 22099826 intergenic CG11073 - chr2R 22099918 intergenic CG11073 - chr2R 22100009 intergenic CG11073 - chr2R_21_22095001 chr2R_22095001 RAL-850 1389 chr2R 22132243 22132286 chr2R 22132373 22132416 24 130 12.0 8.0 10.0 2.2 173 chr2R 22132243 intergenic not near genes chr2R 22132330 intergenic not near genes chr2R 22132416 intergenic not near genes chr2R_24_22130001 chr2R_22130001 RAL-850 1390 chr2R 22185629 22185707 chr2R 22185778 22185856 15 149 8.0 0.0 4.0 3.0 227 chr2R 22185629 exon MED16 + chr2R 22185742 3` UTR MED16 + chr2R 22185856 3` UTR MED16 + chr2R_15_22185001 chr2R_22185001 RAL-850 1391 chr2R 22189394 22189469 chr2R 22189572 22189646 18 176 7.5 4.0 5.8 2.6 252 chr2R 22189394 3` UTR Vps35 + chr2R 22189520 3` UTR Vps35 + chr2R 22189646 3` UTR Vps35 + chr2R_18_22185001 chr2R_22185001 RAL-850 1392 chr2R 22248819 22248870 chr2R 22248921 22248966 32 121 7.5 8.5 8.0 3.6 147 chr2R 22248819 intron dve + chr2R 22248892 intron dve + chr2R 22248966 intron dve + chr2R_32_22245001 chr2R_22245001 RAL-850 1393 chr2R 22290034 22290054 chr2R 22290168 22290188 8 134 13.5 3.5 8.5 0.8 154 chr2R 22290034 intergenic not near genes chr2R 22290111 intergenic not near genes chr2R 22290188 intergenic not near genes chr2R_8_22290001 chr2R_22290001 RAL-850 1394 chr2R 22349651 22349720 chr2R 22351485 22351519 jockey 22 1830 13.5 8.5 11.0 1.8 1868 chr2R 22349651 intron Liprin-gamma - chr2R 22350585 intron Liprin-gamma - chr2R 22351519 intron Liprin-gamma - chr2R_22_22350001 chr2R_22350001 RAL-850 1395 chr2R 22360339 22360346 chr2R 22360822 22360828 jockey 4 483 19.5 6.5 13.0 0.3 489 chr2R 22360339 intron Liprin-gamma - chr2R 22360584 intron Liprin-gamma - chr2R 22360828 intron Liprin-gamma - chr2R_4_22360001 chr2R_22360001 RAL-850 1396 chr2R 22370725 22370776 chr2R 22370853 22370904 10 128 7.0 3.5 5.2 1.6 179 chr2R 22370725 intron Liprin-gamma - chr2R 22370814 intron Liprin-gamma - chr2R 22370904 intron Liprin-gamma - chr2R_10_22370001 chr2R_22370001 RAL-850 1397 chr2R 22374589 22374638 chr2R 22374726 22374775 20 136 5.0 5.0 5.0 3.3 186 chr2R 22374589 3` UTR CR44759 - chr2R 22374682 3` UTR CR44759 - chr2R 22374775 3` UTR CR44759 - chr2R_20_22370001 chr2R_22370001 RAL-850 1398 chr2R 22441068 22441110 chr2R 22441199 22441228 10 123 13.5 9.0 11.2 0.8 160 chr2R 22441068 intergenic not near genes chr2R 22441148 intergenic not near genes chr2R 22441228 intergenic not near genes chr2R_10_22440001 chr2R_22440001 RAL-850 1399 chr2R 22441111 22441132 chr2R 22441195 22441266 9 117 9.0 9.0 9.0 0.9 155 chr2R 22441111 intergenic not near genes chr2R 22441188 intergenic not near genes chr2R 22441266 intergenic not near genes chr2R_9_22440001 chr2R_22440001 RAL-850 1400 chr2R 22503817 22503890 chr2R 22503962 22504035 16 145 4.0 3.0 3.5 3.6 218 chr2R 22503817 intron px - chr2R 22503926 intron px - chr2R 22504035 intron px - chr2R_16_22500001 chr2R_22500001 RAL-850 1401 chr2R 22525706 22525779 chr2R 22529311 22529339 jockey 31 3602 6.5 8.0 7.2 3.8 3633 chr2R 22525706 intron px - chr2R 22527522 intron px - chr2R 22529339 intron px - chr2R_31_22525001 chr2R_22525001 RAL-850 1402 chr2R 22575647 22575652 chr2R 22575753 22575781 5 124 12.0 8.0 10.0 0.5 134 chr2R 22575647 intron dnr1 - chr2R 22575714 intron dnr1 - chr2R 22575781 intron dnr1 - chr2R_5_22575001 chr2R_22575001 RAL-850 1403 chr2R 22575661 22575673 chr2R 22575749 22575775 7 106 4.5 8.0 6.2 1.0 114 chr2R 22575661 intron dnr1 - chr2R 22575718 intron dnr1 - chr2R 22575775 intron dnr1 - chr2R_7_22575001 chr2R_22575001 RAL-850 1404 chr2R 22575674 22575675 chr2R 22575748 22575789 6 100 4.0 7.5 5.8 0.9 115 chr2R 22575674 intron dnr1 - chr2R 22575732 intron dnr1 - chr2R 22575789 intron dnr1 - chr2R_6_22575001 chr2R_22575001 RAL-850 1405 chr2R 22575676 22575676 chr2R 22575746 22575774 4 80 3.5 7.5 5.5 0.6 98 chr2R 22575676 intron dnr1 - chr2R 22575725 intron dnr1 - chr2R 22575774 intron dnr1 - chr2R_4_22575001 chr2R_22575001 RAL-850 1406 chr2R 22575677 22575687 chr2R 22575743 22575816 12 112 3.5 6.5 5.0 2.0 139 chr2R 22575677 intron dnr1 - chr2R 22575746 intron dnr1 - chr2R 22575816 intron dnr1 - chr2R_12_22575001 chr2R_22575001 RAL-850 1407 chr2R 22577045 22577073 chr2R 22577174 22577192 10 126 13.5 0.5 7.0 1.2 147 chr2R 22577045 intron dnr1 - chr2R 22577118 intron dnr1 - chr2R 22577192 intron dnr1 - chr2R_10_22575001 chr2R_22575001 RAL-850 1408 chr2R 22577078 22577123 chr2R 22577172 22577253 5 112 6.0 0.5 3.2 1.2 175 chr2R 22577078 intron dnr1 - chr2R 22577166 intron dnr1 - chr2R 22577253 intron dnr1 - chr2R_5_22575001 chr2R_22575001 RAL-850 1409 chr2R 22580387 22580444 chr2R 22586581 22586638 diver 21 6194 10.0 9.0 9.5 2.0 6251 chr2R 22580387 intron dnr1 - chr2R 22583512 intron dnr1 - chr2R 22586638 intron dnr1 - chr2R_21_22580001 chr2R_22580001 RAL-850 1410 chr2R 22588108 22588154 chr2R 22588253 22588297 15 137 9.5 22.5 16.0 0.9 189 chr2R 22588108 intron dnr1 - chr2R 22588202 intron dnr1 - chr2R 22588297 intron dnr1 - chr2R_15_22585001 chr2R_22585001 RAL-850 1411 chr2R 22620782 22620859 chr2R 22620932 22621009 29 147 6.0 8.0 7.0 3.6 227 chr2R 22620782 5` UTR CG33143 + chr2R 22620896 5` UTR CG33143 + chr2R 22621009 5` UTR CG33143 + chr2R_29_22620001 chr2R_22620001 RAL-850 1412 chr2R 22623411 22623435 chr2R 22623601 22623625 13 190 1.0 14.5 7.8 1.5 214 chr2R 22623411 intron CG33143 + chr2R 22623518 intron CG33143 + chr2R 22623625 intron CG33143 + chr2R_13_22620001 chr2R_22620001 RAL-850 1413 chr2R 22623436 22623477 chr2R 22623596 22623666 20 185 1.0 13.0 7.0 2.5 230 chr2R 22623436 intron CG33143 + chr2R 22623551 intron CG33143 + chr2R 22623666 intron CG33143 + chr2R_20_22620001 chr2R_22620001 RAL-850 1414 chr2R 22646418 22646433 chr2R 22646560 22646575 8 142 16.5 0.0 8.2 0.9 157 chr2R 22646418 intergenic CG2852 -,CG30195 - chr2R 22646496 intergenic CG30195 -,CG2852 - chr2R 22646575 intergenic CG30195 -,CG2852 - chr2R_8_22645001 chr2R_22645001 RAL-850 1415 chr2R 22666728 22666776 chr2R 22666854 22666902 26 126 4.0 5.5 4.8 4.5 174 chr2R 22666728 5` UTR CR42868 + chr2R 22666815 intergenic CR42868 +,CR45269 -,CG30273 + chr2R 22666902 intergenic CR42868 +,CG30273 +,CR45269 - chr2R_26_22665001 chr2R_22665001 RAL-850 1416 chr2R 22729419 22729466 chr2R 22729667 22729724 INE-1 21 256 11.0 10.0 10.5 1.8 305 chr2R 22729419 intron jbug - chr2R 22729572 intron jbug - chr2R 22729724 intron jbug - chr2R_21_22725001 chr2R_22725001 RAL-850 1417 chr2R 22756509 22756522 chr2R 22756636 22756649 14 127 18.5 12.5 15.5 0.8 140 chr2R 22756509 intron,5` UTR CG42260 -,CR30267 + chr2R 22756579 intron,intron CG42260 -,CR30267 + chr2R 22756649 intron,intron CG42260 -,CR30267 + chr2R_14_22755001 chr2R_22755001 RAL-850 1418 chr2R 22756524 22756574 chr2R 22756635 22756701 17 124 11.0 13.0 12.0 1.3 177 chr2R 22756524 intron,intron CG42260 -,CR30267 + chr2R 22756612 intron,intron CG42260 -,CR30267 + chr2R 22756701 intron,intron CG42260 -,CR30267 + chr2R_17_22755001 chr2R_22755001 RAL-850 1419 chr2R 22763122 22763181 chr2R 22763695 22763754 26 573 9.0 11.0 10.0 2.4 632 chr2R 22763122 intron CG42260 - chr2R 22763438 intron CG42260 - chr2R 22763754 intron,5` UTR CG42260 -,CG13527 + chr2R_26_22760001 chr2R_22760001 RAL-850 1420 chr2R 22773374 22773443 chr2R 22773531 22773605 28 155 8.0 8.0 8.0 3.1 231 chr2R 22773374 intron CG42260 - chr2R 22773490 intron CG42260 - chr2R 22773605 intron CG42260 - chr2R_28_22770001 chr2R_22770001 RAL-850 1421 chr2R 22774917 22774987 chr2R 22775386 22775456 jockey 28 468 9.5 6.0 7.8 3.2 539 chr2R 22774917 intron CG42260 - chr2R 22775186 intron CG42260 - chr2R 22775456 intron CG42260 - chr2R_28_22775001 chr2R_22775001 RAL-850 1422 chr2R 22842989 22843043 chr2R 22845001 22845055 flea 8 2012 10.0 9.0 9.5 0.8 2066 chr2R 22842989 intergenic CG9826 + chr2R 22844022 intergenic not near genes chr2R 22845055 intergenic not near genes chr2R_8_22840001 chr2R_22840001 RAL-850 1423 chr2R 22864943 22864957 chr2R 22865078 22865092 5 134 4.5 6.0 5.2 0.8 149 chr2R 22864943 intergenic not near genes chr2R 22865018 intergenic not near genes chr2R 22865092 intergenic not near genes chr2R_5_22865001 chr2R_22865001 RAL-850 1424 chr2R 22908436 22908445 chr2R 22908562 22908571 4 126 13.0 7.5 10.2 0.4 135 chr2R 22908436 intron nahoda + chr2R 22908504 intron nahoda + chr2R 22908571 intron nahoda + chr2R_4_22905001 chr2R_22905001 RAL-850 1425 chr2R 22908448 22908475 chr2R 22908554 22908591 10 121 7.5 7.5 7.5 1.2 143 chr2R 22908448 intron nahoda + chr2R 22908520 intron nahoda + chr2R 22908591 intron nahoda + chr2R_10_22905001 chr2R_22905001 RAL-850 1426 chr2R 22957003 22957062 chr2R 22957132 22957191 29 128 8.0 10.5 9.2 2.8 188 chr2R 22957003 intergenic CR44780 - chr2R 22957097 intergenic CR44780 - chr2R 22957191 3` UTR CR44780 - chr2R_29_22955001 chr2R_22955001 RAL-850 1427 chr2R 22988290 22988319 chr2R 22988404 22988450 14 129 11.5 15.0 13.2 1.0 160 chr2R 22988290 intron twi + chr2R 22988370 intron twi + chr2R 22988450 intron twi + chr2R_14_22985001 chr2R_22985001 RAL-850 1428 chr2R 23052607 23052674 chr2R 23052733 23052800 32 126 10.5 6.5 8.5 3.4 193 chr2R 23052607 intergenic not near genes chr2R 23052704 intergenic not near genes chr2R 23052800 intergenic not near genes chr2R_32_23050001 chr2R_23050001 RAL-850 1429 chr2R 23061724 23061788 chr2R 23061868 23061922 26 141 2.0 8.5 5.2 4.2 198 chr2R 23061724 3` UTR l(2)06496 - chr2R 23061823 3` UTR l(2)06496 - chr2R 23061922 3` UTR l(2)06496 - chr2R_26_23060001 chr2R_23060001 RAL-850 1430 chr2R 23122861 23122940 chr2R 23122990 23123072 27 131 12.0 6.0 9.0 2.7 211 chr2R 23122861 intergenic not near genes chr2R 23122966 intergenic not near genes chr2R 23123072 intergenic not near genes chr2R_27_23120001 chr2R_23120001 RAL-850 1431 chr2R 23155652 23155877 chr2R 23155809 23156003 40 147 3.0 0.0 1.5 16.0 351 chr2R 23155652 intron CG9899 + chr2R 23155828 intron CG9899 + chr2R 23156003 intron CG9899 + chr2R_40_23155001 chr2R_23155001 RAL-850 1432 chr2R 23157233 23157253 chr2R 23157339 23157382 10 117 8.5 4.0 6.2 1.4 149 chr2R 23157233 intron CG9899 + chr2R 23157308 intron CG9899 + chr2R 23157382 intron CG9899 + chr2R_10_23155001 chr2R_23155001 RAL-850 1433 chr2R 23174991 23175067 chr2R 23175118 23175174 33 119 10.0 5.0 7.5 3.9 183 chr2R 23174991 intron CG34371 - chr2R 23175082 intron CG34371 - chr2R 23175174 intron CG34371 - chr2R_33_23175001 chr2R_23175001 RAL-850 1434 chr2R 23236766 23236852 chr2R 23236914 23236996 14 145 5.5 6.5 6.0 2.0 230 chr2R 23236766 intergenic not near genes chr2R 23236881 intergenic not near genes chr2R 23236996 intergenic not near genes chr2R_14_23235001 chr2R_23235001 RAL-850 1435 chr2R 23243158 23243232 chr2R 23243284 23243358 21 123 5.5 10.5 8.0 2.3 200 chr2R 23243158 intergenic not near genes chr2R 23243258 intergenic not near genes chr2R 23243358 intergenic not near genes chr2R_21_23240001 chr2R_23240001 RAL-850 1436 chr2R 23287775 23287847 chr2R 23287903 23287975 29 127 6.5 7.5 7.0 3.6 200 chr2R 23287775 intergenic not near genes chr2R 23287875 intergenic not near genes chr2R 23287975 intergenic not near genes chr2R_29_23285001 chr2R_23285001 RAL-850 1437 chr2R 23341250 23341307 chr2R 23343217 23343278 15 1975 5.0 6.5 5.8 2.2 2028 chr2R 23341250 intergenic not near genes chr2R 23342264 intergenic not near genes chr2R 23343278 intergenic CG3502 - chr2R_15_23340001 chr2R_23340001 RAL-850 1438 chr2R 23356236 23356308 chr2R 23356375 23356429 36 135 12.5 7.5 10.0 3.3 193 chr2R 23356236 3` UTR Rpi + chr2R 23356332 3` UTR Rpi + chr2R 23356429 3` UTR,3` UTR Rpi +,CG3500 - chr2R_36_23355001 chr2R_23355001 RAL-850 1439 chr2R 23368773 23368843 chr2R 23368939 23369009 31 165 12.5 12.5 12.5 2.3 236 chr2R 23368773 exon Ice1 + chr2R 23368891 exon Ice1 + chr2R 23369009 exon Ice1 + chr2R_31_23365001 chr2R_23365001 RAL-850 1440 chr2R 23392235 23392292 chr2R 23392391 23392431 10 145 19.5 9.0 14.2 0.7 196 chr2R 23392235 intron CG3530 - chr2R 23392333 intron CG3530 - chr2R 23392431 intron CG3530 - chr2R_10_23390001 chr2R_23390001 RAL-850 1441 chr2R 23392295 23392308 chr2R 23392380 23392440 5 104 15.0 7.5 11.2 0.4 145 chr2R 23392295 intron CG3530 - chr2R 23392368 intron CG3530 - chr2R 23392440 intron CG3530 - chr2R_5_23390001 chr2R_23390001 RAL-850 1442 chr2R 23402586 23402603 chr2R 23407683 23407700 flea 8 5097 5.5 10.0 7.8 0.9 5114 chr2R 23402586 intergenic CG3520 - chr2R 23405143 intergenic not near genes chr2R 23407700 intergenic not near genes chr2R_8_23405001 chr2R_23405001 RAL-850 1443 chr2R 23432974 23433054 chr2R 23433102 23433177 33 125 10.5 9.5 10.0 3.0 203 chr2R 23432974 intron CG9815 - chr2R 23433076 intron CG9815 - chr2R 23433177 intron CG9815 - chr2R_33_23430001 chr2R_23430001 RAL-850 1444 chr2R 23437212 23437242 chr2R 23437309 23437350 10 101 11.5 15.0 13.2 0.7 138 chr2R 23437212 intergenic not near genes chr2R 23437281 intergenic not near genes chr2R 23437350 intergenic not near genes chr2R_10_23435001 chr2R_23435001 RAL-850 1445 chr2R 23463340 23463418 chr2R 23463469 23463547 28 127 12.5 10.5 11.5 2.2 207 chr2R 23463340 intron CG43795 + chr2R 23463444 intron CG43795 + chr2R 23463547 intron CG43795 + chr2R_28_23460001 chr2R_23460001 RAL-850 1446 chr2R 23508870 23508939 chr2R 23509037 23509106 30 167 5.0 5.0 5.0 5.0 236 chr2R 23508870 intergenic not near genes chr2R 23508988 intergenic not near genes chr2R 23509106 intergenic not near genes chr2R_30_23505001 chr2R_23505001 RAL-850 1447 chr2R 23518148 23518204 chr2R 23518276 23518332 20 128 7.5 4.5 6.0 2.9 184 chr2R 23518148 intergenic not near genes chr2R 23518240 intergenic not near genes chr2R 23518332 intergenic not near genes chr2R_20_23515001 chr2R_23515001 RAL-850 1448 chr2R 23529525 23529543 chr2R 23537151 23537169 412 6 7626 17.5 8.5 13.0 0.4 7644 chr2R 23529525 exon bw - chr2R 23533347 intron bw - chr2R 23537169 exon bw - chr2R_6_23530001 chr2R_23530001 RAL-850 1449 chr2R 23529548 23529586 chr2R 23537149 23537196 412 26 7609 7.5 8.5 8.0 2.9 7648 chr2R 23529548 intron bw - chr2R 23533372 intron bw - chr2R 23537196 exon bw - chr2R_26_23530001 chr2R_23530001 RAL-850 1450 chr2R 23588047 23588074 chr2R 23588175 23588202 7 128 6.5 11.0 8.8 0.7 155 chr2R 23588047 intron apt + chr2R 23588124 intron apt + chr2R 23588202 intron apt + chr2R_7_23585001 chr2R_23585001 RAL-850 1451 chr2R 23653940 23654001 chr2R 23654055 23654128 29 121 12.5 8.5 10.5 2.5 188 chr2R 23653940 3` UTR retn + chr2R 23654034 3` UTR retn + chr2R 23654128 3` UTR retn + chr2R_29_23650001 chr2R_23650001 RAL-850 1452 chr2R 23674137 23674169 chr2R 23674267 23674299 14 129 19.5 11.0 15.2 0.9 162 chr2R 23674137 intron Pde8 + chr2R 23674218 intron Pde8 + chr2R 23674299 exon Pde8 + chr2R_14_23670001 chr2R_23670001 RAL-850 1453 chr2R 23674173 23674192 chr2R 23674261 23674322 14 125 14.0 9.0 11.5 1.1 149 chr2R 23674173 intron Pde8 + chr2R 23674248 intron Pde8 + chr2R 23674322 exon Pde8 + chr2R_14_23670001 chr2R_23670001 RAL-850 1454 chr2R 23739725 23739729 chr2R 23739821 23739830 4 100 16.0 8.5 12.2 0.3 105 chr2R 23739725 intron egl - chr2R 23739778 intron egl - chr2R 23739830 intron egl - chr2R_4_23735001 chr2R_23735001 RAL-850 1455 chr2R 23745600 23745676 chr2R 23745733 23745749 24 126 7.0 13.0 10.0 2.2 149 chr2R 23745600 intron egl - chr2R 23745674 intron egl - chr2R 23745749 intron egl - chr2R_24_23745001 chr2R_23745001 RAL-850 1456 chr2R 23758298 23758357 chr2R 23758424 23758473 7 113 7.5 11.0 9.2 0.7 175 chr2R 23758298 intron CG9850 - chr2R 23758386 intron CG9850 - chr2R 23758473 intron CG9850 - chr2R_7_23755001 chr2R_23755001 RAL-850 1457 chr2R 23784429 23784500 chr2R 23784557 23784627 40 127 12.5 10.0 11.2 3.3 198 chr2R 23784429 intron CG9850 - chr2R 23784528 intron CG9850 - chr2R 23784627 intron CG9850 - chr2R_40_23780001 chr2R_23780001 RAL-850 1458 chr2R 23802251 23802312 chr2R 23802392 23802465 18 139 6.5 12.5 9.5 1.7 214 chr2R 23802251 exon CG30177 + chr2R 23802358 3` UTR CG30177 + chr2R 23802465 3` UTR CG30177 + chr2R_18_23800001 chr2R_23800001 RAL-850 1459 chr2R 23819094 23819138 chr2R 23819239 23819283 16 145 15.5 3.5 9.5 1.5 189 chr2R 23819094 intergenic not near genes chr2R 23819188 intergenic not near genes chr2R 23819283 intergenic not near genes chr2R_16_23815001 chr2R_23815001 RAL-850 1460 chr2R 23823594 23823661 chr2R 23824078 23824145 31 484 5.0 9.0 7.0 3.9 551 chr2R 23823594 intron,intron CG5549 +,CG4763 - chr2R 23823870 intron,exon CG5549 +,CG4763 - chr2R 23824145 intron,intron CG5549 +,CG4763 - chr2R_31_23820001 chr2R_23820001 RAL-850 1461 chr2R 23914253 23914328 chr2R 23921927 23921984 412 29 7671 8.0 10.0 9.0 2.9 7731 chr2R 23914253 exon kcc + chr2R 23918118 intron kcc + chr2R 23921984 exon kcc + chr2R_29_23915001 chr2R_23915001 RAL-850 1462 chr2R 24031338 24031407 chr2R 24031472 24031532 38 132 9.5 8.0 8.8 3.9 194 chr2R 24031338 5` UTR CG30172 - chr2R 24031435 intergenic CG30172 -,Chi - chr2R 24031532 intergenic Chi -,CG30172 - chr2R_38_24030001 chr2R_24030001 RAL-850 1463 chr2R 24045823 24045902 chr2R 24045956 24046036 28 131 8.0 10.0 9.0 2.8 213 chr2R 24045823 intron tsr - chr2R 24045930 intron tsr - chr2R 24046036 intron tsr - chr2R_28_24045001 chr2R_24045001 RAL-850 1464 chr2R 24144048 24144093 chr2R 24144190 24144235 10 142 8.0 10.5 9.2 1.0 187 chr2R 24144048 intron Dat + chr2R 24144142 intron Dat + chr2R 24144235 intron Dat + chr2R_10_24140001 chr2R_24140001 RAL-850 1465 chr2R 24147029 24147086 chr2R 24154657 24154714 412 12 7622 6.0 11.0 8.5 1.3 7685 chr2R 24147029 intron Dat + chr2R 24150872 intron Dat + chr2R 24154714 intron Dat + chr2R_12_24150001 chr2R_24150001 RAL-850 1466 chr2R 24177191 24177254 chr2R 24184726 24184789 412 25 7534 13.0 3.0 8.0 2.8 7598 chr2R 24177191 3` UTR Nop60B + chr2R 24180990 intron Nop60B + chr2R 24184789 3` UTR Nop60B + chr2R_25_24180001 chr2R_24180001 RAL-850 1467 chr2R 24204518 24204588 chr2R 24204650 24204719 26 131 9.5 7.0 8.2 2.8 201 chr2R 24204518 intron CG11406 - chr2R 24204618 intron CG11406 - chr2R 24204719 intron CG11406 - chr2R_26_24200001 chr2R_24200001 RAL-850 1468 chr2R 24287091 24287165 chr2R 24287218 24287273 30 124 7.0 2.0 4.5 5.5 182 chr2R 24287091 intron nvy + chr2R 24287182 intron nvy + chr2R 24287273 intron nvy + chr2R_30_24285001 chr2R_24285001 RAL-850 1469 chr2R 24320665 24320735 chr2R 24320926 24320981 25 257 9.5 12.5 11.0 2.1 316 chr2R 24320665 intergenic not near genes chr2R 24320823 intergenic not near genes chr2R 24320981 intergenic not near genes chr2R_25_24320001 chr2R_24320001 RAL-850 1470 chr2R 24351363 24351440 chr2R 24351494 24351571 35 130 5.0 8.5 6.8 4.5 208 chr2R 24351363 intron,5` UTR bs +,CG44812 - chr2R 24351467 intron bs + chr2R 24351571 intron,3` UTR bs +,CR44811 - chr2R_35_24350001 chr2R_24350001 RAL-850 1471 chr2R 24353377 24353427 chr2R 24361788 24361829 roo 10 8411 11.5 8.5 10.0 0.9 8452 chr2R 24353377 intron,intron bs +,CR44811 - chr2R 24357603 intron,intron bs +,CR44811 - chr2R 24361829 intron,intron bs +,CR44811 - chr2R_10_24355001 chr2R_24355001 RAL-850 1472 chr2R 24383784 24383856 chr2R 24383914 24383959 26 129 8.0 8.0 8.0 2.9 175 chr2R 24383784 intron mAChR-A - chr2R 24383872 intron mAChR-A - chr2R 24383959 exon mAChR-A - chr2R_26_24380001 chr2R_24380001 RAL-850 1473 chr2R 24493036 24493088 chr2R 24493175 24493227 22 139 9.0 8.0 8.5 2.3 191 chr2R 24493036 intergenic CG13589 -,CG13590 - chr2R 24493132 intergenic CG13590 -,CG13589 - chr2R 24493227 intergenic CG13590 -,CG13589 - chr2R_22_24490001 chr2R_24490001 RAL-850 1474 chr2R 24590074 24590140 chr2R 24590216 24590282 34 136 6.0 8.5 7.2 4.1 208 chr2R 24590074 intron pio + chr2R 24590178 intron pio + chr2R 24590282 intron pio + chr2R_34_24590001 chr2R_24590001 RAL-850 1475 chr2R 24591473 24591547 chr2R 24591599 24591677 31 127 7.5 9.5 8.5 3.3 204 chr2R 24591473 intron pio + chr2R 24591575 intron pio + chr2R 24591677 intron pio + chr2R_31_24590001 chr2R_24590001 RAL-850 1476 chr2R 24647525 24647534 chr2R 24655146 24655147 412 5 7619 17.0 8.5 12.8 0.4 7622 chr2R 24647525 intergenic not near genes chr2R 24651336 intergenic not near genes chr2R 24655147 intergenic not near genes chr2R_5_24650001 chr2R_24650001 RAL-850 1477 chr2R 24647535 24647605 chr2R 24655145 24655212 412 18 7619 0.5 8.0 4.2 3.5 7677 chr2R 24647535 intergenic not near genes chr2R 24651374 intergenic not near genes chr2R 24655212 intergenic not near genes chr2R_18_24650001 chr2R_24650001 RAL-850 1478 chr2R 24689684 24689758 chr2R 24689823 24689897 24 134 7.0 4.5 5.8 3.5 213 chr2R 24689684 intergenic not near genes chr2R 24689790 intergenic not near genes chr2R 24689897 intergenic not near genes chr2R_24_24685001 chr2R_24685001 RAL-850 1479 chr2R 24727848 24727863 chr2R 24735396 24735400 mdg1 7 7547 29.0 12.0 20.5 0.3 7552 chr2R 24727848 intron Mid1 - chr2R 24731624 intron Mid1 - chr2R 24735400 intron Mid1 - chr2R_7_24730001 chr2R_24730001 RAL-850 1480 chr2R 24727866 24727913 chr2R 24735395 24735453 mdg1 31 7546 11.5 12.0 11.8 2.4 7587 chr2R 24727866 intron Mid1 - chr2R 24731660 intron Mid1 - chr2R 24735453 intron Mid1 - chr2R_31_24730001 chr2R_24730001 RAL-850 1481 chr2R 24763573 24763583 chr2R 24765595 24765603 G2 4 2021 18.0 14.0 16.0 0.2 2030 chr2R 24763573 exon CG3894 + chr2R 24764588 intron CG3894 + chr2R 24765603 exon CG3894 + chr2R_4_24760001 chr2R_24760001 RAL-850 1482 chr2R 24763586 24763597 chr2R 24765591 24765623 G2 9 2013 14.0 13.0 13.5 0.6 2037 chr2R 24763586 exon CG3894 + chr2R 24764604 intron CG3894 + chr2R 24765623 exon CG3894 + chr2R_9_24760001 chr2R_24760001 RAL-850 1483 chr2R 24763599 24763638 chr2R 24765590 24765632 G2 20 2016 10.5 12.5 11.5 1.6 2033 chr2R 24763599 exon CG3894 + chr2R 24764616 intron CG3894 + chr2R 24765632 exon CG3894 + chr2R_20_24760001 chr2R_24760001 RAL-850 1484 chr2R 24884003 24884078 chr2R 24884135 24884210 34 130 8.0 9.0 8.5 3.6 207 chr2R 24884003 intron NKAIN + chr2R 24884106 intron NKAIN + chr2R 24884210 intron NKAIN + chr2R_34_24880001 chr2R_24880001 RAL-850 1485 chr2R 24894578 24894646 chr2R 24895630 24895701 40 1049 15.5 14.0 14.8 2.5 1123 chr2R 24894578 exon NaCP60E + chr2R 24895140 intron NaCP60E + chr2R 24895701 intron NaCP60E + chr2R_40_24895001 chr2R_24895001 RAL-850 1486 chr2R 24933012 24933072 chr2R 24933441 24933501 32 431 81.0 63.5 72.2 0.4 489 chr2R 24933012 intron CG30427 - chr2R 24933256 intron CG30427 - chr2R 24933501 intron CG30427 - chr2R_32_24930001 chr2R_24930001 RAL-850 1487 chr2R 24955329 24955349 chr2R 24955479 24955494 8 148 25.0 12.0 18.5 0.4 165 chr2R 24955329 3` UTR CG12851 + chr2R 24955412 3` UTR CG12851 + chr2R 24955494 3` UTR CG12851 + chr2R_8_24955001 chr2R_24955001 RAL-850 1488 chr2R 24955353 24955408 chr2R 24955473 24955512 28 138 10.5 9.5 10.0 2.5 159 chr2R 24955353 3` UTR CG12851 + chr2R 24955432 3` UTR CG12851 + chr2R 24955512 3` UTR CG12851 + chr2R_28_24955001 chr2R_24955001 RAL-850 1489 chr2R 25004847 25004913 chr2R 25004975 25005036 37 127 7.5 11.0 9.2 3.6 189 chr2R 25004847 intron zip - chr2R 25004942 intron zip - chr2R 25005036 intron zip - chr2R_37_25000001 chr2R_25000001 RAL-850 1490 chr2R 25014503 25014553 chr2R 25014626 25014679 11 120 11.5 11.0 11.2 0.9 176 chr2R 25014503 intron uzip + chr2R 25014591 intron uzip + chr2R 25014679 intron uzip + chr2R_11_25010001 chr2R_25010001 RAL-850 1491 chr2R 25018299 25018360 chr2R 25018450 25018498 33 150 9.0 9.5 9.2 3.2 199 chr2R 25018299 intron uzip + chr2R 25018398 intron uzip + chr2R 25018498 intron uzip + chr2R_33_25015001 chr2R_25015001 RAL-850 1492 chr2R 25022594 25022669 chr2R 25022728 25022803 49 134 7.5 10.5 9.0 4.9 209 chr2R 25022594 intron uzip + chr2R 25022698 intron uzip + chr2R 25022803 intron uzip + chr2R_49_25020001 chr2R_25020001 RAL-850 1493 chr2R 25101228 25101300 chr2R 25101380 25101452 26 151 8.5 7.0 7.8 3.0 224 chr2R 25101228 intron lov - chr2R 25101340 intron lov - chr2R 25101452 intron lov - chr2R_26_25100001 chr2R_25100001 RAL-850 1494 chr2R 25141621 25141676 chr2R 25159361 25159416 roo 22 17740 8.0 9.5 8.8 2.2 17795 chr2R 25141621 intergenic not near genes chr2R 25150518 intergenic not near genes chr2R 25159416 intergenic not near genes chr2R_22_25150001 chr2R_25150001 RAL-850 1495 chr2R 25234720 25234792 chr2R 25234850 25234922 32 130 4.5 4.5 4.5 5.8 202 chr2R 25234720 intron CG9380 - chr2R 25234821 intron CG9380 - chr2R 25234922 intron CG9380 - chr2R_32_25230001 chr2R_25230001 RAL-850 1496 chr3L 34267 34341 chr3L 34605 34659 45 336 10.5 15.5 13.0 3.2 392 chr3L 34267 intergenic not near genes chr3L 34463 intergenic not near genes chr3L 34659 intergenic not near genes chr3L_45_30001 chr3L_30001 RAL-850 1497 chr3L 58886 58966 chr3L 59021 59101 45 135 8.5 7.5 8.0 5.0 215 chr3L 58886 intergenic not near genes chr3L 58994 intergenic not near genes chr3L 59101 intergenic not near genes chr3L_45_55001 chr3L_55001 RAL-850 1498 chr3L 75593 75666 chr3L 75733 75807 36 139 12.5 8.5 10.5 3.1 214 chr3L 75593 intergenic CG13405 - chr3L 75700 intergenic CG13405 - chr3L 75807 intergenic CG13405 - chr3L_36_75001 chr3L_75001 RAL-850 1499 chr3L 110169 110236 chr3L 119386 119453 roo 32 9217 11.0 8.0 9.5 3.0 9284 chr3L 110169 intergenic not near genes chr3L 114811 intergenic not near genes chr3L 119453 intergenic not near genes chr3L_32_110001 chr3L_110001 RAL-850 1500 chr3L 351946 352005 chr3L 352070 352129 32 127 9.0 13.5 11.2 2.6 183 chr3L 351946 intron Ptpmeg + chr3L 352038 intron Ptpmeg + chr3L 352129 intron Ptpmeg + chr3L_32_350001 chr3L_350001 RAL-850 1501 chr3L 365481 365545 chr3L 365617 365681 33 136 0.0 11.0 5.5 5.1 200 chr3L 365481 3` UTR CG1233 + chr3L 365581 3` UTR CG1233 + chr3L 365681 3` UTR,3` UTR CG1233 +,CG13884 - chr3L_33_365001 chr3L_365001 RAL-850 1502 chr3L 375197 375275 chr3L 375333 375409 17 132 1.0 9.5 5.2 2.7 212 chr3L 375197 intron trh - chr3L 375303 intron trh - chr3L 375409 intron trh - chr3L_17_375001 chr3L_375001 RAL-850 1503 chr3L 402653 402698 chr3L 409756 409801 297 23 7099 16.0 10.5 13.2 1.6 7148 chr3L 402653 intergenic not near genes chr3L 406227 intergenic not near genes chr3L 409801 intergenic not near genes chr3L_23_405001 chr3L_405001 RAL-850 1504 chr3L 402699 402710 chr3L 409750 409813 297 10 7096 11.5 10.0 10.8 0.8 7114 chr3L 402699 intergenic not near genes chr3L 406256 intergenic not near genes chr3L 409813 intergenic not near genes chr3L_10_405001 chr3L_405001 RAL-850 1505 chr3L 428141 428220 chr3L 428312 428357 9 160 5.5 0.0 2.8 2.4 216 chr3L 428141 intergenic not near genes chr3L 428249 intergenic not near genes chr3L 428357 intergenic not near genes chr3L_9_425001 chr3L_425001 RAL-850 1506 chr3L 508559 508579 chr3L 508736 508756 12 175 21.0 12.5 16.8 0.7 197 chr3L 508559 5` UTR klar - chr3L 508658 5` UTR klar - chr3L 508756 5` UTR klar - chr3L_12_505001 chr3L_505001 RAL-850 1507 chr3L 508580 508626 chr3L 508726 508797 30 175 8.0 8.0 8.0 3.3 217 chr3L 508580 5` UTR klar - chr3L 508688 5` UTR klar - chr3L 508797 5` UTR klar - chr3L_30_505001 chr3L_505001 RAL-850 1508 chr3L 524691 524777 chr3L 524825 524909 12 132 0.0 5.5 2.8 3.2 218 chr3L 524691 intron klar - chr3L 524800 intron klar - chr3L 524909 intron klar - chr3L_12_520001 chr3L_520001 RAL-850 1509 chr3L 534735 534806 chr3L 535038 535112 20 305 6.0 5.5 5.8 2.9 377 chr3L 534735 intron klar - chr3L 534924 intron klar - chr3L 535112 intron klar - chr3L_20_530001 chr3L_530001 RAL-850 1510 chr3L 563928 563996 chr3L 564157 564225 43 227 9.0 9.0 9.0 4.3 297 chr3L 563928 intron hipk + chr3L 564076 intron hipk + chr3L 564225 intron hipk + chr3L_43_560001 chr3L_560001 RAL-850 1511 chr3L 642443 642492 chr3L 642584 642633 26 141 8.0 10.0 9.0 2.6 190 chr3L 642443 5` UTR CR43334 + chr3L 642538 5` UTR CR43334 + chr3L 642633 5` UTR CR43334 + chr3L_26_640001 chr3L_640001 RAL-850 1512 chr3L 651347 651413 chr3L 651485 651551 36 137 16.0 14.0 15.0 2.2 204 chr3L 651347 intergenic Gale +,CG3402 - chr3L 651449 intergenic CG3402 -,Gale + chr3L 651551 3` UTR CG3402 - chr3L_36_650001 chr3L_650001 RAL-850 1513 chr3L 789863 789947 chr3L 790398 790483 roo 15 534 0.5 0.0 0.2 12.5 620 chr3L 789863 intergenic not near genes chr3L 790173 intergenic not near genes chr3L 790483 intergenic not near genes chr3L_15_790001 chr3L_790001 RAL-850 1514 chr3L 800648 800725 chr3L 800788 800848 18 136 6.0 7.0 6.5 2.4 200 chr3L 800648 intergenic not near genes chr3L 800748 intergenic not near genes chr3L 800848 intergenic not near genes chr3L_18_800001 chr3L_800001 RAL-850 1515 chr3L 802566 802566 chr3L 11777678 11777678 5 10975112 37.5 36.5 37.0 0.1 10975112 chr3L 802566 intergenic not near genes chr3L 6290122 intergenic not near genes chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_5_6290001 chr3L_6290001 RAL-850 1516 chr3L 822058 822073 chr3L 822188 822203 9 130 0.0 24.5 12.2 0.7 145 chr3L 822058 intergenic not near genes chr3L 822130 intergenic not near genes chr3L 822203 intergenic not near genes chr3L_9_820001 chr3L_820001 RAL-850 1517 chr3L 857963 858026 chr3L 866483 866557 Tirant 30 8518 12.5 8.0 10.2 2.7 8594 chr3L 857963 intergenic not near genes chr3L 862260 intergenic not near genes chr3L 866557 5` UTR CG12502 + chr3L_30_860001 chr3L_860001 RAL-850 1518 chr3L 901379 901441 chr3L 901513 901575 13 120 7.5 14.5 11.0 1.1 196 chr3L 901379 intergenic not near genes chr3L 901477 intergenic not near genes chr3L 901575 intergenic not near genes chr3L_13_900001 chr3L_900001 RAL-850 1519 chr3L 901442 901455 chr3L 901512 901564 5 108 6.5 14.5 10.5 0.4 122 chr3L 901442 intergenic not near genes chr3L 901503 intergenic not near genes chr3L 901564 intergenic not near genes chr3L_5_900001 chr3L_900001 RAL-850 1520 chr3L 905045 905090 chr3L 905179 905224 7 134 3.5 6.5 5.0 1.2 179 chr3L 905045 intergenic not near genes chr3L 905134 intergenic not near genes chr3L 905224 intergenic not near genes chr3L_7_905001 chr3L_905001 RAL-850 1521 chr3L 925132 925198 chr3L 932608 932674 mdg1 24 7473 8.5 3.5 6.0 3.4 7542 chr3L 925132 intron Glut1 + chr3L 928903 intron Glut1 + chr3L 932674 intron Glut1 + chr3L_24_925001 chr3L_925001 RAL-850 1522 chr3L 933858 933942 chr3L 934012 934095 36 153 4.5 7.0 5.8 5.3 237 chr3L 933858 intron Glut1 + chr3L 933976 intron Glut1 + chr3L 934095 intron Glut1 + chr3L_36_930001 chr3L_930001 RAL-850 1523 chr3L 939737 939740 chr3L 940908 940911 jockey 5 1171 20.0 11.5 15.8 0.3 1174 chr3L 939737 intron Glut1 + chr3L 940324 intron Glut1 + chr3L 940911 intron Glut1 + chr3L_5_940001 chr3L_940001 RAL-850 1524 chr3L 939745 939795 chr3L 940905 940933 jockey 21 1168 11.0 11.5 11.2 1.7 1188 chr3L 939745 intron Glut1 + chr3L 940339 intron Glut1 + chr3L 940933 intron Glut1 + chr3L_21_940001 chr3L_940001 RAL-850 1525 chr3L 958273 958340 chr3L 958405 958474 36 134 6.5 7.5 7.0 4.5 201 chr3L 958273 intron Glut1 + chr3L 958374 intron Glut1 + chr3L 958474 intron Glut1 + chr3L_36_955001 chr3L_955001 RAL-850 1526 chr3L 1015110 1015163 chr3L 1015240 1015293 11 129 0.5 10.0 5.2 1.8 183 chr3L 1015110 intron trio - chr3L 1015202 intron trio - chr3L 1015293 intron trio - chr3L_11_1015001 chr3L_1015001 RAL-850 1527 chr3L 1028767 1028834 chr3L 1028903 1028970 24 136 5.5 6.0 5.8 3.5 203 chr3L 1028767 intron trio - chr3L 1028868 intron trio - chr3L 1028970 intron trio - chr3L_24_1025001 chr3L_1025001 RAL-850 1528 chr3L 1031542 1031605 chr3L 1031658 1031718 24 113 8.5 9.0 8.8 2.4 176 chr3L 1031542 intron trio - chr3L 1031630 intron trio - chr3L 1031718 intron trio - chr3L_24_1030001 chr3L_1030001 RAL-850 1529 chr3L 1047320 1047380 chr3L 1055169 1055234 412 13 7839 7.0 5.5 6.2 1.8 7914 chr3L 1047320 intron bab1 - chr3L 1051277 intron bab1 - chr3L 1055234 intron bab1 - chr3L_13_1050001 chr3L_1050001 RAL-850 1530 chr3L 1109586 1109660 chr3L 1109723 1109798 31 137 14.5 8.5 11.5 2.5 212 chr3L 1109586 intergenic not near genes chr3L 1109692 intergenic not near genes chr3L 1109798 intergenic not near genes chr3L_31_1105001 chr3L_1105001 RAL-850 1531 chr3L 1154080 1154159 chr3L 1163283 1163333 roo 27 9197 8.0 8.0 8.0 3.0 9253 chr3L 1154080 intron bab2 - chr3L 1158706 intron bab2 - chr3L 1163333 intron bab2 - chr3L_27_1155001 chr3L_1155001 RAL-850 1532 chr3L 1166973 1167003 chr3L 1167100 1167130 13 127 5.5 9.5 7.5 1.5 157 chr3L 1166973 intron bab2 - chr3L 1167052 intron bab2 - chr3L 1167130 intron bab2 - chr3L_13_1165001 chr3L_1165001 RAL-850 1533 chr3L 1175675 1175755 chr3L 1175857 1175891 22 170 3.5 5.5 4.5 4.0 216 chr3L 1175675 intron bab2 - chr3L 1175783 intron bab2 - chr3L 1175891 intron bab2 - chr3L_22_1175001 chr3L_1175001 RAL-850 1534 chr3L 1189564 1189613 chr3L 1189674 1189742 27 126 6.5 9.0 7.8 3.1 178 chr3L 1189564 intergenic CG13912 + chr3L 1189653 5` UTR CG13912 + chr3L 1189742 5` UTR CG13912 + chr3L_27_1185001 chr3L_1185001 RAL-850 1535 chr3L 1219562 1219619 chr3L 1227327 1227377 412 26 7772 8.0 11.0 9.5 2.5 7815 chr3L 1219562 intron mwh + chr3L 1223470 intron mwh + chr3L 1227377 intron mwh + chr3L_26_1220001 chr3L_1220001 RAL-850 1536 chr3L 1236188 1236232 chr3L 1236315 1236359 17 125 4.5 3.0 3.8 3.5 171 chr3L 1236188 intron CG9194 + chr3L 1236274 intron CG9194 + chr3L 1236359 intron CG9194 + chr3L_17_1235001 chr3L_1235001 RAL-850 1537 chr3L 1257619 1257655 chr3L 1257749 1257768 17 129 1.0 14.0 7.5 2.0 149 chr3L 1257619 intron CG9134 + chr3L 1257694 intron CG9134 + chr3L 1257768 intron CG9134 + chr3L_17_1255001 chr3L_1255001 RAL-850 1538 chr3L 1347113 1347121 chr3L 1347248 1347256 6 135 23.5 7.5 15.5 0.4 143 chr3L 1347113 intron Ptp61F - chr3L 1347184 intron Ptp61F - chr3L 1347256 intron Ptp61F - chr3L_6_1345001 chr3L_1345001 RAL-850 1539 chr3L 1347124 1347187 chr3L 1347243 1347305 34 126 8.0 7.5 7.8 3.9 181 chr3L 1347124 intron Ptp61F - chr3L 1347214 intron Ptp61F - chr3L 1347305 intron Ptp61F - chr3L_34_1345001 chr3L_1345001 RAL-850 1540 chr3L 1356960 1357007 chr3L 1357089 1357146 14 127 9.5 11.5 10.5 1.2 186 chr3L 1356960 intron Ptp61F - chr3L 1357053 intron Ptp61F - chr3L 1357146 intron Ptp61F - chr3L_14_1355001 chr3L_1355001 RAL-850 1541 chr3L 1385124 1385194 chr3L 1385261 1385331 24 136 8.0 4.0 6.0 3.4 207 chr3L 1385124 intron,intron Ptp61F -,ru + chr3L 1385228 intron,intron Ptp61F -,ru + chr3L 1385331 intron,intron Ptp61F -,ru + chr3L_24_1385001 chr3L_1385001 RAL-850 1542 chr3L 1396689 1396759 chr3L 1396823 1396889 32 130 8.0 10.0 9.0 3.2 200 chr3L 1396689 intron Ptp61F - chr3L 1396789 intron Ptp61F - chr3L 1396889 intron Ptp61F - chr3L_32_1395001 chr3L_1395001 RAL-850 1543 chr3L 1415729 1415748 chr3L 1415861 1415880 8 131 18.0 12.0 15.0 0.5 151 chr3L 1415729 intron Ptp61F - chr3L 1415804 intron Ptp61F - chr3L 1415880 intron Ptp61F - chr3L_8_1415001 chr3L_1415001 RAL-850 1544 chr3L 1415749 1415799 chr3L 1415860 1415913 22 121 8.5 12.0 10.2 2.0 164 chr3L 1415749 intron Ptp61F - chr3L 1415831 intron Ptp61F - chr3L 1415913 intron Ptp61F - chr3L_22_1415001 chr3L_1415001 RAL-850 1545 chr3L 1424757 1424766 chr3L 1430025 1430063 Rt1a 7 5294 0.0 12.0 6.0 1.0 5306 chr3L 1424757 intron Ptp61F - chr3L 1427410 intron Ptp61F - chr3L 1430063 intron Ptp61F - chr3L_7_1425001 chr3L_1425001 RAL-850 1546 chr3L 1485691 1485743 chr3L 1486908 1486918 1360 19 1209 12.5 26.0 19.2 0.9 1227 chr3L 1485691 intron stet - chr3L 1486304 intron stet - chr3L 1486918 intron stet - chr3L_19_1485001 chr3L_1485001 RAL-850 1547 chr3L 1505958 1506021 chr3L 1513601 1513668 17.6 23 7645 10.0 9.0 9.5 2.2 7710 chr3L 1505958 intron,intron Psa +,cue - chr3L 1509813 intron,intron Psa +,cue - chr3L 1513668 intron,intron Psa +,cue - chr3L_23_1505001 chr3L_1505001 RAL-850 1548 chr3L 1536836 1536886 chr3L 1536970 1537020 27 133 4.5 10.0 7.2 3.3 184 chr3L 1536836 intergenic CG12091 -,CG7852 + chr3L 1536928 intergenic CG12091 -,CG7852 + chr3L 1537020 intergenic CG7852 +,CG12091 - chr3L_27_1535001 chr3L_1535001 RAL-850 1549 chr3L 1571199 1571493 chr3L 1571330 1571629 34 132 4.0 12.5 8.2 3.7 430 chr3L 1571199 intron CG12004 + chr3L 1571414 intron CG12004 + chr3L 1571629 intron CG12004 + chr3L_34_1570001 chr3L_1570001 RAL-850 1550 chr3L 1584107 1584125 chr3L 1584239 1584257 11 132 0.0 8.5 4.2 2.1 150 chr3L 1584107 intron CG13917 + chr3L 1584182 intron CG13917 + chr3L 1584257 intron CG13917 + chr3L_11_1580001 chr3L_1580001 RAL-850 1551 chr3L 1585883 1585929 chr3L 1586014 1586060 16 131 8.5 0.0 4.2 3.1 177 chr3L 1585883 intron CG13917 + chr3L 1585972 intron CG13917 + chr3L 1586060 intron CG13917 + chr3L_16_1585001 chr3L_1585001 RAL-850 1552 chr3L 1631016 1631055 chr3L 1631140 1631182 20 121 22.0 23.5 22.8 0.8 166 chr3L 1631016 3` UTR nSyb - chr3L 1631099 3` UTR nSyb - chr3L 1631182 3` UTR nSyb - chr3L_20_1630001 chr3L_1630001 RAL-850 1553 chr3L 1701947 1702015 chr3L 1702075 1702142 6 126 2.5 1.0 1.8 2.1 195 chr3L 1701947 intron,intron CG7991 +,CG13931 - chr3L 1702044 intron,intron CG7991 +,CG13931 - chr3L 1702142 intron,intron CG7991 +,CG13931 - chr3L_6_1700001 chr3L_1700001 RAL-850 1554 chr3L 1704816 1704898 chr3L 1705097 1705145 20 275 8.5 0.0 4.2 3.8 329 chr3L 1704816 intron CG7991 + chr3L 1704980 intron CG7991 + chr3L 1705145 intron CG7991 + chr3L_20_1700001 chr3L_1700001 RAL-850 1555 chr3L 1740814 1740880 chr3L 1741107 1741127 pogo 22 287 12.5 12.0 12.2 1.7 313 chr3L 1740814 intron Gk + chr3L 1740970 intron Gk + chr3L 1741127 intron Gk + chr3L_22_1740001 chr3L_1740001 RAL-850 1556 chr3L 1848598 1848667 chr3L 1848726 1848795 24 127 7.5 4.0 5.8 3.5 197 chr3L 1848598 intergenic not near genes chr3L 1848696 intergenic not near genes chr3L 1848795 intergenic not near genes chr3L_24_1845001 chr3L_1845001 RAL-850 1557 chr3L 1853024 1853054 chr3L 1853151 1853181 9 127 6.5 15.5 11.0 0.8 157 chr3L 1853024 intron CG13936 - chr3L 1853102 intron CG13936 - chr3L 1853181 intron CG13936 - chr3L_9_1850001 chr3L_1850001 RAL-850 1558 chr3L 1882315 1882382 chr3L 1882461 1882527 29 145 5.0 6.5 5.8 4.3 212 chr3L 1882315 intron CG13937 - chr3L 1882421 intron CG13937 - chr3L 1882527 intron CG13937 - chr3L_29_1880001 chr3L_1880001 RAL-850 1559 chr3L 1885238 1885313 chr3L 1885372 1885447 25 134 5.0 7.5 6.2 3.5 209 chr3L 1885238 intergenic Aprt -,Tmhs + chr3L 1885342 intergenic Tmhs +,Aprt - chr3L 1885447 intergenic Tmhs +,Aprt - chr3L_25_1885001 chr3L_1885001 RAL-850 1560 chr3L 1922402 1922415 chr3L 1922532 1922540 5 129 18.0 14.0 16.0 0.3 138 chr3L 1922402 intron Dbx + chr3L 1922471 intron Dbx + chr3L 1922540 intron Dbx + chr3L_5_1920001 chr3L_1920001 RAL-850 1561 chr3L 1922418 1922442 chr3L 1922530 1922571 16 125 12.0 14.0 13.0 1.1 153 chr3L 1922418 intron Dbx + chr3L 1922494 intron Dbx + chr3L 1922571 intron Dbx + chr3L_16_1920001 chr3L_1920001 RAL-850 1562 chr3L 1991075 1991152 chr3L 1991201 1991279 15 123 8.5 5.5 7.0 1.9 204 chr3L 1991075 intergenic not near genes chr3L 1991177 intergenic not near genes chr3L 1991279 intergenic not near genes chr3L_15_1990001 chr3L_1990001 RAL-850 1563 chr3L 2006420 2006495 chr3L 2006550 2006625 27 128 11.0 10.5 10.8 2.3 205 chr3L 2006420 intergenic not near genes chr3L 2006522 intergenic not near genes chr3L 2006625 intergenic not near genes chr3L_27_2005001 chr3L_2005001 RAL-850 1564 chr3L 2035219 2035301 chr3L 2035345 2035432 26 129 8.0 2.0 5.0 4.3 213 chr3L 2035219 intergenic not near genes chr3L 2035326 intergenic not near genes chr3L 2035432 intergenic not near genes chr3L_26_2035001 chr3L_2035001 RAL-850 1565 chr3L 2108210 2108273 chr3L 2113464 2113527 copia 23 5254 7.0 11.5 9.2 2.3 5317 chr3L 2108210 intron sls - chr3L 2110868 intron sls - chr3L 2113527 intron sls - chr3L_23_2110001 chr3L_2110001 RAL-850 1566 chr3L 2139158 2139234 chr3L 2139289 2139365 41 130 8.5 10.0 9.2 4.0 207 chr3L 2139158 intron zormin - chr3L 2139262 intron zormin - chr3L 2139365 intron zormin - chr3L_41_2135001 chr3L_2135001 RAL-850 1567 chr3L 2165422 2165447 chr3L 2167288 2167343 12 1891 12.5 15.5 14.0 0.8 1921 chr3L 2165422 intergenic not near genes chr3L 2166382 intergenic not near genes chr3L 2167343 intergenic CG15879 - chr3L_12_2165001 chr3L_2165001 RAL-850 1568 chr3L 2199036 2199092 chr3L 2199162 2199208 28 117 14.0 17.0 15.5 1.7 172 chr3L 2199036 intergenic not near genes chr3L 2199122 intergenic not near genes chr3L 2199208 intergenic not near genes chr3L_28_2195001 chr3L_2195001 RAL-850 1569 chr3L 2199760 2199820 chr3L 2199886 2199946 22 126 5.0 7.5 6.2 3.1 186 chr3L 2199760 intergenic not near genes chr3L 2199853 intergenic not near genes chr3L 2199946 intergenic not near genes chr3L_22_2195001 chr3L_2195001 RAL-850 1570 chr3L 2216554 2216615 chr3L 2216814 2216832 15 248 3.0 6.5 4.8 2.6 278 chr3L 2216554 intergenic not near genes chr3L 2216693 intergenic not near genes chr3L 2216832 intergenic not near genes chr3L_15_2215001 chr3L_2215001 RAL-850 1571 chr3L 2278994 2279068 chr3L 2279195 2279265 27 196 0.0 8.5 4.2 5.2 271 chr3L 2278994 intergenic not near genes chr3L 2279130 intergenic not near genes chr3L 2279265 intergenic not near genes chr3L_27_2275001 chr3L_2275001 RAL-850 1572 chr3L 2302521 2302597 chr3L 2302658 2302734 18 136 8.0 6.0 7.0 2.2 213 chr3L 2302521 intergenic not near genes chr3L 2302628 intergenic not near genes chr3L 2302734 intergenic not near genes chr3L_18_2300001 chr3L_2300001 RAL-850 1573 chr3L 2303074 2303138 chr3L 2303286 2303338 17 208 5.5 8.0 6.8 2.2 264 chr3L 2303074 intergenic not near genes chr3L 2303206 intergenic not near genes chr3L 2303338 intergenic not near genes chr3L_17_2300001 chr3L_2300001 RAL-850 1574 chr3L 2317516 2317592 chr3L 2319380 2319456 40 1863 10.0 7.5 8.8 4.1 1940 chr3L 2317516 3` UTR CR45427 - chr3L 2318486 intergenic not near genes chr3L 2319456 3` UTR CR45426 - chr3L_40_2315001 chr3L_2315001 RAL-850 1575 chr3L 2331543 2331610 chr3L 2331670 2331737 37 126 14.5 12.0 13.2 2.6 194 chr3L 2331543 intron MsR1 + chr3L 2331640 intron MsR1 + chr3L 2331737 intron MsR1 + chr3L_37_2330001 chr3L_2330001 RAL-850 1576 chr3L 2355401 2355451 chr3L 2355639 2355689 13 236 4.0 0.0 2.0 4.3 288 chr3L 2355401 intergenic not near genes chr3L 2355545 intergenic not near genes chr3L 2355689 intergenic not near genes chr3L_13_2355001 chr3L_2355001 RAL-850 1577 chr3L 2411295 2411339 chr3L 2411425 2411469 16 124 3.0 10.0 6.5 2.1 174 chr3L 2411295 intron CG45186 + chr3L 2411382 intron CG45186 + chr3L 2411469 intron CG45186 + chr3L_16_2410001 chr3L_2410001 RAL-850 1578 chr3L 2447462 2447472 chr3L 2456668 2456673 roo 4 9205 15.0 14.5 14.8 0.3 9211 chr3L 2447462 intron CG45186 + chr3L 2452068 intron CG45186 + chr3L 2456673 intron CG45186 + chr3L_4_2450001 chr3L_2450001 RAL-850 1579 chr3L 2447474 2447532 chr3L 2456665 2456732 roo 26 9200 6.5 14.0 10.2 2.3 9258 chr3L 2447474 intron CG45186 + chr3L 2452103 intron CG45186 + chr3L 2456732 intron CG45186 + chr3L_26_2450001 chr3L_2450001 RAL-850 1580 chr3L 2467445 2467485 chr3L 2467592 2467641 4 152 5.5 5.0 5.2 0.6 196 chr3L 2467445 intron CG45186 + chr3L 2467543 intron CG45186 + chr3L 2467641 intron CG45186 + chr3L_4_2465001 chr3L_2465001 RAL-850 1581 chr3L 2515348 2515429 chr3L 2515480 2515561 21 132 5.0 8.0 6.5 2.8 213 chr3L 2515348 intron Spn - chr3L 2515454 intron Spn - chr3L 2515561 intron Spn - chr3L_21_2515001 chr3L_2515001 RAL-850 1582 chr3L 2560959 2560982 chr3L 2561086 2561109 9 127 4.5 15.5 10.0 0.8 150 chr3L 2560959 intron msn - chr3L 2561034 intron msn - chr3L 2561109 intron msn - chr3L_9_2560001 chr3L_2560001 RAL-850 1583 chr3L 2575963 2575983 chr3L 2576092 2576116 11 131 14.5 9.5 12.0 0.8 153 chr3L 2575963 intron msn - chr3L 2576040 intron msn - chr3L 2576116 intron msn - chr3L_11_2575001 chr3L_2575001 RAL-850 1584 chr3L 2609628 2609651 chr3L 2609754 2609777 11 126 10.5 0.0 5.2 1.8 149 chr3L 2609628 intron Pxn - chr3L 2609702 intron Pxn - chr3L 2609777 intron Pxn - chr3L_11_2605001 chr3L_2605001 RAL-850 1585 chr3L 2683905 2683973 chr3L 2684031 2684099 26 125 8.0 7.5 7.8 3.0 194 chr3L 2683905 intron Fife - chr3L 2684002 intron Fife - chr3L 2684099 intron Fife - chr3L_26_2680001 chr3L_2680001 RAL-850 1586 chr3L 2719493 2719559 chr3L 2719645 2719711 27 151 6.0 5.5 5.8 4.0 218 chr3L 2719493 3` UTR Mrtf - chr3L 2719602 3` UTR Mrtf - chr3L 2719711 3` UTR Mrtf - chr3L_27_2715001 chr3L_2715001 RAL-850 1587 chr3L 2751413 2751454 chr3L 2755758 2755799 F-element 18 4345 5.0 10.0 7.5 2.1 4386 chr3L 2751413 intron Mrtf - chr3L 2753606 intron Mrtf - chr3L 2755799 intron Mrtf - chr3L_18_2750001 chr3L_2750001 RAL-850 1588 chr3L 2795681 2795745 chr3L 2795855 2795872 11 169 5.5 4.0 4.8 1.9 191 chr3L 2795681 intron CG43444 - chr3L 2795776 intron CG43444 - chr3L 2795872 intron CG43444 - chr3L_11_2795001 chr3L_2795001 RAL-850 1589 chr3L 2835822 2835856 chr3L 2835960 2835994 14 134 11.5 11.0 11.2 1.1 172 chr3L 2835822 intron CG43444 - chr3L 2835908 intron CG43444 - chr3L 2835994 intron CG43444 - chr3L_14_2835001 chr3L_2835001 RAL-850 1590 chr3L 2854429 2854503 chr3L 2854557 2854630 31 119 8.0 9.0 8.5 3.3 201 chr3L 2854429 intron CG43444 - chr3L 2854530 intron CG43444 - chr3L 2854630 intron CG43444 - chr3L_31_2850001 chr3L_2850001 RAL-850 1591 chr3L 2856246 2856306 chr3L 2856382 2856437 7 132 3.0 0.0 1.5 2.8 191 chr3L 2856246 intron CG43444 - chr3L 2856342 intron CG43444 - chr3L 2856437 intron CG43444 - chr3L_7_2855001 chr3L_2855001 RAL-850 1592 chr3L 2873097 2873126 chr3L 2873213 2873253 19 125 9.5 15.5 12.5 1.4 156 chr3L 2873097 intron CG43444 - chr3L 2873175 intron CG43444 - chr3L 2873253 intron CG43444 - chr3L_19_2870001 chr3L_2870001 RAL-850 1593 chr3L 2873535 2873609 chr3L 2873665 2873739 29 129 9.5 3.5 6.5 3.9 204 chr3L 2873535 intron CG43444 - chr3L 2873637 intron CG43444 - chr3L 2873739 intron CG43444 - chr3L_29_2870001 chr3L_2870001 RAL-850 1594 chr3L 2900476 2900532 chr3L 2900595 2900642 20 123 8.5 10.0 9.2 2.0 166 chr3L 2900476 intron Shab + chr3L 2900559 intron Shab + chr3L 2900642 intron Shab + chr3L_20_2900001 chr3L_2900001 RAL-850 1595 chr3L 2927795 2927859 chr3L 2936122 2936151 Tirant 27 8325 10.0 6.5 8.2 2.9 8356 chr3L 2927795 intron Shab + chr3L 2931973 intron Shab + chr3L 2936151 intron Shab + chr3L_27_2930001 chr3L_2930001 RAL-850 1596 chr3L 2966686 2966731 chr3L 2974160 2974211 mdg1 6 7477 8.5 4.0 6.2 0.8 7525 chr3L 2966686 intergenic not near genes chr3L 2970448 intergenic not near genes chr3L 2974211 intergenic not near genes chr3L_6_2970001 chr3L_2970001 RAL-850 1597 chr3L 3028958 3029023 chr3L 3029094 3029159 13 136 4.5 4.0 4.2 2.5 201 chr3L 3028958 intergenic not near genes chr3L 3029058 intergenic not near genes chr3L 3029159 intergenic not near genes chr3L_13_3025001 chr3L_3025001 RAL-850 1598 chr3L 3040278 3040350 chr3L 3042117 3042189 S-element 21 1838 8.0 4.0 6.0 3.0 1911 chr3L 3040278 3` UTR CG2162 + chr3L 3041234 intergenic not near genes chr3L 3042189 intergenic Jafrac2 + chr3L_21_3040001 chr3L_3040001 RAL-850 1599 chr3L 3051700 3051750 chr3L 3051992 3052045 pogo 13 293 13.5 10.0 11.8 1.0 345 chr3L 3051700 3` UTR CG32485 + chr3L 3051872 intergenic CG32485 + chr3L 3052045 intergenic CG32485 +,CG1271 + chr3L_13_3050001 chr3L_3050001 RAL-850 1600 chr3L 3061252 3061313 chr3L 3069868 3069914 Tirant 16 8614 6.0 4.5 5.2 2.6 8662 chr3L 3061252 intron CG32486 - chr3L 3065583 intron CG32486 - chr3L 3069914 intron CG32486 - chr3L_16_3065001 chr3L_3065001 RAL-850 1601 chr3L 3084435 3084500 chr3L 3084567 3084632 30 132 10.5 10.5 10.5 2.6 197 chr3L 3084435 intron CG11486 + chr3L 3084534 intron CG11486 + chr3L 3084632 intron CG11486 + chr3L_30_3080001 chr3L_3080001 RAL-850 1602 chr3L 3128140 3128215 chr3L 3128276 3128351 39 135 7.5 4.5 6.0 5.6 211 chr3L 3128140 intergenic prominin-like - chr3L 3128246 intergenic not near genes chr3L 3128351 intergenic CG11537 - chr3L_39_3125001 chr3L_3125001 RAL-850 1603 chr3L 3259579 3259830 chr3L 3259724 3259980 39 144 6.0 7.0 6.5 5.2 401 chr3L 3259579 intron ckd + chr3L 3259780 intron ckd + chr3L 3259980 intron ckd + chr3L_39_3255001 chr3L_3255001 RAL-850 1604 chr3L 3269056 3269128 chr3L 3269197 3269269 16 141 2.0 7.0 4.5 2.9 213 chr3L 3269056 intergenic CG34265 + chr3L 3269162 intergenic CG34265 + chr3L 3269269 intergenic CG34265 + chr3L_16_3265001 chr3L_3265001 RAL-850 1605 chr3L 3281404 3281419 chr3L 3281945 3281948 Doc 4 540 26.5 17.0 21.8 0.2 544 chr3L 3281404 intron CG12017 + chr3L 3281676 intron CG12017 + chr3L 3281948 intron CG12017 + chr3L_4_3280001 chr3L_3280001 RAL-850 1606 chr3L 3281421 3281449 chr3L 3281940 3281995 Doc 19 535 14.5 16.0 15.2 1.2 574 chr3L 3281421 intron CG12017 + chr3L 3281708 intron CG12017 + chr3L 3281995 intron CG12017 + chr3L_19_3280001 chr3L_3280001 RAL-850 1607 chr3L 3281454 3281468 chr3L 3281934 3282014 Doc 17 533 11.5 12.5 12.0 1.3 560 chr3L 3281454 intron CG12017 + chr3L 3281734 intron CG12017 + chr3L 3282014 intron CG12017 + chr3L_17_3280001 chr3L_3280001 RAL-850 1608 chr3L 3294085 3294131 chr3L 3294226 3294272 21 140 13.0 5.0 9.0 2.1 187 chr3L 3294085 intron CG12009 + chr3L 3294178 intron CG12009 + chr3L 3294272 intron CG12009 + chr3L_21_3290001 chr3L_3290001 RAL-850 1609 chr3L 3307742 3307802 chr3L 3308288 3308294 25 556 8.5 8.0 8.2 2.7 552 chr3L 3307742 intron ZnT63C + chr3L 3308018 intron ZnT63C + chr3L 3308294 intron ZnT63C + chr3L_25_3305001 chr3L_3305001 RAL-850 1610 chr3L 3389357 3389419 chr3L 3389485 3389547 18 124 6.5 8.0 7.2 2.2 190 chr3L 3389357 intergenic not near genes chr3L 3389452 intergenic not near genes chr3L 3389547 intergenic not near genes chr3L_18_3385001 chr3L_3385001 RAL-850 1611 chr3L 3449215 3449235 chr3L 3449343 3449363 11 128 8.0 4.0 6.0 1.6 148 chr3L 3449215 intron eIF5B - chr3L 3449289 intron eIF5B - chr3L 3449363 intron eIF5B - chr3L_11_3445001 chr3L_3445001 RAL-850 1612 chr3L 3470125 3470184 chr3L 3470251 3470310 21 126 1.5 8.5 5.0 3.5 185 chr3L 3470125 intron CG14971 - chr3L 3470218 intron CG14971 - chr3L 3470310 intron CG14971 - chr3L_21_3470001 chr3L_3470001 RAL-850 1613 chr3L 3475025 3475085 chr3L 3475520 3475564 jockey 8 490 7.0 8.5 7.8 0.9 539 chr3L 3475025 intron CG42324 + chr3L 3475294 intron CG42324 + chr3L 3475564 intron CG42324 + chr3L_8_3475001 chr3L_3475001 RAL-850 1614 chr3L 3483493 3483566 chr3L 3483750 3483823 39 256 8.0 8.0 8.0 4.3 330 chr3L 3483493 intron CG42324 + chr3L 3483658 intron CG42324 + chr3L 3483823 intron CG42324 + chr3L_39_3480001 chr3L_3480001 RAL-850 1615 chr3L 3484242 3484316 chr3L 3484384 3484458 30 141 3.0 1.0 2.0 10.0 216 chr3L 3484242 intron,exon CG42324 +,CG43074 - chr3L 3484350 intron,exon CG42324 +,CG43074 - chr3L 3484458 intron,exon CG42324 +,CG43074 - chr3L_30_3480001 chr3L_3480001 RAL-850 1616 chr3L 3494152 3494202 chr3L 3494279 3494329 19 127 0.0 9.0 4.5 3.5 177 chr3L 3494152 intron CG42324 + chr3L 3494240 intron CG42324 + chr3L 3494329 intron CG42324 + chr3L_19_3490001 chr3L_3490001 RAL-850 1617 chr3L 3503973 3503989 chr3L 3504131 3504147 7 158 0.0 16.0 8.0 0.8 174 chr3L 3503973 intron CG42324 + chr3L 3504060 intron CG42324 + chr3L 3504147 intron CG42324 + chr3L_7_3500001 chr3L_3500001 RAL-850 1618 chr3L 3566356 3566424 chr3L 3566489 3566557 30 133 8.5 6.0 7.2 3.7 201 chr3L 3566356 intron Eip63E + chr3L 3566456 intron Eip63E + chr3L 3566557 intron Eip63E + chr3L_30_3565001 chr3L_3565001 RAL-850 1619 chr3L 3580214 3580293 chr3L 3580543 3580618 18 326 5.5 9.0 7.2 2.2 404 chr3L 3580214 intron Eip63E + chr3L 3580416 intron Eip63E + chr3L 3580618 intron Eip63E + chr3L_18_3580001 chr3L_3580001 RAL-850 1620 chr3L 3601258 3601322 chr3L 3606619 3606683 copia 21 5360 7.5 9.0 8.2 2.3 5425 chr3L 3601258 intron Eip63E + chr3L 3603970 intron Eip63E + chr3L 3606683 intron Eip63E + chr3L_21_3600001 chr3L_3600001 RAL-850 1621 chr3L 3619363 3619432 chr3L 3619507 3619576 25 144 6.5 5.0 5.8 3.7 213 chr3L 3619363 intergenic not near genes chr3L 3619470 intergenic not near genes chr3L 3619576 intergenic not near genes chr3L_25_3615001 chr3L_3615001 RAL-850 1622 chr3L 3627186 3627258 chr3L 3627341 3627413 32 155 6.0 9.5 7.8 3.6 227 chr3L 3627186 intron dar1 + chr3L 3627300 intron dar1 + chr3L 3627413 intron dar1 + chr3L_32_3625001 chr3L_3625001 RAL-850 1623 chr3L 3670519 3670585 chr3L 3670657 3670723 25 138 12.5 6.0 9.2 2.5 204 chr3L 3670519 intergenic not near genes chr3L 3670621 intergenic not near genes chr3L 3670723 intergenic not near genes chr3L_25_3670001 chr3L_3670001 RAL-850 1624 chr3L 3691257 3691275 chr3L 3691405 3691423 12 148 8.0 0.0 4.0 2.4 166 chr3L 3691257 intergenic not near genes chr3L 3691340 intergenic not near genes chr3L 3691423 intergenic not near genes chr3L_12_3690001 chr3L_3690001 RAL-850 1625 chr3L 3766687 3766746 chr3L 3766823 3766882 11 136 8.0 0.5 4.2 2.1 195 chr3L 3766687 intron CG32264 - chr3L 3766784 intron CG32264 - chr3L 3766882 intron CG32264 - chr3L_11_3765001 chr3L_3765001 RAL-850 1626 chr3L 3815001 3815081 chr3L 3815132 3815212 19 130 4.5 7.5 6.0 2.7 211 chr3L 3815001 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815106 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815212 intron,3` UTR Scsalpha +,CR43932 - chr3L_19_3815001 chr3L_3815001 RAL-850 1627 chr3L 3833738 3833770 chr3L 3834029 3834061 pogo 7 291 7.0 8.0 7.5 0.8 323 chr3L 3833738 intron enc + chr3L 3833900 intron enc + chr3L 3834061 intron enc + chr3L_7_3830001 chr3L_3830001 RAL-850 1628 chr3L 3849435 3849475 chr3L 3849563 3849603 10 128 6.5 10.5 8.5 1.1 168 chr3L 3849435 intron Awh + chr3L 3849519 intron Awh + chr3L 3849603 intron Awh + chr3L_10_3845001 chr3L_3845001 RAL-850 1629 chr3L 3864798 3864852 chr3L 3864931 3864985 19 132 10.5 7.5 9.0 1.9 187 chr3L 3864798 intergenic CR45379 - chr3L 3864892 intergenic CR45379 - chr3L 3864985 intergenic not near genes chr3L_19_3860001 chr3L_3860001 RAL-850 1630 chr3L 3877424 3877449 chr3L 3877602 3877627 11 178 10.0 14.5 12.2 0.8 203 chr3L 3877424 intergenic not near genes chr3L 3877526 intergenic not near genes chr3L 3877627 intergenic not near genes chr3L_11_3875001 chr3L_3875001 RAL-850 1631 chr3L 3889109 3889132 chr3L 3889242 3889265 13 133 0.5 12.0 6.2 1.8 156 chr3L 3889109 intergenic not near genes chr3L 3889187 intergenic not near genes chr3L 3889265 intergenic not near genes chr3L_13_3885001 chr3L_3885001 RAL-850 1632 chr3L 3925960 3926043 chr3L 3926101 3926186 10 143 5.0 0.5 2.8 2.6 226 chr3L 3925960 intron Eip63F-1 - chr3L 3926073 intron Eip63F-1 - chr3L 3926186 intron Eip63F-1 - chr3L_10_3925001 chr3L_3925001 RAL-850 1633 chr3L 3935803 3935842 chr3L 3935931 3935970 15 128 0.0 1.5 0.8 8.3 167 chr3L 3935803 5` UTR Eip63F-2 + chr3L 3935886 5` UTR Eip63F-2 + chr3L 3935970 5` UTR Eip63F-2 + chr3L_15_3935001 chr3L_3935001 RAL-850 1634 chr3L 3946141 3946219 chr3L 3946268 3946346 25 125 5.5 5.5 5.5 3.8 205 chr3L 3946141 exon CG14982 + chr3L 3946244 3` UTR CG14982 + chr3L 3946346 3` UTR CG14982 + chr3L_25_3945001 chr3L_3945001 RAL-850 1635 chr3L 4050741 4050809 chr3L 4050862 4050940 28 123 6.5 6.5 6.5 3.7 199 chr3L 4050741 intron CG1136 + chr3L 4050840 intron CG1136 + chr3L 4050940 intron CG1136 + chr3L_28_4050001 chr3L_4050001 RAL-850 1636 chr3L 4146802 4146835 chr3L 4146934 4146967 10 132 0.0 13.5 6.8 1.3 165 chr3L 4146802 intergenic not near genes chr3L 4146884 intergenic not near genes chr3L 4146967 intergenic not near genes chr3L_10_4145001 chr3L_4145001 RAL-850 1637 chr3L 4170122 4170167 chr3L 4170249 4170295 9 128 6.0 7.0 6.5 1.2 173 chr3L 4170122 intergenic Ero1L + chr3L 4170208 intergenic Ero1L + chr3L 4170295 intergenic Ero1L + chr3L_9_4170001 chr3L_4170001 RAL-850 1638 chr3L 4195087 4195168 chr3L 4195241 4195286 30 149 5.0 8.0 6.5 4.0 199 chr3L 4195087 exon CG43367 + chr3L 4195186 intron CG43367 + chr3L 4195286 intron CG43367 + chr3L_30_4195001 chr3L_4195001 RAL-850 1639 chr3L 4235616 4235629 chr3L 4235745 4235758 11 128 19.5 0.0 9.8 1.0 142 chr3L 4235616 intron ImpL2 - chr3L 4235687 intron ImpL2 - chr3L 4235758 intron ImpL2 - chr3L_11_4235001 chr3L_4235001 RAL-850 1640 chr3L 4306943 4306984 chr3L 4307086 4307127 9 143 13.0 1.5 7.2 1.1 184 chr3L 4306943 intron dyl - chr3L 4307035 intron dyl - chr3L 4307127 intron dyl - chr3L_9_4305001 chr3L_4305001 RAL-850 1641 chr3L 4328695 4328753 chr3L 4336243 4336301 412 23 7548 6.0 9.0 7.5 2.7 7606 chr3L 4328695 intron Cip4 - chr3L 4332498 intron Cip4 - chr3L 4336301 exon Cip4 - chr3L_23_4330001 chr3L_4330001 RAL-850 1642 chr3L 4341331 4341336 chr3L 21448026 21448027 6 17106694 38.5 38.0 38.2 0.2 17106696 chr3L 4341331 intron Cip4 - chr3L 12894679 3` UTR CG14118 + chr3L 21448027 3` UTR Syx7 + chr3L_6_12890001 chr3L_12890001 RAL-850 1643 chr3L 4343461 4343517 chr3L 4343591 4343664 13 144 5.5 0.0 2.8 3.4 203 chr3L 4343461 intron Cip4 - chr3L 4343562 intron Cip4 - chr3L 4343664 intron Cip4 - chr3L_13_4340001 chr3L_4340001 RAL-850 1644 chr3L 4364152 4364219 chr3L 4364291 4364358 8 139 3.0 3.0 3.0 2.0 206 chr3L 4364152 intergenic Cip4 -,mRpS6 + chr3L 4364255 intergenic Cip4 -,mRpS6 + chr3L 4364358 intergenic mRpS6 +,Cip4 - chr3L_8_4360001 chr3L_4360001 RAL-850 1645 chr3L 4607217 4607291 chr3L 4607358 4607432 23 140 9.5 9.5 9.5 2.2 215 chr3L 4607217 intron Src64B - chr3L 4607324 intron Src64B - chr3L 4607432 intron Src64B - chr3L_23_4605001 chr3L_4605001 RAL-850 1646 chr3L 4754706 4754768 chr3L 4754832 4754894 18 125 7.5 7.0 7.2 2.2 188 chr3L 4754706 intron RhoGEF64C + chr3L 4754800 intron RhoGEF64C + chr3L 4754894 intron RhoGEF64C + chr3L_18_4750001 chr3L_4750001 RAL-850 1647 chr3L 4824800 4824813 chr3L 4824938 4824939 5 136 10.5 0.0 5.2 0.8 139 chr3L 4824800 intron Dhc64C - chr3L 4824870 intron Dhc64C - chr3L 4824939 intron Dhc64C - chr3L_5_4820001 chr3L_4820001 RAL-850 1648 chr3L 4858260 4858334 chr3L 4858398 4858424 37 132 9.0 7.5 8.2 4.0 164 chr3L 4858260 intergenic not near genes chr3L 4858342 intergenic not near genes chr3L 4858424 intergenic not near genes chr3L_37_4855001 chr3L_4855001 RAL-850 1649 chr3L 4901089 4901146 chr3L 4907329 4907386 diver 17 6239 11.0 12.5 11.8 1.3 6297 chr3L 4901089 intergenic CG13704 + chr3L 4904238 intergenic not near genes chr3L 4907386 intergenic not near genes chr3L_17_4900001 chr3L_4900001 RAL-850 1650 chr3L 4926048 4926123 chr3L 4926177 4926227 21 127 8.0 6.0 7.0 2.6 179 chr3L 4926048 intergenic not near genes chr3L 4926138 intergenic not near genes chr3L 4926227 intergenic not near genes chr3L_21_4925001 chr3L_4925001 RAL-850 1651 chr3L 4958371 4958441 chr3L 4958509 4958579 23 133 5.0 9.5 7.2 2.8 208 chr3L 4958371 intron Con - chr3L 4958475 intron Con - chr3L 4958579 intron Con - chr3L_23_4955001 chr3L_4955001 RAL-850 1652 chr3L 5020659 5020666 chr3L 5020788 5020795 4 129 0.0 5.5 2.8 1.1 136 chr3L 5020659 intron Con - chr3L 5020727 intron Con - chr3L 5020795 intron Con - chr3L_4_5020001 chr3L_5020001 RAL-850 1653 chr3L 5034116 5034184 chr3L 5043318 5043386 roo 20 9202 5.0 6.5 5.8 2.9 9270 chr3L 5034116 intron Con - chr3L 5038751 intron Con - chr3L 5043386 intron Con - chr3L_20_5035001 chr3L_5035001 RAL-850 1654 chr3L 5045410 5045476 chr3L 5050241 5050307 Doc 13 4831 10.0 8.0 9.0 1.3 4897 chr3L 5045410 5` UTR Con - chr3L 5047858 intron Con - chr3L 5050307 intron Con - chr3L_13_5045001 chr3L_5045001 RAL-850 1655 chr3L 5066282 5066309 chr3L 5066431 5066458 14 149 1.0 5.0 3.0 3.5 176 chr3L 5066282 intron Con - chr3L 5066370 intron Con - chr3L 5066458 intron Con - chr3L_14_5065001 chr3L_5065001 RAL-850 1656 chr3L 5080937 5080945 chr3L 5081067 5081074 4 130 6.0 0.0 3.0 1.0 137 chr3L 5080937 intergenic not near genes chr3L 5081006 intergenic not near genes chr3L 5081074 intergenic not near genes chr3L_4_5080001 chr3L_5080001 RAL-850 1657 chr3L 5104432 5104505 chr3L 5124616 5124689 25 20184 6.0 7.5 6.8 3.2 20257 chr3L 5104432 intergenic not near genes chr3L 5114560 intergenic not near genes chr3L 5124689 intergenic not near genes chr3L_25_5110001 chr3L_5110001 RAL-850 1658 chr3L 5225015 5225062 chr3L 5225177 5225226 6 164 3.0 2.0 2.5 1.7 211 chr3L 5225015 intron shep - chr3L 5225120 intron shep - chr3L 5225226 intron shep - chr3L_6_5225001 chr3L_5225001 RAL-850 1659 chr3L 5228988 5229047 chr3L 5229459 5229518 20 471 7.5 3.5 5.5 3.1 530 chr3L 5228988 intron shep - chr3L 5229253 intron shep - chr3L 5229518 intron shep - chr3L_20_5225001 chr3L_5225001 RAL-850 1660 chr3L 5251810 5251870 chr3L 5251939 5251999 13 129 6.5 8.5 7.5 1.5 189 chr3L 5251810 intron shep - chr3L 5251904 intron shep - chr3L 5251999 intron shep - chr3L_13_5250001 chr3L_5250001 RAL-850 1661 chr3L 5299124 5299174 chr3L 5306600 5306650 Quasimodo 4 7476 2.5 0.0 1.2 1.8 7526 chr3L 5299124 intergenic not near genes chr3L 5302887 intergenic not near genes chr3L 5306650 intergenic not near genes chr3L_4_5300001 chr3L_5300001 RAL-850 1662 chr3L 5306664 5306676 chr3L 5306803 5306815 7 139 0.0 0.5 0.2 5.8 151 chr3L 5306664 intergenic not near genes chr3L 5306740 intergenic not near genes chr3L 5306815 intergenic not near genes chr3L_7_5305001 chr3L_5305001 RAL-850 1663 chr3L 5349371 5349438 chr3L 5349583 5349650 19 212 43.5 49.0 46.2 0.4 279 chr3L 5349371 intron lama - chr3L 5349510 intron lama - chr3L 5349650 intron lama - chr3L_19_5345001 chr3L_5345001 RAL-850 1664 chr3L 5393424 5393437 chr3L 5393636 5393649 6 212 13.0 5.0 9.0 0.6 225 chr3L 5393424 intergenic not near genes chr3L 5393536 intergenic not near genes chr3L 5393649 intergenic not near genes chr3L_6_5390001 chr3L_5390001 RAL-850 1665 chr3L 5427312 5427372 chr3L 5427967 5428027 14 655 6.0 8.5 7.2 1.7 715 chr3L 5427312 intron CG34391 + chr3L 5427670 intron CG34391 + chr3L 5428027 intron CG34391 + chr3L_14_5425001 chr3L_5425001 RAL-850 1666 chr3L 5458065 5458092 chr3L 5466716 5466716 Max-element 8 8648 5.5 14.0 9.8 0.7 8651 chr3L 5458065 intergenic not near genes chr3L 5462390 intergenic not near genes chr3L 5466716 intergenic not near genes chr3L_8_5460001 chr3L_5460001 RAL-850 1667 chr3L 5482941 5483077 chr3L 5483182 5483246 10 174 0.0 16.5 8.2 1.1 305 chr3L 5482941 exon CG4835 + chr3L 5483094 exon CG4835 + chr3L 5483246 exon CG4835 + chr3L_10_5480001 chr3L_5480001 RAL-850 1668 chr3L 5498351 5498421 chr3L 5498484 5498526 13 133 0.0 5.0 2.5 3.7 175 chr3L 5498351 exon blanks - chr3L 5498438 exon blanks - chr3L 5498526 exon blanks - chr3L_13_5495001 chr3L_5495001 RAL-850 1669 chr3L 5521445 5521526 chr3L 5521584 5521610 40 135 7.0 6.0 6.5 5.3 165 chr3L 5521445 intron Lkr - chr3L 5521528 intron Lkr - chr3L 5521610 intron Lkr - chr3L_40_5520001 chr3L_5520001 RAL-850 1670 chr3L 5537687 5537744 chr3L 5538079 5538136 jockey 29 391 9.0 13.0 11.0 2.4 449 chr3L 5537687 intergenic not near genes chr3L 5537912 intergenic CG10625 - chr3L 5538136 intergenic CG10625 - chr3L_29_5535001 chr3L_5535001 RAL-850 1671 chr3L 5561619 5561686 chr3L 5561750 5561818 13 132 1.5 4.0 2.8 3.4 199 chr3L 5561619 intergenic sinu -,Sucb - chr3L 5561718 3` UTR Sucb - chr3L 5561818 3` UTR Sucb - chr3L_13_5560001 chr3L_5560001 RAL-850 1672 chr3L 5597785 5597832 chr3L 5597915 5597962 12 130 9.5 0.5 5.0 2.0 177 chr3L 5597785 intergenic CG5150 + chr3L 5597874 intergenic CG5150 + chr3L 5597962 intergenic not near genes chr3L_12_5595001 chr3L_5595001 RAL-850 1673 chr3L 5613452 5613498 chr3L 5613629 5613675 16 177 7.0 9.5 8.2 1.7 223 chr3L 5613452 intergenic not near genes chr3L 5613564 intergenic not near genes chr3L 5613675 intergenic not near genes chr3L_16_5610001 chr3L_5610001 RAL-850 1674 chr3L 5726834 5726893 chr3L 5726991 5727050 24 156 7.5 13.5 10.5 2.1 216 chr3L 5726834 intron sif + chr3L 5726942 intron sif + chr3L 5727050 intron sif + chr3L_24_5725001 chr3L_5725001 RAL-850 1675 chr3L 5909991 5910057 chr3L 5910282 5910348 pogo 38 291 11.0 9.5 10.2 3.4 357 chr3L 5909991 intron CG13288 + chr3L 5910170 intron CG13288 + chr3L 5910348 intron CG13288 + chr3L_38_5910001 chr3L_5910001 RAL-850 1676 chr3L 5926271 5926342 chr3L 5926511 5926584 BS 19 231 8.0 8.0 8.0 2.1 313 chr3L 5926271 intron Vap-33B + chr3L 5926428 intron Vap-33B + chr3L 5926584 intron Vap-33B + chr3L_19_5925001 chr3L_5925001 RAL-850 1677 chr3L 5940037 5940060 chr3L 5940179 5940180 12 137 19.5 14.5 17.0 0.7 143 chr3L 5940037 intron CG33993 - chr3L 5940108 intron CG33993 - chr3L 5940180 intron CG33993 - chr3L_12_5940001 chr3L_5940001 RAL-850 1678 chr3L 5940062 5940112 chr3L 5940171 5940189 20 120 7.0 12.5 9.8 1.9 127 chr3L 5940062 intron CG33993 - chr3L 5940126 intron CG33993 - chr3L 5940189 intron CG33993 - chr3L_20_5940001 chr3L_5940001 RAL-850 1679 chr3L 6001639 6001717 chr3L 6004389 6004467 jockey 18 2750 5.0 0.0 2.5 5.1 2828 chr3L 6001639 intron PVRAP + chr3L 6003053 intron PVRAP + chr3L 6004467 intron PVRAP + chr3L_18_6000001 chr3L_6000001 RAL-850 1680 chr3L 6040316 6040374 chr3L 6042722 6042780 Doc 24 2405 10.5 8.0 9.2 2.4 2464 chr3L 6040316 intergenic Jon65Aiv + chr3L 6041548 intergenic not near genes chr3L 6042780 intergenic not near genes chr3L_24_6040001 chr3L_6040001 RAL-850 1681 chr3L 6052087 6052152 chr3L 6052223 6052288 15 135 3.5 5.5 4.5 2.7 201 chr3L 6052087 intergenic Jon65Aii +,Jon65Aiii + chr3L 6052188 intergenic Jon65Aii +,Jon65Aiii + chr3L 6052288 intergenic Jon65Aii + chr3L_15_6050001 chr3L_6050001 RAL-850 1682 chr3L 6052625 6052661 chr3L 6052740 6052770 16 116 18.5 17.0 17.8 0.9 145 chr3L 6052625 exon Jon65Aii + chr3L 6052698 intron Jon65Aii + chr3L 6052770 exon Jon65Aii + chr3L_16_6050001 chr3L_6050001 RAL-850 1683 chr3L 6119139 6119172 chr3L 6119266 6119299 11 127 7.0 11.5 9.2 1.1 160 chr3L 6119139 exon Ets65A + chr3L 6119219 intron Ets65A + chr3L 6119299 intron Ets65A + chr3L_11_6115001 chr3L_6115001 RAL-850 1684 chr3L 6124352 6124373 chr3L 6124504 6124517 5 151 1.5 14.5 8.0 0.6 165 chr3L 6124352 exon l(3)mbn - chr3L 6124434 exon l(3)mbn - chr3L 6124517 exon l(3)mbn - chr3L_5_6120001 chr3L_6120001 RAL-850 1685 chr3L 6155669 6155711 chr3L 6155805 6155847 15 136 9.0 0.5 4.8 2.6 178 chr3L 6155669 intergenic CR45421 - chr3L 6155758 intergenic not near genes chr3L 6155847 intergenic not near genes chr3L_15_6155001 chr3L_6155001 RAL-850 1686 chr3L 6169083 6169132 chr3L 6169214 6169261 12 127 18.5 14.0 16.2 0.7 178 chr3L 6169083 3` UTR CG10289 - chr3L 6169172 3` UTR CG10289 - chr3L 6169261 3` UTR CG10289 - chr3L_12_6165001 chr3L_6165001 RAL-850 1687 chr3L 6220875 6220935 chr3L 6230077 6230137 roo 33 9201 8.5 8.5 8.5 3.5 9262 chr3L 6220875 5` UTR pncr008:3L + chr3L 6225506 intergenic not near genes chr3L 6230137 intergenic not near genes chr3L_33_6225001 chr3L_6225001 RAL-850 1688 chr3L 6220936 6220941 chr3L 6230068 6230143 roo 4 9184 7.5 7.5 7.5 0.5 9207 chr3L 6220936 5` UTR pncr008:3L + chr3L 6225540 intergenic not near genes chr3L 6230143 intergenic not near genes chr3L_4_6225001 chr3L_6225001 RAL-850 1689 chr3L 6278164 6278223 chr3L 6278289 6278349 8 126 6.0 2.0 4.0 1.6 185 chr3L 6278164 intergenic not near genes chr3L 6278256 intergenic not near genes chr3L 6278349 intergenic not near genes chr3L_8_6275001 chr3L_6275001 RAL-850 1690 chr3L 6334966 6335029 chr3L 6335487 6335550 297 28 517 9.5 9.0 9.2 2.7 584 chr3L 6334966 intron CG13300 - chr3L 6335258 intron CG13300 - chr3L 6335550 intron CG13300 - chr3L_28_6335001 chr3L_6335001 RAL-850 1691 chr3L 6388796 6388856 chr3L 6388941 6388968 16 137 6.5 5.0 5.8 2.4 172 chr3L 6388796 intergenic not near genes chr3L 6388882 intergenic not near genes chr3L 6388968 intergenic not near genes chr3L_16_6385001 chr3L_6385001 RAL-850 1692 chr3L 6405619 6405678 chr3L 6432133 6432192 roo 16 26514 9.5 7.0 8.2 1.7 26573 chr3L 6405619 intron CG42747 + chr3L 6418906 intron CG42747 + chr3L 6432192 intron CG42747 + chr3L_16_6415001 chr3L_6415001 RAL-850 1693 chr3L 6512220 6512281 chr3L 6512356 6512417 11 129 5.5 4.0 4.8 1.9 197 chr3L 6512220 intron sfl + chr3L 6512318 intron sfl + chr3L 6512417 intron sfl + chr3L_11_6510001 chr3L_6510001 RAL-850 1694 chr3L 6562833 6562860 chr3L 6562963 6562990 11 130 6.0 17.0 11.5 0.9 157 chr3L 6562833 intron CG18769 + chr3L 6562912 intron CG18769 + chr3L 6562990 intron CG18769 + chr3L_11_6560001 chr3L_6560001 RAL-850 1695 chr3L 6575492 6575567 chr3L 6575701 6575776 35 209 6.5 6.5 6.5 4.7 284 chr3L 6575492 intron,intron CG18769 +,jv - chr3L 6575634 intron,intron CG18769 +,jv - chr3L 6575776 intron,intron CG18769 +,jv - chr3L_35_6575001 chr3L_6575001 RAL-850 1696 chr3L 6589632 6589644 chr3L 6590016 6590029 4 382 19.0 11.5 15.2 0.2 397 chr3L 6589632 intron CG18769 + chr3L 6589830 intron CG18769 + chr3L 6590029 intron CG18769 + chr3L_4_6585001 chr3L_6585001 RAL-850 1697 chr3L 6589645 6589654 chr3L 6590015 6590023 4 382 17.0 11.5 14.2 0.3 378 chr3L 6589645 intron CG18769 + chr3L 6589834 intron CG18769 + chr3L 6590023 intron CG18769 + chr3L_4_6585001 chr3L_6585001 RAL-850 1698 chr3L 6589655 6589679 chr3L 6590010 6590033 16 367 11.0 11.0 11.0 1.3 378 chr3L 6589655 intron CG18769 + chr3L 6589844 intron CG18769 + chr3L 6590033 intron CG18769 + chr3L_16_6585001 chr3L_6585001 RAL-850 1699 chr3L 6604288 6604293 chr3L 6604415 6604420 5 127 0.5 17.5 9.0 0.5 132 chr3L 6604288 intron CG8368 + chr3L 6604354 intron CG8368 + chr3L 6604420 intron,3` UTR CG8368 +,zpg - chr3L_5_6600001 chr3L_6600001 RAL-850 1700 chr3L 6620563 6620602 chr3L 6621053 6621066 Rt1c 23 487 5.0 21.0 13.0 1.6 503 chr3L 6620563 intergenic not near genes chr3L 6620814 intergenic not near genes chr3L 6621066 intergenic not near genes chr3L_23_6620001 chr3L_6620001 RAL-850 1701 chr3L 6652031 6652108 chr3L 6652159 6652236 44 127 11.0 9.5 10.2 3.9 205 chr3L 6652031 intergenic not near genes chr3L 6652134 intergenic not near genes chr3L 6652236 intergenic not near genes chr3L_44_6650001 chr3L_6650001 RAL-850 1702 chr3L 6657397 6657468 chr3L 6657599 6657647 23 199 9.5 8.5 9.0 2.3 250 chr3L 6657397 intergenic not near genes chr3L 6657522 intergenic not near genes chr3L 6657647 intergenic not near genes chr3L_23_6655001 chr3L_6655001 RAL-850 1703 chr3L 6726802 6726819 chr3L 6726928 6726945 8 126 0.0 6.5 3.2 1.9 143 chr3L 6726802 intergenic not near genes chr3L 6726874 intergenic not near genes chr3L 6726945 intergenic not near genes chr3L_8_6725001 chr3L_6725001 RAL-850 1704 chr3L 6781077 6781152 chr3L 6783140 6783212 Doc 12 2060 5.0 0.0 2.5 3.4 2135 chr3L 6781077 intergenic not near genes chr3L 6782144 intergenic not near genes chr3L 6783212 intergenic not near genes chr3L_12_6780001 chr3L_6780001 RAL-850 1705 chr3L 6807495 6807524 chr3L 6807735 6807764 12 240 9.0 9.5 9.2 1.2 269 chr3L 6807495 intergenic not near genes chr3L 6807630 intergenic not near genes chr3L 6807764 intergenic not near genes chr3L_12_6805001 chr3L_6805001 RAL-850 1706 chr3L 6808841 6808914 chr3L 6809355 6809429 11 513 8.0 6.5 7.2 1.3 588 chr3L 6808841 intergenic not near genes chr3L 6809135 intergenic not near genes chr3L 6809429 intergenic not near genes chr3L_11_6805001 chr3L_6805001 RAL-850 1707 chr3L 6835885 6835923 chr3L 6836013 6836051 12 127 7.0 8.0 7.5 1.4 166 chr3L 6835885 intergenic not near genes chr3L 6835968 intergenic not near genes chr3L 6836051 intergenic not near genes chr3L_12_6835001 chr3L_6835001 RAL-850 1708 chr3L 6844327 6844384 chr3L 6844523 6844580 21 196 4.5 12.5 8.5 2.2 253 chr3L 6844327 intergenic not near genes chr3L 6844454 intergenic not near genes chr3L 6844580 intergenic not near genes chr3L_21_6840001 chr3L_6840001 RAL-850 1709 chr3L 6855885 6855946 chr3L 6860719 6860780 Doc 26 4829 4.5 11.0 7.8 3.0 4895 chr3L 6855885 intergenic not near genes chr3L 6858332 intergenic not near genes chr3L 6860780 intergenic not near genes chr3L_26_6855001 chr3L_6855001 RAL-850 1710 chr3L 6868669 6868743 chr3L 6868797 6868871 20 128 0.0 5.0 2.5 5.7 202 chr3L 6868669 intergenic not near genes chr3L 6868770 intergenic not near genes chr3L 6868871 intergenic not near genes chr3L_20_6865001 chr3L_6865001 RAL-850 1711 chr3L 6887476 6887537 chr3L 6895018 6895079 roo 21 7541 8.0 8.0 8.0 2.3 7603 chr3L 6887476 intergenic not near genes chr3L 6891278 intergenic not near genes chr3L 6895079 intergenic not near genes chr3L_21_6890001 chr3L_6890001 RAL-850 1712 chr3L 6898643 6898693 chr3L 6898831 6898881 9 188 6.5 6.0 6.2 1.2 238 chr3L 6898643 intergenic not near genes chr3L 6898762 intergenic not near genes chr3L 6898881 intergenic not near genes chr3L_9_6895001 chr3L_6895001 RAL-850 1713 chr3L 6907968 6908046 chr3L 6908103 6908174 25 129 7.5 0.5 4.0 5.0 206 chr3L 6907968 intergenic not near genes chr3L 6908071 intergenic not near genes chr3L 6908174 intergenic not near genes chr3L_25_6905001 chr3L_6905001 RAL-850 1714 chr3L 6934326 6934337 chr3L 6934487 6934498 6 161 9.0 2.0 5.5 0.9 172 chr3L 6934326 exon CG14820 + chr3L 6934412 intron CG14820 + chr3L 6934498 exon CG14820 + chr3L_6_6930001 chr3L_6930001 RAL-850 1715 chr3L 6942032 6942071 chr3L 6942181 6942220 15 149 9.5 7.5 8.5 1.6 188 chr3L 6942032 intergenic not near genes chr3L 6942126 intergenic not near genes chr3L 6942220 intergenic not near genes chr3L_15_6940001 chr3L_6940001 RAL-850 1716 chr3L 6974440 6974516 chr3L 6974591 6974667 13 151 3.5 7.0 5.2 2.1 227 chr3L 6974440 exon Galphai - chr3L 6974554 intron Galphai - chr3L 6974667 intron Galphai - chr3L_13_6970001 chr3L_6970001 RAL-850 1717 chr3L 6994846 6994914 chr3L 6995497 6995574 BS 6 656 1.5 3.5 2.5 1.7 728 chr3L 6994846 intergenic bin + chr3L 6995210 intergenic not near genes chr3L 6995574 intergenic not near genes chr3L_6_6995001 chr3L_6995001 RAL-850 1718 chr3L 7001948 7001975 chr3L 7002119 7002146 6 171 11.0 7.5 9.2 0.6 198 chr3L 7001948 intron Mp + chr3L 7002047 intron Mp + chr3L 7002146 intron Mp + chr3L_6_7000001 chr3L_7000001 RAL-850 1719 chr3L 7021978 7022051 chr3L 7022231 7022309 8 252 0.0 6.5 3.2 1.9 331 chr3L 7021978 intron Mp + chr3L 7022144 intron Mp + chr3L 7022309 intron Mp + chr3L_8_7020001 chr3L_7020001 RAL-850 1720 chr3L 7033123 7033135 chr3L 7033253 7033265 4 130 21.0 9.5 15.2 0.2 142 chr3L 7033123 intron Mp + chr3L 7033194 intron Mp + chr3L 7033265 intron Mp + chr3L_4_7030001 chr3L_7030001 RAL-850 1721 chr3L 7033138 7033199 chr3L 7033251 7033331 19 126 10.5 10.0 10.2 1.7 193 chr3L 7033138 intron Mp + chr3L 7033234 intron Mp + chr3L 7033331 intron Mp + chr3L_19_7030001 chr3L_7030001 RAL-850 1722 chr3L 7041873 7041925 chr3L 7042000 7042051 30 126 9.5 9.0 9.2 2.9 178 chr3L 7041873 intron Mp + chr3L 7041962 intron Mp + chr3L 7042051 intron Mp + chr3L_30_7040001 chr3L_7040001 RAL-850 1723 chr3L 7086791 7086845 chr3L 7086920 7086975 5 129 9.0 0.0 4.5 0.9 184 chr3L 7086791 intergenic Cpr65Ea - chr3L 7086883 intergenic Cpr65Ea - chr3L 7086975 intergenic Cpr65Ea - chr3L_5_7085001 chr3L_7085001 RAL-850 1724 chr3L 7112544 7112603 chr3L 7112681 7112740 22 136 15.5 11.5 13.5 1.5 196 chr3L 7112544 intron form3 + chr3L 7112642 intron form3 + chr3L 7112740 intron form3 + chr3L_22_7110001 chr3L_7110001 RAL-850 1725 chr3L 7129912 7129977 chr3L 7130154 7130218 BS 14 242 0.5 10.5 5.5 2.2 306 chr3L 7129912 intergenic CG15829 + chr3L 7130065 intergenic CG15829 + chr3L 7130218 intergenic not near genes chr3L_14_7130001 chr3L_7130001 RAL-850 1726 chr3L 7150866 7150895 chr3L 7150990 7151021 19 126 7.5 15.5 11.5 1.5 155 chr3L 7150866 intron corn - chr3L 7150944 intron corn - chr3L 7151021 intron corn - chr3L_19_7150001 chr3L_7150001 RAL-850 1727 chr3L 7174987 7175060 chr3L 7175267 7175340 25 279 6.0 10.5 8.2 2.7 353 chr3L 7174987 intron Dscam2 - chr3L 7175164 intron Dscam2 - chr3L 7175340 intron Dscam2 - chr3L_25_7175001 chr3L_7175001 RAL-850 1728 chr3L 7244899 7244965 chr3L 7245030 7245091 27 132 7.5 6.5 7.0 3.4 192 chr3L 7244899 exon mei-P22 + chr3L 7244995 exon mei-P22 + chr3L 7245091 exon mei-P22 + chr3L_27_7240001 chr3L_7240001 RAL-850 1729 chr3L 7258881 7258932 chr3L 7259071 7259122 14 190 5.0 6.5 5.8 2.1 241 chr3L 7258881 intron CG14830 - chr3L 7259002 intron CG14830 - chr3L 7259122 intron CG14830 - chr3L_14_7255001 chr3L_7255001 RAL-850 1730 chr3L 7277066 7277132 chr3L 7277218 7277284 21 152 9.5 7.5 8.5 2.2 218 chr3L 7277066 exon unc-13-4A - chr3L 7277175 intron unc-13-4A - chr3L 7277284 intron unc-13-4A - chr3L_21_7275001 chr3L_7275001 RAL-850 1731 chr3L 7285279 7285351 chr3L 7285439 7285513 28 161 6.0 9.0 7.5 3.3 234 chr3L 7285279 intron unc-13-4A - chr3L 7285396 intron unc-13-4A - chr3L 7285513 intron unc-13-4A - chr3L_28_7285001 chr3L_7285001 RAL-850 1732 chr3L 7310228 7310302 chr3L 7310364 7310403 28 129 9.0 7.5 8.2 3.0 175 chr3L 7310228 intron unc-13-4A - chr3L 7310316 intron unc-13-4A - chr3L 7310403 intron unc-13-4A - chr3L_28_7310001 chr3L_7310001 RAL-850 1733 chr3L 7358251 7358326 chr3L 7359584 7359645 42 1329 40.0 58.0 49.0 0.8 1394 chr3L 7358251 exon pst - chr3L 7358948 exon pst - chr3L 7359645 intron pst - chr3L_42_7355001 chr3L_7355001 RAL-850 1734 chr3L 7357185 7357192 chr3L 7360255 7360262 4 3071 56.5 43.0 49.8 0.1 3077 chr3L 7357185 intergenic pst -,CTCF - chr3L 7358724 exon pst - chr3L 7360262 5` UTR pst - chr3L_4_7355001 chr3L_7355001 RAL-850 1735 chr3L 7357180 7357221 chr3L 7360263 7360291 16 3074 62.0 41.5 51.8 0.3 3111 chr3L 7357180 intergenic pst -,CTCF - chr3L 7358736 exon pst - chr3L 7360291 intergenic pst -,Sec63 + chr3L_16_7355001 chr3L_7355001 RAL-850 1736 chr3L 7377271 7377341 chr3L 7380425 7380496 297 37 3155 6.5 15.5 11.0 3.1 3225 chr3L 7377271 intron SMSr - chr3L 7378884 intron SMSr - chr3L 7380496 intron SMSr - chr3L_37_7375001 chr3L_7375001 RAL-850 1737 chr3L 7403566 7403642 chr3L 7403695 7403769 17 129 10.0 6.0 8.0 1.9 203 chr3L 7403566 exon CG8560 - chr3L 7403668 intron CG8560 - chr3L 7403769 intron CG8560 - chr3L_17_7400001 chr3L_7400001 RAL-850 1738 chr3L 7408176 7408204 chr3L 7408310 7408327 16 131 8.5 10.0 9.2 1.6 151 chr3L 7408176 intergenic CR44525 - chr3L 7408252 intergenic CR44525 - chr3L 7408327 intergenic CR44525 - chr3L_16_7405001 chr3L_7405001 RAL-850 1739 chr3L 7408205 7408245 chr3L 7408309 7408357 20 117 2.5 10.0 6.2 2.8 152 chr3L 7408205 intergenic CR44525 - chr3L 7408281 intergenic CR44525 - chr3L 7408357 intergenic CR44525 - chr3L_20_7405001 chr3L_7405001 RAL-850 1740 chr3L 7461630 7461694 chr3L 7461763 7461846 21 151 7.5 0.0 3.8 4.4 216 chr3L 7461630 intergenic not near genes chr3L 7461738 intergenic not near genes chr3L 7461846 intergenic not near genes chr3L_21_7460001 chr3L_7460001 RAL-850 1741 chr3L 7462912 7462946 chr3L 7463069 7463104 7 158 0.0 7.0 3.5 1.6 192 chr3L 7462912 intergenic not near genes chr3L 7463008 intergenic not near genes chr3L 7463104 intergenic not near genes chr3L_7_7460001 chr3L_7460001 RAL-850 1742 chr3L 7488818 7488891 chr3L 7488949 7489022 25 130 8.0 4.5 6.2 3.5 204 chr3L 7488818 intergenic not near genes chr3L 7488920 intergenic not near genes chr3L 7489022 intergenic not near genes chr3L_25_7485001 chr3L_7485001 RAL-850 1743 chr3L 7498699 7498746 chr3L 7503555 7503602 F-element 15 4856 6.5 9.0 7.8 1.7 4903 chr3L 7498699 5` UTR CG8539 - chr3L 7501150 intergenic not near genes chr3L 7503602 intergenic not near genes chr3L_15_7500001 chr3L_7500001 RAL-850 1744 chr3L 7505388 7505443 chr3L 7505514 7505569 20 126 10.5 14.0 12.2 1.5 181 chr3L 7505388 intergenic CG7548 - chr3L 7505478 intergenic CG7548 - chr3L 7505569 3` UTR CG7548 - chr3L_20_7505001 chr3L_7505001 RAL-850 1745 chr3L 7560300 7560378 chr3L 7560589 7560637 41 285 10.5 7.5 9.0 4.1 337 chr3L 7560300 intergenic CG14837 - chr3L 7560468 intergenic CG14837 - chr3L 7560637 intergenic not near genes chr3L_41_7560001 chr3L_7560001 RAL-850 1746 chr3L 7560629 7560643 chr3L 7560753 7560761 4 122 17.5 21.5 19.5 0.2 132 chr3L 7560629 intergenic not near genes chr3L 7560695 intergenic not near genes chr3L 7560761 intergenic not near genes chr3L_4_7560001 chr3L_7560001 RAL-850 1747 chr3L 7574795 7574858 chr3L 7574935 7574985 4 137 0.0 0.5 0.2 3.3 190 chr3L 7574795 intergenic not near genes chr3L 7574890 intergenic not near genes chr3L 7574985 intergenic not near genes chr3L_4_7570001 chr3L_7570001 RAL-850 1748 chr3L 7576172 7576242 chr3L 7576310 7576380 34 137 7.0 13.5 10.2 3.0 208 chr3L 7576172 intergenic not near genes chr3L 7576276 intergenic not near genes chr3L 7576380 intergenic not near genes chr3L_34_7575001 chr3L_7575001 RAL-850 1749 chr3L 7581588 7581614 chr3L 7581722 7581748 14 132 14.0 14.0 14.0 0.9 160 chr3L 7581588 intergenic not near genes chr3L 7581668 intergenic not near genes chr3L 7581748 intergenic not near genes chr3L_14_7580001 chr3L_7580001 RAL-850 1750 chr3L 7581616 7581653 chr3L 7581715 7581787 13 120 3.5 13.0 8.2 1.4 171 chr3L 7581616 intergenic not near genes chr3L 7581702 intergenic not near genes chr3L 7581787 intergenic not near genes chr3L_13_7580001 chr3L_7580001 RAL-850 1751 chr3L 7593664 7593738 chr3L 7593805 7593879 31 141 8.0 8.5 8.2 3.4 215 chr3L 7593664 intron CG33275 + chr3L 7593772 intron CG33275 + chr3L 7593879 intron CG33275 + chr3L_31_7590001 chr3L_7590001 RAL-850 1752 chr3L 7707491 7707520 chr3L 7707613 7707643 25 129 15.0 11.0 13.0 1.8 152 chr3L 7707491 intron,intron CG32373 +,Ank2 - chr3L 7707567 intron,intron CG32373 +,Ank2 - chr3L 7707643 intron,exon CG32373 +,Ank2 - chr3L_25_7705001 chr3L_7705001 RAL-850 1753 chr3L 7707523 7707531 chr3L 7707643 7707664 9 130 12.5 21.0 16.8 0.5 141 chr3L 7707523 intron,intron CG32373 +,Ank2 - chr3L 7707594 intron,intron CG32373 +,Ank2 - chr3L 7707664 intron,exon CG32373 +,Ank2 - chr3L_9_7705001 chr3L_7705001 RAL-850 1754 chr3L 7751271 7751287 chr3L 7751378 7751409 5 115 24.0 9.0 16.5 0.3 138 chr3L 7751271 intron CG32373 + chr3L 7751340 intron CG32373 + chr3L 7751409 intron CG32373 + chr3L_5_7750001 chr3L_7750001 RAL-850 1755 chr3L 7751288 7751328 chr3L 7751372 7751434 24 119 13.5 9.0 11.2 2.0 146 chr3L 7751288 intron CG32373 + chr3L 7751361 intron CG32373 + chr3L 7751434 intron CG32373 + chr3L_24_7750001 chr3L_7750001 RAL-850 1756 chr3L 7793670 7793734 chr3L 7800772 7800836 297 30 7102 11.0 11.0 11.0 2.5 7166 chr3L 7793670 intron CG32369 - chr3L 7797253 intron CG32369 - chr3L 7800836 intron CG32369 - chr3L_30_7795001 chr3L_7795001 RAL-850 1757 chr3L 7868567 7868579 chr3L 7868696 7868708 4 129 0.0 0.5 0.2 3.3 141 chr3L 7868567 intergenic CG32365 + chr3L 7868638 intergenic CG32365 + chr3L 7868708 intergenic CG32365 + chr3L_4_7865001 chr3L_7865001 RAL-850 1758 chr3L 7876085 7876097 chr3L 7876214 7876226 6 129 3.0 0.5 1.8 2.1 141 chr3L 7876085 intron CG32365 + chr3L 7876156 intron CG32365 + chr3L 7876226 intron CG32365 + chr3L_6_7875001 chr3L_7875001 RAL-850 1759 chr3L 7886457 7886527 chr3L 7889029 7889095 Stalker4 16 2569 2.0 6.0 4.0 3.2 2638 chr3L 7886457 intron CG32365 + chr3L 7887776 intron CG32365 + chr3L 7889095 intron CG32365 + chr3L_16_7885001 chr3L_7885001 RAL-850 1760 chr3L 7916785 7916853 chr3L 7926006 7926074 roo 19 9221 8.5 10.5 9.5 1.8 9289 chr3L 7916785 3` UTR syd - chr3L 7921430 intron syd - chr3L 7926074 3` UTR syd - chr3L_19_7920001 chr3L_7920001 RAL-850 1761 chr3L 7956447 7956474 chr3L 7956575 7956602 16 128 3.5 11.0 7.2 2.0 155 chr3L 7956447 intergenic not near genes chr3L 7956524 intergenic not near genes chr3L 7956602 intergenic not near genes chr3L_16_7955001 chr3L_7955001 RAL-850 1762 chr3L 7985332 7985387 chr3L 7987700 7987765 NOF 19 2377 8.5 8.0 8.2 2.1 2433 chr3L 7985332 intron nmo + chr3L 7986548 intron nmo + chr3L 7987765 intron nmo + chr3L_19_7985001 chr3L_7985001 RAL-850 1763 chr3L 7995341 7995363 chr3L 7995555 7995577 7 214 0.0 15.0 7.5 0.8 236 chr3L 7995341 intron nmo + chr3L 7995459 intron nmo + chr3L 7995577 intron nmo + chr3L_7_7995001 chr3L_7995001 RAL-850 1764 chr3L 7997573 7997624 chr3L 7997704 7997755 7 131 5.0 8.0 6.5 0.9 182 chr3L 7997573 intron nmo + chr3L 7997664 intron nmo + chr3L 7997755 intron nmo + chr3L_7_7995001 chr3L_7995001 RAL-850 1765 chr3L 8062797 8062845 chr3L 8062925 8062973 11 128 9.5 9.0 9.2 1.1 176 chr3L 8062797 intergenic not near genes chr3L 8062885 intergenic not near genes chr3L 8062973 intergenic not near genes chr3L_11_8060001 chr3L_8060001 RAL-850 1766 chr3L 8076642 8076710 chr3L 8076775 8076827 40 132 14.0 11.5 12.8 2.9 185 chr3L 8076642 intron Ect4 + chr3L 8076734 intron Ect4 + chr3L 8076827 intron Ect4 + chr3L_40_8075001 chr3L_8075001 RAL-850 1767 chr3L 8165925 8165986 chr3L 8166059 8166120 12 130 6.5 3.0 4.8 2.1 195 chr3L 8165925 intergenic CG13675 - chr3L 8166022 intergenic not near genes chr3L 8166120 intergenic not near genes chr3L_12_8165001 chr3L_8165001 RAL-850 1768 chr3L 8203095 8203116 chr3L 8203193 8203194 4 96 7.5 10.5 9.0 0.4 99 chr3L 8203095 exon CG13679 + chr3L 8203144 exon CG13679 + chr3L 8203194 exon CG13679 + chr3L_4_8200001 chr3L_8200001 RAL-850 1769 chr3L 8214685 8214759 chr3L 8214821 8214889 36 133 5.0 7.0 6.0 5.1 204 chr3L 8214685 intergenic not near genes chr3L 8214787 intergenic CG8012 + chr3L 8214889 intergenic CG8012 + chr3L_36_8210001 chr3L_8210001 RAL-850 1770 chr3L 8226737 8226745 chr3L 8226879 8226887 4 142 1.0 0.0 0.5 2.7 150 chr3L 8226737 intergenic not near genes chr3L 8226812 intergenic not near genes chr3L 8226887 intergenic not near genes chr3L_4_8225001 chr3L_8225001 RAL-850 1771 chr3L 8233543 8233583 chr3L 8238853 8238895 Rt1a 26 5310 7.5 14.5 11.0 2.2 5352 chr3L 8233543 intron CG7213 - chr3L 8236219 intron CG7213 - chr3L 8238895 intron,intron CG7213 -,Dscam4 + chr3L_26_8235001 chr3L_8235001 RAL-850 1772 chr3L 8274789 8274798 chr3L 8274953 8274962 5 164 18.0 0.0 9.0 0.5 173 chr3L 8274789 intron Dscam4 + chr3L 8274876 intron Dscam4 + chr3L 8274962 intron Dscam4 + chr3L_5_8270001 chr3L_8270001 RAL-850 1773 chr3L 8295748 8295819 chr3L 8295956 8296027 32 207 7.0 11.0 9.0 3.2 279 chr3L 8295748 intergenic CG7201 - chr3L 8295888 intergenic not near genes chr3L 8296027 intergenic not near genes chr3L_32_8295001 chr3L_8295001 RAL-850 1774 chr3L 8371731 8371752 chr3L 8371867 8371888 7 136 0.0 20.0 10.0 0.6 157 chr3L 8371731 intergenic not near genes chr3L 8371810 intergenic not near genes chr3L 8371888 intergenic not near genes chr3L_7_8370001 chr3L_8370001 RAL-850 1775 chr3L 8443518 8443583 chr3L 8443649 8443715 18 132 9.0 7.5 8.2 2.0 197 chr3L 8443518 3` UTR CG6983 - chr3L 8443616 3` UTR CG6983 - chr3L 8443715 3` UTR CG6983 - chr3L_18_8440001 chr3L_8440001 RAL-850 1776 chr3L 8481739 8481798 chr3L 8490933 8491007 roo 19 9190 15.5 6.5 11.0 1.6 9268 chr3L 8481739 intron CG43163 - chr3L 8486373 intron CG43163 - chr3L 8491007 intron CG43163 - chr3L_19_8485001 chr3L_8485001 RAL-850 1777 chr3L 8498258 8498321 chr3L 8505775 8505838 blood 27 7517 6.0 7.0 6.5 3.6 7580 chr3L 8498258 intron CG43163 - chr3L 8502048 intron CG43163 - chr3L 8505838 intron CG43163 - chr3L_27_8500001 chr3L_8500001 RAL-850 1778 chr3L 8721156 8721214 chr3L 8721304 8721354 67 148 23.5 0.5 12.0 5.2 198 chr3L 8721156 5` UTR CG32022 - chr3L 8721255 5` UTR CG32022 - chr3L 8721354 5` UTR CG6511 + chr3L_67_8720001 chr3L_8720001 RAL-850 1779 chr3L 8791231 8791304 chr3L 8796701 8796773 I-element 21 5467 10.5 0.0 5.2 3.4 5542 chr3L 8791231 exon Fhos + chr3L 8794002 intron Fhos + chr3L 8796773 intron Fhos + chr3L_21_8790001 chr3L_8790001 RAL-850 1780 chr3L 8826729 8826804 chr3L 8826897 8826970 33 165 7.5 5.5 6.5 4.4 241 chr3L 8826729 intergenic not near genes chr3L 8826850 intergenic not near genes chr3L 8826970 intergenic not near genes chr3L_33_8825001 chr3L_8825001 RAL-850 1781 chr3L 8839720 8839755 chr3L 8839859 8839894 15 138 9.5 8.0 8.8 1.5 174 chr3L 8839720 intron dally + chr3L 8839807 intron dally + chr3L 8839894 intron dally + chr3L_15_8835001 chr3L_8835001 RAL-850 1782 chr3L 8849374 8849393 chr3L 8849511 8849530 12 137 9.0 12.0 10.5 1.0 156 chr3L 8849374 intron dally + chr3L 8849452 intron dally + chr3L 8849530 intron dally + chr3L_12_8845001 chr3L_8845001 RAL-850 1783 chr3L 8925408 8925427 chr3L 8925550 8925569 8 142 11.5 0.0 5.8 1.2 161 chr3L 8925408 intron Tsp66E + chr3L 8925488 intron Tsp66E + chr3L 8925569 intron Tsp66E + chr3L_8_8925001 chr3L_8925001 RAL-850 1784 chr3L 8950508 8950574 chr3L 8950652 8950718 10 142 8.5 13.5 11.0 0.8 210 chr3L 8950508 intron,intron CG43783 -,orb2 - chr3L 8950613 intron,intron CG43783 -,orb2 - chr3L 8950718 intron,intron CG43783 -,orb2 - chr3L_10_8950001 chr3L_8950001 RAL-850 1785 chr3L 9024456 9024528 chr3L 9024586 9024658 25 130 5.5 7.5 6.5 3.3 202 chr3L 9024456 intergenic not near genes chr3L 9024557 intergenic not near genes chr3L 9024658 intergenic not near genes chr3L_25_9020001 chr3L_9020001 RAL-850 1786 chr3L 9036258 9036286 chr3L 9036379 9036407 14 131 14.5 17.0 15.8 0.8 149 chr3L 9036258 intergenic not near genes chr3L 9036332 intergenic not near genes chr3L 9036407 intergenic not near genes chr3L_14_9035001 chr3L_9035001 RAL-850 1787 chr3L 9047049 9047111 chr3L 9047186 9047248 10 137 0.0 5.5 2.8 2.6 199 chr3L 9047049 intergenic CG5144 + chr3L 9047148 intergenic CG5144 + chr3L 9047248 intergenic CG5144 + chr3L_10_9045001 chr3L_9045001 RAL-850 1788 chr3L 9076889 9076945 chr3L 9084499 9084555 412 26 7607 12.5 10.5 11.5 2.1 7666 chr3L 9076889 exon Tequila + chr3L 9080722 intron Tequila + chr3L 9084555 exon Tequila + chr3L_26_9080001 chr3L_9080001 RAL-850 1789 chr3L 9086742 9086751 chr3L 9086875 9086884 4 133 26.5 29.0 27.8 0.1 142 chr3L 9086742 exon Tequila + chr3L 9086813 exon Tequila + chr3L 9086884 exon Tequila + chr3L_4_9085001 chr3L_9085001 RAL-850 1790 chr3L 9130510 9130533 chr3L 9134321 9134344 412 8 3811 19.5 8.5 14.0 0.5 3834 chr3L 9130510 intergenic bol - chr3L 9132427 intergenic not near genes chr3L 9134344 intergenic Dhpr + chr3L_8_9130001 chr3L_9130001 RAL-850 1791 chr3L 9130548 9130577 chr3L 9134320 9134388 412 13 3802 9.5 8.5 9.0 1.3 3840 chr3L 9130548 intergenic bol - chr3L 9132468 intergenic not near genes chr3L 9134388 intergenic Dhpr + chr3L_13_9130001 chr3L_9130001 RAL-850 1792 chr3L 9143334 9143388 chr3L 9143503 9143549 5 167 0.5 2.0 1.2 2.3 215 chr3L 9143334 intron nwk + chr3L 9143442 intron nwk + chr3L 9143549 exon nwk + chr3L_5_9140001 chr3L_9140001 RAL-850 1793 chr3L 9164656 9164677 chr3L 9166173 9166194 hobo 9 1517 14.0 0.5 7.2 1.1 1538 chr3L 9164656 intron Rdl - chr3L 9165425 intron Rdl - chr3L 9166194 intron Rdl - chr3L_9_9165001 chr3L_9165001 RAL-850 1794 chr3L 9219216 9219221 chr3L 9219924 9219943 jockey 4 718 20.0 14.0 17.0 0.2 727 chr3L 9219216 intergenic not near genes chr3L 9219580 intergenic not near genes chr3L 9219943 intergenic not near genes chr3L_4_9215001 chr3L_9215001 RAL-850 1795 chr3L 9219222 9219225 chr3L 9219923 9219947 jockey 7 715 20.0 13.0 16.5 0.4 725 chr3L 9219222 intergenic not near genes chr3L 9219584 intergenic not near genes chr3L 9219947 intergenic not near genes chr3L_7_9215001 chr3L_9215001 RAL-850 1796 chr3L 9219234 9219246 chr3L 9219932 9219968 jockey 9 712 14.5 15.5 15.0 0.6 734 chr3L 9219234 intergenic not near genes chr3L 9219601 intergenic not near genes chr3L 9219968 intergenic not near genes chr3L_9_9215001 chr3L_9215001 RAL-850 1797 chr3L 9219249 9219274 chr3L 9219929 9219942 jockey 10 700 7.0 15.5 11.2 0.8 693 chr3L 9219249 intergenic not near genes chr3L 9219596 intergenic not near genes chr3L 9219942 intergenic not near genes chr3L_10_9215001 chr3L_9215001 RAL-850 1798 chr3L 9270578 9270648 chr3L 9278382 9278402 roo 20 7795 5.5 14.0 9.8 1.9 7824 chr3L 9270578 intron GluRIB + chr3L 9274490 intron GluRIB + chr3L 9278402 exon GluRIB + chr3L_20_9270001 chr3L_9270001 RAL-850 1799 chr3L 9279867 9279924 chr3L 9279987 9280029 14 126 7.5 5.5 6.5 1.9 162 chr3L 9279867 intron GluRIB + chr3L 9279948 intron GluRIB + chr3L 9280029 intron GluRIB + chr3L_14_9275001 chr3L_9275001 RAL-850 1800 chr3L 9307796 9307796 chr3L 22908066 22908066 8 13600270 27.5 37.5 32.5 0.2 13600270 chr3L 9307796 intergenic not near genes chr3L 16107931 intron Zn72D - chr3L 22908066 intergenic not near genes chr3L_8_16105001 chr3L_16105001 RAL-850 1801 chr3L 9323499 9323502 chr3L 9323632 9323635 5 133 16.0 0.5 8.2 0.5 136 chr3L 9323499 intergenic not near genes chr3L 9323567 intergenic not near genes chr3L 9323635 intergenic not near genes chr3L_5_9320001 chr3L_9320001 RAL-850 1802 chr3L 9403598 9403660 chr3L 9403743 9403792 37 139 13.0 11.5 12.2 2.8 194 chr3L 9403598 intergenic not near genes chr3L 9403695 intergenic not near genes chr3L 9403792 intergenic not near genes chr3L_37_9400001 chr3L_9400001 RAL-850 1803 chr3L 9443490 9443521 chr3L 9445327 9445358 S-element 16 1837 5.5 11.0 8.2 1.7 1868 chr3L 9443490 intron CG33926 + chr3L 9444424 intron CG33926 + chr3L 9445358 intron CG33926 + chr3L_16_9440001 chr3L_9440001 RAL-850 1804 chr3L 9443525 9443535 chr3L 9445298 9445363 S-element 4 1819 4.0 7.0 5.5 0.6 1838 chr3L 9443525 intron CG33926 + chr3L 9444444 intron CG33926 + chr3L 9445363 intron CG33926 + chr3L_4_9440001 chr3L_9440001 RAL-850 1805 chr3L 9501685 9501734 chr3L 9502218 9502267 roo 18 533 3.0 7.0 5.0 3.0 582 chr3L 9501685 intron path - chr3L 9501976 intron path - chr3L 9502267 intron path - chr3L_18_9500001 chr3L_9500001 RAL-850 1806 chr3L 9502558 9502626 chr3L 9502693 9502761 27 134 5.5 4.5 5.0 4.5 203 chr3L 9502558 intron path - chr3L 9502660 intron path - chr3L 9502761 intron path - chr3L_27_9500001 chr3L_9500001 RAL-850 1807 chr3L 9503420 9503463 chr3L 9503559 9503587 10 136 7.5 15.5 11.5 0.8 167 chr3L 9503420 intron path - chr3L 9503504 intron path - chr3L 9503587 intron path - chr3L_10_9500001 chr3L_9500001 RAL-850 1808 chr3L 9510860 9510953 chr3L 9511003 9511082 24 136 1.0 6.0 3.5 5.3 222 chr3L 9510860 intron RpS9 - chr3L 9510971 intron RpS9 - chr3L 9511082 exon RpS9 - chr3L_24_9510001 chr3L_9510001 RAL-850 1809 chr3L 9533733 9533776 chr3L 9541319 9541355 412 13 7593 9.0 14.0 11.5 1.0 7622 chr3L 9533733 intergenic not near genes chr3L 9537544 intergenic not near genes chr3L 9541355 intergenic not near genes chr3L_13_9535001 chr3L_9535001 RAL-850 1810 chr3L 9571869 9571932 chr3L 9572267 9572330 jockey 20 398 9.5 0.0 4.8 3.4 461 chr3L 9571869 intron CG42673 + chr3L 9572100 intron CG42673 + chr3L 9572330 intron CG42673 + chr3L_20_9570001 chr3L_9570001 RAL-850 1811 chr3L 9572249 9572332 chr3L 9572378 9572461 31 129 1.0 4.0 2.5 8.9 212 chr3L 9572249 intron CG42673 + chr3L 9572355 intron CG42673 + chr3L 9572461 intron CG42673 + chr3L_31_9570001 chr3L_9570001 RAL-850 1812 chr3L 9575868 9575928 chr3L 9580996 9581046 jockey 18 5127 8.0 8.0 8.0 2.0 5178 chr3L 9575868 intron CG42673 + chr3L 9578457 intron CG42673 + chr3L 9581046 intron CG42673 + chr3L_18_9575001 chr3L_9575001 RAL-850 1813 chr3L 9604205 9604247 chr3L 9604349 9604391 13 144 0.0 6.0 3.0 3.2 186 chr3L 9604205 intron CG3280 + chr3L 9604298 intron CG3280 + chr3L 9604391 intron CG3280 + chr3L_13_9600001 chr3L_9600001 RAL-850 1814 chr3L 9637810 9637875 chr3L 9637942 9638007 33 131 6.5 6.0 6.2 4.6 197 chr3L 9637810 exon fry - chr3L 9637908 intron fry - chr3L 9638007 intron fry - chr3L_33_9635001 chr3L_9635001 RAL-850 1815 chr3L 9638974 9639048 chr3L 9639113 9639178 13 136 0.0 9.5 4.8 2.2 204 chr3L 9638974 intron,3` UTR fry -,CG8329 + chr3L 9639076 intron fry - chr3L 9639178 intron fry - chr3L_13_9635001 chr3L_9635001 RAL-850 1816 chr3L 9736454 9736504 chr3L 9736580 9736633 13 126 6.5 3.0 4.8 2.2 179 chr3L 9736454 intron CG42268 - chr3L 9736544 intron CG42268 - chr3L 9736633 intron CG42268 - chr3L_13_9735001 chr3L_9735001 RAL-850 1817 chr3L 9775316 9775394 chr3L 9775725 9775804 24 408 2.0 7.5 4.8 4.1 488 chr3L 9775316 intron CG8177 + chr3L 9775560 intron CG8177 + chr3L 9775804 intron CG8177 + chr3L_24_9775001 chr3L_9775001 RAL-850 1818 chr3L 9795277 9795344 chr3L 9795414 9795481 17 137 4.0 5.5 4.8 2.9 204 chr3L 9795277 intron Zasp67 - chr3L 9795379 intron Zasp67 - chr3L 9795481 intron Zasp67 - chr3L_17_9795001 chr3L_9795001 RAL-850 1819 chr3L 9846361 9846369 chr3L 9846833 9846841 5 472 11.0 10.0 10.5 0.4 480 chr3L 9846361 intron RasGAP1 - chr3L 9846601 intron RasGAP1 - chr3L 9846841 intron RasGAP1 - chr3L_5_9845001 chr3L_9845001 RAL-850 1820 chr3L 9846374 9846386 chr3L 9846831 9846858 9 470 7.5 9.5 8.5 0.9 484 chr3L 9846374 intron RasGAP1 - chr3L 9846616 intron RasGAP1 - chr3L 9846858 intron RasGAP1 - chr3L_9_9845001 chr3L_9845001 RAL-850 1821 chr3L 9848483 9848544 chr3L 9848602 9848632 7 105 7.0 0.0 3.5 1.6 149 chr3L 9848483 intron RasGAP1 - chr3L 9848558 intron RasGAP1 - chr3L 9848632 intron RasGAP1 - chr3L_7_9845001 chr3L_9845001 RAL-850 1822 chr3L 9907829 9907842 chr3L 9907956 9907964 8 126 18.5 8.0 13.2 0.6 135 chr3L 9907829 intergenic CG34356 + chr3L 9907896 intergenic CG34356 + chr3L 9907964 intergenic CG34356 + chr3L_8_9905001 chr3L_9905001 RAL-850 1823 chr3L 9907843 9907893 chr3L 9907954 9908015 18 120 6.5 9.0 7.8 2.0 172 chr3L 9907843 intergenic CG34356 + chr3L 9907929 intergenic CG34356 + chr3L 9908015 intergenic CG34356 + chr3L_18_9905001 chr3L_9905001 RAL-850 1824 chr3L 9918839 9918909 chr3L 9918977 9919054 29 144 7.0 10.0 8.5 3.1 215 chr3L 9918839 intron CG34356 + chr3L 9918946 intron CG34356 + chr3L 9919054 intron CG34356 + chr3L_29_9915001 chr3L_9915001 RAL-850 1825 chr3L 9929624 9929690 chr3L 9938455 9938515 roo 27 8829 8.5 9.0 8.8 2.8 8891 chr3L 9929624 intron CG34356 + chr3L 9934070 intron CG34356 + chr3L 9938515 intron CG34356 + chr3L_27_9930001 chr3L_9930001 RAL-850 1826 chr3L 9951153 9951219 chr3L 9951290 9951356 32 136 5.5 7.5 6.5 4.3 203 chr3L 9951153 intron CG34356 + chr3L 9951254 intron CG34356 + chr3L 9951356 intron CG34356 + chr3L_32_9950001 chr3L_9950001 RAL-850 1827 chr3L 9973952 9973991 chr3L 9974101 9974140 7 149 7.0 0.0 3.5 1.6 188 chr3L 9973952 3` UTR,3` UTR CG42455 +,vnc + chr3L 9974046 intergenic CG42455 +,vnc + chr3L 9974140 intergenic CG42455 +,vnc + chr3L_7_9970001 chr3L_9970001 RAL-850 1828 chr3L 9994055 9994089 chr3L 9994191 9994225 14 136 6.0 9.5 7.8 1.6 170 chr3L 9994055 intron dpr6 + chr3L 9994140 intron dpr6 + chr3L 9994225 intron dpr6 + chr3L_14_9990001 chr3L_9990001 RAL-850 1829 chr3L 9997106 9997112 chr3L 9997347 9997353 4 241 27.0 9.0 18.0 0.2 247 chr3L 9997106 intron dpr6 + chr3L 9997230 intron dpr6 + chr3L 9997353 intron dpr6 + chr3L_4_9995001 chr3L_9995001 RAL-850 1830 chr3L 9997114 9997168 chr3L 9997341 9997409 25 240 11.5 6.5 9.0 2.5 295 chr3L 9997114 intron dpr6 + chr3L 9997262 intron dpr6 + chr3L 9997409 intron dpr6 + chr3L_25_9995001 chr3L_9995001 RAL-850 1831 chr3L 10003100 10003177 chr3L 10003247 10003324 29 146 6.0 10.0 8.0 3.2 224 chr3L 10003100 intron dpr6 + chr3L 10003212 intron dpr6 + chr3L 10003324 intron dpr6 + chr3L_29_10000001 chr3L_10000001 RAL-850 1832 chr3L 10011545 10011614 chr3L 10011677 10011746 28 130 6.5 7.0 6.8 3.6 201 chr3L 10011545 intron dpr6 + chr3L 10011646 intron dpr6 + chr3L 10011746 intron dpr6 + chr3L_28_10010001 chr3L_10010001 RAL-850 1833 chr3L 10019414 10019431 chr3L 10019549 10019575 4 142 13.5 12.0 12.8 0.3 161 chr3L 10019414 intron dpr6 + chr3L 10019494 intron dpr6 + chr3L 10019575 intron dpr6 + chr3L_4_10015001 chr3L_10015001 RAL-850 1834 chr3L 10032500 10032562 chr3L 10032636 10032699 5 136 0.0 8.5 4.2 1.0 199 chr3L 10032500 intron dpr6 + chr3L 10032600 intron dpr6 + chr3L 10032699 intron dpr6 + chr3L_5_10030001 chr3L_10030001 RAL-850 1835 chr3L 10040961 10041033 chr3L 10041088 10041160 29 124 15.5 8.0 11.8 2.3 199 chr3L 10040961 exon dpr6 + chr3L 10041060 intron dpr6 + chr3L 10041160 intron dpr6 + chr3L_29_10040001 chr3L_10040001 RAL-850 1836 chr3L 10060083 10060114 chr3L 10067695 10067743 17.6 15 7626 16.5 7.5 12.0 1.2 7660 chr3L 10060083 intron dpr6 + chr3L 10063913 intron dpr6 + chr3L 10067743 intron dpr6 + chr3L_15_10060001 chr3L_10060001 RAL-850 1837 chr3L 10085926 10086003 chr3L 10086063 10086095 18 128 2.5 5.0 3.8 3.8 169 chr3L 10085926 intron dpr6 + chr3L 10086010 intron dpr6 + chr3L 10086095 intron dpr6 + chr3L_18_10085001 chr3L_10085001 RAL-850 1838 chr3L 10095501 10095560 chr3L 10095747 10095806 19 246 7.5 8.5 8.0 2.1 305 chr3L 10095501 intron dpr6 + chr3L 10095654 intron dpr6 + chr3L 10095806 intron,3` UTR dpr6 +,CG42825 - chr3L_19_10095001 chr3L_10095001 RAL-850 1839 chr3L 10145005 10145082 chr3L 10145224 10145301 23 218 8.0 5.0 6.5 3.1 296 chr3L 10145005 intergenic not near genes chr3L 10145153 intergenic not near genes chr3L 10145301 intergenic not near genes chr3L_23_10145001 chr3L_10145001 RAL-850 1840 chr3L 10186625 10186634 chr3L 10186768 10186777 4 143 11.5 0.0 5.8 0.6 152 chr3L 10186625 intergenic not near genes chr3L 10186701 intergenic not near genes chr3L 10186777 intergenic not near genes chr3L_4_10185001 chr3L_10185001 RAL-850 1841 chr3L 10189466 10189473 chr3L 10189701 10189708 7 234 22.0 8.0 15.0 0.4 242 chr3L 10189466 intergenic not near genes chr3L 10189587 intergenic not near genes chr3L 10189708 intergenic not near genes chr3L_7_10185001 chr3L_10185001 RAL-850 1842 chr3L 10189474 10189489 chr3L 10189696 10189717 7 231 17.0 6.5 11.8 0.5 243 chr3L 10189474 intergenic not near genes chr3L 10189596 intergenic not near genes chr3L 10189717 intergenic not near genes chr3L_7_10185001 chr3L_10185001 RAL-850 1843 chr3L 10191247 10191310 chr3L 10191398 10191471 31 160 8.5 11.5 10.0 2.8 224 chr3L 10191247 exon ect - chr3L 10191359 intron ect - chr3L 10191471 intron ect - chr3L_31_10190001 chr3L_10190001 RAL-850 1844 chr3L 10219193 10219266 chr3L 10219340 10219377 39 145 9.0 11.0 10.0 3.5 184 chr3L 10219193 exon CG32055 - chr3L 10219285 exon CG32055 - chr3L 10219377 exon CG32055 - chr3L_39_10215001 chr3L_10215001 RAL-850 1845 chr3L 10246049 10246067 chr3L 10246202 10246220 6 153 0.0 10.5 5.2 1.0 171 chr3L 10246049 intergenic not near genes chr3L 10246134 intergenic not near genes chr3L 10246220 intergenic not near genes chr3L_6_10245001 chr3L_10245001 RAL-850 1846 chr3L 10298635 10298697 chr3L 10298767 10298818 15 136 0.0 7.0 3.5 3.3 183 chr3L 10298635 intergenic not near genes chr3L 10298726 intergenic not near genes chr3L 10298818 intergenic not near genes chr3L_15_10295001 chr3L_10295001 RAL-850 1847 chr3L 10300002 10300069 chr3L 10300144 10300211 23 140 1.5 7.0 4.2 4.4 209 chr3L 10300002 intergenic not near genes chr3L 10300106 intergenic not near genes chr3L 10300211 intergenic not near genes chr3L_23_10300001 chr3L_10300001 RAL-850 1848 chr3L 10308701 10308753 chr3L 10308828 10308880 10 126 0.5 10.0 5.2 1.6 179 chr3L 10308701 intergenic not near genes chr3L 10308790 intergenic not near genes chr3L 10308880 intergenic not near genes chr3L_10_10305001 chr3L_10305001 RAL-850 1849 chr3L 10310304 10310379 chr3L 10310451 10310526 29 147 11.5 8.0 9.8 2.7 222 chr3L 10310304 intergenic not near genes chr3L 10310415 intergenic not near genes chr3L 10310526 intergenic not near genes chr3L_29_10310001 chr3L_10310001 RAL-850 1850 chr3L 10314434 10314504 chr3L 10314564 10314634 20 130 9.5 5.0 7.2 2.4 200 chr3L 10314434 intergenic not near genes chr3L 10314534 intergenic not near genes chr3L 10314634 intergenic not near genes chr3L_20_10310001 chr3L_10310001 RAL-850 1851 chr3L 10328065 10328129 chr3L 10328227 10328291 24 162 7.0 7.0 7.0 3.0 226 chr3L 10328065 intergenic not near genes chr3L 10328178 intergenic not near genes chr3L 10328291 intergenic not near genes chr3L_24_10325001 chr3L_10325001 RAL-850 1852 chr3L 10348610 10348672 chr3L 10348770 10348807 22 162 10.0 0.0 5.0 3.7 197 chr3L 10348610 intron CR44327 + chr3L 10348708 intron CR44327 + chr3L 10348807 intron CR44327 + chr3L_22_10345001 chr3L_10345001 RAL-850 1853 chr3L 10357738 10357813 chr3L 10357870 10357948 33 132 8.0 11.0 9.5 3.1 210 chr3L 10357738 intron CR44327 + chr3L 10357843 intron CR44327 + chr3L 10357948 intron CR44327 + chr3L_33_10355001 chr3L_10355001 RAL-850 1854 chr3L 10414900 10414959 chr3L 10417309 10417381 Doc 22 2419 8.0 9.0 8.5 2.3 2481 chr3L 10414900 intergenic CG12362 + chr3L 10416140 intergenic not near genes chr3L 10417381 intergenic not near genes chr3L_22_10415001 chr3L_10415001 RAL-850 1855 chr3L 10417531 10417553 chr3L 10417658 10417680 7 127 20.0 16.0 18.0 0.4 149 chr3L 10417531 intergenic not near genes chr3L 10417606 intergenic not near genes chr3L 10417680 intergenic not near genes chr3L_7_10415001 chr3L_10415001 RAL-850 1856 chr3L 10417556 10417599 chr3L 10417655 10417691 16 117 10.5 15.5 13.0 1.1 135 chr3L 10417556 intergenic not near genes chr3L 10417624 intergenic not near genes chr3L 10417691 intergenic not near genes chr3L_16_10415001 chr3L_10415001 RAL-850 1857 chr3L 10450631 10450709 chr3L 10450778 10450839 17 134 1.0 7.0 4.0 3.4 208 chr3L 10450631 intergenic not near genes chr3L 10450735 intergenic not near genes chr3L 10450839 intergenic not near genes chr3L_17_10450001 chr3L_10450001 RAL-850 1858 chr3L 10470211 10470236 chr3L 10470336 10470373 8 134 20.0 11.0 15.5 0.5 162 chr3L 10470211 intergenic not near genes chr3L 10470292 intergenic not near genes chr3L 10470373 intergenic not near genes chr3L_8_10470001 chr3L_10470001 RAL-850 1859 chr3L 10470237 10470249 chr3L 10470363 10470379 4 124 13.0 18.5 15.8 0.2 142 chr3L 10470237 intergenic not near genes chr3L 10470308 intergenic not near genes chr3L 10470379 intergenic not near genes chr3L_4_10470001 chr3L_10470001 RAL-850 1860 chr3L 10470251 10470270 chr3L 10470334 10470407 13 131 9.5 10.0 9.8 1.2 156 chr3L 10470251 intergenic not near genes chr3L 10470329 intergenic not near genes chr3L 10470407 intergenic not near genes chr3L_13_10470001 chr3L_10470001 RAL-850 1861 chr3L 10476534 10476606 chr3L 10476671 10476718 31 136 11.5 5.0 8.2 3.4 184 chr3L 10476534 intergenic not near genes chr3L 10476626 intergenic not near genes chr3L 10476718 intergenic not near genes chr3L_31_10475001 chr3L_10475001 RAL-850 1862 chr3L 10479419 10479490 chr3L 10479551 10479625 8 132 0.0 8.0 4.0 1.6 206 chr3L 10479419 intergenic not near genes chr3L 10479522 intergenic not near genes chr3L 10479625 intergenic not near genes chr3L_8_10475001 chr3L_10475001 RAL-850 1863 chr3L 10501999 10502023 chr3L 10502145 10502169 8 146 16.5 5.5 11.0 0.7 170 chr3L 10501999 intron A2bp1 + chr3L 10502084 intron A2bp1 + chr3L 10502169 intron A2bp1 + chr3L_8_10500001 chr3L_10500001 RAL-850 1864 chr3L 10502026 10502043 chr3L 10502142 10502172 8 139 9.5 5.5 7.5 0.9 146 chr3L 10502026 intron A2bp1 + chr3L 10502099 intron A2bp1 + chr3L 10502172 intron A2bp1 + chr3L_8_10500001 chr3L_10500001 RAL-850 1865 chr3L 10504297 10504338 chr3L 10504426 10504462 14 126 14.5 11.5 13.0 1.0 165 chr3L 10504297 intron A2bp1 + chr3L 10504380 intron A2bp1 + chr3L 10504462 intron A2bp1 + chr3L_14_10500001 chr3L_10500001 RAL-850 1866 chr3L 10509444 10509504 chr3L 10509618 10509647 11 175 9.0 0.5 4.8 1.9 203 chr3L 10509444 intron A2bp1 + chr3L 10509546 intron A2bp1 + chr3L 10509647 intron A2bp1 + chr3L_11_10505001 chr3L_10505001 RAL-850 1867 chr3L 10520487 10520562 chr3L 10520618 10520690 24 130 0.5 7.5 4.0 4.8 203 chr3L 10520487 intron A2bp1 + chr3L 10520588 intron A2bp1 + chr3L 10520690 intron A2bp1 + chr3L_24_10520001 chr3L_10520001 RAL-850 1868 chr3L 10589920 10589936 chr3L 10590059 10590075 4 139 4.5 8.0 6.2 0.6 155 chr3L 10589920 intron A2bp1 + chr3L 10589998 intron A2bp1 + chr3L 10590075 intron A2bp1 + chr3L_4_10585001 chr3L_10585001 RAL-850 1869 chr3L 10589945 10589972 chr3L 10590084 10590111 4 139 4.0 10.5 7.2 0.5 166 chr3L 10589945 intron A2bp1 + chr3L 10590028 intron A2bp1 + chr3L 10590111 intron A2bp1 + chr3L_4_10590001 chr3L_10590001 RAL-850 1870 chr3L 10598779 10598798 chr3L 10598906 10598925 7 127 13.0 0.0 6.5 0.9 146 chr3L 10598779 intergenic not near genes chr3L 10598852 intergenic not near genes chr3L 10598925 intergenic not near genes chr3L_7_10595001 chr3L_10595001 RAL-850 1871 chr3L 10610184 10610241 chr3L 10610311 10610368 24 127 6.0 10.5 8.2 2.6 184 chr3L 10610184 intergenic not near genes chr3L 10610276 intergenic not near genes chr3L 10610368 intergenic not near genes chr3L_24_10610001 chr3L_10610001 RAL-850 1872 chr3L 10620192 10620202 chr3L 10620318 10620328 5 126 8.0 1.0 4.5 0.9 136 chr3L 10620192 intergenic not near genes chr3L 10620260 intergenic not near genes chr3L 10620328 intergenic not near genes chr3L_5_10620001 chr3L_10620001 RAL-850 1873 chr3L 10621834 10621878 chr3L 10621971 10622015 13 136 2.5 12.5 7.5 1.5 181 chr3L 10621834 intergenic not near genes chr3L 10621924 intergenic not near genes chr3L 10622015 intergenic not near genes chr3L_13_10620001 chr3L_10620001 RAL-850 1874 chr3L 10628323 10628328 chr3L 10628532 10628537 4 209 22.0 15.0 18.5 0.2 214 chr3L 10628323 intron CG14151 - chr3L 10628430 exon CG14151 - chr3L 10628537 intergenic CG14151 - chr3L_4_10625001 chr3L_10625001 RAL-850 1875 chr3L 10628332 10628383 chr3L 10628528 10628592 17 203 9.0 14.5 11.8 1.3 260 chr3L 10628332 intron CG14151 - chr3L 10628462 5` UTR CG14151 - chr3L 10628592 intergenic CG14151 -,CG42536 - chr3L_17_10625001 chr3L_10625001 RAL-850 1876 chr3L 10653302 10653358 chr3L 10653437 10653493 24 135 5.0 10.5 7.8 2.7 191 chr3L 10653302 intron CG32066 - chr3L 10653398 intron CG32066 - chr3L 10653493 intron CG32066 - chr3L_24_10650001 chr3L_10650001 RAL-850 1877 chr3L 10654090 10654149 chr3L 10654214 10654285 12 130 7.0 7.0 7.0 1.5 195 chr3L 10654090 intron CG32066 - chr3L 10654188 intron CG32066 - chr3L 10654285 intron CG32066 - chr3L_12_10650001 chr3L_10650001 RAL-850 1878 chr3L 10658064 10658208 chr3L 10658191 10658385 35 163 0.0 0.0 0.0 35.0 321 chr3L 10658064 intron CG32066 - chr3L 10658224 intron CG32066 - chr3L 10658385 intron CG32066 - chr3L_35_10655001 chr3L_10655001 RAL-850 1879 chr3L 10674080 10674152 chr3L 10674213 10674289 7 136 13.5 15.0 14.2 0.5 209 chr3L 10674080 intron simj + chr3L 10674184 intron simj + chr3L 10674289 intron simj + chr3L_7_10670001 chr3L_10670001 RAL-850 1880 chr3L 10735770 10735773 chr3L 24766919 24766922 5 14031149 18.0 16.0 17.0 0.3 14031152 chr3L 10735770 intergenic not near genes chr3L 17751346 intergenic Adgf-A - chr3L 24766922 intron scro + chr3L_5_17750001 chr3L_17750001 RAL-850 1881 chr3L 10735794 10735831 chr3L 10735922 10735970 12 137 7.5 10.5 9.0 1.2 176 chr3L 10735794 intergenic not near genes chr3L 10735882 intergenic not near genes chr3L 10735970 intergenic not near genes chr3L_12_10735001 chr3L_10735001 RAL-850 1882 chr3L 10739760 10739772 chr3L 10739894 10739906 5 134 10.5 0.0 5.2 0.8 146 chr3L 10739760 intergenic not near genes chr3L 10739833 intergenic not near genes chr3L 10739906 intergenic not near genes chr3L_5_10735001 chr3L_10735001 RAL-850 1883 chr3L 10842388 10842393 chr3L 10842518 10842523 5 130 7.5 0.0 3.8 1.0 135 chr3L 10842388 intergenic not near genes chr3L 10842456 intergenic not near genes chr3L 10842523 intergenic not near genes chr3L_5_10840001 chr3L_10840001 RAL-850 1884 chr3L 10887367 10887378 chr3L 10887496 10887507 5 129 0.0 14.5 7.2 0.6 140 chr3L 10887367 intergenic not near genes chr3L 10887437 intergenic not near genes chr3L 10887507 intergenic not near genes chr3L_5_10885001 chr3L_10885001 RAL-850 1885 chr3L 10889186 10889259 chr3L 10889316 10889366 34 126 10.0 9.5 9.8 3.1 180 chr3L 10889186 intergenic not near genes chr3L 10889276 intergenic not near genes chr3L 10889366 intergenic not near genes chr3L_34_10885001 chr3L_10885001 RAL-850 1886 chr3L 10914277 10914285 chr3L 10914408 10914416 5 131 16.0 0.0 8.0 0.6 139 chr3L 10914277 intergenic not near genes chr3L 10914346 intergenic not near genes chr3L 10914416 intergenic not near genes chr3L_5_10910001 chr3L_10910001 RAL-850 1887 chr3L 10947470 10947478 chr3L 10947596 10947604 5 126 0.0 2.5 1.2 2.3 134 chr3L 10947470 intergenic not near genes chr3L 10947537 intergenic not near genes chr3L 10947604 intergenic not near genes chr3L_5_10945001 chr3L_10945001 RAL-850 1888 chr3L 10956400 10956468 chr3L 10956568 10956636 26 166 5.5 8.0 6.8 3.3 236 chr3L 10956400 intergenic not near genes chr3L 10956518 intergenic not near genes chr3L 10956636 intergenic not near genes chr3L_26_10955001 chr3L_10955001 RAL-850 1889 chr3L 10956962 10957027 chr3L 10957088 10957152 32 124 8.5 7.0 7.8 3.6 190 chr3L 10956962 intergenic not near genes chr3L 10957057 intergenic not near genes chr3L 10957152 intergenic not near genes chr3L_32_10955001 chr3L_10955001 RAL-850 1890 chr3L 10958157 10958218 chr3L 10958289 10958350 13 132 6.5 0.0 3.2 3.1 193 chr3L 10958157 intergenic not near genes chr3L 10958254 intergenic not near genes chr3L 10958350 intergenic not near genes chr3L_13_10955001 chr3L_10955001 RAL-850 1891 chr3L 11053617 11053680 chr3L 11053752 11053809 15 134 0.0 9.0 4.5 2.7 192 chr3L 11053617 intergenic CG7888 + chr3L 11053713 intergenic CG7888 + chr3L 11053809 intergenic CG7888 + chr3L_15_11050001 chr3L_11050001 RAL-850 1892 chr3L 11087012 11087087 chr3L 11088850 11088923 S-element 25 1834 4.0 8.5 6.2 3.5 1911 chr3L 11087012 intron JIL-1 - chr3L 11087968 intron JIL-1 - chr3L 11088923 intron JIL-1 - chr3L_25_11085001 chr3L_11085001 RAL-850 1893 chr3L 11104027 11104105 chr3L 11104156 11104236 6 130 8.0 1.0 4.5 1.1 209 chr3L 11104027 intergenic CG32071 - chr3L 11104132 intergenic CG32071 - chr3L 11104236 intergenic CG32071 - chr3L_6_11100001 chr3L_11100001 RAL-850 1894 chr3L 11105249 11105324 chr3L 11107010 11107085 X-element 30 1760 5.0 6.0 5.5 4.6 1836 chr3L 11105249 intergenic not near genes chr3L 11106167 intergenic not near genes chr3L 11107085 exon CG32073 - chr3L_30_11105001 chr3L_11105001 RAL-850 1895 chr3L 11135478 11135528 chr3L 11135758 11135808 16 280 5.0 0.0 2.5 4.6 330 chr3L 11135478 3` UTR CG14143 + chr3L 11135643 intergenic CG14143 +,CG32082 + chr3L 11135808 intergenic CG32082 +,CG14143 + chr3L_16_11135001 chr3L_11135001 RAL-850 1896 chr3L 11145534 11145540 chr3L 11145673 11145680 5 140 0.0 9.0 4.5 0.9 146 chr3L 11145534 intron CG32082 + chr3L 11145607 intron CG32082 + chr3L 11145680 intron CG32082 + chr3L_5_11145001 chr3L_11145001 RAL-850 1897 chr3L 11145542 11145557 chr3L 11145670 11145697 5 138 0.0 9.0 4.5 0.9 155 chr3L 11145542 intron CG32082 + chr3L 11145620 intron CG32082 + chr3L 11145697 intron CG32082 + chr3L_5_11145001 chr3L_11145001 RAL-850 1898 chr3L 11200918 11200941 chr3L 11201044 11201067 6 123 0.0 9.0 4.5 1.1 149 chr3L 11200918 intron Plod - chr3L 11200992 intron Plod - chr3L 11201067 intron Plod - chr3L_6_11200001 chr3L_11200001 RAL-850 1899 chr3L 11229965 11230022 chr3L 11230112 11230169 24 147 6.0 8.5 7.2 2.9 204 chr3L 11229965 intergenic CG42671 + chr3L 11230067 intergenic CG42671 + chr3L 11230169 intergenic not near genes chr3L_24_11230001 chr3L_11230001 RAL-850 1900 chr3L 11241748 11241788 chr3L 11241880 11241920 16 132 1.5 8.0 4.8 2.8 172 chr3L 11241748 intergenic not near genes chr3L 11241834 intergenic not near genes chr3L 11241920 intergenic not near genes chr3L_16_11240001 chr3L_11240001 RAL-850 1901 chr3L 11256355 11256363 chr3L 11256499 11256507 4 144 10.5 0.0 5.2 0.6 152 chr3L 11256355 intergenic scyl + chr3L 11256431 intergenic scyl + chr3L 11256507 intergenic scyl + chr3L_4_11255001 chr3L_11255001 RAL-850 1902 chr3L 11256366 11256406 chr3L 11256497 11256550 11 137 6.0 0.0 3.0 2.8 184 chr3L 11256366 intergenic scyl + chr3L 11256458 intergenic scyl + chr3L 11256550 intergenic scyl + chr3L_11_11255001 chr3L_11255001 RAL-850 1903 chr3L 11264421 11264485 chr3L 11271423 11271487 17.6 11 7000 8.5 5.0 6.8 1.4 7066 chr3L 11264421 intergenic not near genes chr3L 11267954 intergenic not near genes chr3L 11271487 intergenic not near genes chr3L_11_11265001 chr3L_11265001 RAL-850 1904 chr3L 11277404 11277471 chr3L 11278455 11278516 Rt1a 13 1043 3.0 10.5 6.8 1.7 1112 chr3L 11277404 intergenic not near genes chr3L 11277960 intergenic not near genes chr3L 11278516 intergenic not near genes chr3L_13_11275001 chr3L_11275001 RAL-850 1905 chr3L 11302997 11303055 chr3L 11303133 11303191 10 136 4.5 0.0 2.2 3.1 194 chr3L 11302997 intergenic not near genes chr3L 11303094 intergenic not near genes chr3L 11303191 intergenic not near genes chr3L_10_11300001 chr3L_11300001 RAL-850 1906 chr3L 11304792 11304807 chr3L 11304939 11304954 7 147 12.0 0.0 6.0 1.0 162 chr3L 11304792 intergenic not near genes chr3L 11304873 intergenic not near genes chr3L 11304954 intergenic not near genes chr3L_7_11300001 chr3L_11300001 RAL-850 1907 chr3L 11329655 11329720 chr3L 11332905 11332935 jockey 16 3248 11.5 9.0 10.2 1.4 3280 chr3L 11329655 intergenic not near genes chr3L 11331295 intergenic not near genes chr3L 11332935 intergenic not near genes chr3L_16_11330001 chr3L_11330001 RAL-850 1908 chr3L 11339606 11339657 chr3L 11339733 11339783 22 126 10.0 12.5 11.2 1.8 177 chr3L 11339606 intergenic not near genes chr3L 11339694 intergenic not near genes chr3L 11339783 intergenic not near genes chr3L_22_11335001 chr3L_11335001 RAL-850 1909 chr3L 11383929 11383968 chr3L 11384046 11384052 10 118 14.0 4.0 9.0 1.0 123 chr3L 11383929 intron CR42755 - chr3L 11383990 3` UTR CR42755 - chr3L 11384052 3` UTR CR42755 - chr3L_10_11380001 chr3L_11380001 RAL-850 1910 chr3L 11441355 11441370 chr3L 11441484 11441499 5 129 0.0 10.5 5.2 0.8 144 chr3L 11441355 intergenic not near genes chr3L 11441427 intergenic not near genes chr3L 11441499 intergenic not near genes chr3L_5_11440001 chr3L_11440001 RAL-850 1911 chr3L 11456858 11456905 chr3L 11457006 11457053 28 148 12.5 0.0 6.2 3.9 195 chr3L 11456858 intergenic CG12289 - chr3L 11456956 intergenic CG12289 - chr3L 11457053 intergenic CG12289 - chr3L_28_11455001 chr3L_11455001 RAL-850 1912 chr3L 11474586 11474650 chr3L 11474725 11474789 19 137 6.0 0.0 3.0 4.8 203 chr3L 11474586 intergenic Vha16-2 + chr3L 11474688 intergenic Vha16-2 + chr3L 11474789 intergenic Vha16-2 + chr3L_19_11470001 chr3L_11470001 RAL-850 1913 chr3L 11493141 11493182 chr3L 11493273 11493314 14 132 3.5 6.5 5.0 2.3 173 chr3L 11493141 intron chrb + chr3L 11493228 intron chrb + chr3L 11493314 intron chrb + chr3L_14_11490001 chr3L_11490001 RAL-850 1914 chr3L 11553680 11553731 chr3L 11553832 11553883 23 152 8.5 8.0 8.2 2.5 203 chr3L 11553680 intron Mob2 - chr3L 11553782 intron Mob2 - chr3L 11553883 intron Mob2 - chr3L_23_11550001 chr3L_11550001 RAL-850 1915 chr3L 11572951 11573001 chr3L 11573914 11573964 10 961 8.0 6.5 7.2 1.2 1013 chr3L 11572951 exon CG33490 - chr3L 11573458 exon CG33490 - chr3L 11573964 exon CG33490 - chr3L_10_11570001 chr3L_11570001 RAL-850 1916 chr3L 11579505 11579582 chr3L 11579661 11579738 40 155 7.0 5.0 6.0 5.7 233 chr3L 11579505 intergenic CG43390 - chr3L 11579622 intergenic CG43390 - chr3L 11579738 intergenic CG43390 - chr3L_40_11575001 chr3L_11575001 RAL-850 1917 chr3L 11673930 11673948 chr3L 11674056 11674074 4 126 13.0 0.0 6.5 0.5 144 chr3L 11673930 intron CG32085 - chr3L 11674002 intron CG32085 - chr3L 11674074 intron CG32085 - chr3L_4_11670001 chr3L_11670001 RAL-850 1918 chr3L 11678056 11678115 chr3L 11678188 11678252 24 137 7.0 7.5 7.2 2.9 196 chr3L 11678056 intron CG32085 - chr3L 11678154 intron CG32085 - chr3L 11678252 intron CG32085 - chr3L_24_11675001 chr3L_11675001 RAL-850 1919 chr3L 11723046 11723109 chr3L 11727891 11727954 Doc 28 4845 6.5 16.0 11.2 2.3 4908 chr3L 11723046 3` UTR Bmcp + chr3L 11725500 intron Bmcp + chr3L 11727954 3` UTR Bmcp + chr3L_28_11725001 chr3L_11725001 RAL-850 1920 chr3L 11729633 11729704 chr3L 11729759 11729830 32 125 8.0 13.0 10.5 2.8 197 chr3L 11729633 exon CG32088 + chr3L 11729732 intron CG32088 + chr3L 11729830 exon CG32088 + chr3L_32_11725001 chr3L_11725001 RAL-850 1921 chr3L 11743973 11743986 chr3L 11744131 11744144 8 158 24.0 1.5 12.8 0.6 171 chr3L 11743973 exon CG6024 - chr3L 11744058 intron CG6024 - chr3L 11744144 intron CG6024 - chr3L_8_11740001 chr3L_11740001 RAL-850 1922 chr3L 11743988 11744046 chr3L 11744130 11744204 13 156 8.0 1.5 4.8 2.2 216 chr3L 11743988 exon CG6024 - chr3L 11744096 intron CG6024 - chr3L 11744204 intron CG6024 - chr3L_13_11740001 chr3L_11740001 RAL-850 1923 chr3L 11746620 11746680 chr3L 11746749 11746809 13 129 0.0 8.0 4.0 2.6 189 chr3L 11746620 intron CG6024 - chr3L 11746714 intron CG6024 - chr3L 11746809 intron CG6024 - chr3L_13_11745001 chr3L_11745001 RAL-850 1924 chr3L 7749470 7749471 chr3L 11777678 11777678 5 4028207 30.0 36.5 33.2 0.1 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_5_9760001 chr3L_9760001 RAL-850 1925 chr3L 9313026 9313027 chr3L 11777678 11777678 4 2464652 27.0 36.5 31.8 0.1 2464652 chr3L 9313026 intergenic not near genes chr3L 10545352 intron A2bp1 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_4_10545001 chr3L_10545001 RAL-850 1926 chr3L 11846349 11846361 chr3L 11846519 11846531 5 170 15.0 0.5 7.8 0.6 182 chr3L 11846349 intergenic not near genes chr3L 11846440 intergenic not near genes chr3L 11846531 intergenic not near genes chr3L_5_11845001 chr3L_11845001 RAL-850 1927 chr3L 11847091 11847159 chr3L 11847231 11847299 17 140 8.5 0.0 4.2 3.3 208 chr3L 11847091 intergenic CG12521 - chr3L 11847195 intergenic CG12521 - chr3L 11847299 intergenic CG12521 - chr3L_17_11845001 chr3L_11845001 RAL-850 1928 chr3L 11864503 11864578 chr3L 11865848 11865923 pogo 27 1344 3.0 7.0 5.0 4.5 1420 chr3L 11864503 intron CG44837 - chr3L 11865213 intron CG44837 - chr3L 11865923 intron CG44837 - chr3L_27_11865001 chr3L_11865001 RAL-850 1929 chr3L 11872199 11872224 chr3L 11872346 11872354 9 143 9.5 10.0 9.8 0.8 155 chr3L 11872199 intron CG44837 - chr3L 11872276 intron CG44837 - chr3L 11872354 intron CG44837 - chr3L_9_11870001 chr3L_11870001 RAL-850 1930 chr3L 11872225 11872246 chr3L 11872372 11872393 9 146 8.5 13.0 10.8 0.8 168 chr3L 11872225 intron CG44837 - chr3L 11872309 intron CG44837 - chr3L 11872393 intron CG44837 - chr3L_9_11870001 chr3L_11870001 RAL-850 1931 chr3L 11872248 11872258 chr3L 11872367 11872390 5 135 6.5 13.0 9.8 0.5 142 chr3L 11872248 intron CG44837 - chr3L 11872319 intron CG44837 - chr3L 11872390 intron CG44837 - chr3L_5_11870001 chr3L_11870001 RAL-850 1932 chr3L 11872259 11872269 chr3L 11872365 11872416 4 134 4.0 12.5 8.2 0.4 157 chr3L 11872259 intron CG44837 - chr3L 11872338 intron CG44837 - chr3L 11872416 intron CG44837 - chr3L_4_11870001 chr3L_11870001 RAL-850 1933 chr3L 11887208 11887266 chr3L 11887355 11887413 23 147 10.5 0.5 5.5 3.5 205 chr3L 11887208 intron CG44837 - chr3L 11887310 intron,3` UTR CG44837 -,CG5897 - chr3L 11887413 intron,3` UTR CG44837 -,CG5897 - chr3L_23_11885001 chr3L_11885001 RAL-850 1934 chr3L 11943445 11943521 chr3L 11943596 11943672 27 151 5.5 8.0 6.8 3.5 227 chr3L 11943445 3` UTR Rpt4R + chr3L 11943558 intergenic Rpt4R +,CG5883 - chr3L 11943672 3` UTR CG5883 - chr3L_27_11940001 chr3L_11940001 RAL-850 1935 chr3L 11974288 11974359 chr3L 11974418 11974469 25 129 4.5 0.0 2.2 7.8 181 chr3L 11974288 intergenic CG42397 - chr3L 11974378 intergenic not near genes chr3L 11974469 intergenic CG14125 + chr3L_25_11970001 chr3L_11970001 RAL-850 1936 chr3L 11984526 11984531 chr3L 11984665 11984672 5 141 28.0 3.5 15.8 0.3 146 chr3L 11984526 intergenic CG6938 + chr3L 11984599 intergenic CG6938 + chr3L 11984672 intergenic CG6938 + chr3L_5_11980001 chr3L_11980001 RAL-850 1937 chr3L 11984533 11984593 chr3L 11984659 11984742 12 142 14.5 2.5 8.5 1.3 209 chr3L 11984533 intergenic CG6938 + chr3L 11984638 intergenic CG6938 + chr3L 11984742 intergenic CG6938 + chr3L_12_11980001 chr3L_11980001 RAL-850 1938 chr3L 12013866 12013872 chr3L 12014007 12014013 4 141 24.0 6.5 15.2 0.2 147 chr3L 12013866 intron rols - chr3L 12013940 intron rols - chr3L 12014013 intron rols - chr3L_4_12010001 chr3L_12010001 RAL-850 1939 chr3L 12013873 12013937 chr3L 12014003 12014073 35 139 8.5 6.0 7.2 4.3 200 chr3L 12013873 intron rols - chr3L 12013973 intron rols - chr3L 12014073 intron rols - chr3L_35_12010001 chr3L_12010001 RAL-850 1940 chr3L 12052664 12052734 chr3L 12052803 12052873 26 139 6.0 9.0 7.5 3.1 209 chr3L 12052664 intron rols - chr3L 12052768 intron rols - chr3L 12052873 intron rols - chr3L_26_12050001 chr3L_12050001 RAL-850 1941 chr3L 12075378 12075460 chr3L 12075517 12075594 22 134 5.5 0.0 2.8 5.8 216 chr3L 12075378 intron Sema-5c - chr3L 12075486 intron Sema-5c - chr3L 12075594 intron Sema-5c - chr3L_22_12075001 chr3L_12075001 RAL-850 1942 chr3L 12084456 12084523 chr3L 12084692 12084758 15 235 3.5 4.5 4.0 3.0 302 chr3L 12084456 intergenic not near genes chr3L 12084607 intergenic not near genes chr3L 12084758 intergenic not near genes chr3L_15_12080001 chr3L_12080001 RAL-850 1943 chr3L 12089031 12089109 chr3L 12089161 12089239 45 130 12.0 7.5 9.8 4.2 208 chr3L 12089031 exon CG17154 + chr3L 12089135 3` UTR CG17154 + chr3L 12089239 intergenic CG17154 + chr3L_45_12085001 chr3L_12085001 RAL-850 1944 chr3L 12092346 12092421 chr3L 12092473 12092548 19 127 3.0 6.0 4.5 3.5 202 chr3L 12092346 intergenic not near genes chr3L 12092447 intergenic not near genes chr3L 12092548 intergenic not near genes chr3L_19_12090001 chr3L_12090001 RAL-850 1945 chr3L 12119717 12119786 chr3L 12119864 12119933 19 147 6.5 7.0 6.8 2.4 216 chr3L 12119717 3` UTR ssp + chr3L 12119825 intergenic ssp +,CG11560 + chr3L 12119933 intergenic CG11560 +,ssp + chr3L_19_12115001 chr3L_12115001 RAL-850 1946 chr3L 12157126 12157191 chr3L 12158364 12158429 9 1238 51.0 52.0 51.5 0.2 1303 chr3L 12157126 3` UTR CG9760 - chr3L 12157778 3` UTR CG9760 - chr3L 12158429 intron CG9760 - chr3L_9_12155001 chr3L_12155001 RAL-850 1947 chr3L 12158447 12158519 chr3L 12158717 12158790 16 268 30.0 34.0 32.0 0.5 343 chr3L 12158447 intron CG9760 - chr3L 12158618 intron CG9760 - chr3L 12158790 intron CG9760 - chr3L_16_12155001 chr3L_12155001 RAL-850 1948 chr3L 12158779 12158817 chr3L 12160199 12160272 44 1428 132.0 117.5 124.8 0.3 1493 chr3L 12158779 intron CG9760 - chr3L 12159526 exon CG9760 - chr3L 12160272 intron CG9760 - chr3L_44_12155001 chr3L_12155001 RAL-850 1949 chr3L 12156432 12156515 chr3L 12160281 12160348 27 3839 61.5 87.5 74.5 0.4 3916 chr3L 12156432 3` UTR Nrx-IV + chr3L 12158390 intron CG9760 - chr3L 12160348 intron CG9760 - chr3L_27_12155001 chr3L_12155001 RAL-850 1950 chr3L 12170744 12170813 chr3L 12170876 12170945 18 132 4.5 10.0 7.2 2.2 201 chr3L 12170744 intron Rh7 - chr3L 12170844 intron Rh7 - chr3L 12170945 intron Rh7 - chr3L_18_12170001 chr3L_12170001 RAL-850 1951 chr3L 12220269 12220310 chr3L 12220396 12220443 17 126 7.0 15.5 11.2 1.4 174 chr3L 12220269 5` UTR app - chr3L 12220356 5` UTR app - chr3L 12220443 5` UTR app - chr3L_17_12220001 chr3L_12220001 RAL-850 1952 chr3L 12251620 12251639 chr3L 12251746 12251765 10 126 1.0 11.5 6.2 1.4 145 chr3L 12251620 intron app - chr3L 12251692 intron app - chr3L 12251765 intron app - chr3L_10_12250001 chr3L_12250001 RAL-850 1953 chr3L 12283501 12283535 chr3L 12283631 12283665 16 130 9.0 6.5 7.8 1.8 164 chr3L 12283501 intergenic not near genes chr3L 12283583 intergenic not near genes chr3L 12283665 intergenic not near genes chr3L_16_12280001 chr3L_12280001 RAL-850 1954 chr3L 12304057 12304118 chr3L 12304178 12304232 18 120 10.5 11.0 10.8 1.5 175 chr3L 12304057 intergenic not near genes chr3L 12304144 intergenic not near genes chr3L 12304232 intergenic not near genes chr3L_18_12300001 chr3L_12300001 RAL-850 1955 chr3L 12307560 12307590 chr3L 12307690 12307720 7 130 10.0 0.0 5.0 1.2 160 chr3L 12307560 intergenic not near genes chr3L 12307640 intergenic not near genes chr3L 12307720 intergenic not near genes chr3L_7_12305001 chr3L_12305001 RAL-850 1956 chr3L 12326704 12326768 chr3L 12326830 12326894 21 125 11.5 9.5 10.5 1.8 190 chr3L 12326704 intergenic not near genes chr3L 12326799 intergenic not near genes chr3L 12326894 intergenic not near genes chr3L_21_12325001 chr3L_12325001 RAL-850 1957 chr3L 12335336 12335417 chr3L 12335465 12335519 26 112 11.5 9.5 10.5 2.3 183 chr3L 12335336 exon CG32105 + chr3L 12335428 3` UTR CG32105 + chr3L 12335519 3` UTR CG32105 + chr3L_26_12335001 chr3L_12335001 RAL-850 1958 chr3L 12353875 12353942 chr3L 12354014 12354081 20 132 3.0 9.0 6.0 2.9 206 chr3L 12353875 intergenic not near genes chr3L 12353978 intergenic not near genes chr3L 12354081 intergenic not near genes chr3L_20_12350001 chr3L_12350001 RAL-850 1959 chr3L 12364138 12364175 chr3L 12364319 12364357 12 183 5.0 6.0 5.5 1.8 219 chr3L 12364138 intergenic not near genes chr3L 12364248 intergenic not near genes chr3L 12364357 intergenic not near genes chr3L_12_12360001 chr3L_12360001 RAL-850 1960 chr3L 12369480 12369562 chr3L 12369704 12369787 18 224 3.0 2.0 2.5 5.1 307 chr3L 12369480 intron Ncc69 - chr3L 12369634 intron Ncc69 - chr3L 12369787 intron Ncc69 - chr3L_18_12365001 chr3L_12365001 RAL-850 1961 chr3L 12381534 12381550 chr3L 12381662 12381678 9 128 6.5 12.5 9.5 0.9 144 chr3L 12381534 intron Ncc69 - chr3L 12381606 intron Ncc69 - chr3L 12381678 intron Ncc69 - chr3L_9_12380001 chr3L_12380001 RAL-850 1962 chr3L 12458487 12458508 chr3L 12458636 12458657 9 149 6.0 12.5 9.2 0.9 170 chr3L 12458487 intergenic not near genes chr3L 12458572 intergenic not near genes chr3L 12458657 intergenic not near genes chr3L_9_12455001 chr3L_12455001 RAL-850 1963 chr3L 12467206 12467282 chr3L 12467341 12467417 19 135 5.0 5.0 5.0 3.2 211 chr3L 12467206 intron eyg - chr3L 12467312 intron eyg - chr3L 12467417 intron eyg - chr3L_19_12465001 chr3L_12465001 RAL-850 1964 chr3L 12491676 12491734 chr3L 12491809 12491867 8 133 0.0 10.5 5.2 1.3 191 chr3L 12491676 intergenic CG10657 -,CR45682 +,CR45681 + chr3L 12491772 intergenic CG10657 -,CR45682 + chr3L 12491867 3` UTR,5` UTR CG10657 -,CR45682 + chr3L_8_12490001 chr3L_12490001 RAL-850 1965 chr3L 12578010 12578055 chr3L 12578148 12578193 8 138 9.0 0.0 4.5 1.5 183 chr3L 12578010 intergenic not near genes chr3L 12578102 intergenic not near genes chr3L 12578193 intergenic not near genes chr3L_8_12575001 chr3L_12575001 RAL-850 1966 chr3L 12591588 12591595 chr3L 12591715 12591722 4 126 21.0 18.0 19.5 0.2 134 chr3L 12591588 intron ara + chr3L 12591655 intron ara + chr3L 12591722 intron ara + chr3L_4_12590001 chr3L_12590001 RAL-850 1967 chr3L 12591602 12591637 chr3L 12591709 12591734 14 114 14.0 17.5 15.8 0.8 132 chr3L 12591602 intron ara + chr3L 12591668 intron ara + chr3L 12591734 intron ara + chr3L_14_12590001 chr3L_12590001 RAL-850 1968 chr3L 12622676 12622733 chr3L 12622807 12622864 13 131 0.0 6.5 3.2 3.1 188 chr3L 12622676 intergenic not near genes chr3L 12622770 intergenic not near genes chr3L 12622864 intergenic not near genes chr3L_13_12620001 chr3L_12620001 RAL-850 1969 chr3L 12626128 12626160 chr3L 12626280 12626319 17 158 4.5 8.5 6.5 2.3 191 chr3L 12626128 intergenic not near genes chr3L 12626224 intergenic not near genes chr3L 12626319 intergenic not near genes chr3L_17_12625001 chr3L_12625001 RAL-850 1970 chr3L 12647900 12647937 chr3L 12648026 12648063 18 124 14.5 0.5 7.5 2.1 163 chr3L 12647900 5` UTR CR32111 + chr3L 12647982 5` UTR CR32111 + chr3L 12648063 5` UTR CR32111 + chr3L_18_12645001 chr3L_12645001 RAL-850 1971 chr3L 12661974 12661995 chr3L 12662134 12662155 4 158 9.5 7.5 8.5 0.4 181 chr3L 12661974 5` UTR CR44552 + chr3L 12662064 5` UTR CR44552 + chr3L 12662155 5` UTR CR44552 + chr3L_4_12660001 chr3L_12660001 RAL-850 1972 chr3L 12662001 12662020 chr3L 12662129 12662169 4 137 5.0 5.5 5.2 0.6 168 chr3L 12662001 5` UTR CR44552 + chr3L 12662085 5` UTR CR44552 + chr3L 12662169 5` UTR CR44552 + chr3L_4_12660001 chr3L_12660001 RAL-850 1973 chr3L 12662024 12662038 chr3L 12662119 12662165 8 130 3.0 5.0 4.0 1.6 141 chr3L 12662024 5` UTR CR44552 + chr3L 12662094 5` UTR CR44552 + chr3L 12662165 5` UTR CR44552 + chr3L_8_12660001 chr3L_12660001 RAL-850 1974 chr3L 12685197 12685209 chr3L 12685334 12685346 6 137 7.5 0.0 3.8 1.2 149 chr3L 12685197 intergenic not near genes chr3L 12685272 intergenic not near genes chr3L 12685346 intergenic not near genes chr3L_6_12685001 chr3L_12685001 RAL-850 1975 chr3L 12727986 12728043 chr3L 12728120 12728177 14 134 6.5 11.0 8.8 1.4 191 chr3L 12727986 intergenic not near genes chr3L 12728082 intergenic not near genes chr3L 12728177 intergenic not near genes chr3L_14_12725001 chr3L_12725001 RAL-850 1976 chr3L 12808620 12808682 chr3L 12808752 12808814 16 132 11.0 14.0 12.5 1.2 194 chr3L 12808620 intron Sap130 + chr3L 12808717 intron Sap130 + chr3L 12808814 intron,exon Sap130 +,CG32110 + chr3L_16_12805001 chr3L_12805001 RAL-850 1977 chr3L 12857964 12858005 chr3L 12858109 12858150 19 145 0.0 9.5 4.8 3.3 186 chr3L 12857964 3` UTR CG32107 - chr3L 12858057 3` UTR CG32107 - chr3L 12858150 3` UTR CG32107 - chr3L_19_12855001 chr3L_12855001 RAL-850 1978 chr3L 12874876 12874949 chr3L 12877218 12877291 jockey 27 2339 8.5 7.5 8.0 3.0 2415 chr3L 12874876 intergenic not near genes chr3L 12876084 intergenic not near genes chr3L 12877291 intergenic not near genes chr3L_27_12875001 chr3L_12875001 RAL-850 1979 chr3L 12892880 12892908 chr3L 12893036 12893064 5 156 4.0 4.5 4.2 1.0 184 chr3L 12892880 intron CG14118 + chr3L 12892972 intron CG14118 + chr3L 12893064 intron CG14118 + chr3L_5_12890001 chr3L_12890001 RAL-850 1980 chr3L 12894765 12894767 chr3L 12894893 12894895 4 128 21.0 19.5 20.2 0.2 130 chr3L 12894765 intergenic CG14118 + chr3L 12894830 intergenic CG14118 + chr3L 12894895 intergenic CG14118 + chr3L_4_12890001 chr3L_12890001 RAL-850 1981 chr3L 12894769 12894812 chr3L 12894892 12894915 28 126 18.0 19.5 18.8 1.4 146 chr3L 12894769 intergenic CG14118 + chr3L 12894842 intergenic CG14118 + chr3L 12894915 intergenic CG14118 + chr3L_28_12890001 chr3L_12890001 RAL-850 1982 chr3L 12919256 12919309 chr3L 12924749 12924836 Rt1c 12 5508 8.0 4.5 6.2 1.7 5580 chr3L 12919256 intergenic not near genes chr3L 12922046 intergenic not near genes chr3L 12924836 intergenic not near genes chr3L_12_12920001 chr3L_12920001 RAL-850 1983 chr3L 12957737 12957812 chr3L 12962269 12962344 copia 16 4531 5.0 7.0 6.0 2.3 4607 chr3L 12957737 intergenic not near genes chr3L 12960040 intergenic not near genes chr3L 12962344 intergenic not near genes chr3L_16_12960001 chr3L_12960001 RAL-850 1984 chr3L 12978710 12978782 chr3L 12978839 12978911 10 129 10.5 0.5 5.5 1.5 201 chr3L 12978710 intergenic not near genes chr3L 12978810 intergenic not near genes chr3L 12978911 intergenic not near genes chr3L_10_12975001 chr3L_12975001 RAL-850 1985 chr3L 13010919 13010960 chr3L 13011097 13011139 26 176 19.5 14.0 16.8 1.5 220 chr3L 13010919 exon CG11261 - chr3L 13011029 exon CG11261 - chr3L 13011139 exon CG11261 - chr3L_26_13010001 chr3L_13010001 RAL-850 1986 chr3L 13010961 13010982 chr3L 13011088 13011161 19 164 15.5 10.0 12.8 1.4 200 chr3L 13010961 exon CG11261 - chr3L 13011061 exon CG11261 - chr3L 13011161 exon CG11261 - chr3L_19_13010001 chr3L_13010001 RAL-850 1987 chr3L 13017877 13017912 chr3L 13018009 13018044 12 132 11.0 9.5 10.2 1.1 167 chr3L 13017877 intergenic mRpL20 -,ste14 +,CR45445 - chr3L 13017960 intergenic mRpL20 -,ste14 +,CR45445 - chr3L 13018044 intergenic mRpL20 -,ste14 +,CR45445 - chr3L_12_13015001 chr3L_13015001 RAL-850 1988 chr3L 13036536 13036600 chr3L 13036668 13036732 24 131 9.5 8.5 9.0 2.4 196 chr3L 13036536 intergenic CG17672 +,SRm160 + chr3L 13036634 intergenic CG17672 +,SRm160 + chr3L 13036732 intergenic SRm160 +,CG17672 + chr3L_24_13035001 chr3L_13035001 RAL-850 1989 chr3L 13073995 13074065 chr3L 13074178 13074249 30 183 8.0 9.5 8.8 3.1 254 chr3L 13073995 intergenic not near genes chr3L 13074122 intergenic not near genes chr3L 13074249 intergenic not near genes chr3L_30_13070001 chr3L_13070001 RAL-850 1990 chr3L 13128013 13128049 chr3L 13128236 13128272 12 217 21.5 8.5 15.0 0.8 259 chr3L 13128013 intergenic not near genes chr3L 13128142 intergenic not near genes chr3L 13128272 intergenic not near genes chr3L_12_13125001 chr3L_13125001 RAL-850 1991 chr3L 13128051 13128081 chr3L 13128230 13128304 17 206 16.0 8.0 12.0 1.3 253 chr3L 13128051 intergenic not near genes chr3L 13128178 intergenic not near genes chr3L 13128304 intergenic not near genes chr3L_17_13125001 chr3L_13125001 RAL-850 1992 chr3L 13142091 13142162 chr3L 13142226 13142297 25 135 5.0 9.5 7.2 3.0 206 chr3L 13142091 intergenic not near genes chr3L 13142194 intergenic not near genes chr3L 13142297 intergenic not near genes chr3L_25_13140001 chr3L_13140001 RAL-850 1993 chr3L 13159255 13159296 chr3L 13159384 13159425 7 129 7.0 11.0 9.0 0.7 170 chr3L 13159255 intergenic not near genes chr3L 13159340 intergenic not near genes chr3L 13159425 intergenic not near genes chr3L_7_13155001 chr3L_13155001 RAL-850 1994 chr3L 13161728 13161797 chr3L 13161854 13161923 32 125 5.5 8.5 7.0 4.0 195 chr3L 13161728 intergenic not near genes chr3L 13161826 intergenic not near genes chr3L 13161923 intergenic not near genes chr3L_32_13160001 chr3L_13160001 RAL-850 1995 chr3L 13208311 13208372 chr3L 13208440 13208501 7 128 8.0 0.0 4.0 1.4 190 chr3L 13208311 intergenic CR45096 - chr3L 13208406 intergenic CR45096 - chr3L 13208501 intergenic CR45096 - chr3L_7_13205001 chr3L_13205001 RAL-850 1996 chr3L 13223171 13223241 chr3L 13223296 13223368 15 121 8.0 14.5 11.2 1.2 197 chr3L 13223171 intergenic not near genes chr3L 13223270 intergenic not near genes chr3L 13223368 intergenic not near genes chr3L_15_13220001 chr3L_13220001 RAL-850 1997 chr3L 13245054 13245070 chr3L 13245233 13245246 7 180 17.0 6.0 11.5 0.6 192 chr3L 13245054 intron caps + chr3L 13245150 intron caps + chr3L 13245246 intron caps + chr3L_7_13245001 chr3L_13245001 RAL-850 1998 chr3L 13267240 13267314 chr3L 13267403 13267477 22 162 7.0 5.0 6.0 3.1 237 chr3L 13267240 intron caps + chr3L 13267358 intron caps + chr3L 13267477 intron caps + chr3L_22_13265001 chr3L_13265001 RAL-850 1999 chr3L 13311754 13311814 chr3L 13311882 13311942 23 128 9.5 6.5 8.0 2.6 188 chr3L 13311754 intergenic not near genes chr3L 13311848 intergenic not near genes chr3L 13311942 intergenic not near genes chr3L_23_13310001 chr3L_13310001 RAL-850 2000 chr3L 13315811 13315863 chr3L 13315948 13316000 8 137 4.0 2.0 3.0 2.0 189 chr3L 13315811 intergenic not near genes chr3L 13315906 intergenic not near genes chr3L 13316000 intergenic not near genes chr3L_8_13315001 chr3L_13315001 RAL-850 2001 chr3L 13317748 13317815 chr3L 13317888 13317955 36 140 0.0 11.0 5.5 5.5 207 chr3L 13317748 intergenic not near genes chr3L 13317852 intergenic not near genes chr3L 13317955 intergenic not near genes chr3L_36_13315001 chr3L_13315001 RAL-850 2002 chr3L 13337131 13337157 chr3L 13337272 13337298 20 141 0.0 11.5 5.8 2.9 167 chr3L 13337131 intergenic not near genes chr3L 13337214 intergenic not near genes chr3L 13337298 intergenic not near genes chr3L_20_13335001 chr3L_13335001 RAL-850 2003 chr3L 13400484 13400543 chr3L 13400609 13400669 14 126 3.0 6.0 4.5 2.5 185 chr3L 13400484 intron sens - chr3L 13400576 intron sens - chr3L 13400669 intron sens - chr3L_14_13400001 chr3L_13400001 RAL-850 2004 chr3L 13432246 13432323 chr3L 13432395 13432455 24 146 8.5 10.5 9.5 2.3 209 chr3L 13432246 intron CG10713 - chr3L 13432350 intron CG10713 - chr3L 13432455 intron CG10713 - chr3L_24_13430001 chr3L_13430001 RAL-850 2005 chr3L 13486415 13486465 chr3L 13486711 13486760 24 296 0.0 12.5 6.2 3.3 345 chr3L 13486415 intergenic Abp1 -,Tgi + chr3L 13486588 intergenic Tgi +,Abp1 - chr3L 13486760 intergenic Tgi +,Abp1 - chr3L_24_13485001 chr3L_13485001 RAL-850 2006 chr3L 13493557 13493576 chr3L 13493687 13493706 10 130 2.0 8.5 5.2 1.6 149 chr3L 13493557 intron Tgi + chr3L 13493632 intron Tgi + chr3L 13493706 intron Tgi + chr3L_10_13490001 chr3L_13490001 RAL-850 2007 chr3L 13525114 13525181 chr3L 13532960 13532996 roo 40 7844 14.0 12.0 13.0 2.9 7882 chr3L 13525114 intergenic not near genes chr3L 13529055 intergenic not near genes chr3L 13532996 intergenic not near genes chr3L_40_13525001 chr3L_13525001 RAL-850 2008 chr3L 13574578 13574620 chr3L 13580138 13580170 Rt1c 8 5551 12.0 8.0 10.0 0.7 5592 chr3L 13574578 intron bru-3 - chr3L 13577374 intron bru-3 - chr3L 13580170 intron bru-3 - chr3L_8_13575001 chr3L_13575001 RAL-850 2009 chr3L 13629477 13629542 chr3L 13629638 13629697 25 156 10.0 8.5 9.2 2.5 220 chr3L 13629477 intron bru-3 - chr3L 13629587 intron bru-3 - chr3L 13629697 intron bru-3 - chr3L_25_13625001 chr3L_13625001 RAL-850 2010 chr3L 13684515 13684575 chr3L 13684626 13684702 9 122 4.0 0.0 2.0 3.0 187 chr3L 13684515 intron bru-3 - chr3L 13684608 intron bru-3 - chr3L 13684702 intron bru-3 - chr3L_9_13680001 chr3L_13680001 RAL-850 2011 chr3L 13701514 13701581 chr3L 13701687 13701754 31 172 16.0 8.0 12.0 2.4 240 chr3L 13701514 intron bru-3 - chr3L 13701634 intron bru-3 - chr3L 13701754 intron bru-3 - chr3L_31_13700001 chr3L_13700001 RAL-850 2012 chr3L 13774602 13774662 chr3L 13774728 13774773 27 132 4.5 6.5 5.5 4.2 171 chr3L 13774602 intron bru-3 - chr3L 13774688 intron bru-3 - chr3L 13774773 intron bru-3 - chr3L_27_13770001 chr3L_13770001 RAL-850 2013 chr3L 13804502 13804574 chr3L 13822838 13822883 roo 34 18334 8.5 7.5 8.0 3.8 18381 chr3L 13804502 intergenic not near genes chr3L 13813692 intergenic not near genes chr3L 13822883 intergenic not near genes chr3L_34_13810001 chr3L_13810001 RAL-850 2014 chr3L 13833714 13833793 chr3L 13833901 13833978 20 184 4.0 4.0 4.0 4.0 264 chr3L 13833714 intergenic not near genes chr3L 13833846 intergenic not near genes chr3L 13833978 intergenic not near genes chr3L_20_13830001 chr3L_13830001 RAL-850 2015 chr3L 13884329 13884381 chr3L 13884470 13884519 16 139 13.5 0.0 6.8 2.1 190 chr3L 13884329 intron dysc - chr3L 13884424 intron dysc - chr3L 13884519 intron dysc - chr3L_16_13880001 chr3L_13880001 RAL-850 2016 chr3L 13920369 13920433 chr3L 13920499 13920553 31 130 8.0 6.0 7.0 3.9 184 chr3L 13920369 intron Rgl - chr3L 13920461 intron Rgl - chr3L 13920553 intron Rgl - chr3L_31_13920001 chr3L_13920001 RAL-850 2017 chr3L 13954425 13954435 chr3L 13954554 13954564 4 129 11.0 7.0 9.0 0.4 139 chr3L 13954425 intron CG32137 + chr3L 13954494 intron CG32137 + chr3L 13954564 intron CG32137 + chr3L_4_13950001 chr3L_13950001 RAL-850 2018 chr3L 13975222 13975264 chr3L 13975360 13975402 11 138 0.5 12.0 6.2 1.5 180 chr3L 13975222 intron Hsc70-1 + chr3L 13975312 intron Hsc70-1 + chr3L 13975402 intron Hsc70-1 + chr3L_11_13975001 chr3L_13975001 RAL-850 2019 chr3L 13988693 13988725 chr3L 13989742 13989779 13 1047 24.0 38.0 31.0 0.4 1086 chr3L 13988693 intron CG17364 - chr3L 13989236 intron CG17364 - chr3L 13989779 intron CG17364 - chr3L_13_13985001 chr3L_13985001 RAL-850 2020 chr3L 13988733 13988755 chr3L 13989766 13989809 9 1046 26.5 47.0 36.8 0.2 1076 chr3L 13988733 intron CG17364 - chr3L 13989271 intron CG17364 - chr3L 13989809 intron CG17364 - chr3L_9_13985001 chr3L_13985001 RAL-850 2021 chr3L 13988747 13988812 chr3L 13990306 13990371 27 1559 36.0 60.0 48.0 0.6 1624 chr3L 13988747 intron CG17364 - chr3L 13989559 intron CG17364 - chr3L 13990371 intron CG17364 - chr3L_27_13985001 chr3L_13985001 RAL-850 2022 chr3L 13993962 13994011 chr3L 13994092 13994142 6 131 1.5 10.0 5.8 0.9 180 chr3L 13993962 intergenic 26-29-p + chr3L 13994052 intergenic 26-29-p + chr3L 13994142 intergenic 26-29-p + chr3L_6_13990001 chr3L_13990001 RAL-850 2023 chr3L 14056731 14056744 chr3L 14056883 14056896 8 151 8.0 9.0 8.5 0.8 165 chr3L 14056731 intron CG32138 + chr3L 14056814 intron CG32138 + chr3L 14056896 intron CG32138 + chr3L_8_14055001 chr3L_14055001 RAL-850 2024 chr3L 14076023 14076104 chr3L 14076152 14076233 19 129 6.0 0.0 3.0 4.8 210 chr3L 14076023 3` UTR,5` UTR Pex1 +,btl + chr3L 14076128 intron btl + chr3L 14076233 intron btl + chr3L_19_14075001 chr3L_14075001 RAL-850 2025 chr3L 14089438 14089512 chr3L 14089585 14089659 22 147 3.0 0.5 1.8 7.9 221 chr3L 14089438 intergenic not near genes chr3L 14089548 intergenic not near genes chr3L 14089659 intergenic not near genes chr3L_22_14085001 chr3L_14085001 RAL-850 2026 chr3L 14141716 14141782 chr3L 14141856 14141922 24 139 8.0 11.0 9.5 2.3 206 chr3L 14141716 intergenic not near genes chr3L 14141819 intergenic not near genes chr3L 14141922 intergenic not near genes chr3L_24_14140001 chr3L_14140001 RAL-850 2027 chr3L 14168294 14168308 chr3L 14168425 14168439 9 131 2.0 0.0 1.0 4.5 145 chr3L 14168294 intergenic not near genes chr3L 14168366 intergenic not near genes chr3L 14168439 intergenic not near genes chr3L_9_14165001 chr3L_14165001 RAL-850 2028 chr3L 14174067 14174092 chr3L 14174193 14174218 7 126 13.5 9.0 11.2 0.6 151 chr3L 14174067 intergenic not near genes chr3L 14174142 intergenic not near genes chr3L 14174218 intergenic not near genes chr3L_7_14170001 chr3L_14170001 RAL-850 2029 chr3L 14175303 14175381 chr3L 14175501 14175579 18 198 5.0 6.0 5.5 2.8 276 chr3L 14175303 intergenic D - chr3L 14175441 intergenic D - chr3L 14175579 intergenic D - chr3L_18_14175001 chr3L_14175001 RAL-850 2030 chr3L 14194673 14194732 chr3L 14194799 14194858 17 125 7.0 1.0 4.0 3.4 185 chr3L 14194673 intron nuf + chr3L 14194766 intron nuf + chr3L 14194858 intron nuf + chr3L_17_14190001 chr3L_14190001 RAL-850 2031 chr3L 14196366 14196443 chr3L 14196501 14196578 27 133 3.5 4.5 4.0 5.4 212 chr3L 14196366 intron nuf + chr3L 14196472 intron nuf + chr3L 14196578 intron nuf + chr3L_27_14195001 chr3L_14195001 RAL-850 2032 chr3L 14212845 14212877 chr3L 14213063 14213096 4 219 0.5 5.0 2.8 1.1 251 chr3L 14212845 intron nuf + chr3L 14212970 intron nuf + chr3L 14213096 exon nuf + chr3L_4_14210001 chr3L_14210001 RAL-850 2033 chr3L 14214797 14214870 chr3L 14214922 14215005 23 128 0.5 8.0 4.2 4.4 208 chr3L 14214797 intron nuf + chr3L 14214901 intron nuf + chr3L 14215005 intron nuf + chr3L_23_14210001 chr3L_14210001 RAL-850 2034 chr3L 14216161 14216231 chr3L 14216346 14216416 29 181 10.5 8.5 9.5 2.8 255 chr3L 14216161 intron nuf + chr3L 14216288 intron nuf + chr3L 14216416 intron nuf + chr3L_29_14215001 chr3L_14215001 RAL-850 2035 chr3L 14223277 14223348 chr3L 14223442 14223503 43 163 5.0 6.5 5.8 6.3 226 chr3L 14223277 intron nuf + chr3L 14223390 intron nuf + chr3L 14223503 intron nuf + chr3L_43_14220001 chr3L_14220001 RAL-850 2036 chr3L 14239938 14240007 chr3L 14240085 14240154 29 146 6.0 6.0 6.0 4.1 216 chr3L 14239938 intergenic CR45399 - chr3L 14240046 intergenic not near genes chr3L 14240154 intergenic not near genes chr3L_29_14240001 chr3L_14240001 RAL-850 2037 chr3L 14250795 14250867 chr3L 14250934 14251006 20 134 8.0 9.0 8.5 2.1 211 chr3L 14250795 intergenic not near genes chr3L 14250900 intergenic not near genes chr3L 14251006 intergenic not near genes chr3L_20_14250001 chr3L_14250001 RAL-850 2038 chr3L 14267329 14267355 chr3L 14271819 14271845 F-element 10 4488 16.5 0.0 8.2 1.1 4516 chr3L 14267329 intergenic not near genes chr3L 14269587 intergenic not near genes chr3L 14271845 intergenic not near genes chr3L_10_14265001 chr3L_14265001 RAL-850 2039 chr3L 14267392 14267404 chr3L 14271898 14271910 F-element 5 4506 7.5 7.0 7.2 0.6 4518 chr3L 14267392 intergenic not near genes chr3L 14269651 intergenic not near genes chr3L 14271910 intergenic not near genes chr3L_5_14265001 chr3L_14265001 RAL-850 2040 chr3L 14282593 14282601 chr3L 14282697 14282721 4 115 0.0 23.5 11.8 0.3 128 chr3L 14282593 intron fz + chr3L 14282657 intron fz + chr3L 14282721 intron fz + chr3L_4_14280001 chr3L_14280001 RAL-850 2041 chr3L 14282603 14282607 chr3L 14282676 14282737 5 108 2.5 15.5 9.0 0.5 134 chr3L 14282603 intron fz + chr3L 14282670 intron fz + chr3L 14282737 intron fz + chr3L_5_14280001 chr3L_14280001 RAL-850 2042 chr3L 14295937 14296006 chr3L 14296473 14296542 roo 28 534 9.0 11.0 10.0 2.5 605 chr3L 14295937 intron fz + chr3L 14296240 intron fz + chr3L 14296542 intron fz + chr3L_28_14295001 chr3L_14295001 RAL-850 2043 chr3L 14309567 14309605 chr3L 14309702 14309740 15 135 0.0 12.5 6.2 2.1 173 chr3L 14309567 intron fz + chr3L 14309654 intron fz + chr3L 14309740 intron fz + chr3L_15_14305001 chr3L_14305001 RAL-850 2044 chr3L 14312011 14312055 chr3L 14316839 14316888 X-element 14 4834 4.5 6.5 5.5 2.2 4877 chr3L 14312011 exon fz + chr3L 14314450 intron fz + chr3L 14316888 intron fz + chr3L_14_14310001 chr3L_14310001 RAL-850 2045 chr3L 14338260 14338328 chr3L 14338406 14338471 12 145 2.0 8.0 5.0 2.0 211 chr3L 14338260 intron fz + chr3L 14338366 intron fz + chr3L 14338471 intron fz + chr3L_12_14335001 chr3L_14335001 RAL-850 2046 chr3L 14341397 14341398 chr3L 14341550 14341583 4 177 1.0 5.5 3.2 1.0 186 chr3L 14341397 intron fz + chr3L 14341490 intron fz + chr3L 14341583 intron fz + chr3L_4_14340001 chr3L_14340001 RAL-850 2047 chr3L 14341403 14341439 chr3L 14341588 14341624 8 185 0.0 11.5 5.8 1.2 221 chr3L 14341403 intron fz + chr3L 14341514 intron fz + chr3L 14341624 intron fz + chr3L_8_14340001 chr3L_14340001 RAL-850 2048 chr3L 14345879 14345929 chr3L 14346015 14346082 30 148 6.0 7.0 6.5 4.0 203 chr3L 14345879 intron fz + chr3L 14345980 intron fz + chr3L 14346082 intron fz + chr3L_30_14345001 chr3L_14345001 RAL-850 2049 chr3L 14356473 14356552 chr3L 14356603 14356657 39 126 6.0 10.5 8.2 4.2 184 chr3L 14356473 intron fz + chr3L 14356565 intron fz + chr3L 14356657 intron fz + chr3L_39_14355001 chr3L_14355001 RAL-850 2050 chr3L 14375605 14375669 chr3L 14375772 14375832 13 161 6.5 5.0 5.8 1.9 227 chr3L 14375605 intergenic not near genes chr3L 14375718 intergenic not near genes chr3L 14375832 intergenic not near genes chr3L_13_14375001 chr3L_14375001 RAL-850 2051 chr3L 14392157 14392184 chr3L 14392289 14392316 5 132 8.0 0.0 4.0 1.0 159 chr3L 14392157 intergenic not near genes chr3L 14392236 intergenic not near genes chr3L 14392316 intergenic not near genes chr3L_5_14390001 chr3L_14390001 RAL-850 2052 chr3L 14399126 14399142 chr3L 14399265 14399281 9 139 17.5 0.0 8.8 0.9 155 chr3L 14399126 intergenic not near genes chr3L 14399204 intergenic not near genes chr3L 14399281 intergenic not near genes chr3L_9_14395001 chr3L_14395001 RAL-850 2053 chr3L 14411814 14411885 chr3L 14411943 14412014 31 129 8.5 5.5 7.0 3.9 200 chr3L 14411814 intron CG3919 + chr3L 14411914 intron CG3919 + chr3L 14412014 intron CG3919 + chr3L_31_14410001 chr3L_14410001 RAL-850 2054 chr3L 14417505 14417576 chr3L 14417646 14417714 13 136 9.5 7.5 8.5 1.4 209 chr3L 14417505 intron bbg - chr3L 14417610 intron bbg - chr3L 14417714 intron bbg - chr3L_13_14415001 chr3L_14415001 RAL-850 2055 chr3L 14439174 14439238 chr3L 14439377 14439451 21 211 4.5 6.0 5.2 3.4 277 chr3L 14439174 intron bbg - chr3L 14439312 intron bbg - chr3L 14439451 intron bbg - chr3L_21_14435001 chr3L_14435001 RAL-850 2056 chr3L 14454044 14454061 chr3L 14454179 14454201 6 139 8.5 18.5 13.5 0.4 157 chr3L 14454044 intron bbg - chr3L 14454122 intron bbg - chr3L 14454201 intron bbg - chr3L_6_14450001 chr3L_14450001 RAL-850 2057 chr3L 14467081 14467137 chr3L 14467219 14467275 28 136 13.5 9.0 11.2 2.3 194 chr3L 14467081 intron bbg - chr3L 14467178 intron bbg - chr3L 14467275 intron bbg - chr3L_28_14465001 chr3L_14465001 RAL-850 2058 chr3L 14468409 14468466 chr3L 14473665 14473722 copia 22 5256 8.0 5.0 6.5 2.9 5313 chr3L 14468409 intron bbg - chr3L 14471066 intron bbg - chr3L 14473722 intron bbg - chr3L_22_14470001 chr3L_14470001 RAL-850 2059 chr3L 14473861 14473873 chr3L 14473967 14474000 8 118 14.5 15.0 14.8 0.5 139 chr3L 14473861 intron bbg - chr3L 14473930 intron bbg - chr3L 14474000 intron bbg - chr3L_8_14470001 chr3L_14470001 RAL-850 2060 chr3L 14485975 14486045 chr3L 14486106 14486176 18 131 6.0 11.0 8.5 1.9 201 chr3L 14485975 intron bbg - chr3L 14486076 intron bbg - chr3L 14486176 intron bbg - chr3L_18_14485001 chr3L_14485001 RAL-850 2061 chr3L 14522051 14522126 chr3L 14522200 14522270 15 149 4.5 6.5 5.5 2.3 219 chr3L 14522051 intron bbg - chr3L 14522160 intron bbg - chr3L 14522270 intron bbg - chr3L_15_14520001 chr3L_14520001 RAL-850 2062 chr3L 14537283 14537295 chr3L 14537427 14537439 5 144 0.0 14.5 7.2 0.6 156 chr3L 14537283 intergenic CG43246 +,Mpcp + chr3L 14537361 intergenic CG43246 +,Mpcp + chr3L 14537439 intergenic CG43246 +,Mpcp + chr3L_5_14535001 chr3L_14535001 RAL-850 2063 chr3L 14546761 14546817 chr3L 14546912 14546968 13 151 0.0 10.5 5.2 2.1 207 chr3L 14546761 intron CG9238 - chr3L 14546864 intron CG9238 - chr3L 14546968 intron CG9238 - chr3L_13_14545001 chr3L_14545001 RAL-850 2064 chr3L 14565697 14565768 chr3L 14565838 14565893 23 140 8.0 0.0 4.0 4.6 196 chr3L 14565697 intergenic not near genes chr3L 14565795 intergenic not near genes chr3L 14565893 intergenic not near genes chr3L_23_14565001 chr3L_14565001 RAL-850 2065 chr3L 14571602 14571662 chr3L 14571731 14571791 22 129 11.0 2.5 6.8 2.8 189 chr3L 14571602 intergenic not near genes chr3L 14571696 intergenic not near genes chr3L 14571791 intergenic not near genes chr3L_22_14570001 chr3L_14570001 RAL-850 2066 chr3L 14585564 14585581 chr3L 14585692 14585709 5 126 20.5 6.5 13.5 0.3 145 chr3L 14585564 intron HGTX - chr3L 14585636 intron HGTX - chr3L 14585709 intron HGTX - chr3L_5_14585001 chr3L_14585001 RAL-850 2067 chr3L 14585583 14585632 chr3L 14585691 14585760 20 125 11.5 6.5 9.0 2.0 177 chr3L 14585583 intron HGTX - chr3L 14585672 intron HGTX - chr3L 14585760 intron HGTX - chr3L_20_14585001 chr3L_14585001 RAL-850 2068 chr3L 14654669 14654715 chr3L 14654806 14654852 20 135 5.5 6.5 6.0 2.9 183 chr3L 14654669 intron dlp + chr3L 14654760 intron dlp + chr3L 14654852 intron dlp + chr3L_20_14650001 chr3L_14650001 RAL-850 2069 chr3L 14711517 14711588 chr3L 14712164 14712235 14 645 3.0 5.0 4.0 2.8 718 chr3L 14711517 intron ome + chr3L 14711876 intron ome + chr3L 14712235 intron ome + chr3L_14_14710001 chr3L_14710001 RAL-850 2070 chr3L 14721140 14721190 chr3L 14723028 14723061 Rt1c 22 1890 10.5 9.5 10.0 2.0 1921 chr3L 14721140 intron ome + chr3L 14722100 intron ome + chr3L 14723061 intron ome + chr3L_22_14720001 chr3L_14720001 RAL-850 2071 chr3L 14721191 14721202 chr3L 14723023 14723095 Rt1c 6 1878 9.0 8.0 8.5 0.6 1904 chr3L 14721191 intron ome + chr3L 14722143 intron ome + chr3L 14723095 intron ome + chr3L_6_14720001 chr3L_14720001 RAL-850 2072 chr3L 14725569 14725619 chr3L 14728613 14728633 Doc 12 3042 5.0 9.0 7.0 1.5 3064 chr3L 14725569 intron ome + chr3L 14727101 intron ome + chr3L 14728633 intron ome + chr3L_12_14725001 chr3L_14725001 RAL-850 2073 chr3L 14741093 14741167 chr3L 14741221 14741295 39 126 6.5 10.5 8.5 4.1 202 chr3L 14741093 intron ome + chr3L 14741194 intron ome + chr3L 14741295 intron ome + chr3L_39_14740001 chr3L_14740001 RAL-850 2074 chr3L 14861766 14861808 chr3L 14861896 14861938 11 130 10.0 4.5 7.2 1.3 172 chr3L 14861766 intron CG17839 + chr3L 14861852 intron CG17839 + chr3L 14861938 intron CG17839 + chr3L_11_14860001 chr3L_14860001 RAL-850 2075 chr3L 14912682 14912747 chr3L 14915206 14915271 22 2531 53.5 61.5 57.5 0.4 2589 chr3L 14912682 intron DCX-EMAP + chr3L 14913976 intron DCX-EMAP + chr3L 14915271 intron DCX-EMAP + chr3L_22_14910001 chr3L_14910001 RAL-850 2076 chr3L 14918465 14918527 chr3L 14918590 14918664 22 134 2.5 10.0 6.2 3.1 199 chr3L 14918465 intron DCX-EMAP + chr3L 14918564 intron DCX-EMAP + chr3L 14918664 intron DCX-EMAP + chr3L_22_14915001 chr3L_14915001 RAL-850 2077 chr3L 14957952 14957964 chr3L 14958084 14958096 4 132 2.0 0.0 1.0 2.0 144 chr3L 14957952 intergenic not near genes chr3L 14958024 intergenic not near genes chr3L 14958096 intergenic not near genes chr3L_4_14955001 chr3L_14955001 RAL-850 2078 chr3L 14968247 14968319 chr3L 14968587 14968659 17 340 7.5 5.5 6.5 2.3 412 chr3L 14968247 intergenic not near genes chr3L 14968453 intergenic not near genes chr3L 14968659 intergenic not near genes chr3L_17_14965001 chr3L_14965001 RAL-850 2079 chr3L 14970722 14970757 chr3L 14971082 14971117 F-element 10 360 4.0 5.5 4.8 1.7 395 chr3L 14970722 intergenic Tom + chr3L 14970920 intergenic not near genes chr3L 14971117 intergenic not near genes chr3L_10_14970001 chr3L_14970001 RAL-850 2080 chr3L 15044507 15044567 chr3L 15044634 15044694 26 127 9.0 8.0 8.5 2.7 187 chr3L 15044507 intron Sytbeta - chr3L 15044600 intron Sytbeta - chr3L 15044694 intron Sytbeta - chr3L_26_15040001 chr3L_15040001 RAL-850 2081 chr3L 15048120 15048186 chr3L 15048434 15048500 28 314 46.5 47.5 47.0 0.6 380 chr3L 15048120 intron Sytbeta - chr3L 15048310 intron Sytbeta - chr3L 15048500 intron Sytbeta - chr3L_28_15045001 chr3L_15045001 RAL-850 2082 chr3L 15085008 15085019 chr3L 15086224 15086227 1360 7 1215 12.5 11.5 12.0 0.5 1219 chr3L 15085008 intron cp309 - chr3L 15085618 intron cp309 - chr3L 15086227 intron cp309 - chr3L_7_15085001 chr3L_15085001 RAL-850 2083 chr3L 15085020 15085078 chr3L 15086221 15086294 1360 14 1209 4.5 11.0 7.8 1.6 1274 chr3L 15085020 intron cp309 - chr3L 15085657 intron cp309 - chr3L 15086294 intron cp309 - chr3L_14_15085001 chr3L_15085001 RAL-850 2084 chr3L 15094921 15094962 chr3L 15095067 15095108 20 144 5.5 4.0 4.8 3.4 187 chr3L 15094921 intergenic cp309 -,CG6945 -,Aats-gly + chr3L 15095014 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095108 intergenic Aats-gly +,cp309 -,CG6945 - chr3L_20_15095001 chr3L_15095001 RAL-850 2085 chr3L 15146113 15146172 chr3L 15146240 15146311 16 132 0.0 8.0 4.0 3.2 198 chr3L 15146113 3` UTR Pex3 + chr3L 15146212 3` UTR Pex3 + chr3L 15146311 3` UTR Pex3 + chr3L_16_15145001 chr3L_15145001 RAL-850 2086 chr3L 15163608 15163615 chr3L 15163737 15163744 4 129 22.0 0.0 11.0 0.3 136 chr3L 15163608 5` UTR CG7011 - chr3L 15163676 intergenic CG7011 - chr3L 15163744 intergenic CG7011 - chr3L_4_15160001 chr3L_15160001 RAL-850 2087 chr3L 15164973 15165046 chr3L 15165121 15165195 18 148 2.0 3.0 2.5 5.1 222 chr3L 15164973 intergenic not near genes chr3L 15165084 intergenic not near genes chr3L 15165195 intergenic not near genes chr3L_18_15165001 chr3L_15165001 RAL-850 2088 chr3L 15174581 15174612 chr3L 15174728 15174765 13 149 3.0 11.0 7.0 1.6 184 chr3L 15174581 intergenic not near genes chr3L 15174673 intergenic not near genes chr3L 15174765 intergenic not near genes chr3L_13_15170001 chr3L_15170001 RAL-850 2089 chr3L 15219724 15219770 chr3L 15219856 15219902 16 132 5.5 12.0 8.8 1.6 178 chr3L 15219724 intergenic not near genes chr3L 15219813 intergenic not near genes chr3L 15219902 intergenic not near genes chr3L_16_15215001 chr3L_15215001 RAL-850 2090 chr3L 15227899 15227904 chr3L 15228025 15228028 8 129 0.5 19.5 10.0 0.7 129 chr3L 15227899 intergenic not near genes chr3L 15227964 intergenic not near genes chr3L 15228028 intergenic not near genes chr3L_8_15225001 chr3L_15225001 RAL-850 2091 chr3L 15232460 15232522 chr3L 15232591 15232653 19 131 11.0 4.5 7.8 2.2 193 chr3L 15232460 intergenic not near genes chr3L 15232556 intergenic not near genes chr3L 15232653 intergenic not near genes chr3L_19_15230001 chr3L_15230001 RAL-850 2092 chr3L 15257384 15257447 chr3L 15257647 15257710 16 263 3.5 2.0 2.8 4.2 326 chr3L 15257384 intergenic not near genes chr3L 15257547 intergenic not near genes chr3L 15257710 intergenic not near genes chr3L_16_15255001 chr3L_15255001 RAL-850 2093 chr3L 15295729 15295791 chr3L 15298622 15298684 gypsy5 22 2891 11.0 4.5 7.8 2.5 2955 chr3L 15295729 intergenic not near genes chr3L 15297206 intergenic not near genes chr3L 15298684 intergenic Best4 + chr3L_22_15295001 chr3L_15295001 RAL-850 2094 chr3L 15328534 15328546 chr3L 15328669 15328680 10 132 20.0 10.0 15.0 0.6 146 chr3L 15328534 intergenic not near genes chr3L 15328607 intergenic not near genes chr3L 15328680 intergenic not near genes chr3L_10_15325001 chr3L_15325001 RAL-850 2095 chr3L 15328575 15328611 chr3L 15328665 15328681 18 120 9.5 9.5 9.5 1.7 106 chr3L 15328575 intergenic not near genes chr3L 15328628 intergenic not near genes chr3L 15328681 intergenic not near genes chr3L_18_15325001 chr3L_15325001 RAL-850 2096 chr3L 15333089 15333166 chr3L 15333219 15333298 9 131 2.0 7.0 4.5 1.6 209 chr3L 15333089 intergenic CR43247 + chr3L 15333194 intergenic CR43247 + chr3L 15333298 intergenic CR43247 + chr3L_9_15330001 chr3L_15330001 RAL-850 2097 chr3L 15405975 15406046 chr3L 15406107 15406179 16 131 3.0 4.0 3.5 3.6 204 chr3L 15405975 intergenic not near genes chr3L 15406077 intergenic not near genes chr3L 15406179 intergenic not near genes chr3L_16_15405001 chr3L_15405001 RAL-850 2098 chr3L 15420307 15420328 chr3L 15420436 15420457 7 129 3.5 3.5 3.5 1.6 150 chr3L 15420307 intergenic not near genes chr3L 15420382 intergenic not near genes chr3L 15420457 intergenic not near genes chr3L_7_15420001 chr3L_15420001 RAL-850 2099 chr3L 15423715 15423782 chr3L 15426609 15426676 opus 25 2893 10.5 4.0 7.2 3.0 2961 chr3L 15423715 intergenic not near genes chr3L 15425196 intergenic not near genes chr3L 15426676 intergenic not near genes chr3L_25_15425001 chr3L_15425001 RAL-850 2100 chr3L 15465993 15466128 chr3L 15466125 15466274 14 153 0.0 0.0 0.0 14.0 281 chr3L 15465993 intergenic not near genes chr3L 15466134 intergenic not near genes chr3L 15466274 intergenic not near genes chr3L_14_15465001 chr3L_15465001 RAL-850 2101 chr3L 15474638 15474685 chr3L 15474827 15474869 6 187 4.5 1.0 2.8 1.6 231 chr3L 15474638 intergenic not near genes chr3L 15474754 intergenic not near genes chr3L 15474869 intergenic not near genes chr3L_6_15470001 chr3L_15470001 RAL-850 2102 chr3L 15537915 15537934 chr3L 15538041 15538060 11 125 13.5 0.0 6.8 1.4 145 chr3L 15537915 intron CrebA + chr3L 15537988 intron CrebA + chr3L 15538060 intron CrebA + chr3L_11_15535001 chr3L_15535001 RAL-850 2103 chr3L 15541574 15541636 chr3L 15541715 15541777 25 141 8.0 1.0 4.5 4.5 203 chr3L 15541574 intron CrebA + chr3L 15541676 intron CrebA + chr3L 15541777 intron CrebA + chr3L_25_15540001 chr3L_15540001 RAL-850 2104 chr3L 15541906 15541972 chr3L 15542050 15542116 12 144 0.5 9.0 4.8 2.1 210 chr3L 15541906 intron CrebA + chr3L 15542011 intron CrebA + chr3L 15542116 intron CrebA + chr3L_12_15540001 chr3L_15540001 RAL-850 2105 chr3L 15600118 15600197 chr3L 15600253 15600348 23 150 6.0 0.0 3.0 5.8 230 chr3L 15600118 intron RhoGAP71E + chr3L 15600233 intron RhoGAP71E + chr3L 15600348 intron RhoGAP71E + chr3L_23_15600001 chr3L_15600001 RAL-850 2106 chr3L 15615889 15615944 chr3L 15616035 15616090 21 146 10.5 10.5 10.5 1.8 201 chr3L 15615889 intron comm3 - chr3L 15615990 intron comm3 - chr3L 15616090 intron comm3 - chr3L_21_15615001 chr3L_15615001 RAL-850 2107 chr3L 15633140 15633202 chr3L 15633270 15633332 9 130 8.0 0.5 4.2 1.7 192 chr3L 15633140 intron comm3 - chr3L 15633236 intron comm3 - chr3L 15633332 intron comm3 - chr3L_9_15630001 chr3L_15630001 RAL-850 2108 chr3L 15641188 15641267 chr3L 15641318 15641397 21 125 2.0 6.5 4.2 4.0 209 chr3L 15641188 intron comm3 - chr3L 15641292 intron comm3 - chr3L 15641397 intron comm3 - chr3L_21_15640001 chr3L_15640001 RAL-850 2109 chr3L 15641788 15641811 chr3L 15641923 15641946 6 135 0.0 17.5 8.8 0.6 158 chr3L 15641788 intron comm3 - chr3L 15641867 intron comm3 - chr3L 15641946 intron comm3 - chr3L_6_15640001 chr3L_15640001 RAL-850 2110 chr3L 15658426 15658496 chr3L 15658565 15658635 22 138 6.5 4.5 5.5 3.4 209 chr3L 15658426 intergenic Eig71Eg + chr3L 15658530 intergenic Eig71Eg +,Eig71Eh - chr3L 15658635 intergenic Eig71Eh -,Eig71Eg + chr3L_22_15655001 chr3L_15655001 RAL-850 2111 chr3L 15756824 15756913 chr3L 15756962 15757038 15 134 2.0 0.0 1.0 7.5 214 chr3L 15756824 intergenic not near genes chr3L 15756931 intergenic not near genes chr3L 15757038 intergenic not near genes chr3L_15_15755001 chr3L_15755001 RAL-850 2112 chr3L 15760634 15760689 chr3L 15760767 15760823 7 134 3.0 0.5 1.8 2.5 189 chr3L 15760634 intergenic not near genes chr3L 15760728 intergenic not near genes chr3L 15760823 intergenic not near genes chr3L_7_15760001 chr3L_15760001 RAL-850 2113 chr3L 15769114 15769117 chr3L 15769249 15769258 4 140 0.0 7.0 3.5 0.9 144 chr3L 15769114 intergenic not near genes chr3L 15769186 intergenic not near genes chr3L 15769258 intergenic not near genes chr3L_4_15765001 chr3L_15765001 RAL-850 2114 chr3L 15803192 15803243 chr3L 15803386 15803412 17 189 11.0 8.0 9.5 1.6 220 chr3L 15803192 intergenic not near genes chr3L 15803302 intergenic not near genes chr3L 15803412 intergenic not near genes chr3L_17_15800001 chr3L_15800001 RAL-850 2115 chr3L 15832215 15832275 chr3L 15832346 15832406 26 130 10.5 12.0 11.2 2.1 191 chr3L 15832215 intergenic dbo +,CG12713 + chr3L 15832310 intergenic CG12713 +,dbo + chr3L 15832406 intergenic CG12713 +,dbo + chr3L_26_15830001 chr3L_15830001 RAL-850 2116 chr3L 15840385 15840467 chr3L 15840523 15840595 19 136 5.5 7.0 6.2 2.6 210 chr3L 15840385 intron CG32150 - chr3L 15840490 intron CG32150 - chr3L 15840595 intron CG32150 - chr3L_19_15840001 chr3L_15840001 RAL-850 2117 chr3L 15871545 15871615 chr3L 15871679 15871742 15 132 7.0 0.0 3.5 3.3 197 chr3L 15871545 intron pHCl - chr3L 15871644 intron pHCl - chr3L 15871742 intron pHCl - chr3L_15_15870001 chr3L_15870001 RAL-850 2118 chr3L 15899212 15899246 chr3L 15899797 15899851 jockey 12 597 9.0 7.0 8.0 1.3 639 chr3L 15899212 intergenic pHCl - chr3L 15899532 intergenic not near genes chr3L 15899851 intergenic sff - chr3L_12_15895001 chr3L_15895001 RAL-850 2119 chr3L 15917159 15917231 chr3L 15918914 15918986 20 1754 5.5 5.0 5.2 3.2 1827 chr3L 15917159 intron sff - chr3L 15918072 intron sff - chr3L 15918986 intron sff - chr3L_20_15915001 chr3L_15915001 RAL-850 2120 chr3L 15929149 15929218 chr3L 15938346 15938415 roo 31 9197 9.0 5.5 7.2 3.8 9266 chr3L 15929149 intron Pka-C3 - chr3L 15933782 intron Pka-C3 - chr3L 15938415 intron Pka-C3 - chr3L_31_15930001 chr3L_15930001 RAL-850 2121 chr3L 15946461 15946537 chr3L 15946597 15946673 14 136 9.0 1.0 5.0 2.3 212 chr3L 15946461 intron Pka-C3 - chr3L 15946567 intron Pka-C3 - chr3L 15946673 intron Pka-C3 - chr3L_14_15945001 chr3L_15945001 RAL-850 2122 chr3L 15948704 15948716 chr3L 15948837 15948849 4 133 12.0 10.5 11.2 0.3 145 chr3L 15948704 intron Pka-C3 - chr3L 15948776 intron Pka-C3 - chr3L 15948849 intron Pka-C3 - chr3L_4_15945001 chr3L_15945001 RAL-850 2123 chr3L 15948719 15948728 chr3L 15948835 15948838 6 123 11.5 10.0 10.8 0.5 119 chr3L 15948719 intron Pka-C3 - chr3L 15948778 intron Pka-C3 - chr3L 15948838 intron Pka-C3 - chr3L_6_15945001 chr3L_15945001 RAL-850 2124 chr3L 15948731 15948774 chr3L 15948828 15948859 18 122 6.0 9.5 7.8 2.0 128 chr3L 15948731 intron Pka-C3 - chr3L 15948795 intron Pka-C3 - chr3L 15948859 intron Pka-C3 - chr3L_18_15945001 chr3L_15945001 RAL-850 2125 chr3L 15956223 15956290 chr3L 15956357 15956424 36 133 7.0 7.0 7.0 4.5 201 chr3L 15956223 3` UTR GXIVsPLA2 + chr3L 15956324 3` UTR GXIVsPLA2 + chr3L 15956424 3` UTR GXIVsPLA2 + chr3L_36_15955001 chr3L_15955001 RAL-850 2126 chr3L 15989186 15989226 chr3L 15989319 15989358 18 132 7.0 7.0 7.0 2.2 172 chr3L 15989186 exon Hip14 + chr3L 15989272 intron Hip14 + chr3L 15989358 intron Hip14 + chr3L_18_15985001 chr3L_15985001 RAL-850 2127 chr3L 16047749 16047769 chr3L 16047878 16047898 8 129 0.0 14.5 7.2 1.0 149 chr3L 16047749 intron th - chr3L 16047824 intron th - chr3L 16047898 intron th - chr3L_8_16045001 chr3L_16045001 RAL-850 2128 chr3L 16070692 16070758 chr3L 16070819 16070885 16 125 9.5 10.5 10.0 1.5 193 chr3L 16070692 intron Mbs + chr3L 16070788 intron Mbs + chr3L 16070885 exon Mbs + chr3L_16_16070001 chr3L_16070001 RAL-850 2129 chr3L 16072606 16072676 chr3L 16072794 16072854 33 187 5.5 4.5 5.0 5.5 248 chr3L 16072606 intron Mbs + chr3L 16072730 intron Mbs + chr3L 16072854 intron Mbs + chr3L_33_16070001 chr3L_16070001 RAL-850 2130 chr3L 16158754 16158831 chr3L 16158888 16158966 21 135 2.0 6.0 4.0 4.2 212 chr3L 16158754 intron CG5151 - chr3L 16158860 intron CG5151 - chr3L 16158966 intron CG5151 - chr3L_21_16155001 chr3L_16155001 RAL-850 2131 chr3L 16194312 16194360 chr3L 16194422 16194454 15 114 8.0 9.5 8.8 1.5 142 chr3L 16194312 intergenic not near genes chr3L 16194383 intergenic not near genes chr3L 16194454 intergenic not near genes chr3L_15_16190001 chr3L_16190001 RAL-850 2132 chr3L 16218342 16218353 chr3L 16218591 16218602 5 249 16.5 11.0 13.8 0.3 260 chr3L 16218342 intergenic not near genes chr3L 16218472 intergenic not near genes chr3L 16218602 intergenic not near genes chr3L_5_16215001 chr3L_16215001 RAL-850 2133 chr3L 16218355 16218413 chr3L 16218589 16218662 23 248 4.0 11.0 7.5 2.7 307 chr3L 16218355 intergenic not near genes chr3L 16218508 intergenic not near genes chr3L 16218662 intergenic not near genes chr3L_23_16215001 chr3L_16215001 RAL-850 2134 chr3L 16220469 16220518 chr3L 16220604 16220653 9 135 4.5 14.0 9.2 0.9 184 chr3L 16220469 intergenic not near genes chr3L 16220561 intergenic not near genes chr3L 16220653 intergenic not near genes chr3L_9_16220001 chr3L_16220001 RAL-850 2135 chr3L 16240711 16240773 chr3L 16240893 16240948 9 181 0.0 6.0 3.0 2.2 237 chr3L 16240711 intergenic not near genes chr3L 16240830 intergenic not near genes chr3L 16240948 intergenic not near genes chr3L_9_16240001 chr3L_16240001 RAL-850 2136 chr3L 16281479 16281482 chr3L 16281573 16281620 6 114 13.0 7.5 10.2 0.5 141 chr3L 16281479 exon CG13049 - chr3L 16281550 exon CG13049 - chr3L 16281620 exon CG13049 - chr3L_6_16280001 chr3L_16280001 RAL-850 2137 chr3L 16322773 16322854 chr3L 16322913 16322988 38 138 7.0 5.5 6.2 5.3 215 chr3L 16322773 intergenic not near genes chr3L 16322880 intergenic not near genes chr3L 16322988 intergenic not near genes chr3L_38_16320001 chr3L_16320001 RAL-850 2138 chr3L 16437037 16437103 chr3L 16437173 16437239 14 136 7.5 8.5 8.0 1.6 202 chr3L 16437037 intron,intron CG33158 +,dsx-c73A - chr3L 16437138 intron,intron CG33158 +,dsx-c73A - chr3L 16437239 intron,intron CG33158 +,dsx-c73A - chr3L_14_16435001 chr3L_16435001 RAL-850 2139 chr3L 16443799 16443876 chr3L 16446189 16446266 Doc 36 2390 8.5 12.0 10.2 3.2 2467 chr3L 16443799 intron,intron CG33158 +,dsx-c73A - chr3L 16445032 intron,intron CG33158 +,dsx-c73A - chr3L 16446266 intron,intron CG33158 +,dsx-c73A - chr3L_36_16445001 chr3L_16445001 RAL-850 2140 chr3L 16452957 16453016 chr3L 16453084 16453143 9 127 5.0 0.0 2.5 2.6 186 chr3L 16452957 intron CG33158 + chr3L 16453050 intron CG33158 + chr3L 16453143 intron CG33158 + chr3L_9_16450001 chr3L_16450001 RAL-850 2141 chr3L 16457480 16457555 chr3L 16457626 16457700 22 145 6.0 6.0 6.0 3.1 220 chr3L 16457480 intron CG33158 + chr3L 16457590 intron CG33158 + chr3L 16457700 intron CG33158 + chr3L_22_16455001 chr3L_16455001 RAL-850 2142 chr3L 16493937 16494002 chr3L 16494504 16494564 jockey 35 566 12.5 16.0 14.2 2.3 627 chr3L 16493937 intron,exon,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494250 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494564 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_35_16490001 chr3L_16490001 RAL-850 2143 chr3L 16509352 16509418 chr3L 16509553 16509619 26 201 6.5 9.0 7.8 3.0 267 chr3L 16509352 intron CG43373 - chr3L 16509486 intron CG43373 - chr3L 16509619 intron CG43373 - chr3L_26_16505001 chr3L_16505001 RAL-850 2144 chr3L 16515281 16515343 chr3L 16515415 16515477 14 134 4.5 5.5 5.0 2.3 196 chr3L 16515281 intron CG43373 - chr3L 16515379 intron CG43373 - chr3L 16515477 intron CG43373 - chr3L_14_16515001 chr3L_16515001 RAL-850 2145 chr3L 16533520 16533585 chr3L 16533681 16533746 13 161 0.0 9.0 4.5 2.4 226 chr3L 16533520 intron CG43373 - chr3L 16533633 intron CG43373 - chr3L 16533746 intron CG43373 - chr3L_13_16530001 chr3L_16530001 RAL-850 2146 chr3L 16536336 16536373 chr3L 16536450 16536515 17 129 8.0 11.0 9.5 1.6 179 chr3L 16536336 intron CG43373 - chr3L 16536426 intron CG43373 - chr3L 16536515 intron CG43373 - chr3L_17_16535001 chr3L_16535001 RAL-850 2147 chr3L 16536375 16536377 chr3L 16536449 16536503 4 121 7.0 11.0 9.0 0.4 128 chr3L 16536375 intron CG43373 - chr3L 16536439 intron CG43373 - chr3L 16536503 intron CG43373 - chr3L_4_16535001 chr3L_16535001 RAL-850 2148 chr3L 16610643 16610710 chr3L 16610778 16610845 28 135 4.5 7.0 5.8 4.1 202 chr3L 16610643 intergenic Su(P) -,Prosbeta6 - chr3L 16610744 exon Su(P) - chr3L 16610845 intron Su(P) - chr3L_28_16610001 chr3L_16610001 RAL-850 2149 chr3L 16616468 16616536 chr3L 16621846 16621914 297 14 5376 6.0 8.0 7.0 1.8 5446 chr3L 16616468 3` UTR Abl - chr3L 16619191 3` UTR Abl - chr3L 16621914 3` UTR Abl - chr3L_14_16615001 chr3L_16615001 RAL-850 2150 chr3L 16632195 16632259 chr3L 16632416 16632500 18 228 7.0 1.5 4.2 3.5 305 chr3L 16632195 intron Abl - chr3L 16632348 intron Abl - chr3L 16632500 intron Abl - chr3L_18_16630001 chr3L_16630001 RAL-850 2151 chr3L 16638728 16638789 chr3L 16638854 16638919 18 130 6.0 3.0 4.5 3.3 191 chr3L 16638728 intron Abl - chr3L 16638824 intron Abl - chr3L 16638919 intron Abl - chr3L_18_16635001 chr3L_16635001 RAL-850 2152 chr3L 16684002 16684038 chr3L 16689273 16689309 copia 5 5271 2.5 13.5 8.0 0.6 5307 chr3L 16684002 intron,intron Lasp -,CG43954 - chr3L 16686656 intron,intron Lasp -,CG43954 - chr3L 16689309 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_5_16685001 chr3L_16685001 RAL-850 2153 chr3L 16690129 16690165 chr3L 16690260 16690296 14 128 14.0 18.0 16.0 0.8 167 chr3L 16690129 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L 16690212 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L 16690296 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L_14_16690001 chr3L_16690001 RAL-850 2154 chr3L 16760794 16760870 chr3L 16760984 16761057 22 187 5.0 9.0 7.0 2.8 263 chr3L 16760794 intergenic not near genes chr3L 16760926 intergenic not near genes chr3L 16761057 intergenic not near genes chr3L_22_16760001 chr3L_16760001 RAL-850 2155 chr3L 16807999 16808071 chr3L 16808125 16808200 19 127 4.5 4.5 4.5 3.5 201 chr3L 16807999 intron nudC + chr3L 16808100 intron nudC + chr3L 16808200 intron nudC + chr3L_19_16805001 chr3L_16805001 RAL-850 2156 chr3L 16818702 16818773 chr3L 16818828 16818899 39 125 9.0 8.5 8.8 4.0 197 chr3L 16818702 intron,intron nudC +,CG13024 - chr3L 16818800 intron,intron nudC +,CG13024 - chr3L 16818899 intron,intron nudC +,CG13024 - chr3L_39_16815001 chr3L_16815001 RAL-850 2157 chr3L 16844974 16845036 chr3L 16845137 16845199 19 162 13.5 9.0 11.2 1.6 225 chr3L 16844974 5` UTR CG9669 - chr3L 16845086 intergenic CG9669 -,CG9715 + chr3L 16845199 intergenic CG9715 +,CG9669 - chr3L_19_16845001 chr3L_16845001 RAL-850 2158 chr3L 16860980 16861052 chr3L 16861130 16861204 35 151 6.5 12.0 9.2 3.4 224 chr3L 16860980 intron,exon Rh4 -,CG13029 + chr3L 16861092 intron,intron Rh4 -,CG13029 + chr3L 16861204 intron,exon Rh4 -,CG13029 + chr3L_35_16860001 chr3L_16860001 RAL-850 2159 chr3L 16866168 16866189 chr3L 16866309 16866330 4 141 14.0 5.0 9.5 0.4 162 chr3L 16866168 intron Lmpt + chr3L 16866249 intron Lmpt + chr3L 16866330 intron Lmpt + chr3L_4_16865001 chr3L_16865001 RAL-850 2160 chr3L 16866206 16866230 chr3L 16866346 16866370 9 140 6.5 12.0 9.2 0.9 164 chr3L 16866206 intron Lmpt + chr3L 16866288 intron Lmpt + chr3L 16866370 intron Lmpt + chr3L_9_16865001 chr3L_16865001 RAL-850 2161 chr3L 16869538 16869584 chr3L 16869671 16869717 19 132 8.0 10.5 9.2 1.9 179 chr3L 16869538 intron Lmpt + chr3L 16869628 intron Lmpt + chr3L 16869717 intron Lmpt + chr3L_19_16865001 chr3L_16865001 RAL-850 2162 chr3L 16869586 16869605 chr3L 16869660 16869738 11 127 4.0 7.0 5.5 1.7 152 chr3L 16869586 intron Lmpt + chr3L 16869662 intron Lmpt + chr3L 16869738 intron Lmpt + chr3L_11_16865001 chr3L_16865001 RAL-850 2163 chr3L 16882270 16882303 chr3L 16882408 16882433 6 136 7.5 14.5 11.0 0.5 163 chr3L 16882270 intron Lmpt + chr3L 16882352 intron Lmpt + chr3L 16882433 intron Lmpt + chr3L_6_16880001 chr3L_16880001 RAL-850 2164 chr3L 16945695 16945745 chr3L 16954887 16954912 roo 15 9194 18.0 12.0 15.0 0.9 9217 chr3L 16945695 exon Obp73a + chr3L 16950304 intergenic not near genes chr3L 16954912 5` UTR Nc73EF + chr3L_15_16950001 chr3L_16950001 RAL-850 2165 chr3L 16945747 16945753 chr3L 16954882 16954950 roo 7 9176 16.0 9.5 12.8 0.5 9203 chr3L 16945747 exon Obp73a + chr3L 16950348 intergenic not near genes chr3L 16954950 5` UTR Nc73EF + chr3L_7_16950001 chr3L_16950001 RAL-850 2166 chr3L 17026742 17026819 chr3L 17026872 17026950 38 129 19.5 8.5 14.0 2.5 208 chr3L 17026742 exon Fit2 + chr3L 17026846 3` UTR Fit2 + chr3L 17026950 3` UTR Fit2 + chr3L_38_17025001 chr3L_17025001 RAL-850 2167 chr3L 17027127 17027189 chr3L 17027268 17027331 13 142 5.0 5.0 5.0 2.2 204 chr3L 17027127 intergenic Fit2 +,CG7730 + chr3L 17027229 intergenic Fit2 +,CG7730 + chr3L 17027331 intergenic CG7730 +,Fit2 + chr3L_13_17025001 chr3L_17025001 RAL-850 2168 chr3L 17034888 17034951 chr3L 17035121 17035189 G2 11 237 6.5 8.5 7.5 1.3 301 chr3L 17034888 intergenic not near genes chr3L 17035038 intergenic not near genes chr3L 17035189 intergenic beg + chr3L_11_17035001 chr3L_17035001 RAL-850 2169 chr3L 17071848 17071917 chr3L 17071978 17072047 19 128 7.0 11.5 9.2 1.9 199 chr3L 17071848 intron Rbp6 - chr3L 17071948 intron Rbp6 - chr3L 17072047 intron Rbp6 - chr3L_19_17070001 chr3L_17070001 RAL-850 2170 chr3L 17084960 17085029 chr3L 17094158 17094228 roo 24 9199 9.0 10.0 9.5 2.3 9268 chr3L 17084960 intron Rbp6 - chr3L 17089594 intron Rbp6 - chr3L 17094228 intron Rbp6 - chr3L_24_17085001 chr3L_17085001 RAL-850 2171 chr3L 17117122 17117128 chr3L 17117245 17117252 8 132 1.5 21.5 11.5 0.6 130 chr3L 17117122 intron Rbp6 - chr3L 17117187 intron Rbp6 - chr3L 17117252 intron Rbp6 - chr3L_8_17115001 chr3L_17115001 RAL-850 2172 chr3L 17149120 17149134 chr3L 17149249 17149265 8 131 23.5 0.5 12.0 0.6 145 chr3L 17149120 intron Rbp6 - chr3L 17149192 intron Rbp6 - chr3L 17149265 intron Rbp6 - chr3L_8_17145001 chr3L_17145001 RAL-850 2173 chr3L 17183421 17183477 chr3L 17183548 17183604 6 127 0.5 9.0 4.8 1.0 183 chr3L 17183421 intron Rbp6 - chr3L 17183512 intron Rbp6 - chr3L 17183604 intron Rbp6 - chr3L_6_17180001 chr3L_17180001 RAL-850 2174 chr3L 17272217 17272251 chr3L 17272373 17272434 8 179 11.5 10.5 11.0 0.7 217 chr3L 17272217 intergenic not near genes chr3L 17272326 intergenic not near genes chr3L 17272434 intergenic not near genes chr3L_8_17270001 chr3L_17270001 RAL-850 2175 chr3L 17317077 17317119 chr3L 17317422 17317464 11 345 2.5 9.0 5.8 1.6 387 chr3L 17317077 intergenic not near genes chr3L 17317270 intergenic not near genes chr3L 17317464 intergenic not near genes chr3L_11_17315001 chr3L_17315001 RAL-850 2176 chr3L 17408867 17408928 chr3L 17408993 17409054 14 126 8.5 6.5 7.5 1.6 187 chr3L 17408867 intron blot - chr3L 17408960 intron blot - chr3L 17409054 intron blot - chr3L_14_17405001 chr3L_17405001 RAL-850 2177 chr3L 17461978 17461990 chr3L 17462173 17462185 11 195 7.0 7.0 7.0 1.4 207 chr3L 17461978 intergenic not near genes chr3L 17462082 intergenic not near genes chr3L 17462185 intergenic not near genes chr3L_11_17460001 chr3L_17460001 RAL-850 2178 chr3L 17510693 17510760 chr3L 17510818 17510894 22 133 9.5 11.5 10.5 1.9 201 chr3L 17510693 exon Oatp74D + chr3L 17510794 intron Oatp74D + chr3L 17510894 intron Oatp74D + chr3L_22_17510001 chr3L_17510001 RAL-850 2179 chr3L 17516933 17517007 chr3L 17524540 17524589 412 31 7605 8.0 8.5 8.2 3.4 7656 chr3L 17516933 intron CG7564 + chr3L 17520761 intron CG7564 + chr3L 17524589 3` UTR CG7564 + chr3L_31_17520001 chr3L_17520001 RAL-850 2180 chr3L 17585330 17585381 chr3L 17585606 17585672 21 277 40.5 53.0 46.8 0.4 342 chr3L 17585330 intron Eip74EF - chr3L 17585501 intron Eip74EF - chr3L 17585672 intron Eip74EF - chr3L_21_17585001 chr3L_17585001 RAL-850 2181 chr3L 17592745 17592809 chr3L 17592886 17592950 20 141 9.5 12.0 10.8 1.7 205 chr3L 17592745 intron Eip74EF - chr3L 17592848 intron Eip74EF - chr3L 17592950 intron Eip74EF - chr3L_20_17590001 chr3L_17590001 RAL-850 2182 chr3L 17644540 17644616 chr3L 17644666 17644730 20 123 8.0 10.0 9.0 2.0 190 chr3L 17644540 intron Pep - chr3L 17644635 intron Pep - chr3L 17644730 intron Pep - chr3L_20_17640001 chr3L_17640001 RAL-850 2183 chr3L 17659680 17659746 chr3L 17659807 17659870 17 127 12.0 8.0 10.0 1.5 190 chr3L 17659680 intergenic Crtc - chr3L 17659775 intergenic Crtc - chr3L 17659870 3` UTR Crtc - chr3L_17_17655001 chr3L_17655001 RAL-850 2184 chr3L 17675764 17675833 chr3L 17676243 17676296 15 474 7.0 8.5 7.8 1.7 532 chr3L 17675764 intron CG34251 + chr3L 17676030 intron CG34251 + chr3L 17676296 intron CG34251 + chr3L_15_17675001 chr3L_17675001 RAL-850 2185 chr3L 17702309 17702379 chr3L 17702443 17702512 7 134 3.0 6.0 4.5 1.3 203 chr3L 17702309 intron Ccn + chr3L 17702410 intron Ccn + chr3L 17702512 intron Ccn + chr3L_7_17700001 chr3L_17700001 RAL-850 2186 chr3L 17702970 17703007 chr3L 17703108 17703145 7 138 4.5 8.0 6.2 1.0 175 chr3L 17702970 intron Ccn + chr3L 17703058 intron Ccn + chr3L 17703145 intron Ccn + chr3L_7_17700001 chr3L_17700001 RAL-850 2187 chr3L 17730803 17730873 chr3L 17738184 17738253 mdg1 15 7381 5.5 11.0 8.2 1.6 7450 chr3L 17730803 intron Ccn + chr3L 17734528 intron Ccn + chr3L 17738253 intron Ccn + chr3L_15_17730001 chr3L_17730001 RAL-850 2188 chr3L 17743379 17743393 chr3L 17743512 17743526 4 133 22.0 16.0 19.0 0.2 147 chr3L 17743379 intron Ccn + chr3L 17743452 intron Ccn + chr3L 17743526 intron Ccn + chr3L_4_17740001 chr3L_17740001 RAL-850 2189 chr3L 17743395 17743434 chr3L 17743506 17743562 16 125 13.5 14.5 14.0 1.1 167 chr3L 17743395 intron Ccn + chr3L 17743478 intron Ccn + chr3L 17743562 intron Ccn + chr3L_16_17740001 chr3L_17740001 RAL-850 2190 chr3L 17744935 17744970 chr3L 17745080 17745099 14 143 14.0 0.0 7.0 1.8 164 chr3L 17744935 intron Ccn + chr3L 17745017 intron Ccn + chr3L 17745099 intron Ccn + chr3L_14_17745001 chr3L_17745001 RAL-850 2191 chr3L 17773174 17773238 chr3L 17773310 17773339 26 144 9.5 9.0 9.2 2.5 165 chr3L 17773174 intergenic not near genes chr3L 17773256 intergenic not near genes chr3L 17773339 intergenic not near genes chr3L_26_17770001 chr3L_17770001 RAL-850 2192 chr3L 17777996 17778053 chr3L 17778176 17778233 16 180 6.0 7.5 6.8 2.1 237 chr3L 17777996 intergenic not near genes chr3L 17778114 intergenic not near genes chr3L 17778233 intergenic not near genes chr3L_16_17775001 chr3L_17775001 RAL-850 2193 chr3L 17782306 17782373 chr3L 17782632 17782699 26 325 7.5 7.0 7.2 3.2 393 chr3L 17782306 intergenic not near genes chr3L 17782502 intergenic not near genes chr3L 17782699 intergenic not near genes chr3L_26_17780001 chr3L_17780001 RAL-850 2194 chr3L 17789801 17789866 chr3L 17789927 17789992 10 126 5.5 7.5 6.5 1.3 191 chr3L 17789801 intergenic not near genes chr3L 17789896 intergenic not near genes chr3L 17789992 intergenic not near genes chr3L_10_17785001 chr3L_17785001 RAL-850 2195 chr3L 17790148 17790220 chr3L 17790311 17790387 24 164 9.0 4.5 6.8 3.1 239 chr3L 17790148 intergenic not near genes chr3L 17790268 intergenic not near genes chr3L 17790387 intergenic not near genes chr3L_24_17790001 chr3L_17790001 RAL-850 2196 chr3L 17790581 17790635 chr3L 17790896 17790950 17 314 8.0 10.5 9.2 1.7 369 chr3L 17790581 intergenic CG42815 - chr3L 17790766 intergenic CG42815 - chr3L 17790950 intergenic CG42815 - chr3L_17_17790001 chr3L_17790001 RAL-850 2197 chr3L 17799518 17799584 chr3L 17799649 17799715 31 129 4.0 6.0 5.0 5.2 197 chr3L 17799518 exon NUCB1 - chr3L 17799616 intron NUCB1 - chr3L 17799715 intron NUCB1 - chr3L_31_17795001 chr3L_17795001 RAL-850 2198 chr3L 17799765 17799835 chr3L 17801602 17801669 S-element 24 1836 9.0 10.0 9.5 2.3 1904 chr3L 17799765 intron NUCB1 - chr3L 17800717 intron NUCB1 - chr3L 17801669 intron NUCB1 - chr3L_24_17800001 chr3L_17800001 RAL-850 2199 chr3L 17827243 17827308 chr3L 17827384 17827449 24 141 10.5 12.5 11.5 1.9 206 chr3L 17827243 intron Grd + chr3L 17827346 intron Grd + chr3L 17827449 intron Grd + chr3L_24_17825001 chr3L_17825001 RAL-850 2200 chr3L 17884644 17884710 chr3L 17884794 17884859 20 150 4.5 0.0 2.2 6.2 215 chr3L 17884644 intergenic CG5506 - chr3L 17884752 intergenic CG5506 - chr3L 17884859 intergenic CG5506 - chr3L_20_17880001 chr3L_17880001 RAL-850 2201 chr3L 17906530 17906604 chr3L 17906681 17906755 28 151 10.5 6.0 8.2 3.0 225 chr3L 17906530 intron Prestin - chr3L 17906642 intron Prestin - chr3L 17906755 intron Prestin - chr3L_28_17905001 chr3L_17905001 RAL-850 2202 chr3L 17917600 17917636 chr3L 17917940 17917976 16 339 0.0 16.0 8.0 1.8 376 chr3L 17917600 intergenic not near genes chr3L 17917788 intergenic not near genes chr3L 17917976 intergenic not near genes chr3L_16_17915001 chr3L_17915001 RAL-850 2203 chr3L 17918335 17918390 chr3L 17921188 17921243 opus 15 2853 2.0 8.5 5.2 2.4 2908 chr3L 17918335 intergenic not near genes chr3L 17919789 intergenic not near genes chr3L 17921243 intergenic not near genes chr3L_15_17915001 chr3L_17915001 RAL-850 2204 chr3L 17941362 17941416 chr3L 17941632 17941686 7 269 26.5 33.0 29.8 0.2 324 chr3L 17941362 intron CG43174 + chr3L 17941524 intron CG43174 + chr3L 17941686 intron CG43174 + chr3L_7_17940001 chr3L_17940001 RAL-850 2205 chr3L 17953458 17953516 chr3L 17953597 17953615 10 132 5.5 7.5 6.5 1.3 157 chr3L 17953458 3` UTR Eip75B - chr3L 17953536 3` UTR Eip75B - chr3L 17953615 3` UTR Eip75B - chr3L_10_17950001 chr3L_17950001 RAL-850 2206 chr3L 17983480 17983548 chr3L 17983629 17983697 17 149 6.0 4.0 5.0 2.8 217 chr3L 17983480 intron Eip75B - chr3L 17983588 intron Eip75B - chr3L 17983697 intron Eip75B - chr3L_17_17980001 chr3L_17980001 RAL-850 2207 chr3L 17991520 17991582 chr3L 17991648 17991710 23 128 10.0 11.0 10.5 2.0 190 chr3L 17991520 intron Eip75B - chr3L 17991615 intron Eip75B - chr3L 17991710 intron Eip75B - chr3L_23_17990001 chr3L_17990001 RAL-850 2208 chr3L 18020513 18020580 chr3L 18020669 18020736 16 155 7.0 1.0 4.0 3.2 223 chr3L 18020513 intron Eip75B - chr3L 18020624 intron Eip75B - chr3L 18020736 intron Eip75B - chr3L_16_18020001 chr3L_18020001 RAL-850 2209 chr3L 18021309 18021382 chr3L 18021451 18021524 33 138 6.5 9.5 8.0 3.7 215 chr3L 18021309 intron Eip75B - chr3L 18021416 intron Eip75B - chr3L 18021524 intron Eip75B - chr3L_33_18020001 chr3L_18020001 RAL-850 2210 chr3L 18029907 18029940 chr3L 18030034 18030067 9 127 16.0 0.5 8.2 1.0 160 chr3L 18029907 intron Eip75B - chr3L 18029987 intron Eip75B - chr3L 18030067 intron Eip75B - chr3L_9_18025001 chr3L_18025001 RAL-850 2211 chr3L 18042204 18042460 chr3L 18042332 18042588 25 127 0.0 3.0 1.5 10.0 384 chr3L 18042204 intron Eip75B - chr3L 18042396 intron Eip75B - chr3L 18042588 intron Eip75B - chr3L_25_18040001 chr3L_18040001 RAL-850 2212 chr3L 18042508 18042512 chr3L 18042636 18042640 4 128 0.0 10.5 5.2 0.6 132 chr3L 18042508 intron Eip75B - chr3L 18042574 intron Eip75B - chr3L 18042640 intron Eip75B - chr3L_4_18040001 chr3L_18040001 RAL-850 2213 chr3L 18047666 18047729 chr3L 18056772 18056835 roo 26 9106 7.0 7.0 7.0 3.2 9169 chr3L 18047666 intron Eip75B - chr3L 18052250 intron Eip75B - chr3L 18056835 intron Eip75B - chr3L_26_18050001 chr3L_18050001 RAL-850 2214 chr3L 18057925 18058007 chr3L 18058076 18058157 25 148 7.0 7.5 7.2 3.0 232 chr3L 18057925 intron Eip75B - chr3L 18058041 intron Eip75B - chr3L 18058157 intron Eip75B - chr3L_25_18055001 chr3L_18055001 RAL-850 2215 chr3L 18118172 18118238 chr3L 18118300 18118366 28 127 3.5 1.0 2.2 8.8 194 chr3L 18118172 3` UTR,intron CG32195 +,CG7341 + chr3L 18118269 3` UTR,intron CG32195 +,CG7341 + chr3L 18118366 3` UTR,intron CG32195 +,CG7341 + chr3L_28_18115001 chr3L_18115001 RAL-850 2216 chr3L 18119592 18119671 chr3L 18119754 18119819 18 158 0.0 10.5 5.2 2.9 227 chr3L 18119592 intron CG7341 + chr3L 18119706 intron CG7341 + chr3L 18119819 exon CG7341 + chr3L_18_18115001 chr3L_18115001 RAL-850 2217 chr3L 18132986 18133018 chr3L 18133124 18133143 12 139 9.0 0.0 4.5 2.2 157 chr3L 18132986 intergenic Cyp312a1 - chr3L 18133064 intergenic Cyp312a1 - chr3L 18133143 intergenic Cyp312a1 - chr3L_12_18130001 chr3L_18130001 RAL-850 2218 chr3L 18133022 18133029 chr3L 18133122 18133168 4 130 7.0 0.0 3.5 0.9 146 chr3L 18133022 intergenic Cyp312a1 - chr3L 18133095 intergenic Cyp312a1 - chr3L 18133168 intergenic Cyp312a1 - chr3L_4_18130001 chr3L_18130001 RAL-850 2219 chr3L 18154034 18154108 chr3L 18154168 18154211 26 126 5.0 8.0 6.5 3.5 177 chr3L 18154034 intergenic CG7330 + chr3L 18154122 intergenic CG7330 + chr3L 18154211 intergenic CG7330 + chr3L_26_18150001 chr3L_18150001 RAL-850 2220 chr3L 18172642 18172703 chr3L 18172768 18172829 28 126 12.5 8.5 10.5 2.4 187 chr3L 18172642 intron W - chr3L 18172736 intron W - chr3L 18172829 intron W - chr3L_28_18170001 chr3L_18170001 RAL-850 2221 chr3L 18186584 18186617 chr3L 18186773 18186806 17 189 15.0 7.5 11.2 1.4 222 chr3L 18186584 intergenic not near genes chr3L 18186695 intergenic not near genes chr3L 18186806 intergenic not near genes chr3L_17_18185001 chr3L_18185001 RAL-850 2222 chr3L 18189546 18189547 chr3L 18190197 18190198 S-element 4 651 13.0 12.0 12.5 0.3 652 chr3L 18189546 intergenic not near genes chr3L 18189872 intergenic not near genes chr3L 18190198 intergenic not near genes chr3L_4_18185001 chr3L_18185001 RAL-850 2223 chr3L 18189549 18189584 chr3L 18190196 18190235 S-element 16 648 13.0 11.0 12.0 1.2 686 chr3L 18189549 intergenic not near genes chr3L 18189892 intergenic not near genes chr3L 18190235 intergenic not near genes chr3L_16_18185001 chr3L_18185001 RAL-850 2224 chr3L 18210691 18210746 chr3L 18210817 18210872 22 125 3.5 5.5 4.5 4.0 181 chr3L 18210691 intergenic not near genes chr3L 18210782 intergenic not near genes chr3L 18210872 intergenic not near genes chr3L_22_18210001 chr3L_18210001 RAL-850 2225 chr3L 18221042 18221131 chr3L 18221184 18221266 15 137 0.0 5.5 2.8 3.9 224 chr3L 18221042 intergenic not near genes chr3L 18221154 intergenic not near genes chr3L 18221266 intergenic not near genes chr3L_15_18220001 chr3L_18220001 RAL-850 2226 chr3L 18223115 18223158 chr3L 18223248 18223303 9 135 12.0 0.0 6.0 1.3 188 chr3L 18223115 intergenic not near genes chr3L 18223209 intergenic not near genes chr3L 18223303 intergenic not near genes chr3L_9_18220001 chr3L_18220001 RAL-850 2227 chr3L 18223169 18223188 chr3L 18223314 18223333 10 142 7.5 9.0 8.2 1.1 164 chr3L 18223169 intergenic not near genes chr3L 18223251 intergenic not near genes chr3L 18223333 intergenic not near genes chr3L_10_18220001 chr3L_18220001 RAL-850 2228 chr3L 18247757 18247773 chr3L 18247900 18247916 7 143 4.5 7.0 5.8 1.0 159 chr3L 18247757 intergenic not near genes chr3L 18247836 intergenic not near genes chr3L 18247916 intergenic not near genes chr3L_7_18245001 chr3L_18245001 RAL-850 2229 chr3L 18251707 18251776 chr3L 18251850 18251919 27 143 9.0 5.5 7.2 3.3 212 chr3L 18251707 intergenic CheA75a + chr3L 18251813 intergenic CheA75a + chr3L 18251919 intergenic CheA75a + chr3L_27_18250001 chr3L_18250001 RAL-850 2230 chr3L 18448568 18448620 chr3L 18448710 18448762 20 142 4.5 4.0 4.2 3.8 194 chr3L 18448568 intergenic not near genes chr3L 18448665 intergenic not near genes chr3L 18448762 intergenic not near genes chr3L_20_18445001 chr3L_18445001 RAL-850 2231 chr3L 18464452 18464515 chr3L 18464572 18464650 22 126 7.0 11.5 9.2 2.2 198 chr3L 18464452 intergenic not near genes chr3L 18464551 intergenic not near genes chr3L 18464650 intergenic not near genes chr3L_22_18460001 chr3L_18460001 RAL-850 2232 chr3L 18479220 18479263 chr3L 18479348 18479390 7 128 7.5 8.5 8.0 0.8 170 chr3L 18479220 5` UTR CR44673 + chr3L 18479305 intergenic CR44673 + chr3L 18479390 intergenic CR44673 + chr3L_7_18475001 chr3L_18475001 RAL-850 2233 chr3L 18506095 18506150 chr3L 18509608 18509663 F-element 20 3513 6.0 7.5 6.8 2.6 3568 chr3L 18506095 intergenic not near genes chr3L 18507879 intergenic not near genes chr3L 18509663 intergenic not near genes chr3L_20_18505001 chr3L_18505001 RAL-850 2234 chr3L 18528592 18528650 chr3L 18537803 18537861 roo 19 9211 8.0 8.0 8.0 2.1 9269 chr3L 18528592 intergenic not near genes chr3L 18533226 intergenic not near genes chr3L 18537861 intergenic not near genes chr3L_19_18530001 chr3L_18530001 RAL-850 2235 chr3L 18546659 18546677 chr3L 18546803 18546821 11 144 22.5 6.0 14.2 0.7 162 chr3L 18546659 intergenic not near genes chr3L 18546740 intergenic not near genes chr3L 18546821 intergenic not near genes chr3L_11_18545001 chr3L_18545001 RAL-850 2236 chr3L 18546681 18546730 chr3L 18546799 18546874 12 140 8.0 5.5 6.8 1.5 193 chr3L 18546681 intergenic not near genes chr3L 18546778 intergenic not near genes chr3L 18546874 intergenic not near genes chr3L_12_18545001 chr3L_18545001 RAL-850 2237 chr3L 18566978 18567053 chr3L 18567114 18567189 29 133 5.5 9.0 7.2 3.5 211 chr3L 18566978 intron AstC-R1 + chr3L 18567084 intron AstC-R1 + chr3L 18567189 intron AstC-R1 + chr3L_29_18565001 chr3L_18565001 RAL-850 2238 chr3L 18579519 18579596 chr3L 18579697 18579768 32 176 7.0 8.0 7.5 3.8 249 chr3L 18579519 intergenic not near genes chr3L 18579644 intergenic not near genes chr3L 18579768 intergenic not near genes chr3L_32_18575001 chr3L_18575001 RAL-850 2239 chr3L 18593903 18593976 chr3L 18595933 18596009 Doc 18 2030 6.0 4.0 5.0 3.0 2106 chr3L 18593903 intergenic term - chr3L 18594956 intergenic not near genes chr3L 18596009 intergenic CR45389 + chr3L_18_18590001 chr3L_18590001 RAL-850 2240 chr3L 18606704 18606734 chr3L 18606952 18606982 17 246 21.0 9.0 15.0 1.1 278 chr3L 18606704 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18606843 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18606982 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L_17_18605001 chr3L_18605001 RAL-850 2241 chr3L 18606738 18606780 chr3L 18606951 18607028 23 242 5.0 9.0 7.0 2.9 290 chr3L 18606738 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18606883 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18607028 intron,intron,intron CG13380 -,CG4174 -,CG18233 + chr3L_23_18605001 chr3L_18605001 RAL-850 2242 chr3L 18638536 18638599 chr3L 18638680 18638743 21 144 6.5 4.5 5.5 3.2 207 chr3L 18638536 intron MYPT-75D + chr3L 18638640 intron MYPT-75D + chr3L 18638743 intron MYPT-75D + chr3L_21_18635001 chr3L_18635001 RAL-850 2243 chr3L 18710745 18710786 chr3L 18718745 18718786 Stalker2 14 8000 8.5 4.0 6.2 1.9 8041 chr3L 18710745 intergenic not near genes chr3L 18714766 intergenic not near genes chr3L 18718786 intergenic not near genes chr3L_14_18710001 chr3L_18710001 RAL-850 2244 chr3L 18721724 18721793 chr3L 18721865 18721934 11 140 9.5 6.0 7.8 1.2 210 chr3L 18721724 intergenic CG12477 - chr3L 18721829 intergenic CG12477 - chr3L 18721934 3` UTR CG12477 - chr3L_11_18720001 chr3L_18720001 RAL-850 2245 chr3L 18741948 18741973 chr3L 18742084 18742109 10 135 11.5 4.5 8.0 1.1 161 chr3L 18741948 intergenic not near genes chr3L 18742028 intergenic not near genes chr3L 18742109 intergenic not near genes chr3L_10_18740001 chr3L_18740001 RAL-850 2246 chr3L 18753499 18753556 chr3L 18753631 18753673 18 131 6.5 7.5 7.0 2.2 174 chr3L 18753499 intron ftz-f1 - chr3L 18753586 intron ftz-f1 - chr3L 18753673 intron ftz-f1 - chr3L_18_18750001 chr3L_18750001 RAL-850 2247 chr3L 18770610 18770674 chr3L 18770745 18770809 14 135 6.0 5.5 5.8 2.1 199 chr3L 18770610 intron ftz-f1 - chr3L 18770710 intron ftz-f1 - chr3L 18770809 intron ftz-f1 - chr3L_14_18770001 chr3L_18770001 RAL-850 2248 chr3L 18772365 18772429 chr3L 18781096 18781160 roo 23 8731 9.0 9.5 9.2 2.3 8795 chr3L 18772365 intron ftz-f1 - chr3L 18776762 intron ftz-f1 - chr3L 18781160 intron ftz-f1 - chr3L_23_18775001 chr3L_18775001 RAL-850 2249 chr3L 18784347 18784406 chr3L 18784486 18784545 16 139 9.0 7.5 8.2 1.7 198 chr3L 18784347 intron ftz-f1 - chr3L 18784446 intron ftz-f1 - chr3L 18784545 intron ftz-f1 - chr3L_16_18780001 chr3L_18780001 RAL-850 2250 chr3L 18797280 18797328 chr3L 18797414 18797462 19 132 4.0 10.5 7.2 2.3 182 chr3L 18797280 intron ftz-f1 - chr3L 18797371 intron ftz-f1 - chr3L 18797462 intron ftz-f1 - chr3L_19_18795001 chr3L_18795001 RAL-850 2251 chr3L 18810099 18810178 chr3L 18810226 18810310 21 132 5.5 2.0 3.8 4.4 211 chr3L 18810099 intron CG14073 - chr3L 18810204 intron CG14073 - chr3L 18810310 intron CG14073 - chr3L_21_18810001 chr3L_18810001 RAL-850 2252 chr3L 18811067 18811084 chr3L 18811204 18811221 10 137 21.5 0.0 10.8 0.8 154 chr3L 18811067 intron CG14073 - chr3L 18811144 intron CG14073 - chr3L 18811221 intron CG14073 - chr3L_10_18810001 chr3L_18810001 RAL-850 2253 chr3L 18838715 18838765 chr3L 18838863 18838914 11 149 0.0 9.0 4.5 2.0 199 chr3L 18838715 intron Indy - chr3L 18838814 intron Indy - chr3L 18838914 intron Indy - chr3L_11_18835001 chr3L_18835001 RAL-850 2254 chr3L 18843826 18843900 chr3L 18843966 18844040 28 140 4.0 14.5 9.2 2.7 214 chr3L 18843826 intron Indy - chr3L 18843933 intron Indy - chr3L 18844040 intron Indy - chr3L_28_18840001 chr3L_18840001 RAL-850 2255 chr3L 18853971 18854018 chr3L 18854122 18854169 11 151 8.0 5.0 6.5 1.5 198 chr3L 18853971 intergenic CR45387 + chr3L 18854070 intergenic CR45387 + chr3L 18854169 intergenic CR45387 + chr3L_11_18850001 chr3L_18850001 RAL-850 2256 chr3L 18863931 18863997 chr3L 18864065 18864133 4 134 1.5 0.0 0.8 2.2 202 chr3L 18863931 intron CG6865 + chr3L 18864032 intron CG6865 + chr3L 18864133 intron CG6865 + chr3L_4_18860001 chr3L_18860001 RAL-850 2257 chr3L 18868908 18868974 chr3L 18869060 18869126 23 150 6.0 6.5 6.2 3.2 218 chr3L 18868908 3` UTR Dysb + chr3L 18869017 3` UTR Dysb + chr3L 18869126 3` UTR Dysb + chr3L_23_18865001 chr3L_18865001 RAL-850 2258 chr3L 18885956 18886016 chr3L 18886082 18886142 19 126 1.5 7.5 4.5 3.5 186 chr3L 18885956 intron CG3961 - chr3L 18886049 intron CG3961 - chr3L 18886142 intron CG3961 - chr3L_19_18885001 chr3L_18885001 RAL-850 2259 chr3L 18887255 18887329 chr3L 18887411 18887485 22 156 7.0 5.0 6.0 3.1 230 chr3L 18887255 intron CG3961 - chr3L 18887370 intron CG3961 - chr3L 18887485 intron CG3961 - chr3L_22_18885001 chr3L_18885001 RAL-850 2260 chr3L 18888211 18888283 chr3L 18888346 18888418 26 134 8.0 10.5 9.2 2.5 207 chr3L 18888211 intron CG3961 - chr3L 18888314 intron CG3961 - chr3L 18888418 intron CG3961 - chr3L_26_18885001 chr3L_18885001 RAL-850 2261 chr3L 18924446 18924504 chr3L 18924557 18924630 15 124 8.0 8.0 8.0 1.7 184 chr3L 18924446 intron CG32204 - chr3L 18924538 intron CG32204 - chr3L 18924630 intron CG32204 - chr3L_15_18920001 chr3L_18920001 RAL-850 2262 chr3L 18933582 18933660 chr3L 18933726 18933803 34 143 5.5 11.5 8.5 3.6 221 chr3L 18933582 intron CG32204 - chr3L 18933692 intron CG32204 - chr3L 18933803 intron CG32204 - chr3L_34_18930001 chr3L_18930001 RAL-850 2263 chr3L 18935791 18935862 chr3L 18935930 18936001 23 139 5.5 6.5 6.0 3.3 210 chr3L 18935791 intron CG32204 - chr3L 18935896 intron CG32204 - chr3L 18936001 intron CG32204 - chr3L_23_18935001 chr3L_18935001 RAL-850 2264 chr3L 18941133 18941201 chr3L 18941294 18941362 25 161 6.5 9.0 7.8 2.8 229 chr3L 18941133 intron CG32204 - chr3L 18941248 intron CG32204 - chr3L 18941362 intron CG32204 - chr3L_25_18940001 chr3L_18940001 RAL-850 2265 chr3L 18942812 18942876 chr3L 18942975 18943039 18 159 6.0 9.0 7.5 2.1 227 chr3L 18942812 intron CG32204 - chr3L 18942926 intron CG32204 - chr3L 18943039 intron CG32204 - chr3L_18_18940001 chr3L_18940001 RAL-850 2266 chr3L 18948862 18948905 chr3L 18949138 18949181 7 274 0.0 5.0 2.5 2.0 319 chr3L 18948862 intergenic not near genes chr3L 18949022 intergenic not near genes chr3L 18949181 intergenic not near genes chr3L_7_18945001 chr3L_18945001 RAL-850 2267 chr3L 18958552 18958624 chr3L 18958678 18958750 21 126 4.5 5.5 5.0 3.5 198 chr3L 18958552 intergenic not near genes chr3L 18958651 intergenic not near genes chr3L 18958750 intergenic not near genes chr3L_21_18955001 chr3L_18955001 RAL-850 2268 chr3L 19008808 19008867 chr3L 19009186 19009255 jockey 12 381 6.0 10.0 8.0 1.3 447 chr3L 19008808 intron nkd - chr3L 19009032 intron nkd - chr3L 19009255 intron nkd - chr3L_12_19005001 chr3L_19005001 RAL-850 2269 chr3L 19029401 19029471 chr3L 19029552 19029623 28 147 12.5 10.5 11.5 2.2 222 chr3L 19029401 intron nkd - chr3L 19029512 intron nkd - chr3L 19029623 intron nkd - chr3L_28_19025001 chr3L_19025001 RAL-850 2270 chr3L 19081989 19082056 chr3L 19082141 19082208 35 149 11.0 7.5 9.2 3.4 219 chr3L 19081989 intron Mkp3 - chr3L 19082098 intron Mkp3 - chr3L 19082208 intron Mkp3 - chr3L_35_19080001 chr3L_19080001 RAL-850 2271 chr3L 19101675 19101722 chr3L 19102097 19102144 13 421 5.5 6.5 6.0 1.9 469 chr3L 19101675 intergenic not near genes chr3L 19101910 intergenic not near genes chr3L 19102144 intergenic not near genes chr3L_13_19100001 chr3L_19100001 RAL-850 2272 chr3L 19111316 19111368 chr3L 19111453 19111470 20 131 10.0 15.0 12.5 1.5 154 chr3L 19111316 intron CG14082 - chr3L 19111393 intron CG14082 - chr3L 19111470 intron CG14082 - chr3L_20_19110001 chr3L_19110001 RAL-850 2273 chr3L 19115622 19115650 chr3L 19115833 19115873 BS 11 219 16.5 12.5 14.5 0.7 251 chr3L 19115622 intron CG14082 - chr3L 19115748 intron CG14082 - chr3L 19115873 intron CG14082 - chr3L_11_19115001 chr3L_19115001 RAL-850 2274 chr3L 19115654 19115676 chr3L 19115817 19115851 BS 4 190 11.0 9.0 10.0 0.4 197 chr3L 19115654 intron CG14082 - chr3L 19115752 intron CG14082 - chr3L 19115851 intron CG14082 - chr3L_4_19115001 chr3L_19115001 RAL-850 2275 chr3L 19117004 19117067 chr3L 19124501 19124564 mdg1 27 7494 14.0 11.5 12.8 2.0 7560 chr3L 19117004 intron CG14082 - chr3L 19120784 intron CG14082 - chr3L 19124564 intron CG14082 - chr3L_27_19120001 chr3L_19120001 RAL-850 2276 chr3L 19138520 19138580 chr3L 19138643 19138711 28 128 8.5 10.0 9.2 2.7 191 chr3L 19138520 intron CG14082 - chr3L 19138616 intron CG14082 - chr3L 19138711 intron CG14082 - chr3L_28_19135001 chr3L_19135001 RAL-850 2277 chr3L 19182346 19182406 chr3L 19182471 19182535 19 130 7.0 6.0 6.5 2.5 189 chr3L 19182346 intron fz2 - chr3L 19182440 intron fz2 - chr3L 19182535 intron fz2 - chr3L_19_19180001 chr3L_19180001 RAL-850 2278 chr3L 19186396 19186423 chr3L 19186538 19186565 9 141 5.5 12.5 9.0 0.9 169 chr3L 19186396 intron fz2 - chr3L 19186480 intron fz2 - chr3L 19186565 intron fz2 - chr3L_9_19185001 chr3L_19185001 RAL-850 2279 chr3L 19208012 19208078 chr3L 19209436 19209502 Doc 18 1423 7.0 3.0 5.0 3.0 1490 chr3L 19208012 intron fz2 - chr3L 19208757 intron fz2 - chr3L 19209502 intron fz2 - chr3L_18_19205001 chr3L_19205001 RAL-850 2280 chr3L 19220633 19220634 chr3L 22908066 22908067 27 3687433 34.0 37.5 35.8 0.7 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_27_21060001 chr3L_21060001 RAL-850 2281 chr3L 19220635 19220635 chr3L 22908066 22908066 5 3687431 34.5 37.5 36.0 0.1 3687431 chr3L 19220635 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_5_21060001 chr3L_21060001 RAL-850 2282 chr3L 19220636 19220636 chr3L 22908066 22908067 4 3687430 35.0 37.5 36.2 0.1 3687431 chr3L 19220636 intron fz2 - chr3L 21064352 intron siz + chr3L 22908067 intergenic not near genes chr3L_4_21060001 chr3L_21060001 RAL-850 2283 chr3L 19220637 19220637 chr3L 22908066 22908067 9 3687429 35.0 37.5 36.2 0.2 3687430 chr3L 19220637 intron fz2 - chr3L 21064352 intron siz + chr3L 22908067 intergenic not near genes chr3L_9_21060001 chr3L_21060001 RAL-850 2284 chr3L 19238680 19238751 chr3L 19238837 19238908 36 157 5.5 4.5 5.0 6.0 228 chr3L 19238680 intergenic not near genes chr3L 19238794 intergenic not near genes chr3L 19238908 intergenic not near genes chr3L_36_19235001 chr3L_19235001 RAL-850 2285 chr3L 19244069 19244108 chr3L 19244197 19244225 14 126 17.5 10.0 13.8 0.9 156 chr3L 19244069 intergenic not near genes chr3L 19244147 intergenic not near genes chr3L 19244225 intergenic not near genes chr3L_14_19240001 chr3L_19240001 RAL-850 2286 chr3L 19244109 19244138 chr3L 19244192 19244256 13 116 9.5 8.5 9.0 1.3 147 chr3L 19244109 intergenic not near genes chr3L 19244182 intergenic not near genes chr3L 19244256 intergenic not near genes chr3L_13_19240001 chr3L_19240001 RAL-850 2287 chr3L 19262167 19262232 chr3L 19262297 19262364 10 131 0.5 6.5 3.5 2.2 197 chr3L 19262167 3` UTR Bet1 + chr3L 19262266 3` UTR,3` UTR Bet1 +,Max - chr3L 19262364 3` UTR,3` UTR Bet1 +,Max - chr3L_10_19260001 chr3L_19260001 RAL-850 2288 chr3L 19269769 19269778 chr3L 19270023 19270032 5 254 8.0 7.0 7.5 0.6 263 chr3L 19269769 intron CG14085 + chr3L 19269900 intron,exon CG14085 +,CG14088 - chr3L 19270032 intron,exon CG14085 +,CG14088 - chr3L_5_19265001 chr3L_19265001 RAL-850 2289 chr3L 19269780 19269848 chr3L 19270020 19270082 26 247 6.5 6.0 6.2 3.6 302 chr3L 19269780 intron,exon CG14085 +,CG14088 - chr3L 19269931 intron,exon CG14085 +,CG14088 - chr3L 19270082 intron,exon CG14085 +,CG14088 - chr3L_26_19265001 chr3L_19265001 RAL-850 2290 chr3L 19279638 19279661 chr3L 19279780 19279798 8 137 21.0 13.0 17.0 0.4 160 chr3L 19279638 intron CG14086 + chr3L 19279718 exon CG14086 + chr3L 19279798 exon CG14086 + chr3L_8_19275001 chr3L_19275001 RAL-850 2291 chr3L 19279662 19279705 chr3L 19279779 19279781 27 129 9.0 12.5 10.8 2.3 119 chr3L 19279662 intron CG14086 + chr3L 19279722 exon CG14086 + chr3L 19279781 exon CG14086 + chr3L_27_19275001 chr3L_19275001 RAL-850 2292 chr3L 19319588 19319643 chr3L 19319715 19319769 7 126 3.5 2.5 3.0 1.8 181 chr3L 19319588 intron pip - chr3L 19319678 intron pip - chr3L 19319769 intron pip - chr3L_7_19315001 chr3L_19315001 RAL-850 2293 chr3L 19342713 19342774 chr3L 19342854 19342915 19 141 3.5 3.5 3.5 4.2 202 chr3L 19342713 3` UTR CG32206 - chr3L 19342814 3` UTR CG32206 - chr3L 19342915 3` UTR CG32206 - chr3L_19_19340001 chr3L_19340001 RAL-850 2294 chr3L 19387568 19387637 chr3L 19387961 19388030 29 392 8.5 12.0 10.2 2.6 462 chr3L 19387568 intron CG32206 - chr3L 19387799 intron,intron CG32206 -,ms(3)76Ba + chr3L 19388030 intron,exon CG32206 -,ms(3)76Ba + chr3L_29_19385001 chr3L_19385001 RAL-850 2295 chr3L 19398888 19398931 chr3L 19403655 19403680 F-element 18 4764 7.0 12.5 9.8 1.7 4792 chr3L 19398888 intron CG32206 - chr3L 19401284 intron CG32206 - chr3L 19403680 intron CG32206 - chr3L_18_19400001 chr3L_19400001 RAL-850 2296 chr3L 19404930 19404994 chr3L 19405057 19405121 27 127 7.5 6.0 6.8 3.5 191 chr3L 19404930 intron CG32206 - chr3L 19405026 intron CG32206 - chr3L 19405121 intron CG32206 - chr3L_27_19405001 chr3L_19405001 RAL-850 2297 chr3L 19426711 19426767 chr3L 19426834 19426895 20 121 13.5 14.0 13.8 1.4 184 chr3L 19426711 intergenic not near genes chr3L 19426803 intergenic not near genes chr3L 19426895 intergenic not near genes chr3L_20_19425001 chr3L_19425001 RAL-850 2298 chr3L 19439129 19439196 chr3L 19439258 19439325 23 129 7.5 9.0 8.2 2.5 196 chr3L 19439129 intergenic not near genes chr3L 19439227 intergenic not near genes chr3L 19439325 intergenic not near genes chr3L_23_19435001 chr3L_19435001 RAL-850 2299 chr3L 19488491 19488500 chr3L 19488623 19488632 4 132 9.0 11.5 10.2 0.4 141 chr3L 19488491 intergenic pncr009:3L -,CG32212 + chr3L 19488562 intergenic pncr009:3L -,CG32212 + chr3L 19488632 intergenic pncr009:3L -,CG32212 + chr3L_4_19485001 chr3L_19485001 RAL-850 2300 chr3L 19514153 19514170 chr3L 19514319 19514351 12 187 7.0 12.0 9.5 1.1 198 chr3L 19514153 intergenic not near genes chr3L 19514252 intergenic not near genes chr3L 19514351 intergenic not near genes chr3L_12_19510001 chr3L_19510001 RAL-850 2301 chr3L 19527881 19527948 chr3L 19528010 19528077 26 129 11.5 9.0 10.2 2.3 196 chr3L 19527881 intergenic not near genes chr3L 19527979 intergenic not near genes chr3L 19528077 intergenic not near genes chr3L_26_19525001 chr3L_19525001 RAL-850 2302 chr3L 19644906 19644967 chr3L 19645065 19645124 12 158 3.5 8.0 5.8 1.8 218 chr3L 19644906 intergenic not near genes chr3L 19645015 intergenic not near genes chr3L 19645124 intergenic not near genes chr3L_12_19645001 chr3L_19645001 RAL-850 2303 chr3L 19792327 19792359 chr3L 19792472 19792504 14 145 22.5 18.5 20.5 0.7 177 chr3L 19792327 intron,intron CG42637 -,Gyc76C - chr3L 19792416 intron,intron CG42637 -,Gyc76C - chr3L 19792504 intron,intron CG42637 -,Gyc76C - chr3L_14_19790001 chr3L_19790001 RAL-850 2304 chr3L 19820248 19820319 chr3L 19827847 19827918 412 31 7599 5.5 7.0 6.2 4.3 7670 chr3L 19820248 intron Deaf1 + chr3L 19824083 intron Deaf1 + chr3L 19827918 intron Deaf1 + chr3L_31_19820001 chr3L_19820001 RAL-850 2305 chr3L 19848482 19848528 chr3L 19857723 19857769 roo 16 9239 8.5 12.5 10.5 1.4 9287 chr3L 19848482 intron Papss + chr3L 19853126 intron Papss + chr3L 19857769 intron Papss + chr3L_16_19850001 chr3L_19850001 RAL-850 2306 chr3L 19861782 19861842 chr3L 19863620 19863680 S-element 21 1836 9.5 7.5 8.5 2.2 1898 chr3L 19861782 5` UTR CR45433 + chr3L 19862731 intergenic not near genes chr3L 19863680 intergenic not near genes chr3L_21_19860001 chr3L_19860001 RAL-850 2307 chr3L 19933489 19933559 chr3L 19934361 19934431 39 872 5.0 5.5 5.2 6.3 942 chr3L 19933489 intergenic CR45678 + chr3L 19933960 5` UTR CR45678 + chr3L 19934431 intergenic CR45678 + chr3L_39_19930001 chr3L_19930001 RAL-850 2308 chr3L 19981160 19981234 chr3L 19981290 19981364 23 130 12.0 8.5 10.2 2.1 204 chr3L 19981160 intergenic not near genes chr3L 19981262 intergenic CG17732 + chr3L 19981364 intergenic CG17732 + chr3L_23_19980001 chr3L_19980001 RAL-850 2309 chr3L 20081025 20081035 chr3L 20081168 20081177 6 143 2.0 19.5 10.8 0.5 152 chr3L 20081025 intron sNPF-R - chr3L 20081101 intron sNPF-R - chr3L 20081177 intron sNPF-R - chr3L_6_20080001 chr3L_20080001 RAL-850 2310 chr3L 20083409 20083421 chr3L 20083521 20083552 8 122 24.0 25.0 24.5 0.3 143 chr3L 20083409 intron sNPF-R - chr3L 20083480 intron sNPF-R - chr3L 20083552 intron sNPF-R - chr3L_8_20080001 chr3L_20080001 RAL-850 2311 chr3L 20113617 20113675 chr3L 20122924 20122982 roo 27 9307 10.0 9.0 9.5 2.6 9365 chr3L 20113617 intergenic not near genes chr3L 20118300 intergenic not near genes chr3L 20122982 intergenic not near genes chr3L_27_20115001 chr3L_20115001 RAL-850 2312 chr3L 20143040 20143106 chr3L 20143170 20143236 27 130 9.0 9.5 9.2 2.6 196 chr3L 20143040 intergenic not near genes chr3L 20143138 intergenic not near genes chr3L 20143236 intergenic not near genes chr3L_27_20140001 chr3L_20140001 RAL-850 2313 chr3L 20148237 20148312 chr3L 20148377 20148452 27 140 7.5 11.0 9.2 2.6 215 chr3L 20148237 intergenic not near genes chr3L 20148344 intergenic not near genes chr3L 20148452 intergenic not near genes chr3L_27_20145001 chr3L_20145001 RAL-850 2314 chr3L 20156115 20156193 chr3L 20156287 20156354 36 168 9.0 8.5 8.8 3.7 239 chr3L 20156115 intron CG42674 - chr3L 20156234 intron CG42674 - chr3L 20156354 intron CG42674 - chr3L_36_20155001 chr3L_20155001 RAL-850 2315 chr3L 20212562 20212580 chr3L 20218189 20218207 mdg3 10 5627 19.0 10.0 14.5 0.6 5645 chr3L 20212562 intergenic CG7017 - chr3L 20215384 intergenic not near genes chr3L 20218207 intergenic CG6933 - chr3L_10_20215001 chr3L_20215001 RAL-850 2316 chr3L 20256609 20256619 chr3L 20256769 20256779 4 160 15.5 13.5 14.5 0.3 170 chr3L 20256609 exon rdgC + chr3L 20256694 intron rdgC + chr3L 20256779 intron rdgC + chr3L_4_20255001 chr3L_20255001 RAL-850 2317 chr3L 20256620 20256651 chr3L 20256756 20256811 19 155 12.0 10.5 11.2 1.6 191 chr3L 20256620 exon rdgC + chr3L 20256716 intron rdgC + chr3L 20256811 intron rdgC + chr3L_19_20255001 chr3L_20255001 RAL-850 2318 chr3L 20256655 20256661 chr3L 20256745 20256821 8 148 10.0 6.5 8.2 0.9 166 chr3L 20256655 intron rdgC + chr3L 20256738 intron rdgC + chr3L 20256821 intron rdgC + chr3L_8_20255001 chr3L_20255001 RAL-850 2319 chr3L 20386895 20386970 chr3L 20387047 20387122 31 150 10.0 11.0 10.5 2.7 227 chr3L 20386895 intron fbl + chr3L 20387008 intron fbl + chr3L 20387122 intron fbl + chr3L_31_20385001 chr3L_20385001 RAL-850 2320 chr3L 20402149 20402221 chr3L 20402280 20402342 24 130 6.0 7.0 6.5 3.2 193 chr3L 20402149 intergenic not near genes chr3L 20402246 intergenic not near genes chr3L 20402342 intergenic not near genes chr3L_24_20400001 chr3L_20400001 RAL-850 2321 chr3L 20403532 20403595 chr3L 20403677 20403740 24 144 12.0 9.5 10.8 2.0 208 chr3L 20403532 intergenic not near genes chr3L 20403636 intergenic not near genes chr3L 20403740 intergenic not near genes chr3L_24_20400001 chr3L_20400001 RAL-850 2322 chr3L 20447656 20447729 chr3L 20447785 20447862 8 132 3.5 3.0 3.2 1.9 206 chr3L 20447656 intron CG5910 + chr3L 20447759 intron CG5910 + chr3L 20447862 intron CG5910 + chr3L_8_20445001 chr3L_20445001 RAL-850 2323 chr3L 20476714 20476772 chr3L 20484363 20484421 springer 30 7649 9.0 7.5 8.2 3.3 7707 chr3L 20476714 3` UTR isoQC + chr3L 20480568 intergenic not near genes chr3L 20484421 3` UTR ZnT77C - chr3L_30_20480001 chr3L_20480001 RAL-850 2324 chr3L 20525229 20525229 chr3L 22908066 22908067 7 2382838 24.5 37.5 31.0 0.2 2382838 chr3L 20525229 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_7_21715001 chr3L_21715001 RAL-850 2325 chr3L 20536264 20536337 chr3L 20536395 20536468 31 130 11.5 8.5 10.0 2.8 204 chr3L 20536264 intron Rcd2 - chr3L 20536366 intron Rcd2 - chr3L 20536468 intron Rcd2 - chr3L_31_20535001 chr3L_20535001 RAL-850 2326 chr3L 20548317 20548381 chr3L 20548456 20548520 18 139 6.0 9.0 7.5 2.1 203 chr3L 20548317 intergenic not near genes chr3L 20548418 intergenic not near genes chr3L 20548520 intergenic not near genes chr3L_18_20545001 chr3L_20545001 RAL-850 2327 chr3L 20590027 20590061 chr3L 20590605 20590634 412 18 581 14.5 3.5 9.0 1.8 607 chr3L 20590027 intergenic not near genes chr3L 20590330 intergenic not near genes chr3L 20590634 intergenic not near genes chr3L_18_20590001 chr3L_20590001 RAL-850 2328 chr3L 20590062 20590096 chr3L 20590601 20590662 412 13 576 7.0 3.5 5.2 2.1 600 chr3L 20590062 intergenic not near genes chr3L 20590362 intergenic not near genes chr3L 20590662 intergenic not near genes chr3L_13_20590001 chr3L_20590001 RAL-850 2329 chr3L 20634983 20635024 chr3L 20635121 20635151 10 129 15.0 13.5 14.2 0.7 168 chr3L 20634983 intergenic CR44682 + chr3L 20635067 intergenic CR44682 + chr3L 20635151 intergenic CR44682 + chr3L_10_20635001 chr3L_20635001 RAL-850 2330 chr3L 20710715 20710787 chr3L 20710842 20710907 18 126 7.0 5.5 6.2 2.5 192 chr3L 20710715 intergenic not near genes chr3L 20710811 intergenic not near genes chr3L 20710907 intergenic not near genes chr3L_18_20710001 chr3L_20710001 RAL-850 2331 chr3L 20849226 20849291 chr3L 20849355 20849420 30 128 5.0 12.5 8.8 3.1 194 chr3L 20849226 intron CG32432 - chr3L 20849323 intron CG32432 - chr3L 20849420 intron CG32432 - chr3L_30_20845001 chr3L_20845001 RAL-850 2332 chr3L 20858032 20858090 chr3L 20858181 20858239 22 149 5.0 8.5 6.8 2.8 207 chr3L 20858032 intron CG32432 - chr3L 20858136 intron CG32432 - chr3L 20858239 intron CG32432 - chr3L_22_20855001 chr3L_20855001 RAL-850 2333 chr3L 20868118 20868132 chr3L 20868490 20868504 10 371 25.5 9.0 17.2 0.5 386 chr3L 20868118 intron CG32432 - chr3L 20868311 intron CG32432 - chr3L 20868504 intron CG32432 - chr3L_10_20865001 chr3L_20865001 RAL-850 2334 chr3L 20868133 20868188 chr3L 20868486 20868560 28 367 12.5 8.0 10.2 2.5 427 chr3L 20868133 intron CG32432 - chr3L 20868346 intron CG32432 - chr3L 20868560 intron CG32432 - chr3L_28_20865001 chr3L_20865001 RAL-850 2335 chr3L 20889742 20889779 chr3L 20889873 20889910 11 130 12.0 20.0 16.0 0.6 168 chr3L 20889742 intergenic not near genes chr3L 20889826 intergenic not near genes chr3L 20889910 intergenic not near genes chr3L_11_20885001 chr3L_20885001 RAL-850 2336 chr3L 20986719 20986721 chr3L 20986847 20986849 4 128 22.0 12.0 17.0 0.2 130 chr3L 20986719 intergenic not near genes chr3L 20986784 intergenic not near genes chr3L 20986849 intergenic not near genes chr3L_4_20985001 chr3L_20985001 RAL-850 2337 chr3L 20986724 20986789 chr3L 20986841 20986905 24 125 11.0 11.5 11.2 2.0 181 chr3L 20986724 intergenic not near genes chr3L 20986814 intergenic not near genes chr3L 20986905 intergenic not near genes chr3L_24_20985001 chr3L_20985001 RAL-850 2338 chr3L 21014884 21014946 chr3L 21023398 21023424 Tirant 30 8506 6.0 9.0 7.5 3.5 8540 chr3L 21014884 intron skd - chr3L 21019154 intron skd - chr3L 21023424 intron skd - chr3L_30_21015001 chr3L_21015001 RAL-850 2339 chr3L 21047589 21047663 chr3L 21047762 21047836 25 168 6.0 7.0 6.5 3.3 247 chr3L 21047589 intron siz + chr3L 21047712 intron siz + chr3L 21047836 intron siz + chr3L_25_21045001 chr3L_21045001 RAL-850 2340 chr3L 21082170 21082231 chr3L 21082298 21082359 19 128 5.5 5.5 5.5 2.9 189 chr3L 21082170 intron ko - chr3L 21082264 intron ko - chr3L 21082359 intron ko - chr3L_19_21080001 chr3L_21080001 RAL-850 2341 chr3L 21100461 21100500 chr3L 21100773 21100812 20 312 12.0 0.0 6.0 2.9 351 chr3L 21100461 intron ko - chr3L 21100636 intron ko - chr3L 21100812 intron ko - chr3L_20_21100001 chr3L_21100001 RAL-850 2342 chr3L 21151823 21151882 chr3L 21156957 21157015 flea 27 5134 9.0 8.5 8.8 2.8 5192 chr3L 21151823 intron Ac78C - chr3L 21154419 intron Ac78C - chr3L 21157015 intron Ac78C - chr3L_27_21150001 chr3L_21150001 RAL-850 2343 chr3L 21306101 21306173 chr3L 21315310 21315382 roo 22 9208 10.0 7.0 8.5 2.3 9281 chr3L 21306101 3` UTR CG7632 + chr3L 21310742 intron Pc - chr3L 21315382 3` UTR Pc - chr3L_22_21310001 chr3L_21310001 RAL-850 2344 chr3L 21361686 21361746 chr3L 21362690 21362750 G2 24 1004 14.5 11.5 13.0 1.7 1064 chr3L 21361686 intergenic CG32440 + chr3L 21362218 intergenic not near genes chr3L 21362750 intergenic not near genes chr3L_24_21360001 chr3L_21360001 RAL-850 2345 chr3L 21372679 21372751 chr3L 21379237 21379308 McClintock 11 6558 3.5 5.0 4.2 2.1 6629 chr3L 21372679 intergenic not near genes chr3L 21375994 intergenic not near genes chr3L 21379308 intergenic not near genes chr3L_11_21375001 chr3L_21375001 RAL-850 2346 chr3L 21408434 21408487 chr3L 21408542 21408615 20 123 1.0 7.0 4.0 4.0 181 chr3L 21408434 intron rgn + chr3L 21408524 intron rgn + chr3L 21408615 intron rgn + chr3L_20_21405001 chr3L_21405001 RAL-850 2347 chr3L 21414483 21414545 chr3L 21414609 21414667 25 126 9.5 11.0 10.2 2.2 184 chr3L 21414483 intron rgn + chr3L 21414575 intron rgn + chr3L 21414667 intron rgn + chr3L_25_21410001 chr3L_21410001 RAL-850 2348 chr3L 21458301 21458307 chr3L 21458440 21458452 4 144 18.0 9.0 13.5 0.3 151 chr3L 21458301 intergenic not near genes chr3L 21458376 intergenic not near genes chr3L 21458452 intergenic not near genes chr3L_4_21455001 chr3L_21455001 RAL-850 2349 chr3L 21498827 21498835 chr3L 21500493 21500521 1360 8 1681 16.5 18.5 17.5 0.4 1694 chr3L 21498827 5` UTR,intron CR43933 +,Glg1 - chr3L 21499674 intron Glg1 - chr3L 21500521 intron Glg1 - chr3L_8_21495001 chr3L_21495001 RAL-850 2350 chr3L 21498839 21498853 chr3L 21500491 21500539 1360 13 1680 12.5 17.0 14.8 0.8 1700 chr3L 21498839 intron Glg1 - chr3L 21499689 intron Glg1 - chr3L 21500539 intron Glg1 - chr3L_13_21495001 chr3L_21495001 RAL-850 2351 chr3L 21501131 21501156 chr3L 21501274 21501300 1360 8 142 9.0 15.0 12.0 0.6 169 chr3L 21501131 intron Glg1 - chr3L 21501216 intron Glg1 - chr3L 21501300 intron Glg1 - chr3L_8_21500001 chr3L_21500001 RAL-850 2352 chr3L 21541629 21541689 chr3L 21541810 21541870 INE-1 25 180 10.0 7.5 8.8 2.6 241 chr3L 21541629 intergenic VhaM9.7-b + chr3L 21541750 intergenic not near genes chr3L 21541870 intergenic CG33290 + chr3L_25_21540001 chr3L_21540001 RAL-850 2353 chr3L 21749295 21749301 chr3L 21754505 21754511 Doc 4 5210 26.0 11.0 18.5 0.2 5216 chr3L 21749295 intron Syn1 - chr3L 21751903 intron Syn1 - chr3L 21754511 intron Syn1 - chr3L_4_21750001 chr3L_21750001 RAL-850 2354 chr3L 21749316 21749319 chr3L 21754501 21754524 Doc 4 5201 21.5 10.0 15.8 0.2 5208 chr3L 21749316 intron Syn1 - chr3L 21751920 intron Syn1 - chr3L 21754524 intron Syn1 - chr3L_4_21750001 chr3L_21750001 RAL-850 2355 chr3L 21749327 21749334 chr3L 21754537 21754543 Doc 5 5210 16.5 16.5 16.5 0.3 5216 chr3L 21749327 intron Syn1 - chr3L 21751935 intron Syn1 - chr3L 21754543 intron Syn1 - chr3L_5_21750001 chr3L_21750001 RAL-850 2356 chr3L 21769008 21769072 chr3L 21769145 21769209 27 136 5.0 9.0 7.0 3.4 201 chr3L 21769008 intron,intron Syn1 -,CG42689 + chr3L 21769108 intron,intron Syn1 -,CG42689 + chr3L 21769209 intron,intron Syn1 -,CG42689 + chr3L_27_21765001 chr3L_21765001 RAL-850 2357 chr3L 21769993 21770040 chr3L 21770127 21770177 21 132 12.5 13.5 13.0 1.5 184 chr3L 21769993 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770085 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770177 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L_21_21770001 chr3L_21770001 RAL-850 2358 chr3L 21776635 21776696 chr3L 21776768 21776833 7 136 0.0 4.0 2.0 2.3 198 chr3L 21776635 intron,intron CG42689 +,CG42552 + chr3L 21776734 intron,intron CG42689 +,CG42552 + chr3L 21776833 exon,intron CG42689 +,CG42552 + chr3L_7_21775001 chr3L_21775001 RAL-850 2359 chr3L 21809940 21809941 chr3L 21810077 21810086 6 141 26.5 25.5 26.0 0.2 146 chr3L 21809940 intron eg + chr3L 21810013 intron eg + chr3L 21810086 intron eg + chr3L_6_21810001 chr3L_21810001 RAL-850 2360 chr3L 21809946 21809973 chr3L 21810067 21810076 16 129 18.0 23.5 20.8 0.7 130 chr3L 21809946 intron eg + chr3L 21810011 intron eg + chr3L 21810076 intron eg + chr3L_16_21810001 chr3L_21810001 RAL-850 2361 chr3L 21845199 21845261 chr3L 21845481 21845543 26 282 8.5 4.5 6.5 3.5 344 chr3L 21845199 5` UTR mub + chr3L 21845371 intron mub + chr3L 21845543 intron mub + chr3L_26_21845001 chr3L_21845001 RAL-850 2362 chr3L 21849451 21849527 chr3L 21849582 21849659 27 131 9.0 7.5 8.2 2.9 208 chr3L 21849451 intron mub + chr3L 21849555 intron mub + chr3L 21849659 intron mub + chr3L_27_21845001 chr3L_21845001 RAL-850 2363 chr3L 22008797 22008876 chr3L 22008924 22008938 36 119 9.5 9.5 9.5 3.4 141 chr3L 22008797 intergenic not near genes chr3L 22008868 intergenic not near genes chr3L 22008938 intergenic not near genes chr3L_36_22005001 chr3L_22005001 RAL-850 2364 chr3L 22058247 22058323 chr3L 22058574 22058650 37 326 5.5 11.0 8.2 4.0 403 chr3L 22058247 intron Oct-TyrR + chr3L 22058448 intron Oct-TyrR + chr3L 22058650 intron Oct-TyrR + chr3L_37_22055001 chr3L_22055001 RAL-850 2365 chr3L 22092764 22092827 chr3L 22092915 22092978 36 148 5.5 10.0 7.8 4.1 214 chr3L 22092764 intergenic not near genes chr3L 22092871 intergenic not near genes chr3L 22092978 intergenic not near genes chr3L_36_22090001 chr3L_22090001 RAL-850 2366 chr3L 22099634 22099695 chr3L 22105870 22105931 3S18 30 6235 12.0 9.5 10.8 2.5 6297 chr3L 22099634 intergenic not near genes chr3L 22102782 intergenic not near genes chr3L 22105931 intergenic not near genes chr3L_30_22100001 chr3L_22100001 RAL-850 2367 chr3L 22124758 22124831 chr3L 22124891 22124964 35 129 7.5 9.5 8.5 3.7 206 chr3L 22124758 intergenic not near genes chr3L 22124861 intergenic not near genes chr3L 22124964 intergenic not near genes chr3L_35_22120001 chr3L_22120001 RAL-850 2368 chr3L 22130449 22130522 chr3L 22130645 22130718 28 196 6.5 10.5 8.5 2.9 269 chr3L 22130449 intergenic not near genes chr3L 22130584 intergenic not near genes chr3L 22130718 intergenic not near genes chr3L_28_22130001 chr3L_22130001 RAL-850 2369 chr3L 22139480 22139534 chr3L 22139624 22139678 20 142 1.0 9.0 5.0 3.3 198 chr3L 22139480 intron olf413 + chr3L 22139579 intron olf413 + chr3L 22139678 intron olf413 + chr3L_20_22135001 chr3L_22135001 RAL-850 2370 chr3L 22152149 22152191 chr3L 22152256 22152324 15 117 8.0 6.0 7.0 1.9 175 chr3L 22152149 intron olf413 + chr3L 22152236 intron olf413 + chr3L 22152324 intron olf413 + chr3L_15_22150001 chr3L_22150001 RAL-850 2371 chr3L 22223400 22223419 chr3L 22223605 22223630 12 207 13.0 9.0 11.0 1.0 230 chr3L 22223400 intron olf413 + chr3L 22223515 intron olf413 + chr3L 22223630 intron olf413 + chr3L_12_22220001 chr3L_22220001 RAL-850 2372 chr3L 22223423 22223454 chr3L 22223601 22223662 19 203 7.5 8.5 8.0 2.1 239 chr3L 22223423 intron olf413 + chr3L 22223542 intron olf413 + chr3L 22223662 exon olf413 + chr3L_19_22220001 chr3L_22220001 RAL-850 2373 chr3L 22379888 22379901 chr3L 22380036 22380050 6 148 19.0 9.0 14.0 0.4 162 chr3L 22379888 intron Ten-m - chr3L 22379969 intron Ten-m - chr3L 22380050 intron Ten-m - chr3L_6_22375001 chr3L_22375001 RAL-850 2374 chr3L 22379902 22379961 chr3L 22380033 22380110 24 145 7.5 9.0 8.2 2.6 208 chr3L 22379902 intron Ten-m - chr3L 22380006 intron Ten-m - chr3L 22380110 intron Ten-m - chr3L_24_22380001 chr3L_22380001 RAL-850 2375 chr3L 22402494 22402559 chr3L 22402689 22402754 32 195 56.5 61.5 59.0 0.5 260 chr3L 22402494 intron Ten-m - chr3L 22402624 intron Ten-m - chr3L 22402754 intron Ten-m - chr3L_32_22400001 chr3L_22400001 RAL-850 2376 chr3L 22413821 22413901 chr3L 22413955 22414014 33 125 7.0 7.5 7.2 4.0 193 chr3L 22413821 intergenic not near genes chr3L 22413918 intergenic not near genes chr3L 22414014 intergenic not near genes chr3L_33_22410001 chr3L_22410001 RAL-850 2377 chr3L 22447155 22447218 chr3L 22447296 22447359 25 141 8.5 8.0 8.2 2.7 204 chr3L 22447155 intergenic not near genes chr3L 22447257 intergenic not near genes chr3L 22447359 intergenic not near genes chr3L_25_22445001 chr3L_22445001 RAL-850 2378 chr3L 22477003 22477083 chr3L 22477143 22477217 15 135 1.0 8.0 4.5 2.7 214 chr3L 22477003 intergenic not near genes chr3L 22477110 intergenic not near genes chr3L 22477217 intergenic not near genes chr3L_15_22475001 chr3L_22475001 RAL-850 2379 chr3L 22523491 22523558 chr3L 22523715 22523782 24 211 6.0 11.0 8.5 2.5 291 chr3L 22523491 intergenic not near genes chr3L 22523636 intergenic not near genes chr3L 22523782 intergenic not near genes chr3L_24_22520001 chr3L_22520001 RAL-850 2380 chr3L 22525522 22525529 chr3L 22530093 22530100 5 4571 54.5 68.0 61.2 0.1 4578 chr3L 22525522 intergenic not near genes chr3L 22527811 intergenic not near genes chr3L 22530100 intergenic not near genes chr3L_5_22525001 chr3L_22525001 RAL-850 2381 chr3L 22525515 22525560 chr3L 22530101 22530161 40 4579 52.0 67.0 59.5 0.7 4646 chr3L 22525515 intergenic not near genes chr3L 22527838 intergenic not near genes chr3L 22530161 intergenic not near genes chr3L_40_22525001 chr3L_22525001 RAL-850 2382 chr3L 22555725 22555744 chr3L 22563245 22563264 blood 12 7519 14.0 4.5 9.2 1.2 7539 chr3L 22555725 intergenic not near genes chr3L 22559494 intergenic not near genes chr3L 22563264 intergenic not near genes chr3L_12_22555001 chr3L_22555001 RAL-850 2383 chr3L 22555749 22555802 chr3L 22563239 22563288 blood 20 7515 5.5 4.5 5.0 3.3 7539 chr3L 22555749 intergenic not near genes chr3L 22559518 intergenic not near genes chr3L 22563288 intergenic not near genes chr3L_20_22555001 chr3L_22555001 RAL-850 2384 chr3L 22564501 22564547 chr3L 22564963 22565009 24 462 45.5 61.0 53.2 0.4 508 chr3L 22564501 intergenic not near genes chr3L 22564755 intergenic not near genes chr3L 22565009 intergenic not near genes chr3L_24_22560001 chr3L_22560001 RAL-850 2385 chr3L 22577585 22577643 chr3L 22582423 22582461 Doc 17 4831 9.0 14.5 11.8 1.3 4876 chr3L 22577585 intergenic not near genes chr3L 22580023 intergenic not near genes chr3L 22582461 3` UTR CG14459 - chr3L_17_22580001 chr3L_22580001 RAL-850 2386 chr3L 22617153 22617211 chr3L 22624655 22624713 blood 28 7502 7.0 11.5 9.2 2.7 7560 chr3L 22617153 intron CG14459 - chr3L 22620933 intron CG14459 - chr3L 22624713 intron CG14459 - chr3L_28_22620001 chr3L_22620001 RAL-850 2387 chr3L 22626823 22626889 chr3L 22626963 22627029 37 137 5.0 9.5 7.2 4.5 206 chr3L 22626823 intron CG14459 - chr3L 22626926 intron CG14459 - chr3L 22627029 intron CG14459 - chr3L_37_22625001 chr3L_22625001 RAL-850 2388 chr3L 22678046 22678086 chr3L 22678175 22678217 24 136 16.5 8.5 12.5 1.8 171 chr3L 22678046 intron CG14457 + chr3L 22678132 intron CG14457 + chr3L 22678217 intron CG14457 + chr3L_24_22675001 chr3L_22675001 RAL-850 2389 chr3L 22678088 22678101 chr3L 22678174 22678244 6 124 11.5 8.5 10.0 0.5 156 chr3L 22678088 intron CG14457 + chr3L 22678166 intron CG14457 + chr3L 22678244 intron CG14457 + chr3L_6_22675001 chr3L_22675001 RAL-850 2390 chr3L 22721103 22721153 chr3L 22721662 22721695 23 547 55.5 76.0 65.8 0.3 592 chr3L 22721103 intergenic CG14451 - chr3L 22721399 exon CG14451 - chr3L 22721695 exon CG14451 - chr3L_23_22720001 chr3L_22720001 RAL-850 2391 chr3L 22761345 22761404 chr3L 22766829 22766888 Ivk 24 5484 11.5 13.0 12.2 1.8 5543 chr3L 22761345 intron SPoCk + chr3L 22764116 intron SPoCk + chr3L 22766888 intron SPoCk + chr3L_24_22760001 chr3L_22760001 RAL-850 2392 chr3L 22821879 22821953 chr3L 22822010 22822084 27 127 7.0 5.5 6.2 3.8 205 chr3L 22821879 intron jim - chr3L 22821982 intron jim - chr3L 22822084 intron jim - chr3L_27_22820001 chr3L_22820001 RAL-850 2393 chr3L 22825504 22825559 chr3L 22825631 22825686 26 127 7.0 10.5 8.8 2.7 182 chr3L 22825504 intron jim - chr3L 22825595 intron jim - chr3L 22825686 intron jim - chr3L_26_22825001 chr3L_22825001 RAL-850 2394 chr3L 22838539 22838557 chr3L 22838670 22838688 7 131 25.5 10.5 18.0 0.4 149 chr3L 22838539 intergenic CG11226 + chr3L 22838614 intergenic CG11226 + chr3L 22838688 intergenic not near genes chr3L_7_22835001 chr3L_22835001 RAL-850 2395 chr3L 22838561 22838621 chr3L 22838667 22838703 28 122 9.0 11.0 10.0 2.5 142 chr3L 22838561 intergenic CG11226 + chr3L 22838632 intergenic CG11226 + chr3L 22838703 intergenic not near genes chr3L_28_22835001 chr3L_22835001 RAL-850 2396 chr3L 22853418 22853717 chr3L 22853555 22853852 61 135 13.5 9.5 11.5 4.9 434 chr3L 22853418 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853635 5` UTR CR43426 + chr3L 22853852 5` UTR CR43426 + chr3L_61_22850001 chr3L_22850001 RAL-850 2397 chr3L 22865944 22865993 chr3L 22867127 22867176 Doc 22 1183 7.0 10.0 8.5 2.3 1232 chr3L 22865944 exon CG33170 + chr3L 22866560 intron CG33170 + chr3L 22867176 intron CG33170 + chr3L_22_22865001 chr3L_22865001 RAL-850 2398 chr3L 9307795 9307797 chr3L 22908066 22908066 4 13600270 27.5 37.5 32.5 0.1 13600271 chr3L 9307795 intergenic not near genes chr3L 16107930 intron Zn72D - chr3L 22908066 intergenic not near genes chr3L_4_16105001 chr3L_16105001 RAL-850 2399 chr3L 19220633 19220637 chr3L 22908066 22908066 28 3687431 35.0 37.5 36.2 0.8 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_28_21060001 chr3L_21060001 RAL-850 2400 chr3L 20525228 20525230 chr3L 22908066 22908066 21 2382837 23.5 37.5 30.5 0.7 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_21_21715001 chr3L_21715001 RAL-850 2401 chr3L 19220633 19220637 chr3L 22908067 22908067 12 3687432 35.0 37.0 36.0 0.3 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_12_21060001 chr3L_21060001 RAL-850 2402 chr3L 22908981 22908997 chr3L 22909119 22909138 9 140 17.0 11.5 14.2 0.6 157 chr3L 22908981 intergenic CR45661 + chr3L 22909060 intergenic CR45661 + chr3L 22909138 intergenic CR45661 + chr3L_9_22905001 chr3L_22905001 RAL-850 2403 chr3L 22908998 22909044 chr3L 22909112 22909185 22 134 8.5 10.5 9.5 2.1 187 chr3L 22908998 intergenic CR45661 + chr3L 22909092 intergenic CR45661 + chr3L 22909185 intergenic CR45661 + chr3L_22_22905001 chr3L_22905001 RAL-850 2404 chr3L 22924900 22924977 chr3L 22925026 22925105 20 126 7.5 6.5 7.0 2.5 205 chr3L 22924900 intergenic not near genes chr3L 22925002 intergenic not near genes chr3L 22925105 intergenic not near genes chr3L_20_22925001 chr3L_22925001 RAL-850 2405 chr3L 22974322 22974333 chr3L 22974450 22974461 4 127 26.0 11.0 18.5 0.2 139 chr3L 22974322 intergenic not near genes chr3L 22974392 intergenic not near genes chr3L 22974461 intergenic not near genes chr3L_4_22970001 chr3L_22970001 RAL-850 2406 chr3L 22974336 22974387 chr3L 22974449 22974516 22 124 9.0 11.5 10.2 2.0 180 chr3L 22974336 intergenic not near genes chr3L 22974426 intergenic not near genes chr3L 22974516 intergenic not near genes chr3L_22_22970001 chr3L_22970001 RAL-850 2407 chr3L 22975204 22975232 chr3L 22975345 22975373 9 137 18.0 8.0 13.0 0.6 169 chr3L 22975204 intergenic not near genes chr3L 22975288 intergenic not near genes chr3L 22975373 intergenic not near genes chr3L_9_22975001 chr3L_22975001 RAL-850 2408 chr3L 22989822 22989888 chr3L 22996846 22996886 297 31 7023 8.5 0.0 4.2 6.0 7064 chr3L 22989822 intergenic not near genes chr3L 22993354 intergenic not near genes chr3L 22996886 intergenic not near genes chr3L_31_22990001 chr3L_22990001 RAL-850 2409 chr3L 23004884 23004922 chr3L 23005260 23005298 14 374 4.5 10.5 7.5 1.6 414 chr3L 23004884 intron nrm + chr3L 23005091 intron nrm + chr3L 23005298 intron nrm + chr3L_14_23005001 chr3L_23005001 RAL-850 2410 chr3L 23004925 23004938 chr3L 23005236 23005291 4 350 2.5 8.0 5.2 0.6 366 chr3L 23004925 intron nrm + chr3L 23005108 intron nrm + chr3L 23005291 intron nrm + chr3L_4_23005001 chr3L_23005001 RAL-850 2411 chr3L 23101239 23101276 chr3L 23101500 23101537 6 261 15.0 8.5 11.8 0.5 298 chr3L 23101239 intron CkIIalpha + chr3L 23101388 intron CkIIalpha + chr3L 23101537 intron CkIIalpha + chr3L_6_23100001 chr3L_23100001 RAL-850 2412 chr3L 23101283 23101310 chr3L 23101499 23101571 10 256 8.0 8.5 8.2 1.1 288 chr3L 23101283 intron CkIIalpha + chr3L 23101427 intron CkIIalpha + chr3L 23101571 intron CkIIalpha + chr3L_10_23100001 chr3L_23100001 RAL-850 2413 chr3L 23165890 23165907 chr3L 23173384 23173401 Quasimodo 4 7494 11.0 3.0 7.0 0.5 7511 chr3L 23165890 intergenic not near genes chr3L 23169646 intergenic not near genes chr3L 23173401 intergenic not near genes chr3L_4_23165001 chr3L_23165001 RAL-850 2414 chr3L 23182231 23182247 chr3L 23182382 23182411 11 158 20.0 12.0 16.0 0.6 180 chr3L 23182231 intron CG34031 + chr3L 23182321 intron CG34031 + chr3L 23182411 intron CG34031 + chr3L_11_23180001 chr3L_23180001 RAL-850 2415 chr3L 23182252 23182286 chr3L 23182373 23182450 19 156 7.0 9.0 8.0 2.1 198 chr3L 23182252 intron CG34031 + chr3L 23182351 intron CG34031 + chr3L 23182450 intron CG34031 + chr3L_19_23180001 chr3L_23180001 RAL-850 2416 chr3L 23205402 23205448 chr3L 23205682 23205702 24 279 13.5 5.5 9.5 2.3 300 chr3L 23205402 intergenic not near genes chr3L 23205552 intergenic not near genes chr3L 23205702 intergenic not near genes chr3L_24_23205001 chr3L_23205001 RAL-850 2417 chr3L 23251899 23251908 chr3L 23252066 23252075 5 166 20.0 10.0 15.0 0.3 176 chr3L 23251899 intron nAChRalpha4 + chr3L 23251987 intron nAChRalpha4 + chr3L 23252075 intron nAChRalpha4 + chr3L_5_23250001 chr3L_23250001 RAL-850 2418 chr3L 23251910 23251951 chr3L 23252065 23252086 15 163 12.5 10.0 11.2 1.2 176 chr3L 23251910 intron nAChRalpha4 + chr3L 23251998 intron nAChRalpha4 + chr3L 23252086 intron nAChRalpha4 + chr3L_15_23250001 chr3L_23250001 RAL-850 2419 chr3L 23428201 23428268 chr3L 23428331 23428398 22 128 12.5 13.0 12.8 1.6 197 chr3L 23428201 intergenic not near genes chr3L 23428300 intergenic not near genes chr3L 23428398 intergenic not near genes chr3L_22_23425001 chr3L_23425001 RAL-850 2420 chr3L 23468010 23468038 chr3L 23468146 23468172 7 135 30.5 31.5 31.0 0.2 162 chr3L 23468010 intergenic not near genes chr3L 23468091 intergenic not near genes chr3L 23468172 intergenic not near genes chr3L_7_23465001 chr3L_23465001 RAL-850 2421 chr3L 23485822 23485886 chr3L 23485950 23486014 26 126 7.5 8.5 8.0 2.9 192 chr3L 23485822 intergenic not near genes chr3L 23485918 intergenic not near genes chr3L 23486014 intergenic not near genes chr3L_26_23485001 chr3L_23485001 RAL-850 2422 chr3L 23662536 23662553 chr3L 23662728 23662741 INE-1 6 191 15.5 3.0 9.2 0.6 205 chr3L 23662536 intron AGO3 + chr3L 23662638 intron AGO3 + chr3L 23662741 intron AGO3 + chr3L_6_23660001 chr3L_23660001 RAL-850 2423 chr3L 23665485 23665526 chr3L 23665625 23665644 gypsy8 12 138 43.5 33.5 38.5 0.3 159 chr3L 23665485 intron AGO3 + chr3L 23665564 intron AGO3 + chr3L 23665644 intron AGO3 + chr3L_12_23665001 chr3L_23665001 RAL-850 2424 chr3L 23823976 23824004 chr3L 23824439 23824467 10 461 10.5 6.0 8.2 1.1 491 chr3L 23823976 intergenic not near genes chr3L 23824222 intergenic not near genes chr3L 23824467 intergenic not near genes chr3L_10_23820001 chr3L_23820001 RAL-850 2425 chr3L 23848797 23848837 chr3L 23849671 23849711 R1A1-element 17 871 7.5 9.5 8.5 1.8 914 chr3L 23848797 intron CG40470 - chr3L 23849254 intron CG40470 - chr3L 23849711 intron CG40470 - chr3L_17_23845001 chr3L_23845001 RAL-850 2426 chr3L 23913397 23913466 chr3L 23913538 23913596 19 140 8.0 3.5 5.8 2.8 199 chr3L 23913397 intron CG40470 - chr3L 23913496 intron CG40470 - chr3L 23913596 intron CG40470 - chr3L_19_23910001 chr3L_23910001 RAL-850 2427 chr3L 24009625 24009687 chr3L 24009856 24009919 24 232 12.0 11.5 11.8 1.9 294 chr3L 24009625 intergenic CR40053 - chr3L 24009772 intergenic CR40053 - chr3L 24009919 intergenic CR40053 - chr3L_24_24005001 chr3L_24005001 RAL-850 2428 chr3L 24012366 24012439 chr3L 24020757 24020775 roo 15 8386 4.0 6.0 5.0 2.5 8409 chr3L 24012366 intergenic not near genes chr3L 24016570 intergenic not near genes chr3L 24020775 intergenic not near genes chr3L_15_24015001 chr3L_24015001 RAL-850 2429 chr3L 24021231 24021302 chr3L 24022438 24022509 1360 36 1205 11.0 9.0 10.0 3.3 1278 chr3L 24021231 intergenic not near genes chr3L 24021870 intergenic not near genes chr3L 24022509 intergenic not near genes chr3L_36_24020001 chr3L_24020001 RAL-850 2430 chr3L 24152746 24152813 chr3L 24153199 24153266 8 453 6.0 0.5 3.2 1.9 520 chr3L 24152746 intron Snap25 + chr3L 24153006 intron Snap25 + chr3L 24153266 intron Snap25 + chr3L_8_24150001 chr3L_24150001 RAL-850 2431 chr3L 24168760 24168818 chr3L 24176121 24176126 ZAM 15 7356 18.5 8.0 13.2 1.1 7366 chr3L 24168760 intron Snap25 + chr3L 24172443 intron Snap25 + chr3L 24176126 intron Snap25 + chr3L_15_24170001 chr3L_24170001 RAL-850 2432 chr3L 24764352 24764409 chr3L 24764482 24764539 4 130 4.5 1.5 3.0 1.0 187 chr3L 24764352 intron scro + chr3L 24764446 intron scro + chr3L 24764539 intron scro + chr3L_4_24760001 chr3L_24760001 RAL-850 2433 chr3L 24791853 24791886 chr3L 24796682 24796715 Doc 7 4829 11.0 7.0 9.0 0.7 4862 chr3L 24791853 intergenic not near genes chr3L 24794284 intergenic not near genes chr3L 24796715 intergenic not near genes chr3L_7_24790001 chr3L_24790001 RAL-850 2434 chr3L 25331629 25331653 chr3L 25331726 25331748 7 111 8.0 3.5 5.8 1.0 119 chr3L 25331629 intergenic not near genes chr3L 25331688 intergenic not near genes chr3L 25331748 intergenic not near genes chr3L_7_25330001 chr3L_25330001 RAL-850 2435 chr3L 26694915 26694919 chr3L 26695039 26695049 4 128 13.0 12.5 12.8 0.3 134 chr3L 26694915 intergenic not near genes chr3L 26694982 intergenic not near genes chr3L 26695049 intergenic not near genes chr3L_4_26690001 chr3L_26690001 RAL-850 2436 chr3L 26694920 26694943 chr3L 26695014 26695067 7 122 10.5 8.0 9.2 0.7 147 chr3L 26694920 intergenic not near genes chr3L 26694994 intergenic not near genes chr3L 26695067 intergenic not near genes chr3L_7_26690001 chr3L_26690001 RAL-850 2437 chr3L 23941237 23941238 chr3L 26882296 26882297 1360 4 2941059 25.5 2.0 13.8 0.3 2941060 chr3L 23941237 intron CG40470 - chr3L 25411767 intergenic not near genes chr3L 26882297 intergenic not near genes chr3L_4_25410001 chr3L_25410001 RAL-850 2438 chr3L 27356066 27356099 chr3L 27357315 27357348 1360 11 1248 8.0 1.5 4.8 1.9 1282 chr3L 27356066 intron Dbp80 + chr3L 27356707 intron Dbp80 + chr3L 27357348 intron Dbp80 + chr3L_11_27355001 chr3L_27355001 RAL-850 2439 chr3L 27368838 27368900 chr3L 27369433 27369496 18 595 12.0 3.0 7.5 2.1 658 chr3L 27368838 intron Dbp80 + chr3L 27369167 intron Dbp80 + chr3L 27369496 intron Dbp80 + chr3L_18_27365001 chr3L_27365001 RAL-850 2440 chr3L 27390638 27390702 chr3L 27390767 27390831 10 124 83.5 70.0 76.8 0.1 193 chr3L 27390638 intron Dbp80 + chr3L 27390734 intron Dbp80 + chr3L 27390831 intron Dbp80 + chr3L_10_27390001 chr3L_27390001 RAL-850 2441 chr3L 27728789 27728815 chr3L 27728931 27729005 7 178 3.0 7.0 5.0 1.2 216 chr3L 27728789 intergenic not near genes chr3L 27728897 intergenic not near genes chr3L 27729005 intergenic not near genes chr3L_7_27725001 chr3L_27725001 RAL-850 2442 chr3L 27980646 27980694 chr3L 27985494 27985542 Doc 16 4848 12.0 6.0 9.0 1.6 4896 chr3L 27980646 intron CG17514 - chr3L 27983094 intron CG17514 - chr3L 27985542 intron CG17514 - chr3L_16_27980001 chr3L_27980001 RAL-850 2443 chr3R 1021770 1021839 chr3R 1021974 1022043 25 205 37.5 34.0 35.8 0.7 273 chr3R 1021770 intergenic not near genes chr3R 1021906 intergenic not near genes chr3R 1022043 intergenic not near genes chr3R_25_1020001 chr3R_1020001 RAL-850 2444 chr3R 1062338 1062378 chr3R 1062546 1062586 4 208 7.0 4.5 5.8 0.6 248 chr3R 1062338 intron CG15831 + chr3R 1062462 intron CG15831 + chr3R 1062586 intron CG15831 + chr3R_4_1060001 chr3R_1060001 RAL-850 2445 chr3R 1443427 1443458 chr3R 1443557 1443588 7 129 3.0 8.5 5.8 1.0 161 chr3R 1443427 intron CG40155 + chr3R 1443508 intron CG40155 + chr3R 1443588 intron CG40155 + chr3R_7_1440001 chr3R_1440001 RAL-850 2446 chr3R 1867057 1867174 chr3R 1954884 1954925 Doc3-element 8 87801 32.5 10.0 21.2 0.4 87868 chr3R 1867057 intron CG42623 + chr3R 1910991 intron CG42623 + chr3R 1954925 intergenic not near genes chr3R_8_1910001 chr3R_1910001 RAL-850 2447 chr3R 1867049 1867064 chr3R 1869921 1869935 5 2871 39.5 30.0 34.8 0.1 2886 chr3R 1867049 intron CG42623 + chr3R 1868492 intron CG42623 + chr3R 1869935 intron CG42623 + chr3R_5_1865001 chr3R_1865001 RAL-850 2448 chr3R 1939008 1939061 chr3R 1939152 1939205 13 144 7.0 4.0 5.5 2.0 197 chr3R 1939008 intergenic not near genes chr3R 1939106 intergenic not near genes chr3R 1939205 intergenic not near genes chr3R_13_1935001 chr3R_1935001 RAL-850 2449 chr3R 2474449 2474465 chr3R 2474577 2474600 4 133 14.5 11.0 12.8 0.3 151 chr3R 2474449 intergenic not near genes chr3R 2474524 intergenic not near genes chr3R 2474600 intergenic not near genes chr3R_4_2470001 chr3R_2470001 RAL-850 2450 chr3R 2534120 2534156 chr3R 2541704 2541731 12 7606 35.0 12.5 23.8 0.5 7611 chr3R 2534120 intergenic not near genes chr3R 2537926 intergenic not near genes chr3R 2541731 intergenic not near genes chr3R_12_2535001 chr3R_2535001 RAL-850 2451 chr3R 3267259 3267277 chr3R 3267390 3267408 8 133 30.0 54.0 42.0 0.2 149 chr3R 3267259 intergenic not near genes chr3R 3267334 intergenic not near genes chr3R 3267408 intergenic not near genes chr3R_8_3265001 chr3R_3265001 RAL-850 2452 chr3R 3267251 3267325 chr3R 3267417 3267456 15 140 44.5 48.5 46.5 0.3 205 chr3R 3267251 intergenic not near genes chr3R 3267354 intergenic not near genes chr3R 3267456 intergenic not near genes chr3R_15_3265001 chr3R_3265001 RAL-850 2453 chr3R 3752703 3752731 chr3R 3752830 3752864 15 129 16.0 7.5 11.8 1.2 161 chr3R 3752703 intergenic CG41128 + chr3R 3752784 intergenic CG41128 + chr3R 3752864 intergenic not near genes chr3R_15_3750001 chr3R_3750001 RAL-850 2454 chr3R 3752732 3752755 chr3R 3752822 3752888 11 124 10.5 6.0 8.2 1.2 156 chr3R 3752732 intergenic CG41128 + chr3R 3752810 intergenic CG41128 + chr3R 3752888 intergenic not near genes chr3R_11_3750001 chr3R_3750001 RAL-850 2455 chr3R 4063761 4063792 chr3R 4069091 4069096 6 5325 16.0 26.5 21.2 0.3 5335 chr3R 4063761 intergenic not near genes chr3R 4066428 intergenic not near genes chr3R 4069096 intergenic not near genes chr3R_6_4065001 chr3R_4065001 RAL-850 2456 chr3R 4132852 4132926 chr3R 4133056 4133130 10 204 2.0 2.5 2.2 3.1 278 chr3R 4132852 intron Gfat1 + chr3R 4132991 intron Gfat1 + chr3R 4133130 intron Gfat1 + chr3R_10_4130001 chr3R_4130001 RAL-850 2457 chr3R 4206033 4206097 chr3R 4211648 4211722 mdg3 21 5624 8.0 5.0 6.5 2.8 5689 chr3R 4206033 intron CG14636 - chr3R 4208878 intron CG14636 - chr3R 4211722 intron CG14636 - chr3R_21_4205001 chr3R_4205001 RAL-850 2458 chr3R 4366716 4366782 chr3R 4375149 4375215 roo 23 8433 12.0 8.5 10.2 2.1 8499 chr3R 4366716 3` UTR CG1090 + chr3R 4370966 intergenic not near genes chr3R 4375215 5` UTR CR44922 + chr3R_23_4370001 chr3R_4370001 RAL-850 2459 chr3R 4408381 4408432 chr3R 4412735 4412786 Juan 22 4353 11.5 15.0 13.2 1.5 4405 chr3R 4408381 intron CG32944 - chr3R 4410584 intron CG32944 - chr3R 4412786 intron CG32944 - chr3R_22_4410001 chr3R_4410001 RAL-850 2460 chr3R 4479681 4479695 chr3R 4479808 4479822 6 127 9.0 9.0 9.0 0.6 141 chr3R 4479681 intergenic CG31523 - chr3R 4479752 intergenic not near genes chr3R 4479822 intergenic not near genes chr3R_6_4475001 chr3R_4475001 RAL-850 2461 chr3R 4609495 4609568 chr3R 4610709 4610781 1360 32 1213 11.5 14.0 12.8 2.3 1286 chr3R 4609495 intergenic not near genes chr3R 4610138 intergenic not near genes chr3R 4610781 intergenic not near genes chr3R_32_4610001 chr3R_4610001 RAL-850 2462 chr3R 4647883 4647957 chr3R 4648134 4648208 32 250 6.0 6.0 6.0 4.6 325 chr3R 4647883 exon,3` UTR rpk +,CR44155 - chr3R 4648046 exon,3` UTR rpk +,CR44155 - chr3R 4648208 3` UTR,3` UTR rpk +,CR44155 - chr3R_32_4645001 chr3R_4645001 RAL-850 2463 chr3R 4657230 4657260 chr3R 4657584 4657614 17 352 9.5 12.0 10.8 1.4 384 chr3R 4657230 intron spartin + chr3R 4657422 intron spartin + chr3R 4657614 exon spartin + chr3R_17_4655001 chr3R_4655001 RAL-850 2464 chr3R 4680663 4680731 chr3R 4680792 4680860 37 129 11.5 9.0 10.2 3.3 197 chr3R 4680663 intron CG43427 + chr3R 4680762 intron CG43427 + chr3R 4680860 intron CG43427 + chr3R_37_4680001 chr3R_4680001 RAL-850 2465 chr3R 4733630 4733699 chr3R 4733804 4733873 26 174 7.0 8.5 7.8 3.0 243 chr3R 4733630 intergenic not near genes chr3R 4733752 intergenic not near genes chr3R 4733873 intergenic not near genes chr3R_26_4730001 chr3R_4730001 RAL-850 2466 chr3R 4753204 4753261 chr3R 4757557 4757614 F-element 28 4350 10.0 14.0 12.0 2.2 4410 chr3R 4753204 intron,intron atms +,CG44098 - chr3R 4755409 intron,intron atms +,CG44098 - chr3R 4757614 intron,exon atms +,CG44098 - chr3R_28_4755001 chr3R_4755001 RAL-850 2467 chr3R 4759681 4759740 chr3R 4761228 4761276 hopper2 32 1545 10.0 16.0 13.0 2.3 1595 chr3R 4759681 intron,intron atms +,CG44098 - chr3R 4760478 intron,intron atms +,CG44098 - chr3R 4761276 intron,intron atms +,CG44098 - chr3R_32_4760001 chr3R_4760001 RAL-850 2468 chr3R 4769113 4769184 chr3R 4769240 4769312 18 128 10.5 12.5 11.5 1.4 199 chr3R 4769113 intron,intron atms +,CG44098 - chr3R 4769212 intron,intron atms +,CG44098 - chr3R 4769312 intron,intron atms +,CG44098 - chr3R_18_4765001 chr3R_4765001 RAL-850 2469 chr3R 4861520 4861532 chr3R 4861651 4861658 4 127 33.5 11.5 22.5 0.2 138 chr3R 4861520 intron opa + chr3R 4861589 intron opa + chr3R 4861658 intron opa + chr3R_4_4860001 chr3R_4860001 RAL-850 2470 chr3R 4861535 4861594 chr3R 4861650 4861725 31 126 10.5 11.0 10.8 2.6 190 chr3R 4861535 intron opa + chr3R 4861630 intron opa + chr3R 4861725 intron opa + chr3R_31_4860001 chr3R_4860001 RAL-850 2471 chr3R 4887431 4887505 chr3R 4894858 4894931 rover 27 7421 7.0 10.0 8.5 2.8 7500 chr3R 4887431 intergenic not near genes chr3R 4891181 intergenic not near genes chr3R 4894931 intergenic not near genes chr3R_27_4890001 chr3R_4890001 RAL-850 2472 chr3R 4896267 4896319 chr3R 4896395 4896462 13 141 4.5 6.5 5.5 2.0 195 chr3R 4896267 intergenic CR45580 + chr3R 4896364 intergenic CR45580 + chr3R 4896462 5` UTR CR45580 + chr3R_13_4895001 chr3R_4895001 RAL-850 2473 chr3R 4948333 4948392 chr3R 4949005 4949064 24 671 34.0 20.0 27.0 0.9 731 chr3R 4948333 intergenic snRNA:U1:82Eb -,UbcD6 - chr3R 4948698 intergenic UbcD6 - chr3R 4949064 3` UTR UbcD6 - chr3R_24_4945001 chr3R_4945001 RAL-850 2474 chr3R 4981383 4981439 chr3R 4981490 4981519 17 108 4.0 6.5 5.2 2.7 136 chr3R 4981383 intergenic not near genes chr3R 4981451 intergenic not near genes chr3R 4981519 intergenic CG14662 - chr3R_17_4980001 chr3R_4980001 RAL-850 2475 chr3R 4998352 4998376 chr3R 4998504 4998528 13 152 16.0 16.5 16.2 0.8 176 chr3R 4998352 intron CG2022 - chr3R 4998440 intron CG2022 - chr3R 4998528 intron CG2022 - chr3R_13_4995001 chr3R_4995001 RAL-850 2476 chr3R 5045799 5045871 chr3R 5052951 5053022 HMS-Beagle 32 7152 13.5 6.0 9.8 3.0 7223 chr3R 5045799 3` UTR CR43635 - chr3R 5049410 intergenic not near genes chr3R 5053022 intergenic CR45588 - chr3R_32_5045001 chr3R_5045001 RAL-850 2477 chr3R 5067939 5068008 chr3R 5073506 5073575 mdg3 27 5566 9.0 12.5 10.8 2.3 5636 chr3R 5067939 intergenic not near genes chr3R 5070757 intergenic not near genes chr3R 5073575 intergenic not near genes chr3R_27_5070001 chr3R_5070001 RAL-850 2478 chr3R 5105550 5105579 chr3R 5105630 5105685 8 95 12.5 5.0 8.8 0.8 135 chr3R 5105550 intergenic not near genes chr3R 5105618 intergenic not near genes chr3R 5105685 intergenic not near genes chr3R_8_5105001 chr3R_5105001 RAL-850 2479 chr3R 5236171 5236245 chr3R 5236349 5236423 29 177 5.5 8.5 7.0 3.6 252 chr3R 5236171 3` UTR,3` UTR Mms19 +,rtp - chr3R 5236297 3` UTR rtp - chr3R 5236423 exon rtp - chr3R_29_5235001 chr3R_5235001 RAL-850 2480 chr3R 5278045 5278055 chr3R 5278176 5278186 11 131 21.0 14.0 17.5 0.6 141 chr3R 5278045 intron mtd - chr3R 5278116 intron mtd - chr3R 5278186 intron mtd - chr3R_11_5275001 chr3R_5275001 RAL-850 2481 chr3R 5278057 5278069 chr3R 5278173 5278200 7 127 19.5 13.5 16.5 0.4 143 chr3R 5278057 intron mtd - chr3R 5278128 intron mtd - chr3R 5278200 intron mtd - chr3R_7_5275001 chr3R_5275001 RAL-850 2482 chr3R 5278070 5278078 chr3R 5278180 5278209 4 126 18.0 15.0 16.5 0.2 139 chr3R 5278070 intron mtd - chr3R 5278140 intron mtd - chr3R 5278209 intron mtd - chr3R_4_5275001 chr3R_5275001 RAL-850 2483 chr3R 5278080 5278112 chr3R 5278175 5278243 18 128 11.5 13.5 12.5 1.3 163 chr3R 5278080 intron mtd - chr3R 5278162 intron mtd - chr3R 5278243 intron mtd - chr3R_18_5275001 chr3R_5275001 RAL-850 2484 chr3R 5280141 5280159 chr3R 5280269 5280287 5 128 17.0 13.0 15.0 0.3 146 chr3R 5280141 intron mtd - chr3R 5280214 intron mtd - chr3R 5280287 intron mtd - chr3R_5_5280001 chr3R_5280001 RAL-850 2485 chr3R 5282944 5282994 chr3R 5283073 5283073 13 118 11.0 15.0 13.0 0.9 129 chr3R 5282944 intron mtd - chr3R 5283008 intron mtd - chr3R 5283073 intron mtd - chr3R_13_5280001 chr3R_5280001 RAL-850 2486 chr3R 5306087 5306154 chr3R 5306224 5306291 36 134 7.5 7.5 7.5 4.2 204 chr3R 5306087 intron mtd - chr3R 5306189 intron mtd - chr3R 5306291 intron mtd - chr3R_36_5305001 chr3R_5305001 RAL-850 2487 chr3R 5338354 5338408 chr3R 5343581 5343610 Rt1c 21 5225 16.0 15.5 15.8 1.2 5256 chr3R 5338354 intron mtd - chr3R 5340982 intron mtd - chr3R 5343610 intron mtd - chr3R_21_5340001 chr3R_5340001 RAL-850 2488 chr3R 5385934 5385991 chr3R 5386155 5386212 20 219 13.0 11.0 12.0 1.5 278 chr3R 5385934 intron kkv - chr3R 5386073 intron kkv - chr3R 5386212 intron kkv - chr3R_20_5385001 chr3R_5385001 RAL-850 2489 chr3R 5445919 5445989 chr3R 5452429 5452498 Burdock 22 6510 6.5 7.0 6.8 2.8 6579 chr3R 5445919 intron CG14669 + chr3R 5449208 intron CG14669 + chr3R 5452498 intron CG14669 + chr3R_22_5445001 chr3R_5445001 RAL-850 2490 chr3R 5627106 5627173 chr3R 5627567 5627627 24 458 9.0 9.5 9.2 2.4 521 chr3R 5627106 intergenic not near genes chr3R 5627366 intergenic CG31551 + chr3R 5627627 intergenic CG31551 + chr3R_24_5625001 chr3R_5625001 RAL-850 2491 chr3R 5680760 5680815 chr3R 5680879 5680949 26 133 5.5 11.5 8.5 2.7 189 chr3R 5680760 3` UTR Rab23 - chr3R 5680854 3` UTR Rab23 - chr3R 5680949 3` UTR Rab23 - chr3R_26_5680001 chr3R_5680001 RAL-850 2492 chr3R 5688740 5688805 chr3R 5688905 5688972 38 163 11.0 11.0 11.0 3.2 232 chr3R 5688740 intron plx + chr3R 5688856 intron plx + chr3R 5688972 intron plx + chr3R_38_5685001 chr3R_5685001 RAL-850 2493 chr3R 5745984 5746037 chr3R 5746254 5746328 pogo 18 288 4.5 8.5 6.5 2.4 344 chr3R 5745984 3` UTR Madm + chr3R 5746156 3` UTR Madm + chr3R 5746328 3` UTR Madm + chr3R_18_5745001 chr3R_5745001 RAL-850 2494 chr3R 5746971 5747034 chr3R 5753212 5753275 diver 28 6241 5.5 6.5 6.0 4.0 6304 chr3R 5746971 intergenic Madm + chr3R 5750123 intergenic not near genes chr3R 5753275 intergenic CG2091 - chr3R_28_5750001 chr3R_5750001 RAL-850 2495 chr3R 5769184 5769256 chr3R 5769332 5769404 25 147 7.5 9.0 8.2 2.7 220 chr3R 5769184 intron CG2082 - chr3R 5769294 intron CG2082 - chr3R 5769404 intron CG2082 - chr3R_25_5765001 chr3R_5765001 RAL-850 2496 chr3R 5809067 5809136 chr3R 5809367 5809436 pogo 30 299 10.5 8.0 9.2 2.9 369 chr3R 5809067 3` UTR CG11000 + chr3R 5809252 3` UTR CG11000 + chr3R 5809436 3` UTR CG11000 + chr3R_30_5805001 chr3R_5805001 RAL-850 2497 chr3R 5822340 5822401 chr3R 5823556 5823618 1360 29 1216 7.5 8.0 7.8 3.3 1278 chr3R 5822340 3` UTR CG2023 - chr3R 5822979 3` UTR CG2023 - chr3R 5823618 3` UTR CG2023 - chr3R_29_5820001 chr3R_5820001 RAL-850 2498 chr3R 5836158 5836180 chr3R 5836312 5836334 14 154 25.0 25.0 25.0 0.5 176 chr3R 5836158 exon,3` UTR CG1208 +,CR45192 - chr3R 5836246 intron CG1208 + chr3R 5836334 intron CG1208 + chr3R_14_5835001 chr3R_5835001 RAL-850 2499 chr3R 5927522 5927584 chr3R 5927799 5927845 pogo 17 285 7.0 11.0 9.0 1.7 323 chr3R 5927522 intron CG34113 - chr3R 5927684 intron CG34113 - chr3R 5927845 intron CG34113 - chr3R_17_5925001 chr3R_5925001 RAL-850 2500 chr3R 5931422 5931448 chr3R 5931560 5931586 9 137 6.0 11.0 8.5 0.9 164 chr3R 5931422 intron CG34113 - chr3R 5931504 intron CG34113 - chr3R 5931586 intron CG34113 - chr3R_9_5930001 chr3R_5930001 RAL-850 2501 chr3R 5945300 5945308 chr3R 5945421 5945433 4 126 9.5 25.5 17.5 0.2 133 chr3R 5945300 intron CG34113 - chr3R 5945366 intron CG34113 - chr3R 5945433 intron CG34113 - chr3R_4_5945001 chr3R_5945001 RAL-850 2502 chr3R 5988065 5988074 chr3R 5988199 5988208 5 134 21.0 11.0 16.0 0.3 143 chr3R 5988065 intergenic not near genes chr3R 5988136 intergenic not near genes chr3R 5988208 intergenic not near genes chr3R_5_5985001 chr3R_5985001 RAL-850 2503 chr3R 5988076 5988140 chr3R 5988198 5988273 28 132 7.5 10.5 9.0 2.8 197 chr3R 5988076 intergenic not near genes chr3R 5988174 intergenic not near genes chr3R 5988273 intergenic not near genes chr3R_28_5985001 chr3R_5985001 RAL-850 2504 chr3R 6015573 6015578 chr3R 6015677 6015713 5 129 1.0 24.5 12.8 0.4 140 chr3R 6015573 intergenic not near genes chr3R 6015643 intergenic not near genes chr3R 6015713 intergenic not near genes chr3R_5_6015001 chr3R_6015001 RAL-850 2505 chr3R 6015926 6015960 chr3R 6024455 6024491 Tirant 16 8522 14.5 5.0 9.8 1.5 8565 chr3R 6015926 intergenic not near genes chr3R 6020208 intergenic not near genes chr3R 6024491 intergenic not near genes chr3R_16_6020001 chr3R_6020001 RAL-850 2506 chr3R 6015961 6015994 chr3R 6024444 6024457 Tirant 13 8517 8.5 4.5 6.5 1.7 8496 chr3R 6015961 intergenic not near genes chr3R 6020209 intergenic not near genes chr3R 6024457 intergenic not near genes chr3R_13_6020001 chr3R_6020001 RAL-850 2507 chr3R 6101136 6101158 chr3R 6101264 6101283 7 138 12.0 5.5 8.8 0.7 147 chr3R 6101136 intergenic Gasp - chr3R 6101210 intergenic Gasp - chr3R 6101283 intergenic Gasp - chr3R_7_6100001 chr3R_6100001 RAL-850 2508 chr3R 6101161 6101186 chr3R 6101263 6101340 12 137 4.0 5.5 4.8 2.1 179 chr3R 6101161 intergenic Gasp - chr3R 6101250 intergenic Gasp - chr3R 6101340 intergenic Gasp - chr3R_12_6100001 chr3R_6100001 RAL-850 2509 chr3R 6121135 6121175 chr3R 6121370 6121443 BS 19 250 4.5 3.0 3.8 4.0 308 chr3R 6121135 intergenic not near genes chr3R 6121289 intergenic not near genes chr3R 6121443 intergenic not near genes chr3R_19_6120001 chr3R_6120001 RAL-850 2510 chr3R 6124185 6124252 chr3R 6124319 6124386 25 134 9.0 8.5 8.8 2.6 201 chr3R 6124185 3` UTR Vha14-2 + chr3R 6124286 3` UTR Vha14-2 + chr3R 6124386 3` UTR Vha14-2 + chr3R_25_6120001 chr3R_6120001 RAL-850 2511 chr3R 6158478 6158517 chr3R 6167110 6167130 Tirant 10 8630 18.0 7.5 12.8 0.7 8652 chr3R 6158478 intergenic not near genes chr3R 6162804 intergenic not near genes chr3R 6167130 intergenic CG1077 + chr3R_10_6160001 chr3R_6160001 RAL-850 2512 chr3R 6158521 6158539 chr3R 6167101 6167143 Tirant 13 8610 11.5 7.5 9.5 1.2 8622 chr3R 6158521 intergenic not near genes chr3R 6162832 intergenic not near genes chr3R 6167143 intergenic CG1077 + chr3R_13_6160001 chr3R_6160001 RAL-850 2513 chr3R 6175127 6175197 chr3R 6182449 6182519 HMS-Beagle2 25 7319 6.0 8.0 7.0 3.1 7392 chr3R 6175127 intergenic Osi1 + chr3R 6178823 intron CR45194 + chr3R 6182519 intergenic CR45194 + chr3R_25_6175001 chr3R_6175001 RAL-850 2514 chr3R 6187747 6187811 chr3R 6195474 6195547 22 7729 37.0 54.0 45.5 0.5 7800 chr3R 6187747 intron NPFR + chr3R 6191647 intron NPFR + chr3R 6195547 intergenic NPFR + chr3R_22_6190001 chr3R_6190001 RAL-850 2515 chr3R 6206251 6206306 chr3R 6206513 6206564 BS 25 265 8.5 11.0 9.8 2.3 313 chr3R 6206251 exon Osi24 + chr3R 6206408 intron Osi24 + chr3R 6206564 intron Osi24 + chr3R_25_6205001 chr3R_6205001 RAL-850 2516 chr3R 6222273 6222281 chr3R 6222404 6222412 6 131 12.0 10.0 11.0 0.5 139 chr3R 6222273 intergenic Osi4 - chr3R 6222342 intergenic not near genes chr3R 6222412 intergenic not near genes chr3R_6_6220001 chr3R_6220001 RAL-850 2517 chr3R 6222282 6222336 chr3R 6222394 6222466 15 130 5.0 6.5 5.8 2.2 184 chr3R 6222282 intergenic not near genes chr3R 6222374 intergenic not near genes chr3R 6222466 intergenic not near genes chr3R_15_6220001 chr3R_6220001 RAL-850 2518 chr3R 6365330 6365347 chr3R 6365472 6365489 7 141 7.0 18.0 12.5 0.5 159 chr3R 6365330 intron CG42724 - chr3R 6365410 intron CG42724 - chr3R 6365489 intron CG42724 - chr3R_7_6365001 chr3R_6365001 RAL-850 2519 chr3R 6428773 6428835 chr3R 6428925 6428987 19 152 4.0 9.5 6.8 2.4 214 chr3R 6428773 intron gpp + chr3R 6428880 intron gpp + chr3R 6428987 intron gpp + chr3R_19_6425001 chr3R_6425001 RAL-850 2520 chr3R 6444780 6444834 chr3R 6444902 6444961 17 126 15.0 11.0 13.0 1.2 181 chr3R 6444780 intron gpp + chr3R 6444870 intron gpp + chr3R 6444961 intron gpp + chr3R_17_6440001 chr3R_6440001 RAL-850 2521 chr3R 6461547 6461602 chr3R 6461677 6461731 59 130 18.5 17.5 18.0 3.1 184 chr3R 6461547 intergenic not near genes chr3R 6461639 intergenic not near genes chr3R 6461731 intergenic not near genes chr3R_59_6460001 chr3R_6460001 RAL-850 2522 chr3R 6479926 6479959 chr3R 6480017 6480085 4 113 6.5 6.5 6.5 0.5 159 chr3R 6479926 intron CG15186 + chr3R 6480006 intron CG15186 + chr3R 6480085 intron CG15186 + chr3R_4_6475001 chr3R_6475001 RAL-850 2523 chr3R 6509984 6510047 chr3R 6515115 6515178 jockey 20 5129 11.5 10.5 11.0 1.7 5194 chr3R 6509984 intergenic not near genes chr3R 6512581 intergenic not near genes chr3R 6515178 intergenic not near genes chr3R_20_6510001 chr3R_6510001 RAL-850 2524 chr3R 6523273 6523339 chr3R 6523699 6523765 18 425 5.5 6.5 6.0 2.6 492 chr3R 6523273 intergenic not near genes chr3R 6523519 intergenic not near genes chr3R 6523765 intergenic not near genes chr3R_18_6520001 chr3R_6520001 RAL-850 2525 chr3R 6532076 6532128 chr3R 6532488 6532552 19 423 7.0 11.0 9.0 1.9 476 chr3R 6532076 intron dpr11 - chr3R 6532314 intron dpr11 - chr3R 6532552 intron dpr11 - chr3R_19_6530001 chr3R_6530001 RAL-850 2526 chr3R 6561907 6561973 chr3R 6562041 6562107 14 132 6.0 7.5 6.8 1.8 200 chr3R 6561907 intron dpr11 - chr3R 6562007 intron dpr11 - chr3R 6562107 intron dpr11 - chr3R_14_6560001 chr3R_6560001 RAL-850 2527 chr3R 6639859 6639934 chr3R 6639987 6640066 28 125 5.5 0.0 2.8 7.4 207 chr3R 6639859 intergenic not near genes chr3R 6639962 intergenic not near genes chr3R 6640066 intergenic not near genes chr3R_28_6635001 chr3R_6635001 RAL-850 2528 chr3R 6689296 6689302 chr3R 6689428 6689434 5 132 17.5 2.5 10.0 0.5 138 chr3R 6689296 intergenic Ccp84Af - chr3R 6689365 intergenic Ccp84Af - chr3R 6689434 intergenic Ccp84Af - chr3R_5_6685001 chr3R_6685001 RAL-850 2529 chr3R 6689304 6689367 chr3R 6689421 6689499 33 126 5.0 3.0 4.0 6.6 195 chr3R 6689304 intergenic Ccp84Af - chr3R 6689402 intergenic Ccp84Af - chr3R 6689499 intergenic Ccp84Af - chr3R_33_6685001 chr3R_6685001 RAL-850 2530 chr3R 6693597 6693665 chr3R 6693734 6693802 11 137 9.0 4.5 6.8 1.4 205 chr3R 6693597 intergenic Ccp84Ad + chr3R 6693700 intergenic Ccp84Ad + chr3R 6693802 intergenic Ccp84Ad + chr3R_11_6690001 chr3R_6690001 RAL-850 2531 chr3R 6705627 6705714 chr3R 6705908 6705932 11 272 0.0 5.0 2.5 3.1 305 chr3R 6705627 intergenic not near genes chr3R 6705780 intergenic not near genes chr3R 6705932 intergenic not near genes chr3R_11_6705001 chr3R_6705001 RAL-850 2532 chr3R 6725118 6725189 chr3R 6725303 6725348 34 182 8.5 10.0 9.2 3.3 230 chr3R 6725118 intron pb - chr3R 6725233 intron pb - chr3R 6725348 intron pb - chr3R_34_6725001 chr3R_6725001 RAL-850 2533 chr3R 6737451 6737486 chr3R 6739288 6739317 Doc 7 1826 19.0 9.5 14.2 0.5 1866 chr3R 6737451 intron pb - chr3R 6738384 intron pb - chr3R 6739317 intron pb - chr3R_7_6735001 chr3R_6735001 RAL-850 2534 chr3R 6737488 6737531 chr3R 6739285 6739299 Doc 17 1821 5.0 7.0 6.0 2.4 1811 chr3R 6737488 intron pb - chr3R 6738394 intron pb - chr3R 6739299 intron pb - chr3R_17_6735001 chr3R_6735001 RAL-850 2535 chr3R 6759550 6759625 chr3R 6759677 6759752 24 125 7.0 8.0 7.5 2.8 202 chr3R 6759550 intergenic bcd - chr3R 6759651 intergenic bcd - chr3R 6759752 intergenic bcd - chr3R_24_6755001 chr3R_6755001 RAL-850 2536 chr3R 6827980 6828032 chr3R 6828106 6828158 21 126 4.5 5.0 4.8 3.6 178 chr3R 6827980 intron Scr - chr3R 6828069 intron Scr - chr3R 6828158 intron Scr - chr3R_21_6825001 chr3R_6825001 RAL-850 2537 chr3R 6856337 6856398 chr3R 6856504 6856565 15 167 7.5 5.0 6.2 2.1 228 chr3R 6856337 intergenic not near genes chr3R 6856451 intergenic not near genes chr3R 6856565 intergenic not near genes chr3R_15_6855001 chr3R_6855001 RAL-850 2538 chr3R 6862175 6862184 chr3R 6862312 6862321 5 137 16.5 6.5 11.5 0.4 146 chr3R 6862175 intergenic not near genes chr3R 6862248 intergenic not near genes chr3R 6862321 intergenic not near genes chr3R_5_6860001 chr3R_6860001 RAL-850 2539 chr3R 6862185 6862237 chr3R 6862311 6862374 18 136 8.5 6.5 7.5 2.1 189 chr3R 6862185 intergenic not near genes chr3R 6862280 intergenic not near genes chr3R 6862374 intergenic not near genes chr3R_18_6860001 chr3R_6860001 RAL-850 2540 chr3R 6891241 6891263 chr3R 6891346 6891389 5 122 5.5 12.5 9.0 0.5 148 chr3R 6891241 intergenic not near genes chr3R 6891315 intergenic not near genes chr3R 6891389 intergenic not near genes chr3R_5_6890001 chr3R_6890001 RAL-850 2541 chr3R 6900699 6900720 chr3R 6900826 6900847 10 126 17.5 22.0 19.8 0.5 148 chr3R 6900699 intron Antp - chr3R 6900773 intron Antp - chr3R 6900847 intron Antp - chr3R_10_6900001 chr3R_6900001 RAL-850 2542 chr3R 6912057 6912133 chr3R 6912213 6912294 25 159 8.0 3.5 5.8 3.7 237 chr3R 6912057 intron Antp - chr3R 6912176 intron Antp - chr3R 6912294 intron Antp - chr3R_25_6910001 chr3R_6910001 RAL-850 2543 chr3R 6961143 6961173 chr3R 6961272 6961302 6 129 14.0 15.5 14.8 0.4 159 chr3R 6961143 intron Antp - chr3R 6961222 intron Antp - chr3R 6961302 intron Antp - chr3R_6_6960001 chr3R_6960001 RAL-850 2544 chr3R 6961175 6961195 chr3R 6961260 6961278 9 114 11.5 15.0 13.2 0.6 103 chr3R 6961175 intron Antp - chr3R 6961226 intron Antp - chr3R 6961278 intron Antp - chr3R_9_6960001 chr3R_6960001 RAL-850 2545 chr3R 7026826 7026882 chr3R 7026948 7027018 25 131 9.0 6.0 7.5 2.9 192 chr3R 7026826 intergenic not near genes chr3R 7026922 intergenic not near genes chr3R 7027018 intergenic not near genes chr3R_25_7025001 chr3R_7025001 RAL-850 2546 chr3R 7036723 7036787 chr3R 7036852 7036916 21 129 5.0 9.5 7.2 2.6 193 chr3R 7036723 intergenic not near genes chr3R 7036820 intergenic not near genes chr3R 7036916 intergenic not near genes chr3R_21_7035001 chr3R_7035001 RAL-850 2547 chr3R 7060221 7060254 chr3R 7060352 7060375 6 129 6.5 3.5 5.0 1.0 154 chr3R 7060221 3` UTR dj + chr3R 7060298 3` UTR dj + chr3R 7060375 3` UTR dj + chr3R_6_7060001 chr3R_7060001 RAL-850 2548 chr3R 7092742 7092768 chr3R 7093356 7093382 10 614 24.5 11.5 18.0 0.5 640 chr3R 7092742 3` UTR CR43685 - chr3R 7093062 intron CR43685 - chr3R 7093382 3` UTR CR43685 - chr3R_10_7090001 chr3R_7090001 RAL-850 2549 chr3R 7092769 7092810 chr3R 7093355 7093418 24 607 8.5 11.5 10.0 2.2 649 chr3R 7092769 3` UTR CR43685 - chr3R 7093094 intron CR43685 - chr3R 7093418 3` UTR CR43685 - chr3R_24_7090001 chr3R_7090001 RAL-850 2550 chr3R 7103236 7103313 chr3R 7103361 7103409 10 109 11.0 12.0 11.5 0.8 173 chr3R 7103236 intron Alh - chr3R 7103322 intron Alh - chr3R 7103409 intron Alh - chr3R_10_7100001 chr3R_7100001 RAL-850 2551 chr3R 7126474 7126529 chr3R 7126619 7126674 28 145 7.0 14.0 10.5 2.4 200 chr3R 7126474 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126574 3` UTR CG10068 - chr3R 7126674 3` UTR CG10068 - chr3R_28_7125001 chr3R_7125001 RAL-850 2552 chr3R 7173635 7173699 chr3R 7173764 7173829 23 129 7.0 4.0 5.5 3.5 194 chr3R 7173635 intron sas + chr3R 7173732 intron sas + chr3R 7173829 intron sas + chr3R_23_7170001 chr3R_7170001 RAL-850 2553 chr3R 7206839 7206898 chr3R 7206967 7206972 29 126 0.5 11.0 5.8 4.3 133 chr3R 7206839 intergenic not near genes chr3R 7206906 intergenic CG1288 - chr3R 7206972 intergenic CG1288 - chr3R_29_7205001 chr3R_7205001 RAL-850 2554 chr3R 7372953 7373011 chr3R 7373082 7373136 20 119 13.0 9.0 11.0 1.7 183 chr3R 7372953 intergenic not near genes chr3R 7373044 intergenic not near genes chr3R 7373136 intergenic not near genes chr3R_20_7370001 chr3R_7370001 RAL-850 2555 chr3R 7385557 7385616 chr3R 7385662 7385701 21 100 10.5 15.0 12.8 1.5 144 chr3R 7385557 intergenic not near genes chr3R 7385629 intergenic not near genes chr3R 7385701 intergenic not near genes chr3R_21_7385001 chr3R_7385001 RAL-850 2556 chr3R 7436489 7436516 chr3R 7436623 7436650 INE-1 10 134 14.5 5.5 10.0 0.9 161 chr3R 7436489 intergenic not near genes chr3R 7436570 intergenic not near genes chr3R 7436650 intergenic not near genes chr3R_10_7435001 chr3R_7435001 RAL-850 2557 chr3R 7447949 7447999 chr3R 7448075 7448127 14 128 11.5 11.5 11.5 1.1 178 chr3R 7447949 intergenic not near genes chr3R 7448038 intergenic not near genes chr3R 7448127 intergenic not near genes chr3R_14_7445001 chr3R_7445001 RAL-850 2558 chr3R 7464648 7464719 chr3R 7464782 7464845 20 129 5.0 2.5 3.8 4.2 197 chr3R 7464648 intergenic not near genes chr3R 7464746 intergenic not near genes chr3R 7464845 intergenic not near genes chr3R_20_7460001 chr3R_7460001 RAL-850 2559 chr3R 7552919 7552989 chr3R 7553057 7553122 23 137 10.0 9.5 9.8 2.1 203 chr3R 7552919 intergenic not near genes chr3R 7553020 intergenic not near genes chr3R 7553122 intergenic not near genes chr3R_23_7550001 chr3R_7550001 RAL-850 2560 chr3R 7677865 7677943 chr3R 7678028 7678106 30 161 4.0 6.5 5.2 4.8 241 chr3R 7677865 intron Nlg1 + chr3R 7677986 intron Nlg1 + chr3R 7678106 intron Nlg1 + chr3R_30_7675001 chr3R_7675001 RAL-850 2561 chr3R 7680811 7680873 chr3R 7681474 7681554 12 667 5.5 3.0 4.2 2.3 743 chr3R 7680811 intron Nlg1 + chr3R 7681182 intron Nlg1 + chr3R 7681554 intron Nlg1 + chr3R_12_7680001 chr3R_7680001 RAL-850 2562 chr3R 7694533 7694606 chr3R 7713644 7713704 invader3 25 19110 7.5 5.5 6.5 3.3 19171 chr3R 7694533 3` UTR Nlg1 + chr3R 7704118 intergenic not near genes chr3R 7713704 intergenic not near genes chr3R_25_7700001 chr3R_7700001 RAL-850 2563 chr3R 7729423 7729489 chr3R 7737411 7737477 Stalker2 25 7987 10.0 11.0 10.5 2.2 8054 chr3R 7729423 intergenic not near genes chr3R 7733450 intergenic not near genes chr3R 7737477 intergenic not near genes chr3R_25_7730001 chr3R_7730001 RAL-850 2564 chr3R 7772228 7772257 chr3R 7772526 7772555 13 296 8.0 9.5 8.8 1.3 327 chr3R 7772228 intergenic CG11286 - chr3R 7772392 intergenic not near genes chr3R 7772555 intergenic not near genes chr3R_13_7770001 chr3R_7770001 RAL-850 2565 chr3R 7772259 7772288 chr3R 7772525 7772566 12 290 4.0 9.5 6.8 1.5 307 chr3R 7772259 intergenic not near genes chr3R 7772412 intergenic not near genes chr3R 7772566 intergenic not near genes chr3R_12_7770001 chr3R_7770001 RAL-850 2566 chr3R 7953617 7953691 chr3R 7953754 7953828 42 137 7.0 3.5 5.2 6.8 211 chr3R 7953617 intron dsx - chr3R 7953722 intron dsx - chr3R 7953828 intron dsx - chr3R_42_7950001 chr3R_7950001 RAL-850 2567 chr3R 7956584 7956657 chr3R 7956727 7956800 40 142 6.0 6.5 6.2 5.6 216 chr3R 7956584 intron dsx - chr3R 7956692 intron dsx - chr3R 7956800 intron dsx - chr3R_40_7955001 chr3R_7955001 RAL-850 2568 chr3R 7973285 7973326 chr3R 7974397 7974438 1360 12 1112 10.0 11.0 10.5 1.0 1153 chr3R 7973285 intergenic not near genes chr3R 7973862 intergenic not near genes chr3R 7974438 3` UTR CD98hc - chr3R_12_7970001 chr3R_7970001 RAL-850 2569 chr3R 8038287 8038297 chr3R 8038420 8038430 4 132 15.0 23.5 19.2 0.2 143 chr3R 8038287 5` UTR CR44936 + chr3R 8038358 5` UTR CR44936 + chr3R 8038430 5` UTR CR44936 + chr3R_4_8035001 chr3R_8035001 RAL-850 2570 chr3R 8049344 8049388 chr3R 8049582 8049624 24 235 9.0 20.5 14.8 1.5 280 chr3R 8049344 intron,intron CG43060 +,CG43618 + chr3R 8049484 intron CG43060 + chr3R 8049624 intron CG43060 + chr3R_24_8045001 chr3R_8045001 RAL-850 2571 chr3R 8075987 8076055 chr3R 8076218 8076286 35 227 5.0 4.5 4.8 6.0 299 chr3R 8075987 intron mAChR-B + chr3R 8076136 intron mAChR-B + chr3R 8076286 intron mAChR-B + chr3R_35_8075001 chr3R_8075001 RAL-850 2572 chr3R 8090222 8090298 chr3R 8090449 8090524 39 226 7.0 7.0 7.0 4.9 302 chr3R 8090222 5` UTR CR44330 + chr3R 8090373 intergenic CR44330 + chr3R 8090524 intergenic CR44330 + chr3R_39_8090001 chr3R_8090001 RAL-850 2573 chr3R 8090515 8090558 chr3R 8094042 8094085 297 14 3526 8.5 13.0 10.8 1.2 3570 chr3R 8090515 intergenic CR44330 + chr3R 8092300 intergenic not near genes chr3R 8094085 intergenic CG7900 + chr3R_14_8090001 chr3R_8090001 RAL-850 2574 chr3R 8094365 8094423 chr3R 8099720 8099778 Transpac 22 5355 9.0 5.5 7.2 2.7 5413 chr3R 8094365 intron CG7900 + chr3R 8097072 intron CG7900 + chr3R 8099778 intron CG7900 + chr3R_22_8095001 chr3R_8095001 RAL-850 2575 chr3R 8101718 8101785 chr3R 8104851 8104914 G2 20 3132 6.0 6.5 6.2 2.8 3196 chr3R 8101718 exon CG7900 + chr3R 8103316 intron CG7900 + chr3R 8104914 3` UTR CG7900 + chr3R_20_8100001 chr3R_8100001 RAL-850 2576 chr3R 8107345 8107410 chr3R 8107529 8107594 19 184 5.5 8.0 6.8 2.4 249 chr3R 8107345 intron puc + chr3R 8107470 intron puc + chr3R 8107594 intron puc + chr3R_19_8105001 chr3R_8105001 RAL-850 2577 chr3R 8207510 8207521 chr3R 8208406 8208416 F-element 5 895 21.5 8.0 14.8 0.3 906 chr3R 8207510 intergenic not near genes chr3R 8207963 intergenic not near genes chr3R 8208416 intergenic not near genes chr3R_5_8205001 chr3R_8205001 RAL-850 2578 chr3R 8207531 8207581 chr3R 8208401 8208476 F-element 21 890 6.0 5.5 5.8 3.1 945 chr3R 8207531 intergenic not near genes chr3R 8208004 intergenic not near genes chr3R 8208476 intergenic not near genes chr3R_21_8205001 chr3R_8205001 RAL-850 2579 chr3R 8247852 8247922 chr3R 8247984 8248054 47 132 19.5 13.0 16.2 2.7 202 chr3R 8247852 3` UTR,3` UTR CG18749 +,CG33722 + chr3R 8247953 3` UTR,3` UTR CG18749 +,CG33722 + chr3R 8248054 3` UTR,3` UTR CG18749 +,CG33722 + chr3R_47_8245001 chr3R_8245001 RAL-850 2580 chr3R 8287385 8287386 chr3R 22081601 22081602 6 13794216 31.5 10.0 20.8 0.3 13794217 chr3R 8287385 intron CR44318 + chr3R 15184494 intron Gyc88E + chr3R 22081602 intron CG13408 + chr3R_6_15180001 chr3R_15180001 RAL-850 2581 chr3R 8339246 8339247 chr3R 21907534 21907536 20 13568289 27.5 40.0 33.8 0.6 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_20_15120001 chr3R_15120001 RAL-850 2582 chr3R 8402968 8402973 chr3R 8412184 8412189 roo 4 9216 25.0 7.0 16.0 0.2 9221 chr3R 8402968 intron CG45263 - chr3R 8407578 intron CG45263 - chr3R 8412189 intron CG45263 - chr3R_4_8405001 chr3R_8405001 RAL-850 2583 chr3R 8402975 8403029 chr3R 8412181 8412234 roo 30 9209 10.0 7.0 8.5 3.2 9259 chr3R 8402975 intron CG45263 - chr3R 8407604 intron CG45263 - chr3R 8412234 intron CG45263 - chr3R_30_8405001 chr3R_8405001 RAL-850 2584 chr3R 8460211 8460223 chr3R 8460338 8460344 7 126 24.0 15.5 19.8 0.3 133 chr3R 8460211 intron CG45263 - chr3R 8460278 intron CG45263 - chr3R 8460344 intron CG45263 - chr3R_7_8460001 chr3R_8460001 RAL-850 2585 chr3R 8460226 8460267 chr3R 8460336 8460379 19 119 16.5 16.0 16.2 1.1 153 chr3R 8460226 intron CG45263 - chr3R 8460302 intron CG45263 - chr3R 8460379 intron CG45263 - chr3R_19_8460001 chr3R_8460001 RAL-850 2586 chr3R 8552323 8552349 chr3R 8552453 8552464 7 126 26.5 9.5 18.0 0.4 141 chr3R 8552323 intergenic Or85d + chr3R 8552394 intergenic Or85d + chr3R 8552464 intergenic Or85d + chr3R_7_8550001 chr3R_8550001 RAL-850 2587 chr3R 8552350 8552356 chr3R 8552450 8552486 4 121 25.5 8.5 17.0 0.2 136 chr3R 8552350 intergenic Or85d + chr3R 8552418 intergenic Or85d + chr3R 8552486 intergenic Or85d + chr3R_4_8550001 chr3R_8550001 RAL-850 2588 chr3R 8552358 8552390 chr3R 8552446 8552520 16 123 16.0 10.0 13.0 1.1 162 chr3R 8552358 intergenic Or85d + chr3R 8552439 intergenic Or85d + chr3R 8552520 intergenic Or85d + chr3R_16_8550001 chr3R_8550001 RAL-850 2589 chr3R 8555509 8555556 chr3R 8555712 8555778 19 215 9.0 8.0 8.5 2.0 269 chr3R 8555509 intergenic not near genes chr3R 8555644 intergenic not near genes chr3R 8555778 intergenic not near genes chr3R_19_8555001 chr3R_8555001 RAL-850 2590 chr3R 8570438 8570504 chr3R 8575124 8575180 HMS-Beagle 24 4682 12.0 10.0 11.0 2.0 4742 chr3R 8570438 intergenic not near genes chr3R 8572809 intergenic not near genes chr3R 8575180 intergenic not near genes chr3R_24_8570001 chr3R_8570001 RAL-850 2591 chr3R 8601732 8601765 chr3R 8610935 8610968 roo 16 9202 14.5 9.0 11.8 1.2 9236 chr3R 8601732 intron 5-HT2B + chr3R 8606350 intron 5-HT2B + chr3R 8610968 intron 5-HT2B + chr3R_16_8605001 chr3R_8605001 RAL-850 2592 chr3R 8601767 8601794 chr3R 8610932 8610997 roo 8 9194 6.0 8.5 7.2 1.0 9230 chr3R 8601767 intron 5-HT2B + chr3R 8606382 intron 5-HT2B + chr3R 8610997 intron 5-HT2B + chr3R_8_8605001 chr3R_8605001 RAL-850 2593 chr3R 8685245 8685313 chr3R 8685395 8685463 21 150 5.0 6.5 5.8 3.1 218 chr3R 8685245 intron CR44937 - chr3R 8685354 intron CR44937 - chr3R 8685463 intron CR44937 - chr3R_21_8685001 chr3R_8685001 RAL-850 2594 chr3R 8707314 8707370 chr3R 8709799 8709861 jockey 23 2490 15.0 9.5 12.2 1.7 2547 chr3R 8707314 intergenic not near genes chr3R 8708588 intergenic not near genes chr3R 8709861 intergenic not near genes chr3R_23_8705001 chr3R_8705001 RAL-850 2595 chr3R 8760544 8760613 chr3R 8760679 8760747 21 121 13.0 14.0 13.5 1.4 203 chr3R 8760544 intron,intron CG11768 -,CG34135 - chr3R 8760646 intron,intron CG11768 -,CG34135 - chr3R 8760747 intron,intron CG11768 -,CG34135 - chr3R_21_8760001 chr3R_8760001 RAL-850 2596 chr3R 8798602 8798682 chr3R 8798736 8798805 32 132 7.0 6.0 6.5 4.3 203 chr3R 8798602 intron,intron Pif1A -,Pif1B - chr3R 8798704 intron,intron Pif1A -,Pif1B - chr3R 8798805 intron,intron Pif1A -,Pif1B - chr3R_32_8795001 chr3R_8795001 RAL-850 2597 chr3R 8811187 8811254 chr3R 8811328 8811396 26 139 1.5 4.0 2.8 6.8 209 chr3R 8811187 intron CG9837 - chr3R 8811292 intron CG9837 - chr3R 8811396 intron CG9837 - chr3R_26_8810001 chr3R_8810001 RAL-850 2598 chr3R 8898183 8898213 chr3R 8913813 8913845 297 9 15625 15.5 7.0 11.2 0.7 15662 chr3R 8898183 intron pyd - chr3R 8906014 intron pyd - chr3R 8913845 intron pyd - chr3R_9_8905001 chr3R_8905001 RAL-850 2599 chr3R 8917848 8917911 chr3R 8917978 8918041 27 129 5.5 8.0 6.8 3.5 193 chr3R 8917848 intron pyd - chr3R 8917944 intron pyd - chr3R 8918041 intron pyd - chr3R_27_8915001 chr3R_8915001 RAL-850 2600 chr3R 8918162 8918183 chr3R 8918304 8918323 10 141 21.5 9.5 15.5 0.6 161 chr3R 8918162 intron pyd - chr3R 8918242 intron pyd - chr3R 8918323 intron pyd - chr3R_10_8915001 chr3R_8915001 RAL-850 2601 chr3R 8918184 8918233 chr3R 8918301 8918375 16 138 11.5 8.0 9.8 1.5 191 chr3R 8918184 intron pyd - chr3R 8918280 intron pyd - chr3R 8918375 intron pyd - chr3R_16_8915001 chr3R_8915001 RAL-850 2602 chr3R 8993375 8993441 chr3R 8993506 8993557 27 122 8.0 4.0 6.0 3.9 182 chr3R 8993375 5` UTR CG11975 + chr3R 8993466 intron CG11975 + chr3R 8993557 exon CG11975 + chr3R_27_8990001 chr3R_8990001 RAL-850 2603 chr3R 9036662 9036735 chr3R 9036808 9036881 27 145 8.5 5.5 7.0 3.4 219 chr3R 9036662 intron neur - chr3R 9036772 intron neur - chr3R 9036881 intron neur - chr3R_27_9035001 chr3R_9035001 RAL-850 2604 chr3R 9101800 9101861 chr3R 9101948 9102009 25 147 7.0 10.0 8.5 2.6 209 chr3R 9101800 intron pum - chr3R 9101904 intron pum - chr3R 9102009 intron pum - chr3R_25_9100001 chr3R_9100001 RAL-850 2605 chr3R 9108823 9108884 chr3R 9108949 9109010 28 126 8.5 3.5 6.0 4.0 187 chr3R 9108823 intron pum - chr3R 9108916 intron pum - chr3R 9109010 intron pum - chr3R_28_9105001 chr3R_9105001 RAL-850 2606 chr3R 9149403 9149428 chr3R 9149533 9149558 6 130 9.0 0.5 4.8 1.0 155 chr3R 9149403 intron pum - chr3R 9149480 intron pum - chr3R 9149558 intron pum - chr3R_6_9145001 chr3R_9145001 RAL-850 2607 chr3R 9192011 9192053 chr3R 9192146 9192188 25 133 12.0 11.0 11.5 2.0 177 chr3R 9192011 intron pum - chr3R 9192100 intron pum - chr3R 9192188 intron pum - chr3R_25_9190001 chr3R_9190001 RAL-850 2608 chr3R 9204199 9204276 chr3R 9204336 9204408 42 132 11.5 4.5 8.0 4.7 209 chr3R 9204199 intron pum - chr3R 9204304 intron pum - chr3R 9204408 intron pum - chr3R_42_9200001 chr3R_9200001 RAL-850 2609 chr3R 9319535 9319599 chr3R 9320020 9320079 jockey 36 484 9.5 12.0 10.8 3.1 544 chr3R 9319535 intron CG8861 - chr3R 9319807 intron CG8861 - chr3R 9320079 intron CG8861 - chr3R_36_9315001 chr3R_9315001 RAL-850 2610 chr3R 9361804 9361837 chr3R 9362094 9362128 pogo 16 291 10.5 12.0 11.2 1.3 324 chr3R 9361804 3` UTR CG45050 + chr3R 9361966 3` UTR CG45050 + chr3R 9362128 3` UTR CG45050 + chr3R_16_9360001 chr3R_9360001 RAL-850 2611 chr3R 9382772 9382838 chr3R 9382947 9383013 30 174 8.0 7.5 7.8 3.4 241 chr3R 9382772 intron FER - chr3R 9382892 intron FER - chr3R 9383013 intron FER - chr3R_30_9380001 chr3R_9380001 RAL-850 2612 chr3R 9600750 9600802 chr3R 9600890 9600921 5 139 12.0 9.0 10.5 0.4 171 chr3R 9600750 intron CG8312 + chr3R 9600836 intron CG8312 + chr3R 9600921 intron CG8312 + chr3R_5_9600001 chr3R_9600001 RAL-850 2613 chr3R 9611833 9611863 chr3R 9611965 9611995 19 132 17.5 0.0 8.8 1.9 162 chr3R 9611833 intron CG8312 + chr3R 9611914 intron CG8312 + chr3R 9611995 intron CG8312 + chr3R_19_9610001 chr3R_9610001 RAL-850 2614 chr3R 9620956 9620956 chr3R 21907534 21907536 8 12286579 18.0 40.0 29.0 0.3 12286580 chr3R 9620956 intron CG8312 + chr3R 15764246 intergenic not near genes chr3R 21907536 intergenic CG6678 + chr3R_8_15760001 chr3R_15760001 RAL-850 2615 chr3R 9644535 9644610 chr3R 9644666 9644741 32 131 9.0 10.5 9.8 3.0 206 chr3R 9644535 intron Dh44 + chr3R 9644638 intron Dh44 + chr3R 9644741 intron Dh44 + chr3R_32_9640001 chr3R_9640001 RAL-850 2616 chr3R 9684072 9684085 chr3R 9684203 9684215 4 130 28.5 9.5 19.0 0.2 143 chr3R 9684072 5` UTR CG9444 - chr3R 9684144 5` UTR CG9444 - chr3R 9684215 5` UTR CG9444 - chr3R_4_9680001 chr3R_9680001 RAL-850 2617 chr3R 9684086 9684142 chr3R 9684198 9684248 34 130 7.0 8.0 7.5 4.0 162 chr3R 9684086 5` UTR CG9444 - chr3R 9684167 5` UTR CG9444 - chr3R 9684248 5` UTR CG9444 - chr3R_34_9680001 chr3R_9680001 RAL-850 2618 chr3R 9702241 9702288 chr3R 9702351 9702363 8 108 13.5 13.0 13.2 0.6 122 chr3R 9702241 intron Unc-115a - chr3R 9702302 intron Unc-115a - chr3R 9702363 intron Unc-115a - chr3R_8_9700001 chr3R_9700001 RAL-850 2619 chr3R 9891420 9891483 chr3R 9891610 9891643 14 187 6.0 0.5 3.2 3.3 223 chr3R 9891420 intron Glut4EF + chr3R 9891532 intron Glut4EF + chr3R 9891643 intron Glut4EF + chr3R_14_9890001 chr3R_9890001 RAL-850 2620 chr3R 9893244 9893302 chr3R 9893634 9893649 15 394 6.0 0.0 3.0 3.8 405 chr3R 9893244 intron Glut4EF + chr3R 9893446 intron Glut4EF + chr3R 9893649 intron Glut4EF + chr3R_15_9890001 chr3R_9890001 RAL-850 2621 chr3R 9898738 9898815 chr3R 9898879 9898957 30 140 7.0 10.0 8.5 3.2 219 chr3R 9898738 intron Glut4EF + chr3R 9898848 intron Glut4EF + chr3R 9898957 intron Glut4EF + chr3R_30_9895001 chr3R_9895001 RAL-850 2622 chr3R 9920801 9920809 chr3R 9920948 9920956 4 147 8.5 20.0 14.2 0.3 155 chr3R 9920801 intron Glut4EF + chr3R 9920878 intron Glut4EF + chr3R 9920956 intron Glut4EF + chr3R_4_9920001 chr3R_9920001 RAL-850 2623 chr3R 9956056 9956097 chr3R 9956415 9956422 6 364 9.0 0.5 4.8 1.0 366 chr3R 9956056 intron Glut4EF + chr3R 9956239 intron Glut4EF + chr3R 9956422 intron Glut4EF + chr3R_6_9955001 chr3R_9955001 RAL-850 2624 chr3R 10073729 10073796 chr3R 10073888 10073935 24 158 5.0 5.0 5.0 4.0 206 chr3R 10073729 3` UTR nerfin-2 + chr3R 10073832 3` UTR CG5361 - chr3R 10073935 exon CG5361 - chr3R_24_10070001 chr3R_10070001 RAL-850 2625 chr3R 10183225 10183293 chr3R 10183398 10183466 20 172 7.5 8.0 7.8 2.3 241 chr3R 10183225 intron CG12814 - chr3R 10183346 intron CG12814 - chr3R 10183466 intron CG12814 - chr3R_20_10180001 chr3R_10180001 RAL-850 2626 chr3R 10188188 10188266 chr3R 10188348 10188426 18 160 5.5 3.5 4.5 3.3 238 chr3R 10188188 intron CG12814 - chr3R 10188307 intron CG12814 - chr3R 10188426 intron CG12814 - chr3R_18_10185001 chr3R_10185001 RAL-850 2627 chr3R 10196912 10196920 chr3R 10202949 10202957 297 8 6037 21.5 6.5 14.0 0.5 6045 chr3R 10196912 exon Syn + chr3R 10199934 intron Syn + chr3R 10202957 intron Syn + chr3R_8_10195001 chr3R_10195001 RAL-850 2628 chr3R 10231739 10231814 chr3R 10237366 10237414 mdg3 27 5625 8.5 12.5 10.5 2.3 5675 chr3R 10231739 intron CG42795 + chr3R 10234576 intron CG42795 + chr3R 10237414 intron CG42795 + chr3R_27_10230001 chr3R_10230001 RAL-850 2629 chr3R 10255337 10255387 chr3R 10260827 10260877 I-element 22 5486 10.5 12.0 11.2 1.8 5540 chr3R 10255337 intergenic Sirt6 -,CG3999 + chr3R 10258107 intron Sirt6 - chr3R 10260877 exon Sirt6 - chr3R_22_10255001 chr3R_10255001 RAL-850 2630 chr3R 10332660 10332670 chr3R 10332789 10332799 4 129 19.0 7.5 13.2 0.3 139 chr3R 10332660 3` UTR CG12818 + chr3R 10332730 intergenic CG12818 +,sle + chr3R 10332799 intergenic CG12818 +,sle + chr3R_4_10330001 chr3R_10330001 RAL-850 2631 chr3R 10332677 10332724 chr3R 10332780 10332853 24 127 7.0 8.5 7.8 2.7 176 chr3R 10332677 3` UTR CG12818 + chr3R 10332765 intergenic CG12818 +,sle + chr3R 10332853 intergenic CG12818 +,sle + chr3R_24_10330001 chr3R_10330001 RAL-850 2632 chr3R 10531829 10531866 chr3R 10531960 10531997 20 130 16.5 0.0 8.2 2.2 168 chr3R 10531829 intron hth - chr3R 10531913 intron hth - chr3R 10531997 intron hth - chr3R_20_10530001 chr3R_10530001 RAL-850 2633 chr3R 10535287 10535338 chr3R 10535430 10535481 9 143 2.0 6.0 4.0 1.8 194 chr3R 10535287 intron hth - chr3R 10535384 intron hth - chr3R 10535481 intron hth - chr3R_9_10535001 chr3R_10535001 RAL-850 2634 chr3R 10553790 10553864 chr3R 10553929 10553993 38 134 12.0 12.5 12.2 2.9 203 chr3R 10553790 intron hth - chr3R 10553892 intron hth - chr3R 10553993 intron hth - chr3R_38_10550001 chr3R_10550001 RAL-850 2635 chr3R 10593425 10593461 chr3R 10593517 10593572 10 119 4.0 9.0 6.5 1.3 147 chr3R 10593425 intron hth - chr3R 10593498 intron hth - chr3R 10593572 exon hth - chr3R_10_10590001 chr3R_10590001 RAL-850 2636 chr3R 10609315 10609391 chr3R 10609453 10609529 15 138 5.5 3.5 4.5 2.7 214 chr3R 10609315 intron hth - chr3R 10609422 intron hth - chr3R 10609529 intron hth - chr3R_15_10605001 chr3R_10605001 RAL-850 2637 chr3R 10641558 10641593 chr3R 10641688 10641723 10 128 9.5 11.0 10.2 0.9 165 chr3R 10641558 5` UTR CR44018 + chr3R 10641640 5` UTR CR44018 + chr3R 10641723 5` UTR CR44018 + chr3R_10_10640001 chr3R_10640001 RAL-850 2638 chr3R 10641595 10641619 chr3R 10641679 10641747 9 125 5.5 9.5 7.5 1.1 152 chr3R 10641595 5` UTR CR44018 + chr3R 10641671 5` UTR CR44018 + chr3R 10641747 5` UTR CR44018 + chr3R_9_10640001 chr3R_10640001 RAL-850 2639 chr3R 10651771 10651774 chr3R 10651920 10651923 4 149 18.5 0.0 9.2 0.4 152 chr3R 10651771 intergenic not near genes chr3R 10651847 intergenic not near genes chr3R 10651923 intergenic not near genes chr3R_4_10650001 chr3R_10650001 RAL-850 2640 chr3R 10651776 10651835 chr3R 10651915 10651984 29 146 5.0 0.0 2.5 8.3 208 chr3R 10651776 intergenic not near genes chr3R 10651880 intergenic not near genes chr3R 10651984 intergenic not near genes chr3R_29_10650001 chr3R_10650001 RAL-850 2641 chr3R 10668568 10668609 chr3R 10668679 10668735 10 124 13.0 4.0 8.5 1.1 167 chr3R 10668568 intergenic not near genes chr3R 10668652 intergenic not near genes chr3R 10668735 intergenic not near genes chr3R_10_10665001 chr3R_10665001 RAL-850 2642 chr3R 10723720 10723756 chr3R 10723862 10723898 17 141 14.0 2.0 8.0 1.9 178 chr3R 10723720 intergenic not near genes chr3R 10723809 intergenic not near genes chr3R 10723898 intergenic not near genes chr3R_17_10720001 chr3R_10720001 RAL-850 2643 chr3R 10727599 10727667 chr3R 10727729 10727797 35 125 7.5 7.5 7.5 4.1 198 chr3R 10727599 intergenic not near genes chr3R 10727698 intergenic not near genes chr3R 10727797 intergenic not near genes chr3R_35_10725001 chr3R_10725001 RAL-850 2644 chr3R 10727668 10727678 chr3R 10727722 10727792 8 118 5.5 7.5 6.5 1.1 124 chr3R 10727668 intergenic not near genes chr3R 10727730 intergenic not near genes chr3R 10727792 intergenic not near genes chr3R_8_10725001 chr3R_10725001 RAL-850 2645 chr3R 10732274 10732344 chr3R 10733196 10733266 35 921 3.5 9.0 6.2 4.9 992 chr3R 10732274 intergenic not near genes chr3R 10732770 intergenic not near genes chr3R 10733266 intergenic not near genes chr3R_35_10730001 chr3R_10730001 RAL-850 2646 chr3R 10745380 10745386 chr3R 10745515 10745523 4 136 21.0 6.0 13.5 0.3 143 chr3R 10745380 intron TkR86C - chr3R 10745452 intron TkR86C - chr3R 10745523 intron TkR86C - chr3R_4_10745001 chr3R_10745001 RAL-850 2647 chr3R 10745392 10745446 chr3R 10745514 10745583 24 134 6.5 5.0 5.8 3.5 191 chr3R 10745392 intron TkR86C - chr3R 10745488 intron TkR86C - chr3R 10745583 intron TkR86C - chr3R_24_10745001 chr3R_10745001 RAL-850 2648 chr3R 10817174 10817211 chr3R 10817307 10817344 15 133 14.0 5.0 9.5 1.4 170 chr3R 10817174 3` UTR CG4089 + chr3R 10817259 3` UTR CG4089 + chr3R 10817344 3` UTR CG4089 + chr3R_15_10815001 chr3R_10815001 RAL-850 2649 chr3R 10817215 10817244 chr3R 10817302 10817377 15 129 6.5 5.0 5.8 2.2 162 chr3R 10817215 3` UTR CG4089 + chr3R 10817296 3` UTR CG4089 + chr3R 10817377 3` UTR CG4089 + chr3R_15_10815001 chr3R_10815001 RAL-850 2650 chr3R 10868546 10868575 chr3R 10868674 10868703 5 123 12.0 10.5 11.2 0.4 157 chr3R 10868546 5` UTR SelR - chr3R 10868624 5` UTR SelR - chr3R 10868703 intergenic Tsp86D +,SelR - chr3R_5_10865001 chr3R_10865001 RAL-850 2651 chr3R 10868587 10868623 chr3R 10868670 10868701 8 102 3.0 9.5 6.2 1.1 114 chr3R 10868587 5` UTR SelR - chr3R 10868644 intergenic SelR -,Tsp86D + chr3R 10868701 intergenic Tsp86D +,SelR - chr3R_8_10865001 chr3R_10865001 RAL-850 2652 chr3R 10900409 10900476 chr3R 10900535 10900603 17 126 8.0 7.0 7.5 2.0 194 chr3R 10900409 intergenic not near genes chr3R 10900506 intergenic not near genes chr3R 10900603 intergenic not near genes chr3R_17_10900001 chr3R_10900001 RAL-850 2653 chr3R 10904577 10904642 chr3R 10906751 10906801 32 2172 11.5 7.0 9.2 3.1 2224 chr3R 10904577 intergenic not near genes chr3R 10905689 intergenic not near genes chr3R 10906801 intergenic not near genes chr3R_32_10905001 chr3R_10905001 RAL-850 2654 chr3R 10906782 10906852 chr3R 10906908 10906978 27 118 7.5 10.5 9.0 2.7 196 chr3R 10906782 intergenic not near genes chr3R 10906880 intergenic not near genes chr3R 10906978 intergenic not near genes chr3R_27_10905001 chr3R_10905001 RAL-850 2655 chr3R 10919640 10919653 chr3R 10919768 10919780 6 128 19.5 3.5 11.5 0.5 140 chr3R 10919640 intergenic not near genes chr3R 10919710 intergenic not near genes chr3R 10919780 intergenic not near genes chr3R_6_10915001 chr3R_10915001 RAL-850 2656 chr3R 10919654 10919714 chr3R 10919764 10919842 28 126 7.5 4.5 6.0 4.0 188 chr3R 10919654 intergenic not near genes chr3R 10919748 intergenic not near genes chr3R 10919842 intergenic not near genes chr3R_28_10915001 chr3R_10915001 RAL-850 2657 chr3R 10919999 10920075 chr3R 10920127 10920178 23 127 8.5 9.5 9.0 2.3 179 chr3R 10919999 intergenic not near genes chr3R 10920088 intergenic not near genes chr3R 10920178 intergenic not near genes chr3R_23_10920001 chr3R_10920001 RAL-850 2658 chr3R 10957817 10957855 chr3R 10963256 10963294 Rt1c 18 5434 14.0 6.5 10.2 1.6 5477 chr3R 10957817 intergenic not near genes chr3R 10960556 intergenic not near genes chr3R 10963294 intergenic not near genes chr3R_18_10960001 chr3R_10960001 RAL-850 2659 chr3R 10957858 10957884 chr3R 10963254 10963323 Rt1c 19 5423 8.5 6.5 7.5 2.2 5465 chr3R 10957858 intergenic not near genes chr3R 10960590 intergenic not near genes chr3R 10963323 intergenic not near genes chr3R_19_10960001 chr3R_10960001 RAL-850 2660 chr3R 10979606 10979675 chr3R 10979738 10979807 21 131 8.0 6.0 7.0 2.6 201 chr3R 10979606 intron CG34114 + chr3R 10979706 intron CG34114 + chr3R 10979807 intron CG34114 + chr3R_21_10975001 chr3R_10975001 RAL-850 2661 chr3R 10994238 10994311 chr3R 10994367 10994432 32 127 6.5 8.0 7.2 3.9 194 chr3R 10994238 intron CG34114 + chr3R 10994335 intron CG34114 + chr3R 10994432 intron CG34114 + chr3R_32_10990001 chr3R_10990001 RAL-850 2662 chr3R 11024137 11024201 chr3R 11024283 11024347 25 144 10.5 9.0 9.8 2.3 210 chr3R 11024137 intron CG34114 + chr3R 11024242 intron CG34114 + chr3R 11024347 intron CG34114 + chr3R_25_11020001 chr3R_11020001 RAL-850 2663 chr3R 11052045 11052059 chr3R 11052174 11052188 4 129 9.5 3.5 6.5 0.5 143 chr3R 11052045 intergenic not near genes chr3R 11052116 intergenic not near genes chr3R 11052188 intergenic not near genes chr3R_4_11050001 chr3R_11050001 RAL-850 2664 chr3R 11056847 11056894 chr3R 11056975 11057022 14 128 13.5 1.5 7.5 1.6 175 chr3R 11056847 intergenic not near genes chr3R 11056934 intergenic not near genes chr3R 11057022 intergenic not near genes chr3R_14_11055001 chr3R_11055001 RAL-850 2665 chr3R 11085413 11085485 chr3R 11085540 11085612 12 127 4.5 4.0 4.2 2.3 199 chr3R 11085413 3` UTR CR44940 - chr3R 11085512 intergenic CR44940 - chr3R 11085612 intergenic CR44940 - chr3R_12_11085001 chr3R_11085001 RAL-850 2666 chr3R 11102281 11102297 chr3R 11102412 11102412 11 129 20.0 14.0 17.0 0.6 131 chr3R 11102281 intergenic not near genes chr3R 11102346 intergenic not near genes chr3R 11102412 intergenic not near genes chr3R_11_11100001 chr3R_11100001 RAL-850 2667 chr3R 11102301 11102321 chr3R 11102411 11102432 9 123 15.0 13.5 14.2 0.6 131 chr3R 11102301 intergenic not near genes chr3R 11102366 intergenic not near genes chr3R 11102432 intergenic not near genes chr3R_9_11100001 chr3R_11100001 RAL-850 2668 chr3R 11148870 11148879 chr3R 11148996 11149005 5 126 12.0 5.0 8.5 0.5 135 chr3R 11148870 intergenic not near genes chr3R 11148938 intergenic not near genes chr3R 11149005 intergenic not near genes chr3R_5_11145001 chr3R_11145001 RAL-850 2669 chr3R 11154992 11155069 chr3R 11155120 11155172 37 127 11.0 12.5 11.8 2.9 180 chr3R 11154992 intron Ugt86Dc + chr3R 11155082 intron Ugt86Dc + chr3R 11155172 intron Ugt86Dc + chr3R_37_11155001 chr3R_11155001 RAL-850 2670 chr3R 11174542 11174614 chr3R 11175306 11175378 26 763 45.0 48.5 46.8 0.5 836 chr3R 11174542 exon Ugt86Dj - chr3R 11174960 intron Ugt86Dj - chr3R 11175378 exon Ugt86Dj - chr3R_26_11170001 chr3R_11170001 RAL-850 2671 chr3R 11192239 11192244 chr3R 11192936 11192938 4 696 26.0 8.0 17.0 0.2 699 chr3R 11192239 intergenic not near genes chr3R 11192588 intergenic not near genes chr3R 11192938 intergenic not near genes chr3R_4_11190001 chr3R_11190001 RAL-850 2672 chr3R 11192245 11192306 chr3R 11192932 11193003 26 694 8.0 6.0 7.0 3.2 758 chr3R 11192245 intergenic not near genes chr3R 11192624 intergenic not near genes chr3R 11193003 intergenic not near genes chr3R_26_11190001 chr3R_11190001 RAL-850 2673 chr3R 11247196 11247226 chr3R 11247327 11247356 INE-1 9 130 13.0 7.0 10.0 0.8 160 chr3R 11247196 intergenic CG5214 +,CR43283 - chr3R 11247276 intergenic CR43283 -,CG5214 + chr3R 11247356 intergenic CR43283 -,CG5214 + chr3R_9_11245001 chr3R_11245001 RAL-850 2674 chr3R 11265890 11265903 chr3R 11266018 11266037 4 132 18.0 19.5 18.8 0.2 147 chr3R 11265890 intergenic not near genes chr3R 11265964 intergenic not near genes chr3R 11266037 intergenic not near genes chr3R_4_11265001 chr3R_11265001 RAL-850 2675 chr3R 11265905 11265919 chr3R 11266015 11266053 12 130 13.5 19.0 16.2 0.7 148 chr3R 11265905 intergenic not near genes chr3R 11265979 intergenic not near genes chr3R 11266053 intergenic not near genes chr3R_12_11265001 chr3R_11265001 RAL-850 2676 chr3R 11269400 11269471 chr3R 11269575 11269646 17 175 4.5 7.0 5.8 2.5 246 chr3R 11269400 intergenic CR31386 - chr3R 11269523 3` UTR CR31386 - chr3R 11269646 3` UTR CR31386 - chr3R_17_11265001 chr3R_11265001 RAL-850 2677 chr3R 11313185 11313251 chr3R 11313324 11313390 25 137 6.0 10.5 8.2 2.7 205 chr3R 11313185 intergenic not near genes chr3R 11313288 intergenic not near genes chr3R 11313390 intergenic not near genes chr3R_25_11310001 chr3R_11310001 RAL-850 2678 chr3R 11342494 11342568 chr3R 11342620 11342694 36 125 9.5 7.5 8.5 3.8 200 chr3R 11342494 intron pros + chr3R 11342594 intron pros + chr3R 11342694 intron pros + chr3R_36_11340001 chr3R_11340001 RAL-850 2679 chr3R 11342895 11342898 chr3R 11343024 11343025 5 136 6.0 17.5 11.8 0.4 130 chr3R 11342895 intron pros + chr3R 11342960 intron pros + chr3R 11343025 intron pros + chr3R_5_11340001 chr3R_11340001 RAL-850 2680 chr3R 11379196 11379227 chr3R 11388401 11388432 roo 15 9204 10.5 9.5 10.0 1.4 9236 chr3R 11379196 intron pros + chr3R 11383814 intron pros + chr3R 11388432 intron pros + chr3R_15_11380001 chr3R_11380001 RAL-850 2681 chr3R 11452028 11452053 chr3R 11452165 11452190 15 137 20.5 12.0 16.2 0.9 162 chr3R 11452028 intron CG17230 + chr3R 11452109 intron CG17230 + chr3R 11452190 intron CG17230 + chr3R_15_11450001 chr3R_11450001 RAL-850 2682 chr3R 11452054 11452105 chr3R 11452164 11452241 25 134 8.0 12.0 10.0 2.3 187 chr3R 11452054 intron CG17230 + chr3R 11452148 intron CG17230 + chr3R 11452241 intron CG17230 + chr3R_25_11450001 chr3R_11450001 RAL-850 2683 chr3R 11455538 11455559 chr3R 11455714 11455735 10 174 20.5 9.5 15.0 0.6 197 chr3R 11455538 intron,intron CG17230 +,PGRP-LB - chr3R 11455636 intron,intron CG17230 +,PGRP-LB - chr3R 11455735 intron,intron CG17230 +,PGRP-LB - chr3R_10_11455001 chr3R_11455001 RAL-850 2684 chr3R 11455560 11455600 chr3R 11455711 11455776 26 174 7.5 9.5 8.5 2.7 216 chr3R 11455560 intron,intron CG17230 +,PGRP-LB - chr3R 11455668 intron,intron CG17230 +,PGRP-LB - chr3R 11455776 intron,intron CG17230 +,PGRP-LB - chr3R_26_11455001 chr3R_11455001 RAL-850 2685 chr3R 11483414 11483420 chr3R 11483549 11483554 5 135 21.0 16.5 18.8 0.3 140 chr3R 11483414 intergenic not near genes chr3R 11483484 intergenic not near genes chr3R 11483554 intergenic not near genes chr3R_5_11480001 chr3R_11480001 RAL-850 2686 chr3R 11483423 11483436 chr3R 11483538 11483571 5 124 16.0 12.5 14.2 0.3 148 chr3R 11483423 intergenic not near genes chr3R 11483497 intergenic not near genes chr3R 11483571 intergenic not near genes chr3R_5_11480001 chr3R_11480001 RAL-850 2687 chr3R 11483438 11483475 chr3R 11483536 11483597 18 123 5.0 11.0 8.0 2.0 159 chr3R 11483438 intergenic not near genes chr3R 11483518 intergenic not near genes chr3R 11483597 intergenic not near genes chr3R_18_11480001 chr3R_11480001 RAL-850 2688 chr3R 11664743 11664820 chr3R 11664885 11664962 38 140 0.0 10.5 5.2 6.1 219 chr3R 11664743 intron CG42327 + chr3R 11664852 intron CG42327 + chr3R 11664962 intron CG42327 + chr3R_38_11660001 chr3R_11660001 RAL-850 2689 chr3R 11694682 11694743 chr3R 11694825 11694886 18 143 9.0 5.5 7.2 2.2 204 chr3R 11694682 intergenic Fer3 - chr3R 11694784 intergenic Fer3 - chr3R 11694886 intergenic not near genes chr3R_18_11690001 chr3R_11690001 RAL-850 2690 chr3R 11708587 11708663 chr3R 11708845 11708921 32 258 7.5 0.0 3.8 6.7 334 chr3R 11708587 intergenic not near genes chr3R 11708754 intergenic not near genes chr3R 11708921 intergenic not near genes chr3R_32_11705001 chr3R_11705001 RAL-850 2691 chr3R 11713449 11713523 chr3R 11713579 11713653 30 126 10.0 10.5 10.2 2.7 204 chr3R 11713449 intergenic not near genes chr3R 11713551 intergenic not near genes chr3R 11713653 intergenic not near genes chr3R_30_11710001 chr3R_11710001 RAL-850 2692 chr3R 11728123 11728207 chr3R 11728258 11728331 14 129 4.5 6.5 5.5 2.2 208 chr3R 11728123 intron CG12594 + chr3R 11728227 intron CG12594 + chr3R 11728331 intron CG12594 + chr3R_14_11725001 chr3R_11725001 RAL-850 2693 chr3R 11811050 11811053 chr3R 11811196 11811199 4 145 26.0 12.5 19.2 0.2 149 chr3R 11811050 5` UTR ClC-a - chr3R 11811124 5` UTR ClC-a - chr3R 11811199 intron ClC-a - chr3R_4_11810001 chr3R_11810001 RAL-850 2694 chr3R 11811060 11811125 chr3R 11811191 11811216 42 141 6.0 10.5 8.2 4.6 156 chr3R 11811060 5` UTR ClC-a - chr3R 11811138 intron ClC-a - chr3R 11811216 intron ClC-a - chr3R_42_11810001 chr3R_11810001 RAL-850 2695 chr3R 11830302 11830359 chr3R 11830436 11830493 24 134 6.5 7.5 7.0 3.0 191 chr3R 11830302 intron CG6959 - chr3R 11830398 intron CG6959 - chr3R 11830493 intron CG6959 - chr3R_24_11830001 chr3R_11830001 RAL-850 2696 chr3R 11830927 11830945 chr3R 11831121 11831139 6 193 10.0 4.0 7.0 0.8 212 chr3R 11830927 intron CG6959 - chr3R 11831033 intron CG6959 - chr3R 11831139 intron CG6959 - chr3R_6_11830001 chr3R_11830001 RAL-850 2697 chr3R 11841020 11841043 chr3R 11846260 11846284 BS 7 5241 21.5 7.5 14.5 0.5 5264 chr3R 11841020 intron CG6959 - chr3R 11843652 intron CG6959 - chr3R 11846284 intron CG6959 - chr3R_7_11840001 chr3R_11840001 RAL-850 2698 chr3R 11841044 11841087 chr3R 11846253 11846303 BS 19 5227 11.0 6.0 8.5 2.0 5259 chr3R 11841044 intron CG6959 - chr3R 11843674 intron CG6959 - chr3R 11846303 intron CG6959 - chr3R_19_11840001 chr3R_11840001 RAL-850 2699 chr3R 11919262 11919331 chr3R 11919400 11919454 30 127 6.5 10.5 8.5 3.2 192 chr3R 11919262 intron Cad87A - chr3R 11919358 intron Cad87A - chr3R 11919454 intron Cad87A - chr3R_30_11915001 chr3R_11915001 RAL-850 2700 chr3R 11945334 11945402 chr3R 11945482 11945550 21 148 12.0 1.5 6.8 2.7 216 chr3R 11945334 intron Cad87A - chr3R 11945442 intron Cad87A - chr3R 11945550 intron Cad87A - chr3R_21_11945001 chr3R_11945001 RAL-850 2701 chr3R 11957812 11957879 chr3R 11958145 11958212 S-element 12 332 7.5 2.5 5.0 2.0 400 chr3R 11957812 intergenic not near genes chr3R 11958012 intergenic not near genes chr3R 11958212 intergenic not near genes chr3R_12_11955001 chr3R_11955001 RAL-850 2702 chr3R 11994954 11994959 chr3R 11995083 11995087 4 129 11.0 6.5 8.8 0.4 133 chr3R 11994954 intron Tk - chr3R 11995020 exon Tk - chr3R 11995087 exon Tk - chr3R_4_11995001 chr3R_11995001 RAL-850 2703 chr3R 11994968 11994989 chr3R 11995077 11995112 7 118 11.0 5.0 8.0 0.8 144 chr3R 11994968 exon Tk - chr3R 11995040 exon Tk - chr3R 11995112 exon Tk - chr3R_7_11995001 chr3R_11995001 RAL-850 2704 chr3R 11994995 11995024 chr3R 11995070 11995128 18 117 6.0 5.0 5.5 2.8 133 chr3R 11994995 exon Tk - chr3R 11995062 exon Tk - chr3R 11995128 exon Tk - chr3R_18_11995001 chr3R_11995001 RAL-850 2705 chr3R 12016998 12017022 chr3R 12017125 12017149 17 124 7.5 22.5 15.0 1.1 151 chr3R 12016998 5` UTR CG3313 - chr3R 12017074 intergenic CG3313 -,Spt3 + chr3R 12017149 intergenic Spt3 +,CG3313 - chr3R_17_12015001 chr3R_12015001 RAL-850 2706 chr3R 12022839 12022908 chr3R 12025066 12025135 pogo 31 2225 8.0 13.0 10.5 2.7 2296 chr3R 12022839 intergenic not near genes chr3R 12023987 intergenic not near genes chr3R 12025135 intergenic not near genes chr3R_31_12020001 chr3R_12020001 RAL-850 2707 chr3R 12037269 12037337 chr3R 12037576 12037646 10 308 0.0 7.5 3.8 2.1 377 chr3R 12037269 intergenic not near genes chr3R 12037458 intergenic not near genes chr3R 12037646 intergenic not near genes chr3R_10_12035001 chr3R_12035001 RAL-850 2708 chr3R 12081983 12082023 chr3R 12082078 12082098 4 95 6.5 3.0 4.8 0.7 115 chr3R 12081983 intron CG14741 - chr3R 12082040 intron CG14741 - chr3R 12082098 intron CG14741 - chr3R_4_12080001 chr3R_12080001 RAL-850 2709 chr3R 12085341 12085420 chr3R 12085507 12085564 17 146 8.5 1.5 5.0 2.8 223 chr3R 12085341 intron CG14741 - chr3R 12085452 intron CG14741 - chr3R 12085564 intron CG14741 - chr3R_17_12085001 chr3R_12085001 RAL-850 2710 chr3R 12111832 12111901 chr3R 12111967 12111991 14 130 0.0 4.5 2.2 4.4 159 chr3R 12111832 intergenic dpr17 + chr3R 12111912 intergenic dpr17 + chr3R 12111991 intergenic not near genes chr3R_14_12110001 chr3R_12110001 RAL-850 2711 chr3R 12154055 12154096 chr3R 12154444 12154487 12 388 36.0 41.5 38.8 0.3 432 chr3R 12154055 intron dpr15 - chr3R 12154271 intron dpr15 - chr3R 12154487 intron dpr15 - chr3R_12_12150001 chr3R_12150001 RAL-850 2712 chr3R 12169188 12169220 chr3R 12169316 12169348 11 128 13.5 10.0 11.8 0.9 160 chr3R 12169188 intergenic not near genes chr3R 12169268 intergenic not near genes chr3R 12169348 intergenic not near genes chr3R_11_12165001 chr3R_12165001 RAL-850 2713 chr3R 12175184 12175231 chr3R 12175314 12175362 8 131 9.5 5.0 7.2 1.0 178 chr3R 12175184 intergenic not near genes chr3R 12175273 intergenic not near genes chr3R 12175362 intergenic not near genes chr3R_8_12175001 chr3R_12175001 RAL-850 2714 chr3R 12175234 12175257 chr3R 12175364 12175388 6 131 6.0 12.0 9.0 0.6 154 chr3R 12175234 intergenic not near genes chr3R 12175311 intergenic not near genes chr3R 12175388 intergenic not near genes chr3R_6_12175001 chr3R_12175001 RAL-850 2715 chr3R 12183133 12183200 chr3R 12183264 12183336 31 134 7.0 7.0 7.0 3.9 203 chr3R 12183133 intergenic not near genes chr3R 12183234 intergenic not near genes chr3R 12183336 intergenic not near genes chr3R_31_12180001 chr3R_12180001 RAL-850 2716 chr3R 12267813 12267883 chr3R 12267943 12268013 23 130 8.0 9.5 8.8 2.3 200 chr3R 12267813 intron svp + chr3R 12267913 intron svp + chr3R 12268013 intron svp + chr3R_23_12265001 chr3R_12265001 RAL-850 2717 chr3R 12344083 12344155 chr3R 12344210 12344282 26 124 3.0 5.0 4.0 5.2 199 chr3R 12344083 intergenic not near genes chr3R 12344182 intergenic not near genes chr3R 12344282 intergenic not near genes chr3R_26_12340001 chr3R_12340001 RAL-850 2718 chr3R 12348611 12348625 chr3R 12348766 12348780 6 153 19.0 8.0 13.5 0.4 169 chr3R 12348611 intergenic CG10038 - chr3R 12348696 intergenic CG10038 - chr3R 12348780 intergenic CG10038 - chr3R_6_12345001 chr3R_12345001 RAL-850 2719 chr3R 12348631 12348677 chr3R 12348760 12348832 30 150 9.0 6.0 7.5 3.5 201 chr3R 12348631 intergenic CG10038 - chr3R 12348732 intergenic CG10038 - chr3R 12348832 intergenic CG10038 - chr3R_30_12345001 chr3R_12345001 RAL-850 2720 chr3R 12364721 12364783 chr3R 12364862 12364924 27 141 8.5 12.5 10.5 2.3 203 chr3R 12364721 intergenic Tim17a1 -,GstD10 - chr3R 12364822 3` UTR GstD10 - chr3R 12364924 exon GstD10 - chr3R_27_12360001 chr3R_12360001 RAL-850 2721 chr3R 12541149 12541195 chr3R 12543309 12543381 30 2175 12.0 8.5 10.2 2.7 2232 chr3R 12541149 intron Octbeta3R - chr3R 12542265 intron Octbeta3R - chr3R 12543381 intron Octbeta3R - chr3R_30_12540001 chr3R_12540001 RAL-850 2722 chr3R 12555405 12555433 chr3R 12555534 12555541 10 124 16.0 8.5 12.2 0.8 136 chr3R 12555405 intron Octbeta2R - chr3R 12555473 intron Octbeta2R - chr3R 12555541 intron Octbeta2R - chr3R_10_12555001 chr3R_12555001 RAL-850 2723 chr3R 12555445 12555465 chr3R 12555522 12555554 5 109 10.5 7.5 9.0 0.5 109 chr3R 12555445 intron Octbeta2R - chr3R 12555500 intron Octbeta2R - chr3R 12555554 intron Octbeta2R - chr3R_5_12555001 chr3R_12555001 RAL-850 2724 chr3R 12598970 12599031 chr3R 12599144 12599221 29 177 11.0 10.0 10.5 2.5 251 chr3R 12598970 intergenic not near genes chr3R 12599096 intergenic not near genes chr3R 12599221 intergenic not near genes chr3R_29_12595001 chr3R_12595001 RAL-850 2725 chr3R 12725926 12725939 chr3R 12726056 12726067 5 132 15.5 7.0 11.2 0.4 141 chr3R 12725926 intergenic not near genes chr3R 12725996 intergenic not near genes chr3R 12726067 intergenic not near genes chr3R_5_12725001 chr3R_12725001 RAL-850 2726 chr3R 12725941 12725970 chr3R 12726054 12726124 15 144 7.0 6.5 6.8 1.9 183 chr3R 12725941 intergenic not near genes chr3R 12726032 intergenic not near genes chr3R 12726124 intergenic not near genes chr3R_15_12725001 chr3R_12725001 RAL-850 2727 chr3R 12733430 12733442 chr3R 12733557 12733569 7 127 26.0 13.0 19.5 0.3 139 chr3R 12733430 intergenic not near genes chr3R 12733500 intergenic not near genes chr3R 12733569 intergenic not near genes chr3R_7_12730001 chr3R_12730001 RAL-850 2728 chr3R 12733447 12733505 chr3R 12733553 12733624 34 122 11.0 13.0 12.0 2.6 177 chr3R 12733447 intergenic not near genes chr3R 12733536 intergenic not near genes chr3R 12733624 intergenic not near genes chr3R_34_12730001 chr3R_12730001 RAL-850 2729 chr3R 12733813 12733825 chr3R 12733943 12733955 4 128 23.0 9.0 16.0 0.2 142 chr3R 12733813 intergenic not near genes chr3R 12733884 intergenic not near genes chr3R 12733955 intergenic not near genes chr3R_4_12730001 chr3R_12730001 RAL-850 2730 chr3R 12733828 12733881 chr3R 12733937 12734006 20 126 8.5 8.0 8.2 2.2 178 chr3R 12733828 intergenic not near genes chr3R 12733917 intergenic not near genes chr3R 12734006 intergenic not near genes chr3R_20_12730001 chr3R_12730001 RAL-850 2731 chr3R 12748771 12748831 chr3R 12749222 12749227 9 433 6.5 6.0 6.2 1.2 456 chr3R 12748771 intron beat-Vc - chr3R 12748999 intron beat-Vc - chr3R 12749227 intron beat-Vc - chr3R_9_12745001 chr3R_12745001 RAL-850 2732 chr3R 12763060 12763151 chr3R 12763198 12763278 22 132 1.0 3.5 2.2 6.9 218 chr3R 12763060 intron beat-Vc - chr3R 12763169 intron beat-Vc - chr3R 12763278 intron beat-Vc - chr3R_22_12760001 chr3R_12760001 RAL-850 2733 chr3R 12771361 12771384 chr3R 12771541 12771564 5 179 15.5 4.0 9.8 0.5 203 chr3R 12771361 intron beat-Vc - chr3R 12771462 intron beat-Vc - chr3R 12771564 intron beat-Vc - chr3R_5_12770001 chr3R_12770001 RAL-850 2734 chr3R 12771388 12771426 chr3R 12771536 12771593 15 169 9.0 3.5 6.2 2.1 205 chr3R 12771388 intron beat-Vc - chr3R 12771490 intron beat-Vc - chr3R 12771593 intron beat-Vc - chr3R_15_12770001 chr3R_12770001 RAL-850 2735 chr3R 12787895 12787956 chr3R 12788028 12788089 15 133 7.0 0.0 3.5 3.3 194 chr3R 12787895 intergenic not near genes chr3R 12787992 intergenic not near genes chr3R 12788089 intergenic not near genes chr3R_15_12785001 chr3R_12785001 RAL-850 2736 chr3R 12805810 12805882 chr3R 12805946 12806018 26 135 6.5 11.0 8.8 2.7 208 chr3R 12805810 intergenic not near genes chr3R 12805914 intergenic not near genes chr3R 12806018 intergenic not near genes chr3R_26_12805001 chr3R_12805001 RAL-850 2737 chr3R 12818977 12818991 chr3R 12819110 12819124 6 133 17.5 3.5 10.5 0.5 147 chr3R 12818977 intergenic not near genes chr3R 12819050 intergenic not near genes chr3R 12819124 intergenic not near genes chr3R_6_12815001 chr3R_12815001 RAL-850 2738 chr3R 12819007 12819042 chr3R 12819109 12819176 7 127 5.0 3.5 4.2 1.3 169 chr3R 12819007 intergenic not near genes chr3R 12819092 intergenic not near genes chr3R 12819176 intergenic not near genes chr3R_7_12815001 chr3R_12815001 RAL-850 2739 chr3R 12886893 12886949 chr3R 12887011 12887084 23 132 7.5 7.0 7.2 2.8 191 chr3R 12886893 intergenic not near genes chr3R 12886988 intergenic not near genes chr3R 12887084 intergenic not near genes chr3R_23_12885001 chr3R_12885001 RAL-850 2740 chr3R 12920129 12920179 chr3R 12925362 12925411 copia 21 5248 5.5 7.5 6.5 2.8 5282 chr3R 12920129 intron beat-Vb + chr3R 12922770 intron beat-Vb + chr3R 12925411 intron beat-Vb + chr3R_21_12920001 chr3R_12920001 RAL-850 2741 chr3R 12926677 12926751 chr3R 12926838 12926912 38 161 6.0 9.0 7.5 4.5 235 chr3R 12926677 intron beat-Vb + chr3R 12926794 intron beat-Vb + chr3R 12926912 intron beat-Vb + chr3R_38_12925001 chr3R_12925001 RAL-850 2742 chr3R 12931170 12931246 chr3R 12931297 12931373 33 126 13.5 12.0 12.8 2.4 203 chr3R 12931170 intron,3` UTR beat-Vb +,CR44236 - chr3R 12931272 intron,3` UTR beat-Vb +,CR44236 - chr3R 12931373 intron beat-Vb + chr3R_33_12930001 chr3R_12930001 RAL-850 2743 chr3R 12943929 12943996 chr3R 12944066 12944127 27 136 9.0 10.5 9.8 2.5 198 chr3R 12943929 intergenic not near genes chr3R 12944028 intergenic not near genes chr3R 12944127 intergenic not near genes chr3R_27_12940001 chr3R_12940001 RAL-850 2744 chr3R 12952237 12952313 chr3R 12952412 12952456 36 169 4.5 8.5 6.5 4.8 219 chr3R 12952237 intron grsm - chr3R 12952346 intron grsm - chr3R 12952456 intron grsm - chr3R_36_12950001 chr3R_12950001 RAL-850 2745 chr3R 13059912 13059922 chr3R 13060157 13060167 6 245 14.5 0.0 7.2 0.7 255 chr3R 13059912 intron sim + chr3R 13060040 intron sim + chr3R 13060167 intron sim + chr3R_6_13060001 chr3R_13060001 RAL-850 2746 chr3R 13066961 13067134 chr3R 13067098 13067260 25 132 1.5 0.0 0.8 13.9 299 chr3R 13066961 intron sim + chr3R 13067110 intron sim + chr3R 13067260 intron sim + chr3R_25_13065001 chr3R_13065001 RAL-850 2747 chr3R 13071008 13071080 chr3R 13071150 13071222 23 124 8.0 5.0 6.5 3.1 214 chr3R 13071008 intron sim + chr3R 13071115 intron sim + chr3R 13071222 intron sim + chr3R_23_13070001 chr3R_13070001 RAL-850 2748 chr3R 13075309 13075366 chr3R 13075440 13075497 16 131 9.5 5.5 7.5 1.9 188 chr3R 13075309 intron sim + chr3R 13075403 intron sim + chr3R 13075497 intron sim + chr3R_16_13075001 chr3R_13075001 RAL-850 2749 chr3R 13120721 13120800 chr3R 13120848 13120925 35 122 9.5 14.5 12.0 2.7 204 chr3R 13120721 intron timeout + chr3R 13120823 intron timeout + chr3R 13120925 intron timeout + chr3R_35_13120001 chr3R_13120001 RAL-850 2750 chr3R 13135789 13135852 chr3R 13138008 13138077 pogo 27 2224 8.5 4.0 6.2 3.8 2288 chr3R 13135789 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136933 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138077 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_27_13135001 chr3R_13135001 RAL-850 2751 chr3R 13142989 13143059 chr3R 13148611 13148630 mdg3 39 5619 8.0 8.5 8.2 4.2 5641 chr3R 13142989 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145810 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148630 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_39_13145001 chr3R_13145001 RAL-850 2752 chr3R 13149727 13149774 chr3R 13150034 13150066 8 310 13.0 15.5 14.2 0.5 339 chr3R 13149727 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13149896 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13150066 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_8_13145001 chr3R_13145001 RAL-850 2753 chr3R 13195915 13195976 chr3R 13196049 13196121 36 141 9.5 8.0 8.8 3.7 206 chr3R 13195915 intergenic not near genes chr3R 13196018 intergenic not near genes chr3R 13196121 intergenic not near genes chr3R_36_13195001 chr3R_13195001 RAL-850 2754 chr3R 13248604 13248677 chr3R 13248753 13248826 60 149 11.5 0.0 5.8 8.8 222 chr3R 13248604 intron Ace - chr3R 13248715 intron Ace - chr3R 13248826 intron Ace - chr3R_60_13245001 chr3R_13245001 RAL-850 2755 chr3R 13249562 13249593 chr3R 13249726 13249757 18 164 14.0 2.5 8.2 2.0 195 chr3R 13249562 intron Ace - chr3R 13249660 intron Ace - chr3R 13249757 intron Ace - chr3R_18_13245001 chr3R_13245001 RAL-850 2756 chr3R 13260676 13260750 chr3R 13260857 13260931 50 180 16.5 16.0 16.2 2.9 255 chr3R 13260676 intron CG11686 + chr3R 13260804 intron CG11686 + chr3R 13260931 intron CG11686 + chr3R_50_13260001 chr3R_13260001 RAL-850 2757 chr3R 13272013 13272077 chr3R 13272148 13272211 13 135 7.5 3.0 5.2 2.1 198 chr3R 13272013 intergenic CG8449 - chr3R 13272112 intergenic CG8449 - chr3R 13272211 intergenic CG8449 - chr3R_13_13270001 chr3R_13270001 RAL-850 2758 chr3R 13274168 13274228 chr3R 13274297 13274357 23 126 10.0 10.0 10.0 2.1 189 chr3R 13274168 intergenic not near genes chr3R 13274262 intergenic not near genes chr3R 13274357 intergenic not near genes chr3R_23_13270001 chr3R_13270001 RAL-850 2759 chr3R 13305618 13305677 chr3R 13305755 13305814 22 137 6.5 9.0 7.8 2.5 196 chr3R 13305618 intron CG32473 + chr3R 13305716 intron CG32473 + chr3R 13305814 intron CG32473 + chr3R_22_13305001 chr3R_13305001 RAL-850 2760 chr3R 13306073 13306150 chr3R 13306511 13306575 17 435 9.5 8.0 8.8 1.7 502 chr3R 13306073 intron CG32473 + chr3R 13306324 intron CG32473 + chr3R 13306575 intron CG32473 + chr3R_17_13305001 chr3R_13305001 RAL-850 2761 chr3R 13314069 13314127 chr3R 13318907 13318964 Doc 8 4838 6.0 1.0 3.5 1.8 4895 chr3R 13314069 intergenic not near genes chr3R 13316516 intergenic not near genes chr3R 13318964 intergenic CG45080 - chr3R_8_13315001 chr3R_13315001 RAL-850 2762 chr3R 13326885 13326961 chr3R 13327030 13327106 24 143 6.0 6.0 6.0 3.4 221 chr3R 13326885 intergenic not near genes chr3R 13326996 intergenic not near genes chr3R 13327106 intergenic not near genes chr3R_24_13325001 chr3R_13325001 RAL-850 2763 chr3R 13356041 13356113 chr3R 13356176 13356248 27 135 6.0 9.5 7.8 3.1 207 chr3R 13356041 intergenic not near genes chr3R 13356144 intergenic not near genes chr3R 13356248 intergenic not near genes chr3R_27_13355001 chr3R_13355001 RAL-850 2764 chr3R 13391591 13391656 chr3R 13391719 13391782 45 126 11.5 10.5 11.0 3.8 191 chr3R 13391591 intron CCHa2 - chr3R 13391686 intron CCHa2 - chr3R 13391782 intron CCHa2 - chr3R_45_13390001 chr3R_13390001 RAL-850 2765 chr3R 13496582 13496663 chr3R 13496711 13496792 24 129 7.5 6.5 7.0 3.0 210 chr3R 13496582 intergenic not near genes chr3R 13496687 intergenic not near genes chr3R 13496792 intergenic not near genes chr3R_24_13495001 chr3R_13495001 RAL-850 2766 chr3R 13517181 13517259 chr3R 13520048 13520125 jockey 14 2866 7.5 0.0 3.8 2.9 2944 chr3R 13517181 intergenic not near genes chr3R 13518653 intergenic not near genes chr3R 13520125 intergenic not near genes chr3R_14_13515001 chr3R_13515001 RAL-850 2767 chr3R 13526642 13526690 chr3R 13526771 13526819 12 129 10.5 5.0 7.8 1.4 177 chr3R 13526642 intergenic not near genes chr3R 13526730 intergenic not near genes chr3R 13526819 intergenic not near genes chr3R_12_13525001 chr3R_13525001 RAL-850 2768 chr3R 13554105 13554169 chr3R 13554234 13554285 26 122 13.0 15.0 14.0 1.7 180 chr3R 13554105 intergenic not near genes chr3R 13554195 intergenic not near genes chr3R 13554285 intergenic not near genes chr3R_26_13550001 chr3R_13550001 RAL-850 2769 chr3R 13603011 13603306 chr3R 13603152 13603448 25 141 12.0 6.5 9.2 2.5 437 chr3R 13603011 intergenic not near genes chr3R 13603230 intergenic not near genes chr3R 13603448 intergenic not near genes chr3R_25_13600001 chr3R_13600001 RAL-850 2770 chr3R 13603316 13603367 chr3R 13603448 13603509 12 141 5.5 8.0 6.8 1.5 193 chr3R 13603316 intergenic not near genes chr3R 13603412 intergenic not near genes chr3R 13603509 intergenic not near genes chr3R_12_13600001 chr3R_13600001 RAL-850 2771 chr3R 13604016 13604081 chr3R 13604298 13604366 34 285 7.0 7.0 7.0 4.2 350 chr3R 13604016 intergenic not near genes chr3R 13604191 intergenic not near genes chr3R 13604366 intergenic not near genes chr3R_34_13600001 chr3R_13600001 RAL-850 2772 chr3R 13606671 13606733 chr3R 13606863 13606918 11 195 7.5 5.0 6.2 1.5 247 chr3R 13606671 intergenic CG9759 - chr3R 13606794 intergenic CG9759 - chr3R 13606918 intergenic CG9759 - chr3R_11_13605001 chr3R_13605001 RAL-850 2773 chr3R 13659828 13659839 chr3R 13659966 13659977 4 138 0.0 0.0 0.0 4.0 149 chr3R 13659828 intron Hrb87F - chr3R 13659902 intron Hrb87F - chr3R 13659977 intron Hrb87F - chr3R_4_13655001 chr3R_13655001 RAL-850 2774 chr3R 13672899 13672915 chr3R 13673027 13673043 7 128 20.0 11.0 15.5 0.4 144 chr3R 13672899 intron Task6 - chr3R 13672971 intron Task6 - chr3R 13673043 intron Task6 - chr3R_7_13670001 chr3R_13670001 RAL-850 2775 chr3R 13672919 13672965 chr3R 13673017 13673093 24 125 11.0 11.0 11.0 2.0 174 chr3R 13672919 intron Task6 - chr3R 13673006 intron Task6 - chr3R 13673093 intron Task6 - chr3R_24_13670001 chr3R_13670001 RAL-850 2776 chr3R 13693028 13693028 chr3R 21907534 21907536 6 8214507 43.0 40.0 41.5 0.1 8214508 chr3R 13693028 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_6_17800001 chr3R_17800001 RAL-850 2777 chr3R 13714492 13714550 chr3R 13714681 13714739 19 189 2.5 11.0 6.8 2.4 247 chr3R 13714492 intergenic CR34044 - chr3R 13714616 intergenic CR34044 - chr3R 13714739 intergenic CG34383 + chr3R_19_13710001 chr3R_13710001 RAL-850 2778 chr3R 13719437 13719488 chr3R 13719990 13720041 21 552 7.0 8.0 7.5 2.5 604 chr3R 13719437 intron CG34383 + chr3R 13719739 intron CG34383 + chr3R 13720041 intron CG34383 + chr3R_21_13715001 chr3R_13715001 RAL-850 2779 chr3R 13828797 13828874 chr3R 13828933 13829010 21 136 6.0 4.0 5.0 3.5 213 chr3R 13828797 intergenic CR43300 + chr3R 13828904 intergenic CR43300 + chr3R 13829010 intergenic not near genes chr3R_21_13825001 chr3R_13825001 RAL-850 2780 chr3R 13830714 13830785 chr3R 13830920 13830999 23 212 3.5 6.0 4.8 4.0 285 chr3R 13830714 intergenic not near genes chr3R 13830856 intergenic not near genes chr3R 13830999 intergenic not near genes chr3R_23_13830001 chr3R_13830001 RAL-850 2781 chr3R 13841243 13841289 chr3R 13841337 13841405 15 107 0.0 7.5 3.8 3.1 162 chr3R 13841243 intergenic not near genes chr3R 13841324 intergenic not near genes chr3R 13841405 intergenic not near genes chr3R_15_13840001 chr3R_13840001 RAL-850 2782 chr3R 13850260 13850342 chr3R 13850405 13850480 23 142 0.0 4.5 2.2 7.2 220 chr3R 13850260 intergenic not near genes chr3R 13850370 intergenic not near genes chr3R 13850480 intergenic not near genes chr3R_23_13850001 chr3R_13850001 RAL-850 2783 chr3R 13863634 13863701 chr3R 13863771 13863839 30 136 8.5 9.0 8.8 3.1 205 chr3R 13863634 intergenic not near genes chr3R 13863736 intergenic not near genes chr3R 13863839 intergenic not near genes chr3R_30_13860001 chr3R_13860001 RAL-850 2784 chr3R 13909869 13909881 chr3R 13909998 13910009 9 129 9.5 11.5 10.5 0.8 140 chr3R 13909869 intergenic not near genes chr3R 13909939 intergenic not near genes chr3R 13910009 intergenic not near genes chr3R_9_13905001 chr3R_13905001 RAL-850 2785 chr3R 13909882 13909908 chr3R 13909997 13910013 10 122 5.5 11.5 8.5 1.1 131 chr3R 13909882 intergenic not near genes chr3R 13909948 intergenic not near genes chr3R 13910013 intergenic not near genes chr3R_10_13905001 chr3R_13905001 RAL-850 2786 chr3R 14014228 14014245 chr3R 14014410 14014427 4 182 12.5 0.0 6.2 0.6 199 chr3R 14014228 intron rdx - chr3R 14014328 intron rdx - chr3R 14014427 intron rdx - chr3R_4_14010001 chr3R_14010001 RAL-850 2787 chr3R 14021606 14021677 chr3R 14023473 14023544 S-element 28 1866 6.5 8.5 7.5 3.3 1938 chr3R 14021606 intron rdx - chr3R 14022575 intron rdx - chr3R 14023544 intron rdx - chr3R_28_14020001 chr3R_14020001 RAL-850 2788 chr3R 14037541 14037545 chr3R 14037672 14037676 4 131 19.5 8.0 13.8 0.3 135 chr3R 14037541 intergenic not near genes chr3R 14037608 intergenic not near genes chr3R 14037676 intergenic not near genes chr3R_4_14035001 chr3R_14035001 RAL-850 2789 chr3R 14037552 14037587 chr3R 14037666 14037722 13 131 10.0 6.5 8.2 1.4 170 chr3R 14037552 intergenic not near genes chr3R 14037637 intergenic not near genes chr3R 14037722 intergenic not near genes chr3R_13_14035001 chr3R_14035001 RAL-850 2790 chr3R 14058078 14058146 chr3R 14058248 14058316 26 170 5.5 2.5 4.0 5.2 238 chr3R 14058078 5` UTR foxo + chr3R 14058197 intron foxo + chr3R 14058316 intron foxo + chr3R_26_14055001 chr3R_14055001 RAL-850 2791 chr3R 14067094 14067153 chr3R 14067223 14067282 28 129 8.5 13.5 11.0 2.3 188 chr3R 14067094 exon foxo + chr3R 14067188 intron foxo + chr3R 14067282 intron foxo + chr3R_28_14065001 chr3R_14065001 RAL-850 2792 chr3R 14079776 14079779 chr3R 14079908 14079911 4 132 0.5 0.5 0.5 2.7 135 chr3R 14079776 intron foxo + chr3R 14079844 intron foxo + chr3R 14079911 intron foxo + chr3R_4_14075001 chr3R_14075001 RAL-850 2793 chr3R 14079786 14079856 chr3R 14079918 14079988 12 132 0.5 0.5 0.5 8.0 202 chr3R 14079786 intron foxo + chr3R 14079887 intron foxo + chr3R 14079988 intron foxo + chr3R_12_14075001 chr3R_14075001 RAL-850 2794 chr3R 14083365 14083398 chr3R 14083516 14083538 13 150 16.0 0.0 8.0 1.4 173 chr3R 14083365 intron foxo + chr3R 14083452 intron foxo + chr3R 14083538 intron foxo + chr3R_13_14080001 chr3R_14080001 RAL-850 2795 chr3R 14089533 14089543 chr3R 14089671 14089681 7 138 12.0 0.0 6.0 1.0 148 chr3R 14089533 5` UTR Npc2b + chr3R 14089607 intron Npc2b + chr3R 14089681 intron Npc2b + chr3R_7_14085001 chr3R_14085001 RAL-850 2796 chr3R 14091470 14091534 chr3R 14091599 14091663 19 129 10.5 2.0 6.2 2.6 193 chr3R 14091470 intron Npc2b + chr3R 14091566 intron Npc2b + chr3R 14091663 intron Npc2b + chr3R_19_14090001 chr3R_14090001 RAL-850 2797 chr3R 14093720 14093781 chr3R 14093846 14093907 29 126 12.5 9.5 11.0 2.4 187 chr3R 14093720 intron CCHa1 - chr3R 14093814 intron CCHa1 - chr3R 14093907 intron CCHa1 - chr3R_29_14090001 chr3R_14090001 RAL-850 2798 chr3R 14166687 14166697 chr3R 14167322 14167362 11 682 11.5 11.0 11.2 0.9 675 chr3R 14166687 3` UTR Dop1R1 - chr3R 14167024 3` UTR Dop1R1 - chr3R 14167362 3` UTR Dop1R1 - chr3R_11_14165001 chr3R_14165001 RAL-850 2799 chr3R 14180766 14180831 chr3R 14185581 14185646 F-element 16 4815 5.5 11.0 8.2 1.7 4880 chr3R 14180766 intron Dop1R1 - chr3R 14183206 intron Dop1R1 - chr3R 14185646 intron Dop1R1 - chr3R_16_14180001 chr3R_14180001 RAL-850 2800 chr3R 14194386 14194451 chr3R 14203585 14203634 roo 32 9198 13.5 8.5 11.0 2.7 9248 chr3R 14194386 intron Dop1R1 - chr3R 14199010 intron Dop1R1 - chr3R 14203634 intron Dop1R1 - chr3R_32_14195001 chr3R_14195001 RAL-850 2801 chr3R 14246355 14246365 chr3R 14247901 14247911 jockey 4 1546 24.0 8.0 16.0 0.2 1556 chr3R 14246355 intergenic not near genes chr3R 14247133 intergenic not near genes chr3R 14247911 intergenic not near genes chr3R_4_14245001 chr3R_14245001 RAL-850 2802 chr3R 14246371 14246414 chr3R 14247891 14247953 jockey 14 1535 9.0 6.5 7.8 1.6 1582 chr3R 14246371 intergenic not near genes chr3R 14247162 intergenic not near genes chr3R 14247953 intergenic not near genes chr3R_14_14245001 chr3R_14245001 RAL-850 2803 chr3R 14248678 14248735 chr3R 14248806 14248863 17 127 6.5 1.5 4.0 3.4 185 chr3R 14248678 intergenic not near genes chr3R 14248770 intergenic not near genes chr3R 14248863 intergenic not near genes chr3R_17_14245001 chr3R_14245001 RAL-850 2804 chr3R 14253653 14253720 chr3R 14253782 14253849 29 129 6.5 8.5 7.5 3.4 196 chr3R 14253653 intron Aats-met - chr3R 14253751 intron Aats-met - chr3R 14253849 intron Aats-met - chr3R_29_14250001 chr3R_14250001 RAL-850 2805 chr3R 14308787 14308851 chr3R 14308989 14309053 19 202 4.0 10.0 7.0 2.4 266 chr3R 14308787 intergenic su(Hw) -,RpII15 + chr3R 14308920 intergenic RpII15 +,su(Hw) - chr3R 14309053 intergenic RpII15 +,su(Hw) - chr3R_19_14305001 chr3R_14305001 RAL-850 2806 chr3R 14364013 14364091 chr3R 14364139 14364195 24 116 14.0 13.0 13.5 1.7 182 chr3R 14364013 intron NK7.1 - chr3R 14364104 intron NK7.1 - chr3R 14364195 intron NK7.1 - chr3R_24_14360001 chr3R_14360001 RAL-850 2807 chr3R 14386170 14386227 chr3R 14386300 14386361 6 133 0.0 8.5 4.2 1.2 191 chr3R 14386170 intergenic not near genes chr3R 14386266 intergenic not near genes chr3R 14386361 intergenic not near genes chr3R_6_14385001 chr3R_14385001 RAL-850 2808 chr3R 14489220 14489294 chr3R 14489626 14489699 24 405 6.5 10.0 8.2 2.6 479 chr3R 14489220 intergenic not near genes chr3R 14489460 intergenic not near genes chr3R 14489699 intergenic not near genes chr3R_24_14485001 chr3R_14485001 RAL-850 2809 chr3R 14522969 14522977 chr3R 14523100 14523108 6 131 10.5 14.0 12.2 0.5 139 chr3R 14522969 intron,exon Pde6 -,Cyp313a1 + chr3R 14523038 intron,3` UTR Pde6 -,Cyp313a1 + chr3R 14523108 intron Pde6 - chr3R_6_14520001 chr3R_14520001 RAL-850 2810 chr3R 14563978 14563991 chr3R 14564128 14564141 6 150 0.0 4.0 2.0 2.0 163 chr3R 14563978 intergenic CG8087 - chr3R 14564060 intergenic CG8087 - chr3R 14564141 intergenic CG8087 - chr3R_6_14560001 chr3R_14560001 RAL-850 2811 chr3R 14608426 14608476 chr3R 14608568 14608618 18 142 4.5 11.5 8.0 2.0 192 chr3R 14608426 intergenic stumps + chr3R 14608522 intergenic stumps + chr3R 14608618 intergenic not near genes chr3R_18_14605001 chr3R_14605001 RAL-850 2812 chr3R 14615233 14615269 chr3R 14615373 14615409 14 139 0.0 6.0 3.0 3.5 176 chr3R 14615233 intron CG14853 + chr3R 14615321 intron CG14853 + chr3R 14615409 intron CG14853 + chr3R_14_14615001 chr3R_14615001 RAL-850 2813 chr3R 14633163 14633221 chr3R 14633292 14633350 25 126 10.5 16.0 13.2 1.8 187 chr3R 14633163 intron,intron CG7886 -,Cad88C + chr3R 14633256 intron,intron CG7886 -,Cad88C + chr3R 14633350 intron,intron CG7886 -,Cad88C + chr3R_25_14630001 chr3R_14630001 RAL-850 2814 chr3R 14662265 14662338 chr3R 14662396 14662468 24 131 9.0 8.5 8.8 2.4 203 chr3R 14662265 exon Rad17 - chr3R 14662366 intron Rad17 - chr3R 14662468 exon Rad17 - chr3R_24_14660001 chr3R_14660001 RAL-850 2815 chr3R 14688105 14688119 chr3R 14688236 14688250 6 131 10.0 0.0 5.0 1.0 145 chr3R 14688105 intron Meltrin - chr3R 14688178 intron Meltrin - chr3R 14688250 intron Meltrin - chr3R_6_14685001 chr3R_14685001 RAL-850 2816 chr3R 14760490 14760523 chr3R 14760631 14760664 10 141 7.0 0.0 3.5 2.2 174 chr3R 14760490 intron jvl + chr3R 14760577 intron jvl + chr3R 14760664 intron jvl + chr3R_10_14760001 chr3R_14760001 RAL-850 2817 chr3R 14764519 14764583 chr3R 14764667 14764734 16 150 7.0 6.5 6.8 2.1 215 chr3R 14764519 intron jvl + chr3R 14764626 intron jvl + chr3R 14764734 intron jvl + chr3R_16_14760001 chr3R_14760001 RAL-850 2818 chr3R 14768927 14768994 chr3R 14769081 14769148 24 151 6.5 7.5 7.0 3.0 221 chr3R 14768927 intron jvl + chr3R 14769038 intron jvl + chr3R 14769148 intron jvl + chr3R_24_14765001 chr3R_14765001 RAL-850 2819 chr3R 14837456 14837525 chr3R 14837586 14837655 25 130 6.0 12.0 9.0 2.5 199 chr3R 14837456 intron btsz - chr3R 14837556 intron btsz - chr3R 14837655 intron btsz - chr3R_25_14835001 chr3R_14835001 RAL-850 2820 chr3R 14869822 14869854 chr3R 14869963 14869995 13 141 22.5 11.5 17.0 0.7 173 chr3R 14869822 intron btsz - chr3R 14869908 intron btsz - chr3R 14869995 intron btsz - chr3R_13_14865001 chr3R_14865001 RAL-850 2821 chr3R 14869858 14869888 chr3R 14869958 14870029 12 137 12.0 10.0 11.0 1.0 171 chr3R 14869858 intron btsz - chr3R 14869944 intron btsz - chr3R 14870029 intron btsz - chr3R_12_14865001 chr3R_14865001 RAL-850 2822 chr3R 14877825 14877893 chr3R 14877947 14878020 39 127 5.5 8.5 7.0 4.9 195 chr3R 14877825 intergenic not near genes chr3R 14877922 intergenic not near genes chr3R 14878020 intergenic not near genes chr3R_39_14875001 chr3R_14875001 RAL-850 2823 chr3R 14926897 14926923 chr3R 14927028 14927054 10 131 8.0 0.0 4.0 2.0 157 chr3R 14926897 intergenic not near genes chr3R 14926976 intergenic not near genes chr3R 14927054 intergenic not near genes chr3R_10_14925001 chr3R_14925001 RAL-850 2824 chr3R 14944850 14944894 chr3R 14944981 14945021 14 129 7.0 8.5 7.8 1.6 171 chr3R 14944850 intergenic not near genes chr3R 14944936 intergenic not near genes chr3R 14945021 intergenic not near genes chr3R_14_14940001 chr3R_14940001 RAL-850 2825 chr3R 15041352 15041419 chr3R 15045186 15045253 Doc 10 3834 0.0 4.0 2.0 3.3 3901 chr3R 15041352 intergenic not near genes chr3R 15043302 intergenic not near genes chr3R 15045253 intergenic not near genes chr3R_10_15040001 chr3R_15040001 RAL-850 2826 chr3R 15049405 15049477 chr3R 15049581 15049653 32 174 11.5 12.5 12.0 2.5 248 chr3R 15049405 intergenic not near genes chr3R 15049529 intergenic not near genes chr3R 15049653 intergenic not near genes chr3R_32_15045001 chr3R_15045001 RAL-850 2827 chr3R 15059239 15059299 chr3R 15059499 15059558 BS 4 260 0.0 4.5 2.2 1.2 319 chr3R 15059239 intron dpr9 - chr3R 15059398 intron dpr9 - chr3R 15059558 intron dpr9 - chr3R_4_15055001 chr3R_15055001 RAL-850 2828 chr3R 15071147 15071213 chr3R 15071322 15071388 33 174 6.5 14.0 10.2 2.9 241 chr3R 15071147 intron dpr9 - chr3R 15071268 intron dpr9 - chr3R 15071388 intron dpr9 - chr3R_33_15070001 chr3R_15070001 RAL-850 2829 chr3R 15075823 15075877 chr3R 15075950 15076001 9 125 7.5 0.5 4.0 1.8 178 chr3R 15075823 intron dpr9 - chr3R 15075912 intron dpr9 - chr3R 15076001 intron dpr9 - chr3R_9_15075001 chr3R_15075001 RAL-850 2830 chr3R 15079758 15079838 chr3R 15080049 15080122 pogo 28 288 9.0 0.0 4.5 5.1 364 chr3R 15079758 3` UTR CG6966 - chr3R 15079940 3` UTR CG6966 - chr3R 15080122 3` UTR CG6966 - chr3R_28_15075001 chr3R_15075001 RAL-850 2831 chr3R 15087179 15087229 chr3R 15087301 15087350 15 124 17.0 9.0 13.0 1.1 171 chr3R 15087179 intron CG6966 - chr3R 15087264 intron CG6966 - chr3R 15087350 intron CG6966 - chr3R_15_15085001 chr3R_15085001 RAL-850 2832 chr3R 15102451 15102510 chr3R 15109758 15109817 412 20 7306 12.0 6.5 9.2 2.0 7366 chr3R 15102451 intron CG42788 - chr3R 15106134 intron CG42788 - chr3R 15109817 intron CG42788 - chr3R_20_15105001 chr3R_15105001 RAL-850 2833 chr3R 15114864 15114912 chr3R 15114990 15115015 13 123 8.0 9.0 8.5 1.4 151 chr3R 15114864 intron CG42788 - chr3R 15114940 intron CG42788 - chr3R 15115015 intron CG42788 - chr3R_13_15110001 chr3R_15110001 RAL-850 2834 chr3R 15132029 15132033 chr3R 15135139 15135143 Juan 4 3110 39.5 29.5 34.5 0.1 3114 chr3R 15132029 intergenic CG42788 - chr3R 15133586 intergenic not near genes chr3R 15135143 3` UTR CG6912 - chr3R_4_15130001 chr3R_15130001 RAL-850 2835 chr3R 15132034 15132062 chr3R 15135137 15135172 Juan 38 3109 26.5 28.5 27.5 1.3 3138 chr3R 15132034 intergenic CG42788 - chr3R 15133603 intergenic not near genes chr3R 15135172 3` UTR CG6912 - chr3R_38_15130001 chr3R_15130001 RAL-850 2836 chr3R 15130873 15130906 chr3R 15141194 15141234 13 10317 48.5 72.0 60.2 0.2 10361 chr3R 15130873 intron CG42788 - chr3R 15136054 exon CG6912 - chr3R 15141234 exon CG3987 + chr3R_13_15135001 chr3R_15135001 RAL-850 2837 chr3R 15162499 15162562 chr3R 15167317 15167380 F-element 28 4817 11.5 7.0 9.2 2.7 4881 chr3R 15162499 intron Gyc88E + chr3R 15164940 intron Gyc88E + chr3R 15167380 intron Gyc88E + chr3R_28_15160001 chr3R_15160001 RAL-850 2838 chr3R 15224329 15224402 chr3R 15224514 15224593 27 189 6.5 8.5 7.5 3.2 264 chr3R 15224329 exon CG31344 - chr3R 15224461 intron CG31344 - chr3R 15224593 intron CG31344 - chr3R_27_15220001 chr3R_15220001 RAL-850 2839 chr3R 15406096 15406171 chr3R 15406227 15406306 21 133 9.0 4.5 6.8 2.7 210 chr3R 15406096 intron CG6125 - chr3R 15406201 intron CG6125 - chr3R 15406306 intron CG6125 - chr3R_21_15405001 chr3R_15405001 RAL-850 2840 chr3R 15416208 15416215 chr3R 15416338 15416345 4 130 24.5 10.5 17.5 0.2 137 chr3R 15416208 3` UTR Atx2 + chr3R 15416276 3` UTR Atx2 + chr3R 15416345 3` UTR Atx2 + chr3R_4_15415001 chr3R_15415001 RAL-850 2841 chr3R 15416217 15416234 chr3R 15416336 15416364 12 129 21.0 8.5 14.8 0.8 147 chr3R 15416217 3` UTR Atx2 + chr3R 15416290 3` UTR Atx2 + chr3R 15416364 3` UTR Atx2 + chr3R_12_15415001 chr3R_15415001 RAL-850 2842 chr3R 15416248 15416267 chr3R 15416328 15416397 10 123 11.5 12.0 11.8 0.8 149 chr3R 15416248 3` UTR Atx2 + chr3R 15416322 3` UTR Atx2 + chr3R 15416397 3` UTR Atx2 + chr3R_10_15415001 chr3R_15415001 RAL-850 2843 chr3R 15445862 15445905 chr3R 15445997 15446025 18 134 11.5 0.0 5.8 2.6 163 chr3R 15445862 exon AdamTS-A - chr3R 15445944 intron AdamTS-A - chr3R 15446025 intron AdamTS-A - chr3R_18_15445001 chr3R_15445001 RAL-850 2844 chr3R 15517556 15517626 chr3R 15517689 15517734 19 129 11.0 6.0 8.5 2.0 178 chr3R 15517556 intergenic not near genes chr3R 15517645 intergenic not near genes chr3R 15517734 intergenic not near genes chr3R_19_15515001 chr3R_15515001 RAL-850 2845 chr3R 15566160 15566170 chr3R 15566257 15566271 4 106 9.0 9.0 9.0 0.4 111 chr3R 15566160 intergenic not near genes chr3R 15566216 intergenic not near genes chr3R 15566271 intergenic not near genes chr3R_4_15565001 chr3R_15565001 RAL-850 2846 chr3R 15566179 15566187 chr3R 15566246 15566280 6 86 5.0 6.5 5.8 0.9 101 chr3R 15566179 intergenic not near genes chr3R 15566230 intergenic not near genes chr3R 15566280 intergenic not near genes chr3R_6_15565001 chr3R_15565001 RAL-850 2847 chr3R 15594655 15594671 chr3R 15594788 15594804 7 133 0.0 18.5 9.2 0.7 149 chr3R 15594655 intergenic not near genes chr3R 15594730 intergenic not near genes chr3R 15594804 intergenic not near genes chr3R_7_15590001 chr3R_15590001 RAL-850 2848 chr3R 15601125 15601189 chr3R 15608697 15608761 412 22 7570 7.5 12.5 10.0 2.0 7636 chr3R 15601125 intergenic not near genes chr3R 15604943 intergenic not near genes chr3R 15608761 intergenic not near genes chr3R_22_15600001 chr3R_15600001 RAL-850 2849 chr3R 15618697 15618758 chr3R 15626221 15626274 blood 16 7521 7.5 8.0 7.8 1.8 7577 chr3R 15618697 intergenic not near genes chr3R 15622486 intergenic not near genes chr3R 15626274 intergenic not near genes chr3R_16_15620001 chr3R_15620001 RAL-850 2850 chr3R 15635158 15635237 chr3R 15635329 15635399 17 169 0.0 8.0 4.0 3.4 241 chr3R 15635158 intergenic CG43335 + chr3R 15635278 intergenic CG43335 + chr3R 15635399 intergenic CG43335 + chr3R_17_15635001 chr3R_15635001 RAL-850 2851 chr3R 15646877 15646935 chr3R 15647011 15647071 26 139 5.5 9.5 7.5 3.1 194 chr3R 15646877 intergenic not near genes chr3R 15646974 intergenic not near genes chr3R 15647071 intergenic not near genes chr3R_26_15645001 chr3R_15645001 RAL-850 2852 chr3R 15702831 15702887 chr3R 15703054 15703127 9 228 0.0 7.5 3.8 1.9 296 chr3R 15702831 intergenic not near genes chr3R 15702979 intergenic not near genes chr3R 15703127 intergenic not near genes chr3R_9_15700001 chr3R_15700001 RAL-850 2853 chr3R 15734145 15734155 chr3R 15734286 15734287 4 138 17.5 11.0 14.2 0.3 142 chr3R 15734145 intergenic not near genes chr3R 15734216 intergenic not near genes chr3R 15734287 intergenic not near genes chr3R_4_15730001 chr3R_15730001 RAL-850 2854 chr3R 15734157 15734175 chr3R 15734262 15734292 4 117 13.5 6.5 10.0 0.4 135 chr3R 15734157 intergenic not near genes chr3R 15734224 intergenic not near genes chr3R 15734292 intergenic not near genes chr3R_4_15730001 chr3R_15730001 RAL-850 2855 chr3R 15734182 15734192 chr3R 15734308 15734323 6 133 9.5 17.0 13.2 0.4 141 chr3R 15734182 intergenic not near genes chr3R 15734252 intergenic not near genes chr3R 15734323 intergenic not near genes chr3R_6_15730001 chr3R_15730001 RAL-850 2856 chr3R 15735194 15735225 chr3R 15739964 15739995 F-element 12 4769 6.5 4.5 5.5 1.8 4801 chr3R 15735194 intergenic not near genes chr3R 15737594 intergenic not near genes chr3R 15739995 intergenic not near genes chr3R_12_15735001 chr3R_15735001 RAL-850 2857 chr3R 15778682 15778752 chr3R 15778841 15778908 21 158 4.5 7.0 5.8 3.1 226 chr3R 15778682 intergenic not near genes chr3R 15778795 intergenic not near genes chr3R 15778908 intergenic not near genes chr3R_21_15775001 chr3R_15775001 RAL-850 2858 chr3R 15808016 15808100 chr3R 15808161 15808223 36 136 6.5 6.5 6.5 4.8 207 chr3R 15808016 intron alpha-Man-IIb + chr3R 15808120 intron alpha-Man-IIb + chr3R 15808223 intron alpha-Man-IIb + chr3R_36_15805001 chr3R_15805001 RAL-850 2859 chr3R 15813285 15813345 chr3R 15813420 15813480 19 131 13.0 7.0 10.0 1.7 195 chr3R 15813285 intron alpha-Man-IIb + chr3R 15813382 intron alpha-Man-IIb + chr3R 15813480 intron alpha-Man-IIb + chr3R_19_15810001 chr3R_15810001 RAL-850 2860 chr3R 15868893 15868910 chr3R 15869023 15869040 6 130 19.5 0.0 9.8 0.6 147 chr3R 15868893 intron CG31183 - chr3R 15868966 intron CG31183 - chr3R 15869040 intron CG31183 - chr3R_6_15865001 chr3R_15865001 RAL-850 2861 chr3R 15937380 15937447 chr3R 15937512 15937559 17 126 10.0 10.5 10.2 1.5 179 chr3R 15937380 intron Sap47 + chr3R 15937470 intron Sap47 + chr3R 15937559 intron Sap47 + chr3R_17_15935001 chr3R_15935001 RAL-850 2862 chr3R 15952851 15952923 chr3R 15952982 15953054 25 130 11.0 10.5 10.8 2.1 203 chr3R 15952851 intron Sap47 + chr3R 15952952 intron Sap47 + chr3R 15953054 intron Sap47 + chr3R_25_15950001 chr3R_15950001 RAL-850 2863 chr3R 15954361 15954435 chr3R 15954488 15954537 33 120 14.0 11.0 12.5 2.4 176 chr3R 15954361 intron Sap47 + chr3R 15954449 intron Sap47 + chr3R 15954537 intron Sap47 + chr3R_33_15950001 chr3R_15950001 RAL-850 2864 chr3R 16033369 16033428 chr3R 16033500 16033559 17 131 5.5 7.0 6.2 2.4 190 chr3R 16033369 intron pnr + chr3R 16033464 intron pnr + chr3R 16033559 intron pnr + chr3R_17_16030001 chr3R_16030001 RAL-850 2865 chr3R 16047981 16047999 chr3R 16048118 16048136 8 137 21.0 8.5 14.8 0.5 155 chr3R 16047981 exon ird5 - chr3R 16048058 exon ird5 - chr3R 16048136 exon ird5 - chr3R_8_16045001 chr3R_16045001 RAL-850 2866 chr3R 16048002 16048056 chr3R 16048116 16048163 27 131 8.0 8.5 8.2 2.9 161 chr3R 16048002 exon ird5 - chr3R 16048082 exon ird5 - chr3R 16048163 exon ird5 - chr3R_27_16045001 chr3R_16045001 RAL-850 2867 chr3R 16164973 16165031 chr3R 16165107 16165159 13 126 10.0 8.5 9.2 1.3 186 chr3R 16164973 intron CG6006 + chr3R 16165066 intron CG6006 + chr3R 16165159 intron CG6006 + chr3R_13_16165001 chr3R_16165001 RAL-850 2868 chr3R 16189364 16189438 chr3R 16189817 16189891 invader4 27 453 8.5 11.5 10.0 2.5 527 chr3R 16189364 intron sra + chr3R 16189628 intron sra + chr3R 16189891 intron sra + chr3R_27_16185001 chr3R_16185001 RAL-850 2869 chr3R 16225041 16225114 chr3R 16225176 16225249 33 135 7.5 0.0 3.8 6.9 208 chr3R 16225041 intergenic not near genes chr3R 16225145 intergenic not near genes chr3R 16225249 intergenic tara + chr3R_33_16225001 chr3R_16225001 RAL-850 2870 chr3R 16226761 16226775 chr3R 16226889 16226903 13 128 9.5 18.5 14.0 0.9 142 chr3R 16226761 intron tara + chr3R 16226832 intron tara + chr3R 16226903 intron tara + chr3R_13_16225001 chr3R_16225001 RAL-850 2871 chr3R 16246479 16246555 chr3R 16246603 16246681 15 126 8.0 10.5 9.2 1.5 202 chr3R 16246479 intron tara + chr3R 16246580 intron tara + chr3R 16246681 intron tara + chr3R_15_16245001 chr3R_16245001 RAL-850 2872 chr3R 16260767 16260949 chr3R 16260898 16261097 26 144 0.0 0.0 0.0 26.0 330 chr3R 16260767 intergenic tara + chr3R 16260932 intergenic bor - chr3R 16261097 intergenic bor - chr3R_26_16260001 chr3R_16260001 RAL-850 2873 chr3R 16275535 16275608 chr3R 16275900 16275973 27 360 14.0 9.5 11.8 2.1 438 chr3R 16275535 intron gish + chr3R 16275754 intron gish + chr3R 16275973 intron gish + chr3R_27_16275001 chr3R_16275001 RAL-850 2874 chr3R 16298872 16298895 chr3R 16299007 16299030 11 135 10.5 11.5 11.0 0.9 158 chr3R 16298872 intron gish + chr3R 16298951 intron gish + chr3R 16299030 intron gish + chr3R_11_16295001 chr3R_16295001 RAL-850 2875 chr3R 16319999 16320069 chr3R 16320131 16320193 20 123 12.5 8.5 10.5 1.7 194 chr3R 16319999 intron Sulf1 - chr3R 16320096 intron Sulf1 - chr3R 16320193 intron Sulf1 - chr3R_20_16320001 chr3R_16320001 RAL-850 2876 chr3R 16332704 16332770 chr3R 16332840 16332906 27 136 8.0 7.0 7.5 3.2 202 chr3R 16332704 intron Sulf1 - chr3R 16332805 intron Sulf1 - chr3R 16332906 intron Sulf1 - chr3R_27_16330001 chr3R_16330001 RAL-850 2877 chr3R 16472560 16472676 chr3R 16472661 16472806 30 133 0.0 3.0 1.5 12.0 246 chr3R 16472560 intergenic Gyc-89Da + chr3R 16472683 5` UTR Gyc-89Da + chr3R 16472806 intron Gyc-89Da + chr3R_30_16470001 chr3R_16470001 RAL-850 2878 chr3R 16519886 16519923 chr3R 16520029 16520066 12 143 17.5 7.0 12.2 0.9 180 chr3R 16519886 intron CG42342 + chr3R 16519976 intron CG42342 + chr3R 16520066 intron CG42342 + chr3R_12_16515001 chr3R_16515001 RAL-850 2879 chr3R 16534402 16534445 chr3R 16534540 16534583 6 138 14.0 6.5 10.2 0.5 181 chr3R 16534402 intron CG42342 + chr3R 16534492 intron CG42342 + chr3R 16534583 intron CG42342 + chr3R_6_16530001 chr3R_16530001 RAL-850 2880 chr3R 16536024 16536096 chr3R 16536302 16536374 10 277 9.5 7.5 8.5 1.1 350 chr3R 16536024 intron CG42342 + chr3R 16536199 intron CG42342 + chr3R 16536374 intron CG42342 + chr3R_10_16535001 chr3R_16535001 RAL-850 2881 chr3R 16582875 16582885 chr3R 16582999 16583014 6 128 21.5 22.5 22.0 0.3 139 chr3R 16582875 intron Scp2 - chr3R 16582944 intron Scp2 - chr3R 16583014 intron Scp2 - chr3R_6_16580001 chr3R_16580001 RAL-850 2882 chr3R 16582887 16582917 chr3R 16582996 16583046 10 124 11.5 21.5 16.5 0.6 159 chr3R 16582887 intron Scp2 - chr3R 16582966 intron Scp2 - chr3R 16583046 intron Scp2 - chr3R_10_16580001 chr3R_16580001 RAL-850 2883 chr3R 16633663 16633671 chr3R 16633813 16633821 4 150 16.5 20.5 18.5 0.2 158 chr3R 16633663 intron Fas1 + chr3R 16633742 intron Fas1 + chr3R 16633821 intron Fas1 + chr3R_4_16630001 chr3R_16630001 RAL-850 2884 chr3R 16633674 16633677 chr3R 16633794 16633827 4 142 16.0 15.0 15.5 0.2 153 chr3R 16633674 intron Fas1 + chr3R 16633750 intron Fas1 + chr3R 16633827 intron Fas1 + chr3R_4_16630001 chr3R_16630001 RAL-850 2885 chr3R 16671198 16671259 chr3R 16671327 16671386 26 126 6.5 8.5 7.5 3.1 188 chr3R 16671198 intron Ubx - chr3R 16671292 intron Ubx - chr3R 16671386 intron Ubx - chr3R_26_16670001 chr3R_16670001 RAL-850 2886 chr3R 16695195 16695262 chr3R 16695343 16695410 22 148 5.0 8.0 6.5 2.9 215 chr3R 16695195 intron Ubx - chr3R 16695302 intron Ubx - chr3R 16695410 intron Ubx - chr3R_22_16695001 chr3R_16695001 RAL-850 2887 chr3R 16731913 16731938 chr3R 16732014 16732058 5 120 5.5 2.0 3.8 1.0 145 chr3R 16731913 intron Ubx - chr3R 16731986 intron Ubx - chr3R 16732058 intron Ubx - chr3R_5_16730001 chr3R_16730001 RAL-850 2888 chr3R 16756277 16756296 chr3R 16762518 16762520 diver 11 6239 14.5 5.5 10.0 1.0 6243 chr3R 16756277 intron bxd - chr3R 16759398 intron bxd - chr3R 16762520 intron bxd - chr3R_11_16755001 chr3R_16755001 RAL-850 2889 chr3R 16756297 16756301 chr3R 16762517 16762542 diver 5 6235 14.0 5.5 9.8 0.5 6245 chr3R 16756297 intron bxd - chr3R 16759420 intron bxd - chr3R 16762542 intron bxd - chr3R_5_16755001 chr3R_16755001 RAL-850 2890 chr3R 16756302 16756354 chr3R 16762514 16762570 diver 19 6232 5.5 5.5 5.5 2.9 6268 chr3R 16756302 intron bxd - chr3R 16759436 intron bxd - chr3R 16762570 intron bxd - chr3R_19_16755001 chr3R_16755001 RAL-850 2891 chr3R 16771569 16771587 chr3R 16771694 16771710 7 123 18.5 9.5 14.0 0.5 141 chr3R 16771569 intron bxd - chr3R 16771640 intron bxd - chr3R 16771710 intron bxd - chr3R_7_16770001 chr3R_16770001 RAL-850 2892 chr3R 16771588 16771640 chr3R 16771688 16771766 12 117 7.5 11.0 9.2 1.2 178 chr3R 16771588 intron bxd - chr3R 16771677 intron bxd - chr3R 16771766 intron bxd - chr3R_12_16770001 chr3R_16770001 RAL-850 2893 chr3R 16852421 16852492 chr3R 16852572 16852638 19 143 7.5 4.5 6.0 2.7 217 chr3R 16852421 intron,intron iab-8 -,iab-4 + chr3R 16852530 intron,intron iab-8 -,iab-4 + chr3R 16852638 intron,intron iab-8 -,iab-4 + chr3R_19_16850001 chr3R_16850001 RAL-850 2894 chr3R 16860289 16860367 chr3R 16860417 16860455 17 125 7.5 1.0 4.2 3.3 166 chr3R 16860289 intron iab-8 - chr3R 16860372 intron iab-8 - chr3R 16860455 intron iab-8 - chr3R_17_16860001 chr3R_16860001 RAL-850 2895 chr3R 16987681 16987685 chr3R 16987799 16987818 5 128 25.0 7.0 16.0 0.3 137 chr3R 16987681 5` UTR CG18622 - chr3R 16987750 intergenic CG18622 - chr3R 16987818 intergenic CG18622 - chr3R_5_16985001 chr3R_16985001 RAL-850 2896 chr3R 16987705 16987739 chr3R 16987797 16987831 16 104 7.5 7.0 7.2 2.0 126 chr3R 16987705 5` UTR CG18622 - chr3R 16987768 intergenic CG18622 - chr3R 16987831 intergenic CG18622 - chr3R_16_16985001 chr3R_16985001 RAL-850 2897 chr3R 17058993 17059068 chr3R 17059263 17059324 30 265 10.0 10.0 10.0 2.7 331 chr3R 17058993 intron Dad + chr3R 17059158 intron Dad + chr3R 17059324 intron Dad + chr3R_30_17055001 chr3R_17055001 RAL-850 2898 chr3R 17067466 17067536 chr3R 17067599 17067629 29 131 5.5 4.5 5.0 4.8 163 chr3R 17067466 intron Dad + chr3R 17067548 intron Dad + chr3R 17067629 intron Dad + chr3R_29_17065001 chr3R_17065001 RAL-850 2899 chr3R 17101094 17101130 chr3R 17101224 17101260 21 130 8.5 0.0 4.2 4.0 166 chr3R 17101094 intron cher - chr3R 17101177 intron cher - chr3R 17101260 intron cher - chr3R_21_17100001 chr3R_17100001 RAL-850 2900 chr3R 17138800 17138874 chr3R 17138940 17139014 38 139 4.0 6.5 5.2 6.1 214 chr3R 17138800 3` UTR CG5255 + chr3R 17138907 intergenic CG5255 +,CG5265 + chr3R 17139014 5` UTR CG5265 + chr3R_38_17135001 chr3R_17135001 RAL-850 2901 chr3R 17147897 17147903 chr3R 17148027 17148033 5 130 14.5 0.0 7.2 0.6 136 chr3R 17147897 intron m-cup - chr3R 17147965 intron m-cup - chr3R 17148033 intron m-cup - chr3R_5_17145001 chr3R_17145001 RAL-850 2902 chr3R 17176236 17176253 chr3R 17176372 17176389 6 136 14.5 3.5 9.0 0.6 153 chr3R 17176236 intron Mur89F - chr3R 17176312 intron Mur89F - chr3R 17176389 intron Mur89F - chr3R_6_17175001 chr3R_17175001 RAL-850 2903 chr3R 17184538 17184757 chr3R 17184686 17184883 53 135 0.5 0.5 0.5 35.3 345 chr3R 17184538 intron Mur89F - chr3R 17184710 intron Mur89F - chr3R 17184883 intron Mur89F - chr3R_53_17180001 chr3R_17180001 RAL-850 2904 chr3R 17209671 17209701 chr3R 17209809 17209839 10 138 11.5 11.5 11.5 0.8 168 chr3R 17209671 intergenic not near genes chr3R 17209755 intergenic not near genes chr3R 17209839 intergenic not near genes chr3R_10_17205001 chr3R_17205001 RAL-850 2905 chr3R 17214002 17214050 chr3R 17214117 17214176 5 122 6.0 9.0 7.5 0.6 174 chr3R 17214002 intergenic not near genes chr3R 17214089 intergenic not near genes chr3R 17214176 intergenic not near genes chr3R_5_17210001 chr3R_17210001 RAL-850 2906 chr3R 17260651 17260662 chr3R 17260777 17260788 9 126 5.0 4.0 4.5 1.6 137 chr3R 17260651 intron beat-IIb - chr3R 17260720 intron beat-IIb - chr3R 17260788 intron beat-IIb - chr3R_9_17260001 chr3R_17260001 RAL-850 2907 chr3R 17268623 17268699 chr3R 17268795 17268871 22 171 5.5 10.5 8.0 2.4 248 chr3R 17268623 intergenic not near genes chr3R 17268747 intergenic not near genes chr3R 17268871 intergenic not near genes chr3R_22_17265001 chr3R_17265001 RAL-850 2908 chr3R 17346062 17346128 chr3R 17346190 17346218 22 121 9.0 11.0 10.0 2.0 156 chr3R 17346062 5` UTR beat-IIa - chr3R 17346140 intron beat-IIa - chr3R 17346218 intron beat-IIa - chr3R_22_17345001 chr3R_17345001 RAL-850 2909 chr3R 17346652 17346707 chr3R 17348265 17348320 F-element 23 1613 5.5 11.5 8.5 2.4 1668 chr3R 17346652 intron beat-IIa - chr3R 17347486 intron beat-IIa - chr3R 17348320 intron beat-IIa - chr3R_23_17345001 chr3R_17345001 RAL-850 2910 chr3R 17354765 17354828 chr3R 17355031 17355097 30 267 10.0 11.0 10.5 2.6 332 chr3R 17354765 intron beat-IIa - chr3R 17354931 intron beat-IIa - chr3R 17355097 intron beat-IIa - chr3R_30_17350001 chr3R_17350001 RAL-850 2911 chr3R 17355451 17355517 chr3R 17355579 17355637 30 126 10.0 8.5 9.2 2.9 186 chr3R 17355451 intron beat-IIa - chr3R 17355544 intron beat-IIa - chr3R 17355637 intron beat-IIa - chr3R_30_17355001 chr3R_17355001 RAL-850 2912 chr3R 17371355 17371407 chr3R 17371482 17371489 8 112 9.5 6.0 7.8 0.9 134 chr3R 17371355 3` UTR CR44256 - chr3R 17371422 3` UTR CR44256 - chr3R 17371489 3` UTR CR44256 - chr3R_8_17370001 chr3R_17370001 RAL-850 2913 chr3R 17391212 17391281 chr3R 17391348 17391421 28 140 12.0 8.0 10.0 2.5 209 chr3R 17391212 5` UTR Brf - chr3R 17391316 5` UTR Brf - chr3R 17391421 intergenic CR44160 -,Brf -,sds22 + chr3R_28_17390001 chr3R_17390001 RAL-850 2914 chr3R 17406954 17407026 chr3R 17407106 17407178 31 152 9.5 12.0 10.8 2.6 224 chr3R 17406954 intron CG42798 + chr3R 17407066 5` UTR CG42798 + chr3R 17407178 exon CG42798 + chr3R_31_17405001 chr3R_17405001 RAL-850 2915 chr3R 17461151 17461222 chr3R 17461283 17461354 26 132 6.5 7.5 7.0 3.2 203 chr3R 17461151 intergenic not near genes chr3R 17461252 intergenic not near genes chr3R 17461354 intergenic not near genes chr3R_26_17460001 chr3R_17460001 RAL-850 2916 chr3R 17467443 17467518 chr3R 17467578 17467651 25 129 7.5 7.0 7.2 3.0 208 chr3R 17467443 intergenic not near genes chr3R 17467547 intergenic not near genes chr3R 17467651 intergenic not near genes chr3R_25_17465001 chr3R_17465001 RAL-850 2917 chr3R 17506336 17506390 chr3R 17506464 17506518 18 128 3.0 11.0 7.0 2.2 182 chr3R 17506336 intergenic not near genes chr3R 17506427 intergenic not near genes chr3R 17506518 intergenic not near genes chr3R_18_17505001 chr3R_17505001 RAL-850 2918 chr3R 17509193 17509248 chr3R 17516804 17516853 412 17 7598 7.5 18.5 13.0 1.2 7660 chr3R 17509193 intergenic not near genes chr3R 17513023 intergenic not near genes chr3R 17516853 intergenic not near genes chr3R_17_17510001 chr3R_17510001 RAL-850 2919 chr3R 17519694 17519765 chr3R 17519838 17519906 17 142 7.5 8.0 7.8 1.9 212 chr3R 17519694 intergenic not near genes chr3R 17519800 intergenic not near genes chr3R 17519906 intergenic not near genes chr3R_17_17515001 chr3R_17515001 RAL-850 2920 chr3R 17522222 17522249 chr3R 17522406 17522433 13 184 8.0 4.5 6.2 1.8 211 chr3R 17522222 intergenic not near genes chr3R 17522328 intergenic not near genes chr3R 17522433 intergenic not near genes chr3R_13_17520001 chr3R_17520001 RAL-850 2921 chr3R 17586143 17586177 chr3R 17586264 17586311 16 130 5.0 12.0 8.5 1.7 168 chr3R 17586143 intergenic not near genes chr3R 17586227 intergenic not near genes chr3R 17586311 intergenic not near genes chr3R_16_17585001 chr3R_17585001 RAL-850 2922 chr3R 17591255 17591282 chr3R 17591741 17591762 F-element 10 484 19.0 12.0 15.5 0.6 507 chr3R 17591255 intergenic not near genes chr3R 17591508 intergenic not near genes chr3R 17591762 intergenic not near genes chr3R_10_17590001 chr3R_17590001 RAL-850 2923 chr3R 17591284 17591322 chr3R 17591737 17591773 F-element 12 479 11.5 11.0 11.2 1.0 489 chr3R 17591284 intergenic not near genes chr3R 17591528 intergenic not near genes chr3R 17591773 intergenic not near genes chr3R_12_17590001 chr3R_17590001 RAL-850 2924 chr3R 17638273 17638337 chr3R 17638809 17638873 roo 26 535 9.5 8.5 9.0 2.6 600 chr3R 17638273 intron CG43175 + chr3R 17638573 intron CG43175 + chr3R 17638873 intron,intron CG43175 +,CR45222 + chr3R_26_17635001 chr3R_17635001 RAL-850 2925 chr3R 17655405 17655482 chr3R 17655550 17655627 23 145 3.0 6.0 4.5 4.2 222 chr3R 17655405 intron CG14322 + chr3R 17655516 intron CG14322 + chr3R 17655627 intron CG14322 + chr3R_23_17655001 chr3R_17655001 RAL-850 2926 chr3R 17657654 17657658 chr3R 17657809 17657859 INE-1 4 190 0.0 8.5 4.2 0.8 205 chr3R 17657654 intron CG14322 + chr3R 17657756 intron CG14322 + chr3R 17657859 intron CG14322 + chr3R_4_17655001 chr3R_17655001 RAL-850 2927 chr3R 17714629 17714700 chr3R 17714748 17714802 19 106 9.5 9.0 9.2 1.9 173 chr3R 17714629 intron osa - chr3R 17714716 intron osa - chr3R 17714802 intron osa - chr3R_19_17710001 chr3R_17710001 RAL-850 2928 chr3R 17734074 17734137 chr3R 17734213 17734260 24 134 8.0 13.0 10.5 2.1 186 chr3R 17734074 exon CG14321 + chr3R 17734167 3` UTR CG14321 + chr3R 17734260 3` UTR CG14321 + chr3R_24_17730001 chr3R_17730001 RAL-850 2929 chr3R 17734804 17734860 chr3R 17734968 17735024 19 164 2.5 0.0 1.2 8.6 220 chr3R 17734804 intergenic CG14321 + chr3R 17734914 intergenic not near genes chr3R 17735024 intergenic not near genes chr3R_19_17730001 chr3R_17730001 RAL-850 2930 chr3R 17758176 17758243 chr3R 17758310 17758377 29 133 10.0 6.0 8.0 3.2 201 chr3R 17758176 intron TyrR - chr3R 17758276 intron TyrR - chr3R 17758377 intron TyrR - chr3R_29_17755001 chr3R_17755001 RAL-850 2931 chr3R 17812043 17812111 chr3R 17812169 17812237 13 126 9.0 7.5 8.2 1.4 194 chr3R 17812043 intron tinc + chr3R 17812140 intron tinc + chr3R 17812237 intron tinc + chr3R_13_17810001 chr3R_17810001 RAL-850 2932 chr3R 17823159 17823235 chr3R 17823294 17823370 25 135 6.5 6.5 6.5 3.3 211 chr3R 17823159 intron tinc + chr3R 17823264 intron tinc + chr3R 17823370 intron tinc + chr3R_25_17820001 chr3R_17820001 RAL-850 2933 chr3R 17856009 17856045 chr3R 17856144 17856196 10 147 8.0 5.0 6.5 1.3 187 chr3R 17856009 intron tinc + chr3R 17856102 intron tinc + chr3R 17856196 intron tinc + chr3R_10_17855001 chr3R_17855001 RAL-850 2934 chr3R 17861324 17861363 chr3R 17861450 17861489 4 126 6.0 5.5 5.8 0.6 165 chr3R 17861324 intron tinc + chr3R 17861406 intron tinc + chr3R 17861489 intron tinc + chr3R_4_17860001 chr3R_17860001 RAL-850 2935 chr3R 17898325 17898355 chr3R 17898457 17898457 15 126 10.5 21.0 15.8 0.9 132 chr3R 17898325 intron Rim - chr3R 17898391 intron Rim - chr3R 17898457 intron Rim - chr3R_15_17895001 chr3R_17895001 RAL-850 2936 chr3R 17899043 17899055 chr3R 17899171 17899183 7 128 7.5 5.0 6.2 1.0 140 chr3R 17899043 intron Rim - chr3R 17899113 intron Rim - chr3R 17899183 intron Rim - chr3R_7_17895001 chr3R_17895001 RAL-850 2937 chr3R 17925814 17925869 chr3R 17927328 17927347 hobo 19 1508 12.5 10.5 11.5 1.5 1533 chr3R 17925814 intron cpo + chr3R 17926580 intron cpo + chr3R 17927347 intron cpo + chr3R_19_17925001 chr3R_17925001 RAL-850 2938 chr3R 17996689 17996754 chr3R 17996881 17996946 19 190 40.0 28.5 34.2 0.5 257 chr3R 17996689 intron cpo + chr3R 17996818 intron cpo + chr3R 17996946 intron cpo + chr3R_19_17995001 chr3R_17995001 RAL-850 2939 chr3R 17998743 17998809 chr3R 17999082 17999148 32 338 42.0 42.0 42.0 0.7 405 chr3R 17998743 intron cpo + chr3R 17998946 intron cpo + chr3R 17999148 intron cpo + chr3R_32_17995001 chr3R_17995001 RAL-850 2940 chr3R 17982367 17982391 chr3R 18026368 18026392 9 44002 51.5 71.0 61.2 0.1 44025 chr3R 17982367 intron cpo + chr3R 18004380 intron cpo + chr3R 18026392 intergenic not near genes chr3R_9_18000001 chr3R_18000001 RAL-850 2941 chr3R 17982361 17982415 chr3R 18026393 18026433 11 44009 56.5 66.5 61.5 0.2 44072 chr3R 17982361 intron cpo + chr3R 18004397 intron cpo + chr3R 18026433 intergenic not near genes chr3R_11_18000001 chr3R_18000001 RAL-850 2942 chr3R 18030429 18030474 chr3R 18030563 18030608 5 134 6.5 2.0 4.2 1.0 179 chr3R 18030429 intergenic not near genes chr3R 18030518 intergenic not near genes chr3R 18030608 intergenic not near genes chr3R_5_18030001 chr3R_18030001 RAL-850 2943 chr3R 18032729 18032810 chr3R 18040452 18040533 opus 14 7722 4.0 3.5 3.8 2.9 7804 chr3R 18032729 intergenic not near genes chr3R 18036631 intergenic not near genes chr3R 18040533 intergenic not near genes chr3R_14_18035001 chr3R_18035001 RAL-850 2944 chr3R 18060281 18060286 chr3R 18060420 18060430 6 143 23.5 12.0 17.8 0.3 149 chr3R 18060281 intergenic not near genes chr3R 18060356 intergenic not near genes chr3R 18060430 intergenic not near genes chr3R_6_18060001 chr3R_18060001 RAL-850 2945 chr3R 18060290 18060345 chr3R 18060413 18060489 23 138 12.5 8.5 10.5 2.0 199 chr3R 18060290 intergenic not near genes chr3R 18060390 intergenic not near genes chr3R 18060489 intergenic not near genes chr3R_23_18060001 chr3R_18060001 RAL-850 2946 chr3R 18061399 18061447 chr3R 18061541 18061589 17 142 6.5 0.0 3.2 4.0 190 chr3R 18061399 intergenic not near genes chr3R 18061494 intergenic not near genes chr3R 18061589 intergenic not near genes chr3R_17_18060001 chr3R_18060001 RAL-850 2947 chr3R 18061570 18061586 chr3R 18063194 18063210 F-element 8 1624 0.0 0.5 0.2 6.7 1640 chr3R 18061570 intergenic not near genes chr3R 18062390 intergenic not near genes chr3R 18063210 intergenic not near genes chr3R_8_18060001 chr3R_18060001 RAL-850 2948 chr3R 18064693 18064710 chr3R 18064824 18064841 11 131 0.0 14.5 7.2 1.3 148 chr3R 18064693 intergenic not near genes chr3R 18064767 intergenic not near genes chr3R 18064841 intergenic not near genes chr3R_11_18060001 chr3R_18060001 RAL-850 2949 chr3R 18064715 18064742 chr3R 18064815 18064868 12 127 0.0 12.0 6.0 1.7 153 chr3R 18064715 intergenic not near genes chr3R 18064792 intergenic not near genes chr3R 18064868 intergenic not near genes chr3R_12_18060001 chr3R_18060001 RAL-850 2950 chr3R 18067927 18068017 chr3R 18068073 18068149 17 139 0.0 3.0 1.5 6.8 222 chr3R 18067927 intergenic not near genes chr3R 18068038 intergenic not near genes chr3R 18068149 intergenic not near genes chr3R_17_18065001 chr3R_18065001 RAL-850 2951 chr3R 18122839 18122912 chr3R 18122967 18123039 14 128 4.0 3.0 3.5 3.1 200 chr3R 18122839 intron sr + chr3R 18122939 intron sr + chr3R 18123039 intron sr + chr3R_14_18120001 chr3R_18120001 RAL-850 2952 chr3R 18302941 18302978 chr3R 18303096 18303103 10 150 8.5 0.0 4.2 1.9 162 chr3R 18302941 intergenic CG7126 -,PKD - chr3R 18303022 intergenic CG7126 -,PKD - chr3R 18303103 intergenic PKD -,CG7126 - chr3R_10_18300001 chr3R_18300001 RAL-850 2953 chr3R 18331800 18331816 chr3R 18333355 18333371 hopper2 8 1555 8.5 8.5 8.5 0.8 1571 chr3R 18331800 3` UTR CG15803 - chr3R 18332586 intron CG15803 - chr3R 18333371 3` UTR CG15803 - chr3R_8_18330001 chr3R_18330001 RAL-850 2954 chr3R 18352533 18352605 chr3R 18352676 18352728 23 142 5.0 6.0 5.5 3.5 195 chr3R 18352533 intron CG15803 - chr3R 18352630 intron CG15803 - chr3R 18352728 3` UTR CG15803 - chr3R_23_18350001 chr3R_18350001 RAL-850 2955 chr3R 18464363 18464400 chr3R 18464491 18464526 4 127 3.5 6.0 4.8 0.7 163 chr3R 18464363 intron fru - chr3R 18464444 intron fru - chr3R 18464526 intron fru - chr3R_4_18460001 chr3R_18460001 RAL-850 2956 chr3R 18472234 18472295 chr3R 18472385 18472446 22 151 6.0 5.0 5.5 3.4 212 chr3R 18472234 intron fru - chr3R 18472340 intron fru - chr3R 18472446 intron fru - chr3R_22_18470001 chr3R_18470001 RAL-850 2957 chr3R 18481158 18481210 chr3R 18481297 18481344 19 136 0.0 12.0 6.0 2.7 186 chr3R 18481158 intron fru - chr3R 18481251 intron fru - chr3R 18481344 intron fru - chr3R_19_18480001 chr3R_18480001 RAL-850 2958 chr3R 18498144 18498189 chr3R 18498268 18498315 15 125 4.5 7.0 5.8 2.2 171 chr3R 18498144 intron fru - chr3R 18498230 intron fru - chr3R 18498315 intron fru - chr3R_15_18495001 chr3R_18495001 RAL-850 2959 chr3R 18501549 18501624 chr3R 18501680 18501723 25 127 7.5 13.5 10.5 2.2 174 chr3R 18501549 intron fru - chr3R 18501636 intron fru - chr3R 18501723 intron fru - chr3R_25_18500001 chr3R_18500001 RAL-850 2960 chr3R 18538314 18538369 chr3R 18538449 18538499 9 132 6.0 2.5 4.2 1.7 185 chr3R 18538314 intron fru - chr3R 18538406 intron fru - chr3R 18538499 intron fru - chr3R_9_18535001 chr3R_18535001 RAL-850 2961 chr3R 18559384 18559391 chr3R 18559511 18559518 4 127 7.5 0.0 3.8 0.8 134 chr3R 18559384 intergenic CG7691 + chr3R 18559451 intergenic CG7691 + chr3R 18559518 intergenic CG7691 + chr3R_4_18555001 chr3R_18555001 RAL-850 2962 chr3R 18562523 18562586 chr3R 18562692 18562756 17 169 4.5 6.0 5.2 2.7 233 chr3R 18562523 intergenic not near genes chr3R 18562640 intergenic not near genes chr3R 18562756 intergenic not near genes chr3R_17_18560001 chr3R_18560001 RAL-850 2963 chr3R 18565457 18565517 chr3R 18565602 18565662 18 145 11.0 13.5 12.2 1.4 205 chr3R 18565457 intergenic CG43194 -,CG43210 - chr3R 18565560 intergenic CG43194 -,CG43210 - chr3R 18565662 intergenic CG43194 -,CG43210 - chr3R_18_18565001 chr3R_18565001 RAL-850 2964 chr3R 18606462 18606524 chr3R 18610744 18610806 F-element 27 4281 14.0 10.5 12.2 2.0 4344 chr3R 18606462 intron,intron qin +,CG14304 - chr3R 18608634 intron,intron qin +,CG14304 - chr3R 18610806 intron,intron qin +,CG14304 - chr3R_27_18605001 chr3R_18605001 RAL-850 2965 chr3R 18721009 18721066 chr3R 18721195 18721255 21 187 6.0 4.0 5.0 3.5 246 chr3R 18721009 intron Cha + chr3R 18721132 intron Cha + chr3R 18721255 intron Cha + chr3R_21_18720001 chr3R_18720001 RAL-850 2966 chr3R 18729975 18730038 chr3R 18730100 18730137 27 124 11.0 13.5 12.2 2.0 162 chr3R 18729975 exon Cha + chr3R 18730056 intron Cha + chr3R 18730137 exon Cha + chr3R_27_18730001 chr3R_18730001 RAL-850 2967 chr3R 18766739 18766801 chr3R 18766867 18766916 29 127 9.0 14.0 11.5 2.3 177 chr3R 18766739 intron CG7720 - chr3R 18766828 intron CG7720 - chr3R 18766916 intron CG7720 - chr3R_29_18765001 chr3R_18765001 RAL-850 2968 chr3R 18770249 18770321 chr3R 18770381 18770453 28 132 4.0 7.5 5.8 4.1 204 chr3R 18770249 intron CG7720 - chr3R 18770351 intron CG7720 - chr3R 18770453 intron CG7720 - chr3R_28_18770001 chr3R_18770001 RAL-850 2969 chr3R 18781646 18781725 chr3R 18781771 18781826 28 120 10.0 6.0 8.0 3.1 180 chr3R 18781646 intron CG7720 - chr3R 18781736 intron CG7720 - chr3R 18781826 intron CG7720 - chr3R_28_18780001 chr3R_18780001 RAL-850 2970 chr3R 18787281 18787336 chr3R 18787419 18787469 17 135 3.0 0.0 1.5 6.8 188 chr3R 18787281 intron CG7720 - chr3R 18787375 intron CG7720 - chr3R 18787469 intron CG7720 - chr3R_17_18785001 chr3R_18785001 RAL-850 2971 chr3R 18791480 18791521 chr3R 18791577 18791596 6 105 6.0 8.0 7.0 0.8 116 chr3R 18791480 intron CG7720 - chr3R 18791538 intron CG7720 - chr3R 18791596 intron CG7720 - chr3R_6_18790001 chr3R_18790001 RAL-850 2972 chr3R 18793130 18793158 chr3R 18793295 18793323 8 165 6.0 7.0 6.5 1.1 193 chr3R 18793130 intron CG7720 - chr3R 18793226 intron CG7720 - chr3R 18793323 intron CG7720 - chr3R_8_18790001 chr3R_18790001 RAL-850 2973 chr3R 18808430 18808441 chr3R 18808551 18808568 6 125 25.0 7.5 16.2 0.3 138 chr3R 18808430 intron CG18208 - chr3R 18808499 intron CG18208 - chr3R 18808568 intron CG18208 - chr3R_6_18805001 chr3R_18805001 RAL-850 2974 chr3R 18808443 18808500 chr3R 18808550 18808625 19 116 8.5 7.0 7.8 2.2 182 chr3R 18808443 intron CG18208 - chr3R 18808534 intron CG18208 - chr3R 18808625 intron CG18208 - chr3R_19_18805001 chr3R_18805001 RAL-850 2975 chr3R 18812027 18812099 chr3R 18812155 18812227 22 128 8.5 10.5 9.5 2.1 200 chr3R 18812027 intron CG18208 - chr3R 18812127 intron CG18208 - chr3R 18812227 intron CG18208 - chr3R_22_18810001 chr3R_18810001 RAL-850 2976 chr3R 18826675 18826690 chr3R 18826925 18826945 7 253 15.5 5.0 10.2 0.6 270 chr3R 18826675 intron CG18208 - chr3R 18826810 intron CG18208 - chr3R 18826945 intron CG18208 - chr3R_7_18825001 chr3R_18825001 RAL-850 2977 chr3R 18878029 18878097 chr3R 18878167 18878235 18 135 5.0 8.5 6.8 2.3 206 chr3R 18878029 intergenic not near genes chr3R 18878132 intergenic not near genes chr3R 18878235 intergenic not near genes chr3R_18_18875001 chr3R_18875001 RAL-850 2978 chr3R 18887558 18887598 chr3R 18887684 18887729 13 127 12.5 15.5 14.0 0.9 171 chr3R 18887558 intergenic not near genes chr3R 18887644 intergenic not near genes chr3R 18887729 intergenic not near genes chr3R_13_18885001 chr3R_18885001 RAL-850 2979 chr3R 18897567 18897585 chr3R 18897693 18897711 10 126 10.5 8.0 9.2 1.0 144 chr3R 18897567 intergenic not near genes chr3R 18897639 intergenic CG14297 + chr3R 18897711 intergenic CG14297 + chr3R_10_18895001 chr3R_18895001 RAL-850 2980 chr3R 18933765 18933774 chr3R 18933895 18933897 4 126 20.0 10.0 15.0 0.2 132 chr3R 18933765 intron CG42613 + chr3R 18933831 intron CG42613 + chr3R 18933897 intron CG42613 + chr3R_4_18930001 chr3R_18930001 RAL-850 2981 chr3R 18933776 18933810 chr3R 18933881 18933905 9 104 9.5 7.5 8.5 0.9 129 chr3R 18933776 intron CG42613 + chr3R 18933840 intron CG42613 + chr3R 18933905 intron CG42613 + chr3R_9_18930001 chr3R_18930001 RAL-850 2982 chr3R 19081974 19081985 chr3R 19082103 19082114 4 129 10.5 13.0 11.8 0.3 140 chr3R 19081974 intron cdi - chr3R 19082044 intron cdi - chr3R 19082114 intron cdi - chr3R_4_19080001 chr3R_19080001 RAL-850 2983 chr3R 19117015 19117023 chr3R 19117209 19117217 7 194 26.0 0.0 13.0 0.5 202 chr3R 19117015 intron CG6040 + chr3R 19117116 intron CG6040 + chr3R 19117217 intron CG6040 + chr3R_7_19115001 chr3R_19115001 RAL-850 2984 chr3R 19136406 19136406 chr3R 19139742 19139810 Bari1 37 3347 106.0 63.5 84.8 0.4 3404 chr3R 19136406 exon Cyp12a4 + chr3R 19138108 intergenic not near genes chr3R 19139810 3` UTR Ppcs - chr3R_37_19135001 chr3R_19135001 RAL-850 2985 chr3R 19143027 19143092 chr3R 19143175 19143239 24 147 11.0 6.5 8.8 2.4 212 chr3R 19143027 intron Ppcs - chr3R 19143133 intron Ppcs - chr3R 19143239 intron Ppcs - chr3R_24_19140001 chr3R_19140001 RAL-850 2986 chr3R 19193002 19193003 chr3R 19197286 19197357 F-element 5 4339 1.0 6.0 3.5 1.1 4355 chr3R 19193002 intron CG31475 + chr3R 19195180 intron CG31475 + chr3R 19197357 intron CG31475 + chr3R_5_19195001 chr3R_19195001 RAL-850 2987 chr3R 19208653 19208663 chr3R 19208785 19208800 9 136 11.5 2.0 6.8 1.2 147 chr3R 19208653 intergenic not near genes chr3R 19208726 intergenic not near genes chr3R 19208800 intergenic not near genes chr3R_9_19205001 chr3R_19205001 RAL-850 2988 chr3R 19276880 19276947 chr3R 19277010 19277077 9 130 3.0 0.0 1.5 3.6 197 chr3R 19276880 intergenic not near genes chr3R 19276978 intergenic not near genes chr3R 19277077 intergenic not near genes chr3R_9_19275001 chr3R_19275001 RAL-850 2989 chr3R 19340356 19340425 chr3R 19340482 19340552 22 127 8.0 9.0 8.5 2.3 196 chr3R 19340356 intergenic not near genes chr3R 19340454 intergenic not near genes chr3R 19340552 intergenic not near genes chr3R_22_19340001 chr3R_19340001 RAL-850 2990 chr3R 19344622 19344692 chr3R 19344807 19344877 23 185 9.5 6.5 8.0 2.6 255 chr3R 19344622 intergenic not near genes chr3R 19344750 intergenic not near genes chr3R 19344877 intergenic not near genes chr3R_23_19340001 chr3R_19340001 RAL-850 2991 chr3R 19417501 19417558 chr3R 19417638 19417706 15 142 0.0 3.5 1.8 5.4 205 chr3R 19417501 intron CG31221 + chr3R 19417604 intron CG31221 + chr3R 19417706 intron CG31221 + chr3R_15_19415001 chr3R_19415001 RAL-850 2992 chr3R 19426034 19426050 chr3R 19426262 19426276 11 226 18.5 5.5 12.0 0.8 242 chr3R 19426034 intron CG31221 + chr3R 19426155 intron CG31221 + chr3R 19426276 intron CG31221 + chr3R_11_19425001 chr3R_19425001 RAL-850 2993 chr3R 19426052 19426109 chr3R 19426254 19426291 23 218 6.5 4.5 5.5 3.5 239 chr3R 19426052 intron CG31221 + chr3R 19426172 intron CG31221 + chr3R 19426291 intron CG31221 + chr3R_23_19425001 chr3R_19425001 RAL-850 2994 chr3R 19427142 19427214 chr3R 19428297 19428356 33 1153 11.5 9.5 10.5 2.9 1214 chr3R 19427142 intron CG31221 + chr3R 19427749 intron CG31221 + chr3R 19428356 intron CG31221 + chr3R_33_19425001 chr3R_19425001 RAL-850 2995 chr3R 19494372 19494406 chr3R 19494502 19494536 10 130 10.0 12.0 11.0 0.8 164 chr3R 19494372 intron Dys + chr3R 19494454 intron Dys + chr3R 19494536 intron Dys + chr3R_10_19490001 chr3R_19490001 RAL-850 2996 chr3R 19542950 19542960 chr3R 19543275 19543285 5 324 20.0 6.0 13.0 0.4 335 chr3R 19542950 intron Dys + chr3R 19543118 intron Dys + chr3R 19543285 intron Dys + chr3R_5_19540001 chr3R_19540001 RAL-850 2997 chr3R 19542961 19543024 chr3R 19543273 19543308 27 317 4.5 6.0 5.2 4.4 347 chr3R 19542961 intron Dys + chr3R 19543134 intron Dys + chr3R 19543308 intron Dys + chr3R_27_19540001 chr3R_19540001 RAL-850 2998 chr3R 19599131 19599189 chr3R 19599244 19599295 20 115 4.5 6.0 5.2 3.2 164 chr3R 19599131 intergenic Cpr92A - chr3R 19599213 intergenic Cpr92A - chr3R 19599295 intergenic Cpr92A - chr3R_20_19595001 chr3R_19595001 RAL-850 2999 chr3R 19622946 19622974 chr3R 19623098 19623141 4 156 3.0 5.5 4.2 0.8 195 chr3R 19622946 intron CG6231 - chr3R 19623044 intron CG6231 - chr3R 19623141 intron CG6231 - chr3R_4_19620001 chr3R_19620001 RAL-850 3000 chr3R 19702277 19702346 chr3R 19702409 19702478 28 132 9.0 7.5 8.2 3.0 201 chr3R 19702277 intergenic not near genes chr3R 19702378 intergenic not near genes chr3R 19702478 intergenic not near genes chr3R_28_19700001 chr3R_19700001 RAL-850 3001 chr3R 19733989 19734010 chr3R 19734117 19734137 9 127 6.0 16.5 11.2 0.7 148 chr3R 19733989 intron GluClalpha + chr3R 19734063 intron GluClalpha + chr3R 19734137 intron GluClalpha + chr3R_9_19730001 chr3R_19730001 RAL-850 3002 chr3R 19744197 19744207 chr3R 19749491 19749501 Rt1a 7 5294 25.0 16.0 20.5 0.3 5304 chr3R 19744197 intron,intron GluClalpha +,CR43488 - chr3R 19746849 intron GluClalpha + chr3R 19749501 intron GluClalpha + chr3R_7_19745001 chr3R_19745001 RAL-850 3003 chr3R 19763172 19763186 chr3R 19763311 19763326 6 140 17.0 7.5 12.2 0.5 154 chr3R 19763172 intron GluClalpha + chr3R 19763249 intron GluClalpha + chr3R 19763326 intron GluClalpha + chr3R_6_19760001 chr3R_19760001 RAL-850 3004 chr3R 19763188 19763241 chr3R 19763303 19763373 31 134 7.0 6.5 6.8 4.0 185 chr3R 19763188 intron GluClalpha + chr3R 19763280 intron GluClalpha + chr3R 19763373 intron GluClalpha + chr3R_31_19760001 chr3R_19760001 RAL-850 3005 chr3R 19830834 19830881 chr3R 19830961 19831008 6 127 0.0 5.5 2.8 1.6 174 chr3R 19830834 intron bnl - chr3R 19830921 intron bnl - chr3R 19831008 intron bnl - chr3R_6_19830001 chr3R_19830001 RAL-850 3006 chr3R 19943830 19943853 chr3R 19943960 19943982 13 129 14.5 7.5 11.0 1.1 152 chr3R 19943830 intron Hs6st - chr3R 19943906 intron Hs6st - chr3R 19943982 intron Hs6st - chr3R_13_19940001 chr3R_19940001 RAL-850 3007 chr3R 19955028 19955100 chr3R 19956033 19956099 34 1004 4.5 7.5 6.0 4.9 1071 chr3R 19955028 intron Hs6st - chr3R 19955564 intron Hs6st - chr3R 19956099 intron Hs6st - chr3R_34_19955001 chr3R_19955001 RAL-850 3008 chr3R 19957232 19957297 chr3R 19957343 19957368 17 117 13.0 10.5 11.8 1.3 136 chr3R 19957232 intron Hs6st - chr3R 19957300 intron Hs6st - chr3R 19957368 intron Hs6st - chr3R_17_19955001 chr3R_19955001 RAL-850 3009 chr3R 20046573 20046593 chr3R 20049736 20049812 31 3171 69.0 63.0 66.0 0.5 3239 chr3R 20046573 intron,exon,3` UTR CG17193 -,CG33934 +,Indy-2 + chr3R 20048192 intron,exon,3` UTR CG17193 -,CG33934 +,Indy-2 + chr3R 20049812 5` UTR CG17193 - chr3R_31_20045001 chr3R_20045001 RAL-850 3010 chr3R 20066073 20066132 chr3R 20066313 20066371 18 239 12.5 0.5 6.5 2.4 298 chr3R 20066073 intergenic not near genes chr3R 20066222 intergenic not near genes chr3R 20066371 intergenic not near genes chr3R_18_20065001 chr3R_20065001 RAL-850 3011 chr3R 20066511 20066584 chr3R 20066797 20066870 20 285 1.5 7.5 4.5 3.6 359 chr3R 20066511 intergenic not near genes chr3R 20066690 intergenic not near genes chr3R 20066870 intergenic not near genes chr3R_20_20065001 chr3R_20065001 RAL-850 3012 chr3R 20076991 20077053 chr3R 20077127 20077189 27 134 9.0 8.5 8.8 2.8 198 chr3R 20076991 intergenic not near genes chr3R 20077090 intergenic not near genes chr3R 20077189 intergenic not near genes chr3R_27_20075001 chr3R_20075001 RAL-850 3013 chr3R 20092849 20092864 chr3R 20092972 20092980 5 121 10.5 14.5 12.5 0.4 131 chr3R 20092849 intergenic not near genes chr3R 20092914 intergenic not near genes chr3R 20092980 intergenic not near genes chr3R_5_20090001 chr3R_20090001 RAL-850 3014 chr3R 20092870 20092875 chr3R 20092970 20092996 4 108 11.0 14.5 12.8 0.3 126 chr3R 20092870 intergenic not near genes chr3R 20092933 intergenic not near genes chr3R 20092996 intergenic not near genes chr3R_4_20090001 chr3R_20090001 RAL-850 3015 chr3R 20109494 20109560 chr3R 20114748 20114816 copia 17 5255 4.0 5.5 4.8 2.9 5322 chr3R 20109494 intergenic not near genes chr3R 20112155 intergenic not near genes chr3R 20114816 intergenic CG10887 + chr3R_17_20110001 chr3R_20110001 RAL-850 3016 chr3R 20117857 20117908 chr3R 20118396 20118447 22 537 10.0 12.0 11.0 1.8 590 chr3R 20117857 intergenic not near genes chr3R 20118152 intergenic not near genes chr3R 20118447 intergenic not near genes chr3R_22_20115001 chr3R_20115001 RAL-850 3017 chr3R 20117911 20117919 chr3R 20118387 20118427 4 512 8.5 9.0 8.8 0.4 516 chr3R 20117911 intergenic not near genes chr3R 20118169 intergenic not near genes chr3R 20118427 intergenic not near genes chr3R_4_20115001 chr3R_20115001 RAL-850 3018 chr3R 20156651 20156715 chr3R 20165871 20165935 roo 34 9219 7.5 12.0 9.8 3.1 9284 chr3R 20156651 intergenic not near genes chr3R 20161293 intergenic not near genes chr3R 20165935 intergenic not near genes chr3R_34_20160001 chr3R_20160001 RAL-850 3019 chr3R 20195206 20195256 chr3R 20195311 20195342 13 110 9.5 12.5 11.0 1.1 136 chr3R 20195206 intergenic not near genes chr3R 20195274 intergenic not near genes chr3R 20195342 intergenic not near genes chr3R_13_20195001 chr3R_20195001 RAL-850 3020 chr3R 20203906 20203921 chr3R 20204037 20204052 6 130 4.0 8.0 6.0 0.9 146 chr3R 20203906 intergenic not near genes chr3R 20203979 intergenic not near genes chr3R 20204052 intergenic not near genes chr3R_6_20200001 chr3R_20200001 RAL-850 3021 chr3R 20205516 20205595 chr3R 20205688 20205767 24 172 8.0 8.0 8.0 2.7 251 chr3R 20205516 intron Nlg4 + chr3R 20205642 intron Nlg4 + chr3R 20205767 intron Nlg4 + chr3R_24_20205001 chr3R_20205001 RAL-850 3022 chr3R 20231461 20231472 chr3R 20231590 20231601 6 129 46.5 42.5 44.5 0.1 140 chr3R 20231461 intron Nlg4 + chr3R 20231531 intron Nlg4 + chr3R 20231601 intron Nlg4 + chr3R_6_20230001 chr3R_20230001 RAL-850 3023 chr3R 20231454 20231520 chr3R 20231603 20231649 12 131 52.5 34.0 43.2 0.3 195 chr3R 20231454 intron Nlg4 + chr3R 20231552 intron Nlg4 + chr3R 20231649 intron Nlg4 + chr3R_12_20230001 chr3R_20230001 RAL-850 3024 chr3R 20245274 20245293 chr3R 20248934 20248953 F-element 11 3660 0.0 4.0 2.0 3.7 3679 chr3R 20245274 3` UTR Nlg4 + chr3R 20247114 intergenic not near genes chr3R 20248953 intergenic not near genes chr3R_11_20245001 chr3R_20245001 RAL-850 3025 chr3R 20252170 20252225 chr3R 20252298 20252353 11 128 2.0 0.0 1.0 5.5 183 chr3R 20252170 intergenic not near genes chr3R 20252262 intergenic not near genes chr3R 20252353 intergenic cic + chr3R_11_20250001 chr3R_20250001 RAL-850 3026 chr3R 20256791 20256861 chr3R 20256916 20256989 18 127 1.5 5.0 3.2 4.3 198 chr3R 20256791 intron cic + chr3R 20256890 intron cic + chr3R 20256989 intron cic + chr3R_18_20255001 chr3R_20255001 RAL-850 3027 chr3R 20266507 20266527 chr3R 20273028 20273048 Burdock 8 6521 0.0 20.0 10.0 0.7 6541 chr3R 20266507 intron cic + chr3R 20269778 intron cic + chr3R 20273048 intron cic + chr3R_8_20265001 chr3R_20265001 RAL-850 3028 chr3R 20278494 20278561 chr3R 20278715 20278782 24 221 7.0 6.5 6.8 3.1 288 chr3R 20278494 intron cic + chr3R 20278638 intron cic + chr3R 20278782 intron cic + chr3R_24_20275001 chr3R_20275001 RAL-850 3029 chr3R 20282225 20282305 chr3R 20282351 20282429 24 125 2.0 9.0 5.5 3.7 204 chr3R 20282225 intron cic + chr3R 20282327 intron cic + chr3R 20282429 intron cic + chr3R_24_20280001 chr3R_20280001 RAL-850 3030 chr3R 20283538 20283557 chr3R 20283668 20283686 6 129 5.0 6.5 5.8 0.9 148 chr3R 20283538 intron cic + chr3R 20283612 intron cic + chr3R 20283686 intron cic + chr3R_6_20280001 chr3R_20280001 RAL-850 3031 chr3R 20308145 20308207 chr3R 20308283 20308356 22 145 10.5 0.0 5.2 3.5 211 chr3R 20308145 intergenic not near genes chr3R 20308250 intergenic not near genes chr3R 20308356 intergenic not near genes chr3R_22_20305001 chr3R_20305001 RAL-850 3032 chr3R 20330962 20331021 chr3R 20331497 20331557 roo 18 536 8.0 8.5 8.2 2.0 595 chr3R 20330962 intergenic Sirt2 + chr3R 20331260 intergenic Sirt2 + chr3R 20331557 intergenic not near genes chr3R_18_20330001 chr3R_20330001 RAL-850 3033 chr3R 20345331 20345395 chr3R 20345470 20345534 14 139 0.0 6.0 3.0 3.5 203 chr3R 20345331 intergenic not near genes chr3R 20345432 intergenic not near genes chr3R 20345534 intergenic not near genes chr3R_14_20345001 chr3R_20345001 RAL-850 3034 chr3R 20367315 20367361 chr3R 20367441 20367478 10 118 2.0 11.5 6.8 1.3 163 chr3R 20367315 intergenic not near genes chr3R 20367396 intergenic not near genes chr3R 20367478 intergenic not near genes chr3R_10_20365001 chr3R_20365001 RAL-850 3035 chr3R 20430851 20430891 chr3R 20430982 20431022 13 129 5.0 13.0 9.0 1.3 171 chr3R 20430851 intron Gfrl - chr3R 20430936 intron Gfrl - chr3R 20431022 intron Gfrl - chr3R_13_20430001 chr3R_20430001 RAL-850 3036 chr3R 20450073 20450145 chr3R 20450203 20450280 9 133 3.5 0.0 1.8 3.2 207 chr3R 20450073 intron Gfrl - chr3R 20450176 intron Gfrl - chr3R 20450280 intron Gfrl - chr3R_9_20450001 chr3R_20450001 RAL-850 3037 chr3R 20506523 20506605 chr3R 20507387 20507458 BS 21 856 0.0 9.5 4.8 3.6 935 chr3R 20506523 intergenic Or92a + chr3R 20506990 intergenic CG4288 - chr3R 20507458 3` UTR CG4288 - chr3R_21_20505001 chr3R_20505001 RAL-850 3038 chr3R 20512953 20513021 chr3R 20515706 20515774 opus 9 2753 9.5 0.0 4.8 1.6 2821 chr3R 20512953 intergenic CG4288 - chr3R 20514364 intergenic not near genes chr3R 20515774 intergenic not near genes chr3R_9_20510001 chr3R_20510001 RAL-850 3039 chr3R 20545925 20546000 chr3R 20546063 20546135 19 134 5.0 4.5 4.8 3.3 210 chr3R 20545925 intron Stat92E - chr3R 20546030 intron Stat92E - chr3R 20546135 intron Stat92E - chr3R_19_20545001 chr3R_20545001 RAL-850 3040 chr3R 20594436 20594511 chr3R 20594576 20594656 16 142 3.5 0.0 1.8 5.7 220 chr3R 20594436 intron bon + chr3R 20594546 intron bon + chr3R 20594656 intron bon + chr3R_16_20590001 chr3R_20590001 RAL-850 3041 chr3R 20684169 20684227 chr3R 20684303 20684361 31 134 10.5 2.5 6.5 4.1 192 chr3R 20684169 intergenic not near genes chr3R 20684265 intergenic not near genes chr3R 20684361 intergenic not near genes chr3R_31_20680001 chr3R_20680001 RAL-850 3042 chr3R 20722806 20722881 chr3R 20722983 20723058 39 171 7.5 8.5 8.0 4.3 252 chr3R 20722806 intergenic not near genes chr3R 20722932 intergenic not near genes chr3R 20723058 intergenic not near genes chr3R_39_20720001 chr3R_20720001 RAL-850 3043 chr3R 20730883 20731057 chr3R 20731033 20731170 20 141 0.0 0.0 0.0 20.0 287 chr3R 20730883 intergenic not near genes chr3R 20731026 intergenic not near genes chr3R 20731170 intergenic CG31205 + chr3R_20_20730001 chr3R_20730001 RAL-850 3044 chr3R 20771703 20771708 chr3R 20771833 20771839 5 131 0.5 19.0 9.8 0.5 136 chr3R 20771703 intron,intron Syp +,Takl1 - chr3R 20771771 intron,intron Syp +,Takl1 - chr3R 20771839 intron,exon Syp +,Takl1 - chr3R_5_20770001 chr3R_20770001 RAL-850 3045 chr3R 20771709 20771719 chr3R 20771814 20771850 6 127 0.0 15.0 7.5 0.7 141 chr3R 20771709 intron,intron Syp +,Takl1 - chr3R 20771780 intron,intron Syp +,Takl1 - chr3R 20771850 intron,exon Syp +,Takl1 - chr3R_6_20770001 chr3R_20770001 RAL-850 3046 chr3R 20787388 20787458 chr3R 20787529 20787599 40 140 6.5 6.0 6.2 5.6 211 chr3R 20787388 intron Syp + chr3R 20787494 intron Syp + chr3R 20787599 intron Syp + chr3R_40_20785001 chr3R_20785001 RAL-850 3047 chr3R 20828564 20828610 chr3R 20828867 20828913 18 301 16.0 8.0 12.0 1.4 349 chr3R 20828564 intron AdSS - chr3R 20828738 intron AdSS - chr3R 20828913 intron AdSS - chr3R_18_20825001 chr3R_20825001 RAL-850 3048 chr3R 20854447 20854504 chr3R 20859282 20859344 Doc 16 4837 6.5 11.0 8.8 1.6 4897 chr3R 20854447 intron Ir93a - chr3R 20856896 intron Ir93a - chr3R 20859344 exon Ir93a - chr3R_16_20855001 chr3R_20855001 RAL-850 3049 chr3R 20870205 20870222 chr3R 20870340 20870357 12 134 20.0 5.5 12.8 0.9 152 chr3R 20870205 intergenic not near genes chr3R 20870281 intergenic not near genes chr3R 20870357 intergenic not near genes chr3R_12_20870001 chr3R_20870001 RAL-850 3050 chr3R 20870223 20870277 chr3R 20870337 20870412 27 131 9.0 5.5 7.2 3.3 189 chr3R 20870223 intergenic not near genes chr3R 20870318 intergenic not near genes chr3R 20870412 intergenic not near genes chr3R_27_20870001 chr3R_20870001 RAL-850 3051 chr3R 20936037 20936105 chr3R 20936164 20936232 11 127 5.0 5.5 5.2 1.8 195 chr3R 20936037 intron CG31191 - chr3R 20936134 intron CG31191 - chr3R 20936232 intron CG31191 - chr3R_11_20935001 chr3R_20935001 RAL-850 3052 chr3R 20979437 20979507 chr3R 20979563 20979633 25 124 6.5 4.0 5.2 4.0 196 chr3R 20979437 intron Calx + chr3R 20979535 intron Calx + chr3R 20979633 intron Calx + chr3R_25_20975001 chr3R_20975001 RAL-850 3053 chr3R 21049132 21049204 chr3R 21049316 21049388 25 183 0.0 8.5 4.2 4.8 256 chr3R 21049132 intergenic CG7079 - chr3R 21049260 intergenic CG7079 - chr3R 21049388 intergenic not near genes chr3R_25_21045001 chr3R_21045001 RAL-850 3054 chr3R 21107988 21108047 chr3R 21108299 21108358 9 311 10.0 7.0 8.5 0.9 370 chr3R 21107988 intergenic Sec15 -,rtet + chr3R 21108173 intergenic Sec15 -,rtet + chr3R 21108358 intergenic rtet +,Sec15 - chr3R_9_21105001 chr3R_21105001 RAL-850 3055 chr3R 21132584 21132635 chr3R 21132717 21132767 16 133 6.5 0.0 3.2 3.8 183 chr3R 21132584 3` UTR Ice2 + chr3R 21132676 3` UTR Ice2 + chr3R 21132767 exon CG7009 - chr3R_16_21130001 chr3R_21130001 RAL-850 3056 chr3R 21141631 21141691 chr3R 21150162 21150221 Tirant 21 8530 12.5 13.5 13.0 1.5 8590 chr3R 21141631 intron SNF4Agamma + chr3R 21145926 intron SNF4Agamma + chr3R 21150221 intron SNF4Agamma + chr3R_21_21145001 chr3R_21145001 RAL-850 3057 chr3R 21155720 21155767 chr3R 21155862 21155908 10 141 7.0 5.5 6.2 1.4 188 chr3R 21155720 intron SNF4Agamma + chr3R 21155814 intron SNF4Agamma + chr3R 21155908 intron SNF4Agamma + chr3R_10_21155001 chr3R_21155001 RAL-850 3058 chr3R 21183200 21183261 chr3R 21183328 21183389 19 127 12.0 10.5 11.2 1.6 189 chr3R 21183200 intron SNF4Agamma + chr3R 21183294 intron SNF4Agamma + chr3R 21183389 intron SNF4Agamma + chr3R_19_21180001 chr3R_21180001 RAL-850 3059 chr3R 21188049 21188339 chr3R 21188208 21188471 10 148 0.0 0.0 0.0 10.0 422 chr3R 21188049 intron SNF4Agamma + chr3R 21188260 intron SNF4Agamma + chr3R 21188471 intron SNF4Agamma + chr3R_10_21185001 chr3R_21185001 RAL-850 3060 chr3R 21188354 21188408 chr3R 21188486 21188540 8 127 0.0 6.0 3.0 2.0 186 chr3R 21188354 intron SNF4Agamma + chr3R 21188447 intron SNF4Agamma + chr3R 21188540 intron SNF4Agamma + chr3R_8_21185001 chr3R_21185001 RAL-850 3061 chr3R 21240722 21240810 chr3R 21240869 21240938 4 142 0.0 0.0 0.0 4.0 216 chr3R 21240722 intergenic not near genes chr3R 21240830 intergenic not near genes chr3R 21240938 intergenic not near genes chr3R_4_21240001 chr3R_21240001 RAL-850 3062 chr3R 21241949 21242014 chr3R 21242075 21242140 33 124 11.0 10.0 10.5 2.9 191 chr3R 21241949 intergenic not near genes chr3R 21242044 intergenic not near genes chr3R 21242140 intergenic CG5892 + chr3R_33_21240001 chr3R_21240001 RAL-850 3063 chr3R 21274327 21274619 chr3R 21274471 21274751 46 140 13.5 6.0 9.8 4.3 424 chr3R 21274327 3` UTR CG3301 - chr3R 21274539 3` UTR CG3301 - chr3R 21274751 intron CG3301 - chr3R_46_21270001 chr3R_21270001 RAL-850 3064 chr3R 21322925 21323005 chr3R 21323054 21323137 19 128 7.0 5.0 6.0 2.7 212 chr3R 21322925 exon CG16791 - chr3R 21323031 intron CG16791 - chr3R 21323137 intron CG16791 - chr3R_19_21320001 chr3R_21320001 RAL-850 3065 chr3R 21461000 21461008 chr3R 21461140 21461148 4 140 5.0 0.0 2.5 1.1 148 chr3R 21461000 intergenic not near genes chr3R 21461074 intergenic not near genes chr3R 21461148 intergenic not near genes chr3R_4_21460001 chr3R_21460001 RAL-850 3066 chr3R 21464363 21464420 chr3R 21464499 21464554 10 135 4.5 3.5 4.0 2.0 191 chr3R 21464363 intergenic not near genes chr3R 21464458 intergenic not near genes chr3R 21464554 intergenic not near genes chr3R_10_21460001 chr3R_21460001 RAL-850 3067 chr3R 21471972 21471978 chr3R 21472103 21472103 4 130 21.5 9.0 15.2 0.2 131 chr3R 21471972 intergenic not near genes chr3R 21472038 intergenic not near genes chr3R 21472103 intergenic not near genes chr3R_4_21470001 chr3R_21470001 RAL-850 3068 chr3R 21471981 21472027 chr3R 21472102 21472158 24 129 9.5 8.5 9.0 2.4 177 chr3R 21471981 intergenic not near genes chr3R 21472070 intergenic not near genes chr3R 21472158 intergenic not near genes chr3R_24_21470001 chr3R_21470001 RAL-850 3069 chr3R 21481338 21481344 chr3R 21481479 21481485 7 141 20.0 0.0 10.0 0.6 147 chr3R 21481338 intergenic not near genes chr3R 21481412 intergenic not near genes chr3R 21481485 intergenic not near genes chr3R_7_21480001 chr3R_21480001 RAL-850 3070 chr3R 21519940 21520128 chr3R 21520091 21520272 32 151 0.0 0.0 0.0 32.0 332 chr3R 21519940 intergenic not near genes chr3R 21520106 intergenic not near genes chr3R 21520272 intergenic not near genes chr3R_32_21520001 chr3R_21520001 RAL-850 3071 chr3R 21618079 21618129 chr3R 21618212 21618275 5 143 2.0 4.0 3.0 1.2 196 chr3R 21618079 intron InR - chr3R 21618177 intron InR - chr3R 21618275 intron InR - chr3R_5_21615001 chr3R_21615001 RAL-850 3072 chr3R 21624064 21624120 chr3R 21624208 21624264 20 142 7.0 9.0 8.0 2.2 200 chr3R 21624064 exon E2f - chr3R 21624164 intron E2f - chr3R 21624264 intron E2f - chr3R_20_21620001 chr3R_21620001 RAL-850 3073 chr3R 21633792 21633864 chr3R 21633946 21633990 26 148 3.5 6.5 5.0 4.3 198 chr3R 21633792 intron E2f - chr3R 21633891 intron E2f - chr3R 21633990 intron E2f - chr3R_26_21630001 chr3R_21630001 RAL-850 3074 chr3R 21650385 21650434 chr3R 21650893 21650940 10 517 8.5 4.0 6.2 1.4 555 chr3R 21650385 intron E2f - chr3R 21650662 intron E2f - chr3R 21650940 intron E2f - chr3R_10_21650001 chr3R_21650001 RAL-850 3075 chr3R 21731789 21731809 chr3R 21731947 21731966 5 158 11.0 3.5 7.2 0.6 177 chr3R 21731789 intergenic not near genes chr3R 21731878 intergenic not near genes chr3R 21731966 intergenic not near genes chr3R_5_21730001 chr3R_21730001 RAL-850 3076 chr3R 21733965 21733996 chr3R 21734127 21734158 6 162 15.0 4.5 9.8 0.6 193 chr3R 21733965 intergenic not near genes chr3R 21734062 intergenic not near genes chr3R 21734158 intergenic not near genes chr3R_6_21730001 chr3R_21730001 RAL-850 3077 chr3R 21761077 21761150 chr3R 21768519 21768525 mdg1 33 7436 9.5 12.0 10.8 2.8 7448 chr3R 21761077 exon CG42335 + chr3R 21764801 intron CG42335 + chr3R 21768525 exon CG42335 + chr3R_33_21760001 chr3R_21760001 RAL-850 3078 chr3R 21784809 21784890 chr3R 21784957 21785034 8 144 5.5 4.0 4.8 1.4 225 chr3R 21784809 3` UTR,3` UTR CASK -,CRG - chr3R 21784922 3` UTR,3` UTR CASK -,CRG - chr3R 21785034 3` UTR,3` UTR CASK -,CRG - chr3R_8_21780001 chr3R_21780001 RAL-850 3079 chr3R 21800445 21800515 chr3R 21800580 21800650 24 135 8.0 7.5 7.8 2.7 205 chr3R 21800445 intron CASK - chr3R 21800548 intron CASK - chr3R 21800650 intron CASK - chr3R_24_21800001 chr3R_21800001 RAL-850 3080 chr3R 21824912 21824932 chr3R 21825052 21825072 7 139 29.5 5.5 17.5 0.4 160 chr3R 21824912 intergenic not near genes chr3R 21824992 intergenic not near genes chr3R 21825072 intergenic not near genes chr3R_7_21820001 chr3R_21820001 RAL-850 3081 chr3R 21824933 21824946 chr3R 21825050 21825070 5 130 24.5 5.5 15.0 0.3 137 chr3R 21824933 intergenic not near genes chr3R 21825002 intergenic not near genes chr3R 21825070 intergenic not near genes chr3R_5_21820001 chr3R_21820001 RAL-850 3082 chr3R 21824947 21824987 chr3R 21825049 21825089 26 123 11.0 5.5 8.2 2.8 142 chr3R 21824947 intergenic not near genes chr3R 21825018 intergenic not near genes chr3R 21825089 intergenic not near genes chr3R_26_21825001 chr3R_21825001 RAL-850 3083 chr3R 21903492 21903635 chr3R 21903622 21903782 13 144 0.0 0.0 0.0 13.0 290 chr3R 21903492 intron CG6678 + chr3R 21903637 intron CG6678 + chr3R 21903782 intron CG6678 + chr3R_13_21900001 chr3R_21900001 RAL-850 3084 chr3R 8339246 8339246 chr3R 21907534 21907534 5 13568288 27.5 40.0 33.8 0.1 13568288 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907534 intergenic CG6678 + chr3R_5_15120001 chr3R_15120001 RAL-850 3085 chr3R 21907534 21907534 chr3R 28831799 28831804 15 6924268 37.0 31.5 34.2 0.4 6924270 chr3R 21907534 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831804 intron WASp - chr3R_15_25365001 chr3R_25365001 RAL-850 3086 chr3R 8339246 8339247 chr3R 21907535 21907535 9 13568288 27.5 40.5 34.0 0.3 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_9_15120001 chr3R_15120001 RAL-850 3087 chr3R 9620956 9620956 chr3R 21907535 21907535 6 12286579 18.0 40.5 29.2 0.2 12286579 chr3R 9620956 intron CG8312 + chr3R 15764246 intergenic not near genes chr3R 21907535 intergenic CG6678 + chr3R_6_15760001 chr3R_15760001 RAL-850 3088 chr3R 21907535 21907535 chr3R 28831801 28831802 23 6924266 37.5 30.5 34.0 0.7 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_23_25365001 chr3R_25365001 RAL-850 3089 chr3R 21907536 21907536 chr3R 28831801 28831804 30 6924266 38.0 30.5 34.2 0.9 6924268 chr3R 21907536 intergenic CG6678 + chr3R 25369670 intron Fur1 - chr3R 28831804 intron WASp - chr3R_30_25365001 chr3R_25365001 RAL-850 3090 chr3R 21944351 21944400 chr3R 21944477 21944504 18 126 5.0 6.5 5.8 2.6 153 chr3R 21944351 intergenic not near genes chr3R 21944428 intergenic not near genes chr3R 21944504 intergenic not near genes chr3R_18_21940001 chr3R_21940001 RAL-850 3091 chr3R 9893401 9893404 chr3R 22003759 22003762 4 12110358 0.0 20.0 10.0 0.4 12110361 chr3R 9893401 intron Glut4EF + chr3R 15948582 intron Sap47 + chr3R 22003762 intron Eip93F + chr3R_4_15945001 chr3R_15945001 RAL-850 3092 chr3R 22055514 22055587 chr3R 22055753 22055826 26 237 7.5 10.0 8.8 2.7 312 chr3R 22055514 intron how + chr3R 22055670 intron how + chr3R 22055826 intron how + chr3R_26_22055001 chr3R_22055001 RAL-850 3093 chr3R 22108320 22108380 chr3R 22108586 22108662 28 272 10.0 9.5 9.8 2.6 342 chr3R 22108320 intron CG5778 - chr3R 22108491 intron CG5778 - chr3R 22108662 intron CG5778 - chr3R_28_22105001 chr3R_22105001 RAL-850 3094 chr3R 22111099 22111106 chr3R 22111230 22111237 4 131 10.5 20.0 15.2 0.2 138 chr3R 22111099 intergenic not near genes chr3R 22111168 intergenic not near genes chr3R 22111237 intergenic not near genes chr3R_4_22110001 chr3R_22110001 RAL-850 3095 chr3R 22117378 22117444 chr3R 22117504 22117570 20 126 9.0 8.0 8.5 2.1 192 chr3R 22117378 intergenic Ir94b -,Ir94c - chr3R 22117474 intergenic Ir94c -,Ir94b - chr3R 22117570 intergenic Ir94c -,Ir94b - chr3R_20_22115001 chr3R_22115001 RAL-850 3096 chr3R 22234639 22234714 chr3R 22236008 22236083 pogo 34 1368 4.5 6.0 5.2 5.5 1444 chr3R 22234639 intron SKIP + chr3R 22235361 intron SKIP + chr3R 22236083 intron SKIP + chr3R_34_22235001 chr3R_22235001 RAL-850 3097 chr3R 22239453 22239523 chr3R 22248563 22248621 roo 21 9098 5.0 3.0 4.0 4.2 9168 chr3R 22239453 intron SKIP + chr3R 22244037 intron SKIP + chr3R 22248621 intron SKIP + chr3R_21_22240001 chr3R_22240001 RAL-850 3098 chr3R 22283059 22283132 chr3R 22283196 22283264 23 131 7.0 12.5 9.8 2.1 205 chr3R 22283059 intron SKIP + chr3R 22283162 intron SKIP + chr3R 22283264 intron SKIP + chr3R_23_22280001 chr3R_22280001 RAL-850 3099 chr3R 22302304 22302375 chr3R 22302440 22302511 12 136 2.0 10.0 6.0 1.7 207 chr3R 22302304 intron CG7084 + chr3R 22302408 intron CG7084 + chr3R 22302511 intron CG7084 + chr3R_12_22300001 chr3R_22300001 RAL-850 3100 chr3R 22313296 22313374 chr3R 22313426 22313504 19 130 9.0 10.5 9.8 1.8 208 chr3R 22313296 intron CG34377 - chr3R 22313400 intron CG34377 - chr3R 22313504 intron CG34377 - chr3R_19_22310001 chr3R_22310001 RAL-850 3101 chr3R 22318941 22318957 chr3R 22319055 22319081 7 122 17.5 10.5 14.0 0.5 140 chr3R 22318941 5` UTR CG34377 - chr3R 22319011 intron CG34377 - chr3R 22319081 intron CG34377 - chr3R_7_22315001 chr3R_22315001 RAL-850 3102 chr3R 22318960 22318994 chr3R 22319054 22319098 18 120 9.0 9.5 9.2 1.8 138 chr3R 22318960 5` UTR CG34377 - chr3R 22319029 intron CG34377 - chr3R 22319098 intron CG34377 - chr3R_18_22315001 chr3R_22315001 RAL-850 3103 chr3R 22346141 22346212 chr3R 22346277 22346346 19 133 4.5 3.0 3.8 4.0 205 chr3R 22346141 intergenic not near genes chr3R 22346244 intergenic not near genes chr3R 22346346 intergenic not near genes chr3R_19_22345001 chr3R_22345001 RAL-850 3104 chr3R 22349253 22349308 chr3R 22349412 22349467 17 159 0.0 7.0 3.5 3.8 214 chr3R 22349253 intergenic not near genes chr3R 22349360 intergenic not near genes chr3R 22349467 intergenic not near genes chr3R_17_22345001 chr3R_22345001 RAL-850 3105 chr3R 22433055 22433100 chr3R 22433195 22433240 19 143 12.0 9.0 10.5 1.7 185 chr3R 22433055 intron CG13847 - chr3R 22433148 intron CG13847 - chr3R 22433240 intron CG13847 - chr3R_19_22430001 chr3R_22430001 RAL-850 3106 chr3R 22437520 22437588 chr3R 22437672 22437740 31 150 6.5 11.0 8.8 3.2 220 chr3R 22437520 intergenic not near genes chr3R 22437630 intergenic not near genes chr3R 22437740 intergenic not near genes chr3R_31_22435001 chr3R_22435001 RAL-850 3107 chr3R 22450504 22450571 chr3R 22453194 22453256 NOF 30 2685 7.0 9.5 8.2 3.3 2752 chr3R 22450504 intron CG34376 + chr3R 22451880 intron CG34376 + chr3R 22453256 intron CG34376 + chr3R_30_22450001 chr3R_22450001 RAL-850 3108 chr3R 22538396 22538472 chr3R 22538526 22538599 40 133 7.5 9.5 8.5 4.2 203 chr3R 22538396 intron CG5326 - chr3R 22538498 intron CG5326 - chr3R 22538599 intron CG5326 - chr3R_40_22535001 chr3R_22535001 RAL-850 3109 chr3R 22591830 22591871 chr3R 22591973 22592014 11 142 12.0 6.5 9.2 1.1 184 chr3R 22591830 intron Efa6 + chr3R 22591922 intron Efa6 + chr3R 22592014 intron Efa6 + chr3R_11_22590001 chr3R_22590001 RAL-850 3110 chr3R 22661264 22661275 chr3R 22661392 22661409 5 130 16.5 14.0 15.2 0.3 145 chr3R 22661264 intron wake + chr3R 22661336 intron wake + chr3R 22661409 intron wake + chr3R_5_22660001 chr3R_22660001 RAL-850 3111 chr3R 22661277 22661315 chr3R 22661373 22661387 19 121 9.0 11.5 10.2 1.7 110 chr3R 22661277 intron wake + chr3R 22661332 intron wake + chr3R 22661387 intron wake + chr3R_19_22660001 chr3R_22660001 RAL-850 3112 chr3R 22672253 22672330 chr3R 22672396 22672473 24 143 5.0 6.5 5.8 3.5 220 chr3R 22672253 intron wake + chr3R 22672363 intron wake + chr3R 22672473 intron wake + chr3R_24_22670001 chr3R_22670001 RAL-850 3113 chr3R 22687360 22687380 chr3R 22687486 22687507 4 126 11.0 6.5 8.8 0.4 147 chr3R 22687360 3` UTR CG17625 + chr3R 22687434 intergenic CG17625 +,wfs1 - chr3R 22687507 intergenic wfs1 -,CG17625 + chr3R_4_22685001 chr3R_22685001 RAL-850 3114 chr3R 22769057 22769123 chr3R 22769184 22769250 40 125 9.0 19.5 14.2 2.6 193 chr3R 22769057 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769154 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769250 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_40_22765001 chr3R_22765001 RAL-850 3115 chr3R 22794465 22794525 chr3R 22794592 22794652 24 125 13.5 10.0 11.8 1.9 187 chr3R 22794465 intergenic CG7029 + chr3R 22794558 intergenic not near genes chr3R 22794652 intergenic not near genes chr3R_24_22790001 chr3R_22790001 RAL-850 3116 chr3R 22797727 22797745 chr3R 22797861 22797871 5 133 12.0 0.0 6.0 0.7 144 chr3R 22797727 intergenic not near genes chr3R 22797799 intergenic not near genes chr3R 22797871 intergenic not near genes chr3R_5_22795001 chr3R_22795001 RAL-850 3117 chr3R 22797748 22797936 chr3R 22797854 22798079 26 137 0.0 0.0 0.0 26.0 331 chr3R 22797748 intergenic not near genes chr3R 22797914 intergenic not near genes chr3R 22798079 intergenic not near genes chr3R_26_22795001 chr3R_22795001 RAL-850 3118 chr3R 22833629 22833635 chr3R 22833764 22833775 4 139 0.0 21.5 10.8 0.3 146 chr3R 22833629 intergenic not near genes chr3R 22833702 intergenic not near genes chr3R 22833775 intergenic not near genes chr3R_4_22830001 chr3R_22830001 RAL-850 3119 chr3R 22833637 22833639 chr3R 22833757 22833779 4 134 0.0 19.5 9.8 0.4 142 chr3R 22833637 intergenic not near genes chr3R 22833708 intergenic not near genes chr3R 22833779 intergenic not near genes chr3R_4_22830001 chr3R_22830001 RAL-850 3120 chr3R 22840414 22840462 chr3R 22840535 22840590 19 122 8.5 15.5 12.0 1.5 176 chr3R 22840414 intergenic not near genes chr3R 22840502 intergenic not near genes chr3R 22840590 intergenic not near genes chr3R_19_22840001 chr3R_22840001 RAL-850 3121 chr3R 22846441 22846493 chr3R 22846578 22846630 14 137 9.5 11.0 10.2 1.2 189 chr3R 22846441 intergenic CG4704 - chr3R 22846536 intergenic CG4704 - chr3R 22846630 intergenic CG4704 - chr3R_14_22845001 chr3R_22845001 RAL-850 3122 chr3R 22850525 22850591 chr3R 22850689 22850751 24 161 3.5 9.0 6.2 3.3 226 chr3R 22850525 intergenic not near genes chr3R 22850638 intergenic CR43846 - chr3R 22850751 intergenic CR43846 - chr3R_24_22850001 chr3R_22850001 RAL-850 3123 chr3R 22880558 22880581 chr3R 22880684 22880708 12 126 23.0 14.0 18.5 0.6 150 chr3R 22880558 intergenic not near genes chr3R 22880633 intergenic not near genes chr3R 22880708 intergenic not near genes chr3R_12_22880001 chr3R_22880001 RAL-850 3124 chr3R 22880587 22880614 chr3R 22880678 22880741 13 122 14.5 15.5 15.0 0.8 154 chr3R 22880587 intergenic not near genes chr3R 22880664 intergenic not near genes chr3R 22880741 intergenic not near genes chr3R_13_22880001 chr3R_22880001 RAL-850 3125 chr3R 22880884 22880948 chr3R 22881072 22881136 18 188 13.5 6.0 9.8 1.7 252 chr3R 22880884 intergenic not near genes chr3R 22881010 intergenic not near genes chr3R 22881136 intergenic not near genes chr3R_18_22880001 chr3R_22880001 RAL-850 3126 chr3R 22881190 22881228 chr3R 22884945 22884983 Doc 12 3754 5.0 9.5 7.2 1.5 3793 chr3R 22881190 intergenic not near genes chr3R 22883086 intergenic not near genes chr3R 22884983 intergenic not near genes chr3R_12_22880001 chr3R_22880001 RAL-850 3127 chr3R 22943976 22944010 chr3R 22944382 22944416 12 405 0.0 17.0 8.5 1.3 440 chr3R 22943976 intron klg + chr3R 22944196 intron klg + chr3R 22944416 intron klg + chr3R_12_22940001 chr3R_22940001 RAL-850 3128 chr3R 23060255 23060256 chr3R 23060333 23060396 4 124 0.0 7.0 3.5 0.9 141 chr3R 23060255 intron sav - chr3R 23060326 intron sav - chr3R 23060396 exon sav - chr3R_4_23060001 chr3R_23060001 RAL-850 3129 chr3R 23082913 23082975 chr3R 23083162 23083163 39 239 11.0 16.5 13.8 2.6 250 chr3R 23082913 intron CG13830 - chr3R 23083038 intron CG13830 - chr3R 23083163 intron CG13830 - chr3R_39_23080001 chr3R_23080001 RAL-850 3130 chr3R 23101336 23101401 chr3R 23101478 23101522 27 135 7.5 10.5 9.0 2.7 186 chr3R 23101336 intron CG13830 - chr3R 23101429 intron CG13830 - chr3R 23101522 intron CG13830 - chr3R_27_23100001 chr3R_23100001 RAL-850 3131 chr3R 23114125 23114190 chr3R 23114253 23114318 46 127 11.0 11.5 11.2 3.8 193 chr3R 23114125 3` UTR Rassf - chr3R 23114222 3` UTR Rassf - chr3R 23114318 3` UTR Rassf - chr3R_46_23110001 chr3R_23110001 RAL-850 3132 chr3R 23182634 23182706 chr3R 23182767 23182839 17 133 3.0 4.5 3.8 3.5 205 chr3R 23182634 intron Irk1 + chr3R 23182736 intron Irk1 + chr3R 23182839 intron Irk1 + chr3R_17_23180001 chr3R_23180001 RAL-850 3133 chr3R 23217455 23217524 chr3R 23217762 23217837 28 313 57.0 62.5 59.8 0.5 382 chr3R 23217455 intron cnc - chr3R 23217646 intron cnc - chr3R 23217837 intron cnc - chr3R_28_23215001 chr3R_23215001 RAL-850 3134 chr3R 23245935 23246000 chr3R 23246074 23246139 21 137 6.5 5.0 5.8 3.1 204 chr3R 23245935 intron CG4467 - chr3R 23246037 intron CG4467 - chr3R 23246139 intron CG4467 - chr3R_21_23245001 chr3R_23245001 RAL-850 3135 chr3R 23260907 23260915 chr3R 23261039 23261047 4 132 22.5 6.5 14.5 0.3 140 chr3R 23260907 3` UTR orb - chr3R 23260977 3` UTR orb - chr3R 23261047 3` UTR orb - chr3R_4_23260001 chr3R_23260001 RAL-850 3136 chr3R 23260917 23260986 chr3R 23261035 23261119 21 131 9.5 6.5 8.0 2.3 202 chr3R 23260917 3` UTR orb - chr3R 23261018 3` UTR orb - chr3R 23261119 3` UTR orb - chr3R_21_23260001 chr3R_23260001 RAL-850 3137 chr3R 23317386 23317452 chr3R 23317520 23317586 34 134 7.5 8.0 7.8 3.9 200 chr3R 23317386 intron pnt - chr3R 23317486 intron pnt - chr3R 23317586 intron pnt - chr3R_34_23315001 chr3R_23315001 RAL-850 3138 chr3R 23319656 23319673 chr3R 23319784 23319801 13 128 0.0 12.5 6.2 1.8 145 chr3R 23319656 intron pnt - chr3R 23319728 intron pnt - chr3R 23319801 intron pnt - chr3R_13_23315001 chr3R_23315001 RAL-850 3139 chr3R 23356973 23357014 chr3R 23357109 23357150 9 135 7.0 1.0 4.0 1.8 177 chr3R 23356973 intron Sec13 + chr3R 23357062 intron Sec13 + chr3R 23357150 intron Sec13 + chr3R_9_23355001 chr3R_23355001 RAL-850 3140 chr3R 23390915 23390956 chr3R 23391047 23391085 9 131 2.5 3.5 3.0 2.2 170 chr3R 23390915 intergenic CR43387 + chr3R 23391000 intergenic CR43387 + chr3R 23391085 intergenic not near genes chr3R_9_23390001 chr3R_23390001 RAL-850 3141 chr3R 23421932 23422009 chr3R 23422067 23422142 32 131 9.0 8.5 8.8 3.3 210 chr3R 23421932 intron CG4374 - chr3R 23422037 intron CG4374 - chr3R 23422142 intron CG4374 - chr3R_32_23420001 chr3R_23420001 RAL-850 3142 chr3R 23558351 23558414 chr3R 23560182 23560239 Bari1 21 1830 8.0 3.0 5.5 3.2 1888 chr3R 23558351 intron beat-IV + chr3R 23559295 intron beat-IV + chr3R 23560239 intron beat-IV + chr3R_21_23555001 chr3R_23555001 RAL-850 3143 chr3R 23562118 23562188 chr3R 23562244 23562319 23 122 7.0 12.0 9.5 2.2 201 chr3R 23562118 intron beat-IV + chr3R 23562218 intron beat-IV + chr3R 23562319 intron beat-IV + chr3R_23_23560001 chr3R_23560001 RAL-850 3144 chr3R 23627501 23627505 chr3R 23627628 23627632 4 127 16.5 0.0 8.2 0.4 131 chr3R 23627501 intron CG31145 - chr3R 23627566 intron CG31145 - chr3R 23627632 intron CG31145 - chr3R_4_23625001 chr3R_23625001 RAL-850 3145 chr3R 23627512 23627637 chr3R 23627628 23627761 25 137 1.0 0.0 0.5 16.7 249 chr3R 23627512 intron CG31145 - chr3R 23627636 intron CG31145 - chr3R 23627761 intron CG31145 - chr3R_25_23625001 chr3R_23625001 RAL-850 3146 chr3R 23629784 23629850 chr3R 23629903 23629939 37 122 9.5 8.0 8.8 3.8 155 chr3R 23629784 intron CG31145 - chr3R 23629862 intron CG31145 - chr3R 23629939 intron CG31145 - chr3R_37_23625001 chr3R_23625001 RAL-850 3147 chr3R 23643923 23643950 chr3R 23644053 23644080 8 130 13.0 9.5 11.2 0.7 157 chr3R 23643923 intron CG31145 - chr3R 23644002 intron CG31145 - chr3R 23644080 intron CG31145 - chr3R_8_23640001 chr3R_23640001 RAL-850 3148 chr3R 23652915 23652988 chr3R 23653070 23653123 30 153 9.0 13.0 11.0 2.5 208 chr3R 23652915 intron CG31145 - chr3R 23653019 intron CG31145 - chr3R 23653123 intron CG31145 - chr3R_30_23650001 chr3R_23650001 RAL-850 3149 chr3R 23670498 23670561 chr3R 23670762 23670764 32 261 5.5 6.0 5.8 4.7 266 chr3R 23670498 intergenic not near genes chr3R 23670631 intergenic not near genes chr3R 23670764 intergenic not near genes chr3R_32_23670001 chr3R_23670001 RAL-850 3150 chr3R 23677149 23677189 chr3R 23677282 23677321 10 132 10.0 11.0 10.5 0.9 172 chr3R 23677149 intergenic CG13822 + chr3R 23677235 intergenic CG13822 + chr3R 23677321 intergenic CG13822 + chr3R_10_23675001 chr3R_23675001 RAL-850 3151 chr3R 23684650 23684662 chr3R 23685186 23685198 roo 4 536 22.5 10.0 16.2 0.2 548 chr3R 23684650 exon CG18754 + chr3R 23684924 intron CG18754 + chr3R 23685198 exon CG18754 + chr3R_4_23680001 chr3R_23680001 RAL-850 3152 chr3R 23684663 23684727 chr3R 23685184 23685258 roo 26 527 7.0 10.0 8.5 2.7 595 chr3R 23684663 exon CG18754 + chr3R 23684960 intron CG18754 + chr3R 23685258 exon CG18754 + chr3R_26_23680001 chr3R_23680001 RAL-850 3153 chr3R 23725428 23725485 chr3R 23725559 23725616 18 131 5.0 14.5 9.8 1.7 188 chr3R 23725428 intron CG10365 + chr3R 23725522 intron CG10365 + chr3R 23725616 intron CG10365 + chr3R_18_23725001 chr3R_23725001 RAL-850 3154 chr3R 23809776 23809867 chr3R 23809915 23809994 18 128 1.5 8.5 5.0 3.0 218 chr3R 23809776 intron,intron,3` UTR CG33111 -,CG34355 +,eIF4G2 - chr3R 23809885 intron,intron,3` UTR CG33111 -,CG34355 +,eIF4G2 - chr3R 23809994 intron,intron,3` UTR CG33111 -,CG34355 +,eIF4G2 - chr3R_18_23805001 chr3R_23805001 RAL-850 3155 chr3R 23835364 23835432 chr3R 23844564 23844630 roo 13 9199 12.5 0.0 6.2 1.8 9266 chr3R 23835364 intron CG34355 + chr3R 23839997 intron CG34355 + chr3R 23844630 intron CG34355 + chr3R_13_23835001 chr3R_23835001 RAL-850 3156 chr3R 23851037 23851081 chr3R 23858754 23858798 opus 14 7717 11.0 12.0 11.5 1.1 7761 chr3R 23851037 3` UTR CG34355 + chr3R 23854918 intergenic not near genes chr3R 23858798 intergenic not near genes chr3R_14_23850001 chr3R_23850001 RAL-850 3157 chr3R 23873942 23873969 chr3R 23874064 23874072 13 112 21.0 23.0 22.0 0.6 130 chr3R 23873942 intron Pli - chr3R 23874007 intron Pli - chr3R 23874072 intron Pli - chr3R_13_23870001 chr3R_23870001 RAL-850 3158 chr3R 23888042 23888105 chr3R 23888178 23888241 32 136 9.5 8.5 9.0 3.2 199 chr3R 23888042 intron Pli - chr3R 23888142 intron Pli - chr3R 23888241 intron Pli - chr3R_32_23885001 chr3R_23885001 RAL-850 3159 chr3R 23893734 23893805 chr3R 23893887 23893959 30 146 17.0 10.5 13.8 2.0 225 chr3R 23893734 intergenic tbrd-1 -,sba - chr3R 23893846 intergenic sba -,tbrd-1 - chr3R 23893959 intergenic sba - chr3R_30_23890001 chr3R_23890001 RAL-850 3160 chr3R 23944860 23944918 chr3R 23944995 23945043 24 134 17.0 9.5 13.2 1.7 183 chr3R 23944860 intron CG12268 - chr3R 23944952 intron CG12268 - chr3R 23945043 exon CG12268 - chr3R_24_23940001 chr3R_23940001 RAL-850 3161 chr3R 24011618 24011680 chr3R 24011751 24011813 13 133 4.0 0.5 2.2 4.1 195 chr3R 24011618 intron KrT95D - chr3R 24011716 intron KrT95D - chr3R 24011813 intron KrT95D - chr3R_13_24010001 chr3R_24010001 RAL-850 3162 chr3R 24023330 24023358 chr3R 24023459 24023462 5 124 13.0 0.0 6.5 0.7 132 chr3R 24023330 intron KrT95D - chr3R 24023396 intron KrT95D - chr3R 24023462 intron KrT95D - chr3R_5_24020001 chr3R_24020001 RAL-850 3163 chr3R 24024947 24025001 chr3R 24025083 24025143 30 137 6.0 11.0 8.5 3.2 196 chr3R 24024947 intron KrT95D - chr3R 24025045 intron KrT95D - chr3R 24025143 intron KrT95D - chr3R_30_24025001 chr3R_24025001 RAL-850 3164 chr3R 24072045 24072104 chr3R 24072533 24072576 jockey 27 484 20.0 15.5 17.8 1.4 531 chr3R 24072045 intron 4EHP - chr3R 24072310 intron 4EHP - chr3R 24072576 intron 4EHP - chr3R_27_24070001 chr3R_24070001 RAL-850 3165 chr3R 24076881 24076914 chr3R 24078398 24078431 hobo 14 1516 7.5 13.0 10.2 1.2 1550 chr3R 24076881 intron 4EHP - chr3R 24077656 intron 4EHP - chr3R 24078431 intron 4EHP - chr3R_14_24075001 chr3R_24075001 RAL-850 3166 chr3R 24076916 24076941 chr3R 24078389 24078458 hobo 15 1513 6.0 11.0 8.5 1.6 1542 chr3R 24076916 intron 4EHP - chr3R 24077687 intron 4EHP - chr3R 24078458 intron 4EHP - chr3R_15_24075001 chr3R_24075001 RAL-850 3167 chr3R 24207175 24207240 chr3R 24212296 24212367 flea 24 5124 12.5 11.0 11.8 1.9 5192 chr3R 24207175 intron twin - chr3R 24209771 intron twin - chr3R 24212367 intron twin - chr3R_24_24205001 chr3R_24205001 RAL-850 3168 chr3R 24303972 24304034 chr3R 24304102 24304164 18 130 8.0 7.0 7.5 2.1 192 chr3R 24303972 intron crb + chr3R 24304068 intron crb + chr3R 24304164 intron crb + chr3R_18_24300001 chr3R_24300001 RAL-850 3169 chr3R 21907535 21907535 chr3R 24389465 24389465 5 2481930 37.5 30.0 33.8 0.1 2481930 chr3R 21907535 intergenic CG6678 + chr3R 23148500 intergenic not near genes chr3R 24389465 intron CG5768 - chr3R_5_23145001 chr3R_23145001 RAL-850 3170 chr3R 24431550 24431620 chr3R 24431679 24431749 21 127 9.0 0.5 4.8 3.6 199 chr3R 24431550 intron nAChRalpha1 - chr3R 24431650 intron nAChRalpha1 - chr3R 24431749 intron nAChRalpha1 - chr3R_21_24430001 chr3R_24430001 RAL-850 3171 chr3R 24434194 24434267 chr3R 24434322 24434395 21 127 10.5 6.5 8.5 2.2 201 chr3R 24434194 intron nAChRalpha1 - chr3R 24434294 intron nAChRalpha1 - chr3R 24434395 intron nAChRalpha1 - chr3R_21_24430001 chr3R_24430001 RAL-850 3172 chr3R 24447674 24447756 chr3R 24447811 24447893 8 136 5.5 7.0 6.2 1.1 219 chr3R 24447674 intron nAChRalpha1 - chr3R 24447784 intron nAChRalpha1 - chr3R 24447893 intron nAChRalpha1 - chr3R_8_24445001 chr3R_24445001 RAL-850 3173 chr3R 24482874 24482890 chr3R 24483012 24483028 4 136 22.0 14.0 18.0 0.2 154 chr3R 24482874 intergenic not near genes chr3R 24482951 intergenic not near genes chr3R 24483028 intergenic not near genes chr3R_4_24480001 chr3R_24480001 RAL-850 3174 chr3R 24482895 24482929 chr3R 24483011 24483052 15 124 13.5 14.0 13.8 1.0 157 chr3R 24482895 intergenic not near genes chr3R 24482974 intergenic not near genes chr3R 24483052 intergenic not near genes chr3R_15_24480001 chr3R_24480001 RAL-850 3175 chr3R 24493237 24493302 chr3R 24493516 24493581 BS 40 279 10.5 6.0 8.2 4.3 344 chr3R 24493237 intergenic not near genes chr3R 24493409 intergenic not near genes chr3R 24493581 intergenic not near genes chr3R_40_24490001 chr3R_24490001 RAL-850 3176 chr3R 24523851 24523925 chr3R 24523987 24524061 21 136 5.5 2.0 3.8 4.4 210 chr3R 24523851 intergenic CG13622 - chr3R 24523956 intergenic CG13622 - chr3R 24524061 intergenic CG13622 - chr3R_21_24520001 chr3R_24520001 RAL-850 3177 chr3R 24527761 24527826 chr3R 24527902 24527967 14 140 8.5 3.0 5.8 2.1 206 chr3R 24527761 intergenic CG13618 +,CG6607 + chr3R 24527864 intergenic CG6607 +,CG13618 + chr3R 24527967 intergenic CG6607 +,CG13618 + chr3R_14_24525001 chr3R_24525001 RAL-850 3178 chr3R 24550687 24550738 chr3R 24551157 24551208 19 470 5.5 6.0 5.8 2.8 521 chr3R 24550687 intron Esyt2 + chr3R 24550948 intron Esyt2 + chr3R 24551208 intron Esyt2 + chr3R_19_24550001 chr3R_24550001 RAL-850 3179 chr3R 24594628 24594662 chr3R 24594918 24594952 pogo 12 290 17.0 20.0 18.5 0.6 324 chr3R 24594628 intron mld + chr3R 24594790 intron mld + chr3R 24594952 intron mld + chr3R_12_24590001 chr3R_24590001 RAL-850 3180 chr3R 24605512 24605557 chr3R 24605650 24605676 21 138 11.0 20.0 15.5 1.3 164 chr3R 24605512 intron mld + chr3R 24605594 intron mld + chr3R 24605676 intron mld + chr3R_21_24605001 chr3R_24605001 RAL-850 3181 chr3R 24667555 24667595 chr3R 24667682 24667722 8 127 11.0 0.0 5.5 1.2 167 chr3R 24667555 intron slo + chr3R 24667638 intron slo + chr3R 24667722 intron slo + chr3R_8_24665001 chr3R_24665001 RAL-850 3182 chr3R 24670127 24670198 chr3R 24670261 24670332 25 134 8.5 9.0 8.8 2.6 205 chr3R 24670127 intron slo + chr3R 24670230 intron slo + chr3R 24670332 intron slo + chr3R_25_24670001 chr3R_24670001 RAL-850 3183 chr3R 24671189 24671254 chr3R 24671310 24671375 24 119 6.5 9.0 7.8 2.7 186 chr3R 24671189 intron slo + chr3R 24671282 intron slo + chr3R 24671375 intron slo + chr3R_24_24670001 chr3R_24670001 RAL-850 3184 chr3R 24710378 24710391 chr3R 24710511 24710530 14 139 20.5 11.0 15.8 0.8 152 chr3R 24710378 3` UTR slo + chr3R 24710454 3` UTR slo + chr3R 24710530 3` UTR slo + chr3R_14_24710001 chr3R_24710001 RAL-850 3185 chr3R 24710394 24710437 chr3R 24710533 24710576 17 139 11.0 15.5 13.2 1.2 182 chr3R 24710394 3` UTR slo + chr3R 24710485 3` UTR slo + chr3R 24710576 3` UTR slo + chr3R_17_24710001 chr3R_24710001 RAL-850 3186 chr3R 24730058 24730087 chr3R 24732485 24732501 Doc 6 2423 15.5 3.5 9.5 0.6 2443 chr3R 24730058 intron tok + chr3R 24731280 intron tok + chr3R 24732501 intron tok + chr3R_6_24730001 chr3R_24730001 RAL-850 3187 chr3R 24741032 24741112 chr3R 24741192 24741246 22 156 5.5 6.5 6.0 3.1 214 chr3R 24741032 intron tok + chr3R 24741139 intron tok + chr3R 24741246 intron tok + chr3R_22_24740001 chr3R_24740001 RAL-850 3188 chr3R 24789936 24790011 chr3R 24790131 24790206 19 192 6.0 10.0 8.0 2.1 270 chr3R 24789936 intron,5` UTR Ets96B +,CG13634 - chr3R 24790071 intron,5` UTR Ets96B +,CG13634 - chr3R 24790206 intron Ets96B + chr3R_19_24790001 chr3R_24790001 RAL-850 3189 chr3R 24854837 24854911 chr3R 24854969 24855043 19 132 5.5 5.5 5.5 2.9 206 chr3R 24854837 3` UTR,3` UTR nct +,HdacX - chr3R 24854940 3` UTR HdacX - chr3R 24855043 3` UTR HdacX - chr3R_19_24850001 chr3R_24850001 RAL-850 3190 chr3R 24927086 24927146 chr3R 24931927 24931982 Doc 22 4839 8.5 10.0 9.2 2.2 4896 chr3R 24927086 intergenic Trf4-2 + chr3R 24929534 intergenic not near genes chr3R 24931982 intergenic CG11771 + chr3R_22_24925001 chr3R_24925001 RAL-850 3191 chr3R 24974862 24974928 chr3R 24974991 24975027 29 126 12.5 12.0 12.2 2.2 165 chr3R 24974862 intergenic not near genes chr3R 24974944 intergenic not near genes chr3R 24975027 intergenic not near genes chr3R_29_24970001 chr3R_24970001 RAL-850 3192 chr3R 25004849 25004920 chr3R 25004982 25005053 19 132 8.0 8.0 8.0 2.1 204 chr3R 25004849 intron tnc + chr3R 25004951 intron tnc + chr3R 25005053 intron tnc + chr3R_19_25000001 chr3R_25000001 RAL-850 3193 chr3R 25027497 25027564 chr3R 25027760 25027827 24 263 13.5 9.0 11.2 2.0 330 chr3R 25027497 intron Hr96 + chr3R 25027662 intron Hr96 + chr3R 25027827 intron Hr96 + chr3R_24_25025001 chr3R_25025001 RAL-850 3194 chr3R 25136358 25136416 chr3R 25136488 25136546 23 130 10.0 6.0 8.0 2.6 188 chr3R 25136358 3` UTR Bili + chr3R 25136452 3` UTR Bili + chr3R 25136546 3` UTR Bili + chr3R_23_25135001 chr3R_25135001 RAL-850 3195 chr3R 25166154 25166365 chr3R 25166281 25166491 27 128 0.0 0.0 0.0 27.0 337 chr3R 25166154 intergenic not near genes chr3R 25166322 intergenic not near genes chr3R 25166491 intergenic not near genes chr3R_27_25165001 chr3R_25165001 RAL-850 3196 chr3R 25207598 25207599 chr3R 25207740 25207742 4 143 11.0 4.0 7.5 0.5 144 chr3R 25207598 intron,intron Cad96Ca -,CG13654 + chr3R 25207670 intron,intron Cad96Ca -,CG13654 + chr3R 25207742 intron,intron Cad96Ca -,CG13654 + chr3R_4_25205001 chr3R_25205001 RAL-850 3197 chr3R 25207600 25207624 chr3R 25207738 25207767 14 143 6.5 4.0 5.2 2.3 167 chr3R 25207600 intron,intron Cad96Ca -,CG13654 + chr3R 25207684 intron,intron Cad96Ca -,CG13654 + chr3R 25207767 intron,intron Cad96Ca -,CG13654 + chr3R_14_25205001 chr3R_25205001 RAL-850 3198 chr3R 25268111 25268116 chr3R 25272650 25272655 5 4539 36.5 38.0 37.2 0.1 4544 chr3R 25268111 3` UTR CR45214 - chr3R 25270383 exon,5` UTR CG11889 +,CG11891 + chr3R 25272655 3` UTR,exon CG11889 +,CG11891 + chr3R_5_25270001 chr3R_25270001 RAL-850 3199 chr3R 25300624 25300698 chr3R 25300790 25300864 32 165 5.5 5.5 5.5 4.9 240 chr3R 25300624 intergenic CG13659 + chr3R 25300744 intergenic CG13659 + chr3R 25300864 intergenic CG13659 + chr3R_32_25300001 chr3R_25300001 RAL-850 3200 chr3R 25301095 25301164 chr3R 25301545 25301614 29 447 10.5 10.5 10.5 2.5 519 chr3R 25301095 exon CG13659 + chr3R 25301354 exon CG13659 + chr3R 25301614 exon CG13659 + chr3R_29_25300001 chr3R_25300001 RAL-850 3201 chr3R 25317743 25317818 chr3R 25317873 25317948 19 128 10.0 10.5 10.2 1.7 205 chr3R 25317743 exon CG10553 - chr3R 25317846 intron CG10553 - chr3R 25317948 exon CG10553 - chr3R_19_25315001 chr3R_25315001 RAL-850 3202 chr3R 25324340 25324388 chr3R 25328955 25329003 Doc 28 4614 9.5 18.0 13.8 1.9 4663 chr3R 25324340 exon CHKov1 - chr3R 25326672 intron CHKov1 - chr3R 25329003 intron CHKov1 - chr3R_28_25325001 chr3R_25325001 RAL-850 3203 chr3R 25334409 25334413 chr3R 25334559 25334588 5 166 16.0 9.0 12.5 0.4 179 chr3R 25334409 intron CG10669 - chr3R 25334498 exon CG10669 - chr3R 25334588 exon CG10669 - chr3R_5_25330001 chr3R_25330001 RAL-850 3204 chr3R 25334414 25334457 chr3R 25334554 25334609 28 163 7.0 7.5 7.2 3.4 195 chr3R 25334414 intron CG10669 - chr3R 25334512 exon CG10669 - chr3R 25334609 exon CG10669 - chr3R_28_25330001 chr3R_25330001 RAL-850 3205 chr3R 25368427 25368505 chr3R 25368595 25368666 29 170 7.5 0.0 3.8 6.0 239 chr3R 25368427 intron Fur1 - chr3R 25368546 intron Fur1 - chr3R 25368666 intron Fur1 - chr3R_29_25365001 chr3R_25365001 RAL-850 3206 chr3R 25369839 25369895 chr3R 25369958 25370029 16 133 6.5 6.5 6.5 2.1 190 chr3R 25369839 intron Fur1 - chr3R 25369934 intron Fur1 - chr3R 25370029 intron Fur1 - chr3R_16_25365001 chr3R_25365001 RAL-850 3207 chr3R 25374800 25374830 chr3R 25374928 25374958 7 127 18.0 1.5 9.8 0.6 158 chr3R 25374800 intron Fur1 - chr3R 25374879 intron Fur1 - chr3R 25374958 intron Fur1 - chr3R_7_25370001 chr3R_25370001 RAL-850 3208 chr3R 25374831 25374871 chr3R 25374922 25374999 20 126 9.0 1.5 5.2 3.2 168 chr3R 25374831 intron Fur1 - chr3R 25374915 intron Fur1 - chr3R 25374999 intron Fur1 - chr3R_20_25370001 chr3R_25370001 RAL-850 3209 chr3R 25405347 25405396 chr3R 25405474 25405505 20 122 17.5 16.5 17.0 1.1 158 chr3R 25405347 intron Fur1 - chr3R 25405426 intron Fur1 - chr3R 25405505 intron Fur1 - chr3R_20_25405001 chr3R_25405001 RAL-850 3210 chr3R 25419003 25419031 chr3R 25419137 25419165 9 132 10.0 0.0 5.0 1.5 162 chr3R 25419003 intron Fur1 - chr3R 25419084 intron Fur1 - chr3R 25419165 intron Fur1 - chr3R_9_25415001 chr3R_25415001 RAL-850 3211 chr3R 25425566 25425583 chr3R 25425733 25425752 4 168 3.5 11.5 7.5 0.5 186 chr3R 25425566 intron Fur1 - chr3R 25425659 intron Fur1 - chr3R 25425752 intron Fur1 - chr3R_4_25425001 chr3R_25425001 RAL-850 3212 chr3R 25425979 25426064 chr3R 25426106 25426154 23 120 10.5 8.5 9.5 2.2 175 chr3R 25425979 intron Fur1 - chr3R 25426066 intron Fur1 - chr3R 25426154 intron Fur1 - chr3R_23_25425001 chr3R_25425001 RAL-850 3213 chr3R 25440754 25440985 chr3R 25440885 25441112 8 130 2.0 0.0 1.0 4.0 358 chr3R 25440754 intron Fur1 - chr3R 25440933 intron Fur1 - chr3R 25441112 intron Fur1 - chr3R_8_25440001 chr3R_25440001 RAL-850 3214 chr3R 25454863 25454922 chr3R 25455003 25455062 25 140 5.0 15.0 10.0 2.3 199 chr3R 25454863 intron Fur1 - chr3R 25454962 intron Fur1 - chr3R 25455062 intron Fur1 - chr3R_25_25450001 chr3R_25450001 RAL-850 3215 chr3R 25513026 25513034 chr3R 25513159 25513167 4 133 0.5 18.5 9.5 0.4 141 chr3R 25513026 intergenic not near genes chr3R 25513096 intergenic not near genes chr3R 25513167 intergenic not near genes chr3R_4_25510001 chr3R_25510001 RAL-850 3216 chr3R 25514408 25514423 chr3R 25514534 25514554 7 130 0.0 12.0 6.0 1.0 146 chr3R 25514408 intergenic not near genes chr3R 25514481 intergenic not near genes chr3R 25514554 intergenic not near genes chr3R_7_25510001 chr3R_25510001 RAL-850 3217 chr3R 25520946 25520981 chr3R 25521095 25521130 14 148 13.5 4.0 8.8 1.4 184 chr3R 25520946 intron msi + chr3R 25521038 intron msi + chr3R 25521130 intron msi + chr3R_14_25520001 chr3R_25520001 RAL-850 3218 chr3R 25527995 25528037 chr3R 25528148 25528190 20 152 14.0 12.5 13.2 1.4 195 chr3R 25527995 intron msi + chr3R 25528092 intron msi + chr3R 25528190 intron msi + chr3R_20_25525001 chr3R_25525001 RAL-850 3219 chr3R 25571844 25571872 chr3R 25571982 25572010 13 138 8.0 11.0 9.5 1.2 166 chr3R 25571844 intron msi + chr3R 25571927 intron msi + chr3R 25572010 intron msi + chr3R_13_25570001 chr3R_25570001 RAL-850 3220 chr3R 25652274 25652294 chr3R 25652401 25652421 9 125 19.5 10.5 15.0 0.6 147 chr3R 25652274 intergenic not near genes chr3R 25652348 intergenic not near genes chr3R 25652421 intergenic not near genes chr3R_9_25650001 chr3R_25650001 RAL-850 3221 chr3R 25652297 25652342 chr3R 25652399 25652469 24 124 11.5 10.0 10.8 2.0 172 chr3R 25652297 intergenic not near genes chr3R 25652383 intergenic not near genes chr3R 25652469 intergenic not near genes chr3R_24_25650001 chr3R_25650001 RAL-850 3222 chr3R 25671194 25671274 chr3R 25671341 25671417 27 148 8.5 5.5 7.0 3.4 223 chr3R 25671194 intron Lgr3 + chr3R 25671306 intron Lgr3 + chr3R 25671417 intron Lgr3 + chr3R_27_25670001 chr3R_25670001 RAL-850 3223 chr3R 25701855 25701927 chr3R 25702045 25702094 31 192 4.5 6.5 5.5 4.8 239 chr3R 25701855 intron LpR2 - chr3R 25701974 intron LpR2 - chr3R 25702094 intron LpR2 - chr3R_31_25700001 chr3R_25700001 RAL-850 3224 chr3R 25725789 25725851 chr3R 25734999 25735061 roo 21 9210 8.0 8.0 8.0 2.3 9272 chr3R 25725789 intron LpR2 - chr3R 25730425 intron LpR2 - chr3R 25735061 intron LpR2 - chr3R_21_25730001 chr3R_25730001 RAL-850 3225 chr3R 25765839 25765910 chr3R 25765960 25765994 31 121 11.5 14.0 12.8 2.2 155 chr3R 25765839 intergenic not near genes chr3R 25765916 intergenic not near genes chr3R 25765994 intergenic not near genes chr3R_31_25765001 chr3R_25765001 RAL-850 3226 chr3R 25781332 25781401 chr3R 25781496 25781565 16 161 3.0 5.5 4.2 3.1 233 chr3R 25781332 intergenic not near genes chr3R 25781448 intergenic not near genes chr3R 25781565 intergenic not near genes chr3R_16_25780001 chr3R_25780001 RAL-850 3227 chr3R 25789819 25789829 chr3R 25789956 25789966 6 137 16.5 11.0 13.8 0.4 147 chr3R 25789819 3` UTR CG31093 - chr3R 25789892 3` UTR CG31093 - chr3R 25789966 exon CG31093 - chr3R_6_25785001 chr3R_25785001 RAL-850 3228 chr3R 25789833 25789884 chr3R 25789955 25789970 13 122 10.0 10.5 10.2 1.2 137 chr3R 25789833 3` UTR CG31093 - chr3R 25789902 3` UTR CG31093 - chr3R 25789970 exon CG31093 - chr3R_13_25785001 chr3R_25785001 RAL-850 3229 chr3R 25832657 25832687 chr3R 25841889 25841909 roo 12 9231 13.0 11.5 12.2 0.9 9252 chr3R 25832657 exon alpha4GT2 + chr3R 25837283 intron alpha4GT2 + chr3R 25841909 exon alpha4GT2 + chr3R_12_25835001 chr3R_25835001 RAL-850 3230 chr3R 25832693 25832722 chr3R 25841874 25841924 roo 14 9224 7.0 9.0 8.0 1.6 9231 chr3R 25832693 exon alpha4GT2 + chr3R 25837308 intron alpha4GT2 + chr3R 25841924 exon alpha4GT2 + chr3R_14_25835001 chr3R_25835001 RAL-850 3231 chr3R 25843595 25843663 chr3R 25843775 25843843 21 180 6.5 8.5 7.5 2.5 248 chr3R 25843595 intergenic CR45653 + chr3R 25843719 intergenic CR45653 + chr3R 25843843 intergenic CR45653 + chr3R_21_25840001 chr3R_25840001 RAL-850 3232 chr3R 25846093 25846166 chr3R 25846240 25846313 23 145 10.5 9.5 10.0 2.1 220 chr3R 25846093 5` UTR CR45654 + chr3R 25846203 5` UTR CR45654 + chr3R 25846313 5` UTR CR45654 + chr3R_23_25845001 chr3R_25845001 RAL-850 3233 chr3R 25905591 25905645 chr3R 25905744 25905798 19 153 9.5 3.5 6.5 2.5 207 chr3R 25905591 intron CR43259 - chr3R 25905694 intron CR43259 - chr3R 25905798 intron CR43259 - chr3R_19_25905001 chr3R_25905001 RAL-850 3234 chr3R 25913059 25913122 chr3R 25913205 25913268 29 145 12.0 13.0 12.5 2.1 209 chr3R 25913059 intron CG42235 + chr3R 25913164 intron CG42235 + chr3R 25913268 intron CG42235 + chr3R_29_25910001 chr3R_25910001 RAL-850 3235 chr3R 25997202 25997267 chr3R 25997339 25997398 19 136 7.0 9.0 8.0 2.1 196 chr3R 25997202 intergenic CG43116 -,E(spl)mdelta-HLH + chr3R 25997300 intergenic CG43116 -,E(spl)mdelta-HLH + chr3R 25997398 intergenic E(spl)mdelta-HLH +,CG43116 - chr3R_19_25995001 chr3R_25995001 RAL-850 3236 chr3R 26063150 26063199 chr3R 26063294 26063342 20 144 16.0 0.0 8.0 2.2 192 chr3R 26063150 intergenic CG14551 - chr3R 26063246 intergenic CG14551 - chr3R 26063342 intergenic CG14551 - chr3R_20_26060001 chr3R_26060001 RAL-850 3237 chr3R 26108779 26108820 chr3R 26117410 26117421 Tirant 8 8627 10.0 0.5 5.2 1.3 8642 chr3R 26108779 5` UTR CG31324 + chr3R 26113100 intron CG31324 + chr3R 26117421 intron CG31324 + chr3R_8_26110001 chr3R_26110001 RAL-850 3238 chr3R 26121918 26121976 chr3R 26122060 26122088 16 143 6.5 11.5 9.0 1.6 170 chr3R 26121918 intron CG31324 + chr3R 26122003 intron CG31324 + chr3R 26122088 intron CG31324 + chr3R_16_26120001 chr3R_26120001 RAL-850 3239 chr3R 26122418 26122479 chr3R 26122543 26122604 27 123 12.5 13.5 13.0 1.9 186 chr3R 26122418 intron CG31324 + chr3R 26122511 intron CG31324 + chr3R 26122604 intron CG31324 + chr3R_27_26120001 chr3R_26120001 RAL-850 3240 chr3R 26123565 26123601 chr3R 26123820 26123856 9 252 17.5 11.0 14.2 0.6 291 chr3R 26123565 intron CG31324 + chr3R 26123710 intron CG31324 + chr3R 26123856 intron CG31324 + chr3R_9_26120001 chr3R_26120001 RAL-850 3241 chr3R 26123602 26123633 chr3R 26123810 26123858 17 247 9.5 10.0 9.8 1.6 256 chr3R 26123602 intron CG31324 + chr3R 26123730 intron CG31324 + chr3R 26123858 intron CG31324 + chr3R_17_26120001 chr3R_26120001 RAL-850 3242 chr3R 26126502 26126566 chr3R 26126638 26126702 24 136 7.0 8.5 7.8 2.7 200 chr3R 26126502 intron CG31324 + chr3R 26126602 intron CG31324 + chr3R 26126702 intron,5` UTR CG31324 +,CG14556 + chr3R_24_26125001 chr3R_26125001 RAL-850 3243 chr3R 26214924 26214936 chr3R 26215054 26215067 9 131 11.0 17.0 14.0 0.6 143 chr3R 26214924 intergenic not near genes chr3R 26214996 intergenic not near genes chr3R 26215067 intergenic not near genes chr3R_9_26210001 chr3R_26210001 RAL-850 3244 chr3R 26229190 26229224 chr3R 26229315 26229360 9 131 12.0 0.0 6.0 1.3 170 chr3R 26229190 intergenic not near genes chr3R 26229275 intergenic not near genes chr3R 26229360 intergenic not near genes chr3R_9_26225001 chr3R_26225001 RAL-850 3245 chr3R 26229225 26229255 chr3R 26229314 26229383 7 117 6.5 0.0 3.2 1.7 158 chr3R 26229225 intergenic not near genes chr3R 26229304 intergenic not near genes chr3R 26229383 intergenic not near genes chr3R_7_26225001 chr3R_26225001 RAL-850 3246 chr3R 26265773 26265842 chr3R 26265906 26265929 35 135 9.5 12.0 10.8 3.0 156 chr3R 26265773 intron CG6154 + chr3R 26265851 intron CG6154 + chr3R 26265929 intron CG6154 + chr3R_35_26265001 chr3R_26265001 RAL-850 3247 chr3R 26284188 26284254 chr3R 26284346 26284411 18 156 6.0 10.0 8.0 2.0 223 chr3R 26284188 intergenic not near genes chr3R 26284300 intergenic not near genes chr3R 26284411 intergenic not near genes chr3R_18_26280001 chr3R_26280001 RAL-850 3248 chr3R 26287349 26287417 chr3R 26287487 26287555 43 137 14.0 6.0 10.0 3.9 206 chr3R 26287349 intergenic not near genes chr3R 26287452 intergenic not near genes chr3R 26287555 intergenic not near genes chr3R_43_26285001 chr3R_26285001 RAL-850 3249 chr3R 26326645 26326679 chr3R 26326773 26326807 12 128 7.0 9.5 8.2 1.3 162 chr3R 26326645 intron CG33970 + chr3R 26326726 intron CG33970 + chr3R 26326807 intron CG33970 + chr3R_12_26325001 chr3R_26325001 RAL-850 3250 chr3R 26374796 26374856 chr3R 26374948 26375008 27 152 4.5 9.5 7.0 3.4 212 chr3R 26374796 intergenic not near genes chr3R 26374902 intergenic not near genes chr3R 26375008 intergenic not near genes chr3R_27_26370001 chr3R_26370001 RAL-850 3251 chr3R 26376284 26376342 chr3R 26385494 26385552 roo 29 9208 10.0 10.5 10.2 2.6 9268 chr3R 26376284 intergenic not near genes chr3R 26380918 intergenic not near genes chr3R 26385552 intergenic not near genes chr3R_29_26380001 chr3R_26380001 RAL-850 3252 chr3R 26456598 26456652 chr3R 26456726 26456780 16 123 10.5 8.0 9.2 1.6 182 chr3R 26456598 intergenic CG14237 +,Pdf - chr3R 26456689 intergenic CG14237 + chr3R 26456780 intergenic CG14237 + chr3R_16_26455001 chr3R_26455001 RAL-850 3253 chr3R 26456654 26456668 chr3R 26456724 26456796 14 108 6.0 8.5 7.2 1.7 142 chr3R 26456654 intergenic CG14237 + chr3R 26456725 intergenic CG14237 + chr3R 26456796 intergenic CG14237 + chr3R_14_26455001 chr3R_26455001 RAL-850 3254 chr3R 26509235 26509268 chr3R 26509598 26509631 17 363 36.0 44.5 40.2 0.4 396 chr3R 26509235 intron plum - chr3R 26509433 intron plum - chr3R 26509631 intron plum - chr3R_17_26505001 chr3R_26505001 RAL-850 3255 chr3R 26510472 26510528 chr3R 26519577 26519633 roo 22 9105 9.5 10.5 10.0 2.0 9161 chr3R 26510472 intron plum - chr3R 26515052 intron plum - chr3R 26519633 intron,5` UTR plum -,CR45226 + chr3R_22_26515001 chr3R_26515001 RAL-850 3256 chr3R 26523359 26523408 chr3R 26523492 26523541 11 133 4.5 11.0 7.8 1.2 182 chr3R 26523359 intron plum - chr3R 26523450 intron plum - chr3R 26523541 intron plum - chr3R_11_26520001 chr3R_26520001 RAL-850 3257 chr3R 26541672 26541747 chr3R 26541957 26542032 34 283 8.0 6.0 7.0 4.2 360 chr3R 26541672 intron scrib + chr3R 26541852 intron scrib + chr3R 26542032 intron scrib + chr3R_34_26540001 chr3R_26540001 RAL-850 3258 chr3R 26558289 26558306 chr3R 26565651 26565668 Stalker4 10 7360 20.5 10.0 15.2 0.6 7379 chr3R 26558289 intron scrib + chr3R 26561978 intron scrib + chr3R 26565668 intron scrib + chr3R_10_26560001 chr3R_26560001 RAL-850 3259 chr3R 26558308 26558349 chr3R 26565642 26565711 Stalker4 18 7355 11.0 8.5 9.8 1.7 7403 chr3R 26558308 intron scrib + chr3R 26562010 intron scrib + chr3R 26565711 intron scrib + chr3R_18_26560001 chr3R_26560001 RAL-850 3260 chr3R 26592670 26592735 chr3R 26593334 26593399 14 664 2.5 8.0 5.2 2.3 729 chr3R 26592670 intron scrib + chr3R 26593034 intron scrib + chr3R 26593399 intron scrib + chr3R_14_26590001 chr3R_26590001 RAL-850 3261 chr3R 26604454 26604485 chr3R 26604583 26604584 7 127 13.0 10.5 11.8 0.5 130 chr3R 26604454 intergenic scrib + chr3R 26604519 intergenic scrib + chr3R 26604584 intergenic not near genes chr3R_7_26600001 chr3R_26600001 RAL-850 3262 chr3R 26604487 26604502 chr3R 26604573 26604629 7 103 10.0 8.5 9.2 0.7 142 chr3R 26604487 intergenic scrib + chr3R 26604558 intergenic not near genes chr3R 26604629 intergenic not near genes chr3R_7_26600001 chr3R_26600001 RAL-850 3263 chr3R 26642695 26642755 chr3R 26643134 26643198 jockey 21 443 14.0 7.0 10.5 1.8 503 chr3R 26642695 intergenic not near genes chr3R 26642946 intergenic not near genes chr3R 26643198 intergenic not near genes chr3R_21_26640001 chr3R_26640001 RAL-850 3264 chr3R 26660601 26660639 chr3R 26660734 26660773 22 130 12.0 11.5 11.8 1.7 172 chr3R 26660601 intron beat-VII - chr3R 26660687 intron beat-VII - chr3R 26660773 intron beat-VII - chr3R_22_26660001 chr3R_26660001 RAL-850 3265 chr3R 26660640 26660675 chr3R 26660733 26660781 16 124 6.5 11.0 8.8 1.6 141 chr3R 26660640 intron beat-VII - chr3R 26660710 intron beat-VII - chr3R 26660781 intron beat-VII - chr3R_16_26660001 chr3R_26660001 RAL-850 3266 chr3R 26770205 26770263 chr3R 26770332 26770390 29 127 9.0 10.5 9.8 2.7 185 chr3R 26770205 intergenic CR45563 + chr3R 26770298 intergenic CR45563 + chr3R 26770390 intergenic not near genes chr3R_29_26770001 chr3R_26770001 RAL-850 3267 chr3R 26810506 26810576 chr3R 26811041 26811091 roo 23 534 7.0 12.0 9.5 2.2 585 chr3R 26810506 intron Tl + chr3R 26810798 intron Tl + chr3R 26811091 intron Tl + chr3R_23_26810001 chr3R_26810001 RAL-850 3268 chr3R 26819697 26819753 chr3R 26819825 26819882 25 129 7.0 6.5 6.8 3.2 185 chr3R 26819697 intron Tl + chr3R 26819790 intron Tl + chr3R 26819882 intron Tl + chr3R_25_26815001 chr3R_26815001 RAL-850 3269 chr3R 26830309 26830325 chr3R 26830661 26830674 4 351 8.5 5.5 7.0 0.5 365 chr3R 26830309 intron Tl + chr3R 26830492 intron Tl + chr3R 26830674 intron Tl + chr3R_4_26830001 chr3R_26830001 RAL-850 3270 chr3R 26845546 26845596 chr3R 26845660 26845726 33 125 17.0 10.0 13.5 2.3 180 chr3R 26845546 intron Lerp - chr3R 26845636 intron Lerp - chr3R 26845726 intron Lerp - chr3R_33_26845001 chr3R_26845001 RAL-850 3271 chr3R 26985159 26985240 chr3R 26986264 26986297 27 1088 3.0 9.5 6.2 3.8 1138 chr3R 26985159 exon CG14253 + chr3R 26985728 exon CG31075 - chr3R 26986297 exon CG31075 - chr3R_27_26985001 chr3R_26985001 RAL-850 3272 chr3R 26990850 26990915 chr3R 26990980 26991048 30 131 7.5 10.0 8.8 3.1 198 chr3R 26990850 intergenic not near genes chr3R 26990949 intergenic not near genes chr3R 26991048 intergenic not near genes chr3R_30_26990001 chr3R_26990001 RAL-850 3273 chr3R 27007363 27007430 chr3R 27016548 27016615 roo 24 9183 11.5 7.0 9.2 2.4 9252 chr3R 27007363 intron RYa-R + chr3R 27011989 intron RYa-R + chr3R 27016615 intron RYa-R + chr3R_24_27010001 chr3R_27010001 RAL-850 3274 chr3R 27027633 27027691 chr3R 27027767 27027823 18 132 8.0 7.0 7.5 2.1 190 chr3R 27027633 intron RYa-R + chr3R 27027728 intron RYa-R + chr3R 27027823 intron RYa-R + chr3R_18_27025001 chr3R_27025001 RAL-850 3275 chr3R 27028677 27028756 chr3R 27028806 27028885 28 129 7.0 6.5 6.8 3.6 208 chr3R 27028677 exon RYa-R + chr3R 27028781 intron RYa-R + chr3R 27028885 intron RYa-R + chr3R_28_27025001 chr3R_27025001 RAL-850 3276 chr3R 27051619 27051642 chr3R 27051760 27051783 12 141 13.0 0.0 6.5 1.6 164 chr3R 27051619 intron RYa-R + chr3R 27051701 intron RYa-R + chr3R 27051783 intron RYa-R + chr3R_12_27050001 chr3R_27050001 RAL-850 3277 chr3R 27054474 27054539 chr3R 27054623 27054683 19 148 10.0 6.0 8.0 2.1 209 chr3R 27054474 intron RYa-R + chr3R 27054578 intron RYa-R + chr3R 27054683 intron RYa-R + chr3R_19_27050001 chr3R_27050001 RAL-850 3278 chr3R 27091388 27091405 chr3R 27091525 27091542 9 136 15.0 15.0 15.0 0.6 154 chr3R 27091388 intergenic Cpr97Eb - chr3R 27091465 intergenic Cpr97Eb - chr3R 27091542 intergenic Cpr97Eb - chr3R_9_27090001 chr3R_27090001 RAL-850 3279 chr3R 27091406 27091412 chr3R 27091521 27091534 6 131 12.0 14.0 13.0 0.4 128 chr3R 27091406 intergenic Cpr97Eb - chr3R 27091470 intergenic Cpr97Eb - chr3R 27091534 intergenic Cpr97Eb - chr3R_6_27090001 chr3R_27090001 RAL-850 3280 chr3R 27091419 27091430 chr3R 27091539 27091540 12 129 11.5 19.0 15.2 0.7 121 chr3R 27091419 intergenic Cpr97Eb - chr3R 27091480 intergenic Cpr97Eb - chr3R 27091540 intergenic Cpr97Eb - chr3R_12_27090001 chr3R_27090001 RAL-850 3281 chr3R 27091431 27091435 chr3R 27091531 27091571 6 126 11.0 17.0 14.0 0.4 140 chr3R 27091431 intergenic Cpr97Eb - chr3R 27091501 intergenic Cpr97Eb - chr3R 27091571 intergenic Cpr97Eb - chr3R_6_27090001 chr3R_27090001 RAL-850 3282 chr3R 27091437 27091462 chr3R 27091519 27091599 12 132 5.5 14.0 9.8 1.1 162 chr3R 27091437 intergenic Cpr97Eb - chr3R 27091518 intergenic Cpr97Eb - chr3R 27091599 intergenic Cpr97Eb - chr3R_12_27090001 chr3R_27090001 RAL-850 3283 chr3R 27140472 27140540 chr3R 27148127 27148200 412 38 7657 12.0 8.0 10.0 3.5 7728 chr3R 27140472 intron CG6051 - chr3R 27144336 intron CG6051 - chr3R 27148200 intron CG6051 - chr3R_38_27140001 chr3R_27140001 RAL-850 3284 chr3R 27292256 27292305 chr3R 27292389 27292454 36 142 6.5 6.0 6.2 5.0 198 chr3R 27292256 intergenic CG3348 - chr3R 27292355 intergenic CG3348 - chr3R 27292454 intergenic CG3348 - chr3R_36_27290001 chr3R_27290001 RAL-850 3285 chr3R 27315945 27316012 chr3R 27316071 27316131 24 123 8.0 7.0 7.5 2.8 186 chr3R 27315945 intron CG3339 - chr3R 27316038 intron CG3339 - chr3R 27316131 exon CG3339 - chr3R_24_27315001 chr3R_27315001 RAL-850 3286 chr3R 27329429 27329497 chr3R 27329556 27329624 14 127 8.5 5.0 6.8 1.8 195 chr3R 27329429 intergenic CG3330 - chr3R 27329526 intergenic CG3330 - chr3R 27329624 intergenic CG3330 - chr3R_14_27325001 chr3R_27325001 RAL-850 3287 chr3R 27334620 27334686 chr3R 27334742 27334809 31 130 8.5 9.5 9.0 3.1 189 chr3R 27334620 intergenic not near genes chr3R 27334714 intergenic not near genes chr3R 27334809 intergenic not near genes chr3R_31_27330001 chr3R_27330001 RAL-850 3288 chr3R 27335898 27335935 chr3R 27336029 27336066 14 130 10.0 0.0 5.0 2.3 168 chr3R 27335898 intergenic not near genes chr3R 27335982 intergenic not near genes chr3R 27336066 intergenic not near genes chr3R_14_27335001 chr3R_27335001 RAL-850 3289 chr3R 27342751 27342818 chr3R 27351382 27351449 Tirant 22 8631 9.0 9.5 9.2 2.2 8698 chr3R 27342751 intron CG42534 + chr3R 27347100 intron CG42534 + chr3R 27351449 intron CG42534 + chr3R_22_27345001 chr3R_27345001 RAL-850 3290 chr3R 27393705 27393779 chr3R 27393835 27393913 18 132 8.0 6.5 7.2 2.2 208 chr3R 27393705 intron side - chr3R 27393809 intron side - chr3R 27393913 intron side - chr3R_18_27390001 chr3R_27390001 RAL-850 3291 chr3R 27398649 27398660 chr3R 27398778 27398789 7 129 0.0 7.0 3.5 1.6 140 chr3R 27398649 intron side - chr3R 27398719 intron side - chr3R 27398789 intron side - chr3R_7_27395001 chr3R_27395001 RAL-850 3292 chr3R 27404896 27404950 chr3R 27405026 27405080 16 123 12.5 12.0 12.2 1.2 184 chr3R 27404896 intron side - chr3R 27404988 intron side - chr3R 27405080 intron side - chr3R_16_27400001 chr3R_27400001 RAL-850 3293 chr3R 27445226 27445273 chr3R 27445323 27445400 18 120 6.5 7.0 6.8 2.3 174 chr3R 27445226 intergenic not near genes chr3R 27445313 intergenic not near genes chr3R 27445400 intergenic not near genes chr3R_18_27445001 chr3R_27445001 RAL-850 3294 chr3R 27465230 27465295 chr3R 27465991 27466056 35 759 45.5 53.5 49.5 0.7 826 chr3R 27465230 exon CG13978 + chr3R 27465643 exon CG13978 + chr3R 27466056 exon CG13978 + chr3R_35_27465001 chr3R_27465001 RAL-850 3295 chr3R 27464807 27464877 chr3R 27466986 27467055 26 2179 79.5 49.0 64.2 0.4 2248 chr3R 27464807 exon CG13978 + chr3R 27465931 exon CG13978 + chr3R 27467055 3` UTR CG13978 + chr3R_26_27465001 chr3R_27465001 RAL-850 3296 chr3R 27468410 27468475 chr3R 27468876 27468941 20 464 8.5 10.0 9.2 2.0 531 chr3R 27468410 intergenic not near genes chr3R 27468676 intergenic not near genes chr3R 27468941 intergenic not near genes chr3R_20_27465001 chr3R_27465001 RAL-850 3297 chr3R 27496565 27496601 chr3R 27496720 27496756 15 155 8.5 13.5 11.0 1.2 191 chr3R 27496565 intergenic not near genes chr3R 27496660 intergenic not near genes chr3R 27496756 intergenic not near genes chr3R_15_27495001 chr3R_27495001 RAL-850 3298 chr3R 27506261 27506284 chr3R 27506393 27506416 8 131 0.0 14.0 7.0 1.0 155 chr3R 27506261 intergenic not near genes chr3R 27506338 intergenic not near genes chr3R 27506416 intergenic not near genes chr3R_8_27505001 chr3R_27505001 RAL-850 3299 chr3R 27511204 27511224 chr3R 27511341 27511361 14 136 23.5 9.5 16.5 0.8 157 chr3R 27511204 intergenic not near genes chr3R 27511282 intergenic not near genes chr3R 27511361 intergenic not near genes chr3R_14_27510001 chr3R_27510001 RAL-850 3300 chr3R 27511232 27511278 chr3R 27511357 27511415 23 135 9.5 12.0 10.8 1.9 183 chr3R 27511232 intergenic not near genes chr3R 27511324 intergenic not near genes chr3R 27511415 intergenic not near genes chr3R_23_27510001 chr3R_27510001 RAL-850 3301 chr3R 27521116 27521178 chr3R 27530375 27530437 roo 19 9259 9.5 8.5 9.0 1.9 9321 chr3R 27521116 intron CG12885 + chr3R 27525776 intron CG12885 + chr3R 27530437 intron CG12885 + chr3R_19_27525001 chr3R_27525001 RAL-850 3302 chr3R 27660664 27660740 chr3R 27660792 27660866 24 125 9.0 6.5 7.8 2.7 202 chr3R 27660664 intergenic Mlc1 - chr3R 27660765 intergenic not near genes chr3R 27660866 intergenic not near genes chr3R_24_27660001 chr3R_27660001 RAL-850 3303 chr3R 27706732 27706792 chr3R 27706858 27706919 23 126 13.0 11.5 12.2 1.7 187 chr3R 27706732 5` UTR CG12428 - chr3R 27706826 intergenic CG12428 -,CG12877 + chr3R 27706919 intergenic CG12428 -,CG12877 + chr3R_23_27705001 chr3R_27705001 RAL-850 3304 chr3R 27725554 27725603 chr3R 27731047 27731085 I-element 8 5492 4.0 15.0 9.5 0.8 5531 chr3R 27725554 intergenic not near genes chr3R 27728320 intergenic not near genes chr3R 27731085 intergenic not near genes chr3R_8_27725001 chr3R_27725001 RAL-850 3305 chr3R 27779228 27779280 chr3R 27779348 27779410 23 124 1.5 10.5 6.0 3.3 182 chr3R 27779228 exon CG34353 - chr3R 27779319 intron CG34353 - chr3R 27779410 intron CG34353 - chr3R_23_27775001 chr3R_27775001 RAL-850 3306 chr3R 27791601 27791646 chr3R 27794793 27794811 Rt1c 10 3186 13.0 13.5 13.2 0.7 3210 chr3R 27791601 intron CG34353 - chr3R 27793206 intron CG34353 - chr3R 27794811 intron CG34353 - chr3R_10_27790001 chr3R_27790001 RAL-850 3307 chr3R 27799888 27799964 chr3R 27800020 27800096 35 132 9.0 9.0 9.0 3.5 208 chr3R 27799888 intron CG34353 - chr3R 27799992 intron CG34353 - chr3R 27800096 intron CG34353 - chr3R_35_27795001 chr3R_27795001 RAL-850 3308 chr3R 27840189 27840264 chr3R 27840374 27840447 14 181 0.0 0.0 0.0 14.0 258 chr3R 27840189 intron CG34353 - chr3R 27840318 intron CG34353 - chr3R 27840447 intron CG34353 - chr3R_14_27840001 chr3R_27840001 RAL-850 3309 chr3R 27856716 27856777 chr3R 27858249 27858310 hopper2 22 1532 10.5 9.0 9.8 2.0 1594 chr3R 27856716 intron CG34353 - chr3R 27857513 intron CG34353 - chr3R 27858310 intron CG34353 - chr3R_22_27855001 chr3R_27855001 RAL-850 3310 chr3R 27862931 27862953 chr3R 27868287 27868309 Transpac 10 5356 0.0 11.0 5.5 1.5 5378 chr3R 27862931 intron CG34353 - chr3R 27865620 intron CG34353 - chr3R 27868309 intron CG34353 - chr3R_10_27865001 chr3R_27865001 RAL-850 3311 chr3R 27875661 27875723 chr3R 27882766 27882828 297 25 7103 12.5 13.5 13.0 1.8 7167 chr3R 27875661 intron CG34353 - chr3R 27879244 intron CG34353 - chr3R 27882828 intron CG34353 - chr3R_25_27875001 chr3R_27875001 RAL-850 3312 chr3R 27970788 27970860 chr3R 27970927 27970999 5 137 9.0 3.0 6.0 0.7 211 chr3R 27970788 intron betaTub97EF - chr3R 27970894 intron betaTub97EF - chr3R 27970999 intron betaTub97EF - chr3R_5_27970001 chr3R_27970001 RAL-850 3313 chr3R 28002860 28002920 chr3R 28002987 28003047 18 127 9.5 8.0 8.8 1.8 187 chr3R 28002860 intergenic not near genes chr3R 28002954 intergenic not near genes chr3R 28003047 intergenic not near genes chr3R_18_28000001 chr3R_28000001 RAL-850 3314 chr3R 28035450 28035504 chr3R 28035577 28035631 12 125 4.5 10.0 7.2 1.5 181 chr3R 28035450 intron CG34362 + chr3R 28035540 intron CG34362 + chr3R 28035631 intron CG34362 + chr3R_12_28035001 chr3R_28035001 RAL-850 3315 chr3R 28043820 28043878 chr3R 28043985 28044042 28 165 2.0 5.0 3.5 6.2 222 chr3R 28043820 intron CG34362 + chr3R 28043931 intron CG34362 + chr3R 28044042 intron CG34362 + chr3R_28_28040001 chr3R_28040001 RAL-850 3316 chr3R 28068453 28068510 chr3R 28073945 28074002 I-element 26 5489 7.0 5.5 6.2 3.6 5549 chr3R 28068453 intron CG34362 + chr3R 28071228 intron CG34362 + chr3R 28074002 intron CG34362 + chr3R_26_28070001 chr3R_28070001 RAL-850 3317 chr3R 28173628 28173696 chr3R 28181108 28181176 mdg1 24 7480 8.5 5.5 7.0 3.0 7548 chr3R 28173628 intron CG34354 + chr3R 28177402 intron CG34354 + chr3R 28181176 intron CG34354 + chr3R_24_28175001 chr3R_28175001 RAL-850 3318 chr3R 28253320 28253355 chr3R 28255852 28255915 jockey 18 2550 8.5 6.5 7.5 2.1 2595 chr3R 28253320 intergenic not near genes chr3R 28254618 intergenic not near genes chr3R 28255915 intergenic not near genes chr3R_18_28250001 chr3R_28250001 RAL-850 3319 chr3R 28282946 28283011 chr3R 28283625 28283690 45 679 12.0 10.5 11.2 3.7 744 chr3R 28282946 exon CG34436 + chr3R 28283318 exon CG34436 + chr3R 28283690 intergenic CG34437 +,CG34436 + chr3R_45_28280001 chr3R_28280001 RAL-850 3320 chr3R 28302068 28302122 chr3R 28302557 28302611 jockey 21 489 14.5 12.5 13.5 1.4 543 chr3R 28302068 intergenic not near genes chr3R 28302340 intergenic not near genes chr3R 28302611 intergenic not near genes chr3R_21_28300001 chr3R_28300001 RAL-850 3321 chr3R 28331489 28331525 chr3R 28331618 28331654 8 129 2.5 11.5 7.0 1.0 165 chr3R 28331489 intron larp - chr3R 28331572 intron larp - chr3R 28331654 intron larp - chr3R_8_28330001 chr3R_28330001 RAL-850 3322 chr3R 28340994 28341058 chr3R 28341121 28341185 19 126 8.5 8.0 8.2 2.1 191 chr3R 28340994 intron Moca-cyp + chr3R 28341090 intron Moca-cyp + chr3R 28341185 intron Moca-cyp + chr3R_19_28340001 chr3R_28340001 RAL-850 3323 chr3R 28352470 28352536 chr3R 28352860 28352926 33 388 13.0 13.0 13.0 2.4 456 chr3R 28352470 exon Or98b + chr3R 28352698 exon Or98b + chr3R 28352926 exon Or98b + chr3R_33_28350001 chr3R_28350001 RAL-850 3324 chr3R 28387429 28387486 chr3R 28387587 28387644 23 157 9.0 7.5 8.2 2.5 215 chr3R 28387429 intergenic not near genes chr3R 28387536 intergenic not near genes chr3R 28387644 intergenic not near genes chr3R_23_28385001 chr3R_28385001 RAL-850 3325 chr3R 28390081 28390142 chr3R 28390192 28390258 25 112 3.5 1.5 2.5 7.1 177 chr3R 28390081 intergenic not near genes chr3R 28390170 intergenic not near genes chr3R 28390258 intergenic not near genes chr3R_25_28390001 chr3R_28390001 RAL-850 3326 chr3R 28393651 28393725 chr3R 28393801 28393875 39 150 11.0 9.0 10.0 3.5 224 chr3R 28393651 intergenic not near genes chr3R 28393763 intergenic not near genes chr3R 28393875 intergenic not near genes chr3R_39_28390001 chr3R_28390001 RAL-850 3327 chr3R 28416079 28416100 chr3R 28416246 28416267 8 160 31.5 15.0 23.2 0.3 188 chr3R 28416079 intergenic not near genes chr3R 28416173 intergenic not near genes chr3R 28416267 intergenic not near genes chr3R_8_28415001 chr3R_28415001 RAL-850 3328 chr3R 28416102 28416127 chr3R 28416243 28416294 12 156 21.0 14.5 17.8 0.6 192 chr3R 28416102 intergenic not near genes chr3R 28416198 intergenic not near genes chr3R 28416294 intergenic not near genes chr3R_12_28415001 chr3R_28415001 RAL-850 3329 chr3R 28478375 28478449 chr3R 28478504 28478537 35 126 12.0 10.0 11.0 2.9 162 chr3R 28478375 intergenic not near genes chr3R 28478456 intergenic not near genes chr3R 28478537 intergenic not near genes chr3R_35_28475001 chr3R_28475001 RAL-850 3330 chr3R 28479096 28479168 chr3R 28479229 28479301 18 133 13.0 9.5 11.2 1.5 205 chr3R 28479096 intergenic not near genes chr3R 28479198 intergenic not near genes chr3R 28479301 intergenic not near genes chr3R_18_28475001 chr3R_28475001 RAL-850 3331 chr3R 28480275 28480328 chr3R 28480405 28480459 18 131 8.5 10.0 9.2 1.8 184 chr3R 28480275 intergenic not near genes chr3R 28480367 intergenic not near genes chr3R 28480459 intergenic not near genes chr3R_18_28480001 chr3R_28480001 RAL-850 3332 chr3R 28484353 28484354 chr3R 28486220 28486292 118 1869 74.0 160.0 117.0 1.0 1939 chr3R 28484353 intergenic CG1894 + chr3R 28485322 exon CG1894 + chr3R 28486292 intergenic CG1894 + chr3R_118_28485001 chr3R_28485001 RAL-850 3333 chr3R 28554656 28554718 chr3R 28554797 28554824 27 137 7.5 9.0 8.2 2.9 168 chr3R 28554656 intergenic not near genes chr3R 28554740 intergenic not near genes chr3R 28554824 intergenic not near genes chr3R_27_28550001 chr3R_28550001 RAL-850 3334 chr3R 28633149 28633164 chr3R 28633279 28633294 10 130 24.0 9.0 16.5 0.6 145 chr3R 28633149 intron CG10011 - chr3R 28633222 intron CG10011 - chr3R 28633294 intron CG10011 - chr3R_10_28630001 chr3R_28630001 RAL-850 3335 chr3R 28633165 28633219 chr3R 28633276 28633347 33 127 10.0 9.0 9.5 3.1 182 chr3R 28633165 intron CG10011 - chr3R 28633256 intron CG10011 - chr3R 28633347 intron CG10011 - chr3R_33_28630001 chr3R_28630001 RAL-850 3336 chr3R 28658463 28658524 chr3R 28658642 28658688 26 190 7.5 11.5 9.5 2.5 225 chr3R 28658463 intergenic not near genes chr3R 28658576 intergenic not near genes chr3R 28658688 intergenic not near genes chr3R_26_28655001 chr3R_28655001 RAL-850 3337 chr3R 28758242 28758254 chr3R 28763908 28763921 roo 7 5665 24.0 0.0 12.0 0.5 5679 chr3R 28758242 intergenic aqrs - chr3R 28761082 intergenic not near genes chr3R 28763921 intergenic not near genes chr3R_7_28760001 chr3R_28760001 RAL-850 3338 chr3R 28758276 28758319 chr3R 28771333 28771376 Stalker4 12 13057 8.0 5.5 6.8 1.5 13100 chr3R 28758276 intergenic aqrs - chr3R 28764826 intergenic not near genes chr3R 28771376 intergenic not near genes chr3R_12_28760001 chr3R_28760001 RAL-850 3339 chr3R 28763907 28763920 chr3R 28771400 28771413 Stalker4 8 7493 0.0 12.5 6.2 1.1 7506 chr3R 28763907 intergenic not near genes chr3R 28767660 intergenic not near genes chr3R 28771413 intergenic not near genes chr3R_8_28765001 chr3R_28765001 RAL-850 3340 chr3R 28792827 28792898 chr3R 28797967 28798043 jockey 25 5138 7.0 6.0 6.5 3.3 5216 chr3R 28792827 intergenic not near genes chr3R 28795435 intergenic not near genes chr3R 28798043 intergenic not near genes chr3R_25_28795001 chr3R_28795001 RAL-850 3341 chr3R 28830847 28830908 chr3R 28830975 28831036 28 126 14.5 13.5 14.0 1.9 189 chr3R 28830847 intron WASp - chr3R 28830942 intron WASp - chr3R 28831036 intron WASp - chr3R_28_28830001 chr3R_28830001 RAL-850 3342 chr3R 21907534 21907536 chr3R 28831798 28831802 83 6924266 38.0 33.0 35.5 2.3 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_83_25365001 chr3R_25365001 RAL-850 3343 chr3R 28862099 28862173 chr3R 28862226 28862300 33 127 7.5 9.5 8.5 3.5 201 chr3R 28862099 intron spg + chr3R 28862200 intron spg + chr3R 28862300 intron spg + chr3R_33_28860001 chr3R_28860001 RAL-850 3344 chr3R 28882869 28882945 chr3R 28883036 28883110 27 166 6.0 3.0 4.5 4.9 241 chr3R 28882869 intron,exon CG33203 -,CG14527 + chr3R 28882990 intron CG33203 - chr3R 28883110 intron CG33203 - chr3R_27_28880001 chr3R_28880001 RAL-850 3345 chr3R 28922714 28922772 chr3R 28922840 28922898 13 126 6.0 0.0 3.0 3.2 184 chr3R 28922714 3` UTR Doa + chr3R 28922806 intergenic Doa +,CG11828 + chr3R 28922898 intergenic Doa +,CG11828 + chr3R_13_28920001 chr3R_28920001 RAL-850 3346 chr3R 28950203 28950249 chr3R 28950334 28950380 22 131 8.0 5.5 6.8 2.8 177 chr3R 28950203 intron CG14521 - chr3R 28950292 intron CG14521 - chr3R 28950380 intron CG14521 - chr3R_22_28950001 chr3R_28950001 RAL-850 3347 chr3R 29006851 29006870 chr3R 29006973 29006997 5 122 19.5 18.0 18.8 0.3 146 chr3R 29006851 intron wat - chr3R 29006924 intron wat - chr3R 29006997 intron wat - chr3R_5_29005001 chr3R_29005001 RAL-850 3348 chr3R 29009908 29009980 chr3R 29010064 29010136 34 154 7.5 9.0 8.2 3.7 228 chr3R 29009908 intron wat - chr3R 29010022 intron wat - chr3R 29010136 intron wat - chr3R_34_29010001 chr3R_29010001 RAL-850 3349 chr3R 29032699 29032777 chr3R 29032826 29032910 35 125 12.0 10.5 11.2 2.9 211 chr3R 29032699 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032804 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032910 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_35_29030001 chr3R_29030001 RAL-850 3350 chr3R 29034026 29034061 chr3R 29034472 29034499 4 443 10.5 10.0 10.2 0.4 473 chr3R 29034026 5` UTR CR45044 + chr3R 29034262 intergenic CR45044 +,beta4GalNAcTB -,Cpsf100 + chr3R 29034499 intergenic Cpsf100 +,CR45044 +,beta4GalNAcTB - chr3R_4_29030001 chr3R_29030001 RAL-850 3351 chr3R 29034072 29034095 chr3R 29034463 29034540 8 438 4.0 5.5 4.8 1.4 468 chr3R 29034072 5` UTR CR45044 + chr3R 29034306 intergenic CR45044 +,Cpsf100 +,beta4GalNAcTB - chr3R 29034540 intergenic Cpsf100 +,CR45044 + chr3R_8_29030001 chr3R_29030001 RAL-850 3352 chr3R 29053687 29053762 chr3R 29054247 29054322 17 560 4.5 3.5 4.0 3.4 635 chr3R 29053687 exon CG11842 + chr3R 29054004 intergenic CG11842 +,CG11843 + chr3R 29054322 intergenic CG11843 +,CG11842 + chr3R_17_29050001 chr3R_29050001 RAL-850 3353 chr3R 29070009 29070074 chr3R 29070140 29070205 19 131 9.0 9.5 9.2 1.9 196 chr3R 29070009 intron CG11873 + chr3R 29070107 intron CG11873 + chr3R 29070205 intron CG11873 + chr3R_19_29070001 chr3R_29070001 RAL-850 3354 chr3R 29076083 29076146 chr3R 29076310 29076365 14 219 6.0 8.5 7.2 1.7 282 chr3R 29076083 intron CG11873 + chr3R 29076224 intron CG11873 + chr3R 29076365 intron CG11873 + chr3R_14_29075001 chr3R_29075001 RAL-850 3355 chr3R 29079341 29079408 chr3R 29080763 29080830 NOF 24 1420 7.0 9.0 8.0 2.7 1489 chr3R 29079341 intron CG11873 + chr3R 29080086 intron CG11873 + chr3R 29080830 intron CG11873 + chr3R_24_29080001 chr3R_29080001 RAL-850 3356 chr3R 29091381 29091438 chr3R 29091518 29091544 12 132 11.0 21.5 16.2 0.7 163 chr3R 29091381 intron CG11873 + chr3R 29091462 intron CG11873 + chr3R 29091544 intron CG11873 + chr3R_12_29090001 chr3R_29090001 RAL-850 3357 chr3R 29203803 29203820 chr3R 29203933 29203950 9 129 20.0 0.0 10.0 0.8 147 chr3R 29203803 5` UTR CG14508 - chr3R 29203876 intron CG14508 - chr3R 29203950 intron CG14508 - chr3R_9_29200001 chr3R_29200001 RAL-850 3358 chr3R 29211164 29211219 chr3R 29211310 29211322 32 158 0.0 8.5 4.2 6.2 158 chr3R 29211164 intergenic not near genes chr3R 29211243 intergenic not near genes chr3R 29211322 intergenic not near genes chr3R_32_29210001 chr3R_29210001 RAL-850 3359 chr3R 29236548 29236554 chr3R 29242055 29242055 4 5506 30.5 41.0 35.8 0.1 5507 chr3R 29236548 exon CG11951 - chr3R 29239302 exon CG31427 - chr3R 29242055 exon CG31445 - chr3R_4_29235001 chr3R_29235001 RAL-850 3360 chr3R 29237234 29237254 chr3R 29239279 29239320 6 2057 52.0 11.0 31.5 0.2 2086 chr3R 29237234 exon CG11951 - chr3R 29238277 intron CG11951 - chr3R 29239320 exon CG31427 - chr3R_6_29235001 chr3R_29235001 RAL-850 3361 chr3R 29237256 29237282 chr3R 29239266 29239302 13 2058 40.5 9.0 24.8 0.5 2046 chr3R 29237256 exon CG11951 - chr3R 29238279 intron CG11951 - chr3R 29239302 exon CG31427 - chr3R_13_29235001 chr3R_29235001 RAL-850 3362 chr3R 29238728 29238787 chr3R 29238892 29238951 26 163 7.5 10.5 9.0 2.6 223 chr3R 29238728 intergenic CG11951 -,CG31427 - chr3R 29238840 3` UTR CG31427 - chr3R 29238951 3` UTR CG31427 - chr3R_26_29235001 chr3R_29235001 RAL-850 3363 chr3R 29239210 29239247 chr3R 29245519 29245559 14 6322 9.5 54.5 32.0 0.4 6349 chr3R 29239210 exon CG31427 - chr3R 29242384 exon CG31445 - chr3R 29245559 exon SP1029 - chr3R_14_29240001 chr3R_29240001 RAL-850 3364 chr3R 29249858 29249907 chr3R 29249997 29250046 6 139 0.0 3.5 1.8 2.1 188 chr3R 29249858 intron SP1029 - chr3R 29249952 intron SP1029 - chr3R 29250046 intron SP1029 - chr3R_6_29245001 chr3R_29245001 RAL-850 3365 chr3R 29276841 29276909 chr3R 29277834 29277892 14 984 9.5 0.5 5.0 2.3 1051 chr3R 29276841 3` UTR CR45568 - chr3R 29277366 intergenic CR45568 - chr3R 29277892 intergenic not near genes chr3R_14_29275001 chr3R_29275001 RAL-850 3366 chr3R 29282765 29282813 chr3R 29282896 29282945 19 130 10.0 17.0 13.5 1.3 180 chr3R 29282765 intergenic not near genes chr3R 29282855 intergenic not near genes chr3R 29282945 intergenic not near genes chr3R_19_29280001 chr3R_29280001 RAL-850 3367 chr3R 29319778 29319848 chr3R 29320147 29320217 jockey 14 368 9.0 8.0 8.5 1.5 439 chr3R 29319778 intergenic Cnx99A - chr3R 29319998 intergenic Cnx99A - chr3R 29320217 intergenic not near genes chr3R_14_29315001 chr3R_29315001 RAL-850 3368 chr3R 29322768 29322832 chr3R 29322896 29322960 21 127 10.0 5.0 7.5 2.5 192 chr3R 29322768 intergenic not near genes chr3R 29322864 intergenic not near genes chr3R 29322960 intergenic not near genes chr3R_21_29320001 chr3R_29320001 RAL-850 3369 chr3R 29325478 29325505 chr3R 29325628 29325643 4 144 0.0 0.0 0.0 4.0 165 chr3R 29325478 intergenic not near genes chr3R 29325560 intergenic not near genes chr3R 29325643 intergenic not near genes chr3R_4_29325001 chr3R_29325001 RAL-850 3370 chr3R 29334183 29334243 chr3R 29334310 29334332 27 116 18.0 15.0 16.5 1.5 149 chr3R 29334183 intergenic not near genes chr3R 29334258 intergenic not near genes chr3R 29334332 intergenic not near genes chr3R_27_29330001 chr3R_29330001 RAL-850 3371 chr3R 29336331 29336349 chr3R 29336458 29336476 7 127 6.5 17.0 11.8 0.5 145 chr3R 29336331 intergenic not near genes chr3R 29336404 intergenic not near genes chr3R 29336476 intergenic not near genes chr3R_7_29335001 chr3R_29335001 RAL-850 3372 chr3R 29406572 29406640 chr3R 29407908 29407963 jockey 16 1323 13.0 7.5 10.2 1.4 1391 chr3R 29406572 intron Ptp99A + chr3R 29407268 intron Ptp99A + chr3R 29407963 intron Ptp99A + chr3R_16_29405001 chr3R_29405001 RAL-850 3373 chr3R 29429737 29429804 chr3R 29429865 29429917 26 121 4.5 6.5 5.5 4.0 180 chr3R 29429737 intron Ptp99A + chr3R 29429827 intron Ptp99A + chr3R 29429917 intron Ptp99A + chr3R_26_29425001 chr3R_29425001 RAL-850 3374 chr3R 29433567 29433626 chr3R 29433698 29433767 23 133 10.0 11.0 10.5 2.0 200 chr3R 29433567 intron Ptp99A + chr3R 29433667 intron Ptp99A + chr3R 29433767 intron Ptp99A + chr3R_23_29430001 chr3R_29430001 RAL-850 3375 chr3R 29447240 29447311 chr3R 29447373 29447444 35 133 2.0 8.5 5.2 5.6 204 chr3R 29447240 intron Ptp99A + chr3R 29447342 intron Ptp99A + chr3R 29447444 intron Ptp99A + chr3R_35_29445001 chr3R_29445001 RAL-850 3376 chr3R 29449314 29449378 chr3R 29449442 29449506 26 126 9.5 10.0 9.8 2.4 192 chr3R 29449314 intron Ptp99A + chr3R 29449410 intron Ptp99A + chr3R 29449506 intron Ptp99A + chr3R_26_29445001 chr3R_29445001 RAL-850 3377 chr3R 29452104 29452186 chr3R 29452232 29452291 29 120 9.0 8.0 8.5 3.1 187 chr3R 29452104 intron Ptp99A + chr3R 29452198 intron Ptp99A + chr3R 29452291 intron Ptp99A + chr3R_29_29450001 chr3R_29450001 RAL-850 3378 chr3R 29498859 29498925 chr3R 29499039 29499105 29 179 9.5 7.5 8.5 3.1 246 chr3R 29498859 3` UTR CG2010 + chr3R 29498982 intergenic Trc8 -,CG2010 + chr3R 29499105 3` UTR Trc8 - chr3R_29_29495001 chr3R_29495001 RAL-850 3379 chr3R 29505842 29505922 chr3R 29505969 29506034 37 124 9.0 13.0 11.0 3.1 192 chr3R 29505842 intergenic not near genes chr3R 29505938 intergenic not near genes chr3R 29506034 intergenic not near genes chr3R_37_29505001 chr3R_29505001 RAL-850 3380 chr3R 29539381 29539414 chr3R 29539507 29539535 17 125 15.0 0.5 7.8 1.9 154 chr3R 29539381 intergenic not near genes chr3R 29539458 intergenic not near genes chr3R 29539535 intergenic not near genes chr3R_17_29535001 chr3R_29535001 RAL-850 3381 chr3R 29576685 29576750 chr3R 29576842 29576898 8 154 4.0 0.0 2.0 2.7 213 chr3R 29576685 intergenic not near genes chr3R 29576792 intergenic not near genes chr3R 29576898 intergenic not near genes chr3R_8_29575001 chr3R_29575001 RAL-850 3382 chr3R 29590326 29590346 chr3R 29590469 29590489 6 143 21.5 11.0 16.2 0.3 163 chr3R 29590326 exon CG31041 - chr3R 29590408 intron CG31041 - chr3R 29590489 intron CG31041 - chr3R_6_29590001 chr3R_29590001 RAL-850 3383 chr3R 29590357 29590398 chr3R 29590467 29590541 22 140 7.0 10.5 8.8 2.2 184 chr3R 29590357 exon CG31041 - chr3R 29590449 intron CG31041 - chr3R 29590541 exon CG31041 - chr3R_22_29590001 chr3R_29590001 RAL-850 3384 chr3R 29627530 29627716 chr3R 29627651 29627877 54 144 0.0 0.5 0.2 45.0 347 chr3R 29627530 intergenic not near genes chr3R 29627704 intergenic not near genes chr3R 29627877 intergenic not near genes chr3R_54_29625001 chr3R_29625001 RAL-850 3385 chr3R 29639130 29639145 chr3R 29639285 29639300 7 155 16.0 7.5 11.8 0.5 170 chr3R 29639130 intron Dop1R2 - chr3R 29639215 intron Dop1R2 - chr3R 29639300 intron Dop1R2 - chr3R_7_29635001 chr3R_29635001 RAL-850 3386 chr3R 29639147 29639198 chr3R 29639280 29639353 21 152 6.0 6.0 6.0 3.0 206 chr3R 29639147 intron Dop1R2 - chr3R 29639250 intron Dop1R2 - chr3R 29639353 intron Dop1R2 - chr3R_21_29635001 chr3R_29635001 RAL-850 3387 chr3R 29648967 29649011 chr3R 29649107 29649151 16 139 3.5 9.0 6.2 2.2 184 chr3R 29648967 intron Dop1R2 - chr3R 29649059 intron Dop1R2 - chr3R 29649151 intron Dop1R2 - chr3R_16_29645001 chr3R_29645001 RAL-850 3388 chr3R 29702101 29702155 chr3R 29702232 29702288 18 132 8.0 0.0 4.0 3.6 187 chr3R 29702101 intergenic not near genes chr3R 29702194 intergenic not near genes chr3R 29702288 intergenic not near genes chr3R_18_29700001 chr3R_29700001 RAL-850 3389 chr3R 29738220 29738292 chr3R 29739736 29739809 hobo 29 1515 7.0 6.0 6.5 3.9 1589 chr3R 29738220 intergenic CG1969 +,CG7598 + chr3R 29739014 intron CG1969 + chr3R 29739809 5` UTR CG1969 + chr3R_29_29735001 chr3R_29735001 RAL-850 3390 chr3R 29760319 29760380 chr3R 29761570 29761631 pogo 13 1251 12.5 9.0 10.8 1.1 1312 chr3R 29760319 intergenic not near genes chr3R 29760975 intergenic not near genes chr3R 29761631 intergenic not near genes chr3R_13_29760001 chr3R_29760001 RAL-850 3391 chr3R 29881977 29882002 chr3R 29891184 29891209 roo 17 9207 23.5 9.0 16.2 1.0 9232 chr3R 29881977 intron CG31038 + chr3R 29886593 intron CG31038 + chr3R 29891209 intron CG31038 + chr3R_17_29885001 chr3R_29885001 RAL-850 3392 chr3R 29882005 29882045 chr3R 29891181 29891252 roo 28 9206 11.5 9.0 10.2 2.5 9247 chr3R 29882005 intron CG31038 + chr3R 29886628 intron CG31038 + chr3R 29891252 intron CG31038 + chr3R_28_29885001 chr3R_29885001 RAL-850 3393 chr3R 29923653 29923719 chr3R 29925206 29925274 12 1555 45.5 56.0 50.8 0.2 1621 chr3R 29923653 intergenic Jon99Cii -,Jon99Ciii + chr3R 29924464 exon Jon99Cii - chr3R 29925274 3` UTR Jon99Ci - chr3R_12_29920001 chr3R_29920001 RAL-850 3394 chr3R 29950524 29950598 chr3R 29950651 29950718 17 114 5.0 4.5 4.8 2.9 194 chr3R 29950524 intergenic TkR99D - chr3R 29950621 intergenic TkR99D - chr3R 29950718 intergenic TkR99D - chr3R_17_29950001 chr3R_29950001 RAL-850 3395 chr3R 29959233 29959300 chr3R 29959352 29959429 30 127 9.0 7.0 8.0 3.3 196 chr3R 29959233 exon TkR99D - chr3R 29959331 intron TkR99D - chr3R 29959429 intron TkR99D - chr3R_30_29955001 chr3R_29955001 RAL-850 3396 chr3R 29982454 29982472 chr3R 29982567 29982602 22 126 12.5 7.5 10.0 2.0 148 chr3R 29982454 intergenic not near genes chr3R 29982528 intergenic not near genes chr3R 29982602 intergenic not near genes chr3R_22_29980001 chr3R_29980001 RAL-850 3397 chr3R 30025229 30025309 chr3R 30025355 30025435 4 126 3.5 4.0 3.8 0.8 206 chr3R 30025229 intron Axn + chr3R 30025332 intron Axn + chr3R 30025435 intron Axn + chr3R_4_30025001 chr3R_30025001 RAL-850 3398 chr3R 30030394 30030461 chr3R 30030514 30030595 30 124 8.0 8.5 8.2 3.3 201 chr3R 30030394 intron Axn + chr3R 30030494 intron Axn + chr3R 30030595 intron Axn + chr3R_30_30030001 chr3R_30030001 RAL-850 3399 chr3R 30032121 30032130 chr3R 30032244 30032259 7 128 16.5 10.5 13.5 0.5 138 chr3R 30032121 intron Axn + chr3R 30032190 intron Axn + chr3R 30032259 intron Axn + chr3R_7_30030001 chr3R_30030001 RAL-850 3400 chr3R 30080938 30081004 chr3R 30081440 30081506 17 502 6.5 7.0 6.8 2.2 568 chr3R 30080938 intron sima + chr3R 30081222 intron sima + chr3R 30081506 intron sima + chr3R_17_30080001 chr3R_30080001 RAL-850 3401 chr3R 30084871 30084876 chr3R 30086363 30086383 hobo 4 1508 1.5 17.0 9.2 0.4 1512 chr3R 30084871 intron sima + chr3R 30085627 intron sima + chr3R 30086383 intron sima + chr3R_4_30085001 chr3R_30085001 RAL-850 3402 chr3R 30088564 30088633 chr3R 30088700 30088770 13 136 0.0 6.5 3.2 3.1 206 chr3R 30088564 intron sima + chr3R 30088667 intron sima + chr3R 30088770 intron sima + chr3R_13_30085001 chr3R_30085001 RAL-850 3403 chr3R 16589025 16589028 chr3R 30107555 30107558 4 13518530 31.0 18.0 24.5 0.2 13518533 chr3R 16589025 intergenic not near genes chr3R 23348292 intron DNApol-epsilon + chr3R 30107558 intron sima + chr3R_4_23345001 chr3R_23345001 RAL-850 3404 chr3R 30147804 30147872 chr3R 30147935 30148008 27 134 0.0 7.5 3.8 5.6 204 chr3R 30147804 intron AdoR - chr3R 30147906 intron AdoR - chr3R 30148008 intron AdoR - chr3R_27_30145001 chr3R_30145001 RAL-850 3405 chr3R 30163305 30163375 chr3R 30163440 30163508 22 134 8.0 9.0 8.5 2.3 203 chr3R 30163305 intergenic not near genes chr3R 30163406 intergenic not near genes chr3R 30163508 intergenic not near genes chr3R_22_30160001 chr3R_30160001 RAL-850 3406 chr3R 30170725 30170784 chr3R 30170862 30170921 28 137 9.5 15.0 12.2 2.1 196 chr3R 30170725 intron CG31028 - chr3R 30170823 intron CG31028 - chr3R 30170921 intron CG31028 - chr3R_28_30170001 chr3R_30170001 RAL-850 3407 chr3R 30177695 30177772 chr3R 30177862 30177919 27 165 5.5 7.0 6.2 3.8 224 chr3R 30177695 5` UTR CG1983 - chr3R 30177807 intergenic CG15530 +,CG1983 - chr3R 30177919 5` UTR CG15530 + chr3R_27_30175001 chr3R_30175001 RAL-850 3408 chr3R 30183174 30183230 chr3R 30183333 30183389 16 159 8.5 9.0 8.8 1.6 215 chr3R 30183174 intergenic not near genes chr3R 30183282 intergenic not near genes chr3R 30183389 intergenic CR44262 - chr3R_16_30180001 chr3R_30180001 RAL-850 3409 chr3R 30203341 30203354 chr3R 30203470 30203483 7 129 8.5 8.5 8.5 0.7 142 chr3R 30203341 intergenic CG9743 - chr3R 30203412 intergenic CG9743 - chr3R 30203483 intergenic CG9743 - chr3R_7_30200001 chr3R_30200001 RAL-850 3410 chr3R 30203356 30203385 chr3R 30203469 30203514 6 125 4.5 8.5 6.5 0.8 158 chr3R 30203356 intergenic CG9743 - chr3R 30203435 intergenic CG9743 - chr3R 30203514 intergenic not near genes chr3R_6_30200001 chr3R_30200001 RAL-850 3411 chr3R 30210531 30210674 chr3R 30210674 30210804 9 139 1.0 0.0 0.5 6.0 273 chr3R 30210531 intergenic Anp +,CecA1 + chr3R 30210668 intergenic CecA1 +,Anp + chr3R 30210804 intergenic CecA1 +,Anp + chr3R_9_30210001 chr3R_30210001 RAL-850 3412 chr3R 30224601 30224673 chr3R 30224728 30224801 30 127 9.0 6.5 7.8 3.4 200 chr3R 30224601 intergenic not near genes chr3R 30224701 intergenic not near genes chr3R 30224801 intergenic not near genes chr3R_30_30220001 chr3R_30220001 RAL-850 3413 chr3R 30238711 30238753 chr3R 30239925 30239968 1360 10 1215 13.0 0.0 6.5 1.3 1257 chr3R 30238711 intergenic not near genes chr3R 30239340 intergenic not near genes chr3R 30239968 intergenic not near genes chr3R_10_30235001 chr3R_30235001 RAL-850 3414 chr3R 30252507 30252520 chr3R 30252709 30252713 10 200 32.0 22.5 27.2 0.4 206 chr3R 30252507 exon CG9682 + chr3R 30252610 exon CG9682 + chr3R 30252713 exon CG9682 + chr3R_10_30250001 chr3R_30250001 RAL-850 3415 chr3R 30252521 30252526 chr3R 30252706 30252728 8 197 31.0 21.0 26.0 0.3 207 chr3R 30252521 exon CG9682 + chr3R 30252624 exon CG9682 + chr3R 30252728 exon CG9682 + chr3R_8_30250001 chr3R_30250001 RAL-850 3416 chr3R 30267931 30267998 chr3R 30268067 30268134 20 133 9.0 11.0 10.0 1.8 203 chr3R 30267931 intergenic not near genes chr3R 30268032 intergenic not near genes chr3R 30268134 intergenic not near genes chr3R_20_30265001 chr3R_30265001 RAL-850 3417 chr3R 30269600 30269666 chr3R 30269733 30269799 28 132 0.0 0.0 0.0 28.0 199 chr3R 30269600 intergenic not near genes chr3R 30269700 intergenic not near genes chr3R 30269799 intergenic not near genes chr3R_28_30265001 chr3R_30265001 RAL-850 3418 chr3R 30287723 30287775 chr3R 30287855 30287908 25 131 9.0 7.5 8.2 2.7 185 chr3R 30287723 intron hdc + chr3R 30287816 intron hdc + chr3R 30287908 intron hdc + chr3R_25_30285001 chr3R_30285001 RAL-850 3419 chr3R 30317293 30317356 chr3R 30324917 30324998 roo 20 7629 1.0 4.0 2.5 5.7 7705 chr3R 30317293 intron hdc + chr3R 30321146 intron hdc + chr3R 30324998 intron hdc + chr3R_20_30320001 chr3R_30320001 RAL-850 3420 chr3R 30330450 30330519 chr3R 30330576 30330649 21 127 6.0 5.0 5.5 3.2 199 chr3R 30330450 intron hdc + chr3R 30330550 intron hdc + chr3R 30330649 intron hdc + chr3R_21_30330001 chr3R_30330001 RAL-850 3421 chr3R 30332404 30332484 chr3R 30332533 30332614 16 127 5.5 6.0 5.8 2.4 210 chr3R 30332404 intron hdc + chr3R 30332509 intron hdc + chr3R 30332614 intron hdc + chr3R_16_30330001 chr3R_30330001 RAL-850 3422 chr3R 30346999 30347033 chr3R 30347119 30347160 13 130 9.5 17.5 13.5 0.9 161 chr3R 30346999 intron hdc + chr3R 30347080 intron hdc + chr3R 30347160 intron hdc + chr3R_13_30345001 chr3R_30345001 RAL-850 3423 chr3R 30375495 30375570 chr3R 30383168 30383242 412 8 7673 4.5 6.0 5.2 1.3 7747 chr3R 30375495 intergenic not near genes chr3R 30379368 intergenic not near genes chr3R 30383242 intergenic not near genes chr3R_8_30375001 chr3R_30375001 RAL-850 3424 chr3R 30396177 30396232 chr3R 30404493 30404548 roo 17 8314 7.5 7.0 7.2 2.1 8371 chr3R 30396177 intergenic not near genes chr3R 30400362 intergenic not near genes chr3R 30404548 5` UTR CR45570 + chr3R_17_30400001 chr3R_30400001 RAL-850 3425 chr3R 30413010 30413088 chr3R 30413137 30413215 23 124 8.5 7.0 7.8 2.6 205 chr3R 30413010 intergenic not near genes chr3R 30413112 intergenic not near genes chr3R 30413215 intergenic not near genes chr3R_23_30410001 chr3R_30410001 RAL-850 3426 chr3R 30480445 30480505 chr3R 30482949 30483023 jockey 26 2511 9.5 1.0 5.2 4.2 2578 chr3R 30480445 intron PH4alphaEFB + chr3R 30481734 intron PH4alphaEFB + chr3R 30483023 intron PH4alphaEFB + chr3R_26_30480001 chr3R_30480001 RAL-850 3427 chr3R 30485025 30485067 chr3R 30485165 30485207 22 138 6.0 4.0 5.0 3.7 182 chr3R 30485025 intron PH4alphaEFB + chr3R 30485116 intron PH4alphaEFB + chr3R 30485207 intron PH4alphaEFB + chr3R_22_30485001 chr3R_30485001 RAL-850 3428 chr3R 30488074 30488091 chr3R 30488203 30488220 14 129 13.0 0.0 6.5 1.9 146 chr3R 30488074 intergenic Jon99Fii - chr3R 30488147 intergenic Jon99Fii - chr3R 30488220 intergenic Jon99Fii - chr3R_14_30485001 chr3R_30485001 RAL-850 3429 chr3R 30498352 30498427 chr3R 30498614 30498677 14 252 0.0 7.0 3.5 3.1 325 chr3R 30498352 intron PH4alphaNE1 - chr3R 30498514 intron PH4alphaNE1 - chr3R 30498677 intron PH4alphaNE1 - chr3R_14_30495001 chr3R_30495001 RAL-850 3430 chr3R 30548966 30548978 chr3R 30549108 30549120 6 141 15.5 9.0 12.2 0.5 154 chr3R 30548966 intron tmod + chr3R 30549043 intron tmod + chr3R 30549120 intron tmod + chr3R_6_30545001 chr3R_30545001 RAL-850 3431 chr3R 30548988 30549039 chr3R 30549105 30549181 22 141 6.5 8.5 7.5 2.6 193 chr3R 30548988 intron tmod + chr3R 30549084 intron tmod + chr3R 30549181 intron tmod + chr3R_22_30545001 chr3R_30545001 RAL-850 3432 chr3R 30571667 30571715 chr3R 30571797 30571845 13 129 3.5 9.0 6.2 1.8 178 chr3R 30571667 intron tmod + chr3R 30571756 intron tmod + chr3R 30571845 exon tmod + chr3R_13_30570001 chr3R_30570001 RAL-850 3433 chr3R 30591272 30591339 chr3R 30591431 30591491 20 156 1.5 8.5 5.0 3.3 219 chr3R 30591272 intergenic not near genes chr3R 30591382 intergenic not near genes chr3R 30591491 intergenic not near genes chr3R_20_30590001 chr3R_30590001 RAL-850 3434 chr3R 30627561 30627567 chr3R 30627691 30627697 4 130 19.0 15.0 17.0 0.2 136 chr3R 30627561 3` UTR CG2267 - chr3R 30627629 exon CG2267 - chr3R 30627697 exon CG2267 - chr3R_4_30625001 chr3R_30625001 RAL-850 3435 chr3R 30627569 30627628 chr3R 30627689 30627755 28 124 9.0 15.0 12.0 2.2 186 chr3R 30627569 3` UTR CG2267 - chr3R 30627662 exon CG2267 - chr3R 30627755 exon CG2267 - chr3R_28_30625001 chr3R_30625001 RAL-850 3436 chr3R 30634168 30634225 chr3R 30634309 30634366 21 138 6.0 8.5 7.2 2.6 198 chr3R 30634168 intergenic not near genes chr3R 30634267 intergenic not near genes chr3R 30634366 intergenic not near genes chr3R_21_30630001 chr3R_30630001 RAL-850 3437 chr3R 30636357 30636420 chr3R 30636488 30636551 23 128 9.0 9.0 9.0 2.3 194 chr3R 30636357 intergenic not near genes chr3R 30636454 intergenic not near genes chr3R 30636551 intergenic not near genes chr3R_23_30635001 chr3R_30635001 RAL-850 3438 chr3R 30679488 30679551 chr3R 30687007 30687070 blood 30 7518 6.0 10.0 8.0 3.3 7582 chr3R 30679488 intergenic not near genes chr3R 30683279 intergenic not near genes chr3R 30687070 intergenic not near genes chr3R_30_30680001 chr3R_30680001 RAL-850 3439 chr3R 30689753 30689787 chr3R 30689879 30689913 15 126 2.0 9.0 5.5 2.3 160 chr3R 30689753 intergenic not near genes chr3R 30689833 intergenic not near genes chr3R 30689913 intergenic not near genes chr3R_15_30685001 chr3R_30685001 RAL-850 3440 chr3R 30761300 30761331 chr3R 30761432 30761463 15 132 10.0 7.5 8.8 1.5 163 chr3R 30761300 intergenic not near genes chr3R 30761382 intergenic not near genes chr3R 30761463 intergenic not near genes chr3R_15_30760001 chr3R_30760001 RAL-850 3441 chr3R 30855756 30855785 chr3R 30855890 30855923 10 138 7.0 7.5 7.2 1.2 167 chr3R 30855756 intergenic not near genes chr3R 30855840 intergenic not near genes chr3R 30855923 intergenic not near genes chr3R_10_30855001 chr3R_30855001 RAL-850 3442 chr3R 30859362 30859419 chr3R 30859490 30859547 21 126 7.5 7.0 7.2 2.6 185 chr3R 30859362 intergenic not near genes chr3R 30859454 intergenic not near genes chr3R 30859547 intergenic not near genes chr3R_21_30855001 chr3R_30855001 RAL-850 3443 chr3R 30946329 30946414 chr3R 30946475 30946548 13 143 0.0 0.0 0.0 13.0 219 chr3R 30946329 intergenic not near genes chr3R 30946438 intergenic not near genes chr3R 30946548 intergenic not near genes chr3R_13_30945001 chr3R_30945001 RAL-850 3444 chr3R 30973116 30973132 chr3R 30973327 30973343 6 211 8.0 16.0 12.0 0.5 227 chr3R 30973116 intron 5-HT7 - chr3R 30973230 intron 5-HT7 - chr3R 30973343 intron 5-HT7 - chr3R_6_30970001 chr3R_30970001 RAL-850 3445 chr3R 30973133 30973166 chr3R 30973325 30973364 13 208 2.5 15.0 8.8 1.3 231 chr3R 30973133 intron 5-HT7 - chr3R 30973248 intron 5-HT7 - chr3R 30973364 intron 5-HT7 - chr3R_13_30970001 chr3R_30970001 RAL-850 3446 chr3R 30991569 30991588 chr3R 30991703 30991722 5 134 8.5 7.5 8.0 0.6 153 chr3R 30991569 intron 5-HT7 - chr3R 30991646 intron 5-HT7 - chr3R 30991722 intron,3` UTR 5-HT7 -,CG31007 - chr3R_5_30990001 chr3R_30990001 RAL-850 3447 chr3R 31042065 31042137 chr3R 31042202 31042274 33 136 12.0 10.0 11.0 2.8 209 chr3R 31042065 exon CanA1 + chr3R 31042170 intron CanA1 + chr3R 31042274 intron CanA1 + chr3R_33_31040001 chr3R_31040001 RAL-850 3448 chr3R 31069598 31069672 chr3R 31069743 31069817 34 144 8.5 8.5 8.5 3.6 219 chr3R 31069598 intron Sox100B + chr3R 31069708 intron Sox100B + chr3R 31069817 intron Sox100B + chr3R_34_31065001 chr3R_31065001 RAL-850 3449 chr3R 31074191 31074216 chr3R 31081839 31081864 springer 5 7647 16.5 9.5 13.0 0.4 7673 chr3R 31074191 intron Sox100B + chr3R 31078028 intron Sox100B + chr3R 31081864 intron Sox100B + chr3R_5_31075001 chr3R_31075001 RAL-850 3450 chr3R 31074217 31074239 chr3R 31081831 31081887 springer 8 7644 14.0 8.0 11.0 0.7 7670 chr3R 31074217 intron Sox100B + chr3R 31078052 intron Sox100B + chr3R 31081887 intron Sox100B + chr3R_8_31075001 chr3R_31075001 RAL-850 3451 chr3R 31102031 31102068 chr3R 31102163 31102200 18 130 0.0 13.5 6.8 2.3 169 chr3R 31102031 intergenic not near genes chr3R 31102116 intergenic not near genes chr3R 31102200 intergenic not near genes chr3R_18_31100001 chr3R_31100001 RAL-850 3452 chr3R 31270921 31270931 chr3R 31271056 31271066 6 135 6.0 7.0 6.5 0.8 145 chr3R 31270921 intergenic not near genes chr3R 31270994 intergenic not near genes chr3R 31271066 intergenic not near genes chr3R_6_31270001 chr3R_31270001 RAL-850 3453 chr3R 31279340 31279390 chr3R 31285564 31285595 diver 22 6235 12.5 8.0 10.2 2.0 6255 chr3R 31279340 intergenic not near genes chr3R 31282468 intergenic not near genes chr3R 31285595 intergenic not near genes chr3R_22_31280001 chr3R_31280001 RAL-850 3454 chr3R 31413052 31413092 chr3R 31418292 31418316 copia 11 5244 13.0 0.5 6.8 1.4 5264 chr3R 31413052 intron Gprk2 + chr3R 31415684 intron Gprk2 + chr3R 31418316 intron Gprk2 + chr3R_11_31415001 chr3R_31415001 RAL-850 3455 chr3R 31426842 31426906 chr3R 31426984 31427048 24 142 8.0 8.0 8.0 2.7 206 chr3R 31426842 intron Gprk2 + chr3R 31426945 intron Gprk2 + chr3R 31427048 intron Gprk2 + chr3R_24_31425001 chr3R_31425001 RAL-850 3456 chr3R 31435316 31435388 chr3R 31435518 31435590 43 201 12.0 10.5 11.2 3.5 274 chr3R 31435316 intron Gprk2 + chr3R 31435453 intron Gprk2 + chr3R 31435590 intron Gprk2 + chr3R_43_31435001 chr3R_31435001 RAL-850 3457 chr3R 31446035 31446101 chr3R 31446175 31446244 19 138 8.0 8.5 8.2 2.1 209 chr3R 31446035 intron Gprk2 + chr3R 31446140 intron Gprk2 + chr3R 31446244 intron Gprk2 + chr3R_19_31445001 chr3R_31445001 RAL-850 3458 chr3R 31448559 31448631 chr3R 31448679 31448757 27 114 8.0 13.5 10.8 2.3 198 chr3R 31448559 intron Gprk2 + chr3R 31448658 intron Gprk2 + chr3R 31448757 intron Gprk2 + chr3R_27_31445001 chr3R_31445001 RAL-850 3459 chr3R 31516930 31516939 chr3R 31517121 31517126 6 191 28.0 20.5 24.2 0.2 196 chr3R 31516930 intergenic not near genes chr3R 31517028 intergenic not near genes chr3R 31517126 intergenic not near genes chr3R_6_31515001 chr3R_31515001 RAL-850 3460 chr3R 31516940 31516952 chr3R 31517119 31517144 14 190 25.5 19.0 22.2 0.6 204 chr3R 31516940 intergenic not near genes chr3R 31517042 intergenic not near genes chr3R 31517144 intergenic not near genes chr3R_14_31515001 chr3R_31515001 RAL-850 3461 chr3R 31516954 31516992 chr3R 31517116 31517184 24 184 17.5 18.0 17.8 1.3 230 chr3R 31516954 intergenic not near genes chr3R 31517069 intergenic not near genes chr3R 31517184 intergenic not near genes chr3R_24_31515001 chr3R_31515001 RAL-850 3462 chr3R 31530780 31530837 chr3R 31531152 31531201 22 356 7.5 9.0 8.2 2.4 421 chr3R 31530780 intergenic not near genes chr3R 31530990 intergenic not near genes chr3R 31531201 intergenic not near genes chr3R_22_31530001 chr3R_31530001 RAL-850 3463 chr3R 31530838 31530843 chr3R 31531145 31531220 4 348 6.5 7.0 6.8 0.5 382 chr3R 31530838 intergenic not near genes chr3R 31531029 intergenic not near genes chr3R 31531220 intergenic not near genes chr3R_4_31530001 chr3R_31530001 RAL-850 3464 chr3R 31538446 31538513 chr3R 31538574 31538641 31 126 10.0 13.0 11.5 2.5 195 chr3R 31538446 intergenic not near genes chr3R 31538544 intergenic not near genes chr3R 31538641 intergenic not near genes chr3R_31_31535001 chr3R_31535001 RAL-850 3465 chr3R 31610072 31610139 chr3R 31610208 31610275 35 136 4.5 8.5 6.5 4.7 203 chr3R 31610072 intron CycG - chr3R 31610174 intron CycG - chr3R 31610275 intron CycG - chr3R_35_31610001 chr3R_31610001 RAL-850 3466 chr3R 31691491 31691556 chr3R 31696307 31696372 Doc 36 4813 14.5 11.5 13.0 2.6 4881 chr3R 31691491 intergenic not near genes chr3R 31693932 intergenic not near genes chr3R 31696372 intergenic not near genes chr3R_36_31690001 chr3R_31690001 RAL-850 3467 chr3R 31699680 31699752 chr3R 31699811 31699843 32 122 11.0 11.5 11.2 2.6 163 chr3R 31699680 intergenic not near genes chr3R 31699762 intergenic not near genes chr3R 31699843 intergenic not near genes chr3R_32_31695001 chr3R_31695001 RAL-850 3468 chr3R 31705037 31705061 chr3R 31705163 31705188 12 126 12.5 15.0 13.8 0.8 151 chr3R 31705037 3` UTR CR45052 - chr3R 31705112 3` UTR CR45052 - chr3R 31705188 3` UTR CR45052 - chr3R_12_31705001 chr3R_31705001 RAL-850 3469 chr3R 31825047 31825090 chr3R 31830006 31830072 26 4960 63.0 65.0 64.0 0.4 5025 chr3R 31825047 intron RhoGAP100F + chr3R 31827560 intron RhoGAP100F + chr3R 31830072 intron RhoGAP100F + chr3R_26_31825001 chr3R_31825001 RAL-850 3470 chr3R 31856946 31857016 chr3R 31857148 31857185 21 192 12.5 6.5 9.5 2.0 239 chr3R 31856946 intron heph - chr3R 31857066 intron heph - chr3R 31857185 intron heph - chr3R_21_31855001 chr3R_31855001 RAL-850 3471 chr3R 31858704 31858781 chr3R 31858838 31858916 14 128 8.5 6.0 7.2 1.7 212 chr3R 31858704 intron heph - chr3R 31858810 intron heph - chr3R 31858916 intron heph - chr3R_14_31855001 chr3R_31855001 RAL-850 3472 chr3R 31930861 31930930 chr3R 31931010 31931064 29 147 9.0 8.5 8.8 3.0 203 chr3R 31930861 intron heph - chr3R 31930962 intron heph - chr3R 31931064 intron heph - chr3R_29_31930001 chr3R_31930001 RAL-850 3473 chr3R 31953159 31953174 chr3R 31953294 31953309 4 135 3.0 8.5 5.8 0.6 150 chr3R 31953159 intron heph - chr3R 31953234 intron heph - chr3R 31953309 intron heph - chr3R_4_31950001 chr3R_31950001 RAL-850 3474 chr3R 31961295 31961367 chr3R 31961423 31961500 37 122 6.5 10.5 8.5 3.9 205 chr3R 31961295 intron heph - chr3R 31961398 intron heph - chr3R 31961500 intron heph - chr3R_37_31960001 chr3R_31960001 RAL-850 3475 chr3R 31962054 31962077 chr3R 31962387 31962433 13 348 12.0 0.0 6.0 1.9 379 chr3R 31962054 intron heph - chr3R 31962244 intron heph - chr3R 31962433 intron heph - chr3R_13_31960001 chr3R_31960001 RAL-850 3476 chr3R 31976549 31976567 chr3R 31976880 31976898 8 331 0.0 20.5 10.2 0.7 349 chr3R 31976549 intron heph - chr3R 31976724 intron heph - chr3R 31976898 intron heph - chr3R_8_31975001 chr3R_31975001 RAL-850 3477 chr3R 31997949 31998016 chr3R 32005469 32005536 blood 22 7518 6.5 8.0 7.2 2.7 7587 chr3R 31997949 intron heph - chr3R 32001742 intron heph - chr3R 32005536 intron heph - chr3R_22_32000001 chr3R_32000001 RAL-850 3478 chr3R 32043360 32043363 chr3R 32043509 32043527 4 145 52.5 54.0 53.2 0.1 167 chr3R 32043360 intergenic not near genes chr3R 32043444 intergenic not near genes chr3R 32043527 intergenic not near genes chr3R_4_32040001 chr3R_32040001 RAL-850 3479 chr3R 32043354 32043435 chr3R 32043528 32043564 13 140 65.5 48.5 57.0 0.2 210 chr3R 32043354 intergenic not near genes chr3R 32043459 intergenic not near genes chr3R 32043564 intergenic not near genes chr3R_13_32040001 chr3R_32040001 RAL-850 3480 chr4 76458 76508 chr4 81951 82001 I-element 22 5490 8.0 9.0 8.5 2.3 5543 chr4 76458 intron pan + chr4 79230 intron pan + chr4 82001 intron pan + chr4_22_75001 chr4_75001 RAL-850 3481 chr4 264933 265000 chr4 265186 265253 15 253 7.5 7.0 7.2 1.8 320 chr4 264933 exon RhoGAP102A + chr4 265093 3` UTR RhoGAP102A + chr4 265253 3` UTR RhoGAP102A + chr4_15_265001 chr4_265001 RAL-850 3482 chr4 319951 320017 chr4 328177 328243 Stalker2 17 8226 4.5 6.0 5.2 2.7 8292 chr4 319951 3` UTR CG32850 + chr4 324097 intron CG32850 + chr4 328243 3` UTR,3` UTR CG32850 +,PMCA - chr4_17_320001 chr4_320001 RAL-850 3483 chr4 336207 336274 chr4 336424 336491 28 216 5.0 10.0 7.5 3.3 284 chr4 336207 intron PMCA - chr4 336349 intron PMCA - chr4 336491 intron PMCA - chr4_28_335001 chr4_335001 RAL-850 3484 chr4 409181 409224 chr4 409314 409357 11 132 5.0 0.0 2.5 3.1 176 chr4 409181 intergenic not near genes chr4 409269 intergenic not near genes chr4 409357 intergenic not near genes chr4_11_405001 chr4_405001 RAL-850 3485 chr4 498157 498171 chr4 498303 498317 INE-1 10 146 12.5 11.0 11.8 0.8 160 chr4 498157 intergenic not near genes chr4 498237 intergenic not near genes chr4 498317 intergenic not near genes chr4_10_495001 chr4_495001 RAL-850 3486 chr4 662138 662206 chr4 662833 662901 INE-1 22 695 5.5 4.5 5.0 3.7 763 chr4 662138 intron gw - chr4 662520 intron gw - chr4 662901 5` UTR gw - chr4_22_660001 chr4_660001 RAL-850 3487 chr4 671563 671573 chr4 680196 680206 Tirant 9 8633 24.0 14.0 19.0 0.5 8643 chr4 671563 intron CG11360 + chr4 675884 intron CG11360 + chr4 680206 intron CG11360 + chr4_9_675001 chr4_675001 RAL-850 3488 chr4 671574 671626 chr4 680194 680259 Tirant 28 8629 10.0 13.5 11.8 2.2 8685 chr4 671574 intron CG11360 + chr4 675916 intron CG11360 + chr4 680259 intron CG11360 + chr4_28_675001 chr4_675001 RAL-850 3489 chr4 852859 852917 chr4 853273 853331 23 413 5.5 10.5 8.0 2.6 472 chr4 852859 intergenic not near genes chr4 853095 intergenic not near genes chr4 853331 intergenic CG11148 - chr4_23_850001 chr4_850001 RAL-850 3490 chrX 295815 295875 chrX 303485 303540 412 14 7666 3.5 7.0 5.2 2.3 7725 chrX 295815 intron CG3777 + chrX 299678 intron CG3777 + chrX 303540 intron CG3777 + chrX_14_295001 chrX_295001 RAL-850 3491 chrX 318430 318491 chrX 323566 323627 flea 20 5135 9.0 8.5 8.8 2.0 5197 chrX 318430 intron,intron CG3777 +,CG32816 - chrX 321028 intron,intron CG3777 +,CG32816 - chrX 323627 intron,intron CG3777 +,CG32816 - chrX_20_320001 chrX_320001 RAL-850 3492 chrX 325584 325650 chrX 325719 325785 22 133 4.0 6.0 5.0 3.7 201 chrX 325584 intron,intron CG3777 +,CG32816 - chrX 325684 intron,intron CG3777 +,CG32816 - chrX 325785 intron,intron CG3777 +,CG32816 - chrX_22_325001 chrX_325001 RAL-850 3493 chrX 428378 428444 chrX 434613 434679 3S18 26 6235 8.5 8.5 8.5 2.7 6301 chrX 428378 intron CG32816 - chrX 431528 intron CG32816 - chrX 434679 intron CG32816 - chrX_26_430001 chrX_430001 RAL-850 3494 chrX 440952 441025 chrX 441080 441153 31 128 9.5 7.0 8.2 3.4 201 chrX 440952 intron CG32816 - chrX 441052 intron CG32816 - chrX 441153 intron CG32816 - chrX_31_440001 chrX_440001 RAL-850 3495 chrX 450314 450391 chrX 450442 450519 19 128 5.5 6.0 5.8 2.8 205 chrX 450314 intron CG32816 - chrX 450416 intron CG32816 - chrX 450519 intron CG32816 - chrX_19_450001 chrX_450001 RAL-850 3496 chrX 551381 551395 chrX 558993 559007 412 4 7612 17.5 7.0 12.2 0.3 7626 chrX 551381 intron Appl + chrX 555194 intron Appl + chrX 559007 intron Appl + chrX_4_555001 chrX_555001 RAL-850 3497 chrX 551397 551449 chrX 558988 559061 412 27 7605 9.0 7.0 8.0 3.0 7664 chrX 551397 intron Appl + chrX 555229 intron Appl + chrX 559061 intron Appl + chrX_27_555001 chrX_555001 RAL-850 3498 chrX 579036 579089 chrX 579176 579206 19 153 6.5 8.0 7.2 2.3 170 chrX 579036 3` UTR Appl + chrX 579121 intergenic Appl + chrX 579206 intergenic Appl + chrX_19_575001 chrX_575001 RAL-850 3499 chrX 802244 802285 chrX 802371 802392 17 121 18.0 11.0 14.5 1.1 148 chrX 802244 exon CG13359 - chrX 802318 exon CG13359 - chrX 802392 exon CG13359 - chrX_17_800001 chrX_800001 RAL-850 3500 chrX 802286 802318 chrX 802368 802395 9 100 13.0 11.5 12.2 0.7 109 chrX 802286 exon CG13359 - chrX 802340 exon CG13359 - chrX 802395 exon CG13359 - chrX_9_800001 chrX_800001 RAL-850 3501 chrX 812223 812286 chrX 817904 817967 297 18 5678 12.0 9.0 10.5 1.6 5744 chrX 812223 intron CG43867 - chrX 815095 intron CG43867 - chrX 817967 intron CG43867 - chrX_18_815001 chrX_815001 RAL-850 3502 chrX 827569 827623 chrX 835411 835465 roo 26 7842 11.0 10.5 10.8 2.2 7896 chrX 827569 intron CG43867 - chrX 831517 intron CG43867 - chrX 835465 intron CG43867 - chrX_26_830001 chrX_830001 RAL-850 3503 chrX 906658 906677 chrX 908497 908516 S-element 7 1839 15.0 11.0 13.0 0.5 1858 chrX 906658 intron CG43867 - chrX 907587 intron CG43867 - chrX 908516 intron CG43867 - chrX_7_905001 chrX_905001 RAL-850 3504 chrX 906678 906724 chrX 908495 908556 S-element 16 1833 8.5 10.5 9.5 1.5 1878 chrX 906678 intron CG43867 - chrX 907617 intron CG43867 - chrX 908556 intron CG43867 - chrX_16_905001 chrX_905001 RAL-850 3505 chrX 1024401 1024458 chrX 1024533 1024590 27 132 5.0 9.5 7.2 3.3 189 chrX 1024401 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX 1024496 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX 1024590 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX_27_1020001 chrX_1020001 RAL-850 3506 chrX 1033307 1033322 chrX 1040990 1041005 412 8 7683 13.5 6.5 10.0 0.7 7698 chrX 1033307 intron su(w[a]) + chrX 1037156 intron su(w[a]) + chrX 1041005 intron su(w[a]) + chrX_8_1035001 chrX_1035001 RAL-850 3507 chrX 1063714 1063745 chrX 1072557 1072588 roo 6 8843 13.5 8.0 10.8 0.5 8874 chrX 1063714 intron CR44779 + chrX 1068151 intron CR44779 + chrX 1072588 intron CR44779 + chrX_6_1065001 chrX_1065001 RAL-850 3508 chrX 1095270 1095344 chrX 1095402 1095477 25 133 7.5 6.0 6.8 3.2 207 chrX 1095270 intron CG3655 - chrX 1095374 intron CG3655 - chrX 1095477 intron CG3655 - chrX_25_1095001 chrX_1095001 RAL-850 3509 chrX 1129724 1129793 chrX 1129996 1130003 7 255 0.0 0.5 0.2 5.8 279 chrX 1129724 intron CG3655 - chrX 1129864 intron CG3655 - chrX 1130003 intron CG3655 - chrX_7_1125001 chrX_1125001 RAL-850 3510 chrX 1163270 1163322 chrX 1163379 1163450 32 125 6.0 0.5 3.2 7.6 180 chrX 1163270 intergenic CG34320 - chrX 1163360 intergenic CG34320 - chrX 1163450 intergenic CG34320 - chrX_32_1160001 chrX_1160001 RAL-850 3511 chrX 1199994 1200062 chrX 1200122 1200190 32 127 9.0 9.0 9.0 3.2 196 chrX 1199994 intron CG14625 + chrX 1200092 intron CG14625 + chrX 1200190 intron CG14625 + chrX_32_1200001 chrX_1200001 RAL-850 3512 chrX 1253686 1253692 chrX 1253818 1253824 4 132 24.5 7.0 15.8 0.2 138 chrX 1253686 intron Atf3 - chrX 1253755 intron Atf3 - chrX 1253824 intron Atf3 - chrX_4_1250001 chrX_1250001 RAL-850 3513 chrX 1253693 1253762 chrX 1253816 1253894 30 127 10.0 6.5 8.2 3.3 201 chrX 1253693 intron Atf3 - chrX 1253794 intron Atf3 - chrX 1253894 intron Atf3 - chrX_30_1250001 chrX_1250001 RAL-850 3514 chrX 1357732 1357795 chrX 1367952 1368014 Doc 24 10218 8.0 9.5 8.8 2.4 10282 chrX 1357732 intergenic png - chrX 1362873 intergenic not near genes chrX 1368014 intergenic not near genes chrX_24_1360001 chrX_1360001 RAL-850 3515 chrX 1392754 1392824 chrX 1392920 1392990 26 165 10.5 7.0 8.8 2.7 236 chrX 1392754 3` UTR CG32813 + chrX 1392872 intergenic CG32813 +,CG11448 + chrX 1392990 intergenic CG11448 +,CG32813 + chrX_26_1390001 chrX_1390001 RAL-850 3516 chrX 1440070 1440120 chrX 1440205 1440271 24 142 10.0 14.0 12.0 1.8 201 chrX 1440070 exon futsch + chrX 1440170 exon futsch + chrX 1440271 exon futsch + chrX_24_1440001 chrX_1440001 RAL-850 3517 chrX 1518010 1518037 chrX 1523451 1523489 jockey 13 5449 17.5 9.0 13.2 0.9 5479 chrX 1518010 intergenic inc + chrX 1520750 intergenic not near genes chrX 1523489 intergenic not near genes chrX_13_1520001 chrX_1520001 RAL-850 3518 chrX 1518041 1518065 chrX 1523440 1523505 jockey 9 5441 8.0 8.0 8.0 1.0 5464 chrX 1518041 intergenic inc + chrX 1520773 intergenic not near genes chrX 1523505 intergenic not near genes chrX_9_1520001 chrX_1520001 RAL-850 3519 chrX 1930494 1930560 chrX 1938115 1938181 opus 28 7621 8.0 7.0 7.5 3.3 7687 chrX 1930494 3` UTR CG11596 + chrX 1934338 intergenic not near genes chrX 1938181 3` UTR CG3857 - chrX_28_1930001 chrX_1930001 RAL-850 3520 chrX 1954845 1954915 chrX 1962829 1962883 Stalker2 19 7974 6.0 3.0 4.5 3.5 8038 chrX 1954845 intron Hr4 + chrX 1958864 intron Hr4 + chrX 1962883 intron Hr4 + chrX_19_1955001 chrX_1955001 RAL-850 3521 chrX 2009448 2009499 chrX 2009589 2009622 15 140 6.0 4.0 5.0 2.5 174 chrX 2009448 intergenic CG4406 - chrX 2009535 intergenic CG4406 -,CR45478 + chrX 2009622 intergenic CG4406 -,CR45478 + chrX_15_2005001 chrX_2005001 RAL-850 3522 chrX 2023090 2023108 chrX 2023927 2023945 6 837 36.0 25.5 30.8 0.2 855 chrX 2023090 3` UTR east + chrX 2023518 3` UTR east + chrX 2023945 3` UTR,3` UTR east +,Actn - chrX_6_2020001 chrX_2020001 RAL-850 3523 chrX 2023928 2023979 chrX 2024085 2024152 21 171 30.0 41.0 35.5 0.6 224 chrX 2023928 3` UTR,3` UTR east +,Actn - chrX 2024040 3` UTR,3` UTR east +,Actn - chrX 2024152 3` UTR,3` UTR east +,Actn - chrX_21_2020001 chrX_2020001 RAL-850 3524 chrX 2020874 2020892 chrX 2025558 2025573 8 4678 44.5 35.5 40.0 0.2 4699 chrX 2020874 exon east + chrX 2023224 3` UTR east + chrX 2025573 exon Actn - chrX_8_2020001 chrX_2020001 RAL-850 3525 chrX 2020872 2020921 chrX 2025578 2025610 4 4684 51.5 32.0 41.8 0.1 4738 chrX 2020872 exon east + chrX 2023241 3` UTR east + chrX 2025610 exon Actn - chrX_4_2020001 chrX_2020001 RAL-850 3526 chrX 2069331 2069342 chrX 2069481 2069492 5 150 16.5 9.5 13.0 0.4 161 chrX 2069331 intron,exon CG4199 -,CG4194 + chrX 2069412 intron,3` UTR CG4199 -,CG4194 + chrX 2069492 intron,3` UTR CG4199 -,CG4194 + chrX_5_2065001 chrX_2065001 RAL-850 3527 chrX 2069355 2069393 chrX 2069479 2069543 19 149 6.5 9.5 8.0 2.1 188 chrX 2069355 intron,exon CG4199 -,CG4194 + chrX 2069449 intron,3` UTR CG4199 -,CG4194 + chrX 2069543 intron,3` UTR CG4199 -,CG4194 + chrX_19_2065001 chrX_2065001 RAL-850 3528 chrX 2308796 2308818 chrX 2317429 2317451 Tirant 5 8632 11.0 18.5 14.8 0.3 8655 chrX 2308796 intron phl + chrX 2313124 intron phl + chrX 2317451 intron phl + chrX_5_2310001 chrX_2310001 RAL-850 3529 chrX 2399807 2399810 chrX 2408197 2408213 roo 5 8396 24.0 1.5 12.8 0.4 8406 chrX 2399807 intergenic not near genes chrX 2404010 intergenic not near genes chrX 2408213 intergenic not near genes chrX_5_2400001 chrX_2400001 RAL-850 3530 chrX 2399812 2399823 chrX 2408192 2408195 roo 5 8383 22.5 0.0 11.2 0.4 8383 chrX 2399812 intergenic not near genes chrX 2404004 intergenic not near genes chrX 2408195 intergenic not near genes chrX_5_2400001 chrX_2400001 RAL-850 3531 chrX 2399825 2399866 chrX 2408188 2408251 roo 14 8366 12.5 0.0 6.2 1.9 8426 chrX 2399825 intergenic not near genes chrX 2404038 intergenic not near genes chrX 2408251 intergenic not near genes chrX_14_2400001 chrX_2400001 RAL-850 3532 chrX 2429609 2429668 chrX 2429740 2429799 18 131 0.0 6.0 3.0 4.5 190 chrX 2429609 intergenic not near genes chrX 2429704 intergenic not near genes chrX 2429799 intergenic not near genes chrX_18_2425001 chrX_2425001 RAL-850 3533 chrX 2482721 2482740 chrX 2482849 2482868 7 128 13.5 11.0 12.2 0.5 147 chrX 2482721 intron trol - chrX 2482794 intron trol - chrX 2482868 intron trol - chrX_7_2480001 chrX_2480001 RAL-850 3534 chrX 2578768 2578782 chrX 2578910 2578924 10 142 1.5 8.5 5.0 1.7 156 chrX 2578768 intergenic Pdfr +,Vha36-3 - chrX 2578846 intergenic Pdfr +,Vha36-3 - chrX 2578924 intergenic Vha36-3 -,Pdfr + chrX_10_2575001 chrX_2575001 RAL-850 3535 chrX 2578792 2578839 chrX 2578906 2578981 21 135 1.0 7.5 4.2 4.0 189 chrX 2578792 intergenic Pdfr +,Vha36-3 - chrX 2578886 intergenic Vha36-3 -,Pdfr + chrX 2578981 intergenic Vha36-3 -,Pdfr + chrX_21_2575001 chrX_2575001 RAL-850 3536 chrX 2664348 2664412 chrX 2665544 2665598 1360 30 1195 9.0 4.5 6.8 3.8 1250 chrX 2664348 intron sgg + chrX 2664973 intron sgg + chrX 2665598 intron sgg + chrX_30_2660001 chrX_2660001 RAL-850 3537 chrX 2801148 2801211 chrX 2801499 2801555 15 348 8.0 0.5 4.2 2.9 407 chrX 2801148 intron kirre + chrX 2801352 intron kirre + chrX 2801555 intron kirre + chrX_15_2800001 chrX_2800001 RAL-850 3538 chrX 2803455 2803499 chrX 2803648 2803682 22 191 7.0 0.0 3.5 4.9 227 chrX 2803455 intron kirre + chrX 2803568 intron kirre + chrX 2803682 intron kirre + chrX_22_2800001 chrX_2800001 RAL-850 3539 chrX 2823755 2823771 chrX 2832353 2832369 roo 5 8598 14.5 15.0 14.8 0.3 8614 chrX 2823755 intron kirre + chrX 2828062 intron kirre + chrX 2832369 intron kirre + chrX_5_2825001 chrX_2825001 RAL-850 3540 chrX 2844859 2844923 chrX 2852319 2852383 mdg1 25 7460 4.0 7.0 5.5 3.8 7524 chrX 2844859 intron kirre + chrX 2848621 intron kirre + chrX 2852383 intron kirre + chrX_25_2845001 chrX_2845001 RAL-850 3541 chrX 2879029 2879051 chrX 2879131 2879164 10 125 4.5 8.0 6.2 1.4 135 chrX 2879029 intron kirre + chrX 2879096 intron kirre + chrX 2879164 intron kirre + chrX_10_2875001 chrX_2875001 RAL-850 3542 chrX 2888072 2888140 chrX 2888200 2888268 31 125 9.5 8.5 9.0 3.1 196 chrX 2888072 intron kirre + chrX 2888170 intron kirre + chrX 2888268 intron kirre + chrX_31_2885001 chrX_2885001 RAL-850 3543 chrX 3031116 3031189 chrX 3031247 3031322 10 133 3.0 7.5 5.2 1.6 206 chrX 3031116 intron kirre + chrX 3031219 intron kirre + chrX 3031322 intron kirre + chrX_10_3030001 chrX_3030001 RAL-850 3544 chrX 3057979 3058042 chrX 3058270 3058333 pogo 19 291 7.0 5.0 6.0 2.7 354 chrX 3057979 intron kirre + chrX 3058156 intron kirre + chrX 3058333 intron kirre + chrX_19_3055001 chrX_3055001 RAL-850 3545 chrX 3075580 3075612 chrX 3080941 3080973 Transpac 6 5361 11.0 2.0 6.5 0.8 5393 chrX 3075580 intron kirre + chrX 3078276 intron kirre + chrX 3080973 intron kirre + chrX_6_3075001 chrX_3075001 RAL-850 3546 chrX 3107712 3107737 chrX 3107851 3107876 7 139 1.0 7.0 4.0 1.4 164 chrX 3107712 intron kirre + chrX 3107794 intron kirre + chrX 3107876 intron kirre + chrX_7_3105001 chrX_3105001 RAL-850 3547 chrX 3107749 3107778 chrX 3107843 3107888 7 121 0.5 5.5 3.0 1.8 139 chrX 3107749 intron kirre + chrX 3107818 intron kirre + chrX 3107888 intron kirre + chrX_7_3105001 chrX_3105001 RAL-850 3548 chrX 3126124 3126172 chrX 3126251 3126299 15 125 7.5 16.5 12.0 1.2 175 chrX 3126124 intron kirre + chrX 3126212 intron kirre + chrX 3126299 intron kirre + chrX_15_3125001 chrX_3125001 RAL-850 3549 chrX 3203418 3203484 chrX 3203667 3203733 23 247 7.5 9.0 8.2 2.5 315 chrX 3203418 intron dnc + chrX 3203576 intron dnc + chrX 3203733 intron dnc + chrX_23_3200001 chrX_3200001 RAL-850 3550 chrX 3206436 3206489 chrX 3206565 3206618 10 126 6.5 7.5 7.0 1.2 182 chrX 3206436 intron dnc + chrX 3206527 intron dnc + chrX 3206618 intron dnc + chrX_10_3205001 chrX_3205001 RAL-850 3551 chrX 3218486 3218526 chrX 3227685 3227725 roo 5 9199 1.5 6.0 3.8 1.0 9239 chrX 3218486 intron dnc + chrX 3223106 intron dnc + chrX 3227725 intron dnc + chrX_5_3220001 chrX_3220001 RAL-850 3552 chrX 3306026 3306310 chrX 3306184 3306442 28 149 16.0 9.0 12.5 2.1 416 chrX 3306026 intron dnc + chrX 3306234 intron dnc + chrX 3306442 intron dnc + chrX_28_3305001 chrX_3305001 RAL-850 3553 chrX 3306339 3306373 chrX 3306471 3306505 10 132 2.5 0.0 1.2 4.5 166 chrX 3306339 intron dnc + chrX 3306422 intron dnc + chrX 3306505 intron dnc + chrX_10_3305001 chrX_3305001 RAL-850 3554 chrX 3351754 3351808 chrX 3351890 3351943 12 125 9.0 13.0 11.0 1.0 189 chrX 3351754 intergenic not near genes chrX 3351848 intergenic not near genes chrX 3351943 intergenic not near genes chrX_12_3350001 chrX_3350001 RAL-850 3555 chrX 3352726 3352748 chrX 3352865 3352887 5 139 12.5 6.5 9.5 0.5 161 chrX 3352726 intergenic not near genes chrX 3352806 intergenic not near genes chrX 3352887 intergenic not near genes chrX_5_3350001 chrX_3350001 RAL-850 3556 chrX 3398092 3398378 chrX 3398223 3398506 55 129 3.0 14.0 8.5 5.8 414 chrX 3398092 intron,intron CR44999 +,CG12535 - chrX 3398299 intron,intron CR44999 +,CG12535 - chrX 3398506 intron,intron CR44999 +,CG12535 - chrX_55_3395001 chrX_3395001 RAL-850 3557 chrX 3408934 3409012 chrX 3409061 3409137 28 127 5.5 5.5 5.5 4.3 203 chrX 3408934 intron,intron CR44999 +,CG12535 - chrX 3409036 intron,intron CR44999 +,CG12535 - chrX 3409137 intron,intron CR44999 +,CG12535 - chrX_28_3405001 chrX_3405001 RAL-850 3558 chrX 3414291 3414352 chrX 3414468 3414529 7 174 4.5 0.5 2.5 2.0 238 chrX 3414291 intron,intron CR44999 +,CG12535 - chrX 3414410 intron,intron CR44999 +,CG12535 - chrX 3414529 intron,intron CR44999 +,CG12535 - chrX_7_3410001 chrX_3410001 RAL-850 3559 chrX 3414977 3415011 chrX 3421212 3421236 3S18 5 6231 6.0 4.5 5.2 0.8 6259 chrX 3414977 intron,intron CR44999 +,CG12535 - chrX 3418106 intron,intron CR44999 +,CG12535 - chrX 3421236 intron,intron CR44999 +,CG12535 - chrX_5_3415001 chrX_3415001 RAL-850 3560 chrX 3415012 3415043 chrX 3421201 3421278 3S18 8 6229 2.5 3.5 3.0 2.0 6266 chrX 3415012 intron,intron CR44999 +,CG12535 - chrX 3418145 intron,intron CR44999 +,CG12535 - chrX 3421278 intron,intron CR44999 +,CG12535 - chrX_8_3415001 chrX_3415001 RAL-850 3561 chrX 3465757 3465767 chrX 3465891 3465901 4 134 5.5 4.0 4.8 0.7 144 chrX 3465757 intron,3` UTR CR44999 +,CG12206 - chrX 3465829 intron,3` UTR CR44999 +,CG12206 - chrX 3465901 intron,3` UTR CR44999 +,CG12206 - chrX_4_3465001 chrX_3465001 RAL-850 3562 chrX 3493054 3493115 chrX 3502258 3502324 roo 12 9205 6.5 2.0 4.2 2.3 9270 chrX 3493054 intron,intron CR44999 +,Gas8 - chrX 3497689 intron,intron CR44999 +,Gas8 - chrX 3502324 intron,intron CR44999 +,Gas8 - chrX_12_3495001 chrX_3495001 RAL-850 3563 chrX 3589454 3589510 chrX 3589592 3589648 14 137 0.5 5.0 2.8 3.7 194 chrX 3589454 intron AstA-R1 + chrX 3589551 intron AstA-R1 + chrX 3589648 intron AstA-R1 + chrX_14_3585001 chrX_3585001 RAL-850 3564 chrX 3597514 3597574 chrX 3619731 3619792 roo 23 22216 13.5 17.5 15.5 1.4 22278 chrX 3597514 intron AstA-R1 + chrX 3608653 intron AstA-R1 + chrX 3619792 intron AstA-R1 + chrX_23_3605001 chrX_3605001 RAL-850 3565 chrX 3621773 3621780 chrX 3621945 3621948 7 172 0.0 11.5 5.8 1.0 175 chrX 3621773 intron AstA-R1 + chrX 3621860 intron AstA-R1 + chrX 3621948 intron AstA-R1 + chrX_7_3620001 chrX_3620001 RAL-850 3566 chrX 3726726 3726776 chrX 3730173 3730223 NOF 12 3446 5.0 8.5 6.8 1.5 3497 chrX 3726726 intron tlk + chrX 3728474 intron tlk + chrX 3730223 intron tlk + chrX_12_3725001 chrX_3725001 RAL-850 3567 chrX 3842308 3842352 chrX 3842576 3842619 pogo 20 268 7.5 5.0 6.2 2.8 311 chrX 3842308 intron ec + chrX 3842464 intron ec + chrX 3842619 intron ec + chrX_20_3840001 chrX_3840001 RAL-850 3568 chrX 3866056 3866112 chrX 3866184 3866230 21 126 9.0 10.5 9.8 1.9 174 chrX 3866056 intron yin - chrX 3866143 intron yin - chrX 3866230 intron yin - chrX_21_3865001 chrX_3865001 RAL-850 3569 chrX 3888458 3888497 chrX 3888586 3888625 16 126 0.0 5.5 2.8 4.2 167 chrX 3888458 intron CG15239 + chrX 3888542 intron CG15239 + chrX 3888625 intron CG15239 + chrX_16_3885001 chrX_3885001 RAL-850 3570 chrX 3922079 3922148 chrX 3922400 3922472 17 322 5.0 10.0 7.5 2.0 393 chrX 3922079 intron CG42541 - chrX 3922276 intron CG42541 - chrX 3922472 intron CG42541 - chrX_17_3920001 chrX_3920001 RAL-850 3571 chrX 3986831 3986839 chrX 3994514 3994522 412 5 7683 18.0 13.5 15.8 0.3 7691 chrX 3986831 intergenic not near genes chrX 3990676 intergenic not near genes chrX 3994522 intergenic not near genes chrX_5_3990001 chrX_3990001 RAL-850 3572 chrX 3986840 3986893 chrX 3994511 3994574 412 20 7682 7.0 13.0 10.0 1.8 7734 chrX 3986840 intergenic not near genes chrX 3990707 intergenic not near genes chrX 3994574 intergenic not near genes chrX_20_3990001 chrX_3990001 RAL-850 3573 chrX 4048461 4048525 chrX 4048587 4048651 25 126 8.0 10.5 9.2 2.5 190 chrX 4048461 3` UTR CR45482 - chrX 4048556 3` UTR CR45482 - chrX 4048651 3` UTR CR45482 - chrX_25_4045001 chrX_4045001 RAL-850 3574 chrX 4115165 4115239 chrX 4115294 4115330 28 125 10.5 9.0 9.8 2.6 165 chrX 4115165 exon Tip60 - chrX 4115248 intron Tip60 - chrX 4115330 exon Tip60 - chrX_28_4115001 chrX_4115001 RAL-850 3575 chrX 4132619 4132695 chrX 4132837 4132913 24 218 9.0 8.0 8.5 2.5 294 chrX 4132619 3` UTR GlcAT-I + chrX 4132766 3` UTR GlcAT-I + chrX 4132913 3` UTR Fas2 - chrX_24_4130001 chrX_4130001 RAL-850 3576 chrX 4152341 4152377 chrX 4152468 4152491 15 122 8.5 11.0 9.8 1.4 150 chrX 4152341 intron Fas2 - chrX 4152416 intron Fas2 - chrX 4152491 intron Fas2 - chrX_15_4150001 chrX_4150001 RAL-850 3577 chrX 4155020 4155035 chrX 4155208 4155226 8 193 8.0 6.5 7.2 1.0 206 chrX 4155020 intron Fas2 - chrX 4155123 intron Fas2 - chrX 4155226 intron Fas2 - chrX_8_4155001 chrX_4155001 RAL-850 3578 chrX 4155038 4155057 chrX 4155198 4155224 5 183 5.0 6.5 5.8 0.7 186 chrX 4155038 intron Fas2 - chrX 4155131 intron Fas2 - chrX 4155224 intron Fas2 - chrX_5_4155001 chrX_4155001 RAL-850 3579 chrX 4157849 4157920 chrX 4164952 4165022 297 16 7101 3.5 7.0 5.2 2.6 7173 chrX 4157849 intron Fas2 - chrX 4161436 intron Fas2 - chrX 4165022 intron Fas2 - chrX_16_4160001 chrX_4160001 RAL-850 3580 chrX 4216290 4216338 chrX 4216419 4216461 13 128 11.5 9.5 10.5 1.1 171 chrX 4216290 intergenic not near genes chrX 4216376 intergenic CG15571 - chrX 4216461 intergenic CG15571 - chrX_13_4215001 chrX_4215001 RAL-850 3581 chrX 4324345 4324410 chrX 4324472 4324536 15 124 4.0 8.0 6.0 2.1 191 chrX 4324345 intron norpA + chrX 4324440 intron norpA + chrX 4324536 intron norpA + chrX_15_4320001 chrX_4320001 RAL-850 3582 chrX 4343832 4343890 chrX 4343997 4344054 16 165 2.0 3.5 2.8 4.2 222 chrX 4343832 intron norpA + chrX 4343943 intron norpA + chrX 4344054 intron norpA + chrX_16_4340001 chrX_4340001 RAL-850 3583 chrX 4396933 4396997 chrX 4397068 4397132 22 132 7.0 7.0 7.0 2.8 199 chrX 4396933 intron CR32773 - chrX 4397032 intron CR32773 - chrX 4397132 intron CR32773 - chrX_22_4395001 chrX_4395001 RAL-850 3584 chrX 4436461 4436496 chrX 4436592 4436629 13 126 7.0 12.0 9.5 1.2 168 chrX 4436461 intron,intron CR32773 -,bi + chrX 4436545 intron,intron CR32773 -,bi + chrX 4436629 intron,intron CR32773 -,bi + chrX_13_4435001 chrX_4435001 RAL-850 3585 chrX 4613523 4613569 chrX 4613644 4613709 20 133 8.0 7.0 7.5 2.4 186 chrX 4613523 intergenic not near genes chrX 4613616 intergenic not near genes chrX 4613709 intergenic not near genes chrX_20_4610001 chrX_4610001 RAL-850 3586 chrX 4700349 4700369 chrX 4700742 4700762 jockey 10 392 15.5 7.5 11.5 0.8 413 chrX 4700349 3` UTR ctp + chrX 4700556 3` UTR ctp + chrX 4700762 3` UTR ctp + chrX_10_4700001 chrX_4700001 RAL-850 3587 chrX 4700370 4700417 chrX 4700736 4700810 jockey 18 390 8.0 7.0 7.5 2.1 440 chrX 4700370 3` UTR ctp + chrX 4700590 3` UTR ctp + chrX 4700810 3` UTR ctp + chrX_18_4700001 chrX_4700001 RAL-850 3588 chrX 4710033 4710106 chrX 4710193 4710266 12 156 7.5 6.5 7.0 1.5 233 chrX 4710033 intron Proc-R + chrX 4710150 intron Proc-R + chrX 4710266 intron Proc-R + chrX_12_4710001 chrX_4710001 RAL-850 3589 chrX 4723532 4723583 chrX 4723662 4723691 22 124 10.5 16.5 13.5 1.5 159 chrX 4723532 exon Proc-R + chrX 4723612 intron Proc-R + chrX 4723691 intron Proc-R + chrX_22_4720001 chrX_4720001 RAL-850 3590 chrX 4731781 4731782 chrX 4736917 4736925 jockey 5 5141 15.5 12.0 13.8 0.3 5144 chrX 4731781 intergenic not near genes chrX 4734353 intergenic not near genes chrX 4736925 intergenic not near genes chrX_5_4730001 chrX_4730001 RAL-850 3591 chrX 4738986 4739049 chrX 4739244 4739305 8 256 6.5 2.5 4.5 1.5 319 chrX 4738986 intergenic not near genes chrX 4739146 intergenic not near genes chrX 4739305 intergenic not near genes chrX_8_4735001 chrX_4735001 RAL-850 3592 chrX 4744106 4744156 chrX 4744254 4744302 7 143 8.0 3.0 5.5 1.1 196 chrX 4744106 intergenic not near genes chrX 4744204 intergenic not near genes chrX 4744302 intergenic not near genes chrX_7_4740001 chrX_4740001 RAL-850 3593 chrX 4744751 4744827 chrX 4744886 4744962 14 134 6.0 5.5 5.8 2.1 211 chrX 4744751 intergenic not near genes chrX 4744856 intergenic not near genes chrX 4744962 intergenic not near genes chrX_14_4740001 chrX_4740001 RAL-850 3594 chrX 4763216 4763277 chrX 4763754 4763804 Stalker4 15 536 7.5 12.0 9.8 1.4 588 chrX 4763216 intergenic not near genes chrX 4763510 intergenic not near genes chrX 4763804 intergenic not near genes chrX_15_4760001 chrX_4760001 RAL-850 3595 chrX 4792332 4792393 chrX 4792815 4792876 jockey 21 479 7.5 8.5 8.0 2.3 544 chrX 4792332 intergenic not near genes chrX 4792604 intergenic not near genes chrX 4792876 intergenic not near genes chrX_21_4790001 chrX_4790001 RAL-850 3596 chrX 4815024 4815035 chrX 4815179 4815190 4 155 0.0 9.5 4.8 0.7 166 chrX 4815024 intergenic not near genes chrX 4815107 intergenic not near genes chrX 4815190 intergenic not near genes chrX_4_4815001 chrX_4815001 RAL-850 3597 chrX 4827928 4827954 chrX 4835349 4835370 Stalker4 8 7420 15.5 8.0 11.8 0.6 7442 chrX 4827928 intergenic not near genes chrX 4831649 intergenic not near genes chrX 4835370 intergenic not near genes chrX_8_4830001 chrX_4830001 RAL-850 3598 chrX 4827956 4827996 chrX 4835337 4835351 Stalker4 20 7392 9.5 6.0 7.8 2.3 7395 chrX 4827956 intergenic not near genes chrX 4831654 intergenic not near genes chrX 4835351 intergenic not near genes chrX_20_4830001 chrX_4830001 RAL-850 3599 chrX 4869671 4869688 chrX 4869819 4869855 5 161 15.5 12.0 13.8 0.3 184 chrX 4869671 intron CG42594 + chrX 4869763 intron CG42594 + chrX 4869855 intron CG42594 + chrX_5_4865001 chrX_4865001 RAL-850 3600 chrX 4990004 4990062 chrX 4997268 4997326 roo 15 7264 8.0 8.5 8.2 1.6 7322 chrX 4990004 intron CR44833 - chrX 4993665 intron CR44833 - chrX 4997326 intron CR44833 - chrX_15_4990001 chrX_4990001 RAL-850 3601 chrX 5096246 5096300 chrX 5103841 5103915 springer 19 7610 8.0 6.5 7.2 2.3 7669 chrX 5096246 intron,intron CG15465 +,rg + chrX 5100080 intron,intron CG15465 +,rg + chrX 5103915 intron,intron CG15465 +,rg + chrX_19_5100001 chrX_5100001 RAL-850 3602 chrX 5120615 5120662 chrX 5120768 5120827 11 151 3.5 5.5 4.5 2.0 212 chrX 5120615 intron,intron CG15465 +,rg + chrX 5120721 intron,intron CG15465 +,rg + chrX 5120827 intron,intron CG15465 +,rg + chrX_11_5120001 chrX_5120001 RAL-850 3603 chrX 5131360 5131371 chrX 5131491 5131494 8 130 13.5 10.0 11.8 0.6 134 chrX 5131360 intron,intron CG15465 +,rg + chrX 5131427 intron,intron CG15465 +,rg + chrX 5131494 intron,intron CG15465 +,rg + chrX_8_5130001 chrX_5130001 RAL-850 3604 chrX 5131374 5131389 chrX 5131488 5131514 5 121 13.5 9.5 11.5 0.4 140 chrX 5131374 intron,intron CG15465 +,rg + chrX 5131444 intron,intron CG15465 +,rg + chrX 5131514 intron,intron CG15465 +,rg + chrX_5_5130001 chrX_5130001 RAL-850 3605 chrX 5131390 5131431 chrX 5131483 5131532 17 115 8.5 8.5 8.5 1.8 142 chrX 5131390 intron,intron CG15465 +,rg + chrX 5131461 intron,intron CG15465 +,rg + chrX 5131532 intron,intron CG15465 +,rg + chrX_17_5130001 chrX_5130001 RAL-850 3606 chrX 5134798 5134821 chrX 5134933 5134972 14 149 13.5 15.0 14.2 0.9 174 chrX 5134798 intron,intron CG15465 +,rg + chrX 5134885 intron,intron CG15465 +,rg + chrX 5134972 intron,intron CG15465 +,rg + chrX_14_5130001 chrX_5130001 RAL-850 3607 chrX 5220347 5220402 chrX 5220633 5220654 4 280 7.0 7.5 7.2 0.5 307 chrX 5220347 intron,intron CG15465 +,rg + chrX 5220500 intron,intron CG15465 +,rg + chrX 5220654 intron,intron CG15465 +,rg + chrX_4_5220001 chrX_5220001 RAL-850 3608 chrX 5291459 5291509 chrX 5291592 5291642 10 131 10.0 9.5 9.8 0.9 183 chrX 5291459 intergenic not near genes chrX 5291550 intergenic not near genes chrX 5291642 intergenic not near genes chrX_10_5290001 chrX_5290001 RAL-850 3609 chrX 5323072 5323085 chrX 5323399 5323412 4 327 1.0 0.0 0.5 2.7 340 chrX 5323072 intergenic Rnp4F - chrX 5323242 intergenic not near genes chrX 5323412 intergenic Mcm3 + chrX_4_5320001 chrX_5320001 RAL-850 3610 chrX 5338661 5338730 chrX 5339964 5339993 jockey 12 1298 7.0 4.0 5.5 1.8 1332 chrX 5338661 intergenic not near genes chrX 5339327 intergenic not near genes chrX 5339993 intergenic SK + chrX_12_5335001 chrX_5335001 RAL-850 3611 chrX 5349235 5349305 chrX 5349361 5349432 32 126 5.0 9.5 7.2 3.9 197 chrX 5349235 intron SK + chrX 5349334 intron SK + chrX 5349432 intron SK + chrX_32_5345001 chrX_5345001 RAL-850 3612 chrX 5480502 5480563 chrX 5480630 5480691 34 127 6.0 7.0 6.5 4.5 189 chrX 5480502 intron SPR + chrX 5480596 intron SPR + chrX 5480691 intron SPR + chrX_34_5480001 chrX_5480001 RAL-850 3613 chrX 5487460 5487519 chrX 5487766 5487825 21 304 7.5 12.0 9.8 1.9 365 chrX 5487460 intron SPR + chrX 5487642 intron SPR + chrX 5487825 intron SPR + chrX_21_5485001 chrX_5485001 RAL-850 3614 chrX 5512005 5512086 chrX 5512138 5512223 19 136 5.0 0.0 2.5 5.4 218 chrX 5512005 intergenic not near genes chrX 5512114 intergenic not near genes chrX 5512223 intergenic not near genes chrX_19_5510001 chrX_5510001 RAL-850 3615 chrX 5524803 5524827 chrX 5528716 5528740 412 13 3913 12.0 2.0 7.0 1.6 3937 chrX 5524803 intergenic snoRNA:Psi28S-3342 - chrX 5526772 intergenic not near genes chrX 5528740 intergenic Vsx2 - chrX_13_5525001 chrX_5525001 RAL-850 3616 chrX 5566714 5566786 chrX 5566853 5566892 11 116 1.5 8.5 5.0 1.8 178 chrX 5566714 intergenic not near genes chrX 5566803 intergenic not near genes chrX 5566892 intergenic not near genes chrX_11_5565001 chrX_5565001 RAL-850 3617 chrX 5714108 5714183 chrX 5714235 5714309 33 126 6.5 8.0 7.2 4.0 201 chrX 5714108 intron CG33080 - chrX 5714208 intron CG33080 - chrX 5714309 intron CG33080 - chrX_33_5710001 chrX_5710001 RAL-850 3618 chrX 5726208 5726280 chrX 5726602 5726672 15 393 4.5 3.0 3.8 3.1 464 chrX 5726208 intron CG32758 - chrX 5726440 intron CG32758 - chrX 5726672 intron CG32758 - chrX_15_5725001 chrX_5725001 RAL-850 3619 chrX 5727376 5727412 chrX 5732165 5732201 Doc 12 4788 9.5 7.5 8.5 1.3 4825 chrX 5727376 intron CG32758 - chrX 5729788 intron CG32758 - chrX 5732201 intron CG32758 - chrX_12_5725001 chrX_5725001 RAL-850 3620 chrX 5804982 5804994 chrX 5805141 5805168 5 166 49.0 53.5 51.2 0.1 186 chrX 5804982 exon Cpr5C + chrX 5805075 exon Cpr5C + chrX 5805168 exon Cpr5C + chrX_5_5805001 chrX_5805001 RAL-850 3621 chrX 5804970 5805009 chrX 5805186 5805208 8 195 50.5 50.5 50.5 0.2 238 chrX 5804970 exon Cpr5C + chrX 5805089 exon Cpr5C + chrX 5805208 exon Cpr5C + chrX_8_5805001 chrX_5805001 RAL-850 3622 chrX 5883610 5883780 chrX 5883772 5884071 27 195 0.0 0.0 0.0 27.0 461 chrX 5883610 intron CR45668 - chrX 5883840 intron CR45668 - chrX 5884071 intron CR45668 - chrX_27_5880001 chrX_5880001 RAL-850 3623 chrX 5883784 5883808 chrX 5884075 5884099 pogo 10 291 0.0 10.0 5.0 1.7 315 chrX 5883784 intron CR45668 - chrX 5883942 intron CR45668 - chrX 5884099 intron CR45668 - chrX_10_5880001 chrX_5880001 RAL-850 3624 chrX 5883810 5883835 chrX 5884073 5884126 pogo 9 286 0.0 9.5 4.8 1.6 316 chrX 5883810 intron CR45668 - chrX 5883968 intron CR45668 - chrX 5884126 intron CR45668 - chrX_9_5880001 chrX_5880001 RAL-850 3625 chrX 5884123 5884177 chrX 5884414 5884466 pogo 17 291 9.5 5.5 7.5 2.0 343 chrX 5884123 intron CR45668 - chrX 5884294 intron CR45668 - chrX 5884466 intron CR45668 - chrX_17_5880001 chrX_5880001 RAL-850 3626 chrX 5886399 5886466 chrX 5886719 5886786 25 318 7.5 6.0 6.8 3.2 387 chrX 5886399 intron CR45668 - chrX 5886592 intron CR45668 - chrX 5886786 intron CR45668 - chrX_25_5885001 chrX_5885001 RAL-850 3627 chrX 5924124 5924150 chrX 5924257 5924282 13 131 12.0 18.0 15.0 0.8 158 chrX 5924124 intron CG3726 + chrX 5924203 intron CG3726 + chrX 5924282 intron CG3726 + chrX_13_5920001 chrX_5920001 RAL-850 3628 chrX 6080784 6080826 chrX 6080918 6080960 11 132 14.5 6.0 10.2 1.0 176 chrX 6080784 intron CG4660 - chrX 6080872 intron CG4660 - chrX 6080960 intron CG4660 - chrX_11_6080001 chrX_6080001 RAL-850 3629 chrX 6171557 6171602 chrX 6179024 6179085 Quasimodo 13 7479 7.0 9.5 8.2 1.4 7528 chrX 6171557 intron Ca-alpha1T - chrX 6175321 intron Ca-alpha1T - chrX 6179085 intron Ca-alpha1T - chrX_13_6175001 chrX_6175001 RAL-850 3630 chrX 6215485 6215514 chrX 6215611 6215640 15 129 13.0 13.5 13.2 1.1 155 chrX 6215485 intergenic not near genes chrX 6215562 intergenic not near genes chrX 6215640 intergenic not near genes chrX_15_6215001 chrX_6215001 RAL-850 3631 chrX 6306506 6306579 chrX 6306630 6306686 22 123 2.0 0.0 1.0 11.0 180 chrX 6306506 3` UTR CG3823 + chrX 6306596 3` UTR CG3823 + chrX 6306686 3` UTR CG3823 + chrX_22_6305001 chrX_6305001 RAL-850 3632 chrX 6335218 6335241 chrX 6337778 6337800 Tirant 11 2560 0.0 13.0 6.5 1.5 2582 chrX 6335218 intergenic not near genes chrX 6336509 intergenic not near genes chrX 6337800 5` UTR CG3842 + chrX_11_6335001 chrX_6335001 RAL-850 3633 chrX 6375190 6375258 chrX 6375446 6375516 27 255 9.5 8.0 8.8 2.8 326 chrX 6375190 intergenic not near genes chrX 6375353 intergenic not near genes chrX 6375516 intergenic not near genes chrX_27_6375001 chrX_6375001 RAL-850 3634 chrX 6388615 6388695 chrX 6388741 6388821 38 125 9.0 7.5 8.2 4.1 206 chrX 6388615 intergenic not near genes chrX 6388718 intergenic not near genes chrX 6388821 intergenic not near genes chrX_38_6385001 chrX_6385001 RAL-850 3635 chrX 6392828 6392845 chrX 6397643 6397660 Doc 13 4815 20.0 7.5 13.8 0.9 4832 chrX 6392828 intergenic not near genes chrX 6395244 intergenic not near genes chrX 6397660 intergenic not near genes chrX_13_6395001 chrX_6395001 RAL-850 3636 chrX 6392846 6392895 chrX 6397639 6397710 Doc 23 4811 7.5 7.5 7.5 2.7 4864 chrX 6392846 intergenic not near genes chrX 6395278 intergenic not near genes chrX 6397710 intergenic not near genes chrX_23_6395001 chrX_6395001 RAL-850 3637 chrX 6429966 6429994 chrX 6435479 6435506 Rt1c 12 5510 14.5 18.0 16.2 0.7 5540 chrX 6429966 intron CG42340 - chrX 6432736 intron CG42340 - chrX 6435506 intron CG42340 - chrX_12_6430001 chrX_6430001 RAL-850 3638 chrX 6445264 6445331 chrX 6451072 6451139 297 7 5808 6.0 8.5 7.2 0.9 5875 chrX 6445264 intron CG42340 - chrX 6448202 intron CG42340 - chrX 6451139 intron CG42340 - chrX_7_6445001 chrX_6445001 RAL-850 3639 chrX 6473465 6473521 chrX 6473733 6473805 33 286 6.5 7.0 6.8 4.2 340 chrX 6473465 intron CG42340 - chrX 6473635 intron CG42340 - chrX 6473805 intron CG42340 - chrX_33_6470001 chrX_6470001 RAL-850 3640 chrX 6487935 6487948 chrX 6488067 6488080 4 132 21.5 13.0 17.2 0.2 145 chrX 6487935 intron CG42340 - chrX 6488008 intron CG42340 - chrX 6488080 intron CG42340 - chrX_4_6485001 chrX_6485001 RAL-850 3641 chrX 6487949 6487979 chrX 6488063 6488111 18 130 13.0 11.5 12.2 1.4 162 chrX 6487949 intron CG42340 - chrX 6488030 intron CG42340 - chrX 6488111 intron CG42340 - chrX_18_6485001 chrX_6485001 RAL-850 3642 chrX 6562776 6562845 chrX 6571308 6571377 Tirant 25 8527 6.0 12.5 9.2 2.5 8601 chrX 6562776 intron CG34417 + chrX 6567076 intron CG34417 + chrX 6571377 intron CG34417 + chrX_25_6565001 chrX_6565001 RAL-850 3643 chrX 6591804 6591843 chrX 6591939 6591978 17 135 17.0 0.0 8.5 1.8 174 chrX 6591804 intron Pat1 + chrX 6591891 intron Pat1 + chrX 6591978 intron Pat1 + chrX_17_6590001 chrX_6590001 RAL-850 3644 chrX 6652980 6653030 chrX 6653106 6653155 8 124 5.5 7.0 6.2 1.1 175 chrX 6652980 3` UTR pigs + chrX 6653068 intergenic CG3226 -,pigs + chrX 6653155 3` UTR CG3226 - chrX_8_6650001 chrX_6650001 RAL-850 3645 chrX 6733637 6733672 chrX 6733768 6733795 10 129 13.5 14.0 13.8 0.7 158 chrX 6733637 intron,intron CG3168 -,CR43461 + chrX 6733716 intron,intron CG3168 -,CR43461 + chrX 6733795 intron,intron CG3168 -,CR43461 + chrX_10_6730001 chrX_6730001 RAL-850 3646 chrX 6792037 6792090 chrX 6792178 6792231 8 140 3.5 10.5 7.0 1.0 194 chrX 6792037 intron C3G - chrX 6792134 intron C3G - chrX 6792231 intron C3G - chrX_8_6790001 chrX_6790001 RAL-850 3647 chrX 6814243 6814269 chrX 6814371 6814397 11 128 6.5 3.5 5.0 1.8 154 chrX 6814243 exon iav + chrX 6814320 intron iav + chrX 6814397 intron iav + chrX_11_6810001 chrX_6810001 RAL-850 3648 chrX 6865740 6865796 chrX 6865870 6865930 24 132 11.5 13.5 12.5 1.8 190 chrX 6865740 intron CG14434 - chrX 6865835 intron CG14434 - chrX 6865930 intron CG14434 - chrX_24_6865001 chrX_6865001 RAL-850 3649 chrX 6897280 6897293 chrX 6897630 6897643 10 350 3.0 4.0 3.5 2.2 363 chrX 6897280 intergenic not near genes chrX 6897462 intergenic not near genes chrX 6897643 intergenic not near genes chrX_10_6895001 chrX_6895001 RAL-850 3650 chrX 6897638 6897705 chrX 6897798 6897865 34 159 4.0 4.5 4.2 6.5 227 chrX 6897638 intergenic not near genes chrX 6897752 intergenic not near genes chrX 6897865 intergenic not near genes chrX_34_6895001 chrX_6895001 RAL-850 3651 chrX 6901330 6901375 chrX 6901456 6901492 11 125 8.5 7.0 7.8 1.2 162 chrX 6901330 intergenic not near genes chrX 6901411 intergenic not near genes chrX 6901492 intergenic not near genes chrX_11_6900001 chrX_6900001 RAL-850 3652 chrX 6941525 6941592 chrX 6941652 6941719 15 124 1.5 4.0 2.8 3.9 194 chrX 6941525 intron CG14431 + chrX 6941622 intron CG14431 + chrX 6941719 intron CG14431 + chrX_15_6940001 chrX_6940001 RAL-850 3653 chrX 6979482 6979559 chrX 6979974 6980046 40 486 3.5 11.0 7.2 4.9 564 chrX 6979482 intron ogre - chrX 6979764 intron ogre - chrX 6980046 intron ogre - chrX_40_6975001 chrX_6975001 RAL-850 3654 chrX 6988494 6988524 chrX 6988629 6988659 10 135 9.0 6.5 7.8 1.1 165 chrX 6988494 intron ogre - chrX 6988576 intron ogre - chrX 6988659 intron ogre - chrX_10_6985001 chrX_6985001 RAL-850 3655 chrX 6989469 6989529 chrX 6989606 6989666 15 137 5.0 12.0 8.5 1.6 197 chrX 6989469 intron ogre - chrX 6989568 intron ogre - chrX 6989666 intron ogre - chrX_15_6985001 chrX_6985001 RAL-850 3656 chrX 7023559 7023632 chrX 7030999 7031030 Tabor 29 7433 6.0 11.5 8.8 3.0 7471 chrX 7023559 intron CG12541 - chrX 7027294 intron CG12541 - chrX 7031030 intron CG12541 - chrX_29_7025001 chrX_7025001 RAL-850 3657 chrX 7125220 7125265 chrX 7134429 7134474 roo 19 9206 0.0 12.0 6.0 2.7 9254 chrX 7125220 intergenic not near genes chrX 7129847 intergenic not near genes chrX 7134474 intergenic not near genes chrX_19_7125001 chrX_7125001 RAL-850 3658 chrX 7235516 7235543 chrX 7235653 7235679 10 137 0.0 8.5 4.2 1.9 163 chrX 7235516 intron,intron CG9650 +,CR44357 - chrX 7235598 intron,intron CG9650 +,CR44357 - chrX 7235679 intron,intron CG9650 +,CR44357 - chrX_10_7235001 chrX_7235001 RAL-850 3659 chrX 7346795 7346868 chrX 7346924 7346996 21 127 3.5 7.0 5.2 3.4 201 chrX 7346795 intron,intron,3` UTR CR44357 -,CG1677 -,CG15034 - chrX 7346896 intron,intron,3` UTR CR44357 -,CG1677 -,CG15034 - chrX 7346996 intron,intron,exon CR44357 -,CG1677 -,CG15034 - chrX_21_7345001 chrX_7345001 RAL-850 3660 chrX 7470181 7470222 chrX 7470319 7470360 7 138 9.5 12.0 10.8 0.6 179 chrX 7470181 intergenic not near genes chrX 7470270 intergenic not near genes chrX 7470360 intergenic not near genes chrX_7_7470001 chrX_7470001 RAL-850 3661 chrX 7480787 7480808 chrX 7482344 7482348 jockey 6 1548 4.5 14.5 9.5 0.6 1561 chrX 7480787 intergenic not near genes chrX 7481568 intergenic not near genes chrX 7482348 intergenic not near genes chrX_6_7480001 chrX_7480001 RAL-850 3662 chrX 7570591 7570659 chrX 7570775 7570843 19 184 5.5 10.5 8.0 2.1 252 chrX 7570591 intergenic not near genes chrX 7570717 intergenic not near genes chrX 7570843 intergenic not near genes chrX_19_7570001 chrX_7570001 RAL-850 3663 chrX 7702447 7702526 chrX 7702601 7702668 15 143 0.0 10.0 5.0 2.5 221 chrX 7702447 intron CHES-1-like - chrX 7702558 intron CHES-1-like - chrX 7702668 intron CHES-1-like - chrX_15_7700001 chrX_7700001 RAL-850 3664 chrX 7702867 7702880 chrX 7703356 7703369 jockey 8 489 21.5 10.5 16.0 0.5 502 chrX 7702867 intron CHES-1-like - chrX 7703118 intron CHES-1-like - chrX 7703369 intron CHES-1-like - chrX_8_7700001 chrX_7700001 RAL-850 3665 chrX 7702884 7702922 chrX 7703354 7703411 jockey 24 488 13.0 10.5 11.8 1.9 527 chrX 7702884 intron CHES-1-like - chrX 7703148 intron CHES-1-like - chrX 7703411 intron CHES-1-like - chrX_24_7700001 chrX_7700001 RAL-850 3666 chrX 7720521 7720570 chrX 7720638 7720702 11 117 7.0 0.0 3.5 2.4 181 chrX 7720521 intergenic not near genes chrX 7720612 intergenic not near genes chrX 7720702 intergenic not near genes chrX_11_7720001 chrX_7720001 RAL-850 3667 chrX 7737114 7737187 chrX 7737246 7737319 15 132 2.5 4.0 3.2 3.6 205 chrX 7737114 5` UTR Tom40 + chrX 7737216 intron Tom40 + chrX 7737319 intron Tom40 + chrX_15_7735001 chrX_7735001 RAL-850 3668 chrX 7832391 7832458 chrX 7832530 7832597 21 138 7.5 7.5 7.5 2.5 206 chrX 7832391 intron CG1402 + chrX 7832494 intron CG1402 + chrX 7832597 intron CG1402 + chrX_21_7830001 chrX_7830001 RAL-850 3669 chrX 7845684 7845754 chrX 7847225 7847295 hopper2 21 1541 9.0 7.5 8.2 2.3 1611 chrX 7845684 intergenic not near genes chrX 7846490 intergenic not near genes chrX 7847295 intergenic not near genes chrX_21_7845001 chrX_7845001 RAL-850 3670 chrX 7881808 7881874 chrX 7881942 7882006 11 132 5.0 7.5 6.2 1.5 198 chrX 7881808 intergenic Ir7e -,Ir7f - chrX 7881907 intergenic Ir7f -,Ir7e - chrX 7882006 3` UTR Ir7f - chrX_11_7880001 chrX_7880001 RAL-850 3671 chrX 8031391 8031452 chrX 8035750 8035790 Juan 31 4358 12.0 7.0 9.5 3.0 4399 chrX 8031391 intergenic not near genes chrX 8033590 intergenic not near genes chrX 8035790 3` UTR CG2233 - chrX_31_8030001 chrX_8030001 RAL-850 3672 chrX 8364797 8364868 chrX 8365244 8365315 BS 25 447 6.0 8.0 7.0 3.1 518 chrX 8364797 intron nAChRalpha3 - chrX 8365056 intron nAChRalpha3 - chrX 8365315 intron nAChRalpha3 - chrX_25_8365001 chrX_8365001 RAL-850 3673 chrX 8371102 8371180 chrX 8371314 8371370 11 201 9.0 4.0 6.5 1.5 268 chrX 8371102 intergenic not near genes chrX 8371236 intergenic not near genes chrX 8371370 intergenic not near genes chrX_11_8370001 chrX_8370001 RAL-850 3674 chrX 8392540 8392547 chrX 8392666 8392674 4 126 8.5 18.5 13.5 0.3 134 chrX 8392540 intergenic not near genes chrX 8392607 intergenic not near genes chrX 8392674 intergenic not near genes chrX_4_8390001 chrX_8390001 RAL-850 3675 chrX 8392549 8392581 chrX 8392662 8392708 16 122 7.5 17.0 12.2 1.2 159 chrX 8392549 intergenic not near genes chrX 8392628 intergenic not near genes chrX 8392708 intergenic not near genes chrX_16_8390001 chrX_8390001 RAL-850 3676 chrX 8440740 8440757 chrX 8440878 8440895 14 138 13.0 14.0 13.5 1.0 155 chrX 8440740 exon CG1440 + chrX 8440818 3` UTR CG1440 + chrX 8440895 3` UTR CG1440 + chrX_14_8440001 chrX_8440001 RAL-850 3677 chrX 8513050 8513124 chrX 8513367 8513413 22 315 6.0 5.5 5.8 3.2 363 chrX 8513050 intron CG33181 + chrX 8513232 intron CG33181 + chrX 8513413 intron CG33181 + chrX_22_8510001 chrX_8510001 RAL-850 3678 chrX 8621016 8621052 chrX 8621145 8621171 17 123 15.5 13.0 14.2 1.1 155 chrX 8621016 intergenic not near genes chrX 8621094 intergenic not near genes chrX 8621171 intergenic not near genes chrX_17_8620001 chrX_8620001 RAL-850 3679 chrX 8726133 8726213 chrX 8726280 8726357 20 145 8.5 2.5 5.5 3.1 224 chrX 8726133 intergenic CR43297 + chrX 8726245 intergenic CR43297 + chrX 8726357 intergenic CR43297 + chrX_20_8725001 chrX_8725001 RAL-850 3680 chrX 8727364 8727425 chrX 8727491 8727552 7 127 2.0 3.5 2.8 1.8 188 chrX 8727364 intergenic not near genes chrX 8727458 intergenic not near genes chrX 8727552 intergenic not near genes chrX_7_8725001 chrX_8725001 RAL-850 3681 chrX 8744240 8744257 chrX 8744442 8744459 4 202 10.5 4.0 7.2 0.5 219 chrX 8744240 intergenic not near genes chrX 8744350 intergenic not near genes chrX 8744459 intergenic not near genes chrX_4_8740001 chrX_8740001 RAL-850 3682 chrX 8744266 8744317 chrX 8744440 8744483 16 198 5.5 4.0 4.8 2.8 217 chrX 8744266 intergenic not near genes chrX 8744374 intergenic not near genes chrX 8744483 intergenic not near genes chrX_16_8740001 chrX_8740001 RAL-850 3683 chrX 8772200 8772244 chrX 8772329 8772373 18 125 12.0 12.5 12.2 1.4 173 chrX 8772200 intron Lim1 - chrX 8772286 intron Lim1 - chrX 8772373 intron Lim1 - chrX_18_8770001 chrX_8770001 RAL-850 3684 chrX 8832226 8832278 chrX 8832352 8832404 4 126 3.5 4.5 4.0 0.8 178 chrX 8832226 intergenic not near genes chrX 8832315 intergenic not near genes chrX 8832404 intergenic not near genes chrX_4_8830001 chrX_8830001 RAL-850 3685 chrX 8861377 8861413 chrX 8861527 8861565 10 150 5.5 9.0 7.2 1.2 188 chrX 8861377 intron CG12075 + chrX 8861471 intron CG12075 + chrX 8861565 intron CG12075 + chrX_10_8860001 chrX_8860001 RAL-850 3686 chrX 8888591 8888661 chrX 8888718 8888788 20 127 4.5 6.5 5.5 3.1 197 chrX 8888591 intron Moe - chrX 8888690 intron Moe - chrX 8888788 intron Moe - chrX_20_8885001 chrX_8885001 RAL-850 3687 chrX 8894949 8895001 chrX 8895084 8895137 18 136 7.0 7.0 7.0 2.2 188 chrX 8894949 intron Moe - chrX 8895043 intron Moe - chrX 8895137 intron Moe - chrX_18_8895001 chrX_8895001 RAL-850 3688 chrX 8922289 8922353 chrX 8922773 8922837 jockey 18 479 12.0 13.0 12.5 1.3 548 chrX 8922289 intron rdgA + chrX 8922563 intron rdgA + chrX 8922837 intron rdgA + chrX_18_8920001 chrX_8920001 RAL-850 3689 chrX 8948723 8948788 chrX 8956282 8956327 roo 21 7559 0.0 8.0 4.0 4.2 7604 chrX 8948723 intron rdgA + chrX 8952525 intron rdgA + chrX 8956327 intron rdgA + chrX_21_8950001 chrX_8950001 RAL-850 3690 chrX 8968824 8968860 chrX 8968944 8968987 13 123 14.0 19.5 16.8 0.7 163 chrX 8968824 intron rdgA + chrX 8968906 intron rdgA + chrX 8968987 intron rdgA + chrX_13_8965001 chrX_8965001 RAL-850 3691 chrX 9062695 9062721 chrX 9062818 9062849 5 127 0.5 0.0 0.2 4.2 154 chrX 9062695 intron CG15365 - chrX 9062772 intron CG15365 - chrX 9062849 intron CG15365 - chrX_5_9060001 chrX_9060001 RAL-850 3692 chrX 9190742 9190784 chrX 9190883 9190925 4 137 9.0 7.0 8.0 0.4 183 chrX 9190742 intergenic CG12115 - chrX 9190834 intergenic CG12115 - chrX 9190925 intergenic CG12115 - chrX_4_9190001 chrX_9190001 RAL-850 3693 chrX 9202670 9202692 chrX 9202796 9202818 11 126 6.0 3.5 4.8 1.9 148 chrX 9202670 intergenic not near genes chrX 9202744 intergenic not near genes chrX 9202818 intergenic not near genes chrX_11_9200001 chrX_9200001 RAL-850 3694 chrX 9204809 9204849 chrX 9204942 9204982 18 131 13.5 14.0 13.8 1.2 173 chrX 9204809 intergenic not near genes chrX 9204896 intergenic not near genes chrX 9204982 intergenic not near genes chrX_18_9200001 chrX_9200001 RAL-850 3695 chrX 9218035 9218087 chrX 9218176 9218228 10 140 8.0 3.5 5.8 1.5 193 chrX 9218035 3` UTR t - chrX 9218132 3` UTR t - chrX 9218228 3` UTR t - chrX_10_9215001 chrX_9215001 RAL-850 3696 chrX 9337898 9337909 chrX 9338036 9338044 7 140 18.5 10.0 14.2 0.5 146 chrX 9337898 intron CG34449 - chrX 9337971 intron CG34449 - chrX 9338044 intron CG34449 - chrX_7_9335001 chrX_9335001 RAL-850 3697 chrX 9337910 9337964 chrX 9338033 9338078 24 135 7.5 7.0 7.2 2.9 168 chrX 9337910 intron CG34449 - chrX 9337994 intron CG34449 - chrX 9338078 exon CG34449 - chrX_24_9335001 chrX_9335001 RAL-850 3698 chrX 9439069 9439142 chrX 9439311 9439384 23 240 5.5 5.5 5.5 3.5 315 chrX 9439069 intron mgl - chrX 9439226 intron mgl - chrX 9439384 intron mgl - chrX_23_9435001 chrX_9435001 RAL-850 3699 chrX 9473835 9473850 chrX 9474105 9474135 9 280 0.5 2.5 1.5 3.6 300 chrX 9473835 intron mgl - chrX 9473985 intron mgl - chrX 9474135 intron mgl - chrX_9_9470001 chrX_9470001 RAL-850 3700 chrX 9473851 9473878 chrX 9474091 9474162 11 267 0.5 2.5 1.5 4.4 311 chrX 9473851 intron mgl - chrX 9474006 intron mgl - chrX 9474162 intron mgl - chrX_11_9470001 chrX_9470001 RAL-850 3701 chrX 9503211 9503211 chrX 22383088 22383376 15 12880107 28.0 204.5 116.2 0.1 12880165 chrX 9503211 3` UTR CG32700 - chrX 15943294 intron CG8924 + chrX 22383376 intergenic not near genes chrX_15_15940001 chrX_15940001 RAL-850 3702 chrX 9508097 9508157 chrX 9509665 9509725 jockey 23 1568 7.5 7.5 7.5 2.7 1628 chrX 9508097 intron CG32700 - chrX 9508911 intron CG32700 - chrX 9509725 intron CG32700 - chrX_23_9505001 chrX_9505001 RAL-850 3703 chrX 9544786 9544805 chrX 9546685 9546704 6 1899 4.0 20.5 12.2 0.5 1918 chrX 9544786 intron CG32700 - chrX 9545745 intron CG32700 - chrX 9546704 intron CG32700 - chrX_6_9545001 chrX_9545001 RAL-850 3704 chrX 9555377 9555444 chrX 9555531 9555603 27 156 6.5 6.0 6.2 3.8 226 chrX 9555377 3` UTR RpS28b + chrX 9555490 3` UTR RpS28b + chrX 9555603 3` UTR RpS28b + chrX_27_9555001 chrX_9555001 RAL-850 3705 chrX 9575754 9575815 chrX 9576118 9576186 mdg3 22 370 14.5 9.5 12.0 1.7 432 chrX 9575754 intron,exon CG32699 -,CG42395 - chrX 9575970 intron,intron CG32699 -,CG42395 - chrX 9576186 intron,5` UTR CG32699 -,CG42395 - chrX_22_9575001 chrX_9575001 RAL-850 3706 chrX 9616958 9617001 chrX 9617085 9617085 6 120 6.0 0.5 3.2 1.4 127 chrX 9616958 intron CG42797 + chrX 9617022 intron CG42797 + chrX 9617085 intron CG42797 + chrX_6_9615001 chrX_9615001 RAL-850 3707 chrX 9631988 9632070 chrX 9632208 9632312 5 233 3.5 0.0 1.8 1.8 324 chrX 9631988 intron l(1)G0232 - chrX 9632150 intron l(1)G0232 - chrX 9632312 intron l(1)G0232 - chrX_5_9630001 chrX_9630001 RAL-850 3708 chrX 9791816 9791890 chrX 9791965 9792034 17 147 6.0 12.0 9.0 1.7 218 chrX 9791816 intron CG32698 + chrX 9791925 intron CG32698 + chrX 9792034 intron CG32698 + chrX_17_9790001 chrX_9790001 RAL-850 3709 chrX 9837828 9837861 chrX 9837957 9837990 16 126 13.0 12.0 12.5 1.2 162 chrX 9837828 intron CG32698 + chrX 9837909 intron CG32698 + chrX 9837990 intron CG32698 + chrX_16_9835001 chrX_9835001 RAL-850 3710 chrX 9837862 9837891 chrX 9837955 9838000 11 121 8.0 12.0 10.0 1.0 138 chrX 9837862 intron CG32698 + chrX 9837931 intron CG32698 + chrX 9838000 intron CG32698 + chrX_11_9835001 chrX_9835001 RAL-850 3711 chrX 9839302 9839366 chrX 9839435 9839498 10 132 0.5 4.5 2.5 2.9 196 chrX 9839302 intron CG32698 + chrX 9839400 intron CG32698 + chrX 9839498 intron CG32698 + chrX_10_9835001 chrX_9835001 RAL-850 3712 chrX 9846171 9846187 chrX 9846297 9846313 10 126 11.0 11.0 11.0 0.8 142 chrX 9846171 exon CG32698 + chrX 9846242 intron CG32698 + chrX 9846313 intron CG32698 + chrX_10_9845001 chrX_9845001 RAL-850 3713 chrX 9923353 9923417 chrX 9923494 9923558 16 136 6.5 11.0 8.8 1.6 205 chrX 9923353 intergenic not near genes chrX 9923456 intergenic not near genes chrX 9923558 intergenic not near genes chrX_16_9920001 chrX_9920001 RAL-850 3714 chrX 9988471 9988519 chrX 9988625 9988673 22 154 7.5 7.0 7.2 2.7 202 chrX 9988471 intergenic not near genes chrX 9988572 intergenic not near genes chrX 9988673 intergenic not near genes chrX_22_9985001 chrX_9985001 RAL-850 3715 chrX 10020068 10020088 chrX 10020230 10020250 5 162 4.0 9.0 6.5 0.7 182 chrX 10020068 intron Cht6 + chrX 10020159 intron Cht6 + chrX 10020250 intron Cht6 + chrX_5_10020001 chrX_10020001 RAL-850 3716 chrX 10138173 10138239 chrX 10145727 10145793 412 20 7552 10.0 7.5 8.8 2.0 7620 chrX 10138173 intron,intron RhoU +,CR44894 - chrX 10141983 intron,intron RhoU +,CR44894 - chrX 10145793 intron,intron RhoU +,CR44894 - chrX_20_10140001 chrX_10140001 RAL-850 3717 chrX 10147393 10147420 chrX 10147517 10147551 8 127 9.0 7.0 8.0 0.9 158 chrX 10147393 intron,intron RhoU +,CR44894 - chrX 10147472 intron,intron RhoU +,CR44894 - chrX 10147551 intron,intron RhoU +,CR44894 - chrX_8_10145001 chrX_10145001 RAL-850 3718 chrX 10147432 10147441 chrX 10147539 10147572 5 125 7.5 11.5 9.5 0.5 140 chrX 10147432 intron,intron RhoU +,CR44894 - chrX 10147502 intron,intron RhoU +,CR44894 - chrX 10147572 intron,intron RhoU +,CR44894 - chrX_5_10145001 chrX_10145001 RAL-850 3719 chrX 10147452 10147458 chrX 10147518 10147540 7 104 6.5 7.0 6.8 0.9 88 chrX 10147452 intron,intron RhoU +,CR44894 - chrX 10147496 intron,intron RhoU +,CR44894 - chrX 10147540 intron,intron RhoU +,CR44894 - chrX_7_10145001 chrX_10145001 RAL-850 3720 chrX 10154243 10154304 chrX 10154369 10154424 20 120 7.5 7.0 7.2 2.4 181 chrX 10154243 intron,intron CR44894 -,CG12645 + chrX 10154334 intron,intron CR44894 -,CG12645 + chrX 10154424 intron,exon CR44894 -,CG12645 + chrX_20_10150001 chrX_10150001 RAL-850 3721 chrX 10216802 10216845 chrX 10216928 10216955 13 126 16.0 12.5 14.2 0.9 153 chrX 10216802 3` UTR l(1)G0230 + chrX 10216878 3` UTR l(1)G0230 + chrX 10216955 3` UTR l(1)G0230 + chrX_13_10215001 chrX_10215001 RAL-850 3722 chrX 10317525 10317575 chrX 10317643 10317703 19 127 0.0 5.0 2.5 5.4 178 chrX 10317525 intron alpha-Man-I - chrX 10317614 intron alpha-Man-I - chrX 10317703 intron alpha-Man-I - chrX_19_10315001 chrX_10315001 RAL-850 3723 chrX 10330673 10330673 chrX 10330864 10330906 4 210 19.5 12.0 15.8 0.2 233 chrX 10330673 exon CG15306 - chrX 10330790 exon CG15306 - chrX 10330906 exon CG15306 - chrX_4_10330001 chrX_10330001 RAL-850 3724 chrX 10348776 10348807 chrX 10356391 10356414 springer 7 7612 6.0 7.0 6.5 0.9 7638 chrX 10348776 intergenic snoRNA:U3:9B + chrX 10352595 intergenic not near genes chrX 10356414 intergenic l(1)G0289 - chrX_7_10350001 chrX_10350001 RAL-850 3725 chrX 10367145 10367206 chrX 10367297 10367328 25 149 6.0 7.0 6.5 3.3 183 chrX 10367145 exon CG32679 - chrX 10367236 intron CG32679 - chrX 10367328 intron CG32679 - chrX_25_10365001 chrX_10365001 RAL-850 3726 chrX 10446637 10446705 chrX 10446769 10446837 26 132 9.0 6.5 7.8 3.0 200 chrX 10446637 intron CG32683 - chrX 10446737 intron CG32683 - chrX 10446837 intron CG32683 - chrX_26_10445001 chrX_10445001 RAL-850 3727 chrX 10453028 10453095 chrX 10453269 10453336 17 241 2.0 8.0 5.0 2.8 308 chrX 10453028 intron CG32683 - chrX 10453182 intron CG32683 - chrX 10453336 intron CG32683 - chrX_17_10450001 chrX_10450001 RAL-850 3728 chrX 10550817 10550879 chrX 10552334 10552381 hobo 15 1511 9.5 8.5 9.0 1.5 1564 chrX 10550817 intron spri - chrX 10551599 intron spri - chrX 10552381 intron spri - chrX_15_10550001 chrX_10550001 RAL-850 3729 chrX 10686007 10686069 chrX 10691194 10691256 roo 25 5186 7.5 10.5 9.0 2.5 5249 chrX 10686007 intron X11Lbeta + chrX 10688632 intron X11Lbeta + chrX 10691256 intron X11Lbeta + chrX_25_10685001 chrX_10685001 RAL-850 3730 chrX 10772644 10772698 chrX 10772766 10772819 Tirant 18 125 6.5 5.5 6.0 2.6 175 chrX 10772644 intron CG15211 + chrX 10772732 intron CG15211 + chrX 10772819 intron CG15211 + chrX_18_10770001 chrX_10770001 RAL-850 3731 chrX 10811821 10811891 chrX 10811963 10811997 22 138 7.5 0.5 4.0 4.4 176 chrX 10811821 intron Imp - chrX 10811909 intron Imp - chrX 10811997 intron Imp - chrX_22_10810001 chrX_10810001 RAL-850 3732 chrX 11095955 11096007 chrX 11103107 11103159 HMS-Beagle 7 7152 7.5 9.0 8.2 0.8 7204 chrX 11095955 intergenic not near genes chrX 11099557 intergenic not near genes chrX 11103159 intron CG42249 + chrX_7_11095001 chrX_11095001 RAL-850 3733 chrX 11184209 11184256 chrX 11189337 11189385 flea 5 5129 9.5 9.5 9.5 0.5 5176 chrX 11184209 intergenic not near genes chrX 11186797 intergenic not near genes chrX 11189385 intergenic not near genes chrX_5_11185001 chrX_11185001 RAL-850 3734 chrX 11205260 11205313 chrX 11205386 11205439 10 126 6.0 9.0 7.5 1.2 179 chrX 11205260 intergenic not near genes chrX 11205350 intergenic not near genes chrX 11205439 intergenic not near genes chrX_10_11205001 chrX_11205001 RAL-850 3735 chrX 11254123 11254193 chrX 11254284 11254351 26 158 7.0 7.0 7.0 3.2 228 chrX 11254123 intron CG44422 - chrX 11254237 intron CG44422 - chrX 11254351 intron CG44422 - chrX_26_11250001 chrX_11250001 RAL-850 3736 chrX 11268573 11268589 chrX 11270098 11270114 hopper2 5 1525 6.5 8.5 7.5 0.6 1541 chrX 11268573 intron CG44422 - chrX 11269344 intron CG44422 - chrX 11270114 intron CG44422 - chrX_5_11265001 chrX_11265001 RAL-850 3737 chrX 11312012 11312085 chrX 11319415 11319488 Stalker2 13 7399 6.0 8.5 7.2 1.6 7476 chrX 11312012 intergenic not near genes chrX 11315750 intergenic not near genes chrX 11319488 intergenic not near genes chrX_13_11315001 chrX_11315001 RAL-850 3738 chrX 11379716 11379786 chrX 11379911 11379981 26 194 5.0 7.0 6.0 3.7 265 chrX 11379716 intron dlg1 + chrX 11379848 intron dlg1 + chrX 11379981 intron dlg1 + chrX_26_11375001 chrX_11375001 RAL-850 3739 chrX 11380685 11380752 chrX 11380817 11380879 22 131 8.5 10.0 9.2 2.2 194 chrX 11380685 intron dlg1 + chrX 11380782 intron dlg1 + chrX 11380879 intron dlg1 + chrX_22_11380001 chrX_11380001 RAL-850 3740 chrX 11535010 11535044 chrX 11541530 11541564 Burdock 11 6519 12.0 7.5 9.8 1.0 6554 chrX 11535010 intron Drak + chrX 11538287 intron Drak + chrX 11541564 intron Drak + chrX_11_11535001 chrX_11535001 RAL-850 3741 chrX 11629613 11629623 chrX 11629742 11629752 5 129 11.5 6.5 9.0 0.5 139 chrX 11629613 intron Ptp10D + chrX 11629682 intron Ptp10D + chrX 11629752 intron Ptp10D + chrX_5_11625001 chrX_11625001 RAL-850 3742 chrX 11629626 11629683 chrX 11629736 11629809 14 124 5.0 6.5 5.8 2.1 183 chrX 11629626 intron Ptp10D + chrX 11629718 intron Ptp10D + chrX 11629809 intron Ptp10D + chrX_14_11625001 chrX_11625001 RAL-850 3743 chrX 11633371 11633441 chrX 11640475 11640545 297 29 7104 12.0 10.5 11.2 2.4 7174 chrX 11633371 intron Ptp10D + chrX 11636958 intron Ptp10D + chrX 11640545 intron Ptp10D + chrX_29_11635001 chrX_11635001 RAL-850 3744 chrX 11645068 11645117 chrX 11648287 11648336 NOF 13 3219 5.5 4.5 5.0 2.2 3268 chrX 11645068 intron Ptp10D + chrX 11646702 intron Ptp10D + chrX 11648336 intron Ptp10D + chrX_13_11645001 chrX_11645001 RAL-850 3745 chrX 11761972 11761991 chrX 11762101 11762113 4 124 6.5 11.5 9.0 0.4 141 chrX 11761972 intron m + chrX 11762042 intron m + chrX 11762113 intron m + chrX_4_11760001 chrX_11760001 RAL-850 3746 chrX 11782895 11782915 chrX 11783025 11783045 8 130 10.0 16.0 13.0 0.6 150 chrX 11782895 intergenic not near genes chrX 11782970 intergenic not near genes chrX 11783045 intergenic not near genes chrX_8_11780001 chrX_11780001 RAL-850 3747 chrX 11798970 11799031 chrX 11799106 11799167 15 136 6.5 5.0 5.8 2.2 197 chrX 11798970 intron CkIIbeta + chrX 11799068 intron CkIIbeta + chrX 11799167 intron CkIIbeta + chrX_15_11795001 chrX_11795001 RAL-850 3748 chrX 11801538 11801546 chrX 11801664 11801672 5 126 11.0 4.5 7.8 0.6 134 chrX 11801538 3` UTR CkIIbeta + chrX 11801605 intergenic CkIIbeta +,Hsc70-3 - chrX 11801672 intergenic Hsc70-3 -,CkIIbeta + chrX_5_11800001 chrX_11800001 RAL-850 3749 chrX 11838979 11839067 chrX 11839287 11839365 26 298 4.5 8.0 6.2 3.6 386 chrX 11838979 intergenic not near genes chrX 11839172 intergenic Cyp28c1 + chrX 11839365 intergenic Cyp28c1 + chrX_26_11835001 chrX_11835001 RAL-850 3750 chrX 11880877 11880921 chrX 11881009 11881053 17 132 10.0 4.0 7.0 2.1 176 chrX 11880877 exon CG10353 - chrX 11880965 intron CG10353 - chrX 11881053 intron CG10353 - chrX_17_11880001 chrX_11880001 RAL-850 3751 chrX 11922316 11922383 chrX 11922501 11922569 23 186 5.0 7.5 6.2 3.2 253 chrX 11922316 exon Sclp - chrX 11922442 intron Sclp - chrX 11922569 intron Sclp - chrX_23_11920001 chrX_11920001 RAL-850 3752 chrX 12136416 12136494 chrX 12136547 12136620 5 128 0.0 5.0 2.5 1.4 204 chrX 12136416 intron Ten-a + chrX 12136518 intron Ten-a + chrX 12136620 intron Ten-a + chrX_5_12135001 chrX_12135001 RAL-850 3753 chrX 12168104 12168139 chrX 12173590 12173631 I-element 10 5491 4.5 5.0 4.8 1.7 5527 chrX 12168104 intron Ten-a + chrX 12170868 intron Ten-a + chrX 12173631 intron Ten-a + chrX_10_12170001 chrX_12170001 RAL-850 3754 chrX 12184235 12184259 chrX 12184370 12184389 12 132 8.0 14.0 11.0 1.0 154 chrX 12184235 intron Ten-a + chrX 12184312 intron Ten-a + chrX 12184389 intron Ten-a + chrX_12_12180001 chrX_12180001 RAL-850 3755 chrX 12184260 12184278 chrX 12184368 12184402 9 126 6.0 14.0 10.0 0.8 142 chrX 12184260 intron Ten-a + chrX 12184331 intron Ten-a + chrX 12184402 intron Ten-a + chrX_9_12180001 chrX_12180001 RAL-850 3756 chrX 12185312 12185384 chrX 12185441 12185503 24 127 3.5 6.0 4.8 4.1 191 chrX 12185312 intron Ten-a + chrX 12185408 intron Ten-a + chrX 12185503 intron Ten-a + chrX_24_12185001 chrX_12185001 RAL-850 3757 chrX 12301928 12301958 chrX 12303283 12303290 X-element 4 1342 9.5 8.5 9.0 0.4 1362 chrX 12301928 intron Ten-a + chrX 12302609 intron Ten-a + chrX 12303290 intron Ten-a + chrX_4_12300001 chrX_12300001 RAL-850 3758 chrX 12349204 12349259 chrX 12349330 12349383 14 118 5.5 7.0 6.2 1.9 179 chrX 12349204 intergenic not near genes chrX 12349294 intergenic not near genes chrX 12349383 intergenic not near genes chrX_14_12345001 chrX_12345001 RAL-850 3759 chrX 12350728 12350791 chrX 12350859 12350891 16 127 12.0 0.0 6.0 2.3 163 chrX 12350728 intergenic not near genes chrX 12350810 intergenic not near genes chrX 12350891 intergenic not near genes chrX_16_12350001 chrX_12350001 RAL-850 3760 chrX 12363305 12363370 chrX 12363419 12363467 33 125 10.0 11.5 10.8 2.8 162 chrX 12363305 intergenic not near genes chrX 12363386 intergenic not near genes chrX 12363467 intergenic not near genes chrX_33_12360001 chrX_12360001 RAL-850 3761 chrX 12375443 12375504 chrX 12375590 12375652 18 146 10.0 5.5 7.8 2.0 209 chrX 12375443 intergenic Ir11a - chrX 12375548 intergenic Ir11a - chrX 12375652 exon Ir11a - chrX_18_12375001 chrX_12375001 RAL-850 3762 chrX 12442042 12442117 chrX 12442174 12442249 14 132 3.5 0.0 1.8 5.0 207 chrX 12442042 intron Pkcdelta + chrX 12442146 intron Pkcdelta + chrX 12442249 intron Pkcdelta + chrX_14_12440001 chrX_12440001 RAL-850 3763 chrX 12449810 12449842 chrX 12449961 12449993 6 151 9.5 2.0 5.8 0.9 183 chrX 12449810 intron Pkcdelta + chrX 12449902 intron Pkcdelta + chrX 12449993 intron Pkcdelta + chrX_6_12445001 chrX_12445001 RAL-850 3764 chrX 12465426 12465492 chrX 12465552 12465618 18 126 4.5 0.0 2.2 5.6 192 chrX 12465426 exon CG42258 + chrX 12465522 intron CG42258 + chrX 12465618 intron CG42258 + chrX_18_12465001 chrX_12465001 RAL-850 3765 chrX 12528821 12528833 chrX 12528947 12528959 4 126 8.5 4.5 6.5 0.5 138 chrX 12528821 intron CG43921 - chrX 12528890 intron CG43921 - chrX 12528959 intron CG43921 - chrX_4_12525001 chrX_12525001 RAL-850 3766 chrX 12533771 12533812 chrX 12533898 12533938 4 127 0.0 7.5 3.8 0.8 167 chrX 12533771 intron CG43921 - chrX 12533854 intron CG43921 - chrX 12533938 intron CG43921 - chrX_4_12530001 chrX_12530001 RAL-850 3767 chrX 12537241 12537522 chrX 12537387 12537648 8 142 0.0 0.0 0.0 8.0 407 chrX 12537241 intron CG43921 - chrX 12537444 intron CG43921 - chrX 12537648 intron CG43921 - chrX_8_12535001 chrX_12535001 RAL-850 3768 chrX 12557119 12557164 chrX 12557235 12557280 9 120 11.0 9.0 10.0 0.8 161 chrX 12557119 intron CG43921 - chrX 12557200 intron CG43921 - chrX 12557280 intron CG43921 - chrX_9_12555001 chrX_12555001 RAL-850 3769 chrX 12635407 12635430 chrX 12635542 12635565 11 135 5.0 13.5 9.2 1.1 158 chrX 12635407 intron Tomosyn + chrX 12635486 intron Tomosyn + chrX 12635565 intron Tomosyn + chrX_11_12635001 chrX_12635001 RAL-850 3770 chrX 12754654 12754680 chrX 12754892 12754918 7 236 8.0 15.5 11.8 0.5 264 chrX 12754654 intergenic CR44619 + chrX 12754786 intergenic CR44619 + chrX 12754918 intergenic CR44619 + chrX_7_12750001 chrX_12750001 RAL-850 3771 chrX 12839893 12839949 chrX 12840244 12840306 12 364 5.0 5.5 5.2 1.9 413 chrX 12839893 intron Pde9 - chrX 12840100 intron Pde9 - chrX 12840306 intron Pde9 - chrX_12_12840001 chrX_12840001 RAL-850 3772 chrX 12889874 12889896 chrX 12890069 12890091 4 195 16.5 13.0 14.8 0.3 217 chrX 12889874 intron Pde9 - chrX 12889982 intron Pde9 - chrX 12890091 intron Pde9 - chrX_4_12885001 chrX_12885001 RAL-850 3773 chrX 12889903 12889938 chrX 12890067 12890125 7 189 12.5 12.5 12.5 0.5 222 chrX 12889903 intron Pde9 - chrX 12890014 intron Pde9 - chrX 12890125 intron Pde9 - chrX_7_12890001 chrX_12890001 RAL-850 3774 chrX 12912589 12912655 chrX 12912738 12912802 4 148 1.0 1.5 1.2 1.8 213 chrX 12912589 5` UTR CR45625 + chrX 12912696 5` UTR CR45625 + chrX 12912802 5` UTR CR45625 + chrX_4_12910001 chrX_12910001 RAL-850 3775 chrX 12930548 12930599 chrX 12937714 12937765 HMS-Beagle 13 7165 10.0 15.5 12.8 0.9 7217 chrX 12930548 intron fne + chrX 12934156 intron fne + chrX 12937765 intron fne + chrX_13_12930001 chrX_12930001 RAL-850 3776 chrX 13018472 13018527 chrX 13018606 13018661 17 134 7.0 2.5 4.8 2.9 189 chrX 13018472 intron rad + chrX 13018566 intron rad + chrX 13018661 intron rad + chrX_17_13015001 chrX_13015001 RAL-850 3777 chrX 13058416 13058430 chrX 13058603 13058617 6 187 14.5 6.0 10.2 0.5 201 chrX 13058416 intron rad + chrX 13058516 intron rad + chrX 13058617 intron rad + chrX_6_13055001 chrX_13055001 RAL-850 3778 chrX 13058434 13058453 chrX 13058602 13058641 4 183 11.5 6.0 8.8 0.4 207 chrX 13058434 intron rad + chrX 13058538 intron rad + chrX 13058641 intron rad + chrX_4_13055001 chrX_13055001 RAL-850 3779 chrX 13061224 13061250 chrX 13061345 13061393 9 137 7.5 4.0 5.8 1.3 169 chrX 13061224 intron rad + chrX 13061308 intron rad + chrX 13061393 intron rad + chrX_9_13060001 chrX_13060001 RAL-850 3780 chrX 13061252 13061255 chrX 13061344 13061398 4 130 6.0 3.5 4.8 0.7 146 chrX 13061252 intron rad + chrX 13061325 intron rad + chrX 13061398 intron rad + chrX_4_13060001 chrX_13060001 RAL-850 3781 chrX 13099068 13099111 chrX 13099204 13099254 10 137 1.0 2.0 1.5 4.0 186 chrX 13099068 intron CG43313 - chrX 13099161 intron CG43313 - chrX 13099254 intron CG43313 - chrX_10_13095001 chrX_13095001 RAL-850 3782 chrX 13172303 13172362 chrX 13172429 13172483 11 121 13.0 8.0 10.5 1.0 180 chrX 13172303 intron CG34411 - chrX 13172393 intron CG34411 - chrX 13172483 intron CG34411 - chrX_11_13170001 chrX_13170001 RAL-850 3783 chrX 13269185 13269192 chrX 13269311 13269318 4 126 0.5 6.0 3.2 1.0 133 chrX 13269185 intron HDAC4 - chrX 13269252 intron HDAC4 - chrX 13269318 intron HDAC4 - chrX_4_13265001 chrX_13265001 RAL-850 3784 chrX 13278110 13278181 chrX 13278243 13278314 19 133 10.0 5.5 7.8 2.2 204 chrX 13278110 intron HDAC4 - chrX 13278212 intron HDAC4 - chrX 13278314 intron HDAC4 - chrX_19_13275001 chrX_13275001 RAL-850 3785 chrX 13314376 13314401 chrX 13314521 13314546 6 145 13.5 0.0 6.8 0.8 170 chrX 13314376 intron IP3K2 + chrX 13314461 intron IP3K2 + chrX 13314546 intron IP3K2 + chrX_6_13310001 chrX_13310001 RAL-850 3786 chrX 13401436 13401508 chrX 13401838 13401910 jockey 12 402 2.5 2.5 2.5 3.4 474 chrX 13401436 intergenic CG1673 +,CG12725 - chrX 13401673 intergenic CG12725 -,CG1673 + chrX 13401910 3` UTR CG12725 - chrX_12_13400001 chrX_13400001 RAL-850 3787 chrX 13429422 13429482 chrX 13430621 13430681 jockey 20 1199 8.5 7.5 8.0 2.2 1259 chrX 13429422 intergenic not near genes chrX 13430052 intergenic not near genes chrX 13430681 intergenic not near genes chrX_20_13430001 chrX_13430001 RAL-850 3788 chrX 13442436 13442509 chrX 13442647 13442720 25 210 5.5 9.0 7.2 3.0 284 chrX 13442436 intergenic not near genes chrX 13442578 intergenic not near genes chrX 13442720 intergenic not near genes chrX_25_13440001 chrX_13440001 RAL-850 3789 chrX 13443365 13443416 chrX 13443492 13443543 19 123 14.0 16.5 15.2 1.2 178 chrX 13443365 intergenic not near genes chrX 13443454 intergenic not near genes chrX 13443543 intergenic not near genes chrX_19_13440001 chrX_13440001 RAL-850 3790 chrX 13463608 13463676 chrX 13469235 13469303 mdg3 13 5627 8.5 6.0 7.2 1.6 5695 chrX 13463608 intron Neto + chrX 13466456 intron Neto + chrX 13469303 intron Neto + chrX_13_13465001 chrX_13465001 RAL-850 3791 chrX 13550437 13550483 chrX 13550569 13550611 17 132 6.0 0.0 3.0 4.2 174 chrX 13550437 intergenic not near genes chrX 13550524 intergenic not near genes chrX 13550611 intergenic not near genes chrX_17_13550001 chrX_13550001 RAL-850 3792 chrX 13659767 13659798 chrX 13659904 13659935 14 137 6.5 15.0 10.8 1.2 168 chrX 13659767 intron NFAT + chrX 13659851 intron NFAT + chrX 13659935 intron NFAT + chrX_14_13655001 chrX_13655001 RAL-850 3793 chrX 13807840 13807893 chrX 13807966 13808018 7 123 6.5 14.0 10.2 0.6 178 chrX 13807840 intron inaE + chrX 13807929 intron inaE + chrX 13808018 intron inaE + chrX_7_13805001 chrX_13805001 RAL-850 3794 chrX 13821422 13821472 chrX 13821549 13821598 17 121 2.5 8.0 5.2 2.7 176 chrX 13821422 intron Clic - chrX 13821510 intron Clic - chrX 13821598 intron Clic - chrX_17_13820001 chrX_13820001 RAL-850 3795 chrX 13875910 13875935 chrX 13876039 13876064 10 128 8.0 0.0 4.0 2.0 154 chrX 13875910 intron mamo - chrX 13875987 intron mamo - chrX 13876064 intron mamo - chrX_10_13875001 chrX_13875001 RAL-850 3796 chrX 13908764 13908775 chrX 13908877 13908892 7 121 10.0 12.5 11.2 0.6 128 chrX 13908764 intron mamo - chrX 13908828 intron mamo - chrX 13908892 intron mamo - chrX_7_13905001 chrX_13905001 RAL-850 3797 chrX 13934271 13934305 chrX 13934404 13934438 16 133 6.0 8.5 7.2 2.0 167 chrX 13934271 intron mamo - chrX 13934354 intron mamo - chrX 13934438 intron mamo - chrX_16_13930001 chrX_13930001 RAL-850 3798 chrX 13935478 13935501 chrX 13935611 13935634 11 133 12.5 11.0 11.8 0.9 156 chrX 13935478 intron mamo - chrX 13935556 intron mamo - chrX 13935634 intron mamo - chrX_11_13935001 chrX_13935001 RAL-850 3799 chrX 13935502 13935525 chrX 13935605 13935653 10 130 6.5 10.0 8.2 1.1 151 chrX 13935502 intron mamo - chrX 13935578 intron mamo - chrX 13935653 intron mamo - chrX_10_13935001 chrX_13935001 RAL-850 3800 chrX 13937920 13938005 chrX 13941250 13941305 I-element 10 3320 0.5 4.5 2.5 2.9 3385 chrX 13937920 intron mamo - chrX 13939612 intron mamo - chrX 13941305 intron mamo - chrX_10_13935001 chrX_13935001 RAL-850 3801 chrX 13943277 13943299 chrX 13943418 13943419 11 136 0.0 11.0 5.5 1.7 142 chrX 13943277 intron mamo - chrX 13943348 intron mamo - chrX 13943419 intron mamo - chrX_11_13940001 chrX_13940001 RAL-850 3802 chrX 13975825 13975892 chrX 13975953 13975994 5 122 0.0 8.5 4.2 1.0 169 chrX 13975825 intron mamo - chrX 13975910 intron mamo - chrX 13975994 intron mamo - chrX_5_13975001 chrX_13975001 RAL-850 3803 chrX 14030705 14030724 chrX 14035342 14035361 copia 8 4637 9.0 5.5 7.2 1.0 4656 chrX 14030705 intergenic not near genes chrX 14033033 intergenic not near genes chrX 14035361 intergenic not near genes chrX_8_14030001 chrX_14030001 RAL-850 3804 chrX 14104996 14105050 chrX 14114173 14114231 roo 25 9195 7.0 4.0 5.5 3.8 9235 chrX 14104996 intergenic not near genes chrX 14109614 intergenic not near genes chrX 14114231 5` UTR CR44657 + chrX_25_14105001 chrX_14105001 RAL-850 3805 chrX 14131429 14131514 chrX 14131567 14131633 23 126 6.0 8.0 7.0 2.9 204 chrX 14131429 intergenic not near genes chrX 14131531 intergenic not near genes chrX 14131633 intergenic not near genes chrX_23_14130001 chrX_14130001 RAL-850 3806 chrX 14157549 14157617 chrX 14163256 14163324 297 5 5707 4.0 5.5 4.8 0.9 5775 chrX 14157549 intergenic not near genes chrX 14160436 intergenic not near genes chrX 14163324 intergenic not near genes chrX_5_14160001 chrX_14160001 RAL-850 3807 chrX 14167374 14167430 chrX 14167519 14167575 9 145 5.5 10.5 8.0 1.0 201 chrX 14167374 intergenic not near genes chrX 14167474 intergenic not near genes chrX 14167575 intergenic not near genes chrX_9_14165001 chrX_14165001 RAL-850 3808 chrX 14173232 14173295 chrX 14173403 14173466 33 171 7.5 6.5 7.0 4.1 234 chrX 14173232 intergenic not near genes chrX 14173349 intergenic not near genes chrX 14173466 intergenic not near genes chrX_33_14170001 chrX_14170001 RAL-850 3809 chrX 14209414 14209485 chrX 14209555 14209626 29 140 5.5 5.0 5.2 4.7 212 chrX 14209414 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209520 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209626 intron,intron l(1)G0007 +,l(1)G0469 - chrX_29_14205001 chrX_14205001 RAL-850 3810 chrX 14324363 14324423 chrX 14325057 14325117 16 692 4.5 0.5 2.5 4.6 754 chrX 14324363 intron dpr8 + chrX 14324740 intron dpr8 + chrX 14325117 intron dpr8 + chrX_16_14320001 chrX_14320001 RAL-850 3811 chrX 14333267 14333279 chrX 14333395 14333411 4 130 7.0 9.5 8.2 0.4 144 chrX 14333267 intron dpr8 + chrX 14333339 intron dpr8 + chrX 14333411 intron dpr8 + chrX_4_14330001 chrX_14330001 RAL-850 3812 chrX 14333281 14333305 chrX 14333392 14333424 10 119 4.0 7.5 5.8 1.5 143 chrX 14333281 intron dpr8 + chrX 14333352 intron dpr8 + chrX 14333424 intron dpr8 + chrX_10_14330001 chrX_14330001 RAL-850 3813 chrX 14401504 14401572 chrX 14401663 14401730 15 158 2.0 5.0 3.5 3.3 226 chrX 14401504 intron dpr8 + chrX 14401617 intron dpr8 + chrX 14401730 intron dpr8 + chrX_15_14400001 chrX_14400001 RAL-850 3814 chrX 14404970 14405025 chrX 14405098 14405153 16 127 6.5 4.5 5.5 2.5 183 chrX 14404970 intron dpr8 + chrX 14405062 intron dpr8 + chrX 14405153 intron dpr8 + chrX_16_14405001 chrX_14405001 RAL-850 3815 chrX 14411968 14411993 chrX 14412099 14412124 12 128 14.0 24.5 19.2 0.6 156 chrX 14411968 intron dpr8 + chrX 14412046 intron dpr8 + chrX 14412124 intron dpr8 + chrX_12_14410001 chrX_14410001 RAL-850 3816 chrX 14416269 14416320 chrX 14421087 14421138 F-element 12 4818 7.0 6.5 6.8 1.5 4869 chrX 14416269 intron dpr8 + chrX 14418704 intron dpr8 + chrX 14421138 intron dpr8 + chrX_12_14415001 chrX_14415001 RAL-850 3817 chrX 14484925 14484984 chrX 14485064 14485123 18 138 0.0 3.5 1.8 6.4 198 chrX 14484925 intergenic not near genes chrX 14485024 intergenic not near genes chrX 14485123 intergenic not near genes chrX_18_14485001 chrX_14485001 RAL-850 3818 chrX 14597686 14597751 chrX 14597813 14597878 27 125 10.0 5.5 7.8 3.1 192 chrX 14597686 intron CG9413 - chrX 14597782 intron CG9413 - chrX 14597878 intron CG9413 - chrX_27_14595001 chrX_14595001 RAL-850 3819 chrX 14636419 14636476 chrX 14641910 14641934 I-element 19 5487 10.0 9.0 9.5 1.8 5515 chrX 14636419 intron NetA - chrX 14639176 intron NetA - chrX 14641934 intron NetA - chrX_19_14635001 chrX_14635001 RAL-850 3820 chrX 14713993 14714064 chrX 14714125 14714196 19 131 5.5 10.0 7.8 2.2 203 chrX 14713993 intron NetB - chrX 14714094 intron NetB - chrX 14714196 intron NetB - chrX_19_14710001 chrX_14710001 RAL-850 3821 chrX 14767894 14767954 chrX 14768024 14768084 22 128 9.0 1.0 5.0 3.7 190 chrX 14767894 intergenic not near genes chrX 14767989 intergenic not near genes chrX 14768084 intergenic not near genes chrX_22_14765001 chrX_14765001 RAL-850 3822 chrX 14777992 14778047 chrX 14782839 14782894 Doc 21 4847 6.5 7.0 6.8 2.7 4902 chrX 14777992 intergenic CG5347 + chrX 14780443 intergenic not near genes chrX 14782894 intergenic Ag5r2 - chrX_21_14780001 chrX_14780001 RAL-850 3823 chrX 14784115 14784184 chrX 14784275 14784344 31 160 8.5 9.0 8.8 3.2 229 chrX 14784115 intergenic Ag5r2 - chrX 14784230 intergenic Ag5r2 -,Ag5r - chrX 14784344 intergenic Ag5r2 -,Ag5r - chrX_31_14780001 chrX_14780001 RAL-850 3824 chrX 14810163 14810174 chrX 14810291 14810302 5 128 8.0 13.0 10.5 0.4 139 chrX 14810163 intron rut - chrX 14810232 intron rut - chrX 14810302 intron rut - chrX_5_14810001 chrX_14810001 RAL-850 3825 chrX 14818717 14818795 chrX 14823971 14823992 copia 29 5249 8.0 6.5 7.2 3.5 5275 chrX 14818717 intron rut - chrX 14821354 intron rut - chrX 14823992 intron rut - chrX_29_14820001 chrX_14820001 RAL-850 3826 chrX 14825311 14825378 chrX 14825438 14825490 18 114 9.0 7.5 8.2 2.0 179 chrX 14825311 intron rut - chrX 14825400 intron rut - chrX 14825490 intron rut - chrX_18_14825001 chrX_14825001 RAL-850 3827 chrX 14875009 14875066 chrX 14875142 14875199 11 132 0.0 5.0 2.5 3.1 190 chrX 14875009 intron Flo2 + chrX 14875104 intron Flo2 + chrX 14875199 intron Flo2 + chrX_11_14875001 chrX_14875001 RAL-850 3828 chrX 14883565 14883625 chrX 14883691 14883751 4 126 5.0 6.0 5.5 0.6 186 chrX 14883565 intron Flo2 + chrX 14883658 intron Flo2 + chrX 14883751 intron Flo2 + chrX_4_14880001 chrX_14880001 RAL-850 3829 chrX 14936822 14936883 chrX 14946129 14946190 roo 20 9307 4.5 7.0 5.8 2.9 9368 chrX 14936822 intron pdgy - chrX 14941506 intron pdgy - chrX 14946190 intron pdgy - chrX_20_14940001 chrX_14940001 RAL-850 3830 chrX 14950021 14950028 chrX 14950148 14950150 5 126 15.5 1.5 8.5 0.5 129 chrX 14950021 intron pdgy - chrX 14950086 intron pdgy - chrX 14950150 intron pdgy - chrX_5_14950001 chrX_14950001 RAL-850 3831 chrX 14960344 14960411 chrX 14960535 14960602 24 191 6.5 3.0 4.8 4.1 258 chrX 14960344 intron eag + chrX 14960473 intron eag + chrX 14960602 intron eag + chrX_24_14960001 chrX_14960001 RAL-850 3832 chrX 14981683 14981736 chrX 14981812 14981865 15 129 5.5 8.5 7.0 1.9 182 chrX 14981683 intron eag + chrX 14981774 intron eag + chrX 14981865 intron eag + chrX_15_14980001 chrX_14980001 RAL-850 3833 chrX 14991739 14991745 chrX 14991867 14991873 7 128 24.5 7.0 15.8 0.4 134 chrX 14991739 intron eag + chrX 14991806 intron eag + chrX 14991873 intron eag + chrX_7_14990001 chrX_14990001 RAL-850 3834 chrX 14991747 14991804 chrX 14991864 14991932 24 127 11.0 7.0 9.0 2.4 185 chrX 14991747 intron eag + chrX 14991840 intron eag + chrX 14991932 intron eag + chrX_24_14990001 chrX_14990001 RAL-850 3835 chrX 15059123 15059163 chrX 15059279 15059319 12 155 13.0 3.0 8.0 1.3 196 chrX 15059123 exon hiw - chrX 15059221 intron hiw - chrX 15059319 intron hiw - chrX_12_15055001 chrX_15055001 RAL-850 3836 chrX 15062481 15062504 chrX 15062629 15062652 4 146 9.0 13.0 11.0 0.3 171 chrX 15062481 intron hiw - chrX 15062566 intron hiw - chrX 15062652 intron hiw - chrX_4_15060001 chrX_15060001 RAL-850 3837 chrX 15070132 15070309 chrX 15070275 15070455 27 143 0.0 0.0 0.0 27.0 323 chrX 15070132 3` UTR Lsd-2 - chrX 15070294 3` UTR Lsd-2 - chrX 15070455 3` UTR Lsd-2 - chrX_27_15070001 chrX_15070001 RAL-850 3838 chrX 15168689 15168750 chrX 15168828 15168889 8 139 0.0 7.0 3.5 1.8 200 chrX 15168689 intergenic not near genes chrX 15168789 intergenic not near genes chrX 15168889 intergenic not near genes chrX_8_15165001 chrX_15165001 RAL-850 3839 chrX 15228455 15228524 chrX 15228751 15228820 23 296 6.5 4.5 5.5 3.5 365 chrX 15228455 intergenic CG9101 - chrX 15228638 intergenic CG9101 - chrX 15228820 3` UTR CG9101 - chrX_23_15225001 chrX_15225001 RAL-850 3840 chrX 15247943 15248237 chrX 15248071 15248363 6 126 15.0 16.0 15.5 0.4 420 chrX 15247943 intergenic not near genes chrX 15248153 intergenic not near genes chrX 15248363 intergenic not near genes chrX_6_15245001 chrX_15245001 RAL-850 3841 chrX 15265833 15265868 chrX 15265960 15265995 8 124 15.0 14.5 14.8 0.5 162 chrX 15265833 intergenic not near genes chrX 15265914 intergenic not near genes chrX 15265995 intergenic not near genes chrX_8_15265001 chrX_15265001 RAL-850 3842 chrX 15273666 15273699 chrX 15274883 15274916 1360 15 1210 19.5 10.5 15.0 0.9 1250 chrX 15273666 intergenic not near genes chrX 15274291 intergenic not near genes chrX 15274916 intergenic not near genes chrX_15_15270001 chrX_15270001 RAL-850 3843 chrX 15273707 15273728 chrX 15274879 15274939 1360 7 1203 14.0 9.5 11.8 0.5 1232 chrX 15273707 intergenic not near genes chrX 15274323 intergenic not near genes chrX 15274939 intergenic not near genes chrX_7_15270001 chrX_15270001 RAL-850 3844 chrX 15276631 15276689 chrX 15276760 15276833 25 137 4.0 7.5 5.8 3.7 202 chrX 15276631 intergenic not near genes chrX 15276732 intergenic not near genes chrX 15276833 intergenic not near genes chrX_25_15275001 chrX_15275001 RAL-850 3845 chrX 15326683 15326718 chrX 15326931 15326966 I-element 5 248 0.5 2.5 1.5 2.0 283 chrX 15326683 3` UTR Top1 + chrX 15326824 3` UTR Top1 + chrX 15326966 3` UTR Top1 + chrX_5_15325001 chrX_15325001 RAL-850 3846 chrX 15413022 15413028 chrX 15417365 15417379 Juan 7 4350 17.0 10.0 13.5 0.5 4357 chrX 15413022 intron Cngl - chrX 15415200 intron Cngl - chrX 15417379 intron Cngl - chrX_7_15415001 chrX_15415001 RAL-850 3847 chrX 15413032 15413072 chrX 15417359 15417401 Juan 17 4345 8.5 8.5 8.5 1.8 4369 chrX 15413032 intron Cngl - chrX 15415216 intron Cngl - chrX 15417401 intron Cngl - chrX_17_15415001 chrX_15415001 RAL-850 3848 chrX 15435690 15435697 chrX 15436173 15436180 rover 4 483 0.0 14.5 7.2 0.5 490 chrX 15435690 intron Cngl - chrX 15435935 intron Cngl - chrX 15436180 intron Cngl - chrX_4_15435001 chrX_15435001 RAL-850 3849 chrX 15536659 15536702 chrX 15536780 15536829 24 126 14.5 16.5 15.5 1.5 170 chrX 15536659 intron Ac13E - chrX 15536744 intron Ac13E - chrX 15536829 intron Ac13E - chrX_24_15535001 chrX_15535001 RAL-850 3850 chrX 15565586 15565659 chrX 15565722 15565795 24 136 8.5 4.0 6.2 3.3 209 chrX 15565586 intergenic not near genes chrX 15565690 intergenic not near genes chrX 15565795 intergenic not near genes chrX_24_15565001 chrX_15565001 RAL-850 3851 chrX 15666183 15666229 chrX 15666309 15666356 18 124 2.5 15.5 9.0 1.8 173 chrX 15666183 intergenic CR43299 - chrX 15666270 intergenic not near genes chrX 15666356 intergenic not near genes chrX_18_15665001 chrX_15665001 RAL-850 3852 chrX 8407457 8407461 chrX 15785702 15785706 6 7378245 14.0 32.5 23.2 0.2 7378249 chrX 8407457 intergenic CG11190 - chrX 12096582 intron,intron CR43960 +,Ten-a + chrX 15785706 intergenic Paf-AHalpha -,mRpS30 + chrX_6_12095001 chrX_12095001 RAL-850 3853 chrX 15817558 15817607 chrX 15817776 15817810 24 217 10.0 11.0 10.5 2.1 252 chrX 15817558 intron sd + chrX 15817684 intron sd + chrX 15817810 intron sd + chrX_24_15815001 chrX_15815001 RAL-850 3854 chrX 15876868 15876876 chrX 15877019 15877027 5 151 18.0 19.0 18.5 0.3 159 chrX 15876868 3` UTR tay - chrX 15876948 3` UTR tay - chrX 15877027 3` UTR tay - chrX_5_15875001 chrX_15875001 RAL-850 3855 chrX 15898393 15898461 chrX 15898597 15898666 22 204 4.5 4.0 4.2 4.2 273 chrX 15898393 intron shi + chrX 15898530 intron shi + chrX 15898666 intron shi + chrX_22_15895001 chrX_15895001 RAL-850 3856 chrX 15939220 15939291 chrX 15939355 15939421 16 135 5.5 6.5 6.0 2.3 201 chrX 15939220 5` UTR Stim - chrX 15939320 intron Stim - chrX 15939421 intron Stim - chrX_16_15935001 chrX_15935001 RAL-850 3857 chrX 15970874 15970910 chrX 15971002 15971036 7 127 0.5 9.0 4.8 1.2 162 chrX 15970874 intron mmd - chrX 15970955 intron mmd - chrX 15971036 intron mmd - chrX_7_15970001 chrX_15970001 RAL-850 3858 chrX 16100507 16100588 chrX 16100636 16100706 18 128 5.0 5.0 5.0 3.0 199 chrX 16100507 intron,intron CG42353 -,CG42354 - chrX 16100606 intron,intron CG42353 -,CG42354 - chrX 16100706 intron,intron CG42353 -,CG42354 - chrX_18_16100001 chrX_16100001 RAL-850 3859 chrX 16160249 16160302 chrX 16160375 16160428 10 126 12.0 7.0 9.5 1.0 179 chrX 16160249 intergenic not near genes chrX 16160338 intergenic not near genes chrX 16160428 intergenic not near genes chrX_10_16160001 chrX_16160001 RAL-850 3860 chrX 16180549 16180581 chrX 16180676 16180708 21 126 9.5 6.5 8.0 2.3 159 chrX 16180549 intergenic not near genes chrX 16180628 intergenic not near genes chrX 16180708 intergenic not near genes chrX_21_16180001 chrX_16180001 RAL-850 3861 chrX 16222738 16222804 chrX 16231138 16231204 roo 19 8399 3.5 3.5 3.5 4.2 8466 chrX 16222738 intergenic not near genes chrX 16226971 intergenic not near genes chrX 16231204 intergenic not near genes chrX_19_16225001 chrX_16225001 RAL-850 3862 chrX 16253829 16253858 chrX 16253966 16253995 8 135 0.0 8.0 4.0 1.6 166 chrX 16253829 intergenic snRNA:U5:14B - chrX 16253912 intergenic snRNA:U5:14B - chrX 16253995 intergenic snRNA:U5:14B - chrX_8_16250001 chrX_16250001 RAL-850 3863 chrX 16295487 16295548 chrX 16295621 16295676 7 132 3.0 0.0 1.5 2.8 189 chrX 16295487 intron CG9911 - chrX 16295582 intron CG9911 - chrX 16295676 intron CG9911 - chrX_7_16295001 chrX_16295001 RAL-850 3864 chrX 16329357 16329445 chrX 16329504 16329571 20 135 0.0 5.5 2.8 5.3 214 chrX 16329357 exon CG9919 - chrX 16329464 intron CG9919 - chrX 16329571 exon CG9919 - chrX_20_16325001 chrX_16325001 RAL-850 3865 chrX 16340626 16340689 chrX 16349833 16349896 roo 23 9207 8.5 4.5 6.5 3.1 9270 chrX 16340626 intergenic Dsp1 + chrX 16345261 intergenic not near genes chrX 16349896 intergenic sl + chrX_23_16345001 chrX_16345001 RAL-850 3866 chrX 16492602 16492677 chrX 16498229 16498279 mdg3 23 5626 8.5 9.5 9.0 2.3 5677 chrX 16492602 intron para - chrX 16495440 intron para - chrX 16498279 exon para - chrX_23_16495001 chrX_16495001 RAL-850 3867 chrX 16515000 16515061 chrX 16515149 16515210 24 148 5.0 10.0 7.5 2.8 210 chrX 16515000 intron para - chrX 16515105 intron para - chrX 16515210 intron para - chrX_24_16515001 chrX_16515001 RAL-850 3868 chrX 16519890 16519961 chrX 16520025 16520097 30 136 0.5 7.0 3.8 6.2 207 chrX 16519890 intron para - chrX 16519994 intron para - chrX 16520097 intron para - chrX_30_16515001 chrX_16515001 RAL-850 3869 chrX 7978952 7978952 chrX 16525727 16525778 5 8546799 37.0 12.0 24.5 0.2 8546826 chrX 7978952 intron sn + chrX 12252365 intron Ten-a + chrX 16525778 intron para - chrX_5_12250001 chrX_12250001 RAL-850 3870 chrX 16539052 16539082 chrX 16539201 16539231 8 149 9.0 1.5 5.2 1.3 179 chrX 16539052 intergenic CG9903 - chrX 16539142 intergenic CG9903 - chrX 16539231 3` UTR CG9903 - chrX_8_16535001 chrX_16535001 RAL-850 3871 chrX 16569663 16569688 chrX 16569794 16569819 14 129 14.5 13.5 14.0 0.9 156 chrX 16569663 intron CanA-14F - chrX 16569741 intron CanA-14F - chrX 16569819 intron CanA-14F - chrX_14_16565001 chrX_16565001 RAL-850 3872 chrX 16650889 16650960 chrX 16651016 16651089 14 128 5.5 0.0 2.8 3.7 200 chrX 16650889 intergenic CG32573 +,CG42512 + chrX 16650989 intergenic CG32573 +,CG42512 + chrX 16651089 intergenic CG32573 +,CG42512 + chrX_14_16650001 chrX_16650001 RAL-850 3873 chrX 16674709 16674726 chrX 16674872 16674889 9 163 17.5 9.5 13.5 0.6 180 chrX 16674709 intron CG13012 - chrX 16674799 intron CG13012 - chrX 16674889 intron CG13012 - chrX_9_16670001 chrX_16670001 RAL-850 3874 chrX 16674732 16674785 chrX 16674895 16674948 22 162 8.0 13.5 10.8 1.9 216 chrX 16674732 intron CG13012 - chrX 16674840 intron CG13012 - chrX 16674948 intron CG13012 - chrX_22_16670001 chrX_16670001 RAL-850 3875 chrX 16689576 16689649 chrX 16689712 16689785 20 132 6.0 10.0 8.0 2.2 209 chrX 16689576 intron Sep4 - chrX 16689680 intron Sep4 - chrX 16689785 intron Sep4 - chrX_20_16685001 chrX_16685001 RAL-850 3876 chrX 16764687 16764704 chrX 16764814 16764831 6 127 14.0 0.0 7.0 0.8 144 chrX 16764687 intron if - chrX 16764759 intron if - chrX 16764831 intron if - chrX_6_16760001 chrX_16760001 RAL-850 3877 chrX 16821188 16821264 chrX 16821318 16821394 26 129 5.0 7.5 6.2 3.6 206 chrX 16821188 intron CG4829 + chrX 16821291 intron CG4829 + chrX 16821394 intron CG4829 + chrX_26_16820001 chrX_16820001 RAL-850 3878 chrX 16833165 16833221 chrX 16833298 16833356 10 130 11.5 5.0 8.2 1.1 191 chrX 16833165 intron CG13004 - chrX 16833260 intron CG13004 - chrX 16833356 intron CG13004 - chrX_10_16830001 chrX_16830001 RAL-850 3879 chrX 16870031 16870098 chrX 16870163 16870230 27 132 7.0 6.5 6.8 3.5 199 chrX 16870031 intron CG13003 - chrX 16870130 intron CG13003 - chrX 16870230 intron CG13003 - chrX_27_16870001 chrX_16870001 RAL-850 3880 chrX 16873999 16874007 chrX 16874125 16874133 6 126 5.5 6.0 5.8 0.9 134 chrX 16873999 intron CG13003 - chrX 16874066 intron CG13003 - chrX 16874133 intron CG13003 - chrX_6_16870001 chrX_16870001 RAL-850 3881 chrX 16906598 16906661 chrX 16906735 16906798 18 137 0.0 12.0 6.0 2.6 200 chrX 16906598 intron CR44754 - chrX 16906698 intron CR44754 - chrX 16906798 intron CR44754 - chrX_18_16905001 chrX_16905001 RAL-850 3882 chrX 16935964 16936007 chrX 16936432 16936475 jockey 15 468 12.5 6.5 9.5 1.4 511 chrX 16935964 intron CG4928 + chrX 16936220 intron CG4928 + chrX 16936475 intron CG4928 + chrX_15_16935001 chrX_16935001 RAL-850 3883 chrX 17011923 17011989 chrX 17012056 17012122 24 126 3.5 7.0 5.2 3.9 199 chrX 17011923 intron CG45002 - chrX 17012022 intron CG45002 - chrX 17012122 intron CG45002 - chrX_24_17010001 chrX_17010001 RAL-850 3884 chrX 17057894 17057948 chrX 17058185 17058239 pogo 5 291 2.5 5.0 3.8 1.0 345 chrX 17057894 intron CG45002 - chrX 17058066 intron CG45002 - chrX 17058239 intron CG45002 - chrX_5_17055001 chrX_17055001 RAL-850 3885 chrX 17088132 17088198 chrX 17088775 17088841 6 643 1.5 5.5 3.5 1.3 709 chrX 17088132 intergenic CG8945 - chrX 17088486 intergenic not near genes chrX 17088841 intergenic not near genes chrX_6_17085001 chrX_17085001 RAL-850 3886 chrX 17100122 17100173 chrX 17100284 17100335 16 161 9.5 3.0 6.2 2.2 213 chrX 17100122 intron CG4991 + chrX 17100228 intron CG4991 + chrX 17100335 intron CG4991 + chrX_16_17100001 chrX_17100001 RAL-850 3887 chrX 17195167 17195191 chrX 17200302 17200325 flea 4 5134 11.5 6.0 8.8 0.4 5158 chrX 17195167 3` UTR baz + chrX 17197746 3` UTR baz + chrX 17200325 3` UTR baz + chrX_4_17195001 chrX_17195001 RAL-850 3888 chrX 17195198 17195231 chrX 17200299 17200365 flea 10 5130 8.0 4.5 6.2 1.4 5167 chrX 17195198 3` UTR baz + chrX 17197782 3` UTR baz + chrX 17200365 3` UTR baz + chrX_10_17195001 chrX_17195001 RAL-850 3889 chrX 17205801 17205857 chrX 17205941 17205997 18 139 8.5 10.0 9.2 1.8 196 chrX 17205801 intergenic not near genes chrX 17205899 intergenic not near genes chrX 17205997 intergenic CG32564 + chrX_18_17205001 chrX_17205001 RAL-850 3890 chrX 17221792 17221848 chrX 17221928 17221984 14 136 3.0 9.5 6.2 1.9 192 chrX 17221792 intron CG5172 + chrX 17221888 intron CG5172 + chrX 17221984 intron CG5172 + chrX_14_17220001 chrX_17220001 RAL-850 3891 chrX 17229908 17229963 chrX 17230061 17230115 19 153 9.0 4.0 6.5 2.5 207 chrX 17229908 intergenic CG10597 - chrX 17230012 intergenic CG10597 - chrX 17230115 intergenic CG10597 - chrX_19_17230001 chrX_17230001 RAL-850 3892 chrX 17316334 17316358 chrX 17316468 17316492 10 134 9.0 0.5 4.8 1.7 158 chrX 17316334 intron B-H2 + chrX 17316413 intron B-H2 + chrX 17316492 intron B-H2 + chrX_10_17315001 chrX_17315001 RAL-850 3893 chrX 17431314 17431335 chrX 17431705 17431726 jockey 4 389 12.0 7.5 9.8 0.4 412 chrX 17431314 intron CG12994 - chrX 17431520 intron CG12994 - chrX 17431726 intron CG12994 - chrX_4_17430001 chrX_17430001 RAL-850 3894 chrX 17457532 17457608 chrX 17457665 17457741 29 132 5.5 5.0 5.2 4.7 209 chrX 17457532 3` UTR CG43658 - chrX 17457636 3` UTR CG43658 - chrX 17457741 3` UTR CG43658 - chrX_29_17455001 chrX_17455001 RAL-850 3895 chrX 17544972 17545031 chrX 17545104 17545163 12 131 5.0 4.5 4.8 2.1 191 chrX 17544972 intron CG43658 - chrX 17545068 intron CG43658 - chrX 17545163 intron CG43658 - chrX_12_17545001 chrX_17545001 RAL-850 3896 chrX 17695838 17695850 chrX 17695936 17695977 6 122 6.5 12.0 9.2 0.6 139 chrX 17695838 intron chas - chrX 17695908 intron chas - chrX 17695977 intron chas - chrX_6_17695001 chrX_17695001 RAL-850 3897 chrX 17766329 17766378 chrX 17766456 17766519 9 142 6.5 5.0 5.8 1.3 190 chrX 17766329 intergenic not near genes chrX 17766424 intergenic not near genes chrX 17766519 intergenic not near genes chrX_9_17765001 chrX_17765001 RAL-850 3898 chrX 17782185 17782241 chrX 17782333 17782389 19 148 4.0 6.0 5.0 3.2 204 chrX 17782185 intergenic not near genes chrX 17782287 intergenic not near genes chrX 17782389 intergenic not near genes chrX_19_17780001 chrX_17780001 RAL-850 3899 chrX 17792771 17792808 chrX 17796392 17796459 flea 15 3641 10.0 6.0 8.0 1.7 3688 chrX 17792771 intron OdsH + chrX 17794615 intron OdsH + chrX 17796459 intron OdsH + chrX_15_17790001 chrX_17790001 RAL-850 3900 chrX 17968853 17968918 chrX 17969022 17969086 16 168 6.5 5.0 5.8 2.4 233 chrX 17968853 intron Sh - chrX 17968970 intron Sh - chrX 17969086 intron Sh - chrX_16_17965001 chrX_17965001 RAL-850 3901 chrX 18003411 18003458 chrX 18003543 18003590 16 132 10.0 0.5 5.2 2.6 179 chrX 18003411 intron Sh - chrX 18003500 intron Sh - chrX 18003590 intron Sh - chrX_16_18000001 chrX_18000001 RAL-850 3902 chrX 18020772 18020825 chrX 18020909 18020956 13 137 5.5 4.0 4.8 2.2 184 chrX 18020772 intron Sh - chrX 18020864 intron Sh - chrX 18020956 intron Sh - chrX_13_18020001 chrX_18020001 RAL-850 3903 chrX 18029143 18029183 chrX 18029274 18029314 16 130 7.0 0.0 3.5 3.6 171 chrX 18029143 intron Sh - chrX 18029228 intron Sh - chrX 18029314 intron Sh - chrX_16_18025001 chrX_18025001 RAL-850 3904 chrX 18040382 18040452 chrX 18040520 18040590 13 138 7.5 6.0 6.8 1.7 208 chrX 18040382 5` UTR Sh - chrX 18040486 intron Sh - chrX 18040590 intron Sh - chrX_13_18040001 chrX_18040001 RAL-850 3905 chrX 18126555 18126837 chrX 18126728 18126964 50 152 6.0 6.0 6.0 7.1 409 chrX 18126555 intron CG32553 - chrX 18126760 intron CG32553 - chrX 18126964 5` UTR CG32553 - chrX_50_18125001 chrX_18125001 RAL-850 3906 chrX 18148592 18148625 chrX 18148745 18148778 7 153 3.5 6.0 4.8 1.2 186 chrX 18148592 intergenic not near genes chrX 18148685 intergenic not near genes chrX 18148778 intergenic not near genes chrX_7_18145001 chrX_18145001 RAL-850 3907 chrX 18175456 18175477 chrX 18175590 18175612 8 134 0.0 7.0 3.5 1.8 156 chrX 18175456 intergenic not near genes chrX 18175534 intergenic not near genes chrX 18175612 intergenic not near genes chrX_8_18175001 chrX_18175001 RAL-850 3908 chrX 18194025 18194090 chrX 18194610 18194675 BS 36 585 13.0 6.5 9.8 3.3 650 chrX 18194025 intron Frq2 + chrX 18194350 intron Frq2 + chrX 18194675 intron Frq2 + chrX_36_18190001 chrX_18190001 RAL-850 3909 chrX 18218020 18218065 chrX 18218187 18218232 18 167 8.5 17.5 13.0 1.3 212 chrX 18218020 intron CG33639 - chrX 18218126 intron CG33639 - chrX 18218232 intron CG33639 - chrX_18_18215001 chrX_18215001 RAL-850 3910 chrX 18256998 18257020 chrX 18257131 18257164 6 140 9.5 7.5 8.5 0.6 166 chrX 18256998 3` UTR CR45613 - chrX 18257081 3` UTR CR45613 - chrX 18257164 3` UTR CR45613 - chrX_6_18255001 chrX_18255001 RAL-850 3911 chrX 18257022 18257052 chrX 18257130 18257155 16 130 2.5 7.0 4.8 2.8 133 chrX 18257022 3` UTR CR45613 - chrX 18257088 3` UTR CR45613 - chrX 18257155 3` UTR CR45613 - chrX_16_18255001 chrX_18255001 RAL-850 3912 chrX 18320434 18320499 chrX 18320628 18320681 12 186 0.0 5.5 2.8 3.2 247 chrX 18320434 intron CG6023 - chrX 18320558 intron CG6023 - chrX 18320681 intron CG6023 - chrX_12_18320001 chrX_18320001 RAL-850 3913 chrX 18362937 18362944 chrX 18363064 18363071 6 127 0.0 3.5 1.8 2.1 134 chrX 18362937 intergenic CG6106 + chrX 18363004 intergenic CG6106 + chrX 18363071 intergenic not near genes chrX_6_18360001 chrX_18360001 RAL-850 3914 chrX 18429454 18429465 chrX 18434815 18434826 Transpac 8 5360 20.0 11.5 15.8 0.5 5372 chrX 18429454 intergenic not near genes chrX 18432140 intergenic not near genes chrX 18434826 intergenic not near genes chrX_8_18430001 chrX_18430001 RAL-850 3915 chrX 18429466 18429517 chrX 18434807 18434878 Transpac 11 5359 6.0 10.0 8.0 1.2 5412 chrX 18429466 intergenic not near genes chrX 18432172 intergenic not near genes chrX 18434878 intergenic not near genes chrX_11_18430001 chrX_18430001 RAL-850 3916 chrX 18467180 18467249 chrX 18467394 18467463 35 211 7.0 11.0 9.0 3.5 283 chrX 18467180 intron CG32547 - chrX 18467322 intron CG32547 - chrX 18467463 intron CG32547 - chrX_35_18465001 chrX_18465001 RAL-850 3917 chrX 18479849 18479867 chrX 18479981 18480004 8 135 3.0 16.0 9.5 0.8 155 chrX 18479849 intergenic Hayan -,CR45714 +,CG32547 - chrX 18479926 intergenic Hayan -,CR45714 +,CG32547 - chrX 18480004 3` UTR Hayan - chrX_8_18475001 chrX_18475001 RAL-850 3918 chrX 18486079 18486091 chrX 18486207 18486214 4 131 13.5 12.5 13.0 0.3 135 chrX 18486079 exon psh - chrX 18486146 5` UTR psh - chrX 18486214 intron psh - chrX_4_18485001 chrX_18485001 RAL-850 3919 chrX 18486092 18486135 chrX 18486204 18486274 21 130 8.0 12.0 10.0 1.9 182 chrX 18486092 exon psh - chrX 18486183 intron psh - chrX 18486274 intron psh - chrX_21_18485001 chrX_18485001 RAL-850 3920 chrX 18489995 18490053 chrX 18490200 18490257 14 202 11.0 4.0 7.5 1.6 262 chrX 18489995 intergenic CG15046 - chrX 18490126 intergenic not near genes chrX 18490257 intergenic not near genes chrX_14_18490001 chrX_18490001 RAL-850 3921 chrX 18529347 18529399 chrX 18529473 18529525 22 126 5.0 6.0 5.5 3.4 178 chrX 18529347 intron,3` UTR Bx +,CG15047 + chrX 18529436 intron,3` UTR Bx +,CG15047 + chrX 18529525 intron,3` UTR Bx +,CG15047 + chrX_22_18525001 chrX_18525001 RAL-850 3922 chrX 18543060 18543117 chrX 18543193 18543250 23 130 7.5 6.0 6.8 2.9 190 chrX 18543060 intron Bx + chrX 18543155 intron Bx + chrX 18543250 intron Bx + chrX_23_18540001 chrX_18540001 RAL-850 3923 chrX 18558727 18558799 chrX 18558858 18558929 20 131 3.5 7.5 5.5 3.1 202 chrX 18558727 intron Bx + chrX 18558828 intron Bx + chrX 18558929 intron Bx + chrX_20_18555001 chrX_18555001 RAL-850 3924 chrX 12946234 12946235 chrX 18572525 18572525 7 5626290 22.5 31.5 27.0 0.2 5626291 chrX 12946234 3` UTR fne + chrX 15759380 intron Graf - chrX 18572525 intergenic not near genes chrX_7_15755001 chrX_15755001 RAL-850 3925 chrX 18576076 18576102 chrX 18576204 18576230 12 128 4.5 2.0 3.2 2.9 154 chrX 18576076 intergenic not near genes chrX 18576153 intergenic not near genes chrX 18576230 intergenic not near genes chrX_12_18575001 chrX_18575001 RAL-850 3926 chrX 18644972 18645038 chrX 18645120 18645186 27 148 9.5 9.5 9.5 2.6 214 chrX 18644972 intron Rip11 - chrX 18645079 intron Rip11 - chrX 18645186 intron Rip11 - chrX_27_18645001 chrX_18645001 RAL-850 3927 chrX 18698797 18698878 chrX 18698964 18699045 28 167 6.0 9.5 7.8 3.2 248 chrX 18698797 intergenic not near genes chrX 18698921 intergenic not near genes chrX 18699045 intergenic not near genes chrX_28_18695001 chrX_18695001 RAL-850 3928 chrX 18749825 18749891 chrX 18749954 18750025 31 133 6.5 6.0 6.2 4.3 200 chrX 18749825 intergenic not near genes chrX 18749925 intergenic not near genes chrX 18750025 intergenic not near genes chrX_31_18745001 chrX_18745001 RAL-850 3929 chrX 18754301 18754341 chrX 18758018 18758041 297 9 3713 4.0 11.0 7.5 1.1 3740 chrX 18754301 intergenic not near genes chrX 18756171 intergenic not near genes chrX 18758041 intergenic not near genes chrX_9_18755001 chrX_18755001 RAL-850 3930 chrX 18771846 18771853 chrX 18772252 18772269 6 414 18.0 7.5 12.8 0.4 423 chrX 18771846 intron CCKLR-17D3 - chrX 18772058 intron CCKLR-17D3 - chrX 18772269 intron CCKLR-17D3 - chrX_6_18770001 chrX_18770001 RAL-850 3931 chrX 18896482 18896538 chrX 18896643 18896699 15 161 4.5 6.5 5.5 2.3 217 chrX 18896482 3` UTR CG7349 + chrX 18896590 intergenic CG7349 + chrX 18896699 intergenic CG7349 + chrX_15_18895001 chrX_18895001 RAL-850 3932 chrX 18957029 18957088 chrX 18965742 18965784 roo 12 8712 7.5 4.0 5.8 1.8 8755 chrX 18957029 intron CG43759 + chrX 18961406 intron CG43759 + chrX 18965784 intron CG43759 + chrX_12_18960001 chrX_18960001 RAL-850 3933 chrX 18988257 18988526 chrX 18988464 18988665 16 181 0.0 0.0 0.0 16.0 408 chrX 18988257 intron CG43759 + chrX 18988461 intron CG43759 + chrX 18988665 intron CG43759 + chrX_16_18985001 chrX_18985001 RAL-850 3934 chrX 19036390 19036398 chrX 19036516 19036524 8 126 4.5 0.0 2.2 2.5 134 chrX 19036390 intergenic not near genes chrX 19036457 intergenic not near genes chrX 19036524 intergenic not near genes chrX_8_19035001 chrX_19035001 RAL-850 3935 chrX 19039009 19039037 chrX 19039159 19039189 8 153 8.0 6.5 7.2 1.0 180 chrX 19039009 intergenic not near genes chrX 19039099 intergenic not near genes chrX 19039189 intergenic not near genes chrX_8_19035001 chrX_19035001 RAL-850 3936 chrX 19039045 19039047 chrX 19039199 19039202 4 154 6.0 13.0 9.5 0.4 157 chrX 19039045 intergenic not near genes chrX 19039124 intergenic not near genes chrX 19039202 intergenic not near genes chrX_4_19035001 chrX_19035001 RAL-850 3937 chrX 19047069 19047139 chrX 19047195 19047242 14 124 5.5 6.0 5.8 2.1 173 chrX 19047069 intergenic not near genes chrX 19047156 intergenic not near genes chrX 19047242 intergenic not near genes chrX_14_19045001 chrX_19045001 RAL-850 3938 chrX 19060366 19060428 chrX 19065200 19065262 Doc 15 4833 5.5 13.0 9.2 1.5 4896 chrX 19060366 intron CG14190 + chrX 19062814 intron CG14190 + chrX 19065262 intron CG14190 + chrX_15_19060001 chrX_19060001 RAL-850 3939 chrX 19071223 19071276 chrX 19071336 19071403 30 125 9.0 11.0 10.0 2.7 180 chrX 19071223 intergenic not near genes chrX 19071313 intergenic not near genes chrX 19071403 intergenic not near genes chrX_30_19070001 chrX_19070001 RAL-850 3940 chrX 19073639 19073663 chrX 19073776 19073800 11 137 21.0 7.5 14.2 0.7 161 chrX 19073639 intergenic not near genes chrX 19073720 intergenic not near genes chrX 19073800 intergenic not near genes chrX_11_19070001 chrX_19070001 RAL-850 3941 chrX 19073668 19073692 chrX 19073772 19073829 12 132 13.5 6.0 9.8 1.1 161 chrX 19073668 intergenic not near genes chrX 19073748 intergenic not near genes chrX 19073829 intergenic not near genes chrX_12_19070001 chrX_19070001 RAL-850 3942 chrX 19098730 19098776 chrX 19098858 19098904 20 128 0.0 8.0 4.0 4.0 174 chrX 19098730 intergenic not near genes chrX 19098817 intergenic not near genes chrX 19098904 intergenic not near genes chrX_20_19095001 chrX_19095001 RAL-850 3943 chrX 19106778 19106801 chrX 19106904 19106922 7 122 10.5 6.0 8.2 0.8 144 chrX 19106778 intergenic not near genes chrX 19106850 intergenic not near genes chrX 19106922 intergenic not near genes chrX_7_19105001 chrX_19105001 RAL-850 3944 chrX 19119653 19119675 chrX 19119789 19119811 6 136 4.5 0.0 2.2 1.9 158 chrX 19119653 intergenic not near genes chrX 19119732 intergenic not near genes chrX 19119811 intergenic not near genes chrX_6_19115001 chrX_19115001 RAL-850 3945 chrX 19125632 19125638 chrX 19125766 19125772 5 133 22.5 6.5 14.5 0.3 140 chrX 19125632 exon tgy - chrX 19125702 intron tgy - chrX 19125772 intron tgy - chrX_5_19125001 chrX_19125001 RAL-850 3946 chrX 19125639 19125695 chrX 19125763 19125829 31 131 10.0 6.0 8.0 3.4 190 chrX 19125639 exon tgy - chrX 19125734 intron tgy - chrX 19125829 intron tgy - chrX_31_19125001 chrX_19125001 RAL-850 3947 chrX 19136505 19136582 chrX 19143475 19143526 412 24 6965 9.0 1.5 5.2 3.9 7021 chrX 19136505 intergenic not near genes chrX 19140016 intergenic not near genes chrX 19143526 3` UTR RhoGAP18B - chrX_24_19140001 chrX_19140001 RAL-850 3948 chrX 19185500 19185562 chrX 19185646 19185708 9 146 0.0 5.5 2.8 2.4 208 chrX 19185500 intron CG33253 + chrX 19185604 intron CG33253 + chrX 19185708 exon CG33253 + chrX_9_19185001 chrX_19185001 RAL-850 3949 chrX 19280965 19280974 chrX 19281129 19281138 5 164 7.5 0.0 3.8 1.0 173 chrX 19280965 intergenic CG8034 - chrX 19281052 intergenic CG8034 - chrX 19281138 intergenic CG8034 - chrX_5_19280001 chrX_19280001 RAL-850 3950 chrX 19356951 19357019 chrX 19358441 19358528 NOF 15 1503 6.5 0.5 3.5 3.3 1577 chrX 19356951 intron kek5 + chrX 19357740 intron kek5 + chrX 19358528 intron kek5 + chrX_15_19355001 chrX_19355001 RAL-850 3951 chrX 19380113 19380181 chrX 19380404 19380471 pogo 29 290 12.0 6.0 9.0 2.9 358 chrX 19380113 intron kek5 + chrX 19380292 intron kek5 + chrX 19380471 intron kek5 + chrX_29_19380001 chrX_19380001 RAL-850 3952 chrX 19430501 19430554 chrX 19430637 19430702 17 147 1.0 4.5 2.8 4.5 201 chrX 19430501 intron kek5 + chrX 19430602 intron kek5 + chrX 19430702 intron kek5 + chrX_17_19430001 chrX_19430001 RAL-850 3953 chrX 19447044 19447109 chrX 19447353 19447418 18 308 7.0 6.5 6.8 2.3 374 chrX 19447044 intron kek5 + chrX 19447231 intron kek5 + chrX 19447418 intron kek5 + chrX_18_19445001 chrX_19445001 RAL-850 3954 chrX 19459950 19460024 chrX 19460102 19460162 14 142 0.0 4.0 2.0 4.7 212 chrX 19459950 intron kek5 + chrX 19460056 intron kek5 + chrX 19460162 intron kek5 + chrX_14_19460001 chrX_19460001 RAL-850 3955 chrX 19472097 19472109 chrX 19472701 19472729 jockey 7 617 12.0 10.5 11.2 0.6 632 chrX 19472097 intergenic kek5 + chrX 19472413 intergenic kek5 + chrX 19472729 intergenic not near genes chrX_7_19470001 chrX_19470001 RAL-850 3956 chrX 19472112 19472123 chrX 19472694 19472742 jockey 7 612 9.0 8.0 8.5 0.7 630 chrX 19472112 intergenic kek5 + chrX 19472427 intergenic not near genes chrX 19472742 intergenic not near genes chrX_7_19470001 chrX_19470001 RAL-850 3957 chrX 19472125 19472153 chrX 19472692 19472747 jockey 9 596 5.0 7.5 6.2 1.2 622 chrX 19472125 intergenic kek5 + chrX 19472436 intergenic not near genes chrX 19472747 intergenic not near genes chrX_9_19470001 chrX_19470001 RAL-850 3958 chrX 19520303 19520317 chrX 19520456 19520470 4 153 12.0 6.0 9.0 0.4 167 chrX 19520303 intron l(1)G0156 - chrX 19520386 intron l(1)G0156 - chrX 19520470 intron l(1)G0156 - chrX_4_19520001 chrX_19520001 RAL-850 3959 chrX 19532822 19532846 chrX 19532946 19532961 7 120 3.5 13.0 8.2 0.8 139 chrX 19532822 3` UTR CG32532 - chrX 19532892 3` UTR CG32532 - chrX 19532961 3` UTR CG32532 - chrX_7_19530001 chrX_19530001 RAL-850 3960 chrX 19710032 19710035 chrX 19711867 19711871 S-element 4 1836 20.5 14.0 17.2 0.2 1839 chrX 19710032 intron meso18E - chrX 19710952 intron meso18E - chrX 19711871 intron meso18E - chrX_4_19710001 chrX_19710001 RAL-850 3961 chrX 19710036 19710094 chrX 19711861 19711930 S-element 27 1832 7.0 12.0 9.5 2.6 1894 chrX 19710036 intron meso18E - chrX 19710983 intron meso18E - chrX 19711930 intron meso18E - chrX_27_19710001 chrX_19710001 RAL-850 3962 chrX 19754530 19754575 chrX 19754657 19754702 7 124 10.5 9.0 9.8 0.6 172 chrX 19754530 intron Pmp70 + chrX 19754616 intron Pmp70 + chrX 19754702 intron Pmp70 + chrX_7_19750001 chrX_19750001 RAL-850 3963 chrX 19784758 19784810 chrX 19784887 19784939 14 120 11.0 4.5 7.8 1.6 181 chrX 19784758 intergenic not near genes chrX 19784848 intergenic not near genes chrX 19784939 intergenic not near genes chrX_14_19780001 chrX_19780001 RAL-850 3964 chrX 19784815 19784831 chrX 19784881 19784961 9 107 10.0 5.5 7.8 1.0 146 chrX 19784815 intergenic not near genes chrX 19784888 intergenic not near genes chrX 19784961 intergenic not near genes chrX_9_19780001 chrX_19780001 RAL-850 3965 chrX 19797309 19797336 chrX 19804672 19804699 Stalker4 16 7360 16.0 9.5 12.8 1.2 7390 chrX 19797309 intergenic not near genes chrX 19801004 intergenic not near genes chrX 19804699 intergenic not near genes chrX_16_19800001 chrX_19800001 RAL-850 3966 chrX 19822793 19822856 chrX 19822996 19823073 30 212 6.0 7.5 6.8 3.8 280 chrX 19822793 intergenic not near genes chrX 19822933 intergenic skpE - chrX 19823073 intergenic skpE - chrX_30_19820001 chrX_19820001 RAL-850 3967 chrX 19827309 19827372 chrX 19827437 19827500 17 128 10.0 10.5 10.2 1.5 191 chrX 19827309 intergenic not near genes chrX 19827404 intergenic not near genes chrX 19827500 intergenic not near genes chrX_17_19825001 chrX_19825001 RAL-850 3968 chrX 19881413 19881478 chrX 19881544 19881599 30 129 8.5 9.0 8.8 3.1 186 chrX 19881413 intron Hers + chrX 19881506 intron Hers + chrX 19881599 intron Hers + chrX_30_19880001 chrX_19880001 RAL-850 3969 chrX 19884045 19884094 chrX 19884170 19884214 9 114 7.5 8.0 7.8 1.0 169 chrX 19884045 intron Hers + chrX 19884130 intron Hers + chrX 19884214 intron Hers + chrX_9_19880001 chrX_19880001 RAL-850 3970 chrX 19884095 19884113 chrX 19884165 19884198 4 83 8.0 6.5 7.2 0.5 103 chrX 19884095 intron Hers + chrX 19884146 intron Hers + chrX 19884198 intron Hers + chrX_4_19880001 chrX_19880001 RAL-850 3971 chrX 19897341 19897407 chrX 19897468 19897534 42 127 7.5 10.0 8.8 4.3 193 chrX 19897341 intron Hers + chrX 19897438 intron Hers + chrX 19897534 intron Hers + chrX_42_19895001 chrX_19895001 RAL-850 3972 chrX 19971774 19971826 chrX 19971901 19971953 16 127 7.5 10.5 9.0 1.6 179 chrX 19971774 intergenic not near genes chrX 19971864 intergenic not near genes chrX 19971953 intergenic not near genes chrX_16_19970001 chrX_19970001 RAL-850 3973 chrX 19983847 19983872 chrX 19983977 19984002 5 130 0.0 2.0 1.0 2.5 155 chrX 19983847 intergenic not near genes chrX 19983924 intergenic not near genes chrX 19984002 intergenic not near genes chrX_5_19980001 chrX_19980001 RAL-850 3974 chrX 20041481 20041552 chrX 20041611 20041682 26 130 3.0 1.5 2.2 8.1 201 chrX 20041481 intron Dop2R - chrX 20041582 intron Dop2R - chrX 20041682 intron Dop2R - chrX_26_20040001 chrX_20040001 RAL-850 3975 chrX 20046590 20046627 chrX 20046722 20046749 9 130 10.0 6.5 8.2 1.0 159 chrX 20046590 intron Dop2R - chrX 20046670 intron Dop2R - chrX 20046749 intron Dop2R - chrX_9_20045001 chrX_20045001 RAL-850 3976 chrX 20046629 20046664 chrX 20046715 20046755 17 106 5.5 4.5 5.0 2.8 126 chrX 20046629 intron Dop2R - chrX 20046692 intron Dop2R - chrX 20046755 intron Dop2R - chrX_17_20045001 chrX_20045001 RAL-850 3977 chrX 20052739 20052815 chrX 20052872 20052925 27 131 9.0 3.5 6.2 3.8 186 chrX 20052739 intron Dop2R - chrX 20052832 intron Dop2R - chrX 20052925 intron Dop2R - chrX_27_20050001 chrX_20050001 RAL-850 3978 chrX 20069220 20069240 chrX 20069403 20069423 9 181 26.5 13.5 20.0 0.4 203 chrX 20069220 intergenic not near genes chrX 20069322 intergenic not near genes chrX 20069423 intergenic not near genes chrX_9_20065001 chrX_20065001 RAL-850 3979 chrX 20069242 20069287 chrX 20069399 20069470 21 177 10.5 13.0 11.8 1.6 228 chrX 20069242 intergenic not near genes chrX 20069356 intergenic not near genes chrX 20069470 intergenic not near genes chrX_21_20065001 chrX_20065001 RAL-850 3980 chrX 20082711 20082782 chrX 20082844 20082888 20 130 8.0 6.0 7.0 2.5 177 chrX 20082711 intergenic not near genes chrX 20082800 intergenic not near genes chrX 20082888 intergenic not near genes chrX_20_20080001 chrX_20080001 RAL-850 3981 chrX 20126837 20126910 chrX 20126966 20127007 18 114 6.0 7.5 6.8 2.3 170 chrX 20126837 intergenic not near genes chrX 20126922 intergenic not near genes chrX 20127007 intergenic not near genes chrX_18_20125001 chrX_20125001 RAL-850 3982 chrX 20132258 20132289 chrX 20132391 20132421 15 133 12.0 7.0 9.5 1.4 163 chrX 20132258 intergenic not near genes chrX 20132340 intergenic not near genes chrX 20132421 intergenic not near genes chrX_15_20130001 chrX_20130001 RAL-850 3983 chrX 20144278 20144315 chrX 20144408 20144445 17 130 5.0 11.5 8.2 1.8 167 chrX 20144278 intergenic not near genes chrX 20144362 intergenic not near genes chrX 20144445 intergenic not near genes chrX_17_20140001 chrX_20140001 RAL-850 3984 chrX 20144442 20144455 chrX 21085287 21085300 INE-1 8 940845 11.5 36.5 24.0 0.3 940858 chrX 20144442 intergenic not near genes chrX 20614871 intron RunxA - chrX 21085300 intergenic not near genes chrX_8_20610001 chrX_20610001 RAL-850 3985 chrX 20271455 20271526 chrX 20271597 20271663 16 141 9.5 0.0 4.8 2.8 208 chrX 20271455 intergenic not near genes chrX 20271559 intergenic not near genes chrX 20271663 intergenic not near genes chrX_16_20270001 chrX_20270001 RAL-850 3986 chrX 20312836 20312911 chrX 20312964 20313039 30 128 5.0 6.5 5.8 4.4 203 chrX 20312836 intron CG1504 - chrX 20312938 intron CG1504 - chrX 20313039 intron CG1504 - chrX_30_20310001 chrX_20310001 RAL-850 3987 chrX 20320254 20320300 chrX 20320381 20320427 21 127 5.0 4.0 4.5 3.8 173 chrX 20320254 intron CG1504 - chrX 20320340 intron CG1504 - chrX 20320427 intron CG1504 - chrX_21_20320001 chrX_20320001 RAL-850 3988 chrX 20358792 20358859 chrX 20358926 20358993 21 132 4.5 6.5 5.5 3.2 201 chrX 20358792 intergenic not near genes chrX 20358892 intergenic not near genes chrX 20358993 intergenic not near genes chrX_21_20355001 chrX_20355001 RAL-850 3989 chrX 20387239 20387293 chrX 20387385 20387435 25 143 6.5 9.5 8.0 2.8 196 chrX 20387239 intergenic not near genes chrX 20387337 intergenic not near genes chrX 20387435 intergenic not near genes chrX_25_20385001 chrX_20385001 RAL-850 3990 chrX 20415016 20415081 chrX 20415147 20415221 8 138 0.0 0.0 0.0 8.0 205 chrX 20415016 intergenic not near genes chrX 20415118 intergenic not near genes chrX 20415221 intergenic not near genes chrX_8_20415001 chrX_20415001 RAL-850 3991 chrX 20427096 20427124 chrX 20427273 20427301 10 177 43.0 37.5 40.2 0.2 205 chrX 20427096 intergenic CG15456 -,CG11710 - chrX 20427198 intergenic CG15456 -,CG11710 - chrX 20427301 intergenic CG11710 -,CG15456 - chrX_10_20425001 chrX_20425001 RAL-850 3992 chrX 20426177 20426242 chrX 20428354 20428401 17 2167 70.5 57.0 63.8 0.3 2224 chrX 20426177 exon cactin + chrX 20427289 intergenic CG11710 -,CG15456 - chrX 20428401 exon CG11710 - chrX_17_20425001 chrX_20425001 RAL-850 3993 chrX 20443160 20443202 chrX 20443286 20443328 16 126 8.5 10.5 9.5 1.5 168 chrX 20443160 exon CG1695 + chrX 20443244 intron CG1695 + chrX 20443328 intron CG1695 + chrX_16_20440001 chrX_20440001 RAL-850 3994 chrX 20447120 20447138 chrX 20447251 20447269 7 131 10.5 16.0 13.2 0.5 149 chrX 20447120 intergenic CG42578 + chrX 20447194 intergenic CG42578 + chrX 20447269 intergenic not near genes chrX_7_20445001 chrX_20445001 RAL-850 3995 chrX 20504086 20504153 chrX 20505657 20505704 transib2 19 1568 7.5 8.5 8.0 2.1 1618 chrX 20504086 intron RhoGAP19D - chrX 20504895 intron RhoGAP19D - chrX 20505704 intron RhoGAP19D - chrX_19_20500001 chrX_20500001 RAL-850 3996 chrX 20526314 20526473 chrX 20526543 20526614 10 168 4.0 0.0 2.0 3.3 300 chrX 20526314 intergenic not near genes chrX 20526464 intergenic not near genes chrX 20526614 intergenic not near genes chrX_10_20525001 chrX_20525001 RAL-850 3997 chrX 20528557 20528622 chrX 20528955 20529005 27 397 7.5 11.5 9.5 2.6 448 chrX 20528557 intergenic not near genes chrX 20528781 intergenic not near genes chrX 20529005 intergenic not near genes chrX_27_20525001 chrX_20525001 RAL-850 3998 chrX 20531644 20531678 chrX 20531784 20531818 12 139 14.0 11.5 12.8 0.9 174 chrX 20531644 intergenic not near genes chrX 20531731 intergenic not near genes chrX 20531818 intergenic not near genes chrX_12_20530001 chrX_20530001 RAL-850 3999 chrX 20539441 20539508 chrX 20539829 20539896 24 385 3.0 6.0 4.5 4.4 455 chrX 20539441 intron RunxB + chrX 20539668 intron RunxB + chrX 20539896 intron RunxB + chrX_24_20535001 chrX_20535001 RAL-850 4000 chrX 20546499 20546561 chrX 20546715 20546777 19 213 5.0 4.0 4.5 3.5 278 chrX 20546499 intron RunxB + chrX 20546638 intron RunxB + chrX 20546777 intron RunxB + chrX_19_20545001 chrX_20545001 RAL-850 4001 chrX 20635391 20635444 chrX 20635607 20635660 19 216 5.0 6.5 5.8 2.8 269 chrX 20635391 intergenic not near genes chrX 20635526 intergenic not near genes chrX 20635660 intergenic not near genes chrX_19_20635001 chrX_20635001 RAL-850 4002 chrX 20662271 20662341 chrX 20662404 20662469 21 129 7.5 5.0 6.2 2.9 198 chrX 20662271 intron CG1835 + chrX 20662370 intron CG1835 + chrX 20662469 intron CG1835 + chrX_21_20660001 chrX_20660001 RAL-850 4003 chrX 20710411 20710423 chrX 20710538 20710550 6 127 5.0 1.0 3.0 1.5 139 chrX 20710411 intergenic not near genes chrX 20710480 intergenic not near genes chrX 20710550 intergenic not near genes chrX_6_20710001 chrX_20710001 RAL-850 4004 chrX 20836676 20836695 chrX 20844328 20844347 roo 8 7652 7.5 5.5 6.5 1.1 7671 chrX 20836676 intron shakB - chrX 20840512 intron shakB - chrX 20844347 intron shakB - chrX_8_20840001 chrX_20840001 RAL-850 4005 chrX 20836698 20836740 chrX 20844326 20844392 roo 13 7650 3.5 5.0 4.2 2.5 7694 chrX 20836698 intron shakB - chrX 20840545 intron shakB - chrX 20844392 intron shakB - chrX_13_20840001 chrX_20840001 RAL-850 4006 chrX 20874779 20874831 chrX 20874904 20874967 15 132 9.5 5.0 7.2 1.8 188 chrX 20874779 intron shakB - chrX 20874873 intron shakB - chrX 20874967 intron shakB - chrX_15_20870001 chrX_20870001 RAL-850 4007 chrX 20940681 20940735 chrX 20942200 20942234 hobo 13 1516 10.5 6.0 8.2 1.4 1553 chrX 20940681 intergenic not near genes chrX 20941458 intergenic not near genes chrX 20942234 intergenic not near genes chrX_13_20940001 chrX_20940001 RAL-850 4008 chrX 20956924 20956951 chrX 20962419 20962446 I-element 12 5495 0.0 3.5 1.8 4.3 5522 chrX 20956924 intergenic not near genes chrX 20959685 intergenic not near genes chrX 20962446 intergenic Ser6 - chrX_12_20955001 chrX_20955001 RAL-850 4009 chrX 20974155 20974201 chrX 20974389 20974435 15 233 4.5 10.0 7.2 1.8 280 chrX 20974155 intergenic not near genes chrX 20974295 intergenic not near genes chrX 20974435 intergenic not near genes chrX_15_20970001 chrX_20970001 RAL-850 4010 chrX 21008608 21008684 chrX 21008746 21008822 20 138 7.5 5.5 6.5 2.7 214 chrX 21008608 intergenic not near genes chrX 21008715 intergenic not near genes chrX 21008822 intergenic not near genes chrX_20_21005001 chrX_21005001 RAL-850 4011 chrX 21022183 21022233 chrX 21022401 21022452 21 219 9.0 7.0 8.0 2.3 269 chrX 21022183 intergenic not near genes chrX 21022318 intergenic not near genes chrX 21022452 intergenic not near genes chrX_21_21020001 chrX_21020001 RAL-850 4012 chrX 21029106 21029180 chrX 21029373 21029411 11 258 1.5 6.5 4.0 2.2 305 chrX 21029106 3` UTR CG1529 - chrX 21029258 3` UTR CG1529 - chrX 21029411 3` UTR CG1529 - chrX_11_21025001 chrX_21025001 RAL-850 4013 chrX 21032268 21032285 chrX 21032410 21032427 10 140 4.0 15.5 9.8 0.9 159 chrX 21032268 intergenic CG1529 - chrX 21032348 intergenic CG1529 - chrX 21032427 intergenic CG1529 - chrX_10_21030001 chrX_21030001 RAL-850 4014 chrX 21042563 21042613 chrX 21045308 21045348 13 2738 52.5 57.0 54.8 0.2 2785 chrX 21042563 exon Mgstl + chrX 21043956 exon,3` UTR Mgstl +,CR44431 - chrX 21045348 5` UTR Cbs + chrX_13_21040001 chrX_21040001 RAL-850 4015 chrX 21042559 21042604 chrX 21045349 21045364 6 2764 50.0 54.5 52.2 0.1 2805 chrX 21042559 exon Mgstl + chrX 21043962 exon,3` UTR Mgstl +,CR44431 - chrX 21045364 intron Cbs + chrX_6_21040001 chrX_21040001 RAL-850 4016 chrX 21067748 21067807 chrX 21067894 21067953 14 146 8.0 14.0 11.0 1.2 205 chrX 21067748 intron bves + chrX 21067850 intron bves + chrX 21067953 intron bves + chrX_14_21065001 chrX_21065001 RAL-850 4017 chrX 21076279 21076335 chrX 21076408 21076464 19 128 11.5 1.0 6.2 2.6 185 chrX 21076279 intron bves + chrX 21076372 intron bves + chrX 21076464 intron bves + chrX_19_21075001 chrX_21075001 RAL-850 4018 chrX 21078721 21078776 chrX 21078849 21078904 22 126 7.5 1.0 4.2 4.2 183 chrX 21078721 intron bves + chrX 21078812 intron bves + chrX 21078904 intron bves + chrX_22_21075001 chrX_21075001 RAL-850 4019 chrX 20144570 20144586 chrX 21085233 21085249 4 940663 24.0 39.0 31.5 0.1 940679 chrX 20144570 intergenic not near genes chrX 20614910 intron RunxA - chrX 21085249 intergenic not near genes chrX_4_20610001 chrX_20610001 RAL-850 4020 chrX 21086092 21086150 chrX 21087171 21087229 jockey 18 1079 7.5 12.5 10.0 1.6 1137 chrX 21086092 intergenic not near genes chrX 21086660 intergenic not near genes chrX 21087229 intergenic not near genes chrX_18_21085001 chrX_21085001 RAL-850 4021 chrX 21088002 21088017 chrX 21088184 21088199 4 182 16.0 6.5 11.2 0.3 197 chrX 21088002 intergenic not near genes chrX 21088100 intergenic not near genes chrX 21088199 intergenic not near genes chrX_4_21085001 chrX_21085001 RAL-850 4022 chrX 21088019 21088054 chrX 21088180 21088236 10 179 9.5 5.5 7.5 1.2 217 chrX 21088019 intergenic not near genes chrX 21088128 intergenic not near genes chrX 21088236 intergenic not near genes chrX_10_21085001 chrX_21085001 RAL-850 4023 chrX 21089108 21089167 chrX 21089252 21089311 19 144 11.0 15.5 13.2 1.3 203 chrX 21089108 intergenic not near genes chrX 21089210 intergenic not near genes chrX 21089311 intergenic not near genes chrX_19_21085001 chrX_21085001 RAL-850 4024 chrX 21092613 21092679 chrX 21092741 21092776 22 122 8.5 5.5 7.0 2.8 163 chrX 21092613 intergenic not near genes chrX 21092694 intergenic not near genes chrX 21092776 intergenic not near genes chrX_22_21090001 chrX_21090001 RAL-850 4025 chrX 21222020 21222101 chrX 21222155 21222235 24 134 3.0 6.0 4.5 4.4 215 chrX 21222020 intron CG32521 - chrX 21222128 intron CG32521 - chrX 21222235 intron CG32521 - chrX_24_21220001 chrX_21220001 RAL-850 4026 chrX 21250326 21250379 chrX 21250434 21250507 22 119 5.5 10.0 7.8 2.5 181 chrX 21250326 intron,exon CG32521 -,CG1722 - chrX 21250416 intron,exon CG32521 -,CG1722 - chrX 21250507 intron,exon CG32521 -,CG1722 - chrX_22_21250001 chrX_21250001 RAL-850 4027 chrX 21255444 21255498 chrX 21255619 21255644 14 173 6.5 0.0 3.2 3.3 200 chrX 21255444 intron CG32521 - chrX 21255544 intron CG32521 - chrX 21255644 intron CG32521 - chrX_14_21255001 chrX_21255001 RAL-850 4028 chrX 21268025 21268078 chrX 21268156 21268209 24 130 9.5 7.0 8.2 2.6 184 chrX 21268025 intron CG32521 - chrX 21268117 intron CG32521 - chrX 21268209 intron CG32521 - chrX_24_21265001 chrX_21265001 RAL-850 4029 chrX 21308830 21308869 chrX 21308986 21309045 5 168 12.5 0.0 6.2 0.7 215 chrX 21308830 exon CG1801 - chrX 21308938 intron CG1801 - chrX 21309045 intron CG1801 - chrX_5_21305001 chrX_21305001 RAL-850 4030 chrX 21328073 21328147 chrX 21328234 21328309 27 161 4.5 7.5 6.0 3.9 236 chrX 21328073 3` UTR CG1486 + chrX 21328191 intergenic CG1486 +,tty - chrX 21328309 intergenic CG1486 +,tty - chrX_27_21325001 chrX_21325001 RAL-850 4031 chrX 21410629 21410664 chrX 21410758 21410793 11 127 0.0 9.0 4.5 2.0 164 chrX 21410629 intergenic CR45003 - chrX 21410711 intergenic CR45003 - chrX 21410793 intergenic CR45003 - chrX_11_21410001 chrX_21410001 RAL-850 4032 chrX 21419168 21419225 chrX 21419303 21419360 17 135 13.5 7.5 10.5 1.5 192 chrX 21419168 intergenic not near genes chrX 21419264 intergenic not near genes chrX 21419360 intergenic not near genes chrX_17_21415001 chrX_21415001 RAL-850 4033 chrX 21427391 21427408 chrX 21427588 21427606 5 197 15.0 7.0 11.0 0.4 215 chrX 21427391 intron CG42343 - chrX 21427498 intron CG42343 - chrX 21427606 intron CG42343 - chrX_5_21425001 chrX_21425001 RAL-850 4034 chrX 21455193 21455242 chrX 21455430 21455463 20 232 6.0 7.0 6.5 2.7 270 chrX 21455193 intron CG42343 - chrX 21455328 intron CG42343 - chrX 21455463 intron CG42343 - chrX_20_21455001 chrX_21455001 RAL-850 4035 chrX 21458655 21458712 chrX 21464141 21464198 Ivk 20 5485 11.5 7.0 9.2 2.0 5543 chrX 21458655 intergenic not near genes chrX 21461426 intergenic not near genes chrX 21464198 intergenic not near genes chrX_20_21460001 chrX_21460001 RAL-850 4036 chrX 21595523 21595561 chrX 21598646 21598684 micropia 18 3123 5.5 8.5 7.0 2.2 3161 chrX 21595523 intergenic not near genes chrX 21597104 intergenic not near genes chrX 21598684 intergenic not near genes chrX_18_21595001 chrX_21595001 RAL-850 4037 chrX 21668214 21668287 chrX 21668349 21668422 24 135 55.5 42.0 48.8 0.5 208 chrX 21668214 intergenic not near genes chrX 21668318 intergenic not near genes chrX 21668422 intergenic not near genes chrX_24_21665001 chrX_21665001 RAL-850 4038 chrX 22448220 22448267 chrX 22448409 22448456 12 189 10.0 4.5 7.2 1.5 236 chrX 22448220 intron CG14615 - chrX 22448338 intron CG14615 - chrX 22448456 intron CG14615 - chrX_12_22445001 chrX_22445001 RAL-850 4039 chrX 22448269 22448294 chrX 22448408 22448482 10 184 6.5 4.5 5.5 1.5 213 chrX 22448269 intron CG14615 - chrX 22448376 intron CG14615 - chrX 22448482 intron CG14615 - chrX_10_22445001 chrX_22445001 RAL-850 4040 chrX 22478874 22478880 chrX 22479052 22479063 7 182 0.0 12.0 6.0 1.0 189 chrX 22478874 intron CG12576 - chrX 22478968 intron CG12576 - chrX 22479063 intron CG12576 - chrX_7_22475001 chrX_22475001 RAL-850 4041 chrX 22492437 22492458 chrX 22493000 22493021 8 562 11.0 9.0 10.0 0.7 584 chrX 22492437 intron l(1)G0196 + chrX 22492729 intron l(1)G0196 + chrX 22493021 intron l(1)G0196 + chrX_8_22490001 chrX_22490001 RAL-850 4042 chrX 22492465 22492509 chrX 22492998 22493072 11 560 4.5 9.0 6.8 1.4 607 chrX 22492465 intron l(1)G0196 + chrX 22492768 intron l(1)G0196 + chrX 22493072 intron l(1)G0196 + chrX_11_22490001 chrX_22490001 RAL-850 4043 chrX 22522589 22522660 chrX 22525459 22525530 NOF 13 2870 10.5 5.0 7.8 1.5 2941 chrX 22522589 intron CG17600 + chrX 22524060 intron CG17600 + chrX 22525530 intron CG17600 + chrX_13_22520001 chrX_22520001 RAL-850 4044 chrX 22559918 22559923 chrX 22560085 22560090 4 167 3.5 7.0 5.2 0.6 172 chrX 22559918 intergenic not near genes chrX 22560004 intergenic not near genes chrX 22560090 intergenic not near genes chrX_4_22560001 chrX_22560001 RAL-850 4045 chrX 22584286 22584356 chrX 22584427 22584497 15 138 6.5 7.0 6.8 1.9 211 chrX 22584286 exon Cda4 - chrX 22584392 intron Cda4 - chrX 22584497 intron Cda4 - chrX_15_22580001 chrX_22580001 RAL-850 4046 chrX 22585455 22585525 chrX 22585588 22585658 18 133 6.0 3.0 4.5 3.3 203 chrX 22585455 intron Cda4 - chrX 22585556 intron Cda4 - chrX 22585658 intron Cda4 - chrX_18_22585001 chrX_22585001 RAL-850 4047 chrX 22585885 22585921 chrX 22586015 22586057 14 135 0.0 6.0 3.0 3.5 172 chrX 22585885 intron Cda4 - chrX 22585971 intron Cda4 - chrX 22586057 intron Cda4 - chrX_14_22585001 chrX_22585001 RAL-850 4048 chrX 22620454 22620503 chrX 22626772 22626819 297 9 6318 5.5 7.5 6.5 1.2 6365 chrX 22620454 intron Cda4 - chrX 22623636 intron Cda4 - chrX 22626819 intron Cda4 - chrX_9_22620001 chrX_22620001 RAL-850 4049 chrX 22642519 22642592 chrX 22642653 22642726 13 134 6.5 0.0 3.2 3.1 207 chrX 22642519 intergenic not near genes chrX 22642622 intergenic not near genes chrX 22642726 intergenic not near genes chrX_13_22640001 chrX_22640001 RAL-850 4050 chrX 22660535 22660604 chrX 22660669 22660738 11 133 6.5 7.5 7.0 1.4 203 chrX 22660535 intron CR44997 + chrX 22660636 intron CR44997 + chrX 22660738 intron CR44997 + chrX_11_22660001 chrX_22660001 RAL-850 4051 chrX 22697462 22697512 chrX 22701809 22701859 Juan 25 4347 11.0 12.5 11.8 2.0 4397 chrX 22697462 intron CR44997 + chrX 22699660 intron CR44997 + chrX 22701859 intron CR44997 + chrX_25_22695001 chrX_22695001 RAL-850 4052 chrX 22734412 22734451 chrX 22734541 22734580 14 128 3.5 6.0 4.8 2.4 168 chrX 22734412 intron CR44997 + chrX 22734496 intron CR44997 + chrX 22734580 intron CR44997 + chrX_14_22730001 chrX_22730001 RAL-850 4053 chrX 22771466 22771533 chrX 22774802 22774839 297 19 3336 6.0 5.0 5.5 2.9 3373 chrX 22771466 intron CR44997 + chrX 22773152 intron CR44997 + chrX 22774839 intron CR44997 + chrX_19_22770001 chrX_22770001 RAL-850 4054 chrX 22824224 22824436 chrX 22824400 22824619 32 180 0.0 0.0 0.0 32.0 395 chrX 22824224 intergenic fog - chrX 22824422 3` UTR fog - chrX 22824619 3` UTR fog - chrX_32_22820001 chrX_22820001 RAL-850 4055 chrX 22835921 22835981 chrX 22836058 22836100 20 129 10.5 12.0 11.2 1.6 179 chrX 22835921 intron,intron fog -,CG42346 + chrX 22836010 intron,intron fog -,CG42346 + chrX 22836100 intron,intron fog -,CG42346 + chrX_20_22835001 chrX_22835001 RAL-850 4056 chrX 22844494 22844522 chrX 22844631 22844659 7 137 4.5 6.0 5.2 1.1 165 chrX 22844494 intron,intron fog -,CG42346 + chrX 22844576 intron,intron fog -,CG42346 + chrX 22844659 intron,intron fog -,CG42346 + chrX_7_22840001 chrX_22840001 RAL-850 4057 chrX 22867942 22868005 chrX 22868099 22868177 20 168 4.5 7.0 5.8 2.9 235 chrX 22867942 exon CG42346 + chrX 22868060 intron CG42346 + chrX 22868177 intron CG42346 + chrX_20_22865001 chrX_22865001 RAL-850 4058 chrX 22891105 22891116 chrX 22891238 22891249 5 132 4.0 4.0 4.0 1.0 144 chrX 22891105 intergenic not near genes chrX 22891177 intergenic not near genes chrX 22891249 intergenic not near genes chrX_5_22890001 chrX_22890001 RAL-850 4059 chrX 22916114 22916205 chrX 22916312 22916366 20 187 0.0 6.5 3.2 4.8 252 chrX 22916114 intergenic not near genes chrX 22916240 intergenic not near genes chrX 22916366 intergenic not near genes chrX_20_22915001 chrX_22915001 RAL-850 4060 chrX 22922475 22922542 chrX 22922605 22922627 11 125 2.5 6.5 4.5 2.0 152 chrX 22922475 intergenic not near genes chrX 22922551 intergenic not near genes chrX 22922627 intergenic not near genes chrX_11_22920001 chrX_22920001 RAL-850 4061 chrX 22960780 22960796 chrX 22961032 22961048 5 252 0.0 4.5 2.2 1.6 268 chrX 22960780 3` UTR CG40485 - chrX 22960914 3` UTR CG40485 - chrX 22961048 3` UTR CG40485 - chrX_5_22960001 chrX_22960001 RAL-850 4062 chrX 22987078 22987121 chrX 22989771 22989830 Burdock 7 2707 4.5 6.0 5.2 1.1 2752 chrX 22987078 intron,intron stnA -,stnB - chrX 22988454 intron,intron stnA -,stnB - chrX 22989830 intron,intron stnA -,stnB - chrX_7_22985001 chrX_22985001 RAL-850 4063 chrX 22992352 22992418 chrX 22992533 22992599 11 177 5.0 7.0 6.0 1.6 247 chrX 22992352 intron,intron stnA -,stnB - chrX 22992476 intron,intron stnA -,stnB - chrX 22992599 3` UTR,exon stnA -,stnB - chrX_11_22990001 chrX_22990001 RAL-850 4064 chrX 22996269 22996333 chrX 23003551 23003615 roo 17 7281 8.0 12.5 10.2 1.5 7346 chrX 22996269 intron,intron stnA -,stnB - chrX 22999942 intron,intron stnA -,stnB - chrX 23003615 intron,intron stnA -,stnB - chrX_17_22995001 chrX_22995001 RAL-850 4065 chrX 23036341 23036408 chrX 23037792 23037859 pogo 22 1451 7.5 7.0 7.2 2.7 1518 chrX 23036341 intron CG12061 + chrX 23037100 intron CG12061 + chrX 23037859 intron CG12061 + chrX_22_23035001 chrX_23035001 RAL-850 4066 chrX 22892421 22892430 chrX 23039015 23039024 4 146594 16.5 20.0 18.2 0.2 146603 chrX 22892421 intergenic not near genes chrX 22965722 intergenic not near genes chrX 23039024 intron CG12061 + chrX_4_22965001 chrX_22965001 RAL-850 4067 chrX 23045206 23045251 chrX 23045338 23045385 12 128 14.5 5.0 9.8 1.1 179 chrX 23045206 intron CG12061 + chrX 23045296 intron CG12061 + chrX 23045385 intron CG12061 + chrX_12_23045001 chrX_23045001 RAL-850 4068 chrX 22967512 22967529 chrX 23154542 23154554 diver 4 187026 2.5 23.5 13.0 0.3 187042 chrX 22967512 intergenic not near genes chrX 23061033 intergenic not near genes chrX 23154554 intergenic not near genes chrX_4_23060001 chrX_23060001 RAL-850 4069 chrY 864672 864733 chrY 864799 864859 5 126 21.0 23.0 22.0 0.2 187 chrY 864672 intergenic not near genes chrY 864766 intergenic not near genes chrY 864859 intergenic not near genes chrY_5_860001 chrY_860001 RAL-850 4070 chrY 975605 975816 chrY 975751 975973 17 157 219.0 192.0 205.5 0.1 368 chrY 975605 intergenic not near genes chrY 975789 intergenic not near genes chrY 975973 intergenic not near genes chrY_17_975001 chrY_975001 RAL-850 4071 chrY 1419854 1419881 chrY 1420158 1420185 5 303 20.0 11.5 15.8 0.3 331 chrY 1419854 intergenic not near genes chrY 1420020 intergenic not near genes chrY 1420185 intergenic not near genes chrY_5_1420001 chrY_1420001 RAL-850 4072 chrY 1420449 1420476 chrY 1420851 1420878 6 402 11.0 6.0 8.5 0.6 429 chrY 1420449 intergenic not near genes chrY 1420664 intergenic not near genes chrY 1420878 intergenic not near genes chrY_6_1420001 chrY_1420001 RAL-850 4073 chrY 1420500 1420506 chrY 1420760 1420908 4 331 5.5 4.5 5.0 0.7 408 chrY 1420500 intergenic not near genes chrY 1420704 intergenic not near genes chrY 1420908 intergenic not near genes chrY_4_1420001 chrY_1420001 RAL-850 4074 chrY 1445413 1445439 chrY 1447401 1447419 5 1983 19.0 15.5 17.2 0.3 2006 chrY 1445413 intergenic not near genes chrY 1446416 intergenic not near genes chrY 1447419 intergenic not near genes chrY_5_1445001 chrY_1445001 RAL-850 4075 chrY 3561969 3562032 chrY 3562102 3562165 5 133 13.5 12.0 12.8 0.4 196 chrY 3561969 intergenic not near genes chrY 3562067 intergenic not near genes chrY 3562165 intergenic not near genes chrY_5_3560001 chrY_3560001 RAL-850 4076 chrY 3664561 3664622 chrY 3664714 3664775 4 153 0.5 0.5 0.5 2.7 214 chrY 3664561 intergenic CG40948 + chrY 3664668 intergenic CG40948 + chrY 3664775 intergenic CG40948 + chrY_4_3660001 chrY_3660001 RAL-850 4077 chrY 3664941 3664977 chrY 3665095 3665131 5 154 1.0 0.5 0.8 2.8 190 chrY 3664941 intergenic CG40948 + chrY 3665036 intergenic CG40948 + chrY 3665131 intergenic not near genes chrY_5_3665001 chrY_3665001 RAL-850